BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780386|ref|YP_003064799.1| Type I secretion membrane
fusion protein, HlyD [Candidatus Liberibacter asiaticus str. psy62]
         (440 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780386|ref|YP_003064799.1| Type I secretion membrane fusion protein, HlyD [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040063|gb|ACT56859.1| Type I secretion membrane fusion protein, HlyD [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 440

 Score =  902 bits (2330), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/440 (100%), Positives = 440/440 (100%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK
Sbjct: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL
Sbjct: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD
Sbjct: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM
Sbjct: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI
Sbjct: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE
Sbjct: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT
Sbjct: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420

Query: 421 TLAQEIIHPITDNWPKIFER 440
           TLAQEIIHPITDNWPKIFER
Sbjct: 421 TLAQEIIHPITDNWPKIFER 440


>gi|315122201|ref|YP_004062690.1| Type I secretion membrane fusion protein, HlyD [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495603|gb|ADR52202.1| Type I secretion membrane fusion protein, HlyD [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 441

 Score =  615 bits (1586), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 306/441 (69%), Positives = 363/441 (82%), Gaps = 1/441 (0%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M++  WKN K++H  +L +  +LS IGI+GLI WSILLPIEI VSS GEIL ++++VEIK
Sbjct: 1   MYNIFWKNFKKHHLTTLAKTIILSTIGIVGLIIWSILLPIEIRVSSLGEILYDNDIVEIK 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           SPFSGII KFQV NG+Q+LQG PLLTFED ET DL++LKK SI +L+C IDT  SAL+FL
Sbjct: 61  SPFSGIINKFQVNNGAQVLQGDPLLTFEDTETNDLLNLKKSSITDLKCRIDTANSALNFL 120

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           N+KYDV+++AF+ R+EQLLDFL  Y  TCSKVFNY IS +YRSLK+KLTR  ++Y N LD
Sbjct: 121 NSKYDVIKRAFDIRDEQLLDFLRNYPPTCSKVFNYEISKLYRSLKLKLTRTHNLYSNYLD 180

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE+K SL   LL SH+KDLT+ KNLF+ N VS+N+LNQQER+V+KS LEL  +++ QK M
Sbjct: 181 LEDKISLSNMLLLSHKKDLTITKNLFKDNVVSKNELNQQERVVHKSALELTTDLNAQKAM 240

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           LRHINELYDEAN+EFANYLK+ISRDL+ NQRT  DE+SK TILEK   Q TILSPI GTI
Sbjct: 241 LRHINELYDEANVEFANYLKDISRDLDHNQRTLIDEISKATILEKKISQHTILSPIMGTI 300

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           VYNQSFSSSNY Q+SQ LMKIVP   LT+IRAKV P+QIQ VK G  ATVRFPHY DIRE
Sbjct: 301 VYNQSFSSSNYIQESQLLMKIVPRCDLTHIRAKVAPQQIQSVKNGQIATVRFPHYPDIRE 360

Query: 361 KKFKAIIEKIDPIISQQDNN-LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           KKFKAIIE I+PIISQ++N+  QTQ YYEVILKI D A+ DN IELRNG+ AE+LFTA+ 
Sbjct: 361 KKFKAIIETINPIISQRNNDSSQTQNYYEVILKIIDPAYFDNKIELRNGYLAEILFTAEY 420

Query: 420 TTLAQEIIHPITDNWPKIFER 440
           TTLA+EII PIT+NWPKIFER
Sbjct: 421 TTLAKEIIRPITNNWPKIFER 441


>gi|307544060|ref|YP_003896539.1| mandelate racemase [Halomonas elongata DSM 2581]
 gi|307216084|emb|CBV41354.1| K02022 [Halomonas elongata DSM 2581]
          Length = 449

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/429 (22%), Positives = 187/429 (43%), Gaps = 45/429 (10%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           +I   G  +W++L  + ++V +SG +  E     ++    GI+ +  V++G ++ QG  L
Sbjct: 36  LIAFGGFGSWAVLASLSVTVVASGTVSVESFKKTVQHFEGGIVSRIDVDDGDRVEQGQTL 95

Query: 85  LTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA----------- 130
           +  ++ ++   +++   K  +    +  +  E+   + L     ++E+A           
Sbjct: 96  IVLDNTQSQSQLEIAQAKAFTAGAQKARLIAEQQGKETLTFPPSLVEQASGNAEREQTLA 155

Query: 131 -----FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                F SR       LG   +  S+ F   I  + ++  M + R R   LN  + ++  
Sbjct: 156 VQRSLFVSRRSSQEGELGAL-AAQSRQFREQIEGLEQN--MAINRERITSLN-AEADDYR 211

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           SL RA L ++Q+   + + + +  A S     Q          +LR  I E  N LR   
Sbjct: 212 SLFRAGLGNNQRIRELERQVMQYRADSAESKAQ--------IAQLRSRISE--NTLR--- 258

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                A ++  NY K+++  L + Q        K   L     + TI +P+AGT+V   +
Sbjct: 259 -----AQVQRQNYHKDVNEQLREAQSQLESSREKAQALSDRVRRTTITAPVAGTVVGLTT 313

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  +P+M IVP S    I A++  +++ +V  G  A +RF  +   R      
Sbjct: 314 HTIGAVIEPGKPVMHIVPSSDGFMIEARIPAQEVDNVYPGAHANIRFSAFNQRRVPVMDG 373

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           ++  +    S +D +     YY+  + ++  D     ++++L +G PAEV+      TLA
Sbjct: 374 VVRHVSA-DSFEDESTGVN-YYKARVDVSPDDREELGDDLQLLSGMPAEVMIETGKKTLA 431

Query: 424 QEIIHPITD 432
           + ++ P+TD
Sbjct: 432 EYLLQPVTD 440


>gi|152991144|ref|YP_001356866.1| type I secretion system membrane fusion protein [Nitratiruptor sp.
           SB155-2]
 gi|151423005|dbj|BAF70509.1| type I secretion system membrane fusion protein [Nitratiruptor sp.
           SB155-2]
          Length = 428

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 102/442 (23%), Positives = 195/442 (44%), Gaps = 48/442 (10%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + L   H +    + +  I G+ G+  W+    I++SV++ GE++ +     +  P  GI
Sbjct: 6   QKLTHKHVSRFGILIIFLIFGLFGI--WAAFAKIDLSVNAPGEVIVQSYKKTVMHPKGGI 63

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTE---KSALDFL 120
           +    V  G ++ +G  L+  +  +  + +   + + ++L   +  I+ E   K  + F 
Sbjct: 64  VSNIDVHEGDEVQKGQTLIQLDVNQLKERLGEAESNYQHLLAQKARIEAELHDKKHIQFP 123

Query: 121 NNKYDVLEKA----FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           N+  + ++KA    F++R   L + L            Y I  +  ++K         Y 
Sbjct: 124 NDISEDIKKAESTIFQNRRTNLKNRLDD--------LKYQIKELKEAIKS--------YQ 167

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ---NDLNQQERIVYKSTLELREN 233
             L+ + K      LL S++++L   +NLF++  V +    DL ++   V      L+  
Sbjct: 168 TSLEYKQK------LLDSYKQELQKWQNLFKEGLVDELKIYDLKRKIDQVQDDIETLQSQ 221

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           I ++K     I EL ++  L  + Y KE+   L++++   A   SK+ I +   E+ +I 
Sbjct: 222 IKQKKAT---IEELQNKMKLIVSEYKKELLDTLKKDEMQLASLKSKIAIYKDEIEKSSIK 278

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +V  Q  SS      ++P++ +VP ++   I AK++P  I  V  G  A + F 
Sbjct: 279 APDRGVVVDMQVHSSGEVILPNRPILYVVPKNEKLIIEAKISPMDIDKVHVGQKAEIHFA 338

Query: 354 HYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNG 408
            Y D   K    K I    D I   +D  +Q   YY+ +++IT     A  +N  ++  G
Sbjct: 339 SYVDPSAKPVYGKVIYVSADVIKDPKDPRIQ---YYKALIEITPDGMRAIKENGFKVMPG 395

Query: 409 FPAEVLFTAKNTTLAQEIIHPI 430
            P  V   A   +    ++ P+
Sbjct: 396 MPVTVFIKAGQRSFISYLLMPL 417


>gi|87198270|ref|YP_495527.1| Type I secretion membrane fusion protein, HlyD [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87133951|gb|ABD24693.1| Type I secretion membrane fusion protein, HlyD [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 446

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 99/457 (21%), Positives = 194/457 (42%), Gaps = 62/457 (13%)

Query: 12  NHPASLKRMTLLSIIGIIG-----LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + PA      L  +  I+G     L   ++++PI  +V  +G++  +  V  I  P  G+
Sbjct: 19  DAPAPESATNLRRLAAIVGGLFVVLFAMALVVPIGGAVIGNGQVGVQSRVKRIAHPTGGV 78

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNK 123
           I +  V NG  + QG  L+  +D  T        ++++ L   R  ++ E+  L  +   
Sbjct: 79  IAEIAVTNGEHVKQGQLLMRLDDRVTGADATYSSLTVEQLLAQRARLEAERLGLGSVTFP 138

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LE 182
            ++L     S  + + D   + H             ++R   ++  ++R+    R++  +
Sbjct: 139 PELLNAGTPSAAKAMAD---EAH-------------LFRMRSVETAQVRAQLGARVNQYQ 182

Query: 183 NKSSLLRALLSSHQKDLTMM-------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
            +   + A ++S +K  T++       K+L++K  V+ N LNQ ER    S ++L  ++ 
Sbjct: 183 QEIRGIEAQIASLRKQRTLIEPERQSVKDLWDKQLVTINRLNQLER----SAVDLDGSVG 238

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD-EMSKL-TILEKTR------ 287
                +        EA        +E S  + Q +R  A  E++++ T L + R      
Sbjct: 239 ALNAQIAQARARITEA--------QEQSIQVSQQRRVDAGVELAQVNTALNQQRLRSVAA 290

Query: 288 ----EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               ++  I +P +GT+      +  +  + ++P+M+IVP   +  + A + P  I  V 
Sbjct: 291 NDQQDRSEIRAPYSGTVEKIAFAAIGDVVRPAEPIMEIVPDRDVMVVEAAIGPADIDQVA 350

Query: 344 KGYTATVRFPHY--ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           KG  A VRF  +  A   E   K +    D    + +N      +Y V + +   A +  
Sbjct: 351 KGQVARVRFSAFNRAATPEIAGKVLYVATD----RTENPESRASFYMVRIAVDQAAIARE 406

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            ++LR+G PAEV     + +L      P+ D + + F
Sbjct: 407 KLDLRSGMPAEVYIETGSRSLLSYFTKPLRDQFSRAF 443


>gi|300113968|ref|YP_003760543.1| HlyD family type I secretion membrane fusion protein [Nitrosococcus
           watsonii C-113]
 gi|299539905|gb|ADJ28222.1| type I secretion membrane fusion protein, HlyD family
           [Nitrosococcus watsonii C-113]
          Length = 455

 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/390 (22%), Positives = 170/390 (43%), Gaps = 47/390 (12%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-----SIKNLRCHIDTEKS-AL 117
            GI+++  V++G Q+  G  LL  +       + + ++      +  +R   +   + ++
Sbjct: 83  GGIVEEIWVQDGDQVEAGNTLLVLDKTRVLSQLQIARMQYLTSGVARVRLLAEQRGARSI 142

Query: 118 DF----LNNKYD------VLEKA-FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +F     N+++        ++KA F++R E L + L  +    S+            +K 
Sbjct: 143 EFSEALRNSRFPRVKEVLAVQKALFQARREALAETLHGFDEQISQ------------MKE 190

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           ++  ++S+          S  + A L    KDL   + LF++  VS   L + ER +   
Sbjct: 191 QIDGLQSMI-------KVSQSMAASLRVEAKDL---RRLFKEGFVSNQRLRELERKILGI 240

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             E+ +   E   +   I+E   +  LE   + KE+   L Q Q + AD   ++T LE+ 
Sbjct: 241 QGEIAQYRSEIVRLQSRISENQTQKRLEQQEFQKEVGEQLRQAQASIADAEERMTALEEQ 300

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            ++ TI +P+ GT+V     +     +  +P++ IVP      + A++  + I ++  G 
Sbjct: 301 IKRTTITAPVTGTVVGMAVHTLGAVIRPGEPVLSIVPSGGDFVVEARIPDRDIDNIYTGQ 360

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ--DNNLQTQEYYEVILKITDLAFS--DNN 402
            A +RF  +     ++   +IE     IS    ++ +  + YY+  +K+T       + N
Sbjct: 361 YAEIRFSAF----NQRLTDVIEGKVVHISADAFEDEITGERYYKARIKVTATGEKNMNRN 416

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           I+L  G PAEV+      T A  +  PI D
Sbjct: 417 IQLLAGMPAEVMIRTGERTFASYVAKPIAD 446


>gi|326388175|ref|ZP_08209778.1| Type I secretion membrane fusion protein, HlyD [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207341|gb|EGD58155.1| Type I secretion membrane fusion protein, HlyD [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 449

 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 99/435 (22%), Positives = 179/435 (41%), Gaps = 61/435 (14%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           L   +I +PI  +V   G++  E  V  I  P  G+IK+  V NG  + +G  LL F+D 
Sbjct: 46  LFVLAIAVPIGGAVIGGGQVSVETRVKRIAHPTGGVIKQILVTNGQHVTEGQLLLRFDDR 105

Query: 91  ETTDLIDLKKVSIKNL---RCHIDTEK---SALDF----LNNKYDVLEKAFES------- 133
            T        ++++ L   +  ++ E+   S +DF             KA E        
Sbjct: 106 VTGADERFSSLTVEQLLAQKARLEAERLGQSRIDFPTELTGANTPTARKAMEDEQHLFTM 165

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R+ +  D   +  +  ++ +N  I    R L+ ++  +R                R L+ 
Sbjct: 166 RQTEEADMKSQMSARVAQ-YNEEI----RGLEAQIAALRQ--------------QRKLIE 206

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVY---KSTLELRENIHEQKNMLRHIN----E 246
             ++     + L++K  V+ + LNQ ER       S   L+  I + +  +        +
Sbjct: 207 PERQS---ARELWDKQLVTISRLNQLERTAVDMDGSLGSLQAQIAQARAKITEAQAQSIQ 263

Query: 247 LYDEANLEFANYLKEISRDLEQNQ-RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           L     +E  N L +I+  L Q Q R+ +   S++        +  + +P +GTI     
Sbjct: 264 LTQTRRVEAGNDLNQINSTLNQQQLRSVSATDSQV--------RSDVRAPYSGTIEKIAF 315

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY--ADIREKKF 363
            +  +  + ++P+M+IVP      + A ++P  I  V KG    +RF  +  A   E   
Sbjct: 316 VAIGDVVRPAEPIMEIVPDRDTMVVEAMISPTDIDQVAKGQVTRIRFSSFNRAATPEIPG 375

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           K I    D    + +N    Q YY V ++I        +++LR+G PAEV     + +L 
Sbjct: 376 KVIYVATD----RTENPESKQAYYTVRVEIDQAMLRREHLDLRSGMPAEVYIETGSRSLM 431

Query: 424 QEIIHPITDNWPKIF 438
             +  P+ D + + F
Sbjct: 432 SYLTKPLRDQFVRAF 446


>gi|104783706|ref|YP_610204.1| heme acquisition transporter, membrane fusion protein HasE
           [Pseudomonas entomophila L48]
 gi|95112693|emb|CAK17421.1| heme acquisition transporter, membrane fusion protein HasE
           [Pseudomonas entomophila L48]
          Length = 446

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 88/430 (20%), Positives = 178/430 (41%), Gaps = 29/430 (6%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           PA   R   L ++G+ G + W  L P++  V  SG ++   +   ++ P  G+I++  V 
Sbjct: 26  PARAGRW--LVLVGLGGFLLWGALAPLDKGVPVSGNVVVAGSRQAVQHPTGGVIEQLLVR 83

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +G Q+L G  LL  +  +         V   N R      ++ L    +   V+E     
Sbjct: 84  DGDQVLTGQVLLRLDATQAQAQQGSLHVQYVNARAG----EARLLAERDGSAVIEFPTAL 139

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRALL 192
           RE+    ++        ++F     S  ++L+ +L  +  SI   +  L+     L+  L
Sbjct: 140 REQAATPWVAAALEAQRQLFG----SRRQALETELAGLGESIAGAQASLQG----LQGTL 191

Query: 193 SSHQ-------KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +S Q       + L  ++ L     + +N L   ER++ +    + E++       R + 
Sbjct: 192 ASKQAQRDALDEQLKGLRELASDGYIPRNRLLDSERLLAQVNGSIAEDLGAIGRTQRQVQ 251

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           EL   A      +  ++ + L + Q +  D  ++L   E       + +P +GT+V    
Sbjct: 252 ELKLRAVQRRQEFQNDVRQQLSERQASAEDLGNRLRGAEFELAHTQVRAPASGTVVGLSV 311

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           F++     + QPLM+IVP +    + A+ + + +  +K G    + F  +      +   
Sbjct: 312 FTNGGVIARGQPLMEIVPANAPLLVDARASVELVDRLKPGLPVELLFVAFNQSTTPRVAG 371

Query: 366 IIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
            +  +  D ++   D+  Q Q YY+V +K+++        +++R G P E        +L
Sbjct: 372 EVTLVSADRLL---DDKTQ-QPYYQVRIKVSEEGLRQLAGLDIRPGMPVEAFVRTGERSL 427

Query: 423 AQEIIHPITD 432
              +  P+ D
Sbjct: 428 LNYLFKPLAD 437


>gi|330445560|ref|ZP_08309212.1| type I secretion membrane fusion, HlyD family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328489751|dbj|GAA03709.1| type I secretion membrane fusion, HlyD family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 439

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 194/450 (43%), Gaps = 60/450 (13%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  W N K  H    +++  L  + +I +ITW+    +E  V   G+++    + +I+S 
Sbjct: 4   NLKWANQK--HAYRSRKIVWLCSLLVIAIITWAAYSKLEEVVVGDGKVVPTQAIQKIQSL 61

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GII++  V  G Q+ QG  LL  +D              + L+  I   K+ L+ +  
Sbjct: 62  EGGIIEQVLVSPGEQVKQGQTLLILDDTRFRTAFQESDEHFRTLQAQIKRLKAELETV-- 119

Query: 123 KYDVLEKAFESR---EEQLLDF--LGKYHSTCSKV-FNYGISSVYRSL-KMKLTRMRSIY 175
           K +  EK ++ +     Q LDF  L K     +K  +N  IS +   L + +LT  +   
Sbjct: 120 KVNTREKDWKKQITISHQALDFDDLSKRAQINAKANYNERISQIESQLEEAQLTIEQQTE 179

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER-------------- 221
             R D ++ ++ L + L    K+  M++   ++ AV++ +L Q  R              
Sbjct: 180 ALR-DAKSNTATLNSSLRLVNKEARMLEGAVKRGAVAEVELIQTRRDQVKIRGEIASSKV 238

Query: 222 IVYKSTLELRENIHEQKNML----RHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
              K++  LRE I  ++N+       +    +EA  +FA         LE +Q   AD++
Sbjct: 239 AQQKASAALREAIVMRRNLALEFRTSVQAQLNEATNQFAQ--------LEDSQEGLADQL 290

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
            +            I +P+ GTI      S     +  +P+M++VP+     + A+++P+
Sbjct: 291 KR----------TEITAPMDGTIKDILVRSLGGVVKPGEPIMELVPNDSKLIVEARISPQ 340

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE---YYEVILKIT 394
            I  V KG  AT++F  Y  +     K  +  +        + LQT++   YY   +++ 
Sbjct: 341 DIAFVSKGLEATIKFTAYDFVVYGGRKGTVTYVSA------DALQTEDGTAYYRAHIQLH 394

Query: 395 DLAFSDNNIELRNGFPAEV-LFTAKNTTLA 423
           D    D  +++  G  A V + T + T L+
Sbjct: 395 D--DPDTRLQVIPGMQAMVDILTGEKTVLS 422


>gi|190890292|ref|YP_001976834.1| protein secretion protein, HlyD family [Rhizobium etli CIAT 652]
 gi|190695571|gb|ACE89656.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CIAT 652]
          Length = 481

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 95/443 (21%), Positives = 190/443 (42%), Gaps = 56/443 (12%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL ++ I+GL  WS+L P++ +  ++G I  E +   I+    GI+++  V+NG  ++ G
Sbjct: 66  LLILVFIVGLGIWSVLAPLKSAAVATGVIEPESSRKTIQHLEGGIVRRILVKNGDAVISG 125

Query: 82  TPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             ++  +D ++    D I  +    +  R  +  E++  D +    D L  A +      
Sbjct: 126 QIVIELDDTKSRSERDSILGQLWDAEGNRARLLAEQAGADQVTYPED-LRAAMD------ 178

Query: 139 LDFLGKYHSTCS------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL--RA 190
                +Y S  +      K+F      +   +++   R+  +    + L  + + L  RA
Sbjct: 179 -----RYPSASAILTGQQKIFEARRQVMQAEIRITNERIAQVRQEIVGLGAQKTALADRA 233

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV----YKSTLELRENIHEQKNMLRHINE 246
            +SS + D        +  A+S   L ++ R++     K+ L+      +Q  +   I+ 
Sbjct: 234 AISSQELD--------QVTALSAKGLERKNRLLNLQREKADLD-----GQQGEVAAQISR 280

Query: 247 LY--------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            Y        D A LE ++ L EI++ +   +        +L  ++    +  I +P  G
Sbjct: 281 AYQVISGAQADLAKLE-SDRLSEIAQGMRDTEGRIMQLRERLRAIDDQLSRTDIRAPEDG 339

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           TI+  +  +S       +PL+ ++P S    +   V P+ I  V+ G  A V    Y   
Sbjct: 340 TIMNLRVHTSGGVIGAGEPLVDLLPRSDRLIVSVHVRPEDINLVRAGLEAQVHLLPYNQR 399

Query: 359 REKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLF 415
           R    K  +E +  D +I  Q      Q Y+   +++TD   +  +++EL  G PA+ L 
Sbjct: 400 RVPLLKGRVEYVSADRLIDTQTG----QPYFAATIRVTDERLAKMSDVELVAGMPAQTLI 455

Query: 416 TAKNTTLAQEIIHPITDNWPKIF 438
               +++A   + P+ D++ + F
Sbjct: 456 ETGESSVAFYAVRPLLDSFNRAF 478


>gi|327191612|gb|EGE58624.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CNPAF512]
          Length = 481

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 98/436 (22%), Positives = 187/436 (42%), Gaps = 42/436 (9%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL ++ I+GL  WS+L P++ +  +SG I  E +   I+    GI+++  V+NG  ++ G
Sbjct: 66  LLMLVFIVGLGIWSVLAPLKSAAVASGVIEPESSRKTIQHLEGGIVRRILVKNGDAVISG 125

Query: 82  TPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             ++  +D ++    D I  +    +  R  +  E++  D +    D L  A +      
Sbjct: 126 QIVIELDDTKSRSERDSILGQLWDAEGNRARLLAEQAGADQVTYPED-LRAAMDRYPAAS 184

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL--RALLSSHQ 196
               G+      K+F      +   +++   R+  +    + L  + + L  RA +SS +
Sbjct: 185 AILTGQ-----QKIFEARRQVMQAEIQITNERIAQVRQEIVGLGAQKTALADRAAISSQE 239

Query: 197 KDLTM---MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY----- 248
            D  +    K L  KN +    LN Q     K+ L+      +Q  +   I+  Y     
Sbjct: 240 LDQVIALSAKGLERKNRL----LNLQRE---KADLD-----GQQGEVAAQISRAYQVISG 287

Query: 249 ---DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              D A LE ++ L EI++ +   +        +L  ++    +  I +P  GTI+  + 
Sbjct: 288 AQADLAKLE-SDRLSEIAQGMRDTEGRIMQLRERLRAIDDQLSRTDIRAPEDGTIMNLRV 346

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +S       +PL+ ++P S    +   V P+ I  V+ G  A V    Y   R    K 
Sbjct: 347 HTSGGVIGAGEPLVDLLPRSDRLIVSVHVRPEDINLVRAGLEAQVHLLPYNQRRVPLLKG 406

Query: 366 IIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
            +E +  D +I  Q      Q Y+   +++TD   +  +++EL  G PA+ L     +++
Sbjct: 407 RVEYVSADRLIDTQTG----QSYFAATIRVTDERLAKMSDVELVAGMPAQTLIETGESSV 462

Query: 423 AQEIIHPITDNWPKIF 438
           A   + P+ D++ + F
Sbjct: 463 AFYAVRPLFDSFNRAF 478


>gi|152991936|ref|YP_001357657.1| type I secretion membrane fusion protein [Sulfurovum sp. NBC37-1]
 gi|151423797|dbj|BAF71300.1| type I secretion membrane fusion protein [Sulfurovum sp. NBC37-1]
          Length = 446

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 198/466 (42%), Gaps = 64/466 (13%)

Query: 2   HHFMWKNLKRNHPASLKR--MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEI 59
           HH +   L++ H ++ K   +T+L I G+ G+  WS+   I  +++++G+++ +     I
Sbjct: 13  HHEL---LEKTHRSARKAGIITILLIFGLFGI--WSVFADIATTITANGKVITDTYNKII 67

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR------CHIDTE 113
             P  GI+KK  V  G  + +G  LL   +I++TD +     +I          C +  E
Sbjct: 68  THPKGGIVKKIFVHEGDVVKKGDKLL---EIDSTDYLSKLDAAISQYDAALFTICRLKAE 124

Query: 114 KSALDFLNNKYDVLEKAF---ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            S L  LN   D LEK     E  +E   D +  +HS               SLK K+T 
Sbjct: 125 ASFLKELN--CDALEKKLLNPEEYQELKSDAISLFHSEM------------ESLKSKITL 170

Query: 171 MRSIYLNRLDLENKSSLL------RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           ++S   N++  E    L       + LLSS++ +L   K L ++NAV +    + ER + 
Sbjct: 171 LKS--KNKILTEQNVGLKKHIESNKKLLSSYELELKKWKKLLKQNAVDEQKSIETERKIE 228

Query: 225 K-----STLE--LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           +      +LE  +RENI    ++  +  ++  E N    N L  + +   +N+ T    M
Sbjct: 229 QIHQQIESLESTIRENI---ASIDANKKQMDLEKNTFKNNALSNLGKLKLENKLTKTQIM 285

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           S     E   +   I SP  G +   +  +S       +P+M IVP  +   I A V P 
Sbjct: 286 S----YENGIDNSIIKSPGEGRVTDMKIHASGEVVAPQKPIMSIVPLKQKLKIEAFVLPT 341

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKIT- 394
            I+ +  G    + FP + D         I  I  D I+ +       + +Y +++K T 
Sbjct: 342 DIEKIHVGQQTEISFPSFVDPSAIPIAGKISYISADSIVPEG----MKEPFYRILVKFTP 397

Query: 395 --DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             + A   NN  +  G P  V       TL + I+ P+      IF
Sbjct: 398 EGEKAIKKNNFLILPGMPTAVFVKTGKMTLLEYIMQPLIQLSKGIF 443


>gi|77165292|ref|YP_343817.1| Type I secretion membrane fusion protein, HlyD [Nitrosococcus
           oceani ATCC 19707]
 gi|254433587|ref|ZP_05047095.1| type I secretion membrane fusion protein, HlyD family
           [Nitrosococcus oceani AFC27]
 gi|76883606|gb|ABA58287.1| Type I secretion membrane fusion protein, HlyD [Nitrosococcus
           oceani ATCC 19707]
 gi|207089920|gb|EDZ67191.1| type I secretion membrane fusion protein, HlyD family
           [Nitrosococcus oceani AFC27]
          Length = 455

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 11/252 (4%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           S  L A L    KDL   ++LF++  VS   L + ER + +   E+ +   E   +   I
Sbjct: 202 SQSLAASLRVEAKDL---RHLFKEGFVSNQRLRELERKILQIQGEVAQYHSEILRLRSKI 258

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E   +  L+   + KE+   L Q Q   A+   +++ L K  ++ TI +P+ GT+V   
Sbjct: 259 SENQTQKRLKQQEFQKEVGEQLRQAQANIAEAEERMSALNKQVKRTTITAPVTGTVVGMT 318

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +         P+M IVP      + A++  + I ++  G  A +RF  +     ++  
Sbjct: 319 VHTLGAVIHAGDPIMFIVPSGSGFVVEARIPDRDIDNIYAGQYAEIRFSAF----NQRLT 374

Query: 365 AIIEKIDPIISQQ--DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNT 420
            +IE     IS    ++ +    YY+  +K+T     +  +NI+L  G PAEV+      
Sbjct: 375 DVIEGEVVHISADAFEDEITGGRYYKARIKVTAAGKQNMSSNIQLLAGMPAEVMIRTGER 434

Query: 421 TLAQEIIHPITD 432
           T A  +  PI D
Sbjct: 435 TFASYVAKPIAD 446


>gi|254500127|ref|ZP_05112279.1| putative auxiliary transport protein, MFP family [Labrenzia
           alexandrii DFL-11]
 gi|222441425|gb|EEE48103.1| putative auxiliary transport protein, MFP family [Labrenzia
           alexandrii DFL-11]
          Length = 434

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 196/451 (43%), Gaps = 72/451 (15%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           T+L   G++G   W+ +  ++ +V +SGE+  E N  E++    GI+KK  V  G  +  
Sbjct: 23  TILLTFGVVG--AWAAIAKLDKAVIASGEVEVEANRREVQHLEGGIVKKKDVAEGQVVKA 80

Query: 81  GTPLLTFEDIETTDLIDLKKVSI---------------KNLRCHIDTEKSALDFLNNKYD 125
           G  L+   D+E     DL+ V+I               +NL  HI+ ++S L   +   +
Sbjct: 81  GDVLIELRDVEAR--ADLQVVTIRLRIGEAVEARLRAERNLEDHIEFKESLL--ADKTPE 136

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY-------LNR 178
           V++   +  ++++ D       +   +    +  + R  K+ L   +  Y       L R
Sbjct: 137 VVDAVAD--QQRIFDDRTSILKSQQDILTNRVDQLKRE-KLGLGEQKEAYEARAKVLLGR 193

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIH 235
           LD       LR  L S     ++ KNLF   A  +++  + +  V     E+    ++I 
Sbjct: 194 LD------RLREGLESG----SIQKNLF---ATYEDEYIEVKAFVASMDTEIAKVEKSIG 240

Query: 236 EQK-NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           E +  ML+   E  + A+ E+     +I ++L +  +   D      +L++T+    I +
Sbjct: 241 ETEFQMLQTRQEFRERASTEYKEIYGQI-QELREQSKVAQD------VLDRTK----IRA 289

Query: 295 PIAGTIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           PI G     Q+   + +  Q+ Q L++IVP +    I A+V P  I  V +G TA V+F 
Sbjct: 290 PIDGV---AQNIKLNGFVIQRGQTLLEIVPDTDEMIINARVQPLDIDSVSEGLTAEVKFT 346

Query: 354 HYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            +      +   IIE     +S+     ++  QT  Y   +    D+   D    L  G 
Sbjct: 347 SFP----SRLMPIIEGEVLTVSRGTITPEDTRQTPYYLARVQVSKDVLPEDVRGRLSAGM 402

Query: 410 PAEVLFTAKNTTLAQEIIHPITDN-WPKIFE 439
           PA+VL T+   T+   +I PITD  W  + E
Sbjct: 403 PADVLITSGERTVVDYMISPITDAIWKSLRE 433


>gi|262273892|ref|ZP_06051705.1| membrane-fusion protein [Grimontia hollisae CIP 101886]
 gi|262222307|gb|EEY73619.1| membrane-fusion protein [Grimontia hollisae CIP 101886]
          Length = 430

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 102/447 (22%), Positives = 194/447 (43%), Gaps = 41/447 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLI-----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N   +++R+ ++   G I L       WS+  P+E +  + G +  +     ++    GI
Sbjct: 2   NEIPAIRRLVIIGF-GAIALFLGTFGVWSVFSPLEGASIAPGVVTVDSQRKTVQHLEGGI 60

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I K  V  G  + +G PL+  +  + +    L++++ +  R  +  E   +   +NK D+
Sbjct: 61  IDKILVAEGVDVAKGDPLIYLDKTQAS--TQLEQLTTRQ-RNALAREARLITERDNKPDI 117

Query: 127 ------LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                 L +    R E+LL    +        F+     + + L      +      RL+
Sbjct: 118 TFPDALLMEKDNPRVEELLVNQQRIFEARRDFFDSQTEIIDKQLAQNTAELDG-QKKRLE 176

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHE- 236
           +E +       LS   +++   + L EK  VS+     L ++E  +  +  +L+ N    
Sbjct: 177 IEKRR------LSIIGEEIAGNRQLAEKGYVSKTQVLRLEREEAQILSTISQLQSNASRL 230

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL-TILEKTREQKTILSP 295
           Q+N+  ++ +L  E  LE    + E  R+  Q +    D+++    IL++T    TI +P
Sbjct: 231 QQNVAENLAQLK-EQELERVREIVEGLRESRQERYELDDQIAAAKDILDRT----TIKAP 285

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           ++GT++  Q FS        QPL+ IVP  +   I AKV P  I  V+ G  A +R    
Sbjct: 286 LSGTVLNLQVFSEEGVITPGQPLLDIVPSDESLVIEAKVDPSDIDQVRAGMKAQIRLTAL 345

Query: 356 A--DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPA 411
           +   +R  + + +    D ++ +Q        YY   +K+ D   +D    IEL  G  A
Sbjct: 346 SMRSVRPLEGELMTVSADRLVDEQSG----LAYYLARVKLID-NINDILGGIELYPGMQA 400

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIF 438
           EV+   +  T  + ++ P+T++  + F
Sbjct: 401 EVMLLTEPRTPIEYLLKPLTESLNRAF 427


>gi|3493598|gb|AAC33451.1| ZapC [Proteus mirabilis]
          Length = 441

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 186/430 (43%), Gaps = 49/430 (11%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           ++G+   I W+   P++  V + G ++   N   ++S   GII    V+NG  +  G  L
Sbjct: 30  LLGLAIFIFWAAFAPLDKGVPAIGNVVISGNKKSVQSSVEGIITHIFVKNGDPVSAGQTL 89

Query: 85  LTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAF---ESREE 136
           +    I++  L+        NL     R + +  +     LNN     EK +   E+RE+
Sbjct: 90  IQLSPIQSQALVKSLSEQYDNLLITQQRLYAELNQQTSFKLNNN----EKYYSSTENREK 145

Query: 137 QLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNR----LDLENKSSLLRA 190
            LL      +   +++ +   G  +V   +  +LT ++    N+     +L+N+ + L+ 
Sbjct: 146 LLLQQNRLLNEKSAELISEINGYKAVIDGITSRLTHLKRSIQNKKSQISNLQNQLNDLQI 205

Query: 191 LLS----SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           L +       +   M++ L E N    N LN  E     S LE ++  +EQ+ + R+   
Sbjct: 206 LANEGYIPRHRYQEMIRELAENN----NQLN--ETFGQISALEKQKLEYEQRILQRN--- 256

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVYNQS 305
                    ANY +    +L + Q   + E  K  I+EK +  K  I++PI+GT++    
Sbjct: 257 ---------ANYYQLARTELNKIQLQIS-ETEKQLIIEKDKLAKMAIIAPISGTVMDLSV 306

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           F+   + +  Q LM IVP      I A++ P  I  V  G    + F  +      K   
Sbjct: 307 FTQGGFVKTGQTLMDIVPEDHQLVIEARLAPHLIDKVTPGLPVDLIFTAFNQNTTPKIPG 366

Query: 366 IIEKI--DPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNTTL 422
            +  I  D +I ++     T+ YY+V++ I D    +DN  +L+ G P +V     + +L
Sbjct: 367 EVTIISADRLIDERT----TEPYYQVLINIKDYTLLADNKNKLKAGMPVDVFIKTGDRSL 422

Query: 423 AQEIIHPITD 432
              +  P+ D
Sbjct: 423 LNYLFKPVLD 432


>gi|71066153|ref|YP_264880.1| hlyD family secretion protein [Psychrobacter arcticus 273-4]
 gi|71039138|gb|AAZ19446.1| hlyD family secretion protein [Psychrobacter arcticus 273-4]
          Length = 389

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 99/411 (24%), Positives = 168/411 (40%), Gaps = 55/411 (13%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           + +IGI+ L+ W+    I+    +   ++      EI++P  G++ +  V  G ++  G 
Sbjct: 22  IGLIGIVVLLVWASFAKIDQVTRAKATVIASARTQEIQAPEGGVLTELAVTEGQEVKAGQ 81

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L+  E+       +  K ++ N   +    K+ L  LN   ++ EK         L F 
Sbjct: 82  LLVVLEE-------ERAKAALDNSASNTAALKAKLARLNA--EIFEKP--------LVF- 123

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                    V NY     Y   +  L   R     R  +  + S L  +L   +K+L+M 
Sbjct: 124 ------TKDVKNY---PEYVQNQTALYNRR-----RQAINEEVSSLEVMLVLAEKELSMN 169

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + L E   VSQ D+ +  R V         +I  Q N  R  N+ ++EA  E     +E+
Sbjct: 170 EPLLEYGDVSQADVIKLHRQV--------ADIEAQINNKR--NKYFEEAQAEMTKAQEEL 219

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
             +LEQ      D +  L       E+K ++SP  G I      +     +  + +++I+
Sbjct: 220 DTELEQ----LRDRVHVL-------EEKRLMSPTDGKIKNINVTTIGGVVKPGEVILQIL 268

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P S    I AKV+P  I +VK+G  ATV+   Y           +  I P    +     
Sbjct: 269 PTSSDLIIDAKVSPADIAYVKEGQKATVKLDAYDYSIFGAMNGTVSYISPDTLMEQTPKG 328

Query: 383 TQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            + YY V++ IT   F   +++I ++ G  A V   A   T+   +  PIT
Sbjct: 329 EEPYYRVLIIITGAEFKGREDSIVIKPGMTASVDIKAMERTVLSYLTKPIT 379


>gi|197103955|ref|YP_002129332.1| RsaA secretion system, membrane protein RsaE rsaE [Phenylobacterium
           zucineum HLK1]
 gi|196477375|gb|ACG76903.1| RsaA secretion system, membrane protein RsaE rsaE [Phenylobacterium
           zucineum HLK1]
          Length = 416

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 179/434 (41%), Gaps = 61/434 (14%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIK-SPFSGIIKKFQVENGSQILQGTPLLT 86
           +IGL  W+ + P+   +++  E+  E N   ++ S   G++K+  V  G  +    PLL 
Sbjct: 6   VIGLGAWASVTPLSTGITAPAEVRVESNRKTLRGSRQGGVVKQILVREGQHVRAQQPLLI 65

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL--EKAFESREEQLLDFLGK 144
           F D+E                      ++A+D   N+YDV+  + A  S E      L  
Sbjct: 66  FNDVEA---------------------RAAVDVFQNQYDVMLAQNARYSAEATGRSSLTF 104

Query: 145 YHSTCSKVFNYGISSVYR------SLKMKLTRMRSIYLN-RLD-LENKSSLLRALLSS-- 194
                S+  +  ++++ R      + +++L + +S  L  R++ LE +   L+A ++S  
Sbjct: 105 PAELTSRAADPRVATLIRDQEFLFATRLQLFQSQSAVLGQRIEQLETQIQGLQAQVASID 164

Query: 195 -----HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                 +++L+  + L EK    +  + + ER    S  EL     +    +  I +   
Sbjct: 165 EQRRLTEEELSGYRTLNEKGYAPKTLILRYER----SLAELGGRRGQLAAEIARIRQQMG 220

Query: 250 EANLEFANYLKE----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E  L+  +  +E     +  L ++Q   AD + +LT  ++      I +P+ G +     
Sbjct: 221 ETRLQLVSLREERQSQAAEGLRESQSRMADVVPRLTTAKQDLAATVIRAPVDGYVFNLTQ 280

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           F+        + LM IVP +    + A V P+ +  V  G  A VR          +F  
Sbjct: 281 FTVGGVVGSGEVLMDIVPATTPLTVSAMVRPEDVDQVHIGMDARVRLTGL----NSRFN- 335

Query: 366 IIEKIDPIISQQDNNLQTQE-----YYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAK 418
             E +D  ++    +  T E     +Y V L+I   +L+     +EL  G PA  L    
Sbjct: 336 --EDLDAKVAVISADRLTDEQKGLSFYRVDLRIDPRELSKLKKGVELTPGMPASALIVTG 393

Query: 419 NTTLAQEIIHPITD 432
             T+   +I PITD
Sbjct: 394 ERTVMGYLISPITD 407


>gi|241203029|ref|YP_002974125.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240856919|gb|ACS54586.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 481

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 93/443 (20%), Positives = 188/443 (42%), Gaps = 56/443 (12%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL ++ I+GL  WS+L P++ +  +SG +  E +   I+    GI+++  V+NG  ++ G
Sbjct: 66  LLILVFIVGLGIWSVLAPLKSAAIASGVVEPESSRKTIQHLEGGIVRRILVKNGDAVMGG 125

Query: 82  TPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             ++  +D ++    D I  +    +  R  +  E++  D +    D L  A +      
Sbjct: 126 QIVIELDDTKSRSERDSIQGQLWDAEGSRARLLAEQTGGDHIAYPED-LRAAMD------ 178

Query: 139 LDFLGKYHSTCS------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL--RA 190
                KY S  +      K+F      +   +++   ++  +    + L  + + L  RA
Sbjct: 179 -----KYPSVSTILIGQQKIFEARRRVMQAEIQIANEKIAQVRQEIVGLGAQKAALADRA 233

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV----YKSTLELRENIHEQKNMLRHINE 246
            +SS + D   +        +S   L ++ R++     K+ L+      +Q  +   I+ 
Sbjct: 234 TISSQELDQVTI--------LSAKGLERRSRLLNLQREKADLD-----GQQGQVEAQISR 280

Query: 247 LY--------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            Y        D A LE ++ L E+++ +   +        +L  ++    +  I +P  G
Sbjct: 281 AYQVISGSQADLAKLE-SDRLSEVAQGMRDTESRIMQLRERLRAIDDQLSRTDIRAPEDG 339

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           TI+  +  +S       +PL+ ++P S    + A V P+ I  V  G  A V    Y   
Sbjct: 340 TIMNLRIHTSGGVIGAGEPLVDLLPRSDRLVVSAHVRPEDINLVHAGLEAQVHLLPYNQR 399

Query: 359 REKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLF 415
           R    K  +E +  D +   Q      Q Y+   +++TD   +   ++EL  G PA++L 
Sbjct: 400 RVPLLKGRVEYVSADRLTDPQSG----QPYFAATIRVTDERLAKMKDVELVAGMPAQILI 455

Query: 416 TAKNTTLAQEIIHPITDNWPKIF 438
               +++A   + P+ D++ + F
Sbjct: 456 ETGKSSVALYAVRPLLDSFNRAF 478


>gi|146340900|ref|YP_001205948.1| HlyD family secretion protein [Bradyrhizobium sp. ORS278]
 gi|146193706|emb|CAL77723.1| putative secretion protein (HlyD family); putative toxin/protease
           secretion system [Bradyrhizobium sp. ORS278]
          Length = 644

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 88/424 (20%), Positives = 175/424 (41%), Gaps = 43/424 (10%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W  L+P+  +V   G ++ + NV  I+ P  GII + +V+NG ++  G  L+  +  ++ 
Sbjct: 243 WLTLVPLAGAVVVPGNLVVQSNVKAIQHPTGGIIAEIKVDNGKRVAAGDLLVRLDATQS- 301

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLDFLGKYHSTCSKV 152
                 +  ++++   ++ +++ +  L+ + D LE+  + +      D         S+ 
Sbjct: 302 ------QAQLQSITKQLNEQRAKIARLSAERDGLEQPEYPATLTSHTDDPNIRAVIASEN 355

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-------NL 205
             +   +V R  + +L + R + LN     N+ S + A L S  K + ++K       +L
Sbjct: 356 ALFKARAVTRKSQKELLQGRIVQLN-----NEISGMEAQLDSKTKQIDLIKGELAGVQDL 410

Query: 206 FEKNAVSQNDLNQQERIVYK----------STLELRENIHEQKNMLRHINELYDEANLEF 255
           ++K  V    L   +R   +          S  E R  I E +     I++         
Sbjct: 411 YDKRLVPLTRLTTLQREAARIDGERGQLVSSVAETRSKISEAELQTVKIDQ--------- 461

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            ++  E+ +DL ++Q    D + K        ++  + +P +GTI      +     +  
Sbjct: 462 -DFRSEVVKDLSESQAKEGDLVEKGVAARDQLDRIEMRAPNSGTIHQLAVHTIGGVIKPG 520

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + +M++VP S    +   V PK I HV  G  A V F  +      K    +  + P I+
Sbjct: 521 ETIMELVPDSDELQVEGHVQPKDIDHVHTGQDAMVHFNAFNSHTTPKLSGQVSFVSPDIT 580

Query: 376 QQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
                  T  +Y V + + D       ++ L+ G  AEV     + T+   ++ P+ D W
Sbjct: 581 NDQRTGST--FYTVRITLPDEERKRLGDVNLKPGMQAEVYVQTGSRTMLSYLMKPVLDQW 638

Query: 435 PKIF 438
            + F
Sbjct: 639 RRAF 642


>gi|238791581|ref|ZP_04635219.1| protease secretion protein prtE [Yersinia intermedia ATCC 29909]
 gi|238729197|gb|EEQ20713.1| protease secretion protein prtE [Yersinia intermedia ATCC 29909]
          Length = 443

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 88/438 (20%), Positives = 180/438 (41%), Gaps = 61/438 (13%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L + G  G I W++L P++  V  +G ++   N   I+ P  GI+    V +G +++ G 
Sbjct: 30  LVLAGFGGFILWALLAPLDKGVPITGTVVVSGNRKAIQHPEGGIVDHIMVHDGDRVVAGE 89

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            LLT   +                       +S  D L ++Y  L  A E+R       L
Sbjct: 90  VLLTLNAVRA---------------------RSVSDGLTSQYYQL-LANEAR------LL 121

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKL----------TRMRSIYLNRLDLENKSSLLRALL 192
            +       V    +  V R   M            +R +++ L    L    + L+A +
Sbjct: 122 AEQKGDKQLVETPRLQQVKRQTGMDEMLALQQLLLDSRQQALQLESDGLRANIAGLQAAM 181

Query: 193 SSHQK--------------DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            + ++               L  +K+L ++N V +N + + +++  +   E+ + + E K
Sbjct: 182 GAQKQVLGSKNSQKQALSQQLDGLKSLADENYVPRNKMLESKQLYAQLNGEIAQIVGEIK 241

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            + R I E      L    Y KE++  + + Q T  +  S+L           + SP+AG
Sbjct: 242 RVEREIQEQNFRIQLRQQEYRKEVNTQMAEVQSTITEVFSQLEKANFDLANIQMRSPVAG 301

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T+V  + F+        Q LM+I+P  +  ++ A+V  + +  +  G    ++F  +   
Sbjct: 302 TVVEMKVFTEGGVIAAGQSLMEILPDDQPLFVDARVPVEMVDKIHSGLAVELQFTAFNQS 361

Query: 359 REKKFKAIIEKI--DPIISQQDNNLQTQE-YYEVILKITDLAFSD-NNIELRNGFPAEVL 414
              K +  ++ +  D I+ +     +TQE YY + +++++ A    +++E++ G P +  
Sbjct: 362 TTPKVEGTVKLLSADRILDE-----RTQEPYYSLRVEVSEAARQKLDHLEIKPGMPVQGF 416

Query: 415 FTAKNTTLAQEIIHPITD 432
                 ++   +  P+ D
Sbjct: 417 VRTGERSMINYLFKPLMD 434


>gi|209547855|ref|YP_002279772.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533611|gb|ACI53546.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 480

 Score = 76.6 bits (187), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 95/450 (21%), Positives = 179/450 (39%), Gaps = 70/450 (15%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL ++ ++GL  WS L P+  +  +SG I  E +   I+    GI+++  V NG  ++ G
Sbjct: 65  LLILVFVVGLGIWSALAPLHSAAVASGVIEPETSRKTIQHLEGGIVRRILVRNGDTVMAG 124

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             ++  +D ++                     +S  D +  +   L  A  SR   L + 
Sbjct: 125 QIVIELDDTKS---------------------RSERDSIQGQ---LWDAEGSRARLLAEQ 160

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            G  H          +   Y S+   LT  + I+      E +  +++A +    + +  
Sbjct: 161 TGGDHVAYPDDLRAAMDK-YPSVSAILTGQQKIF------EARRRVMQAEIQIGNEKIAQ 213

Query: 202 MKN-----------LFEKNAVSQNDLNQQERIVYKSTLELRENI-----------HEQKN 239
           ++            L ++ A+SQ +L +Q  I+    LE R  +            +Q  
Sbjct: 214 VRQEIVGLGAQKAALADRAAISQEEL-EQVTILTAKGLERRSRLLNLEREKADLDGQQGQ 272

Query: 240 MLRHINELY--------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +   I   Y        D A LE ++ L E+++ +   +        +L  ++    +  
Sbjct: 273 VGAQIARAYQVISESQVDLAKLE-SDRLSEVAQGMRDTESRIMQLRERLRAIDDQLSRTD 331

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P  GTI+  +  +S       +PL+ ++P S    + A V P+ I  V  G  A V 
Sbjct: 332 IRAPEDGTIMNLRIHTSGGVIGAGEPLVDLLPRSDRLIVSAHVRPEDINLVHAGLEAQVH 391

Query: 352 FPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNG 408
              Y   R    K  +E +  D +   Q      Q YY   +++TD   +   ++EL  G
Sbjct: 392 LLPYNQRRVPLLKGRVEYVSADRLTDTQSG----QPYYAATIRVTDERLAKMRDVELVAG 447

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            PA+ L     +++A   + P+ D++ + F
Sbjct: 448 MPAQTLIETGKSSVALYAVRPLLDSFNRAF 477


>gi|148556907|ref|YP_001264489.1| HlyD family type I secretion membrane fusion protein [Sphingomonas
           wittichii RW1]
 gi|148502097|gb|ABQ70351.1| type I secretion membrane fusion protein, HlyD family [Sphingomonas
           wittichii RW1]
          Length = 471

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 95/449 (21%), Positives = 194/449 (43%), Gaps = 46/449 (10%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           + ++L+R  P     + +L+++    L+ W+ +  I  +  ++G +  E+N   +    S
Sbjct: 43  LERDLRR--PMRTGGIVVLALV--FALLVWAAVFKISGAAMATGVVKVENNSKNLSRLES 98

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT-EKSALDFLNNK 123
           G++++  V  G ++ +G  L+ F+D +    +D+ +  + +    I   +  A D     
Sbjct: 99  GVVRQIFVREGQKVAKGQLLIRFDDSQAGASVDIYQSVVDSSNAQIARFQAEAADAAAVA 158

Query: 124 Y--DVLEKAFESREEQLL---DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           Y  ++  +  + R   L+   D L +  +T  +     + S  + L+   T++  + +  
Sbjct: 159 YPSELRSRMNDPRVAALIQGQDALFQTRTTLYRSQALVLGSQAQQLE---TQINGLNIQA 215

Query: 179 LDLENKSSLLRALLS-----SHQKDLTMMKNL-FEKNAVSQNDLNQQERIVYKSTLELRE 232
             +E++S L+R  L      + Q      + L  E+NAV    +  Q+  V      +R+
Sbjct: 216 QAIEDQSKLIREELDGVRELARQGYAPNSRLLALERNAVQ---VRGQKGSVMSDVARVRQ 272

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +I +   +   I +L D    E A+ ++         Q   AD + KL   +  R+Q  +
Sbjct: 273 SIGQ---IRLQIAQLEDRHQTEVADGIRAA-------QEKLADAVPKLRASQVLRDQSEV 322

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P+AG +     F+    A   Q LM+IVP +    I A+V+P+ I  V+KG  A V  
Sbjct: 323 RAPVAGYVFNLTQFTEGGVAGAGQTLMQIVPTNTELIIAAEVSPRDISDVRKGMPARVTL 382

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YY--EVILKITDLAFSDNNIEL 405
             +          ++  +D  +S    + +  E     Y+  E+ +   +LA +  N+ L
Sbjct: 383 LGFN-------PRLVSPVDGTVSLVSADARVNEKSGTSYFLVEITVPAANLAKAGPNVHL 435

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
             G PA V       ++   ++ P TD+ 
Sbjct: 436 TPGMPASVAIVTGERSILDYLLEPFTDSM 464


>gi|227357940|ref|ZP_03842283.1| alkaline proteinase secretion protein [Proteus mirabilis ATCC
           29906]
 gi|227161849|gb|EEI46878.1| alkaline proteinase secretion protein [Proteus mirabilis ATCC
           29906]
          Length = 441

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 100/432 (23%), Positives = 177/432 (40%), Gaps = 53/432 (12%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           ++G+   I W+   P++  V + G ++   N   ++S   GII    V+NG  +  G  L
Sbjct: 30  LLGLAIFIFWAAFAPLDKGVPAIGNVVISGNKKSVQSSVEGIITHIFVKNGDPVSAGQTL 89

Query: 85  LTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESREEQ-- 137
           +    +++  L+        NL     R + +  +     LNN     EK + S E +  
Sbjct: 90  IQLSPLQSQALVKSLSEQYDNLLITQQRLYAELNQQTSFKLNNN----EKYYSSTENREK 145

Query: 138 -----LLDFLGKYHSTCSKVFNY-----GISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                      K     S++  Y     GI+S    LK  +   +S   N   L+N+ + 
Sbjct: 146 LLLQQNRLLNEKSAELISEINGYKAAIDGITSRLTHLKRSIQNKKSQISN---LQNQLND 202

Query: 188 LRALLS----SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           L+ L +       +   M++ L E N    N LN  E     S LE ++  +EQ+ + R+
Sbjct: 203 LQILANEGYIPRHRYQEMIRELAENN----NQLN--ETFGQISALEKQKLEYEQRILQRN 256

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                       ANY +    +L + Q   ++   +L I      +  I++PI+GT++  
Sbjct: 257 ------------ANYYQLARTELNKIQLQISETEKQLIIETDKLAKMAIIAPISGTVMDL 304

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             F+   + +  Q LM IVP      I A++ P  I  V  G    + F  +      K 
Sbjct: 305 SVFTQGGFVKTGQTLMDIVPEDHQLVIEARLAPHLIDKVTPGLPVDLIFSAFNQNTTPKI 364

Query: 364 KAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNT 420
              +  I  D +I ++     T+ YY+V++ I D    +DN  +L+ G P +V     + 
Sbjct: 365 PGEVTIISADRLIDERT----TEPYYQVLINIKDYTLLADNKNKLKAGMPVDVFIKTGDR 420

Query: 421 TLAQEIIHPITD 432
           +L   +  P+ D
Sbjct: 421 SLLNYLFKPVLD 432


>gi|90581645|ref|ZP_01237435.1| putative RTX transport protein [Vibrio angustum S14]
 gi|90437175|gb|EAS62376.1| putative RTX transport protein [Vibrio angustum S14]
          Length = 439

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 167/385 (43%), Gaps = 62/385 (16%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  W N K  H    +++  L  + +I +ITW+    +E  V   G+++    + +I+S 
Sbjct: 4   NLKWANQK--HAYRSRKIVWLCSLLVISIITWAAYSKLEEVVVGDGKVVPTLAIQKIQSL 61

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKS 115
             GII++  V+ G Q+ +G PL+  +D        E+ +     +  IK L+  +DT K 
Sbjct: 62  EGGIIEQVLVKAGEQVKKGQPLIILDDTRFRTAFQESDEHYRTLQAQIKRLKAELDTVK- 120

Query: 116 ALDFLNNKYDVLEKAFE-SREEQLLDFLGKYHSTCSKV-FNYGISSVYRSL-KMKLTRMR 172
               +N K    +K    S +    D L K     +K  +N  I  +   L + +LT  +
Sbjct: 121 ----VNTKEKDWKKQITISHQAIAFDDLSKRAQLNAKANYNERIGQIESQLEEAQLTIEQ 176

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER----------- 221
                R D ++ +S L + L    K+  M++   ++ AV++ +L Q  R           
Sbjct: 177 QTEALR-DAKSNTSTLYSSLRLVNKEAKMLEGAVKRGAVAEVELIQTRRDQVKLRGEIAS 235

Query: 222 ---IVYKSTLELRENIHEQKNML--------RHINELYDEANLEFANYLKEISRDLEQNQ 270
                 K++  LRE I  ++N+           +NEL +    +FA         LE +Q
Sbjct: 236 SKVAQQKASAALREAIVMRRNLALEFRTSVQAQLNELTN----QFAQ--------LEDSQ 283

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              AD++ +            I +P+ GTI      S     +  +P+M++VP+     +
Sbjct: 284 EGLADQLKR----------TEITAPMDGTIKDILVRSLGGVVKPGEPIMELVPNDSKLIV 333

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHY 355
            A+++P+ I  V+ G  AT++F  Y
Sbjct: 334 EARISPQDIAFVQTGLEATIKFTAY 358


>gi|197284185|ref|YP_002150057.1| type I secretion protein [Proteus mirabilis HI4320]
 gi|194681672|emb|CAR40750.1| type I secretion protein [Proteus mirabilis HI4320]
          Length = 441

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 98/426 (23%), Positives = 182/426 (42%), Gaps = 41/426 (9%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           ++G+   I W+   P++  V + G ++   N   ++S   GII    V+NG  +  G  L
Sbjct: 30  LLGLAIFIFWAAFAPLDKGVPAIGNVVISGNKKSVQSSVEGIITHIFVKNGDPVSAGQTL 89

Query: 85  LTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +    I++  L+        NL     R + +  +     LNN  D    + E+RE+ LL
Sbjct: 90  IQLSPIQSQALVKSLSEQYDNLLITQQRLYAELNQQTSFKLNNS-DKYYSSTENREKLLL 148

Query: 140 DFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNR----LDLENKSSLLRALLS 193
                 +   +++ +   G  +    +  +LT ++    N+     +L+N+ + L+ L +
Sbjct: 149 QQNRLLNEKSAELISEINGYKAAIDGITGRLTHLKRSIQNKKSQISNLQNQLNDLQILAN 208

Query: 194 ----SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                  +   M++ L E N    N LN  E     S LE ++  +EQ+ + R+ N  + 
Sbjct: 209 EGYIPRHRYQEMVRELAENN----NQLN--ETFGQISALEKQKLEYEQRILQRNAN-FHQ 261

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A  E    L +I   + + ++    E  KL        +  I++PI+GT++    F+  
Sbjct: 262 LARTE----LNKIQLQISETEKQLIIETDKLA-------KMAIIAPISGTVMDLSVFTQG 310

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            + +  Q LM IVP      I A++ P  I  V  G    + F  +      K    +  
Sbjct: 311 GFVKTGQTLMDIVPEDHQLVIEARLAPHLIDKVTPGLPVDLIFSAFNQNTTPKIPGEVTI 370

Query: 370 I--DPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           I  D +I ++     T+ YY+V++ I D    +DN  +L+ G P +V     + +L   +
Sbjct: 371 ISADRLIDER----TTEPYYQVLINIKDYTLLADNKNKLKAGMPVDVFIKTGDRSLLNYL 426

Query: 427 IHPITD 432
             P+ D
Sbjct: 427 FKPVLD 432


>gi|45281|emb|CAA45856.1| aprE [Pseudomonas aeruginosa PAO1]
          Length = 432

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/441 (19%), Positives = 176/441 (39%), Gaps = 31/441 (7%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M + +KR+  A  +   LL + G  G + W+   P++  V+    ++       ++ P  
Sbjct: 1   MTRTVKRDENAYARLGWLLVLFGFGGALLWAAFAPLDQGVAVPATVIISGQRKSVQHPLG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++K   V +G  +  G PL+  E  +    +D    S+ N   +    ++ L    +  
Sbjct: 61  GVVKHILVRDGQHVEAGEPLIRMEPTQARANVD----SLLNRYANARLNQARLQAEYDGR 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFN---YGISSVYRSLKMKLTRMRSIYLNRLDL 181
             LE      E+  L  LG+      ++ +     +++   +L+  +  +R+        
Sbjct: 117 RTLEMPAGLAEQAPLPTLGERLELQRQLLHSRQTALANELSALRANIEGLRAQLEGLRQT 176

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E    L + LL+S    L+  ++L E+  + +N L +QER       E+   + E     
Sbjct: 177 EGNQRLQQRLLNSQ---LSGARDLAEEGYMPRNQLLEQER----QLAEVNARLSESSGRF 229

Query: 242 RHINELYDEANLEFAN----YLKEISRDLEQ---NQRTFADEMSKLTILEKTREQKTILS 294
             I +   EA +  A     Y KE++  L +   N RT  +E+S      +  E   I +
Sbjct: 230 GQIRQSIAEAQMRIAQREEEYRKEVNGQLAETQVNARTLWEELSSARYELRHAE---IRA 286

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P++G +   + F+        + LM IVP+S    +  ++    +  +  G    + F  
Sbjct: 287 PVSGYVAGLKVFTDGGVIGPGELLMYIVPNSDSLEVEGQLAVNLVDRIHSGLPVEMLFTA 346

Query: 355 YADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPA 411
           +   +  +    +  +  D ++ +Q+     Q YY V  ++   A      +++R G   
Sbjct: 347 FNQSKTPRVTGEVTMVSADRLLDEQNK----QPYYRVRAQVDAAAMGKLKGLQIRPGMAV 402

Query: 412 EVLFTAKNTTLAQEIIHPITD 432
           +V       +L   +  P+ D
Sbjct: 403 QVFVRTGERSLLNYLFKPLFD 423


>gi|26988527|ref|NP_743952.1| HlyD family secretion protein [Pseudomonas putida KT2440]
 gi|24983296|gb|AAN67416.1|AE016369_1 HlyD family secretion protein [Pseudomonas putida KT2440]
          Length = 441

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/427 (19%), Positives = 179/427 (41%), Gaps = 32/427 (7%)

Query: 16  SLKRMTLLSII---GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
            ++R+ L  +    GI G  TW+   P+  +V  +G +  ++    ++    GI+K+   
Sbjct: 22  GIRRIGLTVVFVTFGIFG--TWAAFAPLSNAVHGTGVVTVQNYRKTVQHLEGGIVKELHA 79

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            +G  + +G PL+  ++ + +   +  +   +  +     +  E+  LD + +   ++E 
Sbjct: 80  RDGDLVKKGDPLIVLDESQLSAEYESTRNQLIVARYKEARLRAERDGLDSIPSV--IMEG 137

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               R ++ L       +   +VF     S+   + +   R++ +      L +      
Sbjct: 138 TDSDRAQEAL-------AGEQQVFKARHDSLLGEISVNRERIQQMQQQIAGLNDMIRTKA 190

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            L  S+  ++  +K L  +  V    L +QER +      L+  + + ++ +        
Sbjct: 191 GLNKSYSGEIKQLKELLAEGFVDNQRLLEQERKLDM----LKTEVADHQSSITKTKLQIG 246

Query: 250 EANLEFANYLK----EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E  L+     K    +++++L   Q    D   K   L     +  I +P +G ++  + 
Sbjct: 247 ETELQIVQLKKKFDADVAKELSDVQAQVFDLQEKEAALRDRLSRVVIRAPESGMVLDMKV 306

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +       + PL+ IVP      + AKV P+ I  ++ G TA VRF  +        + 
Sbjct: 307 HTIGGVVSAATPLLDIVPAQSDLVVEAKVAPRDIDRLELGKTADVRFSAFNQATTPVIEG 366

Query: 366 IIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
            + +I  D ++ ++  +    +YY V +K+T+       N +L+ G PAEVL  A + T+
Sbjct: 367 KLTRISADSLVEERSGD----QYYLVRVKVTEDGMKKLGNRKLQPGMPAEVLINAGDRTM 422

Query: 423 AQEIIHP 429
            Q ++ P
Sbjct: 423 LQYLLKP 429


>gi|89074017|ref|ZP_01160518.1| putative RTX transport protein [Photobacterium sp. SKA34]
 gi|89050155|gb|EAR55666.1| putative RTX transport protein [Photobacterium sp. SKA34]
          Length = 437

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 194/453 (42%), Gaps = 68/453 (15%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  W N K  H    +++  L  + +I +ITW+    +E      G+++    + +I+S 
Sbjct: 4   NLKWANQK--HAYRSRKIVWLCSLLVISIITWAAYSKLE--EVGDGKVVPTLAIQKIQSL 59

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKS 115
             GII++  V+ G Q+ +G PL+  +D        E+ +     +  IK L+  +DT K 
Sbjct: 60  EGGIIEQVLVKAGEQVKKGQPLIILDDTRFRTAFQESDEHYRTLQAQIKRLKAELDTVK- 118

Query: 116 ALDFLNNKYDVLEKAFE-SREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLK-MKLTRMR 172
               +N K    +K    S +    D L K     +K  +N  I  +   L+  +LT  +
Sbjct: 119 ----VNTKEKDWKKQITISHQAIAFDDLSKRAQLNAKANYNERIGQIESQLEEAQLTIEQ 174

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER----------- 221
                R D ++ +S L + L    K+  M++   ++ AV++ +L Q  R           
Sbjct: 175 QTEALR-DAKSNTSTLYSSLRLVNKEAKMLEGAVKRGAVAEVELIQTRRDQVKLRGEIAS 233

Query: 222 ---IVYKSTLELRENIHEQKNML----RHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                 K++  LRE I  ++N+       +    +EA  +FA         LE +Q   A
Sbjct: 234 SKVAQQKTSAALREAIVMRRNLALEFRTSVQAQLNEATNQFAQ--------LEDSQEGLA 285

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           D++ +            I +P+ GTI      S     +  +P+M++VP+     + A++
Sbjct: 286 DQLKR----------TEITAPMDGTIKDILVRSLGGVVKPGEPIMELVPNDSKLIVEARI 335

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE---YYEVIL 391
           +P+ I  V KG  AT++F  Y  +     K  +  +        + LQT++   YY   +
Sbjct: 336 SPQDIAFVSKGLEATIKFTAYDFVVYGGRKGTVTYVSA------DALQTEDGTAYYRAHI 389

Query: 392 KITDLAFSDNNIELRNGFPAEV-LFTAKNTTLA 423
           ++ D    D  +++  G  A V + T + T L+
Sbjct: 390 QLHD--DPDTRLQVIPGMQAMVDILTGEKTVLS 420


>gi|60265603|gb|AAX15948.1| PrtC [Xenorhabdus nematophila]
          Length = 445

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/421 (19%), Positives = 174/421 (41%), Gaps = 33/421 (7%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           IGI+G + W+   P++  V+SSG ++ + N   ++SP +GII++ QV+ G Q+  G  L+
Sbjct: 35  IGILGFLIWAAFAPLDKGVASSGTVVVDGNRKTVQSPANGIIRQIQVKEGQQVKAGQVLV 94

Query: 86  TFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
               ++    ID  K  +         +  E+  +D +     +L +  E R    L   
Sbjct: 95  QLSQVQVNAQIDSFKQQLYTTLATEARLLAEQQGIDDIVFPSALLNQQSEPRINDTLALQ 154

Query: 143 GKYHSTCSKVFN---YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
            +  ++  ++      G+      L  ++  +R   +++   +          SS ++ +
Sbjct: 155 KQLFASRREMLRSDLAGMRQAEEGLNFQIKGLREARVSKQQQQ----------SSLKEQI 204

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---- 255
             ++ L E+    +N   +    + +S  EL  ++ E    +  + +   E         
Sbjct: 205 ANLRPLTEEGYFPRNRYLE----LLRSQSELSGSLAEMTGRMGQLEKQQQETQQRVIQRQ 260

Query: 256 ANYLKEISRDLEQNQRTFADEM-SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
           A+Y +E+   L   Q   A+E+ +KL   +      +I++P+ G++V    F+       
Sbjct: 261 ADYQREVRTQLADVQ-VLANELRNKLEAAQFDLSHTSIIAPVEGSVVGLTVFTQGGVVAS 319

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF--KAIIEKIDP 372
            + LM+I+P      + A++    I  +  G    + F  +   R  K   K  +   D 
Sbjct: 320 GEKLMEILPAQSALEVEARLMVHLIDKIAVGQDVDLMFTAFNQSRTPKVTGKVTVVSADR 379

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           ++    + +  + YY++ L++          + ++ G P EV     + +L   +  P+ 
Sbjct: 380 LV----DGITREPYYQMRLRVAPEGMEKLAGLNIKPGMPVEVFVKTGSRSLLSYLFKPLM 435

Query: 432 D 432
           D
Sbjct: 436 D 436


>gi|300724810|ref|YP_003714135.1| Alkaline protease secretion protein aprE [Xenorhabdus nematophila
           ATCC 19061]
 gi|297631352|emb|CBJ92047.1| Alkaline protease secretion protein aprE [Xenorhabdus nematophila
           ATCC 19061]
          Length = 445

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/421 (19%), Positives = 174/421 (41%), Gaps = 33/421 (7%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           IGI+G + W+   P++  V+SSG ++ + N   ++SP +GII++ QV+ G Q+  G  L+
Sbjct: 35  IGILGFLIWAAFAPLDKGVASSGMVVVDGNRKTVQSPANGIIRQIQVKEGQQVKAGQVLV 94

Query: 86  TFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
               ++    ID  K  +         +  E+  +D +     +L +  E R    L   
Sbjct: 95  QLSQVQVNAQIDSFKQQLYTTLATEARLLAEQQGIDDIVFPSALLNQQSEPRINDTLALQ 154

Query: 143 GKYHSTCSKVFN---YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
            +  ++  ++      G+      L  ++  +R   +++   +          SS ++ +
Sbjct: 155 KQLFASRREMLRSDLAGMRQAEEGLNFQIKGLREARVSKQQQQ----------SSLKEQI 204

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---- 255
             ++ L E+    +N   +    + +S  EL  ++ E    +  + +   E         
Sbjct: 205 ANLRPLTEEGYFPRNRYLE----LLRSQSELSGSLAEMTGRMGQLEKQQQETQQRVIQRQ 260

Query: 256 ANYLKEISRDLEQNQRTFADEM-SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
           A+Y +E+   L   Q   A+E+ +KL   +      +I++P+ G++V    F+       
Sbjct: 261 ADYQREVRTQLADVQ-VLANELRNKLEAAQFDLSHTSIIAPVEGSVVGLTVFTQGGVVAS 319

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF--KAIIEKIDP 372
            + LM+I+P      + A++    I  +  G    + F  +   R  K   K  +   D 
Sbjct: 320 GEKLMEILPAQSALEVEARLMVHLIDKIAVGQDVDLMFTAFNQSRTPKVTGKVTVVSADR 379

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           ++    + +  + YY++ L++          + ++ G P EV     + +L   +  P+ 
Sbjct: 380 LV----DGITREPYYQMRLRVAPEGMEKLAGLNIKPGMPVEVFVKTGSRSLLSYLFKPLM 435

Query: 432 D 432
           D
Sbjct: 436 D 436


>gi|169144770|gb|ACA49155.1| EsfB [Serratia marcescens]
          Length = 443

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 81/421 (19%), Positives = 171/421 (40%), Gaps = 18/421 (4%)

Query: 19  RMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+  L++ +G+ G + W+   P++  V+S G +    N   +++P SGIIK   V++G +
Sbjct: 25  RLGWLALGVGVFGFLAWAAFAPLDKGVASPGSVTVSGNRKTVQAPASGIIKNIVVKDGDK 84

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREE 136
           +  G  L+    ++    +D       +LR    T  +    L  + D L K  F     
Sbjct: 85  VKAGEVLVQLSQVQAQAQVD-------SLRDQYYTTLATEGRLLAERDGLSKVTFSPVFA 137

Query: 137 QLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           Q+ D   + +  +  +++F      +   +      M  I      L++  +  +  LSS
Sbjct: 138 QVKDQPRVAEIIALQTQLFASRRQGLQSEIDGYKQSMDGIRFQLKGLQDSRANKQIQLSS 197

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++ +  MK L     + +N   + +R   +    + E +     + + + E     +  
Sbjct: 198 LREQMNSMKQLAADGYLPRNRYLEIQRQFAEVNSSIDETVGRIGQLQKQLQESQQRIDQR 257

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
           FA+Y +E+   L Q Q   ++  +KL + +       I SP+ GT+V    F+       
Sbjct: 258 FADYQREVRTQLAQTQMDASEFRNKLQMADFDLGNTAITSPVDGTVVGLNIFTQGGVVGA 317

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DP 372
              LM +VP      + +++    I  V  G    + F  +   +  K    +  +  D 
Sbjct: 318 GDHLMDVVPSQATLVVDSRLKVDLIDKVYNGLPVDLMFTAFNQNKTPKIPGTVTLVSADR 377

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           ++ + +     + YY++ + ++       +  +++ G P EV     + +L   +  PI 
Sbjct: 378 LVDKTNG----EPYYQMQVTVSPEGMKMLSGEDIKPGMPVEVFVKTGSRSLLSYLFKPIL 433

Query: 432 D 432
           D
Sbjct: 434 D 434


>gi|298528905|ref|ZP_07016308.1| type I secretion membrane fusion protein, HlyD family
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510341|gb|EFI34244.1| type I secretion membrane fusion protein, HlyD family
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 457

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 92/451 (20%), Positives = 186/451 (41%), Gaps = 46/451 (10%)

Query: 12  NHPASLKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N P S + + +  ++ +     G+  W+    +E +V + G+I+ E    +++    GI+
Sbjct: 26  NLPTSSRNVIIAGLLFVALFFGGIGVWAATANLEGAVIAQGDIIVETYRQQVQHRDGGIV 85

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKY 124
           K  +V  G Q+ +G  L+T +  E     D+ +  + +    +  +  E    D +    
Sbjct: 86  KDIKVREGYQVEKGDVLITLDGEEVRAQRDMYRARMDSFLARQARLMAEIQNADSIEWPL 145

Query: 125 DVLEK-----AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            +LE+     A ES E +   F  +  +  S++           L+ ++    S+   R 
Sbjct: 146 ALLERSHLPDATESMESEEQIFKSRMEAKNSRI---------ELLRAQINTQNSLIHGR- 195

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             E +   +   +SS ++++     L E   +   ++ + +R +  +    R N  E   
Sbjct: 196 --ERQLQSIEDTISSLEEEIQAKDPLLEGGFIDITEILELQRTLNSN----RANKEELTT 249

Query: 240 MLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            +    E   E  LE  +    Y +E + +L   ++   D   ++   E    +  + +P
Sbjct: 250 EIDQAEERIKELELEITDLEKSYAQEAASELGDVRQEIVDLREQMRPAEDAARRLNVTAP 309

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            AG +V  +  +     Q  +PLM+IVP      + AKV P +I  V+KG  A+V    +
Sbjct: 310 KAGVVVNLEVRTEGGVIQGGEPLMEIVPRDTGLIVSAKVDPDKIDDVRKGQDASVMLSAF 369

Query: 356 ADIREKKFKAII-----EKIDPIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRN 407
                 K K ++     ++ +P   Q+D       YY   +++   +     D+  +L  
Sbjct: 370 PRRYTPKVKGVVTYVAADRTEP--EQRDE----PPYYLTYVQLDQQSLKDAIDDPGKLTP 423

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G PAEV    +  T+   ++ PI D+  + F
Sbjct: 424 GMPAEVYIQTEAQTVMSYVLSPIIDSMDRAF 454


>gi|116250394|ref|YP_766232.1| HlyD family secretion protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255042|emb|CAK06116.1| putative HlyD family secretion protein [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 486

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 91/443 (20%), Positives = 188/443 (42%), Gaps = 56/443 (12%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL ++ I+GL  WS+L P++ +  +SG I  E +   I+    GI+++  V+NG  ++ G
Sbjct: 71  LLILVFIVGLGIWSVLAPLKSAAIASGVIEPESSRKTIQHLEGGIVRRILVKNGDAVMGG 130

Query: 82  TPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             ++  +D ++    D I  +    +  R  +  E++  D +    D L  A +      
Sbjct: 131 QIVIELDDTKSRSERDSIQGQLWDAEGSRARLLAEQTGGDRVAYPDD-LRAAMD------ 183

Query: 139 LDFLGKYHSTCS------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL--RA 190
                +Y S  +      K+F      +   +++   ++  +    + L  + + L  RA
Sbjct: 184 -----RYPSVSAILIGQQKIFEARRRVMQAEIQIANEKIAQVRQEIVGLGAQKAALADRA 238

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV----YKSTLELRENIHEQKNMLRHINE 246
            +SS + D   +        +S   L ++ R++     K+ L+      +Q  +   I+ 
Sbjct: 239 TISSQELDQVTI--------LSAKGLERRSRLLNLQREKADLD-----GQQGQVEAQISR 285

Query: 247 LY--------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            Y        D A LE ++ L E+++ +   +        +L  ++    +  I +P  G
Sbjct: 286 AYQVISGSQADLAKLE-SDRLSEVAQGMRDTESRIMQLRERLRAIDDQLSRTDIRAPEDG 344

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           TI+  +  +S       +PL+ ++P +    + A V P+ I  V+ G  A V    Y   
Sbjct: 345 TIMNLRVHTSGGVIGAGEPLVDLLPRTDRLVVSAHVRPEDIHLVRAGLEAQVHLLPYNQR 404

Query: 359 REKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLF 415
           R    K  +E +  D +   Q      Q Y+   +++TD   +  +++EL  G P + L 
Sbjct: 405 RVPLLKGRVEYVSADRLTDPQSG----QPYFAATIRVTDERLAKMSDVELVAGMPTQTLI 460

Query: 416 TAKNTTLAQEIIHPITDNWPKIF 438
               +++A   + P+ D++ + F
Sbjct: 461 ETGQSSVALYAVRPLLDSFNRAF 483


>gi|15596444|ref|NP_249938.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           PAO1]
 gi|107100696|ref|ZP_01364614.1| hypothetical protein PaerPA_01001723 [Pseudomonas aeruginosa PACS2]
 gi|218892779|ref|YP_002441648.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           LESB58]
 gi|254234374|ref|ZP_04927697.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           C3719]
 gi|254239623|ref|ZP_04932945.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           2192]
 gi|12230884|sp|Q03025|APRE_PSEAE RecName: Full=Alkaline protease secretion protein AprE
 gi|9947178|gb|AAG04636.1|AE004554_4 alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           PAO1]
 gi|126166305|gb|EAZ51816.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           C3719]
 gi|126193001|gb|EAZ57064.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           2192]
 gi|218773007|emb|CAW28819.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           LESB58]
          Length = 432

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 85/441 (19%), Positives = 176/441 (39%), Gaps = 31/441 (7%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M + +KR+  A  +   LL + G  G + W+   P++  V+    ++       ++ P  
Sbjct: 1   MTRTVKRDENAYARLGWLLVLFGFGGALLWAAFAPLDQGVAVPATVIISGQRKSVQHPLG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++K   V +G  +  G PL+  E  +    +D    S+ N   +    ++ L    +  
Sbjct: 61  GVVKHILVRDGQHVEAGEPLIRMEPTQARANVD----SLLNRYANARLNQARLQAEYDGR 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFN---YGISSVYRSLKMKLTRMRSIYLNRLDL 181
             LE      E+  L  LG+      ++ +     +++   +L+  +  +R+        
Sbjct: 117 RTLEMPAGLAEQAPLPTLGERLELQRQLLHSRQTALANELSALRANIEGLRAQLEGLRQT 176

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E    L + LL+S    L+  ++L E+  + +N L +QER       E+   + E     
Sbjct: 177 EGNQRLQQRLLNSQ---LSGARDLAEEGYMPRNQLLEQER----QLAEVNARLSESSGRF 229

Query: 242 RHINELYDEANLEFAN----YLKEISRDLEQ---NQRTFADEMSKLTILEKTREQKTILS 294
             I +   EA +  A     Y KE++  L +   N RT  +E+S      +  E   I +
Sbjct: 230 GQIRQSIAEAQMRIAQREEEYRKEVNGQLAETQVNARTLWEELSSARYELRHAE---IRA 286

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P++G +   + F+        + LM IVP+S    +  ++    +  +  G    + F  
Sbjct: 287 PVSGYVAGLKVFTDGGVIGPGELLMYIVPNSDSLEVEGQLAVNLVDRIHSGLPVEMLFTA 346

Query: 355 YADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPA 411
           +   +  +    +  +  D ++ +Q+     Q YY +  ++   A      +++R G   
Sbjct: 347 FNQSKTPRVTGEVTMVSADRLLDEQNK----QPYYALRAQVDAAAMGKLKGLQIRPGMAV 402

Query: 412 EVLFTAKNTTLAQEIIHPITD 432
           +V       +L   +  P+ D
Sbjct: 403 QVFVRTGERSLLNYLFKPLFD 423


>gi|86748763|ref|YP_485259.1| Type I secretion membrane fusion protein, HlyD [Rhodopseudomonas
           palustris HaA2]
 gi|86571791|gb|ABD06348.1| Type I secretion membrane fusion protein, HlyD [Rhodopseudomonas
           palustris HaA2]
          Length = 445

 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 93/440 (21%), Positives = 188/440 (42%), Gaps = 52/440 (11%)

Query: 25  IIGII--GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +IG+    +  WS+  P+  +  +SG +  + +   ++    GI+++  V  G  +  G 
Sbjct: 27  VIGVFLFAMTAWSVGAPMSSAAIASGVVSPDGSRKTLQHLEGGIVRELLVREGDHVQAGQ 86

Query: 83  PLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALD-------FLNNKYDVLEKAFE 132
            L+  +  +       K+   + ++ +R   ++    L+        L++K +    AF 
Sbjct: 87  VLMRLDLTQARANFTAKRDEWLRLQAIRARYESHGLNLEEMRIPQVLLDDKSEEF-TAFI 145

Query: 133 SREEQLLDFLGKYHSTCSK--VFNYGISSVYRSLKMK------LTRMRSIYLNRLDLENK 184
             E++L  F G+     ++  ++N  I  +   +  K      L +MR  ++N  ++ +K
Sbjct: 146 ENEKKL--FEGRRLEVIAREDIYNQQIKQIEAEINGKHLEREGLDKMRG-FINE-EIGDK 201

Query: 185 SSLLRALLSSHQKDLTMMKN---LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           S LL   L    + L + +    L  K  V+ +D+ + E           + I E    +
Sbjct: 202 SGLLLQNLVRKPEVLALQRTEAELTSKIGVNLSDIGRAE-----------QKIKEVLLAM 250

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R +   + + N E    L +++RD+ Q + +  +      IL +T     +++P++GT++
Sbjct: 251 RAVQTKFRDENSE---QLMKVTRDIAQIEGSLTNTGD---ILSRT----DLIAPVSGTVL 300

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +  +     +    ++ IVP   +  I AK++P  I  V+ G  A V F  Y   R  
Sbjct: 301 QLRFKTVGGVVKAGDQILDIVPDDDVLVIDAKLSPTDIDVVRVGMPAQVHFDAYVSRRTP 360

Query: 362 KFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
            F+ ++  +  D I+ Q   N   Q YY+V ++I         +I L  G PAE      
Sbjct: 361 MFEGVVNHVSSDAIVDQAAANALQQRYYQVKVQIDRKQIDQYKHITLVPGMPAEAFIMTG 420

Query: 419 NTTLAQEIIHPITDNWPKIF 438
             TL + +  PI  ++ + F
Sbjct: 421 TRTLFEYLTAPILTSFRRAF 440


>gi|84501458|ref|ZP_00999663.1| putative transport protein [Oceanicola batsensis HTCC2597]
 gi|84390749|gb|EAQ03237.1| putative transport protein [Oceanicola batsensis HTCC2597]
          Length = 446

 Score = 73.2 bits (178), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 100/446 (22%), Positives = 183/446 (41%), Gaps = 41/446 (9%)

Query: 14  PASLKRMT----LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           P S+ R      LL  I   G   W+ L P+  +V S G  +       ++    GIIK 
Sbjct: 18  PRSIARQATIGLLLMAITFGGFGAWAFLAPLAAAVISQGSFVAIGQNKIVQHLEGGIIKD 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-IDTEKSAL----DFLNNKY 124
             V+ G Q+  G  LL  +  ET  L + +++ ++  R   I+    AL    + L    
Sbjct: 78  ILVDEGDQVQAGQLLLRLD--ETKALANERELVLRLSRLEAIEARLLALYDGKERLTFPP 135

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            ++E++  +   Q+L        + ++     I+ + R              NR  L  +
Sbjct: 136 HLIEQSERAEIRQILAGQQTAFDSATEGLQNEIALLER--------------NRAALAVR 181

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAV--SQNDLNQQERIVYKSTL-ELRENIHEQKNML 241
           S+   A L+SH + + +++  F    +   +  + + E    K TL E    I   +  +
Sbjct: 182 SAGYEAQLASHNEQVELLEEEFAARDILLGKGLMRRAEMTALKRTLVEAAGQIGRLEAEI 241

Query: 242 RHINELYDEANLEFANYLKEISR----DLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             I +L  +  ++ A  +++  +    DL+  Q        +L      RE+  +++P++
Sbjct: 242 GEIEQLSHKYEMQIAQTVRQHQQSALDDLQPIQGELDSIREQLAAARNVRERTDVIAPVS 301

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+V     ++    +  + + +I+P  +   I  +V    I  V+KG  AT+R     +
Sbjct: 302 GTVVRLHYHTAGGVIESGRAIAEILPSEQPLIIEVQVPRVDIDSVRKGQHATIRLTAL-N 360

Query: 358 IREKKF---KAIIEKIDPIISQQDNNLQTQEYY--EVILKITDLAFSDNNIELRNGFPAE 412
            R       K I    D +   Q+ N  TQE Y   + + +T+L     N     G PAE
Sbjct: 361 RRTTPILYGKVIYVSADSVTDTQNGN--TQEVYIARISMPVTELRRV-ANFTPTPGMPAE 417

Query: 413 VLFTAKNTTLAQEIIHPITDNWPKIF 438
           ++      T AQ I+ PI D+  + F
Sbjct: 418 IMIQTAERTFAQYIVKPIRDSLGRAF 443


>gi|56752200|ref|YP_172901.1| hemolysin secretion protein [Synechococcus elongatus PCC 6301]
 gi|81300713|ref|YP_400921.1| hemolysin secretion protein-like [Synechococcus elongatus PCC 7942]
 gi|56687159|dbj|BAD80381.1| similar to hemolysin secretion protein [Synechococcus elongatus PCC
           6301]
 gi|81169594|gb|ABB57934.1| hemolysin secretion protein-like [Synechococcus elongatus PCC 7942]
          Length = 441

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/374 (20%), Positives = 169/374 (45%), Gaps = 55/374 (14%)

Query: 19  RMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+T+ +++G+    T W+ +  I+ +V   G++  +  V ++++P  G++++ +V+ G +
Sbjct: 38  RLTIWTLVGVTASATAWACIAQIDEAVQVQGQLEPKAAVKDVQAPVGGVLERLEVKEGQR 97

Query: 78  ILQGTPLLTFEDIETTD----LIDLKKVSI---KNLRCHID--TEKSALDFLNNKYDVLE 128
           + QG  L  F      +    L ++++  +   +  R  I   +E S       + +   
Sbjct: 98  VTQGQILARFNATTVAERIRSLTEIRERLVAENQTFRAQIGESSEGSVSVNQQQRIEAAR 157

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           + FESR+E                          + +++ ++++     +L +E++   +
Sbjct: 158 REFESRQE--------------------------AARLEASQLKQ---QQLQVESELQQV 188

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L  +Q+ L  ++ L+E+  +++    +QE  V +    LR+N  E    L+ +    
Sbjct: 189 RYSLDLNQRILNDLRPLYEEGGIARTQYLKQEETVSQLESTLRKNQAE----LQRLQFAV 244

Query: 249 DEANLEFANY----LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +A     N       E    +E+N R  A+  S++T  ++T + + + +P +GT V++ 
Sbjct: 245 SQAEARLTNTQTVTFSEARGRIEENARRIAEIDSQITEAKQTLKYQIVRAPQSGT-VFDI 303

Query: 305 SFSSSNY-AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR-----FPHYADI 358
           +     Y A  S+PLMK+VP  +L   R  +  K I  V+ G    +R     F  Y D+
Sbjct: 304 TAQGPGYVANTSEPLMKLVPDDELV-ARLYIPNKDIGFVRTGQDVDIRIDSYPFSEYGDL 362

Query: 359 REKKFKAIIEKIDP 372
           + K  +   + + P
Sbjct: 363 KGKLTRVGSDSLPP 376


>gi|253687800|ref|YP_003016990.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754378|gb|ACT12454.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 452

 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 90/432 (20%), Positives = 172/432 (39%), Gaps = 39/432 (9%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           LK    L +IG  GL+ W+ + P++  V+ SG ++  DN   ++   SG I    V +G 
Sbjct: 35  LKHGLWLVLIGFGGLLLWAGMAPLDKGVAVSGRVIVADNRKAVQPVSSGRIASLTVRDGD 94

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESRE 135
           ++  G  L T +        D       NL   + +        L  + D+   AF +  
Sbjct: 95  RVQAGQVLATLDQTPAQAQRD-------NLVTQLQEAHAGEARLLAERDDLSTIAFPAPT 147

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR-SIYLNRLDLENKSSLLRALLSS 194
           EQ        HST ++        ++ S +  L + R ++    +  + +S   +ALL+S
Sbjct: 148 EQ--------HSTVTQQIQIAQQQLFISRRAALQQERTAMQAAIIGAKAQSQGSQALLAS 199

Query: 195 HQ-------KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            Q       + L  ++ L ++  +++N L   ER       +L   I +++N    + + 
Sbjct: 200 SQTQFQIISEQLRGLRPLAQEGYIARNRLLDVER----QAAQLAGAIAQERNNQVQLQQQ 255

Query: 248 YDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E   +       Y KE+   L   QR+  D   +L   E   +   I +P +GT+V  
Sbjct: 256 VVELEQKIQQRQNEYQKEVRAQLADTQRSIQDLTQRLKTAEYELQHTHIRAPASGTVVGL 315

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +        Q LM+IVP  +   I A++  + +  V  G    + F  +      + 
Sbjct: 316 ALHTEGGVVNSGQMLMEIVPDGQPLLIDAQLPIELVDRVSNGLPVELLFSAFNQSTTPRI 375

Query: 364 KAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
             ++  I  D ++ QQ      + YY + + + +        +++R G P +        
Sbjct: 376 SGVVALIGADQLVEQQTG----KPYYALRIHVDEQGKQQLAGLDVRPGMPVQAFIRTGER 431

Query: 421 TLAQEIIHPITD 432
           +L   +  P++D
Sbjct: 432 SLLNYLFKPLSD 443


>gi|86144280|ref|ZP_01062612.1| HlyD family secretion protein [Vibrio sp. MED222]
 gi|85837179|gb|EAQ55291.1| HlyD family secretion protein [Vibrio sp. MED222]
          Length = 437

 Score = 72.8 bits (177), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 99/444 (22%), Positives = 186/444 (41%), Gaps = 54/444 (12%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +N   +L   T    + +I   TWS++  ++    + G ++ E     ++S   G +K+ 
Sbjct: 19  QNTARTLALATWSVALCVIAFATWSVVTQVDEIAKAKGAVIPEGEKQVLQSAIGGKLKQI 78

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V+ G  + +G PL+ F+          ++ +++ L+    T  ++++ +N         
Sbjct: 79  LVKEGQLVEKGQPLVEFD-------ATFQRTALEELKSQQVTLLASVERMN-------AL 124

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLR 189
            E RE  L +F   Y    S+             K +L   +++Y   R+ LE +S  + 
Sbjct: 125 LEQREPNLAEFEVDYPEIVSQ------------QKAQLNAQKALYFQKRVVLEKESEQIA 172

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L S +K L   +   E NA  Q +LN  E+  YK+    R  + E +  L  I +  +
Sbjct: 173 EQLRSVEKALPSYEK--ELNATKQ-ELNILEK-GYKAGNISRLRVLEMRQKLASIEQKIE 228

Query: 250 EANLEFANYLKE-------ISRDLEQNQRTFADEMSK----LTIL-EKTREQKT------ 291
           EA  + A  +K+       I + L + +   +D+ SK    L+ L  + R  +       
Sbjct: 229 EARGKKAVLIKQADSTEQKIEQLLAEAKAKVSDDRSKAVSDLSALNARVRSSQAKLTNTM 288

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           ++SP+ G +    S  +    Q    +++IVP       +A+++P+ I  V  G    ++
Sbjct: 289 LVSPLQGLVQSLPSTQNGGVIQPGGTVVEIVPVGGKADFKARLSPRDIGFVSVGQPTRIK 348

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGF 409
              +   R    K  +E I P  SQ +     + YYEV++ +    F DN  +  +  G 
Sbjct: 349 IDAFDYSRFGALKGAVESISPTTSQSERG---EIYYEVVVSVDTPYFRDNPESFSILPGM 405

Query: 410 PAEVLFTAKNTTLAQEIIHPITDN 433
             EV  T    ++ Q +  PI  N
Sbjct: 406 TGEVDITTGEKSVFQYLWKPIYTN 429


>gi|153949022|ref|YP_001399133.1| HlyD family hemolysin secretion protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|152960517|gb|ABS47978.1| HlyD family hemolysin secretion protein [Yersinia
           pseudotuberculosis IP 31758]
          Length = 442

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 174/433 (40%), Gaps = 55/433 (12%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L +IG IG + W+ L P++  V+ +G ++  +N   I+    G I++  V  G +I+ G 
Sbjct: 33  LVVIGFIGFLLWAGLAPLDKGVAVTGLLVVAENRKVIQPLQGGRIQQLHVTEGDEIVSGQ 92

Query: 83  PLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR----- 134
            L+T +D       D +  + +S       +  E++ LD +     +LE A +       
Sbjct: 93  LLVTLDDTAIRNQRDNLQHQYLSALAQEARLTAEQNDLDVITFPQALLEHATQPAVERNI 152

Query: 135 --EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             ++QLL    + H          +S + R L  +LTR ++    RLD       L+A+ 
Sbjct: 153 ILQQQLLHHRRQAH----------LSEIAR-LSTQLTRHQA----RLD------GLQAMR 191

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHIN 245
           S+HQ+      NLF++   S   L +   I     LE       L+  + +  + +   +
Sbjct: 192 SNHQRQ----SNLFQQQLDSVQLLAKDGHIAKNKLLEMESQLTSLQARVEQGTSDIAEAH 247

Query: 246 ELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           +L DE           Y  E S  L + Q+   + + +L I E       I +P++G+++
Sbjct: 248 KLIDETEQHVLQRREQYQSENSEQLAKAQQNTQELVQRLNIAEYELSHTRIFAPVSGSVI 307

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +        Q LM+IVP  +  ++ A++  + I  V  G    + F  +      
Sbjct: 308 ALAQHTVGGVVSSGQALMEIVPSGQPLFVEAQLPVELIDKVTVGLPVDLNFSAFNQSNTP 367

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKN 419
           + +  + +I     Q            V + I  T+LA       +R G   +V      
Sbjct: 368 RLQGSVWRIGADRIQPPPTSPPYYPLTVAIDIDPTELA-------IRPGMAVDVFIRTGE 420

Query: 420 TTLAQEIIHPITD 432
            +L   +  P TD
Sbjct: 421 RSLLSYLFKPFTD 433


>gi|313106230|ref|ZP_07792480.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           39016]
 gi|310878982|gb|EFQ37576.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           39016]
          Length = 432

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 85/441 (19%), Positives = 175/441 (39%), Gaps = 31/441 (7%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M + +KR+  A  +   LL + G  G + W+   P++  V+    ++       ++ P  
Sbjct: 1   MTRTVKRDENAYARLGWLLVLFGFGGALLWAAFAPLDQGVAVPATVIISGQRKSVQHPLG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++K   V +G  +  G PL+  E  +    +D    S+ N   +    ++ L       
Sbjct: 61  GVVKHILVRDGQHVEAGEPLIRMEPTQARANVD----SLLNRYANARLNQARLQAEYEGR 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFN---YGISSVYRSLKMKLTRMRSIYLNRLDL 181
             LE      E+  L  LG+      ++ +     +++   +L+  +  +R+        
Sbjct: 117 RTLEMPAGLAEQAPLPTLGERLELQRQLLHSRQTALANELSALRANIEGLRAQLEGLRQT 176

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E    L + LL+S    L+  ++L E+  + +N L +QER       E+   + E     
Sbjct: 177 EGNQRLQQRLLNSQ---LSGARDLAEEGYMPRNQLLEQER----QLAEVNARLSESSGRF 229

Query: 242 RHINELYDEANLEFAN----YLKEISRDLEQ---NQRTFADEMSKLTILEKTREQKTILS 294
             I +   EA +  A     Y KE++  L +   N RT  +E+S      +  E   I +
Sbjct: 230 GQIRQSIAEAQMRIAQREEEYRKEVNGQLAETQVNARTLWEELSSARYELRHAE---IRA 286

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P++G +   + F+        + LM IVP+S    +  ++    +  +  G    + F  
Sbjct: 287 PVSGYVAGLKVFTDGGVIGPGELLMYIVPNSDSLEVEGQLAVNLVDRIHSGLPVEMLFTA 346

Query: 355 YADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPA 411
           +   +  +    +  +  D ++ +Q+     Q YY +  ++   A      +++R G   
Sbjct: 347 FNQSKTPRVTGEVTMVSADRLLDEQNK----QPYYALRAQVDAAAMGKLKGLQIRPGMAV 402

Query: 412 EVLFTAKNTTLAQEIIHPITD 432
           +V       +L   +  P+ D
Sbjct: 403 QVFVRTGERSLLNYLFKPLFD 423


>gi|218676288|ref|YP_002395107.1| ABC transporter: Membrane fusion protein [Vibrio splendidus LGP32]
 gi|218324556|emb|CAV26061.1| ABC transporter: Membrane fusion protein [Vibrio splendidus LGP32]
          Length = 437

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 94/447 (21%), Positives = 180/447 (40%), Gaps = 60/447 (13%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +N   SL   T    + +I   TWS++  ++    + G ++ E     ++S   G +K+ 
Sbjct: 19  QNTARSLALATWSVALCVIAFATWSVVTQVDEIAKAKGAVIPEGEKQVLQSAIGGKLKQI 78

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V+ G  + +G PL+ F+          ++ +++ L+    T  ++++ +N         
Sbjct: 79  LVKEGQLVEKGQPLVEFD-------ATFQRTALEELKSQQVTLLASVERMN-------AL 124

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSL-- 187
            E RE  L +F   Y    S+             K +L   +++Y   R+ LE +S    
Sbjct: 125 LEQREPNLAEFEVDYPEIVSQ------------QKAQLNAQKALYFQKRVVLEKESEQIA 172

Query: 188 --LRAL---LSSHQKDLTMMK---NLFEKNAVSQNDLNQQERIVYKSTLELREN------ 233
             LR++   L S++K+L   K   N+ EK   + N       I     LE+R+       
Sbjct: 173 EQLRSVEKALPSYEKELNATKQELNILEKGYKAGN-------ISRLRVLEMRQKLASIEQ 225

Query: 234 -IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-- 290
            I E +     +    D  + +    L E    +  ++     ++S L    ++ + K  
Sbjct: 226 KIEEARGKKSVLIRQADSNDQKIIQLLAEAKAKVSDDRSKAVSDLSALNARVRSSQAKLT 285

Query: 291 --TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              ++SP+ G +    S  +    Q    +++IVP       +A+++P+ I  V  G   
Sbjct: 286 NTMLVSPLQGLVQSLPSTQNGGVIQPGGTVVEIVPVGGKADFKARLSPRDIGFVSVGQPT 345

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELR 406
            ++   +   R    K  +E I P  SQ +     + YYEV++ +    F DN  +  + 
Sbjct: 346 RIKIDAFDYSRFGALKGAVESISPTTSQSERG---EIYYEVVVSVDTPYFRDNPESFSIL 402

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITDN 433
            G   EV  T    ++ Q +  PI  N
Sbjct: 403 PGMTGEVDITTGEKSVFQYLWKPIYTN 429


>gi|114571039|ref|YP_757719.1| HlyD family type I secretion membrane fusion protein [Maricaulis
           maris MCS10]
 gi|114341501|gb|ABI66781.1| type I secretion membrane fusion protein, HlyD family [Maricaulis
           maris MCS10]
          Length = 436

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 87/437 (19%), Positives = 189/437 (43%), Gaps = 44/437 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++R  L+ +IG+ G + W+ L P+   V ++G+I+ E++   ++    GII +  V +G 
Sbjct: 16  VRRSALVCLIGLGGFLAWAGLAPLAEGVPAAGQIVVENDRQVVQHLEGGIIHELLVRDGD 75

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           Q+  G  LLT +  ET  L          +R  +  E + L     +   L +  E  + 
Sbjct: 76  QVTAGEALLTLQ--ETASL---------AVRDELLQEIATLTGSQQRLAALREGLEEPDF 124

Query: 137 QLLDFLG-------KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS-SLL 188
             LD L           +  S +F   + S +R+    LT  R    +  DL  +   + 
Sbjct: 125 SPLDTLDLTVDQRQAVMARQSDLFRQQMQS-FRADIAVLTARRDGARSSRDLHAQQIRVT 183

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-----LRENIHEQKNMLRH 243
           + ++++ ++ L++++  +E+     ++L   ER V  + LE     LR +  +   + + 
Sbjct: 184 QRVIAAAEEQLSLLRERYERQMARLDELRGMERDV--AALEADISRLRTDAQQAATLEQD 241

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++    +     A +L++IS D  + +        ++   +    +  +++P++G ++  
Sbjct: 242 LDGQIAQTE---AAFLRQISADQLEVRSQLEQAGERIAAAQDVLNRSVVVAPLSGEVLNL 298

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +     +  + +++IVP         +V P     V +G     R   Y     K +
Sbjct: 299 RFATRGGVVRPGEAILEIVPAVGEMTASVRVQPADRAAVYEGQAVRTRLTAY-----KSW 353

Query: 364 KAIIEKIDPIISQQDNNLQTQE-----YYEVILKI-TDLAFSDNNIELRNGFPAEV-LFT 416
             +  ++D  +     +L+T +     YYEV ++I  D A     +++  G P EV +F+
Sbjct: 354 --MTPRLDGEVISVSADLKTDQNTGVSYYEVRIRIPADQAARLGELDVIPGMPVEVFIFS 411

Query: 417 AKNTTLAQEIIHPITDN 433
             + T    +  PI+++
Sbjct: 412 GSSRTTLDYLFEPISES 428


>gi|158424951|ref|YP_001526243.1| membrane fusion protein [Azorhizobium caulinodans ORS 571]
 gi|158331840|dbj|BAF89325.1| membrane fusion protein [Azorhizobium caulinodans ORS 571]
          Length = 472

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 96/443 (21%), Positives = 179/443 (40%), Gaps = 56/443 (12%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           TL  +IG  G  TW++L  ++ +  ++G ++ +     +     GI+K+  V+ G  +  
Sbjct: 58  TLAVLIGFGGFTTWALLANLDSAAVATGTLVVDSKRKTVSHLEGGILKRLLVQEGDVVKL 117

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ--- 137
           G P+   +D                 R   D E+    +   +   L K    R EQ   
Sbjct: 118 GQPVALMDDT----------------RARSDLEQ----YRGRRVGFLAKLARLRAEQSGA 157

Query: 138 -LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK--------SSLL 188
             +DF        + V    + S  R L     R    Y+ +  ++ K        +  L
Sbjct: 158 TQVDFPPPVLDPANPV-AVDVLSAERRL---FQRRHDAYVGKTQIQRKEIEQRIAEAQSL 213

Query: 189 RALLSS--HQKD-----LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            AL+ S   Q+D     LT +K L  K  V++  L +QE  V     EL+  + + +  +
Sbjct: 214 SALIESAERQRDYISERLTGLKELAGKGFVAKAQLLEQEARVS----ELKGRVGDYRAQI 269

Query: 242 RHINELYDEANLEFA----NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +    A    A    ++  +++  L+  Q   A+  +++T  +   ++ T+ +P  
Sbjct: 270 AKSEQAKASAEATLASIDLDWQSDVATQLQDAQLQLAEVENQITSAKDVLDRLTVRAPQD 329

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I   Q  +  +     QP+M +VP  +   + AK+  ++I +V  G  A VR   Y  
Sbjct: 330 GVIANIQFRTPGSAIPAGQPIMDVVPEKEQLVVEAKLGTREIVNVHVGGKAQVRLTAY-- 387

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLF 415
              +    +  KI  + + Q  +  +Q  Y VI    D A  + +  + L  G PAE++ 
Sbjct: 388 -DHRVIPPVDGKIIYVAADQTIDPNSQNAYYVIRASIDAAELEKHPTVSLYPGMPAELMA 446

Query: 416 TAKNTTLAQEIIHPITDNWPKIF 438
             K       +I P+T+++ + F
Sbjct: 447 VRKPRRAIDYLIGPVTESFNRAF 469


>gi|1139568|dbj|BAA08632.1| lipase C [Serratia marcescens]
          Length = 443

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 86/430 (20%), Positives = 168/430 (39%), Gaps = 36/430 (8%)

Query: 19  RMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           RM  L + IG+ G + W+   P++  V+S G +    N   +++P SGIIK   V +G +
Sbjct: 25  RMGWLVVGIGLFGFLAWAAFAPLDKGVASPGSVTVSGNRKTVQAPASGIIKNIAVRDGDK 84

Query: 78  ILQGTPLLTFEDIETTDLID-LKKVSIKNLRCH-----------IDTEKSALDFLNNKYD 125
           +  G  L+    ++    +D L+      L              I T    LD + +K  
Sbjct: 85  VKAGEVLVQLSQVQAQAQVDSLRDQYYTTLATEGRLLAERDGLSIVTFSPILDAVKDKPR 144

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E    + + QL  F  +  +  S++  Y  S            M  I      L++  
Sbjct: 145 VAE--IIALQTQL--FASRRQALQSEIDGYKQS------------MDGIRFQLKGLQDSR 188

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              +  LSS ++ +  MK L     + +N   + +R   +    + E +     + + + 
Sbjct: 189 GNKQIQLSSLREQMNSMKQLAADGYLPRNRYLEVQRQFAEVNSSIDETVGRIGQLQKQLL 248

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E     +  FA+Y +E+   L Q Q   ++  +KL + +       I SP+ GT+V    
Sbjct: 249 ESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLQMADFDLGNTAITSPVDGTVVGLNI 308

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           F+          LM +VP      + +++       V  G    + F  +   +  K   
Sbjct: 309 FTQGGVVGAGDHLMDVVPSQATLVVDSRLKVDLFDKVYNGLPVDLMFTAFNQNKTPKIPG 368

Query: 366 IIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
            +  +  D ++ + +     + YY++ + ++       +  +++ G P EV     + +L
Sbjct: 369 TVTLVSADRLVDKANG----EPYYQMQVTVSPEGMKMLSGEDIKPGMPVEVFVKTGSRSL 424

Query: 423 AQEIIHPITD 432
              +  PI D
Sbjct: 425 LSYLFKPILD 434


>gi|227113044|ref|ZP_03826700.1| protease secretion protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 432

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 86/461 (18%), Positives = 194/461 (42%), Gaps = 71/461 (15%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +  +R+   +++   LL + G  G + W++  P++  V  +G ++   N   ++    
Sbjct: 1   MNQTARRDEKRAVRLGWLLVLAGFGGFLLWALFAPLDKGVMVNGSVVISGNRKVVQHNQG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ K QV++G ++  G  LLT  +++                      +SA + L+ +Y
Sbjct: 61  GIVDKIQVKDGDRVEAGQILLTLNEVDA---------------------RSASEGLDGQY 99

Query: 125 DVL---EKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYR--------SLKMKLTRM 171
             L   E    + +++L D +   +      K   + I+++ R        SLK++   M
Sbjct: 100 LQLVAREGRLLAEQQRLSDMVMTPRLQPLAEKPEMHVITALQRDLLRSRQQSLKLEAEGM 159

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQK-------DLTMMKNLFEKNAVSQNDLNQQERIVY 224
           R+       +E   S  R ++SS QK        L  +++L  +N V +N + + ER++ 
Sbjct: 160 RTSIAG---MEASLSAQRQVMSSKQKQRETLEQQLQGLRSLAAENYVPRNKMLENERLLA 216

Query: 225 KSTLEL----------RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +   ++          R +I +Q  ++    + YD          KE++ +L   +   +
Sbjct: 217 QLNGDIAQLAGDINRTRRDIEQQTLLIAQRQQEYD----------KEVNSELADVRALLS 266

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           D  SK    +       + +P++GT+V  + F+        Q L++IVP  +  ++ A++
Sbjct: 267 DVGSKKEKADFNLANIQMRAPVSGTVVGLKVFTEGGVIAPGQTLLEIVPDDQPVFVDARL 326

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILK 392
             + +  V  G    ++F  +      +    +E +  D ++ ++D +     YY + ++
Sbjct: 327 PVELVDKVWPGLPVELQFVAFNQSTTPRVAGTVELLSADRLLDERDGS----PYYSLRVQ 382

Query: 393 ITDLA-FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           + +    +   +E++ G P +        +    +  P+ D
Sbjct: 383 VDEAGKRALEGLEVKPGMPVQGFVRTGERSFVNYLFKPLMD 423


>gi|22124233|ref|NP_667656.1| HlyD family secretion protein [Yersinia pestis KIM 10]
 gi|45442883|ref|NP_994422.1| HlyD family secretion protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108806101|ref|YP_650017.1| HlyD family secretion protein [Yersinia pestis Antiqua]
 gi|108810214|ref|YP_645981.1| HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|145600778|ref|YP_001164854.1| HlyD family secretion protein [Yersinia pestis Pestoides F]
 gi|150261118|ref|ZP_01917846.1| HlyD family secretion protein [Yersinia pestis CA88-4125]
 gi|162418329|ref|YP_001608192.1| HlyD family hemolysin secretion protein [Yersinia pestis Angola]
 gi|165928373|ref|ZP_02224205.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936987|ref|ZP_02225553.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166009674|ref|ZP_02230572.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166213739|ref|ZP_02239774.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401246|ref|ZP_02306746.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167421099|ref|ZP_02312852.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425990|ref|ZP_02317743.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467887|ref|ZP_02332591.1| HlyD family hemolysin secretion protein [Yersinia pestis FV-1]
 gi|218930919|ref|YP_002348794.1| HlyD family secretion protein [Yersinia pestis CO92]
 gi|229839615|ref|ZP_04459774.1| HlyD family secretion protein [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229841700|ref|ZP_04461856.1| HlyD family secretion protein [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229896704|ref|ZP_04511869.1| HlyD family secretion protein [Yersinia pestis Pestoides A]
 gi|229904746|ref|ZP_04519857.1| HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|270488729|ref|ZP_06205803.1| type I secretion membrane fusion protein, HlyD family [Yersinia
           pestis KIM D27]
 gi|294505569|ref|YP_003569631.1| HlyD family secretion protein [Yersinia pestis Z176003]
 gi|21956997|gb|AAM83907.1|AE013631_3 secretion permease, Type I secretion system [Yersinia pestis KIM
           10]
 gi|45437750|gb|AAS63299.1| HlyD family secretion protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108773862|gb|ABG16381.1| HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|108778014|gb|ABG12072.1| HlyD family secretion protein [Yersinia pestis Antiqua]
 gi|115349530|emb|CAL22504.1| HlyD family secretion protein [Yersinia pestis CO92]
 gi|145212474|gb|ABP41881.1| HlyD family secretion protein [Yersinia pestis Pestoides F]
 gi|149290526|gb|EDM40603.1| HlyD family secretion protein [Yersinia pestis CA88-4125]
 gi|162351144|gb|ABX85092.1| HlyD family hemolysin secretion protein [Yersinia pestis Angola]
 gi|165915229|gb|EDR33840.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165919603|gb|EDR36936.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165991596|gb|EDR43897.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166205141|gb|EDR49621.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961228|gb|EDR57249.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049271|gb|EDR60679.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055138|gb|EDR64937.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229678864|gb|EEO74969.1| HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|229691039|gb|EEO83092.1| HlyD family secretion protein [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229695981|gb|EEO86028.1| HlyD family secretion protein [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229700311|gb|EEO88345.1| HlyD family secretion protein [Yersinia pestis Pestoides A]
 gi|262363636|gb|ACY60357.1| HlyD family secretion protein [Yersinia pestis D106004]
 gi|262367566|gb|ACY64123.1| HlyD family secretion protein [Yersinia pestis D182038]
 gi|270337233|gb|EFA48010.1| type I secretion membrane fusion protein, HlyD family [Yersinia
           pestis KIM D27]
 gi|294356028|gb|ADE66369.1| HlyD family secretion protein [Yersinia pestis Z176003]
 gi|320013483|gb|ADV97054.1| HlyD family secretion protein [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 442

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 175/433 (40%), Gaps = 55/433 (12%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L +IG IG + W+ L P++  V+ +G ++  +N   I+    G I++  V  G +I+ G 
Sbjct: 33  LVVIGFIGFLLWAGLAPLDKGVAVTGLLVVAENRKVIQPLQGGRIQQLHVTEGDEIVSGQ 92

Query: 83  PLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR----- 134
            L+T +D       D +  + +S       +  E++ LD +     +LE A +       
Sbjct: 93  LLVTLDDTAIRNQRDNLQHQYLSALAQEARLTAEQNDLDVITFPQALLEHATQPAVERNI 152

Query: 135 --EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             ++QLL    + H          +S + R L  +LTR ++    RLD       L+A+ 
Sbjct: 153 ILQQQLLHHRRQAH----------LSEIAR-LSTQLTRHQA----RLD------GLQAMR 191

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHIN 245
           S+HQ+      NLF++   S   L +   I     LE       L+  + +  + +   +
Sbjct: 192 SNHQRQ----SNLFQQQLDSVQLLAKDGHIAKNKLLEMESQSTSLQARVEQSTSDIAEAH 247

Query: 246 ELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           +L DE           Y  E S  L + Q+   + + +L I E       I +P++G+++
Sbjct: 248 KLIDETEQHVLQRREQYQSENSEQLAKAQQNTQELVQRLNIAEYELSHTRIFAPVSGSVI 307

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +        Q LM+IVP  +  ++ A++  + I  V  G    + F  +      
Sbjct: 308 ALAQHTVGGVVSSGQALMEIVPSGQPLFVEAQLPVELIDKVAVGLPVDLNFSAFNQSNTP 367

Query: 362 KFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + +  + +I  D I     +         + L  T+LA       +R G   +V      
Sbjct: 368 RLQGSVWRIGADRIQPPPTSPPYYPLTVAIDLDPTELA-------IRPGMAVDVFIRTGE 420

Query: 420 TTLAQEIIHPITD 432
            +L   +  P TD
Sbjct: 421 RSLLSYLFKPFTD 433


>gi|116049199|ref|YP_791998.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|296390374|ref|ZP_06879849.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           PAb1]
 gi|115584420|gb|ABJ10435.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 432

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/441 (19%), Positives = 175/441 (39%), Gaps = 31/441 (7%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M + +KR+  A  +   LL + G  G + W+   P++  V+    ++       ++ P  
Sbjct: 1   MTRTVKRDENAYARLGWLLVLFGFGGALLWAAFAPLDQGVAVPATVIISGQRKSVQHPLG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++K   V +G  +  G PL+  E  +    +D    S+ N   +    ++ L    +  
Sbjct: 61  GVVKHILVRDGQHVEAGEPLIRMEPTQARANVD----SLLNRYANARLNQARLQAEYDGR 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFN---YGISSVYRSLKMKLTRMRSIYLNRLDL 181
             LE      E+  L  LG+      ++ +     +++   +L+  +  +R+        
Sbjct: 117 RTLEMPAGLAEQAPLPTLGERLELQRQLLHSRQTALANELSALRANIEGLRAQLEGLRQT 176

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E    L + LL+S    L+  ++L E+  + +N L +QER       E+   + E     
Sbjct: 177 EGNQRLQQRLLNSQ---LSGARDLAEEGYMPRNQLLEQER----QLAEVNARLSESSGRF 229

Query: 242 RHINELYDEANLEFAN----YLKEISRDLEQ---NQRTFADEMSKLTILEKTREQKTILS 294
             I +   EA +  A     Y KE++  L +   N RT  +E+S      +  E   I +
Sbjct: 230 GQIRQSIAEAQMRIAQREEEYRKEVNGQLAETQVNARTLWEELSSARYELRHAE---IRA 286

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P++G +   + F+        + LM IVP+S    +  ++    +  +  G    + F  
Sbjct: 287 PVSGYVAGLKVFTDGGVIGPGELLMYIVPNSDSLEVEGQLAVNLVDRIHSGLPVEMLFTA 346

Query: 355 YADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPA 411
           +   +  +    +  +  D ++ +Q+     Q YY +  ++          +++R G   
Sbjct: 347 FNQSKTPRVTGEVTMVSADRLLDEQNK----QPYYALRAQVDAAGMGKLKGLQIRPGMAV 402

Query: 412 EVLFTAKNTTLAQEIIHPITD 432
           +V       +L   +  P+ D
Sbjct: 403 QVFVRTGERSLLNYLFKPLFD 423


>gi|259418615|ref|ZP_05742532.1| type I secretion membrane fusion protein, HlyD family [Silicibacter
           sp. TrichCH4B]
 gi|259344837|gb|EEW56691.1| type I secretion membrane fusion protein, HlyD family [Silicibacter
           sp. TrichCH4B]
          Length = 446

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/458 (19%), Positives = 185/458 (40%), Gaps = 53/458 (11%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           ++ + R+  + ++    L I G+ G   W+ + P+  +V S G  +   +   ++    G
Sbjct: 14  YEEVPRSVKSHVRWGMFLLIFGLGGFGIWAFMAPLAAAVISQGSFVATGSNKIVQHLEGG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           IIK   VE G  ++ G P++  +  ET+ L   +++ ++ +R      +   +F  ++ D
Sbjct: 74  IIKAILVEEGENVVAGQPIVLLD--ETSALATQRELFLRQVRLEAMETRILAEF--DRKD 129

Query: 126 VLEKAFESREEQL-LDF-LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            L   +  R E+L  DF +         VFN     +   + +    + ++       E 
Sbjct: 130 TL--IYPPRLEELRADFNVAAMLDGQQIVFNAATQQLRNDINLLTQSIEALKDRSSGYEK 187

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +    RA L   ++D    + L EK  V + + N            LR  + E    +  
Sbjct: 188 QLIATRAQLEILEEDSAAKEILLEKGLVRKTEYNT-----------LRRALAEAIGEIGR 236

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL-TILEKTREQK----------TI 292
           +    DE       Y  +I++ +   Q    DE+  + + LE  REQ            I
Sbjct: 237 LEAQVDETASLSQRYESQITQTIADRQSAALDELQAVQSELESVREQARRAESVLTRTEI 296

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++P++GT++     +     +  + +++I+P  +   I  ++   +I  V+KG  ATV  
Sbjct: 297 VAPVSGTVIRLHYHTPGGVVESGKAILEILPTGEPLIIEVQIPRTEIDVVRKGQAATV-- 354

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ------DNNLQTQEYYEVILKITDLAFSDNNIELR 406
                       A+ ++  P +  +      D  L   +     + +  ++   + ++  
Sbjct: 355 ---------SLTALNQRTTPTLQGEVFYVSADAILDRSQELPQEIYVARISVPPSELDRV 405

Query: 407 NGF------PAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            GF      PA+++   ++ T  Q +I P+TD+  + F
Sbjct: 406 RGFNPTPGMPAQIMIKTQDRTFVQYLIKPVTDSMTRAF 443


>gi|148255704|ref|YP_001240289.1| putative toxin/protease secretion system [Bradyrhizobium sp. BTAi1]
 gi|146407877|gb|ABQ36383.1| putative toxin/protease secretion system [Bradyrhizobium sp. BTAi1]
          Length = 661

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 92/424 (21%), Positives = 170/424 (40%), Gaps = 43/424 (10%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET- 92
           W  L+P+  ++   G ++ + NV  I+ P  GII + +V+NG ++  G  L+  +  ++ 
Sbjct: 259 WLTLVPLAGAIVVPGNLVVQSNVKAIQHPTGGIIAEIKVDNGKRVTAGDLLVRLDATQSQ 318

Query: 93  ------TDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
                 T  ++ ++  I  L   R  +D  +      +   D   +A  + E  L     
Sbjct: 319 AQLQAITKQLNEQRAKIARLSAERDGLDQPEYPTSLTSRPDDAHVRAVIASENALF---- 374

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS-SLLRALLSSHQK----- 197
           K  +T  K     +      L  +++ M S    +LD +NK   L++  L+  Q+     
Sbjct: 375 KARATTRKSQKELLQGRIVQLNNEISGMES----QLDSKNKQIELIKGELAGVQELYDKR 430

Query: 198 --DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              LT +  L  + A    +  Q    +  S  E R  I E +     I++         
Sbjct: 431 LVPLTRLTTLQREAARIDGERGQ----LVSSVAETRSKISEAELQTVKIDQ--------- 477

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            ++  E+ +DL   Q    D + K        ++  + +P +GTI      +     +  
Sbjct: 478 -DFRSEVVKDLGDAQAKEGDLVEKGVAARDQLDRIEMRAPNSGTIHQLAVHTIGGVIKPG 536

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + +M++VP S    + A V PK I HV  G  A VRF  +      +    +  + P I+
Sbjct: 537 ETIMELVPDSDELQVEAHVQPKDIDHVHTGQNAMVRFNAFNQRTTPQLSGQVSFVAPDIT 596

Query: 376 QQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
               +  T  +Y V + +++        + L  G  AEV     + T+   ++ PITD W
Sbjct: 597 NDPRSGST--FYTVRITLSEEERQRLGGVNLMPGMQAEVYVQTGSRTMLSYLMKPITDQW 654

Query: 435 PKIF 438
            + F
Sbjct: 655 RRAF 658


>gi|194292655|ref|YP_002008562.1| proteases secretion protein prte [Cupriavidus taiwanensis LMG
           19424]
 gi|193226559|emb|CAQ72510.1| Proteases secretion protein prtE [Cupriavidus taiwanensis LMG
           19424]
          Length = 446

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/425 (19%), Positives = 160/425 (37%), Gaps = 44/425 (10%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           G+ G + W+ L P++  V   G ++   N   ++ P  GI++K  V++G ++  G  L+T
Sbjct: 38  GLGGFLLWAALAPLDKGVPVGGTVIVSGNRKVVQHPSGGIVEKILVKDGDKVKAGQVLVT 97

Query: 87  FEDIETTDLIDLKKVSIKNLRC------------------HIDTEKSALDFLNNKYDVLE 128
               +     +  +  +   R                    I+ E ++   +     V  
Sbjct: 98  MNHTQARAQAEATRAQLLTARAVEARLLAERDGLADIDFGEIEREAASDPGVAEVVAVQR 157

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           + F SR + L   LG             I+     L+ +L  +R         +NK   L
Sbjct: 158 QLFASRRQALQKELGT------------IAEGITGLQSQLGGLRDAR------QNKQQQL 199

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            AL    ++ L  M+ L  +  + +N L   ER+  +   E+  ++         + EL 
Sbjct: 200 AAL----REQLQNMRELAREGYMPRNRLLDTERLYAQVNGEISADLGTIGRTQSQLTELR 255

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A+L      KE+   L + QR      S+L  L+       + +P++G++V    F+ 
Sbjct: 256 IRASLRREQEQKEVRTLLGEAQRDVRMLRSRLEGLDFDVANTQVRAPVSGSVVGLAIFTQ 315

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                    LM +VP  +   + A+V    I  V  G    + F  +   R  +  A   
Sbjct: 316 GGVVAPGARLMDVVPDGEPLEVEARVPVNLIDKVTSGLPVELMFTAFNQSRTPRIPA--- 372

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEII 427
           ++  + + +    +   YY+V  ++T          ++R G P EV       T+   + 
Sbjct: 373 EVSVVSADRLTEEEGAPYYKVRAQVTPDGMDRLAGHQVRPGMPVEVFIKTGERTMLSYLF 432

Query: 428 HPITD 432
            P+ D
Sbjct: 433 KPVAD 437


>gi|170720592|ref|YP_001748280.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida W619]
 gi|169758595|gb|ACA71911.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida W619]
          Length = 441

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/430 (20%), Positives = 184/430 (42%), Gaps = 63/430 (14%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           GI G  TW+ + P+  +V  SG +  ++    ++    GI+K+    +G  + QG PL+ 
Sbjct: 36  GIFG--TWAAVAPLSNAVHGSGVVTVQNYRKTVQHLEGGIVKELLARDGDMVKQGDPLIV 93

Query: 87  FEDIE-------TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            ++ +       T + + + +     LR   D  ++      +  D  ++A E+   +  
Sbjct: 94  LDEAQLSSEYESTRNQLIVARYKEARLRAERDGLQAIPPVTMDGTDS-DRAMEALAGEQQ 152

Query: 140 DFLGKYHSTCSKVFNYGISSVYRS----LKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            F  ++ +   ++      SV R     +K ++  +  +   + +LE           S+
Sbjct: 153 VFKARHDALQGEI------SVNRERIEQMKQQIAGLNDMIRTKRNLEK----------SY 196

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIV---------YKSTL-ELRENIHEQKNMLRHIN 245
             ++  +K L  +  V    L +QER +         ++ST+ + +  I E +  +  + 
Sbjct: 197 TGEIKQLKELLAEGFVDNQRLLEQERKLDLLKTEVADHESTITKTKLQIGETELQIVQLK 256

Query: 246 ELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
           + +D    + AN L E+     DL++ +    D +S++ I           +P +G ++ 
Sbjct: 257 KKFDS---DVANELSEVQAQVFDLQEKEAALRDRLSRVVIR----------APESGMVLD 303

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +       + PL+ IVP S    + AKV  K I  ++ G TA +RF  +       
Sbjct: 304 MKVHTIGGVVSAATPLLDIVPASSELVVEAKVATKDIDRLELGKTADIRFSAFNQATTPV 363

Query: 363 FKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKN 419
            +  + +I  D +  ++  +     YY V +K+T+       N +L+ G PA+VL  A +
Sbjct: 364 IEGTLIRISADSLTEERTGD----PYYLVRVKVTEDGMEKLGNRKLQPGMPADVLINAGD 419

Query: 420 TTLAQEIIHP 429
            T+ Q ++ P
Sbjct: 420 RTMLQYLLKP 429


>gi|37675993|ref|NP_936389.1| putative RTX transport protein [Vibrio vulnificus YJ016]
 gi|37200533|dbj|BAC96359.1| putative RTX transport protein [Vibrio vulnificus YJ016]
          Length = 442

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/389 (20%), Positives = 163/389 (41%), Gaps = 69/389 (17%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             MW N +  + +  +R+  L    ++ +  W+    ++  V   G+++   ++  I+S 
Sbjct: 4   QIMWSNNRIAYRS--RRLIWLCAALVLAIGVWASWATLDEVVVGDGKVVPSLSIQTIQSL 61

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIE------------TTDLIDLKKVSIKNLRCHI 110
             GIIK+  V  G Q+++G PL+  +D               T L   K++ ++     +
Sbjct: 62  EGGIIKQVLVSQGEQVVKGQPLMVLDDTRFRASYQESDQQLQTLLAQKKRLELELQSIVV 121

Query: 111 DTEKSALD---------FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           D + +            + + + +V    F +RE         YH    +     + S  
Sbjct: 122 DGQATDWQQQVRIAKQPYPSGQDEVTRAEFNARE--------NYHQRLEQ-----LDSEL 168

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
               +++ +    Y + L   N  S L   ++  QK+L M++++ +  AV++ +L + +R
Sbjct: 169 EESALRIEQQSQAYQDTL---NSISTLENSMAIVQKELNMLEDVVKTGAVAEVELLKLKR 225

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDE---------------ANLEFANYLKEISRDL 266
                 ++L+ +I   K + +     Y E               A  +    + E++R L
Sbjct: 226 ----DYVKLQGDISSAKVLAQKQKAAYSESIADYRGIALDFRTKARGQLNEVVAELAR-L 280

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           +++Q   AD++ +            ILSP+ GT+      S     +  +P+M++VP   
Sbjct: 281 QESQSAIADQLRR----------TEILSPVDGTVKDVLIRSIGGVVRPGEPIMELVPLDS 330

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
              + A++ P+ I +VK G  ATV+F  Y
Sbjct: 331 RLIVEARIAPQDIAYVKVGLEATVKFTAY 359


>gi|226943742|ref|YP_002798815.1| type I secretion membrane fusion protein [Azotobacter vinelandii
           DJ]
 gi|226718669|gb|ACO77840.1| Type I secretion membrane fusion protein [Azotobacter vinelandii
           DJ]
          Length = 441

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 86/432 (19%), Positives = 181/432 (41%), Gaps = 53/432 (12%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           GI G  TW+ + P++ +  + G +  +     ++    GI+K+    +G  +  G PL+ 
Sbjct: 36  GIFG--TWAAVAPLDSAALAPGVVTVQTYRKTVQHLEGGIVKELHARDGDMVKAGDPLIV 93

Query: 87  FEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE----KAFESREEQLL 139
            ++ +     ++   + ++ + +   +  E+  L+ +N    +LE    +A E+R+ +  
Sbjct: 94  LDETQIRAENEVTRSQLIAAQAMEARLRAERDNLETINFS-SMLELDSARAREARDGETQ 152

Query: 140 DFLGKYHSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            F  + +S   +  V    I  ++     ++  ++ +   +  L+N          S  K
Sbjct: 153 VFTARRNSRLGEEAVLEKRIGQLHE----QINGLKGVIRTKGSLQN----------SFTK 198

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE-------LYDE 250
           ++  +K L  +  V +  L +QER + K   E+ ++  E   +   INE       L  +
Sbjct: 199 EIRELKELLAEGFVDKQRLLEQERNLDKLRAEIADHSSEITKIRLQINETELQILQLNKD 258

Query: 251 ANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            N +  + L E+     DL++ +    D +S++ I           +P  G I+     +
Sbjct: 259 FNADVVSQLAEVQTKVFDLQEKKSALEDRLSRVVIR----------APEDGMILGMTVHT 308

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                    PL+ IVP      I A+V P  I  V+ G +A +RF  +        +  +
Sbjct: 309 IGGVINPGTPLLDIVPSISDLVIEAQVAPSDIDRVEAGKSADIRFSGFNSRTTPVVEGKV 368

Query: 368 EKI--DPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
            ++  D ++ +++       YY   + +T + A     + L+ G PAEV       T+ Q
Sbjct: 369 LRVSADRLVDEKNG----MPYYLARIGLTEEGARRLGELRLQPGMPAEVYINTGKRTMLQ 424

Query: 425 EIIHPITDNWPK 436
            ++ P TD + +
Sbjct: 425 YLLQPATDAFAR 436


>gi|254466675|ref|ZP_05080086.1| type I secretion membrane fusion protein, HlyD [Rhodobacterales
           bacterium Y4I]
 gi|206687583|gb|EDZ48065.1| type I secretion membrane fusion protein, HlyD [Rhodobacterales
           bacterium Y4I]
          Length = 392

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/422 (19%), Positives = 172/422 (40%), Gaps = 59/422 (13%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S  R+  L++  ++  + W+    I+  V   G++++      +++   GI+ +  V 
Sbjct: 15  PRSASRIIYLALAAVLTFLIWAAFASIDEIVRGEGQVVSSSRAQIVQNLEGGILAELHVR 74

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L   +D +                      ++A D L N+ D L+     
Sbjct: 75  QGDIVTAGQVLAKLQDTKF---------------------RAAADELQNQIDALDIKRFR 113

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            E Q+    G +  +  ++       +  S +  LT  ++ + +R D        R ++ 
Sbjct: 114 LEAQM---KGAFEFSVPEMLAQRSPGILASERGLLTARQTDFTSRRDSA------RQIME 164

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               +L  M+ L+++  V+  ++N+      K+  + R             NE+  +A L
Sbjct: 165 QLNGELANMEQLYKQKIVALIEVNK----ARKAATDARAK----------YNEIGTQAEL 210

Query: 254 EFANYLKEISRD---LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           E A    +  RD   L Q QR   D++++ TI         I SP+AG +      +   
Sbjct: 211 EQAEEYSQTLRDLTTLRQEQRLAVDQLNR-TI---------ITSPMAGIVNSLAVTTIGG 260

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  + +++I+P  +  ++ A+V P+ I  V+ G  AT++   Y        +  ++ +
Sbjct: 261 VIRPGEEILEIIPLGEELFVEARVKPEDIASVQPGQDATIKLSAYDYTIYGSLRGKVDFV 320

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                + + N + + YY V +++    F++   +IE+R G  A         T+ Q ++ 
Sbjct: 321 SADTFEDERNPRAEPYYRVTVRVDKSGFTERQQSIEIRPGMRATAELQTGAKTVLQYLLK 380

Query: 429 PI 430
           P+
Sbjct: 381 PL 382


>gi|312174228|emb|CBX82481.1| Type I secretion system, membrane-fusion protein [Erwinia amylovora
           ATCC BAA-2158]
          Length = 443

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 88/427 (20%), Positives = 175/427 (40%), Gaps = 30/427 (7%)

Query: 19  RMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           RM  L++ +G+ G + W+   P++  V+S G +    N   +++P SGII    V+ G +
Sbjct: 25  RMGWLALGVGLFGFLAWAAFAPLDKGVASPGTVTVSGNSKTVQAPASGIINNIAVKEGDK 84

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREE 136
           +  G  L+    ++    +D       +LR    T  +    L  + D L +  F     
Sbjct: 85  VKAGAVLVQLSQVQAQAQVD-------SLRDRYYTTLATEGRLLAERDGLNQVTFSPIFA 137

Query: 137 QLLD--FLGKYHSTCSKVF---NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           Q+ D   + +  +  +++F     G+ S     K  +  MR        L++  +  +  
Sbjct: 138 QVKDQPRVVEIIALQTQLFASRRQGLQSEIDGYKQSMDGMR---FQLKGLQDSRANKQIQ 194

Query: 192 LSSHQKDLTMMKNLFEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           LSS ++ +  MK L     + +N   D+ +Q   V  S+ E    I + +  L+   +  
Sbjct: 195 LSSLREQMNSMKQLAADGYLPRNRYLDVQRQFAEVSSSSNETAGRIGQLQKQLQESQQRI 254

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D+    FA+Y +E+   L Q Q   ++  +KL + +       I SP+ GT+V    F+ 
Sbjct: 255 DQ---RFADYQREVRTQLAQTQMDISEFRNKLQMADFDLGNTAITSPVDGTVVGLNIFTQ 311

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                    LM +VP      + + +    I  V +G    + F  +   +  K    + 
Sbjct: 312 GGVVGAGDHLMDVVPSQAALVVDSHLKVDLIDKVYQGLPVDLMFTAFNQNKTPKIPGTVT 371

Query: 369 KI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
            +  D ++    +    + YY + + ++    +  +  +++ G P EV     + +L   
Sbjct: 372 LVSADRLV----DKTSGEPYYRMQVTVSPEGMAMLSGEDIKPGMPVEVFVKTGSRSLLSY 427

Query: 426 IIHPITD 432
           +  PI D
Sbjct: 428 LFKPILD 434


>gi|163795078|ref|ZP_02189046.1| Type I secretion membrane fusion protein, HlyD [alpha
           proteobacterium BAL199]
 gi|159179476|gb|EDP64005.1| Type I secretion membrane fusion protein, HlyD [alpha
           proteobacterium BAL199]
          Length = 450

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 83/420 (19%), Positives = 171/420 (40%), Gaps = 39/420 (9%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           G+ GL  W+ L P+E    + G++    N   ++    G+IK+  V  G ++ +G PL+ 
Sbjct: 45  GLFGL--WAALAPLESGAVAQGQVQVVGNQRVVQHLEGGLIKQILVREGERVKKGQPLVV 102

Query: 87  FEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD--- 140
            +        D +  + ++       +  E++    +    +++  A +     +LD   
Sbjct: 103 LDGTRARTQFDRVHQQYLAALGREARLLAERTDTPVIKFPEELIRAAGQPGVADILDGEQ 162

Query: 141 --FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
             F G+  +         +SS    L  ++ + R   +  L+ + +S   R  L+   ++
Sbjct: 163 RLFDGRRAA---------VSSQLSLLDRRIDKARE-EITALNAQQRSD--RRQLAIINEE 210

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVY--KSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +  ++ L+EK       L ++ R++   ++  EL  +I  ++ +     +   E   + +
Sbjct: 211 IVGVRELYEKG------LERKPRLLALQRTEAELEGSIDNRQALKARAGQAVSETEFQKS 264

Query: 257 NYLK----EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNY 311
             ++    EI  DL   Q    D   +LT  +    + TI +P AG  VY   F +    
Sbjct: 265 GLVESTTAEIETDLRAAQIELEDLRQQLTAAQDALTRTTIDAPEAGK-VYGLRFHTHGGV 323

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 ++ +VP  +   ++ ++ P  I  VK+G  ATVR   +     K     + +I 
Sbjct: 324 VAPGDAILNLVPDDEELIVKVQLDPNDIDTVKEGAAATVRLTSFNQRTFKPIDGTVTQIS 383

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           P + Q +       +YE  +++        N+E+  G PA  +      T+   +I PI 
Sbjct: 384 PDVVQPEKG---PPFYEARIRLDAEMMKRLNVEIVPGMPAMAIIATGEQTMLDYLISPIA 440


>gi|170026290|ref|YP_001722795.1| HlyD family type I secretion membrane fusion protein [Yersinia
           pseudotuberculosis YPIII]
 gi|169752824|gb|ACA70342.1| type I secretion membrane fusion protein, HlyD family [Yersinia
           pseudotuberculosis YPIII]
          Length = 442

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 175/433 (40%), Gaps = 55/433 (12%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L +IG IG + W+ L P++  V+ +G ++  +N   I+    G I++  V  G +I+ G 
Sbjct: 33  LVVIGFIGFLLWAGLAPLDKGVAVTGLLVVAENRKVIQPLQGGRIQQLHVTEGDEIVSGQ 92

Query: 83  PLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR----- 134
            L+T +D       D +  + +S       +  E++ LD +     +LE A +       
Sbjct: 93  LLVTLDDTAIRNQRDNLQHQYLSALAQEARLTAEQNDLDVITFPQALLEHATQPAVERNI 152

Query: 135 --EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             ++QLL    + H          +S + R L  +LTR ++    RLD       L+A+ 
Sbjct: 153 ILQQQLLHHRRQAH----------LSEIAR-LSTQLTRHQA----RLD------GLQAMR 191

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHIN 245
           S+HQ+      NLF++   S   L +   I     LE       L+  + +  + +   +
Sbjct: 192 SNHQRQ----SNLFQQQLDSVQLLAKDGYIAKNKLLEMESQLTSLQARVEQGTSDIAEAH 247

Query: 246 ELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           +L DE           Y  E S  L + Q+   + + +L I E       I +P++G+++
Sbjct: 248 KLIDETEQHVLQRREQYQSENSEQLAKAQQNTQELVQRLNIAEYELSHTRIFAPVSGSVI 307

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +        Q LM+IVP  +  ++ A++  + I  V  G    + F  +      
Sbjct: 308 ALAQHTVGGVVSSGQALMEIVPSGQPLFVEAQLPVELIDKVTVGLPVDLNFSAFNQSNTP 367

Query: 362 KFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + +  + +I  D I     +         + L  T+LA       +R G   +V      
Sbjct: 368 RLQGSVWRIGADRIQPPPTSPPYYPLTVAIDLDPTELA-------IRPGMAVDVFIRTGE 420

Query: 420 TTLAQEIIHPITD 432
            +L   +  P TD
Sbjct: 421 RSLLSYLFKPFTD 433


>gi|50121706|ref|YP_050873.1| protease secretion protein [Pectobacterium atrosepticum SCRI1043]
 gi|49612232|emb|CAG75682.1| protease secretion protein [Pectobacterium atrosepticum SCRI1043]
          Length = 442

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 88/461 (19%), Positives = 190/461 (41%), Gaps = 71/461 (15%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +  +R+   +++   LL + G  G + W++  P++  V  +G ++   N   ++    
Sbjct: 11  MNQTARRDEKRAVRLGWLLVLAGFGGFLLWALFAPLDKGVMVNGSVVISGNRKVVQHNQG 70

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ K QV++G ++  G  LLT  +++                      +SA + L+ +Y
Sbjct: 71  GIVDKIQVKDGDKVEAGQILLTLNEVDA---------------------RSASEGLDGQY 109

Query: 125 DVL---EKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYR--------SLKMKLTRM 171
             L   E    + +++L D +   +      +     I+++ R        SLK++   M
Sbjct: 110 LQLVAREGRLLAEQQRLSDMVMTPRLQPLAERPEMSVITALQRDLLRSRQQSLKLEAEGM 169

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKD-------LTMMKNLFEKNAVSQNDLNQQERIVY 224
           RS       +E   S  R ++SS QK        L  +++L  +N V +N + + ER++ 
Sbjct: 170 RSSIAG---MEASLSAQRQVMSSKQKQRETLEQQLQGLRSLAAENYVPRNKMLENERLLA 226

Query: 225 KSTLEL----------RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +   ++          R +I +Q  ++    + YD          KE++ +L + Q   +
Sbjct: 227 QLNGDIAQLTGDINRTRRDIEQQTLLMAQRQQEYD----------KEVNSELAEVQALLS 276

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           D  SK    +       + +P++GT+V  + F+        Q L++IVP  +   +   +
Sbjct: 277 DVGSKKEKADFNLANIQMRAPVSGTVVGLKVFTEGGVIAPGQTLLEIVPDDQPLRVDGHL 336

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILK 392
             + +  V  G    ++F  +      +    +E +  D ++  +D     Q YY + ++
Sbjct: 337 PVELVDKVWPGLPVELQFVAFNQSTTPRVAGTVELLSADRLLDDRDG----QPYYSLRVQ 392

Query: 393 ITDLA-FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           + D    +   +E++ G P +        +    +  P+ D
Sbjct: 393 VDDEGKRALEGLEIKPGMPVQGFIRTGERSFVNYLFKPLMD 433


>gi|292901054|ref|YP_003540423.1| type I secretion system protein [Erwinia amylovora ATCC 49946]
 gi|291200902|emb|CBJ48039.1| type I secretion system protein [Erwinia amylovora ATCC 49946]
          Length = 445

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 88/427 (20%), Positives = 175/427 (40%), Gaps = 30/427 (7%)

Query: 19  RMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           RM  L++ +G+ G + W+   P++  V+S G +    N   +++P SGII    V+ G +
Sbjct: 27  RMGWLALGVGLFGFLAWAAFAPLDKGVASPGTVTVSGNSKTVQAPASGIINNIAVKEGDK 86

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREE 136
           +  G  L+    ++    +D       +LR    T  +    L  + D L +  F     
Sbjct: 87  VKAGAILVQLSQVQAQAQVD-------SLRDRYYTTLATEGRLLAERDGLNQVTFSPIFA 139

Query: 137 QLLD--FLGKYHSTCSKVF---NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           Q+ D   + +  +  +++F     G+ S     K  +  MR        L++  +  +  
Sbjct: 140 QVKDQPRVVEIIALQTQLFASRRQGLQSEIDGYKQSMDGMR---FQLKGLQDSRANKQIQ 196

Query: 192 LSSHQKDLTMMKNLFEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           LSS ++ +  MK L     + +N   D+ +Q   V  S+ E    I + +  L+   +  
Sbjct: 197 LSSLREQMNSMKQLAADGYLPRNRYLDVQRQFAEVSSSSNETAGRIGQLQKQLQESQQRI 256

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D+    FA+Y +E+   L Q Q   ++  +KL + +       I SP+ GT+V    F+ 
Sbjct: 257 DQ---RFADYQREVRTQLAQTQMDISEFRNKLQMADFDLGNTAITSPVDGTVVGLNIFTQ 313

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                    LM +VP      + + +    I  V +G    + F  +   +  K    + 
Sbjct: 314 GGVVGAGDHLMDVVPSQAALVVDSHLKVDLIDKVYQGLPVDLMFTAFNQNKTPKIPGTVT 373

Query: 369 KI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
            +  D ++    +    + YY + + ++    +  +  +++ G P EV     + +L   
Sbjct: 374 LVSADRLV----DKTSGEPYYRMQVTVSPEGMAMLSGEDIKPGMPVEVFVKTGSRSLLSY 429

Query: 426 IIHPITD 432
           +  PI D
Sbjct: 430 LFKPILD 436


>gi|292490037|ref|YP_003532931.1| type I secretion system, membrane-fusion protein [Erwinia amylovora
           CFBP1430]
 gi|4826417|emb|CAB42875.1| PrtE protein [Erwinia amylovora]
 gi|291555478|emb|CBA23972.1| Type I secretion system, membrane-fusion protein [Erwinia amylovora
           CFBP1430]
          Length = 443

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 88/427 (20%), Positives = 175/427 (40%), Gaps = 30/427 (7%)

Query: 19  RMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           RM  L++ +G+ G + W+   P++  V+S G +    N   +++P SGII    V+ G +
Sbjct: 25  RMGWLALGVGLFGFLAWAAFAPLDKGVASPGTVTVSGNSKTVQAPASGIINNIAVKEGDK 84

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREE 136
           +  G  L+    ++    +D       +LR    T  +    L  + D L +  F     
Sbjct: 85  VKAGAILVQLSQVQAQAQVD-------SLRDRYYTTLATEGRLLAERDGLNQVTFSPIFA 137

Query: 137 QLLD--FLGKYHSTCSKVF---NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           Q+ D   + +  +  +++F     G+ S     K  +  MR        L++  +  +  
Sbjct: 138 QVKDQPRVVEIIALQTQLFASRRQGLQSEIDGYKQSMDGMR---FQLKGLQDSRANKQIQ 194

Query: 192 LSSHQKDLTMMKNLFEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           LSS ++ +  MK L     + +N   D+ +Q   V  S+ E    I + +  L+   +  
Sbjct: 195 LSSLREQMNSMKQLAADGYLPRNRYLDVQRQFAEVSSSSNETAGRIGQLQKQLQESQQRI 254

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D+    FA+Y +E+   L Q Q   ++  +KL + +       I SP+ GT+V    F+ 
Sbjct: 255 DQ---RFADYQREVRTQLAQTQMDISEFRNKLQMADFDLGNTAITSPVDGTVVGLNIFTQ 311

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                    LM +VP      + + +    I  V +G    + F  +   +  K    + 
Sbjct: 312 GGVVGAGDHLMDVVPSQAALVVDSHLKVDLIDKVYQGLPVDLMFTAFNQNKTPKIPGTVT 371

Query: 369 KI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
            +  D ++    +    + YY + + ++    +  +  +++ G P EV     + +L   
Sbjct: 372 LVSADRLV----DKTSGEPYYRMQVTVSPEGMAMLSGEDIKPGMPVEVFVKTGSRSLLSY 427

Query: 426 IIHPITD 432
           +  PI D
Sbjct: 428 LFKPILD 434


>gi|330975564|gb|EGH75630.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 440

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 88/439 (20%), Positives = 183/439 (41%), Gaps = 43/439 (9%)

Query: 16  SLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            ++R+ +  ++   GL  TW+   P+  +V  SG ++ +     ++    GI+K+  V +
Sbjct: 22  GVRRIGVAIVLVTFGLFGTWAAFAPLGSAVYGSGVVMVQSYRKTVQHLEGGIVKELLVRD 81

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALD-----FLNNKYDV 126
           G  + +G PL+  +D +     +  +   +S +     +  E+  L       ++    V
Sbjct: 82  GDTVHKGDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELPSIPPLTISGTDSV 141

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS----LKMKLTRMRSIYLNRLDLE 182
             K   + E+Q+  F  + +S  +++      SV R     LK +++ +R +   ++ LE
Sbjct: 142 RAKEAIAGEQQV--FSTRKNSRLTEI------SVQRERIGQLKQQISGLRDMIRTKISLE 193

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                      S+  ++T +K+L  +  V +  L +QER +      L+  + + ++ + 
Sbjct: 194 K----------SYSSEITELKDLLSQGFVDKQRLLEQERKLDM----LKSEVADHESTIT 239

Query: 243 HINELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                  E  L+      N+  +++++L   Q    D     T L+    +  I +P  G
Sbjct: 240 KTQLQISETELQIIQLNKNFSSDVAKELSDVQAKVFDLQETATALQDRLSRVVIRAPEDG 299

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +  +         PL+ IVP S    + A V    I  +  G    VRF  +   
Sbjct: 300 MVLDMKVHTVGGVVSAGTPLLDIVPESSELVVEAHVAITDIDRISIGKLTDVRFSAFNSA 359

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
                +  + +I     + D     + YY V +K+T+       + +L+ G PAEVL  A
Sbjct: 360 TTPVIEGEVTRISADRLKDDAG---EPYYLVRVKLTEKGMKRLGDHKLQPGMPAEVLINA 416

Query: 418 KNTTLAQEIIHPITDNWPK 436
              T+ Q ++ P ++ + K
Sbjct: 417 GERTMLQYLLKPASNVFIK 435


>gi|330941718|gb|EGH44474.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 440

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 88/439 (20%), Positives = 183/439 (41%), Gaps = 43/439 (9%)

Query: 16  SLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            ++R+ +  ++   GL  TW+   P+  +V  SG ++ +     ++    GI+K+  V +
Sbjct: 22  GVRRIGVAIVLVTFGLFGTWAAFAPLGSAVYGSGVVMVQSYRKTVQHLEGGIVKELLVRD 81

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALD-----FLNNKYDV 126
           G  + +G PL+  +D +     +  +   +S +     +  E+  L       ++    V
Sbjct: 82  GDTVQKGDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELPSIPPLTISGTDSV 141

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS----LKMKLTRMRSIYLNRLDLE 182
             K   + E+Q+  F  + +S  +++      SV R     LK +++ +R +   ++ LE
Sbjct: 142 RAKEAIAGEQQV--FSTRKNSRLTEI------SVQRERIGQLKQQISGLRDMIRTKISLE 193

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                      S+  ++T +K+L  +  V +  L +QER +      L+  + + ++ + 
Sbjct: 194 K----------SYSSEITELKDLLSQGFVDKQRLLEQERKLDM----LKSEVADHESTIT 239

Query: 243 HINELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                  E  L+      N+  +++++L   Q    D     T L+    +  I +P  G
Sbjct: 240 KTQLQISETELQIIQLNKNFSSDVAKELSDVQAKVFDLQETATALQDRLSRVVIRAPEDG 299

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +  +         PL+ IVP S    + A V    I  +  G    VRF  +   
Sbjct: 300 MVLDMKVHTVGGVVSAGTPLLDIVPESSELVVEAHVAITDIDRISIGKLTDVRFSAFNSA 359

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
                +  + +I     + D     + YY V +K+T+       + +L+ G PAEVL  A
Sbjct: 360 TTPVIEGEVTRISADRLKDDAG---EPYYLVRVKLTEKGMKRLGDHKLQPGMPAEVLINA 416

Query: 418 KNTTLAQEIIHPITDNWPK 436
              T+ Q ++ P ++ + K
Sbjct: 417 GERTMLQYLLKPASNVFIK 435


>gi|212637284|ref|YP_002313809.1| HlyD family secretion protein [Shewanella piezotolerans WP3]
 gi|212558768|gb|ACJ31222.1| HlyD family secretion protein [Shewanella piezotolerans WP3]
          Length = 441

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 86/434 (19%), Positives = 183/434 (42%), Gaps = 36/434 (8%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +KR+  L    ++ ++ WS+   +E    S G+++   +   I+S   G I    VE G 
Sbjct: 29  IKRIIFLITGSVLIMLLWSLFAQVEEISKSKGQVVPLGHRQIIQSRTGGTIASVMVEEGD 88

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L +F  I++           ++    + ++++ L     +Y+      + RE 
Sbjct: 89  VVKKGDVLASFVSIDS-----------QSAEEELASKRANLVLRIERYEAF---IDQREA 134

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL----- 191
             ++F  +Y     K+    +S      +M   R+    L+  D+    + +  L     
Sbjct: 135 NFVEFELEYPQLV-KLHTASLS------RMNQERLAMQQLSESDIAKSQAEIDGLKAEIP 187

Query: 192 -----LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                + + ++ L MM+++ E+ AVS+  + + ++ +     EL+    +Q+ + +++  
Sbjct: 188 PLSDQIETAKQTLKMMRSVTEEQAVSKLRILESQQKLDSYMRELKSMESKQQVLSKNLLN 247

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +   + A  LKE+  +    Q      +++L        Q T+ +P+ G I    S 
Sbjct: 248 LEQQLKQKQATLLKEVGEERTNAQAELLGIIARLKSSGSLVSQNTVTAPVDGIIQSIPSS 307

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S+ +  Q    +  IVP +K   + AK++P+ I  VK G    ++   +   R      I
Sbjct: 308 STGSVIQPGGTVAVIVPMTKTGLMEAKLSPRDIGFVKVGQPVRIKIDAFDYSRYGALDGI 367

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQ 424
           +++I P     D++ +   +Y+V + I    F+D     +L  G   E      + T+ Q
Sbjct: 368 VKRISP---STDSDEKGGVFYKVQISIDKPYFADKPGQFDLIPGMTGEADIVTGDKTVFQ 424

Query: 425 EIIHPITDNWPKIF 438
            +  P+  N  + F
Sbjct: 425 YLWKPVFTNVTEAF 438


>gi|24375634|ref|NP_719677.1| HlyD family secretion protein [Shewanella oneidensis MR-1]
 gi|24350540|gb|AAN57121.1|AE015846_3 HlyD family secretion protein [Shewanella oneidensis MR-1]
          Length = 441

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 93/430 (21%), Positives = 177/430 (41%), Gaps = 28/430 (6%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +K++T      +  +  WS+   IE    + G+++   +   I+S   G +    V  G 
Sbjct: 29  IKQITYFIAGSVFIMFVWSLFTNIEEIAKAKGQVIPLGHQQVIQSFSGGTLASILVSEGD 88

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L  F  I++    +  +    NL   I+           +Y       ESRE 
Sbjct: 89  LVKKGDVLANFIAIDSQAAAEELESKQANLVLKIE-----------RYSAF---IESREA 134

Query: 137 QLLDFLG------KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               +L       K H +  +  N    ++ +S   ++ + ++  L  LD E     L+ 
Sbjct: 135 NFASYLESHPNLVKGHISDLERMNNEKQAIIQSSLAEIAKSKA-ELASLDQEIPP--LKH 191

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            ++S Q+ + MM+++ E  AVS+  + + ++ +     EL+    +Q+ + R I  L  +
Sbjct: 192 QITSAQQTINMMESIKESQAVSKLTMLESQQKLDSYIRELKSMEGKQQVLARDIENLQRQ 251

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              + A  LKE+       Q       ++L   +   +Q TI SP+ G I    + SS +
Sbjct: 252 LEQKQATLLKEVGEARTDAQAELLGITARLKSSDSQVQQNTITSPVDGIIQSIPNTSSGS 311

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q    +  IVP +    + AK++P+ I  V  G  A ++   +   R      I+++I
Sbjct: 312 VIQPGGTVAVIVPTTPTALLEAKLSPRDIGFVSVGQKARIKIDAFDYSRYGALDGIVKRI 371

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            P     D + +   +Y+V + I    F D  + +EL  G   E      + T+ Q +  
Sbjct: 372 SP---STDADEKGGVFYKVQISIDKPYFGDQPDKLELIPGMTGEADIVTGDKTVFQYLWK 428

Query: 429 PITDNWPKIF 438
           P+  N  + F
Sbjct: 429 PVFTNVTEAF 438


>gi|51594474|ref|YP_068665.1| HlyD family secretion protein [Yersinia pseudotuberculosis IP
           32953]
 gi|186893466|ref|YP_001870578.1| HlyD family type I secretion membrane fusion protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|51587756|emb|CAH19356.1| HlyD family secretion protein [Yersinia pseudotuberculosis IP
           32953]
 gi|186696492|gb|ACC87121.1| type I secretion membrane fusion protein, HlyD family [Yersinia
           pseudotuberculosis PB1/+]
          Length = 442

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 95/433 (21%), Positives = 175/433 (40%), Gaps = 55/433 (12%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L +IG IG + W+ L P++  V+ +G ++  +N   I+    G I++  V  G +I+ G 
Sbjct: 33  LVVIGFIGFLLWAGLAPLDKGVAVTGLLVVAENRKVIQPLQGGRIQQLHVTEGDEIVSGQ 92

Query: 83  PLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR----- 134
            L+T +D       D +  + +S       +  E++ LD +     +LE A +       
Sbjct: 93  LLVTLDDTAIRNQRDNLQHQYLSALAQEARLTAEQNDLDVITFPQALLEHATQPAVERNI 152

Query: 135 --EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             ++QLL    + H          +S + R L  +LTR ++    RLD       L+A+ 
Sbjct: 153 ILQQQLLHHRRQAH----------LSEIAR-LSTQLTRHQA----RLD------GLQAMR 191

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHIN 245
           S+HQ+      NLF++   S   L +   I     LE       L+  + +  + +   +
Sbjct: 192 SNHQRQ----SNLFQQQLDSVQLLAKDGYIAKNKLLEMESQLTSLQARVEQGTSDIAEAH 247

Query: 246 ELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           +L DE           Y  E S  L + Q+   + + +L I E       I +P++G+++
Sbjct: 248 KLIDETEQHVLQRREQYQSENSEQLAKAQQNTQELVQRLNIAEYELSHTRIFAPVSGSVI 307

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +        Q LM+IVP  +  ++ A++  + I  V  G    + F  +      
Sbjct: 308 ALAQHTVGGVVSSGQALMEIVPIGQPLFVEAQLPVELIDKVAVGLPVDLNFSAFNQSNTP 367

Query: 362 KFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + +  + +I  D I     +         + L  T+LA       +R G   +V      
Sbjct: 368 RLQGSVWRIGADRIQPPPTSPPYYPLTVAIDLDPTELA-------IRPGMAVDVFIRTGE 420

Query: 420 TTLAQEIIHPITD 432
            +L   +  P TD
Sbjct: 421 RSLLSYLFKPFTD 433


>gi|149189979|ref|ZP_01868257.1| HlyD family secretion protein [Vibrio shilonii AK1]
 gi|148836145|gb|EDL53104.1| HlyD family secretion protein [Vibrio shilonii AK1]
          Length = 431

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 102/451 (22%), Positives = 188/451 (41%), Gaps = 74/451 (16%)

Query: 22  LLSII------GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           LLS+I       +I   TWS +  ++    + G ++ E     I+S   G +K   V  G
Sbjct: 18  LLSVITYSIALCVIAFGTWSAVTQVDEIAKAKGTVVPEGERQIIQSDIGGKLKTISVAEG 77

Query: 76  SQILQGTPLLTFE-DIETTDLIDLKK------VSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             + +G  L+ F+   +TT L +LK       ++I+ L   ID  +   D   ++Y  L 
Sbjct: 78  DMVEEGQVLVEFDATFQTTALEELKAQQASLNLTIERLSSLIDEREPNFDLYQSQYPEL- 136

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              + R +                         RS ++ L   + I L + + E  +  L
Sbjct: 137 -VAQQRAQ-------------------------RSAQIALYYQKRIVLEK-EAEQIAEQL 169

Query: 189 RAL----------LSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQ 237
           R+           LS+ +++L++++   +   +S+   L  Q+++       + + I E 
Sbjct: 170 RSTEKAIPAYERQLSASKQELSILQKGQKSGNISRLRVLEMQQKVA-----SIEQQIEEA 224

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK---TIL- 293
           +     + +  D  + + +  L E   ++   +   A E+S L    ++ E K   T+L 
Sbjct: 225 RGKKALLIKQADSNDEKISQLLAEAKVEVADQRSKAASELSALEARVRSGEAKLTNTVLT 284

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP---LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           SP+ G +   QS  S+      QP   +++IVP       +A+++P+ I  V +G +A V
Sbjct: 285 SPLQGLV---QSIPSTKVGAVIQPGGTVVEIVPIGGTADFKAQLSPRDIGFVNEGQSARV 341

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQD-NNLQTQEYYEVILKITDLAFSD--NNIELRN 407
           +   Y   R    K I+E I P  S+ +  N+    +YEV +++    F D  +   L  
Sbjct: 342 KIDAYDYSRFGALKGIVESISPTTSKDEKGNI----FYEVTIEVEKPYFRDDPDRFALLP 397

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G   EV  T    T+ Q +  PI  N  + F
Sbjct: 398 GMTGEVDITTGEKTVFQYLWKPIFTNISRAF 428


>gi|157825557|ref|YP_001493277.1| alkaline protease secretion protein AprE [Rickettsia akari str.
           Hartford]
 gi|157799515|gb|ABV74769.1| Alkaline protease secretion protein AprE [Rickettsia akari str.
           Hartford]
          Length = 511

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 182/457 (39%), Gaps = 50/457 (10%)

Query: 11  RNHPASLKRMTLLSIIGIIGLIT-----WSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           RN+ A   R  +L  I +I  +      WS L P++    + G ++   N   I+    G
Sbjct: 73  RNNVAQAARSPILFGIYVIIFLVLIGGLWSALAPLDSGAVAVGIVIPSTNKKTIQHNEGG 132

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           II    V+ G ++ +G             LI+L++  IK+   H +      +FL  +  
Sbjct: 133 IINAIYVKQGDKVKEGD-----------KLIELEETRIKS--EHENVLGQYRNFLATENR 179

Query: 126 VLEKAFESREEQLLDFLGKYHST----CSKVFNYGISSVYRSLK-MKLTRMRSIYLNRLD 180
           ++ +     + +  DFL   H       +K+  +   +++RS K +  +   ++Y N   
Sbjct: 180 LIAERDHLEQIEFSDFL--MHDINLPEVAKII-HTQENLFRSRKEVYNSEKDALYQNIAQ 236

Query: 181 LENKSSLLRA-------LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           LE K   L A           +Q  L  ++ L EK  V +  L  QE  V  S    + +
Sbjct: 237 LEKKIEGLEAKKVAALKTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAAS----KSD 292

Query: 234 IHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +   +  +  I     E  ++  N    Y +    +L + Q   A    K   L  +  +
Sbjct: 293 VATTEAEIAGIRHAITETQIKIINQQNKYTERTLTELREAQVQTASLKEKYNSLTDSLNR 352

Query: 290 KTILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             I SP+ G IV N  + +        QP+M+I P +    I AKV+ K I  V +G  A
Sbjct: 353 VIIRSPVDG-IVNNLKYHTIGGVISHGQPIMEISPINDPLIIEAKVSQKNIDSVHEGLVA 411

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQ---QDNNLQTQEYYEVILKITDLAFSD----N 401
            +RF  +       F   +  I P I Q   Q    Q   YY   ++I   AF       
Sbjct: 412 KIRFSAFKSRTTPTFTGKVVSISPDIVQDERQHPGQQQDNYYVARIEIDMDAFDKVAKVK 471

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           N+EL  G  AEV       TL + ++ PITD   K F
Sbjct: 472 NLELHPGMQAEVQIVTGTRTLLRYLLDPITDTAFKAF 508


>gi|17231732|ref|NP_488280.1| RTX toxin transporter [Nostoc sp. PCC 7120]
 gi|17133375|dbj|BAB75939.1| RTX toxin transporter [Nostoc sp. PCC 7120]
          Length = 523

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 86/392 (21%), Positives = 171/392 (43%), Gaps = 56/392 (14%)

Query: 19  RMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R  +L++IG+  + I W+    IE  V ++G++  E  V E+++P +G++K+  V+NG  
Sbjct: 58  RTIMLTLIGLACVGIGWAYFAKIEQVVPATGQLKPEGTVKEVQAPVNGVVKEVFVKNGET 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE---SR 134
           + +G  LLTF+ + T   ++    S++ +R  +  E      L      +    E   SR
Sbjct: 118 VNKGDLLLTFDQVTTVAQLN----SLEKVRRALTQENQTYRRLMRSTGGIASELEFVRSR 173

Query: 135 EEQLLDFLGKYHSTC---SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             Q   FL +  +     +++    +++    + +     + + + + +L+++++     
Sbjct: 174 LPQEATFLLRSRAALVAENELLRTQLNNATTGIGLDSDEQKQLQVAKTELDSRAAAAGLE 233

Query: 192 LSSHQKDLTM---------------------MKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +S  QK LT                      +K L E+  +SQ     Q++ V  +  E+
Sbjct: 234 VSKIQKQLTQTTVKLQDTQSSLAIQQRILDKIKILAEEGGISQLQYLNQQQQVQTTAAEV 293

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEI------------------SRDLEQNQRT 272
            + + EQK +   I +   +     AN  K I                   R +  N+R 
Sbjct: 294 AQLVEEQKRLQFDIEKNQQQVTNTVANSDKNILEKIADNKKRIAEIDSQFMRIVLDNERN 353

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            AD  SK++  ++  + + + +P+AGTI   ++ ++   A  +Q L++IVP+        
Sbjct: 354 LADITSKISQAQQDLKYQELRAPVAGTIFDLKANNTGFVANPTQKLLQIVPNENF-IAEV 412

Query: 333 KVTPKQIQHVKKGYTATVR-----FPHYADIR 359
            +T K I  V+KG    VR     F  + DI+
Sbjct: 413 FITNKDIGFVRKGMKVDVRIDSFPFSQFGDIK 444


>gi|186686589|ref|YP_001869785.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186469041|gb|ACC84842.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 527

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 109/449 (24%), Positives = 197/449 (43%), Gaps = 74/449 (16%)

Query: 19  RMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R  ++++IG+    I W+    IE  V ++G++  +  + E+++P SG++K   V++G +
Sbjct: 62  RTIMVTLIGLACFGIAWAYFAKIEQVVPATGQLKPQGTIKEVQAPVSGVVKTVNVKDGQE 121

Query: 78  ILQGTPLLTFEDIET-TDLIDLKKVSI---------KNLRCHIDTEKSALDFLNNKYDVL 127
           +  G  LLTF+ I T  +L  L K+ I         + L        S L +L       
Sbjct: 122 VKSGDLLLTFDSIATVAELNSLNKIRIALIKENQIYRRLMGATTAGGSELLYLRGNLP-Q 180

Query: 128 EKAF--ESR-----EEQLL----------DFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           E AF  +SR     E  LL            LG       +V    + S   + ++++ +
Sbjct: 181 ETAFLLKSRVALVEENDLLRTQLRNSGRDSSLGIDEQQRLRVAKKELDSRSAAAQLEVEK 240

Query: 171 M-RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTL 228
           + + +  N+  LE+     +A L+  Q  L  +K L E+  +SQ   LNQQ+  V   T 
Sbjct: 241 IKKQLAQNKFKLEDS----KASLAIQQGILDKLKILSEEGGISQLQYLNQQQE-VQNRTA 295

Query: 229 ELRENIHEQKNMLRHI----NELYDEANLEFANYLKEISRDLEQ--------------NQ 270
           E+ +   E+K +   I     EL +   +   N L +I+ + ++              N+
Sbjct: 296 EVAQLGEEEKRLQFDIEKGQQELSNTVAVSDKNVLDKIADNKQRIAAIDSQFMKVILDNE 355

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           +  AD  SK++  +   + + + +P+AGT+   Q+ +    A  +  +++IVP  K  YI
Sbjct: 356 QRLADVNSKISQTQLNVKYQELRAPVAGTVFDLQAKNPGFVANPTTKMLQIVP--KENYI 413

Query: 331 -RAKVTPKQIQHVKKGYTATVR---FPH--YADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
               +T K I  V+KG    VR   FP+  + DI+ +      + + P         QT 
Sbjct: 414 AEVFITNKDIGFVRKGMKVDVRIDSFPYSEFGDIKGEVIGIGSDALPPD--------QTH 465

Query: 385 EYYEVILKIT----DLAFSDNNIELRNGF 409
           ++Y    KI+     L     N+ L++G 
Sbjct: 466 QFYRFPAKISLDKQSLVIKGKNVTLQSGM 494


>gi|270261086|ref|ZP_06189359.1| HlyD family type I secretion membrane fusion protein [Serratia
           odorifera 4Rx13]
 gi|270044570|gb|EFA17661.1| HlyD family type I secretion membrane fusion protein [Serratia
           odorifera 4Rx13]
          Length = 443

 Score = 70.1 bits (170), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 84/424 (19%), Positives = 171/424 (40%), Gaps = 24/424 (5%)

Query: 19  RMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           RM  L + IG+ G + W+   P++  V++ G +    N   +++P SGII    V+ G +
Sbjct: 25  RMGWLVVGIGLFGFLAWAAFAPLDKGVAAPGSVTVSGNRKTVQAPASGIITNIAVKEGDK 84

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREE 136
           +  G  L+    ++           + +LR    T  ++   L  + D L K  F    E
Sbjct: 85  VKAGEVLVQLSQVQAL-------AQVASLRDQYYTTLASEGRLLAERDGLTKVTFSPVFE 137

Query: 137 QLLD--FLGKYHSTCSKVFN---YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           Q+ D   + +  +  +++F+    G+ S     K  +  MR        L++     +  
Sbjct: 138 QIKDQPRVAEIIALQTQLFSSRRLGLQSEIDGYKQSMDGMR---FQLKGLQDSRVNKQIQ 194

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           LSS ++ +  MK L     + +N   + +R   +    + E +     + + + E     
Sbjct: 195 LSSLREQMNSMKQLAADGYLPRNRYLEVQRQFAEVNSSIDETVGRIGQVQKQLQESQQRI 254

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           +  FA+Y +E+   L Q Q   ++  +KL +         I S + GT+V    F+    
Sbjct: 255 DQRFADYQREVRTQLAQTQMDASEFRNKLEMANFDLGNTAITSSVDGTVVGLSIFTQGGV 314

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI- 370
                 LM +VP      + +++  + +  V  G    + F  +   +  K    +  I 
Sbjct: 315 VGAGDHLMDVVPSQATLVVDSRLKVELVDKVYNGLPVDLMFTAFNQNKTPKIPGTVTLIS 374

Query: 371 -DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            D ++ + +     + YY++ + +T       +  +++ G P EV     + +L   +  
Sbjct: 375 ADRLVDKANG----EPYYQMQVTVTPEGMKMLSGEDIKPGMPVEVFVKTGSRSLLSYLFK 430

Query: 429 PITD 432
           PI D
Sbjct: 431 PILD 434


>gi|320158136|ref|YP_004190514.1| secretion protein, HlyD family [Vibrio vulnificus MO6-24/O]
 gi|319933448|gb|ADV88311.1| secretion protein, HlyD family [Vibrio vulnificus MO6-24/O]
          Length = 442

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 79/393 (20%), Positives = 164/393 (41%), Gaps = 77/393 (19%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             MW N +  + +  +R+  L    ++ +  W+    ++  V   G+++   ++  I+S 
Sbjct: 4   QIMWSNNRIAYRS--RRLIWLCAALVLAIGVWASWATLDEVVVGDGKVVPSLSIQTIQSL 61

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIE------------TTDLIDLKKVSIKNLRCHI 110
             GIIK+  V  G Q+++G PL+  +D               T L   K++ ++     +
Sbjct: 62  EGGIIKQVLVSQGEQVVKGQPLMVLDDTRFRASYQESDQQLQTLLAQKKRLDLELQSIVV 121

Query: 111 DTEKSALD---------FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           D   +            + + + +V    F +RE         YH    +     + S  
Sbjct: 122 DGRATDWQQQVRIAKQPYPSGQDEVTRAEFNARE--------NYHQRLEQ-----LDSEL 168

Query: 162 RSLKMKLTRMRSIYLNRLD----LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
               +++ +    Y + L+    LEN  +++       QK+L M++++ +  AV++ +L 
Sbjct: 169 EESALRIEQQSQAYQDTLNSIRTLENSMAIV-------QKELNMLEDVVKTGAVAEVELL 221

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDE---------------ANLEFANYLKEI 262
           + +R      ++L+ +I   K + +     Y E               A  +    + E+
Sbjct: 222 KLKR----DYVKLQGDISSAKVLAQKQKAAYSESIADYRGIALDFRTKARGQLNEVVAEL 277

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           +R L+++Q   AD++ +            ILSP+ GT+      S     +  +P+M++V
Sbjct: 278 AR-LQESQSAIADQLRR----------TEILSPVDGTVKDVLIRSIGGVVRPGEPIMELV 326

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           P      + A++ P+ I +VK G  ATV+F  Y
Sbjct: 327 PLDSRLIVEARIAPQDIAYVKVGLEATVKFTAY 359


>gi|84387910|ref|ZP_00990924.1| HlyD family secretion protein [Vibrio splendidus 12B01]
 gi|84377256|gb|EAP94125.1| HlyD family secretion protein [Vibrio splendidus 12B01]
          Length = 437

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 96/450 (21%), Positives = 183/450 (40%), Gaps = 66/450 (14%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +N   +L   T    + +I   TWS++  ++    + G ++ E     ++S   G +K+ 
Sbjct: 19  QNTARTLALATWSVALCVIAFATWSVVTQVDEIAKAKGAVIPEGEKQVLQSAIGGKLKQI 78

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V+ G  + +G PL+ F+          ++ +++ L+    T  ++++ +N         
Sbjct: 79  FVKEGQLVEKGQPLVEFD-------ATFQRTALEELKSQQVTLLASVERMN-------AL 124

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSL-- 187
            E RE  L +F   Y    S+             K +L   +++Y   R+ LE +S    
Sbjct: 125 LEQREPNLAEFEVDYPEIVSQ------------QKAQLNAQKALYFQKRVVLEKESEQIA 172

Query: 188 --LRAL---LSSHQKDLTMMK---NLFEKNAVSQNDLNQQERIVYKSTLELREN------ 233
             LR++   L S++K+L   K   N+ EK   + N       I     LE+R+       
Sbjct: 173 EQLRSVEKALPSYEKELNATKQELNILEKGYKAGN-------ISRLRVLEMRQKLASIEQ 225

Query: 234 -IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-- 290
            I E +     +    D  + +    L E    +  ++     ++S L    ++ + K  
Sbjct: 226 KIEEARGKKSVLIRQADSNDQKIIQLLAEAKAKVSDDRSKAVSDLSALNARVRSSQAKLT 285

Query: 291 --TILSPIAGTIVYNQSFSSSNYAQQSQP---LMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              ++SP+ G +   QS  S+      QP   +++IVP       +A+++P+ I  V  G
Sbjct: 286 NTMLVSPLQGLV---QSLPSTQNGGVIQPGGTVVEIVPVGGKADFKARLSPRDIGFVSVG 342

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NI 403
               ++   +   R    K  +E I P  SQ +     + YYEV++ +    F DN  + 
Sbjct: 343 QPTRIKIDAFDYSRFGALKGAVESISPTTSQSERG---EIYYEVVVSVDVPYFRDNPESF 399

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
            +  G   EV  T    ++ Q +  PI  N
Sbjct: 400 SILPGMTGEVDITTGEKSVFQYLWKPIYTN 429


>gi|294142590|ref|YP_003558568.1| HlyD family secretion protein [Shewanella violacea DSS12]
 gi|293329059|dbj|BAJ03790.1| HlyD family secretion protein [Shewanella violacea DSS12]
          Length = 437

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 100/440 (22%), Positives = 178/440 (40%), Gaps = 74/440 (16%)

Query: 5   MWKNLKRNHPASLKR---MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           M  NL   H    KR   + L+ +  I+  I W+    +E  V    +++    V +I+S
Sbjct: 1   MGANLHIKHLEGAKRANRLILIVLALIVSTIVWAHWATLEEVVIGQAKVVPTLAVQQIES 60

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH----------ID 111
              GI+K+  V  G  +  G  LL  +++      D  ++S K LR            + 
Sbjct: 61  LDGGILKRILVREGEIVTAGQALLVLDELRFASAFDEAQLSRKALRRQRARLEAELKSVT 120

Query: 112 TEKSALDFLN------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            EK A  +L       +   V++     R E +      +HS  S+  N  +    ++++
Sbjct: 121 IEKLASHWLAKITVNPHTIQVIDGEPSQRSEAI------FHSRLSQ-LNAQLDQAEQAVE 173

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
            K+  +     NR+    + S L+ +    +K++ M +   ++ AV++ +L + ER    
Sbjct: 174 QKIQALEE---NRIITRAQISGLKLV----RKEIAMTREAVDEGAVAELELLKLER---- 222

Query: 226 STLELRENIHEQKNMLRHINELYDEA-------NLEFAN--------YLKEISRDLEQNQ 270
             + L   +   K M R +  +  +A        L+F N         + E++  L+++ 
Sbjct: 223 DEIRLEGELLASKAMARQLKAVKSQAIGERLTLALDFRNRTEAERNEVINELA-GLQESI 281

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           +T AD       L++TR    I SPI G +      S     +  +P+M IVP      I
Sbjct: 282 KTLADR------LDRTR----ISSPIDGKVTNILLRSLGAVVEPGEPIMAIVPSDGALII 331

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
             ++ PK I  V  G  ATV+F  Y  +     K  +  + P   Q ++      YYE  
Sbjct: 332 ETRIAPKDIAFVHPGLEATVKFTAYDFVIYGGLKGEVIYVSPDAQQLEDG---TTYYEAH 388

Query: 391 LKITDLAFSDNNIELRNGFP 410
           +K         N  + NG+P
Sbjct: 389 VK--------TNENMLNGWP 400


>gi|23015806|ref|ZP_00055573.1| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 577

 Score = 70.1 bits (170), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 90/412 (21%), Positives = 173/412 (41%), Gaps = 61/412 (14%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W+ L R          ++S+ GI   I W+ +  ++    + GE++ E  V  I+    G
Sbjct: 162 WRPLAR---------VVMSLTGI--FIVWAFVSHLDEVAIAEGEVVPEGKVKVIQHLEGG 210

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI--KNLRCHIDT---EKSALDF- 119
           ++++  V +GS++ +G PL+         L+DL   S+  + L+  +D    +++ L+  
Sbjct: 211 VVREIMVTDGSEVKEGAPLI---------LLDLPVSSLNKEELQARMDGYMLQRARLEAE 261

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           LN+K     +    R+  L++   +      +  N  ++ +   ++ K        L   
Sbjct: 262 LNDKPVAFPEEEAKRQPALVESERRSFEARRQALNATLTVLRDQVRQK-------GLEVQ 314

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           + E KS  +   L   Q+ L M  +L +    S+ D            ++++  + + K 
Sbjct: 315 EYETKSRSITTSLRLSQERLVMSTDLIKAGLASKMD-----------HVQIQSQVEDLKG 363

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTRE---QKT---- 291
            L  +      A          ++ ++ + QRT   EMS+  + + +TRE   Q T    
Sbjct: 364 QLESVRASIPRAEAAQQEAKGRVAEEMARFQRTAQSEMSEAELNIARTRELFIQATDQQR 423

Query: 292 ---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              I SPI G +   +S +     +   P+M+IVP  +   + AK+ P    +V++G  A
Sbjct: 424 RTLIASPIDGIVKNMRSNTIGGVVRPGDPIMEIVPLHERLQVDAKLNPMDRGYVQEGQRA 483

Query: 349 TVRFPHYADIREKKFKA--IIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           TV+   Y            I+   D  + Q  N    Q YY V+++ TD A+
Sbjct: 484 TVKISAYDYTTYGGLDGDVILVAPDTTVPQTPN---AQPYYRVVVQ-TDRAY 531


>gi|290473563|ref|YP_003466433.1| alkaline protease secretion protein AprE [Xenorhabdus bovienii
           SS-2004]
 gi|289172866|emb|CBJ79637.1| Alkaline protease secretion protein aprE [Xenorhabdus bovienii
           SS-2004]
          Length = 445

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 83/430 (19%), Positives = 178/430 (41%), Gaps = 36/430 (8%)

Query: 19  RMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+  L I IG++G   W+   P++  V+SSG ++ + N   ++SP +GII++     G Q
Sbjct: 27  RLGWLVIGIGLLGFFVWAAFAPLDKGVASSGIVVVDGNRKTVQSPANGIIRQILASEGEQ 86

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +  G  L+    ++    ID  K  +         +  E+  L+ ++    + ++  E R
Sbjct: 87  VKAGQVLVQLSQVQVNAQIDSLKQQLHTTLATEARLLAEQQGLEVISFPATLWDQQSEPR 146

Query: 135 EEQLLD-----FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            + +L      FL +     S +   G+      L  +L  +R+   N+   + + SL  
Sbjct: 147 IKDILVLQKQLFLSRREMLRSDL--AGMQQAEEGLSFQLKGLRNALTNK--QQQQVSL-- 200

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                 ++ +T ++ L E+    +N   + +R    S  EL  ++ E    +  + +   
Sbjct: 201 ------KEQVTNLRPLTEEGYFPRNRYLELQR----SQSELSGSMAEMAGRIGQLEKQCQ 250

Query: 250 EANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E         A+Y +E+   L   Q    +  +KL   +      +I +P++G+++    
Sbjct: 251 ETRQRIIQRQADYQREVRSQLSDVQVQANELKNKLETTQFDLSHTSITAPVSGSVMGLTV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF-- 363
           F+        + LM+I+P      + A++    I  V  G    + F  +   +  K   
Sbjct: 311 FTQGGVVASGEKLMEILPAQSALEVEARLMVHLIDKVAMGQDVDLMFTAFNQNQTPKVTG 370

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
           K  +   D ++    + +  + YY++ +++T    +    + ++ G P EV     + +L
Sbjct: 371 KVTVISADRLV----DGVTREPYYQMRVRVTPEGMAQLAGLHIKPGMPVEVFVKTGSRSL 426

Query: 423 AQEIIHPITD 432
              +  P+ D
Sbjct: 427 LSYLFKPLMD 436


>gi|325276912|ref|ZP_08142601.1| HlyD family secretion protein [Pseudomonas sp. TJI-51]
 gi|324097959|gb|EGB96116.1| HlyD family secretion protein [Pseudomonas sp. TJI-51]
          Length = 441

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 92/421 (21%), Positives = 179/421 (42%), Gaps = 45/421 (10%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           GI G  TW+   P+  SV  +G +  ++    ++    GI+K+    +G  + +G PL+ 
Sbjct: 36  GIFG--TWAAFAPLSNSVHGTGVVTVQNYRKTVQHLEGGIVKELHARDGDLVNKGDPLIV 93

Query: 87  FEDIE-------TTDLIDLKKVSIKNLRCHIDTEKS--ALDFLNNKYDVLEKAFESREEQ 137
            ++ +       T + + + +     LR   D   S  A+       D  ++A    E+Q
Sbjct: 94  LDESQLSAEYESTRNQLIVARYKEARLRAERDGLASIPAVTMEGTDSDRAQEALAG-EQQ 152

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +  F  ++ S   ++      SV R  +++  + +   LN + +  K+ L +    S+  
Sbjct: 153 V--FKARHDSLQGEI------SVNRE-RIQQMQQQIAGLNDM-IRTKTGLEK----SYSG 198

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++  +K L  +  V    L +QER +      L+  + + ++ +        E  L+   
Sbjct: 199 EIKQLKELLAEGFVDNQRLLEQERKLDM----LKTEVADHQSSITKTKLQIGETELQIVQ 254

Query: 258 YLK----EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             K    +++++L   Q    D   K   L     +  I +P +G ++  +  +      
Sbjct: 255 LKKKFDADVAKELSDVQAQVFDLQEKEAALRDRLSRVVIRAPESGMVLDMKVHTIGGVVS 314

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY----ADIREKKFKAIIEK 369
            + PL+ IVP      + AKV P+ I  ++ G TA VRF  +      I E K   I   
Sbjct: 315 AATPLLDIVPAQSELVVEAKVAPRDIDRLELGKTADVRFSAFNQATTPIIEGKLTRI--S 372

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            D ++ ++  +    +YY V +K+T+         +L+ G PAEVL  A + T+ Q ++ 
Sbjct: 373 ADSLVDERSGD----QYYLVRVKVTEDGMKKLAGRKLQPGMPAEVLINAGDRTMLQYLLK 428

Query: 429 P 429
           P
Sbjct: 429 P 429


>gi|118591593|ref|ZP_01548990.1| putative transport protein [Stappia aggregata IAM 12614]
 gi|118435921|gb|EAV42565.1| putative transport protein [Stappia aggregata IAM 12614]
          Length = 446

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 102/457 (22%), Positives = 178/457 (38%), Gaps = 83/457 (18%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL ++ I G   WS   P+  +V SSG  +      +++    GI+K+  V+ G ++ QG
Sbjct: 30  LLLVVFIGGFAAWSFTAPLAAAVISSGTFVATGQNKQVQHYEGGIVKEILVQEGERVQQG 89

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRC---------------HIDTEKSALDFLNNKYDV 126
            P++  +  ET    + +++ +K  R                 ++  K+ LD  NNK   
Sbjct: 90  DPIVLLD--ETVASANERQLGLKLARLEAINARLRAEYLWLDEVEFPKTLLDQKNNKEIA 147

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
              A      Q L FLG      S +    + S   SL+ +    R         E   S
Sbjct: 148 TIIA-----GQKLSFLGSRTKLMSDIRI--LESTIESLQHRHDGYR---------EQHDS 191

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           +++  LS  +++    K+LFEK  + +  LN  ER            I E +  +  +  
Sbjct: 192 MIKQ-LSILKEEHKGKKHLFEKGLLLKPTLNALER-----------AIAEAEGQIGRLAS 239

Query: 247 LYDEANLEFANYLKEISRDLEQ-NQRTFADEMSKLTILEKTREQ----------KTILSP 295
              EAN +   + +++ +     N++   D  S    L+  REQ            I +P
Sbjct: 240 AMQEANAQVLQHQEQVKQTRAAYNEKVLDDLQSIEAELDAAREQSRKARNVLERAVIQAP 299

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           ++GTIV     ++    +  + +++I+P      I A ++   I  V  G  AT+R    
Sbjct: 300 VSGTIVRMHYHTAGGVIESGKTIVEILPSDAPLIIEALISRTDIDSVHIGQQATIR---- 355

Query: 356 ADIREKKFKAIIEKIDPIISQQ----------DNNLQTQEYYEVILKITDLAFSD----N 401
                    A+ ++  P++  Q          DN   T    EV +   D+A  +     
Sbjct: 356 -------LSALNQRTTPVLQGQVQYVSADAITDNT--TGMMREVYVTRIDIAPGELTRVL 406

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           N     G PAE++      T  Q +  PI D+  + F
Sbjct: 407 NFVPTPGMPAEIMIQTAERTFMQYLTKPIVDSMSRAF 443


>gi|1208448|dbj|BAA12016.1| metalloprotease transporter [Serratia marcescens]
          Length = 443

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/421 (19%), Positives = 170/421 (40%), Gaps = 27/421 (6%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L ++G  G + W +L P++  V  SG ++   N   ++ P  G++ + QV  G ++  G 
Sbjct: 30  LVLLGFGGFLLWGLLAPLDKGVPVSGSVVVAGNRKAVQHPSGGVVSQIQVHEGDRVRAGQ 89

Query: 83  PLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ-- 137
            LL  + +++    D +  +++S    +  +  E+  L  +     V     ++R E+  
Sbjct: 90  VLLLMDTVDSRTQRDALRSQQLSNAAQQARLQAERDGLHAI-----VFPALLQARREEPE 144

Query: 138 ---LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
              L+    +  ++        ++++  S+      +  I  +    + + ++L      
Sbjct: 145 VMSLMLLQQQLFTSRRAALQSELAAIAESIAGSQAMLEGIRQSYASKQRQKAML------ 198

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q+ L  M+ L  +  V++N L   E    +   +  E+      + R I EL   A   
Sbjct: 199 -QEQLGGMRKLAAQGYVARNRLLDLEGQYAQIDGQASEDTGNIGRLGRQILELKLRAIQR 257

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              Y KE+S  L + +    +  ++L   E       + + +AGT+V    F+       
Sbjct: 258 REEYQKEVSSQLAEVRMKLDELDNRLAKAEADLGHTQVKASVAGTVVGLSVFTEGGVIGA 317

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DP 372
            Q LM+IVP  +   + A++  + I  V+ G    + F  +      + +  +  +  D 
Sbjct: 318 GQQLMEIVPSDRGLQVEARIPVELIDKVQVGLPVELLFSAFNPSTTPRVEGEVTLVGADR 377

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           +  ++        YY V  K+++      N +E+R G P E        ++   +  P+T
Sbjct: 378 LTDEKSGA----PYYSVRAKVSEAGLQRLNGLEIRPGMPVEGFIRTGERSMMNYLFKPLT 433

Query: 432 D 432
           D
Sbjct: 434 D 434


>gi|227327221|ref|ZP_03831245.1| HlyD family secretion protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 452

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 89/432 (20%), Positives = 170/432 (39%), Gaps = 39/432 (9%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           LK    L + G  GL+ W+ + P++  V+ SG ++  DN   ++   SG I    V +G 
Sbjct: 35  LKYGLWLVLAGFGGLLLWAGMAPLDKGVAVSGRVVVADNRKTVQPVSSGRIASLTVRDGD 94

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESRE 135
            +  G  L T +        D       NL   + +        L  + D+   AF +  
Sbjct: 95  HVQAGQILATLDQTPAQAQRD-------NLVTQLQEAHAGEARLLAERDDLSTIAFPAPT 147

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSS 194
           EQ        HST ++        ++ S +  L + R+ +    +  + +S   +ALL+S
Sbjct: 148 EQ--------HSTVTQQIQIAQQQLFISRRAALQQERAAMQAAIIGAKAQSQGSQALLAS 199

Query: 195 HQ-------KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            Q       + L  ++ L ++  +++N L   ER       +L   + +++N    + + 
Sbjct: 200 SQTQFQIISEQLRGLRPLAQEGYIARNRLLDVER----QAAQLAGAMAQERNNQVQLQQQ 255

Query: 248 YDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E   +       Y KE+   L   QR+  D   +L   E   +   I +P +GT+V  
Sbjct: 256 VVELEQKIQQRQNEYQKEVRAQLADTQRSMQDLTQRLKTAEYELQHTHIRAPASGTVVGL 315

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +        Q LM+IVP  +   I A++  + +  V  G    + F  +      + 
Sbjct: 316 ALHTEGGVVNSGQMLMEIVPDGQPLLIDAQLPIELVDRVSNGLPVELLFSAFNQSTTPRI 375

Query: 364 KAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
             ++  I  D ++ QQ      + YY + + + +        +++R G P E        
Sbjct: 376 SGVVALIGADQLVEQQTG----KPYYALRIHVDEQGKQQLAGLDVRPGMPVEAFIRTGER 431

Query: 421 TLAQEIIHPITD 432
           +L   +  P++D
Sbjct: 432 SLLNYLFKPLSD 443


>gi|163734059|ref|ZP_02141500.1| type I secretion membrane fusion protein, HlyD family, putative
           [Roseobacter litoralis Och 149]
 gi|161392595|gb|EDQ16923.1| type I secretion membrane fusion protein, HlyD family, putative
           [Roseobacter litoralis Och 149]
          Length = 437

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 96/454 (21%), Positives = 182/454 (40%), Gaps = 51/454 (11%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           WK      P  +    LL ++G+IG+  WS+   I  +V +SG I  E N   ++ P  G
Sbjct: 11  WKA---TGPLMVGITALLILVGVIGV--WSVQARIAGAVIASGNIEVESNRQVLQHPQGG 65

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           ++    V++G  +  G  +L F+D +      +++ +   I   +  +  E+  LD L  
Sbjct: 66  VVGALPVKDGDFVNAGDTVLRFDDTQLRSELAIVEGQLFEILARKARLKAERDGLDALPL 125

Query: 123 KYDVLEKAFESREEQ-LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
             ++ E A E    Q L+D   +     +         +   +     ++         L
Sbjct: 126 TEELAELAAEDDAVQALIDGQAQLFEARATSLQQSSEQILEQIAQAENQIEGATAQLAAL 185

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN----QQERI------VYKSTLELR 231
           E +  L+ A       +LT  + LFEK     + ++    +Q R+      V  S  +LR
Sbjct: 186 ETQRGLIEA-------ELTDSQTLFEKGLAPASRVSSLQREQARLLGEIGSVTSSIAQLR 238

Query: 232 ENIHEQK-NMLRHINELYDEA-----NLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             I       +   + L +EA     +L+F    +E+  +L Q + +  D +S++ +   
Sbjct: 239 GEIASLSIERISLTSRLREEAISTLRDLQF----QEV--ELVQRRLSTTDTLSRMELR-- 290

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                   +P++G I  ++ F+  +    ++P+M I+P  +   + A+V P  I  V  G
Sbjct: 291 --------APVSGVIYGSRIFALRSVVSPAEPIMYIIPQDQPMVVAARVDPIHIDQVHVG 342

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL-AFSDNNIE 404
             AT+RF  +      +    + ++   +    + +    YYEV L   D  A       
Sbjct: 343 QEATLRFAAFDQRMTPEIIGHVVRMSADVF--TDEVTGMSYYEVKLVPMDGEAEKLGGQV 400

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           L  G P E        +    +  P+TD + + F
Sbjct: 401 LLPGMPVEAFIKTAERSPLNYLAKPLTDYFTRAF 434


>gi|251789710|ref|YP_003004431.1| type I secretion membrane fusion protein, HlyD family [Dickeya zeae
           Ech1591]
 gi|247538331|gb|ACT06952.1| type I secretion membrane fusion protein, HlyD family [Dickeya zeae
           Ech1591]
          Length = 448

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/444 (18%), Positives = 181/444 (40%), Gaps = 37/444 (8%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M     R+   +L+    L   G  G + W++L P++  V+  G ++   N   I+    
Sbjct: 17  MRDRASRDEERALRLGWWLVFAGFGGFLLWALLAPLDKGVAVQGNVVVSGNRKVIQHMQG 76

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT----EKSALDFL 120
           GI+++ QV+ G ++  G  LLT   ++        + + + L    D     E   L   
Sbjct: 77  GIVERIQVKEGDRVSAGQVLLTLNAVDA-------RTTSEGLGSQYDQLIAREARLLAEQ 129

Query: 121 NNKYDVLE--KAFESREE-------QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            N+  ++   +  E+R+         L + L +      K+   G+ +    L+M L  +
Sbjct: 130 RNQTSLVATPRLVEARQRPEVATIVALQEDLLRSRQQALKLETDGVRASIEGLEMSLVAL 189

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           + +      + +K S  +A+LS     L  ++ L   N V +N + + ER+  + + EL 
Sbjct: 190 QKV------MTSKQSE-QAVLSQQ---LQGLRPLAADNYVPRNKMLETERLFAQVSGELA 239

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +   E     R I +           Y KE+  +L   Q    + +S+    +       
Sbjct: 240 QTSGEVGRTRRDIQQQKLRIAQRQQEYDKEVGSELSDVQAKLNEVISQREKADFNLANVQ 299

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P+AGT+V  + F+        Q +M+IVP  +   +  ++  + +  V+ G    ++
Sbjct: 300 VRAPVAGTVVDLKVFTEGGVIGAGQVMMEIVPEDQPLLVDGRIPVEMVDKVRSGLPVELQ 359

Query: 352 FPHYADIREKKFKAIIE--KIDPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNG 408
           F  ++     +    +     D ++ ++D +     YY + +++++    S + +E++ G
Sbjct: 360 FTAFSQSTTPRVPGTVTLLSADRLVDEKDGS----PYYSLRIQVSEEGKRSLHGLEIKPG 415

Query: 409 FPAEVLFTAKNTTLAQEIIHPITD 432
            P +        +    +  P+ D
Sbjct: 416 MPVQGFVRTGERSFINYLFKPLMD 439


>gi|163747673|ref|ZP_02155018.1| Type I secretion membrane fusion protein, HlyD [Oceanibulbus
           indolifex HEL-45]
 gi|161379042|gb|EDQ03466.1| Type I secretion membrane fusion protein, HlyD [Oceanibulbus
           indolifex HEL-45]
          Length = 442

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 90/427 (21%), Positives = 178/427 (41%), Gaps = 49/427 (11%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           GI+G  TW+    I  +V + G +  E +   ++    GI++   V   + + QG PLL 
Sbjct: 35  GILG--TWAYFAIIASAVVAPGVVSLESDRKVVQHLEGGIVQDILVREAAFVEQGDPLLV 92

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            ++I+    I +           ++  ++A + L  +  V E+AF+   E   D L    
Sbjct: 93  LDNIQINSEIRV-----------LEQRRAASEALIARL-VAEQAFDEEIEFSPDLLNAED 140

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--------LENKSSLLRALLSSHQKD 198
                     + S  ++ +      RSI+L++ +        L +++      L++ ++ 
Sbjct: 141 PY--------VKSAVQAQRNIFEDRRSIFLSQTEILEFRAEQLNSQAEGYEVQLAAVERR 192

Query: 199 LTMMKNLFEK-------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            T+   LFE+         +  N L++ +       +++  +I    + +  +     EA
Sbjct: 193 HTLRNELFERMRTGEERGVIESNRLSEMQ----DEVIQIEASIGTAMSDIAQVKAAAGEA 248

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMS----KLTILEKTREQKTILSPIAGTIVYNQSFS 307
            L      +E S       +T   E+S    KLT+      + TIL+P  G +      +
Sbjct: 249 QLNILKLKQEYSERANSELKTARSELSEINEKLTVAADQMRRTTILAPTTGKVQSLAVTT 308

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFKAI 366
             +  +  + LM+IVP  +   I AK+ P  + +V+ G    VRF  + A + +     +
Sbjct: 309 RGSVIRSGEILMEIVPSDETLLIDAKIAPVDVDNVRPGLETEVRFSAFKARLSKVVLGEV 368

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQE 425
           +     +++ QD N     YY   +K+ D   +D   E L  G PA+V+      T+ Q 
Sbjct: 369 LSISTDVVTTQDPN--EAPYYLARIKVPDENLTDEIREGLTAGMPADVVILTGERTVLQY 426

Query: 426 IIHPITD 432
           ++ P+++
Sbjct: 427 MLDPLSE 433


>gi|289678426|ref|ZP_06499316.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae FF5]
          Length = 440

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/439 (20%), Positives = 183/439 (41%), Gaps = 43/439 (9%)

Query: 16  SLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            ++R+ +  ++   GL  TW+ L P+  +V  SG ++ +     ++    GI+K+  V +
Sbjct: 22  GIRRIGVAIVLVTFGLFGTWAALAPLGNAVYGSGVVMVQSYRKTVQHLEGGIVKELLVRD 81

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALD-----FLNNKYDV 126
           G  + +G PL+  +D +     +  +   +S +     +  E+  L       ++    V
Sbjct: 82  GDTVHKGDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELPSIPPLTISGTDSV 141

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR----SLKMKLTRMRSIYLNRLDLE 182
             K   + E+Q+  F  + +S  +++      SV R     LK +++ +R +   ++ LE
Sbjct: 142 RAKEAIAGEQQV--FSTRKNSRLTEI------SVQRERIGQLKQQISGLRDMIRTKISLE 193

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                      S+  ++T +K+L  +  V +  L +QER +      L+  + + ++ + 
Sbjct: 194 K----------SYSSEITELKDLLSQGFVDKQRLLEQERKLDM----LKSEVADHESTIT 239

Query: 243 HINELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                  E  L+      N+  +++++L   Q    D     T L+    +  I +P  G
Sbjct: 240 KTQLQISETELQIIQLNKNFSSDVAKELSDVQAKVFDLQETATALQDRLSRVVIRAPEDG 299

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +  +         PL+ IVP S    + A V    I  +  G    V F  +   
Sbjct: 300 MVLDMKVHTVGGVVSAGTPLLDIVPESSELVVEAHVAINDIDRISIGKLTDVHFSAFNSA 359

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
                +  + +I     + D     + YY V +K+T+       + +L+ G PAEVL  A
Sbjct: 360 TTPVIEGEVTRISADRLKDDAG---EPYYLVRVKLTEKGMKRLGDRKLQPGMPAEVLINA 416

Query: 418 KNTTLAQEIIHPITDNWPK 436
              T+ Q ++ P ++ + K
Sbjct: 417 GERTMLQYLLKPASNVFIK 435


>gi|293396942|ref|ZP_06641216.1| HlyD family type I secretion membrane fusion protein [Serratia
           odorifera DSM 4582]
 gi|291420413|gb|EFE93668.1| HlyD family type I secretion membrane fusion protein [Serratia
           odorifera DSM 4582]
          Length = 443

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 87/422 (20%), Positives = 171/422 (40%), Gaps = 20/422 (4%)

Query: 19  RMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           RM  L + +G+ G   W+   P++  V+S G ++   N   +++P SGIIK   V+ G +
Sbjct: 25  RMGWLVVGVGLFGFFAWAAFAPLDKGVASPGSVIVSGNRKTVQAPASGIIKNIAVKEGDK 84

Query: 78  ILQGTPLLTFEDIETTDLID-LKKVSIKNL--RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +  G  L+    ++    +D L+      L     +  E+  LD +     +L+   + R
Sbjct: 85  VKAGEVLVQLSQVQAQAQVDSLRDQYYTTLATEGRLLAERDGLDKVTFSPVLLQLQTQPR 144

Query: 135 EEQLLDFLGK-YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             +++    + +HS        G+ S     K  +  MR        L++        L+
Sbjct: 145 VAEIIALQNQLFHSR-----RLGLQSEIDGYKQSMDGMR---FQLKGLQDSKVNKNIQLA 196

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           S ++ +  MK L     + +N   + +R   +    + E +     + + + E   + + 
Sbjct: 197 SLREQMNSMKQLAADGYLPRNRYLEVQRQFAEVNGSIDETLGRIGQLQKQLQESQQKVDQ 256

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
            FA+Y +E+   L Q Q   ++  +KL +         I SP+ GT+V    F+      
Sbjct: 257 RFADYQREVRTQLAQTQMDASEFRNKLEMANFDLGNTAITSPVDGTVVGLTIFTQGGVVG 316

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--D 371
               LM +VP      + A++    I  V  G    + F  +   +  K +  +  I  D
Sbjct: 317 AGDHLMDVVPSQANLVVDARLKVDMIDKVYHGLPVDLMFTAFNQNKTPKIEGSVTLISAD 376

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNI-ELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            ++ + +     + YY++ + +T       N  E++ G P EV     + +L   +  PI
Sbjct: 377 RLVDKANG----EPYYQMQVTVTPEGMKKLNAEEIKPGMPVEVFVKTGSRSLLSYLFKPI 432

Query: 431 TD 432
            D
Sbjct: 433 LD 434


>gi|86136062|ref|ZP_01054641.1| putative type I secretion protein [Roseobacter sp. MED193]
 gi|85826936|gb|EAQ47132.1| putative type I secretion protein [Roseobacter sp. MED193]
          Length = 390

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/416 (19%), Positives = 170/416 (40%), Gaps = 57/416 (13%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           R+  L    ++  I W+    ++  V   GE+++      +++   GI+ +  V  G ++
Sbjct: 18  RIVYLVGAALLLFIGWAAFASVDEIVRGEGEVVSSSRAQIVQNLEGGILAELYVRQGDEV 77

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE-KAFESREEQ 137
             G  L   +D +                      ++  D L ++ D LE K F  R E 
Sbjct: 78  RAGQVLAKLQDTKF---------------------RTIADELQDQIDTLEIKQF--RLEA 114

Query: 138 LLDFLGKYH-STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +D  G Y  S  + + N       RS ++  +    +   + D +++ +  R +L    
Sbjct: 115 EMD--GAYEFSVPNDLAN-------RSAEILASERALLNARQGDFDSRRTSARKILDQLN 165

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +L  M+ L+E+N V+  ++N+ ++    +  +  E I  Q  +   + E Y EA  E A
Sbjct: 166 DELANMRKLYEQNIVALIEVNRSQKAATDAQAKFNE-IGTQNEL--KLAEEYSEALRELA 222

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           +        L Q+QR   D++ +            I SP++G +      +     +  +
Sbjct: 223 S--------LRQDQRLAQDQLDR----------TVITSPMSGIVNSLGVTTIGGVVRPGE 264

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            + +I+P  +  ++ A+V PK I  V+ G  AT++   Y           ++ +     +
Sbjct: 265 EIFEIIPMGEELFVEARVNPKDIASVQTGQPATIKLSAYDYTIYGALNGEVDFVSADTFE 324

Query: 377 QDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            + N + + YY V +++  +DL      IE+R G  A       + T+   ++ P+
Sbjct: 325 DERNPRAEPYYRVTVRVDRSDLTERQLGIEIRPGMRATAELQTGSKTVLNYLLKPL 380


>gi|157964390|ref|YP_001499214.1| HlyD family secretion protein [Rickettsia massiliae MTU5]
 gi|157844166|gb|ABV84667.1| HlyD family secretion protein [Rickettsia massiliae MTU5]
          Length = 512

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 104/451 (23%), Positives = 177/451 (39%), Gaps = 38/451 (8%)

Query: 11  RNHPASLKRMTLLSIIGIIGLIT-----WSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           RN+ A   R  +L  I +I  +      WS L P++    + G ++   N   I+    G
Sbjct: 74  RNNVAQAARSPILFGIYVIIFLVLIGGLWSALAPLDSGAVAVGIVMPSTNKKTIQHHEGG 133

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           II    V+ G ++ +G  L+   ++E T +    +  +   R  + TE   +   +N   
Sbjct: 134 IINAIYVKQGDKVKEGDKLI---ELEETRIKSEHENILGQYRNFLATENRLIAERDNLAQ 190

Query: 126 VLEKAFESREEQLLDFLGKYH------STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    F  ++  L +     H      S+  +V+N    ++Y+++     ++        
Sbjct: 191 IEFSDFLMQDINLPEVAKIIHTQENLFSSRKEVYNSEKDALYQNIAQLEKKIEG------ 244

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            LE K          +Q  L  ++ L EK  V +  L  QE  V  +    + ++   + 
Sbjct: 245 -LEAKKVAASKTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAAA----KSDVATTEA 299

Query: 240 MLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            +  I     E  ++  N    Y +    +L + Q   A    K   L  +  +  I SP
Sbjct: 300 EIAGIRHAITETQIKIINQQNKYTERTLTELREAQVQTASLKEKYNALTDSLNRVIIRSP 359

Query: 296 IAGTIVYNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           + G IV N  + +        QP+M+I P +    I AKV+ K I  V +G  A +RF  
Sbjct: 360 VDG-IVNNLKYHTIGGVISHGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSA 418

Query: 355 YADIREKKFKAIIEKIDPIISQ---QDNNLQTQEYYEVILKITDLAFSD----NNIELRN 407
           +       F   +  I P I Q   Q    Q   YY   ++I    F+      N+EL  
Sbjct: 419 FKSRTTPTFTGKVVSISPDIVQDERQHPGQQQDNYYVARVEIDMDEFNKVAKVKNLELHP 478

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G  AEV       TL + ++ P+TD   K F
Sbjct: 479 GMQAEVQIVTGTRTLLRYLLDPVTDTAFKAF 509


>gi|121593011|ref|YP_984907.1| HlyD family type I secretion membrane fusion protein [Acidovorax
           sp. JS42]
 gi|120605091|gb|ABM40831.1| type I secretion membrane fusion protein, HlyD family [Acidovorax
           sp. JS42]
          Length = 455

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/408 (20%), Positives = 178/408 (43%), Gaps = 25/408 (6%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-IET 92
           W+ L P++  V   G +  +     ++    GI+++  V  G ++ +G  L+  +  +  
Sbjct: 53  WAALAPLDEGVPGPGVVALDTKRKAVQHLSGGIVQQVLVREGDEVKEGQLLIKLDAAVAR 112

Query: 93  TDLIDLKK--VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTC 149
            +   +++  + +  ++  +  E+     +    D+ E A +   ++Q+L+    +H+  
Sbjct: 113 ANYESVRQSYLGLLAMQARLQAEQLGKPGIAWPADLKEAASDPLIQQQILNQEQLFHTRR 172

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S +    + S+  +++ +   ++S      + +N+ +LL        ++L  +++L ++ 
Sbjct: 173 S-LLRSDLQSIEENIQGQEGLLQSYAGMLGNRKNQLALL-------HEELGHLRDLVKEG 224

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHE-QKNMLRH---INELYDEANLEFANYLKEISRD 265
              +N   + ER    S  ++  +I + Q N LR    I++L   A      Y KE+   
Sbjct: 225 YAPRNRQLELER----SVADVNTSIADLQGNTLRARSAISDLRQRAISRQQEYRKEVETQ 280

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L    R    +  K   +    E+  I SP  G +V     +     Q  Q LM IVP  
Sbjct: 281 LADVSRQVLVDGEKFRAVRNDLERTEIRSPADGQVVGLAVQTVGGVVQPGQKLMDIVPKG 340

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQ 384
               + A+V P  I  VK G    VRF  +A+  +   +  +E +   ++++  +N+   
Sbjct: 341 APLLLEARVAPHMIDRVKAGMPVDVRFSSFANSPQLVVQGAVESVSGDLLTEPQSNV--- 397

Query: 385 EYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            YY   +++T + A +    +L  G P EV+F     ++   ++HP+T
Sbjct: 398 SYYLARVQVTGEGAKALGQRQLHPGMPVEVIFKGGERSMLTYLLHPLT 445


>gi|330899769|gb|EGH31188.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 440

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/439 (20%), Positives = 182/439 (41%), Gaps = 43/439 (9%)

Query: 16  SLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            ++R+ +  ++   GL  TW+ L P+  +V  SG ++ +     ++    GI+K+  V +
Sbjct: 22  GVRRIGVAIVLVTFGLFGTWAALAPLGNAVYGSGVVMVQSYRKTVQHLEGGIVKELLVRD 81

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALD-----FLNNKYDV 126
           G  + +G PL+  +D +     +  +   +S +     +  E+  L       ++    V
Sbjct: 82  GDTVQKGDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELPSIPPLTISGTDSV 141

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR----SLKMKLTRMRSIYLNRLDLE 182
             K   + E+Q+  F  + +S  +++      SV R     LK +++ +R +   ++ LE
Sbjct: 142 RAKEAIAGEQQV--FSTRKNSRLTEI------SVQRERIGQLKQQISGLRDMIRTKISLE 193

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                      S+  ++T +K+L     V +  L +QER +      L+  + + ++ + 
Sbjct: 194 K----------SYSSEITELKDLLSHGFVDKQRLLEQERKLDM----LKSEVADHESTIT 239

Query: 243 HINELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                  E  L+      N+  +++++L   Q    D     T L+    +  I +P  G
Sbjct: 240 KTQLQISETELQIIQLNKNFSSDVAKELSDVQAKVFDLQETATALQDRLSRVVIRAPEDG 299

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +  +         PL+ IVP S    + A V    I  +  G    V F  +   
Sbjct: 300 MVLDMKVHTVGGVVSAGTPLLDIVPESSELVVEAHVAINDIDRISIGKLTDVHFSAFNSA 359

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
                +  + +I     + D     + YY V +K+T+       + +L+ G PAEVL  A
Sbjct: 360 TTPVIEGEVTRISADRLKDDAG---EPYYLVRVKLTEKGMKRLGDRKLQPGMPAEVLINA 416

Query: 418 KNTTLAQEIIHPITDNWPK 436
              T+ Q ++ P ++ + K
Sbjct: 417 GERTMLQYLLKPASNVFIK 435


>gi|238650762|ref|YP_002916617.1| type I secretion adaptor protein [Rickettsia peacockii str. Rustic]
 gi|238624860|gb|ACR47566.1| type I secretion adaptor protein [Rickettsia peacockii str. Rustic]
          Length = 511

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 173/432 (40%), Gaps = 27/432 (6%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M  L +IG  GL  WS L P++    + G ++   N   I+    GII    V+ G ++ 
Sbjct: 91  MIFLVLIG--GL--WSALAPLDSGAVAVGIVMPSTNKKTIQHHEGGIINAIYVKQGDKVK 146

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L+   ++E T +    +  +   R  + TE   +   +N   +    F  ++  L 
Sbjct: 147 EGDKLI---ELEETRIKSEHENILGQYRNFLATENRLIAERDNLEQIEFSDFLMQDINLP 203

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKD 198
           +     H T   +F      VY S K  L +  +    +++ LE K          +Q  
Sbjct: 204 EVAKIIH-TQENLFR-SRKEVYNSEKDALHQNIAQLEKKIEGLEAKKVAASKTAEVYQDR 261

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN- 257
           L  ++ L EK  V +  L  QE  V  S    + ++   +  +  I     E  ++  N 
Sbjct: 262 LKALRTLKEKGFVKKAALLDQEAKVAAS----KSDVATTEAEIAGIRHAITETQIKIINQ 317

Query: 258 ---YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNYAQ 313
              Y +    +L + Q   A    K   L  +  +  I SP+ G IV N  + +      
Sbjct: 318 QNKYTERTLTELCEAQVQTASLKEKYNALTDSLNRVIIRSPVDG-IVNNLKYHTIGGVIS 376

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F   +  I P 
Sbjct: 377 HGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRITPTFTGKVVSISPD 436

Query: 374 ISQ---QDNNLQTQEYYEVILKITDLAFSD----NNIELRNGFPAEVLFTAKNTTLAQEI 426
           I Q   Q    Q   YY   ++I   AF+      N+EL  G  AEV       TL + +
Sbjct: 437 IVQDERQHPGQQQDNYYVARVEIDMDAFNKVAKVKNLELHPGMQAEVQIVTGTRTLLRYL 496

Query: 427 IHPITDNWPKIF 438
           + P+TD   K F
Sbjct: 497 LDPVTDTAFKAF 508


>gi|71282458|ref|YP_269145.1| HlyD family type I secretion membrane fusion protein [Colwellia
           psychrerythraea 34H]
 gi|71148198|gb|AAZ28671.1| type I secretion membrane fusion protein, HlyD family [Colwellia
           psychrerythraea 34H]
          Length = 441

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 97/434 (22%), Positives = 182/434 (41%), Gaps = 36/434 (8%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++ +T + +  I  L+ WSI   +E    + G+++   +   I+S   G I    VE G 
Sbjct: 29  IRNITYMILGSIFCLLLWSIFSKVEEIAKAQGQVVPLGHRQVIQSQLGGTINAIVVEEGD 88

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAF 131
            + +G  L+ F  I +    +       NL     R     E+   DF  N Y+ +    
Sbjct: 89  VVKKGDVLVNFIAINSQSAKEELASKYANLMMKKERLSAFKERREADF--NDYNEVYPRL 146

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             ++ Q L   G  +S    + +   S V +S        ++ Y     +E +   L+  
Sbjct: 147 ALQQRQAL---GSMNSELVAIESLSKSDVAKS--------QAEYHA---IEKEIPALKDQ 192

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + + +K L MM  L +   +SQ  L   QQ+   Y+  L + E   +++ + ++++ L +
Sbjct: 193 IIASEKTLAMMTTLAKTGGISQLKLLETQQKLDSYQRELSVLEG--KEQVLSKNMSNLNE 250

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           + N + A+ LK +   L + Q       ++    +    Q T+++P+ G I   QS  SS
Sbjct: 251 QLNNKKASLLKLVGETLTETQGEILAVEARQRSSDSDVSQSTVVAPVNGII---QSIPSS 307

Query: 310 NYAQQSQP---LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +      P   +  IVP ++   + AK++P+ I  V  G  A ++   +   R      I
Sbjct: 308 SVGSVIPPGGTVAVIVPVTEKALLEAKLSPRDIGFVSIGQKARIKIDAFDYSRYGALDGI 367

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQ 424
           ++KI P     D + +   +Y+V + I    F  N  ++EL  G   E      + T+ Q
Sbjct: 368 VKKISP---STDADERGGVFYKVQIAIDKPYFGKNPGDLELIPGMTGEADIVTGDKTIFQ 424

Query: 425 EIIHPITDNWPKIF 438
            +  P+  N    F
Sbjct: 425 YLWKPVFTNVTSAF 438


>gi|320325890|gb|EFW81950.1| HlyD family secretion protein [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320330298|gb|EFW86282.1| HlyD family secretion protein [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330882642|gb|EGH16791.1| HlyD family secretion protein [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 440

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 90/438 (20%), Positives = 182/438 (41%), Gaps = 41/438 (9%)

Query: 16  SLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            ++R+ +  ++   GL  TW+ L P+  +V  SG ++ +     ++    GI+K+    +
Sbjct: 22  GIRRVGVAIVLVTFGLFGTWAALAPLGNAVYGSGVVMVQSYRKTVQHLEGGIVKELLARD 81

Query: 75  GSQILQGTPLLTFEDIE-------TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           G  + +  PL+  +D +       T + +   +     LR   D E S++  L       
Sbjct: 82  GDTVHKDDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERD-ELSSIPPLTISGTDS 140

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS----LKMKLTRMRSIYLNRLDLEN 183
           ++A E+ E +   F  + +S  +++      SV R     LK ++  +R +   ++ LE 
Sbjct: 141 QRAREAIEGEEQVFRTRKNSRQTEI------SVQRERIGQLKQQIIGLRDMIRTKVSLEK 194

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                     S+  ++T +K+L  +  V +  L +QER +      L+  + + ++ +  
Sbjct: 195 ----------SYSSEITELKDLLSQGFVDKQRLLEQERKLDM----LKSEVADHESTITK 240

Query: 244 INELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                 E  L+      N+  E++++L   Q    D     T L+    +  I +P  G 
Sbjct: 241 TQLQISETELQIIQLNKNFSSEVAKELSDVQAKVFDLQETATALQDRLSRVVIRAPEDGM 300

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           ++  +  +         PL+ IVP S    + A V    I  +  G    V F  +    
Sbjct: 301 VLDMKVHTVGGVVSAGTPLLDIVPESSELVVEAHVAINDIDRISIGKLTDVHFSAFNSAT 360

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
               + ++ +I     + D     + YY V +K+T+       + +L+ G PAEVL  A 
Sbjct: 361 TPVIEGVVTRISADRLKDDAG---EPYYLVRVKLTEKGLKRLGDRKLQPGMPAEVLINAG 417

Query: 419 NTTLAQEIIHPITDNWPK 436
             T+ Q ++ P ++ + K
Sbjct: 418 ERTMLQYLMKPASNVFIK 435


>gi|157828303|ref|YP_001494545.1| alkaline protease secretion protein AprE [Rickettsia rickettsii
           str. 'Sheila Smith']
 gi|165933008|ref|YP_001649797.1| HlyD family type I secretion adaptor protein [Rickettsia rickettsii
           str. Iowa]
 gi|157800784|gb|ABV76037.1| alkaline protease secretion protein AprE [Rickettsia rickettsii
           str. 'Sheila Smith']
 gi|165908095|gb|ABY72391.1| type I secretion adaptor protein (HlyD family) [Rickettsia
           rickettsii str. Iowa]
          Length = 511

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 172/432 (39%), Gaps = 27/432 (6%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M  L +IG  GL  WS L P++    + G ++   N   I+    GII    V+ G ++ 
Sbjct: 91  MIFLVLIG--GL--WSALAPLDSGAVAVGIVMPSTNKKTIQHHEGGIINAIYVKQGDKVK 146

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L+   ++E T +    +  +   R  + TE   +   +N   +    F  ++  L 
Sbjct: 147 EGDKLI---ELEETRIKSEHENILGQYRNFLATENRLMAERDNLEQIEFSDFLMQDINLP 203

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKD 198
           +     H T   +F      VY S K  L +  +    +++ LE K          +Q  
Sbjct: 204 EVAKIIH-TQENLFR-SRKEVYNSEKDALHQNIAQLEKKIEGLEAKKVAASKTAEVYQDR 261

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN- 257
           L  ++ L EK  V +  L  QE  V  S    + ++   +  +  I     E  ++  N 
Sbjct: 262 LKALRTLKEKGFVQKAALLDQEAKVAAS----KSDVATTEAEIAGIRHAITETQIKIINQ 317

Query: 258 ---YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNYAQ 313
              Y +    +L + Q   A    K   L  +  +  I SP+ G IV N  + +      
Sbjct: 318 QNKYTERTLTELREAQVQTASLKEKYNALTDSLNRVIIRSPVDG-IVNNLKYHTIGGVIS 376

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F   +  I P 
Sbjct: 377 HGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFTGKVVSISPD 436

Query: 374 ISQ---QDNNLQTQEYYEVILKITDLAFSD----NNIELRNGFPAEVLFTAKNTTLAQEI 426
           I Q   Q    Q   YY   ++I    F+      N+EL  G  AEV       TL + +
Sbjct: 437 IVQDERQHPGQQQDNYYVARVEIDMDEFNKVAKVKNLELHPGMQAEVQIVTGTRTLLRYL 496

Query: 427 IHPITDNWPKIF 438
           + P+TD   K F
Sbjct: 497 LDPVTDTAFKAF 508


>gi|78777902|ref|YP_394217.1| Type I secretion membrane fusion protein, HlyD [Sulfurimonas
           denitrificans DSM 1251]
 gi|78498442|gb|ABB44982.1| Type I secretion membrane fusion protein, HlyD [Sulfurimonas
           denitrificans DSM 1251]
          Length = 431

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 94/424 (22%), Positives = 183/424 (43%), Gaps = 48/424 (11%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W    P+  S  + G++  + +   I+    G I+K  V++G ++ +   LL   D++  
Sbjct: 34  WMAYAPLASSAVAVGKVSADLDKKTIQHLEGGKIEKIYVKDGDRVKKDQILLKLSDVQI- 92

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ-----LLDFLGKYHST 148
                               K+ L+ LN++Y      F   + Q     +++FL +  ST
Sbjct: 93  --------------------KAQLNILNSQYQDALALFARLKAQRDGDKVIEFLPE--ST 130

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQ-KDLTMMKNLF 206
              +      +++ + K K+     I  NR+  L+N+   L +L+ S + +  ++ + + 
Sbjct: 131 DENIIKNQ-RNIFETTKRKIEDENIITNNRITQLQNQIDGLNSLIKSKENRRASISEEIL 189

Query: 207 EKNAVSQNDLNQQERI--VYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLK 260
           E  ++ +  L  ++RI  + +    +  ++   K+ +  INE   E      L    + K
Sbjct: 190 EWESLYKQRLVDKQRIRDLQRENNMIEGDLASTKSDIAKINEQISELQTQQLLREKEFQK 249

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E      + +   AD  SK+T  E T E+  I++PI G +V  +  +       ++P+++
Sbjct: 250 ETLERYVEAKSHIADLKSKITATEDTLERTAIVAPIDGIVVGFEIHTEGGVVSPAKPILE 309

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK---KFKAIIEKIDPIISQQ 377
           IVP      + A+V    I  V+ G  A +RF  + D+R+    + K +    D  I+ Q
Sbjct: 310 IVPQDSKLIVVAQVQITDIDKVQVGLIADIRFSAF-DLRQSHVVEGKVVHVSADSFIN-Q 367

Query: 378 DNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
           D   Q   YY   +++T     +  DN+  L +G PAEV+      T    ++ P  D +
Sbjct: 368 DGKTQ---YYSAKIEVTKEGVKSLQDNHFVLVSGMPAEVMIKTGERTALSYLLKPFMDMF 424

Query: 435 PKIF 438
            + F
Sbjct: 425 SRSF 428


>gi|148973908|ref|ZP_01811441.1| Secretion protein, HlyD family [Vibrionales bacterium SWAT-3]
 gi|145965605|gb|EDK30853.1| Secretion protein, HlyD family [Vibrionales bacterium SWAT-3]
          Length = 441

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/373 (21%), Positives = 160/373 (42%), Gaps = 44/373 (11%)

Query: 6   WKNLKRNHPASLKR----MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           W N   NH A   R    ++ L I+ IIG  TW+ L   E  V   G+++   +V  I+S
Sbjct: 7   WTN---NHLAFRSRKLIWLSALLIVSIIGWATWATL---EEVVIGEGKVVPSLSVQTIQS 60

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEK 114
              G++++  V  G  +++G PL   ED       +E+    D        LR  + T  
Sbjct: 61  LEGGLVQEIMVRQGQSVVKGQPLAKLEDTRFKAAFLESAQQADTLLAQQLRLRAELST-- 118

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMR 172
             +   N+  +  E+     ++ ++D +  + +  +   NY   +  +   L+    R+ 
Sbjct: 119 --VVLNNDAKEWYERVVLVPQDIVVD-VSSHPALMNAKANYLERLGQLKSELEEAALRIE 175

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                R+D  N    L + L    ++  M+K++    AV++ +L +  R V K   ++  
Sbjct: 176 QQAQARVDTLNNIQTLESSLDIVIRERNMLKDVVASGAVAEVELLKLNRDVVKLKGDIAS 235

Query: 233 N-IHEQKNMLRHINELYDEANLEF------ANYLKEISRDLEQ---NQRTFADEMSKLTI 282
           + +  QK M  +   + D  ++           L E++  + Q   +Q+  AD++ +   
Sbjct: 236 SRVAAQKQMAAYSESIADHRSIALDFRTKVQGQLNEVTSKIAQLNESQQAIADQLKR--- 292

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                    I++P+ GT+      +     +  +P+++++P +    + AK++P+ I  V
Sbjct: 293 -------TEIVAPVDGTVKEIFVRTIGGVVRPGEPIIELIPSNSQLIVEAKISPQDIAFV 345

Query: 343 KKGYTATVRFPHY 355
             G  AT++F  Y
Sbjct: 346 HTGLDATIKFSAY 358


>gi|32456002|ref|NP_862004.1| rb129 [Ruegeria sp. PR1b]
 gi|22726354|gb|AAN05150.1| RB129 [Ruegeria sp. PR1b]
          Length = 436

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 94/445 (21%), Positives = 183/445 (41%), Gaps = 45/445 (10%)

Query: 17  LKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           ++R  +   +G+     G+I W     I  +V +SG+I  + N   ++    GI+ +  V
Sbjct: 11  VRRTMIFGFLGVFALLGGVIAWIAFSSISGAVVASGQIEVDRNRQVVQHIDGGIVAEILV 70

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL------RCHIDTEKSALDFLNNKYDV 126
           E G  +  G  LL    ++ TDLI   +++   L      R  ++ E+   D ++   ++
Sbjct: 71  EEGDVVEVGQVLLR---LDATDLISQLRITENQLFEMMARRGRLEAERDEADEIHFAPEL 127

Query: 127 LEKAFESREEQLLDFL-GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           L    +     + DF+ G+      ++F     SV R +     R   I    L ++ + 
Sbjct: 128 L--TLKDTRPDVADFVQGQL-----RLFQARRESVEREVAQLDKRASQIKDQILGIQAQQ 180

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAV----------SQNDLNQQERIVYKSTLELRENIH 235
              R  L   Q++L   + LF++             +Q DL  +   +  S  + R  I 
Sbjct: 181 KATREQLDLIQEELNNQQALFDRGLAQASVVVNLERNQADLEGRLGELTASEAQARGRIT 240

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           E +     +     E  +     ++   R L +N+R   D + ++ I+          +P
Sbjct: 241 ELEIEALGLRTQRQETAIGQLRDMRYRERQLMENRRAMRDRLDRMDIV----------AP 290

Query: 296 IAGTIVYNQSFSSS-NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           ++G +VY  +  +  +  + ++PL+ +VP  +   I A+V P  I  +  G + +VR P 
Sbjct: 291 VSG-VVYGLAVKTPRSVIRPAEPLLYLVPQDRPLVISAQVAPTDIDQIYVGQSVSVRLPA 349

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP-AEV 413
               R  +    + ++     Q D + ++    E+ L   +L        L  G P +  
Sbjct: 350 LDQRRTPELFGTVTRVSADAFQDDASGRSFYRSEIQLDPGELERLPEGTSLVPGMPVSSF 409

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIF 438
           L TA  + LA  +I P+TD + + F
Sbjct: 410 LKTADRSPLAY-LIKPLTDYFARAF 433


>gi|34580644|ref|ZP_00142124.1| alkaline protease secretion protein AprE [Rickettsia sibirica 246]
 gi|28262029|gb|EAA25533.1| alkaline protease secretion protein AprE [Rickettsia sibirica 246]
          Length = 511

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 172/440 (39%), Gaps = 43/440 (9%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M  L +IG  GL  WS L P++    + G ++   N   I+    GII    V+ G ++ 
Sbjct: 91  MIFLVLIG--GL--WSALAPLDSGAVAVGIVMPSTNKKTIQHHEGGIINAIYVKQGDKVK 146

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G             LI+L++  IK+   H +      +FL  +  ++ +     + +  
Sbjct: 147 EGD-----------KLIELEETRIKS--EHDNILGQYRNFLATENRLIAERDNLEQIEFS 193

Query: 140 DFL---------GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           DFL          K   T   +F      VY S K  L +  +    +++ LE K     
Sbjct: 194 DFLMQDINLPEVAKIIHTQENLFR-SRKEVYNSEKDALHQNIAQLEKKIEGLEAKKVAAS 252

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                +Q  L  ++ L EK  V +  L  QE  V  S    + ++   +  +  I     
Sbjct: 253 KTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAAS----KSDVATTEAEIAGIRHAIT 308

Query: 250 EANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E  ++  N    Y +    +L + Q   A    K   L  +  +  I SP+ G +   + 
Sbjct: 309 ETQIKIINQQNKYTERTLTELREAQVQTASLKEKYNALTDSLNRVIIRSPVDGIVNSLKY 368

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +        QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F  
Sbjct: 369 HTIGGVISHGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFTG 428

Query: 366 IIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFSD----NNIELRNGFPAEVLFTAK 418
            +  I P I Q +     Q+   YY   ++I    F+      N+EL  G  AEV     
Sbjct: 429 KVVSISPDIVQDERQYPGQQQDNYYVARVEIDMDEFNKVAKVKNLELHPGMQAEVQIVTG 488

Query: 419 NTTLAQEIIHPITDNWPKIF 438
             TL + ++ P+TD   K F
Sbjct: 489 TRTLLRYLLDPVTDTAFKAF 508


>gi|253687945|ref|YP_003017135.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754523|gb|ACT12599.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 442

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 86/461 (18%), Positives = 192/461 (41%), Gaps = 71/461 (15%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +  +R+   +++   LL + G  G + W++  P++  V  +G ++   N   ++    
Sbjct: 11  MNQTAQRDEKRAVRLGWLLVLAGFGGFLLWALFAPLDKGVMVNGSVVISGNRKVVQHNQG 70

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ K QV++G ++  G  LLT  +++                      +SA + L+ +Y
Sbjct: 71  GIVDKIQVKDGDRVEAGQILLTLNEVDA---------------------RSASEGLDGQY 109

Query: 125 DVL---EKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYR--------SLKMKLTRM 171
             L   E    + +++L D +   +      K     I+++ R        SLK++   M
Sbjct: 110 LQLVAREGRLLAEQQRLSDMVMTPRLQPLAEKPEMSVITALQRDLLRSRQQSLKLEAEGM 169

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKD-------LTMMKNLFEKNAVSQNDLNQQERIVY 224
           RS       +E   +  R ++SS QK        L  +++L  +N V +N + + ER++ 
Sbjct: 170 RSSIAG---MEASLNAQRQVMSSKQKQRETLEQQLQGLRSLAAENYVPRNKMLENERLLA 226

Query: 225 KSTLEL----------RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +   ++          R +I +Q  ++    + YD          KE++ +L + +   +
Sbjct: 227 QLNGDIAQLAGDINRTRRDIEQQTLLIAQRQQEYD----------KEVNSELAEVRALLS 276

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           D  SK    +       + +P++GT+V  + F+        Q L++IVP  +   + A++
Sbjct: 277 DVGSKKEKADFNLANIQMRAPVSGTVVGLKVFTEGGVIAPGQTLLEIVPDDQPLLVDARL 336

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILK 392
             + +  +  G    ++F  +      +    +E +  D ++ ++D +     YY + + 
Sbjct: 337 PVELVDKIWPGLPVELQFVAFNQSTTPRVAGTVELLSADRLLDERDGS----PYYSLRVM 392

Query: 393 ITDLA-FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           + D    +   +E++ G P +        +    +  P+ D
Sbjct: 393 VDDEGKRALEGLEIKPGMPVQGFVRTGERSFVNYLFKPLMD 433


>gi|229586576|ref|YP_002845077.1| HlyD family secretion protein [Rickettsia africae ESF-5]
 gi|228021626|gb|ACP53334.1| HlyD family secretion protein [Rickettsia africae ESF-5]
          Length = 511

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 172/431 (39%), Gaps = 25/431 (5%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M  L +IG  GL  WS L P++    + G ++   N   I+    GII    V+ G ++ 
Sbjct: 91  MIFLVLIG--GL--WSALAPLDSGAIAVGIVMPSTNKKTIQHHEGGIINAIYVKQGDKVK 146

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L+   ++E T +    +  +   R  + TE   +   +N   +    F  ++  L 
Sbjct: 147 EGDKLI---ELEETRIKSEHENILGQYRNFLATENRLIAERDNLEQIEFSDFLMQDINLP 203

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKD 198
           +     H T   +F      VY S K  L +  +    +++ LE K          +Q  
Sbjct: 204 EVAKIIH-TQENLFR-SRKEVYNSEKDALHQNIAQLEKKIEGLEAKKVAASKTAEVYQDR 261

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN- 257
           L  ++ L EK  V +  L  QE  V  S  ++   I  +   +RH      E  ++  N 
Sbjct: 262 LKALRTLKEKGFVQKAALLDQEAKVAASKSDV-ATIEAEIAGIRH---AITETQIKIINQ 317

Query: 258 ---YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              Y + I  +L + Q   A    K   L  +  +  I SP+ G +   +  +       
Sbjct: 318 QNKYTERILTELREAQVQTASLKEKYNALTDSLNRVIIRSPVDGIVNSLKYHTIGGVISH 377

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F   +  I P I
Sbjct: 378 GQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFTGKVVSISPDI 437

Query: 375 SQQDNNLQTQE---YYEVILKITDLAFSD----NNIELRNGFPAEVLFTAKNTTLAQEII 427
            Q +     Q+   YY   ++I    F+      N+EL  G  AEV       TL + ++
Sbjct: 438 VQDERQYPGQQQDNYYVARVEIDMDEFNKVAKVKNLELHPGMQAEVQIVTGTRTLLRYLL 497

Query: 428 HPITDNWPKIF 438
            P+ D   K F
Sbjct: 498 DPVIDTAFKAF 508


>gi|319777873|ref|YP_004134303.1| type I secretion membrane fusion protein, hlyd family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317171592|gb|ADV15129.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 436

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 85/427 (19%), Positives = 175/427 (40%), Gaps = 29/427 (6%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
           SI+ + G  + + ++ +  +V  SG+++ + +V +++ P  G++ +  V  G  +  G  
Sbjct: 24  SILLVGGAGSLAAVIDLSGAVIGSGKLVVDSSVKKVQHPTGGVVGQIFVREGDAVQAGQV 83

Query: 84  LLTFEDIET----------TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           L+  ++  T           D +D +   +K  R   D        ++ + D       +
Sbjct: 84  LIHLDETVTRANLAIVTKSADELDARLARLKAERDGADAIGFPPSLMSRRDDPDVSGTMA 143

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            E+ L +F  +  +         IS +   +   LT  +         + KS  ++ + +
Sbjct: 144 GEQSLFEFRRQARAGQKAQLAERISQLAEEVS-GLTEQK---------DAKSQEIKLIGT 193

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               +L  M+ L+E+  VS + +   ER   +   E  + I        H +E+  +   
Sbjct: 194 ----ELAGMRTLWERKLVSIDRITALEREAVRLEAEHGQLIAAIAQSKGHTSEIRLQIIQ 249

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              +   E++ +L + Q   ++ + +    E   ++  I SP AG ++     +      
Sbjct: 250 IDQDLRSEVATELREVQAKLSELVERKVSAEDQLKRIDIRSPQAGVVLQLAVHTIGGVIT 309

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             +P+M IVP +    + A+V P+ I  +K+G  AT+R   +      +    + KI   
Sbjct: 310 AGEPVMLIVPVADRLTVEARVAPQDIDQLKQGQEATLRLSAFNQRTTPELNGSVSKISAD 369

Query: 374 ISQQDNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           +S  +       YY V  +L  T+LA     + L  G P EV FT  + T+   ++ P+ 
Sbjct: 370 LSTDERT--GAGYYTVHIVLPRTELARL-KRLTLAPGMPVEVFFTTSSRTMLSYLVKPLA 426

Query: 432 DNWPKIF 438
           D   + F
Sbjct: 427 DQIQRAF 433


>gi|296537379|ref|ZP_06899234.1| possible alkaline proteinase secretion protein [Roseomonas
           cervicalis ATCC 49957]
 gi|296262293|gb|EFH09063.1| possible alkaline proteinase secretion protein [Roseomonas
           cervicalis ATCC 49957]
          Length = 424

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 84/437 (19%), Positives = 175/437 (40%), Gaps = 58/437 (13%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           + G   WS   P+  +  + G+I +E N   I+    GI+++    +G ++  G  L+  
Sbjct: 17  VGGFGAWSAFAPLAEAAIAPGQIRSEGNRRTIQHLEGGIVREILARDGDRVRAGQVLMRL 76

Query: 88  EDIET-TDLIDLKKVSIKNL--RCHIDTEKS------------------ALDFLNNK--- 123
           +D+++ T L  L+      L     +D E                    AL+ + ++   
Sbjct: 77  DDVQSVTGLETLRAQHWAFLAQEARLDAEARGAGEIAFPAPLRDSPDPRALEIMTSQRTL 136

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +   + + +S+ + L   + ++ +T S      I+S  R L+          L R +  +
Sbjct: 137 FAARQTSLQSQLQVLEARIAQHEATASSAQGQ-IASQRRQLE----------LIRREEAS 185

Query: 184 KSSLLRALLSSHQKDLTMMKNL--FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
              L+R  L    + L + +N+   E N V   DLN Q      S         E +N +
Sbjct: 186 VVELVRQGLERMPRLLALQRNVASLEGNMV---DLNGQVERAQASA-------EEARNQM 235

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R + +            L EI+ +  +N+    +   KL   +    ++ I++P  GTI+
Sbjct: 236 RQVRD----------QRLAEITGEARENRTRLHEAAEKLRAAQDVATRREIVAPEDGTIL 285

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
            ++ F+     +  +P+M++VP         +++P  I  V  G  A VR P +      
Sbjct: 286 GSRFFNLGAVIRPGEPVMELVPAEDRLVADVQLSPNDIDVVYPGLQAEVRLPAFKQRLVP 345

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                +  +   ++  +    +    ++++    LA  +N + LR G P E      + +
Sbjct: 346 FLHGHVTYVASDVTTDERTRASHYRVQIVIDQEQLARLENVV-LRAGMPVEAQIQTGSRS 404

Query: 422 LAQEIIHPITDNWPKIF 438
             + ++ P+ D++ + F
Sbjct: 405 FFRYMMQPVLDSFHRAF 421


>gi|260778640|ref|ZP_05887532.1| HlyD family secretion protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604804|gb|EEX31099.1| HlyD family secretion protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 437

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 90/447 (20%), Positives = 175/447 (39%), Gaps = 60/447 (13%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +N   +L   T    + +I  +TWS++  ++    + G ++ E     ++S   G +K+ 
Sbjct: 19  QNTARTLALATWSVALCVIAFVTWSVVTQVDEIAKAKGAVIPEGEKQVLQSAIGGKLKQI 78

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V+ G  + +G PL+ F+          ++ +++ L+    T  ++++ +N   D  E  
Sbjct: 79  LVKEGQLVEKGQPLVEFD-------ATFQRTALEELKSQQVTLLASIERMNALLDDREPN 131

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-----DLENKS 185
           F   E   +DF                  +    K +L   + +Y  +      D E  +
Sbjct: 132 FGEFE---IDF----------------PEIVSQQKAQLNAQKGLYYQKRIVLEKDSEQIA 172

Query: 186 SLLRAL---LSSHQKDLTMMK---NLFEKNAVSQNDLNQQERIVYKSTLELREN------ 233
             LR +   L S+ K+L   K   N+ EK        N+   I     LE+R+       
Sbjct: 173 EQLRVVEKSLPSYDKELNATKQELNILEKG-------NKAGNISRLRVLEMRQKLASIEQ 225

Query: 234 -IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-- 290
            I E +     + +  D    +    L E    +  ++     ++S L    ++ + K  
Sbjct: 226 KIEEARGKKSVLIKQADSNEQKIEQLLAEAKAKVSDDRSKAVSDLSALNARVRSSQAKLT 285

Query: 291 --TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              ++SP+ G +    S  +    Q    +++IVP       +A+++P+ I  V  G   
Sbjct: 286 NTMLVSPLQGLVQSLPSTQNGGVIQPGGTVVEIVPVGGKADFKARLSPRDIGFVNVGQPT 345

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELR 406
            ++   +   R    K  +E I P  SQ +     + YYEV++ +    F DN  +  + 
Sbjct: 346 RIKIDAFDYSRFGALKGEVESISPTTSQSERG---EIYYEVVVSVETPYFRDNPESFSIL 402

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITDN 433
            G   EV  T    ++ Q +  PI  N
Sbjct: 403 PGMTGEVDITTGEKSVFQYLWKPIYTN 429


>gi|223040599|ref|ZP_03610870.1| SapE [Campylobacter rectus RM3267]
 gi|222878147|gb|EEF13257.1| SapE [Campylobacter rectus RM3267]
          Length = 427

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 95/454 (20%), Positives = 180/454 (39%), Gaps = 79/454 (17%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEI--LNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +T+  ++G+ G   W+   P++    + G++  +N+  VV+      G++ +  V++G +
Sbjct: 15  LTIFILVGVFG--GWAAFAPLKSGAVAVGKVSVINDKKVVQ--HLEGGVVDEIYVKDGYK 70

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE--------- 128
           + +G  LL                 ++N +   +   S  D+L N   VLE         
Sbjct: 71  VKEGDILL----------------KMRNSKLQAELNASQTDYLQNS--VLEARLIAQRDN 112

Query: 129 -------------KAFESREEQLLDFLGKYHSTCS---KVFNYGISSVYRSLKM--KLTR 170
                        K F+   E  +    +     S   ++ N  IS +Y+ +     +  
Sbjct: 113 EEQIKFSDELKKLKGFKRASEAQISIFNEQRKILSDEKEILNQRISQLYKQIDGLNAIIS 172

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            R + +  LD E K      L      D   +++L            ++E+I      E+
Sbjct: 173 SRKLRVESLDEETKE--WDRLYKEQLSDKIRLRDL------------KREKIAIDG--EI 216

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             N  E   +   I E   +  L  + + +++ + LE   ++     SK   L     + 
Sbjct: 217 ASNTAEIARLNVQITETKSQMILRESAFKEDVLKQLESVTKSINTLRSKYIALNDQLART 276

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P++GTIV   + +     +   P+M IVP S    + A++    I  V  G  + V
Sbjct: 277 EVRAPVSGTIVGMTAHTVGGVIRPGDPIMYIVPDSTEYIVEARMNLTDIDKVTIGLLSDV 336

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQ---QDNNLQTQEYYEVILKITDLA---FSDNNIE 404
           RF  +    E +   ++E     IS    QD N    ++YE+ +K+TD       +N   
Sbjct: 337 RFSAF----ELQQAHVVEGEVVYISADSLQDGN--GHQFYEIKVKLTDKGVKELENNKFF 390

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           L  G PAEV+    N T+   I++P T+ + + F
Sbjct: 391 LLPGMPAEVMVQTSNRTVLSYILNPFTNMFKRAF 424


>gi|66044189|ref|YP_234030.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae B728a]
 gi|63254896|gb|AAY35992.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae B728a]
          Length = 440

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 87/439 (19%), Positives = 182/439 (41%), Gaps = 43/439 (9%)

Query: 16  SLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            ++R+ +  ++   GL  TW+ L P++ +V  SG ++ +     ++    GI+K+  V +
Sbjct: 22  GIRRIGVTIVLVTFGLFGTWAALAPLDNAVYGSGLVMVQSYRKTVQHLEGGIVKELLVRD 81

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALD-----FLNNKYDV 126
           G  + +G PL+  +D +     +  +   +S +     +  E+  L       +     V
Sbjct: 82  GDTVHKGDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELPSIPPLTITGTDSV 141

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR----SLKMKLTRMRSIYLNRLDLE 182
             K   + E+Q+  F  + +S  +++      SV R     LK +++ +R +   ++ LE
Sbjct: 142 RAKEAIAGEQQV--FSTRKNSRLTEI------SVQRERIGQLKQQISGLRDMIRTKVSLE 193

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                      S+  ++T +K+L  +  V +  L +QER +      L+  + + ++ + 
Sbjct: 194 K----------SYSSEITELKDLLSQGFVDKQRLLEQERKLDM----LKSEVADHESTIT 239

Query: 243 HINELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                  E  L+      N+  +++++L   Q    D       L+    +  I +P  G
Sbjct: 240 KTQLQISETELQIIQLNKNFSSDVAKELSDVQAKVFDLQETANALQDRLSRVVIRAPEDG 299

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +  +         PL+ IVP S    + A V    I  +  G    V F  +   
Sbjct: 300 MVLDMKVHTVGGVVSAGTPLLDIVPESSELVVEAHVAITDIDRISIGKLTDVHFSAFNSA 359

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
                +  + +I     + D     + YY V +K+T+       + +L+ G PAEVL  A
Sbjct: 360 TTPVIEGEVTRISADRLKDDAG---EPYYLVRVKLTEKGMKRLGDRKLQPGMPAEVLINA 416

Query: 418 KNTTLAQEIIHPITDNWPK 436
              T+ Q ++ P ++ + K
Sbjct: 417 GERTMLQYLLKPASNVFIK 435


>gi|15892351|ref|NP_360065.1| alkaline protease secretion protein AprE [Rickettsia conorii str.
           Malish 7]
 gi|15619497|gb|AAL02966.1| alkaline protease secretion protein AprE [Rickettsia conorii str.
           Malish 7]
          Length = 511

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 171/431 (39%), Gaps = 25/431 (5%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M  L +IG  GL  WS L P++    + G ++   N   I+    GII    V+ G ++ 
Sbjct: 91  MIFLVLIG--GL--WSALAPLDSGAVAVGIVMPSTNKKTIQHHEGGIINAIYVKQGDKVK 146

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L+   ++E T +    +  +   R  + TE   +   +N   +    F  ++  L 
Sbjct: 147 EGDKLI---ELEETRIKSEHENILGQYRNFLATENRLIAERDNLEQIEFSDFLMQDINLP 203

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKD 198
           +     H T   +F      VY S K  L +  +    +++ LE K          +Q  
Sbjct: 204 EVAKIIH-TQENLFR-SRKEVYNSEKDALHQNIAQLEKKIEGLEAKKVAASKTAEVYQDR 261

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN- 257
           L  ++ L EK  V +  L  QE  V  S    + ++   +  +  I     E  ++  N 
Sbjct: 262 LKALRTLKEKGFVQKAALLDQEAKVAAS----KSDVATTEAEIAGIRHAITETQIKIINQ 317

Query: 258 ---YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              Y +    +L + Q   A    K   L  +  +  I +P+ G +   +  +       
Sbjct: 318 QNKYTERTLTELREAQVQTASLKEKYNALTDSLNRVIIRAPVDGIVNSLKYHTIGGVISH 377

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F   +  I P I
Sbjct: 378 GQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFTGKVVSISPDI 437

Query: 375 SQQDNNLQTQE---YYEVILKITDLAFSD----NNIELRNGFPAEVLFTAKNTTLAQEII 427
            Q +     Q+   YY   ++I    F+      N+EL  G  AEV       TL + ++
Sbjct: 438 VQDERQYPGQQQDNYYVARVEIDMDEFNKVAKVKNLELHPGMQAEVQIVTGTRTLLRYLL 497

Query: 428 HPITDNWPKIF 438
            P+TD   K F
Sbjct: 498 DPVTDTAFKAF 508


>gi|157827348|ref|YP_001496412.1| alkaline protease secretion protein AprE [Rickettsia bellii OSU
           85-389]
 gi|157802652|gb|ABV79375.1| Alkaline protease secretion protein AprE [Rickettsia bellii OSU
           85-389]
          Length = 510

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 172/440 (39%), Gaps = 17/440 (3%)

Query: 11  RNHPASLKRMTLL-SIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           RN+ A   R  +L  I  II L+     W  + P++    + G ++   N   I+    G
Sbjct: 73  RNNVAQAARSPILFGIYVIIFLVLIGGVWMAVAPLDSGAVAVGILMPSTNKKTIQHHEGG 132

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           II    V+ G ++  G  L+   ++E T +    + ++   R  + TE   +   +N   
Sbjct: 133 IINAIYVKQGDKVKAGDKLI---ELEETRIKSEHESTLSQYRTALATENRLIAERDNLEQ 189

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENK 184
           +    F  ++  L +     H T   +F      V+ S K  L +  S    R++ LE K
Sbjct: 190 IEFSDFLMQDINLPEVAKIIH-TQENLFR-SRKEVFNSEKDALQQRISQLEKRVEGLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  +K L EK  V +  L +QE  V  +  ++     E       I
Sbjct: 248 KVAATKTAEVYQDRLKALKTLKEKGFVQKAALLEQEAKVASAKSDVATTDTEIAGTHHSI 307

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E       +   Y +    +L + Q   A    K   L  +  +  I SP+ G I   +
Sbjct: 308 TEAQISIITQQNKYTERTLTELREAQVQAASLREKYNSLTDSLNRIVIKSPVDGIINNLK 367

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +   Y    QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F 
Sbjct: 368 YHTIGGYIGHGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFT 427

Query: 365 AIIEKIDPIISQQDNNLQTQE--YYEVILKITDLAFSD----NNIELRNGFPAEVLFTAK 418
             +  + P I Q +     Q+  YY   ++I    F+      N+EL  G  AEV     
Sbjct: 428 GKVVSVSPDIVQDERQHPGQQDNYYVARVEIDMDEFNRIAKIKNLELHPGMQAEVQIVTG 487

Query: 419 NTTLAQEIIHPITDNWPKIF 438
             TL + ++ P+ D   K F
Sbjct: 488 TRTLLRYLLDPVIDTAFKAF 507


>gi|295701032|ref|YP_003608925.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           sp. CCGE1002]
 gi|295440245|gb|ADG19414.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           sp. CCGE1002]
          Length = 454

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 89/438 (20%), Positives = 167/438 (38%), Gaps = 45/438 (10%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           ++ ++GI+G + W+   P+       G ++   N   I+ P  GII++  V++G Q+  G
Sbjct: 38  IVVLVGIVGSLLWAAFAPLSKGTEVQGTVVVAGNRKTIQHPTGGIIREILVQDGDQVKAG 97

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR----EEQ 137
             L+   D++T       +     +R    TE      L  K  ++ +A  ++      +
Sbjct: 98  QVLVRMNDVQT-------RSQNATIRSQYLTE------LATKARLVAEATNAKTIAFPRE 144

Query: 138 LLDFLGKYHSTCSKVFNYG---ISSVYRSLKMKLTRMR---SIYLNRLDLENKSSLLRAL 191
           L D +  +              +S+   +LK  +  ++   + Y  +L  EN +   R L
Sbjct: 145 LTDGVAAHDQEAEADVQLQEQLLSARRLALKASIGALQESIAGYQAQLAGENDAHAQRLL 204

Query: 192 L-SSHQKDLTMMKNLFEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
              + Q  LT ++ L  +  V ++   DL +QE +       L   I  Q      +   
Sbjct: 205 EHQALQDQLTGVRELAIEGYVPRSKLKDLQRQEAV-------LNGEIARQAGTAGELASQ 257

Query: 248 YDEANLEFA----NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             EA L  A    +Y+KE+   L   QR      S+L   E       I SP+ GT+V  
Sbjct: 258 SAEARLRIAQAQEDYMKEVRTQLSDVQRDTEALRSRLDESEFNLANSEIRSPVDGTVVGM 317

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             F+          LM +VP  +       +    +  V+ G    + F  +      + 
Sbjct: 318 SVFTEGGTIGPGAKLMDVVPTGEPLEAEGHLEVNLVDKVRTGMPVDMMFTAFNQNTTPRV 377

Query: 364 KAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
              +  +  D ++ +         YY V  K+T+        ++++ G P E+   A   
Sbjct: 378 SGTLTFVSADRLVDEHTG----APYYRVRAKVTEQGMKQLRKLDIKPGMPVEIFINAGQR 433

Query: 421 TLAQEIIHPITDNWPKIF 438
           ++   ++ PI D     F
Sbjct: 434 SMLSYLLKPIFDRAHTAF 451


>gi|148974836|ref|ZP_01811816.1| HlyD family secretion protein [Vibrionales bacterium SWAT-3]
 gi|145965345|gb|EDK30594.1| HlyD family secretion protein [Vibrionales bacterium SWAT-3]
          Length = 437

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 89/447 (19%), Positives = 176/447 (39%), Gaps = 60/447 (13%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +N   +L   T    + +I  +TWS++  ++    + G ++ E     ++S   G +K+ 
Sbjct: 19  QNTARTLALATWSVALCVIAFVTWSVVTQVDEIAKAKGAVIPEGEKQVLQSAIGGKLKQI 78

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V+ G  + +G PL+ F+          ++ +++ L+    T  ++++ +N   D  E  
Sbjct: 79  LVKEGQLVEKGQPLVEFD-------ATFQRTALEELKSQQVTLLASIERMNALLDNREPN 131

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-----DLENKS 185
           F   E   +DF                  +    K +L   + +Y  +      D E  +
Sbjct: 132 FGEFE---IDF----------------PEIVSQQKAQLNAQKGLYYQKRIVLEKDSEQIA 172

Query: 186 SLLRAL---LSSHQKDLTMMK---NLFEKNAVSQNDLNQQERIVYKSTLELREN------ 233
             LR +   L S+ K+L+  K   N+ EK   + N       I     LE+R+       
Sbjct: 173 EQLRVVEKSLPSYDKELSATKQEQNILEKGYKAGN-------ISRLRVLEMRQKLASIEQ 225

Query: 234 -IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-- 290
            I E +     + +  D    +    L E    +  ++     ++S L    ++ + K  
Sbjct: 226 KIEEARGKKSVLIKQADSNEQKIEQLLAEAKAKVSDDRSKAVSDLSALNARVRSSQAKLT 285

Query: 291 --TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              ++SP+ G +    S  +    Q    +++IVP       +A+++P+ I  V  G   
Sbjct: 286 NTMLVSPLQGLVQSLPSTQNGGVIQPGGTVVEIVPVGGKADFKARLSPRDIGFVNVGQPT 345

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELR 406
            ++   +   R    K  +E I P  SQ +     + YYEV++ +    F DN  +  + 
Sbjct: 346 RIKIDAFDYSRFGALKGEVESISPTTSQSERG---EIYYEVVVSVETPYFRDNPESFSIL 402

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITDN 433
            G   E+  T    ++ Q +  PI  N
Sbjct: 403 PGMTGEIDITTGEKSVFQYLWKPIYTN 429


>gi|83312575|ref|YP_422839.1| membrane-fusion protein; multidrug resistance efflux pump
           [Magnetospirillum magneticum AMB-1]
 gi|82947416|dbj|BAE52280.1| Membrane-fusion protein; Multidrug resistance efflux pump
           [Magnetospirillum magneticum AMB-1]
          Length = 589

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 96/447 (21%), Positives = 183/447 (40%), Gaps = 64/447 (14%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W+ L R          ++S+  I   I W+ +  ++    + GEI+ E  V  I+    G
Sbjct: 174 WRPLAR---------AVMSLTAI--FIVWAFVAHLDEVAIAEGEIVPEGKVKVIQHLEGG 222

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI--KNLRCHIDT---EKSALDF- 119
           ++++    +GS++ +G PL+         L+DL   S+  + L+  +D    +++ L+  
Sbjct: 223 VVREIMATDGSEVKEGAPLI---------LLDLPVSSLNKEELQARMDGYILQRARLEAE 273

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           L++K  V  +    R+  L++   +      +  N  ++ +   ++ K        L   
Sbjct: 274 LHDKPVVFPEEEAKRQPGLVESERRSFEARRQALNATLTVLRDQVRQK-------GLEVQ 326

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           + E KS  +   L   Q+ L M  +L +    S+ D            ++++  + + K 
Sbjct: 327 EYETKSRSIATSLRLSQERLAMSTDLIKSGLASKMD-----------HVQIQAQVEDLKG 375

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTRE---QKT---- 291
            L  +      A          +S +L + QRT   EMS+  + + +TRE   Q T    
Sbjct: 376 QLDSVRASIPRAEAAQQEAKGRVSEELARFQRTAQSEMSEAELNIARTRELFIQATDQQR 435

Query: 292 ---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              I SPI G +   +S +     +   P+M+IVP  +   + AK+ P    +V+ G  A
Sbjct: 436 RTLISSPIDGIVKNMRSNTIGGVVRPGDPIMEIVPLHERLQVDAKLNPMDRGYVQTGQRA 495

Query: 349 TVRFPHYADIREKKFKA--IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TV+   Y            I+   D  + Q  N    Q YY V+++ TD A+  +    R
Sbjct: 496 TVKISAYDYTTYGGLDGDVILVAPDTTVPQTPN---AQPYYRVVVQ-TDRAYIGDETAKR 551

Query: 407 ---NGFPAEVLFTAKNTTLAQEIIHPI 430
               G  A V       ++ + ++ P+
Sbjct: 552 LISAGMQATVEIHTGTRSIMEFLVKPV 578


>gi|126737428|ref|ZP_01753163.1| putative type I secretion protein [Roseobacter sp. SK209-2-6]
 gi|126722013|gb|EBA18716.1| putative type I secretion protein [Roseobacter sp. SK209-2-6]
          Length = 391

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 82/421 (19%), Positives = 175/421 (41%), Gaps = 67/421 (15%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           R+  L    ++  + W+    ++  V   GE+++      +++   GI+ +  V  G ++
Sbjct: 19  RIIYLVGAALLIFLGWAAFASVDEIVRGEGEVVSSSRAQIVQNLEGGILAELYVRQGDEV 78

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE-KAFESREEQ 137
             G  L   +D +                      ++A D L ++ D LE K F  R E 
Sbjct: 79  EAGQVLAKLQDTKF---------------------RTAADELQDQIDALEIKQF--RLEA 115

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            +D  G Y    S       S +  S +  L+  +S + +R D   K      +L     
Sbjct: 116 EMD--GAYKFEVSPELAARSSEILASERALLSARQSDFTSRRDSARK------ILDQLND 167

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +L  M++L+++N V+  ++N+ ++    +  +               NE+  +  LE A 
Sbjct: 168 ELANMQSLYKQNIVALIEVNRAQKAATDAQAKY--------------NEIGTQTELELAE 213

Query: 258 YLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              E  R+L    Q+Q    D++ +            I SP++G +      +     + 
Sbjct: 214 EYSETLRELASLRQDQHLALDQLHR----------TVITSPMSGIVNSLAVTTIGGVIRP 263

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + + +I+P  +  ++ A+V PK I  V++G  AT++   Y       + +++ K+D + 
Sbjct: 264 GEEIFEIIPMGEELFVEARVNPKDIASVQRGQDATIKLSAY---DYTIYGSLMGKVDFVS 320

Query: 375 S---QQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           +   + + N + + YY+V +++   + ++   NIE+R G  A       + T+   ++ P
Sbjct: 321 ADTFEDERNPRAEPYYKVTVRVDRGSLTERQQNIEVRPGMRATAELQTGSKTVLNYLLKP 380

Query: 430 I 430
           +
Sbjct: 381 L 381


>gi|37524659|ref|NP_928003.1| membrane fusion protein PrtC [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784084|emb|CAE12953.1| Membrane Fusion Protein PrtC [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 444

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 83/427 (19%), Positives = 184/427 (43%), Gaps = 45/427 (10%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           +GI+G + W+ L P++  V+SSG ++ + N   +++P SGII + +V  G  +  G  L+
Sbjct: 34  VGILGFLIWAALAPLDKGVASSGVVVVDGNRKTVQAPASGIISQIKVVEGETVKAGQTLV 93

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY-----DVLEKAF-ESREEQLL 139
               ++    +D  +     L   + TE   L   +        D+L++   E R  +++
Sbjct: 94  QLSQVQAKAQVDALQ---DQLHTTLATEARLLAEQHGDEALIFPDLLQQLHSEPRVNEII 150

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +   +   +  +V    ++ + +S++    ++  ++S +LN+          R   ++ +
Sbjct: 151 ELQKQLFVSRREVLRSDLAGLEQSVEGIDFQIKGLKSSFLNK----------RMQQAALK 200

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF- 255
           + +T +K+L ++    +N   +    + +   EL  +I E +     + +   E      
Sbjct: 201 EQITNLKSLADEGYFPRNRYLE----LLREQAELNSSIAEMEGRAGQLEKQLQETQQRII 256

Query: 256 ---ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              A+Y +E+   L + Q + ++  +KL   +      +I++P+ GT+V    F+     
Sbjct: 257 QRKADYQREVRTQLAEVQVSASEYRNKLDTAQFELTHTSIVAPVDGTVVGLNIFTQGGVV 316

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK---AIIEK 369
              + LM+I+P  +   +  +V       + KG    + F  +   R  K +   A+I  
Sbjct: 317 APGEKLMEILPDQRAFEVETRVAVNLADKISKGLNVDLMFTAFNQNRTPKVEGKVAVISA 376

Query: 370 ---IDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
              +DP  S        Q YY++ + ++         +++R G P EV     + +L   
Sbjct: 377 DRLVDPATS--------QPYYQMRVVVSPEGMEKLKGLDIRPGMPVEVFVKTGSRSLLSY 428

Query: 426 IIHPITD 432
           +  P+ D
Sbjct: 429 LFKPLLD 435


>gi|307131041|ref|YP_003883057.1| Proteases secretion protein prtE [Dickeya dadantii 3937]
 gi|306528570|gb|ADM98500.1| Proteases secretion protein prtE [Dickeya dadantii 3937]
          Length = 448

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 86/456 (18%), Positives = 181/456 (39%), Gaps = 61/456 (13%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M     R+   +L+    L + G  G + W++L P++  V+  G ++   N   I+    
Sbjct: 17  MRDRASRDEERALRLGWWLVLAGFGGFLLWALLAPLDKGVAVQGNVVVSGNRKVIQHMQG 76

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ + QV++G ++  G  LLT       + +D +  S               + L ++Y
Sbjct: 77  GIVDRIQVKDGDRVAAGQVLLTL------NAVDARTTS---------------EGLGSQY 115

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYG------------------ISSVYRSLKM 166
           D L     +RE +LL    +  S+ +                        + S  +SLK+
Sbjct: 116 DQLI----AREARLLAEQ-RNQSSLAATPRLAQARQRPEMAAIIALQEDLLRSRQQSLKL 170

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKD-------LTMMKNLFEKNAVSQNDLNQQ 219
           ++  +R+       LE     L+ ++SS Q +       L  ++ L   N V +N + + 
Sbjct: 171 EIDGVRASIDG---LETSLGALQKVMSSKQSEQATLSQQLQGLRPLAADNYVPRNKMLET 227

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           ER+  + + EL +   E     R I +           Y KE++ +L   Q    + +S+
Sbjct: 228 ERLFAQVSGELAQTSGEVGRTRRDIQQQKLRIAQRQQEYDKEVNSELSDVQAKLNEVISQ 287

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
               +       + +P+AGT+V  + F+        Q +M IVP  +   +  ++  + +
Sbjct: 288 REKADFNLANVQVRAPVAGTVVDMKIFTEGGVIAPGQVMMDIVPEDQPLLVDGRIPVEMV 347

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIE--KIDPIISQQDNNLQTQEYYEVILKITDLA 397
             V  G    ++F  ++     +    +     D ++ ++D       YY + +++++  
Sbjct: 348 DKVWSGLPVELQFTAFSQSTTPRVPGTVTLLSADRLVDEKDGT----PYYGLRIQVSEEG 403

Query: 398 -FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
             S + +E++ G P +        +    +  P+ D
Sbjct: 404 KRSLHGLEIKPGMPVQGFVRTGERSFINYLFKPLMD 439


>gi|152986009|ref|YP_001349499.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           PA7]
 gi|150961167|gb|ABR83192.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           PA7]
          Length = 432

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 85/456 (18%), Positives = 171/456 (37%), Gaps = 61/456 (13%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +  KR+  A  +   LL + G  G + W+   P++  V+    ++       ++ P  
Sbjct: 1   MTRMAKRDENAYARMGWLLVLFGFGGALLWAAFAPLDQGVAVPATVIISGQRKSVQHPVG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++K   V +G ++  G PL+  E  +                      ++ +D L N+Y
Sbjct: 61  GVVKHILVRDGQRVEAGEPLIRLEPTQA---------------------QANVDSLVNQY 99

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM--KLTRMRSIYLN----- 177
            V  +  ++R +   D L              ++S+   L++  +L R R   L      
Sbjct: 100 -VNARLNQARLQAEYDGLHTLEMPTGLAGQAPVASLGERLELQRQLLRSRQTALGNELSA 158

Query: 178 -RLDLENKSSLLRALLSSHQ----------KDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
            R ++E   + L  L  + Q            L+  ++L E+  + +N L +QER     
Sbjct: 159 LRANIEGLRAQLEGLRQTEQNQRLQQRLLNSQLSGARDLAEEGYMPRNQLLEQER----Q 214

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQ---RTFADEMSK 279
             E+   + E       I +   EA +        Y KE+S  L + Q   RT  +E+S 
Sbjct: 215 LAEVNARLSESSGRFGQIRQSIAEAQMRIGQRQEEYRKEVSGQLAETQVNARTLWEELSS 274

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                   +   I +P+ G +   + F+        + LM IVP+S    +  ++    +
Sbjct: 275 ARY---ELQHAEIRAPVGGYVAGLKVFTEGGVIGPGELLMYIVPNSDSLEVEGQLAVNLV 331

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLA 397
             +  G    + F  +   +  +    +  +  D ++ +Q+     Q YY +  ++    
Sbjct: 332 DRIHSGLPVEMLFTAFNQSKTPRVTGEVTMVSADRLLDEQNK----QPYYALRAQVDAAG 387

Query: 398 FSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
                 +++R G   +V       +L   +  P+ D
Sbjct: 388 MGKLQGLQIRPGMAVQVFVRTGERSLLNYLFKPLLD 423


>gi|307320227|ref|ZP_07599646.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|306894106|gb|EFN24873.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
          Length = 496

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 85/447 (19%), Positives = 179/447 (40%), Gaps = 33/447 (7%)

Query: 2   HHFMWKNLKRN--HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEI 59
           H     NL  N   PA +    ++   GI G   W+ L  I+ +V + G I+ E +  E+
Sbjct: 62  HKPAQANLSGNWRKPARMGFGIVVLTFGIFG--GWASLASIDSAVVAQGTIVVETDRKEV 119

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSA 116
           +    GI++   V+  + + +G  L+  +  E     ++ + +  +L   +  +  E + 
Sbjct: 120 QHLAGGIVRDVLVKPNAHVTEGQVLVRLDSTEAQAQGEIARSATFSLIAEQARLQAEMNG 179

Query: 117 LDFLNNKYDVLEK-----AFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
            + +    ++        A  + E+Q+  FL +  +  + V   N  I+   + ++   +
Sbjct: 180 AEMVTFPRELTRASSGPLAKRAMEDQMRLFLKRRSARTNDVSILNERIAQSEQKIEAVQS 239

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +  ++   R+ +E+ +     L     K +     L E     + DL  Q          
Sbjct: 240 QREAV---RVQIESITEEYDKLAPLADKGIITATRLTELKR-QRADLQGQLGAFVADIAG 295

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            R  I E +  +  +               +E+S  L +     AD   KL + +    +
Sbjct: 296 ERHTISEARLQIEQVGR----------KVFEEVSAQLAETSAKLADAGEKLRVADDVLNR 345

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I +P +G ++  +  +     +  + LM+IVP      + AK++P  I +V +G  A 
Sbjct: 346 TEIRAPRSGRVIGFKVHTIGAVVRPGETLMEIVPDDDTLIVSAKMSPVDINNVGEGLPAE 405

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQ-DNNLQTQEYYEVILKITDLAFSDN-NIELRN 407
           +R P +   + +     I ++  + +    + +  Q YYE+ + +    F D    +LR 
Sbjct: 406 IRLPSF---KARSTPIAIGEVQSVAADALHDEVTRQPYYELKVSVQVSKFPDQVRAKLRP 462

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNW 434
           G PAEV+      ++   +  P+ D +
Sbjct: 463 GMPAEVIVATGERSVLSYLTQPLADAF 489


>gi|307942199|ref|ZP_07657550.1| type I secretion membrane fusion protein, HlyD family [Roseibium
           sp. TrichSKD4]
 gi|307774485|gb|EFO33695.1| type I secretion membrane fusion protein, HlyD family [Roseibium
           sp. TrichSKD4]
          Length = 429

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 104/450 (23%), Positives = 188/450 (41%), Gaps = 60/450 (13%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            LK++  + +   +LL++I   G+  W+    I  +V SSG ++ E N  +++    GI+
Sbjct: 8   GLKKSVRSHIVTASLLALIVAGGIGGWAANAEISGAVVSSGTVVVESNTKQVQHQEGGIV 67

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLID-----LKKVSIKNLRCHIDTEKSALDFLNN 122
           K+ +V+NG  +  G  L+  +D  T   +      L+++S + +R  +  E+  LD ++ 
Sbjct: 68  KEIRVQNGDTVKAGDLLIRLDDTVTRANLSVITKQLRELSAQEVR--LVAERDGLDRIDF 125

Query: 123 KYDVLEKAFESREEQLLD-----FLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIY 175
             DV     E  +  L++      +G+ +    ++  F+  I  +   LK K        
Sbjct: 126 GADVDVGPIEQGQVALMEARRESVVGRKNQIEEQIRQFDKQIEGLTAQLKAK-------- 177

Query: 176 LNRLDLENKSSLLRALLSSHQKDLT--MMKNLFEKNAVS----QNDLNQQERIVYKSTLE 229
               D+E K      LL     DL+  + KNL  K+ V+    +    Q E   + S + 
Sbjct: 178 ----DVEIK------LLDEELSDLSDLLAKNLVSKSRVTGLRRERARLQGEYGEFLSQIA 227

Query: 230 LREN-IHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQRTFA-DEMSKLTILEKT 286
             E  I E++  +  I + Y    LE    ++ EI+R   Q QR  A D+++++      
Sbjct: 228 RSEQAISERRVQILQIEDSYRAEVLEQLQQVRSEIAR--LQEQRIGAEDQLTRV------ 279

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                I +P  G +      +        + +M IVP      I  +V P  I  +  G 
Sbjct: 280 ----DIRAPQTGYVHQLAVHTIDGVIAPGETVMVIVPQEDQLLIETQVRPVDIDQLGTGQ 335

Query: 347 TATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNI 403
            ATVRFP +      + KA +  +  D I+ ++        YY   L I +   +     
Sbjct: 336 QATVRFPSFDQRTTPELKASLLTVSADLIMDERTGT----GYYTARLLIPEEELAKLGGK 391

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
            L  G P E     ++ T+   ++ P+TD 
Sbjct: 392 ALIPGMPVEAFMKTQDRTVLSYLVKPVTDQ 421


>gi|271500591|ref|YP_003333616.1| type I secretion membrane fusion protein, HlyD family [Dickeya
           dadantii Ech586]
 gi|270344146|gb|ACZ76911.1| type I secretion membrane fusion protein, HlyD family [Dickeya
           dadantii Ech586]
          Length = 448

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 87/457 (19%), Positives = 186/457 (40%), Gaps = 63/457 (13%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M     R+   +L+    L  +G  G + W++L P++  V+  G ++   N   I+    
Sbjct: 17  MRDRASRDEKRALRLGWWLVFVGFGGFLLWALLAPLDKGVAVQGNVVVSGNRKVIQHMQG 76

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+++ QV+ G ++  G  LLT       + +D +  S               + L ++Y
Sbjct: 77  GIVERIQVKEGDRVAAGQVLLTL------NAVDARTTS---------------EGLGSQY 115

Query: 125 DVL-----EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-- 177
           D L         E R +  L    +      +    GI ++  +L    +R +++ L   
Sbjct: 116 DQLIAREARLLAEQRNQPSLVATPRLVEARQRPEMAGIIALQENLL--YSRQQALKLETE 173

Query: 178 --RLDLENKSSLLRAL---LSSHQKD-------LTMMKNLFEKNAVSQNDLNQQERIVYK 225
             R  +E   + L AL   ++S Q +       L  ++ L  +N V +N + + ER+  +
Sbjct: 174 GVRASIEGMETSLGALQKVITSKQSEQAVLSQQLQGLRPLAAENYVPRNKMLEMERLFAQ 233

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
            + EL +   +   + R I +      L  A   +E  R++       +D  SKL  +  
Sbjct: 234 VSGELAQTGGDAGRIRRDIQQ----QKLRIAQRQQEYDREVSSE---LSDVQSKLNEVIS 286

Query: 286 TREQK-------TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            RE+         + +P+AGT+V  + F+        Q +M+IVP  +   +  ++  + 
Sbjct: 287 QREKADFNLANVQVRAPVAGTVVDMKVFTEGGVIAAGQVMMEIVPEDQPLLVDGRIPVEM 346

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDL 396
           +  V  G    ++F  ++     +    +  +  D ++ ++D       YY + +++++ 
Sbjct: 347 VDKVWAGLPVELQFTAFSQSTTPRVPGTVTLLSADRLVDEKDG----MPYYSLRIQVSEE 402

Query: 397 A-FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
              + + +E++ G P +        +    +  P+ D
Sbjct: 403 GKRTLHGLEIKPGMPVQGFVRTGERSFINYLFKPLMD 439


>gi|83952300|ref|ZP_00961032.1| putative transport protein [Roseovarius nubinhibens ISM]
 gi|83837306|gb|EAP76603.1| putative transport protein [Roseovarius nubinhibens ISM]
          Length = 442

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 91/445 (20%), Positives = 179/445 (40%), Gaps = 61/445 (13%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL+  G  GL  W+   P+  +V S G  +   +   ++    GIIK+  +E G  +  G
Sbjct: 28  LLTTFGGFGL--WAFTAPLAAAVISQGSFVATGSNKIVQHLEGGIIKEILIEEGDNVTAG 85

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK----YDVLEKAFESREEQ 137
            PLL  +  ET+ L   +++ ++ +R     E   L   N K    Y    +A  S    
Sbjct: 86  QPLLRLD--ETSALATERELFLRQIRLE-AMEARILAEYNQKETLTYPAHLEALRS---- 138

Query: 138 LLDF-LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             DF +         VFN  +  +   +K+    + ++ +  +  + +    RA  +   
Sbjct: 139 --DFNIAAMLDGQRVVFNVALQQMKNDVKLLQQNIEALTVRAVGYQQQLISSRAQHAILL 196

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +D    + L ++  + +++ N            LR  I E +  +  +    DE      
Sbjct: 197 EDSNAKQTLLDQGLIRRSEFNA-----------LRRAIAEIEGQIGRLIAEVDEITEVKR 245

Query: 257 NYLKEISRDLEQNQRTFADEMSKL-TILEKTREQKT----------ILSPIAGTIVYNQS 305
            Y  +I++ + + +    DE+  + + LE  REQ            +++P+AGT+V    
Sbjct: 246 RYEAQIAQAVSERRGAALDELQVVQSELESVREQARTAENVLRRAEVVAPVAGTVVRLHY 305

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + + +I+P  +   I  ++   +I  VKKG  ATVR             A
Sbjct: 306 HTPGGVIESGKAIAEILPTGEPLIIEVQIPRVEIDVVKKGQPATVR-----------LTA 354

Query: 366 IIEKIDPIISQQ------DNNLQTQEYYEVILKITDLAFSDNNIELRNGF------PAEV 413
           + ++I PI+  +      D  L   +     + +  ++     ++   GF      PAE+
Sbjct: 355 LNQRITPILMGEVFYVSADAILDRSQEKPREIYVARVSVPPAELDRVRGFTPTPGMPAEI 414

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIF 438
           +   +  T  Q ++ P+TD+  + F
Sbjct: 415 MIQTEERTFVQYLMKPVTDSMTRAF 439


>gi|91205637|ref|YP_537992.1| alkaline protease secretion protein AprE [Rickettsia bellii
           RML369-C]
 gi|91069181|gb|ABE04903.1| Alkaline protease secretion protein AprE [Rickettsia bellii
           RML369-C]
          Length = 510

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 172/440 (39%), Gaps = 17/440 (3%)

Query: 11  RNHPASLKRMTLL-SIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           RN+ A   R  +L  I  II L+     W  + P++    + G ++   N   I+    G
Sbjct: 73  RNNVAQAARSPILFGIYVIIFLVLIGGVWMAVAPLDSGAVAVGILMPSTNKKTIQHHEGG 132

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           II    V+ G ++  G  L+   ++E T +    + ++   R  + TE   +   +N   
Sbjct: 133 IINAIYVKQGDKVKAGDKLI---ELEETRIKSEHESTLSQYRTALATENRLIAERDNLEQ 189

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENK 184
           +    F  ++  L +     H T   +F      V+ S K  L +  S    R++ LE K
Sbjct: 190 IEFSDFLMQDINLPEVAKIIH-TQENLFR-SRKEVFNSEKDALQQRISQLEKRVEGLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  +K L EK  V +  L +QE  V  +  ++     E       I
Sbjct: 248 KVAATKTAEVYQDRLKALKTLKEKGFVQKAALLEQEAKVASAKSDVATTDTEIAGTHHSI 307

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E       +   Y +    +L + Q   A    K   L  +  +  I SP+ G I   +
Sbjct: 308 TEAQISIITQQNKYTERTLTELREAQVQAASLREKYNSLTDSLNRIIIKSPVDGIINNLK 367

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +   Y    QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F 
Sbjct: 368 YHTIGGYIGHGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFT 427

Query: 365 AIIEKIDPIISQQDNNLQTQE--YYEVILKITDLAFSD----NNIELRNGFPAEVLFTAK 418
             +  + P I Q +     Q+  YY   ++I    F+      N+EL  G  AEV     
Sbjct: 428 GKVVSVSPDIVQDERQHPGQQDNYYVARVEIDMDEFNRIAKIKNLELHPGMQAEVQIVTG 487

Query: 419 NTTLAQEIIHPITDNWPKIF 438
             TL + ++ P+ D   K F
Sbjct: 488 TRTLLRYLLDPVIDTAFKAF 507


>gi|28395577|gb|AAO39141.1| putative type I secretion protein [Photorhabdus luminescens]
          Length = 442

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 90/434 (20%), Positives = 193/434 (44%), Gaps = 44/434 (10%)

Query: 19  RMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+  L I +GI+G + W+ L P++  V+SSG ++ + N   +++P SGII + +V  G  
Sbjct: 24  RLGWLVIGVGILGFLIWAALAPLDKGVASSGVVVVDGNRKTVQAPASGIISQIKVVEGET 83

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKN-LRCHIDTEKSAL-----DFLNNKYDVLEK-A 130
           I  G  L+    ++    +D    +I++ L   + TE   L     D +    D+L++  
Sbjct: 84  IKAGQTLVQLSQVQAKAQVD----AIQDQLYTTLATEARLLAEQHGDEVLIFPDILQQLQ 139

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL-- 188
            E R  ++ +   +   +  +V    +  + +S++    +++ +         KSSLL  
Sbjct: 140 SEPRVNEITELQKQLFKSRREVLRSDLEGLEQSVEGINFQIKGL---------KSSLLSK 190

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           R    + ++ +T +K+L ++    +N   +L +++  +  ST E+     + +  L+   
Sbjct: 191 RMQQGALKEQITNLKSLADEGYFPRNRYLELLREQAELNSSTAEMAGRAGQLEKQLQETQ 250

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +   +     A+Y +E+   L + Q + ++  +KL   +      +I++P+ GT+V    
Sbjct: 251 QRIIQRK---ADYQREVRTQLAEVQVSASEYRNKLDTAQFELTHTSIVAPVDGTVVGLNV 307

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           F+        + LM+I+P      + A+V       + KG+   + F  +   R  K + 
Sbjct: 308 FTQGGVVAPGEKLMEILPTQVALEVDARVAVNLADKISKGFDVDLMFTAFNQNRTPKVEG 367

Query: 366 IIEK------IDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
            +        +DP+ S        Q YY++ + ++         +++R G P EV     
Sbjct: 368 KVAMVSADRLVDPVTS--------QPYYQMKVVVSPEGMEKLKGLDIRPGMPVEVFVKTG 419

Query: 419 NTTLAQEIIHPITD 432
           + +L   +  P+ D
Sbjct: 420 SRSLLSYLFKPLWD 433


>gi|298291985|ref|YP_003693924.1| type I secretion membrane fusion protein, HlyD family [Starkeya
           novella DSM 506]
 gi|296928496|gb|ADH89305.1| type I secretion membrane fusion protein, HlyD family [Starkeya
           novella DSM 506]
          Length = 456

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 81/435 (18%), Positives = 179/435 (41%), Gaps = 44/435 (10%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P  +  + +++ +G  G + W  L P+     ++G I  + +   ++    GII   +V+
Sbjct: 35  PKLMGGVLIVTFLG--GFLAWGALAPLAGGAVAAGVISPDGSRRVVQHLEGGIIASLEVK 92

Query: 74  NGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +G ++  G  L+  E ++    +     +  ++  +R  +  E+     +    +++   
Sbjct: 93  DGDRVTAGQTLVRLESVQPDTAMRGQLHRYRTLLAMRARLTAEQEGRAEIEFPPELMATG 152

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--------LE 182
                + +LD               G  +++ + +    R R I   R++        LE
Sbjct: 153 TSDELKSVLD---------------GQRTMFETRRTSDRRQREILKRRIEQSQHQIKALE 197

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +++     L    ++L   + L +K  + ++++   ER   ++ +E R    E   M+ 
Sbjct: 198 AQAASTSQQLELIAEELKGKRYLLQKELIRKSEVLSLER--ARAEIEGRRG--EYLGMIS 253

Query: 243 HINELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
              +   E  ++     A    E+S  +++ +   AD   KL +      + TI +PI G
Sbjct: 254 RAEQQIGETEVQLLALDAERQDEVSEQMDKVRVELADVTEKLQLTRDVLARTTIAAPING 313

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T+V  +  +     +   P++ IVP  +   I A+++P  +  V  G  A V    ++  
Sbjct: 314 TVVNLRFKTLGGVIKAGDPILDIVPIEETLLIEARISPVDVDVVHPGLPAQVHLTAFSRW 373

Query: 359 REKKFKAIIEKI--DPIISQQDNNLQTQEYY--EVILKITDLAFSDNNIELRNGFPAEVL 414
              +    ++ +  D ++ Q       Q YY  +V +  ++L   ++ IEL+ G PAEVL
Sbjct: 374 ELPRIDGFVKSVSADAMVDQTTG----QTYYLAKVEVDPSELEQFNDLIELQAGMPAEVL 429

Query: 415 FTAKNTTLAQEIIHP 429
             ++  T    +  P
Sbjct: 430 IVSRERTFLDYLAEP 444


>gi|71735575|ref|YP_273253.1| HlyD family secretion protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71556128|gb|AAZ35339.1| HlyD family secretion protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 440

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 90/438 (20%), Positives = 181/438 (41%), Gaps = 41/438 (9%)

Query: 16  SLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            ++R+ +  ++   GL  TW+ L P+  +V  SG ++ +     ++    GI+K+    +
Sbjct: 22  GIRRVGVAIVLVTFGLFGTWAALAPLGNAVYGSGVVMVQSYRKTVQHLEGGIVKELLARD 81

Query: 75  GSQILQGTPLLTFEDIE-------TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           G  + +  PL+  +D +       T + +   +     LR   D E S++  L       
Sbjct: 82  GDTVHKDDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERD-ELSSIPPLTISGTDS 140

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS----LKMKLTRMRSIYLNRLDLEN 183
           ++A E+ E +   F  + +S  +++      SV R     LK ++  +R +   ++ LE 
Sbjct: 141 QRAREAIEGEEQVFRTRKNSRQTEI------SVQRERIGQLKQQIIGLRDMIRTKVSLEK 194

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                     S+  ++T +K+L  +  V +  L +QER +      L+  + + ++ +  
Sbjct: 195 ----------SYSSEITELKDLLSQGFVDKQRLLEQERKLDM----LKSEVADLESTITK 240

Query: 244 INELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                 E  L+      N+  E++++L   Q    D     T L+    +  I +P  G 
Sbjct: 241 TQLQISETELQIIQLNKNFSSEVAKELSDVQAKVFDLQETATALQDRLSRVVIRAPEDGM 300

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           ++  +  +         PL+ IVP S    + A V    I  +  G    V F  +    
Sbjct: 301 VLDMKVHTVGGVVSAGTPLLDIVPESSELVVEAHVAINDIDRISIGKLTDVHFSAFNSAT 360

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
               + ++ +I     + D     + YY V +K+T+       + +L+ G PAEVL  A 
Sbjct: 361 TPVIEGVVTRISADRLKDDAG---EPYYLVRVKLTEKGLKRLGDRKLQPGMPAEVLINAG 417

Query: 419 NTTLAQEIIHPITDNWPK 436
             T+ Q ++ P +  + K
Sbjct: 418 ERTMLQYLMKPASSVFIK 435


>gi|131070|sp|P23597|PRTE_ERWCH RecName: Full=Proteases secretion protein prtE
 gi|41549|emb|CAA37343.1| prtE [Erwinia chrysanthemi]
 gi|148485|gb|AAA63635.1| prtE [Erwinia chrysanthemi]
          Length = 448

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 85/451 (18%), Positives = 177/451 (39%), Gaps = 51/451 (11%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M     R+   +L+    L + G  G + W++L P++  V+  G ++   N   I+    
Sbjct: 17  MRDRASRDEERALRLGWWLVLAGFGGFLLWALLAPLDKGVAVQGNVVVSGNRKVIQHMQG 76

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ + QV++G ++  G  LLT       + +D +  S               + L ++Y
Sbjct: 77  GIVDRIQVKDGDRVAAGQVLLTL------NAVDARTTS---------------EGLGSQY 115

Query: 125 DVL-----EKAFESREEQLLDFLGKYHSTCSKVFNYGI--------SSVYRSLKMKLTRM 171
           D L         E R +  L    +      +     I         S  +SLK+++  +
Sbjct: 116 DQLIAREARLLAEQRNQSSLAATPRLTQARQRPEMAAIIALQEDLLRSRQQSLKLEIDGV 175

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKD-------LTMMKNLFEKNAVSQNDLNQQERIVY 224
           R+       LE     L+ ++SS Q +       L  ++ L   N V +N + + ER+  
Sbjct: 176 RASIDG---LETSLGALQKVMSSKQSEQATLSQQLQGLRPLAADNYVPRNKMLETERLFA 232

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           + + EL +   E     R I +           Y KE++ +L   Q    + +S+    +
Sbjct: 233 QVSGELAQTSGEVGRTRRDIQQQKLRIAQRQQEYDKEVNSELSDVQAKLNEVISQREKAD 292

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
                  + +P+AGT+V  + F+        Q +M IVP  +   +  ++  + +  V  
Sbjct: 293 FNLANVQVRAPVAGTVVDMKIFTEGGVIAPGQVMMDIVPEDQPLLVDGRIPVEMVDKVWS 352

Query: 345 GYTATVRFPHYADIREKKFKAIIE--KIDPIISQQDNNLQTQEYYEVILKITDLA-FSDN 401
           G    ++F  ++     +    +     D ++ ++D       YY + +++++    S +
Sbjct: 353 GLPVELQFTAFSQSTTPRVPGTVTLLSADRLVDEKDGT----PYYGLRIQVSEEGKRSLH 408

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            +E++ G P +        +    +  P+ D
Sbjct: 409 GLEIKPGMPVQGFVRTGERSFINYLFKPLMD 439


>gi|85705070|ref|ZP_01036170.1| type I secretion membrane fusion protein, HlyD family protein
           [Roseovarius sp. 217]
 gi|85670392|gb|EAQ25253.1| type I secretion membrane fusion protein, HlyD family protein
           [Roseovarius sp. 217]
          Length = 435

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 96/458 (20%), Positives = 192/458 (41%), Gaps = 84/458 (18%)

Query: 25  IIGIIGLI-------TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           I+G+IGLI       TW++   I  ++ + G I  + N   ++ P  G++   +V+ G +
Sbjct: 16  IVGLIGLILLVGGFGTWAVFTQISGAIIAPGRIEVDQNRQVVQHPDGGVVSAIEVKEGDR 75

Query: 78  ILQGTPLLTFE--DIETT-DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL------- 127
           +  G  L+  +  D+++   +I+ +   +   R  ++ E+   D L  K+D L       
Sbjct: 76  VSAGQVLVRLDPTDLQSELSIIENQLAELMARRGRLEAERDGRDTL--KFDPLLIEISAQ 133

Query: 128 -----------EKAFESREEQLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSI 174
                      +  F++R + ++  + + H    ++ N   GI +   +L       R +
Sbjct: 134 NRDANDLMAGQKTLFDARAQTVVAEIDQLHKRRGQITNQIDGIDAQQVALS------RQL 187

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTM----------MKNLFEKNAVSQNDLNQQERIVY 224
            L  L+L ++ SLL   L+   + L +          M +L  + A ++  + + E  + 
Sbjct: 188 DLIELELTDQQSLLDRGLAQASRVLNLQREQARLSGTMGDLAAQKAEAEGRITEIEITIL 247

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           K   + RE   E    LR         +L+F    +E+  +L + +R   ++M +L I  
Sbjct: 248 KLGTDRRE---EAITTLR---------DLQF----REL--ELREQRRALIEQMGRLDIP- 288

Query: 285 KTREQKTILSPIAGTIVYN-QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
                    SP++G +VYN Q F+  +  + + P++ IVP  +   I A+V    +  + 
Sbjct: 289 ---------SPVSG-VVYNLQVFALRSVIRPADPVLFIVPQDRPLVINARVDSIHVDKLF 338

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY---EVILKITDLAFSD 400
            G   T+RF   + + ++    +  ++  I +    +  T+  Y   E++L   + A   
Sbjct: 339 VGQEVTLRF---SALDQRTTPELFGRVTQISADAFEDEATRASYYRAEIVLSEGEQARLP 395

Query: 401 NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               L  G P E      + T    ++ P TD   K F
Sbjct: 396 EGTALIPGMPVEAFIRTADRTPIAYLVKPFTDYLAKAF 433


>gi|323495796|ref|ZP_08100866.1| ABC transporter: Membrane fusion protein [Vibrio sinaloensis DSM
           21326]
 gi|323319263|gb|EGA72204.1| ABC transporter: Membrane fusion protein [Vibrio sinaloensis DSM
           21326]
          Length = 437

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 90/442 (20%), Positives = 176/442 (39%), Gaps = 50/442 (11%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +N   SL  +T    + +   +TWS++  ++    + G ++ E     ++S   G +K+ 
Sbjct: 19  KNTARSLMMVTWSVALCVAIFVTWSVVTQVDEIAKAKGAVIPEGEKQVLQSDIGGKLKRI 78

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V+ G  + +G PL+ F+          ++ +++ L     T + +++ +N   D  E  
Sbjct: 79  LVKEGQFVEKGQPLVEFD-------ATFQQTALEELTAQQVTLRMSIERMNALLDNREPN 131

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           F   E +  D + +  +  +              +  L   + I L + D E  +  LRA
Sbjct: 132 FGEFEIEFPDIVSQQKAQLNA-------------QKGLFYQKRIVLEK-DSEQIAEQLRA 177

Query: 191 L---LSSHQKDLTMMK---NLFEKNAVSQNDLNQQERIVYKSTLELREN-------IHEQ 237
           +   L S+ K+L   K   N+ EK   + N       I     LE+R+        I E 
Sbjct: 178 VEKSLPSYDKELNATKLELNILEKGYKAGN-------ISRLRVLEMRQKLASIEQKIEEA 230

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK----TIL 293
           +     + +  D    +    L E    +  ++     ++S L    ++ + K     ++
Sbjct: 231 RGKKSVLIKQADSNEQKIEQLLAEAKAKVSDDRSKAVSDLSALNARVRSSQAKLTNTMLV 290

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ G +    S  +    Q    +++IVP       +A+++P+ I  V  G    ++  
Sbjct: 291 SPLQGLVQSLPSTQNGGVIQPGGTVVEIVPVGGKADFKARLSPRDIGFVNVGQPTRIKID 350

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPA 411
            +   R    K  +E I P  SQ +     + YYEV++ +    F DN  +  +  G   
Sbjct: 351 AFDYSRFGALKGEVESISPTTSQSERG---EIYYEVVVSVETPYFRDNPESFSILPGMTG 407

Query: 412 EVLFTAKNTTLAQEIIHPITDN 433
           EV  T    ++ Q +  PI  N
Sbjct: 408 EVDITTGEKSVFQYLWKPIYTN 429


>gi|50120470|ref|YP_049637.1| HlyD family secretion protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49610996|emb|CAG74441.1| HlyD family secretion protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 452

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 85/431 (19%), Positives = 174/431 (40%), Gaps = 37/431 (8%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           LK    L ++G  GL+ W+ + P++  V+ SG ++  DN   ++   SG I    V +G 
Sbjct: 35  LKHGLWLVLVGFGGLLLWAGMAPLDKGVAVSGRVVVADNRKAVQPVSSGRIASLTVRDGD 94

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESRE 135
           ++  G  L T + I      D       NL   + +        L  + D+    F +  
Sbjct: 95  RVQAGQILATLDQIPAQAQRD-------NLATQLQEAHAGEARLLAERDDLSTILFPAAI 147

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSS 194
           E         +ST ++        ++ S +  L + R+ +    +  + +S   +ALL+S
Sbjct: 148 EP--------YSTVTQQIQIAQQQLFISRRAALQQERAAMQAAIIGAKAQSQGSQALLAS 199

Query: 195 HQ-------KDLTMMKNLFEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            Q       + L  ++ L ++  +++N   D+ +Q   +  +  + R N  + +  +  +
Sbjct: 200 SQTQFQIVNEQLRGLRPLAQEGYIARNRLLDVERQAAQLAGAIAQERNNQVQLQQQVVEL 259

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +   ++  E   Y K++   L   QR+  D   +L   E   +   I +P +GT+V   
Sbjct: 260 EQRIQQSQNE---YQKDVRAQLADTQRSIQDLTQRLKTAEYELQHTHIRAPASGTVVGLA 316

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q LM+IVP  +   I A++  + +  V  G    + F  +      +  
Sbjct: 317 LHTEGGVVNSGQMLMEIVPDGQPLLIDAQLPIELVDRVNNGLPVELLFSAFNQSTTPRIS 376

Query: 365 AIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
            ++  I  D ++ QQ      + YY + + + +        +++R G P E        +
Sbjct: 377 GVVALIGADQLVEQQTG----KPYYALRIHVDEQGKQQLAGLDVRPGMPVEAFIRTGERS 432

Query: 422 LAQEIIHPITD 432
           L   +  P++D
Sbjct: 433 LLNYLFKPLSD 443


>gi|330967430|gb|EGH67690.1| HlyD family secretion protein [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 440

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 91/432 (21%), Positives = 180/432 (41%), Gaps = 43/432 (9%)

Query: 16  SLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            ++R+ +  ++   GL  TW+ L P+  +V  +G ++ +     ++    GI+K+    +
Sbjct: 22  GIRRIGVAIVLVTFGLFGTWAALAPLGNAVYGTGVVMVQSYRKTVQHLEGGIVKELLARD 81

Query: 75  GSQILQGTPLLTFED------IETT--DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           G  + +  PL+  +D       E+T   LI  +    + LR   D E  A+  L      
Sbjct: 82  GDTVHKDDPLIVLDDSQLRSQFESTRNQLISTQAREAR-LRAERD-ELPAIPPLTISGTD 139

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS----LKMKLTRMRSIYLNRLDLE 182
            ++A E+ E +   F  + +S  +++      SV R     LK ++  +R +   ++ LE
Sbjct: 140 SQRAKEAIEGEEQVFRTRKNSRLTEI------SVQRERIGQLKQQIIGLRDMIRTKVSLE 193

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                      S+  ++T +K+L  +  V +  L +QER +      L+  + + ++ + 
Sbjct: 194 K----------SYSSEITELKDLLSQGFVDKQRLLEQERKLDM----LKSEVSDHESTIT 239

Query: 243 HINELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                  E  L+      N+  E++++L   Q    D     + LE    +  I +P  G
Sbjct: 240 KTQLQISETELQIIQLNKNFSSEVAKELSDVQAKVFDLQETASALEDRLSRIVIRAPEDG 299

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +  +         PL+ IVP S    + A V    I  +  G    V F  +   
Sbjct: 300 MVLDMKVHTIGGVVGPGTPLLDIVPESSELVVEAHVAINDIDRISIGKLTDVHFSAFNSA 359

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
                + I+ +I    + +  +   + YY V +K+T+       + +L+ G PAEVL  A
Sbjct: 360 TTPVIEGIVTRIS---ADRLKDEAGEPYYLVRVKLTEKGLKRLGDRKLQPGMPAEVLINA 416

Query: 418 KNTTLAQEIIHP 429
              T+ Q ++ P
Sbjct: 417 GERTMLQYLLKP 428


>gi|75907412|ref|YP_321708.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75701137|gb|ABA20813.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 523

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 91/389 (23%), Positives = 178/389 (45%), Gaps = 50/389 (12%)

Query: 19  RMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R  +L++IG+  + I W+    IE  V ++G++  E  V E+++P +G++++  V+NG  
Sbjct: 58  RTIMLTLIGLACVGIGWAYFAKIEQVVPATGQLKPEGTVKEVQAPVNGVVREVFVKNGET 117

Query: 78  ILQGTPLLTFEDIET-TDLIDLKKV---------SIKNLRCHIDTEKSALDFLNNKYDVL 127
           + +G  LLTF+ + T   L  L+KV         + + L        S L+F+ ++    
Sbjct: 118 VNKGDLLLTFDQVTTVAQLNSLEKVRRALTQENQTYRRLMRSTGGIASELEFVRSRLP-Q 176

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGI---SSVYRSLKMKLTRMRS------IYLNR 178
           E AF  R    L    +   T       GI   S   + LK+  T + S      + +++
Sbjct: 177 EAAFLLRNRAALVAENELLRTQLNNATTGIGLDSDEQKQLKVAKTELESRAAAAGLEVSK 236

Query: 179 LDLENKSSLLR-----ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           ++ +   + ++     + L+  Q+ L  +K L E+  +SQ     Q++ V  +  E+ + 
Sbjct: 237 IERQLTQTTVKLQDTQSSLAIQQQILDKIKILAEEGGISQLQYLNQQQQVQTTAAEVAQL 296

Query: 234 IHEQKNMLRHINELYDEANLEFA----NYLKEIS--------------RDLEQNQRTFAD 275
           + EQK +   I +   +     A    N L++I+              R +  N+R  AD
Sbjct: 297 VEEQKRLQFDIEKNQQQVTNTVATTDKNILEKIADNKKRIAEIDSQFMRIVLDNERNLAD 356

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             S+++  ++  + + + +P+AGT+   ++ ++   A  +Q L++IVP+         +T
Sbjct: 357 ITSRISQAQQELKYQELRAPVAGTVFDLKANNTGFVANPTQKLLQIVPNENF-IAEVFIT 415

Query: 336 PKQIQHVKKGYTATVR-----FPHYADIR 359
            K I  V+KG    VR     F  + DI+
Sbjct: 416 NKDIGFVRKGMKVDVRIDSFPFSQFGDIK 444


>gi|110679022|ref|YP_682029.1| HlyD family type I secretion membrane fusion protein [Roseobacter
           denitrificans OCh 114]
 gi|109455138|gb|ABG31343.1| type I secretion membrane fusion protein, HlyD family, putative
           [Roseobacter denitrificans OCh 114]
          Length = 437

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 149/358 (41%), Gaps = 24/358 (6%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           WK      P  +    LL ++G+IG+  W++   I  +V +SG I  E N   ++ P  G
Sbjct: 11  WKA---TGPLMVGMTALLILVGVIGV--WAVQARIAGAVIASGNIEVESNRQVLQHPQGG 65

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           ++    V++G  +  G  +L F+D +      +I+ +   I   +  +  E+  LD L  
Sbjct: 66  VVGALPVQDGDFVNAGDTVLRFDDTQLRSELAIIEGQLFEILARKARLKAERDGLDALPL 125

Query: 123 KYDVLEKAFESREEQ-LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
             ++ E A +    Q L+D   +     +         +   +     ++         L
Sbjct: 126 SEELAELAEKDPSVQALIDGQAQLFEARATSLQQSSEQILEQIAQAENQIEGATAQLAAL 185

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E +  L+ A       +LT  + LF+K     + ++  +R   +   E+         + 
Sbjct: 186 ETQRGLIEA-------ELTDSQTLFDKGLAPASRVSSLQREQARLLGEIGSITASVAQLR 238

Query: 242 RHINELYDEANLEFANYLKE--IS--RDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             I  L  E  +     L+E  IS  RDL+  +        +L+ +E T  +  + +P++
Sbjct: 239 GEIASLSIE-RIALTTRLREEAISTLRDLQFQEVELVQR--RLSTME-TLSRMELRAPVS 294

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           G I  ++ F+  +    ++P+M I+P  +   + A+V P  I  V  G  AT+RF  +
Sbjct: 295 GVIYGSRIFALQSVVSPAEPIMYIIPQDQPMVVAARVDPIHIDQVHVGQEATLRFAAF 352


>gi|288939994|ref|YP_003442234.1| type I secretion membrane fusion protein, HlyD family
           [Allochromatium vinosum DSM 180]
 gi|288895366|gb|ADC61202.1| type I secretion membrane fusion protein, HlyD family
           [Allochromatium vinosum DSM 180]
          Length = 438

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/423 (19%), Positives = 174/423 (41%), Gaps = 39/423 (9%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           +W+ L PI  +  +SG +  E     ++    G++ +  V  G ++ +G  L+  +D E 
Sbjct: 35  SWAFLAPINGAAVASGVVAVESARKIVRHLDGGVVSEILVREGDRVEEGEVLVRLDDTEA 94

Query: 93  TDLIDLKK---VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +  +++ +   ++++     +  E+  L  +    +++    + R  + +          
Sbjct: 95  SARLEIARGQYLALRAQEARLIAERDGLTQIPFADELIAAQGDMRIAEAI---------- 144

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSS-------HQKDLTM 201
                 G   V+ + +  L   + +   R D L+ +   L AL+++       +Q+++  
Sbjct: 145 -----TGEQRVFLARRQSLDGEKEVLDQRRDQLQEQIRGLEALIATKTKRIGLYQEEIDG 199

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN---- 257
           + NLF+K    +  L + ER+   + LE     H        I     E  ++ A     
Sbjct: 200 LLNLFDKGLGDKRTLREYERL--SAELEGERAQHRSDIAAARIQ--IGETEIQIAQLKRK 255

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  E+  +L   +   AD   ++  L KT E+  I SP AG IV +   +     +    
Sbjct: 256 FTSEVVTELRDVETQLADLRERMRALGKTLERTVIRSPAAGAIVGSSVHTIGGVIRPGDH 315

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++ +VP  +   I A+V P  +  V  G  A +R   +     +    +  ++  I + +
Sbjct: 316 ILDVVPEDESLIIEARVQPIDVDRVSPGLEADLRMSAF---NTRTTPVVQGRVLTISADR 372

Query: 378 DNNLQTQEYYEVI-LKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             +  T++YY +  +++TD   +    + L+ G P E +      T    ++ P TD+  
Sbjct: 373 LLDESTRQYYYLARIQVTDDGMAKLKGLTLQAGMPVEAMIKTGERTFIDYLVRPFTDSLA 432

Query: 436 KIF 438
           K F
Sbjct: 433 KAF 435


>gi|254512426|ref|ZP_05124493.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
 gi|221536137|gb|EEE39125.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
          Length = 446

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 97/466 (20%), Positives = 179/466 (38%), Gaps = 81/466 (17%)

Query: 14  PASLKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           P S+ R  ++ ++ +I    G   WS   P+  +V + G  +       ++    GII+ 
Sbjct: 18  PRSITRFIVIGLVMLIVCFGGFGVWSFRAPLAAAVIAQGSFVATGRNKIVQHLEGGIIEN 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V  G  +  G  ++T +  +T+   + +++ I+ +R    TE+   +    +  V   
Sbjct: 78  ILVTEGEAVQAGQIMMTLD--QTSAEANERELFIRKIRLQAMTERLLAEHSEQETLVFSP 135

Query: 130 AFESREEQ-----LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           A     +      +LD          K     I+ + R+++    R        + +E +
Sbjct: 136 ALIDASDDVEVMTILDNQKLSFDVSRKTLLNDIALLQRNMEALRIRATGFDAQLISMERR 195

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNML 241
           S +L       Q++      LFEK  V + DLN   R+  ++  +L   R    E   ML
Sbjct: 196 SDIL-------QEEYDTKFALFEKGLVRKGDLNTIRRVQAEAEGQLARLRAETAEVNQML 248

Query: 242 RHINE-------LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL- 293
               E        Y EA L   + L  I  DLE             ++ EK R+ +++L 
Sbjct: 249 LKYEEQILRTRSAYREAAL---DELGVIEADLE-------------SVREKARQARSVLD 292

Query: 294 -----SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
                +P+ GT+V     +     +  + + +I+P +    I A++   +I  V  G  A
Sbjct: 293 RAVVRAPVTGTVVRLHHHTPGGVIETGEQIAEILPANAPLIIEAQIPRTEIDSVVTGQMA 352

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQ-----------QDNNLQTQEYYEVILKITDLA 397
           TVR             A+ ++  P++             +D+    QE Y   + +T   
Sbjct: 353 TVR-----------LVALNQRTTPVLEGEVFYVSADSLVEDSAGMPQEVYLARISLT--- 398

Query: 398 FSDNNIELRN-----GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            SD    +R      G PAE++   +  T A  I  P+ D+  + F
Sbjct: 399 -SDEMNRVRGFVPTPGMPAEIMIQTEERTFAAYIAKPVVDSMSRAF 443


>gi|452929|gb|AAB28773.1| protease SM transporter [Serratia marcescens]
 gi|560501|emb|CAA57067.1| hasE [Serratia marcescens]
          Length = 437

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 85/436 (19%), Positives = 173/436 (39%), Gaps = 63/436 (14%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L ++G  G + W +L P++  V  SG ++   N   ++ P  G++ + QV  G ++  G 
Sbjct: 30  LVLLGFGGFLLWGLLAPLDKGVPVSGSVVVAGNRKAVQHPSGGVVSQIQVHEGDRVRAGQ 89

Query: 83  PLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ-- 137
            LL  + +++    D +  + +S    +  +  E+  L  +           ++R E+  
Sbjct: 90  VLLLMDTVDSRTQRDALRSQHLSNAAQQARLQAERDGLQAI-----AFPPLLQARREEPE 144

Query: 138 ---LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
              L+    +  ++        ++++  S+      +  +   R  L       +A+L  
Sbjct: 145 VMSLMLLQQQLFTSRRAALQSELAAIAESIAGSQAMLEGV---RRILRPAKQRQKAML-- 199

Query: 195 HQKDLTMMKN-----LFEKNAVS---QNDLNQQE-------RIVYKSTLELRENIHEQKN 239
            Q+ L+ M+N     ++  +AV    Q+ ++ Q        R+  +S L+LR    E + 
Sbjct: 200 -QEQLSGMRNWPAQGMWRASAVGSEGQHRISTQASRIPDIGRLGRQSELKLRSPAREYQK 258

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            +      YDEA+ E  N L +   DL   Q                     + +P+AGT
Sbjct: 259 EVSSQLPRYDEAD-ELDNRLAKAEADLGHTQ---------------------VKAPVAGT 296

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +V    F+        Q LM+IVP  +   + A++  + I  V+ G    + F  +    
Sbjct: 297 VVGLSVFTEGGVIGAGQQLMEIVPSDRGLQVEARIPVELIDKVQVGLPVELLFSAFNQST 356

Query: 360 EKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFT 416
             + +  +  +  D +  ++        YY V  K+++      N +E+R G P E    
Sbjct: 357 TPRVEGEVTLVGADRLTDEKSGA----PYYSVRAKVSEEGLQRLNGLEIRPGMPVEGFIR 412

Query: 417 AKNTTLAQEIIHPITD 432
               ++   +  P+TD
Sbjct: 413 TGERSMMNYLFKPLTD 428


>gi|229592737|ref|YP_002874856.1| hypothetical protein PFLU5357 [Pseudomonas fluorescens SBW25]
 gi|229364603|emb|CAY52501.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 441

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 83/422 (19%), Positives = 170/422 (40%), Gaps = 30/422 (7%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL + G  G + W+ L P++  V+ SG+++   +   ++ P  GI+++  V +G  +  G
Sbjct: 30  LLVLGGFAGFLGWAALAPLDKGVAVSGKVMVSGHRKTVQHPAGGIVERIDVRDGEVVSAG 89

Query: 82  TPLLTFEDIE-TTDLIDLKKVSIKNL----RCHIDTEK-SALDFLNNKYDVLEKAFE-SR 134
             LL  ++      +  L+   + +L    R   ++E  SA+ F     D  E A   + 
Sbjct: 90  QVLLRLKETPLRGQMQSLRSQYVASLASEARLSAESEGLSAITFAPELLDDPEAAATLNL 149

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + QL +   +  +T  +     I+     L+       S    R  L  +   LRAL   
Sbjct: 150 QRQLFNSRAQALATEQQGLRETIAGAEAQLRGTRDSQASKVQQRAALSEQLQGLRAL--- 206

Query: 195 HQKDLTMMKN--LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
             +D  + +N  L  +   SQ D    E   Y    +L+  + E +  +RH+ E      
Sbjct: 207 -ARDGYIPRNRLLDSERLYSQVDGAIAED--YGRIGQLQRQVLELRLRIRHLGE------ 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEM-SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               ++ K++   L +  RT +D++ ++L   E       + +P +G +V    ++    
Sbjct: 258 ----DFQKDLRGQLAET-RTRSDDLRNRLASAEFELANSLVRAPASGVVVGLDVYTEGGV 312

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +  Q LM IVP  +   + A+V  + +  V  G    + F  +      +    +  + 
Sbjct: 313 IKPGQALMDIVPQGEPLLVEARVPVQMVDKVHPGLPVELLFSAFNQATTPRVAGEVTLVS 372

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
               +Q +    + YY +  +++       + +++R G P E        ++   +  P+
Sbjct: 373 --ADRQVDERTDEPYYTLRAQVSAAGMQQLDGVQIRPGMPVETFIKTGERSMLNYLFKPL 430

Query: 431 TD 432
            D
Sbjct: 431 LD 432


>gi|121608611|ref|YP_996418.1| HlyD family type I secretion membrane fusion protein
           [Verminephrobacter eiseniae EF01-2]
 gi|121553251|gb|ABM57400.1| type I secretion membrane fusion protein, HlyD family
           [Verminephrobacter eiseniae EF01-2]
          Length = 453

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/403 (19%), Positives = 159/403 (39%), Gaps = 17/403 (4%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ L P++  V S G +  +     ++    GI+K+  V  G  +  G PL+  +D    
Sbjct: 51  WATLAPLDEGVPSQGVVTLDTKRKLVQHLTGGIVKQVFVREGDMVQAGQPLIELDDAVAK 110

Query: 94  ---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
              + +  + + ++ ++  +  E++    ++   D+   A +    Q + +  +   +  
Sbjct: 111 ANYEAVRQRYLGLRTVQSRLLAEQTGAAKISFHPDLQAAADDPLIRQQMQYQEQLILSRR 170

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 + ++  S++ +   ++S Y   L      +  R  L   + +L   + L ++  
Sbjct: 171 AALRADLQAIEESIQGQKALLQS-YAGML------TSRRGQLGLLEDELRHTRELVKEGY 223

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +N   + ER+V +S L + + +       R I E+  +A      Y KE+   L    
Sbjct: 224 TPRNRQLELERMVAESNLSITDLLGNTMRTQRSIGEMRQKALAREQEYRKEVESMLGDVT 283

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           R    +  K   L+   E+  I SP++G +V     +     Q  Q LM IVP      +
Sbjct: 284 RDVQSDTDKYLALKADLERIEIRSPVSGQVVGLAVQTVGAVIQPGQQLMGIVPPDAPLLL 343

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYE 388
            A + P  I  ++ G  A VRF  +A       +  +  +  D +   Q        YY 
Sbjct: 344 EAHIAPHLIDKLRPGLHADVRFSAFAHSPHLVVQGELASVSGDLLTDAQSGV----SYYL 399

Query: 389 VILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             +K+T           L+ G PAEV+      T+   ++ P+
Sbjct: 400 ARIKVTSEGMKTLGQRHLQPGMPAEVVIKTGERTMLTYLLGPL 442


>gi|27383024|ref|NP_774553.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110]
 gi|27356197|dbj|BAC53178.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110]
          Length = 456

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/415 (19%), Positives = 174/415 (41%), Gaps = 25/415 (6%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+  + I  ++ + G+++ E NV +++ P  G++ + +  +G  +  G  ++  +D  T 
Sbjct: 54  WAATVQISGALIAPGQVVVESNVKKVQHPTGGVVGELRARDGDVVKAGDVVVRLDDTVTK 113

Query: 94  DLIDLKKVSIKNL------RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +    +  KNL         +  E+  +D ++    +L++  +   + LL       S
Sbjct: 114 ANL---AIVTKNLDAALARAARLQAEQRGIDRIDFPQSLLDRGNDYDVKTLL-------S 163

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL---LSSHQKDLTMMKN 204
             +K+F+  ++   R+ +    R R   LN  ++E  S+  RA    +S  Q++LT +++
Sbjct: 164 AETKLFDVRVNG--RAGQKAQLRERIQQLNE-EIEGLSAQERAKDKEISLVQQELTGVRD 220

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L+EK+ V  + L   ER   +   E  + I  +      I E   +      + + E+S+
Sbjct: 221 LYEKHLVQISRLTTLERDSARLNGERAQYIASRAQAKGKITETELQIIQVDKDMVSEVSK 280

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           DL +      + + +    E    +  I +P  G ++ +   +          LM IVP 
Sbjct: 281 DLRETNDKIGELIERKVAAEDQLRRVDIRAPQDGMVLQSTVHTVGGVVTAGDALMLIVPQ 340

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +    + AKV P  I  ++ G    +R   +      +   ++ ++ P ++   +    Q
Sbjct: 341 ADDLQVEAKVNPVDIDKLQIGQKTLLRLSAFNQRTTPELNGVVSRVSPDVTT--DQRTGQ 398

Query: 385 EYYEVILKI-TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            YY + + +  +      + +L  G P E      + T+   ++ P+ D   + F
Sbjct: 399 SYYTIRVSLPAEEVVRLGDSKLIPGMPVEAFVQTGDRTMLSYLMKPLHDQLMRAF 453


>gi|170745190|ref|YP_001766647.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium radiotolerans JCM 2831]
 gi|170658791|gb|ACB27845.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium radiotolerans JCM 2831]
          Length = 454

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 82/427 (19%), Positives = 179/427 (41%), Gaps = 27/427 (6%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           + +  G++G  TW+    ++ +V S G ++ E +   ++    GI+++  V +G  +  G
Sbjct: 42  IFATFGVVG--TWATFARLDRAVISPGVVVAEGSRKVVQHLEGGIVQEVLVRDGQTVRAG 99

Query: 82  TPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             LL  + +++    DL +  +     L   +  E+S    L    ++  +  E     +
Sbjct: 100 DVLLRIDPVQSRASNDLLRGQLDAALILEARLRAEQSQAQDLLLPPEIAARRAEPAVAGM 159

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +D      S     F   ++ +   +    T +  + + +  +E + +L+       Q++
Sbjct: 160 IDDQASQLSERRGSFQAQLALIQARVTQLRTEISGLAVEKASVEQQVALI-------QQE 212

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  ++ L EKN +  + +   ER   +    +  ++ E       INE    A ++ A  
Sbjct: 213 LEGLRGLREKNLIPLSRVLMMEREHARLEGVIGRSVAETAKAQNGINE----AGMQTAQL 268

Query: 259 ---LKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              L+E ++  L   ++  A+   KL + +    +  + +   G I   + ++     + 
Sbjct: 269 KQKLQEALTAQLLDTRQKIAELREKLIVAQDVLRRHEVRASHQGVIQGLKVYTIGQVVRS 328

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            +PLM+IVP +    I  +  P  ++ V  G  A V+FP +   + ++  AI   +  ++
Sbjct: 329 GEPLMEIVPTNDRLVISVQFAPNDLEAVHAGLRAEVKFPAF---QTRRMSAIFGTLT-MV 384

Query: 375 SQQD--NNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           S+    ++     Y+   ++I D    D+    L  G PAEV+ +A   T    ++ P  
Sbjct: 385 SRDRLIDDGTKHAYFAGTVEIDDRQLPDDVRSRLLAGLPAEVVVSAGERTALDYLVAPFF 444

Query: 432 DNWPKIF 438
           D   + F
Sbjct: 445 DALGRSF 451


>gi|119511778|ref|ZP_01630880.1| RTX toxin transporter [Nodularia spumigena CCY9414]
 gi|119463551|gb|EAW44486.1| RTX toxin transporter [Nodularia spumigena CCY9414]
          Length = 526

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 164/394 (41%), Gaps = 60/394 (15%)

Query: 19  RMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R  +L++IG+    I W+    IE  V ++G++  E  V E++SP +G++K   +++G +
Sbjct: 61  RTIMLTLIGLACFGIIWAYFAKIEQVVPATGQLKPEGTVKEVQSPVNGVVKTVHIKDGEK 120

Query: 78  ILQGTPLLTFEDIETTDLID-LKKVSI---------KNLRCHIDTEKSALDFLNNKYDV- 126
           +  G  LLTFE + T   +D LKK+           + L     T  S + F   K  V 
Sbjct: 121 VKPGDLLLTFETVATVAELDALKKIRTALTEENQIYRRLMETSYTTASEVGFSRGKLPVN 180

Query: 127 LEKAFESREEQLL--DFLGKYHSTCSKVFNYGIS---------------SVYRSLKMKLT 169
            E   +SR   +   + L    S  + V   G+                S  R L+++ T
Sbjct: 181 AEFLLKSRTALIKENELLRAELSNLNTVAGLGVDEQKRLQFAQREFDSRSAGRQLEVEKT 240

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +     +       KSS     L+  Q  L  +K L E+  +SQ     Q++ V     E
Sbjct: 241 KKELAQIQVRKNNTKSS-----LAIQQGILDKIKTLAEEGGISQLQYLNQQQQVQTLQAE 295

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR------------------ 271
           + +   EQ+ +   I +   E     A   K +   +  N++                  
Sbjct: 296 IAQLDEEQQRLQFAIEQGQQEHKNTVAASGKNVLEKIADNKKRIAEIDSQFMKIVLNNEQ 355

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI- 330
           T AD  SK++  +   E + + +P+AGTI   ++ +    A  SQ +++IVP  K  YI 
Sbjct: 356 TLADLNSKISQAQLNFEYQELHAPVAGTIFDLKAKNPGFVANASQEVLQIVPEDK--YIA 413

Query: 331 RAKVTPKQIQHVKKGYTATVR-----FPHYADIR 359
              +T K I  V++G    VR     F  + DI+
Sbjct: 414 EVFITNKDIGFVREGMQVDVRIDSFPFSQFGDIK 447


>gi|302384377|ref|YP_003820200.1| type I secretion membrane fusion protein, HlyD family
           [Brevundimonas subvibrioides ATCC 15264]
 gi|302195005|gb|ADL02577.1| type I secretion membrane fusion protein, HlyD family
           [Brevundimonas subvibrioides ATCC 15264]
          Length = 445

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 80/432 (18%), Positives = 169/432 (39%), Gaps = 38/432 (8%)

Query: 23  LSIIGI--IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           +++IG+  +  + W+ + P++    ++G++    N   ++    G++    V  G ++ +
Sbjct: 26  MAVIGVFFVLFLGWAAIAPLDAGAYAAGQVAVSGNRQAVQHQQGGVVSALHVAEGDRVRR 85

Query: 81  GTPLL---TFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL-------DFLNNKYDVLEKA 130
           G  L+   T E   T   +  + VS+   R  +  E+  L       +F       L  A
Sbjct: 86  GQVLVELATGELQATERGVTGQVVSLLAQRARLIAERDGLASITTPAEFAGYTGPDLALA 145

Query: 131 FESREEQLLDFLGKYH--STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            ++   Q L F+ + +  ST + V    I  + + ++    ++ S    R  +E      
Sbjct: 146 QDAMRLQRLQFMARRNGRSTETGVLTQRIGQLNQQVEGLQRQIESNVAQRQLIE------ 199

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                   ++L  +++L  +    Q  +   ER    + + L   +   +  +   NE  
Sbjct: 200 --------RELDGVRSLAARGFAPQTRVMALER----TAVALDGELGSLRAQVAGTNEAV 247

Query: 249 DEANLEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +  L+       +  D    L Q + +  +   +L  L     +  + +P  G +V   
Sbjct: 248 GQTRLQMLGVSTTMEEDVADQLRQAEVSLNELRPRLAELRAQIARSRVRAPATGEVVGVT 307

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +F+        Q LM IVP +    I A + P  I +++ G +  V+FP   +       
Sbjct: 308 TFTVGGVITPGQTLMDIVPENASQVIIASINPSDIDNLRLGLSTEVKFPGLREQSTPLLH 367

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNTTLA 423
             + ++ P     + + +T    EV++   +L     +   +R G P EV+   +  T  
Sbjct: 368 GTVTRLSPDSFTDEKSGRTYYRAEVVIPPGELVKLGASAQSIRPGMPVEVVVLLRKRTAL 427

Query: 424 QEIIHPITDN-W 434
           Q +I P+T   W
Sbjct: 428 QYMIEPLTSGLW 439


>gi|90578132|ref|ZP_01233943.1| putative secretion protein, HlyD family [Vibrio angustum S14]
 gi|90441218|gb|EAS66398.1| putative secretion protein, HlyD family [Vibrio angustum S14]
          Length = 464

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/362 (20%), Positives = 153/362 (42%), Gaps = 26/362 (7%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + I+       W+    ++   + SG+++    +  +++   GI+KK  
Sbjct: 26  NTPKSARVILWVMILFFFTAFIWAYFAKLDKVTTGSGKVIPSSQLQIVQNLEGGIVKKVL 85

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA- 130
           V+ G Q+ +G  LL  +D +       K  S+ +++   D+++  L+ L     V  KA 
Sbjct: 86  VKEGEQVKKGQTLLLIDDTQFKSDFKEKTQSLASMQA--DSQR--LNALLASVTVSNKAD 141

Query: 131 ---------FESREEQLLDFLGKYHSTCSK----VFNYGISSVYRSLKMKLTRMRSIYLN 177
                     E +     D   K H    +     F   ++++   L +   +       
Sbjct: 142 NTHWRNSVTIERKPPVFDDAFKKAHPELVRRQLNQFTDKLNNLQNQLSVASEQASQKERE 201

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             + +++ S LR+  S  +K+  + K L E+  V + +L + +R    S  + + +++  
Sbjct: 202 LAETQSRVSNLRSSYSIARKEYNITKPLAEEGVVPRIELLKLQR----SLNDTKRDLNSA 257

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTREQKTIL 293
           K  +        EA  ++ +   +   D++      +D++  LT     LE   ++ T++
Sbjct: 258 KMQIPVTQAAIQEAGFKYIDIALQFRSDIQAQLNETSDKLGSLTETQIGLEDRVKRTTVV 317

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ GTI      +     Q   PL++IVP      I AK+ PK I  ++ G  A ++F 
Sbjct: 318 SPVTGTIQKIHVNTVGGVIQPGMPLVEIVPTEDTLLIEAKIAPKDIGFLRPGLPAVIKFS 377

Query: 354 HY 355
            Y
Sbjct: 378 AY 379


>gi|254429494|ref|ZP_05043201.1| auxiliary transport protein, MFP family, putative [Alcanivorax sp.
           DG881]
 gi|196195663|gb|EDX90622.1| auxiliary transport protein, MFP family, putative [Alcanivorax sp.
           DG881]
          Length = 433

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 89/405 (21%), Positives = 165/405 (40%), Gaps = 43/405 (10%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +++T L+   I+ ++ W++   ++  V + G+++    V +I+S   GI+K   VE G  
Sbjct: 17  RQVTWLASGLIVCVLVWAVFAQLDQVVVAQGQMIPTRTVQKIQSLEGGILKSMLVEEGQM 76

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSAL-----DFLNNKYDVLEK 129
           +  G PLL  +D      ++    SI+ L   +  +  E +++     D L +   + E 
Sbjct: 77  VEAGQPLLELDDTRFRASVEEAGQSIRGLEAAQARLQAELASVAIDNGDVLVSPVPMAEP 136

Query: 130 AFESR--EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL------TRMRSIYLNRLDL 181
           A  S   E +     G+  S   ++F        +    +       T+ +S+ L R DL
Sbjct: 137 ATPSPGWESERAALAGRLASLQGRLFQADRRVEQQRQIQQEAQRNLRTQQQSLALQRQDL 196

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +         L S   D  +  + F +    Q  L  +   V +++L++ +     +  +
Sbjct: 197 QA--------LESAVNDGVLPISEFRQAKRDQVALKGE---VDRASLQIAQYGAALQQAI 245

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                +  E   E    L E+   L Q Q        K   L+    + T+++P+ G IV
Sbjct: 246 AERRSIAAEFRAESQAELIEVETRLAQAQ-------EKQPALQDQLTRTTMVAPLRG-IV 297

Query: 302 YNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            N +F S     +  + +M+IVP        A+V+PK I  VK G    V+F  Y     
Sbjct: 298 KNIAFRSLGGVIRPGEAIMEIVPVEDALIAEARVSPKDIAWVKAGLDTQVKFSAYDFTSH 357

Query: 361 KKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
                 +E +  D +  ++DN      YY V + +  L+  D  I
Sbjct: 358 GGMPGQVEYVSADVLRDEEDNP-----YYRVKVALQGLSQPDQPI 397


>gi|332978178|gb|EGK14911.1| HlyD family secretion protein [Psychrobacter sp. 1501(2011)]
          Length = 389

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 93/417 (22%), Positives = 169/417 (40%), Gaps = 58/417 (13%)

Query: 19  RMTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+T+ ++++GI  L+ W+    I+    +   ++      ++++   G++    V  G +
Sbjct: 17  RLTIWIALVGITILLVWAYFAKIDQVTRAKATVIASARTQQVQASEGGVLTDILVSEGDE 76

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L+  E+                     +  K+A D    K   L+        +
Sbjct: 77  VKKGQLLVVLEE---------------------ERAKAAYDSSATKSAALQAQLARLNAE 115

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           + D   K  S  + V  Y     Y   + +L   R   +N    E  SSL + L+ + QK
Sbjct: 116 IFD---KPLSFPASVRQY---PEYVENQTQLYNRRRQAIN----EEVSSLEKMLVLA-QK 164

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +L M + L E   VSQ D+ +  R V         +I  Q N  R  N+ +++A  E   
Sbjct: 165 ELDMNEPLLEYGDVSQADVIKLRRQV--------ADIEAQINNKR--NKYFEDAQAEMTK 214

Query: 258 YLKEISRDLEQ-NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             +E+  +LEQ   RT            +  E+K +LSP  G +      +     +  +
Sbjct: 215 AQEELDSELEQLRDRT------------QVLEEKRLLSPQDGKVNNINITTIGGVVKPGE 262

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +M+++P S    + AKV+P  I +VK+G  A+V+   Y           +  I P    
Sbjct: 263 VIMELLPTSSDLIVEAKVSPADIAYVKEGQRASVKLDAYDFSIFGAMNGTVTYISPDTLM 322

Query: 377 QDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           +      + YY V++KI    F+   + I ++ G  A V   A   ++   +  PIT
Sbjct: 323 ETTPKGEEPYYRVLIKIGKAEFAGRGDEIVIKPGMTASVDIKAMERSVLSYLTKPIT 379


>gi|227114860|ref|ZP_03828516.1| HlyD family secretion protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 452

 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 89/432 (20%), Positives = 168/432 (38%), Gaps = 39/432 (9%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           LK    L + G  GL+ W+ + P++  V+ SG ++  DN   ++   SG I    V +G 
Sbjct: 35  LKYGLWLVLAGFGGLLLWAGMAPLDKGVAVSGRVVVADNRKVVQPVSSGRIASLTVRDGD 94

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESRE 135
           ++  G  L T +        D       NL   + +        L  + D+   AF +  
Sbjct: 95  RVQAGQVLATLDQTPAQAQRD-------NLTTQLQEAFAGEARLLAERDDLNTIAFPAPT 147

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN-KSSLLRALLSS 194
           EQ        HST ++        ++ S +  L + R+     +     +S   +ALL+S
Sbjct: 148 EQ--------HSTVTQQIQIAQQQLFISRRAALQQERAAIQAAIIGAKAQSQGSQALLAS 199

Query: 195 HQ-------KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            Q       + L  ++ L ++  +++N L   ER       +L   I +++N    + + 
Sbjct: 200 SQTQYQIISEQLRGLRPLAQEGYIARNRLLDVER----QAAQLAGAIAQERNNQVQLQQQ 255

Query: 248 YDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E   +       Y KE+   L   QR+  D   +L   E   +   I +P +GT+V  
Sbjct: 256 VVELEQKIQQRQNEYQKEVRAQLADTQRSIQDLTQRLKTAEYELQHTHIRAPASGTVVGL 315

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +        Q LM+IVP  +   I A++  + +  V  G    + F  +        
Sbjct: 316 ALHTEGGVVNSGQMLMEIVPEGQPLLIDAQLPIELVDRVSNGLPVELLFSAFNQSTTPHI 375

Query: 364 KAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
             ++  I  D ++ QQ      + YY + + + +        +++R G P +        
Sbjct: 376 SGVVALIGADQLVEQQTG----KPYYALRIHVDEQGKQQLAGLDVRPGMPVQAFIRTGER 431

Query: 421 TLAQEIIHPITD 432
           +L   +  P++D
Sbjct: 432 SLLNYLFKPLSD 443


>gi|56416529|ref|YP_153603.1| alkaline protease secretion protein [Anaplasma marginale str. St.
           Maries]
 gi|222474897|ref|YP_002563312.1| alkaline protease secretion protein (aprE) [Anaplasma marginale
           str. Florida]
 gi|254994749|ref|ZP_05276939.1| alkaline protease secretion protein (aprE) [Anaplasma marginale
           str. Mississippi]
 gi|255002869|ref|ZP_05277833.1| alkaline protease secretion protein (aprE) [Anaplasma marginale
           str. Puerto Rico]
 gi|255004001|ref|ZP_05278802.1| alkaline protease secretion protein (aprE) [Anaplasma marginale
           str. Virginia]
 gi|56387761|gb|AAV86348.1| alkaline protease secretion protein [Anaplasma marginale str. St.
           Maries]
 gi|222419033|gb|ACM49056.1| alkaline protease secretion protein (aprE) [Anaplasma marginale
           str. Florida]
          Length = 512

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 104/466 (22%), Positives = 183/466 (39%), Gaps = 72/466 (15%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P  +  + +++  G  G+  W+   P++ +V + GE+++  N   ++    GII +  V+
Sbjct: 77  PLLVGLVVVIAFFGFFGI--WAATAPLDGAVIAPGEVVSSLNRQVVQHLEGGIIHQILVQ 134

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKK-------------VSIKNLRCHIDTEKSALDFL 120
           +G  + +G PL+   D      + + K             ++IKN    ID      D  
Sbjct: 135 DGDAVSKGQPLVLLNDTAAKANLGIIKEKMLVLLATEARLLAIKNRSGSIDFPAGIHDL- 193

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSK--VFNYGISSVYRSLKMKLTRMRS----I 174
            +  DV++K   ++ E    F  +  S   +  +    I  +++ L     ++ S     
Sbjct: 194 -SSADVVDKVLGNQREL---FYSQRKSVSGQLSILEQRIKQLHQELSGLAAQLESEEKQY 249

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            L   +LE K SLL     S    L    NL    A ++  L      +  +  ++ EN 
Sbjct: 250 KLISEELEAKKSLLEEGYISKPYIL----NLERTQADAEGKLGHIRAKIASAEQKIGEN- 304

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             Q  M+   N L D  N E           L++   +  D   +L   E   ++  I S
Sbjct: 305 --QLEMIHITNTLLDRTNSE-----------LKETNASVTDLRERLMAAEDVLKRTVIRS 351

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV------------ 342
           P  G +   +  +          ++++VP      I AK+  + I+ V            
Sbjct: 352 PQNGIVTGLRYHTEGGVIPPGGAILEVVPADDDLIIDAKIPTRNIEEVLSARAVEENLVT 411

Query: 343 ---KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----EYYEVILKITD 395
                G  A VR   Y +IR  KF      ID I++Q   +  T     +YY + + I  
Sbjct: 412 SGEHSGLRAKVRLSAY-NIR--KFGL----IDGIVTQVSADALTDSSGVKYYSLRVVIPK 464

Query: 396 LAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            A S    N++L +G PAEV    ++ TL   ++ PIT  + K F+
Sbjct: 465 SAHSGKFKNLKLYHGMPAEVFVVTRSRTLLNYLLTPITSTFEKAFK 510


>gi|269959056|ref|YP_003328845.1| putative secretion protein [Anaplasma centrale str. Israel]
 gi|269848887|gb|ACZ49531.1| putative secretion protein [Anaplasma centrale str. Israel]
          Length = 512

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 106/464 (22%), Positives = 183/464 (39%), Gaps = 68/464 (14%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P  +  + +++  G  G+  W+   P++ +V + GE+++  N   ++    GII +  V+
Sbjct: 77  PLLVGLVVVIAFFGFFGI--WAATAPLDGAVIAPGEVVSSLNRQVVQHLEGGIIHQILVQ 134

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKK-------------VSIKNLRCHIDTEKSALDFL 120
           +G  + +G PL+   D      + + K             ++ KN   +ID      D  
Sbjct: 135 DGDAVSKGQPLVLLNDTAAKANLGIIKEKMLILLATEARLLATKNRSGNIDFPPGIHDLS 194

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS----IYL 176
           N   DV++K   ++ E L     K  S   K+    I  + + L     ++ S      L
Sbjct: 195 N--ADVVDKVLGNQRE-LFYSQRKSISGQLKILEQRIKQLNQELSGLAAQLESEEKQYKL 251

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              +LE K SLL+    S    L    NL   +A ++  L      +  +  ++ EN   
Sbjct: 252 ISEELETKKSLLKEGYISKPYIL----NLERAHADAEGKLGHIRAKIASAEQKIGEN--- 304

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q  M+   N L D  N E           L++      D   +L   E   ++  I SP 
Sbjct: 305 QLEMIHITNTLLDRTNSE-----------LKETDAAVTDLRERLMAAEDVLKRTVIRSPQ 353

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV-------------- 342
            G +   +  +          ++++VP      I AK+  + I+ V              
Sbjct: 354 NGIVTGLRYHTEGGVIPPGGAILEVVPADDDLIIDAKMPTRNIEEVLSAMAVEENLITSG 413

Query: 343 -KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT----QEYYEVILKITDLA 397
              G  A VR   Y +IR  KF      ID I++Q   +  T     +YY + + I   A
Sbjct: 414 EHGGLRAKVRLSAY-NIR--KFGL----IDGIVTQVSADALTDPSGAKYYSLRVVIPKSA 466

Query: 398 FSD--NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            S    N++L +G PAEV    ++ TL   ++ PIT  + K F+
Sbjct: 467 HSGKFKNLKLYHGMPAEVFVVTRSRTLLNYLLTPITSTFEKAFK 510


>gi|67458902|ref|YP_246526.1| alkaline protease secretion protein AprE [Rickettsia felis
           URRWXCal2]
 gi|67004435|gb|AAY61361.1| Alkaline protease secretion protein AprE [Rickettsia felis
           URRWXCal2]
          Length = 511

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 176/446 (39%), Gaps = 28/446 (6%)

Query: 11  RNHPASLKRMTLLSIIGIIGLIT-----WSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           RN+ A   R  +L  I +I  +      W+ L P++    + G ++   N   I+    G
Sbjct: 73  RNNVAQAARSPILFGIYVIIFLVLIGGLWAALAPLDSGAVAVGIVMPSTNKKTIQHNEGG 132

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           II    V+ G ++ +G  L+   ++E T +    +  +   R  + TE   +   +N   
Sbjct: 133 IINAIYVKQGDKVKEGDKLI---ELEETRIKSEHENILGQYRNFLATENRLIAERDNLEQ 189

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENK 184
           +    F  ++  L +     H T   +F      VY S K  L +  +    +++ LE K
Sbjct: 190 IEFSDFLMQDINLPEVAKIIH-TQENLFR-SRKEVYNSEKDALHQNIAQLEKKIEGLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  ++ L EK  V +  L  QE  V  S    + ++   +  +  I
Sbjct: 248 KVAASKTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAAS----KSDVATTEAEIAGI 303

Query: 245 NELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                E  ++  N    Y +    +L + Q   A    K   L  +  +  I SP+ G I
Sbjct: 304 RHAITETQIKIINQQNKYTERTLTELREAQVQTASLKEKYNSLTDSLNRVIIRSPVDG-I 362

Query: 301 VYNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           V N  + +        QP+M+I P +    I AKV+ K I  V +G  A +RF  +    
Sbjct: 363 VNNLKYHTIGGVISHGQPIMEISPINDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRT 422

Query: 360 EKKFKAIIEKIDPIISQ---QDNNLQTQEYYEVILKITDLAFSD----NNIELRNGFPAE 412
              F   +  I P I Q   Q    Q   YY   ++I    F+      N+EL  G  AE
Sbjct: 423 TPTFTGKVVSISPDIVQDERQHPGQQQDNYYVARVEIDMDEFNKVAKVKNLELHPGMQAE 482

Query: 413 VLFTAKNTTLAQEIIHPITDNWPKIF 438
           V       TL + ++ P+TD   K F
Sbjct: 483 VQIVTGTRTLLRYLLDPVTDTAFKAF 508


>gi|90411762|ref|ZP_01219771.1| type I secretion membrane fusion protein, HlyD [Photobacterium
           profundum 3TCK]
 gi|90327324|gb|EAS43688.1| type I secretion membrane fusion protein, HlyD [Photobacterium
           profundum 3TCK]
          Length = 432

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 92/423 (21%), Positives = 173/423 (40%), Gaps = 22/423 (5%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           I+ + G I W+    +  +  +SG ++ E    +++    G +K   V  G ++  G  L
Sbjct: 20  ILAVGGFILWATTAKLSSASVASGTLVVESQRKKVQHLEGGWVKAIYVSEGQKVKVGDVL 79

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF--ESREEQLLDFL 142
           +   +       D +++ ++ +      ++ + +  N K  V    F  E  E QL + +
Sbjct: 80  VELANSRAES--DFRRLILRAVSLQAQHDRLSTELSNRKDLVWSNLFFDEVEEGQLANII 137

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL---LSSHQKDL 199
                  S+   Y  S ++  L+    + R + L    +      L A+   L    +++
Sbjct: 138 N------SQQLQYQQSVLHEELREGQYQQRKVLLQE-QIRGTGFQLSAIQRQLDLANEEI 190

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            M  +L +K  VS+  + + +R       +  E   E + + + +  L      E   + 
Sbjct: 191 QMTMSLLKKGFVSKTRVLEIKRYHAGIDAQKAELEGESEVLTQQLLSLKQGHKSEIIEFK 250

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           + ++  LEQ+++   D    L      RE+  I S   GT+V     S          +M
Sbjct: 251 QGLTAQLEQSEKELRDVKQALKSARDVRERVKIRSEHTGTVVGLNVHSVGGVVNAGDVIM 310

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK---KFKAIIEKIDPIISQ 376
           +IVP S    + A V P+ I  V++G TA VR   Y +IR     + + I    D +  +
Sbjct: 311 EIVPDSDALIVEAVVKPEDIDVVRQGLTAKVRLSAY-NIRRTPPVQGEVIYVAADRLQPR 369

Query: 377 QDNNLQTQEYYEVILKI-TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
            DN   +   Y V +K+ +D      NIEL  G P EV    ++ TL   +  P+  ++ 
Sbjct: 370 TDN---SPTGYVVKVKLDSDEIKILGNIELYPGMPTEVFILLEDKTLWDYLTAPLFSSYY 426

Query: 436 KIF 438
           + F
Sbjct: 427 RAF 429


>gi|83951227|ref|ZP_00959960.1| RTX secretion protein D, HlyD family protein [Roseovarius
           nubinhibens ISM]
 gi|83839126|gb|EAP78422.1| RTX secretion protein D, HlyD family protein [Roseovarius
           nubinhibens ISM]
          Length = 448

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 87/440 (19%), Positives = 177/440 (40%), Gaps = 38/440 (8%)

Query: 17  LKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           L R+  L++ I  +G   W+    +  +V + G ++ +     ++ P  G +    V  G
Sbjct: 27  LMRLGWLALLILCLGFGGWAFAARLSQAVVAPGWVVRDMAAHVVQHPDGGTLAALAVRPG 86

Query: 76  SQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEK---SALDF---LNNKYDV 126
            Q+ +G  L  FE  E  +   L++ +   +   R  ++ E+   +A+DF   L N+   
Sbjct: 87  MQVAKGALLARFEGGEIAEELILVEARLFEVMARRARLEAERDGAAAIDFDPELRNRAAG 146

Query: 127 LEKAFESREEQLLDFLGKYHST--CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            E   E+ + Q     G+  +T   ++    G +             R +  +R +++  
Sbjct: 147 DEGLAETLQGQ-----GRLFATRRAAQAREAGQAR------------RRVAQSRAEIDGL 189

Query: 185 SSLLRALLSSH---QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            +  RAL        ++LT ++ L  +       +   ER   +   EL E    +    
Sbjct: 190 GAQARALRRQAGLIAQELTDLRQLRAQGLTPAGRVLALEREAARLDGELGEVAAHRAGAE 249

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTI 300
             I E+  E  L   + ++E   D  ++ R    E+++   + + R  +  L +P+AGTI
Sbjct: 250 GRIAEIELE-QLGRESRMRERVIDQLRDLRHREIELAETRRVLRARFARLELRAPVAGTI 308

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              +        + + P++ +V   +  ++ A+++P ++  +  G  A +RF        
Sbjct: 309 QQVEVHGPGAVIRPAAPILTLVAGDRPIHVSAEISPLEVDQIYSGQAALLRFSALEQGEG 368

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYY--EVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +   A +  I P + Q  +    + YY  EV  +   L        L  G P EV     
Sbjct: 369 RDVAAKVGSISPDVVQ--DGADGRRYYRAEVWAEAEALRPLQERAGLVPGMPVEVYLQTG 426

Query: 419 NTTLAQEIIHPITDNWPKIF 438
             + AQ ++ P+T  + + F
Sbjct: 427 EQSPAQFLLRPVTAYFNRAF 446


>gi|238794897|ref|ZP_04638496.1| HlyD family secretion protein [Yersinia intermedia ATCC 29909]
 gi|238725772|gb|EEQ17327.1| HlyD family secretion protein [Yersinia intermedia ATCC 29909]
          Length = 452

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 84/432 (19%), Positives = 167/432 (38%), Gaps = 39/432 (9%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL I G IG + W+ L P++  ++  G+++  +N   I+    G I++  +  G ++  G
Sbjct: 42  LLVIGGFIGFLLWAGLAPLDKGIAVMGQVVVAENRKVIQPLQGGRIQQLHIAEGDEVTVG 101

Query: 82  TPLLTFEDI---ETTDLIDLKKVSIKNLRCHIDTEKSALD--------FLNNKYDVLEKA 130
             L+T +D       D +  + +S       +  E+  +D        FLN    ++E+ 
Sbjct: 102 QLLITMDDSVIRSQRDSLQNQYISALAQEARLTAEQDGVDEITFPQTLFLNPAQPLVERN 161

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               ++QL  F  +  +  S+     I+ +   +     R+  +   R + + +S L   
Sbjct: 162 I-ILQQQL--FHHRRQAQLSE-----IARLSAQITRHQDRLNGLQAMRRNNQRQSDLF-- 211

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                Q+ L  ++ L     V++N L   ER      + L   + +  + +   ++L DE
Sbjct: 212 -----QRQLQSIQLLARNGHVAKNQLLDMER----QAISLHARVEQDTSDIEEAHKLIDE 262

Query: 251 ANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                +     Y  E    L + Q+   +   +L I E   +   I +P++G I+     
Sbjct: 263 TKQHISQRHEQYKSENREQLAKAQQNTQELKQRLNIAEYELDNTRIYAPVSGAIIALAQH 322

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +        Q LM++VP  +   + A++  + I   K G    + F  +      K    
Sbjct: 323 TVGGVVSSGQTLMELVPRGQPLLVEAQLPVELIDKAKAGLPVDLNFSAFNQSNTPKLYGT 382

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  +     Q    LQ   YY + + I     S+  + +R G   +V       +L   +
Sbjct: 383 VLHVGADRIQHPQTLQP--YYPLTVAID---MSNTELAIRPGMSVDVFIRTGERSLLNYL 437

Query: 427 IHPITDNWPKIF 438
             P+ D     F
Sbjct: 438 FKPLADRLHVAF 449


>gi|88608033|ref|YP_506803.1| HlyD family type I secretion membrane fusion protein [Neorickettsia
           sennetsu str. Miyayama]
 gi|88600202|gb|ABD45670.1| type I secretion membrane fusion protein, HlyD family
           [Neorickettsia sennetsu str. Miyayama]
          Length = 494

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 104/447 (23%), Positives = 187/447 (41%), Gaps = 46/447 (10%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + L+   GI G+  W++  PI+ +  + GEI+   +   ++    GII++  V  G  + 
Sbjct: 63  VVLIGFFGIFGM--WAVFAPIDGASLAMGEIVISSDKKSVQHLEGGIIEEIFVHEGDHVT 120

Query: 80  QGTPLLTFEDIETT---DLIDLKKVSI----KNLRCHIDTEKSALDFLNNK---YDVLEK 129
           +G  L+T +++       +++  ++S+    + L  HI   K+ ++  N +   Y   EK
Sbjct: 121 EGQVLMTLKNVGNKAQLSILEENQISLLATEQRLLAHIG-RKANMELPNIEKLEYVTEEK 179

Query: 130 AFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
             ++ + Q+L F     S  +KV   +  I  +   +     ++ S   N   LE +   
Sbjct: 180 KSDTIKNQVLLFESNKESFANKVRIIDKKIGQIQNEVLALKAQLESAEKNIQLLEEELEA 239

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            R+L   H  D T + +L E+  +S N      +I     L  R   H  +  L  I ++
Sbjct: 240 KRSLYDEHVIDKTKIVSL-ERERISWNG-----KIAEYKALIARGEQHVTEAELEKI-QV 292

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            +  N E A  LKE+S  + +N       M KLT       +  I +P +G +   +S S
Sbjct: 293 ENSFNSELAAQLKEVSHAIHEN-------MQKLTAAYDLMLRTIIRAPQSGIVTGLRSLS 345

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH------VKK------GYTATVRFPHY 355
                  +  LM+IVP ++  +I AKV P  I+       VKK      GY         
Sbjct: 346 IGGVIPPAISLMEIVPENEDMFIEAKVAPNNIEAIVSARLVKKNLSEVEGYIGVRTRVKI 405

Query: 356 ADIREKKFKAIIEKIDPIISQQD--NNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPA 411
                KK   I++ +   IS     +      YY   ++I  +++A  +   +L  G PA
Sbjct: 406 TAFNSKKV-GILKGVMTYISANTILDPRTGMHYYLAHIRIPKSEIAMINARTKLYPGMPA 464

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIF 438
            V  T ++ +    ++ PI   +   F
Sbjct: 465 IVFITTESRSFLSYLLAPIIGTFDTAF 491


>gi|269103392|ref|ZP_06156089.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163290|gb|EEZ41786.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 460

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 172/434 (39%), Gaps = 55/434 (12%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++K +  + P   + +  L  I +I  I+W+    ++      G+++    V  I+
Sbjct: 12  MTDDLYKAMLLDSPKQHRWVIRLFFIMVICFISWAAWAQLDQVTRGEGKVIPSSQVQMIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIE-TTDLI------------------DLKKV 101
           S   GI+++  V  G Q+ +G PL   +D    +DL                   +++ +
Sbjct: 72  SLDGGILQELFVTEGMQVTKGQPLARIDDTRFRSDLAQQVEEEESLQANIFRLKQEIQSI 131

Query: 102 SI----KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL-DFLGKYHSTCSKVFNYG 156
            I    K  +  +   K+ LDF         KA  + E +L+     +YH    +  N  
Sbjct: 132 EIADANKGWKEQVRVNKAPLDF--------PKALVANEPELIKQQTAEYHGRLDE-LNNQ 182

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           I+ + R +  K             L ++   L++ L    K+L M + L  K  VS+ DL
Sbjct: 183 IAILARQIVQKQQESHG-------LVSQIKTLKSSLHLINKELVMTRPLARKGIVSEVDL 235

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            Q +R V ++  EL     +Q  +   ++E   +       Y KE    L +     +  
Sbjct: 236 LQLQRQVNETKGELSTLYLQQPKVKAALDEAILKRREAVLTYNKEARAQLNE----LSAR 291

Query: 277 MSKLTILEKTREQKT----ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           +S+LT  +   + K     I SP+ GTI      +     Q  + +M+IVP      I  
Sbjct: 292 LSRLTEAQVGAQDKVDKAIITSPVNGTIKMINIMTLGGVVQPGKDIMEIVPSEDQLLIEV 351

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ-QDNNLQTQEYY--EV 389
           K+ PK I  +  G  A V+   Y   R       +  I    +Q +D+N     +Y  +V
Sbjct: 352 KIAPKDIAFLHPGLPAVVKVTAYDFTRYGGLDGTVVTISADTTQDKDDN----SFYLIKV 407

Query: 390 ILKITDLAFSDNNI 403
             K + LA SD  +
Sbjct: 408 RTKESSLARSDGTL 421


>gi|238755254|ref|ZP_04616598.1| protease secretion protein prtE [Yersinia ruckeri ATCC 29473]
 gi|17426964|emb|CAD13437.1| putative metalloprotease secretion protein [Yersinia ruckeri]
 gi|238706488|gb|EEP98861.1| protease secretion protein prtE [Yersinia ruckeri ATCC 29473]
          Length = 443

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 86/434 (19%), Positives = 183/434 (42%), Gaps = 53/434 (12%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L + G    + W++L P++  V  +G ++   N   I+ P  GI+++ +V +G ++  G 
Sbjct: 30  LVLAGFGSFMLWALLAPLDKGVPVTGTVVVSGNRKAIQHPEGGIVERIRVHDGDRVEAGE 89

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-------E 135
            LLT   +                       +SA D L  +Y  L  A E+R       E
Sbjct: 90  VLLTLNAVRA---------------------RSASDGLTAQYHQL-LANEARLLAEQKGE 127

Query: 136 EQLLDF----LGKYHSTCSKVFNYG---ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            QLL+     L +     + +       ++S  ++L++++  +R+   N   L+   +  
Sbjct: 128 TQLLNTPHLELARQQPGMADILALQQQLLNSRQQALQLEMDGLRA---NIAGLQATMNAQ 184

Query: 189 RALLSSH-------QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           R +LSS         + L  +++L E+N V +N + +  +   +   E+ +   E     
Sbjct: 185 RRVLSSKNLQKQALSQQLAGLQSLTEENYVPRNKMLETRQRYAELNGEIAQLSGEITRAE 244

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R I +     +     Y KE++  L + Q T    +S+L   +       + SP+AGT+V
Sbjct: 245 REIQQQNFRISQRQQEYQKEVNTQLAELQSTLTSVISQLESADFDLANVQMRSPVAGTVV 304

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F+        Q LM+IVP ++  ++ A+V    +  ++ G    ++F  +      
Sbjct: 305 EMKVFTEGGVIAAGQSLMEIVPDNQPLFVDARVPVAMVDKIQTGLLVELQFTAFNQSTTP 364

Query: 362 KFKAIIE--KIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
           K +  ++    D ++ ++      + YY + +++++      + ++++ G P +      
Sbjct: 365 KVEGTVKLLSADRLLDERTE----EPYYSMRVEVSETGRQKLDGLDVKPGMPVQGFVRTG 420

Query: 419 NTTLAQEIIHPITD 432
             TL   +  P+ D
Sbjct: 421 ERTLMNYLFKPLMD 434


>gi|296388079|ref|ZP_06877554.1| metalloprotease secretion protein [Pseudomonas aeruginosa PAb1]
          Length = 443

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 76/418 (18%), Positives = 171/418 (40%), Gaps = 20/418 (4%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L ++G +G + W+ L P++  V  SG ++   +   ++ P  G+++  +V  G ++  G 
Sbjct: 31  LVLLGFVGFLLWAGLAPLDKGVGVSGTVMVAGSRKAVQHPTGGLVRHIRVHEGERVEAGQ 90

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            LL  +  +        +     L        ++L  L+ + D  EKA      +LL   
Sbjct: 91  VLLEMDATQA-------RAQADGLFAQYLAALASLARLSAERD--EKARIEFPAELLALD 141

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRA---LLSSHQKD 198
                T  +       S  R+L+++L  +  ++  ++  L+   + LR+     ++ Q+ 
Sbjct: 142 DPRLPTLLEQQRQLHDSRRRALRLELDGLAETVAGSQAQLDGLQAALRSKEQQRAALQEQ 201

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  ++ L  +  V +N L   ER++ +   E+  ++    +  R I EL          +
Sbjct: 202 LRGLRQLASEGYVPRNRLLDSERLLAQVNGEIAGDLGSLGSTRRQILELRLRMAQRREKF 261

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            +E+   L   Q    +  ++L           + +P+AG +V  + F+        Q L
Sbjct: 262 QEEVRASLADAQVRAEELRNRLASARFDLANSEVRAPVAGLVVGQEVFTEGGVIAPGQQL 321

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQ 376
           M+I+P  +   + A++  + +  V+ G    + F  ++     + +  +  +  D ++ +
Sbjct: 322 MEILPERQPLLVDARLPVEMVDKVRVGLPVELMFSAFSQSTTPRVEGEVTLVSADRLLDE 381

Query: 377 QDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           +        YY V +++ +        +E+R G P E    +   +L   +  P+ D 
Sbjct: 382 RSEA----PYYRVRIRVGEEGVRRLAGLEIRPGMPVEAFVRSGERSLLNYLFKPLADR 435


>gi|119504417|ref|ZP_01626497.1| Type I secretion membrane fusion protein, HlyD [marine gamma
           proteobacterium HTCC2080]
 gi|119459925|gb|EAW41020.1| Type I secretion membrane fusion protein, HlyD [marine gamma
           proteobacterium HTCC2080]
          Length = 625

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 90/436 (20%), Positives = 182/436 (41%), Gaps = 63/436 (14%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
            P   +R+     + ++ +I W+    ++I     G+++    V  + S   G+I +  V
Sbjct: 211 EPLKTRRLLYGIALSVVMIIVWATFAEVDIVTRGQGKVIPSRQVQILGSQDGGVITEILV 270

Query: 73  ENGSQILQGTPLLTFEDI-----------ETTDLIDLKKVSIKNLRCHIDTE--KSALDF 119
             G  + +G  LL  +             E + LI    V    LR   D +  +   + 
Sbjct: 271 REGDLVQKGELLLKLDQTRSQSSLGENMAERSGLI----VRAARLRAMADGQPFEPTQEM 326

Query: 120 LNNKYDVL---EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           L +  D++   ++ ++SR E+L                 GI+S  + LK +   +R + +
Sbjct: 327 LTDTADIVYQEKQLYDSRLEEL-------------EVQKGIAS--QQLKQRREELRELGV 371

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            R  L  +       L    ++L+    + E  AVS  ++ + +R V K+  EL +   +
Sbjct: 372 RRGQLGRE-------LELATEELSTTTPMIESGAVSPVEVLRLQREVNKAEGELNQTRAQ 424

Query: 237 QKNMLRHINELYDE---ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              +   I+E   +    +LEF+N ++E   D         +  + L+  ++ R Q  +L
Sbjct: 425 LSRVSASISEAEGKLAGVDLEFSNGVREQLADTVNRINALKEAGAGLS--DRVR-QTNLL 481

Query: 294 SPIAGTI---VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           SP+ GTI   +YN   +        + +++++P      +  +V P+ I  +  G  A V
Sbjct: 482 SPVTGTIKQLLYN---TVGGIVLPGRDIVELIPADDSLLVEVRVRPQDIAFMAPGQVANV 538

Query: 351 RFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           +   Y  +     +  +E+I  D ++ ++ N      +Y+V ++ T +AF  +   +  G
Sbjct: 539 KVTAYDFVVYGGLEGKVEQIGADTVLDEEGNA-----FYDVAVRTTTVAFGKDQ-PIIPG 592

Query: 409 FPAEV-LFTAKNTTLA 423
              EV + T K T +A
Sbjct: 593 MTVEVDILTGKKTIMA 608


>gi|27367863|ref|NP_763390.1| secretion protein, HlyD family [Vibrio vulnificus CMCP6]
 gi|27359436|gb|AAO08380.1|AE016813_132 Secretion protein, HlyD family [Vibrio vulnificus CMCP6]
          Length = 442

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 160/386 (41%), Gaps = 63/386 (16%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             MW N +  + +  +R+  L    ++ +  W+    ++  V   G+++   ++  I+S 
Sbjct: 4   QIMWSNNRIAYRS--RRLIWLCAALVLAIGVWASWATLDEVVVGDGKVVPSLSIQTIQSL 61

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GIIK+  V  G Q+++G PL+  +D   T      + S + L+  +  +K  LD L  
Sbjct: 62  EGGIIKQVLVSQGEQVVKGQPLMVLDD---TRFRASYQESDQQLQTLL-AQKKRLD-LEL 116

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY---LNRL 179
           +  V++      ++Q+      Y S   +V     ++            R  Y   L +L
Sbjct: 117 QSIVVDGRATDWQQQVRIAKQPYPSGQDEVTRAEFNA------------RENYHQRLEQL 164

Query: 180 DLENKSSLLRALLSS--HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST---------- 227
           D E + S LR    S  +Q  L  ++ L    A+ Q +LN  E +V              
Sbjct: 165 DSELEESALRIEQQSQAYQDTLNNIRTLENSMAIVQKELNMLEDVVKTGAVAEVELLKLK 224

Query: 228 ---LELRENIHEQKNMLRHINELYDE---------------ANLEFANYLKEISRDLEQN 269
              ++L+ +I   K + +     Y E               A  +    + E++R L+++
Sbjct: 225 RDYVKLQGDISSAKVLAQKQKAAYSESIADYRGIALDFRTKARGQLNEVVAELAR-LQES 283

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   AD++ +            ILSP+ GT+      S     +  +P+M++VP      
Sbjct: 284 QSAIADQLRR----------TEILSPVDGTVKDVLIRSIGGVVRPGEPIMELVPLDSRLI 333

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHY 355
           + A++ P+ I +VK G  ATV+F  Y
Sbjct: 334 VEARIAPQDIAYVKVGLEATVKFTAY 359


>gi|83312258|ref|YP_422522.1| membrane-fusion protein [Magnetospirillum magneticum AMB-1]
 gi|82947099|dbj|BAE51963.1| Membrane-fusion protein [Magnetospirillum magneticum AMB-1]
          Length = 443

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 75/351 (21%), Positives = 153/351 (43%), Gaps = 38/351 (10%)

Query: 17  LKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           + R+ ++++ G ++  I W+ +  +E+   ++GEI     + ++     GI+ +  V  G
Sbjct: 28  IARLMVMALSGALVVFILWASIGQLEVVSVATGEIAPSSQLKQLSHLEGGIVGEILVAEG 87

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            Q+  G PLLT +  ++T   DL ++S + L    +  +            LE A +S+ 
Sbjct: 88  DQVRAGQPLLTLQATKST--ADLGELSQRLLSLRFEILR------------LEAASDSKS 133

Query: 136 EQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRAL 191
           E     D L +Y     +       + +RS + +L       L+  D  ++ +   +   
Sbjct: 134 EIQFPADLLKQYPDLAKEA-----DAFFRSRRARLAS----ELSGADEQIKQRQQEINGF 184

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQ--QERIVY----KSTLELRENIHEQKNMLRHIN 245
            S  Q D   ++ L E+ A+S + L +  Q R V+    K   EL+  I+E ++ L   N
Sbjct: 185 RSRIQNDRHSLELLNEQIAISDDLLKKDLQNRFVHIDLLKQASELKGRINEAESALSRSN 244

Query: 246 ELYDEANLE----FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
               EA+ +     A + +E    L++ +R F++   +        ++  I +P+ G + 
Sbjct: 245 AALAEAHAQKAKVTAAFEEESRTQLDKARREFSELSQRTASFSDNLDRTVINAPVGGIVK 304

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
                +     +   P++ +VP      + AK+ P+ + +VK G  A V+ 
Sbjct: 305 KLYFVTQGGVIRPGAPVIDLVPSDDRLLVEAKLPPQNVGYVKVGDPAYVKL 355


>gi|83582770|ref|YP_425076.1| Type I secretion membrane fusion protein, HlyD [Rhodospirillum
           rubrum ATCC 11170]
 gi|83578086|gb|ABC24636.1| Type I secretion membrane fusion protein, HlyD [Rhodospirillum
           rubrum ATCC 11170]
          Length = 492

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 81/428 (18%), Positives = 167/428 (39%), Gaps = 38/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           L+ ++   GL  W+   P+  +V + G I+ E N   ++    GIIK+  V+ G ++ QG
Sbjct: 77  LIILVAFGGLGLWAATAPLSSAVGAPGTIVVESNRKTVQHLEGGIIKEILVKEGDRVHQG 136

Query: 82  TPLLTFEDIETTDLIDLKKV------SIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESR 134
            PL+    +ETT  +    V      + + L   +  E+     +    D++  A  +  
Sbjct: 137 DPLIR---LETTQALASAAVVSNQFETYQALEARLVAERDEQKTITFPPDLIAVAKLKPE 193

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             ++L    +      K     ++ + + +      +  + + R   + +       L  
Sbjct: 194 TAEILQAQQQQFDERHKSIEGQVAILQKRIAQSRQEIEGLKVQRQSKKRQ-------LEI 246

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q ++  ++ L  K    +  +   ER + +    L   +    + +    +   EA L+
Sbjct: 247 FQDEIVGLRELLAKGYTPRTRILAMEREMTR----LEGEVGTDTSSMARAEQAVGEAELQ 302

Query: 255 FANYLKEISRDLEQNQRTFADEMSKL----TILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                ++   D+    R    ++S+L    T+      +  +L+  AG I      +   
Sbjct: 303 IIQTRQQFREDVVGQLREVQTKLSELRERGTVATDVLSRTVLLASQAGVIQNLAVHTLGG 362

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  + LM+IVP      I A+++P+ I +V  G    VRF  +           I  I
Sbjct: 363 IIKPGETLMEIVPEDDRLVIEAQISPRDIDNVVPGMDTEVRFSAFN-------SRTIPII 415

Query: 371 DPIISQQD-----NNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
           D ++SQ       N   +  YY+  ++++D   +    + LR G P +V+      T+  
Sbjct: 416 DGVLSQVSADRFVNERDSSSYYKARIEVSDEELAKLGGLALRAGMPVDVMIKTGERTVLH 475

Query: 425 EIIHPITD 432
             + P+ D
Sbjct: 476 YFLKPLED 483


>gi|84685325|ref|ZP_01013223.1| type I secretion membrane fusion protein, HlyD family protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84666482|gb|EAQ12954.1| type I secretion membrane fusion protein, HlyD family protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 461

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 97/459 (21%), Positives = 186/459 (40%), Gaps = 85/459 (18%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + LL ++G  G  TWS+   I  ++ + G I +E N   ++ P  G+I+  +V+ G  + 
Sbjct: 45  LALLILVG--GFGTWSVTTDISGAIIAPGGIESEQNRQVVQHPDGGVIQSIEVKEGDIVE 102

Query: 80  QGTPLLTFEDIE---------------------------TTDLIDLKKVSIKNLRCHIDT 112
            G  L+  +  E                            TD I    + ++  R H D 
Sbjct: 103 AGDILVRLDPEELQSELTIVQNQLFELVARRGRLEAERDGTDEITFDDLIVEEARVHPD- 161

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLKMKLTR 170
              A +F++ +    ++ F+ R E L     +     S++   N GI++   +L+ +L  
Sbjct: 162 ---AQEFMDGQ----QRLFDQRRESLASETEQLRKRMSQISSQNEGIAAQQAALETQLRL 214

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK--NAVSQNDLNQQERIVYKSTL 228
           +    +N+  L  ++ +  +++ + ++D   ++    +   A++QN+    E  +    L
Sbjct: 215 ISEELVNKRSLLERNLVQSSVVLALERDKAALEGQSGELTAAIAQNEGRITE--IEIEIL 272

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +L +   EQ      I  L D    E          +L + +R    ++ +L I      
Sbjct: 273 KLGQARREQA-----IENLRDLGYQEL---------ELAERRRALIAQLGRLDIR----- 313

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
                +P++G I   Q F+     + +QPL+ IVP  +   I A+V P  I  +  G   
Sbjct: 314 -----APLSGAIHAMQVFAEREVIRSAQPLLYIVPQDQALVIGAQVDPIHIDEIHVGQEV 368

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT-QEYYEVILKITDLAFSDNNIE--- 404
           T+R   +     +    +I ++  I +    +  T + +Y V      +A  D  +E   
Sbjct: 369 TLRLAAF---DRRNTPELIGRVMTISADALTDENTGRSFYRV-----RIALEDGEVEKLP 420

Query: 405 ----LRNGFPAE-VLFTAKNTTLAQEIIHPITDNWPKIF 438
               L  G P E  L TA  + LA  ++ P+ D + K F
Sbjct: 421 EGTVLVPGMPVESYLRTADRSPLAY-LVKPLADYFNKAF 458


>gi|163747809|ref|ZP_02155148.1| type I secretion membrane fusion protein, HlyD family [Oceanibulbus
           indolifex HEL-45]
 gi|161378917|gb|EDQ03347.1| type I secretion membrane fusion protein, HlyD family [Oceanibulbus
           indolifex HEL-45]
          Length = 446

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 95/462 (20%), Positives = 183/462 (39%), Gaps = 73/462 (15%)

Query: 14  PASLKRMTLLSI------IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           P S+ R  +  I       G  GL  W+   P+  +V S G  +   +   ++    GII
Sbjct: 18  PRSITRQVIFGISLLVFAFGGFGL--WAFKAPLAAAVISQGSFVATGSNKIVQHLEGGII 75

Query: 68  KKFQVENGSQILQGTPLLTFED---IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           K+  VE G  +  G PLL  ++   + T   + L++V ++ +   I  E S  D L    
Sbjct: 76  KEILVEEGQDVEAGQPLLLLDETSALATERELFLRQVRLEAMEARILAEYSQKDVLAYPL 135

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + +   +     +LD         ++     ++ + +S+     R +  Y  +L+   K
Sbjct: 136 HLEKLRSDFNIASMLDGQEIVFDAATRQLQNDVNLLQQSINGLKERAQG-YEQQLN-ATK 193

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             L   +  S  K++ + K L               R  Y +   LR  + E    +  +
Sbjct: 194 IQLEILIEDSEAKEILLNKGLIR-------------RTEYNT---LRRAMAEATGQIGRL 237

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL-----TILEKTREQKTIL------ 293
                E       Y  +I + +++ Q    DE+  +     +I E+TR+ + IL      
Sbjct: 238 ESEIKETQALSMRYESQIEQTIDERQAAALDELQVVQSELESIREQTRKAQGILHRAEIV 297

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P++GT+V     ++    +  + +++I+P  +   I  ++   +I  V+KG  ATVR  
Sbjct: 298 APVSGTVVRMHYHTAGGVIESGKAILEILPTGEPLIIEVQIPRAEIDVVRKGQEATVR-- 355

Query: 354 HYADIREKKFKAIIEKIDPIISQQ-----------DNNLQTQEYYEVILKITDLAFSDNN 402
                      A+ ++  PI+  Q             N   QE Y     +  ++     
Sbjct: 356 ---------LTALNQRTTPILEGQVYYVSADAILDRANDVPQEIY-----VARVSVPPRE 401

Query: 403 IELRNGF------PAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           ++   GF      PAE++ T ++ T  Q ++ P+TD+  + F
Sbjct: 402 LDRVRGFTPTPGMPAEIMITTQDRTFIQYLMKPVTDSMIRAF 443


>gi|254797259|ref|YP_003082101.1| secretion protein, HlyD family [Neorickettsia risticii str.
           Illinois]
 gi|254590501|gb|ACT69863.1| secretion protein, HlyD family [Neorickettsia risticii str.
           Illinois]
          Length = 499

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 103/465 (22%), Positives = 193/465 (41%), Gaps = 82/465 (17%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + L+   GI G+  W++  PI+ +  + GEI+   +   ++    GII++  V  G  + 
Sbjct: 68  VVLIGFFGIFGM--WAVFAPIDGASLAMGEIVISSDKKSVQHLEGGIIEEIFVHEGDHVT 125

Query: 80  QGTPLLTFEDIETT---DLIDLKKVSI----KNLRCHIDTEKSALDFLNNK---YDVLEK 129
           +G  L+T +++       +++  ++S+    + L  HI   K  ++  N +   Y   EK
Sbjct: 126 EGQVLMTLKNVGNKAQLSILEENQISLLATEQRLLAHIG-RKPNMELPNMEKLEYVTEEK 184

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             ++ + QLL F     S  +KV         R +  K+ +          ++N+   L+
Sbjct: 185 KNDTIKNQLLLFESNKESFANKV---------RIIDKKIGQ----------IQNEVLALK 225

Query: 190 ALLSSHQKDLTMM-------KNLFEKNAVSQNDLN--QQERIVYKSTLELRENIHEQKNM 240
           A L S +K + ++       ++L++++ + +  +   ++ERI +         I E K +
Sbjct: 226 AQLESAEKSVQLLEEELEAKRSLYDEHVIDKTKIVSLERERISWNG------KIAEYKAL 279

Query: 241 LRHINELYDEANLE-----------FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +    +   EA LE            A  LKE+S  + +N       M KLT       +
Sbjct: 280 IARGEQRVTEAELEKIQAENSFNSELAAQLKEVSHAIHEN-------MQKLTTAYDLMLR 332

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH------VK 343
             I +P AG +   +S S       +  LM+IVP ++  +I AKV P  I+       VK
Sbjct: 333 TIIRAPQAGIVTGLRSLSIGGVIPPAISLMEIVPENEDMFIEAKVAPNNIEAIASARLVK 392

Query: 344 K------GYTATVRFPHYADIREKKFKAIIEKIDPIISQQD--NNLQTQEYYEVILKI-- 393
           K      GY              KK   I++ +   IS     +      YY   ++I  
Sbjct: 393 KNLSEVDGYIGVKTRVKITAFNSKKV-GILKGVMTYISANTILDPRTGMHYYLAHIRIPK 451

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           +++A  +   +L  G PA V  T ++ +    ++ PI   +   F
Sbjct: 452 SEIAMINARTKLYPGMPAVVFITTESRSFLSYLLAPIIATFDTAF 496


>gi|261822157|ref|YP_003260263.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium wasabiae WPP163]
 gi|261606170|gb|ACX88656.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium wasabiae WPP163]
          Length = 442

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 86/461 (18%), Positives = 188/461 (40%), Gaps = 71/461 (15%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +  +R+   +++   LL + G    + W++  P++  V  +G ++   N   ++    
Sbjct: 11  MNQTARRDEKRAVRLGWLLVLAGFGSFLLWALFAPLDKGVMVNGSVVISGNRKVVQHNQG 70

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ K QV++G  +  G  LLT  +++                      +SA + L+ +Y
Sbjct: 71  GIVDKIQVKDGDSVEAGQILLTLNEVDA---------------------RSASEGLDGQY 109

Query: 125 DVL---EKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYR--------SLKMKLTRM 171
             L   E    + +++L D +   +      +     I+++ R        SLK++   M
Sbjct: 110 LQLVAREGRLLAEQQRLNDMVMTPRLQPIAERPEVSVITALQRDLLHSRQQSLKLEAEGM 169

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKD-------LTMMKNLFEKNAVSQNDLNQQERIVY 224
           R+       +E   S  R ++ S QK        L  +++L  +N V +N + + ER++ 
Sbjct: 170 RTSIAG---MEASLSAQRQVMFSKQKQRGTLEQQLEGLRSLAAENYVPRNKMLENERLLA 226

Query: 225 KSTLEL----------RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +   ++          R +I +Q  ++    + YD          KE++ +L + Q   +
Sbjct: 227 QLNGDIAQLAGDINRTRHDIEQQTLLIAQRQQEYD----------KEVNSELAEVQALLS 276

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           D  SK    +       I +P++GT+V  + F+        Q L++IVP  +   + A +
Sbjct: 277 DVGSKKEKADFNLANIQIRAPVSGTVVGLKVFTEGGVIAPGQTLLEIVPDDQPLRVDAHL 336

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILK 392
             + +  V  G    ++F  +      +    +E +  D ++ ++D +     YY + + 
Sbjct: 337 PVELVDKVWPGLPVELQFVAFNQSTTPRVAGTVELLSADRLLDERDGS----PYYSLRVM 392

Query: 393 ITDLA-FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           + D    +   +E++ G P +        +    +  P+ D
Sbjct: 393 VDDEGKRALEGLEIKPGMPVQGFVRTGERSFVNYLFKPLMD 433


>gi|88704023|ref|ZP_01101738.1| Secretion protein HlyD [Congregibacter litoralis KT71]
 gi|88701850|gb|EAQ98954.1| Secretion protein HlyD [Congregibacter litoralis KT71]
          Length = 461

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 94/433 (21%), Positives = 177/433 (40%), Gaps = 63/433 (14%)

Query: 17  LKRMTLLSIIGIIG--LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           L+   LL  I ++   L+ WS    I+      G+++    V  I S   G+I++  +  
Sbjct: 49  LRARGLLYGIALVAVLLLIWSAFAEIDTVTRGQGKVIPSQQVQVIGSQDGGVIREILISE 108

Query: 75  GSQILQGTPLLTFEDIETT-----DLIDLKKVSIKNLRCHIDTEKSALD----FLNNKYD 125
           G  +  G  LL  +   +      + ++L+ +SIK  R     E +A       L    D
Sbjct: 109 GDAVQAGDLLLRLDQTRSQATLGENRVELRGLSIKASRLRAMAEGAAFTPTELMLRELPD 168

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V+E+     E+QL      Y S+           V + + ++    RS  L   +L+ + 
Sbjct: 169 VVEQ-----EDQL------YQSSLRS------RDVEKEIALEQLNQRSEELT--ELQARE 209

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           S L       Q++L + + +    AVS+ ++ + ER V ++  EL +   +   +   I 
Sbjct: 210 SQLSTEERLAQQELDVTRPMVASGAVSEVEILRLEREVNRARGELAQTRAQINRVTSAIA 269

Query: 246 ELYDEAN---LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE-------QKTILSP 295
           E     N   LEFAN  +E             + M+++  L +  E       Q  + +P
Sbjct: 270 EAQGRVNAVELEFANEARE----------QLTETMTRINALSEAAEGLSDRVKQTNVTAP 319

Query: 296 IAGTIVYNQSF--SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           ++GT+  NQ +  +        + ++++VP      +  +V P+ I  +  G  A V+  
Sbjct: 320 VSGTV--NQLYYNTVGGVVLPGRDIVELVPADDTLLLEVRVRPQDIAFLAPGQRANVKVT 377

Query: 354 HYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
            Y  +     +  +E+I  D ++ +  N      +YEV ++     F  ++  +  G   
Sbjct: 378 AYDFVVYGGLEGRVEQIAADTVLDEDGNA-----FYEVSVRTEQADFGPDS-PIIPGMTV 431

Query: 412 EV-LFTAKNTTLA 423
           EV + T K T LA
Sbjct: 432 EVDVITGKKTVLA 444


>gi|257094397|ref|YP_003168038.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046921|gb|ACV36109.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 462

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 79/430 (18%), Positives = 170/430 (39%), Gaps = 22/430 (5%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           NH  + +   L+   G  G + W+ L P++  V + G+++   N   +++   G+++   
Sbjct: 37  NHRRASRLGWLVVAFGFGGFLLWAGLAPLDQGVPTGGQVVVTGNRKAVQNLAPGMVQAIL 96

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKK-----VSIKNLRCHIDTE-KSALDFLNNKYD 125
           V++G ++  G  LL  +        ++ +     V     R   D E +S + F     D
Sbjct: 97  VKDGDEVRGGDVLLRLDPTMARSQYEVARSQWLVVKAAEARLLADVEGRSEIVF---PED 153

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +L ++ + R    +    +   +        ++++  +L    + ++ +   R   E ++
Sbjct: 154 LLRESDDPRAASAMSVQTQLLRSRRAGLQAELAAMKNTLAGLQSSVKGLEATRRAKEEQT 213

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            LL         +L  ++ L  +  + +N L++QER++ + +  + E++       + I 
Sbjct: 214 KLL-------LDELKGLRELAAEGYLPRNRLSEQERLLAQLSGAISEDLGNLGRTQQTIG 266

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E+          Y KE+   L + Q+      S+L  L        + +P  G IV    
Sbjct: 267 EIRMRMLARQQEYDKEVENGLAEAQKEATSLDSRLKGLAFELANTEVRAPSEGVIVGLSV 326

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +         PLM++VP ++   +  +V    I  V+ G    + FP +    ++    
Sbjct: 327 HTVGGVLAAGTPLMEVVPKNEPLRVDVQVPTTLIDKVRPGLPVEISFPAF---NQRTTPQ 383

Query: 366 IIEKIDPIISQQDNNLQTQ--EYYEVILKITDLAFSDNNI-ELRNGFPAEVLFTAKNTTL 422
           I  +   + +    + Q +   YY   + +T          E++ G PAEV       T+
Sbjct: 384 IAGEFVQVAADATTDPQGRIPPYYRGQVVVTADGMKKLKAHEIKPGMPAEVFIKTGERTM 443

Query: 423 AQEIIHPITD 432
              I  P+ D
Sbjct: 444 LNYIFKPLGD 453


>gi|127511445|ref|YP_001092642.1| HlyD family type I secretion membrane fusion protein [Shewanella
           loihica PV-4]
 gi|126636740|gb|ABO22383.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           loihica PV-4]
          Length = 441

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 84/427 (19%), Positives = 177/427 (41%), Gaps = 20/427 (4%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           +++R+T      +  L+ WSI   IE    + G+++   +   I+S   G +    V  G
Sbjct: 28  AIRRITFFIATAVFILLIWSIFTNIEEIAKAKGQVVPLGHRQVIQSQTGGTLASIAVAEG 87

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +  F   ++  L +  +    NL   I+   + L+     ++  +  F +  
Sbjct: 88  DLVQKGDLIANFVATDSQALKEELQSKQANLELKIERYTAFLEEREPDFNAYQLGFPALV 147

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q ++ L + +     +     S V +S + +L            +E + + L+  + S 
Sbjct: 148 AQHINALARMNQEKQAIIALSESDVAKS-EAELA----------SVEQEITPLKDQIRSV 196

Query: 196 QKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           ++ L MM ++ E+ AVS+  +  +QQ+   Y   L++ E    +  + R+I+    +   
Sbjct: 197 EQTLKMMNSVKEQQAVSKLRMLESQQKLDAYIRELKVLEG--RRSVLQRNIDNQEKQLAQ 254

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + A+   E+       Q      +++L   +   +Q  + SP+ G I    + S+ +  Q
Sbjct: 255 KQASLFNEVGEKRTDAQAELLGIVARLKSSDSLVQQNRVTSPVDGIIQSIPNNSAGSVIQ 314

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               +  IVP +    + AK++P+ I  V  G  A ++   +   R      +++KI P 
Sbjct: 315 PGGTVAVIVPTTPTALLEAKLSPRDIGFVTVGQKARIKIDAFDYSRYGAIDGLVKKISP- 373

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               D + +   +Y+V + I    F D  + + L  G   E      + T+ Q +  P+ 
Sbjct: 374 --STDADEKGGVFYKVQIAIDKPYFGDQPDKLALIPGMTGEADIVTGDKTVFQYLWKPVF 431

Query: 432 DNWPKIF 438
            N  + F
Sbjct: 432 TNVTEAF 438


>gi|194292186|ref|YP_002008093.1| type I protease secretion protein, haemolytica toxin secretion prte
           family (hlyd) [Cupriavidus taiwanensis LMG 19424]
 gi|193226090|emb|CAQ72037.1| Type I protease secretion protein, haemolytica toxin secretion prtE
           family (hlyD) [Cupriavidus taiwanensis LMG 19424]
          Length = 460

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 85/414 (20%), Positives = 169/414 (40%), Gaps = 36/414 (8%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
           +++ +I  + W+ L  ++      G+++    V  +++   GI+ +  V  G  + +  P
Sbjct: 50  AVVFVIVALGWAALARVDEVTVGEGKVIPSSQVQVVQNLEGGIVAQILVRPGQVVSKDQP 109

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNN-KYDVLEKAFESREEQLL 139
           L+  +D   T      +     L   I     E +  DF+ + + D   + F + E  L 
Sbjct: 110 LMRIDDTRFTASYQEGRTKDDALVARIARLSAEAAGTDFVASAEGDGDARRFVAEERSL- 168

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ--- 196
            F+ + H+  + +      +V R    +          R +L  K S  + L  SH+   
Sbjct: 169 -FVSRKHALDANL------AVLRQQSEQ---------RRQELAEKRSREQQLRQSHRLVA 212

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF- 255
           ++L MM+ +  +  VS  D+ + ER     T +LR  +   +  +  +   Y E+  +  
Sbjct: 213 QELAMMRPMVAQGVVSDVDVLRLER----QTNDLRGELDASRLAMPRLEAAYRESQQKLD 268

Query: 256 ---ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              A++  E  R+L Q +   A   +  T L+   ++  + +P+AG +   +  +     
Sbjct: 269 EASAHFRAEAMRELNQAKAEQAALSATNTALQDRVDRTVVRAPLAGIVKQLKVNTVGGVV 328

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           Q    L++IVP      + A+V P  I  ++ G  A V+   Y       F   +E I  
Sbjct: 329 QPGMDLVEIVPLEDTLLVEARVRPADIAFLRPGQPAVVKLSAYDFSVYGGFAGTVEHISA 388

Query: 373 -IISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEV-LFTAKNTTL 422
             ++ +    + + YY V ++  D   A S   + +  G  A V + T + T L
Sbjct: 389 DTLTPERPGERPESYYLVRVRTRDNRPAGSAVQVPILPGMVATVDVLTGQKTVL 442


>gi|58584567|ref|YP_198140.1| membrane-fusion protein [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58418883|gb|AAW70898.1| Membrane-fusion protein [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 481

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 94/446 (21%), Positives = 172/446 (38%), Gaps = 35/446 (7%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P       +L   GI G+  WS + PI+ +V +SGE++   N   I+    GII K  V+
Sbjct: 47  PLFFGLAVILIFFGIGGI--WSAVAPIDGAVHASGEVIVSSNRKVIQHLGGGIISKILVK 104

Query: 74  NGSQILQGTPLLTFEDI-ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            G  + +G PL+   D+ E  +L  +K    + L   + TE + L  +   +D +E   E
Sbjct: 105 EGQVVKKGEPLVLLSDVNERANLSIIK----EKLLSLLVTE-ARLIAIRGDFDTVEFPDE 159

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            ++    +   K      K+ N    S+     +   R++ ++   + L ++   +    
Sbjct: 160 VKKLSNDELANKVMKNQIKLLNSQRKSILGKTDILQQRIKQLHNELVGLNSQLGAVFKQY 219

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +   ++L   + L     + +  +   E    K   E+   +   +  +  + +   E  
Sbjct: 220 NLIAEELETKRKLLINGHIGKPHILALE----KQFAEIEGKVGYYRAAISQVQQKIGENE 275

Query: 253 LEFANYLKE----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           LE  N   +     + +L++   + AD   +L + E    +  I SP  G +   +  + 
Sbjct: 276 LEIINVKNDSQERANTELKEVDTSIADLKERLMVAEDALARTVIRSPQDGIVTDIRYHTE 335

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFP 353
               Q   P+M IVP +    I AK+  + I+ +                KG    VR  
Sbjct: 336 GGVIQSGVPIMSIVPSNDDLIIDAKIQTRNIEEIISAQKKDSNIVSIDGLKGLKVKVRLS 395

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAE 412
            Y+  R      I+  I P      ++ +   YY V + I         N+ L  G PAE
Sbjct: 396 AYSSRRLSLINGIVSHISP---DALDDPRLGRYYSVRVVIPKSELVQFKNVYLYPGMPAE 452

Query: 413 VLFTAKNTTLAQEIIHPITDNWPKIF 438
           V    ++ TL   +  PI     + F
Sbjct: 453 VYIVTQSRTLLSFLFMPIIATVDRSF 478


>gi|294011752|ref|YP_003545212.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292675082|dbj|BAI96600.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 460

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 89/442 (20%), Positives = 176/442 (39%), Gaps = 45/442 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++  T+++++  +  + W+    ++ +  + G +        ++    G++    V+ G 
Sbjct: 34  MRAGTIVAVLFFVLFLGWAAFARLDAAAYAPGRLTVAGQRQSVQHRDGGVVGAIFVKEGQ 93

Query: 77  QILQGTPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLN--NKYDVLEKAF 131
            + QG PL+   D E      +   + + +K  R  +  E+S    +    ++D LE   
Sbjct: 94  HVGQGQPLMELADAEVRAQARMYGAQYIELKAQRARLIAEQSGASHVEWPAEFDALEGQE 153

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +    + +          S V     + V R    ++ +    Y ++L   ++ + L   
Sbjct: 154 QDDAREAIRLQQTQFDARSSVLA-AQTGVLREQANQVQQTTRGYRSQLAASSEQARLIG- 211

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDE 250
                ++L  ++ + EK  VS++ +   ER         R ++H Q+      I     E
Sbjct: 212 -----EELESLRGVAEKGFVSKSRIRALERA--------RADLHGQEGQFSASIARSGAE 258

Query: 251 ANLEFANYLKEISRDLEQNQRTFAD----EMSKLTILEKTREQK------TILSPIAGTI 300
           A     N LK +  +    +R  ++    E S   +L K R  K       I +P AGTI
Sbjct: 259 AG---ENRLKALEAEKAYRERAASELRDVEFSLNEVLPKYRAAKDQLARLQIRAPAAGTI 315

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V    F+        Q LM IVP      I A+++P+ I  +K G  A ++F   + + E
Sbjct: 316 VGLNVFTVGGVIAAGQKLMDIVPDRAGLVIEARISPEDIDDLKVGQRAQIKF---SSLHE 372

Query: 361 KKFKAIIEKIDPIISQ--QDNNLQTQEY-YEVILKITDLA----FSDNNIELRNGFPAEV 413
           +    +  +I  + +   QD       Y  E+I+   +LA        +  L+ G P ++
Sbjct: 373 RDLPIMDGRISRLSADSFQDEKTGMSFYTAEMIVPPRELARIRDVRGEDFSLKAGMPVQL 432

Query: 414 LFTAKNTTLAQEIIHPITDN-W 434
           L   +  T  Q  + P+T + W
Sbjct: 433 LVPLRRRTALQYALEPLTQSLW 454


>gi|149188795|ref|ZP_01867086.1| type I secretion membrane fusion protein, HlyD [Vibrio shilonii
           AK1]
 gi|148837456|gb|EDL54402.1| type I secretion membrane fusion protein, HlyD [Vibrio shilonii
           AK1]
          Length = 435

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 97/427 (22%), Positives = 178/427 (41%), Gaps = 22/427 (5%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +K   +L+++ + G + WS  + +  +  + G ++ E     ++    G +K+  V  G 
Sbjct: 9   IKSGIVLTLLTVFGFVWWSTSVELSSASIAKGVVVVESKRKPVQHLEGGYVKQIFVREGQ 68

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G  L+   +       D +++ +K +   ++ +K  L  L  +  V++ +   R E
Sbjct: 69  HVEVGEVLVELSNSRAE--ADFQRLDLKLM--SLEFQKRRLKALLEERSVVDWSMGDRTE 124

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR---LDLENKSSLL--RAL 191
              + + +     + V N  +      LK +L++ +  YL R   LD + +      RA+
Sbjct: 125 LATNTIERTQILSNIVSNEQVQFQQALLKSELSQGQ--YLQRKALLDEQVRGGQFQKRAV 182

Query: 192 ---LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              LS  ++++ M K L +K  VS+  + + +R + +   EL E   + +  LR +N L 
Sbjct: 183 ERQLSLVKQEIDMTKGLVDKGYVSKTRMLELQRALARIDAELAEVNADIEVGLRQLNALE 242

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                +     +  + +L   Q+   D    L      RE+ TI S   GT+V       
Sbjct: 243 QTHKAQRLEQQQSYAAELASTQKEARDVKEALKAASDVRERVTIRSEHQGTVVGVNIAGV 302

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK---KFKA 365
                    LM+IVP S    I A V P+ I  V+ G  A VR   Y +IR+      + 
Sbjct: 303 GAVVNPGDILMQIVPDSDELIIEALVPPQDIDVVRVGLEAKVRLSAY-NIRKTPPVDGEV 361

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
                D +    D+N+     Y+V +++   A     NIEL  G   EV    +  TL  
Sbjct: 362 TYVAADRLGDDADDNVVG---YKVQVRLNAEALHQLENIELYPGMQTEVFIVLEQRTLWD 418

Query: 425 EIIHPIT 431
            +  P+T
Sbjct: 419 YLTAPLT 425


>gi|227113344|ref|ZP_03827000.1| putative type I secretion protein [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 389

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 91/420 (21%), Positives = 166/420 (39%), Gaps = 75/420 (17%)

Query: 23  LSIIGIIGLITWSILLPI-EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LS++G+I    W+    + E+SV S G++        I+S   GII +  V+ G+ + +G
Sbjct: 23  LSLLGLIAFFIWATFAVLDEVSVGS-GKVTPSTRAQVIESLDGGIIGQIYVQQGNVVEKG 81

Query: 82  TPLLT-----FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
             L       F+ +       ++ +     R H +   + L F  ++  + E A  +RE 
Sbjct: 82  QVLAQLDINRFQSVYGEAFSRVQTLRASAERLHAELSGAPLTF--SEETLKEPALAARER 139

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           QL      Y S                      R+R+      +L+    L+       +
Sbjct: 140 QL------YES----------------------RLRNRDETVANLQQSMRLV-------E 164

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L M + L ++ A S  ++           + LR  I E +  +       DEAN ++A
Sbjct: 165 QELRMTEPLVQRGAASAVEV-----------IRLRRQISEIRGKI-------DEANNQYA 206

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ---KTILSPIAGTIVYNQSFSSSNYAQ 313
                  R  E+  +  AD  +++ ++    +Q    TI SP+ G +   Q  +     Q
Sbjct: 207 ------VRAREEQVKNNADLEAQMEVVSGKADQLKRATITSPVRGIVKDIQVTTVGGVLQ 260

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               LM+IVP      I  ++ P+ I +++ G  ATV+   Y           +E + P 
Sbjct: 261 PGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKITAYDASIYGNLTGEVESVSP- 319

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIHPI 430
            + QD   + Q YY V ++ T    ++N  E   +  G  A V       ++   +I P+
Sbjct: 320 DTLQDEVRRDQFYYRVYVRTTQAELTNNAGEKFPIVPGMVASVEIKTGQKSVMDYLIKPL 379


>gi|148976218|ref|ZP_01812942.1| secretion protein, HlyD family [Vibrionales bacterium SWAT-3]
 gi|145964312|gb|EDK29567.1| secretion protein, HlyD family [Vibrionales bacterium SWAT-3]
          Length = 463

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 99/446 (22%), Positives = 184/446 (41%), Gaps = 46/446 (10%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + ++  I  I WS    I+      G+++    +  +++   G++K+  
Sbjct: 27  NTPTSARIMLWMIVLFFIAAIGWSAWAEIDKVTVGQGKVIPSSQIQVVQNLEGGLVKEIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G Q+ +G  LL  +D         ++  + NL  ++    ++L  +    D  EK +
Sbjct: 87  VKEGQQVQKGQQLLLIDDTRFRSDFREREQQVANLTANVLMLSASLTSVVINEDFNEKEW 146

Query: 132 E---SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-----DLEN 183
           +   + +   L F  K++     + N    + YR     L    S++  ++     DL  
Sbjct: 147 KKSVTLDYGKLAFPPKFYEVQPDLVNRQ-KAEYRQDLNNLKNQLSVFDQQVEQKQQDLVE 205

Query: 184 KSSLLRALLSSHQ---KDLTMMKNLFEKNAVS-------QNDLNQQERIVYKSTLE---L 230
             + +R L  S+Q   ++L + K L ++  V        Q  +N   R +  S L+   L
Sbjct: 206 IKARVRNLKQSYQFARQELDITKPLADEGVVPRIELLKLQRQVNDTRREMTSSELKIPLL 265

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKT 286
           R  I E   ML  I+           N+  E    L Q Q    D++S LT     LE  
Sbjct: 266 RSAIKEA--MLSRIDAAL--------NFRSEQQEKLNQAQ----DKLSALTESAVGLEDR 311

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  ++SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++   
Sbjct: 312 VNRTVVVSPVTGTVKTLGINTVGGVIQPGMDIVEIVPTEDSLLVEAKIAPQDIAFLRPEL 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIEL 405
           TA V+F  Y   +    + ++E I    +Q +   +   +Y V ++     F  N  + +
Sbjct: 372 TAIVKFSAYDFTKYGGLEGVLEHISADTTQDE---EGNSFYIVRVRTEKHNFGQNEELPI 428

Query: 406 RNGFPAEV-LFTAKNTTLAQEIIHPI 430
             G  A V + T K T L + ++ PI
Sbjct: 429 IPGMTASVDIITGKRTVL-EYMLKPI 453


>gi|92118446|ref|YP_578175.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
 gi|91801340|gb|ABE63715.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
          Length = 447

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 98/454 (21%), Positives = 178/454 (39%), Gaps = 86/454 (18%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           I+G   W    PI  +V +SG  +       I+    G+I    V  G  +  G  L+  
Sbjct: 34  IMGFGVWGNTAPIAGAVVASGVFVATGQNKTIQHLEGGVISDIMVHEGDTVEPGQILVKL 93

Query: 88  EDIETTDLIDLKKVSIKNLR-CHIDTEKSA-----------LDFLNNKYDVLEKAFESRE 135
           +   TT   +++++ ++N R   +D    A            D   +  D   ++  S  
Sbjct: 94  D--RTTAKAEMQRLFLRNARLTAVDARLQAQVREEAEVNFPPDLAPDSKDPQIRSIVS-- 149

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSL-------KMKLTRMR-SIYLNRLDLENKSSL 187
            QLL F  + ++T S++   GI    ++L       K++L  +R  I L   D++ K  L
Sbjct: 150 AQLLAFTAQRNNTNSEI--AGIEDSIKALNERIAGSKVQLAGVRRQIALVEEDIKTKEHL 207

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH---EQKNMLRHI 244
           L A L      L + +N        Q +L  +   +     + +E I    EQ N +R  
Sbjct: 208 LAAGLVRKPDVLLLQRN--------QANLEGEVGRIMGDIGDAKERIARAVEQINGVRKT 259

Query: 245 N-----ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                 E   EA  E  +  + +              +S   +L++T    TI +P+ G 
Sbjct: 260 AIKTAVEQMHEARGELVDVRERM--------------LSARGVLDRT----TIRAPVKGV 301

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +V  +  +     +  +P+M+++P ++   I A+V P+ I  VK G  A VR        
Sbjct: 302 VVKLRFHTRGGVVEPGKPIMELLPLNEPLIIEARVRPQDIDSVKHGQEAMVR-------- 353

Query: 360 EKKFKAIIEKIDPIIS--------------QQDNNLQTQEYYEVILKITDLAFSD-NNIE 404
                A+ +++ P++S              ++   L   + Y V +++ +   +  +   
Sbjct: 354 ---LTALSQRVTPMVSGDVIYLSADTVADEKKSQQLGPSDIYVVRVRLHNSEVAAIHGFN 410

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
              G PAEV       T  Q I+ PI D+  + F
Sbjct: 411 PTPGMPAEVFIKTSERTFFQYIMKPIEDSMSRAF 444


>gi|114706017|ref|ZP_01438920.1| ABC transporter, membrane spanning protein (bacteriocin)
           [Fulvimarina pelagi HTCC2506]
 gi|114538863|gb|EAU41984.1| ABC transporter, membrane spanning protein (bacteriocin)
           [Fulvimarina pelagi HTCC2506]
          Length = 440

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 93/436 (21%), Positives = 172/436 (39%), Gaps = 52/436 (11%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
           +I+ ++G   WS+   +  +V + G++     V E++    GIIK+  VE GS I  G  
Sbjct: 33  AILLVVGCGGWSVQAKLSGAVIAQGQVTVRTQVKEVQHRDGGIIKEILVEPGSTIEAGDV 92

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           LL  ++ +T   + + +  +  LR      K+ L  +  +    E   E   E       
Sbjct: 93  LLRLDETQTRAELGVLRSQLAELRGR----KARL--IAERDGAAEVVVERDAE------- 139

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +T S+    G   ++   +      R     ++D    +  +RAL +  Q       
Sbjct: 140 --GNTISETILKGEQRLFGDNRATRDAQRKQLQAQID--QFAEQIRALEAQQQS------ 189

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           N  E+  V+ +DL++   +V +  +E       ++++ R ++ L  E     A    +IS
Sbjct: 190 NAAERALVA-DDLDRLMPLVRRQVVEASRTRTLERDIAR-LDGLTGEIAANIARVRGQIS 247

Query: 264 R------DLEQNQRTFAD-----------EMSKLTILEKTREQKTIL-SPIAGTIVYNQS 305
                  +L+Q  RT A            E+ +  +    R  +  L +PI+G +   + 
Sbjct: 248 ESELKIIELDQQVRTDAQRELRDVEGKIAELRERAVAALDRMDRMDLRAPISGIVNEVRV 307

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +       ++ +M IVP  +   + A+++P  I  V+ G TA +RF  +      +   
Sbjct: 308 HTIGGVIASAETVMTIVPEGEELVVEARLSPVDIDQVEPGQTAKLRFSAFNQHTTPEIAG 367

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN---GFPAEVLFTAKNTTL 422
            +E +    S   +    Q YY   + I D    D  I  R+   G P EV    K  T 
Sbjct: 368 TVEIVGAAASL--DQATGQAYYLATIGIPD----DTVISRRSLVPGMPVEVFLQTKERTA 421

Query: 423 AQEIIHPITDNWPKIF 438
              ++ P TD   +  
Sbjct: 422 LSYLVKPFTDQMQRAL 437


>gi|332289987|ref|YP_004420839.1| HlyD family secretion protein [Gallibacterium anatis UMN179]
 gi|330432883|gb|AEC17942.1| HlyD family secretion protein [Gallibacterium anatis UMN179]
          Length = 475

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 83/371 (22%), Positives = 158/371 (42%), Gaps = 42/371 (11%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + LL+II +I    W+IL  +EI  S+ G++        I+S  + I+K   V +G ++ 
Sbjct: 64  IMLLTIIAVI----WAILGKVEIVASAMGKLTYTGKSKVIQSVETAIVKGIFVRDGQKVT 119

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD---VLEKAFESREE 136
           QG  LL+   +      +  K ++K+ R  +   ++ L+ +  K     +L     + + 
Sbjct: 120 QGQRLLSLTTLGVEADFEKTKKALKDARLAVARNEALLEAMATKKSPTLILPNGLNTTDV 179

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR-----AL 191
            +++      +   + FN  I    R     L + R       + E +++L +      L
Sbjct: 180 DVVN----AQNLIEEQFNTYIKQ--REQAESLLKQR-------EAERETALYQVEKYQGL 226

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                  L  +K+L+EK+A+S++   +QE  V    +E+R  +  Q+N L  I      A
Sbjct: 227 EKIEAIRLNDLKSLYEKSALSKHSFFEQETKV----IEIRNELRSQQNKLVEIEASIKHA 282

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK----TILSPIAGTIVYNQSFS 307
              +   L    RD++   R   +++ +L   E+   Q+    +I SP+ GT+      +
Sbjct: 283 RDAYDLLLFSFRRDMQDALRQAREQVEQLVFEEQKLAQRQSTTSINSPVTGTVQQLNVHT 342

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH------YADI 358
                  +Q LM IVP      + A ++   I  ++ G   T++   FP+         +
Sbjct: 343 IGGVVTDAQNLMVIVPEEDKLEVTASISNSDIGFIEVGQPVTIKIEAFPYSRYGYITGTV 402

Query: 359 REKKFKAIIEK 369
           R   F AI +K
Sbjct: 403 RSVSFDAIEDK 413


>gi|304392979|ref|ZP_07374910.1| metalloprotease transporter [Ahrensia sp. R2A130]
 gi|303294977|gb|EFL89346.1| metalloprotease transporter [Ahrensia sp. R2A130]
          Length = 486

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 86/453 (18%), Positives = 185/453 (40%), Gaps = 66/453 (14%)

Query: 14  PASLKRMTLLSI------IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           P S+K  T+  I       G+ G   W+   PI  +  + G ++       ++    GII
Sbjct: 61  PTSVKSFTIFGIAIVILFFGVFG--GWATTAPISGAAVAPGTVVASGQNFRLQHFEGGII 118

Query: 68  KKFQVENGSQILQGTPLLTFEDIE---TTDLIDLK----KVSIKNLRCHID------TEK 114
           K+  V  G ++  G P+L+ +  +   T D++  +    +  ++ LR   D      T +
Sbjct: 119 KEIMVREGDRVEPGQPILSLDPTQAQATRDMVSNQLLAYQARVQRLRAERDNVDMGVTAE 178

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +A  F   +   +    E +E +    + +Y S   K+++  + ++   +         +
Sbjct: 179 AAEKF---RAAGMAGDLEEQEREFDKRVARYESEA-KIYDQQMLALEEQIS-------GL 227

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            + R+ ++ +       + +  ++LT  K L ++    +++            L L+ N 
Sbjct: 228 EIQRISVKEQ-------MENLTQELTAKKRLVDRKLTPRSEY-----------LRLKRNY 269

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL-----TILEKTREQ 289
            E +  L  +      A    A  L++ SR           E++ +     +++E+ R  
Sbjct: 270 SELEGRLGALTSDVGRAKSSIAEALEQKSRLTAARSEQAVAELNNVRTEISSLVERRRAA 329

Query: 290 KTILS------PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           + +LS      P AGT+V     +     +  + +  I+P      + A+++P+    + 
Sbjct: 330 EEVLSRVILRAPAAGTVVSLNKNTPGAVVRAGEDIAVILPAGGELIVEARMSPRDGSIIS 389

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI-LKITDLAFSDNN 402
            G  A +RF   A +  +    +  ++  I +    + +TQE Y V+ LKI +   S  +
Sbjct: 390 VGQAAKLRF---ASLNTRTTPEVDSEVTYISADSVVDERTQEPYIVVRLKIPETLPSQID 446

Query: 403 I-ELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
           + E+  G P E      + T A+ +I P+ D++
Sbjct: 447 VSEIYAGMPVESYVVTGDRTFAEYVIRPLVDSF 479


>gi|152985262|ref|YP_001347108.1| metalloprotease secretion protein [Pseudomonas aeruginosa PA7]
 gi|150960420|gb|ABR82445.1| metalloprotease secretion protein [Pseudomonas aeruginosa PA7]
          Length = 443

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/418 (17%), Positives = 171/418 (40%), Gaps = 20/418 (4%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L ++G +G + W+ L P++  V  SG+++   +   ++ P  G+++  +V  G ++  G 
Sbjct: 31  LVLLGFVGFLLWAGLAPLDKGVGVSGKVMVAGSRKAVQHPTGGLVRHIRVHEGERVEAGQ 90

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            LL  +  +        +     L        ++L  L+ + D  EKA      +LL   
Sbjct: 91  VLLEMDATQA-------RAQADGLFAQYLAALASLARLSAERD--EKARIEFPAELLAVD 141

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRA---LLSSHQKD 198
                T  +       S  R+L+++L  +  ++  ++  L+   + LR+     ++ ++ 
Sbjct: 142 DPRLPTLLEQQRQLRDSRRRALRLELDGLAETVAGSQAQLDGLQAALRSKEQQRAALEEQ 201

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  ++ L  +  V +N L   ER++ +   E+  ++    +  R I EL          +
Sbjct: 202 LRGLRQLASEGYVPRNRLLDSERLLAQVNGEIAGDLGSLGSTRRQILELRLRMAQRREKF 261

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            +E+   L   Q    +  ++L           + +P+AG +V  + F+        Q L
Sbjct: 262 QEEVRASLADAQVRAEELRNRLASARFDLANSEVRAPVAGLVVGQEVFTEGGVIAPGQQL 321

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQ 376
           M+I+P  +   + A++  + +  V+ G    + F  +      +    +  +  D ++ +
Sbjct: 322 MEILPERQPLLVDARLPVEMVDKVRVGLPVELMFSAFNQSTTPRVAGEVTLVSADRLVDE 381

Query: 377 QDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           +        YY + +++ +        +E+R G P E    +   +L   +  P+TD 
Sbjct: 382 RTEA----PYYRMRIRVGEEGVRRLAGLEIRPGMPVEAFVRSGERSLLNYLFKPLTDR 435


>gi|296274056|ref|YP_003656687.1| HlyD family type I secretion membrane fusion protein [Arcobacter
           nitrofigilis DSM 7299]
 gi|296098230|gb|ADG94180.1| type I secretion membrane fusion protein, HlyD family [Arcobacter
           nitrofigilis DSM 7299]
          Length = 478

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 102/450 (22%), Positives = 182/450 (40%), Gaps = 65/450 (14%)

Query: 13  HPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            P  L  +  L II    + I W+    I+      G+++  D + +I+S   GII +  
Sbjct: 51  SPTKLANVLFLFIISFFTIAIIWAAFAEIDELARGQGKVIPTDKIQKIQSLDGGIISEIL 110

Query: 72  VENGSQILQGTPLLTFEDIETT-----------DLIDLKKVSIK-NLRCHIDTEKS---- 115
           V+ G  + +GTPL+    I+TT           + + L  V ++  +  +ID  K     
Sbjct: 111 VKEGQVVKKGTPLMK---IDTTRFQATLEESKQEYLSLLAVKVRLEVESNIDINKELPTL 167

Query: 116 --ALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
               + +N+  +YD+LEK+       L++   +  S+  KV    +    + LK      
Sbjct: 168 VFPKEVMNDPSRYDILEKSL------LVNRFNELKSSV-KVLENQVGQKEQELK------ 214

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                   ++EN    L    +  ++    ++ L  +   S+ DL   E+   K+T +L 
Sbjct: 215 --------EIENTIKNLSKSYNIIKEQRVTIQRLVNRGVKSKYDLLDVEKEYNKTTGDLE 266

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +   K     INE       +   +  E S+ L++   +     +K+   +    + T
Sbjct: 267 AALLSVKRSKLAINEAKSRITEKINTFKAEASKKLQETASSINKFEAKMVGDKDKVAKTT 326

Query: 292 ILSPIAGTI---VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           I SP+ G +    YN   +     Q    LM+IVP S +  + AK++PK I  +     A
Sbjct: 327 ITSPVDGIVKELYYN---TIGGVVQPGVDLMEIVPESDVLVVEAKISPKDIAFINPSQKA 383

Query: 349 TVR-----FPHYADIREKKFKAIIE-KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
            V+     F  Y  ++ K    IIE   D I+ ++    + + YY V++K        N 
Sbjct: 384 IVKITAYDFSIYGGLKGK----IIEISADSIVDKESK--EGKSYYRVLVKTNKNYLERNG 437

Query: 403 IELR--NGFPAEVLFTAKNTTLAQEIIHPI 430
           ++L    G  A V       T+   I+ PI
Sbjct: 438 VKLPIIPGMVATVDIITGKKTILDFILKPI 467


>gi|242280318|ref|YP_002992447.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio salexigens DSM 2638]
 gi|242123212|gb|ACS80908.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio salexigens DSM 2638]
          Length = 430

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 90/401 (22%), Positives = 156/401 (38%), Gaps = 35/401 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
            L I+  +  + W+    ++I   + GE++    V  ++    GII K  V  G  + +G
Sbjct: 21  FLCIVMCLAFLGWACYFQLDIVSQAEGEVIPSSRVKPVQHLEGGIIMKINVREGEMVAKG 80

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQL 138
             L+  E   +   +D  +V + +LR +I     E   L   +   D+ EK     E  L
Sbjct: 81  QELVVLEATASDSTVDELEVRVTSLRVNIARLSAEDQGLKAPDYPKDIYEKFPALIERSL 140

Query: 139 LDFLGKYHSTCSKVFN--YGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALL 192
             F  +     S + +    I    + +K   +R R    S+ L R  ++  + LL   L
Sbjct: 141 KLFQTRKARVESDLLSEREKIKQREQDIKQITSRQRNSRNSLKLLREQIKISAGLLEDGL 200

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEA 251
           +S  K L  +K   E    S  + +  +    +S L + + +I E +N            
Sbjct: 201 TSRYKHLGFLKE--ESKLKSSIEEDSAKLAKARSALAQAKADIGEIRN------------ 246

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMS-KLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                +YL  +  +L++ +R F DE+S +L   E    +  I SP+ G +      S   
Sbjct: 247 -----SYLASVREELQEARREF-DELSQRLRKFEDNLNRTIIRSPVDGVVKTLYVVSVGE 300

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +    +M IVP      I A++    I +VK G  A V+       R       +  I
Sbjct: 301 VVRPGMTIMDIVPAGDKLVIEARLPISDIGYVKDGQKAVVKLASSDAARFGNIDGKVVNI 360

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
            P     D  L    +Y V ++ TD  F +++      FP 
Sbjct: 361 SPDADSTDRGLT---FYRVRIE-TDKDFFEHDGNYYKLFPG 397


>gi|15965789|ref|NP_386142.1| putative toxin secretion transmembrane protein [Sinorhizobium
           meliloti 1021]
 gi|307311324|ref|ZP_07590967.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
 gi|307318857|ref|ZP_07598289.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|15075058|emb|CAC46615.1| Rhizobiocin secretion protein RspE [Sinorhizobium meliloti 1021]
 gi|306895578|gb|EFN26332.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|306899625|gb|EFN30253.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
          Length = 436

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 170/432 (39%), Gaps = 39/432 (9%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L++IG  G   W+    +  +V +SG  + + +V +++ P  G+I +  VE G  +  G 
Sbjct: 25  LALIGAAG--AWATTTQLAGAVVASGNFVVDSHVKKVQHPTGGVIGEILVEEGDWVKAGQ 82

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF- 141
            L+  +  +T            NLR  I T++  LD L  +   LE   + R E  L+F 
Sbjct: 83  VLMRLDPTQTK----------ANLR--IVTKR--LDELMARLARLEAERDDRGE--LEFP 126

Query: 142 -----LGKYHSTCS------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                  K  +  S      K+F Y   S        L R+  +      L+ +      
Sbjct: 127 TELKVRAKERAVASAINGESKLFEYRRRSREGRRSQLLERIVQLQHEIAGLDAQQQAYDR 186

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LR-ENIHEQKNMLRHINELY 248
            LS    ++  +++L E+  VS   LN+ E     +T E LR E I +Q      I E  
Sbjct: 187 GLSILDAEIASLRSLHERGIVSVQRLNELE--TRAATFEGLRGEKIAQQAQAAGRIAETR 244

Query: 249 DEANLEFANYLK-EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            +  L+    LK E+ R+L + Q    +   +    E    +  +L+P  G +      +
Sbjct: 245 LQI-LQIDEDLKTEVGRELREVQAQLGEFTERKIAAEDQLRRIDMLAPQGGIVHQLNVHT 303

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                  +  +M IVP S    I A++ P+ I  ++ G    +R   +      +    +
Sbjct: 304 VGGVISPADVVMSIVPDSDRLAIEARIRPQDIDQIQLGQDVVLRLSAFNQRTTPELGGSV 363

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEI 426
            +I   +++   +     YY V + +     +   ++E   G PAE        T    +
Sbjct: 364 SRIAADLTEDPRS--GLSYYVVRVAVPGAELARLGSLEPLPGMPAEAFIQTGQRTALSYL 421

Query: 427 IHPITDNWPKIF 438
           I P++D   + F
Sbjct: 422 IKPLSDQISRAF 433


>gi|294678908|ref|YP_003579523.1| hemolysin D [Rhodobacter capsulatus SB 1003]
 gi|294477728|gb|ADE87116.1| type I secretion membrane fusion protein, HlyD family [Rhodobacter
           capsulatus SB 1003]
          Length = 488

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/437 (19%), Positives = 187/437 (42%), Gaps = 42/437 (9%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +TL  ++G  GL  WS++  I  +V +SG+I  + +   ++ P  G++ +  V  G  + 
Sbjct: 73  VTLAVLVGGFGL--WSVVSSIAGAVIASGQIEVDQHRQVVQHPDGGVVAEIHVHEGDSVS 130

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSALDFLNNKYDVLEKAFE 132
            G  L+  +     DL+  ++  ++         R  ++ E++    +    ++LE A +
Sbjct: 131 AGQLLIRLDG----DLVRSERAIVEGQFFELLARRGRLEAERADAPEIRFHPELLEAA-Q 185

Query: 133 SREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           +R +  +L++   +     ++     +  V +  +    ++  I   R+  E + +L+  
Sbjct: 186 TRPDVAELVEGQRRLFEARAQTLRKALDQVTKRAEQTQAQIGGIEAQRIATEEQEALI-- 243

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                 ++L   + L +K     + +   +R       E+   + ++      + EL  E
Sbjct: 244 -----ARELADQQQLLDKGLAQASRVLALQREAASLAGEVGALVAQKAQAEGKVTELDLE 298

Query: 251 ANLEFANYLKEIS----RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           A L   +  +E +    RD+   +   A+    LT   +  E+  + +P+ G IVY  + 
Sbjct: 299 A-LRLTSQRREDAETELRDIGYRELELAERRRSLT---EQIERLDMRAPVGG-IVYAMTV 353

Query: 307 SSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           ++     + ++P++ IVP  +   + A+++P  I  V+ G    +RFP +A     +   
Sbjct: 354 TTPRAVIRAAEPVLYIVPQDRPLLVAARISPINIDEVRIGQPVALRFPAFASRTTPELFG 413

Query: 366 IIEKI--DPIISQQDNNLQTQEYY--EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            + +I  D +I +         Y+  EV+L   + A     ++L  G PAEV     + +
Sbjct: 414 QVTQISADALIDEASR----LSYFRAEVMLNPGE-ADKLGALQLLPGMPAEVYIRTGDRS 468

Query: 422 LAQEIIHPITDNWPKIF 438
               +  P TD + + F
Sbjct: 469 PLAYLTKPFTDYFTRAF 485


>gi|158339542|ref|YP_001520931.1| HlyD family secretion protein [Acaryochloris marina MBIC11017]
 gi|158309783|gb|ABW31399.1| HlyD family secretion protein [Acaryochloris marina MBIC11017]
          Length = 528

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 175/397 (44%), Gaps = 66/397 (16%)

Query: 25  IIGIIGLITWS----ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           I GI+G  + +     L  IE ++ ++G++  +  V EI+SP +G++K+ +VE G  + +
Sbjct: 58  IWGIVGAASAALAWACLFQIEEAIPATGQLEPKGAVKEIQSPVAGVVKEIKVEEGQLVKK 117

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK--YDVLEKAF--ESREE 136
           G  LL      T   I   +   +NL    D  +  L   +N    DV++ A    +R+ 
Sbjct: 118 GEVLLVLNRQGTRSEIQSLEHQRRNLVQVNDYYRQQLQGQSNAPLPDVIDSALINSTRDR 177

Query: 137 QLL---DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS------IYLNRLD-----LE 182
           Q L   + L +     ++ + +  +   + L+  LT+  S        +N+ D     +E
Sbjct: 178 QSLVAENKLYRAQLNGAQEWRHFSAEERQRLQSGLTQGSSSVAAAQARINQADKQLRQIE 237

Query: 183 NKSSLLRALLSSHQKDLTM-------MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
            +    +  L+S Q+ L +       ++  + K A+++    QQ+  V   T E+     
Sbjct: 238 VQLEQTKIQLASAQQTLALNQEIVQDIEEAYRKGAIARVQFKQQQNEVQTGTAEVSRLQQ 297

Query: 236 EQKNMLRHINELYDEANLEFANYL-------------------------KEISRDLEQNQ 270
           EQ  +LR + ++  E     A  L                          ++++ +  NQ
Sbjct: 298 EQIRLLRQLEQVGQEKQQAQAQALNTVATNQRELLDRIAANKKRISEIDSQLTKAIVDNQ 357

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY-AQQSQPLMKIVPHSKLTY 329
           RT AD  ++L   + T + + + +P+ G +V++   S+  + A  S+P++KIVP   L  
Sbjct: 358 RTIADLENRLQQAKLTLDYQELKAPVDG-MVFDLKPSTPGFVANASEPVLKIVPADNL-- 414

Query: 330 IRAKV--TPKQIQHVKKGYTATVR-----FPHYADIR 359
            +AKV  T K I  ++ G  A VR     F  + DI+
Sbjct: 415 -KAKVYITNKDIGFIQTGMAADVRIDSFNFSEFGDIK 450


>gi|255322853|ref|ZP_05363994.1| auxiliary transport protein, membrane fusion protein family
           [Campylobacter showae RM3277]
 gi|255300064|gb|EET79340.1| auxiliary transport protein, membrane fusion protein family
           [Campylobacter showae RM3277]
          Length = 427

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 88/437 (20%), Positives = 181/437 (41%), Gaps = 55/437 (12%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           ++G+ G+  W  + P+  +  + G+I    N   I+    G++ K  V++G  + +G PL
Sbjct: 20  LVGVFGI--WLGMAPLNSAAVAVGKIGVVSNKKIIQHLEGGVVDKIFVKDGDMVKEGAPL 77

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
                           V IKN+    +      +FL  +  V+    E++++   +   K
Sbjct: 78  ----------------VEIKNVALQSEMSVVRAEFL--RTSVIVSRLEAQKDDATEV--K 117

Query: 145 YHSTCSKVFNY-----GISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQ-- 196
           +     ++  Y     G  S++ + K  L   +SI   R+  LEN+     A++S+ Q  
Sbjct: 118 FSDEIKQIEGYKEAIDGQLSIFNAQKKLLDEEKSILKQRIKQLENQIKGANAIVSAKQDR 177

Query: 197 -----KDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                +++   + LF++   + V   DLN+++  V     E+     E   +   + E  
Sbjct: 178 IKSLNEEIKEWERLFKEQLADKVRLRDLNREKTAVEG---EIAAGKAEIARLNVQVTETQ 234

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +  L    + +++ + LE  +    D   +   L+   E+  + SP+ G++V     + 
Sbjct: 235 AQIILRDRTFKEDVLKKLEDAKTRLVDLQQRYNALKDQSERTIVKSPVEGSVVELAFHTI 294

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY----ADIREKKFK 364
               +  + +M IVP      + A++    I  V  G  A +RF  +    + + E K  
Sbjct: 295 GGVIRPGERIMSIVPDETDYVVEARLNVVDIDTVHVGQLADIRFSAFQHRPSFVMEGKVT 354

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLA---FSDNNIELRNGFPAEVLFTAKNTT 421
            +    D I   QDN      +Y++  ++T+     F  N+  +  G P EV+    + T
Sbjct: 355 YV--SADSI---QDN--AGHSFYDIKAELTEEGMKEFKRNDFFIVPGMPVEVMIKTGDRT 407

Query: 422 LAQEIIHPITDNWPKIF 438
           + + ++ P  D + + F
Sbjct: 408 MLEYVLKPFIDMFKRAF 424


>gi|190893051|ref|YP_001979593.1| protein secretion protein, HlyD family [Rhizobium etli CIAT 652]
 gi|190698330|gb|ACE92415.1| protein secretion protein, HlyD family [Rhizobium etli CIAT 652]
          Length = 446

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 92/447 (20%), Positives = 182/447 (40%), Gaps = 56/447 (12%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           LSI  + G+  W+    +  +V   G ++ + +V +I+ P  GI+ K  V     +  G 
Sbjct: 22  LSIALVCGIGGWAATTELSSAVIGEGVVIVDGDVKKIQHPTGGIVSKLLVAENDHVSAGQ 81

Query: 83  PLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            L+  +   T   + + + ++  L   R  +  E+   D           +FE  EE + 
Sbjct: 82  VLIRLDGTSTRAQLSIVESTLAQLYARRARLKAERIGAD-----------SFEV-EENIS 129

Query: 140 DFL----GKYHSTCSKVFNY----GISSVYRSLKMKLTRMRSIYLNRLDL--ENKSSLLR 189
           D +       ++T S+        G   ++ S K  L  M+S   +R D   E    L+ 
Sbjct: 130 DLMTSSAAASNTTASRNAAQDLLDGEQKLFDSRKSALVGMKSQLASRKDQLGEQIKGLVV 189

Query: 190 ALLSSH------QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML-- 241
            + +++      +++L  +  L++K  V+   LN  +R    +  EL+ N  ++      
Sbjct: 190 QINATNDSLGLIEQELEGVDALYKKGLVTLQRLNALKR----ARAELQGNSGQEIAAKAE 245

Query: 242 ---------RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                    R   +L ++   E A  L ++   + +N+      + +L  L+       I
Sbjct: 246 AEGKAIEIDRQSIQLDEDRRSEIAKELTDVEAKIAENEERRETALDQLRRLD-------I 298

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P++G +      + +   +  Q LM +VP +    ++AKV+ + I  +  G +  VRF
Sbjct: 299 TAPLSGRVHELAVHTVNGVIEPGQTLMLVVPENDDLTVQAKVSTRDIDQLHVGQSVDVRF 358

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPA 411
             +        +A I  I P I + +       YY + +K    + +   +I+L  G PA
Sbjct: 359 SAFDQRTTPDVRAEITSIAPDIVKDERT--GISYYPLRVKPESESLAKLKSIKLYPGMPA 416

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIF 438
           EV     + T+   +  P+TD    +F
Sbjct: 417 EVFIKIGDRTVISYLTKPLTDQMQHVF 443


>gi|144900517|emb|CAM77381.1| Type I secretion membrane fusion protein, HlyD [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 522

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 84/435 (19%), Positives = 173/435 (39%), Gaps = 64/435 (14%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L+++ I   I W+ +  ++    + GE++ E  V  I+    G+I++  V  G ++ +G 
Sbjct: 114 LAMLAIALFIVWANIARLDEVTIAEGEVVPEGKVKVIQHLEGGVIREIYVAEGDEVKEGA 173

Query: 83  PLLTFEDIETTDL--------IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA---- 130
           PLL   D+    +        +D   + +  LR  ++   +       K+   E+A    
Sbjct: 174 PLLQL-DLSAVAMNREELQVRVDGLNLQVARLRAELEGAATV------KFPAAEQARQPN 226

Query: 131 --------FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN----R 178
                   FE+R +        + ST + + +     +    ++   R+R++  N    R
Sbjct: 227 LVQAETRNFEARRQ-------AHKSTLTVLADQARQKMLEVQELD-ARLRAVTANLKLAR 278

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             L   + L+R+ L++  + + +             DL  Q   +  S    +    E K
Sbjct: 279 ERLAMSTDLVRSGLTAKMEHVQLQ--------AQTEDLEGQANTLRASIPRAQAAQAEAK 330

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           +              E ANY +    +L + +   A     +T     +++  I SP  G
Sbjct: 331 SRQEQ----------EEANYARTAQAELSEAELNLARTRELMTQASDQQQRTQITSPTDG 380

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            I   ++ +     +   P+M+IVP  +   I AK++P    +V+ G  ATV+   Y  +
Sbjct: 381 IIKNLRANTIGGVIRPGDPIMEIVPLHERLQIEAKLSPMDRGYVQPGQVATVKLSAYDYV 440

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN---GFPAEVLF 415
                +  +  + P  +   +N   Q +Y V++ +TD ++  +  + R    G  A V  
Sbjct: 441 VYGGLEGKVSLVAPDTTMGQDN---QPFYRVLV-LTDKSYLGDEADKRTITPGMVASVEI 496

Query: 416 TAKNTTLAQEIIHPI 430
              + T+ Q ++ P+
Sbjct: 497 HTGDRTVMQYLLKPV 511


>gi|15598601|ref|NP_252095.1| metalloprotease secretion protein [Pseudomonas aeruginosa PAO1]
 gi|107102938|ref|ZP_01366856.1| hypothetical protein PaerPA_01004007 [Pseudomonas aeruginosa PACS2]
 gi|218890396|ref|YP_002439260.1| metalloprotease secretion protein [Pseudomonas aeruginosa LESB58]
 gi|254236364|ref|ZP_04929687.1| metalloprotease secretion protein [Pseudomonas aeruginosa C3719]
 gi|254242091|ref|ZP_04935413.1| metalloprotease secretion protein [Pseudomonas aeruginosa 2192]
 gi|9949542|gb|AAG06793.1|AE004761_9 metalloprotease secretion protein [Pseudomonas aeruginosa PAO1]
 gi|126168295|gb|EAZ53806.1| metalloprotease secretion protein [Pseudomonas aeruginosa C3719]
 gi|126195469|gb|EAZ59532.1| metalloprotease secretion protein [Pseudomonas aeruginosa 2192]
 gi|218770619|emb|CAW26384.1| metalloprotease secretion protein [Pseudomonas aeruginosa LESB58]
          Length = 443

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/418 (17%), Positives = 170/418 (40%), Gaps = 20/418 (4%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L ++G +G + W+ L P++  V  SG ++   +   ++ P  G+++  +V  G ++  G 
Sbjct: 31  LVLLGFVGFLLWAGLAPLDKGVGVSGTVMVAGSRKAVQHPTGGLVRHIRVHEGERVEAGQ 90

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            LL  +  +        +     L        ++L  L+ + D  EKA      +LL   
Sbjct: 91  VLLEMDATQA-------RAQADGLFAQYLAALASLARLSAERD--EKARIEFPAELLALD 141

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRA---LLSSHQKD 198
                T  +       S  R+L+++L  +  ++  ++  L+   + LR+     ++ ++ 
Sbjct: 142 DPRLPTLLEQQRQLHDSRRRALRLELDGLAETVAGSQAQLDGLQAALRSKEQQRAALEEQ 201

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  ++ L  +  V +N L   ER++ +   E+  ++    +  R I EL          +
Sbjct: 202 LRGLRQLASEGYVPRNRLLDSERLLAQVNGEIAGDLGSLGSTRRQILELRLRMAQRREKF 261

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            +E+   L   Q    +  ++L           + +P+AG +V  + F+        Q L
Sbjct: 262 QEEVRASLADAQVRAEELRNRLASARFDLANSEVRAPVAGLVVGQEVFTEGGVIAPGQQL 321

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQ 376
           M+I+P  +   + A++  + +  V+ G    + F  +      + +  +  +  D ++ +
Sbjct: 322 MEILPERQPLLVDARLPVEMVDKVRVGLPVELMFSAFNQSTTPRVEGEVTLVSADRLLDE 381

Query: 377 QDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           +        YY V +++ +        +E+R G P E    +   +L   +  P+ D 
Sbjct: 382 RSEA----PYYRVRIRVGEEGVRRLAGLEIRPGMPVEAFVRSGERSLLNYLFKPLADR 435


>gi|288960452|ref|YP_003450792.1| type I secretion membrane fusion protein [Azospirillum sp. B510]
 gi|288912760|dbj|BAI74248.1| type I secretion membrane fusion protein [Azospirillum sp. B510]
          Length = 451

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 5/180 (2%)

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E++ DL+  Q + AD   +L   +    ++ + +P AG +   + F+          ++ 
Sbjct: 272 EVATDLQTAQASVADLSERLRGADDVLLRQAVTAPQAGRVTGLKFFTPGGVIPAGAGILD 331

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           IVP      + A+V+P  +Q+V+ G  A V+F  Y   R++    +  ++  + + Q  +
Sbjct: 332 IVPQDDAMIVEARVSPHDVQNVEVGSKAMVKFTGY---RQRAVPPVAGQVVSLSADQLED 388

Query: 381 LQTQEYYEVILKITDLA--FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            +T  +Y       D A   +  ++EL  G PAEV+            + P+TD   + F
Sbjct: 389 DRTGTFYFAARISMDAAELKALPSVELHPGMPAEVMIHGHARRAIDYFLTPLTDGLQRAF 448


>gi|225630268|ref|YP_002727059.1| secretion protein, HlyD family [Wolbachia sp. wRi]
 gi|225592249|gb|ACN95268.1| secretion protein, HlyD family [Wolbachia sp. wRi]
          Length = 530

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 180/451 (39%), Gaps = 45/451 (9%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + +L   GI G+  WS + PI+ +V +SGE++   N   ++    GII K  V+
Sbjct: 96  PLFFGLVVILIFFGIGGI--WSAIAPIDGAVHASGEVIVSSNRKIVQHLGGGIISKILVK 153

Query: 74  NGSQILQGTPLLTFEDI-ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
               + +  PL+   D+ E  +L  +K    + L   + TE   L  +    D LE + E
Sbjct: 154 ESQAVKKDEPLVLLSDVNEKANLSIIK----EKLLSFLATEARLLA-IRVDLDTLEFSDE 208

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            ++    + + K      K+FN    S+    K  + + R   LN    +  + L   L 
Sbjct: 209 VKKLSNDELVNKVIKNQVKLFNSQRKSILG--KTDILQQRIKQLN----DELAGLNFQLN 262

Query: 193 SSHQK------DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           ++H++      +L   + L +   +S+  +   E    K   E+   +   ++ +  + +
Sbjct: 263 AAHKQYDLITEELETKRQLLDSGHISKPHILALE----KQFAEIEGRVGHYRSAISQVQQ 318

Query: 247 LYDEANLEFANYLKE----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              E  LE  N   +     + +L++   + AD   +L + E +  +  I SP  G +  
Sbjct: 319 KIGENELEIINVKNDSQERANAELKEVSTSIADLKERLMVAEDSLARTIIKSPQDGIVTD 378

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV----KK-----------GYT 347
            +  +     Q   P+M +VP      I AK+  + I+ V    KK           G  
Sbjct: 379 IRYHTEGGVIQSGVPIMSVVPSDDDLIIDAKIQTRNIEEVLSAQKKDSNIVSIDGLEGLK 438

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             VR   Y+  R      I+  I P  +  D  L       V++  ++LA    N+ L  
Sbjct: 439 VKVRLSAYSARRLSLISGIVSHISP-DALDDPRLGRYYSVRVVIPKSELA-QFKNVYLYP 496

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G PAEV    ++ TL   +  PI     + F
Sbjct: 497 GMPAEVYIVTQSRTLLSFLFTPIIATVDRSF 527


>gi|253988089|ref|YP_003039445.1| alkaline protease secretion protein apre [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253779539|emb|CAQ82700.1| alkaline protease secretion protein apre [Photorhabdus asymbiotica]
          Length = 444

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 81/431 (18%), Positives = 180/431 (41%), Gaps = 38/431 (8%)

Query: 19  RMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+  L I +GI+G + W+   P++  V+SSG ++ + N   +++P SGII +  V  G  
Sbjct: 26  RLGWLVIGVGILGFLIWAAFAPLDKGVASSGVVVVDGNRKTVQAPASGIISQIMVVEGET 85

Query: 78  ILQGTPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           I  G  L+    ++     D I  +  +       +  E+   D L     + +   E R
Sbjct: 86  IKAGQTLVQLSQVQAKAQVDAIQDQLYTTLATETRLLAEQHGDDMLVFPEILQQLQSEPR 145

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL--RALL 192
            ++++    +  ++  ++    ++ + +S+     +++ +         K+SL+  R   
Sbjct: 146 VKEIIALQKQLFASRREMLQSDLAGLEQSVAGTHFQIKGL---------KASLVSKRVQQ 196

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           ++ ++ +T +K+L ++    +N   +    + +   EL  +I E +     + +   E  
Sbjct: 197 TALKEQMTNLKSLADEGYFPRNRYLE----LLREQAELNSSIAEMEGRAGQLEKQLQETQ 252

Query: 253 LEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A+Y +E+   L + Q   ++  +KL   +      +I++P+ GT+V    F+ 
Sbjct: 253 QRIIQRKADYQREVRTQLAEEQVAASEYRNKLDTAQFELMHTSIVAPVDGTVVGLNIFTQ 312

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII- 367
                  + LM+I+P+     +  +V       + KG    + F  +   R  K +  + 
Sbjct: 313 GGVVAPGEKLMEILPNQMALEVETRVAVNLADKISKGLDVDLMFTAFNQNRTPKIEGKVV 372

Query: 368 -----EKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
                  +DP+ S        Q YY++   ++         +++R G P EV     + +
Sbjct: 373 MVSADRLVDPVTS--------QPYYQMRAVVSPEGMEKLKGLDIRPGMPVEVFVKTGSRS 424

Query: 422 LAQEIIHPITD 432
           L   +  P+ D
Sbjct: 425 LLSYLFKPLWD 435


>gi|170739574|ref|YP_001768229.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium sp. 4-46]
 gi|168193848|gb|ACA15795.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium sp. 4-46]
          Length = 460

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 75/418 (17%), Positives = 173/418 (41%), Gaps = 19/418 (4%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           G++G   W+  + ++ +V S G ++ E +   ++    G++    V++G  + +G  LL 
Sbjct: 53  GVVG--GWAARVRLDRAVISPGVVVAETSRKVVQHFEGGMVLDVLVKDGQSVREGDVLLR 110

Query: 87  FEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            + +++    DL +  +     L   +  E+     L+   D++ +  E+    +   +G
Sbjct: 111 LDPLQSRASADLFRTQLDAALILEARLRAEQDGAADLDLPPDIVARRHEA---PIARAIG 167

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              S  ++       S+   L +   R+R + +    L  + + + A +    ++L  ++
Sbjct: 168 DQRSQLAERRK----SMRAQLDLIAARVRQLRVEMEGLAAERASVEAQVRYIDEELGGLR 223

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           +L +KN +  + L   ER   +    +  ++ E       I E   +         + ++
Sbjct: 224 SLRDKNLIPLSRLLMMERERTRLQGVIGRSVAETAKAENAIGEAGMQVTQIEQRRQESVT 283

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L + ++  ++   KL + +    +  + +P  G I   + ++     +  +PLM+IVP
Sbjct: 284 AQLLETRQKISELREKLLVAQDVLRRHEVRAPHGGVIQGLKVYTIGQVVRPGEPLMEIVP 343

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNL 381
                 I  + +P+ ++ V  G  A V+ P +   R       +  +  D +I +     
Sbjct: 344 TRDRLVISVQFSPQDLEAVHAGMRAEVKLPTFQTRRTPAIFGTLRTVSRDRLIDEATK-- 401

Query: 382 QTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             Q Y+  I++I +     D    L  G PAE++ +A   T    ++ P+ D   + F
Sbjct: 402 --QPYFAGIVEIDEHDVPGDVRDRLLAGLPAEIVLSAGERTALDYMVSPLFDAMGRAF 457


>gi|58699106|ref|ZP_00373938.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534377|gb|EAL58544.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 506

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 180/451 (39%), Gaps = 45/451 (9%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + +L   GI G+  WS + PI+ +V +SGE++   N   ++    GII K  V+
Sbjct: 72  PLFFGLVVILIFFGIGGI--WSAIAPIDGAVHASGEVIVSSNRKIVQHLGGGIISKILVK 129

Query: 74  NGSQILQGTPLLTFEDI-ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
               + +  PL+   D+ E  +L  +K    + L   + TE   L  +    D LE + E
Sbjct: 130 ESQAVKKDEPLVLLSDVNEKANLSIIK----EKLLSFLATEARLL-AIRVDLDTLEFSDE 184

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            ++    + + K      K+FN    S+    K  + + R   LN    +  + L   L 
Sbjct: 185 VKKLSNDELVNKVIKNQVKLFNSQRKSILG--KTDILQQRIKQLN----DELAGLNFQLN 238

Query: 193 SSHQK------DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           ++H++      +L   + L +   +S+  +   E    K   E+   +   ++ +  + +
Sbjct: 239 AAHKQYDLITEELETKRQLLDSGHISKPHILALE----KQFAEIEGRVGHYRSAISQVQQ 294

Query: 247 LYDEANLEFANYLKE----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              E  LE  N   +     + +L++   + AD   +L + E +  +  I SP  G +  
Sbjct: 295 KIGENELEIINVKNDSQERANAELKEVSTSIADLKERLMVAEDSLARTIIKSPQDGIVTD 354

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV----KK-----------GYT 347
            +  +     Q   P+M +VP      I AK+  + I+ V    KK           G  
Sbjct: 355 IRYHTEGGVIQSGVPIMSVVPSDDDLIIDAKIQTRNIEEVLSAQKKDSNIVSIDGLEGLK 414

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             VR   Y+  R      I+  I P  +  D  L       V++  ++LA    N+ L  
Sbjct: 415 VKVRLSAYSARRLSLISGIVSHISP-DALDDPRLGRYYSVRVVIPKSELA-QFKNVYLYP 472

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G PAEV    ++ TL   +  PI     + F
Sbjct: 473 GMPAEVYIVTQSRTLLSFLFTPIIATVDRSF 503


>gi|88607344|ref|YP_505600.1| HlyD family type I secretion membrane fusion protein [Anaplasma
           phagocytophilum HZ]
 gi|88598407|gb|ABD43877.1| type I secretion membrane fusion protein, HlyD family [Anaplasma
           phagocytophilum HZ]
          Length = 509

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 96/455 (21%), Positives = 187/455 (41%), Gaps = 59/455 (12%)

Query: 20  MTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           + ++++IG  G    W+ L P++ +V + GE+++  N   ++    GI+KK  V  G  +
Sbjct: 77  IGIVAVIGFFGCFGIWAALAPLDGAVIAPGEVVSSLNRQIVQHLEGGIVKKILVTEGETV 136

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRC------HIDTEKSALDFLNNKY-----DVL 127
            +  PL+          + + K  +  L         I +  + ++F +  +     DV+
Sbjct: 137 EKEQPLVYLNSTAAQANLGIIKEKLLVLLATEARLNAIKSHATTVEFPDEIFKLSSEDVV 196

Query: 128 EKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRM----RSIYLNRLDL 181
            K  E+++E    F  + +S   ++      I  +++ L    +++    +  +L   +L
Sbjct: 197 SKVLENQKEL---FFSQNNSITGQIQILRQRIKQLHQELAGLASQLEAEEKQYHLIDEEL 253

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E K SLL A   S       + NL   +A ++  L      +  +  ++ EN  E  N+ 
Sbjct: 254 ETKKSLLDAGYISK----PYLLNLERLHANAEGKLGHIRATIASTEQKIGENRLEIINI- 308

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
              N + D AN E           L++   T  D   +L   E   E+  I SP  G + 
Sbjct: 309 --TNTVMDRANAE-----------LKETASTITDLRERLRAAEDVLERTVIRSPQHGIVT 355

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGY 346
             +  +          +M++VP      I AK++ + I+ +                +G 
Sbjct: 356 GLKYHTEGGVIPPGGVIMEVVPIDDDFIIDAKISIRNIEEILSAQTVEENLVTSGEYRGL 415

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIE 404
            A VR   + +IR  KF  +   +  + +    +     YY + + I   + S    N++
Sbjct: 416 KAKVRLSAF-NIR--KFGLVNGIVTQVSADALADPHGMRYYSLRVVIPKSSHSGKFKNLK 472

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           L +G PAEV    ++ TL + ++ PIT  + K F+
Sbjct: 473 LYHGMPAEVFVVTRSRTLLEYLLTPITSTFEKAFK 507


>gi|75675156|ref|YP_317577.1| type I secretion membrane fusion protein, HlyD [Nitrobacter
           winogradskyi Nb-255]
 gi|74420026|gb|ABA04225.1| type I secretion membrane fusion protein, HlyD [Nitrobacter
           winogradskyi Nb-255]
          Length = 447

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 96/471 (20%), Positives = 189/471 (40%), Gaps = 88/471 (18%)

Query: 14  PASLKRMTLLSII----GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           P S + +TL  ++     ++G   W    PI  +V +SG  +       I+    G+I +
Sbjct: 16  PRSTRGLTLAGVVIVAVTVLGFGVWGNTAPIAGAVVASGVFVATGQNKIIQHLEGGMIDE 75

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF-----LNNKY 124
            +V  G  +  G  L+  +   T+   +++++ ++N R       +ALD      +  + 
Sbjct: 76  IKVREGDTVEPGQILVELD--RTSAKAEMQRLFLRNARL------TALDARLQAQVREET 127

Query: 125 DV---LEKAFESRE--------EQLLDFLGKYHSTCSKVFNYGISSVYRSL-------KM 166
           +V    E A +S++         QLL F  + ++  S +   GI    ++L       K+
Sbjct: 128 EVHFPPELASDSKDPQIRSIVNAQLLSFTAQRNNANSDI--AGIEDSIKALNERIAGSKV 185

Query: 167 KLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           +L  +R  I L   D++ K  LL A L    + L + +N        Q +L  +   +  
Sbjct: 186 QLDGVRRQIALIEEDIKTKEHLLAAGLVRKPEVLLLQRN--------QANLEGEVGRIMG 237

Query: 226 STLELRENIH---EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              + +E I    EQ N +R +              +K     + + +   AD   ++  
Sbjct: 238 DIGDAKERISRAVEQINGVRKV-------------AIKTAVEQMHEVRGELADVRERMQS 284

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +   ++ TI +P+ G +V  +  +     +  +P+M+++P  +   I A+V P+ I  V
Sbjct: 285 AKGVLDRTTIRAPVKGVVVKLRFHTRGGVVEPGKPIMELLPLDEPLIIEARVRPQDIDSV 344

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIIS--------------QQDNNLQTQEYYE 388
           K G  A VR             A+ ++I P++S              ++       + Y 
Sbjct: 345 KHGQEAMVR-----------LTALSQRITPMVSGDVIYLSADTVADEKKSQQTGPSDIYV 393

Query: 389 VILKITDL-AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           + +++ +    + +      G PAEV       T  Q I+ PI D+  + F
Sbjct: 394 IRVRLNNAEVVAIHGFHPTPGMPAEVFIKTSERTFFQYIMKPIDDSMSRAF 444


>gi|72383813|ref|YP_293167.1| Type I secretion membrane fusion protein, HlyD [Ralstonia eutropha
           JMP134]
 gi|72123156|gb|AAZ65310.1| Type I secretion membrane fusion protein, HlyD [Ralstonia eutropha
           JMP134]
          Length = 433

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 89/412 (21%), Positives = 165/412 (40%), Gaps = 41/412 (9%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +IGL+ W+ L  ++      G+I+    V  +++   GI+ K  V  G  + +  PL+  
Sbjct: 28  LIGLM-WAALARVDEVTVGEGKIIPSSQVQVVQNLEGGIVAKIMVRPGQVVARDQPLMRI 86

Query: 88  EDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKY-DVLEKAFESREEQLLDFLG 143
           +D   T      +     L   I     E   + F +    +   + F S E  L +   
Sbjct: 87  DDTRFTASYQEGRTKDDALVARIARLSAEAGGMPFDDGAATNAGTRGFVSEERSLFE--- 143

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQ---KDL 199
                          S  R+L+  L  +R      R +L  K S  + L  SHQ   K+L
Sbjct: 144 ---------------SRKRALEANLAVVRQQAEQRRQELAEKRSREQQLRQSHQLVSKEL 188

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---- 255
           TMM+ +  +  VS+ DL + ER       +L+  +   +  +  ++  Y E+  +     
Sbjct: 189 TMMRPMVAQGVVSEVDLLRLER----QANDLQGELEATRLAMPRLDAAYRESLKKIEELT 244

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            ++  E  +DL Q +     + +  T L+   ++  + +P+AG +   +  +     Q  
Sbjct: 245 THFRAEAMQDLNQAKAEQQAQSATNTALQDRVDRTLVKAPVAGIVKQLKINTVGGVIQPG 304

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPI 373
             L++IVP      + A+V P  I  ++ G  A V+   Y       F   +E I  D +
Sbjct: 305 MDLVEIVPLEDTLLVEARVRPADIAFLRPGQPAMVKLSAYDFSIYGGFPGTVEHISADTM 364

Query: 374 ISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEV-LFTAKNTTL 422
           + ++    + + YY V ++  D     S   + +  G  A V + T + T L
Sbjct: 365 MPERPGE-RPESYYLVRVRTRDNRPTGSTAQVPILPGMVATVDVLTGQKTVL 415


>gi|126732082|ref|ZP_01747884.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Sagittula stellata E-37]
 gi|126707371|gb|EBA06435.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Sagittula stellata E-37]
          Length = 393

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 85/415 (20%), Positives = 173/415 (41%), Gaps = 56/415 (13%)

Query: 20  MTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           MT+ L  I +   I W+ +  ++  V + GEI++      I++   GI+ +  V+ G ++
Sbjct: 21  MTIWLCAITVWVFIVWASMAWLDEIVRAEGEIISSSRPQIIQNLEGGILSELLVKEGDEV 80

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
           L+G  L                      R H    +S++D L ++   LE      E +L
Sbjct: 81  LRGDVLA---------------------RLHGTQFRSSVDDLRDQITALEIRRLRLEAEL 119

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
               G       +V    + ++  S +  L   +S Y++R     K      +L    ++
Sbjct: 120 S---GNSVVEVPEVLRERLPAMVASEQALLAARQSDYISRRQGAQK------VLDQAAEE 170

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE-FAN 257
             +M+NL +K  V+  ++ +            R+   + KN    I    + A  E F+ 
Sbjct: 171 KALMENLLDKKVVALIEVTRA-----------RKAYADAKNAYDEIVTRTELARAEEFSE 219

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            LKE++  L+QN +   D++++ T+L         +SP+ G +      +     +  + 
Sbjct: 220 TLKELA-TLKQNLKASLDQLNR-TVL---------VSPLHGVVNKLSVTTIGGVVRPGEE 268

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +M+I+P  +  ++ AKV P+ I  ++ G   T++   Y        K  ++ I     + 
Sbjct: 269 IMQIIPLDEELFVEAKVKPEDIAGIRPGQEVTIKLSAYDYTIYGALKGRVDVISADTFKD 328

Query: 378 DNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           +   +   +Y+V  ++   A +D    +E+R G  A+V       T+ Q ++ P+
Sbjct: 329 ERRPELPPHYKVTARVDRDAMTDRQAAMEVRPGMQAQVELHTGEKTVLQYLLKPL 383


>gi|332710152|ref|ZP_08430105.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
 gi|332351110|gb|EGJ30697.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
          Length = 540

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 84/391 (21%), Positives = 160/391 (40%), Gaps = 74/391 (18%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W+    I+ +V + G++  +  V E+++P  G++ K  ++ G ++ +G  LL+FE   
Sbjct: 81  MVWAYFAKIDYAVPARGKLEPQGAVKEVQAPVGGVVTKIHIKEGQRVKEGDLLLSFEPKA 140

Query: 92  T-TDLIDLKKVSIKNLR------------CHIDTEKSALDF-LNNKYDVLEKAFESREEQ 137
           T   L  L K     +R             +       +D  L+++   L     SR   
Sbjct: 141 TQAQLTSLNKRRATLIRENQFYQAAISNPNYPPVPPPGMDIQLSSQ---LPSLIASRNT- 196

Query: 138 LLDFLGKYHSTCSKV-------------FNYGISSVYRSLKMKLTRMRSI----YLNRLD 180
           LL  +G Y +  S                 YG +++   +    +R+ S+      N++ 
Sbjct: 197 LLSEIGLYRAQLSGGSSRANLNPEQRIRLQYGTAALDARIAELESRIGSLEEQLKQNQIQ 256

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L N     R +L+  +  LT ++ L+E+   S+    +Q+  V     E+   I E+K +
Sbjct: 257 LANG----RDILTVEEGILTDLRPLYEQGGFSKIQFLRQQNEVKNRQTEVNARIEEEKRL 312

Query: 241 LRHI-------------------------NELYDEANLEFANYLKEISRDLEQNQRTFAD 275
            + I                          E  D  N + A+ + ++++ +  N +  A+
Sbjct: 313 QKEIAGVRANLLSTIASSQRELADLMAQNKERIDSINTQIASIISQLNQRIVDNNKQMAE 372

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV- 334
             S+L   + T   + + +P+ GT+   Q  +    A  +QP++KIVP S L    AKV 
Sbjct: 373 IDSQLQQAQLTLSYQELRAPVDGTVFDLQPSTPGFVANTTQPVLKIVPGSSLI---AKVY 429

Query: 335 -TPKQIQHVKKGYTATVR-----FPHYADIR 359
            T + I  V +G    VR     F  + D++
Sbjct: 430 LTNRDIGFVDEGMETEVRVDSFPFSEFGDVK 460


>gi|126736716|ref|ZP_01752455.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. CCS2]
 gi|126713831|gb|EBA10703.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. CCS2]
          Length = 434

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 88/445 (19%), Positives = 188/445 (42%), Gaps = 51/445 (11%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           ++  +TLL ++G  G  TW+++  I  ++ ++G+I  + N   ++ P  G++++  V+ G
Sbjct: 16  TIGALTLLILVG--GFGTWAVMAQISGALITTGQIEVDRNRQVVQHPDGGVVEEIIVDEG 73

Query: 76  SQILQGTPLLTFEDI---ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             +  G  LL  +         +++ +   I   R  ++ E+     L    DVL +   
Sbjct: 74  DTVAAGDLLLRLDPTVLQSELAIVEGQLFEILARRARLEAERDDAPVLAFS-DVLHEVGT 132

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              ++L+D  G+      ++F   + +   S++ +LT+ R+   ++L          A +
Sbjct: 133 PEVQRLMD--GQ-----DRLFQARLETNRGSVE-QLTQQRAQIASQL----------AGI 174

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           ++ Q+ L+  + L  +    Q  L  +        L L+    E+ N+L  + +L  ++ 
Sbjct: 175 AAQQQALSTQQELIAQELSDQQSLLDRGLAQASRVLALQ---REEANLLGTVGDLTAQSA 231

Query: 253 -------------LEFANYLKEIS----RDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
                        L  A   +E +    RDL+ N+   ++   +   L +  E+  I +P
Sbjct: 232 QAGERMTEIELQILGLAASRREDAITQLRDLQFNELELSE---RRRTLRRQLERLDIRAP 288

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           ++G +   Q F+  +  + + P++ ++P  +   I  +V    I  V  G   T+RF  +
Sbjct: 289 VSGVVYGLQVFAPQSVIRPADPVLFLIPQDRPLVIATQVQVVDIDQVFVGQEVTLRFSAF 348

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYY--EVILKITDLAFSDNNIELRNGFPAEV 413
              R  + +  +  +     Q  N      YY  EV L+   +A   +++ L  G P E 
Sbjct: 349 DQKRSPELQGTVTLVSADAFQ--NETSGLSYYRAEVQLEEGQMARLPDDMTLIPGMPVEA 406

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIF 438
                + +    +I P+ D + K F
Sbjct: 407 FVRTADRSPLNFLIKPLADYFNKAF 431


>gi|15604182|ref|NP_220697.1| alkaline protease secretion protein AprE [Rickettsia prowazekii
           str. Madrid E]
 gi|3860874|emb|CAA14774.1| ALKALINE PROTEASE SECRETION PROTEIN APRE (aprE) [Rickettsia
           prowazekii]
 gi|292571915|gb|ADE29830.1| HlyD family secretion protein [Rickettsia prowazekii Rp22]
          Length = 511

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 107/464 (23%), Positives = 181/464 (39%), Gaps = 64/464 (13%)

Query: 11  RNHPASLKRMTLLSIIGIIGLIT-----WSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           RN+ A   R  +L  I +I  +      WS L P++    + G ++   N   I+    G
Sbjct: 73  RNNVAQAARSPILFGIYVIIFLVLIGGLWSALAPLDSGAVAIGIVIPSTNKKTIQHNEGG 132

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL-------- 117
           II    V+ G ++ +G  L+   ++E T +    +  +   R  + TE   +        
Sbjct: 133 IINAIYVKQGDKVKEGDKLI---ELEETRIKSEHENILSQYRNFLATENRLIAERDNLEQ 189

Query: 118 ----DFLNNKYDVLEKA-FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL------KM 166
               DFL    ++ E A     +E L     + + +    FN  I+ + + +      K+
Sbjct: 190 IKFSDFLMQNINLPEVAKIIHTQENLFKSRKEVYFSEKDAFNQNIAQLEKKIDGLEAKKI 249

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQERIV 223
             ++   +Y +RL         +AL +  +K       L E   K A +++D+   E  +
Sbjct: 250 AASKTSEVYQDRL---------KALRTLKEKGFIQKAALLEQEAKVAAAKSDVATTEAEI 300

Query: 224 YKSTLELRENIHE-QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                 +R  I E Q  ++ H N+ Y E  L           +L + Q   A    K   
Sbjct: 301 AG----IRHAITETQIKIINHQNK-YTERTLT----------ELREAQIQTASLKEKYNS 345

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           L     +  I SP+ G IV N  + +        QP+M+I P +    I A+++ K I  
Sbjct: 346 LTDLLNRVIIRSPVDG-IVNNLKYHTIGGVISHGQPIMEISPINDPLIIEARISQKNIDS 404

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN---NLQTQEYYEVILKITDLAF 398
           V +G  A +RF  +       F   +  I P I Q +      Q   YY   ++I    F
Sbjct: 405 VHEGLVAKIRFSAFKSRTTPTFTGKVVSISPDIVQDERQHLGQQQDNYYVARIEINMEEF 464

Query: 399 SD----NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           +      N+ L  G  AEV       TL + ++ P+TD   K F
Sbjct: 465 NKVAKVKNLALHPGMQAEVQIVTGTRTLLRYLLDPVTDTAFKAF 508


>gi|241207007|ref|YP_002978103.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240860897|gb|ACS58564.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 449

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 95/441 (21%), Positives = 184/441 (41%), Gaps = 48/441 (10%)

Query: 24  SIIGIIGLIT-------WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           SI+G+  L T       W+   P+  +V + G  +   N   ++    GIIK+ +V  G 
Sbjct: 28  SIVGLTVLFTSFGGFGFWAATAPLASAVIAQGSFVATGNNKIVQHLEGGIIKEMRVSEGD 87

Query: 77  QILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            + +G  LLT +   +     ++ L+++ ++ +   +  E   L                
Sbjct: 88  TVKEGDILLTLDPTASRSNERMLQLRRLRLEAIVARLRAEAQGL---------------- 131

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISS---VYRSLKMKLT-RMRSIYLNRLDLENKSSLLR 189
           RE QL + + K  S      N  I S   V+ S ++KL  ++  I  N   LE + +  R
Sbjct: 132 RELQLPNIVTKEASDTD--INAIIQSQNVVFHSKQIKLEEQLNLIGKNIASLEFRFAGYR 189

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               S ++ L+++    E++  S+  L +   +     L +   I +    +  +N   +
Sbjct: 190 GQRDSFERQLSLLTE--ERD--SKARLVKVGYMRRTDLLAIERAIADAMGDIARLNGELN 245

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEM-SKLTILEKTREQ----------KTILSPIAG 298
           E+  E A + +E    +  N++   D + +  T L+  REQ           TI SP++G
Sbjct: 246 ESEAEIAKFRQEAVIAVNSNKQAALDALETAETDLDSVREQMREAAGVLERTTIRSPVSG 305

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T+V +   ++       +P+M+I+P      + A+V    I  + +G TA++R       
Sbjct: 306 TVVRSYFHTAGGVITTGKPIMEILPSHVPLILEAQVLRTSIDQLHEGETASIRLTALNRR 365

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
                +  +  +     ++++    ++ Y V + I D   +  +N     G PAEVL   
Sbjct: 366 TTPVLQGKVFYVSADSIEENSGASVKDVYIVRVGIPDSEIARVHNFHPVPGMPAEVLIQT 425

Query: 418 KNTTLAQEIIHPITDNWPKIF 438
              T  + +  PITD+  + F
Sbjct: 426 SERTFFEYLSKPITDSMSRAF 446


>gi|148652570|ref|YP_001279663.1| HlyD family type I secretion membrane fusion protein [Psychrobacter
           sp. PRwf-1]
 gi|148571654|gb|ABQ93713.1| type I secretion membrane fusion protein, HlyD family
           [Psychrobacter sp. PRwf-1]
          Length = 389

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 83/411 (20%), Positives = 161/411 (39%), Gaps = 55/411 (13%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +++IGI  L+ W+    I+    +   ++      E+++   G++ +  V  G  + +G 
Sbjct: 22  IALIGITVLLVWAYFAKIDQVTRAKATVIASARTQEVQASDGGVLTQILVSEGDDVKKGQ 81

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L+  E+                     +  ++A D   +K   LE        ++ D  
Sbjct: 82  LLVVLEE---------------------ERAQAAFDSSASKSAALEAQLARLNAEIFDRP 120

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            ++     K   Y    V    ++   R ++I         + S L  +L   QK+L M 
Sbjct: 121 LRFPDNVRKYPEY----VENQTQLYNRRRQAI-------NEEVSSLEDMLVLAQKELDMN 169

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + L     VSQ D+ +  R V         +I  Q N  R  N+ +++A  E     +++
Sbjct: 170 EPLLAYGDVSQADVIKLRRQV--------ADIKAQINNKR--NKYFEDAQAEMTKAQEDL 219

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
             +LEQ           L    +  ++K +LSP  G +      +     +  + +M+++
Sbjct: 220 DAELEQ-----------LRDRSQVLQEKRLLSPQDGKVNNINITTIGGVVKPGEVIMELL 268

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P S    + AKV+P  I +V++G  A+V+   Y        +  +  I P    +     
Sbjct: 269 PTSSDLIVEAKVSPADIAYVQEGQVASVKLDAYDFSIFGAMRGTVTYISPDTLLEKTPKG 328

Query: 383 TQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            + YY V++KI    F+   + I ++ G  A V   A   ++   +  PIT
Sbjct: 329 DEPYYRVLIKIGKAEFAGRGDEIVIKPGMTASVDIKAMERSVLSYLTKPIT 379


>gi|238760136|ref|ZP_04621284.1| HlyD family secretion protein [Yersinia aldovae ATCC 35236]
 gi|238701634|gb|EEP94203.1| HlyD family secretion protein [Yersinia aldovae ATCC 35236]
          Length = 410

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 84/424 (19%), Positives = 171/424 (40%), Gaps = 37/424 (8%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           + + G +G + W+ L P++  ++  G+++  +N   I+S   G I++  V  G +++ G 
Sbjct: 1   MVLAGFVGFLLWAGLAPLDKGIAVMGKVVVAENRKVIQSLQGGRIQQLHVVEGDEVIAGQ 60

Query: 83  PLLTFEDIETTDLID------LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            L+T +D    +  D      L  ++ +        E + + F     D  E +   R  
Sbjct: 61  LLITLDDTVIRNQRDNLQHQYLSALAQETRLAAEQNELAEISFPQILLDHPEHSLVERNI 120

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR----MRSIYLNRLDLENKSSLLRALL 192
            L   L ++           +S + R L  ++TR    ++ + + R + + +S L     
Sbjct: 121 VLQRQLFQHRRQAQ------LSEIAR-LSAQITRYQDRLKGLQVMRSNNQRQSDLF---- 169

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              Q+ L  ++ L +   V++N L   ER      + L   I +  + +   ++L DE  
Sbjct: 170 ---QRQLQGIQLLAKNGHVAKNQLLDMER----QAISLHAQIDQDTSDIAETHKLIDETE 222

Query: 253 LEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
              +     Y  E    L + Q++  +   +L+I E   E   + +P++G ++     + 
Sbjct: 223 QHISQRHEQYQSENREQLAKAQQSTQEFAQRLSITEYELENTRLYAPVSGVVIALAQHTI 282

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  Q LM++VP  +   I A++  + I  V  G    + F  +      K +  + 
Sbjct: 283 GGVVSTGQTLMELVPSGQPLLIEAQLPVELIDKVAVGLPVDLNFSAFNQSNTPKLQGSVL 342

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +     Q    LQ   YY + + I D+A     + +R G   +V       +L   +  
Sbjct: 343 HVGADRIQHPQTLQP--YYPLTVAI-DIA--QTALAIRPGMSVDVFIRTGERSLLNYLFK 397

Query: 429 PITD 432
           P+TD
Sbjct: 398 PLTD 401


>gi|42520498|ref|NP_966413.1| HlyD family secretion protein [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410237|gb|AAS14347.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 506

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 100/452 (22%), Positives = 178/452 (39%), Gaps = 47/452 (10%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + +L   GI G+  WS + PI+ +V +SGE++   N   ++    GII K  V+
Sbjct: 72  PLFFGLVVILIFFGIGGI--WSAIAPIDGAVHASGEVIVSSNRKIVQHLGGGIISKILVK 129

Query: 74  NGSQILQGTPLLTFEDI-ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
               + +  PL+   D+ E  +L  +K    + L   + TE   L  +    D LE   E
Sbjct: 130 ESQAVKKDEPLVLLSDVNEKANLSIIK----EKLLSFLATEARLL-AIRVDLDTLEFPDE 184

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            ++    + + K      K+FN    S+    K  + + R   LN    +  + L   L 
Sbjct: 185 VKKLSHDELVNKAIKNQVKLFNSQRKSILG--KTDILQQRIKQLN----DELAGLNFQLN 238

Query: 193 SSHQK------DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           ++H++      +L   + L +   +S+  +   E    K   E+   +   ++ +  + +
Sbjct: 239 AAHKQYDLITEELETKRQLLDSGHISKPHILALE----KQFAEIEGRVGHYRSAISQVQQ 294

Query: 247 LYDEANLEFANYLKE----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              E  LE  N   +     + +L++   + AD   +L + E +  +  I SP  G +  
Sbjct: 295 KIGENELEIINVRNDSQERANAELKEVSTSIADLKERLMVAEDSLARTIIKSPQDGIVTD 354

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV----KK-----------GYT 347
            +  +     Q   P+M +VP      I AK+  + I+ V    KK           G  
Sbjct: 355 IRYHTEGGVIQSGVPIMSVVPSDDDLIIDAKIQTRNIEEVLSAQKKDSNIVSIDGLEGLK 414

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELR 406
             VR   Y+  R      I+  I P      ++ +   YY V + I     +   N+ L 
Sbjct: 415 VKVRLSAYSARRLSLISGIVSHISP---DALDDPRLGRYYSVRVVIPKPELAQFKNVYLY 471

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            G PAEV    ++ TL   +  PI     + F
Sbjct: 472 PGMPAEVYIVTQSRTLLSFLFTPIIATVDRSF 503


>gi|157369840|ref|YP_001477829.1| HlyD family type I secretion membrane fusion protein [Serratia
           proteamaculans 568]
 gi|157321604|gb|ABV40701.1| type I secretion membrane fusion protein, HlyD family [Serratia
           proteamaculans 568]
          Length = 443

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 86/426 (20%), Positives = 173/426 (40%), Gaps = 28/426 (6%)

Query: 19  RMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           RM  L + IG+ G   W+   P++  V+S G +    N   +++P SGIIK   V+ G +
Sbjct: 25  RMGWLVVGIGLFGFFAWAAFAPLDKGVASPGSVTVSGNRKTVQAPASGIIKSITVKEGDK 84

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-----FE 132
           +  G  L+    ++    +D       +LR    T  ++   L  + D L K      FE
Sbjct: 85  VKAGEVLVQLSQVQAQAQVD-------SLRDQYYTTLASEGRLLAERDGLSKVTFSPVFE 137

Query: 133 SREEQLLDFLGKYHSTCSKVFN---YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           + + Q    + +  +  +++F+    G+ S     K  +  MR        L++     +
Sbjct: 138 TIQAQ--PRVAEIIALQTQLFSSRRIGLQSEVDGYKQSMDGMR---FQLKGLQDSRVNKQ 192

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             LSS ++ +  MK L     + +N   + +R   +    + E +     + + + E   
Sbjct: 193 IQLSSLREQMNSMKQLAADGYLPRNRYLEVQRQFAEVNSSIDETVGRIGQVQKQLQESQQ 252

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
             +  FA+Y +E+   L Q Q   ++  +KL +         I SP+ GT+V    F+  
Sbjct: 253 RIDQRFADYQREVRTQLAQTQMDASEFRNKLEMANFDLGNTAISSPVDGTVVGLNIFTQG 312

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                   LM +VP      + +++  + I  V  G    + F  +   +  K    +  
Sbjct: 313 GVVGAGDHLMDVVPSQATLVVDSRLKVELIDKVYNGLPVDLMFTAFNQNKTPKIPGTVTL 372

Query: 370 I--DPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  D ++ + +     + YY++ + ++       +  +++ G P EV     + +L   +
Sbjct: 373 VSADRLVDKANG----EPYYQMQVTVSPEGMKLLSGEDIKPGMPVEVFVKTGSRSLLSYL 428

Query: 427 IHPITD 432
             PI D
Sbjct: 429 FKPILD 434


>gi|227823530|ref|YP_002827503.1| putative secretion protein Type I [Sinorhizobium fredii NGR234]
 gi|227342532|gb|ACP26750.1| putative secretion protein Type I [Sinorhizobium fredii NGR234]
          Length = 445

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 98/462 (21%), Positives = 180/462 (38%), Gaps = 73/462 (15%)

Query: 14  PASLKRMTLLSI----IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           P S+ + T+  +    +   G   WS   P+  +V + G  +       I+    GIIK 
Sbjct: 17  PRSIWKQTIAGVALMAVTFGGFGVWSFTAPLAAAVIAQGSFVATGQNKIIQHLEGGIIKD 76

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V  G  I+   PL+  +  ET  L + +++ ++  R      +            L  
Sbjct: 77  ILVSEGDHIVADQPLMRLD--ETAALANQRQLFLRRARLEAIVAR------------LMA 122

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSV--YRSLKMKLTRMRSIYLN-----RLDLE 182
             E  ++  L  +   H    +V     S    +R+ K KL     +Y       R  +E
Sbjct: 123 QIEGTDKIELPAILAPHMQDPEVEPIIRSQELNFRAWKSKLDSEIGLYKQNIEGFRFRVE 182

Query: 183 NKSSLLRALLSSH---QKDLTMMKNLFEKNAVSQNDLNQQERIVYKS-------TLELRE 232
                  A+   H   Q++    K+L +K+ + + ++   +R +  +       T E+ E
Sbjct: 183 GYQQQRDAVRQQHALLQEEYVGKKSLLDKDLIRKTEIKSIQRAIADAEGQVGRLTAEISE 242

Query: 233 N---IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               + +Q+  +R   E Y EA LE    L+++  +L+  +       S L        +
Sbjct: 243 TGAQVLKQEQQIRQTEETYREAALE---ELQKVEAELDSVREQLIGAASVL-------RR 292

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            TI +P++GT+V     ++    +  +P+M+I+P      I A+V   QI  VK G  AT
Sbjct: 293 ATINAPVSGTVVRLYYHTAGGVVETGKPIMEILPSDVPLIIEAQVIRTQIDSVKIGQKAT 352

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ-----------TQEYY--EVILKITDL 396
           VR             A+ ++  P+++ +   +            TQE Y   V L ++++
Sbjct: 353 VR-----------LTALNQRTTPVLNGEVYYVSADSVPDPATNGTQEVYLARVSLPVSEV 401

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                 +    G PAE+L      T    +  PI D+  + F
Sbjct: 402 TRISGFVPT-PGMPAEILIQTAERTFFDYLTKPIRDSMARAF 442


>gi|332140532|ref|YP_004426270.1| HlyD family secretion protein [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550554|gb|AEA97272.1| HlyD family secretion protein [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 455

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 180/422 (42%), Gaps = 39/422 (9%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P   K +  L  I +  L+ WS    I+      G++++   +  ++S   GI++   V 
Sbjct: 42  PVKAKGLLYLVSIVLFLLVVWSYFAEIDEVAKGDGKVISSQQLQVLQSYDGGIVQDILVA 101

Query: 74  NGSQILQGTPLLTFEDIETTDLID-----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
            G  +  G  LL  +       ++        ++ K  R    T+  AL F N +     
Sbjct: 102 EGQTVKAGQVLLRVDPTRFLSSLEENTTQFAALAAKVQRLSALTQGKALRF-NKELQEQA 160

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            +    E +L      Y+S  +++      S  R ++    R + +   R +L    S  
Sbjct: 161 PSIIENERKL------YNSNLAELDEVAAGSDSRIMQ----RRQDVEEERANL----SQY 206

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML-RHINEL 247
           + +LS  +K+L++ K L    AVS+ ++ + ER V    +EL  NI + K  + R +N +
Sbjct: 207 QNVLSLTRKELSVTKPLLASGAVSEIEILRLERQV----VELEGNITKSKVAIERGLNAI 262

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKL----TILEKTREQKTILSPIAGTIVYN 303
            +E   +  + L+ ++R   Q       EM+ L    T LE    Q  I SPI GT+   
Sbjct: 263 EEEIIKKEESRLRLVNR-WNQELTDATGEMATLQQSQTSLEDVVSQADIRSPINGTVQRL 321

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +          ++++VP      + AKV+PK I  +++G  A ++F  Y        
Sbjct: 322 LINTVGGVITPGSAVVELVPQDDQLIVEAKVSPKDIAFIRQGQPAILKFSAYDFTIYGGM 381

Query: 364 KAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNT 420
            A ++ I  D I + +D     + YY V L+ T  + +D ++++  G   +V + T K T
Sbjct: 382 SAEVQHISADAITNDKD-----ETYYLVRLE-TKRSIADESLDILPGMIVQVDILTGKKT 435

Query: 421 TL 422
            L
Sbjct: 436 VL 437


>gi|316933441|ref|YP_004108423.1| HlyD family type I secretion membrane fusion protein
           [Rhodopseudomonas palustris DX-1]
 gi|315601155|gb|ADU43690.1| type I secretion membrane fusion protein, HlyD family
           [Rhodopseudomonas palustris DX-1]
          Length = 455

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 97/447 (21%), Positives = 188/447 (42%), Gaps = 46/447 (10%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R H A +  + L  +IG +G   W++   +  +V +SG ++ E +V +++ P  G+I + 
Sbjct: 33  RKH-AIIGWLALALLIGGVG--GWAVTAELAGAVVASGLLVVESDVKKVQHPTGGVIGEL 89

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V +GS++  G  L+  +  ET    +L  V +K+L   ++  K+ L+   +  D +   
Sbjct: 90  LVRDGSRVEGGDVLVRLD--ETVTRSNLAIV-VKSLN-ELNVRKARLEAERDDADRV--V 143

Query: 131 FESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-----LEN 183
           F S    L +   +G   +  +++F      + RS +          + +LD     L  
Sbjct: 144 FPSHLTALTEDPEIGDLMTGEARLFE-----LRRSARQGQKAQLQERIGQLDEEIAGLTG 198

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH--EQKNML 241
           +S+  R  ++   ++L  ++ L+EK  V  N      R++   TLE RE++    + N L
Sbjct: 199 QSNSKRREITFIHQELVGVRELWEKRLVPIN------RVM---TLE-RESVRLDGESNQL 248

Query: 242 RHINELYDEANLEFANYLKEISRDLEQN--------QRTFADEMSKLTILEKTREQKTIL 293
                      +E    + +I +DL  +        Q   A+ + +    E   ++  I 
Sbjct: 249 IAAAAQAKGKKIETGLQIIQIDQDLRSDVAKELREIQGKTAELVERKVAAEDQLKRIDIR 308

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P +GTI      +       S+ LM IVP      +  K++P  I  V  G  A +RF 
Sbjct: 309 APQSGTIHQLSVHTVGGVVGASETLMLIVPDEDALNVEVKLSPSDIDQVHVGQPAVLRFS 368

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY--EVILKITDLAFSDNNIELRNGFPA 411
            ++     +   ++ ++   I+Q      +  YY   V +   ++A     + L  G P 
Sbjct: 369 AFSQRTTPEINGVVSRVSADITQDQKT--SAAYYIARVTMPKNEIARL-GQVRLMPGMPV 425

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIF 438
           E        T+A  ++ P+ D   + F
Sbjct: 426 EAFIQTDTRTVASYLVKPLHDQIMRAF 452


>gi|282901168|ref|ZP_06309098.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
 gi|281193942|gb|EFA68909.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
          Length = 521

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 168/400 (42%), Gaps = 72/400 (18%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M  L ++   G + W+    IE  V ++G++  E  V ++++P SG++K   V++G ++ 
Sbjct: 59  MITLMLVACFG-VGWAYYAKIEQVVPATGQLKPEGTVKDVQAPISGVVKSVHVKDGQEVK 117

Query: 80  QGTPLLTFEDIET-TDLIDLKKV------------SIKNLRCHIDTEKSALDFLNNKYDV 126
            G  LLTFE + T  +L  L KV             + N    I +E   L+FL      
Sbjct: 118 PGDLLLTFESVATLAELGALNKVRAALIKENDIYRRLMNASGAISSE---LNFLGGSLPA 174

Query: 127 LEKAF--ESR-----EEQLL-DFLGKYHSTCSK---------VFNYGISSVYRSLKMKLT 169
            E AF  +SR     E QLL   LG                 V    + S   + K ++ 
Sbjct: 175 -ESAFLLKSRISLVEENQLLRSQLGNSRPETGVGIDEQKRLIVAKKELESRSNAAKFEVE 233

Query: 170 RMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           ++R       + R D +N        LS  Q  L  ++ L ++  +SQ     Q++ V  
Sbjct: 234 KIRKQLSQTIVKRKDTQNS-------LSIQQGILDRVEVLAKEGGISQLQYLNQQQQVQN 286

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFA----NYLKEIS--------------RDLE 267
              E+ +   E+K +   I     E     A    N L+EI+              R + 
Sbjct: 287 LKAEIAQLEEEEKRLGFDIQRAEQEVTNTIAVTDKNVLEEIATNKKRIAEIDSQFMRIIL 346

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
            N++  AD  SK++  +   + + + +P++G I   Q+ +    A  +Q L++IVP+ K 
Sbjct: 347 DNEQKLADISSKISQTKLNVKYQELRAPVSGIIFDMQAKNPGFVANPTQKLLQIVPNDK- 405

Query: 328 TYI-RAKVTPKQIQHVKKGYTATVR-----FPHYADIREK 361
            YI    +T K I  VK+G    VR     F  + DI+ K
Sbjct: 406 -YIAEVFITNKDIGFVKEGMKVDVRIDSFPFSEFGDIKGK 444


>gi|238754711|ref|ZP_04616063.1| HlyD family secretion protein [Yersinia ruckeri ATCC 29473]
 gi|238707019|gb|EEP99384.1| HlyD family secretion protein [Yersinia ruckeri ATCC 29473]
          Length = 438

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 80/417 (19%), Positives = 169/417 (40%), Gaps = 17/417 (4%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL + G IG   W+   P++  V+  G ++  +N   ++S   G I +     G  + +G
Sbjct: 24  LLVLTGFIGFFAWASFAPLDKGVAVPGIVIVAENRKIVQSLQGGRITQLHTTEGEWVEKG 83

Query: 82  TPLLTFEDI---ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             L++ +D       D +  +  S+ +L   +  E+S    +     +L++  +   E+L
Sbjct: 84  QLLISLDDTAIRSQRDNLQQQYFSLLSLEARLIAEQSNSALITFPEALLKQRGQPIIEEL 143

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +    +      +V    ++ +   +     R+  +++ R++ + +S L+       Q+ 
Sbjct: 144 MALQQQLLHHRHQVQKGELTRLSTEIARLHERLAGLHIQRVNNQRQSDLI-------QQQ 196

Query: 199 LTMMKNLFEKN--AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           L  ++ L +    A SQ    + + I++ + ++ ++N +  +   RHI E       +  
Sbjct: 197 LKGIRALAQNGYVATSQQLEMESKAIMFLAKVD-QDNSYIAETH-RHIQETEQRLAQQHE 254

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            Y  +I   L + Q+   +    +T+ E       I +P +G I+     +        Q
Sbjct: 255 QYQADIHEQLAKAQQNRRELGQHITVAEYELANMQISAPASGVIIALAQHTVGGVVGSGQ 314

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            LM+IVP+ +   I A++  + I  V  G    + F  +      +    + ++     +
Sbjct: 315 QLMEIVPNGEPLLIEAQLPVELIDKVAVGLPVDLIFSAFNQSHSPRLAGTVLRVGA--DR 372

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            DN    Q YY + + I   A     IE +R G   +V       +L   +  P TD
Sbjct: 373 LDNRHSLQPYYPLTVSINIDAVQQTQIEKIRPGMSVDVFVRTGERSLLSYLFKPFTD 429


>gi|170741552|ref|YP_001770207.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium sp. 4-46]
 gi|168195826|gb|ACA17773.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium sp. 4-46]
          Length = 435

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 86/449 (19%), Positives = 179/449 (39%), Gaps = 33/449 (7%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H    ++L+R          LL++    GL  W+    +  +V + G ++ E NV +++ 
Sbjct: 5   HPRTRRSLRRAMVGGSAVTALLAL----GLGGWATTTELAGAVIAPGALVVETNVKKVQH 60

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS-----IKNLRCHIDTEKSA 116
           P  G++ + +V +G+++  G  L+  +  ET    +L  V+     +   +  +  E+  
Sbjct: 61  PTGGVVGELRVRDGAEVRAGEVLVRLD--ETVTRANLAVVTKSQDELTARQARLKAEQDG 118

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHS--TCSKVFNYGISSVYRSLKMKLTRMRSI 174
            D ++   ++L++  E     + D LG+        +    G  +    L+ ++ ++R  
Sbjct: 119 RDQVHFSAELLQRGAEP---AIADLLGEEERLFAIRRTAREGQKA---QLRERIGQLREQ 172

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LR 231
                D         +L+    ++L  ++ LF KN +    +   ER   +   E   L 
Sbjct: 173 IQGMTDQVTAKQREISLIG---EELRGVRELFAKNLIQITRVTALERDAARLEGERGALV 229

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQRTFADEMSKLTILEKTREQK 290
            +I + K  +    EL     L+    L+ E+ ++L + +   A+ + K    E    + 
Sbjct: 230 SSIAQTKGKVTE-TELQ---VLQVDQDLRTEVGKELAEIRGKLAELVEKRVAAEDQLRRV 285

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +P  G +      +       S+PLM IVP S    + AK+ P+ I  V+ G+ A +
Sbjct: 286 EIRAPQDGVVHQLAVHTVGGVVSPSEPLMLIVPRSDALTVEAKIQPQDIDQVRLGHRAVL 345

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGF 409
           RF  +      +    +  +   ISQ      +  +Y V ++           ++L  G 
Sbjct: 346 RFSAFNQRTTPELSGEVSVVSADISQDQKTGAS--FYTVRIRPAAGELDRLQGLKLVAGM 403

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           P E         +   +  P+ D+  + +
Sbjct: 404 PVESFIQTGERAVMSYLTKPLQDHLARAW 432


>gi|91775699|ref|YP_545455.1| Type I secretion membrane fusion protein, HlyD [Methylobacillus
           flagellatus KT]
 gi|91709686|gb|ABE49614.1| Type I secretion membrane fusion protein, HlyD [Methylobacillus
           flagellatus KT]
          Length = 462

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 95/449 (21%), Positives = 172/449 (38%), Gaps = 85/449 (18%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           ++G  G + W+ L P++  V + G +  E     ++    GII +  V  G  +  G  L
Sbjct: 47  LLGFGGFLAWAALAPLDEGVPTEGLVTVEGRHKTVQHLNGGIISQLMVHEGQAVQAGDVL 106

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            T +   +                     K+  D +  +Y  L  A ESR       L +
Sbjct: 107 FTLDATAS---------------------KARFDEVRQRYLGL-LAQESR------LLAE 138

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                S VF+  +          + +    Y+ +L L N+S LLRA   + + D+  M+ 
Sbjct: 139 KLGAGSIVFHEEL----------IKQQGDPYVQQLML-NQSQLLRARQEALRADVEAMRE 187

Query: 205 LFEKNAVSQNDLNQQERIV---YKSTLEL--------RENIHE------QKNMLRH-INE 246
             +     Q  L +  + V   Y+S LEL        R+ + E      Q+N L   + +
Sbjct: 188 SIQ----GQQALIEGYQGVAGSYQSQLELLTQQLAGIRQLVSEGFAPRNQQNELEQKLAQ 243

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFA----------DEMSKLTILEKTREQK------ 290
            Y       +N L+     LE  QR  A           EM+++ +  +   +K      
Sbjct: 244 TYGLIATNDSNILRSRKAILELQQRITAREQTEKKEIDTEMAQVKLAVQADAEKYKPLWD 303

Query: 291 -----TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                T+ +P++G +V  Q  +     Q  Q +M IVP  +   + A++ P  I  +  G
Sbjct: 304 ELQRITVTAPVSGQVVGLQVHTVGAVIQPGQKIMDIVPFDEPLILDARIPPHLIDKIHTG 363

Query: 346 YTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NN 402
             A VRF  +++  +   +  ++ +  D ++           YY   + IT+       +
Sbjct: 364 QDADVRFSSFSNTPQLLLEGQVKTVSSDLLVDPGTGGQAPSSYYLARINITEDGMKTLGD 423

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             L+ G P +V+      TL   ++HP+ 
Sbjct: 424 RRLQPGMPVQVVIRTGERTLLTYLMHPLV 452


>gi|254474779|ref|ZP_05088165.1| type I secretion membrane fusion protein, HlyD [Ruegeria sp. R11]
 gi|214029022|gb|EEB69857.1| type I secretion membrane fusion protein, HlyD [Ruegeria sp. R11]
          Length = 434

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 89/449 (19%), Positives = 180/449 (40%), Gaps = 51/449 (11%)

Query: 16  SLKRMTLLSIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           S +R  ++ +IG++ LI    TWS+   I  ++ +SG I  + N   ++    GI++  +
Sbjct: 8   SARRPLIVGVIGVLVLIGGFGTWSVATSIAGAIVASGRIEVDRNRQVVQHLDGGIVQDIR 67

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLN------- 121
           V+ G  +  G  LL  +  E    + + +  +  L   R  ++ E+   + +        
Sbjct: 68  VDEGDTVESGQILLQLDARELRSQLAITEGQLFELIARRARLEAERDRAETITFDPELET 127

Query: 122 ---NKYDVLE------KAFESREEQLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTR 170
              N  DV +      + F +R + +   + +     +++ N   GI +       + +R
Sbjct: 128 AARNSADVRDLMQGQTRLFLARRDSVAREIEQLEKRRAQISNQITGIQA------QQASR 181

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
              + L R  LEN+ SLL   L+     L++ +        S+ DL      +  S  + 
Sbjct: 182 RTQLELIREQLENQQSLLDRGLAQAGTVLSLQR--------SEADLQGSLGELIASEAQA 233

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              I E    +  +     E  +     L+    +L + +RT  D + +L I        
Sbjct: 234 EGRITEIDIEILKLGTRQREEAISRLRDLRYQELELAETRRTLLDRLERLDIT------- 286

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
              +P++G +   Q  +  +  + ++P++ IVP  +   I A+V P  +  +  G   T+
Sbjct: 287 ---APVSGVVYGLQVHTPRSVIRAAEPVLYIVPQDRPLVIAAQVAPTDVDQIFVGQPVTL 343

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           RFP        +    ++++     +  N   +    E+ L    +        L  G P
Sbjct: 344 RFPALDQRSTPELFGAVQQVSADAFEDPNTGISYYRTEIALDPGQIDRLPEGTALIPGMP 403

Query: 411 AE-VLFTAKNTTLAQEIIHPITDNWPKIF 438
            E  + TA  + LA  ++ P+TD + + F
Sbjct: 404 VEGYIRTADRSPLAY-LVKPLTDYFVRAF 431


>gi|73666788|ref|YP_302804.1| Type I secretion membrane fusion protein, HlyD [Ehrlichia canis
           str. Jake]
 gi|72393929|gb|AAZ68206.1| Type I secretion membrane fusion protein, HlyD [Ehrlichia canis
           str. Jake]
          Length = 505

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 91/448 (20%), Positives = 183/448 (40%), Gaps = 51/448 (11%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +L   G+ G+  W+ + P++ SV + GE+++      ++    G+I K  V+ G  + 
Sbjct: 77  IIILLFFGVFGI--WAAVAPLDGSVIAQGEVISSSEKQIVQHLEGGLIDKILVKEGELVQ 134

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRC------HIDTEKSALDFLNNKYDVLEKAFES 133
           +  P++   +      +D+ K  + +L         I  ++ ++DF N   ++ +   E 
Sbjct: 135 KNQPIIYLHNTTAQANLDIIKERMLDLLATEARLIAIKYDRESIDFPNTIKNLSD---EK 191

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             +Q++    +   +  K     IS     L+ +  ++R       +L   S+ L +  +
Sbjct: 192 TRDQIIQNQQQLFESHKK----NISGQIDILQQRTKQLRQ------ELSGLSAQLTSATT 241

Query: 194 SHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            H+   ++L   KNL E   +S+  +   ER       E    I + K+ +  +N+   E
Sbjct: 242 QHKLISEELETKKNLLETGYISKPYIIALER----QYAESEGKIGQLKSAIASVNQKIGE 297

Query: 251 ANLEFANYL----KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             LE  N       +I+ DL+       D   ++   +   ++ TI SP AG I   +  
Sbjct: 298 NKLEIINITNNVQNKINLDLKDITSAITDLKERMKTAQDILDRTTIRSPHAGVITGLKYH 357

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVR 351
           +         P+  +VP +    I AK+  + I+ +                +G  A VR
Sbjct: 358 TEGGVIPPGAPITNVVPLNDDLVIDAKIQTRHIEEILSAQMKDKNIVSYEKYRGLKAKVR 417

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFP 410
              Y   +      I+ ++      + N ++   YY++ + I  + +    N++L  G P
Sbjct: 418 LSAYNIRKIGLVNGIVVQVSADALSEINGMR---YYKIQVIIPKEQSEKLRNLKLYPGMP 474

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           AEV    ++ TL   +  PIT  + K F
Sbjct: 475 AEVFIITQSRTLLNYLFTPITSTFEKAF 502


>gi|116051424|ref|YP_789743.1| metalloprotease secretion protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115586645|gb|ABJ12660.1| metalloprotease secretion protein [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 443

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 76/421 (18%), Positives = 169/421 (40%), Gaps = 26/421 (6%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L ++G +G + W+ L P++  V  SG ++   +   ++ P  G+++  +V  G ++  G 
Sbjct: 31  LVLLGFVGFLLWAGLAPLDKGVGVSGTVMVAGSRKAVQHPTGGLVRHIRVHEGERVEAGQ 90

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            LL  +  +        +     L        ++L  L+ + D  EKA      +LL   
Sbjct: 91  VLLEMDATQA-------RAQADGLFAQYLAALASLARLSAERD--EKARIEFPAELLALD 141

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                T  +       S  R+L+++L  +  ++  ++  L+   + LR   S  Q+ + +
Sbjct: 142 DPRLPTLLEQQRQLHDSRRRALRLELDGLAETVAGSQAQLDGLQAALR---SKEQQRVAL 198

Query: 202 ------MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                 ++ L  +  V +N L   ER++ +   E+  ++    +  R I EL        
Sbjct: 199 EEQLRGLRQLASEGYVPRNRLLDSERLLAQVNGEIAGDLGSLGSTRRQILELRLRMAQRR 258

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             + +E+   L   Q    +  ++L           + +P+AG +V  + F+        
Sbjct: 259 EKFQEEVRASLADAQVRAEELRNRLASARFDLANSEVRAPVAGLVVGQEVFTEGGVIAPG 318

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPI 373
           Q LM+I+P  +   + A++  + +  V+ G    + F  +      + +  +  +  D +
Sbjct: 319 QQLMEILPERQPLLVDARLPVEMVDKVRVGLPVELMFSAFNQSTTPRVEGEVTLVSADRL 378

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           + ++        YY V +++ +        +E+R G P E    +   +L   +  P+ D
Sbjct: 379 LDERSEA----PYYRVRIRVGEEGVRRLAGLEIRPGMPVEAFVRSGERSLLNYLFKPLAD 434

Query: 433 N 433
            
Sbjct: 435 R 435


>gi|218516625|ref|ZP_03513465.1| putative protein secretion protein, HlyD family [Rhizobium etli
           8C-3]
          Length = 238

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 87/193 (45%), Gaps = 8/193 (4%)

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D A LE ++ L EI++ +   +        +L  ++    +  I +P  GTI+  +  +S
Sbjct: 48  DLAKLE-SDRLSEIAQGMRDTEGRIMQLRERLRAIDDQLSRTDIRAPEDGTIMNLRVHTS 106

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  +PL+ ++P S    +   V P+ I  V+ G  A V    Y   R    K  +E
Sbjct: 107 GGVIGAGEPLVDLLPRSDRLIVSVHVRPEDINLVRAGLEAQVHLLPYNQRRVPLLKGRVE 166

Query: 369 KI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
            +  D +I  Q      Q Y+   +++TD   +  +++EL  G PA+ L     +++A  
Sbjct: 167 YVSADRLIDTQTG----QPYFAATIRVTDERLAKMSDVELVAGMPAQTLIETGESSVAFY 222

Query: 426 IIHPITDNWPKIF 438
            + P+ D++ + F
Sbjct: 223 AVRPLLDSFNRAF 235


>gi|261339669|ref|ZP_05967527.1| membrane fusion protein [Enterobacter cancerogenus ATCC 35316]
 gi|288318495|gb|EFC57433.1| membrane fusion protein [Enterobacter cancerogenus ATCC 35316]
          Length = 437

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 90/429 (20%), Positives = 174/429 (40%), Gaps = 35/429 (8%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           + G+   + W+ L P++  V +SG ++ +     I++P  G++K   V+ G  + +G  L
Sbjct: 26  LAGLGTFLLWAALAPLDKGVVASGTVMVDGYRKAIQAPTGGVVKHIAVKEGQTVHKGDLL 85

Query: 85  LTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN----NKYDVLEKAFES-- 133
           +      T  L  L    ++ L     +  +  E + +  L      + D L++      
Sbjct: 86  VLLSQRST--LAQLSAARLQYLTALIAQSRLQAELAGVSELQLPPEAQQDTLKEVIHPII 143

Query: 134 -REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            ++ QL+    +   +  +     I+ + R  +  L R           E K+S L ALL
Sbjct: 144 VQQRQLMTARKEALESAQQNDAQAIAGLERQ-RDALVRTA---------ETKASGL-ALL 192

Query: 193 SSHQKDLT--MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
           +   KDL   M +  F +N     D+  Q   +     E R  I E  N    I +L   
Sbjct: 193 NRQLKDLKPLMAEGYFPRNRYL--DIQVQFASLAGDLGETRSRIVESGN---QIAQLQRS 247

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                A+  KEI   L+Q +   ++   +LT+ +    Q  +++P  G ++     S S 
Sbjct: 248 MQQRLADNRKEIETQLDQLRLQISESKKQLTLSDVDLSQTRVVAPQDGVVMNLALASESA 307

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                + L+++VP S    + +++    I  V KG   T+ F  +   +  K  A +  +
Sbjct: 308 VVSAGEQLLELVPQSSSLIVDSQLDVSLIDKVHKGMPVTLMFTAFNQQKTPKIPAQVSLV 367

Query: 371 DPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                +Q +    + YY++ + ++ D   +    +++ G P EV   A    L   ++ P
Sbjct: 368 S--ADRQTDPATQKPYYKIQITVSPDGMKTLEKEDVKPGMPVEVFIKAGERPLLSYLMKP 425

Query: 430 ITDNWPKIF 438
           I D   + F
Sbjct: 426 ILDRASQSF 434


>gi|149200828|ref|ZP_01877803.1| type I secretion membrane fusion protein, HlyD family [Roseovarius
           sp. TM1035]
 gi|149145161|gb|EDM33187.1| type I secretion membrane fusion protein, HlyD family [Roseovarius
           sp. TM1035]
          Length = 435

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 101/460 (21%), Positives = 188/460 (40%), Gaps = 88/460 (19%)

Query: 25  IIGIIGLI-------TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           IIG+IGL+       TW+    I  ++ + G I  + N   ++ P  G++   +++ G +
Sbjct: 16  IIGLIGLVLLVGGFGTWAAFTQISGAIIAPGRIEVDQNRQVVQHPDGGVVSAIEIKEGDK 75

Query: 78  ILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL------- 127
           +  G  L+  +  E      +I+ +   +   R  ++ E+   D L  K+D L       
Sbjct: 76  VSAGQVLVRLDPNELQSELSIIENQLAELMARRGRLEAERDGRDAL--KFDPLLIDLSAQ 133

Query: 128 -----------EKAFESREEQL---LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                      +  FE+R + +   +D L K     S     GI +   +L       R 
Sbjct: 134 NADAADLMTGQKTLFEARAQTVAAEIDQLDKRRGQISNQIE-GIEAQQVALA------RQ 186

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTM----------MKNLFEKNAVSQNDLNQQERIV 223
           + L  L+L ++ SLL   L+   + L +          M +L  + A ++  + + E  +
Sbjct: 187 LELIELELTDQQSLLDRGLAQATRVLGLQREQARLSGTMGDLAAQKAEAEGRITEIEISI 246

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            K   + RE           I  L D   L+F    +E+  +L + +R   ++M +L I 
Sbjct: 247 LKLGTDRREE---------AITTLRD---LQF----REL--ELREQRRALIEQMGRLDIP 288

Query: 284 EKTREQKTILSPIAGTIVYN-QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                     +P++G +VYN Q F+  +  + + P++ IVP  +   I A+V    +  +
Sbjct: 289 ----------APVSG-VVYNLQVFAQRSVIRPADPVLFIVPQDRPLVINARVDSIHVDKL 337

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY---EVILKITDLAFS 399
             G   T+RF   + + ++    +  ++  I +    +  T+  Y   E++L   + A  
Sbjct: 338 FVGQEVTLRF---SALDQRTTPELFGRVTQISADAFEDEATRASYYRAEIVLSEGEQARL 394

Query: 400 DNNIELRNGFPAEVLF-TAKNTTLAQEIIHPITDNWPKIF 438
                L  G P E    TA  T LA  ++ P TD   K F
Sbjct: 395 PEGTTLIPGMPVEAFIRTADRTPLAY-LVKPFTDYLAKAF 433


>gi|284006182|emb|CBA71422.1| RTX toxin ABC transporter protein [Arsenophonus nasoniae]
          Length = 449

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 75/356 (21%), Positives = 161/356 (45%), Gaps = 36/356 (10%)

Query: 14  PASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P+   R+T L++ +G++  + W+    +++  +S+G ++   +   I++     + +  V
Sbjct: 32  PSPFARLTALTLSMGVVITMGWAYWGQLDVQATSTGRLIVSGHSQVIQAYEQSRLTELHV 91

Query: 73  ENGSQILQGTPLLTFEDIETT-DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           +NG  + +G PLLT + +  + D+I +       +  H   +      L NK    +  F
Sbjct: 92  KNGQHVKKGEPLLTLDALGVSQDIIGISH----QIEYHTIEKLLYQSLLENKIPHQQLTF 147

Query: 132 ESREEQLLDFLGK-YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               ++  + + K YH   ++ F+  I+S+   +++  T  ++         N  ++L  
Sbjct: 148 HQLTKRQQEKISKNYHHEKAQ-FDAQIASLASEIEVNHTSQKA-------KTNDLNVLFL 199

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQE-------RIVYKSTLELRENIHEQKNMLRH 243
           L  + ++ L   K L +K  +S+++  +QE       R++ + T EL     ++KN+   
Sbjct: 200 LQKNIKQRLEARKTLSQKQMISKSEYLEQEKELLEIRRLIAQQTSELNILDSQEKNLKER 259

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFA--DEMSKLTILEKTREQKTILSPIAGTIV 301
           +N    +   E+ +  K+    L   ++ +A  DE  +L I         + SP+ GT+ 
Sbjct: 260 LNAFQSQKQHEWNDKKKQSEIQLSMLEQEYAKFDEREQLEI---------VRSPVTGTVQ 310

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
              +++     Q +Q LM IVP + +     K+  K I  ++ G   TV+   FP+
Sbjct: 311 QLATYTLGAVLQPAQNLMVIVPDNDVQLAEVKILNKDIGFIRPGQNVTVKVDAFPY 366


>gi|158336321|ref|YP_001517495.1| HlyD family secretion protein [Acaryochloris marina MBIC11017]
 gi|158306562|gb|ABW28179.1| HlyD family secretion protein [Acaryochloris marina MBIC11017]
          Length = 531

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 161/407 (39%), Gaps = 69/407 (16%)

Query: 25  IIGIIGLITWS----ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           I GI+G    +     L  IE ++ ++G++  +  V  ++SP +G++K+ +VE G  + +
Sbjct: 60  IYGIVGAAAAALAWACLFEIEEAIPATGQLEPKGAVKAVQSPVTGVVKEIKVEEGDLVKK 119

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNL-----------RCHIDTEKSAL---DFLNNKYD- 125
           G  L+      T   I+  K   +NL           +   DT    L   + +N+  D 
Sbjct: 120 GDVLIVLNRKATRSEINSLKRQRRNLVQVNEYYRQQLKGQTDTPLPDLIDPELINSTRDR 179

Query: 126 ---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              V E      +    +    + +   +  N G+     S+     R+         +E
Sbjct: 180 QSLVAENKLFRAQLNGANNAQAFSAEERQRLNSGLLQGKTSVAAAQARVMQGDKQLRQIE 239

Query: 183 NKSSLLRALLSSHQKDLTMMKNLF-------EKNAVSQNDLNQQERIVYKSTLELRENIH 235
            +    +  L+S Q+ L + K +        +K A+++    +QE  V     E+     
Sbjct: 240 VQLEQTKIQLASAQQTLALNKEIVADIEDAHKKGAIARVQFKRQEDEVQSGEAEVSRLQQ 299

Query: 236 EQKNMLRHINELYDEANLEFANYLKEIS---RDL----------------------EQNQ 270
           EQ  +LR + ++  E     A  L  ++   RDL                        NQ
Sbjct: 300 EQIRLLRQMEQIGQEKLQSQAQALNTVATNQRDLLDRIAANQQRITEIDSQLTKAIVDNQ 359

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           RT AD  ++L   E T + + + +P+AG +   Q  S    A  S+P++KIVP   L   
Sbjct: 360 RTIADLENRLQQAELTLDYQELKAPVAGVVFDLQPSSPGFVANASEPILKIVPEDNL--- 416

Query: 331 RAKV--TPKQIQHVKKGYTATVR-----FPHYADIREKKFKAIIEKI 370
           +AKV  T K I  ++ G    VR     F  + DI     K  IE I
Sbjct: 417 KAKVYITNKDIGFIQTGMPVDVRVDSYNFSEFGDI-----KGTIESI 458


>gi|254477543|ref|ZP_05090929.1| type I secretion membrane fusion protein, HlyD [Ruegeria sp. R11]
 gi|214031786|gb|EEB72621.1| type I secretion membrane fusion protein, HlyD [Ruegeria sp. R11]
          Length = 389

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 80/415 (19%), Positives = 165/415 (39%), Gaps = 55/415 (13%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           R+  L    ++  + W+    ++  V + GE+++      +++   GI+ +  V  G ++
Sbjct: 17  RIIYLVAGALVVFLLWASFAWVDEIVRADGEVVSSSRSQIVQNLEGGILAELHVHQGDEV 76

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             G  L   +D                 R   D  +  +D L  K   LE   E      
Sbjct: 77  KAGQILARLQDT--------------KFRAAADDLQDRIDALEIKQYRLEAELE------ 116

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
               G +     +        +Y S +  L   ++ + +R   E+   +L  L   H   
Sbjct: 117 ----GAFDFDVPQELADRSPGIYTSERALLNARQTDFTSRR--ESAREILDQLKDEHAN- 169

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              M+ L++K  V+  ++N+ ++ V  +  +  E I  Q  +   + E Y +   E  +Y
Sbjct: 170 ---MQRLYKKEIVALIEVNRAQKAVSDAQAKYNE-IGTQSEL--ELAEDYSKTLRELTSY 223

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNYAQQSQP 317
            +E+    +Q +RT                   I SP+AG IV + S ++     +  + 
Sbjct: 224 RQELRLARDQLERT------------------VITSPMAG-IVNSLSVTTIGGVIRPGEE 264

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +++I+P  +  ++ A+V P+ I  V+ G  AT++   Y        +  ++ +     + 
Sbjct: 265 ILEIIPLGEEMFVEARVKPENIASVQPGQDATIKLSAYDYTIYGSLRGKVDFVSADTFED 324

Query: 378 DNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           + N + + YY V +K+    F++    IE+R G  A         T+ Q ++ P+
Sbjct: 325 ERNPRAEPYYRVTVKVDRSQFTERQQEIEIRPGMRATAELQTGTKTILQYLLKPL 379


>gi|282896359|ref|ZP_06304381.1| Secretion protein HlyD [Raphidiopsis brookii D9]
 gi|281198855|gb|EFA73734.1| Secretion protein HlyD [Raphidiopsis brookii D9]
          Length = 521

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 94/401 (23%), Positives = 178/401 (44%), Gaps = 74/401 (18%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M  L ++   G + W+    IE  V ++G++  E  V ++++P SG+++   V++G ++ 
Sbjct: 59  MITLMLVACFG-VGWAYYAKIEQVVPATGQLKPEGTVKDVQAPISGVVESIHVKDGQEVK 117

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE--------------KSALDFLNNKYD 125
           +G  LLTFE I T   +     S+ N+R  +  E               S L+FL     
Sbjct: 118 KGDLLLTFESIATRAELG----SLNNVRAVLIRENDIYRRLMNASSAVSSELNFLGGGLP 173

Query: 126 VLEKAF--ESR-----EEQLL-DFLGKYHSTCSK---------VFNYGISSVYRSLKMKL 168
             E AF  +SR     E QLL   LG  ++             V    + S   + K ++
Sbjct: 174 A-EAAFLLKSRISLVEENQLLRSQLGNSNAQVGGGIDEQQRLIVARKELESRSNAAKFEV 232

Query: 169 TRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
            +++       + R D +N  S+ + +L  H+ ++     L ++  +SQ     Q++ V 
Sbjct: 233 EKIKKQLSQTIVKRKDTQNSLSIQQGIL--HRVEV-----LAKEGGISQLQYLNQQQQVQ 285

Query: 225 KSTLELRENIHEQK----NMLRHINELYDEANLEFANYLKEIS--------------RDL 266
               E+ + + E+K    ++ R   E+ +   +   N L++I+              R +
Sbjct: 286 NLKAEIAQLLEEEKRLQFDIQRAQQEVANTVAVTDKNVLEQIATNKKRMAEIDSQFMRII 345

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            +N++  +D  SK++  +   + + + +P++G I   Q+ +    A  +Q L++IVP+ K
Sbjct: 346 LENEQRLSDINSKISQTKLNVKYQELRAPVSGIIFDMQAKNPGFVANPTQKLLQIVPNDK 405

Query: 327 LTYI-RAKVTPKQIQHVKKGYTATVR-----FPHYADIREK 361
             YI    +T K I  VK+G    VR     F  + DI+ K
Sbjct: 406 --YIAEVFITNKDIGFVKEGMKVDVRIDSFPFTEFGDIKGK 444


>gi|29421890|gb|AAO73519.1| RsaE [Caulobacter vibrioides]
          Length = 419

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 61/341 (17%), Positives = 144/341 (42%), Gaps = 27/341 (7%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           +  +G++ W+   P+E +V ++G +  + N   I+    G++ K  V  G Q+  G  L 
Sbjct: 26  LAFVGVLGWAAFAPLETAVIANGVVTTDANKT-IQHLEGGMLSKILVREGQQVKAGQCLF 84

Query: 86  TFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALDFLNNKYDVL-EKAFESREEQLLD- 140
             +  +      L +   V+ K L   +  E+     ++   ++L ++A       L+D 
Sbjct: 85  ELDPTQVNAAAGLTRAQYVAFKALEARLVAERDQRPTISFPTELLAQRADPVVARALIDE 144

Query: 141 ---FLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSS 194
              F+ +  +   +V  FN                 R+ + + +D +E ++  L+  L  
Sbjct: 145 QSRFIERRQTIAGQVDLFNA---------------QRAQFKSEIDGIERQAQGLKEQLGF 189

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q++L  ++ +++K  V +  +   ER     +  + +   ++   ++ + E   +    
Sbjct: 190 LQEELGDIRKIYDKGLVPRPRILALEREASSLSGAIGQLNADRSKAIQGMAETQLKIRQI 249

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              + +E+S  + + +   A+   +  +   ++++  I+SP+ G     + F+     + 
Sbjct: 250 REQFFEEVSEAIAETRVQLAEVSEREVVAADSQKRVNIVSPVNGVAQALRFFTEGAVVRP 309

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +PL+ I P  K   I A+  P  + ++  G T  VR P +
Sbjct: 310 GEPLVDIAPTEKAFVIHAQFAPTDVDNIHPGMTTEVRLPSF 350


>gi|239820610|ref|YP_002947795.1| type I secretion membrane fusion protein, HlyD family [Variovorax
           paradoxus S110]
 gi|239805463|gb|ACS22529.1| type I secretion membrane fusion protein, HlyD family [Variovorax
           paradoxus S110]
          Length = 445

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 88/431 (20%), Positives = 171/431 (39%), Gaps = 52/431 (12%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           + G++    W    P+  +V +   +  + N   ++    GI+++  V +G  + +G PL
Sbjct: 33  VCGLLPAAAWLGFAPLSSAVVAQAYVKVDLNRRPVQHAEGGIVREVLVRDGQHVRKGEPL 92

Query: 85  LTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF-ESREEQLLD 140
           L   D+      + +D +  + +     +D E++    +    DV+E A  + R    LD
Sbjct: 93  LVLGDVSVDADRNRLDHRVKTERASLARLDAEQTMARAIAFPPDVVETAVADPRLAAQLD 152

Query: 141 -----FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                F  +  +   +V       + RS + K+     I   R  +   S  ++      
Sbjct: 153 KERALFEARRDALVGQV------RLLRSQREKVA--EEIVALRAQIAQASESMK----FQ 200

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + DL   + L +   VS   + Q E  V    ++    I E++  L    +   +A+L  
Sbjct: 201 KSDLETNRKLLKDGFVSAARIAQFEGTVADYGVK----IEERRAELARAEQRTVDADLRI 256

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTI-----LEKTREQKT-------ILSPIAGTIVYN 303
                   R LE + R  A +  K+T      +E+ R + T       I +P +G I+  
Sbjct: 257 --------RSLESDYRQQASDQLKVTAARLAEIEQERRKSTDASARQVITAPASGEIIDL 308

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP--HYADIREK 361
           +  +        + +  +VP        A+V P+ I  V++G  A +RF    Y   +  
Sbjct: 309 KYSTPGAVIPPRETIADVVPDDSRLMTDARVRPEDIGRVQRGQAADIRFTAFKYRTTQLV 368

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
             K +    D +I +  N      YY V+++    + +   +++L  G PAE+    +  
Sbjct: 369 HGKVVYVSGDRLIDRATNA----PYYSVLVEADPASLATAGDLKLLAGMPAEIYLQGEER 424

Query: 421 TLAQEIIHPIT 431
           T  Q ++ PIT
Sbjct: 425 TALQYLVEPIT 435


>gi|170076540|ref|YP_001733179.1| HlyD family secreted protein [Synechococcus sp. PCC 7002]
 gi|169887402|gb|ACB01110.1| HlyD family secreted protein [Synechococcus sp. PCC 7002]
          Length = 532

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 46/197 (23%)

Query: 11  RNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           R  P +L R  +  I+G+ +  + W+ +  IE  V+++G++  +  V EI+SP +G++K+
Sbjct: 4   RQSP-TLSRTIIWVILGVTVSTVAWAAIAKIEQVVTATGQLQPQKTVQEIQSPINGVVKE 62

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             VE+G Q+  G  LLTF+        D    S K+L        SA+     K  +L+ 
Sbjct: 63  VFVEDGDQVEAGELLLTFDS-------DAAAASQKSL--------SAI-----KQSLLQ- 101

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM------RSIYLNRLDLEN 183
                E QL      Y +  S   N       ++L+ +LTR+      R++ LNRL L +
Sbjct: 102 -----ENQL------YRAILSNTAN------IQALQQQLTRINLPSEVRALALNRLSLIS 144

Query: 184 KSSLLRALLSSHQKDLT 200
           ++ +LRA +  +   L+
Sbjct: 145 ETQVLRAQIGENNSPLS 161



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 6/126 (4%)

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R   E  D A    A    E+++ + +N +  ++  S+L  + +T + + + +PIAGT+ 
Sbjct: 325 RSQREQVDGAQQRLAAIDSELNKMIVENSKRLSEVESQLAQVNETLKYQGVTAPIAGTVF 384

Query: 302 YNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA---TVRFPHYAD 357
             Q+       A Q++PL+KIVP   L      VT + I  V + + A   T R P  AD
Sbjct: 385 DLQAGPRFVPRAGQAEPLLKIVPDDALVA-EVFVTNRDIGFVLERFQAKQKTTR-PVSAD 442

Query: 358 IREKKF 363
           IR   F
Sbjct: 443 IRIDSF 448


>gi|157964017|ref|YP_001504051.1| HlyD family type I secretion membrane fusion protein [Shewanella
           pealeana ATCC 700345]
 gi|157849017|gb|ABV89516.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           pealeana ATCC 700345]
          Length = 437

 Score = 59.7 bits (143), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 85/384 (22%), Positives = 155/384 (40%), Gaps = 67/384 (17%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDT 112
           V +I+S   GI+K+  V  G  +  G PLL  +++      D  +++  ++K  +  +D 
Sbjct: 55  VQQIESLDGGILKQVLVREGQSVSAGEPLLLLDELRFASAYDEANIQAAALKRQKARLDA 114

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E S++                    ++D    Y      +    IS++  S+    TR +
Sbjct: 115 EISSV--------------------VIDDAASYWRDKVLIKPKAISALDVSVS---TRSK 151

Query: 173 SIYLNRLD-----LENKSSLL--------------RALLSSHQ---KDLTMMKNLFEKNA 210
           +IY +RL      LE  + ++              +A LS  Q   +++ M +    + A
Sbjct: 152 AIYRSRLSQLSSQLEQSAQVIEQKVQAIEEGLITTQAQLSGLQLVKQEIVMTRAAVREGA 211

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++ +L + ER      + L+  +   K   R +    ++A  E+     +     E  +
Sbjct: 212 VAELELLKLER----DEIRLKGELSASKANGRQLRAAQNQAEAEYLTVALDFLSRAEAER 267

Query: 271 RTFADEMSKLTILEKT---REQKT-ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
               +E++ LT   KT   R  +T I+SPI G +      S     +  + +M IVP   
Sbjct: 268 NEVINELNALTESIKTLADRLARTQIVSPINGNVTNILVRSIGAVVEPGESIMGIVPQDG 327

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              I  ++ PK I  V  G  ATV+F  Y  +     K  +  + P   Q D+      Y
Sbjct: 328 ALIIETRIAPKDIAFVHTGLQATVKFTAYDFVIYGGLKGEVIYVSPDAQQLDDG---TTY 384

Query: 387 YEVILKITDLAFSDNNIELRNGFP 410
           +E  +K      ++ N+   NG+P
Sbjct: 385 FEAHIK------TEENV--LNGWP 400


>gi|313108759|ref|ZP_07794751.1| metalloprotease secretion protein [Pseudomonas aeruginosa 39016]
 gi|310881253|gb|EFQ39847.1| metalloprotease secretion protein [Pseudomonas aeruginosa 39016]
          Length = 443

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 74/418 (17%), Positives = 169/418 (40%), Gaps = 20/418 (4%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L ++G +G + W+ L P++  V  SG ++   +   ++ P  G+++  +V  G ++  G 
Sbjct: 31  LVLLGFVGFLLWAGLAPLDKGVGVSGTVMVAGSRKAVQHPTGGLVRHIRVHEGERVEAGQ 90

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            LL  +  +        +     L        ++L  L+ + D  EKA      +LL   
Sbjct: 91  VLLEMDATQA-------RAQADGLFAQYLAALASLARLSAERD--EKARIEFPAELLALD 141

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRA---LLSSHQKD 198
                T  +       S  R+L+++L  +  ++  ++  L+   + LR+     ++ ++ 
Sbjct: 142 DPRLPTLLEQQRQLHDSRRRALRLELDGLAETVAGSQAQLDGLQAALRSKEQQRAALEEQ 201

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  ++ L  +  V +N L   ER++ +   E+  ++    +  R I EL          +
Sbjct: 202 LRGLRQLASEGYVPRNRLLDSERLLAQVNGEIAGDLGSLGSTRRQILELRLRMAQRREKF 261

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            +E+   L   Q    +  ++L           + +P+AG ++  + F+        Q L
Sbjct: 262 QEEVRASLADAQVRAEELRNRLASARFDLANSEVRAPVAGLVLGQEVFTEGGVIAPGQQL 321

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQ 376
           M+I+P  +   + A++    +  V+ G    + F  +      + +  +  +  D ++ +
Sbjct: 322 MEILPERQPLLVDARLPVGMVDKVRVGLPVELMFSAFNQSTTPRVEGQVTLVSADRLLDE 381

Query: 377 QDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           +        YY V +++ +        +E+R G P E    +   +L   +  P+ D 
Sbjct: 382 RGEA----PYYRVRIRVGEEGVRRLAGLEIRPGMPVEAFVRSGERSLLNYLFKPLADR 435


>gi|190570554|ref|YP_001974912.1| secretion protein, HlyD family [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019200|ref|ZP_03335007.1| secretion protein, HlyD family [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190356826|emb|CAQ54193.1| secretion protein, HlyD family [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995309|gb|EEB55950.1| secretion protein, HlyD family [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 503

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 172/432 (39%), Gaps = 45/432 (10%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-ET 92
           WS + PI+ +V +SGE++   N   ++    GII K  V+ G  + +  PL+   D+ E 
Sbjct: 87  WSAIAPIDGAVHASGEVIVSSNRKIVQHLGGGIISKILVKEGQAVKKDEPLVLLSDVNEK 146

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +L  +K    + L   + TE + L  +    D LE + E +     + + K      K+
Sbjct: 147 ANLSIIK----EKLLSLLATE-ARLIAIRGDLDTLEFSDEVKRLSNDELVNKAIKNQVKL 201

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK------DLTMMKNLF 206
           FN    S+    K  + + R   LN    +  + L   L ++H++      +L   + L 
Sbjct: 202 FNSQRKSILG--KTDILQQRIKQLN----DELAGLNFQLNAAHKQYDLITEELETKRQLL 255

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE----I 262
           +   +S+  +   E    K   E+   +   ++ +  + +   E  LE  N   +     
Sbjct: 256 DSGHISKPHILALE----KQFAEIEGRVGHYRSAISQVQQKIGENELEIINVKNDAQERA 311

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           + +L++   + AD   +L + E +  +  I SP  G +   +  +     Q   P++ IV
Sbjct: 312 NAELKEVNTSIADLKERLMVAEDSLARTIIKSPQDGIVTDIRYHTEGGVIQSGVPILSIV 371

Query: 323 PHSKLTYIRAKVTPKQIQHV---KK------------GYTATVRFPHYADIREKKFKAII 367
           P      I AKV  + I+ +   KK            G    VR   Y+  R      I+
Sbjct: 372 PSDDDLIIDAKVLTRNIEEILSAKKKDSNIVSIDGLEGLKVKVRLSAYSARRLSLINGIV 431

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEI 426
             I P      ++ +   YY V + I     +   N+ L  G P EV    ++ TL   +
Sbjct: 432 NHISP---DALDDPRMGRYYSVRVVIPKSELAQFKNVYLYPGMPVEVYIVTQSRTLLSFL 488

Query: 427 IHPITDNWPKIF 438
             PI   + + F
Sbjct: 489 FTPIIATFDRSF 500


>gi|313683221|ref|YP_004060959.1| type i secretion membrane fusion protein, hlyd family
           [Sulfuricurvum kujiense DSM 16994]
 gi|313156081|gb|ADR34759.1| type I secretion membrane fusion protein, HlyD family
           [Sulfuricurvum kujiense DSM 16994]
          Length = 448

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 77/435 (17%), Positives = 181/435 (41%), Gaps = 48/435 (11%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L  + L  ++G+ G+  W    P+  +V++SG++    +   I+    GI+K   V++G 
Sbjct: 28  LGLIVLALLVGVFGV--WGAFAPLSSAVAASGKVSVASSNRMIQHLEGGIVKSILVKDGD 85

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSA---------LDFLNNKY 124
            +  G  L+  ++ +    + +          L   +  E+           LD + N  
Sbjct: 86  SVKAGQELIELDNTQADAQLQIVLAQYYENLGLESRLIAERDGKSSIVFDPDLDKMQNPA 145

Query: 125 DVL------EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
             L       + F +R +QL+D          +V N  I      L+ ++  + +I    
Sbjct: 146 SRLLIMEAQRREFHARAQQLID--------EKQVLNERIEQ----LRNQVEGLEAI---- 189

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             + +K+SL R    S+  ++   + L+++  + +  L   +R   ++  ++     +  
Sbjct: 190 --VASKTSLSR----SYNDEIKEWEVLYQQQLIDKMRLRDIKREKVRTDGDIANAKADIG 243

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                I+E+  +   +   +++E+  +L   Q   +D  +++  L+    +  + +P+AG
Sbjct: 244 RAKAQISEVKAQIIAQRQKFMQEVVSELGDVQAKLSDNRARIFALQDVSNRTKMTAPVAG 303

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   Q  +        + +M+IVP  +   I  K+    I +V +G  A ++FP ++ +
Sbjct: 304 IVTNLQMHTIGGIIPPGKAVMEIVPEGEPLIIDVKIAATDIVNVHEGLKAEIKFPGFSHV 363

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQE-YYEVILKITDLAFSD---NNIELRNGFPAEVL 414
             K    ++ ++  I      +  T+  YY   +++T     +   N++ ++ G P + +
Sbjct: 364 --KSLNVVMGELVQIAPDAVTDEATKSLYYPAKIRVTAEGQKELMRNHLAIQPGNPVDAM 421

Query: 415 FTAKNTTLAQEIIHP 429
               + T    +IHP
Sbjct: 422 IVVASRTFMDYLIHP 436


>gi|260430742|ref|ZP_05784714.1| type I secretion membrane fusion protein, HlyD family [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418183|gb|EEX11441.1| type I secretion membrane fusion protein, HlyD family [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 435

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 97/455 (21%), Positives = 187/455 (41%), Gaps = 66/455 (14%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           PA++  + L  ++G IG+  WS    +  ++ S G +  + N   I+ P  G++ +  V 
Sbjct: 15  PAAVGFIALAILVGGIGV--WSTKTHLAGAIVSQGVVEVQSNRQVIEHPDGGVVGELFVR 72

Query: 74  NGSQILQGTPLL----TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF--LNNKYDVL 127
           +G  + +G  LL    TF   E T +I+ +   +   +  ++ E+   D   L+ + D L
Sbjct: 73  DGDSVSRGDLLLRLDGTFLASEKT-IIESRLFELLARKVRLEAERDGADAAELDAQMDAL 131

Query: 128 EKAFESREEQLLD-----FLGKYHSTCSKVFNYG-----ISSVYRSLKMKLTRMR-SIYL 176
            +  E     L++     FL + ++   K+         I S     + +L  +R  + L
Sbjct: 132 TE-IEPIGADLIEGQKNLFLARSNTLTQKIEQLSKQRIQIESEIEGTQAQLAALRKQVEL 190

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK-----STLELR 231
              +L ++  LL   L+   +    +  L  + A    D+ + E  V +     +T E++
Sbjct: 191 IGNELADQKGLLAKGLTQASR----VSALQREEARLTGDIGRLEATVARLKGQIATTEIQ 246

Query: 232 ENIHEQKNMLRH--INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             I E  +  R   I EL D         ++    +L Q + +  + +S+L I       
Sbjct: 247 --IVELTSTRREQAIGELRD---------VQAQVAELSQRRLSLVERLSRLEIR------ 289

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
               +P+ GT+  NQ F++ +  Q  +P+M +VP      + A+V    +  +  G   T
Sbjct: 290 ----APVDGTVFGNQVFAAQSVVQPGEPMMYLVPEDTPLLVAARVDAIHVDQLYVGQPVT 345

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN-- 407
           +RFP + + RE        +I+  +     +  T E         ++   +  +E  N  
Sbjct: 346 LRFPAF-NQRETP------EIEGHVINVSADTLTDETTGFTFYRAEIVPDEGQLERLNGQ 398

Query: 408 ----GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               G PAE L      T    ++ P+TD + + F
Sbjct: 399 NLLPGMPAEALIKTDERTPLSYLVKPMTDYFNRAF 433


>gi|254463448|ref|ZP_05076864.1| type I secretion membrane fusion protein, HlyD [Rhodobacterales
           bacterium HTCC2083]
 gi|206680037|gb|EDZ44524.1| type I secretion membrane fusion protein, HlyD [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 396

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 82/416 (19%), Positives = 181/416 (43%), Gaps = 59/416 (14%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            I W+    ++  V + G  ++      I++   GI+ +  V+ G ++++   L      
Sbjct: 34  FIVWAAFAWVDEIVRADGSFISSSRPQIIQNLEGGILAELLVKEGDEVMKDDVLA----- 88

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL-LDFLGKYHSTC 149
                           R H    +S++D L  +       FE R  +L  +  G++  T 
Sbjct: 89  ----------------RLHGTQFQSSVDDLAEQI----TGFEVRRLRLEAELAGQFDFTI 128

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                   + +  S K  L   +S +++R D        +++L+   K+L +M+ + ++ 
Sbjct: 129 PSNLAMQAAGMVASEKALLRARQSDFVSRRDGA------QSVLNQAAKELDLMEKMLKRE 182

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            VS  ++ +  +    + ++  E + +         EL  E   E+++ LKE++  L+QN
Sbjct: 183 IVSLIEVTRARKAHADAKIKFDEVVTQ--------TEL--ERAQEYSDVLKELA-TLKQN 231

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVPHSKLT 328
            +   D++++ T+L         +SP+ G +V N S ++     +  + +++I+P  +  
Sbjct: 232 MKASTDQLNR-TVL---------ISPMRG-VVNNLSVTTIGGVVRPGEEILQIIPLDEEL 280

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEY 386
           ++ A+V P+ I ++++G  AT++   Y        KA +  I  D    ++  +     +
Sbjct: 281 FVEARVKPENIANIRRGQEATIKLSAYDYTIYGTLKARVGFISADTFKDERSRSPDGDPH 340

Query: 387 YEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
           Y+V LK+   + +D    +E+R G  A V       T+ Q ++ P+  +   + ER
Sbjct: 341 YKVTLKVDMNSLTDRQTGVEIRPGMQASVELHTGQKTVLQYMLKPLYKSKEALRER 396


>gi|163740441|ref|ZP_02147835.1| type I secretion membrane fusion protein, HlyD family [Phaeobacter
           gallaeciensis 2.10]
 gi|161386299|gb|EDQ10674.1| type I secretion membrane fusion protein, HlyD family [Phaeobacter
           gallaeciensis 2.10]
          Length = 438

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 72/356 (20%), Positives = 150/356 (42%), Gaps = 35/356 (9%)

Query: 16  SLKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           S +R  ++ +IG+I    G  TWS+   I  +V +SG I  + N   ++    GI+++  
Sbjct: 12  SARRPLMIGLIGVIILLGGFGTWSVATSIAGAVVASGRIEVDRNRQVVQHLDGGIVQEIL 71

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV-L 127
           VE G  + +G  LL  +  E    + + +  +  L   R  +D E+ + + +  ++D  L
Sbjct: 72  VEEGDTVAEGAVLLRLDAKELRSQLVITEGQLFELMARRARLDAERDSAETV--EFDTEL 129

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
               E+R E     +        ++F     SV R +     R   I    + +  + + 
Sbjct: 130 HDLSETRPE-----VADLMQGQVRLFEARKDSVAREIDQLEKRRTQIQDQIIGVRAQQAS 184

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            R  L   +++L   ++L ++         +L + E  +  S  EL     + +  +  I
Sbjct: 185 RRTQLDLIEEELANQQSLLDRGLAQAGTVLNLRRTEADLQGSLGELIATEAQAEGRITEI 244

Query: 245 N----ELYDEANLEFANYLKEI---SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +    +L  +   E    L+++     +L + +R   D +++L I           +P++
Sbjct: 245 DIEILKLGTQQREEAITRLRDLRYQELELAETRRALKDRLARLDIT----------APVS 294

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           G +   Q  +  +  + + P++ +VP  +   I A+V P  +  +  G   T+RFP
Sbjct: 295 GIVYGLQVHTPRSVIRAADPVLYLVPQDRPLVIAAQVAPTDVDQIFVGQAVTLRFP 350


>gi|149186449|ref|ZP_01864762.1| secretion protein, HlyD family [Erythrobacter sp. SD-21]
 gi|148830038|gb|EDL48476.1| secretion protein, HlyD family [Erythrobacter sp. SD-21]
          Length = 451

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 77/410 (18%), Positives = 162/410 (39%), Gaps = 27/410 (6%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +I W+    I+ +V   G ++    +  + S   G++++  V  G +++ G PLL  +  
Sbjct: 51  IIGWAAWAEIDRTVRGMGRVIASSELQVVSSLEGGVLEEILVRPGDEVIAGQPLLRLDPT 110

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL-GKYHSTC 149
           ET   +   + +   L   +    + +   + +Y        +R+ ++   L     +  
Sbjct: 111 ETGASLGSTEATALALDMKVARLTAEVTGRSPRYPAPANDEAARQLEIEKALYASRQANL 170

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S   + G + + RS +  +    +   +R     +S+L R      + +L  ++ L E  
Sbjct: 171 SSALSAGQAQLQRS-RQSVAEAEAAIASR-----QSTLTR-----TESELAAIRPLVENG 219

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA----NYLKEISRD 265
              +  L + E          R ++   +  L        EA    A    ++ ++ + +
Sbjct: 220 IEPRMSLTRAE----SDAASARSDLAGARAALGRTQAQVAEAGANLARIRQDWREQAASE 275

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L   Q  +    S L  L++  ++ T+ +P+ G +      +  +     +PL+++V   
Sbjct: 276 LAGAQAEYEARASTLPALQERFQRTTLRAPVGGKVSRVLVTTRGSAVNPGEPLVELVAQE 335

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               + A+++P+ I +V+ G  A V    Y        +  +  I P  S QD   Q+ E
Sbjct: 336 DSLLVEARISPQDIGNVRIGQKAKVGVTAYDQTVYGALEGEVSTISP-DSIQDP--QSGE 392

Query: 386 YYEVILKITDLAF--SDNNIELR--NGFPAEVLFTAKNTTLAQEIIHPIT 431
            Y ++   T  +     N +EL    G  A+V       T+ Q I+ PIT
Sbjct: 393 IYYLVRVTTQQSAIEGPNGMELAIGPGMVADVSLLGDKRTVLQYILTPIT 442


>gi|85716062|ref|ZP_01047038.1| type I secretion membrane fusion protein, HlyD [Nitrobacter sp.
           Nb-311A]
 gi|85697061|gb|EAQ34943.1| type I secretion membrane fusion protein, HlyD [Nitrobacter sp.
           Nb-311A]
          Length = 421

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 93/450 (20%), Positives = 180/450 (40%), Gaps = 78/450 (17%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++G   W    PI  +V +SG  +       I+    G+I + +V  G  +  G  L+  
Sbjct: 8   VLGFGVWGNTAPIAGAVVASGVFVATGQNKIIQHLEGGMIDEIKVHEGDTVEPGQILVKL 67

Query: 88  EDIETTDLIDLKKVSIKNLR-CHIDT-------EKSALDFLNNKYDVLEKAFESRE---- 135
           +   TT   +++++ ++N R   +D        E+S + F        E A +S++    
Sbjct: 68  D--RTTAKAEMQRLFLRNARLTAVDARLQAQVREESEVRFPP------ELAADSKDPQIR 119

Query: 136 ----EQLLDFLGKYHSTCSKVFNYGISSVYRSL-------KMKLTRMR-SIYLNRLDLEN 183
                QLL F  + ++T S++   GI    ++L       K++L+ +R  I L   D++ 
Sbjct: 120 SIVSAQLLAFTAQRNNTNSEI--AGIEDSIKALNERIAGSKVQLSGVRRQIALVEEDIKT 177

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K  LL A L      L + +N        Q +L  +   +     + +E I      +  
Sbjct: 178 KEHLLAAGLVRKPDVLLLQRN--------QANLEGEVGRIMGEIGDAKERI---SRAMEQ 226

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           IN +   A       + E+  +L        D   ++   +   ++ TI +P+ G +V  
Sbjct: 227 INGVRKTAIKTAVEQMHEVRGEL-------VDVRERMQSAKGVLDRTTIRAPVKGVVVKL 279

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +     +  +P+M+++P ++   I A+V P+ I  VK G  A VR            
Sbjct: 280 RFHTRGGVVEPGKPIMELLPLNEPLIIEARVRPQDIDSVKHGQEAMVR-----------L 328

Query: 364 KAIIEKIDPIIS--------------QQDNNLQTQEYYEVILKITDLAFSD-NNIELRNG 408
            A+ +++ P++S              ++       + Y V +++ +   +         G
Sbjct: 329 TALSQRVTPMVSGDVIYLSADTVADEKKSQQTGPSDIYVVRVRLHNAEVARIPGFHPTPG 388

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            PAEV       T  Q I+ PI D+  + F
Sbjct: 389 MPAEVFVKTTERTFFQYIMKPIEDSMSRAF 418


>gi|146338019|ref|YP_001203067.1| HlyD family secretion protein [Bradyrhizobium sp. ORS278]
 gi|146190825|emb|CAL74830.1| putative secretion protein (HlyD family); putative Proteases
           secretion protein [Bradyrhizobium sp. ORS278]
          Length = 445

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 78/428 (18%), Positives = 179/428 (41%), Gaps = 29/428 (6%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L++ G  G+  W+    I  ++ + G+I+ E NV +++ P  G++ + +  +G  +  G
Sbjct: 33  VLAVAG--GMGGWAATQQISGALIAPGQIVVESNVKKVQHPTGGVVGELRARDGDVVKSG 90

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLL 139
             ++  +D  T       K S+  +  ++D    AL     + +  ++ +      +QLL
Sbjct: 91  DIVVRLDDTVT-------KASLAIVTKNLD----ALQARAARLEAEQRGWAKILFPQQLL 139

Query: 140 DFLG-----KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL--- 191
           + +         ++ +K+F   ++   R  +    R R   L+  ++E  S+ + A    
Sbjct: 140 ERMSDPDVKSLTASETKLFEVRVNG--RIGQKAQLRERVAQLSE-EIEGLSAQVAAKDQE 196

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           ++  QK+L  ++ L+E++ V  + L   ER   +   E  + I  +      I+E   + 
Sbjct: 197 IALVQKELDGVRQLYEQHLVQLSRLTTLERDAARLNGERAQYIAARAQAKGKISETELQI 256

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                + + E+S+DL +      + + +    E    +  I +P  G ++ +   +    
Sbjct: 257 IQVDKDMVSEVSKDLRETTDKIGEFVERKVTAEDQLRRVDIRAPQDGMVLQSSVHTVGGV 316

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 +M IVP S    + AKV P+ I  ++ G    +R   +      +   ++ ++ 
Sbjct: 317 ITAGDTIMLIVPQSDDLQVEAKVNPQDIDKLQVGQKTLLRLSAFNQRTTPELNGVVSRVS 376

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           P ++        Q YY + + +     +   +++L  G P E      + T+   ++ P+
Sbjct: 377 PDVTTDQRT--GQSYYTIRVSMPPEEIARLGDVKLIPGMPVEAFVQTGDRTVISYLMKPL 434

Query: 431 TDNWPKIF 438
            D   + F
Sbjct: 435 HDQLMRAF 442


>gi|188582107|ref|YP_001925552.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium populi BJ001]
 gi|179345605|gb|ACB81017.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium populi BJ001]
          Length = 455

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/431 (18%), Positives = 173/431 (40%), Gaps = 34/431 (7%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           LS+  + G+  W+    I  +V + G+++ E +V +++ P  G++ +     G ++  G 
Sbjct: 41  LSVALVFGVGGWATFTDISAAVIAPGQLVVETDVKKVQHPTGGVVGELLAREGQRVAAGD 100

Query: 83  PLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKA-FESREEQL 138
            L+  ++ +T   +D+   ++  L   R   + E+  L  +    D++ +   +    +L
Sbjct: 101 VLIRLDETQTRANLDIVLKAMDELSARRARDEAERDGLKTITFPPDLVARIDTDPTVARL 160

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +D  G+     ++V   G       L+ ++ ++R   +  L  +  +      L  H+  
Sbjct: 161 ID--GESRLFAARV--AGREGQKAQLRERVDQLRQ-EIAGLTKQAAAKDREINLIGHE-- 213

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYK----------STLELRENIHEQKNMLRHINELY 248
           LT +++L+ KN V  + +   ER   +          ST   R  I E +  +  I+   
Sbjct: 214 LTGVRDLYAKNLVPLSRVTALERDAARLEGERGQLVASTASARGKIAETELQIIQID--- 270

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                       E+ +DL + +  +++   K    E   ++  + +P  G +      + 
Sbjct: 271 -------GEMRTEVGKDLAEIRGKWSELREKRVAAEDQLKRVELRAPQDGFVHQMSVHTV 323

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 S+P M IVP S    +  +V P+ I +V+ G  A +RF  +      +    + 
Sbjct: 324 GGLVVPSEPAMLIVPASDQLLVEVRVQPQDIDNVRVGQKAVLRFAAFNTRTTPEIDGEVV 383

Query: 369 KIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
           ++   ++Q       Q YY   ++I  D       + L  G P E        ++   + 
Sbjct: 384 RVSADVTQDPKT--GQSYYTARIRIREDQKERLKGLRLVPGMPVESFTQIGERSVLSYLT 441

Query: 428 HPITDNWPKIF 438
            P+TD   K +
Sbjct: 442 KPLTDQIAKAW 452


>gi|146305754|ref|YP_001186219.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           mendocina ymp]
 gi|145573955|gb|ABP83487.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           mendocina ymp]
          Length = 438

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 87/439 (19%), Positives = 167/439 (38%), Gaps = 57/439 (12%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           L+   G+ G   W+ L P++ +V +   +  +     ++    GI++   V +G  +  G
Sbjct: 28  LVVTFGLFG--GWATLAPLDGAVLAPAVVTVKSYRKTVQHLEGGIVRALNVRDGDLVEAG 85

Query: 82  TPLLTFEDIETTDLIDLKKVSI-------KNLRCHIDTEKSAL---DFLNNKYDVLEKAF 131
             LL  +D +     ++ +  +         LR        AL   DF  +  D   +  
Sbjct: 86  EILLELDDTQLRAEFEMVRSQLIALLAQESRLRAEQTDHNGALPVPDFAPD--DPRSQEA 143

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            + EEQ+  F  + HS   +V          S++ K           + LE + + L A+
Sbjct: 144 MANEEQI--FQTRRHSLAGEV----------SIREKTI---------VQLETQIAGLEAM 182

Query: 192 LSSHQK-------DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +SS Q+       ++  ++ L  +  +    L  QER++ +    LR  I E ++ +   
Sbjct: 183 VSSKQELARSYTDEIADLRTLLAEGFIDVQRLRDQERLLTR----LRSEIAEHQSAIAQA 238

Query: 245 NELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                EA L+       +  E++  L        +   +L   +   E+  + +P +G +
Sbjct: 239 RLRISEAGLQILQLNKAFASEVASQLGDTHNRVRELRERLLATQSRLERTQLRAPESGMV 298

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           +     +         PL+ IVP      + A + P  I  +  G TA +RF  + +   
Sbjct: 299 IGLAIHTIGGVIGAGTPLLDIVPAGAELIVEAHIAPTDIDRLAIGRTADIRFSAFKNSTT 358

Query: 361 KKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTA 417
              + ++  +  D +I           YY   L++T+    S   + L  G PAEVL   
Sbjct: 359 PVIEGLLTHLSADRLIDTASGT----PYYLGRLELTENGRASLGALTLLPGMPAEVLINT 414

Query: 418 KNTTLAQEIIHPITDNWPK 436
              TL   ++ P  D   +
Sbjct: 415 GERTLLNYLMQPAGDALAR 433


>gi|116249837|ref|YP_765675.1| hypothetical protein RL0071 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254485|emb|CAK05559.1| Hypothetical protein expD2 [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 449

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 96/441 (21%), Positives = 181/441 (41%), Gaps = 48/441 (10%)

Query: 24  SIIGIIGLIT-------WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           SI+G+  L T       W+   P+  +V + G  +   N   I+    GIIK+ +V  G 
Sbjct: 28  SIVGLTVLFTSFGGFGFWAATAPLASAVIAQGSFVATGNNKIIQHLEGGIIKEMRVSEGD 87

Query: 77  QILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            + +G  LLT +   +     ++ L+++ ++ +   +  E   L                
Sbjct: 88  TVKEGDILLTLDPTASRSNERMLQLRRLRLEAVVARLRAEAQGL---------------- 131

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISS---VYRSLKMKLT-RMRSIYLNRLDLENKSSLLR 189
           R+ QL D + K         N  I S   V+ S ++KL  ++  I  N   LE +    R
Sbjct: 132 RQFQLPDIVTKEAGDPD--INAIIQSQNVVFHSKQIKLEEQLNLIGKNIASLEFRFVGYR 189

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               S ++ L+++    E++  S+  L +   +     L +   I +    +  +N   +
Sbjct: 190 GQRESFERQLSLLTE--ERD--SKARLVKVGYMRKTDLLAIERAIADAMGDIARLNGELN 245

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEM-SKLTILEKTREQ----------KTILSPIAG 298
           E+  E A + +E    +  N++   D + +  T L+  REQ           TI SP++G
Sbjct: 246 ESEAEIAKFRQEAVIAVNSNKQAALDALETAETDLDSVREQMREAAGVLERTTIRSPVSG 305

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T+V +   ++       +P+M+I+P      + AKV    I  + +G TA++R       
Sbjct: 306 TVVRSYFHTAGGVITTGKPIMEILPSHVPLILEAKVLRTSIDQLHEGETASIRLTALNRR 365

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
                +  +  +     +++     ++ Y V + I D   +  +N     G PAEVL   
Sbjct: 366 TTPVLQGKVFYVSADSIEENAGASVKDVYIVRVGIPDSEIARVHNFHPVPGMPAEVLIQT 425

Query: 418 KNTTLAQEIIHPITDNWPKIF 438
              T  + +  PITD+  + F
Sbjct: 426 SERTFFEYLSKPITDSMSRAF 446


>gi|328544466|ref|YP_004304575.1| toxin/protease secretion system [polymorphum gilvum SL003B-26A1]
 gi|326414208|gb|ADZ71271.1| Putative toxin/protease secretion system [Polymorphum gilvum
           SL003B-26A1]
          Length = 444

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 167/434 (38%), Gaps = 70/434 (16%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED---- 89
           W+ +  I  +V ++G ++ E NV  ++    GI+++  V +G  +  G  LL  +D    
Sbjct: 39  WAAVTEIAGAVVATGTLVVETNVKAVQHQEGGIVRQIAVRDGDLVEAGDLLLRLDDTVTR 98

Query: 90  ----IETTDLIDL-----KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
               I T  L DL     + V+ ++ R  I                     E  + +LL+
Sbjct: 99  ANLAIVTRQLADLAAQEARLVAERDGRAEIVFGARPQGLQAADLAADLADVERSQVELLE 158

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLK----MKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 +   K     I    + ++     +L + R I L    ++++ + L  LL    
Sbjct: 159 ARRASRTGRKKQLEEQIRQFDKQVEGLEAQRLAKGREIEL----IDDELADLIGLLD--- 211

Query: 197 KDLTMMKNLFEKNAVS--QNDLNQQERIVYKSTL----ELRENIHEQKNMLRHINELYDE 250
                 K L  +N V+  Q D  + E   Y S +    + RE I E++ ++  I+   DE
Sbjct: 212 ------KKLVARNRVTALQRDKARLEGD-YGSLIAQIAQSREAISERRLLILQID---DE 261

Query: 251 ANLEFANYLKEISRDLE--QNQRTFA-DEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
           A  E    L+++   L   + QR  A D+++++ I           +P AG +      +
Sbjct: 262 ARAEVLEQLQDVRGRLARLEEQRIAAEDQLARIDIR----------APRAGYVHQLAVHT 311

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                   + +M IVP   L  + AKV P  I  +  G  ATVRFP +      +  A +
Sbjct: 312 IGGVVGAGETVMLIVPREDLLVVEAKVQPVDIDQLAPGRDATVRFPSFDQRTTPELAARL 371

Query: 368 E------KIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
                   +DP             YY   L I D  LA  D    L  G P E+    + 
Sbjct: 372 VTVAADLTVDPATGAG--------YYAARLAIPDAELARLDGQT-LVPGMPVEIFIRTRE 422

Query: 420 TTLAQEIIHPITDN 433
            T+   ++ P+ D 
Sbjct: 423 RTVLSYLVKPVADQ 436


>gi|220914857|ref|YP_002490165.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium nodulans ORS 2060]
 gi|219952608|gb|ACL62998.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium nodulans ORS 2060]
          Length = 460

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 86/432 (19%), Positives = 193/432 (44%), Gaps = 35/432 (8%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
            +L+  G++G  +W+ ++ ++ +V S G I+ E +   ++    G+I +  V++G  + +
Sbjct: 47  VILATFGVMG--SWAAVVRLDRAVISPGVIVAESSRKIVQHFEGGMILEVLVKDGQSVQE 104

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           G  LL  + +++    DL +  +     L   +  E++    L    +++ +    R E 
Sbjct: 105 GDVLLRIDPLQSRASADLFRTQLDAALILEARLRAEQNQASELELPPELIAR----RNEP 160

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKL----TRMRSIYLNRLDLENKSSLLRALLS 193
            +  + K  +         ++   RSLK +L     R++ +    + L  + + ++A + 
Sbjct: 161 AIARMIKDQTIQ-------LAERQRSLKSQLDLIDARVKQLKTEMVGLAVEKASVQAQVG 213

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYDEA 251
              ++L  +++L EK+ +  + L   ER   ++ LE  +  ++ E       I E   + 
Sbjct: 214 FINQELEGLRSLREKSLIPLSRLLVMER--ERTRLEGVIGRSVAETAKAQNAIGEAGMQI 271

Query: 252 NLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
             +    ++E++   L + ++  A+   KL + +    +  I +  +G +   + ++   
Sbjct: 272 T-QLKQKMQEVTTAQLLETRQKIAELREKLLVAQDVLRRHEIRASHSGVVQGLKVYTIGQ 330

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  +PLM+IVP S    I  + +P  ++ +  G  A V+FP +   R       ++ +
Sbjct: 331 VVRSGEPLMEIVPTSDRLVISVQFSPNDLEAIHAGMRAEVKFPTFQTRRTPAIFGTLKTV 390

Query: 371 --DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR--NGFPAEVLFTAKNTTLAQEI 426
             D +I    ++   Q Y+  I++I D     N+I+ R   G PAEV+ +A   T    +
Sbjct: 391 SRDRLI----DDTTKQAYFSGIVEI-DEHQVPNDIKHRLLAGLPAEVVVSAGERTALDYM 445

Query: 427 IHPITDNWPKIF 438
           + P+ D     F
Sbjct: 446 VAPLFDAMGHAF 457


>gi|332159752|ref|YP_004296329.1| HlyD family secretion protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325663982|gb|ADZ40626.1| HlyD family secretion protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861656|emb|CBX71834.1| alkaline protease secretion protein aprE [Yersinia enterocolitica
           W22703]
          Length = 443

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 94/445 (21%), Positives = 178/445 (40%), Gaps = 51/445 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+ N    L    LL   G IG + W+ L P++  ++  G I+  +N   ++    G I+
Sbjct: 20  LQTNSGRYLGLGALLVCGGFIGSLLWAGLAPLDKGIAVMGHIVVAENRKLVQPLQGGRIQ 79

Query: 69  KFQVENGSQILQGTPLLTFED---IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +  V  G  + QG  L+T +D   +   D +  + +S       +  E+  L  +     
Sbjct: 80  QLHVAEGDDVTQGQLLITLDDTALLSHRDNLQNQYLSALAQESRLTAEQHELPAITFPPA 139

Query: 126 VLE---KAFESR----EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           +L+   +A   R    ++QL  FL +  +  S +           L  ++TR  S    R
Sbjct: 140 LLQYPAQALVERNTVLQQQL--FLHRRQAQLSDIAR---------LSAQITRHES----R 184

Query: 179 LD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI-------VYKST--- 227
           LD L+      +      Q+ L  ++ L +   V+Q+ L + ER        + K+T   
Sbjct: 185 LDGLQVARGHNQRQFDLFQRQLQGVQLLAKNGHVAQSQLLEMERQAISLRANIEKNTSEI 244

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           LEL + I E +  +    E Y   N E     ++ +++LEQ          +L I E   
Sbjct: 245 LELHKQIGETEQHILQRREQYKSENREQLAKAQQNTQELEQ----------RLGIAEYEL 294

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           +   I +P++GT++     +        Q LM++VP+ +     A++    I  V  G  
Sbjct: 295 DNTRIYAPVSGTVIALAQHTVGGVVSTGQTLMELVPNGQPLLAEAQLPVSLIDKVMVGLP 354

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             + F  +      + +  +  +     Q  + L+   YY + + I     +   +E+R 
Sbjct: 355 VDLNFSAFNQSSTPRLQGSVLHVGADRIQNPHTLEP--YYPLTVAID---ITQTELEIRP 409

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITD 432
           G   ++       +L   +  P+TD
Sbjct: 410 GMSVDIFIRTGERSLLNYLFKPLTD 434


>gi|6624216|dbj|BAA88493.1| membrane fusion protein [Pseudomonas fluorescens]
          Length = 443

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/420 (16%), Positives = 162/420 (38%), Gaps = 26/420 (6%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL + G  G + W+ L P++  V+ SG+++   +   ++ P  GI+++ +V +G  +  G
Sbjct: 32  LLVLGGFAGFLGWAALAPLDKGVAVSGKVMVSGHRKTVQHPSGGIVERIEVRDGEVVSAG 91

Query: 82  TPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALDFLNNKYDVLEK----AFESR 134
             L+  ++      +   +   ++ +     +  E   L  +    ++L +    A  S 
Sbjct: 92  QVLIHLKETPLRGQMQSLRSQFIASQASEARLSAESEGLSAVVFGPELLNEPEAAATLSL 151

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + QL     +  +T  +     I+     L+       S  L R              ++
Sbjct: 152 QRQLFSSRAQALATEQQGLRETIAGAEAQLRGTRESQASKVLQR--------------TA 197

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             + L  ++ L     + +N L + ER+  +    + E+      + R + EL       
Sbjct: 198 MNEQLQGLRELARDGYIPRNRLLENERLYAQLDGAIAEDFGRIGQLQRQVLELRLRIRQL 257

Query: 255 FANYLKEISRDLEQNQRTFADEM-SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             ++ K++   L +  RT +D++ ++L   E         +P AG +V    ++     +
Sbjct: 258 GEDFQKDLRGQLAET-RTRSDDLRNRLASAEFELANSLARAPAAGVVVGLDVYTEGGVIK 316

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q LM IVP  +   + A+V  + +  V  G    + F  +      +    +  +   
Sbjct: 317 PGQALMDIVPQGEPLLVEARVPVQMVDKVHPGLPVELLFSAFNQSTTPRIAGEVTLVS-- 374

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
             +Q +    + YY +  +++       + +++R G P E        ++   +  P+ D
Sbjct: 375 ADRQVDERTDEPYYTLRAQVSAAGMRQLDGLQIRPGMPVEAFVKTGERSMLNYLFKPLLD 434


>gi|318603884|emb|CBY25382.1| ABC exporter for hemopore HasA, membrane fusion protein (MFP)
           family component HasE [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 443

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 94/445 (21%), Positives = 178/445 (40%), Gaps = 51/445 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+ N    L    LL   G IG + W+ L P++  ++  G I+  +N   ++    G I+
Sbjct: 20  LQTNSGRYLGLGALLVCGGFIGSLLWAGLAPLDKGIAVMGHIVVAENRKLVQPLQGGRIQ 79

Query: 69  KFQVENGSQILQGTPLLTFED---IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +  V  G  + QG  L+T +D   +   D +  + +S       +  E+  L  +     
Sbjct: 80  QLHVAEGDDVTQGQLLITLDDTALLSHRDNLQNQYLSALAQESRLTAEQHELPAITFPPA 139

Query: 126 VLE---KAFESR----EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           +L+   +A   R    ++QL  FL +  +  S +           L  ++TR  S    R
Sbjct: 140 LLQYPAQALVERNTVLQQQL--FLHRRQAQLSDIAR---------LSTQITRHES----R 184

Query: 179 LD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI-------VYKST--- 227
           LD L+      +      Q+ L  ++ L +   V+Q+ L + ER        + K+T   
Sbjct: 185 LDGLQVARGHNQRQFDLFQRQLQGVQLLAKNGHVAQSQLLEMERQAISLRANIEKNTSEI 244

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           LEL + I E +  +    E Y   N E     ++ +++LEQ          +L I E   
Sbjct: 245 LELHKQIGETEQHILQRREQYKSENREQLAKAQQNTQELEQ----------RLGIAEYEL 294

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           +   I +P++GT++     +        Q LM++VP+ +     A++    I  V  G  
Sbjct: 295 DNTRIYAPVSGTVIALAQHTVGGVVSTGQTLMELVPNGQPLLAEAQLPVSLIDKVMVGLP 354

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             + F  +      + +  +  +     Q  + L+   YY + + I     +   +E+R 
Sbjct: 355 VDLNFSAFNQSSTPRLQGSVLHVGADRIQNPHTLEP--YYPLTVAID---ITQTELEIRP 409

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITD 432
           G   ++       +L   +  P+TD
Sbjct: 410 GMSVDIFIRTGERSLLNYLFKPLTD 434


>gi|119357544|ref|YP_912188.1| secretion protein HlyD family protein [Chlorobium phaeobacteroides
           DSM 266]
 gi|119354893|gb|ABL65764.1| secretion protein HlyD family protein [Chlorobium phaeobacteroides
           DSM 266]
          Length = 393

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 15/239 (6%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++++   + LF    V+   LN+Q   +     E    + +Q  +   I EL      + 
Sbjct: 155 EQNMRTQRQLFLSRQVTLRILNEQLSGIVSLVKEGYAPLSQQHELELKIAELKSATASQL 214

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A    E+  D E+  R  A+E++             + SP +G +V  Q  +     Q  
Sbjct: 215 AQVQLEVEADAEKT-RALAEELAD----------TELRSPASGQVVGLQVQTVGAVIQPG 263

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPI 373
           Q +M IVP  +   I AKV P  I  ++KG    V F  +A   +   +A++  I  D I
Sbjct: 264 QKVMDIVPLHEGLLIDAKVAPHLIDSIRKGLPVDVSFSSFAHAPQLVVQAVVASISKDII 323

Query: 374 ISQQDN-NLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              Q N ++    YY   + +T     S  N +++ G P +V+      +L   +I P+
Sbjct: 324 TDPQTNPSMPGASYYLARIAVTPHGLNSLGNRQMQPGMPVQVVIKTGERSLLTYLIDPL 382


>gi|115523035|ref|YP_779946.1| HlyD family type I secretion membrane fusion protein
           [Rhodopseudomonas palustris BisA53]
 gi|115516982|gb|ABJ04966.1| type I secretion membrane fusion protein, HlyD family
           [Rhodopseudomonas palustris BisA53]
          Length = 452

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 11/187 (5%)

Query: 257 NYLKEISRDLEQNQRTFADEMSKLT----ILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           N   E  RDL    RT    +S+L+     +E    +  I +PI G +    +F+     
Sbjct: 269 NASTEAQRDL----RTVDARISELSERKVAIEDRLSRSEIRAPITGYVNELFAFTVGGVI 324

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             +  +  IVP +    +  K+ P  I  V+ G  A V    +      + +A + ++ P
Sbjct: 325 TPAARIATIVPENAQLKVEVKIAPVDIDQVRVGQRARVHLTSFNRATTPELQAAVAQVSP 384

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             S+  +    QEYY   +++ D A +    + L  G PAEV  + +  T A  ++ P T
Sbjct: 385 ASSR--DQASGQEYYVAYVQLADTATAQIEGLRLVPGMPAEVFISTQERTAASYLLKPFT 442

Query: 432 DNWPKIF 438
           D   + F
Sbjct: 443 DQMNRAF 449



 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 37/69 (53%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L ++ +IG   WS L  +E +V + G +  + N+ E++    GI+K   V  G  + QG 
Sbjct: 41  LVVLLVIGCGGWSALAMLEGAVIAQGAVKVDQNLKEVQHRDGGIVKTLAVRQGDFVQQGQ 100

Query: 83  PLLTFEDIE 91
            L T +D++
Sbjct: 101 VLATLDDVQ 109


>gi|238797452|ref|ZP_04640951.1| type I secretion protein [Yersinia mollaretii ATCC 43969]
 gi|238718723|gb|EEQ10540.1| type I secretion protein [Yersinia mollaretii ATCC 43969]
          Length = 389

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 86/394 (21%), Positives = 161/394 (40%), Gaps = 80/394 (20%)

Query: 18  KRMTL---LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +RM+L   L+++G+I +  W+    ++     +G++        I+S   GII +  V  
Sbjct: 15  QRMSLIVWLTLVGMIVMFVWAYFAILDEVTVGTGKVTPSSRAQLIESLDGGIINELLVHE 74

Query: 75  GSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           G+ I +G  L   +         E    +   + S + LR  +    +AL F     D L
Sbjct: 75  GAIINKGQILARLDPTRFQSNYGEAAARVRTLRASSERLRAELT--GAALAF---GADTL 129

Query: 128 -EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E    +RE Q       ++ +  +  N  +S++ +SLK+                    
Sbjct: 130 KEPELVARETQ-------FYLSRRQNLNETVSNLQQSLKL-------------------- 162

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                    Q++L M + L  K A SQ ++ + +R +     +LR  I E +N       
Sbjct: 163 --------VQQELRMTEPLVAKGAASQVEVIRLQRQIS----DLRGKIDEARN------- 203

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ---KTILSPIAGTIVYN 303
                  ++A       R  E+  +  AD  ++L ++   ++Q    T++SP+ G +   
Sbjct: 204 -------QYA------VRAREEQVKNNADLDAQLQVVSGKQDQLTRTTLISPVRGIVKDI 250

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           Q  +     Q    LM+IVP  +   I  ++ P+ I +++ G  ATV+   Y        
Sbjct: 251 QVSTVGGVLQPGGKLMEIVPIEEQLLIETRINPRDIAYIRPGLAATVKITAYDSSIYGNL 310

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
             ++E + P  + QD   + Q YY + ++ TD A
Sbjct: 311 TGVVETVSP-DTLQDEIKRDQFYYRIYIR-TDRA 342


>gi|163795696|ref|ZP_02189661.1| RsaA secretion system, membrane protein RsaE [alpha proteobacterium
           BAL199]
 gi|159178992|gb|EDP63527.1| RsaA secretion system, membrane protein RsaE [alpha proteobacterium
           BAL199]
          Length = 457

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 90/426 (21%), Positives = 176/426 (41%), Gaps = 69/426 (16%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE---DIETTDL 95
           P++ SV ++GE+  E++   ++ P  GI+ +  V  G ++ QG  LL  +   D   ++ 
Sbjct: 58  PLQSSVMATGELRVENSRKIVQHPEGGIVAEINVREGQRVEQGEVLLRLDPTRDRAQSNT 117

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +  + +     +  +  E+ AL+ ++   +VL +  +    +L+D               
Sbjct: 118 LRRRYLGALAEQARLLAERDALESIDFPKEVLNELGDPEIAELVD--------------- 162

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           G  +V+RS +     +  + L+++D        +A +++ + +L+ ++        +Q D
Sbjct: 163 GQRAVFRSRQASRDGLVKLMLSQVDQA------KAQINATKVELSALQ--------TQAD 208

Query: 216 LNQQE----RIVYKSTLE----------LRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           L  QE    R +Y+  LE           +  I  Q   L      Y++   EF   + +
Sbjct: 209 LIAQELGSVRELYEKGLERLPRLLSLQRTQAAIRGQTGRLNGSIAQYEKQISEFEQRVVQ 268

Query: 262 ISRDLEQNQRTFADEMSKLTI-LEKTREQKTILS----------PIAGTIVYNQSFSSSN 310
           + RDL   QR  A ++  +   L+   EQ+ ++S          P  G ++    F+   
Sbjct: 269 MERDL---QREVAVQLDAVGARLQDLNEQRPVISASVRRLDIRAPRTGRVIDLHVFTIGQ 325

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT-ATVRFPHYADIREKKFKAIIEK 369
                +PLM+IVP  +   +  KV P+ I  +  G T   VR   ++       +  +E 
Sbjct: 326 VIGGREPLMQIVPEDEDLVVYVKVKPRDIDSLNNGVTKVQVRMTSFSQRFTHPIEGYLES 385

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFTAKNTTLAQE 425
           I     Q  +   +  YY  I+++   A S  +I     L  G PA  +      TL   
Sbjct: 386 ISSDSVQDPDG--SPPYYRAIIRLD--ATSREHILHDTALTAGMPAMAMIGVGEKTLLTY 441

Query: 426 IIHPIT 431
           +I P++
Sbjct: 442 LIEPLS 447


>gi|122042281|gb|ABM65823.1| MadC [Mesorhizobium sp. R88B]
          Length = 445

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 94/446 (21%), Positives = 186/446 (41%), Gaps = 50/446 (11%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           PA +  + +++  GI G   W+ L P+  +V +   +  E N   ++    G +K+ +V+
Sbjct: 26  PAYVGLLIIVAFFGIFG--GWAALAPLNGAVLADAIVKVEGNRKSVQHFDGGTVKEIRVK 83

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLK-------KVSIKNLRCHIDTEKSAL---DFLNNK 123
           +G  + +G  +L  +D       +L        + +   +R  +D   +     D L   
Sbjct: 84  DGDVVRKGDIMLKLDDTRIRSEFNLYAQQYALLRATDARIRAELDGSAAVAFPKDILKEH 143

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCS--KVFNYGISSVYRSLKMKLTRMRSIYLNRLD- 180
            D L  A  +   Q+ D   +  S     ++    I+ +   ++ K +R+ S Y  +L  
Sbjct: 144 EDYLRDAMAN---QIADLESQRASMAGARQILERRIAELEEQIQGKQSRVES-YRAQLQS 199

Query: 181 -LENKSSL---LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            ++ K+SL   L+A L++  + L +     E++A     L             + EN+  
Sbjct: 200 TIDEKASLSKLLKAGLTTRPRILEL-----ERSASDLQGL-------------IDENLGA 241

Query: 237 QKNMLRHINELYDE-ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
                +   EL  + A L F    K +S  L + Q   AD + K+   +   ++  + +P
Sbjct: 242 IGGSQQSKAELESQIAQLTFERRAK-LSAMLIETQSNLADLVPKMFAAQAAMDRAEVRAP 300

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G ++    FS        Q ++ IVP      ++A+V  + I +++    A VRF  Y
Sbjct: 301 YDGQVMDLSVFSIGAIVSPGQTILDIVPTENSLIVQAQVRVEDISNLRPDMAAEVRFTSY 360

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYY--EVILKITDLAFSDNNIELRNGFPAE 412
              +++    I  ++  I + +  + +T   YY  +V +   +LA + + I L  G PA 
Sbjct: 361 ---KQRSIPIIHGRVTRISADRITDSKTGFPYYLADVAVDPGELAAA-SQIALYPGMPAS 416

Query: 413 VLFTAKNTTLAQEIIHPITDNWPKIF 438
           V+   +  T    II P+  ++   F
Sbjct: 417 VMIVTEERTALDYIIGPLVVSFHSAF 442


>gi|149911638|ref|ZP_01900249.1| HlyD family secretion protein [Moritella sp. PE36]
 gi|149805308|gb|EDM65322.1| HlyD family secretion protein [Moritella sp. PE36]
          Length = 455

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 78/389 (20%), Positives = 154/389 (39%), Gaps = 46/389 (11%)

Query: 19  RMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+T+ ++   ++  I W+    ++   +  G+++    +  I+S   GI+++  V+ G+ 
Sbjct: 27  RLTIWALAAFVLSFIVWAYFAKLDRVATGMGKVVPSSQIQIIQSLDGGILQELYVQEGAL 86

Query: 78  ILQGTPLLTFEDIE---------------TTDLIDLKK-------VSIKNLRCHIDTEKS 115
           + +  PL   +D                   D+I L+          + N +  I   K+
Sbjct: 87  VTKNQPLARIDDTRFRADLAQQRQEVDSLRADIIRLRSELSSILVADVPNWQLQIKITKT 146

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           AL F ++    L      ++++   +  +  S  + V   G     R  + K        
Sbjct: 147 ALTFPDDLQQNLPYLVTRQQDE---YRARLDSLTNLVAIQGQQIQQRVEETK-------- 195

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
               +L++K   L        ++L + + L +K  +S+ +L + ER    S   ++  ++
Sbjct: 196 ----ELKSKIKTLEVSYKLASRELALTRPLAKKYIISEVELLKLER----SVNSIKGELN 247

Query: 236 EQKNMLRHINELYDEANLE----FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             + M+  +  +  EA L+      NY  +    L + Q  F+         E    +  
Sbjct: 248 SIRLMVPKLQSVMAEAVLKRREAVLNYRADARAQLNELQSKFSRITEAKVGAEDKVNKAL 307

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I+SP+ GTI      +     Q  Q L++IVP      I AK+ PK I  +  G TA V+
Sbjct: 308 IVSPVVGTIKTLHINTLGGVIQPGQALLEIVPTEDKLLIEAKIKPKDIAFIHLGLTAVVK 367

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNN 380
              Y   R    K ++E I    +Q ++ 
Sbjct: 368 ITAYDFTRYGGLKGVVEHISADTTQDEDG 396


>gi|51473509|ref|YP_067266.1| alkaline proteinase secretion protein [Rickettsia typhi str.
           Wilmington]
 gi|51459821|gb|AAU03784.1| alkaline proteinase secretion protein [Rickettsia typhi str.
           Wilmington]
          Length = 511

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 105/449 (23%), Positives = 180/449 (40%), Gaps = 34/449 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLIT-----WSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           RN+ A   R  +L  I +I  +      WS L P++    + G ++   N   I+    G
Sbjct: 73  RNNVAQAARSPILFGIYVIIFLVLIGGLWSALAPLDSGAVAIGIVIPSTNKKTIQHNEGG 132

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           II    V+ G ++ +G  L+   ++E T +    +  +   R  + TE    + L  + D
Sbjct: 133 IINAIYVKQGDKVSEGDKLI---ELEETRIKSEHENILSQYRNFLATE----NRLIAERD 185

Query: 126 VLEK-AFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-L 181
            LE+ AF     Q ++   + K   T   +F      +Y S K  L +  +    +++ L
Sbjct: 186 NLEQIAFSDLLIQNMNLPEVAKIIHTQENLFKSR-KEIYLSEKDALNQNIAQLEKKIEGL 244

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E K        + +Q  L  ++ L EK  + +  L +QE  V  +    + ++   +  +
Sbjct: 245 EAKKISASKTAAVYQDRLKALRTLKEKGFIQKAALLEQEAKVAAA----KSDVATTEAEI 300

Query: 242 RHINELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             I     E  ++  N    Y +    +L + Q   A    K   L     +  I SP+ 
Sbjct: 301 AGIRHAITETQIKIINHQNKYTERTLTELREAQIQTASLKEKYNSLTDLLNRVIIRSPVD 360

Query: 298 GTIVYNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           G IV N  + +        QP+M+I P +    I A+++ K I  V +G  A +RF  + 
Sbjct: 361 G-IVNNLKYHTIGGVISHGQPIMEISPINDPLIIEARISQKNIDSVHEGLIAKIRFSAFK 419

Query: 357 DIREKKFKAIIEKIDPII---SQQDNNLQTQEYYEVILKITDLAFSD----NNIELRNGF 409
                 F   +  I P I    +Q    Q   YY   ++I    F+      N+ L  G 
Sbjct: 420 SRTTPTFTGRVVSISPDIVHDERQHPGYQQDNYYVARVEINMEEFNKVAKVKNLALHPGM 479

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            AEV       TL + ++ P+TD   K F
Sbjct: 480 QAEVQIVTGTRTLLRYLLDPVTDTAFKAF 508


>gi|160897521|ref|YP_001563103.1| HlyD family type I secretion membrane fusion protein [Delftia
           acidovorans SPH-1]
 gi|160363105|gb|ABX34718.1| type I secretion membrane fusion protein, HlyD family [Delftia
           acidovorans SPH-1]
          Length = 458

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/349 (19%), Positives = 139/349 (39%), Gaps = 28/349 (8%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           +L R   L +I +  L+   +  P+E  V +SG+++  D V  ++    GI+    V  G
Sbjct: 43  ALARGKWLLVIPVAALVVTGLFYPVENVVVASGQVIPSDRVQTVQHLEGGIVTAVHVREG 102

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + QG PLL   D+ +  L      +++ L   + T ++    L  +        + R 
Sbjct: 103 QAVTQGQPLLEI-DLGSNSL------NLEQLTARMATAQAVKARLGAES-------QGRP 148

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN---RLDLENKSSLLRAL- 191
            Q   F     +   +      S+  R+L+ + +   +       R D+    + +  L 
Sbjct: 149 LQRTAFPADLDAQVVQAELGAFSA--RALEHQGSLAAAQAQLQQARGDVAQVQARIEGLE 206

Query: 192 --LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINE 246
             L  HQ++ ++   L  +  + Q ++  ++R + +   EL   R+ +   +  +     
Sbjct: 207 TNLRLHQQEASIAGQLASEQLIGQLEVLDKQRALEQVRAELAASRQTLFSNRAKIEQAQA 266

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              E    F    +  S +L Q +R  A     L      R +  +L+P +G +   +S 
Sbjct: 267 KLQETQGAF---RRRASDELAQTERELASLNEDLVRARTQRTRTAVLAPTSGFVKGLRSS 323

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +    +  +P+++IVP      + A+++P    +V  G    V+   Y
Sbjct: 324 GAGWVVKPGEPILEIVPDKDEVIVEARLSPADRGYVHPGQATRVKISAY 372


>gi|110597469|ref|ZP_01385756.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
 gi|110341013|gb|EAT59484.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
          Length = 392

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 91/412 (22%), Positives = 151/412 (36%), Gaps = 76/412 (18%)

Query: 25  IIGIIGLITWSILLPIEISVSSSG--EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           ++G  G + W+   P++  V   G   I  +  VVE      G I+K  V  G  + QG 
Sbjct: 40  LVGFGGFLLWAAFAPLDEGVPCQGIVSIATKRKVVEHLR--GGSIEKVHVREGQMVRQGD 97

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L+T E                       T K+  D  +  Y                  
Sbjct: 98  LLVTLER---------------------QTAKARFDEAHQHY------------------ 118

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                        GI +    L  +L   RSI  +  DL N     R L    Q++++  
Sbjct: 119 ------------LGIRATADRLHAELRGARSITFHP-DLLNDPD--REL---AQRNMSNE 160

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + LF     + N LN Q   +     E    + +Q+ +   I+E       + A  L E+
Sbjct: 161 RQLFISRQTTLNLLNAQLAGITSLVKEGYAPMSQQRELELKISEFKSATASQLAQMLLEV 220

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
             D  ++ +  A E++             I SP +G +V  Q  +     Q  Q +M IV
Sbjct: 221 EADAVKS-KVLAAELAD----------TEIRSPASGQVVGLQVQTVGAVVQPGQKIMDIV 269

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNN 380
           P ++   I AKV P  I  ++KG    V F  ++   +   + ++E +  D I   Q N 
Sbjct: 270 PSNEGLLIDAKVAPHLIDSIQKGLPVDVSFSSFSHSPQLVVQGVVESVSKDIITEPQMNP 329

Query: 381 LQTQE-YYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           +Q    YY   + +T     S  + +++ G P  V+      +L   +I P+
Sbjct: 330 MQPGATYYLARVTVTPQGMRSLGHRQMQPGMPVIVVVKTGERSLLVYLIDPL 381


>gi|218462618|ref|ZP_03502709.1| protein secretion protein, HlyD family [Rhizobium etli Kim 5]
          Length = 447

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 91/448 (20%), Positives = 180/448 (40%), Gaps = 41/448 (9%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           H A +  ++L  + GI G   W+    +  +V   G ++ + +V +I+ P  GI+ K  V
Sbjct: 16  HVAVVGALSLALVCGIGG---WAATTELSSAVIGEGVVIVDGDVKKIQHPTGGIVSKLLV 72

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLN---NKYDV 126
                +  G  L+  +   T   + + + ++  L   R  +  E+   D      N  D+
Sbjct: 73  AENDHVSAGQVLIRLDGTTTKAQLSIVESTLAQLYARRARLKAERIGADSFKVEENISDL 132

Query: 127 L--------EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           +        + A  +  + LLD   K   +       G+ S   S K +L       + +
Sbjct: 133 MTSSAAASNKAASRNAAQDLLDGEQKLFDSRRSAL-VGMKSQLASRKDQLAEQIKGLVVQ 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER----IVYKSTLELRENI 234
           ++  N S      LS  +++L  +  L++K  V+   LN  +R    +   S  E+    
Sbjct: 192 INATNDS------LSLIEQELEGVDALYKKGLVTLQRLNALKRARADLQGNSGQEIAAKA 245

Query: 235 HEQKNML---RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +   +   R   +L ++   E A  L ++   + +N+      + +L  L+       
Sbjct: 246 EAEGKAIEIDRQSIQLDEDRRSEIAKELTDVEAKIAENEERRETALDQLRRLD------- 298

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P++G +      + +   +  Q LM +VP +    ++AKV  + I  +  G +  VR
Sbjct: 299 ITAPLSGRVHELAVHTINGVIEPGQTLMLVVPENDDLTVQAKVATRDIDQLHVGQSVDVR 358

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFP 410
           F  +        +A+I  I P   + +       YY + +K    + +   +I+L  G P
Sbjct: 359 FSAFDQRTTPDVRAVITSIAPDTVKDERT--GISYYPLRVKPEAQSIAKLKSIKLYPGMP 416

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           AEV     + T+   +  P+TD    +F
Sbjct: 417 AEVFIKIADRTVISYLTKPLTDQMQHVF 444


>gi|163741950|ref|ZP_02149339.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Phaeobacter gallaeciensis 2.10]
 gi|161384671|gb|EDQ09051.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Phaeobacter gallaeciensis 2.10]
          Length = 389

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 78/422 (18%), Positives = 161/422 (38%), Gaps = 53/422 (12%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R       R+  L    ++  + W+    ++  V + GE+++      +++   GI+ + 
Sbjct: 9   RETSRGASRIIYLVAGALVVFLLWASFAWVDEIVRADGEVVSSSRSQIVQNLEGGILAEL 68

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G  +  G  L   +D +               R   D  +  +D L  K   LE  
Sbjct: 69  HVHQGDAVKAGQILARLQDTK--------------FRAAADDLQDRIDALEIKQYRLEAE 114

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            E          G +     +        +Y S +  L   ++ + +R D        R 
Sbjct: 115 LE----------GAFDFNVPEELADRSPGIYTSERALLNARQTDFTSRRDS------ARE 158

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
           +L   + +L  MK L +K  V+  ++N+ ++ V  +  +  E I  Q  +   + E Y +
Sbjct: 159 ILDQLKDELANMKRLHKKEIVALIEVNRSQKSVSDAQAKYNE-IGTQSEL--ELAEDYSK 215

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              E  +Y +E+    +Q  RT                   I SP+AG +      +   
Sbjct: 216 TLRELTSYRQELRLAQDQLNRT------------------VITSPMAGIVNSLAVTTIGG 257

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  + +++I+P  +  ++ A+V P+ I  V+ G  AT++   Y        +  ++ +
Sbjct: 258 VIRPGEEIVEIIPLGEEMFVEARVKPENIASVQPGQDATIKLSAYDYTIYGSLRGKVDFV 317

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIH 428
                + + N + + YY V +K+    F++    IE+R G  A       + T+   ++ 
Sbjct: 318 SADTFEDERNPRAEPYYRVTVKVDRSEFTERQQAIEIRPGMRATAELQTGSKTILNYMLK 377

Query: 429 PI 430
           P+
Sbjct: 378 PL 379


>gi|227327234|ref|ZP_03831258.1| putative type I secretion protein [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 389

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 89/420 (21%), Positives = 164/420 (39%), Gaps = 75/420 (17%)

Query: 23  LSIIGIIGLITWSILLPI-EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LS++G+I    W+    + E+SV S G++        I+S   GII +  V+ G+ + +G
Sbjct: 23  LSLLGLIVFFIWATFAVLDEVSVGS-GKVTPSTRAQVIESLDGGIIGQIYVQQGNVVEKG 81

Query: 82  TPLLT-----FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
             L       F+ +       ++ +     R H +   + L F  +   + E A  +RE 
Sbjct: 82  QVLAQLDINRFQSVYGEAFSRVQTLRASAERLHAELSGAPLKF--SAETMKEPALAARER 139

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           QL      Y S                      R+R+      +L+    L+       +
Sbjct: 140 QL------YES----------------------RLRNRDETVANLQQSMRLV-------E 164

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L M + L ++ A S  ++           + LR  I E +  +       DEAN ++A
Sbjct: 165 QELRMTEPLVQRGAASAVEV-----------IRLRRQISEIRGKI-------DEANNQYA 206

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ---KTILSPIAGTIVYNQSFSSSNYAQ 313
                  R  E+  +  AD  +++ ++    +Q    TI SP+ G +   Q  +     Q
Sbjct: 207 ------VRAREEQVKNNADLEAQMEVVSGKADQLKRATITSPVRGIVKDIQVTTVGGVLQ 260

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               LM+IVP      I  ++ P+ I +++ G  ATV+   Y           +E + P 
Sbjct: 261 PGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKITAYDSSIYGNLTGEVESVSP- 319

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIHPI 430
            + QD   + Q YY + ++ T    ++   E   +  G  A V       ++   +I P+
Sbjct: 320 DTLQDEVRRDQFYYRIYVRTTQAELTNKAGEKFPIVPGMVASVEIKTGQKSVMDYLIKPL 379


>gi|260463992|ref|ZP_05812187.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium opportunistum WSM2075]
 gi|259030163|gb|EEW31444.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium opportunistum WSM2075]
          Length = 439

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 88/452 (19%), Positives = 178/452 (39%), Gaps = 51/452 (11%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +++R   A    + LL  +G  G   W++  P+  +V + G I      + I+ P  GII
Sbjct: 15  DIRRVASAGYAAIALL--VGCFGY--WAVTAPLSGAVITQGTISATGGNILIQHPEGGII 70

Query: 68  KKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           ++  V  G ++ Q   L+  +        + +  + ++++     ++ E+  LD L    
Sbjct: 71  QELLVHEGDRVQQAQDLIVLDPTAARAELNRLTRQSIALRASAARLEAERDGLDRLAPIT 130

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR---SIYLNRLDL 181
           +     F+   E L++          K F+            +L R R   SI + R+ +
Sbjct: 131 ETAPAPFQRDFETLVE-------EQQKEFD-----------ARLARFRSEQSILVQRVAM 172

Query: 182 ENKSSL--------LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
             +S +        ++      +K+L +   L ++   ++++ +Q    + +S  +L   
Sbjct: 173 HRQSVVGLQAQKQAIQQQADVVKKELGIKTGLLDRGLTNRSEYSQ----LLRSEADLVGQ 228

Query: 234 IHEQKNMLRHINELYDEANLE----FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               +  L   N    EA  +        ++E    L+  +   AD   ++   E    +
Sbjct: 229 AGALEAYLATANTQIVEAQEQTEHLATQRVEEALTKLDDVRSNLADIEEQIRAAEAVLRR 288

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            TI +P AG +V +   S  +     + +M+I+P +    + A++ P  I  V+ G  A 
Sbjct: 289 TTIKAPAAGIVVSSTYNSKGSVVAPGEKIMEILPTAPGLVVDARLRPNDIDQVRVGQPAK 348

Query: 350 VRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE-LR 406
           +R          +  A + +I  D +I Q  +    + Y+   LKI     S    E L 
Sbjct: 349 LRLSALNTRLTPEVSATVTQISADRLIDQATH----EPYFRARLKIAAALPSGVKPEQLY 404

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            G P E      + T  Q +  P+ D++ + F
Sbjct: 405 PGTPVEAFINTGDRTFFQYLARPMLDSFARAF 436


>gi|254482413|ref|ZP_05095653.1| type I secretion membrane fusion protein, HlyD family [marine gamma
           proteobacterium HTCC2148]
 gi|214037418|gb|EEB78085.1| type I secretion membrane fusion protein, HlyD family [marine gamma
           proteobacterium HTCC2148]
          Length = 469

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 89/429 (20%), Positives = 184/429 (42%), Gaps = 55/429 (12%)

Query: 17  LKRMTLLSIIG--IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           L+   LL +I   +IGL+ W+ L  I+      G+++    V  I+S   G++ +  V  
Sbjct: 57  LRARALLYVIALIVIGLVVWASLAKIDEVTRGQGKVIPSRQVQVIQSQDGGVVTEILVRE 116

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD-VLEKAFES 133
           G  + +G  L++ +   +       +   + L   I    + +D    + D  L +A   
Sbjct: 117 GDLVTKGQLLVSLDQTRSQSSFRENRAEYQALAVKIARLTAVVDKTEFRPDPSLIEAVPG 176

Query: 134 --REEQLLDFLGKYHSTCSKV-FNYGISS---VYRSLKMKLTRMRSIYLNRLDLENKSSL 187
              +EQ L     Y S+ +++ F   I+    V R  ++   + R         E +++ 
Sbjct: 177 IVNQEQAL-----YESSQAELGFEKRIAQEQLVQREQELIEVKAR---------ERQAA- 221

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            R+L  + Q +L + K +    AVS+ ++ + ER V + + E ++   +   +   I E 
Sbjct: 222 -RSLQLTEQ-ELGLTKPMVVSGAVSEVEILRLEREVNQLSGERKQAAAQIDRIESSIQEA 279

Query: 248 YDEAN---LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR-------EQKTILSPIA 297
             + +   LEF N ++E            AD ++++  L ++        +Q  + SP+ 
Sbjct: 280 KSKVSGVELEFVNEVRE----------EMADTITRMNALRESGLGLSDRVKQTEVRSPVN 329

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+     ++        + ++++VP      +  ++ PK I  +  G  A V+F  Y  
Sbjct: 330 GTVKQLYYYTIGGVVLAGKEIIEVVPADDTLLLEVRIRPKDIAFLVPGQKALVKFTAYDF 389

Query: 358 IREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-L 414
           +       I+E I  D ++ ++ N      +YEV+++  ++  +++   +  G   EV +
Sbjct: 390 VVYGGLDGIVEHIGADTVMDEEGNP-----FYEVLVRTDEVGIAEDK-PIIPGMTVEVDI 443

Query: 415 FTAKNTTLA 423
            T K T LA
Sbjct: 444 LTGKKTVLA 452


>gi|254512850|ref|ZP_05124916.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
 gi|221532849|gb|EEE35844.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
          Length = 435

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 86/376 (22%), Positives = 163/376 (43%), Gaps = 58/376 (15%)

Query: 10  KRNHPA-SLKRMTLLSIIG----IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           K + PA S+K    + I+     ++GL  WS+   +  ++ S G I  + N   I+ P  
Sbjct: 4   KSSGPAWSIKAPAFVGILALAILVLGLGVWSVRTELAGAIISQGVIEVQSNRQVIEHPDG 63

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDI----ETTDLIDLKKVSIKNLRCHIDTEK---SAL 117
           G++ +  V +G  + +G  +L  +D     E T ++D +   +   +  ++ E+   SA 
Sbjct: 64  GVVGEIFVRDGDAVARGDLMLRLDDTFLASEKT-IVDSQLFELLARKTRLEAERDGASAE 122

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
               N  D      +SRE    D L        ++FN  + ++ + +  +L + +    N
Sbjct: 123 TLAQNLQD-----LKSREPIGDDLLAGQQ----RLFNARLETLTQQID-QLGKQKVQIGN 172

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++E   + L AL  + Q DL +   L ++  + +  L Q  R+   S L+      E+
Sbjct: 173 --EIEGTQAQLAAL--NIQVDL-IRTELTDQQGLLERGLTQASRV---SALQ-----REE 219

Query: 238 KNMLRHINELYDEANLEFANYLKEISR------DLEQNQRTFA-----DEMSKLTILEKT 286
            N+   I  L  E+ +  A    +IS       +L+  +R  A     D  S++  L + 
Sbjct: 220 ANLTGQIGRL--ESTI--ARLTGQISTTEIQIVELQATRREEAITQLRDVQSRVVELAER 275

Query: 287 REQKT-------ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           R   T       I +P+AGT+  +Q F+  +  Q  +P+M +VP      + A+V    +
Sbjct: 276 RLSLTERLSRLDIRAPVAGTVYDSQVFAIQSVIQPGEPMMYVVPQDTPLLVAARVDALHV 335

Query: 340 QHVKKGYTATVRFPHY 355
             + +G    +RFP +
Sbjct: 336 DQLHRGQGVALRFPAF 351


>gi|220922509|ref|YP_002497811.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium nodulans ORS 2060]
 gi|219947116|gb|ACL57508.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium nodulans ORS 2060]
          Length = 446

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 81/445 (18%), Positives = 186/445 (41%), Gaps = 36/445 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +++R+  ASL    LLS+  + G+  W+    I  +V + G+++ E +V +++ P  G++
Sbjct: 21  SIRRHLQASL----LLSVALVGGVGGWAAFTQISGAVIAPGQMVVESDVKKVQHPTGGVV 76

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKY 124
            + +V +G ++  G  L+  ++ +T   +D+   ++  L   R   + E+     +    
Sbjct: 77  GELRVRDGDRVKAGDVLIRLDETQTRANLDIVLKALDELAARRARDEAERDGASAITFPA 136

Query: 125 DVLEKAFESREEQLLDFL--GKYHSTCSKV-FNYGISSVYR----SLKMKLTRM-RSIYL 176
           D+L++A   R +  +  L  G+     S+V    G  +  R     LK ++T + +    
Sbjct: 137 DLLQRA---RTDATVAHLIEGETRLFTSRVNAREGQKAQLRERLAQLKQEITGLTQQAGA 193

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNL--FEKNAVSQNDLNQQERIVYKSTLELRENI 234
              ++   +S L+ +   + K+L  +  L   E++AV    L  +   +  ST   R  +
Sbjct: 194 KEREIAFIASELKGVRELYAKNLVQLPRLTALERDAVR---LEGERGQLIASTASARGKL 250

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E +  +  I++          +   E+ +DL + +  +++ + K    E   ++  + +
Sbjct: 251 SEIELQILQIDQ----------DMRTEVGKDLAEIRGKWSELVEKRVAAEDLLKRVELRA 300

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P  G +      +       ++P M IVP +    +  K+ P+ I +V+      +RF  
Sbjct: 301 PQDGIVHQMTVHTIGGLVTPNEPAMLIVPSADQLAVEVKIQPQDIDNVRLDQPVVLRFAA 360

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEV 413
           +      +   ++ ++   +S          YY   + + +   +   N+ L  G P E 
Sbjct: 361 FNQRTTPEIDGVVTRVSADVSTDPKT--GASYYTARISVPEEQKARLGNVRLVPGMPVES 418

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIF 438
                  ++   +  P+ D   K +
Sbjct: 419 FMQLGQRSVLSYLTKPLADQVAKAW 443


>gi|288960000|ref|YP_003450340.1| protein secretion protein [Azospirillum sp. B510]
 gi|288912308|dbj|BAI73796.1| protein secretion protein [Azospirillum sp. B510]
          Length = 476

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 86/438 (19%), Positives = 174/438 (39%), Gaps = 54/438 (12%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           +G  G+  W+ + P+  ++S+SG +  E     IK+   G+I    V+ G ++  G  L+
Sbjct: 65  VGFGGMTGWAAVAPLHSAISASGSLAPETGRKVIKNTEGGVISAILVKEGDRVDAGQVLM 124

Query: 86  TFEDIETTDLIDLKKVSI-----KNLRCHIDT-EKSALDF-------------LNNKYDV 126
             +  E    +++   ++        R   +  EK A+++             + N    
Sbjct: 125 RLDSTEAQTRLEMLNAALFDTLASEARLSAELFEKPAIEWPAELAARRAREPAVENAMTN 184

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            EK F+ R  Q LD   K   T  ++   G   V+   K +    R I L+  D++    
Sbjct: 185 QEKLFQVRRNQ-LDTEAKL--TQDRIATLG-DEVHSLEKQRAFLAREIKLSDEDIQITQG 240

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           LL    S+  K +   K   + +A       Q   +  + +   ++ +  Q +++R  ++
Sbjct: 241 LLDRGNSTRTKLVAAQKENAQLHA-------QDHELEARMSQSRQQAVDAQGDLVRRRSD 293

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++  +E      +  +  EQ      D  ++L       + +TI +P  G +V     
Sbjct: 294 FREKVLVELDKARGDAQKLAEQ----IRDARNRL-------DNRTIRAPDTGDVVMYGHP 342

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       ++P++ IVP  K      ++ PK I+ +       V+   Y D R      +
Sbjct: 343 TVGGTITANEPVLDIVPDDKALLAEVRIQPKDIKSMAVDLPVKVQLTAY-DSR------V 395

Query: 367 IEKIDPIIS-----QQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
           +  ID  +S     +  +N   Q+YY   +++ D    +  N++++ G P E        
Sbjct: 396 VGTIDGTVSYVSADRLTDNATRQDYYLARIRLKDADSHEVRNLKIKAGMPVEARIVLSAR 455

Query: 421 TLAQEIIHPITDNWPKIF 438
           T    +I P+  ++ K F
Sbjct: 456 TPLDYLIQPLRQSYVKAF 473


>gi|15889959|ref|NP_355640.1| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
 gi|15157919|gb|AAK88425.1| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
          Length = 437

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 88/417 (21%), Positives = 170/417 (40%), Gaps = 29/417 (6%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    +  +V ++G ++ E N  +I+    GI+ +  V  G ++  G  LL      + 
Sbjct: 35  WAAFAKLAGAVVATGRVVVEGNSKKIQHLSGGIVSEINVVEGDRVAAGQILLRL----SA 90

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTCSKV 152
            ++      I+N    + + ++ L     + ++ E+ +F   E    D      S  +K 
Sbjct: 91  TVVQANLSIIENTLAQLYSRRARL-----RAEIAEEPSFTVTE----DLTALTSSKSAKT 141

Query: 153 FNYGISSVYRSLKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKN------- 204
           F     +++ S +  L  M+  +   +L L +++  L   + + + +L ++K        
Sbjct: 142 FIDSEQNLFNSRRNALIGMKKQLATRKLQLADEARGLDVQVEATENELAIVKEDVSKTDE 201

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELREN--IHEQKNMLRHINELYDEANLEFANYLKEI 262
           L +K  V+   LN  +R +  S LE ++   I  +   +  ++EL  +      +   E+
Sbjct: 202 LLKKGLVTLQRLNLLKRQL--SNLEGQQGQYIAARAQTVGKLSELDLQLLQLDEDRKSEV 259

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           ++DL   + T A+   +L       ++  I SPIAG I      + +   Q  + LM +V
Sbjct: 260 TKDLTSIEATVAEYEERLAATRDQLDRLDIRSPIAGRIYQLSVHNINGVIQPGEVLMLVV 319

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P      I A +TP+ I  +  G   TVRF  +         A +  + P + Q D+   
Sbjct: 320 PDKDDLAIEANITPRDIDQIYVGQPVTVRFTAFNQSTTPDLSAEVAVVAPDL-QTDSRTG 378

Query: 383 TQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           T  YY + ++            +L  G PAEV       ++    + P  D   K F
Sbjct: 379 T-SYYVLRIRPNKAGMGHLPGGKLYPGMPAEVFIQTSERSVLSYFVKPFQDRLKKTF 434


>gi|320530948|ref|ZP_08031981.1| type I secretion membrane fusion protein, HlyD family [Selenomonas
           artemidis F0399]
 gi|320136813|gb|EFW28762.1| type I secretion membrane fusion protein, HlyD family [Selenomonas
           artemidis F0399]
          Length = 491

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 75/350 (21%), Positives = 151/350 (43%), Gaps = 25/350 (7%)

Query: 14  PASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P    R+ + +I  ++  I  W+I   ++    ++G+I+ +  V  +++   GI++   V
Sbjct: 74  PTYAGRIAVWTIAALMAAILLWAIFGTVDEVAVTTGKIIPDGYVRTLQAYDKGIVRTIYV 133

Query: 73  ENGSQILQGTPLLTFED-IETTDLIDLKK-VSIKNLRC-HIDTEKSALDFL--NNKYDVL 127
             G ++ +G  L+  +  I   DL  ++K  +   LR   +  EK+   F    N  D+ 
Sbjct: 134 TEGQKVSKGDVLMELDPTISEADLAKVRKQAAYARLRLERLQAEKNGGAFHPDRNSTDLD 193

Query: 128 EKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           EK   S +         YH+    ++       +  RS K+ L ++RS+Y    D EN+ 
Sbjct: 194 EKEISSEQALFASREADYHTRLYAAQQEAAKAEAELRSSKIDLDKLRSLYAIEADKENRY 253

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           + L  +  +   +++++     + AV ++  N+QE  V  ++  L + I           
Sbjct: 254 AAL--VDEAAIAEISLIDQRGRRIAVEES-ANEQEETVSGNSAALSKAI----------- 299

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
             +D AN++    L  I ++++Q Q+       +L    +  E   IL+P  G +   Q 
Sbjct: 300 --WDLANVKAERQLS-IDQEIDQTQQELFQANEELKKAAEQHELIKILAPDDGYVSNLQV 356

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +  +    +Q LM++VP      I      K I  +++G  A V+   +
Sbjct: 357 HTLGSVVTTAQALMELVPEGTRLEIETWAQNKDIGFLQEGQEADVKIESF 406


>gi|126176193|ref|YP_001052342.1| HlyD family type I secretion membrane fusion protein [Shewanella
           baltica OS155]
 gi|153002487|ref|YP_001368168.1| HlyD family type I secretion membrane fusion protein [Shewanella
           baltica OS185]
 gi|160877204|ref|YP_001556520.1| HlyD family type I secretion membrane fusion protein [Shewanella
           baltica OS195]
 gi|217975054|ref|YP_002359805.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS223]
 gi|304412241|ref|ZP_07393850.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS183]
 gi|307306985|ref|ZP_07586725.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica BA175]
 gi|125999398|gb|ABN63473.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS155]
 gi|151367105|gb|ABS10105.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS185]
 gi|160862726|gb|ABX51260.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS195]
 gi|217500189|gb|ACK48382.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS223]
 gi|304349507|gb|EFM13916.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS183]
 gi|306910563|gb|EFN40993.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica BA175]
 gi|315269408|gb|ADT96261.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS678]
          Length = 460

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 79/404 (19%), Positives = 167/404 (41%), Gaps = 53/404 (13%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++  + W+    ++   + +G+++    V  I+S   GI+++  V+ G  + +G PL+  
Sbjct: 39  VVCFLLWAGFAKLDKVTTGTGKVIPSSQVQVIQSLDGGIMQELYVQEGEMVTKGQPLVRI 98

Query: 88  EDI--------ETTDLIDLKKVSIKNLRCHIDT----------------EKSALDFLNNK 123
           +D         +  ++  LK  +I+ +R  +D+                 K AL F  N 
Sbjct: 99  DDTRFRSDYAQQEQEVFGLKTNAIR-MRAELDSILISDMTSDWREQVLITKKALVFPENI 157

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               E A   R+++               +N  + ++   L++ + +++       DL +
Sbjct: 158 I-AAEPALVKRQQE--------------EYNGRLDNLSNQLEILVRQIQQRQQEIDDLAS 202

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K++ L   +    ++L + + L +K  V + +L + ER V     +L+  ++  + +   
Sbjct: 203 KTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLERTVN----DLQGELNSMRLLRPK 258

Query: 244 INELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAG 298
           +    DEA L+       Y  ++   L + Q T    M++  +  + +  K I+ SP+ G
Sbjct: 259 VKAAMDEAILKRREAVFVYAADLRAQLNETQ-TRLSRMNEAQVGAQDKVSKAIITSPVNG 317

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           TI      +     Q    +++IVP      I  K+ PK I  +  G  A V+   Y   
Sbjct: 318 TIKTTHINTLGGVVQPGVDIIEIVPSEDQLLIETKILPKDIAFLHPGLPAVVKITAYDFT 377

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           R    K  +E I    SQ +   +   YY + ++  + + + N+
Sbjct: 378 RYGGLKGTVEHISADTSQDE---EGNSYYLIRVRTAESSLTKND 418


>gi|149377645|ref|ZP_01895382.1| Type I secretion membrane fusion protein, HlyD [Marinobacter
           algicola DG893]
 gi|149358057|gb|EDM46542.1| Type I secretion membrane fusion protein, HlyD [Marinobacter
           algicola DG893]
          Length = 388

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 93/435 (21%), Positives = 175/435 (40%), Gaps = 73/435 (16%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K+L R++ AS   +   S++ I   I WS    ++      G+++    +  I+S   GI
Sbjct: 10  KSLSRHYRAS-HPILWFSLLVIAVFIGWSAWAEVDEVTRGEGQVVPLSRMQTIQSLDGGI 68

Query: 67  IKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           + +  V  G ++ +G  L+  +D       +E    I + + SI  L+  +  EKS +DF
Sbjct: 69  LAELLVRRGDRVERGQLLVRLDDTQFRSAYLEIASQIAVLRASIARLKAEV-LEKSEIDF 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                            + LD  G+   +   +F       +   +      RSI     
Sbjct: 128 ----------------PETLDPEGELVQSERALF-------HARRERMREAERSI----- 159

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
              NK       +S  ++ L +++ L E+ +VS+ +           +L+L + I     
Sbjct: 160 ---NKE------MSLARRQLDLVEPLVERRSVSEME-----------SLKLGQTIASLAG 199

Query: 240 MLRHINELY-DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            L  +   Y  +A  E +    E+S  LEQ      D++          E+  I SP+ G
Sbjct: 200 RLAELRNTYVQDAYTELSAKQAEVS-SLEQKLMQRRDKL----------ERTNIYSPVRG 248

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +      +     +  +P+M+I P      I AKV P+ +  V  G  A+V+   Y   
Sbjct: 249 RVNDILINTEGGVIRPGEPIMEITPIEGQLLIEAKVRPQDVAFVAPGMPASVKITAYDYT 308

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLF 415
                +  +E+I     +++     + +YEV+++ T+ A+ + N   + +R G  A+V  
Sbjct: 309 IYGDLQGEVEQISEDTIEEETPRGKEAFYEVLIR-TEKAYLERNGTTLPIRPGMVAQVDI 367

Query: 416 TAKNTTLAQEIIHPI 430
                TL   ++ PI
Sbjct: 368 QTGKRTLLSYLLKPI 382


>gi|123440527|ref|YP_001004521.1| HlyD family secretion protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087488|emb|CAL10269.1| HlyD family secretion protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 410

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 90/433 (20%), Positives = 173/433 (39%), Gaps = 51/433 (11%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           G IG + W+ L P++  ++  G I+  +N   ++    G I++  V  G  + QG  L+T
Sbjct: 5   GFIGSLLWAGLAPLDKGIAVMGHIVVAENRKLVQPLQGGRIQQLHVAEGDDVTQGQLLIT 64

Query: 87  FED---IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE---KAFESR----EE 136
            +D   +   D +  + +S       +  E+  L  +     +L+   +A   R    ++
Sbjct: 65  LDDTALLSHRDNLQNQYLSALAQESRLTAEQHELPTITFPPALLQHPAQALVERNTVLQQ 124

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSH 195
           QL  FL +  +  S +           L  ++TR  S    RLD L+      +      
Sbjct: 125 QL--FLHRRQAQLSDIAR---------LSAQITRHES----RLDGLQVARGHNQRQFDLF 169

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERI-------VYKST---LELRENIHEQKNMLRHIN 245
           Q+ L  ++ L +   V+Q+ L + ER        + K+T   LEL + I E +  +    
Sbjct: 170 QRQLQGVQLLAKNGHVAQSQLLEMERQAISLRANIEKNTSEILELHKQIGETEQHILQRR 229

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E Y   N E     ++ +++LEQ          +L I E   +   I +P++GT++    
Sbjct: 230 EQYKSENREQLAKAQQSTQELEQ----------RLGIAEYELDNTRIYAPVSGTVIALTQ 279

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +        Q LM++VP+ +     A++    I  V  G    + F  +      + + 
Sbjct: 280 HTVGGVVSTGQTLMELVPNGQPLLAEAQLPVSLIDKVMVGLPVDLNFSAFNQSSTPRLQG 339

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            +  +     Q  + L+   YY + + I     +   +E+R G   ++       +L   
Sbjct: 340 SVLHVGADRIQNSHTLEP--YYPLTVAID---ITQTELEIRPGMSVDIFIRTGERSLLNY 394

Query: 426 IIHPITDNWPKIF 438
           +  P+TD     F
Sbjct: 395 LFKPLTDRLHVAF 407


>gi|221066205|ref|ZP_03542310.1| type I secretion membrane fusion protein, HlyD family [Comamonas
           testosteroni KF-1]
 gi|220711228|gb|EED66596.1| type I secretion membrane fusion protein, HlyD family [Comamonas
           testosteroni KF-1]
          Length = 470

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 85/413 (20%), Positives = 167/413 (40%), Gaps = 45/413 (10%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ L  I+  V   G+++    V  ++S   GI+K+  V  G  + QG  +L  +    +
Sbjct: 76  WACLGRIDEVVRGQGKVVPSRQVQVVQSLDGGIVKEILVHPGEHVEQGQVILRIDPTRYS 135

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE------QLLDFLGKYHS 147
             +   K  +  L+     + + L  L +      + F++ E+      QL++   +   
Sbjct: 136 SSLGENKAELLALKA----KAARLQALASG-----EPFKAPEDVQALAPQLVEMERRMWE 186

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + S+  N  ++     L+ +   +R    NR    +  SL         ++L++ + L +
Sbjct: 187 SRSQELNTNVNIARDQLRQRQQELRETQANRDQASSSCSLT-------SEELSVTRPLLK 239

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL---YDEANLEFANYLKEISR 264
             AVS+ DL + +R V +   E +    +   +   I E      E+ L   N       
Sbjct: 240 SGAVSEVDLLRLQRDVARFCGEAKAAGAQIGRIQAAIQEAERKIQESELNMRN------- 292

Query: 265 DLEQNQRTFADEMSKLTILEKTR---EQKTIL----SPIAGTIVYNQSFSSSNYAQQSQP 317
              Q++   +D  +KL  LE+ +   E +  L    SP+ GT+    + +     Q  + 
Sbjct: 293 ---QSRSDLSDTQAKLGTLEQGKVALEDRVKLAEVRSPVRGTVNTLMANTVGGVVQPGKD 349

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++ IVP      +  +V P+ I  +  G  A V+F  Y D     +  +  K++ I +  
Sbjct: 350 ILDIVPLDDTLLMEVQVNPRDIGFLHFGQQAEVKFTAY-DF--AIYGGLQGKLEQIGANT 406

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             + +   +Y V ++       D++  +  G  AEV       TL Q ++ PI
Sbjct: 407 VTDEKGNSFYVVKVRTDKAHVGDDSRPIIPGMQAEVHILTGKRTLMQYLLKPI 459


>gi|104780727|ref|YP_607225.1| alkaline protease (AprA) secretion protein AprE [Pseudomonas
           entomophila L48]
 gi|95109714|emb|CAK14415.1| alkaline protease (aprA) secretion protein aprE [Pseudomonas
           entomophila L48]
          Length = 430

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 77/433 (17%), Positives = 159/433 (36%), Gaps = 50/433 (11%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L+++G  G + W+ L P++  V   G ++       ++S   G++ +  V  G Q+ QG
Sbjct: 17  VLTLVGFGGFMAWASLAPLDQGVPVQGTVVVSGKRKAVQSMAGGVVSRILVSEGQQVRQG 76

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKA-------- 130
            PL   +  +    +D  +   +  R  +    +E+  L  +    D++E A        
Sbjct: 77  EPLFRLDRTQVQADVDALQAQYRMTRASLARWQSERDNLAQVQFPTDLVEDADAKLGLIL 136

Query: 131 ------FESREEQLLDFLGKYHST--CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                 F+SR +      G   ++   S+    G+      L+ +   +R    N   L 
Sbjct: 137 EGQRQLFDSRRQAQAREQGALSASIDGSQAQLAGMRRARSDLQAQADSLREQLDNLRPLA 196

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
               + R  +  +Q+ L+ ++    +NA     L   E+++ +S L L++   E      
Sbjct: 197 GDGYIPRNRVLEYQRQLSQVQRDLAQNAGESARL---EQVIVESRLNLQQRREE------ 247

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                          Y KE+   L + Q   A    +L       +   I +P  G  V 
Sbjct: 248 ---------------YQKEVRTQLAEAQVKAATLEQQLNSARFELQHSEIQAPADGIAVN 292

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +     +    L++IVP      +  ++    +  V       + F  +   R  +
Sbjct: 293 LGVHTEGAVVRPGDTLLEIVPQGTALEVEGRLPVNLVDKVAPQLPVDILFTAFNQNRTPR 352

Query: 363 FKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKN 419
               +  +  D +I ++      Q YY +   +++ A +    + +R G PAE+      
Sbjct: 353 VTGEVALVSADQLIDERSG----QPYYVLRSTVSEEALARLQGLAIRPGMPAELFVRTGE 408

Query: 420 TTLAQEIIHPITD 432
            +L   +  P+ D
Sbjct: 409 RSLLNYLFKPLLD 421


>gi|163739525|ref|ZP_02146935.1| Type I secretion membrane fusion protein, HlyD [Phaeobacter
           gallaeciensis BS107]
 gi|161387278|gb|EDQ11637.1| Type I secretion membrane fusion protein, HlyD [Phaeobacter
           gallaeciensis BS107]
          Length = 389

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 78/422 (18%), Positives = 161/422 (38%), Gaps = 53/422 (12%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R       R+  L    ++  + W+    ++  V + GE+++      +++   GI+ + 
Sbjct: 9   RETSRGASRIIYLVAGALVVFLLWASFAWVDEIVRADGEVVSSSRSQIVQNLEGGILAEL 68

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G  +  G  L   +D +               R   D  +  +D L  K   LE  
Sbjct: 69  HVHQGDVVKAGQILARLQDTK--------------FRAAADDLQDRIDALEIKQYRLEAE 114

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            E          G +     +        +Y S +  L   ++ + +R D        R 
Sbjct: 115 LE----------GAFDFNVPEELADRSPGIYTSERALLNARQTDFTSRRDS------ARE 158

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
           +L   + +L  MK L +K  V+  ++N+ ++ V  +  +  E I  Q  +   + E Y +
Sbjct: 159 ILDQLKDELANMKRLHKKEIVALIEVNRSQKSVSDAQAKYNE-IGTQSEL--ELAEDYSK 215

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              E  +Y +E+    +Q  RT                   I SP+AG +      +   
Sbjct: 216 TLRELTSYRQELRLAQDQLNRT------------------VITSPMAGIVNSLAVTTIGG 257

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  + +++I+P  +  ++ A+V P+ I  V+ G  AT++   Y        +  ++ +
Sbjct: 258 VIRPGEEIVEIIPLGEEMFVEARVKPENIASVQPGQDATIKLSAYDYTIYGSLRGKVDFV 317

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIH 428
                + + N + + YY V +K+    F++    IE+R G  A       + T+   ++ 
Sbjct: 318 SADTFEDERNPRAEPYYRVTVKVDRSEFTERQQAIEIRPGMRATAELQTGSKTILNYMLK 377

Query: 429 PI 430
           P+
Sbjct: 378 PL 379


>gi|167648123|ref|YP_001685786.1| HlyD family type I secretion membrane fusion protein [Caulobacter
           sp. K31]
 gi|167350553|gb|ABZ73288.1| type I secretion membrane fusion protein, HlyD family [Caulobacter
           sp. K31]
          Length = 469

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 69/368 (18%), Positives = 152/368 (41%), Gaps = 29/368 (7%)

Query: 14  PASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P  L R+ L +++  I + + WSIL  +++  ++ G+++   NV  I++   G+++   V
Sbjct: 50  PNPLGRIILWAMLAFIAIALAWSILGKVDMVAAAPGKVIPRGNVKLIQAADYGVVRALHV 109

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA--LDFLNNKYDVLEKA 130
             G  +  G PL+  +   T    D+ +     L   ID  ++   +D+   +      A
Sbjct: 110 VEGQSVRAGQPLVDLDPTATG--ADVAQARQALLSADIDAARATALVDYAGGR----STA 163

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD----LENKSS 186
           F +      D   +      + F   + +  R     L  ++     R      +E++  
Sbjct: 164 FRA-----PDGADRASVATQRAF---VDAKRREQAATLQGLQQDRRQRQGELGMIESEMV 215

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRH 243
            L   +   ++ L  M++L  K    +  +++ E+ +     +L   R+   + +  +  
Sbjct: 216 KLAQQIPLAEERLAGMRSLASKGYAPRMKVSELEQTIVGMRQDLAIRRDERSKAQAAVAG 275

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVY 302
           +++   +A  EF+  + +   + + N+R   +E++K +     +   T+L +P  G I  
Sbjct: 276 VDQQIAKARGEFSREVLDALTEAQANRRLRGEELTKAS----DKAGLTVLTAPQDGVIQQ 331

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            Q  +     + + PLM +VP      I A+V  +    V +G +  ++   Y   R   
Sbjct: 332 MQVHTLGGVVKPADPLMVLVPKGGELIIEARVQNRDAGFVHEGQSVEIKLEAYPFTRYGV 391

Query: 363 FKAIIEKI 370
              +IE I
Sbjct: 392 VHGVIEHI 399


>gi|92118502|ref|YP_578231.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
 gi|91801396|gb|ABE63771.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
          Length = 437

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 89/437 (20%), Positives = 178/437 (40%), Gaps = 39/437 (8%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           T L ++   G+  W+    +  +V + G ++ + +V +++ P  G+I + +V +G  +  
Sbjct: 20  TFLVLLVTFGIGGWAATTELSSAVVAPGVLVVDSSVKKVQHPTGGVIGELRVRDGDHVRA 79

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESR--- 134
           G  L+  ++ +T     +   S+  L   +  ++TE+  +  L     +L++A +     
Sbjct: 80  GDILVRLDETQTRAAATIITKSVDELLARQARLETERDNIPELAFPAALLDRAHDPASDA 139

Query: 135 ------EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                 E  L D          +    G  S  +    +L      Y  +++ + K    
Sbjct: 140 ARAVAAERSLFDL--------RRQAREGQKSQLKERSAQLQDEIKGYQGQVEAKKKE--- 188

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHIN 245
              +   Q++L  ++ LF+KN V  + L   ER   +   E   L   I + K       
Sbjct: 189 ---VDFIQQELEGVRTLFQKNLVPISRLTALERDSARIEGERSQLSGMIAQAKG---KTA 242

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQ 304
           E+  +      +   E+ +DL +  R+   EM++  I    + Q+  I +P  G +VY  
Sbjct: 243 EIQLQIIQIDQDLRSEVGKDLVEV-RSKISEMAERKIAAVDQLQRIDIRAPQDG-VVYQL 300

Query: 305 SFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           S  +        + +M IVP +    +  K+ P+ I HV  G  A +RF  +      + 
Sbjct: 301 SVHTVGGVIAPGEQIMLIVPDADTLAVEVKIAPQDIDHVHVGQLAILRFSAFNQHTTPEI 360

Query: 364 KAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
              +  I P ++ QD    T  Y   + LK  +L     +++L  G PA+      + T+
Sbjct: 361 TGAVSVISPDLT-QDQRTGTSFYTTRIALKPEELERL-GSVKLIPGMPADAFIQMGDRTV 418

Query: 423 AQEIIHPITDNWPKIFE 439
              ++ P+ D   + F+
Sbjct: 419 LSYLMKPLRDQAARAFK 435


>gi|254515318|ref|ZP_05127379.1| HlyD family secretion protein [gamma proteobacterium NOR5-3]
 gi|219677561|gb|EED33926.1| HlyD family secretion protein [gamma proteobacterium NOR5-3]
          Length = 447

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 79/413 (19%), Positives = 172/413 (41%), Gaps = 47/413 (11%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++ LI W+    ++      G+++    V  + S   G+I++  +  G  +  G  LL  
Sbjct: 48  VVLLIVWATFAEVDTVTRGQGKVIPSQQVQVVGSQDGGVIREILIREGDTVKAGDLLLRL 107

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +   +   +   +V ++ L       ++ +D  N ++        +   Q+L  L     
Sbjct: 108 DQTRSQATLGENRVELQGLTIKAARLRAMVD--NAEF--------APTPQMLTALPDVAD 157

Query: 148 TCSKVFNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
              ++    +++  V + +  +    RS  L+  +L+ + S L       Q++LT+ + +
Sbjct: 158 QERELHESSVTALRVEQDIARQQLEQRSEELS--ELKARESQLATEQRLAQQELTVTEPM 215

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEI 262
               AVSQ ++ + +R V ++  EL +   + K +   I E     N   LEF+N  +E 
Sbjct: 216 VASGAVSQVEILRLQREVNRAGGELAQTQAQIKRVSAAIAEAQGRVNAVQLEFSNEARE- 274

Query: 263 SRDLEQNQRTFADEMSKLTILEKTR-------EQKTILSPIAGTIVYNQSF--SSSNYAQ 313
                       D ++++  L +          Q  + +P++GTI  NQ +  +      
Sbjct: 275 ---------QLTDTLTRINALTEAAAGLSDRVSQTNLTAPVSGTI--NQLYFNTVGGVVL 323

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--D 371
             + +++++P      +  +V P+ I  +  G  A V+   Y  +     +  +E+I  D
Sbjct: 324 PGRDIVELIPADDTLLLEVRVRPQDIAFIAAGQRANVKVTAYDFVVYGGLEGRVEQIAAD 383

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLA 423
            ++ ++ N      +YEV+++     F  ++  +  G   EV + T K T LA
Sbjct: 384 TVLDEEGNA-----FYEVLVRTEQSDFGPDS-PIIPGMTVEVDVITGKKTVLA 430


>gi|16125261|ref|NP_419825.1| RsaA secretion system, membrane protein RsaE [Caulobacter
           crescentus CB15]
 gi|221233998|ref|YP_002516434.1| type I secretion adaptor protein RsaE [Caulobacter crescentus
           NA1000]
 gi|6064108|gb|AAC38667.2| membrane forming unit [Caulobacter crescentus CB15]
 gi|13422299|gb|AAK22993.1| RsaA secretion system, membrane protein RsaE [Caulobacter
           crescentus CB15]
 gi|220963170|gb|ACL94526.1| type I secretion adaptor protein RsaE [Caulobacter crescentus
           NA1000]
          Length = 436

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 82/440 (18%), Positives = 163/440 (37%), Gaps = 75/440 (17%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           +GL+ W+   P++ +V ++G +  E N   ++    G++ K  V  G ++  G  L   +
Sbjct: 29  VGLLGWAAFAPLDSAVIANGVVSAEGNRKTVQHLEGGMLAKILVREGEKVKAGQVLFELD 88

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             +                       +A     N+Y  L KA E+R       L +    
Sbjct: 89  PTQAN---------------------AAAGITRNQYVAL-KAMEAR------LLAERDQR 120

Query: 149 CSKVFNYGISS------VYRSL---KMKLTRMRSIYLNRLDLENKSSL------------ 187
            S  F   ++S      V R++   + + T  R     ++DL N   L            
Sbjct: 121 PSISFPADLTSQRADPMVARAIADEQAQFTERRQTIQGQVDLMNAQRLQYQSEIEGIDRQ 180

Query: 188 ---LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER-------IVYKSTLELRENIHEQ 237
              L+  L   + +L  ++ L++K  V +  L   ER        + + T +  + +   
Sbjct: 181 TQGLKDQLGFIEDELIDLRKLYDKGLVPRPRLLALEREQASLSGSIGRLTADRSKAVQGA 240

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +    + ++  E       + +++S+ + + +   A+   K  +    +++  I+SP+ 
Sbjct: 241 SDTQLKVRQIKQE-------FFEQVSQSITETRVRLAEVTEKEVVASDAQKRIKIVSPVN 293

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT    + F+     + ++PL+ I P  +   I+A   P  + +V  G    VR P +  
Sbjct: 294 GTAQNLRFFTEGAVVRAAEPLVDIAPEDEAFVIQAHFQPTDVDNVHMGMVTEVRLPAFHS 353

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN----GFPAEV 413
                    I+ +      QD     Q   +  L I  +        LR     G PA+V
Sbjct: 354 REIPILNGTIQSLS-----QDRISDPQNKLDYFLGIVRVDVKQLPPHLRGRVTAGMPAQV 408

Query: 414 LFTAKNTTLAQEIIHPITDN 433
           +      T+ Q +  P+ D 
Sbjct: 409 IVPTGERTVLQYLFSPLRDT 428


>gi|91976042|ref|YP_568701.1| Type I secretion membrane fusion protein, HlyD [Rhodopseudomonas
           palustris BisB5]
 gi|91682498|gb|ABE38800.1| Type I secretion membrane fusion protein, HlyD [Rhodopseudomonas
           palustris BisB5]
          Length = 451

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 3/183 (1%)

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           N   E  R+L       A+   +   +E    +  I +PIAG +     F+       + 
Sbjct: 268 NASTEAQRELRTVDARIAELSERRVAIEDRLARTDIKAPIAGYVNELFVFTVGGVITPAA 327

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +  IVP +       K+ P  I  V++G  A VR   ++     + +A + ++ P  ++
Sbjct: 328 RIATIVPDNAALRFEVKIAPVDIDQVREGQPARVRLSAFSRATTPELQARVAQVSPAPAR 387

Query: 377 QDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             +    QE Y   +++TD A +  + + L  G PAEV  + +  T A  ++ P++D + 
Sbjct: 388 --DPATGQESYIAYVQLTDEAAALIHGLRLVPGMPAEVFISTQERTAASYLLKPMSDQFN 445

Query: 436 KIF 438
           + F
Sbjct: 446 RAF 448



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 1/81 (1%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R  P  L  ++L++++ +IG   WS L  +E +V +SG +  + N+ E++    GI+K  
Sbjct: 29  RLWPRVLGGVSLVALL-VIGCGGWSALAKLEGAVITSGAVKVDQNLKEVQHRDGGIVKML 87

Query: 71  QVENGSQILQGTPLLTFEDIE 91
            V  G  + +G  L T +D++
Sbjct: 88  AVRQGDFVREGQVLATLDDVQ 108


>gi|254417320|ref|ZP_05031063.1| auxiliary transport protein, MFP family [Microcoleus chthonoplastes
           PCC 7420]
 gi|196175858|gb|EDX70879.1| auxiliary transport protein, MFP family [Microcoleus chthonoplastes
           PCC 7420]
          Length = 513

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 47/71 (66%), Gaps = 1/71 (1%)

Query: 19  RMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           RM +++IIG+  L +TW+ L  IE ++ + G++  +  V E+++P  G++K  +VE G +
Sbjct: 53  RMIVVAIIGVTTLSVTWACLAKIEEAIPAQGKLEPKAAVKEVQAPQGGVVKSVEVEEGDR 112

Query: 78  ILQGTPLLTFE 88
           + +G  LLTF+
Sbjct: 113 VEKGDTLLTFD 123


>gi|330958201|gb|EGH58461.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 445

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 83/447 (18%), Positives = 177/447 (39%), Gaps = 33/447 (7%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           +H++    +R     ++   +L + G      W+ L P++  ++  G ++       ++S
Sbjct: 7   NHYVVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQS 66

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIET-TDLIDLK---KVSIKNLRCHIDTEKSAL 117
              G++ K  V  G  + +G PL   +  +   D+  L+   +++  +L     +E+  L
Sbjct: 67  LDGGVVSKILVSEGQLVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASL-ARWQSERDNL 125

Query: 118 DFLNNKYDVLEKA----FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
             +N   +++        + R   +L+ L +  S+  +      S +  S++    +++ 
Sbjct: 126 HEINFPAELIAAGQGQDPDPRLALVLEGLRQLFSSRRQALAREQSGLQASIEGAGLQLKG 185

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +   RLDL+ ++  LR  LS+ Q    + +N F    +  N L + +R + +   +L +N
Sbjct: 186 MRRARLDLQAQADSLRQQLSNLQ---PLAQNGF----IPSNRLLEFQRQLSQVQQDLAQN 238

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------T 286
             E   + + I E       +   Y KE+       +  +AD   K   LE+       +
Sbjct: 239 AGETGRIEQSIIESRLRLQQQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFS 291

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            +   IL+P  G  V     +     +  + L++IVP      +  ++  + I  V    
Sbjct: 292 LQHSAILAPADGIAVNLGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHL 351

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIEL 405
              + F  +   R  +    +  I     Q  +    Q YY +   + D A    N + +
Sbjct: 352 PVDILFTAFNQSRTPRVSGEVSLIS--ADQMQDEKTGQPYYVLRTSVGDAALEKLNGLVI 409

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITD 432
           + G PAE+       +L   +  P+ D
Sbjct: 410 KPGMPAEMFVRTGERSLLNYLFKPLLD 436


>gi|172064772|ref|YP_001812422.1| HlyD family type I secretion membrane fusion protein [Burkholderia
           ambifaria MC40-6]
 gi|171998257|gb|ACB69173.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria MC40-6]
          Length = 475

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 75/360 (20%), Positives = 147/360 (40%), Gaps = 42/360 (11%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPI----EISVSSSGEILNEDNVVEIKSPFSGIIK 68
           HPA    M       I+ L+   +LL +    +I  ++ G+++    V  I+   +G+++
Sbjct: 55  HPAPRWTMRF-----IVALVCTCLLLAVFGRLDIVATAKGKLIPSARVKVIQPAITGVVR 109

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K  V +G ++  G PL+  +  +     D +K     +   + + ++       +   + 
Sbjct: 110 KIHVRDGQRVGAGQPLIELDTTQAA--ADAQKSRSARIDAALASARARALLAAQQTSTMP 167

Query: 129 KAFE---SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN----RLDL 181
              E   +  +QL D         ++ F  G   VYR    KL   R+  +     R+  
Sbjct: 168 HVTEVDGASPQQLAD---------AQHFADG---VYREYSDKLAGARAELIKQEAARMAT 215

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E + + LRA     +++    K+L   N V+++D   +E    ++ LE    +  Q++  
Sbjct: 216 EQQVAKLRATSPLARREANDYKDLAADNYVAKHDYLSKE----QTALEQEHELAAQQSHF 271

Query: 242 RHINELYDEANLEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           R +     E      + + +  R+    L++  + FA      T  E  +   T+ SP+A
Sbjct: 272 RELAAGVVEQRAAIESIMSQFRREQLDALDKASQQFAQSREDETKAETRQRLLTLYSPVA 331

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           GT+      +       +Q LM++VP   +  + A +  K I  V  G  A V+   FP+
Sbjct: 332 GTVQQLAVHTLGGVVTTAQALMEVVPDDAVE-VEANIENKDIGFVNVGQDAVVKIEAFPY 390


>gi|27382082|ref|NP_773611.1| alkaline protease secretion protein [Bradyrhizobium japonicum USDA
           110]
 gi|27355252|dbj|BAC52236.1| aprE [Bradyrhizobium japonicum USDA 110]
          Length = 490

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 6/180 (3%)

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           EI++ L + Q        +L        +  + +P  G I   +  ++        PLM 
Sbjct: 312 EIAQSLREAQNQIFQLRERLLAARDQLSRTEVKAPEDGVITDLRVHTAGGVIGAGAPLMD 371

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQD 378
           +VP      + A++ P+ I  V  G +A V    Y   R  + K  +  I  D ++ ++ 
Sbjct: 372 LVPRQDRLIVTARLRPEDIDVVHPGLSAEVHLVPYNQRRVPRLKGTVVHISADRLLDKRT 431

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           +    Q YY   ++I D   + N+I++  G P +V  T    T+A   + P+ D++   F
Sbjct: 432 D----QPYYATKIRIDDGQIAANDIQIVPGMPVQVFITTGRGTVALYALRPLLDSFRGAF 487



 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 38/68 (55%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL +  ++GL TW+ L P+E +  +SG + +E +   I+    GII+K  V +G  +  G
Sbjct: 76  LLVLCFMLGLGTWASLAPLESAAIASGVLESESSRKTIQHLEGGIIRKILVSDGDIVRSG 135

Query: 82  TPLLTFED 89
             L+  +D
Sbjct: 136 QTLIALDD 143


>gi|312883506|ref|ZP_07743231.1| HlyD family type I secretion membrane fusion protein [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368729|gb|EFP96256.1| HlyD family type I secretion membrane fusion protein [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 440

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 93/429 (21%), Positives = 172/429 (40%), Gaps = 42/429 (9%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           I G+ G + WS+ L I+ +V +SG+I  E     ++ P  GI+K   +  G+ +  G PL
Sbjct: 28  IFGLGGFVLWSVSLKIDGAVVASGQISVEAKQQAVQHPDGGIVKHIYIREGAFVEIGEPL 87

Query: 85  LTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE--KAFESREEQLL 139
           L  +         ++  K+V  +     + +E S  + LN    ++E     E  EE L 
Sbjct: 88  LLLDGASLHTQQTVLKRKRVEARARIERLFSEISGSNELNYSSKLIEMGTGIEGFEEIL- 146

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                  +    +FN   + + ++      R +        L+ + +  +  L   QKDL
Sbjct: 147 -------NNEKMLFNARKTIIDQTKAQSQIRQKRTENVISGLQRQLAATKKQLKLTQKDL 199

Query: 200 TMMKNLFEKNAVSQNDLN--QQERIVYKSTL-ELRENIHEQKNM--------LRHINELY 248
              + L  +   S+  L    +E   Y+S L +L  +I E +N         LR   +  
Sbjct: 200 DAQERLQAQEFASKTQLRILHREAAKYESELGQLEASIAESRNTIADHEIEWLRQKTKFQ 259

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVYNQSFS 307
           ++A  E             Q+ R    E+ +   L   + ++ +L +P++G ++   + +
Sbjct: 260 EDAQSEL------------QDLRVKQAELIENIDLNSIKLKRLVLRAPMSGRVLGLSANT 307

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q    +  IVP S    +  ++ P QI  V  G    +RFP +  +   +    I
Sbjct: 308 IGGVIQAGTEIANIVPSSMPLVVNVRIDPLQIDRVSIGQEVRIRFPSFNAVTTPEVYGKI 367

Query: 368 EKIDP-IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           + I   +IS  D N  T  ++   + + + A  D   +EL  G   +        T A  
Sbjct: 368 KNISADVIS--DPNSGT-SFFTAEITLDEQAKQDLAELELVPGMLVDAFIRTDERTPASF 424

Query: 426 IIHPITDNW 434
           ++ PI + W
Sbjct: 425 LLKPIFEYW 433


>gi|294013473|ref|YP_003546933.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292676803|dbj|BAI98321.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 453

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 102/253 (40%), Gaps = 27/253 (10%)

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE----LYDEANL 253
           +L  ++ + EK  VS+  +   ER         + ++  Q+  LR   +    +  EA L
Sbjct: 206 ELESLRTVAEKGFVSKTRIRALERA--------KADLIGQRGRLRAARDSAANMVGEARL 257

Query: 254 EF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +      N  ++I+ +L   Q    D + K         +  + +P++GT+V     +  
Sbjct: 258 KALEAKQNLEEKIASELRDTQALLGDVLPKWGAARDELARTQVRAPVSGTVVGLGVHTVG 317

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                 Q LM IVP      I A+ +P  +  +  G  A +RF  +     +    I  K
Sbjct: 318 GVIAAGQTLMDIVPGHSAVVIEARFSPTDVDDLAVGQKAEIRFAGFPG---RSLPIIEGK 374

Query: 370 IDPIISQQDNNLQTQEYY---EVILKITDLA----FSDNNIELRNGFPAEVLFTAKNTTL 422
           +  I +      +T   Y   EV +    +A    + + +  ++ G P EV+   +  T 
Sbjct: 375 VTRISADSFVEEKTGIAYFAGEVTIAPDQIALIRRYREGDFAMKPGMPVEVVVPLRRRTA 434

Query: 423 AQEIIHPITDN-W 434
            Q ++ P+TD+ W
Sbjct: 435 LQYMVDPLTDSMW 447


>gi|126725508|ref|ZP_01741350.1| probable alkaline protease secretion protein [Rhodobacterales
           bacterium HTCC2150]
 gi|126704712|gb|EBA03803.1| probable alkaline protease secretion protein [Rhodobacterales
           bacterium HTCC2150]
          Length = 422

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 174/443 (39%), Gaps = 52/443 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L R   A L+   L  II + G   WS L PI  ++  SG +++     +I+ PF G++ 
Sbjct: 4   LPRQIFAPLRMAALAVIIFLGGAGLWSALAPIATTLRISGTLVSTKPSFDIQHPFGGLVT 63

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYD 125
              V     +  G  LL   D ET D       ++K +R    +++ E   +  +++   
Sbjct: 64  DVLVSLHQSVEVGETLLIL-DTETQD------KTLKTIREQIAYLEAENEIITSISSD-- 114

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             E+        +LD    ++   S V    +S+   +++ K      + + ++DL  + 
Sbjct: 115 --EQKATGNPPSVLDV---FYQERSAVLALRLSTKSNAIEAKKESAHHLSV-QMDLVKER 168

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            LL A  S+ QK+L+      ++  +S+ +L+  +  +    L L   + +Q   L  IN
Sbjct: 169 ILLLAERSNKQKELS------QRGFLSKAELDSSKGQI----LALEGALEDQSARLAAIN 218

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI----LEKTREQKTILSPIAGTIV 301
                 NLE  + + E    L +        + +L I    LE+      I +P+ G I 
Sbjct: 219 SEIRAMNLELKSMVAEDRLSLSEKAANNLKNLPQLKIQAFKLEQEINAARINAPVDGQIT 278

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK----QIQHVKKGYTATVRFPHYAD 357
                +    AQ  Q LM +     L     KVT K     I  V  G T  +     + 
Sbjct: 279 IQNVIAPGMVAQAGQTLMTL----SLPLFEPKVTLKIPVANIDQVAIGQTGKLTLTPLSQ 334

Query: 358 IREKKFKAIIEKIDP--IISQQDNNLQTQEYY--EVILKITDLAFSDNNI----ELRNGF 409
                 +  + KI P   +  + N L    +Y  E  L  +DL  +  N+     L    
Sbjct: 335 RDAPDIEVTVIKIAPQATLDPEQNPL----FYLAEARLDESDLEVARQNLGERFRLATDM 390

Query: 410 PAEVLFTAKNTTLAQEIIHPITD 432
           P  V    ++TT AQ +  P TD
Sbjct: 391 PVSVAVKGRDTTFAQFLFKPFTD 413


>gi|86144773|ref|ZP_01063105.1| secretion protein, HlyD family protein [Vibrio sp. MED222]
 gi|218675794|ref|YP_002394613.1| Secretion protein, HlyD family [Vibrio splendidus LGP32]
 gi|85837672|gb|EAQ55784.1| secretion protein, HlyD family protein [Vibrio sp. MED222]
 gi|218324062|emb|CAV25182.1| Secretion protein, HlyD family [Vibrio splendidus LGP32]
          Length = 463

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 91/446 (20%), Positives = 187/446 (41%), Gaps = 46/446 (10%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + ++  +  I WS    I+      G+++    +  +++   G++K+  
Sbjct: 27  NTPTSARIMLWVIVLFFVAAIGWSAWAEIDKVTVGQGKVIPSSQIQVVQNLEGGLVKEIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD--FLNNKYDVLEK 129
           V+ G ++ +G  LL  +D         ++  + NL  ++    ++L    +N ++ V   
Sbjct: 87  VKEGQRVQKGQQLLLIDDTRFRSDFREREQQVANLTANVLMLSASLTSVVINEEFSVK-- 144

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRL-DLENKSSL 187
             E ++  LLD+ GK               ++  L  KL  R ++ Y   L +L+N+ S+
Sbjct: 145 --EWKKSVLLDY-GK----------LAFPPLFYDLHPKLVNRQKAEYRQDLNNLKNQLSV 191

Query: 188 LRALLSSHQKDLTMMK----NLFEKNAVSQNDLN-----QQERIVYK-STLELRENIHEQ 237
               +   Q+DL  +K    NL +    ++ +L+       E +V K   L+L+  +++ 
Sbjct: 192 FDQQVGQKQQDLVEIKARVQNLRQSYNFARQELDITKPLADEGVVPKIELLKLQRQVNDT 251

Query: 238 KN----------MLRHINELYDEANLEFA-NYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           +           +LR   +    + ++ A N+  E    L Q Q   +        LE  
Sbjct: 252 RREMTSSELKIPLLRSAIKEAMLSRIDAALNFRSEQQEKLNQAQDKLSAMTESAVGLEDR 311

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  ++SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++   
Sbjct: 312 VNRTVVVSPVTGTVKTLGINTVGGVIQPGMDIVEIVPTEDSLLVEAKIAPQDIAFLRPEL 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIEL 405
           +A V+F  Y   +      ++E I    +Q +   +   +Y V ++    +F  N  + +
Sbjct: 372 SAVVKFSAYDFTKYGGLVGVLEHISADTTQDE---EGNSFYIVRVRTEKYSFGANEELPI 428

Query: 406 RNGFPAEV-LFTAKNTTLAQEIIHPI 430
             G  A V + T K T L + ++ PI
Sbjct: 429 IPGMTASVDIITGKRTVL-EYMLKPI 453


>gi|110632974|ref|YP_673182.1| HlyD family type I secretion membrane fusion protein [Mesorhizobium
           sp. BNC1]
 gi|110283958|gb|ABG62017.1| type I secretion membrane fusion protein, HlyD family
           [Chelativorans sp. BNC1]
          Length = 432

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 85/419 (20%), Positives = 165/419 (39%), Gaps = 37/419 (8%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           G+ G  TW+ L P+E +V + G+++ +     ++    GI+K   VE+G  +  G PLL 
Sbjct: 25  GLGGFATWAALAPLEGAVIAPGKVVVQGRNKTVQHLEGGIVKTILVEDGENVEAGDPLLV 84

Query: 87  FEDIETTDLID-----LKKVSIKNLRCHIDTEKS-ALDF-----LNNKYDVLEKAFESRE 135
            +        D     L  +     R   + E + ++ F      + K +++     + +
Sbjct: 85  LDGTAAKSAADRLRAQLAAIEATEARALAERESAKSISFPAHLLASQKPEIVR--LLADQ 142

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E   DF  + H      F   I+++             I  + +  E  +  L  L+   
Sbjct: 143 EAEFDFRLREHGAEIATFELQIAALE----------AQIAGHTVQQEETARQLELLVEER 192

Query: 196 QKDLTMM-KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           Q   T++ K L  K+ V     N+ E  ++    +L   I E +  +  I E  ++    
Sbjct: 193 QALETLLAKGLTRKSQVLALKRNEAE--LHGRQGQLAAAIAESRRTMAEIRERIEQVR-- 248

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            +    + S  L + +   A+ + +L   E    +  + +P +GT++    ++       
Sbjct: 249 -SARTSKASAQLSELRLKRAEVLEQLRAAEDVSGRLVVRAPASGTVINLAKYNPGAVIAP 307

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + LM IVP      + A++ P  I  ++ G  A + F  + D R+     I  K+  + 
Sbjct: 308 GEDLMSIVPEESGLVVEARIRPLDIDEIRVGQEARLNFSAF-DARQT--PPIETKVVYLS 364

Query: 375 SQQDNNLQTQEYYEVILKI---TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           + +  + + + YY   L+I   +   F  + I    G  AEV  T    T    I  P+
Sbjct: 365 ADRFESERGEPYYIARLEIPAGSGAGFDPSKIG--PGQEAEVFITTGERTFFGYIAAPL 421


>gi|283835509|ref|ZP_06355250.1| LapA secretion membrane fusion protein [Citrobacter youngae ATCC
           29220]
 gi|291068714|gb|EFE06823.1| LapA secretion membrane fusion protein [Citrobacter youngae ATCC
           29220]
          Length = 457

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 66/338 (19%), Positives = 135/338 (39%), Gaps = 11/338 (3%)

Query: 19  RMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+TL +I+ ++ L   W+    I+      G+ +    + +I++   GI+ +  V  G  
Sbjct: 45  RLTLWTILALVVLSFVWAGFAKIDEVTRGEGKAIPSSKLQKIQNLEGGIVTELYVHEGQI 104

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  GTPLL  +D      +   +     LR  +  E+   +  N  + V+     S+   
Sbjct: 105 VNAGTPLLHLDDTRFASNVGETEADKLGLRAKV--ERLTAEVENQDF-VISPEIASKAPD 161

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +     + +++  + F+  IS +   L  K   +R       D E+K    +  L   ++
Sbjct: 162 VARGETELYNSRREQFHNEISGLEEQLVQKKQELR-------DFESKQDQFKHSLGLIRQ 214

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++ M + L    A+S+ +L +  R   ++  +L             INE+ ++       
Sbjct: 215 EIKMSEPLLASGAISKVELLRLRRTEVETAGQLNSISLSLPKAASEINEIENKIGESRGR 274

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  +    L + +   +   + +  LE    +  + SP+ G +      +     Q    
Sbjct: 275 FQSDALAQLNEARTNLSKTQASVKALEDRVNRTMVTSPVRGIVQQVMVNTIGGVIQPGSD 334

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           L++IVP      I AK+ P+ I  +  G  A V+F  Y
Sbjct: 335 LVEIVPLDDKLLIEAKIQPRDIAFLHPGQHAMVKFTAY 372


>gi|78484551|ref|YP_390476.1| Type I secretion membrane fusion protein, HlyD [Thiomicrospira
           crunogena XCL-2]
 gi|78362837|gb|ABB40802.1| Type I secretion membrane fusion protein, HlyD [Thiomicrospira
           crunogena XCL-2]
          Length = 430

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 96/425 (22%), Positives = 176/425 (41%), Gaps = 54/425 (12%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +I L+ W+    ++  V   G+++    +  +++   GI++   V +G Q+ +G  LL  
Sbjct: 27  LIWLLVWASYAELDKIVRGQGKVVPSTKIQVVQNLEGGIVENIFVHSGDQVQKGQILLKL 86

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDF-------LNNKYDVLEKAFESREEQLLD 140
           ++ +     D  +  + +LR       SA  F       L ++   +E  FE RE+QL +
Sbjct: 87  DNTQFVSSYDETEAQLYDLRAQA-ARLSAEAFDKPFKINLPSENPKVEAIFE-REKQLYE 144

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH---QK 197
              +   T  ++ N  I+                  NR +L+   +  + L  S+   ++
Sbjct: 145 NQLQQLETTQQILNEKITQ-----------------NRSELQEAYNQFKQLSKSYDLLRQ 187

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD---EANLE 254
           ++ +MK L ++   S+ DL +  R    +  +L+   +    +   INE  +   EA  +
Sbjct: 188 EIEIMKPLVKEGIASEVDLLKTRREANDAYSQLQTTQNSIPRLKSVINESINKKQEAKQK 247

Query: 255 FANYLKEISRDLEQNQRTFADEMSKL----TILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           F N       + +Q   T   ++S+L    T LE    + +I SP+ GTI      +   
Sbjct: 248 FRN-------EAQQELNTVLAKLSQLESSKTALEDRVRRTSITSPVNGTISELLVTTIGE 300

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q    ++KIVP      +  K++P  I  V  G  A ++F  Y           +EKI
Sbjct: 301 VIQPGSDIIKIVPLDDSLVLETKISPADIGFVYPGLKAKIKFTAYDFAIYGGLDGTVEKI 360

Query: 371 --DPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
             D I+ ++ N+     +Y   +K TD   L    N + L  G  A V       T+ + 
Sbjct: 361 SADTILDEEGNS-----FYIARIK-TDRNYLGSEKNPLSLLPGMMATVDVVVGKHTILEY 414

Query: 426 IIHPI 430
           +I PI
Sbjct: 415 LIKPI 419


>gi|149202095|ref|ZP_01879068.1| Type I secretion membrane fusion protein, HlyD [Roseovarius sp.
           TM1035]
 gi|149144193|gb|EDM32224.1| Type I secretion membrane fusion protein, HlyD [Roseovarius sp.
           TM1035]
          Length = 399

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 122/258 (47%), Gaps = 31/258 (12%)

Query: 189 RALLSSHQKDLT----MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK---NML 241
           RALL + Q+D        K + +++A  +  L   E ++ K  + L E    +K   +  
Sbjct: 147 RALLKARQEDFVKRSEGAKRVMQQSAEEKRLL---EGLLEKKIVALIEVTRARKAHADSE 203

Query: 242 RHINELYDEANLE----FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +  +E+  +A LE    ++  LKE++  L QN R   D++++ T+L         LSP+ 
Sbjct: 204 KRYDEIITQAELERAEAYSETLKELA-TLRQNLRASQDQLNR-TVL---------LSPLR 252

Query: 298 GTIVYNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           G +V N S ++     +  + +++I+P  +  ++ A+V P+ I ++++G  AT++   Y 
Sbjct: 253 G-VVNNLSVTTIGGVVRPGEEILEIIPLDEEMFVEARVEPRNIANIRRGQEATIKLTAYD 311

Query: 357 DIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAE 412
                  K  ++ I  D    ++        +Y+V L++  + L      IE+R G  AE
Sbjct: 312 YTIYGTLKGRVDFISADTFKDERAREADGDPHYKVSLRVDMSALTPRQAGIEIRPGMQAE 371

Query: 413 VLFTAKNTTLAQEIIHPI 430
           V       T+ Q ++ P+
Sbjct: 372 VELHTGEKTVLQYLLKPL 389


>gi|323494908|ref|ZP_08100000.1| ABC transporter: Membrane fusion protein [Vibrio brasiliensis LMG
           20546]
 gi|323310872|gb|EGA64044.1| ABC transporter: Membrane fusion protein [Vibrio brasiliensis LMG
           20546]
          Length = 431

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 97/441 (21%), Positives = 179/441 (40%), Gaps = 82/441 (18%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +I  + WS++  ++    + G ++ E     ++S   G +K+  V+ G  +  G  L+ F
Sbjct: 30  VIIFVVWSLMTQVDEIAKAKGTVIPEGERQILQSEIGGKLKRVLVKEGDLVEAGQALVEF 89

Query: 88  E-DIETTDLIDLKK------VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           +   + T L +LK       +SI+ +   +D  +      + +Y  L      ++ QL  
Sbjct: 90  DATFQRTTLDELKSQQVTLVLSIERMNALLDQREPDFSLYSIEYPSL---VSEQQSQL-- 144

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL---LSSHQK 197
                  +  K   Y                + + L + D E  +  LR++   L S++K
Sbjct: 145 -------SAQKALYY---------------QQRVVLEK-DSEQIAEQLRSVNKALPSYEK 181

Query: 198 DLTMMK---NLFEKNAVSQN--------------DLNQQ--ERIVYKSTLELRENIHEQK 238
            L   K   N+ EK   + N               + QQ  E    +S LE +   +EQK
Sbjct: 182 QLLATKQELNILEKGFKAGNISRLRVLEMRQKLASIEQQIAEARGKRSVLERQAATNEQK 241

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQ-NQRTFADEMSKLTILEKTREQKTILSPIA 297
                I +L  EA ++ ++   +   DL   N R  + E +K++          + SP+ 
Sbjct: 242 -----IEQLLAEARVKVSDERSKAVSDLSALNARVRSSE-AKVS-------NTVVTSPLK 288

Query: 298 GTIVYNQSFSSSNYAQQSQP---LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           G +   QS  S+      QP   +++IVP +     +AK++P+ I  V++G    V+   
Sbjct: 289 GLV---QSVPSTQVGGVIQPGGTVVEIVPLTGKADFKAKLSPRDIGFVRQGQPVRVKVDA 345

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAE 412
           +   R    +  ++KI P  SQ   N + + YYEV++ +    F D+     +  G   E
Sbjct: 346 FDYSRFGALRGEVDKISPTTSQ---NERGEIYYEVVISVDKPYFHDDPERFAILPGMTGE 402

Query: 413 VLFTAKNTTLAQEIIHPITDN 433
              T    ++ Q +  PI  N
Sbjct: 403 ADITTGEKSVFQYLWKPIYTN 423


>gi|157803957|ref|YP_001492506.1| hypothetical protein A1E_03970 [Rickettsia canadensis str. McKiel]
 gi|157785220|gb|ABV73721.1| hypothetical protein A1E_03970 [Rickettsia canadensis str. McKiel]
          Length = 511

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 103/451 (22%), Positives = 167/451 (37%), Gaps = 65/451 (14%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +  L +IG  GL  W+ L P++    + G ++   N   I+    GII    V+ G ++ 
Sbjct: 91  IIFLVLIG--GL--WAALAPLDSGAVAIGIVIPSTNKKIIQHHEGGIINNIYVKQGDKVK 146

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL------------DFLNNKYDVL 127
           +G  L+   ++E T +    +  +   R  + TE   +            DFL    ++ 
Sbjct: 147 EGDKLI---ELEETRIKSEHENILGQYRHFLATENRLIAERDNLEQIEFSDFLMQDINLP 203

Query: 128 EKA---------FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           E A         F SR+E               ++N    ++Y+ +     ++       
Sbjct: 204 EVAKIIHTQENLFRSRKE---------------IYNSEKDALYQRIAQLEKKIEG----- 243

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             LE K          +Q  L  ++ L EK  V +  L  QE  V  S  E+     E  
Sbjct: 244 --LEAKKVAATKTTEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAASKSEIATTEAEIA 301

Query: 239 NMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              RH      E+ +   N    Y ++   +L   Q   A    K   L  +  +  I S
Sbjct: 302 GT-RHT---ITESQISIINLQNKYTEKTLTELRDAQVQTASLKEKYNALTDSLNRVIIRS 357

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P+ G +   +  +        Q +M+I P +    I AKV+ K I  V +G  A +RF  
Sbjct: 358 PVDGVVNNLKYHTIGGVIGHGQTIMEISPINDPLIIEAKVSQKNIDSVHEGLVAKIRFSA 417

Query: 355 YADIREKKFKAIIEKIDPIISQ---QDNNLQTQEYYEVILKITDLAFSD----NNIELRN 407
           +       F   +  I P I Q   Q    Q   YY   ++I    F+      N+ L  
Sbjct: 418 FKSRTTPTFTGKVVSISPDIVQDERQHPGQQQDNYYVARIEIDMDKFNKVAKVKNLALHP 477

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G  AEV       TL + ++ P+TD   K F
Sbjct: 478 GMQAEVQIVTGTRTLLRYLLDPVTDTAFKAF 508


>gi|186683672|ref|YP_001866868.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186466124|gb|ACC81925.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 515

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 84/382 (21%), Positives = 168/382 (43%), Gaps = 48/382 (12%)

Query: 14  PASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P    R  L  ++G  G+I  W++L  ++ + S+ G +  E    ++ SP +G I    V
Sbjct: 55  PKLWTRSMLYLLVGFAGIILPWAMLSKVDETGSARGRMEPEGATQKLDSPVTGSITAVNV 114

Query: 73  ENGSQILQGTPLLTFE-DIETTDL--IDLKKVSIKNLRCHIDTEKSALDFL------NNK 123
           + GS +  G  L+  E D+  TDL  +  K   + N R  +D  K+ +          NK
Sbjct: 115 KEGSTVKAGQILVQLESDVLRTDLQQVQTKLEGLLNRRSQLDLLKNQIILTINIQEQQNK 174

Query: 124 YDVLEK-AFESREEQLLDF-LGKYHS----------------TCSKV--------FNYGI 157
              LEK A  S+ +Q LD     Y+S                + +K+        F+  +
Sbjct: 175 SQELEKLAQVSQAQQNLDAKQSTYNSQRLEKLALVQQASQNISSTKIAQKLAKSRFSRDV 234

Query: 158 SSVYRSLKMKLTRMRSI-YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + V R    +L R  +I  +  ++LE  +   + L    + D+T  K  F++      +L
Sbjct: 235 TEVARY--RQLVRQGAIPQIKVVELEKIAEESQRLQEQAKSDITQAKLRFKE------EL 286

Query: 217 NQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           N+ + ++ ++  ++++   ++ EQ++  R + +    A L+    LK++   +   Q   
Sbjct: 287 NRYQSLMSQAFSDIQQAKLSLQEQQSSYRSVVQAGRLAVLKNQEQLKDLQGQITSLQSEI 346

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A   S++  L+   +Q+ + SPI GT+         +  +  Q + +I P++    ++A+
Sbjct: 347 AQTGSQIASLQLQMQQRIVRSPIDGTVFELPIHKPGSVVEPGQMIAQIAPNNTPLILKAQ 406

Query: 334 VTPKQIQHVKKGYTATVRFPHY 355
           +  +Q   +K G    ++F  Y
Sbjct: 407 MPSQQSGFLKVGMPVKIKFDAY 428


>gi|329848066|ref|ZP_08263094.1| protease secretion protein prtE [Asticcacaulis biprosthecum C19]
 gi|328843129|gb|EGF92698.1| protease secretion protein prtE [Asticcacaulis biprosthecum C19]
          Length = 468

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 93/449 (20%), Positives = 165/449 (36%), Gaps = 64/449 (14%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           L+  I  + L+ W+    ++ +V +SG+I    N  E+     GII    V+ G  + +G
Sbjct: 49  LVVFIFFVVLMGWATFARVDAAVYASGQIAVVGNRQEVAHKEGGIIAALHVKEGDVVRKG 108

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L+T    ET                    E +A   +    D      ++RE +LL  
Sbjct: 109 QELITMSGDET--------------------EANANALMAQFID-----LKTREARLLAE 143

Query: 142 LGKYHSTCSKVFNYGISSVYRSL---KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            G  +S    V    +   +R +    M L R +++  NR  L ++ S+L   ++  ++ 
Sbjct: 144 QGLRNSFAEPVEFADLPEAFRPVIDESMDLQR-KTMASNRTFLASQMSVLEQRVAQSEQQ 202

Query: 199 LTMMKNLFEKNAVSQ----------NDLNQQERIVYKSTLELRENIHEQKN--------- 239
           +   +     N   Q           DLN +          L+E+I   +          
Sbjct: 203 IIGNQEQMTSNQTRQALTKDELKGVEDLNARGYAPTTRVRALQESIAGMEGEYGALRAQV 262

Query: 240 --MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 I E   ++      YL ++  DL   Q        +L       ++  + +   
Sbjct: 263 AAARAQIGETQMQSVGIRKQYLDQVMADLNDTQGRLKTMEPQLVAARAAYDRLHVRATAT 322

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF----P 353
           G ++  Q F+     Q  Q L+ IVP S    I+A V  +    +K G  A VRF     
Sbjct: 323 GKVMGLQVFTVGGVIQPGQKLLDIVPESTPLVIQAMVPARNGNDIKSGQIAQVRFVSLHE 382

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD----NNIELRNGF 409
           H A I E K   +    D    ++  N     +Y   ++I+    +        +L+ G 
Sbjct: 383 HSAPILEGKVLDV--SGDSFTDKESGNT----FYTARVQISPETLATLSRMGTEQLKPGL 436

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           P EV+   +  T+ Q ++ P+  +  K F
Sbjct: 437 PVEVVVPMRERTVLQYLLEPLNQSLWKTF 465


>gi|71908814|ref|YP_286401.1| Type I secretion membrane fusion protein, HlyD [Dechloromonas
           aromatica RCB]
 gi|71848435|gb|AAZ47931.1| Type I secretion membrane fusion protein, HlyD [Dechloromonas
           aromatica RCB]
          Length = 471

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 105/247 (42%), Gaps = 29/247 (11%)

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE----------LRENIHEQKNMLRHINE 246
           ++L + K L    AVS+ +L + ER V +   E          ++ +IHE +  +     
Sbjct: 230 RELAVTKPLINSGAVSEVELLRLERDVSRYRGERDMASAQISRVQASIHEAQRKI----- 284

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             +E  L F N   + S++L +              L    +Q +I SP+ GT+      
Sbjct: 285 --EEVELTFRN---DASKELSETMAKLNSLAEGSVALSDRVKQSSIRSPVKGTVKRLLVN 339

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q  + +++IVP      + A+V P+ I  ++ G  A V+F  Y           
Sbjct: 340 TVGGVVQPGKDMIEIVPLEDTLLLEARVLPRDIAFLRPGQPAMVKFTAYDFSIYGGLDGT 399

Query: 367 IEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLA 423
           +E I  D +I ++ N      +Y V ++     F + N+ +  G  AEV + T K + LA
Sbjct: 400 LEHIGADSVIDEKGN-----AFYTVRVRTNKPGFGNANLPIIPGMVAEVDILTGKKSVLA 454

Query: 424 QEIIHPI 430
             +I P+
Sbjct: 455 Y-LIKPV 460


>gi|149914104|ref|ZP_01902636.1| Type I secretion membrane fusion protein, HlyD [Roseobacter sp.
           AzwK-3b]
 gi|149812388|gb|EDM72219.1| Type I secretion membrane fusion protein, HlyD [Roseobacter sp.
           AzwK-3b]
          Length = 395

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/410 (18%), Positives = 170/410 (41%), Gaps = 67/410 (16%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           ++ WS L  ++  V + GE ++      I++   GI+ +  V  G  + +G  L      
Sbjct: 33  VLIWSALASVDEIVRADGEFISSSRPQIIQNLEGGILSELLVNAGDIVERGDVLA----- 87

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                           R H    KS+++ L ++      A E R  +L        +  +
Sbjct: 88  ----------------RLHGTQFKSSVEELRDQI----TALEIRRLRL-------EAELA 120

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLN--RLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             F++ +     +   ++     + LN  + D   +S   R +L+   ++  +M+NL +K
Sbjct: 121 GQFDFTVPEELATRSPQIVASERVLLNARQTDFTKRSDGARKILAQAAEERALMENLLKK 180

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE----FANYLKEISR 264
           N V+               +E+     +  +  +  +E+  +  L+    +++ LKE++ 
Sbjct: 181 NVVA--------------LIEVTRTRKDHADAEKRYDEIVTQTELDRAEAYSDTLKELA- 225

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L QN ++  D++++ T+L          SP+ G +      +     +  + +++I+P 
Sbjct: 226 TLRQNLKSSLDQLNR-TVL---------TSPMRGVVNTVGVTTIGGVVRPGEQILEIIPL 275

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQ 382
            +  ++ A+V P+ I ++++G  AT++   Y        K  ++ I  D    +      
Sbjct: 276 DEELFVEARVAPENIANLRRGQEATIKLTAYDFTIYGTLKGTVDFISADTFKDENARAPD 335

Query: 383 TQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              +Y+V L++   +L    + IE+R G  A+V       T+ Q ++ P+
Sbjct: 336 GDPHYKVTLRVDTQNLTPRQSGIEIRPGMQAQVELHTGEKTVLQYLLKPL 385


>gi|70732680|ref|YP_262443.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas
           fluorescens Pf-5]
 gi|68346979|gb|AAY94585.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas
           fluorescens Pf-5]
          Length = 449

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 69/352 (19%), Positives = 138/352 (39%), Gaps = 40/352 (11%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL + G  G I W+ L P++  V+ SG+++   +   ++    GI+++ +V+ G ++  G
Sbjct: 35  LLVLGGFAGFIGWAALAPLDKGVAVSGKVMVSGHRKTVQHQSGGIVERIEVKEGDRVSAG 94

Query: 82  TPLLTFEDIE-TTDLIDLKKVSIKNL--RCHIDTEKSA---------LDFLNNKYDVL-- 127
             LL   +    T +  L+   + +L     ++ E+           L  L ++ DV   
Sbjct: 95  QVLLRLNETPLRTQMQSLRSQYLGSLASEARLNAERDGASDIVFDPQLQALASEPDVAAS 154

Query: 128 ----EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                + F SR + L             +   GI+      + +L   R    ++L    
Sbjct: 155 LSLQRQLFSSRRQAL------------SMEQQGIAETIAGSEAQLRGTRDSQASKL---- 198

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +  RAL     + L  ++ L     + +N L   ER+  +    + E+      + R 
Sbjct: 199 --AQRRAL----NEQLQGLRELARDGYIPRNRLLDSERLYAQIDGSIAEDFGRIGQLQRQ 252

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I EL         ++ K++   L   +    D  ++L   +       + +P AG +V  
Sbjct: 253 ILELRLRIRQTTEDFQKDLRSQLADTRVRTEDLRNRLASAQFELANSQVRAPAAGVVVGL 312

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + ++     +  QPLM IVP  +   + A+V  + +  V  G    + F  +
Sbjct: 313 EVYTEGGVIKPGQPLMDIVPQDEPLLVEARVPVQLVDKVHPGLPVELMFSAF 364


>gi|254451671|ref|ZP_05065108.1| type I secretion membrane fusion protein, HlyD [Octadecabacter
           antarcticus 238]
 gi|198266077|gb|EDY90347.1| type I secretion membrane fusion protein, HlyD [Octadecabacter
           antarcticus 238]
          Length = 389

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/285 (19%), Positives = 119/285 (41%), Gaps = 28/285 (9%)

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN--RLDLENKSSLLRALLSSHQKDLTM 201
           +  +  + +F++ +     +   ++       LN  + D   +++  +++++  Q++L +
Sbjct: 110 RLEAEIAGMFSFNVPDAIAAYSPEMVASERALLNARQSDYVGRTNGAQSIVTETQRELAV 169

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           M++LFE+                 + +E+        + L H NE+  +A L+ A+   +
Sbjct: 170 MEDLFERE--------------IAALIEVSRARKSNSDALNHYNEIITQAELDRASEYSD 215

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMK 320
           +   L       A     L + E    +  I SP+ G IV N   ++     +  + + +
Sbjct: 216 VLSAL-------ASLRQDLCVAEDRLTRTMITSPMRG-IVNNLGVTTIGGVIRPGEEIFQ 267

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           I+P     ++ A+V+P  I +V  G  AT++   Y          +++ I     +   +
Sbjct: 268 IIPLDDELFVEAEVSPSNIANVIPGQAATIKLSAYDYTIYGSLTGVVQLISADTFEDGRD 327

Query: 381 LQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEV-LFTAKNTTL 422
                +Y V L++  T+L      IE+R G  A+V L T   T L
Sbjct: 328 PNAPPHYRVTLRVNTTNLGERQAQIEIRPGMQADVELHTGSKTVL 372


>gi|260429518|ref|ZP_05783495.1| type I secretion membrane fusion protein, HlyD family [Citreicella
           sp. SE45]
 gi|260420141|gb|EEX13394.1| type I secretion membrane fusion protein, HlyD family [Citreicella
           sp. SE45]
          Length = 435

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 86/417 (20%), Positives = 180/417 (43%), Gaps = 25/417 (5%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-IE 91
           TW+    I  ++ + G+I  + N   ++ P  G++ +  VE G  +  G  L+  +  ++
Sbjct: 30  TWAATTEISGAIVAGGQIQVDQNRQVVQHPDGGVVSEILVEEGDVVETGDVLIRLDPTLK 89

Query: 92  TTDL--IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++L  +D +   +   R  ++ E+   D +    ++LE A ++      D + +  S  
Sbjct: 90  RSELKIVDDQYADLLARRARLEAERDGKDEIVFADELLEMAEKN------DQVEEMMSGQ 143

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +F     SV R ++    R   I      +E + S L       Q++L   ++L ++ 
Sbjct: 144 RNLFFARRDSVAREIEQLNKRSDQIANQIEGIEAQVSALSDQFDLIQRELADQQSLLDRG 203

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA-NLEFANYLKEIS--RDL 266
               + +   +R   +   E  E +  +      I E+  E   L+     + I+  RD+
Sbjct: 204 LAQASRVLALQREAARLAGERGELVASKAQAEGQITEIEIEVLKLDTTRREEAITTLRDM 263

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS-FSSSNYAQQSQPLMKIVPHS 325
           +   R  A++  +L + E+ +  + I +P+ G IVY  + F+     + ++P++ +VP  
Sbjct: 264 QFRSRELAEQ--RLALGEQLKRME-ITAPVGG-IVYGLTVFAPRAVIRSAEPVLYLVPQD 319

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ--DNNLQT 383
           +   I  ++ P  I  V      T+RF   A + ++    +  ++  + +    D N   
Sbjct: 320 RPLVISVQIEPIHIDQVHLDQDVTLRF---ASLDQRMTPELFGRVTRVSADAFVDENTSV 376

Query: 384 QEY-YEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLAQEIIHPITDNWPKIF 438
             Y  EV++  +++A      +L  G P E  L T + T LA  ++ P TD + + F
Sbjct: 377 SYYRAEVVMDDSEIAKLPEGTQLIPGMPVEAFLRTGERTALAY-LLKPFTDYFARAF 432


>gi|88811907|ref|ZP_01127160.1| Type I secretion membrane fusion protein, HlyD [Nitrococcus mobilis
           Nb-231]
 gi|88790791|gb|EAR21905.1| Type I secretion membrane fusion protein, HlyD [Nitrococcus mobilis
           Nb-231]
          Length = 416

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 90/437 (20%), Positives = 182/437 (41%), Gaps = 51/437 (11%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           ++   G  TW+ + P+  +  + G +  + N  +++    GIIK   V +G ++  G  L
Sbjct: 5   LVAFGGFGTWAAIAPLASAAIAPGVVTVDSNHKKVQHLEGGIIKTLLVRDGDKVKAGDVL 64

Query: 85  LTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           +  ++ +   +  ++  K  + + L   +  E+     +    D+L++  +    +LL  
Sbjct: 65  VQLDETQPQASLAILQTKSDAARALEARLLAERDDAAEIEFADDLLKRRVDPNVAELLS- 123

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKDLT 200
                         G  +++ + +  L     I  +R++ L+N  + +RA     QK   
Sbjct: 124 --------------GQETLFEARRNALKGETIILESRIEQLKNDIAGVRA----QQKAKE 165

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLEL-RENIHEQKNMLRHINELYDEANLEFANYL 259
               L E  A S   L Q+  +     L L RE    +     HI+E+  +AN +     
Sbjct: 166 HQIELVEDEARSLQKLLQKGYVGKPRYLALEREVARLEGERGEHISEIA-QANTKIGETK 224

Query: 260 KEISRDLEQNQRTFADEMSK-----LTILEKTREQKTIL------SPIAGTIVYNQSFSS 308
            +I +   + Q   ADE+       L + E+ R  + +L      +P++G++V     + 
Sbjct: 225 LQIIQLWREFQEKVADELRSIQADILDLKERIRAAQHVLEHIEIRAPVSGSVVGMAVHTV 284

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +  + ++ IVP      I A+V P+ I +V  G  A +RF  +   + +   +++ 
Sbjct: 285 GGVIKAGETVLDIVPVDDRLIIEARVQPQDIDNVHIGQEANIRFTAF---KRRNTPSLVG 341

Query: 369 KIDPIISQQDNNLQTQE-YYEVILKITDLAFSDNNI------ELRNGFPAEVLFTAKNTT 421
            +  I + +  + +T E YY+       LA SDN +       L+ G PAEV+      T
Sbjct: 342 HVSYISADRIVDSRTGEAYYK-----ARLAVSDNEVARLGDKHLQPGMPAEVMIKTGEGT 396

Query: 422 LAQEIIHPITDNWPKIF 438
             + +  P  D+  + +
Sbjct: 397 AIEYLARPFLDSLERAW 413


>gi|221134351|ref|ZP_03560656.1| membrane-fusion protein; multidrug resistance efflux pump
           [Glaciecola sp. HTCC2999]
          Length = 432

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 85/435 (19%), Positives = 177/435 (40%), Gaps = 40/435 (9%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K+  P   +R   L ++ I+ LI W+ +  ++  V++ G+++  + V  I+    GII+ 
Sbjct: 13  KQGEPNWRRRDVWLILLFIVALI-WASVAKVDRVVTAPGKVVPFNKVKVIQHLEGGIIET 71

Query: 70  FQVENGSQILQGTPL----LTFEDIETTDLID-LKKVSIKNLRCHIDTEKSALDFLNNKY 124
             V++  ++  G PL    L    +   +L+     + I   R   +T+ +     N+  
Sbjct: 72  LYVQDNQRVAAGDPLIELNLASSGVNVPELMARFGVLQIIQKRLMAETQGTEYVVDNDLP 131

Query: 125 DVLEKA-------FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D + ++       F+SR  +L               N  +S++ + LK    R+      
Sbjct: 132 DNIRQSGLAEKNTFKSRTNEL---------------NEVVSALEQQLKQAEKRV------ 170

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             +L+ K       L   +K+L +  NL     VS+ +  Q+ R V     E+       
Sbjct: 171 -AELQAKQQSQEQNLIIAEKELAISNNLVADKLVSELEHFQRLRAVETMKGEIAATTQAI 229

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              L  + E       E A +++  S +L   +R  A    +L   ++ + +  I +PI 
Sbjct: 230 AGALSVVVESQGRIREEQARFVRRASDELGDIERQMASVNEELIRAKEQKARSVIRAPID 289

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   +  +  N  +  +P+M++VP      I  K++P     V +   A ++   Y  
Sbjct: 290 GFVKNIKYQAIGNVIKPGEPIMEVVPEKDRLVIEVKLSPVDRGFVIQDQEALIKISAYDY 349

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLF 415
            R   +  I+  ++ I +      Q ++YY +I+  +   +   +  + ++ G   EV  
Sbjct: 350 FR---YGGIVGTVEGIAADTTIGQQEEQYYRIIINASQAYVGAPEQQMLIKPGMTGEVAI 406

Query: 416 TAKNTTLAQEIIHPI 430
              + ++   +I PI
Sbjct: 407 KVDSQSVLWALIKPI 421


>gi|307292901|ref|ZP_07572747.1| type I secretion membrane fusion protein, HlyD family [Sphingobium
           chlorophenolicum L-1]
 gi|306880967|gb|EFN12183.1| type I secretion membrane fusion protein, HlyD family [Sphingobium
           chlorophenolicum L-1]
          Length = 460

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 87/408 (21%), Positives = 154/408 (37%), Gaps = 71/408 (17%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSA---- 116
            G++    V+ G  + QG PL+     E      +   + + +K  R  +  E+      
Sbjct: 81  GGVVGAIFVKEGQHVRQGQPLMELASAEVRAQARMYGAQYIELKAQRARLIAEQLGASHV 140

Query: 117 ---LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              ++F   K    E A E+   QL  F  +     ++      + V R    ++ +   
Sbjct: 141 EWPVEFAAMKGQEKEDAEEAIRLQLTQFNARSSVLAAQ------TGVLRQQADQVRQTER 194

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
            Y ++L   ++ + L        ++L  ++++ EK  VS++ +   ER         R +
Sbjct: 195 GYRSQLAASSEQARLIG------EELNSLRDVAEKGFVSKSRIRALERA--------RAD 240

Query: 234 IHEQKNMLR-HINELYDEANLEFANYLKEISRDLEQNQRTFAD----EMSKLTILEKTRE 288
           +  Q+      I     EA     N LK +  +    +R  ++    E S   +L K R 
Sbjct: 241 LQGQEGQFSASIARSGAEAG---ENRLKALEAEKAYKERAASELRDVEFSLNEVLPKYRA 297

Query: 289 QK------TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            K       I +P  GT V    F+        Q LM IVP      I A+++P  I  +
Sbjct: 298 AKDQLARLQIRAPATGTTVGLSIFTVGGVISPGQKLMDIVPDRAGLVIEARISPDDIDDL 357

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-----------YEVIL 391
           K G  A +R           F ++ E+  PI+  Q + L    +            EVI+
Sbjct: 358 KIGQKAQIR-----------FNSLHERDLPIMDGQISRLSADSFQDEKTGASFYTAEVIV 406

Query: 392 KITDL----AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN-W 434
              +L    +    +  L+ G PA+VL   +  T  Q  + P+T + W
Sbjct: 407 PPAELKTIRSLRGGDFNLKAGMPAQVLVPLRQRTALQYALEPLTQSLW 454


>gi|288961985|ref|YP_003452295.1| type I secretion membrane fusion protein [Azospirillum sp. B510]
 gi|288914265|dbj|BAI75751.1| type I secretion membrane fusion protein [Azospirillum sp. B510]
          Length = 440

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 91/425 (21%), Positives = 174/425 (40%), Gaps = 62/425 (14%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           TW+ L+P+  +V ++G+++   N   ++    GI+    V+ G  +  G PL+ F     
Sbjct: 40  TWATLMPVREAVVTAGQVVPSGNAQVVQHLEGGIVSSILVKEGDLVEAGQPLVVF----- 94

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               D K+V  +             + +N +   LE     R E+L  F        + V
Sbjct: 95  ----DPKQVQAER------------EQMNARLLTLEL----RAERLRAFAAGRAPDLAGV 134

Query: 153 FNYGISSVYRSLKMKLTRMRSIY-LNRLDLENKSSLLRALLSSHQKDLTM----MKNLFE 207
              G  S     + ++   R IY   R   +   ++LRA +S  + +L +    + N+ +
Sbjct: 135 --AGPDSP--QTEAQIADQRLIYETQRQARDTAIAVLRAQVSQREAELALYQGQLANIKD 190

Query: 208 KNAVSQNDL---NQQERIVYKSTLELRENIHEQKNML---RHINE---LYDEANLEFANY 258
           + A+    +   N+ E +   S L+  E   EQ  ++   R I        +A  E  N 
Sbjct: 191 QIALITGSVDIRNKLESMGLSSKLQSLETQREQSRLMGEQRRIEGQLIATQQAITEAGNR 250

Query: 259 LKEISRDLEQNQRTFADEMSKLTI-LEKTREQK----------TILSPIAGTIVYNQSFS 307
           + + S  L Q+     +EM  +T  + + RE +          ++LSP+ G +   +  +
Sbjct: 251 ILDQSAKLSQD---AVNEMGTVTAEIAQLREARGKLDDRVQRLSVLSPVRGLVQDLRVNT 307

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                 +   LM+IVP      + A VTP+ + H++ G  ATV+   Y   R   + AI 
Sbjct: 308 IGAVVPEGGVLMQIVPVDHEMTVEAHVTPRDVGHLQVGQEATVKVLTYDFAR---YGAIT 364

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
             +  I +    + Q + YY+ ++ ++   +   D    +  G   +V       +L + 
Sbjct: 365 GTLQRISATTFLDEQRRPYYKAVVALSRNHVGRDDARHPVLPGMTTQVELATGERSLLEY 424

Query: 426 IIHPI 430
           ++ PI
Sbjct: 425 LLKPI 429


>gi|171058776|ref|YP_001791125.1| HlyD family type I secretion membrane fusion protein [Leptothrix
           cholodnii SP-6]
 gi|170776221|gb|ACB34360.1| type I secretion membrane fusion protein, HlyD family [Leptothrix
           cholodnii SP-6]
          Length = 468

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 97/446 (21%), Positives = 175/446 (39%), Gaps = 60/446 (13%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + R   A  + +   +++  + L+ W+ +  I+      G+++    +  ++S   G++ 
Sbjct: 48  MSREQTARAQLIVRAAVLVTLVLLAWAAIAEIDEITRGDGKVIPSRQLQVVQSYDGGVVT 107

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G Q+ +G  LL  ++   T  +         LR  +    + L  L      L 
Sbjct: 108 EILVREGDQVEEGQLLLRVDETRATSGVRESAAQAFALRVRL----ARLKALAEGGAFLP 163

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            A  + + + L  + +              ++Y+S   +L  M SI  NR  L  +   L
Sbjct: 164 PAPRAGDAEELRIVDEER------------NLYQSRASELQAMLSI--NRQQLTQRQQEL 209

Query: 189 ---RALLSSHQKDLTMMKN-------LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
              +A  SS Q+ L + +        L    A+S+ ++ + +R V +S  E+ +   +  
Sbjct: 210 SEAQARRSSAQRTLELSRQELNKTRPLLASGAISEVEVLRLDRDVSRSRGEVEQLTAQIA 269

Query: 239 NMLRHINELY---DEANLEFANYLKEISRDLE----------QNQRTFADEMSKLTILEK 285
            +   I E      E  L F N   E  RDL           Q     AD +SK      
Sbjct: 270 RVQASIGEAQRKTQETELSFRN---EARRDLSDVLGRLNALNQGAVALADRVSK------ 320

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 + SP+ G +    + +     Q  + +++IVP      + AKV PK I  +  G
Sbjct: 321 ----AQVKSPVRGRVQRLLANTVGGVVQPGKDIVEIVPLDDALVLEAKVQPKDIAFIHPG 376

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
             ATV+F  Y         A++E I P  +Q D   +   +Y V ++ T   F D    +
Sbjct: 377 QAATVKFSAYDFSIYGGLDALVENISP-DTQVDE--RGNAFYLVRVRTTQPNFGDQQ-PI 432

Query: 406 RNGFPAEV-LFTAKNTTLAQEIIHPI 430
             G  A V + T K + L+  ++ PI
Sbjct: 433 IPGMTASVDILTGKKSVLSY-LLKPI 457


>gi|116253399|ref|YP_769237.1| HlyD family secretion protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|15007262|gb|AAK77319.1| putative protein transporter PrsE [Rhizobium leguminosarum bv.
           viciae]
 gi|115258047|emb|CAK09146.1| HlyD family secretion protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 435

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 88/452 (19%), Positives = 175/452 (38%), Gaps = 51/452 (11%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR+    +  + +LSI  + G+  W+    +  +V   G I+ + +V +++    GI+ +
Sbjct: 9   KRSLNRHVAAVGVLSIALVCGIGGWAATTELSSAVIGEGVIVVDGDVKKVQHLTGGIVSE 68

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV 126
             V     +  G  L+  +   T   + + + ++  L   R  +  E+   D    + ++
Sbjct: 69  LLVSENDHVTAGQVLIRLDGTTTRANLSIVESTLAQLYARRARLKAERIGADSFEVEENI 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +    +  E+LLD   K   +       G+ S   S K +L       + +++  N + 
Sbjct: 129 RDLTSSTSAEKLLDGEQKLFDSRRTAL-IGMKSQLASRKDQLGEQVKGLVVQINATNDA- 186

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML----- 241
                L   +++L  +  L++K  V+   LN  +R    +  +L+ N  ++         
Sbjct: 187 -----LGLIEQELEGIDTLYKKGLVTLQRLNTLKR----ARADLQGNSGQEIAAKAEAEG 237

Query: 242 ------RHINELYDEANLEFANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTI 292
                 R   +L ++   E A  L ++   +   E+ + T  D++ +L I          
Sbjct: 238 KAIEIDRQSIQLDEDRRSEIAKDLTDVEAQIAEYEERRGTAVDQLHRLDIT--------- 288

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P+ G +      + +      Q LM +VP +    + AKV  + I  V  G +  VRF
Sbjct: 289 -APLTGRVHELSVHTVNGVIDPGQTLMLVVPENNELTVEAKVATRDIDQVHVGQSVDVRF 347

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNN------LQTQEYYEVILKITDLAFSDNNIELR 406
             +           I  I P I + +        L+ +   E I K+         I+L 
Sbjct: 348 SAFDQRTTPDVAGEITSIAPDIVKDERTGISYYPLRVKPKAESIAKL-------KTIKLY 400

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            G PAEV     + T+   +  P+TD    +F
Sbjct: 401 PGMPAEVFIKIGDRTVISYLTKPLTDQMQHVF 432


>gi|85705241|ref|ZP_01036340.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Roseovarius sp. 217]
 gi|85670114|gb|EAQ24976.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Roseovarius sp. 217]
          Length = 399

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 122/258 (47%), Gaps = 31/258 (12%)

Query: 189 RALLSSHQKDLT----MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK---NML 241
           RALL + Q+D        K + +++A  +  L   E ++ K  + L E    +K   +  
Sbjct: 147 RALLKARQEDFVKSSEGAKRVMQQSAEEKRLL---EGLLAKKIVALIEVTRARKAHADAE 203

Query: 242 RHINELYDEANLE----FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +  +E+  +A LE    ++  LKE++  L Q  R   D++++ T+L         LSP+ 
Sbjct: 204 KRYDEIVTQAELERAEAYSETLKELA-TLRQTLRASQDQLNR-TVL---------LSPLR 252

Query: 298 GTIVYNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           G +V N S ++     +  + +++I+P  +  ++ A+V P+ I ++++G  AT++   Y 
Sbjct: 253 G-VVNNLSVTTIGGVVRPGEEILEIIPLDEEMFVEARVEPRNIANIRRGQEATIKLTAYD 311

Query: 357 DIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAE 412
                  K  ++ I  D    ++  +     +Y+V L++   A +     IE+R G  AE
Sbjct: 312 YTIYGTLKGRVDFISADTFKDERARDPDGDPHYKVTLRVDMGALTPRQAGIEIRPGMQAE 371

Query: 413 VLFTAKNTTLAQEIIHPI 430
           V       T+ Q ++ P+
Sbjct: 372 VELHTGEKTVLQYLLKPL 389


>gi|149916054|ref|ZP_01904577.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. AzwK-3b]
 gi|149810128|gb|EDM69976.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. AzwK-3b]
          Length = 442

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 89/437 (20%), Positives = 172/437 (39%), Gaps = 43/437 (9%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M  L +  + G   W+    +  +V  SGE+  + ++  ++    GI+K   V  G  + 
Sbjct: 28  MAGLLVAAVFG---WAANSNLVSAVVVSGEVSVDRDLRVVQHRDGGIVKDIPVSAGDFVQ 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDV---LEKAFES 133
           QG  LL+ +D         ++  +      +   KS L+    L  ++ V   L++   S
Sbjct: 85  QGDILLSLDDTSAR----TERAILHGKIAELAIRKSRLEAQRDLRKEFSVPSGLDELIVS 140

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                  ++G++     ++F   +SS        ++R   I L    +  +   L A L 
Sbjct: 141 PAALQAIYVGEH-----RIFEGNLSSF-------ISRKEQIDLGIEQVRTEIDGLEARLD 188

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL-RENIH------EQKNMLRHINE 246
           + Q ++ ++K      +    DL++++  V      + REN+       E  + L     
Sbjct: 189 AKQDEILLVK----AESARVEDLSERQLTVRNVAFSIERENVRLRGEHGEILSALGRARS 244

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTREQKTILSPIAGTIVY 302
              E  LE  +  + +  D ++  R    ++S+LT    ++E T  +  I +PI+G I  
Sbjct: 245 RVSELELEILSMQETLRTDAQRELREIETQLSELTEKRFVIEDTLSRTEIRAPISGLIND 304

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               S       ++ L  IVP        A+V    I+ V  GY A +RF  +      +
Sbjct: 305 MNVNSVGGVISPAEILATIVPEEAELVFTARVPAVSIEQVDTGYAARMRFVAFDQNETPE 364

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +  +  +    +   +     ++Y + + +T D        ELR G P EV  T    T
Sbjct: 365 IEGTVSYV--AAAATSDPQMPGDFYSIKVDVTPDQLARLGGKELRPGMPVEVYVTTAERT 422

Query: 422 LAQEIIHPITDNWPKIF 438
               ++ P +D + + F
Sbjct: 423 ALSYLVKPFSDQFARAF 439


>gi|82702410|ref|YP_411976.1| Type I secretion membrane fusion protein, HlyD [Nitrosospira
           multiformis ATCC 25196]
 gi|82410475|gb|ABB74584.1| Type I secretion membrane fusion protein, HlyD [Nitrosospira
           multiformis ATCC 25196]
          Length = 454

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/416 (18%), Positives = 156/416 (37%), Gaps = 17/416 (4%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           + G+ G + W+ L P++  V  SG ++   N   ++    G I+   V+ G  +  GT L
Sbjct: 43  VGGVGGFLLWASLAPLDKGVPLSGTVMVATNRKAVQHQTGGTIEDIPVKEGDVVKAGTVL 102

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL---DF 141
           +    ++        K + + +R      ++A   L  + D  ++    RE + +     
Sbjct: 103 VRMNSVQV-------KANAETMRVQYFAARAAEARLIAERDGKKEIVFPRELENMKSDPI 155

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           +  Y     ++F+  +  +   L      +  + L    LE      +  L    + L  
Sbjct: 156 VATYIDMQKQLFSSRLLGIQSELSGIDESISGLKLQTSGLEESRDNKKQQLKFLGEQLEG 215

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           M++L  +  V++N L + ER   +    + E+I       R I EL          Y KE
Sbjct: 216 MRDLAAEGYVARNRLLELERTYAQINGSISEDIGNIGRARRQIVELKLRRVQRQQEYQKE 275

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           +  +L + Q+       KL+ L+       + +P+ GT+V    F+          +M I
Sbjct: 276 VRSELTEVQKEAEALAHKLSGLDYELANVLVKAPVDGTVVGLNVFTRGGVVSPGFKMMDI 335

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDN 379
           VP      +   +    I  V         F  +          I+  +  D ++ +   
Sbjct: 336 VPSDDPLTVEGHLPVHLIDKVHPDLPVEFIFTAFNRNLTPHVPGIVTHVSADRLVDEDSG 395

Query: 380 NLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
               + YY++  K+         ++++R G P E+       T+   I+ PI D++
Sbjct: 396 ----EPYYKLQAKVAPEGMKMIADLQIRPGMPVELFVKTGERTMMNYILKPILDHF 447


>gi|161505193|ref|YP_001572305.1| hypothetical protein SARI_03331 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866540|gb|ABX23163.1| hypothetical protein SARI_03331 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 411

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 103/438 (23%), Positives = 178/438 (40%), Gaps = 59/438 (13%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L R  L   + +  LI +  +  I+I    +G I    + + I SP SG I KF +  GS
Sbjct: 6   LSRKMLAVFMTVAALIVYICVAKIDIVSPGTGVITGASDKLVIVSPDSGFINKFDLRTGS 65

Query: 77  QILQGTPLLTFEDIET-------TDLI---DLKKVSIKN----LRCHIDTEKSALDFLNN 122
           ++  G  L ++ +++         +L+   D + VS++     L+  +  E S      +
Sbjct: 66  KVNIGDILFSYTNLDVFHQEKTLNELVLFADRRIVSLEEDQRLLKILLAGEISE----ES 121

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM----RSIYLNR 178
           ++    K F S+E      L +Y S         + +  ++LK++  +M      ++   
Sbjct: 122 EFSTENKDFFSQELSAYKLLNEYFS---------LRNEEKNLKLREEKMIEEKNDLHDRL 172

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           L L+ K +LL+   S+   ++ ++ N   K  +SQ  +  Q      S L L+ +I    
Sbjct: 173 LLLKRKGNLLK---SARAPEIEIINN---KTEISQ--IISQITTGEISLLSLQNDIKLAN 224

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           N  R                L   +  LEQ +R   +   +L +L    +  ++LSP  G
Sbjct: 225 NRFRS----------SVLEQLNNNAEQLEQLRRERLENRGQLELLRNKIKANSVLSPTNG 274

Query: 299 TIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA--TVRFPHY 355
            I+   +SF   +Y + SQP+M I   ++   I A++  K    +  G TA  TV  P Y
Sbjct: 275 IILSIERSFEKGSYVENSQPVMTIKKSNESKVIDARILAKYRPFIFMGTTAKITVNSPGY 334

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               +K     I +I       D     + YY+V +K  D       +E   G    V  
Sbjct: 335 ----KKTLSGEITRISADSFSDDEKNGAERYYKVEIKPDDKIIVPPELE---GVQVNVYA 387

Query: 416 TAKNTTLAQEIIHPITDN 433
            +K  TL   I   + DN
Sbjct: 388 LSKKVTLLNYITALVGDN 405


>gi|163852159|ref|YP_001640202.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium extorquens PA1]
 gi|218530917|ref|YP_002421733.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium chloromethanicum CM4]
 gi|254561905|ref|YP_003069000.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens DM4]
 gi|163663764|gb|ABY31131.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens PA1]
 gi|218523220|gb|ACK83805.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium chloromethanicum CM4]
 gi|254269183|emb|CAX25149.1| putative type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens DM4]
          Length = 448

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 84/432 (19%), Positives = 177/432 (40%), Gaps = 36/432 (8%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           LS   ++G+  W+    I  +V + G+++ E +V +++ P  G++ +     G ++  G 
Sbjct: 34  LSAALVLGVGGWATFTEISAAVIAPGQLVVETDVKKVQHPTGGVVGQLLAREGQRVAAGD 93

Query: 83  PLLTFEDIETTDLID--LKKVSIKNLRCHID-TEKSALDFLNNKYDVLEKAFESRE-EQL 138
            L+  ++ +T   +D  LK +   + R   D  E+  L  +    D++ +  +     +L
Sbjct: 94  VLIRLDETQTRANLDIVLKAMDELSARGARDEAERDGLKTITFPPDLVARINDDPSVARL 153

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +D  G+     S+V   G       L+ ++ ++R   +  L  +  +      L  H+  
Sbjct: 154 ID--GESRLFASRV--AGREGQRAQLRERVEQLRQ-EIAGLTKQAAAKDREINLIGHE-- 206

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYK----------STLELRENIHEQKNMLRHINELY 248
           L  +++L+ KN V  + +   ER   +          ST   R  I E +  +  I+   
Sbjct: 207 LGGVRDLYAKNLVPLSRVTALERDAARLEGERGQLVASTASARGKIAETELQIIQID--- 263

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  +    E+ +DL + +  +++   K    E   ++  + +P  G +      + 
Sbjct: 264 -------SEMRTEVGKDLAEIRGKWSELREKRVAAEDQLKRVELRAPQDGFVHQMSVHTV 316

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 S+P M IVP S    +  +V P+ I +V+ G  A +RF  +      +    + 
Sbjct: 317 GGLVTPSEPAMLIVPASDQLLVEVRVQPQDIDNVRVGQKAVLRFAAFNTRTTPEIDGEVV 376

Query: 369 KIDPIISQQDNNLQT-QEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           ++   ++Q   +++T Q YY   ++I  D       + L  G P E        ++   +
Sbjct: 377 RVSADVTQ---DVKTGQSYYTARIRIREDQKERLKGLRLVPGMPVESFTQIGERSVLSYL 433

Query: 427 IHPITDNWPKIF 438
             P+TD   K +
Sbjct: 434 TKPLTDQIAKAW 445


>gi|88658225|ref|YP_507757.1| HlyD family type I secretion membrane fusion protein [Ehrlichia
           chaffeensis str. Arkansas]
 gi|88599682|gb|ABD45151.1| type I secretion membrane fusion protein, HlyD family [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 505

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 92/444 (20%), Positives = 180/444 (40%), Gaps = 43/444 (9%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +L   GI G+  WS + P++ SV + GE++       I+    GII K  V+ G  + 
Sbjct: 77  IIILLFFGIFGI--WSAVAPLDGSVIAQGEVIPSSEKQIIQHLEGGIINKILVKEGELVQ 134

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +  P+++  +      +D+ K  + +L   + TE   +     KY+     F    + L 
Sbjct: 135 KNQPIISLHNTTAKANLDIIKERVLDL---LATEARLVAI---KYNYESLIFPDTLKNLS 188

Query: 140 DFLGKYH--STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ- 196
           D   +        ++F     +V   + +   R++ ++    +L   S+ L + ++ H+ 
Sbjct: 189 DEKTRIQIIKNQQQLFESHKKNVSGQIDILQQRIKQLH---QELSGLSAQLTSAITQHKL 245

Query: 197 --KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++L   K+L E   +S+  +   ER       E +  I + K+ +  +N+   E  LE
Sbjct: 246 INEELETKKSLLENGYISKPYIIALER----QYAESKGKIGQIKSAIASVNQKIGENKLE 301

Query: 255 FANYL----KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
             N       +I+ +L+       D   K+   +   ++  I SP AG I   +  +   
Sbjct: 302 IINITNNVQNKINLELKDVTSAITDLKEKMKTAQDILDRTIIRSPQAGIITGLKYHTEGG 361

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK---------------GYTATVRFPHY 355
                 P+  +VP +    I AK+  + I+ +                 G  A VR   Y
Sbjct: 362 VIPPGAPITNVVPLNDDLIIDAKIQTRHIEEILSAQMKDKNIVSYENYHGLKAKVRLSAY 421

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVL 414
              +      I+ ++      + N ++   YY++ + I  + +    N++L  G PAEV 
Sbjct: 422 NIRKIGLVNGIVVQVSADALSEVNGMR---YYKIQVIIPKEQSAKLKNLKLYPGMPAEVF 478

Query: 415 FTAKNTTLAQEIIHPITDNWPKIF 438
              ++ TL   +  PIT  + K F
Sbjct: 479 IITQSRTLFNYLFTPITSTFEKAF 502


>gi|73853296|ref|YP_308792.1| hemolysin D [Escherichia coli]
 gi|73476880|gb|AAZ76495.1| Hemolysin D [Escherichia coli]
          Length = 479

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 152/362 (41%), Gaps = 55/362 (15%)

Query: 31  LITWSILL------------PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            I WSILL             +E+   ++G+  +     EIK   + I++K  V++GS +
Sbjct: 59  FIIWSILLFVIISLLLSVLGKVEVVSVANGKFTHSGRSKEIKPIENAIVEKIMVKDGSFV 118

Query: 79  LQGTPL--LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-----YDVLEKAF 131
            +  PL  LT   +E+                  D  KS    L  K     Y +L ++ 
Sbjct: 119 KKNDPLVELTVPGVES------------------DISKSEASLLYEKTEQYRYAILSESI 160

Query: 132 ---ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL---TRMRSIYLNRLDLENKS 185
              E  E ++ DF G   +   + F   +SS+ +   M        + + LN+  +E  +
Sbjct: 161 QRNELPEIRITDFPGGEDNAGGEHFQR-VSSLIKEQFMTWQNRKNQKQLTLNKKIVERDA 219

Query: 186 SLLRALLSSHQ-----KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +L R  L  HQ     + L   K L  K AVSQ+ + +QE    ++  E    + +   +
Sbjct: 220 ALARVSLYEHQVSQEGRKLNDFKYLLNKKAVSQHSVMEQENSYIQAKNEHAVWLAQVSQL 279

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT---ILSPIA 297
            + I  + +E  LE   +  EI   +E+++++  + +     LEK R++K    I +P++
Sbjct: 280 EKEIELVREELALETNIFRSEI---IEKHRKSTDNIVLLEHELEKNRQRKASSFIKAPVS 336

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+      +       ++ LM IVP + +  + A V  K I  ++ G    ++   Y  
Sbjct: 337 GTVQELNIHTEGGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQAGQEVVIKVDAYPY 396

Query: 358 IR 359
            R
Sbjct: 397 TR 398


>gi|6409377|gb|AAF07963.1|AF193064_3 membrane forming unit [Caulobacter vibrioides]
          Length = 436

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/440 (18%), Positives = 162/440 (36%), Gaps = 75/440 (17%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           +GL+ W+   P++ +V ++G +  E N   ++    G++ K  V  G ++  G  L   +
Sbjct: 29  VGLLGWAAFAPLDSAVIANGVVSAEGNRKTVQHLEGGMLAKILVREGEKVKAGQVLFELD 88

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             +                       +A     N+Y  L KA E+R       L +    
Sbjct: 89  PTQAN---------------------AAAGITRNQYVAL-KAMEAR------LLAERDQR 120

Query: 149 CSKVFNYGISS------VYRSL---KMKLTRMRSIYLNRLDLENKSSL------------ 187
            S  F   ++       V R++   + + T  R     ++DL N   L            
Sbjct: 121 PSISFPADLTRLRADPMVARAIADEQAQFTERRQTIQGQVDLMNAQRLQYQSEIEGIDRQ 180

Query: 188 ---LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER-------IVYKSTLELRENIHEQ 237
              L+  L   + +L  ++ L++K  V +  L   ER        + + T +  + +   
Sbjct: 181 TQGLKDQLGFIEDELIDLRKLYDKGLVPRPRLLALEREQASLSGSIGRLTADRSKAVQGA 240

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +    + ++  E       + +++S+ + + +   A+   K  +    +++  I+SP+ 
Sbjct: 241 SDTQLKVRQIKQE-------FFEQVSQSITETRVRLAEVTEKEVVASDAQKRIKIVSPVN 293

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT    + F+     + ++PL+ I P  +   I+A   P  + +V  G    VR P +  
Sbjct: 294 GTAQNLRFFTEGAVVRAAEPLVDIAPEDEAFVIQAHFQPTDVDNVHMGMVTEVRLPAFHS 353

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN----GFPAEV 413
                    I+ +      QD     Q   +  L I  +        LR     G PA+V
Sbjct: 354 REIPILNGTIQSLS-----QDRISDPQNKLDYFLGIVRVDVKQLPPHLRGRVTAGMPAQV 408

Query: 414 LFTAKNTTLAQEIIHPITDN 433
           +      T+ Q +  P+ D 
Sbjct: 409 IVPTGERTVLQYLFSPLRDT 428


>gi|332716111|ref|YP_004443577.1| alkaline proteinase secretion protein [Agrobacterium sp. H13-3]
 gi|325062796|gb|ADY66486.1| alkaline proteinase secretion protein [Agrobacterium sp. H13-3]
          Length = 454

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 88/454 (19%), Positives = 187/454 (41%), Gaps = 63/454 (13%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +S+    LL+  G  G   W+   P+  ++ + G  +   N   ++    GIIK+  V  
Sbjct: 33  SSIGLAVLLASFGGFGY--WAGTAPLSAAIIAQGSFVATGNNKVVQHLEGGIIKEMMVSE 90

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY----DVLEKA 130
           G  + +G  LLT +  +TT L + +   ++ LR      +   +    K     D++ K 
Sbjct: 91  GDTVKEGDVLLTLD--KTTALANERMFQLRRLRLETIVTRLRAEAQGQKSFKVPDIVMK- 147

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN-KSSLLR 189
            E+ +  +   +     + + VF+  I  +   L +    ++S+       E  K S  R
Sbjct: 148 -EASDPDIKSII----QSQNIVFHSKIVKLDEQLNLIEKNIKSLEFRYAGYEGQKQSFDR 202

Query: 190 AL-LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            L L + ++D    + L +   + + D+   ER +  +            ++ R   E+ 
Sbjct: 203 QLALLTQERD--SKERLAKDGVIRKTDMLALERAIADA----------MGDIARLTGEM- 249

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKL-----TILEKTR------EQKTILSPIA 297
           +++  E A + +E    +  N++   D +        ++ E+ R      E+  I SP+ 
Sbjct: 250 NQSEAEIAKFKQEAVIAINANKQAALDALETAEADLDSVREQVRGAAEVLERTVIRSPVN 309

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+V     ++       +P+M+I+P      + A+V    I  + +G TA +R      
Sbjct: 310 GTVVRAYYHTAGGVITTGKPIMEILPAHVPLILEAQVLRTSIDQLHEGQTAAIR------ 363

Query: 358 IREKKFKAIIEKIDPIIS-----------QQDNNLQTQEYYEVILKITDLAFSD-NNIEL 405
                  A+  +  P+++           +++  LQ ++ Y V ++++D   +  +N   
Sbjct: 364 -----LSALNRRTTPVLNGKVFYVSADSIEENAGLQVKDVYIVRVQVSDEEIAKVHNFHP 418

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
             G PA+VL      T  + +  PI+++  + F+
Sbjct: 419 VPGMPADVLIQTSERTFFEYLTKPISESMSRAFK 452


>gi|149203392|ref|ZP_01880362.1| Type I secretion membrane fusion protein, HlyD [Roseovarius sp.
           TM1035]
 gi|149143225|gb|EDM31264.1| Type I secretion membrane fusion protein, HlyD [Roseovarius sp.
           TM1035]
          Length = 441

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 89/452 (19%), Positives = 178/452 (39%), Gaps = 54/452 (11%)

Query: 14  PASLKRMTLLSIIGII-------GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           PA+  R+    I+G++       G+  W+    +  +V + G +  + N+ +++    GI
Sbjct: 14  PAAFDRLRGRIILGVLMMFGLLGGVGAWAFNANLTGAVIALGTVKVDQNLKQVQHRDGGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLID-----LKKVSIKNLRCHIDTEKSALDFLN 121
           ++K  V  G ++  G  +   +D ++   +      L +  ++  R   D E +A     
Sbjct: 74  VEKISVREGDEVEAGQVMFRLDDAQSRAELSILSAQLDEAEVRRARLVADREGAAEVRFP 133

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN---------YGISSVYRSLKMKLTRMR 172
            +  +     + ++ +L+   G+       + N          GI+ V   + + L   R
Sbjct: 134 KRLSM----SDPQQSELMS--GELRLHAGNIVNRDNQREQLELGIAQVNDEI-VALVSQR 186

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           S   + L L  +S         H +    + NLFEK  +    +++ +R      +++R 
Sbjct: 187 SALTDELALVEES---------HSR----VVNLFEKGLIQMPRVDEAKR----ELVQMRG 229

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD----EMS-KLTILEKTR 287
            + E    +        E  +   + + E++R+  Q + T  +    E+S +LT ++   
Sbjct: 230 KLGELDANIARSRSRISEIEMRILS-VDEVARNEAQRELTVVEARIQELSDRLTAVQDKL 288

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +  I +PI+G I     F+       ++ L  IVP S    I  ++    I  V    T
Sbjct: 289 SRTEIRAPISGRINELSVFTEGGVITPAEILATIVPASAELRIEVQLPTTAIDQVYLDQT 348

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELR 406
           A VRF  +      +    I  I P  +   +    + +Y   + I+   F+  N + L 
Sbjct: 349 ARVRFSSFNHRTTPEILGTISHISPATTISAST--GEPFYIGYVDISPEEFARLNGLALM 406

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            G P EV  + +  T A     P+ D + K F
Sbjct: 407 PGMPTEVYLSTQEQTAAAYFARPLMDQFEKAF 438


>gi|239947572|ref|ZP_04699325.1| alkaline protease secretion protein AprE [Rickettsia endosymbiont
           of Ixodes scapularis]
 gi|239921848|gb|EER21872.1| alkaline protease secretion protein AprE [Rickettsia endosymbiont
           of Ixodes scapularis]
          Length = 391

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 105/270 (38%), Gaps = 17/270 (6%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE K          +Q  L  ++ L EK  V +  L  QE  V  S    + ++   +  
Sbjct: 124 LEAKKVAASKTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAAS----KSDVATTEAE 179

Query: 241 LRHINELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +  I     E  ++  N    Y +    +L + Q   A    K   L  +  +  I SP+
Sbjct: 180 IAGIRHAITETQIKIINQQNKYTERTLTELREAQVQTASLKEKYNSLTDSLNRVIIRSPV 239

Query: 297 AGTIVYNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            G IV N  + +        QP+M+I P +    I AKV+ K I  V +G    +RF  +
Sbjct: 240 DG-IVNNLKYHTIGGVISHGQPIMEISPINDPLIIEAKVSQKNIDSVHEGLVVKIRFSAF 298

Query: 356 ADIREKKFKAIIEKIDPIISQ---QDNNLQTQEYYEVILKITDLAFSD----NNIELRNG 408
                  F   +  I P I Q   Q    Q   YY   ++I    F+      N+EL  G
Sbjct: 299 KSRTTPTFTGKVVSISPDIVQDERQHPGQQQDNYYVARVEIDMDEFNKVAKVKNLELHPG 358

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             AEV       TL + ++ P+TD   K F
Sbjct: 359 MQAEVQIVTGTRTLLRYLLDPVTDTAFKAF 388


>gi|89075160|ref|ZP_01161596.1| putative secretion protein, HlyD family protein [Photobacterium sp.
           SKA34]
 gi|89049114|gb|EAR54680.1| putative secretion protein, HlyD family protein [Photobacterium sp.
           SKA34]
          Length = 464

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 76/370 (20%), Positives = 152/370 (41%), Gaps = 42/370 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + I+  I    W+    ++   + SG+++    +  +++   GI+KK  
Sbjct: 26  NTPKSARIILWVMILFFITAFIWAYFAKLDKVTTGSGKVIPSSQLQVVQNLEGGIVKKVL 85

Query: 72  VENGSQILQGTPLLTFEDIE--------TTDLIDLKKVSIK--NLRCHIDTEKSALDF-- 119
           V  G Q+ +G  LL  +D +        T  L  ++  S++   L   +    SA     
Sbjct: 86  VREGEQVKKGQTLLLIDDTQFKSDFKEKTQSLAAMQADSLRLNALLASVIVSDSADKTHW 145

Query: 120 -----LNNKYDVLEKAFESREEQLLDF-LGKYHSTCSKVFN-YGISSVYRSLKMKLTRMR 172
                L+ K  + +  F     +L+   L ++    + + N   ++S   S K +     
Sbjct: 146 RNSVTLDRKTPLFDDTFTKAHPKLVRRQLNQFTDKLNNLQNQLSVASEQASQKER----- 200

Query: 173 SIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
                  +L    S +  L SS+    K+  + K L E+  V + +L + +R    S  +
Sbjct: 201 -------ELAETQSRVNNLRSSYNIALKEYNITKPLAEEGVVPRIELLKLQR----SLND 249

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEK 285
            + +++  K  +        EA  ++ +   +   D++      +D++  L+     LE 
Sbjct: 250 TKRDLNSAKMQIPVTQAAIQEAGFKYIDIALQFRSDIQAQLNETSDKLGSLSETQIGLED 309

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             ++ T++SP+ GTI      +     Q   PL++IVP      I  K+ PK I  ++ G
Sbjct: 310 RVKRTTVISPVTGTIQKIHVNTVGGVIQPGMPLVEIVPTEDTLLIETKIAPKDIGFLRPG 369

Query: 346 YTATVRFPHY 355
             A ++F  Y
Sbjct: 370 LPAIIKFSAY 379


>gi|209808897|ref|YP_002264435.1| putative type I secretion protein, HlyD family [Aliivibrio
           salmonicida LFI1238]
 gi|208010459|emb|CAQ80818.1| putative type I secretion protein, HlyD family [Aliivibrio
           salmonicida LFI1238]
          Length = 429

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 29/256 (11%)

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-----LRENIHEQKNMLRHINELYDEA 251
           K++ MMK L +K  VSQ  + + +R  +++++E     L+  I+     L  + + ++  
Sbjct: 186 KEINMMKGLVKKGYVSQTKMFEIQR--HQASIESQREELQTKINVSTRQLTSLKQDFEAK 243

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           ++E    L   S  LE   + + D    L      R +  + S   GTIV     S    
Sbjct: 244 DIELKQSLSSQSNQLE---KEWLDTNQALITALDVRSRIKVRSEHTGTIVGLNIHSIGGV 300

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 +M+IVP+++   ++A + P+ I  V+ G TA VR   Y ++R  K   I   + 
Sbjct: 301 VNPGDIIMEIVPNNEQLIVQAIIKPEDIDVVRTGQTAKVRLNAY-NVR--KTPPITGTVI 357

Query: 372 PIISQQDNN---------LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
            + + + N          ++ Q   E I K+T       N+EL  G P +VL   +N TL
Sbjct: 358 YVAADRLNKKGEKESGYLVKVQLLQEEITKLT-------NVELYPGMPTDVLILLENRTL 410

Query: 423 AQEIIHPITDNWPKIF 438
                 P+ +++ K F
Sbjct: 411 WDYFTAPLFNSYYKAF 426


>gi|42541025|gb|AAS19412.1| PrtC [Photorhabdus sp. Az29]
          Length = 442

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 81/430 (18%), Positives = 180/430 (41%), Gaps = 36/430 (8%)

Query: 19  RMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+  L I +GI+G + W+ L P++  V+SSG ++ + N   +++P SGII + +V  G  
Sbjct: 24  RLGWLVIGVGILGFLIWAALAPLDKGVASSGVVVVDGNRKTVQAPASGIISQIKVVEGET 83

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL------EKAF 131
           I  G  L+    ++    +D  +     L   + TE   L   +    ++      +   
Sbjct: 84  IKAGQILVQLSQVQAKAQVDALQ---DQLHTTLATEARLLAEQHGDETLIFPEILRQLQS 140

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL--R 189
           E R ++++    +  ++  ++    +  + +S++    +++ +         KSSL+  R
Sbjct: 141 EPRVKEIIVLQKQLFASRREMLQSDLEGLEQSVEGTDFQIKGL---------KSSLVSKR 191

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               + ++ +T +K+L ++    +N   +    + +   EL   I E       + +   
Sbjct: 192 VQQVALKEQITNLKSLADEGYFPRNRYLE----LLREQAELNSGIAEMVGRAGQLEKQLQ 247

Query: 250 EANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E         A+Y +E+   L   Q   ++  +KL   +      +I++P+ GT+V    
Sbjct: 248 ETQQRIIQRKADYQREVRTQLADVQVAASEYRNKLDTAQFELTHTSIVAPVDGTVVGLNV 307

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF-- 363
           F+        + LM+I+P+     +  +V       + KG    + F  +   R  K   
Sbjct: 308 FTQGGVVAPGEKLMEILPNQMALEVETRVAVNLADKISKGMDVDLMFTAFNQNRTPKIEG 367

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
           K ++   D ++    +   +Q YY++   ++         ++++ G P EV     + +L
Sbjct: 368 KVVMVSADRLV----DPATSQPYYQMRAVVSPEGMEKLKGLDIKPGMPVEVFVKTGSRSL 423

Query: 423 AQEIIHPITD 432
              +  P+ D
Sbjct: 424 FSYLFKPLVD 433


>gi|84386166|ref|ZP_00989195.1| secretion protein, HlyD family [Vibrio splendidus 12B01]
 gi|84378936|gb|EAP95790.1| secretion protein, HlyD family [Vibrio splendidus 12B01]
          Length = 463

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 94/438 (21%), Positives = 178/438 (40%), Gaps = 45/438 (10%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + ++  I  I WS    I+      G+++    +  +++   G++K+  
Sbjct: 27  NTPTSARIMLWVIVLFFIAAIGWSAWAEIDKVTVGQGKVIPSSQIQVVQNLEGGLVKEIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD--FLNNKYDVLEK 129
           V  G ++ +G  LL  +D         ++  + NL   +    ++ +   +N ++ V   
Sbjct: 87  VREGQRVQKGQQLLLIDDTRFRSDFREREQQVANLTASVLMLSASFNSVVINEEFSV--- 143

Query: 130 AFESREEQLLD-----FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD---- 180
               ++  LLD     F  K +    K+ N    + YR     L    S++  +++    
Sbjct: 144 -ENWKQSVLLDYGKLAFPPKLYELQPKLVNRQ-KAEYRQDLNNLRNQLSVFDQQVEQKQQ 201

Query: 181 --LENKSSL--LRALLSSHQKDLTMMKNLFEKNAVS-------QNDLNQQERIVYKSTLE 229
             +E KS +  LR      +++L + K L ++  V        Q  +N   R +  S L+
Sbjct: 202 DLVEIKSRVNNLRQSYKFARQELDITKPLADEGVVPRIELLKLQRQVNDTRREMTSSELK 261

Query: 230 ---LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              LR  I E  +ML  I+     A L F +  +E    L Q Q   +        LE  
Sbjct: 262 IPLLRSAIKE--SMLSRID-----AALSFRSEQQE---KLNQAQDKLSAMTESSVGLEDR 311

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  ++SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++   
Sbjct: 312 VNRTIVVSPVTGTVKTLGINTVGGVIQPGMDIVEIVPTEDSLLVEAKIAPQDIAFLRPEL 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIEL 405
           TA V+F  Y   +    + ++E I    +Q +   +   +Y V ++    +F  N  + +
Sbjct: 372 TAIVKFSAYDFTKYGGLEGVLEHISADTTQDE---EGNSFYIVRVRTDKYSFGHNEELPI 428

Query: 406 RNGFPAEV-LFTAKNTTL 422
             G  A V + T K T L
Sbjct: 429 IPGMTASVDIITGKRTVL 446


>gi|312883070|ref|ZP_07742801.1| HlyD family type I secretion membrane fusion protein [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309369230|gb|EFP96751.1| HlyD family type I secretion membrane fusion protein [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 438

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 102/450 (22%), Positives = 203/450 (45%), Gaps = 58/450 (12%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSS--SGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + ++ +I I+ ++T+ +L  +E+  ++   G +  E N   I+    GI+    ++ G +
Sbjct: 18  LGIVGMILIVSIVTF-VLFGVELDSAAIAKGRVNVEGNRKLIEHLEGGIVDNVLIKEGQK 76

Query: 78  ILQGTPL--LTFEDIET-TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +  G  L  L+   I+T    ++ + +SI+  R  +++E+   D LN        A +++
Sbjct: 77  VNAGDQLIQLSANSIQTQVTQLEFRLLSIQAQRERLESERGNRDTLN-----FSDALKNK 131

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRS----LKMKLTRMRS---IYLNRLDLENKSSL 187
            EQ  + +G   +   K+     S ++ S    LK +  R+ S   + + +++ + K+  
Sbjct: 132 VEQYPNLIGILET--QKLLFLSRSELHNSEQAVLKARFQRVESQEAMLVQQIETKQKAYE 189

Query: 188 L---------RALLSSHQKDLTMMKNLFEKNAVSQN--DLNQQERIVYKSTLELRENIHE 236
           L         R L   H   L  ++   + N +S +   +  Q++  + S LE+ +    
Sbjct: 190 LLLQEFRMHDRLLEKGHSSRLKAIELKRKLNTISGDLIRIKGQKKDTHLSKLEVSQQQSA 249

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT-ILEKTREQKTILSP 295
            +N  R I E+  E        L++++R +E+     ++E+S++  IL +T    +I SP
Sbjct: 250 NRN--RFITEVEKE--------LQDLNRVVEE----LSEELSRVKEILSRT----SIRSP 291

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF--- 352
            +G I+  + FS  +     + LM+IVP      I+A + P  I  V  G  + VR    
Sbjct: 292 YSGKILGLKVFSKGDVISPGETLMQIVPEDGRMVIKANLHPDYIDEVVPGQKSMVRLLSY 351

Query: 353 -PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNNIELRNGFP 410
            P    + E +   I    D + S   ++ +   Y  +V+L   ++A +   I L  G P
Sbjct: 352 NPRSVPMIEGEVVHI--GADRLESSDLSSGELSGYEIKVVLNADEIA-AHPQIGLYPGMP 408

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
           AEV  T +  T  + +I PI+    +  +R
Sbjct: 409 AEVYITLRKRTPFEYLIEPISIGLMRSMKR 438


>gi|253687386|ref|YP_003016576.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251753964|gb|ACT12040.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 389

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 88/420 (20%), Positives = 162/420 (38%), Gaps = 75/420 (17%)

Query: 23  LSIIGIIGLITWSILLPI-EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LS++G++    W+    + E+SV S G++        I+S   GII +  V+ G+ + +G
Sbjct: 23  LSLLGLVVFFIWATFAVLDEVSVGS-GKVTPSTRAQVIESLDGGIIGQLYVQQGNVVEKG 81

Query: 82  TPLLT-----FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
             L       F+ +       ++ +     R H +     L F  +   + E A  +RE 
Sbjct: 82  QVLAQLDVNRFQSVYGEAFSRVQTLRASAERLHAELSGEPLKF--SAETLKEPALAARER 139

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           QL      Y S                      R+R+      +L+    L+       +
Sbjct: 140 QL------YES----------------------RLRNRDETVANLQQSMRLV-------E 164

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L M + L ++ A S  ++           + LR  I E +  +       DEA  ++A
Sbjct: 165 QELRMTEPLVQRGAASAVEV-----------IRLRRQISEIRGKI-------DEARNQYA 206

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ---KTILSPIAGTIVYNQSFSSSNYAQ 313
                  R  E+  +  AD  +++ ++    +Q    TI SP+ G +   Q  +     Q
Sbjct: 207 ------VRAREEQVKNNADLEAQMEVVSGKADQLKRATITSPVRGIVKDIQVTTVGGVLQ 260

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               LM+IVP      I  ++ P+ I +++ G  ATV+   Y           +E + P 
Sbjct: 261 PGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKITAYDSSIYGNLTGEVESVSP- 319

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIHPI 430
            + QD   + Q YY V ++ T    ++   E   +  G  A V       ++   +I P+
Sbjct: 320 DTLQDEVRRDQFYYRVYVRTTQAELTNKAGEKFPIVPGMVASVEIKTGQKSVLDYLIKPL 379


>gi|264679154|ref|YP_003279061.1| type I secretion membrane fusion protein, HlyD [Comamonas
           testosteroni CNB-2]
 gi|262209667|gb|ACY33765.1| type I secretion membrane fusion protein, HlyD [Comamonas
           testosteroni CNB-2]
          Length = 470

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 78/403 (19%), Positives = 159/403 (39%), Gaps = 25/403 (6%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ L  I+  V   G+++    V  ++S   GI+K+  V  G  + QG  +L  +    +
Sbjct: 76  WACLGRIDEVVRGQGKVVPSRQVQVVQSLDGGIVKEILVHPGEHVEQGQVILRIDPTRYS 135

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE------QLLDFLGKYHS 147
             +   K  +  L+     + + L  L +      + F++ E+      QL++   +   
Sbjct: 136 SSLGENKAELLALKA----KAARLQALASG-----EPFKAPEDVQALAPQLVEMERRMWE 186

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + S+  N  ++     L+ +   +R    NR    +  SL         ++L++ + L +
Sbjct: 187 SRSQELNTNVNIARDQLRQRQQELRETQANRDQASSSCSLT-------SEELSVTRPLLK 239

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             AVS+ DL + +R V +   E +    +   +   I E   +      N   +   +L 
Sbjct: 240 SGAVSEVDLLRLQRDVARFCGEAKAAGAQIGRIQAAIQEAERKIQESELNMRNQSRSELS 299

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + Q            LE   +   + SP+ GT+    + +     Q  + ++ IVP    
Sbjct: 300 ETQAKLGTLEQGKVALEDRVKLAEVRSPVRGTVNTLMANTVGGVVQPGKDILDIVPLDDT 359

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +  ++ P+ I  +  G  A V+F  Y D     +  +  K++ I +    + +   +Y
Sbjct: 360 LLMEVQINPRDIGFLHFGQQAEVKFTAY-DF--AIYGGLQGKLEQIGANTVTDEKGNSFY 416

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            V ++       D++  +  G  AEV       TL Q ++ PI
Sbjct: 417 VVKVRTEKAHVGDDSRPIIPGMQAEVHILTGKRTLMQYLLKPI 459


>gi|119384769|ref|YP_915825.1| HlyD family type I secretion membrane fusion protein [Paracoccus
           denitrificans PD1222]
 gi|119374536|gb|ABL70129.1| type I secretion membrane fusion protein, HlyD family [Paracoccus
           denitrificans PD1222]
          Length = 477

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 84/445 (18%), Positives = 182/445 (40%), Gaps = 46/445 (10%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P  L  + +L +IG  GL  WS+   I  +V +SG++  E     ++ P  G++ +  + 
Sbjct: 56  PVILGLVAMLVLIGGFGL--WSLTARISGAVVASGQVEVEQRRQVVQHPDGGVVAEILIH 113

Query: 74  NGSQILQGTPLLTFED-IETTDL--IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +G  +  G PL+  +  +  T+L  ++ +   I   R  ++ E++    +    +++ KA
Sbjct: 114 DGESVTAGQPLIRLDGALLNTELAIVEGQYFEILARRGRLEAERADGKEIAFPQELI-KA 172

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY--LNRLDLENKS-SL 187
             SR E     L       S +F   + ++ +SL     +   +   +  +D + ++   
Sbjct: 173 ASSRPE-----LQALVDGQSSLFLARLDTLEQSLGQLAKQAEQVQSQIGGVDAQTRALEQ 227

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            R  +S   +D    ++L EK       +   ER   +    L E    +   +  + E+
Sbjct: 228 QREFISQELRD---QRSLLEKGLAQAPRVLALEREAARLDGLLGEATASRARAVTQLAEI 284

Query: 248 YDEANLEFANYLKEIS---------RDLE--QNQRTFADEMSKLTILEKTREQKTILSPI 296
            D + LE     +E +         R+LE  + +R+  + +++L I           +P+
Sbjct: 285 -DLSRLEKTATRREAAETELRELGYRELELAERRRSLIERITRLEIR----------APV 333

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G +   Q  +  +  + + P+M I+P  +   + A++    I  V  G    +RF  ++
Sbjct: 334 SGVVQELQITTPRSVIRPADPIMFIIPQDRPLVVAARIATINIDEVHPGQEVVLRFSSFS 393

Query: 357 DIREKKFKAIIEKIDP--IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEV 413
                +   ++ ++ P  +I Q  +      YY   + I          ++L  G P EV
Sbjct: 394 SRTTPEIDGVLSRVSPDTLIDQATHA----PYYRAEVTIPPAEVEKLKGLDLVPGMPVEV 449

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIF 438
                  +    ++ P++D + + F
Sbjct: 450 YVQTGQRSPMAYLVKPLSDYFTRAF 474


>gi|126726165|ref|ZP_01742007.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacterales bacterium HTCC2150]
 gi|126705369|gb|EBA04460.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacterales bacterium HTCC2150]
          Length = 421

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 94/459 (20%), Positives = 195/459 (42%), Gaps = 86/459 (18%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           ++L  ++G  G  +WS    I  +V +SG +  + N   I+    GI+    ++ G  + 
Sbjct: 6   ISLAILVG--GFGSWSYFSQISGAVVTSGMVNVDQNRQVIQHIDGGIVTDIMIKEGDSVS 63

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL-NNKYDVLEKAFESREE-- 136
           QG+ L+  +  E                      +SALD + + +Y++L ++   R E  
Sbjct: 64  QGSVLMRLDPTEI---------------------QSALDVVVSQRYEMLARSARLRAESD 102

Query: 137 ---------QLLDFLGKYHST------CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                    +LL+   K+ +        S++F+  ++S+ + +  +L++ R  + N+++ 
Sbjct: 103 GQTSISFSQELLEAAKKFPNVNELVIGQSRLFDARLTSMKQEID-QLSKRRLQFGNQIEG 161

Query: 182 --ENKSSLLRAL-LSSHQKD---LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
               +++L R L L + ++D   + + K L + + V    L ++E  +  +  EL  ++ 
Sbjct: 162 FEAQQTALGRQLELINEERDAQQILLNKGLAQSSRVLA--LQREEARMQGALGELAASVA 219

Query: 236 EQKN--------MLRHINELYDEA-----NLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           E K         +LR      +EA     +LEF         +LE+N ++  + +S+L I
Sbjct: 220 ETKGRITELEIGVLRLETRRREEAITTLRDLEFRGV------ELEENVKSLTERLSRLDI 273

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                      +P++G +   + F+ S+  + ++PLM +VP  +   I  +++P  I  +
Sbjct: 274 R----------APVSGVVYGLRVFARSSVIRPAEPLMFLVPQDQPLVISTRISPLNIDQI 323

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL---KITDLAFS 399
                 T+RF  ++     +    I  + P   Q +   Q+    E++L   +I  L   
Sbjct: 324 HIDQPVTLRFSAFSARNTPELAGKIVLLSPDAFQDEATGQSFFTSEIVLLENEIDKLG-- 381

Query: 400 DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             N  L  G P E     ++ +    ++ P  D   K F
Sbjct: 382 --NQRLLPGMPVEAFIQTESRSPIVYLVKPFADYIKKAF 418


>gi|168750736|ref|ZP_02775758.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4113]
 gi|168757312|ref|ZP_02782319.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4401]
 gi|168769224|ref|ZP_02794231.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4486]
 gi|168769334|ref|ZP_02794341.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4486]
 gi|168776707|ref|ZP_02801714.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4196]
 gi|168783051|ref|ZP_02808058.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4076]
 gi|195940316|ref|ZP_03085698.1| hemolysin D [Escherichia coli O157:H7 str. EC4024]
 gi|208811376|ref|ZP_03253136.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4206]
 gi|208817435|ref|ZP_03258464.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4045]
 gi|208823306|ref|ZP_03263623.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4042]
 gi|209395593|ref|YP_002268406.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4115]
 gi|254667468|ref|YP_003082154.1| hemolysin transport protein [Escherichia coli O157:H7 str. TW14359]
 gi|187767965|gb|EDU31809.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4196]
 gi|188015160|gb|EDU53282.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4113]
 gi|188999506|gb|EDU68492.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4076]
 gi|189355670|gb|EDU74089.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361603|gb|EDU80022.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4486]
 gi|189361645|gb|EDU80064.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4486]
 gi|208730006|gb|EDZ79223.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4206]
 gi|208730612|gb|EDZ79311.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4045]
 gi|208736901|gb|EDZ84586.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4042]
 gi|209157048|gb|ACI34482.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4115]
 gi|254595820|gb|ACT75180.1| hemolysin transport protein [Escherichia coli O157:H7 str. TW14359]
          Length = 479

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 152/362 (41%), Gaps = 55/362 (15%)

Query: 31  LITWSILL------------PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            + WSILL             +E+   ++G+  +     EIK   + I++K  V++GS +
Sbjct: 59  FVVWSILLFVIISLLLSVLGKVEVVSVANGKFTHSGRSKEIKPIENAIVEKIMVKDGSFV 118

Query: 79  LQGTPL--LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-----YDVLEKAF 131
            +  PL  LT   +E+                  D  KS    L  K     Y +L ++ 
Sbjct: 119 KKNDPLVELTVPGVES------------------DILKSEASLLYEKTEQYRYAILSESI 160

Query: 132 ---ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL---TRMRSIYLNRLDLENKS 185
              E  E ++ DF G   +   + F   +SS+ +   M        + I LN+  +E  +
Sbjct: 161 QRNELPEIRITDFPGGEDNAGGEHFQR-VSSLIKEQFMTWQNRKNQKQITLNKKIVERDA 219

Query: 186 SLLRALLSSHQ-----KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +L R  L  HQ     + L   K L  K AVSQ+ + +QE    ++  E    + +   +
Sbjct: 220 ALARVSLYEHQVSQEGRKLNDFKYLLNKKAVSQHSVMEQENSYIQAKNEHAVWLAQVSQL 279

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT---ILSPIA 297
            + I  + +E  LE   +  EI   +E+++++  + +     LEK R++K    I +P++
Sbjct: 280 EKEIELVREELALETNIFRSEI---IEKHRKSTDNIVLLEHELEKNRQRKASSFIKAPVS 336

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+      +       ++ LM IVP + +  + A V  K I  ++ G    ++   Y  
Sbjct: 337 GTVQELNIHTEGGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQPGQEVVIKVDAYPY 396

Query: 358 IR 359
            R
Sbjct: 397 TR 398


>gi|240948249|ref|ZP_04752635.1| putative secretion protein [Actinobacillus minor NM305]
 gi|240297288|gb|EER47829.1| putative secretion protein [Actinobacillus minor NM305]
          Length = 477

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 91/404 (22%), Positives = 179/404 (44%), Gaps = 57/404 (14%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL--TFEDI 90
            WS L  IEI   ++G+IL       I+   +  +K+  V NG ++ +G  LL  T   +
Sbjct: 72  VWSYLGKIEIVAVATGKILPSGRSKIIQPIETATVKQSYVRNGQRVKKGDLLLELTILGV 131

Query: 91  ETTDLID----LKKVSIKNLRCHID----TEKSALDFLNNKYDVL---EKAFESREEQLL 139
           E+ +L      LK  S+  LR         E +     N+   V+   E     RE+QL 
Sbjct: 132 ES-ELFKAKSALKLASLNQLRQEAMLLAIQENTVPQLKNSNAQVIFGIEDGLFKREQQLA 190

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             L +Y +  ++        +  +++ K T  ++I++       +   +  +L   ++  
Sbjct: 191 --LSQYQAWIAEK-----QKLEATIRQKETEKKTIHI-------QIQKIVGMLKYEKERR 236

Query: 200 TMMKNLFEKNAVSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           + +  L++K   S+++  +Q+ R++    LE   NI + K  +  +    ++   E+  +
Sbjct: 237 SDIYGLYKKGHASKHEYFSQENRVI---ELENERNIQQSK--IYELESQLEQVRKEYQVF 291

Query: 259 LKEISRDLEQNQRTFADEMSKLTI-LEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQ 314
            +   R++    R   +++ +LT+ +EK ++++    I +P+ GT+   Q+++       
Sbjct: 292 EQSFHRNVLDELRKANEQVEQLTLEVEKNQQRQEYSEIYAPVDGTVQQLQTYTIGGVVTT 351

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH--YADIREK----KFKA 365
           +QPLM IVP  +   I A ++ K I  V +G   T++   FP+  Y  I+ K     F+A
Sbjct: 352 AQPLMTIVPQDEQFEIEAMLSNKDIGFVNEGQDVTIKIEAFPYTRYGYIKGKVKYFSFEA 411

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           I          QD  L       +++  + L+    N+EL  G 
Sbjct: 412 I----------QDEKLGLVFPVTIVMDKSHLSIEGRNVELIAGM 445


>gi|118592171|ref|ZP_01549564.1| Type I secretion membrane fusion protein, HlyD [Stappia aggregata
           IAM 12614]
 gi|118435143|gb|EAV41791.1| Type I secretion membrane fusion protein, HlyD [Stappia aggregata
           IAM 12614]
          Length = 441

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 92/468 (19%), Positives = 190/468 (40%), Gaps = 74/468 (15%)

Query: 10  KRNHPASLKRMT---------LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           K+ +PASL R +         L+  I   G   W+ L  +  +  ++G++  + ++  ++
Sbjct: 3   KQPNPASLLRRSIRFHWALGFLVVAICFFGTGIWASLAELSSAAIAAGKVSPDGSLRVVQ 62

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFED-IETTDLIDL----KKVSIKNLR-------- 107
               GI+++  V+ G  +  G  L+  +  + T + + +    ++ S+   R        
Sbjct: 63  HLEGGIVRELNVKEGDFVKDGQVLMVLDQALATANYLSIYRKHQRYSVTRDRLLAQERGD 122

Query: 108 --------CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
                     +  +KS   F++N+       F+ R E LLD      +   +V    + +
Sbjct: 123 EYFEVKMPSVMSVDKSYRQFVDNEI----TKFKVRRE-LLD----RQTKTYRVQAGQVEA 173

Query: 160 VYRSLKMKLTRM-RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN----LFEKNAVSQN 214
             +SL+ ++  M   I L   +LE+K  L++  L    + L + +       E+NA+   
Sbjct: 174 EIKSLEAQIDGMDEQIVLLDQELESKKVLMKKGLMRQPELLALQRKRAELWSERNAIGST 233

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
               +++I      EL     E++ + + ++E+    N E A                 A
Sbjct: 234 IARARQKIEEIKIAELTSVSEEREKVAKELSEI----NAEIAQ----------------A 273

Query: 275 DEMSKLT--ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           DE    T  IL +T     I+SPI G ++     +     +  +P++ IVP ++   +  
Sbjct: 274 DEALSATSDILSRTE----IISPIEGRVLKVNYKTVGGVVRPGEPIITIVPENEELILDT 329

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           ++    I +V  G  A V+   +     K  K  + ++       D     ++YY V ++
Sbjct: 330 RLRTSDIDNVMIGMGAKVQLTSFMGRHMKPLKGHVFQVGADAETDDQT--GEQYYTVRVR 387

Query: 393 IT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           +T  D+  +    EL  G PA+V       T  + ++ P+  ++ + F
Sbjct: 388 VTSDDILAAGGGFELVPGMPAQVFIQTGAHTPMRYLLDPVLQSFGRAF 435


>gi|317405669|gb|EFV85966.1| metalloprotease secretion protein [Achromobacter xylosoxidans C54]
          Length = 448

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/425 (18%), Positives = 151/425 (35%), Gaps = 43/425 (10%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           +G  G + W+   P++  V+  G ++       + S   G++    V  G  +  G  L+
Sbjct: 42  LGFGGFLAWAAWAPLDNGVAMPGIVVVTGERQAVDSIEGGVVSALLVAEGDPVRAGQALV 101

Query: 86  TFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLN----------NKYDVLEKA-F 131
             +D         +  ++ ++      +  E+   D L                +E+  F
Sbjct: 102 RLDDTRVRGEARSLRAQQAAVMAREARLLAERDGRDDLAPPDAQANAEAAAAYAMERQLF 161

Query: 132 ESREEQLLDFLGKYHST--CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            SR   L   L    +T   S+    G+ S   +L  K T+                  R
Sbjct: 162 ASRRAALAGELAGIEATLAGSRALAGGLES---TLAHKRTQ------------------R 200

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           ALL   ++ L  +++L  +  V +N + + ER + +   +L  ++       + I EL  
Sbjct: 201 ALL---REQLGNLRDLAREGYVPRNRVLELERSLAQLDGDLASDLGALGQTRQQIAELAL 257

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                   + +E+  DL + +        KL   E       I +P++GT+V   + +  
Sbjct: 258 RGQQRRDAFQREVRTDLAETRVQREQLTQKLATAEFDLAHSEIRAPVSGTVVALATHTVG 317

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              Q    LM+IVP      +  ++  + I  V+      + F  +   R  + +  +  
Sbjct: 318 GVVQPGSRLMEIVPEDVPLVVEGRLPVESIDKVRASLPVELMFTAFDASRTPRLEGTVTL 377

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           +     + D N   + YY +   +         +  LR G P EV       +L   +  
Sbjct: 378 VSADRFEDDRN--GRPYYRLRADVAPGQLRRIGDAPLRAGMPVEVFVRTGERSLLNYLFK 435

Query: 429 PITDN 433
           P+ D 
Sbjct: 436 PLLDR 440


>gi|83943845|ref|ZP_00956303.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Sulfitobacter sp. EE-36]
 gi|83955323|ref|ZP_00963978.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Sulfitobacter sp. NAS-14.1]
 gi|83840316|gb|EAP79490.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Sulfitobacter sp. NAS-14.1]
 gi|83845525|gb|EAP83404.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Sulfitobacter sp. EE-36]
          Length = 396

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 81/409 (19%), Positives = 175/409 (42%), Gaps = 59/409 (14%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++  + W+    ++  V + G +++      I++   GI+ +  V  G  + +G  L   
Sbjct: 31  VLVFLLWAAFAWVDEIVRAEGSMISSSRPQIIQNLEGGILAELAVGEGDHVEKGDVLA-- 88

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL-LDFLGKYH 146
                              R H    +SA+D L ++      AFE R  +L  +  G+Y 
Sbjct: 89  -------------------RLHGTQFQSAVDDLRDQI----SAFEIRRLRLEAELAGQYD 125

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                 +      +  S +  L   +S +++R +   +      +L+   K+  +++N+ 
Sbjct: 126 FDVPDAYATRTPDIVASERALLKARQSDFVSRSEGAGR------VLTEALKERELLENML 179

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +K  VS  ++ +  +    + ++L E +           EL  E   E+++ LKE++  L
Sbjct: 180 KKKIVSLIEVTRARKTHADARIKLDEIVTG--------TEL--ERAQEYSDVLKELA-TL 228

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVPHS 325
           +QN +   D++++ T+L         +SP+ G IV N S ++     +  + +++I+P  
Sbjct: 229 KQNLKASTDQLNR-TVL---------VSPLRG-IVNNLSVTTIGGVVRPGEEILQIIPLD 277

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQT 383
           +  ++ A+V P+ I  V+ G  ATV+   Y        K  ++ I  D    ++      
Sbjct: 278 EELFVEARVKPEDIAGVRPGQEATVKLSAYDYTIYGTLKGTVKLISADTFKDERSRAPDG 337

Query: 384 QEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             +Y+V L++    L     ++++R G  A V     + T+ Q ++ P+
Sbjct: 338 DPHYKVTLQVDTEHLTPRQASLQIRPGMQASVELHTGSKTVLQYLLKPL 386


>gi|118475239|ref|YP_891657.1| sape [Campylobacter fetus subsp. fetus 82-40]
 gi|4009448|gb|AAC97165.1| SapE [Campylobacter fetus]
 gi|118414465|gb|ABK82885.1| SapE [Campylobacter fetus subsp. fetus 82-40]
          Length = 427

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 85/438 (19%), Positives = 176/438 (40%), Gaps = 51/438 (11%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L ++GI G+  W    P+  +  + G++    N   ++    G++ K  V++G  + +G
Sbjct: 17  ILLLVGIFGV--WMGTAPLNSAAVAPGQVGVLSNKKVVQHLEGGVVDKIYVKDGDVVKKG 74

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY---DVLEKAFESR--EE 136
             L                + IKN+R +     S LD + ++Y    VL    E++  ++
Sbjct: 75  QVL----------------IEIKNVRLN-----SELDIVKSEYLQTSVLVSRLEAQRDDK 113

Query: 137 QLLDFLGKYHS-----TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRA 190
             ++F     S     + SK    G  S++      L    +I   R+D L  +   + A
Sbjct: 114 DQIEFSNDVKSYPDFESASK----GQISIFNEQNKLLKDEITILNQRIDQLRKQIEGINA 169

Query: 191 LLSSHQKDLTMM-------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           ++ + ++ +  +       + LF++    +  L   +R    +  E+   I +   +   
Sbjct: 170 IVDAKKQRVESLNEETKEWERLFKEQLTDKIRLRDIQRERTAAGGEIASGISDIAKLNVQ 229

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I E   +       + +++ +  E+ +    D  ++L  L+  +E+  + +P+ G +V  
Sbjct: 230 ITETKQQILFRERTFKEDVLKKYEEAKLKLTDLSARLRALDDQQERALVKAPVDGIVVEL 289

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            + +     +  + +M IVP      + AK+    I  V  G  A +RF  +     K  
Sbjct: 290 ATHTIGGVVRPGESIMSIVPDDSDYIMEAKMHITDIDKVHVGLPADIRFSAF---NSKTA 346

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD---NNIELRNGFPAEVLFTAKNT 420
             I  ++  + +    +     YYE+  K+T     +   N   L  G PAE++      
Sbjct: 347 HVIEGEVTYVSADTLKDSHGNPYYEIKAKLTKKGIEEVKKNGFFLVPGMPAEIIVKTGER 406

Query: 421 TLAQEIIHPITDNWPKIF 438
           T+   II P TD + + F
Sbjct: 407 TVLSYIIKPFTDMFQRAF 424


>gi|209551566|ref|YP_002283483.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537322|gb|ACI57257.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 449

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 95/223 (42%), Gaps = 12/223 (5%)

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM-SKLTILEKT 286
           L +   I +    +  +N   +E+  E A + +E    +  N++   D + +  + L+  
Sbjct: 224 LAIERAIADAMGDIARLNGEINESEAEIAKFRQEAVIAVNSNKQAALDALETAESDLDSV 283

Query: 287 REQ----------KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
           REQ           TI SP++GT+V +   ++       +P+M+I+P      + A+V  
Sbjct: 284 REQMREAAGVLERTTIRSPVSGTVVRSYFHTAGGVITTGKPIMEILPAHVPLILEAQVLR 343

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             I  +++G  A+VR            +  +  +     +++  L  ++ Y V + I D 
Sbjct: 344 TSIDQLREGEMASVRLTALNRRTTPVLEGKVFYVSADSIEENAGLSVKDVYIVRVAIPDS 403

Query: 397 AFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             +  +N     G PAEVL      T  + I  PITD+  + F
Sbjct: 404 EIARVHNFHPVPGMPAEVLIQTSERTFFEYISKPITDSMSRAF 446


>gi|240139491|ref|YP_002963966.1| putative type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens AM1]
 gi|240009463|gb|ACS40689.1| putative type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens AM1]
          Length = 448

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 81/432 (18%), Positives = 176/432 (40%), Gaps = 36/432 (8%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           LS   ++G+  W+    I  +V + G+++ E +V +++ P  G++ +     G ++  G 
Sbjct: 34  LSAALVLGVGGWATFTEISAAVIAPGQLVVETDVKKVQHPTGGVVGQLLAREGQRVAAGD 93

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESRE-EQL 138
            L+  ++ +T   +D+   ++  L       + E+  L  +    D++ +  +     +L
Sbjct: 94  VLIRLDETQTRANLDIVLKAMDELAARGARDEAERDGLKTITFPPDLVARINDDPSVARL 153

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +D  G+     S+V   G       L+ ++ ++R   +  L  +  +      L  H+  
Sbjct: 154 ID--GESRLFASRV--AGREGQRAQLRERVEQLRQ-EIAGLTKQAAAKDREINLIGHE-- 206

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYK----------STLELRENIHEQKNMLRHINELY 248
           L  +++L+ KN V  + +   ER   +          ST   R  I E +  +  I+   
Sbjct: 207 LGGVRDLYAKNLVPLSRVTALERDAARLEGERGQLVASTASARGKIAETELQIIQID--- 263

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  +    E+ +DL + +  +++   K    E   ++  + +P  G +      + 
Sbjct: 264 -------SEMRTEVGKDLAEIRGKWSELREKRVAAEDQLKRVELRAPQDGFVHQMSVHTV 316

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 S+P M IVP S    +  +V P+ I +V+ G  A +RF  +      +    + 
Sbjct: 317 GGLVTPSEPAMLIVPASDQLLVEVRVQPQDIDNVRVGQKAVLRFAAFNTRTTPEIDGEVV 376

Query: 369 KIDPIISQQDNNLQT-QEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           ++   ++Q   +++T Q YY   ++I  D       + L  G P E        ++   +
Sbjct: 377 RVSADVTQ---DVKTGQSYYTARIRIREDQKERLKGLRLVPGMPVESFTQIGERSVLSYL 433

Query: 427 IHPITDNWPKIF 438
             P+TD   K +
Sbjct: 434 TKPLTDQIAKAW 445


>gi|331681636|ref|ZP_08382269.1| membrane spanning export protein [Escherichia coli H299]
 gi|331080838|gb|EGI52003.1| membrane spanning export protein [Escherichia coli H299]
          Length = 387

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 81/428 (18%), Positives = 168/428 (39%), Gaps = 78/428 (18%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEIL--NEDNVVEIKSPFSGIIKKFQVENGSQ 77
           M +  ++ ++  + W+   P++      G I+  + + V++   P  GI+K  +V  G  
Sbjct: 19  MVIFLLVLVVTFVIWAWNSPLDEVTRGQGSIIPGSREQVIQTLDP--GILKTLEVREGDI 76

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFE 132
           + +G  LLT +D  ++ ++   +  + NL     R   +    +L F ++    +     
Sbjct: 77  VEKGQVLLTLDDTRSSAMLRESEARVNNLEAVRARLRAEAYSESLTFPDD----VPADLR 132

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            RE                      S+VYR  K +L   +SI      L+   +LL    
Sbjct: 133 ERE----------------------STVYRLRKTELA--QSIA----GLKQSKALL---- 160

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
               K++ M + +  + A+S+ +L + +R     + EL+  + E++N             
Sbjct: 161 ---DKEIAMTRPIVREGAMSEVELLRMQR----QSAELQLQMDEKQN------------- 200

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                YL E   +L + +   A     +       E+  I +P+ G +   +  +     
Sbjct: 201 ----KYLTEAGAELVKTEAELAQAKENMAGRADPVERSRIRAPLRGIVKNIRVNTLGGVV 256

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              Q +M+I+P      I A + P+ + +V+ G  A V+   Y          ++  + P
Sbjct: 257 SAGQDIMEIIPLEDQLLIEAYINPRDVAYVRTGMPALVKLTAYDYAIYGGLDGVVTLVSP 316

Query: 373 II---SQQDNNLQ---TQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLA 423
                 ++  +L+    + YY V++  ++   +D N   + +  G  A V       ++ 
Sbjct: 317 DTLRDQKRPGDLKLDPNEAYYRVLVTTSNNYLTDRNGKILPVIPGMIASVDIKTGQKSVF 376

Query: 424 QEIIHPIT 431
           Q +I PIT
Sbjct: 377 QYLIKPIT 384


>gi|218529318|ref|YP_002420134.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium chloromethanicum CM4]
 gi|218521621|gb|ACK82206.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium chloromethanicum CM4]
          Length = 458

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 75/426 (17%), Positives = 182/426 (42%), Gaps = 25/426 (5%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           + +  G+ G   W+  + ++ +V S+G I+ E +   ++    G+++   V++G  +  G
Sbjct: 46  IAAAFGVAG--AWAATVRLDRAVISTGVIVAETSRKVVQHFEGGMVQAVLVKDGQTVRSG 103

Query: 82  TPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             LL  + +++    DL +  +     L   +  E++  D L    D+  +  E    ++
Sbjct: 104 DVLLRIDPVQSQASADLFRNQLDAALILEARLRAEQAQSDDLQLPADIAARRNEPVLARM 163

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +D      +         ++ +   +    T +  + + +  +E +   +R       ++
Sbjct: 164 IDDQAGQLAERRTTLKGQLALIEAKVTQLRTEISGLAVEKSSVEQQVGFIR-------QE 216

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYDEANLEFA 256
           L  +++L E+N +  + L   ER   ++ LE  +  ++ E+      I+E   +   +  
Sbjct: 217 LEGLRSLHERNLIPLSRLLVMER--ERTRLEGVIGRSVAERAKAENAISEAGLQVT-QLK 273

Query: 257 NYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             L+E ++  L + ++   +   KL + +    +  I +   G I   + F+     +  
Sbjct: 274 QKLQEAVTGQLLETRQRIGELREKLVVAQDVFRRHEIRASHDGVIQGLKVFAIGQVVRSG 333

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           +PLM+IVP +    +  + +P  ++ V  G  A ++FP +   + ++  A+   +  ++S
Sbjct: 334 EPLMEIVPTADRLVVNVQFSPNDLEAVHAGMRAEIKFPTF---QARRTPAVFGTLT-VVS 389

Query: 376 QQD--NNLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           +    +    Q Y+   ++I +    ++    L  G PAEV+ +A   T  + +  P  D
Sbjct: 390 RDRLVDEGSKQAYFAGTVEIDEHQLPAEVRHRLLAGLPAEVVVSAGERTALEYLFAPFFD 449

Query: 433 NWPKIF 438
              + F
Sbjct: 450 AMGRAF 455


>gi|70730571|ref|YP_260312.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas
           fluorescens Pf-5]
 gi|68344870|gb|AAY92476.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas
           fluorescens Pf-5]
          Length = 438

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/419 (18%), Positives = 162/419 (38%), Gaps = 22/419 (5%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L+++G      W+ L P++  +   G ++       ++S  SG++ +  V  G  + QG
Sbjct: 25  ILALVGAGSFFVWAALAPLDQGIPVQGTVVVSGKRKAVQSMSSGVVSRILVREGESVKQG 84

Query: 82  TPLLTFEDIE-TTDLIDLKK------VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
            PL   +  +   D+  L+        S+   R   D  K  +DF       L  + + R
Sbjct: 85  QPLFRLDQTQVAADVQSLQAQYRMAMASLARWRSERDNLKQ-VDFPAP----LSDSDDPR 139

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
              +L+   +  S+  + F+   + +  +++    ++  +   R DL +++  LR  LS+
Sbjct: 140 LALVLEGQRQLFSSRREAFSREQAGIRANIEGATAQLAGMRRARTDLGSQAESLRQQLSN 199

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
                  ++ L +   + +N L + +R + +   EL +N  E   + + I E   +    
Sbjct: 200 -------LQPLADNGYIPRNRLLEYQRQLSQVQQELAQNTGESGRVEQGILESRLKLQQH 252

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              Y KE+   L + Q        +LT      +   I++   G  V     +     +Q
Sbjct: 253 SEEYQKEVRSQLAEAQLKTQTLEQQLTSAGFDLQHSEIIATADGIAVNLGVHTEGAVVRQ 312

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + L++IVP      +  ++    +  V       + F  +   R  +    +  I    
Sbjct: 313 GETLLEIVPQGTHLEVEGRLPVNLVDKVGTHLPVDILFTAFNQSRTPRVPGEVSLIS--A 370

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            Q  +      YY +   ++D A    N + ++ G PAE+       +L   +  P+ D
Sbjct: 371 DQMLDEKTGMPYYVLRSSVSDQAMEKLNGLVIKPGMPAEMFVRTGERSLLNYLFKPLLD 429


>gi|84684411|ref|ZP_01012312.1| probable HlyD family secretion protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667390|gb|EAQ13859.1| probable HlyD family secretion protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 389

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 43/262 (16%)

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK----------- 238
           ALL++ Q D            +S+ D  +Q      + L+L EN+ +QK           
Sbjct: 140 ALLAARQADF-----------ISRRDGAKQVLDEAATELQLLENMLDQKIVALIEVTKAR 188

Query: 239 ----NMLRHINELYDEANLEFANYLKEISRD---LEQNQRTFADEMSKLTILEKTREQKT 291
               + L   NE+  +  L+ A    E+ RD   L QN +   D++ + T+L        
Sbjct: 189 KAHADALTRYNEIVTQTELKRAEEYAEVLRDQATLRQNLKIAQDQLDR-TVLT------- 240

Query: 292 ILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
             SP+ G IV N + ++     +  + L +I+P      + A+V P+ I +V+ G  ATV
Sbjct: 241 --SPMRG-IVNNLAVTTIGGVVRPGEELAEIIPLGDQILVEARVKPEDIANVQPGQQATV 297

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNG 408
           +   Y        K  ++ I     + D       +Y VIL +     +D   ++E+R G
Sbjct: 298 KLSAYDYTIYGSLKGTVDLISADTFKDDRVRDGDPHYRVILSLDLSGLTDRQRSLEIRPG 357

Query: 409 FPAEVLFTAKNTTLAQEIIHPI 430
             A+V     + T+   ++ P+
Sbjct: 358 MVADVELHTGSKTILHYLVKPL 379


>gi|260460126|ref|ZP_05808379.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium opportunistum WSM2075]
 gi|259034337|gb|EEW35595.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium opportunistum WSM2075]
          Length = 444

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 89/451 (19%), Positives = 183/451 (40%), Gaps = 60/451 (13%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           PA L  + +++  GI G   W+   P+  +V +   +  E N   ++    G +K+ +V+
Sbjct: 25  PAYLGLLIIIAFFGIFG--GWAAFAPLNGAVLADAIVKVEGNRKSVQHFDGGTVKEIRVK 82

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLK-------KVSIKNLRCHIDTEKSAL---DFLNNK 123
           +G  + +G  +L  +D       +L        + +   +R  +D  ++     D L   
Sbjct: 83  DGDVVRKGDIMLKLDDTRIRSEFNLYAQQYALLRATDARIRAELDGSEAVAFPKDILKEH 142

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCS--KVFNYGISSVYRSLKMKLTRMRSIYLNRLD- 180
            D L  A  +   Q+ D   +  S     ++    I+ +   ++ K +R+ S Y  +L  
Sbjct: 143 EDYLRDAMAN---QIADLESQRASMAGAKQILERRIAELEEQIQGKQSRVES-YQAQLQS 198

Query: 181 -LENKSSL---LRALLSSHQKDLTM------MKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            ++ K+SL   L+A L++  + L +      ++ L ++N  +     Q       S  EL
Sbjct: 199 TVDEKASLSKLLKAGLTTRPRILELERSASDLQGLIDENLGAIGGSRQ-------SKAEL 251

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              I +  N  R                  ++S  L   Q   AD + K+   +   ++ 
Sbjct: 252 ESQIAQLTNERR-----------------AKLSAMLIDTQSNLADLVPKMFAAQAAMDRA 294

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P  G ++    FS        Q ++ IVP      ++A++  + I +++    A V
Sbjct: 295 EVRAPYDGQVMDLSVFSIGAIVAPGQTILDIVPTENSLIVQAQIRVEDISNLRPDMAAEV 354

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYY--EVILKITDLAFSDNNIELRN 407
           RF  Y   +++    I  ++  I + +  + +T   YY  +V +   +LA +   I L  
Sbjct: 355 RFTSY---KQRSIPIIHGRVTRISADRITDSKTGFPYYLADVAVDPGELAAA-PQIALYP 410

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G PA V+   +  T    ++ P+  ++   F
Sbjct: 411 GMPAAVMIVTEERTALDYVLGPLVVSFHSAF 441


>gi|1247761|emb|CAA60044.1| EHEC-hlyD [Escherichia coli]
          Length = 479

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 153/362 (42%), Gaps = 55/362 (15%)

Query: 31  LITWSILL------------PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           L+ WSILL             +E+   ++G+  +     EIK   + I++K  V++GS +
Sbjct: 59  LVVWSILLFVIISLLLSVLGKVEVVSVANGKFTHSGRSKEIKPIENAIVEKIMVKDGSFV 118

Query: 79  LQGTPL--LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-----YDVLEKAF 131
            +  PL  LT   +E+                  D  KS    L  K     Y +L ++ 
Sbjct: 119 KKNDPLVELTVPGVES------------------DILKSEASLLYEKTEQYRYAILSESI 160

Query: 132 ---ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS---IYLNRLDLENKS 185
              E  E ++ DF G   +   + F   +SS+ +   M     ++   + LN+  +E  +
Sbjct: 161 QRNELPEIRITDFPGGEDNAGGEHFQR-VSSLIKEQFMTWQNRKNPKQLTLNKKIVERDA 219

Query: 186 SLLRALLSSHQ-----KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +L R  L  HQ     + L   K L  K AVSQ+ + +QE    +   E    + +   +
Sbjct: 220 ALARVSLYEHQVSQEGRKLNDFKYLLNKKAVSQHSVMEQENSYIQPKNEHAVWLAQVSQL 279

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT---ILSPIA 297
            + I  + +E  LE   +  EI   +E+++++  + +     LEK R++K    I +P++
Sbjct: 280 EKEIELVREELALETNIFRSEI---IEKHRKSTDNIVLLEHELEKNRQRKASSFIKAPVS 336

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+      +       ++ LM IVP + +  + A V  K I  ++ G    ++   Y  
Sbjct: 337 GTVQELNIHTEGGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQPGQEVVIKVDAYPY 396

Query: 358 IR 359
            R
Sbjct: 397 TR 398


>gi|331656296|ref|ZP_08357258.1| membrane spanning export protein [Escherichia coli TA206]
 gi|331054544|gb|EGI26553.1| membrane spanning export protein [Escherichia coli TA206]
          Length = 393

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 81/428 (18%), Positives = 168/428 (39%), Gaps = 78/428 (18%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEIL--NEDNVVEIKSPFSGIIKKFQVENGSQ 77
           M +  ++ ++  + W+   P++      G I+  + + V++   P  GI+K  +V  G  
Sbjct: 19  MVIFLLVLVVTFVIWAWNSPLDEVTRGQGSIIPGSREQVIQTLDP--GILKTLEVREGDI 76

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFE 132
           + +G  LLT +D  ++ ++   +  + NL     R   +    +L F ++    +     
Sbjct: 77  VEKGQVLLTLDDTRSSAMLRESEARVNNLEAVRARLRAEAYSESLTFPDD----VPADLR 132

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            RE                      S+VYR  K +L   +SI      L+   +LL    
Sbjct: 133 ERE----------------------STVYRLRKTELA--QSIA----GLKQSKALL---- 160

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
               K++ M + +  + A+S+ +L + +R     + EL+  + E++N             
Sbjct: 161 ---DKEIAMTRPIVREGAMSEVELLRMQR----QSAELQLQMDEKQN------------- 200

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                YL E   +L + +   A     +       E+  I +P+ G +   +  +     
Sbjct: 201 ----KYLTEAGAELVKTEAELAQAKENMAGRADPVERSRIRAPLRGIVKNIRVNTLGGVV 256

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              Q +M+I+P      I A + P+ + +V+ G  A V+   Y          ++  + P
Sbjct: 257 SAGQDIMEIIPLEDQLLIEAYINPRDVAYVRTGMPALVKLTAYDYAIYGGLDGVVTLVSP 316

Query: 373 II---SQQDNNLQ---TQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLA 423
                 ++  +L+    + YY V++  ++   +D N   + +  G  A V       ++ 
Sbjct: 317 DTLRDQKRPGDLKLDPNEAYYRVLVTTSNNYLTDRNGKILPVIPGMIASVDIKTGQKSVF 376

Query: 424 QEIIHPIT 431
           Q +I PIT
Sbjct: 377 QYLIKPIT 384


>gi|295690625|ref|YP_003594318.1| HlyD family type I secretion membrane fusion protein [Caulobacter
           segnis ATCC 21756]
 gi|295432528|gb|ADG11700.1| type I secretion membrane fusion protein, HlyD family [Caulobacter
           segnis ATCC 21756]
          Length = 435

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 75/427 (17%), Positives = 173/427 (40%), Gaps = 36/427 (8%)

Query: 24  SIIGI--IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +IIG+  +GL+  +  +P+  SV ++G +  E N   I+    G+++K  V  G ++  G
Sbjct: 22  AIIGVMLLGLVVAA-FMPLSASVIANGVVSAEGNRKTIQHLEGGMLRKILVREGERVKAG 80

Query: 82  TPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKS-------ALDFLNNKYD-VLEKA 130
             L   +  +      + K   V++K L   +  E+          D L+ + D ++ +A
Sbjct: 81  QVLFELDPTQANAAAGITKNQYVALKALEARLVAERDQRASISFPADLLSQRSDPMVARA 140

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
               E Q  +           V                   R  Y   ++ ++ ++  L+
Sbjct: 141 IADEEVQFQERRQTIQGQVDLVNG----------------QREQYQREIEGIDRQTQGLK 184

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L   Q +L  ++ +++K  V +  L   ER     +  +     ++   ++ I++   
Sbjct: 185 DQLGFIQDELGDLRKIYDKGLVPRPRLLALEREQASLSGSIGRLTADRAKAVQGISDTQL 244

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +       + +++S+ + + +   A+   K  +      +  ++SP++GT    + F+  
Sbjct: 245 KTRQIRQEFFEQVSQSITETRVKLAEVTEKELVASDALRRIKVVSPVSGTAQNLRFFTEG 304

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              + ++PL+ I P  +   I+A   P  + ++  G T  VR P +     ++   +  K
Sbjct: 305 AVVRPAEPLVDIAPDDEAFIIQAHFAPTDVDNIYAGMTTEVRLPAF---HSREIPILNGK 361

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR--NGFPAEVLFTAKNTTLAQEII 427
           I+ I   +  + + +  Y + +   D+      +  +   G PA+V+   +  T+   +I
Sbjct: 362 IESISRDRLTDPEGKTSYFLGIVTVDIKQLPKPMRAKVSAGMPAQVIVPTRARTVLDYLI 421

Query: 428 HPITDNW 434
            P+ D  
Sbjct: 422 SPLRDTL 428


>gi|330447992|ref|ZP_08311640.1| type I secretion membrane fusion, HlyD family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492183|dbj|GAA06137.1| type I secretion membrane fusion, HlyD family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 464

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 73/370 (19%), Positives = 151/370 (40%), Gaps = 42/370 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + ++  I    W+    ++   + +G+++    +  +++   GI+KK  
Sbjct: 26  NTPKSARVILWVMVLFFITAFVWAYFAKLDKVTTGTGKVIPSSQLQVVQNLEGGIVKKVL 85

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD--FLNNKYD---- 125
           V+ G Q+ +G  LL  +D +       K  S+  ++       + L    +NNK D    
Sbjct: 86  VKEGEQVKKGQTLLLIDDTQFKSDFQEKTQSLAAMQADSLRLNALLASVTVNNKSDNTKW 145

Query: 126 -----------VLEKAF-----ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                        ++AF     E    QL  F  K ++  +++      +  +  ++  T
Sbjct: 146 RNSVTVESKPPAFDEAFKKAHPELVRRQLNQFTDKLNNLQNQLAVASQQASQKERELAET 205

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           R R             S L++      K+  + K L E+  V + +L + +R    S  +
Sbjct: 206 RAR------------VSNLQSSYGIAMKEYNITKPLAEEGVVPRIELLKLQR----SLND 249

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEK 285
            + +++  K  +        EA  ++ +   +   D++      +D++S L+     LE 
Sbjct: 250 TKRDLNSAKMQIPVTQAAIQEAGFKYIDIALQFRSDIQAQLNETSDKLSSLSETQIGLED 309

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             ++ T++SP+ GTI      +     Q   PL++IVP      I AK+ P+ I  ++  
Sbjct: 310 RVKRTTVVSPVNGTIQKIHVNTVGGVIQPGMPLVEIVPTEDTLLIEAKIAPQDIGFLRPN 369

Query: 346 YTATVRFPHY 355
             A ++F  Y
Sbjct: 370 LPAIIKFSAY 379


>gi|51245961|ref|YP_065845.1| secretion proteins [Desulfotalea psychrophila LSv54]
 gi|50876998|emb|CAG36838.1| related to secretion proteins [Desulfotalea psychrophila LSv54]
          Length = 429

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/336 (21%), Positives = 140/336 (41%), Gaps = 58/336 (17%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L +I  + +I W+ +  +     + GE++    V  I+S   G++ +  V  G Q+  G 
Sbjct: 60  LLLIAFVIVILWASVFQLNQVARARGEVIASSRVQIIQSVDGGVLAELNVREGDQVKPGQ 119

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L   +   +         S+K +   +   K+    L  +   ++K      E+LL   
Sbjct: 120 VLARLDQTRS-------GASVKEIEARLSALKAKATRLRAEVTEVDKLIFP--EELL--- 167

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            K+  T +         V R+L  +          R  L+ +   L+  +   Q+++T++
Sbjct: 168 -KHPETVA---------VERALFQQ---------RRTGLKEELKTLKVAVKLAQEEVTLL 208

Query: 203 KNLFEKNAVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            NL     V+++++ + +R +   KS L +R+N H            ++EA+ E      
Sbjct: 209 TNLERSGDVNRSEVIRTKRALNDAKSKLIVRKNRH------------FEEASTELIKAED 256

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNYAQQSQPLM 319
            I+    QN++ FA    +L        + ++ + +   IV N   ++     +  + LM
Sbjct: 257 GIA----QNEQIFAQRKQQL--------EDSVFTALVPGIVKNVRVTTVGGVLRAGEELM 304

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           +I+P      I AKV+P  I  V+ G  AT+RF  +
Sbjct: 305 QIIPVGDDLIIEAKVSPTDIALVRPGLVATIRFDPF 340


>gi|209809827|ref|YP_002265366.1| secretion protein, HlyD family [Aliivibrio salmonicida LFI1238]
 gi|208011390|emb|CAQ81855.1| secretion protein, HlyD family [Aliivibrio salmonicida LFI1238]
          Length = 463

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 171/403 (42%), Gaps = 54/403 (13%)

Query: 12  NHPASLKRMTLLSIIGIIGLIT--WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           N P + K   LL II +   I+  W+    I+      G+++    +  +++   G++K 
Sbjct: 27  NTPTNAK--ILLWIIAVFFCISIAWASWAEIDKVTVGQGKVIPSSQLQIVQNLEGGLVKD 84

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL-----NNKY 124
             V+ G Q+ +G  LL  +D         +K  + NL        +++D +     NNK 
Sbjct: 85  MLVKEGDQVTKGQQLLLIDDTRFRSDFRERKKQLINLTASAQQLSASMDSILIQDINNKK 144

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL-------- 176
              E    S ++ + D   ++      V    ++  YR+  M   + R IY+        
Sbjct: 145 RWKESVIISNDKLVFD--DEFKKENPIVAQRQMAE-YRA-DMNNLKNR-IYVFDQQVAQK 199

Query: 177 --NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-------QNDLNQQERIVYKST 227
             + L+L+++   L+      +K+L + K L ++  V        Q  LN  +R +  + 
Sbjct: 200 QQDLLELKSRVKNLQKGYGYARKELAITKPLADEGVVPRIELLKLQRQLNDTKRELTSTE 259

Query: 228 LELRENIHE-QKNMLRHINELYDEANLEFANYLKEISRDLEQNQR--TFADEMSKLT--- 281
           L++   I E Q+ +L  I+     A L+F +         EQ ++  T  D++S LT   
Sbjct: 260 LKIPVLISEAQETILNRID-----AALKFRS---------EQQEKLNTIQDKLSALTESQ 305

Query: 282 -ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
             L+    +  +LSP+ GTI      +     Q    L++IVP      I AK+ P+ I 
Sbjct: 306 VGLKDKVNRTVVLSPVTGTIKKIYINTVGGVIQPGMDLIEIVPTEDTLLIEAKIAPQDIA 365

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNL 381
            ++ G +A V+F  Y   R    K ++E I  D I  ++ N+ 
Sbjct: 366 FLRPGLSAIVKFSAYDFTRYGGLKGVLEFISADTIQDEEGNSF 408


>gi|86139952|ref|ZP_01058517.1| putative toxin secretion transmembrane protein [Roseobacter sp.
           MED193]
 gi|85823370|gb|EAQ43580.1| putative toxin secretion transmembrane protein [Roseobacter sp.
           MED193]
          Length = 442

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 86/443 (19%), Positives = 173/443 (39%), Gaps = 37/443 (8%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R H  +   M  L +  + G   W+    +  +V  SGE+  + ++  ++    GI+K  
Sbjct: 19  RGHVITGIFMAGLLVAAVFG---WAANSNLVSAVVVSGEVSVDRDLRVVQHRDGGIVKDI 75

Query: 71  QVENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            V  G  + +G  LL  +D   +    ++  K   +   +  ++ ++   +  +    + 
Sbjct: 76  PVSAGDHVRKGDILLRLDDTSASTERAILHGKIAELAIRKSRLEAQRDLHEEFSTPSGLD 135

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E        Q + ++G++     ++F   +SS  R       R   I L    +  +   
Sbjct: 136 EFIVSPAALQAI-YVGEH-----RIFEGNLSSFIR-------RKEQIDLGIEQVRTEIDG 182

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL-RENIH---EQKNMLRH 243
           L A L + Q ++     L +  +    DL++++  V      + REN+    E   +L  
Sbjct: 183 LEARLDAKQDEIL----LVQAESARVEDLSERQLTVRNVAFSIERENVRLRGEHGEILSA 238

Query: 244 INEL---YDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTREQKTILSPI 296
           +        E  LE  +  + +  D ++  R    ++S+LT    ++E T  +  I +PI
Sbjct: 239 LGRARSRVSELELEILSMQETLRTDAQRELREIETQLSELTEKRFVIEDTLSRTAIRAPI 298

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G I      S       ++ L  IVP        A+V    I+ V  G+ A +RF  + 
Sbjct: 299 SGLINDMNVNSVGGVISPAEILATIVPEEAELVFTARVPAASIEQVDTGHAARMRFVAFD 358

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLF 415
                + +  +  +    +   +     ++Y + + +T D        ELR G P EV  
Sbjct: 359 QNETPEIEGTVSYV--AAAATSDPQMPGDFYSIKVDVTPDQLARLGGKELRPGMPVEVYV 416

Query: 416 TAKNTTLAQEIIHPITDNWPKIF 438
           T    T    ++ P +D + + F
Sbjct: 417 TTAERTALSYLVKPFSDQFARAF 439


>gi|84515753|ref|ZP_01003114.1| type I secretion membrane fusion protein, HlyD family [Loktanella
           vestfoldensis SKA53]
 gi|84510195|gb|EAQ06651.1| type I secretion membrane fusion protein, HlyD family [Loktanella
           vestfoldensis SKA53]
          Length = 430

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 80/431 (18%), Positives = 182/431 (42%), Gaps = 37/431 (8%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           TL  ++G  G  TW++L  I  +V +SG+I  + N   ++ PF G++    V  G  +  
Sbjct: 17  TLAVLVG--GFGTWAVLAQINGAVITSGQIEVDRNRQVVQHPFGGVVTDILVVEGDTVAN 74

Query: 81  GTPLLTFE--DIET-TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD-VLEKAFESREE 136
           G  L+  +  D+++   +++ +   I   R  ++ E+   D     +D +L  A      
Sbjct: 75  GDLLIRLDPSDLQSELAIVEGQYFDILAHRARLEAERD--DAAALTFDPILRDAGTPAAA 132

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +L+           ++F   + +  +S+  +LT+ R+   +++     + +     +   
Sbjct: 133 ELM-------QGQERLFAARLETSLQSIH-QLTQQRAQIASQI-----TGITAQQTALQT 179

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVY--KSTLELRENIHEQKNMLRHINELYDEANLE 254
           +   + + L ++ ++    L Q  R++   +    L+  + E   M     E   E  ++
Sbjct: 180 QQRLITRELADQQSLLDRGLAQAGRVLALQREEASLQGRVGELTAMAAQAAERMTEIEIQ 239

Query: 255 ---FANYLKEIS----RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
               A+  +E +    RDL+ NQ   A+   + T+L +  ++  I +P++G +   Q F+
Sbjct: 240 VLGLASTRREQAISRLRDLQFNQLELAER--RQTLLRQL-DRLDIRAPVSGVVYAIQVFA 296

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             +  + + PL+ ++P  +   I  +V    I  V  G   T+RF  +   R  +    +
Sbjct: 297 PRSVIRPADPLLFLIPQDRPLIIATQVQSTDIDQVFVGQDVTLRFSAFDQRRTPELAGRV 356

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            ++        + +  Q YY   +++   ++     ++ L  G P E      + +    
Sbjct: 357 TRLS--ADAFADEVTGQSYYRAQVQVNAGEMRRLPIDLTLMPGMPVEAFMRTDDRSPMDY 414

Query: 426 IIHPITDNWPK 436
           +I P+ D + +
Sbjct: 415 LIKPLADYFTR 425


>gi|239995140|ref|ZP_04715664.1| HlyD family secretion protein [Alteromonas macleodii ATCC 27126]
          Length = 455

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 171/400 (42%), Gaps = 35/400 (8%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WS    I+      G+++    +  ++S   GI++   V  G  +  G  LL  +     
Sbjct: 62  WSYFAEIDEVAKGDGKVIPSQQLQVLQSYDGGIVQDILVREGQTVKAGQVLLKVDPTRFL 121

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ--LLDFLGK-YHSTCS 150
             ++        L   +    SAL     + DVL    E RE+   ++D   K Y+S  +
Sbjct: 122 SSLEENTTQFAALAAKVQ-RLSAL----TQGDVLRFNRELREQAPTIVDNERKLYNSNLA 176

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++      S  R ++    R + +   R +L    S  + +LS  +K+L + K L    A
Sbjct: 177 ELDEVAAGSDSRIMQ----RRQDVEEERANL----SQYQNVLSLSKKELAVTKPLLASGA 228

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNML-RHINELYDEANLEFANYLKEISRDLEQN 269
           VS+ ++ + ER +    +EL  NI + K  + R +N + +E   +    LK ++R   Q 
Sbjct: 229 VSEIEILRLERQI----VELEGNITKSKVAIERGLNAIEEEIIKKEEARLKLVNR-WNQE 283

Query: 270 QRTFADEMSKL----TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
                 EM+ L    T LE    Q  + SPI GT+      +          ++++VP  
Sbjct: 284 LTEATAEMATLQQSQTSLEDVVSQAALRSPINGTVQRLLINTIGGVITPGSAVVELVPQD 343

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQT 383
               + AKV+PK I  +++G  A ++F  Y         A ++ I  D I +++D     
Sbjct: 344 DQLIVEAKVSPKDIAFIREGQQAILKFSAYDFTIYGGMSAEVQHISADAITNEKD----- 398

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTL 422
           + YY V L+ T  + +D  +++  G   +V + T K T L
Sbjct: 399 ETYYLVRLE-TKKSIADEALDILPGMIVQVDILTGKKTVL 437


>gi|329849591|ref|ZP_08264437.1| protease secretion protein prtE [Asticcacaulis biprosthecum C19]
 gi|328841502|gb|EGF91072.1| protease secretion protein prtE [Asticcacaulis biprosthecum C19]
          Length = 432

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 82/431 (19%), Positives = 161/431 (37%), Gaps = 41/431 (9%)

Query: 10  KRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           K +HP +  R+  L  +G +GL I W  L P+   V +SG +  ++N   ++    GI++
Sbjct: 7   KLSHPRT--RLYGLICLGALGLLIVWGFLAPLAEGVVASGNLSVDNNRKAVQHLEGGIVR 64

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK----- 123
              V  GS + +G  +L  +DI      D     +  L       +S   FL  +     
Sbjct: 65  AVAVREGSTVKEGDVILELDDINARAQRDQAAQDVAALLLAQARLES---FLAGQPQIRF 121

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            DV     +   E  L    + H     VF      +  S  +  +R  ++  N      
Sbjct: 122 VDVTALRLDPGVEADL----RRHQ--QDVFVQQTRWLSASAGLIRSRQGAVLSNSASKAA 175

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + + +   L++ + +LT+ ++L EK  V  + +             LR+ +  Q+  L  
Sbjct: 176 QIAAMEDGLAAARSELTLAESLLEKRLVRLDHVQG-----------LRQRVAAQEADLAR 224

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSK-----------LTILEKTREQKTI 292
           +     +  ++ A Y  E++       R  ++E+ K           L   E    +  +
Sbjct: 225 LKAEKTQGGVDAAVYDMELAESRAMVFRDASNELVKVKTDLLSTQERLAAAEGVFARSLV 284

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P +GT++   + +     Q  + LM+IVP ++      +VTP     + +G    V+ 
Sbjct: 285 RAPRSGTVLNLAATTVGGVVQPGETLMEIVPDNEKLIATVRVTPNDRDSIYEGQDVKVQI 344

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             +      +    +  +   +           YYE  + +         + +R G P E
Sbjct: 345 TAFQSWLTPRLSGKLMGVSADLKTVKET--GASYYEARIILNGEDVKQKGLRIRAGMPVE 402

Query: 413 VLFTAKNTTLA 423
              ++  T  A
Sbjct: 403 AFISSGQTRTA 413


>gi|269104723|ref|ZP_06157419.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161363|gb|EEZ39860.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 464

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 83/403 (20%), Positives = 169/403 (41%), Gaps = 43/403 (10%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + ++  I    W+ +  ++   +  G+++    +  +++   GI+K+  
Sbjct: 26  NTPTSARILLWVILLFFIVAFAWASVAKLDKVTTGIGKVIPSSQLQVVQNLEGGIVKQVM 85

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G  + +G  LL  +D         K  S+  L+  I      L  +      ++K+ 
Sbjct: 86  VREGEHVTKGQKLLLIDDTLFQSDYKEKDQSVAGLQADIIRFNGLLASIK-----VDKSQ 140

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVY-RSLKMKLTRMRSIYLNRL-DLENKSSLLR 189
            S++ Q         +   K      +S Y +S   K+ R ++ Y + + +LEN+ S++ 
Sbjct: 141 ASKDWQ--------KTVVIKPAQLAFTSEYKKSHPDKVRRQQNEYRDNISNLENQLSVVA 192

Query: 190 ALLSSHQKDLT----MMKNLFEKNAVSQNDLN-----QQERIVYK-STLELRENIHEQKN 239
             +S  Q++LT     + NL     ++  + N       E +V K   L+L+ ++++ K 
Sbjct: 193 QQISQKQRELTENQSRIANLQRSYNIALKEYNITKPLADEGVVPKIELLKLQRSLNDTKR 252

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L               EA  ++ +   +   D++      +D++S +      LE   +
Sbjct: 253 DLTSARLQAPVAKSAIKEATFKYMDIALQFRSDIQSKLNDTSDQLSSMNETRIGLEDRVK 312

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + T++SP+ GTI      +     Q    L++IVP      I AK+ P+ I  ++ G  A
Sbjct: 313 RTTVVSPVTGTIQKIYVNTVGGVIQPGMNLIEIVPTEDTLLIEAKIAPQDIGFLRPGLKA 372

Query: 349 TVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEV 389
            V+F  Y          ++E I  D I  ++ N+     +Y+V
Sbjct: 373 IVKFTAYDFTSYGGLDGVVETISADTIQDKEGNS-----FYQV 410


>gi|227884768|ref|ZP_04002573.1| type I secretion membrane fusion protein [Escherichia coli 83972]
 gi|300984116|ref|ZP_07176869.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 45-1]
 gi|301045857|ref|ZP_07193044.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 185-1]
 gi|227838249|gb|EEJ48715.1| type I secretion membrane fusion protein [Escherichia coli 83972]
 gi|300302107|gb|EFJ58492.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 185-1]
 gi|300408428|gb|EFJ91966.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 45-1]
 gi|307552148|gb|ADN44923.1| HlyD family secretion protein [Escherichia coli ABU 83972]
 gi|315293000|gb|EFU52352.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 153-1]
 gi|315300058|gb|EFU59296.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 16-3]
          Length = 415

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 81/428 (18%), Positives = 168/428 (39%), Gaps = 78/428 (18%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEIL--NEDNVVEIKSPFSGIIKKFQVENGSQ 77
           M +  ++ ++  + W+   P++      G I+  + + V++   P  GI+K  +V  G  
Sbjct: 41  MVIFLLVLVVTFVIWAWNSPLDEVTRGQGSIIPGSREQVIQTLDP--GILKTLEVREGDI 98

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFE 132
           + +G  LLT +D  ++ ++   +  + NL     R   +    +L F ++    +     
Sbjct: 99  VEKGQVLLTLDDTRSSAMLRESEARVNNLEAVRARLRAEAYSESLTFPDD----VPADLR 154

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            RE                      S+VYR  K +L   +SI      L+   +LL    
Sbjct: 155 ERE----------------------STVYRLRKTELA--QSIA----GLKQSKALL---- 182

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
               K++ M + +  + A+S+ +L + +R     + EL+  + E++N             
Sbjct: 183 ---DKEIAMTRPIVREGAMSEVELLRMQR----QSAELQLQMDEKQN------------- 222

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                YL E   +L + +   A     +       E+  I +P+ G +   +  +     
Sbjct: 223 ----KYLTEAGAELVKTEAELAQAKENMAGRADPVERSRIRAPLRGIVKNIRVNTLGGVV 278

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              Q +M+I+P      I A + P+ + +V+ G  A V+   Y          ++  + P
Sbjct: 279 SAGQDIMEIIPLEDQLLIEAYINPRDVAYVRTGMPALVKLTAYDYAIYGGLDGVVTLVSP 338

Query: 373 II---SQQDNNLQ---TQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLA 423
                 ++  +L+    + YY V++  ++   +D N   + +  G  A V       ++ 
Sbjct: 339 DTLRDQKRPGDLKLDPNEAYYRVLVTTSNNYLTDRNGKILPVIPGMIASVDIKTGQKSVF 398

Query: 424 QEIIHPIT 431
           Q +I PIT
Sbjct: 399 QYLIKPIT 406


>gi|209550553|ref|YP_002282470.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209536309|gb|ACI56244.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 435

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 87/447 (19%), Positives = 179/447 (40%), Gaps = 61/447 (13%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +LSI  + G+  W+    +  +V   G ++   +V +++    GI+ K  V     + 
Sbjct: 19  VGVLSIALVCGIGGWAATTELSSAVIGEGVVVVNGDVKKVQHLTGGIVSKLLVSENDHVT 78

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            G  L+  +   T   + + + ++  L   R  +  E+  +D     +DV        EE
Sbjct: 79  AGQILIQLDGTTTKAQLSIVESTLAQLYARRARLKAER--IDA--ESFDV--------EE 126

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRAL--- 191
            + D      ST ++    G + ++ S +  L  M+S   +R D   E    L+  +   
Sbjct: 127 NISDL---TSSTAARDLLDGETKLFDSRRSALVGMKSQLASRKDQLAEQIKGLVVQINAT 183

Query: 192 ---LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML------- 241
              LS  +++L  +  L++K  V+   LN  +R    +  +L+ N  ++           
Sbjct: 184 NDSLSLIEQELEGVDTLYKKGLVTLQRLNALKR----ARADLQGNSGQEIAAKAEAEGKA 239

Query: 242 ----RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               R   +L ++   E A  L ++   + +N+      + +L  L+       I++P++
Sbjct: 240 IEIDRQSLQLDEDRRSEIAKELTDVEAKIAENEERRGTALDQLRRLD-------IVAPLS 292

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I      + +      + LM +VP ++   ++A+V  + I  +  G +  VRF  +  
Sbjct: 293 GRIHELSIHTVNGVVNPGETLMLVVPENEDLTVQARVATRDIDQLHVGQSVDVRFSAFDQ 352

Query: 358 IREKKFKAIIEKIDPIISQQDNN------LQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
                 +  I  I P + + +        L+ +   E I K+        +I+L  G PA
Sbjct: 353 RTTPDVRGEITSIAPDVVKDERTGISYYPLRVKPEAESIAKL-------KSIKLYPGMPA 405

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIF 438
           EV     +  +   +  P+TD    +F
Sbjct: 406 EVFIKIADRNVISYLTKPLTDQMQHVF 432


>gi|262274867|ref|ZP_06052678.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Grimontia hollisae CIP 101886]
 gi|262221430|gb|EEY72744.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Grimontia hollisae CIP 101886]
          Length = 460

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 145/370 (39%), Gaps = 28/370 (7%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           + +ITW+    ++      G+++    V  I+S   GI++   V+ G  + QG PL   +
Sbjct: 40  VAIITWAAFASLDRVTRGEGKVIPSSQVQLIQSLDGGILQAMYVQEGQLVKQGEPLARID 99

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL------LDFL 142
           D         ++  + +LR +I   +S L  +      L  A  +  EQ+      L+F 
Sbjct: 100 DTRFRSDFAQQEEEVSSLRANIIRMRSELRSIK-----LSPAAPNWREQIAITLSPLEFP 154

Query: 143 GKYHSTCSKVFNYGISSVYRS----LKMKLTRM-RSIYLNRLDLENKSSLLRALLSSH-- 195
            +   +   +   G    Y      LK +L  + R I   + + +   S +R L +S   
Sbjct: 155 SELEESEPALIE-GQRQEYEGRLLDLKNRLEILARQILQKQQESQEVESKIRTLSNSFGL 213

Query: 196 -QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            +++L +   L  K  VS+ DL + ER V     +L+  +   + M   I    DEA L+
Sbjct: 214 IKRELKITIPLARKGIVSEIDLLKLERQVN----DLKGELSSLRLMQPKIKASVDEAILK 269

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK----TILSPIAGTIVYNQSFSSSN 310
                   S +           +S+LT  +   + K     I +P+ GTI      +   
Sbjct: 270 RREAALAFSNETRAKMSELETRLSRLTQAQVGAQDKVDKAVITAPVTGTIKTIHINTLGG 329

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q    L++IVP      I AK+ PK I  +  G  + V+   Y   R       +E I
Sbjct: 330 VVQPGIDLIEIVPAEDQLLIEAKIAPKDIAFLHAGLPSVVKVTAYDFTRYGGLNGTLEHI 389

Query: 371 DPIISQQDNN 380
               +Q +  
Sbjct: 390 SADTTQDEEG 399


>gi|332289296|ref|YP_004420148.1| p-hydroxybenzoic acid efflux subunit AaeA [Gallibacterium anatis
           UMN179]
 gi|330432192|gb|AEC17251.1| p-hydroxybenzoic acid efflux subunit AaeA [Gallibacterium anatis
           UMN179]
          Length = 446

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 92/429 (21%), Positives = 158/429 (36%), Gaps = 67/429 (15%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           H  S   + LL    ++ LI WS    IE      G I+       I+S   GI+ K  V
Sbjct: 66  HTGSFAMIWLLGAFLVVFLI-WSYFSKIEEVTRGQGTIIPNSREQIIQSLDPGILDKMMV 124

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  + +G  LL  +D  ++ ++   +  + NL                          
Sbjct: 125 REGDLVEKGQVLLKLDDTRSSAILRETQAKVDNL-------------------------- 158

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              E +   L    S  + VF   I    +  +M++ + +     +  LE     LR   
Sbjct: 159 ---EAITTRLKAEISGQTPVFPEKIPQEIKDREMEVYKAK-----KQALEEAVKTLRDSK 210

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +    ++ + + +  K AVSQ +L + +R      L++ E  H      ++I +      
Sbjct: 211 AYLDSEIALTEPMVAKGAVSQVELLRMKRSANDMALQISEREH------KYITD------ 258

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNY 311
               N L  +  DL+Q +   A     +       E+  I +P+ G IV N   ++    
Sbjct: 259 --AGNELVRVQGDLDQAKENLAARADPV-------ERSLIRAPLKG-IVKNIRINTIGGV 308

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               Q +M+IVP      + A + PK + +++ G  A V+   Y          I+  + 
Sbjct: 309 ISAGQDIMEIVPVEDNLLVEAYINPKDVAYIRPGMKAVVKLTAYDYAIYGGLDGIVTLLS 368

Query: 372 PIISQ-----QDNNLQ-TQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTL 422
           P   Q      D NL     +Y V++K      +D N   + +  G  A V       T+
Sbjct: 369 PSTLQDKRQPSDLNLNPNNSFYRVLVKTNGSHLTDKNGHELPVLPGMIATVDIKTGEKTV 428

Query: 423 AQEIIHPIT 431
            Q +I PIT
Sbjct: 429 FQYLIKPIT 437


>gi|26246260|ref|NP_752299.1| putative membrane spanning export protein [Escherichia coli CFT073]
 gi|26106658|gb|AAN78843.1|AE016756_26 Putative membrane spanning export protein [Escherichia coli CFT073]
          Length = 420

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 81/428 (18%), Positives = 168/428 (39%), Gaps = 78/428 (18%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEIL--NEDNVVEIKSPFSGIIKKFQVENGSQ 77
           M +  ++ ++  + W+   P++      G I+  + + V++   P  GI+K  +V  G  
Sbjct: 46  MVIFLLVLVVTFVIWAWNSPLDEVTRGQGSIIPGSREQVIQTLDP--GILKTLEVREGDI 103

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFE 132
           + +G  LLT +D  ++ ++   +  + NL     R   +    +L F ++    +     
Sbjct: 104 VEKGQVLLTLDDTRSSAMLRESEARVNNLEAVRARLRAEAYSESLTFPDD----VPADLR 159

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            RE                      S+VYR  K +L   +SI      L+   +LL    
Sbjct: 160 ERE----------------------STVYRLRKTELA--QSIA----GLKQSKALL---- 187

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
               K++ M + +  + A+S+ +L + +R     + EL+  + E++N             
Sbjct: 188 ---DKEIAMTRPIVREGAMSEVELLRMQR----QSAELQLQMDEKQN------------- 227

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                YL E   +L + +   A     +       E+  I +P+ G +   +  +     
Sbjct: 228 ----KYLTEAGAELVKTEAELAQAKENMAGRADPVERSRIRAPLRGIVKNIRVNTLGGVV 283

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              Q +M+I+P      I A + P+ + +V+ G  A V+   Y          ++  + P
Sbjct: 284 SAGQDIMEIIPLEDQLLIEAYINPRDVAYVRTGMPALVKLTAYDYAIYGGLDGVVTLVSP 343

Query: 373 II---SQQDNNLQ---TQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLA 423
                 ++  +L+    + YY V++  ++   +D N   + +  G  A V       ++ 
Sbjct: 344 DTLRDQKRPGDLKLDPNEAYYRVLVTTSNNYLTDRNGKILPVIPGMIASVDIKTGQKSVF 403

Query: 424 QEIIHPIT 431
           Q +I PIT
Sbjct: 404 QYLIKPIT 411


>gi|4019202|gb|AAC97198.1| SapE [Campylobacter fetus]
          Length = 427

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 81/428 (18%), Positives = 173/428 (40%), Gaps = 31/428 (7%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L ++GI G+  W    P+  +  + G++    N   ++    G++ K  V++G  + +G
Sbjct: 17  ILLLVGIFGV--WMGTAPLNSAAVAPGQVGVLSNKKVVQHLEGGVVDKIYVKDGDVVKKG 74

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L+  +++     +D+    +K+         S L+   +  D +E  F +  +   DF
Sbjct: 75  QVLIEIKNVRLNSELDI----VKSEYLQTSVLVSRLEAQRDDKDQIE--FNNDVKSYPDF 128

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKDLT 200
                 + SK    G  S++      L    +I   R+D L  +   + A++ + ++ + 
Sbjct: 129 -----ESASK----GQISIFNEQNKLLKDEITILNQRIDQLRKQIEGINAIVDAKKQRVE 179

Query: 201 MM-------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
            +       + LF++    +  L   +R    +  E+   I +   +   I E   +   
Sbjct: 180 SLNEETKEWERLFKEQLTDKIRLRDIQRERTAAGGEIASGISDIAKLNVQITETKQQILF 239

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               + +++ +  E+ +    D  ++L  L+  +E+  + +P+ G +V   + +     +
Sbjct: 240 RERTFKEDVLKKYEEAKLKLTDLSARLRALDDQQERALVKAPVDGIVVELATHTIGGVVR 299

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             + +M IVP      + AK+    I  V  G  A +RF  +     K    I  ++  +
Sbjct: 300 PGESIMSIVPDDSDYIMEAKMHITDIDKVYVGLPADIRFSAF---NSKTAHVIEGEVTYV 356

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSD---NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +    +     YYE+  K+T     +   N   L  G PAE++      T+   II P 
Sbjct: 357 SADTLKDSHGNPYYEIKAKLTKKGIEEVKKNGFFLVPGMPAEIIVKTGERTVLSYIIKPF 416

Query: 431 TDNWPKIF 438
           TD + + F
Sbjct: 417 TDMFQRAF 424


>gi|304393446|ref|ZP_07375374.1| putative alkaline protease secretion protein AprE [Ahrensia sp.
           R2A130]
 gi|303294453|gb|EFL88825.1| putative alkaline protease secretion protein AprE [Ahrensia sp.
           R2A130]
          Length = 472

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 1/85 (1%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           W+        S+ R  L+ + G +GL + W+   PI  +V +SG+I++      I+ P  
Sbjct: 34  WRKQVPTANGSIVRKGLIFVFGFLGLFVIWAFAFPIASAVVASGKIVSSGQNKLIQHPTG 93

Query: 65  GIIKKFQVENGSQILQGTPLLTFED 89
           G+++   V++GSQ+ +G  LL  +D
Sbjct: 94  GVVRSISVQDGSQVAKGDVLLVLDD 118


>gi|237729714|ref|ZP_04560195.1| HlyD family secretion protein [Citrobacter sp. 30_2]
 gi|226908320|gb|EEH94238.1| HlyD family secretion protein [Citrobacter sp. 30_2]
          Length = 457

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/338 (18%), Positives = 135/338 (39%), Gaps = 11/338 (3%)

Query: 19  RMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+TL  I+ ++ L   W+    I+      G+ +    + +I++   GI+ +  V  G  
Sbjct: 45  RLTLWVILALVALSFIWAGFAKIDEVTRGEGKAIPSSKLQKIQNLEGGIVTELYVHEGQI 104

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  GTPLL  +D      +   +     LR  ++   + ++   N+  V+     S+  +
Sbjct: 105 VNAGTPLLHLDDTRFASNVGETEADKLGLRAKVERLTAEVE---NRDFVISPEIASQAPE 161

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +     + +++  + F+  IS +   L  K   +R       D E+K    +  L   ++
Sbjct: 162 VARGETELYNSRREQFHNEISGLEEQLVQKKQELR-------DFESKEDQFKHSLGLIRQ 214

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++ M + L    A+S+ +L +  R   ++  +L             I E+ ++       
Sbjct: 215 EIKMSEPLLASGAISKVELLRLRRTEVETAGQLNSISLSLPKATSEIKEIENKIGESRGR 274

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  +    L + +   +   + +  LE    +  + SP+ G +      +     Q    
Sbjct: 275 FQSDALAQLNEARTNLSKTQASVKALEDRVNRTMVTSPVRGIVQQVMVNTIGGVIQPGSD 334

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           L++IVP      I AK+ P+ I  +  G  A V+F  Y
Sbjct: 335 LVEIVPLDDKLLIEAKIQPRDIAFLHPGQHAMVKFTAY 372


>gi|163850592|ref|YP_001638635.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium extorquens PA1]
 gi|163662197|gb|ABY29564.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens PA1]
          Length = 460

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 79/430 (18%), Positives = 186/430 (43%), Gaps = 33/430 (7%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           + +  G+ G   W+  + ++ +V S+G I+ E +   ++    G+++   V++G  +  G
Sbjct: 48  IAAAFGVAG--AWAATVRLDRAVISTGVIVAETSRKVVQHFEGGMVQAVLVKDGQTVRSG 105

Query: 82  TPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             LL  + +++    DL +  +     L   +  E++  D L    D+   A    E  L
Sbjct: 106 DVLLRIDPLQSQASADLFRNQLDAALVLEARLRAEQAQSDDLQLPADI---AARRNEPAL 162

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS----IYLNRLDLENKSSLLRALLSS 194
              +G      ++     +      ++ K+T++R+    + + +  +E +   +R     
Sbjct: 163 ARMIGDQAGQLAERRTT-LKGQLALIEAKVTQLRTEISGLAVEKSSVEQQVGFIR----- 216

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYDEAN 252
             ++L  +++L E+N +  + L   ER   ++ LE  +  ++ E+      I+E   +  
Sbjct: 217 --QELEGLRSLHERNLIPLSRLLVMER--ERTRLEGVIGRSVAERAKAENAISEAGLQVT 272

Query: 253 LEFANYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +    L+E ++  L + ++   +   KL + +    +  I +   G I   + F+    
Sbjct: 273 -QLKQKLQEAVTGQLVETRQRIGELREKLVVAQDVFRRHEIRASHDGVIQGLKVFAIGQV 331

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +  +PLM+IVP +    +  + +P  ++ V  G  A ++FP +   + ++  A+   + 
Sbjct: 332 VRSGEPLMEIVPTADRLVVNVQFSPNDLEAVHAGMRAEIKFPTF---QARRTPAVFGTLT 388

Query: 372 PIISQQD--NNLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            ++S+    +    Q Y+   ++I +    ++    L  G PAEV+ +A   T  + +  
Sbjct: 389 -VVSRDRLVDEGSKQAYFAGTVEIDEHQLPAEVRHRLLAGLPAEVVVSAGERTALEYLFA 447

Query: 429 PITDNWPKIF 438
           P  D   + F
Sbjct: 448 PFFDAMGRAF 457


>gi|91776787|ref|YP_546543.1| Type I secretion membrane fusion protein, HlyD [Methylobacillus
           flagellatus KT]
 gi|91710774|gb|ABE50702.1| Type I secretion membrane fusion protein, HlyD [Methylobacillus
           flagellatus KT]
          Length = 428

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/365 (18%), Positives = 142/365 (38%), Gaps = 41/365 (11%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W   + N     +   L+S+  +  LITW+ L  +++ V + G ++       ++    G
Sbjct: 3   WLRRQWNAMTPSRAFVLISVFAVAALITWAALAQVDLIVRTVGRVVPAGKAQIVQHLEGG 62

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I++   V+ G  +  G PL+   DI+               R  +  E++  D L  +  
Sbjct: 63  IVRTLLVQEGEIVKAGQPLIELSDIKA--------------RSDLGQERTKRDALRGREA 108

Query: 126 VLEKAFESREEQLLDFLGKYHS-----TCSKVFNYGISSV---YRSLKMKLTRMRSIYLN 177
            L    E+R +  ++F    H        S      +SSV    R L+ +  + R     
Sbjct: 109 RL--LAEARGKTSIEFPADLHDAEVKQAESAALRARLSSVNEESRVLRDQSAQRRGEI-- 164

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN---- 233
             ++E +   L + +   ++   +++ L +  A S+ +L   E  + +   +LRE     
Sbjct: 165 -AEIETRRKNLVSEIELARQQHALIEGLNKNGAASRMELLDAESRLQRLESQLREAEAAL 223

Query: 234 ---IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                 Q  +   I EL+     +    L ++  +L+++   F     +L       E+ 
Sbjct: 224 PRLKAAQAEIESKIAELWARFRADATAQLTDVRAELQRSTLEFETNADRL-------ERN 276

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P+AG I      +     +  +PL++I P  +   +  +  P    +++ G  A V
Sbjct: 277 IVRAPMAGFINRMMLSTVGGVIRPGEPLLEITPEDEHIVVETRARPDDRANLRNGLPARV 336

Query: 351 RFPHY 355
           R   +
Sbjct: 337 RIGAF 341


>gi|149190741|ref|ZP_01869007.1| putative RTX transport protein [Vibrio shilonii AK1]
 gi|148835397|gb|EDL52368.1| putative RTX transport protein [Vibrio shilonii AK1]
          Length = 442

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 90/421 (21%), Positives = 180/421 (42%), Gaps = 51/421 (12%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           IIG  +W+ L   +  V   G ++   +V  I+S   G+I+   V  G  +++G PL   
Sbjct: 31  IIGWASWATL---DEVVVGEGSVVPSQSVQTIQSLEGGLIENILVRQGDSVIKGQPLAIL 87

Query: 88  EDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           +D        E+    D    S+   R  ++ E +++   N + D        ++  +  
Sbjct: 88  DDTRFRASFQESGKQFD----SLAAQRVRLEAELASVKVDNQQSDW------QKQVTVTP 137

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS-------SLLRALLS 193
           F    + T S       ++ Y  L+  ++ +     ++L +E ++       S +R L S
Sbjct: 138 FDIVTNDTSSAALFNAKANYYERLEQVISELEE---SKLRIEQQAQAVSDTQSSIRTLQS 194

Query: 194 S---HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-NIHEQKNMLRHINELYD 249
           S    +K+  ++K++ E  AV++ +L +  R V +   +L    +  QK    +   + D
Sbjct: 195 SLAIVKKERDLLKSVVESGAVAEVELLKLNRDVIRLEGDLSSAKVSAQKQRAAYAEAIAD 254

Query: 250 EANLEFANYLKEISRDLEQNQRTFAD-EMSKLTILEKTREQKTILSPIAGTI--VYNQSF 306
              +   NY  +    L +   T A  + S+  I ++ R  + I SP+  T+  V+ ++ 
Sbjct: 255 HRGIAL-NYRTKAQGQLNEISATIAQLKESRQAIADQLRRTQ-IESPVDATVKEVFVRTI 312

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                 +  +P+M++VP +    + AK+ PK I  +  G  ATV+F  Y  +     K  
Sbjct: 313 --GGVVRPGEPIMELVPKNSGLIVEAKIAPKDIAFISVGLEATVKFSAYDFVIYGGQKGK 370

Query: 367 IEKIDPIISQQDNNLQTQE---YYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTL 422
           +  +        + LQT++   YY   +++   A  + +  +  G  A V + T + T L
Sbjct: 371 VTYVSA------DALQTEDGAAYYRAHIELDQQALEEKSFTVIPGMQAAVDILTGEKTVL 424

Query: 423 A 423
           +
Sbjct: 425 S 425


>gi|186682213|ref|YP_001865409.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186464665|gb|ACC80466.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 480

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 25/260 (9%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +T +  + ++GL+ WS+   I I+V+  G ++    VV  +SP SG I    V  G ++ 
Sbjct: 39  LTAMGSLIVVGLV-WSVFGRIPITVAGQGVVVFPSKVVGFQSPSSGQILMLFVRTGDEVK 97

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L T +  E  D + L +V +  L+   D   ++L     +  VL+K    ++ Q L
Sbjct: 98  KGQVLATIDQTELQDKLKLARVKLAQLQEQ-DQNANSLQL---QRTVLDKGAIGQQRQAL 153

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             L    +T S      ++ + RS  ++     SI   R +L+ +    R L+ + ++  
Sbjct: 154 --LQTLKTTQS------LTPILRSKGLE-----SIRQERQNLQEQLQTTRDLMPTFKERF 200

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---A 256
            + + L E+ AVS + + Q ++    S    +  I+E ++ L+ +N    +A  EF    
Sbjct: 201 DIRQKLREEGAVSSDTVLQAQQEFLNS----KTKINEIESQLKQLNVKEADAEREFLANI 256

Query: 257 NYLKEISRDLEQNQRTFADE 276
           N  KE+   L      FA +
Sbjct: 257 NSTKELQAQLAVLDSKFAGQ 276


>gi|297171415|gb|ADI22417.1| membrane-fusion protein [uncultured Rhodospirillales bacterium
           HF0500_02H05]
          Length = 460

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 83/184 (45%), Gaps = 7/184 (3%)

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  +I+ ++++ Q  F D   ++   +   ++  + +P AGT+   Q  +       ++P
Sbjct: 278 WQSDIATEIQEAQLAFNDVTQRIRASQDVLDRLEVKAPQAGTVSNIQIRTPGGVISPAEP 337

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +M I+P  +   I A++  + I  V+ G  A +R   Y+   +++   ++ ++  +   Q
Sbjct: 338 IMDIIPEDEPLVIEARINRQDIDSVQVGSKAQIRLTAYS---QRRLAPLMGEVRYVAPDQ 394

Query: 378 DNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
             + Q    Y ++    D   LA  D +I+LR G PA +L           ++ PI  + 
Sbjct: 395 TVDEQRDSSYYIVRAAIDPKELAKHD-DIKLRPGMPANILVLKTPRKAIDYLVDPIVQSM 453

Query: 435 PKIF 438
            K F
Sbjct: 454 DKAF 457


>gi|299533567|ref|ZP_07046943.1| type I secretion membrane fusion protein, HlyD [Comamonas
           testosteroni S44]
 gi|298718473|gb|EFI59454.1| type I secretion membrane fusion protein, HlyD [Comamonas
           testosteroni S44]
          Length = 470

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 77/403 (19%), Positives = 159/403 (39%), Gaps = 25/403 (6%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ L  I+  V   G+++    V  ++S   GI+K+  V  G  + QG  +L  +    +
Sbjct: 76  WACLGRIDEVVRGQGKVVPSRQVQVVQSLDGGIVKEILVHPGEHVEQGQVILRIDPTRYS 135

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE------QLLDFLGKYHS 147
             +   K  +  L+     + + L  L +      + F++ E+      QL++   +   
Sbjct: 136 SSLGENKAELLALKA----KAARLQALASG-----EPFKAPEDVQALAPQLVEMERRMWE 186

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + S+  N  ++     L+ +   +R    NR    +  SL         ++L++ + L +
Sbjct: 187 SRSQELNTNVNIARDQLRQRQQELRETQANRDQASSSCSLT-------SEELSVTRPLLK 239

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             AVS+ DL + +R V +   E +    +   +   I E   +      N   +   +L 
Sbjct: 240 SGAVSEVDLLRLQRDVARFCGEAKAAGAQIGRIQAAIQEAERKIQESELNMRNQSRSELS 299

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + Q            LE   +   + +P+ GT+    + +     Q  + ++ IVP    
Sbjct: 300 ETQAKLGTLEQGKVALEDRVKLAEVRAPVRGTVNTLMANTVGGVVQPGKDILDIVPLDDT 359

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +  ++ P+ I  +  G  A V+F  Y D     +  +  K++ I +    + +   +Y
Sbjct: 360 LLMEVQINPRDIGFLHFGQQAEVKFTAY-DF--AIYGGLQGKLEQIGANTVTDEKGNSFY 416

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            V ++       D++  +  G  AEV       TL Q ++ PI
Sbjct: 417 VVKVRTEKAHVGDDSRPIIPGMQAEVHILTGKRTLMQYLLKPI 459


>gi|77456364|ref|YP_345869.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           fluorescens Pf0-1]
 gi|77380367|gb|ABA71880.1| HylD like membrane fusion protein component of ABC transporter
           required for LapA secretion [Pseudomonas fluorescens
           Pf0-1]
          Length = 455

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 93/436 (21%), Positives = 173/436 (39%), Gaps = 57/436 (13%)

Query: 19  RMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+T+ +IIG  + L+ W+    I+      G+ +    + +I++   GI+ +  V+ G  
Sbjct: 42  RLTIWAIIGFFVFLMLWANFAVIDEVTKGDGKAIPSSKIQKIQNLEGGIVSELFVKEGQI 101

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD--FLNNKYDVL-------- 127
           +  G PL+  +D      +   +    ++   ++   + +D   LN   DVL        
Sbjct: 102 VEAGAPLVRLDDTRFASNVGETEADRLSMLLRVERLSAEVDDRPLNFPEDVLKAVPGQAK 161

Query: 128 --EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             E  + SR +QL D +G                + R  +++            +  +K 
Sbjct: 162 SEESLYISRRQQLHDEVGGLQEQL----------IQRQQELR------------EFTSKQ 199

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI-------VYKSTLELRENIHEQK 238
           +  R  L   ++++ M + L  + AVS  ++ + +R        +  +TL +       K
Sbjct: 200 AQYRQQLGLQRQEINMSEPLVAQGAVSPVEVLRLKRAEVETRGQLDATTLAIPRAESAIK 259

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            + R I+E   +   E    L E   DL + Q T          LE    +  + SP+ G
Sbjct: 260 EVQRKIDETRGKFRSEALTQLNEARTDLNKAQATG-------KALEDRVSRTLVTSPVRG 312

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +      +     Q    L++IVP      + AK+ P+ I  +  G  ATV+F  Y   
Sbjct: 313 IVNKMLVNTIGGVIQPGSDLLEIVPLDDTLLVEAKIRPQDIAFLHPGQEATVKFTAYDYT 372

Query: 359 REKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEV-L 414
                KA +E+I    I+ +D       YY + L+   + L   +  + +  G  A V +
Sbjct: 373 IYGGLKAKLEQIGADTITDEDKKTT---YYVIKLRTERSHLGTDEKPLLIIPGMVASVDI 429

Query: 415 FTAKNTTLAQEIIHPI 430
            T K T L+  ++ PI
Sbjct: 430 ITGKKTVLSY-LLKPI 444


>gi|87303270|ref|ZP_01086063.1| possible effux transporter [Synechococcus sp. WH 5701]
 gi|87282165|gb|EAQ74126.1| possible effux transporter [Synechococcus sp. WH 5701]
          Length = 479

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 78/360 (21%), Positives = 152/360 (42%), Gaps = 63/360 (17%)

Query: 9   LKRNHPAS-LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L R+H AS L   TL+S IGI+  + W+ + P+ ++V+  G++     V  +++P  G+I
Sbjct: 76  LGRSHRASGLIAWTLVSSIGIV--VVWAAVAPLSVAVAVQGKLQPGSKVKLVQAPVPGVI 133

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V+ G  + +G  L+ F         DL++V+ K     +   ++    L N+  +L
Sbjct: 134 DALLVKEGETVRKGQSLVRF---------DLREVTSK-----LAAAEAIRTRLRNENQIL 179

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
             +   R    L        T ++       SV  S + ++   + +  N+  ++     
Sbjct: 180 AASLGDRPATGL--------TANQQLQLENRSVDLSSRRQIAE-QELRANQARIDG---- 226

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQ----------NDLNQQERIVYKSTLELRENIHEQ 237
           LR  L++ +  L    +L    AVS+          NDLN    +  +++ +LR  +   
Sbjct: 227 LRTSLATAENILGRFDSLARSGAVSELQLLEARSRVNDLNASLAVELETSAKLRAGV--- 283

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                        AN   A+   ++   +E N R  AD   ++ +  + + Q ++L+  +
Sbjct: 284 -------------AN-SVASPGADLRSQVEANLRQIADLTQQIDV-ARVQLQYSVLTAPS 328

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV-TPK-QIQHVKKGYTATVRFPHY 355
              V++   +  +    + PL+K+VP   L    AKV  P   I +++ G  A +    Y
Sbjct: 329 DGAVFDIDVAPGSVVNTTTPLLKVVPADAL---EAKVFIPNTAIGYLRPGQRADISLDTY 385


>gi|10955285|ref|NP_052626.1| hemolysin D [Escherichia coli O157:H7 str. Sakai]
 gi|75994496|ref|YP_325610.1| hemolysin transport protein [Escherichia coli O157:H7 EDL933]
 gi|149930761|ref|YP_001294702.1| w0038 [Escherichia coli]
 gi|168762998|ref|ZP_02788005.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4501]
 gi|168789923|ref|ZP_02814930.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC869]
 gi|168802571|ref|ZP_02827578.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC508]
 gi|217329901|ref|ZP_03445976.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           TW14588]
 gi|226200964|ref|YP_002756568.1| hemolysin transport protein [Escherichia coli]
 gi|260718955|ref|YP_003225096.1| hemolysin D [Escherichia coli O103:H2 str. 12009]
 gi|260763806|ref|YP_003237845.1| hemolysin D [Escherichia coli O26:H11 str. 11368]
 gi|261225652|ref|ZP_05939933.1| hemolysin transport protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261257893|ref|ZP_05950426.1| hemolysin D [Escherichia coli O157:H7 str. FRIK966]
 gi|284000232|ref|YP_003377919.1| hemolysin D [Escherichia coli O26:H-]
 gi|37695749|gb|AAR00411.1|AF401292_12 w0038 [Escherichia coli]
 gi|3337017|dbj|BAA31776.1| Hemolysin D [Escherichia coli O157:H7 str. Sakai]
 gi|3822164|gb|AAC70118.1| hemolysin transport protein [Escherichia coli O157:H7]
 gi|118201518|gb|ABK79667.1| hemolysin transport protein [Escherichia coli O157:H7]
 gi|189366728|gb|EDU85144.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4501]
 gi|189370563|gb|EDU88979.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC869]
 gi|189375464|gb|EDU93880.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC508]
 gi|217317132|gb|EEC25565.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           TW14588]
 gi|219881593|gb|ACL51963.1| hemolysin transport protein [Escherichia coli]
 gi|238801611|gb|ACR56509.1| hemolysin D [Escherichia coli]
 gi|257757231|dbj|BAI28732.1| hemolysin D [Escherichia coli O26:H11 str. 11368]
 gi|257762466|dbj|BAI33962.1| hemolysin D [Escherichia coli O103:H2 str. 12009]
 gi|283445172|gb|ADB20516.1| hemolysin D [Escherichia coli O26:H-]
 gi|320187888|gb|EFW62557.1| Microcin H47 secretion protein [Escherichia coli O157:H7 str.
           EC1212]
 gi|323157090|gb|EFZ43216.1| hemolysin secretion protein D, plasmid [Escherichia coli EPECa14]
 gi|325699395|gb|ADZ45126.1| hemolysin D [Escherichia coli]
 gi|326337141|gb|EGD60977.1| Microcin H47 secretion protein [Escherichia coli O157:H7 str. 1125]
 gi|326347639|gb|EGD71357.1| Microcin H47 secretion protein [Escherichia coli O157:H7 str. 1044]
          Length = 479

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 152/362 (41%), Gaps = 55/362 (15%)

Query: 31  LITWSILL------------PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            + WSILL             +E+   ++G+  +     EIK   + I++K  V++GS +
Sbjct: 59  FVVWSILLFVIISLLLSVLGKVEVVSVANGKFTHSGRSKEIKPIENAIVEKIMVKDGSFV 118

Query: 79  LQGTPL--LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-----YDVLEKAF 131
            +  PL  LT   +E+                  D  KS    L  K     Y +L ++ 
Sbjct: 119 KKNDPLVELTVPGVES------------------DILKSEASLLYEKTEQYRYAILSESI 160

Query: 132 ---ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL---TRMRSIYLNRLDLENKS 185
              E  E ++ DF G   +   + F   +SS+ +   M        + + LN+  +E  +
Sbjct: 161 QRNELPEIRITDFPGGEDNAGGEHFQR-VSSLIKEQFMTWQNRKNQKQLTLNKKIVERDA 219

Query: 186 SLLRALLSSHQ-----KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +L R  L  HQ     + L   K L  K AVSQ+ + +QE    ++  E    + +   +
Sbjct: 220 ALARVSLYEHQVSQEGRKLNDFKYLLNKKAVSQHSVMEQENSYIQAKNEHAVWLAQVSQL 279

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT---ILSPIA 297
            + I  + +E  LE   +  EI   +E+++++  + +     LEK R++K    I +P++
Sbjct: 280 EKEIELVREELALETNIFRSEI---IEKHRKSTDNIVLLEHELEKNRQRKASSFIKAPVS 336

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+      +       ++ LM IVP + +  + A V  K I  ++ G    ++   Y  
Sbjct: 337 GTVQELNIHTEGGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQPGQEVVIKVDAYPY 396

Query: 358 IR 359
            R
Sbjct: 397 TR 398


>gi|57238890|ref|YP_180026.1| alkaline protease secretion protein AprE [Ehrlichia ruminantium
           str. Welgevonden]
 gi|58578819|ref|YP_197031.1| alkaline protease secretion protein AprE [Ehrlichia ruminantium
           str. Welgevonden]
 gi|57160969|emb|CAH57875.1| putative secretion protein [Ehrlichia ruminantium str. Welgevonden]
 gi|58417445|emb|CAI26649.1| Alkaline protease secretion protein aprE [Ehrlichia ruminantium
           str. Welgevonden]
          Length = 514

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 86/439 (19%), Positives = 179/439 (40%), Gaps = 33/439 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +L   G+ G+  W+ + P++ SV + GE+++      ++    GII+K  V+ G  + 
Sbjct: 86  IVILLFFGVFGI--WAAVAPLDGSVVAQGEVISSSEKQIVQHLEGGIIEKILVKEGEFVE 143

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +  P++   +      +D+ K  + ++    +   +A+ +  N             +++ 
Sbjct: 144 KNQPIIYLHNTTAQANLDIIKERMLDMLA-TEARLTAIKYNYNHIKFPNSINNLSNKEIR 202

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ--- 196
           D + K      +     IS     L+ +  ++        +L   S+ L +  + HQ   
Sbjct: 203 DQIIKNQQQLFESHQKNISGQINILQQRTKQLHQ------ELSGLSAQLTSATTQHQLIN 256

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L   K+L     +S+  +   ER       E +  I + ++ +  +N+   E  LE  
Sbjct: 257 EELAAKKSLLADGYISKPYIIALER----QYAESQGKIGQIESAIASVNQKIGENKLEII 312

Query: 257 NYLK----EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           N       +IS +L+      AD   ++   +   ++  I SP +G I   +  +     
Sbjct: 313 NITNNVQNKISIELKDTISAIADLKERMKTAQDVLDRTVIRSPQSGIITGLKYHTEGGVI 372

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI-----I 367
               P+  +VP +    + AK+  + I+ +    T  V    Y + +  K K       I
Sbjct: 373 PPGAPITNVVPSNDNLIVDAKIQTRNIEEILSAQTKEVNMVSYENYKGLKAKVRLSAYNI 432

Query: 368 EKI---DPIISQQDNNLQTQ----EYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAKN 419
            K+   + I++Q   +  T+     YY++ + I  + +    N+ L  G PAEV    ++
Sbjct: 433 RKVGLANGIVTQVSADALTEANGMRYYKIQVIIPKEQSKKLKNLRLYPGMPAEVFIITQS 492

Query: 420 TTLAQEIIHPITDNWPKIF 438
            TL   +  PIT  + K F
Sbjct: 493 RTLLNYLFTPITSTFEKAF 511


>gi|294675739|ref|YP_003576354.1| hemolysin D [Rhodobacter capsulatus SB 1003]
 gi|294474559|gb|ADE83947.1| type I secretion membrane fusion protein, HlyD family [Rhodobacter
           capsulatus SB 1003]
          Length = 390

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 82/413 (19%), Positives = 163/413 (39%), Gaps = 65/413 (15%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           + I+  + WS    I+  V   GEI++      I++   GI+ +  V  G ++  GT L 
Sbjct: 25  LSILAFLVWSAYARIDQIVRGPGEIVSSSKPQIIQNLEGGILAELNVSEGDEVSPGTVLG 84

Query: 86  TFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
              +      +D  K  I  L   +  ++ E + LD            F   EEQ  D L
Sbjct: 85  RLHETSYRTQVDDLKAQIAALEIRQLRLEAEMNGLD-----------EFVPSEEQ--DRL 131

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDLTM 201
                         +  + +S         ++ L RL D  ++     A+L   + +  M
Sbjct: 132 --------------VPEIVKS-------ESALLLARLSDYASRKKGAAAILKQAKAERDM 170

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           ++ +FE++     ++ +  +    +  +L              N++  +A L+ A+    
Sbjct: 171 LEKMFERDVAPLIEVTKARKAYSDAEAQL--------------NDITTKAELDRAS---- 212

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
              D  +          +L + E    + T+ SP+ G +      +     +  + +++I
Sbjct: 213 ---DYSETLEKLGTLRQQLKLSEDQLTRTTLTSPMHGIVNKLSVTTIGGVVRPGEEILEI 269

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           +P  +  +I A++ PK I +VK G  AT++   Y        +  +  +     + +   
Sbjct: 270 IPLDEELFIDARIAPKDIANVKLGQAATIKLSAYDYTIYGSLQGAVHFVSADTFKDEQKP 329

Query: 382 QTQEYYEVILKITDLAF---SDNNIELRNGFPAEV-LFTAKNTTLAQEIIHPI 430
             + YY+V L++ DLA        +E+R G  A V L+T + T L Q ++ P+
Sbjct: 330 DAEPYYKVTLRV-DLARLTERQRRLEIRPGMQATVELYTGEKTVL-QYLLKPL 380


>gi|255264002|ref|ZP_05343344.1| type I secretion membrane fusion protein, HlyD family
           [Thalassiobium sp. R2A62]
 gi|255106337|gb|EET49011.1| type I secretion membrane fusion protein, HlyD family
           [Thalassiobium sp. R2A62]
          Length = 431

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 96/452 (21%), Positives = 179/452 (39%), Gaps = 49/452 (10%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W   K   P  +  + L+ ++G  G  TW++   I  ++ +SG I  + N   I+ P  G
Sbjct: 7   WSARK---PLIIGFLALIVLVG--GFGTWAVRTQITGAIIASGRIEVDQNRQIIQHPTGG 61

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I+ +  V  G            E +E  ++  L ++     R  +   +  L  L  +  
Sbjct: 62  IVAEILVREG------------EPVEAEEI--LMRLDDNAYRSELAIIEGQLFELIARRG 107

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENK 184
            LE   +  +E + D L        +    G       L++ + R R+   N++D L  +
Sbjct: 108 RLEAERDGMKEIVFDMLLDEAGAQGESLKAG------QLRLFVAR-RASEDNQIDQLTKR 160

Query: 185 SSLLR---ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN----IHEQ 237
           +  +R     + + Q  LT    L E+  VSQ  L  +        L LR      +  Q
Sbjct: 161 AGQIRNQIEGIVAQQAALTEQLALIEEELVSQQALLDRGLAQAARVLALRREKASLLGSQ 220

Query: 238 KNMLRHINEL------YDEANLEFANYLKEIS----RDLEQNQRTFADEMSKLTILEKTR 287
            +    I +        D   +   N  +E +    RDL+ N+   ++  + L +     
Sbjct: 221 GDFTAQIAQAEGRITETDIQIITLDNERREDAITRLRDLQFNELELSERRAALLV---EL 277

Query: 288 EQKTILSPIAGTIVYNQS-FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           ++  I +P++G IVY+ + F+  +  + + PLM +VP  +   I A+V    I  V  G 
Sbjct: 278 DRLDIRAPVSG-IVYDLTIFAPRSVVRPADPLMYLVPQDRPLVIAAEVETIHIDQVFVGQ 336

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              VRF  +   R  +    + ++     + +    +    E+IL   ++    +++ L 
Sbjct: 337 EVNVRFSAFDQRRTPELIGRVTQVSADAFEDERRGASFYRAEIILVDGEIEKLPDDLTLI 396

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            G PAE      + T    +I P+ D + K F
Sbjct: 397 PGMPAESFLRTDDRTPLDYLIKPLADYFAKAF 428


>gi|119776392|ref|YP_929132.1| HlyD family secretion protein [Shewanella amazonensis SB2B]
 gi|119768892|gb|ABM01463.1| HlyD family secretion protein [Shewanella amazonensis SB2B]
          Length = 460

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 81/403 (20%), Positives = 163/403 (40%), Gaps = 46/403 (11%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           ++  +  + P S  R+T+ ++  +I   + W+    ++     +G+++    +  I+S  
Sbjct: 16  VYGAMMTDAPTS-HRLTIWALTSLIFAFLIWAYFAELDQVTVGTGKVIPSSQIQVIQSLD 74

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G++++  V  G+ + +G PL   +D         ++  + +L+ ++   ++ L    N 
Sbjct: 75  GGVLQELFVREGNIVAKGEPLARIDDTRFRSDFAQQEEEVFSLQANVIRMRTEL----NS 130

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LE 182
             V + A + RE+  +            +F   +S+    L   + R ++ Y  RLD LE
Sbjct: 131 ITVSDMASDWREQVRI-------VKQELIFPDALSAQKAEL---VARQQAEYNGRLDNLE 180

Query: 183 NKSSLLRALLSSHQ---------------------KDLTMMKNLFEKNAVSQNDLNQQER 221
           N+  +L   +   Q                     ++L + + L +K  V + +L + ER
Sbjct: 181 NQLEILARQIQQRQQENEELTTKIATMTTSFQLISRELELTRPLAQKGIVPEVELLKLER 240

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANL---EFANYLKEISRDLEQNQRTFADEMS 278
            V     EL+  +   + +   I    DEA L   E        +R    + +T    MS
Sbjct: 241 TVN----ELQGELKAMRQLRPKIKATLDEAILKRREAVFVFAADTRAQLNDMQTRLSRMS 296

Query: 279 KLTILEKTREQKTIL-SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +  +  + +  K ++ SP+ GT+      +     Q    +M+IVP      I AK+TPK
Sbjct: 297 EAQVGAQDKVSKAVITSPVNGTVKTVHINTLGGVVQPGVDIMEIVPSEDQLLIEAKITPK 356

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
            I  +  G  A V+   Y   R    +  +E I    +Q +  
Sbjct: 357 DIAFLHVGLPAVVKVTAYDFTRYGGLQGTVEHISADTTQDEEG 399


>gi|238785781|ref|ZP_04629753.1| HlyD family secretion protein [Yersinia bercovieri ATCC 43970]
 gi|238713315|gb|EEQ05355.1| HlyD family secretion protein [Yersinia bercovieri ATCC 43970]
          Length = 446

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 79/421 (18%), Positives = 169/421 (40%), Gaps = 43/421 (10%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           IG + W+ L P++  ++  G+I+  +N   I+    G I++  V  G ++ QG  L+T +
Sbjct: 43  IGFLLWAGLAPLDKGIAVMGQIVVAENRKVIQPLQGGRIQQLHVIEGDEVEQGQLLITLD 102

Query: 89  DIETTDLIDLKKVSIKNLRCHIDT-EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           D                +R H D  +   L  L  +  ++ +  +  E   +DF      
Sbjct: 103 DTA--------------IRSHRDNLQHQYLSALAQESRLIAEQHDWPE---IDFPEVLLQ 145

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE-----NKSSLLRALLSSHQKDLTM- 201
             ++       ++ R L +   + +   + RL  +     ++ S L+AL  ++Q  L + 
Sbjct: 146 DSAQYLVERTIALQRQLFLHRRQAQRSEIARLSAQITRHQSRLSGLQALRDNNQHQLDLF 205

Query: 202 ------MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                 +++L +   V+QN L   ER      + LR  + +  + +    +L DE     
Sbjct: 206 QQQLHGVQSLAKNGHVAQNQLLDMER----QAISLRTRVEQDSSDITEAYKLIDETEQHI 261

Query: 256 A----NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           +     Y  E    L + Q+   +   +L++ E   E   + +P++G+++     +    
Sbjct: 262 SQRREQYQSENREQLAKAQQATQELEQRLSVAEFELENTRVTAPVSGSVIALAQHTVGGV 321

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               Q LM++VP  +   + A++    I     G    + F  +      +    + +I 
Sbjct: 322 VSTGQTLMELVPSGQPLLVEAQLPVALIDKAMVGLPVDLNFSAFNQSTTPRLYGSVLRIG 381

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
              + +  + QT E Y  +  + D+  +   +++R G   +V       +L   +  P+T
Sbjct: 382 ---ADRIQHPQTLEPYYPLTIVFDI--NQTPLKIRPGMSVDVFIRTGERSLLNYLFKPLT 436

Query: 432 D 432
           D
Sbjct: 437 D 437


>gi|2062126|emb|CAA73293.1| prsE [Rhizobium leguminosarum]
          Length = 435

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 90/439 (20%), Positives = 170/439 (38%), Gaps = 51/439 (11%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           LSI  + G+  W+    +  +V   G I+ + +V +++    GI+ +  V     +  G 
Sbjct: 22  LSIALVCGIGGWAATTELSSAVIGEGVIVVDGDVKKVQHLTGGIVSELLVAENDHVTAGQ 81

Query: 83  PLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            L+  +   T   + + + ++  L   R  +  E+   D           +FE  EE + 
Sbjct: 82  VLIRLDGTTTRANLSIVESTLAQLYARRARLKAERIGAD-----------SFEV-EENIT 129

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRAL------ 191
           D      ST +     G   ++ S +  L  M+S   +R D   E    L+  +      
Sbjct: 130 DL---TSSTSAAKLLDGEQKLFDSRRTALIGMKSQLASRKDQLAEQVKGLVVQINATSDA 186

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQER----IVYKSTLELRENIHEQKNML---RHI 244
           L   +++L  +  L++K  V+   LN  +R    +   S  E+      +   +   R  
Sbjct: 187 LGLIEQELEGIDTLYKKGLVTLQRLNTLKRARADLQGNSGQEIASKAEAEGKAIEIDRQS 246

Query: 245 NELYDEANLEFANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
            +L ++   E A  L ++   +   E+ + T  D++ +L I           +P+ G + 
Sbjct: 247 IQLDEDRRSEIAKDLTDVEAQIAEYEERRGTALDQLHRLDIT----------APLTGRVH 296

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                + +      Q LM +VP +    + AKV  + I  V  G +  VRF  +      
Sbjct: 297 ELSVHTVNGVIDPGQTLMLVVPENNELTVEAKVATRDIDQVHVGQSVDVRFSAFDQRTTP 356

Query: 362 KFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKN 419
                I  I P I+  +   +    YY + +K    + +    I+L  G PAEV     +
Sbjct: 357 DVSGEITSIAPDIVKDERTGIS---YYPLRVKPKAESIARMKTIKLYPGMPAEVFIKIGD 413

Query: 420 TTLAQEIIHPITDNWPKIF 438
            T+   +  P+TD    +F
Sbjct: 414 RTVISYLTKPLTDQMQHVF 432


>gi|254560213|ref|YP_003067308.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens DM4]
 gi|254267491|emb|CAX23332.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens DM4]
          Length = 458

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 79/430 (18%), Positives = 186/430 (43%), Gaps = 33/430 (7%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           + +  G+ G   W+  + ++ +V S+G I+ E +   ++    G+++   V++G  +  G
Sbjct: 46  IAAAFGVAG--GWAATVRLDRAVISTGVIVAETSRKVVQHFEGGMVQAVLVKDGQTVRSG 103

Query: 82  TPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             LL  + +++    DL +  +     L   +  E++  D L    D+   A    E  L
Sbjct: 104 DILLRIDPLQSQASADLFRNQLDAALVLEARLRAEQAQSDDLQLPADI---AARRNEPAL 160

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS----IYLNRLDLENKSSLLRALLSS 194
              +G      ++     +      ++ K+T++R+    + + +  +E +   +R     
Sbjct: 161 ARMIGDQAGQLAERRTT-LKGQLALIEAKVTQLRTEISGLAVEKSSVEQQVGFIR----- 214

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYDEAN 252
             ++L  +++L E+N +  + L   ER   ++ LE  +  ++ E+      I+E   +  
Sbjct: 215 --QELEGLRSLHERNLIPLSRLLVMER--ERTRLEGVIGRSVAERAKAENAISEAGLQVT 270

Query: 253 LEFANYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +    L+E ++  L + ++   +   KL + +    +  I +   G I   + F+    
Sbjct: 271 -QLKQKLQEAVTGQLLETRQRIGELREKLVVAQDVFRRHEIRASHDGVIQGLKVFAIGQV 329

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +  +PLM+IVP +    +  + +P  ++ V  G  A ++FP +   + ++  A+   + 
Sbjct: 330 VRSGEPLMEIVPTADRLVVNVQFSPNDLEAVHAGMRAEIKFPTF---QARRTPAVFGTLT 386

Query: 372 PIISQQD--NNLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            ++S+    +    Q Y+   ++I +    ++    L  G PAEV+ +A   T  + +  
Sbjct: 387 -VVSRDRLVDEGSKQAYFAGTVEIDEHQLPTEVRHRLLAGLPAEVVVSAGERTALEYLFA 445

Query: 429 PITDNWPKIF 438
           P  D   + F
Sbjct: 446 PFFDAMGRAF 455


>gi|332534697|ref|ZP_08410526.1| type I secretion membrane fusion protein, HlyD family
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035847|gb|EGI72330.1| type I secretion membrane fusion protein, HlyD family
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 473

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 97/447 (21%), Positives = 187/447 (41%), Gaps = 59/447 (13%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W+ +++  PAS + +  L  +  I LI WS    ++      G ++  + +  I+S   G
Sbjct: 53  WEKMQQ-EPASARLLLYLICLTFICLIVWSGFANLDEVARGEGRVIPSNKLQLIQSYDGG 111

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +++K  V+ G  + +G  L+    I+ T  I                 +S ++ L+ K  
Sbjct: 112 MVEKINVKEGQIVNEGDVLI---KIDPTRFI-----------SSFRENQSKVESLSAKVA 157

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD----- 180
            L    + +E   L F         +V  +   S+Y S   +L +  SI+  +L+     
Sbjct: 158 RLRALTQKKE---LVFSESVIKNAPRVVQHE-RSLYLSNSQELEQQVSIHKRQLEQRHQD 213

Query: 181 -LENKSSLLR--ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN---- 233
            +E K++L +  + L    ++L++ + L    A+S  D+ + ER +     E+       
Sbjct: 214 YIEAKAALEQHTSALRLTNRELSVTRPLLRTGAISDIDIIRLERQIVDLNGEINRTKAVI 273

Query: 234 ------IHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
                 I+E KN +  +   + +  N E +  L  +   +++ +   AD+++        
Sbjct: 274 NRSLSAINEAKNKVTEVELVMINRWNNELSEALLRLD-SIKETESGLADKVT-------- 324

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             Q  I SP+ GT+      +     Q    +M+IVP      + AK+ PK I  ++ G 
Sbjct: 325 --QTEIRSPVKGTVQRLLVNTVGGILQPGSDVMEIVPLDDQLVVEAKIPPKDIAFLRPGQ 382

Query: 347 TATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           +A ++F  Y        +A +  I  D I   ++N      +Y V LK T   FS   + 
Sbjct: 383 SAMIKFSAYDFAVYGGLEAEVLHISADTITDDRENT-----FYLVQLKTTKNNFS-KELT 436

Query: 405 LRNGFPAEV-LFTAKNTTLAQEIIHPI 430
           +  G   +V + T K T L + ++ P+
Sbjct: 437 IIPGMTTQVDIITGKKTVL-EYLLKPV 462


>gi|260751839|ref|YP_003237753.1| hemolysin D [Escherichia coli O111:H- str. 11128]
 gi|257767831|dbj|BAI39323.1| hemolysin D [Escherichia coli O111:H- str. 11128]
          Length = 479

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 152/362 (41%), Gaps = 55/362 (15%)

Query: 31  LITWSILL------------PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            + WSILL             +E+   ++G+  +     EIK   + I++K  V++GS +
Sbjct: 59  FVVWSILLFVIISLLLSVLGKVEVVSVANGKFTHSGRSKEIKPIENAIVEKIMVKDGSFV 118

Query: 79  LQGTPL--LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-----YDVLEKAF 131
            +  PL  LT   +E+                  D  KS    L  K     Y +L ++ 
Sbjct: 119 KKNDPLVELTVPGVES------------------DILKSEASLLYEKTEQYRYAILSESI 160

Query: 132 ---ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL---TRMRSIYLNRLDLENKS 185
              E  E ++ DF G   +   + F   +SS+ +   M        + + LN+  +E  +
Sbjct: 161 QRNELPEIRITDFPGGEDNAGGEHFQR-VSSLIKEQFMTWQNRKNQKQLTLNKKIVERDA 219

Query: 186 SLLRALLSSHQ-----KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +L R  L  HQ     + L   K L  K AVSQ+ + +QE    ++  E    + +   +
Sbjct: 220 ALARVSLYEHQVSQEGRKLNDFKYLLNKKAVSQHSVMEQENSYIQAKNEHAVWLAQVSQL 279

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT---ILSPIA 297
            + I  + +E  LE   +  EI   +E+++++  + +     LEK R++K    I +P++
Sbjct: 280 EKEIELVREELALETNIFRSEI---IEKHRKSTDNIVLLEHELEKNRQRKASSFIKAPVS 336

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+      +       ++ LM IVP + +  + A V  K I  ++ G    ++   Y  
Sbjct: 337 GTVQELNIHTEGGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQPGQEVIIKVDAYPY 396

Query: 358 IR 359
            R
Sbjct: 397 TR 398


>gi|240137642|ref|YP_002962113.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens AM1]
 gi|240007610|gb|ACS38836.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens AM1]
          Length = 458

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 79/430 (18%), Positives = 186/430 (43%), Gaps = 33/430 (7%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           + +  G+ G   W+  + ++ +V S+G I+ E +   ++    G+++   V++G  +  G
Sbjct: 46  IAAAFGVAG--AWAATVRLDRAVISTGVIVAETSRKVVQHFEGGMVQAVLVKDGQTVRSG 103

Query: 82  TPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             LL  + +++    DL +  +     L   +  E++  D L    D+   A    E  L
Sbjct: 104 DVLLRIDPLQSQASADLFRNQLDAALVLEARLRAEQAQSDDLQLPADI---AARRNEPVL 160

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS----IYLNRLDLENKSSLLRALLSS 194
              +G      ++     +      ++ K+T++R+    + + +  +E +   +R     
Sbjct: 161 ARMIGDQAGQLAERRTT-LKGQLALIEAKVTQLRTEISGLAVEKSSVEQQVGFIR----- 214

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYDEAN 252
             ++L  +++L E+N +  + L   ER   ++ LE  +  ++ E+      I+E   +  
Sbjct: 215 --QELEGLRSLHERNLIPLSRLLVMER--ERTRLEGVIGRSVAERAKAENAISEAGLQVT 270

Query: 253 LEFANYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +    L+E ++  L + ++   +   KL + +    +  I +   G I   + F+    
Sbjct: 271 -QLKQKLQEAVTGQLLETRQRIGELREKLVVAQDVFRRHEIRASHDGVIQGLKVFAIGQV 329

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +  +PLM+IVP +    +  + +P  ++ V  G  A ++FP +   + ++  A+   + 
Sbjct: 330 VRSGEPLMEIVPTADRLVVNVQFSPNDLEAVHAGMRAEIKFPTF---QARRTPAVFGTLT 386

Query: 372 PIISQQD--NNLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            ++S+    +    Q Y+   ++I +    ++    L  G PAEV+ +A   T  + +  
Sbjct: 387 -VVSRDRLVDEGSKQAYFAGTVEIDEHQLPAEVRHRLLAGLPAEVVVSAGERTALEYLFA 445

Query: 429 PITDNWPKIF 438
           P  D   + F
Sbjct: 446 PFFDAMGRAF 455


>gi|34497191|ref|NP_901406.1| secretion protein [Chromobacterium violaceum ATCC 12472]
 gi|34103048|gb|AAQ59411.1| secretion protein [Chromobacterium violaceum ATCC 12472]
          Length = 382

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 82/420 (19%), Positives = 157/420 (37%), Gaps = 64/420 (15%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           R+   S   ++G   W+   P++     SG+++   +   +++   G ++   V  G ++
Sbjct: 10  RLIWASAAAVLGAGVWAANAPLDQITRGSGQVIASSHTQIVQAADGGTMQHLYVREGDRV 69

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  L   +      ++   +     L  +I   K+                       
Sbjct: 70  KRGQLLAEMDRARAESMVKESEARAAALYANISRLKA----------------------- 106

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +  G       +V  Y           +  R +SI   +     + + +R  LSS Q  
Sbjct: 107 -EVFGGEPQFPVEVNGY----------PEFQRNQSILFIK-----RQAAIREELSSLQSS 150

Query: 199 LTMMKNLFEKNA--VSQNDLNQQERI-VYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           L ++KN  + N   V Q D+++ + + + +   EL   I  +KN                
Sbjct: 151 LAIVKNELDMNLPLVKQGDVSRADILRLQRQMAELSGQITNRKN---------------- 194

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS-PIAGTIVYNQSFSSSNYAQQ 314
             YL++   +L + +   A  +S++    +     T LS P+ G I   +  +     + 
Sbjct: 195 -KYLQDSQTELSKAEEDLAS-VSQIKAQRQDALNNTRLSAPVDGVIKSVRMTTPGAVLKP 252

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + L+ IVP      + AK+ P  I ++KKG  ATV+F  +       FK ++  I    
Sbjct: 253 GEELLSIVPAGDELVVEAKIKPADIAYLKKGLPATVKFDAWDYSIYGAFKGVVSYISADT 312

Query: 375 SQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             ++     Q +Y V + +    F       IEL+ G  A+V       T+ Q +  PIT
Sbjct: 313 LTEEGKHGDQLFYRVKISLPRQNFLNVKGKLIELQPGMTAQVDIKTGTRTVLQYLTKPIT 372


>gi|281358602|ref|ZP_06245081.1| type I secretion membrane fusion protein, HlyD family [Victivallis
           vadensis ATCC BAA-548]
 gi|281314950|gb|EFA98984.1| type I secretion membrane fusion protein, HlyD family [Victivallis
           vadensis ATCC BAA-548]
          Length = 447

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 82/417 (19%), Positives = 166/417 (39%), Gaps = 37/417 (8%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           + G + W+ +  +++ V ++G+++ +   V IK     +IK   V+ G  + +   L+ F
Sbjct: 43  LAGAVIWACVSQVDVIVGATGKLVTDTPPVVIKPLERTVIKSIDVKVGDVVKKDQVLMHF 102

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKY 145
           + +     I   +  +  L    +  +   +F N  Y   + A E  E QL  +    K+
Sbjct: 103 DPVNNLAEIARLESEVSTLTAQFN--RLLAEFKNQPYQPGDTANEDVEWQLAIYKQRRKF 160

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           +    + ++  I+ +  S           +     LE ++  L A+    Q    +   L
Sbjct: 161 YDEKIRYYDQSIAQIKASQ----------HSTEESLEKQTERLEAVKKIEQ----IYTKL 206

Query: 206 FEKNAVS-------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            +K A+S       Q    + E  V K    L E  H+++  +   N   +E     +  
Sbjct: 207 LDKKAISLKETLEIQITRMEMESEVDKLRNSLVEQKHQEQTAVASKNSYIEEWRNSISEE 266

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L ++ R+L  NQ+++ ++  +L   ++ R      SP    +    +FS  +  ++++ L
Sbjct: 267 LVKVQRELTSNQKSY-EKAVQLNSYDRLR------SPCDAVVHEIAAFSVGSAVREAEAL 319

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQ 376
           + +VP      + A++ PK I  V    +  ++   +   +    +  I  I  D    Q
Sbjct: 320 ITLVPLDSKIELEAEIEPKDIAKVHTDSSCRIKLNAFPFQKHGTLEGTIRNISEDTFQRQ 379

Query: 377 QDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           Q     T+ YY   + I D   L     N  L  G  A+V        + + +IHP+
Sbjct: 380 QGEAGATRTYYRARIDIDDKVKLRGVPENFRLIPGMEAQVEIRVGRRRVIEYVIHPL 436


>gi|16264639|ref|NP_437431.1| HlyD family protein secretion protein [Sinorhizobium meliloti 1021]
 gi|1890591|emb|CAB01939.1| ExpD2 [Sinorhizobium meliloti]
 gi|15140777|emb|CAC49291.1| putative membrane-fusion protein WgdB (formerly ExpD2)
           [Sinorhizobium meliloti 1021]
          Length = 473

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 92/448 (20%), Positives = 176/448 (39%), Gaps = 55/448 (12%)

Query: 17  LKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           ++R+ +  +  I+    G   W+    +  +  +SG I+ +     +     G++ +  V
Sbjct: 52  IRRLVIAGLTTILVAFGGFFGWAFSTELSSASVTSGTIVVDSKRKTVSHFEGGVLGRILV 111

Query: 73  ENGSQILQGTPLLTFEDIET-TDLIDL--KKVSIKNLRCHIDTEKSALDFLNNKYDVL-- 127
           + G  +  G PL+  ED    +DL  L  ++V +      +  E++ L  ++   D++  
Sbjct: 112 QEGDHVAPGQPLMKLEDTRARSDLQALQSRRVGLIAKLARLRAERAGLHAVSFPADLVSE 171

Query: 128 ----------EKAF-ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIY 175
                     EKAF E R E     L     T  +      S   +SL  +L    R I 
Sbjct: 172 GEAAADAVTAEKAFFEKRSEAKESRLAIQRKTIEE-----YSEKAKSLTAQLQATDRQIE 226

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS---QNDLNQQERIVYKSTLELRE 232
           L        ++L+    +   K + +   L E  A       D  Q E+ +  + L L  
Sbjct: 227 LMNEQRTAIATLVEKAFAQRSKLIEIDARLSELAATRGELAGDKAQAEKAMAGAELAL-- 284

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            I  + +    I      A LE A        ++EQ          ++T  E    +  I
Sbjct: 285 -IGIESDFQSEIAGEITTARLELA--------EVEQ----------RITAAEDVLRRLEI 325

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P AG +   Q  +  +     QPL+ IVP  +   +   V+ + I  +  G +  +R 
Sbjct: 326 RAPQAGIVANIQLRTPGSAVTPGQPLLDIVPEDEPLLVEMHVSTRDIDSITIGSSTQIRL 385

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDN-NIELRNGFP 410
             Y    ++    +  K+  I + Q  + ++   Y+    ++T  + + N +I L  G P
Sbjct: 386 TAY---NQRSHLPLEGKVTYIAADQSVDEKSNVAYFVARAEVTPESLAANPDIRLYPGMP 442

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           AEVL   K+ +    ++ P++D++ + F
Sbjct: 443 AEVLIVHKSRSAIDYLVAPVSDSFNRAF 470


>gi|304321764|ref|YP_003855407.1| rhizobiocin secretion protein rspE [Parvularcula bermudensis
           HTCC2503]
 gi|303300666|gb|ADM10265.1| rhizobiocin secretion protein rspE [Parvularcula bermudensis
           HTCC2503]
          Length = 436

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 85/425 (20%), Positives = 171/425 (40%), Gaps = 24/425 (5%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S++   ++  +G  G   WS L  ++  V++SG ++ + +  +++    GII++  V  G
Sbjct: 15  SIRISAIVCAVGFGGFFLWSALAKLDEGVTASGVLVVQSDRKQVQHLEGGIIRELHVREG 74

Query: 76  SQILQGTPLLTFEDIETTDLID-LKKVSIKNLRC-----HIDTEKSALDFLNNKYDVLEK 129
             +++G  L+  E +++    D + +    NL        + T ++  +F  ++ D L  
Sbjct: 75  ETVVEGDVLVVLEPLQSETARDEIAQEMAANLAAVLRLTALKTGEATPNF--SRIDNLAI 132

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLL 188
               R E +   L         +FN   ++    L + LT+  +    R+ +L N+ +  
Sbjct: 133 GQSVRTEIVASQL--------ALFNQQRAAQQARLDL-LTQQEATLSGRVRELSNQLAAT 183

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L + ++DL + + L E+   +  +++   R V +   +      EQ      I  + 
Sbjct: 184 RRALEAAREDLVLRQQLLEERLETAGNVSAIRREVARLEADYSRLRGEQSEARESIQTVA 243

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E     A++ + I   L + Q  +     +L+ L+    +  + +P +G IV N  +S+
Sbjct: 244 REKAQTEADFQEGIGGQLVEAQGLYLAARERLSALDDRLARTVVRAPESG-IVLNLEYST 302

Query: 309 -SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                     LM+IVP +       +V P     V+ G     +   Y           +
Sbjct: 303 VGGVLSPGGMLMEIVPVTDNLVASVRVMPTDRDAVEPGQEVRAKLTAYKSFLVPDLAGEV 362

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT--TLAQE 425
            K+   + Q +         EV L  +D+  +    +L  G P E  F A  T  T    
Sbjct: 363 MKVSADLKQDEATGAVYYEAEVRLDASDVE-AKTRFDLLPGMPVET-FIASGTSRTFLDY 420

Query: 426 IIHPI 430
           ++ PI
Sbjct: 421 VLEPI 425


>gi|307151229|ref|YP_003886613.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7822]
 gi|306981457|gb|ADN13338.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7822]
          Length = 505

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 106/478 (22%), Positives = 198/478 (41%), Gaps = 58/478 (12%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  K L    P +  R  L  ++  + L+  W+I   I+ + ++ G I  E+  V++ + 
Sbjct: 35  YATKELLDTLPKAWTRGLLYFLLIFVSLVLPWAIFSKIDETGTARGRIEPEEETVKLDAA 94

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI--DLKKVSIK-----NLRCHIDTEKS 115
            +G + + +V+ G  +  G  LL  E    +DL+  DLK+   K     N    +   KS
Sbjct: 95  VAGTVSEIRVKEGDTVKAGQVLLMLE----SDLVKSDLKQAQDKLEGQLNRLNQLKLLKS 150

Query: 116 ALDFL------NNKYDVLEKAFE-SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            L F        NK   LEK  +  + +Q LD L    +T + + +  I+ + ++     
Sbjct: 151 QLIFALSTQQQQNKAGELEKQAQIDQAQQNLDNL---KTTYNLLESEKIAQLNQAEATLK 207

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV----------SQNDLNQ 218
              R+  L ++ + N    ++    + ++ +     + EK  +          SQ+D+ Q
Sbjct: 208 NNQRAYKLAQIRVANSQREIKRYKEAWEEGIASEIQVVEKEDIAQEKQGNYEQSQSDVEQ 267

Query: 219 -------QERIVYKSTLELRENIH-------EQKNMLR---HINELYDEANLEFANYLKE 261
                  Q+ I +KS  + + +I        EQ+  L+   H NEL   A L+    LK 
Sbjct: 268 AKLRLAEQQSIFHKSIKQAKSDIEQAELRLKEQQRSLQTLIHSNEL---ARLKIEEQLKN 324

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           I  D    +   A   S++  L+    Q+T+ +P++G I       +    Q    + +I
Sbjct: 325 IDTDTASLKAEIALSKSQIQSLQFQLSQRTLKAPVSGVIFQLPIQQAGAVVQPGTRVAEI 384

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                   +RA++   +   +KKG    ++F  Y     +  +  + +I P  SQ D   
Sbjct: 385 ASQKTPLILRAQMPTTESGSLKKGLPVKIKFDAYPYQDYELVEGKLLEISPTTSQIDTAK 444

Query: 382 QTQEYY--EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              E Y  E++L  T +  ++  + LR G  A    TA+     + II  + D + K+
Sbjct: 445 GKVEVYKLEIVLAQTCVKTANQCVALRPGDTA----TAEVIVRQRRIIDFVLDPFKKL 498


>gi|163737146|ref|ZP_02144564.1| Type I secretion membrane fusion protein, HlyD [Phaeobacter
           gallaeciensis BS107]
 gi|161389750|gb|EDQ14101.1| Type I secretion membrane fusion protein, HlyD [Phaeobacter
           gallaeciensis BS107]
          Length = 438

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 67/335 (20%), Positives = 140/335 (41%), Gaps = 31/335 (9%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           TWS+   I  +V +SG I  + N   ++    GI+++  VE G  + +G  LL  +  E 
Sbjct: 33  TWSVATSIAGAVVASGRIEVDRNRQVVQHLDGGIVQEILVEEGDTVAEGAVLLRLDAKEL 92

Query: 93  TDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV-LEKAFESREEQLLDFLGKYHST 148
              + + +  +  L   R  +D E+ + + +  ++D  L    E+R E     +      
Sbjct: 93  RSQLVITEGQLFELMARRARLDAERDSAETV--EFDTELHDLSETRPE-----VADLMQG 145

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             ++F     SV R +     R   I    + +  + +  R  L   +++LT  ++L ++
Sbjct: 146 QVRLFEARKDSVAREIDQLEKRRTQIQDQIIGVRAQQASRRTQLDLIEEELTNQQSLLDR 205

Query: 209 NAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHIN----ELYDEANLEFANYLKE 261
                    +L + E  +  S  EL     + +  +  I+    +L  +   E    L++
Sbjct: 206 GLAQAGTVLNLRRTEADLQGSLGELIATEAQAEGRITEIDIEILKLGTQQREEAITRLRD 265

Query: 262 I---SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           +     +L + +R   D +++L I           +P++G +   Q  +  +  + + P+
Sbjct: 266 LRYQELELAETRRALKDRLARLDIT----------APVSGIVYGLQVHTPRSVIRAADPV 315

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           + +VP  +   I A+V P  +  +  G   T+RFP
Sbjct: 316 LYLVPQDRPLVIAAQVAPTDVDQIFVGQAVTLRFP 350


>gi|148258343|ref|YP_001242928.1| HlyD family secretion protein [Bradyrhizobium sp. BTAi1]
 gi|146410516|gb|ABQ39022.1| putative secretion protein (HlyD family) [Bradyrhizobium sp. BTAi1]
          Length = 446

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 73/415 (17%), Positives = 168/415 (40%), Gaps = 25/415 (6%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    I  ++ + G+I+ E NV +++ P  G++ + +  +G  +  G  ++  +D  T 
Sbjct: 44  WAATQQISGALIAPGQIVVESNVKKVQHPTGGVVGELRARDGDVVKSGDIVVRLDDTVTK 103

Query: 94  DLIDLKKVSIKNL------RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +    +  KNL         ++ E+     +     +L++  +     LL       +
Sbjct: 104 ASL---AIVTKNLDALLARAARLEAEQRGWAKILFPQQLLQRLSDPDVSGLL-------A 153

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL---LSSHQKDLTMMKN 204
           + +K+F   ++   R  +    R R   L   ++E  S+ + A    ++  QK+L  ++ 
Sbjct: 154 SETKLFEVRVNG--RIGQKAQLRERVAQLTE-EIEGLSAQVSAKEQEIALVQKELEGVRQ 210

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L+E++ V  + L   ER   +   E  + I  +      I+E   +      + + E+S+
Sbjct: 211 LYEQHLVQLSRLTTLERDTARLNGERAQFIAARAQAKGKISETELQIIQVDKDMVSEVSK 270

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           DL +      + + +    E    +  I +P  G ++ +   +          +M IVP 
Sbjct: 271 DLRETTDKIGEFVERKVTAEDQLRRVDIRAPQDGMVLQSSVHTVGGVITAGDTIMLIVPQ 330

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +    + AKV P+ I  ++ G    +R   +      +   ++ ++ P ++        Q
Sbjct: 331 ADDLQVEAKVNPQDIDKLQVGQKTLLRLSAFNQRTTPELNGVVSRVSPDVTTDQRT--GQ 388

Query: 385 EYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            YY + + +     +   +++L  G P E      + T+   ++ P+ D   + F
Sbjct: 389 SYYTIRVSMPPQEIARLGDVKLIPGMPVEAFVQTGDRTVLSYLMKPLHDQLMRAF 443


>gi|117926266|ref|YP_866883.1| HlyD family type I secretion membrane fusion protein [Magnetococcus
           sp. MC-1]
 gi|117610022|gb|ABK45477.1| type I secretion membrane fusion protein, HlyD family
           [Magnetococcus sp. MC-1]
          Length = 443

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 83/398 (20%), Positives = 157/398 (39%), Gaps = 65/398 (16%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +I L  W+    +++   ++GE++    +  ++    GI++   V+ G ++  G PL+  
Sbjct: 39  VISLGVWAYFGVLDVVTFTTGEVVPSSQIKHVQHLEGGILRVIHVKEGEEVKLGQPLIEL 98

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEK--------SALDF---LNNKYDVLEKA----FE 132
           E I   D  DL +++ + +   +D  +        +  D+   L +KY  L K     FE
Sbjct: 99  ESI--ADESDLSELTARMVGLQLDIIRHDAAAKLAAHPDYPPELVSKYPQLVKQSRALFE 156

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +R   L       H    ++ N+     Y+  +  L  +R+       L N    ++ L 
Sbjct: 157 ARASTL-------HGEKVEMLNH-----YKENESLLGEIRA------RLRNSRERMKFL- 197

Query: 193 SSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHI----- 244
               + + + +NL +    S+ D   L +QER +     E    I  Q++ LR I     
Sbjct: 198 ---HEQVKISENLLKDELTSRLDHLALLRQERKLQSDIDEDEAGITGQQSKLRQIENGIQ 254

Query: 245 ---NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTI 300
              N   ++A  E A+  ++   +L    R F D           R  +TIL +P  G +
Sbjct: 255 TLENRFVEQAKTE-ADKARQTLSELSHRLRKFDD-----------RAARTILRAPANGVV 302

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
               + +        + +M IVP      +   ++P  + HV+ G    +       +R 
Sbjct: 303 KAILNNTVGGVVGAGETVMDIVPMDDRLIVEGHLSPGDVGHVQIGQKGYITLASREGVRY 362

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
            +  A +  I P     + N QT  YY+V ++     F
Sbjct: 363 GRLNAEVVHISPDTFTNERNQQT--YYKVRMQTEGSTF 398


>gi|327393917|dbj|BAK11339.1| hypothetical protein PAJ_1259 [Pantoea ananatis AJ13355]
          Length = 471

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 79/358 (22%), Positives = 152/358 (42%), Gaps = 38/358 (10%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           HPA    M ++ I+ ++ LI+ S+   ++I V + G+++ +  V EI+   +G+++   V
Sbjct: 53  HPAPYWTMRIIVILTLV-LISISLFGRLDIVVVAKGKVIPDARVKEIQPAITGVVRHIYV 111

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           ++G ++  G  L+  +  +    +   + S       I   K+ LD         + +  
Sbjct: 112 DDGQRVNAGNVLMVLDSTQAEADLTKTEASRAESMLAIIRAKALLD--------AQISGH 163

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRS----LKMKLTRMRSIYLNRL-DLENKSSL 187
             E ++ D L +     +  F  GI   Y+        +LT+ R      L D+E   S 
Sbjct: 164 VPEMKVSDGLSQADVNATSRFADGIFMEYKDKLNRADAELTQHRDELATTLQDIERLKST 223

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             A L+  Q +    K L + + V++ND   +E+             H+      H NEL
Sbjct: 224 --APLAREQAN--SYKLLAKDHYVARNDYLDKEQTALGQE-------HDLTAKRSHANEL 272

Query: 248 YDEANLEFA-------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGT 299
               + + A        + +E    LEQ ++     +    +  KTR+Q   ++SP++GT
Sbjct: 273 KAAIDAQIAEKASVGSQFRREQLDALEQAEQKLKQSVED-EVKAKTRKQLLNLVSPVSGT 331

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           +      +       +Q +M+IVP   +  +   +  K I  +K+G  ATV+   FP+
Sbjct: 332 VQQLSVHTIGGVVTSAQKVMEIVPDDAME-VEVNIANKDIGFIKEGQNATVKIDAFPY 388


>gi|253998536|ref|YP_003050599.1| HlyD family type I secretion membrane fusion protein [Methylovorus
           sp. SIP3-4]
 gi|253985215|gb|ACT50072.1| type I secretion membrane fusion protein, HlyD family [Methylovorus
           sp. SIP3-4]
          Length = 442

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 85/436 (19%), Positives = 170/436 (38%), Gaps = 34/436 (7%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +++   ++++ + G   W+ + P+  +V + G+I    N   ++    GI+K+  V +G 
Sbjct: 24  VRKGMFMTVVIVGGFFLWASVAPLSGAVIAEGKIKIATNRKTVQHLEGGIVKQILVRDGD 83

Query: 77  QILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            +  G PLL  ED   +  +++   ++ ++      +  EK+    +     +L      
Sbjct: 84  VVKHGQPLLLLEDTRNSAELNILRDQQDALLAKEARLIAEKTMAGAIVFPQQLLVPMSTK 143

Query: 134 REE----QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           R+E    +   FL K      K+ N  I+ +   L+       S Y      E +   + 
Sbjct: 144 RQELINKERAQFLSK-----RKMLNDQIALLREELRHSKAE-SSAY------EAQVKAIE 191

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELY 248
             +   Q+ L M + L +KN V + D+     + Y+  L E  E +  Q   L       
Sbjct: 192 ENIRYRQEQLAMREGLMQKNFVGKADV-----LNYRQALTEKHEQLAAQSADLNGTRAKV 246

Query: 249 DEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E  L   +    Y++E   +L+       + + +L   E +  ++T+ +PI G ++  +
Sbjct: 247 SELELRVIDVKNRYIQEADAELKDTGNQLREVIERLRPAEDSMLRRTVTAPIDGQVMAMK 306

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q +M IVP S    +   V    I  V  G  A V+   Y         
Sbjct: 307 VTTVGGVVTPGQAMMDIVPVSDDLVVEVNVRNLDIDTVYPGQPAEVQLNAYNQRTTPMVT 366

Query: 365 A-IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
             ++      I  Q  +L T   Y   ++I   +  +  ++++  G P       ++ T+
Sbjct: 367 GEVVYVAGDAIEDQQTHLLT---YPAHVRIDKESLKNVQHVKIEPGMPVTAFIKTQDRTM 423

Query: 423 AQEIIHPITDNWPKIF 438
            + +I PIT      F
Sbjct: 424 LEYLISPITQRMRHTF 439


>gi|325294076|ref|YP_004279940.1| Proteases secretion protein prtE [Agrobacterium sp. H13-3]
 gi|325061929|gb|ADY65620.1| Proteases secretion protein prtE [Agrobacterium sp. H13-3]
          Length = 437

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 85/424 (20%), Positives = 173/424 (40%), Gaps = 31/424 (7%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           + GL  W+ L  +  +V ++G ++ E N  +I+    GI+ +  V  G  +  G  LL  
Sbjct: 29  LFGLGGWAALAKLSGAVVATGRVVVEGNSKKIQHLSGGIVSQINVAEGDTVEAGQVLLRL 88

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYH 146
               +  ++      ++N    +   ++ L     + ++ +  +F + E    D     +
Sbjct: 89  ----SGTIVQANLSIVENTLAQLYARRARL-----RAEISDATSFTTPE----DLAVLTN 135

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSH-------QKD 198
           S  +K F     +++ S +  L  M+   + R D L +++  +   + +        ++D
Sbjct: 136 SKAAKTFIDSEQNLFNSRRSALIGMKKQLVTRKDQLADEARGMDVQIEATNNELAIVRED 195

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN--IHEQKNMLRHINELYDEANLEFA 256
           ++  + L+ K  V+   LN  +R +  S LE ++   +  +   +  ++E+ D  +L+  
Sbjct: 196 VSKTRELYAKGLVTLQRLNLLKRQL--SNLEGQQGQYMAARAQTVGKLSEM-DLQSLQLD 252

Query: 257 NYLK-EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              K E+++DL   + T A+   +L       ++  I SPIAG I      + +   Q  
Sbjct: 253 EDRKSEVTKDLTSIEATVAEYEERLAATRDQLDRLDIRSPIAGRIYQLSVHNINGVIQPG 312

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + LM +VP  +   I A V P  I  +  G    +RF  +         A +  + P + 
Sbjct: 313 EVLMLVVPAKEDLAIDANVLPNDIDQIYVGQPVIIRFTAFNQSTTPDVSAEVAVVAPDL- 371

Query: 376 QQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            Q ++     +Y + +K +           L  G PAEV       ++    + P  D  
Sbjct: 372 -QTDSRSGASFYALRIKPSKTGMDHIPGGRLYPGMPAEVFIQTSERSVLSYFVKPFQDRL 430

Query: 435 PKIF 438
            K F
Sbjct: 431 RKTF 434


>gi|227357897|ref|ZP_03842244.1| type I secretion membrane fusion protein [Proteus mirabilis ATCC
           29906]
 gi|227161902|gb|EEI46924.1| type I secretion membrane fusion protein [Proteus mirabilis ATCC
           29906]
          Length = 419

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 90/449 (20%), Positives = 172/449 (38%), Gaps = 89/449 (19%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H   +N K  H  S   +T+L I  +I  + W+    +E      G I+       I++ 
Sbjct: 31  HAALQNEK--HHKSFMMITILLIFMVI-FVIWAWNSNLEEVTRGQGSIIPSSREQIIQTL 87

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDF 119
            +GI+K  QV+ G  + +G  LLT +D  T+ ++   +  + NL   R  +  E      
Sbjct: 88  DAGILKSMQVKEGDIVEKGQVLLTLDDTRTSAILRESEAKVANLEAIRARLKAEA----- 142

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                                    Y +  S  F  G+S+        +TR  ++Y  R 
Sbjct: 143 -------------------------YSTELS--FPEGLSTEL------VTRETTVYKIRK 169

Query: 180 D--------LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           D        L+   +LL        +++++ K +  + A+S  +L + ER     + +++
Sbjct: 170 DALKSGIDNLQQSKALL-------DREISITKPIVAQGAMSAVELLRMER----QSADIQ 218

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             I E+KN                  YL E   +L + +   A     +       E+  
Sbjct: 219 LQIDEKKN-----------------KYLTEAGAELVKTEAELAQARENMAGRADPVERAL 261

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P+ G +   +  +        Q +M+IVP      + A ++P+ + +V+ G  A V+
Sbjct: 262 IRAPLRGIVKNIRINTVGGVISAGQDIMEIVPLEDQLLVEAYISPRDVAYVRAGMPALVK 321

Query: 352 FPHYADIREKKFKAIIEKIDPII---SQQDNNL---QTQEYYEVILKITDLAFSDNN--- 402
              Y        + ++  + P      ++ ++L   Q + +Y V++       +D N   
Sbjct: 322 LTAYDYAIYGGLEGVVTLVSPDTLHDQKRPSDLKLNQDEAFYRVLVTTQSSHLTDKNGKE 381

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           + +  G  A V       T+ Q +I PIT
Sbjct: 382 LPVIPGMIASVDIKTGEKTVFQYLIKPIT 410


>gi|58616878|ref|YP_196077.1| alkaline protease secretion protein AprE [Ehrlichia ruminantium
           str. Gardel]
 gi|58416490|emb|CAI27603.1| Alkaline protease secretion protein aprE [Ehrlichia ruminantium
           str. Gardel]
          Length = 514

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 86/443 (19%), Positives = 178/443 (40%), Gaps = 41/443 (9%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +L   G+ G+  W+ + P++ SV + GE+++      ++    GII+K  V+ G  + 
Sbjct: 86  IVILLFFGVFGI--WAAVAPLDGSVVAQGEVISSSEKQIVQHLEGGIIEKILVKEGEFVE 143

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +  P++   +      +D+ K  + ++    +   +A+ +  N             +++ 
Sbjct: 144 KNQPIIYLHNTTAQANLDIIKERMLDMLA-TEARLTAIKYNYNHIKFPNSINNLSNKEIR 202

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ--- 196
           D + K      +     IS     L+ +  ++        +L   S+ L +  + HQ   
Sbjct: 203 DQIIKNQQQLFESHQKNISGQINILQQRTKQLHQ------ELSGLSAQLTSATTQHQLIN 256

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L   K+L     +S+  +   ER       E +  I + ++ +  +N+   E  LE  
Sbjct: 257 EELAAKKSLLADGYISKPYIIALER----QYAESQGKIGQIESAIASVNQKIGENKLEII 312

Query: 257 NYLK----EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           N       +IS +L+      AD   ++   +   ++  I SP +G I   +  +     
Sbjct: 313 NITNNVQNKISIELKDTISAIADLKERMKTAQDVLDRTVIRSPQSGIITGLKYHTEGGVI 372

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPHYAD 357
               P+  +VP      + AK+  + I+ +                KG  A VR   Y +
Sbjct: 373 PPGAPITNVVPSDDNLIVDAKIQTRNIEEILSAQAKEVNMVSYENYKGLKAKVRLSAY-N 431

Query: 358 IREKKFK-AIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLF 415
           IR+      I+ ++      + N ++   YY++ + I  + +    N+ L  G PAEV  
Sbjct: 432 IRKVGLANGIVTQVSADALTEANGMR---YYKIQVIIPKEQSKKLKNLRLYPGMPAEVFI 488

Query: 416 TAKNTTLAQEIIHPITDNWPKIF 438
             ++ TL   +  PIT  + K F
Sbjct: 489 ITQSRTLLNYLFTPITSTFEKAF 511


>gi|186681343|ref|YP_001864539.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186463795|gb|ACC79596.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 493

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 87/376 (23%), Positives = 169/376 (44%), Gaps = 54/376 (14%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +S+I + G I W+    I+   ++ GE++    V  + S   G I   +V+ G ++ +G 
Sbjct: 44  MSVI-VFGAIAWAYFSQIDEVATAPGELIASTQVRPVTSLGGGSIVGVKVQEGDRVTKGQ 102

Query: 83  PLLTFE-DIETTDLIDLKKVS--IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            L+  + D++ TD+  L K +  I++    +D E+        K    ++   SR   L 
Sbjct: 103 ILIQKDPDLQITDVSRLAKSTRLIQDDLQRLDAERLGGKTTGTKLQ--DELLTSR---LQ 157

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-------RSIYLN-RLDLENKSSL---L 188
           D+  +     ++  N  I+ + ++ K++LTR+       +S + N + +L N  S+   +
Sbjct: 158 DYQARQAGAEAEA-NRQIALINQA-KVRLTRLQDNLANAKSSFANAKTNLANADSIRIKI 215

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            + L+  Q+    ++ L    AV + D L+ QER+    T E+  +  E  N    I E 
Sbjct: 216 ESNLALAQEREKSLRTLITPGAVPRVDYLDAQERLTRAKT-EITRSQDEVTNAQNRITEA 274

Query: 248 YDE-ANLE--FANYLKEISRDLE-------QNQRTFADEMSKLTI--------------- 282
            D+  +LE   A   +EI +  +       Q QR  ++  S++                 
Sbjct: 275 QDKVTSLEKDIAAQAQEIHQAEQAYKAARSQAQRIASERQSEILTQFNKRKEELTTVQGQ 334

Query: 283 LEKTREQK---TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           LE+ R+Q+   TI +P+AGTI   +  ++    Q  + L+ I+P  +   +  KV  + I
Sbjct: 335 LEQARKQQALETIEAPVAGTIYRVK--ATKGPVQSGEELLSILPEGEEMLLEVKVLNRDI 392

Query: 340 QHVKKGYTATVRFPHY 355
             +++G  A V+   +
Sbjct: 393 GFIRQGMKAKVKMATF 408


>gi|313110585|ref|ZP_07796468.1| putative secretion protein [Pseudomonas aeruginosa 39016]
 gi|310882970|gb|EFQ41564.1| putative secretion protein [Pseudomonas aeruginosa 39016]
          Length = 395

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 121/276 (43%), Gaps = 39/276 (14%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNL-FEKNAVSQNDLNQQERIVYKS--------TLELREN 233
           N++S+LRA ++    ++   K++ F  +   +  L + ER ++KS        T  ++  
Sbjct: 110 NQASVLRAAIARLDAEVLGRKSIEFPPDVDPEGPLARSERELFKSRRDKLVEGTQAIQRQ 169

Query: 234 IHEQKNMLRHINELYDE------ANLEFANYLKEISRDLEQNQRTF--------ADEMSK 279
           IH  ++ L  +  L  +        L+ +  +  +S  L + + T+        A   + 
Sbjct: 170 IHLAQSQLDLVRPLVAKRAVSQMEALKLSQDIATLSGKLTELKSTYFQDAYTERAQRKAD 229

Query: 280 LTILEKTREQKT-------ILSPIAG---TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           L+ LE   +Q+        ILSP+ G   T++ N   +     Q  +P+M+++P  +   
Sbjct: 230 LSALEPIVQQRQDQLRRTEILSPVRGRVNTVLIN---TRGGVIQPGEPIMEVIPVEERLL 286

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + AK+ P+ +  +  G  A V+   Y        K  +E+I     ++D     + YY+V
Sbjct: 287 VEAKIKPRDVAFLVPGMPAKVKITAYDYTIYGDLKGTLEQISADTIEEDTPHGKESYYQV 346

Query: 390 ILKI--TDLAFSDNNIELRNGFPAEV-LFTAKNTTL 422
           ++K   + L   +  + +  G  AEV + + K + L
Sbjct: 347 LIKTDGSQLKRGEEVLPIIPGMVAEVDILSGKRSVL 382


>gi|289208493|ref|YP_003460559.1| hemolysin D [Thioalkalivibrio sp. K90mix]
 gi|288944124|gb|ADC71823.1| type I secretion membrane fusion protein, HlyD family
           [Thioalkalivibrio sp. K90mix]
          Length = 474

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 94/430 (21%), Positives = 181/430 (42%), Gaps = 49/430 (11%)

Query: 19  RMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R  L  I+  +GL+  W+ +  I+    + G ++   N+  ++S   G++ +  V  G  
Sbjct: 65  RALLYGILITLGLLVYWASVAEIDEVARADGRVIPSQNLQVLQSMDGGVVSEVLVREGDV 124

Query: 78  ILQGTPLLTFEDIETTDLIDLKKV-----SIKNLRCHIDTEKSALDFLNNKYDVLE--KA 130
           + QG  L+  +   T  L DL +      ++K  R  +    +   FL    D+ E  +A
Sbjct: 125 VEQGDVLVRVD--PTRFLSDLGEARASEFALKARRARLMALLTETPFLITP-DLQEGPQA 181

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              +E+QL      Y  +  +     + S  R  + ++ R R   LN +    +S  +RA
Sbjct: 182 IVEQEQQL------YEESLDE-----LRSRIRIAEEQM-RQRREELNEVRA-RRSQAIRA 228

Query: 191 L-LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           L L+S  ++L + + L +  AVS+ ++ +  R V  +    R +  +    +  ++   +
Sbjct: 229 LELAS--RELEVTEPLVQSGAVSEVEILRLRREVSNA----RGDRDQATAQIARLDAAIE 282

Query: 250 EANLEFANYLKEISRDLEQNQRT-FADEMSKLTILEKTREQ-------KTILSPIAGTIV 301
           EA       ++E+  +     R+  AD + +L  L +  E          + SP+AG + 
Sbjct: 283 EAE----EKIREVRLNFRNQWRSELADTLGRLQELAEGTEGLEDRVRLSEVRSPMAGIVQ 338

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +        + + ++VP      I A+V+P+ I +++ G  A V+F  Y      
Sbjct: 339 RMFITTRGGVISPGREVAEVVPLEDELLIEARVSPRDIAYLRPGLNAKVKFTAYDFAIYG 398

Query: 362 KFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              A +E I P  I+  D N     YY+V ++  +  F D    +  G   +V       
Sbjct: 399 GLDATVEHISPDTITDDDGNT----YYKVRVRTEETGF-DEEHPIMTGMVTQVDIITGRR 453

Query: 421 TLAQEIIHPI 430
           T+ Q ++ PI
Sbjct: 454 TILQYLLKPI 463


>gi|13472323|ref|NP_103890.1| metalloprotease transporter [Mesorhizobium loti MAFF303099]
 gi|14023069|dbj|BAB49676.1| metalloprotease transporter [Mesorhizobium loti MAFF303099]
          Length = 440

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 84/446 (18%), Positives = 173/446 (38%), Gaps = 39/446 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N++R   A      LL  +G  G   W++  P+  +V + G I      + I+ P  GII
Sbjct: 16  NIRRVAFAGYAATALL--VGCFGY--WAVSAPLSGAVITQGTISATGGNILIQHPEGGII 71

Query: 68  KKFQVENGSQILQGTPLLTFEDIET-TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +   V +G ++ Q   L+  +      +L  L + SI          ++  D L+    +
Sbjct: 72  EALLVHDGDRVQQAQDLIVLDPTAAQAELNRLTRQSIALR-AAAARLEAERDGLDRLAPI 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNR 178
            + A  S +                 F   I    +    +L R RS        + ++R
Sbjct: 131 TKPAPASLQAD---------------FEALIREQQKEFDARLARFRSEQSILAQRVAMHR 175

Query: 179 ---LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
              + L+++   ++      +K+L +   L +K   ++ + +Q  R       +      
Sbjct: 176 QSVVGLQSQKEAVQQQAEIVKKELGIKTGLLDKGLTNRTEYSQLLRSEADLVGQAGALEA 235

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
                   I E  ++        ++E    L++ +   AD   ++   E    + TI +P
Sbjct: 236 NLAAANTQIVEAQEQIERLTTQRVEEALTKLDEVRSNLADVEEQIRAAEAVLRRTTIKAP 295

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            AG +V +   +  +   + + +M+I+P +    + A++ PK +  V+ G  A +R    
Sbjct: 296 AAGIVVSSTYNTKGSVIARGEKIMEILPTAPGLIVDARLRPKDVDQVRVGQPAKLRLSAL 355

Query: 356 ADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKI-TDLAFSDNNIELRNGFPAE 412
                 +  A + +I  D +I +  +    + Y+ V L+I  DL       +L  G P E
Sbjct: 356 NMRLTPEVSATVAQISADRLIDEATH----EPYFRVKLRIAADLPPGVKPGQLYPGTPVE 411

Query: 413 VLFTAKNTTLAQEIIHPITDNWPKIF 438
                 + T  + ++ P+ D++ + F
Sbjct: 412 AFINTGDRTFFEYLVRPMLDSFARAF 437


>gi|15597074|ref|NP_250568.1| secretion protein [Pseudomonas aeruginosa PAO1]
 gi|107101311|ref|ZP_01365229.1| hypothetical protein PaerPA_01002345 [Pseudomonas aeruginosa PACS2]
 gi|218892165|ref|YP_002441032.1| putative secretion protein [Pseudomonas aeruginosa LESB58]
 gi|254234971|ref|ZP_04928294.1| hypothetical protein PACG_00849 [Pseudomonas aeruginosa C3719]
 gi|9947867|gb|AAG05266.1|AE004613_11 probable secretion protein [Pseudomonas aeruginosa PAO1]
 gi|126166902|gb|EAZ52413.1| hypothetical protein PACG_00849 [Pseudomonas aeruginosa C3719]
 gi|218772391|emb|CAW28173.1| probable secretion protein [Pseudomonas aeruginosa LESB58]
          Length = 395

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 121/276 (43%), Gaps = 39/276 (14%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNL-FEKNAVSQNDLNQQERIVYKS--------TLELREN 233
           N++S+LRA ++    ++   K++ F  +   +  L + ER ++KS        T  ++  
Sbjct: 110 NQASVLRAAIARLDAEVLGKKSIEFPPDVDPEGPLARSERELFKSRRDKLVEGTQAIQRQ 169

Query: 234 IHEQKNMLRHINELYDE------ANLEFANYLKEISRDLEQNQRTF--------ADEMSK 279
           IH  ++ L  +  L  +        L+ +  +  +S  L + + T+        A   + 
Sbjct: 170 IHLAQSQLDLVRPLVAKRAVSQMEALKLSQDIATLSGKLTELKSTYFQDAYTERAQRKAD 229

Query: 280 LTILEKTREQKT-------ILSPIAG---TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           L+ LE   +Q+        ILSP+ G   T++ N   +     Q  +P+M+++P  +   
Sbjct: 230 LSALEPIVQQRQDQLRRTEILSPVRGRVNTVLIN---TRGGVIQPGEPIMEVIPVEERLL 286

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + AK+ P+ +  +  G  A V+   Y        K  +E+I     ++D     + YY+V
Sbjct: 287 VEAKIKPRDVAFLVPGMPAKVKITAYDYTIYGDLKGTLEQISADTIEEDTPHGKESYYQV 346

Query: 390 ILKI--TDLAFSDNNIELRNGFPAEV-LFTAKNTTL 422
           ++K   + L   +  + +  G  AEV + + K + L
Sbjct: 347 LIKTDGSQLKRGEEVLPIIPGMVAEVDILSGKRSVL 382


>gi|306812110|ref|ZP_07446308.1| type I secretion membrane fusion protein [Escherichia coli NC101]
 gi|305854148|gb|EFM54586.1| type I secretion membrane fusion protein [Escherichia coli NC101]
          Length = 415

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 81/428 (18%), Positives = 168/428 (39%), Gaps = 78/428 (18%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEIL--NEDNVVEIKSPFSGIIKKFQVENGSQ 77
           M +  ++ ++  + W+   P++      G I+  + + V++   P  GI+K  +V  G  
Sbjct: 41  MVIFLLVLVVTFVIWAWNSPLDEVTRGQGSIIPGSREQVIQTLDP--GILKTLEVREGDI 98

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFE 132
           + +G  LLT +D  ++ ++   +  + NL     R   +    +L F ++    +     
Sbjct: 99  VEKGQVLLTLDDTRSSAMLRESEARVNNLEAVRARLRAEAYSESLTFPDD----VPADLR 154

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            RE                      S+VYR  K +L   +SI      L+   +LL    
Sbjct: 155 ERE----------------------STVYRLRKTELA--QSIA----GLKQSKALL---- 182

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
               K++ M + +  + A+S+ +L + +R     + EL+  + E++N             
Sbjct: 183 ---DKEIAMTRPIVREGAMSEVELLRMQR----QSAELQLQMDEKQN------------- 222

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                YL E   +L + +   A     +       E+  I +P+ G +   +  +     
Sbjct: 223 ----KYLTEAGAELVKTEAELAQAKENMAGRADPVERSRIRAPLRGIVKNIRVNTLGGVV 278

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              Q +M+I+P      I A + P+ + +V+ G  A V+   Y          ++  + P
Sbjct: 279 SAGQDIMEIIPLEDQLLIEAYINPRDVAYVRTGMPALVKLTAYDYAIYGGLDGVVILVSP 338

Query: 373 II---SQQDNNLQ---TQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLA 423
                 ++  +L+    + YY V++  ++   +D N   + +  G  A V       ++ 
Sbjct: 339 DTLRDQKRPGDLKLDPNEAYYRVLVTTSNNYLTDRNGKILPVIPGMIASVDIKTGQKSVF 398

Query: 424 QEIIHPIT 431
           Q +I PIT
Sbjct: 399 QYLIKPIT 406


>gi|298487509|ref|ZP_07005553.1| ABC-type protease exporter, membrane fusion protein (MFP) family
           component PrtE/AprE [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298158024|gb|EFH99100.1| ABC-type protease exporter, membrane fusion protein (MFP) family
           component PrtE/AprE [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 445

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/428 (18%), Positives = 159/428 (37%), Gaps = 35/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G      W+ L P++  +S  G ++       ++S   G++ K  V  G  + +G
Sbjct: 27  ILMLAGAGSFFLWASLAPLDQGISVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQSVKEG 86

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLD 140
            PL   +  +        +  +++LR       ++L    ++ D L++  F +  E +  
Sbjct: 87  EPLFRLDQTQV-------EADVQSLRAQYRMAWASLGRWQSERDNLDEVHFPA--ELIAA 137

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALL 192
             G+       +   G   ++ S +  L R +S          L    +    S L A  
Sbjct: 138 GQGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQA 197

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S +K L+ ++ L +   +  N L + +R + +    L +N  E   + + I E      
Sbjct: 198 DSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQGIVESRLRLQ 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQS 305
            +   Y KE+       +  +AD   K   LE+       + +   IL+P  G  V    
Sbjct: 258 QQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNLGV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + L++IVP      +  ++  + I  V       + F  +   R  +   
Sbjct: 311 HTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVSG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     Q  +    Q YY +   + D A    N + ++ G PAE+       +L  
Sbjct: 371 EVNLIS--ADQMQDEKTGQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTGERSLLN 428

Query: 425 EIIHPITD 432
            +  P+ D
Sbjct: 429 YLFKPLLD 436


>gi|116049831|ref|YP_791362.1| putative secretion protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115585052|gb|ABJ11067.1| putative secretion protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 395

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 121/276 (43%), Gaps = 39/276 (14%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNL-FEKNAVSQNDLNQQERIVYKS--------TLELREN 233
           N++S+LRA ++    ++   K++ F  +   +  L + ER ++KS        T  ++  
Sbjct: 110 NQASVLRAAIARLDAEVLGKKSIEFPPDVDPEGPLARSERELFKSRRDKLVEGTQAIQRQ 169

Query: 234 IHEQKNMLRHINELYDE------ANLEFANYLKEISRDLEQNQRTF--------ADEMSK 279
           IH  ++ L  +  L  +        L+ +  +  +S  L + + T+        A   + 
Sbjct: 170 IHLAQSQLDLVRPLVAKRAVSQMEALKLSQDIATLSGKLTELKSTYFQDAYTERAQRKAD 229

Query: 280 LTILEKTREQKT-------ILSPIAG---TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           L+ LE   +Q+        ILSP+ G   T++ N   +     Q  +P+M+++P  +   
Sbjct: 230 LSALEPIVQQRQDQLRRTEILSPVRGRVNTVLIN---TRGGVIQPGEPIMEVIPVEERLL 286

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + AK+ P+ +  +  G  A V+   Y        K  +E+I     ++D     + YY+V
Sbjct: 287 VEAKIKPRDVAFLVPGMPAKVKITAYDYTIYGDLKGTLEQISADTIEEDTPHGKESYYQV 346

Query: 390 ILKI--TDLAFSDNNIELRNGFPAEV-LFTAKNTTL 422
           ++K   + L   +  + +  G  AEV + + K + L
Sbjct: 347 LIKTDGSQLKRGEEVLPIIPGMVAEVDILSGKRSVL 382


>gi|167588370|ref|ZP_02380758.1| ABC antibiotic efflux pump, membrane fusion protein, HlyD subfamily
           [Burkholderia ubonensis Bu]
          Length = 419

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 82/399 (20%), Positives = 151/399 (37%), Gaps = 65/399 (16%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+++    V+ +  P +G +++ +V  G ++  G PL+T      T L D +++    +R
Sbjct: 61  GQLVPSAGVLNVSPPVTGTVERIEVREGQRVRAGDPLITVSAEVATSLGDAREM----VR 116

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++T++  L    +   VL        E+ +  L    +T  +          R L+M+
Sbjct: 117 TQLETQRERLRSDLSGQTVL-------AEEAIRGLKDRAATLERQL--------RELQMQ 161

Query: 168 LT-RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
            T R+R + L R  LE                L+MM+    +   S + ++QQE  V  +
Sbjct: 162 HTHRVRQVELARSQLEK---------------LSMMRT---QGYASNSQVDQQEASVLDA 203

Query: 227 TLELRENIHEQ---KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              L++++  Q   +  L    +   E  L       E+ R L + ++          I+
Sbjct: 204 EARLQDSVRAQLDVQGQLIQARQQLREQPLNARQQRNEMGRKLAETEQ---------AIV 254

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E    +  +L   A  +V    F         Q    ++P       +  V  + I  + 
Sbjct: 255 ENEARRSVVLRAPADGVVGAILFKVGQIINAGQTAASVLPADGRLEAQLMVPSRAIGFIH 314

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPI----ISQQD-------NNLQTQEY-YEVIL 391
            G T  +R+  Y     +KF     ++  I    +S Q+        N+Q Q Y   V L
Sbjct: 315 PGQTVVLRYEAYP---YQKFGQQYGRVSGISRSALSPQEVATLTGQPNVQEQHYRLTVAL 371

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              D+A  D    LR G   +        TL + ++ PI
Sbjct: 372 DRQDIAVYDRTERLRPGMALDADLLLDRRTLIEWVLEPI 410


>gi|94265132|ref|ZP_01288896.1| Type I secretion membrane fusion protein, HlyD [delta
           proteobacterium MLMS-1]
 gi|93454371|gb|EAT04672.1| Type I secretion membrane fusion protein, HlyD [delta
           proteobacterium MLMS-1]
          Length = 463

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 83/446 (18%), Positives = 183/446 (41%), Gaps = 48/446 (10%)

Query: 14  PASLKRMTLLS-------IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           P+S  R  +L+       ++G +G+  ++ +  I  +V + G +  + N   ++    GI
Sbjct: 32  PSSDPRRVVLAGLLVIFLVVGGVGV--YAAVAEITAAVIAVGNVKVDSNRQTVQHLEGGI 89

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  V NG Q+ +G  LL  E  +    +DL    ++  R ++   K+ L+   ++   
Sbjct: 90  VREILVSNGDQVRKGDVLLRLETEQVVATVDL----LRGQRDYLLARKARLEAERDQIPK 145

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           ++   E +E   L  + +     +K+F+  + ++   +++   ++  + +    L N+ +
Sbjct: 146 IDWPEELQERAHLPNVAEVMEGENKIFHSRLRTMANEIELIEAQLEQLQVRTASLGNQIA 205

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDL-----------NQQERIVYKSTLELRENIH 235
               +++S ++++     L  +  + +  L           +++E ++ +   + RE I 
Sbjct: 206 STERVIASLEEEVEAKAPLVAERFLERTHLLELSRTLESHQSRREELIGERA-QTRERIA 264

Query: 236 EQKNMLRHINELY-DEANL---EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E +  + +I   Y +EAN    E  N L E    LE   R   D+  +L           
Sbjct: 265 ELRLNIENIRNRYQEEANTTLGEVQNSLFE----LEDRLRPALDQARRL----------D 310

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I++P+ G +V  Q  S        + L+ I+P      + A++   QI  V  G  A + 
Sbjct: 311 IVAPVDGVVVDRQVHSPGGVIGPGEKLLDILPTGSPLVVEAQIDVDQISRVHPGLNAELV 370

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI----TDLAFSDNNIELRN 407
              +      + +  +  +      ++       +Y V ++I       A  D  + L  
Sbjct: 371 LMAFKQRTTPRAQGTVTYVSADRLTEETAAGPMPHYLVEIEIDRDSVRRAVGDETL-LTA 429

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDN 433
           G P EV       T+   ++ P+TD 
Sbjct: 430 GMPVEVYIQTGARTILAYLLEPLTDG 455


>gi|326326122|ref|YP_004250932.1| putative RTX Secretion protein (RtxD) [Vibrio nigripulchritudo]
 gi|323669174|emb|CBJ93231.1| Putative RTX Secretion protein (RtxD) [Vibrio nigripulchritudo]
          Length = 467

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/361 (20%), Positives = 157/361 (43%), Gaps = 36/361 (9%)

Query: 9   LKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L +  P+   R+T +S+ IG++  + W+    +++  ++SG ++       I+S     +
Sbjct: 45  LSQRPPSPFARVTAISLSIGVVMALLWAYWGKLDVQATASGRLVVSGRSQVIQSYEQSRV 104

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V +G  + +GTPLLT + +     I          R    +E    + L  +  V 
Sbjct: 105 IAIHVADGQLVSKGTPLLTLDTLGVNQEIS---------RLLTQSEFQTHEMLRYEALVD 155

Query: 128 EKAFESR-------EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
            +  E+         EQ L  L  Y S   + F   +++++   +M++ R     ++++ 
Sbjct: 156 NQPLENHATFLALPHEQQLQLLNSYQSE-KREFEATLANIH--AEMQVNR-----VSQVA 207

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            ++    L AL+++  + L   + L + + + + +  +QE    K  LE +  + +Q   
Sbjct: 208 RQSDIDALSALVTNISERLAARQALNQVHVIGKVEYLEQE----KELLETQREVTQQTAQ 263

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTREQ---KTILSPI 296
           L+ ++  Y     + + +  +  R   + QR    +++ LT  L K RE+   + + SP+
Sbjct: 264 LKVLHSQYLSLEEKLSGFKVQQQRQWLEKQRQARLQLTALTQELSKVREREQLEIVRSPV 323

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FP 353
            GTI      +     Q +Q LM IVP + +     ++  K +  +  G   T++   FP
Sbjct: 324 NGTIQQLSVHTLGAVLQPAQNLMVIVPDNTVKLAEVQILNKDVGFIHSGQPVTIKVDAFP 383

Query: 354 H 354
           +
Sbjct: 384 Y 384


>gi|320158798|ref|YP_004191176.1| RTX toxin transporter [Vibrio vulnificus MO6-24/O]
 gi|319934110|gb|ADV88973.1| RTX toxin transporter [Vibrio vulnificus MO6-24/O]
          Length = 453

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 74/372 (19%), Positives = 160/372 (43%), Gaps = 40/372 (10%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T +++ IG++  + W+    +++  +++G ++     
Sbjct: 20  HHYEFLPAHLALAQKPPSPFARLTAITLSIGVLAALLWAYWGKLDVQATATGRLVVSGRS 79

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI----ETTDLIDLKKVSIKNLRCHIDT 112
             I+S     +    V +G ++ +G PLLT + +    + T LI   +     L  +   
Sbjct: 80  QVIQSYEQSRVMSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLITQSEFQTNELIRY--- 136

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  LN++  V +  F +   +    + + + +  + F+  ++S+  S +MK+    
Sbjct: 137 ----RTLLNDQPLVQDPMFTALPTEQQALINENYLSEKREFDATLASI--SAEMKV---- 186

Query: 173 SIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
               NR     + S + AL+   +   + L   K L +   +   +  +QE    K  LE
Sbjct: 187 ----NRTSQAARQSDINALIQLTENISQRLAARKTLNQVKVIGHVEYLEQE----KELLE 238

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTRE 288
           ++  + +Q+  L+ +   Y         +  +  R+  + +R    +++ L   L K RE
Sbjct: 239 VQRQVAQQRAELQVLKSQYQSLEERQTGFKAQKHREWLEKRRQAKLQLAALNQELSKVRE 298

Query: 289 QKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           ++    I SP+ GT+     ++     Q +Q LM IVP + +     ++  K +  V  G
Sbjct: 299 REQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENSVQLAEVQILNKDVGFVYPG 358

Query: 346 YTATVR---FPH 354
            + TV+   FP+
Sbjct: 359 QSVTVKVDAFPY 370


>gi|144897238|emb|CAM74102.1| Type I secretion membrane fusion protein, HlyD [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 419

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/258 (18%), Positives = 103/258 (39%), Gaps = 16/258 (6%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + L RA  S   +++ + +  +E   V   ++ + ER      L L   +   ++ +  +
Sbjct: 157 AGLARAQ-SKGAEEMHIKRKAYEVGVVGNQEIVKLER----EQLMLDTEVSTARDTISRL 211

Query: 245 NELYDEANLEFANYLK----EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                EA+ +   + K    E+  ++ + +   A   + + +      +  + SP+ G +
Sbjct: 212 QAQLAEADAKLNEFEKGWRTEVLEEISKAEAEIAALKATMEVATDRESRSEVRSPVRGVV 271

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 S    A+    LM IVP      + AKV P+ I H+++G  A +R   Y   R 
Sbjct: 272 KMAAITSVGQVAKPGDTLMDIVPLDDALVVEAKVPPQDIGHLREGLAARIRLSAYDPFRY 331

Query: 361 KKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLF 415
            +    +  +  D I   Q N + T  YY+V+++      +D   +   +R+G       
Sbjct: 332 GQLPGRVLAVGADSIEETQGNTVNT--YYKVVIQSDQAVLTDGKGQVHAVRSGMAGTASI 389

Query: 416 TAKNTTLAQEIIHPITDN 433
                ++ + +  P+  N
Sbjct: 390 IIGRKSILRMVFDPLLRN 407


>gi|50120035|ref|YP_049202.1| putative type I secretion protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49610561|emb|CAG74006.1| putative type I secretion protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 389

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/382 (20%), Positives = 149/382 (39%), Gaps = 74/382 (19%)

Query: 23  LSIIGIIGLITWSILLPI-EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LS++G+I    W+    + E+SV + G++        I+S   GII +  V+ G+ + +G
Sbjct: 23  LSLLGLIVFFIWAKFAVLDEVSVGT-GKVTPSTRAQVIESLDGGIIGQLYVQQGNVVEKG 81

Query: 82  TPLLT-----FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
             L       F+ +       ++ +     R H +     L F  +   + E A  +RE 
Sbjct: 82  QVLAQLDINRFQSVYGEAFSRVQTLRASAERLHAELSGEPLKF--SAETMKEPALATRER 139

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           QL +                            +R+R+      +L+    L+       +
Sbjct: 140 QLYE----------------------------SRLRNRDETVANLQQSMRLV-------E 164

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L M + L ++ A S  ++           + LR  I E +  +       DEA  ++A
Sbjct: 165 QELRMTEPLVQRGAASAVEV-----------IRLRRQITEIRGKI-------DEARNQYA 206

Query: 257 NYLKEI----SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              +E     + DLE  +   + +  +L       ++ TI SP+ G +   Q  +     
Sbjct: 207 VRAREEQVKNNADLEAQREVVSGKADQL-------KRATITSPVRGIVKDIQVTTVGGVL 259

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           Q    LM+IVP      I  ++ P+ I +++ G  ATV+   Y           +E + P
Sbjct: 260 QPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKITAYDSSIYGNLTGEVESVSP 319

Query: 373 IISQQDNNLQTQEYYEVILKIT 394
             + QD   + Q YY V ++ T
Sbjct: 320 -DTLQDEVRRDQFYYRVYVRTT 340


>gi|117918837|ref|YP_868029.1| HlyD family type I secretion membrane fusion protein [Shewanella
           sp. ANA-3]
 gi|117611169|gb|ABK46623.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           sp. ANA-3]
          Length = 460

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/380 (21%), Positives = 154/380 (40%), Gaps = 58/380 (15%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI--- 90
           W+    ++   + SG+++    V  I+S   GI+++  V  G  + +G PL+  +D    
Sbjct: 45  WAGFAKLDKVTTGSGKVIPSSQVQVIQSLDGGIMQELFVREGDIVTKGQPLVRIDDTRFR 104

Query: 91  -----ETTDLIDLKKVSIKNLRCHIDT----------------EKSALDFLNNKYDVLEK 129
                +  +++ LK  +I+ +R  +D+                 K AL F ++  +  E 
Sbjct: 105 SDFAQQEQEVLGLKTNAIR-MRAELDSILISDMTSDWREQVKITKKALVFPDSITEA-EP 162

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A   R+++               +N  + ++   L++ + +++       DL +K++ L 
Sbjct: 163 ALVRRQQE--------------EYNGRLDNLSNQLEILVRQIQQRQQEIDDLASKTTTLT 208

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR----HIN 245
             +    ++L + + L +K  V + +L + ER V  +  EL        N LR     + 
Sbjct: 209 TSMQLISRELELTRPLAKKGIVPEVELLKLERAVNDAQGEL--------NSLRLLRPKLK 260

Query: 246 ELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTI 300
              DEA L+       Y  ++   L + Q T    M++  +  + +  K ++ SP+ GTI
Sbjct: 261 AALDEAILKRREAVFVYAADLRAQLNETQ-TRLSRMNEAQVGAQDKVSKAVITSPVNGTI 319

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 +     Q    +++IVP      I  K+ PK I  +  G  A V+   Y   R 
Sbjct: 320 KTVHINTLGGVVQPGVDIIEIVPSEDQLLIETKILPKDIAFLHTGLPAVVKVTAYDFTRY 379

Query: 361 KKFKAIIEKIDPIISQQDNN 380
              K  +E I    SQ D  
Sbjct: 380 GGLKGTVEHISADTSQDDEG 399


>gi|7416118|dbj|BAA93710.1| hemolysin D [Escherichia coli]
          Length = 479

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 82/362 (22%), Positives = 152/362 (41%), Gaps = 55/362 (15%)

Query: 31  LITWSILL------------PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            + WSILL             +E+   ++G+  +     EIK   + I++K  V++G+ +
Sbjct: 59  FVIWSILLFVIISLLLSVLGKVEVVSVANGKFTHSGRSKEIKPIENAIVEKIMVKDGAFV 118

Query: 79  LQGTPL--LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-----YDVLEKAF 131
            +  PL  LT   +E+                  D  KS    L  K     Y +L ++ 
Sbjct: 119 KKNDPLVELTVPGVES------------------DILKSEASLLYEKTEQYRYAILSESI 160

Query: 132 ---ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL---TRMRSIYLNRLDLENKS 185
              E  E ++ DF G   +   + F   +SS+ +   M        + + LN+  +E  +
Sbjct: 161 QRNELPEIRITDFPGGEDNAGGEHFQR-VSSLIKEQFMTWQNRKNQKQLTLNKKIVERDA 219

Query: 186 SLLRALLSSHQ-----KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +L R  L  HQ     + L   K L  K AVSQ+ + +QE    ++  E    + +   +
Sbjct: 220 ALARVSLYEHQVSQEGRKLNDFKYLLNKKAVSQHSVMEQENSYIQAKNEHAVWLAQVSQL 279

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT---ILSPIA 297
            + I  + +E  LE   +  EI   +E+++++  + +     LEK R++K    I +P++
Sbjct: 280 EKEIELVREELALETNIFRSEI---IEKHRKSTDNIVLLEHELEKNRQRKASSFIKAPVS 336

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+      +       ++ LM IVP + +  + A V  K I  ++ G    ++   Y  
Sbjct: 337 GTVQELNIHTEGGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQPGQEVVIKVDAYPY 396

Query: 358 IR 359
            R
Sbjct: 397 TR 398


>gi|91223834|ref|ZP_01259098.1| putative RTX transport protein [Vibrio alginolyticus 12G01]
 gi|269966434|ref|ZP_06180518.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91191326|gb|EAS77591.1| putative RTX transport protein [Vibrio alginolyticus 12G01]
 gi|269828891|gb|EEZ83141.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 436

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 83/378 (21%), Positives = 163/378 (43%), Gaps = 44/378 (11%)

Query: 1   MHHFMWKNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEI 59
           M    W N    H A+  R +  LS   ++ +I W+    ++  V   G+++   +V  I
Sbjct: 1   MSTVRWSN---AHLANRSRTLIWLSAALVLSVIIWASWARLDEVVVGEGKVVPTLSVQTI 57

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDT 112
           +S   GI+K+  V  G  + +G  +   +D        ET++ ++      + L+  ++T
Sbjct: 58  QSLEGGILKELLVMPGESVTKGQTIAILDDTRFKSTYSETSEQVESLLARKQRLQIELET 117

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST-CSKVFNY-----GISSVYRSLKM 166
            K     L+ K  V      S E Q  D     HS   +   NY      + S     K+
Sbjct: 118 VKVNSLQLDWKQQV------SIEPQPFDISMTGHSAYLNAKANYLERLSQLESELEEAKL 171

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           ++ +    YL+ L   N    L++ L    K+  M++ +    AV++ +L +  R V K 
Sbjct: 172 RIEQQSQAYLDTL---NTIQTLKSSLVIVSKERDMLREVVSSGAVAEVELLKLNRDVIK- 227

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L+ +I   +   +    +Y E+    A+Y         + Q    + +++L  L ++
Sbjct: 228 ---LKGDIASSQAAAQKQRAVYSES---IADYRGTALAFRAEAQGQLNEVVTQLAQLNES 281

Query: 287 RE-------QKTILSPIAGTI--VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           R+       +  +LSP+ GTI  V+ ++       +  +P+++IVP +    + A+++P+
Sbjct: 282 RQAIADQLNRTQLLSPVDGTIKDVFVRTIG--GVVKPGEPILEIVPRNSTLIVEARISPQ 339

Query: 338 QIQHVKKGYTATVRFPHY 355
            I  ++ G  ATV+   Y
Sbjct: 340 NIAFIRPGLPATVKLSAY 357


>gi|254452569|ref|ZP_05066006.1| type I secretion membrane fusion protein, HlyD [Octadecabacter
           antarcticus 238]
 gi|198266975|gb|EDY91245.1| type I secretion membrane fusion protein, HlyD [Octadecabacter
           antarcticus 238]
          Length = 420

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 75/177 (42%), Gaps = 16/177 (9%)

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +L +N+ T   ++++L I           +P+ G +   Q F S    Q + PL+ IVP 
Sbjct: 254 ELRENRTTLVRQLARLEIR----------APVGGIVYGLQVFGSGVVIQPADPLLFIVPQ 303

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-DNNLQT 383
            +   I A+V P  I  +  G    VRF     + ++    +  K+  + +    +N  +
Sbjct: 304 DRPLVIAAQVAPTDIDVLTIGQEVAVRFSA---LDQRTTPELYGKVALVSADAFTDNANS 360

Query: 384 QEYY--EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             YY  E+ L   +LA   +N  L  G P E      N T    ++ P++    ++F
Sbjct: 361 ASYYRAEITLNDGELARLPSNATLIPGMPVEAFIRTANRTPFNYLLKPLSGYIARMF 417


>gi|307321367|ref|ZP_07600766.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|306893012|gb|EFN23799.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
          Length = 439

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/433 (18%), Positives = 177/433 (40%), Gaps = 33/433 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +++L++  + G+  W+    +  ++ + G ++ +DNV +++    GI+ +  V+ G ++ 
Sbjct: 23  VSVLALALVAGVGGWAATTELSSAIVAGGVVIVDDNVKKVQHLTGGIVGELLVKEGDRVE 82

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            G  L+  +       + + + ++      R  +  E+           +   +FE  EE
Sbjct: 83  AGQVLIRLDGTTVRANLAIIESTLAQFYARRARLQAER-----------IGAASFEI-EE 130

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-----DLENKSSLLRAL 191
            L +F+     T +     G   ++ S +  L+ M+    +R      ++E  +  L A+
Sbjct: 131 DLAEFI---PGTAAAKLIEGEKRLFASRRSALSGMKGQLDSRKAQLADEVEGLTVQLNAI 187

Query: 192 ---LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH-EQKNMLRHINEL 247
              L    ++LT + +LF +  V    +   +R   ++ LE     H   +   R  +  
Sbjct: 188 EEALKLIAEELTGVDSLFGQGLVPMQRVTTLKR--QRAELEGGRGRHIAARAQARGKSSE 245

Query: 248 YDEANLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            D   L+   +   EIS++L   +   A+   + T       +  I +P++G I    + 
Sbjct: 246 IDLQILQLDEDRRSEISKELTDVEAKIAEYEERRTAATDQLRRLDITAPLSGRIYQLATH 305

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           + +      + LM +VP ++   + AKV    I  ++ G T  +RF  +      + +A 
Sbjct: 306 TVNGVINPGETLMLVVPEAEDLTVEAKVATHDIDQIRVGQTVEIRFSAFNQRTTPEVEAE 365

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  + P +   +       YY + ++    + +    + L  G PAEV     + T+   
Sbjct: 366 VVTVAPDLVTDERT--GASYYPLRIRPKAESLAKLKGLSLYPGMPAEVFIKIADRTVISY 423

Query: 426 IIHPITDNWPKIF 438
           +  P+TD     F
Sbjct: 424 LTKPLTDQMRHAF 436


>gi|37676695|ref|NP_937091.1| RTX toxin transporter [Vibrio vulnificus YJ016]
 gi|37201238|dbj|BAC97061.1| RTX toxin transporter [Vibrio vulnificus YJ016]
          Length = 467

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/372 (19%), Positives = 160/372 (43%), Gaps = 40/372 (10%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T +++ IG++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQKPPSPFARLTAITLSIGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI----ETTDLIDLKKVSIKNLRCHIDT 112
             I+S     +    V +G ++ +G PLLT + +    + T LI   +     L  +   
Sbjct: 94  QVIQSYEQSRVMSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLITQSEFQTNELIRY--- 150

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  LN++  V +  F +   +    + + + +  + F+  ++S+  S +MK+    
Sbjct: 151 ----RTLLNDQPLVQDPMFTALPTEQQALINENYLSEKREFDATLASI--SAEMKV---- 200

Query: 173 SIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
               NR     + S + AL+   +   + L   K L +   +   +  +QE    K  LE
Sbjct: 201 ----NRTSQAARQSDINALIQLTENISQRLAARKTLNQVKVIGHVEYLEQE----KELLE 252

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTRE 288
           ++  + +Q+  L+ +   Y         +  +  R+  + +R    +++ L   L K RE
Sbjct: 253 VQRQVAQQRAELQVLKSQYQSLEERQTGFKAQKHREWLEKRRQAKLQLAALNQELSKVRE 312

Query: 289 QKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           ++    I SP+ GT+     ++     Q +Q LM IVP + +     ++  K +  V  G
Sbjct: 313 REQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENSVQLAEVQILNKDVGFVYPG 372

Query: 346 YTATVR---FPH 354
            + TV+   FP+
Sbjct: 373 QSVTVKVDAFPY 384


>gi|83951080|ref|ZP_00959813.1| type I secretion membrane fusion protein, HlyD family protein
           [Roseovarius nubinhibens ISM]
 gi|83838979|gb|EAP78275.1| type I secretion membrane fusion protein, HlyD family protein
           [Roseovarius nubinhibens ISM]
          Length = 412

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/426 (18%), Positives = 179/426 (42%), Gaps = 37/426 (8%)

Query: 30  GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
           G  +W++L  I  +V ++G+I  + N   ++ P  G++ +  V+ G+ +  G  L+  + 
Sbjct: 5   GFGSWAVLTNIAGAVIANGQIEVDQNRQVVQHPDGGVVAEILVDEGTAVEVGDVLIRLDA 64

Query: 90  IETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQ-LLDFLGKY 145
            + T  + + +  +      R  ++ E+     +     +L  A  +   Q ++D   + 
Sbjct: 65  TQLTSQLTITENQLAEFMARRGRLEAERDGRSEITFDPMLLSVATRANSAQAMMDGQIRL 124

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           H+  ++        + +  +    ++  I   R  L  +  L+        ++LT  ++L
Sbjct: 125 HAARAETIAQESEQLEKRRQQTQDQIGGIVAQRRALARQIELI-------GEELTAQQSL 177

Query: 206 FEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHIN----ELYDEANLEFANY 258
           F+K     +    L ++E  +  +  EL  +  + +  +  IN     L      E    
Sbjct: 178 FDKGLAQSSRILALQREEARLSGTLGELDASKAQAEGRITEINIELLRLTSARREEAITT 237

Query: 259 LKEIS-RDLEQNQRTFA--DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           L+++  R+LE +++  A  +++S+L           IL+P+ G +     F+  +  + +
Sbjct: 238 LRDLQFRELEMHEQRLALSEQLSRL----------DILAPVPGIVHGLTVFAPRSVLRPA 287

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            P++ IVP  +   I A+V P     V  G   ++RF   + + +++   +  ++  I +
Sbjct: 288 DPVLFIVPQDRPLVIAAQVDPLHRDQVFVGQEVSLRF---SALDQRETPELFGQVAQISA 344

Query: 376 QQDNNLQTQ-EYY--EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
               +  T+  YY  E+ L   + A    +++L  G P E      + T    +  P+ D
Sbjct: 345 DAFEDEATRLAYYRAEITLSDEERARLPEDVKLVPGMPVEAFIRTSDRTPIYYLTKPLVD 404

Query: 433 NWPKIF 438
            + K F
Sbjct: 405 YFTKAF 410


>gi|326424242|ref|NP_762444.2| RTX toxin transporter [Vibrio vulnificus CMCP6]
 gi|319999627|gb|AAO07434.2| RTX toxin transporter [Vibrio vulnificus CMCP6]
          Length = 467

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/372 (19%), Positives = 160/372 (43%), Gaps = 40/372 (10%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T +++ IG++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQKPPSPFARLTAITLSIGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI----ETTDLIDLKKVSIKNLRCHIDT 112
             I+S     +    V +G ++ +G PLLT + +    + T LI   +     L  +   
Sbjct: 94  QVIQSYEQSRVMSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLITQSEFQTNELIRY--- 150

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  LN++  V +  F +   +    + + + +  + F+  ++S+  S +MK+    
Sbjct: 151 ----RTLLNDQPLVQDPMFTALPTEQQALINENYLSEKREFDATLASI--SAEMKV---- 200

Query: 173 SIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
               NR     + S + AL+   +   + L   K L +   +   +  +QE    K  LE
Sbjct: 201 ----NRTSQAARQSDINALIQLTENISQRLAARKTLNQVKVIGHVEYLEQE----KELLE 252

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTRE 288
           ++  + +Q+  L+ +   Y         +  +  R+  + +R    +++ L   L K RE
Sbjct: 253 VQRQVAQQRAELQVLKSQYQSLEERQTGFKAQKHREWLEKRRQAKLQLAALNQELSKVRE 312

Query: 289 QKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           ++    I SP+ GT+     ++     Q +Q LM IVP + +     ++  K +  V  G
Sbjct: 313 REQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENSVQLAEVQILNKDVGFVYPG 372

Query: 346 YTATVR---FPH 354
            + TV+   FP+
Sbjct: 373 QSVTVKVDAFPY 384


>gi|330806884|ref|YP_004351346.1| HylD like membrane fusion protein component of ABC transporter
           required for LapA secretion [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327374992|gb|AEA66342.1| HylD like membrane fusion protein component of ABC transporter
           required for LapA secretion [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 455

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 94/439 (21%), Positives = 174/439 (39%), Gaps = 60/439 (13%)

Query: 19  RMTLLSIIGIIG----LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           R+  L+I GIIG    L+ W+    I+      G+ +    + +I++   GI+ +  V+ 
Sbjct: 39  RVVRLTIWGIIGFFVFLMLWANFAEIDEVTKGDGKAIPSSKIQKIQNLEGGIVAELFVKE 98

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD--FLNNKYDVL----- 127
           G  +  G  L+  +D      +   +    ++   ++   + +D   LN   DVL     
Sbjct: 99  GQIVDAGASLIRLDDTRFVSNVGETEADRLSMLLRVERLSAEVDDRPLNFPADVLKAVPG 158

Query: 128 -----EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                E  + SR +QL D +G                + R  +++            +  
Sbjct: 159 QAASEESLYLSRRQQLHDEIGGLQEQL----------IQRQQELR------------EFV 196

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI-------VYKSTLELRENIH 235
           +K +  R+ L+  ++++ M + L  + AVS  ++ + +R        +  +TL +     
Sbjct: 197 SKQAQYRSGLALQRQEINMSEPLVAQGAVSPVEVLRLKRAEVETRGQLDATTLAIPRAES 256

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
             K + R I+E   +   E    L E   DL + Q T          LE    +  + SP
Sbjct: 257 AIKEVQRKIDETRGKFRSEALTQLNEARTDLNKAQATG-------KALEDRVSRTLVTSP 309

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +      +     Q    L++IVP      + AK+ P+ I  +  G  ATV+F  Y
Sbjct: 310 VRGIVNKLLVNTIGGVIQPGSDLVEIVPLDDTILVEAKIRPQDIAFLHPGQDATVKFTAY 369

Query: 356 ADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAE 412
                   KA +E+I    I+ +D       YY + L+   + L   +  + +  G  A 
Sbjct: 370 DYTIYGGMKAKLEQIGADTITDEDKK---TTYYVIKLRTERSHLGTDEKPLLIIPGMVAS 426

Query: 413 V-LFTAKNTTLAQEIIHPI 430
           V + T K T L+  ++ PI
Sbjct: 427 VDIITGKKTVLSY-LLKPI 444


>gi|330809469|ref|YP_004353931.1| HlyD family secretion protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377577|gb|AEA68927.1| putative HlyD family secretion protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 456

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 80/426 (18%), Positives = 176/426 (41%), Gaps = 25/426 (5%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           ++ + G + W+ L P++  V  SG ++       ++S   G+++K  V +G ++ QG  L
Sbjct: 43  VLTLGGFLLWACLAPLDQGVVGSGTVVVAGERKAVQSLVGGVVEKLLVSDGDRVTQGQLL 102

Query: 85  LTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           +    ++    +D+   K ++ +++   +  E+     +    ++L  A E R +  +  
Sbjct: 103 VQLNTVQAQSQLDVTLGKLLNDRSIEARLIAERLGNAEIQWPAELLAHADEPRVKAAM-- 160

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                +  S++F    + +   L++      ++    L  E       A +   Q++L  
Sbjct: 161 -----ALQSQLFITRRAELGSRLQIIEHEAAALQQQLLGYEGVKRNYDAQMRFQQQELEG 215

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +++L  +  V +N L + ER   +   ++   + +     + INE    + L+     +E
Sbjct: 216 LRDLAREGYVPRNKLFEAERNAAQLAGQIASGVGDVGRTRQAINE----SRLKALQAQQE 271

Query: 262 ISRDLEQNQRTFADEMS----KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
             RD E      + E +    ++  L+   +   I +P+AG ++     +    AQ  Q 
Sbjct: 272 FRRDAETQLSEVSAEAAGYADQIRALQFEVDNGAIRAPVAGQVMDVSIHTVGGVAQAGQT 331

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM++VP      I A+  P     ++ G    V   H+  ++      +   +  + + Q
Sbjct: 332 LMQVVPLDAPMAITARFEPLMANKLRPGLPVHV---HFTALQRVDTPTVTGTVTTVSADQ 388

Query: 378 DNNLQT-QEYYEVILKI---TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
             N QT Q Y+   ++I   T +A     + +R G  A+V       TL   ++ P+ + 
Sbjct: 389 LINEQTHQPYFSAKVEIPADTVVALQSAGLLVRPGMLADVTVVTGERTLMNYLMKPLRER 448

Query: 434 WPKIFE 439
               F+
Sbjct: 449 LLAAFK 454


>gi|170724220|ref|YP_001751908.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida W619]
 gi|169762223|gb|ACA75539.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida W619]
          Length = 458

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 91/434 (20%), Positives = 169/434 (38%), Gaps = 50/434 (11%)

Query: 19  RMTLLSIIGIIG----LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           R+  L+I GII     +I W+ + PI+      G+ +    V +I++   GI+ +   + 
Sbjct: 42  RIVRLTIWGIIAFFLVMIIWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGIVAQIYAKE 101

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G PLL  +  ET    ++ +     L   +  ++ + +  +    + E+  ++ 
Sbjct: 102 GQIVEVGEPLLRLD--ETRFASNVGETEADRLAMALRVQRLSAEVDDKPLQIDEELRKAA 159

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             Q       Y S   ++ +  IS + + L  K   +R     R    N   LLR     
Sbjct: 160 PSQAASEQSLYQSRRQQLHDE-ISGLEQQLVQKQQELREFTSKRAQYANSLQLLR----- 213

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             +++ M + L  + A+SQ ++           L LR    E +  +         A   
Sbjct: 214 --QEIAMSEPLVAQGAISQVEV-----------LRLRRAEVENRGQMDSTALAIPRAE-- 258

Query: 255 FANYLKEISRDLEQNQRTFADE-----------MSKLTILEKT---REQKTILS-PIAGT 299
               +KE+   +E+ +  F  E           ++K T   K    R  +T++S P+ G 
Sbjct: 259 --AAIKEVQSKIEETRGKFRSEALTQLNEARTELNKATATGKALDDRVNRTMVSSPVRGI 316

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +      +     Q    +++IVP      + AK+ PK I  +  G  ATV+F  Y    
Sbjct: 317 VKQLLVNTVGGVIQPGSDIVEIVPLDDSLVVEAKILPKDIAFLHPGQEATVKFTAYDYTI 376

Query: 360 EKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFT 416
               KA +E+I    I+ +D       YY + L+   + L   +  + +  G  A V   
Sbjct: 377 YGGLKATLEQIGADTITDEDKKTT---YYLIKLRTEKSHLGTDEKPLLIIPGMVATVDIM 433

Query: 417 AKNTTLAQEIIHPI 430
               T+   ++ PI
Sbjct: 434 TGKKTIMSYLLKPI 447


>gi|89070943|ref|ZP_01158172.1| type I secretion membrane fusion protein, HlyD family protein
           [Oceanicola granulosus HTCC2516]
 gi|89043493|gb|EAR49706.1| type I secretion membrane fusion protein, HlyD family protein
           [Oceanicola granulosus HTCC2516]
          Length = 443

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 82/423 (19%), Positives = 178/423 (42%), Gaps = 39/423 (9%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           TWS+   I  +V +SG I  + N   I+ P  G++ +  V+ G ++  G  L+  +  E 
Sbjct: 40  TWSVSARITGAVIASGRIEVDQNRQVIQHPDGGVVAEILVKEGDEVAAGEMLIRLDPDEL 99

Query: 93  TD---LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL------EKAFESREEQLLDFLG 143
                +I+ +   +   R  ++ E+   D +   +D +      EK  E  E Q   F  
Sbjct: 100 LSELAVIEGQLFELMARRGRLEAERDGADEI--VFDPVLREQPPEKVAELMEGQQRLFQA 157

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDLTMM 202
           +  S  S+             K +L + R    +++  +E + + L   L   +++L   
Sbjct: 158 RRESISSE-------------KEQLAKRRDQIADQIIGIEAQEAALDRQLELLEEELADQ 204

Query: 203 KNLFEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANY 258
           ++L ++     +    L +++  +  +  EL  ++ + +  +  I  +L     ++ A  
Sbjct: 205 QSLLDRGLAQASRVIALQREQANLSGTRGELVASVAQAEGRITEIEIQLI---GIDRARR 261

Query: 259 LKEIS--RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS-FSSSNYAQQS 315
            + IS  RDL+ N+   A+    L    +  ++  I +P++G IVY  + F+  +  + +
Sbjct: 262 EEAISTLRDLQYNESELAERRRALL---RQLDRLDIRAPVSG-IVYGMTVFAPRSVIRPA 317

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            P++ +VP  +   I  ++TP  +  V+ G    +RF  +   R  +    +  +     
Sbjct: 318 DPVLYLVPQDRPLVITTQITPTDVDQVRVGQEVALRFSAFDQRRTPELYGEVVTLSADAF 377

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
           Q + N  +    E++L   +       + +  G P E     +  T  + ++ P++D + 
Sbjct: 378 QDEQNRASYYRAEIVLNEGEAERLPEGMTMIPGMPVETFIRTEERTPMEYLLKPLSDYFA 437

Query: 436 KIF 438
           K F
Sbjct: 438 KAF 440


>gi|28901298|ref|NP_800953.1| putative protein secretion protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153836033|ref|ZP_01988700.1| membrane-fusion protein [Vibrio parahaemolyticus AQ3810]
 gi|260362855|ref|ZP_05775724.1| membrane-fusion protein [Vibrio parahaemolyticus K5030]
 gi|260880143|ref|ZP_05892498.1| membrane-fusion protein [Vibrio parahaemolyticus AN-5034]
 gi|260895260|ref|ZP_05903756.1| membrane-fusion protein [Vibrio parahaemolyticus Peru-466]
 gi|260900612|ref|ZP_05909007.1| membrane-fusion protein [Vibrio parahaemolyticus AQ4037]
 gi|28809811|dbj|BAC62786.1| putative protein secretion protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149750787|gb|EDM61532.1| membrane-fusion protein [Vibrio parahaemolyticus AQ3810]
 gi|308085760|gb|EFO35455.1| membrane-fusion protein [Vibrio parahaemolyticus Peru-466]
 gi|308091871|gb|EFO41566.1| membrane-fusion protein [Vibrio parahaemolyticus AN-5034]
 gi|308106979|gb|EFO44519.1| membrane-fusion protein [Vibrio parahaemolyticus AQ4037]
 gi|308111997|gb|EFO49537.1| membrane-fusion protein [Vibrio parahaemolyticus K5030]
          Length = 446

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 99/451 (21%), Positives = 185/451 (41%), Gaps = 51/451 (11%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           NL    P  L   TL   +G  GL  W+    +E +  + G++       EI+    GII
Sbjct: 24  NLSFKKPILLGVATLSFFLG--GLGYWAATAKLESAAIAYGDLSVLTKRQEIQHLEGGII 81

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS-------IKNLRCHIDTEKSALDFL 120
           +K  V+ G  + +G PL+     +   +  L  VS        K  R   + ++ A    
Sbjct: 82  EKLYVQEGDLVKKGQPLVQLS--QRQPMAKLDAVSGQYIHTLAKENRLSAELDELADISW 139

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK------LTRMRSI 174
           +   + + +    +E QL+    K  +   + F   +S + +S+         L + + I
Sbjct: 140 SGDLEAIPRVNIVKEAQLVQ--NKIFTARKRFFESKLSIIEQSISGASLELENLKQTKVI 197

Query: 175 YLNRLD-LENKSSLLRALLS---SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
              RL+ +E + +  +AL+    S +  L  +K L  +   + + L++Q   V K   E 
Sbjct: 198 ERERLNFIEEEIASNQALVQKGFSGKSTLLQLKRLAAEVRSTLSQLDRQSLTVGKRLDEN 257

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +  I E K  L  +NE+ +E      N  KE+   + +  R+  D +++           
Sbjct: 258 QAKIEELK--LERLNEIVEE----LRNTKKEVVA-IREEYRSAQDVVAR----------T 300

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +I +PI+G +V  Q F+        Q L+++VP      + A+V P+ I  +  G  A V
Sbjct: 301 SINAPISGRVVNMQVFTEKGVIGSGQTLLELVPQDDKLLVEARVNPQDIDLINPGQQAHV 360

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRN 407
           R               +  +      Q+N     +YY     +  ++ S +++    L +
Sbjct: 361 RLTALNARTLAPLDGTVLTVSADKLSQENQ---DDYY-----LARISISQDDVAKYRLTS 412

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G  AEVL  ++  T    +I P+T++  + F
Sbjct: 413 GMNAEVLILSEPRTPLSYLIKPLTESMNRAF 443


>gi|308205588|gb|ADO19061.1| secretion protein [Nostoc flagelliforme str. Sunitezuoqi]
          Length = 226

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 5/94 (5%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M  L  +   G I W+ L  IE  V ++G++  E  V ++++P SG++K   V++G  + 
Sbjct: 65  MITLMALACFG-IAWAYLAKIEQVVPATGQLKPEGTVKDVQAPVSGVVKTVNVKDGQAVK 123

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            G  LLTF+ I +   +D    S+K +R  ++ E
Sbjct: 124 PGDLLLTFDSIASVAELD----SLKKIRVALNRE 153


>gi|119946468|ref|YP_944148.1| type I secretion membrane fusion protein, HlyD family protein
           [Psychromonas ingrahamii 37]
 gi|119865072|gb|ABM04549.1| type I secretion membrane fusion protein, HlyD family protein
           [Psychromonas ingrahamii 37]
          Length = 404

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 135/337 (40%), Gaps = 64/337 (18%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           ++G+IG   WS    I+    ++GE++    V  I++   G++    V+ G ++ +G  L
Sbjct: 37  LLGMIGFGFWSASFRIDQVARATGEVIASSRVQIIQAVDGGVLSTLNVKEGDRVAKGEVL 96

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            T           L +  I      +D   SAL           KA   R E        
Sbjct: 97  AT-----------LDQTRIGAAVKEVDVRLSALK---------AKATRLRAE-------- 128

Query: 145 YHSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTM 201
              T SK  +F  G+      +K++    R+++  +   L  +   L+  +S   ++  +
Sbjct: 129 --VTGSKRLIFPEGVQRFPDLMKVE----RALFEQKQTGLSEELRTLKVAVSLAGEEAEL 182

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +K L         D+N+ E  V +S   L +    Q  ++   N+  +E + E A    E
Sbjct: 183 IKEL-----SGSGDVNRTE--VIRSARALNDA---QAQLINRKNKYLEEVSSELAKAEDE 232

Query: 262 ISRD---LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           I+++   L Q Q+  AD +               ++ + G +   +  +     +    L
Sbjct: 233 IAQNVQILTQRQQQLADSV--------------FIASLPGIVKNVRVTTLGGVLRGGDEL 278

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           M+I+P      I AKV+P  I  V+KG  AT+RF  +
Sbjct: 279 MQIIPVDDELIIEAKVSPADIGQVQKGLQATIRFDPF 315


>gi|253998720|ref|YP_003050783.1| HlyD family type I secretion membrane fusion protein [Methylovorus
           sp. SIP3-4]
 gi|313200799|ref|YP_004039457.1| HlyD family type I secretion membrane fusion protein [Methylovorus
           sp. MP688]
 gi|253985399|gb|ACT50256.1| type I secretion membrane fusion protein, HlyD family [Methylovorus
           sp. SIP3-4]
 gi|312440115|gb|ADQ84221.1| type I secretion membrane fusion protein, HlyD family [Methylovorus
           sp. MP688]
          Length = 470

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 137/344 (39%), Gaps = 42/344 (12%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           I+ L+ W+ L  ++      G ++    V  I+S   GI+    V  G  +  GTPL+  
Sbjct: 71  IVLLLIWAALTKVDEVTRGEGRVIPSKQVQVIQSLDGGIVTSLLVHEGQSVNVGTPLVRI 130

Query: 88  EDIETTDLIDLKK-------VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           +  ET  +  L++       +  K  R     + +A  F+     + E      +EQ L 
Sbjct: 131 D--ETRAISSLRENRSQYLSLVAKQARLRALADDTA--FMPPPEVMKENPSVYSQEQALY 186

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           F  K            ++S     + +LT R R +   +  LE     L   LSS  ++L
Sbjct: 187 FASKDE----------LASQVAIAREQLTQRQRELSEIQAKLEQAERGLE--LSS--REL 232

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + K L    AVS+ DL + ER     T  LR +  + +  +  +     EA+      +
Sbjct: 233 AVTKPLLGTGAVSEVDLLRLER----DTARLRGDRDQARAQIGRVEAAISEAS----RKV 284

Query: 260 KEISRDLEQNQRT-FADEMSKLTILEKTR-------EQKTILSPIAGTIVYNQSFSSSNY 311
            E  +      RT  +D  +KL  L +T         Q T+ SP+ GT+      +    
Sbjct: 285 SEAQQSFRSKVRTELSDTTAKLNSLVETSVALNDKVVQSTLKSPVKGTVSRLFINTVGGV 344

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            Q  + +M+IVP      +  K+ P+ I  +  G  ATV+   Y
Sbjct: 345 IQPGKEVMEIVPTDDALILETKIQPRDIAFISFGQPATVKLTAY 388


>gi|328469236|gb|EGF40182.1| putative protein secretion protein [Vibrio parahaemolyticus 10329]
          Length = 446

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 99/451 (21%), Positives = 185/451 (41%), Gaps = 51/451 (11%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           NL    P  L   TL   +G  GL  W+    +E +  + G++       EI+    GII
Sbjct: 24  NLSFKKPILLGVATLSFFLG--GLGYWAATAKLESAAIAYGDLSVLTKRQEIQHLEGGII 81

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS-------IKNLRCHIDTEKSALDFL 120
           +K  V+ G  + +G PL+     +   +  L  VS        K  R   + ++ A    
Sbjct: 82  EKLYVQEGDLVKKGQPLVQLS--QRQPMAKLDAVSGQYIHTLAKENRLSAELDELADISW 139

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK------LTRMRSI 174
           +   + + +    +E QL+    K  +   + F   +S + +S+         L + + I
Sbjct: 140 SGDLEAIPRVNIVKEAQLVQ--NKIFTARKRFFESKLSIIEQSISGASLELENLKQTKVI 197

Query: 175 YLNRLD-LENKSSLLRALLS---SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
              RL+ +E + +  +AL+    S +  L  +K L  +   + + L++Q   V K   E 
Sbjct: 198 ERERLNFIEEEIASNQALVQRGFSGKSTLLQLKRLAAEVRSTLSQLDRQSLTVGKRLDEN 257

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +  I E K  L  +NE+ +E      N  KE+   + +  R+  D +++           
Sbjct: 258 QAKIEELK--LERLNEIVEE----LRNTKKEVVA-IREEYRSAQDVVAR----------T 300

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +I +PI+G +V  Q F+        Q L+++VP      + A+V P+ I  +  G  A V
Sbjct: 301 SINAPISGRVVNMQVFTEKGVIGSGQTLLELVPQDDKLLVEARVNPQDIDLINPGQQAHV 360

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRN 407
           R               +  +      Q+N     +YY     +  ++ S +++    L +
Sbjct: 361 RLTALNARTLAPLDGTVLTVSADKLSQENQ---DDYY-----LARISISQDDVAKYRLTS 412

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G  AEVL  ++  T    +I P+T++  + F
Sbjct: 413 GMNAEVLILSEPRTPLSYLIKPLTESMNRAF 443


>gi|319785094|ref|YP_004144570.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170982|gb|ADV14520.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 445

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 87/450 (19%), Positives = 181/450 (40%), Gaps = 58/450 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           PA +  + +++  GI G   W+   P+  +V +   +  + N   ++    G +K+ +V+
Sbjct: 26  PAYIGLLIIVAFFGIFG--GWAAFAPLNGAVLADAIVKVDGNRKSVQHFDGGTVKEIRVK 83

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLK-------KVSIKNLRCHID-TEKSAL--DFLNNK 123
           +G  + +G  +L  +D       +L        + +   +R  +D +E  A   D L   
Sbjct: 84  DGDVVRKGDIMLKLDDTRIRSEFNLYAQQYALLRATDARIRAELDGSEVVAFPKDILKEH 143

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCS--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            D L  A  +   Q+ D   +  S     ++    I+ +   ++ K +R+ S +      
Sbjct: 144 EDYLRDAMAN---QIADLESQRASMAGARQILERRIAELEEQIQGKQSRVESYHAQLQST 200

Query: 182 ENK----SSLLRALLSSHQKDLTM------MKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            N+    S LL+A L++  + L +      ++ L ++N  +     Q       S  EL 
Sbjct: 201 INEKASLSKLLKAGLTTRPRILELERSASDLQGLIDENLGAIGGSQQ-------SKAELE 253

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             I +  N  R                  ++S  L   Q + +D + K+   +   ++  
Sbjct: 254 SQIAQLTNERR-----------------AKLSAMLIDTQSSLSDLVPKMFAAQAAMDRAE 296

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P  G ++    FS        Q ++ IVP      ++A++  + I +++    A VR
Sbjct: 297 VRAPYDGQVIDLSVFSIGAIVSPGQTILDIVPTENSLIVQAQIRVEDISNLRPDMAAEVR 356

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYY--EVILKITDLAFSDNNIELRNG 408
           F  Y   +++    I  ++  I + +  + +T   YY  +V +   +LA +   I L  G
Sbjct: 357 FTSY---KQRSIPIIHGRVSRISADRITDSKTGFPYYLADVAVDPVELAAA-PQIALYPG 412

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            PA V+   +  T    I+ P+  ++   F
Sbjct: 413 MPASVMIVTEERTALDYILGPLVVSFHSAF 442


>gi|119387040|ref|YP_918095.1| HlyD family type I secretion membrane fusion protein [Paracoccus
           denitrificans PD1222]
 gi|119377635|gb|ABL72399.1| type I secretion membrane fusion protein, HlyD family [Paracoccus
           denitrificans PD1222]
          Length = 443

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 111/278 (39%), Gaps = 46/278 (16%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQ 237
           +E + +LLR       +D      L ++  V ++D+N   R +  +  E   +R  I E 
Sbjct: 189 VETQLALLR-------EDHGARDTLLQRGLVRRSDVNMLARAIADAEGEAGRIRSLIAET 241

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTREQKT----- 291
           +  +R                  EI + L Q+++T  DE   +   L+  REQ       
Sbjct: 242 EEAVRKAE--------------SEIEQVLTQHRQTALDEGQGIEAELDSVREQSLKAQDV 287

Query: 292 -----ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                I SP+AGTIV     +     +  +P+++I+P      I   V    I  ++ G 
Sbjct: 288 LERAYITSPVAGTIVRMHYHTPGGVIEAGKPILEILPLDAPLIIETHVARTDIDEIEIGQ 347

Query: 347 TATVRFPHYADIREKKFKA--IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD---- 400
            A+VR            +   +    D + ++ D     +E Y  +++I DL  ++    
Sbjct: 348 KASVRLTSLNQRTTPVLQGHLVYVSADALTTETDGI--AREVY--VVRI-DLPAAELERV 402

Query: 401 NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           +      G PAEV+      T AQ +I PI D+  + F
Sbjct: 403 HGFRPTPGMPAEVMIETSARTFAQYLIKPIEDSLSRAF 440


>gi|86358827|ref|YP_470719.1| HlyD family protein secretion protein [Rhizobium etli CFN 42]
 gi|86282929|gb|ABC91992.1| protein secretion protein, HlyD family [Rhizobium etli CFN 42]
          Length = 435

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 5/180 (2%)

Query: 261 EISRDLEQNQRTFAD-EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           EI++DL   +   A+ E  + T L++ R +  I +P++G +      + +   +  Q L 
Sbjct: 256 EIAKDLTDVEAQIAENEERRGTALDQLR-RLDITAPLSGRVHELSVHTVNGVIEAGQTLG 314

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +VP +    ++AKV  + I  V  G +  VRF  +        +A+I  I P I + + 
Sbjct: 315 LVVPENDDLTVQAKVATRDIDQVHVGQSVDVRFSAFDQRTTPDVQAVITSIAPDIVKDER 374

Query: 380 NLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                 YY + +K    + +   +I+L  G PAEV     + T+   +  P+TD    +F
Sbjct: 375 T--GISYYPLRVKPEAQSIAKLKSIKLYPGMPAEVFIKIGDRTVISYLTKPLTDQMQHVF 432


>gi|153011293|ref|YP_001372507.1| HlyD family type I secretion membrane fusion protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151563181|gb|ABS16678.1| type I secretion membrane fusion protein, HlyD family [Ochrobactrum
           anthropi ATCC 49188]
          Length = 479

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 87/437 (19%), Positives = 173/437 (39%), Gaps = 44/437 (10%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL +I + G   W++  P++ +  + G +  E +   I+    GI+++  V NG  +  G
Sbjct: 64  LLVLIFVAGFGIWAVFAPLKSAAVAVGVVEAESSRKTIQHLEGGIVQQIYVHNGDLVSNG 123

Query: 82  TPLLTFEDIET-TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
             L+  +D +  T+L+ ++           D + S    +  + + ++  F    EQL  
Sbjct: 124 QILIKLDDTKPRTELVGIQG-------QLWDAQASRARLVAEQANEMQLLFPPELEQLAP 176

Query: 141 FLGKYHSTC---SKVFNYGISSVYRS-LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                ++      ++F      VYRS + +   +M  +      L  +   L + +   +
Sbjct: 177 HNPAVNAIVVGQRRIFE-ARRDVYRSEIAITHEKMGQVKEEITGLAAQKMALSSRIEITR 235

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--- 253
           + L M+  L +K    +  +    R       +L E I +     + INE   +ANL   
Sbjct: 236 QQLDMINPLVKKGLERKTSVLNLAREKADLDGQLGETIAQMSRAYQVINEA--QANLVKL 293

Query: 254 ------EFANYLKEISRD---LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                 E A  L+E       L +  R   D++ +            I +P  G ++  +
Sbjct: 294 ESDRQNEIAKELRETENQLFLLSERYRAINDQLIR----------TDIKAPENGIVMDLR 343

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             ++       +PL+ +VP      + A V P+ I  V+ G  A V    Y   R    +
Sbjct: 344 IHTTGGVIGAGEPLLDLVPQDGNMIVSAHVRPEDINLVRPGLNAQVHLLPYDQRRVPLLE 403

Query: 365 AIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTT 421
             +  +  D +I +Q      Q YY   +++TD       ++E+  G P + L     ++
Sbjct: 404 GQVTYVSADRLIDKQTG----QPYYAATIRVTDDELMQAGDVEMIPGMPVQALIETGESS 459

Query: 422 LAQEIIHPITDNWPKIF 438
           +A   + P+ D++ + F
Sbjct: 460 VALYAVRPLLDSFHRAF 476


>gi|261213109|ref|ZP_05927393.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio sp. RC341]
 gi|260838174|gb|EEX64851.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio sp. RC341]
          Length = 463

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 88/436 (20%), Positives = 177/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  +TW+    I+      G+++    V  I++   G++K+  
Sbjct: 27  NTPHSARIILWVMVAFFILAVTWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     +++++F
Sbjct: 87  VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDESF 141

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R+ Y   LD L N+ S+L 
Sbjct: 142 EEK-----NWSNSVRLDYSKLAFPPVLSDSQPEL---VERQRNQYRQDLDNLRNQLSVLS 193

Query: 190 ALLSSHQKDLTMMKNL---------FEKNAVSQNDLNQQERIVYK-STLELRENIHEQKN 239
             +   Q+DL   ++          F K  +   +    E +V K   L+L+  +++ + 
Sbjct: 194 QQIKQKQQDLVEAESRVVSLRQGYDFAKKELEITEPLANEGVVPKIELLKLQRQVNDTRR 253

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +N    EA L   N  ++   + +       D++S LT     LE    
Sbjct: 254 ELTSTELKIPVLNAAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSALTESAVGLEDKVN 313

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 314 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIVEIVPTEDTLLVEAQIAPQDIAFLRPELPA 373

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 374 IVKFTAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTIGHDKNLPIIP 430

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 431 GMTASVDIITGKRTVL 446


>gi|241205917|ref|YP_002977013.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240859807|gb|ACS57474.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 435

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 89/445 (20%), Positives = 174/445 (39%), Gaps = 57/445 (12%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +LSI  + G+  W+    +  +V   G I+ + +V +++    GI+ +  V     + 
Sbjct: 19  VGVLSIALVCGIGGWAATTELSSAVIGEGVIVVDGDVKKVQHLTGGIVSELLVSENDHVT 78

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            G  L+  +   T   + + + ++  L   R  +  E+   D           +FE  EE
Sbjct: 79  AGQVLIRLDGTTTRANLSIVESTLAQLYARRARLKAERIGAD-----------SFEV-EE 126

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSS 194
            + D      ST +     G   ++ S +  L  M+S   +R D   E    L+  + ++
Sbjct: 127 NISDL---TSSTSAAKLLDGEQKLFDSRRTALIGMKSQLASRKDQLGEQVKGLVVQINAT 183

Query: 195 H------QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML------- 241
           +      +++L  +  L++K  V+   LN  +R    +  +L+ N  ++           
Sbjct: 184 NDALGLIEQELEGIDTLYKKGLVTLQRLNTLKR----ARADLQGNSGQEIAAKAEAEGKA 239

Query: 242 ----RHINELYDEANLEFANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILS 294
               R   +L ++   E A  L ++   +   E+ + T  D++ +L I           +
Sbjct: 240 IEIDRQSIQLDEDRRSEIAKDLTDVEAQIAEYEERRGTALDQLHRLDIT----------A 289

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P+ G +      + +      Q LM +VP +    + AKV  + I  V  G +  VRF  
Sbjct: 290 PLTGRVHELSVHTVNGVIDPGQTLMLVVPENNELMVEAKVATRDIDQVHVGQSVDVRFSA 349

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEV 413
           +           I  I P I + +       YY + +K    + +    I+L  G PAEV
Sbjct: 350 FDQRTTPDVSGEITSIAPDIVKDERT--GISYYPLRVKPKAESIARMKTIKLYPGMPAEV 407

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIF 438
                + T+   +  P+TD    +F
Sbjct: 408 FIKIGDRTVISYLTKPLTDQMQHVF 432


>gi|255745825|ref|ZP_05419773.1| RTX toxin transporter [Vibrio cholera CIRS 101]
 gi|262147162|ref|ZP_06027970.1| membrane-fusion protein [Vibrio cholerae INDRE 91/1]
 gi|262169259|ref|ZP_06036951.1| RTX toxin transporter [Vibrio cholerae RC27]
 gi|262191142|ref|ZP_06049345.1| membrane-fusion protein [Vibrio cholerae CT 5369-93]
 gi|255736900|gb|EET92297.1| RTX toxin transporter [Vibrio cholera CIRS 101]
 gi|262022072|gb|EEY40781.1| RTX toxin transporter [Vibrio cholerae RC27]
 gi|262031397|gb|EEY50003.1| membrane-fusion protein [Vibrio cholerae INDRE 91/1]
 gi|262032977|gb|EEY51512.1| membrane-fusion protein [Vibrio cholerae CT 5369-93]
 gi|327484105|gb|AEA78512.1| RTX toxin transporter [Vibrio cholerae LMA3894-4]
          Length = 453

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/377 (19%), Positives = 161/377 (42%), Gaps = 50/377 (13%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 20  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 79

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +            I  L    + + + 
Sbjct: 80  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQ-------DITRLVSQAEFQTNE 132

Query: 117 L----DFLNNK---YDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           L      LN++   +D +  A  + ++ L+  ++L + +      F+  ++S+   +K+ 
Sbjct: 133 LIRYRTLLNDQLLTHDPMFTALPAEQQALIHENYLSEKNE-----FDSTLASITAEMKV- 186

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                    NR     + S + ALL   +   + L   K L +   +   +  +QE    
Sbjct: 187 ---------NRTSQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQE---- 233

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-L 283
           K  LE +  + +Q+  L  +   Y+        +  +  R+  + +R    +++ L   L
Sbjct: 234 KELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQEL 293

Query: 284 EKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            K RE++    I SP+ GT+     ++     Q +Q LM IVP +++     ++  K + 
Sbjct: 294 SKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVG 353

Query: 341 HVKKGYTATVR---FPH 354
            V  G + TV+   FP+
Sbjct: 354 FVYPGQSVTVKVDAFPY 370


>gi|268679429|ref|YP_003303860.1| type I secretion membrane fusion protein, HlyD family
           [Sulfurospirillum deleyianum DSM 6946]
 gi|268617460|gb|ACZ11825.1| type I secretion membrane fusion protein, HlyD family
           [Sulfurospirillum deleyianum DSM 6946]
          Length = 440

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 178/432 (41%), Gaps = 56/432 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S ++M  + +I I  L+ W+ +  I+      G+++    +  I++   GI+ +  V+
Sbjct: 24  PNSSRKMIWIMVISIGWLLLWASIAEIDELTRGEGKVIPSQQLQVIQNLEGGIVSEILVK 83

Query: 74  NGSQILQGTPLLTFEDIETTD--------LIDLKKVSIKNLRCHIDTEKSA---LDFLNN 122
            G ++ +G  LL  +D              I+LK  S++               LD    
Sbjct: 84  EGDRVKKGQILLKIDDKNFASSYGENRLRYIELKAKSMRLEAEANAEAFEVSQDLDEQMQ 143

Query: 123 KYDVLEKA-FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           +  V EK+ + S +EQL           +K F      +   +K K + +        +L
Sbjct: 144 QQIVYEKSLYNSNQEQL-----------TKTFQI----LNEQIKQKESELT-------EL 181

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQK 238
           E+K + L       +K++ +M  L +K  VS+ +  Q +R       EL   R  I   K
Sbjct: 182 ESKVAQLSTSYDLVKKEIDIMAPLVKKGLVSEMEFLQLKRQTNNVQGELQTSRLAIPRVK 241

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL----TILEKTREQKTILS 294
           + +  +     EA L F N  K+     E N+     EMS+L    T LE   ++  + +
Sbjct: 242 SAIAEVQNKRLEAELNFQNRAKK-----ELNE--IIAEMSRLNEAQTSLEDRVKRTLVRA 294

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P+ GT+      + S   +    +++IVP      + AKV P  +  ++ G  A V+F  
Sbjct: 295 PVDGTVKQLLVNTVSGVVKPGMDILEIVPSEDTLLVEAKVKPSDVGFLRLGLDAMVKFTA 354

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPA 411
           Y D     +  +  K+  I +    N + + YY V +K TD   L   +  +EL  G   
Sbjct: 355 Y-DF--SIYGGLAGKVVFISADTITNERGETYYIVHIK-TDKNHLGTVEKPLELMVGMTT 410

Query: 412 EV-LFTAKNTTL 422
            V + T K T L
Sbjct: 411 SVDILTGKKTVL 422


>gi|146294676|ref|YP_001185100.1| HlyD family type I secretion membrane fusion protein [Shewanella
           putrefaciens CN-32]
 gi|145566366|gb|ABP77301.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           putrefaciens CN-32]
 gi|319427912|gb|ADV55986.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           putrefaciens 200]
          Length = 460

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 81/386 (20%), Positives = 155/386 (40%), Gaps = 58/386 (15%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           I+  + W+    ++   + SG+++    V  I+S   GI+++  V  G  + +G PL+  
Sbjct: 39  IVCFLLWAAFAKLDKVTTGSGKVIPSSQVQVIQSLDGGIMQELYVREGELVTKGQPLVRI 98

Query: 88  EDI--------ETTDLIDLKKVSIKNLRCHIDT----------------EKSALDFLNNK 123
           +D         +  ++  LK  +I+ +R  +D+                 K AL F ++ 
Sbjct: 99  DDTRFRSDFAQQEQEVFGLKTNAIR-MRAELDSILISDMTSDWREQVLITKKALVFPDSI 157

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               E A   R+++               +N  + ++   L++ + +++       +L +
Sbjct: 158 V-AAEPALVHRQQE--------------EYNGRLDNLSNQLEILVRQIQQRQQEIDELAS 202

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR- 242
           K++ L   +    ++L + + L +K  V + +L + ER V  +  EL        N LR 
Sbjct: 203 KTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLERAVNDAQGEL--------NSLRL 254

Query: 243 ---HINELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-S 294
               +    DEA L+       Y  ++   L + Q T    M++  +  + +  K I+ S
Sbjct: 255 LRPKLKSALDEAILKRREAVFVYAADLRAQLNETQ-TRLSRMNEAQVGAQDKVSKAIITS 313

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P+ GTI      +     Q    +++IVP      I  KV PK I  +  G  A V+   
Sbjct: 314 PVNGTIKTTHINTLGGVVQPGVNIIEIVPSEDQLLIETKVLPKDIAFLHPGLPAIVKVTA 373

Query: 355 YADIREKKFKAIIEKIDPIISQQDNN 380
           Y   R    K  +E I    SQ +  
Sbjct: 374 YDFTRYGGLKGTVEHISADTSQDEEG 399


>gi|172037972|ref|YP_001804473.1| HlyD family secretion protein [Cyanothece sp. ATCC 51142]
 gi|171699426|gb|ACB52407.1| HlyD-family secretion protein [Cyanothece sp. ATCC 51142]
          Length = 572

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 92/444 (20%), Positives = 180/444 (40%), Gaps = 108/444 (24%)

Query: 19  RMTLLSIIGI--IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           R  + +I+G+  IGL+ W+ +  IE  + + G++  + +V EI+SP +G++++  VE+G 
Sbjct: 55  RAVVGAILGVTTIGLV-WANVAKIEQVIPAQGQLKPQGSVKEIQSPVNGVVQEVYVEDGE 113

Query: 77  QILQGTPLLTFEDIETT-DLIDLKKV----------------------SIKNLRCHIDTE 113
           ++ +   LL  +   +T  L   KK+                       ++     +   
Sbjct: 114 RVKKNQLLLKLDSTASTAQLASFKKIRQTLQQENKFYQTLMEQSLDAAKVEQAIARLKLP 173

Query: 114 KSALDFLNNKYDVL--EKAFES---REEQLLDF----LGKYHSTCSKVFNYGISSVYRSL 164
           K   D   N+  ++   + FE       Q L      L +  +T ++V +   ++     
Sbjct: 174 KEVADLARNRTSLVGETRLFEGLVNEGTQALSLSPEQLARLQATRTEVVSRATTAQLEVQ 233

Query: 165 KMK----------------LTRMRSIYLNRLDLENK--SSLLRALLSSHQKDLTMMKNLF 206
           K++                L + + + L  +++ N+   +  R  L   Q+ L  +  L 
Sbjct: 234 KLQKQLNQNQVQLADARVQLAKDKQV-LEDINVRNQLAQAQARESLRIEQEILADVSPLL 292

Query: 207 EKNAVSQNDLNQQERIV---YKSTLELREN----------------------IHEQKNML 241
           E+ A+++  + +Q++ V   Y + +E R N                      + EQ+ + 
Sbjct: 293 EEGAIAKLQIKEQQQQVNDRYAALVEQRGNGAIEYEQQQQQVQNRLAAIEQLLEEQQRLQ 352

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT---------- 291
             IN+   +     A   +EI   +  NQ+  AD  S+LT +    E++           
Sbjct: 353 LAINQAQAQLTNTTALAEREIRDKIADNQQKIADIDSQLTKIVVDNEKRIAELDSQISST 412

Query: 292 --------ILSPIAGTIVYNQSFSSSNYA---QQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                   + SP+AGT+   Q  +S  +     Q++PL+KIVP   L      VT + I 
Sbjct: 413 QVTLKYQELRSPVAGTVFDLQ--ASPGFVPPPSQTEPLLKIVPDDHLVA-EVNVTNQDIG 469

Query: 341 HVKKGYTATVR-----FPHYADIR 359
            V++G  + VR     F  + DI+
Sbjct: 470 FVRQGMKSDVRIDSFPFSEFGDIK 493


>gi|120600518|ref|YP_965092.1| HlyD family type I secretion membrane fusion protein [Shewanella
           sp. W3-18-1]
 gi|120560611|gb|ABM26538.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           sp. W3-18-1]
          Length = 460

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 81/386 (20%), Positives = 155/386 (40%), Gaps = 58/386 (15%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           I+  + W+    ++   + SG+++    V  I+S   GI+++  V  G  + +G PL+  
Sbjct: 39  IVCFLLWAAFAKLDKVTTGSGKVIPSSQVQVIQSLDGGIMQELYVREGELVTKGQPLVRI 98

Query: 88  EDI--------ETTDLIDLKKVSIKNLRCHIDT----------------EKSALDFLNNK 123
           +D         +  ++  LK  +I+ +R  +D+                 K AL F ++ 
Sbjct: 99  DDTRFRSDFAQQEQEVFGLKTNTIR-MRAELDSILISDMTSDWREQVLITKKALVFPDSI 157

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               E A   R+++               +N  + ++   L++ + +++       +L +
Sbjct: 158 V-AAEPALVHRQQE--------------EYNGRLDNLSNQLEILVRQIQQRQQEIDELAS 202

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR- 242
           K++ L   +    ++L + + L +K  V + +L + ER V  +  EL        N LR 
Sbjct: 203 KTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLERAVNDAQGEL--------NSLRL 254

Query: 243 ---HINELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-S 294
               +    DEA L+       Y  ++   L + Q T    M++  +  + +  K I+ S
Sbjct: 255 LRPKLKSALDEAILKRREAVFVYAADLRAQLNETQ-TRLSRMNEAQVGAQDKVSKAIITS 313

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P+ GTI      +     Q    +++IVP      I  KV PK I  +  G  A V+   
Sbjct: 314 PVNGTIKTTHINTLGGVVQPGVNIIEIVPSEDQLLIETKVLPKDIAFLHPGLPAIVKVTA 373

Query: 355 YADIREKKFKAIIEKIDPIISQQDNN 380
           Y   R    K  +E I    SQ +  
Sbjct: 374 YDFTRYGGLKGTVEHISADTSQDEEG 399


>gi|84687478|ref|ZP_01015355.1| HlyD family secretion protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84664503|gb|EAQ10990.1| HlyD family secretion protein [Rhodobacterales bacterium HTCC2654]
          Length = 435

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 86/423 (20%), Positives = 172/423 (40%), Gaps = 54/423 (12%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +T+L + GI G I W+ +  IE      G ++    V  I+S   GI+++  ++ G+ + 
Sbjct: 29  LTVL-VAGIAGFIWWAAVFEIEEVTRGVGRVVPSQQVQVIQSLEGGIVREILIDEGATVD 87

Query: 80  QGTPLLTFEDI----ETTDLIDLKKVSIKNL-RCHIDTEKS-ALDF-------LNNKYDV 126
           +  PLL  +D     +  +L++ +   +  L R   + E   AL F              
Sbjct: 88  RNAPLLRIDDTAAGAQRGELLEQEATLMAELIRVRTEAEGGEALAFPEALAARAPEAVAA 147

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            ++ F SR  QL                   SS  + L+ +LT+ R+      ++E   +
Sbjct: 148 EQEVFASRRSQL-------------------SSELQVLEDQLTQRRA------EIEEARA 182

Query: 187 LLRAL---LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           ++  L   ++   +++ + +   E  AV+Q +L + E  + +   +L  +      +   
Sbjct: 183 MIAKLEGQIAPLAEEVRLTRQYVETGAVTQIELLRLETRLAELEGDLAVSRARMPRLDAA 242

Query: 244 INELYDEANLEFAN--YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           I E   EA LE A   Y+      L + Q   +     L   E    + T+ +P+ G + 
Sbjct: 243 IAEA--EAQLETARRAYVLTARERLARVQGELSVLRETLRAAEDRVTRTTLRAPVRGVVN 300

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +         PL++IVP      I A+++P+ +  ++ G  A+V+   +  +   
Sbjct: 301 TLNVTTIGAVVGPGDPLVEIVPVDDHLLIEARISPQDVAFLRPGDPASVKITAFDYVVYG 360

Query: 362 KFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKN 419
                +E+I    ++ +D N     +++V ++        N I    G  A+V + T + 
Sbjct: 361 SLSGTVERIGADTLTDEDGN----AFFQVAVRTDSTDLGGNQIS--PGMVAQVDIQTGRK 414

Query: 420 TTL 422
           T L
Sbjct: 415 TVL 417


>gi|237731512|ref|ZP_04561993.1| type I secretion membrane fusion protein [Citrobacter sp. 30_2]
 gi|226907051|gb|EEH92969.1| type I secretion membrane fusion protein [Citrobacter sp. 30_2]
          Length = 443

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 92/458 (20%), Positives = 177/458 (38%), Gaps = 62/458 (13%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H+     +  N  + + R  ++ ++G+   I W++  P++  V + G +    N   I+ 
Sbjct: 8   HNTASAGVDTNIWSPIIRGVIVIVLGVGSFIFWAVQAPLDAGVVADGTVTVSSNRKTIQH 67

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G +    ++ G                  D +   +V ++  +  ++   SAL   N
Sbjct: 68  LSGGRVTDIFIKEG------------------DFVKKNQVLVRLDKMQLEMRFSAL---N 106

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +Y +  K+ E R       L +     + VFN  ++  +   K +LT +R++     D 
Sbjct: 107 AQY-ISAKSIEDR------LLAERDGLEAIVFNTTLTQQFSGNK-RLTEVRNLQAKLFDT 158

Query: 182 ENKS-----SLLRALLSS----------------HQ-----KDLTMMKNLFEKNAVSQND 215
             K+     S++   L                  HQ     ++L  ++ L EKN   +  
Sbjct: 159 RRKTIQDELSMIEETLDGLVGQTDNLNKIKGYRDHQFSLINRELGAIRALSEKNYYPKAQ 218

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   ER   + +  + E+I     +    NEL  +A      YL+E+  +L +NQ+  A 
Sbjct: 219 LLVLEREAAEISGSVSEDILNIAKLKSQQNELKIKAYQVRHQYLREVESELTENQKEVAM 278

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +L       +   I SPI G ++  +  +     Q  + LM IV   +   I AK+ 
Sbjct: 279 LEDELVSTRHELDNTEIRSPINGIVLDVKVSTVGGVIQPGEHLMDIVAAGQPMQIDAKIP 338

Query: 336 PKQIQHVKKGYTATVRFP--HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
              I  +  G T  V FP  ++A +     + +    D +I +       Q YY   +++
Sbjct: 339 VHAIDKLVPGLTVDVLFPALNHALLPSVPARVLTISADRLIDEATQ----QPYYLAEVQV 394

Query: 394 T-DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           + + A    + +++ G PA V       TL   +  P+
Sbjct: 395 SAEGARLLGDYKIKAGMPASVTIKTGERTLMSYLFKPL 432


>gi|254286106|ref|ZP_04961066.1| RTX toxin transporter [Vibrio cholerae AM-19226]
 gi|150423775|gb|EDN15716.1| RTX toxin transporter [Vibrio cholerae AM-19226]
          Length = 467

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 74/377 (19%), Positives = 161/377 (42%), Gaps = 50/377 (13%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +            I  L    + + + 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQ-------DITRLVSQAEFQTNE 146

Query: 117 L----DFLNNK---YDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           L      LN++   +D +  A  + ++ L+  ++L + +      F+  ++S+   +K+ 
Sbjct: 147 LIRYRTLLNDQLLTHDPMFTALPAEQQALIHENYLSEKNE-----FDSTLASITAEMKV- 200

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                    NR     + S + ALL   +   + L   K L +   +   +  +QE    
Sbjct: 201 ---------NRTSQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQE---- 247

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-L 283
           K  LE +  + +Q+  L  +   Y+        +  +  R+  + +R    +++ L   L
Sbjct: 248 KELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQEL 307

Query: 284 EKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            K RE++    I SP+ GT+     ++     Q +Q LM IVP +++     ++  K + 
Sbjct: 308 SKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVG 367

Query: 341 HVKKGYTATVR---FPH 354
            V  G + TV+   FP+
Sbjct: 368 FVYPGQSVTVKVDAFPY 384


>gi|194447155|ref|YP_002039182.1| hypothetical protein SeKA_B0008 [Salmonella enterica subsp.
          enterica serovar Kentucky str. CVM29188]
 gi|194358770|gb|ACF57212.1| hypothetical protein SeKA_B0008 [Salmonella enterica subsp.
          enterica serovar Kentucky str. CVM29188]
 gi|325495690|gb|EGC93552.1| hypothetical protein ECD227_4018 [Escherichia fergusonii ECD227]
          Length = 419

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 1/78 (1%)

Query: 16 SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
          +LK+M  ++I+ +IG+  +     I+I     G +  E++ +EIKSP SG I  F +  G
Sbjct: 14 ALKKM-FITILFVIGVFAYLFFSEIDIVSPGEGIVTGENDKIEIKSPNSGFINDFNIREG 72

Query: 76 SQILQGTPLLTFEDIETT 93
           Q+ +G  L T+ +++ T
Sbjct: 73 DQVSKGMILFTYTNLDYT 90


>gi|331010765|gb|EGH90821.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 445

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 79/428 (18%), Positives = 159/428 (37%), Gaps = 35/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G      W+ L P++  ++  G ++       ++S   G++ K  V  G  + +G
Sbjct: 27  ILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQSVKEG 86

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLD 140
            PL   +  +        +  +++LR       ++L    ++ D L++  F +  E +  
Sbjct: 87  GPLFRLDQTQV-------EADVQSLRAQYRMAWASLARWQSERDNLDEVHFPA--ELIAA 137

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALL 192
             G+       +   G   ++ S +  L R +S          L    +    S L A  
Sbjct: 138 GQGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQA 197

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S +K L+ ++ L +   +  N L + +R + +    L +N  E   + + I E      
Sbjct: 198 DSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQGIVESRLRLQ 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQS 305
            +   Y KE+       +  +AD   K   LE+       + +   IL+P  G  V    
Sbjct: 258 QQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNLGV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + L++IVP      +  ++  + I  V       + F  +   R  +   
Sbjct: 311 HTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVSG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     Q  +    Q YY +   + D A    N + ++ G PAE+       +L  
Sbjct: 371 EVNLIS--ADQMQDEKTGQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTGERSLLN 428

Query: 425 EIIHPITD 432
            +  P+ D
Sbjct: 429 YLFKPLLD 436


>gi|256829790|ref|YP_003158518.1| HlyD family type I secretion membrane fusion protein
           [Desulfomicrobium baculatum DSM 4028]
 gi|256578966|gb|ACU90102.1| type I secretion membrane fusion protein, HlyD family
           [Desulfomicrobium baculatum DSM 4028]
          Length = 480

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 93/427 (21%), Positives = 184/427 (43%), Gaps = 64/427 (14%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           ++W+   P++  V   G+++    +  I++   GI+K+  V  G  +  G  L+  + I+
Sbjct: 79  VSWAAYAPLDEVVRGIGKVIPSSEIKRIQNFEGGIVKEILVREGDLVGTGQLLILLDQIQ 138

Query: 92  T--------TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
                    +  +D   ++I  L   ++  +  +DF     D+L     S++  L++   
Sbjct: 139 MESRYREQQSGFLD-STLAIARLEAELNARED-IDF---PPDIL-----SQKPHLVENQR 188

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +   + +      +S + R  + +    +  + NR+D + ++  L  LL    K++ M++
Sbjct: 189 QLLRSRNDSRRAALSVLEREREQRSQEFKE-FKNRMDFQLRTHAL--LL----KEVDMIR 241

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           ++  K A S  DL + +R +   + E+ E+          +      A +E AN+   I 
Sbjct: 242 SMTAKGAASDMDLLRAQRELSDLSGEIAES---------RLAIPKAAAAVEGANH--RIE 290

Query: 264 RDLEQNQRTFADEMSK-----------LTILEKTREQKTILSPIAGTI--VYNQSFSSSN 310
            +  + +    DE+SK           L  LE   ++ ++ SP+ GT+  V+  +   + 
Sbjct: 291 EEKGKQRSAILDELSKIRTEMEGVKETLPALEDKMDRTSVRSPVDGTVKRVFVTTIGEAV 350

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
            A   + +++IVP      I AKV P+ I  +  G  A V+   Y          ++E I
Sbjct: 351 GA--GKEMLEIVPQEDTLLIEAKVLPQDIAFLYPGQAAEVKITAYDFSIYGSMPGVVEHI 408

Query: 371 --DPIISQQDNNLQTQEYYEVILKITDLAF----SDNNIELRNGFPAEV-LFTAKNTTLA 423
             D I  +Q+N      YY + ++ TD A        ++ +  G  AEV + T K T L 
Sbjct: 409 SADAITDEQEN----LSYYLIKVR-TDKASLKSRDGKDLPIIAGMVAEVDVLTGKKTVL- 462

Query: 424 QEIIHPI 430
           Q ++ PI
Sbjct: 463 QYLLKPI 469


>gi|159185693|ref|NP_357284.2| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
 gi|159140827|gb|AAK90069.2| secretion protein, HlyD family [Agrobacterium tumefaciens str. C58]
          Length = 452

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 93/450 (20%), Positives = 178/450 (39%), Gaps = 55/450 (12%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +S+    LL+  G  G   W+   P+  ++ + G  +   N   ++    GIIK+  V  
Sbjct: 31  SSIGLAVLLASFG--GFGYWAGTAPLSSAIIAQGSFVATGNNKVVQHLEGGIIKEMMVSE 88

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G  LLT +  +TT L + +   ++ LR      +   +         EK+F   
Sbjct: 89  GDTVKVGDVLLTLD--KTTALANERMFQLRRLRLETIVTRLRAEAQG------EKSF--- 137

Query: 135 EEQLLDFLGKYHSTCS-KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR-ALL 192
             ++ D + K  S    K      + V+ S  +KL       LN ++   KS   R A  
Sbjct: 138 --KVPDIVMKEASDPDIKSIIQSQNVVFHSKLVKLDEQ----LNLINKNIKSLEFRFAGY 191

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              ++       L  +   S+  L +   I     L L   I +    +  +    +++ 
Sbjct: 192 DGQKQSFDRQLALLTQERDSKERLAKDGVIRKTDMLALERAIADAMGDIARLTGEMNQSE 251

Query: 253 LEFANYLKEISRDLEQNQRTFADEM----SKL-TILEKTR------EQKTILSPIAGTIV 301
            E A + +E    +  N++   D +    S L ++ E+ R      E+  I SP+ GT++
Sbjct: 252 AEIAKFKQEAVIAVNANKQAALDALEIAESDLDSVREQVRGAAEVLERTVIRSPVNGTVI 311

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +        +P+M+I+P      + A+V    I  + +G TA +R          
Sbjct: 312 RAYYHTPGGVITTGKPIMEILPAHVPLILEAQVLRTSIDQLHEGQTAAIR---------- 361

Query: 362 KFKAIIEKIDPIIS-----------QQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGF 409
              A+  +  P+++           +++  LQ ++ Y V ++I+D   +  +N     G 
Sbjct: 362 -LSALNRRTTPVLNGKVFYVSADSIEENAGLQVKDVYIVRVQISDEEIAKVHNFHPVPGM 420

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           PA+VL      T  + +  PI D+  + F+
Sbjct: 421 PADVLIQTSERTFFEYLTKPIADSMSRAFK 450


>gi|307318642|ref|ZP_07598075.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|306895669|gb|EFN26422.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
          Length = 473

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 84/455 (18%), Positives = 176/455 (38%), Gaps = 59/455 (12%)

Query: 12  NHPASLKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N  + ++R+ +  +  I+    G   W+    +  +  +SG I+ +     +     G++
Sbjct: 47  NTHSPIRRLVIAGLTTILVAFGGFFGWAFSTELSSASVTSGTIIVDSKRKTVSHFEGGVL 106

Query: 68  KKFQVENGSQILQGTPLLTFEDIET-TDLIDL--KKVSIKNLRCHIDTEKSALDFLNNKY 124
            +  V+ G  +  G PL+  ED    +DL  L  ++V +      + +E++ L  ++   
Sbjct: 107 GRILVQEGDHVAPGQPLMKLEDTRARSDLQALQSRRVGLIAKLARLRSERAGLQTVSFPA 166

Query: 125 DVLEKA-------------FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           D++ K              FE R E     L     T  +         Y      LT  
Sbjct: 167 DLVSKVEAAADAVTAENAFFEKRSEAKKSRLAIQRKTIEE---------YSEKAKSLTAQ 217

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                 +++L N+     A+L        + K   +++ + + D    E    +  L   
Sbjct: 218 LQATDRQIELMNEQRTAIAIL--------VEKAFAQRSKLIEIDARLSELAATRGELA-G 268

Query: 232 ENIHEQKNMLRHINELYDEANLEFA------NYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +    +K M          A  E A      ++  EI+ ++   +   A+   ++T  E 
Sbjct: 269 DKAQAEKAM----------AGAELALIGIESDFQSEIAGEITTARLELAEVEQRITAAED 318

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              +  I +P AG +   Q  +  +     QPL+ IVP  +   +   V+ + I  +  G
Sbjct: 319 VLRRLEIRAPQAGIVANIQLRTPGSAVTPGQPLLDIVPEDEPLLVEMHVSTRDIDSITIG 378

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDN-NI 403
            +  +R   Y    ++    +  K+  I + Q  + ++   Y+    ++   + + N +I
Sbjct: 379 SSTQIRLTAY---NQRSHLPLEGKVTYIAADQSVDEKSNVAYFVARAEVAPESLAANPDI 435

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            L  G PAEVL   K+ +    ++ P++D++ + F
Sbjct: 436 RLYPGMPAEVLIVHKSRSAIDYLVAPVSDSFNRAF 470


>gi|254240270|ref|ZP_04933592.1| hypothetical protein PA2G_00914 [Pseudomonas aeruginosa 2192]
 gi|126193648|gb|EAZ57711.1| hypothetical protein PA2G_00914 [Pseudomonas aeruginosa 2192]
          Length = 337

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 121/276 (43%), Gaps = 39/276 (14%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNL-FEKNAVSQNDLNQQERIVYKS--------TLELREN 233
           N++S+LRA ++    ++   K++ F  +   +  L + ER ++KS        T  ++  
Sbjct: 52  NQASVLRAAIARLDAEVLGKKSIEFPPDVDPEGPLARSERELFKSRRDKLVEGTQAIQRQ 111

Query: 234 IHEQKNMLRHINELYDE------ANLEFANYLKEISRDLEQNQRTF--------ADEMSK 279
           IH  ++ L  +  L  +        L+ +  +  +S  L + + T+        A   + 
Sbjct: 112 IHLAQSQLDLVRPLVAKRAVSQMEALKLSQDIATLSGKLTELKSTYFQDAYTERAQRKAD 171

Query: 280 LTILEKTREQKT-------ILSPIAG---TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           L+ LE   +Q+        ILSP+ G   T++ N   +     Q  +P+M+++P  +   
Sbjct: 172 LSALEPIVQQRQDQLRRTEILSPVRGRVNTVLIN---TRGGVIQPGEPIMEVIPVEERLL 228

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + AK+ P+ +  +  G  A V+   Y        K  +E+I     ++D     + YY+V
Sbjct: 229 VEAKIKPRDVAFLVPGMPAKVKITAYDYTIYGDLKGTLEQISADTIEEDTPHGKESYYQV 288

Query: 390 ILKI--TDLAFSDNNIELRNGFPAEV-LFTAKNTTL 422
           ++K   + L   +  + +  G  AEV + + K + L
Sbjct: 289 LIKTDGSQLKRGEEVLPIIPGMVAEVDILSGKRSVL 324


>gi|257485393|ref|ZP_05639434.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289648884|ref|ZP_06480227.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|330987905|gb|EGH86008.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 445

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 79/428 (18%), Positives = 159/428 (37%), Gaps = 35/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G      W+ L P++  ++  G ++       ++S   G++ K  V  G  + +G
Sbjct: 27  ILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQSVKEG 86

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLD 140
            PL   +  +        +  +++LR       ++L    ++ D L++  F +  E +  
Sbjct: 87  EPLFRLDQTQV-------EADVQSLRAQYRMAWASLARWQSERDNLDEVHFPA--ELIAA 137

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALL 192
             G+       +   G   ++ S +  L R +S          L    +    S L A  
Sbjct: 138 GQGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQA 197

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S +K L+ ++ L +   +  N L + +R + +    L +N  E   + + I E      
Sbjct: 198 DSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQGIVESRLRLQ 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQS 305
            +   Y KE+       +  +AD   K   LE+       + +   IL+P  G  V    
Sbjct: 258 QQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNLGV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + L++IVP      +  ++  + I  V       + F  +   R  +   
Sbjct: 311 HTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVSG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     Q  +    Q YY +   + D A    N + ++ G PAE+       +L  
Sbjct: 371 EVNLIS--ADQMQDEKTGQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTGERSLLN 428

Query: 425 EIIHPITD 432
            +  P+ D
Sbjct: 429 YLFKPLLD 436


>gi|229523469|ref|ZP_04412874.1| RTX toxin transporter [Vibrio cholerae bv. albensis VL426]
 gi|229337050|gb|EEO02067.1| RTX toxin transporter [Vibrio cholerae bv. albensis VL426]
          Length = 467

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/377 (19%), Positives = 161/377 (42%), Gaps = 50/377 (13%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +            I  L    + + + 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQ-------DITRLVSQAEFQTNE 146

Query: 117 L----DFLNNK---YDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           L      LN++   +D +  A  + ++ L+  ++L + +      F+  ++S+   +K+ 
Sbjct: 147 LIRYRTLLNDQLLTHDPMFTALPAEQQALIHENYLSEKNE-----FDSTLASITAEMKV- 200

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                    NR     + S + ALL   +   + L   K L +   +   +  +QE    
Sbjct: 201 ---------NRTSQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQE---- 247

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-L 283
           K  LE +  + +Q+  L  +   Y+        +  +  R+  + +R    +++ L   L
Sbjct: 248 KELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQEL 307

Query: 284 EKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            K RE++    I SP+ GT+     ++     Q +Q LM IVP +++     ++  K + 
Sbjct: 308 SKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVG 367

Query: 341 HVKKGYTATVR---FPH 354
            V  G + TV+   FP+
Sbjct: 368 FVYPGQSVTVKVDAFPY 384


>gi|152982253|ref|YP_001353078.1| HlyD family secretion protein [Janthinobacterium sp. Marseille]
 gi|151282330|gb|ABR90740.1| HlyD family secretion protein, type I secretion pathway
           [Janthinobacterium sp. Marseille]
          Length = 457

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/412 (18%), Positives = 163/412 (39%), Gaps = 36/412 (8%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W+ L PI++ V   G I+  D+   I+    GI+    V  G+ + +   L+T  D+ 
Sbjct: 57  VIWAYLAPIDMVVRGQGRIVPSDHNQIIQHLEGGIVSAIVVREGAAVRKDQVLITIRDVR 116

Query: 92  TTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVL-EKAFESREEQLLDFLGKYHS 147
            +      +V +  LR  +     E      LN   D+L + A +S +        K + 
Sbjct: 117 ASSDQGEGRVKLLGLRARVARLTAEAGGATQLNLPADMLADPAGQSEQAAFAARQAKLNG 176

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             S +     +     L   ++R +S       L ++ +L+       Q+   ++ +++ 
Sbjct: 177 ELS-ILREQTTQRQAELNETISRQKS-------LTDEYALV-------QQQYQLVHSMYL 221

Query: 208 KNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           K+A SQ  D+  Q R       ++R  +    +M+  +     EA  +  + +     + 
Sbjct: 222 KSAASQLEDIQAQSR-----AQDVRSRLSAASSMIPRLRAAISEAQAKVTDGVSRFRAEA 276

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTI--VYNQSF--SSSNYAQQSQPLMKIV 322
             +  T   E+++L+   K+R  + + S +   +  V N+ F  +     +   P++++ 
Sbjct: 277 RADLTTAETELARLSEEMKSRNDRVLRSEVKAPMDGVVNRIFVNTVGGVVKPGDPILEMT 336

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P      + A + P     +  G  A V+   Y       F ++  K+  I +      +
Sbjct: 337 PIDDKVVVEANINPTDRAELAIGKPARVKVTAY---DYGVFGSMQGKVTEISADTVPEEK 393

Query: 383 TQEYYEVILKIT----DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            + +Y V +++T     +  + N++ L  G  A         T+ Q ++ PI
Sbjct: 394 GERHYRVKIEVTRDPEQIKSAGNSLPLMPGMTATADIVVGRRTVWQYLMSPI 445


>gi|15641458|ref|NP_231090.1| RTX toxin transporter [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121588035|ref|ZP_01677786.1| RTX toxin transporter [Vibrio cholerae 2740-80]
 gi|121728451|ref|ZP_01681477.1| RTX toxin transporter [Vibrio cholerae V52]
 gi|147674597|ref|YP_001217003.1| RTX toxin transporter [Vibrio cholerae O395]
 gi|153801720|ref|ZP_01956306.1| RTX toxin transporter [Vibrio cholerae MZO-3]
 gi|153817913|ref|ZP_01970580.1| RTX toxin transporter [Vibrio cholerae NCTC 8457]
 gi|153822678|ref|ZP_01975345.1| RTX toxin transporter [Vibrio cholerae B33]
 gi|153829728|ref|ZP_01982395.1| RTX toxin transporter [Vibrio cholerae 623-39]
 gi|227081619|ref|YP_002810170.1| RTX toxin transporter [Vibrio cholerae M66-2]
 gi|229504978|ref|ZP_04394488.1| membrane-fusion protein [Vibrio cholerae BX 330286]
 gi|229511353|ref|ZP_04400832.1| membrane-fusion protein [Vibrio cholerae B33]
 gi|229518471|ref|ZP_04407915.1| membrane-fusion protein [Vibrio cholerae RC9]
 gi|229607981|ref|YP_002878629.1| membrane-fusion protein [Vibrio cholerae MJ-1236]
 gi|254226274|ref|ZP_04919866.1| RTX toxin transporter [Vibrio cholerae V51]
 gi|254848567|ref|ZP_05237917.1| RTX toxin transporter [Vibrio cholerae MO10]
 gi|298498474|ref|ZP_07008281.1| RTX toxin transporter [Vibrio cholerae MAK 757]
 gi|298499370|ref|ZP_07009176.1| RTX toxin transporter [Vibrio cholerae MAK 757]
 gi|4455068|gb|AAD21060.1| RtxD protein [Vibrio cholerae]
 gi|9655947|gb|AAF94604.1| RTX toxin transporter [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121547730|gb|EAX57822.1| RTX toxin transporter [Vibrio cholerae 2740-80]
 gi|121629275|gb|EAX61710.1| RTX toxin transporter [Vibrio cholerae V52]
 gi|124122744|gb|EAY41487.1| RTX toxin transporter [Vibrio cholerae MZO-3]
 gi|125621188|gb|EAZ49530.1| RTX toxin transporter [Vibrio cholerae V51]
 gi|126511540|gb|EAZ74134.1| RTX toxin transporter [Vibrio cholerae NCTC 8457]
 gi|126519798|gb|EAZ77021.1| RTX toxin transporter [Vibrio cholerae B33]
 gi|146316480|gb|ABQ21019.1| RTX toxin transporter [Vibrio cholerae O395]
 gi|148874807|gb|EDL72942.1| RTX toxin transporter [Vibrio cholerae 623-39]
 gi|227009507|gb|ACP05719.1| RTX toxin transporter [Vibrio cholerae M66-2]
 gi|227013363|gb|ACP09573.1| RTX toxin transporter [Vibrio cholerae O395]
 gi|229345186|gb|EEO10160.1| membrane-fusion protein [Vibrio cholerae RC9]
 gi|229351318|gb|EEO16259.1| membrane-fusion protein [Vibrio cholerae B33]
 gi|229357201|gb|EEO22118.1| membrane-fusion protein [Vibrio cholerae BX 330286]
 gi|229370636|gb|ACQ61059.1| membrane-fusion protein [Vibrio cholerae MJ-1236]
 gi|254844272|gb|EET22686.1| RTX toxin transporter [Vibrio cholerae MO10]
 gi|297541351|gb|EFH77402.1| RTX toxin transporter [Vibrio cholerae MAK 757]
 gi|297542807|gb|EFH78857.1| RTX toxin transporter [Vibrio cholerae MAK 757]
          Length = 467

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/377 (19%), Positives = 161/377 (42%), Gaps = 50/377 (13%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +            I  L    + + + 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQ-------DITRLVSQAEFQTNE 146

Query: 117 L----DFLNNK---YDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           L      LN++   +D +  A  + ++ L+  ++L + +      F+  ++S+   +K+ 
Sbjct: 147 LIRYRTLLNDQLLTHDPMFTALPAEQQALIHENYLSEKNE-----FDSTLASITAEMKV- 200

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                    NR     + S + ALL   +   + L   K L +   +   +  +QE    
Sbjct: 201 ---------NRTSQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQE---- 247

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-L 283
           K  LE +  + +Q+  L  +   Y+        +  +  R+  + +R    +++ L   L
Sbjct: 248 KELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQEL 307

Query: 284 EKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            K RE++    I SP+ GT+     ++     Q +Q LM IVP +++     ++  K + 
Sbjct: 308 SKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVG 367

Query: 341 HVKKGYTATVR---FPH 354
            V  G + TV+   FP+
Sbjct: 368 FVYPGQSVTVKVDAFPY 384


>gi|37222090|gb|AAP76486.1| AprE [uncultured bacterium]
          Length = 449

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 77/443 (17%), Positives = 171/443 (38%), Gaps = 30/443 (6%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H ++ +  +R+     +   +L+I+G      W+ L P++  +   G ++       ++S
Sbjct: 16  HDYLAERPERDAGYFARLGWILAIVGAGSFFAWASLAPLDQGIPVQGTVVVSGKRKAVQS 75

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             +G++ +  V +G  + QG PL   +  +           +++LR       ++L    
Sbjct: 76  MSNGVVSQILVRDGQVVKQGQPLFQLDQTQVA-------ADVQSLRAQYRMAWASLARWQ 128

Query: 122 NKYDVLEKA---------FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           ++ D L++           + R   +L+   +  S+    F+   +++  S++    ++ 
Sbjct: 129 SERDNLKQVNFPAELSNDPDPRLALVLEGQRQLFSSRRDAFSREQAALRASIEGAGAQLA 188

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +   R DL  ++  L       Q+ L+ ++ L +   + +N L + +R + +   +L E
Sbjct: 189 GMRRARTDLTAQADSL-------QQQLSNLQPLADNGYIPRNRLMEYQRQLSQVQQQLAE 241

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           N  E   + + I E   +       Y KE+   L   Q        +LT      +   I
Sbjct: 242 NTGESGRVEQGILESRLKLQQHIEEYQKEVRTQLADAQLKSVTLEEQLTSAGFDLQHSEI 301

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++   G  V     +     +Q + L++IVP      +   +    I  V       + F
Sbjct: 302 IATADGVAVNLAVHTVGAVVRQGETLLEIVPQGTQLEVEGHLPVNLIDKVGTHLPVDILF 361

Query: 353 PHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGF 409
             +   R  +    +  I  D +I ++        YY +   ++D A    N + ++ G 
Sbjct: 362 TAFNQSRTPRVPGEVSLISADQMIDEKTGA----PYYVLRSSVSDQAMEKLNGLVIKPGM 417

Query: 410 PAEVLFTAKNTTLAQEIIHPITD 432
           PAE+       +L   +  P+ D
Sbjct: 418 PAEMFVRTGERSLLNYLFKPLLD 440


>gi|307303507|ref|ZP_07583261.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
 gi|306902898|gb|EFN33490.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
          Length = 473

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 92/448 (20%), Positives = 174/448 (38%), Gaps = 55/448 (12%)

Query: 17  LKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           ++R+ +  +  I+    G   W+    +  +  +SG I+ +     I     G++ +  V
Sbjct: 52  IRRLVIAGLTTILVAFGGFFGWAFSTELSSASVTSGTIVVDSKRKTISHFEGGVLGRILV 111

Query: 73  ENGSQILQGTPLLTFEDIET-TDLIDL--KKVSIKNLRCHIDTEKSALDFLNNKYDVL-- 127
           + G  +  G PL+  ED    +DL  L  ++V +      +  E++ L  ++   D++  
Sbjct: 112 QEGDHVAPGQPLMKLEDTRARSDLQALQSRRVGLIAKLARLRAERAGLHAVSFPADLISE 171

Query: 128 ----------EKAF-ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIY 175
                     EKAF E R E     L     T  +      S   +SL  +L    R I 
Sbjct: 172 GEAAADAVTAEKAFFEKRSEAKESRLAIQRKTIEEY-----SEKAKSLTAQLQATDRQIE 226

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS---QNDLNQQERIVYKSTLELRE 232
           L        ++L+    +   K + +   L E  A       D  Q E+ +  + L L  
Sbjct: 227 LMNEQRTAIATLVEKAFAQRSKLIEIDARLSELAATRGELAGDKAQAEKAMAGAELAL-- 284

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            I  + +    I      A LE A        ++EQ      D + +L I          
Sbjct: 285 -IGIESDFQSEIAGEITTARLELA--------EVEQRIAAAEDVLRRLEIR--------- 326

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P AG +   Q  +  +     QPL+ IVP  +   +   V+ + I  +  G +  +R 
Sbjct: 327 -APQAGIVANIQLRTPGSAVTPGQPLLDIVPEDEPLLVEMHVSTRDIDSITIGSSTQIRL 385

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDN-NIELRNGFP 410
             Y    ++    +  K+  I + Q  + ++   Y+    ++   + + N +I L  G P
Sbjct: 386 TAY---NQRSHLPLEGKVTYIAADQSVDEKSNVAYFVARAEVAPESLAANPDIRLYPGMP 442

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           AEVL   K+ +    ++ P++D++ + F
Sbjct: 443 AEVLIVHKSRSAIDYLVAPVSDSFNRAF 470


>gi|297579035|ref|ZP_06940963.1| RTX toxin ABC transporter [Vibrio cholerae RC385]
 gi|297536629|gb|EFH75462.1| RTX toxin ABC transporter [Vibrio cholerae RC385]
          Length = 467

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/377 (19%), Positives = 161/377 (42%), Gaps = 50/377 (13%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +            I  L    + + + 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQ-------DITRLVSQAEFQTNE 146

Query: 117 L----DFLNNK---YDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           L      LN++   +D +  A  + ++ L+  ++L + +      F+  ++S+   +K+ 
Sbjct: 147 LIRYRTLLNDQLLTHDPMFTALPAEQQALIHENYLSEKNE-----FDSTLASITAEMKV- 200

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                    NR     + S + ALL   +   + L   K L +   +   +  +QE    
Sbjct: 201 ---------NRTSQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQE---- 247

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-L 283
           K  LE +  + +Q+  L  +   Y+        +  +  R+  + +R    +++ L   L
Sbjct: 248 KELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQEL 307

Query: 284 EKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            K RE++    I SP+ GT+     ++     Q +Q LM IVP +++     ++  K + 
Sbjct: 308 SKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVG 367

Query: 341 HVKKGYTATVR---FPH 354
            V  G + TV+   FP+
Sbjct: 368 FVYPGQSVTVKVDAFPY 384


>gi|330503962|ref|YP_004380831.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           mendocina NK-01]
 gi|328918248|gb|AEB59079.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           mendocina NK-01]
          Length = 452

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 81/383 (21%), Positives = 160/383 (41%), Gaps = 45/383 (11%)

Query: 17  LKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           L R+T+ ++   ++  + W+    +E   +  G+ +    V  I++   GI+ +  V  G
Sbjct: 38  LSRITVWAVSACLLTALAWAHFAVLEEVTTGEGKAIPSSKVQVIQNLEGGIVSEIFVREG 97

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  LL  +D              + L    +TE   L  +  + + L    E RE
Sbjct: 98  QVVDKGDTLLRLDDT-------------RFLSNRGETEADRLALMA-RLERLSAEAEGRE 143

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL--------DLENKSSL 187
            +L + + +     ++       ++YRS + +L   +     +L        +  +K+  
Sbjct: 144 PRLPEQIAQGAPQLAE----DELALYRSRQQRLQSEQRTLGEQLRQKEQELAEFRSKAQQ 199

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN-------IHEQKNM 240
            R+ L   Q++L M + L    A+SQ ++ +    + +S +ELR +       I   +  
Sbjct: 200 YRSSLGLLQEELNMSQPLVASGAISQVEVLR----LRRSLVELRGSLEATNLAIPRAEAA 255

Query: 241 LRHINELYDEANLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           +  I    DE+ L F ++  KE++    + Q+  A  ++    +E    + T+ SP+ G 
Sbjct: 256 MSEIKSKMDESELSFRSDAFKELNEVRTELQKITATSVA----IEDKVTRTTVTSPVRGV 311

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I   +  +     Q    +++IVP      I AKV P+ +  +  G  A V+F  Y    
Sbjct: 312 IKQLKVNTIGGVVQPGSDMLEIVPLDDSLLIEAKVRPQDVAFLHPGQKAMVKFTAYDYTI 371

Query: 360 EKKFKAIIEKI--DPIISQQDNN 380
               KA +E I  D I  ++ N+
Sbjct: 372 YGGLKANLELISADTITDEEGNS 394


>gi|229529483|ref|ZP_04418873.1| RTX toxin transporter [Vibrio cholerae 12129(1)]
 gi|229333257|gb|EEN98743.1| RTX toxin transporter [Vibrio cholerae 12129(1)]
          Length = 467

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/377 (19%), Positives = 161/377 (42%), Gaps = 50/377 (13%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +            I  L    + + + 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQ-------DITRLVSQAEFQTNE 146

Query: 117 L----DFLNNK---YDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           L      LN++   +D +  A  + ++ L+  ++L + +      F+  ++S+   +K+ 
Sbjct: 147 LIRYRTLLNDQLLTHDPMFTALPAEQQALIHENYLNEKNE-----FDSTLASITAEMKV- 200

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                    NR     + S + ALL   +   + L   K L +   +   +  +QE    
Sbjct: 201 ---------NRTSQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQE---- 247

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-L 283
           K  LE +  + +Q+  L  +   Y+        +  +  R+  + +R    +++ L   L
Sbjct: 248 KELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQEL 307

Query: 284 EKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            K RE++    I SP+ GT+     ++     Q +Q LM IVP +++     ++  K + 
Sbjct: 308 SKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVG 367

Query: 341 HVKKGYTATVR---FPH 354
            V  G + TV+   FP+
Sbjct: 368 FVYPGQSVTVKVDAFPY 384


>gi|152984404|ref|YP_001348769.1| putative secretion protein [Pseudomonas aeruginosa PA7]
 gi|150959562|gb|ABR81587.1| probable secretion protein [Pseudomonas aeruginosa PA7]
          Length = 395

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 91/430 (21%), Positives = 173/430 (40%), Gaps = 82/430 (19%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L   HP  + R  L +++G + L I W+    ++      G ++    + +I+S   GI+
Sbjct: 19  LAATHP--VYRPLLWTLLGCVLLFIGWAAWAQLDEVTRGDGRVVPFSRIQKIQSLEGGIL 76

Query: 68  KKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
            +  V+ G  +  G PL+  ++        E+ +   + + +I  L   +   KS ++F 
Sbjct: 77  DRLLVKEGDLVEVGQPLVRLDETRFLTNFQESANQASVLRAAIARLDAEVLGRKS-IEF- 134

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               DV      +R E+ L                     ++S + KL            
Sbjct: 135 --PPDVDPDGPLARSEREL---------------------FKSRRDKL------------ 159

Query: 181 LENKSSLLRAL-LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           LE   ++ R + L+  Q DL  ++ L  K AVSQ +            L+L ++I     
Sbjct: 160 LEGSQAIQRQIHLAQSQLDL--VRPLVAKRAVSQME-----------ALKLSQDIATLSG 206

Query: 240 MLRHINELY-DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            L  +   Y  +A  E A    ++S  LE   +   D++ +            ILSP+ G
Sbjct: 207 KLTELKSTYFQDAYTERAQRKADLS-ALEPIVQQRQDQLRR----------TEILSPVRG 255

Query: 299 ---TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
              T++ N   +     Q  +P+M+++P  +   + AK+ P+ +  +  G  A V+   Y
Sbjct: 256 RVNTVLIN---TRGGVIQPGEPIMEVIPVEERLLVEAKIKPRDVAFLVPGMPAKVKITAY 312

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEV 413
                   K  +E+I     ++D     + YY+V++K   + L   +  + +  G  AEV
Sbjct: 313 DYTIYGDLKGTLEQISADTIEEDTPHGKESYYQVLIKTDGSQLKRGEEVLPIIPGMVAEV 372

Query: 414 -LFTAKNTTL 422
            + + K + L
Sbjct: 373 DILSGKRSVL 382


>gi|262164570|ref|ZP_06032308.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio mimicus VM223]
 gi|262026950|gb|EEY45617.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio mimicus VM223]
          Length = 496

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 87/436 (19%), Positives = 176/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  ITW+    I+      G+++    V  I++   G++K+  
Sbjct: 60  NTPHSARIILWVMVAFFILAITWAAWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 119

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 120 VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDEDF 174

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 175 EEK-----NWTNSVRLDYSKLAFPPVLSDAQPEL---VDRQRDQYRQDLDNLRNQLSVLS 226

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 227 QQIKQKQQDLIEAEARVVNLRQSYNFAKKELDITEPLANEGVVPKIELLKLQRQLNDTRR 286

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 287 ELTSTELKIPVLKAAVREALLSRINAAQKFRTEQQDKLNQAQDKLSALTESAVGLEDKVN 346

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 347 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPELPA 406

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 407 IVKFTAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDENLPIIP 463

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 464 GMTASVDIITGKRTVL 479


>gi|163800215|ref|ZP_02194116.1| putative protein secretion protein [Vibrio sp. AND4]
 gi|159175658|gb|EDP60452.1| putative protein secretion protein [Vibrio sp. AND4]
          Length = 446

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 92/458 (20%), Positives = 197/458 (43%), Gaps = 42/458 (9%)

Query: 1   MHHFMWKNLKRNHPAS---LKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNE 53
           ++ F  + + R  P+S   LK   LL ++ +     GL  W+    +E +  + G++   
Sbjct: 8   VNEFAAEQVFRFLPSSELRLKGPILLGVLALTLFLGGLGYWAATAKLESAAIAYGDLSVL 67

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
               EI+    GII+K  V+ G  + +G  LL     +    +D    ++     H   +
Sbjct: 68  SQNQEIQHLEGGIIEKIYVQEGDLVKKGQLLLQLSKRQANAKLD----ALSGQYIHTIAK 123

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-R 172
           ++ L+    ++  +  A +    Q  + + +     SK+F    ++  R    KL  + +
Sbjct: 124 ENRLNAELEEFSEIHWAKDLETIQNTEIVAEAKLVQSKIF----AARKRFFGSKLNIIAK 179

Query: 173 SIYLNRLDLENKSS---LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           SI    L+L+N S    + R  L   ++++   + L +K    ++ L Q +R+    + E
Sbjct: 180 SISGAHLELDNLSETKIIERERLKFIEEEIASNQALVQKGFSGKSTLLQLKRL----SAE 235

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +R  + +       +++  DE   +      E   D+ ++ R    EM  ++I E+ R  
Sbjct: 236 VRSTLSQLDRQSLTVSKRLDENQAKIEELQLERLNDIVEDLRNTKKEM--VSIREEYRSA 293

Query: 290 K------TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           K      +I++PI+G IV  Q F+ +      + L+++VP      + A+V+P+ I  + 
Sbjct: 294 KDIVARTSIVAPISGRIVNMQVFTENGVIGSGETLLELVPQDDNLLVEARVSPQDIDLIT 353

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G  A +R      +  +    +   +  + + + +     ++Y     +  +A S  ++
Sbjct: 354 SGQHAQIRLTA---LNARTLAPLEGTVLTVSADKLSERNQDDFY-----LARIALSQEDV 405

Query: 404 ---ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               L +G  AEVL  ++  T    ++ P+T++  + F
Sbjct: 406 AKYSLTSGMNAEVLILSEPRTPLSYLVKPLTESMNRAF 443


>gi|332186552|ref|ZP_08388296.1| type I secretion membrane fusion , HlyD family protein
           [Sphingomonas sp. S17]
 gi|332013535|gb|EGI55596.1| type I secretion membrane fusion , HlyD family protein
           [Sphingomonas sp. S17]
          Length = 448

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 86/441 (19%), Positives = 164/441 (37%), Gaps = 60/441 (13%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++GL  W+ L  ++ + +  G++    N   ++    GI+K   V +G  +  G  L   
Sbjct: 35  VVGL-GWAALARLDAAAAGEGQVTVSGNRRTVQHRDGGIVKAMLVRDGEHVRAGQILFRL 93

Query: 88  EDIETTDLIDLKKVSIKNL---RCHIDTEKSA------LDFLNNKYDVLEKAFESREEQL 138
           E  E          S+ +L   R  ++ E +        DF     D       ++  QL
Sbjct: 94  EGAEVAASERALAASVIDLQAQRARLEAEIAGHAIVWPADFATATGDDRRLVERAKALQL 153

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL--ENKSSLLRALLSSHQ 196
                +  +  +         V R    ++ +  + Y  + D     ++SL++ L S+  
Sbjct: 154 AQLRSRNAALAAS------DQVLRQQAAEVGKQTTGYNAQADATARQRASLMQQLEST-- 205

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIV---------YKS-TLELRENIHEQKNMLRHINE 246
                 + L ++  VS+N +   ER +         Y S +   RE I + +  +     
Sbjct: 206 ------RKLADEGYVSRNTVRAIERSIQQLEGADADYSSRSAAAREQIGQTRAQMVQTRR 259

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              E   E A  L++    L +    +A    +L   E       I +P++G +V  + F
Sbjct: 260 RQVE---EAATALRDTQFQLNEMLPKWAAARDQLARTE-------IRAPVSGRVVGLRVF 309

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q  QP++ IVP +    +RA   P  I  V  G  A V+F    D   +    +
Sbjct: 310 TVGGVIQAGQPILDIVPDAAPLIVRANFAPGDIDGVIAGRPAEVKFLSLHD---RGLPIL 366

Query: 367 IEKIDPIISQQDNNLQTQEYY---------EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
              +  + +    +  +   Y         E I +I ++   D  I  R G P  V    
Sbjct: 367 AGTVRSVSADSLRDEASGRSYFTAEIAVPREQIARIAEVRGGDTGI--RAGVPVAVTVPL 424

Query: 418 KNTTLAQEIIHPITDNWPKIF 438
           +  +  Q ++ P+T+ + + F
Sbjct: 425 RPRSALQYLLDPLTETFARSF 445


>gi|29421530|gb|AAO73505.1| RsaE [Caulobacter vibrioides]
          Length = 419

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/344 (17%), Positives = 146/344 (42%), Gaps = 30/344 (8%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L+ +G++G   W+   P++ +V ++G +  + N   I+    G++ K  V  G ++  G 
Sbjct: 26  LTFVGVLG---WAAFAPLDSAVIANGVVTTDANKT-IQHLEGGMLSKILVREGERVKAGQ 81

Query: 83  PLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALDFLNNKYDVL-EKAFESREEQL 138
            L   +  +        +   V+ + L   +  E+     ++   ++L ++A       L
Sbjct: 82  VLFQLDPTQVNAAAGTTRAQYVAFRALEARLVAERDQRPTISFPTELLTQRADPVVARAL 141

Query: 139 LD----FLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRAL 191
           +D    F+ +  +   +V  FN                 R+ + + +D +E ++  L+  
Sbjct: 142 IDEQSRFIERRQTIQGQVDLFNA---------------QRAQFKSEIDGIERQAQGLKEQ 186

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L   Q++L  ++ ++EK  V +  +   ER     +  L +   ++   ++ + E   + 
Sbjct: 187 LGFLQEELGDIRKIYEKGLVPRPRILALERETGSLSGALGQLNADRSKAIQGMGETQLKI 246

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 + +E+S  + + +   A+   +  +   ++++  I+SP+ G     + F+    
Sbjct: 247 RQIREQFFEEVSEAIAETRVQLAEVSEREVLAADSQKRVNIVSPVNGVAQALRFFTEGPV 306

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            + ++PL+ I P  +   I A+  P  + ++ +G    VR P +
Sbjct: 307 VRSAEPLVDIAPDERSLKIHAQFAPTDVDNIHEGMVTEVRLPSF 350


>gi|83941971|ref|ZP_00954433.1| putative toxin secretion transmembrane protein [Sulfitobacter sp.
           EE-36]
 gi|83847791|gb|EAP85666.1| putative toxin secretion transmembrane protein [Sulfitobacter sp.
           EE-36]
          Length = 438

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 86/428 (20%), Positives = 170/428 (39%), Gaps = 43/428 (10%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           L  W+    I  +V ++G+I        I++   G++ +  V+NG  +  G  L  F+  
Sbjct: 31  LGGWAATTQISGAVIATGQIDVAGKPKVIQTVDGGVLAELPVQNGDIVKAGQVLARFD-- 88

Query: 91  ETTDLIDLKKVSIK-----NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            T   IDL+    +      LR  ++ E+   +    ++D ++         L   +G  
Sbjct: 89  ATILQIDLRMARARLAEAAGLRARLEAERD--ESPAPRFDAID---------LPPKIGAL 137

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDLTMMKN 204
             T ++    G ++++ +       MR+   + L D+E +++ L   +S+ ++ L ++  
Sbjct: 138 DMTQAQA---GQAAIFEARAQMRAGMRARMASDLADVETQATGLNGQISALEQQLAILTT 194

Query: 205 -------LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK-NMLRHINELYDEANLEFA 256
                  L EK    Q  L+Q    +  +   LR ++  ++ ++ R I++ +    LE  
Sbjct: 195 ELRSLTRLVEKGLAPQVRLSQ----LQSTRAGLRGDLAARRADLARLIHQRW-TLKLESL 249

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK----TILSPIAGTIVYNQSFSSSNYA 312
              +     +    R    E+ +LT+   TR+ +     I +P+ G +   ++ +     
Sbjct: 250 QADRRFQEQVALQLREVTAEVQELTLSILTRQAQLDRIAIRAPVDGMVHELRATTVGAVV 309

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                LM IVP         +V P+ I  V+    AT+    +      K    +  I P
Sbjct: 310 GAGATLMDIVPQQSKFEFEVQVDPRSINLVRYDQPATLVLTAFDPHTTPKLTGSVYSISP 369

Query: 373 IISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +     N     +Y VIL I  T+L     ++ L  G P E     K+ T+   +  PI
Sbjct: 370 QVVVDPRN--GGSFYRVILDIPRTELDRLPASVRLVPGMPIEAFLKTKDRTVLSYLAEPI 427

Query: 431 TDNWPKIF 438
           +    + F
Sbjct: 428 SSQLRRGF 435


>gi|229515812|ref|ZP_04405271.1| membrane-fusion protein [Vibrio cholerae TMA 21]
 gi|229347581|gb|EEO12541.1| membrane-fusion protein [Vibrio cholerae TMA 21]
          Length = 467

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 74/377 (19%), Positives = 160/377 (42%), Gaps = 50/377 (13%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +            I  L    + + + 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQ-------DITRLVSQAEFQTNE 146

Query: 117 L----DFLNNK---YDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           L      LN +   +D +  A  + ++ L+  ++L + +      F+  ++S+   +K+ 
Sbjct: 147 LIRYRTLLNGQLLTHDPMFTALPAEQQALIHENYLSEKNE-----FDSTLASITAEMKV- 200

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                    NR     + S + ALL   +   + L   K L +   +   +  +QE    
Sbjct: 201 ---------NRTSQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQE---- 247

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-L 283
           K  LE +  + +Q+  L  +   Y+        +  +  R+  + +R    +++ L   L
Sbjct: 248 KELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQEL 307

Query: 284 EKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            K RE++    I SP+ GT+     ++     Q +Q LM IVP +++     ++  K + 
Sbjct: 308 SKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVG 367

Query: 341 HVKKGYTATVR---FPH 354
            V  G + TV+   FP+
Sbjct: 368 FVYPGQSVTVKVDAFPY 384


>gi|89067836|ref|ZP_01155280.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Oceanicola granulosus HTCC2516]
 gi|89046434|gb|EAR52490.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Oceanicola granulosus HTCC2516]
          Length = 390

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/405 (18%), Positives = 150/405 (37%), Gaps = 74/405 (18%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            + W+   P++  V   GE+++      +++   GI+ +  V  G  + +G  L      
Sbjct: 30  FLVWARFAPLDEIVRGQGEVVSGARPQSVQNLEGGILAELAVGEGDMVSEGDVLARLHGT 89

Query: 91  E-TTDLIDLK----KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           +  T + DL+       I+ LR   + E    DF+  +                      
Sbjct: 90  QFVTRVDDLRDQVIAAEIRRLRLEAELEGQ-FDFVVPE---------------------- 126

Query: 146 HSTCSKVFNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                   +Y I S  +  S +  L   +S Y  RL+        R L +   ++L  ++
Sbjct: 127 --------DYAIHSPDILASERALLAARQSDYTTRLEG------ARRLATETARELETLE 172

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           +LF ++ V+               LE+ E      +    ++E+   A LE A    E  
Sbjct: 173 DLFARDIVA--------------LLEVTEARKANSDAETKVSEIETTAELERATSYSETL 218

Query: 264 RDL---EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
            DL   +Q  R   D++++            + +P+ G +      +     +  + + +
Sbjct: 219 LDLATLKQELRLAEDQLAR----------TVVRAPMRGVVNAVGVTTIGGVVRPGEEMFE 268

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           I+P     ++ A++ PK I +V  G  AT++   Y        +  +E +     + +  
Sbjct: 269 IIPAGDELFVEAQIAPKDIANVVAGQAATIKLTAYDYTVHGSLEGTVEMVSADTFKDERR 328

Query: 381 LQTQEYYEVILKITDLAFSDN--NIELRNGFPAEV-LFTAKNTTL 422
            +++ +Y V + +   A +     I LR G  A V L T   T L
Sbjct: 329 PESEAHYRVTVALDTDAMTPRQAGISLRPGMQATVELHTGSKTVL 373


>gi|113968726|ref|YP_732519.1| HlyD family type I secretion membrane fusion protein [Shewanella
           sp. MR-4]
 gi|114049131|ref|YP_739681.1| HlyD family type I secretion membrane fusion protein [Shewanella
           sp. MR-7]
 gi|113883410|gb|ABI37462.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           sp. MR-4]
 gi|113890573|gb|ABI44624.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           sp. MR-7]
          Length = 460

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 76/374 (20%), Positives = 152/374 (40%), Gaps = 34/374 (9%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++  + W+    ++   + SG+++    V  I+S   GI+++  V  G  + +G PL+  
Sbjct: 39  VVCFLLWAGFAQLDKVTTGSGKVIPSSQVQVIQSLDGGIMQELYVREGDIVTKGQPLVRI 98

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL---------NNKYDVLEKAF---ESRE 135
           +D         ++  +  L+ ++   ++ LD +           +  + +KA    ES  
Sbjct: 99  DDTRFRSDFAQQEQEVFGLKTNVIRMRAELDSILISDMTSDWREQVKITKKALVFPESLT 158

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E     + +        +N  + ++   L++ + +++       DL +K++ L   +   
Sbjct: 159 EAEPALVKRQQEE----YNGRLDNLSNQLEILVRQIQQRQQEIDDLASKTTTLTTSMQLI 214

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR----HINELYDEA 251
            ++L + + L +K  V + +L + ER V  +  EL        N LR     +    DEA
Sbjct: 215 SRELELTRPLAKKGIVPEVELLKLERAVNDAQGEL--------NSLRLLRPKLKAALDEA 266

Query: 252 NLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVYNQSF 306
            L+       Y  ++   L + Q T    M++  +  + +  K I+ SP+ GTI      
Sbjct: 267 ILKRREAVFVYAADLRAQLNETQ-TRLSRMNEAQVGAQDKVSKAIITSPVNGTIKSVHIN 325

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    +++IVP      I  K+ PK I  +  G  A V+   Y   R    K  
Sbjct: 326 TLGGVVQPGVDIVEIVPSEDQLLIETKILPKDIAFLHTGLPAVVKVTAYDFTRYGGLKGT 385

Query: 367 IEKIDPIISQQDNN 380
           +E I    SQ +  
Sbjct: 386 VEHISADTSQDEEG 399


>gi|46201630|ref|ZP_00208183.1| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 456

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 1/106 (0%)

Query: 287 REQKT-ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           RE ++ I SP+ G +  +   S    A+    LM IVP      + AKV P+ I H++ G
Sbjct: 279 RESRSEIRSPVRGIVKMSAIASVGQVAKPGDTLMDIVPVDDTLVVEAKVPPQDIGHLRPG 338

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             A+VR   Y   R       +  +     ++   + T  YY+V++
Sbjct: 339 LAASVRLSAYDQFRFGALPGRVVMVGADSFEETKGVTTATYYKVLI 384


>gi|289679132|ref|ZP_06500022.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae FF5]
          Length = 445

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 79/428 (18%), Positives = 159/428 (37%), Gaps = 35/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G      W+ L P++  ++  G ++       ++S   G++ K  V  G  + +G
Sbjct: 27  ILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQLVKEG 86

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLD 140
            PL   +  +        +  +++LR       ++L    ++ D L++  F +  E +  
Sbjct: 87  EPLFRLDQTQV-------EADVQSLRAQYRMAWASLARWQSERDNLDEVRFPA--ELIAA 137

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALL 192
             G+       +   G   ++ S +  L R +S          L    +    S L A  
Sbjct: 138 GQGQDPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLMAQA 197

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S +K L+ ++ L +   +  N L + +R + +    L +N  E   + + I E      
Sbjct: 198 DSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQGIVESRLRLQ 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQS 305
            +   Y KE+       +  +AD   K   LE+       + +   IL+P  G  V    
Sbjct: 258 QQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNLGV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + L++IVP      +  ++  + I  V       + F  +   R  +   
Sbjct: 311 HTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVSG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     Q  +    Q YY +   + D A    N + ++ G PAE+       +L  
Sbjct: 371 EVSLIS--ADQMQDEKTGQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTGERSLLN 428

Query: 425 EIIHPITD 432
            +  P+ D
Sbjct: 429 YLFKPLLD 436


>gi|296389724|ref|ZP_06879199.1| putative secretion protein [Pseudomonas aeruginosa PAb1]
          Length = 395

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/276 (21%), Positives = 121/276 (43%), Gaps = 39/276 (14%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNL-FEKNAVSQNDLNQQERIVYKS--------TLELREN 233
           N++S+LRA ++    ++   K++ F  +   +  L + ER ++KS        T  ++  
Sbjct: 110 NQASVLRAAIARLDAEVLGRKSIEFPPDVDPEGPLARSERELFKSRRDKLVEGTQAIQRQ 169

Query: 234 IHEQKNMLRHINELYDE------ANLEFANYLKEISRDLEQNQRTF--------ADEMSK 279
           IH  ++ L  +  L  +        L+ +  +  +S  L + + T+        A   + 
Sbjct: 170 IHLAQSQLDLVRPLVAKRAVSQMEALKLSQDIATLSGKLTELKSTYFQDAYTERAQRKAD 229

Query: 280 LTILEKTREQKT-------ILSPIAG---TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           L+ LE   +Q+        ILSP+ G   T++ N   +     Q  +P+M+++P  +   
Sbjct: 230 LSALEPIVQQRQDQLRRTEILSPVRGRVNTVLIN---TRGGVIQPGEPIMEVIPVEERLL 286

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + AK+ P+ +  +  G  A V+   Y        K  +E+I     +++     + YY+V
Sbjct: 287 VEAKIKPRDVAFLVPGMPAKVKITAYDYTIYGDLKGTLEQISADTIEEETPHGKESYYQV 346

Query: 390 ILKI--TDLAFSDNNIELRNGFPAEV-LFTAKNTTL 422
           ++K   + L   +  + +  G  AEV + + K + L
Sbjct: 347 LIKTDGSQLKRGEEVLPIIPGMVAEVDILSGKRSVL 382


>gi|238899013|ref|YP_002924695.1| putative type I transport system, membrane permease HylD family
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229466773|gb|ACQ68547.1| putative type I transport system, membrane permease HylD family
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 424

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 10/182 (5%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLM- 319
           +SR L ++Q+      + L I E+  E++ + +P+ G I   N+S S+     Q+  L+ 
Sbjct: 236 LSRQLSKDQQELNLMSTPLKIFEQQIEEENVRAPVNGVIYKINKSASTQGGVIQAADLLF 295

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +I P         KV PK    +  G  A V        + K ++A IEKI P   +++ 
Sbjct: 296 EIKPSVNTMQAEIKVNPKYRDQLYVGEQALVDILSLVKAKGKFYQASIEKISPDSYEENT 355

Query: 380 NLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
           N   Q YY+VI     ++F+  N +   L+ G   +        ++   +I P+T     
Sbjct: 356 NGSVQRYYKVI-----ISFNVKNEDMDWLKPGMAVDARVVTGKHSIMSYLISPLTKGISH 410

Query: 437 IF 438
           +F
Sbjct: 411 VF 412


>gi|260220505|emb|CBA28109.1| hypothetical protein Csp_A05640 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 389

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 71/381 (18%), Positives = 155/381 (40%), Gaps = 72/381 (18%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           +IG++  + W+    I+  V + G+++ +D    I+    G+++  +V  G  + +G  L
Sbjct: 22  LIGVVSFVVWANYFHIDQLVRAQGQVIVKDRTQVIQVADGGVLRDLRVSEGEIVHKGQVL 81

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL-- 142
              E                + R H     +  D + N+   L  +    + +  D L  
Sbjct: 82  AMLE----------------SERAH-----AGADEVENRLAGLSISKARADAEASDALPA 120

Query: 143 -GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR--ALLSSHQK-- 197
            GKY  T   +               +   R +Y     L+N++++ +  + L+ H K  
Sbjct: 121 WGKYQKTHPHL---------------VAVQRELY-----LQNRAAVAKEVSALTEHHKLA 160

Query: 198 --DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +  + + LF+   +S+ +L + +R+  ++         EQK     IN ++D+     
Sbjct: 161 LEEYQVNERLFQSGDISRVELMRAKRMTIEA---------EQK-----INAIWDK----- 201

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y  +  R++ + Q     + S+L   +   +  T+ SP+ G +   +  +     +Q 
Sbjct: 202 --YRTDARREIAKIQEEITSQQSRLQERQSVLDHTTLESPVDGIVKSLRISTLGGVLRQG 259

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-II 374
             LM+I P +    + AKV+P  I  ++ G    ++F  +       +K  +  I P  +
Sbjct: 260 DELMQISPTNSQILVEAKVSPADIGLIELGQPVILKFDAFDYSIYGSWKGELTYISPDTL 319

Query: 375 SQQDNNLQTQEYYEVILKITD 395
           ++Q  + +   +Y V + I +
Sbjct: 320 TEQGPDGRPNTFYRVQVNIAE 340


>gi|116694642|ref|YP_728853.1| RTX toxin membrane fusion protein [Ralstonia eutropha H16]
 gi|113529141|emb|CAJ95488.1| RTX toxin membrane fusion protein [Ralstonia eutropha H16]
          Length = 462

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 74/367 (20%), Positives = 147/367 (40%), Gaps = 34/367 (9%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E++V   G+++    V  +++   GII +  V  G  + +  PL+  +D   T      +
Sbjct: 70  EVAVGE-GKVIPSSQVQVVQNLEGGIIAEIMVRPGQVVNKDQPLMRIDDTRFTASYQEGR 128

Query: 101 VSIKNLRCHI---DTEKSALDFLNNK-YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
                L   I     E     F+ +   D   + F S E  L +       +  + F+  
Sbjct: 129 TRDDALVARIARLSAEADGTAFVASAPADAEGRRFVSEERALFE-------SRKRAFDAN 181

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQ 213
           ++ + +  + +          R +L  K S  + L  SH+   ++L MM+ +  +  VS+
Sbjct: 182 LAVLRQQSEQR----------RQELTEKRSREQQLRQSHRLVAQELAMMRPMMAQGVVSE 231

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE----ANLEFANYLKEISRDLEQN 269
            DL + ER       +L+  +   +  +  +   Y E    A+    +Y  E  ++L Q 
Sbjct: 232 VDLLRLER----QANDLKGELEAARLAMPRLEAAYRESQQKADELGTHYRAEAMKELNQA 287

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   A + +  T L+   ++  + +P+AG I   +  +     Q    L++IVP      
Sbjct: 288 KAEQAAQSATNTALQDRVDRTLVRAPLAGVIKQIKINTVGGVVQPGMDLLEIVPLEDTLL 347

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYE 388
           + A+V P  I  ++ G  A V+   Y       F   +E I    ++ +    + + YY 
Sbjct: 348 VEARVRPADIAFLRPGQPAVVKLSAYDFSIYGGFAGTVEHISADTLTPERPGERPESYYL 407

Query: 389 VILKITD 395
           V ++  D
Sbjct: 408 VRVRTRD 414


>gi|283852044|ref|ZP_06369319.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio sp. FW1012B]
 gi|283572594|gb|EFC20579.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio sp. FW1012B]
          Length = 461

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/321 (20%), Positives = 143/321 (44%), Gaps = 27/321 (8%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K+  P S++      +  +I  + WSI+  +++ V++ G +++    V I+   + IIKK
Sbjct: 40  KQPLPTSVRLTYYFLLALVIAALVWSIVAKMDMIVTARGRLISTGKQVVIQPLINSIIKK 99

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
           F VE G  + +G PL++ +   T  + D  +V  +     +  ++   +     + V   
Sbjct: 100 FHVEVGQVVKKGQPLVSLD--PTFAMADEAQVQTRLASLSVQLKRMEAELAGKPFQVTSD 157

Query: 130 AFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
             +  E  L    + G+ +   +K+ NY           +L + +  Y +    + +   
Sbjct: 158 -MDPSEAALQSNLYRGRQNEYHAKLENY---------DSRLAQAKGEYES---FKKRLES 204

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENI-HEQKNMLRHIN 245
           LR  L S  + L M + +F + A S+ + L+ Q R  + ST    E I ++ K   + I 
Sbjct: 205 LREQLQSADEVLKMRQKVFSQGADSRLSVLDAQAR--FSSTQAEAEGISNDMKVRQQQIA 262

Query: 246 ELYDEANLEFANYLKEISRDLEQNQR---TFADEMSKLTILEKTREQKTILSPIAGTIVY 302
           +   E     +N+  +I+ +L   ++   T  ++ +K     + RE   + SP    ++ 
Sbjct: 263 QSQAEREAFISNWRNDIANNLATARKERDTLVEQNAKAI---RYRELAELASPFDAVVLE 319

Query: 303 NQSFSSSNYAQQSQPLMKIVP 323
             ++S  + A++ + +M +VP
Sbjct: 320 LGNYSVGSVAKEGEAIMTLVP 340


>gi|59714351|ref|YP_207126.1| putative RTX transport membrane fusion protein RtxD [Vibrio
           fischeri ES114]
 gi|59482599|gb|AAW88238.1| putative RTX transport membrane fusion protein RtxD [Vibrio
           fischeri ES114]
          Length = 463

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 175/407 (42%), Gaps = 62/407 (15%)

Query: 12  NHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           N P + K + L  I+   G+ I W+    I+      G+++    +  +++   G++K+ 
Sbjct: 27  NTPTNAK-ILLWVIVVFFGIAIGWASWAEIDKVTVGQGKVIPSSQLQVVQNLEGGLVKEM 85

Query: 71  QVENGSQILQGTPLLTFEDIE-TTDLIDLKK------VSIKNLRCHIDT----------- 112
            V+ G Q+ +G  LL  +D    +D  + KK       S + L   +D+           
Sbjct: 86  LVKEGDQVEKGQQLLLIDDTRFRSDFRERKKQLINLTASAQQLAASMDSILIQDINNRKR 145

Query: 113 -EKSALDFLNN-KYD---VLEKAFESREEQLLDFLGKYHSTCSK--VFNYGISSVYRSLK 165
            ++S + + +  K+D   V E    +R  QL ++    ++  ++  VF+  +S   + L 
Sbjct: 146 WKESVIVYTDKLKFDEAFVKENPIVTR-RQLAEYKADMNNLKNRIFVFDQQVSQKQQDLV 204

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               R+R+              L+A  +  +K+L + K L ++  V + +L + +R V  
Sbjct: 205 EIKARVRN--------------LKASYNLARKELDITKPLADEGVVPRIELLKLQRQVND 250

Query: 226 STLELRENIHEQKNMLRHINELY---DEANLEFANYLKEISRDLEQNQR--TFADEMSKL 280
           +  EL     +   +   I E      +A L+F +         EQ ++  T  D++S L
Sbjct: 251 TKRELTSTELKIPVLTSAIQETVLNRIDAALKFRS---------EQQEKLNTTQDKLSAL 301

Query: 281 T---ILEKTREQKT-ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
           T   +  K R  +T +LSP+ GTI      +     Q    L++IVP      I AK+ P
Sbjct: 302 TESQVGLKDRVNRTVVLSPVTGTIKKIYINTVGGVIQPGMDLIEIVPTEDTLLIEAKIAP 361

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNL 381
           + I  ++ G +A V+F  Y   R    K  +E I  D I  ++ N+ 
Sbjct: 362 QDIAFLRPGLSAIVKFSAYDFTRYGGLKGTLEHISADTIQDEEGNSF 408


>gi|253568628|ref|ZP_04846039.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251842701|gb|EES70781.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 304

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 28/197 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R DL  + +  +  +++ Q++   ++NL    A +Q  L+  +  V   TL  
Sbjct: 84  MKSVESQRPDLAKQIAATKQQITTAQREKKRVENLLAAGAANQKQLDDWDAQV---TLLQ 140

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R+ I ++ ++++  N L ++ N          S  ++  Q    D++SK           
Sbjct: 141 RQLIAQESSLMKSTNSLTEQGN----------SVGIQVAQ--VEDQLSKC---------- 178

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I SPI GT++   +  +   A   +PL K+    ++ Y+RA VT +Q+  VK G   TV
Sbjct: 179 HIQSPIEGTVLVKYA-EAGELASVGKPLFKVGEVDRM-YLRAYVTSEQLSQVKLGDEVTV 236

Query: 351 RFPHYADIREKKFKAII 367
            +  Y +  +K +  ++
Sbjct: 237 -YSDYGNSEQKAYPGVV 252


>gi|189184014|ref|YP_001937799.1| alkaline protease secretion protein AprE [Orientia tsutsugamushi
           str. Ikeda]
 gi|189180785|dbj|BAG40565.1| alkaline protease secretion protein AprE [Orientia tsutsugamushi
           str. Ikeda]
          Length = 512

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 105/448 (23%), Positives = 188/448 (41%), Gaps = 69/448 (15%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M +  ++G  GL  WS L P++ +  + G +++      I+    GI+K+  V+ G  + 
Sbjct: 102 MIIFIVVG--GL--WSALAPLDSAAVAVGTVISSTENKIIQHQEGGIVKEIFVKQGDYVK 157

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P++  +D +    +++K    + L             L N+   L    E +EE + 
Sbjct: 158 TGDPIIALDDTKIRASVEIKLGQYRTL-------------LANQAR-LTAELEQQEEIIF 203

Query: 140 -DFLGKYHSTCSKVFNYGISSVYR--SLKMKLTRMRSIYLNR--LDLENKSSLLRALLSS 194
            +FL         V N  I  V +  S++  L + R   LN   +  E +   L A + +
Sbjct: 204 SEFL---------VNNNHIPEVAKIMSIQQHLFQARKKGLNARIMQFEKRIDSLEAKVVA 254

Query: 195 HQKDLTMMKNLFEKNA---VSQNDLNQQE---RIVYKSTL-------ELRENIHEQKNML 241
            +K L  ++ L  KNA   ++Q    + E    +V +S+L       EL  N   Q+++ 
Sbjct: 255 SKKQLEYVRKLI-KNAESLIAQGFGQKTELDKLLVEESSLVGNIIITELEIN-STQQDIE 312

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R  +E  D    E    LKE+   + + Q ++    S + IL +T     + SP+ G I 
Sbjct: 313 RTKSEAIDRTLSE----LKEVEHAVIEAQESYN---SLIDILSRT----LVKSPVDGIIK 361

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +        Q + +I P +    I+AK+  K I  VK G  A +RF  +      
Sbjct: 362 VLDVNTQGGVIGSGQRIAEITPSNDSLIIKAKIPQKNIDSVKVGLKAKIRFGAFKYRTTP 421

Query: 362 KF--KAIIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSD----NNIELRNGFP 410
            F  + ++   D +  QQ     +N +    +Y   ++I    F+      N++L  G  
Sbjct: 422 VFTGRVVLVSPDTVQDQQSAMQFNNAMIGDTFYIAKIEIDMDEFNKVAKVKNLKLFPGMQ 481

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           A++       TL + ++ PITDN  + F
Sbjct: 482 ADIQIITGTRTLLRYLLDPITDNMFRAF 509


>gi|119485674|ref|ZP_01619949.1| HlyD family secretion protein [Lyngbya sp. PCC 8106]
 gi|119456999|gb|EAW38126.1| HlyD family secretion protein [Lyngbya sp. PCC 8106]
          Length = 651

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 24/181 (13%)

Query: 14  PASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           PA    M L  I+ +    I W+    IE +V + GE+   D   EI++P +G + +  V
Sbjct: 17  PAFWSHMFLWVIMLVSTSAIVWAYFARIEQTVPAVGELEFSDGAREIQAPTTGAVVRLHV 76

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE---------KSALDFLNNK 123
           ENG ++++  PLLTF    T    DLK  S++ +R  ++ E               L+  
Sbjct: 77  ENGDRVVKNQPLLTFSP--TNPSADLK--SLEQVRETLERENQFYEGVVRGQGSGQLSAG 132

Query: 124 YDVLEKAFESR--EEQLLDFLGKYHSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRL 179
            D L    E+R  E Q L       S   +++N   GI S   SL   ++  R+ Y++R+
Sbjct: 133 LDTLITEREARIGENQAL------QSLLDELYNGRGGIGSYNPSLSGLVSNYRAEYISRI 186

Query: 180 D 180
           +
Sbjct: 187 N 187


>gi|188579546|ref|YP_001922991.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium populi BJ001]
 gi|179343044|gb|ACB78456.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium populi BJ001]
          Length = 457

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 80/434 (18%), Positives = 188/434 (43%), Gaps = 41/434 (9%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +++  G+ G   W+  + ++ +V S+G I+ E +   ++    G+++   V +G  +  G
Sbjct: 45  IVAAFGVAG--AWAATVRLDRAVISTGVIVAESSRKVVQHFEGGMVQAVLVRDGQTVRAG 102

Query: 82  TPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             LL  + +++    DL +  +     L   +  E++  D L    D+  +  E    ++
Sbjct: 103 DVLLRIDPVQSQASADLFRNQLDAALVLEARLRAEQAQSDDLQLPADLAARRDEPAVARM 162

Query: 139 L-DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS----IYLNRLDLENKSSLLRALLS 193
           + D  G+     +      +      ++ K+T++R+    + + +  +E +   +R    
Sbjct: 163 ISDQAGQLVERRTT-----LKGQLALIEAKVTQLRTEISGLAVEKSSVEQQVGFIR---- 213

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYDEA 251
              ++L  +++L E+N +  + L   ER   ++ LE  +  ++ E+      I+E    A
Sbjct: 214 ---QELEGLRSLHERNLIPLSRLLVMER--ERTRLEGVIGRSVAERAKAENAISE----A 264

Query: 252 NLEFANY---LKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            L+       L+E ++  L + ++   +   KL + +    +  I +   G I   +  +
Sbjct: 265 GLQITQLKQKLQETVTGQLLETRQRIGELREKLVVAQDVFRRHEIRASHDGVIQALKVVA 324

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                +  +PLM+IVP +    +  + +P  ++ V  G  A ++FP +   + ++  A+ 
Sbjct: 325 IGQVVRSGEPLMEIVPTADRLVVNVQFSPNDLEAVHAGMRAEIKFPTF---QARRTPAVF 381

Query: 368 EKIDPIISQQD--NNLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQ 424
             +  ++S+    +    Q Y+   ++I +    +D    L  G PAEV+ +A   T  +
Sbjct: 382 GTLT-VVSRDRLVDEGTKQAYFAGTVEIDEHHLPADVRHRLLAGLPAEVVVSAGERTALE 440

Query: 425 EIIHPITDNWPKIF 438
            +  P  D   + F
Sbjct: 441 YLFAPFFDAMGRAF 454


>gi|170740742|ref|YP_001769397.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium sp. 4-46]
 gi|168195016|gb|ACA16963.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium sp. 4-46]
          Length = 420

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 79/424 (18%), Positives = 169/424 (39%), Gaps = 33/424 (7%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF- 87
           +GL  W+    +  +V + G ++ E NV +++    G++ + +V +G+++  G  L+   
Sbjct: 13  LGLGGWAATTELAGAVIAPGALVVETNVKKVQHLTGGVVGELRVRDGAEVRAGEVLVRLD 72

Query: 88  EDIETTDLIDLKKVS--IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           E I   +L  + K        +  +  E+   D +    D++++  E     + D LG+ 
Sbjct: 73  ETITRANLAVITKSQDEFTARQARLKAEQDGRDGVRFPADLVQRRAEP---AVTDLLGEE 129

Query: 146 HS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMM 202
                  +    G  +    L+ ++ ++R       D +  K   +R +     ++L  +
Sbjct: 130 ERLFAIRRTAREGQKA---QLRERIGQLREQIQGMADQVTAKQREIRLI----GEELKGV 182

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN------LEFA 256
           + LF KN +    +   ER   +  LE      E+  ++  I +   +        L+  
Sbjct: 183 RELFAKNLIQITRVTALERDAAR--LE-----GERGALVSAIAQTKGKVTETELQILQVD 235

Query: 257 NYLK-EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             L+ E+ ++L + +   A+ + K    E   ++  I +P  G +      +        
Sbjct: 236 QDLRTEVGKELAEIRGKLAELVEKRVAAEDQLKRVEIRAPQDGVVHQLAVHTVGGVVSPG 295

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           +PLM IVP S    + A++ P+ I  V+ G+ A +RF  +      + K  +  +   IS
Sbjct: 296 EPLMLIVPRSDALTVEARIQPQDIDQVRLGHRAVLRFSAFNQRTTPELKGEVIVVSADIS 355

Query: 376 QQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
           Q      +  +Y V ++         + ++L  G P E         +   +  P+ D  
Sbjct: 356 QDQKTGAS--FYTVRIRPAAGELERLDGLKLVAGMPVESFIQTGERMVLSYLTKPLHDQI 413

Query: 435 PKIF 438
            K +
Sbjct: 414 TKAW 417


>gi|254283548|ref|ZP_04958516.1| HlyD family secretion protein [gamma proteobacterium NOR51-B]
 gi|219679751|gb|EED36100.1| HlyD family secretion protein [gamma proteobacterium NOR51-B]
          Length = 494

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 83/443 (18%), Positives = 179/443 (40%), Gaps = 50/443 (11%)

Query: 2   HHFMWKNLK-----RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV 56
            H  W +L         P   +R+  +  + ++ L+ W+    I+      G+++    V
Sbjct: 64  RHLGWDDLADQASIEQEPMRARRLLYVVGLVVVALLLWAGFAEIDTVTRGQGKVIPSRQV 123

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I S   G++++  V  G  + +G  LL  +   +   +   +  ++ L     T K+A
Sbjct: 124 QVIGSQDGGVVREILVSEGDIVREGDLLLRLDQTRSQSSLGENRAELQAL-----TVKAA 178

Query: 117 -LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            L  L N        FE   E + +          +++  G+  +    ++   ++    
Sbjct: 179 RLKALVNG-----TTFEYTPEMIAEVPDVVDQEL-QLYASGLEQLEVEQQIAEQQLTQRL 232

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
               +LE +   L   L    ++L++ + +    AV+Q ++ + +R V K+T EL +   
Sbjct: 233 EELTELEAREGQLSRELGLAAQELSVTRPMVASGAVAQVEILRLQREVNKATGELDQTRA 292

Query: 236 EQKNMLRHINEL---YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE---- 288
           + + +   + E     +E  LEFAN  +E             + +S++  L +  E    
Sbjct: 293 QLRRIQAAVAEARSNIEEVRLEFANEARE----------QLTETISRINGLREAAEGLTD 342

Query: 289 ---QKTILSPIAGTI--VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
              Q  +++P+ GT+  +Y  +      A +   ++++VP      +   + P+ I  + 
Sbjct: 343 RVRQTNVVAPVTGTVKQLYYNTVGGVVLAGRD--IIELVPADDTLLLEVNIKPQDIAFLA 400

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
            G  A V+   Y  +     +  +E+I  D ++ ++ N      +YEV+++     F  +
Sbjct: 401 PGQIANVKVTAYDFVVYGGLEGRVEQIGADTVVDEEGNA-----FYEVLVRTEQADFGPD 455

Query: 402 NIELRNGFPAEV-LFTAKNTTLA 423
              +  G   EV + T K T L+
Sbjct: 456 K-PIIPGMTVEVDILTGKKTVLS 477


>gi|221640616|ref|YP_002526878.1| Type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sphaeroides KD131]
 gi|221161397|gb|ACM02377.1| Type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sphaeroides KD131]
          Length = 433

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 4/174 (2%)

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L E++  L    R      +++       E++T+ +P AG +V   + +          +
Sbjct: 251 LAEVAEQLAAAGRQLPGLEAQIRATRDVLERRTLRAPQAGLVVEVPTVTPGAVIGSGMAV 310

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M+IVP      I+ +V P+ I +V+KG  A VR   Y        +  +  + P + +  
Sbjct: 311 MEIVPDLDHLVIQMRVPPEAIDNVRKGGLARVRLTAYRRALAPVVRGQVSFVSPDLIEDP 370

Query: 379 NNLQTQEYYE--VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +  T  Y+E  V L    LA   + + L  G P EV  +         ++ PI
Sbjct: 371 RDGTT--YFEARVTLDPESLAEQPDWVRLSAGMPVEVSVSTGERRAGDYLLEPI 422


>gi|269960076|ref|ZP_06174453.1| secretion protein, HlyD family [Vibrio harveyi 1DA3]
 gi|269835375|gb|EEZ89457.1| secretion protein, HlyD family [Vibrio harveyi 1DA3]
          Length = 463

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 87/441 (19%), Positives = 184/441 (41%), Gaps = 36/441 (8%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P+S + M  + ++  +  I W+    I+      G+++    +  +++   G++K+  
Sbjct: 27  NTPSSARLMLWVMVLFFVAAIGWASWAQIDKVTVGQGKVIPSSQIQVVQNLEGGLVKEIL 86

Query: 72  VENGSQILQGTPLLTFEDIE-TTDLIDLKK------VSIKNLRCHIDTEKSALDFLNNKY 124
           V+ G Q+ +G  LL  +D    +D  + ++       S+  L   I + +   +F N+ +
Sbjct: 87  VKEGQQVEKGQQLLLIDDTRFRSDFREREQQVANLTASVLQLSASISSVEVNREFDNSNW 146

Query: 125 D---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           +   VL+    +    L +   +        +   + ++   + +   +++    + +++
Sbjct: 147 EQNVVLDYGKLTFPPTLEENQPRLTQRQKAEYREDLDNLRSQISVIDQQVKQKQQDLVEI 206

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-------QNDLNQQERIVYKSTLE---LR 231
           + + S LR      +K+L + K L ++  V        Q  +N   R +  S L+   L+
Sbjct: 207 QARVSNLRQSYRYAKKELDITKPLADEGVVPRIELLKLQRQVNDTRREMTSSELKIPVLK 266

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             I E  +ML  I+     A L+F +  +E    L   Q   +  +     LE    +  
Sbjct: 267 SAIRE--SMLNRID-----AALKFRSEQQE---KLNSTQDQLSSLVESAVGLEDRVNRTV 316

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           ++SP+ GTI      +     Q    +++IVP      + AK+ PK I  ++    A V+
Sbjct: 317 VVSPVTGTIKTLNVNTVGGVIQPGMDIVEIVPTEDTLLVEAKIAPKDIAFLRPDLHAIVK 376

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFP 410
           F  Y   +    +  +E I    +Q +   +   +Y V ++     F  D ++ +  G  
Sbjct: 377 FTAYDFTKYGGLEGELEHISADTTQDE---EGNSFYIVRVRTDKTNFGQDADLPIIPGMT 433

Query: 411 AEV-LFTAKNTTLAQEIIHPI 430
           A V + T K T L + ++ PI
Sbjct: 434 ASVDIITGKRTVL-EYLLKPI 453


>gi|254469310|ref|ZP_05082715.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
 gi|211961145|gb|EEA96340.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
          Length = 451

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 92/423 (21%), Positives = 174/423 (41%), Gaps = 48/423 (11%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           +  + W+    +E      G I+    +  I+S   GI+K+  V+ G  + +G  L+  +
Sbjct: 45  VAFVVWASWAQLEEVTRGDGRIIPSAKIQVIQSLEGGIVKEVLVKTGDLVSKGDVLIRLD 104

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D   +   +L ++  K L   I  E+  L+F        +  +  R E+L  +   Y   
Sbjct: 105 DTGFSS--NLGELVAKQLALEIARER--LEF--------QSVWPQRGEEL-SYTDHYQEK 151

Query: 149 CSKVFNYGIS---SVYRSLKMKLTRMRSIYLNRLD----LENKSSLLRALLSSHQKDLTM 201
             ++    +S   +    LK ++   RS    R+      EN+   L  LL    ++  +
Sbjct: 152 APQIVASELSLFQANVEGLKGQVAINRSRVAQRMAELEASENQKRKLMELLRLANEEREL 211

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN-YLK 260
              L EK  + + D+ + +R +     +L   I+  +     +    DEA  E  + Y+K
Sbjct: 212 KAPLAEKQIIPRTDMLKLQREIG----DLEGQINTLQVTEGRLQAAVDEAEQEIESLYIK 267

Query: 261 EISRDLEQNQRTFADEM-SKLTILEKTRE-------QKTILSPIAGTIVYNQSFSSSNYA 312
                  Q  R    E+ ++L I+ +T +       +  I +P+ G +      +    A
Sbjct: 268 -----FRQAARAEMSEVQAQLDIISETSKGAGDKVKRAEIRAPMDGIVNTIDVSTIGGVA 322

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-- 370
             SQ LM IVP   +  + AKV P+ I  + +G  A V+   Y           +E I  
Sbjct: 323 SPSQQLMTIVPVEDILLVEAKVKPQDIAFIHQGQQALVKLSAYDFSIYGGLDGEVEGISA 382

Query: 371 DPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEV-LFTAKNTTLAQEII 427
           D +     + +  +++Y VI+K   T+L   + ++ +  G  A V + T + + LA  I+
Sbjct: 383 DTVY----DEVTHEQFYSVIIKTKQTELESRNKSLPILPGMVASVDILTGEKSVLAY-IL 437

Query: 428 HPI 430
            P+
Sbjct: 438 KPV 440


>gi|229591409|ref|YP_002873528.1| putative periplasmic protein [Pseudomonas fluorescens SBW25]
 gi|229363275|emb|CAY50377.1| putative periplasmic protein [Pseudomonas fluorescens SBW25]
          Length = 389

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 18/161 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLP--------------IEISVSSSGEILNED 54
           +KR  PA    + +  +I II +  W +L P              IE SV++ G  L   
Sbjct: 1   MKRPRPARRALLAIACLIPIIAVAAWQVLPPGRDALTTVAVTRGNIENSVTALG-TLQPR 59

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V++ +  SG I+K  VE G  + +G  L+  +       +D  + +I+NL+  +  +K
Sbjct: 60  RYVDVGAQASGQIRKIHVEAGDHVQEGQLLVEIDPSTQKAKLDASRYAIENLKAQLQEQK 119

Query: 115 SALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +  +    KY     L     +REE +     +  +T ++V
Sbjct: 120 AQHELARQKYQRQQRLAAGNATREEDVQTAKAELSATQARV 160


>gi|315181671|gb|ADT88584.1| secretion protein, HlyD family [Vibrio furnissii NCTC 11218]
          Length = 463

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 85/434 (19%), Positives = 179/434 (41%), Gaps = 37/434 (8%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P+S + M  + ++  I    W+    I+      G+++    +  +++   G++K+  
Sbjct: 27  NTPSSARIMLWVMVLFFILAGAWASWAQIDKVTVGQGKVVPSSQIQVVQNLEGGLVKQIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD--FLNNKY----- 124
           V  G Q+ +G  LL  +D         ++  + NL  ++    +++    +N+++     
Sbjct: 87  VREGEQVKKGQQLLLIDDTRFRSDYREREQQVANLTANVLQLSASIASVVVNDEFTEAEW 146

Query: 125 ------DVLEKAF-----ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                 D  + AF     ES+ + +     +Y      + N  +S + + +K K   +  
Sbjct: 147 EKSVRIDYTKLAFPPALLESQPDLVERQRAQYRQDLDNLRNQ-LSVISQQVKQKQQDL-- 203

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                ++++ +   LR   S   K+L + K L ++  V + +L + +R V  +  +L  +
Sbjct: 204 -----VEIQARVRNLRQSYSYANKELEITKPLADEGVVPRIELLKLQRQVNDTRRDLTSS 258

Query: 234 ---IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +   K+ LR       +A L+F +  +E    L Q Q   +        LE    + 
Sbjct: 259 ELKVPVLKSALRESMLSRIDAALKFRSQQQEA---LNQTQDKLSAMTESTVGLEDRVNRT 315

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            +LSP+ GTI      +     Q    +++IVP      + A++ P+ I  ++    A V
Sbjct: 316 VVLSPVTGTIKTLYVNTVGGVIQPGMDIVEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIV 375

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGF 409
           +F  Y   +    +  +E I    SQ ++      +Y V ++  + +   D ++ +  G 
Sbjct: 376 KFSAYDFTKYGGLEGTLEHISADTSQDEDG---NSFYLVRVRTKETSLGHDESLPIIPGM 432

Query: 410 PAEV-LFTAKNTTL 422
            A V + T K T L
Sbjct: 433 TASVDIITGKRTVL 446


>gi|66046389|ref|YP_236230.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae B728a]
 gi|63257096|gb|AAY38192.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae B728a]
 gi|330954602|gb|EGH54862.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae Cit 7]
 gi|330972869|gb|EGH72935.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 445

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 79/428 (18%), Positives = 159/428 (37%), Gaps = 35/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G      W+ L P++  ++  G ++       ++S   G++ K  V  G  + +G
Sbjct: 27  ILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQLVKEG 86

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLD 140
            PL   +  +        +  +++LR       ++L    ++ D L++  F +  E +  
Sbjct: 87  EPLFRLDQTQV-------EADVQSLRAQYRMAWASLARWQSERDNLDEVRFPA--ELIAA 137

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALL 192
             G+       +   G   ++ S +  L R +S          L    +    S L A  
Sbjct: 138 GQGQDPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQA 197

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S +K L+ ++ L +   +  N L + +R + +    L +N  E   + + I E      
Sbjct: 198 DSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQGIVESRLRLQ 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQS 305
            +   Y KE+       +  +AD   K   LE+       + +   IL+P  G  V    
Sbjct: 258 QQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNLGV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + L++IVP      +  ++  + I  V       + F  +   R  +   
Sbjct: 311 HTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVSG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     Q  +    Q YY +   + D A    N + ++ G PAE+       +L  
Sbjct: 371 EVSLIS--ADQMQDEKTGQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTGERSLLN 428

Query: 425 EIIHPITD 432
            +  P+ D
Sbjct: 429 YLFKPLLD 436


>gi|259417584|ref|ZP_05741503.1| type I secretion membrane fusion protein, HlyD [Silicibacter sp.
           TrichCH4B]
 gi|259346490|gb|EEW58304.1| type I secretion membrane fusion protein, HlyD [Silicibacter sp.
           TrichCH4B]
          Length = 390

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 72/403 (17%), Positives = 155/403 (38%), Gaps = 59/403 (14%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           TW+    ++  V + G++++      +++   GI+ +  V  G  +  G  L   +D + 
Sbjct: 32  TWAGFASVDEIVRADGQVVSSSRSQIVQNLEGGILAELYVRQGDTVQAGQILAKLQDTK- 90

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                         R   D  +  +D L  K   LE   E          G Y       
Sbjct: 91  -------------FRAASDDLQDQIDGLEIKQYRLEAEIE----------GAYEFAVPDA 127

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                  +  S +  L   +S Y +R +  +   +LR L    + +L+ +K+L E+  V+
Sbjct: 128 LASRSPDILASERALLKARQSDYDSRRN--SAEDILRQL----KNELSNLKSLHEQKIVA 181

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQN 269
             ++N+ ++ V  +  +               +E+  +A L  A    E  R    L Q 
Sbjct: 182 LLEVNEAKKKVSDAQAKF--------------DEIGTQAELTLAEEYSETLRLLTSLRQE 227

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           QR   D++++            I SP+AG +      +     +    +++I+P  +  +
Sbjct: 228 QRLARDQLNR----------TVITSPMAGIVNSLAVTTIGGVVRPGDEILEIIPLGEELF 277

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A+V P+ I +V++G   T++   Y        +  ++ +     + + + +   +Y V
Sbjct: 278 VEARVKPENIANVQRGQDVTIKLSAYDYTIYGSLRGKVDVVSADTFEDERDPRAAPFYRV 337

Query: 390 ILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +++  + L      IE+R G  A       + T+   ++ P+
Sbjct: 338 TVRVDRSSLTARQQQIEIRPGMRATAELQTGSKTILTYLLKPL 380


>gi|307947327|ref|ZP_07662661.1| HlyD family type I secretion membrane fusion protein [Roseibium sp.
           TrichSKD4]
 gi|307769469|gb|EFO28696.1| HlyD family type I secretion membrane fusion protein [Roseibium sp.
           TrichSKD4]
          Length = 436

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 114/279 (40%), Gaps = 36/279 (12%)

Query: 181 LENKSSLLRALLSSHQ-------KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
            +N+ S + AL SS +       ++LT ++ L +K  + ++ L   ER         RE+
Sbjct: 170 FQNQISGIEALKSSKKTQLGFLDEELTSVRTLNKKGLMPKSQLMALER--------QRED 221

Query: 234 I----HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTRE 288
           I     EQ   L  I     E  ++     +E  + +    R    E++ +T  L+ T E
Sbjct: 222 IIGQVAEQDAELARIQNAISETEIQILQIDREFRQTVLTELRQVEAEVNDMTQQLQATLE 281

Query: 289 QKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           Q     I +P++G I     F+         P+++I+P   +  I A V P+ +  +  G
Sbjct: 282 QLNRVEIKAPVSGIIHELSVFTIGGVIGPGDPVLQIIPQDGVFEIEADVEPQFVDELYPG 341

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE- 404
             AT+RF  +      +    ++ + P +   +    T  +Y+V      +A  D+ +E 
Sbjct: 342 QPATLRFSAFNQRTTPELNGFVKTVSPNVVVDEQTGMT--FYKV-----RMAIPDDQLER 394

Query: 405 -----LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                L +G P E     K+ T    +  P+ D   + F
Sbjct: 395 LKGQKLISGMPVEAFIKTKDRTALNYLTKPLMDQINRAF 433


>gi|126463542|ref|YP_001044656.1| HlyD family type I secretion membrane fusion protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126105206|gb|ABN77884.1| type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 433

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 4/174 (2%)

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L E++  L    R      +++       E++T+ +P AG +V   + +          +
Sbjct: 251 LAEVAEQLAAAGRQLPGLEAQIRATRDVLERRTLRAPQAGLVVEVPTVTPGAVIGSGTAV 310

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M+IVP      I+ +V P+ I +V+KG  A VR   Y        +  +  + P + +  
Sbjct: 311 MEIVPDLDHLVIQMRVPPEAIDNVRKGGLARVRLTAYRRALAPVVRGQVSFVSPDLIEDP 370

Query: 379 NNLQTQEYYE--VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +  T  Y+E  V L    LA   + + L  G P EV  +         ++ PI
Sbjct: 371 RDGTT--YFEARVTLDPESLAEQPDWVRLSAGMPVEVSVSTGERRAGDYLLEPI 422


>gi|332994176|gb|AEF04231.1| HlyD family secretion protein [Alteromonas sp. SN2]
          Length = 454

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 99/435 (22%), Positives = 183/435 (42%), Gaps = 50/435 (11%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLI--TWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           W  + +  PA  KR  LL  +G++ LI   W+    I+      G+++    +  ++S  
Sbjct: 34  WARIMQT-PAKAKR--LLYSVGVVLLILLIWAYFAEIDEVAKGEGKVIPSQQLQILQSYD 90

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLID-----LKKVSIKNLRCHIDTEKSALD 118
            GI++   V  G Q+ +G  LL  +       ++        ++ K  R    T  ++L 
Sbjct: 91  GGIVQDILVSEGQQVQKGDVLLRVDPTRYISSLEENTTQFAALAAKVQRLSALTNNTSLA 150

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           F  +  +   K  E+ E  L      + S  +++      S  R           I    
Sbjct: 151 FSPDLINQAPKIVEN-ERNL------FESNLAELNEVAAGSDSR-----------IQQRN 192

Query: 179 LDLENKSSLL---RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
            D+E + + L   +++LS  +K+L++ K L    AVS+ ++ + ER +    +EL   I 
Sbjct: 193 QDVEQERANLYQYKSVLSLTEKELSVTKPLLASGAVSEIEILRLERQI----VELEGKIA 248

Query: 236 -EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL----TILEKTREQK 290
             Q  + R ++ + +E   +  + LK I+R   Q       EM+ L    T LE    Q 
Sbjct: 249 MSQVAIERGLSTIEEEIISKEESRLKLINR-WNQELTDAVGEMATLQQSQTTLEDVVSQA 307

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + SPI GT+      +          +++++P      + AKV+PK I  ++ G  A +
Sbjct: 308 ELRSPINGTVQRLLINTVGGVITPGSAVIELIPQDDQLIVEAKVSPKDIAFIRGGQKAIL 367

Query: 351 RFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           +F  Y         A ++ I  D I +++D     + Y+ V L+ T    +D  +++  G
Sbjct: 368 KFSAYDFTIYGGMDAEVKHISADAITNEKD-----ETYFLVRLE-TKRTIADAPLDIMPG 421

Query: 409 FPAEV-LFTAKNTTL 422
              +V + T K T L
Sbjct: 422 MIVQVDILTGKKTVL 436


>gi|77464702|ref|YP_354206.1| HlyD family protein secretion protein , membrane fusion protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|77389120|gb|ABA80305.1| protein secretion protein, HlyD family, membrane fusion protein
           [Rhodobacter sphaeroides 2.4.1]
          Length = 433

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 4/174 (2%)

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L E++  L    R      +++       E++T+ +P AG +V   + +          +
Sbjct: 251 LAEVAEQLAAAGRQLPGLEAQIRATRDVLERRTLRAPQAGLVVEVPTVTPGAVIGSGTAV 310

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M+IVP      I+ +V P+ I +V+KG  A VR   Y        +  +  + P + +  
Sbjct: 311 MEIVPDLDHLVIQMRVPPEAIDNVRKGGLARVRLTAYRRALAPVVRGQVSFVSPDLIEDP 370

Query: 379 NNLQTQEYYE--VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +  T  Y+E  V L    LA   + + L  G P EV  +         ++ PI
Sbjct: 371 RDGTT--YFEARVTLDPESLAEQPDWVRLSAGMPVEVSVSTGERRAGDYLLEPI 422


>gi|37524636|ref|NP_927980.1| hypothetical protein plu0635 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784061|emb|CAE12930.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 471

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 77/355 (21%), Positives = 154/355 (43%), Gaps = 36/355 (10%)

Query: 13  HPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           HPA   R+   +I+G   L + W+ +  IE+   + G+++       I+S  + +++   
Sbjct: 50  HPAP--RIFTWTILGFAVLALLWAYIGKIEVVAIAPGKVVPNGKTKLIQSSETAVVRAIH 107

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA--LDFLNNK---YDV 126
           V +G  +  G  L+  +   T    D+ ++  + L   ID+ +SA  LD +N +     +
Sbjct: 108 VNDGQSVKVGELLVELDP--TAASADVSRIQSELLAARIDSARSAAMLDAINQQKSPASL 165

Query: 127 LEKAFESREEQLLD----FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +     +  EQ+L       G+Y    S +       + RS +++              +
Sbjct: 166 VGTIDNANPEQVLSAQRWLQGQYQEYRSNLELVDAEILQRSAEIQ------------SAQ 213

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH-EQKNML 241
            + + LR  L    +     + L +K  VS+++  ++E    ++ L+L+  +  +Q ++L
Sbjct: 214 AQVASLRKTLPIATRLAEDYQRLLKKQYVSRHEYLEKE----QTRLDLQRQLSVQQASVL 269

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTREQKTILS---PIA 297
           +H     DEA       + +  R +   Q+    +++ L   L K R Q+T+ S   P+A
Sbjct: 270 QHAAA-QDEARRRREAVVAQNRRAMLDLQQEANKKVATLVQELAKARYQETLTSLKAPVA 328

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           GT+      +       +QPLM IVP  +   + A++  K +  V  G   TV+ 
Sbjct: 329 GTVQQLAIHTVGGVVTPAQPLMVIVPADQSVEVEARLENKDVGFVHVGQPVTVKV 383


>gi|117925264|ref|YP_865881.1| HlyD family type I secretion membrane fusion protein [Magnetococcus
           sp. MC-1]
 gi|117609020|gb|ABK44475.1| type I secretion membrane fusion protein, HlyD family
           [Magnetococcus sp. MC-1]
          Length = 468

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 80/373 (21%), Positives = 151/373 (40%), Gaps = 37/373 (9%)

Query: 14  PASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P+   R+   +I+    L + WSI   I++   + G+IL   +V  I+    G++++  V
Sbjct: 47  PSPFGRLITWTIMLFCALAVGWSIWGQIDVVAVAQGKILPNGHVKVIQPLEIGVVREIPV 106

Query: 73  ENGSQILQGTPLLTFEDIET-TDLI----DLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
             G Q+ +G  L+  +   T  DL+    +L    +   R     E    +     Y   
Sbjct: 107 REGEQVAEGEVLVILDPTSTEADLVRFEENLLSAQLDMARWQALAEWDQGEQPQILYRSP 166

Query: 128 EKAFESREEQ----LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           + A E R ++    L D L  + ++        +  +   LK ++  + S      +   
Sbjct: 167 DGAPEGRVQKQRWLLKDTLLAHRAS--------LQGIGHELKKQMAELASAK----EAVR 214

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ--QERIVYKSTLELRENIHEQKNML 241
           K   L  L++   K     K L EK   +Q+   +  QER+      EL+ ++  QK+ L
Sbjct: 215 KYQQLLPLIA---KRANAQKTLMEKKLAAQSHWLELEQERV------ELQRDLAIQKSRL 265

Query: 242 RHINELYDEANLEFA----NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +    D     FA     + KE+     ++++   D   +LT   +  + + + SPI 
Sbjct: 266 AELLAGLDVTRKRFAETEARFRKEVMEKYVESEQRVIDIEQELTKAARRNQLQVLRSPID 325

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +      +     Q +Q LM+IVP S    + A +  K I  V++G    ++   +  
Sbjct: 326 GVVQNLVIHTVGGVVQPAQELMRIVPTSGGIEVEAYLANKDIGFVEEGQAVEIKLETFPF 385

Query: 358 IREKKFKAIIEKI 370
            R      I++K+
Sbjct: 386 TRYGLINGIVKKL 398


>gi|332559595|ref|ZP_08413917.1| HlyD family type I secretion membrane fusion protein [Rhodobacter
           sphaeroides WS8N]
 gi|332277307|gb|EGJ22622.1| HlyD family type I secretion membrane fusion protein [Rhodobacter
           sphaeroides WS8N]
          Length = 433

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 4/174 (2%)

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L E++  L    R      +++       E++T+ +P AG +V   + +          +
Sbjct: 251 LAEVAEQLAAAGRQLPGLEAQIRATRDVLERRTLRAPQAGLVVEVPTVTPGAVIGSGTAV 310

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M+IVP      I+ +V P+ I +V+KG  A VR   Y        +  +  + P + +  
Sbjct: 311 MEIVPDLDHLVIQMRVPPEAIDNVRKGGLARVRLTAYRRALAPVVRGQVSFVSPDLIEDP 370

Query: 379 NNLQTQEYYE--VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +  T  Y+E  V L    LA   + + L  G P EV  +         ++ PI
Sbjct: 371 RDGTT--YFEARVTLDPESLAEQPDWVRLSAGMPVEVSVSTGERRAGDYLLEPI 422


>gi|258624075|ref|ZP_05719027.1| secretion protein, HlyD family [Vibrio mimicus VM603]
 gi|258583685|gb|EEW08482.1| secretion protein, HlyD family [Vibrio mimicus VM603]
          Length = 496

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 87/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  ITW+    I+      G+++    V  I++   G++K+  
Sbjct: 60  NTPHSARIILWVMVAFFILAITWAAWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 119

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++ + F
Sbjct: 120 VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IINEDF 174

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 175 EEK-----NWTNSVRLDYSKLAFPPVLSDTQPEL---VDRQRDQYRQDLDNLRNQLSVLS 226

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 227 QQIKQKQQDLIEAEARVVNLRQSYNFAKKELDITEPLANEGVVPKIELLKLQRQLNDTRR 286

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 287 ELTSTELKIPVLKAAVREALLSRINAAQKFRTEQQDKLNQAQDKLSALTESAVGLEDKVN 346

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 347 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPELPA 406

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 407 IVKFTAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDKNLPIIP 463

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 464 GMTASVDIITGKRTVL 479


>gi|258544265|ref|ZP_05704499.1| protein secretion ABC efflux system, membrane fusion protein
           [Cardiobacterium hominis ATCC 15826]
 gi|258520503|gb|EEV89362.1| protein secretion ABC efflux system, membrane fusion protein
           [Cardiobacterium hominis ATCC 15826]
          Length = 409

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 84/422 (19%), Positives = 157/422 (37%), Gaps = 64/422 (15%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +   + W+    +E      G I+    +  I+S   GI+ K  V+ G  +  G  L+T 
Sbjct: 43  LTAFVIWAYNSDLEEVTRGQGSIIPSSRLQVIQSLDPGILAKLHVKEGDLVEAGDILVTI 102

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +D  ++ ++   +  + NL   +   +S                E+ +E L     K+ +
Sbjct: 103 DDTRSSAVLRESEAKVVNLEAMLARYRS----------------EAYDEPL-----KFPA 141

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + +K      +S Y++                    + +L  A+    Q    + + +  
Sbjct: 142 SVAKELRDRETSAYKA-------------------RRRALDEAVTGLQQSKRILDEQIRR 182

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             A+ +  ++        S +EL     E  ++   INE  ++   E  N L     +L 
Sbjct: 183 TAAMVKRGVS--------SEIELLRMQRESADLALQINERRNQYKTEANNELVRTEAELA 234

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q +   A     +       E+  I SP+ G +   +  +        Q +M+IVP    
Sbjct: 235 QARENLAMHADPV-------ERANIRSPMRGIVNNIKITTVGGVINAGQDIMEIVPIDDT 287

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-IISQQDN----NLQ 382
             ++A + P+ +  V  G  A V+   Y          ++  I P  +S +      NL 
Sbjct: 288 LLVQAYIRPQDVAFVHPGLPAVVKLSAYDYAIYGGLDGVVTLISPDTLSDERRRSELNLD 347

Query: 383 T-QEYYEVILKITDLAFSD-NNIELR--NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             Q YY V+++  +   +D N  ELR   G  A V     N ++ Q +I PIT     + 
Sbjct: 348 ANQSYYRVLVETKNSKLTDKNGKELRILPGMVATVDIKTGNKSVFQYLIKPITRMKQALH 407

Query: 439 ER 440
           ER
Sbjct: 408 ER 409


>gi|332716185|ref|YP_004443651.1| rhizobiocin secretion protein [Agrobacterium sp. H13-3]
 gi|325062870|gb|ADY66560.1| rhizobiocin secretion protein [Agrobacterium sp. H13-3]
          Length = 437

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 87/435 (20%), Positives = 169/435 (38%), Gaps = 45/435 (10%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
           S+  + G+  W+    +  +V +SG ++ +  + +++ P  G++ +  V  G ++  G  
Sbjct: 25  SVALLAGVGGWAATTNLAGAVVASGHLVVDSYIKKVQHPKGGVVGEILVSEGGRVKAGDV 84

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           ++  +  +T              R ++      LD L+ +   LE   +   E +     
Sbjct: 85  VMRLDATQT--------------RANLAIVTKRLDELSARMARLEAERDDLPELVFP--- 127

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY--------LNRL-DLENKSSLLRAL--- 191
              +  ++  +  ++S  RS + +L   R  Y        + R+   E++   LRA    
Sbjct: 128 --QALVARKDDPDVASAMRS-ETRLFEFRKSYREGRKAQLVERITQFEHEIEGLRAQEVA 184

Query: 192 ----LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
               L+  Q ++T  K+L E+  VS   LN  +        E  E I  Q      I E 
Sbjct: 185 YDNGLAVLQAEITSQKSLREQGIVSVQRLNSLQTQAATFGGERGEKIAYQAQTAGRITET 244

Query: 248 YDEANLEFANYLK-EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             +  L+    L+ E+ R+L + Q    + + +    E   ++  I++P +G +      
Sbjct: 245 KLQI-LQIDQELRTEVGRELREIQAQTGEYVERKVAAEDELKRIDIIAPQSGMVHEMAVH 303

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       + P+M IVP      +  ++ PK I  ++ G  A +R   +      + +  
Sbjct: 304 TVGGVVTPADPIMLIVPDGDELALEVQIVPKDIDQLQVGQKAMLRMTAFNQRVTPELEGH 363

Query: 367 IEKIDP-IISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLA 423
           + +I   I + Q   L    YY   + I  +A  +  N   L  G PAE        T  
Sbjct: 364 VSRIAADITTDQRTGL---SYYLARISIP-VAEREKLNTAPLMPGMPAEAFIQTSERTAL 419

Query: 424 QEIIHPITDNWPKIF 438
             I  P+TD   + F
Sbjct: 420 SYIAKPLTDQINRAF 434


>gi|158426291|ref|YP_001527583.1| type I secretion membrane fusion protein [Azorhizobium caulinodans
           ORS 571]
 gi|158333180|dbj|BAF90665.1| type I secretion membrane fusion protein [Azorhizobium caulinodans
           ORS 571]
          Length = 482

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/250 (19%), Positives = 105/250 (42%), Gaps = 24/250 (9%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + +LT +++L +K  VS+  L + +R   +    +  N  +       I E+  +     
Sbjct: 235 EDELTGIRSLSDKGLVSKPRLAELQREKARLQGLVGRNTADAAKAQNTIGEMKLQIQQLL 294

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI--VYNQSFSSSNYAQ 313
               +++++ + + ++  +D   KL + E   ++  I +P AG +  +  + ++     +
Sbjct: 295 QKQQEDVAQQMVETRQKISDVTEKLAVSENVLKRVDIRAPRAGVVQNINPRIYTIGAVVK 354

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               L++IVP +    + A+V P  +  +  G T            E +F A   +  P+
Sbjct: 355 PGDTLLEIVPQNDELIVDAQVAPTDVDRLHDGITGV----------EVRFTAFHSRTTPL 404

Query: 374 ISQQDNNLQT---------QEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
           I  +  ++           Q Y++ ++ +  TD+   D    LR G PAEV+      T+
Sbjct: 405 ILGELRSVSPDRLVDEATKQPYFQAVVAVAKTDIP-EDMKARLRPGMPAEVVIGTGERTV 463

Query: 423 AQEIIHPITD 432
              +  P+ D
Sbjct: 464 LSYLTRPLVD 473


>gi|86355991|ref|YP_467883.1| HlyD family protein secretion protein [Rhizobium etli CFN 42]
 gi|86280093|gb|ABC89156.1| probable protein secretion protein, HlyD family [Rhizobium etli CFN
           42]
          Length = 406

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 83/426 (19%), Positives = 177/426 (41%), Gaps = 56/426 (13%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ L P++ +  + G +    +   I+    GII      NG  +  G  LL  +D +  
Sbjct: 5   WATLAPLDSAAVAPGLVKVAGDRKLIQHLEGGIIAGLTAANGDIVKAGKVLLQLDDTQAR 64

Query: 94  DLIDL-------KKVSIKNLRCHIDTEKSALDF----LNNKYDVLEKAFESREEQLLDFL 142
             +DL       ++     LR   D  K+ ++F    L N       A  ++ +    F 
Sbjct: 65  ARLDLVQNRIATREALAARLRAERDG-KAEIEFDPALLANPTKSARDAVAAQRDV---FS 120

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            K+H+   +     +S   R  + ++T ++ + +     E+K      +     +DL   
Sbjct: 121 AKHHNLKDE--REILSQRRRQTEEEITGLQELIVT----EDKQI---EVFEGETRDL--- 168

Query: 203 KNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANY 258
           ++L ++  V++     L +Q+R V          I   ++ +  I+ ++ +   L+    
Sbjct: 169 ESLVKRGLVTRERWLLLRRQQREVEGERATNVAAIARARSAMAEIDMQIVNLNTLQLNQA 228

Query: 259 LKEISR------DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           ++E+S+      DL Q +R+  D      +L +T     +++P+ G I+  +  ++    
Sbjct: 229 VEELSKVEAELFDLRQEERSAKD------VLART----NVVAPVDGIIMDLKVHTTGGVV 278

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-- 370
           +  + LM IVP  +   I A V P+ ++ +  G  A V FP +A         ++E +  
Sbjct: 279 KPGETLMTIVPMGQQLVIEAMVRPEDVETIASGQPARVSFPAFARYNLPPLDGVVEIVSA 338

Query: 371 DPIISQQDNNLQTQEYYE--VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           D ++ ++        ++   V++  ++LA  +   +L  G  +E +      T+   +  
Sbjct: 339 DRMVEERSG----APFFAATVVIDQSELAKLEGR-KLLPGMSSETMIRTGARTVLSYLAE 393

Query: 429 PITDNW 434
           PIT N+
Sbjct: 394 PITQNF 399


>gi|329909460|ref|ZP_08275072.1| type I secretion membrane fusion protein, HlyD family
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327546458|gb|EGF31457.1| type I secretion membrane fusion protein, HlyD family
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 465

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 80/411 (19%), Positives = 164/411 (39%), Gaps = 34/411 (8%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
           +++ +I  + W+   PI+      G+++    V  I++   GI+ +  V  G  + Q   
Sbjct: 59  AVLFVIIAVVWAAFAPIDEITIGEGKVIPSGQVQVIQNLEGGIVSEIPVHIGELVQQNQI 118

Query: 84  LLTFEDIETTDLID-----LKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESR 134
           +L  +    +  +D      + +  K  R   +T  SA     + L     ++E+     
Sbjct: 119 VLVLDKTRFSSSVDEVTAKYEALQAKIARLAAETVGSAFVAPPELLRANPKIVEE----- 173

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E+QL     +   +   V     +   + L+ K  RM       + LE    L+      
Sbjct: 174 EKQLYQNRQRELESALTVLREQANQRTQELREKRARM-------VQLEESQRLV------ 220

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++LT+ K +  +  +S+ ++ + ER V     E          + + I E + + N +
Sbjct: 221 -TRELTISKPMVAQGVLSEVEVLRLERQVSDFRGEAEAARLAIPRIEQSIAEAHAKENGQ 279

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A +  + + +L   +  F    +    +     +  I SP+AG +   +  +     Q 
Sbjct: 280 LAKFRSDAATELNLARSEFEQSRASGVAMADRLARTEIRSPVAGLVKTLKVSTVGGVIQP 339

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              LM+IVP +    I A+V P  +  +  G  ATV+   Y D     +  +   ++ I 
Sbjct: 340 GMDLMEIVPIANNLLIEARVRPADVAFLHPGQHATVKLSAY-DF--SIYGGLDATLENIT 396

Query: 375 SQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEV-LFTAKNTTL 422
           +    N + + +Y+V ++ +  +L   D N+ +  G  A + + T K T L
Sbjct: 397 ADSITNDEGESFYQVRVRTSRNNLGSGDKNLPIIPGMTATIHIRTGKKTVL 447


>gi|167588415|ref|ZP_02380803.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ubonensis Bu]
          Length = 412

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 81/438 (18%), Positives = 179/438 (40%), Gaps = 70/438 (15%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           L  W+ L P+  +V + G +  +     ++    GI+K  +V++G ++  G  L+  +++
Sbjct: 3   LAFWASLAPLSGAVVAEGVVRTQGERKTVQHQEGGIVKAIRVKDGDRVKAGQVLVVLDNV 62

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTC 149
                       +  LR   D E++ +  L+ + ++ ++ AF +      D  G+ H   
Sbjct: 63  SPA-------AELAALRAQRDAEQARIARLSAERELKDRLAFPA------DLTGRQHDP- 108

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-- 207
                +    + R   +  TR R+        +++ S+LRA L+  ++++T+   L +  
Sbjct: 109 -----HVAELLQRESTLFATRRRT-------FQDQMSMLRAELAHTRQEITVSAQLVQTM 156

Query: 208 ----KNAVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
                 AV Q + N+   R  + + +++ +    + + L  +      A  E +   ++ 
Sbjct: 157 GGSHAMAVRQRETNEALNREGFVADMKVLDTRRVEADALSRMQS----AKAELSRA-RQR 211

Query: 263 SRDLE------QNQ--RTFADEMSKLT-----ILEKTRE------QKTILSPIAGTIVYN 303
             DLE      +N+  RT  DE+ + T     + E+ R       +  + +P+ GT+V  
Sbjct: 212 QVDLEMKIAGLRNEYIRTADDELKEATSRAFQLGERLRPAQDASIRAQVTAPVDGTVVGL 271

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +        +P++ +VP      + A V P  ++ +  G  A VR   Y+       
Sbjct: 272 RVHTIGAVVGPREPIVDVVPAGAPLIVEANVRPDDVRAIVPGGHADVRLTAYSSRTTPML 331

Query: 364 KAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNN------IELRNGFPAEVLF 415
           +  +  +  D +  ++  +     +Y V +++   A +  N      + L  G  AEV  
Sbjct: 332 EGRVAYVSADALTDKEARS----HFYVVRVEVPADAVARANRLAAQTVSLGPGLRAEVYI 387

Query: 416 TAKNTTLAQEIIHPITDN 433
             +  +    ++ PI D 
Sbjct: 388 RKQARSALDYLLEPIVDG 405


>gi|260221994|emb|CBA31114.1| hypothetical protein Csp_C26930 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 391

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 19/242 (7%)

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDEANL 253
           K+L + + L +  A+S  +L + ER V +   E      +I   ++ +   N    E  L
Sbjct: 150 KELELTRPLVKTGAISDVELLRLERDVARYRGERDSANSDIPRLESAVAESNRKIQEVEL 209

Query: 254 EFANYLK-EISRDLEQNQRTFA-DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            F N  + E+S   E N +  A  E S  T LE   +Q  I SP+ GT+   +  +    
Sbjct: 210 TFRNIARSELS---ETNAKLNALSEGS--TALEDRVKQTEIRSPVNGTVKQLRVNTVGGV 264

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI- 370
            Q  + L+++VP      + A+V P+ I  ++ G  A V+F  Y        +A +E+I 
Sbjct: 265 VQPGKDLIELVPSDDALLLEARVLPRDIAFLRPGQKALVKFTAYDFAVYGGLEATLEQIG 324

Query: 371 -DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLAQEIIH 428
            D ++ ++ N      ++ V ++          + +  G  AEV + T K + LA  ++ 
Sbjct: 325 ADSVVDEKGNA-----FFVVRVRTLSTTIGQQKLPIIPGMVAEVDILTGKKSVLAY-LMK 378

Query: 429 PI 430
           PI
Sbjct: 379 PI 380


>gi|114766809|ref|ZP_01445743.1| type I secretion membrane fusion protein, HlyD family [Pelagibaca
           bermudensis HTCC2601]
 gi|114541003|gb|EAU44061.1| type I secretion membrane fusion protein, HlyD family [Roseovarius
           sp. HTCC2601]
          Length = 435

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 11/179 (6%)

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           RD++   R  A++  +L +LE+ +  + I +P+AG +     F+  +  + + P++ +VP
Sbjct: 261 RDMQYRSRELAEQ--RLALLEQLKRLE-ITAPVAGVVYGMTVFAPRSVIRAADPVLYLVP 317

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             +   I A++ P  I     G   T+RF   + + ++    +   +  I +    N +T
Sbjct: 318 QDRPLVIAAQIEPIHIDQTHVGQEVTLRF---SALDQRTTPELFGTVTQISADAFTNEET 374

Query: 384 Q-EYY--EVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLAQEIIHPITDNWPKIF 438
              YY  E+IL   +         L  G P E  L TA  T LA  ++ P TD + K F
Sbjct: 375 SVSYYRAEIILNEGEAEKLPEGSTLIPGMPVEAFLRTADRTPLAY-LVKPFTDYFSKAF 432


>gi|320158189|ref|YP_004190567.1| membrane-fusion protein [Vibrio vulnificus MO6-24/O]
 gi|319933501|gb|ADV88364.1| membrane-fusion protein [Vibrio vulnificus MO6-24/O]
          Length = 446

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 13/151 (8%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +PI+G +V  + F+     +  + L+++VP      + A+V+P+ I  +  G  A VR
Sbjct: 302 IRAPISGKVVNMKVFTEQGVIRSGETLLELVPDDDSLIVEARVSPQDIDLISPGLDARVR 361

Query: 352 FPHY-ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRN 407
                A I+E     ++      +S+Q+     ++YY     +  +A +D +    +L  
Sbjct: 362 LTALNARIQEPLNGKVLTVSADKLSEQNK----EDYY-----LARIALNDQDAQQHQLTA 412

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G  AEVL  ++  T    ++ PIT+++ + F
Sbjct: 413 GMNAEVLILSRPRTPISYLLKPITESFNRAF 443


>gi|302184986|ref|ZP_07261659.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae 642]
          Length = 445

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 80/428 (18%), Positives = 158/428 (36%), Gaps = 35/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G      W+ L P++  ++  G ++       ++S   G++ K  V  G  + +G
Sbjct: 27  ILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQLVKEG 86

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL-EKAFESREEQLLD 140
            PL   +  +        +  +++LR       ++L    ++ D L E  F +  E +  
Sbjct: 87  EPLFRLDQTQV-------EADVQSLRAQYRMAWASLARWQSERDNLNEVRFPA--ELIAA 137

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALL 192
             G+       +   G   ++ S +  L R +S          L    +    S L A  
Sbjct: 138 GQGQDPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQA 197

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S +K L+ ++ L +   +  N L + +R + +    L +N  E   + + I E      
Sbjct: 198 DSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQGIVESRLRIQ 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQS 305
            +   Y KE+       +  +AD   K   LE+       + +   IL+P  G  V    
Sbjct: 258 QQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNLGV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + L++IVP      +  ++  + I  V       + F  +   R  +   
Sbjct: 311 HTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVSG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     Q  +    Q YY +   + D A    N + ++ G PAE+       +L  
Sbjct: 371 EVSLIS--ADQMQDEKTGQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTGERSLLN 428

Query: 425 EIIHPITD 432
            +  P+ D
Sbjct: 429 YLFKPLLD 436


>gi|153971521|ref|YP_001393061.1| RTX toxin transporter [Vibrio vulnificus]
 gi|153971717|ref|YP_001393218.1| RTX toxin transporter [Vibrio vulnificus]
 gi|152955043|emb|CAL25395.1| RTX toxin transporter [Vibrio vulnificus]
 gi|152955202|emb|CAL25552.1| RTX toxin transporter [Vibrio vulnificus]
          Length = 453

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 70/372 (18%), Positives = 160/372 (43%), Gaps = 40/372 (10%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T +++ IG++  + W+    +++  +++G ++     
Sbjct: 20  HHYEFLPAHLALAQKPPSPFARLTAITLSIGVLAALLWAYWGKLDVQATATGRLVVSGRS 79

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI----ETTDLIDLKKVSIKNLRCHIDT 112
             I+S     +    V++G ++ +G PLLT + +    + T LI   +     L  +   
Sbjct: 80  QVIQSYEQSRVMIIHVKDGQRVEKGAPLLTLDTLGVNQDITRLITQSEFQTNELIRY--- 136

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  LN++  V +  F +   +    + + + +  + FN  ++S++  +++      
Sbjct: 137 ----RTLLNDQPLVQDPMFTALPAEQQALITENYLSEQREFNSTLASIHAEMQV------ 186

Query: 173 SIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
               N+     + S + AL+   +   + L   K L +   +   +  +QE    K  LE
Sbjct: 187 ----NKTSQAARQSDINALVQLTENISQRLEARKTLNQVKVIGHVEYLEQE----KELLE 238

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTRE 288
            +  + +Q+  L+ +   Y       + +  +  R+  + +R    +++ L   L K RE
Sbjct: 239 AQRQVSQQRAELQVLKSQYRSLEERLSGFKAQKQREWLEKRRQAKLQLAALNQELSKVRE 298

Query: 289 QKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           ++    I SP+ GT+     ++     Q +Q LM IVP + +     ++  K +  +  G
Sbjct: 299 REQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENSVQLAEVQLLNKDVGFIYPG 358

Query: 346 YTATVR---FPH 354
            + TV+   FP+
Sbjct: 359 QSVTVKVDAFPY 370


>gi|37676046|ref|NP_936442.1| membrane-fusion protein [Vibrio vulnificus YJ016]
 gi|37200586|dbj|BAC96412.1| membrane-fusion protein [Vibrio vulnificus YJ016]
          Length = 446

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 13/151 (8%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +PI+G +V  + F+     +  + L+++VP      + A+V+P+ I  +  G  A VR
Sbjct: 302 IRAPISGKVVNMKVFTEQGVIRSGETLLELVPDDDSLIVEARVSPQDIDLISPGLDARVR 361

Query: 352 FPHY-ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRN 407
                A I+E     ++      +S+Q+     ++YY     +  +A +D +    +L  
Sbjct: 362 LTALNARIQEPLNGKVLTVSADKLSEQNK----EDYY-----LARIALNDQDAQQHQLTA 412

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G  AEVL  ++  T    ++ PIT+++ + F
Sbjct: 413 GMNAEVLILSRPRTPISYLLKPITESFNRAF 443


>gi|261822560|ref|YP_003260666.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium wasabiae WPP163]
 gi|261606573|gb|ACX89059.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium wasabiae WPP163]
          Length = 389

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 81/392 (20%), Positives = 153/392 (39%), Gaps = 74/392 (18%)

Query: 23  LSIIGIIGLITWSILLPI-EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LS++G++    W+    + E+SV + G++        I+S   GII +  V+ G+ + +G
Sbjct: 23  LSLLGLVVFFVWAKFAVLDEVSVGT-GKVTPSTRAQVIESLDGGIIGQLYVQQGNVVEKG 81

Query: 82  TPLLT-----FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
             L       F+ +       ++ +     R + +     L F  +   + E A  +RE 
Sbjct: 82  QVLAQLDINRFQSVYGEAFSRVQTLRASAERLYAELSGEPLKF--SAETMKEPALAARER 139

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           QL      Y S                      R+R+      +L+    L+       +
Sbjct: 140 QL------YES----------------------RLRNRDETIANLQQSMRLV-------E 164

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L M + L ++ A S  ++           + LR  I E +  +       DEA+ ++A
Sbjct: 165 QELRMTEPLVQRGAASAVEV-----------IRLRRQISEIRGKI-------DEASNQYA 206

Query: 257 NYLKEI----SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              +E     + DLE  +   + +  +L       ++ TI SP+ G +   Q  +     
Sbjct: 207 VRAREEQVKNNADLEAQREVVSGKADQL-------KRATITSPVRGIVKDIQVTTVGGVL 259

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           Q    LM+IVP      I  ++ P+ I +++ G  ATV+   Y           +E + P
Sbjct: 260 QPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKITAYDSSIYGNLTGEVESVSP 319

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             + QD   + Q YY V ++ T    ++   E
Sbjct: 320 -DTLQDEVRRDQFYYRVYVRTTQAELTNKAGE 350


>gi|254228704|ref|ZP_04922127.1| type I secretion membrane fusion protein, HlyD family [Vibrio sp.
           Ex25]
 gi|262396574|ref|YP_003288427.1| membrane-fusion protein [Vibrio sp. Ex25]
 gi|151938651|gb|EDN57486.1| type I secretion membrane fusion protein, HlyD family [Vibrio sp.
           Ex25]
 gi|262340168|gb|ACY53962.1| membrane-fusion protein [Vibrio sp. Ex25]
          Length = 446

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 28/248 (11%)

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           S +  L  +K L  +   + + L++Q   V K   E +  I E K  L  +NE+ +E   
Sbjct: 221 SGKSTLLQLKRLAAEVRSTLSQLDRQSLTVSKRLDENQAQIEELK--LERLNEIVEE--- 275

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              N  KEI   + +  R+  D      I+ +T    TI +PIAG +V  Q F+      
Sbjct: 276 -LRNTKKEIVA-IREEYRSAQD------IVART----TINAPIAGRVVNMQVFTEKGVIG 323

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             + L+++VP      + A+V P+ I  V  G  A VR               +  I   
Sbjct: 324 SGETLLELVPQDDKLLVEARVNPQDIDLVNPGQQAHVRLTALNARTLAPLDGTVLTISAD 383

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              Q+N    +++Y     +  +A S  ++    L +G  AEVL  ++  T    +I PI
Sbjct: 384 KLSQENQ---EDFY-----LARIAISQEDVAKHRLTSGMNAEVLILSEPRTPLSYLIKPI 435

Query: 431 TDNWPKIF 438
           T++  + F
Sbjct: 436 TESMNRAF 443


>gi|194334993|ref|YP_002016853.1| secretion protein HlyD family protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194312811|gb|ACF47206.1| secretion protein HlyD family protein [Prosthecochloris aestuarii
           DSM 271]
          Length = 392

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 27/282 (9%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK--NAVSQNDLNQQERIVYK 225
           L R R +Y + L L    S L A        +T   +L      A++   +  Q  +   
Sbjct: 108 LARYREVYQHYLGLRAAESRLLAE-ERGASSITFHPDLLRSPDTALAAEMMATQRELFTA 166

Query: 226 STLELRENIHEQKNMLRHINELYDE--ANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
               +R      K +   ++E Y      LE   +L E+     Q+QR  A EM+ + + 
Sbjct: 167 RQQAMRSVCERLKGVRAMVSEGYAPRYQQLELEGHLAEL-----QSQR--ASEMAAVQVA 219

Query: 284 -----EKTR------EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                EKT       E+  I SP +G +V  Q  +        + +M IVP  +   +  
Sbjct: 220 VDAWQEKTAALHDELERTGIRSPASGQVVGLQVQTVGAVISPGEKIMDIVPLDEKLLVEV 279

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNN-LQTQEYYEV 389
           +V P  I  V  G  A +RF  +A         ++E +  D I   + N  +    YY  
Sbjct: 280 RVAPHLIDRVHSGLPADMRFASFAHSPMLMVGGVVESVSHDLITDPKMNPVMPGATYYLA 339

Query: 390 ILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            + +T    +   + +L+ G P + +      TL   ++HP+
Sbjct: 340 RVALTPEGIASLGSRKLQAGMPVQTVIRTGERTLLTYLLHPL 381


>gi|99082318|ref|YP_614472.1| Type I secretion membrane fusion protein, HlyD [Ruegeria sp.
           TM1040]
 gi|99038598|gb|ABF65210.1| Type I secretion membrane fusion protein HlyD [Ruegeria sp. TM1040]
          Length = 440

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 74/369 (20%), Positives = 161/369 (43%), Gaps = 61/369 (16%)

Query: 16  SLKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           S++   +   +G+I    G  TW++   I  +V +SG+I  + N   ++    G+++   
Sbjct: 14  SVRGALIAGALGVIILLGGFGTWAVFSNIAGAVVASGQIEVDRNRQVVQHIDGGVVEDIL 73

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLE 128
           V+ G  +  G  L+  + ++    + + +  +  +   R  ++ E+  +D ++   ++L 
Sbjct: 74  VDEGDLVTAGQTLVRLDAVDLRSQLTITEGQLFEMMARRGRLEAERDEVDTISFDAELLT 133

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM----------KLTRMRS----- 173
            A +  E      + +     +++F     SV R ++           ++T +R+     
Sbjct: 134 LAQQRPE------VAELVEGQARLFRARRESVRREVEQLEKRAVQIEDQITGVRAQQEAT 187

Query: 174 ---IYLNRLDLENKSSLL-RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
              + L + +L N+ SLL R L  +     +++ NL    A  Q  L +    +  S  +
Sbjct: 188 REQLVLIKEELSNQQSLLDRGLAQA-----SVVLNLRRNQANLQGTLGE----LIASEAQ 238

Query: 230 LRENIHE-QKNMLRHINELYDEANLEFANYLKEIS-RDLE--QNQRTFADEMSKLTILEK 285
            R  I E +   L+  N+  +EA       L+++  R+LE  + +R+  D + +L I   
Sbjct: 239 ARGRITEIEIEALKLRNQRREEA----ITRLRDLRYRELELIETRRSLIDRLGRLDIT-- 292

Query: 286 TREQKTILSPIAGTIVYNQSFSSS-NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
                   +P++G +VY  S  +  +  + + P++ +VP  +   I A+V P  I  +  
Sbjct: 293 --------APVSG-VVYGMSVRTPRSVIRPADPVLYLVPQDRPLVIAARVAPTDIDQIHV 343

Query: 345 GYTATVRFP 353
           G   ++R P
Sbjct: 344 GQAVSIRLP 352


>gi|27367919|ref|NP_763446.1| membrane-fusion protein [Vibrio vulnificus CMCP6]
 gi|27359492|gb|AAO08436.1|AE016813_188 Membrane-fusion protein [Vibrio vulnificus CMCP6]
          Length = 446

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 13/151 (8%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +PI+G +V  + F+     +  + L+++VP      + A+V+P+ I  +  G  A VR
Sbjct: 302 IRAPISGKVVNMKVFTEQGVIRSGETLLELVPDDDSLIVEARVSPQDIDLISPGLDARVR 361

Query: 352 FPHY-ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRN 407
                A I+E     ++      +S+Q+     ++YY     +  +A +D +    +L  
Sbjct: 362 LTALNARIQEPLNGKVLTVSADKLSEQNK----EDYY-----LARIALNDQDAQQHQLTA 412

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G  AEVL  ++  T    ++ PIT+++ + F
Sbjct: 413 GMNAEVLILSRPRTPISYLLKPITESFNRAF 443


>gi|332184083|gb|AEE26337.1| Membrane-fusion protein [Francisella cf. novicida 3523]
          Length = 490

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 90/375 (24%), Positives = 157/375 (41%), Gaps = 34/375 (9%)

Query: 14  PASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P  L R  L  +I +I   + W+    I+I  +  G+I+   +V  I+S   G + K  V
Sbjct: 62  PHPLLRTILYCLIFLIVFTVVWAYFCKIDIITAGQGKIIPAGDVKTIQSSEKGTVIKLNV 121

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD---VLEK 129
           ++G  +  G  L+  E   T   I+  K  I+  +  I  E++    LN+       LEK
Sbjct: 122 DSGQIVKAGDILVVLESEYTESDINKLKEDIEFYKLRISREQTFYKMLNSGLKEQIPLEK 181

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              +  + + D L    S    ++    S++ + + ++ T +       + L NK+  L 
Sbjct: 182 LDYNPPQDVTDELDIEQSR-QLLWQEWQSTIAKLMTLEATMLSKEQEKEISL-NKTHQLE 239

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI--------HEQKNML 241
           A +   ++ L     L++K AV+        R+ Y   LE RE           E+K  L
Sbjct: 240 ATIKIIKEKLETYTKLYKKKAVA--------RMEY---LEFREKFINTYYELETEKKKDL 288

Query: 242 RHINELYD-EANLE---FANYLKEISRDLEQNQRTFA--DEMSKLTILEKTREQKTILSP 295
           +   E+ +  +NLE      YLK + +  +  +  F+   E+ K T L     +  I SP
Sbjct: 289 QLDAEIAEARSNLESYKSETYLKTLEKIRQDKKDLFSAEQELHKATTLNG---KNIIRSP 345

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           I G +   Q  +       +Q LM+IVP  +       V  + I +++KG TA V+   +
Sbjct: 346 IDGVVHEMQIHTIGAVVTPAQVLMQIVPIDQKLEAEVYVKNEDIGYLRKGQTAEVKVNTF 405

Query: 356 ADIREKKFKAIIEKI 370
                   +  +EKI
Sbjct: 406 PFAEYGVLEGTVEKI 420


>gi|262173249|ref|ZP_06040926.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio mimicus MB-451]
 gi|261890607|gb|EEY36594.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio mimicus MB-451]
          Length = 463

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 87/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  ITW+    I+      G+++    V  I++   G++K+  
Sbjct: 27  NTPHSARIILWVMVAFFILAITWAAWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++ + F
Sbjct: 87  VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IINEDF 141

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 142 EEK-----NWTNSVRLDYSKLAFPPVLSDTQPEL---VDRQRDQYRQDLDNLRNQLSVLS 193

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 194 QQIKQKQQDLIEAEARVVNLRQSYNFAKKELDITEPLANEGVVPKIELLKLQRQLNDTRR 253

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 254 ELTSTELKIPVLKAAVREALLSRINAAQKFRTEQQDKLNQAQDKLSALTESAVGLEDKVN 313

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 314 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPELPA 373

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 374 IVKFTAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDKNLPIIP 430

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 431 GMTASVDIITGKRTVL 446


>gi|330900588|gb|EGH32007.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 445

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 80/430 (18%), Positives = 163/430 (37%), Gaps = 39/430 (9%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G      W+ L P++  ++  G ++       ++S   G++ K  V  G  + +G
Sbjct: 27  ILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQLVKEG 86

Query: 82  TPLLTFEDIET-TDLIDLK---KVSIKNLRCHIDTEKSALDFLNNKYDVLEKA----FES 133
            PL   +  +   D+  L+   +++  +L     +E+  LD +    +++        + 
Sbjct: 87  EPLFRLDQTQVEADVQSLRAQYRMAWASL-ARWQSERDNLDEVRFPAELIAAGQGQDPDP 145

Query: 134 REEQLLDFLGKYHSTCSKVF---NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           R   +L+   +  S+  +       G+ +      M+L  MR     R DL  ++  LR 
Sbjct: 146 RLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGMQLAGMRRA---RSDLLAQADSLR- 201

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                 K L+ ++ L +   +  N L + +R + +    L +N  E   + + I E    
Sbjct: 202 ------KQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQGIVESRLR 255

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYN 303
              +   Y KE+       +  +AD   K   LE+       + +   IL+P  G  V  
Sbjct: 256 LQQQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNL 308

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +     +  + L++IVP      +  ++  + I  V       + F  +   R  + 
Sbjct: 309 GVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRV 368

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
              +  I     Q  +    Q YY +   + D A    N + ++ G PAE+       +L
Sbjct: 369 SGEVSLIS--ADQMQDEKTGQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTGERSL 426

Query: 423 AQEIIHPITD 432
              +  P+ D
Sbjct: 427 LNYLFKPLLD 436


>gi|186895546|ref|YP_001872658.1| HlyD family type I secretion membrane fusion protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|186698572|gb|ACC89201.1| type I secretion membrane fusion protein, HlyD family [Yersinia
           pseudotuberculosis PB1/+]
          Length = 456

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 141/343 (41%), Gaps = 51/343 (14%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+I+  ++I  S+SG+++  ++   I+    G++ +  V +G  +  G  L+    I   
Sbjct: 60  WAIIGKLDIHASASGKVIVAEHSKIIQPAEPGVVTEINVRDGDTVDAGQVLIALNPIG-- 117

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES---REEQLLDFLGKYHSTCS 150
             ID     ++N+   +            +Y  LE A       +E L +F   Y+S  S
Sbjct: 118 --ID---AEVRNINQQL------------QYRQLEAARLVALLADEPLKNFKPPYNSPES 160

Query: 151 KVFNYG--ISSVYRSLKMKLTRMRS-IYLNRLDLE---NKSSLLRALLSSHQKDLTMMKN 204
            V      ++  Y  +  +L+R  S + +N+  L+     +S  +ALL +  + L   + 
Sbjct: 161 LVVASRALLTKEYAEVTAELSRQDSELAVNQAHLQAGIEHNSHQKALLKNIHRRLQASRT 220

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLE----------LRENIHEQKNMLRHINELYDEANLE 254
           L +  ++++ +L  QER    +T E          LR   H       H     D  N E
Sbjct: 221 LAKSKSIAEVELLVQEREWLTATAEANRLQSEQDILRAKAHSLAQTRMHYLAKIDRDNRE 280

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N   EI   L+Q Q         + +++K R+Q T+ +P+AG I      +       
Sbjct: 281 RLNKTHEIIHQLQQEQ---------IKMMDKQRQQ-TLRAPVAGVIQQLAVHTLGGVVTT 330

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           +QPLM +VP      +   +  K +  V  G    V+   FP+
Sbjct: 331 TQPLMVLVPEDYQLELDVMILNKDVGFVLPGQAVEVKVDSFPY 373


>gi|149912601|ref|ZP_01901135.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. AzwK-3b]
 gi|149813007|gb|EDM72833.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. AzwK-3b]
          Length = 442

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 91/453 (20%), Positives = 171/453 (37%), Gaps = 66/453 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEI-LNED-NVVEIKSPFSGIIKKFQV 72
           A L   TLL    +  +  W+    +  +V  SGE+ +N D  VV+ +    GI+K+   
Sbjct: 24  AGLVMATLL----VAAIFGWAANANLASAVVVSGEVSVNRDLRVVQHRD--GGIVKEIPA 77

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  + +G  LL  +D                      TE++ L     +  + +   E
Sbjct: 78  SAGDYVREGDILLRLDD------------------TSARTERAILHGKIAELAIRKSRLE 119

Query: 133 SREEQLLDF---------------LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           ++ + + +F               L   +    ++F   ISS        ++R   I L 
Sbjct: 120 AQRDLMAEFPMPAGLDELIVTPAALQAIYVGERRIFQGNISSF-------VSRKEQIDLG 172

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL-RENIH- 235
              +  +   L A L + Q ++     L +  +    DL+++   V      + REN+  
Sbjct: 173 IEQVRTEIDGLEARLDAKQDEIL----LVQAESARVEDLSERRLTVRNVAFSIERENVRL 228

Query: 236 --EQKNMLRHINEL---YDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKT 286
             E+  +L  +        E  LE  +  + +  D ++  R    ++S+LT    ++E T
Sbjct: 229 RGERGEILSALGRARSRVSELELEILSMQETLRTDAQRELREIETQLSELTEKRFVIEDT 288

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I +PI+G I      S       ++ L  IVP        A+V    I+ V  GY
Sbjct: 289 LSRTEIRAPISGLINDLNVNSVGGVISPAEILATIVPEEAELVFTARVPAVSIEQVDTGY 348

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIEL 405
            A +RF  +      + +  +  +    +   +     ++Y + + ++ D        EL
Sbjct: 349 AARMRFVAFDQNETPEIEGTVSYV--AAAATSDPQMPGDFYSIKVDVSGDQLARLGGKEL 406

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           R G P EV  T    T    ++ P +D + + F
Sbjct: 407 RPGMPVEVYVTTAERTALSYLVKPFSDQFARAF 439


>gi|89052925|ref|YP_508376.1| Type I secretion membrane fusion protein, HlyD [Jannaschia sp.
           CCS1]
 gi|88862474|gb|ABD53351.1| Type I secretion membrane fusion protein HlyD [Jannaschia sp. CCS1]
          Length = 435

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 68/337 (20%), Positives = 135/337 (40%), Gaps = 33/337 (9%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WS+   +  +V +SG+I  + N   I+ P  G++ +  V+ G ++ +   L+  +  E+ 
Sbjct: 32  WSVSSTLSGAVVASGQIEVDRNRQAIQHPDGGVVAELLVDEGDRVGEAQVLVRLDTSESE 91

Query: 94  DLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + + +  +      R  +  E+  LD L    D++  AF +   ++ + +    +   
Sbjct: 92  TELAVARARLAETAARRVRLQAERDGLDRLTFSEDLV--AFAAGNPEIAEVVAGQRN--- 146

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +F     S+ R  +    R+  I         +   +RA     ++ L     L E   
Sbjct: 147 -LFAARADSLAREEEQLRGRITQIG-------TQVDAMRA----QEEALVEQITLVEDEL 194

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V + DL ++     +  + LR+ + + +  L        EA          I + L   Q
Sbjct: 195 VRREDLLERGSGTVEPVVRLRQELVQLRGQLGQATAGRAEAAERIIETELAILQ-LTTTQ 253

Query: 271 RTFA-DEMSKLTILEKTREQKT-----------ILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           R  A  E+ +L + E+   ++T           + +P+AGTI     F +    + + P 
Sbjct: 254 REQAISELRELRVTEQELVERTANLERRIARLELRAPVAGTIHGLTIFGARAVLRPADPF 313

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             IVP  +   I A+V    I  V +G T ++ FP +
Sbjct: 314 AYIVPEGRPLVISARVPAIDIDQVFEGQTVSLTFPAF 350


>gi|110634941|ref|YP_675149.1| HlyD family type I secretion membrane fusion protein [Mesorhizobium
           sp. BNC1]
 gi|110285925|gb|ABG63984.1| type I secretion membrane fusion protein, HlyD family
           [Chelativorans sp. BNC1]
          Length = 444

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 96/455 (21%), Positives = 179/455 (39%), Gaps = 60/455 (13%)

Query: 14  PASLKRMTLLSII--GII--GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           P S+++ T   II  G+   G   W++  P+  +V + G  +       ++    GIIK+
Sbjct: 17  PRSIRKQTTFGIILLGVTFGGFGGWALTAPLAAAVIAQGSFVATGQNKIVQHFEGGIIKE 76

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLID-----LKKVSIKNLRCHIDTEKSALD------ 118
             V  G Q+    PL+  +  ET  L       L++V ++ +   +  +    D      
Sbjct: 77  ILVNEGDQVKSDQPLILLD--ETAALAKERELFLRQVRLEAISARLYAQLGGKDEIELPA 134

Query: 119 -FLNNKYDVLEKAFESREEQLLDFLG---KYHSTCSKVFNYGISSVYRS---LKMKLTRM 171
              +N+ D   +     E Q L+F     K  S  + V    ++  YR+    K +   +
Sbjct: 135 ILADNRMD--PEVAPILEAQKLNFEAWKTKLGSEVALVEQNIMALGYRAEGYAKQREATI 192

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
             + L + + E K  LL+  L       T MK +    A ++ ++ +    +     E  
Sbjct: 193 IQLGLLKEEAEGKEVLLKQGLIRK----TEMKAIQRAIAEAEGEIAR----LAAEVSETH 244

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +++++  +      Y EA L   + L+ I  +L+             ++ E++R  K 
Sbjct: 245 SQVNKEEQQIIQTKTAYREAVL---DELQRIQAELD-------------SVREQSRAAKN 288

Query: 292 IL------SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           +L      +P+ GT+V     +S    +  + +M+I+P      I A V   +I  VK G
Sbjct: 289 VLQRATINAPVTGTVVRLNYHTSGGVIESGKGIMEILPSDAPLIIEAHVPRNEIDDVKVG 348

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY--EVILKITDLAFSDNNI 403
             AT+R               +  I     + + N   Q++Y   + L  T++A   +  
Sbjct: 349 QEATIRLISLNQRTTPVLNGEVFYISADALKGEPN-APQDFYLARIRLPATEIA-RVSGF 406

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               G PAE+L      T    +  PITD+  + F
Sbjct: 407 TPTPGMPAEILIQTAERTFFSYLTKPITDSMSRAF 441


>gi|148238465|ref|YP_001223852.1| multidrug resistance efflux pump [Synechococcus sp. WH 7803]
 gi|147847004|emb|CAK22555.1| Multidrug resistance efflux pump [Synechococcus sp. WH 7803]
          Length = 383

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 178/423 (42%), Gaps = 65/423 (15%)

Query: 30  GLIT----WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           GL T    W+    ++ ++S  G +    +V E+ SP +G++KK  V  G  +  G PLL
Sbjct: 7   GLFTAVFVWAFTAKVDQTISVRGRLQPTGSVQEVDSPSTGVVKKVFVSEGQLVQAGEPLL 66

Query: 86  TFEDIETTDLIDLKKV---SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
              D+E   L   ++    S + LR    T ++    + +  D+ +        Q+ D  
Sbjct: 67  ---DVEAKGLASRREAIEQSQQILRLQARTLEA---VIRSNGDITKMPPLPPIPQVAD-- 118

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                   ++ N   ++  ++L+++  +++ I   RL   N S  L+  ++        +
Sbjct: 119 -------PELANKLATARNQTLQIR-AQLQQID-TRLASRNVSLRLKQRIADD------V 163

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTL----ELRENIHE-QKNMLRHINELYDEANLEFAN 257
           K LFE  A+++N         Y S L    ELR +I   Q+  +R I           + 
Sbjct: 164 KPLFESGAMARN--------AYLSQLNEVQELRADIATLQEEKVRVIGAA--------ST 207

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L E++R++  N R      S+L  L++T   +TIL+PIAG  V++      +     Q 
Sbjct: 208 QLNEVNREII-NLR------SELVGLKETISYRTILAPIAGR-VFDTQVGPFSVVGTDQV 259

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L+KIVP + L     ++    +  VK G  A+V    +        K  +  I     + 
Sbjct: 260 LLKIVPENSLEA-NVEIPNSDVGFVKVGMPASVSVDSFPSGEFGYIKGTLSSIGSDALKP 318

Query: 378 DNNLQTQEYYEVI-LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
           D   Q  ++  VI L+   +   D  + L++G       TA     ++  I  ITD + K
Sbjct: 319 DQTAQQYQFPGVITLEQQSVQSGDQELNLQSGMG----VTANIKLRSRPAISIITDLFTK 374

Query: 437 IFE 439
            FE
Sbjct: 375 QFE 377


>gi|51596496|ref|YP_070687.1| RTX toxin ABC transporter [Yersinia pseudotuberculosis IP 32953]
 gi|153947202|ref|YP_001400865.1| type I secretion membrane fusion protein, HlyD family protein
           [Yersinia pseudotuberculosis IP 31758]
 gi|170024238|ref|YP_001720743.1| HlyD family type I secretion membrane fusion protein [Yersinia
           pseudotuberculosis YPIII]
 gi|51589778|emb|CAH21408.1| putative ABC associated RTX toxin transporter, HlyD/MFP family
           [Yersinia pseudotuberculosis IP 32953]
 gi|152958697|gb|ABS46158.1| type I secretion membrane fusion protein, HlyD family protein
           [Yersinia pseudotuberculosis IP 31758]
 gi|169750772|gb|ACA68290.1| type I secretion membrane fusion protein, HlyD family [Yersinia
           pseudotuberculosis YPIII]
          Length = 456

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 141/343 (41%), Gaps = 51/343 (14%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+I+  ++I  S+SG+++  ++   I+    G++ +  V +G  +  G  L+    I   
Sbjct: 60  WAIIGKLDIHASASGKVIVAEHSKIIQPAEPGVVTEINVRDGDTVDAGQVLIALNPIG-- 117

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES---REEQLLDFLGKYHSTCS 150
             ID     ++N+   +            +Y  LE A       +E L +F   Y+S  S
Sbjct: 118 --ID---AEVRNINQQL------------QYRQLEAARLVALLADEPLKNFKPPYNSPES 160

Query: 151 KVFNYG--ISSVYRSLKMKLTRMRS-IYLNRLDLE---NKSSLLRALLSSHQKDLTMMKN 204
            V      ++  Y  +  +L+R  S + +N+  L+     +S  +ALL +  + L   + 
Sbjct: 161 LVVASRALLTKEYAEVTAELSRQDSELAVNQAHLQAGIEHNSHQKALLKNIHRRLQASRT 220

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLE----------LRENIHEQKNMLRHINELYDEANLE 254
           L +  ++++ +L  QER    +T E          LR   H       H     D  N E
Sbjct: 221 LAKSKSIAEVELLVQEREWLTATAEANRLQSEQDILRAKAHSLAQTRMHYLAKIDRDNRE 280

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N   EI   L+Q Q         + +++K R+Q T+ +P+AG I      +       
Sbjct: 281 RLNKTHEIIHQLQQEQ---------IKMMDKQRQQ-TLRAPVAGVIQQLAVHTLGGVVTT 330

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           +QPLM +VP      +   +  K +  V  G    V+   FP+
Sbjct: 331 AQPLMVLVPEDYQLELDVMILNKDVGFVLPGQAVEVKVDSFPY 373


>gi|258622089|ref|ZP_05717115.1| secretion protein, HlyD family [Vibrio mimicus VM573]
 gi|258585413|gb|EEW10136.1| secretion protein, HlyD family [Vibrio mimicus VM573]
          Length = 463

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 87/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  ITW+    I+      G+++    V  I++   G++K+  
Sbjct: 27  NTPHSARIILWVMVAFFILAITWAAWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++ + F
Sbjct: 87  VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IINEDF 141

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 142 EEK-----NWTNSVRLDYSKLAFPPVLSDTQPEL---VDRQRDQYRQDLDNLRNQLSVLS 193

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 194 QQIKQKQQDLIEAEARVVNLRQSYNFAKKELDITEPLANEGVVPKIELLKLQRQLNDTRR 253

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 254 ELTSTELKIPVLKAAVREALLSRINAAQKFRTEQQDKLNQAQDKLSALTESAVGLEDKVN 313

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 314 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPELPA 373

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 374 IVKFTAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDKNLPIIP 430

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 431 GMTASVDIITGKRTVL 446


>gi|115525511|ref|YP_782422.1| HlyD family type I secretion membrane fusion protein
           [Rhodopseudomonas palustris BisA53]
 gi|115519458|gb|ABJ07442.1| type I secretion membrane fusion protein, HlyD family
           [Rhodopseudomonas palustris BisA53]
          Length = 433

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 89/431 (20%), Positives = 174/431 (40%), Gaps = 41/431 (9%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L +I   G+  W+    +  +V   G ++ + NV +++    GI+ + +V++G ++  G
Sbjct: 17  VLVMIVTFGIGGWAATAQLSGAVIGQGVVVVDSNVKKVQHATGGIVGELRVKDGDRVAAG 76

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             L+  +  +T     +    +  L   +  ++TE+  +D +     +LE+  +   E  
Sbjct: 77  DVLIRLDATQTLASATIVTKGLDELLARQARLETERDDIDQIVFPPALLERIRDGHSEA- 135

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ-- 196
               G+  +    +F+    S  RS +    + RS  L     E K  + +A     +  
Sbjct: 136 ----GRATAAERTLFDLRRQS--RSGQKAQLKERSAQLQE---EIKGYVGQAAAKQREVE 186

Query: 197 ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDE 250
              K+L  +++L+EKN V    L   ER   +   E   L   I + K  +  I EL   
Sbjct: 187 FIRKELDGVRSLWEKNLVPITRLTALERDSARLDGERSHLSGLIAQAKGKIAEI-ELQ-- 243

Query: 251 ANLEFANYLK-EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
             L+    L+ E+ +DL + +   ++   + T       +  I +P AG +      +  
Sbjct: 244 -TLQIDQDLRSEVGKDLIETRSKLSELSERKTAAVDQLYRIDIRAPQAGHVHQLAVHTVG 302

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                 + +M IVP +    +  K+ P+ I  V  G TA +RF  +        +    +
Sbjct: 303 GVIAPGEQIMLIVPEADALAVEVKIAPRDIDQVYMGQTAMMRFAAFD-------QKTTPE 355

Query: 370 IDPIISQQDNNLQTQE-----YY--EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
           +D  ++    +L T +     YY  +V LK  +L       +L  G P +V       T 
Sbjct: 356 VDGEVTMVSADLTTDQKSGTSYYTAKVALKQDELT-KLGRAKLMPGMPVDVFIKTAGRTA 414

Query: 423 AQEIIHPITDN 433
              ++ P+ D 
Sbjct: 415 LSYLMKPLRDQ 425


>gi|289625386|ref|ZP_06458340.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|330866876|gb|EGH01585.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 445

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 79/428 (18%), Positives = 160/428 (37%), Gaps = 37/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L++ G      W+ L P++  ++  G ++       ++S   G++ K  V  G  + +G
Sbjct: 29  MLAVAG--SFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQSVKEG 86

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLD 140
            PL   +  +        +  +++LR       ++L    ++ D L++  F +  E +  
Sbjct: 87  EPLFRLDQTQV-------EADVQSLRAQYRMAWASLARWQSERDNLDEVHFPA--ELIAA 137

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALL 192
             G+       +   G   ++ S +  L R +S          L    +    S L A  
Sbjct: 138 GQGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQA 197

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S +K L+ ++ L +   +  N L + +R + +    L +N  E   + + I E      
Sbjct: 198 DSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQGIVESRLRLQ 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQS 305
            +   Y KE+       +  +AD   K   LE+       + +   IL+P  G  V    
Sbjct: 258 QQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNLGV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + L++IVP      +  ++  + I  V       + F  +   R  +   
Sbjct: 311 HTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVSG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     Q  +    Q YY +   + D A    N + ++ G PAE+       +L  
Sbjct: 371 EVNLIS--ADQMQDEKTGQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTGERSLLN 428

Query: 425 EIIHPITD 432
            +  P+ D
Sbjct: 429 YLFKPLLD 436


>gi|62946411|ref|YP_227616.1| hemolysin secretion protein [Nostoc sp. PCC 7120]
 gi|17134513|dbj|BAB77072.1| hemolysin secretion protein [Nostoc sp. PCC 7120]
          Length = 500

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 63/113 (55%), Gaps = 5/113 (4%)

Query: 13  HPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             ++  R    +I+G+ +  I W+ +  IE SV ++G++  +  V EI++P +G++KK  
Sbjct: 15  QTSTWSRAIAWTIVGVSVFTIIWASVFKIEESVHATGKLEPQGAVKEIQAPVNGVVKKIL 74

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           V++G ++ +G  L++ E  +TT   +L   S+K  R      K +L+  N+ Y
Sbjct: 75  VKDGQRVKKGEILVSLE--QTTSEAEL--TSLKQSRAAQLQSKQSLELENDFY 123


>gi|316935448|ref|YP_004110430.1| HlyD family type I secretion membrane fusion protein
           [Rhodopseudomonas palustris DX-1]
 gi|315603162|gb|ADU45697.1| type I secretion membrane fusion protein, HlyD family
           [Rhodopseudomonas palustris DX-1]
          Length = 440

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 74/373 (19%), Positives = 152/373 (40%), Gaps = 47/373 (12%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H   +++++R   A L   TL+ +    G+  W+I  P+  +V +  +++ + NV  ++ 
Sbjct: 11  HGDPFRDIRRA--AGLGIATLVIVASTAGV--WAITAPLASAVIAPAQVVVDSNVRRVQH 66

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALD 118
           P  G++ +  V +G ++  G  L+  ++      + L +  +  L   R  + +E++  D
Sbjct: 67  PTGGVVAEIYVNDGDEVRAGDMLVRLDETMPRANLALIENQLNQLMVRRARLQSEQNGSD 126

Query: 119 FLNNKYDVLEKAFESREEQLLD-----FLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMR 172
            +    ++  +   +   +++D     F+ +  +        G  S  R  K ++   +R
Sbjct: 127 TVALPVEIAARRNVAAIAEMIDGETTLFVRRRDAIS------GQQSQLRERKAQIADEIR 180

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                   LE +    R  +   Q +L  ++ L+EKN V    L   ER   + T E  +
Sbjct: 181 G-------LEAQIVSKREQIRWIQTELEGVRQLYEKNLVPYARLTALEREASRLTGEEGQ 233

Query: 233 NIHEQKNMLRHINE-------LYDEANLEFANYLKEIS---RDLEQNQRTFADEMSKLTI 282
            I E       I E       L  +   E A  L+++     DL + +    D++ ++ +
Sbjct: 234 LIAEIARAKGRITETELQIIQLVQDQRREVATELRDVETKIADLGERRIAALDQLDRVVL 293

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                      +P  G +      +        + LM IVP   L  + AKV P+ I  +
Sbjct: 294 R----------APQDGLVHQKSVHTVGGVITAGEQLMLIVPKDSLV-VEAKVDPQMIDRL 342

Query: 343 KKGYTATVRFPHY 355
           + G +A +RF  +
Sbjct: 343 RVGQSARLRFSAF 355


>gi|83953020|ref|ZP_00961742.1| putative toxin secretion transmembrane protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83841988|gb|EAP81156.1| putative toxin secretion transmembrane protein [Sulfitobacter sp.
           NAS-14.1]
          Length = 418

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 84/428 (19%), Positives = 166/428 (38%), Gaps = 43/428 (10%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           L  W+    I  +V ++G+I        I++   G++ +  V+NG  +  G  L  F+  
Sbjct: 11  LGGWAATTQISGAVIATGQIDVAGKPKVIQTVDGGVLAELPVQNGDIVKAGQVLARFD-- 68

Query: 91  ETTDLIDLKKVSIK-----NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            T   IDL+    +      LR  ++ E+   +    ++D             +D   K 
Sbjct: 69  ATILQIDLRMARARLAEAAGLRARLEAERD--ESPAPRFDA------------IDLPAKI 114

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDLTMMKN 204
            +        G ++++ +       MR+   + L D+E +++ L   +S+ ++ L ++  
Sbjct: 115 GALDMTQAQAGQAAIFEARAQMRAGMRARMASDLADVETQATGLNGQISALEQQLAILTT 174

Query: 205 -------LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK-NMLRHINELYDEANLEFA 256
                  L EK    Q  L+Q    +  +   LR ++  ++ ++ R I++ +    LE  
Sbjct: 175 ELRSLTRLVEKGLAPQVRLSQ----LQSTRAGLRGDLAARRADLARLIHQRW-TLKLESL 229

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK----TILSPIAGTIVYNQSFSSSNYA 312
              +     +    R    E+ +LT+   TR+ +     I +P+ G +   ++ +     
Sbjct: 230 QADRRFQEQVALQLREVTAEVQELTLSILTRQAQLDRIAIRAPVDGMVHELRATTVGAVV 289

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                LM IVP         +V P+ I  V+    AT+    +      +    +  I P
Sbjct: 290 GAGATLMDIVPQQSKFEFEVQVDPRSINLVRYDQPATLVLTAFDPHTTPQLTGSVYSISP 349

Query: 373 IISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +     N     +Y VIL I  T+L     ++ L  G P E     K+ T+   +  PI
Sbjct: 350 QVVVDPRN--GDSFYRVILDIPRTELDRLPTSVRLVPGMPIEAFLKTKDRTVLSYLAEPI 407

Query: 431 TDNWPKIF 438
           +    + F
Sbjct: 408 SSQLRRGF 415


>gi|153833579|ref|ZP_01986246.1| secretion protein, HlyD family [Vibrio harveyi HY01]
 gi|148870106|gb|EDL69053.1| secretion protein, HlyD family [Vibrio harveyi HY01]
          Length = 463

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 90/457 (19%), Positives = 180/457 (39%), Gaps = 68/457 (14%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + ++  +  I W+    I+      G+++    +  +++   G++K+  
Sbjct: 27  NTPNSARLMLWVMVLFFVAAIGWASWAEIDKVTVGQGKVIPSSQIQVVQNLEGGLVKEIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G Q+ +G  LL  +D         ++  + NL   +    ++++ +    D  +  +
Sbjct: 87  VKEGQQVEKGQQLLLIDDTRFRSDFREREQQVANLTASVLQLSASINSVEVNRDFDDSNW 146

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL---KMKLT-RMRSIYLNRLD------- 180
           E                 + V +YG  +   +L   + +LT R ++ Y   LD       
Sbjct: 147 EK----------------NVVIDYGKLTFPPTLEENRPRLTQRQKAEYREDLDNLRNQIS 190

Query: 181 ---------------LENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-------QNDLNQ 218
                          ++ + S LR      +K+L + K L ++  V        Q  +N 
Sbjct: 191 VIDQQVKQKQQDLVEIQARVSNLRQSYRYAKKELDITKPLADEGVVPRIELLKLQRQVND 250

Query: 219 QERIVYKSTLE---LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
             R +  S L+   ++  I E  +ML  I+       L+F +  +E    L   Q   + 
Sbjct: 251 TRREMTSSELKIPVMKSGIRE--SMLNRID-----VALKFRSEQQE---KLNSTQDQLSA 300

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            +     LE    +  ++SP+ GTI      +     Q    +++IVP      + AK+ 
Sbjct: 301 LVESAVGLEDRVNRTVVVSPVTGTIKTLNVNTVGGVIQPGMDIVEIVPTEDTLLVEAKIA 360

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           PK I  ++    A V+F  Y   +    +  +E I    +Q +   +   +Y V ++   
Sbjct: 361 PKDIAFLRPDLHAIVKFTAYDFTKYGGLEGELEHISADTTQDE---EGNSFYIVRVRTEK 417

Query: 396 LAFS-DNNIELRNGFPAEV-LFTAKNTTLAQEIIHPI 430
            +F  D ++ +  G  A V + T K T L + ++ PI
Sbjct: 418 TSFGQDADLPIIPGMTASVDIITGKRTVL-EYLLKPI 453


>gi|92118524|ref|YP_578253.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
 gi|91801418|gb|ABE63793.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
          Length = 477

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 67/363 (18%), Positives = 151/363 (41%), Gaps = 45/363 (12%)

Query: 9   LKRNHPASLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           ++   P  + R+TL S++ +I  ++ W+ L  +E  V++ G+++     V ++   + +I
Sbjct: 51  IEERAPPRVARITLYSVVALILAMVAWASLSSVETIVTARGKLIAISPNVAVQPLETSVI 110

Query: 68  KKFQVENGSQILQGTPLLTFEDI---ETTDLIDLKKVSIKNLRCHIDTEKSALDFL---- 120
           ++ +V+ G  + +G PL T +       TD +  +  ++      + +E S  D++    
Sbjct: 111 REIKVKVGDIVSKGQPLATLDPTFSQADTDQLRTRVTALDAAIKRLQSELSGGDYVAADS 170

Query: 121 NNKYDVL-EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +N  ++L EK F  R          ++ T  + ++  I+S   +LK              
Sbjct: 171 SNSDELLQEKLFRQRR--------AFYETSLRNYDAQIASAQANLKAG------------ 210

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             E++  L+R  L + Q   TM  +L EK   S+ +L     +   + LE+  N+     
Sbjct: 211 --EDEEGLVRQRLETLQSIETMRSSLMEKKVGSRLNL----LLSKDARLEVENNLARVVG 264

Query: 240 MLRHINELYDEANLEFANYLKEISR-------DLEQNQRTFADEMSKLTILEKTREQKTI 292
                    ++A  +   +  +  R       D    Q + A+E+ K    E+ R+   +
Sbjct: 265 SEADYKHRVEKARADRQVFADDFRRTAYQELVDTRAKQNSAAEELKKA---ERRRQLTVM 321

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P+   ++   + +  +  ++++ L  +VP          V  + I  +  G    ++F
Sbjct: 322 AAPVDAVVLEIANRTVGSVVREAETLFVLVPRDTPLQAEVNVEGRDIGQISIGQPVRIKF 381

Query: 353 PHY 355
             +
Sbjct: 382 DAF 384


>gi|197337141|ref|YP_002158807.1| type I secretion adaptor protein [Vibrio fischeri MJ11]
 gi|197314393|gb|ACH63842.1| type I secretion adaptor protein [Vibrio fischeri MJ11]
          Length = 463

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 89/406 (21%), Positives = 167/406 (41%), Gaps = 60/406 (14%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P + K +  + ++     I W+    I+      G+++    +  +++   G++K+  
Sbjct: 27  NTPTNAKILLWVIVVFFCIAIGWASWAEIDKVTVGQGKVIPSSQLQVVQNLEGGLVKEML 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL-----NN---- 122
           V+ G Q+ +G  LL  +D         +K  + NL        +++D +     NN    
Sbjct: 87  VKEGDQVEKGQQLLLIDDTRFRSDFRERKKQLINLTASAQQLAASMDSILIQDINNRKRW 146

Query: 123 -----------KYD---VLEKAFESREEQLLDFLGKYHSTCSK--VFNYGISSVYRSLKM 166
                      K+D     E    +R  QL ++    ++  ++  VF+  +S   + L  
Sbjct: 147 KESVIIYTDKLKFDEEFAKENPIVTRR-QLAEYKADMNNLKNRIFVFDQQVSQKQQDLVE 205

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+R+              L+A  +  +K+L + K L ++  V + +L + +R V  +
Sbjct: 206 IKARVRN--------------LKASYNLARKELDITKPLADEGVVPRIELLKLQRQVNDT 251

Query: 227 TLELRENIHEQKNMLRHINELY---DEANLEFANYLKEISRDLEQNQR--TFADEMSKLT 281
             EL     +   +   I E      +A L+F +         EQ ++  T  D++S LT
Sbjct: 252 KRELTSTELKIPVLTSAIQETVLNRIDAALKFRS---------EQQEKLNTTQDKLSALT 302

Query: 282 ---ILEKTREQKTI-LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
              +  K R  +T+ LSP+ GTI      +     Q    L++IVP      I AK+ P+
Sbjct: 303 ESQVGLKDRVNRTVVLSPVTGTIKKIYINTVGGVIQPGMDLIEIVPTEDTLLIEAKIAPQ 362

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNL 381
            I  ++ G +A V+F  Y   R    K  +E I  D I  ++ N+ 
Sbjct: 363 DIAFLRPGLSAIVKFSAYDFTRYGGLKGTLEHISADTIQDEEGNSF 408


>gi|294084736|ref|YP_003551494.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664309|gb|ADE39410.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 484

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 77/410 (18%), Positives = 163/410 (39%), Gaps = 32/410 (7%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W+I   +   V + G I+   +V  ++S   G + K  V+ G+++ +G  L   ED +
Sbjct: 85  VVWAIYAEVNEQVRAEGIIVTPSDVQHVQSRLPGSLVKINVQLGAEVEKGDVLFRLEDED 144

Query: 92  T-----TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
                  + I+ +      +R  +  E S  D L    +++  + +   ++L  F  + +
Sbjct: 145 VLANFQDNEINYQAAYATEIR--LKAEISGADSLVFPEELILSSPDVVAQELQHFQSRKN 202

Query: 147 STCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALL-SSHQKDLTMM 202
           +  S+  V    + ++ R++  K    R I   + +L   + SLL  L+ + H+    ++
Sbjct: 203 AMRSRLEVLANAVETLERTILEKEAEAR-IATKQAELYAEELSLLEPLVKAGHEPQAILL 261

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
                    ++    Q    +  STL       +     R I  +        +N+  + 
Sbjct: 262 --------AARTKYQQAIGTIELSTLSANARRSDLAGKKREIESI-------VSNFKADA 306

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           +  L + Q       ++   LE       I +P++G +      +     Q    L+ IV
Sbjct: 307 AGKLAETQIKTMQYKARQDALEGKVRHADIRAPLSGIVSAVHVKTIGAVVQAGTVLVDIV 366

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P      +RA+V P+ +  V+ G  A +    Y   R      +++++    +Q +N + 
Sbjct: 367 PSESGYLVRAQVPPQNVAAVQPGQIARISLAAYDPSRYGVLMGVVQRVANNTTQPENQM- 425

Query: 383 TQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              +YE +++I  +  + + I  E+  G P  V       T+   I+ PI
Sbjct: 426 --PFYETMIEIPKIELTKSPIRPEITAGMPLTVDILGDKRTVMNYIMTPI 473


>gi|294010684|ref|YP_003544144.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292674014|dbj|BAI95532.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 395

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 122/280 (43%), Gaps = 32/280 (11%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           +M+L R R     R +LE  ++ LR  L+  ++ L M + L +  A ++ ++ Q +R   
Sbjct: 144 EMQLLRSR-----RENLEVATASLRQSLALTRRQLAMTEPLVDLGAANRVEIIQLQR--- 195

Query: 225 KSTLELREN-IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                 +EN +  + + LR  N+   +AN E+A    E+   ++Q      D+      L
Sbjct: 196 ------QENELQAKLDSLR--NQYVIDANAEYAKTRSELD-VIDQVIGGRRDQ------L 240

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            +TR    ++SP+ G +   +  +     Q    LM+IVP      + A+++P+ I  ++
Sbjct: 241 NRTR----LISPVRGIVKNLEVTTIGGVIQPGGSLMEIVPLEDELLVEARISPRDIAFIR 296

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDN 401
            G  ATV+   Y           +++I P   Q + N + Q YY V ++   + L   D 
Sbjct: 297 PGQPATVKITAYDPSIYGTLDGTVDRISPDTLQDEVN-REQVYYRVYVRTRHSSLRTKDG 355

Query: 402 NI-ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
               +  G  A V       T+ Q ++ PI      + ER
Sbjct: 356 REHAIMPGMVANVEIRTGRKTVLQYLLKPINKAKEAMRER 395


>gi|254472763|ref|ZP_05086162.1| rhizobiocin secretion protein RspE [Pseudovibrio sp. JE062]
 gi|211958227|gb|EEA93428.1| rhizobiocin secretion protein RspE [Pseudovibrio sp. JE062]
          Length = 438

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 91/438 (20%), Positives = 166/438 (37%), Gaps = 59/438 (13%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L+ + I+G  TWS +  I  +V +   I+ E +   ++    GII +  V+NG  +  G 
Sbjct: 25  LAALLILGGGTWSAVTEISGAVVAPATIVVETSTKTVQHRDGGIINQILVKNGDFVKAGD 84

Query: 83  PLLTFEDIET-------TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA----F 131
            +L  +D  T       T+ +D        L   I   K  + F       L +A     
Sbjct: 85  LVLRLDDTLTRSNLAVLTNQLDELYAQEARLTAEIQGRKE-ISFKKRAQSPLHRAHLMMI 143

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E  +  +++   K H +  +     I    + +   L R R      +DL N        
Sbjct: 144 EETQRNMMEARQKNHLSKREQLQTQIVQFEKQIG-GLIRQRDAKQTEVDLVNA------- 195

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLN--QQERIVYKSTL--------ELRENIHEQKNML 241
                 +L  +++L +K  V+++ +   Q+ER   +  L           E I E++ M+
Sbjct: 196 ------ELGGLESLRKKKLVTESRVMAFQRERSSLEGELGGIIAQIARSEEAISERRVMI 249

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
              +E     NLE     +    +LE+ +    DE+ +            I +P  G + 
Sbjct: 250 LQADEELRSNNLEQLQQTRAQISELEERRIAAQDELRR----------TEIRAPQNGKVF 299

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +        + +MKIVP      + AKV P  +  +     AT+R P +      
Sbjct: 300 DLAVHTIGGVVMGGEVVMKIVPEEDQLIVEAKVQPVDVDQIGPDQEATIRLPAFDKRTTP 359

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE------LRNGFPAEVLF 415
           + KA ++ I P + +      T  YY     + +LA  +N +E      L  G P E   
Sbjct: 360 ELKARLKTISPDLVEDPRTGST--YY-----LAELAIPENELERLDGKSLIPGMPVEAFI 412

Query: 416 TAKNTTLAQEIIHPITDN 433
             ++ ++   ++ P+ D 
Sbjct: 413 KTEDRSVLSYLVKPMMDQ 430


>gi|222080921|ref|YP_002540284.1| protein secretion protein [Agrobacterium radiobacter K84]
 gi|221725600|gb|ACM28689.1| protein secretion protein [Agrobacterium radiobacter K84]
          Length = 436

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 83/430 (19%), Positives = 175/430 (40%), Gaps = 31/430 (7%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           T++ ++G++G +  +    I  +V + G ++ +  V  ++    GI+   QV+NG ++  
Sbjct: 23  TIVLLVGVMGGLAATT--EISGAVIAPGTLVVDSYVKPVQHLKGGIVGDIQVKNGDRVDA 80

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           G  L+  +D +T+  + + +  +  L      +D E+     +    ++L +A E     
Sbjct: 81  GQLLIHLDDTQTSANLAIIRKRLDELFARTARLDAERDGAPAIAFPAELLSRAGE----- 135

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRLDLENKSSLLRALLSSHQ 196
             D + +  +   ++F+  ++S  +S K +L  R++ +      L  + +  R  +    
Sbjct: 136 --DEIARTIAGERRLFDDRLAS-RQSRKSQLGERIQQLSQEADGLVAQENGKRIEIDLIA 192

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR---ENIHEQKNMLR----HINELYD 249
           K+L  ++ LFEK  V    +   +R     T EL     +I + K  +      I ++ D
Sbjct: 193 KELASLQRLFEKGIVPAAKVYALQRESASLTGELGNLVSSIAQTKGKMTETELQITQVDD 252

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                  ++  E+S  L Q Q      + +L   E   ++  I +P AG I +    ++ 
Sbjct: 253 -------DHSAEVSEQLRQAQSDTGLFLERLIAAEDDLKRIDIRAPQAGIIDHLSVHAAG 305

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                 + +M+IVP         K++P+ I  V  G   T+R   +      +  A I K
Sbjct: 306 AVISPGETVMQIVPDQDALVAELKLSPQDIDQVIVGQPVTLRLSAFNQRDTPELNADITK 365

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           I   ++   ++     YY +   ++   +S    +    G P E        T+   +  
Sbjct: 366 ISAELTTDQHS--GASYYVLRAHVSKAEWSRLGKLTAVPGMPVEGFLQTGARTVLAYLTK 423

Query: 429 PITDNWPKIF 438
           P+ D   +  
Sbjct: 424 PMADQMARAL 433


>gi|134095130|ref|YP_001100205.1| putative Type I secretion membrane fusion protein, HlyD
           [Herminiimonas arsenicoxydans]
 gi|133739033|emb|CAL62081.1| Putative type I secretion membrane fusion protein, HlyD
           [Herminiimonas arsenicoxydans]
          Length = 456

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 76/412 (18%), Positives = 159/412 (38%), Gaps = 34/412 (8%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           L+ W+   PI++ V   G I+  D+   I+    GI+    V  G+ + +   L+T  D+
Sbjct: 55  LVIWAYFAPIDMVVRGQGRIVPSDHNQIIQHLEGGIVSAIVVREGAAVRKEQVLITIRDV 114

Query: 91  ETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +      ++ +  LR  +     E S    LN   D+L            D  G+   
Sbjct: 115 RASSDQGEGRIKLLGLRARVARLTAEASGAAQLNLPADMLA-----------DLTGQSEQ 163

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                    ++     L+ ++T+ R   LN      KS  L    +  Q+   ++  ++ 
Sbjct: 164 AAFAARQAKLNGELSILREQMTQ-RQAELNETISRQKS--LTDEYALVQQQYQLVHAMYL 220

Query: 208 KNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           K+A SQ  D+  Q R       ++R  ++   +M+  +     EA  +  + +     + 
Sbjct: 221 KSAASQLEDIQAQSR-----AQDVRSRLNAASSMIPRLRAAISEAQAKVTDGVSRFRAEA 275

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTI--VYNQSF--SSSNYAQQSQPLMKIV 322
             +  T   E+++L+   K+R  + + S +   +  V N+ F  +     +   P++++ 
Sbjct: 276 RADLTTAETELARLSEEMKSRNDRVLRSEVKAPMDGVVNRIFVNTVGGVVKPGDPILEMT 335

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P      + A + P     +  G  A V+   Y       F ++  ++  I +      +
Sbjct: 336 PIDDKVVVEANINPTDRAELAIGKPARVKVTAYD---YGVFGSMQGRVTEISADTVPEER 392

Query: 383 TQEYYEVILKIT----DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            + +Y V +++T     +  + N + L  G  A         T+ Q ++ PI
Sbjct: 393 GERHYRVKIEVTRDPEQIKSAGNGLPLMPGMTATADIVVGRRTVWQYLMSPI 444


>gi|114321315|ref|YP_742998.1| HlyD family type I secretion membrane fusion protein
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227709|gb|ABI57508.1| type I secretion membrane fusion protein, HlyD family
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 427

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 92/417 (22%), Positives = 167/417 (40%), Gaps = 71/417 (17%)

Query: 26  IGIIGL-----ITWSILLPIEISVSSSGE--ILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           IG++GL     + W+     E++  SSG+  ++       I+S   GI+++  V  G  +
Sbjct: 58  IGLVGLFVGAFVVWAYW--AELAEVSSGQATVVPSRGTQVIQSLEGGILQELLVAEGEMV 115

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             G PL   +   T    D+ +V        I   + AL         L    E R  + 
Sbjct: 116 EPGQPLARLDPTRTQ--ADMDEV--------IARYQGALARKARLEAELAGEGEIRFPEE 165

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           LD   +  +    +F                  R  +L R + + ++SL    L  +++ 
Sbjct: 166 LDLASEVVAAERTLFE----------------ARRAHLERTEQDIRTSLQ---LVGNERS 206

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           +T  + L    A S+ +L           L+LR +   + ++ R +N+L +E  +     
Sbjct: 207 IT--EELVRAGAASEVEL-----------LQLRRS---EADLRRELNQLRNEFRVRARQD 250

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP- 317
           L E   ++E  +       S L   E TR+++T+ SP+ G +   Q+ + +       P 
Sbjct: 251 LAETRTEVEALR-------SSLRGHEDTRQRQTLRSPVRGRV---QNLAVTTIGGVLAPN 300

Query: 318 --LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM+IVP      I A+++P+ I ++  G  A V+   Y        +  +  I P   
Sbjct: 301 GELMEIVPQDGELRIEARISPRDIAYIHPGQRAQVKITAYDYAIYGGLEGEVVNISPDTE 360

Query: 376 QQDNNLQTQEYYEVILKI-TDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHP 429
           + + N + + YY+V +   +D    +N     +  G  AEV       T+ Q II P
Sbjct: 361 RDEINPE-EVYYKVFIHTDSDELVVENGQRFPISPGMVAEVDIETGQRTVLQYIIKP 416


>gi|212709782|ref|ZP_03317910.1| hypothetical protein PROVALCAL_00830 [Providencia alcalifaciens DSM
           30120]
 gi|212687593|gb|EEB47121.1| hypothetical protein PROVALCAL_00830 [Providencia alcalifaciens DSM
           30120]
          Length = 448

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 93/419 (22%), Positives = 171/419 (40%), Gaps = 56/419 (13%)

Query: 14  PASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P+ L     +SI +GI   I WS    +++  ++ G+++       I++     +++  V
Sbjct: 31  PSYLAFTMAISISVGIFIAIAWSYFGKLDVQATTQGKLIVSGRTQTIQAFELSRLQQIHV 90

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           E+G Q+ QG PLL+ + +     +D   VS+   +    +E+     L N+  +      
Sbjct: 91  EDGQQVKQGDPLLSVKVLG----VDQDIVSLHYQKNFHASEEMIHHALLNQQQI---ETS 143

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR--- 189
            R  Q    L       +K+    I   Y +L  ++     + LNR++ + +   L+   
Sbjct: 144 PRYPQ----LSLTEQVQAKLSYQTIKKEYETLLNEIA--NEVQLNRVNYQARERELKDIN 197

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER-----------------IVYKSTLELRE 232
            L+ + +K L     L +K  +SQ +  +QER                 I+      LRE
Sbjct: 198 ILMHNIKKRLDAHTALNQKQLISQKEFLEQERELLLARKEKTAKQSELSILNSQHHALRE 257

Query: 233 NIHEQKNMLRHIN--ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              ++ N  +H    E Y +A  +F +  +E+ ++ E+NQ            LE  R   
Sbjct: 258 K-QDRINAQKHQEWYEKYQQAKFKFVSLEQELIKNQERNQ------------LEIIR--- 301

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
              +P+ GT+     ++     Q +Q LM IVP++ +     K+  K I  +++G  A V
Sbjct: 302 ---APVDGTVQQIAIYTLGAVLQPAQQLMVIVPNNHVQLAEVKILNKDIGFIQEGLKADV 358

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +   +   R    +  +  I    S QD NL      ++ L    L     +IEL  G 
Sbjct: 359 KIDAFPYTRYGTIEGELLSISR-DSTQDENLGLVYLAQIGLSSKQLLVEGEHIELTPGL 416


>gi|149912534|ref|ZP_01901068.1| type I secretion membrane fusion protein, HlyD family, putative
           [Roseobacter sp. AzwK-3b]
 gi|149812940|gb|EDM72766.1| type I secretion membrane fusion protein, HlyD family, putative
           [Roseobacter sp. AzwK-3b]
          Length = 437

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 87/410 (21%), Positives = 170/410 (41%), Gaps = 43/410 (10%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WS++  I  +V +SG +  E N   ++ P  G++ +  V+    + +G  L+  +  +  
Sbjct: 35  WSVMARISGAVVTSGTVTVESNRQVVQHPDGGVVGEILVDESDTVAKGEVLIRLDGRKQR 94

Query: 94  D---LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +++ +   I   +  +  E+   D +N    +L  A  S E   +  + K   T  
Sbjct: 95  SELAIVEGQLREIAARKARLVAERDGADTINYSDQLLTDAATSPE---VAAMVKGERTLF 151

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +     +    R L+ +  ++    +  +D +     LRAL    Q DL + + L ++  
Sbjct: 152 EARRDSLRQEARLLREQNKQIDQ-RITGIDAQ-----LRAL--ETQADL-VGEELRDQQR 202

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-------ELYDEANLEFANYLKEIS 263
           +  N L Q  R+         E   E+ N+L  I        EL  +A     + L+  +
Sbjct: 203 LLANQLTQVARV--------NELKREEANLLGQIGRLEAQMAELRGQAASNDISLLQLET 254

Query: 264 RDLEQNQRTFAD------EMSKLTI-LEKTREQKTILSPIAGTIVYN-QSFSSSNYAQQS 315
           R  E+   T  D      E+++  + LE T  +  I +P++G +VYN Q F+  +  + +
Sbjct: 255 RRREEAVSTLRDLQFREIELAERKLDLEDTLSRLDIRAPVSG-LVYNLQVFAEQSVVRPA 313

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            PL+ I+P  +   + A+V    +  +  G  A +RFP +   +  +    + K+   + 
Sbjct: 314 DPLLYIIPQDQALVVAARVESLNVNDIYVGQQAALRFPGFDQKKTPELFGQVTKVSADVV 373

Query: 376 QQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLF-TAKNTTLA 423
           Q +         E++   T+LA   D    L  G P E    T + + +A
Sbjct: 374 QDEATGMNYYAAEIMPYETELAKLGDER--LLPGMPVEAFIQTGERSPIA 421


>gi|146276171|ref|YP_001166330.1| HlyD family type I secretion membrane fusion protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145554412|gb|ABP69025.1| type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 433

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 91/439 (20%), Positives = 183/439 (41%), Gaps = 54/439 (12%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +TL  ++G  G  TWS    I  ++  SG+I    N   ++ P  G+++  +V  G+ + 
Sbjct: 18  LTLGVLVG--GFGTWSAFSSIAGAIVVSGQIEVAQNRQVVQHPDGGVVESIEVTEGASVR 75

Query: 80  QGTPLLTFEDIE-TTDL--IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA------ 130
            G  LL F+     T+L  ++ +   +   R  ++ E+   + L  + ++LE        
Sbjct: 76  AGDILLRFDGASLRTELAIVEGQLFEMLARRARLEAERDDAEALAFRPELLEAGKGRTAV 135

Query: 131 ----------FESREE---QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                     F +R E   Q +D LGK         N  I+ V   +    T++R I   
Sbjct: 136 AEQVEGQQRLFVARRESFAQQIDQLGKRKGQ----INSQIAGVDAQMAALGTQLRLI--- 188

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             +L ++  LL   L+   + L++ +    + A  Q +L   E    ++  E R  I E 
Sbjct: 189 EEELTDQQGLLAKGLAQASRVLSLQR----EQARLQGELG--ELAASRANAEGR--ITEL 240

Query: 238 K-NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
              +LR  +   +EA  +  ++     R+LE  +R  A       ++E+  ++  + +P+
Sbjct: 241 DIEILRLGSTRREEAITQLRDFGY---RELELAERRGA-------LIEQI-QRLDLRAPV 289

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G ++  Q  +     + + P++ ++P  +   I A+V P  +  V++G    + F  ++
Sbjct: 290 SGIVLGLQVTTPRAVIRPADPVLYLIPQDRPLVIAAQVPPIHVDEVREGQPVRLVFSAFS 349

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNNIELRNGFPAEVLF 415
                +    +  +    +  DN  QT  Y  E+ L+  ++   D+   L  G P E   
Sbjct: 350 SRTTPELAGHVSVLS-ADALTDNRTQTAFYRAEIALEPGEMEKLDDRT-LLPGMPVEAFI 407

Query: 416 TAKNTTLAQEIIHPITDNW 434
                +    ++ P TD +
Sbjct: 408 RTSERSPIAYLLKPFTDYF 426


>gi|153827806|ref|ZP_01980473.1| secretion protein, HlyD family [Vibrio cholerae 623-39]
 gi|148876651|gb|EDL74786.1| secretion protein, HlyD family [Vibrio cholerae 623-39]
          Length = 481

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 45  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 104

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 105 VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDENF 159

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 160 EEK-----NWANSVQLDYSKLAFPPVLSDSQPDL---VERQRDQYRQDLDNLRNQLSVLS 211

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 212 QQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRR 271

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 272 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 331

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 332 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPA 391

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 392 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDQNLPIIP 448

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 449 GMTASVDIITGKRTVL 464


>gi|83313156|ref|YP_423420.1| membrane-fusion protein [Magnetospirillum magneticum AMB-1]
 gi|82947997|dbj|BAE52861.1| Membrane-fusion protein [Magnetospirillum magneticum AMB-1]
          Length = 461

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 61/151 (40%), Gaps = 4/151 (2%)

Query: 287 REQKT-ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           RE ++ I SP+ G +  +   S    A+    LM IVP      + AKV P+ I H++ G
Sbjct: 284 RESRSEIRSPVRGIVKMSAIASVGQVARPGDTLMDIVPVDDALVVEAKVPPQDIGHLRPG 343

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--- 402
             A+VR   Y   R       +  +     ++     T  YY+V ++       D     
Sbjct: 344 LAASVRLSAYDQFRFGALPGHVVMVGADSFEETRGATTATYYKVQIRSDKTELLDGKGVA 403

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
             +R+G          + ++ + ++ P+  N
Sbjct: 404 WPVRSGMAGTASIVIGSKSILRMVLDPLLRN 434


>gi|325295502|ref|YP_004282016.1| type I secretion membrane fusion protein, HlyD family
           [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325065950|gb|ADY73957.1| type I secretion membrane fusion protein, HlyD family
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 457

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 110/252 (43%), Gaps = 23/252 (9%)

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           LL+S+ K++   + L ++  VS+    + + ++ER+      E+++   +   +L  I E
Sbjct: 206 LLNSYIKEIKEQEELVKEKLVSKIRLLDLMKEKERL----EAEIKDIKSKIPQVLSQIEE 261

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP-IAGTIVYNQS 305
           L  +  L+  NY  E++  L++     + E+    I  K + +KTI++   +G ++  + 
Sbjct: 262 LNHQKTLQIENYQNEVASKLDEVLSKLS-ELKPKVIYAKEKVKKTIITANTSGQVLGLKI 320

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY----ADIREK 361
            +     +    LM IVP     +I AKV P+    V KG    + FP +    A+I E 
Sbjct: 321 HAKGEVVKPGDTLMYIVPKKDEIFILAKVLPQDRDRVSKGQLVDLHFPAFLSIAANIVEG 380

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA---FSDNNIELRNGFPAEVLFTAK 418
           K   +    D +  Q   +    +YYE  + +TD            L  G PA      +
Sbjct: 381 KVTYVA--TDTLFDQATRH----DYYETHIVLTDKGKEQLKKYGFNLVPGMPAVAYIKVE 434

Query: 419 NTTLAQEIIHPI 430
             T  + ++ P+
Sbjct: 435 KVTPLEYVLQPV 446


>gi|254284701|ref|ZP_04959668.1| secretion protein, HlyD family [Vibrio cholerae AM-19226]
 gi|150425486|gb|EDN17262.1| secretion protein, HlyD family [Vibrio cholerae AM-19226]
          Length = 481

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 45  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 104

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 105 VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDENF 159

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 160 EEK-----NWTNSVQLDYSKLAFPPVLSDSQPDL---VERQRDQYRQDLDNLRNQLSVLS 211

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 212 QQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRR 271

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 272 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 331

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 332 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPA 391

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 392 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDQNLPIIP 448

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 449 GMTASVDIITGKRTVL 464


>gi|153216497|ref|ZP_01950498.1| secretion protein, HlyD family [Vibrio cholerae 1587]
 gi|124114245|gb|EAY33065.1| secretion protein, HlyD family [Vibrio cholerae 1587]
          Length = 481

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 45  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 104

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 105 VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDENF 159

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 160 EEK-----NWANSVQLDYSKLAFPPVLSDSQPDL---VERQRDQYRQDLDNLRNQLSVLS 211

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 212 QQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRR 271

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 272 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 331

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 332 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPA 391

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 392 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDQNLPIIP 448

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 449 GMTASVDIITGKRTVL 464


>gi|121585959|ref|ZP_01675752.1| secretion protein, HlyD family [Vibrio cholerae 2740-80]
 gi|121728744|ref|ZP_01681759.1| secretion protein, HlyD family [Vibrio cholerae V52]
 gi|147671735|ref|YP_001215003.1| HlyD family secretion protein [Vibrio cholerae O395]
 gi|153816676|ref|ZP_01969343.1| secretion protein, HlyD family [Vibrio cholerae NCTC 8457]
 gi|227812644|ref|YP_002812654.1| secretion protein, HlyD family [Vibrio cholerae M66-2]
 gi|298499841|ref|ZP_07009647.1| secretion protein [Vibrio cholerae MAK 757]
 gi|121549895|gb|EAX59915.1| secretion protein, HlyD family [Vibrio cholerae 2740-80]
 gi|121628966|gb|EAX61417.1| secretion protein, HlyD family [Vibrio cholerae V52]
 gi|126512695|gb|EAZ75289.1| secretion protein, HlyD family [Vibrio cholerae NCTC 8457]
 gi|146314118|gb|ABQ18658.1| secretion protein, HlyD family [Vibrio cholerae O395]
 gi|227011786|gb|ACP07997.1| secretion protein, HlyD family [Vibrio cholerae M66-2]
 gi|227015723|gb|ACP11932.1| secretion protein, HlyD family [Vibrio cholerae O395]
 gi|297541822|gb|EFH77873.1| secretion protein [Vibrio cholerae MAK 757]
          Length = 481

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 45  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 104

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 105 VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDENF 159

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 160 EEK-----NWANSVQLDYSKLAFPPVLSDSQPDL---VERQRDQYRQDLDNLRNQLSVLS 211

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 212 QQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRR 271

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 272 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 331

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 332 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPA 391

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 392 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDQNLPIIP 448

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 449 GMTASVDIITGKRTVL 464


>gi|330981414|gb|EGH79517.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 445

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 78/428 (18%), Positives = 159/428 (37%), Gaps = 35/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G      W+ L P++  ++  G ++       ++S   G++ K  V  G ++ +G
Sbjct: 27  ILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQRVKEG 86

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLD 140
            PL   +  +        +  +++LR       ++L    ++ D L++  F +  E +  
Sbjct: 87  EPLFRLDQTQV-------EADVQSLRAQYRMAWASLARWQSERDNLDEVRFPA--ELIAA 137

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALL 192
             G+       +   G   ++ S +  L R +S          L    +    S L A  
Sbjct: 138 GQGQDPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLMAQA 197

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S +K L+ ++ L +   +  N L + +R + +    L +N  E   + + I E      
Sbjct: 198 DSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQGIVESRLRLQ 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQS 305
            +   Y KE+       +  +AD   K   LE+       + +   IL+P  G  V    
Sbjct: 258 QQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNLGV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + L++IVP      +  ++  + I  V       + F  +   R  +   
Sbjct: 311 HTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVSG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     Q  +    Q YY +   +   A    N + ++ G PAE+       +L  
Sbjct: 371 EVSLIS--ADQMQDEKTGQPYYVLRTSVGGAALEKLNGLVIKPGMPAEMFVRTGERSLLN 428

Query: 425 EIIHPITD 432
            +  P+ D
Sbjct: 429 YLFKPLLD 436


>gi|190895177|ref|YP_001985470.1| putative toxin secretion protein [Rhizobium etli CIAT 652]
 gi|190700838|gb|ACE94920.1| putative toxin secretion protein [Rhizobium etli CIAT 652]
          Length = 436

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 85/439 (19%), Positives = 170/439 (38%), Gaps = 42/439 (9%)

Query: 19  RMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R  L  +I I G    W+    +  +V + G ++ + N+  ++ P  GI+ +  V  G Q
Sbjct: 18  RFGLCGVISIFGGFAVWAGTTTLASAVVAPGTLVVDGNIKPVQHPNGGIVTEILVREG-Q 76

Query: 78  ILQGTPLLTFEDIETTDL-IDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVL---EKA 130
           ++    +L   D     +  ++ KV+I  L   +  +  E   L       DV+   E A
Sbjct: 77  VVHSDEVLIRLDATAAKMNYEILKVAINQLYARKARLSAEAMGLQ------DVIVPSELA 130

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLR 189
                +++ D +     +  ++F           + +L    + Y  ++  LE + +   
Sbjct: 131 ARIAPDKIDDVM----ESERRIFQSR-RDAREGQRQQLGEQITQYQEQIKGLETQQAAKS 185

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             +   +K+L   + L+ K  VS N LN  +R   +   E  + I    +    I+E+  
Sbjct: 186 QEIGLIEKELEGTRRLYSKGLVSLNRLNSLDRSEARIQGENGQLIASAASAKARISEI-- 243

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK----TILSPIAGTIVYNQS 305
              ++     +E+   +E  QR     + +L   E T + +     I +P AGT+     
Sbjct: 244 --RIQLLQIDQELRSQVETEQRDVQSRLDELIEKEVTAQDQLKRVEIRAPTAGTVHDLNI 301

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            S       ++ L++IVP      +  ++ P  I  V  G +A +RF  +          
Sbjct: 302 HSIGAVVTPAETLLQIVPSQSELVVSVRLAPSMIDQVAVGQSAFLRFSAFDRNTTPDLNG 361

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD------NNIELRNGFPAEVLFTAKN 419
            + ++         +L+T      +    D+A         N+++L  G P E      +
Sbjct: 362 HVVRVSA-------DLETDAKTNTVFYKCDIAIPADEVAKLNSLKLLPGMPVESFIRGND 414

Query: 420 TTLAQEIIHPITDNWPKIF 438
            ++A     PI D+  ++F
Sbjct: 415 RSVASYFTKPIRDHMARVF 433


>gi|254473618|ref|ZP_05087014.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
 gi|211957330|gb|EEA92534.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
          Length = 436

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 80/430 (18%), Positives = 173/430 (40%), Gaps = 36/430 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +L   H A   R+ + +  GI+ L+  WS    +E      G ++    +  +++P  GI
Sbjct: 12  HLPEFHSAKHSRILIFTCAGILLLLFVWSAFAHVEEVTRGDGRVIPSRQMQIVQAPERGI 71

Query: 67  IKKFQVENGSQILQGTPLLTFEDIE-TTDLIDL--KKVSIKNLRCHIDTEKS----ALDF 119
           + +     G  + QG  L+  ++    + L +L  KK +++     +  E       LD 
Sbjct: 72  VSEVMFYEGEIVEQGAVLVKLDNTGFASQLGELQQKKYALQARLARLMAEARQANLQLDL 131

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            N   D+   AF  RE ++        +    V     S   + LK              
Sbjct: 132 SNTPSDI--AAFLQRELEVYKARKDQLNAEVAVLRSQFSQKEQDLK-------------- 175

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHE 236
            LE ++ +L + L+   ++L + + L+++  + + +   L +Q   ++     L  ++  
Sbjct: 176 QLEAEAQMLGSNLTIIARELEINQQLYKRGVLPEIEFLRLKRQYTTMHGEQQMLEASLAS 235

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            ++  +   +    A   FA+  +    DL   +   A    +L   E    +  +++P+
Sbjct: 236 ARSAKQEAMQRVVSAQTAFASKAQS---DLVATKAELAVIEERLRGAEDRVHRSALVAPV 292

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G I      +     Q  +PL++IVP      I A++ P+ +  +  G   +V+   Y 
Sbjct: 293 RGVINKLNVSTIGAVVQAGEPLVEIVPLEDTLLIAAQIQPQHVAFLHPGQDVSVKVTAYD 352

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEV- 413
                  + ++E+I P  S+ +     Q +++VI++     L   +N + +  G  A + 
Sbjct: 353 YSIYGGLEGVLERISPDTSEDERG---QAFFKVIVRTRQNHLGSEENPLPITPGMTASID 409

Query: 414 LFTAKNTTLA 423
           + T + + L+
Sbjct: 410 ILTGEKSVLS 419


>gi|238750867|ref|ZP_04612365.1| HlyD family secretion protein [Yersinia rohdei ATCC 43380]
 gi|238711011|gb|EEQ03231.1| HlyD family secretion protein [Yersinia rohdei ATCC 43380]
          Length = 446

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/418 (19%), Positives = 160/418 (38%), Gaps = 23/418 (5%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G IG + W+ L P++  ++  G I+  +N   ++    G IK+  V  G ++ +G
Sbjct: 36  VLVLGGFIGSLLWAGLAPLDKGIAVMGHIIVAENRKVVQPLQGGRIKQLHVAEGDEVAEG 95

Query: 82  TPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEK---SALDFLNNKYDVLEKAFESRE 135
             L+T +D       D +  + +S       +  E+    A+ F    +   E+    R 
Sbjct: 96  QLLITLDDTAIRSHRDNLQHQHLSALAQEARLTAEQHDLPAIIFPAELHQYPEQHLVERN 155

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSS 194
             L   L ++           +S V R L  ++TR  S    RLD LE      +     
Sbjct: 156 IVLQQQLFQHRRQAQ------LSEVARLLA-QITRHES----RLDGLETMRGHNQHQFDL 204

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q+ L  ++ L +    +Q  L   ER        + +N  E   + + I+E     +  
Sbjct: 205 FQRQLQGVQLLAKNGHAAQTQLLDMERQSISLRAGIEKNNSEILELHKQISETEQHISQR 264

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              +  E    L + Q+   D   +L + E       I+SP +G ++     +       
Sbjct: 265 REQFKSENREQLAKAQQNTQDLGQRLEMAEFELNNTRIISPASGAVIALAQHTIGGVVSS 324

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + LM++VP+ +     A++    I  V  G    + F  +      + +  + ++    
Sbjct: 325 GETLMELVPNGQPLLAEAQLPVSLIDKVVVGLPVDLNFSAFNQSNTPRLQGSVLRVGADR 384

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            Q    L+   YY + + I +   +   + +R G   ++       +L   +  P+TD
Sbjct: 385 IQHPQTLEP--YYPLTVAIDN---TQTQLPIRPGMSVDIFIRTGERSLLNYLFKPLTD 437


>gi|307309390|ref|ZP_07589049.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
 gi|306900120|gb|EFN30739.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
          Length = 439

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 79/433 (18%), Positives = 176/433 (40%), Gaps = 33/433 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +++L++  + G+  W+    +  ++ + G ++ +DNV +++    GI+ +  V+ G ++ 
Sbjct: 23  VSVLALALVAGVGGWAATTELSSAIVAGGVVIVDDNVKKVQHLTGGIVGELLVKEGDRVE 82

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            G  L+  +       + + + ++      R  +  E+           +   +FE  EE
Sbjct: 83  AGQVLIRLDGTTVRANLAIIESTLAQFYARRARLQAER-----------IGAASFEI-EE 130

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-----DLENKSSLLRAL 191
            L +F+     T +     G   ++ S +  L+ M+    +R      ++E  +  L A+
Sbjct: 131 DLAEFI---PGTAAAKLIEGEQRLFASRRSALSGMKGQLDSRKAQLADEVEGLTVQLNAI 187

Query: 192 ---LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH-EQKNMLRHINEL 247
              L    ++LT + +LF +  V    +   +R   ++ LE     H   +   R  +  
Sbjct: 188 EEALKLIAEELTGVDSLFGQGLVPMQRVTTLKR--QRAELEGGRGRHIAARAQARGKSSE 245

Query: 248 YDEANLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            D   L+   +   EIS++L   +   A+   + T       +  I +P++G I      
Sbjct: 246 IDLQILQLDEDRRSEISKELTDVEAKIAEYEERRTAATDQLRRLDITAPLSGRIYQLAIH 305

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           + +      + LM +VP ++   + AKV    I  ++ G +  +RF  +      + +A 
Sbjct: 306 TVNGVINPGETLMLVVPEAEDLTVEAKVATHDIDQIRVGQSVEIRFSAFNQRTTPEVEAE 365

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  + P +   +       YY + ++    + +    + L  G PAEV     + T+   
Sbjct: 366 VVTVAPDLVTDERT--GASYYPLRIRPKAESLAKLKGLSLYPGMPAEVFIKIADRTVISY 423

Query: 426 IIHPITDNWPKIF 438
           +  P+TD     F
Sbjct: 424 LTKPLTDQMRHAF 436


>gi|254487853|ref|ZP_05101058.1| type I secretion membrane fusion protein, HlyD [Roseobacter sp.
           GAI101]
 gi|214044722|gb|EEB85360.1| type I secretion membrane fusion protein, HlyD [Roseobacter sp.
           GAI101]
          Length = 396

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 33/259 (12%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM----LRHI 244
           R LL + Q D            VS+++  Q+         EL EN+HE+K +    +   
Sbjct: 144 RGLLKARQADF-----------VSRSEGAQRVLTQAAKERELLENMHEKKIVSLIEVTRA 192

Query: 245 NELYDEANLEFANYLKEI--SRDLEQNQRTFADEMSKLTILEKTREQKT-------ILSP 295
            +++ +A ++    L EI  S DLE+ Q  ++D + +L  L++T +  T       ++SP
Sbjct: 193 RKIHADARIK----LDEITTSTDLERAQE-YSDVLKELATLKQTLKSSTDQLNRTVLVSP 247

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +      +     +  + +++I+P  +  ++ A+V P+ I  V+ G  ATV+   Y
Sbjct: 248 LRGIVNTLSVTTIGGVVRPGEEILQIIPLDEELFVEARVKPENIAGVRPGQEATVKLSAY 307

Query: 356 ADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPA 411
                   K  +  I  D     +        +Y+V L++    L     ++ +R G  A
Sbjct: 308 DYTIYGTLKGTVTLISADTFKDDRSRAPDGDPHYKVTLQVDTAHLTPRQASLRIRPGMQA 367

Query: 412 EVLFTAKNTTLAQEIIHPI 430
            V     + T+ Q ++ P+
Sbjct: 368 SVELHTGSKTILQYLLKPL 386


>gi|325982694|ref|YP_004295096.1| type I secretion membrane fusion protein, HlyD family [Nitrosomonas
           sp. AL212]
 gi|325532213|gb|ADZ26934.1| type I secretion membrane fusion protein, HlyD family [Nitrosomonas
           sp. AL212]
          Length = 451

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/417 (17%), Positives = 154/417 (36%), Gaps = 23/417 (5%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           + G  G + WS + P++  V   G +    ++  ++    GII    ++ G  +  G  L
Sbjct: 40  LAGFCGFVLWSSIAPLDKGVPVMGTVTVASHLQAVQHQTGGIIDDILIKEGDHVKLGQIL 99

Query: 85  LTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           +   D++     ++ +  +   + +   +  E+   + +    ++L    + R    +  
Sbjct: 100 VRMNDVQIKAQAEITRSQLYAARAIEARLLAERDGANEITFPKELLGSENDPRVTNNISI 159

Query: 142 LGKYHSTCSKVFNYGISSVYRS---LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
             +  S       + I+++  S   LK++L  + +       + +K   L+ L    ++ 
Sbjct: 160 QNQLFSARKLALQHEIAAIGESTAGLKLQLRGLEA------SMASKKQQLKFL----EEQ 209

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  +++L     V  N + + ER   + T ++   I +     R I EL          Y
Sbjct: 210 LFSLRDLAMDGFVPHNRVLELERTYTQLTGDISSGIGDIGRTQRQITELEQRRIHRLQEY 269

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            KE+ + L   QR      ++L   +       + +P+ G +V    F+          L
Sbjct: 270 QKEVRQALSDVQREAEALSNRLIGQDFELANVEVKAPVDGIVVGMNVFTKGGVISPGFKL 329

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQ 376
           M IVP   +  I  +V    I  +       + F      +      I+ ++  D +I +
Sbjct: 330 MDIVPSDDMLIITGQVPVHLIDKIHVDLPVDLIFSALNQKKTPNIPGIVTQVSADRLIDE 389

Query: 377 QDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
                    +Y +  K+T        + ++R G P E+       +L   +  PI D
Sbjct: 390 HSGF----PFYSIKAKVTPEGMKQLTDEQIRAGMPVEIFIKTGERSLMNYLFKPILD 442


>gi|77458906|ref|YP_348412.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           fluorescens Pf0-1]
 gi|77382909|gb|ABA74422.1| putative HlyD family secretion protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 449

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 76/422 (18%), Positives = 165/422 (39%), Gaps = 28/422 (6%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L+++G     TW+ L P++  +   G ++       ++S  SG++ +  V  G  + QG
Sbjct: 36  ILALVGAGSFFTWAALAPLDQGIPVQGTVVVSGKRKAVQSMSSGVVSRILVREGEIVKQG 95

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA---------FE 132
            PL   +  +           +++L+       ++L     + D L++           +
Sbjct: 96  QPLFRLDQTQVA-------ADVQSLQAQYRMAWASLARWQAERDNLKQVTFPAELSDNAD 148

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            R   +L+   +  S+  + F+   +++  S++    ++  +   R DL  ++  L    
Sbjct: 149 PRLALVLEGQRQLFSSRREAFSREQAALRASIEGATAQLAGMRRARTDLNAQADSL---- 204

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              Q+ L+ ++ L +   + +N L + +R + +   +L EN  E   + + I E   +  
Sbjct: 205 ---QQQLSNLQPLADNGYIPRNRLMEYQRQLSQVQQQLAENTGESGRVEQGILESRLKLQ 261

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                Y KE+   L   Q        +LT      +   IL+   G  V     +     
Sbjct: 262 QHGEEYQKEVRTQLADAQLKSVTLSEQLTSAGFDLQHSEILATADGVAVNLGVHTEGAVV 321

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +Q + L++IVP      +   +    I  V       + F  +    + K   +  ++  
Sbjct: 322 RQGETLLEIVPQGTRLEVEGHLPINLIDKVGTHLPVDILFTAF---NQSKTPRVPGEVSL 378

Query: 373 IISQQDNNLQTQ-EYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           I + Q  + +T   YY +   ++D A    N + ++ G PAE+       +L   +  P+
Sbjct: 379 ISADQMVDEKTGVPYYVLRSSVSDQAMEKLNGLVIKPGMPAEMFVRTGERSLLNYLFKPL 438

Query: 431 TD 432
            D
Sbjct: 439 LD 440


>gi|90417983|ref|ZP_01225895.1| possible secretion membrane fusion protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337655|gb|EAS51306.1| possible secretion membrane fusion protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 445

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 89/445 (20%), Positives = 170/445 (38%), Gaps = 65/445 (14%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL+   I+G   W+    +  ++ + G++  +  V +I+    GI+    V NG  +  G
Sbjct: 35  LLATALIVGCGGWAAQASLSGAIIAQGKVTVKKQVKQIQHRDGGIVGAILVANGDVVEAG 94

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVL-EKAFESREEQ 137
             L+  ++ +T   + +    +  L   +  +  E+   D      DVL E+ FE+    
Sbjct: 95  EVLIRLDETQTKAELGVISSQLSELIGRQARLRAERDGAD------DVLFEQVFET---- 144

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                    +  +     G   ++               NR   + ++  L++ +  + +
Sbjct: 145 ---------AGATAAIAEGERRLFSD-------------NRATRDAQADQLQSQIEQYGE 182

Query: 198 DLTMMKNLFEKNAVSQN----DLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEAN 252
            +  +++  E NA+ +     DL +   +V +  +E  R  I E+   L  I+ L  E  
Sbjct: 183 QVRGLESQRESNALERQMIAEDLARLAPLVKRKLVEGTRTRIMERD--LAKIDGLKGEIE 240

Query: 253 LEFANYLKEISR------DLEQNQRTFAD-----------EMSKLTILEKTREQKTIL-S 294
              A    +IS       +L+Q  RT A            E+S+  +  K R  +  L +
Sbjct: 241 ANIARVKGQISEARMKIIELDQQTRTDAQRELRDVDARVAELSERIVAAKDRLSRMDLRA 300

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           PIAG +   +  +        + +M IVP  +   + AK++P  I  V  G    +RF  
Sbjct: 301 PIAGFVNDLKVHTVDGVISPGETVMGIVPEGEELVVEAKLSPVDIDQVSVGQDVKLRFSA 360

Query: 355 YADIREKKFKAIIEKIDPIISQQD-NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +    ++    I  ++D + +    +    Q YY   + ITD         L  G P EV
Sbjct: 361 F---NQRTTPEIDGRVDIVGAAATLDPASGQTYYLSTIAITDEDRGLGKQILVPGMPVEV 417

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIF 438
                  +    ++ P TD   + F
Sbjct: 418 FLKTGERSALSYLVKPFTDQMMRSF 442


>gi|298387357|ref|ZP_06996910.1| ABC transport system [Bacteroides sp. 1_1_14]
 gi|298260026|gb|EFI02897.1| ABC transport system [Bacteroides sp. 1_1_14]
          Length = 304

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 92/197 (46%), Gaps = 28/197 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R DL  + +  +  +++ Q++   ++NL    A +Q  L+  +  V   TL  
Sbjct: 84  MKSVESQRPDLAKQIAATKQQITTAQREKKRVENLLAAGAANQKQLDDWDAQV---TLLQ 140

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R+ I ++ ++++  N L ++ N         +S  + Q      D+++K           
Sbjct: 141 RQLIAQESSLMKSTNSLTEQGN--------SVSIQVAQ----VEDQLNKC---------- 178

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I SPI GT++   +  +   A   +PL K+    ++ Y+RA +T +Q+  VK G   TV
Sbjct: 179 HIQSPIEGTVLAKYA-EAGELASVGKPLFKVGEVDRM-YLRAYITSEQLSQVKLGDKVTV 236

Query: 351 RFPHYADIREKKFKAII 367
            +  Y +  +K +  ++
Sbjct: 237 -YSDYGNSEQKAYPGVV 252


>gi|119505003|ref|ZP_01627080.1| HlyD family secretion protein [marine gamma proteobacterium
           HTCC2080]
 gi|119459289|gb|EAW40387.1| HlyD family secretion protein [marine gamma proteobacterium
           HTCC2080]
          Length = 455

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 95/448 (21%), Positives = 167/448 (37%), Gaps = 86/448 (19%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
            +L + G  G   W+ L PIE +V   G +  E N   ++    GI+ +  V NG  + +
Sbjct: 45  VILVVFG--GFGAWAGLAPIESAVHGVGTVQVEGNRKVVQHLEGGIVTEILVSNGDFVTK 102

Query: 81  GTPLLTFEDIETTD--------------LID-----------------LKKVSIKNLRCH 109
           G  LL  ++ +                 L+D                 LKK+  + +   
Sbjct: 103 GQALLRMDETQVKAELSIISGRFWAKRALVDRLLAERDDKKDIAFTPWLKKLGDERVLVA 162

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           I  EK+  +         ++ FE R  QL D +  + +                    LT
Sbjct: 163 IGNEKALFNARRTDLAGEKELFEQRIAQLRDQVKGFEAV-------------------LT 203

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL- 228
             RS+  +   L ++++ L  LL     D   ++ L    A    +++ Q   +  + + 
Sbjct: 204 AKRSVAAS---LGSEATELEELLEEGYVDKQRIRELERSQASILGEVSDQVARISAAKIA 260

Query: 229 --ELRENIHEQKNML--RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
             E+R  I +       R +N L  E         +EI  DLEQ     +   +++ +  
Sbjct: 261 IEEMRLQILQLGKGFQTRVVNALTQE---------QEILFDLEQQYHAVSARAARMVVR- 310

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
                    +P AGTI+  +S +        Q +M IVP +    I  K++P  I  +  
Sbjct: 311 ---------APNAGTILALESNTIGEVFGPGQQIMAIVPDTDSLLIDTKLSPMDIDRISI 361

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNN 402
           G  A VRF  + D        +    D ++ + +       Y++  +++   D+A    N
Sbjct: 362 GQEAEVRFSVFKDAYSITGVLVKLSADSLLDESNG----APYFQGKVRLLEGDIALLGAN 417

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +L  G PAEVL      TL   +  P+
Sbjct: 418 -KLVPGMPAEVLVKTGERTLLGYLSSPL 444


>gi|77458084|ref|YP_347589.1| secretion protein HlyD [Pseudomonas fluorescens Pf0-1]
 gi|77382087|gb|ABA73600.1| putative periplasmic protein [Pseudomonas fluorescens Pf0-1]
          Length = 390

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 20/176 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLP--------------IEISVSSSGEILNED 54
           +KR  PA    +  L +I +I +  W +L P              IE SV++ G  L   
Sbjct: 1   MKRPRPARRALLIALCLIPVIAIAAWQVLPPGRDKFTTVQVSRGDIESSVTALG-TLQPR 59

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V++ +  SG I+K  VE G  + +G  L+  +       +D  + SI+NL+  +  ++
Sbjct: 60  RYVDVGAQASGQIRKIHVEVGDVVKEGQLLVEIDPATQKAKLDASQFSIENLKAQLQEQQ 119

Query: 115 SALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLK 165
           +  +    KY     L     +REE +     +  +T +++  F   I     SL+
Sbjct: 120 AQHELARQKYQRQQNLAAGGATREEDVQTARAELKATQARIDMFQAQIRQAQASLR 175


>gi|113475076|ref|YP_721137.1| chromosome segregation ATPase-like protein [Trichodesmium
          erythraeum IMS101]
 gi|110166124|gb|ABG50664.1| Chromosome segregation ATPase-like protein [Trichodesmium
          erythraeum IMS101]
          Length = 726

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 14 PASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
          PA L R+ L  I I     I W+    I+ +V ++G++  +D  +++++P SG + +  V
Sbjct: 18 PAILSRLFLWMIMIMTSSAIIWAYFAEIDQAVPATGKLELKDGSIDVQAPTSGNVVRLHV 77

Query: 73 ENGSQILQGTPLLTF 87
          ENG ++ +  PLLTF
Sbjct: 78 ENGDRVEKNQPLLTF 92


>gi|313682017|ref|YP_004059755.1| type i secretion membrane fusion protein, hlyd family
           [Sulfuricurvum kujiense DSM 16994]
 gi|313154877|gb|ADR33555.1| type I secretion membrane fusion protein, HlyD family
           [Sulfuricurvum kujiense DSM 16994]
          Length = 448

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 88/431 (20%), Positives = 187/431 (43%), Gaps = 38/431 (8%)

Query: 15  ASLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           A   R+ L S++ ++ G + W  +  ++      G+++   ++  I++   GI+++ +V 
Sbjct: 30  AKSSRIFLWSVLTMVFGTLIWMSIAEVDEITKGDGKVIPSSHLQVIQNLEGGIVEEIRVN 89

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLE-K 129
            G  + +G  L+   D++     +  ++  + L+     +  E S  +F  +K +  +  
Sbjct: 90  EGDHVKKGDLLIRLSDVKPKSEFEGNRIQYEGLKAKQYRLLAEASMGEFSVDKAERQKLD 149

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F  +EE+       +H+  S + +  ++ +   +  ++T +        D ++K  LL 
Sbjct: 150 GFIQQEEE------AFHTNRSLLISK-LNILNEQINQRITELS-------DAKSKVKLLT 195

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN---MLRH-IN 245
                  K+ ++ +++ +K   S++D  + +R   +ST+E  + + E KN    L H I 
Sbjct: 196 QAYEVIAKEESLSQSMLQKGVESKSDNWKLQR--ERSTIE--QQLEEAKNSVPRLEHAIA 251

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           EL ++   E  +Y  +  ++L QN        +    L    ++  I+SP+ G  +  Q 
Sbjct: 252 ELKEKMIQEKIDYQNKAKQELSQNDAELGRIHASSVPLSDQVDRSKIISPVTG--IMKQM 309

Query: 306 F--SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           F  +     +    + +IVP      I  K+ P  I  +  G  A V+F  Y D     +
Sbjct: 310 FINTVGGVVRPGMDIAEIVPTEDSLLIETKIKPADIAFLHPGQKAIVKFSAY-DF--SIY 366

Query: 364 KAIIEKIDPIISQQDNNLQTQE-YYEVILKITDLAFSD---NNIELRNGFPAEVLFTAKN 419
             ++ ++  I S    + Q QE YY V +KI   +  +   + + +  G  A V      
Sbjct: 367 GGMVGEVYQISSDTIVDQQKQESYYLVKVKINQKSAINSKLSQVTIMPGMTANVDIVTGK 426

Query: 420 TTLAQEIIHPI 430
            T+ Q ++ PI
Sbjct: 427 KTILQYLMKPI 437


>gi|330889695|gb|EGH22356.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 445

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 79/428 (18%), Positives = 158/428 (36%), Gaps = 35/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G      W+ L P++  ++  G ++       ++S   G++ K  V  G    +G
Sbjct: 27  ILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQSGKEG 86

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLD 140
            PL   +  +        +  +++LR       ++L    ++ D L++  F +  E +  
Sbjct: 87  EPLFRLDQTQV-------EADVQSLRAQYRMAWASLARWQSERDNLDEVHFPA--ELIAA 137

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALL 192
             G+       +   G   ++ S +  L R +S          L    +    S L A  
Sbjct: 138 GQGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQA 197

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S +K L+ ++ L +   +  N L + +R + +    L +N  E   + + I E      
Sbjct: 198 DSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQGIVESRLRLQ 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQS 305
            +   Y KE+       +  +AD   K   LE+       + +   IL+P  G  V    
Sbjct: 258 QQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNLGV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + L++IVP      +  ++  + I  V       + F  +   R  +   
Sbjct: 311 HTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVSG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     Q  +    Q YY +   + D A    N + ++ G PAE+       +L  
Sbjct: 371 EVNLIS--ADQMQDEKTGQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTGERSLLN 428

Query: 425 EIIHPITD 432
            +  P+ D
Sbjct: 429 YLFKPLLD 436


>gi|322832021|ref|YP_004212048.1| type I secretion membrane fusion protein, HlyD family [Rahnella sp.
           Y9602]
 gi|321167222|gb|ADW72921.1| type I secretion membrane fusion protein, HlyD family [Rahnella sp.
           Y9602]
          Length = 389

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 101/240 (42%), Gaps = 34/240 (14%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + R R +YL+R   +N+   +  L  S +    ++ M + L  K A  Q ++ + +R   
Sbjct: 135 VARERQLYLSRK--QNRDETVTNLQQSLRLVNDEINMTQPLVAKGAAGQVEVIRLKR--- 189

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               ELR  I              D+A  ++A       R  E+  +  AD  ++L +L 
Sbjct: 190 -QASELRGKI--------------DDATNQYA------VRAREEQVKNNADLDAELQVLA 228

Query: 285 KTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
              +Q T   + SP+ G +   Q  +     Q    LM+IVP      I  ++ P+ I +
Sbjct: 229 GKEDQVTRSELYSPVHGIVKDIQVSTVGGVLQPGGKLMEIVPIEDQLLIETRINPRDIAY 288

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           ++ G  ATV+   Y           +E + P  + QD   + Q YY V ++ TD AF  N
Sbjct: 289 IRPGLPATVKISAYDSSIYGDLDGKVEGVSP-DTLQDEVKRDQYYYRVYVR-TDKAFLTN 346


>gi|186685935|ref|YP_001869131.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186468387|gb|ACC84188.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 512

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 87/409 (21%), Positives = 175/409 (42%), Gaps = 75/409 (18%)

Query: 19  RMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R    +IIG+    + W+ +  I+ S+ ++G++  +  V EI++P  G++ +  V++G +
Sbjct: 33  RAIAWTIIGVSTFTVIWASVFQIDESIHATGKLEPQGAVKEIQAPVHGVVNEILVKDGQR 92

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY-----------DV 126
           + +G  L+T E  +T+   +L   S+K  R      K +L+  N+ Y            V
Sbjct: 93  VKKGETLITLE--KTSSEAEL--TSLKQSRAAQLLAKQSLEQENDFYRRQLQGSISLQQV 148

Query: 127 LEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++    + +  L FL K  +     ++++   ++    + +  LTR + + L    +E 
Sbjct: 149 AQQTALLKIKPELAFLTKSRAAIIAENQLYRTQLNGA--TAESPLTREQQLRLRNRQIEL 206

Query: 184 KSSLLRA-----------------------LLSSHQKDLTMMKNLFEKNAVSQND-LNQQ 219
           +S L  A                       LL+ +Q+ L   + L ++ A+SQ   L QQ
Sbjct: 207 ESRLATANLETGQTQQQFFQTQAQLTSAKELLTINQQILRRFEPLAQQGAISQVQYLKQQ 266

Query: 220 ERIVYKSTLELRENIHEQK---------NMLRHINELYDEANL--------EFANYLKEI 262
           + +  K    +R N  +Q+           LR+   +  E  L        + A    ++
Sbjct: 267 QDVSTKQAEVIRLNREQQRLQLAIAQSNEKLRNTAAVSQEDLLAKITDNDKKIAEIDSQL 326

Query: 263 SRDLEQNQRTF-------ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           ++ +  NQ+          +  SKL   ++T + + I +P+ GT+   ++ ++      S
Sbjct: 327 TKVIVDNQKRLYEINGQIGEIESKLIQAQQTLKYQKITAPVDGTVFELKAKTAGFVINSS 386

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR-----FPHYADIR 359
           +PL+K+VP   L      +T + I  V++     VR     F  Y DI+
Sbjct: 387 EPLLKLVPSDNLVA-NVYITNRDIGFVRERQQVDVRIDSFPFQEYGDIK 434


>gi|71278693|ref|YP_270974.1| HlyD family type I secretion membrane fusion protein [Colwellia
           psychrerythraea 34H]
 gi|71144433|gb|AAZ24906.1| type I secretion membrane fusion protein, HlyD family [Colwellia
           psychrerythraea 34H]
          Length = 403

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 69/336 (20%), Positives = 129/336 (38%), Gaps = 62/336 (18%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           +IG++  + W+    ++     +GE++    V  I+S   G+I    V+ G  + +G  +
Sbjct: 36  LIGLVVFVLWASNFRLDQVARGTGEVIASSRVQIIQSVDGGVISNLYVKEGDSVTKGQVI 95

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            T +       +      +  LR      ++  + L NK  V         + LL F   
Sbjct: 96  ATLDTTRIGAAVKEVDARLSALRAKATRLRA--EILGNKTLVFA-------DDLLRF--- 143

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                                        I + R   E KS+ L   L + +K + + + 
Sbjct: 144 --------------------------PEQIKVERALFEQKSTTLAEELKALKKGVDLARE 177

Query: 205 LFE--KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             E  K   +  D+N+ E I    +L    N  E K +L   N   ++A  E A    EI
Sbjct: 178 ESELIKKLSASGDVNRTEVIRAARSL----NDSEAK-LLNRKNTYLEDAGAELAKAEDEI 232

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQ--KTILSPIAGTIVYNQSFSS-SNYAQQSQPLM 319
           +++++              +L + ++Q   +I   +   IV N   ++     +  + LM
Sbjct: 233 AQNVQ--------------VLTQRKQQLEDSIFKALLPGIVKNVRVTTIGGVLRAGEELM 278

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           +I+P      + AK++P  I  V+KG  AT+RF  +
Sbjct: 279 QIIPVGDELILEAKISPADIAQVRKGLNATIRFDPF 314


>gi|16265039|ref|NP_437831.1| HlyD family protein secretion protein [Sinorhizobium meliloti 1021]
 gi|2281441|gb|AAB64092.1| PrsE [Sinorhizobium meliloti]
 gi|15141178|emb|CAC49691.1| PrsE [Sinorhizobium meliloti 1021]
          Length = 439

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 79/433 (18%), Positives = 175/433 (40%), Gaps = 33/433 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +++L++  + G+  W+    +  ++ + G ++ +DNV +++    GI+ +  V+ G ++ 
Sbjct: 23  VSVLALALVAGVGGWAATTELSSAIVAGGVVIVDDNVKKVQHLTGGIVGELLVKEGDRVE 82

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            G  L+  +       + + + ++      R  +  E+               +FE  EE
Sbjct: 83  AGQVLIRLDGTTVRANLAIIESTLAQFYARRARLQAERMG-----------AASFEI-EE 130

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-----DLENKSSLLRAL 191
            L +F+     T +     G   ++ S +  L+ M+    +R      ++E  +  L A+
Sbjct: 131 DLAEFI---PGTAAAKLIEGEQRLFASRRSALSGMKGQLDSRKAQLADEVEGLTVQLNAI 187

Query: 192 ---LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH-EQKNMLRHINEL 247
              L    ++LT + +LF +  V    +   +R   ++ LE     H   +   R  +  
Sbjct: 188 EEALKLIAEELTGVDSLFGQGLVPMQRVTTLKR--QRAELEGGRGRHIAARAQARGKSSE 245

Query: 248 YDEANLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            D   L+   +   EIS++L   +   A+   + T       +  I +P++G I      
Sbjct: 246 IDLQILQLDEDRRSEISKELTDVEAKIAEYEERRTAATDQLRRLDITAPLSGRIYQLAIH 305

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           + +      + LM +VP ++   + AKV    I  ++ G +  +RF  +      + +A 
Sbjct: 306 TVNGVINPGETLMLVVPEAEDLTVEAKVATHDIDQIRVGQSVEIRFSAFNQRTTPEVEAE 365

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  + P +   +       YY + ++    + +    + L  G PAEV     + T+   
Sbjct: 366 VVTVAPDLVTDERT--GASYYPLRIRPKAESLAKLKGLSLYPGMPAEVFIKIADRTVISY 423

Query: 426 IIHPITDNWPKIF 438
           +  P+TD     F
Sbjct: 424 LTKPLTDQMRHAF 436


>gi|118602294|ref|YP_903509.1| secretion protein HlyD family protein [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
 gi|118567233|gb|ABL02038.1| secretion protein HlyD family protein [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
          Length = 389

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 81/418 (19%), Positives = 162/418 (38%), Gaps = 68/418 (16%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           G I  I W+ L  I+ +V   G+++   +   I+    G++ K  V  G  + Q   L T
Sbjct: 23  GFIAFILWASLFDIDETVRCQGKVVANGSSQIIQVADGGVLSKLLVSEGEHVQQRQLLAT 82

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK--AFESREEQLLDFLGK 144
            E        D  + S   +R  +   KSAL   N   ++LEK   F+   +   DF+  
Sbjct: 83  LEK-------DRAQASYYEIRSQVAYLKSALARANA--EILEKPIVFDELTKNYPDFM-- 131

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMMK 203
                                      +++Y+ +   L  + S+L   L+ + ++  + +
Sbjct: 132 ------------------------NAQKALYVQKKRSLNQEVSMLEEGLAMNIEEWEITQ 167

Query: 204 NLFEKNAVSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           +L +   VSQ + L  +++++Y      +  + + KN                  Y ++ 
Sbjct: 168 SLEKTGDVSQLEVLRAKQKVLY-----FKRKVVDTKN-----------------KYYEKT 205

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           S ++E+ +   A  + KL   +   E   I SP++G +   +  +     +  + LM+I 
Sbjct: 206 SSEIEKLEGELAKNLYKLKKQKSVLEYTNIYSPVSGIVKELKVTTVGGVLRAGEQLMEIS 265

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNN 380
           P      + AK+ P  I  +K G    ++   +        K  +  I  D ++ +  + 
Sbjct: 266 PSQGGVILEAKINPVDIGRLKLGMPVMIKLDAFDYTIFGGLKGTLNYISSDTLLDKDPSG 325

Query: 381 LQTQEYYEVILKITDLAFSDN----NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            Q   +Y+V +KI    + DN     I ++ G    +       +L   +I PI+  +
Sbjct: 326 RQIT-FYQVNVKIEGPEYEDNVKSKVINVKLGMSGTIDVKVGKRSLFTYLIKPISRGF 382


>gi|29421535|gb|AAO73509.1| RsaE [Caulobacter vibrioides]
          Length = 435

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 80/427 (18%), Positives = 159/427 (37%), Gaps = 50/427 (11%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           +GL+ W+   P++ +V ++G I  E N   I+    G+++K  V  G ++  G  L  FE
Sbjct: 29  VGLLGWAAFAPLDSAVIANGVISAEGNKT-IQHLEGGMLRKILVREGEKVRAGQVL--FE 85

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
                               H     SA+    N++  L K  E R     D        
Sbjct: 86  -------------------LHPTQANSAVGITKNQFLAL-KGHEGRLLAERDQRPSISLP 125

Query: 149 CSKVFNYGISSVYRSL---KMKLTRMRSIYLNRLDL---------------ENKSSLLRA 190
              V       V R++   + + +  R     ++DL               E ++  L+ 
Sbjct: 126 GRPVSQRADPMVTRAIADEQAQFSERRQTISGQVDLMNAQRAQYQSEIEGIERQTQGLKD 185

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L   + +L  ++ + +K  V +  L   ER     +  +     ++   ++   E   +
Sbjct: 186 QLGFIKDELGDLRKISDKGLVPRPRLLALEREEASLSGSIGRLTADRAKAVQGAGETQLK 245

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                  + +E+S+ + + +   A+   +  +    + +  ++SP+ GT    + F+   
Sbjct: 246 IRQIKQQFFEEVSQSISETRVKLAEVTEREVVASDAQRRINVVSPVNGTAQNLRFFTEGA 305

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  +PL+ I P  +   I+A   P  + +V  G    VR P +     +K   +  KI
Sbjct: 306 VVRPGEPLVDIAPDDEAFVIQAHFAPTDVDNVHAGMVTEVRLPAF---HSRKIPILNGKI 362

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN----GFPAEVLFTAKNTTLAQEI 426
           + I   + ++   +  Y   L I  +       E R     G PA+V+      T+ Q +
Sbjct: 363 ESISRDRLSDPDGKTVY--FLGIVRVDIKQLPKEFRTKITAGMPAQVVVPTGERTVLQYL 420

Query: 427 IHPITDN 433
             P+ D 
Sbjct: 421 FSPLRDT 427


>gi|124267065|ref|YP_001021069.1| HlyD family secretion protein [Methylibium petroleiphilum PM1]
 gi|124259840|gb|ABM94834.1| HlyD family secretion protein [Methylibium petroleiphilum PM1]
          Length = 475

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 25/243 (10%)

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L   Q++L   + L    AVS+ D+ + ER + K     R ++ +    +  ++    EA
Sbjct: 230 LDLSQQELAKTRPLLASGAVSEVDILRLERDLSK----YRGDVEQAGAQIARVSAAVGEA 285

Query: 252 NLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTR-------EQKTILSPIAGTIVYN 303
             +      EI+ R+  + ++  AD + ++  L + R       ++  + SP+ G +   
Sbjct: 286 QRKIQE--TEIAFRN--EARKELADVLGRMNALTEGRVALSDKVDKAQVKSPVRGRVQRL 341

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            + +     Q  + ++++VP      + A+V P+ I  +  G  ATV+F  Y        
Sbjct: 342 LANTVGGVVQPGRDIVEVVPLDDALVLEARVFPRDIGFIHPGQQATVKFTAYDFSIYGGL 401

Query: 364 KAIIEKIDP--IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNT 420
            A +E I P  +I ++ N      +Y V ++ T LA   + + +  G  AEV + T K T
Sbjct: 402 DATVENISPDTVIDEKGNA-----FYVVRVR-TRLAQLGDKLPIIPGMTAEVDILTGKKT 455

Query: 421 TLA 423
            ++
Sbjct: 456 VMS 458


>gi|300717606|ref|YP_003742409.1| type I secretion membrane protein [Erwinia billingiae Eb661]
 gi|299063442|emb|CAX60562.1| Putative type I secretion membrane protein [Erwinia billingiae
           Eb661]
          Length = 389

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 18/209 (8%)

Query: 191 LLSSHQKDLT-MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL-- 247
           L  S +++L+  +KNL +   + Q++L     +V K      E I     + R +++L  
Sbjct: 141 LYQSRRRNLSETVKNLEDAKKLVQDELRMTAPLVAKGAAGEVEVIR----LRRQVSDLQG 196

Query: 248 -YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ---KTILSPIAGTIVYN 303
             DEA  ++A       R  E+  +  AD  ++L ++    +Q    T+ SP+ G +   
Sbjct: 197 KIDEAKNDYA------VRAREEQVKNNADLDAQLQVVTGKEDQLTRATLYSPVRGIVKDI 250

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           Q  +     Q    LM+IVP      I  ++ P+ I +++ G  ATV+   Y        
Sbjct: 251 QVTTVGGVLQPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKVTAYDSSIYGDL 310

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILK 392
              +E + P  + QD   + Q YY V ++
Sbjct: 311 PGEVETVSP-DTIQDEVKRDQYYYRVYVR 338


>gi|114561621|ref|YP_749134.1| type I secretion membrane fusion protein, HlyD family protein
           [Shewanella frigidimarina NCIMB 400]
 gi|114332914|gb|ABI70296.1| type I secretion membrane fusion protein, HlyD family protein
           [Shewanella frigidimarina NCIMB 400]
          Length = 460

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 72/366 (19%), Positives = 151/366 (41%), Gaps = 18/366 (4%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++    W+    ++   S +G+++    +  I+S   GI+++  V+ G  + +G PL   
Sbjct: 39  MVCFFIWAYFSELDQVTSGTGKVIPSSQIQIIQSLDGGILQEIYVQEGGIVTKGQPLARI 98

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL---NNKYDVLEKAFESRE-----EQLL 139
           +D       D ++  +  L+ +I   ++ LD +   +   D  ++   +++     + ++
Sbjct: 99  DDTRFRSDFDQQEQEVFGLQTNIIRMRTELDSIIISDMSSDWRQQVKITKQNLVFPQTII 158

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D   +      + ++  + ++   L++ + +++       +L ++ S L        ++L
Sbjct: 159 DEEPELVKRQQEEYSIRLDNLSNQLEILVRQIQQRQQEIEELASRISTLTTSYQLVSREL 218

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLEFANY 258
            + + L  K  V + +L + ER V     EL     +   +LR  +    DEA L+    
Sbjct: 219 ELTRPLARKGIVPEVELLKLERTVNDIQGEL-----QSVRLLRPKVKASMDEAILKRREA 273

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKT----ILSPIAGTIVYNQSFSSSNYAQQ 314
           +   + DL         ++S++   +K    K     I SP+ GTI      +     Q 
Sbjct: 274 VFVYATDLRAQLNEMQTKLSRMNQAQKGAFDKVSKAVIASPVIGTIKKINFNTLGGVVQP 333

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + +M+IVP      I  K+TPK I  +  G  A V+   Y   R    K  +E I    
Sbjct: 334 GEEIMEIVPSEDKLLIETKITPKDIAFLHPGLPAIVKVTAYDFTRYGGLKGTVEHISADT 393

Query: 375 SQQDNN 380
           SQ +  
Sbjct: 394 SQDEEG 399


>gi|153801266|ref|ZP_01955852.1| secretion protein, HlyD family [Vibrio cholerae MZO-3]
 gi|124123181|gb|EAY41924.1| secretion protein, HlyD family [Vibrio cholerae MZO-3]
          Length = 481

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 45  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 104

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 105 VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDENF 159

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 160 EEK-----NWANSVQLDYSKLAFPPVLSDSQPDL---VERQRDQYRQDLDNLRNQLSVLS 211

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 212 QQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRR 271

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 272 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 331

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 332 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPELPA 391

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 392 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDQNLPIIP 448

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 449 GMTASVDIITGKRTVL 464


>gi|194335532|ref|YP_002017326.1| secretion protein HlyD family protein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308009|gb|ACF42709.1| secretion protein HlyD family protein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 393

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 94/239 (39%), Gaps = 15/239 (6%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+++   + LF    VS   LN+Q   +     E    +++Q  +   I E       + 
Sbjct: 155 QQNMQNQRQLFLSRRVSLQILNKQLEAMTSLAREGYAPLNQQHELELKIAEFKSSTASQL 214

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A    E+  D E+  R  A+E++             + SP +G +V  Q  +     Q  
Sbjct: 215 AQVQLEVEADGEKT-RALAEELAD----------TEVRSPASGQVVGLQVQTVGAVIQPG 263

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPI 373
           Q +M IVP  +   I  KV P  I  +  G    V F  +A   +   + ++E +  D +
Sbjct: 264 QKIMDIVPLHESLLIDTKVAPHLIDSIHNGLPVDVSFSSFAHSPQLVVEGVVESLSKDIV 323

Query: 374 ISQQDNNL-QTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              Q N +     YY   + +T    +     E++ G P +V+      +L   ++ P+
Sbjct: 324 TDPQVNPMTPGASYYLARVSVTPEGMTSLGRREMQPGMPVQVVIKTGERSLLTYLVDPL 382


>gi|170741501|ref|YP_001770156.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium sp. 4-46]
 gi|168195775|gb|ACA17722.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium sp. 4-46]
          Length = 447

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 71/420 (16%), Positives = 165/420 (39%), Gaps = 34/420 (8%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    I  +V + G+++ E +V +++ P  G++ +  V++G  +  G  L+  ++ +T 
Sbjct: 44  WATFTQISGAVIAPGQLVVESDVKKVQHPTGGVVGELLVQDGDPVKAGDVLIRLDETQTR 103

Query: 94  DLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLDFLGKYHSTC 149
             +D+   ++  L   R   + E+     +    D+L++A  ++   +L+D         
Sbjct: 104 AGLDILLKALDELSARRARNEAERDGAGGITFPADLLQRAKADATAARLID-------GE 156

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +K+F   +++          R+  +      L  ++S     ++    +L  ++ L+ KN
Sbjct: 157 TKLFTSRVNAREGQKAQLRERLAQLQQEIGGLTQQASAKEREIAFIGSELKGVRELYAKN 216

Query: 210 AVSQNDLNQQERIVYK----------STLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            V    LN  ER   +          ST   R  + E +  +  I++          +  
Sbjct: 217 LVQLPRLNALERDATRLEGERGQLLASTAAQRGKMSEIELQILQIDQ----------DMR 266

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E+ ++L + +  +++ + K    E   ++  + +P  G +      +       ++P M
Sbjct: 267 TEVGKELAEIRSKWSELVEKRVAAEDQLKRVELRAPQDGIVHQMTVHTIGGLVTPNEPAM 326

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IVP S    +  K+ P  I +V+    A +RF  +      +    + ++   ++    
Sbjct: 327 LIVPSSDRLALEVKIQPHDIDNVRFDQKAVLRFSAFNQRTTPEIDGQVTRVSADVTTDPK 386

Query: 380 NLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                 +Y   + + D   +    + L  G P E        T+   +  P+TD   K +
Sbjct: 387 T--GASFYTARISVPDDQRARLGAVRLVPGMPVESFIQTGERTVLSYLTKPLTDQITKAW 444


>gi|330447360|ref|ZP_08311009.1| type I secretion membrane fusion, HlyD family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328491551|dbj|GAA05506.1| type I secretion membrane fusion, HlyD family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 460

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 77/365 (21%), Positives = 140/365 (38%), Gaps = 24/365 (6%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           I+    WS    +++    +G+++    V  I+S   GI++   V  G  + +G PL   
Sbjct: 39  IVCFFVWSYFASLDVVTRGTGKVIPSSQVQIIQSLDGGILQNMYVTEGMAVKKGQPLARI 98

Query: 88  EDIETTDLIDLKKVSIKNLRCHI---------------DTEKSALDFLNNKYDVLEKAFE 132
           +D      +  ++    +LR +I                T+      +++K  V      
Sbjct: 99  DDTRVRSDLAQQEDEEGSLRANILRLQQEIADIHLNPTSTDWHTQIIVDDKPLVYPSDLF 158

Query: 133 SREEQLLDFL-GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             E  LL     +YH   S+  N  +S + + +  K     SI      L+N  +L+   
Sbjct: 159 KDEPVLLKRQQAEYHGRLSE-LNNQLSILAKQIVQKEQENESINSQIRTLKNSLNLVL-- 215

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                K+L M + + +K  VS+ +L + +R +     EL +   +Q   L   +E   + 
Sbjct: 216 -----KELRMTQPMAQKGIVSEVELLKLQRQINDIKGELSKLYLQQPKTLAARDEAILKR 270

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                NY KE    L + +   +        ++   ++  I+SP+ GTI      +    
Sbjct: 271 REAALNYNKEARAKLNELESRLSRLTEAQVGVQDKVDRTVIISPVNGTIKTIHINTIGGV 330

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +    +++IVP      I AK+ PK I  +  G  A V+   Y   R       +E I 
Sbjct: 331 VKPGADIIEIVPTEDQLVIEAKIKPKDIAFLHPGLPAVVKVTAYNFTRYGGLDGTLEHIS 390

Query: 372 PIISQ 376
              SQ
Sbjct: 391 ADTSQ 395


>gi|154251459|ref|YP_001412283.1| HlyD family type I secretion membrane fusion protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155409|gb|ABS62626.1| type I secretion membrane fusion protein, HlyD family [Parvibaculum
           lavamentivorans DS-1]
          Length = 439

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 80/423 (18%), Positives = 164/423 (38%), Gaps = 68/423 (16%)

Query: 14  PASLKRMTLLSIIGIIG-----LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           P    +  +L+++G++      L+ WS    I+++ S  G ++   ++  +++   GI++
Sbjct: 16  PVRGPKQAVLTLLGVVAGLFFFLLLWSAFAHIDVTASGEGAVVPSSHIQVVQNLEGGILR 75

Query: 69  KFQVENGSQILQGTPLLTFEDIET-----TDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           K  V  G ++ +G  +   ++         DL   + +     R   +   + L F  + 
Sbjct: 76  KVLVREGDRVSEGDVVAQIDNTGALSSYREDLSTFRAMQASAARLSAEASGAPLAFPVDL 135

Query: 124 YDVLEKA---------FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
            D  E A         +ESR   L D +  +     +          R   M+ T     
Sbjct: 136 LDAEESAALIAAETSLYESRMSGLTDAVAVFERQEEQA---------RETIMEAT----- 181

Query: 175 YLNRLD-LENKSSLLRA---LLSSHQKD--LTMMKNLFEKNAVSQND--LNQQERIVYKS 226
              R+  LE+K   L A   L+S   +D  +++++ L  +  +++ D  L++    +  +
Sbjct: 182 --ERIGHLEDKRRSLAAEHSLVSRQVRDGLMSVVEKLKLERMLAETDEALSKARGDIRAA 239

Query: 227 TLELRE---NIHEQKN-MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            +EL+E    I E+++  +    E    AN E A            +QR  A        
Sbjct: 240 EIELQELASRIAERRSTFVSEAREQLGRANAEVAAL----------SQRLIAHRDRVGR- 288

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                  + + +P  G +    + +S    +    +M+IVP     +I A++ P  I  +
Sbjct: 289 -------RDVRAPANGIVKRVATLTSGAVIEPGGTIMEIVPLDDTLFIEARMAPADIAFI 341

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             G  A VR   Y D     + A+  +++ + +      +   Y+ V + +   A  D  
Sbjct: 342 HAGQEAKVRITAY-DF--SVYGALPGRVERVGADTQMTQEGAHYFPVTVSVDHAALEDRQ 398

Query: 403 IEL 405
            EL
Sbjct: 399 AEL 401


>gi|145298658|ref|YP_001141499.1| HlyD family secretion protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851430|gb|ABO89751.1| secretion protein, HlyD family [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 472

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 75/359 (20%), Positives = 149/359 (41%), Gaps = 61/359 (16%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           I W+    ++      G+++    +  I++   GI+K+  V  G  + +G PLL  +D  
Sbjct: 55  IVWAAWAELDEVTVGQGKVIPSRQLQVIQNLEGGIVKEIFVREGDIVEEGQPLLRIDDTR 114

Query: 92  --------TTDLIDLKKVSIKNLRCHIDT-----------------EKSALDFLNNKYDV 126
                     +L+ LK   I  LR  I +                 +K  +DF +   +V
Sbjct: 115 FRSDFREREEELVTLKG-GIARLRAEIKSVVVKTGPNLSWREQVLIDKQPIDFPDGFENV 173

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             + + +RE+ + D   + +S  ++++  G     + ++ K   +       ++L  K  
Sbjct: 174 FAE-YAAREKSVQD--ERLNSLNNQLYILG-----QQIEQKEQEL-------IELNAKIR 218

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN---IHEQKNMLRH 243
            +   +   +++L + + L ++  V Q +L + ER V +   EL  N   I +  ++LR 
Sbjct: 219 TVGRSVDLARQELNISRPLAKEGIVPQVELIKLERQVNEMQGELESNRLIIPKLNSVLRE 278

Query: 244 INELYDEANLEFA-------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                ++  L+F        N L+   R L + Q    D +          ++ ++++P+
Sbjct: 279 SISKRNDIALKFRADSQTELNELQGKLRQLSEGQVGLRDRV----------DRTSVIAPL 328

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            GTI   +  +     Q    LM+IVP      + AKV+PK I  ++ G  A V+   Y
Sbjct: 329 KGTIKKLKINTLGGVVQPGMDLMEIVPLEDTLLVEAKVSPKDIAFLRPGLDAVVKITAY 387


>gi|149187823|ref|ZP_01866119.1| secretion protein, HlyD family [Vibrio shilonii AK1]
 gi|148838219|gb|EDL55160.1| secretion protein, HlyD family [Vibrio shilonii AK1]
          Length = 463

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 88/435 (20%), Positives = 178/435 (40%), Gaps = 39/435 (8%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + ++  I    W+    I+      G+++    V  I++   G++K+  
Sbjct: 27  NTPTSARIMLWVMVLFFISAAVWASWAEIDKVTVGQGKVIPSSQVQVIQNLEGGLVKEIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +G  LL  +D         ++  + NL  ++    ++L  +    DV +K  
Sbjct: 87  VKEGDTVKKGQQLLLIDDTRFRSDYREREQQVLNLTANVLQLSASLTSVVINEDVKDK-- 144

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRA 190
           E ++   LDF           F        ++L   + R R+ Y   L+ L N+ S++  
Sbjct: 145 EWQKSVTLDF-------NKLAFPPTFEEENKAL---VARQRAEYRQDLNKLRNELSVIDQ 194

Query: 191 LLSSHQKDLTMMK----NLFEKNAVSQNDLN-----QQERIVYK-STLELRENIHEQKNM 240
            +   Q+DL  ++    NL E   +++++LN       E +V K   L+L+  +++ +  
Sbjct: 195 QVRQKQQDLIEIQARVHNLREGYNLARDELNITKPLADEGVVPKVELLKLQRQVNDTRRE 254

Query: 241 LRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTREQ 289
           L         +     E+ L   +  ++   + ++      D++S +T     LE    +
Sbjct: 255 LTSTELKVPALKSAIQESMLSRIDIAQKFRSEQQEKLNQAQDKLSSMTESAVGLEDRVNR 314

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             ++SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++    A 
Sbjct: 315 TVVVSPVNGTVKTLNVNTVGGVIQPGMDIVEIVPTEDTLLVEAKIAPQDIAFLRPDLHAI 374

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNG 408
           V+F  Y   +       +E I    +Q +   +   +Y V ++     F  D  + +  G
Sbjct: 375 VKFSAYDFTKYGGLDGTLEHISADTTQDE---EGNSFYIVRVRTDKTNFGHDEQLPIIPG 431

Query: 409 FPAEV-LFTAKNTTL 422
             A V + T K T L
Sbjct: 432 MTASVDIITGKRTVL 446


>gi|254224657|ref|ZP_04918273.1| secretion protein, HlyD family [Vibrio cholerae V51]
 gi|125622720|gb|EAZ51038.1| secretion protein, HlyD family [Vibrio cholerae V51]
          Length = 481

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 87/436 (19%), Positives = 173/436 (39%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 45  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 104

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 105 VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDENF 159

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 160 EEK-----NWTNSVQLDYSKLAFPPVLSDSQPDL---VERQRDQYRQDLDNLRNQLSVLS 211

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             +   Q+DL      + NL +    ++ +L+  E +  +  +   E +  Q+ +     
Sbjct: 212 QQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTHR 271

Query: 246 ELYD-------------EANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
           EL               EA L   N  ++   + +       D++S LT     LE    
Sbjct: 272 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 331

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 332 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPA 391

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 392 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDQNLPIIP 448

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 449 GMTASVDIITGKRTVL 464


>gi|260769132|ref|ZP_05878065.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio furnissii CIP 102972]
 gi|260614470|gb|EEX39656.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio furnissii CIP 102972]
          Length = 463

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 85/434 (19%), Positives = 177/434 (40%), Gaps = 37/434 (8%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P+S + M  + ++  I    W+    I+      G+++    +  +++   G++K+  
Sbjct: 27  NTPSSARIMLWVMVLFFILAGAWASWAQIDKVTVGQGKVVPSSQIQVVQNLEGGLVKQIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD--FLNNKY----- 124
           V  G Q+ +G  LL  +D         ++  + NL   +    +++    +N+++     
Sbjct: 87  VREGEQVKKGQQLLLIDDTRFRSDYREREQQVANLTASVLQLSASIASVVVNDEFTEAEW 146

Query: 125 ------DVLEKAF-----ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                 D  + AF     ES+ + +     +Y      + N  +S + + +K K   +  
Sbjct: 147 EKSVRIDYTKLAFPPALVESQPDLVERQRAQYRQDLDNLRNQ-LSVISQQVKQKQQDL-- 203

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                ++++ +   LR   S   K+L + K L ++  V + +L + +R V  +  +L  +
Sbjct: 204 -----VEIQARVRNLRQSYSYANKELEITKPLADEGVVPRIELLKLQRQVNDTRRDLTSS 258

Query: 234 ---IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +   K+ LR       +A L+F +  +E    L Q Q   +        LE    + 
Sbjct: 259 ELKVPVLKSALRESMLSRIDAALKFRSQQQEA---LNQTQDKLSAMTESTVGLEDRVNRT 315

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            +LSP+ GTI      +     Q    +++IVP      + A++ P+ I  ++    A V
Sbjct: 316 VVLSPVTGTIKTLYVNTVGGVIQPGMDIVEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIV 375

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGF 409
           +F  Y   +    +  +E I    SQ ++      +Y V  +  + +   D ++ +  G 
Sbjct: 376 KFSAYDFTKYGGLEGTLEHISADTSQDEDG---NSFYLVRARTKETSLGHDESLPIIPGM 432

Query: 410 PAEV-LFTAKNTTL 422
            A V + T K T L
Sbjct: 433 TASVDIITGKRTVL 446


>gi|83949566|ref|ZP_00958299.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Roseovarius nubinhibens ISM]
 gi|83837465|gb|EAP76761.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Roseovarius nubinhibens ISM]
          Length = 395

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 118/257 (45%), Gaps = 29/257 (11%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAV---SQNDLNQQERIVYKSTLELRENIHEQK---NMLR 242
           R+LL + Q D   +K      AV   ++ +++  ER++ K  + L E    +K   +   
Sbjct: 143 RSLLQARQAD--YVKRSEGAGAVLKQAREEMDLLERLLKKKVVALIEVTRARKSHADAKT 200

Query: 243 HINELYDEANL----EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             +E+  +  L    E+++ LKE++  L QN     D++          ++ T++SP+ G
Sbjct: 201 RYDEIVTQTELDRAQEYSDTLKELA-TLRQNLAASLDQL----------DRTTLVSPMRG 249

Query: 299 TIVYNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
            IV + + ++     +  + ++ I P  +  ++ A+V P+ I ++++G  AT++   Y  
Sbjct: 250 -IVNDLNITTIGGVVRPGEQILSITPLDEELFVEARVAPEDIGNIREGQEATIKLTAYDY 308

Query: 358 IREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEV 413
                 K  ++ I  D    +   +     +Y+V LK+  T L      IE+R G  +EV
Sbjct: 309 TIYGTLKGEVDFISSDTFKDENARDPNGDPHYKVTLKVDMTALTPRQQAIEIRPGMLSEV 368

Query: 414 LFTAKNTTLAQEIIHPI 430
                  T+ Q ++ P+
Sbjct: 369 ELHTGGKTVLQYLLKPL 385


>gi|317050415|ref|YP_004111531.1| HlyD family type I secretion membrane fusion protein
           [Desulfurispirillum indicum S5]
 gi|316945499|gb|ADU64975.1| type I secretion membrane fusion protein, HlyD family
           [Desulfurispirillum indicum S5]
          Length = 433

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 91/434 (20%), Positives = 173/434 (39%), Gaps = 51/434 (11%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL  +G  G + W+I  P+   + + G +  E N   ++  + GI+++  V     + +G
Sbjct: 19  LLIGLGFGGFLLWAITAPLGKGIVAEGVVSVETNRKAVQHLYGGIVEEILVRENQLVQKG 78

Query: 82  TPLLTFEDIE-----TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
             L+   D       TT   +L  V ++  R     E+  L  +    +VL     S + 
Sbjct: 79  ELLIRLADSRPRAEYTTARYELISVQVQYARLL--AERGGLPDVIFPLEVLS----SDDT 132

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK--SSLLRALLSS 194
           ++++ +     T  ++F           +  L   + I L  ++ + K   SL   L S 
Sbjct: 133 EVVELV----QTQRELFE--------RRRKSLQNEQQIILENIEAQQKYIESLGDVLASR 180

Query: 195 HQK------DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            ++      +L  ++ L +     +N L  QER + +      E++         I EL 
Sbjct: 181 DRQIMLLKEELAGLRELAKDGHYPRNSLLNQERALEEIISRRSEDLAAIARTQSSITEL- 239

Query: 249 DEANLEFANYLKEISRDLEQN----QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               L      ++   D+E      QR       +    +   ++  +L+P +G ++   
Sbjct: 240 ---RLSLVKLEQDFHHDVEAQISDAQRRLGSLREQYHAAKDILQRTDVLAPESGIVLSLS 296

Query: 305 SFSSSNYAQQSQPLMKIVP-HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           + +     +  + +M+IVP H++L  + AK++P+ I  V +   A +RF  + D R    
Sbjct: 297 AHTIGGVVRAGETVMEIVPVHAELI-VEAKISPQDIDRVHRDMQADLRFSAF-DARNTPV 354

Query: 364 ---KAIIEKIDPIISQQDNNLQTQEYY--EVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
              + I    D +I +Q        YY  ++ +   +L     N  L  G PAEV+    
Sbjct: 355 IEGEVIAVSPDRLIDEQTR----MPYYLSKIAISPEELQKLGANNRLVPGLPAEVVIKTG 410

Query: 419 NTTLAQEIIHPITD 432
             TL Q +I P  D
Sbjct: 411 ERTLLQYLIDPFLD 424


>gi|15601830|ref|NP_233461.1| HlyD family secretion protein [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|153821725|ref|ZP_01974392.1| secretion protein, HlyD family [Vibrio cholerae B33]
 gi|254850238|ref|ZP_05239588.1| secretion protein [Vibrio cholerae MO10]
 gi|9658526|gb|AAF96973.1| secretion protein, HlyD family [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|126520721|gb|EAZ77944.1| secretion protein, HlyD family [Vibrio cholerae B33]
 gi|254845943|gb|EET24357.1| secretion protein [Vibrio cholerae MO10]
          Length = 481

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 45  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 104

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 105 VREGEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDENF 159

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 160 EEK-----NWANSVQLDYSKLAFPPVLSDSQPDL---VERQRDQYRQDLDNLRNQLSVLS 211

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 212 QQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRR 271

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 272 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 331

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 332 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPA 391

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 392 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDQNLPIIP 448

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 449 GMTASVDIITGKRTVL 464


>gi|148545442|ref|YP_001265544.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida F1]
 gi|148509500|gb|ABQ76360.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida F1]
          Length = 458

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 96/441 (21%), Positives = 173/441 (39%), Gaps = 64/441 (14%)

Query: 19  RMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           R+  L+I G+I     LI W+ + PI+      G+ +    V +I++   GI+ +   + 
Sbjct: 42  RVVRLTIWGVILFFVFLIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGIVAEIFAKE 101

Query: 75  GSQILQGTPLLTFEDIETTDLI-----DLKKVSIKNLRCHIDTEKSAL-------DFLNN 122
           G  +  G PLL  ++      +     D   ++++  R   + + S L           N
Sbjct: 102 GQIVEVGQPLLRLDETRFASNVGETEADRLAMALRVERLSAEVQDSPLIIDEKLRKAAPN 161

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +    E  ++SR +QL D +G       +               + +  R+ Y N L+L 
Sbjct: 162 QAASEESLYQSRRQQLQDEIGGLQQQLVQRQQE---------LREYSSKRTQYANSLEL- 211

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN---IHEQKN 239
                LR       K+++M + L    A+SQ ++ +  R   ++  +L      I   + 
Sbjct: 212 -----LR-------KEISMSEPLVATGAISQVEVLRLRRAEVENRGQLDSTALAIPRAEA 259

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQ--NQRTFADEMSKLTILEKTREQKT----IL 293
            +R +    +E   +F       S  L Q    RT   E++K T   K  + +     + 
Sbjct: 260 AIREVQSKIEETRGKFR------SEALTQLNEART---ELNKATATSKALDDRVHRTLVT 310

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ G +      +     Q    ++++VP      I AK+ PK I  +  G  ATV+F 
Sbjct: 311 SPVRGIVKQLLVNTIGGVIQPGSDIIEVVPLDDTLVIEAKILPKDIAFLHPGQEATVKFT 370

Query: 354 HYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGF 409
            Y        KA +E+I    I+ +D       YY + L+ TD   L   +  + +  G 
Sbjct: 371 AYDYTIYGGLKAKLEQIGADTITDEDKKTT---YYLIKLR-TDRSHLGTDEKPLLIIPGM 426

Query: 410 PAEVLFTAKNTTLAQEIIHPI 430
            A V       T+   ++ PI
Sbjct: 427 VATVDIMTGKKTIMSYLLKPI 447


>gi|229528036|ref|ZP_04417427.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae 12129(1)]
 gi|229334398|gb|EEN99883.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae 12129(1)]
          Length = 463

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 27  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 87  VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDENF 141

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 142 EEK-----NWANSVQLDYSKLAFPPVLSDSQPDL---VERQRDQYRQDLDNLRNQLSVLS 193

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 194 QQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRR 253

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 254 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 313

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 314 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIVPQDIAFLRPDLPA 373

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 374 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDQNLPIIP 430

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 431 GMTASVDIITGKRTVL 446


>gi|254513358|ref|ZP_05125423.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
 gi|221532362|gb|EEE35358.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
          Length = 446

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 98/451 (21%), Positives = 180/451 (39%), Gaps = 75/451 (16%)

Query: 14  PASLKRMTLLSIIG--IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF-SGIIKKF 70
           P  + RM  L +IG  ++  I WS    ++I V + G+++    V ++  PF SG ++  
Sbjct: 26  PNPISRMLGL-LIGTLVVSGIAWSYFGRVDIVVVAQGQLVPVGGV-KVIQPFESGTVRSI 83

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVS---------IKNLRC---HIDTEKSALD 118
           +V +G ++  G  L+  +   T  L D  +++         I  LR    HID E+    
Sbjct: 84  EVYDGKRVQAGDVLIELDP--TDSLSDAGQLAEELAEASANIARLRVLLDHIDGEEGG-- 139

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLN 177
                  V+E +    + +L   L  Y     K+ F   +SS    ++       +I   
Sbjct: 140 -------VIEPSAYFDQNKLRVSL--YQLQADKIGFEAQVSSFQAEIERNFAEEAAILA- 189

Query: 178 RLDLENKSSLLRALL-------SSHQKDLTMMKNLFEKNA----VSQNDLNQQERIVYKS 226
             +LE + +LL  L        S  +K LT  + + E  A     SQ+ + QQ R+    
Sbjct: 190 --ELEKQQALLPLLEVQETELNSLLEKGLTPKQRVLEMRARRIETSQDIIVQQYRLA--- 244

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             E++ +   Q   L              A+   E    L + ++TF      L  +E+ 
Sbjct: 245 --EIQASTRAQGRTLEKFT----------ADTRSEFVAQLIEAEKTFNQTKLALQTVERQ 292

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           +E  ++ +P+ GT+      +       ++PLM +VP      +++K+  K    ++ G 
Sbjct: 293 KELNSLKAPVNGTVQQLSIHTVGGVVSPAEPLMVVVPSDAELEVKSKILNKDKGFIQPGM 352

Query: 347 TATVR-----FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFS 399
            A V+     F  Y  +   K K+I E      + +D NL     ++ ++ I    L   
Sbjct: 353 QAEVKIDAFPFTKYGTVT-GKLKSISED-----AVEDQNLGL--VFDAVVSIDKQQLTID 404

Query: 400 DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            N+I L  G   +         + + ++ PI
Sbjct: 405 GNDILLTPGMSVQAELKTGTRRIIEFVLTPI 435


>gi|159042694|ref|YP_001531488.1| type I secretion membrane fusion protein [Dinoroseobacter shibae
           DFL 12]
 gi|157910454|gb|ABV91887.1| type I secretion membrane fusion protein [Dinoroseobacter shibae
           DFL 12]
          Length = 435

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 93/463 (20%), Positives = 185/463 (39%), Gaps = 60/463 (12%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     +  PA  +R  L+  I +     G  +WS++  I  ++ + G+I  + N   ++
Sbjct: 1   MTGPAAKKFPA--RRQLLIGGIALAILVGGFGSWSVMANIAGAIIAPGQIEVDQNRQVVQ 58

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFED-IETTDL--IDLKKVSIKNLRCHIDTEKSAL 117
            P  G++++  V+ G  +  G  L+  +  +  TDL  ++ +   +   R  +  E+   
Sbjct: 59  HPDGGVVQRIAVDEGDTVATGDLLIQLDPTLLQTDLSIVEGQLFELMARRALLVAERDGQ 118

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + +    ++L  +  S E      +        ++F    +SV    + +LTR R+   N
Sbjct: 119 EEVIFDEELLLVSATSPE------VADVMDGQRRLFEARNTSVETETE-QLTRRRAQIGN 171

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           +++           + + Q  LT   +L E+    Q  L  +        L L+    EQ
Sbjct: 172 QIEG----------IEAQQTALTQQLDLIEQELADQQSLLDRGLAQASRVLSLQ---REQ 218

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT------ 291
             +L  + EL   +  EF     EI  D+E  + + +     ++ L  T+ Q++      
Sbjct: 219 ARLLGSVGELT-ASKAEFEGRQTEI--DIEILKLSTSRREEAISRLRDTQAQESELKQQR 275

Query: 292 -----------ILSPIAGTIVYNQS-FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                      I +P+ G IVY+ S F+  +  + ++P++ IVP  +   I ++V P  +
Sbjct: 276 QALRERLSRLDIRAPLGG-IVYDLSVFAERSVIRPAEPVLYIVPQDRPLIITSRVNPINV 334

Query: 340 QHVKKGYTATVRFPHYADIR---EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             V  G    +RF  + D R   E K K +    D  + +         +Y V     + 
Sbjct: 335 DEVYVGQEVNLRFSAF-DQRLTPELKGKVVSVSPDAFVDEATGA----SFYRVETAPQEG 389

Query: 397 AFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                  ++L  G P E      + T  +  + P++D + + F
Sbjct: 390 EMEKLEGLDLIPGMPVEAFIRTADRTPIEYFVKPLSDYFNRAF 432


>gi|259418490|ref|ZP_05742408.1| type I secretion membrane fusion protein, HlyD [Silicibacter sp.
           TrichCH4B]
 gi|259345885|gb|EEW57729.1| type I secretion membrane fusion protein, HlyD [Silicibacter sp.
           TrichCH4B]
          Length = 379

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 111/276 (40%), Gaps = 47/276 (17%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           T +R     R  LE     L A   S Q+ + +   L  K +VS+ D+ + E    +   
Sbjct: 131 TELRLFEARRTKLEASLEALEAERLSIQEQIDITSPLVAKGSVSRIDVLRLE----QQRA 186

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK--T 286
           EL   I + +N                  Y+++  +DL Q +       +KLT L++   
Sbjct: 187 ELEGKISDTRNA-----------------YVQDAYKDLAQRR-------AKLTALQQDVV 222

Query: 287 REQKTIL-----SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           R+Q   L     SP++G +      +     Q  +P+M++ P      I  KV P+ +  
Sbjct: 223 RKQDEFLRTEIRSPVSGRVNNIDITTLGGVIQPGEPIMEVTPTDDQLLIETKVLPRDVAF 282

Query: 342 VKKGYTATVR-----FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD- 395
           +  G  A+V+     F  Y D+R      ++ +I     ++D     Q++Y V+++  + 
Sbjct: 283 IAPGMEASVKITAYDFSTYGDLR-----GVVTQISEDTVEEDTPQGPQDFYRVMVRTGNN 337

Query: 396 -LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            L        +R G  A+V   +   ++   +  P+
Sbjct: 338 FLERHGETFAIRPGMLAQVDIESGERSVLSYLTRPL 373


>gi|229514485|ref|ZP_04403946.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae TMA 21]
 gi|229348465|gb|EEO13423.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae TMA 21]
          Length = 463

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 27  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 87  VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDENF 141

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 142 EEK-----NWTNSVQLDYSKLAFPPVLSDSQPDL---VERQRDQYRQDLDNLRNQLSVLS 193

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 194 QQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRR 253

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 254 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 313

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 314 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPA 373

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 374 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDQNLPIIP 430

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 431 GMTASVDIITGKRTVL 446


>gi|115345650|ref|YP_771831.1| HlyD family secretion protein [Roseobacter denitrificans OCh 114]
 gi|115292971|gb|ABI93423.1| HlyD family secretion protein [Roseobacter denitrificans OCh 114]
          Length = 437

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 86/442 (19%), Positives = 171/442 (38%), Gaps = 40/442 (9%)

Query: 16  SLKRMTLLSIIGIIGLIT----WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           S++ + L  +IG++ L+     W+    I  +V + G+ +   N  +++    GI+    
Sbjct: 15  SMRSVFLAGLIGLVALLGGVGFWAGTTLINGAVIAQGQAVVRGNAKQVQHLDGGIVADIL 74

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLE 128
           V++G  +  G  L+  +       +D+ +  + +    +  +  E+  L  L   Y  L 
Sbjct: 75  VQDGDGVQAGDVLIRLDPTLVRMNLDVTRQRLADALTQQARLRAEQQGLGTLTFVYPDLP 134

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSL 187
             FE  +      +    +    +F    ++V    + +L      + N+++ L ++   
Sbjct: 135 --FEMPD------MAANEAGQRAIFT-ARAAVQTGGRDQLAEAFRQFENQIEGLTSQMEA 185

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQ---NDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + A +    KDL  M+ L E+N   Q   NDLN+    +      L  +I +  N  R  
Sbjct: 186 ISAQIGFVSKDLDNMQVLVERNLARQSQLNDLNRTRADLEGRRAALASDIAQLSNARR-- 243

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK----TILSPIAGTI 300
                EA ++     +     +  + RT   ++ +L +   TR  +     I +P AG +
Sbjct: 244 -----EAEIQTLQSERSFQESVVTDLRTITSQVDELILDIVTRAAQLDRINIRAPAAGIV 298

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              Q  +        Q + +I+P  +      +V P+ I  V  G  A      + D+ E
Sbjct: 299 HELQISTVGGVIDPGQVIAEIIPQDQALDFELRVQPQDIDQVYIGQEAETLIAAF-DVNE 357

Query: 361 -KKFKAIIEKIDP--IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFT 416
             K    + +I P  I+  Q      Q YY + L +     +    + ++ G P E    
Sbjct: 358 TPKLIGSVARISPNAIVDPQTG----QSYYLINLTVPAEEIARLGGLRIKPGMPVEAYLA 413

Query: 417 AKNTTLAQEIIHPITDNWPKIF 438
               T+   +I P+T    + F
Sbjct: 414 TGERTVLGYLISPVTTQMRRAF 435


>gi|229505789|ref|ZP_04395298.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae BX 330286]
 gi|262168909|ref|ZP_06036603.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae RC27]
 gi|229356140|gb|EEO21058.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae BX 330286]
 gi|262022608|gb|EEY41315.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae RC27]
          Length = 463

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 27  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 87  VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDENF 141

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 142 EEK-----NWANSVQLDYSKLAFPPVLSDSQPDL---VERQRDQYRQDLDNLRNQLSVLS 193

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 194 QQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRR 253

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 254 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 313

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 314 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPA 373

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 374 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDQNLPIIP 430

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 431 GMTASVDIITGKRTVL 446


>gi|254466904|ref|ZP_05080315.1| type I secretion membrane fusion protein, HlyD [Rhodobacterales
           bacterium Y4I]
 gi|206687812|gb|EDZ48294.1| type I secretion membrane fusion protein, HlyD [Rhodobacterales
           bacterium Y4I]
          Length = 434

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 80/371 (21%), Positives = 152/371 (40%), Gaps = 57/371 (15%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N     P  +  +TLL ++G  G  +WS+L  I  +V +SG I  + N   ++    GI+
Sbjct: 6   NWSAQRPLIIGLITLLVLVG--GFGSWSVLSSISGAVVASGRIEVDRNRQVVQHLDGGIV 63

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKY 124
            +  V+ G  + +G  L+  +  E T  + + +  +  L   R  ++ E+     +    
Sbjct: 64  AEILVDEGDTVQEGDTLIRLDANELTSQLVITEGQLFELMARRGRLEAERDEAADITFDE 123

Query: 125 DVLEKAFESR-------EEQLLDFLGKYHSTCSKVFNY------------GISSVYRSLK 165
           ++LE A E++       E Q   F  +  +T  ++               GI +  +S+K
Sbjct: 124 ELLE-AVETQPDVQDLVEGQQRLFQARRATTAREIEQLEKRRVQIEEQIRGIQAQQQSMK 182

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           ++L  +        +L N+ SLL   L+     L + +        +Q +L  Q      
Sbjct: 183 VQLELINE------ELSNQQSLLDRGLAQAATVLNLRR--------TQANLEGQ------ 222

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS----RDLEQNQRTFADEMSKLT 281
               L E +  +      I E+ D   L+ A   +E +    RDL   +   A+    L 
Sbjct: 223 ----LGELVAAEAQAEGRITEI-DIEILKLATGQREEAITRLRDLRTQEVELAETRRSL- 276

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
              +  E+  I +P++G +   Q  +  +  + + P++ +VP  +   I A+V P  I  
Sbjct: 277 --RQRLERLDITAPVSGIVYGMQVQTPRSVIRPADPVLYLVPQDRPLVIAAQVAPTDIDQ 334

Query: 342 VKKGYTATVRF 352
           +  G   T+RF
Sbjct: 335 LYTGQEVTLRF 345


>gi|297579882|ref|ZP_06941809.1| secretion protein [Vibrio cholerae RC385]
 gi|297535528|gb|EFH74362.1| secretion protein [Vibrio cholerae RC385]
 gi|327486038|gb|AEA80444.1| ABC-type protease exporter, membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae LMA3894-4]
          Length = 463

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 27  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 87  VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDENF 141

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 142 EEK-----NWANSVQLDYSKLAFPPVLSDSQPDL---VERQRDQYRQDLDNLRNQLSVLS 193

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 194 QQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRR 253

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 254 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 313

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 314 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPA 373

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 374 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDQNLPIIP 430

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 431 GMTASVDIITGKRTVL 446


>gi|29421540|gb|AAO73513.1| RsaE [Caulobacter vibrioides]
          Length = 419

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/347 (16%), Positives = 143/347 (41%), Gaps = 36/347 (10%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L+ +G++G   W+   P++ +V ++G +  + N   I+    G++ K  V  G ++  G 
Sbjct: 26  LTFVGVLG---WAAFAPLDSAVIANGVVTTDANKT-IQHLEGGMLSKILVREGERVKAGQ 81

Query: 83  PLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKS-------ALDFLNNKYD-VLEKAF 131
            L   +  +      + +   V+ + L   +  E+          + L  + D V+ +A 
Sbjct: 82  CLFQLDPTQVNAAAGITRAQYVAFRALEARLVAERDQRPTISFPTELLTQRADPVVARAL 141

Query: 132 ESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLL 188
              + Q   F+ +  +   +V  FN                 R  + + +D +E ++  L
Sbjct: 142 ADEQSQ---FIERRQTIQGQVDLFNA---------------QRIQFFSEIDGIERQAQGL 183

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L   Q++L  ++ +++K  V +  L   ER     +  + +   ++   ++ + E  
Sbjct: 184 KEQLGFIQEELIDLRKIYDKGLVPRPRLLALEREQGSLSGAIGQLNADRSKAIQGMGETQ 243

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +       + +E+S  + + +   A+   +  +    +++  I+SP+ G     + F+ 
Sbjct: 244 LKIRQIREQFFEEVSEAIAETRVQLAEVSEREVVAADAQKRVNIVSPVNGVAQALRFFTD 303

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
               + ++ L+ I P  +   I A+  P  + ++ +G    VR P +
Sbjct: 304 GAVVRSAEALVDIAPDERSFEIHAQFAPTDVDNIHEGMVTEVRLPSF 350


>gi|330809666|ref|YP_004354128.1| Alkaline protease secretion protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327377774|gb|AEA69124.1| Alkaline protease secretion protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 444

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 74/420 (17%), Positives = 158/420 (37%), Gaps = 26/420 (6%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L+++G     TW+ L P++  +   G ++       ++S  SG++ +  V  G  + QG 
Sbjct: 32  LALVGAGSFFTWASLAPLDQGIPVQGTVVVSGKRKAVQSMSSGVVSRILVREGEVVKQGQ 91

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD-VLEKAF--------ES 133
           PL   +  +           +++L+       ++L    ++ D +L+ +F        + 
Sbjct: 92  PLFRLDQTQAA-------ADVQSLQAQYRMTWASLARWQSERDNLLQVSFPAELSRDPDP 144

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R   +L+   +  S+  + F    +++  +++    ++  +   R DL  ++  LR  L 
Sbjct: 145 RLALVLEGQRQLFSSRREAFAREQAALRANIEGAAAQLAGMRRARSDLTAQAESLRLQLG 204

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           +       ++ L +   + +N L   +R + +   EL +N  E   + + I E   +   
Sbjct: 205 N-------LQPLADNGYIPRNRLLDYQRQLSQVQQELAQNSGESGRVEQGIVESRLKLQQ 257

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               Y KE+   L   Q        +L       +   IL+   G  V     +     +
Sbjct: 258 HHEEYQKEVRSQLADAQLKSETLQQQLKSAGFELQHSEILATADGIAVNLGVHTEGAVVR 317

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           Q   L++IVP      +   +    I  V       + F  +   R  +    +  I   
Sbjct: 318 QGDTLLEIVPQGTRLEVEGHLPVHLIDKVGPHLPVDILFTAFNQNRTPRVPGEVSLIS-- 375

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
             Q  +      YY +   ++D+A    N + ++ G PAE+       +L   +  P+ D
Sbjct: 376 ADQMLDEKTGAPYYVLRSSVSDVAMDKLNGLVIKPGMPAEMFVRTGERSLLNYLFKPLLD 435


>gi|307296485|ref|ZP_07576308.1| type I secretion membrane fusion protein, HlyD family [Sphingobium
           chlorophenolicum L-1]
 gi|306877999|gb|EFN09223.1| type I secretion membrane fusion protein, HlyD family [Sphingobium
           chlorophenolicum L-1]
          Length = 390

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 76/343 (22%), Positives = 141/343 (41%), Gaps = 61/343 (17%)

Query: 19  RMTLLSIIGIIGLIT----WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           R + L IIGII   +    WS    ++    + G+I+    V  I+S   G I    V  
Sbjct: 13  RPSSLIIIGIIAFFSLALIWSFWAELDQVSRAPGQIIPTGRVQVIQSTDGGKIANILVRE 72

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L+  +D + +        ++   +  + +  S++  +N +      AF + 
Sbjct: 73  GEAVKKGQLLVQLDDTKIS-------AAVGEAQGKVASLMSSMARINAELFDRPLAFPAE 125

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            +   DF+        K                          R  L+++ + LRA+L+ 
Sbjct: 126 VKPFPDFMANQTLLYQK-------------------------RRQALQDQLASLRAMLAL 160

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            +++L M   L +   VS+ D+ + +R V     +++  I   KN  ++I +L      E
Sbjct: 161 MEQELNMNMPLLQHGDVSRADVLRLQRGVS----DIQSQIVNAKN--KYIQDL----QAE 210

Query: 255 FANYLKEISRDLEQ-NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNYA 312
           +    +++    E  NQR+ A        LE TR    I++P+ G IV N   ++     
Sbjct: 211 YTKTEEDLVTAREVFNQRSDA--------LEDTR----IVAPVDG-IVKNVRLTTIGGVL 257

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + S  ++ IVP      +  K+ P  I +V+ G  A+V+F  Y
Sbjct: 258 RPSDEVVSIVPTGDQLILETKMPPSDIAYVRVGQPASVKFDAY 300


>gi|218245403|ref|YP_002370774.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8801]
 gi|257058439|ref|YP_003136327.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8802]
 gi|218165881|gb|ACK64618.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8801]
 gi|256588605|gb|ACU99491.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8802]
          Length = 576

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 54/86 (62%), Gaps = 4/86 (4%)

Query: 19  RMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R  + +I+G+    + W+ +  IE  V++ G++  +D V EI++P +G++++  V++G +
Sbjct: 59  RAVVWTIVGVTTASVIWAAVATIEQVVTAKGQLKPQDTVKEIQAPLNGVVEEVLVKDGDR 118

Query: 78  ILQGTPLLTFEDIETT--DLIDLKKV 101
           + +G  L++  D E+T  +L+ L KV
Sbjct: 119 VKKGQVLVSM-DSESTKAELVSLTKV 143


>gi|229510356|ref|ZP_04399836.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae B33]
 gi|229517512|ref|ZP_04406957.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae RC9]
 gi|229605322|ref|YP_002876026.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae MJ-1236]
 gi|255746192|ref|ZP_05420139.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholera CIRS 101]
 gi|262158681|ref|ZP_06029795.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae INDRE 91/1]
 gi|229345548|gb|EEO10521.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae RC9]
 gi|229352801|gb|EEO17741.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae B33]
 gi|229371808|gb|ACQ62230.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae MJ-1236]
 gi|255735946|gb|EET91344.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholera CIRS 101]
 gi|262029561|gb|EEY48211.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae INDRE 91/1]
          Length = 463

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 27  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 87  VREGEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDENF 141

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 142 EEK-----NWANSVQLDYSKLAFPPVLSDSQPDL---VERQRDQYRQDLDNLRNQLSVLS 193

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 194 QQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRR 253

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 254 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 313

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 314 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPA 373

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 374 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDQNLPIIP 430

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 431 GMTASVDIITGKRTVL 446


>gi|229526379|ref|ZP_04415783.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae bv. albensis VL426]
 gi|229336537|gb|EEO01555.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae bv. albensis VL426]
          Length = 463

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 86/436 (19%), Positives = 175/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 27  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSPQVQVIQNLEGGLVKQIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL   +    +++  +     ++++ F
Sbjct: 87  VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSV-----IIDENF 141

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 142 EEK-----NWTNSVQLDYSKLAFPPVLSDSQPDL---VERQRDQYRQDLDNLRNQLSVLS 193

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 194 QQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRR 253

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 254 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 313

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 314 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPA 373

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 374 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDQNLPIIP 430

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 431 GMTASVDIITGKRTVL 446


>gi|190890001|ref|YP_001976543.1| protein secretion protein, HlyD family [Rhizobium etli CIAT 652]
 gi|190695280|gb|ACE89365.1| probable protein secretion protein, HlyD family [Rhizobium etli
           CIAT 652]
          Length = 406

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 82/426 (19%), Positives = 178/426 (41%), Gaps = 56/426 (13%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ L P++ +  + G I    +   I+    GII      NG  +  G  L+  +  +  
Sbjct: 5   WATLAPLDSAAVAPGVIKVAGDRKLIQHLEGGIIADLNAANGDIVKAGKVLIQLDSTQAR 64

Query: 94  DLIDL-------KKVSIKNLRCHIDTEKSALDF----LNNKYDVLEKAFESREEQLLDFL 142
             +DL       ++     LR   D +K+ ++F    L N     + A  ++ +    F 
Sbjct: 65  TKLDLVQNRIATREALAARLRAERD-DKAEIEFDPALLANSSKSAKDAVAAQRDV---FA 120

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            K+H+   +     +S   R  + ++T ++ + +     E+K      +     KDL   
Sbjct: 121 AKHHNLQDE--REILSQRRRQTQEEITGLQELIVT----EDKQI---EVFEDETKDL--- 168

Query: 203 KNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANY 258
           ++L ++  V++     L +Q+R V          I   K+ +  I+ ++ + + L     
Sbjct: 169 ESLLKRGLVTRERGLLLTRQQREVEGDRATNVAAIARAKSAMAEIDMQILNLSTLRLNEA 228

Query: 259 LKEISR------DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           ++E+S+      DL Q +R+  D      +L +T     I++P+ G ++  +  ++    
Sbjct: 229 VEELSKVEAELVDLRQEERSAKD------VLART----DIIAPVDGIVMDLKVHTAGGVV 278

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-- 370
           +  + LM +VP  +   + A V P+ ++ +  G  A V FP +A       + ++  +  
Sbjct: 279 KPGETLMTVVPLGQQLVVEAMVRPEDVETIAPGQRARVSFPAFARYNLPPLEGVVGIVSA 338

Query: 371 DPIISQQDNNLQTQEYYE--VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           D ++ ++        Y+   V++  ++LA  +   +L  G  +E +      T+   +  
Sbjct: 339 DRMVEERSG----APYFAATVLIDKSELAKLEGR-KLMPGMSSEAMIRTGARTVLSYLAE 393

Query: 429 PITDNW 434
           PIT N+
Sbjct: 394 PITQNF 399


>gi|254294998|ref|YP_003061021.1| type I secretion membrane fusion protein, HlyD family [Hirschia
           baltica ATCC 49814]
 gi|254043529|gb|ACT60324.1| type I secretion membrane fusion protein, HlyD family [Hirschia
           baltica ATCC 49814]
          Length = 445

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 93/419 (22%), Positives = 170/419 (40%), Gaps = 46/419 (10%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           I+  + WS    I     +SGE++ +     ++    GII K  VE G  +  G  L++ 
Sbjct: 46  ILAFLVWSSFTNINEVARTSGEVIPQGKKQLVQHLEGGIIDKIHVEEGDLVEAGQLLVSI 105

Query: 88  EDI---ETTDLIDLKKVSIK----NLRCHIDTEK---SALDFLNNKYDVLEKAFESRE-- 135
                 E   ++  K+V ++     LR  I+  +   S  D    KY   + +FES +  
Sbjct: 106 SAKAINEDHRILVAKQVFLQLQAERLRAFIEKREPDFSGFDLSALKYSDQQASFESMKVS 165

Query: 136 -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            EQ L  + +      +    G+ S   S   KL   + IY NR  L  K       L  
Sbjct: 166 REQELQIVSRQLEQKHE-LERGLLSQKASETEKLKISQQIYDNRKSLAEKGLFPAVRLME 224

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            +  LT +K+       S   LN + R+        R+ ++E ++ +  +     +  LE
Sbjct: 225 EELKLTKLKD-------SVAALNNKLRLA-------RQEMNEYESRIAGLQATQSDQVLE 270

Query: 255 FANY-LKEISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVYNQSFSSSNYA 312
             N  + EIS    QN+    D++++       R Q+  I++P++G +      +     
Sbjct: 271 RLNITVSEIS----QNENA-VDKLNE-------RIQRLNIVAPVSGRVKGMSVNTVGEVL 318

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              + +M+IVP  +   +  K++PK I ++++G    V+F  + D    +F A+  K+D 
Sbjct: 319 TAGETVMEIVPQDRTLEVHVKISPKDIGYLRRGQPVRVKFSAF-DF--SRFGAVNGKLDY 375

Query: 373 IISQQDNNLQTQEYYE-VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           I +          +Y+  IL       +D   ++  G            T+ Q ++ PI
Sbjct: 376 ISAATFTEPNGGRFYKGTILLDKSFVGADTRNQILPGMTVMADVVTGEKTILQYLLKPI 434


>gi|148255279|ref|YP_001239864.1| putative RTX secretion protein D [Bradyrhizobium sp. BTAi1]
 gi|146407452|gb|ABQ35958.1| putative RTX secretion protein D [Bradyrhizobium sp. BTAi1]
          Length = 447

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 82/450 (18%), Positives = 173/450 (38%), Gaps = 43/450 (9%)

Query: 11  RNHP--ASLKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           R  P  A   R  LL  I I     G   WS   P++ +  + G +    +   ++    
Sbjct: 16  RPQPVKADFGRYALLGYISIALVFGGFGVWSAYAPLDRAAIAPGTVSVSGDHKVVQHREG 75

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL------- 117
           GI+++   +   ++ +G  L   +  E     DL +   K +   +  E   L       
Sbjct: 76  GIVREILAKETREVRRGDLLFRLQPTEAQANTDLLR---KQMDAALAEEARLLAERGNAR 132

Query: 118 -----DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTR 170
                D L N+ +V E A    ++Q L F+ + +   S++   N  I    + L  +   
Sbjct: 133 MITFPDSLLNRQNVPEAALAIADQQRL-FIERRNGLISQINILNSQIVQQQQELAGR--- 188

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
                      + + + L A L+S    +  ++    +    +N   + ER   +   +L
Sbjct: 189 -----------DRQRAALGAQLASFDTQMNNVRPAVAQGYYPRNKFLELERDRARVEGDL 237

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            +   +   + +   +   + +     Y  E+ + L+  +   +D   KL I E    + 
Sbjct: 238 GQAQADVARLTQTAAQTRLQIDQALQKYQTEVGQQLDGTRAKLSDLREKLVIAEDVLRRV 297

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +   G ++  +  +     +    L +IVP  +   + A V+P+ I+ V  G  A V
Sbjct: 298 DIRAERDGIVMNMKVHTVGAVVKPGDTLAEIVPIGEGVDVMAHVSPRDIESVAVGQKAEV 357

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNG 408
           RFP+++    +    I  K+  + +   ++  T++ Y     + D +     I  ++  G
Sbjct: 358 RFPNFS---SRTTPTIFGKVQSVSADAISDEATKQSYYSARVVIDYSTLPPEIASKIMPG 414

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             A+V+ +    T+ + ++ P+ +   K F
Sbjct: 415 MQADVIISTGERTVLEYLVGPLLNTLAKTF 444


>gi|254457948|ref|ZP_05071375.1| secretion protein, HlyD family [Campylobacterales bacterium GD 1]
 gi|207085341|gb|EDZ62626.1| secretion protein, HlyD family [Campylobacterales bacterium GD 1]
          Length = 460

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 98/439 (22%), Positives = 171/439 (38%), Gaps = 67/439 (15%)

Query: 22  LLSIIG---IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           LL  IG   II LI W+    I+      G+I+  + +  I++   GI+ +  V+ G  +
Sbjct: 48  LLLWIGMFVIIWLIAWAYNAKIDALTRGQGKIIPSNKIQVIQNLEGGIVSELLVKEGDTV 107

Query: 79  LQGTPLLTFEDIETTDL-----IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            +G  L+  +D     +     +   ++  K +R   ++  +A            K    
Sbjct: 108 KKGDILVKIDDTNFASMFIESQLRYNELEAKTIRLLAESTGNAFS--------ATKEIRK 159

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +  +L+      + T  +  N  I    R L  K   ++      + L N  +L+     
Sbjct: 160 KSPELIKHEFSLYRTNKEQLNNNIMIYNRRLNQKRNELKEAQAKLIQLTNNYTLI----- 214

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE------------LRENIHEQKNML 241
              +++ + K L +K  VS+ +  Q +R   +ST++            L   + EQK+ +
Sbjct: 215 --SREVALNKPLVKKGIVSEVEFLQLQR--QQSTIQGEMGAIELSIPRLISVLEEQKDNI 270

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT----ILSPIA 297
           R       E  L F N  KE   + +        EM+++      RE K     + SP+ 
Sbjct: 271 R-------EVELAFHNAAKEAYNEAKA-------EMTRIKRTNIAREDKVQRTFVRSPVT 316

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GTI      +     +    +++IVP      + AK+ P  I  +  G  A V+F  Y  
Sbjct: 317 GTIKQLLINTVGGVVKPGMDIIEIVPTQDNLLVEAKIRPADIAFLYPGQRAIVKFSAYDF 376

Query: 358 IREKKFKAIIEKIDP--IISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAE 412
                 +  +  I    I+ + D     Q YY V +K TD   L   D  + +  G  A+
Sbjct: 377 AIYGSLQGTLTHISAGTIVDEIDK----QSYYLVRVK-TDKNYLGNEDKKLNVIVGMTAD 431

Query: 413 V-LFTAKNTTLAQEIIHPI 430
           V + T K T L   I+ PI
Sbjct: 432 VDIITGKKTVL-DYILKPI 449


>gi|218661115|ref|ZP_03517045.1| protein secretion protein, HlyD family [Rhizobium etli IE4771]
          Length = 323

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 5/180 (2%)

Query: 261 EISRDLEQNQRTFAD-EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           EI+++L   +   A+ E  + T L++ R +  I +P++G +      + +   +  Q LM
Sbjct: 144 EIAKELTDVEAKIAENEERRETALDQLR-RLDITAPLSGRVHELAVHTINGVIEPGQTLM 202

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +VP +    ++AKV  + I  +  G +  VRF  +        +A+I  I P   + + 
Sbjct: 203 LVVPENDDLTVQAKVATRDIDQLHVGQSVDVRFSAFDQRTTPDVRAVITSIAPDTVKDER 262

Query: 380 NLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
              +  YY + +K    + +   +I+L  G PAEV     + T+   +  P+TD    +F
Sbjct: 263 TGIS--YYPLRVKPEAQSIAKLKSIKLYPGMPAEVFIKIADRTVISYLTKPLTDQMQHVF 320


>gi|26986910|ref|NP_742335.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida KT2440]
 gi|24981517|gb|AAN65799.1|AE016207_6 HlyD family secretion protein [Pseudomonas putida KT2440]
 gi|313496538|gb|ADR57904.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida BIRD-1]
          Length = 458

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 96/441 (21%), Positives = 172/441 (39%), Gaps = 64/441 (14%)

Query: 19  RMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           R+  L+I G+I     LI W+ + PI+      G+ +    V +I++   GI+ +   + 
Sbjct: 42  RVVRLTIWGVILFFVFLIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGIVAEIFAKE 101

Query: 75  GSQILQGTPLLTFEDIETTDLI-----DLKKVSIKNLRCHIDTEKSAL-------DFLNN 122
           G  +  G PLL  ++      +     D   ++++  R   + E   L           N
Sbjct: 102 GQIVEVGQPLLRLDETRFASNVGETEADRLAMALRVERLSAEVEDRPLIIDEKLRKAAPN 161

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +    E  ++SR +QL D +G       +               + +  R+ Y N L+L 
Sbjct: 162 QAASEESLYQSRRQQLQDEIGGLQQQLVQRQQE---------LREYSSKRTQYANSLEL- 211

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN---IHEQKN 239
                LR       K+++M + L    A+SQ ++ +  R   ++  +L      I   + 
Sbjct: 212 -----LR-------KEISMSEPLVATGAISQVEVLRLRRAEVENRGQLDSTALAIPRAEA 259

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQ--NQRTFADEMSKLTILEKTREQKT----IL 293
            +R +    +E   +F       S  L Q    RT   E++K T   K  + +     + 
Sbjct: 260 AIREVQSKIEETRGKFR------SEALTQLNEART---ELNKATATSKALDDRVHRTLVT 310

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ G +      +     Q    ++++VP      I AK+ PK I  +  G  ATV+F 
Sbjct: 311 SPVRGIVKQLLVNTIGGVIQPGSDIIEVVPLDDTLVIEAKILPKDIAFLHPGQEATVKFT 370

Query: 354 HYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGF 409
            Y        KA +E+I    I+ +D       YY + L+ TD   L   +  + +  G 
Sbjct: 371 AYDYTIYGGLKAKLEQIGADTITDEDKKTT---YYLIKLR-TDRSHLGTDEKPLLIIPGM 426

Query: 410 PAEVLFTAKNTTLAQEIIHPI 430
            A V       T+   ++ PI
Sbjct: 427 VATVDIMTGKKTIMSYLLKPI 447


>gi|24375801|ref|NP_719844.1| HlyD family secretion protein [Shewanella oneidensis MR-1]
 gi|24350751|gb|AAN57288.1|AE015865_2 HlyD family secretion protein [Shewanella oneidensis MR-1]
          Length = 484

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 81/396 (20%), Positives = 159/396 (40%), Gaps = 59/396 (14%)

Query: 19  RMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+ + ++  ++   + W+    ++   + SG+++    V  I+S   GI+++  V +G  
Sbjct: 53  RLIIWALAAMVACFLLWAGFAELDTVTTGSGKVIPSSQVQVIQSLDGGIMQELFVRDGDL 112

Query: 78  ILQGTPLLTFEDI--------ETTDLIDLKKVSIKNLRCHIDT----------------E 113
           + +G PL+  +D         +  ++  LK  +I+ +R  +D+                 
Sbjct: 113 VTKGQPLVRIDDTRFRSDFAQQEQEVFGLKTNAIR-MRAELDSILISDMTSDWREQVKIT 171

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K  L F ++     E A   R+++      +Y      + N         L++ + +++ 
Sbjct: 172 KKDLVFPDSIIQA-EPALVKRQQE------EYSGRLDNLSN--------QLEILVRQIQQ 216

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 DL +K++ L   +    ++L + + L +K  V + +L + ER V  +  EL   
Sbjct: 217 RQQEIDDLASKTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLERAVNDAQGEL--- 273

Query: 234 IHEQKNMLR----HINELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEK 285
                N LR     +    DEA L+       Y  ++   L + Q T    M++  +  +
Sbjct: 274 -----NSLRLLRPKLKAALDEAILKRREAVFVYAADLRAQLNETQ-TRLSRMNEAQVGAQ 327

Query: 286 TREQKTIL-SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
            +  K I+ SP+ GTI      +     Q    +++IVP      I  K+ PK I  +  
Sbjct: 328 DKVSKAIITSPVNGTIKTVHINTLGGVVQPGVDIIEIVPSEDQLLIETKILPKDIAFLHT 387

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           G  A V+   Y   R    K  +E I    SQ +  
Sbjct: 388 GLPAVVKVTAYDFTRYGGLKGTVEHISADTSQDEEG 423


>gi|298490885|ref|YP_003721062.1| secretion protein HlyD family protein ['Nostoc azollae' 0708]
 gi|298232803|gb|ADI63939.1| secretion protein HlyD family protein ['Nostoc azollae' 0708]
          Length = 522

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M  L ++   G + W+    +E  V ++G++  E  V E+++P +G++K   V++G  + 
Sbjct: 60  MITLMVVACFG-VGWAYFSKLEQVVPATGQLKPEGTVKEVQAPINGVVKSVYVKDGQTVK 118

Query: 80  QGTPLLTFEDIET-TDLIDLKKVSI 103
           +G  +LTFE + T  +L  L K+ +
Sbjct: 119 KGDLILTFESVATLAELSSLNKIRV 143


>gi|187939501|gb|ACD38650.1| membrane fusion protein cluster 3 protein [Pseudomonas aeruginosa]
          Length = 471

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 68/346 (19%), Positives = 149/346 (43%), Gaps = 38/346 (10%)

Query: 17  LKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           L R    +I+  + L + W+ L  I++  S+ G+++       I+     ++K   V +G
Sbjct: 52  LARHIKWAIMAFLALAVLWACLGEIDVVASAQGKVVPSGKTKVIQPSEVAVVKAIHVYDG 111

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            Q+  G  L+  +  +TT   D++++    +   +D+ ++          VL +A E  +
Sbjct: 112 QQVKAGDLLVELDGSQTT--ADVERLKSDLMAAQVDSARAT---------VLLEAIEGGQ 160

Query: 136 E--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           E   +   L + +    +     +   Y  L+  + + +++      +E +S+ ++A LS
Sbjct: 161 EPASIASRLPQANEEQQRAAQVWMQGQYLELRSNINQAQAV------IEQRSAEIQAALS 214

Query: 194 ---SHQKDLTMM-------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
              S +K L +        K L  +N V+++   ++E    +S L+    +  Q+  L  
Sbjct: 215 MIASLRKTLPIAEQLAQDYKRLLARNFVAKHAWLEKE----QSRLDQERELAVQQAKLLE 270

Query: 244 INELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGT 299
           +     EA     + + +  R   DL+   +  +  +++  +  + R++ T L +P+ GT
Sbjct: 271 LQASRREAEQRRESIIAQTRRTMLDLQHESQQKSAALTQELLKAEQRDRLTRLTAPVDGT 330

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           +      +      ++QPLM IVP  +   + A +  K I  V  G
Sbjct: 331 VQQLAIHTQGGVVTEAQPLMAIVPKDQPVEVEAMLENKDIGFVGPG 376


>gi|117618037|ref|YP_855894.1| RTX toxin transporter [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117559444|gb|ABK36392.1| RTX toxin transporter [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 454

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/360 (20%), Positives = 154/360 (42%), Gaps = 34/360 (9%)

Query: 9   LKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L    P+   R+T L++  G++  + W+    ++I  ++SG +L       I+S     +
Sbjct: 32  LAETPPSPFARITALTLSAGVLLTLLWACWGELDIQATASGRLLVLGRSQMIQSYEQARV 91

Query: 68  KKFQVENGSQILQGTPLLTFEDIETT-DLIDLKKVSIKNLRCHIDTEKSALDFLNNKY-D 125
               VE+G  +    PLLT   +  + DL  L++      +  I  +    D   +++ D
Sbjct: 92  VSIHVEDGQAVAADAPLLTLNTLGVSQDLSRLRQQQAFQYQTLIRYQSLYRDQTPDQHPD 151

Query: 126 VLEKAFESREEQLLDF---LGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            L    E ++  + ++   L ++HST   +    G++   ++ +            R D+
Sbjct: 152 YLRLTPEQQQALVENYQSELHEFHSTLGNLQAELGVNQANQAAR------------RGDM 199

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            +    L  LL++ +  L   + L + +A+S+ +  +QE    K  LE +  + +Q+  L
Sbjct: 200 AS----LTTLLANIRPRLQARQTLSQSHAISRVEYLEQE----KELLETQRQLAQQRAEL 251

Query: 242 RHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQK---TILSPIA 297
             +           A +  +  R+ +E+ Q+      +    L K RE++    I +P+A
Sbjct: 252 EVLQSQQQSLQERLAGFKAQKQREWIEKRQQARLQLTAIEQELAKLREREHLEVIRAPVA 311

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           GT+      +     Q +Q L+ IVP+  +     K+  K I  V +G   +++   FP+
Sbjct: 312 GTVQQLAIHTQGAVVQPAQQLLVIVPNEGVQLAEVKILNKDIGFVHEGQAVSIKVDAFPY 371


>gi|238798318|ref|ZP_04641802.1| HlyD family secretion protein [Yersinia mollaretii ATCC 43969]
 gi|238717865|gb|EEQ09697.1| HlyD family secretion protein [Yersinia mollaretii ATCC 43969]
          Length = 446

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 85/436 (19%), Positives = 177/436 (40%), Gaps = 59/436 (13%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL   G IG + W+ L P++  ++  G I+  +N   I+    G I++  V  G ++ +G
Sbjct: 36  LLIFGGFIGFLLWAGLAPLDKGIAVMGHIVVAENRKVIQPLQGGRIQQLHVGEGDEVTEG 95

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK-SALD----FLNNKYDVLEKAFESR-- 134
             L+T           L   +I++ R ++  +  SAL      +  ++D+ E  F     
Sbjct: 96  QLLIT-----------LDDTAIRSHRDNLQHQYLSALAQESRLIAEQHDLPEIHFPEALL 144

Query: 135 EEQLLDFLGKYHSTCSKVFNY----GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           ++     + +      ++F +     +S + R L  ++TR +S          + S L+ 
Sbjct: 145 QDPAQQVVERITVLQQQLFQHRRQAQLSEIAR-LSAQITRHQS----------RQSGLQV 193

Query: 191 LLSSHQKDLTM-------MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           L  ++Q+ L +       +++L +   V++N L   ER      + LR  + +  + +  
Sbjct: 194 LRDNNQQQLDLFQQQLDGVQSLAKNGHVAKNQLLDMER----QAISLRTRVEQDASDIAE 249

Query: 244 INELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
             +L DE     +     Y  E    L + Q++  +   +L++ E   +   I++P++G+
Sbjct: 250 AYKLIDETEQHISQRHEQYQSENREQLAKAQQSTQELTQRLSVAEYELDNTRIIAPVSGS 309

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I+     +        Q LM++VP  +   + A++    I     G    + F  +    
Sbjct: 310 IIALAQHTVGGVVSSGQTLMELVPSGQPLLVEAQLPVALIDKAMVGLPVDLNFSAFNQST 369

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFT 416
             +    + +I     Q    L+   YY + + I      D N   +++R G   +V   
Sbjct: 370 TPRLYGSVLRIGADRIQHPQTLEP--YYPLTIAI------DTNQTPLKIRPGMSVDVFIR 421

Query: 417 AKNTTLAQEIIHPITD 432
               +L   +  P+TD
Sbjct: 422 TGERSLLNYLFKPLTD 437


>gi|28901588|ref|NP_801243.1| HlyD family secretion protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153838203|ref|ZP_01990870.1| secretion protein, HlyD family [Vibrio parahaemolyticus AQ3810]
 gi|260900141|ref|ZP_05908536.1| secretion protein, HlyD family [Vibrio parahaemolyticus AQ4037]
 gi|28810135|dbj|BAC63076.1| secretion protein, HlyD family [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748403|gb|EDM59262.1| secretion protein, HlyD family [Vibrio parahaemolyticus AQ3810]
 gi|308110044|gb|EFO47584.1| secretion protein, HlyD family [Vibrio parahaemolyticus AQ4037]
 gi|328469516|gb|EGF40462.1| HlyD family secretion protein [Vibrio parahaemolyticus 10329]
          Length = 463

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 85/447 (19%), Positives = 184/447 (41%), Gaps = 48/447 (10%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + ++  +  I W+    I+      G+++    +  +++   G++K+  
Sbjct: 27  NTPNSARLMLWVMVLFFVAAIGWASWAQIDQVTVGQGKVIPSSQIQVVQNLEGGLVKEIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +G  LL  +D         ++  + NL   +    ++++ +    D   + +
Sbjct: 87  VKEGQLVKKGQQLLLIDDTRFRSDYREREQQVANLTASVLQLSASINSVAVNRDFNIQDW 146

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYG---ISSVYRSLKMKLT-RMRSIYLNRLD-LENKSS 186
           E                 S V +YG      V    + +LT R ++ Y   LD L N+ S
Sbjct: 147 EK----------------SVVLDYGKLTFPPVLEETQPQLTQRQKAEYREDLDNLRNQLS 190

Query: 187 LLRALLSSHQKDL----TMMKNLFEKNAVSQNDLN-----QQERIVYK-STLELRENIHE 236
           ++   +   Q+DL      ++NL +    ++ +L+       E +V +   L+L+  +++
Sbjct: 191 VIDQQVEQKQQDLVEIEARVRNLRQSYQYAKKELDITQPLADEGVVPRIELLKLQRQVND 250

Query: 237 QKNMLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEK 285
            +  +         I     E+ L   +   +   + ++      D++S L      LE 
Sbjct: 251 TRREMTSSELKIPVIKSAIKESMLNRIDVALKFRSEQQEKLNNAQDQLSALVESAVGLED 310

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              +  ++SP+ G I      +     Q    +++IVP      + AK+ PK I  ++  
Sbjct: 311 RVNRTVVVSPVTGKIKTLNVNTVGGVIQPGMDIVEIVPTEDTLLVEAKIAPKDIAFLRPN 370

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIE 404
             A V+F  Y D    K+  ++ +++ I +    + +   +Y V ++    +F  D ++ 
Sbjct: 371 LNAIVKFTAY-DF--TKYGGLVGELEHISADTTQDEEGNSFYIVRVRTEKTSFGQDADLP 427

Query: 405 LRNGFPAEV-LFTAKNTTLAQEIIHPI 430
           +  G  A V + T K T L + ++ PI
Sbjct: 428 IIPGMTASVDIITGKRTVL-EYLLKPI 453


>gi|229521546|ref|ZP_04410965.1| membrane-fusion protein [Vibrio cholerae TM 11079-80]
 gi|229341644|gb|EEO06647.1| membrane-fusion protein [Vibrio cholerae TM 11079-80]
          Length = 467

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 73/377 (19%), Positives = 160/377 (42%), Gaps = 50/377 (13%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +  PLLT + +            I  L    + + + 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKDAPLLTLDTLGVNQ-------DITRLVSQAEFQTNE 146

Query: 117 L----DFLNNK---YDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           L      LN++   +D +  A  + ++ L+  ++L + +      F+  ++S+   +K+ 
Sbjct: 147 LIRYRTLLNDQLLTHDPMFTALPAEQQALIHENYLSEKNE-----FDSTLASITAEMKV- 200

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                    NR     + S + ALL   +   + L   K L +   +   +  +QE    
Sbjct: 201 ---------NRTSQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQE---- 247

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-L 283
           K  LE +  + +Q+  L  +   Y+        +  +  R+  + +R    +++ L   L
Sbjct: 248 KELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQEL 307

Query: 284 EKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            K RE++    I SP+ GT+     ++     Q +Q LM IVP +++     ++  K + 
Sbjct: 308 SKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVG 367

Query: 341 HVKKGYTATVR---FPH 354
            V  G + TV+   FP+
Sbjct: 368 FVYPGQSVTVKVDAFPY 384


>gi|218671582|ref|ZP_03521252.1| protein secretion protein, HlyD family [Rhizobium etli GR56]
          Length = 310

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 5/180 (2%)

Query: 261 EISRDLEQNQRTFAD-EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           EI+++L   +   A+ E  + T L++ R +  I +P++G +      + +   +  Q LM
Sbjct: 131 EIAKELTDVEAKIAENEERRETALDQLR-RLDITAPLSGRVHELAVHTVNGVIEPGQTLM 189

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +VP +    ++A V  + I  +  G +  VRF  +        +A+I  I P I + + 
Sbjct: 190 LVVPENDDLTVQANVATRDIDQLHVGQSVDVRFSAFDQRTTPDVRAVITSIAPDIVKDER 249

Query: 380 NLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
              +  YY + +K    + +   +I+L  G PAEV     + T+   +  P+TD    +F
Sbjct: 250 TGIS--YYPLRVKPEAQSIAKLKSIKLYPGMPAEVFIKIADRTVISYLTKPLTDQMQHVF 307


>gi|308094929|ref|ZP_05892779.2| secretion protein, HlyD family [Vibrio parahaemolyticus AN-5034]
 gi|308095060|ref|ZP_05903288.2| secretion protein, HlyD family [Vibrio parahaemolyticus Peru-466]
 gi|308125571|ref|ZP_05776008.2| secretion protein, HlyD family [Vibrio parahaemolyticus K5030]
 gi|308089394|gb|EFO39089.1| secretion protein, HlyD family [Vibrio parahaemolyticus Peru-466]
 gi|308092284|gb|EFO41979.1| secretion protein, HlyD family [Vibrio parahaemolyticus AN-5034]
 gi|308112386|gb|EFO49926.1| secretion protein, HlyD family [Vibrio parahaemolyticus K5030]
          Length = 464

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 85/447 (19%), Positives = 184/447 (41%), Gaps = 48/447 (10%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + ++  +  I W+    I+      G+++    +  +++   G++K+  
Sbjct: 28  NTPNSARLMLWVMVLFFVAAIGWASWAQIDQVTVGQGKVIPSSQIQVVQNLEGGLVKEIL 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +G  LL  +D         ++  + NL   +    ++++ +    D   + +
Sbjct: 88  VKEGQLVKKGQQLLLIDDTRFRSDYREREQQVANLTASVLQLSASINSVAVNRDFNIQDW 147

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYG---ISSVYRSLKMKLT-RMRSIYLNRLD-LENKSS 186
           E                 S V +YG      V    + +LT R ++ Y   LD L N+ S
Sbjct: 148 EK----------------SVVLDYGKLTFPPVLEETQPQLTQRQKAEYREDLDNLRNQLS 191

Query: 187 LLRALLSSHQKDL----TMMKNLFEKNAVSQNDLN-----QQERIVYK-STLELRENIHE 236
           ++   +   Q+DL      ++NL +    ++ +L+       E +V +   L+L+  +++
Sbjct: 192 VIDQQVEQKQQDLVEIEARVRNLRQSYQYAKKELDITQPLADEGVVPRIELLKLQRQVND 251

Query: 237 QKNMLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEK 285
            +  +         I     E+ L   +   +   + ++      D++S L      LE 
Sbjct: 252 TRREMTSSELKIPVIKSAIKESMLNRIDVALKFRSEQQEKLNNAQDQLSALVESAVGLED 311

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              +  ++SP+ G I      +     Q    +++IVP      + AK+ PK I  ++  
Sbjct: 312 RVNRTVVVSPVTGKIKTLNVNTVGGVIQPGMDIVEIVPTEDTLLVEAKIAPKDIAFLRPN 371

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIE 404
             A V+F  Y D    K+  ++ +++ I +    + +   +Y V ++    +F  D ++ 
Sbjct: 372 LNAIVKFTAY-DF--TKYGGLVGELEHISADTTQDEEGNSFYIVRVRTEKTSFGQDADLP 428

Query: 405 LRNGFPAEV-LFTAKNTTLAQEIIHPI 430
           +  G  A V + T K T L + ++ PI
Sbjct: 429 IIPGMTASVDIITGKRTVL-EYLLKPI 454


>gi|188581791|ref|YP_001925236.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium populi BJ001]
 gi|179345289|gb|ACB80701.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium populi BJ001]
          Length = 437

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 75/418 (17%), Positives = 165/418 (39%), Gaps = 20/418 (4%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           +GL  W+    +  +V + G ++ +  V +++ P  G++ + +V +G  +  G  ++  +
Sbjct: 29  VGLGGWAATTELAGAVVAPGTLVVDSFVKKVQHPTGGVVGELRVRDGDLVRAGQVVMRLD 88

Query: 89  DIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           +  T     ++D     +   +  ++ E+     ++    +  +A    E       G+ 
Sbjct: 89  ETVTRANLAVVDKSLAELTARQGRLEAERDGAPRVSFAAVLRGRAQGDPE------AGRV 142

Query: 146 HSTCSKVFNY---GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            +  +++F       +     LK +  ++R        L  + +  R       ++L  +
Sbjct: 143 MAGETRLFELRRDARAGQKAQLKERTGQLREEIQG---LTGQIAGKRRETELINRELEGV 199

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           ++L+ KN V    +   ER   +   E  + +         I+E   +      +   E+
Sbjct: 200 RDLWRKNLVPIQRVTALERDAARLEGEHGQLVASVAQAKGKISETELQVIQVDQDLRSEV 259

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           +++L + Q   A+ + K    E   ++  I +P  G +      +        +P+M IV
Sbjct: 260 AKELSEVQGKIAELVEKRVAAEDQLKRIDIRAPQDGMVHQLAVHTIGGVVSPGEPIMLIV 319

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P +    I AKV PK I  V+ G  A +R   +    ++    I   +  + + Q  + +
Sbjct: 320 PRADTLVIEAKVAPKDIDQVRLGQKAVLRLTAF---NQRTTPEIEGTVSLVAADQITDEK 376

Query: 383 TQ-EYYEVILKI-TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           T   +++V +K   D       I+L  G PAEV       T+   +  P+ D   + F
Sbjct: 377 TGTSFFKVHVKPEPDHVARLKGIKLVPGMPAEVFIQTGERTVLSYLTKPLNDQVRRAF 434


>gi|255264262|ref|ZP_05343604.1| type I secretion membrane fusion protein, HlyD [Thalassiobium sp.
           R2A62]
 gi|255106597|gb|EET49271.1| type I secretion membrane fusion protein, HlyD [Thalassiobium sp.
           R2A62]
          Length = 389

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 80/405 (19%), Positives = 157/405 (38%), Gaps = 74/405 (18%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            I W+    I+  V + GEI++      I++   GI+ +  V  G  +L G  L   E  
Sbjct: 29  FIAWAAFAWIDEIVRADGEIVSSSRPEIIQNLEDGILAEMMVSEGDIVLPGDVLARLEST 88

Query: 91  E----TTDLID-LKKVSIKNLRCHIDTEKSALDFL-NNKYDVLEKAFESREEQLLDFLGK 144
                  D+ D +  + I+ LR   + E    DF+  N+    + A  + E  LL+    
Sbjct: 89  RFQTAANDIQDQIYSLDIRRLRLEAELE-GQFDFIVPNELSTRQPAIVASERALLN---- 143

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                                            + D ++K    + +L+  + +L +M++
Sbjct: 144 -------------------------------ARQSDYDSKVRGAKGILTEARCELDLMED 172

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           +  +  V+  ++    +    S  E++             NE+  +  LE A    +  +
Sbjct: 173 MLNREVVALIEVTCARK--AHSDAEIK------------FNEIITKTELERAGSYSDTPK 218

Query: 265 DL---EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMK 320
           +L    Q+ R   D++S+            I SP+ G IV N   ++     +  + + +
Sbjct: 219 ELATLRQDARIAQDQLSR----------TLITSPMRG-IVNNLGVTTIGGVVRPGEEIFQ 267

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           I+P  +  ++ A+V P+ I +V +G  AT++   Y        K  +  I     + +  
Sbjct: 268 IIPMDEELFVEAQVKPEDIANVVRGQDATIKLSAYDYTIYGSLKGAVHLISGDTFKDERK 327

Query: 381 LQTQEYYEVILKITDLAFSDNN--IELRNGFPAEV-LFTAKNTTL 422
                +Y+V L++     +D    I++R+G  A V L T + T L
Sbjct: 328 PDGDPHYKVTLRVDLSQLTDRQQMIDIRSGMLASVELHTGERTVL 372


>gi|222087759|ref|YP_002546296.1| protein secretion protein [Agrobacterium radiobacter K84]
 gi|221725207|gb|ACM28363.1| protein secretion protein [Agrobacterium radiobacter K84]
          Length = 436

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 87/440 (19%), Positives = 179/440 (40%), Gaps = 35/440 (7%)

Query: 16  SLKRMTLLSI------IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +++R+T ++I      +G++G +  +I L  + +V ++G ++ +  V  ++    G + +
Sbjct: 12  AIRRLTFVAITAIIFLVGVLGGLAATIRL--QGAVIAAGTLVVDSYVKPVQHQKGGTVGQ 69

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLID-----LKKVSIKNLRCHIDTE-KSALDF---L 120
             V+NG ++  G  L+  +D +    +      LK+++ +  R   + + K  + F   L
Sbjct: 70  VFVKNGDRVEPGQILIHLDDTQARANLAIVSKRLKELAARTARLSAERDSKEDITFPEGL 129

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             + +++E A     EQ L     +H   S       S + R  ++   R+R +      
Sbjct: 130 LKEREIVEVAAMLDGEQRL-----FHDRRS-------SKMGRKAQLA-ERVRQLSKEAEG 176

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L  +    R  ++   K+LT ++ L ++  +    +   +R     T EL   I      
Sbjct: 177 LSAQQDGKRQAIAIINKELTSLQPLLDQGIIPATRVYNLQRDAADLTGELGSLIASAAQT 236

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              I E   +      +   E+S  L Q +    +   +    E       I +P AG +
Sbjct: 237 NGKIAETQLQIIQVDDDQRTEVSDQLRQAESEIGEYSERFVAAEDELRHIDIRAPQAGIV 296

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 +S      S+ +M+IVP + +     K++P+ I  V  G   T+RF  +     
Sbjct: 297 HQLAVHASGAVVTPSEAIMQIVPDNDVLTPELKLSPQDIDQVVVGQDVTLRFSAFNQRTT 356

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLF-TAK 418
            +    I +I   ++   +    Q YY + + ++   ++   N+    G P E    T +
Sbjct: 357 PELSGRITRIAADLTT--DQRTGQGYYSLRVAVSATEWARLGNLAPVVGMPVEAFIQTGE 414

Query: 419 NTTLAQEIIHPITDNWPKIF 438
            T LA  +  P+TD   + F
Sbjct: 415 RTALAY-LAKPLTDQMARAF 433


>gi|9438190|gb|AAF87591.1|AF286062_4 AprE [Pseudomonas brassicacearum]
          Length = 438

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 74/420 (17%), Positives = 158/420 (37%), Gaps = 26/420 (6%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L+++G     TW+ L P++  +   G ++       ++S  SG++ +  V  G  + QG 
Sbjct: 26  LALVGAGSFFTWASLAPLDQGIPVQGTVVVSGKRKAVQSMSSGVVSRILVREGEVVKQGQ 85

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD-VLEKAF--------ES 133
           PL   +  +           +++L+       ++L    ++ D +L+ +F        + 
Sbjct: 86  PLFRLDQTQAA-------ADVQSLQAQYRMTWASLARWQSERDNLLQVSFPAELSRDPDP 138

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R   +L+   +  S+  + F    +++  +++    ++  +   R DL  ++  LR  L 
Sbjct: 139 RLALVLEGQRQLFSSRREAFAREQAALRANIEGAAAQLAGMRRARSDLTAQAESLRLQLG 198

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           +       ++ L +   + +N L   +R + +   EL +N  E   + + I E   +   
Sbjct: 199 N-------LQPLADNGYIPRNRLLDYQRQLSQVQQELAQNSGESGRVEQGIVESRLKLQQ 251

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               Y KE+   L   Q        +L       +   IL+   G  V     +     +
Sbjct: 252 HHEEYQKEVRSQLADAQLKSETLQQQLKSAGFELQHSEILATADGIAVNLGVHTEGAVVR 311

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           Q   L++IVP      +   +    I  V       + F  +   R  +    +  I   
Sbjct: 312 QGDTLLEIVPQGTRLEVEGHLPVHLIDKVGPHLPVDILFTAFNQNRTPRVPGEVSLIS-- 369

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
             Q  +      YY +   ++D+A    N + ++ G PAE+       +L   +  P+ D
Sbjct: 370 ADQMLDEKTGAPYYVLRSSVSDVAMDKLNGLVIKPGMPAEMFVRTGERSLLNYLFKPLLD 429


>gi|238653887|emb|CAV30831.1| Type I secretion membrane fusion protein, HlyD
           [magnetite-containing magnetic vibrio]
          Length = 456

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 66/385 (17%), Positives = 159/385 (41%), Gaps = 38/385 (9%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +R+  L+ + ++    W+ L  ++I+  + G+++    +  I+    GI+++  V+ G  
Sbjct: 43  RRLVRLTALTMLLFTVWAALFELDIAAHAPGKVVPAGQMKRIQHLEGGIVREIHVKEGEV 102

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVS--IKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           +  G PL+  E   T    DL+++   I  L+ +    ++ LD            F +  
Sbjct: 103 VKVGQPLVELES--TASEADLQEIETRIGTLKVNAIRLQAQLDGAKGLV------FPA-- 152

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
               + +  Y +  +        +++R+ + +L  + ++    L ++ + + L  + +  
Sbjct: 153 ----ELIATYPNQIASA-----RAMFRAQRDRL--ISAVSEQELKIKQREAELAEIGTRL 201

Query: 196 QKDLTMMKNLFEKNAV-----SQNDLNQQERI-VYKSTLELRENIHEQKNMLRHINELYD 249
              +   K L E+ A+     SQ  +N+ E + + K    LR  I E +  L  +    +
Sbjct: 202 SHSVGRHKILSEQVAINQKLLSQGLMNEYEHLELRKEEQSLRGGIAESRAALGRLKAALE 261

Query: 250 EANLEFANYL----KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           + N+   +      +++ ++L +  R  A+   ++     +R + TI +PI G ++    
Sbjct: 262 QENVALQSLRLGEDEQLRKELGETSRELAEFSERVRKFADSRARTTIRAPIDGAVMTLYV 321

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +          ++ +VP      +  ++   ++  V+ G  A ++    A         
Sbjct: 322 VTEGGVVAPGGTVLSMVPGGDRLVVEVRLPVGEVGFVRPGQRARLQLVSTAGRGFSPLDG 381

Query: 366 IIEKIDP-IISQQDNNLQTQEYYEV 389
            + +I P  I++QD     Q +Y V
Sbjct: 382 KVTQISPDSIAEQDQ----QPFYLV 402


>gi|92112187|ref|YP_572115.1| Type I secretion membrane fusion protein, HlyD [Chromohalobacter
           salexigens DSM 3043]
 gi|91795277|gb|ABE57416.1| Type I secretion membrane fusion protein, HlyD [Chromohalobacter
           salexigens DSM 3043]
          Length = 395

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 78/403 (19%), Positives = 157/403 (38%), Gaps = 73/403 (18%)

Query: 13  HPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           HP  L R  + ++ + ++  I WS    I +     G ++    +  I+S   GII + +
Sbjct: 23  HP--LARPVVWAVLVCLLSFIGWSAWAHIAVVTHGEGRVIPVSRIQSIQSLEGGIIDELE 80

Query: 72  VENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           V  G  + +G  L+            ET + +   K +I  L+  +  E  ++DF     
Sbjct: 81  VREGDIVDKGQLLVKLSGTRFRSAYQETENQVQALKAAIARLQAEV-LEADSIDF---PA 136

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DV  ++  +R E+ L     +H+   K       S+   ++M   R              
Sbjct: 137 DVDAQSSLARSEREL-----FHARREK-LREATGSLDHEIQMASRR-------------- 176

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                         L +++ L E+ AVSQ +           +L+L+++I   +     I
Sbjct: 177 --------------LNLIQPLVERKAVSQME-----------SLQLQQDIASLRGKRAEI 211

Query: 245 NELY-DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVY 302
              Y  +A  E  +   E+S  LEQ           + +  + + Q+T L SP+ G +  
Sbjct: 212 QNSYVQDAYTELTDKKGELS-SLEQ-----------VLVQRQDQYQRTELNSPVHGRVNA 259

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +        + +M+++P      + AK+ P+ +  +  G  A+V+   Y       
Sbjct: 260 INYTTRGGVVPPGETIMEVIPLEDQLLLEAKIKPQDVAFLAPGMPASVKITAYDYTIYGD 319

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            +  +E+I     +++    T+ YY+V ++    + + N  +L
Sbjct: 320 LEGTVEQISADTIEEETPRGTESYYKVYIRTESGSLTHNGKDL 362


>gi|325276531|ref|ZP_08142284.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           sp. TJI-51]
 gi|324098339|gb|EGB96432.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           sp. TJI-51]
          Length = 458

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 97/443 (21%), Positives = 175/443 (39%), Gaps = 68/443 (15%)

Query: 19  RMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           R+  L+I G+I     LI W+ + PI+      G+ +    V +I++   GI+ +   + 
Sbjct: 42  RVVRLTIWGVILFFVFLIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGIVAEIFAKE 101

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY---DVLEKA- 130
           G  +  G PLL  +  ET    ++ +     L   +  E+ + +  ++     + L KA 
Sbjct: 102 GQIVEVGQPLLRLD--ETRFASNVGETEADRLAMALRVERLSAEVQDSPLKIDEALRKAA 159

Query: 131 ----------FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                     ++SR +QL D +G       +               + +  R+ Y N L+
Sbjct: 160 PSQAASEESLYQSRRQQLQDEIGGLQQQLVQRQQE---------LREYSSKRAQYANSLE 210

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN---IHEQ 237
           L      LR       K+++M + L    A+SQ ++ +  R   ++  +L      I   
Sbjct: 211 L------LR-------KEISMSEPLVATGAISQVEVLRLRRAEVENRGQLDSTALAIPRA 257

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQ--NQRTFADEMSKLTILEKTREQKT---- 291
           +  +R +    +E   +F       S  L Q    RT   E++K T   K  + +     
Sbjct: 258 EAAIREVQSKIEETRGKFR------SEALTQLNEART---ELNKATATSKALDDRVNRTL 308

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + SP+ G +      +     Q    ++++VP      I AK+ PK I  +  G  ATV+
Sbjct: 309 VTSPVRGIVKQLLVNTIGGVIQPGSDIIEVVPLDDTLVIEAKILPKDIAFLHPGQEATVK 368

Query: 352 FPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRN 407
           F  Y        KA +E+I    I+ +D       YY + L+ TD   L   +  + +  
Sbjct: 369 FTAYDYTIYGGLKAKLEQIGADTITDEDKKTT---YYLIKLR-TDRSHLGTDEKPLLIIP 424

Query: 408 GFPAEVLFTAKNTTLAQEIIHPI 430
           G  A V       T+   ++ PI
Sbjct: 425 GMVATVDIMTGKKTIMSYLLKPI 447


>gi|188025796|ref|ZP_02959847.2| hypothetical protein PROSTU_01746 [Providencia stuartii ATCC 25827]
 gi|188020530|gb|EDU58570.1| hypothetical protein PROSTU_01746 [Providencia stuartii ATCC 25827]
          Length = 448

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 107/458 (23%), Positives = 186/458 (40%), Gaps = 64/458 (13%)

Query: 3   HFMWKNLK--RNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEI 59
           HF+  +L   ++ P+ L   T + I IGI+  I WS +  ++I  ++ G ++       I
Sbjct: 18  HFLPSHLALLKSPPSYLALTTAIIISIGILFAIIWSYIGKLDIQATTQGRLVVSGRTQVI 77

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSA 116
           ++     ++   V +G  + QG PLL      + +++ + +  I NL   I     EK  
Sbjct: 78  QAFELSRLQHIYVADGQHVKQGDPLL------SVNVLGINQ-DIHNLNYQIHFQQIEKWV 130

Query: 117 LDFLNNKYDV-----LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              L N+          K   + +++LL+                    Y+SLK +   +
Sbjct: 131 HHALLNQISPELTPEFAKLLPTEQQRLLE-------------------SYQSLKNEYDAL 171

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL---FEKNAVSQNDLNQQERIVYKSTL 228
               LN +D  N+ +L R   S+ +++L  +  L    +K   +   LN Q+ I  K  L
Sbjct: 172 ----LNEID--NEITLNRTHYSARERELKDVNTLIINIQKRLDAHRVLNNQQLISQKEFL 225

Query: 229 EL-RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT------FADEMSKLT 281
           E  RE +  +K     ++EL   A L   +      R   Q Q+T      +     KL 
Sbjct: 226 EQERELLMAKKEKTSKLSEL---AILNSQHSALHEKRHRLQTQKTQEWYEKYRQAEFKLV 282

Query: 282 ILE------KTREQ-KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
             E      + REQ K I SP+ GT+    +++     Q +Q LM +VP++ +     K+
Sbjct: 283 SAEQELLKNQEREQLKIIRSPVDGTVQQLATYTLGAVLQPAQQLMVVVPNNDVQLAEVKI 342

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             K I  +++G  ATV+   +   R       +  I    S QD  L      ++ LK  
Sbjct: 343 LNKDIGFIREGQLATVKIDAFPYTRYGTIDGEVISISR-DSTQDEQLGLVFLGQIGLKKK 401

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            L    N+IEL  G         +   +   ++ PI +
Sbjct: 402 SLLVEGNHIELTPGLSVTAEIKTEKRRVIDYLLSPIQE 439


>gi|159186155|ref|NP_356240.2| ABC transporter, membrane spanning protein (bacteriocin)
           [Agrobacterium tumefaciens str. C58]
 gi|159141289|gb|AAK89025.2| ABC transporter, membrane spanning protein (bacteriocin)
           [Agrobacterium tumefaciens str. C58]
          Length = 434

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 78/453 (17%), Positives = 182/453 (40%), Gaps = 45/453 (9%)

Query: 6   WKNLKRNHPASL--KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           W+ L+R+  + L    +  L++ G+ G   W++   I  +V + G ++ E ++ +++ P 
Sbjct: 4   WQALRRSIRSHLLVGGLGFLTLTGVFG--GWAVGTEIVGAVIAQGSLVVETSLKKVQHPV 61

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTD-----LIDLKKVSIKNLRCHIDTEKSA-L 117
            G++ +  V +G ++  G  ++  +   T       +  L + + +  R   + +++A +
Sbjct: 62  GGVVSELMVRDGDRVKAGDVVMRIDATMTRANLAIVVKSLDQFTARKARLEGERDRAASV 121

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            F  +  D   +A ++    +++   + +     V      S  R L+ ++ ++R   ++
Sbjct: 122 VFPQSLRD---RAGDAEVLAMMNAEQRLYEDRRAVRE----SKKRQLEQRVRQLRD-EIS 173

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            L+ E  +++    +   +  L   ++L E+  + ++ L+  ER       ++  +I   
Sbjct: 174 GLEAERAANVREQGMVDEE--LIRFRSLQERGLLDKSRLSTLER----QATDIDGDIGRL 227

Query: 238 KNMLRHINELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +  +  I     E  L+       + +E+  DL +      + + +    E   ++  IL
Sbjct: 228 RAGIAGIEAKISETALQILQIDEQWSEEVGSDLREMDARIGEYVERRVAAEDQLKRVDIL 287

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +      +        + +M IVP      + AKV P+ I  +  G    +RF 
Sbjct: 288 APQDGVVHQLAVHTVGGVIAPGEQIMMIVPEVDKLVVEAKVAPQDIDQIYFGQVTNLRFS 347

Query: 354 HYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE------L 405
            +      +    +E+I  D  + Q+        YY     +  +A S   I+      L
Sbjct: 348 AFNQKTTPEITGTVERISADVTVDQRTGA----SYY-----LVRVATSQEQIKRLGEFSL 398

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             G P E   T    ++    + P+ D   + F
Sbjct: 399 MPGMPVEAFITTGERSVLSYFLKPLLDQANRTF 431


>gi|227325951|ref|ZP_03829975.1| protease secretion protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 340

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/296 (18%), Positives = 126/296 (42%), Gaps = 37/296 (12%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD-------LTMMKNLFEKN 209
           + S  +SLK++   MRS       +E   S  R ++SS QK        L  +++L  +N
Sbjct: 53  LHSRQQSLKLEAEGMRSSIAG---MEASLSAQRQVMSSKQKQRETLEQQLQGLRSLAAEN 109

Query: 210 AVSQNDLNQQERIVYKSTLEL----------RENIHEQKNMLRHINELYDEANLEFANYL 259
            V +N + + ER++ +   ++          R +I +Q  ++    + YD          
Sbjct: 110 YVPRNKMLENERLLAQLNGDIAQLAGDINRTRRDIEQQTLLIAQRQQEYD---------- 159

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           KE++ +L   +   +D  SK    +       + +P++GT+V  + F+        Q L+
Sbjct: 160 KEVNSELADVRALLSDVGSKKEKADFNLANIQMRAPVSGTVVGLKVFTEGGVIAPGQTLL 219

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQ 377
           +IVP  +  ++ A++  + +  V  G    ++F  +      +    +E +  D ++ ++
Sbjct: 220 EIVPDDQPLFVDARLPVELVDKVWPGLPVELQFVAFNQSTTPRVAGTVELLSADRLLDER 279

Query: 378 DNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           D +     YY + +++ +    +   +E++ G P +        +    +  P+ D
Sbjct: 280 DGS----PYYSLRVQVDEAGKRALEGLEVKPGMPVQGFVRTGERSFVNYLFKPLMD 331


>gi|296102133|ref|YP_003612279.1| Lipase secretion C [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295056592|gb|ADF61330.1| Lipase secretion C [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 437

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 12/253 (4%)

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           ALL+   KDL   K L E+    +N   D+  Q   +     E R  I E  N    I +
Sbjct: 190 ALLNRQLKDL---KPLMEEGYFPRNRYLDIQVQSASLAGEVGETRSKIVELGN---QIAQ 243

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L         +  K+I   ++Q +   ++   +LT+         +++P  G ++     
Sbjct: 244 LKRGMQQRLIDNRKDIETQIDQLRLQVSESKKQLTLSGVDLSLTRVVAPQDGVVMNLALA 303

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S S      + L++IVP +    I +++    I  V KG   T+ F  +      K  A 
Sbjct: 304 SDSAVVSAGEQLLEIVPQASPLIIDSQIDVALIDKVHKGMPVTLMFTAFNQQSTPKIPAR 363

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  +     +Q +    Q YY++ + +T        + E++ G P EV   A   +L   
Sbjct: 364 VSLVS--ADRQTDPTTQQPYYKIQIAVTPEGMKKLKSEEVKPGMPVEVFIKAGERSLLSY 421

Query: 426 IIHPITDNWPKIF 438
           ++ PI D   + F
Sbjct: 422 LLKPIVDRASRSF 434


>gi|21242936|ref|NP_642518.1| hemolysin secretion protein D [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21108437|gb|AAM37054.1| hemolysin secretion protein D [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 491

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 78/420 (18%), Positives = 162/420 (38%), Gaps = 47/420 (11%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           HPA  +   L+  +  I L+ WSI   I+I   + G I+  D    ++   + ++++  V
Sbjct: 64  HPAPRRLAWLVMALFAIALV-WSIFGRIDIVAVAPGRIIVSDRTKLVQPLENSVVRRVLV 122

Query: 73  ENGSQILQGTPLLTFEDI----------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLN- 121
             G  +  G PLL  +            E     + + + ++ L+  +  E      L  
Sbjct: 123 REGDHVEAGQPLLELDPTAAHADRTSFGEAHRAAESESLRVRALQATLAGEAGPGTKLPR 182

Query: 122 -NKYDVLEKAFESRE--EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +  D+   A+ +RE  +     L ++    ++          R  + ++  +R++    
Sbjct: 183 WSPQDI-PAAWSARERTDAQAQLLAEWSDITARTARLDAERQRR--EAEIATVRAMVAK- 238

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             LE    ++R   +  Q   T+    F     +Q+ +  +ER+      E+  ++  Q+
Sbjct: 239 --LETTLPVVRQREADFQ---TLAAQGFMSGHATQDRM--RERV------EMERDLATQQ 285

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTF-------ADEMSKLTILEKTREQKT 291
             L+       EA     +YL E  R L + Q          A E+SK    E+     T
Sbjct: 286 ARLQEALATLAEARQARMSYLAETRRALSERQAQADLKREQNAQELSKA---ERRERLAT 342

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P++GT+    + +      ++Q LM IVP          +  K I  V+ G   T++
Sbjct: 343 LAAPVSGTVQQLAAHTEGGVVTEAQVLMVIVPDGAQVSAEVTLENKDIGFVEPGQDVTIK 402

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGF 409
              +   R   +  +  +++ +     N+ +    +  +L++    +A    +I L  G 
Sbjct: 403 LETFPFTR---YGTVPAQVETVTRDAVNDEKRGAIFPALLRLGTGHIAVDGKDIRLAPGM 459


>gi|167031204|ref|YP_001666435.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida GB-1]
 gi|166857692|gb|ABY96099.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida GB-1]
          Length = 458

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 98/443 (22%), Positives = 174/443 (39%), Gaps = 68/443 (15%)

Query: 19  RMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           R+  L+I G+I     LI W+ + PI+      G+ +    V +I++   GI+ +   + 
Sbjct: 42  RVVRLTIWGVILFFVFLIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGIVAEIFAKE 101

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV---LEKA- 130
           G  +  G PLL  +  ET    ++ +     L   +  E+ + +  ++   +   L KA 
Sbjct: 102 GEIVEVGQPLLRLD--ETRFASNVGETEADRLAMALRVERLSAEVQDSPLKIDEELRKAA 159

Query: 131 ----------FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                     ++SR +QL D +G       +               + +  R+ Y N L+
Sbjct: 160 PSQAASEESLYQSRRQQLQDEIGGLQQQLVQRQQE---------LREYSSKRAQYANSLE 210

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN---IHEQ 237
           L      LR       K++ M + L    A+SQ ++ +  R   ++  +L      I   
Sbjct: 211 L------LR-------KEIGMSEPLVATGAISQVEVLRLRRAEVENRGQLDSTALAIPRA 257

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQ--NQRTFADEMSKLTILEKTREQKT---- 291
           +  +R +    +E   +F       S  L Q    RT   E++K T   K  + +     
Sbjct: 258 EAAIREVQSKIEETRGKFR------SEALTQLNEART---ELNKATATSKALDDRVHRTM 308

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + SP+ G +      +     Q    +++IVP      I AK+ PK I  +  G  ATV+
Sbjct: 309 VTSPVRGIVKQLLVNTIGGVIQPGSDIIEIVPLDDTLVIEAKILPKDIAFLHPGQEATVK 368

Query: 352 FPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRN 407
           F  Y        KA +E+I    I+ +D       YY + L+ TD   L   +  + +  
Sbjct: 369 FTAYDYTIYGGLKAKLEQIGADTITDEDKKTT---YYLIKLR-TDRSHLGTDEKPLLIIP 424

Query: 408 GFPAEVLFTAKNTTLAQEIIHPI 430
           G  A V       T+   ++ PI
Sbjct: 425 GMVATVDIMTGKKTIMSYLLKPI 447


>gi|317492535|ref|ZP_07950963.1| HlyD family type I secretion membrane fusion protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919527|gb|EFV40858.1| HlyD family type I secretion membrane fusion protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 389

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 102/252 (40%), Gaps = 21/252 (8%)

Query: 189 RALLSSHQKDLT-MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           R L  S +++L   + NL E   +   +L   + +V K      E I  Q    R  +EL
Sbjct: 139 RQLYESRRRNLNETVANLQESYRLVVAELRMTQPLVAKGAASQVEVIRLQ----RQASEL 194

Query: 248 ---YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ---KTILSPIAGTIV 301
               D+A  ++A       R  E+  +  AD  ++L ++    +Q    T++SP+ G + 
Sbjct: 195 QGKIDDARNQYA------LRAREEQVKNNADLDAQLEVMAGKEDQLDRVTMISPVRGIVK 248

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             Q  +     Q    LM+IVP      I  ++ P+ I +++ G  ATV+   Y      
Sbjct: 249 DIQVMTVGGVLQPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKITAYDSSIYG 308

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD---NNIELRNGFPAEVLFTAK 418
                +E + P  + QD   + Q YY V ++      S+       +  G  A V     
Sbjct: 309 NLNGTVEIVSP-DTLQDEVRRDQYYYRVYVRTQSAELSNKAGRKFPILPGMVASVEIKTG 367

Query: 419 NTTLAQEIIHPI 430
             T+   +I P+
Sbjct: 368 QKTVLDYLIKPL 379


>gi|192289965|ref|YP_001990570.1| type I secretion membrane fusion protein, HlyD family
           [Rhodopseudomonas palustris TIE-1]
 gi|192283714|gb|ACF00095.1| type I secretion membrane fusion protein, HlyD family
           [Rhodopseudomonas palustris TIE-1]
          Length = 440

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 75/351 (21%), Positives = 141/351 (40%), Gaps = 27/351 (7%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A L   TL+ +    G+  W++  P+  +V +  +++ + NV  ++ P  G++ +  V +
Sbjct: 22  AGLGIATLVIVASTAGV--WAMTAPLASAVIAPAQVVVDSNVRRVQHPTGGVVAEIYVND 79

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAF 131
           G ++  G  L   ++      + L +  +  L   R  + +E++  D L    ++  +  
Sbjct: 80  GDEVRAGDMLARLDETMPRANLALIENQLNQLVVRRARLQSEQNGNDTLALPAEIAARRN 139

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +   +++D      +T        IS     L+    R   I      LE +    R  
Sbjct: 140 VAAIAEMIDG----ETTLFVRRRDAISGQQSQLR---ERKAQIADEIRGLEAQIVSKREQ 192

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   Q +L  ++ L+EKN V    L   ER   + T E  + I E       I E     
Sbjct: 193 IRWIQTELEGVRQLYEKNLVPYARLTALEREASRLTGEEGQLIAEIARARGRITE----T 248

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR-------EQKTILSPIAGTIVYNQ 304
            L+    +++  R++    R   D  +K+T L + R       E+  + +P  G +    
Sbjct: 249 ELQILQLVQDQRREVATELR---DVETKITDLGERRIAALDQLERVVLRAPQDGLVHQKS 305

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             +        + LM IVP   L  + AKV P+ I  +K G  A +RF  +
Sbjct: 306 VHTVGGVISAGEQLMLIVPKDSLV-VEAKVDPQMIDRLKVGQPAKLRFSAF 355


>gi|307947283|ref|ZP_07662617.1| putative toxin secretion transmembrane protein [Roseibium sp.
           TrichSKD4]
 gi|307769425|gb|EFO28652.1| putative toxin secretion transmembrane protein [Roseibium sp.
           TrichSKD4]
          Length = 441

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 73/369 (19%), Positives = 156/369 (42%), Gaps = 32/369 (8%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           + ++  + +  +E+     G+I+    V  ++  F G I +  V NGS++ +G  L+   
Sbjct: 27  MAIVVMACIFQVEVVARGQGKIVPVSRVQVVQPEFDGKITQIHVRNGSKVNKGDVLI--- 83

Query: 89  DIETTDL-IDLKKVSIKNLRCHIDTEK-----SALDFLNNKYDVLEKAFESREEQLLDFL 142
           +++TTD   DL  +S +  R  I+  +     S +D  N + +   KA  S   Q     
Sbjct: 84  ELDTTDAKADLNTISAEITRLQIERARIMALVSGIDVNNIQTETFSKAVLSSFSQNTKTD 143

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            +++    ++    + ++  ++     R+ S   + L  E     + A LS   + L M 
Sbjct: 144 DEFYKEQYRLLLAEVDNLQAAISQITARIISNNQSVLVTEANIERIEAALSIQSERLEMA 203

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE-QKNMLRHINELYDEANLEFANYLKE 261
           + L ++   S++             L+++E     +K    ++ EL ++ + E A   ++
Sbjct: 204 QGLLDRGTSSRSTF-----------LDVQEAFTAFEKEREVYLRELDEKRSQETAYQAEQ 252

Query: 262 ISRDLEQNQRTFADEM---SKLTILE---KTREQKTIL----SPIAGTIVYNQSFSSSNY 311
            S    Q  +     +   ++L  LE   +T +++ +     +P+ G +   + F+    
Sbjct: 253 RSLITTQRNKLLQRRLEIEARLATLEEQYRTADRRVVAAQLTAPMNGVVDQLEVFTIGAV 312

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           A+  + L+++VP  +   I A  T   I  V+ G  A + F  Y   R    K ++  + 
Sbjct: 313 AKGGEQLLRVVPEEQNVEIEAIFTNTDIGFVEIGQQANINFDAYPSARFGFVKGLVTDV- 371

Query: 372 PIISQQDNN 380
              S +DN+
Sbjct: 372 AADSTEDND 380


>gi|148975023|ref|ZP_01812003.1| hypothetical protein VSWAT3_25899 [Vibrionales bacterium SWAT-3]
 gi|145965532|gb|EDK30781.1| hypothetical protein VSWAT3_25899 [Vibrionales bacterium SWAT-3]
          Length = 457

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 81/373 (21%), Positives = 155/373 (41%), Gaps = 65/373 (17%)

Query: 13  HPAS-LKRMT-LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
            PAS L R + +L  + ++G + WSI+  + I  S++G+++       ++    G ++  
Sbjct: 36  RPASPLARTSAMLITVLLVGTLIWSIVGQLGIHASATGQVIVSGRSKFVQPVSQGEVRDI 95

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V++G  + +G  L           I L     K     + ++         +Y  L K 
Sbjct: 96  LVKDGQHVEKGEIL-----------IRLNPTGAKAELARVTSQYHYTQMELARYRALTK- 143

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVY-----RSLKMKLTRMRS--------IYLN 177
                       G+  S        GISSV       +L+  +  +R+        + +N
Sbjct: 144 ------------GQGVSMAQFAIPEGISSVLVEASKAALQSDVLEIRAQMESVDAELAVN 191

Query: 178 RLDLENKSSLLRAL---LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
           R + +   + +R+L   L +    L+  + L EK +++Q ++ + E+       EL +N 
Sbjct: 192 RANYKATKAEIRSLETLLKNVTTRLSARQKLAEKKSIAQMEVMELEK-------ELLDNQ 244

Query: 235 HEQKNMLRHIN-------ELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILE 284
             ++  L  +N       +L ++ +   A   KE      +LE  Q     E+ K++  E
Sbjct: 245 RSKQQQLSRLNVLNAEQDKLMEQKDTYLATKRKEFQSKLNELEGKQAELRQELVKVS--E 302

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
             R Q+ +++P++GTI   Q+ +     Q ++ LM IVP   L  I   +  K +  V  
Sbjct: 303 ANRLQQ-LIAPVSGTIQQLQANTQGGVVQAAEKLMVIVPDDALLDIEVMLLNKDVGFVVP 361

Query: 345 GYTATVR---FPH 354
           G  A V+   FP+
Sbjct: 362 GQIAEVKVDTFPY 374


>gi|291165613|gb|EFE27662.1| type I secretion membrane fusion protein, HlyD family [Filifactor
           alocis ATCC 35896]
          Length = 527

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 96/419 (22%), Positives = 167/419 (39%), Gaps = 95/419 (22%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS-GIIKKFQVENGSQILQGTPLL- 85
           +I ++ WSI+  ++    + G+I+  D  +++  P S G+I +  V+ G  + +G  L+ 
Sbjct: 62  LIFVLLWSIIGKVDEVAVARGKIVP-DGRIKVVQPMSDGVITEICVDEGEHVKKGQVLME 120

Query: 86  -----------------------------TFEDIETTDLIDLKKVS--IKNLRCHIDTEK 114
                                        T E  + TD +   ++S  +KN   H+ +E 
Sbjct: 121 MDTTLQEVDQDEIQKALNIAYIEKSLLQKTLEGQDVTDKLQEVQISEEVKNTLLHL-SES 179

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-RS 173
             LD+   K + L+   E  +E+LL    +Y     +V    I+ +      ++T + ++
Sbjct: 180 RELDY-KGKQEALQLQKEQAQERLLSAEAEYR---RQVRQKPINQIREKELKEVTEIPKT 235

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN---------------- 217
             L    LENK S+L       +K+ TM K L+E  A+++ D                  
Sbjct: 236 ETLELKKLENKISIL-------EKEETMQKQLYEAGAIAKQDWENAKNAVSIAKKEYATQ 288

Query: 218 ------QQERIVYK------STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
                 QQ   V +      STL L ++I  QK  ++        A  E A   KE+  +
Sbjct: 289 TAKAHMQQTNSVLEWQNAKSSTLNLEDSIELQKIKIQQ-------AEKEIALAEKEMD-N 340

Query: 266 LEQNQRT------------FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           L+QN RT              +  SKL    K    +T+ SP  G +    S +      
Sbjct: 341 LKQNYRTSLLNYIVEKDKEIQELTSKLEKANKILAFQTLESPTNGIVQGIASNTVGGVIT 400

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           ++Q +M IVP +    I A +  K I  V++G    V+   ++  +      II K+ P
Sbjct: 401 KAQTVMTIVPENTPLVIEAYLNNKDIGFVRQGQEVRVKLDAFSYQKYGTIDGIITKVSP 459


>gi|240947985|ref|ZP_04752406.1| type I secretion membrane fusion protein [Actinobacillus minor
           NM305]
 gi|240297700|gb|EER48169.1| type I secretion membrane fusion protein [Actinobacillus minor
           NM305]
          Length = 426

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 94/418 (22%), Positives = 163/418 (38%), Gaps = 80/418 (19%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            + W+   PI+      G I+       I+S   GI+K+  V+ G  + +G  LL  +D 
Sbjct: 63  FVIWAYNSPIDEVTRGQGSIIPNSREQVIQSLDPGILKEMLVKEGDTVEKGQVLLKLDDT 122

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            ++ ++   +  ++NL                      +A  +R       L        
Sbjct: 123 RSSAILRESQAKVENL----------------------EALSAR-------LQAEAYGTP 153

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            VF+  I +  +       R R IY  R     K+SL  +L S     L   KNL ++  
Sbjct: 154 LVFSEKIPASLQE------RERIIYEKR-----KTSLQESLAS-----LQNSKNLLDR-- 195

Query: 211 VSQNDLNQQERIVYK---STLEL----RENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
               ++   E IV K   S +EL    R++   Q  M+   N+   +A+ E      E+S
Sbjct: 196 ----EIRITEPIVAKGAVSAVELLRMKRQSTDLQLQMVERKNKYVTDASAELTKIEAELS 251

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIV 322
           +  E N    AD +          E+  I SP+ G IV N   ++        Q +M+IV
Sbjct: 252 QARE-NMAMRADPV----------ERSLIRSPLKG-IVKNIRINTIGGVISAGQDIMEIV 299

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII---SQQDN 379
           P      + A ++P  + +V+ G TA V+   Y        +  +  + P      ++ +
Sbjct: 300 PIEDTLLVEAYISPSDVAYVRPGMTALVKLTAYDYAIYGGLEGTVTLLSPDTLHDQKRPS 359

Query: 380 NLQ---TQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           +L+    + YY V++K      +D +   + +  G  A V       T+ Q +I PIT
Sbjct: 360 DLKLNPNEAYYRVLVKTEGSHLTDKDGKVMPIIPGMIASVDIKTGQKTVFQYLIKPIT 417


>gi|29345971|ref|NP_809474.1| hypothetical protein BT_0561 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29337865|gb|AAO75668.1| putative ABC transport system, lipoprotein [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 304

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 91/197 (46%), Gaps = 28/197 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R DL  + +  +  +++ Q++   ++NL    A +Q  L+  +  V   TL  
Sbjct: 84  MKSVESQRPDLAKQIAATKQQITTAQREKKRVENLLAAGAANQKQLDDWDAQV---TLLQ 140

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           ++ I ++ ++++  N L ++ N         +S  + Q      D+++K           
Sbjct: 141 QQLIAQESSLMKSTNSLTEQGN--------SVSIQVAQ----VEDQLNKC---------- 178

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I SPI GT++   +      A   +PL K+    ++ Y+RA VT +Q+  VK G   TV
Sbjct: 179 HIQSPIEGTVLAKYA-EGGELASVGKPLFKVGEVDRM-YLRAYVTSEQLSQVKLGDKVTV 236

Query: 351 RFPHYADIREKKFKAII 367
            +  Y +  +K +  ++
Sbjct: 237 -YSDYGNSEQKAYPGVV 252


>gi|150396106|ref|YP_001326573.1| HlyD family type I secretion membrane fusion protein [Sinorhizobium
           medicae WSM419]
 gi|150027621|gb|ABR59738.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium medicae WSM419]
          Length = 491

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/339 (20%), Positives = 130/339 (38%), Gaps = 30/339 (8%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WS +   +I  +S G+I     V  I+S  +   +   V NG ++  G  L+  +D E  
Sbjct: 57  WSWIGTFDIVATSQGKIQPLGRVKVIQSLETSKTRSVPVANGQEVKAGDLLVDLDDTELR 116

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              D+  + +  LR  I     AL  L ++  +  +A  SR+                VF
Sbjct: 117 ADADMLSIGLAALRADISRRDHAL-VLASELGIDAEATSSRK-----------PAAEIVF 164

Query: 154 NYGISSVYRS-----LKMKLTRMRSIYLNRLDLENK---------SSLL---RALLSSHQ 196
             GI    R      L+  ++ + S+ L+R+  + +         SS +   R L+++  
Sbjct: 165 PSGIPPQIRRREQAVLEADISELVSL-LDRIRAQKRQKEAEVARLSSTINAQRTLVATLG 223

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           + ++M  +LF   + S+ ++     I  ++  EL E + +       +  L  E      
Sbjct: 224 ERVSMRTSLFNSQSGSKAEVINAAEISQRAEAELAERVGQMAEAETGLQVLVAERTSAIR 283

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            ++ E +R      R   ++  +L  +        I SPI GT+      +         
Sbjct: 284 AFIAENARQRADVARRADEQEQQLRKITARLGSMKIHSPIDGTVQATAITTIGQIVSSGT 343

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            LM++VP      I A +  K I  V  G  A ++   +
Sbjct: 344 ELMRVVPLVGPIEIEAYLPNKDIGFVSAGMAAVIKIEAF 382


>gi|91223302|ref|ZP_01258568.1| putative protein secretion protein [Vibrio alginolyticus 12G01]
 gi|91192115|gb|EAS78378.1| putative protein secretion protein [Vibrio alginolyticus 12G01]
          Length = 446

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           TI +PI+G +V  Q F+        + L+++VP      + A+V P+ I  V  G  A V
Sbjct: 301 TINAPISGRVVNMQVFTEKGVIGSGETLLELVPQDDKLLVEARVNPQDIDLVNPGQQAHV 360

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRN 407
           R               +  I      Q+N    +++Y     +  +A S  ++    L +
Sbjct: 361 RLTALNARTLAPLDGTVLTISADKLSQENQ---EDFY-----LARIAISPEDVTKHRLTS 412

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G  AEVL  ++  T    +I PIT++  + F
Sbjct: 413 GMNAEVLILSEPRTPLSYLIKPITESMNRAF 443


>gi|269965323|ref|ZP_06179443.1| putative protein secretion protein [Vibrio alginolyticus 40B]
 gi|269829969|gb|EEZ84198.1| putative protein secretion protein [Vibrio alginolyticus 40B]
          Length = 446

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           TI +PI+G +V  Q F+        + L+++VP      + A+V P+ I  V  G  A V
Sbjct: 301 TINAPISGRVVNMQVFTEKGVIGSGETLLELVPQDDKLLVEARVNPQDIDLVNPGQQAHV 360

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRN 407
           R               +  I      Q+N    +++Y     +  +A S  ++    L +
Sbjct: 361 RLTALNARTLAPLDGTVLTISADKLSQENQ---EDFY-----LARIAISPEDVTKHRLTS 412

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G  AEVL  ++  T    +I PIT++  + F
Sbjct: 413 GMNAEVLILSEPRTPLSYLIKPITESMNRAF 443


>gi|172065352|ref|YP_001816064.1| HlyD family type I secretion membrane fusion protein [Burkholderia
           ambifaria MC40-6]
 gi|171997594|gb|ACB68511.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria MC40-6]
          Length = 474

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 148/379 (39%), Gaps = 38/379 (10%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +I L+ W+    ++      G+++    V  +++   GI+ +  V  G  + +G PL+  
Sbjct: 69  VIALL-WAAFAEVDEVTVGEGKVIPSSRVQVVQNLEGGIVSEIMVRVGQVVQKGQPLMRI 127

Query: 88  EDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +D   T        K  ++      +  E +   F      V+  A       LLD    
Sbjct: 128 DDTRFTSSYKEGQAKDAALLARIARLSAEANGAAF------VVPAALARANPGLLD---- 177

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQ---KDLT 200
                  +F     S  R L+  L  +R     +R +L  K S    L  S+    K+L 
Sbjct: 178 ---EERSLFE----SRQRELQANLDVLRQQAEQHRQELAEKRSREGQLQHSYALVAKELA 230

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEF-A 256
           +   L EK AVS  ++ + ER       +L   R  +   +   R   +  DE    F A
Sbjct: 231 LTSPLVEKGAVSDVEVLRLERQATDMKGDLDATRLAMPRLEAAYREARQKIDETTAHFRA 290

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVYNQSFSSSNYAQQS 315
           + +KE++       R     +S   +  + R  +T++ +P+ G I   +  +     Q  
Sbjct: 291 DAMKELNL-----ARADQSALSAANVALEDRVTRTLVRAPLKGMIKQIKINTVGGVIQPG 345

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPI 373
             L++IVP      I A+V P  I  +  G  ATV+   Y       F A++E I  D I
Sbjct: 346 MDLLEIVPLDDTLLIEARVRPADIAFLHPGQDATVKLSAYDFSIYGGFPAVVEDISADTI 405

Query: 374 ISQQDNNLQTQEYYEVILK 392
           +  +    +   YY V+++
Sbjct: 406 VPDRPGE-KPDSYYRVLVR 423


>gi|170701736|ref|ZP_02892673.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria IOP40-10]
 gi|170133347|gb|EDT01738.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria IOP40-10]
          Length = 474

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 83/379 (21%), Positives = 147/379 (38%), Gaps = 37/379 (9%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           I+  + W+    ++      G+++    V  +++   GI+ +  V  G  + +G PL+  
Sbjct: 68  IVVALLWAAFAEVDEVTVGEGKVIPSSRVQVVQNLEGGIVSEIMVRVGQVVQKGQPLMRI 127

Query: 88  EDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +D   T        K  ++      +  E +   F      V+  A       LLD    
Sbjct: 128 DDTRFTSSYKEGQAKDAALLARIARLSAEANGAAF------VVPAALARANPGLLD---- 177

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQ---KDLT 200
                  +F     S  R L+  L  +R     +R +L  K S    L  S+    K+L 
Sbjct: 178 ---EERSLFE----SRQRELQANLDVLRQQAEQHRQELAEKRSREGQLQHSYALVAKELA 230

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEF-A 256
           +   L EK AVS  ++ + ER       +L   R  +   +   R   +  DE    F A
Sbjct: 231 LTSPLVEKGAVSDVEVLRLERQATDMKGDLDATRLAMPRLEAAYREARQKIDETTAHFRA 290

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVYNQSFSSSNYAQQS 315
           + +KE++       R     +S   +  + R  +T++ +P+ G I   +  +     Q  
Sbjct: 291 DAMKELNL-----ARADQSALSAANVALEDRVTRTLVRAPLKGMIKQIKINTVGGVIQPG 345

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPI 373
             L++IVP      I A+V P  I  +  G  ATV+   Y       F A++E I  D I
Sbjct: 346 MDLLEIVPLDDTLLIEARVRPADIAFLHPGQDATVKLSAYDFSIYGGFPAVVEDISADTI 405

Query: 374 ISQQDNNLQTQEYYEVILK 392
           +  +    +   YY V+++
Sbjct: 406 VPDRPGE-KPDSYYRVLVR 423


>gi|254488405|ref|ZP_05101610.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. GAI101]
 gi|214045274|gb|EEB85912.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. GAI101]
          Length = 421

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 90/431 (20%), Positives = 180/431 (41%), Gaps = 56/431 (12%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI--- 90
           WS+   I  +V +SG I  E+N   ++ P  G++ +   ++G +I  G  ++  +D    
Sbjct: 20  WSVTARIAGAVIASGMIQVENNRQVVQHPEGGVVGEILAKDGDEIEAGDVVMRLDDALLQ 79

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE-EQLLDFLGKYHSTC 149
               ++  +   IK  +  +  E+  L+ +    +++E A  S E E ++D         
Sbjct: 80  SELAIVQGQLFEIKARQARLAAERDGLEDIVLPDELVEAAANSPEIESMID--------- 130

Query: 150 SKVFNYGISSVYRSLKMKLTR-----MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 G  S++ + K  L R        I      +E   + L A  +  Q+DL ++  
Sbjct: 131 ------GQRSLFLARKESLRREADQISEQIAQANNQIEGTEAQLAAFQT--QQDL-ILSE 181

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE--------ANLEFA 256
           L +  ++ +  L Q  ++   S+L+      EQ  +L  I  L           A+LE  
Sbjct: 182 LEDAESLLEKGLAQASKV---SSLQ-----REQARLLGEIGSLKATVAQLRGQIASLEI- 232

Query: 257 NYLKEISRDLEQNQRTFAD------EMSKLTI-LEKTREQKTILSPIAGTIVYNQSFSSS 309
             LK  +   E+   T +D      E+++  + L +T  +  I SP++G +  +Q F+  
Sbjct: 233 QVLKLTTTRREEANTTLSDLQYREIELAERRLSLRETLSRMEIRSPVSGVVYDSQIFALQ 292

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                + P+M ++P  +   + A++    I  V  G  A++RF  +      +    + +
Sbjct: 293 AVLSPAAPIMYVIPQDQPLVVSARIEAINIDQVHVGQEASLRFVAFEQRTTPEIFGQVSR 352

Query: 370 IDPIISQQDNNLQTQEYYEV-ILKITDLAFSDNNIELRNGFPAEVLF-TAKNTTLAQEII 427
           I   + +  + +  Q +Y   +L   +      + +L  G P E    TA+ + L+  + 
Sbjct: 353 ISADVFK--DEVTGQSFYRAELLPREEELEKLGDQKLVPGMPVEAFIRTAERSPLSY-LA 409

Query: 428 HPITDNWPKIF 438
            P+TD + K F
Sbjct: 410 KPLTDYFNKAF 420


>gi|193212502|ref|YP_001998455.1| secretion protein HlyD family protein [Chlorobaculum parvum NCIB
           8327]
 gi|193085979|gb|ACF11255.1| secretion protein HlyD family protein [Chlorobaculum parvum NCIB
           8327]
          Length = 392

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 42/200 (21%), Positives = 86/200 (43%), Gaps = 14/200 (7%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           + +Q+++   I +L  ++  E A    E+  D E++ +  A E++       TR    I 
Sbjct: 193 LSQQRDLEIRIAQLRADSQSELARVQNEVKADAEKS-KALAQELAD------TR----IT 241

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP  G +V  Q  +     Q  Q +M +VP  +   I AK+ P  I  V+ G T  + F 
Sbjct: 242 SPADGQVVGLQVQTVGAVIQPGQKVMDVVPLDEPLLIEAKIAPHLIDKVRTGLTVDLHFT 301

Query: 354 HYADIREKKFKAIIEKIDP-IISQQDNNLQTQ-EYYEVILKITDLAFSD-NNIELRNGFP 410
            ++   +      +E +   ++++  +  Q    YY   + +T     +  + +++ G P
Sbjct: 302 AFSHTPQMVVPGKVESVSSDLLTESPSGAQPAVSYYLARIAVTPEGMQELGDHKIQAGMP 361

Query: 411 AEVLFTAKNTTLAQEIIHPI 430
              +      ++   I+HP+
Sbjct: 362 VLAVIKTGERSMLTYILHPL 381


>gi|114706366|ref|ZP_01439268.1| putative transport protein [Fulvimarina pelagi HTCC2506]
 gi|114538227|gb|EAU41349.1| putative transport protein [Fulvimarina pelagi HTCC2506]
          Length = 451

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 87/448 (19%), Positives = 169/448 (37%), Gaps = 63/448 (14%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + LL+  G  G  TW+   P+  +V + G  +       ++    GII +  V  G Q+ 
Sbjct: 35  LLLLATFG--GFGTWAFSAPLAAAVLAPGSFVATGQNKIVQHLEGGIIDEILVSEGDQVY 92

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLR-----CHIDTEKSALDFLN-------NKYDV- 126
            G P++  +  ET      +++ +K+ R       +  E  A+D ++       N  DV 
Sbjct: 93  AGQPIVKLD--ETAAFAKDRQLWLKHARLEAINARLLAEYEAIDRISFPTILTANANDVE 150

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +     S+E   L+F G          +  I    R+ +    R       R  +E +  
Sbjct: 151 IADIMRSQE---LNFAG-----ARAKLDTEIDLFARNTEALNFRAEGYSRQRGSVERQLG 202

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LR       ++L+    L +K  +++  +N  +R            I E +  +  ++ 
Sbjct: 203 FLR-------EELSGKVALLKKGYINKTQVNALQRA-----------IAESEGQIGRLSS 244

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTREQK----------TILSP 295
             DE N + A Y +++ + +   ++   +E+  +   L+  RE++          TI +P
Sbjct: 245 EIDETNSQIAKYEQQVEQAIAAYRQAALEELQSIEAELDSVREERNNSSNILKRATIHAP 304

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + GTIV     +S    +  +P+ +I P +    I  ++    I  VK G  A VR    
Sbjct: 305 VDGTIVRLHYHTSGGVIESGKPIAEITPSNVPLIIEVQIPRTDIDSVKVGQEAMVRLSAL 364

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN-----GFP 410
                      +  +         N   QE Y   +K++    +D    +R      G P
Sbjct: 365 NQRTTPVLDGSVFYVSADALPDRMNGAAQEVYVARVKLS----ADELARVRGFAPTPGMP 420

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            +++      T    +  P+ D+  + F
Sbjct: 421 TDIMIKTAERTFFDYVSKPVVDSMSRAF 448


>gi|163732493|ref|ZP_02139938.1| putative HlyD family secretion protein [Roseobacter litoralis Och
           149]
 gi|161393853|gb|EDQ18177.1| putative HlyD family secretion protein [Roseobacter litoralis Och
           149]
          Length = 453

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 73/373 (19%), Positives = 153/373 (41%), Gaps = 31/373 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +L   H     +  + +I+  +G    WS + P+   V+  G I  E     I+    GI
Sbjct: 33  HLSETHDGGYAKSVIWTIVLAVGAFFYWSSVTPVYEVVTGEGTIKPEGLSTRIEHLEGGI 92

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V++G  +  G  +L  +    T +I  +   I  L   +    +  + ++    V
Sbjct: 93  VNEIAVQDGDIVQPGQLILQLD----TQIIQSELAQIDTLLTQVQESIARYETISAISFV 148

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                E R+   +  + + +   S+     I ++     +  T  ++I+ N   +E+   
Sbjct: 149 TLDDAELRQMTSISIISEVNYRLSQ-----IQTIRSQKSVASTEQQAIHAN---MES--- 197

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR---- 242
            LR  L+  Q      +      +VS   LN++E +  +  L L  +I +    +R    
Sbjct: 198 -LRQELAIQQAQFDRYQRAGFNGSVS---LNRREEL-QRENLRLESSIAQLSGEVRILDA 252

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I +L        A + ++ +  L++ +   A  +   T L    ++  I+SP++G +  
Sbjct: 253 RIEQLESSERELIAQFRRDAALQLDEKRTELAGLLETRTALNFQIQRSRIVSPVSGMV-- 310

Query: 303 NQSFSSSNYAQQSQP---LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
             + S  N  +  QP   +++I+P +  T+   ++   +I  V  G +A+V+   Y   R
Sbjct: 311 -NAISVQNLGEVVQPGEVIVEIIPSTGQTFAEIEIAADRIGGVTPGSSASVKVLTYDFTR 369

Query: 360 EKKFKAIIEKIDP 372
               +A++E I P
Sbjct: 370 YGSLEAVVEHISP 382


>gi|90406969|ref|ZP_01215160.1| HlyD family secretion protein [Psychromonas sp. CNPT3]
 gi|90312011|gb|EAS40105.1| HlyD family secretion protein [Psychromonas sp. CNPT3]
          Length = 457

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 87/392 (22%), Positives = 165/392 (42%), Gaps = 45/392 (11%)

Query: 16  SLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           S+ R T+ S+  + +    W+    ++      G+++   ++  I+S   GI+++  V+ 
Sbjct: 24  SVHRYTIWSLAALFVCFFIWAYFAKLDRITRGEGKVIPSSHIQVIQSLDGGILQELYVKE 83

Query: 75  GSQILQGTPLLTFEDIE-TTDL------IDLKKVSIKNLRCHI------DTEKSALDFLN 121
           G ++++G  L   +D    +DL      +D  + +I  LR  +      D +K  L    
Sbjct: 84  GMRVIKGQSLARIDDTRFRSDLAQQDREVDALRANIIRLRSELSSILVADVKKWQLQIKI 143

Query: 122 NK------YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           +K       D+ +K+    E Q  ++ G+ ++  +++         R  ++K        
Sbjct: 144 DKRILIFPVDLTKKSPTLIERQQQEYNGRINTLINQIAIQAQQIKQRGQEVK-------- 195

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-NI 234
               +L +K   L+  L    ++L + + L +KN V   +L + ER       ELR   I
Sbjct: 196 ----ELTSKIYTLQTSLKYANRELKLTRPLAKKNIVPLVELLKLERNANDIGGELRALRI 251

Query: 235 HEQKNMLRHINELYDEANL---EFA-NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            + K     +   ++EA L   E A  Y  E    L + Q  F+ ++++  I  K +  K
Sbjct: 252 SKPK-----LQAAFEEAILKRREAALKYRSEARAKLNELQSIFS-QITEAQIGVKDKVTK 305

Query: 291 TIL-SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            ++ SP+ GTI      +     +    L++IVP      I AK+ PK I  +  G  A 
Sbjct: 306 ALITSPVIGTIKTIHIRTLGGVVKPGDVLLEIVPTEDKLLIEAKILPKDIAFIHLGLRAR 365

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQ-QDNN 380
           V+   Y   R      ++E I    +Q +D N
Sbjct: 366 VKVTAYDFTRYGGLDGVVEHISADTTQDKDGN 397


>gi|117923861|ref|YP_864478.1| HlyD family type I secretion membrane fusion protein [Magnetococcus
           sp. MC-1]
 gi|117607617|gb|ABK43072.1| type I secretion membrane fusion protein, HlyD family
           [Magnetococcus sp. MC-1]
          Length = 439

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 14/167 (8%)

Query: 196 QKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEAN 252
           +K++ + + L EK  V +  L   Q+E    K  +  L+  I   ++ L       +EA 
Sbjct: 195 RKEIKLTQPLVEKGLVGEVTLLHAQREEANLKGEITSLQHAIPRARSALIESKSKLEEAT 254

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKL----TILEKTREQKTILSPIAGTIVYNQSFSS 308
           L F + ++E   DL     T + E++++    + LE    +  I SP+ GT++     + 
Sbjct: 255 LAFKSQVQE---DLN----TASSELTRIQQSSSALEDRVTRSAIRSPVNGTVIRVHVNTI 307

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
               Q    LM+I+P      + A++ PK I  +  G  ATV+F  Y
Sbjct: 308 GQVVQSGATLMEIMPTEDSLLVEARIDPKDIAFLHPGQPATVKFTAY 354


>gi|222147450|ref|YP_002548407.1| secretion protein HlyD family [Agrobacterium vitis S4]
 gi|221734440|gb|ACM35403.1| secretion protein HlyD family [Agrobacterium vitis S4]
          Length = 491

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 85/374 (22%), Positives = 162/374 (43%), Gaps = 61/374 (16%)

Query: 14  PASLKRMTLLSIIGII--GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           P S  RM L+ II  +    ITW+ +  I+I  ++ G+I     V  ++   +G +    
Sbjct: 39  PPSPVRMALVVIIAALFAVAITWAAVGKIDIVATAQGKIEPTLKVKIVQPLATGKVSDVL 98

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY------- 124
           V+NG  + +   L+  +D       D     +   R  +    +A++ ++++        
Sbjct: 99  VQNGDHVSKDQVLVRLDDSSAASQYDDLSEQLAASRAEVARRSAAIETVSSRNWPVGGAT 158

Query: 125 -------DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYL 176
                  + +  A + RE+ +LD                  S    L  +L+ + S I  
Sbjct: 159 QINVAWPEGISVALQRREQSVLD------------------SDVAQLSAQLSLIDSQIAQ 200

Query: 177 NRLDLENKSSLLRA---LLSSHQKDLTMMKNLFEKNAVSQND-LN--QQERIVYKSTLEL 230
             +D +   + + A   L+S+ +K   M + L + NA+S  D LN  Q+E    K  + L
Sbjct: 201 KTIDSDAFGATVSAQESLISTLKKLTFMRETLSQNNAMSTADWLNALQEEE---KEQVSL 257

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE-MSKLTILEKTREQ 289
           + +I+E+ +   +I  L  +A     +++ + ++ LE      ADE + +LT  ++ RE 
Sbjct: 258 QSDINEKLDADANIAVLKRQAVSTTQSFIADYAQKLEA-----ADEQVQELT--QQLREA 310

Query: 290 K------TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           K      T+ SP+ GTI  +   S          ++++VP      I+A +T  +I  V+
Sbjct: 311 KAQLDDMTLRSPVDGTIEASTLTSIGQVLTSGSEVLRVVPEGSHLDIQAYITNDEIGFVQ 370

Query: 344 KGYTATVR---FPH 354
            G  AT++   FP+
Sbjct: 371 VGQAATIKVTAFPY 384


>gi|256829661|ref|YP_003158389.1| HlyD family type I secretion membrane fusion protein
           [Desulfomicrobium baculatum DSM 4028]
 gi|256578837|gb|ACU89973.1| type I secretion membrane fusion protein, HlyD family
           [Desulfomicrobium baculatum DSM 4028]
          Length = 430

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 90/412 (21%), Positives = 171/412 (41%), Gaps = 48/412 (11%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT----- 93
           P++  V   G+I+    +  I++   GI+K+  V  G ++ +  PL+  +  + T     
Sbjct: 36  PLDEVVRGMGKIIPSTEIKRIQNFEGGIVKEILVREGEEVTKNQPLILLDQTQMTSRFRE 95

Query: 94  ---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
              + +D + ++I  L   +   K  + F     D      +++ E L        +  S
Sbjct: 96  QQSNYLD-QTLAIARLEAEL-AGKDTIVFPAEVQDQKPHLLKNQTELLRSRAANRQAALS 153

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            V  +      + LK              +L+++ S L++  +  +K++ M + +  K A
Sbjct: 154 -VLEFDRQQRLQELK--------------ELKSRLSYLQSNHALLKKEVDMTRAMVSKGA 198

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDL 266
            S+ DL + +R      +EL   I + +  +  +N   + A        +N+  EI ++L
Sbjct: 199 ASEMDLLRSQR----QLMELAGQIADARIAIPKVNATLEAAAHRIEEGESNHRTEILQEL 254

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP---LMKIVP 323
              +         L  LE    + T+ SP+ GT+   Q    +   +   P   +++IVP
Sbjct: 255 NTIRTEMEGRKETLPALEDQVNRTTVRSPVDGTV---QRVFVTTIGEAVAPGMEMLEIVP 311

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 + AKV P+ I  +  G  A V+   Y D     + ++  K++ I +    + Q 
Sbjct: 312 REDTLLVEAKVVPEDIAFLHPGQNADVKITAY-DF--SIYGSMTGKVEHISADAITDEQK 368

Query: 384 QEYYEVILKITDLA--FSDNNIELR--NGFPAEV-LFTAKNTTLAQEIIHPI 430
           +  Y +I   TD A   S N  EL    G  A+V + T K T L + I++PI
Sbjct: 369 KLSYYLIKVRTDSASLTSKNGKELPIIPGMVAQVDVLTGKKTVL-EYIVNPI 419


>gi|115361113|ref|YP_778250.1| HlyD family type I secretion membrane fusion protein [Burkholderia
           ambifaria AMMD]
 gi|115286441|gb|ABI91916.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria AMMD]
          Length = 474

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 148/379 (39%), Gaps = 38/379 (10%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +I L+ W+    ++      G+++    V  +++   GI+ +  V  G  + +G PL+  
Sbjct: 69  VIALL-WAAFAEVDEVTVGEGKVIPSSRVQVVQNLEGGIVSEIMVRVGQVVQKGQPLMRI 127

Query: 88  EDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +D   T        K  ++      +  E +   F      V+  A       LLD    
Sbjct: 128 DDTRFTSSYKEGQAKDAALLARIARLSAEANGAAF------VVPAALARANPGLLD---- 177

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQ---KDLT 200
                  +F     S  R L+  L  +R     +R +L  K S    L  S+    K+L 
Sbjct: 178 ---EERSLFE----SRQRELQANLDVLRQQAEQHRQELAEKRSREGQLQHSYALVAKELA 230

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEF-A 256
           +   L EK AVS  ++ + ER       +L   R  +   +   R   +  DE    F A
Sbjct: 231 LTSPLVEKGAVSDVEVLRLERQATDMKGDLDATRLAMPRLEAAYREARQKIDETTAHFRA 290

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVYNQSFSSSNYAQQS 315
           + +KE++       R     +S   +  + R  +T++ +P+ G I   +  +     Q  
Sbjct: 291 DAMKELNL-----ARADQSALSAANVALEDRVTRTLVRAPLKGMIKQIKINTVGGVIQPG 345

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPI 373
             L++IVP      I A+V P  I  +  G  ATV+   Y       F A++E I  D I
Sbjct: 346 MDLLEIVPLDDTLLIEARVRPADIAFLHPGQDATVKLSAYDFSIYGGFPAVVEDISADTI 405

Query: 374 ISQQDNNLQTQEYYEVILK 392
           +  +    +   YY V+++
Sbjct: 406 VPDRPGE-KPDSYYRVLVR 423


>gi|330830103|ref|YP_004393055.1| secretion protein, HlyD family [Aeromonas veronii B565]
 gi|328805239|gb|AEB50438.1| Secretion protein, HlyD family [Aeromonas veronii B565]
          Length = 472

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 73/346 (21%), Positives = 148/346 (42%), Gaps = 35/346 (10%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           I W+    ++      G+++    +  I++   GI+K+  V+ G  + +G PLL  +D  
Sbjct: 55  IVWAAWAELDEVTVGQGKVIPSRQLQVIQNLEGGIVKEIFVKEGDIVEKGQPLLRIDDTR 114

Query: 92  -TTDLIDLKK--VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE-----EQLLDFLG 143
             +D  + ++  V++K     +  E ++++  N+       A   RE     E  + F  
Sbjct: 115 FRSDFREREQEVVTLKGDVARLRAEMASVEVKNDP------ALGWREQVVVGEAPIQFPD 168

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRAL----------L 192
            Y +  ++ + +   SV R    +L  +++ +Y+    +E K   L  L          +
Sbjct: 169 GYETVFAE-YAHRERSVQRD---RLNNLKNQLYILGQQIEQKEQELIELNAKIRTVNRSV 224

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN---IHEQKNMLRHINELYD 249
              +++L + + L ++  V Q +L + ER V +   EL  N   I +  ++LR      +
Sbjct: 225 DLARQELNISRPLAKEGIVPQVELIKLERQVNEMQGELESNRLLIPKLNSVLRETISKRN 284

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +  L+F     +   +L + Q            L    ++ ++++P+ GTI   +  +  
Sbjct: 285 DIALKFR---ADSQTELNEKQGRLGQLSEGQVGLRDRVDRTSVIAPLKGTIKKLKINTLG 341

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
              Q    LM+IVP      + AKV+PK I  ++ G  A V+   Y
Sbjct: 342 GVVQPGMDLMEIVPLEDTLLVEAKVSPKDIAFLRPGLDAIVKITAY 387


>gi|156976384|ref|YP_001447290.1| hypothetical protein VIBHAR_05157 [Vibrio harveyi ATCC BAA-1116]
 gi|156527978|gb|ABU73063.1| hypothetical protein VIBHAR_05157 [Vibrio harveyi ATCC BAA-1116]
          Length = 446

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 98/454 (21%), Positives = 184/454 (40%), Gaps = 69/454 (15%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P  L  +TL   +G  GL  W+    +E +  + G++       EI+    GII+K  V+
Sbjct: 30  PILLGVLTLSLFLG--GLGYWAATAKLESAAIAYGDLSVLSKRQEIQHLEGGIIEKLYVQ 87

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-------IDTEKSALDFLNNKYD- 125
            G  + +G  LL     +    +D    S+     H       ++ E   L  +N  +D 
Sbjct: 88  EGDLVEKGQLLLRLSKRQANAKLD----SLGGQYIHTFVKENRLNAELDELPDINWAHDL 143

Query: 126 --------------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                         V  K FE+R+        ++  +   +    IS     L   L+  
Sbjct: 144 ETIQNGEIVAEAKLVQSKIFEARK--------RFFDSKLNIIAQSISGADLELD-NLSET 194

Query: 172 RSIYLNRLD-LENKSSLLRALLS---SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           + I   RL  +E + +  +AL+    S +  L  +K L  +   + + L++Q   V K  
Sbjct: 195 KVIERERLKFIEEEIASNQALVQKGFSGKSALLQLKRLAAEVRSTLSQLDRQSLTVSKRL 254

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            E +  I E K  L  +NE+ +E      N  KE+   + +  R+  D      I+ +T 
Sbjct: 255 DENQAKIEELK--LERLNEIVEE----LRNTKKELV-SIREEYRSAKD------IVART- 300

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               I++PI+G +V  Q F+        + L+++VP      + A+V+P+ I  +  G  
Sbjct: 301 ---DIVAPISGRVVNMQVFTEKGVIGSGETLLELVPQDDKLLVEARVSPQDIDLITPGQH 357

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI---E 404
           A VR      +  +    +   +  I + + +     ++Y     +  +A S  ++    
Sbjct: 358 AQVRLTA---LNARTLAPLDGTVLTISADKLSEQNQDDFY-----LARIALSQEDVAKHR 409

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           L +G  AEVL  ++  T    ++ P+T++  + F
Sbjct: 410 LTSGMNAEVLILSEPRTPLSYLVKPLTESMNRAF 443


>gi|260598999|ref|YP_003211570.1| hypothetical protein CTU_32070 [Cronobacter turicensis z3032]
 gi|260218176|emb|CBA33024.1| hypothetical protein CTU_32070 [Cronobacter turicensis z3032]
          Length = 389

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 15/189 (7%)

Query: 249 DEANLEFANYLKEI----SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           D+A  +FA   +E     + DL+   +  A +  +L       ++ T+ SP+ G +   Q
Sbjct: 199 DDARNQFAVRAREEQVKNNADLDAQLQAMAGKADQL-------DRATLFSPVRGVVKDIQ 251

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +     Q    LM+IVP      +  ++ P+ I +++ G  ATV+   Y        K
Sbjct: 252 VTTVGGVLQPGGKLMEIVPLEDQLLVETRINPRDIAYIRPGLPATVKITAYDSSIYGDLK 311

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTT 421
             +E + P  + QD   + Q YY V ++       + N     +  G  A V       T
Sbjct: 312 GEVEMVSP-DTLQDEVKRDQFYYRVYVRTQSAELKNRNGKRFPILPGMVANVEIKTGQKT 370

Query: 422 LAQEIIHPI 430
           +   +I P+
Sbjct: 371 VLDYLIKPL 379


>gi|330875819|gb|EGH09968.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 445

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 77/428 (17%), Positives = 157/428 (36%), Gaps = 35/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G      W+ L P++  ++  G ++       ++S   G++ K  V  G  + +G
Sbjct: 27  ILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQLVKEG 86

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLD 140
            PL   +  +        +  +++L        ++L    ++ D L++  F +  E +  
Sbjct: 87  EPLFRLDQTQV-------QADVQSLGAQYRMAWASLARWQSERDNLDEVRFPA--ELIAA 137

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALL 192
             G+       +   G   ++ S +  L R +S          L    +    S L A  
Sbjct: 138 GQGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQA 197

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S ++ L  ++ L +   +  N L + +R + +    L +N  E   + + I E      
Sbjct: 198 DSLRQQLRNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQGIVESRLRLQ 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQS 305
            +   Y KE+       +  +AD   K   LE+       + +   IL+P  G  V    
Sbjct: 258 QQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLQHSAILAPAGGIAVNMGV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + L++IVP      +  ++  + I  V       + F  +   R  +   
Sbjct: 311 HTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVAG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     Q  +    Q YY +   + D A    N + ++ G PAE+       +L  
Sbjct: 371 EVSLIS--ADQMQDEKTGQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTGERSLLN 428

Query: 425 EIIHPITD 432
            +  P+ D
Sbjct: 429 YLFKPLLD 436


>gi|218458944|ref|ZP_03499035.1| probable protein secretion protein, HlyD family [Rhizobium etli Kim
           5]
          Length = 365

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 70/373 (18%), Positives = 149/373 (39%), Gaps = 69/373 (18%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           G+ G   W++L P++ +  + G I    +   I+    GII      NG  +  G  L+ 
Sbjct: 16  GMAG--GWAMLAPLDSAAVAPGVIKVAGDRKLIQHLEGGIIADLNAANGDIVKAGKVLIQ 73

Query: 87  FEDIETTDLIDL-------KKVSIKNLRCHIDTE--------------KSALDFLNNKYD 125
            +  +    +DL       ++     LR   D +              KSA+D +  + D
Sbjct: 74  LDGTQARTKLDLLQNRIATREALAARLRAERDDKAEIEFDSALLANPTKSAMDAVAAQRD 133

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V              F  K+H+   +     +S   R  + ++T ++ + +     E++ 
Sbjct: 134 V--------------FAAKHHNLQDE--REILSQRRRQTQEEITGLQELIVT----EDRQ 173

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLR 242
                +     KDL   ++L ++  V++     L +Q+R V          I   ++ + 
Sbjct: 174 I---EVFEGETKDL---ESLLKRGLVTRERWLLLRRQQREVEGERATNVAAIARARSAMA 227

Query: 243 HIN-ELYDEANLEFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            I+ ++ + + L     ++E+S+      DL Q +R   D      +L +T     +++P
Sbjct: 228 EIDMQILNLSTLRLHEAVEELSKVEAELVDLRQEERAAKD------VLART----NVVAP 277

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G ++  +  ++    +  + LM +VP  +   + A V P+ ++ +  G  A V FP +
Sbjct: 278 VDGIVMDLKVHTTGGVVKPGETLMTVVPLGQQLVVEAMVRPEDVETIAPGQRARVSFPAF 337

Query: 356 ADIREKKFKAIIE 368
           A       + ++E
Sbjct: 338 ARYNLPPLEGVVE 350


>gi|153010757|ref|YP_001371971.1| HlyD family type I secretion membrane fusion protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151562645|gb|ABS16142.1| type I secretion membrane fusion protein, HlyD family [Ochrobactrum
           anthropi ATCC 49188]
          Length = 471

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 11/197 (5%)

Query: 250 EANLEFA------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +A  EFA      +   EI+ ++  +Q   +D   ++   +    +  + SP  G +   
Sbjct: 275 KAGAEFALTGIESDLQSEIAGEITSSQVELSDVQERIVAAKDVMRRVEVRSPQDGIVANI 334

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +        + +M IVP ++   +  K++P+ I  +  G  A +R   Y    ++  
Sbjct: 335 RLRTPGGVIAPGEAIMDIVPENEPLVVEMKISPRDIDSISVGAGAQIRLTAY---NQRSM 391

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVI-LKITDLAFSDN-NIELRNGFPAEVLFTAKNTT 421
             +  K+  I + Q  + +T   + V   +IT  + + N    L  G PAE++   K   
Sbjct: 392 APLDGKLTYIAADQSLDEKTDTAFFVARAEITPASLAANPTARLYPGMPAEIIIVHKERR 451

Query: 422 LAQEIIHPITDNWPKIF 438
               ++ PITD+  + F
Sbjct: 452 AIDYLVSPITDSLNRAF 468


>gi|254502278|ref|ZP_05114429.1| type I secretion membrane fusion protein, HlyD family [Labrenzia
           alexandrii DFL-11]
 gi|222438349|gb|EEE45028.1| type I secretion membrane fusion protein, HlyD family [Labrenzia
           alexandrii DFL-11]
          Length = 446

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 81/441 (18%), Positives = 172/441 (39%), Gaps = 43/441 (9%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           PA   R+ +   I  + L+ W+ +  I    ++ GEI     ++ ++    GI+ +  VE
Sbjct: 30  PAFYTRLLIGLTIATLALLVWAAIGQIREVANTIGEITPAGQILAVEHLEGGIVSEVLVE 89

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  ++ G P+   E  +TT   +L ++  +     ++ E+      N+   V       
Sbjct: 90  EGQLVMAGDPIARLEKEDTTS--ELGRIQSRLSYLELEEERLIAQEYNDPNTV-----GL 142

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R +  ++ L              ++    +   ++ + R+   +   LE +  L ++ + 
Sbjct: 143 RLDPTVNGLSAQQRAALTANRRAVADEQDAYTARVGQKRAEVAS---LEVQVELQKSQVE 199

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDE 250
             ++   + + L +    S+    + +    +S + L +   N+ + + ML       ++
Sbjct: 200 LEKEKFQIQETLLKDGYTSRRRYLESKGEYQRSQVTLEQLVGNLAQAREMLTEAQASLNQ 259

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSS 309
           A  E    + +    + Q +   A E+SKL    K R+ +  + +P+ G   Y ++   +
Sbjct: 260 AGAEVNRDVADERARIAQERAELAQEISKL----KDRQDRLFVRAPVNG---YIKTLGQT 312

Query: 310 NYAQQSQP---LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                  P   + +IVP S+      KV P+ I H+  G  A +    Y       +  I
Sbjct: 313 GRGAVVNPGDMIAEIVPQSESMVAEVKVNPRDIGHINVGDKAEITITSY---DPNIYGTI 369

Query: 367 IEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNI-------ELRNGFPAEVLFTA 417
           + +++ I +   QD      EY E   K  DL F  N I        +R G         
Sbjct: 370 VAEVETISASSFQD------EYGEYYFK-ADLGFPGNTIGTGNVTSPVRPGMQVNAQVVT 422

Query: 418 KNTTLAQEIIHPITDNWPKIF 438
            + ++   +++P+T     +F
Sbjct: 423 GSKSVLAYLLNPVTRAMRTVF 443


>gi|104779439|ref|YP_605937.1| type I toxin efflux membrane fusion protein [Pseudomonas
           entomophila L48]
 gi|95108426|emb|CAK13120.1| putative type I toxin efflux membrane fusion protein [Pseudomonas
           entomophila L48]
          Length = 458

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 95/447 (21%), Positives = 175/447 (39%), Gaps = 76/447 (17%)

Query: 19  RMTLLSIIGIIG----LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           R+  L+I G+I     +I W+ + PI+      G+ +    V +I++   GI+ +   + 
Sbjct: 42  RIVRLTIWGVIAFFLFMIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGIVAEIFAKE 101

Query: 75  GSQILQGTPLLTFED------IETTDLIDLK-KVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           G  +  G PLL  ++      ++ T+ + L   + ++ L   ++ +   +D    K    
Sbjct: 102 GEIVEVGQPLLRLDETRFASNVDETEALRLAMALRVQRLNAEVEDKTLQIDEELRKAAPS 161

Query: 128 EKA-----FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           + A     ++SR +QL D                ++ + + L  K   +R     R    
Sbjct: 162 QAANEQSLYQSRRQQLQD---------------EVAGLQQQLVQKQQELREFNSKRAQYA 206

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           N   LLR       +++ M + L  + A+SQ ++           L LR    E +  + 
Sbjct: 207 NSLQLLR-------QEIAMSEPLVAQGAISQVEV-----------LRLRRAEVENRGQMD 248

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADE-----------MSKLTILEKT---RE 288
             +     A       +KE+   +E+ +  F  E           ++K T   K    R 
Sbjct: 249 STSLAIPRAE----AAIKEVESKIEETRGKFRSEALTQLNEARTELNKATATSKALDDRV 304

Query: 289 QKTIL-SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +T++ SP+ G +      +     Q    +++IVP      I AK+ PK I  +  G  
Sbjct: 305 NRTVVTSPVRGIVKQLLVNTIGGVIQPGSDIIEIVPLDDTLVIEAKILPKDIAFLHPGQE 364

Query: 348 ATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITD---LAFSDNNI 403
           ATV+F  Y        KA +E+I    I+ +D       YY + L+ TD   L   +  +
Sbjct: 365 ATVKFSAYDYTIYGGMKAKLEQIGADTITDEDKKTT---YYLIKLR-TDKSHLGTDEKPL 420

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +  G  A V       T+   ++ PI
Sbjct: 421 LIIPGMVATVDIMTGKKTIMSYLLKPI 447


>gi|87119192|ref|ZP_01075090.1| type I secretion adaptor protein (HlyD family protein) [Marinomonas
           sp. MED121]
 gi|86165583|gb|EAQ66850.1| type I secretion adaptor protein (HlyD family protein) [Marinomonas
           sp. MED121]
          Length = 442

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 83/375 (22%), Positives = 155/375 (41%), Gaps = 44/375 (11%)

Query: 31  LITWSILLPI-------------EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +I WSIL+ +             E++V   G+++    V  +++   GI+K+  +E G  
Sbjct: 31  IILWSILVFVIFGGLWANYTKLDEVTVGE-GKVIPSSQVQIVQNLEGGILKEIHIETGDN 89

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF----ES 133
           + +   L+T E+      +  ++    NL       K+        +D   +A       
Sbjct: 90  VERDQLLMTIENTAAVSSLREQQAEGINLAVRAARLKAESGGDTPSFDADLRALYPEVVE 149

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           RE +L     +  ST   VF   ++   + +              ++L  K   LR    
Sbjct: 150 RELRLYQNRSESLSTNQFVFEQQVAQKQQEI--------------IELSAKLDNLRTSYE 195

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q++L++ +  FE+ AVS+ +L Q ER V +   +++ +   Q  + R  + L  EA  
Sbjct: 196 LAQEELSLTRPAFEQGAVSRVELLQLERQVNQMEGDMKAS---QLALPRAESSLV-EAKT 251

Query: 254 EF----ANYLKEISRDLEQNQRTFADEMSKLTI-LEKTREQKTILSPIAGTIVYNQSFSS 308
           +     A +  E   +L + Q T  D++ + ++ LE    +  + SP+ G +   Q  + 
Sbjct: 252 KLLESSAKFRAEAQEELTKVQTTL-DKIKEASVSLEDKVLRTQVRSPVKGIVKQLQINTV 310

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q  Q L++IVP      I AK+ P+ I  +K    A V+   Y         A ++
Sbjct: 311 GGVIQPGQSLVEIVPLEDSLLIEAKIRPEDIGFIKPELVAIVKLSAYDFAIYGGLNAQVD 370

Query: 369 KI--DPIISQQDNNL 381
            I  D II ++ N+ 
Sbjct: 371 NISADTIIDEEGNSF 385


>gi|242279547|ref|YP_002991676.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio salexigens DSM 2638]
 gi|242122441|gb|ACS80137.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio salexigens DSM 2638]
          Length = 445

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 70/369 (18%), Positives = 142/369 (38%), Gaps = 59/369 (15%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           I G + W  +  I+     SG+I+   ++  ++S   GI+    + +G  + +G  L+  
Sbjct: 44  IAGFVAWVSVTRIDEVAVCSGKIIPSGHIKRVQSEDGGIVSDILIRDGQAVKKGQDLIAM 103

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +            VS+ NL  H+               V E + + R+E+L   +     
Sbjct: 104 DPT----------VSVSNLDQHL---------------VREASLDLRKERLAALIDGRKP 138

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL---SSHQKDLTMMKN 204
             SKV         +  ++   ++ S+  +R  L N+     A L   S+ +++L     
Sbjct: 139 DYSKVDERYKELAAQQRRLHSQKIESMKASRAILNNQIKQYEAELKELSTREENLRQQYA 198

Query: 205 LFEKNAVSQNDLNQQERI-------VYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           L ++   S  DL +++ +       V +  L ++EN+H+       + E   E+      
Sbjct: 199 LLKEEYESYEDLFKKQLVGKSEYFSVKRQFLHVQENLHQIPVRRIQVGEKLTESK----- 253

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTRE--------------QKTILSPIAGTIVYN 303
                +R ++  +      MS+L I+E                  Q ++ +P  G +   
Sbjct: 254 -----NRLVKLKEEALESWMSELAIVEAEASEIHEIIKRFEMDVFQLSVKAPEDGVVHNL 308

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           Q  S     +  + ++++VP  K      +++ + + H+K G   TV+F  Y   R    
Sbjct: 309 QINSPGEVDKPGETVLELVPVGKELIAEVRISSRDVGHIKVGQAVTVKFTAYDFARYGGI 368

Query: 364 KAIIEKIDP 372
           K  +  I P
Sbjct: 369 KGKLTDISP 377


>gi|254437002|ref|ZP_05050496.1| auxiliary transport protein, MFP family, putative [Octadecabacter
           antarcticus 307]
 gi|198252448|gb|EDY76762.1| auxiliary transport protein, MFP family, putative [Octadecabacter
           antarcticus 307]
          Length = 430

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 58/147 (39%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P++G +   Q F S    Q +  L+ IVP  +   I A+V P  I  +  G    VR
Sbjct: 281 IRAPVSGIVYGLQIFGSGVVIQPADALLYIVPQDRPLVIAAQVAPTDIDVLTIGQEVAVR 340

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           F         +    +  +       + N  +    E+ L   ++    NN+ L  G P 
Sbjct: 341 FSALDQRTTPELYGTVALVSADAFTDNTNGVSYYRAEIALNEGEITRLPNNVTLIPGMPV 400

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIF 438
           E      + T    ++ P++D   ++F
Sbjct: 401 EAFIRTADRTPFNYLLRPLSDYIARMF 427


>gi|153831706|ref|ZP_01984373.1| membrane-fusion protein [Vibrio harveyi HY01]
 gi|148872216|gb|EDL71033.1| membrane-fusion protein [Vibrio harveyi HY01]
          Length = 446

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 103/451 (22%), Positives = 187/451 (41%), Gaps = 63/451 (13%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P  L  +TL   +G  GL  W+    +E +  + G++       EI+    GII+K  V+
Sbjct: 30  PILLGVLTLSLFLG--GLGYWAATAKLESAAIAYGDLSVLSKRQEIQHLEGGIIEKLYVQ 87

Query: 74  NGSQILQGTPLLTFEDIETTDLID------LKKVSIKN-LRCHID-----TEKSALDFLN 121
            G  + +G  LL     +    +D      +  ++ +N L   +D          L+ + 
Sbjct: 88  EGDLVEKGQVLLRLSKRQANAKLDSLGGQYIHTIAKENRLNAELDELPDINWARDLETIQ 147

Query: 122 NKYDVLE------KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           N   V E      K FE+R+        ++  +   +    IS     L   L+  + I 
Sbjct: 148 NGEIVAEAKLVQSKIFEARK--------RFFDSKLNIIAQSISGANLELD-NLSETKVIE 198

Query: 176 LNRLD-LENKSSLLRALLS---SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
             RL  +E + +  +AL+    S +  L  +K L  +   + + L++Q   V K   E +
Sbjct: 199 RERLKFIEEEIASNQALVQKGFSGKSALLQLKRLAAEVRSTLSQLDRQSLTVSKRLDENQ 258

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             I E K  L  +NE+ +E      N  KE+   + +  R+  D      I+ +T     
Sbjct: 259 AKIEELK--LERLNEIVEE----LRNTKKELV-SIREEYRSAKD------IVART----D 301

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I++PI+G +V  Q F+        + L+++VP      + A+V+P+ I  +  G  A VR
Sbjct: 302 IVAPISGRVVNMQVFTEKGVIGSGETLLELVPQDDKLLVEARVSPQDIDLITPGQHAQVR 361

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDNNI---ELRN 407
                     +  A ++     IS    + Q Q ++Y     +  +A S  +I    L +
Sbjct: 362 LTAL----NARTLAPLDGTVLTISADKLSEQNQDDFY-----LARIALSQEDIAKHRLTS 412

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G  AEVL  ++  T    ++ P+T++  + F
Sbjct: 413 GMNAEVLILSEPRTPLSYLVKPLTESMNRAF 443


>gi|255318172|ref|ZP_05359411.1| membrane spanning export protein [Acinetobacter radioresistens
           SK82]
 gi|262379618|ref|ZP_06072774.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter radioresistens SH164]
 gi|255304718|gb|EET83896.1| membrane spanning export protein [Acinetobacter radioresistens
           SK82]
 gi|262299075|gb|EEY86988.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter radioresistens SH164]
          Length = 396

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 24/219 (10%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
           Y  R +LE   S L+  L   +++L M + L  K A S+ ++           L L+   
Sbjct: 150 YSRRSNLEQSMSGLKQALELVRQELVMTEPLVAKGAASEVEV-----------LRLKREA 198

Query: 235 HEQKNMLRHI-NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           ++ +N +  + N+ Y +A  E A    + + D+E  Q+       K   L++T    T  
Sbjct: 199 NDLQNQMNDLQNQYYVKAREELA----KANTDIETQQQVVK---GKSDTLQRT----TFK 247

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P+ G +      +      Q+  LM IVP  +   I A+++P+ I  ++ G  A V+  
Sbjct: 248 APVRGIVKEIDVMTRGGVVPQNGKLMTIVPLDEQLLIEARISPRDIAFIRPGQDALVKIT 307

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            Y        K  +  I P  + +D   Q Q YY V ++
Sbjct: 308 AYDYSIYGGLKGKVTVISP-DTIRDEVKQDQFYYRVYIR 345


>gi|78033515|emb|CAJ30133.1| putative HlyD secretion protein [Magnetospirillum gryphiswaldense
           MSR-1]
 gi|144901176|emb|CAM78040.1| HlyD secretion protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 458

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 74/370 (20%), Positives = 144/370 (38%), Gaps = 41/370 (11%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           I W+ L  ++I  S++G+I+  + V  I+   + II+   V+ G ++  G  L+  E   
Sbjct: 91  IVWASLGELDIVASATGKIIPSERVKSIQPLETAIIRTIAVKEGQEVKAGDTLVVLEI-- 148

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           T    D+ ++S  N+    D  +            L    +    Q L          ++
Sbjct: 149 TGAGSDVSRLSADNVTARADVAR------------LSALLQPDPAQALRLPTDLSPELAE 196

Query: 152 VFNYGISSVYRSLKMKLT--------RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +    +S+     K KL         R   +  NR DL+  S++   +      + T  +
Sbjct: 197 MHRSLLSAALAEHKAKLAGLSAELAKRQAELTTNRTDLKRLSNVEGKIAD----ETTRRQ 252

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY-------DEANLEFA 256
            L  K   SQ D  + E+       EL EN  +Q+ +     E          + N    
Sbjct: 253 ELATKGYGSQIDRLKVEK-------ELAENQGQQQVLRARTAEAEAAILALQSQVNQARE 305

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            + K+++  L + +   A     L      ++ +T+ +P+ G +   +  +       +Q
Sbjct: 306 EFRKDVTTKLSEARSKAASTEQDLAKAADRQKVQTLTAPVDGVVQQIEVHTIGGVVTPAQ 365

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            LM +VP   +  + AK+  K I  V++G  A ++   +   R     A +E +  + + 
Sbjct: 366 KLMTLVPKGAVLEVEAKLPNKDIGFVEEGQEAEIKIDAFPFTRYGTLPARVENVS-LDAI 424

Query: 377 QDNNLQTQEY 386
           +D   Q +EY
Sbjct: 425 KDEKEQDKEY 434


>gi|118593549|ref|ZP_01550928.1| putative protein secretion protein, HlyD family membrane fusion
           protein, secretes ExpE1 [Stappia aggregata IAM 12614]
 gi|118433888|gb|EAV40547.1| putative protein secretion protein, HlyD family membrane fusion
           protein, secretes ExpE1 [Stappia aggregata IAM 12614]
          Length = 436

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 90/454 (19%), Positives = 181/454 (39%), Gaps = 56/454 (12%)

Query: 12  NHPASLKRMTLLSI----IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           + P SL++  + ++    IG  G + W     ++ +  ++G+++ +     I     GI+
Sbjct: 9   SRPPSLRKPLMAAVLTVSIGFGGFLLWGFTADLDSAAVATGKVIVDSKRKTISHLEGGIL 68

Query: 68  KKFQVENGSQILQGTPLLTFEDIET-TDLIDL--KKVSIKNLRCHIDTEKSALDFLNNKY 124
           ++  V+ G  +  G PL+  +D     +L  L  K+VS+      +  E+   + +    
Sbjct: 69  RRLLVQEGDFVDAGQPLVELDDTRARAELAQLNGKRVSLLARLARLRAERDLAEEI---- 124

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            V  +   S +E L                  I+ V  + K    + R +Y  ++ L+ K
Sbjct: 125 -VFPEEIRSSDEPL------------------IAEVVAAEKGVFEKRRQVYEGKIALQQK 165

Query: 185 S-SLLRALLSSHQKDLTMM---KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                 A + ++Q  +      + L E+   + + L   E+  + S   L E   E   M
Sbjct: 166 EIEQYVAQIEANQAQIEATGHRRQLLEERVSALSGL---EKKGFTSKAMLSEVQLELSEM 222

Query: 241 LRHINELYDE-ANLEFANYLKEIS--RDLEQNQRTFADEMSKLTI-LEKTREQ----KTI 292
           +    E   + A  E A    E++  +  ++ Q   A E+ +  + L  T EQ    K +
Sbjct: 223 IGDGGEFAAQKARAEKARQGAEVALLQAEQEWQSDIAGEILEAQLELNVTNEQIISSKDV 282

Query: 293 L------SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           L      SP AGT+   +  +     +  + +M IVP  +   +  ++    I  V+ G 
Sbjct: 283 LDRLVVHSPQAGTVSNIEMRTPGGVVEPGKAIMDIVPRDEKMLVEVRMNLNDIDSVRVGS 342

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK--ITDLAFSDNNIE 404
            A +R   Y     +    +  ++  + + Q  + QTQ  Y ++    ++        + 
Sbjct: 343 EARIRLTAY---DRQTTSPLGGEVTYVAADQTVDPQTQAAYYIVRAQVLSGELEGKPALS 399

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           L  G PAEVL   +     + ++ PIT++  + F
Sbjct: 400 LYPGMPAEVLIVRRARKAMEYLLEPITESLDRAF 433


>gi|110677972|ref|YP_680979.1| HlyD family secretion protein [Roseobacter denitrificans OCh 114]
 gi|109454088|gb|ABG30293.1| putative HlyD family secretion protein [Roseobacter denitrificans
           OCh 114]
          Length = 453

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 77/379 (20%), Positives = 159/379 (41%), Gaps = 43/379 (11%)

Query: 8   NLKRNHPASLKRMTLLSII-GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +L   H     R  + +++  +     WS + P+   V+  G I  E     I+    GI
Sbjct: 33  HLSEVHDGGYARSVIWTVVLALAAFFYWSSVTPVYEVVTGEGTIKPEGLSTRIEHLEGGI 92

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V++G  +  G  +L  +    T ++  +   I+ L   +            +Y+ 
Sbjct: 93  VNEIAVQDGDIVQPGQLILQLD----TQIVQSELAKIETLLTQVQESI-------ERYET 141

Query: 127 LEK-AFESREEQLLDFLGKYHSTCSKV--FNYGISSV--YRSLK-MKLTRMRSIYLNRLD 180
           +   +F + ++  L    +  ++ S +   NY ++ +   RS K +  T  ++I+ N   
Sbjct: 142 ISAISFGTLDDTEL----RQMTSVSIISDINYRLAQIQTIRSQKSVASTEQQAIHAN--- 194

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +E+    LR  L+  Q  L   +      +VS   LN++E +  +  L L  +I +    
Sbjct: 195 IES----LRQELAIQQAQLDRYQRAGFNGSVS---LNRREEL-QRENLRLESSIAQLSGE 246

Query: 241 LR----HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +R     I +L        A + ++ +  L++ +   A  +     L+   ++  I+SP+
Sbjct: 247 VRILDARIEQLGSSEREMIAQFRRDAALQLDEKRTELAGLLETRAALDFQIQRSRIVSPV 306

Query: 297 AGTIVYNQSFSSSNYAQQSQP---LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           AG +    + S  N  +  QP   +++I+P +  T+   ++   +I  V  G TA+V+  
Sbjct: 307 AGMV---NAISVQNLGEVVQPGEVIVEIIPSTGETFAEIEIAADRIGGVTTGSTASVKVL 363

Query: 354 HYADIREKKFKAIIEKIDP 372
            Y   R     A++E I P
Sbjct: 364 TYDFTRYGSLDAVVEHISP 382


>gi|91776574|ref|YP_546330.1| secretion protein HlyD [Methylobacillus flagellatus KT]
 gi|91710561|gb|ABE50489.1| secretion protein HlyD [Methylobacillus flagellatus KT]
          Length = 433

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 68/327 (20%), Positives = 133/327 (40%), Gaps = 49/327 (14%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILN---EDNVVEIKSPFSGIIKKF 70
           P  +KR+ L  ++    + T  + LP + +V + G +      +    + +P  G+I+++
Sbjct: 18  PRLVKRILLWVVVSCFIVPTLILFLPWQQNVQAMGAVTAFAPLERRQSVDAPVGGVIRQW 77

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF-LNNKYDVLEK 129
            V  GS++  G PLL   D++               +  +  ++  +   L  K D L  
Sbjct: 78  FVREGSRVNAGDPLLEISDVD------------PRFKERLAAQRQTVAAKLKAKQDEL-- 123

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             ++ E QL + L    +  + V +YG++   + +      + S               +
Sbjct: 124 --QAYEVQLQNLLAVRQARIAAV-DYGLNVAQQKVVAAGESVASA--------------Q 166

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L +    ++ M+ L ++  VS+ D+   ER      + LR N++  K  L        
Sbjct: 167 ATLDAADFQVSRMQRLVQEGLVSRRDVELAER---DRAVALR-NVNSAKAALDSARAEEK 222

Query: 250 EANLEFANYLKEISRDLEQNQRTF-------ADEMSKLTILE---KTREQKTILSPIAGT 299
            A    A    E   +++ ++          AD  ++LT LE     +E + + +P AGT
Sbjct: 223 AATASQAQVRAETQANIDASRALISKISSEVADTQNELTSLEISLARQESQLVRAPRAGT 282

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           +      S S    Q QPL+ I+P ++
Sbjct: 283 VFRLPVNSQSQVISQGQPLLVIIPDTE 309


>gi|319795790|ref|YP_004157430.1| type I secretion membrane fusion protein, hlyd family [Variovorax
           paradoxus EPS]
 gi|315598253|gb|ADU39319.1| type I secretion membrane fusion protein, HlyD family [Variovorax
           paradoxus EPS]
          Length = 438

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 78/438 (17%), Positives = 161/438 (36%), Gaps = 39/438 (8%)

Query: 7   KNLKRNHPASLKRMTLLS-IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           K   +  P   +R  ++   + ++ L+   +  P+E  V + G ++  D V  I+    G
Sbjct: 15  KRAAQTSPKGRRRQWIIGGAVAVLALV--GLGFPMETVVVAPGRVIPSDRVKSIQHLEGG 72

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDL----IDLKKVSIKNLRCHIDTEKSALDFLN 121
           I+    V+ G  + QG  L+   D+  + L    +  +  + +  R  +  E        
Sbjct: 73  IVSAVLVKEGESVKQGQSLVEI-DLGGSGLNFEELTARYAATQATRVRLMAESRGQPLSR 131

Query: 122 NKY--DVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRSLKMKLTRMRSIYL 176
             +  D+ E  FE         LG Y +       V    +S         L + RS   
Sbjct: 132 QSFATDIDESVFEGE-------LGAYQARSLEQRGVMAGAVSG--------LEQARS--- 173

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            +L+ + K   L   L   QK+L + + LF +  V Q ++ ++ R        +R  +  
Sbjct: 174 KQLEQQAKVKGLSDRLELMQKELEISEQLFSEKLVGQVEVLEKRR----QAEGVRSELAV 229

Query: 237 QKNMLRHINELYDEANLEFA----NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            +  +   N    E+  + A     + +  S +L   +R FA     L      R +  +
Sbjct: 230 ARQGVISANAAITESQAKMAEAEGRFRRRASDELATVERQFASLSEDLARARTQRSRTVV 289

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +   ++ S     +  + ++++VP      + A++ P     V+ G +A V+ 
Sbjct: 290 KAPSDGIVKGLRNSSPGWVVKPGESILEVVPDKDEIMVEARLNPNDRGFVEIGQSARVKI 349

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             Y  +R    +  +  +     +     Q   YY +++ ++          +  G  +E
Sbjct: 350 TAYDYLRYGAVEGKVMLVAADADRDAAIAQGAPYYRLLISMSQSHVGRVENRITAGMESE 409

Query: 413 VLFTAKNTTLAQEIIHPI 430
           V            I+ P+
Sbjct: 410 VDLRVGTDPFIWYILRPV 427


>gi|239833736|ref|ZP_04682064.1| type I secretion membrane fusion protein, HlyD family [Ochrobactrum
           intermedium LMG 3301]
 gi|239821799|gb|EEQ93368.1| type I secretion membrane fusion protein, HlyD family [Ochrobactrum
           intermedium LMG 3301]
          Length = 471

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 83/197 (42%), Gaps = 11/197 (5%)

Query: 250 EANLEFA------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +A  EFA      +   EI+ ++  +Q   +D   ++   +    +  + SP  G +   
Sbjct: 275 KAGAEFALTGIESDLQSEIAGEITSSQVELSDVQERIVAAKDVMRRVEVRSPQDGIVANI 334

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +        + +M IVP ++   +  K++P+ I  +  G  A +R   Y    ++  
Sbjct: 335 RLRTPGGVIAPGEAIMDIVPENEPLVVEMKISPRDIDSISVGAGAQIRLTAY---NQRSM 391

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVI-LKITDLAFSDN-NIELRNGFPAEVLFTAKNTT 421
             +  K+  I + Q  + +T   + V   +IT  + + N    L  G PAE++   K   
Sbjct: 392 APLDGKLTYIAADQSLDEKTDTAFFVARAEITPASLAANPTARLYPGMPAEIIIVHKERR 451

Query: 422 LAQEIIHPITDNWPKIF 438
               ++ PITD+  + F
Sbjct: 452 AIDYLVSPITDSLNRAF 468


>gi|329903522|ref|ZP_08273535.1| Type I secretion membrane fusion protein, HlyD [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548305|gb|EGF32996.1| Type I secretion membrane fusion protein, HlyD [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 437

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 71/338 (21%), Positives = 129/338 (38%), Gaps = 36/338 (10%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           LI W+ L P++  V + G I+       ++    GI+    V  G  + +G  L+   D+
Sbjct: 39  LIVWATLAPVDKVVRTQGRIVPSVKPQLVQHLEGGIVSTVFVREGDVVAKGDSLVAVSDL 98

Query: 91  ETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFE--SREEQLLDFLGKY 145
                   K+  +  L+  I     E      +     +   A E  S  E  +   G+ 
Sbjct: 99  MANSSRGEKRARLNGLKARIARLSAEADGQSQVGVTAGLSPAAAEVLSENETFVARQGRL 158

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             T             R L+ +LT+ R      LD   K     A ++  Q  L ++  +
Sbjct: 159 RQT------------RRILEEQLTQKRQ-EAAELDARRKGLAAEAGVARQQ--LALVGTM 203

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +NA SQ +L + +  V +    L   I E +  L  +      A LE    L E    
Sbjct: 204 MARNAASQFELLEAQARVER----LATQIREAETALPRLAS----AALELQARLAETGAQ 255

Query: 266 LE-QNQRTFADEMSKLTILEKT------REQKTIL-SPIAGTIVYNQSFSSSNYAQQSQP 317
              ++Q +  +   +L  LE+       R  +T++ +P+AGT+    + +     +  + 
Sbjct: 256 FRSESQSSLTETKVELQRLEQDMKAEDDRVNRTVVTAPVAGTVNKLLANTVGGVIRPGET 315

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           L+++ P      I A+ TP +   ++ G  A VR   +
Sbjct: 316 LLELTPADGAVVIEARATPAERGPLQVGQRAVVRVAAF 353


>gi|15966700|ref|NP_387053.1| putative transport protein [Sinorhizobium meliloti 1021]
 gi|307300264|ref|ZP_07580044.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
 gi|307321141|ref|ZP_07600545.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|15075972|emb|CAC47526.1| Secretion protein [Sinorhizobium meliloti 1021]
 gi|306893216|gb|EFN23998.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|306904430|gb|EFN35014.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
          Length = 450

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 10/156 (6%)

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + TI SP+ GT+V +   ++       +P+M+I+P +    I A++    I  +K G  A
Sbjct: 296 RATIRSPVDGTVVRSYFHTAGGVIASGKPIMEILPANVPLIIEAQLLRTAIDQLKVGEDA 355

Query: 349 TVRFPHY-----ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NN 402
           T+R           ++ K F    + I+  ++      Q ++ Y V +++        + 
Sbjct: 356 TIRLSALNRRTTPVLKGKVFYVSADSIEEEVA----GGQQRDVYIVRVEVPASEIGRIHG 411

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                G PAEVL T    T  + +  PITD+  + F
Sbjct: 412 FHPVPGMPAEVLITTSERTFFEYLTKPITDSMSRAF 447


>gi|322418603|ref|YP_004197826.1| type I secretion membrane fusion protein, HlyD family [Geobacter
           sp. M18]
 gi|320124990|gb|ADW12550.1| type I secretion membrane fusion protein, HlyD family [Geobacter
           sp. M18]
          Length = 453

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 90/422 (21%), Positives = 158/422 (37%), Gaps = 55/422 (13%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            + W+ +  +E S    G+++    +  I++   GI+ +  V+ G  + +G  LL  ++ 
Sbjct: 54  FVGWAAVSEVEQSTRGEGKVIPASQIQVIQNLEGGILSELHVKVGDTVKKGQLLLKIDET 113

Query: 91  ETTDLID-------LKKVSIKNLRCHIDTEKSALDFLNNKYDVL--EKA-FESREEQLLD 140
                ++        +K     LR       S +   +    +   E+A FESR  +L  
Sbjct: 114 RFVSSLEQSQAKSGAEKAKAARLRAEASGSSSFIPPSDAPAGIAASERALFESRRTELKH 173

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            L    S   +          R L  +L  +   Y                 S + K++ 
Sbjct: 174 SLEVKQSQVEQR-----QGELRELNTRLRELNQTY-----------------SLYLKEIG 211

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA-------NL 253
           + + L  K AVS  +L Q ER       E++  I   K  +  I    DE+        L
Sbjct: 212 ITRPLVAKGAVSDMELLQLER----KASEMKGEIETIKQSIPRIQSKIDESYSAMKELRL 267

Query: 254 EFANYLKEISRDLEQNQRT--FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            F+N  K     +E N+      +E +    L+   ++  + SP+ GT+      +    
Sbjct: 268 NFSNKAK-----VEYNEVAAQLGEEAASSMALKDRLDRTLVRSPVNGTVNRILVNTIGGV 322

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q    +++IVP      I  K+ P  I  +K    A V+F  Y        +A +E+I 
Sbjct: 323 IQPGMNIVEIVPTEGTLLIETKIKPADIGFLKPSQKAMVKFSAYDYTIYGGLEARLEQIG 382

Query: 372 PIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
              S  D   + + YY V L+ TD   L   +  + +  G  A V   A   T+   ++ 
Sbjct: 383 A-DSITDEKKERESYYLVTLR-TDRSYLGTKEKPLPIIPGMVASVDILAGKRTILSYLLK 440

Query: 429 PI 430
           PI
Sbjct: 441 PI 442


>gi|17233314|ref|NP_490404.1| hypothetical protein alr7298 [Nostoc sp. PCC 7120]
 gi|17135836|dbj|BAB78382.1| alr7298 [Nostoc sp. PCC 7120]
          Length = 482

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 115/249 (46%), Gaps = 27/249 (10%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L+I G++G++ WS+   I I+V+  G ++N   VV+ +SP SG ++   V++G  + +  
Sbjct: 41  LAIFGVLGVL-WSVFGNIPITVTGKGVLINPRRVVQFQSPISGQVRSLNVKDGQCVAKDD 99

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE-KAFESREEQLLDF 141
            L T +  +    +  ++  +  L+  +  +K+ L  L  +   LE +A  +    L   
Sbjct: 100 ILATIDPSQQKQQLQQQRDKLAQLQRQV--QKTTL--LRQQQTQLETEAIAAERTSLKQR 155

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           L        ++ + G++S+ +               RL L+ +   +  L    QK +  
Sbjct: 156 LQNTQKLAPRLQDEGLNSIDQ--------------QRLSLQERLKDVEELTPVLQKRVEK 201

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANY 258
            + L ++ A+S+  + Q E+  Y+ T   R+NI + K  L+ +     E     LE  N 
Sbjct: 202 QRELQKQGAISEEQVLQAEQ-EYRQT---RQNISKIKAQLQQLRVQETEQQQKYLENKNN 257

Query: 259 LKEISRDLE 267
           + +I+ +LE
Sbjct: 258 ITQINAELE 266


>gi|148284165|ref|YP_001248255.1| alkaline protease secretion protein [Orientia tsutsugamushi str.
           Boryong]
 gi|146739604|emb|CAM79372.1| alkaline protease secretion protein [Orientia tsutsugamushi str.
           Boryong]
          Length = 518

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 103/447 (23%), Positives = 184/447 (41%), Gaps = 67/447 (14%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M +  ++G  GL  WS L P++ +  + G +++      I+    GI+K+  V+ G  + 
Sbjct: 108 MIIFIVVG--GL--WSALAPLDSAAVAVGTVISSTENKIIQHQEGGIVKEIFVKQGDYVK 163

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P++  +D +    +++K    + L             L N+   L    E +EE + 
Sbjct: 164 TGNPIIALDDTKIRASVEIKLGQYRTL-------------LANQAR-LTAELEQQEEIIF 209

Query: 140 DFLGKYHSTCSKVFNYGISSVYR--SLKMKLTRMRSIYLNR--LDLENKSSLLRALLSSH 195
             +         V N  I  V +  S++  L + R   LN   +  E +   L A + + 
Sbjct: 210 SEI--------LVNNNHIPEVAKIMSIQQHLFQARKKGLNARIMQFEKRIDSLEAKVVAS 261

Query: 196 QKDLTMMKNLFEKNA---VSQNDLNQQER---IVYKSTL-------ELRENIHEQKNMLR 242
           +K L  ++ L  KNA   ++Q    + E    +V +S+L       EL  N   Q+++ R
Sbjct: 262 KKQLEYVRKLI-KNAESLIAQGFGQKTELDKLLVEESSLVGNIIITELEIN-STQQDIER 319

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
             +E  D    E    LKE+   + + Q ++    S + IL +T     + SP+ G I  
Sbjct: 320 TKSEAIDRTLSE----LKEVEHAVIEAQESYN---SLIDILSRT----LVKSPVDGIIKV 368

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +        Q + +I P +    I+AK+  K I  VK G  A +RF  +       
Sbjct: 369 LDVNTKGGVIGSGQRIAEITPSNDSLIIKAKIPQKNIDSVKVGLKAKIRFGAFKYRTTPV 428

Query: 363 FKAIIEKIDP--IISQQ-----DNNLQTQEYYEVILKITDLAFSD----NNIELRNGFPA 411
           F   I  + P  +  QQ     +N +    +Y   ++I    F+       ++L  G  A
Sbjct: 429 FTGRIVLVSPDTVQDQQSAMQFNNAMIGDTFYIAKIEIDMDEFNKVAKVQKLKLFPGMQA 488

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIF 438
           ++       TL + ++ PITDN  + F
Sbjct: 489 DIQIITGTRTLLRYLLDPITDNMFRAF 515


>gi|159185718|ref|NP_357223.2| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
 gi|159140852|gb|AAK90008.2| secretion protein, HlyD family [Agrobacterium tumefaciens str. C58]
          Length = 437

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 85/427 (19%), Positives = 161/427 (37%), Gaps = 49/427 (11%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    +  +V +SG ++ +    +++ P  G++ +  V  G ++  G  ++  +  +T 
Sbjct: 35  WAATTNLAGAVVASGHLVVDSYTKKVQHPKGGVVGEILVNEGERVKAGDVVMRLDATQT- 93

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                        R ++      LD L  +   LE   +   E +        +  ++  
Sbjct: 94  -------------RANLAIVTKRLDELGARMARLEAERDDLAELIFP-----QALIARRD 135

Query: 154 NYGISSVYRSLKMKLTRMRSIY--------LNRL-DLENKSSLLRAL-------LSSHQK 197
           +  ++S  RS + KL   R  Y          R+   E++   L+A        L+  + 
Sbjct: 136 DPDVASAMRS-ETKLFEFRKSYREGRKAQLAERITQFEHEIEGLKAQEVAYDNGLAVLEA 194

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++T  K+L E+  VS   LN  +        E  E I  Q      I E   +  L+   
Sbjct: 195 EITSQKSLREQGVVSVQRLNSLQTQAATFGGERGEKIAYQAQTAGRITETKLQI-LQIDQ 253

Query: 258 YLK-EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            L+ E+ R+L + Q    + + +    E   ++  I++P +G +      +       + 
Sbjct: 254 ELRTEVGRELREIQAQMGEFVERKVAAEDELKRIDIVAPQSGMVHEMAVHTVGGVVTPAD 313

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-IIS 375
           P+M IVP      +  ++ PK I  ++ G  A +R   +      + +  + +I   I +
Sbjct: 314 PIMLIVPDGDELALEVQIVPKDIDQLQVGQKAMLRMTAFNQRVTPELEGHVSRIAADITT 373

Query: 376 QQDNNLQTQEYYEVILKITDLAFSD----NNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            Q   L    YY   L    +  S+    NN  L  G PAE        T    I  P+T
Sbjct: 374 DQRTGLS---YY---LARISVPVSEREKLNNAPLVPGMPAEAFIQTSERTALSYIAKPLT 427

Query: 432 DNWPKIF 438
           D   + F
Sbjct: 428 DQISRAF 434


>gi|322515049|ref|ZP_08068057.1| type I secretion membrane fusion protein [Actinobacillus ureae ATCC
           25976]
 gi|322118929|gb|EFX91106.1| type I secretion membrane fusion protein [Actinobacillus ureae ATCC
           25976]
          Length = 406

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 53/253 (20%), Positives = 103/253 (40%), Gaps = 20/253 (7%)

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           LRA+ S   K LT  K L ++     + + ++  +   S +EL    H+  ++ + I E 
Sbjct: 156 LRAM-SDAVKGLTHSKALLDREIALTSPMVKRGVM---SEVELLRTKHQSADLAQQIAER 211

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            +        Y  E + +L + +   A     L +     E+  I +P+ G +   +  +
Sbjct: 212 KN-------RYAAEANEELVRTESELAQAKETLAMYADPVERSQIKAPLRGIVKNIKINT 264

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  Q +++I+P  +   ++A ++PK +  ++ G  A V+   Y        +  +
Sbjct: 265 VGGVVQAGQDILEIIPLDEKLLVQAYISPKDVAFIRSGQLALVKISAYDYASYGGLEGKV 324

Query: 368 EKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAK 418
             I P   Q D    T      + YY ++++  +    D N   +E+     A V     
Sbjct: 325 TLISPDTLQDDRTQSTLKLNPDESYYRILVETNESKIFDKNGNPLEITPSMTATVDIRTG 384

Query: 419 NTTLAQEIIHPIT 431
             T+ Q +I PIT
Sbjct: 385 EKTIFQYLIKPIT 397


>gi|26991604|ref|NP_747029.1| HlyD family secretion protein [Pseudomonas putida KT2440]
 gi|24986695|gb|AAN70493.1|AE016691_1 HlyD family secretion protein [Pseudomonas putida KT2440]
          Length = 472

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 87/416 (20%), Positives = 165/416 (39%), Gaps = 33/416 (7%)

Query: 13  HPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           HP  L R    S++  IGL + W+ +  I++  S+ G+I+       I++    +++   
Sbjct: 51  HP--LPRYLQWSLLMFIGLALAWACIGEIDVIASAEGKIVPSGRSKLIQASEVAVVQSIH 108

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V +G  + +G  L+  E   T    D+K++  + L   ID  +++        DV   + 
Sbjct: 109 VVDGQPVRKGDVLVELEGQLTE--ADIKRLGSELLAAQIDQARASTLLSALDGDVAPAS- 165

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL----DLENKSSL 187
                 L   + +  +         +   Y  L+  L +  +    R       + ++  
Sbjct: 166 ------LAPLIPQATAAQQAGAQRWLEGQYLELQATLEQADAEIGQRAAEIRSAQGRADA 219

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           LR LL   ++     K LF ++AV+++   ++E    ++ LE    +  Q++ +  +N  
Sbjct: 220 LRQLLVITRQLTADYKLLFSESAVAKHTYLEKE----QARLEQERELALQRSRIDELNAA 275

Query: 248 YDEANLEFANYLKEISRDL----EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              A    +  + ++ R +     + QR  A    +L   E+    K + SP+ GT+   
Sbjct: 276 RLAAQHRRSGAIAQLRRAMLDLHGEAQRRIATLEQELNKAEQRHRLKVLTSPVDGTVQQL 335

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +       +Q LM IVP  +   +  KV  K I  V  G    V+   +   R    
Sbjct: 336 AIHTQGGVVTPAQTLMVIVPTGEPVEVEVKVENKDIGFVFPGQHVEVKIETFTFTRYGVV 395

Query: 364 KAIIEKI-DPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFP--AEVL 414
             ++E I D  I    + L     Y   +K+    L   DN++ L  G    AEV+
Sbjct: 396 PGVVESISDDAIEDDRHGL----LYSARIKLAKEALRVGDNDLPLTAGMAVRAEVI 447


>gi|308187572|ref|YP_003931703.1| type I secretion membrane fusion protein cyaD [Pantoea vagans C9-1]
 gi|308058082|gb|ADO10254.1| Putative type I secretion membrane fusion protein cyaD [Pantoea
           vagans C9-1]
          Length = 389

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 6/205 (2%)

Query: 189 RALLSSHQKDLT-MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           R L  S +++LT  + NL +   + Q++L   E +V K      E I     + R +++L
Sbjct: 139 RQLYESRRRNLTETISNLQQSLKLVQDELRLTEPLVAKGAAGQVEVIR----LRRQVSDL 194

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             + +    +YL     +  +N      ++      E    + T+ SP+ G +   Q  +
Sbjct: 195 RGKIDEARNDYLVRAHEEQVKNNAELDAQLQVAAGKEDQLTRATLYSPVRGIVKDIQVTT 254

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                +    LM+IVP      I  ++ P+ I +++ G  ATV+   Y           +
Sbjct: 255 VGGVLEPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLAATVKVTAYDSSIYGDLPGEV 314

Query: 368 EKIDPIISQQDNNLQTQEYYEVILK 392
           E + P  + QD   + Q YY V ++
Sbjct: 315 ETVSP-DTLQDEVKRDQYYYRVYVR 338


>gi|117618439|ref|YP_857208.1| HlyD family secretion protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559846|gb|ABK36794.1| secretion protein, HlyD family [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 472

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 68/337 (20%), Positives = 142/337 (42%), Gaps = 17/337 (5%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           I W+    ++      G+++    +  I++   GI+K+  V+ G  + +G PLL  +D  
Sbjct: 55  IVWAAWAELDEVTVGQGKVIPSRQLQVIQNLEGGIVKEIFVKEGDIVEKGQPLLRIDDTR 114

Query: 92  --------TTDLIDLKKVSIKNLRCHIDTE--KSALDFLNNKYDVLEKAFESREEQLLDF 141
                     +L+ LK   I  LR  I +   K+  +    +  V++K      +   + 
Sbjct: 115 FRSDFREREQELVTLKG-DIARLRSEIQSVVVKTGPNLGWREQVVVDKQPIDFPDGFENV 173

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             +Y +    V +  ++++   L +   ++       ++L  K   +   +   +++L +
Sbjct: 174 FAEYAAREKSVQDERLNNLNNQLYILGQQIEQKEQETIELNAKIRTVARSVDLARQELNI 233

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELREN---IHEQKNMLRHINELYDEANLEFANY 258
            + L ++  V Q +L + ER V +   EL  N   I +  ++LR      ++  L+F   
Sbjct: 234 SRPLAKEGIVPQVELIKLERQVNEMQGELESNRLLIPKLDSVLRETISKRNDIALKFR-- 291

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             +   +L + Q   +        L    ++ ++++P+ GTI   +  +     Q    L
Sbjct: 292 -ADSQTELNERQGKLSQLSEGQVGLRDRVDRTSVIAPLKGTIKKLKINTLGGVVQPGMDL 350

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           M+IVP      + AKV+PK I  ++ G  A V+   Y
Sbjct: 351 MEIVPLEDTLLVEAKVSPKDIAFLRPGLEAVVKITAY 387


>gi|78188717|ref|YP_379055.1| metalloprotease secretion protein [Chlorobium chlorochromatii CaD3]
 gi|78170916|gb|ABB28012.1| metalloprotease secretion protein [Chlorobium chlorochromatii CaD3]
          Length = 389

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 15/201 (7%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           + +Q+++   I E       + A    E+  D E++ R  A E++             I 
Sbjct: 189 LSQQRDLELKIAEFKSSTASQLAQVQLEVEADAEKS-RALAAELA----------DTEIR 237

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP +G +V  Q  +     Q  Q +M IVP  +   I AK+ P  I  V +G    + F 
Sbjct: 238 SPASGQVVGLQVQTVGAVIQPGQKIMDIVPLDESLLIDAKIAPHLIDSVHQGLAVDINFS 297

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQ---EYYEVILKITDLAFSD-NNIELRNGF 409
            +A   +   +  +E +   I     +  TQ    YY   + +T          E++ G 
Sbjct: 298 AFAHAPQLVVEGNVESVSKDIVTDPPSSGTQPGASYYLARIAVTKEGLKQLGKREMQPGM 357

Query: 410 PAEVLFTAKNTTLAQEIIHPI 430
           PA V+      +L   ++ P+
Sbjct: 358 PATVVIKTGERSLLTYLLDPL 378


>gi|10952796|gb|AAG25078.1| transporter component RzcD [Rhizobium leguminosarum bv. viciae]
          Length = 393

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 77/367 (20%), Positives = 132/367 (35%), Gaps = 45/367 (12%)

Query: 14  PASLKRMTLLSIIGII--GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           PAS  R  L+  I +   G + WS +   +I  ++ G+I     V  I+S   G      
Sbjct: 35  PASPIRTALIWFICLFTAGALIWSYIGTFDIVATAQGKIQPTGRVKVIQSIEVGKTIAVP 94

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-------- 123
           V NG+++  G  L+  +  E    ++    S+  LR  +    +AL  +N          
Sbjct: 95  VSNGAKVETGDILVELDPTEARVEVNTLTTSLAALRAEVARRGAALAEVNAWQRGDLWSG 154

Query: 124 ----------YDVLEKAFESREEQL----LDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                      D +     +REE L    L+ L     + +   N   ++V R  +M   
Sbjct: 155 TRRIEIVPEFADSIPAEIRTREELLYTSDLEQLASTLDSLAAQRNQQFAAVKRYTEMVTA 214

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +                  RAL+++    + M  NL + +A S++ +     I  K    
Sbjct: 215 Q------------------RALVATLADRVAMRSNLVDLSAGSRSGVIDAVEIRQKEEAT 256

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L E I ++      I     E       ++ + +       R   ++  +L    K  E 
Sbjct: 257 LAEQIGQRAEAETAIVTAASEGLKAIKTFVADNAEKQAAASREIDEKEQQLVKAAKRLES 316

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            TI SPI G +  +   +          LM+IVP      I A +  + I  V  G  A 
Sbjct: 317 MTIKSPINGIVQTSAITTVGQVVTAGAELMRIVPDDASLEIEAYLPNRDIGFVSPGQPAV 376

Query: 350 VR---FP 353
           ++   FP
Sbjct: 377 IKVEAFP 383


>gi|56476412|ref|YP_158001.1| HlyD family secretion protein [Aromatoleum aromaticum EbN1]
 gi|56312455|emb|CAI07100.1| HlyD family secretion protein [Aromatoleum aromaticum EbN1]
          Length = 473

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 104/238 (43%), Gaps = 25/238 (10%)

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L + + L +  AVS+ D+ + ER V +    LR +  +    +  I     EA     
Sbjct: 233 QELGVTRPLVKSGAVSEVDILRLERDVSR----LRGDRDQSTAQISRIQSAIAEAT---- 284

Query: 257 NYLKEISRDLEQNQRT-FADEMSKLTIL-EKTR------EQKTILSPIAGTIVYNQSFSS 308
             ++E+   +    R+  +D M++L  L E +R      +   + SP+ GT+      + 
Sbjct: 285 RKIQEVELSVRNEMRSELSDTMARLGSLSEGSRALADRVKHAEVRSPVRGTVKRLLVNTV 344

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q  + +++IVP      + A+V PK I  +  G  A V+F  Y        +A++E
Sbjct: 345 GGVVQPGREVVEIVPLDDALILEAQVKPKDIAFLHPGQAALVKFTAYDFAIYGGLEAMVE 404

Query: 369 KI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLA 423
           +I  D +   + N      +Y V ++    +  D  + +  G  AE+ + T K T L+
Sbjct: 405 QIGADTVTDDKGNA-----FYTVRVRTQKSSLGD-ELPIIPGMVAEIDILTGKKTILS 456


>gi|254423923|ref|ZP_05037641.1| auxiliary transport protein, MFP family [Synechococcus sp. PCC
           7335]
 gi|196191412|gb|EDX86376.1| auxiliary transport protein, MFP family [Synechococcus sp. PCC
           7335]
          Length = 528

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 78/376 (20%), Positives = 164/376 (43%), Gaps = 50/376 (13%)

Query: 23  LSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LSI+G+ +  +TW+ +  +E +V++ G++  E  V  +++P  G++++  V  G  + +G
Sbjct: 75  LSIMGVTVASVTWACIARVEETVAAQGKLEPEGVVQLVQAPVGGVVEEVLVTEGELVERG 134

Query: 82  TPLLTFEDIETTDLID-----LKKVSIKN--LRCHIDTEKSALDFLNNKYDVLEKAFESR 134
             + T ++  T   ++      +++S +N   R  +     A+       D++++  +  
Sbjct: 135 QVVATLDETATEAQLESNREIAERLSAENNYYRAQLSGVADAVAPAGISADLVQRGRD-- 192

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS---------------IYLNRL 179
             QLL     Y +  +   +         ++  L+R+ S               +   RL
Sbjct: 193 RAQLLQSNQLYQAQITGDTSGLSPDQLDRMETALSRLDSQQQINQLQSSQLSEQLKQTRL 252

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHE 236
            L N  S     L+++Q  L+ ++ L E+ AV++    QQE+ V  S  +   LR+ I  
Sbjct: 253 QLANAQS----ELATNQDILSRLRVLNEEGAVAELSYLQQEQEVNNSQTQVNTLRQEIDR 308

Query: 237 QKNMLRHINELYDEANLEFANYLK---------------EISRDLEQNQRTFADEMSKLT 281
               +   ++     + E    L+               ++++ L +N R  A+  S+  
Sbjct: 309 LSFQISQADQEVSRTSFESREVLQDRISVNNQRIAEIDSQLTQRLLENDRQLAELASQRA 368

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNY-AQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            L ++ + + + +P+ GT V+N   +   Y A  ++P+M+IVP   L   R  +  + I 
Sbjct: 369 QLAQSIKYQALTAPVDGT-VFNLKANRPGYVANSTEPIMEIVPQDALVA-RVFIPNRDIG 426

Query: 341 HVKKGYTATVRFPHYA 356
            V+ G    VR   Y+
Sbjct: 427 FVQVGQKVDVRIDAYS 442


>gi|167625829|ref|YP_001676123.1| HlyD family type I secretion membrane fusion protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167355851|gb|ABZ78464.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           halifaxensis HAW-EB4]
          Length = 460

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 80/409 (19%), Positives = 163/409 (39%), Gaps = 58/409 (14%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           ++  +  + PAS  R+T+ ++   II  + W+    ++   +  G+++    V  I+S  
Sbjct: 16  VYGAMMTDAPAS-HRLTIWALTALIITFLLWAYFAELDQVTTGMGKVIPSSQVQVIQSLD 74

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIE-TTDLI----DLKKVSIKNLRCHIDTEKSALD 118
            G++++  V+ G  + +G PL+  +     +D      ++  +S   +R + +     + 
Sbjct: 75  GGVLQEMYVQEGLIVTKGQPLVRIDATRFQSDFAQQEQEVNSLSANVIRLNAELNSITIS 134

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            + N +         RE+  +       S  + +F    SS+  S     +R R  Y+ R
Sbjct: 135 AITNDW---------REQVKI-------SPQALIFP---SSLEDSEPELTSRQREEYVGR 175

Query: 179 LD-------------------LENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDL 216
           LD                   ++  +S +R L +S Q   ++L + + L +K  V + +L
Sbjct: 176 LDNLSNQLEIQARQIQQRNQEIQELASKIRTLTTSFQLVSRELELTRPLADKGIVPEVEL 235

Query: 217 NQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
            + +R+V     EL         +LR  +    DEA L+    +   + D          
Sbjct: 236 LKLQRVVNDIQGEL-----ASLRLLRPKVKSTMDEAILKRRESVLIYAADTRAQLNEMQT 290

Query: 276 EMSKLTILEKTREQKT----ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           ++S++   +   + K     I+SP+ GT+      +     Q    +++IVP      I 
Sbjct: 291 KLSRMNEAQVGAQDKVSKAEIVSPVNGTVKTVHINTLGGVVQPGVDIIEIVPSEDKLLIE 350

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
            K+ PK I  +  G  A V+   Y   R      ++E I    +Q +  
Sbjct: 351 TKIVPKDIAFLHPGLPAVVKVTAYDFTRYGGLNGVVEHISADTTQDEEG 399


>gi|262373032|ref|ZP_06066311.1| membrane spanning export protein [Acinetobacter junii SH205]
 gi|262313057|gb|EEY94142.1| membrane spanning export protein [Acinetobacter junii SH205]
          Length = 395

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 141/362 (38%), Gaps = 79/362 (21%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL---ITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           N+    PA L R +L+  I  IGL   +TW+ L  +E   + +G+++       I+S   
Sbjct: 12  NVSYKEPA-LPRSSLVIWIVCIGLAIFLTWAWLFNLEEVSTGTGKVIPSSKEQTIQSLEG 70

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           GI+ K  V+ G  + +G  L   +         E+  L+   + +   LR  ++   + L
Sbjct: 71  GILTKLNVQEGDIVQKGEILAQLDQTRFASNVGESKSLLTSAQATAARLRAEVN--GTPL 128

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            F     +VL++    +EE  L     Y+S                              
Sbjct: 129 AF---PAEVLKEPKLVKEETAL-----YYS-----------------------------R 151

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R +LE   +  +  L   Q++L M + L  K A S+ ++             LR  +  +
Sbjct: 152 RENLEQSLAGYQQALQLVQQELMMTEPLVAKGAASEVEV-------------LR--LKRE 196

Query: 238 KNMLRHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTIL- 293
            N LR  N++ D  N  +    +E+S+   D+E  Q+        L        Q+ I  
Sbjct: 197 ANDLR--NKMNDTRNQYYVKAREELSKANTDIETQQQVVMGRSDSL--------QRAIFK 246

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P+ G I      +      Q+  LM IVP      I A+++P+ I  ++ G  A V+  
Sbjct: 247 APVRGVIKEIDVTTLGGVIPQNGKLMTIVPLEDKLLIEARISPRDIAFIRPGQEALVKIT 306

Query: 354 HY 355
            Y
Sbjct: 307 AY 308


>gi|298486725|ref|ZP_07004781.1| HlyD family secretion protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298158592|gb|EFH99656.1| HlyD family secretion protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 473

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 71/340 (20%), Positives = 139/340 (40%), Gaps = 42/340 (12%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I++  ++SG+I+       I+S  + ++K   V +G  +  G  LL  +   T+   D+ 
Sbjct: 78  IDVVATASGKIIPSGKTKTIQSSETAVVKAIHVRDGQSVKAGQLLLELD--STSADADVG 135

Query: 100 KVSIKNLRCHIDTEKSA--LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           +V    L   ID+ ++A  LD +N +     K        +LD     H   ++ +  G 
Sbjct: 136 RVRSDLLAARIDSARAAAMLDAINQR-----KPPRDLTGTILDA-DPMHVLAAERWLQGK 189

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL---LSSHQKDLTMM-------KNLFE 207
              YRS         S+ L   +++ + + ++A    ++S QK L +        +NL +
Sbjct: 190 YQEYRS---------SLDLVDAEIQQRQADIQAARIQVTSLQKTLPIATKLASDYENLLK 240

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD-- 265
           K  ++++   ++E    ++ L+L   +  Q+  +        EA       + +  R   
Sbjct: 241 KQYIARHAYLEKE----QARLDLERQLSVQQASVLQSTAARQEAERRREGVVAQTRRAML 296

Query: 266 --LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L+Q  +  A     LT      +  T+ +P+ GT+      +       +QPLM +VP
Sbjct: 297 DLLQQADQKIASFNQDLTKARYQEDLTTLEAPVDGTVQQLAVHTVGGVVTPAQPLMVLVP 356

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVR-----FPHYADI 358
             +   + A +  K +  V+ G   TV+     F  Y  I
Sbjct: 357 DGQPVEVEAMLENKDVGFVRAGQPVTVKVETFTFTKYGTI 396


>gi|172037107|ref|YP_001803608.1| HlyD family secretion protein [Cyanothece sp. ATCC 51142]
 gi|171698561|gb|ACB51542.1| putative HlyD-family secretion protein [Cyanothece sp. ATCC 51142]
          Length = 553

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 22  LLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           L +++G+    + W+ +  IE +V  +G++  E  V E+++P  G+I +  VE+G ++  
Sbjct: 46  LWTVMGVSSFGLGWACVAQIEQTVPVTGQLKPEGKVKEVQTPVGGVITQVHVEDGERVQP 105

Query: 81  GTPLLTFEDIET 92
           G  L+TF+   T
Sbjct: 106 GDLLVTFDTTNT 117



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 28/193 (14%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L ++ A +  D+NQQ + +  +  ++   I EQK +   +++   + N   A+    +  
Sbjct: 298 LSQREAEASLDMNQQRQTIQSTQADIDRLIQEQKRLQLELSQSQQKLNNIMADGETNLRG 357

Query: 265 DLEQNQRTFADEMSKLT--ILEKTREQKTILSPIAGT---------------IVYNQSFS 307
            +  N++  A+  S+LT  I+E  +    I S ++ T               +V++   S
Sbjct: 358 QIAANEQRLAEIYSQLTKRIVENKKRLSQIESELSQTKLNLTYQNLKADTSGVVFDLKAS 417

Query: 308 SSNY-AQQSQPLMKIVPHSKLTYIRAKV--TPKQIQHVKKGYTATVR-----FPHYADIR 359
              + A+ SQPL+KIVP     ++ A+V  T + I  VK+G    VR     F  Y DI+
Sbjct: 418 QPGFVAKASQPLLKIVPQD---FLIAEVFITNQDIGFVKEGMPVDVRIDSFNFSEYGDIQ 474

Query: 360 EKKFKAIIEKIDP 372
            K      + ++P
Sbjct: 475 GKIISIGKDALEP 487


>gi|209526057|ref|ZP_03274590.1| chromosome segregation ATPase-like protein [Arthrospira maxima
           CS-328]
 gi|209493583|gb|EDZ93905.1| chromosome segregation ATPase-like protein [Arthrospira maxima
           CS-328]
          Length = 625

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 69/326 (21%), Positives = 145/326 (44%), Gaps = 59/326 (18%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H F+W             + L+S   +I    W+    IE +V + G++       EI++
Sbjct: 21  HLFLWM------------IMLVSTTSVI----WAYFANIEQTVPAMGQLALTSGAREIQA 64

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD-FL 120
           P +G + +  VENG ++ +  P+LTF    T    DL+  +++ LR  ++ E    +  +
Sbjct: 65  PTTGAVVRLHVENGDRVERNQPILTFSP--TNPSADLR--AVETLRATLEKENEFYESIV 120

Query: 121 NNKYD----------VLEKAFESREEQLLDFLGK--YHSTCSKV-FN---YGISSVYRS- 163
           NN+            + ++   S+E Q L  L    YH   + + F+    G+ + YR+ 
Sbjct: 121 NNQITTNLPPQLADLIRDREARSQENQTLQSLVDELYHGRGTAMSFSPAMAGLVANYRAE 180

Query: 164 --LKMKLTRMRSIYLNRLDLENKSSLLRAL---------LSSHQKDLTMMKNLFEKN--- 209
              ++   +++ I L R   +N+ SL  A          L+  ++ L +  N   K+   
Sbjct: 181 YQSRVATGQLKIIELERQLQQNRDSLRAATEKLEYTQNQLTYSEQQLNLAGNQLSKSEEL 240

Query: 210 -AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            +V+++ L Q   +V +  +   +    ++ +LR  NE+  +      + +++   ++ Q
Sbjct: 241 LSVNESILAQISPLVEQGAMSDLQRKQREQEILRSQNEVIGQ-----QDRIEQRQGEINQ 295

Query: 269 NQRTFADEMSKLTILEKTREQKTILS 294
            +R   ++ +++  LE   EQ+T+ S
Sbjct: 296 RRREIQEQRAEIQRLE-NEEQRTLAS 320


>gi|312961579|ref|ZP_07776079.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
 gi|311284162|gb|EFQ62743.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
          Length = 413

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 87/450 (19%), Positives = 173/450 (38%), Gaps = 88/450 (19%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M+      L +  P S   + L++ + +IG++ W+    +E       +I++      I+
Sbjct: 22  MNDVQESLLSQTTPGSKLVLYLIAAVLVIGVV-WAYFARVEEITLGEAKIISLSREQVIQ 80

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIET--------TDLIDLKKVSIKNLRCHIDT 112
           S   GI+ +  V  G+ + +G  LL  +            + +I LK  SI  LR     
Sbjct: 81  SLEGGILLEMNVREGAVVEKGQVLLKIDPTRAESSYREVLSKVIGLK-ASIARLRSEAYQ 139

Query: 113 EKSALD-FLNNKYDVLE---KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           +    D  +    DV+    +A+ESR+               +  N  IS++ RS  +  
Sbjct: 140 QPLEFDDMVKQDPDVVAQETRAYESRK---------------RALNDSISALERSFTL-- 182

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
                                       +++ + + L  K  +S+ +L           L
Sbjct: 183 --------------------------SSREVRLAEPLAAKGLMSEVEL-----------L 205

Query: 229 ELRENIHEQKN-MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +R + ++ K+ ++  IN+   +AN E +    E+S+ + +N    AD           R
Sbjct: 206 RIRRSANDIKSQIVERINKFQADANSELSRLELELSQ-ISENLIGRAD----------IR 254

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           ++  I +P+ GT+   +  +     Q  + +++IVP  +   +  K+ P  +  ++ G  
Sbjct: 255 DRTVITAPVRGTVKNVRVSTIGGVIQPGEHILEIVPLEEQLLVEGKIRPSNVAFLRPGLA 314

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE----YYEVILKITD---LAFSD 400
           ATV+   Y        K  +E I P   + D    +      YY V++ +TD   L    
Sbjct: 315 ATVKITAYDYAIYGGLKGRVEHISPDTLKDDQKAASGRPDDTYYRVLV-LTDSSELTAGG 373

Query: 401 NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            ++ +  G  A V       T+   ++ P+
Sbjct: 374 KSLPIIPGMVASVEIRTGEKTILNYLLKPV 403


>gi|221066744|ref|ZP_03542849.1| type I secretion membrane fusion protein, HlyD family [Comamonas
           testosteroni KF-1]
 gi|220711767|gb|EED67135.1| type I secretion membrane fusion protein, HlyD family [Comamonas
           testosteroni KF-1]
          Length = 464

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 69/363 (19%), Positives = 156/363 (42%), Gaps = 42/363 (11%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           +W++L R       +  LL   GI  L+ + +  P+E  V +SG+++  D V  ++    
Sbjct: 46  LWRHLSR-------KQKLLGG-GIAALVLFGLFYPVENVVVASGQVIPSDRVQTVQHLEG 97

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-IDTEKSALDFLNNK 123
           GI+ K  V  G  + +  PLL   D+  + L +L++++ +      + T  +A     ++
Sbjct: 98  GIVTKVHVREGQAVTRSQPLLEI-DLGGSSL-NLEQLTARQATAEAVKTRLTA----ESQ 151

Query: 124 YDVLEKAF--ESREEQLLDF-LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             VL+  +   S + Q++   +G +    S+   +       S + +L + +       D
Sbjct: 152 GHVLKAEYFPTSLDPQIVQAEIGAF---ASRTLEH--QGTQASAQAQLMQAQG------D 200

Query: 181 LENKSSLLRALLSS---HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL-RENIHE 236
           +    + ++ L +S   H+++  + + L  +  + Q ++  ++R      LEL R ++  
Sbjct: 201 VAQAQARIQGLETSLRLHEQEAAISRQLAAEQLIGQLEVIDKQR-----ALELVRTDLAA 255

Query: 237 QKNML---RHINELYDEANLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + +L   R   E      LE    + +  S +L Q +R        ++  +  R +  +
Sbjct: 256 ARQILVSNRAKIEQAQAKKLETQGAFRRRASDELAQTERELLSLAEDISRAKSQRTRTIV 315

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           L+P  G +   +S  +    +  + ++++VP      + A++ P    +V  G +  V+ 
Sbjct: 316 LAPTEGVVKGLRSSGTGWVVKPGEAILEVVPVKDEVIVEAQLNPADRGYVHTGQSTKVKI 375

Query: 353 PHY 355
             Y
Sbjct: 376 SAY 378


>gi|291618156|ref|YP_003520898.1| LktD [Pantoea ananatis LMG 20103]
 gi|291153186|gb|ADD77770.1| LktD [Pantoea ananatis LMG 20103]
          Length = 388

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 86/205 (41%), Gaps = 6/205 (2%)

Query: 189 RALLSSHQKDLT-MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           R L  S +++LT  + NL +   + Q++L   E +V K      E I     + R +++L
Sbjct: 138 RQLYESRRRNLTETINNLQQSLRLVQDELRLTEPLVAKGAAGQVEVIR----LRRQVSDL 193

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             + +    +YL     +  +N      ++      E    + T+ SP+ G +   Q  +
Sbjct: 194 RGKIDEARNDYLVRAHEEQVKNNAELDAQLQVAAGKEDQLTRATLYSPVRGIVKDIQVTT 253

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                +    +M+IVP      I  ++ P+ I +++ G  A V+   Y          ++
Sbjct: 254 VGGVLEPGGKMMEIVPLEDQLLIETRINPRDIAYIRPGLAAVVKVTAYDSSIYGDLTGVV 313

Query: 368 EKIDPIISQQDNNLQTQEYYEVILK 392
           E + P  + QD   + Q YY V ++
Sbjct: 314 ETVSP-DTLQDEVKRDQYYYRVYVR 337


>gi|327394552|dbj|BAK11974.1| Leukotoxin secretion protein D LktD [Pantoea ananatis AJ13355]
          Length = 388

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 86/205 (41%), Gaps = 6/205 (2%)

Query: 189 RALLSSHQKDLT-MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           R L  S +++LT  + NL +   + Q++L   E +V K      E I     + R +++L
Sbjct: 138 RQLYESRRRNLTETINNLQQSLRLVQDELRLTEPLVAKGAAGQVEVIR----LRRQVSDL 193

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             + +    +YL     +  +N      ++      E    + T+ SP+ G +   Q  +
Sbjct: 194 RGKIDEARNDYLVRAHEEQVKNNAELDAQLQVAAGKEDQLTRATLYSPVRGIVKDIQVTT 253

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                +    +M+IVP      I  ++ P+ I +++ G  A V+   Y          ++
Sbjct: 254 VGGVLEPGGKMMEIVPLEDQLLIETRINPRDIAYIRPGLAAVVKVTAYDSSIYGDLTGVV 313

Query: 368 EKIDPIISQQDNNLQTQEYYEVILK 392
           E + P  + QD   + Q YY V ++
Sbjct: 314 ETVSP-DTLQDEVKRDQYYYRVYVR 337


>gi|170744700|ref|YP_001773355.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium sp. 4-46]
 gi|168198974|gb|ACA20921.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium sp. 4-46]
          Length = 466

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 76/444 (17%), Positives = 166/444 (37%), Gaps = 40/444 (9%)

Query: 14  PASLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P+   R T  ++I ++ G + W+    IEI  ++ G ++    V  ++   + +++   V
Sbjct: 33  PSPTLRATAWTLIALVAGTVAWACGSEIEIVATAPGRLVPVGEVKVVQPLETSVVRGIHV 92

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL------DFLNNKYDV 126
             G  +  G  L+  +  E +   DL+    + ++  +D E + L      D +  +   
Sbjct: 93  AEGDHVAAGQRLIDLDPTEVS--ADLEATRTERMQALLDAEAARLLLSEAEDPVIPRLPE 150

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +++A +   +  L      H          I+    +L  K          R++ E++++
Sbjct: 151 VDEALQGATQVQLRLQVAAHRATMGALRSEIADKQAALASK----------RVE-ESRNA 199

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L  L    +      K+LF +   S+  L Q E  +     + R    + + +   I  
Sbjct: 200 ELVPL---AEDRFATQKDLFARGNTSKLTLLQAEVDLIDKRADARALPEQARQLQAEIAG 256

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +     A++LKE +       R  A     L    +   ++ + +P++GTI   +  
Sbjct: 257 LEQKLAQARADFLKEAAEQRVTALRKVAVADQTLRKEREREAERHLTAPVSGTIQDLKVH 316

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       ++ L+ +VP      + A V  +++  V++G  A V+   +   R       
Sbjct: 317 TLGGVVSAAETLLTLVPDDMPLEVEASVAHREMGFVREGQRAEVKLEAFPFTRYGTVGGT 376

Query: 367 IEKIDPIISQQDNNLQTQEYYE---------------VILKITDLAFSDNNIELRNGFPA 411
           +  +    S Q   + T+   E               V L    +      + LR+G   
Sbjct: 377 VRLVGREASAQGGAMPTRPGEEPRGSGAGEESAYRVRVSLDRASVPTEGGAVALRSGMAV 436

Query: 412 EV-LFTAKNTTLAQEIIHPITDNW 434
           +  + T +   +A  ++ P+   W
Sbjct: 437 QADIMTGRRRVIAF-LVDPVLAGW 459


>gi|307320741|ref|ZP_07600153.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|306893668|gb|EFN24442.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
          Length = 401

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 144/368 (39%), Gaps = 40/368 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R    +++  T + I G++ +      L IEI     G+++    V  ++   +G I 
Sbjct: 6   IERPVSPTVRLTTWVLISGLVAIFVGGYWLKIEIVARGQGKVIPVSRVQLVQPQTNGRII 65

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY---- 124
           +  V  G  +  G  L+  + +     I L+   ++  R      +  +  L N      
Sbjct: 66  RILVTEGQPVKAGDLLVGMDTVSVESQIKLRLTEVRRQRRGATVARVIIAALTNVAVAND 125

Query: 125 DVL---EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           DVL     AFE RE   L+ +    +         I +V  SL+ ++ R+ +  L+R+  
Sbjct: 126 DVLAAGRAAFE-RERHDLEVIDGAEAL--------IEAVLTSLRDQVARINA-QLDRV-- 173

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLF-------EKNAVSQNDLNQQERIVYKSTLELRENI 234
           E      +A L   + DL +    F       +K A+S+ D    ER+  +   EL   I
Sbjct: 174 EQSRITQQARLQKARSDLDISSRKFLSAGKLKDKGAISEVDYF--ERLREQRARELEVLI 231

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK----TREQK 290
            E       +N L  EAN         IS  +E  Q+   +  + L  LE      R Q 
Sbjct: 232 SES-----ELNILAAEANALARQRQSIISTAVENYQKQLNEASTSLAGLEAELSAARNQL 286

Query: 291 TILS---PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +L+   P  G +     F+   + +    LM IVP      I A    + I  ++KG  
Sbjct: 287 ALLAIRAPADGKVENLTVFTIGGFVEAGSTLMSIVPSGDGMEIEAFFDNRDIGFLEKGQE 346

Query: 348 ATVRFPHY 355
           A V+F  +
Sbjct: 347 AFVKFDAF 354


>gi|109898973|ref|YP_662228.1| HlyD family type I secretion membrane fusion protein
           [Pseudoalteromonas atlantica T6c]
 gi|109701254|gb|ABG41174.1| type I secretion membrane fusion protein, HlyD family
           [Pseudoalteromonas atlantica T6c]
          Length = 473

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 94/438 (21%), Positives = 174/438 (39%), Gaps = 56/438 (12%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W+ L++N P   + +    +  +  L+ WS    +       G+++  + +  ++S   G
Sbjct: 53  WEQLQQN-PLKARMLLYFIVFALTALLIWSAYATLNEVTRGDGKVVPTNQLQIVQSYDGG 111

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK-------VSIKNLRCHIDTEKSALD 118
           I+K+     G  +  G  LL  +   T  +  L++       +S K  R    TEK+   
Sbjct: 112 IVKEILTREGQTVNAGDVLLKLD--PTRFISSLRENRSQFLSLSAKLARLKALTEKTPPI 169

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           F  N      +   S   Q       Y +   ++      + + S+  + TR R   L  
Sbjct: 170 FSANLVKQAPEIVSSERNQ-------YAANVEEL------AQHISMYQQQTRQREHELQE 216

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
                K   +R     H ++L + + L +  A+S  D+ + ER      +E+   I   +
Sbjct: 217 AQ-SAKEQYVRTKDLIH-RELAVTRPLLKSGAISDIDIIRLER----QLVEIEGEIKRNE 270

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTRE--------- 288
           +++R       EA  +     KE++         + DE+S ++I L   RE         
Sbjct: 271 SVMRRNESAIQEAKSKIRE--KELT-----TINGWRDELSDVSIELNSLRETESGLADVV 323

Query: 289 -QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            Q  + SP+ GTI    + +          +++I+P      + AK+ PK I  ++ G T
Sbjct: 324 YQADLKSPVKGTIKRLFTNTIGGVVPPGSDVIEIIPLDDQLIVEAKIKPKDIAFLRPGQT 383

Query: 348 ATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
           A V+F  Y  +     +A +  I  D I  + D     + YY V L+    +F  N +++
Sbjct: 384 AMVKFTAYDFVIYGGLEAEVTHISADTITDEND-----ETYYVVRLQTGSNSFK-NGMQI 437

Query: 406 RNGFPAEV-LFTAKNTTL 422
             G   +V + T K T L
Sbjct: 438 IPGMTTQVDIITGKKTVL 455


>gi|311105415|ref|YP_003978268.1| type I secretion membrane fusion protein, HlyD family protein
           [Achromobacter xylosoxidans A8]
 gi|310760104|gb|ADP15553.1| type I secretion membrane fusion protein, HlyD family protein
           [Achromobacter xylosoxidans A8]
          Length = 473

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 84/420 (20%), Positives = 170/420 (40%), Gaps = 37/420 (8%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +S++   GL+ W+    I+  V   G+++    V  I+S   GI+++  V  G ++  G 
Sbjct: 68  VSLLATGGLLLWAGTGSIDEVVRGEGKVVPSRQVQIIQSLDGGIVEEILVRPGQEVEAGE 127

Query: 83  PLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            LL  +       +   + + +S+      +    +   F+  + +VL +A       L+
Sbjct: 128 VLLKIDSTRFASSLGENNAEYMSLLAKAARLQALATGEPFVAPE-EVLTQA-----PGLV 181

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           +         +   N  ++     LK +   +R     R       SL         ++L
Sbjct: 182 EMERNVWQARTTELNATVNVAREQLKQRQEDLRETIAKRDQAAASCSL-------TSREL 234

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELR---ENIHEQKNMLRHINELYDEANLEFA 256
            + + L +  AVS+ DL + +R V +   E +     I   +  ++       EA L   
Sbjct: 235 QVTRPLLKSGAVSEVDLLRLQRDVARYCGEQKGAEAQIDRFQASIKEAESKLQEAELNIR 294

Query: 257 NYLK-EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI--VYNQSFSSSNYAQ 313
           N  + E+S   E N +       KL + ++ +  + + +P+ GT+  ++N +       Q
Sbjct: 295 NQARSELS---ETNTKLATLRQGKLALADRVKLAE-VRAPVRGTVKTLFNNTVG--GVVQ 348

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--D 371
             + +++IVP      +  ++ P+ I  +     A V+F  Y        +  +E+I  D
Sbjct: 349 PGKDIIEIVPKDDTLLLEVRIQPRDIGFLHADQKAEVKFTAYDFAIYGGLEGKVEQIGAD 408

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLAQEIIHPI 430
            +  ++ N+     YY V ++       D  + +  G  AEV + T K T L Q ++ PI
Sbjct: 409 TVTDEKGNS-----YYVVRVRTDRSTVGDKLLPIIPGMVAEVHILTGKRTVL-QYLLKPI 462


>gi|60615282|gb|AAX31148.1| putative HlyD family secretion protein [Burkholderia pseudomallei]
          Length = 471

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 84/417 (20%), Positives = 161/417 (38%), Gaps = 40/417 (9%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +I L+ W+    I+I  +  GE++    V ++ +   GI+++  V  G  + +G PL+  
Sbjct: 70  LIVLVLWATFFKIDIIAAGQGEVIPSTTVQQLSTLEGGIVRELLVREGQIVKKGQPLVRL 129

Query: 88  EDIETTDLIDLKKV-------SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           + +     +  +         SI  L+   D + + L     K +++     S EE +  
Sbjct: 130 DPVVAQGAVTEQAATREGLMASIARLQAEADGKATPLYPAGLKPEIV-----SEEEHV-- 182

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDL 199
                 +  ++  N  I  + +    K       Y  R+    N   LL          +
Sbjct: 183 -----RAQRAEALNSTIEVLQQQRAAKQAEAAD-YRGRIPQYVNNQHLL-------DDQI 229

Query: 200 TMMKNLFEKNAVSQNDLN--QQERI-VYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             M  L    +V+ N++   Q+ER  +    +  RE   +    +   +   +E    F 
Sbjct: 230 QRMLPLVGVGSVAPNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKIEEKISTFR 289

Query: 257 NYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           +  +E ++R   Q Q        K  IL++T     I SP+ G +      +    A   
Sbjct: 290 SEAREELARKQVQLQALEGTLSGKQDILDRT----LIRSPVNGIVKTLYITTIGGVASPG 345

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + ++ IVP +    I A++ P+ I +++ G  A VR   +         A +E I P   
Sbjct: 346 KSVIDIVPTNDSLLIEARIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELISP--D 403

Query: 376 QQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            Q +      YY+V ++   + +A    ++ +  G  AEV       T+   I+ PI
Sbjct: 404 SQADERSGSLYYKVQVRTHSSVVATQVGDLNILPGMVAEVDVITGRRTIMSYILRPI 460


>gi|300722354|ref|YP_003711640.1| RTX toxin ABC transporter protein RtxD [Xenorhabdus nematophila
           ATCC 19061]
 gi|297628857|emb|CBJ89440.1| RTX toxin ABC transporter protein RtxD [Xenorhabdus nematophila
           ATCC 19061]
          Length = 475

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 77/369 (20%), Positives = 156/369 (42%), Gaps = 36/369 (9%)

Query: 9   LKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L +  P+   R T +S+ +G++  + W+ +  +++  +++G ++       I++     I
Sbjct: 53  LSQRPPSPFARYTAISLSMGVLIALIWAYMGKLDVQATATGRLIASGRSQIIQAYEQSRI 112

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V NG  + +  PL+T   +      D+ ++ I+      + E      LN     L
Sbjct: 113 VAIHVGNGQHVEKDAPLITLHTLGVNQ--DITRL-IEQRDYQTEEEIRYQALLNTHDPNL 169

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
              F+ + E+    +  ++    + F+  I+++Y  +++ LT  ++          ++S 
Sbjct: 170 LPLFQQQSEERQKKILLHYQHEKQEFDSIITNIYAEMEVNLTSQKA----------RNSD 219

Query: 188 LRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +R+L +  +   + L   K L +K  +S+ +  +QE    K  LE    I +QK+ L  +
Sbjct: 220 IRSLTNLRENISQRLQARKTLSQKQVISKVEYLEQE----KEFLETERLIAQQKSELGIL 275

Query: 245 NELYD--EANLEFANYLKEIS-----RDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              Y   E  L+     KE       +  E        E+SK+   ++  E + + SP+ 
Sbjct: 276 IAQYKSHEGRLKSTKVQKEREWLEKIKQAEMQLSLLKQEISKV---QEREELEIVRSPVT 332

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           GT+      +     Q +Q LM IVP   +     ++  K +  V+ G   TV+   FP+
Sbjct: 333 GTVQQLSVHTLGAVLQPAQNLMVIVPDEHVQLAEIQILNKDVGFVRPGQQVTVKVDAFPY 392

Query: 355 --YADIREK 361
             Y  I  K
Sbjct: 393 TRYGTIEGK 401


>gi|126740838|ref|ZP_01756523.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. SK209-2-6]
 gi|126718134|gb|EBA14851.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. SK209-2-6]
          Length = 438

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 86/437 (19%), Positives = 175/437 (40%), Gaps = 55/437 (12%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           IIG   W+    I  +V +SG I  + N   ++    GI+   +V+ G  + +G  LL  
Sbjct: 28  IIGFGAWAGFSSISGAVIASGRIEVDRNRQVVQHLDGGIVAGIRVDEGDTVSEGDVLLRL 87

Query: 88  EDIETTDLIDLKK---VSIKNLRCHIDTEK---SALDF-------LNNKYDVLEKAFESR 134
           +  E    + + +     I   R  ++ E+   S + F       LN++ ++ E A    
Sbjct: 88  DAKELQSQLAITEGQLFEIMARRGRLEAERDGASEISFDAGLQEHLNDRAEIRELA---- 143

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E Q+  F  +  ST  ++           L+ +  ++       L  ++ S L  AL++ 
Sbjct: 144 EGQVRLFKARAESTSREI---------EQLEKRRVQISDQITGVLAQQDSSRLQLALIAE 194

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             K+    + L E+       +    R     + +L E +  +      I E+ D   L+
Sbjct: 195 ELKN---QETLLERGLAQAGTVLNLRRTEADLSGQLGELVAAEAQAQGRITEI-DIEILK 250

Query: 255 FANYLKEIS----RDLE-------QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                +E +    RDL        + +RT+ + +++L I           +P++G IVY 
Sbjct: 251 LGTSQREEAITQLRDLRYQELELSETRRTYLERLARLEIT----------APVSG-IVYG 299

Query: 304 QSF-SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +  +  + ++P++ ++P  +   I A+V P  I  +  G   T+RF          
Sbjct: 300 LAVHTPRSVIRPAEPVLYLIPQDRPLVIAAQVAPTDIDQIFVGQEVTLRFSALDQRNTPD 359

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF-TAKNTT 421
               + ++     + +    +    E++L   ++A       L  G P E    TA+ + 
Sbjct: 360 LFGTVMQVSADAFEDEGTGFSFYRAEILLNEGEMARLPEGAVLIPGMPVESFIRTAERSP 419

Query: 422 LAQEIIHPITDNWPKIF 438
           LA  ++ P++D + + F
Sbjct: 420 LAY-LVKPLSDYFVRAF 435


>gi|300866604|ref|ZP_07111292.1| chromosome segregation ATPase-like protein [Oscillatoria sp. PCC
           6506]
 gi|300335376|emb|CBN56452.1| chromosome segregation ATPase-like protein [Oscillatoria sp. PCC
           6506]
          Length = 666

 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W+ L  IE +V + G++  +D   +I++P +G + +  VE+G ++ +  PLLTF    
Sbjct: 35  LVWAYLAKIEQAVPAVGQLELKDGSRDIQAPTTGAVVRLHVEDGDRVEKNQPLLTFSPTA 94

Query: 92  -TTDLIDLKKV 101
              DL  +KKV
Sbjct: 95  PGADLDSVKKV 105


>gi|15964852|ref|NP_385205.1| putative toxin secretion transmembrane protein [Sinorhizobium
           meliloti 1021]
 gi|307300923|ref|ZP_07580692.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
 gi|15074031|emb|CAC45678.1| Putative secretion membrane fusion protein [Sinorhizobium meliloti
           1021]
 gi|306903878|gb|EFN34464.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
          Length = 440

 Score = 45.8 bits (107), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 143/368 (38%), Gaps = 40/368 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R    +++  T + I G++ +      L IEI     G+++    V  ++   +G I 
Sbjct: 6   IERPVSPTVRLTTWVLISGLVAIFVGGYWLKIEIVARGQGKVIPVSRVQLVQPQTNGRII 65

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY---- 124
           +  V  G  +  G  L+  + +     I L+   ++  R      +  +  L N      
Sbjct: 66  RILVTEGQPVKAGDLLVGMDTVSVESQIKLRLTEVRRQRRGATVARVIIAALTNVAVAND 125

Query: 125 DVL---EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           DVL     AFE RE   L+ +    +         I +V  SL+ ++ R+ +  L+R+  
Sbjct: 126 DVLAAGRAAFE-RERHDLEVIDGAEAL--------IEAVLTSLRDQVARINA-QLDRV-- 173

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLF-------EKNAVSQNDLNQQERIVYKSTLELRENI 234
           E      +A L   + DL +    F       +K A+S+ D    ER+  +   EL   I
Sbjct: 174 EQSRITQQARLQKARSDLDISSRKFLSAGKLKDKGAISEVDYF--ERLREQRARELEVLI 231

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE----KTREQK 290
            E       +N L  EAN         IS  +E  Q+   +  + L  LE      R Q 
Sbjct: 232 SES-----ELNILAAEANALARQRQSIISTAVENYQKQLNEASTSLAGLEAELSAARNQL 286

Query: 291 TIL---SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +L   +P  G +     F+   + +    LM IVP      I A    + I  + KG  
Sbjct: 287 ALLAIRAPADGKVENLTVFTIGGFVEAGSTLMSIVPSGDGMEIEAFFDNRDIGFLAKGQE 346

Query: 348 ATVRFPHY 355
           A V+F  +
Sbjct: 347 AFVKFDAF 354


>gi|238025601|ref|YP_002909833.1| Type I secretion membrane fusion protein, HlyD family protein
           [Burkholderia glumae BGR1]
 gi|237880266|gb|ACR32597.1| Type I secretion membrane fusion protein, HlyD family protein
           [Burkholderia glumae BGR1]
          Length = 472

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 70/361 (19%), Positives = 148/361 (40%), Gaps = 44/361 (12%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           HPA      ++ ++ +I ++  +    ++I  +++G+++ +  V  I+   +G++++  V
Sbjct: 54  HPAPRWAARVIILLVVIAVLI-ACFAKLDIVATATGKLVPDARVKVIQPAITGVVREIAV 112

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            +G ++  G                       +L   +DT ++A D  N +    + AF 
Sbjct: 113 RDGQRVRAG-----------------------DLLVKLDTTQAAADEENARSSRFDAAFA 149

Query: 133 S-REEQLLDFLGKYH----STCSKV-------FNYGISSVYRSLKMKLTRMRSIYLNR-L 179
           + R + LLD L + H    ST +           + +  +YR  + KL   R+    R  
Sbjct: 150 AARSQALLDALQEGHAPRVSTIAGASADRQAEAQHLVDGMYREYEDKLGSARAELAKREA 209

Query: 180 DLENKSSLLRALLSSHQKDLTMM---KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           +L++    +  L ++     T     K+L     V+Q+D   +E+       EL      
Sbjct: 210 ELDSTRQEIAKLAATAPLARTQANDYKSLAVDKYVAQSDYLDKEQAALNQEHELAAQRSH 269

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +   I E   +     + + +E   DLE+         +  T     +E  ++ +P+
Sbjct: 270 ARELAAGIVEQQSDIAQTISQFRRERLDDLEKATEQLTQSSNDETKAHTRKELLSLTAPV 329

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FP 353
           +GT+    + +       +Q LM+IVP   +  + A +  K +  +K G  A V+   FP
Sbjct: 330 SGTVQQLATHTLGGVVTTAQSLMEIVPDDAVE-VEATIENKDVGFLKIGQHAAVKLDAFP 388

Query: 354 H 354
           +
Sbjct: 389 Y 389


>gi|229522600|ref|ZP_04412016.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae TM 11079-80]
 gi|229340585|gb|EEO05591.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae TM 11079-80]
          Length = 463

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 85/436 (19%), Positives = 178/436 (40%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +  + +   I  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 27  NTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + +L  ++    +++  +     +++++F
Sbjct: 87  VREGEQVQKGQQLILIDDTRFRSDFREREQQVASLTANVLQLSASISSV-----IIDESF 141

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           E +     ++        SK+ F   +S     L   + R R+ Y   LD L N+ S+L 
Sbjct: 142 EEK-----NWTNSVRLDYSKLAFPPVLSDSQPDL---VERQRAQYRQDLDNLRNQLSVLS 193

Query: 190 ALLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+DL      + NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 194 QQIQQKQQDLIEAEARILNLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRR 253

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S LT     LE    
Sbjct: 254 ELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVN 313

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ G +      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 314 RTVVVSPVTGAVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPELPA 373

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  D +   D N+ +  
Sbjct: 374 IVKFSAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKDTSLGHDQNLPIIP 430

Query: 408 GFPAEV-LFTAKNTTL 422
           G  A V + T K T L
Sbjct: 431 GMTASVDIITGKRTVL 446


>gi|70733643|ref|YP_257283.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
 gi|68347942|gb|AAY95548.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
          Length = 455

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 93/445 (20%), Positives = 176/445 (39%), Gaps = 72/445 (16%)

Query: 19  RMTLLSIIGIIG----LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           R+  L+I GII     L+ W+    I+      G+ +    + +I++   GI+ +  V+ 
Sbjct: 39  RVIRLTIWGIIAFFLFLVLWANFAVIDEVTKGEGKAIPSSKLQKIQNLEGGIVSELYVKE 98

Query: 75  GSQILQGTPLLTFED------IETTDLIDLKKV-SIKNLRCHIDTEKSALDFLNNKYDVL 127
           G  +  G PL+  +D      +  T+ + L  +  ++ L   +D  +     LN   + +
Sbjct: 99  GQIVEAGAPLIRLDDTRFQSNVGETETVRLSMLLRVERLSAEVDERE-----LNFPAEAV 153

Query: 128 EKA----------FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           ++A          ++SR +QL D +G                +   L  K   +R     
Sbjct: 154 KEAPGQAASEKSLYQSRRQQLHDEIG---------------GLQEQLIQKQQELR----- 193

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI-------VYKSTLEL 230
             +  +K +  R  L   ++++ M + L  + AVS  ++ + +R        +  +TL +
Sbjct: 194 --EFTSKQAQYRQQLGLQRQEIAMSEPLVAQGAVSPVEVLRLKRAEVETRGQLDATTLAI 251

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                  K + R I+E   +   E    L E   +L +   T          LE    + 
Sbjct: 252 PRAESAIKEVQRKIDETRGKFRSEALTQLNEARTELNKASATG-------KALEDRVSRT 304

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + SP+ G +      +     Q    +++IVP      + AK+ P+ I  +  G  A V
Sbjct: 305 LVTSPVRGIVKQLMVNTIGGVIQPGSDMVEIVPLDDTLLVEAKIRPQDIAFLHPGQEAVV 364

Query: 351 RFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITD---LAFSDNNIELR 406
           +F  Y        KA +E+I    I+ +D       YY + L+ TD   L   +  + + 
Sbjct: 365 KFSAYDYTIYGGLKARLEQIGADTITDEDKKTT---YYMIKLR-TDRSHLGTDEKPLLII 420

Query: 407 NGFPAEV-LFTAKNTTLAQEIIHPI 430
            G  A V + T K + L+  ++ PI
Sbjct: 421 PGMVASVDIITGKKSILSY-LLKPI 444


>gi|66046306|ref|YP_236147.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae B728a]
 gi|63257013|gb|AAY38109.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae B728a]
          Length = 473

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 71/340 (20%), Positives = 138/340 (40%), Gaps = 42/340 (12%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I++  ++SG+I+       I+S  + ++K   V +G  +  G  LL  +   T+   D+ 
Sbjct: 78  IDVVATASGKIIPSGKTKTIQSSETAVVKAIHVRDGQSVKAGQLLLELD--STSADADVG 135

Query: 100 KVSIKNLRCHIDTEKSA--LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           +V    L   ID+ ++A  LD +N +     K        +LD     H   ++ +  G 
Sbjct: 136 RVRSDLLAARIDSARAAAMLDAINQR-----KPPRDLTGTILD-ADPMHVLAAERWLQGQ 189

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL---LSSHQKDLTMM-------KNLFE 207
              YRS         S+ L   +++ + + ++A    + S QK L +        +NL +
Sbjct: 190 YQEYRS---------SLDLVDAEIQQRQADIQAARIQVMSLQKTLPIATKLASDYENLLK 240

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD-- 265
           K  ++++   ++E    ++ L+L   +  Q+  +        EA       + +  R   
Sbjct: 241 KQYIARHAYLEKE----QARLDLERQLSVQQASVLQSTAARQEAERRREGVVAQTRRAML 296

Query: 266 --LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L+Q  +  A     LT      +  T+ +P+ GT+      +       +QPLM +VP
Sbjct: 297 DLLQQADQKIASFNQDLTKARYQEDLTTLEAPVDGTVQQLAVHTVGGVVTPAQPLMVLVP 356

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVR-----FPHYADI 358
             +   + A +  K +  V+ G   TV+     F  Y  I
Sbjct: 357 DGQPVEVEAMLENKDVGFVRAGQAVTVKVETFTFTKYGTI 396


>gi|74207916|dbj|BAE29084.1| unnamed protein product [Mus musculus]
          Length = 491

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 77/356 (21%), Positives = 152/356 (42%), Gaps = 58/356 (16%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           I W+    ++    + GE++    V  ++S   G I+  +V+ G ++ QG  L+  +   
Sbjct: 66  IAWAHFSKVDEVAVAPGELIPSVQVRPVRSLAGGTIRSVKVKEGDRVKQGDSLIELDAAL 125

Query: 92  TTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
               ID    S K +R     ++TE+     +    D L  A      +L +F     + 
Sbjct: 126 PQTEIDRLDKSAKLIRLDIARLETERKERLTVGGLKDQLLAA------RLREFDSLQAAA 179

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V         +S  +   ++RS  L     EN S+  + L ++ +K+   ++ L + 
Sbjct: 180 TAEVNR-------QSAAVSAAKIRSARLQ----ENLSNAKKNLANARKKE-QGLRTLIKD 227

Query: 209 NAVSQ-NDLNQQERIVYKSTLE-----LRENIHEQKNMLRHINELYDEANLEFANY---- 258
            A+++ N ++ Q+ ++   +LE     L ++I  Q+  +R I + Y  A    A      
Sbjct: 228 GAITRLNYIDAQDNVI---SLEDKVNSLEKDIAAQEQEVRQIKQAYLSAQKSAARMGSAR 284

Query: 259 -------LKEISRD----LEQ-NQRTFADEMSKLTILE-------KTREQKTILSPIAGT 299
                  L + S+D    L Q NQR+      +LT +E       + RE++TI +P+ GT
Sbjct: 285 QSETLTQLDDRSKDRGGILTQINQRS-----EELTTIEGQLKQARQERERETIKAPVTGT 339

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           I   +  ++    Q  + L+ ++P  +   +  KV  + I  +  G  A V+   +
Sbjct: 340 IYNVKITTAEGTVQPDKELLSVLPEDQELLLEVKVLNRDIGFISPGMKAKVKMASF 395


>gi|332715679|ref|YP_004443145.1| HlyD family type I secretion membrane fusion protein [Agrobacterium
           sp. H13-3]
 gi|325062364|gb|ADY66054.1| type I secretion membrane fusion protein, HlyD family
           [Agrobacterium sp. H13-3]
          Length = 495

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 86/386 (22%), Positives = 146/386 (37%), Gaps = 24/386 (6%)

Query: 14  PASLKRMTLLSIIGIIG--LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           P S  R+  L  I ++   L+ W      +I  ++ G+I     V  I+S   G      
Sbjct: 39  PQSPVRIAFLWFICVLATSLLVWGWFGKFDIVATAQGKIQPVGRVKIIESLEHGKTSSVV 98

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V NG  I  G  +   +D ET      K  S+  L+  I       + L    + L +  
Sbjct: 99  VGNGDIITAGDVVAELDDTETRADEVAKSGSLNTLQAEILRRTVFREVLAGAKNSLWQQS 158

Query: 132 ESREEQLLDFLGKYHSTC----SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +     +L F G   +        VF   +  V+ ++     + R        L      
Sbjct: 159 DGSGYPVLAFPGNISALIRLREQTVFEADLRGVWANIHSLAAQRRQREDQIAGLTEAIES 218

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTL-----ELRENIHEQKNM 240
            R L+ + ++ + M   L +  A SQ ++    QE    KS L     +L     E K +
Sbjct: 219 QRELVQTLEQRVNMRSQLLQSRAGSQVEVFDATQEYQEAKSALADKLAQLMGAKSEVKVV 278

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGT 299
           +    ++ + A  + AN   E  R +        DE+ +  I  K+R Q+  I SPI G 
Sbjct: 279 MAEAEKVVETAAADNANRWLEAQRAM--------DELEQELIKVKSRRQRLQIRSPIDGV 330

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +  +   +       +  LM+IVP   +  I A +  K I  V+   +A ++   Y   R
Sbjct: 331 VQLSSITAVGQVVAANTELMRIVPLDSVLEIEAYLPNKDIGFVEPQQSAVIKIEAYPYTR 390

Query: 360 EKKFKAIIEKI--DPIISQQDNNLQT 383
               K  +++I  D I      NL++
Sbjct: 391 FGVLKGEVKRISSDAIPEPDAQNLES 416


>gi|2952088|gb|AAC38257.1| zinc-protease transporter [Pseudomonas fluorescens]
          Length = 437

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 79/425 (18%), Positives = 165/425 (38%), Gaps = 34/425 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEIL--NEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           LL+++G  G   W+ L P++  +   G ++   +   V+  SP  G++ +  V++G ++ 
Sbjct: 24  LLTVVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTFSP--GVVSRILVKDGERVK 81

Query: 80  QGTPLLTFEDIE-TTDLIDLKK------VSIKNLRCHIDTEKSALDF---LNNKYDVLEK 129
           QG PL   +  +   D+  L+        S+   +   D + SA+ F   L++  D    
Sbjct: 82  QGQPLFRLDQTQHQADVQSLQAQYRMAWASVARWQSERDNQ-SAITFPAELSSSPDPALA 140

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                + QL        S+  + F    + +  +++    ++  +   R DL  ++  LR
Sbjct: 141 LVLEGQRQLF-------SSRREAFAREQAGIRANIEGATAQLNGMRRARSDLTAQAQSLR 193

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             LS+       ++ L +   + +N L + +R + +   +L +N  E   + + I E   
Sbjct: 194 DQLSN-------LQPLADNGYIPRNRLMEYQRQLSQVQQDLAQNTGESGRVEQGILESRL 246

Query: 250 EANLEFANYLKEISRDLEQNQ-RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +       Y KE+   L   Q R+   E  +LT      +   I +P  G  V     + 
Sbjct: 247 KLQQHSEEYQKEVRSQLADAQLRSLTLEQ-QLTSAGFDLQHSEINAPADGIAVNLSVHTE 305

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +  + L++IVP      +   +    +  V       + F  +   R  +    + 
Sbjct: 306 GAVVRAGETLLEIVPQGTRLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGEVS 365

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEII 427
            I     Q  +      YY +   +++ A    + + ++ G PAE+       +L   + 
Sbjct: 366 LIS--ADQMLDEKTGAPYYVLRTTVSEAALEKLHGLVIKPGMPAEMFVRTGERSLLNYLF 423

Query: 428 HPITD 432
            P+ D
Sbjct: 424 KPLLD 428


>gi|171058443|ref|YP_001790792.1| HlyD family type I secretion membrane fusion protein [Leptothrix
           cholodnii SP-6]
 gi|170775888|gb|ACB34027.1| type I secretion membrane fusion protein, HlyD family [Leptothrix
           cholodnii SP-6]
          Length = 453

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 79/429 (18%), Positives = 173/429 (40%), Gaps = 38/429 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           L+  + ++  + W    P+  +V +SG +  + N   ++    G ++   V +G ++  G
Sbjct: 34  LIGGVLLLPALAWLSFAPLASAVVASGHVKVDLNRSIVQHAEGGTVRAVYVRDGQKVRAG 93

Query: 82  TPLLTFEDI----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF------ 131
            PL+   D+    + T L+         L   ++TE++    L    +++          
Sbjct: 94  DPLIELGDVSVNADKTRLMQRLLAERAGL-ARLETEQAGGKTLAYPPELIAAGRDDPVVR 152

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRA 190
           E  +++L  F  + H+  S+    G+          L + R+ I      L+ +    R 
Sbjct: 153 EHMDKELALFTARLHALDSQA---GL----------LVKQRAKIQQEIASLQAQIGNARD 199

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            + +  ++L +  +L ++  VS+  + Q E  +     ++ E   E     + I ++   
Sbjct: 200 SIQAQSRELALNTSLAKQGLVSETQVMQLEASIADYRGKMAERSAEMARADQRIGDIELR 259

Query: 251 ANLEFANYLKEISRDLE-QNQRT--FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            +    +Y ++ S  L+  N R      E+ K T   K   ++ + + + G ++  +  S
Sbjct: 260 LSQSRNDYRQQASDQLKVANVRVQEIEQELRKATDASK---RQVLSASVDGEVIGLRITS 316

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                   +P+ +IVP +    + A++  + I  V++G  A +RF  +     +  K  +
Sbjct: 317 PGGVIAPREPVGEIVPANPRLVVEAQIRTEDINRVQRGQGADLRFTAFKYRTTQMVKGSV 376

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAF-----SDNNIELRNGFPAEVLFTAKNTTL 422
             +     +Q +      YY V + +   A       + +  L+ G PAEV    +  T 
Sbjct: 377 SYVG--ADRQVDKDNGMAYYVVTIDVPPDAIERAVTGEAHARLQAGMPAEVYLHGEERTP 434

Query: 423 AQEIIHPIT 431
            Q ++ PIT
Sbjct: 435 LQYLMEPIT 443


>gi|186683894|ref|YP_001867090.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186466346|gb|ACC82147.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 484

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 52/241 (21%), Positives = 104/241 (43%), Gaps = 26/241 (10%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           +TWS L  I I+V+ +G I+    +   +SP +G ++   V  G  + +G  L T +  E
Sbjct: 49  LTWSFLGRIPITVTGTGIIVYPSTITSFQSPIAGKLRTINVRAGDYVNRGDVLATLDQGE 108

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTCS 150
               + L    +++    + TE SA   +  +    +K A + + + L   L        
Sbjct: 109 LMKQLQL----VRSKLGQLPTEDSAASLVQGQRQNADKEAIKQQRQSLQQNLQAVQKLTP 164

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +   G++S+ R              +R +       LR LL + ++ LT  + L ++ A
Sbjct: 165 ILREKGLNSIQR--------------DRANQTQSLQALRDLLPTFKQRLTNRQQLLQEGA 210

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISRDLE 267
           +S + + Q +    +  L     I+E ++ L+ ++    +A    LE  N +K++   L+
Sbjct: 211 ISGDTVLQSQ----QDYLNAVTQINEAESQLKQLDVKEADAQRQYLENLNSIKDLQAQLK 266

Query: 268 Q 268
           Q
Sbjct: 267 Q 267


>gi|187735875|ref|YP_001877987.1| secretion protein HlyD family protein [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425927|gb|ACD05206.1| secretion protein HlyD family protein [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 340

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 13/170 (7%)

Query: 251 ANLEFANYLKEI----SR--DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           ANL+ A    E+    SR  D+ Q    +    + LTI E+  +   + +P  G +V N+
Sbjct: 159 ANLDVARKQLELLLAGSREEDVAQALAQYNQAKASLTIREQNLKDAVLYAPGNG-VVRNR 217

Query: 305 SFSSSNYAQQSQPLMKI-VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                + A   +P+  I + H+K  ++RA +T  Q+  VK G++ATVR   + D     F
Sbjct: 218 ILEKGDMASPQKPVYNISLNHTK--WVRAYLTESQLGKVKPGFSATVRNDSFPDT---GF 272

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           K  +  I  +      N++T +    ++    +   D +  LR G PA V
Sbjct: 273 KGTVGFISSVAEFTPKNVETPDLRTALVYEVRIIVDDPDNRLRLGAPATV 322


>gi|84386483|ref|ZP_00989510.1| RTX toxin transporter [Vibrio splendidus 12B01]
 gi|84378588|gb|EAP95444.1| RTX toxin transporter [Vibrio splendidus 12B01]
          Length = 453

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 72/365 (19%), Positives = 157/365 (43%), Gaps = 44/365 (12%)

Query: 9   LKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L +  P+   R+T +++ +G++ ++ W+    +++  +++G  +       I+S     +
Sbjct: 31  LSQRPPSPFARLTAITLSLGVMAVLLWAYWGKLDVQATATGRFVVSGRSQVIQSYEQSRV 90

Query: 68  KKFQVENGSQILQGTPLLTFEDI----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
               V++G ++ +G PLLT + +    + T LI   +     L  +    +S    L   
Sbjct: 91  LSIHVKDGQRVDKGAPLLTLDTLGINQDITRLITQSEYQTNELVRY----RSLNSGLPLS 146

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D+L     S ++ L++   + H +  + +   ++S+   +          ++N      
Sbjct: 147 KDLLFSTLPSAQQTLIN---ENHLSEKREYESTLASIKAEM----------HVNNASQAA 193

Query: 184 KSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           + S + AL+   +   + L   K L +   +   +  +QE    K  LE++  + +Q+  
Sbjct: 194 RQSDINALIQLTENISQRLAARKTLNQIKVIGHVEYLEQE----KELLEVQRQVSQQRAE 249

Query: 241 LRHINELYDEANLEFANYLKEISRD-LEQNQRT------FADEMSKLTILEKTREQKTIL 293
           L  +   Y         +  +  R+ LE+ ++        A E+SK+    + REQ  I+
Sbjct: 250 LEVLKSQYHSLEERLTGFKAQKQREWLEKRKQAKLQLVGLAQELSKV----REREQLEII 305

Query: 294 -SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR- 351
            SP+ GT+     ++     Q +Q LM IVP + +     ++  K +  V  G + TV+ 
Sbjct: 306 RSPVDGTVQQLSIYTLGAVLQPAQNLMIIVPGNSVQQAEIQILNKDVGFVYPGQSVTVKV 365

Query: 352 --FPH 354
             FP+
Sbjct: 366 DAFPY 370


>gi|77464472|ref|YP_353976.1| RTX secretion protein D [Rhodobacter sphaeroides 2.4.1]
 gi|126463312|ref|YP_001044426.1| HlyD family type I secretion membrane fusion protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221640364|ref|YP_002526626.1| Type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sphaeroides KD131]
 gi|77388890|gb|ABA80075.1| RTX secretion protein D, HlyD family [Rhodobacter sphaeroides
           2.4.1]
 gi|126104976|gb|ABN77654.1| type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221161145|gb|ACM02125.1| Type I secretion membrane fusion protein, HlyD family precursor
           [Rhodobacter sphaeroides KD131]
          Length = 433

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 96/454 (21%), Positives = 188/454 (41%), Gaps = 63/454 (13%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W + K   P  L   TL  ++G  G  TWS+   I  ++   G+I  E N   ++ P  G
Sbjct: 7   WSSRK---PLILGFATLALLVG--GFGTWSVASSISGAIVVQGQIEVEQNRQVVQHPDGG 61

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIE-TTDL--IDLKKVSIKNLRCHIDTEK-------- 114
           +++  +V  GS +  G  LL F+     T+L  ++ +   +   R  ++ E+        
Sbjct: 62  VVESIEVSEGSVVQAGDILLRFDGTTLRTELAIVEGQLFEMLARRARLEAERDDAKGLGV 121

Query: 115 --SALDFLNNKYDVLE------KAFESREE---QLLDFLGKYHSTCSKVFNYGISSVYRS 163
             + L+   N+  V E      + F +R E   Q ++ LGK  +        G+ +   +
Sbjct: 122 FPALLEAEKNRPVVAEQIEGQKRLFAARSESFAQQIEQLGKRKAQIVSQIE-GVDAQISA 180

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L  +L  +     ++ DL +K     + + S Q++   ++   E   ++ +  N + R+ 
Sbjct: 181 LGTQLRLIEEELSDQQDLLSKGLAQASRVLSLQREEARLEG--ELGELTASRANNEGRM- 237

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA--DEMSKLT 281
             + L++         MLR  +   +EA  +  ++     R+LE  +R  A  +++++L 
Sbjct: 238 --TELDI--------EMLRLGSTRREEAITQLRDFGY---RELELAERRSALIEQINRL- 283

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                     + +P++G ++  Q  +     + + P++ I+P  +   I   V P  I  
Sbjct: 284 ---------DLRAPVSGIVLGLQVTTPRAVVRAADPVLYIIPQDRPLVIAGHVPPIHIDE 334

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLA-FS 399
           V  G    + F  ++     +    +  +    +  DN  QT  Y  E++L   + A   
Sbjct: 335 VAVGQPVRLVFSAFSSRTTPELTGHVTVLS-ADALTDNRTQTSYYRAEIMLDPGETAKLE 393

Query: 400 DNNIELRNGFPAEVLF-TAKNTTLAQEIIHPITD 432
           D N  L  G P E    T + + LA  ++ P TD
Sbjct: 394 DRN--LVPGMPVEAFIRTGERSPLAY-LLKPFTD 424


>gi|154245456|ref|YP_001416414.1| HlyD family type I secretion membrane fusion protein [Xanthobacter
           autotrophicus Py2]
 gi|154159541|gb|ABS66757.1| type I secretion membrane fusion protein, HlyD family [Xanthobacter
           autotrophicus Py2]
          Length = 471

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 113/248 (45%), Gaps = 13/248 (5%)

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYDEANLEF 255
           +L  ++ L +K  V+++ ++Q ER   K+ LE  +  N  +   +   I EL  + +   
Sbjct: 227 ELDSLRQLEQKRLVNKSRVSQIER--EKARLEGVVGRNTADTAKVRGSIGELTMQVSQLR 284

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI--VYNQSFSSSNYAQ 313
               ++I + L + ++  A+   K+ +      +  I +P +GT+  +  ++++    A+
Sbjct: 285 QQRAEDIGKQLLEVRQRIAELTEKVRVTRNVLGRIDIRAPRSGTVQNINARAYTVGAVAR 344

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               L++IVP  +   + A+V  + I  +KK     VRFP + D   +    ++ ++  +
Sbjct: 345 AGDTLLEIVPLDEPLVVDAQVPVQDIDRLKKDDAVEVRFPAFHD---RTTPMVMGRLKTV 401

Query: 374 ISQQDNNLQTQEYY---EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              +  +  T + Y    V +  TD+  +     L  G  AEV F     ++   ++ PI
Sbjct: 402 SRDRLVDETTHQPYFLARVAVAETDIPPALKQ-RLVPGMNAEVAFYVGERSVLSYLVRPI 460

Query: 431 TDNWPKIF 438
           TD + + F
Sbjct: 461 TDAFSRAF 468


>gi|326794784|ref|YP_004312604.1| type I secretion membrane fusion protein, HlyD family [Marinomonas
           mediterranea MMB-1]
 gi|326545548|gb|ADZ90768.1| type I secretion membrane fusion protein, HlyD family [Marinomonas
           mediterranea MMB-1]
          Length = 444

 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 108/251 (43%), Gaps = 33/251 (13%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLEL--------RENIHEQKNMLRHIN 245
           +++L + +  FE+ AVS+ +L Q  R V   +  +E         R ++ E +N L+ ++
Sbjct: 200 EEELALTEPAFEQGAVSRVELLQLRRQVNTLRGDMEATELAIPRARSSLKEAENKLKEVD 259

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTREQKTILSPIAGTIVYNQ 304
                     A +  E   DL + +    D++ + ++ LE    +  + SP+ G +   Q
Sbjct: 260 ----------AKFRAEAQEDLTKVKGKL-DQIRESSVSLEDKVSRTQVRSPVKGIVKQIQ 308

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +     +    L++IVP      I AKV P+ I  +K G  A V+   Y        +
Sbjct: 309 INTVGGVIKPGMNLVEIVPLEDSLLIEAKVRPEDIGFIKPGLPAVVKLTAYDFAVFGGLQ 368

Query: 365 AIIEKI--DPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKN 419
           A +E I  D I+ ++ N+     +Y V ++ TD   L   D  + +  G  A V      
Sbjct: 369 ARVETISADTILDEEGNS-----FYAVRVR-TDKSYLGTEDRPLPIIPGMQAGVDVITGK 422

Query: 420 TTLAQEIIHPI 430
            +L   ++ PI
Sbjct: 423 KSLLDYLLKPI 433


>gi|254443671|ref|ZP_05057147.1| type I secretion membrane fusion protein, HlyD family
           [Verrucomicrobiae bacterium DG1235]
 gi|198257979|gb|EDY82287.1| type I secretion membrane fusion protein, HlyD family
           [Verrucomicrobiae bacterium DG1235]
          Length = 495

 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 74/355 (20%), Positives = 142/355 (40%), Gaps = 58/355 (16%)

Query: 20  MTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           + L  I+GII   T W+    ++      G+++  D++  ++S   GI+ +  V  GS +
Sbjct: 125 LLLFVIVGIISAFTYWASTSKVDEITRGQGKVVPTDSLQIVQSLEGGILSQLNVSEGSIV 184

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESRE 135
            +G  LL  ++   T           NL   I   + E + L+ L    +  E   E+R 
Sbjct: 185 NKGDTLLRIDNTAFTAAKSESAAQRDNLMATIARLEAEAADLETL----EFPEHITETRP 240

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + +      + S  S +    I  + +SL++K                            
Sbjct: 241 DLVKSETSLFQSRRSNLAG-SILHLSKSLELK---------------------------- 271

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +K+L +   L E+  VSQ +L           L L+  +++ ++ L  +   Y++  L  
Sbjct: 272 KKELEITIPLAERGIVSQVEL-----------LRLQSIVNDTESELIRVTSDYNKEVLSK 320

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            N  K     ++Q+   F D++          ++  I+SP+ GTI      +     +  
Sbjct: 321 RNEAKAKLEQVQQSIYAFDDKI----------QRTNIVSPVNGTINRVNFNTIGGVIRSG 370

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +P+++IVP+     I A + P  I  ++ G  ATV+   Y        K ++E+I
Sbjct: 371 EPIVEIVPYESDLIIEANILPSDIGFIRPGQEATVKLTAYDFSIYGGLKGVVEQI 425


>gi|332559361|ref|ZP_08413683.1| Type I secretion membrane fusion protein, HlyD family precursor
           [Rhodobacter sphaeroides WS8N]
 gi|332277073|gb|EGJ22388.1| Type I secretion membrane fusion protein, HlyD family precursor
           [Rhodobacter sphaeroides WS8N]
          Length = 433

 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 96/454 (21%), Positives = 188/454 (41%), Gaps = 63/454 (13%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W + K   P  L   TL  ++G  G  TWS+   I  ++   G+I  E N   ++ P  G
Sbjct: 7   WSSRK---PLILGFATLALLVG--GFGTWSVASSISGAIVVQGQIEVEQNRQVVQHPDGG 61

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIE-TTDL--IDLKKVSIKNLRCHIDTEK-------- 114
           +++  +V  GS +  G  LL F+     T+L  ++ +   +   R  ++ E+        
Sbjct: 62  VVESIEVSEGSVVQAGDILLRFDGTTLRTELAIVEGQLFEMLARRARLEAERDDAKGLGV 121

Query: 115 --SALDFLNNKYDVLE------KAFESREE---QLLDFLGKYHSTCSKVFNYGISSVYRS 163
             + L+   N+  V E      + F +R E   Q ++ LGK  +        G+ +   +
Sbjct: 122 FPALLEAEKNRPVVAEQIEGQKRLFTARSESFAQQIEQLGKRKAQIVSQIE-GVDAQISA 180

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L  +L  +     ++ DL +K     + + S Q++   ++   E   ++ +  N + R+ 
Sbjct: 181 LGTQLRLIEEELSDQQDLLSKGLAQASRVLSLQREEARLEG--ELGELTASRANNEGRM- 237

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA--DEMSKLT 281
             + L++         MLR  +   +EA  +  ++     R+LE  +R  A  +++++L 
Sbjct: 238 --TELDI--------EMLRLGSTRREEAITQLRDFGY---RELELAERRSALIEQINRL- 283

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                     + +P++G ++  Q  +     + + P++ I+P  +   I   V P  I  
Sbjct: 284 ---------DLRAPVSGIVLGLQVTTPRAVVRAADPVLYIIPQDRPLVIAGHVPPIHIDE 334

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLA-FS 399
           V  G    + F  ++     +    +  +    +  DN  QT  Y  E++L   + A   
Sbjct: 335 VAVGQPVRLVFSAFSSRTTPELTGHVTVLS-ADALTDNRTQTSYYRAEIMLDPGETAKLE 393

Query: 400 DNNIELRNGFPAEVLF-TAKNTTLAQEIIHPITD 432
           D N  L  G P E    T + + LA  ++ P TD
Sbjct: 394 DRN--LVPGMPVEAFIRTGERSPLAY-LLKPFTD 424


>gi|3646414|emb|CAA07700.1| eprE protein [Pseudomonas tolaasii]
          Length = 437

 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 76/427 (17%), Positives = 161/427 (37%), Gaps = 38/427 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEIL--NEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           LL+++G  G   W+ L P++  +   G ++   +   V+  SP  G++ +  V+ G  + 
Sbjct: 24  LLTVVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTLSP--GVVSRILVKEGEWVK 81

Query: 80  QGTPLLTFEDIETTDLIDLKKV---------SIKNLRCHIDTEKSA---LDFLNNKYDVL 127
           QG PL   +  +T +  D++ +         S+   +   D + +     D   N    L
Sbjct: 82  QGQPLFRLD--QTRNQADVQSLQAQYRMAWASVARWQSERDNQAAVTFPADLSANPDPAL 139

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
               E + +          S+  + F    + +  +++   +++  +   R DL  ++  
Sbjct: 140 ALVLEGQRQ--------LFSSRREAFAREQAGIRANIEGATSQLGGMRRARTDLTAQAQS 191

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           LR         L  ++ L +   + +N L   +R + +   +L +N  E   + + I E 
Sbjct: 192 LR-------DQLANLQPLADNGYIPRNRLLDYQRQLSQVQQDLAQNAGESGRVEQGILES 244

Query: 248 YDEANLEFANYLKEISRDLEQNQ-RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             +       Y KE+   L   Q R+   E  +LT      +   I +P  G  V     
Sbjct: 245 RLKLQQHSEEYQKEVRSQLADAQLRSLTLEQ-QLTSAGFDLQHSEINAPADGIAVNLGVH 303

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +  + L++IVP      +   +    +  V       + F  +   R  +    
Sbjct: 304 TEGAVVRAGETLLEIVPQGTRLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGE 363

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  I     Q  +    Q YY +   +++ A +  + + ++ G PAE+       +L   
Sbjct: 364 VSLIS--ADQMLDEKTGQPYYVLRTSVSEDALAKLHGLVIKPGMPAEMFVRTGERSLLNY 421

Query: 426 IIHPITD 432
           +  P+ D
Sbjct: 422 LFKPLLD 428


>gi|6013391|gb|AAF01329.1| membrane fusion protein [Pseudomonas chlororaphis]
 gi|121483785|gb|ABM54444.1| membrane fusion protein [Pseudomonas chlororaphis]
          Length = 439

 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 77/421 (18%), Positives = 162/421 (38%), Gaps = 25/421 (5%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L+++G      W+ L P++  +   G ++       ++S  SG++ +  V  G  + QG
Sbjct: 25  ILALVGAGSFFVWAALAPLDQGIPVQGTVVVSGKRKAVQSMSSGVVSRILVREGESVKQG 84

Query: 82  TPLLTFEDIETTDLIDLKKV---------SIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
              L F   +T    D++ +         S+   R   D  K  +DF       L  + +
Sbjct: 85  QARL-FRLDQTQVAADVQSLQAQYRMAMASLARWRSERDNLKQ-VDFPAP----LSDSDD 138

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            R   +L+   +  S+  + F+   + +  +++    ++  +   R DL +++  LR  L
Sbjct: 139 PRLALVLEGQRQLFSSRREAFSREQAGIRANIEGATAQLAGMRRARTDLGSQAESLRQQL 198

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           S+       ++ L +   + +N L + +R + +   EL +N  E   + + I E   +  
Sbjct: 199 SN-------LQPLADNGYIPRNRLLEYQRQLSQVQQELAQNTGESGRVEQGILESRLKLQ 251

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                Y KE+   L + Q        +LT      +   I++   G  V     +     
Sbjct: 252 QHSEEYQKEVRIQLAEAQLKTQTLEQQLTSAGFDLQHSEIIATADGIAVNLGVHTEGAVV 311

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +Q + L++IVP      +  ++    +  V       + F  +   R  +    +  I  
Sbjct: 312 RQGETLLEIVPQGTHLEVEGRLPVNLVDKVGTHLPVDILFTVFNQSRTPRVPGEVSLIS- 370

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
              Q  +      YY +   ++D A    N + ++ G PAE+       +L   +  P+ 
Sbjct: 371 -ADQMLDEKTGMPYYVLRSSVSDQAMEKLNGLVIKPGMPAEMFVRTGERSLLNYLFKPLL 429

Query: 432 D 432
           D
Sbjct: 430 D 430


>gi|29421544|gb|AAO73516.1| RsaE [Caulobacter vibrioides]
          Length = 419

 Score = 45.4 bits (106), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 54/344 (15%), Positives = 140/344 (40%), Gaps = 33/344 (9%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           +  +G++ W+   P++ +V ++G +  + N   I+    G++ K  V  G ++  G  L 
Sbjct: 26  LAFVGVLGWAAFAPLDTAVIANGVVTTDANKT-IQHLEGGMLAKILVREGERVRPGRCLF 84

Query: 86  TFEDIETTDLIDLKK---VSIKNLRCHIDTEKS-------ALDFLNNKYD-VLEKAFESR 134
             +  +      + +   V+ + L   +  E+          + L  + D V+ +A    
Sbjct: 85  QLDPTQVNAAAGITRAQYVAFRALEARLVAERDQRPTISFPAELLAQRADPVVARALADE 144

Query: 135 EEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRAL 191
           + Q   F+ +  +   +V  FN                 R  + + +D ++ ++  L+  
Sbjct: 145 QSQ---FVERRQTIQGQVDLFNA---------------QRDQFKSEIDGIDRQAQGLKEQ 186

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L   Q++L  ++ +++K  V +  L   ER     +  + +   ++   ++ + E   + 
Sbjct: 187 LGFIQEELGDLRKIYDKGLVPRPRLLALEREQASLSGAIGKLNADRSKAIQGMGETQLKI 246

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 + +++S  + + +   A+   +  +    + +  I+SP+ G     + F+    
Sbjct: 247 RQIRQQFFEQVSEAIAETRVKLAEVSEREVVAADAQRRVNIVSPVNGVAQALRFFTEGAV 306

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            + ++ L+ I P  +   I A+  P  + ++ +G    VR P +
Sbjct: 307 VRPAEALVDIAPDERSFEIHAQFAPTDVDNIHEGMVTEVRLPSF 350


>gi|319781761|ref|YP_004141237.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317167649|gb|ADV11187.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 449

 Score = 45.4 bits (106), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 81/435 (18%), Positives = 174/435 (40%), Gaps = 62/435 (14%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           G+ G   W+ L P++ +  + G I    +   I+    GII +    NG  +  G  L+ 
Sbjct: 43  GVAG--GWAALAPLDSAAVAPGVIKVAGDRKLIQHLEGGIIAELNAANGDVVKAGKILVR 100

Query: 87  FEDIETTDLIDL-------KKVSIKNLRCHIDTEKSALDF----LNNKYDVLEKAFESRE 135
            +D +    +DL       ++     LR   D  ++ ++F    L N     + A  ++ 
Sbjct: 101 LDDTQAKAQLDLIQNRIATREALAARLRAERDG-RAEIEFDPALLANPATAAKDAVSAQR 159

Query: 136 EQLLDFLGKYHSTCSK--VFNYGISSVYRSLK----MKLTRMRSIYLNRLDLENKSSLLR 189
           +    F  K+H+   +  + +         +K    + +T+ + I     + ++  SLL+
Sbjct: 160 DV---FAAKHHNLADEQEILSQRRHQTEEEIKGLEELIVTKDKQIEAIEGETKDLESLLK 216

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM------LRH 243
             L++ +++L + +         Q    + ER    + +    +   + +M         
Sbjct: 217 KGLTTRERNLLLRR---------QQQEIEGERATNIAAIARARSAMAEIDMQILNLDTVR 267

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +NE  DE +   A        DL Q +R   D      +L +T     +++P+ G ++  
Sbjct: 268 LNESVDELSKVEAELF-----DLRQEERAARD------VLTRT----DVVAPVDGIVMDL 312

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  ++    +    LM IVP  +   + A V P+ ++ +  G  A V FP +A       
Sbjct: 313 KVHTAGGVVKPGDTLMTIVPLGQQLVVEAMVKPEDVETIAPGQPARVSFPAFARYNLPPL 372

Query: 364 KAIIEKI--DPIISQQDNNLQTQEYYE--VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + ++E +  D ++ ++        Y+   V++  ++L   +   +L  G  +E +     
Sbjct: 373 EGVVEIVSADRMVEERSG----APYFAATVVIDKSELGKLEGR-KLLPGMSSETMIRTGA 427

Query: 420 TTLAQEIIHPITDNW 434
            T+   +  PIT N+
Sbjct: 428 RTVLSYLAEPITQNF 442


>gi|300311130|ref|YP_003775222.1| Type I antifreeze protein:HlyD family secretion protein
           [Herbaspirillum seropedicae SmR1]
 gi|300073915|gb|ADJ63314.1| Type I antifreeze protein:HlyD family secretion protein
           [Herbaspirillum seropedicae SmR1]
          Length = 457

 Score = 45.4 bits (106), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 61/332 (18%), Positives = 125/332 (37%), Gaps = 30/332 (9%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WS+  PI++ V  SG I+  ++   I+    GI+    V  G+ + +G  L++  D+   
Sbjct: 58  WSVFAPIDMVVRGSGRIVASEHNQVIQHLEGGIVSAILVREGAAVKKGQTLISISDVRAN 117

Query: 94  DLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             +   +V I  LR  I     E S    L    D LE+   + + +   F  +      
Sbjct: 118 ADLGEGRVKILGLRAKIARLSAEASGASSLQMPDD-LERGDPAVQSEQAAFAARSSKLMQ 176

Query: 151 KVFNYGISSVYRSLKM--KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
           ++      S  R  ++   ++R +S   + L+L              Q+   ++ ++  +
Sbjct: 177 EMSVLREQSAQRQAELGEAISRQKS-QASELEL-------------AQRQYKLIHDMLVR 222

Query: 209 NAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           NA SQ  D+    R+      + +  +     M+  +N    EA  +          D  
Sbjct: 223 NAASQLEDIQAASRV-----QDAQSKLAATNAMIPRLNAAIAEAQAKQGEAASRFRSDAR 277

Query: 268 QNQRTFADEMSKLTILEKTREQKT----ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
                   E+++L    K+R  +     + +P+ G +      +     +   P++++ P
Sbjct: 278 TELTAAETELARLQEEIKSRNDRVSRSEVKAPMDGVVNRVMINTIGGVVRPGDPIIEMTP 337

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
                 I A+++P     +  G  A V+   Y
Sbjct: 338 SDDKLVIEARISPTDRAELVTGARARVKVSAY 369


>gi|13475652|ref|NP_107219.1| rhiziobicin secretion ABC transporter, RspE [Mesorhizobium loti
           MAFF303099]
 gi|14026408|dbj|BAB53005.1| rhiziobicin secretion ABC transporter; RspE [Mesorhizobium loti
           MAFF303099]
          Length = 447

 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 83/437 (18%), Positives = 170/437 (38%), Gaps = 57/437 (13%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           I+G   W  L  I  +V +   ++ E N+ +++    G I     ++G  +  G  +   
Sbjct: 40  IVGGGLWLGLTRIAGAVIAPATVVVESNIKKVQHLTGGTIGGIFAQDGDHVRAGDIVARL 99

Query: 88  EDIETTDLI-----DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
           +D  T   +     DL + +++  R  ++ E+  L  +     + E+  +     L+   
Sbjct: 100 DDTLTRANLQIISEDLDRATVRLAR--LEAERQGLPEMQLPSGLQERMGDPELAALV--- 154

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQK---- 197
                        G  +++ S    LT  ++   +R   LE +   L+A  ++  +    
Sbjct: 155 ------------RGERTLFESRATALTGQKAQLQSRSKQLERQIDGLKAQQAAEDQSVVL 202

Query: 198 ---DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE-------L 247
              DL  ++ LF K  VS+  L+       ++  E              I+E       L
Sbjct: 203 LDGDLGDVQALFTKKLVSKERLSNIRLDATRAHGESGRLAAAVAEAQAKISETELQILQL 262

Query: 248 YDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            D+   E  + L+E      +L + +    DE++K            I +P +GT+  + 
Sbjct: 263 DDQRRSEVTSELRETEAKQTELSERKVVAQDELTK----------TNIRAPQSGTVQESA 312

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        + +M IVP +    + A + P +I  V+ G   ++RFP +        +
Sbjct: 313 IHTIGGVIAPGEVIMMIVPDTDNLVVDALIPPSRIDDVRPGQHVSIRFPAFDAGTTPACQ 372

Query: 365 AIIEKIDP-IISQQDNNLQTQEYYEVILKITDLA--FSDNNIELRNGFPAEVLFTAKNTT 421
             +++I   +I  Q   L    Y+   + + + A   +D  + L+ G PAEV  +    +
Sbjct: 373 GSVKRISADLIKDQQKQL---SYFSARINVENKAACLTDAKV-LKPGMPAEVHISTDERS 428

Query: 422 LAQEIIHPITDNWPKIF 438
           +   ++ P+TD   + F
Sbjct: 429 VWSYLLKPLTDQMSRAF 445


>gi|332708772|ref|ZP_08428743.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
 gi|332352314|gb|EGJ31883.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
          Length = 479

 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 30/218 (13%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L+I G+IG++ WSI+  I I+V+  G ++N   VV+++SP SG ++   +  G Q ++  
Sbjct: 41  LAIFGLIGVL-WSIVGTIPITVTGKGVLINPRRVVQLESPISGQLESLTIRTG-QCVKKD 98

Query: 83  PLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE-KAFESREEQL 138
            +L    I+ +DL   +  ++  +  L+  I    + +  L  +   LE  A  +    L
Sbjct: 99  DILGI--IDPSDLKQQLQQQRDKLAQLKQQI----AKITLLRQQRTQLETTAITAERTSL 152

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              L    +   ++ N G++S+       L++ RS+     D E  + +L       Q+ 
Sbjct: 153 QQRLRDTETLTPQLQNQGLTSI-------LSQHRSLQQQLKDAEELTPIL-------QQR 198

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           L   ++L ++ A+S   + Q E+  Y+ T   R+ I E
Sbjct: 199 LAKQRDLQKQGAISSERILQAEQ-DYRET---RQTISE 232


>gi|320323753|gb|EFW79837.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. glycinea str. B076]
          Length = 445

 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 77/428 (17%), Positives = 158/428 (36%), Gaps = 35/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G      W+ L P++  ++  G ++       ++S   G++ K  V  G  + +G
Sbjct: 27  ILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQSVKEG 86

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLD 140
            PL   +  +        +  +++LR       ++L    ++ D L++  F +  E +  
Sbjct: 87  EPLFRLDQTQV-------EADVQSLRAQYRMAWASLARWQSERDNLDEVHFPA--ELIAA 137

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALL 192
             G+       +   G   ++ S +  L R +S          L    +    S L A  
Sbjct: 138 GQGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQA 197

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S +K L+ ++ L +   +  N L + +  + +    L +N  E   + + I E      
Sbjct: 198 DSLRKQLSNLEPLAQNGFIPGNRLLEFQSQLSQVQQSLAQNAGETGRIEQGIVESRLRLQ 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQS 305
            +   Y KE+       +  +AD   K   LE+       + +   IL+P  G  V    
Sbjct: 258 QQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNLGV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + L++IVP      ++ ++  + I  V       + F  +   R  +   
Sbjct: 311 HTEGAVVRAGETLLEIVPQGTRLEVKGRLPVQFIDKVASHLPVDILFTAFNQSRTPRVSG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     Q  +    Q YY +   + D      N + ++ G PAE+       +L  
Sbjct: 371 EVNLIS--ADQMQDEKTGQPYYVLRTSVGDAVLEKLNGLVIKPGMPAEMFVRTGERSLLN 428

Query: 425 EIIHPITD 432
            +  P+ D
Sbjct: 429 YLFKPLLD 436


>gi|99077968|ref|YP_611227.1| Type I secretion membrane fusion protein, HlyD [Ruegeria sp.
           TM1040]
 gi|99034911|gb|ABF61965.1| HlyD family secretion protein [Ruegeria sp. TM1040]
          Length = 439

 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 92/433 (21%), Positives = 178/433 (41%), Gaps = 61/433 (14%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           G++G   W+    I+ +  + G +  E N   ++    GII+   V+    + QG  L+T
Sbjct: 32  GVLG--GWAAYAQIDSATVAPGIVELEGNRKVVQHLEGGIIQTIHVKEAESVSQGDVLVT 89

Query: 87  FEDIETTD-------------LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            E +E                 I+ + ++ + L   ID  +S     +N    L+   + 
Sbjct: 90  LESVEARSNVERFRNRLEEAMAIEARLLAEQALSEEIDYPES---LTSNPSPALKNVLDL 146

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +   L D L  + S   ++  + I  +    K  L   +  Y  RL L+++   L   L+
Sbjct: 147 QSTILADRLAIFRSE-QEILQFRIEQL-EGQKAGLALQKDAYERRLKLQSE---LVERLT 201

Query: 194 SHQKDLTMMKNLF--EKNAVSQNDLNQQERIVYKSTLELRENIHEQK-NMLRHINELYDE 250
              +   +  N+    K+A+ Q + +  E I  ++ + +   I E + N L+   E  + 
Sbjct: 202 RGAESGVIENNVLTGRKDALIQVEASLGEAISDEAQVGV--AISEARLNRLKLSQEFKER 259

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           AN E    L++I  DL++ +         LT+ +    +  I +P  G +   +  +  +
Sbjct: 260 ANRE----LRDIQTDLKEIR-------ENLTVAQDIYYRTEIRAPSDGVVQDIRVTTEGS 308

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  + LM+IVP      I ++V+P  I +V  G  + VRF          FKA   K+
Sbjct: 309 VIRPGEILMEIVPPDDNLLIASRVSPLDIDNVVPGQESEVRF--------SAFKA---KL 357

Query: 371 DPII------SQQD----NNLQTQEYYEVILKITDLAFSDNNIE-LRNGFPAEVLFTAKN 419
            P++        QD         + YY   +++ +   S+   + L  G PA+V+     
Sbjct: 358 TPVVLGYVESVSQDIITPERSDEEPYYLARVRVPEENMSEEMRQGLTAGMPADVVIVNGE 417

Query: 420 TTLAQEIIHPITD 432
            ++   ++ P+TD
Sbjct: 418 RSVLNYLVSPLTD 430


>gi|293608595|ref|ZP_06690898.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829168|gb|EFF87530.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 398

 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 154/396 (38%), Gaps = 74/396 (18%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLIT---WSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           N+  + P  L R +L+  I  IGL+    W+ +  +E   + +G+++       I+S   
Sbjct: 15  NVSYSEP-PLPRASLVIWIVGIGLVIFFIWAWVFKLEEVSTGTGKVIPSSKEQVIQSLEG 73

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           GI+ K  V+ G  + +G  L   +         E+  L+   + +   LR  ++   + L
Sbjct: 74  GILTKLNVQEGDIVQKGEILAQLDPTRFASNVGESRSLLISAQATAARLRAEVNG--TPL 131

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            F     +++ K  +  +E+                    +++YRS              
Sbjct: 132 VF----PEIVMKEPKLVQEE--------------------TALYRS-------------R 154

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R DLE   + LR  L   Q++L M + L  K A S+ ++           L LR   ++ 
Sbjct: 155 RADLEQTLAGLRQALQLVQQELAMTEPLVAKGAASEVEV-----------LRLRREANDL 203

Query: 238 KNMLRHI-NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +N +    N+ Y +A  E    L + + D E  Q+        L       ++    +P+
Sbjct: 204 QNKMNDAQNQYYVKAREE----LSKANTDSETQQQIVLGRSDSL-------DRAVFRAPV 252

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +      +      Q+  LM IVP  +   I A++ P+ I  ++ G  A V+   Y 
Sbjct: 253 RGVVKEIAVTTHGGVVPQNGKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKITAYD 312

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
                  K  +  I P  + +D   Q Q YY V ++
Sbjct: 313 YSIYGGLKGKVTVISP-DTIRDEVKQDQFYYRVYIR 347


>gi|254446784|ref|ZP_05060259.1| auxiliary transport protein, MFP family, putative [Verrucomicrobiae
           bacterium DG1235]
 gi|198256209|gb|EDY80518.1| auxiliary transport protein, MFP family, putative [Verrucomicrobiae
           bacterium DG1235]
          Length = 424

 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 78/422 (18%), Positives = 168/422 (39%), Gaps = 27/422 (6%)

Query: 17  LKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            +++ +++ +G ++ +I   I + I  +V+S G ++       ++    G + +  V+NG
Sbjct: 11  FEKLGVVACLGFVLAVIVCGIFIRISGAVTSVGYVVQTGENKAVQHAEGGSVAEIFVKNG 70

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G PLL       T   D+    +K  R  ++   + L           KA  + +
Sbjct: 71  DLVEMGDPLLILNAASVTSQYDI----LKKRRFELEVTIARL-----------KALTAGD 115

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E    + G+       +    I   ++   +       + +N L+ E  +   +   SS 
Sbjct: 116 ET-FRYDGEVEYPDIVLTQESIFQAHKDRTLSAQTQLEVRMNGLESELAALQKQTKTSSQ 174

Query: 196 Q-----KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
           Q     + +  ++ LF++  VS+  L    R       EL      +  +    N+   +
Sbjct: 175 QLEFLSESIEEVQELFDEQLVSKARLTALRRDRVAVLSELDALALSEARIRNAYNDARQQ 234

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           +NL       ++ R++E  +    +  S L   +  + +  + +P +G +   +  +   
Sbjct: 235 SNLLKMEEFSDLWREMELAREQMNEVSSSLDATQDRQSRLVVSAPASGRVHELEIRNVEA 294

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                Q +M+IVP S+   + A+V+P  ++ V +G    VRF  +      +    +  I
Sbjct: 295 VVSPGQTIMEIVPVSEGPTVIARVSPMDVEQVYEGQQVRVRFDTFDSKTTPEVLGEVLGI 354

Query: 371 DPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            P   +  +    + YYEVI+ + D  +A     I +  G P   L T +  +L   ++ 
Sbjct: 355 SP--DRITDEASGEIYYEVIVNLPDEEVAKIKTGI-IIPGLPVTALLTTEERSLLDYLLK 411

Query: 429 PI 430
           P+
Sbjct: 412 PL 413


>gi|218529944|ref|YP_002420760.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium chloromethanicum CM4]
 gi|218522247|gb|ACK82832.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium chloromethanicum CM4]
          Length = 448

 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 36/180 (20%), Positives = 72/180 (40%), Gaps = 5/180 (2%)

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E  R+L Q     A+  ++   L+    +  I +P+ G +   ++F+       +  L  
Sbjct: 269 EAQRELSQVDAKAAELSNRRVALDDRLTRTEIRAPVTGILHELKTFTVGGVVTPADILAT 328

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +VP      I  ++ P  I  +  G  A VRF  ++     + K ++  + P  ++   +
Sbjct: 329 VVPEDARLKIEIRIPPTSIDQIGVGRAARVRFTAFSQRTTPELKGVLTYVSPSTTKGPRD 388

Query: 381 LQTQEYY--EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
              + +Y   V LK  ++     +  L  G P EV       T    ++ P+ D + + F
Sbjct: 389 ---EAFYIGHVELKDGEIERLGGSARLIPGMPVEVQVATDERTAMSYLMKPLQDQFSRAF 445


>gi|332703897|ref|ZP_08423985.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio africanus str. Walvis Bay]
 gi|332554046|gb|EGJ51090.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio africanus str. Walvis Bay]
          Length = 431

 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 69/359 (19%), Positives = 149/359 (41%), Gaps = 56/359 (15%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ +  ++I  ++ GEI+    V  ++    GI+++  V  G+ + QG P++  E   + 
Sbjct: 34  WAAVAQLDIVSTAGGEIVPRGKVKAVQHLEGGIVREILVAEGATVEQGQPIVVLESTTSD 93

Query: 94  DLIDLKKVSIKNLR---CHIDTEKSAL--------------DFLNNKYDVLEKAFESREE 136
             ++  +V +  LR     ++ E   L              D +    D+    F +R  
Sbjct: 94  SGVEELQVRMNALRVDMARLEAEVQGLAAPQFDQGLSTLCPDLVAQARDM----FATRMT 149

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK-----SSLLRAL 191
           +L        ++ +   +  I    + +     ++RS+  N L+L N+       LL+  
Sbjct: 150 RL--------ASEAASLDDRIKQRVQDVAESQAKLRSLRQN-LELSNEQVSLSEELLKDN 200

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L++  + L+ +K   E+N ++ + + +++  + ++   L +   E    LRH     +EA
Sbjct: 201 LTTRYEHLSYLK---EQNKLA-SAVEEEQAALSRAESALSQ-AREDARRLRHA--FQEEA 253

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             +  +   E+  +L Q  R  AD +          E+ T+ SP+ GT+      +    
Sbjct: 254 QGKLKDASGELD-ELNQRMRRVADSL----------ERTTLRSPVRGTVKALHVTTVGGV 302

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                 +  IVP      + AK+    I +V +G T  ++    A +  ++F ++  K+
Sbjct: 303 VTPGMAVADIVPVGGQLLVEAKLPVSDIGYVHEGQTTVIKL---ASMDARRFGSLRGKV 358


>gi|304394767|ref|ZP_07376665.1| type I secretion membrane fusion protein, HlyD [Ahrensia sp.
           R2A130]
 gi|303293066|gb|EFL87468.1| type I secretion membrane fusion protein, HlyD [Ahrensia sp.
           R2A130]
          Length = 426

 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 69/329 (20%), Positives = 137/329 (41%), Gaps = 20/329 (6%)

Query: 32  ITWSILLP-IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           + WS     +E+S S  G ++    +  +++   GI++   V+ G ++ +G  L++ + I
Sbjct: 28  VAWSTQAAMVEVS-SGQGRVIPSGRIKLVQNLEGGIVQVIHVDEGERVNKGDLLVSIDPI 86

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF-LGKYHSTC 149
               ++   K +I+ +   +    +    L ++      A ++  +QLLD    +YHS  
Sbjct: 87  AAGAVLAENKAAIREMDAAVQWLTA---LLKDREPQFASADDTGHQQLLDRNRTEYHSVL 143

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S+       +  RS+  +  + R   L   + + + S  +A L    +   MM  L +  
Sbjct: 144 SEQ-----KATLRSIAKQAEQKR---LELSETQGRLSNTKAALVVANEQYGMMAKLRKSR 195

Query: 210 AVSQND-LNQQERIVYKSTLEL-RENIHEQKNMLRH-INELYDEANLEFANYLKEISRDL 266
           A S+ D L  + R   K  LE  R+ +      LR  I+E       + A +   IS  L
Sbjct: 196 AASRADVLTAKSR---KVELEGQRDAMQLAVPRLRAAISEAEARREEQVARFRSRISMRL 252

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            +     A     + +      +  + SP+ G I    + +     + ++ +++IVP   
Sbjct: 253 NEVSAKLASVRQSVAVDVDRVSRAELRSPVNGIIKVLHANTIGQVVKPAENIVEIVPIED 312

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
              +R +V+PK I  +  G  A V+   Y
Sbjct: 313 KLLVRVEVSPKDIAFLHPGQEAVVKLTAY 341


>gi|283782477|ref|YP_003373232.1| efflux transporter, RND family, MFP subunit [Pirellula staleyi DSM
           6068]
 gi|283440930|gb|ADB19372.1| efflux transporter, RND family, MFP subunit [Pirellula staleyi DSM
           6068]
          Length = 630

 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 14/105 (13%)

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------------- 312
           L   + ++  E+ KL  +E+     TIL+P AG +VY   FSS                 
Sbjct: 257 LSAEENSYQLELDKLKDVERQIAGCTILAPAAGQVVYANKFSSGRSGSTAEFVVEAGATV 316

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           ++ QPL+++ P S L +++A +   +I  V+ G   T+R     D
Sbjct: 317 REQQPLIRL-PDSNLMHVKALINEARITLVRPGMPVTIRVDAITD 360


>gi|253996152|ref|YP_003048216.1| HlyD family type I secretion membrane fusion protein [Methylotenera
           mobilis JLW8]
 gi|253982831|gb|ACT47689.1| type I secretion membrane fusion protein, HlyD family
           [Methylotenera mobilis JLW8]
          Length = 470

 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 86/429 (20%), Positives = 179/429 (41%), Gaps = 60/429 (13%)

Query: 19  RMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+ L SI   ++ L+ W+    ++  V   G ++    V  I+S   GI+ +  V  G  
Sbjct: 61  RLLLYSIAAMLLLLVLWAFFAKVDEVVRGDGRVIPSKQVQVIQSLDGGIVSEILVSEGEA 120

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  GTPL+  ++            ++ +LR   + +   L +L  +Y +   A  +    
Sbjct: 121 VAVGTPLIRIDETR----------AVSSLR---ENQSQYLAYLAKQYRLRALAEGTSFNP 167

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR--------LDLENKSSLLR 189
             +   +   T  + +     ++Y S K +LT   +I  ++        L+++ +  +  
Sbjct: 168 PDEVRKQVPETYDQEY-----ALYNSSKDELTSAIAIARDQMVQREKELLEVQFRKEIAE 222

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               S +++L   K L    AVS+ D+ + ER     T + + +I + +  +  I     
Sbjct: 223 KNYESSKRELAANKPLLASGAVSEIDILKLER----ETNKAKGDIDQARAQIGRIESAIG 278

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEM-------SKLTI-LEKTREQKTILSPIAGTI- 300
           EA  + +    E+ ++ +   RT  +++       S++++ L+    Q T+ SP+ G + 
Sbjct: 279 EAKRKVS----EVQQNFQSKVRTELNDITARLNSVSEVSVSLKDKVNQSTLKSPVNGKVS 334

Query: 301 --VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
              YN   +     Q  + ++++VP      +  K+  K I  +     A V+   Y   
Sbjct: 335 RLFYN---TVGGVIQPGKEVLEVVPTDDALILETKIQIKDIAFISLLQPAVVKLTAYDYT 391

Query: 359 REKKFKAIIEKIDP--IISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEV-L 414
                 A++E I P  I+ ++ N      YY  ++++  L  S    + +  G  A+V +
Sbjct: 392 IYGALDAVVENISPDSIVDEKGN-----AYY--VVRVRTLKSSLGKGLPIIPGMVAQVDI 444

Query: 415 FTAKNTTLA 423
            T K T L+
Sbjct: 445 MTGKKTILS 453


>gi|304397521|ref|ZP_07379399.1| type I secretion membrane fusion protein, HlyD family [Pantoea sp.
           aB]
 gi|304355139|gb|EFM19508.1| type I secretion membrane fusion protein, HlyD family [Pantoea sp.
           aB]
          Length = 389

 Score = 45.1 bits (105), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 6/205 (2%)

Query: 189 RALLSSHQKDLT-MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           R L  S +++LT  + NL +   + Q++L   E +V K      E I     + R +++L
Sbjct: 139 RQLYESRRRNLTETISNLQQSLKLVQDELRLTEPLVAKGAAGQVEVIR----LRRQVSDL 194

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             + +    +YL     +  +N      ++      E    + T+ SP+ G +   Q  +
Sbjct: 195 RGKIDEARNDYLVRAHEEQVKNNAELDAQLQVAAGKEDQLTRATLYSPVRGIVKDIQVTT 254

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                +    LM+IVP      I  ++ P+ I  ++ G  ATV+   Y           +
Sbjct: 255 VGGVLEPGGKLMEIVPLEDQLLIETRINPRDIAWIRPGLAATVKVTAYDSSIYGDLHGEV 314

Query: 368 EKIDPIISQQDNNLQTQEYYEVILK 392
           E + P  + QD   + Q YY V ++
Sbjct: 315 ETVSP-DTLQDEVKRDQYYYRVYVR 338


>gi|300716390|ref|YP_003741193.1| type I secretion membrane fusion protein, HlyD family [Erwinia
           billingiae Eb661]
 gi|299062226|emb|CAX59343.1| Type I secretion membrane fusion protein, HlyD family [Erwinia
           billingiae Eb661]
          Length = 411

 Score = 45.1 bits (105), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 90/421 (21%), Positives = 165/421 (39%), Gaps = 83/421 (19%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           I+G I+W+    +E       +I++  +   I+S   GI+    V  G ++ +G  LL  
Sbjct: 46  IVGFISWAHFARVEEITKGEAKIVSRSHEQVIQSLEGGILATMDVHEGQEVKRGEVLLKI 105

Query: 88  EDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDF-LNNKYDVLE---KAFESREE 136
           +         ET + +   K +I  LR     +    D  +     V+E   KA+ +R+ 
Sbjct: 106 DPTRAQASYRETLNKVLGLKGTIARLRAEAYGQPLVFDEQVQKDPAVIEQETKAYNARKA 165

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            L D                IS++ RS  +    MR I +++   +      R LLS   
Sbjct: 166 ALHD---------------AISALQRSFDLS---MREIKMSQPLAD------RGLLS--- 198

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            ++ M++   ++ A   NDL  Q              I E++N  +       EAN +  
Sbjct: 199 -EVEMLR--MQRQA---NDLQSQ--------------IVERRNRYQA------EANADLN 232

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
               E+S+       T  + + +  ++E+T    TI +P+ GT+   +  +     Q  +
Sbjct: 233 KLELELSQ-------TSENLIGRADVMERT----TINAPVNGTVKNIRVNTIGGVIQPGE 281

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +M+IVP      + AK+ P  +  +  G  AT++   Y        K  +E I P   +
Sbjct: 282 HIMEIVPSEDQLLVEAKIRPSDVAFLHPGLPATIKITAYDYAIYGGLKGKVELISPDTIK 341

Query: 377 QDNNLQTQE----YYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
            D           YY V++ +TD   L   +  + +  G  A V       T+ + ++ P
Sbjct: 342 DDAKTAAGRPDDTYYRVMV-LTDSSTLNVGNKQLPIIPGMVASVEIRTGEKTILEYLLKP 400

Query: 430 I 430
           +
Sbjct: 401 V 401


>gi|58697519|ref|ZP_00372776.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58536014|gb|EAL59706.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Drosophila simulans]
          Length = 372

 Score = 45.1 bits (105), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 80/210 (38%), Gaps = 30/210 (14%)

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N+  + AN E    LKE+S        + AD   +L + E +  +  I SP  G +   +
Sbjct: 174 NDSQERANAE----LKEVST-------SIADLKERLMVAEDSLARTIIKSPQDGIVTDIR 222

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV----KK-----------GYTAT 349
             +     Q   P+M +VP      I AK+  + I+ V    KK           G    
Sbjct: 223 YHTEGGVIQSGVPIMSVVPSDDDLIIDAKIQTRNIEEVLSAQKKDSNIVSIDGLEGLKVK 282

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNG 408
           VR   Y+  R      I+  I P      ++ +   YY V + I     +   N+ L  G
Sbjct: 283 VRLSAYSARRLSLISGIVSHISP---DALDDPRLGRYYSVRVVIPKSELAQFKNVYLYPG 339

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            PAEV    ++ TL   +  PI     + F
Sbjct: 340 MPAEVYIVTQSRTLLSFLFTPIIATVDRSF 369


>gi|269962776|ref|ZP_06177117.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832466|gb|EEZ86584.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 446

 Score = 45.1 bits (105), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 13/152 (8%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I++PI+G +V  Q F+        + L+++VP      + A+V+P+ I  +  G  A V
Sbjct: 301 AIVAPISGRVVNMQVFTEKGVIGSGETLLELVPQDDKLLVEARVSPQDIDLIAPGQHAQV 360

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDNNI---ELR 406
           R          +  A ++     IS    + Q Q ++Y     +  +A +  ++    L 
Sbjct: 361 RLTAL----NARTLAPLDGTVLTISADKLSEQNQDDFY-----LARIALAQEDVAKHRLT 411

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           +G  AEVL  ++  T    ++ P+T++  + F
Sbjct: 412 SGMNAEVLILSEPRTPLSYLVKPLTESMNRAF 443


>gi|288573723|ref|ZP_06392080.1| conserved hypothetical protein [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569464|gb|EFC91021.1| conserved hypothetical protein [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 349

 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 38/194 (19%)

Query: 172 RSIYLNRLDLENKSSLLRAL------LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           R+I      L  + SL ++L      L   +  L  ++ LFE+ A ++ +LN+    V +
Sbjct: 118 RAILAQVPQLAQEGSLKKSLALAGKVLDGERDVLRQVQWLFERGAATRAELNEARGKVVR 177

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +          + +++R       +A+LE A+     + D+ QN    A   ++L  +E+
Sbjct: 178 A----------EGDVIRA------QADLEVASA----TVDIPQNAVRLAQIEAELGAMEE 217

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL-----TYIRAKVTPKQIQ 340
           ++ + TILSPI G ++         YA++ Q + +  P + L       + A V P+ + 
Sbjct: 218 SQGELTILSPIPGVVL-------DLYAEEGQTVAQGAPVATLGDPDSVSVVAFVDPRYLS 270

Query: 341 HVKKGYTATVRFPH 354
            +     A VRFP 
Sbjct: 271 MIDLESPARVRFPG 284


>gi|284052494|ref|ZP_06382704.1| chromosome segregation ATPase-like protein [Arthrospira platensis
           str. Paraca]
 gi|291568774|dbj|BAI91046.1| HlyD family secretion protein [Arthrospira platensis NIES-39]
          Length = 625

 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 20/112 (17%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H F+W             + L+S   +I    W+    IE +V + G++       EI++
Sbjct: 21  HLFLWM------------IMLVSTTSVI----WAYFANIEQTVPAMGQLALTSGAREIQA 64

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
           P +G + +  VENG ++ +  P+LTF    T    DL+  ++++LR  ++ E
Sbjct: 65  PTTGAVVRLHVENGDRVERNQPILTFSP--TNPSADLR--AVESLRAALEKE 112


>gi|160334192|gb|ABX24515.1| RTX toxin ABC transporter [Listonella anguillarum]
          Length = 450

 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 161/366 (43%), Gaps = 46/366 (12%)

Query: 9   LKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L+++ P+   R+T +++ +G++  + W+    ++I  +++G +L       I+S     +
Sbjct: 28  LQQSPPSPFARITAITLSVGLLLTLLWTYWGKLDIQATANGRLLVPGRSQVIQSYEQSRV 87

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  + +G ++ +G PLLT + +  +         I+ LR  I  +    +FL  KY  L
Sbjct: 88  AQIHIADGERVEKGMPLLTLDTLGVSQ-------DIERLRHQIRYQTH--EFL--KYQAL 136

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNY------GISSVYRSLKMKLTRMRSIYLNRLDL 181
               +  +  L  +L    S   +V +         +SV  +L+ ++         +++L
Sbjct: 137 RGKADLAQHPL--YLALAPSAQQEVIDSFDTEKNEFTSVLENLRAEM---------QVNL 185

Query: 182 ENKSSL------LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
            ++SSL      L+ L+S+  + L   K L ++  + Q    +QE+ + +S   L +   
Sbjct: 186 ASQSSLEVDIRGLKQLVSNITQRLDAQKKLKQQRLIGQVQYLEQEKELLESERALAQQTS 245

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTREQ---KT 291
           +Q  + +    L  E  L+     K  +R+ +   +    ++S L   L+K RE    + 
Sbjct: 246 QQHVLQKQYLNL--EERLKALRAQK--AREWQDKSQQAHLQLSALQHELDKVREHEGLQV 301

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + SP+ GT+      +     Q +Q LM IVP   +     K+  K I  +  G   T++
Sbjct: 302 VRSPVTGTVQQLSVHTLGAVLQPAQNLMIIVPDDSVQVAEVKILNKDIGFIYAGQPVTLK 361

Query: 352 ---FPH 354
              FP+
Sbjct: 362 IDAFPY 367


>gi|163851092|ref|YP_001639135.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium extorquens PA1]
 gi|163662697|gb|ABY30064.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens PA1]
          Length = 448

 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/180 (20%), Positives = 72/180 (40%), Gaps = 5/180 (2%)

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E  R+L Q     A+  ++   L+    +  I +P+ G +   ++F+       +  L  
Sbjct: 269 EAQRELSQVDAKAAELSNRRVALDDRLTRTEIRAPVTGILHELKTFTVGGVVTPADILAT 328

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +VP      I  ++ P  I  +  G  A VRF  ++     + K ++  + P  ++   +
Sbjct: 329 VVPEDARLKIEIRIPPTSIDQIGVGRAARVRFTAFSQRTTPELKGVLTYVSPSTTKGPRD 388

Query: 381 LQTQEYY--EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
              + +Y   V LK  ++     +  L  G P EV       T    ++ P+ D + + F
Sbjct: 389 ---EAFYIGHVELKDGEIERLGGSARLIPGMPVEVQVATDERTAMSYLMKPLQDQFSRAF 445


>gi|186683429|ref|YP_001866625.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186465881|gb|ACC81682.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
          Length = 486

 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 121/269 (44%), Gaps = 17/269 (6%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S   +  L  + I+ L+ WSI   I I+V   G ++    VV ++S FSG +   +++
Sbjct: 37  PKSWIPLATLGSLSIVALV-WSIFGRIPITVDGVGVLVYPSTVVPLQSRFSGQLVALKIK 95

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +G  L T + ++  + + L +   K L+   + E   L       ++  K  + 
Sbjct: 96  QGDVVKKGDILATLDQVDLREQLQLVRGKFKQLQMQ-NHEVKLLQIKRRDGEI--KTIQE 152

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS----IYLNRLDLENKSSLLR 189
           + E L   L    +    + + G+ S+    + +  R+++    I   ++ L+N+  L  
Sbjct: 153 QRETLDQRLQMMQNLTPLLKDKGLISIQVERQNQTQRLQTLQGLIPTYKMRLKNRQMLFE 212

Query: 190 -------ALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERI-VYKSTLELRENIHEQKNM 240
                   LL S Q+ L  M ++ E K+ + Q D+ + E +  Y S L   +NI  Q   
Sbjct: 213 EGAIPDDTLLQSRQEYLDNMASIEEVKSQLKQLDVKEAEALQQYLSNLNEIKNIKAQLQS 272

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQN 269
           L+      D+ NLE +   K+  +D++++
Sbjct: 273 LKSQKTSSDQQNLESSTSRKKEIQDVQRD 301


>gi|156978282|ref|YP_001449188.1| hypothetical protein VIBHAR_07089 [Vibrio harveyi ATCC BAA-1116]
 gi|156529876|gb|ABU74961.1| hypothetical protein VIBHAR_07089 [Vibrio harveyi ATCC BAA-1116]
          Length = 486

 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 88/457 (19%), Positives = 176/457 (38%), Gaps = 68/457 (14%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  +  +  +  I W+    I+      G+++    +  +++   G++KK  
Sbjct: 50  NTPNSARLMLWVMALFFVAAIGWASWAEIDKVTVGQGKVIPSSQIQVVQNLEGGLVKKIL 109

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G ++ +   LL  +D         ++  + NL   +    ++++ +    D  +  +
Sbjct: 110 VKEGQKVQKDQQLLLIDDTRFRSDFREREQQVANLTASVLHLSASINSVEVNRDFDDSNW 169

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYG---ISSVYRSLKMKLT-RMRSIYLNRLD------- 180
           E                 + V +YG      +    + +LT R ++ Y   LD       
Sbjct: 170 EK----------------NVVIDYGKLTFPPILEENRPRLTQRQKAEYREDLDNLRSQIS 213

Query: 181 ---------------LENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-------QNDLNQ 218
                          ++ + S LR      +K+L + K L ++  V        Q  +N 
Sbjct: 214 VIDQQVKQKQQDLVEIQARVSNLRQSYRYAKKELDITKPLADEGVVPRIELLKLQRQVND 273

Query: 219 QERIVYKSTLE---LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
             R +  S L+   ++  I E  +ML  I     +  L+F +  +E    L   Q   + 
Sbjct: 274 TRREMTSSELKIPVIKSGIRE--SMLNRI-----DVALKFRSEQQE---KLNSTQDQLSA 323

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            +     LE    +  ++SP+ GTI      +     Q    +++IVP      + AK+ 
Sbjct: 324 LVESAVGLEDRVNRTVVVSPVTGTIKTLNVNTVGGVIQPGMDIVEIVPTEDTLLVEAKIA 383

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           PK I  ++    A V+F  Y   +    +  +E I    +Q +   +   +Y V ++   
Sbjct: 384 PKDIAFLRPDLHAIVKFTAYDFTKYGGLEGELEHISADTTQDE---EGNSFYIVRIRTEK 440

Query: 396 LAFS-DNNIELRNGFPAEV-LFTAKNTTLAQEIIHPI 430
            +F  D ++ +  G  A V + T K T L + ++ PI
Sbjct: 441 TSFGQDADLPIIPGMTASVDIITGKRTVL-EYLLKPI 476


>gi|149188920|ref|ZP_01867210.1| Type I secretion membrane fusion protein, HlyD [Vibrio shilonii
           AK1]
 gi|148837340|gb|EDL54287.1| Type I secretion membrane fusion protein, HlyD [Vibrio shilonii
           AK1]
          Length = 434

 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 78/435 (17%), Positives = 173/435 (39%), Gaps = 50/435 (11%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           L+ ++  IG+  WS   P+  +  + G+++ E    +++    G+++   V+ G ++ +G
Sbjct: 25  LVLLVCFIGIGYWSYSAPLSSASLAPGKLVTELENQKVQHHTGGVVETLLVKEGQRVEKG 84

Query: 82  TPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKS--ALDFLNNKYDVLEKAFESREE 136
             LL   D       + ++ K+  ++     ID E S  AL++ N             EE
Sbjct: 85  DLLLVLSDPLLVSQLEQLNQKRFIVQARLARIDAELSGEALNWGN-------------EE 131

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            L     +     + + N       ++  +   +M S+       EN     +A LSS +
Sbjct: 132 NLTPIQSQIRRDQASLLN-------QNRLIHKEQMMSLRQQMAQSENDRDSYKAWLSSDE 184

Query: 197 KDLTMMKN-------LFEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             LT++         L EK  VS+    +L ++   +     E R  I    N +  +  
Sbjct: 185 HSLTLLNEEIEANSALLEKGYVSKVAFLELKREYSSLVAKIAEHRTRIKRTNNKVAELES 244

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             D   ++F    +E  ++L   ++    ++     L    E   + +P+ G ++     
Sbjct: 245 QMDALKIDFMRTAQEKKQELVSEEQAILKQLKASNTLNDRIE---VRAPVGGDVINLVIH 301

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +  +++IVP++        + PK I+ V +G +A +R   Y+    ++  A+
Sbjct: 302 TQGGVVAPTSTILEIVPNNTRVVASVNIQPKDIESVYEGLSANIRLTSYSF---RQVPAV 358

Query: 367 IEKI-----DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             ++     D I+ ++        +Y+  + +      D  ++L+ G P E     +  T
Sbjct: 359 TGELIHLSADSIVDERLGG----HFYQGKIALDATELLDLGLDLKPGMPVEAQIVLEERT 414

Query: 422 LAQEIIHPITDNWPK 436
           +   ++ P+  +  K
Sbjct: 415 VLDYLLSPLIQSMEK 429


>gi|70731437|ref|YP_261178.1| RND family efflux transporter MFP subunit [Pseudomonas fluorescens
           Pf-5]
 gi|68345736|gb|AAY93342.1| efflux transporter, RND family, MFP subunit [Pseudomonas
           fluorescens Pf-5]
          Length = 390

 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 69/164 (42%), Gaps = 18/164 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLP--------------IEISVSSSGEILNED 54
           +KR  P     +  L +I ++ +  W  +                IE SV++ G  L   
Sbjct: 1   MKRPRPTRRALLAALCVIPVVAIAAWKFIPAGRDQFTTVQVSRGDIESSVTALG-TLQPR 59

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V++ +  SG I+K  VE+G Q+ +G  L+  +       +D  + SI+NL+  +  + 
Sbjct: 60  RYVDVGAQASGQIRKIHVESGDQVKEGQLLVEIDPSTQQAKLDASRFSIENLQAQLQEQY 119

Query: 115 SALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +       KY     L+    +REE +     +  +T +++  Y
Sbjct: 120 AQNQLARQKYQRQQNLKAGGATREEDVQTAQAELKATQARIDMY 163


>gi|254560785|ref|YP_003067880.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens DM4]
 gi|254268063|emb|CAX23935.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens DM4]
          Length = 448

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 36/180 (20%), Positives = 72/180 (40%), Gaps = 5/180 (2%)

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E  R+L Q     A+  ++   L+    +  I +P+ G +   ++F+       +  L  
Sbjct: 269 EAQRELSQVDAKAAELSNRRVALDDRLTRTEIRAPVTGILHELKTFTVGGVVTPADILAT 328

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +VP      I  ++ P  I  +  G  A VRF  ++     + K ++  + P  ++   +
Sbjct: 329 VVPEDARLKIEIRIPPTSIDQIGVGRAARVRFTAFSQRTTPELKGVLTYVSPSTTKGPRD 388

Query: 381 LQTQEYY--EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
              + +Y   V LK  ++     +  L  G P EV       T    ++ P+ D + + F
Sbjct: 389 ---EAFYIGHVELKDGEIERLGGSARLIPGMPVEVQVATDERTAMSYLMKPLQDQFSRAF 445


>gi|262275321|ref|ZP_06053131.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Grimontia hollisae CIP 101886]
 gi|262220566|gb|EEY71881.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Grimontia hollisae CIP 101886]
          Length = 466

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 76/390 (19%), Positives = 158/390 (40%), Gaps = 46/390 (11%)

Query: 22  LLSIIGIIGLIT--WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           LL +I +  ++T  W+    ++      G+++    +  +++   G+IKK  V  G  + 
Sbjct: 38  LLWVIALFIIVTAVWAAFAELDKVTVGQGKVIPSSQLQVVQNLEGGLIKKLLVHEGDTVE 97

Query: 80  QGTPLLTFEDI--------ETTDLIDLKKVSIK----------NLRCHIDTEKSALDFLN 121
           +G  LL  +D            +L  L+  ++K          N    ++  + A+    
Sbjct: 98  EGQQLLLIDDTMFRSDFRERVQELTSLQGDAVKLQSLVESVVVNPETGVENWQEAVTIQR 157

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           N+  V    F+     ++       +     +   ++++   L +   ++R      +++
Sbjct: 158 NEL-VFTPEFQEEHRAVV-------ARQRAEYRDKLNNLQNQLSVTAQQIRQKEQELIEV 209

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE--------N 233
           E +   LR       ++ ++ K L ++  V Q DL + +R V  +  EL           
Sbjct: 210 EARVQNLRQSYRFAHEEYSITKPLADEGVVPQIDLLKLQRQVNDTQRELSSAELSLPSIT 269

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              Q+ + +HI+       L+F    +E   D+E   +  A   +++T+ ++  E+  ++
Sbjct: 270 SSLQEAVFKHID-----VALKFRAEQQERLSDVED--KLLAMTETRVTLADRV-ERTVVV 321

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ GTI      +     Q    L++IVP      I AK+ P+ I  ++ G  A V+F 
Sbjct: 322 SPVNGTIKKLHVNTVGGVIQPGMDLVEIVPSEDNLLIEAKIAPQDIAFLRPGLEAIVKFS 381

Query: 354 HYADIREKKFKAIIEKI--DPIISQQDNNL 381
            Y          I+E I  D I  ++ N+ 
Sbjct: 382 AYDFTVYGGLTGILETISADTIQDEEGNSF 411


>gi|237808023|ref|YP_002892463.1| type I secretion membrane fusion protein, HlyD family [Tolumonas
           auensis DSM 9187]
 gi|237500284|gb|ACQ92877.1| type I secretion membrane fusion protein, HlyD family [Tolumonas
           auensis DSM 9187]
          Length = 461

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 114/256 (44%), Gaps = 42/256 (16%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +S +N+    +  ++ ++ LNN+  ++ +  E +E ++L+             N  I ++
Sbjct: 162 ISPENVARQKNALQANINNLNNQLVIMGQQIEQKENEILEI------------NSKIRTL 209

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            RS+ +     R + +NR        L++  + S    L M + L +     Q +L    
Sbjct: 210 GRSVGLA---GREVAINR-------PLVKEGIVSQIDLLKMQRQLNDM----QGELENAR 255

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            ++ K    LRE+I ++K++            L+F     +  +++E+ Q   + ++++ 
Sbjct: 256 LLLPKQNSLLRESILKRKDV-----------ALQFR---VDAQKEMEEKQSRLS-QLNEG 300

Query: 281 TILEKTREQKT-ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
            I  K R  +T + SP+ GTI   +  +     Q    +++IVP      I AKV PK I
Sbjct: 301 QIGLKDRVSRTSVTSPVKGTIKTLKVNTVGGVVQPGMDIVEIVPTEDTLLIEAKVLPKDI 360

Query: 340 QHVKKGYTATVRFPHY 355
             ++ G  A V+F  Y
Sbjct: 361 AFLRPGLKAMVKFTAY 376


>gi|312885253|ref|ZP_07744931.1| RTX toxin transporter [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367112|gb|EFP94686.1| RTX toxin transporter [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 453

 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 79/382 (20%), Positives = 164/382 (42%), Gaps = 43/382 (11%)

Query: 2   HHFMWKNLKRNH--PASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVE 58
           + F+  +L  +H  P+   R+T LS+ IG+I  + W+    +++  +++G ++       
Sbjct: 22  YDFLPSHLSLSHQPPSPFARLTALSLSIGVIVTLLWAYFGKLDVQATATGRLIVSGRSQV 81

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTF------EDIE---------TTDLIDLKKVSI 103
           I++     + +  V +G Q+    PLLT       +D+E         T +LI  + + +
Sbjct: 82  IQAYEQSRVMQIHVRDGQQVKMDDPLLTVDILGVSQDLERLNSEVNFQTQELILYRSLLL 141

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                 I+ ++  L       D L +++    ++ L  L    S      N+   S ++S
Sbjct: 142 GQ---DIENDEQFLSISVIHRDQLIESYHIEHQEFLTTLADIQSEMD--VNHTSQSAHQS 196

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
               L ++R+     L L+ + +L +A   S  + L   K L E +      L QQ    
Sbjct: 197 DIEALDQLRNNI--SLRLQARKALNQARAISRVEYLEQEKELLETD----RQLAQQ---- 246

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            K+ L++ ++ H    + + +N    +   E+ +  ++ S  L+  ++       +L+  
Sbjct: 247 -KAQLKVLQSEHH--GLTQRMNSFKAQRKGEWLDKKRQASLTLKALKQ-------QLSTA 296

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           ++ +E + I SP+ GT+     F+     Q +Q LM IVP + +     K+  K +  V 
Sbjct: 297 QERQELEIIRSPVNGTVQQLNIFTLGAVLQPAQSLMIIVPENTVQQAEVKILNKDVGFVY 356

Query: 344 KGYTATVRFPHYADIREKKFKA 365
            G   T++   ++  R    +A
Sbjct: 357 SGQKVTLKVDAFSYTRYGTIEA 378


>gi|144898254|emb|CAM75118.1| Type I secretion membrane fusion protein, HlyD [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 462

 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 93/456 (20%), Positives = 182/456 (39%), Gaps = 65/456 (14%)

Query: 2   HHFMWKNLKRNHPASLKRMTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      L+ +  A L R+T+ L+       + WS L  ++    + GEIL   +V  ++
Sbjct: 34  HLAQAVQLEESGTAPLIRLTIYLACAACAVFLVWSALTTVDEVAVAEGEILPLGSVKTVQ 93

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
               GI+ +  V+ G  +  G P++     +   L +L++   + +   + +E+      
Sbjct: 94  HLEGGIVDEILVKEGELVEVGQPIIKLSPAQA--LAELEQTRAREMTLLLKSERL----- 146

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                   +AF         F G  + T  +       S++++        RSI L+++D
Sbjct: 147 --------RAFVEGRAPDFSFAGPQYRTLVQDNQ----SIFQAQSQARDTARSIILSQID 194

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              K S L+ + S H       K+L E+ A    ++  ++ +V K  +    ++  ++ +
Sbjct: 195 --QKRSDLKLMESQH-------KSLREQVAALAEEMKIRDELVAKGLVTRITHLDTRREL 245

Query: 241 LRHINEL---------YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            R   EL           +A  E  N L +    L   Q+   DEM  ++I E  + Q+T
Sbjct: 246 ARAEGELTRILGQTVTARQAVSEMENRLIDSQSAL---QKQNMDEMG-VSIAELAQVQET 301

Query: 292 IL------------SPIAGTIVYNQSFSSSNYAQQSQP---LMKIVPHSKLTYIRAKVTP 336
           I             SP  G   Y +  +  N     QP   + +IVP ++   + AKV P
Sbjct: 302 ISRLEDRVTRLIIESPSHG---YIKGLTVKNQGAVIQPGGLVSEIVPVNRELRVEAKVLP 358

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY--EVILKIT 394
           + + H+  G    ++   Y   R   + +I+ K++ + +    N + + ++  +V L+  
Sbjct: 359 RDVGHLHVGQKVRIKVTTYDFAR---YGSIMGKLEKLSASTFLNEKGEPFFKAQVSLEQN 415

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +     N  +  G          + TL Q ++ PI
Sbjct: 416 YVGSDPGNFVVTPGMTVSAEIITGDKTLFQYMLKPI 451


>gi|242279542|ref|YP_002991671.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio salexigens DSM 2638]
 gi|242122436|gb|ACS80132.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio salexigens DSM 2638]
          Length = 471

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 66/333 (19%), Positives = 146/333 (43%), Gaps = 23/333 (6%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W+    I++  ++SG+I+       I+    G++++  V+ G  + +G  L++ +   
Sbjct: 69  VLWATFSRIDVVATASGKIIPSGKAKIIQPAEIGVVQQILVKEGQSVKKGDLLISLDP-- 126

Query: 92  TTDLIDLKKVSIKNLRCHIDT-EKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTC 149
           T +  D+ +   + +R + D    SAL        V +K  F    +  L  L ++    
Sbjct: 127 TINEADITEFENQLIRAYCDNILYSALSRWKVGTSVDKKLVFTEGTDSNLKLLYQHR--- 183

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
              F Y   ++   L      +    +++ +L+++     A+L    K    M+ L+E++
Sbjct: 184 ---FEYEAMAINDKLSGINGEIEKDKIHQQNLKHQIKKKFAVLEIITKRTEAMRKLYEQD 240

Query: 210 AVSQND--LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI---SR 264
           + S++D    +Q+R+  +   E  +   E++  L  I +L  +     + + ++      
Sbjct: 241 SASEHDWLFQEQKRVAAEQDYESAK--QEEQECLASIEKLERDKKQVISEFRRDTLHKKS 298

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           D E    T    ++K    ++ R Q+ + +P+ G +      +     +++QPLM IVP 
Sbjct: 299 DAENMIETLQQRLAKAQ--QRNRLQQ-LTAPVDGEVQQLSVHTIGGVVKEAQPLMVIVPE 355

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
             +  + A +  + I  VK+G  A V+   FP+
Sbjct: 356 QSVLEVEASILNRDIGFVKEGQLAEVKLEAFPY 388


>gi|325266999|ref|ZP_08133669.1| macrolide-specific efflux protein MacA [Kingella denitrificans ATCC
           33394]
 gi|324981499|gb|EGC17141.1| macrolide-specific efflux protein MacA [Kingella denitrificans ATCC
           33394]
          Length = 420

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 11/109 (10%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V++ +  SG IKK  V+ G ++  G  +   +++   + ++ K
Sbjct: 72  ISQTVSATGEIA-ATNLVDVGAQVSGQIKKMHVQIGDEVKAGDLIAEIDNVTQVNEVNTK 130

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYD----------VLEKAFESREEQL 138
           K  ++  R  + + + AL     KYD          V ++ FE+ E+ L
Sbjct: 131 KAQLETYRAQLASAQVALKIAQRKYDRYKTLANADAVSKEEFEATEDSL 179


>gi|150376846|ref|YP_001313442.1| HlyD family type I secretion membrane fusion protein [Sinorhizobium
           medicae WSM419]
 gi|150031393|gb|ABR63509.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium medicae WSM419]
          Length = 473

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 5/149 (3%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P AG +   Q  +  +     QPL+ IVP  +   +   V+ + I  +  G +  +R
Sbjct: 325 IRAPQAGIVANIQLRTPGSAVTPGQPLLDIVPEDEPLLVEMHVSTRDIDSITIGSSTQIR 384

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDN-NIELRNGF 409
              Y    ++    +  K+  I + Q  + ++   Y+    +I   + + N +I L  G 
Sbjct: 385 LTAY---NQRSHLPMDGKVTYIAADQSMDEKSNVAYFVARAEIAPESLAANPDIRLYPGM 441

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           PAEVL   K  +    ++ P++D++ + F
Sbjct: 442 PAEVLIVHKARSAIDYLVSPVSDSFNRAF 470


>gi|4689001|emb|CAB41456.1| membrane fusion protein [Sinorhizobium meliloti]
          Length = 473

 Score = 44.7 bits (104), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 5/149 (3%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P AG +   Q  +  +     QPL+ IVP  +   +   V+ + I  +  G +  +R
Sbjct: 325 IRAPQAGIVANIQLRTPGSAVTPGQPLLDIVPEDEPLLVEMHVSTRDIDSITIGSSTQIR 384

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDN-NIELRNGF 409
              Y    ++    +  K+  I + Q  + ++   Y+    +I   + + N +I L  G 
Sbjct: 385 LTAY---NQRSHLPMDGKVTYIAADQSMDEKSNVAYFVARAEIAPESLAANPDIRLYPGM 441

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           PAEVL   K  +    ++ P++D++ + F
Sbjct: 442 PAEVLIVHKARSAIDYLVSPVSDSFNRAF 470


>gi|332294946|ref|YP_004436869.1| type I secretion membrane fusion protein, HlyD family
           [Thermodesulfobium narugense DSM 14796]
 gi|332178049|gb|AEE13738.1| type I secretion membrane fusion protein, HlyD family
           [Thermodesulfobium narugense DSM 14796]
          Length = 432

 Score = 44.7 bits (104), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 142/357 (39%), Gaps = 36/357 (10%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-IETTDLIDL 98
           +++ VS+ G+++ + +V  ++S  +G+++K  V+ G  + +G  L+  +  IE  D+   
Sbjct: 45  VDVVVSAKGKVIPDGDVKVLQSFETGVVRKILVKEGDYVKKGQVLVEIDPTIEAADI--- 101

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +   KN      +EK     L  K       FE  E      L +      K       
Sbjct: 102 -QGKEKNYNYLNLSEKRVEALLTGK------PFEVSENDPQSLLQRELYRSQK------Q 148

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ----- 213
           +   SLK K  +M       L L+++   L  LLS   ++   +K L E  AV++     
Sbjct: 149 AYESSLKQKEKQMEETSSAMLSLKDEVKSLERLLSISSEEEKRLKALAEAGAVAEARYRD 208

Query: 214 ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                LN ++ I  KS+      I E    L  + +  +     FA  L E +    Q +
Sbjct: 209 KVKERLNLEKEIGVKSS-----QIEESAIRLEELRQEIEAIRSGFAEKLLEEAGSGAQQE 263

Query: 271 RTFADEMSKLTILEKTREQKTIL-SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                E++      K +E K +L SP+ G +      +S       QP++ IVP      
Sbjct: 264 NLLKSEITTA----KFKESKRLLTSPVDGYVHLIAIKTSGGVVTPGQPIISIVPEDTPLV 319

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
           ++A V  K I  VK+     ++   Y   +    K  +  + P  S +D  L+   Y
Sbjct: 320 VKAMVLNKDIGFVKEEQKVVLKIDTYDFQKYGTIKGFVSVVSP-DSIEDKELKVDGY 375


>gi|254197724|ref|ZP_04904146.1| HlyD family secretion protein [Burkholderia pseudomallei S13]
 gi|169654465|gb|EDS87158.1| HlyD family secretion protein [Burkholderia pseudomallei S13]
          Length = 471

 Score = 44.7 bits (104), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 83/417 (19%), Positives = 161/417 (38%), Gaps = 40/417 (9%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +I L+ W+    I+I  +  G+++    V ++ +   GI+++  V  G  + +G PL+  
Sbjct: 70  LIVLVLWATFFKIDIIAAGQGKVIPSTTVQQLSTLEGGIVRELLVREGQIVKKGQPLVRL 129

Query: 88  EDIETTDLIDLKKV-------SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           + +     +  +         SI  L+   D + + L     K +++     S EE +  
Sbjct: 130 DPVVAQGAVTEQAATREGLMASIARLQAEADGKATPLYPAGLKPEIV-----SEEEHV-- 182

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDL 199
                 +  ++  N  I  + +    K       Y  R+    N   LL          +
Sbjct: 183 -----RAQRAEALNSTIEVLQQQRAAKQAEAAD-YRGRIPQYVNNQHLL-------DDQI 229

Query: 200 TMMKNLFEKNAVSQNDLN--QQERI-VYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             M  L    +V+ N++   Q+ER  +    +  RE   +    +   +   +E    F 
Sbjct: 230 QRMLPLVGVGSVAPNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKIEEKISTFR 289

Query: 257 NYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           +  +E ++R   Q Q        K  IL++T     I SP+ G +      +    A   
Sbjct: 290 SEAREELARKQVQLQALEGTLSGKQDILDRT----LIRSPVNGIVKTLYITTIGGVASPG 345

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + ++ IVP +    I A++ P+ I +++ G  A VR   +         A +E I P   
Sbjct: 346 KSVIDIVPTNDSLLIEARIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELISP--D 403

Query: 376 QQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            Q +      YY+V ++   + +A    ++ +  G  AEV       T+   I+ PI
Sbjct: 404 SQADERSGSLYYKVQVRTHSSVVATQVGDLNILPGMVAEVDVITGRRTIMSYILRPI 460


>gi|126455129|ref|YP_001066324.1| HlyD family secretion protein [Burkholderia pseudomallei 1106a]
 gi|167845601|ref|ZP_02471109.1| HlyD family secretion protein [Burkholderia pseudomallei B7210]
 gi|242316802|ref|ZP_04815818.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 1106b]
 gi|126228771|gb|ABN92311.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 1106a]
 gi|242140041|gb|EES26443.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 1106b]
          Length = 469

 Score = 44.7 bits (104), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 83/417 (19%), Positives = 161/417 (38%), Gaps = 40/417 (9%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +I L+ W+    I+I  +  G+++    V ++ +   GI+++  V  G  + +G PL+  
Sbjct: 68  LIVLVLWATFFKIDIIAAGQGKVIPSTTVQQLSTLEGGIVRELLVREGQIVKKGQPLVRL 127

Query: 88  EDIETTDLIDLKKV-------SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           + +     +  +         SI  L+   D + + L     K +++     S EE +  
Sbjct: 128 DPVVAQGAVTEQAATREGLMASIARLQAEADGKATPLYPAGLKPEIV-----SEEEHV-- 180

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDL 199
                 +  ++  N  I  + +    K       Y  R+    N   LL          +
Sbjct: 181 -----RAQRAEALNSTIEVLQQQRAAKQAEAAD-YRGRIPQYVNNQHLL-------DDQI 227

Query: 200 TMMKNLFEKNAVSQNDLN--QQERI-VYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             M  L    +V+ N++   Q+ER  +    +  RE   +    +   +   +E    F 
Sbjct: 228 QRMLPLVGVGSVAPNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKIEEKISTFR 287

Query: 257 NYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           +  +E ++R   Q Q        K  IL++T     I SP+ G +      +    A   
Sbjct: 288 SEAREELARKQVQLQALEGTLSGKQDILDRT----LIRSPVNGIVKTLYITTIGGVASPG 343

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + ++ IVP +    I A++ P+ I +++ G  A VR   +         A +E I P   
Sbjct: 344 KSVIDIVPTNDSLLIEARIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELISP--D 401

Query: 376 QQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            Q +      YY+V ++   + +A    ++ +  G  AEV       T+   I+ PI
Sbjct: 402 SQADERSGSLYYKVQVRTHSSVVATQVGDLNILPGMVAEVDVITGRRTIMSYILRPI 458


>gi|256819931|ref|YP_003141210.1| secretion protein HlyD family protein [Capnocytophaga ochracea DSM
           7271]
 gi|256581514|gb|ACU92649.1| secretion protein HlyD family protein [Capnocytophaga ochracea DSM
           7271]
          Length = 359

 Score = 44.7 bits (104), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 95/431 (22%), Positives = 175/431 (40%), Gaps = 89/431 (20%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG-IIKKFQ 71
           HP  L  + LL+ + ++ L      + + ISVS+ G I +     E+ +P SG ++K F 
Sbjct: 3   HPIYLSILLLLTTV-VVALP----FIKVPISVSARGVIRSNFEDTELTAPVSGRVVKCFL 57

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            +N   + +G  LL    I TT+L++              T++  ++     Y+      
Sbjct: 58  SQNNQNVQKGDTLL----IITTELLN--------------TQQQLVNTQQQDYNA----- 94

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              + Q L  L  + +T  +   Y              + R+ +L R+        L+A 
Sbjct: 95  ---QLQDLTALVSHKNTPLQTPQYA-------------QERAAFLERI------GQLQAQ 132

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           LS  +K+L     LF K+ +++ +    E+I Y+         HE+  +LR +     + 
Sbjct: 133 LSLAKKELDRANQLFSKDVIAKAEY---EKIYYR---------HEE--LLRQVQSTQQQQ 178

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             ++     E+ R L+  Q   +DE      L + ++   +++PI GTI   +     N+
Sbjct: 179 YAQWQAQRTEVERKLQSLQ---SDEKR----LSQEQQNYVVIAPITGTIAQYKGIRQGNF 231

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
             Q Q +  I P   L      V+PK I  +        +   Y   +       +++ID
Sbjct: 232 LSQGQTIATISPEQNLI-AECLVSPKDIGFIHPSQNVRFQIDTYNYNQWGLLNGSVKEID 290

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV----LFTAK----NTTLA 423
                  N +  ++  E + KI     S   ++L+NG+   +     FTA+    N TL 
Sbjct: 291 ------KNLVVNEQTGEGLFKIR-CGISKGYLQLKNGYRGNINKGMSFTARFYLTNRTLW 343

Query: 424 QEIIHPITDNW 434
           Q ++   TD+W
Sbjct: 344 Q-LLFDRTDDW 353


>gi|295677457|ref|YP_003605981.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           sp. CCGE1002]
 gi|295437300|gb|ADG16470.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           sp. CCGE1002]
          Length = 414

 Score = 44.7 bits (104), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 27/259 (10%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R  L++  + L    S   K++ + + L  K  VS+ +L +  R       +LR  I E+
Sbjct: 167 RRALDDSVAALEKSYSLSGKEIGLAEPLAAKGLVSEVELLRMRR----QANDLRSQIVER 222

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +N  +       +AN E    L ++  +L Q   T    + +  +LE+T    T+++P+ 
Sbjct: 223 RNKFQA------DANSE----LTKLELELAQTSETV---VGRADVLERT----TVVAPVY 265

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+   +  +     Q  + +M+IVP      + A + P  +  +  G  ATV+   Y  
Sbjct: 266 GTVKNVRVNTIGGVIQPGEHIMEIVPLEDQLLVEAHIKPSDVAFLHPGQPATVKITAYDY 325

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQE----YYEVIL--KITDLAFSDNNIELRNGFPA 411
                    +E I P   + D           YY V++    ++L     ++ +  G  A
Sbjct: 326 GIYGGLTGKVEHISPDTLKDDQKAAAGRADATYYRVLVLTDTSELHAGGKSLPILPGMVA 385

Query: 412 EVLFTAKNTTLAQEIIHPI 430
            V       T+   ++ PI
Sbjct: 386 TVDIRTGEKTILDYLLKPI 404


>gi|53803696|ref|YP_114675.1| HlyD family secretion protein [Methylococcus capsulatus str. Bath]
 gi|53757457|gb|AAU91748.1| HlyD family secretion protein [Methylococcus capsulatus str. Bath]
          Length = 341

 Score = 44.7 bits (104), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 22/178 (12%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++DL  +  L +  A S   L+  E   YK          + K +L       D+A +  
Sbjct: 132 RRDLQRLDRLADAGAASAQSLDGAE-AAYK----------QAKALLDKNRSARDQAEIRL 180

Query: 256 ANYLKEISRDLEQNQRTFAD-EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                 I+    Q QR  A  E++++  LE TR    IL+PI GT V N S       Q 
Sbjct: 181 IALNALIAETRAQLQRAQARLELARID-LENTR----ILAPIDGT-VGNLSLQVGQLLQP 234

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              +  ++P   + ++ A     QI+H++ G TA+V    Y D   + F+A+++ + P
Sbjct: 235 GSVIAYLIPADGV-FVEANFKETQIEHLRIGQTASVVVDAYPD---RPFEAVVDSLAP 288


>gi|110633151|ref|YP_673359.1| HlyD family type I secretion membrane fusion protein [Mesorhizobium
           sp. BNC1]
 gi|110284135|gb|ABG62194.1| type I secretion membrane fusion protein, HlyD family
           [Chelativorans sp. BNC1]
          Length = 433

 Score = 44.7 bits (104), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 74/190 (38%), Gaps = 14/190 (7%)

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           EA  E      +IS +L+      AD +S+            I +PI G +      +  
Sbjct: 254 EAQRELTAVETKIS-ELKDRHMAIADRLSR----------TDIRAPITGIVNELNIHTIG 302

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                ++ L+ IVPH+    I  K+ P  I  V  G  A +RFP +      + K  +  
Sbjct: 303 GVITPAEVLVTIVPHNAKLNIEFKLNPASIDQVDVGRPARLRFPAFNQRVTPELKGEVTH 362

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           + P  +   + +  + YY   + ++    +      L  G P EV    +  T    ++ 
Sbjct: 363 VSP--ATAIDPVSGEVYYAGKISVSPEELAKLGESALLPGMPVEVYVMTQERTALSYLVK 420

Query: 429 PITDNWPKIF 438
           P+TD + K F
Sbjct: 421 PVTDQFNKAF 430


>gi|33865492|ref|NP_897051.1| leukotoxin secretion protein [Synechococcus sp. WH 8102]
 gi|33632661|emb|CAE07473.1| similar to leukotoxin secretion protein [Synechococcus sp. WH 8102]
          Length = 386

 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 140/332 (42%), Gaps = 86/332 (25%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           +G I +++   I+  V + GE+        +K+PF G+IK    + G ++  G  LL F+
Sbjct: 47  LGFI-FAVFAKIDEVVLAPGELQPLGAERPVKAPFGGVIKDIVAKEGQKVNAGDTLLRFD 105

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
                   D+ +   + L   I  E+        +++   +A E+R+  +++ L      
Sbjct: 106 -------ADVSRKRKETLETQIKLER-------KRFEEESRAVEARKRGVVERL------ 145

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
                    + + RSL  +     SIY N + L    ++           LT +  L ++
Sbjct: 146 ---------NGINRSLNTE----SSIYTNIIPLAEIGAM----------QLTEL--LRQR 180

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           N V Q +   Q   V K+ LE    +  Q N L+                L+EIS +LE+
Sbjct: 181 NKVEQLESEAQ---VVKADLE---EVEAQLNKLKQ-------------ESLREIS-ELER 220

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS-QPLMKIVPHSKL 327
                 D ++K          + + +PIAG IVY    SS+ YA  + + L+K+VP  + 
Sbjct: 221 QMVEVQDTITK----------EKLSAPIAG-IVYGMIPSSAGYAASAGETLVKVVPGGE- 268

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVR---FPH 354
             I AK  +T + +  +K G  A +R   FP+
Sbjct: 269 --IEAKIYITNQDVGFMKPGMKAQIRVDAFPY 298


>gi|237801265|ref|ZP_04589726.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331024124|gb|EGI04181.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 473

 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 67/329 (20%), Positives = 135/329 (41%), Gaps = 37/329 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I++  ++SG+I+       I+S  + ++K   V +G  +  G  LL  +   T+   D+ 
Sbjct: 78  IDVVATASGKIIPSGKTKTIQSSETAVVKAIHVRDGQSVKAGQLLLELDS--TSADADVG 135

Query: 100 KVSIKNLRCHIDTEKSA--LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           +V    L   +D+ ++A  LD +N +     K        ++D     H   ++ +  G 
Sbjct: 136 RVRSDLLAARVDSARAAAMLDAINQR-----KPPRDLAGTIVDA-DPMHVMAAERWLQGQ 189

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL---LSSHQKDLTMM-------KNLFE 207
              YRS         S+ L   +++ + + ++A    + S QK L +        +NL +
Sbjct: 190 YQEYRS---------SLDLVDAEIQQRQADIQAARIQVMSLQKTLPIATKLASDYENLLK 240

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD-- 265
           K  ++++   ++E    ++ L+L   +  Q+  +        EA       + +  R   
Sbjct: 241 KQYIARHAYLEKE----QARLDLERQLSVQQASVLQSTAARQEAERRREGVVAQTRRAML 296

Query: 266 --LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L+Q  +  A     LT      +  T+ +P+ GT+      +       +QPLM +VP
Sbjct: 297 DLLQQADQKIASFNQDLTKARYQEDLTTLEAPVDGTVQQLAVHTVGGVVTPAQPLMVLVP 356

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
             +   + A +  K I  V+ G   TV+ 
Sbjct: 357 DGQPVEVEAMLENKDIGFVRAGQPVTVKV 385


>gi|149197686|ref|ZP_01874736.1| HlyD family secretion protein [Lentisphaera araneosa HTCC2155]
 gi|149139256|gb|EDM27659.1| HlyD family secretion protein [Lentisphaera araneosa HTCC2155]
          Length = 502

 Score = 44.3 bits (103), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 81/386 (20%), Positives = 158/386 (40%), Gaps = 54/386 (13%)

Query: 22  LLSIIGI--IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +L  +GI  I +I WS    IEI     G+ +    +  I++   GII K   + G  + 
Sbjct: 35  VLGAMGIFVIFIIVWSHFSEIEIITRGMGKAVPSKEIQTIQNLEGGIISKMNAKEGQSVK 94

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS------ALDFLNN-KYDVL----- 127
           QG  L+  ++ +        +   ++ +C++    +       LDF +  K D L     
Sbjct: 95  QGELLIKLDNSKYLSAFKEMEADRRSTKCNLTRLYAEYKNLPTLDFSDELKMDELLCKTQ 154

Query: 128 EKAFESREEQLLDFLGKYHSTCS----KVFNYGISSVYRSLKM-----KLTRMRSIYLNR 178
              FE+R +Q    +  Y         ++F   +S V    +M     +    +++  N 
Sbjct: 155 SNLFEARRKQYSSRISGYEVKIKHLKVELFEQELSLVRLRAEMNQAEPEFKDFKTVNENM 214

Query: 179 LDLENKSSLLRALLSSHQK------------DLTMMKNLFEKNAVSQNDLNQQERIVY-- 224
           + LE +    R  +   QK            +L   ++L +  A S  ++ + ER V   
Sbjct: 215 VALETRLYETRKKIYEAQKTSIKSNQNILRKELEQTRDLEKNGAASMVEVLRLERQVMDM 274

Query: 225 KSTLE------LRE---NIHEQKNMLRHINELY---DEANLEF-ANYLKEISRDLEQNQR 271
           +S L+      LR+   +I  +K     +  L    + A  +F A++  EI+  +   + 
Sbjct: 275 ESALQSLESTRLRDITMSIESRKQSKVKLEGLLVDSESARSQFEADWFNEIASSIADYEA 334

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF--SSSNYAQQSQPLMKIVPHSKLTY 329
             +    K++ L  T ++  I SP+ G I  N+ F  +        QP+++I+P  +   
Sbjct: 335 KLSAVKEKISSLRDTVDRTEIKSPVDGVI--NEVFQRNEGGVVSPGQPILEIIPDDEKLV 392

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHY 355
           +   V+P+++  ++KG    V+   Y
Sbjct: 393 VEGMVSPQEVAFLRKGMPVIVKITAY 418


>gi|293604655|ref|ZP_06687056.1| LapA secretion membrane fusion protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292816942|gb|EFF76022.1| LapA secretion membrane fusion protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 473

 Score = 44.3 bits (103), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 85/412 (20%), Positives = 172/412 (41%), Gaps = 37/412 (8%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           L+ W+    I+  V   G+++    V  I+S   GI+++  V  G ++  G  LL  +  
Sbjct: 76  LLIWAATGSIDEVVRGEGKVVPSRQVQIIQSLDGGIVEEILVRPGQEVEAGQTLLKIDST 135

Query: 91  ETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                +   + + +S+      +    +   F+  + +VL++A       L++       
Sbjct: 136 RFASSLGENNAEYLSLLAKSARLQALATGEPFVAPE-EVLKQA-----PGLVEMERNAWQ 189

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             +   N  I+     LK +   +R     R    +++S    L S   ++L + + L +
Sbjct: 190 ARNTELNATINVAREQLKQRQEDLRETIAKR----DQASASCGLTS---RELQVTRPLLK 242

Query: 208 KNAVSQNDLNQQERIVYKSTLELR---ENIHEQKNMLRHINELYDEANLEFANYLK-EIS 263
             AVS+ DL + +R V +   E +     I   +  ++      +E+ L   N  + E+S
Sbjct: 243 SGAVSEVDLLRLQRDVARYCGEQKGAEAQIDRFQASIKEAQSKLEESELNIRNQARSELS 302

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI--VYNQSFSSSNYAQQSQPLMKI 321
              E N +       KL + ++ +  + + +P+AGTI  ++N +       Q  + +++I
Sbjct: 303 ---ETNTKLSTLRQGKLALADRVKLAE-VRAPLAGTIKTLFNNTV--GGVVQPGKDIIEI 356

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDN 379
           VP      +  ++ P+ I  +     A V+F  Y        +  +E+I  D +  ++ N
Sbjct: 357 VPKDDTLLLEVRIQPRDIGFLHADQKAEVKFTAYDFSIYGGLEGKVEQIGADTVTDEKGN 416

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLAQEIIHPI 430
           +     YY V ++       D  + +  G  AEV + T K T L Q ++ PI
Sbjct: 417 S-----YYVVRVRTDRSTVGDKLLPIIPGMVAEVHILTGKRTVL-QYLLKPI 462


>gi|125717930|ref|YP_001035063.1| multidrug resistance efflux pump/hemolysin secretion transmembrane
           protein [Streptococcus sanguinis SK36]
 gi|125497847|gb|ABN44513.1| Multidrug resistance efflux pump/hemolysin secretion transmembrane
           protein, putative [Streptococcus sanguinis SK36]
          Length = 402

 Score = 44.3 bits (103), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 35/59 (59%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           W+ L  I++ V  +GEI+ E+ V  + S  +GI+K   V+ G Q+ +GT +L  +D  T
Sbjct: 94  WASLSRIDVVVVGTGEIVPEERVQSVASLTNGIVKSMNVKEGDQVEKGTTILELDDAVT 152


>gi|223038831|ref|ZP_03609123.1| acriflavine resistance protein [Campylobacter rectus RM3267]
 gi|222879804|gb|EEF14893.1| acriflavine resistance protein [Campylobacter rectus RM3267]
          Length = 469

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 84/437 (19%), Positives = 176/437 (40%), Gaps = 50/437 (11%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P+  +++  +  I +  L+ W+    I+     SG+I+       +++   GII++  V 
Sbjct: 52  PSGSRKILYIVAITVFWLVVWASFAQIDEITRGSGKIIPSGKNQIVQNLEGGIIEEIYVH 111

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +   LL  +D   + +    K  +  L+           +L    +  ++ F++
Sbjct: 112 AGDEVKKNQILLKIDDKSFSSVYGESKFRLNELQAK---------YLRLYAESNDEEFDT 162

Query: 134 RE------EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           RE      ++ + F    + T        I  +   +K + + +R       +LE+K   
Sbjct: 163 RETGDKDYDRFVGFEKSLYDTNKARLREQIGILEEQIKQRQSELR-------ELESKIDQ 215

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHI 244
            ++  +  QK+  + + LF K  VS+ +  Q +R V     EL   + ++   ++ ++ +
Sbjct: 216 TQSSYNLLQKEKQITEPLFRKGLVSEVEYLQLQRRVNDLRGELSAAKLSVPRVQSTIKEV 275

Query: 245 NELYDEANLEFANYLK--------EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                EA L F N  K        EISR L ++Q   +D++          E+  + SP+
Sbjct: 276 ENKITEAKLAFQNSAKKEFNEVSAEISR-LNESQVNLSDKV----------ERTLVRSPV 324

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +      + S   +    + +IVP         KV P  +  +++G  A V+   Y 
Sbjct: 325 DGIVSKLMVNTVSGVIKPGMDIAEIVPVEDNLIAEVKVRPADVAFLRQGLKAMVKLTAY- 383

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEV 413
           D     +  +  ++  I +  + N +T E Y ++   TD   L   +  + ++ G  A  
Sbjct: 384 DF--AIYGGLEGEVTQISADTETNEKTGESYYLVRIKTDKNYLGSENKPLRIKVGMIASA 441

Query: 414 LFTAKNTTLAQEIIHPI 430
                  T+   ++ PI
Sbjct: 442 DIITGKKTVFDYLLKPI 458


>gi|270263080|ref|ZP_06191350.1| hypothetical protein SOD_d00960 [Serratia odorifera 4Rx13]
 gi|270042768|gb|EFA15862.1| hypothetical protein SOD_d00960 [Serratia odorifera 4Rx13]
          Length = 445

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 48/100 (48%)

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A+Y KE+   L Q Q   A+  SKLT+     +   I +P+ GT+V  + F++       
Sbjct: 261 ADYQKEVRTQLTQTQMDIAEYRSKLTMASNDLQYTEIRAPLDGTVVGLKVFTAGGVVSTG 320

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           +PL+ IVP ++   +  ++    +  V+ G    + F  +
Sbjct: 321 EPLLDIVPSNRRLDVEVQLPVNLVDKVQPGLQVDLMFTAF 360


>gi|90020939|ref|YP_526766.1| HlyD family secretion protein [Saccharophagus degradans 2-40]
 gi|89950539|gb|ABD80554.1| Type I secretion membrane fusion protein, HlyD [Saccharophagus
           degradans 2-40]
          Length = 461

 Score = 44.3 bits (103), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 67/334 (20%), Positives = 133/334 (39%), Gaps = 59/334 (17%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE-TTDL----IDLKK 100
             G+++    V  +++   GI+ +  V  G ++ +G  LL  +D +  + L    + L +
Sbjct: 78  GEGKVIPSQYVQVVQNLEGGILAELYVREGERVARGEKLLRIDDTQFASSLREAGVTLAQ 137

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K++R   ++   A      K                   G       +   Y     
Sbjct: 138 WELKSMRLRAESNGEAFKPEIKK-------------------GWPQFLVDQELAY----- 173

Query: 161 YRSLKMKLTRMRSIYLNRL--------DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           Y+S + +L   + IY  +L        +LE +   L+   +   ++L M + L  + A+S
Sbjct: 174 YQSRQQELAGNKEIYDQQLTQRKQELAELEARKEQLQRSYNLLNQELQMTRPLVSQGAIS 233

Query: 213 QNDLNQQERIVYKSTLEL----------RENIHEQKNMLRHINELY-DEANLEFANYLKE 261
           + +L + ER V     EL          + ++ E K  L  ++ ++  EA  E      E
Sbjct: 234 EVELLRLERQVNDLLGELEAAQLAIPRVKSSLDEAKEKLASVDIVFRREAQEELNKVTLE 293

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           +SR L++      D + +            ++SP+AGT+      +     Q    +++I
Sbjct: 294 LSR-LQETSEALVDRVKR----------TMVISPVAGTVKQLLVKTIGGVIQPGMDIVEI 342

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           VP  ++  + A+V P  I ++  G  A V+F  Y
Sbjct: 343 VPSEEIMLVEARVRPADIGYLHPGQKAKVKFSAY 376


>gi|83648754|ref|YP_437189.1| membrane-fusion protein [Hahella chejuensis KCTC 2396]
 gi|83636797|gb|ABC32764.1| Membrane-fusion protein [Hahella chejuensis KCTC 2396]
          Length = 456

 Score = 44.3 bits (103), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 152/372 (40%), Gaps = 63/372 (16%)

Query: 14  PAS-LKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           PAS L R  L +I+ +  + + W+    I+I   + G+++  + V  I+   + +I K  
Sbjct: 33  PASPLGRAILWAIVLLFTIAVIWACFGKIDIVAVTQGKVIPSERVKTIQPLETAVISKIH 92

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE--KSALDFLNNKY----- 124
           V +G Q+  G  L+T +  +     DL+++  +       ++  K+  D+L  +      
Sbjct: 93  VSDGQQVKAGDLLITLDGAQAE--ADLRRLDGEWRESAAQSQRYKAMADWLQQERAGSPV 150

Query: 125 ----DVLEKAFESREEQL-----------LDFLGKYHSTCSKVFNYGISSVYRSLK-MKL 168
               D L  + + +   L           L+ L +  +  +      ++ + +  + M++
Sbjct: 151 MPENDALPASLQQQHRNLLQQEAAEFTARLNALKREAARLNAEHEMTVAEITKQSRIMEV 210

Query: 169 TRMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFEKN---AVSQNDLNQQERIVY 224
            R R   +N LD ++N+       L S  + L + + L E     AV Q  L Q    + 
Sbjct: 211 LRER---VNALDVMQNRK------LGSRVQYLELKQELIEVEQDLAVQQARLKQLGASLA 261

Query: 225 KSTLELRENIHEQ-KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +  +    +HEQ KN L      + EA+   A+          Q +R  AD+ S+    
Sbjct: 262 ANEAQQETLLHEQYKNTLAQ----WREADTRAASL---------QEERIKADQRSR---- 304

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
                Q  + +PI GT+      +       +Q LM IVP      + A V  K I  V+
Sbjct: 305 -----QTRLTAPIDGTVQQLAVHTVGGVVTPAQELMLIVPEHSEMEVEALVLNKDIGFVQ 359

Query: 344 KGYTATVRFPHY 355
           +G+ A V+   +
Sbjct: 360 EGHFAEVKVDTF 371


>gi|146329021|ref|YP_001209458.1| type I secretion membrane fusion protein [Dichelobacter nodosus
           VCS1703A]
 gi|146232491|gb|ABQ13469.1| type I secretion membrane fusion protein [Dichelobacter nodosus
           VCS1703A]
          Length = 421

 Score = 44.3 bits (103), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 83/428 (19%), Positives = 162/428 (37%), Gaps = 52/428 (12%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           L++++G    + W+    +E      G ++       I+S   GI+    V+ G  + + 
Sbjct: 37  LMTLVG--AFLFWAYHSDLEEVTVGQGAVIPSSREQLIQSLDGGILNALYVKEGQLVEKD 94

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            PLL  +D  ++ L+   +  +++L   +   +S                E+ +E L   
Sbjct: 95  QPLLKMDDTRSSALLRESQAKVESLTAMLTRYRS----------------EAYDEPL--- 135

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             ++ S  S       +S +++ K  L            LE     L+  L      +T 
Sbjct: 136 --QFSSDLSAEIRQRETSAFQAGKNALQAKTE------GLEKSIIFLKKSLDFLNDQVTR 187

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           M+ + ++   SQ              LEL     +Q+ +   I  LY++ N   A YLKE
Sbjct: 188 MEAMVKRGVASQ--------------LELSRMQQQQQEISNQIQSLYNQINDARALYLKE 233

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            + +L +     A  +  +        +  I SP+ G +   +  +        + +M+I
Sbjct: 234 ANENLVRTDSELAQALENVARYADPVARSEIRSPVRGIVNNIRINTVGGVINAGEEIMEI 293

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQ 376
           VP  +   ++A + P+ +  +  G +A V+   Y        +  +  + P       S+
Sbjct: 294 VPIDETLLVQAYIRPQDVAFIHPGQSAVVKLSAYDYSVYGGLEGKVTLLSPDTLKDERSR 353

Query: 377 QDNNLQT-QEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIHPITD 432
              NL   Q YY V+++      +D N E   +  G  A V       T+ + +I P+T 
Sbjct: 354 SQLNLDANQSYYRVLVETHGSKLTDKNGEELPIIPGMIATVDIKTGTKTVFEYLIRPVTR 413

Query: 433 NWPKIFER 440
               + ER
Sbjct: 414 MKQALRER 421


>gi|71736906|ref|YP_275247.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71557459|gb|AAZ36670.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 428

 Score = 44.3 bits (103), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 77/428 (17%), Positives = 157/428 (36%), Gaps = 35/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G      W+ L P++  ++  G ++       ++S   G++ K  V  G  + +G
Sbjct: 10  ILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQSVKEG 69

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLD 140
            PL   +  +        +  +++LR       ++L    ++ D L++  F +  E +  
Sbjct: 70  EPLFRLDQTQV-------EADVQSLRAQYRMAWASLARWQSERDNLDEVHFPA--ELIAA 120

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALL 192
             G+       +   G   ++ S +  L R +S          L    +    S L A  
Sbjct: 121 GQGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQA 180

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S +K L+ ++ L +   +  N L + +  + +    L +N  E   + + I E      
Sbjct: 181 DSLRKQLSNLEPLAQNGFIPGNRLLEFQSQLSQVQQSLAQNAGETGRIEQGIVESRLRLQ 240

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQS 305
            +   Y KE+       +  +AD   K   LE+       + +   IL+P  G  V    
Sbjct: 241 QQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNLGV 293

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + L++IVP      +  ++  + I  V       + F  +   R  +   
Sbjct: 294 HTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVSG 353

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     Q  +    Q YY +   + D      N + ++ G PAE+       +L  
Sbjct: 354 EVNLIS--ADQMQDEKTGQPYYVLRTSVGDAVLEKLNGLVIKPGMPAEMFVRTGERSLLN 411

Query: 425 EIIHPITD 432
            +  P+ D
Sbjct: 412 YLFKPLLD 419


>gi|94498286|ref|ZP_01304846.1| Type I secretion membrane fusion protein, HlyD [Sphingomonas sp.
           SKA58]
 gi|94422288|gb|EAT07329.1| Type I secretion membrane fusion protein, HlyD [Sphingomonas sp.
           SKA58]
          Length = 433

 Score = 44.3 bits (103), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 82/417 (19%), Positives = 163/417 (39%), Gaps = 43/417 (10%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           I W+ L  I+ +V ++G ++    +  + +   G++++  V+ G  + QGTPL+    ++
Sbjct: 34  IGWAALTEIDRTVRANGRVIPSSQLQVVSNLEGGVVEQIMVKVGQDVRQGTPLVRLSPVQ 93

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                             ++   ++ D LN K   L      +         K+  + + 
Sbjct: 94  PG--------------AELEGNLASSDALNFKIVRLTAEITGQTP-------KFPQSRNA 132

Query: 152 VFNYGIS---SVYRSLKMKLTRMRSIYLNRLD-----LENKSSLLRALLSSH---QKDLT 200
           +    I+    +YRS   +L  + ++   R+D     +   S+  +A +++    Q DL 
Sbjct: 133 MMAAQIAVEQGLYRSRMAELASISNVASARVDQARRAIAEASAAEQARIAARDAAQADLN 192

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           +++ L  +    +  L Q E     ST E              + E    A  +  ++L 
Sbjct: 193 LVRPLVREGIEPRRSLLQAESSYAVSTSEAAGAAAALARARSVLAEAQASAQQQRRDWLT 252

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS--NYAQQSQPL 318
             + +L   +   +   + +   E    +  + +P+ G I  N+ F ++     +    L
Sbjct: 253 RAADELTAARADLSVRQATMPAYEYKLRRTVVRAPLDGRI--NRVFVTTVGGSVRPGDSL 310

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +++V  +    I A V  K I  VK G  A V+   Y        K  +  + P      
Sbjct: 311 LEMVAINDTLLIEAAVAAKDIASVKLGQQAKVQISAYDSAVYGSMKGKVVAVSP--DAVL 368

Query: 379 NNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEV-LFTAKNTTLAQEIIHPIT 431
           N    + +Y V ++ T  A +D+    + +  G  AEV L   K T LA  I+ P+T
Sbjct: 369 NERTGESHYLVRVRTTANAITDDAGRRLPIGPGMGAEVNLLGDKRTVLAY-ILTPLT 424


>gi|91791749|ref|YP_561400.1| Type I secretion membrane fusion protein, HlyD [Shewanella
           denitrificans OS217]
 gi|91713751|gb|ABE53677.1| Type I secretion membrane fusion protein, HlyD [Shewanella
           denitrificans OS217]
          Length = 460

 Score = 44.3 bits (103), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 71/377 (18%), Positives = 159/377 (42%), Gaps = 21/377 (5%)

Query: 19  RMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R+ + ++ G+ +  I W+    ++   + +G+++    V  I S   G++++  VE G  
Sbjct: 29  RLIIWTLTGMMVSFIIWAYFSELDQVTTGTGKVIPSSQVQLIDSLDGGVLQEIFVEEGVL 88

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL---NNKYDVLEKAFESR 134
           + +G PL   +D         ++  +  L+ ++   ++ LD +   +   +  E+   ++
Sbjct: 89  VTKGQPLARIDDTRFRSDFAQQEQEVYGLQTNVLRMRTELDSILISDMSSNWREQVLITK 148

Query: 135 EE-----QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           ++     +L++   +      + +N  + ++   L++ + +++       +L +K + L 
Sbjct: 149 QDLVFPVELIEQEPELVKRQQEEYNGRLDNLSNQLEILVRQIQQRQQEIEELASKITTLT 208

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELY 248
                  ++L + + L +K  V + +L + ER V     EL+        +LR  +  L 
Sbjct: 209 KSYQLVSRELELTRPLAQKGIVPEVELLKLERTVNDIQGELK-----TLRILRPKMKALM 263

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKL-----TILEKTREQKTILSPIAGTIVYN 303
           DEA L+    +   + DL         ++S++        +K   +  I SP+ GTI   
Sbjct: 264 DEAILKRREAVFIYAADLRAQLNELQTKLSRMNQAQIGAFDKV-SKAVITSPVNGTIKTI 322

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +  +  Q  + +++IVP      I  K+ PK I  +  G  A V+   Y   R    
Sbjct: 323 HINTLGSVVQPGEEIIEIVPSEDQLLIETKIAPKDIAFLHPGLPAIVKVTAYDFTRYGGL 382

Query: 364 KAIIEKIDPIISQQDNN 380
           +  +E I    SQ +  
Sbjct: 383 QGTVEHISADTSQDEEG 399


>gi|296283660|ref|ZP_06861658.1| type I secretion membrane fusion protein, HlyD family
           [Citromicrobium bathyomarinum JL354]
          Length = 479

 Score = 44.3 bits (103), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 68/358 (18%), Positives = 133/358 (37%), Gaps = 31/358 (8%)

Query: 9   LKRNHPASLKRMTLLSII-GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           ++R  P     + L+ I+   +  +TW+ +  ++ +V ++G ++    +  + +   GI+
Sbjct: 56  IERFRPGGAANLLLVMILLFTVAAVTWAAVTELDRTVRATGRVIPLGRLQVVSNQEGGIV 115

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  VE G  + +G P++  +  E    +  K+ ++  L   I   ++ +      Y V 
Sbjct: 116 SEILVETGDLVDKGQPMVLLDLTEAGSDLQSKQATLDALNAKIARLEAEIAGRRPVYPVA 175

Query: 128 ---EKAFESREEQLLDF-----LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              E A + R EQ L       L    S           SV ++      R  +  L R 
Sbjct: 176 DNPETAAQIRIEQSLHAARLAELADAESVARARIGQAQRSVTQAEAALAGRRTAAQLARS 235

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE-RIVYKSTLELRENIHEQK 238
           + +  + L+   +            L  + A +Q  + Q E      +  + R+ + E +
Sbjct: 236 EADTIAGLVAKGIEPR---------LAGQQAEAQASMAQSEAEQALAAVTQARDAVSEAR 286

Query: 239 NMLRHI-NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             L  + N    +A  E A    E            A     +  L    E+ TI SP+ 
Sbjct: 287 AGLTQVRNSWRAQAGDELATAQAE-----------LASRQEVMPALVARVERSTITSPVR 335

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           G +      +          ++++V  S+   I A V P+ I  V+ G  AT+    Y
Sbjct: 336 GRVNRVLVTTIGAAVAPGAEIVEVVASSEQLAIEASVAPQDIASVRLGQRATIDISAY 393


>gi|242237930|ref|YP_002986111.1| hypothetical protein Dd703_0478 [Dickeya dadantii Ech703]
 gi|242129987|gb|ACS84289.1| conserved hypothetical protein [Dickeya dadantii Ech703]
          Length = 436

 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 17/115 (14%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           LI   +L+P+  SV +  E++  +  V + +P  G+I+ F V+    + +G PL+ F+D 
Sbjct: 180 LIAACLLIPVRQSVLAPAEVIPFNGRV-VAAPLDGVIQSFAVQPNQSVRKGDPLVRFDDT 238

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV-LEKAFESREEQL-LDFLG 143
                          L+   D  + AL+    +Y    ++AF+  + +  LDFL 
Sbjct: 239 --------------TLKAQADVAERALNVAEAEYRASSQRAFQDADSKARLDFLA 279


>gi|146306833|ref|YP_001187298.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           mendocina ymp]
 gi|145575034|gb|ABP84566.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           mendocina ymp]
          Length = 452

 Score = 43.9 bits (102), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 149/366 (40%), Gaps = 35/366 (9%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++  + W+    +E   +  G+ +    V  I++   GI+ +  V  G  + +G  LL  
Sbjct: 50  LLAALVWAHFAVLEEVTTGEGKAIPSSKVQVIQNLEGGIVSEIFVREGQVVDKGDTLLRL 109

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +D              + L    +TE   L  +  + + L    E R  QL + + +   
Sbjct: 110 DDT-------------RFLSNRGETEADRLALIA-RLERLGAEAEGRAPQLPEEITRDAP 155

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL--------DLENKSSLLRALLSSHQKDL 199
             ++       ++YRS + +L   +     +L        +  +K+   R+ L   Q++L
Sbjct: 156 QLAE----DQLALYRSRQQRLRSEQRTLGEQLRQKEQELAEFRSKAQQYRSSLGLLQQEL 211

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVY--KSTLELRE-NIHEQKNMLRHINELYDEANLEF- 255
            M + L    A+S+ ++ +  R V   + +LE     I   +  +  I    +E+ L F 
Sbjct: 212 NMSQPLVASGAISEVEVLRLRRSVVEVRGSLEATNLAIPRAEAAMSEIKSKMEESELAFR 271

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A   KE++    + Q+  A   + + I +K   + T+ SP+ G I   +  +     Q  
Sbjct: 272 AEAFKELNEVRTELQKITA---TSVAIQDKV-TRTTVTSPVRGVIKQLKVNTIGGVVQPG 327

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-II 374
             +++IVP      I AKV P+ +  +  G  A V+F  Y        KA +E I    I
Sbjct: 328 SDMLEIVPLDDSLLIEAKVRPQDVAFLHPGQKAMVKFTAYDYTIYGGLKANLELISADTI 387

Query: 375 SQQDNN 380
           S ++ N
Sbjct: 388 SDEEGN 393


>gi|154706061|ref|YP_001425441.1| type I secretion adaptor protein (HlyD family) [Coxiella burnetii
           Dugway 5J108-111]
 gi|154355347|gb|ABS76809.1| type I secretion adaptor protein (HlyD family) [Coxiella burnetii
           Dugway 5J108-111]
          Length = 442

 Score = 43.9 bits (102), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 83/374 (22%), Positives = 163/374 (43%), Gaps = 43/374 (11%)

Query: 5   MWKNLKRNHPASL--KRMTL-LSII--GIIG-LITWSILLPIEISVSSSGEILNEDNVVE 58
           +W   K+    S+  +R+ L L+II  GI+   I W+  + I+    + GEI   + +  
Sbjct: 6   LWYLPKKTQIESIQSRRLALSLAIIICGILAAFIIWAYFVRIQELSLAVGEITPVNRISV 65

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK--NLRCHIDTEKSA 116
           ++    G++ +  V+ GSQ+ +G PL   +  ET    +L+++  K   L  +++ EKS 
Sbjct: 66  VEHLEGGLVYQILVDEGSQVKKGQPLAKID--ETLAKAELQQLEAKRLTLMSNVEREKSL 123

Query: 117 LDFLNNKYDVLEKAFESREE-----QLLDFLGKYHSTCSKVFNYGISSVYRSLKMK---L 168
           ++  +    +   A  + E      ++L+   + H   S+  N   + + + +  +   L
Sbjct: 124 IEKTDFSPTLPATAVHNNEPDISVNEILERQQQLHQIQSQALNAQQAVIVQQILQREEEL 183

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER---IVYK 225
            ++R     +L+   K+++L      H++++TM + L E   +S+ DL + ER       
Sbjct: 184 LKLR----QQLETAKKNAVL------HREEVTMFRKLIEPGYISRLDLIRAERSLNTAEG 233

Query: 226 STLELRENIHEQKNMLR----HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
           +  EL + I   K  L+     + EL      + A+ L+    +L Q Q  FA +  K  
Sbjct: 234 TVTELTKEISIAKQALQEAESRLAELIQTEMQKMADRLQRSQHELFQVQ--FAIQKLKYH 291

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +         + +PIAGT++ N   +           M IVP +       ++ P  I  
Sbjct: 292 L-----ANTVVRAPIAGTVI-NMKITEGKVLAAGGFAMNIVPLNAPLRAEIRIRPADIGF 345

Query: 342 VKKGYTATVRFPHY 355
           ++ G    V+   Y
Sbjct: 346 IRIGDPVLVKVTAY 359


>gi|92118744|ref|YP_578473.1| secretion protein HlyD [Nitrobacter hamburgensis X14]
 gi|91801638|gb|ABE64013.1| secretion protein HlyD [Nitrobacter hamburgensis X14]
          Length = 385

 Score = 43.9 bits (102), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 9/139 (6%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +HE+   L+H       A+ +      E S+ + Q  R  A E      L  T    TI 
Sbjct: 178 LHEKTAQLQHGQSALLAAHKKVDVLTTERSKAVAQVARAHAVERQMALNLSYT----TIT 233

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P+ GT V  ++     Y     PLM +VP   + YI A     Q+ HV++G    VR  
Sbjct: 234 APVDGT-VGARALRVGQYVTAGTPLMAVVPLDAV-YIVANFKETQLTHVRQGQPVDVRID 291

Query: 354 HYADIREKKFKAIIEKIDP 372
            + D+R    K  ++ + P
Sbjct: 292 SFHDVR---LKGHVDSLSP 307


>gi|317403307|gb|EFV83823.1| HlyD-family secretion protein [Achromobacter xylosoxidans C54]
          Length = 478

 Score = 43.9 bits (102), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 53/243 (21%), Positives = 108/243 (44%), Gaps = 21/243 (8%)

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR---ENIHEQKNMLRHINELYDEANL 253
           ++L + + L +  AVS+ DL + +R V +   E +     I   +  ++      +E+ L
Sbjct: 237 RELQVTRPLLKSGAVSEVDLLRLQRDVARYCGEQKGAEAQIDRIQASIKEAQSKLEESEL 296

Query: 254 EFANYLK-EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI--VYNQSFSSSN 310
              N  + E+S   E N +       KL + ++ +  + + +P+ GT+  ++N +     
Sbjct: 297 NIRNQARNELS---ETNTKLSTLREGKLALADRVKLAE-VRAPVRGTVKTLFNNTVG--G 350

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q  + +++IVP      +  ++ P+ I  +     A V+F  Y        +  +E+I
Sbjct: 351 VVQPGKDIIEIVPKDDTLLLEVRILPRDIGFLHPDQKAEVKFTAYDFAIYGGLEGKVEQI 410

Query: 371 --DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLAQEII 427
             D +  ++ N+     YY V ++       D N+ +  G  AEV + T K T L Q ++
Sbjct: 411 GADTVTDEKGNS-----YYVVRVRTDRSTVGDKNLPIIPGMVAEVHVLTGKRTVL-QYLL 464

Query: 428 HPI 430
            P+
Sbjct: 465 KPV 467


>gi|330960763|gb|EGH61023.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 473

 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 67/329 (20%), Positives = 135/329 (41%), Gaps = 37/329 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I++  ++SG+I+       I+S  + ++K   V +G  +  G  LL  +   T+   D+ 
Sbjct: 78  IDVVATASGKIIPSGKTKTIQSSETAVVKAIHVRDGQSVKAGQLLLELD--STSADADVG 135

Query: 100 KVSIKNLRCHIDTEKSA--LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           +V    L   ID+ ++A  LD +N +     K        +LD     H   ++ +  G 
Sbjct: 136 RVRSDLLAARIDSARAAAMLDAINQR-----KPPRDLTGTILDA-DPMHVLAAERWLQGQ 189

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL---LSSHQKDLTMM-------KNLFE 207
              YRS         S+ L   +++ + + ++A    + S QK L +        +NL +
Sbjct: 190 YQEYRS---------SLDLVDAEIQQRQADIQAARIQVMSLQKTLPIATKLAGDYENLLK 240

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD-- 265
           K  ++++   ++E    ++ L+L   +  Q+  +        EA       + +  R   
Sbjct: 241 KQYIARHAYLEKE----QARLDLERQLSVQQASVLQSTAARQEAERRREGVVAQTRRAML 296

Query: 266 --LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L+Q  +  +     LT      +  T+ +P+ GT+      +       +QPLM +VP
Sbjct: 297 DLLQQADQKISSFNQDLTKARYQEDLTTLEAPVDGTVQQLAVHTVGGVVTPAQPLMVLVP 356

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
             +   + A +  K +  V+ G   TV+ 
Sbjct: 357 DGQPVEVEAMLENKDVGFVRAGQPVTVKV 385


>gi|299770833|ref|YP_003732859.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter sp. DR1]
 gi|298700921|gb|ADI91486.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter sp. DR1]
          Length = 398

 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 87/402 (21%), Positives = 152/402 (37%), Gaps = 86/402 (21%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLIT---WSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           N+  + P  L R +L+  I  IGL+    W+ +  +E   + +G+++       I+S   
Sbjct: 15  NVSYSEP-PLPRASLVIWIVGIGLVIFFIWAWVFKLEEVSTGTGKVIPSSKEQVIQSLEG 73

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           GI+ K  V+ G  + +G  L   +         E+  L+   + +   LR  ++   + L
Sbjct: 74  GILTKLNVQEGDIVQKGEILAQLDPTRFASNVGESRSLLISAQATAARLRAEVNG--TPL 131

Query: 118 DF----LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            F    +     VLE+                            +++YRS          
Sbjct: 132 VFPEIVMKEPKLVLEE----------------------------TALYRS---------- 153

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               R DLE   S L+  L   Q++L M + L  K A S+ ++           L LR  
Sbjct: 154 ---RRADLEQTLSGLKQALQLVQQELAMTEPLVAKGAASEVEV-----------LRLRR- 198

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQK 290
              + N LR  N++ D  N  +    +E+S+   D E  Q+        L       ++ 
Sbjct: 199 ---EANDLR--NKMNDAQNQYYVKAREELSKANTDSETQQQIVLGRSDSL-------DRA 246

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
              +P+ G +      +      Q+  LM IVP  +   I A++ P+ I  ++ G  A V
Sbjct: 247 VFKAPVRGVVKEIAVTTHGGVIPQNGKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALV 306

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +   Y        K  +  I P  + +D   Q Q YY V ++
Sbjct: 307 KITAYDYSIYGGLKGKVTVISP-DTIRDEVKQDQFYYRVYIR 347


>gi|254441734|ref|ZP_05055227.1| hypothetical protein OA307_1149 [Octadecabacter antarcticus 307]
 gi|198251812|gb|EDY76127.1| hypothetical protein OA307_1149 [Octadecabacter antarcticus 307]
          Length = 207

 Score = 43.9 bits (102), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 22/187 (11%)

Query: 230 LRENIHEQK---NMLRHINELYDEANL----EFANYLKEISRDLEQNQRTFADEMSKLTI 282
           L E  H +K   + L   NE+   A L    E+++ L  ++  L Q+ R   D +++   
Sbjct: 30  LHEVSHARKSNSDALNQYNEIVTRAELDRASEYSDVLSALA-TLRQDLRVAEDRLTR--- 85

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                   TI SP+ G +V N   +      +  + + +I+P     ++ A+V+P  I H
Sbjct: 86  -------TTITSPMRG-VVNNLGVTRIGGVIRPGEMIFQIIPLDDELFVEAEVSPSNIAH 137

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFS 399
           V  G  AT++   Y  +       +++ I     + D +     +Y V L++   +L   
Sbjct: 138 VIPGQAATIKLSAYDFMIYGSLTGVVQLISADTFEDDRDPNAAPHYRVTLRLDTAELGTR 197

Query: 400 DNNIELR 406
              IE+R
Sbjct: 198 QAQIEIR 204


>gi|260776964|ref|ZP_05885858.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260606630|gb|EEX32904.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 463

 Score = 43.9 bits (102), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 85/448 (18%), Positives = 184/448 (41%), Gaps = 50/448 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P+S + M  + ++  I    W+    I+      G+++    +  +++   G++K+  
Sbjct: 27  NTPSSARIMLWVMVLFFILAGAWASWAQIDKVTVGQGKVVPSSQIQVVQNLEGGLVKEIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G  + +G  LL  +D         ++  + NL   +    +++  ++   D  EK++
Sbjct: 87  VREGQIVQKGQQLLLIDDTRFRSDFREREQQVANLTASVLQLSASITSVSVNEDFSEKSW 146

Query: 132 ESREEQLLDF------------LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +   +  LDF              K  +     +   ++++   + +   +++    + +
Sbjct: 147 QQSVQ--LDFSKLAFPPELEERQPKLVARQRAEYRQDLNNLRNQISVIDQQVKQKQQDLV 204

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-------QNDLNQQERIVYKSTLE--- 229
           +++ + S LR   +  +K+L + K L ++  V        Q  +N   R +  S L+   
Sbjct: 205 EIQARVSNLRESYNFARKELEITKPLADEGVVPRIELLKLQRQVNDTRREMTSSELKVPV 264

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEK 285
           LR +I E  +ML  I    D A      +  E    L + Q    D++S LT     LE 
Sbjct: 265 LRSSIKE--SMLSRI----DAAQ----KFRSEQQEKLNEAQ----DKLSALTESTVGLED 310

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              +  ++SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++  
Sbjct: 311 RVNRTVVVSPVTGTVKTLNVNTVGGVIQPGMDIVEIVPSEDTLLVEAKIAPQDIAFLRPE 370

Query: 346 YTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAF-SDNN 402
             A V+F  Y   +    +  +E I  D    ++ N+     +Y V ++  + +  +D +
Sbjct: 371 LHAIVKFSAYDFTKYGGLEGTLEHISADTTTDEEGNS-----FYLVRVRTKETSLNNDTS 425

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           + +  G  A V       T+ + ++ PI
Sbjct: 426 LPIIPGMTASVDIITGKRTVMEYLLKPI 453


>gi|126641289|ref|YP_001084273.1| RND efflux transporter [Acinetobacter baumannii ATCC 17978]
          Length = 366

 Score = 43.9 bits (102), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 26/217 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R DLE   S LR  L   Q++L M + L  K A S+ ++           L LR   ++ 
Sbjct: 123 RADLEQTLSGLRQALQLVQQELAMTEPLVAKGAASEVEV-----------LRLRREANDL 171

Query: 238 KNMLRHI-NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SP 295
           +N +    N+ Y +A  E    L + + D +  Q+        L        Q+ +  +P
Sbjct: 172 QNKMNDARNQYYVKAREE----LSKANTDTQTQQQVVMGRNDSL--------QRAVFKAP 219

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +      +      Q+  LM IVP  +   I A++ P+ I  ++ G  A V+   Y
Sbjct: 220 VRGVVKEITVTTHGGVIPQNGKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKITAY 279

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
                   K  +  I P  + +D   Q Q YY V ++
Sbjct: 280 DYSIYGGLKGKVTVISP-DTIRDEVKQDQFYYRVYIR 315


>gi|229590599|ref|YP_002872718.1| putative HlyD family secretion protein [Pseudomonas fluorescens
           SBW25]
 gi|229362465|emb|CAY49371.1| putative HlyD family secretion protein [Pseudomonas fluorescens
           SBW25]
          Length = 437

 Score = 43.9 bits (102), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 79/425 (18%), Positives = 158/425 (37%), Gaps = 34/425 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEIL--NEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           LL+++G  G   W+ L P++  +   G ++   +   V+  SP  G++ +  V+ G  + 
Sbjct: 24  LLTLVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTLSP--GVVSRILVKEGEHVK 81

Query: 80  QGTPLLTFEDIE-TTDLIDLKK------VSIKNLRCHIDTEKS---ALDFLNNKYDVLEK 129
           QG PL   +  +   D+  L+        S+   +   D   S     +   N    L  
Sbjct: 82  QGQPLFRLDQTQHQADVQSLQAQYRMAWASVARWQSERDNHASIRFPAELSANPDPALAL 141

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             E  + QL        S+  + F    + +  ++     ++  +   R DL  ++  LR
Sbjct: 142 VLEG-QRQLF-------SSRREAFAREQAGIRANIDGASAQLGGMRRARSDLTAQAQSLR 193

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             LS+       ++ L +   + +N L + +R + +   +L +N  E   + + I E   
Sbjct: 194 DQLSN-------LQPLADNGYIPRNRLMEYQRQLSQVQQDLAQNSGESGRVEQGILESRL 246

Query: 250 EANLEFANYLKEISRDLEQNQ-RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +       Y KE+   L   Q R+   E  +LT      +   I +P  G  V     + 
Sbjct: 247 KLQQHSEEYQKEVRSQLADAQLRSLTLEQ-QLTSAGFDLQHSEINAPADGIAVNLSVHTE 305

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +  + L++IVP      +   +    +  V       + F  +   R  +    + 
Sbjct: 306 GAVVRAGETLLEIVPQGTRLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGEVS 365

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEII 427
            I     Q  +      YY +   ++D A    + + ++ G PAE+       +L   + 
Sbjct: 366 LIS--ADQMLDEKTGAPYYVLRTTVSDAALEKLHGLVIKPGMPAEMFVRTGERSLLNYLF 423

Query: 428 HPITD 432
            P+ D
Sbjct: 424 KPLLD 428


>gi|325673587|ref|ZP_08153278.1| pyruvate dehydrogenase E2 [Rhodococcus equi ATCC 33707]
 gi|325555608|gb|EGD25279.1| pyruvate dehydrogenase E2 [Rhodococcus equi ATCC 33707]
          Length = 370

 Score = 43.9 bits (102), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 16/59 (27%), Positives = 39/59 (66%), Gaps = 1/59 (1%)

Query: 31 LITWSILLPIEISVSSS-GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
          L++W++ +   ++++++ GE+      VE+ SPF+G++++  V+ G+ +  GTP++  E
Sbjct: 21 LVSWAVAVGDTVALNATIGEVETAKASVELPSPFAGVVRELLVQPGTTVPVGTPIIRVE 79


>gi|238760421|ref|ZP_04621560.1| Hemolysin transport protein [Yersinia aldovae ATCC 35236]
 gi|238701373|gb|EEP93951.1| Hemolysin transport protein [Yersinia aldovae ATCC 35236]
          Length = 458

 Score = 43.9 bits (102), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 73/355 (20%), Positives = 143/355 (40%), Gaps = 43/355 (12%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +R   L    +  ++ WSI+  ++I  S+SG+++  ++   I+    G++    V +G +
Sbjct: 46  RRTAWLLAFTLFLVLIWSIVGRLDIHASASGKVIVAEHSKVIQPLEPGVVVAINVRDGDR 105

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFES 133
           +  G  L+    I      +L  +S + +  H++  + A     D L N        F  
Sbjct: 106 VDAGQILIELSPIGID--AELGNISQQLMHRHLEAARMAALLTDDPLAN--------FSP 155

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            +    + +    +   K  N   + + R                  + N+++LL+ +  
Sbjct: 156 PDGSAPNLVSASSALLLKEHNEVSAELSRQESEMAVNQAQFQAGITSVANQNALLKNI-- 213

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ-----------KNMLR 242
            HQ+ L  ++ L +  +++Q +L  QER    +  E     HEQ           +  L 
Sbjct: 214 -HQR-LEALRTLAKSKSIAQVELLVQEREWLVARAEASRLQHEQEILQAKTYSLAQTRLH 271

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
           ++ E  D +  E  N  +E+   L+Q Q         + + EK R+Q T+ +P+AG I  
Sbjct: 272 YLAE-KDRSYRERLNKTQEVISQLQQEQ---------IKLTEKQRQQ-TLRAPVAGVIQQ 320

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
               +       +QPLM +VP +    +   +  K +  V  G    V+   FP+
Sbjct: 321 LAVHTHGGVVTAAQPLMVLVPENHPLELDVMILNKDVGFVLPGQEVEVKVDSFPY 375


>gi|222147843|ref|YP_002548800.1| ABC transporter membrane spanning protein (bacteriocin)
           [Agrobacterium vitis S4]
 gi|221734831|gb|ACM35794.1| ABC transporter membrane spanning protein (bacteriocin)
           [Agrobacterium vitis S4]
          Length = 462

 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 72/352 (20%), Positives = 148/352 (42%), Gaps = 51/352 (14%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++GL  WS L  I+ +V  SG +  E N   ++    GI++   V+ G  +  G  LL  
Sbjct: 53  VLGLGAWSALTTIQGAVVGSGTVEVETNRQVVQHQAGGIVQDLLVKEGDVVQPGQVLLRM 112

Query: 88  -EDIETTDL--IDLKKVSIKNLRCHIDTE---KSALDF-----------------LNNKY 124
            E ++ ++L  I+ +  S+      +  E   KS + F                 +  + 
Sbjct: 113 DEKLDQSELTIIENQLFSLLGNAGRLTAEQDGKSEISFDPELVERAKTDSHVREIIEGQR 172

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++L+   E+R++Q+     + H T  ++   G+++   +L+ +    R +    L ++ K
Sbjct: 173 NLLQARQENRDKQVGQLQERKHQTAQQI--EGLNAKLNALRQQ----RQLISEELAVQQK 226

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE-QKNMLRH 243
             LLR  L+   K +T+ ++  E +    + +         S  E R  I E +  +L  
Sbjct: 227 --LLRDGLTQTSKVMTLQRSEVEADGEIASSM--------ASIAESRAKIAEIEIAILNV 276

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             EL +++  +  N   +I+ +L Q +      +S L  L +T     + +P  G +   
Sbjct: 277 SGELREQSITDLRNAEAQIA-ELRQKR------VSSLETLGRTE----VTAPTGGVVFGL 325

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
              +     + ++P++ I+P +    I   + P +I  V  G  A + F  +
Sbjct: 326 TVHALRTVVKAAEPILYIIPQNVGLVITTNLPPNEIDQVHVGQKADLVFAAF 377


>gi|119385140|ref|YP_916196.1| HlyD family type I secretion membrane fusion protein [Paracoccus
           denitrificans PD1222]
 gi|119374907|gb|ABL70500.1| type I secretion membrane fusion protein, HlyD family [Paracoccus
           denitrificans PD1222]
          Length = 399

 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 3/103 (2%)

Query: 291 TILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           T+ SP+ G IV N   S+       +  LM I+P      I AK+TP+ I  ++ G +AT
Sbjct: 248 TLRSPVRG-IVKNIEVSTIGGVVSPNGKLMDIIPLDDQLMIEAKITPRDIAFIRPGLSAT 306

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           V+   Y        K  +  I P   Q + N + Q YY V+++
Sbjct: 307 VKVSAYDYAVYGGLKGEVVTISPDTIQDEIN-RDQFYYRVLIR 348


>gi|148548366|ref|YP_001268468.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida F1]
 gi|148512424|gb|ABQ79284.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida F1]
          Length = 446

 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 92/449 (20%), Positives = 165/449 (36%), Gaps = 68/449 (15%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L I G  G + WS L P++  V ++G +    N   ++    G ++   V  G  + +G 
Sbjct: 32  LVIAGFGGFLLWSCLAPLDAGVVATGTVKVTSNRKAVQHLSGGTVEAIMVREGDVVKKGQ 91

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
                   E   L  L+ V+          E+ AL   + +Y ++ K  E+R E   D  
Sbjct: 92  --------EVVRLDALRAVA----------EQGAL---SAQY-IVSKTVENRLEAERD-- 127

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           G+   T         ++  R L     + R +   R  L  + S+L   L++    L  +
Sbjct: 128 GRDTVTFDPALLEHYANDPRLLAAMDLQQRLLDTRRAGLAGELSILEENLTASAVQLKGL 187

Query: 203 KNLFEKNAVSQNDLNQQ---ERIVY--------------KSTLELRENIHEQKNMLRHIN 245
           + ++   A     LNQ+    R++               +S  +L     E  N +    
Sbjct: 188 QQVYGARASQIGFLNQELQGTRVLAAEGYVPRNRLLELERSNADLSAGQAENLNNIARAR 247

Query: 246 ELYDEANLEFA----NYLKEISRDLEQNQR---TFADEMSKLTILEKTREQKTILSPIAG 298
               E  L       +YLKE+   L    +   T AD   +L  L+       I SPI G
Sbjct: 248 SQATEIKLRILQRQHDYLKEVESQLTDTAKENTTLAD---RLRALDYEVTHTVIRSPIDG 304

Query: 299 TIVYNQSFSSSNYAQQSQP---LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +   Q  S +      QP   +M++VP  +   + A +  + I  +  G    + FP +
Sbjct: 305 MV---QGLSIATVGGIIQPGAKIMEVVPLDQPLQVDAMIPVQAIDKMVPGLAVDIAFPAF 361

Query: 356 ADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLA---FSDNNIELRNGFP 410
              +       ++ I  D ++ ++      Q +Y   +++T         N+I  R G P
Sbjct: 362 NHAQTPNIPGRVKTISADRLLDEESK----QPFYLAQVEVTPAGMGLLGSNHI--RPGMP 415

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           A V        L   ++ P+ +     F+
Sbjct: 416 ATVTIKTGERNLLSYLLKPMLERVDAAFK 444


>gi|320327894|gb|EFW83899.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 445

 Score = 43.9 bits (102), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 77/428 (17%), Positives = 156/428 (36%), Gaps = 35/428 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L + G      W+ L P++  ++  G ++       ++S   G++ K  V  G  + +G
Sbjct: 27  ILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQSVKEG 86

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLD 140
            PL   +  +        +  +++LR       ++L    ++ D L++  F +  E +  
Sbjct: 87  EPLFRLDQTQV-------EADVQSLRAQYRMAWASLARWQSERDNLDEVHFPA--ELIAA 137

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALL 192
             G+       +   G   ++ S +  L R +S          L    +    S L A  
Sbjct: 138 GQGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQA 197

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S +K L+ ++ L +   +  N L + +  + +    L +N  E   + + I E      
Sbjct: 198 DSLRKQLSNLEPLAQNGFIPGNRLLEFQSQLSQVQQSLAQNAGETGRIEQGIVESRLRLQ 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE-------QKTILSPIAGTIVYNQS 305
            +   Y KE+       +  +AD   K   LE+             IL+P  G  V    
Sbjct: 258 QQREEYQKEV-------RSQWADAQVKALTLEQQLASAGFSLLHSAILAPADGIAVNLGV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + L++IVP      ++ ++  + I  V       + F  +   R  +   
Sbjct: 311 HTEGAVVRAGETLLEIVPQGTRLEVKGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVSG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     Q  +    Q YY +   + D      N + ++ G PAE+       +L  
Sbjct: 371 EVNLIS--ADQMQDEKTGQPYYVLRTSVGDAVLEKLNGLVIKPGMPAEMFVRTGERSLLN 428

Query: 425 EIIHPITD 432
            +  P+ D
Sbjct: 429 YLFKPLLD 436


>gi|29421528|gb|AAO73504.1| RsaE [Caulobacter vibrioides]
          Length = 419

 Score = 43.9 bits (102), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 36/175 (20%), Positives = 68/175 (38%), Gaps = 17/175 (9%)

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           + +E+S+ + + +   A+   K  +    + +  I+SP+ GT    + F+     + ++P
Sbjct: 253 FFEEVSQSISETRVRLAEVTEKELVASDAQRRIKIVSPVNGTAQNLRFFTDGAVVRPAEP 312

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP----I 373
           L+ I P      I+A   P  + +V  G    VR P +   +           DP    I
Sbjct: 313 LVDIAPEDDAFVIQAHFQPTDVDNVHGGMVTEVRLPAFHSAKNP---------DPNRHDI 363

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN----GFPAEVLFTAKNTTLAQ 424
           ++ +D     Q    + L I  +         R     G PA+V+      T+ Q
Sbjct: 364 VAVRDRITDPQGQVPIFLGIVRVDVKQLPPHFRGKVTAGMPAQVIVPTGERTVLQ 418


>gi|26989279|ref|NP_744704.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida KT2440]
 gi|24984127|gb|AAN68168.1|AE016448_6 metalloprotease secretion protein [Pseudomonas putida KT2440]
          Length = 446

 Score = 43.9 bits (102), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 92/449 (20%), Positives = 165/449 (36%), Gaps = 68/449 (15%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L I G  G + WS L P++  V ++G +    N   ++    G ++   V  G  + +G 
Sbjct: 32  LVIAGFGGFLLWSCLAPLDAGVVATGTVKVTSNRKAVQHLSGGTVEAIMVREGDVVKKGQ 91

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
                   E   L  L+ V+          E+ AL   + +Y ++ K  E+R E   D  
Sbjct: 92  --------EVVRLDALRAVA----------EQGAL---SAQY-IVSKTVENRLEAERD-- 127

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           G+   T         ++  R L     + R +   R  L  + S+L   L++    L  +
Sbjct: 128 GRDTVTFDPALLEHYANDPRLLAAMDLQQRLLDTRRAGLAGELSILEENLTASAVQLKGL 187

Query: 203 KNLFEKNAVSQNDLNQQ---ERIVY--------------KSTLELRENIHEQKNMLRHIN 245
           + ++   A     LNQ+    R++               +S  +L     E  N +    
Sbjct: 188 QQVYGARASQIGFLNQELQGTRVLAAEGYVPRNRLLELERSNADLSAGQAENLNNIARAR 247

Query: 246 ELYDEANLEFA----NYLKEISRDLEQNQR---TFADEMSKLTILEKTREQKTILSPIAG 298
               E  L       +YLKE+   L    +   T AD   +L  L+       I SPI G
Sbjct: 248 SQATEIKLRILQRQHDYLKEVESQLTDTAKENTTLAD---RLRALDYEVTHTVIRSPIDG 304

Query: 299 TIVYNQSFSSSNYAQQSQP---LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +   Q  S +      QP   +M++VP  +   + A +  + I  +  G    + FP +
Sbjct: 305 MV---QGLSIATVGGIIQPGAKIMEVVPLDQPLQVDAMIPVQAIDKMVPGLAVDIAFPAF 361

Query: 356 ADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLA---FSDNNIELRNGFP 410
              +       ++ I  D ++ ++      Q +Y   +++T         N+I  R G P
Sbjct: 362 NHAQTPNIPGRVKTISADRLLDEESK----QPFYLAQVEVTPAGMGLLGSNHI--RPGMP 415

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           A V        L   ++ P+ +     F+
Sbjct: 416 ATVTIKTGERNLLSYLLKPMLERVDAAFK 444


>gi|254227426|ref|ZP_04920858.1| Membrane-fusion protein [Vibrio sp. Ex25]
 gi|262396308|ref|YP_003288161.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio sp. Ex25]
 gi|151940038|gb|EDN58864.1| Membrane-fusion protein [Vibrio sp. Ex25]
 gi|262339902|gb|ACY53696.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio sp. Ex25]
          Length = 463

 Score = 43.5 bits (101), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 96/454 (21%), Positives = 178/454 (39%), Gaps = 62/454 (13%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + ++  I  I W+    I+      G+++    +  +++   G++K+  
Sbjct: 27  NTPNSARLMLWVMVLFFIAAIGWASWAEIDQVTVGQGKVIPSSQIQVVQNLEGGLVKEIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +G  LL  +D         ++  + NL   +    ++++ +    D   K  
Sbjct: 87  VKEGQLVEKGQQLLLIDDTRFRSDFREREQQVANLTASVLQLSASINSVAVNRDF--KTE 144

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRLD-LENKSSLL- 188
             R+  +LD+ GK                    + KLT R ++ Y   LD L N+ S++ 
Sbjct: 145 NWRQSVVLDY-GKLT----------FPPTLEETQPKLTQRQKAEYREDLDNLRNQLSVID 193

Query: 189 -----------------RALLSSHQ---KDLTMMKNLFEKNAVS-------QNDLNQQER 221
                            R L  S+Q   K+L + K L ++  V        Q  +N   R
Sbjct: 194 QQVQQKQQDLVEIEARVRNLRQSYQYAKKELDITKPLADEGVVPRIELLKLQRQVNDTRR 253

Query: 222 IVYKSTLE---LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  S L+   L+  I E  +ML  I+       L+F +  +E    L   Q   +  + 
Sbjct: 254 EMTSSELKIPVLKSAIRE--SMLNRID-----VALKFRSEQQE---KLNSAQDQLSALVE 303

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               LE    +  + SP+ G I      +     Q    +++IVP      + AK+ PK 
Sbjct: 304 SAVGLEDRVNRTVVNSPVTGKIKTLNINTVGGVIQPGMDIVEIVPTEDTLLVEAKIAPKD 363

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  ++    A V+F  Y   +    +  +E I    +Q +   +   +Y V ++     F
Sbjct: 364 IAFLRPDLHAIVKFTAYDFTKYGGLEGELEHISADTTQDE---EGNSFYIVRVRTDKTNF 420

Query: 399 S-DNNIELRNGFPAEV-LFTAKNTTLAQEIIHPI 430
             D ++ +  G  A V + T K T L + ++ PI
Sbjct: 421 GQDADLPIIPGMTASVDIITGKRTVL-EYLLKPI 453


>gi|167584379|ref|ZP_02376767.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ubonensis Bu]
          Length = 474

 Score = 43.5 bits (101), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 77/383 (20%), Positives = 142/383 (37%), Gaps = 53/383 (13%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W+    ++      G+++    V  +++   GI+ +  V  G  + +G PL+  +D  
Sbjct: 72  LAWAAFAEVDEVTVGEGKVIPSSRVQVVQNLEGGIVSEIMVRVGQVVQKGQPLMRIDDTR 131

Query: 92  TTDLI---DLKKVSIKNLRCHIDTEKSALDFLN---------NKYDVLEKAFESREEQLL 139
            T        K  ++      +  E +   F+             D     FESR+ +L 
Sbjct: 132 FTSSYKEGQAKDAALLARIARLTAEANGAAFVAPDRLAQTSPGLLDEERSLFESRQRELQ 191

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH---Q 196
             L        +                         +R +L  K S    L  S+    
Sbjct: 192 SNLDVLRQQAEQ-------------------------HRQELAEKRSRQAQLQHSYGLVA 226

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLEL-RENIHEQKNMLRHINELYDEANL 253
           K+L +   L +K AVS  ++ + ER     K  L+  R  +   +   R   +  DE   
Sbjct: 227 KELALTSPLVQKGAVSDVEVLRLERQANDMKGDLDATRLAMPRLEAAYREARQKIDETTA 286

Query: 254 EF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVYNQSFSSSNY 311
            F A+ +KE++       R     +S   +  + R  +T++ +P+ G +   +  +    
Sbjct: 287 HFRADAMKELN-----QARAEQSALSAANVALEDRVTRTLVRAPLKGMVKQIKINTVGGV 341

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI- 370
            Q    L++IVP      I A+V P  I  +  G  ATV+   Y       F A++E I 
Sbjct: 342 IQPGMDLLEIVPLDDTLLIEARVRPSDIAFLHPGQDATVKLSAYDFSIYGGFPAVVEDIS 401

Query: 371 -DPIISQQDNNLQTQEYYEVILK 392
            D I+  +    +   YY V+++
Sbjct: 402 ADTIVPDRPGE-KPDSYYRVLVR 423


>gi|299069456|emb|CBJ40723.1| putative cation transporter transmembrane protein [Ralstonia
           solanacearum CMR15]
          Length = 382

 Score = 43.5 bits (101), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 15/123 (12%)

Query: 264 RDLEQNQRTFADEMSKL--------TILEKTREQKT------ILSPIAGTIVYNQSFSSS 309
           RDLEQ Q  +A  +S+          +  K   Q T      + SPI G +V   +    
Sbjct: 163 RDLEQAQNDYAQAVSEADRANNRLAQLGAKGGGQVTGGHILAVRSPITGRVVDLNAAIGG 222

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            +   + P+M +   S++ ++ A    K +  V  G +ATV+   YAD    K + + E 
Sbjct: 223 YWNDATAPVMTVADLSRV-FVTASAQEKDLAQVYAGQSATVKLDAYADALPAKVRFVGEM 281

Query: 370 IDP 372
           +DP
Sbjct: 282 LDP 284


>gi|163740033|ref|ZP_02147437.1| putative toxin secretion transmembrane protein [Phaeobacter
           gallaeciensis BS107]
 gi|161386664|gb|EDQ11029.1| putative toxin secretion transmembrane protein [Phaeobacter
           gallaeciensis BS107]
          Length = 467

 Score = 43.5 bits (101), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 83/443 (18%), Positives = 175/443 (39%), Gaps = 42/443 (9%)

Query: 9   LKRNHPASLKRMTLLSII---GIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           L R  P  ++++ +  ++   G+ G L+ W+    +  +V + G+     + + ++    
Sbjct: 33  LPRTPPTRVRQLVMWMLVCGFGLFGGLVFWATKAEMTSAVVAPGQFTVAGDRLSVQHLEG 92

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTE-------- 113
           GI+++  V  G  + +G  +   +      +  ++  +  S+   +  +  E        
Sbjct: 93  GIVREINVAEGDMVAEGDVIAVLDGRRMRASRAILTSQMASLLAQQARLQAELAEADQIE 152

Query: 114 -KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             + LD L  +   L   FE + +        Y     ++    IS + + L  +  R+ 
Sbjct: 153 VPAELDQLIAEDPQLVSLFEVQRDVFTSNRALYEGQV-QILRDRISQLGKQLNGRQARIT 211

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN--QQERIVYKSTLEL 230
           +I       E++ +L++  ++   K       L+EK  V +  L+  Q +      T   
Sbjct: 212 AI-------EDQLTLIKGEVADLHK-------LYEKGLVPKTRLSDRQLQHTGLMGTFGA 257

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            E+  + +N+   I E  +       + +  IS + +  Q    D   +L   E   E++
Sbjct: 258 LES--DSENLQERIAETEERILQVHRDTVNRISSETQLVQERILDLRQRLDAAEDVLERQ 315

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           TIL+P AG +V     +        Q ++++VP      +  +V+P  I  V  G  A V
Sbjct: 316 TILAPRAGRVVELSINTLGQVLNPGQNVLELVPSGSDLIVETRVSPTDIDEVVTGGQARV 375

Query: 351 RFPHYA--DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRN 407
           +   Y+       + + ++   D I    D N     YY V ++I     +   N++   
Sbjct: 376 QLTAYSFRSTPPVRGEVVMVAADSI---ADLN-SGIPYYRVHIRIPPEELAALPNVKTLP 431

Query: 408 GFPAEVLFTAKNTTLAQEIIHPI 430
           G PA+ +      TLA  ++ P+
Sbjct: 432 GMPAQAMIETGRQTLADYLLSPV 454


>gi|17548661|ref|NP_522001.1| putative multidrug resistance transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17430909|emb|CAD17591.1| putative multidrug resistance homolog transmembrane protein
           [Ralstonia solanacearum GMI1000]
          Length = 363

 Score = 43.5 bits (101), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 6/125 (4%)

Query: 249 DEANLEFANYLKEISR-DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
           D A L  A     I R DLE+ + +     ++    E       +++P++G +V  +S  
Sbjct: 170 DLAGLHSAEQQTAILRADLEKARASLLSAQAEKATAELNLSYARVIAPVSG-VVAQRSAR 228

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              YA+  QPL+ +VP   + Y+ A     Q+ HV+ G  AT+      ++R    K  +
Sbjct: 229 VGGYARVGQPLLTLVPLDAV-YVEANFRETQLAHVRVGQPATITVDALPNVR---LKGRV 284

Query: 368 EKIDP 372
           E + P
Sbjct: 285 ESLGP 289


>gi|299133995|ref|ZP_07027188.1| type I secretion membrane fusion protein, HlyD family [Afipia sp.
           1NLS2]
 gi|298590742|gb|EFI50944.1| type I secretion membrane fusion protein, HlyD family [Afipia sp.
           1NLS2]
          Length = 431

 Score = 43.5 bits (101), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 74/348 (21%), Positives = 146/348 (41%), Gaps = 37/348 (10%)

Query: 20  MTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQ 77
           M   +II + G+ + W+ L  ++I   + G+++  +   +I  PF +G+++   + +GS 
Sbjct: 1   MLGAAIIALFGVALLWASLGTVDIVAVAPGKVI-PNGRTKIIQPFEAGVVRAIHIHDGST 59

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE--KSALDFLNNKYDVLEKAFESRE 135
           +  G  L+  +   T +  D+K + I  +   +D    ++AL   +N  D      ++ +
Sbjct: 60  VKAGDVLIELD--PTINAADVKHMEIDLIAAELDVARLRAALANHDNPADSFTPPQDATK 117

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E L++   +Y  + ++     I+ + R +  K     +I  N   LE    LL       
Sbjct: 118 E-LVETQRQYLISQTQEHRAKIAEIGRQIAQKRAERDTIAANIAKLEATIPLL------- 169

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            ++ T M+    +N +         +I Y S  EL++ + +Q   L   +    EA+   
Sbjct: 170 -EERTKMREYLYENKLG-------SKITYLS--ELQDLVGQQHETLVQKSR-EQEADAAI 218

Query: 256 ANYLKEISRDLEQNQRTFADEMSKL----------TILEKTREQKTIL-SPIAGTIVYNQ 304
           A   +  +R   + +RT  D++SK            I  K + +  IL +PI G +    
Sbjct: 219 AALDETQTRAKAEYRRTLLDDLSKAEQKAGGLRQDVIKAKQKAKLQILTAPIDGVVQQLA 278

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
             +       +Q +  IV       I A V+ + I  V  G TA ++ 
Sbjct: 279 VHTIGGVVTPAQSIAVIVATDGGVEIEAMVSNRDIGFVFPGQTAEIKV 326


>gi|317047648|ref|YP_004115296.1| HlyD family type I secretion membrane fusion protein [Pantoea sp.
           At-9b]
 gi|316949265|gb|ADU68740.1| type I secretion membrane fusion protein, HlyD family [Pantoea sp.
           At-9b]
          Length = 410

 Score = 43.5 bits (101), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 99/248 (39%), Gaps = 16/248 (6%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R LL      LT    L EK       L ++  I     L LR     Q N LR   ++ 
Sbjct: 163 RKLLDESISSLTHNLQLAEKEVNLSEPLAKRGLISDMEILRLRR----QANDLR--VQIA 216

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D  N     Y  + + +L + +  FA   ++L   +       I +P+ GTI   ++ + 
Sbjct: 217 DRTN----KYRSDANSELTRLESEFAQVEARLVGRKDVINHALITAPVKGTINSIKNTTI 272

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +   + + +M ++P      +  ++ P ++  ++ G  ATV+   Y          +IE
Sbjct: 273 DSVISRGEQIMSLIPSEDNLLLETRIKPAEVAFLRPGLPATVKISAYDFAIYGGLHGVIE 332

Query: 369 KIDP--II--SQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
            I P  II  ++  +  +   YY V ++   TDL   D +  +  G  A V       T+
Sbjct: 333 SISPDTIIDETKMRSGREDATYYRVYVRTHGTDLHVKDKSFPIIPGMTASVEIKTGEKTI 392

Query: 423 AQEIIHPI 430
              ++ P+
Sbjct: 393 LSYLLKPV 400


>gi|298565983|dbj|BAJ09611.1| membrane fusion protein [Pasteurella pneumotropica]
          Length = 325

 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 53/261 (20%), Positives = 107/261 (40%), Gaps = 33/261 (12%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +ALL    K++ + + + +K  VSQ +L + +R     + +  + I E++N         
Sbjct: 89  KALLD---KEIAITQPMVKKGVVSQVELLRMQR----QSSDFAQQITERRN--------- 132

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  + + +L Q +   A     + +     E+  I +P+ G +   +  + 
Sbjct: 133 --------RYSADANNELVQTESELAQARENMAMRADPVERSQIKAPLRGVVKNIRINTV 184

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q  Q +++IVP      ++A ++PK +  ++ G  A V+   Y        +  + 
Sbjct: 185 GGVVQAGQDILEIVPLDDTLLVQAYISPKDVAFIRPGQPALVKISAYDYSIYGGLEGKVT 244

Query: 369 KIDPIISQQDN-----NLQT-QEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKN 419
            I P   Q +      NL   Q YY ++++    + +D+    +++  G  A V      
Sbjct: 245 LISPDTLQDERRRSELNLNADQAYYRILIETQGTSITDSKGQKLDITPGMTATVDIKTGE 304

Query: 420 TTLAQEIIHPITDNWPKIFER 440
            T+ Q +I PIT     + ER
Sbjct: 305 KTVFQYLIKPITRMKQALQER 325


>gi|290474145|ref|YP_003467022.1| RTX toxin ABC transporter protein (MFP) RtxD [Xenorhabdus bovienii
           SS-2004]
 gi|289173455|emb|CBJ80234.1| RTX toxin ABC transporter protein (MFP) RtxD [Xenorhabdus bovienii
           SS-2004]
          Length = 451

 Score = 43.5 bits (101), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 82/371 (22%), Positives = 160/371 (43%), Gaps = 56/371 (15%)

Query: 9   LKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L +  P+   R T +++ IG++ ++ W+ L  +++  +++G ++       I++     +
Sbjct: 29  LSQRPPSPFARYTAITLSIGVLVVLLWAYLGKLDVQATATGRLIASGRSQVIQAYEQSRL 88

Query: 68  KKFQVENGSQILQGTPLLTFEDI----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
               ++NG  I +  PLL    +    + T L++ ++  I+        EK     L  K
Sbjct: 89  LSIHIQNGQHIEKNAPLLMLNTLGVNQDVTRLLEQREYLIE--------EKIRYQALLGK 140

Query: 124 YD-----VLEKAFESREEQLLDFLGKYHSTCSK-VFNYGISSVYRSLKMKLTRMRSIYLN 177
           +D     + ++   S++E++     + H    K  F+  I+++Y  + + L+  ++    
Sbjct: 141 HDPESLPLFQQQTLSQQEKI-----QTHYEHEKHEFDAIITNLYAEMNVNLSSQKA---- 191

Query: 178 RLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                 K+  ++AL +  Q   + L   K L +K  +S+ +  +QE    K  LE    I
Sbjct: 192 ------KNGDIQALTNLRQNINQRLQARKILSQKQVISRVEYLEQE----KELLETERVI 241

Query: 235 HEQKNMLRHINELYD--EANLEFANYLKEIS-----RDLEQNQRTFADEMSKLTILEKTR 287
            +QK  L  +   Y   E  L+  N  KE       +  E        E+SK+    + R
Sbjct: 242 TQQKAELGILMTQYKSLEERLKGINMQKEREWFEKKKQAEMQLGVLKQELSKM----QER 297

Query: 288 EQKTIL-SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           E   I+ SP+AGT+      +     Q +Q LM IVP   +     ++  K +  V+ G 
Sbjct: 298 EALEIVRSPVAGTVQQLSVHTLGAVLQPAQNLMVIVPDDHVQLAEIQILNKDVGFVRPGQ 357

Query: 347 TATVR---FPH 354
             TV+   FP+
Sbjct: 358 HVTVKVDAFPY 368


>gi|17549262|ref|NP_522602.1| cation transporter transmembrane protein [Ralstonia solanacearum
           GMI1000]
 gi|17431514|emb|CAD18192.1| probable cation transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
          Length = 382

 Score = 43.5 bits (101), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 15/123 (12%)

Query: 264 RDLEQNQRTFADEMSKLT--------ILEKTREQKT------ILSPIAGTIVYNQSFSSS 309
           RDLEQ Q  +A  +S+          +  K   Q T      + SPI G +V   +    
Sbjct: 163 RDLEQAQNDYAQAVSEADRANNRLAQLGAKGGTQVTGGHILAVRSPITGRVVDLNAAIGG 222

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            +   + P+M +   S++ ++ A    K +  V  G +ATV+   YAD    K + + E 
Sbjct: 223 YWNDATAPVMTVADLSRV-FVTASAQEKDLAQVYAGQSATVKLDAYADALPAKVRFVGEM 281

Query: 370 IDP 372
           +DP
Sbjct: 282 LDP 284


>gi|169796515|ref|YP_001714308.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter baumannii AYE]
 gi|184157552|ref|YP_001845891.1| membrane-fusion protein [Acinetobacter baumannii ACICU]
 gi|213156372|ref|YP_002318792.1| membrane spanning export protein [Acinetobacter baumannii AB0057]
 gi|215483978|ref|YP_002326203.1| Leukotoxin secretion protein D [Acinetobacter baumannii AB307-0294]
 gi|239503722|ref|ZP_04663032.1| Leukotoxin secretion protein D [Acinetobacter baumannii AB900]
 gi|260555578|ref|ZP_05827799.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter baumannii ATCC 19606]
 gi|301347262|ref|ZP_07228003.1| Leukotoxin secretion protein D [Acinetobacter baumannii AB056]
 gi|301594405|ref|ZP_07239413.1| Leukotoxin secretion protein D [Acinetobacter baumannii AB059]
 gi|332853953|ref|ZP_08435073.1| type I secretion membrane fusion protein, HlyD family
           [Acinetobacter baumannii 6013150]
 gi|332870209|ref|ZP_08439104.1| type I secretion membrane fusion protein, HlyD family
           [Acinetobacter baumannii 6013113]
 gi|332874286|ref|ZP_08442205.1| type I secretion membrane fusion protein, HlyD family
           [Acinetobacter baumannii 6014059]
 gi|88758834|emb|CAJ77851.1| putative RND family drug transporter [Acinetobacter baumannii AYE]
 gi|169149442|emb|CAM87328.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           (superfamily ABC, membrane) [Acinetobacter baumannii
           AYE]
 gi|183209146|gb|ACC56544.1| Membrane-fusion protein [Acinetobacter baumannii ACICU]
 gi|193076938|gb|ABO11671.2| putative RND family drug transporter [Acinetobacter baumannii ATCC
           17978]
 gi|213055532|gb|ACJ40434.1| membrane spanning export protein [Acinetobacter baumannii AB0057]
 gi|213988210|gb|ACJ58509.1| Leukotoxin secretion protein D [Acinetobacter baumannii AB307-0294]
 gi|260412120|gb|EEX05417.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter baumannii ATCC 19606]
 gi|322507866|gb|ADX03320.1| putative protein secretion efflux system, membrane fusion protein
           [Acinetobacter baumannii 1656-2]
 gi|323517463|gb|ADX91844.1| membrane-fusion protein [Acinetobacter baumannii TCDC-AB0715]
 gi|332728309|gb|EGJ59690.1| type I secretion membrane fusion protein, HlyD family
           [Acinetobacter baumannii 6013150]
 gi|332732376|gb|EGJ63633.1| type I secretion membrane fusion protein, HlyD family
           [Acinetobacter baumannii 6013113]
 gi|332737511|gb|EGJ68419.1| type I secretion membrane fusion protein, HlyD family
           [Acinetobacter baumannii 6014059]
          Length = 396

 Score = 43.5 bits (101), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 26/217 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R DLE   S LR  L   Q++L M + L  K A S+ ++           L LR   ++ 
Sbjct: 153 RADLEQTLSGLRQALQLVQQELAMTEPLVAKGAASEVEV-----------LRLRREANDL 201

Query: 238 KNMLRHI-NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SP 295
           +N +    N+ Y +A  E    L + + D +  Q+        L        Q+ +  +P
Sbjct: 202 QNKMNDARNQYYVKAREE----LSKANTDTQTQQQVVMGRNDSL--------QRAVFKAP 249

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +      +      Q+  LM IVP  +   I A++ P+ I  ++ G  A V+   Y
Sbjct: 250 VRGVVKEITVTTHGGVIPQNGKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKITAY 309

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
                   K  +  I P  + +D   Q Q YY V ++
Sbjct: 310 DYSIYGGLKGKVTVISP-DTIRDEVKQDQFYYRVYIR 345


>gi|119510890|ref|ZP_01630013.1| hypothetical protein N9414_20410 [Nodularia spumigena CCY9414]
 gi|119464418|gb|EAW45332.1| hypothetical protein N9414_20410 [Nodularia spumigena CCY9414]
          Length = 517

 Score = 43.5 bits (101), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 80/387 (20%), Positives = 148/387 (38%), Gaps = 58/387 (14%)

Query: 14  PASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P    R  L  ++G   L + W+    ++ + S+ G I  +    ++ S   G +K  +V
Sbjct: 57  PKVWTRGVLYVLVGFASLALPWATFAKVDETGSARGRIEPQGATQKLDSQAQGSVKAVKV 116

Query: 73  ENGSQILQGTPLLTFE-DIETTDL--IDLKKVSIKNLRCHIDTEKSALDFL------NNK 123
             G  + QG  L+  + DI  T++   + K  +++N     +  KS L          N+
Sbjct: 117 TEGDTVTQGQVLVELDSDILQTEVQQAEAKLSALQNQETQFEVLKSQLQLTLSIQKQQNQ 176

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +  LEK   S+  Q    LG   +T      Y +  + R     L       +   + E 
Sbjct: 177 FQALEKM--SQVNQAQQNLGLKETT------YNLQKLER---QALVNQVQQQIQTAEDEQ 225

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ------------------------- 218
            S+  R  + S Q  +   + L    AVS N ++Q                         
Sbjct: 226 VSAEGRLSIDSRQ--VNRFQQLVNDGAVSANQVDQLKKEEQDSKRLYARAKSDVKQAKLR 283

Query: 219 --QERIVYKSTL-ELRENIHEQKNMLRHINELYDE-------ANLEFANYLKEISRDLEQ 268
             +E   Y++T+ +L+ +I + K+ L+     Y         A L++   LKE+ R +  
Sbjct: 284 LAEETSRYEATMNQLQSDIKQAKHQLQAEKNSYQSLLQAGKLAVLKYQEQLKELERQVAN 343

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +   A   SK+T L+   +Q+ + SP+ GTI            Q  Q +  I P +   
Sbjct: 344 LKAEIAQTKSKITSLKLQMQQRVVRSPVDGTIFDLPVTKPGEVVQVGQRIADIAPENTKI 403

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHY 355
            ++A +  +    +  G    ++F  +
Sbjct: 404 VLKANMPIQDSGFLNVGMPVKIKFDAF 430


>gi|91223017|ref|ZP_01258283.1| secretion protein, HlyD family [Vibrio alginolyticus 12G01]
 gi|269965026|ref|ZP_06179191.1| secretion protein, HlyD family [Vibrio alginolyticus 40B]
 gi|91191830|gb|EAS78093.1| secretion protein, HlyD family [Vibrio alginolyticus 12G01]
 gi|269830329|gb|EEZ84554.1| secretion protein, HlyD family [Vibrio alginolyticus 40B]
          Length = 463

 Score = 43.5 bits (101), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 96/457 (21%), Positives = 181/457 (39%), Gaps = 68/457 (14%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + ++  I  I W+    I+      G+++    +  +++   G++K+  
Sbjct: 27  NTPNSARFMLWVMVLFFIAAIGWASWAEIDKVTVGQGKVIPSSQIQVVQNLEGGLVKEIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +G  LL  +D         ++  + NL   +    ++++ +      + + F
Sbjct: 87  VKEGQLVEKGQQLLLIDDTRFRSDFREREQQVANLTASVLQLSASINSV-----AVNRDF 141

Query: 132 ES---REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRLD-LENKSS 186
           E+   R+  LLD+ GK                    + +LT R ++ Y   LD L N+ S
Sbjct: 142 ETENWRQSVLLDY-GKLT----------FPPTLEETRPQLTQRQKAEYREDLDNLRNQLS 190

Query: 187 LL------------------RALLSSHQ---KDLTMMKNLFEKNAVS-------QNDLNQ 218
           ++                  R L  S+Q   K+L + K L ++  V        Q  +N 
Sbjct: 191 VIDQQVQQKQQDLVEIQARVRNLRQSYQYAKKELDITKPLADEGVVPRIELLKLQRQVND 250

Query: 219 QERIVYKSTLE---LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
             R +  S L+   L+  I E  +ML  I+       L+F +  +E    L   Q   + 
Sbjct: 251 TRREMTSSELKIPVLQSAIRE--SMLNRID-----VALKFRSEQQE---KLNSAQDQLSA 300

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            +     LE    +  + SP+ G I      +     Q    +++IVP      + AK+ 
Sbjct: 301 LVESAVGLEDRVNRTVVNSPVTGKIKTLNINTVGGVIQPGMDIVEIVPTEDTLLVEAKIA 360

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           PK I  ++    A V+F  Y   +    +  +E I    +Q +   +   +Y V ++   
Sbjct: 361 PKDIAFLRPDLHAIVKFTAYDFTKYGGLEGELEHISADTTQDE---EGNSFYIVRVRTEK 417

Query: 396 LAFS-DNNIELRNGFPAEV-LFTAKNTTLAQEIIHPI 430
             F  D ++ +  G  A V + T K T L + ++ PI
Sbjct: 418 TNFGQDADLPIIPGMTASVDIITGKRTVL-EYLLKPI 453


>gi|313682324|ref|YP_004060062.1| type i secretion membrane fusion protein, hlyd family
           [Sulfuricurvum kujiense DSM 16994]
 gi|313155184|gb|ADR33862.1| type I secretion membrane fusion protein, HlyD family
           [Sulfuricurvum kujiense DSM 16994]
          Length = 437

 Score = 43.5 bits (101), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 75/354 (21%), Positives = 150/354 (42%), Gaps = 36/354 (10%)

Query: 14  PAS-LKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           P S L R  L S+   + + + W  L  I++ VS+ G+++ +  +  ++   +G+I    
Sbjct: 23  PTSPLGRSLLWSLFAFLTISLLWLFLAKIDVVVSARGKVVPDGEIKTLQPVETGVIGSIL 82

Query: 72  VENGSQILQGTPLLTFE-DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           V+ G  + +G  L+  +  +  +DL   +K    NL   ++ E   LD   N     ++A
Sbjct: 83  VKEGQSVKKGEVLMEIDPSVTQSDLASKQK----NLTL-LELEIERLDAQIN-----DRA 132

Query: 131 FE-SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS---- 185
           F  SR+ Q         ST           +Y S K+   + R +   ++   +++    
Sbjct: 133 FHPSRKCQ--------ESTAIATQQM----MYTSGKLAYDQQRQVLQEQIRQNDEATEAA 180

Query: 186 ----SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
               S L+ LL+S ++    +K + +  A  +    Q +RI Y+  L ++E+   Q    
Sbjct: 181 KADKSRLKQLLTSAKEHEARLKEVLDIIAKKEYIDAQNQRIEYQEQLTMKEHAIAQSQ-- 238

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             +NEL  +  L    Y  ++  DL Q  +      +++   +    ++ I++P+ GTI 
Sbjct: 239 GKLNELNQQLRLVTQEYRNKLLADLTQKSKEATSLRTEVETTQFRNAKQQIIAPVDGTIG 298

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
                +       ++ L+ ++P      I+A V  + I  V K   A V+   +
Sbjct: 299 KLLVHTVGGVVTPAEKLLTVIPKGVPLIIKATVLNQDIGFVTKEMEAAVKIDTF 352


>gi|116696247|ref|YP_841823.1| RTX toxin membrane fusion protein [Ralstonia eutropha H16]
 gi|113530746|emb|CAJ97093.1| RTX toxin membrane fusion protein [Ralstonia eutropha H16]
          Length = 445

 Score = 43.5 bits (101), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 82/417 (19%), Positives = 175/417 (41%), Gaps = 47/417 (11%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            +    PA + R+   SI G+  L + ++ +  +++ VS+ G+++       ++   +GI
Sbjct: 22  GIANRRPARMARIVAGSICGMAVLALVYATMAKMDVVVSAQGKVIPSGKSKVVQPLEAGI 81

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETT-DLIDLKK------VSIKNLRCHIDTEKSALDF 119
           +++  V +G ++  G  L+  +   T  D   L++        ++ L   +D + +    
Sbjct: 82  VREIHVRDGEKVKAGDILVELDPTTTAADRDRLQRDQWEAVAGVRRLTALLDGKPTMQAV 141

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNR 178
                D+      +R +Q L                 ++S     + +L  + + I   R
Sbjct: 142 EGLPADI------ARTQQAL-----------------LTSALAEQRARLAALDAEIARKR 178

Query: 179 LDLENKSSLL---RALLSSHQKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLELREN 233
            D E  ++ L   RA L    K   M + L +   +++  L   + E I  +  L L+ N
Sbjct: 179 ADREGAAASLEQIRASLPLVSKKNDMREELVKTGHIAETGLIETRLELINLRKELALQTN 238

Query: 234 -IHEQKNMLRHINELYDEANLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            + E    L    +   +A  EF A +  E++   E+++++   E+ +L      R+ +T
Sbjct: 239 RLAEAGAGLNAAQQQRAQAVAEFSARHAAELA---EESRKSATAEL-ELVKATMRRDLQT 294

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +PI G +      +      Q+QP+  +VP +    + A+V  K I +VK+G     +
Sbjct: 295 LRAPIDGIVQQLAVTTVGGVVTQAQPVAIVVPENTALEVDAQVQNKDIGYVKRGQRVITK 354

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
              +   R   F  I  ++  + +   N+ +    Y V +K+  +A + N++  R G
Sbjct: 355 VETFDFTR---FGYIEGEVQWVGTDAINDQKLGPIYPVRIKLDTMA-TPNSVNGRKG 407


>gi|209963700|ref|YP_002296615.1| HlyD family secretion protein [Rhodospirillum centenum SW]
 gi|209957166|gb|ACI97802.1| HlyD family secretion protein [Rhodospirillum centenum SW]
          Length = 453

 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 81/447 (18%), Positives = 178/447 (39%), Gaps = 61/447 (13%)

Query: 14  PASLKRMTL--LSIIGII--GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           P S K + +  L ++GI   G+ TW+ + P+  +  ++G +    N   I+    GI+K+
Sbjct: 27  PTSFKGVAISGLLLLGITFGGVGTWAAVAPLSSAAIATGVLTVASNNKMIQHLEGGIVKE 86

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDV 126
            +V+ G  +  G  L+  +       +D+ +  +     L   +  E+S  D +     +
Sbjct: 87  IRVKEGDMVAAGATLVVLDPTRAEAQVDIVRGQLDATLALEARLLAERSGADAVRFPDSL 146

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           ++   +     ++D       +  K+F     +   SL+ ++T +R   +       +  
Sbjct: 147 VKNTSDPDVAAIID-------SQKKLFE----ARRLSLEGQVTILRKRIVQ---AREQIG 192

Query: 187 LLRALLSSHQKDLTM-------MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L A   S+ + +T+       ++ L+EK    +  +   ER   +   E  +   E   
Sbjct: 193 GLEAQRDSNDRQITLIEDELKGLRELYEKGYAPRTRILALEREASRLLGERGQYGGE--- 249

Query: 240 MLRHINELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            +  + ++  E  L+      N+ +E+++ L++ Q    D   +L   E    +  I SP
Sbjct: 250 -VSRVQQVIGETELQIIQVRKNFQEEVAKQLQETQNQIFDLRERLRAAEDVLARTVITSP 308

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            AG +   +  +          +++IVP +    I A++    + +V  G  A V    +
Sbjct: 309 EAGKVTGLKVHTVGGVVPPGDVMLQIVPDNDDLIIEAQLQVTDVDNVHVGQQADVHLTAF 368

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNL-----QTQE----YYEVILKITD---LAFSDNNI 403
           +           ++I P+++    N+     Q Q     YY V + +++   +   D  +
Sbjct: 369 S-----------QRITPVVTGTVENVSGDRFQDQRTGLPYYTVRIVVSEEERVKLGD--L 415

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           +L  G PA+        T  + +  P+
Sbjct: 416 QLLPGMPADAYIKTGEKTPLRYLFDPL 442


>gi|170724842|ref|YP_001758868.1| HlyD family type I secretion membrane fusion protein [Shewanella
           woodyi ATCC 51908]
 gi|169810189|gb|ACA84773.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           woodyi ATCC 51908]
          Length = 460

 Score = 43.5 bits (101), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 79/409 (19%), Positives = 166/409 (40%), Gaps = 58/409 (14%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           ++  +  + P+S  R+ + +++ +    + W+    ++   +  G+++    V  I+S  
Sbjct: 16  VYGAMMTDAPSS-HRLIIWTLVALATCFLIWAFFAELDQVTTGMGKVIPSSQVQIIQSLD 74

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI+++  V+ G  + +G  L+  +D         ++  + +L+ ++   ++ L    N 
Sbjct: 75  GGIMQELYVQEGMIVTKGQALVRIDDTRFRSDFAQQEQEVYSLQANVKRLETEL----NS 130

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LE 182
             + + A + RE+  +       +     F+  ++ +   L   + R +  Y  RLD L 
Sbjct: 131 IVITDMAADWREQVRI-------TKLPLQFSAELAELEPEL---IERQKDEYSGRLDSLS 180

Query: 183 NK------------------SSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQER 221
           N+                  +S +R L  S+Q   ++L++ + L +K  V + +L + ER
Sbjct: 181 NQLEILARQIQQRQQETQELASKIRTLTKSYQLVSRELSLTRPLADKGIVPEVELLKLER 240

Query: 222 IVYKSTLELRENIHEQKNMLR----HINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            V         +I  +   LR     +    DEA L+    +   S +          ++
Sbjct: 241 TV--------NDIQGELATLRLLRPKVKASQDEAILKRREAVFAFSTETRTQLSDLQTKL 292

Query: 278 SKLTILEKTREQKT----ILSPIAGTI--VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           S+++  +   + K     I+SP+ GTI  +Y  +       Q    +++IVP      I 
Sbjct: 293 SRMSEAQVGAQDKVNKAEIVSPVNGTIKSIYINTLG--GVVQPGIDILEIVPSEDQLLIE 350

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
            K+TPK I  +  G  A V+   Y   R       +E I    SQ +  
Sbjct: 351 TKITPKDIAFLHPGLPAVVKVTAYDFTRYGGLNGTVEHISADTSQDEEG 399


>gi|212633288|ref|YP_002309813.1| type I secretion membrane fusion protein, HlyD [Shewanella
           piezotolerans WP3]
 gi|212554772|gb|ACJ27226.1| Type I secretion membrane fusion protein, HlyD [Shewanella
           piezotolerans WP3]
          Length = 460

 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 80/406 (19%), Positives = 165/406 (40%), Gaps = 52/406 (12%)

Query: 5   MWKNLKRNHPASLKRMTL--LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           ++  +  + PAS  R+T+  LS + +  LI W+    ++   +  G+++    +  I+S 
Sbjct: 16  VYGAMMTDAPAS-HRLTIWALSSLAVTFLI-WAYFAELDQVTTGMGKVIPSSQIQVIQSL 73

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN- 121
             GI++   V+ G  + +G PL   +          ++  + +L  ++   K+ L+ +  
Sbjct: 74  DGGILQDMYVQEGLIVTKGQPLARIDATRFQSDFAQQEQEVNSLLANVIRLKTELNSITI 133

Query: 122 --------NKYDVLEKA------FESREEQLL-----DFLGKYHSTCSKVFNYGISSVYR 162
                    +  +L +A       E+ E +L      ++LG+            I ++  
Sbjct: 134 SSIGSDWREQVKILPQALIFPQLLETNEPELTKRQREEYLGR------------IDNLSN 181

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQ 219
            L+++    R I     +++  +S +R L +S Q   ++L + + L +K  V + +L + 
Sbjct: 182 QLEIQ---ARQIQQRNQEIQELASKIRTLTTSFQLVSRELELTRPLADKGIVPEVELLKL 238

Query: 220 ERIVYKSTLELRENIHEQKNMLR-HINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           +R+V     EL         +LR  +    DEA L+    +   + D          ++S
Sbjct: 239 QRVVNDIQGEL-----SSLRLLRPKVKSTMDEAILKRRESVLIFAADARAQLNEMQTKLS 293

Query: 279 KLTILEKTREQKT----ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           ++   +   + K     I+SP+ GTI      +     Q    +++IVP      I  K+
Sbjct: 294 RMNEAQVGAQDKVSKAEIVSPVNGTIKSVHINTLGGVVQPGVDIIEIVPSEDKLLIETKI 353

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
            PK I  +  G  A V+   Y   R      ++E I    +Q +  
Sbjct: 354 VPKDIAFLHPGLPAVVKVTAYDFTRYGGLDGVVEHISADTTQDEEG 399


>gi|325121592|gb|ADY81115.1| putative protein secretion efflux system, membrane fusion
           protein(superfamily ABC, membrane) [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 345

 Score = 43.1 bits (100), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 75/359 (20%), Positives = 140/359 (38%), Gaps = 73/359 (20%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLIT---WSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           N+  + P  L R +L+  I  IGL+    W+ +  +E   + +G+++       I+S   
Sbjct: 15  NVSYSEP-PLPRASLVIWIVGIGLVIFFIWAWVFKLEEVSTGTGKVIPSSKEQVIQSLEG 73

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           GI+ K  V+ G  + +G  L   +         E+  L+   + +   LR  ++   + L
Sbjct: 74  GILTKLNVQEGDIVQKGEILAQLDPTRFASNVGESKSLLISAQATAARLRAEVN--GTPL 131

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            F     +++ K  +  +E+                    +++YRS              
Sbjct: 132 VF----PEIVMKEPKLVQEE--------------------TALYRS-------------R 154

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R DLE   + LR  L   Q++L M + L  K A S+ ++           L LR   ++ 
Sbjct: 155 RADLEQTLAGLRQALQLVQQELAMTEPLVAKGAASEVEV-----------LRLRREANDL 203

Query: 238 KNMLRHI-NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +N +    N+ Y +A  E    L + + D E  Q+        L       ++    +P+
Sbjct: 204 QNKMNDAQNQYYVKAREE----LSKANTDSETQQQIVLGRSDSL-------DRAVFRAPV 252

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            G +      +      Q+  LM IVP  +   I A++ P+ I  ++ G  A V+   Y
Sbjct: 253 RGVVKEIAVTTRGGVVPQNGKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKITAY 311


>gi|34495969|ref|NP_900184.1| HlyD family secretion protein [Chromobacterium violaceum ATCC
           12472]
 gi|34101823|gb|AAQ58191.1| probable HlyD family secretion protein [Chromobacterium violaceum
           ATCC 12472]
          Length = 473

 Score = 43.1 bits (100), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 78/380 (20%), Positives = 160/380 (42%), Gaps = 47/380 (12%)

Query: 12  NHPAS-LKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           + P S L R ++  I+ +    + W+++  ++I   + G+ ++      I+     ++K 
Sbjct: 50  DSPVSPLPRWSMRVIVALFACALLWALIGQLDIVAVAGGKTVSGGRTKIIQPLEPSVVKA 109

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKV--SIKNLRCHIDTEKSALDFLNN----- 122
             V +G Q+++ + LL   D  T    D +K   +++  R      ++ L  L+N     
Sbjct: 110 IHVRDG-QLVKASQLLIELDA-TAAGADNRKAGDALETARLAAARYQALLAALDNGRLPQ 167

Query: 123 --KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             K D ++ A +  EE L   +G++ +  +K      +   R  ++  TR + I L    
Sbjct: 168 LEKLDGVDPAKQLSEETL--AIGQWRAYQAKRDALQATLRQREAELSTTRQQVIKL---- 221

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAV---------SQNDL-NQQERIVYKSTLEL 230
              + ++  A    H     + KN   K+A           Q DL +QQ RI      EL
Sbjct: 222 ---QGTVRLAEAREHDYQELLDKNFISKHAYLDKQQARIEQQGDLASQQSRI-----QEL 273

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              I  Q+  L+ +      AN   ++ L ++    EQ  ++  +E+ K     + +   
Sbjct: 274 AAAIASQREELQALT-----ANFR-SDALDKLREAREQAMQS-GEEVKKTG---RRQALT 323

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P+AG++      +      ++QPL+ +VP ++   + A++  K I  V+ G   TV
Sbjct: 324 QLTAPVAGSVQQLAIHTVGGVVTEAQPLLAVVPANETLEVEAQIENKDIGFVRPGQAVTV 383

Query: 351 RFPHYADIREKKFKAIIEKI 370
           +   +   R      ++E +
Sbjct: 384 KVESFPYTRYGYLDGVVETV 403


>gi|156511253|gb|ABU68827.1| RtxD [Listonella anguillarum]
          Length = 450

 Score = 43.1 bits (100), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 78/360 (21%), Positives = 158/360 (43%), Gaps = 34/360 (9%)

Query: 9   LKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L+++ P+   R+T +++ +G++  + W+    ++I  +++G +L       I+S     +
Sbjct: 28  LQQSPPSPFARITAITLSVGLLLTLLWTYWGKLDIQATANGRLLVPGRSQVIQSYEQSRV 87

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  + +G ++ +G PLLT + +  +         I+ LR  I  +    +FL  KY  L
Sbjct: 88  AQIHIADGERVEKGMPLLTLDTLGVSQ-------DIERLRHQIRYQTH--EFL--KYQAL 136

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
               +  +  L   L    S   +V +    +     K  L  +R+    +++L ++SSL
Sbjct: 137 RGKADLAQHPL--HLALAPSAQQEVID-SFDTEKNEFKSVLENLRAEM--QVNLASQSSL 191

Query: 188 ------LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                 L+ L+S+  + L   K L ++  + Q    +QE+ + +S   L +   +Q  + 
Sbjct: 192 EVDIRGLKQLVSNITQRLDAQKKLKQQRLIGQVQYLEQEKELLESERALAQQTSQQHVLQ 251

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTREQ---KTILSPIA 297
           +    L  E  L+     K  +R+ +   +    ++S L   L+K RE    + + SP+ 
Sbjct: 252 KQYLNL--EERLKALRAQK--AREWQDKSQQAHLQLSALQHELDKVREHEGLQVVRSPVT 307

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           GT+      +     Q +Q LM IVP   +     K+  K I  +  G   T++   FP+
Sbjct: 308 GTVQQLSVHTLGAVLQPAQNLMIIVPDDSVQVAEVKILNKDIGFIYAGQPVTLKIDAFPY 367


>gi|134277898|ref|ZP_01764613.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 305]
 gi|167719465|ref|ZP_02402701.1| HlyD family secretion protein [Burkholderia pseudomallei DM98]
 gi|167815661|ref|ZP_02447341.1| HlyD family secretion protein [Burkholderia pseudomallei 91]
 gi|167894153|ref|ZP_02481555.1| HlyD family secretion protein [Burkholderia pseudomallei 7894]
 gi|167902583|ref|ZP_02489788.1| HlyD family secretion protein [Burkholderia pseudomallei NCTC
           13177]
 gi|217421291|ref|ZP_03452795.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 576]
 gi|226197315|ref|ZP_03792892.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei Pakistan 9]
 gi|237812364|ref|YP_002896815.1| HlyD family secretion protein [Burkholderia pseudomallei MSHR346]
 gi|254179719|ref|ZP_04886318.1| HlyD family secretion protein [Burkholderia pseudomallei 1655]
 gi|254188885|ref|ZP_04895396.1| HlyD family secretion protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254259659|ref|ZP_04950713.1| HlyD family secretion protein [Burkholderia pseudomallei 1710a]
 gi|254297569|ref|ZP_04965022.1| HlyD family secretion protein [Burkholderia pseudomallei 406e]
 gi|134251548|gb|EBA51627.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 305]
 gi|157807870|gb|EDO85040.1| HlyD family secretion protein [Burkholderia pseudomallei 406e]
 gi|157936564|gb|EDO92234.1| HlyD family secretion protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|184210259|gb|EDU07302.1| HlyD family secretion protein [Burkholderia pseudomallei 1655]
 gi|217395033|gb|EEC35051.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 576]
 gi|225930694|gb|EEH26704.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei Pakistan 9]
 gi|237506580|gb|ACQ98898.1| HlyD family secretion protein [Burkholderia pseudomallei MSHR346]
 gi|254218348|gb|EET07732.1| HlyD family secretion protein [Burkholderia pseudomallei 1710a]
          Length = 469

 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 82/417 (19%), Positives = 161/417 (38%), Gaps = 40/417 (9%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +I L+ W+    I+I  +  G+++    V ++ +   GI+++  V  G  + +G PL+  
Sbjct: 68  LIVLVLWATFFKIDIIAAGQGKVIPSTTVQQLSTLEGGIVRELLVREGQIVKKGQPLVRL 127

Query: 88  EDIETTDLIDLKKV-------SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           + +     +  +         SI  L+   D + + L     K +++     S EE +  
Sbjct: 128 DPVVAQGAVTEQAATREGLMASIARLQAEADGKATPLYPAGLKPEIV-----SEEEHV-- 180

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDL 199
                 +  ++  N  I  + +    K       Y  R+    N   LL          +
Sbjct: 181 -----RAQRAEALNSTIEVLQQQRAAKQAEAAD-YRGRIPQYVNNQHLL-------DDQI 227

Query: 200 TMMKNLFEKNAVSQNDLN--QQERI-VYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             M  L    +V+ N++   Q+ER  +    +  RE   +    +   +   +E    F 
Sbjct: 228 QRMLPLVGVGSVAPNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKIEEKISTFR 287

Query: 257 NYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           +  +E ++R   Q Q        K  IL++T     I SP+ G +      +    A   
Sbjct: 288 SEAREELARKQVQLQALEGTLSGKQDILDRT----LIRSPVNGIVKTLYITTIGGVASPG 343

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + ++ IVP +    I A++ P+ I +++ G  A VR   +         A +E I P   
Sbjct: 344 KSVIDIVPTNDSLLIEARIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELISP--D 401

Query: 376 QQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            Q +      YY+V ++   + +A    ++ +  G  A+V       T+   I+ PI
Sbjct: 402 SQADERSGSLYYKVQVRTHSSVVATQVGDLNILPGMVADVDVITGRRTIMSYILRPI 458


>gi|304391431|ref|ZP_07373373.1| type I secretion membrane fusion protein, HlyD [Ahrensia sp.
           R2A130]
 gi|303295660|gb|EFL90018.1| type I secretion membrane fusion protein, HlyD [Ahrensia sp.
           R2A130]
          Length = 440

 Score = 43.1 bits (100), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 65/341 (19%), Positives = 134/341 (39%), Gaps = 41/341 (12%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            + W+    IE   S  G ++    +  ++S   GII++  V  G  +  G  L+T +D 
Sbjct: 40  FVAWAWFFEIEERTSGQGRVIPSSQLQVVQSLEGGIIREIGVATGDIVEAGQLLMTIDDT 99

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             +  +      + + R  + TE+  L              E+R ++ L F  ++     
Sbjct: 100 GFSSTLG----EVTSRRQALLTEQVRLR------------AEARGDETLKFAEEFAVANP 143

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRL--------DLENKSSLLRALLSSHQKDLTMM 202
           K+     + V++S + +L     +  +RL        +   + + L       +K+ T+ 
Sbjct: 144 KLVASE-TEVFQSRQQQLIAELEVLDDRLIQRQGELAEARARQTKLATTAEPLRKETTLT 202

Query: 203 KNLFEKNAVSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           + L  +  V + D L    R+      E+  +I   +  +  +     EA  +  +    
Sbjct: 203 RRLVRRGVVPEVDYLRLASRLA-----EIDGDIAVAEAQIPKLEAAISEAKKQLVSTRN- 256

Query: 262 ISRDLEQNQRTFADEMSKLTILEKT------REQKTIL-SPIAGTIVYNQSFSSSNYAQQ 314
            +  L  N+R  A    +L +L++T      R  +T L SP+ G +      +     Q 
Sbjct: 257 -TYKLAANER-LAKLQGELAVLQQTELGAEDRVSRTQLRSPVRGVVNKVNIATVGAVVQP 314

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             PL+++VP      + A + P+ +  ++ G  A+V+   Y
Sbjct: 315 GAPLVEVVPSEDGLLVEASIRPQDVAFIRVGGKASVKLTAY 355


>gi|167034352|ref|YP_001669583.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida GB-1]
 gi|166860840|gb|ABY99247.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida GB-1]
          Length = 446

 Score = 43.1 bits (100), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 91/448 (20%), Positives = 166/448 (37%), Gaps = 66/448 (14%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           + I G  G + WS L P++  V ++G +    N   ++    G ++   V  G  + +G 
Sbjct: 32  MVIAGFGGFLLWSCLAPLDAGVVATGTVKVTSNRKAVQHLSGGTVEAILVREGDVVKKGQ 91

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
                   E   L  L+ V+          E+ AL   + +Y ++ K  E+R E   D  
Sbjct: 92  --------EVVRLDALRAVA----------EQGAL---SAQY-IVSKTVENRLEAERD-- 127

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           G+ + T          S  R L     + R +   R  L  + ++L   L++    L  +
Sbjct: 128 GRDNVTFDPALLEHYGSDPRLLAAMDLQQRLLDTRRAGLAGELNILEENLTASAVQLKGL 187

Query: 203 KNLFEKNAVSQNDLNQQ---ERIVY--------------KSTLELRENIHEQKNMLRHIN 245
           + ++   A     LNQ+    R++               +S  +L     E  N +    
Sbjct: 188 QQVYGARASQIGFLNQELQGTRVLAAEGYVPRNRLLELERSNADLAAGQAENLNNIARAR 247

Query: 246 ELYDEANLEFA----NYLKEISRDLEQNQR---TFADEMSKLTILEKTREQKTILSPIAG 298
               E  L       +YLKE+   L    +   T AD   +L  L+       I SPI G
Sbjct: 248 SQATEIKLRMLQRQHDYLKEVESQLTDTAKENTTLAD---RLRALDYEVTHTVIRSPIDG 304

Query: 299 TIVYNQSFSSSNYAQQSQP---LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +   Q  S +      QP   +M++VP  +   + A +  + I  +  G    + FP +
Sbjct: 305 MV---QGLSIATVGGIIQPGAKIMEVVPLDQPLQVDAMIPVQAIDKMVPGLAVDIAFPAF 361

Query: 356 ADIREKKFKAIIEKI--DPIISQQDNNLQTQEYY--EVILKITDLAFSDNNIELRNGFPA 411
              +       ++ I  D ++ ++      Q +Y  +V +  T +    +N  +R G PA
Sbjct: 362 NHAQTPNIPGRVKTISADRLLDEESK----QPFYLAQVEVTPTGMGLLGSN-HIRPGMPA 416

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V        L   ++ P+ +     F+
Sbjct: 417 TVTIKTGERNLLSYLLKPMLERVDAAFK 444


>gi|53719290|ref|YP_108276.1| putative toxin-related secretion protein [Burkholderia pseudomallei
           K96243]
 gi|76810044|ref|YP_333590.1| HlyD family secretion protein [Burkholderia pseudomallei 1710b]
 gi|167738469|ref|ZP_02411243.1| HlyD family secretion protein [Burkholderia pseudomallei 14]
 gi|167824069|ref|ZP_02455540.1| HlyD family secretion protein [Burkholderia pseudomallei 9]
 gi|167910818|ref|ZP_02497909.1| HlyD family secretion protein [Burkholderia pseudomallei 112]
 gi|167918850|ref|ZP_02505941.1| HlyD family secretion protein [Burkholderia pseudomallei BCC215]
 gi|52209704|emb|CAH35663.1| putative toxin-related secretion protein [Burkholderia pseudomallei
           K96243]
 gi|76579497|gb|ABA48972.1| HlyD family secretion protein [Burkholderia pseudomallei 1710b]
          Length = 471

 Score = 43.1 bits (100), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 82/417 (19%), Positives = 161/417 (38%), Gaps = 40/417 (9%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +I L+ W+    I+I  +  G+++    V ++ +   GI+++  V  G  + +G PL+  
Sbjct: 70  LIVLVLWATFFKIDIIAAGQGKVIPSTTVQQLSTLEGGIVRELLVREGQIVKKGQPLVRL 129

Query: 88  EDIETTDLIDLKKV-------SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           + +     +  +         SI  L+   D + + L     K +++     S EE +  
Sbjct: 130 DPVVAQGAVTEQAATREGLMASIARLQAEADGKATPLYPAGLKPEIV-----SEEEHV-- 182

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDL 199
                 +  ++  N  I  + +    K       Y  R+    N   LL          +
Sbjct: 183 -----RAQRAEALNSTIEVLQQQRAAKQAEAAD-YRGRIPQYVNNQHLL-------DDQI 229

Query: 200 TMMKNLFEKNAVSQNDLN--QQERI-VYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             M  L    +V+ N++   Q+ER  +    +  RE   +    +   +   +E    F 
Sbjct: 230 QRMLPLVGVGSVAPNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKIEEKISTFR 289

Query: 257 NYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           +  +E ++R   Q Q        K  IL++T     I SP+ G +      +    A   
Sbjct: 290 SEAREELARKQVQLQALEGTLSGKQDILDRT----LIRSPVNGIVKTLYITTIGGVASPG 345

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + ++ IVP +    I A++ P+ I +++ G  A VR   +         A +E I P   
Sbjct: 346 KSVIDIVPTNDSLLIEARIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELISP--D 403

Query: 376 QQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            Q +      YY+V ++   + +A    ++ +  G  A+V       T+   I+ PI
Sbjct: 404 SQADERSGSLYYKVQVRTHSSVVATQVGDLNILPGMVADVDVITGRRTIMSYILRPI 460


>gi|211970998|dbj|BAG82828.1| membrane fusion protein [Pasteurella pneumotropica]
          Length = 474

 Score = 43.1 bits (100), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 86/368 (23%), Positives = 160/368 (43%), Gaps = 55/368 (14%)

Query: 14  PASL--KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           P S+  +R + L ++ I+    W+I   ++I  +++G+I    N   I+   + I++K  
Sbjct: 52  PVSVLPRRSSHLIMVLILITCVWAIFGKVDIVSTATGKIAYSGNSKIIQPIENAIVEKIY 111

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD------ 125
           V +G  + +G  LL    +   +  +L+K + + L      +  A   LN+ Y       
Sbjct: 112 VNDGQSVEKGELLLELTSLGAKE--ELQKAN-QALSSAKLAKVRADALLNSIYSNTPPYL 168

Query: 126 -VLEKAFESREEQ-----LLDFLGKY---HSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + +++  S E Q     +L     Y       + + +    + Y ++KM++ + RS  L
Sbjct: 169 KIDDESISSVELQQSRQLILAQFNTYLLQQQKAAALLDQK-QAEYITIKMQINKYRS--L 225

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-LNQQERIVYKSTLELRENIH 235
            +L+ E  + L                NL + NA+S++  L Q+ R      L++   I 
Sbjct: 226 QKLEKEKTNDL---------------ANLLKSNAISKHQYLEQKARF-----LDINNEIL 265

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR---EQKT- 291
             ++ L  IN    +A  E        +RD +   R  A+E  K  + EK +    QKT 
Sbjct: 266 TLESRLNEINAEIQQAKDEKELLTNTFTRDTQDALRQ-ANEQIKQLVFEKEKYAERQKTT 324

Query: 292 -ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP-HSKLTYIRAKVTPKQIQHVKKGYTAT 349
            I +P+ G+I      +       +QPLM +VP H KL  ++A +  + I  + +G   T
Sbjct: 325 QIKAPVTGSIQQLAVHTIGGVVTTAQPLMVVVPKHDKLE-VKAIIDNQDIGFIHQGQEVT 383

Query: 350 VR---FPH 354
           V+   FP+
Sbjct: 384 VKIETFPY 391


>gi|255009591|ref|ZP_05281717.1| putative ABC transport system, lipoprotein [Bacteroides fragilis
           3_1_12]
 gi|313147370|ref|ZP_07809563.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136137|gb|EFR53497.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 298

 Score = 43.1 bits (100), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 42/200 (21%), Positives = 84/200 (42%), Gaps = 28/200 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R D+  + +  R  +++ Q++   ++NL +  A +Q  L+  +  V     +L
Sbjct: 83  MKSVESQRPDVNKQIAATRQQIATAQREKKRVENLLKAGAANQKQLDDWDAQVALLERQL 142

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +   +N    + E      ++ A                  D+++K           
Sbjct: 143 AAQMSSLQNSTNSLTEQGSSVAIQVAQ---------------VEDQLAKC---------- 177

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I+SPI+GT++   +  +   A   +PL K+     + Y+RA +T +Q+  VK G   TV
Sbjct: 178 HIVSPISGTVLAKYA-EAGELAAVGKPLFKVADVDHM-YLRAYITSEQLSQVKIGNRVTV 235

Query: 351 RFPHYADIREKKFKAIIEKI 370
            F  Y     K++  ++  I
Sbjct: 236 -FSDYGGNERKEYPGVVSWI 254


>gi|227112899|ref|ZP_03826555.1| HlyD family secretion protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 453

 Score = 43.1 bits (100), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 91/449 (20%), Positives = 181/449 (40%), Gaps = 61/449 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  + P S+ R TL +I    +  I W+ L  I+      G+ +    + +I++   G
Sbjct: 30  RAMAEDSPRSI-RFTLWAIGAFFLFFILWAGLANIDEVTRGDGKAIPSSRLQKIQNLEGG 88

Query: 66  IIKKFQVENGSQILQGTPLLTFED------IETTDLIDLKKVS-IKNLRCHIDTEKSALD 118
           II +  +  G  +  G PLL  +D      +  T+   L  +S I+ L   I+ ++    
Sbjct: 89  IITEVFIREGQVVNAGDPLLRLDDTRFASNVGETEADRLALLSRIERLNAEINGQEL--- 145

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L+ +         + E++L      Y+S   ++ N  IS +   L  +   +R      
Sbjct: 146 VLSEEITTQAPKIAAGEKEL------YNSRRQQLHNE-ISGLEEQLIQRQQELRDFSAKE 198

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL-------- 230
           +   N   LL       Q+++ M + L  + A+S+ ++ +  R   ++  +L        
Sbjct: 199 IQFRNSLGLL-------QQEIKMSEPLIAEGAISKVEVLRLRRAEVETRGQLDSIKLSIP 251

Query: 231 --RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                I E +N +      Y    L   +  +     +E   +   D +++  ++   R 
Sbjct: 252 RAESAIKESENKIEETRSRYKSEALSQLSEAQTSLNKIEATGKALEDRVNRTLVVSPVRG 311

Query: 289 --QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             Q+ +++ I G I            Q    L++IVP      + AK+ P+ I  +  G 
Sbjct: 312 IVQQVLVNTIGGVI------------QPGSDLVEIVPLDDKLLVEAKIRPQDIAFLHPGQ 359

Query: 347 TATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITD---LAFSDNN 402
            A ++   Y +      K  +E+I P  ++ ++ N     +Y + L+ TD   L  +D  
Sbjct: 360 DAIIKLTAYDNTIYGGLKGQLEQISPDTVTDKEGN----SFYIIRLR-TDKNYLGTADKP 414

Query: 403 IELRNGFPAEV-LFTAKNTTLAQEIIHPI 430
           + +  G  A V + T K T L+  ++ PI
Sbjct: 415 LLIIPGMVASVDIITGKKTILSY-LLKPI 442


>gi|227326949|ref|ZP_03830973.1| protease secretion protein [Pectobacterium carotovorum subsp.
          carotovorum WPP14]
          Length = 101

 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 46/87 (52%)

Query: 5  MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
          M +  +R+   +++   LL + G  G + W++  P++  V  +G ++   N   ++    
Sbjct: 11 MNQTARRDEKRAVRLGWLLVLAGFGGFLLWALFAPLDKGVMVNGSVVISGNRKVVQHNQG 70

Query: 65 GIIKKFQVENGSQILQGTPLLTFEDIE 91
          GI+ K QV++G ++  G  LLT  +++
Sbjct: 71 GIVDKIQVKDGDRVEAGQILLTLNEVD 97


>gi|330890714|gb|EGH23375.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 447

 Score = 43.1 bits (100), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 67/329 (20%), Positives = 135/329 (41%), Gaps = 37/329 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I++  ++SG+I+       I+S  + ++K   V +G  +  G  LL  +   T+   D+ 
Sbjct: 52  IDVVATASGKIIPSGKTKTIQSSETAVVKAIHVHDGQSVKAGQLLLELD--STSADADVG 109

Query: 100 KVSIKNLRCHIDTEKSA--LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           +V    L   ID+ ++A  LD +N +     K        ++D     H   ++ +  G 
Sbjct: 110 RVRSDLLAARIDSARAAAMLDAINQR-----KPPRDLTGTIVDA-DPMHVLAAERWLQGQ 163

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL---LSSHQKDLTMM-------KNLFE 207
              YRS         S+ L   +++ + + ++A    ++S QK L +        +NL +
Sbjct: 164 YQEYRS---------SLDLVDAEIQQRQADIQAARIQVTSLQKTLPIATKLASDYENLLK 214

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD-- 265
           K  ++++   ++E    ++ L+L   +  Q+  +        EA       + +  R   
Sbjct: 215 KQYIARHAYLEKE----QARLDLERQLSVQQASVLQPTAARQEAERRREGVVAQTRRAML 270

Query: 266 --LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L+Q  +  A     LT      +  T+ +P+ GT+      +       +QPLM  VP
Sbjct: 271 DLLQQADQKIASFNQDLTKARYQEDLTTLEAPVDGTVQQLAVHTVGGVVTPAQPLMVRVP 330

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
             +   + A +  K +  V+ G   TV+ 
Sbjct: 331 DGQPVEVEAMLENKDVGFVRAGQPVTVKV 359


>gi|237800612|ref|ZP_04589073.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|320324243|gb|EFW80322.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|331023472|gb|EGI03529.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 473

 Score = 43.1 bits (100), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 79/365 (21%), Positives = 154/365 (42%), Gaps = 39/365 (10%)

Query: 13  HPASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           HPA   R+ + +II    L+  W+ +  I+I  +++G+++       I+S  + +++   
Sbjct: 52  HPAP--RIFIWAIILFATLLLIWACVGKIDIVATANGKVIPSGKTKIIQSSETAVVRAIY 109

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA--LDFLNNKYDVLEK 129
           V +G  +  G  LL  +   T+   D+ K+    L   ID+ ++   LD +N  +     
Sbjct: 110 VNDGQVVKAGQLLLELDS--TSADADVGKIESDLLAARIDSARAGAMLDAINGNH----- 162

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLL 188
           A  S  + +L      H   ++ +  G    YRS    L +  +  L R  D++      
Sbjct: 163 APRSLADTILGG-DPEHVLAAERWLQGQYQEYRS---NLEQGETEILQRQADIQAA---- 214

Query: 189 RALLSSHQKDLTMM-------KNLFEKNAVSQNDL--NQQERIVYKSTLELRENIHEQKN 239
           RA ++S QK L +        ++L +K  ++++     +Q R+  +  L +++    Q N
Sbjct: 215 RAQVASLQKTLPIATKLAQDYEHLLQKQYIARHAYLEKEQARLDLERQLAVQQISVLQSN 274

Query: 240 MLRHINELY-DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             R   E   D    +    + ++ +  +Q   + + E+SK    E   +  T+ +P+ G
Sbjct: 275 AARQQAERRRDGVVAQTRRAMLDLLQQADQKVASLSQELSKARYQE---DLTTVEAPVDG 331

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR-----FP 353
           T+      +       +QPLM +VP      + A +  K +  V  G   TV+     F 
Sbjct: 332 TVQQLNIHTVGGVVTPAQPLMMLVPSDVSVEVEAMLENKDVGFVHVGQDVTVKVETFTFT 391

Query: 354 HYADI 358
            Y  I
Sbjct: 392 KYGTI 396


>gi|242279680|ref|YP_002991809.1| secretion protein HlyD family protein [Desulfovibrio salexigens DSM
           2638]
 gi|242122574|gb|ACS80270.1| secretion protein HlyD family protein [Desulfovibrio salexigens DSM
           2638]
          Length = 430

 Score = 43.1 bits (100), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 100/440 (22%), Positives = 172/440 (39%), Gaps = 36/440 (8%)

Query: 5   MWKNLKRNHPASLKR-----MTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVE 58
           M KN K N   SL++     + LL I+G  I  + W+    IE +V + G +  E N+ +
Sbjct: 1   MGKNWKSNLLWSLEKSLGNCIVLLLILGFTIVFMLWAHSSKIEKTVRAQGVV--ETNLTD 58

Query: 59  -IKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTD-----LIDLKKVSIKNLRCHID 111
            I   F  G+++K  VE G  + +G  ++   +   T+     LI +K++  K  R   +
Sbjct: 59  KIVGHFEGGVVEKVFVEEGDTVRKGQEIVAIANTNITEKRNKSLIKMKRLQAKLNRLMAE 118

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           +        NN  +   KA    E   + F         +  N   + + +S +  L+  
Sbjct: 119 SN-------NNTDEFSHKASTPEERSEIQFARIRGDALKEKINILKTQIQQS-RAALSAS 170

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                N LD +      + L   H     M++ + +K   S+  L Q++  + K T  + 
Sbjct: 171 EKHVQNLLDEQ------KVLKEQHD----MLEPMVKKGIGSRQLLLQRKTELAKITTNIA 220

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E  +++      I EL    N E  ++ ++I  ++            +L    +   +  
Sbjct: 221 EIYNKRDEYSLEIRELEQRINQEELDFYRDIREEINLVSSELKGVREELNAANEQIVRSV 280

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SPI GTI    + +     +  + L +IVP      I  KV P     +  G TA +R
Sbjct: 281 IRSPIDGTIYKLSANTVGGIVRSGEALAEIVPLDATIRIEGKVQPSDRTKIWNGMTAKIR 340

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              Y    +   KA I  I       D  L    YY VI   T    ++   E   G   
Sbjct: 341 PSSYEFSDQTMLKAKIVNISAKTYFDD--LTRTWYYRVIFN-TIKEDAEKVKEFLPGMIV 397

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
           EV   +   ++ + ++ PIT
Sbjct: 398 EVNILSGEESVLEYLLSPIT 417


>gi|307295607|ref|ZP_07575443.1| type I secretion membrane fusion protein, HlyD family [Sphingobium
           chlorophenolicum L-1]
 gi|306878646|gb|EFN09866.1| type I secretion membrane fusion protein, HlyD family [Sphingobium
           chlorophenolicum L-1]
          Length = 424

 Score = 43.1 bits (100), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 88/437 (20%), Positives = 170/437 (38%), Gaps = 40/437 (9%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W    R  P + K++ L S  G++  + W+ L P++      G ++       I+S    
Sbjct: 5   WIGWLRGQPGN-KQVILYSGGGMLVFLMWASLAPVDEVTHGQGRVIPSSKAQVIQSAEPT 63

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I++  V +G ++ +G  L+  +D                L   +   ++    L  +  
Sbjct: 64  TIEEILVRSGQKVSKGQLLVRLDD--------------AMLASELGQIQAETRSLTARAG 109

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            LE+  E   E      G       +       S  RS +  ++   ++   R +L    
Sbjct: 110 RLER--EGTGEGAACTTGGPECAQEQALAAVRQSALRSKQDAMSA--AVDQRRRELGEAQ 165

Query: 186 SLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKN 239
           + + +L  S Q   + + M++ L  K+ + Q +L    R +  +   L   ++       
Sbjct: 166 ATIDSLGGSVQLARQRVAMLEPLAAKSIIPQTELLDARRDLVDAQGRLNAAQQQASRAAA 225

Query: 240 MLRHINELYDEANLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIA 297
            +R       EAN +F  + L E S+ LE      ++ +       K R Q+  I SP+ 
Sbjct: 226 AIREAQAQLSEANFQFRQDALNERSQ-LEAKIAVNSESLRG----AKGRAQRAEIRSPVD 280

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q  +   Y    Q +M+IVP  +   + A+V P  I  +K G  A V+   Y D
Sbjct: 281 GVVNDVQVTTIGGYVSPGQKIMQIVPVGEKLLVEARVKPNDIAFIKTGDRAVVKVTAY-D 339

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEV- 413
                +  +   +  + +    +  T+E Y  ++  TD A+       + +  G   +V 
Sbjct: 340 F--SIYGGLTGTVQQVSADSVYDEATREAYFTVVVETDRAWLGSGARKLPITPGMVCDVE 397

Query: 414 LFTAKNTTLAQEIIHPI 430
           + T + + LA  ++ PI
Sbjct: 398 IMTGRKSVLAY-LLKPI 413


>gi|218680844|ref|ZP_03528741.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           etli CIAT 894]
          Length = 157

 Score = 43.1 bits (100), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 3/148 (2%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P++G +      + +      + LM +VP ++   + AKV  + I  V  G +  VR
Sbjct: 9   ITAPLSGRVHELSVHTVNGVVNPGETLMLVVPENEDLTVEAKVATRDIDQVHVGQSVDVR 68

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFP 410
           F  +        +  I  I P I + +       YY + +K    + +    I+L  G P
Sbjct: 69  FSAFDQRTTPDVRGEITSIAPDIVKDERT--GISYYPLRVKPEAASIAKLKAIKLYPGMP 126

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           AEV     + T+   +  P+TD    +F
Sbjct: 127 AEVFIKIADRTVISYLTKPLTDQMQHVF 154


>gi|153806684|ref|ZP_01959352.1| hypothetical protein BACCAC_00954 [Bacteroides caccae ATCC 43185]
 gi|149131361|gb|EDM22567.1| hypothetical protein BACCAC_00954 [Bacteroides caccae ATCC 43185]
          Length = 299

 Score = 43.1 bits (100), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 28/197 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R DL  + +  +  +++ +++   ++NL    A +Q  L+  +  V    L  
Sbjct: 84  MKSVESQRPDLAKQIAATKQQIATAEREKKRVENLLTAGAANQKQLDDWDAQV---KLLE 140

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R+   ++ ++L   N L ++ N         ++  + Q      D+++K           
Sbjct: 141 RQLAAQESSLLNSTNSLTEQGN--------SVAIQVAQ----VKDQLNKC---------- 178

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I SPI GT++   +  +   A   +PL K+    ++ Y+RA +T +Q+  VK G   TV
Sbjct: 179 HIQSPIEGTVLAKYA-EAGELAAVGKPLFKVAEIGRM-YLRAYITSEQLSQVKLGDKVTV 236

Query: 351 RFPHYADIREKKFKAII 367
            +  Y +  +K +  +I
Sbjct: 237 -YSDYGNSEQKAYTGVI 252


>gi|117924454|ref|YP_865071.1| hypothetical protein Mmc1_1154 [Magnetococcus sp. MC-1]
 gi|117608210|gb|ABK43665.1| conserved hypothetical protein [Magnetococcus sp. MC-1]
          Length = 490

 Score = 43.1 bits (100), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 5/67 (7%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L+++G +GL+    LLP+ +SV +  E++ +   + + +P  G++K+  V+    +  GT
Sbjct: 228 LALVGAVGLM----LLPVRLSVLAPSEVVAKTPFM-VNAPIDGVVKEILVQPNQLVEPGT 282

Query: 83  PLLTFED 89
           PL T +D
Sbjct: 283 PLFTLDD 289


>gi|27367509|ref|NP_763036.1| protease ABC transporter membrane fusion protein PrtE/AprE [Vibrio
           vulnificus CMCP6]
 gi|37677311|ref|NP_937707.1| membrane-fusion protein [Vibrio vulnificus YJ016]
 gi|320159363|ref|YP_004191741.1| protease exporter membrane fusion protein (MFP) family component
           PrtE/AprE [Vibrio vulnificus MO6-24/O]
 gi|27359081|gb|AAO08026.1| ABC-type protease exporter, membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio vulnificus CMCP6]
 gi|37201857|dbj|BAC97677.1| membrane-fusion protein [Vibrio vulnificus YJ016]
 gi|319934675|gb|ADV89538.1| ABC-type protease exporter, membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio vulnificus MO6-24/O]
          Length = 463

 Score = 43.1 bits (100), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 87/447 (19%), Positives = 181/447 (40%), Gaps = 48/447 (10%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P + + M  + ++     I W+    I+      G+++    +  +++   G++K+  
Sbjct: 27  NTPTNARLMLWVIVLFFAVAIGWAAWAEIDKVTVGQGKVIPSSQIQIVQNLEGGLVKEIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +G  LL  +D         ++  + NL   +    S++D +      +++ F
Sbjct: 87  VKEGQLVQKGQQLLLIDDTRFRSDYREREQQVANLTAAVLQLTSSIDSVE-----IDEEF 141

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK----LTRMRSIYLNRLD-LENKSS 186
            + E +            S V  YG  +    L+ +    + R R+ Y   L+ L N+ S
Sbjct: 142 TNAEWE-----------KSVVIKYGQLAFPAELEQQQPELIARQRAEYRQDLNNLRNQIS 190

Query: 187 LLRALLSSHQKDL----TMMKNLFEKNAVSQNDLN-----QQERIVYK-STLELRENIHE 236
           +L   +   Q+DL      +KNL + +  ++ +L        E +V K   L+L+  +++
Sbjct: 191 VLTQQVKQKQQDLVEIQARVKNLRQGHVFAKKELEITQPLADEGVVPKIELLKLQRQVND 250

Query: 237 QKNMLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL---TILEKT 286
            +  L         +     EA L   +   +   + ++      D++S L    +  + 
Sbjct: 251 TRRELTSTELKIPVLQSTIREAMLSRIDAALKFRSEQQEKLNKTQDQLSALVESAVGLRD 310

Query: 287 REQKTI-LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           R ++T+ +SP+ G I      +     Q    +++IVP      + AK+ P+ I  ++  
Sbjct: 311 RVKRTVVISPVTGKIKTLNINTVGGVIQPGMDIVEIVPTEDSLLVEAKIAPQDIAFLRPN 370

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIE 404
             A V+F  Y   +       +E I    +Q +       +Y V ++     F  D  + 
Sbjct: 371 LPAVVKFTAYDFTKYGGLDGELEHISADTTQDEEG---NSFYIVRVRTEKTNFGQDAELP 427

Query: 405 LRNGFPAEV-LFTAKNTTLAQEIIHPI 430
           +  G  A V + T K T L + ++ PI
Sbjct: 428 IIPGMTASVDIITGKRTVL-EYLLKPI 453


>gi|294012214|ref|YP_003545674.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292675544|dbj|BAI97062.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 424

 Score = 43.1 bits (100), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 90/437 (20%), Positives = 169/437 (38%), Gaps = 40/437 (9%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W    R  P + K++ L S  G++  + W+ L P++      G ++       I+S    
Sbjct: 5   WIGWLRGQPGN-KQVILYSGGGMLVFLMWASLAPVDEVTHGQGRVIPSSKAQVIQSAEPT 63

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I++  V +G ++ +G  L+  +D                L   +   ++    L  +  
Sbjct: 64  TIEEILVRSGQKVSKGQLLVRLDD--------------AMLASELGQIQAETRSLTARAG 109

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            LEK  E   E      G       +       S  RS +  L+    +   R +L    
Sbjct: 110 RLEK--EGTGEGAACTTGGPECAQEQALAAVRQSALRSKQDALSAQ--VDQRRRELGEAQ 165

Query: 186 SLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKN 239
           + + +L  S Q   + + M++ L  K+ + Q +L    R +  +   L   ++       
Sbjct: 166 ATIDSLGGSVQLARQRVAMLEPLAAKSIIPQTELLDARRDLVDAQGRLNAAQQQASRAAA 225

Query: 240 MLRHINELYDEANLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIA 297
            +R       EAN +F  + L E S+ LE      ++ +       K R Q+  I SP+ 
Sbjct: 226 AIREAQAQQSEANYQFRQDALNERSQ-LEAKIAVNSESLRG----AKGRAQRAEIRSPVD 280

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q  +   Y    Q +M+IVP      + A+V P  I  +K G  A V+   Y D
Sbjct: 281 GVVNDVQVTTIGGYVSPGQKIMQIVPVGDKLLVEARVKPNDIAFIKTGDRAVVKVTAY-D 339

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEV- 413
                +  +   +  + +    +  T+E Y  ++  TD A+     + + +  G   +V 
Sbjct: 340 F--SIYGGLTGTVQQVSADSVYDEATREAYFTVVVETDRAWLGSGAHKLPITPGMVCDVE 397

Query: 414 LFTAKNTTLAQEIIHPI 430
           + T + + LA  ++ PI
Sbjct: 398 ILTGRKSVLAY-LLKPI 413


>gi|33595653|ref|NP_883296.1| HlyD family secretion protein [Bordetella parapertussis 12822]
 gi|33600174|ref|NP_887734.1| HlyD family secretion protein [Bordetella bronchiseptica RB50]
 gi|33565732|emb|CAE36276.1| HlyD-family secretion protein [Bordetella parapertussis]
 gi|33567772|emb|CAE31686.1| HlyD-family secretion protein [Bordetella bronchiseptica RB50]
          Length = 480

 Score = 43.1 bits (100), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 103/245 (42%), Gaps = 25/245 (10%)

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L + + L +  AVS+ DL + +R V +          EQK     I+ +      E  
Sbjct: 239 RELQVTRPLLKSGAVSEVDLLRLQRDVARYC-------GEQKGAEAQIDRIGASIK-EAQ 290

Query: 257 NYLKEISRDLEQNQRT-FADEMSKLTILEKTREQ-------KTILSPIAGTIVYNQSFSS 308
           + L+E   ++    R+  ++  +KL  L + +           I SP+ GT+    S + 
Sbjct: 291 SKLQEAELNIRNQARSELSETNTKLATLREGQAALADRVKLADIRSPVRGTVKSLFSNTV 350

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q  + +++IVP      +  +V P+ I  +     A V+F  Y        +  +E
Sbjct: 351 GGVVQPGKDIIEIVPTDDTLLLEVRVLPRDIGFLHPDQKAEVKFTAYDFAIYGGLEGHVE 410

Query: 369 KI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLAQE 425
           +I  D +  ++ N+     +Y V ++       D  + +  G  AEV + T K T L Q 
Sbjct: 411 QIGADTVTDEKGNS-----FYIVRVRTNSATLGDRKLPIIPGMVAEVHILTGKRTVL-QY 464

Query: 426 IIHPI 430
           ++ PI
Sbjct: 465 LLKPI 469


>gi|163745370|ref|ZP_02152730.1| type I secretion membrane fusion protein, HlyD family [Oceanibulbus
           indolifex HEL-45]
 gi|161382188|gb|EDQ06597.1| type I secretion membrane fusion protein, HlyD family [Oceanibulbus
           indolifex HEL-45]
          Length = 436

 Score = 43.1 bits (100), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 91/461 (19%), Positives = 180/461 (39%), Gaps = 75/461 (16%)

Query: 16  SLKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           S  R  +L  +G+     G  TW++   I  +V +SG I  + N   ++    G++ K  
Sbjct: 10  SATRPLILGFLGLFVLFGGFGTWAMTSQITGAVVASGRIEVDRNRQIVQHETGGVVAKIL 69

Query: 72  VENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEK-------------- 114
           V+ G  +  G  LL  +  + T    +I+ +   +   R  ++ ++              
Sbjct: 70  VDEGDSVAAGDVLLQLDAEQLTSQLAIIEGQLYELMARRGRLEAQRDEAEEVVFDKELNA 129

Query: 115 --SALDFLNNKYDVLEKAFESRE---EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             SA   +    D     F++R     Q L+ LGK  +         I++  R +  + T
Sbjct: 130 AASANPDVQELVDGQRNLFDARRVSVAQELEQLGKRRAQ--------INAQIRGVDAQET 181

Query: 170 RM-RSIYLNRLDLENKSSLL-RALLSSH-----QKDLTMMKNLFEKNAVSQNDLNQQERI 222
            + R + L   +L N+ SLL R L  +      Q++   ++   +   +S      QER+
Sbjct: 182 ALARQLELIEEELGNQQSLLDRGLTQASAVLNLQREQARLRG--QIGELSAQKAQSQERV 239

Query: 223 --VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             +    L+LR    E+      I +L D         L+    ++ + +R    E+ +L
Sbjct: 240 TEIDIERLKLRSAGREEA-----ITQLRD---------LRYRELEIAEQRRALKGEIDRL 285

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                      I +P++G I   Q  +  +  + ++PLM +VP  +   I ++V    I 
Sbjct: 286 ----------YIRAPVSGVIYAMQVQTPRSVVRAAEPLMYLVPQDRPLIIASRVQTIHID 335

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-DNNLQTQEYY--EVILKITDLA 397
            V  G    +R    + + ++    ++ K+  + +   +++   Q YY  E+ L   +  
Sbjct: 336 QVAVGQEVNLRL---SALNQRTTPELVGKVLQVSADSIEDDATGQTYYRAEIALNPGETD 392

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             +    L  G P E        T    ++ P+ D + + F
Sbjct: 393 KLEEGTILLPGMPVEAFIRTGERTPMAYLLKPMADYFARAF 433


>gi|75908771|ref|YP_323067.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75702496|gb|ABA22172.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 498

 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 166/377 (44%), Gaps = 65/377 (17%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI------LQG 81
           + G I W+ L  I+    + GE++    V  + S   G IK  +V+ G ++      +Q 
Sbjct: 53  VFGTIAWAALSEIDEVAVAQGELIASAQVRPVTSLGDGTIKAIKVQEGDRVTKDQVLIQR 112

Query: 82  TPLLTFEDI----ETTDLI--DLKKVSIKNLRCH-----IDTE--KSAL-DFLNNKYDVL 127
            P L   D+    ++T LI  D++++  + +        I  E  KS L D+   +    
Sbjct: 113 DPDLKQTDVTRLAQSTKLIQQDIQRLQAERIGGQTTGTPIQDELLKSRLRDYQARQAAAE 172

Query: 128 EKAFESR-------------EEQLLDFLGKYHSTCSKVFNY-GISS-VYRSLKMKLTRMR 172
            +A   R             ++ L++      +  + +FN   ISS V  +L++  +R +
Sbjct: 173 AEASRQRSLIDQARVRLIRLQDNLVNARTSVANAKTNLFNARSISSKVEENLEIAQSREK 232

Query: 173 SIYL-------NRLD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           ++ +        R+D LE +  L RA     Q D+T  K+    NA  QN L + E  V 
Sbjct: 233 NLRILITPGAVPRVDYLEARERLTRA-----QTDITRAKDEV-INA--QNRLTEAEDKVT 284

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL--EQNQRTFADEMSKLTI 282
                L ++I  Q   +R   + Y  A  +    + E   ++  E N+R   +E++ ++ 
Sbjct: 285 S----LEKDISAQDQEIRQAEQAYQAARNQAQRVVSERQSEILTEMNKRK--EELTNVSG 338

Query: 283 -LEKTREQ---KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            LE+ ++Q   +TI +P+AGTI   +  ++    Q  + L+ I+P  +   +  KV  + 
Sbjct: 339 QLEQAKKQTDGETIKAPVAGTIYKIK--ATKGPVQSGEELLSILPEGEEMLLEVKVLNRD 396

Query: 339 IQHVKKGYTATVRFPHY 355
           I  ++KG  A V+   +
Sbjct: 397 IGFIRKGMRAKVKMATF 413


>gi|332880164|ref|ZP_08447846.1| hypothetical protein HMPREF9074_03613 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332681923|gb|EGJ54838.1| hypothetical protein HMPREF9074_03613 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 326

 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 105/249 (42%), Gaps = 33/249 (13%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER--IVYKS 226
            ++RSI   R D+  + +  R  ++  + +     NL  +NA +Q  ++  E    V K 
Sbjct: 108 AQVRSIGSRRADVAKQVAATREQIAKAELERKRSLNLLAQNAGTQKQVDDVESQLAVLKK 167

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            LE + +     N  + + E  D A ++                R   D+      LEK 
Sbjct: 168 QLEAQLSTLNLGN--QGVTEEGDAAEIQI---------------RQIEDQ------LEKC 204

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           R    I+SPI+GT++   +        Q +PL K V   K  ++RA V+  Q+  VK G 
Sbjct: 205 R----IVSPISGTVLTKYA-ERGEVTAQGKPLFK-VADMKHVFLRAYVSGDQLSTVKLGQ 258

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  V   + A+ R K++K  I  I          +QT++    ++    +A  ++ + L+
Sbjct: 259 TVKVYADYGAEDR-KEYKGKITWISGQAEFTPKTIQTRDERANLVYAVKIAVENDGL-LK 316

Query: 407 NGFPAEVLF 415
            G   EV F
Sbjct: 317 LGMYGEVKF 325


>gi|4063018|gb|AAD09854.1| ABC transporter TliE [Pseudomonas fluorescens]
          Length = 433

 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 77/427 (18%), Positives = 159/427 (37%), Gaps = 38/427 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEIL--NEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           LL+++G  G   W+ L P++  +   G ++   +   V+  SP  G++ +  V  G  + 
Sbjct: 20  LLTVVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTFSP--GVVSRILVREGETVK 77

Query: 80  QGTPLLTFEDIET-TDLIDLKK------VSIKNLRCHIDTEKS---ALDFLNNKYDVLEK 129
           QG PL   +  +   D+  L+        S+   +   D   S     +  +N    L  
Sbjct: 78  QGQPLFRLDQTQNQADVQSLQAQYRLAWASVARWQSERDNRSSIHFPAELSSNPDPALAL 137

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             E + +          S+  + F    + +  ++     ++  +   R DL  ++  LR
Sbjct: 138 VLEGQRQ--------LFSSRREAFAREQAGIRANIDGATAQLGGMRRARSDLTAQAQSLR 189

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             LS+       ++ L +   + +N L + +R + +   +L +N  E   + + I E   
Sbjct: 190 DQLSN-------LQPLADNGYIPRNRLMEYQRQLSQVQQDLAQNTGESGRVEQGILESRL 242

Query: 250 EANLEFANYLKEISRDLEQNQ-RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +       Y KE+   L   Q R+   E  +LT      +   I +P  G  V     + 
Sbjct: 243 KLQQHSEEYQKEVRSQLADAQLRSLTLEQ-QLTSAGFDLQHSEINAPADGIAVNLGVHTE 301

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +  + L++IVP      +   +    +  V       + F  +   R  +    + 
Sbjct: 302 GAVVRAGETLLEIVPQGTRLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGEVS 361

Query: 369 KI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
            I  D ++ ++        YY +   ++D A      + ++ G PAE+       +L   
Sbjct: 362 LISADQMLDEKTGA----PYYVLRTTLSDAAEQKLQGLVIKPGMPAEMFVRTGERSLLNY 417

Query: 426 IIHPITD 432
           +  P+ D
Sbjct: 418 LFKPLLD 424


>gi|4115626|dbj|BAA36464.1| Membrane fusion protein (MFP) [Pseudomonas fluorescens]
          Length = 444

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 77/443 (17%), Positives = 163/443 (36%), Gaps = 35/443 (7%)

Query: 7   KNLKRNHPAS----LKRMT-LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           ++ ++ HP        RM  LL+++G  G   W+ L P++  +   G ++       +++
Sbjct: 11  RDYEQTHPEHGARFFARMGWLLTVVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQT 70

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIET-TDLIDLKK------VSIKNLRCHIDTEK 114
              G++ +  V  G  + QG PL   +  +   D+  L+        S+   +   D + 
Sbjct: 71  LSPGVVSRILVREGEAVKQGQPLFRLDQTQNQADVHSLQAQYRMAWASVARWQSERDNQS 130

Query: 115 S---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           +     +   N    L    E  + QL        S+  + F    + +  +++    ++
Sbjct: 131 TITFPAELSGNPDQALALVLEG-QRQLF-------SSRREAFAREQAGIRANIEGATAQL 182

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
             +   R DL  ++  LR         L  ++ L +   + +N L + +R + +   +L 
Sbjct: 183 NGMRRARSDLTAQAQSLR-------DQLNNLQPLADNGYIPRNRLMEYQRQLSQVQQDLA 235

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ-RTFADEMSKLTILEKTREQK 290
           +N  E   + + I E   +       Y KE+   L   Q R+   E  +LT      +  
Sbjct: 236 QNTGESGRVEQGILESRLKLQQHSEEYQKEVRSQLADAQLRSLTLEQ-QLTSAGFDLQHS 294

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +P  G  V     +     +  + L++IVP      +  ++    +  V       +
Sbjct: 295 EINAPADGIAVNLSVHTEGAVVRAGETLLEIVPQDTRLEVEGRLPVHLVDKVGTHLPVDI 354

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGF 409
            F  +   R  +    +  I     Q  +      YY +   ++  A    + + ++ G 
Sbjct: 355 LFTAFNQSRTPRVPGEVSLIS--ADQMLDEKTGMPYYVLRTTVSSSALEKLHGLVIKPGM 412

Query: 410 PAEVLFTAKNTTLAQEIIHPITD 432
           PAE+       +L   +  P+ D
Sbjct: 413 PAEMFIRTGERSLLNYLFKPLLD 435


>gi|325267643|ref|ZP_08134295.1| HlyD family type I secretion membrane fusion protein [Kingella
           denitrificans ATCC 33394]
 gi|324980993|gb|EGC16653.1| HlyD family type I secretion membrane fusion protein [Kingella
           denitrificans ATCC 33394]
          Length = 475

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 133/366 (36%), Gaps = 90/366 (24%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET- 92
           WS    I+I  ++SG+ ++      I+   + ++K   V +G  + QG  L+  E + T 
Sbjct: 72  WSWFGKIDIVAAASGKTVSGGRSKTIQPLETAVVKAVHVRDGQHVKQGETLVELEAVGTD 131

Query: 93  TDLID----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +D++     L+   +  LR                Y+ +  A ESR    +D        
Sbjct: 132 SDVVQSEQALQAAQLSKLR----------------YEAVLAALESRTVPHID-------- 167

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL--------------LRALLSS 194
                              + + RS+ L+  D+++   L              L++ L  
Sbjct: 168 -------------------MAQARSLGLSDADVQSAQILAQNQYQAWAAQDAQLQSALRG 208

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYK------------------STLELRENIHE 236
           HQ +L   K   E+  VS   + QQ+   Y+                   ++  R ++  
Sbjct: 209 HQAELQSAKAQ-EQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNRNDLES 267

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQ-KT 291
            +  +R I     +A        + + RD    L Q      D+    T   K R+Q  T
Sbjct: 268 TRGQMRQIQAAIAQAEQNRVLNTQNLKRDTLDALRQANEQI-DQYRGQTDKAKQRQQLMT 326

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP  GT+    +++     Q +Q +M + P      +   V  K I  V++G  A V+
Sbjct: 327 IQSPADGTVQELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVK 386

Query: 352 ---FPH 354
              FP+
Sbjct: 387 IESFPY 392


>gi|319785025|ref|YP_004144501.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170913|gb|ADV14451.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 458

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 20/199 (10%)

Query: 246 ELYDEANLEFANYLKEI-SRDLEQNQRTFA--DEMSKLTILEKTREQKTILSPIAGTIVY 302
           +L D+   +    L+E  ++  E N+R     DE++K           TI +P +GTI  
Sbjct: 272 QLDDQRRTDVTTELRETEAKQTELNERRIVAQDELTK----------TTIRAPQSGTIQE 321

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           +   +        + LM IVP +    + A + P ++  V+ G   ++RFP +       
Sbjct: 322 SAVHTVGGVIAPGEMLMTIVPDTDDLVVDALIPPSRVDDVRPGQPVSIRFPAFDVGTTPV 381

Query: 363 FKAIIEKIDP-IISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKN 419
            +  ++ I   +I      L    Y+   +K+       ++  + LR G PAEV      
Sbjct: 382 CQGSVKHISADLIKDPQRQL---SYFSARIKVESKSSCLTEAKV-LRPGMPAEVHIRTDE 437

Query: 420 TTLAQEIIHPITDNWPKIF 438
             +   ++ P  D   K F
Sbjct: 438 RNVWSYLLKPFADQMSKAF 456


>gi|127511245|ref|YP_001092442.1| HlyD family type I secretion membrane fusion protein [Shewanella
           loihica PV-4]
 gi|126636540|gb|ABO22183.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           loihica PV-4]
          Length = 460

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 75/367 (20%), Positives = 150/367 (40%), Gaps = 26/367 (7%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            + W+    ++   + +G+++    V  I+S   GI+K+  V  G  + +G PL+  +D 
Sbjct: 42  FLVWAYFAELDRVTTGTGKVIPSSQVQVIQSLDGGIMKELYVREGMTVTKGQPLVRIDDT 101

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE-----QLLDFLGKY 145
                   ++  + +L+ ++   ++ L    N   + + A + RE+     Q L F  + 
Sbjct: 102 RFRSDFAQQEQEVYSLQANVIRLRAEL----NSITISDVAADWREQVKIAKQPLQFPPEL 157

Query: 146 HSTCSKVFNYG---ISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRALLSSHQ---KD 198
             +   +        S    +L  +L  + R I   + + E  +S +  L +S Q   ++
Sbjct: 158 TESEHDLIERQRDEYSGRLDNLSNQLEILARQIQQKQQETEELASKINTLTTSFQLVTRE 217

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN- 257
           L + + L +K  V + +L + ER V     ++R  +   + +   +    DEA L+    
Sbjct: 218 LELTRPLADKGIVPEVELLKLERNVN----DIRGELSSLRLLRPKLKASQDEAILKRREA 273

Query: 258 ---YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYAQ 313
              Y  E    L + Q T    +++  +  + +  K  I+SP+ GTI      +     Q
Sbjct: 274 VFVYAAEARTQLNEMQ-TRLSRINEAQVGARDKVSKAEIVSPVNGTIKTVHINTLGGVVQ 332

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               +++IVP      I  K+ PK I  +  G  A V+   Y   R      ++E I   
Sbjct: 333 PGIDIIEIVPSEDQLLIETKIIPKDIAFLHPGLPAVVKVTAYDFTRYGGLNGVVEHISAD 392

Query: 374 ISQQDNN 380
            +Q +  
Sbjct: 393 TTQDEEG 399


>gi|312139112|ref|YP_004006448.1| branched-chain alpha/keto acid dehydrogenase component
          [Rhodococcus equi 103S]
 gi|311888451|emb|CBH47763.1| putative branched-chain alpha/keto acid dehydrogenase component
          [Rhodococcus equi 103S]
          Length = 370

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 16/59 (27%), Positives = 38/59 (64%), Gaps = 1/59 (1%)

Query: 31 LITWSILLPIEISVSSS-GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
          L++W++ +   + ++++ GE+      VE+ SPF+G++++  V+ G+ +  GTP++  E
Sbjct: 21 LVSWAVAVGDTVELNATIGEVETAKASVELPSPFAGVVRELLVQPGTTVPVGTPIIRVE 79


>gi|300312349|ref|YP_003776441.1| hemolysin-type secretion transmembrane protein [Herbaspirillum
           seropedicae SmR1]
 gi|300075134|gb|ADJ64533.1| hemolysin-type secretion transmembrane protein [Herbaspirillum
           seropedicae SmR1]
          Length = 386

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 81/438 (18%), Positives = 165/438 (37%), Gaps = 73/438 (16%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M  N ++N   S + +  LS+  ++ L+ W+ +  I+    + G+++       +++P  
Sbjct: 1   MEMNNEKNPLISAQWVLRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFE-DIETTDLIDLK------KVSIKNLRCHIDTEKSAL 117
           G +K+  V+ G  + QG  L+  E D   T L D +      ++S+  LR  +      L
Sbjct: 61  GPVKQILVKEGEAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEV--YGHPL 118

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +F               E  LLD+                       K  +   + +Y+ 
Sbjct: 119 NF---------------EPDLLDY-----------------------KEYIANQKDLYVK 140

Query: 178 R-LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           R + ++   + L+ +L    ++L M K+L     V + D+ + +R    +  ++R  I+ 
Sbjct: 141 RKILIDQDLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQR----NVADIRAQINN 196

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           ++N                  Y +E   D+ + Q     +  +L    +  E   + +P 
Sbjct: 197 KRN-----------------KYFQEALVDMTKVQEDLNTQREQLEDRTQVLEHTELKAPA 239

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   +  +     +    +M+I+P   L  + AKV+     +VK G  A V+   Y 
Sbjct: 240 DGVVKNIKVTTIGGVVRSGDVVMEILPVDNLI-VEAKVSTADSAYVKVGQAANVKLDAYD 298

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD---NNIELRNGFPAEV 413
                     +  + P     +       YY V + + +  F     + I+++ G  A V
Sbjct: 299 YSIYGTLNGHVVYVSPDTLLDETRQGAMPYYRVHIALEEAVFKGRKADAIQVKPGMTATV 358

Query: 414 LFTAKNTTLAQEIIHPIT 431
              A   T+   +  PI 
Sbjct: 359 EIKANTRTVLSFLTKPIA 376


>gi|220907173|ref|YP_002482484.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7425]
 gi|219863784|gb|ACL44123.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7425]
          Length = 486

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 23 LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
          L+I+ ++G + WSI   I  +VS  G ++    +VEI+SP +G +++ +VE G  + +G
Sbjct: 42 LAILVLVG-VGWSIWGQIPTTVSGRGVVIRPRRIVEIQSPIAGQLEELKVEVGDCVAKG 99


>gi|319944327|ref|ZP_08018601.1| HlyD family type I secretion membrane fusion protein [Lautropia
           mirabilis ATCC 51599]
 gi|319742288|gb|EFV94701.1| HlyD family type I secretion membrane fusion protein [Lautropia
           mirabilis ATCC 51599]
          Length = 440

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 17/199 (8%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SP 295
           Q  M   IN+      ++ AN L  +  +L Q Q        ++T        +T+L +P
Sbjct: 244 QAAMQERINKY----RVDAANDLSRVEAELAQVQEALTARQDQVT--------RTVLTAP 291

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +   +  +     Q  Q +M+I+P      + AK+ P ++  ++ G  ATV+   Y
Sbjct: 292 VHGIVKNIRMNTRGGVIQPGQDIMEIIPLEDQLLVEAKIRPHEVAFLRPGLPATVKISAY 351

Query: 356 ADIREKKFKAIIEKIDPIISQQD--NNLQTQEYYEVILKITD--LAFSDNNIELRNGFPA 411
                      +E I P   + D   +     YY V+++ T   L     ++ +  G  A
Sbjct: 352 DYAIYGGLHGKVELISPDTLRDDEQRSAGNDRYYRVLVRTTSSTLHAGGKDLPIIPGMTA 411

Query: 412 EVLFTAKNTTLAQEIIHPI 430
            V       T+   I+ PI
Sbjct: 412 AVEIRTGEKTVMDYILKPI 430


>gi|254474077|ref|ZP_05087469.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
 gi|211956773|gb|EEA91981.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
          Length = 400

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 24/160 (15%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I++P+ G +V  +  ++    +  + LM+I+P      I A +   +I +VK+G  A VR
Sbjct: 249 IVAPVRGIVVRMRYHTAGGVVESGKDLMEILPLQDELIIEASIQTTEIDNVKEGQKAMVR 308

Query: 352 FPHYADIREKKFKAIIEKIDPIISQ------------QDNNLQTQEYYEVILKITDLAFS 399
                        A+ ++I P++              +D      + Y+  +++      
Sbjct: 309 -----------LTALNQRITPMLDAKVIYVSADALRNEDPMSSMGDVYKARVQLDREKIP 357

Query: 400 DN-NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            + N +   G PAEV  T ++ T    ++ P+ D+  + F
Sbjct: 358 GHLNFKATPGMPAEVYITTRDRTFFDYLMEPVRDSMARAF 397


>gi|148657319|ref|YP_001277524.1| multidrug resistance efflux pump-like protein [Roseiflexus sp.
           RS-1]
 gi|148569429|gb|ABQ91574.1| Multidrug resistance efflux pump-like protein [Roseiflexus sp.
           RS-1]
          Length = 502

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 5/51 (9%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIK 104
           +++PF G+I    ++ G  +  GTPL+T  D     IETTDL +L  V ++
Sbjct: 389 LRAPFGGLIAAVNIKPGEYVTPGTPLITIGDPGAWQIETTDLTELSIVKVQ 439


>gi|78186559|ref|YP_374602.1| metalloprotease secretion protein [Chlorobium luteolum DSM 273]
 gi|78166461|gb|ABB23559.1| metalloprotease secretion protein [Chlorobium luteolum DSM 273]
          Length = 393

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 4/147 (2%)

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           +++ + SP +G +V  +  +        + +M+IVP  +   +   V P+ I  +  G  
Sbjct: 236 KRRELRSPASGQVVGLKVQTVGAVITPGETVMEIVPLDESLMLEVHVDPQLIDRISTGLP 295

Query: 348 ATVRFPHYADIREKKFKAIIEKI--DPIISQ-QDNNLQTQEYYEVILKITDLAF-SDNNI 403
           A VRF  +A         ++E +  D +  Q +D  +    YY   + +T     S    
Sbjct: 296 ADVRFYSFAHSPMMMVDGVVESVSHDLLFDQSRDPRMPGASYYLARISLTREGMQSLGTH 355

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            L+ G P +V+      +L   ++HP+
Sbjct: 356 RLQAGMPVQVVIKTGERSLLTYLLHPL 382



 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 30/65 (46%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           +IG  G + WS L P++  V  +G +        ++    GI++   V  G  + +G  L
Sbjct: 41  LIGFGGFLLWSALAPLDEGVPCNGSVTVSTKSKVVEHLHGGIVQAVHVHEGEMVDEGALL 100

Query: 85  LTFED 89
           LT  D
Sbjct: 101 LTLTD 105


>gi|299068851|emb|CBJ40092.1| putative multidrug resistance homolog transmembrane protein (emrA)
           [Ralstonia solanacearum CMR15]
          Length = 363

 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 14/106 (13%)

Query: 276 EMSKLTILEKTREQKT---------ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           E ++ ++L    E+ T         +++P++G +V  +S     YA+  QPL+ +VP   
Sbjct: 189 EKARASLLSAQAEKATADLNLSYARVIAPVSG-VVAQRSARVGGYARVGQPLLTLVPLDA 247

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           + Y+ A     Q+ HV+ G  AT+      ++R    K  +E + P
Sbjct: 248 V-YVEANFRETQLAHVRVGQPATITVDALPNVR---LKGRVESLGP 289


>gi|282599807|ref|ZP_05971942.2| RTX toxin transporter [Providencia rustigianii DSM 4541]
 gi|282567902|gb|EFB73437.1| RTX toxin transporter [Providencia rustigianii DSM 4541]
          Length = 405

 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 74/353 (20%), Positives = 150/353 (42%), Gaps = 55/353 (15%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           +G+   + WS    ++I  ++ G+++       I++     +++  VE+G  + QG PLL
Sbjct: 1   MGVFIALAWSYFGKLDIQATTQGKLIVSGRTQTIQAFELSRLQQIHVEDGQLVQQGDPLL 60

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           +         + +  V    L  H      A + L +   + ++  E   + +   L + 
Sbjct: 61  S---------VKVLGVDQDILSLHYQKNFHASEQLIHHALIHQQHIEDTPQYMQLSLTEQ 111

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR---ALLSSHQKDLTMM 202
             T  ++    I   Y +L  ++T    + LNR++   +   L+    L+ + +K L   
Sbjct: 112 KRT--QLSYQTIKKEYETLLNEITN--ELQLNRVNYHARERELKDINTLMGNIRKRLNAH 167

Query: 203 KNLFEKNAVSQNDLNQQER---------IVYKSTLELRENIHE--QKNMLRHINELYDE- 250
            +L +K  +SQ +  +QER            +S L + ++ H   Q+ + R   + Y E 
Sbjct: 168 NSLSQKQLISQKEFLEQERELLIAKKEKTTKQSELSILDSQHHSLQEKLERIKAQKYQEW 227

Query: 251 ------ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                 A  +F +  +E+ ++ E+NQ            LE  R      +P+ GT+    
Sbjct: 228 HEKAQQAEFKFVSLEQELIKNQERNQ------------LEVIR------APVDGTVQQIT 269

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           +++     Q +Q LM IVP++ +     K+  K I  +++G  A V+   FP+
Sbjct: 270 TYTLGAVLQPAQQLMVIVPNNHVQLAEVKILNKDIGFIQEGLKADVKIDAFPY 322


>gi|268590162|ref|ZP_06124383.1| RTX toxin transporter [Providencia rettgeri DSM 1131]
 gi|291314441|gb|EFE54894.1| RTX toxin transporter [Providencia rettgeri DSM 1131]
          Length = 442

 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 82/379 (21%), Positives = 164/379 (43%), Gaps = 82/379 (21%)

Query: 14  PASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P+ L     +SI +G+   +TWS    ++I  ++ G+++       I++     ++   V
Sbjct: 25  PSYLALYVAISISVGVFFAVTWSFFGKLDIQATTQGKLIVSGRTQLIQAFELSRLEHIHV 84

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE---- 128
            +G  + QG PL+T              V++      +D +  +L++ +N + V E    
Sbjct: 85  TDGQVVKQGDPLIT--------------VNV----LGVDQDILSLNYQHN-FHVAEILIY 125

Query: 129 KAFESRE--EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-----RSIYLNRLDL 181
           +A  S++  EQL  F     +  +++      + Y++ K++   +       I LN ++ 
Sbjct: 126 QALISQQPIEQLPLF-----NQLTELEQNNTRASYQTQKIEFDSLINELNNEIQLNTVNQ 180

Query: 182 ENKSSLL---RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV--------------- 223
           + +   L    +L+ + +K L    +L +K  +SQ +  +QER +               
Sbjct: 181 QARKDELLTINSLIVNIKKRLDAHHSLTKKQLISQKEFLEQERELLIAKKEKVTKLSELS 240

Query: 224 -----YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                Y++  E  + I  QKN  +  +E Y +A+ + A+  +E+ ++ E+NQ        
Sbjct: 241 ILKSQYQALNEKVDRIKAQKN--QEWDEKYKQADFKRASLEQELLKNKERNQ-------- 290

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               LE  R      +P+ GTI    + +     Q +Q LM IVP++ +     K+  K 
Sbjct: 291 ----LEIIR------APVDGTIQQLATHTIGAVLQPAQQLMAIVPNNHVQLAEIKILNKD 340

Query: 339 IQHVKKGYTATVR---FPH 354
           I  + +G  A V+   FP+
Sbjct: 341 IGFIHEGLRAEVKIDAFPY 359


>gi|238752185|ref|ZP_04613666.1| Hemolysin transport protein [Yersinia rohdei ATCC 43380]
 gi|238709556|gb|EEQ01793.1| Hemolysin transport protein [Yersinia rohdei ATCC 43380]
          Length = 461

 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 67/343 (19%), Positives = 140/343 (40%), Gaps = 19/343 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +R      + ++ ++ WSI+  ++I  S++G+++  ++   I+    G++    V +G +
Sbjct: 49  RRTAWFLALTLVMVLVWSIVGRLDIHASANGKVIVSEHSKVIQPLEPGMVTAIHVRDGDR 108

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +     L+    I     ID    +IK    H   E + +  L    D   + F      
Sbjct: 109 VTANQLLIELNPIGIDAEID----NIKQQAMHRRLEAARMTALLT--DTPLENFRVPAGS 162

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRS---LKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             + +    S   K FN   + + R    L +   +++S  +N   + N+  L++ +   
Sbjct: 163 PDEMVNSAKSLLIKEFNGHNAELARQESELAVNQAQLQSALVN---IANQKILMKNI--- 216

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           HQ+ L  ++ L +  +++Q +L  QER    +T E     +E   +      L       
Sbjct: 217 HQR-LRALQTLAKSKSIAQVELLVQEREWLNATAEASRFQNESAILQAKARHLTQTRWHY 275

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A   +     L +NQ        +L  L++ + Q+ + +P++G I      +       
Sbjct: 276 VAEKKRAYQEQLNKNQEVINQLRQELIKLKEKQRQQRLRAPVSGVIQQLAIHTLGGVVTT 335

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           +QPLM +VP +    +   +  K +  V+ G    V+   FP+
Sbjct: 336 AQPLMVLVPENAPLALDVMIQNKDVGFVRPGQGVEVKVDSFPY 378


>gi|307152559|ref|YP_003887943.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7822]
 gi|306982787|gb|ADN14668.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7822]
          Length = 591

 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 65/283 (22%), Positives = 129/283 (45%), Gaps = 46/283 (16%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQIL 79
           T+L++   +  I W+ + PIE  V ++G++  +  V EI++P  +G++K   +++G ++ 
Sbjct: 77  TILTVT--VASIAWAAIAPIEQVVQATGQLKPQGKVKEIQAPVNNGVVKDVLIKDGDRVE 134

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L+ F+    TD    +  S K +R  I  E    + L ++ DV     E+   QL 
Sbjct: 135 KGEVLVIFD----TDASKAEFQSYKKIRQAIVQENEFYEKLMSE-DVDPSQLEAAMNQLK 189

Query: 140 DFLGKYHSTCSK----------VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             L K  +T ++          +F Y +     ++K+   ++  +   R +L +++   +
Sbjct: 190 --LPKEVTTLARNRIALMTENQLFRYQLGETVANMKLNSEQLARLDAARKELGSRALAAK 247

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQ--ND---------LNQQERIVYKSTLELRENIHEQK 238
             ++   K LT  +     +A SQ  ND          NQ   +  KS+L++ + I+ Q 
Sbjct: 248 LEMAQLGKQLTQTQVQL-ADAKSQLINDRRVLEEIKTRNQDYLVQAKSSLDIEQKIYNQ- 305

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                I  L DE  L  A+Y       + + Q++  D ++ +T
Sbjct: 306 -----IAPLADEGAL--ASY------QINKQQQSVNDRIADIT 335



 Score = 40.4 bits (93), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 12/110 (10%)

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS----Q 316
           +++++L  N+   ++  S+++   +T + + I +PI+GT+   Q  +S  Y  Q+    +
Sbjct: 408 QLTKNLVDNRNKISEYDSQISRAAQTLKYQVIKAPISGTVFDLQ--ASPGYVPQAVSKPE 465

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR-----FPHYADIREK 361
           PL+KIVP          V  K I  V+KG  A +R     F  Y DI+ K
Sbjct: 466 PLLKIVPDDYFV-AEVDVINKDIGFVRKGMKADIRIDSFPFSEYGDIKGK 514


>gi|33864408|ref|NP_895968.1| hypothetical protein PMT2144 [Prochlorococcus marinus str. MIT
           9313]
 gi|33641188|emb|CAE22318.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9313]
          Length = 374

 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 1/73 (1%)

Query: 20  MTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           + L+S++G  + ++ WSI   + + +   G ++  +N+  ++S  +G +K+F+V  G  I
Sbjct: 31  LLLISLLGFSLSILLWSIFGRLPVRIEGRGVLVRTENLQWVQSEINGRLKEFKVNVGDCI 90

Query: 79  LQGTPLLTFEDIE 91
            QGTPL   + ++
Sbjct: 91  KQGTPLAVIDPVQ 103


>gi|323181121|gb|EFZ66655.1| hemolysin secretion protein D, plasmid [Escherichia coli 1180]
          Length = 318

 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 11/196 (5%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQ-----KDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           + + LN+  +E  ++L R  L  HQ     + L   K L  K AVSQ+ + +QE    ++
Sbjct: 78  KQLTLNKKIVERDAALARVSLYEHQVSQEGRKLNDFKYLLNKKAVSQHSVMEQENSYIQA 137

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             E    + +   + + I  + +E  LE   +  EI   +E+++++  + +     LEK 
Sbjct: 138 KNEHAVWLAQVSQLEKEIELVREELALETNIFRSEI---IEKHRKSTDNIVLLEHELEKN 194

Query: 287 REQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           R++K    I +P++GT+      +       ++ LM IVP + +  + A V  K I  ++
Sbjct: 195 RQRKASSFIKAPVSGTVQELNIHTEGGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQ 254

Query: 344 KGYTATVRFPHYADIR 359
            G    ++   Y   R
Sbjct: 255 PGQEVIIKVDAYPYTR 270


>gi|198284402|ref|YP_002220723.1| type I secretion membrane fusion protein, HlyD family
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218666271|ref|YP_002427069.1| type I secretion membrane fusion protein, HlyD family
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248923|gb|ACH84516.1| type I secretion membrane fusion protein, HlyD family
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518484|gb|ACK79070.1| type I secretion membrane fusion protein, HlyD family
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 465

 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 72/363 (19%), Positives = 147/363 (40%), Gaps = 60/363 (16%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFS-GIIKKFQVENGSQILQG------TPLLT 86
           WS L  I I  +++G+ +  D  V++  P S   +++  V +G  + +G       P +T
Sbjct: 64  WSYLGKINIVATATGQFI-PDGRVKVVQPLSTATVERIYVHDGETVHKGQLLVSLNPAIT 122

Query: 87  FEDIETTDLIDLKKVSIKNL---RCHID-TEKSAL---DFLNNKYDVLEKAFESREEQLL 139
             +++ T     ++++ +NL   R H   + +SA+      N +Y  +EKA ++ +E   
Sbjct: 123 QANLQATQ----QELAFRNLQQARIHAQLSGRSAIAPASGTNPEYIRMEKALQAAQE--A 176

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D+  +  +  S+                 T + S       L+N+ +LL   + +   D 
Sbjct: 177 DYQSRLQAAQSRA------------DQNATALNSARALAQSLQNQEALLHPQVVA---DA 221

Query: 200 TMMKN----LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD-EANLE 254
           ++ ++      E     Q +L  Q RI              Q ++ R++    +   ++E
Sbjct: 222 SLAQSGAIPRMEYENARQKELGLQSRIA-----------QNQGDIARYLQRQVEYRQDIE 270

Query: 255 F--ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              ANY   +   L +N ++     ++ T          + SP+ G +   Q  +  N  
Sbjct: 271 GIKANYHATLLHSLGENAQSLISLQAQQTHASHDLSLHELRSPVDGIV---QDLAVRNVG 327

Query: 313 Q---QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           +    +QP++ IVP      + A +    +  V  G TA V+   Y   +    + +++K
Sbjct: 328 EVVTAAQPVVSIVPSGTPLVVEAYLPDAHMAFVHVGQTARVKVSAYPFEQYGALQGVVQK 387

Query: 370 IDP 372
           I P
Sbjct: 388 ISP 390


>gi|170745558|ref|YP_001767015.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium radiotolerans JCM 2831]
 gi|170659159|gb|ACB28213.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium radiotolerans JCM 2831]
          Length = 442

 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 71/422 (16%), Positives = 167/422 (39%), Gaps = 59/422 (13%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID----- 97
           ++ ++G ++ E N+ +++ P  G++ +  ++ G+++  G  L+  +        D     
Sbjct: 51  AIIATGSLVVESNIKKVQHPTGGVVAELPIQEGARVQAGDLLVRLDATTARATYDGVTKS 110

Query: 98  LKKVSIKNLRCHIDTEKSALDFL--------------------NNKYDVLEKAFESREEQ 137
           L +++ +N R  ++ E+   D L                       +     A + ++ Q
Sbjct: 111 LWEIAARNAR--LEAERDGRDSLAIAPELEGAGPEVARIVDGERKLFRFRRDALQGQKAQ 168

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L + +G+ +         G++    + + +   +   Y    DL  K+ +    L+S Q+
Sbjct: 169 LRERIGQLNEEIK-----GLAEQAAAKEQETAIIGREYEGVEDLWKKNLIQLTRLTSLQR 223

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D++ +K   E+  +  N + Q +  V ++ L++   I  ++N+   + +   E   + A 
Sbjct: 224 DMSRLKG--ERGVLVAN-IAQTKGKVSETELQI---IQLEQNLRSDVAKELAENRAKAAT 277

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                   L + + T  D++ ++           I +P  G +      +        + 
Sbjct: 278 --------LTEQRITAFDQLQRI----------EIRAPQTGYVHELAVHTRGGVISPGEQ 319

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +M IVP++       +V P+ I  ++ G  A +RFP +      +    + +I   +S  
Sbjct: 320 IMLIVPNADSLVAEVRVAPQDIDRLQTGQAAGLRFPSFDQRTTPELNGRVVRIAADVS-- 377

Query: 378 DNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
           ++      YY V L +T    +  +  +L  G P E      + T+   +  P+ D   +
Sbjct: 378 EDKRTGSFYYLVRLGVTKEELNRLDGAKLMPGMPVEAFIRTADRTVLSYLTKPLVDQARR 437

Query: 437 IF 438
            F
Sbjct: 438 AF 439


>gi|23011020|ref|ZP_00051514.1| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 376

 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 64/364 (17%), Positives = 153/364 (42%), Gaps = 33/364 (9%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G+++ E ++ +++ P  G++ +  V  G ++  G  L+  ++ +T   +D+   ++  
Sbjct: 2   APGQLVVESDIKKVQHPTGGVVGQLLVREGQRVAAGDVLIRLDETQTRANLDIVLKAMDE 61

Query: 106 L---RCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           L   R   + E+  L  +    +++ +   ++   +L+D  G+     ++V   G     
Sbjct: 62  LAARRARDEAERDGLKAVAFPPELVSRIDSDASVTRLID--GESRLFAARV--AGREGQK 117

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L+ ++ ++R   +  L  +  +      L  H+  LT +++L+ KN V  + +   ER
Sbjct: 118 AQLRERVDQLRQ-EIAGLTKQAAAKDREIDLIGHE--LTGVRDLYAKNLVPLSRVTALER 174

Query: 222 IVYK----------STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
              +          ST   R  I E +  +  I++              E+ +DL + + 
Sbjct: 175 DAARLEGERGQLIASTASARGKIAETELQIFQIDQ----------EMRTEVGKDLAEIRG 224

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
            +++   K    E   ++  + +P  G +      +       S+P M IVP +    + 
Sbjct: 225 KWSELREKRVAAEDQLKRVELRAPQDGYVHQMTVHTVGGLVVPSEPAMLIVPAADQLLVE 284

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            +V P+ I +V+ G  A +RF  +      +    + ++   ++Q     Q+  +Y   +
Sbjct: 285 VRVQPQDIDNVRVGQKAVLRFSAFNTRTTPEIDGEVVRVSADVTQDPKTGQS--FYTARI 342

Query: 392 KITD 395
           +I+D
Sbjct: 343 RISD 346


>gi|146339657|ref|YP_001204705.1| putative signal peptide [Bradyrhizobium sp. ORS278]
 gi|146192463|emb|CAL76468.1| conserved hypothetical protein; putative signal peptide
           [Bradyrhizobium sp. ORS278]
          Length = 415

 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           ++ED    + SP++G + K     G  + QG PL     IE  D +  +   I  +   +
Sbjct: 91  VDEDRSTPVFSPYAGRVTKLLARPGETVRQGQPLFV---IEAADTVQAQNDFIAAI-TSM 146

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           +  KSALD  + +Y   +  FE R   L DF
Sbjct: 147 NKAKSALDLADIQYKRAKDLFEGRAIPLKDF 177


>gi|152996835|ref|YP_001341670.1| HlyD family type I secretion membrane fusion protein [Marinomonas
           sp. MWYL1]
 gi|150837759|gb|ABR71735.1| type I secretion membrane fusion protein, HlyD family [Marinomonas
           sp. MWYL1]
          Length = 443

 Score = 42.4 bits (98), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 85/426 (19%), Positives = 167/426 (39%), Gaps = 57/426 (13%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +   + W+    ++      G+++    V +I++   GI+K+   + G  +  G  L+T 
Sbjct: 41  VAAALVWANYTALDEVTVGEGKVIPSSQVQQIQNLEGGILKEINAKVGQVVDSGQVLMTI 100

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E+ E    +  ++    NL+      ++    L  K+D              + +  Y  
Sbjct: 101 ENTEALSSLREQQAESINLKVRATRLQAESYGLEPKFDP-------------EIMKDYPL 147

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNR--------------LDLENKSSLLRALLS 193
                       V R L +   R+ S+  N+              ++L+ K   L+   +
Sbjct: 148 V-----------VKRELDLYNNRLESLRTNQVGFQQQIEQKKQEIVELQAKLENLKQSYA 196

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN---IHEQKNMLRHINELYDE 250
             +++L + +  FE+ AVS+ +L Q ER V +   +L      I   ++ L+       E
Sbjct: 197 FSKEELALTRPAFEQGAVSRVELLQLERQVNQLQGDLEATQLAIPRARSALKEAQSKLSE 256

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTI-LEKTREQKTILSPIAGTIVYNQSFSSS 309
              +F    +E   DL    ++  D++ +  + LE    +  + SP+ G +   Q  +  
Sbjct: 257 GEAKFRADAQE---DL-TGVKSKLDQLRESNVSLEDKVSRTQVRSPVKGIVKQIQINTVG 312

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              +    L++IVP      I AKV P+ I  +K   +A V+   Y          ++E 
Sbjct: 313 GVIKPGMNLLEIVPIEDSLLIEAKVRPENIGFIKPDLSAVVKLSAYDFAIFGGLHGVVEN 372

Query: 370 I--DPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           I  D I+ ++ N+     +Y V ++ TD   L   +  + +  G  A V       TL  
Sbjct: 373 ISADTILDEEGNS-----FYLVRVR-TDKNYLGTKNAPLPIIPGMQATVDIITGKKTLLD 426

Query: 425 EIIHPI 430
            ++ PI
Sbjct: 427 YLLKPI 432


>gi|260222765|emb|CBA32651.1| hypothetical protein Csp_D33210 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 506

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 78/374 (20%), Positives = 147/374 (39%), Gaps = 50/374 (13%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           HPA  + M ++    +  LI W+    I++   + G ++  +    I+   +  ++   V
Sbjct: 63  HPAPRRIMAIICTCVVAALI-WAAFGKIDVVALAPGRVIVSERSKVIQPLEAATVRAIHV 121

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKK-----VSIKNLRCHIDTEKSALDFLNNKYDVL 127
           ++G ++ +G  L+  +  +        K      + + LR H     S    LN+     
Sbjct: 122 QDGQEVQEGQLLIELDSTQVGAEHSQNKQQWLAANSEKLRSH-----SLQRALNSGG--- 173

Query: 128 EKAFESREEQLLDFLGKYHSTCS-KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           + A   ++  L     K  S  S +     + + ++ ++ K  R+ +    R   E++  
Sbjct: 174 QPALAEQQSSLWCAATKIESCESWQTLRQQLQTEWQDIRSKRERLAATVQTR---ESQIQ 230

Query: 187 LLRALLSSHQKDLTMMKN-------LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           + +A ++  Q  L  +         L ++  VSQ+ L  + R         R++I  +  
Sbjct: 231 VSKAAINRLQSLLVTLNQREVDYAALAQQGFVSQHGLQDKTRD--------RQDIDNE-- 280

Query: 240 MLRHINEL------YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +LR   EL      + EA  E   YL EI + L Q Q T   E+ +L   +   +Q+  L
Sbjct: 281 LLRVRAELTTAMSAHQEALKEQNAYLAEIQKSLAQRQFTAQQEIERLAQEQVKSQQRLEL 340

Query: 294 ----SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
               SP+ GT+     F++      +Q LM IVP +        V  K I  +  G    
Sbjct: 341 LQLRSPVKGTVQQLAVFTAGGVVTPAQALMVIVPAAHDISAEVMVANKDIGFIHTGQKVR 400

Query: 350 VR-----FPHYADI 358
           ++     F  Y  I
Sbjct: 401 IKLETFNFTRYGTI 414


>gi|262403121|ref|ZP_06079681.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio sp. RC586]
 gi|262350620|gb|EEY99753.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio sp. RC586]
          Length = 463

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 81/436 (18%), Positives = 174/436 (39%), Gaps = 41/436 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + +    ++  +  I W+    I+      G+++    V  I++   G++K+  
Sbjct: 27  NTPHSARIILWAMVLFFVLAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  L+  +D         ++  + NL  ++    +++  +     ++++ F
Sbjct: 87  VREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTANVLQLSASISSV-----IIDENF 141

Query: 132 ESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLR 189
           + +     ++        SK+ F   +S     L   + R R  Y   LD L N+ S+L 
Sbjct: 142 DEK-----NWTNSVRLDYSKLAFPPVLSDSQPEL---VERQRDQYRQDLDNLRNQLSVLS 193

Query: 190 ALLSSHQKDLTMMK----NLFEKNAVSQNDLNQQERIVYKST------LELRENIHEQKN 239
             +   Q+D    +    NL +    ++ +L+  E +  +        L+L+  +++ + 
Sbjct: 194 QQIKQKQQDRVEAEARVINLRQSYDFAKKELDITEPLANEGVVPKIELLKLQRQLNDTRR 253

Query: 240 MLRH-------INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTRE 288
            L         +     EA L   N  ++   + +       D++S +T     LE    
Sbjct: 254 ELTSTELKIPVLKAAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSAMTESAVGLEDKVN 313

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A
Sbjct: 314 RTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPA 373

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRN 407
            V+F  Y   R    +  +E I    +Q +   +   +Y V ++  +     D N+ +  
Sbjct: 374 IVKFTAYDFTRYGGLEGTLEHISADTTQDE---EGNSFYLVRVRTKETTLGHDKNLPIIP 430

Query: 408 GFPAEV-LFTAKNTTL 422
           G    V + T K T L
Sbjct: 431 GMTTSVDIITGKRTVL 446


>gi|154148902|ref|YP_001406984.1| putative membrane-fusion protein [Campylobacter hominis ATCC
           BAA-381]
 gi|153804911|gb|ABS51918.1| putative membrane-fusion protein [Campylobacter hominis ATCC
           BAA-381]
          Length = 434

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 73/347 (21%), Positives = 142/347 (40%), Gaps = 52/347 (14%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE-D 89
           L+ W +   I+I VS +G+++   N+  +K   +GII K  V  G ++ +  PL+  +  
Sbjct: 44  LVLWLVFAKIDIVVSGNGKVIPSGNIKILKPLENGIISKILVYEGQKVSKNEPLIIIDPS 103

Query: 90  IETTDLI----DLKKV--SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           +   +LI     LK +  SIK L     +EK            L+K      +++  ++ 
Sbjct: 104 VSKVNLITQEEKLKALNFSIKRLELLSFSEK------------LQKDANLSSDEMNLYIN 151

Query: 144 KYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           +  +    +   N+ IS +  S+      +           +K S L+ L     K+L  
Sbjct: 152 QKQNFDESIDELNFKISGILNSINGTQAEI-----------SKLSELKILADKRVKNLKN 200

Query: 202 MKNL-----FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++++     +E     Q DLN Q +   ++ L L+  + E K  L +          + A
Sbjct: 201 VRDIIASKDYEDALSKQIDLNSQIKSTNENLLALKSKLSETKKTLENFK------TSQKA 254

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            +L E    L   Q+  A+  + +  L    +Q+ + SP+ G +      +  +     +
Sbjct: 255 KFLDE----LLTKQKEAAEIKASINALNFQTKQQIVASPVDGYVGKLLIHTVGSSVSSGE 310

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR-----FPHYADI 358
            L+ I+P ++   I AK+  K I  ++ G    ++     F  Y  I
Sbjct: 311 ELISIIPANEPLIISAKILNKDIGFLQNGQKVAIKVDTFNFQKYGKI 357


>gi|16330856|ref|NP_441584.1| HlyD family secretion protein [Synechocystis sp. PCC 6803]
 gi|1653350|dbj|BAA18264.1| HlyD family of secretion proteins [Synechocystis sp. PCC 6803]
          Length = 583

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 1/75 (1%)

Query: 19  RMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R   ++I+G+ +  +TW+ +  IE  V ++G++   D V +I +P +G++K+  VEN  +
Sbjct: 64  RGIAIAIMGVTVVAVTWASIATIEQVVPATGQLKPLDTVKDINAPLNGVVKEVLVENNRK 123

Query: 78  ILQGTPLLTFEDIET 92
           + +G  L+  +   T
Sbjct: 124 VKKGEVLVIMDSSST 138


>gi|88657065|gb|ABD47314.1| PrsE [Rhizobium leguminosarum bv. trifolii TA1]
          Length = 433

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 80/431 (18%), Positives = 167/431 (38%), Gaps = 31/431 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +LSI  + G+  W+    +  +V   G I+ +     I+    GI+ +  V     + 
Sbjct: 19  VGVLSIALVCGIGGWAATTELSSAVIGEGVIVVDPRCQNIQHLTGGIVSELLVSENDHVT 78

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            G  L+  +   T   + + + ++  L   R  +  E+   +    + ++ +    +  +
Sbjct: 79  AGQVLIRLDGTTTRANLSIVESTLAQLYARRARLKAERIGAESFEVEENITDLTSSTSAQ 138

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +LLD   K   +       G+ S   S K +L       + +++  N S      L   +
Sbjct: 139 KLLDGEQKLFDSRRSAL-IGMKSQLASRKDQLAEQIKGLVVQINATNDS------LGLIE 191

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF- 255
           ++L  +  L++K  V+ +  + Q         +   N  +     + I    D  +++  
Sbjct: 192 EELGGIDVLYKKGLVTLHFESAQAGTCRSPGQQRPGNCSKGGGEGKAIE--IDRQSIQLD 249

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS------ 309
            +   EI++DL        D  +++   E+  E ++I   ++ +   +++ S +      
Sbjct: 250 EDRRSEIAKDL-------TDVEAQIAEYEERAEPRSISCTVSTSRAADRTSSRAFVHTVN 302

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                 Q LM +VP +    + AKV  + I  V  G +  VRF  +           I  
Sbjct: 303 GVIDPGQTLMLVVPENNELTVEAKVATRDIDQVHVGQSVDVRFSAFDQRTTPDVSGEITS 362

Query: 370 IDP-IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEII 427
           I P I+  +   +    YY + +K    + +    I+L  G PAEV     + T+   + 
Sbjct: 363 IAPDIVKDERTGIS---YYPLRVKPKPESIARMKTIKLYPGMPAEVFIKIGDRTVISYLT 419

Query: 428 HPITDNWPKIF 438
            P+TD    +F
Sbjct: 420 KPLTDQMQHVF 430


>gi|222082264|ref|YP_002541629.1| protein secretion protein [Agrobacterium radiobacter K84]
 gi|221726943|gb|ACM30032.1| protein secretion protein [Agrobacterium radiobacter K84]
          Length = 436

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 83/435 (19%), Positives = 166/435 (38%), Gaps = 39/435 (8%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           T+L + GI+G +  +    I  +V SSG ++ + +V  ++    GI+    V+NG ++  
Sbjct: 23  TILLLFGIMGGLAAAT--KISGAVISSGSLVVDSHVKPVQHLKGGIVSAINVKNGDRVDA 80

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHID----------TEKSALDFLNNKYDVLEKA 130
           G  L+  +D +T       + S+   R  ++           E+   D +    D+L  A
Sbjct: 81  GQVLIRLDDTQT-------RASLAIFRKRLNELAARTARLAAERDGKDAIAFPADLLANA 133

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                + +L       +   ++FN  ++S          R++ +      L  +    R 
Sbjct: 134 GNDDVKNIL-------AGEQRLFNDRLASRQGQKSQLRERVQQLKQEVEGLVAQEKGKRV 186

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            +    K+L  ++ L ++  +S   +   +R   + T EL   +      +   N    E
Sbjct: 187 EIQLVGKELGSLQQLLDQGIISATKVYSLQRDSARLTGELGNLVSS----IAQTNGKITE 242

Query: 251 ANLEFA----NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             L+      +   E+S  L Q +        +L  +E   ++  I +P AG +      
Sbjct: 243 TELQIIQIDNDRSSEVSDQLRQAESDTGQFSERLIAVEDDLKRIDIRAPQAGIVDQLNVH 302

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           ++      ++ +M+IVP         K+ P  I  V  G    +RF  +      +    
Sbjct: 303 AAGAVIGPAETIMQIVPDKDALVAELKLAPLDIAQVAVGQVVALRFSAFNQRITPELNGR 362

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR--NGFPAEVLFTAKNTTLAQ 424
           +E I   ++   ++   Q YY V  K +   + D   EL    G P E      + ++  
Sbjct: 363 VETISADLTTDQHS--GQSYYVVRAKASKEEW-DRLGELTPLAGMPVEAFMQTGSRSVLA 419

Query: 425 EIIHPITDNWPKIFE 439
            +  P+TD   + F+
Sbjct: 420 YLTKPMTDQIKRAFK 434


>gi|148254433|ref|YP_001239018.1| hypothetical protein BBta_2988 [Bradyrhizobium sp. BTAi1]
 gi|146406606|gb|ABQ35112.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 416

 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           ++ED    + SP++G + K     G  + QG PL     IE  D +  +   I  +   +
Sbjct: 92  VDEDRSTPVFSPYAGRVTKLLARPGETVRQGQPLFV---IEAADTVQAQNDFITAI-TSM 147

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           +  KSALD  + +Y   +  FE R   L DF
Sbjct: 148 NKAKSALDLADIQYKRAKDLFEGRAIPLKDF 178


>gi|330944351|gb|EGH46395.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 473

 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 79/365 (21%), Positives = 154/365 (42%), Gaps = 39/365 (10%)

Query: 13  HPASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           HPA   R+ + +II    L+  W+ +  I+I  +++G+++       I+S  + +++   
Sbjct: 52  HPAP--RIFIWAIILFATLLLIWACVGKIDIVATANGKVIPSGKTKIIQSSETAVVRAIY 109

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA--LDFLNNKYDVLEK 129
           V +G  +  G  LL  +   T+   D+ K+    L   ID+ ++   LD +N  +     
Sbjct: 110 VNDGQVVKAGQLLLELDS--TSADADVGKIESDLLAARIDSARAGAMLDAINGNH----- 162

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLL 188
           A  S  + +L      H   ++ +  G    YRS    L +  +  L R  D++      
Sbjct: 163 APRSLADTILGG-DPEHVLAAERWLQGQYQEYRS---NLEQGETEILQRQADIQAA---- 214

Query: 189 RALLSSHQKDLTMM-------KNLFEKNAVSQNDL--NQQERIVYKSTLELRENIHEQKN 239
           RA ++S QK L +        ++L +K  ++++     +Q R+  +  L +++    Q N
Sbjct: 215 RAQVASLQKTLPIATKLAQDYEHLLQKQYIARHAYLEKEQARLDLERQLAVQQISVLQSN 274

Query: 240 MLRHINELY-DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             R   E   D    +    + ++ +  +Q   + + E+SK    E   +  T+ +P+ G
Sbjct: 275 AARQQAERRRDGVVAQTRRAMLDLLQQADQKVASLSQELSKARYQE---DLTTVEAPVDG 331

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR-----FP 353
           T+      +       +QPLM +VP      + A +  K +  V  G   TV+     F 
Sbjct: 332 TVQQLNIHTVGGVVTPAQPLMMLVPSDVSVEVEAMLENKDVGFVHVGQDVTVKVETFTFT 391

Query: 354 HYADI 358
            Y  I
Sbjct: 392 KYGTI 396


>gi|307152179|ref|YP_003887563.1| hypothetical protein Cyan7822_2310 [Cyanothece sp. PCC 7822]
 gi|306982407|gb|ADN14288.1| hypothetical protein Cyan7822_2310 [Cyanothece sp. PCC 7822]
          Length = 382

 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)

Query: 18 KRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
          +R  L  I+ +IGL I+W I + +E  V   GE+   + V  I+ P   +I++  V+ G 
Sbjct: 24 QRAILCLILAVIGLAISWLIFVKVEPVVFLLGELQPIETVERIELPQDSVIEEIYVQPGE 83

Query: 77 QILQGTPLLTFE 88
          Q+ QG  LL+F+
Sbjct: 84 QVQQGQELLSFD 95


>gi|157377273|ref|YP_001475873.1| HlyD family type I secretion membrane fusion protein [Shewanella
           sediminis HAW-EB3]
 gi|157319647|gb|ABV38745.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           sediminis HAW-EB3]
          Length = 460

 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 77/379 (20%), Positives = 146/379 (38%), Gaps = 50/379 (13%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            + W+    ++   +  G+++    +  I+S   GI+++  VE G  + +G  L+  +D 
Sbjct: 42  FVLWAYFSKLDQVTTGMGKVIPSSQIQVIQSLDGGIMQELYVEEGMHVTKGQALVRIDDT 101

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSAL------DFLNN--------------KYDVLEKA 130
                 D ++  + +L+ ++   ++ L      D  +N                +++EK 
Sbjct: 102 RFRSEFDQQEQEVFSLQANVKRLEAELNSIIISDMSSNWREQVKITKTPLLFSGELIEKE 161

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            E  + Q  ++ G+  S  +++                   R I   + + E  +S +  
Sbjct: 162 PELVKRQSEEYSGRMDSLSNQLEILA---------------RQIQQKQQETEELASKINT 206

Query: 191 LLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR-HINE 246
           L  S Q   ++L + K L EK  V + +L + ER V     EL         +LR  +  
Sbjct: 207 LTRSFQLISRELELTKPLAEKGIVPEVELLKLERTVNDIQGEL-----SSLRLLRPKVKA 261

Query: 247 LYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIV 301
             DEA L+       +  E    L + Q   +  MS+  +  + +  K  I SP+ GTI 
Sbjct: 262 SQDEAILKRREAVFVFAAETRTQLNEMQTKLS-RMSEAQVGAQDKVSKAEITSPVNGTIK 320

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +     Q    +++IVP      I  K+ PK I  +  G  A V+   Y   R  
Sbjct: 321 SIHITTLGGVVQPGIDILEIVPSEDQLLIETKIVPKDIAFLHPGLPAVVKVTAYDFTRYG 380

Query: 362 KFKAIIEKIDPIISQQDNN 380
               ++E I    +Q +  
Sbjct: 381 GLNGVVEHISADTTQDEEG 399


>gi|91790748|ref|YP_551699.1| secretion protein HlyD [Polaromonas sp. JS666]
 gi|91700628|gb|ABE46801.1| secretion protein HlyD [Polaromonas sp. JS666]
          Length = 349

 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 18/89 (20%), Positives = 46/89 (51%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           L+ ++G+ G + W+ + P++  V  SG ++++ N   ++ P  GI+ +  V+ G  + +G
Sbjct: 28  LVVLLGVGGFLLWASIAPLDKGVPVSGTVISDGNRKSVQHPTGGIVDQMLVKEGDTVTEG 87

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             +      + T  ++  + ++  L+  I
Sbjct: 88  QLVARLNTTQATANLNASRETVLGLQMQI 116


>gi|225853742|ref|YP_002735254.1| hypothetical protein SPJ_0142 [Streptococcus pneumoniae JJA]
 gi|225722642|gb|ACO18495.1| conserved hypothetical protein [Streptococcus pneumoniae JJA]
          Length = 450

 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 2/178 (1%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           K+M R  N+   +A   +A  + E+      N ++  +  + L +     +  +IL+P  
Sbjct: 252 KDMNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQDKAHSILAPNE 311

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+ Y          QQ Q + ++    K  Y+ A V    I  V KG  A V       
Sbjct: 312 GTLHYLLPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKADVAITGVNS 371

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEV 413
            +    K  + +ID     Q+        Y+V++++  L        + L+   P EV
Sbjct: 372 QKYGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVVLQKDMPVEV 429


>gi|123442270|ref|YP_001006251.1| hemolysin transport protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122089231|emb|CAL12077.1| hemolysin transport protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 464

 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 69/329 (20%), Positives = 145/329 (44%), Gaps = 23/329 (6%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WSI   ++I  S++G+++  ++   I+S   G++    V +G +++ G  LL    I   
Sbjct: 68  WSIAGRLDIHASANGKVIVAEHSKIIQSLEPGVVVAINVHDGDRVVAGQVLLELNPIG-- 125

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +D +  +I     H   E + +  L    D LE  F   +    + +    S   K +
Sbjct: 126 --VDAEVNNINQQLMHRSLEAARMSALLTD-DPLEN-FIYPDNSPENLVITAKSLLVKEY 181

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +   + + R    +      I     ++ +  +L++ +   HQ+ L  ++ L +  A+++
Sbjct: 182 DEVNAELARQDSERAVNQAYIQAGSTNITHHKALMKNI---HQR-LQALQTLVKSKAIAE 237

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++  QER    ++ E    +  ++ +LR   ++ + A +   +YL E  R  ++     
Sbjct: 238 AEVLIQEREWLNASAE-GNRLESEQVVLR--AKMRNLAQVRL-HYLAEKKRSYQEQLNKA 293

Query: 274 ADEMSKLT-----ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            + +++L      ++EK R+Q T+ +P+AG I  +   +       +QPLM +VP S   
Sbjct: 294 HEVINQLKQELVKLMEKQRQQ-TLRAPVAGVIQQSTVHTLGGVVTSAQPLMVLVPESHQL 352

Query: 329 YIRAKVTPKQIQHVKKGYTATVR---FPH 354
            +   +  K I  V  G    V+   FP+
Sbjct: 353 ELDVMILNKDIGFVLPGQAVEVKIDSFPY 381


>gi|103488236|ref|YP_617797.1| Type I secretion membrane fusion protein, HlyD [Sphingopyxis
           alaskensis RB2256]
 gi|98978313|gb|ABF54464.1| Type I secretion membrane fusion protein, HlyD [Sphingopyxis
           alaskensis RB2256]
          Length = 421

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 80/440 (18%), Positives = 176/440 (40%), Gaps = 53/440 (12%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W+ L+ +      ++ + + +G++  + W+ +  ++      G ++    V  I+S    
Sbjct: 9   WQRLRGSE-----QIMVAAAVGLVLFLLWASIARVDEISRGQGRVIPSSRVQIIQSAEPS 63

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I++  V +G  + +G  L+  ++  TT   +L ++  +N R      + A +  +    
Sbjct: 64  TIREILVRSGQTVEKGQLLVRLDN--TTSQSELGQLETENERLAQRAARLAGEGGSGA-- 119

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS-LKMKLTRMR-SIYLNRLDLEN 183
                            G    +C       ++ V RS L+ +L  +  S+   R DL  
Sbjct: 120 -----------------GCTGDSCGD--EARLAEVRRSALQSQLAALSASVEQRRRDLGE 160

Query: 184 KSSLLRALLSS---HQKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLEL-RENIHEQ 237
             +   AL SS    ++ + M++ L  +  V Q +L   Q+E +  +  L   R+ +   
Sbjct: 161 AQATASALESSLRLAREQVAMLEPLAARGVVPQTELLTAQREVVDIQGRLAAARQAMSRS 220

Query: 238 KNMLRHINELYDEANLEFA----NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +  +R  +     A  +F     N   +++  +  N+ T      +L        +  I 
Sbjct: 221 QAAIREASAEVSRARFDFQQEALNERSQLTTKMAVNEETIRGAEGRLA-------RSEIR 273

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP  G +      +   +    + +M+IVP      I  +VTP+ I  +K G  A V+  
Sbjct: 274 SPARGVVNDLLVNTLGGFVNAGEQIMQIVPLGDKLLIETRVTPRDIAFIKVGDPANVKVT 333

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPA 411
            Y        K  + ++ P      + ++ + Y+ V+++ T+  L  +   + +  G   
Sbjct: 334 AYDFSIYGGLKGKVVRVSP--DSIYDEVEREAYFTVVVETTNSFLVSNGRRLPITPGMLC 391

Query: 412 EV-LFTAKNTTLAQEIIHPI 430
           +V + T K + L+  ++ P+
Sbjct: 392 DVEILTGKKSVLSY-LLKPV 410


>gi|54302264|ref|YP_132257.1| HlyD family secretion protein [Photobacterium profundum SS9]
 gi|46915685|emb|CAG22457.1| putative secretion protein, HlyD family [Photobacterium profundum
           SS9]
          Length = 476

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 89/443 (20%), Positives = 171/443 (38%), Gaps = 78/443 (17%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + ++  I  I W+ +  ++     +G+++    +  +++   GI+KK  
Sbjct: 38  NTPHSARIMLWVMVLFFIVAIAWASVAELDKVTVGTGKVIPSSQLQIVQNLEGGIVKKVL 97

Query: 72  VENGSQILQGTPLLTFEDI--------ETTDLIDLKKVSIK-----------------NL 106
           ++ G  + Q   LL  +D          T +L   +  SI+                 N 
Sbjct: 98  IKEGQHVEQNQKLLLIDDTLFRSDFRERTQNLAGSQADSIRLNALLNSVTVNKKNANSNW 157

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL-GKYHSTCSKVFNYGISSVYRSLK 165
           R  +D E + L F  N        FE + ++L+     +Y    S + N  +S + + + 
Sbjct: 158 RKSVDVEDNILKFDAN--------FEEKHKRLVQRQKNEYEDKISNIQNQ-LSGMAQQIS 208

Query: 166 MKLTRMRSIYLNRLDLENKSSL--LRALLSSHQKDLTMMKNLFEKNAVS-------QNDL 216
            K          R  +E KS +  LR   +   K+  + K L ++  V        Q  L
Sbjct: 209 QK---------ERELIETKSRVNNLRRSYNIASKEYNITKPLADEGVVPKIELLKLQRQL 259

Query: 217 NQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           N  +R +  + L++   +  I E   + ++IN          +N+  E   +L +     
Sbjct: 260 NDTKRELTSAELQIPVTQATIQEV--IFKYINIA--------SNFRSEAQAELNETSDQL 309

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
              +     L+    +  +LSP+ GTI      +     Q    L++IVP      I AK
Sbjct: 310 DGLLESQVGLKDRVNRTVVLSPVTGTIQKIYVNTVGGVIQPGMDLVEIVPSEDNLLIEAK 369

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVIL 391
           + P+ I  ++      ++F  Y           +E I  D I  ++ N+     YY+V +
Sbjct: 370 IAPQDIGFLRPDLPVMLKFSAYDFTVYGGLSGYLETISADTIQDEEGNS-----YYQVRI 424

Query: 392 KITDLAFSDNNIELRNGFPAEVL 414
           +       DN ++  +G P  ++
Sbjct: 425 RT-----EDNTLKGPDGEPLPII 442


>gi|189347749|ref|YP_001944278.1| type I secretion membrane fusion protein, HlyD family [Chlorobium
           limicola DSM 245]
 gi|189341896|gb|ACD91299.1| type I secretion membrane fusion protein, HlyD family [Chlorobium
           limicola DSM 245]
          Length = 389

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 99/240 (41%), Gaps = 26/240 (10%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +++L+MM  L E   V + ++ + +R V + T ++        NM R  N+ + +A  E 
Sbjct: 162 KEELSMMAPLLESGDVGKIEVIRLQRQVAELTGQI--------NMKR--NKFFQDAQQEM 211

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y      DL   ++  A+    +  L+       + +P+ G +      +     +  
Sbjct: 212 TKY----EEDLSTQKQLLAERSFVVGKLD-------VRAPVTGIVKKIHLTTQGAKVRPG 260

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-II 374
             +M+++P      +  K+ P  I  VK G  ATV+   Y           +  I P  I
Sbjct: 261 DIVMELLPTEGNLIVEGKLKPSDIGFVKPGMAATVKVDAYDYSIYGVLHGKVSYISPDAI 320

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRN---GFPAEVLFTAKNTTLAQEIIHPIT 431
           ++Q    +   YY V +K+TD + S + I L N   G    +     + T+ Q +  PIT
Sbjct: 321 TEQTPQGEAL-YYRVHVKLTDESTSQSKISLANLQPGMTVGIDIRTGSKTVLQYLTKPIT 379


>gi|149916317|ref|ZP_01904837.1| secretion protein, HlyD family [Roseobacter sp. AzwK-3b]
 gi|149809771|gb|EDM69623.1| secretion protein, HlyD family [Roseobacter sp. AzwK-3b]
          Length = 434

 Score = 42.0 bits (97), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 2/101 (1%)

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
           LE+   +  I +P+AG I      +   Y      ++++VP  +   I AK+ PK I ++
Sbjct: 277 LEERVSRTVIRAPMAGIINRLNFRTPGGYVNTGDVVLELVPTGEALVIEAKIAPKDISNI 336

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNL 381
           +      +RF  Y   +       + +I P  I+ QQ+  L
Sbjct: 337 RPEDAVRIRFSAYDSAKYGTVDGRVLRISPDAIVDQQNQGL 377


>gi|312877851|ref|ZP_07737798.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311795355|gb|EFR11737.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 270

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 81/183 (44%), Gaps = 33/183 (18%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           IIGL+ WSI+  I+I+V   G I   ++   I S   G +K+  V+ G  + +G  L   
Sbjct: 37  IIGLVLWSIVGEIDINVKVQGIIRPWEDEARIISYVGGKVKEIFVKEGEYVKKGEVLFKI 96

Query: 88  EDIETTDLIDL---------KKVS-IKNLRCHIDTEKSALDFLNNKYDV----------- 126
           +D E     DL         KKVS +K LR  I+ ++S    L NK +V           
Sbjct: 97  DDEEYVKKRDLLKQQLREYEKKVSDLKELRKSIEKDES----LRNKNNVYYLRYLSYSYE 152

Query: 127 ---LEKAFES----REEQLLDFLGKYHSTCSKVFNYG-ISSVYRSLKMKLTRMRSIYLNR 178
              L+KA E     RE  ++DF  +  S   K+ N     S  + +K  + +   I L +
Sbjct: 153 VNKLKKAAEEERVQREYSIMDFKKQIESLEEKIKNIDKFESTLKEIKEIVDKGEQIKLAK 212

Query: 179 LDL 181
            D+
Sbjct: 213 YDI 215


>gi|301510593|ref|ZP_07235830.1| Leukotoxin secretion protein D [Acinetobacter baumannii AB058]
          Length = 392

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 85/219 (38%), Gaps = 34/219 (15%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R DLE   S LR  L   Q++L M + L  K A S                   E +  +
Sbjct: 153 RADLEQTLSGLRQALQLVQQELAMTEPLVAKGAAS-------------------EGLRRE 193

Query: 238 KNMLRHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTIL- 293
            N L+  N++ D  N  +    +E+S+   D +  Q+        L        Q+ +  
Sbjct: 194 ANDLQ--NKMNDARNQYYVKAREELSKANTDTQTQQQVVMGRNDSL--------QRAVFK 243

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P+ G +      +      Q+  LM IVP  +   I A++ P+ I  ++ G  A V+  
Sbjct: 244 APVRGVVKEITVTTHGGVIPQNGKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKIT 303

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            Y        K  +  I P  + +D   Q Q YY V ++
Sbjct: 304 AYDYSIYGGLKGKVTVISP-DTIRDEVKQDQFYYRVYIR 341


>gi|149001800|ref|ZP_01826773.1| hypothetical protein CGSSp14BS69_08730 [Streptococcus pneumoniae
           SP14-BS69]
 gi|237650847|ref|ZP_04525099.1| hypothetical protein SpneC1_09049 [Streptococcus pneumoniae CCRI
           1974]
 gi|237821338|ref|ZP_04597183.1| hypothetical protein SpneC19_03302 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147760258|gb|EDK67247.1| hypothetical protein CGSSp14BS69_08730 [Streptococcus pneumoniae
           SP14-BS69]
          Length = 450

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 69/178 (38%), Gaps = 2/178 (1%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           K+M R  N+   +A   +A  + E+      N ++  +  + L +     +  +IL+P  
Sbjct: 252 KDMNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQDKAHSILAPNE 311

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+ Y          QQ Q + ++    K  Y+ A V    I  V KG  A V       
Sbjct: 312 GTLHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKADVAITGVNS 371

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEV 413
            +    K  + +ID     Q+        Y+V++++  L        + L+   P EV
Sbjct: 372 QKYGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVVLQKDMPVEV 429


>gi|108807605|ref|YP_651521.1| hypothetical protein YPA_1610 [Yersinia pestis Antiqua]
 gi|108811881|ref|YP_647648.1| hypothetical protein YPN_1719 [Yersinia pestis Nepal516]
 gi|145598181|ref|YP_001162257.1| hypothetical protein YPDSF_0884 [Yersinia pestis Pestoides F]
 gi|167468562|ref|ZP_02333266.1| hypothetical protein YpesF_11834 [Yersinia pestis FV-1]
 gi|229894937|ref|ZP_04510115.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis Pestoides A]
 gi|229897679|ref|ZP_04512835.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229898324|ref|ZP_04513471.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229902184|ref|ZP_04517305.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis Nepal516]
 gi|270490656|ref|ZP_06207730.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294503718|ref|YP_003567780.1| hypothetical protein YPZ3_1608 [Yersinia pestis Z176003]
 gi|108775529|gb|ABG18048.1| hypothetical protein YPN_1719 [Yersinia pestis Nepal516]
 gi|108779518|gb|ABG13576.1| hypothetical protein YPA_1610 [Yersinia pestis Antiqua]
 gi|145209877|gb|ABP39284.1| hypothetical protein YPDSF_0884 [Yersinia pestis Pestoides F]
 gi|229681080|gb|EEO77175.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis Nepal516]
 gi|229688614|gb|EEO80683.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229694016|gb|EEO84065.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229702032|gb|EEO90053.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis Pestoides A]
 gi|262362162|gb|ACY58883.1| hypothetical protein YPD4_1976 [Yersinia pestis D106004]
 gi|262365495|gb|ACY62052.1| hypothetical protein YPD8_1367 [Yersinia pestis D182038]
 gi|270339160|gb|EFA49937.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294354177|gb|ADE64518.1| hypothetical protein YPZ3_1608 [Yersinia pestis Z176003]
          Length = 333

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 121/286 (42%), Gaps = 48/286 (16%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+I+  ++I  S+SG+++  ++   I+    G++ +  V +G  +  G  L+    I   
Sbjct: 60  WAIIGKLDIHASASGKVIVAEHSKIIQPAEPGVVTEINVRDGDTVDAGQVLIALNPIG-- 117

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES---REEQLLDFLGKYHSTCS 150
             ID     ++N+   +            +Y  LE A       +E L +F   Y+S  S
Sbjct: 118 --ID---AEVRNINQQL------------QYRQLEAARLVALLADEPLKNFKPPYNSPES 160

Query: 151 KVFNYG--ISSVYRSLKMKLTRMRS-IYLNRLDLE---NKSSLLRALLSSHQKDLTMMKN 204
            V      ++  Y  +  +L+R  S + +N+  L+     +S  +ALL +  + L   + 
Sbjct: 161 LVVASRALLTKEYAEVTAELSRQDSELAVNQAHLQAGIEHNSHQKALLKNIHRRLQASRT 220

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLE----------LRENIHEQKNMLRHINELYDEANLE 254
           L +  ++++ +L  QER    +T E          LR   H       H     D  N E
Sbjct: 221 LAKSKSIAEVELLVQEREWLTATAEANRLQSEQDILRAKAHSLAQTRMHYLAKIDRDNRE 280

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
             N   EI   L+Q Q         + +++K R+Q T+ +P+AG I
Sbjct: 281 RLNKTHEIIHQLQQEQ---------IKMMDKQRQQ-TLRAPVAGVI 316


>gi|254430762|ref|ZP_05044465.1| putative transporter component [Cyanobium sp. PCC 7001]
 gi|197625215|gb|EDY37774.1| putative transporter component [Cyanobium sp. PCC 7001]
          Length = 388

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 38/211 (18%)

Query: 179 LDLENKSSL-----LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           L L+N+++L     LR  + + ++ L++ K L  +  +S ND  QQ   V    L L + 
Sbjct: 107 LRLDNETTLDRRNSLRESIRAKEEQLSL-KRLELRRYLSLNDTEQQ---VLTRNLNLEKQ 162

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDL--------------EQN----QRTFAD 275
           I E+   L+ +  + +   L+  N ++E+  +L              EQ+    Q   +D
Sbjct: 163 ILERLASLQEVGAVPELQYLQQRNQVREVEGELQKVQVDRFRQKAILEQSVAELQSELSD 222

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY-AQQSQPLMKIVPHSKLTYIRAKV 334
             SKLT L+     + I SP+ G IV++   + + + AQ S+P+MKIVP S L    AKV
Sbjct: 223 LRSKLTELKVNIRYQDIRSPVDG-IVFDLKPTGTGFVAQGSEPVMKIVPFSAL---EAKV 278

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
              +I     G+   VR     DI    F A
Sbjct: 279 ---EIDSSDIGF---VRVGKPVDISIDSFPA 303


>gi|171058983|ref|YP_001791332.1| HlyD family type I secretion membrane fusion protein [Leptothrix
           cholodnii SP-6]
 gi|170776428|gb|ACB34567.1| type I secretion membrane fusion protein, HlyD family [Leptothrix
           cholodnii SP-6]
          Length = 468

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 70/348 (20%), Positives = 142/348 (40%), Gaps = 37/348 (10%)

Query: 22  LLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           LL+I  G + L  W+ +  I+    + G+++    V  ++S   GI+++  V+ G     
Sbjct: 59  LLTITAGFVALAGWASVAEIDTVAQALGKVIPSAKVQMVQSLEGGIVQEIHVKTG----- 113

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV--LEKAFESREEQL 138
                  + +E  DL+    VS+   +   D +      L ++  V  L+   + RE   
Sbjct: 114 -------QAVEAGDLL----VSLSQTQVDADFQSRQQQALTHQARVARLQAEADGREPMF 162

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM--RSIYLNRLDLENKSSLLRAL---LS 193
              L + H     V      S  ++ +    RM    +   R +L+   + ++     L 
Sbjct: 163 ATELQRQHPQNVAVEQAAFRS-RQAEQQAQARMLDAQVLQKRAELDESRNAMQTAQRSLQ 221

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST---LELRENIHEQKNMLRHINELYDE 250
           + + +  M++ L ++    + +L + +R + ++       +  I   +  +   +   D 
Sbjct: 222 TARDERVMVQKLVDQGLEPRIELVRLDRQIAEAEGRYAGAQVAIERTEQAILETSARRDS 281

Query: 251 ANLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF--S 307
              +F A    E++R L  + R+ A  M  L   E   E+  + +P+ G  V N+ F  S
Sbjct: 282 VQRQFRAQARDELNRALA-DLRSLAPAMPAL---EDRVERTALRAPVRG--VVNRVFVNS 335

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
                +   P++++VP      + AKV P+ I  V+ G  A V+   Y
Sbjct: 336 VGGVTRPGDPVVELVPVEDKLVVEAKVDPRDIGFVRVGQDARVKLTAY 383


>gi|72382586|ref|YP_291941.1| secretion protein HlyD [Prochlorococcus marinus str. NATL2A]
 gi|72002436|gb|AAZ58238.1| Secretion protein HlyD [Prochlorococcus marinus str. NATL2A]
          Length = 357

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 24/172 (13%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E++ N   QK   +    L++E  +    Y        E+ +  F    ++   LE    
Sbjct: 108 EIKANYETQKASFKRREMLFNEGAISAEEY--------EEYKNKFLKSKARFKQLEVEEN 159

Query: 289 QKTILSPIAGTIV---------YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           + +I +P  G I             + S+S+  +       IV  S+   I AKV    I
Sbjct: 160 EISIRAPFRGVITSRYAVPGAFVTPTTSASSSREGGATSSSIVKLSQGLEIVAKVPESDI 219

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             +K G  A++R   + D   K+FKA++ KI P  + ++NN+ +   +EV L
Sbjct: 220 GRIKTGQDASIRVDAFPD---KRFKAVVSKISP-SAIKNNNVTS---FEVTL 264


>gi|291286069|ref|YP_003502885.1| type I secretion membrane fusion protein, HlyD family
           [Denitrovibrio acetiphilus DSM 12809]
 gi|290883229|gb|ADD66929.1| type I secretion membrane fusion protein, HlyD family
           [Denitrovibrio acetiphilus DSM 12809]
          Length = 450

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 146/350 (41%), Gaps = 62/350 (17%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI- 90
           I W+ +  ++      G ++    +  I++   GII+K  V+ G  + +G  L+T +D  
Sbjct: 52  IIWANIAEVDEMTRGMGRVIPSRQIQIIQNLEGGIIEKINVQEGEHVKKGQVLVTIDDTG 111

Query: 91  ------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
                 E+    D  +  +  LR   +  K      N   DV  K F     +L+D   K
Sbjct: 112 FGSSYNESRSKEDELRAKLSRLRAESEGSK-----FNPDPDV-HKNF----PELIDEERK 161

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ---KDLTM 201
            + T  +  +  I+    +LK + TR R I     +L++  + L+ L +S +   +++ +
Sbjct: 162 LYKTNLERRDSEIA----TLKER-TRQREI-----ELQDARAKLKNLKASRELILREMRL 211

Query: 202 MKNLFEKNAVSQND---LNQQE-------RIVYKSTLELRENIHEQKNMLRHINELYDE- 250
            K +F++  VS+ +   L Q+E         + KS   ++  I E K+M   I+E Y + 
Sbjct: 212 TKPMFDRGLVSEVEYLQLQQKELENKTDIESLEKSLGSIQSQIIEAKSM---IDETYAKY 268

Query: 251 ---ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF- 306
              A  E    L E+ R +   Q    D +++            + SP+ GT+  NQ   
Sbjct: 269 KSVAQEELNETLAELKR-VSTTQVAMKDRVNR----------AQVRSPVDGTV--NQLLV 315

Query: 307 -SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +     +    +++IVP      + AK+ P  I  +  G  A V+   Y
Sbjct: 316 NTVGGVVKPGMDILEIVPDDDALLVEAKIKPSDIAFIYPGLRAVVKLTAY 365


>gi|82701493|ref|YP_411059.1| branched-chain alpha-keto acid dehydrogenase subunit E2
          [Nitrosospira multiformis ATCC 25196]
 gi|82409558|gb|ABB73667.1| Catalytic domain of components of various dehydrogenase complexes
          [Nitrosospira multiformis ATCC 25196]
          Length = 450

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 9/62 (14%)

Query: 40 IEISVSSSGEILNEDNVV---------EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
          IE+ V +   I  ED+++         E+ SPF+GII++  V+ G ++ +G+P+LT E  
Sbjct: 21 IEVLVKAGDSIKAEDSLIVLESDKATIEVPSPFAGIIRELSVKVGDKVSEGSPILTLEAS 80

Query: 91 ET 92
          E 
Sbjct: 81 EA 82


>gi|238789617|ref|ZP_04633401.1| HlyD family secretion protein [Yersinia frederiksenii ATCC 33641]
 gi|238722370|gb|EEQ14026.1| HlyD family secretion protein [Yersinia frederiksenii ATCC 33641]
          Length = 440

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 72/412 (17%), Positives = 156/412 (37%), Gaps = 31/412 (7%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W+ L P++  ++  G I+  +N   ++    G I++  +  G ++++G  L+T +D  
Sbjct: 40  LLWAGLAPLDKGIAVMGHIVVAENRKVVQPLQGGRIQQLHIVEGDEVIEGQLLITLDDTT 99

Query: 92  TT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESR----EEQLLDF 141
                D +  + +S       +  E+  L  +    ++L   E+    R    ++QL  F
Sbjct: 100 IRSHRDNLQQQYLSALAQESRLTAEQHDLPTIIFPPELLQYPEQPLAERNIVLQQQL--F 157

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKM-KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             +  +  S+V       V    ++  L  +R     + DL              Q+ L 
Sbjct: 158 QHRRQAQLSEVARLSAQMVRHESRLDGLQTIRGHNQRQFDL-------------FQRQLQ 204

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            ++ L +    SQ+ L   ER        + +N  E   + + I E+          +  
Sbjct: 205 GVQLLAKNGHASQSQLLDMERQSISLRANVEKNTSEILELHKQIGEIEQHILQRREQFKS 264

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E    L + Q T  +   +L + E       I +P++G+++     +        Q LM+
Sbjct: 265 ENREQLAKAQHTTQELKQRLGVAEYELTNTRIFAPVSGSVIALAQHTVGGIVSTGQTLME 324

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +VP+ +     A++    I  V  G    + F  +      + +  + ++     Q  + 
Sbjct: 325 LVPNGQPLLAEAQLPVSLIDKVTVGLPVDLNFSAFNQSNTPRLQGAVLRVGADRIQHPHT 384

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           L+   YY + + I +       + +R G   ++       +L   +  P+TD
Sbjct: 385 LEP--YYPLTVTIDN---PTTPLVIRPGMSVDIFIRTGERSLLNYLFKPLTD 431


>gi|312958412|ref|ZP_07772933.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
 gi|311287476|gb|EFQ66036.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
          Length = 457

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 65/348 (18%), Positives = 137/348 (39%), Gaps = 28/348 (8%)

Query: 19  RMTLLSIIGIIG----LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           R+  L+I G+IG    L+ W+    I+      G+ +    + +I++   GI+ +  V  
Sbjct: 41  RIVRLTIWGVIGFFVFLLLWAHFAIIDEVTKGDGKAIPSSRIQKIQNLEGGIVAQIYVHE 100

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G PL+  +D       ++ +     +   +  E+ + +  N   ++ E A ++ 
Sbjct: 101 GQIVEAGAPLVRLDDTRFAS--NVGETEADRVAMELRVERLSAEIENRPLNITEDARKAV 158

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             Q  +    Y S   ++ +  I  + + L  +    R     +    N  +LLR     
Sbjct: 159 PNQASNEESLYLSRRQQLADE-IGGLQQQLLQRQQESREFSSKQEQYRNSLNLLR----- 212

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQER-------IVYKSTLELRENIHEQKNMLRHINEL 247
             +++ M + L ++ A+S  ++ + +R       ++  +TL +         + R I+E 
Sbjct: 213 --QEIGMSEPLVKQGAISPVEVLRLKRSEVETRGMLDGTTLAIPRAQAAINEVQRKIDET 270

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +   E    L E   +L + Q T          LE    +  + SP+ G +      +
Sbjct: 271 RGKFRSEALAQLNEARTNLSKAQATSKG-------LEDRVSRTMVTSPVRGIVKQMLVNT 323

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
                Q    + ++VP      + AK+ P+ I  +  G  A ++F  Y
Sbjct: 324 VGGVIQPGSDMAEVVPLDDTLLVEAKIRPQDIAFLHPGQEAMIKFTAY 371


>gi|154505948|ref|ZP_02042686.1| hypothetical protein RUMGNA_03490 [Ruminococcus gnavus ATCC 29149]
 gi|153793966|gb|EDN76386.1| hypothetical protein RUMGNA_03490 [Ruminococcus gnavus ATCC 29149]
          Length = 697

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
           FLGK +    ++ + G++ VY+    KL R  +I + + D  +  + ++  LS  Q    
Sbjct: 7   FLGKRYEILDRIGSGGMADVYKGKDHKLNRYVAIKVLKSDFRSDETFIKKFLSEAQ---- 62

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
               L   N V+  D+  Q+R VY   +EL E I
Sbjct: 63  AAAGLMHPNVVNVYDVG-QDRGVYYMVMELVEGI 95


>gi|50843531|ref|YP_056758.1| dihydrolipoamide acetyltransferase component of pyruvate
          dehydrogenase complex [Propionibacterium acnes
          KPA171202]
 gi|50841133|gb|AAT83800.1| dihydrolipoamide acetyltransferase component of pyruvate
          dehydrogenase complex [Propionibacterium acnes
          KPA171202]
 gi|315107885|gb|EFT79861.1| 2-oxo acid dehydrogenase acyltransferase [Propionibacterium acnes
          HL030PA1]
          Length = 469

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 25/41 (60%)

Query: 49 EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
          E+    ++VE+ SPF+G + K   E G  +  GTPL+T +D
Sbjct: 37 EVETAKSIVELPSPFAGTVAKLCAEPGETVAVGTPLVTIDD 77


>gi|242279149|ref|YP_002991278.1| hypothetical protein Desal_1677 [Desulfovibrio salexigens DSM 2638]
 gi|242122043|gb|ACS79739.1| hypothetical protein Desal_1677 [Desulfovibrio salexigens DSM 2638]
          Length = 451

 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 6/104 (5%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S +R  + +++ +  L++W + L     V +  EI+ ED  + + +P SG++ +  VE+G
Sbjct: 178 SWRRFLVATVVLLAVLLSWRVPL----RVVAPCEIIPEDPFI-VTAPLSGVVSEVLVESG 232

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNL-RCHIDTEKSALD 118
            Q+  G+ L  ++       + + +  +K L R  ++TE  ALD
Sbjct: 233 DQVKAGSLLFDYDPRVVMQELKIAQQQVKTLQRTLMNTELKALD 276


>gi|17230167|ref|NP_486715.1| hypothetical protein all2675 [Nostoc sp. PCC 7120]
 gi|17131768|dbj|BAB74374.1| all2675 [Nostoc sp. PCC 7120]
          Length = 507

 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 7/83 (8%)

Query: 13  HPASLK------RMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           HP  LK      R  L +++ + I  + W+ +  IE +V + G++  +DNV E++ P  G
Sbjct: 36  HPLMLKQSSGWSRGILWTLMFVSIAAVAWASVSKIEQAVPAQGKLEPQDNVNEVQIPIEG 95

Query: 66  IIKKFQVENGSQILQGTPLLTFE 88
           ++K   V++G ++  G  L++ +
Sbjct: 96  VVKTIHVKDGHRVKAGDLLVSLD 118



 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/104 (23%), Positives = 56/104 (53%), Gaps = 6/104 (5%)

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           ++S+ +  N++  A+  S+L+   +  +   + SP+ G +   ++ +    A+ ++P++K
Sbjct: 327 QLSKAIVDNKKRIAELDSQLSQTNQALKYSVVRSPVDGVVFDLKAHAPGFVAKSTEPVLK 386

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH--YADIR 359
           IVP + L   +  +T + I  +++G    VR   FP+  + DI+
Sbjct: 387 IVPQTNLVA-KVSITNQDIGFIREGMRVDVRIDSFPYSEFGDIK 429


>gi|156348444|ref|XP_001621851.1| hypothetical protein NEMVEDRAFT_v1g221504 [Nematostella vectensis]
 gi|156208152|gb|EDO29751.1| predicted protein [Nematostella vectensis]
          Length = 1090

 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 77/389 (19%), Positives = 152/389 (39%), Gaps = 60/389 (15%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+ +    + +I++   GI+ +  V  G  +  G PLL  +D       ++ +     L 
Sbjct: 1   GKAIPSSRLQKIQNLEGGIVAELFVREGQIVDAGDPLLRLDDTRFAS--NVGETEADRLA 58

Query: 108 CHIDTEKSALDFLNNKYDVLEKA--------------FESREEQLLDFLGKYHSTCSKVF 153
             +  E+ + +  + +  V ++               F SR++QLLD             
Sbjct: 59  LLLRVERLSAEVQDRELVVADEVREKVPRQADNEIQLFNSRKQQLLDE------------ 106

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              ++ +   L  +   +R     +    N  SLLR       +++ M + L  + A+SQ
Sbjct: 107 ---VAGLEEQLIQRQQELREFASKQGQFRNSLSLLR-------QEVQMSEPLVAQGAISQ 156

Query: 214 NDLNQQERIVYKSTLELREN---IHEQKNMLRHINELYDEANLEF-ANYLKEISRDLEQN 269
            ++ + +R   ++  +L      I   ++ ++ +    DE    F +  L E++      
Sbjct: 157 VEVLRLKRAEVEARGQLEATTLAIPRAESAIKEVERKIDETRGRFRSEALTELN-----E 211

Query: 270 QRTFADEMSKLTILEKTREQKT----ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
            RT   E+SK+    K  E +     ++SP+ G +      +     Q    L++IVP  
Sbjct: 212 ART---ELSKIQSTGKALEDRVNRTLVISPVRGIVKQLLVTTIGGVIQPGSDLVEIVPLG 268

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQ 384
           +   + A++ P+ I  +  G  A V+F  Y        KA +E+I    ++  D N    
Sbjct: 269 ENLLVEARIRPQDIAFLHPGQEAMVKFTAYDYTIYGGLKAELEQIGADTVTDDDGN---- 324

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEV 413
            +Y + L+           E+ NG   EV
Sbjct: 325 SFYVIKLRTNKSHLGRAEFEV-NGRGGEV 352


>gi|257095764|ref|YP_003169405.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048288|gb|ACV37476.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 467

 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 108/255 (42%), Gaps = 30/255 (11%)

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH-INEL---YDEAN 252
           ++L++ K L    AVS+ +L + ER V +   E RE    Q   L+  INE     +E  
Sbjct: 227 RELSVTKPLIGSGAVSEVELLRLERDVSRFRGE-REMAAAQIGRLQSAINEANRKIEEVG 285

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKT------REQKTIL-SPIAGTIVYNQS 305
           L F N          ++ +   + M+KL  L +       +  +++L SP+ GT+     
Sbjct: 286 LAFRN----------ESGKELGETMAKLNSLAEGGVGLSDKVSRSVLRSPVKGTVKRLLV 335

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     Q  + +++IVP      + A+V P+ I  +  G  A V+F  Y          
Sbjct: 336 NTVGGVVQPGKDIVEIVPLEDNLLLEARVHPRDIAFLHPGQKAVVKFTAYDFAIYGGLDG 395

Query: 366 IIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            +E I  D ++  + N      +Y V ++ T+ +   NN+ +  G  AEV       ++ 
Sbjct: 396 KLEHIGADTVVDDKGNA-----FYIVRVR-TNQSTLGNNLPVIPGMVAEVDIVTGEKSVL 449

Query: 424 QEIIHPITDNWPKIF 438
             ++ P+     + F
Sbjct: 450 SYLLKPVLRAKARAF 464


>gi|53713922|ref|YP_099914.1| hypothetical protein BF2630 [Bacteroides fragilis YCH46]
 gi|60682129|ref|YP_212273.1| putative ABC transporter lipoprotein [Bacteroides fragilis NCTC
           9343]
 gi|253567085|ref|ZP_04844536.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|52216787|dbj|BAD49380.1| putative membrane protein [Bacteroides fragilis YCH46]
 gi|60493563|emb|CAH08351.1| putative ABC transport system, lipoprotein [Bacteroides fragilis
           NCTC 9343]
 gi|251944209|gb|EES84718.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301163600|emb|CBW23151.1| putative ABC transport system, lipoprotein [Bacteroides fragilis
           638R]
          Length = 298

 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/197 (19%), Positives = 84/197 (42%), Gaps = 28/197 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R D+  + +  R  +++ +++   ++NL +  A +Q  L+  E  +     +L
Sbjct: 83  MKSVESQRPDVNKQIAATRQQIATARREKRRVENLLKAGAANQKQLDDWEAQIALLERQL 142

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +   +N    + E      ++ A                  D+++K           
Sbjct: 143 TAQMSSLQNSTNSLTEQGSSVAIQVAQ---------------VEDQLAKC---------- 177

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            ++SPI+GT++   +  +   A   +PL K+    ++ Y+RA +T +Q+  VK G   TV
Sbjct: 178 HVVSPISGTVLAKYA-EAGELAAVGKPLFKVADIDQM-YLRAYITSEQLSQVKLGNRVTV 235

Query: 351 RFPHYADIREKKFKAII 367
            F  Y     K++  ++
Sbjct: 236 -FSDYGGDERKEYPGVV 251


>gi|118479614|ref|YP_896765.1| hypothetical protein BALH_4041 [Bacillus thuringiensis str. Al
           Hakam]
 gi|196044838|ref|ZP_03112072.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|118418839|gb|ABK87258.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|196024326|gb|EDX62999.1| conserved hypothetical protein [Bacillus cereus 03BB108]
          Length = 455

 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 10/119 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L++N P  +K    L +  II  + WS    I+IS   S  I +    + +K   SG I 
Sbjct: 18  LEKNPPKFIKLFIYLVLTIIISALIWSYFSKIDISAKGSATIQSSTATIAVKPKVSGEIN 77

Query: 69  KFQVENGSQILQGTPLLTFEDI----------ETTDLIDLKKVSIKNLRCHIDTEKSAL 117
             +++ G ++ +G PL+   +           E  D +D    S+K L+  ID  +S L
Sbjct: 78  DIKIKQGEKVRRGDPLIVINNKQLEQEKKHLEENRDKLDAGIKSLKILKDVIDKNQSKL 136


>gi|52841747|ref|YP_095546.1| HlyD family secretion protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|30577827|emb|CAD90958.1| LssD protein [Legionella pneumophila]
 gi|52628858|gb|AAU27599.1| HlyD family secretion protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 378

 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 35/263 (13%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           S+Y +R+   N+   L+  L   QK+L + + L +  +VS+ ++ + ER    S  E++ 
Sbjct: 135 SLYESRMRELNQ---LKKSLELAQKELDLTRPLLKGGSVSEVEVIRLER----SVSEIKG 187

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           NI + K+    +++L ++A  E    ++    D ++  RT                  T+
Sbjct: 188 NIEKFKS--EELDKL-NKARTELFALIEANKADKDRLTRT------------------TV 226

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ G +   ++ +     Q    L++IVP      I AK+ P  I  +  G  A V+ 
Sbjct: 227 RSPVYGIVKQIKTTTIGGVVQPGSDLLEIVPLDDTLLIEAKIRPSDIGFIHPGQKAMVKI 286

Query: 353 PHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRN 407
             Y        + ++E I  D II ++ +  + +E Y ++   TD   L      + +  
Sbjct: 287 TAYDFSIYGGLEGVVEHISADTIIDEKTD--KKEESYYIVKVRTDKNYLGTEKKPLPIIP 344

Query: 408 GFPAEVLFTAKNTTLAQEIIHPI 430
           G  A V       ++ Q ++ PI
Sbjct: 345 GMQATVDILTGQKSVLQYLLKPI 367


>gi|299068683|emb|CBJ39920.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum CMR15]
          Length = 447

 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 74/325 (22%), Positives = 134/325 (41%), Gaps = 47/325 (14%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WSIL  ++I V+++G+I+  +    I +     ++K  VE G QI++   +L   D   +
Sbjct: 76  WSILGKVDIIVNATGKIIPSERTKTIAAVEVATVRKLHVEEG-QIVKAGDVLIELDARAS 134

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE-QLLDFLGKYHSTCSKV 152
           D                 +E+     L N+     +A  SR   + LD  G  H      
Sbjct: 135 D-----------------SERD--KALGNEQLARLQAARSRALIEALDHGGTPHLPPLD- 174

Query: 153 FNYGISSV-YRSLKMKLT---RMRSIYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFE 207
              GI SV +   +  L    R  +  LNRLD E  + +    L +   +D     +L +
Sbjct: 175 ---GIPSVRWNESEQHLVDQWRDYTAKLNRLDGEIRRYAEALPLATQRARDYA---DLAK 228

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            + VSQ+   ++E+    +  +LRE   ++  +      +  ++  +    L E S D  
Sbjct: 229 DHDVSQHAYIEKEQARIDTEGQLREARDQKTALTAETRRVAQDSLTDAKKILGESSEDAR 288

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           +     A   S         EQ  +++P++GT+      +       +QPLM+IVP   +
Sbjct: 289 R-----ASVHS---------EQLKLVAPVSGTVQQLTVHTVGTAVPVAQPLMQIVPEQSV 334

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRF 352
             + A +  K +  V++G  A V+ 
Sbjct: 335 VEVEAFLENKDVGFVQEGQEAQVKI 359


>gi|108758003|ref|YP_628796.1| RND family efflux transporter MFP subunit [Myxococcus xanthus DK
           1622]
 gi|108461883|gb|ABF87068.1| efflux transporter, RND family, MFP subunit [Myxococcus xanthus DK
           1622]
          Length = 421

 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 24/178 (13%)

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           +EQ +   A+  S+  + ++   +  +++P AG +   Q+ S+ +  Q S PL  +V   
Sbjct: 159 VEQAKGQLAEARSRHALAQEQLNRARVVAPFAGVVSERQA-SAGDVVQPSAPLFTVV-DP 216

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           +   + A V   Q++ VK      V F H     ++ F+  +E+I+P++      ++   
Sbjct: 217 RTLRLEASVPAAQLEQVK--VDTPVEF-HVTGYGDRAFRGTVERINPVVDPATGQVR--- 270

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI-----TDNWPKIF 438
            Y        +A  + +++L  G  AE    +K T   Q +  PI     T   P + 
Sbjct: 271 IY--------VAIPNTDLQLLAGLFAEGRVASKGT---QAVAIPIDAIDDTGTEPAVL 317


>gi|168489411|ref|ZP_02713610.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|183572030|gb|EDT92558.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
          Length = 449

 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 2/178 (1%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           K+M R  N    +A   +A  + E+      N ++  +  + L +     +  +IL+P  
Sbjct: 252 KDMNRTYNNPTSQAYNIYAQLISELGTARSNNNKSITELEANLGVATGQDKAHSILAPNE 311

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+ Y          QQ Q + ++    K  Y+ A V    I  V KG  A V       
Sbjct: 312 GTLHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKADVAITGVNS 371

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEV 413
            +    K  + +ID     Q+        Y+V++++  L        + L+   P EV
Sbjct: 372 QKYGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVVLQKDMPVEV 429


>gi|124026293|ref|YP_001015409.1| membrane fusion protein [Prochlorococcus marinus str. NATL1A]
 gi|123961361|gb|ABM76144.1| possible membrane fusion protein [Prochlorococcus marinus str.
           NATL1A]
          Length = 357

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 24/172 (13%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E++ N   QK   +    L++E  +    Y        E+ +  F    ++   +E    
Sbjct: 108 EIKANYETQKASFKRREMLFNEGAISAEEY--------EEYKNRFLKSKARFKQIEVEEN 159

Query: 289 QKTILSPIAGTIV---------YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           + +I +P  G I             + S+S+  +       IV  S+   I AKV    I
Sbjct: 160 ETSIRAPFRGVITSRYAVPGAFVTPTTSASSSREGGATSSSIVKLSQGLEIVAKVPESDI 219

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             +K G  A++R   + D   K+FKA++ KI P  + ++NN+ +   +EV L
Sbjct: 220 GRIKTGQEASIRVDAFPD---KRFKAVVSKISP-SAIKNNNVTS---FEVTL 264


>gi|146340351|ref|YP_001205399.1| putative secretion HlyD family protein RTX secretion protein D
           [Bradyrhizobium sp. ORS278]
 gi|146193157|emb|CAL77169.1| putative Secretion HlyD family protein, putative Gram-negative
           bacterial RTX secretion protein D [Bradyrhizobium sp.
           ORS278]
          Length = 449

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 5/183 (2%)

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           Y  E+ + L+  +   +D   K+ I E    +  I +   G ++  +  +     +    
Sbjct: 267 YQTEVGQQLDATRAKLSDLREKIVIAEDVLRRVDIYAERDGIVMNMKVHTIGEVVKPGDT 326

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L +IVP  +   + A V+P+ I+ V  G  A VRF +++    +   AI  K+  + +  
Sbjct: 327 LAEIVPVGEGVDVMAHVSPRDIESVAIGQKAEVRFANFS---SRTTPAIFGKVASVSADA 383

Query: 378 -DNNLQTQEYYEVILKITDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             +    Q YY+  + I          E +  G  A+V+ +    T+ + ++ P+ +   
Sbjct: 384 VSDEASKQSYYKARVVIDYSTIPPEIAEKILPGMQADVIISTGERTVLEYLVGPLLNTLA 443

Query: 436 KIF 438
           K F
Sbjct: 444 KTF 446


>gi|104782924|ref|YP_609422.1| type I secretion membrane fusion protein, HlyD [Pseudomonas
           entomophila L48]
 gi|95111911|emb|CAK16635.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           entomophila L48]
          Length = 451

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 16/175 (9%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN---IHEQKNMLRHIN 245
           R+ L   Q++L M   L  K A+S  ++ + ++   ++  +L      I   +  +  I 
Sbjct: 200 RSALGLLQQELDMSSPLVGKGAISPVEILRLKQRTVEARGQLNATSLAIPRAEAAVAEIR 259

Query: 246 ELYDEANLEF-ANYLKEISRDLEQNQRTFADEMSKLTI----LEKTREQKTILSPIAGTI 300
               EA+  F ++  KE++     ++RT   E+SK+T     ++    + T++SP+ G +
Sbjct: 260 SKIQEADAGFRSDAAKELN-----DKRT---ELSKITATSIAIDDRVNRTTVVSPVRGIV 311

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
              +  +     Q    L++IVP      I AKV P+ +  +  G TA V+F  Y
Sbjct: 312 KLLKVNTIGGVVQPGSDLVEIVPIEDNLLIEAKVRPQDVAFLHPGQTAMVKFSAY 366


>gi|330808166|ref|YP_004352628.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327376274|gb|AEA67624.1| Putative type I secretion membrane fusion protein, HlyD family
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 454

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 85/184 (46%), Gaps = 16/184 (8%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           +  +K     + L+  Q+++ M   L    AVS  ++ + +R    S +E+R +++    
Sbjct: 194 EFRSKQGQFSSALALLQEEMNMSAPLVRTGAVSPVEILRLKR----SAVEIRGSLNATTL 249

Query: 240 ML----RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI----LEKTREQKT 291
            +      INE+  + +     +  E ++DL + +RT   E+SK+T     ++    + T
Sbjct: 250 AIPRAESAINEIKSKIDESEQTFRSEAAKDLNE-KRT---ELSKITASSIAIDDRVTRTT 305

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           ++SP+ G I   +  +     Q    +++IVP      I AKV P+ +  +  G  A V+
Sbjct: 306 VVSPVHGVIKQLKVNTIGGVVQPGNDMVEIVPLEDNLLIEAKVRPQDVAFLHPGQKAMVK 365

Query: 352 FPHY 355
           F  Y
Sbjct: 366 FSAY 369


>gi|196039249|ref|ZP_03106555.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|196029876|gb|EDX68477.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
          Length = 455

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 10/119 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L++N P  +K    L +  II  + WS    I+IS   S  I +    + +K   SG I 
Sbjct: 18  LEKNPPKFIKLFIYLVLTIIISALIWSYFSKIDISAKGSATIQSSTATIAVKPKVSGEIN 77

Query: 69  KFQVENGSQILQGTPLLTFEDI----------ETTDLIDLKKVSIKNLRCHIDTEKSAL 117
             +++ G ++ +G PL+   +           E  D +D    S+K L+  ID  +S L
Sbjct: 78  DIKIKQGEKVRRGDPLIGINNKQLEQEKKHLEENRDKLDAGIKSLKILKDVIDKNQSKL 136


>gi|256818970|ref|YP_003140249.1| hypothetical protein Coch_0123 [Capnocytophaga ochracea DSM 7271]
 gi|256580553|gb|ACU91688.1| conserved hypothetical protein [Capnocytophaga ochracea DSM 7271]
          Length = 310

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 25/211 (11%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTR-MRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
           +G+ + T  K+    + +   SLK K       + L R  LE    + RA L+  +++LT
Sbjct: 60  VGQINVTLLKIQKEQVEATIASLKEKTQNPADQVALIRSQLE----VQRAQLAQQERELT 115

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             +NL    A +Q  L+    ++     +LR+ I   +N L+         N +  N L 
Sbjct: 116 RTQNLVRGGAATQKQLDDLSALID----QLRKQIAVTENQLKV---SLTNINTQNRNVLS 168

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           +    L++N +   ++++          Q  I++PIAGT++ N +          +PL K
Sbjct: 169 Q-EAPLQKNAQAVQEQIN----------QGEIINPIAGTVLVNYALKGE-MQTFGKPLYK 216

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I     LT ++A +T  Q+  +K G   TVR
Sbjct: 217 IANTDVLT-LKAYITGDQLSQIKLGQQVTVR 246


>gi|253990552|ref|YP_003041908.1| RTX toxin ABC transporter protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638877|emb|CAR67492.1| RTX toxin ABC transporter protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782002|emb|CAQ85166.1| RTX toxin ABC transporter protein [Photorhabdus asymbiotica]
          Length = 451

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 86/368 (23%), Positives = 158/368 (42%), Gaps = 50/368 (13%)

Query: 9   LKRNHPASLKRMT--LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           L +  P+   R T  +LS+  II L+ W+ L  +++  +++G ++       I++     
Sbjct: 29  LSQRPPSPFARYTAIMLSVSIIIALL-WAYLGKLDVQATATGRLIVSGRSQIIQAYEQSR 87

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+NG ++++  PLLT + +      D+ K+  K +      EK     L  K + 
Sbjct: 88  VTAIHVQNGQRVIKDDPLLTLDTLGVNQ--DIAKL-FKQIEYQTH-EKIRYQALTEKQEP 143

Query: 127 LEKAF-----ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            E+        S++ Q+++     +S   + +  GI+++   + + L   ++    + D+
Sbjct: 144 AEQGLFQTLPASQQAQVVE----NYSREKREYEAGITNLKAEMNVNLASQQA---RKSDI 196

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            N  + LR  +S     L   + L EK  +S+ +  +QE    K  LE    I +Q + L
Sbjct: 197 -NALTKLRQNISQR---LKARQTLSEKQVISKVEYLEQE----KEFLETERLIAQQNSEL 248

Query: 242 RHINELYDEANL-EFANYLKEISRDLEQNQRTFADEMS----KLTILE------KTREQK 290
             +   Y   NL E  N LK       Q +R + D+      +L + E      + REQ 
Sbjct: 249 HVLQSQY--INLEERLNGLK------AQKEREWFDKRKQSEVQLVVSEQDLSKAQAREQL 300

Query: 291 TIL-SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            I+ SP+ GT+      +     Q +Q LM IVP   +     ++  K    V  G   T
Sbjct: 301 EIIRSPVTGTVQQLSVHTLGAVLQPAQNLMVIVPDDNVQLAEVQILNKDAGFVHPGQQVT 360

Query: 350 VR---FPH 354
           V+   FP+
Sbjct: 361 VKVDAFPY 368


>gi|148994314|ref|ZP_01823578.1| hypothetical protein CGSSp9BS68_07267 [Streptococcus pneumoniae
           SP9-BS68]
 gi|147927344|gb|EDK78376.1| hypothetical protein CGSSp9BS68_07267 [Streptococcus pneumoniae
           SP9-BS68]
 gi|332075786|gb|EGI86253.1| hypothetical protein SPAR50_0121 [Streptococcus pneumoniae GA17570]
          Length = 450

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 2/178 (1%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           K+M R  N    +A   +A  + E+      N ++  +  + L +     +  +IL+P  
Sbjct: 252 KDMNRTYNNPTSQAYNIYAQLISELGTARSNNNKSITELEANLGVATGQDKAHSILAPNE 311

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+ Y          QQ Q + ++    K  Y+ A V    I  V KG  A V       
Sbjct: 312 GTLHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKADVAITGVNS 371

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEV 413
            +    K  + +ID     Q+        Y+V++++  L        + L+   P EV
Sbjct: 372 QKYGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVVLQKDMPVEV 429


>gi|302038533|ref|YP_003798855.1| putative multidrug resistance protein A [Candidatus Nitrospira
           defluvii]
 gi|300606597|emb|CBK42930.1| putative Multidrug resistance protein A (modular protein)
           [Candidatus Nitrospira defluvii]
          Length = 515

 Score = 41.6 bits (96), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 22/209 (10%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L  ++ R+ S+++NR  L  K    RA L   + D+   +      A+S+  L      +
Sbjct: 123 LGEEVRRIASLFINRKQLAEKLRSRRARLELAEHDMDRYQRAAPSGAISKQILQNTADKI 182

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                E+RE   E  ++         +A +     +   + DL ++Q   A        L
Sbjct: 183 ASLDAEVRETQAELDSL---------DAQIGGTTVMAHPAVDLAKHQLIEAH-------L 226

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E  R+Q  I +PI+G +   ++    +  Q    LM IVP   L ++ A +   ++QHV+
Sbjct: 227 EYARQQ--IRAPISGYVAKRKA-QVGDRVQPGALLMTIVPLDHL-WVEANLRETELQHVR 282

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDP 372
            G  A V    Y    ++ F   +E + P
Sbjct: 283 PGQPALVNVSLYGS--KQTFHGTVEGLVP 309


>gi|238920045|ref|YP_002933560.1| type I secretion membrane fusion protein, HlyD family [Edwardsiella
           ictaluri 93-146]
 gi|238869613|gb|ACR69324.1| type I secretion membrane fusion protein, HlyD family [Edwardsiella
           ictaluri 93-146]
          Length = 445

 Score = 41.6 bits (96), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 74/373 (19%), Positives = 140/373 (37%), Gaps = 43/373 (11%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M  L I  ++    WS    I+I  ++ G++  +  V  I+S  +G + +  ++NG ++ 
Sbjct: 1   MYTLCIFTVLAF-AWSFFGRIDIIATAPGKVQPQGYVKVIESEVTGKVSRILLKNGDRVS 59

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIK-------------NLRCHIDTEKSALDFLNNKYDV 126
           +G         ET  L+D      K              L      ++ A D       +
Sbjct: 60  EG---------ETVALLDAADSQAKYNDALYNFSSFYAELWRRKTQDRLARDLSVEDRAI 110

Query: 127 LEKAFESREEQLLDFLGKYHSTCS-----KVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            + A E   + LL    K+  T +        N  + ++   L    TR + +   +  +
Sbjct: 111 TDFAVEWPAQPLLPEEIKHRETSAMHGELTQLNTDLQNIRAQLAQNTTREQGM---KATI 167

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            ++ SL+  L     + L + + L EK  VS++D  Q    +     E +  +      L
Sbjct: 168 ASQKSLIETL----NERLQIRRTLVEKQVVSKDDWLQ----IMTDVKEAKSTLQSTLAQL 219

Query: 242 RHINELYDEANLEFA----NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           R I    D   +       +++ E  +++ Q +R       ++   E      T  SPI 
Sbjct: 220 RDIQAARDILQIALLKTRHDFISENLKNIGQVERQSNSLREQVNQREAQLALMTFKSPIN 279

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GTIV +   S        + LM++VP +    I A V  + I  ++ G    V+   +  
Sbjct: 280 GTIVASSLVSQGQVVTPGEELMRVVPDNSRLEIIAYVPNQDIGFIRPGQPVDVKINAFPY 339

Query: 358 IREKKFKAIIEKI 370
            R      +++ I
Sbjct: 340 TRYGTLNGVVQHI 352


>gi|56551151|ref|YP_161990.1| HlyD family type I secretion membrane fusion protein [Zymomonas
           mobilis subsp. mobilis ZM4]
 gi|56542725|gb|AAV88879.1| type I secretion membrane fusion protein, HlyD family [Zymomonas
           mobilis subsp. mobilis ZM4]
          Length = 393

 Score = 41.6 bits (96), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 191 LLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           L  S +  L M + +L ++ A+ +N+L   E +V +      E +     + R ++E+  
Sbjct: 145 LYRSRRNSLAMGLSDLHQQLALIKNELTMTEPLVARGAASDVEVLR----LKRQVSEIDT 200

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A+     Y+ +   DLE+ +     + S         ++ T  SP+ G +   +  +  
Sbjct: 201 RADDMQNQYMVKAREDLEKAEAEAKAQQSVTKGRSDMLDRLTFTSPVRGIVKDIEVTTKG 260

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                +  LM IVP  +   + A+++P+ I  +  G  ATV+   Y         A +  
Sbjct: 261 GVIPPNGRLMTIVPLDEQLLVEARISPRDIAFIHPGQRATVKLTAYDYAIYGGLPAKVTV 320

Query: 370 IDPIISQQDNNLQTQEYYEVILK 392
           I P  + QD+  +   YY V ++
Sbjct: 321 ISP-DTVQDDVRKDSYYYRVWVR 342


>gi|163748692|ref|ZP_02155945.1| HlyD family secretion protein [Shewanella benthica KT99]
 gi|161331802|gb|EDQ02606.1| HlyD family secretion protein [Shewanella benthica KT99]
          Length = 460

 Score = 41.6 bits (96), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 73/379 (19%), Positives = 158/379 (41%), Gaps = 19/379 (5%)

Query: 16  SLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           ++ R+ + S+   I+  + W+    ++   +  G+++    +  I+S   GI+++  V+ 
Sbjct: 26  TIHRLIIWSLAAMIVCFLVWAYFSELDQVTTGMGKVIPSSQIQMIQSLDGGIMQEMYVKE 85

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKA- 130
           G  + +G  L+  +D       D +   + +L+ ++    +E +++   +   D  E+  
Sbjct: 86  GMMVTKGQALMRIDDTRFRSDYDQQAQEVYSLQANVVRLSSELASITITSMSVDWREQVK 145

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLR 189
              R  Q    L +      +  +   S    SL  +L  + R I   + + +  +S + 
Sbjct: 146 ITPRPLQFPGELIQQEPALVQRQSNEYSGRLDSLINQLEILARQIQQKQQESKELASKID 205

Query: 190 ALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L  S+Q   ++L + K L +K  V + +L + ER+V     ++R  +   + +   +  
Sbjct: 206 TLSRSYQLVSRELELTKPLADKGIVPEIELIKVERVVN----DIRGELASLRLLRPKLKA 261

Query: 247 LYDEANLE----FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIV 301
             DEA L+      N+  +    L + Q   +  M++  +  + +  K ++ SP+ GTI 
Sbjct: 262 SQDEAILKRREAVLNFAVDARTQLNELQTKLS-RMNEAQVGARDKVNKAVIKSPVNGTIK 320

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +     Q    +++IVP      I  K+ PK I  +  G  A V+   Y   R  
Sbjct: 321 TIHINTLGGVVQPGIDIIEIVPSDDQLLIETKILPKDIAFLHPGLPAIVKVTAYDFTRYG 380

Query: 362 KFKAIIEKIDPIISQQDNN 380
               ++E I    +Q +  
Sbjct: 381 GLNGVVEHISADTTQDEEG 399


>gi|148241586|ref|YP_001226743.1| hypothetical protein SynRCC307_0487 [Synechococcus sp. RCC307]
 gi|147849896|emb|CAK27390.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
          Length = 386

 Score = 41.6 bits (96), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 79/347 (22%), Positives = 133/347 (38%), Gaps = 94/347 (27%)

Query: 24  SIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +I+G IG    ++++  I+  V + GE+        IK+P SG++    V  G  +  G 
Sbjct: 39  AIVGCIGFGFLYAVVARIDEVVIARGELKGMGAERPIKAPVSGVVSGIPVTEGELVTPGQ 98

Query: 83  PLLTFE-DIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            L+ F+ ++ T  L  L   K++  + L+  I                  +AFE+RE+ L
Sbjct: 99  VLIQFDPEVNTERLRSLGRQKELESRRLKEEI------------------QAFEAREDSL 140

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              L                    SL+M L    SI                        
Sbjct: 141 QAKL-------------------NSLQMTLKVEASI------------------------ 157

Query: 199 LTMMKNLFEKNAVSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +  M  L  + A+++   L Q+ R+      EL+  I + +  LR +             
Sbjct: 158 VDRMAGLVSQGAIAEVQYLQQKNRL-----QELQSEIAQTEATLREVQ------------ 200

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS-Q 316
              E  +  +Q QR  AD   +L    K++E +++ +P+ G  V++   +S  YA  S +
Sbjct: 201 --AESIKSKQQIQRELADLERQLVETNKSQEYESLRAPVKG-YVFDLIVASPGYAASSGE 257

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR-----FPHYADI 358
            L+KIVP   L      VT   +  ++    A VR     F  Y DI
Sbjct: 258 TLLKIVPEGMLE-ASVFVTNADVGFLRPKMPAQVRVDAYPFTQYGDI 303


>gi|254472468|ref|ZP_05085868.1| HlyD family secretion protein [Pseudovibrio sp. JE062]
 gi|211958751|gb|EEA93951.1| HlyD family secretion protein [Pseudovibrio sp. JE062]
          Length = 437

 Score = 41.6 bits (96), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 15/149 (10%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP +GT+      +        + +M+IVP   +  I A+V P  +  +     ATVR
Sbjct: 290 IKSPQSGTVHDLTIHTIGGVIAPGEVVMQIVPREDVLVIEAQVQPIDVDQLTPNQEATVR 349

Query: 352 FPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITDLAFSDNNIE------ 404
            P +      +  A ++ I P ++      L    +Y     + +L  S++ ++      
Sbjct: 350 LPSFDQRTTPELTAAVKTISPDLLEDPKTGL---SFY-----MAELTISEDEMDKLGGKN 401

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           L  G P E     +N T+   I+ P+ D 
Sbjct: 402 LVPGMPVEAFIQTENRTVISYIMKPMVDQ 430


>gi|260753200|ref|YP_003226093.1| type I secretion membrane fusion protein, HlyD family [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
 gi|258552563|gb|ACV75509.1| type I secretion membrane fusion protein, HlyD family [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
          Length = 393

 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 191 LLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           L  S +  L M + +L ++ A+ +N+L   E +V +      E +     + R ++E+  
Sbjct: 145 LYRSRRNSLAMGLSDLHQQLALIKNELTMTEPLVARGAASDVEVLR----LKRQVSEIDT 200

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A+     Y+ +   DLE+ +     + S         ++ T  SP+ G +   +  +  
Sbjct: 201 RADDMQNQYMVKAREDLEKAEAEAKAQQSVTKGRSDMLDRLTFTSPVRGIVKDIEVTTKG 260

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                +  LM IVP  +   + A+++P+ I  +  G  ATV+   Y         A +  
Sbjct: 261 GVIPPNGRLMTIVPLDEQLLVEARISPRDIAFIHPGQRATVKLTAYDYAIYGGLPAKVTV 320

Query: 370 IDPIISQQDNNLQTQEYYEVILK 392
           I P  + QD+  +   YY V ++
Sbjct: 321 ISP-DTVQDDVRKDSYYYRVWVR 342


>gi|227328573|ref|ZP_03832597.1| HlyD family secretion protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 453

 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 91/449 (20%), Positives = 180/449 (40%), Gaps = 61/449 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  + P S+ R TL +I    +  I W+ L  I+      G+ +    + +I++   G
Sbjct: 30  RAMAEDSPRSI-RFTLWAIGAFFLFFILWAGLANIDEVTRGDGKAIPSSRLQKIQNLEGG 88

Query: 66  IIKKFQVENGSQILQGTPLLTFED------IETTDLIDLKKVS-IKNLRCHIDTEKSALD 118
           II +  +  G  +  G PLL  +D      +  T+   L  +S I+ L   I+ ++    
Sbjct: 89  IITEVFIREGQVVNAGDPLLRLDDTRFASNVGETEADRLALLSRIERLNAEINGQEL--- 145

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L+ +         + E++L      Y+S   ++ N  IS +   L  +   +R      
Sbjct: 146 VLSEEITTQAPKIAAGEKEL------YNSRRQQLHNE-ISGLEEQLIQRQQELRDFSAKE 198

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL-------- 230
           +   N   LL       Q+++ M + L  + A+S+ ++ +  R   ++  +L        
Sbjct: 199 IQFRNSLGLL-------QQEIKMSEPLIAEGAISKVEVLRLRRAEVETRGQLDSIKLSIP 251

Query: 231 --RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                I E +N +      Y    L   +  +     +E   +   D +++  ++   R 
Sbjct: 252 RAESAIKESENKIEETRSRYKSEALSQLSEAQTSLNKIEATGKALEDRVNRTLVVSPVRG 311

Query: 289 --QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             Q+ +++ I G I            Q    L++IVP      + AK+ P+ I  +  G 
Sbjct: 312 IVQQVLVNTIGGVI------------QPGSDLVEIVPLDDKLLVEAKIRPQDIAFLHPGQ 359

Query: 347 TATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITD---LAFSDNN 402
            A ++   Y        K  +E+I P  ++ ++ N     +Y + L+ TD   L  +D  
Sbjct: 360 DAIIKLTAYDYTIYGGLKGQLEQISPDTVTDKEGN----SFYIIRLR-TDKNYLGSADKP 414

Query: 403 IELRNGFPAEV-LFTAKNTTLAQEIIHPI 430
           + +  G  A V + T K T L+  ++ PI
Sbjct: 415 LLIIPGMVASVDIITGKKTILSY-LLKPI 442


>gi|212633884|ref|YP_002310408.1| type I secretion membrane fusion protein, HlyD [Shewanella
           piezotolerans WP3]
 gi|212555368|gb|ACJ27822.1| Type I secretion membrane fusion protein, HlyD [Shewanella
           piezotolerans WP3]
          Length = 469

 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 143/339 (42%), Gaps = 30/339 (8%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           I W+ L  + I  S+ G+I+    V +I+     ++K   V  G  + QG PL+  +   
Sbjct: 60  IVWACLGEVNIVASAEGKIIPSSKVKQIQPLEKAVVKNILVREGQYVHQGEPLIELDSTL 119

Query: 92  TTDLIDLKKVS--IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST- 148
           TT   D K++S  + + R  +   ++ L  L    +    A  S     LDF    ++T 
Sbjct: 120 TT--ADEKRLSGELHSARLSLAGSQALLVMLAQDVNDTNIALVS-----LDFPHVPNATQ 172

Query: 149 ----CSKVFNYGISSVYRS-LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                 K   +     YR+  +M  + +      +   +     L  +L    K  + MK
Sbjct: 173 VELALHKRLLWQQWLQYRAQWQMLQSNLLQTQAEQAASDEVIGKLEQILPIITKRTSTMK 232

Query: 204 NLFEKNAVSQND--LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-LEFANYLK 260
            L ++N  S+ND    +QERI Y  T +L       K +    +E+  + N L+    + 
Sbjct: 233 GLHKQNYASENDYLALEQERIQY--THDLAAEHQRLKQLQASESEVRQQFNTLKAQTSVT 290

Query: 261 EISR--DLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVYNQSFSSSNYAQQSQP 317
           E+++   ++Q   +  +E++K       R +K +L +P++G +      +      ++Q 
Sbjct: 291 ELTKIPQIQQQIASLQEELAKAV----DRNKKQVLYAPVSGQVQELSIGTVGGVVTEAQQ 346

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FP 353
           LM IVP   L  +   +  K I  V++   A ++   FP
Sbjct: 347 LMLIVPDEVLLDVEVFLDNKDIGFVREKMLAEIKIHTFP 385


>gi|296273031|ref|YP_003655662.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
 gi|296097205|gb|ADG93155.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
          Length = 440

 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 188/445 (42%), Gaps = 61/445 (13%)

Query: 13  HPASLKRM--TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
            PA +  M  T + I+ ++ +I W  +  I++   + G+ +    +V I+     II K 
Sbjct: 19  RPAKMLWMIPTFIGIL-VVMIILWLTISQIDVIAPAQGKTIPNSRMVLIQPKDISIIDKI 77

Query: 71  QVENGSQILQGTPLLTFED-IET----------TDLIDLKKVSIKNLRCHIDTEKSALDF 119
            V+NG  + +G  L+ F+D IE            +LI  +K+ + N   +I T+K +   
Sbjct: 78  YVKNGQSVKKGDLLVDFKDKIENFENNSVNAKYKNLI-AEKLFLDNYISYIKTKKIS--- 133

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR----SLKMKLTRMRSIY 175
                        S ++  L  L   +S  S        S Y     S +MK+ +   I 
Sbjct: 134 ----------KISSNKDLPLGILAMVNSKLSTNI-----SAYENDTLSFQMKIQK---ID 175

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
             +  +E++ S  + LL   + +L  +K L  K   S+  L   E+   K   +++  I 
Sbjct: 176 FEKKMVESELSKQQKLLPYTKHNLEQLKELVLKGYESEMSLQDMEKEYIKEDEDIKIKIA 235

Query: 236 EQKNMLRHIN----ELYDEANLEFANYLK---EISRDLEQNQRTFADEMSKLTILEKTRE 288
           E+  +   +N    EL    N    + LK   E+S +L     T   E+ K   +  T  
Sbjct: 236 EKNKLQAQLNISKKELEQFKNNTLKDLLKRENEVSNEL----TTLEPEVDKSNYILGT-- 289

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQS-QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            K+I + + GTI YN + S+ +   QS + +MK++P++    + AKV  K I  +  G  
Sbjct: 290 -KSIKATVDGTI-YNLTNSNKDKVVQSGEVIMKLIPNNTPLEVEAKVLNKDIGFISIGQK 347

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI-TDLAFSDNN-IEL 405
             V+   +   +  K+  I  ++  I      + +  E Y VI+++ TD+   DN  I+L
Sbjct: 348 VKVKLDSF---KFTKYGYIEGEVINIEKASILDEKLGEIYPVIIRLSTDIMKVDNKFIKL 404

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPI 430
             G    V        L   II P+
Sbjct: 405 IPGMTCSVDIKIGKRRLIDYIISPM 429


>gi|325982222|ref|YP_004294624.1| dihydrolipoyllysine-residue acetyltransferase [Nitrosomonas sp.
          AL212]
 gi|325531741|gb|ADZ26462.1| Dihydrolipoyllysine-residue acetyltransferase [Nitrosomonas sp.
          AL212]
          Length = 436

 Score = 41.2 bits (95), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 9/59 (15%)

Query: 40 IEISVSSSGEILNEDNVV---------EIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
          IEI + +   +  ED+++         EI SPFSG+I++  V++G ++ +GT +LT ED
Sbjct: 21 IEILIKAGDAVKTEDSLITLESDKATIEIPSPFSGLIREIFVKSGDKVSEGTAILTIED 79


>gi|262278515|ref|ZP_06056300.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter calcoaceticus RUH2202]
 gi|262258866|gb|EEY77599.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter calcoaceticus RUH2202]
          Length = 304

 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 72/354 (20%), Positives = 134/354 (37%), Gaps = 77/354 (21%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLIT---WSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           N+  + P  L R +L+  I  IGL+    W+ +  +E   + +G+++       I+S   
Sbjct: 15  NVSYSEP-PLPRASLVIWIVGIGLVIFFIWAWVFKLEEVSTGTGKVVPSSKEQVIQSLEG 73

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           GI+ K  V+ G  + +G  L   +         E+  L+   + +   LR  ++    A 
Sbjct: 74  GILTKLNVQEGDIVQKGEILAQLDPTRFASNVGESRSLLISAQATSARLRAEVNGTPLAF 133

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +     VL++     EE                     +++YRS              
Sbjct: 134 PEI-----VLKEPKLVHEE---------------------TALYRS-------------R 154

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R DLE   + L+  L   Q++L M + L  K A S+ ++           L LR   ++ 
Sbjct: 155 RADLEQTIAGLKQALQLVQQELAMTEPLVAKGAASEVEV-----------LRLRREANDL 203

Query: 238 KNMLRHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILS 294
           +N +  +   Y      F    +E+S+   D+E  Q+        L       ++    +
Sbjct: 204 RNKMNDVQNQY------FVKAREELSKANTDIETQQQVVLGRTDSL-------DRAIFKA 250

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           P+ G +      +      Q+  LM IVP  +   I A++ P+ I  ++ G  A
Sbjct: 251 PVRGVVKEIAVTTHGGVIPQNGKLMTIVPIDEQLLIEARILPRDIAFIRPGQEA 304


>gi|23009677|ref|ZP_00050637.1| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 344

 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 5/180 (2%)

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E++++L + Q   A+ + K    E   ++  I +P  G +      +        + +M 
Sbjct: 165 EVAKELSEVQAKIAELVEKRVAAEDQLKRIDIRAPQDGMVHQLAVHTIGGVVSPGESIML 224

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           IVP S    I AKV PK I  V+ G  A +R   +    ++    I   +  + + Q  +
Sbjct: 225 IVPRSDTLVIEAKVAPKDIDQVRLGQHAVLRLTAF---NQRTTPEIEGTVSLVAADQITD 281

Query: 381 LQTQ-EYYEVILKI-TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            +T   +++V ++   D       I+L  G PAEV       T+   +  P+ D   + F
Sbjct: 282 EKTGTSFFKVHVRPDADQVARLKGIKLVPGMPAEVFIRTGERTVLSYLTKPLNDQVRRAF 341


>gi|320014916|gb|ADV98487.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 333

 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 121/286 (42%), Gaps = 48/286 (16%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+I+  ++I  S+SG+++  ++   I+    G++ +  V +G  +  G  L+    I   
Sbjct: 60  WAIIGKLDIHASASGKVIVAEHSKIIQPAEPGVVTEINVRDGDTVDAGQVLIALNPIG-- 117

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES---REEQLLDFLGKYHSTCS 150
             ID     ++N+   +            +Y  LE A       +E L +F   Y+S  S
Sbjct: 118 --ID---AEVRNINQQL------------QYRQLEAARLVALLADEPLKNFKPPYNSPES 160

Query: 151 KVFNYG--ISSVYRSLKMKLTRMRS-IYLNRLDLE---NKSSLLRALLSSHQKDLTMMKN 204
            V      ++  Y  +  +L+R  S + +N+  L+     +S  +ALL +  + L   + 
Sbjct: 161 LVVASRALLTKEYAEVTAELSRQDSELAVNQAHLQAGIEHNSHQKALLKNIHRRLQASRT 220

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLE----------LRENIHEQKNMLRHINELYDEANLE 254
           L +  ++++ +L  QER    +T E          LR   H       H     D  N E
Sbjct: 221 LAKSKSIAEVELLVQEREWLTATAEANRLQSEQDILRAKAHSLVQTRMHYLAKIDRDNRE 280

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
             N   EI   L+Q Q         + +++K R+Q T+ +P+AG I
Sbjct: 281 RLNKTHEIIHQLQQEQ---------IKMMDKQRQQ-TLRAPVAGVI 316


>gi|88811165|ref|ZP_01126421.1| Secretion protein HlyD [Nitrococcus mobilis Nb-231]
 gi|88791704|gb|EAR22815.1| Secretion protein HlyD [Nitrococcus mobilis Nb-231]
          Length = 461

 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 77/393 (19%), Positives = 149/393 (37%), Gaps = 28/393 (7%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WS +   ++ V + G +  +     I SP  G +    +  G  + +G  L     +E  
Sbjct: 53  WSFIGHADVIVQAGGVLGPDGEERRIYSPVDGELVNIYLAEGMPVAKGDVLAR---VEAV 109

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           D I L   +++  +  +   +   D L ++  VLE+       Q+ D   + H    K  
Sbjct: 110 DAIQLATQALQA-KLKLTDAQQQHDLLPDRIRVLEQQLNLLRVQI-DQAQRLHD---KRV 164

Query: 154 NYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLR----ALLSSHQKDLTM 201
           N  I+ +    +++L + R+        +   R + E    L R      LS  Q D T 
Sbjct: 165 NQAIAKLGEEQRIRLGKARAQLREAKNELDYARAEAEKYERLFRSPGGGGLSRQQVD-TK 223

Query: 202 MKNLFEKNA---VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            +    K     +++ +L Q E  + K     +  + +    L  +   Y +  LE A  
Sbjct: 224 RREYAAKQTTYDLARAELAQFEVDLSKVYQSSQAEVQQTAEKLLSLRTQYAQKKLELATL 283

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL--SPIAGTIVYNQSFSSSNYAQQSQ 316
             E    L +  R  A+  ++++  +   E+  +L  +P+AG I         +    +Q
Sbjct: 284 ENEGQLQL-RIARATAEGAARVS-FDDIDEENLLLVRAPVAGVITRLALTQPGDKVVAAQ 341

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           P+  I P      ++  +   +   +++G  A ++FP +   R    +  +E I P  S 
Sbjct: 342 PIASIAPAGARPVLQVAIGETERAFLQEGMPAKLKFPAFPYQRYGLIEGTLEYISPTASA 401

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              N Q      + L+    +  +  I LR G 
Sbjct: 402 NAQNKQPTYKGRIGLQRDSFSVGNTQIPLRYGM 434


>gi|332161832|ref|YP_004298409.1| hemolysin transport protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666062|gb|ADZ42706.1| hemolysin transport protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 464

 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 65/329 (19%), Positives = 144/329 (43%), Gaps = 23/329 (6%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WSI   ++I  S++G+++  ++   I+S   G++    V +G +++ G  LL    I   
Sbjct: 68  WSIAGRLDIHASANGKVIVAEHSKIIQSLEPGVVVAINVHDGDRVVAGQVLLELNPIG-- 125

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +D +  +I     H   E + +  L     +    +     + L    K  S  +K +
Sbjct: 126 --VDAEVNNINQQLMHRSLEAARMSALLTDDPLAHFIYPDNSPENLVMTAK--SLLTKEY 181

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +   + + R    +      I     ++ +  +L++ +   HQ+ L  ++ L +  A+++
Sbjct: 182 DEVNAELARQDSERAVNQAYIQAGNANITHHKALMKNI---HQR-LQALQTLVKSKAIAE 237

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++  QER    ++ E    +  ++ +LR   ++ + A +   +YL E  R  ++     
Sbjct: 238 AEVLIQEREWLNASAE-GNRLESEQAVLR--AKMRNLAQVRL-HYLAEKKRSYQEQLNKA 293

Query: 274 ADEMSKL-----TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            + +++L      ++EK R+Q ++ +P+ G I  +   +       +QPLM +VP S   
Sbjct: 294 HEVINQLKQELVKLMEKQRQQ-SLRAPVDGVIQQSTVHTLGGVVTSAQPLMVLVPESHQL 352

Query: 329 YIRAKVTPKQIQHVKKGYTATVR---FPH 354
            +   +  K I  V  G +  V+   FP+
Sbjct: 353 ELDVMILNKDIGFVLPGQSVEVKVDSFPY 381


>gi|254488557|ref|ZP_05101762.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. GAI101]
 gi|214045426|gb|EEB86064.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. GAI101]
          Length = 437

 Score = 41.2 bits (95), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 64/334 (19%), Positives = 137/334 (41%), Gaps = 27/334 (8%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE-DIET 92
           W I   I  ++ +SG +  E N   ++ P  G++ +  V +G  +  G  LL  +  +E 
Sbjct: 34  WGIQSRIAGAIIASGSVQVESNRQVVQHPKGGVVGEILVHDGDMVSAGDVLLRLDASLER 93

Query: 93  TDL--IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTC 149
            +L  I+ +   I   +  ++ E+  LD L     + E  A ++  ++L+D   +     
Sbjct: 94  AELAIIEGQLYEILARKARLEAERDGLDDLVISDHLREALADDATVQRLIDGQQRLFEAR 153

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +         +   +     +++        LE +    R L+    KD    + LFEK 
Sbjct: 154 ATTLQQKSEQISEQINQTENQIKGATAQLAALETQ----RTLIEVELKD---SETLFEKG 206

Query: 210 ---AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS--- 263
              A   + L +++  +      L   + E ++ +  +N       +   + ++E +   
Sbjct: 207 LSPAARVSSLRREQARLNGEIGSLDAKVAEMRDRIASLNI----ETISLTSRIREDAITT 262

Query: 264 -RDLEQNQ-RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            RDL+ ++   F   +S     ++T  +  I SP++G I  +  F+  +    ++P+M +
Sbjct: 263 LRDLQFSETELFQRRLSS----KETLSRMEIRSPVSGIIYGSTIFALQSVVSAAEPVMFV 318

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           +P  +   I A +    +  V  G  A +RF  +
Sbjct: 319 IPQDRSLVISASIDAIHVDQVHVGQVADLRFAAF 352


>gi|90411168|ref|ZP_01219181.1| putative secretion protein, HlyD family protein [Photobacterium
           profundum 3TCK]
 gi|90328014|gb|EAS44335.1| putative secretion protein, HlyD family protein [Photobacterium
           profundum 3TCK]
          Length = 464

 Score = 41.2 bits (95), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 89/443 (20%), Positives = 172/443 (38%), Gaps = 78/443 (17%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + ++  I  I W+ +  ++     +G+++    +  +++   GI+K+  
Sbjct: 26  NTPHSARIMLWVMVLFFIVAIAWASVAKLDKVTVGTGKVIPSSQLQIVQNLEGGIVKEVL 85

Query: 72  VENGSQILQGTPLLTFEDI--------ETTDLIDLKKVSIK-----------------NL 106
           ++ G  + Q   LL  +D          T +L   +  SI+                 N 
Sbjct: 86  IKEGQHVEQNQKLLLIDDTLFRSDFRERTQNLAGSQADSIRLNALLNSVTVNKKNANSNW 145

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL-GKYHSTCSKVFNYGISSVYRSLK 165
           R  +D + + L F  N        FE + ++L+     +Y+   S V N  +S + + + 
Sbjct: 146 RKSVDIKDNILKFDAN--------FEDKHKRLVQRQKNEYNDKISNVQNQ-LSGMAQQIS 196

Query: 166 MKLTRMRSIYLNRLDLENKSSL--LRALLSSHQKDLTMMKNLFEKNAVS-------QNDL 216
            K          R  +E KS +  LR   +   K+  + K L ++  V        Q  L
Sbjct: 197 QK---------ERELIETKSRMNNLRRSYNIASKEYNITKPLADEGVVPKIELLKLQRQL 247

Query: 217 NQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           N  +R +  + L++   +  I E   + ++IN          +N+  E   +L +     
Sbjct: 248 NDTKRELTSAELQIPVTQATIQEV--IFKYINIA--------SNFRSEAQAELNETSDQL 297

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
              +     LE    +  +LSP+ GTI      +     Q    L++IVP      I AK
Sbjct: 298 DSLLESQVGLEDRVNRTVVLSPVTGTIQKIYVNTVGGVIQPGMDLVEIVPSEDNLLIEAK 357

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVIL 391
           + P+ I  ++      ++F  Y           +E I  D I  ++ N+     YY+V +
Sbjct: 358 IAPQDIGFLRPDLPVMLKFSAYDFTVYGGLSGYLETISADTIQDEEGNS-----YYQVRI 412

Query: 392 KITDLAFSDNNIELRNGFPAEVL 414
           +       DN ++  +G P  ++
Sbjct: 413 RT-----EDNTLKGPDGEPLPII 430


>gi|303246857|ref|ZP_07333134.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio fructosovorans JJ]
 gi|302491874|gb|EFL51754.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio fructosovorans JJ]
          Length = 457

 Score = 41.2 bits (95), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 76/392 (19%), Positives = 146/392 (37%), Gaps = 52/392 (13%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           I+  + ++ L  +   V++ G++++    V + +  + +I++  V  G  + +G PL+  
Sbjct: 56  ILCALLFACLAKVNRIVAAPGKLVSSRRNVTVAALETAVIRQIYVSAGQSVAKGDPLVAL 115

Query: 88  ED-IETTDLIDLKK------VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           +  +    L++ +K        +  L C           L      LE+           
Sbjct: 116 DPTLAQAGLVEREKDWQSLAAKVWRLTCETGGSCKPPAGLTEADLALERGL--------- 166

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLT--------RMRSIYLNRLDLENKSSLLRALL 192
            L +     +K  +  ++   R L  KL           + I L R DLE        + 
Sbjct: 167 LLARRQEHAAKAES--LARQVRELSAKLATNAAEAAKNKKQIALAR-DLEK-------MY 216

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +   K     K  + K   S+ D   Q   +     ELRE++   +   R          
Sbjct: 217 ADIYKQGASSKVEYMKAQSSRIDAEGQLTKLTSEAAELRESLARAEAQARDFE------- 269

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              +N+  E ++DL +  R+ A    +    E  R+Q  + +P  G ++   + ++   A
Sbjct: 270 ---SNWQAEAAKDLAEASRSLAAADQEKRKAEHLRDQVILRAPEDGLVLDVAAKAAGAVA 326

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            Q + L+ IVP        A+V  + I  V+ G    ++F  +   R      ++  I P
Sbjct: 327 GQGETLLTIVPRGDDLVAEAEVAAQDIGRVRIGDQVRLKFEAFPFQRHGTATGVVRTISP 386

Query: 373 IISQQDNNLQTQE----YYEVILKITDLAFSD 400
              ++    QTQE     Y V   IT  A ++
Sbjct: 387 DAFEK----QTQEGQRLVYRVRAAITQAALTN 414


>gi|226940183|ref|YP_002795256.1| HlyD family secretion protein [Laribacter hongkongensis HLHK9]
 gi|226715109|gb|ACO74247.1| probable HlyD family secretion protein [Laribacter hongkongensis
           HLHK9]
          Length = 487

 Score = 41.2 bits (95), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 96/234 (41%), Gaps = 16/234 (6%)

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDEANL 253
           ++L + + L +  AVS+ DL + ER + +   E       I   +  +       +E  L
Sbjct: 246 QELRVTRPLKDVGAVSEVDLLRLERDLARFRGERDMAGAQIPRTQAAIDEARRKIEEVEL 305

Query: 254 EFANYLKEISRDLEQNQRTF-ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            F N   E S  L +      A     + + +K R Q  I SP+ G +    + +     
Sbjct: 306 AFRN---EASTQLTETMGKLNALSEGSVALQDKVR-QTEIRSPVRGEVKQLFTNTVGGVV 361

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-- 370
           Q  + +++IVP      +  +++P+ I  +  G  A VRF  Y        + ++E I  
Sbjct: 362 QPGKDIIEIVPLEASLLLETRISPRDIAFLHPGQKAVVRFTAYDFTIYGGMEGVLETIGA 421

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLA 423
           D I  ++ N      +Y V ++       D  + +  G  A+V + T K T L+
Sbjct: 422 DTITDEKGNA-----FYVVKVRTKGATLGDMKLPIIPGMVAQVDIMTGKKTVLS 470


>gi|226328859|ref|ZP_03804377.1| hypothetical protein PROPEN_02760 [Proteus penneri ATCC 35198]
 gi|225202045|gb|EEG84399.1| hypothetical protein PROPEN_02760 [Proteus penneri ATCC 35198]
          Length = 243

 Score = 41.2 bits (95), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 6/142 (4%)

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           AN+ +    +L Q Q   ++   +L I     ++  I +PI+G ++    F+     +  
Sbjct: 97  ANFYQSARTELNQVQLQISETEKQLIIEIDKLKKMQITAPISGIVMDLSVFTQGGVVRTG 156

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPI 373
           Q LM IVP      I A++ P  I  V  G    + F  +      K    +  I  D +
Sbjct: 157 QTLMDIVPQDHQLIIEARLAPHLIDKVTLGLPVDLMFSAFNQNTTPKIPGEVTLISADRL 216

Query: 374 ISQQDNNLQTQEYYEVILKITD 395
           I ++     T+ YY+V + + D
Sbjct: 217 IDER----TTEPYYQVFINVKD 234


>gi|152994821|ref|YP_001339656.1| HlyD family type I secretion membrane fusion protein [Marinomonas
           sp. MWYL1]
 gi|150835745|gb|ABR69721.1| type I secretion membrane fusion protein, HlyD family [Marinomonas
           sp. MWYL1]
          Length = 403

 Score = 41.2 bits (95), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 71/348 (20%), Positives = 140/348 (40%), Gaps = 85/348 (24%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           +  ++  + W+    I+    + GE++    V  I+S   G+I +  V  G ++  G  L
Sbjct: 35  LTALVAFVVWAEYFYIDEVAQAQGEVIASSRVQLIQSVDGGVISELNVREGDRVQAGQIL 94

Query: 85  ---------LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDV--LEKA 130
                     +  +IE+  +  LK  +I+ LR  I  +K      D L+   D+  +EKA
Sbjct: 95  GQLDQTRLSASVGEIESR-VFALKAKAIR-LRAEILGDKKLTFPQDMLSRYQDIAQVEKA 152

Query: 131 -FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            FE R                     GI    R+L++ ++                    
Sbjct: 153 LFEQR-------------------KTGIKEELRTLQVSVS-------------------- 173

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE-QKNMLRHINELY 248
             L+  ++D+  +K+L     VS +++           L+ RE ++  +  ++   N+  
Sbjct: 174 --LAQEEQDI--VKHLQASGDVSSSEM-----------LKAREALNAAEAKLINRKNQFL 218

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +EA+ E A     +  DL Q+++  A +  +L       +    ++ + G IV N S ++
Sbjct: 219 EEASAELAK----VEDDLGQSEQILARKQQEL-------QDSVFIAKVPG-IVKNVSVTT 266

Query: 309 -SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
                +  + +M+I+P      + AK+ P+ I  VK G  A +R   +
Sbjct: 267 VGGVLRAGEEIMQIIPIDDELLVEAKIRPQDIARVKPGLLANIRLDPF 314


>gi|157960195|ref|YP_001500229.1| HlyD family type I secretion membrane fusion protein [Shewanella
           pealeana ATCC 700345]
 gi|157845195|gb|ABV85694.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           pealeana ATCC 700345]
          Length = 460

 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 77/397 (19%), Positives = 146/397 (36%), Gaps = 82/397 (20%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           +  + W+    ++   +  G+++    V  I+S   GI+++  V+ G  + +G PL    
Sbjct: 40  VTFLVWAYFAELDQVTTGMGKVIPSSQVQVIQSLDGGILQEMYVQEGLIVTKGQPL---- 95

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
                                ID  +   DF   + +V           L+  + +  + 
Sbjct: 96  -------------------VRIDATRFQSDFAQQEQEV---------NSLVANVVRLQAE 127

Query: 149 CSKVFNYGISSVYR-SLKM----------------KLT-RMRSIYLNRLD---------- 180
            + +   GI++ +R  +K+                KLT R R  Y  RLD          
Sbjct: 128 LNSITISGITNDWREQVKISPQPLIFPAALEEGDPKLTNRQREEYTGRLDNLSNQLEIQA 187

Query: 181 ---------LENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
                    ++  +S +R L +S Q   ++L + + L EK  V + +L + +R+V     
Sbjct: 188 RQIQQRNQEIQELASKIRTLTTSFQLVSRELELTRPLAEKGIVPEVELLKLQRVVNDIQG 247

Query: 229 ELRENIHEQKNMLR-HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           EL         +LR  +    DEA L+    +   + D          ++S++   +   
Sbjct: 248 EL-----ASLRLLRPKVKSTMDEAILKRRESVLIYAADSRAQLNEMQTKLSRMNEAQVGA 302

Query: 288 EQKT----ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           + K     I+SP+ GT+      +     Q    +++IVP      I  K+ PK I  + 
Sbjct: 303 QDKVSKAEIVSPVNGTVKTIHINTLGGVVQPGVDIIEIVPSEDKLLIETKIIPKDIAFLH 362

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
            G  A V+   Y   R      ++E I    +Q +  
Sbjct: 363 PGLPAVVKVTAYDFTRYGGLNGVVEHISADTTQDEEG 399


>gi|300694055|ref|YP_003750028.1| cation transporter transmembrane protein [Ralstonia solanacearum
           PSI07]
 gi|299076092|emb|CBJ35403.1| putative cation transporter transmembrane protein [Ralstonia
           solanacearum PSI07]
          Length = 382

 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 15/123 (12%)

Query: 264 RDLEQNQRTFADEMS-------KLTIL-EKTREQKT------ILSPIAGTIVYNQSFSSS 309
           RDLE  Q  +A  +S       +L  L  K   Q T      + SPIAG +V   +    
Sbjct: 163 RDLELAQNDYAQAVSEADRANNRLAQLGAKGGAQVTGGHILAVRSPIAGRVVDLNAAIGG 222

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            +   + P+M +   S++ ++ A    K +  V  G  ATV+   YAD    K + + E 
Sbjct: 223 YWNDATAPVMTVADLSRV-FVTASAQEKDLAQVYVGQAATVKLDAYADALPAKVRLVGEI 281

Query: 370 IDP 372
           +DP
Sbjct: 282 LDP 284


>gi|254490550|ref|ZP_05103736.1| type I secretion membrane fusion protein, HlyD family [Methylophaga
           thiooxidans DMS010]
 gi|224464294|gb|EEF80557.1| type I secretion membrane fusion protein, HlyD family [Methylophaga
           thiooxydans DMS010]
          Length = 443

 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 55/246 (22%), Positives = 107/246 (43%), Gaps = 30/246 (12%)

Query: 181 LENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLEL-RENI 234
           L    S L  L +S++   ++L M + L     +S+ ++ + +R V   +  +E  R  I
Sbjct: 181 LRETQSKLNKLRTSYELSNQELGMSEPLVSVGVISEVEILRLKRTVNELRGDMETTRLAI 240

Query: 235 HEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              ++ L  + +  ++A L F    A+ L E+  +L + Q T      ++T       + 
Sbjct: 241 PRIRSSLSEVKQKIEDAKLRFQSESASQLSEVQSELARTQETVTSAEDRVT-------RT 293

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P+ G I      +     Q  + L++IVP      + A + P  I  ++ G  A V
Sbjct: 294 QVRAPVKGKINRLMINTVGGVIQPGEDLVEIVPVEDNLLVEAHIRPSDIAFLRPGQNAMV 353

Query: 351 RFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           +F  Y         A +E+I  D I +++D +     +Y + L+       +NNI+   G
Sbjct: 354 KFTAYDFSIYGGLPATLERISADTITNEEDES-----FYIIYLRT-----KENNIDSSKG 403

Query: 409 FPAEVL 414
            P E++
Sbjct: 404 -PLEII 408


>gi|161505277|ref|YP_001572389.1| hypothetical protein SARI_03418 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866624|gb|ABX23247.1| hypothetical protein SARI_03418 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 425

 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 78/183 (42%), Gaps = 12/183 (6%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA---QQSQPL 318
           +S+ + +NQ+      S L ++EK  +++ I SP+ G ++Y  + S++ +    Q +  L
Sbjct: 237 LSKLISKNQQELEVVNSTLKVIEKQLDEEDIYSPVDG-VIYKINKSATTHGGVIQAADLL 295

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            +I P  K      K+ PK    +       +        + K + A I+ I P   +++
Sbjct: 296 FEIKPKVKTMLADVKIPPKYRDQIYLDEAVKLDVQSIIQPKMKSYSATIDNISPDSYEEN 355

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELR---NGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
                Q YY+VI     ++F  N  +LR    G   +        ++ + ++ P+     
Sbjct: 356 TGGTIQRYYKVI-----ISFDVNEDDLRWLKPGMTVDASIITGKHSIMEYLLSPLMKGVD 410

Query: 436 KIF 438
           K F
Sbjct: 411 KAF 413


>gi|23013550|ref|ZP_00053432.1| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 468

 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 79/381 (20%), Positives = 143/381 (37%), Gaps = 48/381 (12%)

Query: 9   LKRNHPASLKRMT-LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L+ +  + L R T LL+       + W+    +    ++ G+++    V  ++    GI+
Sbjct: 47  LEESGTSGLVRFTMLLASATTAAFVIWAAFTDVPEIATAEGQVIPSGQVQAVQHLEGGIV 106

Query: 68  KKFQVENGSQILQGTPLL------TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF-- 119
           ++    +G  +  G P++         D+E T   +   + IK  R     E+   DF  
Sbjct: 107 QEIVAHDGDLVEAGAPIVRLNPAQAISDLEQTRARE-ATLLIKAERLRALAEERQPDFSQ 165

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +   YD L          + D +  ++S  S+  +   S +   ++ K + +R       
Sbjct: 166 MPKGYDRL----------IADNMAIFNSQ-SQARDTSRSVILSQMEQKRSDLRL------ 208

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            LE++   LR  L   Q+++TM + L  K  VS        R+V+  T   RE    Q  
Sbjct: 209 -LESQERSLREQLGPLQEEMTMRQELVAKGLVS--------RVVFLDT--KRELSRVQGE 257

Query: 240 MLRHINE--LYDEANLEFANYL--------KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           + R + +     EA  E  N L        K    DL       A     +  LE    +
Sbjct: 258 LARLVGQEVTAREAYSEVENRLMDNKSSLQKATMDDLGTTVNELAQVQESIGRLEDRVAR 317

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I++P+ G +      +     Q    + ++VP      + AK+  K + H+K G    
Sbjct: 318 LDIVAPVRGLVKGLMVKNQGAVIQAGGNVCEVVPVDTQMKVDAKINTKDVGHLKIGQPVR 377

Query: 350 VRFPHYADIREKKFKAIIEKI 370
           V+   Y   R       + KI
Sbjct: 378 VKVTTYDFARYGAVDGTLSKI 398


>gi|268679616|ref|YP_003304047.1| secretion protein HlyD [Sulfurospirillum deleyianum DSM 6946]
 gi|268617647|gb|ACZ12012.1| secretion protein HlyD family protein [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 439

 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 75/343 (21%), Positives = 146/343 (42%), Gaps = 26/343 (7%)

Query: 17  LKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           L R  L  I G+I   I W     I+I VS+ G+++    +  ++   +G+I K  V+ G
Sbjct: 28  LGRSILWIIFGVIFFGIMWLSFAKIDIVVSARGKVVPSGEIKVLQPIETGVISKILVKEG 87

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +   L+  +   T   +  K+   K+L  H    +     + N+     K FE  +
Sbjct: 88  EHVEKDQVLMQIDPSVTQTSLASKE---KDLIVHTLENERLSALVENRKPKWSK-FEHLD 143

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY-LNRLDLENKSSLLRALLSS 194
           + LL      HS         +S+      MK ++ R+ Y  ++ D++     L  LL  
Sbjct: 144 QALLREQKDLHSHQRD----SLSASKSQYAMKKSQARAQYNSSKSDVQR----LEGLLHK 195

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL-RENIHEQKNMLRHINE---LYDE 250
            Q  L  M+ + +  A ++ +  Q+    ++  L + R   HE K  L+ + +   +Y E
Sbjct: 196 EQTRLQRMEKVLDIIARNEYEEVQKNAHNFREQLHMARHKEHESKQHLKEVEQEEKVYVE 255

Query: 251 ANLE-FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            ++  + N L E  ++L    RT   E++ +    +   Q+ I +P++G I      +  
Sbjct: 256 QSISTWFNQLLEKKKEL----RTLESEVNAIAFQNR---QQQIKAPLSGYIGKLMVNTEG 308

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
                ++ L+ +VP      I+A V  + I  + K  +A ++ 
Sbjct: 309 GVVTPAEKLISLVPDDAPLIIKATVLNQDIGFITKQMSAAIKI 351


>gi|293370239|ref|ZP_06616799.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CMC 3f]
 gi|299146206|ref|ZP_07039274.1| putative ABC transport system, lipoprotein [Bacteroides sp. 3_1_23]
 gi|292634736|gb|EFF53265.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CMC 3f]
 gi|298516697|gb|EFI40578.1| putative ABC transport system, lipoprotein [Bacteroides sp. 3_1_23]
          Length = 309

 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 90/197 (45%), Gaps = 28/197 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R DL  + +  +  +++ +++   ++NL    A +Q  L+  +  V    LE 
Sbjct: 92  MKSVESQRPDLAKQIAATKQQIATAEREKKRVENLLAAGAANQKQLDDWDAQV--KLLE- 148

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R+ + ++ ++    N L ++ N         ++  + Q      D+++K           
Sbjct: 149 RQLVAQESSLQNSTNSLIEQGN--------SVAIQVAQ----MEDQLAKC---------- 186

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + SPI GT++   +  +   A   +PL K+    ++ Y+RA +T +Q+  VK G   TV
Sbjct: 187 HVQSPIEGTVLAKYA-EAGELAAIGKPLFKVAEVDRM-YLRAYITSEQLSQVKLGDEVTV 244

Query: 351 RFPHYADIREKKFKAII 367
            +  Y +  +K +  ++
Sbjct: 245 -YADYGNSEQKAYPGVV 260


>gi|163740050|ref|ZP_02147454.1| Type I secretion membrane fusion protein, HlyD [Phaeobacter
           gallaeciensis BS107]
 gi|161386681|gb|EDQ11046.1| Type I secretion membrane fusion protein, HlyD [Phaeobacter
           gallaeciensis BS107]
          Length = 435

 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 91/461 (19%), Positives = 173/461 (37%), Gaps = 81/461 (17%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A L  M LL    + GL  W+    I  +V +SG I  E N   ++ P+ G++ +  V  
Sbjct: 16  AGLLAMGLL----VGGLGQWAATAEISGAVIASGSIKVEQNRQVVQHPYGGVVDEVLVSE 71

Query: 75  GSQILQGTPLLTFEDIE----------------------TTDLIDLKKVSIKNL-----R 107
           G  + +   LL  E  E                      + +  + ++V+   L      
Sbjct: 72  GDLVEEDALLLRLEPSELLAERQIVEGQLAETLARRSRYSAERDEAEEVTFAELLFELSG 131

Query: 108 CHIDTEKSALDFLNNKYDVLEKAF---ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            H+ TE    + +N +  + E       +R  +L + +G+  S        GI +   +L
Sbjct: 132 THVQTE----ELINGQKRLFEARLVNLRARISRLQERVGQIQSQID-----GIEAQQSAL 182

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + +L     + + + +LEN+ SLL   L+   + L++ +        +   L  Q+    
Sbjct: 183 QEQL-----VLIGK-ELENQQSLLSQGLAQSSRVLSLQREQSRLRGQA-GALTAQKAQAE 235

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQR--TFADEMSKLT 281
               EL   I  Q +  R           E    L+++  R+LE  +R       +S+L 
Sbjct: 236 GQVTELGLEILNQTSARRE----------EAITTLRDLQVRELELIERRNVILQRLSRLD 285

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +           +P+AG +     F+  +  + + PLM ++P S+   I A+V P  I  
Sbjct: 286 VR----------APMAGVVYDLNVFARKSVIRAADPLMYLIPQSQPLVISAQVAPSDIDQ 335

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA---- 397
           V      ++ F  +    ++    +   +  + +    + QT   Y V+    +      
Sbjct: 336 VYLNQPVSLNFSSF---NQRTTPTLFGTVSTVSADSFVDPQTGRSYYVVEARLNKGEIDR 392

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             + N+ L  G P E      + T    ++ P TD   + F
Sbjct: 393 LPEGNV-LVPGMPVETFIQTNSRTPFAYLLQPFTDYLNRAF 432


>gi|237719432|ref|ZP_04549913.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229451292|gb|EEO57083.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 301

 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 91/197 (46%), Gaps = 28/197 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R DL  + +  +  +++ +++   ++NL    A +Q  L+  +  V    LE 
Sbjct: 84  MKSVESQRPDLAKQIAATKQQIATAEREKKRVENLLAAGAANQKQLDDWDAQV--KLLE- 140

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R+ + ++ ++    N L ++ N         ++  + Q +    D+++K           
Sbjct: 141 RQLVAQESSLQNSTNSLIEQGN--------SVAIQVAQME----DQLAKC---------- 178

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + SPI GT++   +  +   A   +PL K+    ++ Y+RA +T +Q+  VK G   TV
Sbjct: 179 HVQSPIEGTVLAKYA-EAGELAAIGKPLFKVAEVDRM-YLRAYITSEQLSQVKLGDEVTV 236

Query: 351 RFPHYADIREKKFKAII 367
            +  Y +  +K +  ++
Sbjct: 237 -YADYGNSEQKAYPGVV 252


>gi|332305989|ref|YP_004433840.1| type I secretion membrane fusion protein, HlyD family [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173318|gb|AEE22572.1| type I secretion membrane fusion protein, HlyD family [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 476

 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 101/237 (42%), Gaps = 23/237 (9%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN---IHEQKNMLRHINELYDEAN 252
           Q++L + + L +  A+S  D+ + ER + +   E++ N   I   ++ ++       E  
Sbjct: 235 QRELAVTRPLLKSGAISDIDIIRLERQLVEIEGEIKRNESVIRRNESAIKEAKSKIREKE 294

Query: 253 L----EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           L     + N L ++S +L   + T +        L     Q  + SP+ GTI      + 
Sbjct: 295 LTTTNRWRNELSDVSTELNSLKETESG-------LADVVYQADLKSPVKGTIKRLFINTI 347

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                    +++I+P      + AK+ P+ I  ++ G TA V+F  Y  +     +A + 
Sbjct: 348 GGVVPPGSDVIEIIPLDDQLIVEAKIKPQDIAFLRPGQTAMVKFTAYDFVIYGGLEAEVT 407

Query: 369 KI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTL 422
            I  D I  + D     + YY V L+    +F  N +++  G   +V + T K T L
Sbjct: 408 HISADTITDEND-----ETYYVVRLQTDSNSFK-NGMQIIPGMTTQVDIITGKKTVL 458


>gi|260174415|ref|ZP_05760827.1| hypothetical protein BacD2_21342 [Bacteroides sp. D2]
 gi|315922683|ref|ZP_07918923.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696558|gb|EFS33393.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 309

 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 90/197 (45%), Gaps = 28/197 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R DL  + +  +  +++ +++   ++NL    A +Q  L+  +  V    LE 
Sbjct: 92  MKSVESQRPDLAKQIAATKQQIATAEREKKRVENLLAAGAANQKQLDDWDAQV--KLLE- 148

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R+ + ++ ++    N L ++ N         ++  + Q      D+++K           
Sbjct: 149 RQLVAQESSLQNSTNSLIEQGN--------SVAIQVAQ----MEDQLAKC---------- 186

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + SPI GT++   +  +   A   +PL K+    ++ Y+RA +T +Q+  VK G   TV
Sbjct: 187 HVQSPIEGTVLAKYA-EAGELAAIGKPLFKVAEVDRM-YLRAYITSEQLSQVKLGDEVTV 244

Query: 351 RFPHYADIREKKFKAII 367
            +  Y +  +K +  ++
Sbjct: 245 -YADYGNSEQKAYPGVV 260


>gi|330995808|ref|ZP_08319705.1| hypothetical protein HMPREF9442_00774 [Paraprevotella xylaniphila
           YIT 11841]
 gi|329574538|gb|EGG56103.1| hypothetical protein HMPREF9442_00774 [Paraprevotella xylaniphila
           YIT 11841]
          Length = 326

 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 33/249 (13%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER--IVYKS 226
            +MRSI   R D+  + +  R  ++  + +     NL  +NA +Q  ++  E    V K 
Sbjct: 108 AQMRSIGSRRADVAKQVAATREQIAKAELERKRSLNLLAQNAGTQKQVDDVESQLAVLKK 167

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            LE + +     N  + + E  D A ++                R   D+      LEK 
Sbjct: 168 QLEAQLSTLNLGN--QGVTEEGDAAEIQI---------------RQTEDQ------LEKC 204

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           R    I+SPI+GT++   +        Q +PL K V   K  ++RA V   Q+  VK G 
Sbjct: 205 R----IVSPISGTVLTKYA-ERGEVTAQGKPLFK-VADMKHVFLRAYVGGDQLSAVKLGQ 258

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              V   + A+ R K++K  I  I          +QT++    ++    +A  ++   L+
Sbjct: 259 AVKVYADYGAEDR-KEYKGKITWISGQAEFTPKTIQTRDERANLVYAVKIAVENDGF-LK 316

Query: 407 NGFPAEVLF 415
            G   EV F
Sbjct: 317 LGMYGEVKF 325


>gi|302873718|ref|YP_003842351.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium cellulovorans 743B]
 gi|307690049|ref|ZP_07632495.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium cellulovorans 743B]
 gi|302576575|gb|ADL50587.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium cellulovorans 743B]
          Length = 487

 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 13  HPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            P    R  +  II ++  +ITWS     +I+V S G +  ++ + ++ S  +GI+    
Sbjct: 21  RPKGFSRYMMYIIIALLATVITWSCFAKKQITVKSQGVVRPQEEIFKVASGTAGIVTSLN 80

Query: 72  VENGSQILQGTPLLTFEDIETT 93
           ++ G ++ +G  LL     E T
Sbjct: 81  MKEGMEVKKGDVLLVVNGQELT 102


>gi|294012686|ref|YP_003546146.1| multidrug resistance protein A [Sphingobium japonicum UT26S]
 gi|292676016|dbj|BAI97534.1| multidrug resistance protein A [Sphingobium japonicum UT26S]
          Length = 351

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 5/85 (5%)

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           E   + +PIAG +V N+             L+ IVP + L Y+ A     Q++H++ G  
Sbjct: 216 ENTVVRAPIAG-VVGNRQVRVGRLVAPGASLLDIVPVADL-YVVANFKETQLEHIRPGQG 273

Query: 348 ATVRFPHYADIREKKFKAIIEKIDP 372
           A +R   Y D+     K +++ + P
Sbjct: 274 ARIRVDGYPDV---VIKGVVDSLAP 295


>gi|163743536|ref|ZP_02150914.1| type I secretion membrane fusion protein, HlyD family [Phaeobacter
           gallaeciensis 2.10]
 gi|161383239|gb|EDQ07630.1| type I secretion membrane fusion protein, HlyD family [Phaeobacter
           gallaeciensis 2.10]
          Length = 435

 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 92/459 (20%), Positives = 174/459 (37%), Gaps = 77/459 (16%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A L  M LL    + GL  W+    I  +V +SG I  E N   ++ P+ G++ +  V  
Sbjct: 16  AGLLAMGLL----VGGLGQWAATAEISGAVIASGSIKVEQNRQVVQHPYGGVVDEVLVSE 71

Query: 75  GSQILQGTPLLTFEDIE----------------------TTDLIDLKKVSIKNL-----R 107
           G  + +   LL  E  E                      + +  + ++V+   L      
Sbjct: 72  GDLVEEDALLLRLEPSELLAERQIVEGQLAETLARRSRYSAERDEAEEVTFAELLFELSG 131

Query: 108 CHIDTEKSALDFLNNKYDVLEKAF---ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            H+ TE    + +N +  + E       +R  +L + +G+  S        GI +   +L
Sbjct: 132 THVQTE----ELINGQKRLFEARLVNLRARISRLQERIGQIQSQID-----GIEAQQSAL 182

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + +L       L   +LEN+ SLL   L+   + L++ +        +   L  Q+    
Sbjct: 183 QEQLV------LIGQELENQQSLLSQGLAQSSRVLSLQREQSRLRGQA-GALTAQKAQAE 235

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTIL 283
               EL   I  Q++  R           E    L+++  R+LE  +R     + +L+ L
Sbjct: 236 GQVTELGLEILNQRSARRE----------EAITTLRDLQVRELELIERRNLI-LQRLSRL 284

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E       + +P++G +     F+  +  + + PLM ++P S+   I A+V P  I  V 
Sbjct: 285 E-------VRAPVSGLVYDLNVFARKSVIRAADPLMYLIPQSQPLVISAQVAPSDIDQVY 337

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA----FS 399
                ++ F  +    ++    +   +  + +    + QT   Y V+    +        
Sbjct: 338 LNQPVSLNFSSF---NQRTTPTLFGTVSTVSADSFVDPQTGRSYYVVEARLNKGEIDRLP 394

Query: 400 DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           + N+ L  G P E      + T    ++ P TD   + F
Sbjct: 395 EGNV-LVPGMPVETFIQTNSRTPFAYLLQPFTDYLNRAF 432


>gi|241761505|ref|ZP_04759593.1| type I secretion membrane fusion protein, HlyD family [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|241374412|gb|EER63909.1| type I secretion membrane fusion protein, HlyD family [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
          Length = 393

 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 6/203 (2%)

Query: 191 LLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           L  S +  L M + +L ++ A+ +N+L   E +V +      E +     + R ++E+  
Sbjct: 145 LYRSRRNSLAMGLSDLHQQLALIKNELTMTEPLVARGAASDVEVLR----LKRQVSEIDT 200

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A+     Y+ +   DLE+ +     + S         ++ T  SP+ G +   +  +  
Sbjct: 201 RADDMQNQYMVKAREDLEKAEAEAKAQQSVTKGRSDMLDRLTFTSPVRGIVKDIEVTTKG 260

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                +  LM IVP  +   + A+++P+ I  +  G  ATV+   Y         A +  
Sbjct: 261 GVIPPNGRLMTIVPLDEQLLVEARISPRDIAFIHPGQRATVKLTVYDYAIYGGLPAKVTV 320

Query: 370 IDPIISQQDNNLQTQEYYEVILK 392
           I P  + QD+  +   YY V ++
Sbjct: 321 ISP-DTVQDDVRKDSYYYRVWVR 342


>gi|254511015|ref|ZP_05123082.1| rb129 [Rhodobacteraceae bacterium KLH11]
 gi|221534726|gb|EEE37714.1| rb129 [Rhodobacteraceae bacterium KLH11]
          Length = 456

 Score = 40.8 bits (94), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 30/150 (20%), Positives = 62/150 (41%), Gaps = 5/150 (3%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P++G +V    F++    +  +P++ IVP  +   + AKV    I+ +  G +  V
Sbjct: 308 AVTAPVSGRVVGLTVFTAGGVVRPGEPILDIVPADQPLIVEAKVNTADIEKLYVGQSTRV 367

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNG 408
           R   +      +   +I  I     + D     + YY   +++ D A  +    +EL  G
Sbjct: 368 RLSAFDQGEVPEATGMITDISADSLEDDRT--GEPYYLAQVRL-DQAQPEQIAALELVPG 424

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            PA++       T    +  P+ +   + F
Sbjct: 425 MPADLFVNTGERTALSYLAQPLKERLARTF 454


>gi|332705500|ref|ZP_08425578.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
 gi|332355860|gb|EGJ35322.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
          Length = 517

 Score = 40.8 bits (94), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 77/391 (19%), Positives = 161/391 (41%), Gaps = 46/391 (11%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  K L    P    R  L  +I  IG+ + W+I   ++ +  + G +      +++ +P
Sbjct: 47  YATKELLDTLPQVWTRGLLYFLIVFIGIALPWAIFAQVDETGKARGRLEPTGETIKLDAP 106

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFE-DIETTDLID-----------------LKKVSIK 104
            +G +   +V+ G  +  G  LL  E ++ +T+L                   LK   I 
Sbjct: 107 VAGTVAAIKVKEGELVTAGQTLLELESELVSTELQQEQKKLEGQQNRLNQLEVLKNQLIL 166

Query: 105 NLRCH------IDTEKSA-LDFLNNKYDVLEKAFESREEQLLDFLGKYHST--CSKVFNY 155
            LR         + EK A ++      +  + A+  ++E+LL  + +       SKV  Y
Sbjct: 167 ALRTQEQQNQAQELEKQAQVEQARQNLEAFKFAYSLQKEELLAQIDQARQAIESSKV-AY 225

Query: 156 GISSV-YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN---------- 204
            + ++   S + K+ R ++ Y  +  + +K   L    S+ + + T+++           
Sbjct: 226 ELETIRLESAQEKIPRYQNAY--KEGVLSKERFLDVQQSAKEAEKTIIRTELEIKQAQSR 283

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E+    Q  ++Q    + +S L L+E     K ++ H  +L   A L+    LK I  
Sbjct: 284 LKEQQGTYQKTIHQASADIKQSRLRLQEQERSYKTLV-HSGKL---ALLKSEEQLKNIET 339

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            +   +   +   S++  LE   +Q+ + +PI G +  +   S+    Q    +++I P 
Sbjct: 340 QITTLKAEASQTKSQIKSLEIQLKQRMLAAPIEGIVFQSPIKSAGAVVQPGDTIVEIAPK 399

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
                +RA++   +   +++G    ++F  Y
Sbjct: 400 GSFLSLRAQIAISESGSLREGMAVKMKFDAY 430


>gi|17232796|ref|NP_489344.1| hypothetical protein all5304 [Nostoc sp. PCC 7120]
 gi|17134443|dbj|BAB77003.1| all5304 [Nostoc sp. PCC 7120]
          Length = 498

 Score = 40.8 bits (94), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 159/375 (42%), Gaps = 61/375 (16%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           + G I W+ L  I+    + GE++    V  + S   G IK  QV+ G ++ +   L+  
Sbjct: 53  VFGTIAWAALSEIDEVAVAQGELIASAQVRPVTSLGDGTIKAIQVKEGDRVTKDQVLIQR 112

Query: 88  E-DIETTDLIDLKKVS------IKNLRCHIDTEKSALDFLNNK--------YDVLEKAFE 132
           + D++ TD+  L + +      I+ L+      +S    + ++        Y   + A E
Sbjct: 113 DPDLKQTDVTRLAQSTKLIQQDIQRLQAERIGGQSTGTVIQDELLKSRLRDYQARQGAAE 172

Query: 133 ---SREEQLLD------------FLGKYHSTC---SKVFNY-GISS-VYRSLKMKLTRMR 172
              SR+  L+D             +    S     + +FN   ISS V  +L++  +R +
Sbjct: 173 AEASRQRSLIDQARVRLIRLQDNLVNARTSVANAKTNLFNARSISSKVEENLEIAQSREK 232

Query: 173 SI-------YLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           ++        + R+D LE +  L RA     Q D+T  ++    NA  QN L + E  V 
Sbjct: 233 NLRTLITPGAVPRVDYLEARERLTRA-----QTDITRAQDEV-INA--QNRLTEAEDKVT 284

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL--EQNQRT--FADEMSKL 280
                L ++I  Q   +R   + Y  A  +    + E   ++  E N+R     +   +L
Sbjct: 285 S----LEKDISAQDQEIRQAQQAYQAARNQAQRVVSERQSEILTEMNKRKEELTNVAGQL 340

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              +K  + +TI +P+AGTI   +  ++    Q  + L+ I+P  +   +  KV  + I 
Sbjct: 341 EQAKKQTDGETIKAPVAGTIYKIK--ATKGPVQSGEELLSILPEGEEMLLEVKVLNRDIG 398

Query: 341 HVKKGYTATVRFPHY 355
            ++KG  A V+   +
Sbjct: 399 FIRKGMRAKVKMATF 413


>gi|160885722|ref|ZP_02066725.1| hypothetical protein BACOVA_03726 [Bacteroides ovatus ATCC 8483]
 gi|156108535|gb|EDO10280.1| hypothetical protein BACOVA_03726 [Bacteroides ovatus ATCC 8483]
          Length = 309

 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 41/197 (20%), Positives = 90/197 (45%), Gaps = 28/197 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R DL  + +  +  +++ +++   ++NL    A +Q  L+  +  V    LE 
Sbjct: 92  MKSVESQRPDLAKQIAATKQQIATAEREKKRVENLLAAGAANQKQLDDWDAQV--KLLE- 148

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R+ + ++ ++    N L ++ N         ++  + Q      D+++K           
Sbjct: 149 RQLVAQESSLQNSTNSLIEQGN--------SVAIQVAQ----MEDQLAKC---------- 186

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + SPI GT++   +  +   A   +PL K+    ++ Y+RA +T +Q+  VK G   TV
Sbjct: 187 HVQSPIEGTVLAKYA-EAGELAAIGKPLFKVAEVDRM-YLRAYITSEQLSQVKLGDEVTV 244

Query: 351 RFPHYADIREKKFKAII 367
            +  Y +  +K +  ++
Sbjct: 245 -YADYGNSEQKAYPGVV 260


>gi|226941834|ref|YP_002796908.1| HlyD family secretion protein [Laribacter hongkongensis HLHK9]
 gi|226716761|gb|ACO75899.1| probable HlyD family secretion protein [Laribacter hongkongensis
           HLHK9]
          Length = 469

 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 124/289 (42%), Gaps = 41/289 (14%)

Query: 172 RSIY-LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK----- 225
           R +Y  +RL+LE   S+ R  L+  Q++L+ ++    + A S  DL  +E  V +     
Sbjct: 181 RGLYESSRLELEASVSIARQQLTQRQQELSEVRARASQAAQS-YDLTAKELAVTRPLKDV 239

Query: 226 ---STLELRENIHEQKNMLRHINELYDEANLEFAN---YLKEISRDLEQNQRTF------ 273
              S ++L   +  ++++ R+  E  ++AN +       + E SR +E+ + TF      
Sbjct: 240 GAVSDVDL---MRLERDVARYRGE-REQANAQIPKIQAAITEASRKIEEVELTFRNKASS 295

Query: 274 --ADEMSKL-------TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
             ++ MSKL         LE       I SP+ G +      +     Q  + +++IVP 
Sbjct: 296 ELSETMSKLNSLSEGSVALEDKVRLSEIRSPVNGEVKRLYLNTIGGVVQPGKDIVEIVPL 355

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQ 382
                +  +++P+ I  +  G  A VR+  Y        +  +E I  D I   + N   
Sbjct: 356 DDGLLLETRISPRDIAFLHPGQRAVVRYTAYDYTVYGGMEGEVENIGADTITDDKGNA-- 413

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLAQEIIHPI 430
              +Y V ++       +  + +  G  A+V + T K T L+  ++ P+
Sbjct: 414 ---FYIVKVRTKGSRLGEQKLPIMPGMVAQVDIMTGKKTILSY-LLKPV 458


>gi|260436565|ref|ZP_05790535.1| secretion protein HlyD [Synechococcus sp. WH 8109]
 gi|260414439|gb|EEX07735.1| secretion protein HlyD [Synechococcus sp. WH 8109]
          Length = 357

 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 35/240 (14%)

Query: 211 VSQNDLNQQERIV-YKSTLELRENIHEQKNMLRHIN-------ELYDEANLEFANYL--- 259
           V + D+ + E+++      +L + + E++ +LR  +       E ++  N  FA+ +   
Sbjct: 71  VDEGDVVENEQVLAVMDRGDLDDRLQEKQALLRQADANFKSRKEEFERKNQLFASGVISA 130

Query: 260 KEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS------- 309
            E S    DL   Q       +++  LE+   +KTI +P +GTI    +   S       
Sbjct: 131 DEFSGARFDLLARQAGLVAARARVEQLEQESREKTIRAPFSGTITARYAEPGSFVTPTTA 190

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
             A        IV  S+   +RA+V    I  ++ G TA +R   Y D   ++F+A + +
Sbjct: 191 ASATAGATSASIVELSQGLEVRARVPESDIGRIEPGQTAEIRVDAYPD---ERFQATVSE 247

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           + P  +++ N++ +   +EV L      F +   +L+ G  A++ F   N+  A +I+ P
Sbjct: 248 VAPRAAKE-NSVTS---FEVKLN-----FVNPQNKLKIGMTADINFQTGNS--APKILVP 296


>gi|307610216|emb|CBW99774.1| Legionella secretion system protein D [Legionella pneumophila 130b]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 33/262 (12%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           S+Y +R+   N+   L+  L   QK+L + + L +  +VS+ ++ + ER    S  E++ 
Sbjct: 135 SLYESRMRELNQ---LKKSLELAQKELDLTRPLLKGGSVSEVEVIRLER----SVSEIKG 187

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           NI + K+    +++L ++A  E    ++    D ++  RT                  T+
Sbjct: 188 NIEKFKS--EELDKL-NKARTELFALVEANKADKDRLTRT------------------TV 226

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ G +   ++ +     Q    L++IVP      I AK+ P  I  +  G  A V+ 
Sbjct: 227 RSPVYGIVKQIKTTTIGGVVQPGSDLLEIVPLDDTLLIEAKIRPSDIGFIHPGQKAMVKI 286

Query: 353 PHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNG 408
             Y        + ++E I  D II ++ +  + + YY V ++     L      + +  G
Sbjct: 287 TAYDFSIYGGLEGVVEHISADTIIDEKTDK-KEESYYIVKVRTEKNYLGTEKKPLPIIPG 345

Query: 409 FPAEVLFTAKNTTLAQEIIHPI 430
             A V       ++ Q ++ PI
Sbjct: 346 MQATVDILTGQKSVLQYLLKPI 367


>gi|148359050|ref|YP_001250257.1| HlyD family transporter secretion protein [Legionella pneumophila
           str. Corby]
 gi|296107099|ref|YP_003618799.1| HlyD family secretion protein [Legionella pneumophila 2300/99
           Alcoy]
 gi|30577818|emb|CAD90950.1| LssD protein [Legionella pneumophila str. Corby]
 gi|148280823|gb|ABQ54911.1| HlyD family secretion protein [Legionella pneumophila str. Corby]
 gi|295649000|gb|ADG24847.1| HlyD family secretion protein [Legionella pneumophila 2300/99
           Alcoy]
          Length = 378

 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 33/262 (12%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           S+Y +R+   N+   L+  L   QK+L + + L +  +VS+ ++ + ER    S  E++ 
Sbjct: 135 SLYESRMRELNQ---LKKSLELAQKELDLTRPLLKGGSVSEVEVIRLER----SVSEIKG 187

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           NI + K+    +++L ++A  E    ++    D ++  RT                  T+
Sbjct: 188 NIEKFKS--EELDKL-NKARTELFALVEANKADKDRLTRT------------------TV 226

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ G +   ++ +     Q    L++IVP      I AK+ P  I  +  G  A V+ 
Sbjct: 227 RSPVYGIVKQIKTTTIGGVVQPGSDLLEIVPLDDTLLIEAKIRPSDIGFIHPGQKAMVKI 286

Query: 353 PHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNG 408
             Y        + ++E I  D II ++ +  + + YY V ++     L      + +  G
Sbjct: 287 TAYDFSIYGGLEGVVEHISADTIIDEKTDK-KEESYYIVKVRTEKNYLGTEKKPLPIIPG 345

Query: 409 FPAEVLFTAKNTTLAQEIIHPI 430
             A V       ++ Q ++ PI
Sbjct: 346 MQATVDILTGQKSVLQYLLKPI 367


>gi|72383063|ref|YP_292418.1| transporter component [Prochlorococcus marinus str. NATL2A]
 gi|72002913|gb|AAZ58715.1| possible transporter component [Prochlorococcus marinus str.
           NATL2A]
          Length = 377

 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 24/133 (18%)

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLK------EISRDLEQNQRTFADEMSKLTIL 283
           L EN+  +  +L  + +L DE  +    YL+      E+  +++ NQ  F          
Sbjct: 173 LLENLKSKNLILNKLKQLLDEGAVSELQYLEQKISVEELMSEIKANQVQF---------- 222

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               + + I +PI+GT+   +  S    AQ S+P++KIVP + L   + ++  + I ++K
Sbjct: 223 ----KYQEIKAPISGTVFDLKPKSPGFVAQTSEPVLKIVPANNLIA-KVEIDSRSIGYIK 277

Query: 344 KGYTATVR---FP 353
            G  A +    FP
Sbjct: 278 IGKAADISIDTFP 290


>gi|15677583|ref|NP_274740.1| putative secretion protein [Neisseria meningitidis MC58]
 gi|7226993|gb|AAF42082.1| putative secretion protein [Neisseria meningitidis MC58]
 gi|316985749|gb|EFV64694.1| leukotoxin secretion protein D [Neisseria meningitidis H44/76]
 gi|325127197|gb|EGC50140.1| leukotoxin secretion protein D [Neisseria meningitidis N1568]
 gi|325199673|gb|ADY95128.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis H44/76]
 gi|325204694|gb|ADZ00148.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M01-240355]
          Length = 475

 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 75/352 (21%), Positives = 132/352 (37%), Gaps = 62/352 (17%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET- 92
           WS    I+I  ++SG+ ++      I+   + ++K   V +G  + QG  L   E + T 
Sbjct: 72  WSWFGKIDIVAAASGKTVSGGRSKTIQPLETAVVKAVHVRDGQHVKQGETLAELEAVGTD 131

Query: 93  TDLID----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +D++     L+   +  LR                Y+ +  A ESR    +D        
Sbjct: 132 SDVVQSEQALQAAQLSKLR----------------YEAVLAALESRTVPHIDM------- 168

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++  + G+S         L + +       D +     L++ L  HQ +L   K   E+
Sbjct: 169 -AQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQ-----LQSALRGHQAELQSAKAQ-EQ 221

Query: 209 NAVSQNDLNQQERIVYK-----------STLELRE-------NIHEQKNMLRHINELYDE 250
             VS   + QQ+   Y+           + LE +        ++   +  +R I     +
Sbjct: 222 KLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQAAIAQ 281

Query: 251 ANLEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQ-KTILSPIAGTIVYNQS 305
           A        + + RD    L Q      D+    T   K R+Q  TI SP  GT+    +
Sbjct: 282 AEQNRVLNTQNLKRDTLDALRQANEQI-DQYRGQTDKAKQRQQLMTIQSPADGTVQELAT 340

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           ++     Q +Q +M I P      +   V  K I  V++G  A V+   FP+
Sbjct: 341 YTVGGVVQAAQKMMVIAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY 392


>gi|260881701|ref|ZP_05405051.2| secretion protein, HlyD family [Mitsuokella multacida DSM 20544]
 gi|260848204|gb|EEX68211.1| secretion protein, HlyD family [Mitsuokella multacida DSM 20544]
          Length = 363

 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 1/42 (2%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           EI++PF G+I +  +E GS I  GTPL+  +D  T + +D+K
Sbjct: 242 EIRAPFDGVITEKYIEEGSMISNGTPLVAVQD-PTDNWVDIK 282


>gi|255659172|ref|ZP_05404581.1| putative periplasmic component of efflux system [Mitsuokella
           multacida DSM 20544]
 gi|260848623|gb|EEX68630.1| putative periplasmic component of efflux system [Mitsuokella
           multacida DSM 20544]
          Length = 377

 Score = 40.4 bits (93), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 15/138 (10%)

Query: 250 EANLEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN-Q 304
           +A  E  +YL  I  D    LE  Q  +   +S+L   E    + +IL+P+ GT+V   +
Sbjct: 115 QAEYERISYLYSIGADTQKQLEDAQMNYDTAVSELAQAESDASETSILAPMDGTVVGEPK 174

Query: 305 SFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           +  +   A    P  +M+I   S    I+AKV    I ++K G  AT     Y D   K 
Sbjct: 175 TVGTMAVATSDNPTVIMRIADLSS-KQIKAKVDETDIGNIKVGQQATFTVDTYTD---KT 230

Query: 363 FKAIIEKIDPIISQQDNN 380
           F A + K    ISQ D +
Sbjct: 231 FTARVTK----ISQTDTS 244


>gi|299134411|ref|ZP_07027604.1| type I secretion membrane fusion protein, HlyD family [Afipia sp.
           1NLS2]
 gi|298591158|gb|EFI51360.1| type I secretion membrane fusion protein, HlyD family [Afipia sp.
           1NLS2]
          Length = 438

 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 95/453 (20%), Positives = 178/453 (39%), Gaps = 76/453 (16%)

Query: 25  IIGIIGLIT-------WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           I G I LIT       W+ +  I  +V ++G I  + NV +++   +GI+ +  V +G +
Sbjct: 21  IAGAIVLITLTCGFGGWAAITNIAGAVIATGTITVDSNVKKVQHLTAGIVGELHVRDGDE 80

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNL------RCHIDTEKSALDFLNNKYDVLEKAF 131
           +  G  L+  +D  T    +L  V +K+L         +  E+     ++    +L  A 
Sbjct: 81  VKAGQVLIRLDD--TVPRANLA-VIVKSLDELTAREARLTAERDGSHEISFPKRLLSHAQ 137

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRS---------LKMKLTRMRS---IYLNRL 179
            S    L+       +  +++F      ++RS         L+ ++ ++R     Y+ ++
Sbjct: 138 SSEAAHLM-------AGETRLF------IFRSDARQGQKKQLQEQIIQLREQIRGYIGQV 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHE 236
           +   + + L       QK++  +  L++KN V  + L   +R   +   E   L  +I E
Sbjct: 185 EAGKRQNEL------IQKEIEGVGELWKKNLVPLSRLTALQREAARLDGENNRLTASIAE 238

Query: 237 QKNMLRHIN----ELYDEANLEFANYLKEISRDL-EQNQRTFA--DEMSKLTILEKTREQ 289
            +  +  I     ++  +   + A  L+EI   + E ++R  A  DE+ ++ I       
Sbjct: 239 SRGKISEIELKIIQIDQDLRSDVARELREIQGKIAELDERRIAAEDELKRIDIR------ 292

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
               +P  G I      +        + ++ +VP         KV P+ I +V  G    
Sbjct: 293 ----APQDGIIHELSVHTIGGVVSPGEQILLVVPDHDALMAETKVAPRDINNVSVGQRVV 348

Query: 350 VRFPHYADIR---EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI-TDLAFSDNNIEL 405
           +RFP + DIR   E      I   D    Q+ +      YY V ++I +D        +L
Sbjct: 349 LRFPAF-DIRTTPEINGTVTIVSADATQDQKSD----ASYYRVRIQIPSDEIRRLGKNKL 403

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             G P E        T     + P+ D   K F
Sbjct: 404 VPGMPVESFIETTPRTALSYFVKPLRDQITKAF 436


>gi|157373593|ref|YP_001472193.1| secretion protein HlyD family protein [Shewanella sediminis
           HAW-EB3]
 gi|157315967|gb|ABV35065.1| secretion protein HlyD family protein [Shewanella sediminis
           HAW-EB3]
          Length = 352

 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 68/180 (37%), Gaps = 26/180 (14%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++ L   K L EKN  SQ+D++Q +     S   L                  DEAN   
Sbjct: 129 EQQLRRSKKLKEKNYSSQDDVDQMQASFESSVAHL------------------DEANAAL 170

Query: 256 ANYLKEIS---RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
               +E++     L Q         + L + +       + +P +G I    +     Y 
Sbjct: 171 VAKQRELAVFNAQLLQADANVVKAKAGLELAKIQLADTQVRAPFSGVIGKRGAL-KGQYV 229

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           Q  Q L  +VP   + +I A     QIQH++ G +  V    + D   K F  +I+ + P
Sbjct: 230 QPGQALYSLVPDGAV-WITANFKETQIQHMQPGQSVQVNLDAFPD---KTFTGVIDSLSP 285


>gi|169632877|ref|YP_001706613.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter baumannii SDF]
 gi|169633843|ref|YP_001707579.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter baumannii SDF]
 gi|169151669|emb|CAP00459.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           (superfamily ABC, membrane) [Acinetobacter baumannii]
 gi|169152635|emb|CAP01630.2| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           (superfamily ABC, membrane) [Acinetobacter baumannii]
          Length = 398

 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 81/396 (20%), Positives = 150/396 (37%), Gaps = 74/396 (18%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLIT---WSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           N+  + P  L R +L+  I  IGL+    W+ +  +E   + +G+++       I+S   
Sbjct: 15  NVSYSEP-PLPRASLVIWIVGIGLVIFFIWAWVFKLEEVSTGTGKVIPSSKEQVIQSLEG 73

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ K  V+ G  + +G  L                         +D  + A +   +K 
Sbjct: 74  GILTKLNVQEGDIVQKGQVL-----------------------AQLDPTRFASNVGESK- 109

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRM----RSIYLNR 178
                            L    +T +++     G   V+  + MK  ++     ++Y +R
Sbjct: 110 ---------------SLLISAQATAARLRAEVNGTPLVFPEIVMKEPKLVQEETALYTSR 154

Query: 179 -LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             +LE   +  R  L   Q++L M + L  K A S+ ++           L LR   ++ 
Sbjct: 155 RANLEETLAGFRQALQLVQQELAMTEPLVAKGAASEVEV-----------LRLRREANDL 203

Query: 238 KNMLRHI-NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +N +    N+ Y +A  E    L + + D E  Q+        L       ++    +P+
Sbjct: 204 QNKMNDAQNQYYVKAREE----LSKANTDSETQQQIVLGRSDSL-------DRAVFRAPV 252

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +      +      Q+  LM IVP  +   I A++ P+ I  ++ G  A V+   Y 
Sbjct: 253 RGVVKEIAVTTRGGVVPQNGKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKITAYD 312

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
                  K  +  I P  + +D   Q Q YY V ++
Sbjct: 313 YSIYGGLKGKVTVISP-DTIRDEVKQDQFYYRVYIR 347


>gi|134291486|ref|YP_001115255.1| HlyD family type I secretion membrane fusion protein [Burkholderia
           vietnamiensis G4]
 gi|134134675|gb|ABO59000.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           vietnamiensis G4]
          Length = 472

 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 69/331 (20%), Positives = 133/331 (40%), Gaps = 37/331 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++I   + G+++ +  V  I+   +G++++  V +G ++  G  L+  +  +     D  
Sbjct: 80  LDIVAVAPGKLIPKQQVKTIQPALTGVVRRILVRDGQRVQAGDLLMELDTTQAAADADKA 139

Query: 100 KVS-------IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           + S        +  R  +  + +       K D    A +   + L D  G Y     K+
Sbjct: 140 RQSRLDAALMAERSRALLQAQSAGASPTLTKIDDASDAQQLEAQHLAD--GIYFEYRDKL 197

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            +     + R  ++  TR +        LE  + L R   + +   L   K +   + + 
Sbjct: 198 HSAQAELLKRDAELGTTRQQIA-----KLEATAPLARRQANDY-ASLVADKYVARTDYLD 251

Query: 213 --QNDLNQQERIVYKST--LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             Q  LNQ+  +  + +   EL   I +Q+  +  +   Y    L   + L + ++ L Q
Sbjct: 252 KEQTALNQEHELAAQRSHAQELAAAIVQQRAEVAALTSEYRRQQL---DALDKANQQLAQ 308

Query: 269 --NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
             N  T AD   KL          ++ +P+AGT+   +  +    A  + P+M+IVP   
Sbjct: 309 SRNDETKADTRQKLL---------SLTAPVAGTVQQLKIHTLGGVATAASPVMEIVPDDM 359

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           L  + A +  K I  VK G  A V+   FP+
Sbjct: 360 LE-VEADIENKDIGFVKVGQPAVVKIEAFPY 389


>gi|308389855|gb|ADO32175.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis alpha710]
 gi|325130786|gb|EGC53521.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis OX99.30304]
 gi|325135677|gb|EGC58291.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M0579]
 gi|325201612|gb|ADY97066.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M01-240149]
 gi|325208652|gb|ADZ04104.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis NZ-05/33]
          Length = 475

 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 75/356 (21%), Positives = 133/356 (37%), Gaps = 70/356 (19%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET- 92
           WS    I+I  ++SG+ ++      I+   + ++K   V +G  + QG  L   E + T 
Sbjct: 72  WSWFGKIDIVAAASGKTVSGGRSKTIQPLETAVVKAVHVRDGQHVKQGETLAELEAVGTD 131

Query: 93  TDLID----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +D++     L+   +  LR                Y+ +  A ESR    +D        
Sbjct: 132 SDVVQSEQALQAAQLSKLR----------------YEAVLAALESRTVPHIDM------- 168

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYL----NRLDLENKSSLLRALLSSHQKDLTMMKN 204
                     +  RSL +    ++S+ +           + + L++ L  HQ +L   K 
Sbjct: 169 ----------AQARSLGLSDADVQSVQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKA 218

Query: 205 LFEKNAVSQNDLNQQERIVYK-----------STLELRE-------NIHEQKNMLRHINE 246
             E+  VS   + QQ+   Y+           + LE +        ++   +  +R I  
Sbjct: 219 Q-EQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQA 277

Query: 247 LYDEANLEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQ-KTILSPIAGTIV 301
              +A        + + RD    L Q      D+    T   K R+Q  TI SP  GT+ 
Sbjct: 278 AIAQAEQNRVLNTQNLKRDTLDALRQANEQI-DQYRGQTDKAKQRQQLMTIQSPADGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
              +++     Q +Q +M I P      +   V  K I  V++G  A V+   FP+
Sbjct: 337 ELATYTVGGVVQAAQKMMVIAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY 392


>gi|83311477|ref|YP_421741.1| membrane-fusion protein [Magnetospirillum magneticum AMB-1]
 gi|82946318|dbj|BAE51182.1| Membrane-fusion protein [Magnetospirillum magneticum AMB-1]
          Length = 468

 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 77/375 (20%), Positives = 144/375 (38%), Gaps = 36/375 (9%)

Query: 9   LKRNHPASLKRMT-LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L+ +  + L R T LL+       + W+    +    ++ G+I+    V  ++    GI+
Sbjct: 47  LEESGTSGLIRFTMLLASTTTAAFVVWASFTDVPEIATAEGQIIPTGQVQAVQHLEGGIV 106

Query: 68  KKFQVENGSQILQGTPLL------TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           +     +G  +  G P++         D+E T   +   + IK  R     E+   DF N
Sbjct: 107 QDILARDGDLVEAGAPIVRLNAAQAISDLEQTRARE-ATLLIKAERLRALAEERQPDFSN 165

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
               YD L          + D +  ++S  S+  +   S +   ++ K + +R       
Sbjct: 166 MPKGYDRL----------MSDNMAIFNSQ-SQARDTSRSVILSQMEQKRSDLRL------ 208

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            LE++   LR  L   Q+++TM + L  K  VS+      +R + +   EL   I ++  
Sbjct: 209 -LESQERSLREQLGPLQEEMTMRQELVAKGLVSRVVFLDTKRELSRVQGELARLIGQEVT 267

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               ++E+ +      ++  K    DL       A     +  LE    +  I++P+ G 
Sbjct: 268 AREALSEVENRLMDNKSSLQKSTMDDLGTTINELAQVQESIGRLEDRVARLEIIAPVRGL 327

Query: 300 I----VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           +    V NQ        Q    + ++VP      + AK+  K + H+K G    V+   Y
Sbjct: 328 VKGLTVKNQ----GAVIQAGGNVCEVVPVETQMKVDAKINTKDVGHLKIGQPVRVKVTTY 383

Query: 356 ADIREKKFKAIIEKI 370
              R       + KI
Sbjct: 384 DFARYGAVDGTLTKI 398


>gi|186685134|ref|YP_001868330.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186467586|gb|ACC83387.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
          Length = 479

 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 47/218 (21%), Positives = 97/218 (44%), Gaps = 20/218 (9%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A L   T+  ++ + GL  WS+   I ++V+  G ++   +VVE ++P SG +   +V+ 
Sbjct: 34  AWLTLSTMSFVVAVAGL--WSVFGRIPLTVTGQGILIKPHHVVEFQAPSSGPLLTLKVKA 91

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  I QG  L   +       +  ++V ++ L+             N + D L+K     
Sbjct: 92  GDIIKQGDVLGIIDQSALKQQLQQEQVKLQQLQTQ-----------NQETDRLQKLL--- 137

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            +Q +  LG+            +     + K++    R+I   R  + ++   +  LL +
Sbjct: 138 IDQQIITLGQQRMD----LENNLRREQGAPKLRDQTQRAIAQKRQSINSRKQQINYLLKT 193

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +  +   ++LFE++ +SQ+ L Q E+  + +  EL +
Sbjct: 194 LKGRVDNRRHLFEQHVISQDMLVQAEQEYFNTQSELSD 231


>gi|218437416|ref|YP_002375745.1| secretion protein HlyD [Cyanothece sp. PCC 7424]
 gi|218170144|gb|ACK68877.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7424]
          Length = 504

 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 89/448 (19%), Positives = 182/448 (40%), Gaps = 53/448 (11%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           +I I   + W++   I+ +  + G++  +   + + +P SG +   +V+ G ++  G  L
Sbjct: 56  VIFITIALPWAMFSKIDETGKAQGQLEPKGKTIRLDAPVSGTVATIKVKEGEKVKVGQTL 115

Query: 85  LTFE-DIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDV-------------LEK 129
           +  E D+   DL +   K+  +  R H       LD L N+  +             LEK
Sbjct: 116 VELESDLVNADLQLQKNKLEGQENRLH------QLDILKNQLQIVLQTQTQQNQAQKLEK 169

Query: 130 -AFESREEQLLDFL-GKYHSTC----------------SKVFNYGISSVYRSLKMKLTRM 171
            A  ++ +Q L+ L   YH                   S+V N+      ++ + +  R 
Sbjct: 170 LAQVNQAKQELEVLQNTYHLQQQEKLAQVNQAKQDLQHSQVDNHLAGIGLKTAEHEAQRY 229

Query: 172 RSIY----LNRLDLENKSSLLRALLSSHQK---DLTMMK-NLFEKNAVSQNDLNQQERIV 223
           R       ++++ +  K  +++     +++   D+   K  L E+ ++ +  + Q +  +
Sbjct: 230 REAAEEGIVSQIQIVEKEDVIQERTRVYEQTKSDIEQAKLRLSEQQSIYERTIKQTKSDI 289

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            KS L L+E    Q+N    + +  + A L+    LK +  D+   +       S++  L
Sbjct: 290 EKSKLRLKE----QENSYNSLIQSGEIAILKVKEQLKNVETDVTSLKSEIKQTKSQIQSL 345

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E    Q+ I SP+ GTI         +  Q    +++I P      +RA++  ++   ++
Sbjct: 346 EFQLSQRVIKSPVEGTIFDLAVEREKSVLQSGNKIIEIAPQGTKLVLRAEMATQESGFLE 405

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQ-QDNNLQTQEY-YEVILKITDLAFSDN 401
           KG    ++F  Y        +  + ++ P   + + ++ +T  Y  E+ L  T +  S  
Sbjct: 406 KGMLVKMKFDAYPFQDYGIIEGKLSQVSPTTKKIETSDGETSAYELEIELDQTCIPSSKE 465

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEIIHP 429
            I LR G  A      +   L   I+ P
Sbjct: 466 CIPLRPGDTATAEVVVRQRRLIDFILDP 493


>gi|54297429|ref|YP_123798.1| secretion system protein D [Legionella pneumophila str. Paris]
 gi|53751214|emb|CAH12625.1| Legionella secretion system protein D [Legionella pneumophila str.
           Paris]
          Length = 378

 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 33/262 (12%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           S+Y +R+   N+   L+  L   QK+L + + L +  +VS+ ++ + ER    S  E++ 
Sbjct: 135 SLYESRMRELNQ---LKKSLELAQKELDLTRPLLKGGSVSEVEVIRLER----SVSEIKG 187

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           NI + K+    +++L ++A  E    ++    D ++  RT                  T+
Sbjct: 188 NIEKFKS--EELDKL-NKARTELFALVEANKADKDRLTRT------------------TV 226

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ G +   ++ +     Q    L++IVP      I AK+ P  I  +  G  A V+ 
Sbjct: 227 RSPVYGIVKQIKTTTIGGVVQPGSDLLEIVPLDDTLLIEAKIRPSDIGFIHPGQKAMVKI 286

Query: 353 PHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNG 408
             Y        + ++E I  D II ++ +  + + YY V ++     L      + +  G
Sbjct: 287 TAYDFSIYGGLEGVVEHISADTIIDEKTDK-KEESYYIVKVRTEKNYLGTEKKPLPIIPG 345

Query: 409 FPAEVLFTAKNTTLAQEIIHPI 430
             A V       ++ Q ++ PI
Sbjct: 346 MQATVDILTGQKSVLQYLLKPI 367


>gi|265764268|ref|ZP_06092836.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263256876|gb|EEZ28222.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 298

 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 39/197 (19%), Positives = 83/197 (42%), Gaps = 28/197 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R D+  + +  R  +++ +++   ++NL +  A +Q  L+  E  +     +L
Sbjct: 83  MKSVESQRPDVNKQIAATRQQIATARREKRRVENLLKAGAANQKQLDDWEAQIALLERQL 142

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +   +N    + E      ++ A                  D+++K           
Sbjct: 143 TAQMSSLQNSTNSLTEQGSSVAIQVAQ---------------VEDQLAKC---------- 177

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            ++SPI+GT++   +      A   +PL K+    ++ Y+RA +T +Q+  VK G   TV
Sbjct: 178 HVVSPISGTVLAKYA-EVGELAAVGKPLFKVADIDQM-YLRAYITSEQLSQVKLGNRVTV 235

Query: 351 RFPHYADIREKKFKAII 367
            F  Y     K++  ++
Sbjct: 236 -FSDYGGDERKEYPGVV 251


>gi|296101405|ref|YP_003611551.1| type I secretion membrane fusion protein, HlyD family [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295055864|gb|ADF60602.1| type I secretion membrane fusion protein, HlyD family [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 450

 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 8/147 (5%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           T+++P+ GT+   +  +     QQ   +M ++P      + AK+ P  +  +  G  ATV
Sbjct: 295 TVVAPVRGTVNNIRVTTRGGVIQQGAEIMTLIPLEDNLLVEAKIKPSDVAFIHPGLPATV 354

Query: 351 RFPHYADIREKKFKAIIEKI--DPIISQQD--NNLQTQEYYEVILKITD---LAFSDNNI 403
           +   Y          ++E +  D +I ++          YY V ++ TD   L   D + 
Sbjct: 355 KITAYDYAIYGGLNGVVEHLSSDTLIDEEKARQGRGDSTYYRVFVR-TDRAALQVKDKSF 413

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +  G  A V       T+   I+ PI
Sbjct: 414 PIMPGMVANVEIRTGEKTILSYILKPI 440


>gi|325124661|gb|ADY84184.1| putative protein secretion efflux system, membrane fusion protein
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 398

 Score = 40.4 bits (93), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 84/396 (21%), Positives = 152/396 (38%), Gaps = 74/396 (18%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLIT---WSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           N+  + P  L R +L+  I  IGL+    W+ +  +E   + +G+++       I+S   
Sbjct: 15  NVSYSEP-PLPRASLVIWIVGIGLVIFFIWAWVFKLEEVSTGTGKVIPSSKEQVIQSLEG 73

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ K  V+ G  + +G  L                         +D  +    F +N  
Sbjct: 74  GILTKLNVQEGDIVQKGEIL-----------------------AQLDPTR----FASN-- 104

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRM----RSIYLNR 178
                  ESR       L    +T +++     G   V+  + MK  ++     ++Y +R
Sbjct: 105 -----VGESR-----SLLISAQATAARLRAEVNGTPLVFPEIVMKEPKLVQEETALYTSR 154

Query: 179 -LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             +LE   +  R  L   Q++L M + L  K A S+ ++           L LR   ++ 
Sbjct: 155 RANLEETLAGFRQALQLVQQELAMTEPLVAKGAASEVEV-----------LRLRREANDL 203

Query: 238 KNMLRHI-NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +N +    N+ Y +A  E    L + + D E  Q+        L       ++    +P+
Sbjct: 204 QNKMNDAQNQYYVKAREE----LSKANTDSETQQQIVLGRSDSL-------DRAVFRAPV 252

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +      +      Q+  LM IVP  +   I A++ P+ I  ++ G  A V+   Y 
Sbjct: 253 RGVVKEIAVTTHGGVIPQNGKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKITAYD 312

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
                  K  +  I P  + +D   Q Q YY V ++
Sbjct: 313 YSIYGGLKGKVTVISP-DTIRDEVKQDQFYYRVYIR 347


>gi|229825050|ref|ZP_04451119.1| hypothetical protein GCWU000182_00400 [Abiotrophia defectiva ATCC
           49176]
 gi|229790797|gb|EEP26911.1| hypothetical protein GCWU000182_00400 [Abiotrophia defectiva ATCC
           49176]
          Length = 507

 Score = 40.4 bits (93), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 99/459 (21%), Positives = 178/459 (38%), Gaps = 73/459 (15%)

Query: 14  PASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           PA L R  +  +  I+G  I W+ +  ++      G+++    V  I+    GII    V
Sbjct: 27  PAPLGRAVIWIVFLIVGAAILWAYIGKVDEVAVGRGKVVPAGRVKVIQPAMEGIITAIHV 86

Query: 73  ENGSQILQGTPLLTFE-DIETTDL------IDLKKVSI---KNLRCHIDTEKSAL--DFL 120
             G  + +G  L+  +  ++ TD+      ID  K+ I   K +    D  K+ L  D  
Sbjct: 87  TEGQPVKKGQLLIELDRTMKETDVEGLQKSIDTAKLEIELLKKVSSERDLGKAVLSSDLE 146

Query: 121 NN-KYDVLE------KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +  K D+LE        + +R+E L   + +      K+  Y +  +   L +   +  S
Sbjct: 147 DEIKNDLLEFVQAKESEYTTRQESLKLAVDQSEEQL-KIAEYDLKKLENKLIISNEKAES 205

Query: 174 I----------YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-------- 215
           +            N + +E    +L+ L   +       K L+E  + ++N+        
Sbjct: 206 LENIVKTGGVEAANLVKMEESIKILKELDKKY-------KRLYESGSAAKNEWLAKHNEL 258

Query: 216 -LNQQE-------RIVYKSTLELREN------------IHEQKNMLRHINELYDEA---- 251
            L Q+E           K TLE  +N            I  QK  +R       E     
Sbjct: 259 TLAQKEYEAQKIRAAREKVTLETEQNNANDEVSLAEKEIQIQKIRVRQAESRLKETKNSI 318

Query: 252 -NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            +LE       +S  +E+N R  ++  S L  + K  E +++ +P  GT+    S +   
Sbjct: 319 NSLEKERSTSTLSLIVEKN-RQISELESSLEKIRKGMEFQSLYAPEDGTVQGMASNTIGG 377

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
               +QP+M IVP+     + A +  K +  V+ G  A+V+   +   +    K  IE I
Sbjct: 378 VVTPAQPVMSIVPNDTPLIVEASLLNKDVGFVEVGQEASVKIDTFPFQKYGTVKGKIESI 437

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            P  + +D  L T    +V L+   +  +  N+ +  G 
Sbjct: 438 SP-DAFEDEKLGTVYKMKVSLEKQSMMVNGKNVHIVPGM 475


>gi|332297703|ref|YP_004439625.1| secretion protein HlyD family protein [Treponema brennaborense DSM
           12168]
 gi|332180806|gb|AEE16494.1| secretion protein HlyD family protein [Treponema brennaborense DSM
           12168]
          Length = 383

 Score = 40.4 bits (93), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 1/116 (0%)

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +L+EI+ ++   + T      +L  +E +     ++SP+AG I    S ++ ++    Q 
Sbjct: 206 FLEEITAEISNMELTETQLKQQLEQIEISLRNTILVSPMAGFIQEISSLNAGDFIFADQK 265

Query: 318 LMKIVPHSKLTY-IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           ++ I+P+S   + I  ++  K    ++K     +RFP +     K  +  I+ IDP
Sbjct: 266 ILNIIPNSNSDFRIELRIPAKDAGKLRKNMKVKLRFPAFPYYEFKGAEGTIQTIDP 321


>gi|206575592|ref|YP_002235798.1| microcin E492 secretion protein MceH [Klebsiella pneumoniae 342]
 gi|206570436|gb|ACI12082.1| microcin E492 secretion protein MceH [Klebsiella pneumoniae 342]
          Length = 425

 Score = 40.4 bits (93), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 128/307 (41%), Gaps = 42/307 (13%)

Query: 155 YGISSVYRSLK-------MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL-- 205
           +GI  + R+L+         +   RS Y    D+   SS++R      QK    M+N   
Sbjct: 120 HGIDEIIRNLEKGRDETLQSIKDQRSKYKEAYDI--SSSIVRTAEQGLQKMENNMRNYEQ 177

Query: 206 FEKNAVSQND-LNQQERIVYK---STLELR-ENIHEQKNMLRHINELYDEANLEFANYLK 260
           + KN +  ND L  Q  + Y+   S L ++ +NI   +N L+ I  L  E  ++ + Y  
Sbjct: 178 YRKNGLINNDQLTNQMSLYYQQENSVLSIKNQNI---QNALQ-IKNLEREVQIQTSEYDS 233

Query: 261 EISR-DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            I +  L++N      E+ K  I         I SP  G I+   + S          L 
Sbjct: 234 RIYQMKLQRN------ELKKELIKSGLNSSIIIRSPSDG-IIDTLNVSQGQIVNAGDTLS 286

Query: 320 KIVPH-SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ- 377
           +I+P   +  Y+   +    I ++KKG    +R+  +A  +  +F  II+ I    S Q 
Sbjct: 287 QIIPEEDRKLYLILWIPDMAIPYIKKGDHVRIRYDAFAYEKFGQFNGIIQSISKSPSSQQ 346

Query: 378 --------DNN--LQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
                   DN   L    YY V++   +  + ++   I L NG  AE+    +N  + Q 
Sbjct: 347 EMLSYHLLDNIKLLSGHAYYRVMVTPENDRIFYNKEEIHLENGMRAEITLFLENRKIYQW 406

Query: 426 IIHPITD 432
           +I P+ D
Sbjct: 407 MISPLYD 413


>gi|226951447|ref|ZP_03821911.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter sp. ATCC 27244]
 gi|294650969|ref|ZP_06728310.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter haemolyticus ATCC 19194]
 gi|226837814|gb|EEH70197.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter sp. ATCC 27244]
 gi|292823150|gb|EFF82012.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter haemolyticus ATCC 19194]
          Length = 396

 Score = 40.4 bits (93), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 76/375 (20%), Positives = 143/375 (38%), Gaps = 70/375 (18%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           IG++ L+ W+ +  +E   + +G+++       I+S   GI+ K  V+ G  +  G  L 
Sbjct: 33  IGLVVLLVWAWVFSLEEVSTGTGKVIPSSKEQIIQSLEGGILTKLDVKEGDIVESGQILA 92

Query: 86  TFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             +         E+  L+     +   LR  ++   +AL F     +VL++    +EE  
Sbjct: 93  QLDPTRFASNVGESQSLLMSAMATAARLRAEVN--GTALTFPE---EVLKEPKLVKEETA 147

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           L     Y+S                              R +LE   +  +  L   Q++
Sbjct: 148 L-----YYS-----------------------------RRANLEESIAGNQQALRLVQQE 173

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFAN 257
           L M + L  K A S+ ++           L LR   ++ +N +  I N+ Y +A  E   
Sbjct: 174 LAMTEPLVAKGAASEVEV-----------LRLRREANDLQNRINDIRNQYYVKAREE--- 219

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L + + D++  Q+        L       ++    +P+ G +      +      Q+  
Sbjct: 220 -LSKANTDIQTQQQVVKGRTDSL-------QRAVFRAPVRGIVKEIDVTTLGGVVPQNGK 271

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP      I A+++P+ I  ++    A V+   Y        +  +  I P  + +
Sbjct: 272 LMTIVPLEDKLLIEARISPRDIAFIRPNQEALVKITAYDYAIYGGLEGKVTVISP-DTIR 330

Query: 378 DNNLQTQEYYEVILK 392
           D   Q Q YY V ++
Sbjct: 331 DEVKQDQFYYRVYIR 345


>gi|91786920|ref|YP_547872.1| Type I secretion membrane fusion protein HlyD [Polaromonas sp.
           JS666]
 gi|91696145|gb|ABE42974.1| Type I secretion membrane fusion protein, HlyD [Polaromonas sp.
           JS666]
          Length = 444

 Score = 40.4 bits (93), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%)

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +LT   + R+ +T+ SPI G +      +      Q+Q LM IVPH     + A++  + 
Sbjct: 281 ELTKATQRRDLQTLRSPIDGVVQQLAVTTVGGVVTQAQALMTIVPHHAALEVDAQINNRD 340

Query: 339 IQHVKKG 345
           I HVK G
Sbjct: 341 IGHVKVG 347


>gi|254513024|ref|ZP_05125090.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
 gi|221533023|gb|EEE36018.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
          Length = 465

 Score = 40.4 bits (93), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 86/424 (20%), Positives = 170/424 (40%), Gaps = 56/424 (13%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           P+ L R T  +I G+  LI   W+ L  +++  ++ G++   ++V  I+    G++++  
Sbjct: 46  PSPLGRATAWAI-GLFMLIALVWASLGRVDVVATAQGKLAPREHVKLIQPVDYGVVREIL 104

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V +G  +  G  L+  +   ++                 D E++  + +  + D      
Sbjct: 105 VNDGQSVKAGDVLVALDPTASS----------------ADEEQARHELMVARID------ 142

Query: 132 ESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSL---KMKLTRMRSIYLNRLDLENKSS 186
           ++R E LL +L  G+         +   S + R L    +   + +   L +  LE ++ 
Sbjct: 143 QARGEALLRYLDSGEIELELPDGISASTSLMQRQLIDAHLGAYKAQEATLKQQRLEAEAD 202

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ------------QERIV-YKSTLEL-RE 232
           L   ++      LT    L E+   ++ +L++            QER V  +  LE+ RE
Sbjct: 203 L--GVVLQEIAKLTDTLPLIEEQLAARKELSEKGLSPRFVYLELQERFVSARQNLEIQRE 260

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            I + +  +  I+   D+   EF    ++I  +L  ++         L    + R+ + +
Sbjct: 261 QIDKMQAAIAAIDRQVDQLRSEFR---EQIVVELTTSEDKVDMLSEGLRKASQRRQLQQL 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ G +      +     Q +Q LM +VP      + AK+  + I  V+ G    V+ 
Sbjct: 318 KSPVDGVVQQLAIHTVGGVVQPAQALMVVVPGDGELVLDAKLLNRDIGFVETGDPVEVKL 377

Query: 353 PHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITD-LAFSDNNIELRNGF 409
             +          ++E I  D I   QD N Q   Y   +  + D ++  D  + L +G 
Sbjct: 378 EAFPFTTYGVLNGVLEDISTDAI---QDEN-QGLVYQARVRLLEDRISVGDKEVNLTSGM 433

Query: 410 PAEV 413
            A V
Sbjct: 434 AATV 437


>gi|121635371|ref|YP_975616.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis FAM18]
 gi|254805486|ref|YP_003083707.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis alpha14]
 gi|6900445|emb|CAB72043.1| HlyD protein [Neisseria meningitidis]
 gi|120867077|emb|CAM10843.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis FAM18]
 gi|157418812|gb|ABV55109.1| secretion protein [Neisseria meningitidis]
 gi|254669028|emb|CBA07459.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis alpha14]
 gi|325131723|gb|EGC54425.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M6190]
 gi|325138857|gb|EGC61408.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis ES14902]
 gi|325142891|gb|EGC65254.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis 961-5945]
 gi|325198829|gb|ADY94285.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis G2136]
          Length = 475

 Score = 40.4 bits (93), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 132/352 (37%), Gaps = 62/352 (17%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET- 92
           WS    I+I  ++SG+ ++      I+   + ++K   V +G  + QG  L   E + T 
Sbjct: 72  WSWFGKIDIVAAASGKTVSGGRSKTIQPLETAVVKAVHVRDGQHVKQGETLAELEAVGTD 131

Query: 93  TDLID----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +D++     L+   +  LR                Y+ +  A ESR    +D        
Sbjct: 132 SDVVQSEQALQAAQLSKLR----------------YEAVLAALESRTVPHIDM------- 168

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++  + G+S         L + +       D +     L++ L  HQ +L   K   E+
Sbjct: 169 -AQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQ-----LQSALRGHQAELQSAKAQ-EQ 221

Query: 209 NAVSQNDLNQQERIVYK-----------STLELRE-------NIHEQKNMLRHINELYDE 250
             VS   + QQ+   Y+           + LE +        ++   +  +R I     +
Sbjct: 222 KLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQAAIAQ 281

Query: 251 ANLEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQ-KTILSPIAGTIVYNQS 305
           A        + + RD    L Q      D+    T   K R+Q  TI SP  GT+    +
Sbjct: 282 AEQSRVLNTQNLKRDTLDALRQANEQI-DQYRGQTDKAKQRQQLMTIQSPADGTVQELAT 340

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           ++     Q +Q +M + P      +   V  K I  V++G  A V+   FP+
Sbjct: 341 YTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY 392


>gi|189500593|ref|YP_001960063.1| type I secretion membrane fusion protein, HlyD family [Chlorobium
           phaeobacteroides BS1]
 gi|189496034|gb|ACE04582.1| type I secretion membrane fusion protein, HlyD family [Chlorobium
           phaeobacteroides BS1]
          Length = 472

 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 158/401 (39%), Gaps = 50/401 (12%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL- 106
           G+I+    +  I+S   G+++K  V+ G  +  G  L+  +    T  +  ++  + +L 
Sbjct: 93  GKIIPSSRLQVIESLDGGVVEKILVQEGVVVKSGDLLMRIDPTRYTSSLQERQYEVLSLI 152

Query: 107 ----RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
               R     E S LD   +K   + +  E  E+ L      Y  +       G  S   
Sbjct: 153 ARASRLRALAEDSPLDLPEDKLKDVPQIVE-HEKHL------YEESLK-----GFDSQMI 200

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            +K KL++ R   L   ++E +    R       ++L   + L +  AVS+ ++ +  R 
Sbjct: 201 IMKEKLSQ-REHELE--EVEARQIQARQAYGLAAQELNRTQPLLKSGAVSEVEVIRLRRD 257

Query: 223 VYKSTLELRENIHEQKNMLRHINELYD-----------EANLEFANYLKEISRDLEQNQR 271
           V  +  E    I  +  + R + E  +           E   E A+ L +IS  + Q  +
Sbjct: 258 VANAKGERDAAIARKATLERSVEEAREQIQETELNTRNEWREELADVLSKIS-SMSQGAK 316

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             AD +          E+  I +P+ GT+      +     +    +  IVP      + 
Sbjct: 317 GLADRV----------ERAEIKAPVNGTVQRLYINTLGGVVKPGGRVADIVPLDDSLEVE 366

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVI 390
            KV+PK I  V  G  A V+   Y        KA + +I P  ++ ++ N     +Y V 
Sbjct: 367 VKVSPKDIAFVHPGQKALVKLTAYEFSIYGGLKADVYQISPDTVTDEEGNT----FYLVR 422

Query: 391 LKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLAQEIIHPI 430
           +K T  A     + +  G  A+V + T K T LA  ++ PI
Sbjct: 423 VK-TPAASIREGLPIIPGMMAQVDILTGKRTVLAY-LLKPI 461


>gi|32455993|ref|NP_861995.1| rb120 [Ruegeria sp. PR1b]
 gi|22726345|gb|AAN05141.1| RB120 [Ruegeria sp. PR1b]
          Length = 535

 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 91/433 (21%), Positives = 175/433 (40%), Gaps = 69/433 (15%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           +W++L  I  +V +SG I  E N   ++    G + +  V  G ++  G           
Sbjct: 128 SWAMLHSISGAVVASGRIEVEHNRQVVQHIDGGTVDEILVAEGDRVTAG----------- 176

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF-LGKYHSTCSK 151
            DL  L ++    LR  +   +  L  L  +   LE   +  EE   D  L    +T   
Sbjct: 177 -DL--LIRLDSSALRSELVITEGQLFELMARRGRLEAERDGAEEITFDPELKTTAATRPD 233

Query: 152 VFNY--GISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFE- 207
           V     G  + + + +    + R     R+  +E + S L+A  +S ++ L ++ +  E 
Sbjct: 234 VAELMQGQVNQFEAARSAEAKQREQLHKRISQIEQQISGLQAQQASARRQLELISSEVES 293

Query: 208 KNAVSQNDLNQQERIV----YKSTLELR--ENIHEQKNMLRHINELYDEA-NLEFANYLK 260
           +  + +  L Q  +++     K++LE R  E +  +      I EL  +  NL+ A   +
Sbjct: 294 QQGLLEKGLTQAAQVLNLRRTKASLEGRLGELVANEAQSRGRITELEIQILNLDSARREE 353

Query: 261 EISR---------DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            I+R         ++ + +R   D +S+L I+          +P++G +VY  +  +   
Sbjct: 354 AITRMRDLRYQELEMAETRRNLKDRLSRLDIV----------APVSG-VVYGLTVQTPRA 402

Query: 312 A-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             + ++PL+ +VP  +   I AKV    I  +  G   ++R P           A+ ++ 
Sbjct: 403 VIRPAEPLLYLVPQDRPLIIAAKVHTTDIDQIFIGQPVSLRLP-----------ALDQRS 451

Query: 371 DPIISQQ---------DNNLQTQEYY--EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            P +S Q          +    + +Y  E+ L   ++A    +I L  G P E     ++
Sbjct: 452 TPELSGQVVLISADAFRDETTGEPFYRVEIALDPEEVARLPEDILLIPGMPVESYIRTQD 511

Query: 420 TTLAQEIIHPITD 432
            T    ++ P TD
Sbjct: 512 HTPMAYLLKPFTD 524


>gi|222053472|ref|YP_002535834.1| type I secretion membrane fusion protein, HlyD family [Geobacter
           sp. FRC-32]
 gi|221562761|gb|ACM18733.1| type I secretion membrane fusion protein, HlyD family [Geobacter
           sp. FRC-32]
          Length = 391

 Score = 40.4 bits (93), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 65/343 (18%), Positives = 127/343 (37%), Gaps = 76/343 (22%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           II +   + WS    I+ S   +G ++    V  I++   G++K  +V  G  + QG  L
Sbjct: 24  IIALAVTVFWSSHYRIDQSARGAGTVIATSRVQVIQAVDGGVLKSLKVREGDSVKQGQVL 83

Query: 85  LTFEDIETTDLI---DLKKVSIKN----LRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
              +       +   D +  ++      LR  + T  S + F  N           R  +
Sbjct: 84  AVLDQTRFAAQVMELDSRLAALHGQAARLRAEV-TGASEIRFPTNL---------GRFPE 133

Query: 138 LLD-----FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           LLD     F  K  S   ++   G++       ++L R                      
Sbjct: 134 LLDVQKALFTQKRQSLDEELRTLGVA-------VRLAR---------------------- 164

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
               +D  ++  L +   VS++++ + ER +  +          +  ++   N+ Y +A 
Sbjct: 165 ----EDARLVAELAKTGDVSRSEVIKAERALNDA----------EAQLINRKNKYYQDAR 210

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            E A    +   D+ QN++       +L           + SP++G +   +  +     
Sbjct: 211 AELA----KTEDDIGQNEQVRTPRAQQLA-------DSVMRSPVSGIVKNVRVTTQGGVL 259

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           +  + L++IVP   +  + AK+ P  I  VK    AT+RF  +
Sbjct: 260 RAGEELLQIVPLDDVLIVEAKIRPSDIALVKPDLKATIRFDAF 302


>gi|192361457|ref|YP_001981883.1| HlyD family secretion protein [Cellvibrio japonicus Ueda107]
 gi|190687622|gb|ACE85300.1| HlyD-family secretion protein [Cellvibrio japonicus Ueda107]
          Length = 481

 Score = 40.4 bits (93), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P+ GTI    + +     Q  + ++++VP      + AKV+P+ I  +  G  A V+
Sbjct: 336 IRAPVRGTIQRIYTNTLGGVVQPGREVIEMVPLDDQLLVEAKVSPRDIAFLHPGQEAIVK 395

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI-TDLAFSDNNIELRNGFP 410
           F  Y  +     K  +E I P     D     +E    I+++ T+ A  D  + +  G  
Sbjct: 396 FTAYDFVVYGGLKGKVELISP-----DAITDEKERTFYIVRVRTERAGFDPALPIMPGMM 450

Query: 411 AEV-LFTAKNTTLA 423
            +V + T K T L+
Sbjct: 451 TQVDILTGKKTVLS 464


>gi|15902152|ref|NP_357702.1| hypothetical protein spr0108 [Streptococcus pneumoniae R6]
 gi|116516521|ref|YP_815617.1| hypothetical protein SPD_0115 [Streptococcus pneumoniae D39]
 gi|15457645|gb|AAK98912.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116077097|gb|ABJ54817.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
          Length = 450

 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 68/178 (38%), Gaps = 2/178 (1%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           K+M R  N+   +A   +A  + E+      N ++  +  + L +     +  +IL+P  
Sbjct: 252 KDMNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQDKAHSILAPNE 311

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+ Y          QQ Q + ++    K  Y+ A V    I  V KG    V       
Sbjct: 312 GTLHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKVDVAITGVNS 371

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEV 413
            +    K  + +ID     Q+        Y+V++++  L        + L+   P EV
Sbjct: 372 QKYGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVVLQKDMPVEV 429


>gi|84500426|ref|ZP_00998675.1| type I secretion membrane fusion protein, HlyD family protein
           [Oceanicola batsensis HTCC2597]
 gi|84391379|gb|EAQ03711.1| type I secretion membrane fusion protein, HlyD family protein
           [Oceanicola batsensis HTCC2597]
          Length = 436

 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 72/429 (16%), Positives = 173/429 (40%), Gaps = 49/429 (11%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           +WS+   I  +V + G++  + N   ++    G++ +  V+ G  +  G  L+  +D + 
Sbjct: 31  SWSVFTQISGAVIAGGQLEVDRNRQVVQHLDGGVVTEILVDEGDLVESGQLLVRLDDTQL 90

Query: 93  TD---LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA---FESREEQLLDFLGKYH 146
                +I+ +   +   R  ++ E+   + L+    +LE A    E+RE           
Sbjct: 91  RSQLAIIEGQLFELMARRGRLEAERDGREDLDFDPLLLEAAQTKAEARE---------LM 141

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              +++    ++SV + ++ +L + RS       ++N+   + A L++  + + ++++  
Sbjct: 142 EGQTRLAEARLASVEKEIE-QLEKRRS------QIDNQIEGIDAQLAAFSEQIELIQDEL 194

Query: 207 E-KNAVSQNDLNQQERI--VYKSTLELRENIHEQKNMLRHINELYDEANLEF-----ANY 258
           E + ++    L Q  R+  + +   +L   + E             E ++E         
Sbjct: 195 EDQQSLLDRGLAQASRVSALRRENAQLSGTVGELTAQRAQAEGRMTEIDIEILKLDTTRR 254

Query: 259 LKEISR---------DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            + I+R         +L++ +R   +++++L I           +P+AG +   Q ++  
Sbjct: 255 EEAITRLRDLQYRELELKEQRRALIEQLNRLEIT----------APVAGIVYGLQVYAER 304

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           +  + + P++ +VP  +   I A+V P  I  ++     T+RF  +      + +  + +
Sbjct: 305 SVLRPADPVLYLVPQDRPLVIAARVEPIHIDQLRIDQPVTLRFSAFDQRNTPELEGRVVQ 364

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           I       D+  ++    E+ L   +         L  G P E     ++ T     + P
Sbjct: 365 ISADAFTDDSTGRSFYRTEIELSEGEQDKLPEGSHLIPGMPVEAFIKTRDRTPMAYFMQP 424

Query: 430 ITDNWPKIF 438
             D + K F
Sbjct: 425 FMDYFAKAF 433


>gi|197302403|ref|ZP_03167459.1| hypothetical protein RUMLAC_01131 [Ruminococcus lactaris ATCC
           29176]
 gi|197298524|gb|EDY33068.1| hypothetical protein RUMLAC_01131 [Ruminococcus lactaris ATCC
           29176]
          Length = 693

 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
           FLGK +    ++ + G++ VY+    KL R  +I + + D  +  + ++  LS  Q    
Sbjct: 7   FLGKRYEILGRIGSGGMADVYKGKDHKLNRFVAIKVLKSDYRSDETFIKKFLSEAQ---- 62

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
               L   N V+  D+  Q+R +Y   +EL E I
Sbjct: 63  AAAGLMHPNVVNVYDVG-QDRGLYYMVMELVEGI 95


>gi|323496474|ref|ZP_08101532.1| HlyD family secretion protein [Vibrio sinaloensis DSM 21326]
 gi|323318751|gb|EGA71704.1| HlyD family secretion protein [Vibrio sinaloensis DSM 21326]
          Length = 463

 Score = 40.0 bits (92), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 88/444 (19%), Positives = 182/444 (40%), Gaps = 42/444 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + +I  I    W+    I+      G+++    +  +++   G+IK   
Sbjct: 27  NTPNSARIMLWIMVIFFILAGVWASWAQIDKVTVGQGKVVPSSQIQVVQNLEGGLIKDIL 86

Query: 72  VENGSQILQGTPLLTFEDIE-TTDLIDLKK------VSIKNLRCHIDTEKSALDFLNNKY 124
           V+ G ++ +G  LL  +D    +D  + ++       S+  L   I + +   +F N  +
Sbjct: 87  VQEGQKVEKGQQLLLIDDTRFRSDFREREQQVANLTASVMQLSASITSVEINEEFDNKNW 146

Query: 125 ------DVLEKAFESREEQLLDFL-----GKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                 D  + AF  +  +L   L      +Y    +K+ N  IS + + +K K   +  
Sbjct: 147 QNNVLIDFNKLAFPPQLSELKPRLVERQRAEYRQDLNKLRNQ-ISVIDQQVKQKQQDLVE 205

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           I     +L +  +  R       K+L + K L ++  V Q +L + +R V  +  EL  +
Sbjct: 206 IQARVRNLRDSYNFAR-------KELDITKPLADEGVVPQIELLKLQRQVNDTRRELTSS 258

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKTREQ 289
              +  +LR       EA L   +  ++   + ++      D++S +T     LE    +
Sbjct: 259 -ELKVPVLRSA---IREAMLSRIDVAQKFRSEQQEKLNEAQDKLSAMTESAVGLEDRVNR 314

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++      
Sbjct: 315 TVVTSPVTGTVKTLNINTVGGVIQPGMDIVEIVPSEDTLLVEAKIAPQDIAFLRPDLPTI 374

Query: 350 VRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELR 406
           V+F  Y   +    +  +E I  D    ++ N+     +Y V ++  + + + D+++ + 
Sbjct: 375 VKFSAYDFTKYGGLEGTLEHISADTTTDEEGNS-----FYLVRVRTKETSLNKDSSLPII 429

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPI 430
            G  A V       T+ + ++ PI
Sbjct: 430 PGMTASVDIITGKRTVMEYLMKPI 453


>gi|261251553|ref|ZP_05944127.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio orientalis CIP 102891]
 gi|260938426|gb|EEX94414.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio orientalis CIP 102891]
          Length = 463

 Score = 40.0 bits (92), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 35/163 (21%), Positives = 69/163 (42%), Gaps = 12/163 (7%)

Query: 275 DEMSKLT----ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           D++S LT     LE    +  + SP+ GT+      +     Q    +++IVP      +
Sbjct: 296 DKLSSLTESTVGLEDRVNRTIVTSPVTGTVKTLNVNTVGGVIQPGMDIVEIVPSEDTLLV 355

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYE 388
            AK+ P+ I  ++      V+F  Y   +    +  +E I  D    ++ N+     +Y 
Sbjct: 356 EAKIAPQDIAFLRPDLQTIVKFSAYDFTKYGGLEGTLEHISADTTTDEEGNS-----FYL 410

Query: 389 VILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           V ++  + +   DN++ +  G  A V       T+ + ++ PI
Sbjct: 411 VRVRTKETSLDKDNSLPIIPGMTASVDIITGKRTILEYLLKPI 453


>gi|254513084|ref|ZP_05125150.1| type I secretion membrane fusion protein, HlyD [Rhodobacteraceae
           bacterium KLH11]
 gi|221533083|gb|EEE36078.1| type I secretion membrane fusion protein, HlyD [Rhodobacteraceae
           bacterium KLH11]
          Length = 436

 Score = 40.0 bits (92), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 83/432 (19%), Positives = 176/432 (40%), Gaps = 36/432 (8%)

Query: 16  SLKRMTLLSIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           S+++  L+S   I GL      W+ L  I  +V + G I+   +   I+ P  G++K+  
Sbjct: 13  SVRKHVLISYFAIFGLFGSVFAWAYLTKISGAVIAPGTIVVLGHNKSIQHPDGGVVKEIF 72

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLE 128
           V++G  + +   LL  +       ++L + S   L   R  I  E    D +    ++++
Sbjct: 73  VKDGDIVQENDLLLRLDATALHANVELARNSYLELIAERARIVAELEGQDRILFPKELIQ 132

Query: 129 KAFESREEQLLD------FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           + F S + Q +        + +  +   +V    + S Y  +   L+ +R+  + R   +
Sbjct: 133 Q-FHSDDVQDIIRQNRELLIARMAARDRQVAQ--LESQYSQVSANLSGLRAQAVAR---Q 186

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            ++ ++   +S        M+ LFEK  V  + +   +R  Y+++  L+    E + +  
Sbjct: 187 QENDIVGERVSD-------MQVLFEKELVPSSTIAAAKRDEYRTSGLLQATYSEIQRVEM 239

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI----LEKTREQKTILSPIAG 298
            + EL     L+  +  K+   D+         E+ +  I     EK   +  I +P  G
Sbjct: 240 QLIEL----RLQIESVEKDAHADMIARLSEMRLEIVQARINMEHAEKQVSRVAIRAPTRG 295

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            I      +     Q ++P+++I+P      +  KV P  I+ V    T +++FP     
Sbjct: 296 VIHDMSVHTIGGVIQPAEPVLEILPIDDDLILELKVRPVDIKKVFPHQTVSIQFPGLNAR 355

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             ++  A ++ +   + Q  + +  Q+YY     +     +   + L  G PA      +
Sbjct: 356 TVQRVDARLDYVSRDLLQ--DPIDGQQYYTARAHLIKKKQALEKVNLVAGMPAIAFIQTR 413

Query: 419 NTTLAQEIIHPI 430
             T+   ++ P+
Sbjct: 414 ERTVLDYLVEPL 425


>gi|163760945|ref|ZP_02168023.1| putative HlyD family secretion protein [Hoeflea phototrophica
           DFL-43]
 gi|162281726|gb|EDQ32019.1| putative HlyD family secretion protein [Hoeflea phototrophica
           DFL-43]
          Length = 457

 Score = 40.0 bits (92), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 80/374 (21%), Positives = 147/374 (39%), Gaps = 76/374 (20%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            + W+   P+    + +GEI+    V  I+    GI+ +  V  G +++QG P+L  +D+
Sbjct: 58  FLVWASFAPVTEIATGTGEIVPNGFVQTIQHLEGGIVAELFVREGDRVVQGKPILRMDDL 117

Query: 91  ETTDLIDLKKVSIKNLRCHID--TEKSALDFLNNKYDVLEKAF------ESREEQLLD-- 140
            +   +   K     +R  I   + K+A++ ++    V E +       ES++   L   
Sbjct: 118 ASKAELAKAKSRADGIRLEIARRSSKTAVEPVS----VFEASLRLSAIAESQQAAALAED 173

Query: 141 ---------FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                     L +  +  +++F+       R  KM L  +R I    +D E   +     
Sbjct: 174 TLHAAQIEVALAEVETRKAELFSLS----QREQKM-LEELRIIERTLVDFEK--AFTAGA 226

Query: 192 LSSHQKD------LTMMKNLFE---KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           +S  ++D      + M  ++     + A ++  L+Q +  V     ELR    +      
Sbjct: 227 VSRSERDKIAREKIQMESSILTVTGQRAAAEAGLSQSQARVD----ELRAGFRQTAET-- 280

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I EL  E     A   +E+ R LE               L++T     I++P  G I  
Sbjct: 281 AIAELEIE-----AASTEELVRQLEDR-------------LDRT----LIVAPETGRIF- 317

Query: 303 NQSFSSSNYAQQSQP---LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
               ++SN  Q   P   + +I+P  +  Y   K+   QI  +  G  A+V+   +   R
Sbjct: 318 --DLAASNRGQVISPGEQIAQIIPEGQAIYAEVKIPADQIGFISPGMDASVKILTFDYTR 375

Query: 360 EKKFKAIIEKIDPI 373
              F +I  K+D I
Sbjct: 376 ---FGSIPAKVDSI 386


>gi|88703609|ref|ZP_01101325.1| HlyD family secretion domain protein [Congregibacter litoralis
           KT71]
 gi|88702323|gb|EAQ99426.1| HlyD family secretion domain protein [Congregibacter litoralis
           KT71]
          Length = 358

 Score = 40.0 bits (92), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 45  SSSGEILNEDNVVE---IKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           S+ GE+   D V++   I +PF+G +  FQV  G  +  GTPL+T +D+
Sbjct: 149 SARGELAEVDAVLQNKRISAPFAGRLGIFQVRLGDYVEAGTPLVTLQDV 197


>gi|158318986|ref|YP_001511494.1| dehydrogenase catalytic domain-containing protein [Frankia sp.
          EAN1pec]
 gi|158114391|gb|ABW16588.1| catalytic domain of components of various dehydrogenase complexes
          [Frankia sp. EAN1pec]
          Length = 585

 Score = 40.0 bits (92), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 17/41 (41%), Positives = 27/41 (65%)

Query: 49 EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
          E+     VVEI SPF+G++ +   E G+++  GTPLLT ++
Sbjct: 39 EVETAKAVVEIPSPFAGVLVERHGEAGTELAVGTPLLTIDE 79


>gi|148546923|ref|YP_001267025.1| RND family efflux transporter MFP subunit [Pseudomonas putida F1]
 gi|148510981|gb|ABQ77841.1| efflux transporter, RND family, MFP subunit [Pseudomonas putida F1]
          Length = 387

 Score = 40.0 bits (92), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 18/161 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLP--------------IEISVSSSGEILNED 54
           +KR   A    +TL+S+  ++ +  W I+ P              IE SV++ G  L   
Sbjct: 1   MKRPPLARRALITLVSLATLLAVSAWQIMPPRHDGLNTVTVSRGDIESSVTAIG-TLQPR 59

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V++ +  SG I+  +VE G  + +G  L+  +       +D  + S++NL+  +  ++
Sbjct: 60  RYVDVGAQASGQIRAIRVEVGDAVQEGQLLVEIDPSTQQAKLDAGRYSVENLQAQLQEQR 119

Query: 115 SALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKV 152
           +  +    K +    L     +REE +     +  +T +++
Sbjct: 120 AQHELARQKAERQQSLAAGGATREEDVQTARAELKATQARI 160


>gi|156977666|ref|YP_001448572.1| hypothetical protein VIBHAR_06454 [Vibrio harveyi ATCC BAA-1116]
 gi|156529260|gb|ABU74345.1| hypothetical protein VIBHAR_06454 [Vibrio harveyi ATCC BAA-1116]
          Length = 457

 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 77/369 (20%), Positives = 145/369 (39%), Gaps = 64/369 (17%)

Query: 14  PASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P+   R    +I   + L+  WSI+  ++I  S+ G+++   +   I++   G + +  V
Sbjct: 40  PSPWSRRIAFTIATFLLLVLIWSIVGRLDIHASAQGKVMVSSHSKVIQALEQGEVVEINV 99

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            NG  + QG  L+           +  ++S +++R  ++  +       N         E
Sbjct: 100 RNGQFVRQGDVLIQLNPAGAN--AESTRLSEQHVRYQLNKARLLALLSPNPMQSFTPPRE 157

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY-LNRLDLENKSSLLRAL 191
           +   Q+         T S+     + S Y+  +  L R+ +   +NR +LE     ++AL
Sbjct: 158 ATPAQI---------TASQQH---LQSEYQETQQMLERLNAERDVNRAELEANQQGIQAL 205

Query: 192 LSSHQKDLTMM---KNLFEKNAVSQNDLNQQER--------------------IVYKSTL 228
               Q  +T +   + L E NA+++ DL +QE+                        S +
Sbjct: 206 NKLKQNIVTRLHARRALMESNAIARVDLLEQEKEWLDVERDISNMQAQQAILKAKASSLV 265

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E RE +  QK +     E YDE N +    + EI ++L               I  K R+
Sbjct: 266 EQRETLLAQKRL-----EYYDELN-QIDGQIAEIEQEL---------------IKAKERQ 304

Query: 289 Q-KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           + + + SP+ G +      +    A  ++PLM IVP +        +  K +  V  G  
Sbjct: 305 RIQALRSPVDGVVQQLAIHTLGGVASPAEPLMVIVPQNADLEAEVNILNKDVGFVMAGQP 364

Query: 348 ATVR---FP 353
             ++   FP
Sbjct: 365 VEIKIDSFP 373


>gi|119896938|ref|YP_932151.1| HlyD family secretion protein [Azoarcus sp. BH72]
 gi|119669351|emb|CAL93264.1| putatice HlyD family secretion protein [Azoarcus sp. BH72]
          Length = 471

 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 57/242 (23%), Positives = 104/242 (42%), Gaps = 31/242 (12%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML--------RHINEL 247
           Q++L + K L    AVS+ +L + ER V +   E RE    Q + +        R I E+
Sbjct: 230 QQELKVTKPLAASGAVSEVELLRLERDVSRLRGE-REQSAAQISRIQSAIAESTRKIQEI 288

Query: 248 YDEANLEFANYLKE-ISR--DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                 +  N L + ++R   L Q  R  AD +          +   I +P+ GT+    
Sbjct: 289 ELTVRNQLRNELSDTMARLGSLTQGSRMLADRV----------KHAEIRAPMRGTVKRIL 338

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +     Q  + + +IVP      + A+V P  I  ++ G +A V+F  Y        +
Sbjct: 339 VNTVGGVVQPGKEVAEIVPLDDALILEAQVKPSDIAFLRPGQSALVKFSAYDFSIYGGLE 398

Query: 365 AIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTT 421
           A++++I  D ++     + +   +Y V ++    +  + N+ +  G  AEV + T K T 
Sbjct: 399 AVVDQISADTVV-----DAKGSAFYVVRVRTLHSSLGE-NLPIIPGMVAEVDILTGKKTI 452

Query: 422 LA 423
           L+
Sbjct: 453 LS 454


>gi|39995386|ref|NP_951337.1| HlyD family secretion protein [Geobacter sulfurreducens PCA]
 gi|39982148|gb|AAR33610.1| secretion protein, HlyD family [Geobacter sulfurreducens PCA]
 gi|298504387|gb|ADI83110.1| efflux pump, RND family, membrane fusion protein [Geobacter
           sulfurreducens KN400]
          Length = 390

 Score = 40.0 bits (92), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 42/217 (19%), Positives = 86/217 (39%), Gaps = 33/217 (15%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++D  ++  L +   VS++++ + ER +  +  +L          +   N+ Y +A+ E 
Sbjct: 162 REDAHLVAQLAKTGDVSRSEVIRSERALNDAEAQL----------INRKNKYYQDASAEL 211

Query: 256 ANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           A    EI+++     ++NQ+ F   M                +P+ G +   +  +    
Sbjct: 212 AKIEDEINQNEQVRTQRNQQLFDSVMK---------------TPVDGIVKNVRVTTQGGV 256

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +  + LM+IVP      I  KV P  I  ++ G  A +RF  +           +  + 
Sbjct: 257 LRSGEELMQIVPLDDKLIIETKVKPSDIAQIRPGLPAAIRFDAFDYTIHGAVDGTVAYVS 316

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
               ++++    Q YY V ++I       N +  R G
Sbjct: 317 ADTIKEESKAGEQTYYRVHVEIA----GSNPVRTRTG 349


>gi|294787754|ref|ZP_06752998.1| macrolide-specific efflux protein MacA [Simonsiella muelleri ATCC
           29453]
 gi|294484047|gb|EFG31730.1| macrolide-specific efflux protein MacA [Simonsiella muelleri ATCC
           29453]
          Length = 395

 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 55/101 (54%), Gaps = 5/101 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI +  N+V++ +  SG IK+  V+ G ++  G  +   +++   + ++ K
Sbjct: 47  ISQTVSATGEI-SATNLVDVGAQVSGQIKRMHVKIGDEVKTGDLIAEIDNVTQVNEVNTK 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYD----VLEKAFESREE 136
           K  ++  +  + + + A+     KYD    +L++   S+EE
Sbjct: 106 KAQLETYQAQLASAEVAVKIAQRKYDRYKGLLQQGAVSQEE 146


>gi|312113275|ref|YP_004010871.1| efflux transporter RND family, MFP subunit [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311218404|gb|ADP69772.1| efflux transporter, RND family, MFP subunit [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 364

 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 6/154 (3%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R ++   K  L      +D A  E A    E  + L+Q     A   + + + E    Q+
Sbjct: 114 RADLETAKAKLEFARLQFDRAQ-ELAPKGAESRQMLQQRAAELAQGEAAVRLAEARLTQR 172

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           TI +P AG +   +  +   Y    +PL+ +    +L Y+   +  +++  +  G   +V
Sbjct: 173 TIRAPFAGRLGVRR-VNLGQYVNAGEPLVTLTALDRL-YVNFTLPQQELSKLANGGKVSV 230

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           R   +    E+ F+A I  I+P+++ +  N+  Q
Sbjct: 231 RTDAWP---ERDFEARINAIEPVVAAETRNISVQ 261


>gi|89094687|ref|ZP_01167623.1| Type I secretion membrane fusion protein, HlyD [Oceanospirillum sp.
           MED92]
 gi|89081033|gb|EAR60269.1| Type I secretion membrane fusion protein, HlyD [Oceanospirillum sp.
           MED92]
          Length = 439

 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 62/325 (19%), Positives = 126/325 (38%), Gaps = 40/325 (12%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS--- 102
             GEI+    +  I++   G + +  V  G  + +G  L   +DI  +  +   +V    
Sbjct: 55  GDGEIIPSSQLQVIETLEGGAVSEILVHEGDLVEKGQVLFRIDDIRFSSSLKENEVRQYE 114

Query: 103 --IKNLRCHIDTEK----SALDFLNNKYDVLEKA---FESREEQLLDFLGKYHSTCSKVF 153
              K  R   + E     +  DF      +L++    F +R+ ++L  LG      ++  
Sbjct: 115 LIAKAARLRAEAENKEFVAPADFPEEYRAMLQQEQHLFGTRKAEMLTSLGGLEQQVAQ-- 172

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                        ++  +++       L+    LL+       ++L + + L ++  +S+
Sbjct: 173 -------------RVQELKAAQSQEKQLQRSYGLLK-------RELDITRPLLKEGVISE 212

Query: 214 NDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            +  + +R +     EL   R NI   ++ L+   +  D A L+F N   E  R+L +  
Sbjct: 213 VEFLRLKRQLNDLQGELSGVRLNIPRIESTLQETKQKLDGAELQFRN---EAQRELNEVV 269

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A     LT +    ++  + SP+ GT+      +     Q    L+ I+P      +
Sbjct: 270 AEGARIKQALTGMSDRIDRAEVRSPVKGTVKQMLVNTVEGVVQPGDELLNIIPWEDKLLV 329

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHY 355
            AK+ P  I ++  G  A ++   Y
Sbjct: 330 EAKIKPSDIANIAPGQPAVIKVSAY 354


>gi|304386778|ref|ZP_07369045.1| HlyD family type I secretion membrane fusion protein [Neisseria
           meningitidis ATCC 13091]
 gi|254670581|emb|CBA06488.1| hemolysin secretion protein D [Neisseria meningitidis alpha153]
 gi|304339128|gb|EFM05215.1| HlyD family type I secretion membrane fusion protein [Neisseria
           meningitidis ATCC 13091]
          Length = 475

 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 132/352 (37%), Gaps = 62/352 (17%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET- 92
           WS    I+I  ++SG+ ++      I+   + ++K   V +G  + QG  L   E + T 
Sbjct: 72  WSWFGKIDIVAAASGKTVSGGRSKTIQPLETAVVKAVHVRDGQHVKQGETLAELEAVGTD 131

Query: 93  TDLID----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +D++     L+   +  LR                Y+ +  A ESR    +D        
Sbjct: 132 SDVVQSEQALQAAQLSKLR----------------YEAVLAALESRTVPHIDM------- 168

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++  + G+S         L + +       D +     L++ L  HQ +L   K   E+
Sbjct: 169 -AQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQ-----LQSALRGHQAELQSAKAQ-EQ 221

Query: 209 NAVSQNDLNQQERIVYK-----------STLELRE-------NIHEQKNMLRHINELYDE 250
             VS   + QQ+   Y+           + LE +        ++   +  +R I     +
Sbjct: 222 KLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQAAIAQ 281

Query: 251 ANLEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQ-KTILSPIAGTIVYNQS 305
           A        + + RD    L Q      D+    T   K R+Q  TI SP  GT+    +
Sbjct: 282 AEQSRVLNTQNLKRDTLDALRQANEQI-DQYRGQTDKAKQRQQLMTIQSPADGTVQELAT 340

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           ++     Q +Q +M + P      +   V  K I  V++G  A V+   FP+
Sbjct: 341 YTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAMVKIESFPY 392


>gi|312877144|ref|ZP_07737114.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311796044|gb|EFR12403.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 466

 Score = 40.0 bits (92), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 69/155 (44%), Gaps = 32/155 (20%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           IIGL+ WSI+  I+I+V   G I   ++   I S   G +K+  V+ G  + +G  L   
Sbjct: 37  IIGLVLWSIVGEIDINVKVQGIIRPWEDEARIISYVGGKVKEIFVKEGEYVKKGEVLFKI 96

Query: 88  EDIETTDLIDL---------KKVS-IKNLRCHIDTEKSALDFLNNKYDV----------- 126
           +D E     DL         KKVS +K LR  I+  +S    L NK +V           
Sbjct: 97  DDEEYVKKRDLLKQQLREYEKKVSDLKELRKSIEKGES----LRNKNNVYYLRYLSYSYE 152

Query: 127 ---LEKAFES----REEQLLDFLGKYHSTCSKVFN 154
              L+KA E     RE  ++DF  +  S   K+ N
Sbjct: 153 VNKLKKAAEEERVQREYSIMDFKKQIESLDEKIKN 187


>gi|296114498|ref|ZP_06833151.1| type I secretion membrane fusion protein, HlyD family
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295978854|gb|EFG85579.1| type I secretion membrane fusion protein, HlyD family
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 496

 Score = 40.0 bits (92), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 67/353 (18%), Positives = 146/353 (41%), Gaps = 46/353 (13%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A+L  + ++  + I GL+  +  LP++  V ++G ++  D  + ++   + II+   V  
Sbjct: 67  AALYIIWVIGGLAIAGLLVMT-FLPLDRVVMTNGRLVAADGTLVVQPLETSIIRSIDVHE 125

Query: 75  GSQILQGTPLLTFED-IETTDLIDLKK--VSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           G  + +G  L   +  I   D+ +++K   S +     +  E +  D++ +  D      
Sbjct: 126 GDIVHKGDVLAQLDPTISDADVENMRKQAASYRAEVARLTAEAAGHDYVPDMSD------ 179

Query: 132 ESREEQLLDFLGKYHSTCSKVFNY-----GISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +  ++  DF+ +     +KV NY     G+ S  +  +       ++Y  R  + +   
Sbjct: 180 PASIQEAADFMRRRSEYSAKVANYDRQIVGLQSDLQGYEAST----AMYAARAKVASDVR 235

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +R  L  H++  + +  L      SQ+ L +    V +S +  R   H+       ++ 
Sbjct: 236 DMRVRLQ-HEQVGSRLSTL-----ASQDSLME----VVRSQITAR---HDADATRARLDA 282

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKL-------TILEKTREQKTILSPIAGT 299
           +  + +    N+   I +DL   Q   AD  S         T+++   E+  ++  IA  
Sbjct: 283 MKAQRDGYIGNWQATIYQDLSVAQHHLADADSSYRKAMLHHTLVQMRAEKDAVVLSIA-- 340

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
                  S+ +  Q + PLM +VP      + + +    + +V+ G  A ++F
Sbjct: 341 -----RLSTGSVLQAASPLMTLVPVDGRLEVESVMRGLDVGYVRPGDRALLKF 388


>gi|283779581|ref|YP_003370336.1| hypothetical protein Psta_1801 [Pirellula staleyi DSM 6068]
 gi|283438034|gb|ADB16476.1| hypothetical protein Psta_1801 [Pirellula staleyi DSM 6068]
          Length = 659

 Score = 40.0 bits (92), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 7/114 (6%)

Query: 11  RNHPASLKRMTLLSIIGII-GLITWSILL-PIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           R+H  + +R+  L+++GI+ G IT ++LL P E++V +SGE++ +     + +P  G++ 
Sbjct: 361 RDH--ARQRLAQLALLGIVLGAITAALLLIPAELTVEASGELVPQVR-QHVFAPADGVVI 417

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           +     G  + +G PL   +    T  I L +V  K  +   D + +    L +
Sbjct: 418 RLAGREGMSVRKGEPLAELDS--PTLAIRLSEVGGKRRKTKEDLDSAQAQLLGD 469


>gi|261392042|emb|CAX49532.1| putative FrpA/C secretion adaptor protein [Neisseria meningitidis
           8013]
          Length = 475

 Score = 40.0 bits (92), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 75/352 (21%), Positives = 132/352 (37%), Gaps = 62/352 (17%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET- 92
           WS    I+I  ++SG+ ++      I+   + ++K   V +G  + QG  L   E + T 
Sbjct: 72  WSWFGKIDIVAAASGKTVSGGRSKTIQPLETAVVKAVHVRDGQHVKQGETLAELEAVGTD 131

Query: 93  TDLID----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +D++     L+   +  LR                Y+ +  A ESR    +D        
Sbjct: 132 SDVVQSEQALQAAQLSKLR----------------YEAVLAALESRTVPHIDM------- 168

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++  + G+S         L + +       D +     L++ L  HQ +L   K   E+
Sbjct: 169 -AQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQ-----LQSALRGHQAELQSAKAQ-EQ 221

Query: 209 NAVSQNDLNQQERIVYK-----------STLELRE-------NIHEQKNMLRHINELYDE 250
             VS   + QQ+   Y+           + LE +        ++   +  +R I     +
Sbjct: 222 KLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQAAIAQ 281

Query: 251 ANLEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQ-KTILSPIAGTIVYNQS 305
           A        + + RD    L Q      D+    T   K R+Q  TI SP  GT+    +
Sbjct: 282 AEQSRVLNTQNLKRDTLDALRQANEQI-DQYRGQTDKAKQRQQLMTIQSPADGTVQELAT 340

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           ++     Q +Q +M I P      +   V  K I  V++G  A V+   FP+
Sbjct: 341 YTVGGVVQVAQKMMVIAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY 392


>gi|29655320|ref|NP_821012.1| HlyD family type I secretion membrane fusion protein [Coxiella
           burnetii RSA 493]
 gi|161831332|ref|YP_001595939.1| HlyD family type I secretion membrane fusion protein [Coxiella
           burnetii RSA 331]
 gi|29542592|gb|AAO91526.1| type I secretion adaptor protein (HlyD family) [Coxiella burnetii
           RSA 493]
 gi|161763199|gb|ABX78841.1| type I secretion membrane fusion protein, HlyD family [Coxiella
           burnetii RSA 331]
          Length = 442

 Score = 40.0 bits (92), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 83/374 (22%), Positives = 163/374 (43%), Gaps = 43/374 (11%)

Query: 5   MWKNLKRNHPASL--KRMTL-LSII--GIIG-LITWSILLPIEISVSSSGEILNEDNVVE 58
           +W   K+    S+  +R+ L L+II  GI+   I W+  + I+    + GEI   + +  
Sbjct: 6   LWYLPKKTQIESIQSRRLALSLAIIICGILAAFIIWAYFVRIQELSLAVGEITPVNRISV 65

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR--CHIDTEKSA 116
           ++    G++ +  V+ GSQ+ +G PL   +  ET    +L+++  K+L    +++ EKS 
Sbjct: 66  VEHLEGGLVYQILVDEGSQVKKGQPLAKID--ETLAKAELQQLEAKHLTLMSNVEREKSL 123

Query: 117 LDFLNNKYDVLEKAFESREE-----QLLDFLGKYHSTCSKVFNYGISSVYRSLKMK---L 168
           ++  +    +   A  + E      ++L+   + H   S+  N   + + + +  +   L
Sbjct: 124 IEKTDFSPTLPATAVHNNEPDISVNEILERQQQLHQLQSQALNAQQAVIVQQILQREEEL 183

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER---IVYK 225
            ++R     +L+   K+++L      H++++TM + L E   +S+ DL + ER       
Sbjct: 184 LKLR----QQLETAKKNAVL------HREEVTMFRKLIEPGYISRLDLIRAERSLNTAEG 233

Query: 226 STLELRENIHEQKNMLR----HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
           +  EL + I   K   +     + EL      + A+ L+    +L Q Q  FA +  K  
Sbjct: 234 TVTELTKEISIAKQAFQEAESRLTELIQTEMQKMADRLQRSQHELFQVQ--FAIQKLKYH 291

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +         + +PIAGT+V N   +           M IVP +       ++ P  I  
Sbjct: 292 L-----ANTVVRAPIAGTVV-NMKITEGKVLAAGGFAMNIVPLNAPLRAEIRIRPADIGF 345

Query: 342 VKKGYTATVRFPHY 355
           ++ G    V+   Y
Sbjct: 346 IRIGDPVLVKVTAY 359


>gi|302038614|ref|YP_003798936.1| putative membrane-fusion protein [Candidatus Nitrospira defluvii]
 gi|300606678|emb|CBK43011.1| putative Membrane-fusion protein [Candidatus Nitrospira defluvii]
          Length = 330

 Score = 40.0 bits (92), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 22/96 (22%), Positives = 47/96 (48%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P E +V+++G I   +  V I  P +G++    V  G ++ +G PLL  +D +    +  
Sbjct: 43  PYETTVAATGIIEAANENVRIGPPMAGLVTNVFVTVGDRVREGDPLLQLDDRDLRAQLVA 102

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           ++ +I      ++ +K  +  L+ +   L+   +SR
Sbjct: 103 RQAAIPPAEAQVEEQKYRIGDLDTQLKRLKSVRDSR 138


>gi|313836306|gb|EFS74020.1| 2-oxo acid dehydrogenase acyltransferase [Propionibacterium acnes
          HL037PA2]
 gi|314928770|gb|EFS92601.1| 2-oxo acid dehydrogenase acyltransferase [Propionibacterium acnes
          HL044PA1]
 gi|314971194|gb|EFT15292.1| 2-oxo acid dehydrogenase acyltransferase [Propionibacterium acnes
          HL037PA3]
 gi|328906481|gb|EGG26256.1| dihydrolipoamide acetyltransferase component of pyruvate
          dehydrogenase complex [Propionibacterium sp. P08]
          Length = 470

 Score = 40.0 bits (92), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 49 EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
          E+    ++VE+ SPF+G + K   E G  +  G PL+T +D
Sbjct: 37 EVETAKSIVELPSPFAGTVAKLCAEPGETVAVGAPLVTIDD 77


>gi|294142619|ref|YP_003558597.1| HlyD family secretion protein [Shewanella violacea DSS12]
 gi|293329088|dbj|BAJ03819.1| HlyD family secretion protein [Shewanella violacea DSS12]
          Length = 460

 Score = 40.0 bits (92), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 71/393 (18%), Positives = 156/393 (39%), Gaps = 26/393 (6%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           ++  +  + P S  R+ + S+   I+  + W+    ++   +  G+++    +  I+S  
Sbjct: 16  VYGAMMTDAPTS-HRLIIWSLAAMIVCFLVWAYFSELDQVTTGMGKVIPSSQIQVIQSLD 74

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI+++  V+ G  + +G  L+  +D       + +   + +L+ ++    S L  +   
Sbjct: 75  GGIMQEMYVKEGMMVTKGQALMRIDDTRFRSDYEQQAQEVYSLQANVVRLSSELSSIT-- 132

Query: 124 YDVLEKAFESREE-----QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM----RSI 174
             +   +   RE+     + L F G+       +        +  L   + ++    R I
Sbjct: 133 --ITSMSVNWREQVKITPRPLQFPGELIKDEPALVQRQSDEYFGRLDSLINQLEILARQI 190

Query: 175 YLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
              + + +  +S +  L  S+Q   ++L + K L +K  V + +L + ER+V     ++R
Sbjct: 191 QQKQQESKELASKIDTLSRSYQLVSRELELTKPLADKGIVPEVELIKVERVVN----DIR 246

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +   + +   +    DEA L+    +   + D          ++S++   +   + K 
Sbjct: 247 GELASLRLLRPKLKASQDEAILKRREAVLNFAADARTQLNELQTKLSRMNEAQVGAQDKV 306

Query: 292 ----ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               I SP+ GTI      +     Q    +++IVP      I  K+ PK I  +  G  
Sbjct: 307 DKAEITSPVNGTIKTIHINTLGGVVQPGIDIIEIVPSEDQLLIETKILPKDIAFLHPGLP 366

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           A V+   Y   R      ++E I    +Q +  
Sbjct: 367 AVVKVTAYDFTRYGGLNGVVEHISADTTQDEEG 399


>gi|117924040|ref|YP_864657.1| HlyD family type I secretion membrane fusion protein [Magnetococcus
           sp. MC-1]
 gi|117607796|gb|ABK43251.1| type I secretion membrane fusion protein, HlyD family
           [Magnetococcus sp. MC-1]
          Length = 455

 Score = 40.0 bits (92), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 78/388 (20%), Positives = 147/388 (37%), Gaps = 66/388 (17%)

Query: 15  ASLKRMTLLSIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           A + R+  ++ + + G I     W+    +E    ++GE+   D +   +    GI+ + 
Sbjct: 35  AGISRLLKIATVAVAGAILIFFIWANFANMEEVAHTTGEVATTDTIQFAQHLEGGIVGEI 94

Query: 71  QVENGSQILQGTPL--LTFEDIET------------------------TDLIDLKKVSIK 104
            +E G ++ QG PL  +  ED+                          ++ IDL  +  +
Sbjct: 95  FIEEGQRVTQGQPLAQMKSEDVLAEYNQMHAREAILALQVAQKRALINSEPIDLSGIE-R 153

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  H+  E  ++DFL    D    +  S+ E +L  + +      K+ N          
Sbjct: 154 PLFDHMIAE--SVDFL----DAQRTSLASQREVILIQVKQKEMKLKKLLN---------- 197

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + +  R +  Y N  +LE +  L    L S  + L+ M++  +  A    D+ + E  V 
Sbjct: 198 QAQANRQQVQYYNE-ELEVRRPLTERKLMSRLQTLSAMQSREKTRA----DMLESEGDVE 252

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            + LEL E   + +N+    +  Y +A  E      E+++ +        D M++L    
Sbjct: 253 VTKLELDE---KWQNLRETEDSFYQDAMRELDGAYSELTQ-IRTTLPRLRDRMTRL---- 304

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
                  + SP+ G I   +     +       + +IVP      +  K+T   I HV  
Sbjct: 305 ------VVRSPVDGVIKEIKVNGVGSVLGPGGEIAEIVPLEDTNKVEVKITTVDIGHVAV 358

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDP 372
           G   TV+   Y   R    +  +  + P
Sbjct: 359 GQDVTVKVSTYDYARYGGIQGKLIAVSP 386


>gi|258544118|ref|ZP_05704352.1| RTX toxin transporter [Cardiobacterium hominis ATCC 15826]
 gi|258520626|gb|EEV89485.1| RTX toxin transporter [Cardiobacterium hominis ATCC 15826]
          Length = 477

 Score = 40.0 bits (92), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 8/152 (5%)

Query: 211 VSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           V QN ++    +  KS L E + ++  ++N    I    DEA    A   + I RD    
Sbjct: 243 VKQNFISNHAYLEQKSKLIENQNDLKSKRNQREQIKAAIDEAKDSRAVNTQTIRRDTLDA 302

Query: 270 QRTFADEMSKLTI-LEKTREQKTIL---SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
            R   ++ ++L   L+K ++++ ++   +P++GT+    + +       +QPL+ IVP  
Sbjct: 303 LRQADEQSAQLRAQLDKAQQRQRLMRLAAPVSGTVQQLATHTIGGVVTAAQPLLVIVPDD 362

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
               ++A +  K I  V++G  A ++   FP+
Sbjct: 363 YQLNVKALILNKDIGFVRQGQEAVIKIEAFPY 394


>gi|91776427|ref|YP_546183.1| dehydrogenase catalytic domain-containing protein
          [Methylobacillus flagellatus KT]
 gi|91710414|gb|ABE50342.1| catalytic domain of components of various dehydrogenase complexes
          [Methylobacillus flagellatus KT]
          Length = 442

 Score = 40.0 bits (92), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 9/61 (14%)

Query: 40 IEISVSSSGEILNEDNVV---------EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
          IE+ VS+   I  +D+++         +I +PFSG +K+ +V+ G ++ QGT +LT + +
Sbjct: 20 IEVLVSAGDTIAKDDSLITLESDKASMDIPAPFSGTVKEVKVKVGDKVAQGTLILTMDAL 79

Query: 91 E 91
          E
Sbjct: 80 E 80


>gi|315637082|ref|ZP_07892305.1| LapA secretion membrane fusion protein [Arcobacter butzleri JV22]
 gi|315478618|gb|EFU69328.1| LapA secretion membrane fusion protein [Arcobacter butzleri JV22]
          Length = 489

 Score = 40.0 bits (92), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 69/366 (18%), Positives = 147/366 (40%), Gaps = 54/366 (14%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +H   L  + +  ++ I   + WS    I+     SG+++       ++    GI+++  
Sbjct: 71  HHSKKLHWVVIAFLVTIFSFLIWSSFAEIDEIARGSGKVVPSGQNQIVQHLEGGIVQEIL 130

Query: 72  VENGSQILQGTPLLTFEDIETTDLI---DLK----KVSIKNLRCHIDTEKSALDFLNNKY 124
           V+ G  + +   L+   + ++T  +   +LK    K  IK L   +  E    +  +N  
Sbjct: 131 VKEGDFVNKDQVLIRVSNEKSTSTVASNELKSYYYKAQIKRLEAELKREPFVYEITDN-- 188

Query: 125 DVLEKAFESREEQLLDFLG---KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                      +QL +FL    +++ T +K     ++ +   +K K   ++       D 
Sbjct: 189 -----------QQLNEFLNNENEFYLTNTKQLESKVNILKEQIKQKENELK-------DA 230

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +     ++  + +  K++ M K + E+   SQ D  + +R    +  +L+  I     + 
Sbjct: 231 QQTIEHMKFSVGAISKEVQMTKPMVERGIRSQVDFLKLQREESDAKNKLQSVILSVDKIN 290

Query: 242 RHINELYDEANLEFANYLKEIS----------RDLEQNQRTFADEMSKLTILEKTRE--Q 289
             I EL  + +  +  Y  +I           +D+E N     D++++ T++  +    Q
Sbjct: 291 SEIIELNKKIDETYGVYDAQIREKLNETYTQLKDIEANNVASVDQVTRNTVISPSNGIVQ 350

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           K  ++ I G I            + S  L++IVP      +  K+ PK I  + +G  A 
Sbjct: 351 KLHVNTIGGAI------------KPSSDLLEIVPTDHKLIVEVKILPKDIAFIYQGQKAI 398

Query: 350 VRFPHY 355
           V+F  +
Sbjct: 399 VKFSAF 404


>gi|288960977|ref|YP_003451316.1| type I secretion membrane fusion protein [Azospirillum sp. B510]
 gi|288913285|dbj|BAI74772.1| type I secretion membrane fusion protein [Azospirillum sp. B510]
          Length = 443

 Score = 40.0 bits (92), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 1/78 (1%)

Query: 12  NHPASLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           + P   +R   L I  ++  L  W+ + P++++ ++SGE++    V  I+    GI+ + 
Sbjct: 23  SRPLPSRRRIALEIAAVLLALGAWAAVGPLDVATTASGEVVPASRVKAIQHLEGGIVTEI 82

Query: 71  QVENGSQILQGTPLLTFE 88
               G ++ +G PL   +
Sbjct: 83  LASEGDRVSRGQPLFRLD 100


>gi|307822569|ref|ZP_07652800.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
 gi|307736173|gb|EFO07019.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
          Length = 319

 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 3/99 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++ +G +  +   + I +P SGI+K   V+ G ++  G PL   +D +T   + +K+  +
Sbjct: 47  IAGAGIVEAKSQNIAIGTPLSGIVKTLAVKVGDKVKAGAPLFYLDDRDTRAELAVKRADL 106

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESR---EEQLL 139
              +  I+   ++L    +  D+ E   + R    E+LL
Sbjct: 107 AKAQAGINEANASLKDTQSLSDLAEAVTDRRAISSEELL 145


>gi|149910993|ref|ZP_01899623.1| Membrane-fusion protein [Moritella sp. PE36]
 gi|149805976|gb|EDM65961.1| Membrane-fusion protein [Moritella sp. PE36]
          Length = 459

 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 11/114 (9%)

Query: 268 QNQRTFADEMSKLTILEKTREQK-----------TILSPIAGTIVYNQSFSSSNYAQQSQ 316
           Q +R + D++S++ +   + EQK           TI +P+ GT+      +     Q +Q
Sbjct: 276 QRRREWHDKLSEVRVNLASTEQKLKQSQERHRLETIYAPLDGTVQQLAVHTIGGVVQPAQ 335

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
            L+ IVPH  +     KV  K    +  G   TV+   Y   R     A+++ I
Sbjct: 336 VLLLIVPHDGIQLAEIKVKNKDAGFITPGQPVTVKVDSYPYTRYGTIDAVVKHI 389


>gi|153206949|ref|ZP_01945767.1| type I secretion membrane fusion protein, HlyD family [Coxiella
           burnetii 'MSU Goat Q177']
 gi|120577022|gb|EAX33646.1| type I secretion membrane fusion protein, HlyD family [Coxiella
           burnetii 'MSU Goat Q177']
          Length = 357

 Score = 39.7 bits (91), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 159/364 (43%), Gaps = 43/364 (11%)

Query: 5   MWKNLKRNHPASL--KRMTL-LSII--GIIG-LITWSILLPIEISVSSSGEILNEDNVVE 58
           +W   K+    S+  +R+ L L+II  GI+   I W+  + I+    + GEI   + +  
Sbjct: 6   LWYLPKKTQIESIQSRRLALSLAIIICGILAAFIIWAYFVRIQELSLAVGEITPVNRISV 65

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK--NLRCHIDTEKSA 116
           ++    G++ +  V+ GSQ+ +G PL   +  ET    +L+++  K   L  +++ EKS 
Sbjct: 66  VEHLEGGLVYQILVDEGSQVKKGQPLAKID--ETLAKAELQQLEAKRLTLMSNVEREKSL 123

Query: 117 LDFLNNKYDVLEKAFESREE-----QLLDFLGKYHSTCSKVFNYGISSVYRSLKMK---L 168
           ++  +    +   A  + E      ++L+   + H   S+  N   + + + +  +   L
Sbjct: 124 IEKTDFSPTLPATAVHNNEPDISVNEILERQQQLHQIQSQALNAQQAVIVQQILQREEEL 183

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE---RIVYK 225
            ++R     +L+   K+++L      H++++TM + L E   +S+ DL + E        
Sbjct: 184 LKLR----QQLETAKKNAVL------HREEVTMFRKLIEPGYISRLDLIRAECSLNTAEG 233

Query: 226 STLELRENIHEQKNMLR----HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
           +  EL + I   K  L+     + EL      + A+ L+    +L Q Q  FA +  K  
Sbjct: 234 TVTELTKEISIAKQALQEAESRLTELIQTEMQKMADRLQRSQHELFQVQ--FAIQKLKYH 291

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +         + +PIAGT+V N   +           M IVP +       ++ P  I  
Sbjct: 292 L-----ANTVVRAPIAGTVV-NMKITEGKVLAAGGFAMNIVPLNAPLRAEIRIRPADIGF 345

Query: 342 VKKG 345
           ++ G
Sbjct: 346 IRIG 349


>gi|326334417|ref|ZP_08200629.1| HlyD family secretion protein [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325693384|gb|EGD35311.1| HlyD family secretion protein [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 310

 Score = 39.7 bits (91), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 20/163 (12%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           RA L+  +++LT  +NL    A +Q  L+    ++     +LR+ I   +N L+      
Sbjct: 104 RAQLAQQERELTRTQNLVRGGAATQKQLDDLSALID----QLRKQIAVTENQLKV---SL 156

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
              N +  N L +    L++N     ++++          Q  I++PIAGT++ N +   
Sbjct: 157 TNINTQNRNVLSQ-EAPLQKNAEAVQEQIN----------QGEIINPIAGTVLTNYALKG 205

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
                  +PL KI     LT ++A +T  Q+  +K G   TVR
Sbjct: 206 E-MQTFGKPLYKIANTDVLT-LKAYITGDQLSQIKLGQQVTVR 246


>gi|301061698|ref|ZP_07202439.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [delta proteobacterium NaphS2]
 gi|300444158|gb|EFK08182.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [delta proteobacterium NaphS2]
          Length = 376

 Score = 39.7 bits (91), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 24/178 (13%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R D     + L+  ++ +Q    M+K   EKNAVS+  L + E+ V      L+  I   
Sbjct: 129 RADAAQTQANLKGAVAKYQ----MIKRAAEKNAVSRIHLEEIEQRV----AALKAQIKAD 180

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           K  +R     +D A              +       A+ ++KL   +   +   I +P  
Sbjct: 181 KAAVRTAQLAFDSA--------------VGDEHTRIAEVLAKLATAKYNVKNTIIRAPSD 226

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           G    N       +A+  +P+M  V   K  +I AK+  + IQHV+ G  A V F  Y
Sbjct: 227 GYAA-NMQLYPGFFARLKKPVMSFVNTEKY-WIVAKMDQRGIQHVRPGDHAEVAFDMY 282


>gi|255065937|ref|ZP_05317792.1| LapA secretion membrane fusion protein [Neisseria sicca ATCC 29256]
 gi|255049848|gb|EET45312.1| LapA secretion membrane fusion protein [Neisseria sicca ATCC 29256]
          Length = 408

 Score = 39.7 bits (91), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 13/195 (6%)

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNYAQQSQ 316
           Y  + + +L Q++   A     + +     ++  I SP+ G IV N   ++        +
Sbjct: 215 YRTDANNELVQSESELAQSKENMAMRADPVDRSQIRSPMRG-IVKNIKINTIGGVVNPGE 273

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR-----FPHYADIREKKFKAIIEKID 371
            +M+IVP      + A + P+ I  V+ G  A V+     +  Y  +  K      + + 
Sbjct: 274 EIMQIVPVDDKLLVEAYIRPQDIAFVRAGQPALVKVSAYDYSIYGGLEGKVTLVGADTVS 333

Query: 372 PIISQQDNNLQ---TQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQE 425
             +  + N+L+    Q YY VI++  + A  D N   + +  G  A V       T+ Q 
Sbjct: 334 NSMQSRANDLKLDPNQVYYRVIVQTENNALKDKNGKDMPIIPGMVATVDIKTGEKTIFQY 393

Query: 426 IIHPITDNWPKIFER 440
           +I PIT     + ER
Sbjct: 394 LIKPITRMKQALSER 408


>gi|306821839|ref|ZP_07455429.1| membrane-fusion protein [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550121|gb|EFM38122.1| membrane-fusion protein [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 389

 Score = 39.7 bits (91), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 11/166 (6%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           KN V + +LN QE  +    +++ +N  + +    ++N L  +   E  N + E  + +E
Sbjct: 166 KNTVDEKELNNQE--IESQKIKILQNETKLQEAKSNLNNLESQEKQETLNLIVEKQKQIE 223

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVPHSK 326
               T    + K     K+ + +T+ SP  G IV   S ++       +Q +M IVP + 
Sbjct: 224 ----TLKASLEKAN---KSIDFQTLTSPTNG-IVQGISLNTVGGVVSPAQSIMSIVPENT 275

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              + A +  K I  VK+G  A+V+   ++  R    + ++EK+ P
Sbjct: 276 PLIVEAMLQNKDIGFVKQGQKASVKIDTFSFQRYGVLEGVVEKVSP 321


>gi|281424038|ref|ZP_06254951.1| putative ABC transport system, lipoprotein [Prevotella oris F0302]
 gi|281401821|gb|EFB32652.1| putative ABC transport system, lipoprotein [Prevotella oris F0302]
          Length = 312

 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 25/157 (15%)

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ------PLMKIV 322
           N +    ++ KL ++++ R+   I SPI G ++         YAQQ +      PL K+ 
Sbjct: 170 NAQMGTTDVEKLQVVDQLRKCH-ISSPINGVVL-------EKYAQQGEFAIVGKPLFKVA 221

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              KL ++RA +T +Q+Q V+ G   TV    YAD   K+ K+    +  I S+ +   +
Sbjct: 222 DVDKL-FLRAYITSQQLQKVRLGQRVTV----YADYGGKQRKSYPGTVAWIASKSEFTPK 276

Query: 383 T----QEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           T     E  +++  I     +D NI++  G   EV F
Sbjct: 277 TILTDDERADLVYAIKVAVKNDGNIKI--GMYGEVNF 311


>gi|254430123|ref|ZP_05043826.1| HlyD family secretion protein domain protein [Cyanobium sp. PCC
           7001]
 gi|197624576|gb|EDY37135.1| HlyD family secretion protein domain protein [Cyanobium sp. PCC
           7001]
          Length = 472

 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 23  LSIIGIIGLI--TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           L I+G   LI   W+ L PI   V +SGE++ E  V  ++    GI+ K  V +G ++ +
Sbjct: 66  LYILGAAALIFFPWAALTPITQVVQASGEVIPEGEVNVVQHLEGGIVAKVDVADGEEVTK 125

Query: 81  GTPLL 85
           G  +L
Sbjct: 126 GEVML 130


>gi|157737367|ref|YP_001490050.1| HlyD family secretion protein [Arcobacter butzleri RM4018]
 gi|157699221|gb|ABV67381.1| HlyD family secretion protein [Arcobacter butzleri RM4018]
          Length = 489

 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 69/366 (18%), Positives = 147/366 (40%), Gaps = 54/366 (14%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +H   L  + +  ++ I   + WS    I+     SG+++       ++    GI+++  
Sbjct: 71  HHSKKLHWVVIAFLVTIFSFLIWSSFAEIDEIARGSGKVVPSGQNQIVQHLEGGIVQEIL 130

Query: 72  VENGSQILQGTPLLTFEDIETTDLI---DLK----KVSIKNLRCHIDTEKSALDFLNNKY 124
           V+ G  + +   L+   + ++T  +   +LK    K  IK L   +  E    +  +N  
Sbjct: 131 VKEGDFVNKDQVLIRVSNEKSTSTVASNELKSYYYKAQIKRLEAELKREPFVYEITDN-- 188

Query: 125 DVLEKAFESREEQLLDFLG---KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                      +QL +FL    +++ T +K     ++ +   +K K   ++       D 
Sbjct: 189 -----------QQLNEFLNNENEFYLTNTKQLESKVNILKEQIKQKENELK-------DA 230

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +     ++  + +  K++ M K + E+   SQ D  + +R    +  +L+  I     + 
Sbjct: 231 QQTIEHMKFSVGAISKEVQMTKPMVERGIRSQVDFLKLQREESDAKNKLQSVILSVDKIN 290

Query: 242 RHINELYDEANLEFANYLKEIS----------RDLEQNQRTFADEMSKLTILEKTRE--Q 289
             I EL  + +  +  Y  +I           +D+E N     D++++ T++  +    Q
Sbjct: 291 SEIIELNKKIDETYGVYDAQIREKLNETYTQLKDIEANNVASVDQVTRNTVISPSNGIVQ 350

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           K  ++ I G I            + S  L++IVP      +  K+ PK I  + +G  A 
Sbjct: 351 KLHVNTIGGAI------------KPSSDLLEIVPTDHKLIVEVKILPKDIAFIYQGQKAI 398

Query: 350 VRFPHY 355
           V+F  +
Sbjct: 399 VKFSAF 404


>gi|47176986|ref|YP_015597.1| rhizobiocin secretional protein [Oligotropha carboxidovorans OM5]
 gi|47115388|emb|CAG28444.1| rhizobiocin secretional protein RspE [Oligotropha carboxidovorans
           OM5]
          Length = 447

 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 5/153 (3%)

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           E+  I +PIAG +      +     +  + L+++VP  +   I A++  + I  +  G+ 
Sbjct: 295 ERVDIRAPIAGIVHQLAMHTVGGVVRPGEVLLQVVPIKRELDIEARIRAQDIDRIALGHE 354

Query: 348 ATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
           A +RF  +      +    + K+  D I    D+   T  Y  +I    D A       L
Sbjct: 355 AVLRFVAFNRNSTPELIGAVTKVSADAI---ADSQTSTSFYKTIITLSADEARRLGRRTL 411

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             G P +      + T+   ++ P+ D+  + F
Sbjct: 412 VPGMPVDCYIRTSDRTVLSYLVKPLVDHATRAF 444


>gi|86137164|ref|ZP_01055742.1| type I secretion membrane fusion protein, HlyD family protein
           [Roseobacter sp. MED193]
 gi|85826488|gb|EAQ46685.1| type I secretion membrane fusion protein, HlyD family protein
           [Roseobacter sp. MED193]
          Length = 434

 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 12/89 (13%)

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN-QSFSSSNYAQQSQPLMKIVP 323
           +L +N+RT  + + +L I           +P++G IVY+ Q  +  +  + + P++ +VP
Sbjct: 268 ELGENRRTLLERLDRLDIA----------APVSG-IVYDLQVHTPRSVIRAADPVLYLVP 316

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
             +   I A+V+P  I+ +  G   T++F
Sbjct: 317 QDRPLVIAAQVSPTDIEQIYVGQDVTLKF 345


>gi|19718341|ref|NP_604413.1| accessory protein [Lactobacillus acidophilus]
 gi|19570486|dbj|BAB86321.1| accessory protein [Lactobacillus acidophilus]
          Length = 464

 Score = 39.7 bits (91), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 67/353 (18%), Positives = 148/353 (41%), Gaps = 35/353 (9%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
           +++ ++  + + +    E+++++SGE+      V ++S  +  I +  ++ G  + +G P
Sbjct: 34  AVMALVIALAFVLFAKREVTITTSGELTPVQKAVSVQSTTTSRIIENHLKEGRFVKKGDP 93

Query: 84  LLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           L+T+ D+     + + +   K L+     +D  K+ L    + ++  +  F  R+  L D
Sbjct: 94  LVTYHDVNNPTQLKVLETQTKQLQDQTAALDKYKTGLTSNQDTFN-QDDPFGYRQA-LQD 151

Query: 141 FLGK---YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +L +   Y     +V     S   ++ K+     +SI  +  ++    +LL A+   HQ 
Sbjct: 152 YLSQRRIYALGSQQVSGQQSSENSKTAKVGQLLQQSIASSNQNIAAYQALLTAI--QHQS 209

Query: 198 ---DLTMMKNLFEKNAVSQNDLNQQERIVYKSTL--ELRENIHEQKNMLRHI------NE 246
              D      L++       D+   +    K++   ++   +  +K+ L  +      NE
Sbjct: 210 GYNDSQPYSYLYKSFIAESKDMTGSDLDKVKTSYISQIDAKMDTEKSQLESLKLQQANNE 269

Query: 247 LYDEANLEF-----------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
             D +  +            A+ LK ++    Q  ++  +   K+ IL+      T+ +P
Sbjct: 270 ASDTSQQQLAENEQKMAALQASQLKSVADQKNQAAQSLTELNGKVAILKDQTSDVTVKAP 329

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKG 345
            +GT+  + S    +Y      L +I P   H K   +   V+P +I  VK+G
Sbjct: 330 TSGTLHIDASLQGKHYVPSGTTLAEIYPVLKHQKQIKLTLAVSPTEITSVKQG 382


>gi|222087170|ref|YP_002545705.1| multidrug resistance efflux protein [Agrobacterium radiobacter K84]
 gi|221724618|gb|ACM27774.1| multidrug resistance efflux protein [Agrobacterium radiobacter K84]
          Length = 406

 Score = 39.7 bits (91), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 12/114 (10%)

Query: 265 DLEQNQRTFADEMSKLTILEKTREQK------TILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           +L Q QRT A+  S +  LE  R++       T+L      +V N+S    +     Q L
Sbjct: 240 NLLQAQRTQAE--STIKGLEAARDKAARDLSFTVLKAPYDGVVGNRSVQEGDLVSPGQKL 297

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           M IVP  +L YI A     QIQH+  G    V    Y+D         +E I P
Sbjct: 298 MAIVPTRQL-YIDANFKETQIQHLVPGSKVNVHVDAYSD---HPIVGTVESISP 347


>gi|253689432|ref|YP_003018622.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756010|gb|ACT14086.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 453

 Score = 39.7 bits (91), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 81/442 (18%), Positives = 176/442 (39%), Gaps = 47/442 (10%)

Query: 7   KNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  + P S+ R TL +I    +  I W+ L  I+      G+ +    + +I++   G
Sbjct: 30  RAMAEDSPRSI-RFTLWAIGAFFLFFILWAGLADIDEVTRGDGKAIPSSRLQKIQNLEGG 88

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I+ +  +  G  +  G PLL  +D      +   +     L   I+   +    +N++  
Sbjct: 89  IVTEVFIHEGQVVNAGDPLLRLDDTRFASNVGETEADRLALLSRIERLNAE---INDREL 145

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           VL +   ++  ++     + +++  +  +  +S +   L  +   +R      +   N  
Sbjct: 146 VLSEEITTQAPKIAAGEKELYNSRRQQLHNEVSGLEEQLIQRRQELRDFSAKEIQFRNSL 205

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL----------RENIH 235
            LL       Q+++ M + L  + A+S+ ++ +  R   ++  +L             I 
Sbjct: 206 GLL-------QQEIKMSEPLIAEGAISKVEVLRLRRAEVETRGQLDSIKLSIPRAESAIK 258

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE--QKTIL 293
           E +N +      Y    L   +  +     +E   +   D +++  ++   R   Q+ ++
Sbjct: 259 ESENKIEETRSRYKSEALSQLSEAQTNLNKIEATGKALEDRVNRTLVVSPVRGIVQQVLV 318

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           + I G I            Q    L++IVP      + A++ P+ I  +  G  A ++  
Sbjct: 319 NTIGGVI------------QPGSDLVEIVPLDDKLLVEARIRPQDIAFLHPGQDAVIKLT 366

Query: 354 HYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGF 409
            Y        K  +E+I P  ++ ++ N     +Y + L+ TD   L  +D  + +  G 
Sbjct: 367 AYDYTIYGGLKGQLEQISPDTVTDKEGN----SFYIIRLR-TDKNYLGSADKPLLIIPGM 421

Query: 410 PAEV-LFTAKNTTLAQEIIHPI 430
            A V + T K T L+  ++ PI
Sbjct: 422 VASVDIITGKKTILSY-LLKPI 442


>gi|238764500|ref|ZP_04625448.1| HlyD family secretion protein [Yersinia kristensenii ATCC 33638]
 gi|238697312|gb|EEP90081.1| HlyD family secretion protein [Yersinia kristensenii ATCC 33638]
          Length = 147

 Score = 39.7 bits (91), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 5   MWKNLKRNHPA-------SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVV 57
           + KN+ +N P         L    LL I G IG + W+ L P++  ++  G I+  +N  
Sbjct: 9   LAKNMNQNPPPLQVNSGRYLSLGGLLVIGGFIGSLLWAGLAPLDKGIAVMGHIVVAENRK 68

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
            ++    G I++  +  G  + +G  L+T +D
Sbjct: 69  LVQPLQGGRIQQLHIAEGDDVTEGQLLITLDD 100


>gi|312960980|ref|ZP_07775485.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
 gi|311284638|gb|EFQ63214.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
          Length = 429

 Score = 39.7 bits (91), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 75/424 (17%), Positives = 155/424 (36%), Gaps = 34/424 (8%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEIL--NEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           L+++G  G   W+ L P++  +   G ++   +   V+  SP  G++ +  V  G ++ Q
Sbjct: 21  LTVVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTLSP--GVVSRILVREGERVKQ 78

Query: 81  GTPLLTFEDIET-TDLIDLKK------VSIKNLRCHIDTEKSA---LDFLNNKYDVLEKA 130
           G PL   +  +   D+  L+        S+   +   D +       +   N    L   
Sbjct: 79  GQPLFRLDQTQNQADVQSLQAQYRMAWASVARWQSERDNQAGVTFPAELSANPDPALALV 138

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            E  + QL        S+  + F    + +  ++     ++  +   R DL  ++  LR 
Sbjct: 139 LEG-QRQLF-------SSRREAFAREQAGIRANIDGASAQLNGMRRARSDLTAQAQSLR- 189

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                   L  ++ L +   + +N L + +R + +   +L +N  E   + + I E   +
Sbjct: 190 ------DQLNNLQPLADNGYIPRNRLMEYQRQLSQVQQDLAQNTGESGRVEQGILESRLK 243

Query: 251 ANLEFANYLKEISRDLEQNQ-RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                  Y KE+   L   Q R+   E  +LT      +   I +P  G  V     +  
Sbjct: 244 LQQHSEEYQKEVRSQLADAQLRSLTLEQ-QLTSAGFDLQHSEINAPADGIAVNLGVHTEG 302

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              +  + L++IVP      +   +    +  V       + F  +   R  +    +  
Sbjct: 303 AVVRAGETLLEIVPQGTRLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGEVSL 362

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           I     Q  +      YY +   +++ A    + + ++ G PAE+       +L   +  
Sbjct: 363 IS--ADQMLDEKTGAPYYVLRTTVSEAALEKLHGLVIKPGMPAEMFVRTGERSLLNYLFK 420

Query: 429 PITD 432
           P+ D
Sbjct: 421 PLLD 424


>gi|218679900|ref|ZP_03527797.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CIAT 894]
          Length = 295

 Score = 39.7 bits (91), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 82/224 (36%), Gaps = 43/224 (19%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTF-ADEMSKLTIL 283
           S ++  + + EQ   L        E NL  A    E+ +R+ ++  RTF +D++ +L   
Sbjct: 47  SVIDATQTLKEQATQL-----AVQEGNLADAAAGIEVFAREKDKLTRTFLSDQLGRLGDA 101

Query: 284 EK--------------TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           E+               REQ T+ SPI GT+  +   S        Q +M++VP      
Sbjct: 102 ERRVEELEQRLAKARNVREQMTLRSPIDGTVQASSITSVGQVVTVGQDVMRVVPEGSALE 161

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---------------DPII 374
           +      K I  +K G  A V+   +   R     A + KI               DP  
Sbjct: 162 LEVYALNKDIGFIKVGQEAVVKLEAFPFTRYGTIPAHVTKIAADAIPEPDAARREGDPAA 221

Query: 375 SQQDNNLQTQEYYE-------VILKITDLAFSDNNIELRNGFPA 411
            Q +      E  +       + L+   ++    N+EL  G  A
Sbjct: 222 RQAETTFGGAERMQNLVFPVTLSLETRQISADGRNVELSAGMAA 265


>gi|154174251|ref|YP_001408653.1| type I secretion membrane fusion protein, HlyD [Campylobacter
           curvus 525.92]
 gi|112803936|gb|EAU01280.1| type I secretion membrane fusion protein, HlyD [Campylobacter
           curvus 525.92]
          Length = 487

 Score = 39.7 bits (91), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 91/441 (20%), Positives = 171/441 (38%), Gaps = 58/441 (13%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P++ K++       I  LI W+    I+     SG+I+       I++   GI+    V+
Sbjct: 70  PSTSKKILYALSFTIFWLIVWASWAQIDEITRGSGKIIPSGKNQAIQNLEGGIVDAIFVK 129

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +   +L  ++              KN        K  LD L  K+  L+     
Sbjct: 130 EGDEVKKDQIILRIDN--------------KNFSSSYGESKLRLDELEAKFMRLDAEAND 175

Query: 134 REEQLLDFLGKYHSTCSKVFNYGIS----------SVYRSLKMKLTRMRSIYLNRLDLEN 183
           +E     +  K  +  +K   Y IS             R L  ++T+ +S      +L+N
Sbjct: 176 KE---FVYDEKRDANNTKAIKYEISLHNSNLEHLDEQIRILTEQITQRQS---ELTELKN 229

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K S  +   +   K+  +M+ +F+K  VS+ +  Q +R V     EL  ++     +   
Sbjct: 230 KISQTQNSYNLMLKEKAIMEPIFKKGLVSEVEYIQLQRRVNDLKGELDASVLALPRVEST 289

Query: 244 INELYD---EANLEFANYLK--------EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           I E+ +   EA L F N  K        EI+R + ++Q + +D +          E+  +
Sbjct: 290 IKEVQNKIAEAKLAFKNNAKKELNEVSAEIAR-ISESQISLSDRV----------ERTYV 338

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ G +      + S   +  + + +IVP         KV P  +  ++ G    V+F
Sbjct: 339 RSPVNGIVSKMMVHTISGVIKPGENIAEIVPLEDKLVAEVKVKPADVAFLRPGLDTIVKF 398

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGF 409
             Y D     +  +  K+  I +  + N +T E Y ++   TD   L   +  + ++ G 
Sbjct: 399 TAY-DF--SIYGGLKGKVTQISADTETNEKTGESYYLVRIETDKNYLGSEEKPLRIKVGM 455

Query: 410 PAEVLFTAKNTTLAQEIIHPI 430
                      T+   ++ PI
Sbjct: 456 IVSADIITGKKTILDYLLKPI 476


>gi|158321637|ref|YP_001514144.1| RND family efflux transporter MFP subunit [Alkaliphilus oremlandii
           OhILAs]
 gi|158141836|gb|ABW20148.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
           oremlandii OhILAs]
          Length = 409

 Score = 39.7 bits (91), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 33/193 (17%)

Query: 221 RIVYKSTLELRE---NIHEQKNMLRHINELYDEA---NLEF----------ANYLKEISR 264
           R + K  LE++E    I   + ++R+   LYD     N E+           N L+++  
Sbjct: 119 RAIEKLDLEIKEIEKRIRTAEEVVRNKKVLYDAGAISNEEYQNALRSLETEGNNLEKVKL 178

Query: 265 DLEQNQRTFAD--------EMSKLTI----LEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           DLE  ++  ++        ++ +L +    LEK+ E  TI++PI GT+V ++     NY 
Sbjct: 179 DLELMKKPVSENTVIQYEAQLKQLDLQRQALEKSGENFTIVAPIDGTVV-SKLVEKGNYL 237

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           Q   P+M+I   ++L YI + +    I  V +     +      D+  +  + ++EKI P
Sbjct: 238 QPGTPVMEIGNMNQL-YIESDILVGDIAKVHENAKVVI---SNKDLGIENLEGVVEKIHP 293

Query: 373 IISQQDNNLQTQE 385
               + +NL  Q+
Sbjct: 294 NAFSKISNLGLQQ 306


>gi|257067262|ref|YP_003153517.1| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide
          acyltransferase component [Brachybacterium faecium DSM
          4810]
 gi|256558080|gb|ACU83927.1| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide
          acyltransferase component [Brachybacterium faecium DSM
          4810]
          Length = 447

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%)

Query: 31 LITWSILLPIEISVSSS-GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
          +++W + +  E++++ +  E+     +VE+ SP +G I+    E G  +  G PL+ FE+
Sbjct: 18 IVSWHVAVGDEVTLNQALAEVETAKALVELPSPRAGRIRALHAEEGETLAVGAPLVGFEE 77

Query: 90 I 90
          I
Sbjct: 78 I 78


>gi|126217844|gb|ABN88624.1| MovD [Moraxella ovis]
          Length = 475

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 83/379 (21%), Positives = 151/379 (39%), Gaps = 98/379 (25%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           +I ++  + WS +  I+I  ++SG+I +      I+S  + I+K   V +G  I QG  L
Sbjct: 63  MIFVLFALLWSWVGQIDIVATASGKISSGSRSKTIQSLETAIVKAVHVRDGQNIQQGEVL 122

Query: 85  LTFEDIET-TDLID----LKKVSIKNLRCHIDTEKSALDF-LNNKYDV----------LE 128
           +    + + +D+      L+   +  LR  ++   SAL+  +N K D+          LE
Sbjct: 123 VDLVAVGSDSDVAQSEKALQAAQLSKLR--LEAILSALNHRINPKIDLAYAKSLNISELE 180

Query: 129 ------------KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                       +A+ +++EQL   L  + +              RS + KL  + +I  
Sbjct: 181 INEAQTLAQNQYQAWLAQDEQLKLILKGHQAELQSA---------RSQEQKLVAVGAIER 231

Query: 177 NRLD----------------LENKSSLLRALLSSHQKDLTMMKNLFEK--NAVSQNDLNQ 218
            + D                LE +S LL     S+Q DL   ++  +K   A+ Q +   
Sbjct: 232 QKTDDYRKLKAENFISEHAYLEQESKLL-----SNQNDLQSTRSQIQKIQAAIMQAE--- 283

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           Q R++Y   L+ R+ +   +     IN+   +AN              +Q Q+       
Sbjct: 284 QNRMLYTQNLK-RDTLESLRQTNEQINQYTGQAN------------KAKQRQKLL----- 325

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                       +I SP++GT+    +++     Q +Q +M +VP+     +   V  K 
Sbjct: 326 ------------SIKSPVSGTVQELATYTLGGVVQAAQKIMVVVPNDNQVEVEVLVLNKD 373

Query: 339 IQHVKKGYTATVR---FPH 354
           I  VK G    V+   FP+
Sbjct: 374 IGFVKVGQDVIVKVESFPY 392


>gi|294010596|ref|YP_003544056.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292673926|dbj|BAI95444.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 452

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 74/435 (17%), Positives = 171/435 (39%), Gaps = 32/435 (7%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +++  +++I+   G + W+    ++ +  ++G ++       ++    G++    V  G 
Sbjct: 26  IRQGLIIAILFFAGFLGWTAFSRLDAAAYATGRLIVAGQRQSVQHRDGGVVGSIHVREGQ 85

Query: 77  QILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           ++ +G  L+T    E       +  + + +   R  ++ E+  L  +N   + L      
Sbjct: 86  RVERGRLLMTLAAAEVQAQERALASQAIRLLAQRARLEAEQMGLSQINEPQEFLSLQPRD 145

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R +  L    +     ++V    +++   +L+ ++  ++S    R   E   S  R  L 
Sbjct: 146 RADAALAMKLQRAELQARVAV--LAAQRDALQQQV--VQSGEQGRGYNEQAVST-REQLR 200

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN-----IHEQKNMLRHINELY 248
              + +  ++ + EK  VS+  + + ER+  +++LE +       + + +  +R  NE+ 
Sbjct: 201 LIDEQIAALRPVAEKGFVSKTRMRELERM--RASLEGQRGQYNASVAQTRGAVRE-NEIQ 257

Query: 249 D-EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             EA   F        RD+E       D + K         +  I +P  G IV    F+
Sbjct: 258 VLEAERSFRERTASELRDVELR---LGDVLPKWRAARDQLARTEIRAPATGAIVGLTVFT 314

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                   Q LM I+P  +   I+ +++P     ++ G    V+F    +      +  +
Sbjct: 315 PGGVISPGQKLMDIIPERQPLRIQMQISPDDADDLQMGQKLLVKFSGLHERTLPNLEGEL 374

Query: 368 EKI--DPIISQQDNNLQTQEYY--EVILKITDLAF----SDNNIELRNGFPAEVLFTAKN 419
            ++  D  I ++      Q Y+  E  + ++ L         +  LR G P +VL   + 
Sbjct: 375 TRLSADSFIDERSG----QSYFTGEAAVPLSQLQLIRKVRGEDFALRAGMPVQVLIPLRK 430

Query: 420 TTLAQEIIHPITDNW 434
            +     + P+  ++
Sbjct: 431 RSALDYALEPLIGSF 445


>gi|323494274|ref|ZP_08099386.1| HlyD family secretion protein [Vibrio brasiliensis LMG 20546]
 gi|323311437|gb|EGA64589.1| HlyD family secretion protein [Vibrio brasiliensis LMG 20546]
          Length = 463

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 70/158 (44%), Gaps = 9/158 (5%)

Query: 277 MSKLTILEKTREQKTIL-SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
           M++ T+  + R  +TI+ SP+ GT+      +     Q    +++IVP      + AK+ 
Sbjct: 301 MTESTVGLEDRVNRTIVTSPVTGTVKTLNVNTVGGVIQPGMDIVEIVPSEDTLLVEAKIA 360

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKI 393
           P+ I  ++      V+F  Y   +    +  +E I  D    ++ N+     +Y V ++ 
Sbjct: 361 PQDIAFLRPELHTIVKFSAYDFTKYGGLEGTLEHISADTTTDEEGNS-----FYLVRVRT 415

Query: 394 TDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            + +   DN++ +  G  A V       T+ + ++ PI
Sbjct: 416 KETSLDKDNSLPIIPGMTASVDIITGKRTILEYLLKPI 453


>gi|312792541|ref|YP_004025464.1| secretion protein hlyd family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179681|gb|ADQ39851.1| secretion protein HlyD family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 466

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 69/155 (44%), Gaps = 32/155 (20%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           IIGL+ WSI+  I+I+V   G I   ++   I S   G +K+  V+ G  + +G  L   
Sbjct: 37  IIGLVLWSIVGEIDINVKVQGIIRPWEDEARIISYVGGKVKEIFVKEGEYVKKGEVLFKI 96

Query: 88  EDIETTDLIDL---------KKVS-IKNLRCHIDTEKSALDFLNNKYDV----------- 126
           +D E     DL         KKVS +K LR  I+  +S    L NK +V           
Sbjct: 97  DDEEYVKKRDLLKQQLREYEKKVSDLKELRKSIEKGES----LRNKNNVYYLRYLSYSYE 152

Query: 127 ---LEKAFES----REEQLLDFLGKYHSTCSKVFN 154
              L+KA E     RE  ++DF  +  S   K+ N
Sbjct: 153 VNKLKKAAEEERVQREYSIMDFKKQIESLDEKIKN 187


>gi|54294440|ref|YP_126855.1| secretion system protein D [Legionella pneumophila str. Lens]
 gi|53754272|emb|CAH15749.1| Legionella secretion system protein D [Legionella pneumophila str.
           Lens]
          Length = 378

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 110/262 (41%), Gaps = 33/262 (12%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           S+Y +R+   N+   L   L   QK+L + + L +  +VS+ ++ + ER V     E+R 
Sbjct: 135 SLYESRMRELNQ---LEKSLELAQKELNLTRPLLKGGSVSEVEVIRLERTVS----EIRG 187

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           NI + K+    ++ L ++A  E    ++    D ++  RT                  T+
Sbjct: 188 NIEKFKS--EELDRL-NKARSELFALIEANKADKDRLTRT------------------TV 226

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ G +   ++ +     Q    L++IVP      I AK+ P  I  +  G  A V+ 
Sbjct: 227 RSPVYGIVKQIKTKTIGGVVQPGNDLLEIVPLDDTLLIEAKIRPSDIGFIHPGQKAMVKI 286

Query: 353 PHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNG 408
             Y        + ++E I  D II ++ +  + + YY V ++     L      + +  G
Sbjct: 287 TAYDFSIYGGLEGVVEHISADTIIDEKTDK-KEESYYIVKVRTEKNYLGTEKKPLPIIPG 345

Query: 409 FPAEVLFTAKNTTLAQEIIHPI 430
             A V       ++ Q ++ PI
Sbjct: 346 MQATVDILTGQKSVLQYLLKPI 367


>gi|322833441|ref|YP_004213468.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
 gi|321168642|gb|ADW74341.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
          Length = 428

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 84/401 (20%), Positives = 154/401 (38%), Gaps = 57/401 (14%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++ SGEI+ + + + + SP  G++ K  V+ G  + +G PL    +I+ + +     VS 
Sbjct: 54  INVSGEIITQPHSINLFSPEQGVVTKLYVDTGKPVKKGQPLY---EIDVSRVTQAGNVST 110

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             L   I  ++  +D +  + +  ++      +Q LD   K H            S+  S
Sbjct: 111 TTLAA-IKKQREQIDSIIAQLEHNKQETLQNLQQQLDQYQKAHEVS--------QSMVDS 161

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            +  L  M+    N    + K      L+++ Q  L   + LF +   S   LN Q    
Sbjct: 162 AQEGLDAMKKSMQNYGAYQKK-----GLINTDQ--LNNQRYLFYQQQTSFQSLNTQA--- 211

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                     I E   +    +EL   A  EF N + +        +R  A   +K ++L
Sbjct: 212 ----------IQEALQITNLRSELVTRA-AEFDNQISQYGYQRNDLERQLAQADAKGSLL 260

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ-IQHV 342
                   I +P +G I  + S +          L ++VP S   +      P + + +V
Sbjct: 261 --------ITAPTSGKIS-SLSVTPGQMVNAGDSLAQLVPASNSPFFLVAWLPNESVPYV 311

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQDNNLQTQ----------EYYEVI 390
           K G    +R+  Y   +  +F   +E I   P+  Q+ N+  +            YY+VI
Sbjct: 312 KAGEHINIRYEAYPFEKYGQFPGTVESISSAPVSEQELNSYASAPRTANGTIRGPYYKVI 371

Query: 391 LKITDLA--FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           + +   A  +    + L +G  AE     +   L Q ++ P
Sbjct: 372 VSLDKKAMNWHGETLNLSSGMKAESTLFLEKRPLYQWMLSP 412


>gi|300312188|ref|YP_003776280.1| hemolysin secretion-related transmembrane protein [Herbaspirillum
           seropedicae SmR1]
 gi|300074973|gb|ADJ64372.1| hemolysin secretion-related transmembrane protein [Herbaspirillum
           seropedicae SmR1]
          Length = 447

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 81/415 (19%), Positives = 163/415 (39%), Gaps = 41/415 (9%)

Query: 19  RMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R T   ++G +I  + WS+L  I+I VS++G+++       I S     ++   V  G  
Sbjct: 60  RWTARLLVGMVIFALLWSLLGRIDIVVSANGKVIPSARTKTIASVDVSAVRAILVSEGQL 119

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+  +   +    D    ++   R      ++ ++ + N           R  +
Sbjct: 120 VKAGEVLIELDSSSSDAERDKAADAVAQARLQAARAQAMMEAIQNL----------RTPE 169

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L    G   +    V +  ++  Y+  + +L R          L+++ S   A L    +
Sbjct: 170 LAQVPGVAQAQWEAVRSQLVAQ-YQDFRARLGR----------LDDEISRYGAALKLATQ 218

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             +  + L   + VS++   ++E+       +L +  +++  ++    +   ++ +E A+
Sbjct: 219 RASDYQTLVADHTVSRHAWLEKEQARVDLQGQLDDARNQRATLVAQTRKDAHDSRIE-AD 277

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
              E S   +Q+QR  ADE SKL  L         ++P+ GT+      +       +QP
Sbjct: 278 KTIEAS---QQDQRR-ADEHSKLLKL---------VAPVTGTVQQLTVHTIGGVVPAAQP 324

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIIS 375
           LM+IVP      + A +  K +  V+ G  A V+   +   +     A +  I  D I  
Sbjct: 325 LMQIVPQDSQIEVEAMLENKDVGFVEIGQAAEVKIDAFDYTKYGTLPARVVHISRDAI-- 382

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            QD          ++L  + L      ++L  G  A V     N  + +  + P+
Sbjct: 383 -QDEKKGLLYSARIVLDQSSLIVDGRKVQLSAGMAANVEIKTGNRRVIEYALSPL 436


>gi|296162580|ref|ZP_06845369.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           sp. Ch1-1]
 gi|295887204|gb|EFG67033.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           sp. Ch1-1]
          Length = 475

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 145/366 (39%), Gaps = 54/366 (14%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           HPA    M +L I+ ++ L+   I+  ++I V++ G+++  + V  I+   +G++++  V
Sbjct: 55  HPAPRWAMRILVILAMLILLI-GIVGRLDIVVTAKGKLVPNERVKIIQPAITGVVRQILV 113

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            +G ++     LL  +  +     D  + S       ID   ++         + E    
Sbjct: 114 RDGQRVNAQQALLVLDATQAAADADKARSS------RIDAALAS----ARATALFEAVKT 163

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR----LDLENKSSLL 188
            R   L    G      S+  ++    +YR    KL   ++  L R         + + L
Sbjct: 164 GRVPALRTVDGASSEQQSQAQHFA-EGLYREYADKLMASQAELLKREAELATTRQEVAKL 222

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           RA     +++    + L     V+Q+D   +E    +S LE    +  Q++  R      
Sbjct: 223 RATAPLARREANDYRYLARDQYVAQHDYLGKE----QSALEQEHELAAQQSRAR------ 272

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ-----------------KT 291
                E A  + +    + Q    FA E  +L +L+K R+Q                  T
Sbjct: 273 -----ELAAAIVQQRAAIGQTTSQFARE--QLDVLDKARQQFAQYRADETKAVTRQSLMT 325

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P++GT+    + +       +Q +M+IVP   +  + A +  K +  V  G  A V+
Sbjct: 326 LYAPVSGTVEQLAAHTPGGVVTTAQSIMEIVPDDAVE-VEASIENKDVGFVNVGQDAIVK 384

Query: 352 ---FPH 354
              FP+
Sbjct: 385 IEAFPY 390


>gi|114776635|ref|ZP_01451678.1| Secretion protein HlyD [Mariprofundus ferrooxydans PV-1]
 gi|114552721|gb|EAU55152.1| Secretion protein HlyD [Mariprofundus ferrooxydans PV-1]
          Length = 383

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 11/108 (10%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           T+ +PIAGT++ +  F           LM +V  + + ++ AKV   Q+  ++ G  A +
Sbjct: 195 TLHAPIAGTVIQD-DFRIGQQVAAGTLLMTVVDETTV-WVEAKVPESQLFDIRAGQAAII 252

Query: 351 RFPHYADIREKKFKAIIEKIDPI---------ISQQDNNLQTQEYYEV 389
           R   +ADI   K   I  ++DPI         +   D++LQ   + +V
Sbjct: 253 RSKTHADIFYGKVANIHHQLDPITRTGGVRLEVKNPDDSLQPGMFVQV 300


>gi|254672774|emb|CBA06832.1| hemolysin secretion protein D [Neisseria meningitidis alpha275]
          Length = 475

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 73/352 (20%), Positives = 132/352 (37%), Gaps = 62/352 (17%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET- 92
           WS    I+I  ++SG+ ++      I+   + ++K   V +G  + QG  L   E + T 
Sbjct: 72  WSWFGKIDIVAAASGKTVSGGRSKTIQPLETAVVKAVHVRDGQHVKQGETLAELEAVGTD 131

Query: 93  TDLID----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +D++     L+   +  LR                Y+ +  A ESR    +D        
Sbjct: 132 SDVVQSEQALQAAQLSKLR----------------YEAVLAALESRTVPHIDM------- 168

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++  + G+S         L + +       D +     L++ L  HQ +L   K   E+
Sbjct: 169 -AQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQ-----LQSALRGHQAELQSAKAQ-EQ 221

Query: 209 NAVSQNDLNQQERIVYK-----------STLELRE-------NIHEQKNMLRHINELYDE 250
             VS   + QQ+   Y+           + LE +        ++   +  +R I     +
Sbjct: 222 KLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQAAIAQ 281

Query: 251 ANLEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQ-KTILSPIAGTIVYNQS 305
           A        + + RD    L Q      D+    T   K R+Q  TI SP  GT+    +
Sbjct: 282 AEQSRVLNTQNLKRDTLDALRQANEQI-DQYRGQTDKAKQRQQLMTIQSPADGTVQELAT 340

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           ++     Q +Q +M + P      +   +  K I  V++G  A V+   FP+
Sbjct: 341 YTVGGVVQAAQKMMVVAPDDDKMDVEVLILNKDIGFVEQGQDAVVKIESFPY 392


>gi|254461443|ref|ZP_05074859.1| type I secretion membrane fusion protein, HlyD [Rhodobacterales
           bacterium HTCC2083]
 gi|206678032|gb|EDZ42519.1| type I secretion membrane fusion protein, HlyD [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 406

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 1/119 (0%)

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P++G I  ++ F+  +    + P+M ++P  +   + A++    I  V  G  A +RF 
Sbjct: 275 TPVSGVIYGSRVFAVQSVISPADPVMYVIPQDQPLIVAARIAAIHIDQVHVGQDAALRFS 334

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
            +      +    + KI   +   + + QT     ++ K  +LA  D  + L  G P E
Sbjct: 335 AFDQRPTPEIFGTVSKISADVYADEVSGQTYYLANLVPKSGELAKLDIQV-LLPGMPVE 392


>gi|150376532|ref|YP_001313128.1| HlyD family type I secretion membrane fusion protein [Sinorhizobium
           medicae WSM419]
 gi|150031079|gb|ABR63195.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium medicae WSM419]
          Length = 438

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/179 (20%), Positives = 71/179 (39%), Gaps = 3/179 (1%)

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           EIS++L   +   A+   + T       +  I +P++G I      + +      + LM 
Sbjct: 259 EISKELTDVEAKIAEYEERRTAAADQLRRLDITAPLSGRIYQLAIHTVNGVINPGETLML 318

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +VP      + AKV    I  ++ G +  +RF  +      + +A +  + P +   +  
Sbjct: 319 VVPEVDDLTVEAKVATHDIDQIRVGQSVEIRFSAFNQRTTPEVEAEVVTVAPDLVTDERT 378

Query: 381 LQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                YY + ++    + +    + L  G PAEV     + T+   +  P+TD     F
Sbjct: 379 --GASYYPLRIRPKTESLAKLKGLSLYPGMPAEVFIKIADRTVISYLTKPLTDQMRHAF 435


>gi|310687096|ref|YP_003943973.1| accessory protein [Lactobacillus casei]
 gi|308319973|gb|ADO27712.1| accessory protein [Lactobacillus casei]
          Length = 458

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 67/353 (18%), Positives = 148/353 (41%), Gaps = 35/353 (9%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
           +++ ++  + + +    E+++++SGE+      V ++S  +  I +  ++ G  + +G P
Sbjct: 28  AVMALVIALAFVLFAKREVTITTSGELTPVQKAVSVQSTTTSRIIENHLKEGRFVKKGDP 87

Query: 84  LLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           L+T+ D+     + + +   K L+     +D  K+ L    + ++  +  F  R+  L D
Sbjct: 88  LVTYHDVNNPTQLKVLETQTKQLQDQTAALDKYKTGLTSNQDTFN-QDDPFGYRQA-LQD 145

Query: 141 FLGK---YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +L +   Y     +V     S   ++ K+     +SI  +  ++    +LL A+   HQ 
Sbjct: 146 YLSQRRIYALGSQQVSGQQSSENSKTAKVGQLLQQSIASSNQNIAAYQALLTAI--QHQS 203

Query: 198 ---DLTMMKNLFEKNAVSQNDLNQQERIVYKSTL--ELRENIHEQKNMLRHI------NE 246
              D      L++       D+   +    K++   ++   +  +K+ L  +      NE
Sbjct: 204 GYNDSQPYSYLYKSFIAESKDMTGSDLDKVKTSYISQIDAKMDTEKSQLESLKLQQANNE 263

Query: 247 LYDEANLEF-----------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
             D +  +            A+ LK ++    Q  ++  +   K+ IL+      T+ +P
Sbjct: 264 ASDTSQQQLAENEQKMAALQASQLKSVADQKNQAAQSLTELNGKVAILKDQTSDVTVKAP 323

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKG 345
            +GT+  + S    +Y      L +I P   H K   +   V+P +I  VK+G
Sbjct: 324 TSGTLHIDASLQGKHYVPSGTTLAEIYPVLKHQKQIKLTLAVSPTEITSVKQG 376


>gi|251788706|ref|YP_003003427.1| biotin/lipoyl attachment domain-containing protein [Dickeya zeae
           Ech1591]
 gi|247537327|gb|ACT05948.1| biotin/lipoyl attachment domain-containing protein [Dickeya zeae
           Ech1591]
          Length = 274

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 9/143 (6%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I+SPI G I +    ++S   +  + LM+I P      I A+V  + I  ++ G  A + 
Sbjct: 126 IVSPIRGIIKHILVDTNSEQIRPGRTLMEITPLDDTLLIEAQVRLQDIAFLRPGQEAMMA 185

Query: 352 FPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRN 407
           F  Y      + K  IE+I  D +  Q  N+     +Y V L+     L   D  + + +
Sbjct: 186 FTTYDYTIFGRLKGYIEQIGQDMVTDQTGNS-----FYLVQLRTEKNYLGTIDKPLLILS 240

Query: 408 GFPAEVLFTAKNTTLAQEIIHPI 430
           G PA V       TL   ++ PI
Sbjct: 241 GMPARVDIITGRKTLLSYLLKPI 263


>gi|114762696|ref|ZP_01442130.1| HlyD family secretion protein [Pelagibaca bermudensis HTCC2601]
 gi|114544606|gb|EAU47612.1| HlyD family secretion protein [Roseovarius sp. HTCC2601]
          Length = 431

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 47/246 (19%), Positives = 103/246 (41%), Gaps = 9/246 (3%)

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+  ++  ++ ++L  +N  +Q   ++Q + +    L  +E   E++   ++I EL  EA
Sbjct: 183 LAMLERSQSVTEDLRSRNLATQQQADEQMQRLDGLRLRQQELRGERERATQNIEEL--EA 240

Query: 252 NLEFANY--LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            L   +   + E    + + Q       ++   LE+   +  I +P+AG +      S+ 
Sbjct: 241 TLRRIDLDAVAEARSRIAEAQAQLRGLKAREAALEQEVVEVDIRAPVAGFVQSLPDESTG 300

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           +       +  IVP S       ++ P+ I  V++     ++   Y   R    +  + +
Sbjct: 301 DVIDPGGVVATIVPGSGELRFAGRLAPRDIGFVRQDQPVRLKIDSYDFSRYGALEGRVVE 360

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEII 427
           I P  +    + + + +YEV++ I    F  +D+ ++L  G   E        T+ Q + 
Sbjct: 361 ISPTST---VDQRGESFYEVLVGIEQTFFRNADDGLDLMPGMTGEADIVTGAKTVFQYVW 417

Query: 428 HPITDN 433
            P+  N
Sbjct: 418 KPVYTN 423


>gi|50122191|ref|YP_051358.1| HlyD family secretion protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612717|emb|CAG76167.1| HlyD family secretion protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 453

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 96/448 (21%), Positives = 181/448 (40%), Gaps = 59/448 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  + P S+ R TL +I    +  I W+ L  I+      G+ +    + +I++   G
Sbjct: 30  RAMAEDSPRSI-RFTLWAIGAFFLFFILWAGLANIDEVTRGDGKAIPSSRLQKIQNLEGG 88

Query: 66  IIKKFQVENGSQILQGTPLLTFED------IETTDLIDLKKVS-IKNLRCHIDTEKSALD 118
           I+ +  +  G  +  G PLL  +D      +  T+   L  +S I+ L   I  ++    
Sbjct: 89  IVTEVFIREGQVVNAGDPLLRLDDTRFASNVGETEADRLALLSRIERLTAEISGQEL--- 145

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L+ +         + E++L      Y+S   ++ N  IS +   L  +   +R      
Sbjct: 146 VLSEEITTQAPKVAAGEKEL------YNSRRQQLHNE-ISGLEEQLIQRRQELRDFSAKE 198

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           +   N   LL       Q+++ M + L  + A+S+ ++           L LR    E +
Sbjct: 199 IQFRNSLGLL-------QQEIKMSEPLIAEGAISKVEV-----------LRLRRAEVETR 240

Query: 239 NMLRHIN---ELYDEANLEFANYLKEI-SRDLEQNQRTFADEMSKLTILEKT------RE 288
             L  I       + A  E  N ++E  SR   +     ++  + L  +E T      R 
Sbjct: 241 GQLDSIKLSIPRAESATKESENKIEETRSRYRSEALSQLSEAQTNLNKIEATGKALEDRV 300

Query: 289 QKT-ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +T ++SP+ G +      +     Q    L++IVP      + AK+ P+ I  +  G  
Sbjct: 301 NRTLVVSPVRGIVQQVLVNTIGGVIQPGSDLVEIVPLDDKLLVEAKIRPQDIAFLHPGQD 360

Query: 348 ATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITD---LAFSDNNI 403
           A ++   Y        K  +E+I P  ++ ++ N     +Y + L+ TD   L  +D  +
Sbjct: 361 AIIKLTAYDYTIYGGLKGQLEQISPDTVTDKEGN----SFYIIRLR-TDKNYLGSADKPL 415

Query: 404 ELRNGFPAEV-LFTAKNTTLAQEIIHPI 430
            +  G  A V + T K T L+  ++ PI
Sbjct: 416 LIIPGMVASVDIITGKKTILSY-LLKPI 442


>gi|159029160|emb|CAO87520.1| hlyD [Microcystis aeruginosa PCC 7806]
          Length = 589

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/68 (25%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           TL+S+      + WS    IE  V + G++  +  V E+++P +G++++ +V++G ++ +
Sbjct: 65  TLMSVT--TAALIWSAFAKIEQVVGAQGQLKPQGKVQEVQAPVNGVVQEVKVKDGDRVNK 122

Query: 81  GTPLLTFE 88
           G  L+  +
Sbjct: 123 GDVLVLMD 130


>gi|158424829|ref|YP_001526121.1| putative membrane-fusion protein [Azorhizobium caulinodans ORS 571]
 gi|158331718|dbj|BAF89203.1| putative membrane-fusion protein [Azorhizobium caulinodans ORS 571]
          Length = 443

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 5/112 (4%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++G + WSIL    I V+ +G +     V+ + SP +G +   +V  G+Q+  G  +   
Sbjct: 59  VLGGLAWSILGTAPIKVAGTGVLQGTGGVLLVSSPGNGPVSDLKVAVGAQVHAGEIVAVL 118

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSAL-DFLNNKYDVLEKAFESREEQL 138
            D     ++D +  +I      +  E+  L  F   + +V  +A   R+E L
Sbjct: 119 SD----PVLDARAQTITARLAQLQEEQRKLAAFQAREKEVRARADAQRKEAL 166


>gi|238796516|ref|ZP_04640024.1| Hemolysin transport protein [Yersinia mollaretii ATCC 43969]
 gi|238719721|gb|EEQ11529.1| Hemolysin transport protein [Yersinia mollaretii ATCC 43969]
          Length = 461

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 68/329 (20%), Positives = 139/329 (42%), Gaps = 23/329 (6%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WSI+  ++I  S++G+++  ++   I+   SG++    V +G ++  G  L+    I   
Sbjct: 65  WSIVGKLDIHASANGKVIVSEHSKVIQPLESGVVAAINVRDGDRVDVGQVLIELNPIG-- 122

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             ID +  +I     H   E  A   +    D  +  F +  +   D L    +   K +
Sbjct: 123 --IDAELENINKQLIHRRLE--AARMVAMLTDDPQTHFAAPLDAPDDLLMMTQALLLKEY 178

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +   + + R    +      I     ++ N+  L++ +   HQ+ L  ++ L +  ++++
Sbjct: 179 DEVNAELSRMESEQAVNQAHIQAGIANIANQKVLMKNI---HQR-LQALRTLAKSKSIAE 234

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L  QER    +T E     H ++ +L        +  L   +YL E  R  ++     
Sbjct: 235 IELLVQEREWLNATAEA-SRFHSEQAILEAKTLNLTQTRL---HYLAEKKRSYQERLNKA 290

Query: 274 ADEMSKLT-----ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            + +++L      ++EK R+Q ++ +P+AG I      +       +QPLM +VP +   
Sbjct: 291 HEVINQLQQEQIKLMEKQRQQ-SLRAPVAGVIQQLAVHTLGGVVTAAQPLMVLVPENHQL 349

Query: 329 YIRAKVTPKQIQHVKKGYTATVR---FPH 354
            +   V  K +  V  G    V+   FP+
Sbjct: 350 ELDVMVLNKDVGFVLPGQAVEVKVDSFPY 378


>gi|42779249|ref|NP_976496.1| hypothetical protein BCE_0168 [Bacillus cereus ATCC 10987]
 gi|42735164|gb|AAS39104.1| hypothetical protein BCE_0168 [Bacillus cereus ATCC 10987]
          Length = 437

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 65/363 (17%), Positives = 158/363 (43%), Gaps = 35/363 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+R  P  +  + +  ++ +   + W+ +  I+I    +  I  + +V   ++   G+I 
Sbjct: 17  LERKPPRFIAGLIVFLLMSLFVFLIWAYVSKIDIVSKGTAMIQGKSDVSVSRTQIVGVID 76

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V+ G ++ +G  L+  ++ E TD    K+  +  +  H++ +K  L       + L+
Sbjct: 77  TVAVKPGDEVKKGNILIQLKNQELTD----KQSQMNQIVEHLEKQKGML-------EQLK 125

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           ++ +S +   LD + K      + ++    S+      K   +++I  +++  E +  +L
Sbjct: 126 ESIQSHKSSFLDDVDKKIREEYQAYDQRYQSIQNE---KDNEIKTIENSKISSE-QDEVL 181

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLELREN-----IHEQKNML 241
           + L++ ++ ++    ++ EK    +N L +Q++++   K  LE ++N     I ++K  L
Sbjct: 182 QGLIAENE-NIQREIDIIEKQKTKENILEEQKQVIDDKKGNLESQKNSVEKRIQQRKETL 240

Query: 242 RH----INELYDEANLEFANYLKEISRD--LEQNQRTFADEM------SKLTILEKTREQ 289
            H    ++   +   ++  + LK+   +  +  NQR  + E        +L  L    E 
Sbjct: 241 EHERTKVDVTKEGKQVQKKDALKQYKEESIISVNQRIQSLEQELFIKKQELDGLRHQNET 300

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I +   G + +       +     Q ++ I+P  +   +R  +  ++I+ +KKG    
Sbjct: 301 TIIKAEKDGIVQFPAILQQGDLINPGQEIVSIIPKEEQKKVRILLPAQEIKGIKKGDKVQ 360

Query: 350 VRF 352
             F
Sbjct: 361 YSF 363


>gi|289166230|ref|YP_003456368.1| HlyD family secretion protein [Legionella longbeachae NSW150]
 gi|288859403|emb|CBJ13340.1| putative HlyD family secretion protein [Legionella longbeachae
           NSW150]
          Length = 336

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 7/160 (4%)

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           K  + + + SP+ G I  N  +      + S+ L+ I+P +     R  +  K I  +KK
Sbjct: 177 KQSQSELVRSPVDGVIT-NIFYKQGQVVEASKILLHIIPDNSTLVARLYIPSKDIGFLKK 235

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPII---SQQDNNLQTQE-YYEVI--LKITDLAF 398
           G    +++  Y   R   +KA I +I+  +    ++D  +   E YY++   L+   +  
Sbjct: 236 GAQVIIKYDAYPSQRFGFYKAFIREINLTVLTDEKEDKPIHVGEPYYKIKAELETPYVNL 295

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                 L +G     + T +   + Q I  PI   +  +F
Sbjct: 296 YGKKENLSHGMTLTAVITGEKKKIWQWIFDPIYSYYGDVF 335


>gi|257454413|ref|ZP_05619675.1| macrolide-specific efflux protein MacA [Enhydrobacter aerosaccus
           SK60]
 gi|257448179|gb|EEV23160.1| macrolide-specific efflux protein MacA [Enhydrobacter aerosaccus
           SK60]
          Length = 436

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 45/208 (21%), Positives = 87/208 (41%), Gaps = 29/208 (13%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           T+  ++   R DL+ K     A L   Q +   +K+L   NA+S+ +L Q    V  +  
Sbjct: 126 TKQAALATARADLKGK----IATLQQSQTEYNRLKSLLAMNAISKQELEQAGTAVKTA-- 179

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             + N+   K  +        +AN+  +        D+   Q+T     + +   EK   
Sbjct: 180 --QANVDSAKEAIATA-----QANIASSQ------ADIVSAQQTIKKSQTDVNTAEKNLG 226

Query: 289 QKTILSPIAGTIVYNQSFSSSNY-AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
              I++P++GT++   +       A QS P +  +       ++AK++   + ++K G  
Sbjct: 227 YSQIVAPMSGTVISITTKQGQTVNANQSAPTIVTLADLSSVRVKAKISEADVVNLKVG-- 284

Query: 348 ATVRFPHYADI---REKKFKAIIEKIDP 372
                P Y +I    +KK++A +  I P
Sbjct: 285 ----LPVYFNIIGRPDKKYQATLSTIGP 308


>gi|300312743|ref|YP_003776835.1| membrane-fusion protein [Herbaspirillum seropedicae SmR1]
 gi|300075528|gb|ADJ64927.1| membrane-fusion protein [Herbaspirillum seropedicae SmR1]
          Length = 402

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 13/134 (9%)

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E  ++Q  I +P++GTIV   +      A   + LM+I   S++T ++  V  + +  ++
Sbjct: 200 EAVQKQTRIEAPVSGTIVTLNARPGQMVAANQEALMRIADLSRMT-VQVPVAEEDVTRLQ 258

Query: 344 KGYTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQE-YYEVILKITDLAFSDN 401
           KG TA    P Y   R   K + I+     ++   D+  Q ++ +Y V   +     ++ 
Sbjct: 259 KGMTAYFTTPGYPGKRWSGKLRQIM-----LLPTDDSGRQGKKAFYTVFFDV-----ANP 308

Query: 402 NIELRNGFPAEVLF 415
           + EL +G  A+V F
Sbjct: 309 SRELMSGMSADVYF 322


>gi|37525298|ref|NP_928642.1| RTX toxin ABC transporter protein (MFP) RtxD [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784725|emb|CAE13625.1| RTX toxin ABC transporter protein (MFP) RtxD [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 451

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 95/419 (22%), Positives = 171/419 (40%), Gaps = 46/419 (10%)

Query: 9   LKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L +  P+   R T +++ IGII  + W+ L  +++  +++G ++       I++     +
Sbjct: 29  LSQRPPSPFARYTAITLSIGIIMALLWAYLGKLDVQATATGRLIVSGRSQIIQAYEQSRV 88

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLID--LKKVSIKNLRCHIDTEKSALDFLNNKYD 125
               V+NG ++ +  PLLT   +     I   LK++     + H   EK        +Y 
Sbjct: 89  TAIHVQNGQRVEKDAPLLTLNTLGVNQDITRLLKQI---EYQAH---EKI-------RYQ 135

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENK 184
            L +  E  +++L   L     T     NY  S   R  +  +T +++ + +N    +++
Sbjct: 136 ALTEEQEPTKQELFQALPVSQQT-QVADNY--SREKREYEAVVTNLKAEMNVNLSSQQSR 192

Query: 185 SSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            S + AL    Q   + L   + L +K  +S+ +  +QE    K  LE  E +  Q+N  
Sbjct: 193 KSDINALTKLRQNISQRLKARQTLSQKQVISKVEYLEQE----KEFLET-ERLIAQQNAE 247

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS----KLTILE------KTREQ-K 290
            H+ +    +  E  N LK       Q +R + D+      +L +LE      + REQ +
Sbjct: 248 FHVLQSQYISLEERLNSLK------TQKEREWFDKRKQAEVQLVVLEQELAKAQVREQLE 301

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I SP+ GT+      +     Q +Q LM IVP   +     ++  K    V  G   T+
Sbjct: 302 VIRSPVTGTVQQLSVHTLGAVLQPAQNLMVIVPDDNVQLAEVQILNKDAGFVYSGQQVTI 361

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +   +   R       +  I    S  D  L      +V LK   +A  D  +E+  G 
Sbjct: 362 KVDAFPYTRYGTIDGELLSISR-DSTTDEQLGLVFPAQVSLKRNSIAIDDTQVEITPGM 419


>gi|300697817|ref|YP_003748478.1| hemolysin D [Ralstonia solanacearum CFBP2957]
 gi|299074541|emb|CBJ54092.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum CFBP2957]
          Length = 390

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 27/186 (14%)

Query: 273 FADEMSKLTILEKTRE------QKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVPHS 325
           +A  M+ L  L K RE      ++T+L+  A  IV +   S+          LM+IVP  
Sbjct: 214 YASTMADLGPLLKVREGRADLLRRTVLTSPARGIVKDIRVSTIGGVVGAGGVLMEIVPLD 273

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQT 383
               I A+++P+ I  +  G  ATV+   +         A +E+I P  I  Q D  +  
Sbjct: 274 DQLLIEARLSPRDIAFIHPGQEATVKITAFEPSIYGSLPAKVERISPDTIEDQVDRRV-- 331

Query: 384 QEYYEVILKITDLAFSDNNIELRNG-----FPAEV----LFTAKNTTLAQEIIHPITDNW 434
             YY  +  +T  A+    +E ++G      P  V    + T + T LA  +I P+    
Sbjct: 332 --YYYRVYALTQHAY----LETKDGKRHPILPGMVATTEIRTGRRTVLAY-LIKPLNRAA 384

Query: 435 PKIFER 440
             + ER
Sbjct: 385 EALRER 390


>gi|83745630|ref|ZP_00942688.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum UW551]
 gi|207739514|ref|YP_002257907.1| typeIsecretion system protein [Ralstonia solanacearum IPO1609]
 gi|83727707|gb|EAP74827.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum UW551]
 gi|206592893|emb|CAQ59799.1| typeIsecretion system protein [Ralstonia solanacearum IPO1609]
          Length = 390

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 27/186 (14%)

Query: 273 FADEMSKLTILEKTRE------QKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVPHS 325
           +A  M+ L  L K RE      ++T+L+  A  IV +   S+          LM+IVP  
Sbjct: 214 YASTMADLGPLLKVREGRADLLRRTVLTSPARGIVKDIRVSTIGGVVGAGGVLMEIVPLD 273

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQT 383
               I A+++P+ I  +  G  ATV+   +         A +E+I P  I  Q D  +  
Sbjct: 274 DQLLIEARLSPRDIAFIHPGQEATVKITAFEPSIYGSLPAKVERISPDTIEDQVDRRV-- 331

Query: 384 QEYYEVILKITDLAFSDNNIELRNG-----FPAEV----LFTAKNTTLAQEIIHPITDNW 434
             YY  +  +T  A+    +E ++G      P  V    + T + T LA  +I P+    
Sbjct: 332 --YYYRVYALTQHAY----LETKDGKRHPILPGMVATTEIRTGRRTVLAY-LIKPLNRAA 384

Query: 435 PKIFER 440
             + ER
Sbjct: 385 EALRER 390


>gi|295702956|ref|YP_003596031.1| efflux transporter, RND family, MFP subunit [Bacillus megaterium
           DSM 319]
 gi|294800615|gb|ADF37681.1| efflux transporter, RND family, MFP subunit [Bacillus megaterium
           DSM 319]
          Length = 376

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 8/75 (10%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK----KVSIKNLRCHIDTEKSALDFL 120
           G +++F V  GS++ QGT L+T+E    +D +DL+    K+  K+ +  ID+    L  L
Sbjct: 70  GEVERFHVTEGSRVQQGTSLVTYE----SDTLDLEQEQNKLERKSSQLQIDSVSKQLSNL 125

Query: 121 NNKYDVLEKAFESRE 135
           N K   LEK    +E
Sbjct: 126 NKKQKELEKEMSKQE 140


>gi|170751980|ref|YP_001758240.1| dehydrogenase catalytic domain-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658502|gb|ACB27557.1| catalytic domain of components of various dehydrogenase complexes
           [Methylobacterium radiotolerans JCM 2831]
          Length = 453

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 30/53 (56%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           I ++   +E+ SP +GI+++  V  GS++ +GTP+LT E  E      +   S
Sbjct: 40  IESDKATMEVPSPVAGIVRELLVAVGSKVSEGTPILTVEPAEGGGAAPVPDTS 92


>gi|262376225|ref|ZP_06069455.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter lwoffii SH145]
 gi|262308826|gb|EEY89959.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter lwoffii SH145]
          Length = 395

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 57/270 (21%), Positives = 105/270 (38%), Gaps = 33/270 (12%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R +L+   + L   L   Q++L M   L  K A S+ ++           L L+   ++ 
Sbjct: 152 RANLQESVAGLEQALLLVQQELEMTAPLVAKGAASEVEV-----------LRLKREANDL 200

Query: 238 KNMLRHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTIL- 293
           +N +  I   Y      + N  +E+S+   D+E  Q+    +   L+        +T+  
Sbjct: 201 RNQMNDIRNQY------YVNAREELSKANTDVETQQQVVRGKSDTLS--------RTVFK 246

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ G +      +      Q+  LM IVP  +   + A+++P+ I  ++    A V+  
Sbjct: 247 SPVRGVVKEIDVMTLGGVIPQNGKLMTIVPLDEKLLVEARISPRDIAFIRPDQEALVKIT 306

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFP 410
            Y      +    +  I P  + +D   Q Q YY V ++      S+N      +  G  
Sbjct: 307 AYDYSIYGELNGKVAMISP-DTLRDEVKQDQFYYRVYIRTDSDKLSNNAGQEFNITPGMV 365

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
           A V     + T+   +I P       + ER
Sbjct: 366 ATVDIRTGSKTVMDYLIKPFNKAKEALRER 395


>gi|296121371|ref|YP_003629149.1| secretion protein HlyD family protein [Planctomyces limnophilus DSM
           3776]
 gi|296013711|gb|ADG66950.1| secretion protein HlyD family protein [Planctomyces limnophilus DSM
           3776]
          Length = 347

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 16/63 (25%), Positives = 30/63 (47%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           GE+      + I +P SGI+ +  V  G  +  G PL T +D   T  ++ +K ++   +
Sbjct: 52  GEVQMAGEPIAIATPLSGIVTRVHVVTGQSVRAGDPLFTLDDRALTGELNFRKATLATAQ 111

Query: 108 CHI 110
             +
Sbjct: 112 AKL 114


>gi|325261903|ref|ZP_08128641.1| non-specific serine/threonine protein kinase [Clostridium sp. D5]
 gi|324033357|gb|EGB94634.1| non-specific serine/threonine protein kinase [Clostridium sp. D5]
          Length = 701

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
           FLGK +   S++ + G++ VY+    KL R  +I + + D       ++  LS  Q    
Sbjct: 7   FLGKRYEILSRIGSGGMADVYKGKDHKLNRYVAIKVLKSDFRTDEIFIQKFLSEAQA--- 63

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
               L   N V+  D+  Q+R +Y   +EL E I
Sbjct: 64  -AAGLMHPNVVNVYDVG-QDRGLYYMVMELVEGI 95


>gi|325920039|ref|ZP_08182016.1| type I secretion membrane fusion protein, HlyD family [Xanthomonas
           gardneri ATCC 19865]
 gi|325549483|gb|EGD20360.1| type I secretion membrane fusion protein, HlyD family [Xanthomonas
           gardneri ATCC 19865]
          Length = 473

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 15/160 (9%)

Query: 204 NLFEKNAVSQND--LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            L E   V ++D  L +QERI  +S L        Q+N L+ I      A  E    + +
Sbjct: 237 RLVEGKYVGRHDYLLREQERIAAESQLA------TQRNRLQEIRSAISAAQEELRVLVTD 290

Query: 262 ISRDLEQNQRTFADEMSKLTI-LEKTREQKTILS---PIAGTIVYNQSFSSSNYAQQSQP 317
             +      R  +++  +LT  + KT ++  +++   P+ GTI      +       +QP
Sbjct: 291 TCQQALDALRQASEQAGQLTQDVAKTGQRDKLMALHAPVDGTIQQLAVHTVGGVVTPAQP 350

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           L+ +VP  +   +   V  K I  ++ G   TV+   FP+
Sbjct: 351 LLVVVPAEEALEVEVTVLNKDIGFMRPGQPVTVKVESFPY 390


>gi|167031857|ref|YP_001667088.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida GB-1]
 gi|166858345|gb|ABY96752.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida GB-1]
          Length = 394

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 34/190 (17%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYK 225
           TR R +      +++   L+R+       +L + +NL +  A S+ +   LN+Q     +
Sbjct: 149 TRRRGLEQTLAGIQDSLQLVRS-------ELQITENLAKMGASSRVEVIRLNRQ-----R 196

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           S LEL+ N      ++R   EL  +A+ E A+ L E+ R         +D +++LT+   
Sbjct: 197 SELELKANEARSDYLVRAREELA-KASAE-ADSLSEVIRG-------RSDSLTRLTLR-- 245

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                   SP+ G +   +  +     Q    +MKIVP  +   I  ++ P+ I  +  G
Sbjct: 246 --------SPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRDIAFIHPG 297

Query: 346 YTATVRFPHY 355
             A V+   Y
Sbjct: 298 QAAKVKISAY 307


>gi|219855423|ref|YP_002472545.1| hypothetical protein CKR_2080 [Clostridium kluyveri NBRC 12016]
 gi|219569147|dbj|BAH07131.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 466

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 160/389 (41%), Gaps = 84/389 (21%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
           DN  E+ +  S IIK+ +V+ G ++  G  L   +  +    I+  + S+K  +    T 
Sbjct: 78  DNTAEVYTTSSNIIKEIKVKIGDEVKSGDILALLDTKDLQKEIEQMEASLKTTQA---TN 134

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           KS LD     YD  EK   SRE +                N  I+              +
Sbjct: 135 KSKLDNAQKAYDNAEKL--SREGE----------------NSQIA----------AAEGA 166

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +   +LDL++K +                K LF+  A+S+ DLN+ E I +K+     ++
Sbjct: 167 VNAAKLDLDDKKNTYED-----------NKVLFQCGAISEQDLNKSE-ISFKNA----QD 210

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ---K 290
            + + ++   +N + D+ NL+    L     + EQ +  + D+  ++ I E+ ++Q    
Sbjct: 211 TYSESSVA--LNNIKDKVNLD----LNTAKSNYEQAKFLYEDKSQQIAI-ERKKQQFSDC 263

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           T+L+P  G I    S +       S  L++I     +  I  +V    I  VK G    V
Sbjct: 264 TVLAPADGII---SSVNGVEGNPASGSLLQIQSTDNIVAI-MEVKEADIDKVKNGQKVKV 319

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNL--------QTQEYYEVILKITDL------ 396
           +     D   K  +  I KI+ I  ++DN++          +  +EV +KI DL      
Sbjct: 320 KTDSTGD---KIIQGEIIKIEDIAKEEDNDMLKLKDDSNDEEAKFEVKIKIKDLNHKLKI 376

Query: 397 ---AFSDNNIELRNG---FPAEVLFTAKN 419
              A +D  +E +N     P E +F  KN
Sbjct: 377 GMKATADIILEEKNNVYKVPYESIFKDKN 405


>gi|254505420|ref|ZP_05117567.1| secretion protein, HlyD family [Vibrio parahaemolyticus 16]
 gi|219551537|gb|EED28515.1| secretion protein, HlyD family [Vibrio parahaemolyticus 16]
          Length = 463

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 85/441 (19%), Positives = 179/441 (40%), Gaps = 36/441 (8%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + ++  +    W+    I+      G+++    +  +++   G+IK   
Sbjct: 27  NTPNSARIMLWIMVLFFVLAGVWASWAQIDKVTVGQGKVVPSSQIQVVQNLEGGLIKNIL 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL-------DFLNNKY 124
           V+ G ++ +G  LL  +D         ++  + NL   +    +++       DF NN +
Sbjct: 87  VQEGQKVEKGQQLLLIDDTRFRSDFREREQQVANLTASVMQLSASITSVAINEDFDNNTW 146

Query: 125 --DVL----EKAF-----ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
             +VL    + AF     E++ E +     +Y     K+ N  IS V + +K K   +  
Sbjct: 147 QNNVLINFNKLAFPPQLSETKPELVARQRAEYRQDLDKLRNQ-ISVVDQQVKQKQQDL-- 203

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                ++++ +   LR   +  +K+L + K L ++  V + +L + +R V  +  EL  +
Sbjct: 204 -----IEIQARVRNLRDSYNFAKKELDITKPLADEGVVPKIELLKLQRQVNDTRRELTSS 258

Query: 234 IHEQKNMLRHINELYDEANLEFAN-YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
             +   +   I E    + ++ A  +  E    L Q Q   +        LE    +  +
Sbjct: 259 ELKVPVLRSAIREAM-LSRIDIAQKFRSEQQEKLNQAQDKLSAMTESAVGLEDRVNRTIV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++      V+F
Sbjct: 318 TSPVTGTVKTLYINTVGGVIQPGMDIVEIVPSEDTLLVEAKIAPQDIAFLRPELPTIVKF 377

Query: 353 PHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGF 409
             Y   +    +  +E I  D    ++ N+     +Y V ++  + + + D  + +  G 
Sbjct: 378 SAYDFTKYGGLEGTLEHISADTTTDEEGNS-----FYLVRVRTKETSLNKDETLPIIPGM 432

Query: 410 PAEVLFTAKNTTLAQEIIHPI 430
            A V       T+ + ++ PI
Sbjct: 433 TASVDIITGKRTVMEYLLKPI 453


>gi|300698052|ref|YP_003748713.1| multidrug resistance homolog transmembrane protein (emrA)
           [Ralstonia solanacearum CFBP2957]
 gi|299074776|emb|CBJ54339.1| putative multidrug resistance homolog transmembrane protein (emrA)
           [Ralstonia solanacearum CFBP2957]
          Length = 363

 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P++G +V  +S     YA+  QPL+ +VP   + Y+ A     Q+  V+ G  AT+ 
Sbjct: 214 VTAPVSG-VVAQRSARVGGYARVGQPLLTLVPLDAV-YVEANFRETQLARVRVGQPATIT 271

Query: 352 FPHYADIREKKFKAIIEKIDP 372
                +IR    K  +E + P
Sbjct: 272 VDALPNIR---LKGRVESLGP 289


>gi|254510955|ref|ZP_05123022.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
 gi|221534666|gb|EEE37654.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
          Length = 423

 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 82/438 (18%), Positives = 172/438 (39%), Gaps = 67/438 (15%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE- 91
           TWS++  I  ++ +SG I  + N   ++ P  G++    V+ G  + +G  L+  +  E 
Sbjct: 19  TWSVVANISGAIIASGRIEVDQNRQVVQHPDGGVVAAILVKEGDLVREGQTLIRLDPSEL 78

Query: 92  TTDLIDLKKVSIKNLRCH--IDTEKSA----------LDFLNNKYDVL------EKAFES 133
            T+L   +    + L  H  ++ E+            LD      DV       ++ F +
Sbjct: 79  QTELAITESQLFETLARHGRLEAERDGQSTIEFDQLLLDRAAQNPDVADLIAGQQRLFMA 138

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R     + + +      ++ N     V +   ++    R + L  L+L ++  LL   L+
Sbjct: 139 RGASTKNEIAQLEKRKGQIGNQVEGVVAQQAAIR----RQLELIVLELGDQQQLLDKGLA 194

Query: 194 SHQKDLTM----------MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
              + L +          M NL    A ++  + +    + K     REN          
Sbjct: 195 QVSRVLALQREEAGLLGQMGNLDGMKAQAEGQITEIGIEILKLDTTRREN---------A 245

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I+EL D         L+    +L + +    +++S+L           I SP++G +   
Sbjct: 246 ISELRD---------LRVRELELREQRIALMNQLSRL----------DIKSPVSGVVHGL 286

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           Q F+  +  + + P+  I+P  +   I A+V    +  +      T+RF   + + +++ 
Sbjct: 287 QVFALQSVIRPADPVTFIIPQDRPLVINARVEAVHVDKLNLDQDVTLRF---SALDQRET 343

Query: 364 KAIIEKIDPIISQQDNNLQTQEYY---EVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             ++ K+  I +   ++  TQ+ +   ++ILK  ++        L  G P E      + 
Sbjct: 344 PELLGKVVTISADAFDDENTQQSFYRVDIILKNGEIDRLPEGTVLIPGMPVEAFIKTADR 403

Query: 421 TLAQEIIHPITDNWPKIF 438
           +    ++ P+ D + K F
Sbjct: 404 SPIVFLVKPLADYFTKAF 421


>gi|268609914|ref|ZP_06143641.1| multidrug resistance efflux pump/hemolysin secretion transmembrane
           protein, putative [Ruminococcus flavefaciens FD-1]
          Length = 415

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 88/419 (21%), Positives = 161/419 (38%), Gaps = 63/419 (15%)

Query: 25  IIGI----IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           IIG+    I  + W+ L   ++  ++SG I    N+  + +  SG +K    E G+ +  
Sbjct: 44  IIGVFTLLIAAVIWACLSKTDVVTTASGTIQPVGNISSVNAYASGTVKAINAEEGAYVKA 103

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G  L+  +       ID     ++ L+     +K   D ++   DV + +       L  
Sbjct: 104 GDVLIELDTQSIDIDIDNINNQVEVLKA----QKKIYDMISAGKDVSDISVTHYSSSLQP 159

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDL 199
           ++     T  K ++  + S+  S K      R I   +L + +N  S+ +A   + +   
Sbjct: 160 YITAITET-DKAYHNNL-SILESAKENAGLTRDIANIKLEEFKNNDSVSQAEYDAQK--- 214

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L  K A  +ND  Q E  V K+ +   E I+ Q                     +
Sbjct: 215 -----LVVKQA--ENDYIQAETNVLKAQISYSEQINSQ---------------------I 246

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG---TIVYNQSFSSSNYAQQSQ 316
            EI+  L+Q +  F  E   L+I     E + I +P+ G   TI  N    +   AQQ  
Sbjct: 247 SEITGKLKQAE--FELEKYNLSI-----ENQKITAPVNGYINTISVNNIGDTVTAAQQVI 299

Query: 317 PLMKI-VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            L+   +P   + YI+       I  +K G  A ++   Y   +    K  ++ I P   
Sbjct: 300 TLVPADIPVEMVCYIK----NMDIADIKTGMEAEIKLEAYPYNKYGTVKGTVKYISP--- 352

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
              ++  T++   V L   D+  ++ +I + +G    V       ++    + PIT  +
Sbjct: 353 ---SSFNTEKMGSVYLVKLDVENTNPDINVMSGLSGTVEVKLDRRSVMSYFLEPITKGF 408


>gi|227356381|ref|ZP_03840769.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Proteus mirabilis ATCC 29906]
 gi|227163491|gb|EEI48412.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Proteus mirabilis ATCC 29906]
          Length = 454

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 73/357 (20%), Positives = 159/357 (44%), Gaps = 38/357 (10%)

Query: 14  PASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P    R+  + I + +I  + W+ +  +++  S+ G+++      +I+      +    V
Sbjct: 37  PTPYSRIIAIIISLSVIIFLLWAYIGKLDVLSSAIGKLVVSGYSQQIQIYEHSRLSAIHV 96

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVL 127
           +NG Q+ +G  LLT + +   + I+  K  I+NL     R    ++ +  D +++ +++L
Sbjct: 97  KNGQQVTKGEALLTLDILGVDEEINNLKNKIENLLLLKIRYQALSQNTRPDTIDD-FNLL 155

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            K  E +E  LL +  K         N+  S +  + K KL   + I           + 
Sbjct: 156 NK--EKKEAVLLSY-QKEKDEFDASINHINSEIETNNKNKLLTHQEI-----------NS 201

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDL--NQQE-----RIVYKSTLELRENIHEQKNM 240
           L  L ++ +K   + K L++K  +S  +   N++E     +I+ + + EL     +++  
Sbjct: 202 LNELKNNIEKRFNIKKKLYDKKIISTMEFLENKKELLEINQIIKRKSSELIILSSQEQQY 261

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           +++ + L  + +LE+ +  K+   ++   Q+        L   +K ++ K + SP+ GT+
Sbjct: 262 IKNRDRLEKQKHLEWHDKFKQYESEVFIYQQN-------LFHAQKRQQLKVVRSPVTGTV 314

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
                 +     Q SQ +M IVP+++       +  K I  +  G  A ++   FP+
Sbjct: 315 QQLAVHTLGAVLQPSQAVMVIVPNTQHNVAEVNILNKDIGFIYPGQKAVIKIDAFPY 371


>gi|213647205|ref|ZP_03377258.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
          Length = 416

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 33/290 (11%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---NLFE---KNAVS--QNDLNQ-Q 219
           +++R+  L +  L+++ S L+  LSS +K+L ++    N+     K  +S   N LN+ Q
Sbjct: 128 SQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTNFLNKKQ 187

Query: 220 ERIVYKSTL-ELRENIHEQKN----MLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             I  KS + ++  +I  +K+    ++  I  L +E  L  +   K IS++L++ +    
Sbjct: 188 AYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLS---KIISKNLQELEVV-- 242

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA---QQSQPLMKIVPHSKLTYIR 331
              S L ++EK   ++ I SP+ G ++Y  + S++ +    Q +  L +I P  +     
Sbjct: 243 --NSTLKVIEKQINEEDIYSPVDG-VIYKINKSATTHGGVIQAADLLFEIKPKVRTMLAD 299

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            K+ PK    +       +        + K + A I+ I P   +++     Q YY+VI 
Sbjct: 300 VKILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVI- 358

Query: 392 KITDLAFSDNNIELR---NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               +AF  N  +LR    G   +        ++ + ++ P+     K F
Sbjct: 359 ----IAFDVNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 404


>gi|153948984|ref|YP_001401070.1| hypothetical protein YpsIP31758_2097 [Yersinia pseudotuberculosis
           IP 31758]
 gi|152960479|gb|ABS47940.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           31758]
          Length = 720

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGI K+F    G ++L  TP +  E   T +  +   VSI  + C+I+ +  ++D L N 
Sbjct: 501 SGIKKEFNDRTG-RLLTTTPYVNNEIQGTGETYNADGVSI--IHCYINNK--SIDSLYNP 555

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTC 149
            ++ EKA +S +    + LGKYH TC
Sbjct: 556 IEIREKASQSDDNAQYE-LGKYHYTC 580


>gi|1314576|gb|AAC44069.1| unknown [Sphingomonas sp. S88]
          Length = 464

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 77/426 (18%), Positives = 155/426 (36%), Gaps = 56/426 (13%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
            W  +  +E+   + G I        ++SP SGI+++  V  G ++ +G  L+T +   +
Sbjct: 64  AWLAIGRVEVVAPTQGRIAPIGETKIVQSPESGIVRRILVGEGQKVQKGQVLITLDPTMS 123

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-----------------YDVLEKAFESRE 135
                  +V++ + +      ++ +D L+ K                 +  L +A   + 
Sbjct: 124 AAEAAQARVALLSAQLDAARNQAIIDALDGKGFRFAAPAAAGAAEVETHRGLARARLGQI 183

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNR-LDLENKSSLLRAL-- 191
           E +L   G+  S  +   +    +  R L+  L  + + I  N  +  +   S LR +  
Sbjct: 184 EAMLAG-GRSDSGAAASASAEAQAQVRKLEQSLPLLEQQIAANEAMAAKGYVSKLRVVEM 242

Query: 192 ---LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L S ++DLT  +    K       L QQ R     ++  RE    Q  +L+ + +  
Sbjct: 243 RRQLISERQDLTAARATVAK-------LGQQSRSASSMSIRTREEARAQ--VLQDLVKAQ 293

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D+                    R  ++E++K  +    RE +   +P++GT+   Q  + 
Sbjct: 294 DDV-------------------RARSEEVAKANLRSSFRELR---APVSGTVSQLQVHTE 331

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               + ++PL+ +VP +        V    I  V+ G    V+   +   R       + 
Sbjct: 332 GGVVEGAKPLLSLVPDNARLEAEVMVDNSDIGFVRTGMPVKVKLQAFPHTRYGMIPGTVV 391

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I P   Q            + L    +  +  ++ LR G  A         TL   ++ 
Sbjct: 392 GIAPEAVQVKEGQPPVYKARIALDRGYVIANGGHVPLRPGMIASADIVTGKRTLLSYLVG 451

Query: 429 PITDNW 434
           P+ +  
Sbjct: 452 PMLETG 457


>gi|45441640|ref|NP_993179.1| hypothetical protein YP_1836 [Yersinia pestis biovar Microtus str.
           91001]
 gi|145598429|ref|YP_001162505.1| hypothetical protein YPDSF_1134 [Yersinia pestis Pestoides F]
 gi|162421304|ref|YP_001606911.1| hypothetical protein YpAngola_A2494 [Yersinia pestis Angola]
 gi|229894696|ref|ZP_04509876.1| putative exported protein [Yersinia pestis Pestoides A]
 gi|45436502|gb|AAS62056.1| putative exported protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|145210125|gb|ABP39532.1| hypothetical protein YPDSF_1134 [Yersinia pestis Pestoides F]
 gi|162354119|gb|ABX88067.1| conserved hypothetical protein [Yersinia pestis Angola]
 gi|229702169|gb|EEO90188.1| putative exported protein [Yersinia pestis Pestoides A]
          Length = 720

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGI K+F    G ++L  TP +  E   T +  +   VSI  + C+I+ +  ++D L N 
Sbjct: 501 SGIKKEFNDRTG-RLLTTTPYVNNEIQGTGETYNADGVSI--IHCYINNK--SIDSLYNP 555

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTC 149
            ++ EKA +S +    + LGKYH TC
Sbjct: 556 IEIREKASQSDDNAQYE-LGKYHYTC 580


>gi|299133463|ref|ZP_07026657.1| efflux transporter, RND family, MFP subunit [Afipia sp. 1NLS2]
 gi|298591299|gb|EFI51500.1| efflux transporter, RND family, MFP subunit [Afipia sp. 1NLS2]
          Length = 417

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           ++ED   ++ SP++G + K  V  G  + QG PL     +E TD +  +   I  L    
Sbjct: 93  IDEDRSTQVFSPYTGRVTKLLVRAGDHVEQGQPLFV---LEATDTVQAQNEFIAALTA-T 148

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           +  +SALD    +    ++ F+ +   L D+
Sbjct: 149 NKARSALDLAQTQGKRAKELFDGKAVPLKDY 179


>gi|209885778|ref|YP_002289635.1| secretion protein HlyD [Oligotropha carboxidovorans OM5]
 gi|209873974|gb|ACI93770.1| secretion protein HlyD [Oligotropha carboxidovorans OM5]
          Length = 410

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           ++ED   ++ SP++G + K  V  G Q+ QG PL     +E  D +  +   I  L    
Sbjct: 86  IDEDRSTQVFSPYTGRVTKLLVRPGEQVAQGQPLFV---LEAADTVQSQNDFIAALTAS- 141

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           +  +SALD    +    ++ F+ +   L D+
Sbjct: 142 NKAQSALDLAQTQGKRAKELFDGKAIPLKDY 172


>gi|282881709|ref|ZP_06290372.1| putative lipoprotein [Prevotella timonensis CRIS 5C-B1]
 gi|281304468|gb|EFA96565.1| putative lipoprotein [Prevotella timonensis CRIS 5C-B1]
          Length = 297

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 4/104 (3%)

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
           N +  A+++ K  IL++  +   I SPI+G IV  +      +A   +PL K+   + + 
Sbjct: 156 NSQMNANDIQKRQILDQLAKCH-ITSPISG-IVLEKYAEQGEFASIGKPLFKVADMNNV- 212

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            +RA VT +Q+QHVK G    V F  Y + + + ++  +  I P
Sbjct: 213 ILRAYVTNQQLQHVKIGQQVQV-FSDYGNEQRETYQGKVVWISP 255


>gi|78779618|ref|YP_397730.1| secretion protein HlyD [Prochlorococcus marinus str. MIT 9312]
 gi|78713117|gb|ABB50294.1| Secretion protein HlyD [Prochlorococcus marinus str. MIT 9312]
          Length = 353

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 27/202 (13%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E  +YK   EL  NI +QK+       LY E  +           D E  + ++    +K
Sbjct: 100 EDFIYK-IEELELNIEKQKSEFLRREYLYQEGAVS--------KEDYESYKNSYDISSAK 150

Query: 280 LTILEKTREQKTILSPIAGTIV--YNQSFS----SSNYAQQSQPLMKIVPHSKLTYIRAK 333
           L   +  +    I +P  G I   Y +  S    S+N +  S+    I   S+   I AK
Sbjct: 151 LNDAKAEKSFYIIKAPYGGKITAKYAEIGSYVTPSTNLSSDSKTKNFIFELSEGLEIVAK 210

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    I  +K G  A+VR   Y     KK+ AI+EKI    + +DNN+ +   +EV L  
Sbjct: 211 VPESDIGRIKIGQEASVRIEAYPS---KKYTAIVEKI-ATRAVKDNNVTS---FEVTLN- 262

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
               F D + E++ G  A++ F
Sbjct: 263 ----FKDISEEIKIGMTADLEF 280


>gi|4838369|gb|AAD30977.1|AF121772_1 NatD [Neisseria meningitidis]
          Length = 475

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 74/354 (20%), Positives = 135/354 (38%), Gaps = 66/354 (18%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET- 92
           WS    I+I  ++SG+ ++      I+   + ++K   V +G  + QG  L   E + T 
Sbjct: 72  WSWFGKIDIVAAASGKTVSGGRSKTIQPLETAVVKAVHVRDGQHVKQGETLAELEAVGTD 131

Query: 93  TDLID----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +D++     L+   +  LR                Y+ +  A ESR    +D        
Sbjct: 132 SDVVQSEQALQAAQLSKLR----------------YEAVLAALESRTVPHIDM------- 168

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++  + G+S         L + +       D +     L++ L  HQ +L   K   E+
Sbjct: 169 -AQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQ-----LQSALRGHQAELQSAKAQ-EQ 221

Query: 209 NAVSQNDLNQQERIVYKSTLELREN--IHEQKNMLRHINELYDEANLEFA-NYLKEISRD 265
             VS   + QQ+   Y+    LR +  I E   + +    + +  +LE     +K+I   
Sbjct: 222 KLVSVGAIEQQKTADYR---RLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMKQIQAA 278

Query: 266 LEQNQRTFA---------------------DEMSKLTILEKTREQ-KTILSPIAGTIVYN 303
           + Q +++                       D+    T   K R+Q  TI SP  GT+   
Sbjct: 279 IAQAEQSRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGTVQEL 338

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
            +++     Q +Q +M + P      +   V  K I  V++G  A V+   FP+
Sbjct: 339 ATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY 392


>gi|293395375|ref|ZP_06639659.1| multidrug resistance efflux pump [Serratia odorifera DSM 4582]
 gi|291422059|gb|EFE95304.1| multidrug resistance efflux pump [Serratia odorifera DSM 4582]
          Length = 372

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 6/98 (6%)

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           LTI         I+SPI GT V   +  +  YA+   PL+ +VP +  TY+ A     QI
Sbjct: 230 LTIARINLASTRIVSPINGT-VGEHALRAGQYAETGSPLLSVVPGN--TYVVANFKETQI 286

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            H++    A V+   +     + FK  +E   P    Q
Sbjct: 287 DHMQVDQPAEVQVDAFGG---QVFKGKVESFSPASGAQ 321


>gi|300693300|ref|YP_003749273.1| type I secretion adaptor protein (hlyd family) [Ralstonia
           solanacearum PSI07]
 gi|299075337|emb|CBJ34631.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum PSI07]
          Length = 447

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 66/324 (20%), Positives = 127/324 (39%), Gaps = 43/324 (13%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
            WSIL  ++I V+++G+I+  +    I +     ++K  VE G Q+++   +L   D   
Sbjct: 75  AWSILGKVDIIVNATGKIIPSERTKTIAAVEVATVRKLHVEEG-QVVKAGDVLIELDARA 133

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +D    K V                   N +   L+ A   R   L+D LG   +     
Sbjct: 134 SDSERDKAVG------------------NAQLARLQAA---RSRALIDALGHGRTPHLPT 172

Query: 153 FNYGISSVYRSLKMKLT---RMRSIYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFEK 208
                   +   +  L    R  +  LNRLD E  + +    + +   +D     +L + 
Sbjct: 173 LEAIPPERWHEAEQHLVDQWRDYTAKLNRLDGEIRRYAEELPIATQRARDYA---DLAKD 229

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             VS++   ++E+       +LR+   ++  +      +  ++  +    L E S D   
Sbjct: 230 RDVSRHAYLEKEQARIDIEGQLRDARDQKAALTAETRRVAQDSLTDAKKILGESSED--- 286

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +R  A             EQ  +++P++GT+      +       +QPLM+IVP   + 
Sbjct: 287 ARRASAHS-----------EQLKLVAPVSGTVQQLTVHTVGTAVPLAQPLMQIVPEQSVV 335

Query: 329 YIRAKVTPKQIQHVKKGYTATVRF 352
            + A +  K +  V++G  A V+ 
Sbjct: 336 EVEAFLENKDVGFVQEGQEAQVKI 359


>gi|218440508|ref|YP_002378837.1| secretion protein HlyD [Cyanothece sp. PCC 7424]
 gi|218173236|gb|ACK71969.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7424]
          Length = 589

 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 20/79 (25%), Positives = 45/79 (56%), Gaps = 2/79 (2%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILL-PIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           R  P +  R  + +I+G+         + PIE  V ++G++  +  V E+++P +G++K+
Sbjct: 65  RQSP-TWSRGVVWTIVGVTVAAIIWAAVAPIEQVVQATGQLKPQGKVKEVQAPVNGVVKE 123

Query: 70  FQVENGSQILQGTPLLTFE 88
             V++G ++ +G  L+ F+
Sbjct: 124 VLVKDGEKVEKGEVLVIFD 142


>gi|111219574|ref|YP_710368.1| dihydrolipoamide acyltransferase component [Frankia alni ACN14a]
 gi|111147106|emb|CAJ58751.1| dihydrolipoamide acyltransferase component [Frankia alni ACN14a]
          Length = 537

 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 23/39 (58%)

Query: 49 EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
          E+     VVEI SPF+GI+ +   E GS +  G PLLT 
Sbjct: 39 EVETAKAVVEIPSPFAGILVEIHGEAGSTLAVGAPLLTV 77


>gi|170722974|ref|YP_001750662.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida W619]
 gi|169760977|gb|ACA74293.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida W619]
          Length = 451

 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 81/175 (46%), Gaps = 16/175 (9%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH----I 244
           R+ +   Q++L M   L  K A+S  ++ +    + + T+E R  ++     +      +
Sbjct: 200 RSAVGLLQQELNMSAPLVSKGAISPVEILR----LKQRTVEARGQLNATSLAIPRAEAAV 255

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI----LEKTREQKTILSPIAGTI 300
            E+  +     A++  E +++L  ++RT   E+SK+T     ++    + T++SP+ G +
Sbjct: 256 AEIRSKIQESDASFRSEAAKEL-NDKRT---ELSKITATSIAIDDRVNRTTVVSPVHGIV 311

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
              +  +     Q    L++IVP      I AKV P+ +  +  G  A V+F  Y
Sbjct: 312 KMLKVNTIGGVVQPGSDLVEIVPIEDNLLIEAKVRPQDVAFLHPGQPAMVKFSAY 366


>gi|161617394|ref|YP_001591359.1| hypothetical protein SPAB_05249 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167991456|ref|ZP_02572555.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168231262|ref|ZP_02656320.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168243663|ref|ZP_02668595.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168263412|ref|ZP_02685385.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168466949|ref|ZP_02700797.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|194443738|ref|YP_002043512.1| hypothetical protein SNSL254_A4605 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450071|ref|YP_002048252.1| hypothetical protein SeHA_C4604 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194469521|ref|ZP_03075505.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197248154|ref|YP_002149175.1| hypothetical protein SeAg_B4519 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264567|ref|ZP_03164641.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197300899|ref|ZP_03166228.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|200388980|ref|ZP_03215592.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205359915|ref|ZP_02833290.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|224586028|ref|YP_002639827.1| type-I secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238912992|ref|ZP_04656829.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|161366758|gb|ABX70526.1| hypothetical protein SPAB_05249 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402401|gb|ACF62623.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408375|gb|ACF68594.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194455885|gb|EDX44724.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|195630655|gb|EDX49267.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197211857|gb|ACH49254.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197242822|gb|EDY25442.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197289950|gb|EDY29309.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|199606078|gb|EDZ04623.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205330118|gb|EDZ16882.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205334325|gb|EDZ21089.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205337270|gb|EDZ24034.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205342088|gb|EDZ28852.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205347957|gb|EDZ34588.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|224470556|gb|ACN48386.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|312915364|dbj|BAJ39338.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223130|gb|EFX48200.1| Putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
          Length = 416

 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 33/290 (11%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---NLFE---KNAVS--QNDLNQ-Q 219
           +++R+  L +  L+++ S L+  LSS +K+L ++    N+     K  +S   N LN+ Q
Sbjct: 128 SQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTNFLNKKQ 187

Query: 220 ERIVYKSTL-ELRENIHEQKN----MLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             I  KS + ++  +I  +K+    ++  I  L +E  L  +   K IS++L++ +    
Sbjct: 188 AYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLS---KIISKNLQELEVV-- 242

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA---QQSQPLMKIVPHSKLTYIR 331
              S L ++EK   ++ I SP+ G ++Y  + S++ +    Q +  L +I P  +     
Sbjct: 243 --NSTLKVIEKQINEEDIYSPVDG-VIYKINKSATTHGGVIQAADLLFEIKPKVRTMLAD 299

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            K+ PK    +       +        + K + A I+ I P   +++     Q YY+VI 
Sbjct: 300 VKILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVI- 358

Query: 392 KITDLAFSDNNIELR---NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               +AF  N  +LR    G   +        ++ + ++ P+     K F
Sbjct: 359 ----IAFDVNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 404


>gi|76443872|gb|ABA42643.1| RTX D transport protein [Moraxella bovoculi 237]
          Length = 475

 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 81/379 (21%), Positives = 149/379 (39%), Gaps = 98/379 (25%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           +I ++  + WS +  I+I  ++SG+I +      I+S  + I+K   V +G  I QG  L
Sbjct: 63  MIFVLFALLWSWVGQIDIVATASGKISSGSRSKTIQSLETAIVKAVHVRDGQNIQQGEVL 122

Query: 85  LTFEDIET-TDLID----LKKVSIKNLRCHIDTEKSALDF-LNNKYDVLE---------- 128
           +    + + +D+      L+   +  LR  ++   SAL+  +N K D+            
Sbjct: 123 VDLVAVGSDSDVAQSEKALRAAQLSKLR--LEAILSALNHRINPKIDLAYAKSLNISESE 180

Query: 129 ------------KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                       +A+ +++EQL   L  + +              RS + KL  + +I  
Sbjct: 181 INEAQTLAQNQYQAWLAQDEQLKLILKGHQAELQSA---------RSQEQKLVAVGAIER 231

Query: 177 NRLD----------------LENKSSLLRALLSSHQKDLTMMKNLFEK--NAVSQNDLNQ 218
            + D                LE +S LL     S+Q DL   ++  +K   A+ Q +   
Sbjct: 232 QKTDDYRKLKAENFISEHAYLEQESKLL-----SNQNDLQSTRSQIQKIQAAIMQAE--- 283

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           Q R++Y   L+ R+ +   +     IN+   +AN              +Q Q+       
Sbjct: 284 QNRMLYTQNLK-RDTLESLRQTNEQINQYTGQAN------------KAKQRQKLL----- 325

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                       +I SP++GT+    +++     Q +Q +M +VP+     +   V  K 
Sbjct: 326 ------------SIKSPVSGTVQELATYTLGGVVQAAQKIMVVVPNDNQVEVEVLVLNKD 373

Query: 339 IQHVKKGYTATVR---FPH 354
           I  VK G    V+   FP+
Sbjct: 374 IGFVKVGQDVIVKVESFPY 392


>gi|30014087|emb|CAD89203.1| putative membrane fusion protein [Pseudomonas fluorescens]
          Length = 114

 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 34/70 (48%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L+I+G     TW+ L P++  +   G ++       ++S  SG++ +  V  G  + QG
Sbjct: 36  ILAIVGAGSFFTWAALAPLDQGIPVQGTVVVSGKRKAVQSMNSGVVSRILVREGEIVKQG 95

Query: 82  TPLLTFEDIE 91
            PL   +  +
Sbjct: 96  QPLFRLDQTQ 105


>gi|163743518|ref|ZP_02150896.1| putative toxin secretion transmembrane protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161383221|gb|EDQ07612.1| putative toxin secretion transmembrane protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 467

 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 81/443 (18%), Positives = 174/443 (39%), Gaps = 42/443 (9%)

Query: 9   LKRNHPASLKRMTLLSII---GIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           L R  P  ++++ +  ++   G+ G L+ W+    +  +V +SG+     + + ++    
Sbjct: 33  LPRTPPTRVRQLVMWMLVCGFGLFGGLVFWATQAEMTSAVVASGQFTVAGDRLSVQHLEG 92

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTE-------- 113
           GI+++  V  G  + +G  +   +      +  ++  +  S+   +  +  E        
Sbjct: 93  GIVREINVAEGDMVAEGDVIAVLDGRRMRASRAILTSQMASLLAQQARLQAELAEADQIE 152

Query: 114 -KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             + LD L  +   L   FE + +        Y     ++    IS + + L  +  R+ 
Sbjct: 153 VPAELDQLIAEDPQLVSLFEVQRDVFTSNRALYEGQV-QILRDRISQLGKQLNGRQARIT 211

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN--QQERIVYKSTLEL 230
           +I       E++ +L++  ++   K       L+EK  V +  L+  Q +      T   
Sbjct: 212 AI-------EDQLTLIKGEVADLHK-------LYEKGLVPKTRLSDRQLQHTGLMGTFGA 257

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            E+  + +N+   I E  +       + +  IS + +  Q    D   +L   E   +++
Sbjct: 258 LES--DSENIQERIAETEERILQVHRDTVNRISSETQLVQERILDLRQRLDAAEDVLDRQ 315

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +P AG +V     +        Q ++++VP      +  +V+P  I  V  G  A V
Sbjct: 316 IIRAPQAGRVVDLSINTLGQVLNPGQNVLELVPSGSDLIVETRVSPTDIDEVVTGGQARV 375

Query: 351 RFPHYA--DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRN 407
           +   Y+       + + ++   D I    D N     YY V ++I     +   N++   
Sbjct: 376 QLTAYSFRSTPPVRGEVVMVAADSI---ADLN-SGIPYYRVHIRIPPEELAALPNVKTLP 431

Query: 408 GFPAEVLFTAKNTTLAQEIIHPI 430
           G PA+ +      TLA  ++ P+
Sbjct: 432 GMPAQAMIETGRQTLADYLLSPV 454


>gi|119486331|ref|ZP_01620390.1| hypothetical protein L8106_16794 [Lyngbya sp. PCC 8106]
 gi|119456544|gb|EAW37674.1| hypothetical protein L8106_16794 [Lyngbya sp. PCC 8106]
          Length = 618

 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 75/373 (20%), Positives = 148/373 (39%), Gaps = 52/373 (13%)

Query: 42  ISVSSSGEILN-EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           I + ++G+I       VE+ SP +G + +  VE G  + QG  L     + + +L+ L+ 
Sbjct: 76  IGIKTTGQIETLPRKTVEVTSPLAGKVIELLVEPGDTVNQGEILAV---LSSPELVSLRV 132

Query: 101 VSIKN---LRCHIDTEKSALDFLNNKY----DVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +++N    + H+   ++ L+     Y    ++ E   E    QL     +Y    + V 
Sbjct: 133 EALQNQGEAQAHLKQAQANLELAQQNYQRQQNIAEAEIEQANNQLKAAQLRYERDQAIVE 192

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD--LTMMKNLFEKN-- 209
              +  V +         R I + + ++E   + L   L ++Q+D  LT    L  ++  
Sbjct: 193 RGAVVGVAQE-----NYQRQIEIAKAEIEQAETALEVALENYQRDEELTNAGALPRRDFL 247

Query: 210 ------AVSQNDL--NQQERIVYKSTLELRE--------NIHEQKNMLRHINELYDEAN- 252
                 A ++ DL   Q  R V  +  E+++        ++ E + +L         AN 
Sbjct: 248 ESKERLANAKTDLARAQSRREVLSAETEVKQAEIDLPVRDLRESEGLLAEAKSQQIRANQ 307

Query: 253 ----LEFANYLKEISRDLEQ-------NQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
               LE    LK    +LE        +Q T+   + +L        +  I +PI+G + 
Sbjct: 308 KREVLEAEAELKRTEAELEAAKSNLNLSQTTYEIRLQQLGTNGNNEGKVIITAPISGVVS 367

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +     +      PLM I  +S++ +  A +  K +  V+ G    ++     +   +
Sbjct: 368 DREITLGQSVDDAGLPLMTIQDNSQV-WATANLYEKDVAQVRLGQNVRLKVNSLPN---Q 423

Query: 362 KFKAIIEKIDPII 374
            F+  I +I PI+
Sbjct: 424 VFEGRIAQISPIV 436


>gi|300868382|ref|ZP_07113007.1| putative chromosome segregation ATPase-like protein [Oscillatoria
           sp. PCC 6506]
 gi|300333600|emb|CBN58195.1| putative chromosome segregation ATPase-like protein [Oscillatoria
           sp. PCC 6506]
          Length = 606

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 23  LSIIG---IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           LS++G   I+GL  WSI   I I++   G  +    VV+ +SP SG +K   V+ G  I 
Sbjct: 41  LSVLGGLVIVGL-AWSIFGKIPITIDGRGIFIAPRQVVDFQSPISGQLKTLYVQAGQCIA 99

Query: 80  QGTPLLTFEDIE 91
           +   L T +  E
Sbjct: 100 KNERLATIDPSE 111


>gi|237713566|ref|ZP_04544047.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229446288|gb|EEO52079.1| conserved hypothetical protein [Bacteroides sp. D1]
          Length = 303

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 28/193 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R DL  + +  +  + + +++   ++NL    A +Q  L+  +  V    LE 
Sbjct: 84  MKSVENQRPDLAKQIAATKQQIVTAERERKRVENLLAAGAANQKQLDDWDAQV--KLLE- 140

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R+ + ++ ++    N L ++ N         ++  + Q      D+++K           
Sbjct: 141 RQLVAQESSLRNSTNSLTEQGN--------SVAIQVAQ----VEDQLAKC---------- 178

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + SPIAGT++   +  +   A   +PL K+    ++ Y+RA +T +Q+  VK G   TV
Sbjct: 179 HVQSPIAGTVLAKYA-EAGELAAIGKPLFKVGEVDRM-YLRAYITSEQLSQVKLGDQVTV 236

Query: 351 RFPHYADIREKKF 363
            +  Y +  +K +
Sbjct: 237 -YADYGNSEQKAY 248


>gi|16767510|ref|NP_463125.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56416059|ref|YP_153134.1| type-I secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62182709|ref|YP_219126.1| membrane permease, cation efflux pump [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|197364986|ref|YP_002144623.1| type-I secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|204926668|ref|ZP_03217870.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205355031|ref|YP_002228832.1| type-I secretion protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207859413|ref|YP_002246064.1| type-I secretion protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|3323590|gb|AAC26642.1| HLYD family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16422819|gb|AAL23084.1| membrane permease [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|32812844|emb|CAE11796.1| putative type-I secretion protein, putative inner membrane
           component [Salmonella typhimurium]
 gi|56130316|gb|AAV79822.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62130342|gb|AAX68045.1| membrane permease, predicted cation efflux pump [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|197096463|emb|CAR62069.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|204323333|gb|EDZ08528.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205274812|emb|CAR39871.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206711216|emb|CAR35592.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261249359|emb|CBG27222.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267996574|gb|ACY91459.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301160752|emb|CBW20283.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|320088667|emb|CBY98425.1| Leukotoxin secretion protein D [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322615415|gb|EFY12335.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618475|gb|EFY15364.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622113|gb|EFY18963.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627184|gb|EFY23976.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631144|gb|EFY27908.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637638|gb|EFY34339.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642523|gb|EFY39123.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322643621|gb|EFY40176.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322654664|gb|EFY50984.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659624|gb|EFY55867.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662167|gb|EFY58383.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666087|gb|EFY62265.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672507|gb|EFY68618.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675936|gb|EFY72007.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680421|gb|EFY76459.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684685|gb|EFY80689.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322717209|gb|EFZ08780.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323132600|gb|ADX20030.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323194637|gb|EFZ79828.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197121|gb|EFZ82262.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201761|gb|EFZ86825.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206275|gb|EFZ91237.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213286|gb|EFZ98088.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215657|gb|EGA00401.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222079|gb|EGA06465.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226490|gb|EGA10696.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229115|gb|EGA13244.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323236275|gb|EGA20351.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237605|gb|EGA21666.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241729|gb|EGA25758.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248124|gb|EGA32061.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323254546|gb|EGA38357.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258394|gb|EGA42071.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323259674|gb|EGA43308.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265947|gb|EGA49443.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270389|gb|EGA53837.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326630184|gb|EGE36527.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332991076|gb|AEF10059.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 425

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 33/290 (11%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---NLFE---KNAVS--QNDLNQ-Q 219
           +++R+  L +  L+++ S L+  LSS +K+L ++    N+     K  +S   N LN+ Q
Sbjct: 137 SQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTNFLNKKQ 196

Query: 220 ERIVYKSTL-ELRENIHEQKN----MLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             I  KS + ++  +I  +K+    ++  I  L +E  L  +   K IS++L++ +    
Sbjct: 197 AYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLS---KIISKNLQELEVV-- 251

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA---QQSQPLMKIVPHSKLTYIR 331
              S L ++EK   ++ I SP+ G ++Y  + S++ +    Q +  L +I P  +     
Sbjct: 252 --NSTLKVIEKQINEEDIYSPVDG-VIYKINKSATTHGGVIQAADLLFEIKPKVRTMLAD 308

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            K+ PK    +       +        + K + A I+ I P   +++     Q YY+VI 
Sbjct: 309 VKILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVI- 367

Query: 392 KITDLAFSDNNIELR---NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               +AF  N  +LR    G   +        ++ + ++ P+     K F
Sbjct: 368 ----IAFDVNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 413


>gi|153954978|ref|YP_001395743.1| hypothetical protein CKL_2360 [Clostridium kluyveri DSM 555]
 gi|146347836|gb|EDK34372.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
          Length = 452

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 93/389 (23%), Positives = 160/389 (41%), Gaps = 84/389 (21%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
           DN  E+ +  S IIK+ +V+ G ++  G  L   +  +    I+  + S+K  +    T 
Sbjct: 64  DNTAEVYTTSSNIIKEIKVKIGDEVKSGDILALLDTKDLQKEIEQMEASLKTTQA---TN 120

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           KS LD     YD  EK   SRE +                N  I+              +
Sbjct: 121 KSKLDNAQKAYDNAEKL--SREGE----------------NSQIA----------AAEGA 152

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +   +LDL++K +                K LF+  A+S+ DLN+ E I +K+     ++
Sbjct: 153 VNAAKLDLDDKKNTYED-----------NKVLFQCGAISEQDLNKSE-ISFKNA----QD 196

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ---K 290
            + + ++   +N + D+ NL+    L     + EQ +  + D+  ++ I E+ ++Q    
Sbjct: 197 TYSESSVA--LNNIKDKVNLD----LNTAKSNYEQAKFLYEDKSQQIAI-ERKKQQFSDC 249

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           T+L+P  G I    S +       S  L++I     +  I  +V    I  VK G    V
Sbjct: 250 TVLAPADGII---SSVNGVEGNPASGSLLQIQSTDNIVAI-MEVKEADIDKVKNGQKVKV 305

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNL--------QTQEYYEVILKITDL------ 396
           +     D   K  +  I KI+ I  ++DN++          +  +EV +KI DL      
Sbjct: 306 KTDSTGD---KIIQGEIIKIEDIAKEEDNDMLKLKDDSNDEEAKFEVKIKIKDLNHKLKI 362

Query: 397 ---AFSDNNIELRNG---FPAEVLFTAKN 419
              A +D  +E +N     P E +F  KN
Sbjct: 363 GMKATADIILEEKNNVYKVPYESIFKDKN 391


>gi|157165040|ref|YP_001466533.1| acriflavine resistance protein [Campylobacter concisus 13826]
 gi|112800690|gb|EAT98034.1| type I secretion membrane fusion protein, HlyD [Campylobacter
           concisus 13826]
          Length = 488

 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 76/361 (21%), Positives = 141/361 (39%), Gaps = 48/361 (13%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P++ K++     I +  L+ W+    I+     SG+I+       I++   GI+ +  V+
Sbjct: 71  PSTSKKILYAVSITVFWLLLWASWAQIDEITRGSGKIIPSGKNQAIQNLEGGIVDQIFVK 130

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +   L+  ++              KN        K  LD L  K+  L+     
Sbjct: 131 EGDEVKKDQILIRLDN--------------KNFTSSYGESKLRLDELQAKFMRLDAEAND 176

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL--------DLENKS 185
           +E    D+     +  SK   Y I S++ S    L     I   ++        +L NK 
Sbjct: 177 KE---FDYNETRDANNSKAVRYEI-SLHNSNIDHLNEQIGILTEQIHQRQSELTELRNKI 232

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           S  +   +   K+  +M+ +F+K  VS+ +  Q +R V     EL  ++     +   I 
Sbjct: 233 SQTQNSYNLVLKEKAIMEPIFKKGLVSEVEYIQLQRRVNDLKGELDASVLAVPRVESTIK 292

Query: 246 EL---YDEANLEFANYLK--------EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           E     +EA L F N  K        EI+R + ++Q + +D +          E+  + S
Sbjct: 293 EAKNKIEEAKLAFKNNAKKELNEVSAEIAR-INESQISLSDRV----------ERTYVRS 341

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P+ G +      + S   +  + + +IVP         KV P  +  ++ G    V+F  
Sbjct: 342 PVNGIVSKMMVHTVSGVIKPGENIAEIVPLEDKLIAEVKVKPADVAFLRPGLDTMVKFTA 401

Query: 355 Y 355
           Y
Sbjct: 402 Y 402


>gi|104782681|ref|YP_609179.1| RND efflux membrane fusion protein [Pseudomonas entomophila L48]
 gi|95111668|emb|CAK16389.1| putative RND efflux membrane fusion protein [Pseudomonas
           entomophila L48]
          Length = 391

 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 4/119 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV++ G  L     V++ +  SG I+K   E G ++ QG  L+  +       +D  
Sbjct: 46  IESSVTALG-TLQPRRYVDVGAQASGQIRKLHAEAGDEVRQGQLLVEIDPSTQQAKLDAG 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           + SI+NL+  +  +++       +Y     L  A  +R+E L     +   T +++  Y
Sbjct: 105 RFSIENLKAQLAEQRAQFVLAQQQYQRQHDLAAAGATRQEDLQAAQAQLKVTQARIDMY 163


>gi|16762940|ref|NP_458557.1| type-I secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29144427|ref|NP_807769.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213851950|ref|ZP_03381482.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|25511940|pir||AB1018 probable type-I secretion protein STY4457 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16505247|emb|CAD09243.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29140065|gb|AAO71629.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 425

 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 33/290 (11%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---NLFE---KNAVS--QNDLNQ-Q 219
           +++R+  L +  L+++ S L+  LSS +K+L ++    N+     K  +S   N LN+ Q
Sbjct: 137 SQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTNFLNKKQ 196

Query: 220 ERIVYKSTL-ELRENIHEQKN----MLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             I  KS + ++  +I  +K+    ++  I  L +E  L  +   K IS++L++ +    
Sbjct: 197 AYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLS---KIISKNLQELEVV-- 251

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA---QQSQPLMKIVPHSKLTYIR 331
              S L ++EK   ++ I SP+ G ++Y  + S++ +    Q +  L +I P  +     
Sbjct: 252 --NSTLKVIEKQINEEDIYSPVDG-VIYKINKSATTHGGVIQAADLLFEIKPKVRTMLAD 308

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            K+ PK    +       +        + K + A I+ I P   +++     Q YY+VI 
Sbjct: 309 VKILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVI- 367

Query: 392 KITDLAFSDNNIELR---NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               +AF  N  +LR    G   +        ++ + ++ P+     K F
Sbjct: 368 ----IAFDVNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 413


>gi|159045042|ref|YP_001533836.1| secretion protein [Dinoroseobacter shibae DFL 12]
 gi|157912802|gb|ABV94235.1| secretion protein [Dinoroseobacter shibae DFL 12]
          Length = 439

 Score = 38.5 bits (88), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 11/150 (7%)

Query: 282 ILEKTREQKTIL------SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
           ILE  R  + ++      +P+ G +      S        + +++IVP      I A++ 
Sbjct: 274 ILESIRRAEDVVTRAALRAPVTGVVSALNVSSQGEVVTPGEEVLRIVPEGTGLEIEARLR 333

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI-- 393
           P+ I  V+ G  A V+   +           + ++     Q D+  +T  ++ +I++   
Sbjct: 334 PEDIAFVRPGLPAKVKITAFDFTIYGALPGHVVRVGADAEQDDSTGET--FFPIIIQTEE 391

Query: 394 TDLAFSDNNIELRNGFPAEV-LFTAKNTTL 422
           T L      +E+R G  A V + T + T L
Sbjct: 392 TQLTRGQEVLEIRPGMVASVDILTGERTVL 421


>gi|198244512|ref|YP_002218155.1| hypothetical protein SeD_A4655 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197939028|gb|ACH76361.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
          Length = 416

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 33/290 (11%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---NLFE---KNAVS--QNDLNQ-Q 219
           +++R+  L +  L+++ S L+  LSS +K+L ++    N+     K  +S   N LN+ Q
Sbjct: 128 SQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTNFLNKKQ 187

Query: 220 ERIVYKSTL-ELRENIHEQKN----MLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             I  KS + ++  +I  +K+    ++  I  L +E  L  +   K IS++L++ +    
Sbjct: 188 TYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLS---KIISKNLQELEVV-- 242

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA---QQSQPLMKIVPHSKLTYIR 331
              S L ++EK   ++ I SP+ G ++Y  + S++ +    Q +  L +I P  +     
Sbjct: 243 --NSTLKVIEKQINEEDIYSPVDG-VIYKINKSATTHGGVIQAADLLFEIKPKVRTMLAD 299

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            K+ PK    +       +        + K + A I+ I P   +++     Q YY+VI 
Sbjct: 300 VKILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVI- 358

Query: 392 KITDLAFSDNNIELR---NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               +AF  N  +LR    G   +        ++ + ++ P+     K F
Sbjct: 359 ----IAFDVNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 404


>gi|262406337|ref|ZP_06082886.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294646581|ref|ZP_06724217.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294806645|ref|ZP_06765479.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
 gi|262355040|gb|EEZ04131.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292638104|gb|EFF56486.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294446181|gb|EFG14814.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 311

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 87/193 (45%), Gaps = 28/193 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R DL  + +  +  + + +++   ++NL    A +Q  L+  +  V    L  
Sbjct: 92  MKSVENQRPDLAKQIAATKQQIVTAERERKRVENLLAAGAANQKQLDDWDAQV---KLLE 148

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R+ + ++ ++    N L ++ N         ++  + Q      D+++K           
Sbjct: 149 RQLVAQESSLRNSTNSLTEQGN--------SVAIQVAQ----VEDQLAKC---------- 186

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + SPIAGT++   +  +   A   +PL K+    ++ Y+RA +T +Q+  VK G   TV
Sbjct: 187 HVQSPIAGTVLAKYA-EAGELAAIGKPLFKVGEVDRM-YLRAYITSEQLSQVKLGDQVTV 244

Query: 351 RFPHYADIREKKF 363
            +  Y +  +K +
Sbjct: 245 -YADYGNSEQKAY 256


>gi|83312372|ref|YP_422636.1| membrane-fusion protein [Magnetospirillum magneticum AMB-1]
 gi|82947213|dbj|BAE52077.1| Membrane-fusion protein [Magnetospirillum magneticum AMB-1]
          Length = 436

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 5/110 (4%)

Query: 6   WKNLKRNHPASLKRMTLLSI----IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           W  L R  P +  +  + SI    + +   I  ++L P+ +SV +  E++  +  V I+S
Sbjct: 149 WAVLHRPSPVTEWKRKVTSIPRYRLKLAAGIVLALLFPVRLSVLAPAEVVAHNPAV-IRS 207

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
           P  G+I+K  V     + +G  L   +    T  +++ K ++   +  +D
Sbjct: 208 PMDGVIEKVHVRPNQPVGEGDILFELDRTTLTGKLEVAKKALSTAQAELD 257


>gi|255599190|ref|XP_002537174.1| Alkaline protease secretion protein aprE, putative [Ricinus
           communis]
 gi|223517241|gb|EEF25210.1| Alkaline protease secretion protein aprE, putative [Ricinus
           communis]
          Length = 291

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 4/237 (1%)

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L M K L  +  +S  ++ + ER +     E+ E       + + I E   + +   A
Sbjct: 45  QELKMSKPLAAQGVMSDVEILRLERQLSDVKGEMDEARLAIPRLEQAIAEAKSKISASIA 104

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYAQQS 315
            +  + S DL   +   A   S  +I    R  +T + +P+ G I   +  +     Q  
Sbjct: 105 KFRSDASNDLNAARAELAS-TSATSIAAVDRLTRTEVRAPVTGFIKQLKVTTVGGVIQPG 163

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPI 373
             +M+IVP      I  K+ P  +  ++ G  ATV+   Y         A +E I  D I
Sbjct: 164 MEVMEIVPLEDTLLIETKIRPSDVGFIRPGQEATVKITAYDFSIFGGLDAEVENITADTI 223

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +++ +  ++     V  K T  + S   + +  G  A V       T+ Q ++ PI
Sbjct: 224 TTEKGDKSESFYLVRVRTKSTTFSASKKKLPIMPGMMATVHIRTGKKTILQYLLKPI 280


>gi|238023135|ref|ZP_04603561.1| hypothetical protein GCWU000324_03059 [Kingella oralis ATCC 51147]
 gi|237865518|gb|EEP66658.1| hypothetical protein GCWU000324_03059 [Kingella oralis ATCC 51147]
          Length = 392

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 54/106 (50%), Gaps = 11/106 (10%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +VS++GEI    N+V++ +  SG IKK  V+ G  + +G  +   +++   + ++ +K  
Sbjct: 47  TVSATGEIA-ATNLVDVGAQVSGQIKKMHVKIGDVVKEGDLIAEIDNVTQVNEVNTRKAQ 105

Query: 103 IKNLRCHIDTEKSALDFLNNKYD----------VLEKAFESREEQL 138
           ++  +  +++ + AL     KY           V ++ FE+ E+ L
Sbjct: 106 LQTYQAQLESAQVALKIAQRKYSRYKSLASADAVSKEEFEATEDSL 151


>gi|326625953|gb|EGE32298.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 425

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 33/290 (11%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---NLFE---KNAVS--QNDLNQ-Q 219
           +++R+  L +  L+++ S L+  LSS +K+L ++    N+     K  +S   N LN+ Q
Sbjct: 137 SQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTNFLNKKQ 196

Query: 220 ERIVYKSTL-ELRENIHEQKN----MLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             I  KS + ++  +I  +K+    ++  I  L +E  L  +   K IS++L++ +    
Sbjct: 197 TYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLS---KIISKNLQELEVV-- 251

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA---QQSQPLMKIVPHSKLTYIR 331
              S L ++EK   ++ I SP+ G ++Y  + S++ +    Q +  L +I P  +     
Sbjct: 252 --NSTLKVIEKQINEEDIYSPVDG-VIYKINKSATTHGGVIQAADLLFEIKPKVRTMLAD 308

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            K+ PK    +       +        + K + A I+ I P   +++     Q YY+VI 
Sbjct: 309 VKILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVI- 367

Query: 392 KITDLAFSDNNIELR---NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               +AF  N  +LR    G   +        ++ + ++ P+     K F
Sbjct: 368 ----IAFDVNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 413


>gi|262281524|ref|ZP_06059304.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter calcoaceticus RUH2202]
 gi|262257112|gb|EEY75850.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter calcoaceticus RUH2202]
          Length = 302

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 23/172 (13%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R +LE   +  R  L   Q++L M + L  K A S+ ++           L LR   ++ 
Sbjct: 153 RANLEQTLAGFRQALQLVQQELAMTEPLVAKGAASEVEV-----------LRLRREANDL 201

Query: 238 KNMLRHI-NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +N +  + N+ + EA  E    L + + D+E  Q+        L       ++    +P+
Sbjct: 202 RNKMNDVQNQYFVEAREE----LSKANTDIETQQQVVLGRSDSL-------DRAIFKAPV 250

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
            G I      +      Q+  LM IVP  +   I A++ P+ I  ++ G  A
Sbjct: 251 RGVIKEIAVTTHGGVIPQNGKLMTIVPIDEQLLIEARILPRDIAFIRPGQEA 302


>gi|90425983|ref|YP_534353.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90107997|gb|ABD90034.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 449

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 72/348 (20%), Positives = 135/348 (38%), Gaps = 45/348 (12%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETT-DLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            G++++  V  G+ + +G  L+   D  T  D + L++  + +L   I+T+ +       
Sbjct: 86  GGLVERIAVREGATVQKGDTLIVLRDAGTAEDDVALERQRV-DLLAQIETQVAL------ 138

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL-KMKLTRMRS-IYLNRLD 180
                   FE RE       G+Y     ++ N    +  ++L K + +R+ S I   R +
Sbjct: 139 --------FEGREPAFTSSNGRY--AVEEIANTNAFAAAKTLEKNEYSRLSSQIAQARYN 188

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQER---IVYKSTLELRENIHE 236
            E  +  L+  L   +    + K   +   +     L  +ER   +V   +        E
Sbjct: 189 REATAIQLKGALDEVENAERVSKRFADLMRIGVATGLQAEERRQAVVRARSAADAAASRE 248

Query: 237 QKNMLRHINELYDEANLEFANYLKEIS-------RDLEQNQRTFADEMSKLTILEKTREQ 289
           Q  +     E   E   +  +Y  E+        RDLE +       ++K    +  R+Q
Sbjct: 249 QGAI-----ERLGEVEKQLVSYGAELRSNRAQKVRDLEASLNVVDANIAK----KNQRKQ 299

Query: 290 K-TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + TI +P+A  +   +  S        Q L  +VP +        V   +I +++ G +A
Sbjct: 300 RLTITAPVAALVKSIEVNSIGQVVGSGQALATLVPLNTPLVAETSVRSSEIGYLRVGQSA 359

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
            +R   Y   R    + ++E I P   Q    +  Q YY V +K  D+
Sbjct: 360 QIRVGAYNFTRFGSLEGVVESISPSSFQ----IGGQYYYRVKIKPVDI 403


>gi|288963157|ref|YP_003453436.1| hypothetical protein AZL_f01320 [Azospirillum sp. B510]
 gi|288915409|dbj|BAI76892.1| hypothetical protein AZL_f01320 [Azospirillum sp. B510]
          Length = 486

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           ++ +P+ +S  +  EI   + V+ + +P  G+I++F V+    +  G PL +FE
Sbjct: 228 ALAIPVPMSTLAPAEIQTSNPVI-VAAPLDGVIERFHVQPNEAVAAGQPLFSFE 280


>gi|225677247|ref|ZP_03788235.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590712|gb|EEH11951.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 175

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + +L   GI G+  WS + PI+ +V +SGE++   N   ++    GII K  V+
Sbjct: 96  PLFFGLVVILIFFGIGGI--WSAIAPIDGTVHASGEVIVSSNRKIVQHLGGGIISKILVK 153

Query: 74  NGSQILQGTPLLTFEDI 90
            G  + +  PL+   D+
Sbjct: 154 EGQAVKKDEPLVLLSDV 170


>gi|295083898|emb|CBK65421.1| hypothetical protein [Bacteroides xylanisolvens XB1A]
          Length = 295

 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 87/193 (45%), Gaps = 28/193 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R DL  + +  +  + + +++   ++NL    A +Q  L+  +  V    L  
Sbjct: 76  MKSVENQRPDLAKQIAATKQQIVTAERERKRVENLLAAGAANQKQLDDWDAQV---KLLE 132

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R+ + ++ ++    N L ++ N         ++  + Q      D+++K           
Sbjct: 133 RQLVAQESSLRNSTNSLTEQGN--------SVAIQVAQ----VEDQLAKC---------- 170

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + SPIAGT++   +  +   A   +PL K+    ++ Y+RA +T +Q+  VK G   TV
Sbjct: 171 HVQSPIAGTVLAKYA-ETGELAAIGKPLFKVGEVDRM-YLRAYITSEQLSQVKLGDQVTV 228

Query: 351 RFPHYADIREKKF 363
            +  Y +  +K +
Sbjct: 229 -YADYGNSEQKAY 240


>gi|1173324|sp|Q08633|RTX3D_ACTPL RecName: Full=RTX-III toxin determinant D; AltName: Full=APX-IIID;
           AltName: Full=Cytolysin IIID; Short=CLY-IIID; AltName:
           Full=Toxin RTX-III secretion protein D
 gi|470687|gb|AAA21926.1| RTX toxin [Actinobacillus pleuropneumoniae serovar 2]
          Length = 477

 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 78/361 (21%), Positives = 152/361 (42%), Gaps = 76/361 (21%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           I  SI+  +EI  S++G+++   +  EIK   + ++K   V++G  + +G  LL      
Sbjct: 72  IVISIISKVEIVASATGKLVFSGHSKEIKPIENALVKDIFVKDGQFVEKGQLLL------ 125

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKS----ALDFLNN-KYDVLEKAFESREEQLLDF----- 141
                     ++  L C  D +K+     L+ L+  +Y  L  + E     LLDF     
Sbjct: 126 ----------NLTALGCDADKQKTKVSLGLERLDGYRYKSLLYSIEHNRLPLLDFNQADF 175

Query: 142 --------LGKYHSTCSKVFNYGISSVYRSL--KMKLTRMRSIYLNRLDLENKSSLLRAL 191
                    G  H    +   +      + L  + K    +++  N    E+ S + +  
Sbjct: 176 DSVQEEDKTGARHLITEQFETWQKQKYQKELAYQRKQAEKQTVLANIRKYESASRIEKEK 235

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQER---------IVYKSTL-ELRENIHEQKNML 241
           LS        +K L++  ++S+++L  QE           VY+S L E+  ++ + +  L
Sbjct: 236 LSD-------LKKLYDVKSISKHELLAQENRYVEASNELSVYQSHLKEVESDLLKAQEDL 288

Query: 242 RHINELYDEANLEFANYLKEISRDLEQN-QRTFADEMSKLTI-LEKTREQK---TILSPI 296
           + + +L+    LE           L+QN QR       +LT+ LEK  +++    I +P+
Sbjct: 289 KLVTQLFKSDILE----------KLQQNIQRE-----KQLTLELEKNEQRQLASIIRAPV 333

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FP 353
           +GT+   ++ +       ++ LM I P   +  + A +  K +  V+ G  A ++   FP
Sbjct: 334 SGTVQQLKTHTKGGVVTTAETLMVIAPEDDVLEVSALIQNKDVGFVEIGQEAVIKVETFP 393

Query: 354 H 354
           +
Sbjct: 394 Y 394


>gi|68171393|ref|ZP_00544786.1| secretion protein, HlyD family [Ehrlichia chaffeensis str. Sapulpa]
 gi|67999188|gb|EAM85845.1| secretion protein, HlyD family [Ehrlichia chaffeensis str. Sapulpa]
          Length = 197

 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 30/208 (14%)

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           + ++ NLE  +    I+ DL++  +T  D      IL++T     I SP AG I   +  
Sbjct: 1   MQNKINLELKDVTSAIT-DLKEKMKTAQD------ILDRT----IIRSPQAGIITGLKYH 49

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK---------------GYTATVR 351
           +         P+  +VP +    I AK+  + I+ +                 G  A VR
Sbjct: 50  TEGGVIPPGAPITNVVPLNDDLIIDAKIQTRHIEEILSAQMKDKNIVSYENYHGLKAKVR 109

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFP 410
              Y   +      I+ ++      + N ++   YY++ + I  + +    N++L  G P
Sbjct: 110 LSAYNIRKIGLVNGIVVQVSADALSEVNGMR---YYKIQVIIPKEQSAKLKNLKLYPGMP 166

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           AEV    ++ TL   +  PIT  + K F
Sbjct: 167 AEVFIITQSRTLFNYLFTPITSTFEKAF 194


>gi|134300786|ref|YP_001114282.1| RND family efflux transporter MFP subunit [Desulfotomaculum
           reducens MI-1]
 gi|134053486|gb|ABO51457.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           reducens MI-1]
          Length = 364

 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 6/95 (6%)

Query: 291 TILSPIAGTIVYNQSFSSSN-YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           TI SPIAG +V N+S ++    + Q   LM +   S + Y+   +  K +  +K G  A 
Sbjct: 177 TITSPIAG-LVANRSVTTGQMVSPQGSSLMSVEDLSSV-YVVVNIEQKDLSMIKPGLKAD 234

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           V    Y +   KKF  ++E ++P+  ++    +T+
Sbjct: 235 VTVDAYGN---KKFTGVVEVVNPVAKKEARVFETK 266


>gi|71083630|ref|YP_266350.1| AcrB-like protein [Candidatus Pelagibacter ubique HTCC1062]
 gi|91763333|ref|ZP_01265297.1| AcrB-like protein [Candidatus Pelagibacter ubique HTCC1002]
 gi|71062743|gb|AAZ21746.1| AcrB-like protein [Candidatus Pelagibacter ubique HTCC1062]
 gi|91717746|gb|EAS84397.1| AcrB-like protein [Candidatus Pelagibacter ubique HTCC1002]
          Length = 444

 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           ++LPI I+ ++  E++ + N   + SPF G++K     N  +I QG  L+  EDIE
Sbjct: 192 LILPIRITSTAPVEVIAK-NPSLVTSPFDGVVKNIVASNNDKIKQGDLLVLLEDIE 246


>gi|329957971|ref|ZP_08298403.1| hypothetical protein HMPREF9445_03288 [Bacteroides clarus YIT
           12056]
 gi|328522120|gb|EGF49236.1| hypothetical protein HMPREF9445_03288 [Bacteroides clarus YIT
           12056]
          Length = 297

 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I+SP+ GT++   +  +   A    PL KI    ++ Y+RA +T +Q+  V+ G   TV 
Sbjct: 176 IISPLTGTVLAKYA-EAGELAAPGTPLFKIADMEQI-YLRAYITSEQLSEVQLGQKVTVY 233

Query: 352 FPHYADIREKKFKAII 367
             +  D+R K++  I+
Sbjct: 234 SDYGKDVR-KEYPGIV 248


>gi|229136635|ref|ZP_04265315.1| hypothetical protein bcere0014_54590 [Bacillus cereus BDRD-ST196]
 gi|228646830|gb|EEL02985.1| hypothetical protein bcere0014_54590 [Bacillus cereus BDRD-ST196]
          Length = 434

 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 69/354 (19%), Positives = 155/354 (43%), Gaps = 17/354 (4%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+RN P  +  +     + ++G I W+ +  ++I    +  +  + N+  I++   GI+ 
Sbjct: 14  LERNPPRFIAILLSALFLCLLGFIVWAYVGKMDIVSKGTAIVEGKSNISTIRTQILGIVD 73

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V++G ++ +G  LL  ++ E   LI  K+  + ++  H++ +K+ L+ L    +  E
Sbjct: 74  TVSVQSGDEVKKGEVLLQLKNQE---LIG-KQNQLNDIIKHVEEQKAMLEQLKKSIES-E 128

Query: 129 KAF--ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           KA   E  ++++ D    Y      +     + +   +  KL+  +   L  L +E K +
Sbjct: 129 KALFSEGLDQKIRDEYKAYEQGYQALEKEQENEIKSLMNNKLSNEQDEVLQGLLVE-KEN 187

Query: 187 LLRALLSSH---QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + R L S+    QK+  + + +   N   Q+ L  Q+  V K   + +  +  ++N +  
Sbjct: 188 IQRELKSTQKQKQKEQLLPEQIDPLNEKIQS-LEAQQTSVEKRIEQRKVTLESERNKIES 246

Query: 244 INELYDE----ANLEFA-NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             E   E    A L++  N +  +++ ++  ++    +  +L  L    E   I +P  G
Sbjct: 247 AKEGKQEQKKYALLQYKENAIVSVNQRIQSVEQELFVKKQELNSLHHQSETTVIKAPTDG 306

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            I  +    + +     Q ++ I+P      I+  +  ++++ +KKG      F
Sbjct: 307 IIQLSSILQTGDLVDPGQEVISIIPKESSKKIKVLLPAQEVKGIKKGDKVQYSF 360


>gi|116750737|ref|YP_847424.1| secretion protein HlyD family protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699801|gb|ABK18989.1| secretion protein HlyD family protein [Syntrophobacter fumaroxidans
           MPOB]
          Length = 423

 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 36/200 (18%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           +L+N  S + A L+  Q+D     NL++  A ++    QQE    ++   LR+   +   
Sbjct: 153 ELKNTRSAVAADLAQFQRDFERFDNLYKTGAGTR---RQQE----QALTALRKAQAQLAA 205

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD------EMSKLTILEKTREQK--- 290
               I  L  EA+L  A   +++ R   Q Q   +D      +  +L  L   R++    
Sbjct: 206 ADSQI--LATEASLAAAT--QQVERAGAQFQVAQSDRDNVEIQQYRLASLRAGRDKSSAE 261

Query: 291 -----------TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                      TI +PI G I   +S       Q  QPLM +VP   + Y+ A     Q+
Sbjct: 262 LEAARLNLSYCTITAPIDGFIA-QKSVQVGARVQPGQPLMAVVPLQDI-YVEANYKETQL 319

Query: 340 QHVKKGYTATVR---FPHYA 356
           ++V+ G  A++R   +P ++
Sbjct: 320 KNVRLGQPASIRADIYPGWS 339


>gi|317970190|ref|ZP_07971580.1| HlyD family secretion protein [Synechococcus sp. CB0205]
          Length = 465

 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 19  RMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R++L  + G   L + W+ L P+   V +SGE++ E  V  ++    GI+ K  V +G +
Sbjct: 63  RLSLYFLGGAAALFVPWAALTPLTQVVQASGEVVPEGAVNVVQHLEGGIVSKVDVRDGQE 122

Query: 78  ILQGTPLL 85
           + +G  LL
Sbjct: 123 VKEGEVLL 130


>gi|307822598|ref|ZP_07652829.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
 gi|307736202|gb|EFO07048.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
          Length = 338

 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 34/163 (20%), Positives = 73/163 (44%), Gaps = 17/163 (10%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           QKDL  + NL ++ + ++  L++ +    ++  ELR +                 A+ E 
Sbjct: 129 QKDLQRVNNLIDRGSAARQSLDKVQSESKQAAAELRGS--------------QASASAEH 174

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            N L  +  ++ + +    +  ++LT+ +   E   + +P+ G I+ N+        +  
Sbjct: 175 -NQLATLDIEITETEARLENAQAQLTLAKIDLEHTQVKAPVDG-IIGNRGVQLGQLVRPG 232

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
             L  +V +SK+ ++ A     Q+QH++ G   TV+   Y D+
Sbjct: 233 VALASLVQNSKI-WVEANFKETQLQHMRLGQPVTVKVDAYPDL 274


>gi|213583136|ref|ZP_03364962.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 319

 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 130/290 (44%), Gaps = 33/290 (11%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---NLFE---KNAVS--QNDLNQ-Q 219
           +++R+  L +  L+++ S L+  LSS +K+L ++    N+     K  +S   N LN+ Q
Sbjct: 31  SQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTNFLNKKQ 90

Query: 220 ERIVYKSTL-ELRENIHEQKN----MLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             I  KS + ++  +I  +K+    ++  I  L +E  L  +   K IS++L++ +    
Sbjct: 91  AYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLS---KIISKNLQELEVV-- 145

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA---QQSQPLMKIVPHSKLTYIR 331
              S L ++EK   ++ I SP+ G ++Y  + S++ +    Q +  L +I P  +     
Sbjct: 146 --NSTLKVIEKQINEEDIYSPVDG-VIYKINKSATTHGGVIQAADLLFEIKPKVRTMLAD 202

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            K+ PK    +       +        + K + A I+ I P   +++     Q YY+VI 
Sbjct: 203 VKILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVI- 261

Query: 392 KITDLAFSDNNIELR---NGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               +AF  N  +LR    G   +        ++ + ++ P+     K F
Sbjct: 262 ----IAFDVNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 307


>gi|319410986|emb|CBY91383.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis WUE 2594]
 gi|325133624|gb|EGC56282.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M13399]
 gi|325145074|gb|EGC67357.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M01-240013]
 gi|325205552|gb|ADZ01005.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M04-240196]
          Length = 475

 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 132/352 (37%), Gaps = 62/352 (17%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET- 92
           WS    I+I  ++SG+ ++      I+   + ++K   V +G  + QG  L   E + T 
Sbjct: 72  WSWFGKIDIVAAASGKTVSGGRSKTIQPLETVVVKAVHVRDGQHVKQGETLAELEAVGTD 131

Query: 93  TDLID----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +D++     L+   +  LR                Y+ +  A ESR    +D        
Sbjct: 132 SDVVQSEQALQAAQLSKLR----------------YEAVLAALESRTVPHIDM------- 168

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++  + G+S         L + +       D +     L++ L  HQ +L   K   E+
Sbjct: 169 -AQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQ-----LQSALRGHQAELQSAKAQ-EQ 221

Query: 209 NAVSQNDLNQQERIVYK-----------STLELRE-------NIHEQKNMLRHINELYDE 250
             VS   + QQ+   Y+           + LE +        ++   +  +R I     +
Sbjct: 222 KLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQAAIAQ 281

Query: 251 ANLEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQ-KTILSPIAGTIVYNQS 305
           A        + + RD    L Q      D+    T   K R+Q  TI SP  GT+    +
Sbjct: 282 AEQNRVLNTQNLKRDTLDALRQANEQI-DQYRGQTDKAKQRQQLMTIQSPADGTVQELAT 340

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           ++     Q +Q +M + P      +   V  K I  V++G  A V+   FP+
Sbjct: 341 YTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY 392


>gi|15837818|ref|NP_298506.1| colicin V secretion protein [Xylella fastidiosa 9a5c]
 gi|9106190|gb|AAF84026.1|AE003955_7 colicin V secretion protein [Xylella fastidiosa 9a5c]
          Length = 420

 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 66/362 (18%), Positives = 144/362 (39%), Gaps = 60/362 (16%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           S +G+++    +V + +P +G++ + +V  G+  L G  L          L+ + + ++ 
Sbjct: 57  SVTGQLVPSKGLVTVVAPATGMVSQIKVSEGANALSGQIL---------ALVTVPRTTLA 107

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           +                +    LE+  + R+ Q L    +  +        GI +   + 
Sbjct: 108 S---------------GDATRALEQQLQERK-QGLSMGQQAQAQVLSAQTSGIEAQLSAA 151

Query: 165 KMKLTRMR---SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           + +L ++    +    ++ + N++             L  +K L +   V    + QQE 
Sbjct: 152 QRELAQIEIEIATRQKQIQIANET-------------LQRLKQLEDARYVGTLQIKQQES 198

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL- 280
            V   T ++ + +  Q  M R        +  +    L+E+    + +Q T+  E+++L 
Sbjct: 199 TVLDYTSQM-QAMQRQAIMTRR-------SIAQLQQSLRELPGQYQNSQATYRRELAQLE 250

Query: 281 --TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
              +  + R   +++SPI G IV  Q   S    Q  QP++ ++P +        +    
Sbjct: 251 QEKVETEARGALSVVSPIDG-IVATQIVKSQQTVQAGQPMLSLLPVNGELEAELLLPSSA 309

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQ-----DNNLQTQEYYEVIL 391
           I  +++G    +R+  Y   +    +  + +I    + S +      N  QTQ YY VI+
Sbjct: 310 IGFIEQGDEVRLRYQAYPYQKFGHQRGQVSRITRSALTSNELGALIGNTQQTQPYYRVIV 369

Query: 392 KI 393
           K+
Sbjct: 370 KL 371


>gi|213424850|ref|ZP_03357600.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
 gi|213612894|ref|ZP_03370720.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
 gi|213852844|ref|ZP_03382376.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
 gi|289824495|ref|ZP_06544058.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
          Length = 396

 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 23/196 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHE 236
           R  L +  + LR  L+S  K+LT+ + L +  A S  ++ + +R   KS L L+  ++  
Sbjct: 153 RAQLADTEAELRDALASVNKELTITQRLEKSGAASHVEVLRLQR--QKSDLGLKITDLRS 210

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q  +     E   +AN E  + L  I +  E       D +++LTI           SP+
Sbjct: 211 QYYV--QAREALSKANAEV-DMLSAILKGRE-------DSVTRLTIR----------SPV 250

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   Q  +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y 
Sbjct: 251 RGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYD 310

Query: 357 DIREKKFKAIIEKIDP 372
                    ++E I P
Sbjct: 311 YAIYGGLDGVVETISP 326


>gi|170722697|ref|YP_001750385.1| RND family efflux transporter MFP subunit [Pseudomonas putida W619]
 gi|169760700|gb|ACA74016.1| efflux transporter, RND family, MFP subunit [Pseudomonas putida
           W619]
          Length = 409

 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 4/102 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV++ G  L     V++ +  SG I+K  VE G Q+  G  L+  +       +D  
Sbjct: 64  IESSVTALG-TLQPRRYVDVGAQASGQIRKLHVEAGDQVHTGQLLVEIDPSTQQARLDAG 122

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDV---LEKAFESREEQL 138
           + SI NL+  +  +++       +Y     L  A  +REE L
Sbjct: 123 RFSIDNLKAQLAEQRAQYLLATQQYRRQRELAGAGATREEDL 164


>gi|225677245|ref|ZP_03788234.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590714|gb|EEH11952.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 249

 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 71/185 (38%), Gaps = 30/185 (16%)

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N+  + AN E    LKE+S        + AD   +L + E +  +  I SP  G +   +
Sbjct: 75  NDSQERANAE----LKEVST-------SIADLKERLMVAEDSLARTIIKSPQDGIVTDIR 123

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV----KK-----------GYTAT 349
             +     Q   P+M +VP      I AK+  + I+ +    KK           G    
Sbjct: 124 YHTEGGVIQSGVPIMSVVPSDDDLIIDAKIQTRNIEEILSAQKKDSNIVSIDGLEGLKVK 183

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNG 408
           VR   Y+  R      I+  I P      ++ +   YY V + I     +   N+ L  G
Sbjct: 184 VRLSAYSARRLSLINGIVSNISP---DALDDPRLGRYYSVRVVIPKPELAQFKNVYLYPG 240

Query: 409 FPAEV 413
            PAEV
Sbjct: 241 MPAEV 245


>gi|308189202|ref|YP_003933333.1| type I secretion membrane fusion protein [Pantoea vagans C9-1]
 gi|308059712|gb|ADO11884.1| putative type I secretion membrane fusion protein [Pantoea vagans
           C9-1]
          Length = 393

 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 1/151 (0%)

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R  N+L  + N    NY+ +   +L +     A + S +     + ++  +++P+ G + 
Sbjct: 193 RQANDLQSKLNDAENNYIVQAREELAKANAEAASQRSIIIGRADSLKRTVVVTPVRGIVK 252

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +  +      Q   LM+IVP  +   I A++ P+ +  +  G  A V+   Y      
Sbjct: 253 DIEVNTVGGVIPQRGNLMEIVPLDEQLMIEAQIAPRDVAFITPGQRAVVKLTAYDYNIYG 312

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
             +  +  I P  + QD   + Q YY V ++
Sbjct: 313 GLEGKVASISP-DTIQDEVHRDQYYYRVYIR 342


>gi|78779566|ref|YP_397678.1| leukotoxin secretion protein-like [Prochlorococcus marinus str. MIT
           9312]
 gi|78713065|gb|ABB50242.1| leukotoxin secretion protein-like protein [Prochlorococcus marinus
           str. MIT 9312]
          Length = 317

 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 7/155 (4%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISR--DLEQNQRTFADEMSKLTILEKT 286
           EL  +I  +K +L+ I+ L D   ++   YL++ ++  +L   ++    E+ +L      
Sbjct: 105 ELESSIQSEKEILKEISILADAGGIQKLQYLQQKNKVSELGYEKKQVEAEIKELNF---D 161

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           + +  ++SP+ G +    S S    A Q + L+KIVP    T  +  +    I  VK   
Sbjct: 162 KSKTLLVSPVKGKVFNLISVSKGFAANQGETLLKIVPSGD-TEAKIFLKNSDIGFVKSNM 220

Query: 347 TATVRFPHYADIREKKFKAIIEKI-DPIISQQDNN 380
            A +R   +   +    + I++ I D +I     N
Sbjct: 221 KAKIRVDAFPFTQFGSIEGILKSIGDEVIRSNQQN 255


>gi|238785608|ref|ZP_04629587.1| Hemolysin transport protein [Yersinia bercovieri ATCC 43970]
 gi|238713495|gb|EEQ05528.1| Hemolysin transport protein [Yersinia bercovieri ATCC 43970]
          Length = 461

 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 70/335 (20%), Positives = 136/335 (40%), Gaps = 35/335 (10%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WSI+  ++I  S++G+++  ++   I+    G++    V +G ++  G  LL    I   
Sbjct: 65  WSIVGKLDIHASANGKVIVSEHSKVIQPLEPGVVAAINVRDGDRVEAGQVLLELNPIG-- 122

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             ID +  +I     H   E + +  L +     +  F S  +   D L    +   K  
Sbjct: 123 --IDAELGNINKQLIHRLLEAARMVALLSSDP--QAHFVSPPDTPEDLLLMTQALLRKEH 178

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +   + + R    +      I     ++ N+  L++ +   HQ+ L  ++ L +  ++++
Sbjct: 179 DEVNAELARMASEQAVNQAHIAAGIANIANQKVLMKNI---HQR-LQALRTLAKSKSIAE 234

Query: 214 NDLNQQERIVYKSTLELRENIHEQ-----------KNMLRHINELYDEANLEFANYLKEI 262
            +L  QER    ++ E      EQ           +  L ++ E    +  E  N   E+
Sbjct: 235 VELLVQEREWLNASAEASRFQSEQAILEAKTRNLTQTRLHYLAE-KKRSYQERLNKAHEV 293

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              LEQ Q         + ++EK R+Q+ + +P+AG I      +       +QPLM +V
Sbjct: 294 INQLEQEQ---------IKLMEKQRQQR-LRAPVAGVIQQLAVHTLGGVVTAAQPLMVLV 343

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           P +    +   V  K +  V  G    V+   FP+
Sbjct: 344 PENHPLELDVMVLNKDVGFVLPGQAVEVKVDSFPY 378


>gi|16761544|ref|NP_457161.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29143015|ref|NP_806357.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|25512998|pir||AG0835 probable type I secretion protein STY2878 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503845|emb|CAD05870.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138648|gb|AAO70217.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 387

 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 23/196 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHE 236
           R  L +  + LR  L+S  K+LT+ + L +  A S  ++ + +R   KS L L+  ++  
Sbjct: 144 RAQLADTEAELRDALASVNKELTITQRLEKSGAASHVEVLRLQR--QKSDLGLKITDLRS 201

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q  +     E   +AN E  + L  I +  E       D +++LTI           SP+
Sbjct: 202 QYYV--QAREALSKANAEV-DMLSAILKGRE-------DSVTRLTIR----------SPV 241

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   Q  +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y 
Sbjct: 242 RGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYD 301

Query: 357 DIREKKFKAIIEKIDP 372
                    ++E I P
Sbjct: 302 YAIYGGLDGVVETISP 317


>gi|224823499|ref|ZP_03696608.1| type I secretion membrane fusion protein, HlyD family [Lutiella
           nitroferrum 2002]
 gi|224603954|gb|EEG10128.1| type I secretion membrane fusion protein, HlyD family [Lutiella
           nitroferrum 2002]
          Length = 472

 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 20/169 (11%)

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDEANL 253
           K+L + + L +  AVS  DL + ER V +   E       I + +  +       +E  L
Sbjct: 231 KELQVTRPLKDSGAVSDVDLLRLERDVSRFRGERDMAAAQIPKIQAAIAEAQRKIEEVEL 290

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTR-------EQKTILSPIAGTIVYNQSF 306
            F N          Q     ++ + KL+ L +TR       +   + SP+ GT+      
Sbjct: 291 SFRN----------QASAELSETLGKLSSLTETRVALNDRVKLAELRSPVNGTVKQLLVN 340

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           +     Q  + +++IVP      + A++ P+ I  +  G  A VRF  Y
Sbjct: 341 TIGGVVQPGKDIVEIVPTEDTLLLEARILPRDIAFLHPGQKAFVRFTAY 389


>gi|224535346|ref|ZP_03675885.1| hypothetical protein BACCELL_00208 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224523035|gb|EEF92140.1| hypothetical protein BACCELL_00208 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 464

 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTAT 349
            I++PI+G I + Q +S +      +P+  IVP  K L   +A +  ++   VK G T  
Sbjct: 318 VIIAPISGQITFTQYWSINQNIASGEPIFNIVPEEKGLLMGKALLPAERSGKVKIGQTVN 377

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQ 376
           V F ++ +      K +I+ I  + S+
Sbjct: 378 VSFDNFPNNEFGIVKGVIKNISLVPSE 404


>gi|325971411|ref|YP_004247602.1| efflux transporter RND family, MFP subunit [Spirochaeta sp. Buddy]
 gi|324026649|gb|ADY13408.1| efflux transporter, RND family, MFP subunit [Spirochaeta sp. Buddy]
          Length = 311

 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 20/174 (11%)

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           ++Y E N         + + +E++Q     + S+  +   T +Q  I +P+AGTI+    
Sbjct: 82  DVYSEVNGTLTTLSVSLGQRVEKDQVLGTVDPSRAGV---TYKQSVIKAPVAGTILLLPF 138

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
              SN + Q+ P+ +I     L  +   +  + I  V  G  A + F  + D   + F+A
Sbjct: 139 VQGSNVSMQA-PIARIGLLEDLEVV-LDIAERHIGTVGIGTKAELSFKAFDD---QVFQA 193

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG-FPAEVLFTAK 418
            + ++ P+++     L      E+ LK+      D   ++++G FP+ VLFT +
Sbjct: 194 EVIRLSPVLNPATRTL------EIALKL-----QDPEGKVKSGMFPSVVLFTER 236


>gi|323138840|ref|ZP_08073903.1| efflux transporter, RND family, MFP subunit [Methylocystis sp. ATCC
           49242]
 gi|322395882|gb|EFX98420.1| efflux transporter, RND family, MFP subunit [Methylocystis sp. ATCC
           49242]
          Length = 419

 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 19/167 (11%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD---------EMSKLTI 282
           + +     ML   +  +  A  EF   L+       + QRT  +         ++ K TI
Sbjct: 119 QKVKAGDPMLSIYSPAFFAAQREFLAALQYSRSSPSEAQRTVVETTRQRLALWDVPKSTI 178

Query: 283 --LEKT-REQKTIL--SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
             LE+T +  K+++  SPI GTI+  ++F       Q++ L  +   S + +++AK+   
Sbjct: 179 DELERTGKPSKSLILRSPITGTILEKKAFQGQYVMPQAE-LYNVADLSTV-WVQAKIFAY 236

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           ++ HV  G  A V FP  A+   + F   +  I+P++ +    +Q +
Sbjct: 237 ELPHVVLGMPAKVTFPSLAN---RPFDGKVVFIEPVVEEAARTVQVR 280


>gi|15987945|gb|AAL12807.1| LktD [Mannheimia glucosida]
 gi|15987952|gb|AAL12812.1| LktD [Mannheimia glucosida]
          Length = 472

 Score = 38.1 bits (87), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 74/353 (20%), Positives = 153/353 (43%), Gaps = 29/353 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +EI  ++ G++       EIK   + I+++  V++G  + +G  L++   + +       
Sbjct: 80  VEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQFVEKGQLLVSLTALGS------- 132

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK----VFNY 155
           +  IK     +  EK      N +Y  L  A E+    ++D      +  S+       +
Sbjct: 133 EADIKKTIASLSLEK----LENYRYQTLLTAIENESLPVIDLSKTEFNDSSEEDRLRIKH 188

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENK--SSLLRALLSS---HQKDLTMMKNLFEKNA 210
            I   Y + + + T+ +++   R D E +  S+ +R    +    Q+ L   K L+++ +
Sbjct: 189 LIEEQYTTWQKQKTQ-KTLAYKRKDAEKQTTSAYVRKYEGATRIEQEKLKDFKALYQQKS 247

Query: 211 VSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEF-ANYLKEISRDL 266
           +S+++L  QE    ++  EL   R  ++E +N L ++ E  +     F ++ L+++ + +
Sbjct: 248 LSKHELLSQENKAIEAQNELAVYRSKLNELENDLLNVKEELELITQFFKSDVLEKLKQHI 307

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           E N+R    E+ K     + R+   I +P++GT+   +  +       ++ LM IVP   
Sbjct: 308 E-NERQLRLELEKNN---QRRQASMIRAPVSGTVQQLKIHTIGGVVTTAETLMIIVPEDD 363

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +    A V  K I  V  G    ++   +   R       I+ I P   +Q N
Sbjct: 364 VLEATALVQNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHISPDAIEQPN 416


>gi|22126207|ref|NP_669630.1| hypothetical protein y2322 [Yersinia pestis KIM 10]
 gi|108807367|ref|YP_651283.1| hypothetical protein YPA_1371 [Yersinia pestis Antiqua]
 gi|108811632|ref|YP_647399.1| hypothetical protein YPN_1469 [Yersinia pestis Nepal516]
 gi|149366080|ref|ZP_01888115.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|165926483|ref|ZP_02222315.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165938901|ref|ZP_02227455.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166009423|ref|ZP_02230321.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210791|ref|ZP_02236826.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401377|ref|ZP_02306874.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420429|ref|ZP_02312182.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167424508|ref|ZP_02316261.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167466848|ref|ZP_02331552.1| hypothetical protein YpesF_02910 [Yersinia pestis FV-1]
 gi|218929099|ref|YP_002346974.1| hypothetical protein YPO1989 [Yersinia pestis CO92]
 gi|229897397|ref|ZP_04512553.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229898040|ref|ZP_04513191.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901910|ref|ZP_04517031.1| putative exported protein [Yersinia pestis Nepal516]
 gi|294503939|ref|YP_003568001.1| hypothetical protein YPZ3_1829 [Yersinia pestis Z176003]
 gi|21959174|gb|AAM85881.1|AE013834_6 hypothetical [Yersinia pestis KIM 10]
 gi|108775280|gb|ABG17799.1| hypothetical protein YPN_1469 [Yersinia pestis Nepal516]
 gi|108779280|gb|ABG13338.1| hypothetical protein YPA_1371 [Yersinia pestis Antiqua]
 gi|115347710|emb|CAL20625.1| putative exported protein [Yersinia pestis CO92]
 gi|149292493|gb|EDM42567.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|165913264|gb|EDR31887.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165921704|gb|EDR38901.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165991978|gb|EDR44279.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207971|gb|EDR52451.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962124|gb|EDR58145.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167049073|gb|EDR60481.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167056390|gb|EDR66159.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229680806|gb|EEO76901.1| putative exported protein [Yersinia pestis Nepal516]
 gi|229689081|gb|EEO81146.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693734|gb|EEO83783.1| putative exported protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|262361940|gb|ACY58661.1| hypothetical protein YPD4_1753 [Yersinia pestis D106004]
 gi|262365921|gb|ACY62478.1| hypothetical protein YPD8_1795 [Yersinia pestis D182038]
 gi|294354398|gb|ADE64739.1| hypothetical protein YPZ3_1829 [Yersinia pestis Z176003]
 gi|320015336|gb|ADV98907.1| putative exported protein [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 720

 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGI K+F    G ++L  TP +  E   T +  +   VSI  + C+I+ +  ++D L N 
Sbjct: 501 SGIKKEFNDRTG-RLLTTTPYVNNEIQVTGETYNADGVSI--IHCYINNK--SIDSLYNP 555

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTC 149
            ++ EKA +S +    + LGKYH TC
Sbjct: 556 IEIREKASQSDDNAQYE-LGKYHYTC 580


>gi|110634270|ref|YP_674478.1| secretion protein HlyD [Mesorhizobium sp. BNC1]
 gi|110285254|gb|ABG63313.1| secretion protein HlyD [Chelativorans sp. BNC1]
          Length = 383

 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 48/225 (21%), Positives = 86/225 (38%), Gaps = 32/225 (14%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L   ++L  K   SQ+ L+Q ER + K+    RE++   +  +              A+ 
Sbjct: 161 LKRQQDLSGKGVASQSSLDQAERNLQKA----RESLSATRQAV--------------ASA 202

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTR---EQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           L  +  + +         +S L   +K      Q T+ +P  G I     F +  +    
Sbjct: 203 LAALGGNPKIETDKHPTVLSALAARDKAAYELAQTTVRAPADGIIAQASDFRNGQFVSTG 262

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            PL  +V  ++ +++ A     Q+ H+K G  A + F  Y D   +  +A +E I     
Sbjct: 263 TPLFSLV-ETRSSWVEANFKETQLTHMKPGQKAEIVFDTYPD---RPLEATVEDISAGTG 318

Query: 376 QQDNNLQTQEYYEVILKITD-------LAFSDNNIELRNGFPAEV 413
            + + L  Q      +K+T        L   +  + LR G  A V
Sbjct: 319 AEFSLLPAQNATGNWVKVTQRIPVRLKLQIEEPELLLRTGMSATV 363


>gi|317153169|ref|YP_004121217.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943420|gb|ADU62471.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 474

 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 20/82 (24%), Positives = 36/82 (43%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           I    W+   P++I   + GE++    V  I+    GI++K  V  G  +  G PL+  E
Sbjct: 26  ISFFVWASFSPLDIVSDAVGEVIPSSRVKRIQHLEGGIVRKIVVREGDLVEVGQPLIELE 85

Query: 89  DIETTDLIDLKKVSIKNLRCHI 110
              +   ++   V + +L   I
Sbjct: 86  TTASDSTVEELNVRVSSLTAEI 107


>gi|269120096|ref|YP_003308273.1| secretion protein HlyD [Sebaldella termitidis ATCC 33386]
 gi|268613974|gb|ACZ08342.1| secretion protein HlyD family protein [Sebaldella termitidis ATCC
           33386]
          Length = 349

 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 5/150 (3%)

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
           E ++L I E   EQ  + SPI G I           + Q    +  V   K  ++RA + 
Sbjct: 202 EKAELAIQEYLLEQAQLKSPIDGVIRSRLQEPGDMASPQQITFLLAVNDKK--WVRAYIQ 259

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            KQ+ ++ +G   +V    Y+D   K  K  I  I  +       +QT E    +L    
Sbjct: 260 EKQLGYINEGMEVSVYIDSYSD---KPIKGQIGYISSVAEFTPKTVQTAELRTSLLYEIR 316

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           +   D+   LR G PA +   + NT  ++E
Sbjct: 317 VYVKDSEDILRMGMPATIKINSYNTADSKE 346


>gi|270490908|ref|ZP_06207982.1| hypothetical protein YPD27_4517 [Yersinia pestis KIM D27]
 gi|270339412|gb|EFA50189.1| hypothetical protein YPD27_4517 [Yersinia pestis KIM D27]
          Length = 715

 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGI K+F    G ++L  TP +  E   T +  +   VSI  + C+I+ +  ++D L N 
Sbjct: 496 SGIKKEFNDRTG-RLLTTTPYVNNEIQVTGETYNADGVSI--IHCYINNK--SIDSLYNP 550

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTC 149
            ++ EKA +S +    + LGKYH TC
Sbjct: 551 IEIREKASQSDDNAQYE-LGKYHYTC 575


>gi|218768749|ref|YP_002343261.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis Z2491]
 gi|121052757|emb|CAM09102.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis Z2491]
          Length = 454

 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 74/352 (21%), Positives = 132/352 (37%), Gaps = 62/352 (17%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET- 92
           WS    I+I  ++SG+ ++      I+   + ++K   V +G  + QG  L   E + T 
Sbjct: 72  WSWFGKIDIVAAASGKTVSGGRSKTIQPLETVVVKAVHVRDGQHVKQGETLAELEAVGTD 131

Query: 93  TDLID----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +D++     L+   +  LR                Y+ +  A ESR    +D        
Sbjct: 132 SDVVQSEQALQAAQLSKLR----------------YEAVLAALESRTVPHIDM------- 168

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++  + G+S         L + +       D +     L++ L  HQ +L   K   E+
Sbjct: 169 -AQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQ-----LQSALRGHQAELQSAKAQ-EQ 221

Query: 209 NAVSQNDLNQQERIVYK-----------STLELRE-------NIHEQKNMLRHINELYDE 250
             VS   + QQ+   Y+           + LE +        ++   +  +R I     +
Sbjct: 222 KLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQAAIAQ 281

Query: 251 ANLEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQ-KTILSPIAGTIVYNQS 305
           A        + + RD    L Q      D+    T   K R+Q  TI SP  GT+    +
Sbjct: 282 AEQNRVLNTQNLKRDTLDALRQANEQI-DQYRGQTDKAKQRQQLMTIQSPADGTVQELAT 340

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           ++     Q +Q +M + P      +   V  K I  V++G  A V+   FP+
Sbjct: 341 YTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY 392


>gi|255691521|ref|ZP_05415196.1| putative ABC transport system, lipoprotein [Bacteroides finegoldii
           DSM 17565]
 gi|260622912|gb|EEX45783.1| putative ABC transport system, lipoprotein [Bacteroides finegoldii
           DSM 17565]
          Length = 311

 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 28/193 (14%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S+   R DL  + +  +  + + +++   ++NL    A +Q  L+  +  V    LE 
Sbjct: 92  MKSVENQRPDLAKQIAATKQQIVTAERERKRVENLLAAGAANQKQLDDWDAQV--KLLE- 148

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R+ + ++ ++    N L ++ N         ++  + Q      D+++K           
Sbjct: 149 RQLVAQESSLRNSTNSLTEQGN--------SVAIQVAQ----VEDQLAKC---------- 186

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + SPIAGT++   +  +   A   +PL K+    ++ Y+RA +T +Q+  VK G   TV
Sbjct: 187 HVQSPIAGTVLAKYA-EAGELAAIGKPLFKVGEVDRM-YLRAYITSEQLSKVKLGDQVTV 244

Query: 351 RFPHYADIREKKF 363
            +  Y +  +K +
Sbjct: 245 -YADYGNSEQKAY 256


>gi|54294454|ref|YP_126869.1| dihydrolipoamide acetyltransferase [Legionella pneumophila str.
           Lens]
 gi|53754286|emb|CAH15763.1| Pyruvate dehydrogenase (dihydrolipoyltransacetylase component) E2p
           [Legionella pneumophila str. Lens]
          Length = 544

 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 34/50 (68%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           ++I SP++G + + +++ G ++ QGTP+LT +    ++  D++K  IKN+
Sbjct: 165 MDIPSPYAGKVIEMKIKLGDKVSQGTPILTLKTPGKSETPDIEKSQIKNI 214


>gi|326316848|ref|YP_004234520.1| type I secretion membrane fusion protein, HlyD family [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323373684|gb|ADX45953.1| type I secretion membrane fusion protein, HlyD family [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 506

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 16/161 (9%)

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF----- 273
           Q+R+  +  +EL  ++  Q+  L        E       YL E  R L + Q        
Sbjct: 283 QDRM--RERIELERDLGTQQARLHEAQAALQETQQTRDAYLAETRRTLSERQSQAELKRL 340

Query: 274 --ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             A E +K  + E+     T+++P++GT+    + +      ++Q LM IVP     ++ 
Sbjct: 341 QSAQEWNKAALRERL---ATLVAPVSGTVQQLAAHTEGGVVTEAQALMVIVPDG--AHVS 395

Query: 332 AKVT--PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           A+VT   K I  V+ G   T++   +   R     A +E +
Sbjct: 396 AEVTLENKDIGFVEPGQDVTIKLETFPFTRYGTVPAHVETV 436


>gi|87118808|ref|ZP_01074707.1| putative toxin secretion transmembrane protein [Marinomonas sp.
           MED121]
 gi|86166442|gb|EAQ67708.1| putative toxin secretion transmembrane protein [Marinomonas sp.
           MED121]
          Length = 441

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 30/150 (20%), Positives = 62/150 (41%), Gaps = 7/150 (4%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P  G I+     +        Q ++ IVP      + A++  + I  +    TA VR
Sbjct: 293 IRAPKGGKIMDLGIHTIGGVLSPGQAILDIVPEEDELIVEARLQTQDIDKISMNQTAVVR 352

Query: 352 FPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNG 408
              ++     +   ++  +  D  I + +       +Y++ ++I  D     N + L  G
Sbjct: 353 MSAFSSRTTPELNGLVSGVSADSFIDETNG----MSFYKLRIRIPQDEMEKLNELVLMPG 408

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            PAEV    +  T+   ++ P++D+  + F
Sbjct: 409 MPAEVFVQTEARTMVSYLMKPLSDSALRAF 438


>gi|124021800|ref|YP_001016107.1| transporter component [Prochlorococcus marinus str. MIT 9303]
 gi|123962086|gb|ABM76842.1| possible transporter component [Prochlorococcus marinus str. MIT
           9303]
          Length = 391

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 9/155 (5%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           +Q+N +R +     +  L+ A     +++++EQ     A   ++LT  + T + +++ SP
Sbjct: 184 QQRNKVRELRGRVTKEKLDGARQQSILNQEIEQLNAQLAQLKAQLTEAKVTLKYQSLRSP 243

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +   +  +    AQ S+P++KIVP + L     ++   +I  V++G +  +    +
Sbjct: 244 VDGVVFDLKPTTPGFVAQSSEPVLKIVPFNNLEA-DVEIPSNKIGFVREGMSVDISIDSF 302

Query: 356 A----DIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
                 + E K  +I     P     D   Q QEY
Sbjct: 303 PATDFGVLEGKVTSIGSDALP----PDQQKQRQEY 333


>gi|82582330|gb|ABB84253.1| leukotoxin translocon membrane fusion protein [Mannheimia
           ruminalis]
          Length = 478

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 74/353 (20%), Positives = 153/353 (43%), Gaps = 29/353 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +EI  ++ G++       EIK   + I+++  V++G  + +G  L++   + +       
Sbjct: 80  VEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQFVEKGQLLVSLTALGS------- 132

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK----VFNY 155
           +  IK     +  EK      N +Y  L  A E+    ++D      +  S+       +
Sbjct: 133 EADIKKTIASLSLEK----LENYRYQTLLTAIENESLPVIDLSKTEFNDSSEEDRLRIKH 188

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENK--SSLLRALLSS---HQKDLTMMKNLFEKNA 210
            I   Y + + + T+ +++   R D E +  S+ +R    +    Q+ L   K L+++ +
Sbjct: 189 LIEEQYTTWQKQKTQ-KTLAYKRKDAEKQTTSAYVRKYEGATRIEQEKLKDFKALYQQKS 247

Query: 211 VSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEF-ANYLKEISRDL 266
           +S+++L  QE    ++  EL   R  ++E +N L ++ E  +     F ++ L+++ + +
Sbjct: 248 LSKHELLSQENKAIEAQNELAVYRSKLNELENDLLNVKEELELITQFFKSDVLEKLKQHI 307

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           E N+R    E+ K     + R+   I +P++GT+   +  +       ++ LM IVP   
Sbjct: 308 E-NERQLRLELEKNN---QRRQASMIRAPVSGTVQQLKIHTIGGVVTTAETLMIIVPKDD 363

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +    A V  K I  V  G    ++   +   R       I+ I P   +Q N
Sbjct: 364 VLEATALVQNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHISPDAIEQPN 416


>gi|183219627|ref|YP_001837623.1| putative signal peptide [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909766|ref|YP_001961321.1| efflux pump [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167774442|gb|ABZ92743.1| Efflux pump [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167778049|gb|ABZ96347.1| Conserved hypothetical protein; putative signal peptide [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 449

 Score = 38.1 bits (87), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 82/377 (21%), Positives = 148/377 (39%), Gaps = 68/377 (18%)

Query: 6   WKNLKRNHPA------SLKRMTLLSIIGIIGLITWSILL--PIEISVSSSGEI-----LN 52
           WK L++N P+      +L   +L  I+ II  ++  ILL  P + +    G +     L+
Sbjct: 9   WK-LRKNLPSYRLVQTALPAQSLAYILTIIFFLSVLILLYVPWQQTTMGFGRVVAYAPLD 67

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
              V+E  SP SG + K+ V  G+++ +G P++   DI   D          N    I  
Sbjct: 68  RQQVIE--SPISGRVVKWHVHEGTRVKKGDPII---DISDND---------PNFINRIRE 113

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           EK+AL         LE A  SRE+ +   +    S+     N   S   R + M   R+R
Sbjct: 114 EKNAL------LQRLEAA-RSREDNIRSRILSLRSSMGSAVNAADS---RRM-MAKDRVR 162

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE------------ 220
           +        E      +A L +   +L   K L+EK   S+  L   E            
Sbjct: 163 AS-------EQAVDAAKAALKTANLNLDRQKQLWEKGLTSKRTLELAELDHTNAETGLDR 215

Query: 221 -RIVYKSTLELRENIHEQKNMLRHINEL-YDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  Y + ++    ++     ++   E   ++A    A+   E++R LE        ++ 
Sbjct: 216 AKAAYDAAVKEERALNSDTGKVQQDAEASINDAKASLASAQSEVARVLE--------DLP 267

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           KL      +E + I +P  G I+       +   ++   +  +VP ++   +   ++   
Sbjct: 268 KLEARLSRQENQEIFAPRDGIIMRILVNPDTQQVKEGDGVAILVPDAEDKAVELFISGND 327

Query: 339 IQHVKKGYTATVRFPHY 355
           I  V +G    ++F  Y
Sbjct: 328 IPLVGEGRKVRLQFQGY 344


>gi|332667132|ref|YP_004449920.1| hypothetical protein Halhy_5221 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332335946|gb|AEE53047.1| hypothetical protein Halhy_5221 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 432

 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 73/334 (21%), Positives = 144/334 (43%), Gaps = 58/334 (17%)

Query: 14  PASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P+ + R   L+ + I  L+ W + L+     V +   ++++D  V + +P +  I +  V
Sbjct: 22  PSWMVRWGSLTALAIFVLLMWLAFLVKYPDVVEADIRLVSKDPPVRLTAPNAIRIDEVIV 81

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            N +Q+  G  LL F              S  N R H+ T +  +  L            
Sbjct: 82  RNNTQVDSGEALLAFR-------------STANFR-HVLTLEDYITALPG---------- 117

Query: 133 SREEQLLDF-------LGKYHSTCSKVFNYGI---SSVYRSLKMKLTRMRSIYLNRLD-- 180
            R+E LL F       LG+  +      +  I   S +Y++L     R     ++RLD  
Sbjct: 118 LRDEDLLKFKVPNNLVLGELQADLYDFQDVQIKYNSEMYKNLSTSDLRSSQSRISRLDRS 177

Query: 181 LENKSSL---LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           L+ +  +   +R  ++  +++    ++L   +  SQ+D+N+    V +  +EL       
Sbjct: 178 LDYQKEMRQQIREQIAEAEQERKNKEHLVSVDQASQDDVNK----VLRRIMEL------N 227

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRT-FADEMSKLTILE------KTREQK 290
           K + R  +E+ D  +   A  +K  S +   ++ T FA E+ + + L         ++Q 
Sbjct: 228 KELARTESEIRDRESEISALRIKVRSMESGADKETNFASEVLRESFLRLRAGVITWKQQH 287

Query: 291 TILSPIAGTI-VYNQSFSSSNYAQQSQPLMKIVP 323
            I +P +G + +  ++ S +N+  + +PL+ IVP
Sbjct: 288 IIEAPTSGLVQIIGRNVSENNFVYKDEPLLTIVP 321


>gi|255524059|ref|ZP_05391020.1| secretion protein HlyD family protein [Clostridium carboxidivorans
           P7]
 gi|296188484|ref|ZP_06856872.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
 gi|255512196|gb|EET88475.1| secretion protein HlyD family protein [Clostridium carboxidivorans
           P7]
 gi|296046748|gb|EFG86194.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
          Length = 326

 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 115/272 (42%), Gaps = 29/272 (10%)

Query: 133 SREEQLLDFLGKYHST-----CSKVFNYGISSVYRSLKMKLTRMRSI-YLNRLDLEN--- 183
           S   ++  F GK  +       SK+    ++ V   +  K+    SI YL+  DL+N   
Sbjct: 37  SAPREVFIFAGKIQADNSVNLSSKISPSKVTKVNVQVGSKVNAGDSIVYLDTTDLKNQQD 96

Query: 184 ---------KSSLLRALLSSHQKDLTMMKNLFEK-NAVSQNDLNQQERI--VYKSTLELR 231
                    K++L +    +  +D+++ +   +  N + +N LN   RI  +Y +  E +
Sbjct: 97  QAEAKVNTAKAALDKVQSKARPEDISIAEAAIDNDNKIYENALNNYNRIKKLYDTGNETK 156

Query: 232 ENIHEQKNMLRHINE--LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +N+ + +  L    +  + D+  L+  N      +++  ++    +  + +         
Sbjct: 157 QNLEQMEASLNTAKDKLISDKGTLDKLND-GATKQEIASSEALVNEAQAAVNSAASQVNN 215

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I SPI+GT V   +      A     L+KIV +++L YI   V     + +K G    
Sbjct: 216 GIITSPISGT-VSECNIHVGEIAGTGVTLVKIVGNNQL-YIDGYVPENVFKKIKVGEEVV 273

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V+     DI +K+FK  I  I+P +S    N+
Sbjct: 274 VKAD---DIPDKRFKGEISVINPTLSSNGKNV 302


>gi|170723544|ref|YP_001751232.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida W619]
 gi|169761547|gb|ACA74863.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida W619]
          Length = 394

 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 34/190 (17%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYK 225
           TR R +      +E+   L+R+       +L + +NL +  A S+ +   LN+Q     +
Sbjct: 149 TRRRGLEQTLAGIEDSLRLVRS-------ELQITENLAKMGASSRVEVIRLNRQ-----R 196

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           S LEL+ N      ++R   EL  +A+ E A+ L E+ R         +D +S+LT+   
Sbjct: 197 SELELKANEARSDYLVRAREELA-KASAE-ADSLSEVIRG-------RSDSLSRLTLR-- 245

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                   SP+ G +   +  +     Q    +MKIVP  +   I  ++ P+ I  +   
Sbjct: 246 --------SPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRDIAFIHPD 297

Query: 346 YTATVRFPHY 355
             A V+   Y
Sbjct: 298 QAAKVKISAY 307


>gi|294665798|ref|ZP_06731069.1| hemolysin secretion protein D [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604450|gb|EFF47830.1| hemolysin secretion protein D [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 473

 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 15/160 (9%)

Query: 204 NLFEKNAVSQND--LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            L E   V ++D  L +QERI  +S L        Q+N L+ I      A  E    + +
Sbjct: 237 RLVEGKYVGRHDYLLREQERIAAESQLA------TQRNRLQEIRSAISAAQEELRVLVTD 290

Query: 262 ISRDLEQNQRTFADEMSKLTI-LEKTREQKTILS---PIAGTIVYNQSFSSSNYAQQSQP 317
             +      R  +++  +LT  + KT ++  +++   P+ GT+      +       +QP
Sbjct: 291 TRQQALDALRQASEQAGQLTQDVAKTGQRDRLMALHAPVDGTVQQLAVHTVGGVVTPAQP 350

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           L+ +VP  +   +   V  K I  ++ G   TV+   FP+
Sbjct: 351 LLVVVPAEEALEVEVTVLNKDIGFMRPGQPVTVKVDSFPY 390


>gi|118589154|ref|ZP_01546561.1| Membrane-fusion protein [Stappia aggregata IAM 12614]
 gi|118438483|gb|EAV45117.1| Membrane-fusion protein [Stappia aggregata IAM 12614]
          Length = 439

 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 72/354 (20%), Positives = 144/354 (40%), Gaps = 46/354 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P + +R+  +  +     +TW+ +  +    +++GEI+    V  +     GI+ +  V 
Sbjct: 25  PVAYRRVLQVLSLTSAAFLTWAAIGQVREVANATGEIVPAGKVQTVGHLEGGIVAEVMVR 84

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +GTP++    +ET    DL+KV  +            L FL            +
Sbjct: 85  EGQLVEKGTPIVRL--LETATSSDLEKVQTR------------LKFL------------A 118

Query: 134 REEQLLD--FLGKYHSTCSKVFNYGIS----SVYRSLKMKLTRMRSIYLNRLD---LENK 184
            EEQ L    LG   +      + G S    + Y + ++ L + +     R+     E K
Sbjct: 119 TEEQRLGNPDLGTGANGLRLGADAGFSEAQQAAYDAQRLALEKEQQALKARVSEKQAELK 178

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRH 243
           S L R      Q ++   K   ++N   Q   +++  +  KS+L+  +  + E K M   
Sbjct: 179 SILERIAFQETQVEIEQEKYQIQENLFKQGYTSKRRFLDSKSSLQNAQSQLSELKGMSGS 238

Query: 244 INELYDE--ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-----ILSPI 296
           +     E  A+LE +  + E  + +E+++   A E S+L + E  +++       + +P+
Sbjct: 239 VTAQLTEATASLERSIAVAEEEQAVERSR--VAQERSEL-VFEADKQKDRFDRLFVRAPV 295

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +G +         +       + ++VP         +V+P+ I HV  G  A +
Sbjct: 296 SGHVKALYLKGPGSVLAPGDVVAEVVPSDSDLVAEVRVSPRDIGHVDVGDEAEI 349


>gi|212710542|ref|ZP_03318670.1| hypothetical protein PROVALCAL_01605 [Providencia alcalifaciens
          DSM 30120]
 gi|212686779|gb|EEB46307.1| hypothetical protein PROVALCAL_01605 [Providencia alcalifaciens
          DSM 30120]
          Length = 416

 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 31 LITWSILLPIEISVSSSGE--ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
          +I W  +   EI VSS G+  I    N +EI SP SG I +F+++ G  I +   L ++ 
Sbjct: 23 IIFWGYIFLAEIDVSSPGDGVISGLSNKLEIISPASGFINQFKIKTGDHIEKNQILFSYT 82

Query: 89 DIET 92
          +++ 
Sbjct: 83 NLDV 86


>gi|212634231|ref|YP_002310756.1| putative alkaline protease secretion protein [Shewanella
           piezotolerans WP3]
 gi|212555715|gb|ACJ28169.1| Probable alkaline protease secretion protein [Shewanella
           piezotolerans WP3]
          Length = 439

 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 9/156 (5%)

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           R+   I +  +GT+V     S        Q LM++VP +    + A V P+ I  V  G 
Sbjct: 286 RQHINIAAEHSGTVVAMAIHSIGAVISPGQILMELVPETDEMIVEAYVRPEDIDVVHAGL 345

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----EYYEVILKITDLAFSDNN 402
              VR   Y D R+    AI    + I    D    +     E Y V +K+     + +N
Sbjct: 346 LTQVRLTAY-DSRD----AIPMTGEVIHVSADRFFASAAGQPEGYLVKVKLNPTNSNHSN 400

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           I+L  G  A+V    +  TL + ++ P+  ++   F
Sbjct: 401 IKLHAGMSADVFIVLQPRTLLEYLLSPLGSSFELAF 436


>gi|68171179|ref|ZP_00544586.1| Biotin/lipoyl attachment:Carbamoyl-phosphate synthase L chain,
           ATP-binding:Carbamoyl-phosphate synthetase large chain,
           N-terminal:Biotin carboxylase, C-terminal [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|67999410|gb|EAM86052.1| Biotin/lipoyl attachment:Carbamoyl-phosphate synthase L chain,
           ATP-binding:Carbamoyl-phosphate synthetase large chain,
           N-terminal:Biotin carboxylase, C-terminal [Ehrlichia
           chaffeensis str. Sapulpa]
          Length = 655

 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 7/69 (10%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S LLPI   +S  GE L   NV    SP SG+I K  V+ G ++  G PLL  E ++  +
Sbjct: 571 SDLLPIMPQIS--GEELYSSNVC---SPISGMIVKIYVKQGEEVQPGQPLLVIEAMKMEN 625

Query: 95  LI--DLKKV 101
           +I  D+K +
Sbjct: 626 VIYSDVKSI 634


>gi|50084660|ref|YP_046170.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter sp. ADP1]
 gi|49530636|emb|CAG68348.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           (superfamily ABC, membrane) [Acinetobacter sp. ADP1]
          Length = 396

 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 76/394 (19%), Positives = 149/394 (37%), Gaps = 70/394 (17%)

Query: 8   NLKRNHPASLKRMTLLSIIGI--IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           N+    P   +   ++ I+GI  + L+ W+ +  +E   + +G+++       I+S   G
Sbjct: 13  NVSYKEPPLPRASLIIWIVGIALVILVVWAWVFKLEEVSTGTGKVIPSSKEQMIQSLDGG 72

Query: 66  IIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I+ K  V+ G  + +G  L   +         E+  L+   + +   LR  ++   + L 
Sbjct: 73  ILTKLDVKEGDIVQKGQILAQLDPTRFASNVGESQSLLMAAQATSARLRAEVNG--TPLA 130

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           F +   +V ++    +EE  L     Y+S                              R
Sbjct: 131 FPD---EVKQEPKLVQEETAL-----YNS-----------------------------RR 153

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            +LE   + L+  L   Q++L M + L  K A S+ ++           L L+       
Sbjct: 154 ANLEETVAGLKQALHLVQQELVMTEPLVAKGAASEVEV-----------LRLK------- 195

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
              R  N+L ++ N   ++Y  +   +L ++      +   +     T  +    +P+ G
Sbjct: 196 ---REANDLQNKINDARSSYYVKAREELSKSNTDVQTQQQVIKGRTDTLNRTVFKAPVRG 252

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +      +      Q+  LM IVP  +   I A++ P+ I  ++ G  A V+   Y   
Sbjct: 253 VVKEITVTTLGGVVPQNGKLMTIVPLDEQLLIEARILPRDIAFIRPGQEALVKITAYDYS 312

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
                K  +  I P  + +D   Q Q YY V ++
Sbjct: 313 IYGGMKGKVTVISP-DTIRDEVKQDQFYYRVYIR 345


>gi|88658256|ref|YP_507303.1| propionyl-CoA carboxylase, alpha subunit [Ehrlichia chaffeensis
           str. Arkansas]
 gi|88599713|gb|ABD45182.1| propionyl-CoA carboxylase, alpha subunit [Ehrlichia chaffeensis
           str. Arkansas]
          Length = 655

 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 7/69 (10%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S LLPI   +S  GE L   NV    SP SG+I K  V+ G ++  G PLL  E ++  +
Sbjct: 571 SDLLPIMPQIS--GEELYSSNVC---SPISGMIVKIYVKQGEEVQPGQPLLVIEAMKMEN 625

Query: 95  LI--DLKKV 101
           +I  D+K +
Sbjct: 626 VIYSDVKSI 634


>gi|56476343|ref|YP_157932.1| type I secretion protein [Aromatoleum aromaticum EbN1]
 gi|56312386|emb|CAI07031.1| predicted gram-negative bacterial type I secretion protein
           [Aromatoleum aromaticum EbN1]
          Length = 457

 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 78/389 (20%), Positives = 150/389 (38%), Gaps = 46/389 (11%)

Query: 15  ASLKRMTLLSIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           A   R  L  +  ++GL+     WS +   ++ V++ G +  E +V  + +P  G +   
Sbjct: 27  AEPSRFGLALVAAVLGLVLSALVWSFVGRADVIVTAHGVLAPESDVRRVYAPIDGELADI 86

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVL 127
            +E G  + QG  L         +       +   L   +   D E+    F   K  +L
Sbjct: 87  YMEAGQPVSQGDVLARLNARGAVE------AATHALEAQLKLEDAEREWKQFPERKA-LL 139

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN--------RL 179
           E+   + ++Q+   L  +    ++    G + +  + + +L + RS   N        R+
Sbjct: 140 ERKVAALKQQIEAALQLHERRTAE----GTTKLAEAQRAQLQQARSELDNARRMRDSTRM 195

Query: 180 DLENKSSLLR----ALLSSHQKDLTMMKNLFEKNA--VSQNDLNQ------QERIVYKST 227
           +L+    LL       +S  Q +      L  +NA  V+Q+ L +      QE    ++T
Sbjct: 196 ELDRFQRLLALPGGGGVSELQVEAKKSAYLAAENALRVAQSRLGELDFRLSQE--TARAT 253

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           +EL     E    L  +   YD A  E AN   ++   L Q  R  A+   ++      +
Sbjct: 254 VELESGDQE----LTRLRIQYDAAAREIANEEDKLRLQL-QTARLAANAAERIRFENIDK 308

Query: 288 EQ-KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           +    I++P++G I    S    +  Q + PL  I P      ++  +  +    +++G 
Sbjct: 309 DNFLLIIAPVSGVITDVASTQPGDKIQANTPLGGIAPKDARAVLKMDIAERDRAFLREGL 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIIS 375
              ++F  +   R       +E I P  S
Sbjct: 369 PVKLKFNAFPYQRYGLIDGRLEFISPATS 397


>gi|28198408|ref|NP_778722.1| colicin V secretion protein [Xylella fastidiosa Temecula1]
 gi|182681050|ref|YP_001829210.1| colicin V secretion protein [Xylella fastidiosa M23]
 gi|28056478|gb|AAO28371.1| colicin V secretion protein [Xylella fastidiosa Temecula1]
 gi|182631160|gb|ACB91936.1| colicin V secretion protein [Xylella fastidiosa M23]
 gi|307579518|gb|ADN63487.1| colicin V secretion protein [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 420

 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 71/367 (19%), Positives = 142/367 (38%), Gaps = 70/367 (19%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           S +G+++    +V + +P +G++ + +V  G+  L G  +L    +  T L      +I+
Sbjct: 57  SVTGQLVPSKGLVTVVAPATGMVSQIKVSEGANALSGQ-ILALVTVPRTTLASGD--AIR 113

Query: 105 NLRCHIDTEKSALDFLNN-KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            L   +   K  L      +  VL       E QL                   S+  R 
Sbjct: 114 ALEQQLQERKQGLSMGQQAQAQVLSAQTSGIEAQL-------------------SAAQRE 154

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-------MKNLFEKNAVSQNDL 216
           L             ++++E         +++ QK + +       +K L +   V    +
Sbjct: 155 LA------------QIEIE---------IATRQKQIQIANETLQRLKQLEDARYVGTLQI 193

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            QQE  V   T ++ + +  Q  M R        +  +    L+E+    + +Q T+  E
Sbjct: 194 KQQESTVLDYTSQM-QAMQRQAIMTRR-------SIAQLQQSLRELPGQYQNSQATYRRE 245

Query: 277 MSKL---TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           +++L    +  + R   +++SPI G IV  Q   S    Q  QP++ ++P +        
Sbjct: 246 LAQLEQEKVETEARGALSVVSPIDG-IVATQIVKSQQTVQAGQPMLSLLPVNGELEAELL 304

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQ-----DNNLQTQEY 386
           +    I  +++G    +R+  Y   +    +  + +I    + S +      N  QT+ Y
Sbjct: 305 LPSSAIGFIEQGDEVRLRYQAYPYQKFGHQRGQVSRISRSALTSSELAALIGNTQQTEPY 364

Query: 387 YEVILKI 393
           Y VI+K+
Sbjct: 365 YRVIVKL 371


>gi|294497585|ref|YP_003561285.1| efflux transporter, RND family, MFP subunit [Bacillus megaterium QM
           B1551]
 gi|294347522|gb|ADE67851.1| efflux transporter, RND family, MFP subunit [Bacillus megaterium QM
           B1551]
          Length = 376

 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 8/75 (10%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK----VSIKNLRCHIDTEKSALDFL 120
           G +++F V  GS++ QGT L+T+E    +D +DL++    +  K+ +  ID+    L  L
Sbjct: 70  GEVERFHVTEGSRVQQGTSLVTYE----SDALDLEQEQNNLEKKSSQLQIDSVSKQLSNL 125

Query: 121 NNKYDVLEKAFESRE 135
           N K   LEK    +E
Sbjct: 126 NKKQKELEKEMSKQE 140


>gi|291543331|emb|CBL16440.1| type I secretion system ABC transporter, HlyB family [Ruminococcus
           sp. 18P13]
          Length = 1123

 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 4/99 (4%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +I  I W+ L  ++I V+SSG +    N+  + +  SG +K   VE G+ +  G  L+  
Sbjct: 759 LIAAIVWACLSKVDIVVTSSGTMQPVGNISSLNTYTSGTVKSINVEEGAYVKAGDVLIEL 818

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    T  ID+   ++   +  ++ +K     + N  DV
Sbjct: 819 D----TQSIDIDVEALSQQKEVLEAQKEIYTMIKNGEDV 853


>gi|159487233|ref|XP_001701638.1| uroporphyrinogen decarboxylase [Chlamydomonas reinhardtii]
 gi|158280857|gb|EDP06613.1| uroporphyrinogen decarboxylase [Chlamydomonas reinhardtii]
          Length = 394

 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 16/124 (12%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           ++ L + HP+  +R     +I  I L  W+   P        G IL  D    I +P  G
Sbjct: 78  YRELAKKHPSFRERSETTELIVEISLQPWNSFKP-------DGVILFSD----ILTPLPG 126

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-----SIKNLRCHIDTEKSALDFL 120
           I   F +++    +  TP+ T E ++    +D  KV     ++  LR  ++ + + L F+
Sbjct: 127 IGVNFDIDDNKGPIIDTPIRTLEQVKQLHAMDFSKVDFVGRALTQLRSEVNNQAAVLGFV 186

Query: 121 NNKY 124
            + +
Sbjct: 187 GSPW 190


>gi|83720021|ref|YP_443077.1| multidrug resistance protein [Burkholderia thailandensis E264]
 gi|167620243|ref|ZP_02388874.1| multidrug resistance protein [Burkholderia thailandensis Bt4]
 gi|257139307|ref|ZP_05587569.1| multidrug resistance protein [Burkholderia thailandensis E264]
 gi|83653846|gb|ABC37909.1| multidrug resistance protein [Burkholderia thailandensis E264]
          Length = 410

 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 32/189 (16%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ         
Sbjct: 106 NLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ--------- 156

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                    E I   ++ ++      D AN + A+     +R L  N  T A+  + L  
Sbjct: 157 ---------EEISHARDAVKAAQASLDAANQQLAS-----NRALTANT-TIANHPNVLAA 201

Query: 283 LEKTRE------QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
             K R+      + T+ +P+AG  V  +S           PLM +VP + + +I A    
Sbjct: 202 AAKVRDAYLNNARNTLPAPVAG-YVAKRSVQVGQRVSPGTPLMSVVPLNAV-WIDANFKE 259

Query: 337 KQIQHVKKG 345
            Q++H++ G
Sbjct: 260 VQLKHMRIG 268


>gi|319789769|ref|YP_004151402.1| biotin/lipoyl attachment domain-containing protein [Thermovibrio
           ammonificans HB-1]
 gi|317114271|gb|ADU96761.1| biotin/lipoyl attachment domain-containing protein [Thermovibrio
           ammonificans HB-1]
          Length = 381

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 4/64 (6%)

Query: 291 TILSPIAGTIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA- 348
            I SP+ GT+   + F ++N A ++  PLM ++P  K  Y+ A +  K ++ V+ G TA 
Sbjct: 242 VIPSPVEGTV--TKVFVTNNDAVREGDPLMLVLPKGKRVYVFANILHKDLERVRVGDTAR 299

Query: 349 TVRF 352
            +RF
Sbjct: 300 VIRF 303


>gi|59801782|ref|YP_208494.1| putative ABC transporter, periplasmic protein [Neisseria
           gonorrhoeae FA 1090]
 gi|59718677|gb|AAW90082.1| putative ABC transporter, periplasmic protein [Neisseria
           gonorrhoeae FA 1090]
          Length = 392

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI +  N+V + +  SG IKK  V+ G Q+ +G  +        T+ ID++
Sbjct: 43  ISRTVSATGEI-SPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTIDME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKY 124
           K  ++  +  + + + AL     KY
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKY 126


>gi|167582082|ref|ZP_02374956.1| multidrug resistance protein [Burkholderia thailandensis TXDOH]
          Length = 408

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 32/189 (16%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ         
Sbjct: 106 NLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ--------- 156

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                    E I   ++ ++      D AN + A+     +R L  N  T A+  + L  
Sbjct: 157 ---------EEISHARDAVKAAQASLDAANQQLAS-----NRALTGNT-TIANHPNVLAA 201

Query: 283 LEKTRE------QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
             K R+      + T+ +P+AG  V  +S           PLM +VP + + +I A    
Sbjct: 202 AAKVRDAYLNNARNTLPAPVAG-YVAKRSVQVGQRVSPGTPLMSVVPLNAV-WIDANFKE 259

Query: 337 KQIQHVKKG 345
            Q++H++ G
Sbjct: 260 VQLKHMRIG 268


>gi|326523579|dbj|BAJ92960.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 306

 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 14/138 (10%)

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +RE + E++ MLR + EL+ E  +     L +    +E+  R  AD   +        E 
Sbjct: 132 MREELDEERRMLR-VAELWREERVRM--KLADARAAVEEKLREVADAGDRAADAAAAAEG 188

Query: 290 KTILS--PIAGTI----VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            +  S  PI G      V  QS +SS + QQS    +   HS+    R +VT  +  H++
Sbjct: 189 CSCRSGSPIGGKASPASVGQQSPASSQHGQQSPQSGQ---HSQSR--RREVTGGENPHIR 243

Query: 344 KGYTATVRFPHYADIREK 361
           +G   +V FP    +R +
Sbjct: 244 RGIKGSVEFPRAVRVRPR 261


>gi|53802926|ref|YP_115389.1| branched-chain alpha-keto acid dehydrogenase subunit E2
          [Methylococcus capsulatus str. Bath]
 gi|53756687|gb|AAU90978.1| pyruvate dehydrogenase complex, E2 component, dihydrolipoamide
          acetyltransferase [Methylococcus capsulatus str. Bath]
          Length = 436

 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 16/43 (37%), Positives = 26/43 (60%)

Query: 52 NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
          ++   +EI SP+SG + +  V  GS++  GTP+L   + E TD
Sbjct: 42 SDKAAMEIPSPYSGTVTELHVRVGSKVSMGTPILQLREDEGTD 84


>gi|170078183|ref|YP_001734821.1| RND family efflux transporter MFP subunit [Synechococcus sp. PCC
          7002]
 gi|169885852|gb|ACA99565.1| efflux transporter, RND family, MFP subunit subfamily
          [Synechococcus sp. PCC 7002]
          Length = 420

 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 15/39 (38%), Positives = 24/39 (61%)

Query: 50 ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
          +L  DN+V +K    GII+  Q++ G  +  GTP+LT +
Sbjct: 61 VLEADNLVTLKPEVDGIIQAIQIQEGDTVTAGTPILTLK 99


>gi|113953775|ref|YP_730425.1| HlyD family secretion protein [Synechococcus sp. CC9311]
 gi|113881126|gb|ABI46084.1| HlyD family secretion protein domain protein [Synechococcus sp.
           CC9311]
          Length = 511

 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 23  LSIIGIIGLI--TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           L ++G   LI   W+ L PI   + +SGE++ + +V  I+    GI+    V+NG  + +
Sbjct: 112 LYVLGAAALIFFPWAALTPITQVIEASGEVIPQGSVNIIQHLEGGIVSSVNVKNGQSVSK 171

Query: 81  GTPLL 85
           G  LL
Sbjct: 172 GEALL 176


>gi|197285880|ref|YP_002151752.1| HlyD family toxin secretion protein [Proteus mirabilis HI4320]
 gi|194683367|emb|CAR44074.1| putative HlyD-family toxin secretion protein [Proteus mirabilis
           HI4320]
          Length = 454

 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 73/357 (20%), Positives = 157/357 (43%), Gaps = 38/357 (10%)

Query: 14  PASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P    R+  + I + +I  + W+ +  +++  S+ G+++      +I+      +    V
Sbjct: 37  PTPYSRIIAIIISLSVIIFLLWAYIGKLDVLSSAIGKLVVSGYSQQIQIYEHSRLSAIHV 96

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVL 127
           +NG Q+ +G  LLT + +   + I+  K  I+NL     R     + +  D +++ +++L
Sbjct: 97  KNGQQVTKGEALLTLDILGVDEEINNLKNKIENLLLLKIRYQALGQNTRPDTIDD-FNLL 155

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            K  E +E  LL +  K         N+  S +  + K KL   + I           + 
Sbjct: 156 NK--EKKEAVLLSY-QKEKDEFDASINHINSEIETNNKNKLLTHQEI-----------NS 201

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDL--NQQE-----RIVYKSTLELRENIHEQKNM 240
           L  L ++ +K   + K L++K  +S  +   N++E     +I+ + + EL     +++  
Sbjct: 202 LNELKNNIEKRFNIKKKLYDKKIISTMEFLENKKELLEINQIIKRKSSELVILSSQEQQY 261

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           +++ + L  + +LE+ +  K+    +   Q+        L  ++K ++ K + SP+ GT+
Sbjct: 262 IKNRDRLEKQKHLEWHDKFKQYESGVFIYQQN-------LYHVQKRQQLKIVRSPVTGTV 314

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
                 +     Q SQ +M IVP ++       +  K I  +  G  A ++   FP+
Sbjct: 315 QQLAVHTLGAVLQPSQAVMVIVPDTQHNVAEVNILNKDIGFIYPGQKAVIKIDAFPY 371


>gi|194469014|ref|ZP_03074998.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194455378|gb|EDX44217.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
          Length = 396

 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 23/196 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHE 236
           R  L +  + LR  L+S  K+LT+ + L +  A S  ++ + +R   KS L L+  ++  
Sbjct: 153 RAQLADTEAELRDALASVNKELTITQRLEKSGAASHVEVLRLQR--QKSDLGLKITDLRS 210

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q  +     E   +AN E  + L  I +  E       D +++LT+           SP+
Sbjct: 211 QYYV--QAREALSKANAEV-DMLSAILKGRE-------DSVTRLTVR----------SPV 250

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   Q  +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y 
Sbjct: 251 RGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYD 310

Query: 357 DIREKKFKAIIEKIDP 372
                    ++E I P
Sbjct: 311 YAIYGGLDGVVETISP 326


>gi|13235469|emb|CAC33704.1| Alkaline protease secretion protein [Rickettsia rickettsii]
 gi|13235478|emb|CAC33637.1| Alkaline protease secretion protein [Rickettsia montanensis]
          Length = 113

 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ---QDNNLQTQEYYEVILKI 393
           K I  V +G  A +RF  +       F   +  I P I Q   Q    Q   YY   ++I
Sbjct: 2   KNIDSVHEGLVAKIRFSAFKSRTTPTFTGKVVSISPDIVQDERQHPGQQQDNYYVARVEI 61

Query: 394 TDLAFSD----NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               F+      N+EL  G  AEV       TL + ++ P+TD   K F
Sbjct: 62  DMDEFNKVAKVKNLELHPGMQAEVQIVTGTRTLLRYLLDPVTDTAFKAF 110


>gi|331007531|ref|ZP_08330695.1| type I secretion membrane fusion protein, HlyD family protein
           [gamma proteobacterium IMCC1989]
 gi|330418662|gb|EGG93164.1| type I secretion membrane fusion protein, HlyD family protein
           [gamma proteobacterium IMCC1989]
          Length = 438

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 5/124 (4%)

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           P+++IVP+S    I A+VTP  I+ +  G    +RF  +    ++    II ++  I + 
Sbjct: 315 PILEIVPNSDNFIIHAQVTPADIEQIYFGQETRIRFDTF---NQQSTPEIIGRVLFISAD 371

Query: 377 Q--DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
              D+  + ++++ V + +           + +G P   +FT    +L   +I P+++  
Sbjct: 372 SITDDKAKGEKHFLVKVSLEREQLEKIEATINSGLPVSTMFTTTERSLLNYLIKPLSEQL 431

Query: 435 PKIF 438
              F
Sbjct: 432 FSAF 435


>gi|197251864|ref|YP_002147627.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197215567|gb|ACH52964.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
          Length = 396

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 23/196 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHE 236
           R  L +  + LR  L+S  K+LT+ + L +  A S  ++ + +R   KS L L+  ++  
Sbjct: 153 RAQLADTEAELRDALASVNKELTITQRLEKSGAASHVEVLRLQR--QKSDLGLKITDLRS 210

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q  +     E   +AN E  + L  I +  E       D +++LT+           SP+
Sbjct: 211 QYYV--QAREALSKANAEV-DMLSAILKGRE-------DSVTRLTVR----------SPV 250

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   Q  +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y 
Sbjct: 251 RGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYD 310

Query: 357 DIREKKFKAIIEKIDP 372
                    ++E I P
Sbjct: 311 YAIYGGLDGVVETISP 326


>gi|56414657|ref|YP_151732.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161615627|ref|YP_001589592.1| hypothetical protein SPAB_03410 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197363584|ref|YP_002143221.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56128914|gb|AAV78420.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|161364991|gb|ABX68759.1| hypothetical protein SPAB_03410 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197095061|emb|CAR60607.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 387

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 23/196 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHE 236
           R  L +  + LR  L+S  K+LT+ + L +  A S  ++ + +R   KS L L+  ++  
Sbjct: 144 RAQLADTEAELRDALASVNKELTITQRLEKSGAASHVEVLRLQR--QKSDLGLKITDLRS 201

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q  +     E   +AN E  + L  I +  E       D +++LT+           SP+
Sbjct: 202 QYYV--QAREALSKANAEV-DMLSAILKGRE-------DSVTRLTVR----------SPV 241

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   Q  +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y 
Sbjct: 242 RGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYD 301

Query: 357 DIREKKFKAIIEKIDP 372
                    ++E I P
Sbjct: 302 YAIYGGLDGVVETISP 317


>gi|313886964|ref|ZP_07820665.1| putative lipoprotein [Porphyromonas asaccharolytica PR426713P-I]
 gi|332300003|ref|YP_004441924.1| hypothetical protein Poras_0811 [Porphyromonas asaccharolytica DSM
           20707]
 gi|312923571|gb|EFR34379.1| putative lipoprotein [Porphyromonas asaccharolytica PR426713P-I]
 gi|332177066|gb|AEE12756.1| hypothetical protein Poras_0811 [Porphyromonas asaccharolytica DSM
           20707]
          Length = 304

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 14/106 (13%)

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT----ILSPIAGTI--VYNQSFSSSNYAQQSQPLM 319
           + Q  R+ +     L++ E   +Q      I +PI+GT+  VY         A Q  PL 
Sbjct: 153 IGQQNRSTSGSGDALSVQESQVDQMISRSFIKAPISGTVLTVY---LHQGELAGQGMPLF 209

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           ++  + K  Y+RA VT +Q++HV  G   +V    Y+D+ E++ +A
Sbjct: 210 RLA-NLKQMYLRAYVTAEQLEHVTLGQEVSV----YSDMGEEEAQA 250


>gi|84385854|ref|ZP_00988884.1| hypothetical protein V12B01_12545 [Vibrio splendidus 12B01]
 gi|84379170|gb|EAP96023.1| hypothetical protein V12B01_12545 [Vibrio splendidus 12B01]
          Length = 449

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 74/350 (21%), Positives = 149/350 (42%), Gaps = 40/350 (11%)

Query: 21  TLLSIIGIIGLITWSIL--LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           TLL II ++ L+  ++     I+I VS  GE+L E +V +++    GI+++  V  G  +
Sbjct: 41  TLL-IIFLLALVAIAVASQARIDIVVSVRGELLLESDVEKVQHLEGGILEEMLVRKGEVV 99

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G P+     ++    +D     I      I+ +K   + L    D++E  F S  E+ 
Sbjct: 100 YEGQPIARIRSLDRNTQLDTVNTEI----IQIELDKIRYESLR---DMVEPNFASYIEKF 152

Query: 139 LDFLGKYHSTCSKVFNYGISS---VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            + +    +T  + F+   S+   +   +K K + ++S+   R   EN+ SL+R      
Sbjct: 153 PEQVQVNMNTWRQEFSKNRSNEELITHDIKHKNSLIKSMLKRRKSSENQLSLIR------ 206

Query: 196 QKDLTMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHI----NELY 248
            K L +   L+++   S  D   +  QE  + +    L E++  ++  L  +     +L 
Sbjct: 207 -KQLNIKNTLYKEEMASYVDVLNMKVQESNMVREIENLDESVMNERFQLDKLEKQHRDLV 265

Query: 249 DEANLEFANYLKEISRDLEQN---QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +  N E+   + + ++DL+     Q   +D++ +L           + SP+ G +     
Sbjct: 266 ENRNSEYQAQIIQANKDLKLKRILQPQHSDKVDRL----------VVYSPVDGVVDKLHF 315

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
              S      + +  I P +   +  AK+  K +  V+ G    V+   Y
Sbjct: 316 NFRSAVIPPGESIADIAPINNSLHGEAKIPRKDMGFVEIGQAVKVKMDTY 365


>gi|326803934|ref|YP_004321752.1| dihydrolipoyllysine-residue acetyltransferase component of
          pyruvate dehydrogenase complex [Aerococcus urinae
          ACS-120-V-Col10a]
 gi|326651311|gb|AEA01494.1| dihydrolipoyllysine-residue acetyltransferase component of
          pyruvate dehydrogenase complex [Aerococcus urinae
          ACS-120-V-Col10a]
          Length = 541

 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 24/39 (61%)

Query: 49 EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
          EI N+ +V EI SP SG I+K  VE G   + G PL+ F
Sbjct: 38 EIQNDKSVEEIASPVSGKIEKLYVEEGDVAIVGEPLIDF 76


>gi|168464133|ref|ZP_02698050.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194446689|ref|YP_002041955.1| type I secretion membrane fusion protein HlyD family [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|238909534|ref|ZP_04653371.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|194405352|gb|ACF65574.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|195633766|gb|EDX52180.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|320087172|emb|CBY96939.1| Alkaline protease secretion protein aprE [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 396

 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 23/196 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHE 236
           R  L +  + LR  L+S  K+LT+ + L +  A S  ++ + +R   KS L L+  ++  
Sbjct: 153 RAQLADTEAELRDALASVNKELTITQRLEKSGAASHVEVLRLQR--QKSDLGLKITDLRS 210

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q  +     E   +AN E  + L  I +  E       D +++LT+           SP+
Sbjct: 211 QYYV--QAREALSKANAEV-DMLSAILKGRE-------DSVTRLTVR----------SPV 250

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   Q  +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y 
Sbjct: 251 RGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYD 310

Query: 357 DIREKKFKAIIEKIDP 372
                    ++E I P
Sbjct: 311 YAIYGGLDGVVETISP 326


>gi|52628844|gb|AAU27585.1| pyruvate dehydrogenase E2 component [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 550

 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 35/50 (70%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           ++I SP++G + + +++ G ++ QGTP+LT + +  ++  +++K  IKN+
Sbjct: 171 MDIPSPYAGKVIEMKIKLGDKVSQGTPILTLKTLGKSETPEIEKSQIKNI 220


>gi|329765310|ref|ZP_08256890.1| LAO/AO transport system ATPase [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329138216|gb|EGG42472.1| LAO/AO transport system ATPase [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 332

 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 23/129 (17%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYL-NRLDLENKSSLLRAL---LSSHQKDLTMMKNLFE 207
           VFN       +++K  LT +  IYL N+ DL+  + L  A+   + S +K++     +F 
Sbjct: 189 VFNPNTGDSIQTIKAGLTEIGDIYLVNKSDLDGANQLFDAVREYVGSTEKNI-----IFL 243

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--------------EANL 253
           K +V +N    +     K  + ++    ++K+MLR  NEL D              E++ 
Sbjct: 244 KTSVKKNTGISEFAKTLKDMMSIKNKNKKEKDMLRLENELKDLILNNMSEKIELMLESDK 303

Query: 254 EFANYLKEI 262
            F+ YLK+I
Sbjct: 304 TFSKYLKQI 312


>gi|200388079|ref|ZP_03214691.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199605177|gb|EDZ03722.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
          Length = 396

 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 23/196 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHE 236
           R  L +  + LR  L+S  K+LT+ + L +  A S  ++ + +R   KS L L+  ++  
Sbjct: 153 RAQLADTEAELRDALASVNKELTITQRLEKSGAASHVEVLRLQR--QKSDLGLKITDLRS 210

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q  +     E   +AN E  + L  I +  E       D +++LT+           SP+
Sbjct: 211 QYYV--QAREALSKANAEV-DMLSAILKGRE-------DSVTRLTVR----------SPV 250

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   Q  +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y 
Sbjct: 251 RGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYD 310

Query: 357 DIREKKFKAIIEKIDP 372
                    ++E I P
Sbjct: 311 YAIYGGLDGVVETISP 326


>gi|194735786|ref|YP_002115703.1| type I secretion membrane fusion protein, HlyD family protein
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|204929588|ref|ZP_03220662.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|194711288|gb|ACF90509.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|204321307|gb|EDZ06507.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|322614460|gb|EFY11391.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322621475|gb|EFY18328.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624336|gb|EFY21169.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322629365|gb|EFY26143.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322633605|gb|EFY30347.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322638352|gb|EFY35050.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322639790|gb|EFY36473.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322647349|gb|EFY43845.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649255|gb|EFY45692.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322656025|gb|EFY52325.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322661419|gb|EFY57644.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322662619|gb|EFY58827.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322666992|gb|EFY63167.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322671361|gb|EFY67484.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322677632|gb|EFY73695.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322681542|gb|EFY77572.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322683942|gb|EFY79952.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323195511|gb|EFZ80689.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323200434|gb|EFZ85514.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323203062|gb|EFZ88094.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323205303|gb|EFZ90278.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323210547|gb|EFZ95431.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218172|gb|EGA02884.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323221562|gb|EGA05975.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323227677|gb|EGA11832.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323230935|gb|EGA15053.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323234713|gb|EGA18799.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323238752|gb|EGA22802.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323241452|gb|EGA25483.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323246851|gb|EGA30818.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323253250|gb|EGA37080.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323257046|gb|EGA40755.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323260481|gb|EGA44092.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264462|gb|EGA47968.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323269597|gb|EGA53050.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
          Length = 396

 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 23/196 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHE 236
           R  L +  + LR  L+S  K+LT+ + L +  A S  ++ + +R   KS L L+  ++  
Sbjct: 153 RAQLADTEAELRDALASVNKELTITQRLEKSGAASHVEVLRLQR--QKSDLGLKITDLRS 210

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q  +     E   +AN E  + L  I +  E       D +++LT+           SP+
Sbjct: 211 QYYV--QAREALSKANAEV-DMLSAILKGRE-------DSVTRLTVR----------SPV 250

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   Q  +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y 
Sbjct: 251 RGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYD 310

Query: 357 DIREKKFKAIIEKIDP 372
                    ++E I P
Sbjct: 311 YAIYGGLDGVVETISP 326


>gi|87120538|ref|ZP_01076432.1| hypothetical protein MED121_22312 [Marinomonas sp. MED121]
 gi|86164181|gb|EAQ65452.1| hypothetical protein MED121_22312 [Marinomonas sp. MED121]
          Length = 461

 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 70/342 (20%), Positives = 138/342 (40%), Gaps = 66/342 (19%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +I WS +  ++I  ++ G ++   +   I+S   G IK   V++G  +  G  L++   +
Sbjct: 62  VIIWSFIGRLDIHATTQGRLIISSHSKIIQSLEPGEIKAINVQDGQLVTAGETLISLNPV 121

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                      S++ L       K  LDF        ++  +SR + LL        T +
Sbjct: 122 GAA-------ASVQEL-------KQQLDF--------QRLRQSRLQALL--------TDN 151

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIY--------LNRLDLENKSSLLRALLSSHQKD---- 198
            + N+ +++      + LTR   I         L  L+ +  +++ R   S+ Q +    
Sbjct: 152 PLDNFKMTTAIAGSSIALTRQHLISEWQEVQANLANLNAQMDTNIARVSASNRQIESLQK 211

Query: 199 --LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--- 253
             + + + L  + A+S+ +        Y   LEL E + E     R INE   E  +   
Sbjct: 212 LAININERLDARQALSEQN--------YYPKLELLEQVRESLESERAINEKRSELEVLKK 263

Query: 254 EFANYLKEISRDLEQNQRTFADEMS-----------KLTILEKTREQKTILSPIAGTIVY 302
           ++A    +    L + QR ++ E++           +L I ++ +    +L+P+ G +  
Sbjct: 264 QYAELEGQKRSYLAEKQREYSSELNDVLAEIGGLTQQLVIAKEKQRLMKLLAPVDGVVQQ 323

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
               + +   Q +Q LM IVP +       KV  K +  V++
Sbjct: 324 LAVHTLAGVVQSAQQLMVIVPANMPLEAEVKVLNKDVGFVRE 365


>gi|313892421|ref|ZP_07826011.1| helicase C-terminal domain protein [Dialister microaerophilus UPII
           345-E]
 gi|313119103|gb|EFR42305.1| helicase C-terminal domain protein [Dialister microaerophilus UPII
           345-E]
          Length = 526

 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 33/186 (17%)

Query: 110 IDTEKSALDFLN-NKYDVLEKAFES--REEQLLDFL-GKYHSTCSKVF---NYGISSVYR 162
           + T K   + LN N +  +E    S  R+E+L DF  GKY+  C+ +     +   SV  
Sbjct: 241 VATSKKFTEILNKNGFKAVEVNGNSPDRKEKLKDFENGKYNVICNAMLLTEGWDCPSVDC 300

Query: 163 SLKMKLTRMRSIYLNRLD-----LENKSSLL--RALLSSHQKDLTMMKNLFEKNAVSQND 215
            + ++ T++R++Y   +       ++KS LL    L  + + DL    +L  +N      
Sbjct: 301 IVMLRATKIRALYCQCIGRGTRPFKDKSDLLILDFLWHTQKFDLCRPASLICRN------ 354

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA----NLEFANYLKEISRDLEQNQR 271
               E++  K T +L +  H      ++I ELY+EA    N E  N L E  + L   +R
Sbjct: 355 ----EKVFKKMTDKLADEPHS-----KNIEELYEEAIKDVNEERENALAEELKRLRNRKR 405

Query: 272 TFADEM 277
            F D +
Sbjct: 406 KFVDPL 411


>gi|258510469|ref|YP_003183903.1| catalytic domain of components of various dehydrogenase complexes
          [Alicyclobacillus acidocaldarius subsp. acidocaldarius
          DSM 446]
 gi|257477195|gb|ACV57514.1| catalytic domain of components of various dehydrogenase complexes
          [Alicyclobacillus acidocaldarius subsp. acidocaldarius
          DSM 446]
          Length = 436

 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 49 EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
          E+ N+ ++VE+ SP SG +K+ +V  G+  + G  LLTFE
Sbjct: 39 EVENDKSLVELPSPVSGKVKEIKVPEGTTCVVGDVLLTFE 78


>gi|218289428|ref|ZP_03493662.1| Dihydrolipoyllysine-residue succinyltransferase [Alicyclobacillus
          acidocaldarius LAA1]
 gi|218240534|gb|EED07715.1| Dihydrolipoyllysine-residue succinyltransferase [Alicyclobacillus
          acidocaldarius LAA1]
          Length = 436

 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 17/40 (42%), Positives = 27/40 (67%)

Query: 49 EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
          E+ N+ ++VE+ SP SG +K+ +V  G+  + G  LLTFE
Sbjct: 39 EVENDKSLVELPSPVSGKVKEIKVPEGTTCVVGDVLLTFE 78


>gi|46143510|ref|ZP_00135088.2| COG0845: Membrane-fusion protein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208906|ref|YP_001054131.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           L20]
 gi|190150717|ref|YP_001969242.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303252429|ref|ZP_07338594.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|126097698|gb|ABN74526.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|189915848|gb|ACE62100.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302648702|gb|EFL78893.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 478

 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 33/171 (19%)

Query: 202 MKNLFEKNAVSQNDLNQQER---------IVYKSTL-ELRENIHEQKNMLRHINELYDEA 251
           +K LF   + S++D+  QE           VYKS L E+  ++ + K  +  I +L+   
Sbjct: 239 LKKLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKEEIHLITQLFRAD 298

Query: 252 NLEF----ANYLKEISRDLEQN-QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            LE         K++S +LE+N QR  A                 I +P++GT+   ++ 
Sbjct: 299 ILEKLKQNVEAEKQLSLELEKNEQRQIAS---------------VIRAPVSGTVQQLKTH 343

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           +       ++ LM I P   +  + A +  K I  ++ G  A ++   FP+
Sbjct: 344 TVGGVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPY 394


>gi|23013610|ref|ZP_00053485.1| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 436

 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 1/77 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           ++L P+ +SV +  E++  +  V I+SP  G+I+K  V     + +G  L   +    T 
Sbjct: 182 ALLFPVRLSVLAPAEVVAHNPAV-IRSPMDGVIEKVHVRPNQPVAEGDLLFELDRTTLTG 240

Query: 95  LIDLKKVSIKNLRCHID 111
            +++ K ++   +  +D
Sbjct: 241 KLEVAKKALSTAQAELD 257


>gi|261820527|ref|YP_003258633.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium wasabiae WPP163]
 gi|261604540|gb|ACX87026.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium wasabiae WPP163]
          Length = 453

 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 88/449 (19%), Positives = 178/449 (39%), Gaps = 61/449 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  + P S+ R TL +I    +  I W+ L  I+      G+ +    + +I++   G
Sbjct: 30  RAMMEDSPRSI-RFTLWAIGAFFLFFILWAGLANIDEVTRGDGKAIPSSRLQKIQNLEGG 88

Query: 66  IIKKFQVENGSQILQGTPLLTFED------IETTDLIDLKKVS-IKNLRCHIDTEKSALD 118
           II +  +  G  +  G PLL  +D      +  T+   L  +S I+ L   I  +     
Sbjct: 89  IITEVFIREGQIVNAGDPLLRLDDTRFASNVGETEADRLALLSRIERLNAEISGQTL--- 145

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L+ +         + E++L      Y+S   +++N  +S +   L  +   +R      
Sbjct: 146 VLSEEITTQAPKVAAGEKEL------YNSRRQQLYNE-VSGLEEQLIQRRQELRDFSAKE 198

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL-------- 230
           +   N   LL       Q+++ M + L  + A+S+ ++ +  R   ++  +L        
Sbjct: 199 IQFRNSLGLL-------QQEIKMSEPLIAEGAISKVEVLRLRRAEVETRGQLDSIKLSIP 251

Query: 231 --RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                + E +N +      Y    L   +  +     +E   +   D +++  ++   R 
Sbjct: 252 RAESAVKESENKIEETRSRYKSEALSQLSEAQTNLNKIEATGKALEDRVNRTLVVSPVRG 311

Query: 289 --QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             Q+ +++ I G I            Q    L++IVP      + AK+ P+ I  +  G 
Sbjct: 312 IVQQVLVNTIGGVI------------QPGSDLVEIVPLDDKLLVEAKIRPQDIAFLHPGQ 359

Query: 347 TATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITD---LAFSDNN 402
            A ++   Y           +E+I P  ++ ++ N     +Y + L+ TD   L  +D  
Sbjct: 360 GAIIKLTAYDYTIYGGLTGQLEQISPDTVTDKEGN----SFYIIRLR-TDKNYLGSADKP 414

Query: 403 IELRNGFPAEV-LFTAKNTTLAQEIIHPI 430
           + +  G  A V + T K T L+  ++ PI
Sbjct: 415 LLIIPGMVASVDIITGKKTILSY-LLKPI 442


>gi|313884463|ref|ZP_07818224.1| dihydrolipoyllysine-residue acetyltransferase component of
          pyruvate dehydrogenase complex [Eremococcus coleocola
          ACS-139-V-Col8]
 gi|312620247|gb|EFR31675.1| dihydrolipoyllysine-residue acetyltransferase component of
          pyruvate dehydrogenase complex [Eremococcus coleocola
          ACS-139-V-Col8]
          Length = 439

 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)

Query: 49 EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
          EI ++  VVE+ SP SGII+K  V+ G   + G P+    DIET
Sbjct: 37 EIQSDKAVVELPSPVSGIIRKLHVQEGEMGIVGKPIA---DIET 77


>gi|303250763|ref|ZP_07336958.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650368|gb|EFL80529.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 478

 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 33/171 (19%)

Query: 202 MKNLFEKNAVSQNDLNQQER---------IVYKSTL-ELRENIHEQKNMLRHINELYDEA 251
           +K LF   + S++D+  QE           VYKS L E+  ++ + K  +  I +L+   
Sbjct: 239 LKKLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKEEIHLITQLFRAD 298

Query: 252 NLEF----ANYLKEISRDLEQN-QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            LE         K++S +LE+N QR  A                 I +P++GT+   ++ 
Sbjct: 299 ILEKLKQNVEAEKQLSLELEKNEQRQIAS---------------VIRAPVSGTVQQLKTH 343

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           +       ++ LM I P   +  + A +  K I  ++ G  A ++   FP+
Sbjct: 344 TVGGVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPY 394


>gi|38945|emb|CAA43426.1| ClyI-D protein [Actinobacillus pleuropneumoniae]
 gi|505572|emb|CAA48588.1| secretion protein D [Actinobacillus pleuropneumoniae]
          Length = 478

 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 33/171 (19%)

Query: 202 MKNLFEKNAVSQNDLNQQER---------IVYKSTL-ELRENIHEQKNMLRHINELYDEA 251
           +K LF   + S++D+  QE           VYKS L E+  ++ + K  +  I +L+   
Sbjct: 239 LKKLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKEEIHLITQLFRAD 298

Query: 252 NLEF----ANYLKEISRDLEQN-QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            LE         K++S +LE+N QR  A                 I +P++GT+   ++ 
Sbjct: 299 ILEKLKQNVEAEKQLSLELEKNEQRQIAS---------------VIRAPVSGTVQQLKTH 343

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           +       ++ LM I P   +  + A +  K I  ++ G  A ++   FP+
Sbjct: 344 TVGGVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPY 394


>gi|227497372|ref|ZP_03927604.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
 gi|226833243|gb|EEH65626.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
          Length = 358

 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           G+I+ ED  +E ++   G+I+ F V+ G+ + QG PLLT    E  D
Sbjct: 68  GQIV-EDAALEAQATLEGVIEGFAVDKGATVTQGAPLLTIVKTEAQD 113


>gi|161723253|ref|YP_095532.2| dihydrolipoamide acetyltransferase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 544

 Score = 37.4 bits (85), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 35/50 (70%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           ++I SP++G + + +++ G ++ QGTP+LT + +  ++  +++K  IKN+
Sbjct: 165 MDIPSPYAGKVIEMKIKLGDKVSQGTPILTLKTLGKSETPEIEKSQIKNI 214


>gi|161870585|ref|YP_001599757.1| periplasmic type I secretion system protein [Neisseria meningitidis
           053442]
 gi|161596138|gb|ABX73798.1| periplasmic type I secretion system protein [Neisseria meningitidis
           053442]
          Length = 475

 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 74/359 (20%), Positives = 139/359 (38%), Gaps = 76/359 (21%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET- 92
           WS    I+I  ++SG+ ++      I+   + ++K   V +G  + QG  L   E + T 
Sbjct: 72  WSWFGKIDIVAAASGKTVSGGRSKTIQPLETVVVKAVHVRDGQHVKQGETLAELEAVGTD 131

Query: 93  TDLID----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +D++     L+   +  LR                Y+ +  A ESR    +D        
Sbjct: 132 SDVVQSEQALQAAQLSKLR----------------YEAVLAALESRTVPHIDM------- 168

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++  + G+S         L + +       D +     L++ L  HQ +L   K   E+
Sbjct: 169 -AQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQ-----LQSALRGHQAELQSAKAQ-EQ 221

Query: 209 NAVSQNDLNQQERIVYK-----------STLELRE-------NIHEQKNMLRHI------ 244
             VS   + QQ+   Y+           + LE +        ++   +  +R I      
Sbjct: 222 KLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQAAIAQ 281

Query: 245 ---NELYDEANL--EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ-KTILSPIAG 298
              N + +  NL  +  + L++ +  ++Q    +  +M K     K R+Q  TI SP  G
Sbjct: 282 AEQNRVLNTQNLKRDTLDALRQANEQIDQ----YRGQMDK----AKQRQQLMTIQSPADG 333

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           T+    +++     Q +Q +M + P      +   V  K I  V++G  A V+   FP+
Sbjct: 334 TVQELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY 392


>gi|145538544|ref|XP_001454972.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422760|emb|CAK87575.1| unnamed protein product [Paramecium tetraurelia]
          Length = 417

 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 5/120 (4%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L+   +IE  DLI +KK +   L   + +++S L  L  +YD++++  E    Q + FLG
Sbjct: 57  LIDGTEIEEKDLISIKKGT--TLYAQLKSDESDLSNLKFEYDIIKRVGEG--GQGVIFLG 112

Query: 144 KYHSTCSKVFNYGISS-VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           K+  T   V    ISS  ++   M++    S+ L +LD +N   L       +QK++ M+
Sbjct: 113 KHKETKELVAIKKISSSTWQDQDMEILEQESLILKQLDHKNIVRLYEKFAYPNQKEVIMV 172


>gi|166368197|ref|YP_001660470.1| hemolysin secretion protein [Microcystis aeruginosa NIES-843]
 gi|166090570|dbj|BAG05278.1| hemolysin secretion protein [Microcystis aeruginosa NIES-843]
          Length = 636

 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 2/68 (2%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           TL+S+      + WS    IE  V + G++  +  V E+++P +G+++  +V++G ++ +
Sbjct: 112 TLMSVT--TAALIWSAFAKIEQVVGAQGQLKPQGKVQEVQAPVNGVVQFVKVKDGDRVNK 169

Query: 81  GTPLLTFE 88
           G  L+  +
Sbjct: 170 GDVLVLMD 177


>gi|291544217|emb|CBL17326.1| Multidrug resistance efflux pump [Ruminococcus sp. 18P13]
          Length = 413

 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 86/413 (20%), Positives = 169/413 (40%), Gaps = 63/413 (15%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +I  + W+ L  I++ V+SSG +    N+  ++S   G+++   +E G  +  G  L+  
Sbjct: 51  LIAAVIWACLSKIDVVVTSSGSVQPIGNLNVVQSYAGGVVEAINIEEGEYVQAGDVLIHL 110

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            + ET D +D K+         + ++K  L+     Y  ++   +    ++ D+  +   
Sbjct: 111 -NTETLD-VDEKQ---------LQSQKKILEEQQKIYQKIKAGEDVSAIKVSDYDAELQP 159

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               + +   S  Y++    L + +S      DL  +   L+  L  +Q + T      E
Sbjct: 160 YIQAILDADTS--YKNTLANLEKEKS----NADLNQQIGQLQ--LEEYQANGT------E 205

Query: 208 KNAVSQNDLNQQERI-VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           + A SQ  +NQQ  + V ++ L++ +    +      IN    E + +    L EI  +L
Sbjct: 206 REAESQKLINQQYALAVEQADLQINDT---KTQYSAQINSKISENDTQ----LIEIESNL 258

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ---QSQPLMKIVP 323
           E+ Q + A               + I +P++G   Y  S S +   +    +Q L+ IVP
Sbjct: 259 EKYQLSIA--------------YQDITAPVSG---YVNSISVNTIGETVTSAQELVTIVP 301

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNL 381
                 +   V    I  V++G TA ++   Y   +       ++ I P   +S+Q  ++
Sbjct: 302 DDTSVEMVCYVQNMDIADVEEGMTAEIKLEAYPYNKFGTVSGTVKYISPSSFVSEQLGSV 361

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
                Y V L+I +   S+  I + +G    V       T+ +  + PI   +
Sbjct: 362 -----YLVKLEIEN---SNEEIHVISGLSGTVEIKTDKRTVMEYFLDPIIKGF 406


>gi|34557583|ref|NP_907398.1| putative MCP-type signal transduction protein [Wolinella
           succinogenes DSM 1740]
 gi|34483300|emb|CAE10298.1| PUTATIVE MCP-TYPE SIGNAL TRANSDUCTION PROTEIN [Wolinella
           succinogenes]
          Length = 578

 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 35/221 (15%)

Query: 114 KSAL-DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           KSA+ D LN    VLE+ F  +     DF  KY  + S V N  I+++  S+ + L   R
Sbjct: 336 KSAIADDLNRLASVLER-FSRK-----DFRAKYEESQSVVSN-AINALGASIALMLQETR 388

Query: 173 SIYLNRLDLENKSSLLRALLSS-------HQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               N +DL+ ++SLL   + +           L       E+ + S   ++ +   V K
Sbjct: 389 R---NAMDLDKEASLLEESMQTLSQGTNEQAASLEESAAAIEEMSSSMGGISHRAEEVSK 445

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF---ADEMSKLTI 282
            T E+R       N++  I ++ D+ NL   N   E +R  E   R F   ADE+ KL  
Sbjct: 446 QTEEIR-------NVIMIIRDIADQTNLLALNAAIEAARAGEHG-RGFAVVADEVRKLA- 496

Query: 283 LEKTREQKTILSPIAGTIVYNQSFS--SSNYAQQSQPLMKI 321
               R QK++    A T V  QS +  S +  +Q+Q + +I
Sbjct: 497 ---ERTQKSLGEIEANTNVLVQSVNEMSDSIKEQAQGITQI 534


>gi|149926424|ref|ZP_01914685.1| Type I secretion membrane fusion protein, HlyD [Limnobacter sp.
           MED105]
 gi|149824787|gb|EDM84001.1| Type I secretion membrane fusion protein, HlyD [Limnobacter sp.
           MED105]
          Length = 452

 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 43/267 (16%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV-----------------YK 225
           N ++  R L  S Q +L+ M+ L +  AVS  ++ + ER V                 Y 
Sbjct: 199 NATAAKRNLEISEQ-ELSSMRPLLKSGAVSPVEVLRLERDVAKAKGDYEGAKAQTSRLYS 257

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  E RE I E +  L+ INE    A  E +     ++  LEQNQ    D +++ T+   
Sbjct: 258 AIREAREKIEETR--LKQINE----ARTELSEVKARLA-SLEQNQIELTDRVNQATL--- 307

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
               KT +  +   ++YN   +        + +++IVP  +      ++ PK I  ++  
Sbjct: 308 ----KTPVDGLVQRVLYN---TRGAVVPAGKEVIEIVPIDEQLVFETRINPKDIAFIRPK 360

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ--TQEYYEVILKITDLAFSDNNI 403
             A +R   Y        +  +E I       D+ L    + Y+ V +K+  L  ++  I
Sbjct: 361 QIANIRVTAYDYSIYGGLEGTVESISA-----DSLLDEFGRPYFSVKVKVPRLNVNE-KI 414

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            L  G  A V    ++ T+   +  P+
Sbjct: 415 RLMPGMVANVSIETEDRTVLSYLTKPV 441


>gi|239904860|ref|YP_002951598.1| HlyD family secretion protein [Desulfovibrio magneticus RS-1]
 gi|239794723|dbj|BAH73712.1| HlyD family secretion protein [Desulfovibrio magneticus RS-1]
          Length = 483

 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 84/198 (42%), Gaps = 29/198 (14%)

Query: 193 SSHQKDLTMMKNL-------FEKNAVSQNDL--NQQERIVYKSTL--------ELRENIH 235
           + H+K + + K+L       + + A S+ +    Q  RI  +  L        ELRE++ 
Sbjct: 226 AKHKKQIALAKDLERMYGDIYSQGASSKVEYMKAQSSRIEAEGQLARLQNEAGELRESLA 285

Query: 236 EQKNMLRHINELYDE-ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             +   R   E +   A  E A+  +E+S   E+ ++            E+ R+   + +
Sbjct: 286 RAEAEKRDFVENWKAGAAKELADASRELSGAEERQKKA-----------ERLRDLVVLRA 334

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P +GT++   + S+   AQ  + L+ IVP  +   + A+   + I  ++ G    V+F  
Sbjct: 335 PESGTVLDVAARSAGAVAQAGETLLTIVPAGEELVVEAEAAAQDIGLLRPGDPVRVKFEA 394

Query: 355 YADIREKKFKAIIEKIDP 372
           +   R    +A +  I P
Sbjct: 395 FPYQRHGVAEARLATISP 412


>gi|307253041|ref|ZP_07534926.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306859499|gb|EFM91527.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 473

 Score = 37.4 bits (85), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 33/171 (19%)

Query: 202 MKNLFEKNAVSQNDLNQQER---------IVYKSTL-ELRENIHEQKNMLRHINELYDEA 251
           +K LF   + S++D+  QE           VYKS L E+  ++ + K  +  I +L+   
Sbjct: 234 LKKLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKEEIHLITQLFRAD 293

Query: 252 NLEF----ANYLKEISRDLEQN-QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            LE         K++S +LE+N QR  A                 I +P++GT+   ++ 
Sbjct: 294 ILEKLKQNVEAEKQLSLELEKNEQRQIAS---------------VIRAPVSGTVQQLKTH 338

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           +       ++ LM I P   +  + A +  K I  ++ G  A ++   FP+
Sbjct: 339 TVGGVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPY 389


>gi|299142921|ref|ZP_07036048.1| HlyD family secretion protein [Prevotella oris C735]
 gi|298575650|gb|EFI47529.1| HlyD family secretion protein [Prevotella oris C735]
          Length = 297

 Score = 37.4 bits (85), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 4/102 (3%)

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
           N +    ++ KL ++++ R+   I SPI G +V  +      +A   +PL K+    KL 
Sbjct: 155 NAQMGTTDVEKLQVVDQLRKCH-ISSPING-VVLEKYAQQGEFAIVGKPLFKVADVDKL- 211

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           ++RA +T +Q+Q V+ G   TV +  Y     K +  I+  I
Sbjct: 212 FLRAYITSQQLQKVRFGQRVTV-YADYGGKLRKSYPGIVAWI 252


>gi|295690446|ref|YP_003594139.1| HlyD family type I secretion membrane fusion protein [Caulobacter
           segnis ATCC 21756]
 gi|295432349|gb|ADG11521.1| type I secretion membrane fusion protein, HlyD family [Caulobacter
           segnis ATCC 21756]
          Length = 463

 Score = 37.4 bits (85), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 14/55 (25%), Positives = 29/55 (52%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           W+ +  ++I  S+ G I   DNV  +++   G+++   V  G  + +G PL+  +
Sbjct: 66  WAAVGQVDIVASAEGAITPTDNVKLVQASGPGVVRHIHVREGDWVRRGAPLIDLD 120


>gi|218458792|ref|ZP_03498883.1| HlyD family secretion protein [Rhizobium etli Kim 5]
          Length = 218

 Score = 37.4 bits (85), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 20/95 (21%), Positives = 43/95 (45%)

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E+ R+L   Q    + + +    E   ++  I++P +G +   Q+ +       + P+M 
Sbjct: 83  EVGRELRDTQAQIGEYVERKIAAEDELKRTDIVAPQSGIVHSLQAHTIGGVLTPADPIML 142

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           IVP +    +  ++ PK I  ++ G  A +R   +
Sbjct: 143 IVPENDSLALEVRLAPKDIDQLQIGQRAVLRMSAF 177


>gi|307246320|ref|ZP_07528399.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307248433|ref|ZP_07530454.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307250713|ref|ZP_07532648.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307255304|ref|ZP_07537117.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307257467|ref|ZP_07539234.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307259739|ref|ZP_07541460.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307261887|ref|ZP_07543549.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307264069|ref|ZP_07545667.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|306852790|gb|EFM85016.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306855075|gb|EFM87257.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306857251|gb|EFM89372.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306861753|gb|EFM93734.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306864047|gb|EFM95963.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306866207|gb|EFM98074.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306868434|gb|EFN00249.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306870615|gb|EFN02361.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 473

 Score = 37.4 bits (85), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 33/171 (19%)

Query: 202 MKNLFEKNAVSQNDLNQQER---------IVYKSTL-ELRENIHEQKNMLRHINELYDEA 251
           +K LF   + S++D+  QE           VYKS L E+  ++ + K  +  I +L+   
Sbjct: 234 LKKLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKEEIHLITQLFRAD 293

Query: 252 NLEF----ANYLKEISRDLEQN-QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            LE         K++S +LE+N QR  A                 I +P++GT+   ++ 
Sbjct: 294 ILEKLKQNVEAEKQLSLELEKNEQRQIAS---------------VIRAPVSGTVQQLKTH 338

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           +       ++ LM I P   +  + A +  K I  ++ G  A ++   FP+
Sbjct: 339 TVGGVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPY 389


>gi|260778456|ref|ZP_05887348.1| urocanate hydratase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604620|gb|EEX30915.1| urocanate hydratase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 565

 Score = 37.4 bits (85), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 19/120 (15%)

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKF------KAIIEKIDPIISQQDNNL------ 381
           +T +Q++ ++   T T+R PH  D+R K +      + ++  +DP +++  ++L      
Sbjct: 1   MTERQVEDMRLDTTRTIRAPHGTDLRAKSWLTEAPLRMLMNNLDPDVAEHPHSLVVYGGI 60

Query: 382 ----QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT---LAQEIIHPITDNW 434
               +  E ++ I+++ +    D  + +++G P  V  T KN     +A   + P   NW
Sbjct: 61  GRAARNWECFDKIVEVLERLEDDQTLLVQSGKPVGVFPTHKNAPRVLIANSNLVPHWANW 120


>gi|258404698|ref|YP_003197440.1| type I secretion membrane fusion protein, HlyD family
           [Desulfohalobium retbaense DSM 5692]
 gi|257796925|gb|ACV67862.1| type I secretion membrane fusion protein, HlyD family
           [Desulfohalobium retbaense DSM 5692]
          Length = 447

 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 79/432 (18%), Positives = 164/432 (37%), Gaps = 78/432 (18%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           I+ I  LI W+    ++      G++++      I++   GII+   V+    + +G  L
Sbjct: 42  ILCICALIAWAHFAILDEVTRGVGKVVSSRRTQVIQNLEGGIIEDILVDENQLVDEGDVL 101

Query: 85  LTFEDIETTDLID-------LKKVSIKNLRCHIDTEKSAL--DFLNNKYDVLE---KAFE 132
           +   ++     +          + +I  L+  +  ++     + L    D++E     +E
Sbjct: 102 VRLSNVTAVSQVQDAYHQSLQHRAAIARLQAEVQGKEPEFSEELLREAPDIVEDQRAIYE 161

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL----DLENKSSLL 188
           +R+                          R L+ ++  +RS Y  +L    +++++   +
Sbjct: 162 ARK--------------------------RQLEQEVRVLRSQYTQKLQEVAEMKSRKKQM 195

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A L+   +   + + L +K    + +  Q ER      + LR N+   +  +   N   
Sbjct: 196 EANLAVALEQRDIAEPLVKKQIYPRVEFLQLER----EIISLRGNLETLELSIPRAN--- 248

Query: 249 DEANLEFANYLKEISRDLEQ--------------NQRTFADEMSKLTILEKTREQKT-IL 293
                   N   E+   LEQ               QR   + + +L    + R Q+T + 
Sbjct: 249 --------NAAIEVRERLEQRRAEFEAAALEEMNRQRVQFNSLQELLTAGEDRVQRTDVR 300

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ GTI      +     Q  +P+M+IVP      + A + P  I  +  G  A ++  
Sbjct: 301 SPVRGTIKQLLVNTIGGVIQPGEPIMEIVPVDDTLLVEASIRPADIAFIHPGQKAMIKVS 360

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL--KITDLAFSDNNIELRNGFPA 411
            Y        + ++E+I    +   +N + + +Y+V L  +   L +  N + +  G  A
Sbjct: 361 AYDFSIYGGLEGVVEQIS---ADTLSNEEGESFYKVKLRTRTNALTYRGNTLPIIPGMTA 417

Query: 412 EV-LFTAKNTTL 422
            V + T K + L
Sbjct: 418 TVDVLTGKKSVL 429


>gi|311112293|ref|YP_003983515.1| dihydrolipoyllysine-residue acetyltransferase [Rothia
          dentocariosa ATCC 17931]
 gi|310943787|gb|ADP40081.1| dihydrolipoyllysine-residue acetyltransferase [Rothia
          dentocariosa ATCC 17931]
          Length = 496

 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 31 LITWSILLPIEISVSSS-GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
          ++TW + +  E+S++    EI    +VVE+ SP++G + K  V  G  I  GTP++  
Sbjct: 19 ILTWKVSVGSEVSINDVLVEIETAKSVVELPSPYTGTVDKILVSEGETIEVGTPIIAI 76


>gi|170024436|ref|YP_001720941.1| Sel1 domain-containing protein [Yersinia pseudotuberculosis YPIII]
 gi|169750970|gb|ACA68488.1| Sel1 domain protein repeat-containing protein [Yersinia
           pseudotuberculosis YPIII]
          Length = 720

 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGI K+F    G ++L  TP +  E   T +  +   VSI  + C+I+ +  ++D L N 
Sbjct: 501 SGIKKEFNDRTG-RLLTTTPYVNNEIQGTGETYNADGVSI--IHCYINNK--SIDSLYNP 555

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTC 149
            ++ +KA +S +    + LGKYH TC
Sbjct: 556 IEIRKKASQSDDNAQYE-LGKYHYTC 580


>gi|51596307|ref|YP_070498.1| hypothetical protein YPTB1981 [Yersinia pseudotuberculosis IP
           32953]
 gi|186895347|ref|YP_001872459.1| Sel1 domain-containing protein [Yersinia pseudotuberculosis PB1/+]
 gi|51589589|emb|CAH21219.1| putative exported protein [Yersinia pseudotuberculosis IP 32953]
 gi|186698373|gb|ACC89002.1| Sel1 domain protein repeat-containing protein [Yersinia
           pseudotuberculosis PB1/+]
          Length = 720

 Score = 37.4 bits (85), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGI K+F    G ++L  TP +  E   T +  +   VSI  + C+I+ +  ++D L N 
Sbjct: 501 SGIKKEFNDRTG-RLLTTTPYVNNEIQGTGETYNADGVSI--IHCYINNK--SIDSLYNP 555

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTC 149
            ++ +KA +S +    + LGKYH TC
Sbjct: 556 IEIRKKASQSDDNAQYE-LGKYHYTC 580


>gi|326328618|ref|ZP_08194958.1| pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase)
          [Nocardioidaceae bacterium Broad-1]
 gi|325953579|gb|EGD45579.1| pyruvate dehydrogenase E2 (dihydrolipoamide acetyltransferase)
          [Nocardioidaceae bacterium Broad-1]
          Length = 431

 Score = 37.4 bits (85), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 26/35 (74%)

Query: 55 NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
          +VVE+ SP++G++++  VE G+++  GTP++   D
Sbjct: 45 SVVELPSPYAGVVQELLVEVGTEVQVGTPIIRIGD 79


>gi|260220558|emb|CBA28216.1| hypothetical protein Csp_A06170 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 432

 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 4/109 (3%)

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL----SPIAGTIVYN 303
           + EA  E   YL EI + L Q Q T   E+ +L   +   +Q+  L    SP+ GT+   
Sbjct: 221 HQEALKEQNAYLAEIQKSLAQRQFTAQQEIERLAQEQVKSQQRLELLQLRSPVKGTVQQL 280

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
             F++      +Q LM IVP +        V  K I  +  G    ++ 
Sbjct: 281 AVFTAGGVVTPAQALMVIVPAAHDISAEVMVANKDIGFIHTGQKVRIKL 329


>gi|254469445|ref|ZP_05082850.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
          JE062]
 gi|211961280|gb|EEA96475.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
          JE062]
          Length = 435

 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 18/82 (21%), Positives = 39/82 (47%)

Query: 8  NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
          +L+   P +  R+ L+  + +I  I W+    +E      G ++    +  +++P  GI+
Sbjct: 13 SLQTRPPRAATRVILIVFVALIAGIVWASQAELEEVTRGEGRVVPSSQIQIVQAPEKGIV 72

Query: 68 KKFQVENGSQILQGTPLLTFED 89
          K   VE G  + +G  ++  +D
Sbjct: 73 KSLLVEEGQIVQKGDIVVRVDD 94


>gi|15987933|gb|AAL12798.1| LktD [Mannheimia glucosida]
 gi|15987937|gb|AAL12801.1| LktD [Mannheimia glucosida]
          Length = 472

 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 74/356 (20%), Positives = 152/356 (42%), Gaps = 35/356 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +EI  ++ G++       EIK   + I+++  V++G  + +G  L++   + +       
Sbjct: 80  VEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQFVEKGQLLVSLTALGS------- 132

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
           +  IK     +  EK      N +Y  L  A E+    ++D      +  S+     I  
Sbjct: 133 EADIKKTIASLSLEK----LENYRYQTLLTAIENESLPVIDLSKTEFNDSSEEDRLRIKH 188

Query: 159 ------SVYRSLKMKLTRMRSIYLNRLDLENK--SSLLRALLSS---HQKDLTMMKNLFE 207
                 + ++  KM+    +++   R D E +  S+ +R    +    Q+ L   K L++
Sbjct: 189 LIEEQYTTWQKQKMQ----KTLAYKRKDAEKQTTSAYVRKYEGATRIEQEKLKDFKALYQ 244

Query: 208 KNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEF-ANYLKEIS 263
           + ++S+++L  QE    ++  EL   R  ++E +N L ++ E  +     F ++ L+++ 
Sbjct: 245 QKSLSKHELLSQENKAIEAQNELAVYRSKLNELENDLLNVKEELELITQFFKSDVLEKLK 304

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           + +E N+R    E+ K     + R+   I +P++GT+   +  +       ++ LM IVP
Sbjct: 305 QHIE-NERQLRLELEKNN---QRRQASMIRAPVSGTVQQLKIHTIGGVVTTAETLMIIVP 360

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
              +    A V  K I  V  G    ++   +   R       I+ I P   +Q N
Sbjct: 361 EDDVLEATALVQNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHISPDAIEQPN 416


>gi|21305106|gb|AAM45568.1| AqxD [Actinobacillus equuli subsp. haemolyticus]
          Length = 478

 Score = 37.0 bits (84), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 72/347 (20%), Positives = 147/347 (42%), Gaps = 54/347 (15%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           SI+  +EI  S+SG++       EIK   + ++K+  V++G  + +G  LL         
Sbjct: 75  SIVSHVEIVASASGKLTFSGRSKEIKPIENALVKEIFVQDGQFVQKGELLL--------- 125

Query: 95  LIDLKKVSIKNLRCHIDTEK--SALDFLN---NKYDVLEKAFESREEQLLDFLGKYHSTC 149
                   +  L    D +K  S+L        +Y+ L  A E+    L++      S  
Sbjct: 126 -------HLTALGADADQQKTQSSLSLAKLERYRYETLLTAVETNHLPLIELTHNDFSYA 178

Query: 150 SK----VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL-----RALLSSHQKDLT 200
           S+       + I   + + + K    + + L R + E ++ L        +    Q+ L 
Sbjct: 179 SEEDKTRIRHLIVEQFEAWQ-KQKYQKELVLQRREAEKQTVLANIRKYEGISRVEQEKLK 237

Query: 201 MMKNLFEKNAVSQNDLNQQER---------IVYKSTL-ELRENIHEQKNMLRHINELYDE 250
            +K LF   + S++D+  QE           VY+S L E+  ++ + K   + I +L+  
Sbjct: 238 DLKKLFNSRSASKHDVLAQENHYIEAVNELAVYQSRLNEVESDLRQAKEDAQLITQLFK- 296

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                A+ L+++ +++E  ++    E+ K    E+ +    I +P++GT+   ++ +   
Sbjct: 297 -----ADVLEKLKQNVE-TEKQLKLELEKN---EQRQVASVIRAPVSGTVQQLKTHTVGG 347

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
               ++ LM I P   +  + A +  K I  ++ G  A ++   FP+
Sbjct: 348 VVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPY 394


>gi|56476437|ref|YP_158026.1| hypothetical protein ebA1846 [Aromatoleum aromaticum EbN1]
 gi|56312480|emb|CAI07125.1| similar to periplsmic HlyD type membrane fusion proteins
           [Aromatoleum aromaticum EbN1]
          Length = 447

 Score = 37.0 bits (84), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE  V+++G +L   + V++ +  SG +KK  +E GS++  G  L   + I     +D  
Sbjct: 82  IEDVVTATG-MLQPRDYVDVGAQVSGQLKKIHIEVGSEVKAGELLAEIDPIVLQSRVDAT 140

Query: 100 KVSIKNLRCHI 110
           +  ++NLR  +
Sbjct: 141 RAQLRNLRAQL 151


>gi|15987948|gb|AAL12809.1| lktD [Mannheimia glucosida]
          Length = 472

 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 8/189 (4%)

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEA 251
            Q+ L   K L+++ ++S+++L  QE    ++  EL   R  ++E +N L ++ E  +  
Sbjct: 232 EQEKLKDFKALYQQKSLSKHELLSQENKAIEAQNELAVYRSKLNELENDLLNVKEELELI 291

Query: 252 NLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              F ++ L+++ + +E N+R    E+ K     + R+   I +P++GT+   +  +   
Sbjct: 292 TQFFKSDVLEKLKQHIE-NERQLRLELEKNN---QRRQASMIRAPVSGTVQQLKIHTVGG 347

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
               ++ LM IVP   +    A V  K I  V  G    ++   +   R       I+ I
Sbjct: 348 VVTTAETLMIIVPEDDVLEATALVQNKDIGFVTAGQEVIIKVETFPYTRYGYLTGRIKHI 407

Query: 371 DPIISQQDN 379
            P   +Q N
Sbjct: 408 SPDAIEQPN 416


>gi|118480202|ref|YP_897353.1| periplasmic component of efflux system [Bacillus thuringiensis str.
           Al Hakam]
 gi|118419427|gb|ABK87846.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 352

 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 79/166 (47%), Gaps = 15/166 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L++  P  +    L+  I +IG   W++   ++I    +  I N+++++  KS  +G++ 
Sbjct: 29  LEKKPPKFILLSLLVLFIFLIGFSIWALFGKVDIVSKGNASIQNKEDLIIYKSQINGVVS 88

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V++G  + +G  L+  E+ + ++  +  + ++KN   +    KS L+ L N   + +
Sbjct: 89  SVFVKSGDTVKKGDILIQLENQDLSNKKNELEAALKNFEMN----KSMLEQLKNSIKLNQ 144

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
            +F       +D + K      K +  G    Y+SLK++   + SI
Sbjct: 145 DSF-------MDDIDKKFLEEYKAYEDG----YKSLKLEKEDISSI 179


>gi|223041172|ref|ZP_03611425.1| HlyD-family secretion protein [Campylobacter rectus RM3267]
 gi|222877569|gb|EEF12697.1| HlyD-family secretion protein [Campylobacter rectus RM3267]
          Length = 433

 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 74/346 (21%), Positives = 152/346 (43%), Gaps = 61/346 (17%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
            W IL  +++ VS+ G+++    +  +K   SG++ K  V+   ++ +G  L+   D   
Sbjct: 43  AWLILAKVDVVVSAQGKVIPSGEIKILKPLESGVVSKIFVKESDRVKKGDILIQI-DPTV 101

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNK----YDVLEKAFESREEQLLDFLGKYHST 148
           TD               + +++  L  +N+     Y ++ ++  S++E     + K +S+
Sbjct: 102 TD-------------ASLSSKQDDLAVINSDIALLYALINESNLSKDE-----INKLNSS 143

Query: 149 CSKVFNYG---ISSVYRSLKMKLTRMRSIYLNRLDLE-NKSSLLR-ALLSSHQKD----L 199
              ++N     ++S Y S K KL         +LD++ N+S + R +LL + +K+    L
Sbjct: 144 QLNLYNSQRQILASTYESNKAKLNSA------KLDIKANESEVNRLSLLLNKEKEAKVRL 197

Query: 200 TMMKNLFEKN---AVSQNDLN---QQERIVYK---STLELRENIHEQKNMLRHINELYDE 250
             + +L  K     VS+N +N   Q++  +Y+   S  +L E I E +  ++ I   + E
Sbjct: 198 QKVLDLIAKKEYEEVSKNIINLKEQRDIALYRLKESNKKLEEIIEENEKAIKTIKSSWIE 257

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            +L             E+ +R  + +++ +    KT++ K   SP+ G +      +   
Sbjct: 258 TSL-----------GKEKEKRELSAQINAILFSNKTQQIK---SPVDGFVGKLLIHTEGG 303

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
               +  L+ IVP      I+A V  K I  +K G    ++   ++
Sbjct: 304 VVSPNDNLISIVPSDAPLIIKANVLNKDIGFLKLGQEVAIKIDTFS 349


>gi|104783061|ref|YP_609559.1| type I secretion system membrane fusion protein, HlyD [Pseudomonas
           entomophila L48]
 gi|95112048|emb|CAK16775.1| Putative Type I secretion system membrane fusion protein, HlyD
           [Pseudomonas entomophila L48]
          Length = 418

 Score = 37.0 bits (84), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 129/311 (41%), Gaps = 45/311 (14%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF-EDIETTDLIDLKKVSIKN 105
           +G ++ E  +V++ +P  G+++   V  G Q+  G  LLT   D    D  D  +V+I  
Sbjct: 57  TGVLVPEGGLVKVFAPQVGVVQDLAVSEGQQVQAGAALLTLVSDTHNGD-ADANQVAISR 115

Query: 106 LRCHIDTEKSAL-DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           L   I    S+L D +     + ++  E ++ +L    G+     +++    ++S     
Sbjct: 116 L---IQRRNSSLADEIVETKVLHQQEREGKQRRLAMLQGEQDKVVAQI---ALTS----- 164

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
             +L   + I     +L+ +  + R LL   Q            +AV +  L  +E  + 
Sbjct: 165 -QRLALAQGIAERYTELQRQDFVSRDLLQDKQ------------DAVLEVRLRAEE--LN 209

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           +S L LR +    +  L         A L F N  K+++ DL+   R   +  S L +  
Sbjct: 210 RSLLALRNDSAALRAEL---------AELPF-NQTKQLA-DLD---RRLLESQSSL-LES 254

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           + + Q  I +P AG +      + +  A  S+PL  +VP +   Y    V  +    V+ 
Sbjct: 255 EVKRQVVITAPAAGEVTAIGVVNGAR-ADVSRPLFSLVPQNSQLYAELYVPSRSAGFVRP 313

Query: 345 GYTATVRFPHY 355
           G+   +R+  Y
Sbjct: 314 GHAVMLRYQAY 324


>gi|94495049|ref|ZP_01301630.1| putative type I secretion protein [Sphingomonas sp. SKA58]
 gi|94425315|gb|EAT10335.1| putative type I secretion protein [Sphingomonas sp. SKA58]
          Length = 395

 Score = 37.0 bits (84), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 4/148 (2%)

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           T E+ TI SP+ G +   +  +       +  +M+IVP      I A+++P+ I  +   
Sbjct: 239 TLERLTIRSPVRGVVKSIEVSTIGGVIAPNGEIMQIVPLDDQLLIEARISPRDIAFIHPN 298

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNN 402
             ATV+   Y          ++  I P   + + N     YY V ++   +A    +   
Sbjct: 299 QRATVKITAYDYSIYGGLNGVVSSISPDTIRDEVNPDIY-YYRVFVRTNSVALVNKAGKR 357

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             +  G  A V     + T+ Q ++ P+
Sbjct: 358 FPIVPGMIATVDIHTGSKTVMQYLMKPL 385


>gi|251788038|ref|YP_003002759.1| peptidase M50 [Dickeya zeae Ech1591]
 gi|247536659|gb|ACT05280.1| peptidase M50 [Dickeya zeae Ech1591]
          Length = 707

 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 5   MWKNLKRN-HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           +W ++++N HP SL R  L     I+  +  S+L P   S+     +L  +NV  + +P 
Sbjct: 406 IWWSMRKNAHPVSLLRSGL-----IVAAVLVSLLFPWRGSIRIPA-VLEAENVSALYAPI 459

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
              +K   V +G Q+  G  LL   ++ ++DL
Sbjct: 460 PAQVKALYVADGQQVQAGEKLL---ELTSSDL 488


>gi|297583900|ref|YP_003699680.1| hypothetical protein Bsel_1604 [Bacillus selenitireducens MLS10]
 gi|297142357|gb|ADH99114.1| catalytic domain of components of various dehydrogenase complexes
           [Bacillus selenitireducens MLS10]
          Length = 542

 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           E+ N+  VVEI SP  G +KK  VE G  I  G  ++TF+
Sbjct: 148 EVQNDKAVVEIPSPVDGTVKKIHVEEGVVINVGDVIITFD 187


>gi|226328858|ref|ZP_03804376.1| hypothetical protein PROPEN_02759 [Proteus penneri ATCC 35198]
 gi|225202044|gb|EEG84398.1| hypothetical protein PROPEN_02759 [Proteus penneri ATCC 35198]
          Length = 142

 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 18/72 (25%), Positives = 37/72 (51%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           ++G+   I W+   P++  VS+ G +    N   +++   GII    V+NG  +++G  L
Sbjct: 30  LLGLAIFIFWAAFAPLDKGVSTKGNVSISGNKKSVQASVEGIITDILVKNGDSVIEGQTL 89

Query: 85  LTFEDIETTDLI 96
           +    I++  L+
Sbjct: 90  IQLSPIQSKALV 101


>gi|325962776|ref|YP_004240682.1| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide
          acyltransferase component [Arthrobacter
          phenanthrenivorans Sphe3]
 gi|323468863|gb|ADX72548.1| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide
          acyltransferase component [Arthrobacter
          phenanthrenivorans Sphe3]
          Length = 466

 Score = 37.0 bits (84), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 31 LITWSILLPIEISVSSS-GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
          +++W + +   +S++    E+     VVE+ SPF+G+IK+   + G+ +  G P+++FE
Sbjct: 19 ILSWKVGVGDTVSLNQVIAEVETAKAVVELPSPFAGVIKELHEQPGTIVEVGKPIVSFE 77


>gi|240949938|ref|ZP_04754257.1| hypothetical protein AM305_02152 [Actinobacillus minor NM305]
 gi|240295608|gb|EER46326.1| hypothetical protein AM305_02152 [Actinobacillus minor NM305]
          Length = 417

 Score = 37.0 bits (84), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 96/403 (23%), Positives = 176/403 (43%), Gaps = 71/403 (17%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           GEI+ +   + I S  SG + +  V    Q+ +G PL   +    T   ++   SI+ LR
Sbjct: 55  GEIVMQSYPIIISSSKSGYVSERYVSLHQQVKKGDPLFKIKLDRITSSGEISSNSIQALR 114

Query: 108 CHID-TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             I  T+++ L   NNK     K  +S ++Q+ +                          
Sbjct: 115 EQIKATDRAILLLKNNK----GKTIQSLDKQIKN------------------------NQ 146

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY-- 224
           K+ + + +YL+  +LE+ +     L++ ++K L        K   S ND    +R  Y  
Sbjct: 147 KIKQDKILYLS--ELEDSTQDYAELVNRYEKLL--------KIGYSNNDEVNVQRARYFQ 196

Query: 225 -KSTL-ELRENIHE-QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            KS + E++++I + Q N+L   NE+ +    +F N +  I  ++++     +D   +L 
Sbjct: 197 QKSLVNEIKQDILQIQSNILNLENEI-ETRKTDFDNQI--IRYNIQK-----SDLNIRLM 248

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSS--NYAQQSQPLMKIVPHSKLTYIRAKVTPKQ- 338
            LE   +  TI+SP+ G I   +S S++     ++  PL +I+P  K  Y      P   
Sbjct: 249 ELESVSDL-TIISPVDGFI---ESISATLGQIVKEGDPLSQIIPADKGNYQLVLWVPNSA 304

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI-ISQQD----NNL-----QTQEYYE 388
           I  +KK     +R+  +   +  +F+ +I+ I  +  S Q+    NNL     Q    Y+
Sbjct: 305 ISFLKKNDKVNIRYEAFPFEKFGQFEGVIQSISTLPASLQELAFYNNLPQSAEQNIPLYK 364

Query: 389 VILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           VI+ I D  + ++D  +   +G  AE     +   L + I+ P
Sbjct: 365 VIVDIQDQYVQYNDTILYFMSGMKAEATLFLEKRKLYEWILFP 407


>gi|194099235|ref|YP_002002326.1| MacA [Neisseria gonorrhoeae NCCP11945]
 gi|240113432|ref|ZP_04727922.1| MacA [Neisseria gonorrhoeae MS11]
 gi|254494233|ref|ZP_05107404.1| periplasmic protein [Neisseria gonorrhoeae 1291]
 gi|268599506|ref|ZP_06133673.1| periplasmic protein [Neisseria gonorrhoeae MS11]
 gi|193934525|gb|ACF30349.1| MacA [Neisseria gonorrhoeae NCCP11945]
 gi|226513273|gb|EEH62618.1| periplasmic protein [Neisseria gonorrhoeae 1291]
 gi|268583637|gb|EEZ48313.1| periplasmic protein [Neisseria gonorrhoeae MS11]
 gi|317164765|gb|ADV08306.1| MacA [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 392

 Score = 37.0 bits (84), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI +  N+V + +  SG IKK  V+ G Q+ +G  +        T+ +D++
Sbjct: 43  ISRTVSATGEI-SPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLDME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKY 124
           K  ++  +  + + + AL     KY
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKY 126


>gi|134076470|emb|CAK45110.1| unnamed protein product [Aspergillus niger]
          Length = 827

 Score = 37.0 bits (84), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 29/195 (14%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGK--------------YHSTCSKVFNYGISS 159
           K+ L  L  + +VL K+    +E+L   +G+              Y     K+ +   S 
Sbjct: 432 KATLGALVKRVEVLVKSLGDEQERLQGSVGRENAIRGQFDTLLARYEGASKKIQDLEESI 491

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLR---ALLSSHQ--KDLTMMKNLFEKNAVSQN 214
              +  M  TRMR   L R   E   S+ R   AL   H+  K L  +    E +    N
Sbjct: 492 ASSAGDMLHTRMRMQELEREGKEQAVSIQRLNAALDKYHEEVKGLEALVTELEDDKAKNN 551

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           + ++QE        EL++ + EQ   LR          +E    ++E+  DL+QN+    
Sbjct: 552 ESHKQE------VDELQQKLEEQARSLRTTESTV----VERETRIRELEEDLQQNRTRVC 601

Query: 275 DEMSKLTILEKTREQ 289
           D  +K+  LE  R+Q
Sbjct: 602 DLATKIESLEAERQQ 616


>gi|4973025|gb|AAD34891.1|AF141932_2 rhizobiocin secretion protein RspE [Rhizobium leguminosarum bv.
           trifolii]
          Length = 436

 Score = 37.0 bits (84), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 75/413 (18%), Positives = 163/413 (39%), Gaps = 39/413 (9%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +V +SG ++ +  V  ++    G + +  V+NG  +  G  L+  +D +T   + + +  
Sbjct: 43  AVIASGTVVVDSYVKPVQHQKGGTVGQIFVKNGDLVEAGQVLIHLDDTQTRANLAIVRKR 102

Query: 103 IKNLRCH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  L      ++ E+   D +    D L KA + +  + ++   +  +          S 
Sbjct: 103 LDELSARTARLEAERDGADTVEFSKDFLAKANDPQVSRSIEGEKRLFADRRS------SR 156

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           + R  +++  R+  +      L  + +  R  +   +K+L  ++ LF++  V  N +   
Sbjct: 157 MSRKAQLR-ERIEQLKQETEGLVAQETGKRQEIGLIEKELESLQRLFDQGLVPANRVYAL 215

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINE-------LYDEANLEFANYLKEISRDL-EQNQR 271
           +R     T EL   +  +      I E       + D+   E ++ L++   D+ E ++R
Sbjct: 216 QREAANLTGELGSLLANEAQAKGRITETELQIIQIDDDLRSEVSDQLRQAESDIGEFSER 275

Query: 272 TFA--DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA-QQSQPLMKIVPHSKLT 328
             A  D++ ++ +               G +V+  +  +        + +M+IVP     
Sbjct: 276 LVAAEDDLKRIDVRASQ-----------GGVVHQLAVHAPGAVIAPGEAIMQIVPDRDAL 324

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYY 387
               K++P  I  V  G T  +RF  ++     +   ++  I   + + Q + L    YY
Sbjct: 325 LAEVKLSPTDIDQVTIGQTVHLRFSAFSQRSTPELNGVVAGIAADLTADQRSGL---SYY 381

Query: 388 EVILKITDLAFSD-NNIELRNGFPAEVLF-TAKNTTLAQEIIHPITDNWPKIF 438
            V  +++D  +     +    G P E    T + T LA  +  P  D   + F
Sbjct: 382 VVRAEVSDGEWQRLGQVTPVPGMPVEAFIQTGERTALAY-LTKPFMDQVARAF 433


>gi|317030138|ref|XP_001391976.2| hypothetical protein ANI_1_2100064 [Aspergillus niger CBS 513.88]
          Length = 787

 Score = 37.0 bits (84), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 79/195 (40%), Gaps = 29/195 (14%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGK--------------YHSTCSKVFNYGISS 159
           K+ L  L  + +VL K+    +E+L   +G+              Y     K+ +   S 
Sbjct: 432 KATLGALVKRVEVLVKSLGDEQERLQGSVGRENAIRGQFDTLLARYEGASKKIQDLEESI 491

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLR---ALLSSHQ--KDLTMMKNLFEKNAVSQN 214
              +  M  TRMR   L R   E   S+ R   AL   H+  K L  +    E +    N
Sbjct: 492 ASSAGDMLHTRMRMQELEREGKEQAVSIQRLNAALDKYHEEVKGLEALVTELEDDKAKNN 551

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           + ++QE        EL++ + EQ   LR          +E    ++E+  DL+QN+    
Sbjct: 552 ESHKQE------VDELQQKLEEQARSLRTTESTV----VERETRIRELEEDLQQNRTRVC 601

Query: 275 DEMSKLTILEKTREQ 289
           D  +K+  LE  R+Q
Sbjct: 602 DLATKIESLEAERQQ 616


>gi|238762644|ref|ZP_04623614.1| Hemolysin transport protein [Yersinia kristensenii ATCC 33638]
 gi|238699289|gb|EEP92036.1| Hemolysin transport protein [Yersinia kristensenii ATCC 33638]
          Length = 457

 Score = 37.0 bits (84), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 70/336 (20%), Positives = 139/336 (41%), Gaps = 37/336 (11%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WSI   ++I  S++G+++  ++   I+S   G++    V +G ++  G  L+    I   
Sbjct: 61  WSIFGKLDIHASANGKVIVSEHSKVIQSFEPGVVVAINVRDGDRVAAGQVLIELNPIG-- 118

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             ID +  +I     H   E + +  L               +    FL   +S  S V 
Sbjct: 119 --IDAEVSNINQQLMHRSLEAARMSALLT------------HDPHTHFLSPPNSPESLVM 164

Query: 154 NYG--ISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLL---RALLSSHQKDLTMMKNLFE 207
                ++  Y ++  +L R  S   +N+  ++   + +   +AL+ +  + L  ++ L +
Sbjct: 165 TAKALLAKEYDAVNAELARQDSEQAVNQAYIQTGGTNIAHQKALMKNIYQRLQALRTLVK 224

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             ++++ ++  QER    +  E      EQ  +    + L         +YL E  R   
Sbjct: 225 SKSIAEVEVLIQEREWLNANAEAGRLQSEQVVLQAKKHHLMQTR----LHYLAEKKRSY- 279

Query: 268 QNQRTFADEM------SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           Q Q   A E+       ++ ++EK R+Q T+ +P+AG I  +   +       +QPLM +
Sbjct: 280 QEQLNKAHEVLNQLQQERVKLMEKQRQQ-TLRAPVAGVIQQSTVHTLGGVVTSAQPLMVL 338

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
           VP +    +   +  K +  V  G    V+   FP+
Sbjct: 339 VPENYQLELDVMILNKDVGFVLPGQAVEVKIDSFPY 374


>gi|113868644|ref|YP_727133.1| putative drug or toxin secretion protein [Ralstonia eutropha H16]
 gi|113527420|emb|CAJ93765.1| putative drug or toxin secretion protein [Ralstonia eutropha H16]
          Length = 460

 Score = 37.0 bits (84), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 82/427 (19%), Positives = 158/427 (37%), Gaps = 50/427 (11%)

Query: 15  ASLKRMTLLSIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           A   R+ LL+I+    L+     WS +   ++ V++ G +  E  V    +P  G +   
Sbjct: 30  AEPSRLGLLTIVTTFTLVLCGLVWSFVGHADVIVTAQGTLAPESEVRRFYAPVDGELADL 89

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF--LNNKYDVLE 128
            V       +G P+   + +   +     + +   L   +  E S  ++    +K  ++E
Sbjct: 90  YV------AEGQPVSKDDVLARLNARGAIEAAANALEAQLKLEDSEREWKQFPDKKALME 143

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +   + ++Q+ D   + H T       G + +    + +L   RS      +LEN +   
Sbjct: 144 RRAAALKQQI-DVATRQHETR---IAEGTTRLAEQQRAQLQEARS------NLEN-ARRA 192

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE----------RIVYKSTLEL-----RE- 232
           R      Q     +  L     VSQ+ ++ +           R+      EL     RE 
Sbjct: 193 REFARQEQDRYARLLALPGGGGVSQSQVDAKRAAAQDAENNLRVAQSRLTELDARLGREL 252

Query: 233 -----NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                 +      L  +   YD A  E AN   ++   + Q  R  AD  +++      +
Sbjct: 253 TQASSQLESSGQDLAGLRVQYDAALREIANTEDKLRLQV-QTARLVADAAARIRFENIDK 311

Query: 288 EQ-KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           +    IL+P++G I    S    +  Q + PL  I P      ++  +  +    +++G 
Sbjct: 312 DNFLLILAPVSGVITDVTSTQRGDKVQANTPLGGIAPKDARPVVKIVIAERDRAFLREGL 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIE 404
              ++F  +   R    +  +E I P  + +      Q  YE  +++     A +DN   
Sbjct: 372 PVKLKFSAFPYQRYGIIEGTLEFISP--ATKPGGPDKQPVYEGRVRLARDYYAVADNKYP 429

Query: 405 LRNGFPA 411
           LR G  A
Sbjct: 430 LRYGMTA 436


>gi|15987897|gb|AAL12771.1| LktD [Mannheimia haemolytica]
          Length = 472

 Score = 37.0 bits (84), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 8/189 (4%)

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEA 251
            Q+ L   K L+++ ++S+++L  QE  + ++  EL   R  ++E +N L ++ E  +  
Sbjct: 232 EQEKLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNELENDLLNVKEELELI 291

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVYNQSFSSSN 310
              F + + E  +   +N+R    E+ K       R+Q +++ +PI+GT+   +  +   
Sbjct: 292 TQFFKSDVLEKLKQYIENERQLRLELEK----NNQRKQASMIRAPISGTVQQLKIHTVGG 347

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
               ++ LM IVP   +    A V  K I  V  G    ++   +   R       I+ I
Sbjct: 348 VVTTAETLMIIVPEDDVLEATALVQNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHI 407

Query: 371 DPIISQQDN 379
            P   +Q N
Sbjct: 408 SPDAIEQPN 416


>gi|166366327|ref|YP_001658600.1| hypothetical protein MAE_35860 [Microcystis aeruginosa NIES-843]
 gi|166088700|dbj|BAG03408.1| hypothetical protein MAE_35860 [Microcystis aeruginosa NIES-843]
          Length = 484

 Score = 37.0 bits (84), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 69/395 (17%), Positives = 159/395 (40%), Gaps = 54/395 (13%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           F  K L    P    R  L  +I  + +I  W+I   ++ +    G++  +   V+I + 
Sbjct: 14  FQTKELIDTLPLPWTRGLLYFLIIFVSIILPWAIFSKVDETGVGPGKLEPQGETVKIDAI 73

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G ++K  V  G ++  G P+LT +    + LI  +   I+ +   I+ +KS L     
Sbjct: 74  ATGKVEKIYVREGQEVKAGQPILTLD----SSLIGKE---IQQIEEKIEGQKSRLSQQKL 126

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKV---FNYGISSVYRSLKMKLTRMRSIYLNRL 179
               LE +  ++ +Q      +  ++  +     +  I     SL+ +  R+        
Sbjct: 127 VKSQLEISLTTQSQQNRAAAAEKEASIEQARENVDALIKKAKISLEEQQARVNQAKTALA 186

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-------QNDLNQQERIVYKSTLELRE 232
             +    +L++   +  K++   +  +E  A+S       +++  +++++  +   E++E
Sbjct: 187 QSQTDYPILKSRYETALKEVDRYRKAWEDGAISEVQFIEREDNAKERQQLYERGKAEVKE 246

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF-----ADEMSKLTILEKTR 287
           N H+    L  +   Y + + + +  + +    L++ QR +     ++E++ L + E+  
Sbjct: 247 NQHK----LAELKSAYRQTSQQTSADIAQARLQLQERQRGYQSLRHSNELALLRVQEQIN 302

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--------------------------- 320
              T ++ +A  I  ++S   +   Q SQ ++K                           
Sbjct: 303 NLDTEIATLASEIAQSESQRQALQIQLSQRVLKANTDGTIFSLPIKRAGAVVQSGTRVAE 362

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           I P      ++A++   Q Q ++ G    V+F  Y
Sbjct: 363 IAPKGSRFILKAEMPTDQSQFLRAGMPIKVKFDAY 397


>gi|315224357|ref|ZP_07866191.1| HlyD family secretion protein [Capnocytophaga ochracea F0287]
 gi|314945747|gb|EFS97762.1| HlyD family secretion protein [Capnocytophaga ochracea F0287]
          Length = 310

 Score = 37.0 bits (84), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 26/166 (15%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           RA L+  +++L   +NL    A +Q  L+    ++     +LR+ I   +N L+      
Sbjct: 104 RAQLAQQERELMRTQNLVRGGAATQKQLDDLSALID----QLRKQIAVTENQLK------ 153

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ---KTILSPIAGTIVYNQS 305
              +L   N          QN+   + E       E  +EQ     I++PIAGT++ N +
Sbjct: 154 --VSLTNINT---------QNRNVLSQEAPLQKSAEAVQEQINQGEIINPIAGTVLTNYA 202

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
                     +PL KI     LT ++A +T  Q+  +K G   TVR
Sbjct: 203 LKGE-MQTFGKPLYKIANTDVLT-LKAYITGDQLSQIKLGQQVTVR 246


>gi|288817349|ref|YP_003431696.1| multidrug resistance efflux pump [Hydrogenobacter thermophilus
           TK-6]
 gi|288786748|dbj|BAI68495.1| multidrug resistance efflux pump [Hydrogenobacter thermophilus
           TK-6]
 gi|308750956|gb|ADO44439.1| secretion protein HlyD family protein [Hydrogenobacter thermophilus
           TK-6]
          Length = 375

 Score = 37.0 bits (84), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 110/268 (41%), Gaps = 64/268 (23%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           + E+++EQLL  L +     S   NY +S +  S K    R ++       LE + S ++
Sbjct: 94  SLEAQKEQLLTQLTRVSQELS--VNYSMSDI--SAKEVKKREQA-------LEKQLSQVQ 142

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQND----------LNQQERIVYKSTLELR-------E 232
           A L   QKD    KNL E+  + +            L  QE  + KS  ELR       E
Sbjct: 143 AQLELAQKDRERYKNLLERGVIPRRTFEEADTRYKVLKDQEESLLKSLEELRLSYKKSLE 202

Query: 233 NIH-------EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           N+        +QK +   +  L  E  +E     +E++++   N        +KLT    
Sbjct: 203 NVSLSRIAFLKQKELKAQVEAL--EKEIESLKKQEELAQNYLSN--------TKLT---- 248

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKK 344
                   +P  G +V  +  S  +      P+  IV P S   Y+   +   +++ V+K
Sbjct: 249 --------APFDG-VVAKRYVSVGDVVSPGSPVYAIVKPDS--MYVEVLLEESKLRGVQK 297

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDP 372
           G  A VR   Y +   K F+ ++E+I P
Sbjct: 298 GCKAYVRLDAYPN---KVFEGVVEEISP 322


>gi|224476210|ref|YP_002633816.1| branched-chain alpha-keto acid dehydrogenase subunit E2
           [Staphylococcus carnosus subsp. carnosus TM300]
 gi|222420817|emb|CAL27631.1| dihydrolipoamide acetyltransferase component of pyruvate
           dehydrogenase complex E2 [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 446

 Score = 37.0 bits (84), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 6/70 (8%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
           E+ N+ +VVEI SP SG I++  V+ G+  + G  ++        D  D +++S K    
Sbjct: 38  EVQNDKSVVEIPSPVSGTIEEVVVDEGTVAVVGDTIVKI------DAPDAEEMSFKGGHS 91

Query: 109 HIDTEKSALD 118
           H D+++ A +
Sbjct: 92  HDDSKEEAAE 101


>gi|304394381|ref|ZP_07376304.1| HlyD family secretion protein [Ahrensia sp. R2A130]
 gi|303293821|gb|EFL88198.1| HlyD family secretion protein [Ahrensia sp. R2A130]
          Length = 445

 Score = 37.0 bits (84), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 85/464 (18%), Positives = 173/464 (37%), Gaps = 73/464 (15%)

Query: 10  KRNH-----PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           KR H     P  +  +T L ++G  G   W+    I+ +V + G I        ++    
Sbjct: 17  KRPHTGLRWPGIVAVVTSLCLLG--GSAAWAHYTRIQGAVIAVGTIAVSGKPRSVQHLDG 74

Query: 65  GIIKKFQVENGSQILQGTPLLTFED--IET--------------------TDLIDLKKVS 102
           G++++  V +G  + +G  L+  +   +E                      +++DL K++
Sbjct: 75  GVVEEILVVDGDAVKKGALLMRLDPTVLEANLRIYRARYVNADALAARLNAEMLDLPKLA 134

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFE---SREEQLLDFLGKYHSTCSKVFNYGISS 159
              +   +    SA      +  + E   E    R EQL + +        K F   I  
Sbjct: 135 FNEIPSFL-ANTSADGARTGQVAIFEARTEMRAGRREQLREKI--------KQFGNQIDG 185

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---NLFEKNAVSQNDL 216
             + +  K  ++   Y+ R +L++ SSL R  L    + L + +   +LF +    +++L
Sbjct: 186 TRQVIAAKEEQLG--YIER-ELKSVSSLKRQKLVRDSQVLAIQRSRADLFGQLGEHRSEL 242

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            +    V  + LEL +   E++     + EL D         L+E+++ +   QR     
Sbjct: 243 ARIANSVRDTELELIQ--QERQRRQEAVTELRD-----VTASLEELTQQIISTQRQL--- 292

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                      E+  I +P+AG +   Q  +          + +I+P         ++ P
Sbjct: 293 -----------ERIDIRAPVAGLVHEMQIVTIGGVVPPGGTVAQIIPTDGGFTFDTRIDP 341

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITD 395
             +  V  G  A V    +      +    +  I P  ++ Q      + +Y V +++ D
Sbjct: 342 ASVDQVHVGQPARVTLTAFNQRTTPELNGSVRAISPDTVADQATG---ETFYRVRIQVPD 398

Query: 396 LAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
              +  + +EL  G P       +  T+   +  P++D   + F
Sbjct: 399 RELAKISELELLPGMPVSAFLQTQERTVLSYLARPLSDQLDRAF 442


>gi|318042907|ref|ZP_07974863.1| transporter component [Synechococcus sp. CB0101]
          Length = 380

 Score = 37.0 bits (84), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)

Query: 19  RMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R +   ++G  G  + W  L   E  VS+ G++    +V E++ P +G++K+  V+ G++
Sbjct: 32  RASAWGLVGTTGFALAWLALAQTEEIVSAPGKLEPIGSVSEVQIPLNGVVKQVLVKEGNK 91

Query: 78  ILQGTPLLTFE 88
           + +G  LL  +
Sbjct: 92  VEKGQVLLQLD 102


>gi|220912171|ref|YP_002487480.1| catalytic domain of components of various dehydrogenase complexes
          [Arthrobacter chlorophenolicus A6]
 gi|219859049|gb|ACL39391.1| catalytic domain of components of various dehydrogenase complexes
          [Arthrobacter chlorophenolicus A6]
          Length = 483

 Score = 37.0 bits (84), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 16/59 (27%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 31 LITWSILLPIEISVSSS-GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
          +++W + +   +S++    E+     VVE+ SPF+G+I++   + G+ +  G P+++FE
Sbjct: 19 ILSWKVAVGDTVSLNQVIAEVETAKAVVELPSPFAGVIRELHEQPGTVVEVGKPIVSFE 77


>gi|146412426|ref|XP_001482184.1| hypothetical protein PGUG_05204 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1225

 Score = 37.0 bits (84), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 8/81 (9%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L +  S L+A +S++ K +T++K+L +  + S  DL        +ST E+       KN+
Sbjct: 844 LSDNISDLKAQVSANYKGITLLKDLIDTFSYSVIDLYMG---AIQSTSEV-----AVKNL 895

Query: 241 LRHINELYDEANLEFANYLKE 261
           LR++NE ++  NLE  +YL +
Sbjct: 896 LRYVNEKFEGKNLEAIDYLDD 916


>gi|299069587|emb|CBJ40859.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum CMR15]
          Length = 390

 Score = 37.0 bits (84), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 17/145 (11%)

Query: 273 FADEMSKLTILEKTRE------QKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVPHS 325
           +A  M+ L  L K RE      ++T+++  A  IV +   S+          LM+IVP  
Sbjct: 214 YATTMADLGPLLKVREGRADQLRRTVITSPARGIVKDIRVSTIGGVVGAGGVLMEIVPLD 273

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQT 383
               I A+++P+ I  +  G  ATV+   +         A +E+I P  I  Q D  +  
Sbjct: 274 DQLLIEARLSPRDIAFIHPGQEATVKITAFESSIYGSLPAKVERISPDTIEDQVDRRV-- 331

Query: 384 QEYYEVILKITDLAFSDNNIELRNG 408
             YY  +  +T  A+    +E ++G
Sbjct: 332 --YYYRVYALTQHAY----LETKDG 350


>gi|190348620|gb|EDK41106.2| hypothetical protein PGUG_05204 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1225

 Score = 37.0 bits (84), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 8/81 (9%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L +  S L+A +S++ K +T++K+L +  + S  DL        +ST E+       KN+
Sbjct: 844 LSDNISDLKAQVSANYKGITLLKDLIDTFSYSVIDLYMG---AIQSTSEV-----AVKNL 895

Query: 241 LRHINELYDEANLEFANYLKE 261
           LR++NE ++  NLE  +YL +
Sbjct: 896 LRYVNEKFEGKNLEAIDYLDD 916


>gi|182412738|ref|YP_001817804.1| secretion protein HlyD family protein [Opitutus terrae PB90-1]
 gi|177839952|gb|ACB74204.1| secretion protein HlyD family protein [Opitutus terrae PB90-1]
          Length = 335

 Score = 37.0 bits (84), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 10/149 (6%)

Query: 268 QNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           Q  R   ++      L +TR   T +LSP+ G  V + +     +     P++ +   + 
Sbjct: 188 QQARARTEQARAAVALAETRLANTQLLSPLTGQ-VLSHNIEPGEFVAAGTPVVTVADLAH 246

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT-QE 385
           + ++RA V    + HVK G    VR   + D   K ++  +  I          +QT +E
Sbjct: 247 V-WVRAYVNQTDLGHVKLGQKVAVRTDTFPD---KTYEGTVGFISSEAEFTPKTVQTPKE 302

Query: 386 YYEVILKI-TDLAFSDNNIELRNGFPAEV 413
             +++ +I  D+A  + N EL++G PA+V
Sbjct: 303 RVKLVFRIKVDVA--NPNDELKSGMPADV 329


>gi|283457298|ref|YP_003361871.1| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide
          acyltransferase (E2) component [Rothia mucilaginosa
          DY-18]
 gi|283133286|dbj|BAI64051.1| pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide
          acyltransferase (E2) component [Rothia mucilaginosa
          DY-18]
          Length = 491

 Score = 37.0 bits (84), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 31 LITWSILLPIEISVSSS-GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
          +++W + +  E++++    EI    +VVE+ SPF+G ++   V  G  +  GTP+++ 
Sbjct: 19 ILSWKVAVGTEVAINDVLVEIETAKSVVELPSPFAGTVEALLVAEGETVEVGTPIISI 76


>gi|239626791|ref|ZP_04669822.1| predicted protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516937|gb|EEQ56803.1| predicted protein [Clostridiales bacterium 1_7_47FAA]
          Length = 229

 Score = 37.0 bits (84), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 46/113 (40%), Gaps = 10/113 (8%)

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           K IS D+E       D+     +L +      I SPI GT+V N   ++   A  + PL 
Sbjct: 75  KLISWDVENGDLVEQDQ-----VLGRQEVLPYITSPITGTVVKNDGAANQTVAAGT-PLA 128

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            I   S L YI   V    I  +  G    VR   Y     + FK  + +IDP
Sbjct: 129 VIADTSNL-YIGVNVEETDIMKIHLGQLVDVRLDAYP---HRTFKGQVTEIDP 177


>gi|240118506|ref|ZP_04732568.1| putative ABC transporter, periplasmic protein [Neisseria
           gonorrhoeae PID1]
 gi|268604215|ref|ZP_06138382.1| periplasmic protein [Neisseria gonorrhoeae PID1]
 gi|268588346|gb|EEZ53022.1| periplasmic protein [Neisseria gonorrhoeae PID1]
          Length = 392

 Score = 36.6 bits (83), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI +  N+V + +  SG IKK  V+ G Q+ +G  +        T+ +D++
Sbjct: 43  ISRTVSATGEI-SPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLDME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKY 124
           K  ++  +  + + + AL     KY
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKY 126


>gi|15987941|gb|AAL12804.1| LktD [Mannheimia glucosida]
          Length = 472

 Score = 36.6 bits (83), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 8/189 (4%)

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEA 251
            Q+ L   K L+++ ++S+++L  QE    ++  EL   R  ++E +N L ++ E  +  
Sbjct: 232 EQEKLKDFKALYQQKSLSKHELLSQENKAIEAQNELAVYRSKLNELENDLLNVKEELELI 291

Query: 252 NLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              F ++ L+++ + +E N+R    E+ K     + R+   I +P++GT+   +  +   
Sbjct: 292 TQFFKSDVLEKLKQHIE-NERQLRLELEKNN---QRRQASMIRAPVSGTVQQLKIHTIGG 347

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
               ++ LM IVP   +    A V  K I  V  G    ++   +   R       I+ I
Sbjct: 348 VVTTAETLMIIVPEDDVLEATALVQNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHI 407

Query: 371 DPIISQQDN 379
            P   +Q N
Sbjct: 408 SPDAIEQPN 416


>gi|325981307|ref|YP_004293709.1| secretion protein HlyD family protein [Nitrosomonas sp. AL212]
 gi|325530826|gb|ADZ25547.1| secretion protein HlyD family protein [Nitrosomonas sp. AL212]
          Length = 348

 Score = 36.6 bits (83), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 80/407 (19%), Positives = 154/407 (37%), Gaps = 102/407 (25%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S+  ++ L I+ ++G+I W       I++ +SG I    N   +++   G +++  VE  
Sbjct: 37  SIVAISSLPIVYLLGIIIWET-----IAIEASGRI--RVNNFSVRTAVDGYVQQIFVEPM 89

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G PL    +I   D  D         R HI+     LD           A +  +
Sbjct: 90  QTVSEGKPLAELINIPLIDSYD---------RLHIE-----LD-----------ALKKEQ 124

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +LL    +  S+ +++  Y                +    NRL  ++  +L +   ++ 
Sbjct: 125 RKLLAQAKRSVSSSAQLSRYA------------QEHKRFAYNRL--QHYEALFKQGAAT- 169

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q ++T  KN +++           E IV     E +E    Q + +R I+    +  LEF
Sbjct: 170 QAEITATKNQYQRAL---------ENIVALEKAEHQE--QGQSSEMRRISNQMGQMQLEF 218

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                              D++ +L+++          +P    IV         Y  + 
Sbjct: 219 ---------------EKIRDQLQQLSLV----------APAGNGIVTEVFVQPGEYLSRG 253

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF-------KAIIE 368
           Q L++I+   K+ ++ A + PK   +  +G   TV+FP+    + K         K + E
Sbjct: 254 QALLEIIFPEKV-HVDAFIPPKYQNYAVEGQIVTVKFPNGEKTKAKIISVPGVTQKTLTE 312

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +++P+   +   L   E+ E +           N  L NG P  + F
Sbjct: 313 EVNPLEPVRTAILAQLEFIEQV-----------NNRLINGMPVTIYF 348


>gi|205353726|ref|YP_002227527.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205273507|emb|CAR38486.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
          Length = 387

 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 23/196 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHE 236
           R  L +  + LR  L+S  K+L + + L +  A S  ++ + +R   KS L L+  ++  
Sbjct: 144 RAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQR--QKSDLGLKITDLRS 201

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q  +     E   +AN E  + L  I +  E       D +++LTI           SP+
Sbjct: 202 QYYV--QAREALSKANAEV-DMLSAILKGRE-------DSVTRLTIR----------SPV 241

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   Q  +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y 
Sbjct: 242 RGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYD 301

Query: 357 DIREKKFKAIIEKIDP 372
                    ++E I P
Sbjct: 302 YAIYGGLDGVVETISP 317


>gi|75906844|ref|YP_321140.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75700569|gb|ABA20245.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 710

 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 17/133 (12%)

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG--- 345
           Q  + +PIAGT++     +     Q S+ + +I P +    I+A V  + I  VK G   
Sbjct: 556 QSVVRAPIAGTVLQLNLRNPGQVVQASEAIAQIAPLNAPIQIKANVQAQDINKVKPGQQV 615

Query: 346 --YTATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQT----QEYYEVILKITD--L 396
               +   +P Y  +     K  ++ I P  +   +NN QT       YEVI++     +
Sbjct: 616 QMQVSACPYPDYGTL-----KGTVKTIAPDALPVANNNPQTTTAKTAAYEVIVEPQTPYV 670

Query: 397 AFSDNNIELRNGF 409
              D   +L+ G 
Sbjct: 671 GRGDRQCQLKTGM 683


>gi|16033549|gb|AAL13283.1|AF414141_4 LktD [Mannheimia haemolytica]
 gi|15987893|gb|AAL12768.1| LktD [Mannheimia haemolytica]
 gi|15987901|gb|AAL12774.1| LktD [Mannheimia haemolytica]
 gi|15987905|gb|AAL12777.1| LktD [Mannheimia haemolytica]
 gi|15987909|gb|AAL12780.1| LktD [Mannheimia haemolytica]
 gi|15987913|gb|AAL12783.1| LktD [Mannheimia haemolytica]
 gi|15987921|gb|AAL12789.1| LktD [Mannheimia haemolytica]
 gi|15987925|gb|AAL12792.1| LktD [Mannheimia haemolytica]
 gi|15987929|gb|AAL12795.1| LktD [Mannheimia haemolytica]
          Length = 472

 Score = 36.6 bits (83), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 8/189 (4%)

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEA 251
            Q+ L   K L+++ ++S+++L  QE  + ++  EL   R  ++E +N L ++ E  +  
Sbjct: 232 EQEKLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNELENDLLNVKEELELI 291

Query: 252 NLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              F ++ L+++ + +E N+R    E+ K     + R+   I +P++GT+   +  +   
Sbjct: 292 TQFFKSDVLEKLKQHIE-NERQLRLELEKNN---QRRQASMIRAPVSGTVQQLKIHTIGG 347

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
               ++ LM IVP   +    A V  K I  V  G    ++   +   R       I+ I
Sbjct: 348 VVTTAETLMIIVPEDDVLEATALVPNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHI 407

Query: 371 DPIISQQDN 379
            P   +Q N
Sbjct: 408 SPDAIEQPN 416


>gi|255326065|ref|ZP_05367152.1| pyruvate dehydrogenase complex, dihydrolipoyllysine-residue
          acetyltransferase component [Rothia mucilaginosa ATCC
          25296]
 gi|255296776|gb|EET76106.1| pyruvate dehydrogenase complex, dihydrolipoyllysine-residue
          acetyltransferase component [Rothia mucilaginosa ATCC
          25296]
          Length = 491

 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 31 LITWSILLPIEISVSSS-GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
          +++W + +  E++++    EI    +VVE+ SPF+G ++   V  G  +  GTP+++ 
Sbjct: 19 ILSWKVAVGTEVAINDVLVEIETAKSVVELPSPFAGTVEALLVAEGETVEVGTPIISI 76


>gi|239999517|ref|ZP_04719441.1| putative ABC transporter, periplasmic protein [Neisseria
           gonorrhoeae 35/02]
 gi|240017141|ref|ZP_04723681.1| putative ABC transporter, periplasmic protein [Neisseria
           gonorrhoeae FA6140]
 gi|268595328|ref|ZP_06129495.1| macrolide-specific efflux protein MacA [Neisseria gonorrhoeae
           35/02]
 gi|293398571|ref|ZP_06642749.1| HlyD family secretion protein [Neisseria gonorrhoeae F62]
 gi|268548717|gb|EEZ44135.1| macrolide-specific efflux protein MacA [Neisseria gonorrhoeae
           35/02]
 gi|291611042|gb|EFF40139.1| HlyD family secretion protein [Neisseria gonorrhoeae F62]
          Length = 392

 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 1/85 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI +  N+V + +  SG IKK  V+ G Q+ +G  +        T+ +D++
Sbjct: 43  ISRTVSATGEI-SPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLDME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKY 124
           K  ++  +  + + + AL     KY
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKY 126


>gi|149190149|ref|ZP_01868425.1| Membrane-fusion protein [Vibrio shilonii AK1]
 gi|148836038|gb|EDL52999.1| Membrane-fusion protein [Vibrio shilonii AK1]
          Length = 371

 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +K+PF+GI+    +E G  +  G P+ T  D+ET  LI    VS ++++  + ++ S + 
Sbjct: 176 VKAPFTGIVDHLYIELGDFVSVGDPVATLIDLET--LIIEADVSERHIQQLVTSQPSQIR 233

Query: 119 FLNN 122
           F+N 
Sbjct: 234 FING 237


>gi|328953851|ref|YP_004371185.1| hypothetical protein Desac_2175 [Desulfobacca acetoxidans DSM
           11109]
 gi|328454175|gb|AEB10004.1| hypothetical protein Desac_2175 [Desulfobacca acetoxidans DSM
           11109]
          Length = 498

 Score = 36.6 bits (83), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 2/69 (2%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            ENG +I      ++ +  ET   I + K + +NL+  +D EKS   F NN +D+L KAF
Sbjct: 284 TENGEEIWGPEFHISLDKQETESFITVVKRTHENLQ-KLDLEKSGWHFFNNAFDMLVKAF 342

Query: 132 ESRE-EQLL 139
            +   EQLL
Sbjct: 343 FTGGLEQLL 351


>gi|254360697|ref|ZP_04976846.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Mannheimia haemolytica PHL213]
 gi|261491840|ref|ZP_05988419.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261494689|ref|ZP_05991169.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|153091237|gb|EDN73242.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Mannheimia haemolytica PHL213]
 gi|261309654|gb|EEY10877.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261312495|gb|EEY13619.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 478

 Score = 36.6 bits (83), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 8/189 (4%)

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEA 251
            Q+ L   K L+++ ++S+++L  QE  + ++  EL   R  ++E +N L ++ E  +  
Sbjct: 232 EQEKLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNELENDLLNVKEELELI 291

Query: 252 NLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              F ++ L+++ + +E N+R    E+ K     + R+   I +P++GT+   +  +   
Sbjct: 292 TQFFKSDVLEKLKQHIE-NERQLRLELEKNN---QRRQASMIRAPVSGTVQQLKIHTIGG 347

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
               ++ LM IVP   +    A V  K I  V  G    ++   +   R       I+ I
Sbjct: 348 VVTTAETLMIIVPEDDVLEATALVPNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHI 407

Query: 371 DPIISQQDN 379
            P   +Q N
Sbjct: 408 SPDAIEQPN 416


>gi|114330978|ref|YP_747200.1| secretion protein HlyD family protein [Nitrosomonas eutropha C91]
 gi|114307992|gb|ABI59235.1| secretion protein HlyD family protein [Nitrosomonas eutropha C91]
          Length = 319

 Score = 36.6 bits (83), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 20/96 (20%), Positives = 45/96 (46%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P E  ++ +G I  +   + + +  SG++ +  VE G ++  GTPL   +D E    + +
Sbjct: 42  PYESFIAGAGIIEAKSRNISVGTALSGLVTRVAVEVGDKVKVGTPLFYLDDREARAELAI 101

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +   +   R  +   ++ L+   +  D++E   + R
Sbjct: 102 RNSDLARARAGLMEARAMLEDSKSLSDLIESLADQR 137


>gi|323698693|ref|ZP_08110605.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio sp. ND132]
 gi|323458625|gb|EGB14490.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio desulfuricans ND132]
          Length = 442

 Score = 36.6 bits (83), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 72/355 (20%), Positives = 145/355 (40%), Gaps = 47/355 (13%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M+   ++ I+  I W+ L  ++      G ++    + EI++   GI+ +  V+ G  + 
Sbjct: 31  MSTAILLMIVIFIVWAKLAMLDERTRGFGRVIPSQRIQEIQNLEGGIMNELFVQEGQTVE 90

Query: 80  QGTPLLT---------FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +G  L           + D ++  L    + +I  L+   D      DF     DV++KA
Sbjct: 91  KGDILCRLSNEQAASYYRDAQSKAL--EHQAAIARLQAEADGAAEP-DF---PPDVVKKA 144

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSV---YRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +  E+Q   F+ + +       N  I  +   Y+  + +++ M +          + + 
Sbjct: 145 PQLVEDQRRIFVAQRNK-----LNIDIGLLEDQYQQRQQEVSEMVA----------RRNQ 189

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHI 244
           LR  L   +K   + K L EK+  S+ D  + E+ V +   +++     I   +   +  
Sbjct: 190 LRQSLDVAEKQRNIAKPLVEKHIHSELDYLRLEQTVVQLRGDMQALTLGIPRVQRAAKEA 249

Query: 245 NELYDEANLEF-ANYLKEI-SRDLEQN--QRTFADEMSKLTILEKTREQKTILSPIAGTI 300
               D+A  E+ A+ L+EI SR  E N  Q   +    ++T       +  + SP+ G +
Sbjct: 250 KGRIDQARAEYRADALEEINSRRQELNSIQENLSSGGDRVT-------RTDVRSPVRGVV 302

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +    +     +  + +M++VP      + A+V P  I  +  G  A V+   Y
Sbjct: 303 KHIMVNTIGGVIRPGESIMEVVPLDDTLLVEAEVKPSDIAFLHPGQKAKVKITAY 357


>gi|296273044|ref|YP_003655675.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
 gi|296097218|gb|ADG93168.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
          Length = 388

 Score = 36.6 bits (83), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 83/431 (19%), Positives = 167/431 (38%), Gaps = 77/431 (17%)

Query: 22  LLSIIG-----IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +L IIG     II  + W+ L  I+    + G ++      EI+S   GI+K  +V  G 
Sbjct: 14  ILIIIGSFFLLIIPFLVWASLTSIDQISHARGNVITTAKTQEIQSALDGIVKDIKVREGK 73

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++ +   L+  ED                                ++Y   + A+ES   
Sbjct: 74  EVKENDILIELED--------------------------------SQY---KAAYESSYS 98

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM----RSIYLNRLDLEN--KSSLLRA 190
           ++           ++V  YG   V+  +  K   +    + ++  R   +N  KS+L  +
Sbjct: 99  KVAALKATLARLKAEV--YGQDLVFPEMVKKYPELIQTQKELFRRRQKAQNDEKSALTES 156

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
           LL S + +L ++K L +   V  +++           + ++  I +++       E+ ++
Sbjct: 157 LLLSKE-ELRLIKPLLKTGDVGSSEI-----------IRIKRQIADKE------GEIINK 198

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            N  F +   E+++  E+      +   K   LE+T  + T+ + +   I+  +      
Sbjct: 199 QNKYFQDSQAEMTKSEEELYSKEQELEDKKINLERTTIKATMDAIVKNIIITTRGAK--- 255

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +    ++++VP      I  K+ P +I  VK G  A V+   Y       F  ++  I
Sbjct: 256 -VRPGDVILQLVPMQDKLIIETKLEPSEISFVKIGQKAAVKLDAYDYSIYGIFDGVVNYI 314

Query: 371 DPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKN----TTLA 423
            P    +  N   + Y+ V + +     ++     IEL  G  A+V     N    T L 
Sbjct: 315 SPDTLVEKTNEGEKYYFRVQIAVDQKELISKHGKKIELTPGMTAQVDIVTGNRKVITYLT 374

Query: 424 QEIIHPITDNW 434
           + +I  I+ ++
Sbjct: 375 KPLIKTISQSF 385


>gi|300853795|ref|YP_003778779.1| hypothetical protein CLJU_c05950 [Clostridium ljungdahlii DSM
           13528]
 gi|300433910|gb|ADK13677.1| hypothetical protein CLJU_c05950 [Clostridium ljungdahlii DSM
           13528]
          Length = 264

 Score = 36.6 bits (83), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 61/151 (40%), Gaps = 7/151 (4%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           T +L+  + + +N L   N     A     N           N  T+  ++++     K+
Sbjct: 87  TQDLQNQVDQAQNALNAANSNLTSAQSSTYNSTSLTGSSTSSNISTYQSQVNQAQAALKS 146

Query: 287 REQK----TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +      TI SPIAGT V  ++ +  + A   +PL+ IV   KL Y+ A      +  +
Sbjct: 147 AQNSLNNATITSPIAGT-VSAKNVNVGDMAYPGKPLISIVNSDKL-YVNAYAPSYILNKI 204

Query: 343 KKGYTATVRFPHYADIR-EKKFKAIIEKIDP 372
             G    +R P   D   + K   I  K++P
Sbjct: 205 NVGQNVIIRVPDLPDQDFQGKVTVINSKVEP 235


>gi|332705581|ref|ZP_08425657.1| uroporphyrinogen decarboxylase [Lyngbya majuscula 3L]
 gi|332355373|gb|EGJ34837.1| uroporphyrinogen decarboxylase [Lyngbya majuscula 3L]
          Length = 353

 Score = 36.6 bits (83), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 71/182 (39%), Gaps = 31/182 (17%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           ++++L+  +P+  +R     I   I L  W    P        G IL  D    I +P  
Sbjct: 36  VYRDLRDKYPSFRERSENPDIAIEISLQPWKAFQP-------DGVILFSD----ILTPLP 84

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS-----IKNLRCHIDTEKSALDF 119
           GI  +F++      +   P+ T E I+   L+DL +       +K LR  +  E + L F
Sbjct: 85  GIGIEFEIVESKGPIINQPIRTQEQIDQLHLLDLDRFGFIREILKALRQEVGNEAAVLGF 144

Query: 120 LNNKYDVLEKAFE---------------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           +   + +   A E               S+   L  FLGK     +    Y I+S  + +
Sbjct: 145 VGAPWTLGAYAIEGKSSKNYSIIKGMAFSQPAMLHQFLGKLADAIAIYVRYQINSGAQVI 204

Query: 165 KM 166
           +M
Sbjct: 205 QM 206


>gi|15987917|gb|AAL12786.1| LktD [Mannheimia haemolytica]
          Length = 472

 Score = 36.6 bits (83), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 8/189 (4%)

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEA 251
            Q+ L   K L+++ ++S+++L  QE  + ++  EL   R  ++E +N L ++ E  +  
Sbjct: 232 EQEKLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNELENDLLNVKEELELI 291

Query: 252 NLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              F ++ L+++ + +E N+R    E+ K     + R+   I +P++GT+   +  +   
Sbjct: 292 TQFFKSDVLEKLKQHIE-NERQLRLELEKNN---QRRQASMIRAPVSGTVQQLKIHTIGG 347

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
               ++ LM IVP   +    A V  K I  V  G    ++   +   R       I+ I
Sbjct: 348 VVTTAETLMIIVPEDDVLEATALVQNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHI 407

Query: 371 DPIISQQDN 379
            P   +Q N
Sbjct: 408 SPDAIEQPN 416


>gi|206891108|ref|YP_002247972.1| efflux transporter, RND family, MFP subunit [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206743046|gb|ACI22103.1| efflux transporter, RND family, MFP subunit [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 386

 Score = 36.6 bits (83), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 18/131 (13%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           I+SP+ G ++          A   Q+  L  I P      +   V    I  +K G  AT
Sbjct: 184 IVSPVNGVVIAKNVEVGQTVAASFQTPTLFTIAPDLTKMQVDTNVDEADISKIKNGMEAT 243

Query: 350 VRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
                Y+D   +KFK ++ +I   P ++Q   N+ T   Y+V+     +A  + ++ L+ 
Sbjct: 244 FTVDAYSD---RKFKGVVAQIRLSPTVTQ---NVVT---YDVV-----IAVDNTHLLLKP 289

Query: 408 GFPAEVLFTAK 418
           G  A V F A+
Sbjct: 290 GMTANVTFVAQ 300


>gi|325275962|ref|ZP_08141799.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           sp. TJI-51]
 gi|324098902|gb|EGB96911.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           sp. TJI-51]
          Length = 394

 Score = 36.6 bits (83), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 34/190 (17%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYK 225
           TR R +      +E+   L+R+       +L + +NL +  A S+ +   LN+Q     +
Sbjct: 149 TRRRGLEQTLAGIEDSLRLVRS-------ELKITENLAKMGASSRVEVIRLNRQ-----R 196

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           S LEL+ N      ++R   EL  +A+ E A+ L E+ R         +D +++LT+   
Sbjct: 197 SELELKANEARSDYLVRAREELA-KASAE-ADSLSEVIRG-------RSDSLTRLTLR-- 245

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                   SP+ G +   +  +     Q    +MKIVP  +   I  ++ P+ I  +   
Sbjct: 246 --------SPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRDIAFIHPD 297

Query: 346 YTATVRFPHY 355
             A V+   Y
Sbjct: 298 QAAKVKISAY 307


>gi|207858039|ref|YP_002244690.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|206709842|emb|CAR34194.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
          Length = 387

 Score = 36.6 bits (83), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 23/196 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHE 236
           R  L +  + LR  L+S  K+L + + L +  A S  ++ + +R   KS L L+  ++  
Sbjct: 144 RAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQR--QKSDLGLKITDLRS 201

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q  +     E   +AN E  + L  I +  E       D +++LTI           SP+
Sbjct: 202 QYYV--QAREALSKANAEV-DMLSAILKGRE-------DSVTRLTIR----------SPV 241

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   Q  +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y 
Sbjct: 242 RGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYD 301

Query: 357 DIREKKFKAIIEKIDP 372
                    ++E I P
Sbjct: 302 YAIYGGLDGVVETISP 317


>gi|322513531|ref|ZP_08066632.1| HlyD family type I secretion membrane fusion protein
           [Actinobacillus ureae ATCC 25976]
 gi|322120684|gb|EFX92575.1| HlyD family type I secretion membrane fusion protein
           [Actinobacillus ureae ATCC 25976]
          Length = 478

 Score = 36.6 bits (83), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 81/172 (47%), Gaps = 23/172 (13%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQER---------IVYKSTL-ELRENIHEQKNMLRHIN 245
           Q+ L  +K LF   + S++D+  QE           VY+S L E+  ++ + K   + I 
Sbjct: 233 QEKLKDLKKLFNSKSASKHDVLAQENHHIEAVNELAVYQSCLNEVESDLRQAKEDAQLIT 292

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +L+       A+ L+++ +++E  ++    E+ K    E+ +    I +P++GT+   ++
Sbjct: 293 QLFK------ADVLEKLKQNVE-TEKQLKLELEKN---EQRQVASVIRAPVSGTVQQLKT 342

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
            +       ++ LM I P   +  + A +  K I  ++ G  A ++   FP+
Sbjct: 343 HTVGGVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPY 394


>gi|326628832|gb|EGE35175.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 396

 Score = 36.6 bits (83), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 23/196 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHE 236
           R  L +  + LR  L+S  K+L + + L +  A S  ++ + +R   KS L L+  ++  
Sbjct: 153 RAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQR--QKSDLGLKITDLRS 210

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q  +     E   +AN E  + L  I +  E       D +++LTI           SP+
Sbjct: 211 QYYV--QAREALSKANAEV-DMLSAILKGRE-------DSVTRLTIR----------SPV 250

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   Q  +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y 
Sbjct: 251 RGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYD 310

Query: 357 DIREKKFKAIIEKIDP 372
                    ++E I P
Sbjct: 311 YAIYGGLDGVVETISP 326


>gi|294142149|ref|YP_003558127.1| HlyD family secretion protein [Shewanella violacea DSS12]
 gi|293328618|dbj|BAJ03349.1| HlyD family secretion protein [Shewanella violacea DSS12]
          Length = 473

 Score = 36.6 bits (83), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 77/327 (23%), Positives = 138/327 (42%), Gaps = 30/327 (9%)

Query: 14  PASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           PA   R  L SI+ + + LI W+    I+I  ++ G+I+    V  I+   +G++K   V
Sbjct: 39  PAKWSRSLLWSIMALMLVLIAWASWAEIDIIATAQGKIVPSGQVKIIQPLETGVVKTIFV 98

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G  +  G  L+  ++  T+   D  ++S    + +I+       FL     ++  A  
Sbjct: 99  KEGQHVKAGDKLIALDN--TSSQADADRLS-SEWQGYIEDLARQQAFLARLDAIVSSAKV 155

Query: 133 SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           + +   +       +T     N    + SV++  + KL    S  + +L  E KS  ++ 
Sbjct: 156 NTKANAIALSVTTSTTPPLPVNQRLLLESVWQEYQSKLNSFTS-EITKLTAEKKS--IKI 212

Query: 191 LLSSHQKDLTMM-------KNLFEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNM 240
            +   +K L ++        +L   +AVS+N   +L QQ RI  + TL L      Q   
Sbjct: 213 DVGRIEKTLPLVIERERSYYSLLGTSAVSRNQYLELKQQ-RIDQEETLLL------QGAK 265

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQ--NQRTFADEMS--KLTILEKTREQKTILSPI 296
           +  IN   + A      YL E  R+  Q  NQ T   E +  +LT   +  + + + SP+
Sbjct: 266 VEQINASIESAKHNLYAYLSESRRNTLQEINQLTRQSESTNQELTKANRLTQLRVLTSPV 325

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            G +      +       +Q L+ IVP
Sbjct: 326 DGIVEELVIATIGCVVTPAQELLHIVP 352


>gi|198245008|ref|YP_002216700.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|197939524|gb|ACH76857.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|326624455|gb|EGE30800.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 396

 Score = 36.6 bits (83), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 81/196 (41%), Gaps = 23/196 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHE 236
           R  L +  + LR  L+S  K+L + + L +  A S  ++ + +R   KS L L+  ++  
Sbjct: 153 RAQLADTEAELRDALASVNKELAITQRLEKSGAASHVEVLRLQR--QKSDLGLKITDLRS 210

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q  +     E   +AN E  + L  I +  E       D +++LTI           SP+
Sbjct: 211 QYYV--QAREALSKANAEV-DMLSAILKGRE-------DSVTRLTIR----------SPV 250

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   Q  +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y 
Sbjct: 251 RGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYD 310

Query: 357 DIREKKFKAIIEKIDP 372
                    ++E I P
Sbjct: 311 YAIYGGLDGVVETISP 326


>gi|268316996|ref|YP_003290715.1| efflux transporter, RND family, MFP subunit [Rhodothermus marinus
           DSM 4252]
 gi|262334530|gb|ACY48327.1| efflux transporter, RND family, MFP subunit [Rhodothermus marinus
           DSM 4252]
          Length = 374

 Score = 36.6 bits (83), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 10/92 (10%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTF-------EDIETTDLIDLKKVSIKNLRCH 109
           + +KS  +G++++  V+ G  +  GTPLL         E I+    I+L+++ + NLR  
Sbjct: 59  ISVKSQVAGVVRRLFVDAGDYVEAGTPLLEIQPNPTPQELIDAERRIELRQLEVDNLRRE 118

Query: 110 IDTEKSALD---FLNNKYDVLEKAFESREEQL 138
            + ++   D       +Y+   +A+E    QL
Sbjct: 119 FERQQQLFDRRLISEQEYERARRAYEEARLQL 150


>gi|119512898|ref|ZP_01631962.1| hypothetical protein N9414_07104 [Nodularia spumigena CCY9414]
 gi|119462436|gb|EAW43409.1| hypothetical protein N9414_07104 [Nodularia spumigena CCY9414]
          Length = 505

 Score = 36.6 bits (83), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 79/423 (18%), Positives = 164/423 (38%), Gaps = 95/423 (22%)

Query: 2   HHFM-----WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           H F+     W N+     A +  +T ++  G+  +  ++I + +  S+   GE+     +
Sbjct: 29  HEFLPRISKWTNIG----AGVLLITFMAAAGLTSVFNYNITVKVPASIRPEGEL----GI 80

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCH 109
           V+  S   G ++K  V+    + QG P+   +D        +  + I+  ++ ++ +   
Sbjct: 81  VQ--SAVMGTVQKIDVQENQVVKQGEPIAYIDDSRLQNQKSQLENSIEQSQLQLRQIDAQ 138

Query: 110 ID---TEKSALDFLNNKYDVLEKA--------FESREEQLLDFLGKYHSTCSKVFNYGIS 158
           I    T+ +A   L N+  +  +A        +E +++  +  L +  +T    +N    
Sbjct: 139 IAEIATQIAAQTTLLNRTIIAAQAELSASQRNYEDQQKTTMADLTEAEAT----WNLA-- 192

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                   K+ R R    N L    + + L   L+  Q+D   ++++    A+S+N L +
Sbjct: 193 --------KIQRDRLQQNNLLTATVQEAELALNLAKKQRD--RLQSVVASGAISRNLLEE 242

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI----------SRDLEQ 268
           +++ V  +  +L +     K+++    +    A ++       I          S  ++Q
Sbjct: 243 KQQEVKSAQAKLEQAKANAKDLMSEKEQALKIAQIKLEKAQNSINPHNAAITIASERIKQ 302

Query: 269 NQRTFADEMSKLTILEKTRE----------------------------QKTILSPIAGTI 300
            Q   A   S L+ L + RE                            Q  I +PIAGT+
Sbjct: 303 EQ---ASGKSTLSALNRERETLFQQRLELEKQTMRTRKELQQVETDLNQTVIRAPIAGTL 359

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG-----YTATVRFPHY 355
           +     +     Q SQ + +I P +    I+A V P+ I  V+ G       +   +P+Y
Sbjct: 360 LQLNLRNPGQVVQPSQAIAQIAPVNAPIVIKAFVPPQDIDKVEPGQKVQMQVSACPYPNY 419

Query: 356 ADI 358
             +
Sbjct: 420 GTL 422


>gi|71276532|ref|ZP_00652807.1| colicin V secretion protein [Xylella fastidiosa Dixon]
 gi|71900727|ref|ZP_00682849.1| colicin V secretion protein [Xylella fastidiosa Ann-1]
 gi|170729756|ref|YP_001775189.1| colicin V secretion protein [Xylella fastidiosa M12]
 gi|71162709|gb|EAO12436.1| colicin V secretion protein [Xylella fastidiosa Dixon]
 gi|71729497|gb|EAO31606.1| colicin V secretion protein [Xylella fastidiosa Ann-1]
 gi|167964549|gb|ACA11559.1| colicin V secretion protein [Xylella fastidiosa M12]
          Length = 420

 Score = 36.6 bits (83), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 19/205 (9%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  +K L +   V    + QQE  V   T ++ + +  Q  M R        +  +    
Sbjct: 176 LQRLKQLEDARYVGTLQIKQQESTVLDYTSQM-QAMQRQAMMTRR-------SIAQLQQS 227

Query: 259 LKEISRDLEQNQRTFADEMSKL---TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           L+E+    + +Q T+  E+++L    +  + R   +++SPI G IV  Q   S    Q  
Sbjct: 228 LRELPGQYQNSQATYRRELAQLEQEKVETEARGALSVVSPIDG-IVATQIVKSQQTVQAG 286

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PI 373
           QP++ ++P +        +    I  +++G    +R+  Y   +    +  + +I    +
Sbjct: 287 QPMLSLLPVNGELEAELLLPSSAIGFIEQGDEVRLRYQAYPYQKFGHQRGQVSRISRSAL 346

Query: 374 ISQQ-----DNNLQTQEYYEVILKI 393
            S +      N  QT+ YY V++K+
Sbjct: 347 TSSELAALIGNTQQTEPYYRVVVKL 371


>gi|119773647|ref|YP_926387.1| hypothetical protein Sama_0507 [Shewanella amazonensis SB2B]
 gi|119766147|gb|ABL98717.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 349

 Score = 36.6 bits (83), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 9/208 (4%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + NL+R        + L  II  + L+ W +L P  + + + G + +E   +E++SP SG
Sbjct: 24  YDNLRRGAYRGRWYLLLALIIAPVLLVIWFVLKPW-LFILAPGIVTSEP--LEMRSPASG 80

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++       G  +  G PLL  +D      I   +  +  ++   D        +  K  
Sbjct: 81  VVHAVYQTRGDVVSTGQPLLVLKDPALDAQIQGLERQLTQMQQFRDLGAEISAQIGEKIR 140

Query: 126 VLEKAFESREEQLLDFLGKYHS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           V E+    R+++LL    K+ +           +   + S KM L + R+  ++ L  + 
Sbjct: 141 VAEEGM-IRQDELLSQFEKFRAKGVVPTADMAAVLQAHTSAKMALEQARAELVSELQRQQ 199

Query: 184 KSSLLRALLSSHQK---DLTMMKNLFEK 208
           ++     +  S Q+   +L+ +K L E+
Sbjct: 200 EARQAGVVTQSRQRMELELSRLKALREQ 227


>gi|148983506|ref|ZP_01816825.1| hypothetical protein CGSSp3BS71_05229 [Streptococcus pneumoniae
           SP3-BS71]
 gi|147923653|gb|EDK74765.1| hypothetical protein CGSSp3BS71_05229 [Streptococcus pneumoniae
           SP3-BS71]
 gi|301799286|emb|CBW31812.1| unnamed protein product [Streptococcus pneumoniae OXC141]
          Length = 450

 Score = 36.6 bits (83), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 67/178 (37%), Gaps = 2/178 (1%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           K+M R  N+   +A   +A  + E+      N ++  +  + L +     +  +IL+   
Sbjct: 252 KDMNRTYNDPTSQAYNIYAQLISELGTARSNNNKSITELEANLGVATGQDKAHSILASNE 311

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+ Y          QQ Q + ++    K  Y+ A V    I  V KG    V       
Sbjct: 312 GTLHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKVDVAITGVNS 371

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEV 413
            +    K  + +ID     Q+        Y+V++++  L        + L+   P EV
Sbjct: 372 QKYGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVILQKDMPVEV 429


>gi|118602926|ref|YP_904141.1| dehydrogenase catalytic domain-containing protein [Candidatus
          Ruthia magnifica str. Cm (Calyptogena magnifica)]
 gi|118567865|gb|ABL02670.1| catalytic domain of components of various dehydrogenase complexes
          [Candidatus Ruthia magnifica str. Cm (Calyptogena
          magnifica)]
          Length = 502

 Score = 36.6 bits (83), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 9/58 (15%)

Query: 40 IEISVSSSGEILNEDNVV---------EIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
          IEI V+   +I  +D+++         EI SPF+GI+ K +V  G +I QG+ +L+ E
Sbjct: 21 IEILVNIGDKINTDDSIITLESNKVSMEISSPFTGIVTKIEVNIGDKIKQGSAILSVE 78


>gi|262371392|ref|ZP_06064710.1| HlyD family secretion protein [Acinetobacter johnsonii SH046]
 gi|262313729|gb|EEY94778.1| HlyD family secretion protein [Acinetobacter johnsonii SH046]
          Length = 479

 Score = 36.6 bits (83), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 59/344 (17%), Positives = 135/344 (39%), Gaps = 19/344 (5%)

Query: 19  RMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           RMTL  I +  + L+ W+    ++      G+++    +  I+S   G+++K  V+ G  
Sbjct: 66  RMTLYIIAVTFVCLLLWAGFAKVDEITRGEGKVIPSQQMQVIQSVDGGVVEKVYVQEGEH 125

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L+  +    T  ++     I  L+  +    + L+        +          
Sbjct: 126 VKKGDLLIRIDPTRFTSNLNEVNAKIFALQTKVRRLSAQLNGSGYTSGSVPAGVSPDAAA 185

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ- 196
           ++          ++   Y   S+    +  +T   ++   + + +   + L     ++Q 
Sbjct: 186 MI---------MAQESQYYAESLRELSQRTMTNQGTVSTRQQESQRAQAALGQAERAYQL 236

Query: 197 --KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEA 251
             ++L   + L +  AVS+ D+ + ER V  +  E ++   N+   +  +        EA
Sbjct: 237 AVRELNTTRPLLKTGAVSEMDILRLERDVSNADGERKQAAANLRGSQASIGEAQSRTSEA 296

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +   N  +    + +    +  + +S +    KT + ++  + I   I +N   +    
Sbjct: 297 AVSLKNQWRNELAEAQAQLVSLKESISGVADRVKTTDIRSPTNGIVQKIFFN---TIGGV 353

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            + S  + +IVP      + AKV+PK I  V+    A ++F  Y
Sbjct: 354 VKPSDQVAEIVPLDGQLIVEAKVSPKDIAFVRPDLPAVIKFTAY 397


>gi|327405977|ref|YP_004346815.1| hypothetical protein Fluta_4015 [Fluviicola taffensis DSM 16823]
 gi|327321485|gb|AEA45977.1| hypothetical protein Fluta_4015 [Fluviicola taffensis DSM 16823]
          Length = 432

 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 66/346 (19%), Positives = 135/346 (39%), Gaps = 85/346 (24%)

Query: 39  PIEISVSSSGE----ILNEDNVVE-------IKSPFSGIIKKFQVENGSQI--------- 78
           P+++ V SSGE    IL ++++VE       IKS  S   K + V   +++         
Sbjct: 68  PVKLVVKSSGELEHLILTDNSMVEKNQTIASIKSTLSDNAKAYLVVELAEVRKSYINNSL 127

Query: 79  ----LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
               L+ TP+L F D++T     + K ++KN +  I+ + ++ + LN    +        
Sbjct: 128 QKLDLKNTPML-FGDLQTN--YSILKNALKNYKYLINDDNTSFNMLNVSQQI------KN 178

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           ++ L+  + K  ++ +K                                       L+S+
Sbjct: 179 QKALMQLISKELNSVNK---------------------------------------LVSN 199

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
                   K L+EK  +SQ +  ++E+    +  E+        N L            +
Sbjct: 200 AGNKFKSDKTLYEKGVISQAEFFEREKAYETAIGEI--------NNLEKTKITTAITITD 251

Query: 255 FANYLKEISRDLEQNQRTFADEM-SKLTILEKT----REQKTILSPIAGTIVYNQSFSSS 309
               L ++  + EQ ++T   E+ ++L++LE           I+SPI G + Y  + S +
Sbjct: 252 LEKQLNDLRFNFEQRKKTLLLEIDTQLSVLENALLTWSRNYQIVSPIKGKLTYLLTLSEN 311

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            + +Q + L  ++P ++      K+       VK G    ++  ++
Sbjct: 312 QFIEQGKELFAVIPENQEYVAHLKIPKSGYGKVKVGQKVMLKIDNF 357


>gi|299822502|ref|ZP_07054388.1| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
          [Listeria grayi DSM 20601]
 gi|299816031|gb|EFI83269.1| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase
          [Listeria grayi DSM 20601]
          Length = 546

 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 26/43 (60%)

Query: 49 EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
          E+ N+ +V EI SP  G +K+  VE G+    G  L+TF+ +E
Sbjct: 38 EVQNDKSVEEITSPVDGTVKEILVEEGTVATVGQSLITFDGVE 80


>gi|168487067|ref|ZP_02711575.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|225857982|ref|YP_002739492.1| hypothetical protein SP70585_0182 [Streptococcus pneumoniae 70585]
 gi|183570031|gb|EDT90559.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|225722007|gb|ACO17861.1| conserved hypothetical protein [Streptococcus pneumoniae 70585]
          Length = 450

 Score = 36.2 bits (82), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 37/178 (20%), Positives = 67/178 (37%), Gaps = 2/178 (1%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           K+M R  N+   +A   +A  + E+      N ++  +  + L +     +  +IL+   
Sbjct: 252 KDMNRTYNDPTSQAYNIYAQLISELGTARSNNNKSITELEANLGVATGQDKAHSILASNE 311

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+ Y          QQ Q + ++    K  Y+ A V    I  V KG    V       
Sbjct: 312 GTLHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKVDVAITGVNS 371

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEV 413
            +    K  + +ID     Q+        Y+V++++  L        + L+   P EV
Sbjct: 372 QKYGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVILQKDMPVEV 429


>gi|6531349|gb|AAF15372.1|U66588_4 PaxD [Pasteurella aerogenes]
          Length = 477

 Score = 36.2 bits (82), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 76/347 (21%), Positives = 147/347 (42%), Gaps = 48/347 (13%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           I  SI+  +EI  S++G+++   +  EIK   + ++K   V++G  + QG  LL    + 
Sbjct: 72  ILISIVSKVEIVASATGKLVFSGHSKEIKPIENALVKDIFVKDGQFVKQGQLLLNLTALG 131

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                DL+K  +      +  EK  LD    +Y VL  + E     LLDF     +  + 
Sbjct: 132 AD--ADLQKTQVA-----LGLEK--LD--GYRYSVLLYSIEHNRLPLLDF---NQANFNA 177

Query: 152 VFNYGISSVYRSLKMKL-TRMRSIYLNRLDLENKSSLLRALLSSHQK----------DLT 200
           V     ++    +  +  T  +  Y   L  + K +  + +L++ +K           L+
Sbjct: 178 VKEEDKTNTRHLITEQFETWQKQKYQKELAYQRKQAEKQTVLANIRKYETTSRIEKEKLS 237

Query: 201 MMKNLFEKNAVSQNDLNQQER---------IVYKSTL-ELRENIHEQKNMLRHINELYDE 250
             K L+   ++S+++L  QE           VY+S L E+  ++ + K  L  + +L+  
Sbjct: 238 DFKKLYHVKSISKHELLAQENRYVEAINELSVYQSHLKEVESDLLQAKEELELVTQLFKS 297

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
             LE           L+QN++       +L   E+ +    I +P++GT+   ++ +   
Sbjct: 298 DLLE----------KLQQNRQRDKQLTLELEKNEQRQLASIIRAPVSGTVQQLKTHTKGG 347

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR---FPH 354
               ++ LM I P   +  + A +  K I  V+ G    ++   FP+
Sbjct: 348 VVTTAETLMVIAPEEDVLEVSALIQNKDIGFVEIGQGVVIKVETFPY 394


>gi|17549404|ref|NP_522744.1| putative hemolysin-type secretion transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17431657|emb|CAD18334.1| probable typeIsecretion system transmembrane protein [Ralstonia
           solanacearum GMI1000]
          Length = 358

 Score = 36.2 bits (82), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 17/145 (11%)

Query: 273 FADEMSKLTILEKTRE------QKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVPHS 325
           +A  M+ L  L K RE      ++T+++  A  IV +   S+          LM+IVP  
Sbjct: 182 YASTMADLGPLLKVREGRADQLRRTVITSPARGIVKDIRVSTIGGVVGAGGVLMEIVPLD 241

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQT 383
               I A+++P+ I  +  G  ATV+   +         A +E+I P  I  Q D  +  
Sbjct: 242 DQLLIEARLSPRDIAFIHPGQEATVKITAFESSIYGSLPARVERISPDTIEDQVDRRV-- 299

Query: 384 QEYYEVILKITDLAFSDNNIELRNG 408
             YY  +  +T  A+    +E ++G
Sbjct: 300 --YYYRVYALTRHAY----LETKDG 318


>gi|330888114|gb|EGH20775.1| RND family efflux transporter MFP subunit [Pseudomonas syringae pv.
           mori str. 301020]
          Length = 317

 Score = 36.2 bits (82), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 33/162 (20%), Positives = 68/162 (41%), Gaps = 20/162 (12%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLP---------------IEISVSSSGEILNE 53
           +KR+ P     +  L +  +I +  W I+ P               IE SV++ G  L  
Sbjct: 1   MKRSRPPRRALLVALCLFPVIAVCAWQIM-PDSKGHAATVTVTRSNIENSVTALG-TLQP 58

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            + V++ S  +G I K   + G Q+ +G  L+  +       +D  + +I+NL+  +  +
Sbjct: 59  RSYVDVGSQATGQIMKIHAQVGDQVKEGDLLVEIDPSTQKARLDAARYAIENLKAQLQEQ 118

Query: 114 KSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKV 152
           ++  +    K      L     +R E +     ++ +T ++V
Sbjct: 119 RALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARV 160


Searching..................................................done


Results from round 2




>gi|254780386|ref|YP_003064799.1| Type I secretion membrane fusion protein, HlyD [Candidatus
           Liberibacter asiaticus str. psy62]
 gi|254040063|gb|ACT56859.1| Type I secretion membrane fusion protein, HlyD [Candidatus
           Liberibacter asiaticus str. psy62]
          Length = 440

 Score =  481 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 440/440 (100%), Positives = 440/440 (100%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK
Sbjct: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL
Sbjct: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD
Sbjct: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM
Sbjct: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI
Sbjct: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE
Sbjct: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT
Sbjct: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420

Query: 421 TLAQEIIHPITDNWPKIFER 440
           TLAQEIIHPITDNWPKIFER
Sbjct: 421 TLAQEIIHPITDNWPKIFER 440


>gi|315122201|ref|YP_004062690.1| Type I secretion membrane fusion protein, HlyD [Candidatus
           Liberibacter solanacearum CLso-ZC1]
 gi|313495603|gb|ADR52202.1| Type I secretion membrane fusion protein, HlyD [Candidatus
           Liberibacter solanacearum CLso-ZC1]
          Length = 441

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 306/441 (69%), Positives = 363/441 (82%), Gaps = 1/441 (0%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M++  WKN K++H  +L +  +LS IGI+GLI WSILLPIEI VSS GEIL ++++VEIK
Sbjct: 1   MYNIFWKNFKKHHLTTLAKTIILSTIGIVGLIIWSILLPIEIRVSSLGEILYDNDIVEIK 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           SPFSGII KFQV NG+Q+LQG PLLTFED ET DL++LKK SI +L+C IDT  SAL+FL
Sbjct: 61  SPFSGIINKFQVNNGAQVLQGDPLLTFEDTETNDLLNLKKSSITDLKCRIDTANSALNFL 120

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           N+KYDV+++AF+ R+EQLLDFL  Y  TCSKVFNY IS +YRSLK+KLTR  ++Y N LD
Sbjct: 121 NSKYDVIKRAFDIRDEQLLDFLRNYPPTCSKVFNYEISKLYRSLKLKLTRTHNLYSNYLD 180

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE+K SL   LL SH+KDLT+ KNLF+ N VS+N+LNQQER+V+KS LEL  +++ QK M
Sbjct: 181 LEDKISLSNMLLLSHKKDLTITKNLFKDNVVSKNELNQQERVVHKSALELTTDLNAQKAM 240

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           LRHINELYDEAN+EFANYLK+ISRDL+ NQRT  DE+SK TILEK   Q TILSPI GTI
Sbjct: 241 LRHINELYDEANVEFANYLKDISRDLDHNQRTLIDEISKATILEKKISQHTILSPIMGTI 300

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           VYNQSFSSSNY Q+SQ LMKIVP   LT+IRAKV P+QIQ VK G  ATVRFPHY DIRE
Sbjct: 301 VYNQSFSSSNYIQESQLLMKIVPRCDLTHIRAKVAPQQIQSVKNGQIATVRFPHYPDIRE 360

Query: 361 KKFKAIIEKIDPIISQQDNN-LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           KKFKAIIE I+PIISQ++N+  QTQ YYEVILKI D A+ DN IELRNG+ AE+LFTA+ 
Sbjct: 361 KKFKAIIETINPIISQRNNDSSQTQNYYEVILKIIDPAYFDNKIELRNGYLAEILFTAEY 420

Query: 420 TTLAQEIIHPITDNWPKIFER 440
           TTLA+EII PIT+NWPKIFER
Sbjct: 421 TTLAKEIIRPITNNWPKIFER 441


>gi|82702410|ref|YP_411976.1| Type I secretion membrane fusion protein, HlyD [Nitrosospira
           multiformis ATCC 25196]
 gi|82410475|gb|ABB74584.1| Type I secretion membrane fusion protein, HlyD [Nitrosospira
           multiformis ATCC 25196]
          Length = 454

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 73/424 (17%), Positives = 150/424 (35%), Gaps = 13/424 (3%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +    + + G+ G + W+ L P++  V  SG ++   N   ++    G I+   V+ G  
Sbjct: 36  RLGWWIVVGGVGGFLLWASLAPLDKGVPLSGTVMVATNRKAVQHQTGGTIEDIPVKEGDV 95

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESR 134
           +  GT L+    ++     +  +V     R     +  E+     +    ++     +  
Sbjct: 96  VKAGTVLVRMNSVQVKANAETMRVQYFAARAAEARLIAERDGKKEIVFPRELENMKSDP- 154

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                  +  Y     ++F+  +  +   L      +  + L    LE      +  L  
Sbjct: 155 ------IVATYIDMQKQLFSSRLLGIQSELSGIDESISGLKLQTSGLEESRDNKKQQLKF 208

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             + L  M++L  +  V++N L + ER   +    + E+I       R I EL       
Sbjct: 209 LGEQLEGMRDLAAEGYVARNRLLELERTYAQINGSISEDIGNIGRARRQIVELKLRRVQR 268

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              Y KE+  +L + Q+       KL+ L+       + +P+ GT+V    F+       
Sbjct: 269 QQEYQKEVRSELTEVQKEAEALAHKLSGLDYELANVLVKAPVDGTVVGLNVFTRGGVVSP 328

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              +M IVP      +   +    I  V         F  +          I+  +    
Sbjct: 329 GFKMMDIVPSDDPLTVEGHLPVHLIDKVHPDLPVEFIFTAFNRNLTPHVPGIVTHVSADR 388

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
              ++    + YY++  K+         ++++R G P E+       T+   I+ PI D+
Sbjct: 389 LVDED--SGEPYYKLQAKVAPEGMKMIADLQIRPGMPVELFVKTGERTMMNYILKPILDH 446

Query: 434 WPKI 437
           +   
Sbjct: 447 FKMA 450


>gi|90578132|ref|ZP_01233943.1| putative secretion protein, HlyD family [Vibrio angustum S14]
 gi|90441218|gb|EAS66398.1| putative secretion protein, HlyD family [Vibrio angustum S14]
          Length = 464

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 76/442 (17%), Positives = 165/442 (37%), Gaps = 16/442 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + I+       W+    ++   + SG+++    +  +++ 
Sbjct: 17  DDKSAALLLNTPKSARVILWVMILFFFTAFIWAYFAKLDKVTTGSGKVIPSSQLQIVQNL 76

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDF 119
             GI+KK  V+ G Q+ +G  LL  +D +       K  S+ +++     ++   +++  
Sbjct: 77  EGGIVKKVLVKEGEQVKKGQTLLLIDDTQFKSDFKEKTQSLASMQADSQRLNALLASVTV 136

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS-------VYRSLKMKLTRMR 172
            N   +   +   + E +   F   +     ++    ++        +   L +   +  
Sbjct: 137 SNKADNTHWRNSVTIERKPPVFDDAFKKAHPELVRRQLNQFTDKLNNLQNQLSVASEQAS 196

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  + +++ S LR+  S  +K+  + K L E+  V + +L + +R +  +  +L  
Sbjct: 197 QKERELAETQSRVSNLRSSYSIARKEYNITKPLAEEGVVPRIELLKLQRSLNDTKRDLNS 256

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +       I E   +       +  +I   L +              LE   ++ T+
Sbjct: 257 AKMQIPVTQAAIQEAGFKYIDIALQFRSDIQAQLNETSDKLGSLTETQIGLEDRVKRTTV 316

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GTI      +     Q   PL++IVP      I AK+ PK I  ++ G  A ++F
Sbjct: 317 VSPVTGTIQKIHVNTVGGVIQPGMPLVEIVPTEDTLLIEAKIAPKDIGFLRPGLPAVIKF 376

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y           +E I     Q     +   +Y+V ++    +    N   + +  G 
Sbjct: 377 SAYDFTSYGGLHGTLETISADTIQD---KEGNSFYQVRIRTDTSSLKGPNGEALPIIPGM 433

Query: 410 PAEVLFTAKNTTLAQEIIHPIT 431
            A V       ++   ++ PI 
Sbjct: 434 TATVDIITGKRSVLDYLLKPIL 455


>gi|149187823|ref|ZP_01866119.1| secretion protein, HlyD family [Vibrio shilonii AK1]
 gi|148838219|gb|EDL55160.1| secretion protein, HlyD family [Vibrio shilonii AK1]
          Length = 463

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 75/448 (16%), Positives = 163/448 (36%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  I    W+    I+      G+++    V  I++ 
Sbjct: 18  DDKTAALLLNTPTSARIMLWVMVLFFISAAVWASWAEIDKVTVGQGKVIPSSQVQVIQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V+ G  + +G  LL  +D         ++  + NL  ++    ++L  +  
Sbjct: 78  EGGLVKEILVKEGDTVKKGQQLLLIDDTRFRSDYREREQQVLNLTANVLQLSASLTSVVI 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             DV +K ++          +      +      +     +   ++ +   L +   ++R
Sbjct: 138 NEDVKDKEWQKSVTLDFNKLAFPPTFEEENKALVARQRAEYRQDLNKLRNELSVIDQQVR 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   LR   +  + +L + K L ++  V + +L + +R V  +  EL  
Sbjct: 198 QKQQDLIEIQARVHNLREGYNLARDELNITKPLADEGVVPKVELLKLQRQVNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   I E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 TELKVPALKSAIQESMLSRIDIAQKFRSEQQEKLNQAQDKLSSMTESAVGLEDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++    A V+F
Sbjct: 318 VSPVNGTVKTLNVNTVGGVIQPGMDIVEIVPTEDTLLVEAKIAPQDIAFLRPDLHAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   +       +E I    +Q +       +Y V ++     F  D  + +  G  A
Sbjct: 378 SAYDFTKYGGLDGTLEHISADTTQDEE---GNSFYIVRVRTDKTNFGHDEQLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+   ++ PI        +
Sbjct: 435 SVDIITGKRTVLDYLLKPILSAQNNALK 462


>gi|89075160|ref|ZP_01161596.1| putative secretion protein, HlyD family protein [Photobacterium sp.
           SKA34]
 gi|89049114|gb|EAR54680.1| putative secretion protein, HlyD family protein [Photobacterium sp.
           SKA34]
          Length = 464

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 78/442 (17%), Positives = 159/442 (35%), Gaps = 16/442 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + I+  I    W+    ++   + SG+++    +  +++ 
Sbjct: 17  DDKSAALLLNTPKSARIILWVMILFFITAFIWAYFAKLDKVTTGSGKVIPSSQLQVVQNL 76

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL-- 120
             GI+KK  V  G Q+ +G  LL  +D +       K  S+  ++       + L  +  
Sbjct: 77  EGGIVKKVLVREGEQVKKGQTLLLIDDTQFKSDFKEKTQSLAAMQADSLRLNALLASVIV 136

Query: 121 ---NNKYDVLEKAFESREEQLLDFL-----GKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
               +K          R+  L D        K        F   ++++   L +   +  
Sbjct: 137 SDSADKTHWRNSVTLDRKTPLFDDTFTKAHPKLVRRQLNQFTDKLNNLQNQLSVASEQAS 196

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  + +++ + LR+  +   K+  + K L E+  V + +L + +R +  +  +L  
Sbjct: 197 QKERELAETQSRVNNLRSSYNIALKEYNITKPLAEEGVVPRIELLKLQRSLNDTKRDLNS 256

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +       I E   +       +  +I   L +              LE   ++ T+
Sbjct: 257 AKMQIPVTQAAIQEAGFKYIDIALQFRSDIQAQLNETSDKLGSLSETQIGLEDRVKRTTV 316

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GTI      +     Q   PL++IVP      I  K+ PK I  ++ G  A ++F
Sbjct: 317 ISPVTGTIQKIHVNTVGGVIQPGMPLVEIVPTEDTLLIETKIAPKDIGFLRPGLPAIIKF 376

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y           +E I     Q     +   +Y+V ++    +    N   + +  G 
Sbjct: 377 SAYDFTSYGGLHGTLETISADTIQD---KEGNSFYQVRVRTDTSSLKGPNGEALPIIPGM 433

Query: 410 PAEVLFTAKNTTLAQEIIHPIT 431
            A V       ++   ++ PI 
Sbjct: 434 TATVDIITGKRSVLDYLLKPIL 455


>gi|169144770|gb|ACA49155.1| EsfB [Serratia marcescens]
          Length = 443

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 72/431 (16%), Positives = 165/431 (38%), Gaps = 13/431 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + +  +     +   L   +G+ G + W+   P++  V+S G +    N   +++P SGI
Sbjct: 14  EQIPLDERRYTRLGWLALGVGVFGFLAWAAFAPLDKGVASPGSVTVSGNRKTVQAPASGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNK 123
           IK   V++G ++  G  L+    ++    +D  +            +  E+  L  +   
Sbjct: 74  IKNIVVKDGDKVKAGEVLVQLSQVQAQAQVDSLRDQYYTTLATEGRLLAERDGLSKVTFS 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +   + R  +++    +  ++  +     I    +S+     +++ +  +R + + 
Sbjct: 134 PVFAQVKDQPRVAEIIALQTQLFASRRQGLQSEIDGYKQSMDGIRFQLKGLQDSRANKQI 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + S LR       + +  MK L     + +N   + +R   +    + E +     + + 
Sbjct: 194 QLSSLR-------EQMNSMKQLAADGYLPRNRYLEIQRQFAEVNSSIDETVGRIGQLQKQ 246

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           + E     +  FA+Y +E+   L Q Q   ++  +KL + +       I SP+ GT+V  
Sbjct: 247 LQESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLQMADFDLGNTAITSPVDGTVVGL 306

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             F+          LM +VP      + +++    I  V  G    + F  +   +  K 
Sbjct: 307 NIFTQGGVVGAGDHLMDVVPSQATLVVDSRLKVDLIDKVYNGLPVDLMFTAFNQNKTPKI 366

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTL 422
              +  +         N   + YY++ + ++       +  +++ G P EV     + +L
Sbjct: 367 PGTVTLVSADRLVDKTN--GEPYYQMQVTVSPEGMKMLSGEDIKPGMPVEVFVKTGSRSL 424

Query: 423 AQEIIHPITDN 433
              +  PI D 
Sbjct: 425 LSYLFKPILDR 435


>gi|157825557|ref|YP_001493277.1| alkaline protease secretion protein AprE [Rickettsia akari str.
           Hartford]
 gi|157799515|gb|ABV74769.1| Alkaline protease secretion protein AprE [Rickettsia akari str.
           Hartford]
          Length = 511

 Score =  355 bits (912), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 92/442 (20%), Positives = 166/442 (37%), Gaps = 17/442 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+ +   + +     + I  ++    WS L P++    + G ++   N   I+    GII
Sbjct: 75  NVAQAARSPILFGIYVIIFLVLIGGLWSALAPLDSGAVAVGIVIPSTNKKTIQHNEGGII 134

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
               V+ G ++ +G  L+  E+       +      +N       +  E+  L+ +    
Sbjct: 135 NAIYVKQGDKVKEGDKLIELEETRIKSEHENVLGQYRNFLATENRLIAERDHLEQIEFSD 194

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            ++         +++        +  +V+N    ++Y+++     ++         LE K
Sbjct: 195 FLMHDINLPEVAKIIHTQENLFRSRKEVYNSEKDALYQNIAQLEKKIE-------GLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  ++ L EK  V +  L  QE  V  S  ++     E   +   I
Sbjct: 248 KVAALKTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAASKSDVATTEAEIAGIRHAI 307

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E   +   +   Y +    +L + Q   A    K   L  +  +  I SP+ G +   +
Sbjct: 308 TETQIKIINQQNKYTERTLTELREAQVQTASLKEKYNSLTDSLNRVIIRSPVDGIVNNLK 367

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F 
Sbjct: 368 YHTIGGVISHGQPIMEISPINDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFT 427

Query: 365 AIIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFSD----NNIELRNGFPAEVLFTA 417
             +  I P I Q +     Q+   YY   ++I   AF       N+EL  G  AEV    
Sbjct: 428 GKVVSISPDIVQDERQHPGQQQDNYYVARIEIDMDAFDKVAKVKNLELHPGMQAEVQIVT 487

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
              TL + ++ PITD   K F 
Sbjct: 488 GTRTLLRYLLDPITDTAFKAFR 509


>gi|153833579|ref|ZP_01986246.1| secretion protein, HlyD family [Vibrio harveyi HY01]
 gi|148870106|gb|EDL69053.1| secretion protein, HlyD family [Vibrio harveyi HY01]
          Length = 463

 Score =  355 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 74/448 (16%), Positives = 169/448 (37%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  +  I W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPNSARLMLWVMVLFFVAAIGWASWAEIDKVTVGQGKVIPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V+ G Q+ +G  LL  +D         ++  + NL   +    ++++ +  
Sbjct: 78  EGGLVKEILVKEGQQVEKGQQLLLIDDTRFRSDFREREQQVANLTASVLQLSASINSVEV 137

Query: 123 KYDVLEKAFESR----------EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D  +  +E               L +   +        +   + ++   + +   +++
Sbjct: 138 NRDFDDSNWEKNVVIDYGKLTFPPTLEENRPRLTQRQKAEYREDLDNLRNQISVIDQQVK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ + S LR      +K+L + K L ++  V + +L + +R V  +  E+  
Sbjct: 198 QKQQDLVEIQARVSNLRQSYRYAKKELDITKPLADEGVVPRIELLKLQRQVNDTRREMTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   M   I E           +  E    L   Q   +  +     LE    +  +
Sbjct: 258 SELKIPVMKSGIRESMLNRIDVALKFRSEQQEKLNSTQDQLSALVESAVGLEDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GTI      +     Q    +++IVP      + AK+ PK I  ++    A V+F
Sbjct: 318 VSPVTGTIKTLNVNTVGGVIQPGMDIVEIVPTEDTLLVEAKIAPKDIAFLRPDLHAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   +    +  +E I    +Q +       +Y V ++    +F  D ++ +  G  A
Sbjct: 378 TAYDFTKYGGLEGELEHISADTTQDEE---GNSFYIVRVRTEKTSFGQDADLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 435 SVDIITGKRTVLEYLLKPILSAKTNALK 462


>gi|157964390|ref|YP_001499214.1| HlyD family secretion protein [Rickettsia massiliae MTU5]
 gi|157844166|gb|ABV84667.1| HlyD family secretion protein [Rickettsia massiliae MTU5]
          Length = 512

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 90/442 (20%), Positives = 167/442 (37%), Gaps = 17/442 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+ +   + +     + I  ++    WS L P++    + G ++   N   I+    GII
Sbjct: 76  NVAQAARSPILFGIYVIIFLVLIGGLWSALAPLDSGAVAVGIVMPSTNKKTIQHHEGGII 135

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
               V+ G ++ +G  L+  E+       +      +N       +  E+  L  +    
Sbjct: 136 NAIYVKQGDKVKEGDKLIELEETRIKSEHENILGQYRNFLATENRLIAERDNLAQIEFSD 195

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +++        +++       S+  +V+N    ++Y+++     ++         LE K
Sbjct: 196 FLMQDINLPEVAKIIHTQENLFSSRKEVYNSEKDALYQNIAQLEKKIE-------GLEAK 248

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  ++ L EK  V +  L  QE  V  +  ++     E   +   I
Sbjct: 249 KVAASKTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAAAKSDVATTEAEIAGIRHAI 308

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E   +   +   Y +    +L + Q   A    K   L  +  +  I SP+ G +   +
Sbjct: 309 TETQIKIINQQNKYTERTLTELREAQVQTASLKEKYNALTDSLNRVIIRSPVDGIVNNLK 368

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F 
Sbjct: 369 YHTIGGVISHGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFT 428

Query: 365 AIIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFSD----NNIELRNGFPAEVLFTA 417
             +  I P I Q +     Q+   YY   ++I    F+      N+EL  G  AEV    
Sbjct: 429 GKVVSISPDIVQDERQHPGQQQDNYYVARVEIDMDEFNKVAKVKNLELHPGMQAEVQIVT 488

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
              TL + ++ P+TD   K F 
Sbjct: 489 GTRTLLRYLLDPVTDTAFKAFR 510


>gi|238650762|ref|YP_002916617.1| type I secretion adaptor protein [Rickettsia peacockii str. Rustic]
 gi|238624860|gb|ACR47566.1| type I secretion adaptor protein [Rickettsia peacockii str. Rustic]
          Length = 511

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 90/442 (20%), Positives = 168/442 (38%), Gaps = 17/442 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+ +   + +     + I  ++    WS L P++    + G ++   N   I+    GII
Sbjct: 75  NVAQAARSPILFGIYVMIFLVLIGGLWSALAPLDSGAVAVGIVMPSTNKKTIQHHEGGII 134

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
               V+ G ++ +G  L+  E+       +      +N       +  E+  L+ +    
Sbjct: 135 NAIYVKQGDKVKEGDKLIELEETRIKSEHENILGQYRNFLATENRLIAERDNLEQIEFSD 194

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +++        +++        +  +V+N    ++++++     ++         LE K
Sbjct: 195 FLMQDINLPEVAKIIHTQENLFRSRKEVYNSEKDALHQNIAQLEKKIE-------GLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  ++ L EK  V +  L  QE  V  S  ++     E   +   I
Sbjct: 248 KVAASKTAEVYQDRLKALRTLKEKGFVKKAALLDQEAKVAASKSDVATTEAEIAGIRHAI 307

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E   +   +   Y +    +L + Q   A    K   L  +  +  I SP+ G +   +
Sbjct: 308 TETQIKIINQQNKYTERTLTELCEAQVQTASLKEKYNALTDSLNRVIIRSPVDGIVNNLK 367

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F 
Sbjct: 368 YHTIGGVISHGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRITPTFT 427

Query: 365 AIIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFSD----NNIELRNGFPAEVLFTA 417
             +  I P I Q +     Q+   YY   ++I   AF+      N+EL  G  AEV    
Sbjct: 428 GKVVSISPDIVQDERQHPGQQQDNYYVARVEIDMDAFNKVAKVKNLELHPGMQAEVQIVT 487

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
              TL + ++ P+TD   K F 
Sbjct: 488 GTRTLLRYLLDPVTDTAFKAFR 509


>gi|269960076|ref|ZP_06174453.1| secretion protein, HlyD family [Vibrio harveyi 1DA3]
 gi|269835375|gb|EEZ89457.1| secretion protein, HlyD family [Vibrio harveyi 1DA3]
          Length = 463

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 169/448 (37%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P+S + M  + ++  +  I W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPSSARLMLWVMVLFFVAAIGWASWAQIDKVTVGQGKVIPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V+ G Q+ +G  LL  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLVKEILVKEGQQVEKGQQLLLIDDTRFRSDFREREQQVANLTASVLQLSASISSVEV 137

Query: 123 KYD----------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +          VL+    +    L +   +        +   + ++   + +   +++
Sbjct: 138 NREFDNSNWEQNVVLDYGKLTFPPTLEENQPRLTQRQKAEYREDLDNLRSQISVIDQQVK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ + S LR      +K+L + K L ++  V + +L + +R V  +  E+  
Sbjct: 198 QKQQDLVEIQARVSNLRQSYRYAKKELDITKPLADEGVVPRIELLKLQRQVNDTRREMTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E           +  E    L   Q   +  +     LE    +  +
Sbjct: 258 SELKIPVLKSAIRESMLNRIDAALKFRSEQQEKLNSTQDQLSSLVESAVGLEDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GTI      +     Q    +++IVP      + AK+ PK I  ++    A V+F
Sbjct: 318 VSPVTGTIKTLNVNTVGGVIQPGMDIVEIVPTEDTLLVEAKIAPKDIAFLRPDLHAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   +    +  +E I    +Q +       +Y V ++     F  D ++ +  G  A
Sbjct: 378 TAYDFTKYGGLEGELEHISADTTQDEE---GNSFYIVRVRTDKTNFGQDADLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 435 SVDIITGKRTVLEYLLKPILSAKTNALK 462


>gi|157828303|ref|YP_001494545.1| alkaline protease secretion protein AprE [Rickettsia rickettsii
           str. 'Sheila Smith']
 gi|165933008|ref|YP_001649797.1| HlyD family type I secretion adaptor protein [Rickettsia rickettsii
           str. Iowa]
 gi|157800784|gb|ABV76037.1| alkaline protease secretion protein AprE [Rickettsia rickettsii
           str. 'Sheila Smith']
 gi|165908095|gb|ABY72391.1| type I secretion adaptor protein (HlyD family) [Rickettsia
           rickettsii str. Iowa]
          Length = 511

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 89/442 (20%), Positives = 167/442 (37%), Gaps = 17/442 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+ +   + +     + I  ++    WS L P++    + G ++   N   I+    GII
Sbjct: 75  NVAQAARSPILFGIYVMIFLVLIGGLWSALAPLDSGAVAVGIVMPSTNKKTIQHHEGGII 134

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
               V+ G ++ +G  L+  E+       +      +N       +  E+  L+ +    
Sbjct: 135 NAIYVKQGDKVKEGDKLIELEETRIKSEHENILGQYRNFLATENRLMAERDNLEQIEFSD 194

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +++        +++        +  +V+N    ++++++     ++         LE K
Sbjct: 195 FLMQDINLPEVAKIIHTQENLFRSRKEVYNSEKDALHQNIAQLEKKIE-------GLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  ++ L EK  V +  L  QE  V  S  ++     E   +   I
Sbjct: 248 KVAASKTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAASKSDVATTEAEIAGIRHAI 307

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E   +   +   Y +    +L + Q   A    K   L  +  +  I SP+ G +   +
Sbjct: 308 TETQIKIINQQNKYTERTLTELREAQVQTASLKEKYNALTDSLNRVIIRSPVDGIVNNLK 367

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F 
Sbjct: 368 YHTIGGVISHGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFT 427

Query: 365 AIIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFSD----NNIELRNGFPAEVLFTA 417
             +  I P I Q +     Q+   YY   ++I    F+      N+EL  G  AEV    
Sbjct: 428 GKVVSISPDIVQDERQHPGQQQDNYYVARVEIDMDEFNKVAKVKNLELHPGMQAEVQIVT 487

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
              TL + ++ P+TD   K F 
Sbjct: 488 GTRTLLRYLLDPVTDTAFKAFR 509


>gi|261251553|ref|ZP_05944127.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio orientalis CIP 102891]
 gi|260938426|gb|EEX94414.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio orientalis CIP 102891]
          Length = 463

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 70/448 (15%), Positives = 163/448 (36%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  I    W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPNSARIMLWVMVLFFILAGVWASWAEIDKVTVGQGKVVPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G  + +G  LL  +D         ++  + NL   +    ++L  +  
Sbjct: 78  EGGLVKEILVREGQNVTKGQQLLLIDDTRFRSDYREREQQVANLTASVLQLSASLTSVEI 137

Query: 123 KYDVLEKAFESR----------EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D  E  +                L +      +     +   ++ +   + +   +++
Sbjct: 138 NEDFDETNWHDNVKLNFNKLAFPPVLDEQQPNLVARQRAEYRQDLNKLRNQISLIDQQVK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   LR   +  +K+L + + L E+  V + +L + +R V  +  EL  
Sbjct: 198 QKQQDLVEIKARVRNLRDGYNFAKKELEITRPLAEEGIVPRIELLKLQRQVNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  ++  +   I E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 SELKRPVLESAIREAMLSRIDTAQKFRSEQQEKLNQAQDKLSSLTESTVGLEDRVNRTIV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++      V+F
Sbjct: 318 TSPVTGTVKTLNVNTVGGVIQPGMDIVEIVPSEDTLLVEAKIAPQDIAFLRPDLQTIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF-SDNNIELRNGFPA 411
             Y   +    +  +E I    +  +       +Y V ++  + +   DN++ +  G  A
Sbjct: 378 SAYDFTKYGGLEGTLEHISADTTTDEE---GNSFYLVRVRTKETSLDKDNSLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 435 SVDIITGKRTILEYLLKPILSAQNNALK 462


>gi|156978282|ref|YP_001449188.1| hypothetical protein VIBHAR_07089 [Vibrio harveyi ATCC BAA-1116]
 gi|156529876|gb|ABU74961.1| hypothetical protein VIBHAR_07089 [Vibrio harveyi ATCC BAA-1116]
          Length = 486

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 167/448 (37%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  +  +  +  I W+    I+      G+++    +  +++ 
Sbjct: 41  DDKTAALLLNTPNSARLMLWVMALFFVAAIGWASWAEIDKVTVGQGKVIPSSQIQVVQNL 100

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++KK  V+ G ++ +   LL  +D         ++  + NL   +    ++++ +  
Sbjct: 101 EGGLVKKILVKEGQKVQKDQQLLLIDDTRFRSDFREREQQVANLTASVLHLSASINSVEV 160

Query: 123 KYDVLEKAFESR----------EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D  +  +E               L +   +        +   + ++   + +   +++
Sbjct: 161 NRDFDDSNWEKNVVIDYGKLTFPPILEENRPRLTQRQKAEYREDLDNLRSQISVIDQQVK 220

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ + S LR      +K+L + K L ++  V + +L + +R V  +  E+  
Sbjct: 221 QKQQDLVEIQARVSNLRQSYRYAKKELDITKPLADEGVVPRIELLKLQRQVNDTRREMTS 280

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E           +  E    L   Q   +  +     LE    +  +
Sbjct: 281 SELKIPVIKSGIRESMLNRIDVALKFRSEQQEKLNSTQDQLSALVESAVGLEDRVNRTVV 340

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GTI      +     Q    +++IVP      + AK+ PK I  ++    A V+F
Sbjct: 341 VSPVTGTIKTLNVNTVGGVIQPGMDIVEIVPTEDTLLVEAKIAPKDIAFLRPDLHAIVKF 400

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   +    +  +E I    +Q +       +Y V ++    +F  D ++ +  G  A
Sbjct: 401 TAYDFTKYGGLEGELEHISADTTQDEE---GNSFYIVRIRTEKTSFGQDADLPIIPGMTA 457

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 458 SVDIITGKRTVLEYLLKPILSAKTNALK 485


>gi|258624075|ref|ZP_05719027.1| secretion protein, HlyD family [Vibrio mimicus VM603]
 gi|258583685|gb|EEW08482.1| secretion protein, HlyD family [Vibrio mimicus VM603]
          Length = 496

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 75/440 (17%), Positives = 162/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  ITW+    I+      G+++    V  I++ 
Sbjct: 51  DDKTAALLLNTPHSARIILWVMVAFFILAITWAAWAEIDKVTVGQGKVVPSSQVQVIQNL 110

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 111 EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 170

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D  EK +           +    L D   +        +   + ++   L +   +++
Sbjct: 171 NEDFEEKNWTNSVRLDYSKLAFPPVLSDTQPELVDRQRDQYRQDLDNLRNQLSVLSQQIK 230

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR   +  +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 231 QKQQDLIEAEARVVNLRQSYNFAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTS 290

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 291 TELKIPVLKAAVREALLSRINAAQKFRTEQQDKLNQAQDKLSALTESAVGLEDKVNRTVV 350

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 351 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPELPAIVKF 410

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 411 TAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDKNLPIIPGMTA 467

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 468 SVDIITGKRTVLDYLLKPIL 487


>gi|1139568|dbj|BAA08632.1| lipase C [Serratia marcescens]
          Length = 443

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 72/432 (16%), Positives = 165/432 (38%), Gaps = 13/432 (3%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
            + + ++     +   L+  IG+ G + W+   P++  V+S G +    N   +++P SG
Sbjct: 13  TEEIPQDERRFTRMGWLVVGIGLFGFLAWAAFAPLDKGVASPGSVTVSGNRKTVQAPASG 72

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNN 122
           IIK   V +G ++  G  L+    ++    +D  +            +  E+  L  +  
Sbjct: 73  IIKNIAVRDGDKVKAGEVLVQLSQVQAQAQVDSLRDQYYTTLATEGRLLAERDGLSIVTF 132

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +     + R  +++    +  ++  +     I    +S+     +++ +  +R + +
Sbjct: 133 SPILDAVKDKPRVAEIIALQTQLFASRRQALQSEIDGYKQSMDGIRFQLKGLQDSRGNKQ 192

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            + S LR       + +  MK L     + +N   + +R   +    + E +     + +
Sbjct: 193 IQLSSLR-------EQMNSMKQLAADGYLPRNRYLEVQRQFAEVNSSIDETVGRIGQLQK 245

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + E     +  FA+Y +E+   L Q Q   ++  +KL + +       I SP+ GT+V 
Sbjct: 246 QLLESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLQMADFDLGNTAITSPVDGTVVG 305

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
              F+          LM +VP      + +++       V  G    + F  +   +  K
Sbjct: 306 LNIFTQGGVVGAGDHLMDVVPSQATLVVDSRLKVDLFDKVYNGLPVDLMFTAFNQNKTPK 365

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTT 421
               +  +         N   + YY++ + ++       +  +++ G P EV     + +
Sbjct: 366 IPGTVTLVSADRLVDKAN--GEPYYQMQVTVSPEGMKMLSGEDIKPGMPVEVFVKTGSRS 423

Query: 422 LAQEIIHPITDN 433
           L   +  PI D 
Sbjct: 424 LLSYLFKPILDR 435


>gi|34580644|ref|ZP_00142124.1| alkaline protease secretion protein AprE [Rickettsia sibirica 246]
 gi|28262029|gb|EAA25533.1| alkaline protease secretion protein AprE [Rickettsia sibirica 246]
          Length = 511

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 90/442 (20%), Positives = 167/442 (37%), Gaps = 17/442 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+ +   + +     + I  ++    WS L P++    + G ++   N   I+    GII
Sbjct: 75  NVAQAARSPILFGIYVMIFLVLIGGLWSALAPLDSGAVAVGIVMPSTNKKTIQHHEGGII 134

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
               V+ G ++ +G  L+  E+       D      +N       +  E+  L+ +    
Sbjct: 135 NAIYVKQGDKVKEGDKLIELEETRIKSEHDNILGQYRNFLATENRLIAERDNLEQIEFSD 194

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +++        +++        +  +V+N    ++++++     ++         LE K
Sbjct: 195 FLMQDINLPEVAKIIHTQENLFRSRKEVYNSEKDALHQNIAQLEKKIE-------GLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  ++ L EK  V +  L  QE  V  S  ++     E   +   I
Sbjct: 248 KVAASKTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAASKSDVATTEAEIAGIRHAI 307

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E   +   +   Y +    +L + Q   A    K   L  +  +  I SP+ G +   +
Sbjct: 308 TETQIKIINQQNKYTERTLTELREAQVQTASLKEKYNALTDSLNRVIIRSPVDGIVNSLK 367

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F 
Sbjct: 368 YHTIGGVISHGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFT 427

Query: 365 AIIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFSD----NNIELRNGFPAEVLFTA 417
             +  I P I Q +     Q+   YY   ++I    F+      N+EL  G  AEV    
Sbjct: 428 GKVVSISPDIVQDERQYPGQQQDNYYVARVEIDMDEFNKVAKVKNLELHPGMQAEVQIVT 487

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
              TL + ++ P+TD   K F 
Sbjct: 488 GTRTLLRYLLDPVTDTAFKAFR 509


>gi|67458902|ref|YP_246526.1| alkaline protease secretion protein AprE [Rickettsia felis
           URRWXCal2]
 gi|67004435|gb|AAY61361.1| Alkaline protease secretion protein AprE [Rickettsia felis
           URRWXCal2]
          Length = 511

 Score =  353 bits (906), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 88/442 (19%), Positives = 167/442 (37%), Gaps = 17/442 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+ +   + +     + I  ++    W+ L P++    + G ++   N   I+    GII
Sbjct: 75  NVAQAARSPILFGIYVIIFLVLIGGLWAALAPLDSGAVAVGIVMPSTNKKTIQHNEGGII 134

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
               V+ G ++ +G  L+  E+       +      +N       +  E+  L+ +    
Sbjct: 135 NAIYVKQGDKVKEGDKLIELEETRIKSEHENILGQYRNFLATENRLIAERDNLEQIEFSD 194

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +++        +++        +  +V+N    ++++++     ++         LE K
Sbjct: 195 FLMQDINLPEVAKIIHTQENLFRSRKEVYNSEKDALHQNIAQLEKKIE-------GLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  ++ L EK  V +  L  QE  V  S  ++     E   +   I
Sbjct: 248 KVAASKTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAASKSDVATTEAEIAGIRHAI 307

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E   +   +   Y +    +L + Q   A    K   L  +  +  I SP+ G +   +
Sbjct: 308 TETQIKIINQQNKYTERTLTELREAQVQTASLKEKYNSLTDSLNRVIIRSPVDGIVNNLK 367

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F 
Sbjct: 368 YHTIGGVISHGQPIMEISPINDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFT 427

Query: 365 AIIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFSD----NNIELRNGFPAEVLFTA 417
             +  I P I Q +     Q+   YY   ++I    F+      N+EL  G  AEV    
Sbjct: 428 GKVVSISPDIVQDERQHPGQQQDNYYVARVEIDMDEFNKVAKVKNLELHPGMQAEVQIVT 487

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
              TL + ++ P+TD   K F 
Sbjct: 488 GTRTLLRYLLDPVTDTAFKAFR 509


>gi|254224657|ref|ZP_04918273.1| secretion protein, HlyD family [Vibrio cholerae V51]
 gi|125622720|gb|EAZ51038.1| secretion protein, HlyD family [Vibrio cholerae V51]
          Length = 481

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 36  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 95

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 96  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 155

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D            +   + ++   L +   +++
Sbjct: 156 DENFEEKNWTNSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIK 215

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 216 QKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTHRELTS 275

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 276 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 335

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 336 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIVKF 395

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 396 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDQNLPIIPGMTA 452

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 453 SVDIITGKRTVLDYLLKPIL 472


>gi|325982694|ref|YP_004295096.1| type I secretion membrane fusion protein, HlyD family [Nitrosomonas
           sp. AL212]
 gi|325532213|gb|ADZ26934.1| type I secretion membrane fusion protein, HlyD family [Nitrosomonas
           sp. AL212]
          Length = 451

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 70/436 (16%), Positives = 152/436 (34%), Gaps = 13/436 (2%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            +   +K +     K    + + G  G + WS + P++  V   G +    ++  ++   
Sbjct: 19  DLSTQVKTDETTYTKLGWWIVLAGFCGFVLWSSIAPLDKGVPVMGTVTVASHLQAVQHQT 78

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFL 120
            GII    ++ G  +  G  L+   D++     ++ +  +   + +   +  E+   + +
Sbjct: 79  GGIIDDILIKEGDHVKLGQILVRMNDVQIKAQAEITRSQLYAARAIEARLLAERDGANEI 138

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               ++L    + R    +    +  S       + I+++  S      ++R        
Sbjct: 139 TFPKELLGSENDPRVTNNISIQNQLFSARKLALQHEIAAIGESTAGLKLQLR-------G 191

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE   +  +  L   ++ L  +++L     V  N + + ER   + T ++   I +    
Sbjct: 192 LEASMASKKQQLKFLEEQLFSLRDLAMDGFVPHNRVLELERTYTQLTGDISSGIGDIGRT 251

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            R I EL          Y KE+ + L   QR      ++L   +       + +P+ G +
Sbjct: 252 QRQITELEQRRIHRLQEYQKEVRQALSDVQREAEALSNRLIGQDFELANVEVKAPVDGIV 311

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V    F+          LM IVP   +  I  +V    I  +       + F      + 
Sbjct: 312 VGMNVFTKGGVISPGFKLMDIVPSDDMLIITGQVPVHLIDKIHVDLPVDLIFSALNQKKT 371

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKN 419
                I+ ++       +       +Y +  K+T        + ++R G P E+      
Sbjct: 372 PNIPGIVTQVSADRLIDE--HSGFPFYSIKAKVTPEGMKQLTDEQIRAGMPVEIFIKTGE 429

Query: 420 TTLAQEIIHPITDNWP 435
            +L   +  PI D   
Sbjct: 430 RSLMNYLFKPILDRVH 445


>gi|323496474|ref|ZP_08101532.1| HlyD family secretion protein [Vibrio sinaloensis DSM 21326]
 gi|323318751|gb|EGA71704.1| HlyD family secretion protein [Vibrio sinaloensis DSM 21326]
          Length = 463

 Score =  353 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 70/448 (15%), Positives = 166/448 (37%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + +I  I    W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPNSARIMLWIMVIFFILAGVWASWAQIDKVTVGQGKVVPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G+IK   V+ G ++ +G  LL  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLIKDILVQEGQKVEKGQQLLLIDDTRFRSDFREREQQVANLTASVMQLSASITSVEI 137

Query: 123 KYDVLEKAFESR----------EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +   K +++             QL +   +        +   ++ +   + +   +++
Sbjct: 138 NEEFDNKNWQNNVLIDFNKLAFPPQLSELKPRLVERQRAEYRQDLNKLRNQISVIDQQVK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   LR   +  +K+L + K L ++  V Q +L + +R V  +  EL  
Sbjct: 198 QKQQDLVEIQARVRNLRDSYNFARKELDITKPLADEGVVPQIELLKLQRQVNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E           +  E    L + Q   +        LE    +  +
Sbjct: 258 SELKVPVLRSAIREAMLSRIDVAQKFRSEQQEKLNEAQDKLSAMTESAVGLEDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++      V+F
Sbjct: 318 TSPVTGTVKTLNINTVGGVIQPGMDIVEIVPSEDTLLVEAKIAPQDIAFLRPDLPTIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF-SDNNIELRNGFPA 411
             Y   +    +  +E I    +  +       +Y V ++  + +   D+++ +  G  A
Sbjct: 378 SAYDFTKYGGLEGTLEHISADTTTDEE---GNSFYLVRVRTKETSLNKDSSLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 435 SVDIITGKRTVMEYLMKPILGAKNNALK 462


>gi|323494274|ref|ZP_08099386.1| HlyD family secretion protein [Vibrio brasiliensis LMG 20546]
 gi|323311437|gb|EGA64589.1| HlyD family secretion protein [Vibrio brasiliensis LMG 20546]
          Length = 463

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 70/448 (15%), Positives = 167/448 (37%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P+S + M  + +I  +    W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPSSARIMLWVMVIFFVLAGLWASWAEIDKVTVGQGKVVPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G ++ +G  LL  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLVKEILVREGQKVEKGQQLLLIDDTRFRSDYREREQQVANLTASVLQLSASITSVEI 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D  EK ++          +    L +      +     +   ++++   + +   +++
Sbjct: 138 NEDFDEKNWQRNVQLNFNKLAFPPTLNELQPNLVARQRAEYRQDLNNLRNQISLIDQQVK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   LR      +K+L + + L E+  V + +L + +R V  +  EL  
Sbjct: 198 QKQQDLVEIQARIKNLRESYRFAKKELDITQPLAEEGVVPRIELLKLQRQVNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 SELKMPVLKSAIREAMLSRIDAAQKFRSEQQEKLNQAQDKLSSMTESTVGLEDRVNRTIV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++      V+F
Sbjct: 318 TSPVTGTVKTLNVNTVGGVIQPGMDIVEIVPSEDTLLVEAKIAPQDIAFLRPELHTIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF-SDNNIELRNGFPA 411
             Y   +    +  +E I    +  +       +Y V ++  + +   DN++ +  G  A
Sbjct: 378 SAYDFTKYGGLEGTLEHISADTTTDEE---GNSFYLVRVRTKETSLDKDNSLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 435 SVDIITGKRTILEYLLKPILSAQNNALK 462


>gi|262164570|ref|ZP_06032308.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio mimicus VM223]
 gi|262026950|gb|EEY45617.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio mimicus VM223]
          Length = 496

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 75/440 (17%), Positives = 162/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  ITW+    I+      G+++    V  I++ 
Sbjct: 51  DDKTAALLLNTPHSARIILWVMVAFFILAITWAAWAEIDKVTVGQGKVVPSSQVQVIQNL 110

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 111 EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 170

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D  EK +           +    L D   +        +   + ++   L +   +++
Sbjct: 171 DEDFEEKNWTNSVRLDYSKLAFPPVLSDAQPELVDRQRDQYRQDLDNLRNQLSVLSQQIK 230

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR   +  +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 231 QKQQDLIEAEARVVNLRQSYNFAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTS 290

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 291 TELKIPVLKAAVREALLSRINAAQKFRTEQQDKLNQAQDKLSALTESAVGLEDKVNRTVV 350

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 351 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPELPAIVKF 410

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 411 TAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDENLPIIPGMTA 467

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 468 SVDIITGKRTVLDYLLKPIL 487


>gi|157803957|ref|YP_001492506.1| hypothetical protein A1E_03970 [Rickettsia canadensis str. McKiel]
 gi|157785220|gb|ABV73721.1| hypothetical protein A1E_03970 [Rickettsia canadensis str. McKiel]
          Length = 511

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 87/442 (19%), Positives = 161/442 (36%), Gaps = 17/442 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+ +   + +     + I  ++    W+ L P++    + G ++   N   I+    GII
Sbjct: 75  NVVQTARSPILFGIYVIIFLVLIGGLWAALAPLDSGAVAIGIVIPSTNKKIIQHHEGGII 134

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
               V+ G ++ +G  L+  E+       +      ++       +  E+  L+ +    
Sbjct: 135 NNIYVKQGDKVKEGDKLIELEETRIKSEHENILGQYRHFLATENRLIAERDNLEQIEFSD 194

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +++        +++        +  +++N    ++Y+       R+  +      LE K
Sbjct: 195 FLMQDINLPEVAKIIHTQENLFRSRKEIYNSEKDALYQ-------RIAQLEKKIEGLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  ++ L EK  V +  L  QE  V  S  E+     E       I
Sbjct: 248 KVAATKTTEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAASKSEIATTEAEIAGTRHTI 307

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E           Y ++   +L   Q   A    K   L  +  +  I SP+ G +   +
Sbjct: 308 TESQISIINLQNKYTEKTLTELRDAQVQTASLKEKYNALTDSLNRVIIRSPVDGVVNNLK 367

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q +M+I P +    I AKV+ K I  V +G  A +RF  +       F 
Sbjct: 368 YHTIGGVIGHGQTIMEISPINDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFT 427

Query: 365 AIIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFSD----NNIELRNGFPAEVLFTA 417
             +  I P I Q +     Q+   YY   ++I    F+      N+ L  G  AEV    
Sbjct: 428 GKVVSISPDIVQDERQHPGQQQDNYYVARIEIDMDKFNKVAKVKNLALHPGMQAEVQIVT 487

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
              TL + ++ P+TD   K F 
Sbjct: 488 GTRTLLRYLLDPVTDTAFKAFR 509


>gi|254284701|ref|ZP_04959668.1| secretion protein, HlyD family [Vibrio cholerae AM-19226]
 gi|150425486|gb|EDN17262.1| secretion protein, HlyD family [Vibrio cholerae AM-19226]
          Length = 481

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 36  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 95

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 96  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 155

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D            +   + ++   L +   +++
Sbjct: 156 DENFEEKNWTNSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIK 215

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 216 QKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRRELTS 275

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 276 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 335

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 336 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIVKF 395

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 396 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDQNLPIIPGMTA 452

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 453 SVDIITGKRTVLDYLLKPIL 472


>gi|121585959|ref|ZP_01675752.1| secretion protein, HlyD family [Vibrio cholerae 2740-80]
 gi|121728744|ref|ZP_01681759.1| secretion protein, HlyD family [Vibrio cholerae V52]
 gi|147671735|ref|YP_001215003.1| HlyD family secretion protein [Vibrio cholerae O395]
 gi|153816676|ref|ZP_01969343.1| secretion protein, HlyD family [Vibrio cholerae NCTC 8457]
 gi|227812644|ref|YP_002812654.1| secretion protein, HlyD family [Vibrio cholerae M66-2]
 gi|298499841|ref|ZP_07009647.1| secretion protein [Vibrio cholerae MAK 757]
 gi|121549895|gb|EAX59915.1| secretion protein, HlyD family [Vibrio cholerae 2740-80]
 gi|121628966|gb|EAX61417.1| secretion protein, HlyD family [Vibrio cholerae V52]
 gi|126512695|gb|EAZ75289.1| secretion protein, HlyD family [Vibrio cholerae NCTC 8457]
 gi|146314118|gb|ABQ18658.1| secretion protein, HlyD family [Vibrio cholerae O395]
 gi|227011786|gb|ACP07997.1| secretion protein, HlyD family [Vibrio cholerae M66-2]
 gi|227015723|gb|ACP11932.1| secretion protein, HlyD family [Vibrio cholerae O395]
 gi|297541822|gb|EFH77873.1| secretion protein [Vibrio cholerae MAK 757]
          Length = 481

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 36  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 95

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 96  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 155

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D            +   + ++   L +   +++
Sbjct: 156 DENFEEKNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIK 215

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 216 QKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTS 275

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 276 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 335

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 336 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIVKF 395

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 396 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDQNLPIIPGMTA 452

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 453 SVDIITGKRTVLDYLLKPIL 472


>gi|15892351|ref|NP_360065.1| alkaline protease secretion protein AprE [Rickettsia conorii str.
           Malish 7]
 gi|15619497|gb|AAL02966.1| alkaline protease secretion protein AprE [Rickettsia conorii str.
           Malish 7]
          Length = 511

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 88/442 (19%), Positives = 167/442 (37%), Gaps = 17/442 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+ +   + +     + I  ++    WS L P++    + G ++   N   I+    GII
Sbjct: 75  NVAQAARSPILFGIYVMIFLVLIGGLWSALAPLDSGAVAVGIVMPSTNKKTIQHHEGGII 134

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
               V+ G ++ +G  L+  E+       +      +N       +  E+  L+ +    
Sbjct: 135 NAIYVKQGDKVKEGDKLIELEETRIKSEHENILGQYRNFLATENRLIAERDNLEQIEFSD 194

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +++        +++        +  +V+N    ++++++     ++         LE K
Sbjct: 195 FLMQDINLPEVAKIIHTQENLFRSRKEVYNSEKDALHQNIAQLEKKIE-------GLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  ++ L EK  V +  L  QE  V  S  ++     E   +   I
Sbjct: 248 KVAASKTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAASKSDVATTEAEIAGIRHAI 307

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E   +   +   Y +    +L + Q   A    K   L  +  +  I +P+ G +   +
Sbjct: 308 TETQIKIINQQNKYTERTLTELREAQVQTASLKEKYNALTDSLNRVIIRAPVDGIVNSLK 367

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F 
Sbjct: 368 YHTIGGVISHGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFT 427

Query: 365 AIIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFSD----NNIELRNGFPAEVLFTA 417
             +  I P I Q +     Q+   YY   ++I    F+      N+EL  G  AEV    
Sbjct: 428 GKVVSISPDIVQDERQYPGQQQDNYYVARVEIDMDEFNKVAKVKNLELHPGMQAEVQIVT 487

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
              TL + ++ P+TD   K F 
Sbjct: 488 GTRTLLRYLLDPVTDTAFKAFR 509


>gi|153216497|ref|ZP_01950498.1| secretion protein, HlyD family [Vibrio cholerae 1587]
 gi|124114245|gb|EAY33065.1| secretion protein, HlyD family [Vibrio cholerae 1587]
          Length = 481

 Score =  352 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 36  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 95

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 96  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 155

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D            +   + ++   L +   +++
Sbjct: 156 DENFEEKNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIK 215

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 216 QKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRRELTS 275

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 276 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 335

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 336 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIVKF 395

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 396 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDQNLPIIPGMTA 452

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 453 SVDIITGKRTVLDYLLKPIL 472


>gi|254505420|ref|ZP_05117567.1| secretion protein, HlyD family [Vibrio parahaemolyticus 16]
 gi|219551537|gb|EED28515.1| secretion protein, HlyD family [Vibrio parahaemolyticus 16]
          Length = 463

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 68/448 (15%), Positives = 163/448 (36%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  +    W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPNSARIMLWIMVLFFVLAGVWASWAQIDKVTVGQGKVVPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G+IK   V+ G ++ +G  LL  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLIKNILVQEGQKVEKGQQLLLIDDTRFRSDFREREQQVANLTASVMQLSASITSVAI 137

Query: 123 KYDVLEKAFESR----------EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D     +++             QL +   +  +     +   +  +   + +   +++
Sbjct: 138 NEDFDNNTWQNNVLINFNKLAFPPQLSETKPELVARQRAEYRQDLDKLRNQISVVDQQVK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   LR   +  +K+L + K L ++  V + +L + +R V  +  EL  
Sbjct: 198 QKQQDLIEIQARVRNLRDSYNFAKKELDITKPLADEGVVPKIELLKLQRQVNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 SELKVPVLRSAIREAMLSRIDIAQKFRSEQQEKLNQAQDKLSAMTESAVGLEDRVNRTIV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++      V+F
Sbjct: 318 TSPVTGTVKTLYINTVGGVIQPGMDIVEIVPSEDTLLVEAKIAPQDIAFLRPELPTIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF-SDNNIELRNGFPA 411
             Y   +    +  +E I    +  +       +Y V ++  + +   D  + +  G  A
Sbjct: 378 SAYDFTKYGGLEGTLEHISADTTTDEE---GNSFYLVRVRTKETSLNKDETLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 435 SVDIITGKRTVMEYLLKPILGAKNNALK 462


>gi|15601830|ref|NP_233461.1| HlyD family secretion protein [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|153821725|ref|ZP_01974392.1| secretion protein, HlyD family [Vibrio cholerae B33]
 gi|254850238|ref|ZP_05239588.1| secretion protein [Vibrio cholerae MO10]
 gi|9658526|gb|AAF96973.1| secretion protein, HlyD family [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|126520721|gb|EAZ77944.1| secretion protein, HlyD family [Vibrio cholerae B33]
 gi|254845943|gb|EET24357.1| secretion protein [Vibrio cholerae MO10]
          Length = 481

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 36  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 95

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 96  EGGLVKQILVREGEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVII 155

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D            +   + ++   L +   +++
Sbjct: 156 DENFEEKNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIK 215

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 216 QKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTS 275

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 276 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 335

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 336 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKF 395

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 396 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDQNLPIIPGMTA 452

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 453 SVDIITGKRTVLDYLLKPIL 472


>gi|153827806|ref|ZP_01980473.1| secretion protein, HlyD family [Vibrio cholerae 623-39]
 gi|148876651|gb|EDL74786.1| secretion protein, HlyD family [Vibrio cholerae 623-39]
          Length = 481

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 36  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 95

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 96  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 155

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D            +   + ++   L +   +++
Sbjct: 156 DENFEEKNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIK 215

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 216 QKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRRELTS 275

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 276 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 335

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 336 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIVKF 395

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 396 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDQNLPIIPGMTA 452

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 453 SVDIITGKRTVLDYLLKPIL 472


>gi|330447992|ref|ZP_08311640.1| type I secretion membrane fusion, HlyD family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328492183|dbj|GAA06137.1| type I secretion membrane fusion, HlyD family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 464

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 73/442 (16%), Positives = 160/442 (36%), Gaps = 16/442 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + ++  I    W+    ++   + +G+++    +  +++ 
Sbjct: 17  DDKSAALLLNTPKSARVILWVMVLFFITAFVWAYFAKLDKVTTGTGKVIPSSQLQVVQNL 76

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL-- 120
             GI+KK  V+ G Q+ +G  LL  +D +       K  S+  ++       + L  +  
Sbjct: 77  EGGIVKKVLVKEGEQVKKGQTLLLIDDTQFKSDFQEKTQSLAAMQADSLRLNALLASVTV 136

Query: 121 NNKYD--------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           NNK D         +E    + +E       +        F   ++++   L +   +  
Sbjct: 137 NNKSDNTKWRNSVTVESKPPAFDEAFKKAHPELVRRQLNQFTDKLNNLQNQLAVASQQAS 196

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +   + S L++      K+  + K L E+  V + +L + +R +  +  +L  
Sbjct: 197 QKERELAETRARVSNLQSSYGIAMKEYNITKPLAEEGVVPRIELLKLQRSLNDTKRDLNS 256

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +       I E   +       +  +I   L +     +        LE   ++ T+
Sbjct: 257 AKMQIPVTQAAIQEAGFKYIDIALQFRSDIQAQLNETSDKLSSLSETQIGLEDRVKRTTV 316

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GTI      +     Q   PL++IVP      I AK+ P+ I  ++    A ++F
Sbjct: 317 VSPVNGTIQKIHVNTVGGVIQPGMPLVEIVPTEDTLLIEAKIAPQDIGFLRPNLPAIIKF 376

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y           +E I     Q     +   +Y+V ++    +    +   + +  G 
Sbjct: 377 SAYDFTNYGGLHGTLETISADTIQD---KEGNSFYQVRIRTDASSLKGPDGEALPIIPGM 433

Query: 410 PAEVLFTAKNTTLAQEIIHPIT 431
            A         ++   ++ P+ 
Sbjct: 434 TATADIITGKRSVLDYLLKPVL 455


>gi|260776964|ref|ZP_05885858.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260606630|gb|EEX32904.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 463

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 70/448 (15%), Positives = 174/448 (38%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P+S + M  + ++  I    W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPSSARIMLWVMVLFFILAGAWASWAQIDKVTVGQGKVVPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G  + +G  LL  +D         ++  + NL   +    +++  ++ 
Sbjct: 78  EGGLVKEILVREGQIVQKGQQLLLIDDTRFRSDFREREQQVANLTASVLQLSASITSVSV 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D  EK+++          +   +L +   K  +     +   ++++   + +   +++
Sbjct: 138 NEDFSEKSWQQSVQLDFSKLAFPPELEERQPKLVARQRAEYRQDLNNLRNQISVIDQQVK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ + S LR   +  +K+L + K L ++  V + +L + +R V  +  E+  
Sbjct: 198 QKQQDLVEIQARVSNLRESYNFARKELEITKPLADEGVVPRIELLKLQRQVNDTRREMTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E           +  E    L + Q   +        LE    +  +
Sbjct: 258 SELKVPVLRSSIKESMLSRIDAAQKFRSEQQEKLNEAQDKLSALTESTVGLEDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++    A V+F
Sbjct: 318 VSPVTGTVKTLNVNTVGGVIQPGMDIVEIVPSEDTLLVEAKIAPQDIAFLRPELHAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF-SDNNIELRNGFPA 411
             Y   +    +  +E I    +  +       +Y V ++  + +  +D ++ +  G  A
Sbjct: 378 SAYDFTKYGGLEGTLEHISADTTTDEE---GNSFYLVRVRTKETSLNNDTSLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 435 SVDIITGKRTVMEYLLKPILGAKNNALK 462


>gi|262173249|ref|ZP_06040926.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio mimicus MB-451]
 gi|261890607|gb|EEY36594.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio mimicus MB-451]
          Length = 463

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 75/440 (17%), Positives = 162/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  ITW+    I+      G+++    V  I++ 
Sbjct: 18  DDKTAALLLNTPHSARIILWVMVAFFILAITWAAWAEIDKVTVGQGKVVPSSQVQVIQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D  EK +           +    L D   +        +   + ++   L +   +++
Sbjct: 138 NEDFEEKNWTNSVRLDYSKLAFPPVLSDTQPELVDRQRDQYRQDLDNLRNQLSVLSQQIK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR   +  +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 198 QKQQDLIEAEARVVNLRQSYNFAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 TELKIPVLKAAVREALLSRINAAQKFRTEQQDKLNQAQDKLSALTESAVGLEDKVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 318 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPELPAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 378 TAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDKNLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 435 SVDIITGKRTVLDYLLKPIL 454


>gi|15604182|ref|NP_220697.1| alkaline protease secretion protein AprE [Rickettsia prowazekii
           str. Madrid E]
 gi|3860874|emb|CAA14774.1| ALKALINE PROTEASE SECRETION PROTEIN APRE (aprE) [Rickettsia
           prowazekii]
 gi|292571915|gb|ADE29830.1| HlyD family secretion protein [Rickettsia prowazekii Rp22]
          Length = 511

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 88/439 (20%), Positives = 159/439 (36%), Gaps = 11/439 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+ +   + +     + I  ++    WS L P++    + G ++   N   I+    GII
Sbjct: 75  NVAQAARSPILFGIYVIIFLVLIGGLWSALAPLDSGAVAIGIVIPSTNKKTIQHNEGGII 134

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V+ G ++ +G  L+  E+          +  +   R  + TE   +   +N   + 
Sbjct: 135 NAIYVKQGDKVKEGDKLIELEETRIKS---EHENILSQYRNFLATENRLIAERDNLEQIK 191

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
              F  +   L + + K   T   +F       +         +  +      LE K   
Sbjct: 192 FSDFLMQNINLPE-VAKIIHTQENLFKSRKEVYFSEKDAFNQNIAQLEKKIDGLEAKKIA 250

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                  +Q  L  ++ L EK  + +  L +QE  V  +  ++     E   +   I E 
Sbjct: 251 ASKTSEVYQDRLKALRTLKEKGFIQKAALLEQEAKVAAAKSDVATTEAEIAGIRHAITET 310

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +       Y +    +L + Q   A    K   L     +  I SP+ G +   +  +
Sbjct: 311 QIKIINHQNKYTERTLTELREAQIQTASLKEKYNSLTDLLNRVIIRSPVDGIVNNLKYHT 370

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                   QP+M+I P +    I A+++ K I  V +G  A +RF  +       F   +
Sbjct: 371 IGGVISHGQPIMEISPINDPLIIEARISQKNIDSVHEGLVAKIRFSAFKSRTTPTFTGKV 430

Query: 368 EKIDPIISQQDNNLQTQE---YYEVILKITDLAFSD----NNIELRNGFPAEVLFTAKNT 420
             I P I Q +     Q+   YY   ++I    F+      N+ L  G  AEV       
Sbjct: 431 VSISPDIVQDERQHLGQQQDNYYVARIEINMEEFNKVAKVKNLALHPGMQAEVQIVTGTR 490

Query: 421 TLAQEIIHPITDNWPKIFE 439
           TL + ++ P+TD   K F 
Sbjct: 491 TLLRYLLDPVTDTAFKAFR 509


>gi|148976218|ref|ZP_01812942.1| secretion protein, HlyD family [Vibrionales bacterium SWAT-3]
 gi|145964312|gb|EDK29567.1| secretion protein, HlyD family [Vibrionales bacterium SWAT-3]
          Length = 463

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 75/448 (16%), Positives = 171/448 (38%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  I  I WS    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPTSARIMLWMIVLFFIAAIGWSAWAEIDKVTVGQGKVIPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V+ G Q+ +G  LL  +D         ++  + NL  ++    ++L  +  
Sbjct: 78  EGGLVKEILVKEGQQVQKGQQLLLIDDTRFRSDFREREQQVANLTANVLMLSASLTSVVI 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D  EK ++          +   +  +      +     +   ++++   L +   ++ 
Sbjct: 138 NEDFNEKEWKKSVTLDYGKLAFPPKFYEVQPDLVNRQKAEYRQDLNNLKNQLSVFDQQVE 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   L+      +++L + K L ++  V + +L + +R V  +  E+  
Sbjct: 198 QKQQDLVEIKARVRNLKQSYQFARQELDITKPLADEGVVPRIELLKLQRQVNDTRREMTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E          N+  E    L Q Q   +        LE    +  +
Sbjct: 258 SELKIPLLRSAIKEAMLSRIDAALNFRSEQQEKLNQAQDKLSALTESAVGLEDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++   TA V+F
Sbjct: 318 VSPVTGTVKTLGINTVGGVIQPGMDIVEIVPTEDSLLVEAKIAPQDIAFLRPELTAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPA 411
             Y   +    + ++E I    +Q +       +Y V ++     F  N  + +  G  A
Sbjct: 378 SAYDFTKYGGLEGVLEHISADTTQDEE---GNSFYIVRVRTEKHNFGQNEELPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 435 SVDIITGKRTVLEYMLKPILSAQNNALK 462


>gi|254227426|ref|ZP_04920858.1| Membrane-fusion protein [Vibrio sp. Ex25]
 gi|262396308|ref|YP_003288161.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio sp. Ex25]
 gi|151940038|gb|EDN58864.1| Membrane-fusion protein [Vibrio sp. Ex25]
 gi|262339902|gb|ACY53696.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio sp. Ex25]
          Length = 463

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 75/448 (16%), Positives = 165/448 (36%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  I  I W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPNSARLMLWVMVLFFIAAIGWASWAEIDQVTVGQGKVIPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V+ G  + +G  LL  +D         ++  + NL   +    ++++ +  
Sbjct: 78  EGGLVKEILVKEGQLVEKGQQLLLIDDTRFRSDFREREQQVANLTASVLQLSASINSVAV 137

Query: 123 KYD----------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D          VL+    +    L +   K        +   + ++   L +   +++
Sbjct: 138 NRDFKTENWRQSVVLDYGKLTFPPTLEETQPKLTQRQKAEYREDLDNLRNQLSVIDQQVQ 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + +++E +   LR      +K+L + K L ++  V + +L + +R V  +  E+  
Sbjct: 198 QKQQDLVEIEARVRNLRQSYQYAKKELDITKPLADEGVVPRIELLKLQRQVNDTRREMTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E           +  E    L   Q   +  +     LE    +  +
Sbjct: 258 SELKIPVLKSAIRESMLNRIDVALKFRSEQQEKLNSAQDQLSALVESAVGLEDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ G I      +     Q    +++IVP      + AK+ PK I  ++    A V+F
Sbjct: 318 NSPVTGKIKTLNINTVGGVIQPGMDIVEIVPTEDTLLVEAKIAPKDIAFLRPDLHAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   +    +  +E I    +Q +       +Y V ++     F  D ++ +  G  A
Sbjct: 378 TAYDFTKYGGLEGELEHISADTTQDEE---GNSFYIVRVRTDKTNFGQDADLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 435 SVDIITGKRTVLEYLLKPILSAKTNALK 462


>gi|153801266|ref|ZP_01955852.1| secretion protein, HlyD family [Vibrio cholerae MZO-3]
 gi|124123181|gb|EAY41924.1| secretion protein, HlyD family [Vibrio cholerae MZO-3]
          Length = 481

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 36  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 95

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 96  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 155

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D            +   + ++   L +   +++
Sbjct: 156 DENFEEKNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIK 215

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 216 QKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRRELTS 275

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 276 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 335

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 336 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPELPAIVKF 395

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 396 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDQNLPIIPGMTA 452

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 453 SVDIITGKRTVLDYLLKPIL 472


>gi|258622089|ref|ZP_05717115.1| secretion protein, HlyD family [Vibrio mimicus VM573]
 gi|258585413|gb|EEW10136.1| secretion protein, HlyD family [Vibrio mimicus VM573]
          Length = 463

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 75/440 (17%), Positives = 162/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  ITW+    I+      G+++    V  I++ 
Sbjct: 18  DDKTAALLLNTPHSARIILWVMVAFFILAITWAAWAEIDKVTVGQGKVVPSSQVQVIQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D  EK +           +    L D   +        +   + ++   L +   +++
Sbjct: 138 NEDFEEKNWTNSVRLDYSKLAFPPVLSDTQPELVDRQRDQYRQDLDNLRNQLSVLSQQIK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR   +  +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 198 QKQQDLIEAEARVVNLRQSYNFAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 TELKIPVLKAAVREALLSRINAAQKFRTEQQDKLNQAQDKLSALTESAVGLEDKVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 318 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPELPAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 378 TAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDKNLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 435 SVDIITGKRTVLDYLLKPIL 454


>gi|292901054|ref|YP_003540423.1| type I secretion system protein [Erwinia amylovora ATCC 49946]
 gi|291200902|emb|CBJ48039.1| type I secretion system protein [Erwinia amylovora ATCC 49946]
          Length = 445

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 70/431 (16%), Positives = 163/431 (37%), Gaps = 13/431 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             + ++     +   L   +G+ G + W+   P++  V+S G +    N   +++P SGI
Sbjct: 16  AQIPQDERRYTRMGWLALGVGLFGFLAWAAFAPLDKGVASPGTVTVSGNSKTVQAPASGI 75

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNK 123
           I    V+ G ++  G  L+    ++    +D  +            +  E+  L+ +   
Sbjct: 76  INNIAVKEGDKVKAGAILVQLSQVQAQAQVDSLRDRYYTTLATEGRLLAERDGLNQVTFS 135

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +   + R  +++    +  ++  +     I    +S+     +++ +  +R + + 
Sbjct: 136 PIFAQVKDQPRVVEIIALQTQLFASRRQGLQSEIDGYKQSMDGMRFQLKGLQDSRANKQI 195

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + S LR       + +  MK L     + +N     +R   + +    E       + + 
Sbjct: 196 QLSSLR-------EQMNSMKQLAADGYLPRNRYLDVQRQFAEVSSSSNETAGRIGQLQKQ 248

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           + E     +  FA+Y +E+   L Q Q   ++  +KL + +       I SP+ GT+V  
Sbjct: 249 LQESQQRIDQRFADYQREVRTQLAQTQMDISEFRNKLQMADFDLGNTAITSPVDGTVVGL 308

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             F+          LM +VP      + + +    I  V +G    + F  +   +  K 
Sbjct: 309 NIFTQGGVVGAGDHLMDVVPSQAALVVDSHLKVDLIDKVYQGLPVDLMFTAFNQNKTPKI 368

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTL 422
              +  +     +  +    + YY + + ++    +  +  +++ G P EV     + +L
Sbjct: 369 PGTVTLVSAD--RLVDKTSGEPYYRMQVTVSPEGMAMLSGEDIKPGMPVEVFVKTGSRSL 426

Query: 423 AQEIIHPITDN 433
              +  PI D 
Sbjct: 427 LSYLFKPILDR 437


>gi|84386166|ref|ZP_00989195.1| secretion protein, HlyD family [Vibrio splendidus 12B01]
 gi|84378936|gb|EAP95790.1| secretion protein, HlyD family [Vibrio splendidus 12B01]
          Length = 463

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 173/448 (38%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  I  I WS    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPTSARIMLWVIVLFFIAAIGWSAWAEIDKVTVGQGKVIPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G ++ +G  LL  +D         ++  + NL   +    ++ + +  
Sbjct: 78  EGGLVKEILVREGQRVQKGQQLLLIDDTRFRSDFREREQQVANLTASVLMLSASFNSVVI 137

Query: 123 KYD----------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +          +L+    +   +L +   K  +     +   ++++   L +   ++ 
Sbjct: 138 NEEFSVENWKQSVLLDYGKLAFPPKLYELQPKLVNRQKAEYRQDLNNLRNQLSVFDQQVE 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++++ + LR      +++L + K L ++  V + +L + +R V  +  E+  
Sbjct: 198 QKQQDLVEIKSRVNNLRQSYKFARQELDITKPLADEGVVPRIELLKLQRQVNDTRREMTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E          ++  E    L Q Q   +        LE    +  +
Sbjct: 258 SELKIPLLRSAIKESMLSRIDAALSFRSEQQEKLNQAQDKLSAMTESSVGLEDRVNRTIV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++   TA V+F
Sbjct: 318 VSPVTGTVKTLGINTVGGVIQPGMDIVEIVPTEDSLLVEAKIAPQDIAFLRPELTAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPA 411
             Y   +    + ++E I    +Q +       +Y V ++    +F  N  + +  G  A
Sbjct: 378 SAYDFTKYGGLEGVLEHISADTTQDEE---GNSFYIVRVRTDKYSFGHNEELPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ P+        +
Sbjct: 435 SVDIITGKRTVLEYMLKPLLSAQNNALK 462


>gi|262403121|ref|ZP_06079681.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio sp. RC586]
 gi|262350620|gb|EEY99753.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio sp. RC586]
          Length = 463

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 72/440 (16%), Positives = 161/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +    ++  +  I W+    I+      G+++    V  I++ 
Sbjct: 18  DDKTAALLLNTPHSARIILWAMVLFFVLAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL  ++    +++  +  
Sbjct: 78  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTANVLQLSASISSVII 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D   +        +   + ++   L +   +++
Sbjct: 138 DENFDEKNWTNSVRLDYSKLAFPPVLSDSQPELVERQRDQYRQDLDNLRNQLSVLSQQIK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               +R++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 198 QKQQDRVEAEARVINLRQSYDFAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 TELKIPVLKAAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSAMTESAVGLEDKVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 318 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G   
Sbjct: 378 TAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDKNLPIIPGMTT 434

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 435 SVDIITGKRTVLDYLLKPIL 454


>gi|312174228|emb|CBX82481.1| Type I secretion system, membrane-fusion protein [Erwinia amylovora
           ATCC BAA-2158]
          Length = 443

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 70/431 (16%), Positives = 163/431 (37%), Gaps = 13/431 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             + ++     +   L   +G+ G + W+   P++  V+S G +    N   +++P SGI
Sbjct: 14  AQIPQDERRYTRMGWLALGVGLFGFLAWAAFAPLDKGVASPGTVTVSGNSKTVQAPASGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNK 123
           I    V+ G ++  G  L+    ++    +D  +            +  E+  L+ +   
Sbjct: 74  INNIAVKEGDKVKAGAVLVQLSQVQAQAQVDSLRDRYYTTLATEGRLLAERDGLNQVTFS 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +   + R  +++    +  ++  +     I    +S+     +++ +  +R + + 
Sbjct: 134 PIFAQVKDQPRVVEIIALQTQLFASRRQGLQSEIDGYKQSMDGMRFQLKGLQDSRANKQI 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + S LR       + +  MK L     + +N     +R   + +    E       + + 
Sbjct: 194 QLSSLR-------EQMNSMKQLAADGYLPRNRYLDVQRQFAEVSSSSNETAGRIGQLQKQ 246

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           + E     +  FA+Y +E+   L Q Q   ++  +KL + +       I SP+ GT+V  
Sbjct: 247 LQESQQRIDQRFADYQREVRTQLAQTQMDISEFRNKLQMADFDLGNTAITSPVDGTVVGL 306

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             F+          LM +VP      + + +    I  V +G    + F  +   +  K 
Sbjct: 307 NIFTQGGVVGAGDHLMDVVPSQAALVVDSHLKVDLIDKVYQGLPVDLMFTAFNQNKTPKI 366

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTL 422
              +  +     +  +    + YY + + ++    +  +  +++ G P EV     + +L
Sbjct: 367 PGTVTLVSAD--RLVDKTSGEPYYRMQVTVSPEGMAMLSGEDIKPGMPVEVFVKTGSRSL 424

Query: 423 AQEIIHPITDN 433
              +  PI D 
Sbjct: 425 LSYLFKPILDR 435


>gi|229586576|ref|YP_002845077.1| HlyD family secretion protein [Rickettsia africae ESF-5]
 gi|228021626|gb|ACP53334.1| HlyD family secretion protein [Rickettsia africae ESF-5]
          Length = 511

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 89/442 (20%), Positives = 167/442 (37%), Gaps = 17/442 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+ +   + +     + I  ++    WS L P++    + G ++   N   I+    GII
Sbjct: 75  NVTQAARSPILFGIYVMIFLVLIGGLWSALAPLDSGAIAVGIVMPSTNKKTIQHHEGGII 134

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
               V+ G ++ +G  L+  E+       +      +N       +  E+  L+ +    
Sbjct: 135 NAIYVKQGDKVKEGDKLIELEETRIKSEHENILGQYRNFLATENRLIAERDNLEQIEFSD 194

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +++        +++        +  +V+N    ++++++     ++         LE K
Sbjct: 195 FLMQDINLPEVAKIIHTQENLFRSRKEVYNSEKDALHQNIAQLEKKIE-------GLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  ++ L EK  V +  L  QE  V  S  ++     E   +   I
Sbjct: 248 KVAASKTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAASKSDVATIEAEIAGIRHAI 307

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E   +   +   Y + I  +L + Q   A    K   L  +  +  I SP+ G +   +
Sbjct: 308 TETQIKIINQQNKYTERILTELREAQVQTASLKEKYNALTDSLNRVIIRSPVDGIVNSLK 367

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F 
Sbjct: 368 YHTIGGVISHGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFT 427

Query: 365 AIIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFSD----NNIELRNGFPAEVLFTA 417
             +  I P I Q +     Q+   YY   ++I    F+      N+EL  G  AEV    
Sbjct: 428 GKVVSISPDIVQDERQYPGQQQDNYYVARVEIDMDEFNKVAKVKNLELHPGMQAEVQIVT 487

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
              TL + ++ P+ D   K F 
Sbjct: 488 GTRTLLRYLLDPVIDTAFKAFR 509


>gi|194292655|ref|YP_002008562.1| proteases secretion protein prte [Cupriavidus taiwanensis LMG
           19424]
 gi|193226559|emb|CAQ72510.1| Proteases secretion protein prtE [Cupriavidus taiwanensis LMG
           19424]
          Length = 446

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 72/430 (16%), Positives = 162/430 (37%), Gaps = 14/430 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
                 +    +   G+ G + W+ L P++  V   G ++   N   ++ P  GI++K  
Sbjct: 23  PARRYSRIGWTVIAAGLGGFLLWAALAPLDKGVPVGGTVIVSGNRKVVQHPSGGIVEKIL 82

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLE 128
           V++G ++  G  L+T    +     +  +  +   + +   +  E+  L  ++      E
Sbjct: 83  VKDGDKVKAGQVLVTMNHTQARAQAEATRAQLLTARAVEARLLAERDGLADIDFGEIERE 142

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            A +    +++    +  ++  +     + ++   +    +++  +   R + + + + L
Sbjct: 143 AASDPGVAEVVAVQRQLFASRRQALQKELGTIAEGITGLQSQLGGLRDARQNKQQQLAAL 202

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R       + L  M+ L  +  + +N L   ER+  +   E+  ++         + EL 
Sbjct: 203 R-------EQLQNMRELAREGYMPRNRLLDTERLYAQVNGEISADLGTIGRTQSQLTELR 255

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A+L      KE+   L + QR      S+L  L+       + +P++G++V    F+ 
Sbjct: 256 IRASLRREQEQKEVRTLLGEAQRDVRMLRSRLEGLDFDVANTQVRAPVSGSVVGLAIFTQ 315

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                    LM +VP  +   + A+V    I  V  G    + F  +   R  +  A + 
Sbjct: 316 GGVVAPGARLMDVVPDGEPLEVEARVPVNLIDKVTSGLPVELMFTAFNQSRTPRIPAEVS 375

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEII 427
            +      ++       YY+V  ++T          ++R G P EV       T+   + 
Sbjct: 376 VVSADRLTEEE---GAPYYKVRAQVTPDGMDRLAGHQVRPGMPVEVFIKTGERTMLSYLF 432

Query: 428 HPITDNWPKI 437
            P+ D     
Sbjct: 433 KPVADRARTA 442


>gi|86144773|ref|ZP_01063105.1| secretion protein, HlyD family protein [Vibrio sp. MED222]
 gi|218675794|ref|YP_002394613.1| Secretion protein, HlyD family [Vibrio splendidus LGP32]
 gi|85837672|gb|EAQ55784.1| secretion protein, HlyD family protein [Vibrio sp. MED222]
 gi|218324062|emb|CAV25182.1| Secretion protein, HlyD family [Vibrio splendidus LGP32]
          Length = 463

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 172/448 (38%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  +  I WS    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPTSARIMLWVIVLFFVAAIGWSAWAEIDKVTVGQGKVIPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V+ G ++ +G  LL  +D         ++  + NL  ++    ++L  +  
Sbjct: 78  EGGLVKEILVKEGQRVQKGQQLLLIDDTRFRSDFREREQQVANLTANVLMLSASLTSVVI 137

Query: 123 KYD----------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +          +L+    +      D   K  +     +   ++++   L +   ++ 
Sbjct: 138 NEEFSVKEWKKSVLLDYGKLAFPPLFYDLHPKLVNRQKAEYRQDLNNLKNQLSVFDQQVG 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   LR   +  +++L + K L ++  V + +L + +R V  +  E+  
Sbjct: 198 QKQQDLVEIKARVQNLRQSYNFARQELDITKPLADEGVVPKIELLKLQRQVNDTRREMTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E          N+  E    L Q Q   +        LE    +  +
Sbjct: 258 SELKIPLLRSAIKEAMLSRIDAALNFRSEQQEKLNQAQDKLSAMTESAVGLEDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + AK+ P+ I  ++   +A V+F
Sbjct: 318 VSPVTGTVKTLGINTVGGVIQPGMDIVEIVPTEDSLLVEAKIAPQDIAFLRPELSAVVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF-SDNNIELRNGFPA 411
             Y   +      ++E I    +Q +       +Y V ++    +F ++  + +  G  A
Sbjct: 378 SAYDFTKYGGLVGVLEHISADTTQDEE---GNSFYIVRVRTEKYSFGANEELPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 435 SVDIITGKRTVLEYMLKPILSAQNNALK 462


>gi|292490037|ref|YP_003532931.1| type I secretion system, membrane-fusion protein [Erwinia amylovora
           CFBP1430]
 gi|4826417|emb|CAB42875.1| PrtE protein [Erwinia amylovora]
 gi|291555478|emb|CBA23972.1| Type I secretion system, membrane-fusion protein [Erwinia amylovora
           CFBP1430]
          Length = 443

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 70/431 (16%), Positives = 163/431 (37%), Gaps = 13/431 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             + ++     +   L   +G+ G + W+   P++  V+S G +    N   +++P SGI
Sbjct: 14  AQIPQDERRYTRMGWLALGVGLFGFLAWAAFAPLDKGVASPGTVTVSGNSKTVQAPASGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNK 123
           I    V+ G ++  G  L+    ++    +D  +            +  E+  L+ +   
Sbjct: 74  INNIAVKEGDKVKAGAILVQLSQVQAQAQVDSLRDRYYTTLATEGRLLAERDGLNQVTFS 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +   + R  +++    +  ++  +     I    +S+     +++ +  +R + + 
Sbjct: 134 PIFAQVKDQPRVVEIIALQTQLFASRRQGLQSEIDGYKQSMDGMRFQLKGLQDSRANKQI 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + S LR       + +  MK L     + +N     +R   + +    E       + + 
Sbjct: 194 QLSSLR-------EQMNSMKQLAADGYLPRNRYLDVQRQFAEVSSSSNETAGRIGQLQKQ 246

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           + E     +  FA+Y +E+   L Q Q   ++  +KL + +       I SP+ GT+V  
Sbjct: 247 LQESQQRIDQRFADYQREVRTQLAQTQMDISEFRNKLQMADFDLGNTAITSPVDGTVVGL 306

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             F+          LM +VP      + + +    I  V +G    + F  +   +  K 
Sbjct: 307 NIFTQGGVVGAGDHLMDVVPSQAALVVDSHLKVDLIDKVYQGLPVDLMFTAFNQNKTPKI 366

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTL 422
              +  +     +  +    + YY + + ++    +  +  +++ G P EV     + +L
Sbjct: 367 PGTVTLVSAD--RLVDKTSGEPYYRMQVTVSPEGMAMLSGEDIKPGMPVEVFVKTGSRSL 424

Query: 423 AQEIIHPITDN 433
              +  PI D 
Sbjct: 425 LSYLFKPILDR 435


>gi|229505789|ref|ZP_04395298.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae BX 330286]
 gi|262168909|ref|ZP_06036603.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae RC27]
 gi|229356140|gb|EEO21058.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae BX 330286]
 gi|262022608|gb|EEY41315.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae RC27]
          Length = 463

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 18  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D            +   + ++   L +   +++
Sbjct: 138 DENFEEKNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 198 QKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 318 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 378 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDQNLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 435 SVDIITGKRTVLDYLLKPIL 454


>gi|70732680|ref|YP_262443.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas
           fluorescens Pf-5]
 gi|68346979|gb|AAY94585.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas
           fluorescens Pf-5]
          Length = 449

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 66/429 (15%), Positives = 154/429 (35%), Gaps = 13/429 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L  +     +   LL + G  G I W+ L P++  V+ SG+++   +   ++    GI++
Sbjct: 22  LSLDDRKYSRLGWLLVLGGFAGFIGWAALAPLDKGVAVSGKVMVSGHRKTVQHQSGGIVE 81

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYD 125
           + +V+ G ++  G  LL   +      +   +            ++ E+     +     
Sbjct: 82  RIEVKEGDRVSAGQVLLRLNETPLRTQMQSLRSQYLGSLASEARLNAERDGASDIVFDPQ 141

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +   A E      L    +  S+  +  +     +  ++     ++R    ++     + 
Sbjct: 142 LQALASEPDVAASLSLQRQLFSSRRQALSMEQQGIAETIAGSEAQLRGTRDSQASKLAQR 201

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             L        + L  ++ L     + +N L   ER+  +    + E+      + R I 
Sbjct: 202 RAL-------NEQLQGLRELARDGYIPRNRLLDSERLYAQIDGSIAEDFGRIGQLQRQIL 254

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           EL         ++ K++   L   +    D  ++L   +       + +P AG +V  + 
Sbjct: 255 ELRLRIRQTTEDFQKDLRSQLADTRVRTEDLRNRLASAQFELANSQVRAPAAGVVVGLEV 314

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           ++     +  QPLM IVP  +   + A+V  + +  V  G    + F  +      +   
Sbjct: 315 YTEGGVIKPGQPLMDIVPQDEPLLVEARVPVQLVDKVHPGLPVELMFSAFNQSTTPRVPG 374

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITD-LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
            +  +     +Q +    + YY +   ++         +++R G P E        ++  
Sbjct: 375 EVTLVSAD--RQVDERTEEPYYTLRATVSAQGMQQLQGLQIRPGMPVEAFVRTGERSMLN 432

Query: 425 EIIHPITDN 433
            +  P+ D 
Sbjct: 433 YLFKPLLDR 441


>gi|229514485|ref|ZP_04403946.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae TMA 21]
 gi|229348465|gb|EEO13423.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae TMA 21]
          Length = 463

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 18  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D            +   + ++   L +   +++
Sbjct: 138 DENFEEKNWTNSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 198 QKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 318 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 378 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDQNLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 435 SVDIITGKRTVLDYLLKPIL 454


>gi|209963700|ref|YP_002296615.1| HlyD family secretion protein [Rhodospirillum centenum SW]
 gi|209957166|gb|ACI97802.1| HlyD family secretion protein [Rhodospirillum centenum SW]
          Length = 453

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 72/424 (16%), Positives = 158/424 (37%), Gaps = 13/424 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             LL  I   G+ TW+ + P+  +  ++G +    N   I+    GI+K+ +V+ G  + 
Sbjct: 37  GLLLLGITFGGVGTWAAVAPLSSAAIATGVLTVASNNKMIQHLEGGIVKEIRVKEGDMVA 96

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            G  L+  +       +D+ +  +     L   +  E+S  D +     +++   +    
Sbjct: 97  AGATLVVLDPTRAEAQVDIVRGQLDATLALEARLLAERSGADAVRFPDSLVKNTSDPDVA 156

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            ++D       +  K+F     S+   + +   R+         LE +       ++  +
Sbjct: 157 AIID-------SQKKLFEARRLSLEGQVTILRKRIVQAREQIGGLEAQRDSNDRQITLIE 209

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +L  ++ L+EK    +  +   ER   +   E  +   E   + + I E   +      
Sbjct: 210 DELKGLRELYEKGYAPRTRILALEREASRLLGERGQYGGEVSRVQQVIGETELQIIQVRK 269

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           N+ +E+++ L++ Q    D   +L   E    +  I SP AG +   +  +         
Sbjct: 270 NFQEEVAKQLQETQNQIFDLRERLRAAEDVLARTVITSPEAGKVTGLKVHTVGGVVPPGD 329

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +++IVP +    I A++    + +V  G  A V    ++          +E +     Q
Sbjct: 330 VMLQIVPDNDDLIIEAQLQVTDVDNVHVGQQADVHLTAFSQRITPVVTGTVENVSGDRFQ 389

Query: 377 QDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
                    YY V + +++       +++L  G PA+        T  + +  P+     
Sbjct: 390 DQRT--GLPYYTVRIVVSEEERVKLGDLQLLPGMPADAYIKTGEKTPLRYLFDPLIQVIN 447

Query: 436 KIFE 439
           + F 
Sbjct: 448 RSFR 451


>gi|297579882|ref|ZP_06941809.1| secretion protein [Vibrio cholerae RC385]
 gi|297535528|gb|EFH74362.1| secretion protein [Vibrio cholerae RC385]
 gi|327486038|gb|AEA80444.1| ABC-type protease exporter, membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae LMA3894-4]
          Length = 463

 Score =  348 bits (894), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 18  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D            +   + ++   L +   +++
Sbjct: 138 DENFEEKNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 198 QKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 318 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 378 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDQNLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 435 SVDIITGKRTVLDYLLKPIL 454


>gi|315181671|gb|ADT88584.1| secretion protein, HlyD family [Vibrio furnissii NCTC 11218]
          Length = 463

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 73/446 (16%), Positives = 167/446 (37%), Gaps = 14/446 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P+S + M  + ++  I    W+    I+      G+++    +  +++ 
Sbjct: 18  DDQTAALLLNTPSSARIMLWVMVLFFILAGAWASWAQIDKVTVGQGKVVPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  LL  +D         ++  + NL  ++    +++  +  
Sbjct: 78  EGGLVKQILVREGEQVKKGQQLLLIDDTRFRSDYREREQQVANLTANVLQLSASIASVVV 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  E  +E          +    LL+            +   + ++   L +   +++
Sbjct: 138 NDEFTEAEWEKSVRIDYTKLAFPPALLESQPDLVERQRAQYRQDLDNLRNQLSVISQQVK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   LR   S   K+L + K L ++  V + +L + +R V  +  +L  
Sbjct: 198 QKQQDLVEIQARVRNLRQSYSYANKELEITKPLADEGVVPRIELLKLQRQVNDTRRDLTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   + E           +  +    L Q Q   +        LE    +  +
Sbjct: 258 SELKVPVLKSALRESMLSRIDAALKFRSQQQEALNQTQDKLSAMTESTVGLEDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           LSP+ GTI      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 318 LSPVTGTIKTLYVNTVGGVIQPGMDIVEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   +    +  +E I    SQ ++      +Y V ++  + +   D ++ +  G  A
Sbjct: 378 SAYDFTKYGGLEGTLEHISADTSQDED---GNSFYLVRVRTKETSLGHDESLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKI 437
            V       T+   ++ PI       
Sbjct: 435 SVDIITGKRTVLDYLLKPILSAKNNA 460


>gi|261213109|ref|ZP_05927393.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio sp. RC341]
 gi|260838174|gb|EEX64851.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio sp. RC341]
          Length = 463

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 74/440 (16%), Positives = 161/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  +TW+    I+      G+++    V  I++ 
Sbjct: 18  DDKTAALLLNTPHSARIILWVMVAFFILAVTWASWAEIDKVTVGQGKVVPSSQVQVIQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                EK +           +    L D   +        +   + ++   L +   +++
Sbjct: 138 DESFEEKNWSNSVRLDYSKLAFPPVLSDSQPELVERQRNQYRQDLDNLRNQLSVLSQQIK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E++   LR      +K+L + + L  +  V + +L + +R V  +  EL  
Sbjct: 198 QKQQDLVEAESRVVSLRQGYDFAKKELEITEPLANEGVVPKIELLKLQRQVNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 TELKIPVLNAAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSALTESAVGLEDKVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 318 VSPVTGTVKTLYVNTVGGVIQPGMNIVEIVPTEDTLLVEAQIAPQDIAFLRPELPAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 378 TAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTIGHDKNLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 435 SVDIITGKRTVLDYLLKPIL 454


>gi|51473509|ref|YP_067266.1| alkaline proteinase secretion protein [Rickettsia typhi str.
           Wilmington]
 gi|51459821|gb|AAU03784.1| alkaline proteinase secretion protein [Rickettsia typhi str.
           Wilmington]
          Length = 511

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 81/442 (18%), Positives = 162/442 (36%), Gaps = 17/442 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+ +   + +     + I  ++    WS L P++    + G ++   N   I+    GII
Sbjct: 75  NVAQAARSPILFGIYVIIFLVLIGGLWSALAPLDSGAVAIGIVIPSTNKKTIQHNEGGII 134

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
               V+ G ++ +G  L+  E+       +      +N       +  E+  L+ +    
Sbjct: 135 NAIYVKQGDKVSEGDKLIELEETRIKSEHENILSQYRNFLATENRLIAERDNLEQIAFSD 194

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +++        +++        +  +++     ++ +++     ++         LE K
Sbjct: 195 LLIQNMNLPEVAKIIHTQENLFKSRKEIYLSEKDALNQNIAQLEKKIE-------GLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                   + +Q  L  ++ L EK  + +  L +QE  V  +  ++     E   +   I
Sbjct: 248 KISASKTAAVYQDRLKALRTLKEKGFIQKAALLEQEAKVAAAKSDVATTEAEIAGIRHAI 307

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E   +       Y +    +L + Q   A    K   L     +  I SP+ G +   +
Sbjct: 308 TETQIKIINHQNKYTERTLTELREAQIQTASLKEKYNSLTDLLNRVIIRSPVDGIVNNLK 367

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        QP+M+I P +    I A+++ K I  V +G  A +RF  +       F 
Sbjct: 368 YHTIGGVISHGQPIMEISPINDPLIIEARISQKNIDSVHEGLIAKIRFSAFKSRTTPTFT 427

Query: 365 AIIEKIDPIISQQDN---NLQTQEYYEVILKITDLAFSD----NNIELRNGFPAEVLFTA 417
             +  I P I   +      Q   YY   ++I    F+      N+ L  G  AEV    
Sbjct: 428 GRVVSISPDIVHDERQHPGYQQDNYYVARVEINMEEFNKVAKVKNLALHPGMQAEVQIVT 487

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
              TL + ++ P+TD   K F 
Sbjct: 488 GTRTLLRYLLDPVTDTAFKAFR 509


>gi|270261086|ref|ZP_06189359.1| HlyD family type I secretion membrane fusion protein [Serratia
           odorifera 4Rx13]
 gi|270044570|gb|EFA17661.1| HlyD family type I secretion membrane fusion protein [Serratia
           odorifera 4Rx13]
          Length = 443

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 71/431 (16%), Positives = 163/431 (37%), Gaps = 13/431 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + + ++     +   L+  IG+ G + W+   P++  V++ G +    N   +++P SGI
Sbjct: 14  EQIPQDERRFTRMGWLVVGIGLFGFLAWAAFAPLDKGVAAPGSVTVSGNRKTVQAPASGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNK 123
           I    V+ G ++  G  L+    ++    +   +            +  E+  L  +   
Sbjct: 74  ITNIAVKEGDKVKAGEVLVQLSQVQALAQVASLRDQYYTTLASEGRLLAERDGLTKVTFS 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +   + R  +++    +  S+        I    +S+     +++ +  +R++ + 
Sbjct: 134 PVFEQIKDQPRVAEIIALQTQLFSSRRLGLQSEIDGYKQSMDGMRFQLKGLQDSRVNKQI 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + S LR       + +  MK L     + +N   + +R   +    + E +     + + 
Sbjct: 194 QLSSLR-------EQMNSMKQLAADGYLPRNRYLEVQRQFAEVNSSIDETVGRIGQVQKQ 246

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           + E     +  FA+Y +E+   L Q Q   ++  +KL +         I S + GT+V  
Sbjct: 247 LQESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLEMANFDLGNTAITSSVDGTVVGL 306

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             F+          LM +VP      + +++  + +  V  G    + F  +   +  K 
Sbjct: 307 SIFTQGGVVGAGDHLMDVVPSQATLVVDSRLKVELVDKVYNGLPVDLMFTAFNQNKTPKI 366

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTL 422
              +  I         N   + YY++ + +T       +  +++ G P EV     + +L
Sbjct: 367 PGTVTLISADRLVDKAN--GEPYYQMQVTVTPEGMKMLSGEDIKPGMPVEVFVKTGSRSL 424

Query: 423 AQEIIHPITDN 433
              +  PI D 
Sbjct: 425 LSYLFKPILDR 435


>gi|229510356|ref|ZP_04399836.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae B33]
 gi|229517512|ref|ZP_04406957.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae RC9]
 gi|229605322|ref|YP_002876026.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae MJ-1236]
 gi|255746192|ref|ZP_05420139.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholera CIRS 101]
 gi|262158681|ref|ZP_06029795.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae INDRE 91/1]
 gi|229345548|gb|EEO10521.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae RC9]
 gi|229352801|gb|EEO17741.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae B33]
 gi|229371808|gb|ACQ62230.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae MJ-1236]
 gi|255735946|gb|EET91344.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholera CIRS 101]
 gi|262029561|gb|EEY48211.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae INDRE 91/1]
          Length = 463

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 18  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLVKQILVREGEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVII 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D            +   + ++   L +   +++
Sbjct: 138 DENFEEKNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 198 QKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 318 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 378 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDQNLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 435 SVDIITGKRTVLDYLLKPIL 454


>gi|88607344|ref|YP_505600.1| HlyD family type I secretion membrane fusion protein [Anaplasma
           phagocytophilum HZ]
 gi|88598407|gb|ABD43877.1| type I secretion membrane fusion protein, HlyD family [Anaplasma
           phagocytophilum HZ]
          Length = 509

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 80/441 (18%), Positives = 172/441 (39%), Gaps = 31/441 (7%)

Query: 20  MTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           + ++++IG  G    W+ L P++ +V + GE+++  N   ++    GI+KK  V  G  +
Sbjct: 77  IGIVAVIGFFGCFGIWAALAPLDGAVIAPGEVVSSLNRQIVQHLEGGIVKKILVTEGETV 136

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            +  PL+          + + K  +  L      ++  KS    +    ++ + + E   
Sbjct: 137 EKEQPLVYLNSTAAQANLGIIKEKLLVLLATEARLNAIKSHATTVEFPDEIFKLSSE--- 193

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
               D + K      ++F    +S+   +++   R++ ++     L ++           
Sbjct: 194 ----DVVSKVLENQKELFFSQNNSITGQIQILRQRIKQLHQELAGLASQLEAEEKQYHLI 249

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            ++L   K+L +   +S+  L   ER+   +  +L        +  + I E   E     
Sbjct: 250 DEELETKKSLLDAGYISKPYLLNLERLHANAEGKLGHIRATIASTEQKIGENRLEIINIT 309

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              +   + +L++   T  D   +L   E   E+  I SP  G +   +  +        
Sbjct: 310 NTVMDRANAELKETASTITDLRERLRAAEDVLERTVIRSPQHGIVTGLKYHTEGGVIPPG 369

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPHYADIRE 360
             +M++VP      I AK++ + I+ +                +G  A VR   +   + 
Sbjct: 370 GVIMEVVPIDDDFIIDAKISIRNIEEILSAQTVEENLVTSGEYRGLKAKVRLSAFNIRKF 429

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAK 418
                I+ ++         +     YY + + I   + S    N++L +G PAEV    +
Sbjct: 430 GLVNGIVTQVSADA---LADPHGMRYYSLRVVIPKSSHSGKFKNLKLYHGMPAEVFVVTR 486

Query: 419 NTTLAQEIIHPITDNWPKIFE 439
           + TL + ++ PIT  + K F+
Sbjct: 487 SRTLLEYLLTPITSTFEKAFK 507


>gi|83582770|ref|YP_425076.1| Type I secretion membrane fusion protein, HlyD [Rhodospirillum
           rubrum ATCC 11170]
 gi|83578086|gb|ABC24636.1| Type I secretion membrane fusion protein, HlyD [Rhodospirillum
           rubrum ATCC 11170]
          Length = 492

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 70/425 (16%), Positives = 163/425 (38%), Gaps = 12/425 (2%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           +++   L+ ++   GL  W+   P+  +V + G I+ E N   ++    GIIK+  V+ G
Sbjct: 71  TIRAGWLIILVAFGGLGLWAATAPLSSAVGAPGTIVVESNRKTVQHLEGGIIKEILVKEG 130

Query: 76  SQILQGTPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            ++ QG PL+  E  +      ++  +  + + L   +  E+     +    D++  A  
Sbjct: 131 DRVHQGDPLIRLETTQALASAAVVSNQFETYQALEARLVAERDEQKTITFPPDLIAVA-- 188

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
               +L     +      + F+    S+   + +   R+         L+ +    +  L
Sbjct: 189 ----KLKPETAEILQAQQQQFDERHKSIEGQVAILQKRIAQSRQEIEGLKVQRQSKKRQL 244

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              Q ++  ++ L  K    +  +   ER + +   E+  +        + + E   +  
Sbjct: 245 EIFQDEIVGLRELLAKGYTPRTRILAMEREMTRLEGEVGTDTSSMARAEQAVGEAELQII 304

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                + +++   L + Q   ++   + T+      +  +L+  AG I      +     
Sbjct: 305 QTRQQFREDVVGQLREVQTKLSELRERGTVATDVLSRTVLLASQAGVIQNLAVHTLGGII 364

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +  + LM+IVP      I A+++P+ I +V  G    VRF  +          ++ ++  
Sbjct: 365 KPGETLMEIVPEDDRLVIEAQISPRDIDNVVPGMDTEVRFSAFNSRTIPIIDGVLSQVSA 424

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
                + +     YY+  ++++D   +    + LR G P +V+      T+    + P+ 
Sbjct: 425 DRFVNERDSS--SYYKARIEVSDEELAKLGGLALRAGMPVDVMIKTGERTVLHYFLKPLE 482

Query: 432 DNWPK 436
           D    
Sbjct: 483 DALFH 487


>gi|91223017|ref|ZP_01258283.1| secretion protein, HlyD family [Vibrio alginolyticus 12G01]
 gi|269965026|ref|ZP_06179191.1| secretion protein, HlyD family [Vibrio alginolyticus 40B]
 gi|91191830|gb|EAS78093.1| secretion protein, HlyD family [Vibrio alginolyticus 12G01]
 gi|269830329|gb|EEZ84554.1| secretion protein, HlyD family [Vibrio alginolyticus 40B]
          Length = 463

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 165/448 (36%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  I  I W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPNSARFMLWVMVLFFIAAIGWASWAEIDKVTVGQGKVIPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V+ G  + +G  LL  +D         ++  + NL   +    ++++ +  
Sbjct: 78  EGGLVKEILVKEGQLVEKGQQLLLIDDTRFRSDFREREQQVANLTASVLQLSASINSVAV 137

Query: 123 KYD----------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D          +L+    +    L +   +        +   + ++   L +   +++
Sbjct: 138 NRDFETENWRQSVLLDYGKLTFPPTLEETRPQLTQRQKAEYREDLDNLRNQLSVIDQQVQ 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   LR      +K+L + K L ++  V + +L + +R V  +  E+  
Sbjct: 198 QKQQDLVEIQARVRNLRQSYQYAKKELDITKPLADEGVVPRIELLKLQRQVNDTRREMTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E           +  E    L   Q   +  +     LE    +  +
Sbjct: 258 SELKIPVLQSAIRESMLNRIDVALKFRSEQQEKLNSAQDQLSALVESAVGLEDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ G I      +     Q    +++IVP      + AK+ PK I  ++    A V+F
Sbjct: 318 NSPVTGKIKTLNINTVGGVIQPGMDIVEIVPTEDTLLVEAKIAPKDIAFLRPDLHAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   +    +  +E I    +Q +       +Y V ++     F  D ++ +  G  A
Sbjct: 378 TAYDFTKYGGLEGELEHISADTTQDEE---GNSFYIVRVRTEKTNFGQDADLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 435 SVDIITGKRTVLEYLLKPILSAKTNALK 462


>gi|229528036|ref|ZP_04417427.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae 12129(1)]
 gi|229334398|gb|EEN99883.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae 12129(1)]
          Length = 463

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 18  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D            +   + ++   L +   +++
Sbjct: 138 DENFEEKNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 198 QKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 318 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIVPQDIAFLRPDLPAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 378 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDQNLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 435 SVDIITGKRTVLDYLLKPIL 454


>gi|157827348|ref|YP_001496412.1| alkaline protease secretion protein AprE [Rickettsia bellii OSU
           85-389]
 gi|157802652|gb|ABV79375.1| Alkaline protease secretion protein AprE [Rickettsia bellii OSU
           85-389]
          Length = 510

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 88/441 (19%), Positives = 161/441 (36%), Gaps = 16/441 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+ +   + +     + I  ++    W  + P++    + G ++   N   I+    GII
Sbjct: 75  NVAQAARSPILFGIYVIIFLVLIGGVWMAVAPLDSGAVAVGILMPSTNKKTIQHHEGGII 134

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
               V+ G ++  G  L+  E+       +      +        +  E+  L+ +    
Sbjct: 135 NAIYVKQGDKVKAGDKLIELEETRIKSEHESTLSQYRTALATENRLIAERDNLEQIEFSD 194

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +++        +++        +  +VFN    ++ + +     R+         LE K
Sbjct: 195 FLMQDINLPEVAKIIHTQENLFRSRKEVFNSEKDALQQRISQLEKRVE-------GLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  +K L EK  V +  L +QE  V  +  ++     E       I
Sbjct: 248 KVAATKTAEVYQDRLKALKTLKEKGFVQKAALLEQEAKVASAKSDVATTDTEIAGTHHSI 307

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E       +   Y +    +L + Q   A    K   L  +  +  I SP+ G I   +
Sbjct: 308 TEAQISIITQQNKYTERTLTELREAQVQAASLREKYNSLTDSLNRIVIKSPVDGIINNLK 367

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +   Y    QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F 
Sbjct: 368 YHTIGGYIGHGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFT 427

Query: 365 AIIEKIDPIISQQDNNLQTQE--YYEVILKITDLAFSD----NNIELRNGFPAEVLFTAK 418
             +  + P I Q +     Q+  YY   ++I    F+      N+EL  G  AEV     
Sbjct: 428 GKVVSVSPDIVQDERQHPGQQDNYYVARVEIDMDEFNRIAKIKNLELHPGMQAEVQIVTG 487

Query: 419 NTTLAQEIIHPITDNWPKIFE 439
             TL + ++ P+ D   K F 
Sbjct: 488 TRTLLRYLLDPVIDTAFKAFR 508


>gi|330830103|ref|YP_004393055.1| secretion protein, HlyD family [Aeromonas veronii B565]
 gi|328805239|gb|AEB50438.1| Secretion protein, HlyD family [Aeromonas veronii B565]
          Length = 472

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 71/437 (16%), Positives = 158/437 (36%), Gaps = 14/437 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P   + +     +  +  I W+    ++      G+++    +  I++   GI+K+  
Sbjct: 35  TTPTGARILLWCCFLFFMSAIVWAAWAELDEVTVGQGKVIPSRQLQVIQNLEGGIVKEIF 94

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLE 128
           V+ G  + +G PLL  +D         ++  +  L+     +  E ++++  N+      
Sbjct: 95  VKEGDIVEKGQPLLRIDDTRFRSDFREREQEVVTLKGDVARLRAEMASVEVKNDPALGWR 154

Query: 129 KAFESREEQLL------DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +     E  +           +Y      V    ++++   L +   ++       ++L 
Sbjct: 155 EQVVVGEAPIQFPDGYETVFAEYAHRERSVQRDRLNNLKNQLYILGQQIEQKEQELIELN 214

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            K   +   +   +++L + + L ++  V Q +L + ER V +   EL  N      +  
Sbjct: 215 AKIRTVNRSVDLARQELNISRPLAKEGIVPQVELIKLERQVNEMQGELESNRLLIPKLNS 274

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + E   + N     +  +   +L + Q            L    ++ ++++P+ GTI  
Sbjct: 275 VLRETISKRNDIALKFRADSQTELNEKQGRLGQLSEGQVGLRDRVDRTSVIAPLKGTIKK 334

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +     Q    LM+IVP      + AKV+PK I  ++ G  A V+   Y       
Sbjct: 335 LKINTLGGVVQPGMDLMEIVPLEDTLLVEAKVSPKDIAFLRPGLDAIVKITAYDFTIYGG 394

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNT 420
               +E+I     Q +       +Y V ++       D  N + +  G  A         
Sbjct: 395 LHGKVEQISADSIQDEE---GNSFYLVRVRTEKSYLGDELNALPIIPGMLASADIITGKK 451

Query: 421 TLAQEIIHPITDNWPKI 437
           ++   ++ PI       
Sbjct: 452 SVLDYLLKPILRAKQSA 468


>gi|308094929|ref|ZP_05892779.2| secretion protein, HlyD family [Vibrio parahaemolyticus AN-5034]
 gi|308095060|ref|ZP_05903288.2| secretion protein, HlyD family [Vibrio parahaemolyticus Peru-466]
 gi|308125571|ref|ZP_05776008.2| secretion protein, HlyD family [Vibrio parahaemolyticus K5030]
 gi|308089394|gb|EFO39089.1| secretion protein, HlyD family [Vibrio parahaemolyticus Peru-466]
 gi|308092284|gb|EFO41979.1| secretion protein, HlyD family [Vibrio parahaemolyticus AN-5034]
 gi|308112386|gb|EFO49926.1| secretion protein, HlyD family [Vibrio parahaemolyticus K5030]
          Length = 464

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 165/448 (36%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  +  I W+    I+      G+++    +  +++ 
Sbjct: 19  DDKTAALLLNTPNSARLMLWVMVLFFVAAIGWASWAQIDQVTVGQGKVIPSSQIQVVQNL 78

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V+ G  + +G  LL  +D         ++  + NL   +    ++++ +  
Sbjct: 79  EGGLVKEILVKEGQLVKKGQQLLLIDDTRFRSDYREREQQVANLTASVLQLSASINSVAV 138

Query: 123 KYD----------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D          VL+    +    L +   +        +   + ++   L +   ++ 
Sbjct: 139 NRDFNIQDWEKSVVLDYGKLTFPPVLEETQPQLTQRQKAEYREDLDNLRNQLSVIDQQVE 198

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + +++E +   LR      +K+L + + L ++  V + +L + +R V  +  E+  
Sbjct: 199 QKQQDLVEIEARVRNLRQSYQYAKKELDITQPLADEGVVPRIELLKLQRQVNDTRREMTS 258

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E           +  E    L   Q   +  +     LE    +  +
Sbjct: 259 SELKIPVIKSAIKESMLNRIDVALKFRSEQQEKLNNAQDQLSALVESAVGLEDRVNRTVV 318

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ G I      +     Q    +++IVP      + AK+ PK I  ++    A V+F
Sbjct: 319 VSPVTGKIKTLNVNTVGGVIQPGMDIVEIVPTEDTLLVEAKIAPKDIAFLRPNLNAIVKF 378

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   +       +E I    +Q +       +Y V ++    +F  D ++ +  G  A
Sbjct: 379 TAYDFTKYGGLVGELEHISADTTQDEE---GNSFYIVRVRTEKTSFGQDADLPIIPGMTA 435

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 436 SVDIITGKRTVLEYLLKPILSAKTNALK 463


>gi|229526379|ref|ZP_04415783.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae bv. albensis VL426]
 gi|229336537|gb|EEO01555.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae bv. albensis VL426]
          Length = 463

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 18  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSPQVQVIQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVANLTASVLQLSASISSVII 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  EK +           +    L D            +   + ++   L +   +++
Sbjct: 138 DENFEEKNWTNSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 198 QKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 318 VSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  +     D N+ +  G  A
Sbjct: 378 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKETTLGHDQNLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 435 SVDIITGKRTVLDYLLKPIL 454


>gi|28901588|ref|NP_801243.1| HlyD family secretion protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153838203|ref|ZP_01990870.1| secretion protein, HlyD family [Vibrio parahaemolyticus AQ3810]
 gi|260900141|ref|ZP_05908536.1| secretion protein, HlyD family [Vibrio parahaemolyticus AQ4037]
 gi|28810135|dbj|BAC63076.1| secretion protein, HlyD family [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748403|gb|EDM59262.1| secretion protein, HlyD family [Vibrio parahaemolyticus AQ3810]
 gi|308110044|gb|EFO47584.1| secretion protein, HlyD family [Vibrio parahaemolyticus AQ4037]
 gi|328469516|gb|EGF40462.1| HlyD family secretion protein [Vibrio parahaemolyticus 10329]
          Length = 463

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 165/448 (36%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  +  I W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPNSARLMLWVMVLFFVAAIGWASWAQIDQVTVGQGKVIPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V+ G  + +G  LL  +D         ++  + NL   +    ++++ +  
Sbjct: 78  EGGLVKEILVKEGQLVKKGQQLLLIDDTRFRSDYREREQQVANLTASVLQLSASINSVAV 137

Query: 123 KYD----------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             D          VL+    +    L +   +        +   + ++   L +   ++ 
Sbjct: 138 NRDFNIQDWEKSVVLDYGKLTFPPVLEETQPQLTQRQKAEYREDLDNLRNQLSVIDQQVE 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + +++E +   LR      +K+L + + L ++  V + +L + +R V  +  E+  
Sbjct: 198 QKQQDLVEIEARVRNLRQSYQYAKKELDITQPLADEGVVPRIELLKLQRQVNDTRREMTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E           +  E    L   Q   +  +     LE    +  +
Sbjct: 258 SELKIPVIKSAIKESMLNRIDVALKFRSEQQEKLNNAQDQLSALVESAVGLEDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ G I      +     Q    +++IVP      + AK+ PK I  ++    A V+F
Sbjct: 318 VSPVTGKIKTLNVNTVGGVIQPGMDIVEIVPTEDTLLVEAKIAPKDIAFLRPNLNAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   +       +E I    +Q +       +Y V ++    +F  D ++ +  G  A
Sbjct: 378 TAYDFTKYGGLVGELEHISADTTQDEE---GNSFYIVRVRTEKTSFGQDADLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 435 SVDIITGKRTVLEYLLKPILSAKTNALK 462


>gi|91205637|ref|YP_537992.1| alkaline protease secretion protein AprE [Rickettsia bellii
           RML369-C]
 gi|91069181|gb|ABE04903.1| Alkaline protease secretion protein AprE [Rickettsia bellii
           RML369-C]
          Length = 510

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 88/441 (19%), Positives = 161/441 (36%), Gaps = 16/441 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+ +   + +     + I  ++    W  + P++    + G ++   N   I+    GII
Sbjct: 75  NVAQAARSPILFGIYVIIFLVLIGGVWMAVAPLDSGAVAVGILMPSTNKKTIQHHEGGII 134

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
               V+ G ++  G  L+  E+       +      +        +  E+  L+ +    
Sbjct: 135 NAIYVKQGDKVKAGDKLIELEETRIKSEHESTLSQYRTALATENRLIAERDNLEQIEFSD 194

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +++        +++        +  +VFN    ++ + +     R+         LE K
Sbjct: 195 FLMQDINLPEVAKIIHTQENLFRSRKEVFNSEKDALQQRISQLEKRVE-------GLEAK 247

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +Q  L  +K L EK  V +  L +QE  V  +  ++     E       I
Sbjct: 248 KVAATKTAEVYQDRLKALKTLKEKGFVQKAALLEQEAKVASAKSDVATTDTEIAGTHHSI 307

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E       +   Y +    +L + Q   A    K   L  +  +  I SP+ G I   +
Sbjct: 308 TEAQISIITQQNKYTERTLTELREAQVQAASLREKYNSLTDSLNRIIIKSPVDGIINNLK 367

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +   Y    QP+M+I P +    I AKV+ K I  V +G  A +RF  +       F 
Sbjct: 368 YHTIGGYIGHGQPIMEISPTNDPLIIEAKVSQKNIDSVHEGLVAKIRFSAFKSRTTPTFT 427

Query: 365 AIIEKIDPIISQQDNNLQTQE--YYEVILKITDLAFSD----NNIELRNGFPAEVLFTAK 418
             +  + P I Q +     Q+  YY   ++I    F+      N+EL  G  AEV     
Sbjct: 428 GKVVSVSPDIVQDERQHPGQQDNYYVARVEIDMDEFNRIAKIKNLELHPGMQAEVQIVTG 487

Query: 419 NTTLAQEIIHPITDNWPKIFE 439
             TL + ++ P+ D   K F 
Sbjct: 488 TRTLLRYLLDPVIDTAFKAFR 508


>gi|257094397|ref|YP_003168038.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046921|gb|ACV36109.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 462

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 72/430 (16%), Positives = 162/430 (37%), Gaps = 12/430 (2%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           NH  + +   L+   G  G + W+ L P++  V + G+++   N   +++   G+++   
Sbjct: 37  NHRRASRLGWLVVAFGFGGFLLWAGLAPLDQGVPTGGQVVVTGNRKAVQNLAPGMVQAIL 96

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLE 128
           V++G ++  G  LL  +        ++ +     +K     +  +      +    D+L 
Sbjct: 97  VKDGDEVRGGDVLLRLDPTMARSQYEVARSQWLVVKAAEARLLADVEGRSEIVFPEDLLR 156

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           ++ + R    +    +   +        ++++  +L    + ++ +   R   E ++ LL
Sbjct: 157 ESDDPRAASAMSVQTQLLRSRRAGLQAELAAMKNTLAGLQSSVKGLEATRRAKEEQTKLL 216

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                    +L  ++ L  +  + +N L++QER++ + +  + E++       + I E+ 
Sbjct: 217 -------LDELKGLRELAAEGYLPRNRLSEQERLLAQLSGAISEDLGNLGRTQQTIGEIR 269

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y KE+   L + Q+      S+L  L        + +P  G IV     + 
Sbjct: 270 MRMLARQQEYDKEVENGLAEAQKEATSLDSRLKGLAFELANTEVRAPSEGVIVGLSVHTV 329

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                   PLM++VP ++   +  +V    I  V+ G    + FP +      +      
Sbjct: 330 GGVLAAGTPLMEVVPKNEPLRVDVQVPTTLIDKVRPGLPVEISFPAFNQRTTPQIAGEFV 389

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEII 427
           ++    +          YY   + +T          E++ G PAEV       T+   I 
Sbjct: 390 QVAADATTDPQGRIP-PYYRGQVVVTADGMKKLKAHEIKPGMPAEVFIKTGERTMLNYIF 448

Query: 428 HPITDNWPKI 437
            P+ D     
Sbjct: 449 KPLGDRMRSA 458


>gi|269959056|ref|YP_003328845.1| putative secretion protein [Anaplasma centrale str. Israel]
 gi|269848887|gb|ACZ49531.1| putative secretion protein [Anaplasma centrale str. Israel]
          Length = 512

 Score =  346 bits (887), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 79/449 (17%), Positives = 162/449 (36%), Gaps = 30/449 (6%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R     L    ++ I        W+   P++ +V + GE+++  N   ++    GII + 
Sbjct: 72  RASWGPLLVGLVVVIAFFGFFGIWAATAPLDGAVIAPGEVVSSLNRQVVQHLEGGIIHQI 131

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVL 127
            V++G  + +G PL+   D      + + K     +      +   K+    ++    + 
Sbjct: 132 LVQDGDAVSKGQPLVLLNDTAAKANLGIIKEKMLILLATEARLLATKNRSGNIDFPPGIH 191

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           + +         D + K      ++F     S+   LK+   R++ +      L  +   
Sbjct: 192 DLSN-------ADVVDKVLGNQRELFYSQRKSISGQLKILEQRIKQLNQELSGLAAQLES 244

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                    ++L   K+L ++  +S+  +   ER    +  +L     +  +  + I E 
Sbjct: 245 EEKQYKLISEELETKKSLLKEGYISKPYILNLERAHADAEGKLGHIRAKIASAEQKIGEN 304

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E        L   + +L++      D   +L   E   ++  I SP  G +   +  +
Sbjct: 305 QLEMIHITNTLLDRTNSELKETDAAVTDLRERLMAAEDVLKRTVIRSPQNGIVTGLRYHT 364

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRF 352
                     ++++VP      I AK+  + I+ V                 G  A VR 
Sbjct: 365 EGGVIPPGGAILEVVPADDDLIIDAKMPTRNIEEVLSAMAVEENLITSGEHGGLRAKVRL 424

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFP 410
             Y   +      I+ ++              +YY + + I   A S    N++L +G P
Sbjct: 425 SAYNIRKFGLIDGIVTQVSADALTD---PSGAKYYSLRVVIPKSAHSGKFKNLKLYHGMP 481

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           AEV    ++ TL   ++ PIT  + K F+
Sbjct: 482 AEVFVVTRSRTLLNYLLTPITSTFEKAFK 510


>gi|260769132|ref|ZP_05878065.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio furnissii CIP 102972]
 gi|260614470|gb|EEX39656.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio furnissii CIP 102972]
          Length = 463

 Score =  345 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 72/446 (16%), Positives = 165/446 (36%), Gaps = 14/446 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P+S + M  + ++  I    W+    I+      G+++    +  +++ 
Sbjct: 18  DDQTAALLLNTPSSARIMLWVMVLFFILAGAWASWAQIDKVTVGQGKVVPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  LL  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLVKQILVREGEQVKKGQQLLLIDDTRFRSDYREREQQVANLTASVLQLSASIASVVV 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +  E  +E          +    L++            +   + ++   L +   +++
Sbjct: 138 NDEFTEAEWEKSVRIDYTKLAFPPALVESQPDLVERQRAQYRQDLDNLRNQLSVISQQVK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   LR   S   K+L + K L ++  V + +L + +R V  +  +L  
Sbjct: 198 QKQQDLVEIQARVRNLRQSYSYANKELEITKPLADEGVVPRIELLKLQRQVNDTRRDLTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   + E           +  +    L Q Q   +        LE    +  +
Sbjct: 258 SELKVPVLKSALRESMLSRIDAALKFRSQQQEALNQTQDKLSAMTESTVGLEDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           LSP+ GTI      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 318 LSPVTGTIKTLYVNTVGGVIQPGMDIVEIVPTEDTLLVEAQIAPQDIAFLRPDLPAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   +    +  +E I    SQ ++      +Y V  +  + +   D ++ +  G  A
Sbjct: 378 SAYDFTKYGGLEGTLEHISADTSQDED---GNSFYLVRARTKETSLGHDESLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKI 437
            V       T+   ++ PI       
Sbjct: 435 SVDIITGKRTVLDYLLKPILSAKNNA 460


>gi|117618439|ref|YP_857208.1| HlyD family secretion protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559846|gb|ABK36794.1| secretion protein, HlyD family [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 472

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 72/437 (16%), Positives = 164/437 (37%), Gaps = 14/437 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P   + +     +  +  I W+    ++      G+++    +  I++   GI+K+  
Sbjct: 35  STPTRARALLWACFLFFMSAIVWAAWAELDEVTVGQGKVIPSRQLQVIQNLEGGIVKEIF 94

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN---------N 122
           V+ G  + +G PLL  +D         ++  +  L+  I   +S +  +           
Sbjct: 95  VKEGDIVEKGQPLLRIDDTRFRSDFREREQELVTLKGDIARLRSEIQSVVVKTGPNLGWR 154

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V++K      +   +   +Y +    V +  ++++   L +   ++       ++L 
Sbjct: 155 EQVVVDKQPIDFPDGFENVFAEYAAREKSVQDERLNNLNNQLYILGQQIEQKEQETIELN 214

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            K   +   +   +++L + + L ++  V Q +L + ER V +   EL  N      +  
Sbjct: 215 AKIRTVARSVDLARQELNISRPLAKEGIVPQVELIKLERQVNEMQGELESNRLLIPKLDS 274

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + E   + N     +  +   +L + Q   +        L    ++ ++++P+ GTI  
Sbjct: 275 VLRETISKRNDIALKFRADSQTELNERQGKLSQLSEGQVGLRDRVDRTSVIAPLKGTIKK 334

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +     Q    LM+IVP      + AKV+PK I  ++ G  A V+   Y       
Sbjct: 335 LKINTLGGVVQPGMDLMEIVPLEDTLLVEAKVSPKDIAFLRPGLEAVVKITAYDFTIYGG 394

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNT 420
               +E+I     Q ++      +Y V ++       D  N + +  G  A         
Sbjct: 395 LHGKVEQISADSIQDED---GNSFYLVRVRTEKSYLGDELNALPIIPGMLASADIITGKK 451

Query: 421 TLAQEIIHPITDNWPKI 437
           ++   ++ PI       
Sbjct: 452 SVLDYLLKPILRAKQSA 468


>gi|56416529|ref|YP_153603.1| alkaline protease secretion protein [Anaplasma marginale str. St.
           Maries]
 gi|222474897|ref|YP_002563312.1| alkaline protease secretion protein (aprE) [Anaplasma marginale
           str. Florida]
 gi|254994749|ref|ZP_05276939.1| alkaline protease secretion protein (aprE) [Anaplasma marginale
           str. Mississippi]
 gi|255002869|ref|ZP_05277833.1| alkaline protease secretion protein (aprE) [Anaplasma marginale
           str. Puerto Rico]
 gi|255004001|ref|ZP_05278802.1| alkaline protease secretion protein (aprE) [Anaplasma marginale
           str. Virginia]
 gi|56387761|gb|AAV86348.1| alkaline protease secretion protein [Anaplasma marginale str. St.
           Maries]
 gi|222419033|gb|ACM49056.1| alkaline protease secretion protein (aprE) [Anaplasma marginale
           str. Florida]
          Length = 512

 Score =  345 bits (884), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 80/442 (18%), Positives = 166/442 (37%), Gaps = 31/442 (7%)

Query: 19  RMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            + L+ +I   G    W+   P++ +V + GE+++  N   ++    GII +  V++G  
Sbjct: 79  LVGLVVVIAFFGFFGIWAATAPLDGAVIAPGEVVSSLNRQVVQHLEGGIIHQILVQDGDA 138

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           + +G PL+   D      + + K     +      +   K+    ++    + + +    
Sbjct: 139 VSKGQPLVLLNDTAAKANLGIIKEKMLVLLATEARLLAIKNRSGSIDFPAGIHDLSS--- 195

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                D + K      ++F     SV   L +   R++ ++     L  +          
Sbjct: 196 ----ADVVDKVLGNQRELFYSQRKSVSGQLSILEQRIKQLHQELSGLAAQLESEEKQYKL 251

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++L   K+L E+  +S+  +   ER    +  +L     +  +  + I E   E    
Sbjct: 252 ISEELEAKKSLLEEGYISKPYILNLERTQADAEGKLGHIRAKIASAEQKIGENQLEMIHI 311

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
               L   + +L++   +  D   +L   E   ++  I SP  G +   +  +       
Sbjct: 312 TNTLLDRTNSELKETNASVTDLRERLMAAEDVLKRTVIRSPQNGIVTGLRYHTEGGVIPP 371

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPHYADIR 359
              ++++VP      I AK+  + I+ V                 G  A VR   Y   +
Sbjct: 372 GGAILEVVPADDDLIIDAKIPTRNIEEVLSARAVEENLVTSGEHSGLRAKVRLSAYNIRK 431

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTA 417
                 I+ ++        + ++   YY + + I   A S    N++L +G PAEV    
Sbjct: 432 FGLIDGIVTQVSADALTDSSGVK---YYSLRVVIPKSAHSGKFKNLKLYHGMPAEVFVVT 488

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
           ++ TL   ++ PIT  + K F+
Sbjct: 489 RSRTLLNYLLTPITSTFEKAFK 510


>gi|104783706|ref|YP_610204.1| heme acquisition transporter, membrane fusion protein HasE
           [Pseudomonas entomophila L48]
 gi|95112693|emb|CAK17421.1| heme acquisition transporter, membrane fusion protein HasE
           [Pseudomonas entomophila L48]
          Length = 446

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 75/434 (17%), Positives = 166/434 (38%), Gaps = 13/434 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            L+ +     +    L ++G+ G + W  L P++  V  SG ++   +   ++ P  G+I
Sbjct: 18  PLRDDARGPARAGRWLVLVGLGGFLLWGALAPLDKGVPVSGNVVVAGSRQAVQHPTGGVI 77

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
           ++  V +G Q+L G  LL  +  +         V   N R     +  E+     +    
Sbjct: 78  EQLLVRDGDQVLTGQVLLRLDATQAQAQQGSLHVQYVNARAGEARLLAERDGSAVIEFPT 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + E+A        L+   +   +  +     ++ +  S+      ++        L+  
Sbjct: 138 ALREQAATPWVAAALEAQRQLFGSRRQALETELAGLGESIAGAQASLQ-------GLQGT 190

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +A   +  + L  ++ L     + +N L   ER++ +    + E++       R +
Sbjct: 191 LASKQAQRDALDEQLKGLRELASDGYIPRNRLLDSERLLAQVNGSIAEDLGAIGRTQRQV 250

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            EL   A      +  ++ + L + Q +  D  ++L   E       + +P +GT+V   
Sbjct: 251 QELKLRAVQRRQEFQNDVRQQLSERQASAEDLGNRLRGAEFELAHTQVRAPASGTVVGLS 310

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
            F++     + QPLM+IVP +    + A+ + + +  +K G    + F  +      +  
Sbjct: 311 VFTNGGVIARGQPLMEIVPANAPLLVDARASVELVDRLKPGLPVELLFVAFNQSTTPRVA 370

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLA 423
             +  +       D     Q YY+V +K+++        +++R G P E        +L 
Sbjct: 371 GEVTLVSADRLLDDKTQ--QPYYQVRIKVSEEGLRQLAGLDIRPGMPVEAFVRTGERSLL 428

Query: 424 QEIIHPITDNWPKI 437
             +  P+ D     
Sbjct: 429 NYLFKPLADRVHVA 442


>gi|290473563|ref|YP_003466433.1| alkaline protease secretion protein AprE [Xenorhabdus bovienii
           SS-2004]
 gi|289172866|emb|CBJ79637.1| Alkaline protease secretion protein aprE [Xenorhabdus bovienii
           SS-2004]
          Length = 445

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 70/429 (16%), Positives = 174/429 (40%), Gaps = 13/429 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L  +    L+   L+  IG++G   W+   P++  V+SSG ++ + N   ++SP +GII+
Sbjct: 18  LPLDANRYLRLGWLVIGIGLLGFFVWAAFAPLDKGVASSGIVVVDGNRKTVQSPANGIIR 77

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYD 125
           +     G Q+  G  L+    ++    ID  K  +         +  E+  L+ ++    
Sbjct: 78  QILASEGEQVKAGQVLVQLSQVQVNAQIDSLKQQLHTTLATEARLLAEQQGLEVISFPAT 137

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + ++  E R + +L    +   +  ++    ++ + ++ +    +++ +     + + + 
Sbjct: 138 LWDQQSEPRIKDILVLQKQLFLSRREMLRSDLAGMQQAEEGLSFQLKGLRNALTNKQQQQ 197

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             L+       + +T ++ L E+    +N   + +R   + +  + E       + +   
Sbjct: 198 VSLK-------EQVTNLRPLTEEGYFPRNRYLELQRSQSELSGSMAEMAGRIGQLEKQCQ 250

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E         A+Y +E+   L   Q    +  +KL   +      +I +P++G+++    
Sbjct: 251 ETRQRIIQRQADYQREVRSQLSDVQVQANELKNKLETTQFDLSHTSITAPVSGSVMGLTV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           F+        + LM+I+P      + A++    I  V  G    + F  +   +  K   
Sbjct: 311 FTQGGVVASGEKLMEILPAQSALEVEARLMVHLIDKVAMGQDVDLMFTAFNQNQTPKVTG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     +  + +  + YY++ +++T    +    + ++ G P EV     + +L  
Sbjct: 371 KVTVISAD--RLVDGVTREPYYQMRVRVTPEGMAQLAGLHIKPGMPVEVFVKTGSRSLLS 428

Query: 425 EIIHPITDN 433
            +  P+ D 
Sbjct: 429 YLFKPLMDR 437


>gi|163801474|ref|ZP_02195373.1| secretion protein, HlyD family [Vibrio sp. AND4]
 gi|159174963|gb|EDP59763.1| secretion protein, HlyD family [Vibrio sp. AND4]
          Length = 463

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 69/446 (15%), Positives = 165/446 (36%), Gaps = 14/446 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  I  + W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPDSARIMLWVMVLFFIAALGWASWAQIDKVTVGQGKVIPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN- 121
             G++K+  V+ G ++ +G  LL  +D         ++  + NL   +    +++  +  
Sbjct: 78  EGGLVKEILVKEGQRVEKGQQLLLIDDTRFRSDFREREQQVANLTASVLQLSASISSVQV 137

Query: 122 ---------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                     K  VL+    +    L +   +        +   ++++   L +   +++
Sbjct: 138 NRHFDNTNWEKNIVLDYGKLTFPPILEENQPRLTQRQKAEYKENLNNLRSQLSVIDQQVK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ + + LR      +K+L + + L ++  V + +L + +R V  +  E+  
Sbjct: 198 QKQQDLVEIQARVNNLRQSYRYAKKELEITQPLADEGIVPRIELLKLQRQVNDTRREMTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E           +  E    L   Q   +  +     LE    +  +
Sbjct: 258 SELKIPVIKSGIRESMLNRIDVALKFRSEQQEKLNDTQDQLSALVESSVGLEDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GTI      +     Q    +++IVP      +  K+ PK I  ++    A V+ 
Sbjct: 318 VSPVTGTIKTLNFNTVGGVIQPGIDIVEIVPTEDTLLVEVKIAPKDIAFLRPDLHAIVKL 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPA 411
             Y   +    +  +E I    +Q +       +Y V ++     F    ++ +  G  A
Sbjct: 378 TAYDFTKYGGLEGELEHISADTTQDEE---GNSFYIVRVRTEKTGFGQGTDLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKI 437
            V       T+ + ++ PI       
Sbjct: 435 SVDIITGKRTILEYLLKPILSAKTNA 460


>gi|45281|emb|CAA45856.1| aprE [Pseudomonas aeruginosa PAO1]
          Length = 432

 Score =  343 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 75/437 (17%), Positives = 154/437 (35%), Gaps = 13/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M + +KR+  A  +   LL + G  G + W+   P++  V+    ++       ++ P  
Sbjct: 1   MTRTVKRDENAYARLGWLLVLFGFGGALLWAAFAPLDQGVAVPATVIISGQRKSVQHPLG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLN 121
           G++K   V +G  +  G PL+  E  +    +D       N R     +  E      L 
Sbjct: 61  GVVKHILVRDGQHVEAGEPLIRMEPTQARANVDSLLNRYANARLNQARLQAEYDGRRTLE 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               + E+A        L  LG+      ++ +   +++   L      +  +      L
Sbjct: 121 MPAGLAEQAP-------LPTLGERLELQRQLLHSRQTALANELSALRANIEGLRAQLEGL 173

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                  R         L+  ++L E+  + +N L +QER + +    L E+      + 
Sbjct: 174 RQTEGNQRLQQRLLNSQLSGARDLAEEGYMPRNQLLEQERQLAEVNARLSESSGRFGQIR 233

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           + I E           Y KE++  L + Q        +L+          I +P++G + 
Sbjct: 234 QSIAEAQMRIAQREEEYRKEVNGQLAETQVNARTLWEELSSARYELRHAEIRAPVSGYVA 293

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F+        + LM IVP+S    +  ++    +  +  G    + F  +   +  
Sbjct: 294 GLKVFTDGGVIGPGELLMYIVPNSDSLEVEGQLAVNLVDRIHSGLPVEMLFTAFNQSKTP 353

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
           +    +  +       + N   Q YY V  ++   A      +++R G   +V       
Sbjct: 354 RVTGEVTMVSADRLLDEQNK--QPYYRVRAQVDAAAMGKLKGLQIRPGMAVQVFVRTGER 411

Query: 421 TLAQEIIHPITDNWPKI 437
           +L   +  P+ D     
Sbjct: 412 SLLNYLFKPLFDRAHVA 428


>gi|58616878|ref|YP_196077.1| alkaline protease secretion protein AprE [Ehrlichia ruminantium
           str. Gardel]
 gi|58416490|emb|CAI27603.1| Alkaline protease secretion protein aprE [Ehrlichia ruminantium
           str. Gardel]
          Length = 514

 Score =  343 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 76/441 (17%), Positives = 167/441 (37%), Gaps = 25/441 (5%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + +L   G+ G+  W+ + P++ SV + GE+++      ++    GII+K  V+
Sbjct: 80  PLFTGFIVILLFFGVFGI--WAAVAPLDGSVVAQGEVISSSEKQIVQHLEGGIIEKILVK 137

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +  P++   +      +D+ K  + ++       ++ L  +   Y+ ++     
Sbjct: 138 EGEFVEKNQPIIYLHNTTAQANLDIIKERMLDMLA----TEARLTAIKYNYNHIKFPNSI 193

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                 +   +      ++F     ++   + +   R + ++     L  + +       
Sbjct: 194 NNLSNKEIRDQIIKNQQQLFESHQKNISGQINILQQRTKQLHQELSGLSAQLTSATTQHQ 253

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++L   K+L     +S+  +   ER   +S  ++ +      ++ + I E   E   
Sbjct: 254 LINEELAAKKSLLADGYISKPYIIALERQYAESQGKIGQIESAIASVNQKIGENKLEIIN 313

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              N   +IS +L+      AD   ++   +   ++  I SP +G I   +  +      
Sbjct: 314 ITNNVQNKISIELKDTISAIADLKERMKTAQDVLDRTVIRSPQSGIITGLKYHTEGGVIP 373

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPHYADI 358
              P+  +VP      + AK+  + I+ +                KG  A VR   Y   
Sbjct: 374 PGAPITNVVPSDDNLIVDAKIQTRNIEEILSAQAKEVNMVSYENYKGLKAKVRLSAYNIR 433

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTA 417
           +      I+ ++      + N      YY++ + I  + +    N+ L  G PAEV    
Sbjct: 434 KVGLANGIVTQVSADALTEAN---GMRYYKIQVIIPKEQSKKLKNLRLYPGMPAEVFIIT 490

Query: 418 KNTTLAQEIIHPITDNWPKIF 438
           ++ TL   +  PIT  + K F
Sbjct: 491 QSRTLLNYLFTPITSTFEKAF 511


>gi|57238890|ref|YP_180026.1| alkaline protease secretion protein AprE [Ehrlichia ruminantium
           str. Welgevonden]
 gi|58578819|ref|YP_197031.1| alkaline protease secretion protein AprE [Ehrlichia ruminantium
           str. Welgevonden]
 gi|57160969|emb|CAH57875.1| putative secretion protein [Ehrlichia ruminantium str. Welgevonden]
 gi|58417445|emb|CAI26649.1| Alkaline protease secretion protein aprE [Ehrlichia ruminantium
           str. Welgevonden]
          Length = 514

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 76/441 (17%), Positives = 168/441 (38%), Gaps = 25/441 (5%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + +L   G+ G+  W+ + P++ SV + GE+++      ++    GII+K  V+
Sbjct: 80  PLFTGFIVILLFFGVFGI--WAAVAPLDGSVVAQGEVISSSEKQIVQHLEGGIIEKILVK 137

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +  P++   +      +D+ K  + ++       ++ L  +   Y+ ++     
Sbjct: 138 EGEFVEKNQPIIYLHNTTAQANLDIIKERMLDMLA----TEARLTAIKYNYNHIKFPNSI 193

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                 +   +      ++F     ++   + +   R + ++     L  + +       
Sbjct: 194 NNLSNKEIRDQIIKNQQQLFESHQKNISGQINILQQRTKQLHQELSGLSAQLTSATTQHQ 253

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++L   K+L     +S+  +   ER   +S  ++ +      ++ + I E   E   
Sbjct: 254 LINEELAAKKSLLADGYISKPYIIALERQYAESQGKIGQIESAIASVNQKIGENKLEIIN 313

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              N   +IS +L+      AD   ++   +   ++  I SP +G I   +  +      
Sbjct: 314 ITNNVQNKISIELKDTISAIADLKERMKTAQDVLDRTVIRSPQSGIITGLKYHTEGGVIP 373

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPHYADI 358
              P+  +VP +    + AK+  + I+ +                KG  A VR   Y   
Sbjct: 374 PGAPITNVVPSNDNLIVDAKIQTRNIEEILSAQTKEVNMVSYENYKGLKAKVRLSAYNIR 433

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTA 417
           +      I+ ++      + N      YY++ + I  + +    N+ L  G PAEV    
Sbjct: 434 KVGLANGIVTQVSADALTEAN---GMRYYKIQVIIPKEQSKKLKNLRLYPGMPAEVFIIT 490

Query: 418 KNTTLAQEIIHPITDNWPKIF 438
           ++ TL   +  PIT  + K F
Sbjct: 491 QSRTLLNYLFTPITSTFEKAF 511


>gi|118475239|ref|YP_891657.1| sape [Campylobacter fetus subsp. fetus 82-40]
 gi|4009448|gb|AAC97165.1| SapE [Campylobacter fetus]
 gi|118414465|gb|ABK82885.1| SapE [Campylobacter fetus subsp. fetus 82-40]
          Length = 427

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 70/434 (16%), Positives = 160/434 (36%), Gaps = 19/434 (4%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           ++   ++K    + ++ +     W    P+  +  + G++    N   ++    G++ K 
Sbjct: 4   KSESGTVKLGLFMILLLVGIFGVWMGTAPLNSAAVAPGQVGVLSNKKVVQHLEGGVVDKI 63

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVL 127
            V++G  + +G  L+  +++     +D+ K        L   ++ ++   D +    DV 
Sbjct: 64  YVKDGDVVKKGQVLIEIKNVRLNSELDIVKSEYLQTSVLVSRLEAQRDDKDQIEFSNDV- 122

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                   +   DF        S +FN     +   + +   R+  +      +      
Sbjct: 123 --------KSYPDFESASKGQIS-IFNEQNKLLKDEITILNQRIDQLRKQIEGINAIVDA 173

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +  + S  ++    + LF++    +  L   +R    +  E+   I +   +   I E 
Sbjct: 174 KKQRVESLNEETKEWERLFKEQLTDKIRLRDIQRERTAAGGEIASGISDIAKLNVQITET 233

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +       + +++ +  E+ +    D  ++L  L+  +E+  + +P+ G +V   + +
Sbjct: 234 KQQILFRERTFKEDVLKKYEEAKLKLTDLSARLRALDDQQERALVKAPVDGIVVELATHT 293

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                +  + +M IVP      + AK+    I  V  G  A +RF  +        +  +
Sbjct: 294 IGGVVRPGESIMSIVPDDSDYIMEAKMHITDIDKVHVGLPADIRFSAFNSKTAHVIEGEV 353

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             +     +         YYE+  K+T         N   L  G PAE++      T+  
Sbjct: 354 TYVSADTLKDS---HGNPYYEIKAKLTKKGIEEVKKNGFFLVPGMPAEIIVKTGERTVLS 410

Query: 425 EIIHPITDNWPKIF 438
            II P TD + + F
Sbjct: 411 YIIKPFTDMFQRAF 424


>gi|229522600|ref|ZP_04412016.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae TM 11079-80]
 gi|229340585|gb|EEO05591.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae TM 11079-80]
          Length = 463

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 72/440 (16%), Positives = 159/440 (36%), Gaps = 14/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I  I W+    I+      G+++    V  I++ 
Sbjct: 18  DDKTAALLLNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V  G Q+ +G  L+  +D         ++  + +L  ++    +++  +  
Sbjct: 78  EGGLVKQILVREGEQVQKGQQLILIDDTRFRSDFREREQQVASLTANVLQLSASISSVII 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                EK +           +    L D            +   + ++   L +   +++
Sbjct: 138 DESFEEKNWTNSVRLDYSKLAFPPVLSDSQPDLVERQRAQYRQDLDNLRNQLSVLSQQIQ 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++ E +   LR      +K+L + + L  +  V + +L + +R +  +  EL  
Sbjct: 198 QKQQDLIEAEARILNLRQSYDYAKKELDITEPLANEGVVPRIELLKLQRQLNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   + E           +  E    L Q Q   +        LE    +  +
Sbjct: 258 TELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ G +      +     Q    +++IVP      + A++ P+ I  ++    A V+F
Sbjct: 318 VSPVTGAVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIAFLRPELPAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    +  +E I    +Q +       +Y V ++  D +   D N+ +  G  A
Sbjct: 378 SAYDFTRYGGLEGTLEHISADTTQDEE---GNSFYLVRVRTKDTSLGHDQNLPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+   ++ PI 
Sbjct: 435 SVDIITGKRTVLDYLLKPIL 454


>gi|90411168|ref|ZP_01219181.1| putative secretion protein, HlyD family protein [Photobacterium
           profundum 3TCK]
 gi|90328014|gb|EAS44335.1| putative secretion protein, HlyD family protein [Photobacterium
           profundum 3TCK]
          Length = 464

 Score =  341 bits (876), Expect = 9e-92,   Method: Composition-based stats.
 Identities = 70/442 (15%), Positives = 157/442 (35%), Gaps = 16/442 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  I  I W+ +  ++     +G+++    +  +++ 
Sbjct: 17  DDKSAALLLNTPHSARIMLWVMVLFFIVAIAWASVAKLDKVTVGTGKVIPSSQLQIVQNL 76

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN- 121
             GI+K+  ++ G  + Q   LL  +D         +  ++   +       + L+ +  
Sbjct: 77  EGGIVKEVLIKEGQHVEQNQKLLLIDDTLFRSDFRERTQNLAGSQADSIRLNALLNSVTV 136

Query: 122 ---------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                     K   ++      +    D   +        +N  IS+V   L     ++ 
Sbjct: 137 NKKNANSNWRKSVDIKDNILKFDANFEDKHKRLVQRQKNEYNDKISNVQNQLSGMAQQIS 196

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                 ++ +++ + LR   +   K+  + K L ++  V + +L + +R +  +  EL  
Sbjct: 197 QKERELIETKSRMNNLRRSYNIASKEYNITKPLADEGVVPKIELLKLQRQLNDTKRELTS 256

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +       I E+  +     +N+  E   +L +        +     LE    +  +
Sbjct: 257 AELQIPVTQATIQEVIFKYINIASNFRSEAQAELNETSDQLDSLLESQVGLEDRVNRTVV 316

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           LSP+ GTI      +     Q    L++IVP      I AK+ P+ I  ++      ++F
Sbjct: 317 LSPVTGTIQKIYVNTVGGVIQPGMDLVEIVPSEDNLLIEAKIAPQDIGFLRPDLPVMLKF 376

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y           +E I     Q +       YY+V ++  D      +   + +  G 
Sbjct: 377 SAYDFTVYGGLSGYLETISADTIQDEE---GNSYYQVRIRTEDNTLKGPDGEPLPIIPGM 433

Query: 410 PAEVLFTAKNTTLAQEIIHPIT 431
            A         ++   ++ P+ 
Sbjct: 434 TASADIITGKRSVLDYLLKPVL 455


>gi|4019202|gb|AAC97198.1| SapE [Campylobacter fetus]
          Length = 427

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 70/434 (16%), Positives = 160/434 (36%), Gaps = 19/434 (4%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           ++   ++K    + ++ +     W    P+  +  + G++    N   ++    G++ K 
Sbjct: 4   KSESGTVKLGLFMILLLVGIFGVWMGTAPLNSAAVAPGQVGVLSNKKVVQHLEGGVVDKI 63

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVL 127
            V++G  + +G  L+  +++     +D+ K        L   ++ ++   D +    DV 
Sbjct: 64  YVKDGDVVKKGQVLIEIKNVRLNSELDIVKSEYLQTSVLVSRLEAQRDDKDQIEFNNDV- 122

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                   +   DF        S +FN     +   + +   R+  +      +      
Sbjct: 123 --------KSYPDFESASKGQIS-IFNEQNKLLKDEITILNQRIDQLRKQIEGINAIVDA 173

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +  + S  ++    + LF++    +  L   +R    +  E+   I +   +   I E 
Sbjct: 174 KKQRVESLNEETKEWERLFKEQLTDKIRLRDIQRERTAAGGEIASGISDIAKLNVQITET 233

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +       + +++ +  E+ +    D  ++L  L+  +E+  + +P+ G +V   + +
Sbjct: 234 KQQILFRERTFKEDVLKKYEEAKLKLTDLSARLRALDDQQERALVKAPVDGIVVELATHT 293

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                +  + +M IVP      + AK+    I  V  G  A +RF  +        +  +
Sbjct: 294 IGGVVRPGESIMSIVPDDSDYIMEAKMHITDIDKVYVGLPADIRFSAFNSKTAHVIEGEV 353

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             +     +         YYE+  K+T         N   L  G PAE++      T+  
Sbjct: 354 TYVSADTLKDS---HGNPYYEIKAKLTKKGIEEVKKNGFFLVPGMPAEIIVKTGERTVLS 410

Query: 425 EIIHPITDNWPKIF 438
            II P TD + + F
Sbjct: 411 YIIKPFTDMFQRAF 424


>gi|145298658|ref|YP_001141499.1| HlyD family secretion protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851430|gb|ABO89751.1| secretion protein, HlyD family [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 472

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 71/437 (16%), Positives = 161/437 (36%), Gaps = 14/437 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P   + +     +  +  I W+    ++      G+++    +  I++   GI+K+  
Sbjct: 35  STPTRARVLLWACFLFFMSAIVWAAWAELDEVTVGQGKVIPSRQLQVIQNLEGGIVKEIF 94

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN---------N 122
           V  G  + +G PLL  +D         ++  +  L+  I   ++ +  +           
Sbjct: 95  VREGDIVEEGQPLLRIDDTRFRSDFREREEELVTLKGGIARLRAEIKSVVVKTGPNLSWR 154

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  +++K      +   +   +Y +    V +  ++S+   L +   ++       ++L 
Sbjct: 155 EQVLIDKQPIDFPDGFENVFAEYAAREKSVQDERLNSLNNQLYILGQQIEQKEQELIELN 214

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            K   +   +   +++L + + L ++  V Q +L + ER V +   EL  N      +  
Sbjct: 215 AKIRTVGRSVDLARQELNISRPLAKEGIVPQVELIKLERQVNEMQGELESNRLIIPKLNS 274

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + E   + N     +  +   +L + Q            L    ++ ++++P+ GTI  
Sbjct: 275 VLRESISKRNDIALKFRADSQTELNELQGKLRQLSEGQVGLRDRVDRTSVIAPLKGTIKK 334

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +     Q    LM+IVP      + AKV+PK I  ++ G  A V+   Y       
Sbjct: 335 LKINTLGGVVQPGMDLMEIVPLEDTLLVEAKVSPKDIAFLRPGLDAVVKITAYDFTVYGG 394

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNT 420
               +E+I     Q +       +Y V ++       D  N + +  G  A         
Sbjct: 395 LHGKVEQISADSIQDEE---GNSFYLVRVRTEKSYLGDELNALPIIPGMLASADIITGKK 451

Query: 421 TLAQEIIHPITDNWPKI 437
           ++   ++ PI       
Sbjct: 452 SVLDYLLKPILRAKQSA 468


>gi|54302264|ref|YP_132257.1| HlyD family secretion protein [Photobacterium profundum SS9]
 gi|46915685|emb|CAG22457.1| putative secretion protein, HlyD family [Photobacterium profundum
           SS9]
          Length = 476

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 156/442 (35%), Gaps = 16/442 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + M  + ++  I  I W+ +  ++     +G+++    +  +++ 
Sbjct: 29  DDKSAALLLNTPHSARIMLWVMVLFFIVAIAWASVAELDKVTVGTGKVIPSSQLQIVQNL 88

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN- 121
             GI+KK  ++ G  + Q   LL  +D         +  ++   +       + L+ +  
Sbjct: 89  EGGIVKKVLIKEGQHVEQNQKLLLIDDTLFRSDFRERTQNLAGSQADSIRLNALLNSVTV 148

Query: 122 ---------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                     K   +E      +    +   +        +   IS++   L     ++ 
Sbjct: 149 NKKNANSNWRKSVDVEDNILKFDANFEEKHKRLVQRQKNEYEDKISNIQNQLSGMAQQIS 208

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                 ++ +++ + LR   +   K+  + K L ++  V + +L + +R +  +  EL  
Sbjct: 209 QKERELIETKSRVNNLRRSYNIASKEYNITKPLADEGVVPKIELLKLQRQLNDTKRELTS 268

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +       I E+  +     +N+  E   +L +        +     L+    +  +
Sbjct: 269 AELQIPVTQATIQEVIFKYINIASNFRSEAQAELNETSDQLDGLLESQVGLKDRVNRTVV 328

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           LSP+ GTI      +     Q    L++IVP      I AK+ P+ I  ++      ++F
Sbjct: 329 LSPVTGTIQKIYVNTVGGVIQPGMDLVEIVPSEDNLLIEAKIAPQDIGFLRPDLPVMLKF 388

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y           +E I     Q +       YY+V ++  D      +   + +  G 
Sbjct: 389 SAYDFTVYGGLSGYLETISADTIQDEE---GNSYYQVRIRTEDNTLKGPDGEPLPIIPGM 445

Query: 410 PAEVLFTAKNTTLAQEIIHPIT 431
            A         ++   ++ P+ 
Sbjct: 446 TASADIITGKRSVLDYLLKPVL 467


>gi|27367509|ref|NP_763036.1| protease ABC transporter membrane fusion protein PrtE/AprE [Vibrio
           vulnificus CMCP6]
 gi|37677311|ref|NP_937707.1| membrane-fusion protein [Vibrio vulnificus YJ016]
 gi|320159363|ref|YP_004191741.1| protease exporter membrane fusion protein (MFP) family component
           PrtE/AprE [Vibrio vulnificus MO6-24/O]
 gi|27359081|gb|AAO08026.1| ABC-type protease exporter, membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio vulnificus CMCP6]
 gi|37201857|dbj|BAC97677.1| membrane-fusion protein [Vibrio vulnificus YJ016]
 gi|319934675|gb|ADV89538.1| ABC-type protease exporter, membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio vulnificus MO6-24/O]
          Length = 463

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 68/448 (15%), Positives = 164/448 (36%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P + + M  + ++     I W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPTNARLMLWVIVLFFAVAIGWAAWAEIDKVTVGQGKVIPSSQIQIVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V+ G  + +G  LL  +D         ++  + NL   +    S++D +  
Sbjct: 78  EGGLVKEILVKEGQLVQKGQQLLLIDDTRFRSDYREREQQVANLTAAVLQLTSSIDSVEI 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +     +E          +   +L     +  +     +   ++++   + +   +++
Sbjct: 138 DEEFTNAEWEKSVVIKYGQLAFPAELEQQQPELIARQRAEYRQDLNNLRNQISVLTQQVK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   LR      +K+L + + L ++  V + +L + +R V  +  EL  
Sbjct: 198 QKQQDLVEIQARVKNLRQGHVFAKKELEITQPLADEGVVPKIELLKLQRQVNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   I E           +  E    L + Q   +  +     L    ++  +
Sbjct: 258 TELKIPVLQSTIREAMLSRIDAALKFRSEQQEKLNKTQDQLSALVESAVGLRDRVKRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ G I      +     Q    +++IVP      + AK+ P+ I  ++    A V+F
Sbjct: 318 ISPVTGKIKTLNINTVGGVIQPGMDIVEIVPTEDSLLVEAKIAPQDIAFLRPNLPAVVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   +       +E I    +Q +       +Y V ++     F  D  + +  G  A
Sbjct: 378 TAYDFTKYGGLDGELEHISADTTQDEE---GNSFYIVRVRTEKTNFGQDAELPIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI        +
Sbjct: 435 SVDIITGKRTVLEYLLKPILSAQNNALK 462


>gi|116049199|ref|YP_791998.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|296390374|ref|ZP_06879849.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           PAb1]
 gi|115584420|gb|ABJ10435.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 432

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 73/437 (16%), Positives = 153/437 (35%), Gaps = 13/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M + +KR+  A  +   LL + G  G + W+   P++  V+    ++       ++ P  
Sbjct: 1   MTRTVKRDENAYARLGWLLVLFGFGGALLWAAFAPLDQGVAVPATVIISGQRKSVQHPLG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLN 121
           G++K   V +G  +  G PL+  E  +    +D       N R     +  E      L 
Sbjct: 61  GVVKHILVRDGQHVEAGEPLIRMEPTQARANVDSLLNRYANARLNQARLQAEYDGRRTLE 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               + E+A        L  LG+      ++ +   +++   L      +  +      L
Sbjct: 121 MPAGLAEQAP-------LPTLGERLELQRQLLHSRQTALANELSALRANIEGLRAQLEGL 173

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                  R         L+  ++L E+  + +N L +QER + +    L E+      + 
Sbjct: 174 RQTEGNQRLQQRLLNSQLSGARDLAEEGYMPRNQLLEQERQLAEVNARLSESSGRFGQIR 233

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           + I E           Y KE++  L + Q        +L+          I +P++G + 
Sbjct: 234 QSIAEAQMRIAQREEEYRKEVNGQLAETQVNARTLWEELSSARYELRHAEIRAPVSGYVA 293

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F+        + LM IVP+S    +  ++    +  +  G    + F  +   +  
Sbjct: 294 GLKVFTDGGVIGPGELLMYIVPNSDSLEVEGQLAVNLVDRIHSGLPVEMLFTAFNQSKTP 353

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
           +    +  +       + N   Q YY +  ++          +++R G   +V       
Sbjct: 354 RVTGEVTMVSADRLLDEQNK--QPYYALRAQVDAAGMGKLKGLQIRPGMAVQVFVRTGER 411

Query: 421 TLAQEIIHPITDNWPKI 437
           +L   +  P+ D     
Sbjct: 412 SLLNYLFKPLFDRAHVA 428


>gi|269104723|ref|ZP_06157419.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161363|gb|EEZ39860.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 464

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 73/442 (16%), Positives = 161/442 (36%), Gaps = 16/442 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + ++  I    W+ +  ++   +  G+++    +  +++ 
Sbjct: 17  DDKSAALLLNTPTSARILLWVILLFFIVAFAWASVAKLDKVTTGIGKVIPSSQLQVVQNL 76

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GI+K+  V  G  + +G  LL  +D         K  S+  L+  I      L  +  
Sbjct: 77  EGGIVKQVMVREGEHVTKGQKLLLIDDTLFQSDYKEKDQSVAGLQADIIRFNGLLASIKV 136

Query: 123 KYDVLEKAFESR---EEQLLDFLGKYHST-------CSKVFNYGISSVYRSLKMKLTRMR 172
                 K ++     +   L F  +Y  +           +   IS++   L +   ++ 
Sbjct: 137 DKSQASKDWQKTVVIKPAQLAFTSEYKKSHPDKVRRQQNEYRDNISNLENQLSVVAQQIS 196

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  + +++ + L+   +   K+  + K L ++  V + +L + +R +  +  +L  
Sbjct: 197 QKQRELTENQSRIANLQRSYNIALKEYNITKPLADEGVVPKIELLKLQRSLNDTKRDLTS 256

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +       I E   +       +  +I   L       +        LE   ++ T+
Sbjct: 257 ARLQAPVAKSAIKEATFKYMDIALQFRSDIQSKLNDTSDQLSSMNETRIGLEDRVKRTTV 316

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GTI      +     Q    L++IVP      I AK+ P+ I  ++ G  A V+F
Sbjct: 317 VSPVTGTIQKIYVNTVGGVIQPGMNLIEIVPTEDTLLIEAKIAPQDIGFLRPGLKAIVKF 376

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGF 409
             Y          ++E I     Q     +   +Y+V ++    + +     ++ +  G 
Sbjct: 377 TAYDFTSYGGLDGVVETISADTIQD---KEGNSFYQVRVRTDKNSLTAPDGESLPIIPGM 433

Query: 410 PAEVLFTAKNTTLAQEIIHPIT 431
            A V       ++   ++ PI 
Sbjct: 434 TASVDIITGKRSVLDYLLKPIL 455


>gi|126176193|ref|YP_001052342.1| HlyD family type I secretion membrane fusion protein [Shewanella
           baltica OS155]
 gi|153002487|ref|YP_001368168.1| HlyD family type I secretion membrane fusion protein [Shewanella
           baltica OS185]
 gi|160877204|ref|YP_001556520.1| HlyD family type I secretion membrane fusion protein [Shewanella
           baltica OS195]
 gi|217975054|ref|YP_002359805.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS223]
 gi|304412241|ref|ZP_07393850.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS183]
 gi|307306985|ref|ZP_07586725.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica BA175]
 gi|125999398|gb|ABN63473.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS155]
 gi|151367105|gb|ABS10105.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS185]
 gi|160862726|gb|ABX51260.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS195]
 gi|217500189|gb|ACK48382.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS223]
 gi|304349507|gb|EFM13916.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS183]
 gi|306910563|gb|EFN40993.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica BA175]
 gi|315269408|gb|ADT96261.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           baltica OS678]
          Length = 460

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 171/448 (38%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P+  + +       ++  + W+    ++   + +G+++    V  I+
Sbjct: 12  MVDDVYGAMMTDAPSGHRLIIWALAAMVVCFLLWAGFAKLDKVTTGTGKVIPSSQVQVIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI+++  V+ G  + +G PL+  +D         ++  +  L+ +    ++ LD +
Sbjct: 72  SLDGGIMQELYVQEGEMVTKGQPLVRIDDTRFRSDYAQQEQEVFGLKTNAIRMRAELDSI 131

Query: 121 N--------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                     +  ++ K      E ++           + +N  + ++   L++ + +++
Sbjct: 132 LISDMTSDWREQVLITKKALVFPENIIAAEPALVKRQQEEYNGRLDNLSNQLEILVRQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  DL +K++ L   +    ++L + + L +K  V + +L + ER V     EL  
Sbjct: 192 QRQQEIDDLASKTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLERTVNDLQGELNS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +   ++E   +       Y  ++   L + Q   +         +    +  I
Sbjct: 252 MRLLRPKVKAAMDEAILKRREAVFVYAADLRAQLNETQTRLSRMNEAQVGAQDKVSKAII 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GTI      +     Q    +++IVP      I  K+ PK I  +  G  A V+ 
Sbjct: 312 TSPVNGTIKTTHINTLGGVVQPGVDIIEIVPSEDQLLIETKILPKDIAFLHPGLPAVVKI 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R    K  +E I    SQ +       YY + ++  + + + N+   + +  G 
Sbjct: 372 TAYDFTRYGGLKGTVEHISADTSQDEE---GNSYYLIRVRTAESSLTKNDGTQMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTSVDVITGQRSILEYILNPILRAKDTA 456


>gi|15596444|ref|NP_249938.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           PAO1]
 gi|107100696|ref|ZP_01364614.1| hypothetical protein PaerPA_01001723 [Pseudomonas aeruginosa PACS2]
 gi|218892779|ref|YP_002441648.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           LESB58]
 gi|254234374|ref|ZP_04927697.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           C3719]
 gi|254239623|ref|ZP_04932945.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           2192]
 gi|12230884|sp|Q03025|APRE_PSEAE RecName: Full=Alkaline protease secretion protein AprE
 gi|9947178|gb|AAG04636.1|AE004554_4 alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           PAO1]
 gi|126166305|gb|EAZ51816.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           C3719]
 gi|126193001|gb|EAZ57064.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           2192]
 gi|218773007|emb|CAW28819.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           LESB58]
          Length = 432

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 74/437 (16%), Positives = 154/437 (35%), Gaps = 13/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M + +KR+  A  +   LL + G  G + W+   P++  V+    ++       ++ P  
Sbjct: 1   MTRTVKRDENAYARLGWLLVLFGFGGALLWAAFAPLDQGVAVPATVIISGQRKSVQHPLG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLN 121
           G++K   V +G  +  G PL+  E  +    +D       N R     +  E      L 
Sbjct: 61  GVVKHILVRDGQHVEAGEPLIRMEPTQARANVDSLLNRYANARLNQARLQAEYDGRRTLE 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               + E+A        L  LG+      ++ +   +++   L      +  +      L
Sbjct: 121 MPAGLAEQAP-------LPTLGERLELQRQLLHSRQTALANELSALRANIEGLRAQLEGL 173

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                  R         L+  ++L E+  + +N L +QER + +    L E+      + 
Sbjct: 174 RQTEGNQRLQQRLLNSQLSGARDLAEEGYMPRNQLLEQERQLAEVNARLSESSGRFGQIR 233

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           + I E           Y KE++  L + Q        +L+          I +P++G + 
Sbjct: 234 QSIAEAQMRIAQREEEYRKEVNGQLAETQVNARTLWEELSSARYELRHAEIRAPVSGYVA 293

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F+        + LM IVP+S    +  ++    +  +  G    + F  +   +  
Sbjct: 294 GLKVFTDGGVIGPGELLMYIVPNSDSLEVEGQLAVNLVDRIHSGLPVEMLFTAFNQSKTP 353

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
           +    +  +       + N   Q YY +  ++   A      +++R G   +V       
Sbjct: 354 RVTGEVTMVSADRLLDEQNK--QPYYALRAQVDAAAMGKLKGLQIRPGMAVQVFVRTGER 411

Query: 421 TLAQEIIHPITDNWPKI 437
           +L   +  P+ D     
Sbjct: 412 SLLNYLFKPLFDRAHVA 428


>gi|229592737|ref|YP_002874856.1| hypothetical protein PFLU5357 [Pseudomonas fluorescens SBW25]
 gi|229364603|emb|CAY52501.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 441

 Score =  340 bits (872), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 63/429 (14%), Positives = 158/429 (36%), Gaps = 16/429 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L  +     +   LL + G  G + W+ L P++  V+ SG+++   +   ++ P  GI++
Sbjct: 17  LALDDKKYSRIGWLLVLGGFAGFLGWAALAPLDKGVAVSGKVMVSGHRKTVQHPAGGIVE 76

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYD 125
           +  V +G  +  G  LL  ++      +   +            +  E   L  +    +
Sbjct: 77  RIDVRDGEVVSAGQVLLRLKETPLRGQMQSLRSQYVASLASEARLSAESEGLSAITFAPE 136

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +L+   +      L+   +  ++ ++        +  ++     ++R    ++     + 
Sbjct: 137 LLD---DPEAAATLNLQRQLFNSRAQALATEQQGLRETIAGAEAQLRGTRDSQASKVQQR 193

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           + L        + L  ++ L     + +N L   ER+  +    + E+      + R + 
Sbjct: 194 AAL-------SEQLQGLRALARDGYIPRNRLLDSERLYSQVDGAIAEDYGRIGQLQRQVL 246

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           EL         ++ K++   L + +    D  ++L   E       + +P +G +V    
Sbjct: 247 ELRLRIRHLGEDFQKDLRGQLAETRTRSDDLRNRLASAEFELANSLVRAPASGVVVGLDV 306

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           ++     +  Q LM IVP  +   + A+V  + +  V  G    + F  +      +   
Sbjct: 307 YTEGGVIKPGQALMDIVPQGEPLLVEARVPVQMVDKVHPGLPVELLFSAFNQATTPRVAG 366

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  +     +Q +    + YY +  +++       + +++R G P E        ++  
Sbjct: 367 EVTLVSAD--RQVDERTDEPYYTLRAQVSAAGMQQLDGVQIRPGMPVETFIKTGERSMLN 424

Query: 425 EIIHPITDN 433
            +  P+ D 
Sbjct: 425 YLFKPLLDR 433


>gi|148255704|ref|YP_001240289.1| putative toxin/protease secretion system [Bradyrhizobium sp. BTAi1]
 gi|146407877|gb|ABQ36383.1| putative toxin/protease secretion system [Bradyrhizobium sp. BTAi1]
          Length = 661

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 75/411 (18%), Positives = 162/411 (39%), Gaps = 13/411 (3%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
             W  L+P+  ++   G ++ + NV  I+ P  GII + +V+NG ++  G  L+  +  +
Sbjct: 257 GGWLTLVPLAGAIVVPGNLVVQSNVKAIQHPTGGIIAEIKVDNGKRVTAGDLLVRLDATQ 316

Query: 92  TTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +   +      +   R     +  E+  LD       +  +  ++    ++       ++
Sbjct: 317 SQAQLQAITKQLNEQRAKIARLSAERDGLDQPEYPTSLTSRPDDAHVRAVI-------AS 369

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            + +F    ++     ++   R+  +      +E++       +   + +L  ++ L++K
Sbjct: 370 ENALFKARATTRKSQKELLQGRIVQLNNEISGMESQLDSKNKQIELIKGELAGVQELYDK 429

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             V    L   +R   +   E  + +         I+E   +      ++  E+ +DL  
Sbjct: 430 RLVPLTRLTTLQREAARIDGERGQLVSSVAETRSKISEAELQTVKIDQDFRSEVVKDLGD 489

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            Q    D + K        ++  + +P +GTI      +     +  + +M++VP S   
Sbjct: 490 AQAKEGDLVEKGVAARDQLDRIEMRAPNSGTIHQLAVHTIGGVIKPGETIMELVPDSDEL 549

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            + A V PK I HV  G  A VRF  +      +    +  + P I+    +  T  +Y 
Sbjct: 550 QVEAHVQPKDIDHVHTGQNAMVRFNAFNQRTTPQLSGQVSFVAPDITNDPRSGST--FYT 607

Query: 389 VILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           V + +++        + L  G  AEV     + T+   ++ PITD W + F
Sbjct: 608 VRITLSEEERQRLGGVNLMPGMQAEVYVQTGSRTMLSYLMKPITDQWRRAF 658


>gi|92118502|ref|YP_578231.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
 gi|91801396|gb|ABE63771.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
          Length = 437

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 68/429 (15%), Positives = 162/429 (37%), Gaps = 11/429 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             L   T L ++   G+  W+    +  +V + G ++ + +V +++ P  G+I + +V +
Sbjct: 14  RYLLAGTFLVLLVTFGIGGWAATTELSSAVVAPGVLVVDSSVKKVQHPTGGVIGELRVRD 73

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAF 131
           G  +  G  L+  ++ +T     +   S+  L   +  ++TE+  +  L     +L++A 
Sbjct: 74  GDHVRAGDILVRLDETQTRAAATIITKSVDELLARQARLETERDNIPELAFPAALLDRAH 133

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +   +       +  +    +F+    +          R   +       + +    +  
Sbjct: 134 DPASD-----AARAVAAERSLFDLRRQAREGQKSQLKERSAQLQDEIKGYQGQVEAKKKE 188

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   Q++L  ++ LF+KN V  + L   ER   +   E  +             E+  + 
Sbjct: 189 VDFIQQELEGVRTLFQKNLVPISRLTALERDSARIEGERSQLSGMIAQAKGKTAEIQLQI 248

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                +   E+ +DL + +   ++   +        ++  I +P  G +      +    
Sbjct: 249 IQIDQDLRSEVGKDLVEVRSKISEMAERKIAAVDQLQRIDIRAPQDGVVYQLSVHTVGGV 308

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               + +M IVP +    +  K+ P+ I HV  G  A +RF  +      +    +  I 
Sbjct: 309 IAPGEQIMLIVPDADTLAVEVKIAPQDIDHVHVGQLAILRFSAFNQHTTPEITGAVSVIS 368

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           P ++Q         +Y   + +         +++L  G PA+      + T+   ++ P+
Sbjct: 369 PDLTQDQRTGT--SFYTTRIALKPEELERLGSVKLIPGMPADAFIQMGDRTVLSYLMKPL 426

Query: 431 TDNWPKIFE 439
            D   + F+
Sbjct: 427 RDQAARAFK 435


>gi|330447360|ref|ZP_08311009.1| type I secretion membrane fusion, HlyD family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328491551|dbj|GAA05506.1| type I secretion membrane fusion, HlyD family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 460

 Score =  340 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 76/450 (16%), Positives = 164/450 (36%), Gaps = 14/450 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P   + +    +  I+    WS    +++    +G+++    V  I+
Sbjct: 12  MVDDVYGAMMLSSPKKHRIVIRALMAFIVCFFVWSYFASLDVVTRGTGKVIPSSQVQIIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI++   V  G  + +G PL   +D      +  ++    +LR +I   +  +  +
Sbjct: 72  SLDGGILQNMYVTEGMAVKKGQPLARIDDTRVRSDLAQQEDEEGSLRANILRLQQEIADI 131

Query: 121 NNKYD--------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           +            +++         L              ++  +S +   L +   ++ 
Sbjct: 132 HLNPTSTDWHTQIIVDDKPLVYPSDLFKDEPVLLKRQQAEYHGRLSELNNQLSILAKQIV 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                   + ++   L+  L+   K+L M + + +K  VS+ +L + +R +     EL +
Sbjct: 192 QKEQENESINSQIRTLKNSLNLVLKELRMTQPMAQKGIVSEVELLKLQRQINDIKGELSK 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +Q   L   +E   +      NY KE    L + +   +        ++   ++  I
Sbjct: 252 LYLQQPKTLAARDEAILKRREAALNYNKEARAKLNELESRLSRLTEAQVGVQDKVDRTVI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GTI      +     +    +++IVP      I AK+ PK I  +  G  A V+ 
Sbjct: 312 ISPVNGTIKTIHINTIGGVVKPGADIIEIVPTEDQLVIEAKIKPKDIAFLHPGLPAVVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R       +E I    SQ     +   +Y V ++         +   + +  G 
Sbjct: 372 TAYNFTRYGGLDGTLEHISADTSQD---KKGNSFYLVRIRTKHSQLIKKDGTPMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
              V   +   T+   I++PI       F+
Sbjct: 429 LTTVDIISGKRTVLDYILNPILRAKDTAFK 458


>gi|226943742|ref|YP_002798815.1| type I secretion membrane fusion protein [Azotobacter vinelandii
           DJ]
 gi|226718669|gb|ACO77840.1| Type I secretion membrane fusion protein [Azotobacter vinelandii
           DJ]
          Length = 441

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 80/435 (18%), Positives = 168/435 (38%), Gaps = 15/435 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L  +   +     L+  +      TW+ + P++ +  + G +  +     ++    GI
Sbjct: 14  AELPTSDHGTRAIGFLIVFVTFGIFGTWAAVAPLDSAALAPGVVTVQTYRKTVQHLEGGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNK 123
           +K+    +G  +  G PL+  ++ +     ++ +  +   + +   +  E+  L+ +N  
Sbjct: 74  VKELHARDGDMVKAGDPLIVLDETQIRAENEVTRSQLIAAQAMEARLRAERDNLETINFS 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +   +  +RE              ++VF    +S      +   R+  ++     L+ 
Sbjct: 134 SMLELDSARAREA---------RDGETQVFTARRNSRLGEEAVLEKRIGQLHEQINGLKG 184

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 +L +S  K++  +K L  +  V +  L +QER + K   E+ ++  E   +   
Sbjct: 185 VIRTKGSLQNSFTKEIRELKELLAEGFVDKQRLLEQERNLDKLRAEIADHSSEITKIRLQ 244

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           INE   +      ++  ++   L + Q    D   K + LE    +  I +P  G I+  
Sbjct: 245 INETELQILQLNKDFNADVVSQLAEVQTKVFDLQEKKSALEDRLSRVVIRAPEDGMILGM 304

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +         PL+ IVP      I A+V P  I  V+ G +A +RF  +        
Sbjct: 305 TVHTIGGVINPGTPLLDIVPSISDLVIEAQVAPSDIDRVEAGKSADIRFSGFNSRTTPVV 364

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDL-AFSDNNIELRNGFPAEVLFTAKNTTL 422
           +  + ++       + N     YY   + +T+  A     + L+ G PAEV       T+
Sbjct: 365 EGKVLRVSADRLVDEKN--GMPYYLARIGLTEEGARRLGELRLQPGMPAEVYINTGKRTM 422

Query: 423 AQEIIHPITDNWPKI 437
            Q ++ P TD + + 
Sbjct: 423 LQYLLQPATDAFARS 437


>gi|60265603|gb|AAX15948.1| PrtC [Xenorhabdus nematophila]
          Length = 445

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 76/429 (17%), Positives = 174/429 (40%), Gaps = 13/429 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L  +    L+   L+  IGI+G + W+   P++  V+SSG ++ + N   ++SP +GII+
Sbjct: 18  LPLDANRYLRTGWLIIGIGILGFLIWAAFAPLDKGVASSGTVVVDGNRKTVQSPANGIIR 77

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYD 125
           + QV+ G Q+  G  L+    ++    ID  K  +         +  E+  +D +     
Sbjct: 78  QIQVKEGQQVKAGQVLVQLSQVQVNAQIDSFKQQLYTTLATEARLLAEQQGIDDIVFPSA 137

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +L +  E R    L    +  ++  ++    ++ + ++ +    +++ +   R+  + + 
Sbjct: 138 LLNQQSEPRINDTLALQKQLFASRREMLRSDLAGMRQAEEGLNFQIKGLREARVSKQQQQ 197

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           S L+       + +  ++ L E+    +N   +  R   + +  L E       + +   
Sbjct: 198 SSLK-------EQIANLRPLTEEGYFPRNRYLELLRSQSELSGSLAEMTGRMGQLEKQQQ 250

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E         A+Y +E+   L   Q    +  +KL   +      +I++P+ G++V    
Sbjct: 251 ETQQRVIQRQADYQREVRTQLADVQVLANELRNKLEAAQFDLSHTSIIAPVEGSVVGLTV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           F+        + LM+I+P      + A++    I  +  G    + F  +   R  K   
Sbjct: 311 FTQGGVVASGEKLMEILPAQSALEVEARLMVHLIDKIAVGQDVDLMFTAFNQSRTPKVTG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  +     +  + +  + YY++ L++          + ++ G P EV     + +L  
Sbjct: 371 KVTVVSAD--RLVDGITREPYYQMRLRVAPEGMEKLAGLNIKPGMPVEVFVKTGSRSLLS 428

Query: 425 EIIHPITDN 433
            +  P+ D 
Sbjct: 429 YLFKPLMDR 437


>gi|313106230|ref|ZP_07792480.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           39016]
 gi|310878982|gb|EFQ37576.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           39016]
          Length = 432

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 73/434 (16%), Positives = 155/434 (35%), Gaps = 7/434 (1%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M + +KR+  A  +   LL + G  G + W+   P++  V+    ++       ++ P  
Sbjct: 1   MTRTVKRDENAYARLGWLLVLFGFGGALLWAAFAPLDQGVAVPATVIISGQRKSVQHPLG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++K   V +G  +  G PL+  E  +    +D       N R +    ++  +      
Sbjct: 61  GVVKHILVRDGQHVEAGEPLIRMEPTQARANVDSLLNRYANARLNQARLQAEYEGRR--- 117

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             LE      E+  L  LG+      ++ +   +++   L      +  +      L   
Sbjct: 118 -TLEMPAGLAEQAPLPTLGERLELQRQLLHSRQTALANELSALRANIEGLRAQLEGLRQT 176

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               R         L+  ++L E+  + +N L +QER + +    L E+      + + I
Sbjct: 177 EGNQRLQQRLLNSQLSGARDLAEEGYMPRNQLLEQERQLAEVNARLSESSGRFGQIRQSI 236

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E           Y KE++  L + Q        +L+          I +P++G +   +
Sbjct: 237 AEAQMRIAQREEEYRKEVNGQLAETQVNARTLWEELSSARYELRHAEIRAPVSGYVAGLK 296

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
            F+        + LM IVP+S    +  ++    +  +  G    + F  +   +  +  
Sbjct: 297 VFTDGGVIGPGELLMYIVPNSDSLEVEGQLAVNLVDRIHSGLPVEMLFTAFNQSKTPRVT 356

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLA 423
             +  +       + N   Q YY +  ++   A      +++R G   +V       +L 
Sbjct: 357 GEVTMVSADRLLDEQNK--QPYYALRAQVDAAAMGKLKGLQIRPGMAVQVFVRTGERSLL 414

Query: 424 QEIIHPITDNWPKI 437
             +  P+ D     
Sbjct: 415 NYLFKPLFDRAHVA 428


>gi|283835509|ref|ZP_06355250.1| LapA secretion membrane fusion protein [Citrobacter youngae ATCC
           29220]
 gi|291068714|gb|EFE06823.1| LapA secretion membrane fusion protein [Citrobacter youngae ATCC
           29220]
          Length = 457

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 73/430 (16%), Positives = 159/430 (36%), Gaps = 15/430 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + + + +  + P  ++      +  ++    W+    I+      G+ +    + +I++ 
Sbjct: 30  NEVSQAIIDDSPRVIRLTLWTILALVVLSFVWAGFAKIDEVTRGEGKAIPSSKLQKIQNL 89

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GI+ +  V  G  +  GTPLL  +D      +   +     LR  ++   + ++   N
Sbjct: 90  EGGIVTELYVHEGQIVNAGTPLLHLDDTRFASNVGETEADKLGLRAKVERLTAEVE---N 146

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V+     S+   +     + +++  + F+  IS +   L  K   +R       D E
Sbjct: 147 QDFVISPEIASKAPDVARGETELYNSRREQFHNEISGLEEQLVQKKQELR-------DFE 199

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           +K    +  L   ++++ M + L    A+S+ +L +  R   ++  +L            
Sbjct: 200 SKQDQFKHSLGLIRQEIKMSEPLLASGAISKVELLRLRRTEVETAGQLNSISLSLPKAAS 259

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            INE+ ++       +  +    L + +   +   + +  LE    +  + SP+ G +  
Sbjct: 260 EINEIENKIGESRGRFQSDALAQLNEARTNLSKTQASVKALEDRVNRTMVTSPVRGIVQQ 319

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +     Q    L++IVP      I AK+ P+ I  +  G  A V+F  Y       
Sbjct: 320 VMVNTIGGVIQPGSDLVEIVPLDDKLLIEAKIQPRDIAFLHPGQHAMVKFTAYDYTIYGG 379

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNT 420
            +  + +I P         Q + +Y V L+              +  G  A V       
Sbjct: 380 LEGEVVQISPDTVTD---KQGRSFYIVRLQTDKNYLGTKEHPMLVIPGMVASVDILTGKK 436

Query: 421 TLAQEIIHPI 430
           T+   ++ PI
Sbjct: 437 TILSYLLKPI 446


>gi|197337141|ref|YP_002158807.1| type I secretion adaptor protein [Vibrio fischeri MJ11]
 gi|197314393|gb|ACH63842.1| type I secretion adaptor protein [Vibrio fischeri MJ11]
          Length = 463

 Score =  339 bits (869), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 74/446 (16%), Positives = 161/446 (36%), Gaps = 14/446 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P + K +  + ++     I W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPTNAKILLWVIVVFFCIAIGWASWAEIDKVTVGQGKVIPSSQLQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V+ G Q+ +G  LL  +D         +K  + NL        +++D +  
Sbjct: 78  EGGLVKEMLVKEGDQVEKGQQLLLIDDTRFRSDFRERKKQLINLTASAQQLAASMDSILI 137

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSK----------VFNYGISSVYRSLKMKLTRMR 172
           +     K ++       D L        +           +   ++++   + +   ++ 
Sbjct: 138 QDINNRKRWKESVIIYTDKLKFDEEFAKENPIVTRRQLAEYKADMNNLKNRIFVFDQQVS 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   L+A  +  +K+L + K L ++  V + +L + +R V  +  EL  
Sbjct: 198 QKQQDLVEIKARVRNLKASYNLARKELDITKPLADEGVVPRIELLKLQRQVNDTKRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   I E           +  E    L   Q   +        L+    +  +
Sbjct: 258 TELKIPVLTSAIQETVLNRIDAALKFRSEQQEKLNTTQDKLSALTESQVGLKDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           LSP+ GTI      +     Q    L++IVP      I AK+ P+ I  ++ G +A V+F
Sbjct: 318 LSPVTGTIKKIYINTVGGVIQPGMDLIEIVPTEDTLLIEAKIAPQDIAFLRPGLSAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPA 411
             Y   R    K  +E I     Q +       +Y V ++ +     +     +  G   
Sbjct: 378 SAYDFTRYGGLKGTLEHISADTIQDEE---GNSFYLVRVRTSQEDLEEKTQFNIIPGMTT 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKI 437
            V       ++   ++ PI       
Sbjct: 435 TVDIITGKRSILDYLVKPIVQAKGSA 460


>gi|88658225|ref|YP_507757.1| HlyD family type I secretion membrane fusion protein [Ehrlichia
           chaffeensis str. Arkansas]
 gi|88599682|gb|ABD45151.1| type I secretion membrane fusion protein, HlyD family [Ehrlichia
           chaffeensis str. Arkansas]
          Length = 505

 Score =  338 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 84/444 (18%), Positives = 168/444 (37%), Gaps = 31/444 (6%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + +L   GI G+  WS + P++ SV + GE++       I+    GII K  V+
Sbjct: 71  PLFTGFIIILLFFGIFGI--WSAVAPLDGSVIAQGEVIPSSEKQIIQHLEGGIINKILVK 128

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKA 130
            G  + +  P+++  +      +D+ K  + +L      +   K   + L     +   +
Sbjct: 129 EGELVQKNQPIISLHNTTAKANLDIIKERVLDLLATEARLVAIKYNYESLIFPDTLKNLS 188

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            E    Q++           ++F     +V   + +   R++ ++     L  + +    
Sbjct: 189 DEKTRIQII-------KNQQQLFESHKKNVSGQIDILQQRIKQLHQELSGLSAQLTSAIT 241

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                 ++L   K+L E   +S+  +   ER   +S  ++ +      ++ + I E   E
Sbjct: 242 QHKLINEELETKKSLLENGYISKPYIIALERQYAESKGKIGQIKSAIASVNQKIGENKLE 301

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                 N   +I+ +L+       D   K+   +   ++  I SP AG I   +  +   
Sbjct: 302 IINITNNVQNKINLELKDVTSAITDLKEKMKTAQDILDRTIIRSPQAGIITGLKYHTEGG 361

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPHY 355
                 P+  +VP +    I AK+  + I+ +                 G  A VR   Y
Sbjct: 362 VIPPGAPITNVVPLNDDLIIDAKIQTRHIEEILSAQMKDKNIVSYENYHGLKAKVRLSAY 421

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVL 414
              +      I+ ++      + N      YY++ + I  + +    N++L  G PAEV 
Sbjct: 422 NIRKIGLVNGIVVQVSADALSEVN---GMRYYKIQVIIPKEQSAKLKNLKLYPGMPAEVF 478

Query: 415 FTAKNTTLAQEIIHPITDNWPKIF 438
              ++ TL   +  PIT  + K F
Sbjct: 479 IITQSRTLFNYLFTPITSTFEKAF 502


>gi|300724810|ref|YP_003714135.1| Alkaline protease secretion protein aprE [Xenorhabdus nematophila
           ATCC 19061]
 gi|297631352|emb|CBJ92047.1| Alkaline protease secretion protein aprE [Xenorhabdus nematophila
           ATCC 19061]
          Length = 445

 Score =  338 bits (868), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 76/429 (17%), Positives = 174/429 (40%), Gaps = 13/429 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L  +    L+   L+  IGI+G + W+   P++  V+SSG ++ + N   ++SP +GII+
Sbjct: 18  LPLDANRYLRTGWLIIGIGILGFLIWAAFAPLDKGVASSGMVVVDGNRKTVQSPANGIIR 77

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYD 125
           + QV+ G Q+  G  L+    ++    ID  K  +         +  E+  +D +     
Sbjct: 78  QIQVKEGQQVKAGQVLVQLSQVQVNAQIDSFKQQLYTTLATEARLLAEQQGIDDIVFPSA 137

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +L +  E R    L    +  ++  ++    ++ + ++ +    +++ +   R+  + + 
Sbjct: 138 LLNQQSEPRINDTLALQKQLFASRREMLRSDLAGMRQAEEGLNFQIKGLREARVSKQQQQ 197

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           S L+       + +  ++ L E+    +N   +  R   + +  L E       + +   
Sbjct: 198 SSLK-------EQIANLRPLTEEGYFPRNRYLELLRSQSELSGSLAEMTGRMGQLEKQQQ 250

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E         A+Y +E+   L   Q    +  +KL   +      +I++P+ G++V    
Sbjct: 251 ETQQRVIQRQADYQREVRTQLADVQVLANELRNKLEAAQFDLSHTSIIAPVEGSVVGLTV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           F+        + LM+I+P      + A++    I  +  G    + F  +   R  K   
Sbjct: 311 FTQGGVVASGEKLMEILPAQSALEVEARLMVHLIDKIAVGQDVDLMFTAFNQSRTPKVTG 370

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  +     +  + +  + YY++ L++          + ++ G P EV     + +L  
Sbjct: 371 KVTVVSAD--RLVDGITREPYYQMRLRVAPEGMEKLAGLNIKPGMPVEVFVKTGSRSLLS 428

Query: 425 EIIHPITDN 433
            +  P+ D 
Sbjct: 429 YLFKPLMDR 437


>gi|188582107|ref|YP_001925552.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium populi BJ001]
 gi|179345605|gb|ACB81017.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium populi BJ001]
          Length = 455

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 73/429 (17%), Positives = 165/429 (38%), Gaps = 12/429 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             L     LS+  + G+  W+    I  +V + G+++ E +V +++ P  G++ +     
Sbjct: 33  RHLAVALGLSVALVFGVGGWATFTDISAAVIAPGQLVVETDVKKVQHPTGGVVGELLARE 92

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAF 131
           G ++  G  L+  ++ +T   +D+   ++  L   R   + E+  L  +    D++ +  
Sbjct: 93  GQRVAAGDVLIRLDETQTRANLDIVLKAMDELSARRARDEAERDGLKTITFPPDLVARID 152

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                     + +     S++F   ++           R+  +      L  +++     
Sbjct: 153 TDPT------VARLIDGESRLFAARVAGREGQKAQLRERVDQLRQEIAGLTKQAAAKDRE 206

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           ++    +LT +++L+ KN V  + +   ER   +   E  + +    +    I E   + 
Sbjct: 207 INLIGHELTGVRDLYAKNLVPLSRVTALERDAARLEGERGQLVASTASARGKIAETELQI 266

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                    E+ +DL + +  +++   K    E   ++  + +P  G +      +    
Sbjct: 267 IQIDGEMRTEVGKDLAEIRGKWSELREKRVAAEDQLKRVELRAPQDGFVHQMSVHTVGGL 326

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S+P M IVP S    +  +V P+ I +V+ G  A +RF  +      +    + ++ 
Sbjct: 327 VVPSEPAMLIVPASDQLLVEVRVQPQDIDNVRVGQKAVLRFAAFNTRTTPEIDGEVVRVS 386

Query: 372 PIISQQDNNLQTQEYYEVILKI-TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             ++Q       Q YY   ++I  D       + L  G P E        ++   +  P+
Sbjct: 387 ADVTQD--PKTGQSYYTARIRIREDQKERLKGLRLVPGMPVESFTQIGERSVLSYLTKPL 444

Query: 431 TDNWPKIFE 439
           TD   K + 
Sbjct: 445 TDQIAKAWR 453


>gi|2062126|emb|CAA73293.1| prsE [Rhizobium leguminosarum]
          Length = 435

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 79/435 (18%), Positives = 164/435 (37%), Gaps = 13/435 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR+    +  +  LSI  + G+  W+    +  +V   G I+ + +V +++    GI+ +
Sbjct: 9   KRSLNRHVAVVGALSIALVCGIGGWAATTELSSAVIGEGVIVVDGDVKKVQHLTGGIVSE 68

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV 126
             V     +  G  L+  +   T   + + + ++  L   R  +  E+   D    + ++
Sbjct: 69  LLVAENDHVTAGQVLIRLDGTTTRANLSIVESTLAQLYARRARLKAERIGADSFEVEENI 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +    +   +LLD          K+F+   +++        +R   +      L  + +
Sbjct: 129 TDLTSSTSAAKLLD-------GEQKLFDSRRTALIGMKSQLASRKDQLAEQVKGLVVQIN 181

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L   +++L  +  L++K  V+   LN  +R          + I  +        E
Sbjct: 182 ATSDALGLIEQELEGIDTLYKKGLVTLQRLNTLKRARADLQGNSGQEIASKAEAEGKAIE 241

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  ++     +   EI++DL   +   A+   +         +  I +P+ G +      
Sbjct: 242 IDRQSIQLDEDRRSEIAKDLTDVEAQIAEYEERRGTALDQLHRLDITAPLTGRVHELSVH 301

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           + +      Q LM +VP +    + AKV  + I  V  G +  VRF  +           
Sbjct: 302 TVNGVIDPGQTLMLVVPENNELTVEAKVATRDIDQVHVGQSVDVRFSAFDQRTTPDVSGE 361

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           I  I P I + +       YY + +K    + +    I+L  G PAEV     + T+   
Sbjct: 362 ITSIAPDIVKDERT--GISYYPLRVKPKAESIARMKTIKLYPGMPAEVFIKIGDRTVISY 419

Query: 426 IIHPITDNWPKIFER 440
           +  P+TD    +F +
Sbjct: 420 LTKPLTDQMQHVFRQ 434


>gi|330958201|gb|EGH58461.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 445

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 75/444 (16%), Positives = 165/444 (37%), Gaps = 17/444 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           +H++    +R     ++   +L + G      W+ L P++  ++  G ++       ++S
Sbjct: 7   NHYVVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQS 66

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALD 118
              G++ K  V  G  + +G PL   +  +    +   +   +          +E+  L 
Sbjct: 67  LDGGVVSKILVSEGQLVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLH 126

Query: 119 FLNNKYDVLE----KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
            +N   +++     +  + R   +L+ L +  S+  +      S +  S++    +++ +
Sbjct: 127 EINFPAELIAAGQGQDPDPRLALVLEGLRQLFSSRRQALAREQSGLQASIEGAGLQLKGM 186

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              RLDL+ ++  LR  LS        ++ L +   +  N L + +R + +   +L +N 
Sbjct: 187 RRARLDLQAQADSLRQQLS-------NLQPLAQNGFIPSNRLLEFQRQLSQVQQDLAQNA 239

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E   + + I E       +   Y KE+       Q        +L     + +   IL+
Sbjct: 240 GETGRIEQSIIESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILA 299

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P  G  V     +     +  + L++IVP      +  ++  + I  V       + F  
Sbjct: 300 PADGIAVNLGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTA 359

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEV 413
           +   R  +    +  I     Q +     Q YY +   + D A    N + ++ G PAE+
Sbjct: 360 FNQSRTPRVSGEVSLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEM 417

Query: 414 LFTAKNTTLAQEIIHPITDNWPKI 437
                  +L   +  P+ D     
Sbjct: 418 FVRTGERSLLNYLFKPLLDRAGSA 441


>gi|59714351|ref|YP_207126.1| putative RTX transport membrane fusion protein RtxD [Vibrio
           fischeri ES114]
 gi|59482599|gb|AAW88238.1| putative RTX transport membrane fusion protein RtxD [Vibrio
           fischeri ES114]
          Length = 463

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 74/446 (16%), Positives = 162/446 (36%), Gaps = 14/446 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P + K +  + ++     I W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPTNAKILLWVIVVFFGIAIGWASWAEIDKVTVGQGKVIPSSQLQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V+ G Q+ +G  LL  +D         +K  + NL        +++D +  
Sbjct: 78  EGGLVKEMLVKEGDQVEKGQQLLLIDDTRFRSDFRERKKQLINLTASAQQLAASMDSILI 137

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSK----------VFNYGISSVYRSLKMKLTRMR 172
           +     K ++       D L    +   +           +   ++++   + +   ++ 
Sbjct: 138 QDINNRKRWKESVIVYTDKLKFDEAFVKENPIVTRRQLAEYKADMNNLKNRIFVFDQQVS 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   L+A  +  +K+L + K L ++  V + +L + +R V  +  EL  
Sbjct: 198 QKQQDLVEIKARVRNLKASYNLARKELDITKPLADEGVVPRIELLKLQRQVNDTKRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +   I E           +  E    L   Q   +        L+    +  +
Sbjct: 258 TELKIPVLTSAIQETVLNRIDAALKFRSEQQEKLNTTQDKLSALTESQVGLKDRVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           LSP+ GTI      +     Q    L++IVP      I AK+ P+ I  ++ G +A V+F
Sbjct: 318 LSPVTGTIKKIYINTVGGVIQPGMDLIEIVPTEDTLLIEAKIAPQDIAFLRPGLSAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPA 411
             Y   R    K  +E I     Q +       +Y V ++ +     +     +  G   
Sbjct: 378 SAYDFTRYGGLKGTLEHISADTIQDEE---GNSFYLVRVRTSQEDLEEKTQFNIIPGMTT 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKI 437
            V       ++   ++ PI       
Sbjct: 435 TVDIITGKRSILDYLVKPIVQAKGSA 460


>gi|113968726|ref|YP_732519.1| HlyD family type I secretion membrane fusion protein [Shewanella
           sp. MR-4]
 gi|114049131|ref|YP_739681.1| HlyD family type I secretion membrane fusion protein [Shewanella
           sp. MR-7]
 gi|113883410|gb|ABI37462.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           sp. MR-4]
 gi|113890573|gb|ABI44624.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           sp. MR-7]
          Length = 460

 Score =  338 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 170/448 (37%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P+  + +       ++  + W+    ++   + SG+++    V  I+
Sbjct: 12  MVDDVYGAMMTDAPSGHRLIIWALAAMVVCFLLWAGFAQLDKVTTGSGKVIPSSQVQVIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI+++  V  G  + +G PL+  +D         ++  +  L+ ++   ++ LD +
Sbjct: 72  SLDGGIMQELYVREGDIVTKGQPLVRIDDTRFRSDFAQQEQEVFGLKTNVIRMRAELDSI 131

Query: 121 NNKYDVLEKAFESR--------EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  +   + +         E L +          + +N  + ++   L++ + +++
Sbjct: 132 LISDMTSDWREQVKITKKALVFPESLTEAEPALVKRQQEEYNGRLDNLSNQLEILVRQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  DL +K++ L   +    ++L + + L +K  V + +L + ER V  +  EL  
Sbjct: 192 QRQQEIDDLASKTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLERAVNDAQGELNS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +   ++E   +       Y  ++   L + Q   +         +    +  I
Sbjct: 252 LRLLRPKLKAALDEAILKRREAVFVYAADLRAQLNETQTRLSRMNEAQVGAQDKVSKAII 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GTI      +     Q    +++IVP      I  K+ PK I  +  G  A V+ 
Sbjct: 312 TSPVNGTIKSVHINTLGGVVQPGVDIVEIVPSEDQLLIETKILPKDIAFLHTGLPAVVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R    K  +E I    SQ +       +Y + ++  + +   ++   + +  G 
Sbjct: 372 TAYDFTRYGGLKGTVEHISADTSQDEE---GNSFYLIKVRTEESSLVKDDGTQMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTTVDVITGQRSILEYILNPILRAKDTA 456


>gi|241205917|ref|YP_002977013.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240859807|gb|ACS57474.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 435

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 79/435 (18%), Positives = 165/435 (37%), Gaps = 13/435 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR+    +  + +LSI  + G+  W+    +  +V   G I+ + +V +++    GI+ +
Sbjct: 9   KRSLNRHVAVVGVLSIALVCGIGGWAATTELSSAVIGEGVIVVDGDVKKVQHLTGGIVSE 68

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV 126
             V     +  G  L+  +   T   + + + ++  L   R  +  E+   D    + ++
Sbjct: 69  LLVSENDHVTAGQVLIRLDGTTTRANLSIVESTLAQLYARRARLKAERIGADSFEVEENI 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +    +   +LLD          K+F+   +++        +R   +      L  + +
Sbjct: 129 SDLTSSTSAAKLLD-------GEQKLFDSRRTALIGMKSQLASRKDQLGEQVKGLVVQIN 181

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L   +++L  +  L++K  V+   LN  +R          + I  +        E
Sbjct: 182 ATNDALGLIEQELEGIDTLYKKGLVTLQRLNTLKRARADLQGNSGQEIAAKAEAEGKAIE 241

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  ++     +   EI++DL   +   A+   +         +  I +P+ G +      
Sbjct: 242 IDRQSIQLDEDRRSEIAKDLTDVEAQIAEYEERRGTALDQLHRLDITAPLTGRVHELSVH 301

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           + +      Q LM +VP +    + AKV  + I  V  G +  VRF  +           
Sbjct: 302 TVNGVIDPGQTLMLVVPENNELMVEAKVATRDIDQVHVGQSVDVRFSAFDQRTTPDVSGE 361

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           I  I P I + +       YY + +K    + +    I+L  G PAEV     + T+   
Sbjct: 362 ITSIAPDIVKDERT--GISYYPLRVKPKAESIARMKTIKLYPGMPAEVFIKIGDRTVISY 419

Query: 426 IIHPITDNWPKIFER 440
           +  P+TD    +F +
Sbjct: 420 LTKPLTDQMQHVFRQ 434


>gi|116253399|ref|YP_769237.1| HlyD family secretion protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|15007262|gb|AAK77319.1| putative protein transporter PrsE [Rhizobium leguminosarum bv.
           viciae]
 gi|115258047|emb|CAK09146.1| HlyD family secretion protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 435

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 80/435 (18%), Positives = 166/435 (38%), Gaps = 13/435 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR+    +  + +LSI  + G+  W+    +  +V   G I+ + +V +++    GI+ +
Sbjct: 9   KRSLNRHVAAVGVLSIALVCGIGGWAATTELSSAVIGEGVIVVDGDVKKVQHLTGGIVSE 68

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV 126
             V     +  G  L+  +   T   + + + ++  L   R  +  E+   D    + ++
Sbjct: 69  LLVSENDHVTAGQVLIRLDGTTTRANLSIVESTLAQLYARRARLKAERIGADSFEVEENI 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +    +  E+LLD          K+F+   +++        +R   +      L  + +
Sbjct: 129 RDLTSSTSAEKLLD-------GEQKLFDSRRTALIGMKSQLASRKDQLGEQVKGLVVQIN 181

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L   +++L  +  L++K  V+   LN  +R          + I  +        E
Sbjct: 182 ATNDALGLIEQELEGIDTLYKKGLVTLQRLNTLKRARADLQGNSGQEIAAKAEAEGKAIE 241

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  ++     +   EI++DL   +   A+   +         +  I +P+ G +      
Sbjct: 242 IDRQSIQLDEDRRSEIAKDLTDVEAQIAEYEERRGTAVDQLHRLDITAPLTGRVHELSVH 301

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           + +      Q LM +VP +    + AKV  + I  V  G +  VRF  +           
Sbjct: 302 TVNGVIDPGQTLMLVVPENNELTVEAKVATRDIDQVHVGQSVDVRFSAFDQRTTPDVAGE 361

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           I  I P I + +       YY + +K    + +    I+L  G PAEV     + T+   
Sbjct: 362 ITSIAPDIVKDERT--GISYYPLRVKPKAESIAKLKTIKLYPGMPAEVFIKIGDRTVISY 419

Query: 426 IIHPITDNWPKIFER 440
           +  P+TD    +F +
Sbjct: 420 LTKPLTDQMQHVFRQ 434


>gi|163852159|ref|YP_001640202.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium extorquens PA1]
 gi|218530917|ref|YP_002421733.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium chloromethanicum CM4]
 gi|254561905|ref|YP_003069000.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens DM4]
 gi|163663764|gb|ABY31131.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens PA1]
 gi|218523220|gb|ACK83805.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium chloromethanicum CM4]
 gi|254269183|emb|CAX25149.1| putative type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens DM4]
          Length = 448

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 70/421 (16%), Positives = 164/421 (38%), Gaps = 12/421 (2%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           LS   ++G+  W+    I  +V + G+++ E +V +++ P  G++ +     G ++  G 
Sbjct: 34  LSAALVLGVGGWATFTEISAAVIAPGQLVVETDVKKVQHPTGGVVGQLLAREGQRVAAGD 93

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLL 139
            L+  ++ +T   +D+   ++  L       + E+  L  +    D++ +  +       
Sbjct: 94  VLIRLDETQTRANLDIVLKAMDELSARGARDEAERDGLKTITFPPDLVARINDDP----- 148

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             + +     S++F   ++           R+  +      L  +++     ++    +L
Sbjct: 149 -SVARLIDGESRLFASRVAGREGQRAQLRERVEQLRQEIAGLTKQAAAKDREINLIGHEL 207

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +++L+ KN V  + +   ER   +   E  + +    +    I E   +     +   
Sbjct: 208 GGVRDLYAKNLVPLSRVTALERDAARLEGERGQLVASTASARGKIAETELQIIQIDSEMR 267

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E+ +DL + +  +++   K    E   ++  + +P  G +      +       S+P M
Sbjct: 268 TEVGKDLAEIRGKWSELREKRVAAEDQLKRVELRAPQDGFVHQMSVHTVGGLVTPSEPAM 327

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IVP S    +  +V P+ I +V+ G  A +RF  +      +    + ++   ++Q   
Sbjct: 328 LIVPASDQLLVEVRVQPQDIDNVRVGQKAVLRFAAFNTRTTPEIDGEVVRVSADVTQDVK 387

Query: 380 NLQTQEYYEVILKI-TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               Q YY   ++I  D       + L  G P E        ++   +  P+TD   K +
Sbjct: 388 T--GQSYYTARIRIREDQKERLKGLRLVPGMPVESFTQIGERSVLSYLTKPLTDQIAKAW 445

Query: 439 E 439
            
Sbjct: 446 R 446


>gi|6624216|dbj|BAA88493.1| membrane fusion protein [Pseudomonas fluorescens]
          Length = 443

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 64/429 (14%), Positives = 158/429 (36%), Gaps = 16/429 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L  +     +   LL + G  G + W+ L P++  V+ SG+++   +   ++ P  GI++
Sbjct: 19  LALDDKKYARLGWLLVLGGFAGFLGWAALAPLDKGVAVSGKVMVSGHRKTVQHPSGGIVE 78

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYD 125
           + +V +G  +  G  L+  ++      +   +      +     +  E   L  +    +
Sbjct: 79  RIEVRDGEVVSAGQVLIHLKETPLRGQMQSLRSQFIASQASEARLSAESEGLSAVVFGPE 138

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +L    E      L    +  S+ ++        +  ++     ++R    ++     + 
Sbjct: 139 LLN---EPEAAATLSLQRQLFSSRAQALATEQQGLRETIAGAEAQLRGTRESQASKVLQR 195

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           + +        + L  ++ L     + +N L + ER+  +    + E+      + R + 
Sbjct: 196 TAM-------NEQLQGLRELARDGYIPRNRLLENERLYAQLDGAIAEDFGRIGQLQRQVL 248

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           EL         ++ K++   L + +    D  ++L   E         +P AG +V    
Sbjct: 249 ELRLRIRQLGEDFQKDLRGQLAETRTRSDDLRNRLASAEFELANSLARAPAAGVVVGLDV 308

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           ++     +  Q LM IVP  +   + A+V  + +  V  G    + F  +      +   
Sbjct: 309 YTEGGVIKPGQALMDIVPQGEPLLVEARVPVQMVDKVHPGLPVELLFSAFNQSTTPRIAG 368

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  +     +Q +    + YY +  +++       + +++R G P E        ++  
Sbjct: 369 EVTLVSAD--RQVDERTDEPYYTLRAQVSAAGMRQLDGLQIRPGMPVEAFVKTGERSMLN 426

Query: 425 EIIHPITDN 433
            +  P+ D 
Sbjct: 427 YLFKPLLDR 435


>gi|312883032|ref|ZP_07742763.1| HlyD family secretion protein [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369192|gb|EFP96713.1| HlyD family secretion protein [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 463

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 67/448 (14%), Positives = 161/448 (35%), Gaps = 14/448 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P S + +  + +   I    W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPNSAQILLWVVVAFFILAAIWASWAEIDKVTVGEGKVVPSSQIQVVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++K+  V+ G Q+ +G  LL  +D         ++  I NL   +    +++  +  
Sbjct: 78  EGGLVKEILVKEGQQVEKGQRLLLIDDTRFRSDYREREQQIANLTASVLRLSTSISSVVI 137

Query: 123 KYDVLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           +    E  +E          S  E  ++         +  +   +  +   + +   +++
Sbjct: 138 REKFDEANWEDSVAITINELSFPESFIEKQTTLIDRQNAEYRQNLKELINQMSLMSQQVK 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + ++++ +   LR      +K+L +   L ++  V Q +L + +R V  +  EL  
Sbjct: 198 QKQQDLVEIQARVQNLRESYKFAKKELEITIPLADEGIVPQIELLKLQRQVNDTRRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +   +   I E           +  E    L   Q   +        L+    +  +
Sbjct: 258 SQLKVPVLKSAIRETILSRIDTAQQFRSEQQEKLNSAQDQLSSLNKSTIGLQDKVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GTI      +     Q    +++IVP      I A++ P+ I  ++      V+F
Sbjct: 318 TSPVTGTIKTLNINTVGGVIQPGMDIVEIVPSEDTLLIEARIAPQDIAFLRPDLHTIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN-IELRNGFPA 411
             Y   +    +  +E I    +  +       +Y V ++  + + + +  + +  G   
Sbjct: 378 SAYDFTKYGGLEGTLEHISADTTTDEE---GNSFYLVRVRTKETSLNKDKLLPIIPGMTT 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V       T+ + ++ PI +      +
Sbjct: 435 SVDIITGKRTIMEYLLKPILNAQSNALK 462


>gi|146340900|ref|YP_001205948.1| HlyD family secretion protein [Bradyrhizobium sp. ORS278]
 gi|146193706|emb|CAL77723.1| putative secretion protein (HlyD family); putative toxin/protease
           secretion system [Bradyrhizobium sp. ORS278]
          Length = 644

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 74/417 (17%), Positives = 160/417 (38%), Gaps = 14/417 (3%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
             + G   W  L+P+  +V   G ++ + NV  I+ P  GII + +V+NG ++  G  L+
Sbjct: 236 AAVFG-GGWLTLVPLAGAVVVPGNLVVQSNVKAIQHPTGGIIAEIKVDNGKRVAAGDLLV 294

Query: 86  TFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
             +  ++   +      +   R     +  E+  L+       +     +     ++   
Sbjct: 295 RLDATQSQAQLQSITKQLNEQRAKIARLSAERDGLEQPEYPATLTSHTDDPNIRAVI--- 351

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
               ++ + +F     +     ++   R+  +      +E +       +   + +L  +
Sbjct: 352 ----ASENALFKARAVTRKSQKELLQGRIVQLNNEISGMEAQLDSKTKQIDLIKGELAGV 407

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           ++L++K  V    L   +R   +   E  + +         I+E   +      ++  E+
Sbjct: 408 QDLYDKRLVPLTRLTTLQREAARIDGERGQLVSSVAETRSKISEAELQTVKIDQDFRSEV 467

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
            +DL ++Q    D + K        ++  + +P +GTI      +     +  + +M++V
Sbjct: 468 VKDLSESQAKEGDLVEKGVAARDQLDRIEMRAPNSGTIHQLAVHTIGGVIKPGETIMELV 527

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P S    +   V PK I HV  G  A V F  +      K    +  + P I+       
Sbjct: 528 PDSDELQVEGHVQPKDIDHVHTGQDAMVHFNAFNSHTTPKLSGQVSFVSPDITNDQRTGS 587

Query: 383 TQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           T  +Y V + + D       ++ L+ G  AEV     + T+   ++ P+ D W + F
Sbjct: 588 T--FYTVRITLPDEERKRLGDVNLKPGMQAEVYVQTGSRTMLSYLMKPVLDQWRRAF 642


>gi|237729714|ref|ZP_04560195.1| HlyD family secretion protein [Citrobacter sp. 30_2]
 gi|226908320|gb|EEH94238.1| HlyD family secretion protein [Citrobacter sp. 30_2]
          Length = 457

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 71/430 (16%), Positives = 158/430 (36%), Gaps = 15/430 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + + + +  + P  ++    + +  +     W+    I+      G+ +    + +I++ 
Sbjct: 30  NEVSQAIIDDAPRVIRLTLWVILALVALSFIWAGFAKIDEVTRGEGKAIPSSKLQKIQNL 89

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GI+ +  V  G  +  GTPLL  +D      +   +     LR  ++   + ++  + 
Sbjct: 90  EGGIVTELYVHEGQIVNAGTPLLHLDDTRFASNVGETEADKLGLRAKVERLTAEVENRDF 149

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              V+     S+  ++     + +++  + F+  IS +   L  K   +R       D E
Sbjct: 150 ---VISPEIASQAPEVARGETELYNSRREQFHNEISGLEEQLVQKKQELR-------DFE 199

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           +K    +  L   ++++ M + L    A+S+ +L +  R   ++  +L            
Sbjct: 200 SKEDQFKHSLGLIRQEIKMSEPLLASGAISKVELLRLRRTEVETAGQLNSISLSLPKATS 259

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I E+ ++       +  +    L + +   +   + +  LE    +  + SP+ G +  
Sbjct: 260 EIKEIENKIGESRGRFQSDALAQLNEARTNLSKTQASVKALEDRVNRTMVTSPVRGIVQQ 319

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +     Q    L++IVP      I AK+ P+ I  +  G  A V+F  Y       
Sbjct: 320 VMVNTIGGVIQPGSDLVEIVPLDDKLLIEAKIQPRDIAFLHPGQHAMVKFTAYDYTIYGG 379

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNT 420
            +  + +I P         Q + +Y V L+              +  G  A V       
Sbjct: 380 LQGEVVQISPDTVTD---KQGRSFYIVRLQTDKNYLGTKEHPMLIIPGMVASVDILTGKK 436

Query: 421 TLAQEIIHPI 430
           T+   ++ PI
Sbjct: 437 TILSYLLKPI 446


>gi|240139491|ref|YP_002963966.1| putative type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens AM1]
 gi|240009463|gb|ACS40689.1| putative type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens AM1]
          Length = 448

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 71/429 (16%), Positives = 166/429 (38%), Gaps = 12/429 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           + L     LS   ++G+  W+    I  +V + G+++ E +V +++ P  G++ +     
Sbjct: 26  SHLTVAIGLSAALVLGVGGWATFTEISAAVIAPGQLVVETDVKKVQHPTGGVVGQLLARE 85

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAF 131
           G ++  G  L+  ++ +T   +D+   ++  L       + E+  L  +    D++ +  
Sbjct: 86  GQRVAAGDVLIRLDETQTRANLDIVLKAMDELAARGARDEAERDGLKTITFPPDLVARIN 145

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +         + +     S++F   ++           R+  +      L  +++     
Sbjct: 146 DDP------SVARLIDGESRLFASRVAGREGQRAQLRERVEQLRQEIAGLTKQAAAKDRE 199

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           ++    +L  +++L+ KN V  + +   ER   +   E  + +    +    I E   + 
Sbjct: 200 INLIGHELGGVRDLYAKNLVPLSRVTALERDAARLEGERGQLVASTASARGKIAETELQI 259

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               +    E+ +DL + +  +++   K    E   ++  + +P  G +      +    
Sbjct: 260 IQIDSEMRTEVGKDLAEIRGKWSELREKRVAAEDQLKRVELRAPQDGFVHQMSVHTVGGL 319

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S+P M IVP S    +  +V P+ I +V+ G  A +RF  +      +    + ++ 
Sbjct: 320 VTPSEPAMLIVPASDQLLVEVRVQPQDIDNVRVGQKAVLRFAAFNTRTTPEIDGEVVRVS 379

Query: 372 PIISQQDNNLQTQEYYEVILKI-TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             ++Q       Q YY   ++I  D       + L  G P E        ++   +  P+
Sbjct: 380 ADVTQDVKT--GQSYYTARIRIREDQKERLKGLRLVPGMPVESFTQIGERSVLSYLTKPL 437

Query: 431 TDNWPKIFE 439
           TD   K + 
Sbjct: 438 TDQIAKAWR 446


>gi|146294676|ref|YP_001185100.1| HlyD family type I secretion membrane fusion protein [Shewanella
           putrefaciens CN-32]
 gi|145566366|gb|ABP77301.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           putrefaciens CN-32]
 gi|319427912|gb|ADV55986.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           putrefaciens 200]
          Length = 460

 Score =  336 bits (862), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 169/448 (37%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P   + +       I+  + W+    ++   + SG+++    V  I+
Sbjct: 12  MVDDVYGAMMTDAPTGHRLIIWAMAAMIVCFLLWAAFAKLDKVTTGSGKVIPSSQVQVIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI+++  V  G  + +G PL+  +D         ++  +  L+ +    ++ LD +
Sbjct: 72  SLDGGIMQELYVREGELVTKGQPLVRIDDTRFRSDFAQQEQEVFGLKTNAIRMRAELDSI 131

Query: 121 N--------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                     +  ++ K      + ++           + +N  + ++   L++ + +++
Sbjct: 132 LISDMTSDWREQVLITKKALVFPDSIVAAEPALVHRQQEEYNGRLDNLSNQLEILVRQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +L +K++ L   +    ++L + + L +K  V + +L + ER V  +  EL  
Sbjct: 192 QRQQEIDELASKTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLERAVNDAQGELNS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +   ++E   +       Y  ++   L + Q   +         +    +  I
Sbjct: 252 LRLLRPKLKSALDEAILKRREAVFVYAADLRAQLNETQTRLSRMNEAQVGAQDKVSKAII 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GTI      +     Q    +++IVP      I  KV PK I  +  G  A V+ 
Sbjct: 312 TSPVNGTIKTTHINTLGGVVQPGVNIIEIVPSEDQLLIETKVLPKDIAFLHPGLPAIVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R    K  +E I    SQ +       +Y + ++  + +   ++   + +  G 
Sbjct: 372 TAYDFTRYGGLKGTVEHISADTSQDEE---GNSFYLIRVRTEESSLVKDDGTQMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTTVDVITGQRSILEYILNPILRAKDTA 456


>gi|152986009|ref|YP_001349499.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           PA7]
 gi|150961167|gb|ABR83192.1| alkaline protease secretion protein AprE [Pseudomonas aeruginosa
           PA7]
          Length = 432

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 73/437 (16%), Positives = 152/437 (34%), Gaps = 13/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +  KR+  A  +   LL + G  G + W+   P++  V+    ++       ++ P  
Sbjct: 1   MTRMAKRDENAYARMGWLLVLFGFGGALLWAAFAPLDQGVAVPATVIISGQRKSVQHPVG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLN 121
           G++K   V +G ++  G PL+  E  +    +D       N R     +  E   L  L 
Sbjct: 61  GVVKHILVRDGQRVEAGEPLIRLEPTQAQANVDSLVNQYVNARLNQARLQAEYDGLHTLE 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               +  +A  +        LG+      ++     +++   L      +  +      L
Sbjct: 121 MPTGLAGQAPVA-------SLGERLELQRQLLRSRQTALGNELSALRANIEGLRAQLEGL 173

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                  R         L+  ++L E+  + +N L +QER + +    L E+      + 
Sbjct: 174 RQTEQNQRLQQRLLNSQLSGARDLAEEGYMPRNQLLEQERQLAEVNARLSESSGRFGQIR 233

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           + I E           Y KE+S  L + Q        +L+      +   I +P+ G + 
Sbjct: 234 QSIAEAQMRIGQRQEEYRKEVSGQLAETQVNARTLWEELSSARYELQHAEIRAPVGGYVA 293

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F+        + LM IVP+S    +  ++    +  +  G    + F  +   +  
Sbjct: 294 GLKVFTEGGVIGPGELLMYIVPNSDSLEVEGQLAVNLVDRIHSGLPVEMLFTAFNQSKTP 353

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
           +    +  +       + N   Q YY +  ++          +++R G   +V       
Sbjct: 354 RVTGEVTMVSADRLLDEQNK--QPYYALRAQVDAAGMGKLQGLQIRPGMAVQVFVRTGER 411

Query: 421 TLAQEIIHPITDNWPKI 437
           +L   +  P+ D     
Sbjct: 412 SLLNYLFKPLLDRAHVA 428


>gi|120600518|ref|YP_965092.1| HlyD family type I secretion membrane fusion protein [Shewanella
           sp. W3-18-1]
 gi|120560611|gb|ABM26538.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           sp. W3-18-1]
          Length = 460

 Score =  336 bits (861), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 169/448 (37%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P   + +       I+  + W+    ++   + SG+++    V  I+
Sbjct: 12  MVDDVYGAMMTDAPTGHRLIIWAMAAMIVCFLLWAAFAKLDKVTTGSGKVIPSSQVQVIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI+++  V  G  + +G PL+  +D         ++  +  L+ +    ++ LD +
Sbjct: 72  SLDGGIMQELYVREGELVTKGQPLVRIDDTRFRSDFAQQEQEVFGLKTNTIRMRAELDSI 131

Query: 121 N--------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                     +  ++ K      + ++           + +N  + ++   L++ + +++
Sbjct: 132 LISDMTSDWREQVLITKKALVFPDSIVAAEPALVHRQQEEYNGRLDNLSNQLEILVRQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +L +K++ L   +    ++L + + L +K  V + +L + ER V  +  EL  
Sbjct: 192 QRQQEIDELASKTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLERAVNDAQGELNS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +   ++E   +       Y  ++   L + Q   +         +    +  I
Sbjct: 252 LRLLRPKLKSALDEAILKRREAVFVYAADLRAQLNETQTRLSRMNEAQVGAQDKVSKAII 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GTI      +     Q    +++IVP      I  KV PK I  +  G  A V+ 
Sbjct: 312 TSPVNGTIKTTHINTLGGVVQPGVNIIEIVPSEDQLLIETKVLPKDIAFLHPGLPAIVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R    K  +E I    SQ +       +Y + ++  + +   ++   + +  G 
Sbjct: 372 TAYDFTRYGGLKGTVEHISADTSQDEE---GNSFYLIRVRTEESSLVKDDGTQMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTTVDVITGQRSILEYILNPILRAKDTA 456


>gi|220922509|ref|YP_002497811.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium nodulans ORS 2060]
 gi|219947116|gb|ACL57508.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium nodulans ORS 2060]
          Length = 446

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 68/429 (15%), Positives = 169/429 (39%), Gaps = 12/429 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             L+   LLS+  + G+  W+    I  +V + G+++ E +V +++ P  G++ + +V +
Sbjct: 24  RHLQASLLLSVALVGGVGGWAAFTQISGAVIAPGQMVVESDVKKVQHPTGGVVGELRVRD 83

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAF 131
           G ++  G  L+  ++ +T   +D+   ++  L   R   + E+     +    D+L++A 
Sbjct: 84  GDRVKAGDVLIRLDETQTRANLDIVLKALDELAARRARDEAERDGASAITFPADLLQRAR 143

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                     +       +++F   +++          R+  +      L  ++      
Sbjct: 144 TD------ATVAHLIEGETRLFTSRVNAREGQKAQLRERLAQLKQEITGLTQQAGAKERE 197

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           ++    +L  ++ L+ KN V    L   ER   +   E  + I    +    ++E+  + 
Sbjct: 198 IAFIASELKGVRELYAKNLVQLPRLTALERDAVRLEGERGQLIASTASARGKLSEIELQI 257

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                +   E+ +DL + +  +++ + K    E   ++  + +P  G +      +    
Sbjct: 258 LQIDQDMRTEVGKDLAEIRGKWSELVEKRVAAEDLLKRVELRAPQDGIVHQMTVHTIGGL 317

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              ++P M IVP +    +  K+ P+ I +V+      +RF  +      +   ++ ++ 
Sbjct: 318 VTPNEPAMLIVPSADQLAVEVKIQPQDIDNVRLDQPVVLRFAAFNQRTTPEIDGVVTRVS 377

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             +S   +      YY   + + +   +   N+ L  G P E        ++   +  P+
Sbjct: 378 ADVS--TDPKTGASYYTARISVPEEQKARLGNVRLVPGMPVESFMQLGQRSVLSYLTKPL 435

Query: 431 TDNWPKIFE 439
            D   K + 
Sbjct: 436 ADQVAKAWR 444


>gi|117918837|ref|YP_868029.1| HlyD family type I secretion membrane fusion protein [Shewanella
           sp. ANA-3]
 gi|117611169|gb|ABK46623.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           sp. ANA-3]
          Length = 460

 Score =  335 bits (860), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 171/448 (38%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P+  + +       +   + W+    ++   + SG+++    V  I+
Sbjct: 12  MVDDVYGAIMTDAPSGHRLIIWALAAMVACFLLWAGFAKLDKVTTGSGKVIPSSQVQVIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI+++  V  G  + +G PL+  +D         ++  +  L+ +    ++ LD +
Sbjct: 72  SLDGGIMQELFVREGDIVTKGQPLVRIDDTRFRSDFAQQEQEVLGLKTNAIRMRAELDSI 131

Query: 121 ---NNKYDVLEKAFESREE-----QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
              +   D  E+   +++       + +          + +N  + ++   L++ + +++
Sbjct: 132 LISDMTSDWREQVKITKKALVFPDSITEAEPALVRRQQEEYNGRLDNLSNQLEILVRQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  DL +K++ L   +    ++L + + L +K  V + +L + ER V  +  EL  
Sbjct: 192 QRQQEIDDLASKTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLERAVNDAQGELNS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +   ++E   +       Y  ++   L + Q   +         +    +  I
Sbjct: 252 LRLLRPKLKAALDEAILKRREAVFVYAADLRAQLNETQTRLSRMNEAQVGAQDKVSKAVI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GTI      +     Q    +++IVP      I  K+ PK I  +  G  A V+ 
Sbjct: 312 TSPVNGTIKTVHINTLGGVVQPGVDIIEIVPSEDQLLIETKILPKDIAFLHTGLPAVVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R    K  +E I    SQ D       +Y + ++  + +   ++   + +  G 
Sbjct: 372 TAYDFTRYGGLKGTVEHISADTSQDDE---GNSFYLIKVRTEESSLIKDDGTQMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTTVDVITGQRSILEYILNPILRAKDTA 456


>gi|131070|sp|P23597|PRTE_ERWCH RecName: Full=Proteases secretion protein prtE
 gi|41549|emb|CAA37343.1| prtE [Erwinia chrysanthemi]
 gi|148485|gb|AAA63635.1| prtE [Erwinia chrysanthemi]
          Length = 448

 Score =  335 bits (859), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 69/437 (15%), Positives = 164/437 (37%), Gaps = 13/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M     R+   +L+    L + G  G + W++L P++  V+  G ++   N   I+    
Sbjct: 17  MRDRASRDEERALRLGWWLVLAGFGGFLLWALLAPLDKGVAVQGNVVVSGNRKVIQHMQG 76

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           GI+ + QV++G ++  G  LLT   ++     + +  +   +      +  E+     L 
Sbjct: 77  GIVDRIQVKDGDRVAAGQVLLTLNAVDARTTSEGLGSQYDQLIAREARLLAEQRNQSSLA 136

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               + +         ++        +  +     I  V  S+    T + ++       
Sbjct: 137 ATPRLTQARQRPEMAAIIALQEDLLRSRQQSLKLEIDGVRASIDGLETSLGALQKVMSSK 196

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +++ + L        + L  ++ L   N V +N + + ER+  + + EL +   E     
Sbjct: 197 QSEQATL-------SQQLQGLRPLAADNYVPRNKMLETERLFAQVSGELAQTSGEVGRTR 249

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R I +           Y KE++ +L   Q    + +S+    +       + +P+AGT+V
Sbjct: 250 RDIQQQKLRIAQRQQEYDKEVNSELSDVQAKLNEVISQREKADFNLANVQVRAPVAGTVV 309

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F+        Q +M IVP  +   +  ++  + +  V  G    ++F  ++     
Sbjct: 310 DMKIFTEGGVIAPGQVMMDIVPEDQPLLVDGRIPVEMVDKVWSGLPVELQFTAFSQSTTP 369

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNT 420
           +    +  +       + +     YY + +++++    S + +E++ G P +        
Sbjct: 370 RVPGTVTLLSADRLVDEKDGT--PYYGLRIQVSEEGKRSLHGLEIKPGMPVQGFVRTGER 427

Query: 421 TLAQEIIHPITDNWPKI 437
           +    +  P+ D     
Sbjct: 428 SFINYLFKPLMDRMHLA 444


>gi|307131041|ref|YP_003883057.1| Proteases secretion protein prtE [Dickeya dadantii 3937]
 gi|306528570|gb|ADM98500.1| Proteases secretion protein prtE [Dickeya dadantii 3937]
          Length = 448

 Score =  335 bits (859), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 69/437 (15%), Positives = 164/437 (37%), Gaps = 13/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M     R+   +L+    L + G  G + W++L P++  V+  G ++   N   I+    
Sbjct: 17  MRDRASRDEERALRLGWWLVLAGFGGFLLWALLAPLDKGVAVQGNVVVSGNRKVIQHMQG 76

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           GI+ + QV++G ++  G  LLT   ++     + +  +   +      +  E+     L 
Sbjct: 77  GIVDRIQVKDGDRVAAGQVLLTLNAVDARTTSEGLGSQYDQLIAREARLLAEQRNQSSLA 136

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               + +         ++        +  +     I  V  S+    T + ++       
Sbjct: 137 ATPRLAQARQRPEMAAIIALQEDLLRSRQQSLKLEIDGVRASIDGLETSLGALQKVMSSK 196

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +++ + L        + L  ++ L   N V +N + + ER+  + + EL +   E     
Sbjct: 197 QSEQATL-------SQQLQGLRPLAADNYVPRNKMLETERLFAQVSGELAQTSGEVGRTR 249

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R I +           Y KE++ +L   Q    + +S+    +       + +P+AGT+V
Sbjct: 250 RDIQQQKLRIAQRQQEYDKEVNSELSDVQAKLNEVISQREKADFNLANVQVRAPVAGTVV 309

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F+        Q +M IVP  +   +  ++  + +  V  G    ++F  ++     
Sbjct: 310 DMKIFTEGGVIAPGQVMMDIVPEDQPLLVDGRIPVEMVDKVWSGLPVELQFTAFSQSTTP 369

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNT 420
           +    +  +       + +     YY + +++++    S + +E++ G P +        
Sbjct: 370 RVPGTVTLLSADRLVDEKDGT--PYYGLRIQVSEEGKRSLHGLEIKPGMPVQGFVRTGER 427

Query: 421 TLAQEIIHPITDNWPKI 437
           +    +  P+ D     
Sbjct: 428 SFINYLFKPLMDRMHLA 444


>gi|24375801|ref|NP_719844.1| HlyD family secretion protein [Shewanella oneidensis MR-1]
 gi|24350751|gb|AAN57288.1|AE015865_2 HlyD family secretion protein [Shewanella oneidensis MR-1]
          Length = 484

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 69/448 (15%), Positives = 169/448 (37%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P+  + +       +   + W+    ++   + SG+++    V  I+
Sbjct: 36  MVDDVYGAMMTDAPSGHRLIIWALAAMVACFLLWAGFAELDTVTTGSGKVIPSSQVQVIQ 95

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI+++  V +G  + +G PL+  +D         ++  +  L+ +    ++ LD +
Sbjct: 96  SLDGGIMQELFVRDGDLVTKGQPLVRIDDTRFRSDFAQQEQEVFGLKTNAIRMRAELDSI 155

Query: 121 NNKYDVLEKAFESR--------EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  +   + +         + ++           + ++  + ++   L++ + +++
Sbjct: 156 LISDMTSDWREQVKITKKDLVFPDSIIQAEPALVKRQQEEYSGRLDNLSNQLEILVRQIQ 215

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  DL +K++ L   +    ++L + + L +K  V + +L + ER V  +  EL  
Sbjct: 216 QRQQEIDDLASKTTTLTTSMQLISRELELTRPLAKKGIVPEVELLKLERAVNDAQGELNS 275

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +   ++E   +       Y  ++   L + Q   +         +    +  I
Sbjct: 276 LRLLRPKLKAALDEAILKRREAVFVYAADLRAQLNETQTRLSRMNEAQVGAQDKVSKAII 335

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GTI      +     Q    +++IVP      I  K+ PK I  +  G  A V+ 
Sbjct: 336 TSPVNGTIKTVHINTLGGVVQPGVDIIEIVPSEDQLLIETKILPKDIAFLHTGLPAVVKV 395

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R    K  +E I    SQ +       +Y + ++  + +   ++   + +  G 
Sbjct: 396 TAYDFTRYGGLKGTVEHISADTSQDEE---GNSFYLIKVRTEESSLIKDDGTQMPIIPGM 452

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 453 LTTVDVITGQRSILEYILNPILRAKDTA 480


>gi|271500591|ref|YP_003333616.1| type I secretion membrane fusion protein, HlyD family [Dickeya
           dadantii Ech586]
 gi|270344146|gb|ACZ76911.1| type I secretion membrane fusion protein, HlyD family [Dickeya
           dadantii Ech586]
          Length = 448

 Score =  335 bits (859), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 67/437 (15%), Positives = 168/437 (38%), Gaps = 13/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M     R+   +L+    L  +G  G + W++L P++  V+  G ++   N   I+    
Sbjct: 17  MRDRASRDEKRALRLGWWLVFVGFGGFLLWALLAPLDKGVAVQGNVVVSGNRKVIQHMQG 76

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           GI+++ QV+ G ++  G  LLT   ++     + +  +   +      +  E+     L 
Sbjct: 77  GIVERIQVKEGDRVAAGQVLLTLNAVDARTTSEGLGSQYDQLIAREARLLAEQRNQPSLV 136

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               ++E         ++        +  +        V  S++   T + ++       
Sbjct: 137 ATPRLVEARQRPEMAGIIALQENLLYSRQQALKLETEGVRASIEGMETSLGALQKVITSK 196

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +++ ++L        + L  ++ L  +N V +N + + ER+  + + EL +   +   + 
Sbjct: 197 QSEQAVL-------SQQLQGLRPLAAENYVPRNKMLEMERLFAQVSGELAQTGGDAGRIR 249

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R I +           Y +E+S +L   Q    + +S+    +       + +P+AGT+V
Sbjct: 250 RDIQQQKLRIAQRQQEYDREVSSELSDVQSKLNEVISQREKADFNLANVQVRAPVAGTVV 309

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F+        Q +M+IVP  +   +  ++  + +  V  G    ++F  ++     
Sbjct: 310 DMKVFTEGGVIAAGQVMMEIVPEDQPLLVDGRIPVEMVDKVWAGLPVELQFTAFSQSTTP 369

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNT 420
           +    +  +       + +     YY + +++++      + +E++ G P +        
Sbjct: 370 RVPGTVTLLSADRLVDEKD--GMPYYSLRIQVSEEGKRTLHGLEIKPGMPVQGFVRTGER 427

Query: 421 TLAQEIIHPITDNWPKI 437
           +    +  P+ D     
Sbjct: 428 SFINYLFKPLMDRMHLA 444


>gi|209809827|ref|YP_002265366.1| secretion protein, HlyD family [Aliivibrio salmonicida LFI1238]
 gi|208011390|emb|CAQ81855.1| secretion protein, HlyD family [Aliivibrio salmonicida LFI1238]
          Length = 463

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 78/446 (17%), Positives = 164/446 (36%), Gaps = 14/446 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  N P + K +  +  +     I W+    I+      G+++    +  +++ 
Sbjct: 18  DDKTAALLLNTPTNAKILLWIIAVFFCISIAWASWAEIDKVTVGQGKVIPSSQLQIVQNL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL-- 120
             G++K   V+ G Q+ +G  LL  +D         +K  + NL        +++D +  
Sbjct: 78  EGGLVKDMLVKEGDQVTKGQQLLLIDDTRFRSDFRERKKQLINLTASAQQLSASMDSILI 137

Query: 121 ---NNKYDVLEKAFESREEQLLDFLGKYH-----STCSKVFNYGISSVYRSLKMKLTRMR 172
              NNK    E    S ++ + D   K             +   ++++   + +   ++ 
Sbjct: 138 QDINNKKRWKESVIISNDKLVFDDEFKKENPIVAQRQMAEYRADMNNLKNRIYVFDQQVA 197

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               + L+L+++   L+      +K+L + K L ++  V + +L + +R +  +  EL  
Sbjct: 198 QKQQDLLELKSRVKNLQKGYGYARKELAITKPLADEGVVPRIELLKLQRQLNDTKRELTS 257

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   ++    E           +  E    L   Q   +        L+    +  +
Sbjct: 258 TELKIPVLISEAQETILNRIDAALKFRSEQQEKLNTIQDKLSALTESQVGLKDKVNRTVV 317

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           LSP+ GTI      +     Q    L++IVP      I AK+ P+ I  ++ G +A V+F
Sbjct: 318 LSPVTGTIKKIYINTVGGVIQPGMDLIEIVPTEDTLLIEAKIAPQDIAFLRPGLSAIVKF 377

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPA 411
             Y   R    K ++E I     Q +       +Y V ++ +    + +    +  G  A
Sbjct: 378 SAYDFTRYGGLKGVLEFISADTIQDEE---GNSFYLVRIRTSQDELAIEKQFLIIPGMTA 434

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKI 437
            V       ++   ++ PI       
Sbjct: 435 SVDVITGKRSILDYLLKPIVQAKSSA 460


>gi|269103392|ref|ZP_06156089.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163290|gb|EEZ41786.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 460

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 79/442 (17%), Positives = 169/442 (38%), Gaps = 14/442 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++K +  + P   + +  L  I +I  I+W+    ++      G+++    V  I+
Sbjct: 12  MTDDLYKAMLLDSPKQHRWVIRLFFIMVICFISWAAWAQLDQVTRGEGKVIPSSQVQMIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI+++  V  G Q+ +G PL   +D      +  +    ++L+ +I   K  +  +
Sbjct: 72  SLDGGILQELFVTEGMQVTKGQPLARIDDTRFRSDLAQQVEEEESLQANIFRLKQEIQSI 131

Query: 121 N--------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                     +   + KA     + L+    +     +  ++  +  +   + +   ++ 
Sbjct: 132 EIADANKGWKEQVRVNKAPLDFPKALVANEPELIKQQTAEYHGRLDELNNQIAILARQIV 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                   L ++   L++ L    K+L M + L  K  VS+ DL Q +R V ++  EL  
Sbjct: 192 QKQQESHGLVSQIKTLKSSLHLINKELVMTRPLARKGIVSEVDLLQLQRQVNETKGELST 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +Q  +   ++E   +       Y KE    L +     +         +   ++  I
Sbjct: 252 LYLQQPKVKAALDEAILKRREAVLTYNKEARAQLNELSARLSRLTEAQVGAQDKVDKAII 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GTI      +     Q  + +M+IVP      I  K+ PK I  +  G  A V+ 
Sbjct: 312 TSPVNGTIKMINIMTLGGVVQPGKDIMEIVPSEDQLLIEVKIAPKDIAFLHPGLPAVVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R       +  I    +Q  ++     +Y + ++  + + + ++   + +  G 
Sbjct: 372 TAYDFTRYGGLDGTVVTISADTTQDKDD---NSFYLIKVRTKESSLARSDGTLMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPIT 431
              V       ++   I++PI 
Sbjct: 429 LTSVDVITGKRSVLDYILNPIL 450


>gi|257485393|ref|ZP_05639434.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289648884|ref|ZP_06480227.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|330987905|gb|EGH86008.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. lachrymans str. M301315]
          Length = 445

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 71/439 (16%), Positives = 153/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +   +   +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQSVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           ++   +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VHFPAELIAAG---QGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S +K L+ ++ L +   +  N L + +R + +    L +N  E   
Sbjct: 185 GMRRARSDLLAQADSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      +  ++  + I  V       + F  +   R
Sbjct: 305 AVNLGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D A    N + ++ G PAE+     
Sbjct: 365 TPRVSGEVNLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|190893051|ref|YP_001979593.1| protein secretion protein, HlyD family [Rhizobium etli CIAT 652]
 gi|190698330|gb|ACE92415.1| protein secretion protein, HlyD family [Rhizobium etli CIAT 652]
          Length = 446

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 80/438 (18%), Positives = 170/438 (38%), Gaps = 10/438 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR+    +  +  LSI  + G+  W+    +  +V   G ++ + +V +I+ P  GI+ K
Sbjct: 9   KRSLNRHVAVVGALSIALVCGIGGWAATTELSSAVIGEGVVIVDGDVKKIQHPTGGIVSK 68

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV 126
             V     +  G  L+  +   T   + + + ++  L   R  +  E+   D    + ++
Sbjct: 69  LLVAENDHVSAGQVLIRLDGTSTRAQLSIVESTLAQLYARRARLKAERIGADSFEVEENI 128

Query: 127 LE----KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            +     A  S      +          K+F+   S++        +R   +      L 
Sbjct: 129 SDLMTSSAAASNTTASRNAAQDLLDGEQKLFDSRKSALVGMKSQLASRKDQLGEQIKGLV 188

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            + +     L   +++L  +  L++K  V+   LN  +R   +      + I  +     
Sbjct: 189 VQINATNDSLGLIEQELEGVDALYKKGLVTLQRLNALKRARAELQGNSGQEIAAKAEAEG 248

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              E+  ++     +   EI+++L   +   A+   +         +  I +P++G +  
Sbjct: 249 KAIEIDRQSIQLDEDRRSEIAKELTDVEAKIAENEERRETALDQLRRLDITAPLSGRVHE 308

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               + +   +  Q LM +VP +    ++AKV+ + I  +  G +  VRF  +       
Sbjct: 309 LAVHTVNGVIEPGQTLMLVVPENDDLTVQAKVSTRDIDQLHVGQSVDVRFSAFDQRTTPD 368

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
            +A I  I P I + +       YY + +K    + +   +I+L  G PAEV     + T
Sbjct: 369 VRAEITSIAPDIVKDERT--GISYYPLRVKPESESLAKLKSIKLYPGMPAEVFIKIGDRT 426

Query: 422 LAQEIIHPITDNWPKIFE 439
           +   +  P+TD    +F 
Sbjct: 427 VISYLTKPLTDQMQHVFR 444


>gi|37222090|gb|AAP76486.1| AprE [uncultured bacterium]
          Length = 449

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 75/440 (17%), Positives = 165/440 (37%), Gaps = 14/440 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H ++ +  +R+     +   +L+I+G      W+ L P++  +   G ++       ++S
Sbjct: 16  HDYLAERPERDAGYFARLGWILAIVGAGSFFAWASLAPLDQGIPVQGTVVVSGKRKAVQS 75

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALD 118
             +G++ +  V +G  + QG PL   +  +    +   +   +          +E+  L 
Sbjct: 76  MSNGVVSQILVRDGQVVKQGQPLFQLDQTQVAADVQSLRAQYRMAWASLARWQSERDNLK 135

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +N   + L    + R   +L+   +  S+    F+   +++  S++    ++  +   R
Sbjct: 136 QVNFPAE-LSNDPDPRLALVLEGQRQLFSSRRDAFSREQAALRASIEGAGAQLAGMRRAR 194

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            DL  ++  L       Q+ L+ ++ L +   + +N L + +R + +   +L EN  E  
Sbjct: 195 TDLTAQADSL-------QQQLSNLQPLADNGYIPRNRLMEYQRQLSQVQQQLAENTGESG 247

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            + + I E   +       Y KE+   L   Q        +LT      +   I++   G
Sbjct: 248 RVEQGILESRLKLQQHIEEYQKEVRTQLADAQLKSVTLEEQLTSAGFDLQHSEIIATADG 307

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
             V     +     +Q + L++IVP      +   +    I  V       + F  +   
Sbjct: 308 VAVNLAVHTVGAVVRQGETLLEIVPQGTQLEVEGHLPVNLIDKVGTHLPVDILFTAFNQS 367

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
           R  +    +  I     Q  +      YY +   ++D A    N + ++ G PAE+    
Sbjct: 368 RTPRVPGEVSLISAD--QMIDEKTGAPYYVLRSSVSDQAMEKLNGLVIKPGMPAEMFVRT 425

Query: 418 KNTTLAQEIIHPITDNWPKI 437
              +L   +  P+ D     
Sbjct: 426 GERSLLNYLFKPLLDRAGSA 445


>gi|289679132|ref|ZP_06500022.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae FF5]
          Length = 445

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 71/439 (16%), Positives = 152/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +   +   +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQLVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VRFPAELIAAG---QGQDPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S +K L+ ++ L +   +  N L + +R + +    L +N  E   
Sbjct: 185 GMRRARSDLMAQADSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      +  ++  + I  V       + F  +   R
Sbjct: 305 AVNLGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D A    N + ++ G PAE+     
Sbjct: 365 TPRVSGEVSLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|295701032|ref|YP_003608925.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           sp. CCGE1002]
 gi|295440245|gb|ADG19414.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           sp. CCGE1002]
          Length = 454

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 70/431 (16%), Positives = 149/431 (34%), Gaps = 11/431 (2%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +    +K   ++ ++GI+G + W+   P+       G ++   N   I+ P  GII++  
Sbjct: 28  DESRYVKIGWIVVLVGIVGSLLWAAFAPLSKGTEVQGTVVVAGNRKTIQHPTGGIIREIL 87

Query: 72  VENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           V++G Q+  G  L+   D++T      I  + ++    +  +  E +    +    ++ +
Sbjct: 88  VQDGDQVKAGQVLVRMNDVQTRSQNATIRSQYLTELATKARLVAEATNAKTIAFPRELTD 147

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                 +E   D          ++ +    ++  S+      +           +  +  
Sbjct: 148 GVAAHDQEAEADVQ-----LQEQLLSARRLALKASIGALQESIAGYQAQLAGENDAHAQR 202

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                + Q  LT ++ L  +  V ++ L   +R       E+         +     E  
Sbjct: 203 LLEHQALQDQLTGVRELAIEGYVPRSKLKDLQRQEAVLNGEIARQAGTAGELASQSAEAR 262

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                   +Y+KE+   L   QR      S+L   E       I SP+ GT+V    F+ 
Sbjct: 263 LRIAQAQEDYMKEVRTQLSDVQRDTEALRSRLDESEFNLANSEIRSPVDGTVVGMSVFTE 322

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                    LM +VP  +       +    +  V+ G    + F  +      +    + 
Sbjct: 323 GGTIGPGAKLMDVVPTGEPLEAEGHLEVNLVDKVRTGMPVDMMFTAFNQNTTPRVSGTLT 382

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEII 427
            +       +       YY V  K+T+        ++++ G P E+   A   ++   ++
Sbjct: 383 FVSADRLVDE--HTGAPYYRVRAKVTEQGMKQLRKLDIKPGMPVEIFINAGQRSMLSYLL 440

Query: 428 HPITDNWPKIF 438
            PI D     F
Sbjct: 441 KPIFDRAHTAF 451


>gi|330975564|gb|EGH75630.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 440

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 77/432 (17%), Positives = 170/432 (39%), Gaps = 10/432 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++  +     +    + ++      TW+   P+  +V  SG ++ +     ++    GI
Sbjct: 14  DDMPTSDRGVRRIGVAIVLVTFGLFGTWAAFAPLGSAVYGSGVVMVQSYRKTVQHLEGGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K+  V +G  + +G PL+  +D +     +  +  + + +      ++  D L +   +
Sbjct: 74  VKELLVRDGDTVHKGDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELPSIPPL 133

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                +S          +  +   +VF+   +S    + ++  R+  +      L +   
Sbjct: 134 TISGTDSVRA------KEAIAGEQQVFSTRKNSRLTEISVQRERIGQLKQQISGLRDMIR 187

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              +L  S+  ++T +K+L  +  V +  L +QER +     E+ ++          I+E
Sbjct: 188 TKISLEKSYSSEITELKDLLSQGFVDKQRLLEQERKLDMLKSEVADHESTITKTQLQISE 247

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +      N+  +++++L   Q    D     T L+    +  I +P  G ++  +  
Sbjct: 248 TELQIIQLNKNFSSDVAKELSDVQAKVFDLQETATALQDRLSRVVIRAPEDGMVLDMKVH 307

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +         PL+ IVP S    + A V    I  +  G    VRF  +        +  
Sbjct: 308 TVGGVVSAGTPLLDIVPESSELVVEAHVAITDIDRISIGKLTDVRFSAFNSATTPVIEGE 367

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           + +I     + D     + YY V +K+T+       + +L+ G PAEVL  A   T+ Q 
Sbjct: 368 VTRISADRLKDD---AGEPYYLVRVKLTEKGMKRLGDHKLQPGMPAEVLINAGERTMLQY 424

Query: 426 IIHPITDNWPKI 437
           ++ P ++ + K 
Sbjct: 425 LLKPASNVFIKS 436


>gi|66046389|ref|YP_236230.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae B728a]
 gi|63257096|gb|AAY38192.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae B728a]
 gi|330954602|gb|EGH54862.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae Cit 7]
 gi|330972869|gb|EGH72935.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 445

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 71/439 (16%), Positives = 152/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +   +   +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQLVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VRFPAELIAAG---QGQDPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S +K L+ ++ L +   +  N L + +R + +    L +N  E   
Sbjct: 185 GMRRARSDLLAQADSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      +  ++  + I  V       + F  +   R
Sbjct: 305 AVNLGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D A    N + ++ G PAE+     
Sbjct: 365 TPRVSGEVSLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|331010765|gb|EGH90821.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 445

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 71/439 (16%), Positives = 153/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +   +   +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQSVKEGGPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           ++   +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VHFPAELIAAG---QGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S +K L+ ++ L +   +  N L + +R + +    L +N  E   
Sbjct: 185 GMRRARSDLLAQADSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      +  ++  + I  V       + F  +   R
Sbjct: 305 AVNLGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D A    N + ++ G PAE+     
Sbjct: 365 TPRVSGEVNLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|311105415|ref|YP_003978268.1| type I secretion membrane fusion protein, HlyD family protein
           [Achromobacter xylosoxidans A8]
 gi|310760104|gb|ADP15553.1| type I secretion membrane fusion protein, HlyD family protein
           [Achromobacter xylosoxidans A8]
          Length = 473

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 68/430 (15%), Positives = 149/430 (34%), Gaps = 13/430 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +  +     + +  +S++   GL+ W+    I+  V   G+++    V  I+S   GI++
Sbjct: 54  IHESQARGSRILLWVSLLATGGLLLWAGTGSIDEVVRGEGKVVPSRQVQIIQSLDGGIVE 113

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++  G  LL  +       +        +L       ++             
Sbjct: 114 EILVRPGQEVEAGEVLLKIDSTRFASSLGENNAEYMSLLAKAARLQALATGEPF------ 167

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                  E++L            V+    + +  ++ +   +++    +  +   K    
Sbjct: 168 ----VAPEEVLTQAPGLVEMERNVWQARTTELNATVNVAREQLKQRQEDLRETIAKRDQA 223

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A  S   ++L + + L +  AVS+ DL + +R V +   E +    +       I E  
Sbjct: 224 AASCSLTSRELQVTRPLLKSGAVSEVDLLRLQRDVARYCGEQKGAEAQIDRFQASIKEAE 283

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +      N   +   +L +     A        L    +   + +P+ GT+    + + 
Sbjct: 284 SKLQEAELNIRNQARSELSETNTKLATLRQGKLALADRVKLAEVRAPVRGTVKTLFNNTV 343

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q  + +++IVP      +  ++ P+ I  +     A V+F  Y        +  +E
Sbjct: 344 GGVVQPGKDIIEIVPKDDTLLLEVRIQPRDIGFLHADQKAEVKFTAYDFAIYGGLEGKVE 403

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           +I       +   +   YY V ++       D  + +  G  AEV       T+ Q ++ 
Sbjct: 404 QIGADTVTDE---KGNSYYVVRVRTDRSTVGDKLLPIIPGMVAEVHILTGKRTVLQYLLK 460

Query: 429 PITDNWPKIF 438
           PI       F
Sbjct: 461 PILRAKANAF 470


>gi|66044189|ref|YP_234030.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae B728a]
 gi|63254896|gb|AAY35992.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae B728a]
          Length = 440

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 76/432 (17%), Positives = 170/432 (39%), Gaps = 10/432 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++  +     +    + ++      TW+ L P++ +V  SG ++ +     ++    GI
Sbjct: 14  DDMPTSDRGIRRIGVTIVLVTFGLFGTWAALAPLDNAVYGSGLVMVQSYRKTVQHLEGGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K+  V +G  + +G PL+  +D +     +  +  + + +      ++  D L +   +
Sbjct: 74  VKELLVRDGDTVHKGDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELPSIPPL 133

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                +S          +  +   +VF+   +S    + ++  R+  +      L +   
Sbjct: 134 TITGTDSVRA------KEAIAGEQQVFSTRKNSRLTEISVQRERIGQLKQQISGLRDMIR 187

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              +L  S+  ++T +K+L  +  V +  L +QER +     E+ ++          I+E
Sbjct: 188 TKVSLEKSYSSEITELKDLLSQGFVDKQRLLEQERKLDMLKSEVADHESTITKTQLQISE 247

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +      N+  +++++L   Q    D       L+    +  I +P  G ++  +  
Sbjct: 248 TELQIIQLNKNFSSDVAKELSDVQAKVFDLQETANALQDRLSRVVIRAPEDGMVLDMKVH 307

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +         PL+ IVP S    + A V    I  +  G    V F  +        +  
Sbjct: 308 TVGGVVSAGTPLLDIVPESSELVVEAHVAITDIDRISIGKLTDVHFSAFNSATTPVIEGE 367

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           + +I     + D     + YY V +K+T+       + +L+ G PAEVL  A   T+ Q 
Sbjct: 368 VTRISADRLKDD---AGEPYYLVRVKLTEKGMKRLGDRKLQPGMPAEVLINAGERTMLQY 424

Query: 426 IIHPITDNWPKI 437
           ++ P ++ + K 
Sbjct: 425 LLKPASNVFIKS 436


>gi|298487509|ref|ZP_07005553.1| ABC-type protease exporter, membrane fusion protein (MFP) family
           component PrtE/AprE [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298158024|gb|EFH99100.1| ABC-type protease exporter, membrane fusion protein (MFP) family
           component PrtE/AprE [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 445

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 72/439 (16%), Positives = 153/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  +S  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGISVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +   +   +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQSVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLGRWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           ++   +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VHFPAELIAAG---QGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S +K L+ ++ L +   +  N L + +R + +    L +N  E   
Sbjct: 185 GMRRARSDLLAQADSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      +  ++  + I  V       + F  +   R
Sbjct: 305 AVNLGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D A    N + ++ G PAE+     
Sbjct: 365 TPRVSGEVNLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|316933441|ref|YP_004108423.1| HlyD family type I secretion membrane fusion protein
           [Rhodopseudomonas palustris DX-1]
 gi|315601155|gb|ADU43690.1| type I secretion membrane fusion protein, HlyD family
           [Rhodopseudomonas palustris DX-1]
          Length = 455

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 76/424 (17%), Positives = 166/424 (39%), Gaps = 13/424 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             L   + I G+  W++   +  +V +SG ++ E +V +++ P  G+I +  V +GS++ 
Sbjct: 39  GWLALALLIGGVGGWAVTAELAGAVVASGLLVVESDVKKVQHPTGGVIGELLVRDGSRVE 98

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            G  L+  ++  T   + +   S+  L   +  ++ E+   D +     +     +    
Sbjct: 99  GGDVLVRLDETVTRSNLAIVVKSLNELNVRKARLEAERDDADRVVFPSHLTALTEDPE-- 156

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                +G   +  +++F    S+          R+  +      L  +S+  R  ++   
Sbjct: 157 -----IGDLMTGEARLFELRRSARQGQKAQLQERIGQLDEEIAGLTGQSNSKRREITFIH 211

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L  ++ L+EK  V  N +   ER   +   E  + I           E   +      
Sbjct: 212 QELVGVRELWEKRLVPINRVMTLERESVRLDGESNQLIAAAAQAKGKKIETGLQIIQIDQ 271

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           +   +++++L + Q   A+ + +    E   ++  I +P +GTI      +       S+
Sbjct: 272 DLRSDVAKELREIQGKTAELVERKVAAEDQLKRIDIRAPQSGTIHQLSVHTVGGVVGASE 331

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            LM IVP      +  K++P  I  V  G  A +RF  ++     +   ++ ++   I+Q
Sbjct: 332 TLMLIVPDEDALNVEVKLSPSDIDQVHVGQPAVLRFSAFSQRTTPEINGVVSRVSADITQ 391

Query: 377 QDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
                 +  YY   + +     +    + L  G P E        T+A  ++ P+ D   
Sbjct: 392 DQKT--SAAYYIARVTMPKNEIARLGQVRLMPGMPVEAFIQTDTRTVASYLVKPLHDQIM 449

Query: 436 KIFE 439
           + F 
Sbjct: 450 RAFR 453


>gi|330941718|gb|EGH44474.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 440

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 77/432 (17%), Positives = 170/432 (39%), Gaps = 10/432 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++  +     +    + ++      TW+   P+  +V  SG ++ +     ++    GI
Sbjct: 14  DDMPTSDRGVRRIGVAIVLVTFGLFGTWAAFAPLGSAVYGSGVVMVQSYRKTVQHLEGGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K+  V +G  + +G PL+  +D +     +  +  + + +      ++  D L +   +
Sbjct: 74  VKELLVRDGDTVQKGDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELPSIPPL 133

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                +S          +  +   +VF+   +S    + ++  R+  +      L +   
Sbjct: 134 TISGTDSVRA------KEAIAGEQQVFSTRKNSRLTEISVQRERIGQLKQQISGLRDMIR 187

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              +L  S+  ++T +K+L  +  V +  L +QER +     E+ ++          I+E
Sbjct: 188 TKISLEKSYSSEITELKDLLSQGFVDKQRLLEQERKLDMLKSEVADHESTITKTQLQISE 247

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +      N+  +++++L   Q    D     T L+    +  I +P  G ++  +  
Sbjct: 248 TELQIIQLNKNFSSDVAKELSDVQAKVFDLQETATALQDRLSRVVIRAPEDGMVLDMKVH 307

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +         PL+ IVP S    + A V    I  +  G    VRF  +        +  
Sbjct: 308 TVGGVVSAGTPLLDIVPESSELVVEAHVAITDIDRISIGKLTDVRFSAFNSATTPVIEGE 367

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           + +I     + D     + YY V +K+T+       + +L+ G PAEVL  A   T+ Q 
Sbjct: 368 VTRISADRLKDD---AGEPYYLVRVKLTEKGMKRLGDHKLQPGMPAEVLINAGERTMLQY 424

Query: 426 IIHPITDNWPKI 437
           ++ P ++ + K 
Sbjct: 425 LLKPASNVFIKS 436


>gi|188581791|ref|YP_001925236.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium populi BJ001]
 gi|179345289|gb|ACB80701.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium populi BJ001]
          Length = 437

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 70/415 (16%), Positives = 157/415 (37%), Gaps = 12/415 (2%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           +GL  W+    +  +V + G ++ +  V +++ P  G++ + +V +G  +  G  ++  +
Sbjct: 29  VGLGGWAATTELAGAVVAPGTLVVDSFVKKVQHPTGGVVGELRVRDGDLVRAGQVVMRLD 88

Query: 89  DIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           +  T   +   D     +   +  ++ E+     ++    +  +A    E       G+ 
Sbjct: 89  ETVTRANLAVVDKSLAELTARQGRLEAERDGAPRVSFAAVLRGRAQGDPEA------GRV 142

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            +  +++F     +          R   +      L  + +  R       ++L  +++L
Sbjct: 143 MAGETRLFELRRDARAGQKAQLKERTGQLREEIQGLTGQIAGKRRETELINRELEGVRDL 202

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           + KN V    +   ER   +   E  + +         I+E   +      +   E++++
Sbjct: 203 WRKNLVPIQRVTALERDAARLEGEHGQLVASVAQAKGKISETELQVIQVDQDLRSEVAKE 262

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L + Q   A+ + K    E   ++  I +P  G +      +        +P+M IVP +
Sbjct: 263 LSEVQGKIAELVEKRVAAEDQLKRIDIRAPQDGMVHQLAVHTIGGVVSPGEPIMLIVPRA 322

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               I AKV PK I  V+ G  A +R   +      + +  +  +     Q  +      
Sbjct: 323 DTLVIEAKVAPKDIDQVRLGQKAVLRLTAFNQRTTPEIEGTVSLVAAD--QITDEKTGTS 380

Query: 386 YYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +++V +K      +    I+L  G PAEV       T+   +  P+ D   + F+
Sbjct: 381 FFKVHVKPEPDHVARLKGIKLVPGMPAEVFIQTGERTVLSYLTKPLNDQVRRAFK 435


>gi|170741501|ref|YP_001770156.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium sp. 4-46]
 gi|168195775|gb|ACA17722.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium sp. 4-46]
          Length = 447

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 66/410 (16%), Positives = 159/410 (38%), Gaps = 12/410 (2%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    I  +V + G+++ E +V +++ P  G++ +  V++G  +  G  L+  ++ +T 
Sbjct: 44  WATFTQISGAVIAPGQLVVESDVKKVQHPTGGVVGELLVQDGDPVKAGDVLIRLDETQTR 103

Query: 94  DLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             +D+   ++  L   R   + E+     +    D+L++A             +     +
Sbjct: 104 AGLDILLKALDELSARRARNEAERDGAGGITFPADLLQRAKADATA------ARLIDGET 157

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K+F   +++          R+  +      L  ++S     ++    +L  ++ L+ KN 
Sbjct: 158 KLFTSRVNAREGQKAQLRERLAQLQQEIGGLTQQASAKEREIAFIGSELKGVRELYAKNL 217

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V    LN  ER   +   E  + +         ++E+  +      +   E+ ++L + +
Sbjct: 218 VQLPRLNALERDATRLEGERGQLLASTAAQRGKMSEIELQILQIDQDMRTEVGKELAEIR 277

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
             +++ + K    E   ++  + +P  G +      +       ++P M IVP S    +
Sbjct: 278 SKWSELVEKRVAAEDQLKRVELRAPQDGIVHQMTVHTIGGLVTPNEPAMLIVPSSDRLAL 337

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
             K+ P  I +V+    A +RF  +      +    + ++   ++   +      +Y   
Sbjct: 338 EVKIQPHDIDNVRFDQKAVLRFSAFNQRTTPEIDGQVTRVSADVT--TDPKTGASFYTAR 395

Query: 391 LKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           + + D   +    + L  G P E        T+   +  P+TD   K + 
Sbjct: 396 ISVPDDQRARLGAVRLVPGMPVESFIQTGERTVLSYLTKPLTDQITKAWR 445


>gi|330900588|gb|EGH32007.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 445

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 152/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +   +   +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQLVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    +++      + +     L        ++F+    ++ R        +    +   
Sbjct: 128 VRFPAELIAAG---QGQDPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGMQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S +K L+ ++ L +   +  N L + +R + +    L +N  E   
Sbjct: 185 GMRRARSDLLAQADSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      +  ++  + I  V       + F  +   R
Sbjct: 305 AVNLGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D A    N + ++ G PAE+     
Sbjct: 365 TPRVSGEVSLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|302184986|ref|ZP_07261659.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae 642]
          Length = 445

 Score =  333 bits (855), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 73/436 (16%), Positives = 150/436 (34%), Gaps = 3/436 (0%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++ K  V  G  + +G PL   +  +    +   +   +     +   +S  D LN 
Sbjct: 68  DGGVVSKILVSEGQLVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLNE 127

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                E     + +     L        ++F+    ++ R        +    L    + 
Sbjct: 128 VRFPAELIAAGQGQDPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMR 187

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S L A   S +K L+ ++ L +   +  N L + +R + +    L +N  E   + +
Sbjct: 188 RARSDLLAQADSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQ 247

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I E       +   Y KE+       Q        +L     + +   IL+P  G  V 
Sbjct: 248 GIVESRLRIQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVN 307

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +     +  + L++IVP      +  ++  + I  V       + F  +   R  +
Sbjct: 308 LGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPR 367

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
               +  I     Q +     Q YY +   + D A    N + ++ G PAE+       +
Sbjct: 368 VSGEVSLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTGERS 425

Query: 422 LAQEIIHPITDNWPKI 437
           L   +  P+ D     
Sbjct: 426 LLNYLFKPLLDRAGSA 441


>gi|73666788|ref|YP_302804.1| Type I secretion membrane fusion protein, HlyD [Ehrlichia canis
           str. Jake]
 gi|72393929|gb|AAZ68206.1| Type I secretion membrane fusion protein, HlyD [Ehrlichia canis
           str. Jake]
          Length = 505

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 80/444 (18%), Positives = 170/444 (38%), Gaps = 31/444 (6%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + +L   G+ G+  W+ + P++ SV + GE+++      ++    G+I K  V+
Sbjct: 71  PLFSGFIIILLFFGVFGI--WAAVAPLDGSVIAQGEVISSSEKQIVQHLEGGLIDKILVK 128

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKA 130
            G  + +  P++   +      +D+ K  + +L      +   K   + ++    +   +
Sbjct: 129 EGELVQKNQPIIYLHNTTAQANLDIIKERMLDLLATEARLIAIKYDRESIDFPNTIKNLS 188

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            E   +Q++           ++F     ++   + +   R + +      L  + +    
Sbjct: 189 DEKTRDQII-------QNQQQLFESHKKNISGQIDILQQRTKQLRQELSGLSAQLTSATT 241

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                 ++L   KNL E   +S+  +   ER   +S  ++ +      ++ + I E   E
Sbjct: 242 QHKLISEELETKKNLLETGYISKPYIIALERQYAESEGKIGQLKSAIASVNQKIGENKLE 301

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                 N   +I+ DL+       D   ++   +   ++ TI SP AG I   +  +   
Sbjct: 302 IINITNNVQNKINLDLKDITSAITDLKERMKTAQDILDRTTIRSPHAGVITGLKYHTEGG 361

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPHY 355
                 P+  +VP +    I AK+  + I+ +                +G  A VR   Y
Sbjct: 362 VIPPGAPITNVVPLNDDLVIDAKIQTRHIEEILSAQMKDKNIVSYEKYRGLKAKVRLSAY 421

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVL 414
              +      I+ ++      + N      YY++ + I  + +    N++L  G PAEV 
Sbjct: 422 NIRKIGLVNGIVVQVSADALSEIN---GMRYYKIQVIIPKEQSEKLRNLKLYPGMPAEVF 478

Query: 415 FTAKNTTLAQEIIHPITDNWPKIF 438
              ++ TL   +  PIT  + K F
Sbjct: 479 IITQSRTLLNYLFTPITSTFEKAF 502


>gi|317405669|gb|EFV85966.1| metalloprotease secretion protein [Achromobacter xylosoxidans C54]
          Length = 448

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 67/427 (15%), Positives = 149/427 (34%), Gaps = 17/427 (3%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S +    +  +G  G + W+   P++  V+  G ++       + S   G++    V  G
Sbjct: 32  SARFGWWVLALGFGGFLAWAAWAPLDNGVAMPGIVVVTGERQAVDSIEGGVVSALLVAEG 91

Query: 76  SQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             +  G  L+  +D         +  ++ ++      +  E+   D L            
Sbjct: 92  DPVRAGQALVRLDDTRVRGEARSLRAQQAAVMAREARLLAERDGRDDLA----------- 140

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             + Q        ++   ++F    +++   L      +         LE+  +  R   
Sbjct: 141 PPDAQANAEAAAAYAMERQLFASRRAALAGELAGIEATLAGSRALAGGLESTLAHKRTQR 200

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +  ++ L  +++L  +  V +N + + ER + +   +L  ++       + I EL     
Sbjct: 201 ALLREQLGNLRDLAREGYVPRNRVLELERSLAQLDGDLASDLGALGQTRQQIAELALRGQ 260

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                + +E+  DL + +        KL   E       I +P++GT+V   + +     
Sbjct: 261 QRRDAFQREVRTDLAETRVQREQLTQKLATAEFDLAHSEIRAPVSGTVVALATHTVGGVV 320

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           Q    LM+IVP      +  ++  + I  V+      + F  +   R  + +  +  +  
Sbjct: 321 QPGSRLMEIVPEDVPLVVEGRLPVESIDKVRASLPVELMFTAFDASRTPRLEGTVTLVSA 380

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
              + D N   + YY +   +         +  LR G P EV       +L   +  P+ 
Sbjct: 381 DRFEDDRN--GRPYYRLRADVAPGQLRRIGDAPLRAGMPVEVFVRTGERSLLNYLFKPLL 438

Query: 432 DNWPKIF 438
           D     +
Sbjct: 439 DRARLAW 445


>gi|330981414|gb|EGH79517.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 445

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 152/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G ++ +G PL   +  +    +   +   +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQRVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VRFPAELIAAG---QGQDPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S +K L+ ++ L +   +  N L + +R + +    L +N  E   
Sbjct: 185 GMRRARSDLMAQADSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      +  ++  + I  V       + F  +   R
Sbjct: 305 AVNLGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   +   A    N + ++ G PAE+     
Sbjct: 365 TPRVSGEVSLISADQMQDEKT--GQPYYVLRTSVGGAALEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|77458906|ref|YP_348412.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           fluorescens Pf0-1]
 gi|77382909|gb|ABA74422.1| putative HlyD family secretion protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 449

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 74/440 (16%), Positives = 166/440 (37%), Gaps = 14/440 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           + ++ +  +R+     +   +L+++G     TW+ L P++  +   G ++       ++S
Sbjct: 16  NDYITERPERDAKFFARMGWILALVGAGSFFTWAALAPLDQGIPVQGTVVVSGKRKAVQS 75

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALD 118
             SG++ +  V  G  + QG PL   +  +    +   +   +           E+  L 
Sbjct: 76  MSSGVVSRILVREGEIVKQGQPLFRLDQTQVAADVQSLQAQYRMAWASLARWQAERDNLK 135

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +    ++ + A + R   +L+   +  S+  + F+   +++  S++    ++  +   R
Sbjct: 136 QVTFPAELSDNA-DPRLALVLEGQRQLFSSRREAFSREQAALRASIEGATAQLAGMRRAR 194

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            DL  ++  L       Q+ L+ ++ L +   + +N L + +R + +   +L EN  E  
Sbjct: 195 TDLNAQADSL-------QQQLSNLQPLADNGYIPRNRLMEYQRQLSQVQQQLAENTGESG 247

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            + + I E   +       Y KE+   L   Q        +LT      +   IL+   G
Sbjct: 248 RVEQGILESRLKLQQHGEEYQKEVRTQLADAQLKSVTLSEQLTSAGFDLQHSEILATADG 307

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
             V     +     +Q + L++IVP      +   +    I  V       + F  +   
Sbjct: 308 VAVNLGVHTEGAVVRQGETLLEIVPQGTRLEVEGHLPINLIDKVGTHLPVDILFTAFNQS 367

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
           +  +    +  I     Q  +      YY +   ++D A    N + ++ G PAE+    
Sbjct: 368 KTPRVPGEVSLISAD--QMVDEKTGVPYYVLRSSVSDQAMEKLNGLVIKPGMPAEMFVRT 425

Query: 418 KNTTLAQEIIHPITDNWPKI 437
              +L   +  P+ D     
Sbjct: 426 GERSLLNYLFKPLLDRAGSA 445


>gi|289678426|ref|ZP_06499316.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae FF5]
          Length = 440

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 77/433 (17%), Positives = 170/433 (39%), Gaps = 10/433 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
             ++  +     +    + ++      TW+ L P+  +V  SG ++ +     ++    G
Sbjct: 13  TDDMPTSDRGIRRIGVAIVLVTFGLFGTWAALAPLGNAVYGSGVVMVQSYRKTVQHLEGG 72

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I+K+  V +G  + +G PL+  +D +     +  +  + + +      ++  D L +   
Sbjct: 73  IVKELLVRDGDTVHKGDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELPSIPP 132

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +     +S          +  +   +VF+   +S    + ++  R+  +      L +  
Sbjct: 133 LTISGTDSVRA------KEAIAGEQQVFSTRKNSRLTEISVQRERIGQLKQQISGLRDMI 186

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               +L  S+  ++T +K+L  +  V +  L +QER +     E+ ++          I+
Sbjct: 187 RTKISLEKSYSSEITELKDLLSQGFVDKQRLLEQERKLDMLKSEVADHESTITKTQLQIS 246

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   +      N+  +++++L   Q    D     T L+    +  I +P  G ++  + 
Sbjct: 247 ETELQIIQLNKNFSSDVAKELSDVQAKVFDLQETATALQDRLSRVVIRAPEDGMVLDMKV 306

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +         PL+ IVP S    + A V    I  +  G    V F  +        + 
Sbjct: 307 HTVGGVVSAGTPLLDIVPESSELVVEAHVAINDIDRISIGKLTDVHFSAFNSATTPVIEG 366

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            + +I     + D     + YY V +K+T+       + +L+ G PAEVL  A   T+ Q
Sbjct: 367 EVTRISADRLKDD---AGEPYYLVRVKLTEKGMKRLGDRKLQPGMPAEVLINAGERTMLQ 423

Query: 425 EIIHPITDNWPKI 437
            ++ P ++ + K 
Sbjct: 424 YLLKPASNVFIKS 436


>gi|146338019|ref|YP_001203067.1| HlyD family secretion protein [Bradyrhizobium sp. ORS278]
 gi|146190825|emb|CAL74830.1| putative secretion protein (HlyD family); putative Proteases
           secretion protein [Bradyrhizobium sp. ORS278]
          Length = 445

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 70/437 (16%), Positives = 173/437 (39%), Gaps = 13/437 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           ++ K++    L     + +    G+  W+    I  ++ + G+I+ E NV +++ P  G+
Sbjct: 16  ESAKQSIRRHLIVGMAVVLAVAGGMGGWAATQQISGALIAPGQIVVESNVKKVQHPTGGV 75

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNK 123
           + + +  +G  +  G  ++  +D  T   + +   ++  L+     ++ E+     +   
Sbjct: 76  VGELRARDGDVVKSGDIVVRLDDTVTKASLAIVTKNLDALQARAARLEAEQRGWAKILFP 135

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +LE+  +   + L        ++ +K+F   ++           R+  +      L  
Sbjct: 136 QQLLERMSDPDVKSLT-------ASETKLFEVRVNGRIGQKAQLRERVAQLSEEIEGLSA 188

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +     ++  QK+L  ++ L+E++ V  + L   ER   +   E  + I  +      
Sbjct: 189 QVAAKDQEIALVQKELDGVRQLYEQHLVQLSRLTTLERDAARLNGERAQYIAARAQAKGK 248

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I+E   +      + + E+S+DL +      + + +    E    +  I +P  G ++ +
Sbjct: 249 ISETELQIIQVDKDMVSEVSKDLRETTDKIGEFVERKVTAEDQLRRVDIRAPQDGMVLQS 308

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +          +M IVP S    + AKV P+ I  ++ G    +R   +      + 
Sbjct: 309 SVHTVGGVITAGDTIMLIVPQSDDLQVEAKVNPQDIDKLQVGQKTLLRLSAFNQRTTPEL 368

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
             ++ ++ P ++        Q YY + + +     +   +++L  G P E      + T+
Sbjct: 369 NGVVSRVSPDVTTDQRT--GQSYYTIRVSMPPEEIARLGDVKLIPGMPVEAFVQTGDRTV 426

Query: 423 AQEIIHPITDNWPKIFE 439
              ++ P+ D   + F 
Sbjct: 427 ISYLMKPLHDQLMRAFR 443


>gi|229590599|ref|YP_002872718.1| putative HlyD family secretion protein [Pseudomonas fluorescens
           SBW25]
 gi|229362465|emb|CAY49371.1| putative HlyD family secretion protein [Pseudomonas fluorescens
           SBW25]
          Length = 437

 Score =  332 bits (851), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 68/432 (15%), Positives = 154/432 (35%), Gaps = 14/432 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R+     +   LL+++G  G   W+ L P++  +   G ++       +++   G++ +
Sbjct: 12  ERDATFFTRMGWLLTLVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTLSPGVVSR 71

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDV 126
             V+ G  + QG PL   +  +    +   +   +          +E+     +    + 
Sbjct: 72  ILVKEGEHVKQGQPLFRLDQTQHQADVQSLQAQYRMAWASVARWQSERDNHASIRFPAE- 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L    +     +L+   +  S+  + F    + +  ++     ++  +   R DL  ++ 
Sbjct: 131 LSANPDPALALVLEGQRQLFSSRREAFAREQAGIRANIDGASAQLGGMRRARSDLTAQAQ 190

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LR  LS        ++ L +   + +N L + +R + +   +L +N  E   + + I E
Sbjct: 191 SLRDQLS-------NLQPLADNGYIPRNRLMEYQRQLSQVQQDLAQNSGESGRVEQGILE 243

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +       Y KE+   L   Q        +LT      +   I +P  G  V     
Sbjct: 244 SRLKLQQHSEEYQKEVRSQLADAQLRSLTLEQQLTSAGFDLQHSEINAPADGIAVNLSVH 303

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +  + L++IVP      +   +    +  V       + F  +   R  +    
Sbjct: 304 TEGAVVRAGETLLEIVPQGTRLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGE 363

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  I     Q  +      YY +   ++D A    + + ++ G PAE+       +L   
Sbjct: 364 VSLISAD--QMLDEKTGAPYYVLRTTVSDAALEKLHGLVIKPGMPAEMFVRTGERSLLNY 421

Query: 426 IIHPITDNWPKI 437
           +  P+ D     
Sbjct: 422 LFKPLLDRAGSA 433


>gi|251789710|ref|YP_003004431.1| type I secretion membrane fusion protein, HlyD family [Dickeya zeae
           Ech1591]
 gi|247538331|gb|ACT06952.1| type I secretion membrane fusion protein, HlyD family [Dickeya zeae
           Ech1591]
          Length = 448

 Score =  332 bits (851), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 68/437 (15%), Positives = 165/437 (37%), Gaps = 13/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M     R+   +L+    L   G  G + W++L P++  V+  G ++   N   I+    
Sbjct: 17  MRDRASRDEERALRLGWWLVFAGFGGFLLWALLAPLDKGVAVQGNVVVSGNRKVIQHMQG 76

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           GI+++ QV+ G ++  G  LLT   ++     + +  +   +      +  E+     L 
Sbjct: 77  GIVERIQVKEGDRVSAGQVLLTLNAVDARTTSEGLGSQYDQLIAREARLLAEQRNQTSLV 136

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               ++E         ++        +  +        V  S+         + ++ + L
Sbjct: 137 ATPRLVEARQRPEVATIVALQEDLLRSRQQALKLETDGVRASI-------EGLEMSLVAL 189

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +   +  ++  +   + L  ++ L   N V +N + + ER+  + + EL +   E     
Sbjct: 190 QKVMTSKQSEQAVLSQQLQGLRPLAADNYVPRNKMLETERLFAQVSGELAQTSGEVGRTR 249

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R I +           Y KE+  +L   Q    + +S+    +       + +P+AGT+V
Sbjct: 250 RDIQQQKLRIAQRQQEYDKEVGSELSDVQAKLNEVISQREKADFNLANVQVRAPVAGTVV 309

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F+        Q +M+IVP  +   +  ++  + +  V+ G    ++F  ++     
Sbjct: 310 DLKVFTEGGVIGAGQVMMEIVPEDQPLLVDGRIPVEMVDKVRSGLPVELQFTAFSQSTTP 369

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNT 420
           +    +  +       + +     YY + +++++    S + +E++ G P +        
Sbjct: 370 RVPGTVTLLSADRLVDEKD--GSPYYSLRIQVSEEGKRSLHGLEIKPGMPVQGFVRTGER 427

Query: 421 TLAQEIIHPITDNWPKI 437
           +    +  P+ D     
Sbjct: 428 SFINYLFKPLMDRMHLA 444


>gi|293396942|ref|ZP_06641216.1| HlyD family type I secretion membrane fusion protein [Serratia
           odorifera DSM 4582]
 gi|291420413|gb|EFE93668.1| HlyD family type I secretion membrane fusion protein [Serratia
           odorifera DSM 4582]
          Length = 443

 Score =  331 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 77/431 (17%), Positives = 168/431 (38%), Gaps = 13/431 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + + ++     +   L+  +G+ G   W+   P++  V+S G ++   N   +++P SGI
Sbjct: 14  QQIPQDERRFTRMGWLVVGVGLFGFFAWAAFAPLDKGVASPGSVIVSGNRKTVQAPASGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNK 123
           IK   V+ G ++  G  L+    ++    +D  +            +  E+  LD +   
Sbjct: 74  IKNIAVKEGDKVKAGEVLVQLSQVQAQAQVDSLRDQYYTTLATEGRLLAERDGLDKVTFS 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +L+   + R  +++    +   +        I    +S+     +++ +  ++++   
Sbjct: 134 PVLLQLQTQPRVAEIIALQNQLFHSRRLGLQSEIDGYKQSMDGMRFQLKGLQDSKVNKNI 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + + LR       + +  MK L     + +N   + +R   +    + E +     + + 
Sbjct: 194 QLASLR-------EQMNSMKQLAADGYLPRNRYLEVQRQFAEVNGSIDETLGRIGQLQKQ 246

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           + E   + +  FA+Y +E+   L Q Q   ++  +KL +         I SP+ GT+V  
Sbjct: 247 LQESQQKVDQRFADYQREVRTQLAQTQMDASEFRNKLEMANFDLGNTAITSPVDGTVVGL 306

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             F+          LM +VP      + A++    I  V  G    + F  +   +  K 
Sbjct: 307 TIFTQGGVVGAGDHLMDVVPSQANLVVDARLKVDMIDKVYHGLPVDLMFTAFNQNKTPKI 366

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
           +  +  I         N   + YY++ + +T       N  E++ G P EV     + +L
Sbjct: 367 EGSVTLISADRLVDKAN--GEPYYQMQVTVTPEGMKKLNAEEIKPGMPVEVFVKTGSRSL 424

Query: 423 AQEIIHPITDN 433
              +  PI D 
Sbjct: 425 LSYLFKPILDR 435


>gi|289625386|ref|ZP_06458340.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|330866876|gb|EGH01585.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. aesculi str. 0893_23]
          Length = 445

 Score =  331 bits (850), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 152/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L +        W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAVAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +   +   +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQSVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           ++   +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VHFPAELIAAG---QGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S +K L+ ++ L +   +  N L + +R + +    L +N  E   
Sbjct: 185 GMRRARSDLLAQADSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      +  ++  + I  V       + F  +   R
Sbjct: 305 AVNLGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D A    N + ++ G PAE+     
Sbjct: 365 TPRVSGEVNLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|330899769|gb|EGH31188.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 440

 Score =  331 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 77/433 (17%), Positives = 169/433 (39%), Gaps = 10/433 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
             ++  +     +    + ++      TW+ L P+  +V  SG ++ +     ++    G
Sbjct: 13  TDDMPTSDRGVRRIGVAIVLVTFGLFGTWAALAPLGNAVYGSGVVMVQSYRKTVQHLEGG 72

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I+K+  V +G  + +G PL+  +D +     +  +  + + +      ++  D L +   
Sbjct: 73  IVKELLVRDGDTVQKGDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELPSIPP 132

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +     +S          +  +   +VF+   +S    + ++  R+  +      L +  
Sbjct: 133 LTISGTDSVRA------KEAIAGEQQVFSTRKNSRLTEISVQRERIGQLKQQISGLRDMI 186

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               +L  S+  ++T +K+L     V +  L +QER +     E+ ++          I+
Sbjct: 187 RTKISLEKSYSSEITELKDLLSHGFVDKQRLLEQERKLDMLKSEVADHESTITKTQLQIS 246

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   +      N+  +++++L   Q    D     T L+    +  I +P  G ++  + 
Sbjct: 247 ETELQIIQLNKNFSSDVAKELSDVQAKVFDLQETATALQDRLSRVVIRAPEDGMVLDMKV 306

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +         PL+ IVP S    + A V    I  +  G    V F  +        + 
Sbjct: 307 HTVGGVVSAGTPLLDIVPESSELVVEAHVAINDIDRISIGKLTDVHFSAFNSATTPVIEG 366

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            + +I     + D     + YY V +K+T+       + +L+ G PAEVL  A   T+ Q
Sbjct: 367 EVTRISADRLKDD---AGEPYYLVRVKLTEKGMKRLGDRKLQPGMPAEVLINAGERTMLQ 423

Query: 425 EIIHPITDNWPKI 437
            ++ P ++ + K 
Sbjct: 424 YLLKPASNVFIKS 436


>gi|26988527|ref|NP_743952.1| HlyD family secretion protein [Pseudomonas putida KT2440]
 gi|24983296|gb|AAN67416.1|AE016369_1 HlyD family secretion protein [Pseudomonas putida KT2440]
          Length = 441

 Score =  331 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 79/434 (18%), Positives = 171/434 (39%), Gaps = 15/434 (3%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +L  +     +    +  +      TW+   P+  +V  +G +  ++    ++    G
Sbjct: 13  FDDLPTSDRGIRRIGLTVVFVTFGIFGTWAAFAPLSNAVHGTGVVTVQNYRKTVQHLEGG 72

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNN 122
           I+K+    +G  + +G PL+  ++ + +   +  +  +   R     +  E+  LD +  
Sbjct: 73  IVKELHARDGDLVKKGDPLIVLDESQLSAEYESTRNQLIVARYKEARLRAERDGLDSI-- 130

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              ++E     R ++ L       +   +VF     S+   + +   R++ +      L 
Sbjct: 131 PSVIMEGTDSDRAQEAL-------AGEQQVFKARHDSLLGEISVNRERIQQMQQQIAGLN 183

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           +       L  S+  ++  +K L  +  V    L +QER +     E+ ++         
Sbjct: 184 DMIRTKAGLNKSYSGEIKQLKELLAEGFVDNQRLLEQERKLDMLKTEVADHQSSITKTKL 243

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I E   +       +  +++++L   Q    D   K   L     +  I +P +G ++ 
Sbjct: 244 QIGETELQIVQLKKKFDADVAKELSDVQAQVFDLQEKEAALRDRLSRVVIRAPESGMVLD 303

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +       + PL+ IVP      + AKV P+ I  ++ G TA VRF  +       
Sbjct: 304 MKVHTIGGVVSAATPLLDIVPAQSDLVVEAKVAPRDIDRLELGKTADVRFSAFNQATTPV 363

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
            +  + +I      ++      +YY V +K+T+       N +L+ G PAEVL  A + T
Sbjct: 364 IEGKLTRISADSLVEER--SGDQYYLVRVKVTEDGMKKLGNRKLQPGMPAEVLINAGDRT 421

Query: 422 LAQEIIHPITDNWP 435
           + Q ++ P  + + 
Sbjct: 422 MLQYLLKPARNMFA 435


>gi|307544060|ref|YP_003896539.1| mandelate racemase [Halomonas elongata DSM 2581]
 gi|307216084|emb|CBV41354.1| K02022 [Halomonas elongata DSM 2581]
          Length = 449

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 83/435 (19%), Positives = 185/435 (42%), Gaps = 13/435 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +L  +  A+      + +I   G  +W++L  + ++V +SG +  E     ++    GI+
Sbjct: 19  SLPTSGRAAHWIGIAIVLIAFGGFGSWAVLASLSVTVVASGTVSVESFKKTVQHFEGGIV 78

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV---SIKNLRCHIDTEKSALDFLNNKY 124
            +  V++G ++ QG  L+  ++ ++   +++ +    +    +  +  E+   + L    
Sbjct: 79  SRIDVDDGDRVEQGQTLIVLDNTQSQSQLEIAQAKAFTAGAQKARLIAEQQGKETLTFPP 138

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            ++E+A  + E +      +  +    +F    SS    L     + R        LE  
Sbjct: 139 SLVEQASGNAERE------QTLAVQRSLFVSRRSSQEGELGALAAQSRQFREQIEGLEQN 192

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            ++ R  ++S   +    ++LF     +   + + ER V +   +  E+  +   +   I
Sbjct: 193 MAINRERITSLNAEADDYRSLFRAGLGNNQRIRELERQVMQYRADSAESKAQIAQLRSRI 252

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E    A ++  NY K+++  L + Q        K   L     + TI +P+AGT+V   
Sbjct: 253 SENTLRAQVQRQNYHKDVNEQLREAQSQLESSREKAQALSDRVRRTTITAPVAGTVVGLT 312

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           + +     +  +P+M IVP S    I A++  +++ +V  G  A +RF  +   R     
Sbjct: 313 THTIGAVIEPGKPVMHIVPSSDGFMIEARIPAQEVDNVYPGAHANIRFSAFNQRRVPVMD 372

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
            ++  +     + +       YY+  + +   D     ++++L +G PAEV+      TL
Sbjct: 373 GVVRHVSADSFEDE--STGVNYYKARVDVSPDDREELGDDLQLLSGMPAEVMIETGKKTL 430

Query: 423 AQEIIHPITDNWPKI 437
           A+ ++ P+TD   + 
Sbjct: 431 AEYLLQPVTDMLRRA 445


>gi|15965789|ref|NP_386142.1| putative toxin secretion transmembrane protein [Sinorhizobium
           meliloti 1021]
 gi|307311324|ref|ZP_07590967.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
 gi|307318857|ref|ZP_07598289.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|15075058|emb|CAC46615.1| Rhizobiocin secretion protein RspE [Sinorhizobium meliloti 1021]
 gi|306895578|gb|EFN26332.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|306899625|gb|EFN30253.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
          Length = 436

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 78/440 (17%), Positives = 158/440 (35%), Gaps = 7/440 (1%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     + + R+    L     + +  I     W+    +  +V +SG  + + +V +++
Sbjct: 1   MSSTEAEAVTRSIRRHLAIGMAVGLALIGAAGAWATTTQLAGAVVASGNFVVDSHVKKVQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
            P  G+I +  VE G  +  G  L+  +  +T   + +    +  L   +    + L+  
Sbjct: 61  HPTGGVIGEILVEEGDWVKAGQVLMRLDPTQTKANLRIVTKRLDELMARL----ARLEAE 116

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
            +    LE   E +       +    +  SK+F Y   S        L R+  +      
Sbjct: 117 RDDRGELEFPTELKVRAKERAVASAINGESKLFEYRRRSREGRRSQLLERIVQLQHEIAG 176

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L+ +       LS    ++  +++L E+  VS   LN+ E           E I +Q   
Sbjct: 177 LDAQQQAYDRGLSILDAEIASLRSLHERGIVSVQRLNELETRAATFEGLRGEKIAQQAQA 236

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              I E   +      +   E+ R+L + Q    +   +    E    +  +L+P  G +
Sbjct: 237 AGRIAETRLQILQIDEDLKTEVGRELREVQAQLGEFTERKIAAEDQLRRIDMLAPQGGIV 296

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 +       +  +M IVP S    I A++ P+ I  ++ G    +R   +     
Sbjct: 297 HQLNVHTVGGVISPADVVMSIVPDSDRLAIEARIRPQDIDQIQLGQDVVLRLSAFNQRTT 356

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKN 419
            +    + +I   +++         YY V + +     +   ++E   G PAE       
Sbjct: 357 PELGGSVSRIAADLTEDPR--SGLSYYVVRVAVPGAELARLGSLEPLPGMPAEAFIQTGQ 414

Query: 420 TTLAQEIIHPITDNWPKIFE 439
            T    +I P++D   + F 
Sbjct: 415 RTALSYLIKPLSDQISRAFR 434


>gi|213970071|ref|ZP_03398203.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. tomato T1]
 gi|301381427|ref|ZP_07229845.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058425|ref|ZP_07249966.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. tomato K40]
 gi|302130326|ref|ZP_07256316.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213925175|gb|EEB58738.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. tomato T1]
          Length = 445

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 151/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L ++G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLVGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +       +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQLVKEGEPLFRLDQTQVQADVQSLGAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VRFPAELIAAG---QGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S ++ L  ++ L +   +  N L + +R + +    L +N  E   
Sbjct: 185 GMRRARSDLLAQAESLRQQLRNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      +  ++  + I  V       + F  +   R
Sbjct: 305 AVNMGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D A    N + ++ G PAE+     
Sbjct: 365 TPRVAGEVSLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|159185693|ref|NP_357284.2| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
 gi|159140827|gb|AAK90069.2| secretion protein, HlyD family [Agrobacterium tumefaciens str. C58]
          Length = 452

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 162/438 (36%), Gaps = 11/438 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +  + R+          + +    G   W+   P+  ++ + G  +   N   ++    G
Sbjct: 20  YSEVPRSIRLHSSIGLAVLLASFGGFGYWAGTAPLSSAIIAQGSFVATGNNKVVQHLEGG 79

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           IIK+  V  G  +  G  LLT +         +  L+++ ++ +   +  E         
Sbjct: 80  IIKEMMVSEGDTVKVGDVLLTLDKTTALANERMFQLRRLRLETIVTRLRAEAQGEKSFKV 139

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              V+++A +   + ++        + + VF+  +  +   L +    ++S+       +
Sbjct: 140 PDIVMKEASDPDIKSII-------QSQNVVFHSKLVKLDEQLNLINKNIKSLEFRFAGYD 192

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +       L+   ++    + L +   + + D+   ER +  +  ++     E      
Sbjct: 193 GQKQSFDRQLALLTQERDSKERLAKDGVIRKTDMLALERAIADAMGDIARLTGEMNQSEA 252

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I +   EA +      +     LE  +        ++    +  E+  I SP+ GT++ 
Sbjct: 253 EIAKFKQEAVIAVNANKQAALDALEIAESDLDSVREQVRGAAEVLERTVIRSPVNGTVIR 312

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +        +P+M+I+P      + A+V    I  + +G TA +R           
Sbjct: 313 AYYHTPGGVITTGKPIMEILPAHVPLILEAQVLRTSIDQLHEGQTAAIRLSALNRRTTPV 372

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
               +  +     +++  LQ ++ Y V ++I+D   +  +N     G PA+VL      T
Sbjct: 373 LNGKVFYVSADSIEENAGLQVKDVYIVRVQISDEEIAKVHNFHPVPGMPADVLIQTSERT 432

Query: 422 LAQEIIHPITDNWPKIFE 439
             + +  PI D+  + F+
Sbjct: 433 FFEYLTKPIADSMSRAFK 450


>gi|227328573|ref|ZP_03832597.1| HlyD family secretion protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 453

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 74/426 (17%), Positives = 157/426 (36%), Gaps = 15/426 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + +  + P S++          +  I W+ L  I+      G+ +    + +I++   GI
Sbjct: 30  RAMAEDSPRSIRFTLWAIGAFFLFFILWAGLANIDEVTRGDGKAIPSSRLQKIQNLEGGI 89

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  +  G  +  G PLL  +D      +   +     L   I+   +    +N +  V
Sbjct: 90  ITEVFIREGQVVNAGDPLLRLDDTRFASNVGETEADRLALLSRIERLNAE---INGQELV 146

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L +   ++  ++     + +++  +  +  IS +   L  +   +R       D   K  
Sbjct: 147 LSEEITTQAPKIAAGEKELYNSRRQQLHNEISGLEEQLIQRQQELR-------DFSAKEI 199

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             R  L   Q+++ M + L  + A+S+ ++ +  R   ++  +L             I E
Sbjct: 200 QFRNSLGLLQQEIKMSEPLIAEGAISKVEVLRLRRAEVETRGQLDSIKLSIPRAESAIKE 259

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++     + Y  E    L + Q +     +    LE    +  ++SP+ G +      
Sbjct: 260 SENKIEETRSRYKSEALSQLSEAQTSLNKIEATGKALEDRVNRTLVVSPVRGIVQQVLVN 319

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    L++IVP      + AK+ P+ I  +  G  A ++   Y        K  
Sbjct: 320 TIGGVIQPGSDLVEIVPLDDKLLVEAKIRPQDIAFLHPGQDAIIKLTAYDYTIYGGLKGQ 379

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I P         +   +Y + L+     L  +D  + +  G  A V       T+  
Sbjct: 380 LEQISPDTVTD---KEGNSFYIIRLRTDKNYLGSADKPLLIIPGMVASVDIITGKKTILS 436

Query: 425 EIIHPI 430
            ++ PI
Sbjct: 437 YLLKPI 442


>gi|330965632|gb|EGH65892.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 445

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 150/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +       +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQLVKEGEPLFRLDQTQVQADVQSLGAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VRFPAELIAAG---QGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S ++ L  ++ L +   +  N L + +R + +    L +N  E   
Sbjct: 185 GMRRARSDLLAQADSLRQQLRNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      +  ++  + I  V       + F  +   R
Sbjct: 305 AVNMGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D A    N + ++ G PAE+     
Sbjct: 365 TPRVAGEVSLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|330889695|gb|EGH22356.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 445

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 71/439 (16%), Positives = 152/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G    +G PL   +  +    +   +   +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQSGKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           ++   +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VHFPAELIAAG---QGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S +K L+ ++ L +   +  N L + +R + +    L +N  E   
Sbjct: 185 GMRRARSDLLAQADSLRKQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      +  ++  + I  V       + F  +   R
Sbjct: 305 AVNLGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D A    N + ++ G PAE+     
Sbjct: 365 TPRVSGEVNLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|157377273|ref|YP_001475873.1| HlyD family type I secretion membrane fusion protein [Shewanella
           sediminis HAW-EB3]
 gi|157319647|gb|ABV38745.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           sediminis HAW-EB3]
          Length = 460

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 168/448 (37%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P S + +        +  + W+    ++   +  G+++    +  I+
Sbjct: 12  MVDDVYGAMMTDAPTSHRLIIWALSAFALCFVLWAYFSKLDQVTTGMGKVIPSSQIQVIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSAL 117
           S   GI+++  VE G  + +G  L+  +D       D ++  + +L+     ++ E +++
Sbjct: 72  SLDGGIMQELYVEEGMHVTKGQALVRIDDTRFRSEFDQQEQEVFSLQANVKRLEAELNSI 131

Query: 118 DFLNNKYDVLEKAFESREE-----QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
              +   +  E+   ++       +L++   +     S+ ++  + S+   L++   +++
Sbjct: 132 IISDMSSNWREQVKITKTPLLFSGELIEKEPELVKRQSEEYSGRMDSLSNQLEILARQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +L +K + L        ++L + K L EK  V + +L + ER V     EL  
Sbjct: 192 QKQQETEELASKINTLTRSFQLISRELELTKPLAEKGIVPEVELLKLERTVNDIQGELSS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +    +E   +       +  E    L + Q   +         +    +  I
Sbjct: 252 LRLLRPKVKASQDEAILKRREAVFVFAAETRTQLNEMQTKLSRMSEAQVGAQDKVSKAEI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GTI      +     Q    +++IVP      I  K+ PK I  +  G  A V+ 
Sbjct: 312 TSPVNGTIKSIHITTLGGVVQPGIDILEIVPSEDQLLIETKIVPKDIAFLHPGLPAVVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R      ++E I    +Q +       +Y V ++    +   ++   + +  G 
Sbjct: 372 TAYDFTRYGGLNGVVEHISADTTQDEE---GNSFYLVRVRTELSSLKKDDGTEMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTSVDVITGQRSVLEYILNPILRAKDTA 456


>gi|331017234|gb|EGH97290.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 445

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 150/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +       +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQLVKEGEPLFRLDQTQVQADVQSLGAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VRFPAELIAAG---QGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S ++ L  ++ L +   +  N L + +R + +    L +N  E   
Sbjct: 185 GMRRARSDLLAQAESLRQQLRNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      +  ++  + I  V       + F  +   R
Sbjct: 305 AVNMGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D A    N + ++ G PAE+     
Sbjct: 365 TPRVAGEVSLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|70730571|ref|YP_260312.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas
           fluorescens Pf-5]
 gi|68344870|gb|AAY92476.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas
           fluorescens Pf-5]
          Length = 438

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 72/438 (16%), Positives = 165/438 (37%), Gaps = 14/438 (3%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           +  + ++R+     +   +L+++G      W+ L P++  +   G ++       ++S  
Sbjct: 7   YAPERVERDAGFFARMGWILALVGAGSFFVWAALAPLDQGIPVQGTVVVSGKRKAVQSMS 66

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFL 120
           SG++ +  V  G  + QG PL   +  +    +   +   +          +E+  L  +
Sbjct: 67  SGVVSRILVREGESVKQGQPLFRLDQTQVAADVQSLQAQYRMAMASLARWRSERDNLKQV 126

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +     L  + + R   +L+   +  S+  + F+   + +  +++    ++  +   R D
Sbjct: 127 DFPAP-LSDSDDPRLALVLEGQRQLFSSRREAFSREQAGIRANIEGATAQLAGMRRARTD 185

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L +++  LR  LS        ++ L +   + +N L + +R + +   EL +N  E   +
Sbjct: 186 LGSQAESLRQQLS-------NLQPLADNGYIPRNRLLEYQRQLSQVQQELAQNTGESGRV 238

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            + I E   +       Y KE+   L + Q        +LT      +   I++   G  
Sbjct: 239 EQGILESRLKLQQHSEEYQKEVRSQLAEAQLKTQTLEQQLTSAGFDLQHSEIIATADGIA 298

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V     +     +Q + L++IVP      +  ++    +  V       + F  +   R 
Sbjct: 299 VNLGVHTEGAVVRQGETLLEIVPQGTHLEVEGRLPVNLVDKVGTHLPVDILFTAFNQSRT 358

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKN 419
            +    +  I     Q  +      YY +   ++D A    N + ++ G PAE+      
Sbjct: 359 PRVPGEVSLISAD--QMLDEKTGMPYYVLRSSVSDQAMEKLNGLVIKPGMPAEMFVRTGE 416

Query: 420 TTLAQEIIHPITDNWPKI 437
            +L   +  P+ D     
Sbjct: 417 RSLLNYLFKPLLDRAGSA 434


>gi|293604655|ref|ZP_06687056.1| LapA secretion membrane fusion protein [Achromobacter piechaudii
           ATCC 43553]
 gi|292816942|gb|EFF76022.1| LapA secretion membrane fusion protein [Achromobacter piechaudii
           ATCC 43553]
          Length = 473

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 66/430 (15%), Positives = 149/430 (34%), Gaps = 13/430 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++ +   S + +  ++++    L+ W+    I+  V   G+++    V  I+S   GI++
Sbjct: 54  IQESQARSSRVLLWVALLATFLLLIWAATGSIDEVVRGEGKVVPSRQVQIIQSLDGGIVE 113

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++  G  LL  +       +        +L       ++             
Sbjct: 114 EILVRPGQEVEAGQTLLKIDSTRFASSLGENNAEYLSLLAKSARLQALATGEPF------ 167

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                  E++L             +    + +  ++ +   +++    +  +   K    
Sbjct: 168 ----VAPEEVLKQAPGLVEMERNAWQARNTELNATINVAREQLKQRQEDLRETIAKRDQA 223

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A      ++L + + L +  AVS+ DL + +R V +   E +    +       I E  
Sbjct: 224 SASCGLTSRELQVTRPLLKSGAVSEVDLLRLQRDVARYCGEQKGAEAQIDRFQASIKEAQ 283

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +      N   +   +L +     +        L    +   + +P+AGTI    + + 
Sbjct: 284 SKLEESELNIRNQARSELSETNTKLSTLRQGKLALADRVKLAEVRAPLAGTIKTLFNNTV 343

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q  + +++IVP      +  ++ P+ I  +     A V+F  Y        +  +E
Sbjct: 344 GGVVQPGKDIIEIVPKDDTLLLEVRIQPRDIGFLHADQKAEVKFTAYDFSIYGGLEGKVE 403

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           +I       +   +   YY V ++       D  + +  G  AEV       T+ Q ++ 
Sbjct: 404 QIGADTVTDE---KGNSYYVVRVRTDRSTVGDKLLPIIPGMVAEVHILTGKRTVLQYLLK 460

Query: 429 PITDNWPKIF 438
           PI       F
Sbjct: 461 PILRAKANAF 470


>gi|299134411|ref|ZP_07027604.1| type I secretion membrane fusion protein, HlyD family [Afipia sp.
           1NLS2]
 gi|298591158|gb|EFI51360.1| type I secretion membrane fusion protein, HlyD family [Afipia sp.
           1NLS2]
          Length = 438

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 72/433 (16%), Positives = 150/433 (34%), Gaps = 13/433 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R+    +    ++ I    G   W+ +  I  +V ++G I  + NV +++   +GI+ + 
Sbjct: 14  RSTRRHVIAGAIVLITLTCGFGGWAAITNIAGAVIATGTITVDSNVKKVQHLTAGIVGEL 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVL 127
            V +G ++  G  L+  +D      + +   S+  L      +  E+     ++    +L
Sbjct: 74  HVRDGDEVKAGQVLIRLDDTVPRANLAVIVKSLDELTAREARLTAERDGSHEISFPKRLL 133

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
             A  S    L+    +     S         +   +     ++R           +   
Sbjct: 134 SHAQSSEAAHLMAGETRLFIFRSDARQGQKKQLQEQIIQLREQIRGYI-------GQVEA 186

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +      QK++  +  L++KN V  + L   +R   +   E              I+E+
Sbjct: 187 GKRQNELIQKEIEGVGELWKKNLVPLSRLTALQREAARLDGENNRLTASIAESRGKISEI 246

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +      +   +++R+L + Q   A+   +    E   ++  I +P  G I      +
Sbjct: 247 ELKIIQIDQDLRSDVARELREIQGKIAELDERRIAAEDELKRIDIRAPQDGIIHELSVHT 306

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                   + ++ +VP         KV P+ I +V  G    +RFP +      +    +
Sbjct: 307 IGGVVSPGEQILLVVPDHDALMAETKVAPRDINNVSVGQRVVLRFPAFDIRTTPEINGTV 366

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKI-TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
             +    +Q         YY V ++I +D        +L  G P E        T     
Sbjct: 367 TIVSADATQDQK--SDASYYRVRIQIPSDEIRRLGKNKLVPGMPVESFIETTPRTALSYF 424

Query: 427 IHPITDNWPKIFE 439
           + P+ D   K F 
Sbjct: 425 VKPLRDQITKAFR 437


>gi|115525511|ref|YP_782422.1| HlyD family type I secretion membrane fusion protein
           [Rhodopseudomonas palustris BisA53]
 gi|115519458|gb|ABJ07442.1| type I secretion membrane fusion protein, HlyD family
           [Rhodopseudomonas palustris BisA53]
          Length = 433

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 69/436 (15%), Positives = 159/436 (36%), Gaps = 11/436 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             + +    +    +L +I   G+  W+    +  +V   G ++ + NV +++    GI+
Sbjct: 3   PARESIHRYMIAGVVLVMIVTFGIGGWAATAQLSGAVIGQGVVVVDSNVKKVQHATGGIV 62

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKY 124
            + +V++G ++  G  L+  +  +T     +    +  L   +  ++TE+  +D +    
Sbjct: 63  GELRVKDGDRVAAGDVLIRLDATQTLASATIVTKGLDELLARQARLETERDDIDQIVFPP 122

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +LE+  +   E      G+  +    +F+    S          R   +         +
Sbjct: 123 ALLERIRDGHSEA-----GRATAAERTLFDLRRQSRSGQKAQLKERSAQLQEEIKGYVGQ 177

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           ++  +  +   +K+L  +++L+EKN V    L   ER   +   E              I
Sbjct: 178 AAAKQREVEFIRKELDGVRSLWEKNLVPITRLTALERDSARLDGERSHLSGLIAQAKGKI 237

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E+  +      +   E+ +DL + +   ++   + T       +  I +P AG +    
Sbjct: 238 AEIELQTLQIDQDLRSEVGKDLIETRSKLSELSERKTAAVDQLYRIDIRAPQAGHVHQLA 297

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        + +M IVP +    +  K+ P+ I  V  G TA +RF  +      +  
Sbjct: 298 VHTVGGVIAPGEQIMLIVPEADALAVEVKIAPRDIDQVYMGQTAMMRFAAFDQKTTPEVD 357

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLA 423
             +  +   ++          YY   + +     +     +L  G P +V       T  
Sbjct: 358 GEVTMVSADLTTDQK--SGTSYYTAKVALKQDELTKLGRAKLMPGMPVDVFIKTAGRTAL 415

Query: 424 QEIIHPITDNWPKIFE 439
             ++ P+ D   +  +
Sbjct: 416 SYLMKPLRDQAERALK 431


>gi|3646414|emb|CAA07700.1| eprE protein [Pseudomonas tolaasii]
          Length = 437

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 69/432 (15%), Positives = 157/432 (36%), Gaps = 14/432 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R+    +K   LL+++G  G   W+ L P++  +   G ++       +++   G++ +
Sbjct: 12  ERDAGFFVKMGWLLTVVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTLSPGVVSR 71

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDV 126
             V+ G  + QG PL   +       +   +   +          +E+     +    D 
Sbjct: 72  ILVKEGEWVKQGQPLFRLDQTRNQADVQSLQAQYRMAWASVARWQSERDNQAAVTFPAD- 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L    +     +L+   +  S+  + F    + +  +++   +++  +   R DL  ++ 
Sbjct: 131 LSANPDPALALVLEGQRQLFSSRREAFAREQAGIRANIEGATSQLGGMRRARTDLTAQAQ 190

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LR  L+        ++ L +   + +N L   +R + +   +L +N  E   + + I E
Sbjct: 191 SLRDQLA-------NLQPLADNGYIPRNRLLDYQRQLSQVQQDLAQNAGESGRVEQGILE 243

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +       Y KE+   L   Q        +LT      +   I +P  G  V     
Sbjct: 244 SRLKLQQHSEEYQKEVRSQLADAQLRSLTLEQQLTSAGFDLQHSEINAPADGIAVNLGVH 303

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +  + L++IVP      +   +    +  V       + F  +   R  +    
Sbjct: 304 TEGAVVRAGETLLEIVPQGTRLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGE 363

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  I     Q  +    Q YY +   +++ A +  + + ++ G PAE+       +L   
Sbjct: 364 VSLISAD--QMLDEKTGQPYYVLRTSVSEDALAKLHGLVIKPGMPAEMFVRTGERSLLNY 421

Query: 426 IIHPITDNWPKI 437
           +  P+ D     
Sbjct: 422 LFKPLLDRAGSA 433


>gi|253689432|ref|YP_003018622.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251756010|gb|ACT14086.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 453

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 71/433 (16%), Positives = 158/433 (36%), Gaps = 15/433 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + +  + P S++          +  I W+ L  I+      G+ +    + +I++   GI
Sbjct: 30  RAMAEDSPRSIRFTLWAIGAFFLFFILWAGLADIDEVTRGDGKAIPSSRLQKIQNLEGGI 89

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  +  G  +  G PLL  +D      +   +     L   I+   +    +N++  V
Sbjct: 90  VTEVFIHEGQVVNAGDPLLRLDDTRFASNVGETEADRLALLSRIERLNAE---INDRELV 146

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L +   ++  ++     + +++  +  +  +S +   L  +   +R       D   K  
Sbjct: 147 LSEEITTQAPKIAAGEKELYNSRRQQLHNEVSGLEEQLIQRRQELR-------DFSAKEI 199

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             R  L   Q+++ M + L  + A+S+ ++ +  R   ++  +L             I E
Sbjct: 200 QFRNSLGLLQQEIKMSEPLIAEGAISKVEVLRLRRAEVETRGQLDSIKLSIPRAESAIKE 259

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++     + Y  E    L + Q       +    LE    +  ++SP+ G +      
Sbjct: 260 SENKIEETRSRYKSEALSQLSEAQTNLNKIEATGKALEDRVNRTLVVSPVRGIVQQVLVN 319

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    L++IVP      + A++ P+ I  +  G  A ++   Y        K  
Sbjct: 320 TIGGVIQPGSDLVEIVPLDDKLLVEARIRPQDIAFLHPGQDAVIKLTAYDYTIYGGLKGQ 379

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I P         +   +Y + L+     L  +D  + +  G  A V       T+  
Sbjct: 380 LEQISPDTVTD---KEGNSFYIIRLRTDKNYLGSADKPLLIIPGMVASVDIITGKKTILS 436

Query: 425 EIIHPITDNWPKI 437
            ++ PI     + 
Sbjct: 437 YLLKPIIRAKAEA 449


>gi|1208448|dbj|BAA12016.1| metalloprotease transporter [Serratia marcescens]
          Length = 443

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 78/427 (18%), Positives = 166/427 (38%), Gaps = 13/427 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             L+    L ++G  G + W +L P++  V  SG ++   N   ++ P  G++ + QV  
Sbjct: 22  RHLRLGGWLVLLGFGGFLLWGLLAPLDKGVPVSGSVVVAGNRKAVQHPSGGVVSQIQVHE 81

Query: 75  GSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           G ++  G  LL  + +++    D +  +++S    +  +  E+  L  +     +  +  
Sbjct: 82  GDRVRAGQVLLLMDTVDSRTQRDALRSQQLSNAAQQARLQAERDGLHAIVFPALLQARRE 141

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E     L+    +  ++        ++++  S+      +  I  +    + + ++L   
Sbjct: 142 EPEVMSLMLLQQQLFTSRRAALQSELAAIAESIAGSQAMLEGIRQSYASKQRQKAML--- 198

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               Q+ L  M+ L  +  V++N L   E    +   +  E+      + R I EL   A
Sbjct: 199 ----QEQLGGMRKLAAQGYVARNRLLDLEGQYAQIDGQASEDTGNIGRLGRQILELKLRA 254

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 Y KE+S  L + +    +  ++L   E       + + +AGT+V    F+    
Sbjct: 255 IQRREEYQKEVSSQLAEVRMKLDELDNRLAKAEADLGHTQVKASVAGTVVGLSVFTEGGV 314

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               Q LM+IVP  +   + A++  + I  V+ G    + F  +      + +  +  + 
Sbjct: 315 IGAGQQLMEIVPSDRGLQVEARIPVELIDKVQVGLPVELLFSAFNPSTTPRVEGEVTLVG 374

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                 +       YY V  K+++      N +E+R G P E        ++   +  P+
Sbjct: 375 ADRLTDEK--SGAPYYSVRAKVSEAGLQRLNGLEIRPGMPVEGFIRTGERSMMNYLFKPL 432

Query: 431 TDNWPKI 437
           TD     
Sbjct: 433 TDRLHLA 439


>gi|227112899|ref|ZP_03826555.1| HlyD family secretion protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 453

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 74/433 (17%), Positives = 159/433 (36%), Gaps = 15/433 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + +  + P S++          +  I W+ L  I+      G+ +    + +I++   GI
Sbjct: 30  RAMAEDSPRSIRFTLWAIGAFFLFFILWAGLANIDEVTRGDGKAIPSSRLQKIQNLEGGI 89

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  +  G  +  G PLL  +D      +   +     L   I+   +    +N +  V
Sbjct: 90  ITEVFIREGQVVNAGDPLLRLDDTRFASNVGETEADRLALLSRIERLNAE---INGQELV 146

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L +   ++  ++     + +++  +  +  IS +   L  +   +R       D   K  
Sbjct: 147 LSEEITTQAPKIAAGEKELYNSRRQQLHNEISGLEEQLIQRQQELR-------DFSAKEI 199

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             R  L   Q+++ M + L  + A+S+ ++ +  R   ++  +L             I E
Sbjct: 200 QFRNSLGLLQQEIKMSEPLIAEGAISKVEVLRLRRAEVETRGQLDSIKLSIPRAESAIKE 259

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++     + Y  E    L + Q +     +    LE    +  ++SP+ G +      
Sbjct: 260 SENKIEETRSRYKSEALSQLSEAQTSLNKIEATGKALEDRVNRTLVVSPVRGIVQQVLVN 319

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    L++IVP      + AK+ P+ I  +  G  A ++   Y +      K  
Sbjct: 320 TIGGVIQPGSDLVEIVPLDDKLLVEAKIRPQDIAFLHPGQDAIIKLTAYDNTIYGGLKGQ 379

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I P         +   +Y + L+     L  +D  + +  G  A V       T+  
Sbjct: 380 LEQISPDTVTD---KEGNSFYIIRLRTDKNYLGTADKPLLIIPGMVASVDIITGKKTILS 436

Query: 425 EIIHPITDNWPKI 437
            ++ PI     + 
Sbjct: 437 YLLKPIIRAKAEA 449


>gi|237731512|ref|ZP_04561993.1| type I secretion membrane fusion protein [Citrobacter sp. 30_2]
 gi|226907051|gb|EEH92969.1| type I secretion membrane fusion protein [Citrobacter sp. 30_2]
          Length = 443

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 80/442 (18%), Positives = 170/442 (38%), Gaps = 12/442 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H+     +  N  + + R  ++ ++G+   I W++  P++  V + G +    N   I+ 
Sbjct: 8   HNTASAGVDTNIWSPIIRGVIVIVLGVGSFIFWAVQAPLDAGVVADGTVTVSSNRKTIQH 67

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALD 118
              G +    ++ G  + +   L+  + ++       ++ + +S K++   +  E+  L+
Sbjct: 68  LSGGRVTDIFIKEGDFVKKNQVLVRLDKMQLEMRFSALNAQYISAKSIEDRLLAERDGLE 127

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +     + ++   ++       L +  +  +K+F+    ++   L M    +  +    
Sbjct: 128 AIVFNTTLTQQFSGNKR------LTEVRNLQAKLFDTRRKTIQDELSMIEETLDGLVGQT 181

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            +L           S   ++L  ++ L EKN   +  L   ER   + +  + E+I    
Sbjct: 182 DNLNKIKGYRDHQFSLINRELGAIRALSEKNYYPKAQLLVLEREAAEISGSVSEDILNIA 241

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +    NEL  +A      YL+E+  +L +NQ+  A    +L       +   I SPI G
Sbjct: 242 KLKSQQNELKIKAYQVRHQYLREVESELTENQKEVAMLEDELVSTRHELDNTEIRSPING 301

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +  +     Q  + LM IV   +   I AK+    I  +  G T  V FP     
Sbjct: 302 IVLDVKVSTVGGVIQPGEHLMDIVAAGQPMQIDAKIPVHAIDKLVPGLTVDVLFPALNHA 361

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTA 417
                 A +  I       +     Q YY   ++++ + A    + +++ G PA V    
Sbjct: 362 LLPSVPARVLTISADRLIDEATQ--QPYYLAEVQVSAEGARLLGDYKIKAGMPASVTIKT 419

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
              TL   +  P+       F+
Sbjct: 420 GERTLMSYLFKPLIARLELAFK 441


>gi|163748692|ref|ZP_02155945.1| HlyD family secretion protein [Shewanella benthica KT99]
 gi|161331802|gb|EDQ02606.1| HlyD family secretion protein [Shewanella benthica KT99]
          Length = 460

 Score =  330 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 71/448 (15%), Positives = 164/448 (36%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P   + +       I+  + W+    ++   +  G+++    +  I+
Sbjct: 12  MVDDVYGAMMTDAPTIHRLIIWSLAAMIVCFLVWAYFSELDQVTTGMGKVIPSSQIQMIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSAL 117
           S   GI+++  V+ G  + +G  L+  +D       D +   + +L+     + +E +++
Sbjct: 72  SLDGGIMQEMYVKEGMMVTKGQALMRIDDTRFRSDYDQQAQEVYSLQANVVRLSSELASI 131

Query: 118 DFLNNKYDVLEKAFESREE-----QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
              +   D  E+   +        +L+          S  ++  + S+   L++   +++
Sbjct: 132 TITSMSVDWREQVKITPRPLQFPGELIQQEPALVQRQSNEYSGRLDSLINQLEILARQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +L +K   L        ++L + K L +K  V + +L + ER+V     EL  
Sbjct: 192 QKQQESKELASKIDTLSRSYQLVSRELELTKPLADKGIVPEIELIKVERVVNDIRGELAS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +    +E   +      N+  +    L + Q   +              +  I
Sbjct: 252 LRLLRPKLKASQDEAILKRREAVLNFAVDARTQLNELQTKLSRMNEAQVGARDKVNKAVI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GTI      +     Q    +++IVP      I  K+ PK I  +  G  A V+ 
Sbjct: 312 KSPVNGTIKTIHINTLGGVVQPGIDIIEIVPSDDQLLIETKILPKDIAFLHPGLPAIVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R      ++E I    +Q +       +Y V ++    + + ++   + +  G 
Sbjct: 372 TAYDFTRYGGLNGVVEHISADTTQDEE---GNSFYLVRVRTDLSSLTKDDGTKMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTSVDVITGKRSVLEYILNPILRAKDTA 456


>gi|221066205|ref|ZP_03542310.1| type I secretion membrane fusion protein, HlyD family [Comamonas
           testosteroni KF-1]
 gi|220711228|gb|EED66596.1| type I secretion membrane fusion protein, HlyD family [Comamonas
           testosteroni KF-1]
          Length = 470

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 78/417 (18%), Positives = 159/417 (38%), Gaps = 13/417 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              + +  ++++ ++ L+ W+ L  I+  V   G+++    V  ++S   GI+K+  V  
Sbjct: 57  RGSRLLIWVALVTVLVLVLWACLGRIDEVVRGQGKVVPSRQVQVVQSLDGGIVKEILVHP 116

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + QG  +L  +    +  +   K  +  L+      ++       K     +A    
Sbjct: 117 GEHVEQGQVILRIDPTRYSSSLGENKAELLALKAKAARLQALASGEPFKAPEDVQALAP- 175

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             QL++   +   + S+  N  ++     L+ +   +R    NR    +  SL       
Sbjct: 176 --QLVEMERRMWESRSQELNTNVNIARDQLRQRQQELRETQANRDQASSSCSL------- 226

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++L++ + L +  AVS+ DL + +R V +   E +    +   +   I E   +    
Sbjct: 227 TSEELSVTRPLLKSGAVSEVDLLRLQRDVARFCGEAKAAGAQIGRIQAAIQEAERKIQES 286

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N   +   DL   Q            LE   +   + SP+ GT+    + +     Q 
Sbjct: 287 ELNMRNQSRSDLSDTQAKLGTLEQGKVALEDRVKLAEVRSPVRGTVNTLMANTVGGVVQP 346

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + ++ IVP      +  +V P+ I  +  G  A V+F  Y        +  +E+I    
Sbjct: 347 GKDILDIVPLDDTLLMEVQVNPRDIGFLHFGQQAEVKFTAYDFAIYGGLQGKLEQIGANT 406

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
              +   +   +Y V ++       D++  +  G  AEV       TL Q ++ PI 
Sbjct: 407 VTDE---KGNSFYVVKVRTDKAHVGDDSRPIIPGMQAEVHILTGKRTLMQYLLKPIL 460


>gi|114561621|ref|YP_749134.1| type I secretion membrane fusion protein, HlyD family protein
           [Shewanella frigidimarina NCIMB 400]
 gi|114332914|gb|ABI70296.1| type I secretion membrane fusion protein, HlyD family protein
           [Shewanella frigidimarina NCIMB 400]
          Length = 460

 Score =  330 bits (845), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 74/448 (16%), Positives = 170/448 (37%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P+  + +       ++    W+    ++   S +G+++    +  I+
Sbjct: 12  MVDDVYGAMMTDAPSGHRLIIWSLAAMMVCFFIWAYFSELDQVTSGTGKVIPSSQIQIIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI+++  V+ G  + +G PL   +D       D ++  +  L+ +I   ++ LD +
Sbjct: 72  SLDGGILQEIYVQEGGIVTKGQPLARIDDTRFRSDFDQQEQEVFGLQTNIIRMRTELDSI 131

Query: 121 N--------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                     +   + K      + ++D   +      + ++  + ++   L++ + +++
Sbjct: 132 IISDMSSDWRQQVKITKQNLVFPQTIIDEEPELVKRQQEEYSIRLDNLSNQLEILVRQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +L ++ S L        ++L + + L  K  V + +L + ER V     EL+ 
Sbjct: 192 QRQQEIEELASRISTLTTSYQLVSRELELTRPLARKGIVPEVELLKLERTVNDIQGELQS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +   ++E   +       Y  ++   L + Q   +              +  I
Sbjct: 252 VRLLRPKVKASMDEAILKRREAVFVYATDLRAQLNEMQTKLSRMNQAQKGAFDKVSKAVI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GTI      +     Q  + +M+IVP      I  K+TPK I  +  G  A V+ 
Sbjct: 312 ASPVIGTIKKINFNTLGGVVQPGEEIMEIVPSEDKLLIETKITPKDIAFLHPGLPAIVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R    K  +E I    SQ +       +Y V ++  + +   ++   + +  G 
Sbjct: 372 TAYDFTRYGGLKGTVEHISADTSQDEE---GNSFYIVKVRTQESSLMKDDGTEMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTSVDVITGKKSILEYILNPILRAKDTA 456


>gi|330875819|gb|EGH09968.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 445

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 150/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +       +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQLVKEGEPLFRLDQTQVQADVQSLGAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VRFPAELIAAG---QGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S ++ L  ++ L +   +  N L + +R + +    L +N  E   
Sbjct: 185 GMRRARSDLLAQADSLRQQLRNLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPAGGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      +  ++  + I  V       + F  +   R
Sbjct: 305 AVNMGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D A    N + ++ G PAE+     
Sbjct: 365 TPRVAGEVSLISADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|296274056|ref|YP_003656687.1| HlyD family type I secretion membrane fusion protein [Arcobacter
           nitrofigilis DSM 7299]
 gi|296098230|gb|ADG94180.1| type I secretion membrane fusion protein, HlyD family [Arcobacter
           nitrofigilis DSM 7299]
          Length = 478

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 83/427 (19%), Positives = 160/427 (37%), Gaps = 7/427 (1%)

Query: 14  PASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P  L  +  L II    + I W+    I+      G+++  D + +I+S   GII +  V
Sbjct: 52  PTKLANVLFLFIISFFTIAIIWAAFAEIDELARGQGKVIPTDKIQKIQSLDGGIISEILV 111

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G  + +GTPL+  +       ++  K         +   K  L+  +N     E    
Sbjct: 112 KEGQVVKKGTPLMKIDTTRFQATLEESKQEY----LSLLAVKVRLEVESNIDINKELPTL 167

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              +++++   +Y      +     + +  S+K+   ++        ++EN    L    
Sbjct: 168 VFPKEVMNDPSRYDILEKSLLVNRFNELKSSVKVLENQVGQKEQELKEIENTIKNLSKSY 227

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +  ++    ++ L  +   S+ DL   E+   K+T +L   +   K     INE      
Sbjct: 228 NIIKEQRVTIQRLVNRGVKSKYDLLDVEKEYNKTTGDLEAALLSVKRSKLAINEAKSRIT 287

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            +   +  E S+ L++   +     +K+   +    + TI SP+ G +      +     
Sbjct: 288 EKINTFKAEASKKLQETASSINKFEAKMVGDKDKVAKTTITSPVDGIVKELYYNTIGGVV 347

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           Q    LM+IVP S +  + AK++PK I  +     A V+   Y        K  I +I  
Sbjct: 348 QPGVDLMEIVPESDVLVVEAKISPKDIAFINPSQKAIVKITAYDFSIYGGLKGKIIEISA 407

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                  + + + YY V++K        N   + +  G  A V       T+   I+ PI
Sbjct: 408 DSIVDKESKEGKSYYRVLVKTNKNYLERNGVKLPIIPGMVATVDIITGKKTILDFILKPI 467

Query: 431 TDNWPKI 437
                  
Sbjct: 468 LKTKDNA 474


>gi|4115626|dbj|BAA36464.1| Membrane fusion protein (MFP) [Pseudomonas fluorescens]
          Length = 444

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 65/440 (14%), Positives = 153/440 (34%), Gaps = 14/440 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
             +   + +       +   LL+++G  G   W+ L P++  +   G ++       +++
Sbjct: 11  RDYEQTHPEHGARFFARMGWLLTVVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQT 70

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALD 118
              G++ +  V  G  + QG PL   +  +    +   +   +          +E+    
Sbjct: 71  LSPGVVSRILVREGEAVKQGQPLFRLDQTQNQADVHSLQAQYRMAWASVARWQSERDNQS 130

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +    + L    +     +L+   +  S+  + F    + +  +++    ++  +   R
Sbjct: 131 TITFPAE-LSGNPDQALALVLEGQRQLFSSRREAFAREQAGIRANIEGATAQLNGMRRAR 189

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            DL  ++  LR         L  ++ L +   + +N L + +R + +   +L +N  E  
Sbjct: 190 SDLTAQAQSLR-------DQLNNLQPLADNGYIPRNRLMEYQRQLSQVQQDLAQNTGESG 242

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            + + I E   +       Y KE+   L   Q        +LT      +   I +P  G
Sbjct: 243 RVEQGILESRLKLQQHSEEYQKEVRSQLADAQLRSLTLEQQLTSAGFDLQHSEINAPADG 302

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
             V     +     +  + L++IVP      +  ++    +  V       + F  +   
Sbjct: 303 IAVNLSVHTEGAVVRAGETLLEIVPQDTRLEVEGRLPVHLVDKVGTHLPVDILFTAFNQS 362

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
           R  +    +  I     Q  +      YY +   ++  A    + + ++ G PAE+    
Sbjct: 363 RTPRVPGEVSLISAD--QMLDEKTGMPYYVLRTTVSSSALEKLHGLVIKPGMPAEMFIRT 420

Query: 418 KNTTLAQEIIHPITDNWPKI 437
              +L   +  P+ D     
Sbjct: 421 GERSLLNYLFKPLLDRAGSA 440


>gi|238791581|ref|ZP_04635219.1| protease secretion protein prtE [Yersinia intermedia ATCC 29909]
 gi|238729197|gb|EEQ20713.1| protease secretion protein prtE [Yersinia intermedia ATCC 29909]
          Length = 443

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 73/435 (16%), Positives = 173/435 (39%), Gaps = 13/435 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + ++R+   +L     L + G  G I W++L P++  V  +G ++   N   I+ P  GI
Sbjct: 14  QEIQRSENRALYWGWGLVLAGFGGFILWALLAPLDKGVPITGTVVVSGNRKAIQHPEGGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNK 123
           +    V +G +++ G  LLT   +    + D    +   +      +  E+     L   
Sbjct: 74  VDHIMVHDGDRVVAGEVLLTLNAVRARSVSDGLTSQYYQLLANEARLLAEQKGDKQLVET 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             + +   ++  +++L        +  +        +  ++      M +         +
Sbjct: 134 PRLQQVKRQTGMDEMLALQQLLLDSRQQALQLESDGLRANIAGLQAAMGAQKQVLGSKNS 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +   L   L         +K+L ++N V +N + + +++  +   E+ + + E K + R 
Sbjct: 194 QKQALSQQLD-------GLKSLADENYVPRNKMLESKQLYAQLNGEIAQIVGEIKRVERE 246

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I E      L    Y KE++  + + Q T  +  S+L           + SP+AGT+V  
Sbjct: 247 IQEQNFRIQLRQQEYRKEVNTQMAEVQSTITEVFSQLEKANFDLANIQMRSPVAGTVVEM 306

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           + F+        Q LM+I+P  +  ++ A+V  + +  +  G    ++F  +      K 
Sbjct: 307 KVFTEGGVIAAGQSLMEILPDDQPLFVDARVPVEMVDKIHSGLAVELQFTAFNQSTTPKV 366

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
           +  ++ +       +     + YY + +++++ A    +++E++ G P +        ++
Sbjct: 367 EGTVKLLSADRILDERTQ--EPYYSLRVEVSEAARQKLDHLEIKPGMPVQGFVRTGERSM 424

Query: 423 AQEIIHPITDNWPKI 437
              +  P+ D     
Sbjct: 425 INYLFKPLMDRLHIA 439


>gi|312960980|ref|ZP_07775485.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
 gi|311284638|gb|EFQ63214.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
          Length = 429

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 65/432 (15%), Positives = 153/432 (35%), Gaps = 14/432 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R+    ++    L+++G  G   W+ L P++  +   G ++       +++   G++ +
Sbjct: 8   QRDARFFVRVGWWLTVVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTLSPGVVSR 67

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDV 126
             V  G ++ QG PL   +  +    +   +   +          +E+     +    + 
Sbjct: 68  ILVREGERVKQGQPLFRLDQTQNQADVQSLQAQYRMAWASVARWQSERDNQAGVTFPAE- 126

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L    +     +L+   +  S+  + F    + +  ++     ++  +   R DL  ++ 
Sbjct: 127 LSANPDPALALVLEGQRQLFSSRREAFAREQAGIRANIDGASAQLNGMRRARSDLTAQAQ 186

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LR         L  ++ L +   + +N L + +R + +   +L +N  E   + + I E
Sbjct: 187 SLR-------DQLNNLQPLADNGYIPRNRLMEYQRQLSQVQQDLAQNTGESGRVEQGILE 239

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +       Y KE+   L   Q        +LT      +   I +P  G  V     
Sbjct: 240 SRLKLQQHSEEYQKEVRSQLADAQLRSLTLEQQLTSAGFDLQHSEINAPADGIAVNLGVH 299

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +  + L++IVP      +   +    +  V       + F  +   R  +    
Sbjct: 300 TEGAVVRAGETLLEIVPQGTRLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGE 359

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  I     Q  +      YY +   +++ A    + + ++ G PAE+       +L   
Sbjct: 360 VSLISAD--QMLDEKTGAPYYVLRTTVSEAALEKLHGLVIKPGMPAEMFVRTGERSLLNY 417

Query: 426 IIHPITDNWPKI 437
           +  P+ D     
Sbjct: 418 LFKPLLDRAGSA 429


>gi|15598601|ref|NP_252095.1| metalloprotease secretion protein [Pseudomonas aeruginosa PAO1]
 gi|107102938|ref|ZP_01366856.1| hypothetical protein PaerPA_01004007 [Pseudomonas aeruginosa PACS2]
 gi|218890396|ref|YP_002439260.1| metalloprotease secretion protein [Pseudomonas aeruginosa LESB58]
 gi|254236364|ref|ZP_04929687.1| metalloprotease secretion protein [Pseudomonas aeruginosa C3719]
 gi|254242091|ref|ZP_04935413.1| metalloprotease secretion protein [Pseudomonas aeruginosa 2192]
 gi|9949542|gb|AAG06793.1|AE004761_9 metalloprotease secretion protein [Pseudomonas aeruginosa PAO1]
 gi|126168295|gb|EAZ53806.1| metalloprotease secretion protein [Pseudomonas aeruginosa C3719]
 gi|126195469|gb|EAZ59532.1| metalloprotease secretion protein [Pseudomonas aeruginosa 2192]
 gi|218770619|emb|CAW26384.1| metalloprotease secretion protein [Pseudomonas aeruginosa LESB58]
          Length = 443

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 67/431 (15%), Positives = 161/431 (37%), Gaps = 14/431 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L+ +     +    L ++G +G + W+ L P++  V  SG ++   +   ++ P  G+
Sbjct: 15  AALELDEKRFSRLGWGLVLLGFVGFLLWAGLAPLDKGVGVSGTVMVAGSRKAVQHPTGGL 74

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFLNNK 123
           ++  +V  G ++  G  LL  +  +     D            +     E+     +   
Sbjct: 75  VRHIRVHEGERVEAGQVLLEMDATQARAQADGLFAQYLAALASLARLSAERDEKARIEFP 134

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++L    + R   LL+   + H +  +     +  +  ++     ++  +       E 
Sbjct: 135 AELL-ALDDPRLPTLLEQQRQLHDSRRRALRLELDGLAETVAGSQAQLDGLQAALRSKEQ 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + + L       ++ L  ++ L  +  V +N L   ER++ +   E+  ++    +  R 
Sbjct: 194 QRAAL-------EEQLRGLRQLASEGYVPRNRLLDSERLLAQVNGEIAGDLGSLGSTRRQ 246

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I EL          + +E+   L   Q    +  ++L           + +P+AG +V  
Sbjct: 247 ILELRLRMAQRREKFQEEVRASLADAQVRAEELRNRLASARFDLANSEVRAPVAGLVVGQ 306

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           + F+        Q LM+I+P  +   + A++  + +  V+ G    + F  +      + 
Sbjct: 307 EVFTEGGVIAPGQQLMEILPERQPLLVDARLPVEMVDKVRVGLPVELMFSAFNQSTTPRV 366

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
           +  +  +       + +     YY V +++ +        +E+R G P E    +   +L
Sbjct: 367 EGEVTLVSADRLLDERSEA--PYYRVRIRVGEEGVRRLAGLEIRPGMPVEAFVRSGERSL 424

Query: 423 AQEIIHPITDN 433
              +  P+ D 
Sbjct: 425 LNYLFKPLADR 435


>gi|332716111|ref|YP_004443577.1| alkaline proteinase secretion protein [Agrobacterium sp. H13-3]
 gi|325062796|gb|ADY66486.1| alkaline proteinase secretion protein [Agrobacterium sp. H13-3]
          Length = 454

 Score =  329 bits (844), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 70/438 (15%), Positives = 165/438 (37%), Gaps = 11/438 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +  + R+          + +    G   W+   P+  ++ + G  +   N   ++    G
Sbjct: 22  YSEVPRSIRLHSSIGLAVLLASFGGFGYWAGTAPLSAAIIAQGSFVATGNNKVVQHLEGG 81

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           IIK+  V  G  + +G  LLT +         +  L+++ ++ +   +  E         
Sbjct: 82  IIKEMMVSEGDTVKEGDVLLTLDKTTALANERMFQLRRLRLETIVTRLRAEAQGQKSFKV 141

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              V+++A +   + ++        + + VF+  I  +   L +    ++S+       E
Sbjct: 142 PDIVMKEASDPDIKSII-------QSQNIVFHSKIVKLDEQLNLIEKNIKSLEFRYAGYE 194

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +       L+   ++    + L +   + + D+   ER +  +  ++     E      
Sbjct: 195 GQKQSFDRQLALLTQERDSKERLAKDGVIRKTDMLALERAIADAMGDIARLTGEMNQSEA 254

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I +   EA +      +     LE  +        ++    +  E+  I SP+ GT+V 
Sbjct: 255 EIAKFKQEAVIAINANKQAALDALETAEADLDSVREQVRGAAEVLERTVIRSPVNGTVVR 314

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               ++       +P+M+I+P      + A+V    I  + +G TA +R           
Sbjct: 315 AYYHTAGGVITTGKPIMEILPAHVPLILEAQVLRTSIDQLHEGQTAAIRLSALNRRTTPV 374

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
               +  +     +++  LQ ++ Y V ++++D   +  +N     G PA+VL      T
Sbjct: 375 LNGKVFYVSADSIEENAGLQVKDVYIVRVQVSDEEIAKVHNFHPVPGMPADVLIQTSERT 434

Query: 422 LAQEIIHPITDNWPKIFE 439
             + +  PI+++  + F+
Sbjct: 435 FFEYLTKPISESMSRAFK 452


>gi|127511245|ref|YP_001092442.1| HlyD family type I secretion membrane fusion protein [Shewanella
           loihica PV-4]
 gi|126636540|gb|ABO22183.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           loihica PV-4]
          Length = 460

 Score =  329 bits (843), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 71/442 (16%), Positives = 164/442 (37%), Gaps = 14/442 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P S + +           + W+    ++   + +G+++    V  I+
Sbjct: 12  MVDDVYGAMMTDAPTSHRLIIWALAALAFSFLVWAYFAELDRVTTGTGKVIPSSQVQVIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSAL 117
           S   GI+K+  V  G  + +G PL+  +D         ++  + +L+     +  E +++
Sbjct: 72  SLDGGIMKELYVREGMTVTKGQPLVRIDDTRFRSDFAQQEQEVYSLQANVIRLRAELNSI 131

Query: 118 DFLNNKYDVLEKAFESREE-----QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
              +   D  E+   +++      +L +            ++  + ++   L++   +++
Sbjct: 132 TISDVAADWREQVKIAKQPLQFPPELTESEHDLIERQRDEYSGRLDNLSNQLEILARQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +L +K + L        ++L + + L +K  V + +L + ER V     EL  
Sbjct: 192 QKQQETEELASKINTLTTSFQLVTRELELTRPLADKGIVPEVELLKLERNVNDIRGELSS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +    +E   +       Y  E    L + Q   +              +  I
Sbjct: 252 LRLLRPKLKASQDEAILKRREAVFVYAAEARTQLNEMQTRLSRINEAQVGARDKVSKAEI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GTI      +     Q    +++IVP      I  K+ PK I  +  G  A V+ 
Sbjct: 312 VSPVNGTIKTVHINTLGGVVQPGIDIIEIVPSEDQLLIETKIIPKDIAFLHPGLPAVVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R      ++E I    +Q +       +Y V ++    + + ++   + +  G 
Sbjct: 372 TAYDFTRYGGLNGVVEHISADTTQDEE---GNSFYLVRVRTELSSLTKDDGTLMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPIT 431
              V       ++ + I++PI 
Sbjct: 429 LTTVDVITGQRSVLEYILNPIL 450


>gi|218462618|ref|ZP_03502709.1| protein secretion protein, HlyD family [Rhizobium etli Kim 5]
          Length = 447

 Score =  329 bits (843), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 79/438 (18%), Positives = 170/438 (38%), Gaps = 10/438 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR+    +  +  LS+  + G+  W+    +  +V   G ++ + +V +I+ P  GI+ K
Sbjct: 10  KRSLNRHVAVVGALSLALVCGIGGWAATTELSSAVIGEGVVIVDGDVKKIQHPTGGIVSK 69

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV 126
             V     +  G  L+  +   T   + + + ++  L   R  +  E+   D    + ++
Sbjct: 70  LLVAENDHVSAGQVLIRLDGTTTKAQLSIVESTLAQLYARRARLKAERIGADSFKVEENI 129

Query: 127 LE----KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            +     A  S +    +          K+F+   S++        +R   +      L 
Sbjct: 130 SDLMTSSAAASNKAASRNAAQDLLDGEQKLFDSRRSALVGMKSQLASRKDQLAEQIKGLV 189

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            + +     LS  +++L  +  L++K  V+   LN  +R          + I  +     
Sbjct: 190 VQINATNDSLSLIEQELEGVDALYKKGLVTLQRLNALKRARADLQGNSGQEIAAKAEAEG 249

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              E+  ++     +   EI+++L   +   A+   +         +  I +P++G +  
Sbjct: 250 KAIEIDRQSIQLDEDRRSEIAKELTDVEAKIAENEERRETALDQLRRLDITAPLSGRVHE 309

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               + +   +  Q LM +VP +    ++AKV  + I  +  G +  VRF  +       
Sbjct: 310 LAVHTINGVIEPGQTLMLVVPENDDLTVQAKVATRDIDQLHVGQSVDVRFSAFDQRTTPD 369

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
            +A+I  I P   + +       YY + +K    + +   +I+L  G PAEV     + T
Sbjct: 370 VRAVITSIAPDTVKDERT--GISYYPLRVKPEAQSIAKLKSIKLYPGMPAEVFIKIADRT 427

Query: 422 LAQEIIHPITDNWPKIFE 439
           +   +  P+TD    +F 
Sbjct: 428 VISYLTKPLTDQMQHVFR 445


>gi|16265039|ref|NP_437831.1| HlyD family protein secretion protein [Sinorhizobium meliloti 1021]
 gi|2281441|gb|AAB64092.1| PrsE [Sinorhizobium meliloti]
 gi|15141178|emb|CAC49691.1| PrsE [Sinorhizobium meliloti 1021]
          Length = 439

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 69/434 (15%), Positives = 169/434 (38%), Gaps = 13/434 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R+    L  +++L++  + G+  W+    +  ++ + G ++ +DNV +++    GI+ +
Sbjct: 13  RRSLSRHLIGVSVLALALVAGVGGWAATTELSSAIVAGGVVIVDDNVKKVQHLTGGIVGE 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDV 126
             V+ G ++  G  L+  +       + + + ++      R  +  E+        + D+
Sbjct: 73  LLVKEGDRVEAGQVLIRLDGTTVRANLAIIESTLAQFYARRARLQAERMGAASFEIEEDL 132

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E    +   +L++          ++F    S++        +R   +      L  + +
Sbjct: 133 AEFIPGTAAAKLIE-------GEQRLFASRRSALSGMKGQLDSRKAQLADEVEGLTVQLN 185

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +   L    ++LT + +LF +  V    +   +R   +       +I  +       +E
Sbjct: 186 AIEEALKLIAEELTGVDSLFGQGLVPMQRVTTLKRQRAELEGGRGRHIAARAQARGKSSE 245

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  +      +   EIS++L   +   A+   + T       +  I +P++G I      
Sbjct: 246 IDLQILQLDEDRRSEISKELTDVEAKIAEYEERRTAATDQLRRLDITAPLSGRIYQLAIH 305

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           + +      + LM +VP ++   + AKV    I  ++ G +  +RF  +      + +A 
Sbjct: 306 TVNGVINPGETLMLVVPEAEDLTVEAKVATHDIDQIRVGQSVEIRFSAFNQRTTPEVEAE 365

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  + P +   +       YY + ++    + +    + L  G PAEV     + T+   
Sbjct: 366 VVTVAPDLVTDERT--GASYYPLRIRPKAESLAKLKGLSLYPGMPAEVFIKIADRTVISY 423

Query: 426 IIHPITDNWPKIFE 439
           +  P+TD     F 
Sbjct: 424 LTKPLTDQMRHAFR 437


>gi|152985262|ref|YP_001347108.1| metalloprotease secretion protein [Pseudomonas aeruginosa PA7]
 gi|150960420|gb|ABR82445.1| metalloprotease secretion protein [Pseudomonas aeruginosa PA7]
          Length = 443

 Score =  328 bits (842), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 65/426 (15%), Positives = 158/426 (37%), Gaps = 14/426 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +     +    L ++G +G + W+ L P++  V  SG+++   +   ++ P  G+++  +
Sbjct: 20  DEKRFSRLGWGLVLLGFVGFLLWAGLAPLDKGVGVSGKVMVAGSRKAVQHPTGGLVRHIR 79

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFLNNKYDVLE 128
           V  G ++  G  LL  +  +     D            +     E+     +    ++L 
Sbjct: 80  VHEGERVEAGQVLLEMDATQARAQADGLFAQYLAALASLARLSAERDEKARIEFPAELL- 138

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              + R   LL+   +   +  +     +  +  ++     ++  +       E + + L
Sbjct: 139 AVDDPRLPTLLEQQRQLRDSRRRALRLELDGLAETVAGSQAQLDGLQAALRSKEQQRAAL 198

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                  ++ L  ++ L  +  V +N L   ER++ +   E+  ++    +  R I EL 
Sbjct: 199 -------EEQLRGLRQLASEGYVPRNRLLDSERLLAQVNGEIAGDLGSLGSTRRQILELR 251

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    + +E+   L   Q    +  ++L           + +P+AG +V  + F+ 
Sbjct: 252 LRMAQRREKFQEEVRASLADAQVRAEELRNRLASARFDLANSEVRAPVAGLVVGQEVFTE 311

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  Q LM+I+P  +   + A++  + +  V+ G    + F  +      +    + 
Sbjct: 312 GGVIAPGQQLMEILPERQPLLVDARLPVEMVDKVRVGLPVELMFSAFNQSTTPRVAGEVT 371

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEII 427
            +       +       YY + +++ +        +E+R G P E    +   +L   + 
Sbjct: 372 LVSADRLVDERTEA--PYYRMRIRVGEEGVRRLAGLEIRPGMPVEAFVRSGERSLLNYLF 429

Query: 428 HPITDN 433
            P+TD 
Sbjct: 430 KPLTDR 435


>gi|261822157|ref|YP_003260263.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium wasabiae WPP163]
 gi|261606170|gb|ACX88656.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium wasabiae WPP163]
          Length = 442

 Score =  328 bits (842), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 66/437 (15%), Positives = 161/437 (36%), Gaps = 13/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +  +R+   +++   LL + G    + W++  P++  V  +G ++   N   ++    
Sbjct: 11  MNQTARRDEKRAVRLGWLLVLAGFGSFLLWALFAPLDKGVMVNGSVVISGNRKVVQHNQG 70

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLN 121
           GI+ K QV++G  +  G  LLT  +++       +D + + +      +  E+  L+ + 
Sbjct: 71  GIVDKIQVKDGDSVEAGQILLTLNEVDARSASEGLDGQYLQLVAREGRLLAEQQRLNDMV 130

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               +   A       +         +  +        +  S+      + +        
Sbjct: 131 MTPRLQPIAERPEVSVITALQRDLLHSRQQSLKLEAEGMRTSIAGMEASLSAQRQVMFSK 190

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L   L         +++L  +N V +N + + ER++ +   ++ +   +     
Sbjct: 191 QKQRGTLEQQLE-------GLRSLAAENYVPRNKMLENERLLAQLNGDIAQLAGDINRTR 243

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +           Y KE++ +L + Q   +D  SK    +       I +P++GT+V
Sbjct: 244 HDIEQQTLLIAQRQQEYDKEVNSELAEVQALLSDVGSKKEKADFNLANIQIRAPVSGTVV 303

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F+        Q L++IVP  +   + A +  + +  V  G    ++F  +      
Sbjct: 304 GLKVFTEGGVIAPGQTLLEIVPDDQPLRVDAHLPVELVDKVWPGLPVELQFVAFNQSTTP 363

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNT 420
           +    +E +       + +     YY + + + D    +   +E++ G P +        
Sbjct: 364 RVAGTVELLSADRLLDERD--GSPYYSLRVMVDDEGKRALEGLEIKPGMPVQGFVRTGER 421

Query: 421 TLAQEIIHPITDNWPKI 437
           +    +  P+ D     
Sbjct: 422 SFVNYLFKPLMDRLHLA 438


>gi|2952088|gb|AAC38257.1| zinc-protease transporter [Pseudomonas fluorescens]
          Length = 437

 Score =  328 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 67/432 (15%), Positives = 158/432 (36%), Gaps = 14/432 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R+     +   LL+++G  G   W+ L P++  +   G ++       +++   G++ +
Sbjct: 12  ERDARFFARMGWLLTVVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTFSPGVVSR 71

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDV 126
             V++G ++ QG PL   +  +    +   +   +          +E+     +    + 
Sbjct: 72  ILVKDGERVKQGQPLFRLDQTQHQADVQSLQAQYRMAWASVARWQSERDNQSAITFPAE- 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L  + +     +L+   +  S+  + F    + +  +++    ++  +   R DL  ++ 
Sbjct: 131 LSSSPDPALALVLEGQRQLFSSRREAFAREQAGIRANIEGATAQLNGMRRARSDLTAQAQ 190

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LR  LS        ++ L +   + +N L + +R + +   +L +N  E   + + I E
Sbjct: 191 SLRDQLS-------NLQPLADNGYIPRNRLMEYQRQLSQVQQDLAQNTGESGRVEQGILE 243

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +       Y KE+   L   Q        +LT      +   I +P  G  V     
Sbjct: 244 SRLKLQQHSEEYQKEVRSQLADAQLRSLTLEQQLTSAGFDLQHSEINAPADGIAVNLSVH 303

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +  + L++IVP      +   +    +  V       + F  +   R  +    
Sbjct: 304 TEGAVVRAGETLLEIVPQGTRLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGE 363

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  I     Q  +      YY +   +++ A    + + ++ G PAE+       +L   
Sbjct: 364 VSLISAD--QMLDEKTGAPYYVLRTTVSEAALEKLHGLVIKPGMPAEMFVRTGERSLLNY 421

Query: 426 IIHPITDNWPKI 437
           +  P+ D     
Sbjct: 422 LFKPLLDRAGSA 433


>gi|26989279|ref|NP_744704.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida KT2440]
 gi|24984127|gb|AAN68168.1|AE016448_6 metalloprotease secretion protein [Pseudomonas putida KT2440]
          Length = 446

 Score =  328 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 70/430 (16%), Positives = 148/430 (34%), Gaps = 14/430 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             ++    L I G  G + WS L P++  V ++G +    N   ++    G ++   V  
Sbjct: 24  RPVRWGVWLVIAGFGGFLLWSCLAPLDAGVVATGTVKVTSNRKAVQHLSGGTVEAIMVRE 83

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEK-A 130
           G  + +G  ++  + +                K +   ++ E+   D +     +LE  A
Sbjct: 84  GDVVKKGQEVVRLDALRAVAEQGALSAQYIVSKTVENRLEAERDGRDTVTFDPALLEHYA 143

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            + R    +D   +   T        +S +  +L     +++        L+       +
Sbjct: 144 NDPRLLAAMDLQQRLLDTRRAGLAGELSILEENLTASAVQLK-------GLQQVYGARAS 196

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            +    ++L   + L  +  V +N L + ER     +    EN++          E+   
Sbjct: 197 QIGFLNQELQGTRVLAAEGYVPRNRLLELERSNADLSAGQAENLNNIARARSQATEIKLR 256

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                 +YLKE+   L    +       +L  L+       I SPI G +      +   
Sbjct: 257 ILQRQHDYLKEVESQLTDTAKENTTLADRLRALDYEVTHTVIRSPIDGMVQGLSIATVGG 316

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q    +M++VP  +   + A +  + I  +  G    + FP +   +       ++ I
Sbjct: 317 IIQPGAKIMEVVPLDQPLQVDAMIPVQAIDKMVPGLAVDIAFPAFNHAQTPNIPGRVKTI 376

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                  +     Q +Y   +++T        +  +R G PA V        L   ++ P
Sbjct: 377 SADRLLDE--ESKQPFYLAQVEVTPAGMGLLGSNHIRPGMPATVTIKTGERNLLSYLLKP 434

Query: 430 ITDNWPKIFE 439
           + +     F+
Sbjct: 435 MLERVDAAFK 444


>gi|294142619|ref|YP_003558597.1| HlyD family secretion protein [Shewanella violacea DSS12]
 gi|293329088|dbj|BAJ03819.1| HlyD family secretion protein [Shewanella violacea DSS12]
          Length = 460

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 166/448 (37%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P S + +       I+  + W+    ++   +  G+++    +  I+
Sbjct: 12  MIDDVYGAMMTDAPTSHRLIIWSLAAMIVCFLVWAYFSELDQVTTGMGKVIPSSQIQVIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSAL 117
           S   GI+++  V+ G  + +G  L+  +D       + +   + +L+     + +E S++
Sbjct: 72  SLDGGIMQEMYVKEGMMVTKGQALMRIDDTRFRSDYEQQAQEVYSLQANVVRLSSELSSI 131

Query: 118 DFLNNKYDVLEKAFESREE-----QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
              +   +  E+   +        +L+          S  +   + S+   L++   +++
Sbjct: 132 TITSMSVNWREQVKITPRPLQFPGELIKDEPALVQRQSDEYFGRLDSLINQLEILARQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +L +K   L        ++L + K L +K  V + +L + ER+V     EL  
Sbjct: 192 QKQQESKELASKIDTLSRSYQLVSRELELTKPLADKGIVPEVELIKVERVVNDIRGELAS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +    +E   +      N+  +    L + Q   +         +   ++  I
Sbjct: 252 LRLLRPKLKASQDEAILKRREAVLNFAADARTQLNELQTKLSRMNEAQVGAQDKVDKAEI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GTI      +     Q    +++IVP      I  K+ PK I  +  G  A V+ 
Sbjct: 312 TSPVNGTIKTIHINTLGGVVQPGIDIIEIVPSEDQLLIETKILPKDIAFLHPGLPAVVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R      ++E I    +Q +       +Y V ++    + + +N   + +  G 
Sbjct: 372 TAYDFTRYGGLNGVVEHISADTTQDEE---GNSFYLVRVRTELSSLTKDNGTEMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTSVDVITGQRSVLEYILNPILRAKDTA 456


>gi|148548366|ref|YP_001268468.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida F1]
 gi|148512424|gb|ABQ79284.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida F1]
          Length = 446

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 70/430 (16%), Positives = 148/430 (34%), Gaps = 14/430 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             ++    L I G  G + WS L P++  V ++G +    N   ++    G ++   V  
Sbjct: 24  RPVRWGVWLVIAGFGGFLLWSCLAPLDAGVVATGTVKVTSNRKAVQHLSGGTVEAIMVRE 83

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEK-A 130
           G  + +G  ++  + +                K +   ++ E+   D +     +LE  A
Sbjct: 84  GDVVKKGQEVVRLDALRAVAEQGALSAQYIVSKTVENRLEAERDGRDTVTFDPALLEHYA 143

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            + R    +D   +   T        +S +  +L     +++        L+       +
Sbjct: 144 NDPRLLAAMDLQQRLLDTRRAGLAGELSILEENLTASAVQLK-------GLQQVYGARAS 196

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            +    ++L   + L  +  V +N L + ER     +    EN++          E+   
Sbjct: 197 QIGFLNQELQGTRVLAAEGYVPRNRLLELERSNADLSAGQAENLNNIARARSQATEIKLR 256

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                 +YLKE+   L    +       +L  L+       I SPI G +      +   
Sbjct: 257 ILQRQHDYLKEVESQLTDTAKENTTLADRLRALDYEVTHTVIRSPIDGMVQGLSIATVGG 316

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q    +M++VP  +   + A +  + I  +  G    + FP +   +       ++ I
Sbjct: 317 IIQPGAKIMEVVPLDQPLQVDAMIPVQAIDKMVPGLAVDIAFPAFNHAQTPNIPGRVKTI 376

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                  +     Q +Y   +++T        +  +R G PA V        L   ++ P
Sbjct: 377 SADRLLDE--ESKQPFYLAQVEVTPAGMGLLGSNHIRPGMPATVTIKTGERNLLSYLLKP 434

Query: 430 ITDNWPKIFE 439
           + +     F+
Sbjct: 435 MLERVDAAFK 444


>gi|116051424|ref|YP_789743.1| metalloprotease secretion protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|115586645|gb|ABJ12660.1| metalloprotease secretion protein [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 443

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 67/431 (15%), Positives = 160/431 (37%), Gaps = 14/431 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L+ +     +    L ++G +G + W+ L P++  V  SG ++   +   ++ P  G+
Sbjct: 15  AALELDEKRFSRLGWGLVLLGFVGFLLWAGLAPLDKGVGVSGTVMVAGSRKAVQHPTGGL 74

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFLNNK 123
           ++  +V  G ++  G  LL  +  +     D            +     E+     +   
Sbjct: 75  VRHIRVHEGERVEAGQVLLEMDATQARAQADGLFAQYLAALASLARLSAERDEKARIEFP 134

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++L    + R   LL+   + H +  +     +  +  ++     ++  +       E 
Sbjct: 135 AELL-ALDDPRLPTLLEQQRQLHDSRRRALRLELDGLAETVAGSQAQLDGLQAALRSKEQ 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +   L       ++ L  ++ L  +  V +N L   ER++ +   E+  ++    +  R 
Sbjct: 194 QRVAL-------EEQLRGLRQLASEGYVPRNRLLDSERLLAQVNGEIAGDLGSLGSTRRQ 246

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I EL          + +E+   L   Q    +  ++L           + +P+AG +V  
Sbjct: 247 ILELRLRMAQRREKFQEEVRASLADAQVRAEELRNRLASARFDLANSEVRAPVAGLVVGQ 306

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           + F+        Q LM+I+P  +   + A++  + +  V+ G    + F  +      + 
Sbjct: 307 EVFTEGGVIAPGQQLMEILPERQPLLVDARLPVEMVDKVRVGLPVELMFSAFNQSTTPRV 366

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
           +  +  +       + +     YY V +++ +        +E+R G P E    +   +L
Sbjct: 367 EGEVTLVSADRLLDERSEA--PYYRVRIRVGEEGVRRLAGLEIRPGMPVEAFVRSGERSL 424

Query: 423 AQEIIHPITDN 433
              +  P+ D 
Sbjct: 425 LNYLFKPLADR 435


>gi|50121706|ref|YP_050873.1| protease secretion protein [Pectobacterium atrosepticum SCRI1043]
 gi|49612232|emb|CAG75682.1| protease secretion protein [Pectobacterium atrosepticum SCRI1043]
          Length = 442

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 68/437 (15%), Positives = 168/437 (38%), Gaps = 13/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +  +R+   +++   LL + G  G + W++  P++  V  +G ++   N   ++    
Sbjct: 11  MNQTARRDEKRAVRLGWLLVLAGFGGFLLWALFAPLDKGVMVNGSVVISGNRKVVQHNQG 70

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLN 121
           GI+ K QV++G ++  G  LLT  +++       +D + + +      +  E+  L  + 
Sbjct: 71  GIVDKIQVKDGDKVEAGQILLTLNEVDARSASEGLDGQYLQLVAREGRLLAEQQRLSDMV 130

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               +   A           +    +    +      S+    +   + +  +  +    
Sbjct: 131 MTPRLQPLAERPE-------MSVITALQRDLLRSRQQSLKLEAEGMRSSIAGMEASLSAQ 183

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
               S  +    + ++ L  +++L  +N V +N + + ER++ +   ++ +   +     
Sbjct: 184 RQVMSSKQKQRETLEQQLQGLRSLAAENYVPRNKMLENERLLAQLNGDIAQLTGDINRTR 243

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R I +           Y KE++ +L + Q   +D  SK    +       + +P++GT+V
Sbjct: 244 RDIEQQTLLMAQRQQEYDKEVNSELAEVQALLSDVGSKKEKADFNLANIQMRAPVSGTVV 303

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F+        Q L++IVP  +   +   +  + +  V  G    ++F  +      
Sbjct: 304 GLKVFTEGGVIAPGQTLLEIVPDDQPLRVDGHLPVELVDKVWPGLPVELQFVAFNQSTTP 363

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNT 420
           +    +E +       D +   Q YY + +++ D    +   +E++ G P +        
Sbjct: 364 RVAGTVELLSADRLLDDRD--GQPYYSLRVQVDDEGKRALEGLEIKPGMPVQGFIRTGER 421

Query: 421 TLAQEIIHPITDNWPKI 437
           +    +  P+ D     
Sbjct: 422 SFVNYLFKPLMDRLHLA 438


>gi|330809666|ref|YP_004354128.1| Alkaline protease secretion protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327377774|gb|AEA69124.1| Alkaline protease secretion protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 444

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 74/440 (16%), Positives = 160/440 (36%), Gaps = 14/440 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H    ++ +R+     +    L+++G     TW+ L P++  +   G ++       ++S
Sbjct: 11  HSQDVEHPERDARFFTRMGWALALVGAGSFFTWASLAPLDQGIPVQGTVVVSGKRKAVQS 70

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALD 118
             SG++ +  V  G  + QG PL   +  +    +   +   +          +E+  L 
Sbjct: 71  MSSGVVSRILVREGEVVKQGQPLFRLDQTQAAADVQSLQAQYRMTWASLARWQSERDNLL 130

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            ++   + L +  + R   +L+   +  S+  + F    +++  +++    ++  +   R
Sbjct: 131 QVSFPAE-LSRDPDPRLALVLEGQRQLFSSRREAFAREQAALRANIEGAAAQLAGMRRAR 189

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            DL  ++  LR  L         ++ L +   + +N L   +R + +   EL +N  E  
Sbjct: 190 SDLTAQAESLRLQLG-------NLQPLADNGYIPRNRLLDYQRQLSQVQQELAQNSGESG 242

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            + + I E   +       Y KE+   L   Q        +L       +   IL+   G
Sbjct: 243 RVEQGIVESRLKLQQHHEEYQKEVRSQLADAQLKSETLQQQLKSAGFELQHSEILATADG 302

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
             V     +     +Q   L++IVP      +   +    I  V       + F  +   
Sbjct: 303 IAVNLGVHTEGAVVRQGDTLLEIVPQGTRLEVEGHLPVHLIDKVGPHLPVDILFTAFNQN 362

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
           R  +    +  I     Q  +      YY +   ++D+A    N + ++ G PAE+    
Sbjct: 363 RTPRVPGEVSLISAD--QMLDEKTGAPYYVLRSSVSDVAMDKLNGLVIKPGMPAEMFVRT 420

Query: 418 KNTTLAQEIIHPITDNWPKI 437
              +L   +  P+ D     
Sbjct: 421 GERSLLNYLFKPLLDRAGSA 440


>gi|296388079|ref|ZP_06877554.1| metalloprotease secretion protein [Pseudomonas aeruginosa PAb1]
          Length = 443

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 68/431 (15%), Positives = 162/431 (37%), Gaps = 14/431 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L+ +     +    L ++G +G + W+ L P++  V  SG ++   +   ++ P  G+
Sbjct: 15  AALELDEKRFSRLGWGLVLLGFVGFLLWAGLAPLDKGVGVSGTVMVAGSRKAVQHPTGGL 74

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFLNNK 123
           ++  +V  G ++  G  LL  +  +     D            +     E+     +   
Sbjct: 75  VRHIRVHEGERVEAGQVLLEMDATQARAQADGLFAQYLAALASLARLSAERDEKARIEFP 134

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++L    + R   LL+   + H +  +     +  +  ++     ++  +       E 
Sbjct: 135 AELL-ALDDPRLPTLLEQQRQLHDSRRRALRLELDGLAETVAGSQAQLDGLQAALRSKEQ 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + + L       Q+ L  ++ L  +  V +N L   ER++ +   E+  ++    +  R 
Sbjct: 194 QRAAL-------QEQLRGLRQLASEGYVPRNRLLDSERLLAQVNGEIAGDLGSLGSTRRQ 246

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I EL          + +E+   L   Q    +  ++L           + +P+AG +V  
Sbjct: 247 ILELRLRMAQRREKFQEEVRASLADAQVRAEELRNRLASARFDLANSEVRAPVAGLVVGQ 306

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           + F+        Q LM+I+P  +   + A++  + +  V+ G    + F  ++     + 
Sbjct: 307 EVFTEGGVIAPGQQLMEILPERQPLLVDARLPVEMVDKVRVGLPVELMFSAFSQSTTPRV 366

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
           +  +  +       + +     YY V +++ +        +E+R G P E    +   +L
Sbjct: 367 EGEVTLVSADRLLDERSEA--PYYRVRIRVGEEGVRRLAGLEIRPGMPVEAFVRSGERSL 424

Query: 423 AQEIIHPITDN 433
              +  P+ D 
Sbjct: 425 LNYLFKPLADR 435


>gi|330967430|gb|EGH67690.1| HlyD family secretion protein [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 440

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 74/424 (17%), Positives = 164/424 (38%), Gaps = 10/424 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++  +     +    + ++      TW+ L P+  +V  +G ++ +     ++    GI
Sbjct: 14  DDMPTSDRGIRRIGVAIVLVTFGLFGTWAALAPLGNAVYGTGVVMVQSYRKTVQHLEGGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K+    +G  + +  PL+  +D +     +  +  + + +      ++  D L     +
Sbjct: 74  VKELLARDGDTVHKDDPLIVLDDSQLRSQFESTRNQLISTQAREARLRAERDELPAIPPL 133

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                +S+         +      +VF    +S    + ++  R+  +    + L +   
Sbjct: 134 TISGTDSQRA------KEAIEGEEQVFRTRKNSRLTEISVQRERIGQLKQQIIGLRDMIR 187

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              +L  S+  ++T +K+L  +  V +  L +QER +     E+ ++          I+E
Sbjct: 188 TKVSLEKSYSSEITELKDLLSQGFVDKQRLLEQERKLDMLKSEVSDHESTITKTQLQISE 247

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +      N+  E++++L   Q    D     + LE    +  I +P  G ++  +  
Sbjct: 248 TELQIIQLNKNFSSEVAKELSDVQAKVFDLQETASALEDRLSRIVIRAPEDGMVLDMKVH 307

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +         PL+ IVP S    + A V    I  +  G    V F  +        + I
Sbjct: 308 TIGGVVGPGTPLLDIVPESSELVVEAHVAINDIDRISIGKLTDVHFSAFNSATTPVIEGI 367

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           + +I     + +     + YY V +K+T+       + +L+ G PAEVL  A   T+ Q 
Sbjct: 368 VTRISADRLKDE---AGEPYYLVRVKLTEKGLKRLGDRKLQPGMPAEVLINAGERTMLQY 424

Query: 426 IIHP 429
           ++ P
Sbjct: 425 LLKP 428


>gi|225630268|ref|YP_002727059.1| secretion protein, HlyD family [Wolbachia sp. wRi]
 gi|225592249|gb|ACN95268.1| secretion protein, HlyD family [Wolbachia sp. wRi]
          Length = 530

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 87/445 (19%), Positives = 167/445 (37%), Gaps = 33/445 (7%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + +L   GI G+  WS + PI+ +V +SGE++   N   ++    GII K  V+
Sbjct: 96  PLFFGLVVILIFFGIGGI--WSAIAPIDGAVHASGEVIVSSNRKIVQHLGGGIISKILVK 153

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
               + +  PL+   D+     + + K  + +        ++ L  +    D LE + E 
Sbjct: 154 ESQAVKKDEPLVLLSDVNEKANLSIIKEKLLSFLA----TEARLLAIRVDLDTLEFSDEV 209

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           ++    + + K      K+FN    S+     +   R++ +      L  + +       
Sbjct: 210 KKLSNDELVNKVIKNQVKLFNSQRKSILGKTDILQQRIKQLNDELAGLNFQLNAAHKQYD 269

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++L   + L +   +S+  +   E+       E+   +   ++ +  + +   E  L
Sbjct: 270 LITEELETKRQLLDSGHISKPHILALEKQF----AEIEGRVGHYRSAISQVQQKIGENEL 325

Query: 254 EFANYLKE----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E  N   +     + +L++   + AD   +L + E +  +  I SP  G +   +  +  
Sbjct: 326 EIINVKNDSQERANAELKEVSTSIADLKERLMVAEDSLARTIIKSPQDGIVTDIRYHTEG 385

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPH 354
              Q   P+M +VP      I AK+  + I+ V                +G    VR   
Sbjct: 386 GVIQSGVPIMSVVPSDDDLIIDAKIQTRNIEEVLSAQKKDSNIVSIDGLEGLKVKVRLSA 445

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEV 413
           Y+  R      I+  I P         +   YY V + I     +   N+ L  G PAEV
Sbjct: 446 YSARRLSLISGIVSHISPDALDD---PRLGRYYSVRVVIPKSELAQFKNVYLYPGMPAEV 502

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIF 438
               ++ TL   +  PI     + F
Sbjct: 503 YIVTQSRTLLSFLFTPIIATVDRSF 527


>gi|264679154|ref|YP_003279061.1| type I secretion membrane fusion protein, HlyD [Comamonas
           testosteroni CNB-2]
 gi|262209667|gb|ACY33765.1| type I secretion membrane fusion protein, HlyD [Comamonas
           testosteroni CNB-2]
          Length = 470

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 77/417 (18%), Positives = 160/417 (38%), Gaps = 13/417 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              + +  +S++ ++ L+ W+ L  I+  V   G+++    V  ++S   GI+K+  V  
Sbjct: 57  RGSRLLIWVSLVTVVVLLLWACLGRIDEVVRGQGKVVPSRQVQVVQSLDGGIVKEILVHP 116

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + QG  +L  +    +  +   K  +  L+      ++       K     +A    
Sbjct: 117 GEHVEQGQVILRIDPTRYSSSLGENKAELLALKAKAARLQALASGEPFKAPEDVQALAP- 175

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             QL++   +   + S+  N  ++     L+ +   +R    NR    +  SL       
Sbjct: 176 --QLVEMERRMWESRSQELNTNVNIARDQLRQRQQELRETQANRDQASSSCSL------- 226

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++L++ + L +  AVS+ DL + +R V +   E +    +   +   I E   +    
Sbjct: 227 TSEELSVTRPLLKSGAVSEVDLLRLQRDVARFCGEAKAAGAQIGRIQAAIQEAERKIQES 286

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N   +   +L + Q            LE   +   + SP+ GT+    + +     Q 
Sbjct: 287 ELNMRNQSRSELSETQAKLGTLEQGKVALEDRVKLAEVRSPVRGTVNTLMANTVGGVVQP 346

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + ++ IVP      +  ++ P+ I  +  G  A V+F  Y        +  +E+I    
Sbjct: 347 GKDILDIVPLDDTLLMEVQINPRDIGFLHFGQQAEVKFTAYDFAIYGGLQGKLEQIGANT 406

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
              +   +   +Y V ++       D++  +  G  AEV       TL Q ++ PI 
Sbjct: 407 VTDE---KGNSFYVVKVRTEKAHVGDDSRPIIPGMQAEVHILTGKRTLMQYLLKPIL 460


>gi|313108759|ref|ZP_07794751.1| metalloprotease secretion protein [Pseudomonas aeruginosa 39016]
 gi|310881253|gb|EFQ39847.1| metalloprotease secretion protein [Pseudomonas aeruginosa 39016]
          Length = 443

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 66/431 (15%), Positives = 159/431 (36%), Gaps = 14/431 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L+ +     +    L ++G +G + W+ L P++  V  SG ++   +   ++ P  G+
Sbjct: 15  AALELDEKRFSRLGWGLVLLGFVGFLLWAGLAPLDKGVGVSGTVMVAGSRKAVQHPTGGL 74

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFLNNK 123
           ++  +V  G ++  G  LL  +  +     D            +     E+     +   
Sbjct: 75  VRHIRVHEGERVEAGQVLLEMDATQARAQADGLFAQYLAALASLARLSAERDEKARIEFP 134

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++L    + R   LL+   + H +  +     +  +  ++     ++  +       E 
Sbjct: 135 AELL-ALDDPRLPTLLEQQRQLHDSRRRALRLELDGLAETVAGSQAQLDGLQAALRSKEQ 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + + L       ++ L  ++ L  +  V +N L   ER++ +   E+  ++    +  R 
Sbjct: 194 QRAAL-------EEQLRGLRQLASEGYVPRNRLLDSERLLAQVNGEIAGDLGSLGSTRRQ 246

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I EL          + +E+   L   Q    +  ++L           + +P+AG ++  
Sbjct: 247 ILELRLRMAQRREKFQEEVRASLADAQVRAEELRNRLASARFDLANSEVRAPVAGLVLGQ 306

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           + F+        Q LM+I+P  +   + A++    +  V+ G    + F  +      + 
Sbjct: 307 EVFTEGGVIAPGQQLMEILPERQPLLVDARLPVGMVDKVRVGLPVELMFSAFNQSTTPRV 366

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
           +  +  +       +       YY V +++ +        +E+R G P E    +   +L
Sbjct: 367 EGQVTLVSADRLLDERGEA--PYYRVRIRVGEEGVRRLAGLEIRPGMPVEAFVRSGERSL 424

Query: 423 AQEIIHPITDN 433
              +  P+ D 
Sbjct: 425 LNYLFKPLADR 435


>gi|237808023|ref|YP_002892463.1| type I secretion membrane fusion protein, HlyD family [Tolumonas
           auensis DSM 9187]
 gi|237500284|gb|ACQ92877.1| type I secretion membrane fusion protein, HlyD family [Tolumonas
           auensis DSM 9187]
          Length = 461

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 69/446 (15%), Positives = 156/446 (34%), Gaps = 14/446 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 +    P   K +     +  I    W+    ++      G+++    +  I++ 
Sbjct: 15  DDASAAVLLTTPIRAKLLLWSCFLFFIVAFIWAAWAELDEVTRGDGKVIPSKQLQVIQNL 74

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDF 119
             GI+K+     G  + +G  LL  +D         K+  + +++     +  E +++  
Sbjct: 75  EGGIVKEIFAREGQMVEEGQELLRIDDTRFRSDFGEKQQELISVQGDVARLRAEIASISV 134

Query: 120 LNNKYDVLEKAFESREEQLL------DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            N+      +     E+ ++          +  +         I+++   L +   ++  
Sbjct: 135 SNDTSLPWREQAVINEQPIIFPEGYEAISPENVARQKNALQANINNLNNQLVIMGQQIEQ 194

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                L++ +K   L   +    +++ + + L ++  VSQ DL + +R +     EL   
Sbjct: 195 KENEILEINSKIRTLGRSVGLAGREVAINRPLVKEGIVSQIDLLKMQRQLNDMQGELENA 254

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                     + E   +       +  +  +++E+ Q   +        L+    + ++ 
Sbjct: 255 RLLLPKQNSLLRESILKRKDVALQFRVDAQKEMEEKQSRLSQLNEGQIGLKDRVSRTSVT 314

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ GTI   +  +     Q    +++IVP      I AKV PK I  ++ G  A V+F 
Sbjct: 315 SPVKGTIKTLKVNTVGGVVQPGMDIVEIVPTEDTLLIEAKVLPKDIAFLRPGLKAMVKFT 374

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPA 411
            Y           +E I     Q D   +   +Y V ++     L      + +  G  A
Sbjct: 375 AYDFTIYGGLDGKLEHISADSIQDD---KGNSFYLVRVRTDRSFLGSDAEPLPIIPGMMA 431

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKI 437
            V       ++ + ++ PI       
Sbjct: 432 TVDIVTGKKSVLEYLMKPILRAKQSA 457


>gi|307309390|ref|ZP_07589049.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
 gi|306900120|gb|EFN30739.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
          Length = 439

 Score =  328 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 69/434 (15%), Positives = 169/434 (38%), Gaps = 13/434 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R+    L  +++L++  + G+  W+    +  ++ + G ++ +DNV +++    GI+ +
Sbjct: 13  RRSLSRHLIGVSVLALALVAGVGGWAATTELSSAIVAGGVVIVDDNVKKVQHLTGGIVGE 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDV 126
             V+ G ++  G  L+  +       + + + ++      R  +  E+        + D+
Sbjct: 73  LLVKEGDRVEAGQVLIRLDGTTVRANLAIIESTLAQFYARRARLQAERIGAASFEIEEDL 132

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E    +   +L++          ++F    S++        +R   +      L  + +
Sbjct: 133 AEFIPGTAAAKLIE-------GEQRLFASRRSALSGMKGQLDSRKAQLADEVEGLTVQLN 185

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +   L    ++LT + +LF +  V    +   +R   +       +I  +       +E
Sbjct: 186 AIEEALKLIAEELTGVDSLFGQGLVPMQRVTTLKRQRAELEGGRGRHIAARAQARGKSSE 245

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  +      +   EIS++L   +   A+   + T       +  I +P++G I      
Sbjct: 246 IDLQILQLDEDRRSEISKELTDVEAKIAEYEERRTAATDQLRRLDITAPLSGRIYQLAIH 305

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           + +      + LM +VP ++   + AKV    I  ++ G +  +RF  +      + +A 
Sbjct: 306 TVNGVINPGETLMLVVPEAEDLTVEAKVATHDIDQIRVGQSVEIRFSAFNQRTTPEVEAE 365

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  + P +   +       YY + ++    + +    + L  G PAEV     + T+   
Sbjct: 366 VVTVAPDLVTDERT--GASYYPLRIRPKAESLAKLKGLSLYPGMPAEVFIKIADRTVISY 423

Query: 426 IIHPITDNWPKIFE 439
           +  P+TD     F 
Sbjct: 424 LTKPLTDQMRHAFR 437


>gi|325276912|ref|ZP_08142601.1| HlyD family secretion protein [Pseudomonas sp. TJI-51]
 gi|324097959|gb|EGB96116.1| HlyD family secretion protein [Pseudomonas sp. TJI-51]
          Length = 441

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 77/431 (17%), Positives = 167/431 (38%), Gaps = 9/431 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + ++  +     +    +  +      TW+   P+  SV  +G +  ++    ++    G
Sbjct: 13  FDDMPTSDRGIRRIGLTIVFVTFGIFGTWAAFAPLSNSVHGTGVVTVQNYRKTVQHLEGG 72

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I+K+    +G  + +G PL+  ++ + +   +  +  +   R      ++  D L +   
Sbjct: 73  IVKELHARDGDLVNKGDPLIVLDESQLSAEYESTRNQLIVARYKEARLRAERDGLASIPA 132

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V  +  +S   Q      +  +   +VF     S+   + +   R++ +      L +  
Sbjct: 133 VTMEGTDSDRAQ------EALAGEQQVFKARHDSLQGEISVNRERIQQMQQQIAGLNDMI 186

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                L  S+  ++  +K L  +  V    L +QER +     E+ ++          I 
Sbjct: 187 RTKTGLEKSYSGEIKQLKELLAEGFVDNQRLLEQERKLDMLKTEVADHQSSITKTKLQIG 246

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   +       +  +++++L   Q    D   K   L     +  I +P +G ++  + 
Sbjct: 247 ETELQIVQLKKKFDADVAKELSDVQAQVFDLQEKEAALRDRLSRVVIRAPESGMVLDMKV 306

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +       + PL+ IVP      + AKV P+ I  ++ G TA VRF  +        + 
Sbjct: 307 HTIGGVVSAATPLLDIVPAQSELVVEAKVAPRDIDRLELGKTADVRFSAFNQATTPIIEG 366

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            + +I       +      +YY V +K+T+         +L+ G PAEVL  A + T+ Q
Sbjct: 367 KLTRISADSLVDER--SGDQYYLVRVKVTEDGMKKLAGRKLQPGMPAEVLINAGDRTMLQ 424

Query: 425 EIIHPITDNWP 435
            ++ P  + + 
Sbjct: 425 YLLKPARNMFA 435


>gi|9438190|gb|AAF87591.1|AF286062_4 AprE [Pseudomonas brassicacearum]
          Length = 438

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 74/440 (16%), Positives = 160/440 (36%), Gaps = 14/440 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H    ++ +R+     +    L+++G     TW+ L P++  +   G ++       ++S
Sbjct: 5   HSQDVEHPERDARFFTRMGWALALVGAGSFFTWASLAPLDQGIPVQGTVVVSGKRKAVQS 64

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALD 118
             SG++ +  V  G  + QG PL   +  +    +   +   +          +E+  L 
Sbjct: 65  MSSGVVSRILVREGEVVKQGQPLFRLDQTQAAADVQSLQAQYRMTWASLARWQSERDNLL 124

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            ++   + L +  + R   +L+   +  S+  + F    +++  +++    ++  +   R
Sbjct: 125 QVSFPAE-LSRDPDPRLALVLEGQRQLFSSRREAFAREQAALRANIEGAAAQLAGMRRAR 183

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            DL  ++  LR  L         ++ L +   + +N L   +R + +   EL +N  E  
Sbjct: 184 SDLTAQAESLRLQLG-------NLQPLADNGYIPRNRLLDYQRQLSQVQQELAQNSGESG 236

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            + + I E   +       Y KE+   L   Q        +L       +   IL+   G
Sbjct: 237 RVEQGIVESRLKLQQHHEEYQKEVRSQLADAQLKSETLQQQLKSAGFELQHSEILATADG 296

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
             V     +     +Q   L++IVP      +   +    I  V       + F  +   
Sbjct: 297 IAVNLGVHTEGAVVRQGDTLLEIVPQGTRLEVEGHLPVHLIDKVGPHLPVDILFTAFNQN 356

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
           R  +    +  I     Q  +      YY +   ++D+A    N + ++ G PAE+    
Sbjct: 357 RTPRVPGEVSLISAD--QMLDEKTGAPYYVLRSSVSDVAMDKLNGLVIKPGMPAEMFVRT 414

Query: 418 KNTTLAQEIIHPITDNWPKI 437
              +L   +  P+ D     
Sbjct: 415 GERSLLNYLFKPLLDRAGSA 434


>gi|299533567|ref|ZP_07046943.1| type I secretion membrane fusion protein, HlyD [Comamonas
           testosteroni S44]
 gi|298718473|gb|EFI59454.1| type I secretion membrane fusion protein, HlyD [Comamonas
           testosteroni S44]
          Length = 470

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 76/417 (18%), Positives = 160/417 (38%), Gaps = 13/417 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              + +  +S++ ++ L+ W+ L  I+  V   G+++    V  ++S   GI+K+  V  
Sbjct: 57  RGSRLLIWVSLVTVVVLLLWACLGRIDEVVRGQGKVVPSRQVQVVQSLDGGIVKEILVHP 116

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + QG  +L  +    +  +   K  +  L+      ++       K     +A    
Sbjct: 117 GEHVEQGQVILRIDPTRYSSSLGENKAELLALKAKAARLQALASGEPFKAPEDVQALAP- 175

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             QL++   +   + S+  N  ++     L+ +   +R    NR    +  SL       
Sbjct: 176 --QLVEMERRMWESRSQELNTNVNIARDQLRQRQQELRETQANRDQASSSCSL------- 226

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++L++ + L +  AVS+ DL + +R V +   E +    +   +   I E   +    
Sbjct: 227 TSEELSVTRPLLKSGAVSEVDLLRLQRDVARFCGEAKAAGAQIGRIQAAIQEAERKIQES 286

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N   +   +L + Q            LE   +   + +P+ GT+    + +     Q 
Sbjct: 287 ELNMRNQSRSELSETQAKLGTLEQGKVALEDRVKLAEVRAPVRGTVNTLMANTVGGVVQP 346

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + ++ IVP      +  ++ P+ I  +  G  A V+F  Y        +  +E+I    
Sbjct: 347 GKDILDIVPLDDTLLMEVQINPRDIGFLHFGQQAEVKFTAYDFAIYGGLQGKLEQIGANT 406

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
              +   +   +Y V ++       D++  +  G  AEV       TL Q ++ PI 
Sbjct: 407 VTDE---KGNSFYVVKVRTEKAHVGDDSRPIIPGMQAEVHILTGKRTLMQYLLKPIL 460


>gi|50122191|ref|YP_051358.1| HlyD family secretion protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612717|emb|CAG76167.1| HlyD family secretion protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 453

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 71/433 (16%), Positives = 156/433 (36%), Gaps = 15/433 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + +  + P S++          +  I W+ L  I+      G+ +    + +I++   GI
Sbjct: 30  RAMAEDSPRSIRFTLWAIGAFFLFFILWAGLANIDEVTRGDGKAIPSSRLQKIQNLEGGI 89

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  +  G  +  G PLL  +D      +   +     L   I+   +    ++ +  V
Sbjct: 90  VTEVFIREGQVVNAGDPLLRLDDTRFASNVGETEADRLALLSRIERLTAE---ISGQELV 146

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L +   ++  ++     + +++  +  +  IS +   L  +   +R       D   K  
Sbjct: 147 LSEEITTQAPKVAAGEKELYNSRRQQLHNEISGLEEQLIQRRQELR-------DFSAKEI 199

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             R  L   Q+++ M + L  + A+S+ ++ +  R   ++  +L               E
Sbjct: 200 QFRNSLGLLQQEIKMSEPLIAEGAISKVEVLRLRRAEVETRGQLDSIKLSIPRAESATKE 259

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++     + Y  E    L + Q       +    LE    +  ++SP+ G +      
Sbjct: 260 SENKIEETRSRYRSEALSQLSEAQTNLNKIEATGKALEDRVNRTLVVSPVRGIVQQVLVN 319

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    L++IVP      + AK+ P+ I  +  G  A ++   Y        K  
Sbjct: 320 TIGGVIQPGSDLVEIVPLDDKLLVEAKIRPQDIAFLHPGQDAIIKLTAYDYTIYGGLKGQ 379

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I P         +   +Y + L+     L  +D  + +  G  A V       T+  
Sbjct: 380 LEQISPDTVTD---KEGNSFYIIRLRTDKNYLGSADKPLLIIPGMVASVDIITGKKTILS 436

Query: 425 EIIHPITDNWPKI 437
            ++ PI     + 
Sbjct: 437 YLLKPIIRAKAEA 449


>gi|320325890|gb|EFW81950.1| HlyD family secretion protein [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320330298|gb|EFW86282.1| HlyD family secretion protein [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330882642|gb|EGH16791.1| HlyD family secretion protein [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 440

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 76/432 (17%), Positives = 170/432 (39%), Gaps = 10/432 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++  +     +    + ++      TW+ L P+  +V  SG ++ +     ++    GI
Sbjct: 14  DDMPTSDRGIRRVGVAIVLVTFGLFGTWAALAPLGNAVYGSGVVMVQSYRKTVQHLEGGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K+    +G  + +  PL+  +D +     +  +  + + +      ++  D L++   +
Sbjct: 74  VKELLARDGDTVHKDDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELSSIPPL 133

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                +S+         +      +VF    +S    + ++  R+  +    + L +   
Sbjct: 134 TISGTDSQRA------REAIEGEEQVFRTRKNSRQTEISVQRERIGQLKQQIIGLRDMIR 187

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              +L  S+  ++T +K+L  +  V +  L +QER +     E+ ++          I+E
Sbjct: 188 TKVSLEKSYSSEITELKDLLSQGFVDKQRLLEQERKLDMLKSEVADHESTITKTQLQISE 247

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +      N+  E++++L   Q    D     T L+    +  I +P  G ++  +  
Sbjct: 248 TELQIIQLNKNFSSEVAKELSDVQAKVFDLQETATALQDRLSRVVIRAPEDGMVLDMKVH 307

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +         PL+ IVP S    + A V    I  +  G    V F  +        + +
Sbjct: 308 TVGGVVSAGTPLLDIVPESSELVVEAHVAINDIDRISIGKLTDVHFSAFNSATTPVIEGV 367

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           + +I     + D     + YY V +K+T+       + +L+ G PAEVL  A   T+ Q 
Sbjct: 368 VTRISADRLKDD---AGEPYYLVRVKLTEKGLKRLGDRKLQPGMPAEVLINAGERTMLQY 424

Query: 426 IIHPITDNWPKI 437
           ++ P ++ + K 
Sbjct: 425 LMKPASNVFIKS 436


>gi|253687945|ref|YP_003017135.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754523|gb|ACT12599.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 442

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 65/437 (14%), Positives = 167/437 (38%), Gaps = 13/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +  +R+   +++   LL + G  G + W++  P++  V  +G ++   N   ++    
Sbjct: 11  MNQTAQRDEKRAVRLGWLLVLAGFGGFLLWALFAPLDKGVMVNGSVVISGNRKVVQHNQG 70

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLN 121
           GI+ K QV++G ++  G  LLT  +++       +D + + +      +  E+  L  + 
Sbjct: 71  GIVDKIQVKDGDRVEAGQILLTLNEVDARSASEGLDGQYLQLVAREGRLLAEQQRLSDMV 130

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               +   A +     +         +  +        +  S+      + +        
Sbjct: 131 MTPRLQPLAEKPEMSVITALQRDLLRSRQQSLKLEAEGMRSSIAGMEASLNAQRQVMSSK 190

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L       ++ L  +++L  +N V +N + + ER++ +   ++ +   +     
Sbjct: 191 QKQRETL-------EQQLQGLRSLAAENYVPRNKMLENERLLAQLNGDIAQLAGDINRTR 243

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R I +           Y KE++ +L + +   +D  SK    +       + +P++GT+V
Sbjct: 244 RDIEQQTLLIAQRQQEYDKEVNSELAEVRALLSDVGSKKEKADFNLANIQMRAPVSGTVV 303

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F+        Q L++IVP  +   + A++  + +  +  G    ++F  +      
Sbjct: 304 GLKVFTEGGVIAPGQTLLEIVPDDQPLLVDARLPVELVDKIWPGLPVELQFVAFNQSTTP 363

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNT 420
           +    +E +       + +     YY + + + D    +   +E++ G P +        
Sbjct: 364 RVAGTVELLSADRLLDERD--GSPYYSLRVMVDDEGKRALEGLEIKPGMPVQGFVRTGER 421

Query: 421 TLAQEIIHPITDNWPKI 437
           +    +  P+ D     
Sbjct: 422 SFVNYLFKPLMDRLHLA 438


>gi|320327894|gb|EFW83899.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 445

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 69/439 (15%), Positives = 151/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +   +   +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQSVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           ++   +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VHFPAELIAAG---QGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S +K L+ ++ L +   +  N L + +  + +    L +N  E   
Sbjct: 185 GMRRARSDLLAQADSLRKQLSNLEPLAQNGFIPGNRLLEFQSQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     +     IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLLHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      ++ ++  + I  V       + F  +   R
Sbjct: 305 AVNLGVHTEGAVVRAGETLLEIVPQGTRLEVKGRLPVQLIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D      N + ++ G PAE+     
Sbjct: 365 TPRVSGEVNLISADQMQDEKT--GQPYYVLRTSVGDAVLEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|307321367|ref|ZP_07600766.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|306893012|gb|EFN23799.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
          Length = 439

 Score =  327 bits (838), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 70/434 (16%), Positives = 170/434 (39%), Gaps = 13/434 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R+    L  +++L++  + G+  W+    +  ++ + G ++ +DNV +++    GI+ +
Sbjct: 13  RRSLSRHLIGVSVLALALVAGVGGWAATTELSSAIVAGGVVIVDDNVKKVQHLTGGIVGE 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDV 126
             V+ G ++  G  L+  +       + + + ++      R  +  E+        + D+
Sbjct: 73  LLVKEGDRVEAGQVLIRLDGTTVRANLAIIESTLAQFYARRARLQAERIGAASFEIEEDL 132

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E    +   +L++          ++F    S++        +R   +      L  + +
Sbjct: 133 AEFIPGTAAAKLIE-------GEKRLFASRRSALSGMKGQLDSRKAQLADEVEGLTVQLN 185

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +   L    ++LT + +LF +  V    +   +R   +       +I  +       +E
Sbjct: 186 AIEEALKLIAEELTGVDSLFGQGLVPMQRVTTLKRQRAELEGGRGRHIAARAQARGKSSE 245

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  +      +   EIS++L   +   A+   + T       +  I +P++G I    + 
Sbjct: 246 IDLQILQLDEDRRSEISKELTDVEAKIAEYEERRTAATDQLRRLDITAPLSGRIYQLATH 305

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           + +      + LM +VP ++   + AKV    I  ++ G T  +RF  +      + +A 
Sbjct: 306 TVNGVINPGETLMLVVPEAEDLTVEAKVATHDIDQIRVGQTVEIRFSAFNQRTTPEVEAE 365

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  + P +   +       YY + ++    + +    + L  G PAEV     + T+   
Sbjct: 366 VVTVAPDLVTDERT--GASYYPLRIRPKAESLAKLKGLSLYPGMPAEVFIKIADRTVISY 423

Query: 426 IIHPITDNWPKIFE 439
           +  P+TD     F 
Sbjct: 424 LTKPLTDQMRHAFR 437


>gi|320323753|gb|EFW79837.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. glycinea str. B076]
          Length = 445

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 69/439 (15%), Positives = 152/439 (34%), Gaps = 9/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +   +   +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQSVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           ++   +++      + +     L        ++F+    ++ R        +    L   
Sbjct: 128 VHFPAELIAAG---QGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLA 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    S L A   S +K L+ ++ L +   +  N L + +  + +    L +N  E   
Sbjct: 185 GMRRARSDLLAQADSLRKQLSNLEPLAQNGFIPGNRLLEFQSQLSQVQQSLAQNAGETGR 244

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E       +   Y KE+       Q        +L     + +   IL+P  G 
Sbjct: 245 IEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGI 304

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +  + L++IVP      ++ ++  + I  V       + F  +   R
Sbjct: 305 AVNLGVHTEGAVVRAGETLLEIVPQGTRLEVKGRLPVQFIDKVASHLPVDILFTAFNQSR 364

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q +     Q YY +   + D      N + ++ G PAE+     
Sbjct: 365 TPRVSGEVNLISADQMQDEKT--GQPYYVLRTSVGDAVLEKLNGLVIKPGMPAEMFVRTG 422

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 423 ERSLLNYLFKPLLDRAGSA 441


>gi|261820527|ref|YP_003258633.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium wasabiae WPP163]
 gi|261604540|gb|ACX87026.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium wasabiae WPP163]
          Length = 453

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 69/433 (15%), Positives = 148/433 (34%), Gaps = 15/433 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + +  + P S++          +  I W+ L  I+      G+ +    + +I++   GI
Sbjct: 30  RAMMEDSPRSIRFTLWAIGAFFLFFILWAGLANIDEVTRGDGKAIPSSRLQKIQNLEGGI 89

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  +  G  +  G PLL  +D      +   +     L   I+   + +         
Sbjct: 90  ITEVFIREGQIVNAGDPLLRLDDTRFASNVGETEADRLALLSRIERLNAEI--------- 140

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                    E++     K  +   +++N     +Y  +     ++        D   K  
Sbjct: 141 -SGQTLVLSEEITTQAPKVAAGEKELYNSRRQQLYNEVSGLEEQLIQRRQELRDFSAKEI 199

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             R  L   Q+++ M + L  + A+S+ ++ +  R   ++  +L             + E
Sbjct: 200 QFRNSLGLLQQEIKMSEPLIAEGAISKVEVLRLRRAEVETRGQLDSIKLSIPRAESAVKE 259

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++     + Y  E    L + Q       +    LE    +  ++SP+ G +      
Sbjct: 260 SENKIEETRSRYKSEALSQLSEAQTNLNKIEATGKALEDRVNRTLVVSPVRGIVQQVLVN 319

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    L++IVP      + AK+ P+ I  +  G  A ++   Y           
Sbjct: 320 TIGGVIQPGSDLVEIVPLDDKLLVEAKIRPQDIAFLHPGQGAIIKLTAYDYTIYGGLTGQ 379

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I P         +   +Y + L+     L  +D  + +  G  A V       T+  
Sbjct: 380 LEQISPDTVTD---KEGNSFYIIRLRTDKNYLGSADKPLLIIPGMVASVDIITGKKTILS 436

Query: 425 EIIHPITDNWPKI 437
            ++ PI     + 
Sbjct: 437 YLLKPIIRAKAEA 449


>gi|157369840|ref|YP_001477829.1| HlyD family type I secretion membrane fusion protein [Serratia
           proteamaculans 568]
 gi|157321604|gb|ABV40701.1| type I secretion membrane fusion protein, HlyD family [Serratia
           proteamaculans 568]
          Length = 443

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 73/431 (16%), Positives = 164/431 (38%), Gaps = 13/431 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + + ++     +   L+  IG+ G   W+   P++  V+S G +    N   +++P SGI
Sbjct: 14  EQIPQDERRFTRMGWLVVGIGLFGFFAWAAFAPLDKGVASPGSVTVSGNRKTVQAPASGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNK 123
           IK   V+ G ++  G  L+    ++    +D  +            +  E+  L  +   
Sbjct: 74  IKSITVKEGDKVKAGEVLVQLSQVQAQAQVDSLRDQYYTTLASEGRLLAERDGLSKVTFS 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                   + R  +++    +  S+        +    +S+     +++ +  +R++ + 
Sbjct: 134 PVFETIQAQPRVAEIIALQTQLFSSRRIGLQSEVDGYKQSMDGMRFQLKGLQDSRVNKQI 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + S LR       + +  MK L     + +N   + +R   +    + E +     + + 
Sbjct: 194 QLSSLR-------EQMNSMKQLAADGYLPRNRYLEVQRQFAEVNSSIDETVGRIGQVQKQ 246

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           + E     +  FA+Y +E+   L Q Q   ++  +KL +         I SP+ GT+V  
Sbjct: 247 LQESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLEMANFDLGNTAISSPVDGTVVGL 306

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             F+          LM +VP      + +++  + I  V  G    + F  +   +  K 
Sbjct: 307 NIFTQGGVVGAGDHLMDVVPSQATLVVDSRLKVELIDKVYNGLPVDLMFTAFNQNKTPKI 366

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTL 422
              +  +         N   + YY++ + ++       +  +++ G P EV     + +L
Sbjct: 367 PGTVTLVSADRLVDKAN--GEPYYQMQVTVSPEGMKLLSGEDIKPGMPVEVFVKTGSRSL 424

Query: 423 AQEIIHPITDN 433
              +  PI D 
Sbjct: 425 LSYLFKPILDR 435


>gi|58584567|ref|YP_198140.1| membrane-fusion protein [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58418883|gb|AAW70898.1| Membrane-fusion protein [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 481

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 86/441 (19%), Positives = 164/441 (37%), Gaps = 25/441 (5%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P       +L   GI G+  WS + PI+ +V +SGE++   N   I+    GII K  V+
Sbjct: 47  PLFFGLAVILIFFGIGGI--WSAVAPIDGAVHASGEVIVSSNRKVIQHLGGGIISKILVK 104

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +G PL+   D+     + + K  +      +   ++ L  +   +D +E   E 
Sbjct: 105 EGQVVKKGEPLVLLSDVNERANLSIIKEKL----LSLLVTEARLIAIRGDFDTVEFPDEV 160

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           ++    +   K      K+ N    S+     +   R++ ++   + L ++   +    +
Sbjct: 161 KKLSNDELANKVMKNQIKLLNSQRKSILGKTDILQQRIKQLHNELVGLNSQLGAVFKQYN 220

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++L   + L     + +  +   E+   +   ++         + + I E   E   
Sbjct: 221 LIAEELETKRKLLINGHIGKPHILALEKQFAEIEGKVGYYRAAISQVQQKIGENELEIIN 280

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              +  +  + +L++   + AD   +L + E    +  I SP  G +   +  +     Q
Sbjct: 281 VKNDSQERANTELKEVDTSIADLKERLMVAEDALARTVIRSPQDGIVTDIRYHTEGGVIQ 340

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVK---------------KGYTATVRFPHYADI 358
              P+M IVP +    I AK+  + I+ +                KG    VR   Y+  
Sbjct: 341 SGVPIMSIVPSNDDLIIDAKIQTRNIEEIISAQKKDSNIVSIDGLKGLKVKVRLSAYSSR 400

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
           R      I+  I P         +   YY V + I         N+ L  G PAEV    
Sbjct: 401 RLSLINGIVSHISPDALDD---PRLGRYYSVRVVIPKSELVQFKNVYLYPGMPAEVYIVT 457

Query: 418 KNTTLAQEIIHPITDNWPKIF 438
           ++ TL   +  PI     + F
Sbjct: 458 QSRTLLSFLFMPIIATVDRSF 478


>gi|78484551|ref|YP_390476.1| Type I secretion membrane fusion protein, HlyD [Thiomicrospira
           crunogena XCL-2]
 gi|78362837|gb|ABB40802.1| Type I secretion membrane fusion protein, HlyD [Thiomicrospira
           crunogena XCL-2]
          Length = 430

 Score =  326 bits (837), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 74/432 (17%), Positives = 162/432 (37%), Gaps = 15/432 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M +     L++    S + +  +  + +I L+ W+    ++  V   G+++    +  ++
Sbjct: 1   MSNLSQAALEKPTIKS-QLIVWIMFLVLIWLLVWASYAELDKIVRGQGKVVPSTKIQVVQ 59

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +   GI++   V +G Q+ +G  LL  ++ +     D  +  + +LR      + + +  
Sbjct: 60  NLEGGIVENIFVHSGDQVQKGQILLKLDNTQFVSSYDETEAQLYDLRAQ--AARLSAEAF 117

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +  + +   +   + E + +   + +    +        +   +    + ++  Y     
Sbjct: 118 DKPFKINLPSENPKVEAIFEREKQLYENQLQQLETTQQILNEKITQNRSELQEAY----- 172

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
             N+   L       ++++ +MK L ++   S+ DL +  R    +  +L+   +    +
Sbjct: 173 --NQFKQLSKSYDLLRQEIEIMKPLVKEGIASEVDLLKTRREANDAYSQLQTTQNSIPRL 230

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              INE  ++       +  E  ++L       +   S  T LE    + +I SP+ GTI
Sbjct: 231 KSVINESINKKQEAKQKFRNEAQQELNTVLAKLSQLESSKTALEDRVRRTSITSPVNGTI 290

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 +     Q    ++KIVP      +  K++P  I  V  G  A ++F  Y     
Sbjct: 291 SELLVTTIGEVIQPGSDIIKIVPLDDSLVLETKISPADIGFVYPGLKAKIKFTAYDFAIY 350

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAK 418
                 +EKI       +       +Y   +K     L    N + L  G  A V     
Sbjct: 351 GGLDGTVEKISADTILDEE---GNSFYIARIKTDRNYLGSEKNPLSLLPGMMATVDVVVG 407

Query: 419 NTTLAQEIIHPI 430
             T+ + +I PI
Sbjct: 408 KHTILEYLIKPI 419


>gi|71735575|ref|YP_273253.1| HlyD family secretion protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71556128|gb|AAZ35339.1| HlyD family secretion protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 440

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 76/432 (17%), Positives = 168/432 (38%), Gaps = 10/432 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++  +     +    + ++      TW+ L P+  +V  SG ++ +     ++    GI
Sbjct: 14  DDMPTSDRGIRRVGVAIVLVTFGLFGTWAALAPLGNAVYGSGVVMVQSYRKTVQHLEGGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K+    +G  + +  PL+  +D +     +  +  + + +      ++  D L++   +
Sbjct: 74  VKELLARDGDTVHKDDPLIVLDDSQLRSQYESTRNQLISTQAREARLRAERDELSSIPPL 133

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                +S+         +      +VF    +S    + ++  R+  +    + L +   
Sbjct: 134 TISGTDSQRA------REAIEGEEQVFRTRKNSRQTEISVQRERIGQLKQQIIGLRDMIR 187

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              +L  S+  ++T +K+L  +  V +  L +QER +     E+ +           I+E
Sbjct: 188 TKVSLEKSYSSEITELKDLLSQGFVDKQRLLEQERKLDMLKSEVADLESTITKTQLQISE 247

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +      N+  E++++L   Q    D     T L+    +  I +P  G ++  +  
Sbjct: 248 TELQIIQLNKNFSSEVAKELSDVQAKVFDLQETATALQDRLSRVVIRAPEDGMVLDMKVH 307

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +         PL+ IVP S    + A V    I  +  G    V F  +        + +
Sbjct: 308 TVGGVVSAGTPLLDIVPESSELVVEAHVAINDIDRISIGKLTDVHFSAFNSATTPVIEGV 367

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           + +I     + D     + YY V +K+T+       + +L+ G PAEVL  A   T+ Q 
Sbjct: 368 VTRISADRLKDD---AGEPYYLVRVKLTEKGLKRLGDRKLQPGMPAEVLINAGERTMLQY 424

Query: 426 IIHPITDNWPKI 437
           ++ P +  + K 
Sbjct: 425 LMKPASSVFIKS 436


>gi|315637082|ref|ZP_07892305.1| LapA secretion membrane fusion protein [Arcobacter butzleri JV22]
 gi|315478618|gb|EFU69328.1| LapA secretion membrane fusion protein [Arcobacter butzleri JV22]
          Length = 489

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 65/422 (15%), Positives = 156/422 (36%), Gaps = 15/422 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +H   L  + +  ++ I   + WS    I+     SG+++       ++    GI+++  
Sbjct: 71  HHSKKLHWVVIAFLVTIFSFLIWSSFAEIDEIARGSGKVVPSGQNQIVQHLEGGIVQEIL 130

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +   L+   + ++T  +   ++     +  I   ++ L      Y++ +   
Sbjct: 131 VKEGDFVNKDQVLIRVSNEKSTSTVASNELKSYYYKAQIKRLEAELKREPFVYEITDN-- 188

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                     L ++ +  ++ +      +   + +   +++       D +     ++  
Sbjct: 189 --------QQLNEFLNNENEFYLTNTKQLESKVNILKEQIKQKENELKDAQQTIEHMKFS 240

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           + +  K++ M K + E+   SQ D  + +R    +  +L+  I     +   I EL  + 
Sbjct: 241 VGAISKEVQMTKPMVERGIRSQVDFLKLQREESDAKNKLQSVILSVDKINSEIIELNKKI 300

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           +  +  Y  +I   L +      D  +          + T++SP  G +      +    
Sbjct: 301 DETYGVYDAQIREKLNETYTQLKDIEANNVASVDQVTRNTVISPSNGIVQKLHVNTIGGA 360

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            + S  L++IVP      +  K+ PK I  + +G  A V+F  +           +  I 
Sbjct: 361 IKPSSDLLEIVPTDHKLIVEVKILPKDIAFIYQGQKAIVKFSAFDFSIYGGLDGHVINIS 420

Query: 372 PIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           P    + +      +Y V ++     +   +N+  +  G  A+V       T+   I+ P
Sbjct: 421 PDTITEKDEKT---FYIVRIETEKNYIGKEENSKHIIPGMVADVDIMTGKKTVLDYILKP 477

Query: 430 IT 431
           I 
Sbjct: 478 IL 479


>gi|332159752|ref|YP_004296329.1| HlyD family secretion protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325663982|gb|ADZ40626.1| HlyD family secretion protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861656|emb|CBX71834.1| alkaline protease secretion protein aprE [Yersinia enterocolitica
           W22703]
          Length = 443

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 79/439 (17%), Positives = 161/439 (36%), Gaps = 15/439 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H     L+ N    L    LL   G IG + W+ L P++  ++  G I+  +N   ++  
Sbjct: 14  HQKPPPLQTNSGRYLGLGALLVCGGFIGSLLWAGLAPLDKGIAVMGHIVVAENRKLVQPL 73

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDF 119
             G I++  V  G  + QG  L+T +D       D +  + +S       +  E+  L  
Sbjct: 74  QGGRIQQLHVAEGDDVTQGQLLITLDDTALLSHRDNLQNQYLSALAQESRLTAEQHELPA 133

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +     +L+   ++  E+      +      +     I+ +   +    +R+  + + R 
Sbjct: 134 ITFPPALLQYPAQALVERNTVLQQQLFLHRRQAQLSDIARLSAQITRHESRLDGLQVAR- 192

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
                    +      Q+ L  ++ L +   V+Q+ L + ER        + +N  E   
Sbjct: 193 ------GHNQRQFDLFQRQLQGVQLLAKNGHVAQSQLLEMERQAISLRANIEKNTSEILE 246

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E           Y  E    L + Q+   +   +L I E   +   I +P++GT
Sbjct: 247 LHKQIGETEQHILQRREQYKSENREQLAKAQQNTQELEQRLGIAEYELDNTRIYAPVSGT 306

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           ++     +        Q LM++VP+ +     A++    I  V  G    + F  +    
Sbjct: 307 VIALAQHTVGGVVSTGQTLMELVPNGQPLLAEAQLPVSLIDKVMVGLPVDLNFSAFNQSS 366

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             + +  +  +     Q  N    + YY + + I     +   +E+R G   ++      
Sbjct: 367 TPRLQGSVLHVGADRIQ--NPHTLEPYYPLTVAID---ITQTELEIRPGMSVDIFIRTGE 421

Query: 420 TTLAQEIIHPITDNWPKIF 438
            +L   +  P+TD     F
Sbjct: 422 RSLLNYLFKPLTDRLHVAF 440


>gi|92118446|ref|YP_578175.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
 gi|91801340|gb|ABE63715.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
          Length = 447

 Score =  326 bits (836), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 158/439 (35%), Gaps = 14/439 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +L R+         ++    I+G   W    PI  +V +SG  +       I+    G+I
Sbjct: 14  DLPRSTRGHTIAGMVIIATTIMGFGVWGNTAPIAGAVVASGVFVATGQNKTIQHLEGGVI 73

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNKY 124
               V  G  +  G  L+  +       +    L+   +  +   +  +      +N   
Sbjct: 74  SDIMVHEGDTVEPGQILVKLDRTTAKAEMQRLFLRNARLTAVDARLQAQVREEAEVNFPP 133

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D+   + + +   ++       +      N  I+ +  S+K    R+    +       +
Sbjct: 134 DLAPDSKDPQIRSIVSAQLLAFTAQRNNTNSEIAGIEDSIKALNERIAGSKV-------Q 186

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            + +R  ++  ++D+   ++L     V + D+   +R       E+   + +  +    I
Sbjct: 187 LAGVRRQIALVEEDIKTKEHLLAAGLVRKPDVLLLQRNQANLEGEVGRIMGDIGDAKERI 246

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               ++ N      +K     + + +    D   ++       ++ TI +P+ G +V  +
Sbjct: 247 ARAVEQINGVRKTAIKTAVEQMHEARGELVDVRERMLSARGVLDRTTIRAPVKGVVVKLR 306

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +     +  +P+M+++P ++   I A+V P+ I  VK G  A VR    +        
Sbjct: 307 FHTRGGVVEPGKPIMELLPLNEPLIIEARVRPQDIDSVKHGQEAMVRLTALSQRVTPMVS 366

Query: 365 AIIEKIDPIISQQDNNLQ---TQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
             +  +       +   Q     + Y V +++ +   +  +      G PAEV       
Sbjct: 367 GDVIYLSADTVADEKKSQQLGPSDIYVVRVRLHNSEVAAIHGFNPTPGMPAEVFIKTSER 426

Query: 421 TLAQEIIHPITDNWPKIFE 439
           T  Q I+ PI D+  + F 
Sbjct: 427 TFFQYIMKPIEDSMSRAFR 445


>gi|88811907|ref|ZP_01127160.1| Type I secretion membrane fusion protein, HlyD [Nitrococcus mobilis
           Nb-231]
 gi|88790791|gb|EAR21905.1| Type I secretion membrane fusion protein, HlyD [Nitrococcus mobilis
           Nb-231]
          Length = 416

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 70/423 (16%), Positives = 163/423 (38%), Gaps = 13/423 (3%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
            +  ++   G  TW+ + P+  +  + G +  + N  +++    GIIK   V +G ++  
Sbjct: 1   MVAILVAFGGFGTWAAIAPLASAAIAPGVVTVDSNHKKVQHLEGGIIKTLLVRDGDKVKA 60

Query: 81  GTPLLTFEDIETTDLIDLKKV---SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           G  L+  ++ +    + + +    + + L   +  E+     +    D+L++  +    +
Sbjct: 61  GDVLVQLDETQPQASLAILQTKSDAARALEARLLAERDDAAEIEFADDLLKRRVDPNVAE 120

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL       S    +F    +++     +  +R+  +  +   +  +       +   + 
Sbjct: 121 LL-------SGQETLFEARRNALKGETIILESRIEQLKNDIAGVRAQQKAKEHQIELVED 173

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +   ++ L +K  V +      ER V +   E  E+I E       I E   +    +  
Sbjct: 174 EARSLQKLLQKGYVGKPRYLALEREVARLEGERGEHISEIAQANTKIGETKLQIIQLWRE 233

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           + ++++ +L   Q    D   ++   +   E   I +P++G++V     +     +  + 
Sbjct: 234 FQEKVADELRSIQADILDLKERIRAAQHVLEHIEIRAPVSGSVVGMAVHTVGGVIKAGET 293

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++ IVP      I A+V P+ I +V  G  A +RF  +           +  I       
Sbjct: 294 VLDIVPVDDRLIIEARVQPQDIDNVHIGQEANIRFTAFKRRNTPSLVGHVSYISADRIVD 353

Query: 378 DNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
                 + YY+  L ++D   +   +  L+ G PAEV+      T  + +  P  D+  +
Sbjct: 354 SRT--GEAYYKARLAVSDNEVARLGDKHLQPGMPAEVMIKTGEGTAIEYLARPFLDSLER 411

Query: 437 IFE 439
            + 
Sbjct: 412 AWR 414


>gi|318603884|emb|CBY25382.1| ABC exporter for hemopore HasA, membrane fusion protein (MFP)
           family component HasE [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 443

 Score =  326 bits (835), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 79/439 (17%), Positives = 161/439 (36%), Gaps = 15/439 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H     L+ N    L    LL   G IG + W+ L P++  ++  G I+  +N   ++  
Sbjct: 14  HQKPPPLQTNSGRYLGLGALLVCGGFIGSLLWAGLAPLDKGIAVMGHIVVAENRKLVQPL 73

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDF 119
             G I++  V  G  + QG  L+T +D       D +  + +S       +  E+  L  
Sbjct: 74  QGGRIQQLHVAEGDDVTQGQLLITLDDTALLSHRDNLQNQYLSALAQESRLTAEQHELPA 133

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +     +L+   ++  E+      +      +     I+ +   +    +R+  + + R 
Sbjct: 134 ITFPPALLQYPAQALVERNTVLQQQLFLHRRQAQLSDIARLSTQITRHESRLDGLQVAR- 192

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
                    +      Q+ L  ++ L +   V+Q+ L + ER        + +N  E   
Sbjct: 193 ------GHNQRQFDLFQRQLQGVQLLAKNGHVAQSQLLEMERQAISLRANIEKNTSEILE 246

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E           Y  E    L + Q+   +   +L I E   +   I +P++GT
Sbjct: 247 LHKQIGETEQHILQRREQYKSENREQLAKAQQNTQELEQRLGIAEYELDNTRIYAPVSGT 306

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           ++     +        Q LM++VP+ +     A++    I  V  G    + F  +    
Sbjct: 307 VIALAQHTVGGVVSTGQTLMELVPNGQPLLAEAQLPVSLIDKVMVGLPVDLNFSAFNQSS 366

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             + +  +  +     Q  N    + YY + + I     +   +E+R G   ++      
Sbjct: 367 TPRLQGSVLHVGADRIQ--NPHTLEPYYPLTVAID---ITQTELEIRPGMSVDIFIRTGE 421

Query: 420 TTLAQEIIHPITDNWPKIF 438
            +L   +  P+TD     F
Sbjct: 422 RSLLNYLFKPLTDRLHVAF 440


>gi|4063018|gb|AAD09854.1| ABC transporter TliE [Pseudomonas fluorescens]
          Length = 433

 Score =  326 bits (835), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 68/432 (15%), Positives = 154/432 (35%), Gaps = 14/432 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R+    ++   LL+++G  G   W+ L P++  +   G ++       +++   G++ +
Sbjct: 8   QRDARFFVRMGWLLTVVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTFSPGVVSR 67

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDV 126
             V  G  + QG PL   +  +    +   +   +          +E+     ++   + 
Sbjct: 68  ILVREGETVKQGQPLFRLDQTQNQADVQSLQAQYRLAWASVARWQSERDNRSSIHFPAE- 126

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L    +     +L+   +  S+  + F    + +  ++     ++  +   R DL  ++ 
Sbjct: 127 LSSNPDPALALVLEGQRQLFSSRREAFAREQAGIRANIDGATAQLGGMRRARSDLTAQAQ 186

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LR  LS        ++ L +   + +N L + +R + +   +L +N  E   + + I E
Sbjct: 187 SLRDQLS-------NLQPLADNGYIPRNRLMEYQRQLSQVQQDLAQNTGESGRVEQGILE 239

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +       Y KE+   L   Q        +LT      +   I +P  G  V     
Sbjct: 240 SRLKLQQHSEEYQKEVRSQLADAQLRSLTLEQQLTSAGFDLQHSEINAPADGIAVNLGVH 299

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +  + L++IVP      +   +    +  V       + F  +   R  +    
Sbjct: 300 TEGAVVRAGETLLEIVPQGTRLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGE 359

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  I     Q  +      YY +   ++D A      + ++ G PAE+       +L   
Sbjct: 360 VSLISAD--QMLDEKTGAPYYVLRTTLSDAAEQKLQGLVIKPGMPAEMFVRTGERSLLNY 417

Query: 426 IIHPITDNWPKI 437
           +  P+ D     
Sbjct: 418 LFKPLLDRAGSA 429


>gi|77456364|ref|YP_345869.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           fluorescens Pf0-1]
 gi|77380367|gb|ABA71880.1| HylD like membrane fusion protein component of ABC transporter
           required for LapA secretion [Pseudomonas fluorescens
           Pf0-1]
          Length = 455

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 69/426 (16%), Positives = 155/426 (36%), Gaps = 14/426 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L  + P  ++      I   + L+ W+    I+      G+ +    + +I++   GI
Sbjct: 31  KALIEDAPRVVRLTIWAIIGFFVFLMLWANFAVIDEVTKGDGKAIPSSKIQKIQNLEGGI 90

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF--LNNKY 124
           + +  V+ G  +  G PL+  +D      +   +    ++   ++   + +D   LN   
Sbjct: 91  VSELFVKEGQIVEAGAPLVRLDDTRFASNVGETEADRLSMLLRVERLSAEVDDRPLNFPE 150

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DVL+             +     +   ++      ++  +     ++        +  +K
Sbjct: 151 DVLKA------------VPGQAKSEESLYISRRQQLHDEVGGLQEQLIQRQQELREFTSK 198

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  R  L   ++++ M + L  + AVS  ++ + +R   ++  +L             I
Sbjct: 199 QAQYRQQLGLQRQEINMSEPLVAQGAVSPVEVLRLKRAEVETRGQLDATTLAIPRAESAI 258

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E+  + +     +  E    L + +       +    LE    +  + SP+ G +    
Sbjct: 259 KEVQRKIDETRGKFRSEALTQLNEARTDLNKAQATGKALEDRVSRTLVTSPVRGIVNKML 318

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +     Q    L++IVP      + AK+ P+ I  +  G  ATV+F  Y        K
Sbjct: 319 VNTIGGVIQPGSDLLEIVPLDDTLLVEAKIRPQDIAFLHPGQEATVKFTAYDYTIYGGLK 378

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           A +E+I       ++   T    ++  + + L   +  + +  G  A V       T+  
Sbjct: 379 AKLEQIGADTITDEDKKTTYYVIKLRTERSHLGTDEKPLLIIPGMVASVDIITGKKTVLS 438

Query: 425 EIIHPI 430
            ++ PI
Sbjct: 439 YLLKPI 444


>gi|167031204|ref|YP_001666435.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida GB-1]
 gi|166857692|gb|ABY96099.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida GB-1]
          Length = 458

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 72/427 (16%), Positives = 151/427 (35%), Gaps = 14/427 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L  + P  ++      I+  + LI W+ + PI+      G+ +    V +I++   GI
Sbjct: 34  KALIEDAPRVVRLTIWGVILFFVFLIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGI 93

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +   + G  +  G PLL  ++      +   +     +   ++   + +     K D 
Sbjct: 94  VAEIFAKEGEIVEVGQPLLRLDETRFASNVGETEADRLAMALRVERLSAEVQDSPLKID- 152

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                    E+L        ++   ++      +   +     ++        +  +K +
Sbjct: 153 ---------EELRKAAPSQAASEESLYQSRRQQLQDEIGGLQQQLVQRQQELREYSSKRA 203

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L   +K++ M + L    A+SQ ++ +  R   ++  +L             I E
Sbjct: 204 QYANSLELLRKEIGMSEPLVATGAISQVEVLRLRRAEVENRGQLDSTALAIPRAEAAIRE 263

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  +       +  E    L + +       +    L+    +  + SP+ G +      
Sbjct: 264 VQSKIEETRGKFRSEALTQLNEARTELNKATATSKALDDRVHRTMVTSPVRGIVKQLLVN 323

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    +++IVP      I AK+ PK I  +  G  ATV+F  Y        KA 
Sbjct: 324 TIGGVIQPGSDIIEIVPLDDTLVIEAKILPKDIAFLHPGQEATVKFTAYDYTIYGGLKAK 383

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I       ++   T  YY + L+     L   +  + +  G  A V       T+  
Sbjct: 384 LEQIGADTITDEDKKTT--YYLIKLRTDRSHLGTDEKPLLIIPGMVATVDIMTGKKTIMS 441

Query: 425 EIIHPIT 431
            ++ PI 
Sbjct: 442 YLLKPIM 448


>gi|167034352|ref|YP_001669583.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida GB-1]
 gi|166860840|gb|ABY99247.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida GB-1]
          Length = 446

 Score =  325 bits (834), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 67/430 (15%), Positives = 145/430 (33%), Gaps = 14/430 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              +    + I G  G + WS L P++  V ++G +    N   ++    G ++   V  
Sbjct: 24  RPARWGVWMVIAGFGGFLLWSCLAPLDAGVVATGTVKVTSNRKAVQHLSGGTVEAILVRE 83

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEK-A 130
           G  + +G  ++  + +                K +   ++ E+   D +     +LE   
Sbjct: 84  GDVVKKGQEVVRLDALRAVAEQGALSAQYIVSKTVENRLEAERDGRDNVTFDPALLEHYG 143

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            + R    +D   +   T        ++ +  +L     +++        L+       +
Sbjct: 144 SDPRLLAAMDLQQRLLDTRRAGLAGELNILEENLTASAVQLK-------GLQQVYGARAS 196

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            +    ++L   + L  +  V +N L + ER          EN++          E+   
Sbjct: 197 QIGFLNQELQGTRVLAAEGYVPRNRLLELERSNADLAAGQAENLNNIARARSQATEIKLR 256

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                 +YLKE+   L    +       +L  L+       I SPI G +      +   
Sbjct: 257 MLQRQHDYLKEVESQLTDTAKENTTLADRLRALDYEVTHTVIRSPIDGMVQGLSIATVGG 316

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q    +M++VP  +   + A +  + I  +  G    + FP +   +       ++ I
Sbjct: 317 IIQPGAKIMEVVPLDQPLQVDAMIPVQAIDKMVPGLAVDIAFPAFNHAQTPNIPGRVKTI 376

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                  +     Q +Y   +++T        +  +R G PA V        L   ++ P
Sbjct: 377 SADRLLDE--ESKQPFYLAQVEVTPTGMGLLGSNHIRPGMPATVTIKTGERNLLSYLLKP 434

Query: 430 ITDNWPKIFE 439
           + +     F+
Sbjct: 435 MLERVDAAFK 444


>gi|319777873|ref|YP_004134303.1| type I secretion membrane fusion protein, hlyd family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317171592|gb|ADV15129.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 436

 Score =  325 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 74/443 (16%), Positives = 166/443 (37%), Gaps = 13/443 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M       + R     L      SI+ + G  + + ++ +  +V  SG+++ + +V +++
Sbjct: 1   MPERATSVIDRAIRRYLLGGIATSILLVGGAGSLAAVIDLSGAVIGSGKLVVDSSVKKVQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSAL 117
            P  G++ +  V  G  +  G  L+  ++  T   + +       +      +  E+   
Sbjct: 61  HPTGGVVGQIFVREGDAVQAGQVLIHLDETVTRANLAIVTKSADELDARLARLKAERDGA 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D +     ++ +  +         +    +    +F +   +          R+  +   
Sbjct: 121 DAIGFPPSLMSRRDDP-------DVSGTMAGEQSLFEFRRQARAGQKAQLAERISQLAEE 173

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              L  +       +     +L  M+ L+E+  VS + +   ER   +   E  + I   
Sbjct: 174 VSGLTEQKDAKSQEIKLIGTELAGMRTLWERKLVSIDRITALEREAVRLEAEHGQLIAAI 233

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                H +E+  +      +   E++ +L + Q   ++ + +    E   ++  I SP A
Sbjct: 234 AQSKGHTSEIRLQIIQIDQDLRSEVATELREVQAKLSELVERKVSAEDQLKRIDIRSPQA 293

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G ++     +        +P+M IVP +    + A+V P+ I  +K+G  AT+R   +  
Sbjct: 294 GVVLQLAVHTIGGVITAGEPVMLIVPVADRLTVEARVAPQDIDQLKQGQEATLRLSAFNQ 353

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFT 416
               +    + KI   +S  +       YY V + +     +    + L  G P EV FT
Sbjct: 354 RTTPELNGSVSKISADLSTDERTGAG--YYTVHIVLPRTELARLKRLTLAPGMPVEVFFT 411

Query: 417 AKNTTLAQEIIHPITDNWPKIFE 439
             + T+   ++ P+ D   + F 
Sbjct: 412 TSSRTMLSYLVKPLADQIQRAFR 434


>gi|27383024|ref|NP_774553.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110]
 gi|27356197|dbj|BAC53178.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110]
          Length = 456

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 69/410 (16%), Positives = 163/410 (39%), Gaps = 13/410 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+  + I  ++ + G+++ E NV +++ P  G++ + +  +G  +  G  ++  +D  T 
Sbjct: 54  WAATVQISGALIAPGQVVVESNVKKVQHPTGGVVGELRARDGDVVKAGDVVVRLDDTVTK 113

Query: 94  DLIDLKKVSIKNLRCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + +   ++            E+  +D ++    +L++  +   + LL       S  +
Sbjct: 114 ANLAIVTKNLDAALARAARLQAEQRGIDRIDFPQSLLDRGNDYDVKTLL-------SAET 166

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K+F+  ++           R++ +      L  +       +S  Q++LT +++L+EK+ 
Sbjct: 167 KLFDVRVNGRAGQKAQLRERIQQLNEEIEGLSAQERAKDKEISLVQQELTGVRDLYEKHL 226

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V  + L   ER   +   E  + I  +      I E   +      + + E+S+DL +  
Sbjct: 227 VQISRLTTLERDSARLNGERAQYIASRAQAKGKITETELQIIQVDKDMVSEVSKDLRETN 286

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               + + +    E    +  I +P  G ++ +   +          LM IVP +    +
Sbjct: 287 DKIGELIERKVAAEDQLRRVDIRAPQDGMVLQSTVHTVGGVVTAGDALMLIVPQADDLQV 346

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            AKV P  I  ++ G    +R   +      +   ++ ++ P ++        Q YY + 
Sbjct: 347 EAKVNPVDIDKLQIGQKTLLRLSAFNQRTTPELNGVVSRVSPDVTTDQRT--GQSYYTIR 404

Query: 391 LKIT-DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           + +  +      + +L  G P E      + T+   ++ P+ D   + F 
Sbjct: 405 VSLPAEEVVRLGDSKLIPGMPVEAFVQTGDRTMLSYLMKPLHDQLMRAFR 454


>gi|268679429|ref|YP_003303860.1| type I secretion membrane fusion protein, HlyD family
           [Sulfurospirillum deleyianum DSM 6946]
 gi|268617460|gb|ACZ11825.1| type I secretion membrane fusion protein, HlyD family
           [Sulfurospirillum deleyianum DSM 6946]
          Length = 440

 Score =  325 bits (833), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 72/429 (16%), Positives = 165/429 (38%), Gaps = 15/429 (3%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           + + + +  P S ++M  + +I I  L+ W+ +  I+      G+++    +  I++   
Sbjct: 15  LSEAVLQKAPNSSRKMIWIMVISIGWLLLWASIAEIDELTRGEGKVIPSQQLQVIQNLEG 74

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ +  V+ G ++ +G  LL  +D          ++    L+      ++  +    + 
Sbjct: 75  GIVSEILVKEGDRVKKGQILLKIDDKNFASSYGENRLRYIELKAKSMRLEAEANAEAFEV 134

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                      + L + + +       ++N     + ++ ++   +++       +LE+K
Sbjct: 135 S----------QDLDEQMQQQIVYEKSLYNSNQEQLTKTFQILNEQIKQKESELTELESK 184

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            + L       +K++ +M  L +K  VS+ +  Q +R       EL+ +      +   I
Sbjct: 185 VAQLSTSYDLVKKEIDIMAPLVKKGLVSEMEFLQLKRQTNNVQGELQTSRLAIPRVKSAI 244

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E+ ++      N+     ++L +     +      T LE   ++  + +P+ GT+    
Sbjct: 245 AEVQNKRLEAELNFQNRAKKELNEIIAEMSRLNEAQTSLEDRVKRTLVRAPVDGTVKQLL 304

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             + S   +    +++IVP      + AKV P  +  ++ G  A V+F  Y         
Sbjct: 305 VNTVSGVVKPGMDILEIVPSEDTLLVEAKVKPSDVGFLRLGLDAMVKFTAYDFSIYGGLA 364

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTL 422
             +  I         N + + YY V +K     L   +  +EL  G    V       T+
Sbjct: 365 GKVVFISADTI---TNERGETYYIVHIKTDKNHLGTVEKPLELMVGMTTSVDILTGKKTV 421

Query: 423 AQEIIHPIT 431
              ++ PI 
Sbjct: 422 LDYLLKPIL 430


>gi|119776392|ref|YP_929132.1| HlyD family secretion protein [Shewanella amazonensis SB2B]
 gi|119768892|gb|ABM01463.1| HlyD family secretion protein [Shewanella amazonensis SB2B]
          Length = 460

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 67/448 (14%), Positives = 165/448 (36%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P S +         I   + W+    ++     +G+++    +  I+
Sbjct: 12  MVDDVYGAMMTDAPTSHRLTIWALTSLIFAFLIWAYFAELDQVTVGTGKVIPSSQIQVIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   G++++  V  G+ + +G PL   +D         ++  + +L+ ++   ++ L+ +
Sbjct: 72  SLDGGVLQELFVREGNIVAKGEPLARIDDTRFRSDFAQQEEEVFSLQANVIRMRTELNSI 131

Query: 121 NNKYDVLEKAFESR--------EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  +   + R         + L     +  +     +N  + ++   L++   +++
Sbjct: 132 TVSDMASDWREQVRIVKQELIFPDALSAQKAELVARQQAEYNGRLDNLENQLEILARQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +L  K + +        ++L + + L +K  V + +L + ER V +   EL+ 
Sbjct: 192 QRQQENEELTTKIATMTTSFQLISRELELTRPLAQKGIVPEVELLKLERTVNELQGELKA 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +   ++E   +       +  +    L   Q   +         +    +  I
Sbjct: 252 MRQLRPKIKATLDEAILKRREAVFVFAADTRAQLNDMQTRLSRMSEAQVGAQDKVSKAVI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GT+      +     Q    +M+IVP      I AK+TPK I  +  G  A V+ 
Sbjct: 312 TSPVNGTVKTVHINTLGGVVQPGVDIMEIVPSEDQLLIEAKITPKDIAFLHVGLPAVVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R    +  +E I    +Q +       +Y + ++  + +   ++   + +  G 
Sbjct: 372 TAYDFTRYGGLQGTVEHISADTTQDEE---GNSFYLIRVRTAESSLVKDDGTEMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTSVDVITGQRSILEYILNPILRAKDTA 456


>gi|167625829|ref|YP_001676123.1| HlyD family type I secretion membrane fusion protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167355851|gb|ABZ78464.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           halifaxensis HAW-EB4]
          Length = 460

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 71/448 (15%), Positives = 167/448 (37%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + PAS +         II  + W+    ++   +  G+++    V  I+
Sbjct: 12  MVDDVYGAMMTDAPASHRLTIWALTALIITFLLWAYFAELDQVTTGMGKVIPSSQVQVIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSAL 117
           S   G++++  V+ G  + +G PL+  +          ++  + +L      ++ E +++
Sbjct: 72  SLDGGVLQEMYVQEGLIVTKGQPLVRIDATRFQSDFAQQEQEVNSLSANVIRLNAELNSI 131

Query: 118 DFLNNKYDVLEKAFESREE-----QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  D  E+   S +       L D   +  S   + +   + ++   L+++  +++
Sbjct: 132 TISAITNDWREQVKISPQALIFPSSLEDSEPELTSRQREEYVGRLDNLSNQLEIQARQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +L +K   L        ++L + + L +K  V + +L + +R+V     EL  
Sbjct: 192 QRNQEIQELASKIRTLTTSFQLVSRELELTRPLADKGIVPEVELLKLQRVVNDIQGELAS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +   ++E   +       Y  +    L + Q   +         +    +  I
Sbjct: 252 LRLLRPKVKSTMDEAILKRRESVLIYAADTRAQLNEMQTKLSRMNEAQVGAQDKVSKAEI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      I  K+ PK I  +  G  A V+ 
Sbjct: 312 VSPVNGTVKTVHINTLGGVVQPGVDIIEIVPSEDKLLIETKIVPKDIAFLHPGLPAVVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R      ++E I    +Q +       +Y V ++    + + ++   + +  G 
Sbjct: 372 TAYDFTRYGGLNGVVEHISADTTQDEE---GNSFYIVKVRTEFSSLTKDDGTEMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTSVDVITGQRSVLEYILNPILRAKDTA 456


>gi|209550553|ref|YP_002282470.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209536309|gb|ACI56244.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 435

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 75/434 (17%), Positives = 170/434 (39%), Gaps = 13/434 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR+    +  + +LSI  + G+  W+    +  +V   G ++   +V +++    GI+ K
Sbjct: 9   KRSLNRHVALVGVLSIALVCGIGGWAATTELSSAVIGEGVVVVNGDVKKVQHLTGGIVSK 68

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV 126
             V     +  G  L+  +   T   + + + ++  L   R  +  E+   +  + + ++
Sbjct: 69  LLVSENDHVTAGQILIQLDGTTTKAQLSIVESTLAQLYARRARLKAERIDAESFDVEENI 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +    +    LLD         +K+F+   S++        +R   +      L  + +
Sbjct: 129 SDLTSSTAARDLLD-------GETKLFDSRRSALVGMKSQLASRKDQLAEQIKGLVVQIN 181

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                LS  +++L  +  L++K  V+   LN  +R          + I  +        E
Sbjct: 182 ATNDSLSLIEQELEGVDTLYKKGLVTLQRLNALKRARADLQGNSGQEIAAKAEAEGKAIE 241

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  ++     +   EI+++L   +   A+   +         +  I++P++G I      
Sbjct: 242 IDRQSLQLDEDRRSEIAKELTDVEAKIAENEERRGTALDQLRRLDIVAPLSGRIHELSIH 301

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           + +      + LM +VP ++   ++A+V  + I  +  G +  VRF  +        +  
Sbjct: 302 TVNGVVNPGETLMLVVPENEDLTVQARVATRDIDQLHVGQSVDVRFSAFDQRTTPDVRGE 361

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           I  I P + + +       YY + +K    + +   +I+L  G PAEV     +  +   
Sbjct: 362 ITSIAPDVVKDERT--GISYYPLRVKPEAESIAKLKSIKLYPGMPAEVFIKIADRNVISY 419

Query: 426 IIHPITDNWPKIFE 439
           +  P+TD    +F 
Sbjct: 420 LTKPLTDQMQHVFR 433


>gi|157737367|ref|YP_001490050.1| HlyD family secretion protein [Arcobacter butzleri RM4018]
 gi|157699221|gb|ABV67381.1| HlyD family secretion protein [Arcobacter butzleri RM4018]
          Length = 489

 Score =  325 bits (833), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 65/422 (15%), Positives = 156/422 (36%), Gaps = 15/422 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +H   L  + +  ++ I   + WS    I+     SG+++       ++    GI+++  
Sbjct: 71  HHSKKLHWVVIAFLVTIFSFLIWSSFAEIDEIARGSGKVVPSGQNQIVQHLEGGIVQEIL 130

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +   L+   + ++T  +   ++     +  I   ++ L      Y++ +   
Sbjct: 131 VKEGDFVNKDQVLIRVSNEKSTSTVASNELKSYYYKAQIKRLEAELKREPFVYEITDN-- 188

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                     L ++ +  ++ +      +   + +   +++       D +     ++  
Sbjct: 189 --------QQLNEFLNNENEFYLTNTKQLESKVNILKEQIKQKENELKDAQQTIEHMKFS 240

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           + +  K++ M K + E+   SQ D  + +R    +  +L+  I     +   I EL  + 
Sbjct: 241 VGAISKEVQMTKPMVERGIRSQVDFLKLQREESDAKNKLQSVILSVDKINSEIIELNKKI 300

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           +  +  Y  +I   L +      D  +          + T++SP  G +      +    
Sbjct: 301 DETYGVYDAQIREKLNETYTQLKDIEANNVASVDQVTRNTVISPSNGIVQKLHVNTIGGA 360

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            + S  L++IVP      +  K+ PK I  + +G  A V+F  +           +  I 
Sbjct: 361 IKPSSDLLEIVPTDHKLIVEVKILPKDIAFIYQGQKAIVKFSAFDFSIYGGLDGHVINIS 420

Query: 372 PIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           P    + +      +Y V ++     +   +N+  +  G  A+V       T+   I+ P
Sbjct: 421 PDTITEKDEKT---FYIVRIETEKNYIGKEENSKHIIPGMIADVDIMTGKKTVLDYILKP 477

Query: 430 IT 431
           I 
Sbjct: 478 IL 479


>gi|170720592|ref|YP_001748280.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida W619]
 gi|169758595|gb|ACA71911.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida W619]
          Length = 441

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 80/423 (18%), Positives = 167/423 (39%), Gaps = 10/423 (2%)

Query: 15  ASLKRMTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
             ++R+ L +  +      TW+ + P+  +V  SG +  ++    ++    GI+K+    
Sbjct: 21  RGIRRIGLTIVFVTFGIFGTWAAVAPLSNAVHGSGVVTVQNYRKTVQHLEGGIVKELLAR 80

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +G  + QG PL+  ++ + +   +  +  +   R      ++  D L     V     +S
Sbjct: 81  DGDMVKQGDPLIVLDEAQLSSEYESTRNQLIVARYKEARLRAERDGLQAIPPVTMDGTDS 140

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                 D   +  +   +VF     ++   + +   R+  +      L +     R L  
Sbjct: 141 ------DRAMEALAGEQQVFKARHDALQGEISVNRERIEQMKQQIAGLNDMIRTKRNLEK 194

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           S+  ++  +K L  +  V    L +QER +     E+ ++          I E   +   
Sbjct: 195 SYTGEIKQLKELLAEGFVDNQRLLEQERKLDLLKTEVADHESTITKTKLQIGETELQIVQ 254

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               +  +++ +L + Q    D   K   L     +  I +P +G ++  +  +      
Sbjct: 255 LKKKFDSDVANELSEVQAQVFDLQEKEAALRDRLSRVVIRAPESGMVLDMKVHTIGGVVS 314

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            + PL+ IVP S    + AKV  K I  ++ G TA +RF  +        +  + +I   
Sbjct: 315 AATPLLDIVPASSELVVEAKVATKDIDRLELGKTADIRFSAFNQATTPVIEGTLIRISAD 374

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
              ++       YY V +K+T+       N +L+ G PA+VL  A + T+ Q ++ P  +
Sbjct: 375 SLTEERT--GDPYYLVRVKVTEDGMEKLGNRKLQPGMPADVLINAGDRTMLQYLLKPARN 432

Query: 433 NWP 435
            + 
Sbjct: 433 MFA 435


>gi|75675156|ref|YP_317577.1| type I secretion membrane fusion protein, HlyD [Nitrobacter
           winogradskyi Nb-255]
 gi|74420026|gb|ABA04225.1| type I secretion membrane fusion protein, HlyD [Nitrobacter
           winogradskyi Nb-255]
          Length = 447

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 67/439 (15%), Positives = 163/439 (37%), Gaps = 14/439 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +L R+         ++  + ++G   W    PI  +V +SG  +       I+    G+I
Sbjct: 14  DLPRSTRGLTLAGVVIVAVTVLGFGVWGNTAPIAGAVVASGVFVATGQNKIIQHLEGGMI 73

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNKY 124
            + +V  G  +  G  L+  +       +    L+   +  L   +  +      ++   
Sbjct: 74  DEIKVREGDTVEPGQILVELDRTSAKAEMQRLFLRNARLTALDARLQAQVREETEVHFPP 133

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++   + + +   +++      +      N  I+ +  S+K    R+    +       +
Sbjct: 134 ELASDSKDPQIRSIVNAQLLSFTAQRNNANSDIAGIEDSIKALNERIAGSKV-------Q 186

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              +R  ++  ++D+   ++L     V + ++   +R       E+   + +  +    I
Sbjct: 187 LDGVRRQIALIEEDIKTKEHLLAAGLVRKPEVLLLQRNQANLEGEVGRIMGDIGDAKERI 246

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +   ++ N      +K     + + +   AD   ++   +   ++ TI +P+ G +V  +
Sbjct: 247 SRAVEQINGVRKVAIKTAVEQMHEVRGELADVRERMQSAKGVLDRTTIRAPVKGVVVKLR 306

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +     +  +P+M+++P  +   I A+V P+ I  VK G  A VR    +        
Sbjct: 307 FHTRGGVVEPGKPIMELLPLDEPLIIEARVRPQDIDSVKHGQEAMVRLTALSQRITPMVS 366

Query: 365 AIIEKIDPIISQQDNNLQ---TQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNT 420
             +  +       +   Q     + Y + +++ +    + +      G PAEV       
Sbjct: 367 GDVIYLSADTVADEKKSQQTGPSDIYVIRVRLNNAEVVAIHGFHPTPGMPAEVFIKTSER 426

Query: 421 TLAQEIIHPITDNWPKIFE 439
           T  Q I+ PI D+  + F 
Sbjct: 427 TFFQYIMKPIDDSMSRAFR 445


>gi|167584379|ref|ZP_02376767.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ubonensis Bu]
          Length = 474

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 63/414 (15%), Positives = 141/414 (34%), Gaps = 13/414 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +   ++   +  + W+    ++      G+++    V  +++   GI+ +  V  G  + 
Sbjct: 60  ILWATLAFFVVALAWAAFAEVDEVTVGEGKVIPSSRVQVVQNLEGGIVSEIMVRVGQVVQ 119

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G PL+  +D   T      +     L   I    +  +                 ++L 
Sbjct: 120 KGQPLMRIDDTRFTSSYKEGQAKDAALLARIARLTAEANGAAF----------VAPDRLA 169

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                       +F      +  +L +   +         +  ++ + L+       K+L
Sbjct: 170 QTSPGLLDEERSLFESRQRELQSNLDVLRQQAEQHRQELAEKRSRQAQLQHSYGLVAKEL 229

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            +   L +K AVS  ++ + ER       +L         +     E   + +   A++ 
Sbjct: 230 ALTSPLVQKGAVSDVEVLRLERQANDMKGDLDATRLAMPRLEAAYREARQKIDETTAHFR 289

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            +  ++L Q +   +   +    LE    +  + +P+ G +   +  +     Q    L+
Sbjct: 290 ADAMKELNQARAEQSALSAANVALEDRVTRTLVRAPLKGMVKQIKINTVGGVIQPGMDLL 349

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-SQQD 378
           +IVP      I A+V P  I  +  G  ATV+   Y       F A++E I         
Sbjct: 350 EIVPLDDTLLIEARVRPSDIAFLHPGQDATVKLSAYDFSIYGGFPAVVEDISADTIVPDR 409

Query: 379 NNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              +   YY V+++      +     + +  G  A V       T+   ++ P+
Sbjct: 410 PGEKPDSYYRVLVRTRQNKPSGRSQPVAIVPGMIATVDIRTGRRTVLHYLLKPV 463


>gi|227113044|ref|ZP_03826700.1| protease secretion protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 432

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 66/437 (15%), Positives = 170/437 (38%), Gaps = 13/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +  +R+   +++   LL + G  G + W++  P++  V  +G ++   N   ++    
Sbjct: 1   MNQTARRDEKRAVRLGWLLVLAGFGGFLLWALFAPLDKGVMVNGSVVISGNRKVVQHNQG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLN 121
           GI+ K QV++G ++  G  LLT  +++       +D + + +      +  E+  L  + 
Sbjct: 61  GIVDKIQVKDGDRVEAGQILLTLNEVDARSASEGLDGQYLQLVAREGRLLAEQQRLSDMV 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               +   A +         +    +    +      S+    +   T +  +  +    
Sbjct: 121 MTPRLQPLAEKPE-------MHVITALQRDLLRSRQQSLKLEAEGMRTSIAGMEASLSAQ 173

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
               S  +    + ++ L  +++L  +N V +N + + ER++ +   ++ +   +     
Sbjct: 174 RQVMSSKQKQRETLEQQLQGLRSLAAENYVPRNKMLENERLLAQLNGDIAQLAGDINRTR 233

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R I +           Y KE++ +L   +   +D  SK    +       + +P++GT+V
Sbjct: 234 RDIEQQTLLIAQRQQEYDKEVNSELADVRALLSDVGSKKEKADFNLANIQMRAPVSGTVV 293

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F+        Q L++IVP  +  ++ A++  + +  V  G    ++F  +      
Sbjct: 294 GLKVFTEGGVIAPGQTLLEIVPDDQPVFVDARLPVELVDKVWPGLPVELQFVAFNQSTTP 353

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNT 420
           +    +E +       + +     YY + +++ +    +   +E++ G P +        
Sbjct: 354 RVAGTVELLSADRLLDERD--GSPYYSLRVQVDEAGKRALEGLEVKPGMPVQGFVRTGER 411

Query: 421 TLAQEIIHPITDNWPKI 437
           +    +  P+ D     
Sbjct: 412 SFVNYLFKPLMDRLHLA 428


>gi|42520498|ref|NP_966413.1| HlyD family secretion protein [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410237|gb|AAS14347.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 506

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 84/444 (18%), Positives = 161/444 (36%), Gaps = 31/444 (6%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + +L   GI G+  WS + PI+ +V +SGE++   N   ++    GII K  V+
Sbjct: 72  PLFFGLVVILIFFGIGGI--WSAIAPIDGAVHASGEVIVSSNRKIVQHLGGGIISKILVK 129

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKA 130
               + +  PL+   D+     + + K  +         +   +  LD L    +V + +
Sbjct: 130 ESQAVKKDEPLVLLSDVNEKANLSIIKEKLLSFLATEARLLAIRVDLDTLEFPDEVKKLS 189

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +       + + K      K+FN    S+     +   R++ +      L  + +    
Sbjct: 190 HD-------ELVNKAIKNQVKLFNSQRKSILGKTDILQQRIKQLNDELAGLNFQLNAAHK 242

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                 ++L   + L +   +S+  +   E+   +    +         + + I E   E
Sbjct: 243 QYDLITEELETKRQLLDSGHISKPHILALEKQFAEIEGRVGHYRSAISQVQQKIGENELE 302

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                 +  +  + +L++   + AD   +L + E +  +  I SP  G +   +  +   
Sbjct: 303 IINVRNDSQERANAELKEVSTSIADLKERLMVAEDSLARTIIKSPQDGIVTDIRYHTEGG 362

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPHY 355
             Q   P+M +VP      I AK+  + I+ V                +G    VR   Y
Sbjct: 363 VIQSGVPIMSVVPSDDDLIIDAKIQTRNIEEVLSAQKKDSNIVSIDGLEGLKVKVRLSAY 422

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVL 414
           +  R      I+  I P         +   YY V + I     +   N+ L  G PAEV 
Sbjct: 423 SARRLSLISGIVSHISPDALDD---PRLGRYYSVRVVIPKPELAQFKNVYLYPGMPAEVY 479

Query: 415 FTAKNTTLAQEIIHPITDNWPKIF 438
              ++ TL   +  PI     + F
Sbjct: 480 IVTQSRTLLSFLFTPIIATVDRSF 503


>gi|116249837|ref|YP_765675.1| hypothetical protein RL0071 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254485|emb|CAK05559.1| Hypothetical protein expD2 [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 449

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 77/438 (17%), Positives = 164/438 (37%), Gaps = 11/438 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + ++ R+          +      G   W+   P+  +V + G  +   N   I+    G
Sbjct: 17  YSDVPRSIRVHSIVGLTVLFTSFGGFGFWAATAPLASAVIAQGSFVATGNNKIIQHLEGG 76

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLNN 122
           IIK+ +V  G  + +G  LLT +   +      + L+++ ++ +   +  E   L     
Sbjct: 77  IIKEMRVSEGDTVKEGDILLTLDPTASRSNERMLQLRRLRLEAVVARLRAEAQGLRQFQL 136

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              V ++A +     ++        + + VF+     +   L +    + S+    +   
Sbjct: 137 PDIVTKEAGDPDINAII-------QSQNVVFHSKQIKLEEQLNLIGKNIASLEFRFVGYR 189

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +       LS   ++      L +   + + DL   ER +  +  ++     E      
Sbjct: 190 GQRESFERQLSLLTEERDSKARLVKVGYMRKTDLLAIERAIADAMGDIARLNGELNESEA 249

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I +   EA +   +  +     LE  +        ++       E+ TI SP++GT+V 
Sbjct: 250 EIAKFRQEAVIAVNSNKQAALDALETAETDLDSVREQMREAAGVLERTTIRSPVSGTVVR 309

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           +   ++       +P+M+I+P      + AKV    I  + +G TA++R           
Sbjct: 310 SYFHTAGGVITTGKPIMEILPSHVPLILEAKVLRTSIDQLHEGETASIRLTALNRRTTPV 369

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
            +  +  +     +++     ++ Y V + I D   +  +N     G PAEVL      T
Sbjct: 370 LQGKVFYVSADSIEENAGASVKDVYIVRVGIPDSEIARVHNFHPVPGMPAEVLIQTSERT 429

Query: 422 LAQEIIHPITDNWPKIFE 439
             + +  PITD+  + F+
Sbjct: 430 FFEYLSKPITDSMSRAFK 447


>gi|149911638|ref|ZP_01900249.1| HlyD family secretion protein [Moritella sp. PE36]
 gi|149805308|gb|EDM65322.1| HlyD family secretion protein [Moritella sp. PE36]
          Length = 455

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 168/439 (38%), Gaps = 11/439 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  L    P   +         ++  I W+    ++   +  G+++    +  I+
Sbjct: 10  MADDVYGALLTQSPRIHRLTIWALAAFVLSFIVWAYFAKLDRVATGMGKVVPSSQIQIIQ 69

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--- 117
           S   GI+++  V+ G+ + +  PL   +D      +  ++  + +LR  I   +S L   
Sbjct: 70  SLDGGILQELYVQEGALVTKNQPLARIDDTRFRADLAQQRQEVDSLRADIIRLRSELSSI 129

Query: 118 ---DFLNNKYDV-LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              D  N +  + + K   +  + L   L    +     +   + S+   + ++  +++ 
Sbjct: 130 LVADVPNWQLQIKITKTALTFPDDLQQNLPYLVTRQQDEYRARLDSLTNLVAIQGQQIQQ 189

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 +L++K   L        ++L + + L +K  +S+ +L + ER V     EL   
Sbjct: 190 RVEETKELKSKIKTLEVSYKLASRELALTRPLAKKYIISEVELLKLERSVNSIKGELNSI 249

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                 +   + E   +      NY  +    L + Q  F+         E    +  I+
Sbjct: 250 RLMVPKLQSVMAEAVLKRREAVLNYRADARAQLNELQSKFSRITEAKVGAEDKVNKALIV 309

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ GTI      +     Q  Q L++IVP      I AK+ PK I  +  G TA V+  
Sbjct: 310 SPVVGTIKTLHINTLGGVIQPGQALLEIVPTEDKLLIEAKIKPKDIAFIHLGLTAVVKIT 369

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAE 412
            Y   R    K ++E I    +Q ++      +Y + ++        N ++ +  G    
Sbjct: 370 AYDFTRYGGLKGVVEHISADTTQDED---GNSFYIIRVRTDISDIQGNHDMPIIPGMMTS 426

Query: 413 VLFTAKNTTLAQEIIHPIT 431
           V       T+ + I++P+ 
Sbjct: 427 VDVMIGKRTVLEYILNPVL 445


>gi|157165040|ref|YP_001466533.1| acriflavine resistance protein [Campylobacter concisus 13826]
 gi|112800690|gb|EAT98034.1| type I secretion membrane fusion protein, HlyD [Campylobacter
           concisus 13826]
          Length = 488

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 72/432 (16%), Positives = 156/432 (36%), Gaps = 20/432 (4%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           + + +    P++ K++     I +  L+ W+    I+     SG+I+       I++   
Sbjct: 62  LSEAVLAKAPSTSKKILYAVSITVFWLLLWASWAQIDEITRGSGKIIPSGKNQAIQNLEG 121

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLN 121
           GI+ +  V+ G ++ +   L+  ++   T      K+ +  L+     +D E +  +F  
Sbjct: 122 GIVDQIFVKEGDEVKKDQILIRLDNKNFTSSYGESKLRLDELQAKFMRLDAEANDKEFDY 181

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           N+      +   R E               + N  I  +   + +   ++        +L
Sbjct: 182 NETRDANNSKAVRYEI-------------SLHNSNIDHLNEQIGILTEQIHQRQSELTEL 228

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            NK S  +   +   K+  +M+ +F+K  VS+ +  Q +R V     EL  ++     + 
Sbjct: 229 RNKISQTQNSYNLVLKEKAIMEPIFKKGLVSEVEYIQLQRRVNDLKGELDASVLAVPRVE 288

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I E  ++       +     ++L +     A        L    E+  + SP+ G + 
Sbjct: 289 STIKEAKNKIEEAKLAFKNNAKKELNEVSAEIARINESQISLSDRVERTYVRSPVNGIVS 348

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                + S   +  + + +IVP         KV P  +  ++ G    V+F  Y      
Sbjct: 349 KMMVHTVSGVIKPGENIAEIVPLEDKLIAEVKVKPADVAFLRPGLDTMVKFTAYDFSIYG 408

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
             K  + +I      + N    + YY V ++     L   +  + ++ G           
Sbjct: 409 GLKGKVTQISADT--ETNEKTGESYYLVRIETEKNYLGSEEKPLRIKVGMIVSADIITGK 466

Query: 420 TTLAQEIIHPIT 431
            T+   ++ PI 
Sbjct: 467 KTILDYLLKPIL 478


>gi|170724842|ref|YP_001758868.1| HlyD family type I secretion membrane fusion protein [Shewanella
           woodyi ATCC 51908]
 gi|169810189|gb|ACA84773.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           woodyi ATCC 51908]
          Length = 460

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 167/448 (37%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P+S + +    +      + W+    ++   +  G+++    V  I+
Sbjct: 12  MIDDVYGAMMTDAPSSHRLIIWTLVALATCFLIWAFFAELDQVTTGMGKVIPSSQVQIIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSAL 117
           S   GI+++  V+ G  + +G  L+  +D         ++  + +L+     ++TE +++
Sbjct: 72  SLDGGIMQELYVQEGMIVTKGQALVRIDDTRFRSDFAQQEQEVYSLQANVKRLETELNSI 131

Query: 118 DFLNNKYDVLEKAFESR-----EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
              +   D  E+   ++       +L +   +        ++  + S+   L++   +++
Sbjct: 132 VITDMAADWREQVRITKLPLQFSAELAELEPELIERQKDEYSGRLDSLSNQLEILARQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +L +K   L        ++L++ + L +K  V + +L + ER V     EL  
Sbjct: 192 QRQQETQELASKIRTLTKSYQLVSRELSLTRPLADKGIVPEVELLKLERTVNDIQGELAT 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +    +E   +       +  E    L   Q   +         +    +  I
Sbjct: 252 LRLLRPKVKASQDEAILKRREAVFAFSTETRTQLSDLQTKLSRMSEAQVGAQDKVNKAEI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GTI      +     Q    +++IVP      I  K+TPK I  +  G  A V+ 
Sbjct: 312 VSPVNGTIKSIYINTLGGVVQPGIDILEIVPSEDQLLIETKITPKDIAFLHPGLPAVVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R       +E I    SQ +       +Y V ++    + + ++   + +  G 
Sbjct: 372 TAYDFTRYGGLNGTVEHISADTSQDEE---GNSFYLVKVRTELSSLTRDDGTEMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTSVDVITGQRSILEYILNPILRAKDTA 456


>gi|58699106|ref|ZP_00373938.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58534377|gb|EAL58544.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 506

 Score =  323 bits (829), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 87/445 (19%), Positives = 167/445 (37%), Gaps = 33/445 (7%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + +L   GI G+  WS + PI+ +V +SGE++   N   ++    GII K  V+
Sbjct: 72  PLFFGLVVILIFFGIGGI--WSAIAPIDGAVHASGEVIVSSNRKIVQHLGGGIISKILVK 129

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
               + +  PL+   D+     + + K  + +        ++ L  +    D LE + E 
Sbjct: 130 ESQAVKKDEPLVLLSDVNEKANLSIIKEKLLSFLA----TEARLLAIRVDLDTLEFSDEV 185

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           ++    + + K      K+FN    S+     +   R++ +      L  + +       
Sbjct: 186 KKLSNDELVNKVIKNQVKLFNSQRKSILGKTDILQQRIKQLNDELAGLNFQLNAAHKQYD 245

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++L   + L +   +S+  +   E+       E+   +   ++ +  + +   E  L
Sbjct: 246 LITEELETKRQLLDSGHISKPHILALEKQF----AEIEGRVGHYRSAISQVQQKIGENEL 301

Query: 254 EFANYLKE----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E  N   +     + +L++   + AD   +L + E +  +  I SP  G +   +  +  
Sbjct: 302 EIINVKNDSQERANAELKEVSTSIADLKERLMVAEDSLARTIIKSPQDGIVTDIRYHTEG 361

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPH 354
              Q   P+M +VP      I AK+  + I+ V                +G    VR   
Sbjct: 362 GVIQSGVPIMSVVPSDDDLIIDAKIQTRNIEEVLSAQKKDSNIVSIDGLEGLKVKVRLSA 421

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEV 413
           Y+  R      I+  I P         +   YY V + I     +   N+ L  G PAEV
Sbjct: 422 YSARRLSLISGIVSHISPDALDD---PRLGRYYSVRVVIPKSELAQFKNVYLYPGMPAEV 478

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIF 438
               ++ TL   +  PI     + F
Sbjct: 479 YIVTQSRTLLSFLFTPIIATVDRSF 503


>gi|148545442|ref|YP_001265544.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida F1]
 gi|148509500|gb|ABQ76360.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida F1]
          Length = 458

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 71/427 (16%), Positives = 156/427 (36%), Gaps = 14/427 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L  + P  ++      I+  + LI W+ + PI+      G+ +    V +I++   GI
Sbjct: 34  KALIEDAPRVVRLTIWGVILFFVFLIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGI 93

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +   + G  +  G PLL  ++      +   +     +   +  E+ + +  ++   +
Sbjct: 94  VAEIFAKEGQIVEVGQPLLRLDETRFASNVGETEADRLAMALRV--ERLSAEVQDSPLII 151

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            EK  ++   Q         ++   ++      +   +     ++        +  +K +
Sbjct: 152 DEKLRKAAPNQA--------ASEESLYQSRRQQLQDEIGGLQQQLVQRQQELREYSSKRT 203

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L   +K+++M + L    A+SQ ++ +  R   ++  +L             I E
Sbjct: 204 QYANSLELLRKEISMSEPLVATGAISQVEVLRLRRAEVENRGQLDSTALAIPRAEAAIRE 263

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  +       +  E    L + +       +    L+    +  + SP+ G +      
Sbjct: 264 VQSKIEETRGKFRSEALTQLNEARTELNKATATSKALDDRVHRTLVTSPVRGIVKQLLVN 323

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    ++++VP      I AK+ PK I  +  G  ATV+F  Y        KA 
Sbjct: 324 TIGGVIQPGSDIIEVVPLDDTLVIEAKILPKDIAFLHPGQEATVKFTAYDYTIYGGLKAK 383

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I       ++   T  YY + L+     L   +  + +  G  A V       T+  
Sbjct: 384 LEQIGADTITDEDKKTT--YYLIKLRTDRSHLGTDEKPLLIIPGMVATVDIMTGKKTIMS 441

Query: 425 EIIHPIT 431
            ++ PI 
Sbjct: 442 YLLKPIM 448


>gi|241207007|ref|YP_002978103.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240860897|gb|ACS58564.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 449

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 76/438 (17%), Positives = 166/438 (37%), Gaps = 11/438 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + ++ R+          +      G   W+   P+  +V + G  +   N   ++    G
Sbjct: 17  YSDVPRSIRMHSIVGLTVLFTSFGGFGFWAATAPLASAVIAQGSFVATGNNKIVQHLEGG 76

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLNN 122
           IIK+ +V  G  + +G  LLT +   +      + L+++ ++ +   +  E   L  L  
Sbjct: 77  IIKEMRVSEGDTVKEGDILLTLDPTASRSNERMLQLRRLRLEAIVARLRAEAQGLRELQL 136

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              V ++A ++    ++        + + VF+     +   L +    + S+        
Sbjct: 137 PNIVTKEASDTDINAII-------QSQNVVFHSKQIKLEEQLNLIGKNIASLEFRFAGYR 189

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +       LS   ++      L +   + + DL   ER +  +  ++     E      
Sbjct: 190 GQRDSFERQLSLLTEERDSKARLVKVGYMRRTDLLAIERAIADAMGDIARLNGELNESEA 249

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I +   EA +   +  +     LE  +        ++       E+ TI SP++GT+V 
Sbjct: 250 EIAKFRQEAVIAVNSNKQAALDALETAETDLDSVREQMREAAGVLERTTIRSPVSGTVVR 309

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           +   ++       +P+M+I+P      + A+V    I  + +G TA++R           
Sbjct: 310 SYFHTAGGVITTGKPIMEILPSHVPLILEAQVLRTSIDQLHEGETASIRLTALNRRTTPV 369

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
            +  +  +     ++++    ++ Y V + I D   +  +N     G PAEVL      T
Sbjct: 370 LQGKVFYVSADSIEENSGASVKDVYIVRVGIPDSEIARVHNFHPVPGMPAEVLIQTSERT 429

Query: 422 LAQEIIHPITDNWPKIFE 439
             + +  PITD+  + F+
Sbjct: 430 FFEYLSKPITDSMSRAFK 447


>gi|262275321|ref|ZP_06053131.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Grimontia hollisae CIP 101886]
 gi|262220566|gb|EEY71881.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Grimontia hollisae CIP 101886]
          Length = 466

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 69/446 (15%), Positives = 154/446 (34%), Gaps = 14/446 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                 L  + P S + +  +  + II    W+    ++      G+++    +  +++ 
Sbjct: 21  DDKTAALLLSTPKSTRILLWVIALFIIVTAVWAAFAELDKVTVGQGKVIPSSQLQVVQNL 80

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G+IKK  V  G  + +G  LL  +D         +   + +L+      +S ++ +  
Sbjct: 81  EGGLIKKLLVHEGDTVEEGQQLLLIDDTMFRSDFRERVQELTSLQGDAVKLQSLVESVVV 140

Query: 123 KYDV----------LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +           +++       +  +      +     +   ++++   L +   ++R
Sbjct: 141 NPETGVENWQEAVTIQRNELVFTPEFQEEHRAVVARQRAEYRDKLNNLQNQLSVTAQQIR 200

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                 +++E +   LR       ++ ++ K L ++  V Q DL + +R V  +  EL  
Sbjct: 201 QKEQELIEVEARVQNLRQSYRFAHEEYSITKPLADEGVVPQIDLLKLQRQVNDTQRELSS 260

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                 ++   + E   +       +  E    L   +            L    E+  +
Sbjct: 261 AELSLPSITSSLQEAVFKHIDVALKFRAEQQERLSDVEDKLLAMTETRVTLADRVERTVV 320

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GTI      +     Q    L++IVP      I AK+ P+ I  ++ G  A V+F
Sbjct: 321 VSPVNGTIKKLHVNTVGGVIQPGMDLVEIVPSEDNLLIEAKIAPQDIAFLRPGLEAIVKF 380

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPA 411
             Y          I+E I     Q +       +Y V ++       +   + +  G  A
Sbjct: 381 SAYDFTVYGGLTGILETISADTIQDEE---GNSFYLVKIRTESNNLGEGEELPIIPGMTA 437

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKI 437
                    ++   ++ PI       
Sbjct: 438 STDIITGKRSVLDYLLKPILQAQKSA 463


>gi|71736906|ref|YP_275247.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71557459|gb|AAZ36670.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 428

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 67/425 (15%), Positives = 147/425 (34%), Gaps = 9/425 (2%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++   +L + G      W+ L P++  ++  G ++       ++S   G++ K  V  G 
Sbjct: 5   VRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQ 64

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            + +G PL   +  +    +   +   +          +E+  LD ++   +++      
Sbjct: 65  SVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLDEVHFPAELIAAG--- 121

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           + +     L        ++F+    ++ R        +    L    +    S L A   
Sbjct: 122 QGQNPDPRLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQAD 181

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           S +K L+ ++ L +   +  N L + +  + +    L +N  E   + + I E       
Sbjct: 182 SLRKQLSNLEPLAQNGFIPGNRLLEFQSQLSQVQQSLAQNAGETGRIEQGIVESRLRLQQ 241

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +   Y KE+       Q        +L     + +   IL+P  G  V     +     +
Sbjct: 242 QREEYQKEVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNLGVHTEGAVVR 301

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             + L++IVP      +  ++  + I  V       + F  +   R  +    +  I   
Sbjct: 302 AGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVSGEVNLISAD 361

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
             Q +     Q YY +   + D      N + ++ G PAE+       +L   +  P+ D
Sbjct: 362 QMQDEKT--GQPYYVLRTSVGDAVLEKLNGLVIKPGMPAEMFVRTGERSLLNYLFKPLLD 419

Query: 433 NWPKI 437
                
Sbjct: 420 RAGSA 424


>gi|312958412|ref|ZP_07772933.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
 gi|311287476|gb|EFQ66036.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
          Length = 457

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 64/433 (14%), Positives = 153/433 (35%), Gaps = 14/433 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L  + P  ++      I   + L+ W+    I+      G+ +    + +I++   GI
Sbjct: 33  KALIDDAPRIVRLTIWGVIGFFVFLLLWAHFAIIDEVTKGDGKAIPSSRIQKIQNLEGGI 92

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V  G  +  G PL+  +D      +   +     +   ++   + ++  N   ++
Sbjct: 93  VAQIYVHEGQIVEAGAPLVRLDDTRFASNVGETEADRVAMELRVERLSAEIE--NRPLNI 150

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E A ++   Q         S    ++      +   +     ++        +  +K  
Sbjct: 151 TEDARKAVPNQA--------SNEESLYLSRRQQLADEIGGLQQQLLQRQQESREFSSKQE 202

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             R  L+  ++++ M + L ++ A+S  ++ + +R   ++   L             INE
Sbjct: 203 QYRNSLNLLRQEIGMSEPLVKQGAISPVEVLRLKRSEVETRGMLDGTTLAIPRAQAAINE 262

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  + +     +  E    L + +   +   +    LE    +  + SP+ G +      
Sbjct: 263 VQRKIDETRGKFRSEALAQLNEARTNLSKAQATSKGLEDRVSRTMVTSPVRGIVKQMLVN 322

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    + ++VP      + AK+ P+ I  +  G  A ++F  Y        K  
Sbjct: 323 TVGGVIQPGSDMAEVVPLDDTLLVEAKIRPQDIAFLHPGQEAMIKFTAYDYTIYGGLKGK 382

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E I       +    T  +Y + L+     L   +  + +  G  A V       ++  
Sbjct: 383 LETIGADTVMDEEKKNT--FYIIKLRTDRSHLGTDEKPLLIIPGMVASVDIITGKKSILS 440

Query: 425 EIIHPITDNWPKI 437
            ++ PI  +  + 
Sbjct: 441 YLLKPIIKSRAEA 453


>gi|91775699|ref|YP_545455.1| Type I secretion membrane fusion protein, HlyD [Methylobacillus
           flagellatus KT]
 gi|91709686|gb|ABE49614.1| Type I secretion membrane fusion protein, HlyD [Methylobacillus
           flagellatus KT]
          Length = 462

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 70/431 (16%), Positives = 161/431 (37%), Gaps = 13/431 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            + +   ++ ++G  G + W+ L P++  V + G +  E     ++    GII +  V  
Sbjct: 37  RTTRLGFIILLLGFGGFLAWAALAPLDEGVPTEGLVTVEGRHKTVQHLNGGIISQLMVHE 96

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAF 131
           G  +  G  L T +   +    D  +     L      +  EK     +    +++++  
Sbjct: 97  GQAVQAGDVLFTLDATASKARFDEVRQRYLGLLAQESRLLAEKLGAGSIVFHEELIKQQG 156

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +   +QL+    +      +     + ++  S++ +   +          +  +   ++ 
Sbjct: 157 DPYVQQLMLNQSQLLRARQEALRADVEAMRESIQGQQALIE-------GYQGVAGSYQSQ 209

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L    + L  ++ L  +    +N  N+ E+ + ++   +  N        + I EL    
Sbjct: 210 LELLTQQLAGIRQLVSEGFAPRNQQNELEQKLAQTYGLIATNDSNILRSRKAILELQQRI 269

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                   KEI  ++ Q +     +  K   L    ++ T+ +P++G +V  Q  +    
Sbjct: 270 TAREQTEKKEIDTEMAQVKLAVQADAEKYKPLWDELQRITVTAPVSGQVVGLQVHTVGAV 329

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  Q +M IVP  +   + A++ P  I  +  G  A VRF  +++  +   +  ++ + 
Sbjct: 330 IQPGQKIMDIVPFDEPLILDARIPPHLIDKIHTGQDADVRFSSFSNTPQLLLEGQVKTVS 389

Query: 372 PI--ISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
               +           YY   + IT+       +  L+ G P +V+      TL   ++H
Sbjct: 390 SDLLVDPGTGGQAPSSYYLARINITEDGMKTLGDRRLQPGMPVQVVIRTGERTLLTYLMH 449

Query: 429 PITDNWPKIFE 439
           P+        +
Sbjct: 450 PLVKRIAASMK 460


>gi|157960195|ref|YP_001500229.1| HlyD family type I secretion membrane fusion protein [Shewanella
           pealeana ATCC 700345]
 gi|157845195|gb|ABV85694.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           pealeana ATCC 700345]
          Length = 460

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 69/448 (15%), Positives = 165/448 (36%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P S + +        +  + W+    ++   +  G+++    V  I+
Sbjct: 12  MVDDVYGAMMTDAPTSHRLIIWALAALAVTFLVWAYFAELDQVTTGMGKVIPSSQVQVIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSAL 117
           S   GI+++  V+ G  + +G PL+  +          ++  + +L      +  E +++
Sbjct: 72  SLDGGILQEMYVQEGLIVTKGQPLVRIDATRFQSDFAQQEQEVNSLVANVVRLQAELNSI 131

Query: 118 DFLNNKYDVLEKAFESRE-----EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  D  E+   S +       L +   K  +   + +   + ++   L+++  +++
Sbjct: 132 TISGITNDWREQVKISPQPLIFPAALEEGDPKLTNRQREEYTGRLDNLSNQLEIQARQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +L +K   L        ++L + + L EK  V + +L + +R+V     EL  
Sbjct: 192 QRNQEIQELASKIRTLTTSFQLVSRELELTRPLAEKGIVPEVELLKLQRVVNDIQGELAS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +   ++E   +       Y  +    L + Q   +         +    +  I
Sbjct: 252 LRLLRPKVKSTMDEAILKRRESVLIYAADSRAQLNEMQTKLSRMNEAQVGAQDKVSKAEI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GT+      +     Q    +++IVP      I  K+ PK I  +  G  A V+ 
Sbjct: 312 VSPVNGTVKTIHINTLGGVVQPGVDIIEIVPSEDKLLIETKIIPKDIAFLHPGLPAVVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R      ++E I    +Q +       +Y V ++    + + ++   + +  G 
Sbjct: 372 TAYDFTRYGGLNGVVEHISADTTQDEE---GNSFYIVKVRTEFSSLTKDDGTQMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTSVDVITGQRSVLEYILNPILRAKDTA 456


>gi|325294076|ref|YP_004279940.1| Proteases secretion protein prtE [Agrobacterium sp. H13-3]
 gi|325061929|gb|ADY65620.1| Proteases secretion protein prtE [Agrobacterium sp. H13-3]
          Length = 437

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 164/433 (37%), Gaps = 13/433 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K +       + +L+   + GL  W+ L  +  +V ++G ++ E N  +I+    GI+ +
Sbjct: 11  KTSIVKHSTAVVVLAAGLLFGLGGWAALAKLSGAVVATGRVVVEGNSKKIQHLSGGIVSQ 70

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV 126
             V  G  +  G  LL          + + + ++  L   R  +  E S         D+
Sbjct: 71  INVAEGDTVEAGQVLLRLSGTIVQANLSIVENTLAQLYARRARLRAEISDATSFTTPEDL 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                    +  +D       +   +FN   S++    K  +TR   +      ++ +  
Sbjct: 131 AVLTNSKAAKTFID-------SEQNLFNSRRSALIGMKKQLVTRKDQLADEARGMDVQIE 183

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L+  ++D++  + L+ K  V+   LN  +R +     +  + +  +   +  ++E
Sbjct: 184 ATNNELAIVREDVSKTRELYAKGLVTLQRLNLLKRQLSNLEGQQGQYMAARAQTVGKLSE 243

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  ++     +   E+++DL   + T A+   +L       ++  I SPIAG I      
Sbjct: 244 MDLQSLQLDEDRKSEVTKDLTSIEATVAEYEERLAATRDQLDRLDIRSPIAGRIYQLSVH 303

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           + +   Q  + LM +VP  +   I A V P  I  +  G    +RF  +         A 
Sbjct: 304 NINGVIQPGEVLMLVVPAKEDLAIDANVLPNDIDQIYVGQPVIIRFTAFNQSTTPDVSAE 363

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  + P +  Q ++     +Y + +K +           L  G PAEV       ++   
Sbjct: 364 VAVVAPDL--QTDSRSGASFYALRIKPSKTGMDHIPGGRLYPGMPAEVFIQTSERSVLSY 421

Query: 426 IIHPITDNWPKIF 438
            + P  D   K F
Sbjct: 422 FVKPFQDRLRKTF 434


>gi|325276531|ref|ZP_08142284.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           sp. TJI-51]
 gi|324098339|gb|EGB96432.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           sp. TJI-51]
          Length = 458

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 71/427 (16%), Positives = 155/427 (36%), Gaps = 14/427 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L  + P  ++      I+  + LI W+ + PI+      G+ +    V +I++   GI
Sbjct: 34  KALIEDAPRVVRLTIWGVILFFVFLIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGI 93

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +   + G  +  G PLL  ++      +   +     L   +  E+ + +  ++   +
Sbjct: 94  VAEIFAKEGQIVEVGQPLLRLDETRFASNVGETEAD--RLAMALRVERLSAEVQDSPLKI 151

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E   ++   Q         ++   ++      +   +     ++        +  +K +
Sbjct: 152 DEALRKAAPSQA--------ASEESLYQSRRQQLQDEIGGLQQQLVQRQQELREYSSKRA 203

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L   +K+++M + L    A+SQ ++ +  R   ++  +L             I E
Sbjct: 204 QYANSLELLRKEISMSEPLVATGAISQVEVLRLRRAEVENRGQLDSTALAIPRAEAAIRE 263

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  +       +  E    L + +       +    L+    +  + SP+ G +      
Sbjct: 264 VQSKIEETRGKFRSEALTQLNEARTELNKATATSKALDDRVNRTLVTSPVRGIVKQLLVN 323

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    ++++VP      I AK+ PK I  +  G  ATV+F  Y        KA 
Sbjct: 324 TIGGVIQPGSDIIEVVPLDDTLVIEAKILPKDIAFLHPGQEATVKFTAYDYTIYGGLKAK 383

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I       ++   T  YY + L+     L   +  + +  G  A V       T+  
Sbjct: 384 LEQIGADTITDEDKKTT--YYLIKLRTDRSHLGTDEKPLLIIPGMVATVDIMTGKKTIMS 441

Query: 425 EIIHPIT 431
            ++ PI 
Sbjct: 442 YLLKPIM 448


>gi|330806884|ref|YP_004351346.1| HylD like membrane fusion protein component of ABC transporter
           required for LapA secretion [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327374992|gb|AEA66342.1| HylD like membrane fusion protein component of ABC transporter
           required for LapA secretion [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 455

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 68/426 (15%), Positives = 157/426 (36%), Gaps = 14/426 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L  + P  ++      I   + L+ W+    I+      G+ +    + +I++   GI
Sbjct: 31  KALIEDAPRVVRLTIWGIIGFFVFLMLWANFAEIDEVTKGDGKAIPSSKIQKIQNLEGGI 90

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF--LNNKY 124
           + +  V+ G  +  G  L+  +D      +   +    ++   ++   + +D   LN   
Sbjct: 91  VAELFVKEGQIVDAGASLIRLDDTRFVSNVGETEADRLSMLLRVERLSAEVDDRPLNFPA 150

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DVL+             +    ++   ++      ++  +     ++        +  +K
Sbjct: 151 DVLKA------------VPGQAASEESLYLSRRQQLHDEIGGLQEQLIQRQQELREFVSK 198

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  R+ L+  ++++ M + L  + AVS  ++ + +R   ++  +L             I
Sbjct: 199 QAQYRSGLALQRQEINMSEPLVAQGAVSPVEVLRLKRAEVETRGQLDATTLAIPRAESAI 258

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E+  + +     +  E    L + +       +    LE    +  + SP+ G +    
Sbjct: 259 KEVQRKIDETRGKFRSEALTQLNEARTDLNKAQATGKALEDRVSRTLVTSPVRGIVNKLL 318

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +     Q    L++IVP      + AK+ P+ I  +  G  ATV+F  Y        K
Sbjct: 319 VNTIGGVIQPGSDLVEIVPLDDTILVEAKIRPQDIAFLHPGQDATVKFTAYDYTIYGGMK 378

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           A +E+I       ++   T    ++  + + L   +  + +  G  A V       T+  
Sbjct: 379 AKLEQIGADTITDEDKKTTYYVIKLRTERSHLGTDEKPLLIIPGMVASVDIITGKKTVLS 438

Query: 425 EIIHPI 430
            ++ PI
Sbjct: 439 YLLKPI 444


>gi|109898973|ref|YP_662228.1| HlyD family type I secretion membrane fusion protein
           [Pseudoalteromonas atlantica T6c]
 gi|109701254|gb|ABG41174.1| type I secretion membrane fusion protein, HlyD family
           [Pseudoalteromonas atlantica T6c]
          Length = 473

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 70/426 (16%), Positives = 154/426 (36%), Gaps = 15/426 (3%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W+ L++N P   + +    +  +  L+ WS    +       G+++  + +  ++S   G
Sbjct: 53  WEQLQQN-PLKARMLLYFIVFALTALLIWSAYATLNEVTRGDGKVVPTNQLQIVQSYDGG 111

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I+K+     G  +  G  LL  +       +   +    +L   +   K+          
Sbjct: 112 IVKEILTREGQTVNAGDVLLKLDPTRFISSLRENRSQFLSLSAKLARLKA---------- 161

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + EK        L+    +  S+    +   +  + + + M   + R       + ++  
Sbjct: 162 LTEKTPPIFSANLVKQAPEIVSSERNQYAANVEELAQHISMYQQQTRQREHELQEAQSAK 221

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                      ++L + + L +  A+S  D+ + ER + +   E++ N    +     I 
Sbjct: 222 EQYVRTKDLIHRELAVTRPLLKSGAISDIDIIRLERQLVEIEGEIKRNESVMRRNESAIQ 281

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   +   +    +     +L              + L     Q  + SP+ GTI    +
Sbjct: 282 EAKSKIREKELTTINGWRDELSDVSIELNSLRETESGLADVVYQADLKSPVKGTIKRLFT 341

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +          +++I+P      + AK+ PK I  ++ G TA V+F  Y  +     +A
Sbjct: 342 NTIGGVVPPGSDVIEIIPLDDQLIVEAKIKPKDIAFLRPGQTAMVKFTAYDFVIYGGLEA 401

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            +  I       +N+   + YY V L+    +F  N +++  G   +V       T+   
Sbjct: 402 EVTHISADTITDEND---ETYYVVRLQTGSNSF-KNGMQIIPGMTTQVDIITGKKTVLDY 457

Query: 426 IIHPIT 431
           I+ P+ 
Sbjct: 458 ILKPLL 463


>gi|26986910|ref|NP_742335.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida KT2440]
 gi|24981517|gb|AAN65799.1|AE016207_6 HlyD family secretion protein [Pseudomonas putida KT2440]
 gi|313496538|gb|ADR57904.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida BIRD-1]
          Length = 458

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 71/427 (16%), Positives = 155/427 (36%), Gaps = 14/427 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L  + P  ++      I+  + LI W+ + PI+      G+ +    V +I++   GI
Sbjct: 34  KALIEDAPRVVRLTIWGVILFFVFLIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGI 93

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +   + G  +  G PLL  ++      +   +     +   +  E+ + +  +    +
Sbjct: 94  VAEIFAKEGQIVEVGQPLLRLDETRFASNVGETEADRLAMALRV--ERLSAEVEDRPLII 151

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            EK  ++   Q         ++   ++      +   +     ++        +  +K +
Sbjct: 152 DEKLRKAAPNQA--------ASEESLYQSRRQQLQDEIGGLQQQLVQRQQELREYSSKRT 203

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L   +K+++M + L    A+SQ ++ +  R   ++  +L             I E
Sbjct: 204 QYANSLELLRKEISMSEPLVATGAISQVEVLRLRRAEVENRGQLDSTALAIPRAEAAIRE 263

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  +       +  E    L + +       +    L+    +  + SP+ G +      
Sbjct: 264 VQSKIEETRGKFRSEALTQLNEARTELNKATATSKALDDRVHRTLVTSPVRGIVKQLLVN 323

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    ++++VP      I AK+ PK I  +  G  ATV+F  Y        KA 
Sbjct: 324 TIGGVIQPGSDIIEVVPLDDTLVIEAKILPKDIAFLHPGQEATVKFTAYDYTIYGGLKAK 383

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I       ++   T  YY + L+     L   +  + +  G  A V       T+  
Sbjct: 384 LEQIGADTITDEDKKTT--YYLIKLRTDRSHLGTDEKPLLIIPGMVATVDIMTGKKTIMS 441

Query: 425 EIIHPIT 431
            ++ PI 
Sbjct: 442 YLLKPIM 448


>gi|78777902|ref|YP_394217.1| Type I secretion membrane fusion protein, HlyD [Sulfurimonas
           denitrificans DSM 1251]
 gi|78498442|gb|ABB44982.1| Type I secretion membrane fusion protein, HlyD [Sulfurimonas
           denitrificans DSM 1251]
          Length = 431

 Score =  322 bits (825), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 69/428 (16%), Positives = 166/428 (38%), Gaps = 22/428 (5%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++    +  +  + +  W    P+  S  + G++  + +   I+    G I+K  V++G 
Sbjct: 17  IRFGLAIIFVMFVLMGGWMAYAPLASSAVAVGKVSADLDKKTIQHLEGGKIEKIYVKDGD 76

Query: 77  QILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           ++ +   LL   D++    +++   +      L   +  ++     +    +  ++    
Sbjct: 77  RVKKDQILLKLSDVQIKAQLNILNSQYQDALALFARLKAQRDGDKVIEFLPESTDENIIK 136

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            +  + +   +     + + N  I+ +   +    + ++S    R              +
Sbjct: 137 NQRNIFETTKRKIEDENIITNNRITQLQNQIDGLNSLIKSKENRR--------------A 182

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           S  +++   ++L+++  V +  +   +R       +L     +   +   I+EL  +  L
Sbjct: 183 SISEEILEWESLYKQRLVDKQRIRDLQRENNMIEGDLASTKSDIAKINEQISELQTQQLL 242

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               + KE      + +   AD  SK+T  E T E+  I++PI G +V  +  +      
Sbjct: 243 REKEFQKETLERYVEAKSHIADLKSKITATEDTLERTAIVAPIDGIVVGFEIHTEGGVVS 302

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            ++P+++IVP      + A+V    I  V+ G  A +RF  +   +    +  +  +   
Sbjct: 303 PAKPILEIVPQDSKLIVVAQVQITDIDKVQVGLIADIRFSAFDLRQSHVVEGKVVHVSAD 362

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                +     +YY   +++T        DN+  L +G PAEV+      T    ++ P 
Sbjct: 363 SFINQDGKT--QYYSAKIEVTKEGVKSLQDNHFVLVSGMPAEVMIKTGERTALSYLLKPF 420

Query: 431 TDNWPKIF 438
            D + + F
Sbjct: 421 MDMFSRSF 428


>gi|104780727|ref|YP_607225.1| alkaline protease (AprA) secretion protein AprE [Pseudomonas
           entomophila L48]
 gi|95109714|emb|CAK14415.1| alkaline protease (aprA) secretion protein aprE [Pseudomonas
           entomophila L48]
          Length = 430

 Score =  321 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 72/432 (16%), Positives = 163/432 (37%), Gaps = 14/432 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R+    ++   +L+++G  G + W+ L P++  V   G ++       ++S   G++ +
Sbjct: 5   ERDARFHVRLGWVLTLVGFGGFMAWASLAPLDQGVPVQGTVVVSGKRKAVQSMAGGVVSR 64

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFLNNKYDV 126
             V  G Q+ QG PL   +  +    +D  +   +  R  +     E+  L  +    D+
Sbjct: 65  ILVSEGQQVRQGEPLFRLDRTQVQADVDALQAQYRMTRASLARWQSERDNLAQVQFPTDL 124

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +E A +++   +L+   +   +  +       ++  S+     ++  +   R DL+ ++ 
Sbjct: 125 VEDA-DAKLGLILEGQRQLFDSRRQAQAREQGALSASIDGSQAQLAGMRRARSDLQAQAD 183

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LR       + L  ++ L     + +N + + +R + +   +L +N  E   + + I E
Sbjct: 184 SLR-------EQLDNLRPLAGDGYIPRNRVLEYQRQLSQVQRDLAQNAGESARLEQVIVE 236

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                      Y KE+   L + Q   A    +L       +   I +P  G  V     
Sbjct: 237 SRLNLQQRREEYQKEVRTQLAEAQVKAATLEQQLNSARFELQHSEIQAPADGIAVNLGVH 296

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +    L++IVP      +  ++    +  V       + F  +   R  +    
Sbjct: 297 TEGAVVRPGDTLLEIVPQGTALEVEGRLPVNLVDKVAPQLPVDILFTAFNQNRTPRVTGE 356

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  +     Q  +    Q YY +   +++ A +    + +R G PAE+       +L   
Sbjct: 357 VALVSAD--QLIDERSGQPYYVLRSTVSEEALARLQGLAIRPGMPAELFVRTGERSLLNY 414

Query: 426 IIHPITDNWPKI 437
           +  P+ D     
Sbjct: 415 LFKPLLDRAGTA 426


>gi|172065352|ref|YP_001816064.1| HlyD family type I secretion membrane fusion protein [Burkholderia
           ambifaria MC40-6]
 gi|171997594|gb|ACB68511.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria MC40-6]
          Length = 474

 Score =  321 bits (824), Expect = 9e-86,   Method: Composition-based stats.
 Identities = 65/414 (15%), Positives = 139/414 (33%), Gaps = 13/414 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +   ++  I+  + W+    ++      G+++    V  +++   GI+ +  V  G  + 
Sbjct: 60  ILWATLAFIVIALLWAAFAEVDEVTVGEGKVIPSSRVQVVQNLEGGIVSEIMVRVGQVVQ 119

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G PL+  +D   T      +     L   I    +  +                   L 
Sbjct: 120 KGQPLMRIDDTRFTSSYKEGQAKDAALLARIARLSAEANGAAF----------VVPAALA 169

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                       +F      +  +L +   +         +  ++   L+   +   K+L
Sbjct: 170 RANPGLLDEERSLFESRQRELQANLDVLRQQAEQHRQELAEKRSREGQLQHSYALVAKEL 229

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            +   L EK AVS  ++ + ER       +L         +     E   + +   A++ 
Sbjct: 230 ALTSPLVEKGAVSDVEVLRLERQATDMKGDLDATRLAMPRLEAAYREARQKIDETTAHFR 289

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            +  ++L   +   +   +    LE    +  + +P+ G I   +  +     Q    L+
Sbjct: 290 ADAMKELNLARADQSALSAANVALEDRVTRTLVRAPLKGMIKQIKINTVGGVIQPGMDLL 349

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-SQQD 378
           +IVP      I A+V P  I  +  G  ATV+   Y       F A++E I         
Sbjct: 350 EIVPLDDTLLIEARVRPADIAFLHPGQDATVKLSAYDFSIYGGFPAVVEDISADTIVPDR 409

Query: 379 NNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              +   YY V+++      +     + +  G  A V       T+   ++ P+
Sbjct: 410 PGEKPDSYYRVLVRTRQNKPSGRSQPVAIVPGMIATVDIRTGRRTVLHYLLKPV 463


>gi|170701736|ref|ZP_02892673.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria IOP40-10]
 gi|170133347|gb|EDT01738.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria IOP40-10]
          Length = 474

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 65/414 (15%), Positives = 140/414 (33%), Gaps = 13/414 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +   ++  I+  + W+    ++      G+++    V  +++   GI+ +  V  G  + 
Sbjct: 60  ILWATLAFIVVALLWAAFAEVDEVTVGEGKVIPSSRVQVVQNLEGGIVSEIMVRVGQVVQ 119

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G PL+  +D   T      +     L   I    +  +                   L 
Sbjct: 120 KGQPLMRIDDTRFTSSYKEGQAKDAALLARIARLSAEANGAAF----------VVPAALA 169

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                       +F      +  +L +   +         +  ++   L+   +   K+L
Sbjct: 170 RANPGLLDEERSLFESRQRELQANLDVLRQQAEQHRQELAEKRSREGQLQHSYALVAKEL 229

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            +   L EK AVS  ++ + ER       +L         +     E   + +   A++ 
Sbjct: 230 ALTSPLVEKGAVSDVEVLRLERQATDMKGDLDATRLAMPRLEAAYREARQKIDETTAHFR 289

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            +  ++L   +   +   +    LE    +  + +P+ G I   +  +     Q    L+
Sbjct: 290 ADAMKELNLARADQSALSAANVALEDRVTRTLVRAPLKGMIKQIKINTVGGVIQPGMDLL 349

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-SQQD 378
           +IVP      I A+V P  I  +  G  ATV+   Y       F A++E I         
Sbjct: 350 EIVPLDDTLLIEARVRPADIAFLHPGQDATVKLSAYDFSIYGGFPAVVEDISADTIVPDR 409

Query: 379 NNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              +   YY V+++   +  +     + +  G  A V       T+   ++ P+
Sbjct: 410 PGEKPDSYYRVLVRTRQSKPSGRSQPVAIVPGMIATVDIRTGRRTVLHYLLKPV 463


>gi|119384769|ref|YP_915825.1| HlyD family type I secretion membrane fusion protein [Paracoccus
           denitrificans PD1222]
 gi|119374536|gb|ABL70129.1| type I secretion membrane fusion protein, HlyD family [Paracoccus
           denitrificans PD1222]
          Length = 477

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 65/437 (14%), Positives = 161/437 (36%), Gaps = 12/437 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +  + +    +    +  ++ I G   WS+   I  +V +SG++  E     ++ P  G+
Sbjct: 47  QRPEWSARGPVILGLVAMLVLIGGFGLWSLTARISGAVVASGQVEVEQRRQVVQHPDGGV 106

Query: 67  IKKFQVENGSQILQGTPLLTFEDI---ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           + +  + +G  +  G PL+  +         +++ +   I   R  ++ E++    +   
Sbjct: 107 VAEILIHDGESVTAGQPLIRLDGALLNTELAIVEGQYFEILARRGRLEAERADGKEIAFP 166

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++++ A    E Q L          S +F   + ++ +SL     +   +      ++ 
Sbjct: 167 QELIKAASSRPELQALV------DGQSSLFLARLDTLEQSLGQLAKQAEQVQSQIGGVDA 220

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           ++  L        ++L   ++L EK       +   ER   +    L E    +   +  
Sbjct: 221 QTRALEQQREFISQELRDQRSLLEKGLAQAPRVLALEREAARLDGLLGEATASRARAVTQ 280

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           + E+      + A   +    +L +      +   +   L +   +  I +P++G +   
Sbjct: 281 LAEIDLSRLEKTATRREAAETELRELGYRELELAERRRSLIERITRLEIRAPVSGVVQEL 340

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           Q  +  +  + + P+M I+P  +   + A++    I  V  G    +RF  ++     + 
Sbjct: 341 QITTPRSVIRPADPIMFIIPQDRPLVVAARIATINIDEVHPGQEVVLRFSSFSSRTTPEI 400

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
             ++ ++ P             YY   + I          ++L  G P EV       + 
Sbjct: 401 DGVLSRVSPDTLIDQATHA--PYYRAEVTIPPAEVEKLKGLDLVPGMPVEVYVQTGQRSP 458

Query: 423 AQEIIHPITDNWPKIFE 439
              ++ P++D + + F 
Sbjct: 459 MAYLVKPLSDYFTRAFR 475


>gi|159186155|ref|NP_356240.2| ABC transporter, membrane spanning protein (bacteriocin)
           [Agrobacterium tumefaciens str. C58]
 gi|159141289|gb|AAK89025.2| ABC transporter, membrane spanning protein (bacteriocin)
           [Agrobacterium tumefaciens str. C58]
          Length = 434

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 65/441 (14%), Positives = 160/441 (36%), Gaps = 13/441 (2%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
             W+ L+R+  + L    L  +        W++   I  +V + G ++ E ++ +++ P 
Sbjct: 2   DEWQALRRSIRSHLLVGGLGFLTLTGVFGGWAVGTEIVGAVIAQGSLVVETSLKKVQHPV 61

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFL 120
            G++ +  V +G ++  G  ++  +   T   + +   S+      +  ++ E+     +
Sbjct: 62  GGVVSELMVRDGDRVKAGDVVMRIDATMTRANLAIVVKSLDQFTARKARLEGERDRAASV 121

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                + ++A ++    +++   + +     V       + +       R+R +      
Sbjct: 122 VFPQSLRDRAGDAEVLAMMNAEQRLYEDRRAVRESKKRQLEQ-------RVRQLRDEISG 174

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE + +          ++L   ++L E+  + ++ L+  ER       ++         +
Sbjct: 175 LEAERAANVREQGMVDEELIRFRSLQERGLLDKSRLSTLERQATDIDGDIGRLRAGIAGI 234

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              I+E   +       + +E+  DL +      + + +    E   ++  IL+P  G +
Sbjct: 235 EAKISETALQILQIDEQWSEEVGSDLREMDARIGEYVERRVAAEDQLKRVDILAPQDGVV 294

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 +        + +M IVP      + AKV P+ I  +  G    +RF  +     
Sbjct: 295 HQLAVHTVGGVIAPGEQIMMIVPEVDKLVVEAKVAPQDIDQIYFGQVTNLRFSAFNQKTT 354

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKN 419
            +    +E+I   ++          YY V +  +           L  G P E   T   
Sbjct: 355 PEITGTVERISADVTVDQRT--GASYYLVRVATSQEQIKRLGEFSLMPGMPVEAFITTGE 412

Query: 420 TTLAQEIIHPITDNWPKIFER 440
            ++    + P+ D   + F +
Sbjct: 413 RSVLSYFLKPLLDQANRTFRQ 433


>gi|190570554|ref|YP_001974912.1| secretion protein, HlyD family [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019200|ref|ZP_03335007.1| secretion protein, HlyD family [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190356826|emb|CAQ54193.1| secretion protein, HlyD family [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995309|gb|EEB55950.1| secretion protein, HlyD family [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 503

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 82/425 (19%), Positives = 158/425 (37%), Gaps = 31/425 (7%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WS + PI+ +V +SGE++   N   ++    GII K  V+ G  + +  PL+   D+   
Sbjct: 87  WSAIAPIDGAVHASGEVIVSSNRKIVQHLGGGIISKILVKEGQAVKKDEPLVLLSDVNEK 146

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             + + K  +      +   ++ L  +    D LE + E +     + + K      K+F
Sbjct: 147 ANLSIIKEKL----LSLLATEARLIAIRGDLDTLEFSDEVKRLSNDELVNKAIKNQVKLF 202

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           N    S+     +   R++ +      L  + +          ++L   + L +   +S+
Sbjct: 203 NSQRKSILGKTDILQQRIKQLNDELAGLNFQLNAAHKQYDLITEELETKRQLLDSGHISK 262

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS----RDLEQN 269
             +   E+       E+   +   ++ +  + +   E  LE  N   +       +L++ 
Sbjct: 263 PHILALEKQF----AEIEGRVGHYRSAISQVQQKIGENELEIINVKNDAQERANAELKEV 318

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
             + AD   +L + E +  +  I SP  G +   +  +     Q   P++ IVP      
Sbjct: 319 NTSIADLKERLMVAEDSLARTIIKSPQDGIVTDIRYHTEGGVIQSGVPILSIVPSDDDLI 378

Query: 330 IRAKVTPKQIQHV---------------KKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           I AKV  + I+ +                +G    VR   Y+  R      I+  I P  
Sbjct: 379 IDAKVLTRNIEEILSAKKKDSNIVSIDGLEGLKVKVRLSAYSARRLSLINGIVNHISPDA 438

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
                  +   YY V + I     +   N+ L  G P EV    ++ TL   +  PI   
Sbjct: 439 LDD---PRMGRYYSVRVVIPKSELAQFKNVYLYPGMPVEVYIVTQSRTLLSFLFTPIIAT 495

Query: 434 WPKIF 438
           + + F
Sbjct: 496 FDRSF 500


>gi|307320227|ref|ZP_07599646.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|306894106|gb|EFN24873.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
          Length = 496

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 71/438 (16%), Positives = 166/438 (37%), Gaps = 13/438 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H     NL  N     +    + ++       W+ L  I+ +V + G I+ E +  E++ 
Sbjct: 62  HKPAQANLSGNWRKPARMGFGIVVLTFGIFGGWASLASIDSAVVAQGTIVVETDRKEVQH 121

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALD 118
              GI++   V+  + + +G  L+  +  E     ++ +    S+   +  +  E +  +
Sbjct: 122 LAGGIVRDVLVKPNAHVTEGQVLVRLDSTEAQAQGEIARSATFSLIAEQARLQAEMNGAE 181

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +    ++   +             +      ++F    S+    + +   R+       
Sbjct: 182 MVTFPRELTRASSGP-------LAKRAMEDQMRLFLKRRSARTNDVSILNERIAQSEQKI 234

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             ++++   +R  + S  ++   +  L +K  ++   L + +R       +L   + +  
Sbjct: 235 EAVQSQREAVRVQIESITEEYDKLAPLADKGIITATRLTELKRQRADLQGQLGAFVADIA 294

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                I+E   +         +E+S  L +     AD   KL + +    +  I +P +G
Sbjct: 295 GERHTISEARLQIEQVGRKVFEEVSAQLAETSAKLADAGEKLRVADDVLNRTEIRAPRSG 354

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +  +     +  + LM+IVP      + AK++P  I +V +G  A +R P +   
Sbjct: 355 RVIGFKVHTIGAVVRPGETLMEIVPDDDTLIVSAKMSPVDINNVGEGLPAEIRLPSFKAR 414

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTA 417
                   ++ +       +  +  Q YYE+ + +    F D    +LR G PAEV+   
Sbjct: 415 STPIAIGEVQSVAADALHDE--VTRQPYYELKVSVQVSKFPDQVRAKLRPGMPAEVIVAT 472

Query: 418 KNTTLAQEIIHPITDNWP 435
              ++   +  P+ D + 
Sbjct: 473 GERSVLSYLTQPLADAFR 490


>gi|262274867|ref|ZP_06052678.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Grimontia hollisae CIP 101886]
 gi|262221430|gb|EEY72744.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Grimontia hollisae CIP 101886]
          Length = 460

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 73/448 (16%), Positives = 156/448 (34%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + P   + +        + +ITW+    ++      G+++    V  I+
Sbjct: 12  MTDDVYGAMLTDAPVRYRFVIWGVFTFFVAIITWAAFASLDRVTRGEGKVIPSSQVQLIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI++   V+ G  + QG PL   +D         ++  + +LR +I   +S L  +
Sbjct: 72  SLDGGILQAMYVQEGQLVKQGEPLARIDDTRFRSDFAQQEEEVSSLRANIIRMRSELRSI 131

Query: 121 NNKYDVLEKAFE--------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                      +            +L +          + +   +  +   L++   ++ 
Sbjct: 132 KLSPAAPNWREQIAITLSPLEFPSELEESEPALIEGQRQEYEGRLLDLKNRLEILARQIL 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  ++E+K   L       +++L +   L  K  VS+ DL + ER V     EL  
Sbjct: 192 QKQQESQEVESKIRTLSNSFGLIKRELKITIPLARKGIVSEIDLLKLERQVNDLKGELSS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               Q  +   ++E   +       +  E    + + +   +         +   ++  I
Sbjct: 252 LRLMQPKIKASVDEAILKRREAALAFSNETRAKMSELETRLSRLTQAQVGAQDKVDKAVI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P+ GTI      +     Q    L++IVP      I AK+ PK I  +  G  + V+ 
Sbjct: 312 TAPVTGTIKTIHINTLGGVVQPGIDLIEIVPAEDQLLIEAKIAPKDIAFLHAGLPSVVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R       +E I    +Q +       +Y V ++    +    +   + +  G 
Sbjct: 372 TAYDFTRYGGLNGTLEHISADTTQDEE---GNSFYLVRIRTEKSSLEKKDGSELPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       T+ + +++PI       
Sbjct: 429 LTSVDIITGKRTVLEYLLNPILRAKESA 456


>gi|300113968|ref|YP_003760543.1| HlyD family type I secretion membrane fusion protein [Nitrosococcus
           watsonii C-113]
 gi|299539905|gb|ADJ28222.1| type I secretion membrane fusion protein, HlyD family
           [Nitrosococcus watsonii C-113]
          Length = 455

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 81/434 (18%), Positives = 177/434 (40%), Gaps = 15/434 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L  +     +   ++ +    G   W++   + ++V ++G +  E     I+    GI++
Sbjct: 28  LPTSDKYYRRLGMVILLFAFGGFGGWALTADLAVAVVATGAVSVESFKKTIQHLEGGIVE 87

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYD 125
           +  V++G Q+  G  LL  +       + + ++        R  +  E+     +     
Sbjct: 88  EIWVQDGDQVEAGNTLLVLDKTRVLSQLQIARMQYLTSGVARVRLLAEQRGARSIEFSEA 147

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +    F   +E L        +    +F     ++  +L     ++  +      L++  
Sbjct: 148 LRNSRFPRVKEVL--------AVQKALFQARREALAETLHGFDEQISQMKEQIDGLQSMI 199

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            + +++ +S + +   ++ LF++  VS   L + ER +     E+ +   E   +   I+
Sbjct: 200 KVSQSMAASLRVEAKDLRRLFKEGFVSNQRLRELERKILGIQGEIAQYRSEIVRLQSRIS 259

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   +  LE   + KE+   L Q Q + AD   ++T LE+  ++ TI +P+ GT+V    
Sbjct: 260 ENQTQKRLEQQEFQKEVGEQLRQAQASIADAEERMTALEEQIKRTTITAPVTGTVVGMAV 319

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  +P++ IVP      + A++  + I ++  G  A +RF  +        + 
Sbjct: 320 HTLGAVIRPGEPVLSIVPSGGDFVVEARIPDRDIDNIYTGQYAEIRFSAFNQRLTDVIEG 379

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLA 423
            +  I     + +  +  + YY+  +K+T     +   NI+L  G PAEV+      T A
Sbjct: 380 KVVHISADAFEDE--ITGERYYKARIKVTATGEKNMNRNIQLLAGMPAEVMIRTGERTFA 437

Query: 424 QEIIHPITDNWPKI 437
             +  PI D   + 
Sbjct: 438 SYVAKPIADMLARA 451


>gi|104779439|ref|YP_605937.1| type I toxin efflux membrane fusion protein [Pseudomonas
           entomophila L48]
 gi|95108426|emb|CAK13120.1| putative type I toxin efflux membrane fusion protein [Pseudomonas
           entomophila L48]
          Length = 458

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 69/426 (16%), Positives = 151/426 (35%), Gaps = 14/426 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L  + P  ++      I   + +I W+ + PI+      G+ +    V +I++   GI
Sbjct: 34  KALIEDAPRIVRLTIWGVIAFFLFMIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGI 93

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +   + G  +  G PLL  ++      +D  +     +   +    + ++    + D 
Sbjct: 94  VAEIFAKEGEIVEVGQPLLRLDETRFASNVDETEALRLAMALRVQRLNAEVEDKTLQID- 152

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                    E+L        +    ++      +   +     ++        +  +K +
Sbjct: 153 ---------EELRKAAPSQAANEQSLYQSRRQQLQDEVAGLQQQLVQKQQELREFNSKRA 203

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L   ++++ M + L  + A+SQ ++ +  R   ++  ++             I E
Sbjct: 204 QYANSLQLLRQEIAMSEPLVAQGAISQVEVLRLRRAEVENRGQMDSTSLAIPRAEAAIKE 263

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  +       +  E    L + +       +    L+    +  + SP+ G +      
Sbjct: 264 VESKIEETRGKFRSEALTQLNEARTELNKATATSKALDDRVNRTVVTSPVRGIVKQLLVN 323

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    +++IVP      I AK+ PK I  +  G  ATV+F  Y        KA 
Sbjct: 324 TIGGVIQPGSDIIEIVPLDDTLVIEAKILPKDIAFLHPGQEATVKFSAYDYTIYGGMKAK 383

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I       ++   T  YY + L+     L   +  + +  G  A V       T+  
Sbjct: 384 LEQIGADTITDEDKKTT--YYLIKLRTDKSHLGTDEKPLLIIPGMVATVDIMTGKKTIMS 441

Query: 425 EIIHPI 430
            ++ PI
Sbjct: 442 YLLKPI 447


>gi|170724220|ref|YP_001751908.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida W619]
 gi|169762223|gb|ACA75539.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida W619]
          Length = 458

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 77/427 (18%), Positives = 156/427 (36%), Gaps = 14/427 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L  + P  ++      I   + +I W+ + PI+      G+ +    V +I++   GI
Sbjct: 34  KALIEDAPRIVRLTIWGIIAFFLVMIIWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGI 93

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +   + G  +  G PLL  ++      +   +     +   +    + +D  +    +
Sbjct: 94  VAQIYAKEGQIVEVGEPLLRLDETRFASNVGETEADRLAMALRVQRLSAEVD--DKPLQI 151

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E+  ++   Q       Y S   +  +  IS + + L  K   +R     R    N   
Sbjct: 152 DEELRKAAPSQAASEQSLYQS-RRQQLHDEISGLEQQLVQKQQELREFTSKRAQYANSLQ 210

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           LLR       +++ M + L  + A+SQ ++ +  R   ++  ++             I E
Sbjct: 211 LLR-------QEIAMSEPLVAQGAISQVEVLRLRRAEVENRGQMDSTALAIPRAEAAIKE 263

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  +       +  E    L + +       +    L+    +  + SP+ G +      
Sbjct: 264 VQSKIEETRGKFRSEALTQLNEARTELNKATATGKALDDRVNRTMVSSPVRGIVKQLLVN 323

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    +++IVP      + AK+ PK I  +  G  ATV+F  Y        KA 
Sbjct: 324 TVGGVIQPGSDIVEIVPLDDSLVVEAKILPKDIAFLHPGQEATVKFTAYDYTIYGGLKAT 383

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I       ++   T  YY + L+     L   +  + +  G  A V       T+  
Sbjct: 384 LEQIGADTITDEDKKTT--YYLIKLRTEKSHLGTDEKPLLIIPGMVATVDIMTGKKTIMS 441

Query: 425 EIIHPIT 431
            ++ PI 
Sbjct: 442 YLLKPIM 448


>gi|223040599|ref|ZP_03610870.1| SapE [Campylobacter rectus RM3267]
 gi|222878147|gb|EEF13257.1| SapE [Campylobacter rectus RM3267]
          Length = 427

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 74/429 (17%), Positives = 167/429 (38%), Gaps = 21/429 (4%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               +T+  ++G+ G   W+   P++    + G++   ++   ++    G++ +  V++G
Sbjct: 11  RFGLLTIFILVGVFG--GWAAFAPLKSGAVAVGKVSVINDKKVVQHLEGGVVDEIYVKDG 68

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFE 132
            ++ +G  LL   + +    ++  +        L   +  ++   + +    ++ +    
Sbjct: 69  YKVKEGDILLKMRNSKLQAELNASQTDYLQNSVLEARLIAQRDNEEQIKFSDELKK---- 124

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
                 L    +       +FN     +    ++   R+  +Y     L    S  +  +
Sbjct: 125 ------LKGFKRASEAQISIFNEQRKILSDEKEILNQRISQLYKQIDGLNAIISSRKLRV 178

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S  ++      L+++    +  L   +R       E+  N  E   +   I E   +  
Sbjct: 179 ESLDEETKEWDRLYKEQLSDKIRLRDLKREKIAIDGEIASNTAEIARLNVQITETKSQMI 238

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           L  + + +++ + LE   ++     SK   L     +  + +P++GTIV   + +     
Sbjct: 239 LRESAFKEDVLKQLESVTKSINTLRSKYIALNDQLARTEVRAPVSGTIVGMTAHTVGGVI 298

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +   P+M IVP S    + A++    I  V  G  + VRF  +   +    +  +  I  
Sbjct: 299 RPGDPIMYIVPDSTEYIVEARMNLTDIDKVTIGLLSDVRFSAFELQQAHVVEGEVVYISA 358

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSD---NNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
              Q  N     ++YE+ +K+TD    +   N   L  G PAEV+    N T+   I++P
Sbjct: 359 DSLQDGN---GHQFYEIKVKLTDKGVKELENNKFFLLPGMPAEVMVQTSNRTVLSYILNP 415

Query: 430 ITDNWPKIF 438
            T+ + + F
Sbjct: 416 FTNMFKRAF 424


>gi|148258343|ref|YP_001242928.1| HlyD family secretion protein [Bradyrhizobium sp. BTAi1]
 gi|146410516|gb|ABQ39022.1| putative secretion protein (HlyD family) [Bradyrhizobium sp. BTAi1]
          Length = 446

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 67/410 (16%), Positives = 162/410 (39%), Gaps = 13/410 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    I  ++ + G+I+ E NV +++ P  G++ + +  +G  +  G  ++  +D  T 
Sbjct: 44  WAATQQISGALIAPGQIVVESNVKKVQHPTGGVVGELRARDGDVVKSGDIVVRLDDTVTK 103

Query: 94  DLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + +   ++  L      ++ E+     +     +L++  +     LL       ++ +
Sbjct: 104 ASLAIVTKNLDALLARAARLEAEQRGWAKILFPQQLLQRLSDPDVSGLL-------ASET 156

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K+F   ++           R+  +      L  + S     ++  QK+L  ++ L+E++ 
Sbjct: 157 KLFEVRVNGRIGQKAQLRERVAQLTEEIEGLSAQVSAKEQEIALVQKELEGVRQLYEQHL 216

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V  + L   ER   +   E  + I  +      I+E   +      + + E+S+DL +  
Sbjct: 217 VQLSRLTTLERDTARLNGERAQFIAARAQAKGKISETELQIIQVDKDMVSEVSKDLRETT 276

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               + + +    E    +  I +P  G ++ +   +          +M IVP +    +
Sbjct: 277 DKIGEFVERKVTAEDQLRRVDIRAPQDGMVLQSSVHTVGGVITAGDTIMLIVPQADDLQV 336

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            AKV P+ I  ++ G    +R   +      +   ++ ++ P ++        Q YY + 
Sbjct: 337 EAKVNPQDIDKLQVGQKTLLRLSAFNQRTTPELNGVVSRVSPDVTTDQRT--GQSYYTIR 394

Query: 391 LKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           + +     +   +++L  G P E      + T+   ++ P+ D   + F 
Sbjct: 395 VSMPPQEIARLGDVKLIPGMPVEAFVQTGDRTVLSYLMKPLHDQLMRAFR 444


>gi|115361113|ref|YP_778250.1| HlyD family type I secretion membrane fusion protein [Burkholderia
           ambifaria AMMD]
 gi|115286441|gb|ABI91916.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria AMMD]
          Length = 474

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 65/414 (15%), Positives = 140/414 (33%), Gaps = 13/414 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +   ++  I+  + W+    ++      G+++    V  +++   GI+ +  V  G  + 
Sbjct: 60  ILWATLAFIVIALLWAAFAEVDEVTVGEGKVIPSSRVQVVQNLEGGIVSEIMVRVGQVVQ 119

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G PL+  +D   T      +     L   I    +  +                   L 
Sbjct: 120 KGQPLMRIDDTRFTSSYKEGQAKDAALLARIARLSAEANGAAF----------VVPAALA 169

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                       +F      +  +L +   +         +  ++   L+   +   K+L
Sbjct: 170 RANPGLLDEERSLFESRQRELQANLDVLRQQAEQHRQELAEKRSREGQLQHSYALVAKEL 229

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            +   L EK AVS  ++ + ER       +L         +     E   + +   A++ 
Sbjct: 230 ALTSPLVEKGAVSDVEVLRLERQATDMKGDLDATRLAMPRLEAAYREARQKIDETTAHFR 289

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            +  ++L   +   +   +    LE    +  + +P+ G I   +  +     Q    L+
Sbjct: 290 ADAMKELNLARADQSALSAANVALEDRVTRTLVRAPLKGMIKQIKINTVGGVIQPGMDLL 349

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-SQQD 378
           +IVP      I A+V P  I  +  G  ATV+   Y       F A++E I         
Sbjct: 350 EIVPLDDTLLIEARVRPADIAFLHPGQDATVKLSAYDFSIYGGFPAVVEDISADTIVPDR 409

Query: 379 NNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              +   YY V+++   +  +     + +  G  A V       T+   ++ P+
Sbjct: 410 PGEKPDSYYRVLVRTRQSKPSGRSQPVAIVPGMIATVDIRTGRRTVLHYLLKPV 463


>gi|307947327|ref|ZP_07662661.1| HlyD family type I secretion membrane fusion protein [Roseibium sp.
           TrichSKD4]
 gi|307769469|gb|EFO28696.1| HlyD family type I secretion membrane fusion protein [Roseibium sp.
           TrichSKD4]
          Length = 436

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 67/437 (15%), Positives = 164/437 (37%), Gaps = 13/437 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +++K +    ++    L +        W+    +  +V + G+++       ++    GI
Sbjct: 7   QSVKTSAKGLVRIGLTLVLTLFFAGGAWASFAKLSGAVIAPGQLVVLGKPKTVQHLDGGI 66

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNK 123
           + +  +++G ++LQ   L+  +D      + + +  ++     R  +  E+     +   
Sbjct: 67  VAEIAIDDGDKVLQDEVLIRLDDTLLKANLKIYENRLREGVAQRSRLVAERDEQGGIVWD 126

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++L           ++ +    S   K+F    ++    +     +++        +E 
Sbjct: 127 DEILALFG-------VEIMQSVKSGQQKLFEARNTTREGQISQLREKIKQFQNQISGIEA 179

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             S  +  L    ++LT ++ L +K  + ++ L   ER       ++ E   E   +   
Sbjct: 180 LKSSKKTQLGFLDEELTSVRTLNKKGLMPKSQLMALERQREDIIGQVAEQDAELARIQNA 239

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I+E   +       + + +  +L Q +    D   +L    +   +  I +P++G I   
Sbjct: 240 ISETEIQILQIDREFRQTVLTELRQVEAEVNDMTQQLQATLEQLNRVEIKAPVSGIIHEL 299

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             F+         P+++I+P   +  I A V P+ +  +  G  AT+RF  +      + 
Sbjct: 300 SVFTIGGVIGPGDPVLQIIPQDGVFEIEADVEPQFVDELYPGQPATLRFSAFNQRTTPEL 359

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
              ++ + P +   +       +Y+V + I D         +L +G P E     K+ T 
Sbjct: 360 NGFVKTVSPNVVVDEQT--GMTFYKVRMAIPDDQLERLKGQKLISGMPVEAFIKTKDRTA 417

Query: 423 AQEIIHPITDNWPKIFE 439
              +  P+ D   + F 
Sbjct: 418 LNYLTKPLMDQINRAFR 434


>gi|227357940|ref|ZP_03842283.1| alkaline proteinase secretion protein [Proteus mirabilis ATCC
           29906]
 gi|227161849|gb|EEI46878.1| alkaline proteinase secretion protein [Proteus mirabilis ATCC
           29906]
          Length = 441

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 78/433 (18%), Positives = 167/433 (38%), Gaps = 7/433 (1%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            + + +  +    L     + ++G+   I W+   P++  V + G ++   N   ++S  
Sbjct: 9   PLSEKISDDPKKFLVIGWTVVLLGLAIFIFWAAFAPLDKGVPAIGNVVISGNKKSVQSSV 68

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GII    V+NG  +  G  L+    +++  L+        NL   + T++     LN +
Sbjct: 69  EGIITHIFVKNGDPVSAGQTLIQLSPLQSQALVKSLSEQYDNL---LITQQRLYAELNQQ 125

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +     +     +   K     +++ N   + +   +      +  I      L+ 
Sbjct: 126 TS-FKLNNNEKYYSSTENREKLLLQQNRLLNEKSAELISEINGYKAAIDGITSRLTHLKR 184

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                ++ +S+ Q  L  ++ L  +  + ++   +  R + ++  +L E   +   + + 
Sbjct: 185 SIQNKKSQISNLQNQLNDLQILANEGYIPRHRYQEMIRELAENNNQLNETFGQISALEKQ 244

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E         ANY +    +L + Q   ++   +L I      +  I++PI+GT++  
Sbjct: 245 KLEYEQRILQRNANYYQLARTELNKIQLQISETEKQLIIETDKLAKMAIIAPISGTVMDL 304

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             F+   + +  Q LM IVP      I A++ P  I  V  G    + F  +      K 
Sbjct: 305 SVFTQGGFVKTGQTLMDIVPEDHQLVIEARLAPHLIDKVTPGLPVDLIFSAFNQNTTPKI 364

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNTTL 422
              +  I       +    T+ YY+V++ I D    +DN  +L+ G P +V     + +L
Sbjct: 365 PGEVTIISADRLIDERT--TEPYYQVLINIKDYTLLADNKNKLKAGMPVDVFIKTGDRSL 422

Query: 423 AQEIIHPITDNWP 435
              +  P+ D   
Sbjct: 423 LNYLFKPVLDRLH 435


>gi|37675993|ref|NP_936389.1| putative RTX transport protein [Vibrio vulnificus YJ016]
 gi|37200533|dbj|BAC96359.1| putative RTX transport protein [Vibrio vulnificus YJ016]
          Length = 442

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 75/441 (17%), Positives = 169/441 (38%), Gaps = 10/441 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
              MW N +  + +  +R+  L    ++ +  W+    ++  V   G+++   ++  I+S
Sbjct: 3   SQIMWSNNRIAYRS--RRLIWLCAALVLAIGVWASWATLDEVVVGDGKVVPSLSIQTIQS 60

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALD 118
              GIIK+  V  G Q+++G PL+  +D             ++ L      ++ E  ++ 
Sbjct: 61  LEGGIIKQVLVSQGEQVVKGQPLMVLDDTRFRASYQESDQQLQTLLAQKKRLELELQSIV 120

Query: 119 FLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                 D  ++   +++      D + +      + ++  +  +   L+    R+     
Sbjct: 121 VDGQATDWQQQVRIAKQPYPSGQDEVTRAEFNARENYHQRLEQLDSELEESALRIEQQSQ 180

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              D  N  S L   ++  QK+L M++++ +  AV++ +L + +R   K   ++      
Sbjct: 181 AYQDTLNSISTLENSMAIVQKELNMLEDVVKTGAVAEVELLKLKRDYVKLQGDISSAKVL 240

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +      +E   +      ++  +    L +     A      + +     +  ILSP+
Sbjct: 241 AQKQKAAYSESIADYRGIALDFRTKARGQLNEVVAELARLQESQSAIADQLRRTEILSPV 300

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+      S     +  +P+M++VP      + A++ P+ I +VK G  ATV+F  Y 
Sbjct: 301 DGTVKDVLIRSIGGVVRPGEPIMELVPLDSRLIVEARIAPQDIAYVKVGLEATVKFTAYD 360

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +     K  +  +     + +       YY   +++     S  N  +  G  A V   
Sbjct: 361 FVIYGGQKGKVVYVSADSLKTEE---GDPYYRAHIELMTDDASQQNFRIIPGMQAMVDIL 417

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
           +   T+    + P+       
Sbjct: 418 SGEKTVLSYWLKPLLRAKETA 438


>gi|317403307|gb|EFV83823.1| HlyD-family secretion protein [Achromobacter xylosoxidans C54]
          Length = 478

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 62/402 (15%), Positives = 136/402 (33%), Gaps = 13/402 (3%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
              I+  V   G+++    V  I+S   GI+++  V+ G ++  G  LL  +       +
Sbjct: 87  FGYIDEVVRGEGKVVPSRQVQIIQSLDGGIVEEILVKPGQEVEAGQILLKIDSTRFASSL 146

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
                   +L       K+                    E++L             +   
Sbjct: 147 GENNAEYLSLLAKSARLKALATGEPF----------VAPEEVLKQAPGLAEMERNAWQAR 196

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            + +  ++ +   +++       +   K     A      ++L + + L +  AVS+ DL
Sbjct: 197 TTELNATVNVAREQLKQRQEELRETIAKRDQASASCGLTSRELQVTRPLLKSGAVSEVDL 256

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R V +   E +    +   +   I E   +      N   +   +L +     +  
Sbjct: 257 LRLQRDVARYCGEQKGAEAQIDRIQASIKEAQSKLEESELNIRNQARNELSETNTKLSTL 316

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                 L    +   + +P+ GT+    + +     Q  + +++IVP      +  ++ P
Sbjct: 317 REGKLALADRVKLAEVRAPVRGTVKTLFNNTVGGVVQPGKDIIEIVPKDDTLLLEVRILP 376

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           + I  +     A V+F  Y        +  +E+I       +   +   YY V ++    
Sbjct: 377 RDIGFLHPDQKAEVKFTAYDFAIYGGLEGKVEQIGADTVTDE---KGNSYYVVRVRTDRS 433

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
              D N+ +  G  AEV       T+ Q ++ P+       F
Sbjct: 434 TVGDKNLPIIPGMVAEVHVLTGKRTVLQYLLKPVLRAKANAF 475


>gi|146305754|ref|YP_001186219.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           mendocina ymp]
 gi|145573955|gb|ABP83487.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           mendocina ymp]
          Length = 438

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 69/425 (16%), Positives = 156/425 (36%), Gaps = 10/425 (2%)

Query: 15  ASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
             ++R+    ++   G    W+ L P++ +V +   +  +     ++    GI++   V 
Sbjct: 18  RPIRRLGYCILVVTFGLFGGWATLAPLDGAVLAPAVVTVKSYRKTVQHLEGGIVRALNVR 77

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +G  +  G  LL  +D +     ++ +  +  L       ++     N    V + A + 
Sbjct: 78  DGDLVEAGEILLELDDTQLRAEFEMVRSQLIALLAQESRLRAEQTDHNGALPVPDFAPDD 137

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
              Q      +  +   ++F     S+   + ++   +  +      LE   S  + L  
Sbjct: 138 PRSQ------EAMANEEQIFQTRRHSLAGEVSIREKTIVQLETQIAGLEAMVSSKQELAR 191

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           S+  ++  ++ L  +  +    L  QER++ +   E+ E+          I+E   +   
Sbjct: 192 SYTDEIADLRTLLAEGFIDVQRLRDQERLLTRLRSEIAEHQSAIAQARLRISEAGLQILQ 251

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               +  E++  L        +   +L   +   E+  + +P +G ++     +      
Sbjct: 252 LNKAFASEVASQLGDTHNRVRELRERLLATQSRLERTQLRAPESGMVIGLAIHTIGGVIG 311

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              PL+ IVP      + A + P  I  +  G TA +RF  + +      + ++  +   
Sbjct: 312 AGTPLLDIVPAGAELIVEAHIAPTDIDRLAIGRTADIRFSAFKNSTTPVIEGLLTHLSAD 371

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
             +  +      YY   L++T+   +    + L  G PAEVL      TL   ++ P  D
Sbjct: 372 --RLIDTASGTPYYLGRLELTENGRASLGALTLLPGMPAEVLINTGERTLLNYLMQPAGD 429

Query: 433 NWPKI 437
              + 
Sbjct: 430 ALARS 434


>gi|197284185|ref|YP_002150057.1| type I secretion protein [Proteus mirabilis HI4320]
 gi|194681672|emb|CAR40750.1| type I secretion protein [Proteus mirabilis HI4320]
          Length = 441

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 82/437 (18%), Positives = 168/437 (38%), Gaps = 15/437 (3%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            + + +  +    L     + ++G+   I W+   P++  V + G ++   N   ++S  
Sbjct: 9   PLSEKISDDPKKFLVIGWTVVLLGLAIFIFWAAFAPLDKGVPAIGNVVISGNKKSVQSSV 68

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTE-KSALDF 119
            GII    V+NG  +  G  L+    I++  L+        NL   +  +  E      F
Sbjct: 69  EGIITHIFVKNGDPVSAGQTLIQLSPIQSQALVKSLSEQYDNLLITQQRLYAELNQQTSF 128

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
             N  D    + E+RE+ LL      +   ++        +   +      +  I     
Sbjct: 129 KLNNSDKYYSSTENREKLLLQQNRLLNEKSAE--------LISEINGYKAAIDGITGRLT 180

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L+      ++ +S+ Q  L  ++ L  +  + ++   +  R + ++  +L E   +   
Sbjct: 181 HLKRSIQNKKSQISNLQNQLNDLQILANEGYIPRHRYQEMVRELAENNNQLNETFGQISA 240

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + +   E         AN+ +    +L + Q   ++   +L I      +  I++PI+GT
Sbjct: 241 LEKQKLEYEQRILQRNANFHQLARTELNKIQLQISETEKQLIIETDKLAKMAIIAPISGT 300

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           ++    F+   + +  Q LM IVP      I A++ P  I  V  G    + F  +    
Sbjct: 301 VMDLSVFTQGGFVKTGQTLMDIVPEDHQLVIEARLAPHLIDKVTPGLPVDLIFSAFNQNT 360

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAK 418
             K    +  I       +    T+ YY+V++ I D    +DN  +L+ G P +V     
Sbjct: 361 TPKIPGEVTIISADRLIDERT--TEPYYQVLINIKDYTLLADNKNKLKAGMPVDVFIKTG 418

Query: 419 NTTLAQEIIHPITDNWP 435
           + +L   +  P+ D   
Sbjct: 419 DRSLLNYLFKPVLDRLH 435


>gi|222080921|ref|YP_002540284.1| protein secretion protein [Agrobacterium radiobacter K84]
 gi|221725600|gb|ACM28689.1| protein secretion protein [Agrobacterium radiobacter K84]
          Length = 436

 Score =  320 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 78/441 (17%), Positives = 163/441 (36%), Gaps = 13/441 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M        +R+ P     M    ++ +  +   +    I  +V + G ++ +  V  ++
Sbjct: 1   MSGLKLSPSERSIPRLSAVMLGTIVLLVGVMGGLAATTEISGAVIAPGTLVVDSYVKPVQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSAL 117
               GI+   QV+NG ++  G  L+  +D +T+  + + +  +  L      +D E+   
Sbjct: 61  HLKGGIVGDIQVKNGDRVDAGQLLIHLDDTQTSANLAIIRKRLDELFARTARLDAERDGA 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +    ++L +A E       D + +  +   ++F+  ++S          R++ +   
Sbjct: 121 PAIAFPAELLSRAGE-------DEIARTIAGERRLFDDRLASRQSRKSQLGERIQQLSQE 173

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              L  + +  R  +    K+L  ++ LFEK  V    +   +R     T EL   +   
Sbjct: 174 ADGLVAQENGKRIEIDLIAKELASLQRLFEKGIVPAAKVYALQRESASLTGELGNLVSSI 233

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 + E   +      ++  E+S  L Q Q      + +L   E   ++  I +P A
Sbjct: 234 AQTKGKMTETELQITQVDDDHSAEVSEQLRQAQSDTGLFLERLIAAEDDLKRIDIRAPQA 293

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I +    ++       + +M+IVP         K++P+ I  V  G   T+R   +  
Sbjct: 294 GIIDHLSVHAAGAVISPGETVMQIVPDQDALVAELKLSPQDIDQVIVGQPVTLRLSAFNQ 353

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFT 416
               +  A I KI   ++          YY +   ++   +S    +    G P E    
Sbjct: 354 RDTPELNADITKISAELTTDQ--HSGASYYVLRAHVSKAEWSRLGKLTAVPGMPVEGFLQ 411

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
               T+   +  P+ D   + 
Sbjct: 412 TGARTVLAYLTKPMADQMARA 432


>gi|6013391|gb|AAF01329.1| membrane fusion protein [Pseudomonas chlororaphis]
 gi|121483785|gb|ABM54444.1| membrane fusion protein [Pseudomonas chlororaphis]
          Length = 439

 Score =  319 bits (818), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 71/439 (16%), Positives = 164/439 (37%), Gaps = 15/439 (3%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           +  + ++R+     +   +L+++G      W+ L P++  +   G ++       ++S  
Sbjct: 7   YAPERVERDAGFFARMGWILALVGAGSFFVWAALAPLDQGIPVQGTVVVSGKRKAVQSMS 66

Query: 64  SGIIKKFQVENGSQILQGTP-LLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
           SG++ +  V  G  + QG   L   +  +    +   +   +          +E+  L  
Sbjct: 67  SGVVSRILVREGESVKQGQARLFRLDQTQVAADVQSLQAQYRMAMASLARWRSERDNLKQ 126

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           ++     L  + + R   +L+   +  S+  + F+   + +  +++    ++  +   R 
Sbjct: 127 VDFPAP-LSDSDDPRLALVLEGQRQLFSSRREAFSREQAGIRANIEGATAQLAGMRRART 185

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           DL +++  LR  LS        ++ L +   + +N L + +R + +   EL +N  E   
Sbjct: 186 DLGSQAESLRQQLS-------NLQPLADNGYIPRNRLLEYQRQLSQVQQELAQNTGESGR 238

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + I E   +       Y KE+   L + Q        +LT      +   I++   G 
Sbjct: 239 VEQGILESRLKLQQHSEEYQKEVRIQLAEAQLKTQTLEQQLTSAGFDLQHSEIIATADGI 298

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            V     +     +Q + L++IVP      +  ++    +  V       + F  +   R
Sbjct: 299 AVNLGVHTEGAVVRQGETLLEIVPQGTHLEVEGRLPVNLVDKVGTHLPVDILFTVFNQSR 358

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +    +  I     Q  +      YY +   ++D A    N + ++ G PAE+     
Sbjct: 359 TPRVPGEVSLISAD--QMLDEKTGMPYYVLRSSVSDQAMEKLNGLVIKPGMPAEMFVRTG 416

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P+ D     
Sbjct: 417 ERSLLNYLFKPLLDRAGSA 435


>gi|320158136|ref|YP_004190514.1| secretion protein, HlyD family [Vibrio vulnificus MO6-24/O]
 gi|319933448|gb|ADV88311.1| secretion protein, HlyD family [Vibrio vulnificus MO6-24/O]
          Length = 442

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 75/441 (17%), Positives = 168/441 (38%), Gaps = 10/441 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
              MW N +  + +  +R+  L    ++ +  W+    ++  V   G+++   ++  I+S
Sbjct: 3   SQIMWSNNRIAYRS--RRLIWLCAALVLAIGVWASWATLDEVVVGDGKVVPSLSIQTIQS 60

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALD 118
              GIIK+  V  G Q+++G PL+  +D             ++ L      +D E  ++ 
Sbjct: 61  LEGGIIKQVLVSQGEQVVKGQPLMVLDDTRFRASYQESDQQLQTLLAQKKRLDLELQSIV 120

Query: 119 FLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                 D  ++   +++      D + +      + ++  +  +   L+    R+     
Sbjct: 121 VDGRATDWQQQVRIAKQPYPSGQDEVTRAEFNARENYHQRLEQLDSELEESALRIEQQSQ 180

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              D  N    L   ++  QK+L M++++ +  AV++ +L + +R   K   ++      
Sbjct: 181 AYQDTLNSIRTLENSMAIVQKELNMLEDVVKTGAVAEVELLKLKRDYVKLQGDISSAKVL 240

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +      +E   +      ++  +    L +     A      + +     +  ILSP+
Sbjct: 241 AQKQKAAYSESIADYRGIALDFRTKARGQLNEVVAELARLQESQSAIADQLRRTEILSPV 300

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+      S     +  +P+M++VP      + A++ P+ I +VK G  ATV+F  Y 
Sbjct: 301 DGTVKDVLIRSIGGVVRPGEPIMELVPLDSRLIVEARIAPQDIAYVKVGLEATVKFTAYD 360

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +     K  +  +     + +       YY   +++     S  N  +  G  A V   
Sbjct: 361 FVIYGGQKGKVVYVSADSLKTEE---GDPYYRAHIELMTDDASQQNFRIIPGMQAMVDIL 417

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
           +   T+    + P+       
Sbjct: 418 SGEKTVLSYWLKPLLRAKETA 438


>gi|253988089|ref|YP_003039445.1| alkaline protease secretion protein apre [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253779539|emb|CAQ82700.1| alkaline protease secretion protein apre [Photorhabdus asymbiotica]
          Length = 444

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 71/421 (16%), Positives = 174/421 (41%), Gaps = 13/421 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L+   L+  +GI+G + W+   P++  V+SSG ++ + N   +++P SGII +  V  G 
Sbjct: 25  LRLGWLVIGVGILGFLIWAAFAPLDKGVASSGVVVVDGNRKTVQAPASGIISQIMVVEGE 84

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            I  G  L+    ++    +D  +  +         +  E+   D L     + +   E 
Sbjct: 85  TIKAGQTLVQLSQVQAKAQVDAIQDQLYTTLATETRLLAEQHGDDMLVFPEILQQLQSEP 144

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R ++++    +  ++  ++    ++ + +S+     +++ +  + +    + + L+    
Sbjct: 145 RVKEIIALQKQLFASRREMLQSDLAGLEQSVAGTHFQIKGLKASLVSKRVQQTALK---- 200

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              + +T +K+L ++    +N   +  R   +    + E       + + + E       
Sbjct: 201 ---EQMTNLKSLADEGYFPRNRYLELLREQAELNSSIAEMEGRAGQLEKQLQETQQRIIQ 257

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A+Y +E+   L + Q   ++  +KL   +      +I++P+ GT+V    F+      
Sbjct: 258 RKADYQREVRTQLAEEQVAASEYRNKLDTAQFELMHTSIVAPVDGTVVGLNIFTQGGVVA 317

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             + LM+I+P+     +  +V       + KG    + F  +   R  K +  +  +   
Sbjct: 318 PGEKLMEILPNQMALEVETRVAVNLADKISKGLDVDLMFTAFNQNRTPKIEGKVVMVSAD 377

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
             +  + + +Q YY++   ++         +++R G P EV     + +L   +  P+ D
Sbjct: 378 --RLVDPVTSQPYYQMRAVVSPEGMEKLKGLDIRPGMPVEVFVKTGSRSLLSYLFKPLWD 435

Query: 433 N 433
            
Sbjct: 436 R 436


>gi|3493598|gb|AAC33451.1| ZapC [Proteus mirabilis]
          Length = 441

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 79/433 (18%), Positives = 168/433 (38%), Gaps = 7/433 (1%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            + + +  +    L     + ++G+   I W+   P++  V + G ++   N   ++S  
Sbjct: 9   PLSEKISDDPKKFLVIGWTVVLLGLAIFIFWAAFAPLDKGVPAIGNVVISGNKKSVQSSV 68

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GII    V+NG  +  G  L+    I++  L+        NL   + T++     LN +
Sbjct: 69  EGIITHIFVKNGDPVSAGQTLIQLSPIQSQALVKSLSEQYDNL---LITQQRLYAELNQQ 125

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +     +     +   K     +++ N   + +   +      +  I      L+ 
Sbjct: 126 TS-FKLNNNEKYYSSTENREKLLLQQNRLLNEKSAELISEINGYKAVIDGITSRLTHLKR 184

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                ++ +S+ Q  L  ++ L  +  + ++   +  R + ++  +L E   +   + + 
Sbjct: 185 SIQNKKSQISNLQNQLNDLQILANEGYIPRHRYQEMIRELAENNNQLNETFGQISALEKQ 244

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E         ANY +    +L + Q   ++   +L I +    +  I++PI+GT++  
Sbjct: 245 KLEYEQRILQRNANYYQLARTELNKIQLQISETEKQLIIEKDKLAKMAIIAPISGTVMDL 304

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             F+   + +  Q LM IVP      I A++ P  I  V  G    + F  +      K 
Sbjct: 305 SVFTQGGFVKTGQTLMDIVPEDHQLVIEARLAPHLIDKVTPGLPVDLIFTAFNQNTTPKI 364

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA-FSDNNIELRNGFPAEVLFTAKNTTL 422
              +  I       +    T+ YY+V++ I D    +DN  +L+ G P +V     + +L
Sbjct: 365 PGEVTIISADRLIDERT--TEPYYQVLINIKDYTLLADNKNKLKAGMPVDVFIKTGDRSL 422

Query: 423 AQEIIHPITDNWP 435
              +  P+ D   
Sbjct: 423 LNYLFKPVLDRLH 435


>gi|332534697|ref|ZP_08410526.1| type I secretion membrane fusion protein, HlyD family
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035847|gb|EGI72330.1| type I secretion membrane fusion protein, HlyD family
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 473

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 71/426 (16%), Positives = 159/426 (37%), Gaps = 15/426 (3%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W+ +++  PAS + +  L  +  I LI WS    ++      G ++  + +  I+S   G
Sbjct: 53  WEKMQQ-EPASARLLLYLICLTFICLIVWSGFANLDEVARGEGRVIPSNKLQLIQSYDGG 111

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +++K  V+ G  + +G  L+  +           +  +++L   +   ++          
Sbjct: 112 MVEKINVKEGQIVNEGDVLIKIDPTRFISSFRENQSKVESLSAKVARLRA---------- 161

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + +K      E ++    +       ++      + + + +   ++   + + ++ +   
Sbjct: 162 LTQKKELVFSESVIKNAPRVVQHERSLYLSNSQELEQQVSIHKRQLEQRHQDYIEAKAAL 221

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               + L    ++L++ + L    A+S  D+ + ER +     E+          L  IN
Sbjct: 222 EQHTSALRLTNRELSVTRPLLRTGAISDIDIIRLERQIVDLNGEINRTKAVINRSLSAIN 281

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E  ++        +   + +L +            + L     Q  I SP+ GT+     
Sbjct: 282 EAKNKVTEVELVMINRWNNELSEALLRLDSIKETESGLADKVTQTEIRSPVKGTVQRLLV 341

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     Q    +M+IVP      + AK+ PK I  ++ G +A ++F  Y        +A
Sbjct: 342 NTVGGILQPGSDVMEIVPLDDQLVVEAKIPPKDIAFLRPGQSAMIKFSAYDFAVYGGLEA 401

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            +  I       D       +Y V LK T   FS   + +  G   +V       T+ + 
Sbjct: 402 EVLHISADTITDDRE---NTFYLVQLKTTKNNFSKE-LTIIPGMTTQVDIITGKKTVLEY 457

Query: 426 IIHPIT 431
           ++ P+ 
Sbjct: 458 LLKPVL 463


>gi|27367863|ref|NP_763390.1| secretion protein, HlyD family [Vibrio vulnificus CMCP6]
 gi|27359436|gb|AAO08380.1|AE016813_132 Secretion protein, HlyD family [Vibrio vulnificus CMCP6]
          Length = 442

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 75/441 (17%), Positives = 168/441 (38%), Gaps = 10/441 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
              MW N +  + +  +R+  L    ++ +  W+    ++  V   G+++   ++  I+S
Sbjct: 3   SQIMWSNNRIAYRS--RRLIWLCAALVLAIGVWASWATLDEVVVGDGKVVPSLSIQTIQS 60

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALD 118
              GIIK+  V  G Q+++G PL+  +D             ++ L      +D E  ++ 
Sbjct: 61  LEGGIIKQVLVSQGEQVVKGQPLMVLDDTRFRASYQESDQQLQTLLAQKKRLDLELQSIV 120

Query: 119 FLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                 D  ++   +++      D + +      + ++  +  +   L+    R+     
Sbjct: 121 VDGRATDWQQQVRIAKQPYPSGQDEVTRAEFNARENYHQRLEQLDSELEESALRIEQQSQ 180

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              D  N    L   ++  QK+L M++++ +  AV++ +L + +R   K   ++      
Sbjct: 181 AYQDTLNNIRTLENSMAIVQKELNMLEDVVKTGAVAEVELLKLKRDYVKLQGDISSAKVL 240

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +      +E   +      ++  +    L +     A      + +     +  ILSP+
Sbjct: 241 AQKQKAAYSESIADYRGIALDFRTKARGQLNEVVAELARLQESQSAIADQLRRTEILSPV 300

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+      S     +  +P+M++VP      + A++ P+ I +VK G  ATV+F  Y 
Sbjct: 301 DGTVKDVLIRSIGGVVRPGEPIMELVPLDSRLIVEARIAPQDIAYVKVGLEATVKFTAYD 360

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +     K  +  +     + +       YY   +++     S  N  +  G  A V   
Sbjct: 361 FVIYGGQKGKVVYVSADSLKTEE---GDPYYRAHIELMTDDASQQNFRIIPGMQAMVDIL 417

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
           +   T+    + P+       
Sbjct: 418 SGEKTVLSYWLKPLLRAKETA 438


>gi|224823499|ref|ZP_03696608.1| type I secretion membrane fusion protein, HlyD family [Lutiella
           nitroferrum 2002]
 gi|224603954|gb|EEG10128.1| type I secretion membrane fusion protein, HlyD family [Lutiella
           nitroferrum 2002]
          Length = 472

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 60/424 (14%), Positives = 145/424 (34%), Gaps = 13/424 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            +    P   +    L +  +   + W+ L  ++      G+++    +  I+S   G++
Sbjct: 52  AILEQQPVRPRFFVWLLLAIVFAGLVWASLAQVDEVARGEGKVVPSSQIQRIQSLDGGVV 111

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V  G+++ +   LL  +       ++  +    +L       ++  D         
Sbjct: 112 SEILVREGNRVQKNQLLLKIDSTRFESSLNENRAQYLSLLAKAARLRAITDGRAF----- 166

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                    ++        +   +++      +  ++ +   ++       +++  +   
Sbjct: 167 -----VVPPEVQREAPDIGAHELELYGSKRRELEANVSIAREQLAQRNQELVEVRARREQ 221

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
               L    K+L + + L +  AVS  DL + ER V +   E      +   +   I E 
Sbjct: 222 AEQGLGYTTKELQVTRPLKDSGAVSDVDLLRLERDVSRFRGERDMAAAQIPKIQAAIAEA 281

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +      ++  + S +L +     +        L    +   + SP+ GT+      +
Sbjct: 282 QRKIEEVELSFRNQASAELSETLGKLSSLTETRVALNDRVKLAELRSPVNGTVKQLLVNT 341

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  + +++IVP      + A++ P+ I  +  G  A VRF  Y         A +
Sbjct: 342 IGGVVQPGKDIVEIVPTEDTLLLEARILPRDIAFLHPGQKAFVRFTAYDFAIYGGLDATL 401

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
           E+I       D   +   +Y V ++         +  +  G  AEV       ++   ++
Sbjct: 402 EQIGADTVTDD---KGNAFYLVRVRTRKSYLGSASRPIIPGMVAEVDIMTGKKSILSYLL 458

Query: 428 HPIT 431
            P+ 
Sbjct: 459 KPVL 462


>gi|148973908|ref|ZP_01811441.1| Secretion protein, HlyD family [Vibrionales bacterium SWAT-3]
 gi|145965605|gb|EDK30853.1| Secretion protein, HlyD family [Vibrionales bacterium SWAT-3]
          Length = 441

 Score =  319 bits (817), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 68/420 (16%), Positives = 166/420 (39%), Gaps = 7/420 (1%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             +++  LS + I+ +I W+    +E  V   G+++   +V  I+S   G++++  V  G
Sbjct: 15  RSRKLIWLSALLIVSIIGWATWATLEEVVIGEGKVVPSLSVQTIQSLEGGLVQEIMVRQG 74

Query: 76  SQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             +++G PL   ED            +  ++   +  +  E S +   N+  +  E+   
Sbjct: 75  QSVVKGQPLAKLEDTRFKAAFLESAQQADTLLAQQLRLRAELSTVVLNNDAKEWYERVVL 134

Query: 133 SREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             ++ ++D         +K  +   +  +   L+    R+      R+D  N    L + 
Sbjct: 135 VPQDIVVDVSSHPALMNAKANYLERLGQLKSELEEAALRIEQQAQARVDTLNNIQTLESS 194

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L    ++  M+K++    AV++ +L +  R V K   ++  +    +  +   +E   + 
Sbjct: 195 LDIVIRERNMLKDVVASGAVAEVELLKLNRDVVKLKGDIASSRVAAQKQMAAYSESIADH 254

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                ++  ++   L +     A        +    ++  I++P+ GT+      +    
Sbjct: 255 RSIALDFRTKVQGQLNEVTSKIAQLNESQQAIADQLKRTEIVAPVDGTVKEIFVRTIGGV 314

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +  +P+++++P +    + AK++P+ I  V  G  AT++F  Y  +     K  +  + 
Sbjct: 315 VRPGEPIIELIPSNSQLIVEAKISPQDIAFVHTGLDATIKFSAYDFVIYGGLKGEVTYVS 374

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               Q ++      YY   +++ +    ++   +  G    V       T+    + PI 
Sbjct: 375 ADALQTED---GNAYYRAHIQLNEDQQQNSAFSIIPGMQVAVDILTGEKTVLSYWLKPIL 431


>gi|238750867|ref|ZP_04612365.1| HlyD family secretion protein [Yersinia rohdei ATCC 43380]
 gi|238711011|gb|EEQ03231.1| HlyD family secretion protein [Yersinia rohdei ATCC 43380]
          Length = 446

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 72/433 (16%), Positives = 157/433 (36%), Gaps = 15/433 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+ N    L    +L + G IG + W+ L P++  ++  G I+  +N   ++    G IK
Sbjct: 23  LQTNSGRYLSIGGVLVLGGFIGSLLWAGLAPLDKGIAVMGHIIVAENRKVVQPLQGGRIK 82

Query: 69  KFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +  V  G ++ +G  L+T +D       D +  + +S       +  E+  L  +    +
Sbjct: 83  QLHVAEGDEVAEGQLLITLDDTAIRSHRDNLQHQHLSALAQEARLTAEQHDLPAIIFPAE 142

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + +             + +      ++F +   +    +   L ++         LE   
Sbjct: 143 LHQYP-------EQHLVERNIVLQQQLFQHRRQAQLSEVARLLAQITRHESRLDGLETMR 195

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              +      Q+ L  ++ L +    +Q  L   ER        + +N  E   + + I+
Sbjct: 196 GHNQHQFDLFQRQLQGVQLLAKNGHAAQTQLLDMERQSISLRAGIEKNNSEILELHKQIS 255

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E     +     +  E    L + Q+   D   +L + E       I+SP +G ++    
Sbjct: 256 ETEQHISQRREQFKSENREQLAKAQQNTQDLGQRLEMAEFELNNTRIISPASGAVIALAQ 315

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +        + LM++VP+ +     A++    I  V  G    + F  +      + + 
Sbjct: 316 HTIGGVVSSGETLMELVPNGQPLLAEAQLPVSLIDKVVVGLPVDLNFSAFNQSNTPRLQG 375

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            + ++     Q    L  + YY + + I +   +   + +R G   ++       +L   
Sbjct: 376 SVLRVGADRIQHPQTL--EPYYPLTVAIDN---TQTQLPIRPGMSVDIFIRTGERSLLNY 430

Query: 426 IIHPITDNWPKIF 438
           +  P+TD     F
Sbjct: 431 LFKPLTDRLHVAF 443


>gi|70733643|ref|YP_257283.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
 gi|68347942|gb|AAY95548.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
          Length = 455

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 69/426 (16%), Positives = 156/426 (36%), Gaps = 14/426 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L  + P  ++      I   + L+ W+    I+      G+ +    + +I++   GI
Sbjct: 31  KALIEDAPRVIRLTIWGIIAFFLFLVLWANFAVIDEVTKGEGKAIPSSKLQKIQNLEGGI 90

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V+ G  +  G PL+  +D      +   +    ++   ++   + +D        
Sbjct: 91  VSELYVKEGQIVEAGAPLIRLDDTRFQSNVGETETVRLSMLLRVERLSAEVD-------- 142

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E+      E + +  G+  S  S ++      ++  +     ++        +  +K +
Sbjct: 143 -ERELNFPAEAVKEAPGQAASEKS-LYQSRRQQLHDEIGGLQEQLIQKQQELREFTSKQA 200

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             R  L   ++++ M + L  + AVS  ++ + +R   ++  +L             I E
Sbjct: 201 QYRQQLGLQRQEIAMSEPLVAQGAVSPVEVLRLKRAEVETRGQLDATTLAIPRAESAIKE 260

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  + +     +  E    L + +       +    LE    +  + SP+ G +      
Sbjct: 261 VQRKIDETRGKFRSEALTQLNEARTELNKASATGKALEDRVSRTLVTSPVRGIVKQLMVN 320

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    +++IVP      + AK+ P+ I  +  G  A V+F  Y        KA 
Sbjct: 321 TIGGVIQPGSDMVEIVPLDDTLLVEAKIRPQDIAFLHPGQEAVVKFSAYDYTIYGGLKAR 380

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I       ++   T  YY + L+     L   +  + +  G  A V       ++  
Sbjct: 381 LEQIGADTITDEDKKTT--YYMIKLRTDRSHLGTDEKPLLIIPGMVASVDIITGKKSILS 438

Query: 425 EIIHPI 430
            ++ PI
Sbjct: 439 YLLKPI 444


>gi|37524659|ref|NP_928003.1| membrane fusion protein PrtC [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784084|emb|CAE12953.1| Membrane Fusion Protein PrtC [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 444

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 73/429 (17%), Positives = 178/429 (41%), Gaps = 13/429 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L       L+    +  +GI+G + W+ L P++  V+SSG ++ + N   +++P SGII 
Sbjct: 17  LPLEERHFLRLGWFVIGVGILGFLIWAALAPLDKGVASSGVVVVDGNRKTVQAPASGIIS 76

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYD 125
           + +V  G  +  G  L+    ++    +D  +  +         +  E+   + L     
Sbjct: 77  QIKVVEGETVKAGQTLVQLSQVQAKAQVDALQDQLHTTLATEARLLAEQHGDEALIFPDL 136

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + +   E R  ++++   +   +  +V    ++ + +S++    +++ +  + L+   + 
Sbjct: 137 LQQLHSEPRVNEIIELQKQLFVSRREVLRSDLAGLEQSVEGIDFQIKGLKSSFLNKRMQQ 196

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           + L+       + +T +K+L ++    +N   +  R   +    + E       + + + 
Sbjct: 197 AALK-------EQITNLKSLADEGYFPRNRYLELLREQAELNSSIAEMEGRAGQLEKQLQ 249

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E         A+Y +E+   L + Q + ++  +KL   +      +I++P+ GT+V    
Sbjct: 250 ETQQRIIQRKADYQREVRTQLAEVQVSASEYRNKLDTAQFELTHTSIVAPVDGTVVGLNI 309

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           F+        + LM+I+P  +   +  +V       + KG    + F  +   R  K + 
Sbjct: 310 FTQGGVVAPGEKLMEILPDQRAFEVETRVAVNLADKISKGLNVDLMFTAFNQNRTPKVEG 369

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  I     +  +   +Q YY++ + ++         +++R G P EV     + +L  
Sbjct: 370 KVAVISAD--RLVDPATSQPYYQMRVVVSPEGMEKLKGLDIRPGMPVEVFVKTGSRSLLS 427

Query: 425 EIIHPITDN 433
            +  P+ D 
Sbjct: 428 YLFKPLLDR 436


>gi|291286069|ref|YP_003502885.1| type I secretion membrane fusion protein, HlyD family
           [Denitrovibrio acetiphilus DSM 12809]
 gi|290883229|gb|ADD66929.1| type I secretion membrane fusion protein, HlyD family
           [Denitrovibrio acetiphilus DSM 12809]
          Length = 450

 Score =  318 bits (816), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 61/427 (14%), Positives = 143/427 (33%), Gaps = 15/427 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             + +  P  +  +  +        I W+ +  ++      G ++    +  I++   GI
Sbjct: 27  AAVLQKSPVKMSLVLYIIAFLTCASIIWANIAEVDEMTRGMGRVIPSRQIQIIQNLEGGI 86

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+K  V+ G  + +G  L+T +D       +  +     LR  +   ++  +      D 
Sbjct: 87  IEKINVQEGEHVKKGQVLVTIDDTGFGSSYNESRSKEDELRAKLSRLRAESEGSKFNPD- 145

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                      +     +      K++   +      +     R R   +   D   K  
Sbjct: 146 ---------PDVHKNFPELIDEERKLYKTNLERRDSEIATLKERTRQREIELQDARAKLK 196

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L+A      +++ + K +F++  VS+ +  Q ++   ++  ++        ++   I E
Sbjct: 197 NLKASRELILREMRLTKPMFDRGLVSEVEYLQLQQKELENKTDIESLEKSLGSIQSQIIE 256

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                +  +A Y      +L +         +    ++    +  + SP+ GT+      
Sbjct: 257 AKSMIDETYAKYKSVAQEELNETLAELKRVSTTQVAMKDRVNRAQVRSPVDGTVNQLLVN 316

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +    +++IVP      + AK+ P  I  +  G  A V+   Y           
Sbjct: 317 TVGGVVKPGMDILEIVPDDDALLVEAKIKPSDIAFIYPGLRAVVKLTAYDFAIYGGLDGE 376

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQ 424
           +  I       +   + + YY V +K       D+    ++  G            T+ Q
Sbjct: 377 VVHISADTIIDE---KQEHYYLVRIKTDKSYLGDDEDKKDIMVGMTVMADIVTGKKTVMQ 433

Query: 425 EIIHPIT 431
            ++ PI 
Sbjct: 434 YLMKPIL 440


>gi|238794897|ref|ZP_04638496.1| HlyD family secretion protein [Yersinia intermedia ATCC 29909]
 gi|238725772|gb|EEQ17327.1| HlyD family secretion protein [Yersinia intermedia ATCC 29909]
          Length = 452

 Score =  318 bits (816), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 77/430 (17%), Positives = 158/430 (36%), Gaps = 15/430 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N    L    LL I G IG + W+ L P++  ++  G+++  +N   I+    G I++  
Sbjct: 32  NSGYYLSLGGLLVIGGFIGFLLWAGLAPLDKGIAVMGQVVVAENRKVIQPLQGGRIQQLH 91

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  G ++  G  L+T +D       D    + +S       +  E+  +D +     +  
Sbjct: 92  IAEGDEVTVGQLLITMDDSVIRSQRDSLQNQYISALAQEARLTAEQDGVDEITFPQTLFL 151

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              +   E+ +    +      +     I+ +   +     R+  +   R + + +S L 
Sbjct: 152 NPAQPLVERNIILQQQLFHHRRQAQLSEIARLSAQITRHQDRLNGLQAMRRNNQRQSDLF 211

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                  Q+ L  ++ L     V++N L   ER        + ++  + +   + I+E  
Sbjct: 212 -------QRQLQSIQLLARNGHVAKNQLLDMERQAISLHARVEQDTSDIEEAHKLIDETK 264

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
              +     Y  E    L + Q+   +   +L I E   +   I +P++G I+     + 
Sbjct: 265 QHISQRHEQYKSENREQLAKAQQNTQELKQRLNIAEYELDNTRIYAPVSGAIIALAQHTV 324

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  Q LM++VP  +   + A++  + I   K G    + F  +      K    + 
Sbjct: 325 GGVVSSGQTLMELVPRGQPLLVEAQLPVELIDKAKAGLPVDLNFSAFNQSNTPKLYGTVL 384

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +     Q    L  Q YY + + I     S+  + +R G   +V       +L   +  
Sbjct: 385 HVGADRIQHPQTL--QPYYPLTVAID---MSNTELAIRPGMSVDVFIRTGERSLLNYLFK 439

Query: 429 PITDNWPKIF 438
           P+ D     F
Sbjct: 440 PLADRLHVAF 449


>gi|90406969|ref|ZP_01215160.1| HlyD family secretion protein [Psychromonas sp. CNPT3]
 gi|90312011|gb|EAS40105.1| HlyD family secretion protein [Psychromonas sp. CNPT3]
          Length = 457

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 76/441 (17%), Positives = 159/441 (36%), Gaps = 13/441 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +    P+  +          +    W+    ++      G+++   ++  I+
Sbjct: 10  MVDDVYGAILTQAPSVHRYTIWSLAALFVCFFIWAYFAKLDRITRGEGKVIPSSHIQVIQ 69

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI+++  V+ G ++++G  L   +D      +  +   +  LR +I   +S L  +
Sbjct: 70  SLDGGILQELYVKEGMRVIKGQSLARIDDTRFRSDLAQQDREVDALRANIIRLRSELSSI 129

Query: 121 N-------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                        ++K        L            + +N  I+++   + ++  +++ 
Sbjct: 130 LVADVKKWQLQIKIDKRILIFPVDLTKKSPTLIERQQQEYNGRINTLINQIAIQAQQIKQ 189

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 +L +K   L+  L    ++L + + L +KN V   +L + ER       ELR  
Sbjct: 190 RGQEVKELTSKIYTLQTSLKYANRELKLTRPLAKKNIVPLVELLKLERNANDIGGELRAL 249

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              +  +     E   +       Y  E    L + Q  F+        ++    +  I 
Sbjct: 250 RISKPKLQAAFEEAILKRREAALKYRSEARAKLNELQSIFSQITEAQIGVKDKVTKALIT 309

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ GTI      +     +    L++IVP      I AK+ PK I  +  G  A V+  
Sbjct: 310 SPVIGTIKTIHIRTLGGVVKPGDVLLEIVPTEDKLLIEAKILPKDIAFIHLGLRARVKVT 369

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFP 410
            Y   R      ++E I    +Q  +      +Y + ++  D A       N+ +  G  
Sbjct: 370 AYDFTRYGGLDGVVEHISADTTQDKD---GNSFYIIRVRTQDSAIIGKKGENMPIIPGML 426

Query: 411 AEVLFTAKNTTLAQEIIHPIT 431
             V       ++   I++PI 
Sbjct: 427 TTVDVIISKRSVLDYILNPIL 447


>gi|118591593|ref|ZP_01548990.1| putative transport protein [Stappia aggregata IAM 12614]
 gi|118435921|gb|EAV42565.1| putative transport protein [Stappia aggregata IAM 12614]
          Length = 446

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 74/438 (16%), Positives = 167/438 (38%), Gaps = 11/438 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +  + R+         LL ++ I G   WS   P+  +V SSG  +      +++    G
Sbjct: 14  YSAVPRSIFWHTLIGVLLLVVFIGGFAAWSFTAPLAAAVISSGTFVATGQNKQVQHYEGG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           I+K+  V+ G ++ QG P++  ++   +     + LK   ++ +   +  E   LD +  
Sbjct: 74  IVKEILVQEGERVQQGDPIVLLDETVASANERQLGLKLARLEAINARLRAEYLWLDEVEF 133

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +L++        ++       +     F    + +   +++  + + S+        
Sbjct: 134 PKTLLDQKNNKEIATII-------AGQKLSFLGSRTKLMSDIRILESTIESLQHRHDGYR 186

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +   +   LS  +++    K+LFEK  + +  LN  ER + ++  ++       +    
Sbjct: 187 EQHDSMIKQLSILKEEHKGKKHLFEKGLLLKPTLNALERAIAEAEGQIGRLASAMQEANA 246

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + +  ++     A Y +++  DL+  +        +        E+  I +P++GTIV 
Sbjct: 247 QVLQHQEQVKQTRAAYNEKVLDDLQSIEAELDAAREQSRKARNVLERAVIQAPVSGTIVR 306

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               ++    +  + +++I+P      I A ++   I  V  G  AT+R           
Sbjct: 307 MHYHTAGGVIESGKTIVEILPSDAPLIIEALISRTDIDSVHIGQQATIRLSALNQRTTPV 366

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTT 421
            +  ++ +       +     +E Y   + I     +   N     G PAE++      T
Sbjct: 367 LQGQVQYVSADAITDNTTGMMREVYVTRIDIAPGELTRVLNFVPTPGMPAEIMIQTAERT 426

Query: 422 LAQEIIHPITDNWPKIFE 439
             Q +  PI D+  + F 
Sbjct: 427 FMQYLTKPIVDSMSRAFR 444


>gi|227327221|ref|ZP_03831245.1| HlyD family secretion protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 452

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 75/436 (17%), Positives = 155/436 (35%), Gaps = 9/436 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +     L  +    LK    L + G  GL+ W+ + P++  V+ SG ++  DN   ++  
Sbjct: 21  NVAAMPLHTDAGRYLKYGLWLVLAGFGGLLLWAGMAPLDKGVAVSGRVVVADNRKTVQPV 80

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I    V +G  +  G  L T +        D     ++      +        L  
Sbjct: 81  SSGRIASLTVRDGDHVQAGQILATLDQTPAQAQRDNLVTQLQ------EAHAGEARLLAE 134

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           + D+   AF +  EQ      +      ++F    +++ +        +          +
Sbjct: 135 RDDLSTIAFPAPTEQHSTVTQQIQIAQQQLFISRRAALQQERAAMQAAIIGAKAQSQGSQ 194

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +  +       + L  ++ L ++  +++N L   ER   +    + +  + Q  + +
Sbjct: 195 ALLASSQTQFQIISEQLRGLRPLAQEGYIARNRLLDVERQAAQLAGAMAQERNNQVQLQQ 254

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + EL  +       Y KE+   L   QR+  D   +L   E   +   I +P +GT+V 
Sbjct: 255 QVVELEQKIQQRQNEYQKEVRAQLADTQRSMQDLTQRLKTAEYELQHTHIRAPASGTVVG 314

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +        Q LM+IVP  +   I A++  + +  V  G    + F  +      +
Sbjct: 315 LALHTEGGVVNSGQMLMEIVPDGQPLLIDAQLPIELVDRVSNGLPVELLFSAFNQSTTPR 374

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
              ++  I     Q       + YY + + + +        +++R G P E        +
Sbjct: 375 ISGVVALIGAD--QLVEQQTGKPYYALRIHVDEQGKQQLAGLDVRPGMPVEAFIRTGERS 432

Query: 422 LAQEIIHPITDNWPKI 437
           L   +  P++D     
Sbjct: 433 LLNYLFKPLSDRLHLA 448


>gi|209551566|ref|YP_002283483.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537322|gb|ACI57257.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 449

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 77/438 (17%), Positives = 161/438 (36%), Gaps = 11/438 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + ++ R+          +      G   W+   P+  +V + G  +   N   ++    G
Sbjct: 17  YSDVPRSIRMHSIVGLTVLFTSFGGFGFWAATAPLASAVIAQGSFVATGNNKIVQHLEGG 76

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNN 122
           IIK+ +V  G  + +G  LLT +   +     + ++    L      +  E   L     
Sbjct: 77  IIKEMRVSEGDTVREGDILLTLDPTASRSNERMLQLRRLRLEAVVTRLRAEAQGLQEFQL 136

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              V ++A +     ++        + + VF+     +   L +    ++S+        
Sbjct: 137 PAIVTKEAGDPDINAII-------QSQNIVFHSKQIKLEEQLNLIEKNIQSLEYRFAGYT 189

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +       LS   ++      L +   + + DL   ER +  +  ++     E      
Sbjct: 190 GQKESFERQLSLLTEERDSKARLVKVGYMRKTDLLAIERAIADAMGDIARLNGEINESEA 249

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I +   EA +   +  +     LE  +        ++       E+ TI SP++GT+V 
Sbjct: 250 EIAKFRQEAVIAVNSNKQAALDALETAESDLDSVREQMREAAGVLERTTIRSPVSGTVVR 309

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           +   ++       +P+M+I+P      + A+V    I  +++G  A+VR           
Sbjct: 310 SYFHTAGGVITTGKPIMEILPAHVPLILEAQVLRTSIDQLREGEMASVRLTALNRRTTPV 369

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
            +  +  +     +++  L  ++ Y V + I D   +  +N     G PAEVL      T
Sbjct: 370 LEGKVFYVSADSIEENAGLSVKDVYIVRVAIPDSEIARVHNFHPVPGMPAEVLIQTSERT 429

Query: 422 LAQEIIHPITDNWPKIFE 439
             + I  PITD+  + F+
Sbjct: 430 FFEYISKPITDSMSRAFK 447


>gi|212633288|ref|YP_002309813.1| type I secretion membrane fusion protein, HlyD [Shewanella
           piezotolerans WP3]
 gi|212554772|gb|ACJ27226.1| Type I secretion membrane fusion protein, HlyD [Shewanella
           piezotolerans WP3]
          Length = 460

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 68/448 (15%), Positives = 164/448 (36%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   ++  +  + PAS +          +  + W+    ++   +  G+++    +  I+
Sbjct: 12  MVDDVYGAMMTDAPASHRLTIWALSSLAVTFLIWAYFAELDQVTTGMGKVIPSSQIQVIQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSAL 117
           S   GI++   V+ G  + +G PL   +          ++  + +L      + TE +++
Sbjct: 72  SLDGGILQDMYVQEGLIVTKGQPLARIDATRFQSDFAQQEQEVNSLLANVIRLKTELNSI 131

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHS-----TCSKVFNYGISSVYRSLKMKLTRMR 172
              +   D  E+     +  +   L + +         + +   I ++   L+++  +++
Sbjct: 132 TISSIGSDWREQVKILPQALIFPQLLETNEPELTKRQREEYLGRIDNLSNQLEIQARQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +L +K   L        ++L + + L +K  V + +L + +R+V     EL  
Sbjct: 192 QRNQEIQELASKIRTLTTSFQLVSRELELTRPLADKGIVPEVELLKLQRVVNDIQGELSS 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  +   ++E   +       +  +    L + Q   +         +    +  I
Sbjct: 252 LRLLRPKVKSTMDEAILKRRESVLIFAADARAQLNEMQTKLSRMNEAQVGAQDKVSKAEI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ GTI      +     Q    +++IVP      I  K+ PK I  +  G  A V+ 
Sbjct: 312 VSPVNGTIKSVHINTLGGVVQPGVDIIEIVPSEDKLLIETKIVPKDIAFLHPGLPAVVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R      ++E I    +Q +       +Y V ++    + + ++   + +  G 
Sbjct: 372 TAYDFTRYGGLDGVVEHISADTTQDEE---GNSFYIVKVRTEFSSLTKDDGTEMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTSVDVITGQRSVLEYILNPILRAKDTA 456


>gi|110634941|ref|YP_675149.1| HlyD family type I secretion membrane fusion protein [Mesorhizobium
           sp. BNC1]
 gi|110285925|gb|ABG63984.1| type I secretion membrane fusion protein, HlyD family
           [Chelativorans sp. BNC1]
          Length = 444

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 70/443 (15%), Positives = 160/443 (36%), Gaps = 13/443 (2%)

Query: 1   MHHFMW-KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEI 59
           +H   W   + R+         +L  +   G   W++  P+  +V + G  +       +
Sbjct: 7   VHDIEWFSEVPRSIRKQTTFGIILLGVTFGGFGGWALTAPLAAAVIAQGSFVATGQNKIV 66

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSA 116
           +    GIIK+  V  G Q+    PL+  ++         + L++V ++ +   +  +   
Sbjct: 67  QHFEGGIIKEILVNEGDQVKSDQPLILLDETAALAKERELFLRQVRLEAISARLYAQLGG 126

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            D +     + +   +     +L+                ++ V +++     R      
Sbjct: 127 KDEIELPAILADNRMDPEVAPILEAQKLNFEAWKTKLGSEVALVEQNIMALGYRAEGYAK 186

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            R     +  LL+       ++    + L ++  + + ++   +R + ++  E+     E
Sbjct: 187 QREATIIQLGLLK-------EEAEGKEVLLKQGLIRKTEMKAIQRAIAEAEGEIARLAAE 239

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                  +N+   +       Y + +  +L++ Q        +    +   ++ TI +P+
Sbjct: 240 VSETHSQVNKEEQQIIQTKTAYREAVLDELQRIQAELDSVREQSRAAKNVLQRATINAPV 299

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+V     +S    +  + +M+I+P      I A V   +I  VK G  AT+R     
Sbjct: 300 TGTVVRLNYHTSGGVIESGKGIMEILPSDAPLIIEAHVPRNEIDDVKVGQEATIRLISLN 359

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLF 415
                     +  I     + + N   Q++Y   +++     +  +      G PAE+L 
Sbjct: 360 QRTTPVLNGEVFYISADALKGEPNA-PQDFYLARIRLPATEIARVSGFTPTPGMPAEILI 418

Query: 416 TAKNTTLAQEIIHPITDNWPKIF 438
                T    +  PITD+  + F
Sbjct: 419 QTAERTFFSYLTKPITDSMSRAF 441


>gi|91791749|ref|YP_561400.1| Type I secretion membrane fusion protein, HlyD [Shewanella
           denitrificans OS217]
 gi|91713751|gb|ABE53677.1| Type I secretion membrane fusion protein, HlyD [Shewanella
           denitrificans OS217]
          Length = 460

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 71/448 (15%), Positives = 171/448 (38%), Gaps = 14/448 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M + ++  +  + P   + +       ++  I W+    ++   + +G+++    V  I 
Sbjct: 12  MVNDVYGAMLSDAPTGHRLIIWTLTGMMVSFIIWAYFSELDQVTTGTGKVIPSSQVQLID 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   G++++  VE G  + +G PL   +D         ++  +  L+ ++   ++ LD +
Sbjct: 72  SLDGGVLQEIFVEEGVLVTKGQPLARIDDTRFRSDFAQQEQEVYGLQTNVLRMRTELDSI 131

Query: 121 N--------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                     +  ++ K       +L++   +      + +N  + ++   L++ + +++
Sbjct: 132 LISDMSSNWREQVLITKQDLVFPVELIEQEPELVKRQQEEYNGRLDNLSNQLEILVRQIQ 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +L +K + L        ++L + + L +K  V + +L + ER V     EL+ 
Sbjct: 192 QRQQEIEELASKITTLTKSYQLVSRELELTRPLAQKGIVPEVELLKLERTVNDIQGELKT 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  M   ++E   +       Y  ++   L + Q   +              +  I
Sbjct: 252 LRILRPKMKALMDEAILKRREAVFIYAADLRAQLNELQTKLSRMNQAQIGAFDKVSKAVI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+ GTI      +  +  Q  + +++IVP      I  K+ PK I  +  G  A V+ 
Sbjct: 312 TSPVNGTIKTIHINTLGSVVQPGEEIIEIVPSEDQLLIETKIAPKDIAFLHPGLPAIVKV 371

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGF 409
             Y   R    +  +E I    SQ +       +Y + ++  + +   ++   + +  G 
Sbjct: 372 TAYDFTRYGGLQGTVEHISADTSQDEE---GNSFYTIRVRTKESSLIKDDGTQMPIIPGM 428

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              V       ++ + I++PI       
Sbjct: 429 LTSVDVITGKRSILEYILNPILRAKDTA 456


>gi|163734059|ref|ZP_02141500.1| type I secretion membrane fusion protein, HlyD family, putative
           [Roseobacter litoralis Och 149]
 gi|161392595|gb|EDQ16923.1| type I secretion membrane fusion protein, HlyD family, putative
           [Roseobacter litoralis Och 149]
          Length = 437

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 86/437 (19%), Positives = 170/437 (38%), Gaps = 14/437 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +  K   P  +    LL ++G+IG   WS+   I  +V +SG I  E N   ++ P  G+
Sbjct: 9   RAWKATGPLMVGITALLILVGVIG--VWSVQARIAGAVIASGNIEVESNRQVLQHPQGGV 66

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           +    V++G  +  G  +L F+D +      +++ +   I   +  +  E+  LD L   
Sbjct: 67  VGALPVKDGDFVNAGDTVLRFDDTQLRSELAIVEGQLFEILARKARLKAERDGLDALPLT 126

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++ E A E       D +       +++F    +S+ +S +  L ++            
Sbjct: 127 EELAELAAED------DAVQALIDGQAQLFEARATSLQQSSEQILEQIAQAENQIEGATA 180

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + + L       + +LT  + LFEK     + ++  +R   +   E+         +   
Sbjct: 181 QLAALETQRGLIEAELTDSQTLFEKGLAPASRVSSLQREQARLLGEIGSVTSSIAQLRGE 240

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I  L  E     +   +E    L   Q    + + +      T  +  + +P++G I  +
Sbjct: 241 IASLSIERISLTSRLREEAISTLRDLQFQEVELVQRRLSTTDTLSRMELRAPVSGVIYGS 300

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           + F+  +    ++P+M I+P  +   + A+V P  I  V  G  AT+RF  +      + 
Sbjct: 301 RIFALRSVVSPAEPIMYIIPQDQPMVVAARVDPIHIDQVHVGQEATLRFAAFDQRMTPEI 360

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITD-LAFSDNNIELRNGFPAEVLFTAKNTTL 422
              + ++   +   +  +    YYEV L   D  A       L  G P E        + 
Sbjct: 361 IGHVVRMSADVFTDE--VTGMSYYEVKLVPMDGEAEKLGGQVLLPGMPVEAFIKTAERSP 418

Query: 423 AQEIIHPITDNWPKIFE 439
              +  P+TD + + F 
Sbjct: 419 LNYLAKPLTDYFTRAFR 435


>gi|13471139|ref|NP_102708.1| rhizobiocin secretion protein rspE [Mesorhizobium loti MAFF303099]
 gi|14021883|dbj|BAB48494.1| rhizobiocin secretion protein; RspE [Mesorhizobium loti MAFF303099]
          Length = 434

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 55/435 (12%), Positives = 148/435 (34%), Gaps = 13/435 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + R     L       I  + G  + + +  +  +V + G+++ + +V +++ P  G++ 
Sbjct: 7   IDRTIRRYLLGGVAACIFLVGGAGSLAAVTELSGAVIAPGKLVVDSSVKKVQHPTGGVVG 66

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYD 125
                 G  +  G  L+  ++  T   + +    +   +     ++ E+     +     
Sbjct: 67  DILAREGDAVKSGQVLIRLDETVTRANLAIVTKGLDEFEARLARLEAERDDRAGIAFPAS 126

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +  +  +         + +  +    +F +   +          R+  +      L  + 
Sbjct: 127 LTSRRDDP-------AVARAMAGEQSLFEFRRQARAGQKAQLEERIAQLAEEASGLTEQR 179

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +     +     +L  ++ L+ K  VS + +   ER   +   E  +           I 
Sbjct: 180 TAKSREIELIGTELESIRTLWLKKLVSIDRMTALERDAVRLDGEHGQLTASIAQSKGRIA 239

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   +      +   E++ +L   Q   ++ + +    E   ++  I SP  G +     
Sbjct: 240 ETRLQIIQVDQDLRSEVATELRDVQGKISEFVERKVSAEDQLKRIDIRSPQDGVVHQLAV 299

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +        + +M +VP +    + A++ P+ I  +  G    ++   +      +   
Sbjct: 300 HTIGGVISPGEVIMLVVPVADDLTVEARIAPQDIDQLSLGQDVALKLSAFNQRVTPELSG 359

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
           ++ +I   +S  +       +Y V + +          + L  G P E  F   + T+  
Sbjct: 360 VVSEISADLSVDER--SGASFYTVRVSLPRTELKKLKGLTLAPGMPVEAFFATGSRTMLS 417

Query: 425 EIIHPITDNWPKIFE 439
            ++ P+ D   + F 
Sbjct: 418 YLVKPLADQIARAFR 432


>gi|28870493|ref|NP_793112.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|28853741|gb|AAO56807.1| ABC transporter, periplasmic substrate-binding protein [Pseudomonas
           syringae pv. tomato str. DC3000]
          Length = 417

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 67/418 (16%), Positives = 142/418 (33%), Gaps = 9/418 (2%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
            + G      W+ L P++  ++  G ++       ++S   G++ K  V  G  + +G P
Sbjct: 1   MLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQLVKEGEP 60

Query: 84  LLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           L   +  +    +       +          +E+  LD +    +++      + +    
Sbjct: 61  LFRLDQTQVQADVQSLGAQYRMAWASLARWQSERDNLDEVRFPAELIAAG---QGQNPDP 117

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            L        ++F+    ++ R        +    L    +    S L A   S ++ L 
Sbjct: 118 RLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQAESLRQQLR 177

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            ++ L +   +  N L + +R + +    L +N  E   + + I E       +   Y K
Sbjct: 178 NLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQGIVESRLRLQQQREEYQK 237

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E+       Q        +L     + +   IL+P  G  V     +     +  + L++
Sbjct: 238 EVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNMGVHTEGAVVRAGETLLE 297

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           IVP      +  ++  + I  V       + F  +   R  +    +  I     Q +  
Sbjct: 298 IVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVAGEVSLISADQMQDEKT 357

Query: 381 LQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              Q YY +   + D A    N + ++ G PAE+       +L   +  P+ D     
Sbjct: 358 --GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTGERSLLNYLFKPLLDRAGSA 413


>gi|154174251|ref|YP_001408653.1| type I secretion membrane fusion protein, HlyD [Campylobacter
           curvus 525.92]
 gi|112803936|gb|EAU01280.1| type I secretion membrane fusion protein, HlyD [Campylobacter
           curvus 525.92]
          Length = 487

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 70/438 (15%), Positives = 161/438 (36%), Gaps = 20/438 (4%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           + + +    P++ K++       I  LI W+    I+     SG+I+       I++   
Sbjct: 61  LSEAVLAKAPSTSKKILYALSFTIFWLIVWASWAQIDEITRGSGKIIPSGKNQAIQNLEG 120

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLN 121
           GI+    V+ G ++ +   +L  ++   +      K+ +  L      +D E +  +F  
Sbjct: 121 GIVDAIFVKEGDEVKKDQIILRIDNKNFSSSYGESKLRLDELEAKFMRLDAEANDKEF-- 178

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               V ++  ++   + + +    H++  +  +  I  +   +  + + +        +L
Sbjct: 179 ----VYDEKRDANNTKAIKYEISLHNSNLEHLDEQIRILTEQITQRQSEL-------TEL 227

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +NK S  +   +   K+  +M+ +F+K  VS+ +  Q +R V     EL  ++     + 
Sbjct: 228 KNKISQTQNSYNLMLKEKAIMEPIFKKGLVSEVEYIQLQRRVNDLKGELDASVLALPRVE 287

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I E+ ++       +     ++L +     A        L    E+  + SP+ G + 
Sbjct: 288 STIKEVQNKIAEAKLAFKNNAKKELNEVSAEIARISESQISLSDRVERTYVRSPVNGIVS 347

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                + S   +  + + +IVP         KV P  +  ++ G    V+F  Y      
Sbjct: 348 KMMVHTISGVIKPGENIAEIVPLEDKLVAEVKVKPADVAFLRPGLDTIVKFTAYDFSIYG 407

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
             K  + +I      + N    + YY V ++     L   +  + ++ G           
Sbjct: 408 GLKGKVTQISADT--ETNEKTGESYYLVRIETDKNYLGSEEKPLRIKVGMIVSADIITGK 465

Query: 420 TTLAQEIIHPITDNWPKI 437
            T+   ++ PI       
Sbjct: 466 KTILDYLLKPILKAKNNA 483


>gi|194292186|ref|YP_002008093.1| type I protease secretion protein, haemolytica toxin secretion prte
           family (hlyd) [Cupriavidus taiwanensis LMG 19424]
 gi|193226090|emb|CAQ72037.1| Type I protease secretion protein, haemolytica toxin secretion prtE
           family (hlyD) [Cupriavidus taiwanensis LMG 19424]
          Length = 460

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 71/440 (16%), Positives = 151/440 (34%), Gaps = 14/440 (3%)

Query: 4   FMWKNLKRNHPASLKRMTLLS-IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                   + P       L   ++ +I  + W+ L  ++      G+++    V  +++ 
Sbjct: 29  DARDAAALSRPRWFAHWILWCAVVFVIVALGWAALARVDEVTVGEGKVIPSSQVQVVQNL 88

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GI+ +  V  G  + +  PL+  +D   T      +     L   I    +     + 
Sbjct: 89  EGGIVAQILVRPGQVVSKDQPLMRIDDTRFTASYQEGRTKDDALVARIARLSAEAAGTDF 148

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                      R          + +    +F     ++  +L +   +         +  
Sbjct: 149 VASAEGDGDARR----------FVAEERSLFVSRKHALDANLAVLRQQSEQRRQELAEKR 198

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           ++   LR       ++L MM+ +  +  VS  D+ + ER       EL  +      +  
Sbjct: 199 SREQQLRQSHRLVAQELAMMRPMVAQGVVSDVDVLRLERQTNDLRGELDASRLAMPRLEA 258

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              E   + +   A++  E  R+L Q +   A   +  T L+   ++  + +P+AG +  
Sbjct: 259 AYRESQQKLDEASAHFRAEAMRELNQAKAEQAALSATNTALQDRVDRTVVRAPLAGIVKQ 318

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +     Q    L++IVP      + A+V P  I  ++ G  A V+   Y       
Sbjct: 319 LKVNTVGGVVQPGMDLVEIVPLEDTLLVEARVRPADIAFLRPGQPAVVKLSAYDFSVYGG 378

Query: 363 FKAIIEKIDPII-SQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKN 419
           F   +E I     + +    + + YY V ++  D   + +   + +  G  A V      
Sbjct: 379 FAGTVEHISADTLTPERPGERPESYYLVRVRTRDNRPAGSAVQVPILPGMVATVDVLTGQ 438

Query: 420 TTLAQEIIHPITDNWPKIFE 439
            T+   ++ PI       F 
Sbjct: 439 KTVLHYLLKPIIKTRDMAFR 458


>gi|77165292|ref|YP_343817.1| Type I secretion membrane fusion protein, HlyD [Nitrosococcus
           oceani ATCC 19707]
 gi|254433587|ref|ZP_05047095.1| type I secretion membrane fusion protein, HlyD family
           [Nitrosococcus oceani AFC27]
 gi|76883606|gb|ABA58287.1| Type I secretion membrane fusion protein, HlyD [Nitrosococcus
           oceani ATCC 19707]
 gi|207089920|gb|EDZ67191.1| type I secretion membrane fusion protein, HlyD family
           [Nitrosococcus oceani AFC27]
          Length = 455

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 78/426 (18%), Positives = 173/426 (40%), Gaps = 15/426 (3%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
                 ++ ++   G   W++   + ++V ++G +  E     I+    GI+++  V++G
Sbjct: 35  YRWLGMVILLLAFGGFGGWALTADLAVAVVATGAVSVESFKKTIQHLEGGIVEEIWVQDG 94

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFE 132
             +  G+ LL  +       + + ++        R  +  E+     +     +    F 
Sbjct: 95  DHVEAGSTLLILDKTRALSQLQIARMQYLTSGVARMRLLAEQQGAGSIEFSEALRHSHFP 154

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             +E L        +    +F     ++  +L     ++  +      L++   + ++L 
Sbjct: 155 RVKEVL--------AVQKSLFQARREALAETLHGFDEQIVQMEEQIDGLQSMIKVSQSLA 206

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +S + +   +++LF++  VS   L + ER + +   E+ +   E   +   I+E   +  
Sbjct: 207 ASLRVEAKDLRHLFKEGFVSNQRLRELERKILQIQGEVAQYHSEILRLRSKISENQTQKR 266

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           L+   + KE+   L Q Q   A+   +++ L K  ++ TI +P+ GT+V     +     
Sbjct: 267 LKQQEFQKEVGEQLRQAQANIAEAEERMSALNKQVKRTTITAPVTGTVVGMTVHTLGAVI 326

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+M IVP      + A++  + I ++  G  A +RF  +        +  +  I  
Sbjct: 327 HAGDPIMFIVPSGSGFVVEARIPDRDIDNIYAGQYAEIRFSAFNQRLTDVIEGEVVHISA 386

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              + +  +    YY+  +K+T     +  +NI+L  G PAEV+      T A  +  PI
Sbjct: 387 DAFEDE--ITGGRYYKARIKVTAAGKQNMSSNIQLLAGMPAEVMIRTGERTFASYVAKPI 444

Query: 431 TDNWPK 436
            D   +
Sbjct: 445 ADMLAR 450


>gi|190895177|ref|YP_001985470.1| putative toxin secretion protein [Rhizobium etli CIAT 652]
 gi|190700838|gb|ACE94920.1| putative toxin secretion protein [Rhizobium etli CIAT 652]
          Length = 436

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 69/442 (15%), Positives = 163/442 (36%), Gaps = 13/442 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M+    K+L+++    ++      I    G   W+    +  +V + G ++ + N+  ++
Sbjct: 1   MNGGTRKSLQKSLRGHMRFGLCGVISIFGGFAVWAGTTTLASAVVAPGTLVVDGNIKPVQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSAL 117
            P  GI+ +  V  G  +     L+  +        ++ KV+I  L   +  +  E   L
Sbjct: 61  HPNGGIVTEILVREGQVVHSDEVLIRLDATAAKMNYEILKVAINQLYARKARLSAEAMGL 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +    ++  +    + + +++       +  ++F     +     +    ++      
Sbjct: 121 QDVIVPSELAARIAPDKIDDVME-------SERRIFQSRRDAREGQRQQLGEQITQYQEQ 173

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              LE + +     +   +K+L   + L+ K  VS N LN  +R   +   E  + I   
Sbjct: 174 IKGLETQQAAKSQEIGLIEKELEGTRRLYSKGLVSLNRLNSLDRSEARIQGENGQLIASA 233

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +    I+E+  +          ++  +    Q    + + K    +   ++  I +P A
Sbjct: 234 ASAKARISEIRIQLLQIDQELRSQVETEQRDVQSRLDELIEKEVTAQDQLKRVEIRAPTA 293

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+      S       ++ L++IVP      +  ++ P  I  V  G +A +RF  +  
Sbjct: 294 GTVHDLNIHSIGAVVTPAETLLQIVPSQSELVVSVRLAPSMIDQVAVGQSAFLRFSAFDR 353

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFT 416
                    + ++   +           +Y+  + I     +  N+++L  G P E    
Sbjct: 354 NTTPDLNGHVVRVSADLETDAKTNTV--FYKCDIAIPADEVAKLNSLKLLPGMPVESFIR 411

Query: 417 AKNTTLAQEIIHPITDNWPKIF 438
             + ++A     PI D+  ++F
Sbjct: 412 GNDRSVASYFTKPIRDHMARVF 433


>gi|158426291|ref|YP_001527583.1| type I secretion membrane fusion protein [Azorhizobium caulinodans
           ORS 571]
 gi|158333180|dbj|BAF90665.1| type I secretion membrane fusion protein [Azorhizobium caulinodans
           ORS 571]
          Length = 482

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 71/437 (16%), Positives = 165/437 (37%), Gaps = 16/437 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            +K +          L  +       W+ L  I+ ++ ++G +  E     ++    GII
Sbjct: 51  EVKSDMRRVAAIGYGLIFLTFGIGGAWAALANIDSAIIANGVVSVESKRQVVQHLEGGII 110

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKY 124
            +  V++G  +  G  L   +   +       +  +  L+     ++ E++  D +    
Sbjct: 111 VEIDVKDGESVKAGDLLFRLDPTSSQSNYAALRGQLDTLQATEARLEAERAQADTVVFPA 170

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +L +  E     ++       +     F    +S+   + +  +R R        L+ +
Sbjct: 171 ALLARENEPLVRSVI-------ADQRAQFRDRKASLNGQIDILNSRARQGETEIDGLKRE 223

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              L + L   + +LT +++L +K  VS+  L + +R   +    +  N  +       I
Sbjct: 224 REALDSQLFYIEDELTGIRSLSDKGLVSKPRLAELQREKARLQGLVGRNTADAAKAQNTI 283

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN- 303
            E+  +         +++++ + + ++  +D   KL + E   ++  I +P AG +    
Sbjct: 284 GEMKLQIQQLLQKQQEDVAQQMVETRQKISDVTEKLAVSENVLKRVDIRAPRAGVVQNIN 343

Query: 304 -QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT-ATVRFPHYADIREK 361
            + ++     +    L++IVP +    + A+V P  +  +  G T   VRF  +      
Sbjct: 344 PRIYTIGAVVKPGDTLLEIVPQNDELIVDAQVAPTDVDRLHDGITGVEVRFTAFHSRTTP 403

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNT 420
                +  + P     +     Q Y++ ++ +      ++    LR G PAEV+      
Sbjct: 404 LILGELRSVSPDRLVDE--ATKQPYFQAVVAVAKTDIPEDMKARLRPGMPAEVVIGTGER 461

Query: 421 TLAQEIIHPITDNWPKI 437
           T+   +  P+ D   K 
Sbjct: 462 TVLSYLTRPLVDAVTKS 478


>gi|332716185|ref|YP_004443651.1| rhizobiocin secretion protein [Agrobacterium sp. H13-3]
 gi|325062870|gb|ADY66560.1| rhizobiocin secretion protein [Agrobacterium sp. H13-3]
          Length = 437

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 74/435 (17%), Positives = 155/435 (35%), Gaps = 13/435 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + R+    L      S+  + G+  W+    +  +V +SG ++ +  + +++ P  G++ 
Sbjct: 10  VSRSIRKHLLAGLAASVALLAGVGGWAATTNLAGAVVASGHLVVDSYIKKVQHPKGGVVG 69

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYD 125
           +  V  G ++  G  ++  +  +T   + +    +  L      ++ E+  L  L     
Sbjct: 70  EILVSEGGRVKAGDVVMRLDATQTRANLAIVTKRLDELSARMARLEAERDDLPELVFPQA 129

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++ +  +      +        + +++F +  S         + R+         L  + 
Sbjct: 130 LVARKDDPDVASAM-------RSETRLFEFRKSYREGRKAQLVERITQFEHEIEGLRAQE 182

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                 L+  Q ++T  K+L E+  VS   LN  +        E  E I  Q      I 
Sbjct: 183 VAYDNGLAVLQAEITSQKSLREQGIVSVQRLNSLQTQAATFGGERGEKIAYQAQTAGRIT 242

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   +          E+ R+L + Q    + + +    E   ++  I++P +G +     
Sbjct: 243 ETKLQILQIDQELRTEVGRELREIQAQTGEYVERKVAAEDELKRIDIIAPQSGMVHEMAV 302

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +       + P+M IVP      +  ++ PK I  ++ G  A +R   +      + + 
Sbjct: 303 HTVGGVVTPADPIMLIVPDGDELALEVQIVPKDIDQLQVGQKAMLRMTAFNQRVTPELEG 362

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            + +I   I+          YY   + I        N   L  G PAE        T   
Sbjct: 363 HVSRIAADITTDQRT--GLSYYLARISIPVAEREKLNTAPLMPGMPAEAFIQTSERTALS 420

Query: 425 EIIHPITDNWPKIFE 439
            I  P+TD   + F 
Sbjct: 421 YIAKPLTDQINRAFR 435


>gi|32456002|ref|NP_862004.1| rb129 [Ruegeria sp. PR1b]
 gi|22726354|gb|AAN05150.1| RB129 [Ruegeria sp. PR1b]
          Length = 436

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 79/431 (18%), Positives = 161/431 (37%), Gaps = 13/431 (3%)

Query: 16  SLKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            ++R  +   +G+     G+I W     I  +V +SG+I  + N   ++    GI+ +  
Sbjct: 10  PVRRTMIFGFLGVFALLGGVIAWIAFSSISGAVVASGQIEVDRNRQVVQHIDGGIVAEIL 69

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLE 128
           VE G  +  G  LL  +  +    + + +  +      R  ++ E+   D ++   ++L 
Sbjct: 70  VEEGDVVEVGQVLLRLDATDLISQLRITENQLFEMMARRGRLEAERDEADEIHFAPELL- 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              +     + DF+        ++F     SV R +     R   I    L ++ +    
Sbjct: 129 -TLKDTRPDVADFV----QGQLRLFQARRESVEREVAQLDKRASQIKDQILGIQAQQKAT 183

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L   Q++L   + LF++     + +   ER        L E    +      I EL 
Sbjct: 184 REQLDLIQEELNNQQALFDRGLAQASVVVNLERNQADLEGRLGELTASEAQARGRITELE 243

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            EA        +     L   +      M     +    ++  I++P++G +      + 
Sbjct: 244 IEALGLRTQRQETAIGQLRDMRYRERQLMENRRAMRDRLDRMDIVAPVSGVVYGLAVKTP 303

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +  + ++PL+ +VP  +   I A+V P  I  +  G + +VR P     R  +    + 
Sbjct: 304 RSVIRPAEPLLYLVPQDRPLVISAQVAPTDIDQIYVGQSVSVRLPALDQRRTPELFGTVT 363

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           ++     Q D + ++    E+ L   +L        L  G P        + +    +I 
Sbjct: 364 RVSADAFQDDASGRSFYRSEIQLDPGELERLPEGTSLVPGMPVSSFLKTADRSPLAYLIK 423

Query: 429 PITDNWPKIFE 439
           P+TD + + F 
Sbjct: 424 PLTDYFARAFR 434


>gi|322418603|ref|YP_004197826.1| type I secretion membrane fusion protein, HlyD family [Geobacter
           sp. M18]
 gi|320124990|gb|ADW12550.1| type I secretion membrane fusion protein, HlyD family [Geobacter
           sp. M18]
          Length = 453

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 70/422 (16%), Positives = 155/422 (36%), Gaps = 15/422 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P   + +   +++  +  + W+ +  +E S    G+++    +  I++   GI+ +  
Sbjct: 35  QSPRGGRAILWATLLLFVIFVGWAAVSEVEQSTRGEGKVIPASQIQVIQNLEGGILSELH 94

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +G  LL  ++      ++  +      +      ++     ++         
Sbjct: 95  VKVGDTVKKGQLLLKIDETRFVSSLEQSQAKSGAEKAKAARLRAEASGSSSFIPP----- 149

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                   D      ++   +F    + +  SL++K +++        +L  +   L   
Sbjct: 150 -------SDAPAGIAASERALFESRRTELKHSLEVKQSQVEQRQGELRELNTRLRELNQT 202

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            S + K++ + + L  K AVS  +L Q ER   +   E+         +   I+E Y   
Sbjct: 203 YSLYLKEIGITRPLVAKGAVSDMELLQLERKASEMKGEIETIKQSIPRIQSKIDESYSAM 262

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                N+  +   +  +      +E +    L+   ++  + SP+ GT+      +    
Sbjct: 263 KELRLNFSNKAKVEYNEVAAQLGEEAASSMALKDRLDRTLVRSPVNGTVNRILVNTIGGV 322

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q    +++IVP      I  K+ P  I  +K    A V+F  Y        +A +E+I 
Sbjct: 323 IQPGMNIVEIVPTEGTLLIETKIKPADIGFLKPSQKAMVKFSAYDYTIYGGLEARLEQIG 382

Query: 372 PIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                 +   + + YY V L+     L   +  + +  G  A V   A   T+   ++ P
Sbjct: 383 ADSITDEKKER-ESYYLVTLRTDRSYLGTKEKPLPIIPGMVASVDILAGKRTILSYLLKP 441

Query: 430 IT 431
           I 
Sbjct: 442 IL 443


>gi|298528905|ref|ZP_07016308.1| type I secretion membrane fusion protein, HlyD family
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510341|gb|EFI34244.1| type I secretion membrane fusion protein, HlyD family
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 457

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 81/438 (18%), Positives = 174/438 (39%), Gaps = 14/438 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           NL  +    +    L   +   G+  W+    +E +V + G+I+ E    +++    GI+
Sbjct: 26  NLPTSSRNVIIAGLLFVALFFGGIGVWAATANLEGAVIAQGDIIVETYRQQVQHRDGGIV 85

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKY 124
           K  +V  G Q+ +G  L+T +  E     D+ +  +      +  +  E    D +    
Sbjct: 86  KDIKVREGYQVEKGDVLITLDGEEVRAQRDMYRARMDSFLARQARLMAEIQNADSIEWPL 145

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +LE++      + ++   +   +  +  N  I  +   +  + + +          E +
Sbjct: 146 ALLERSHLPDATESMESEEQIFKSRMEAKNSRIELLRAQINTQNSLIHGR-------ERQ 198

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              +   +SS ++++     L E   +   ++ + +R +  +     E   E       I
Sbjct: 199 LQSIEDTISSLEEEIQAKDPLLEGGFIDITEILELQRTLNSNRANKEELTTEIDQAEERI 258

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            EL  E      +Y +E + +L   ++   D   ++   E    +  + +P AG +V  +
Sbjct: 259 KELELEITDLEKSYAQEAASELGDVRQEIVDLREQMRPAEDAARRLNVTAPKAGVVVNLE 318

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +     Q  +PLM+IVP      + AKV P +I  V+KG  A+V    +      K K
Sbjct: 319 VRTEGGVIQGGEPLMEIVPRDTGLIVSAKVDPDKIDDVRKGQDASVMLSAFPRRYTPKVK 378

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTT 421
            ++  +    ++ +   +   YY   +++   +     D+  +L  G PAEV    +  T
Sbjct: 379 GVVTYVAADRTEPEQRDEP-PYYLTYVQLDQQSLKDAIDDPGKLTPGMPAEVYIQTEAQT 437

Query: 422 LAQEIIHPITDNWPKIFE 439
           +   ++ PI D+  + F 
Sbjct: 438 VMSYVLSPIIDSMDRAFR 455


>gi|15889959|ref|NP_355640.1| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
 gi|15157919|gb|AAK88425.1| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
          Length = 437

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 78/409 (19%), Positives = 154/409 (37%), Gaps = 13/409 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    +  +V ++G ++ E N  +I+    GI+ +  V  G ++  G  LL        
Sbjct: 35  WAAFAKLAGAVVATGRVVVEGNSKKIQHLSGGIVSEINVVEGDRVAAGQILLRLSATVVQ 94

Query: 94  DLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + + + ++  L   R  +  E +         D+         +  +D       +  
Sbjct: 95  ANLSIIENTLAQLYSRRARLRAEIAEEPSFTVTEDLTALTSSKSAKTFID-------SEQ 147

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +FN   +++    K   TR   +      L+ +       L+  ++D++    L +K  
Sbjct: 148 NLFNSRRNALIGMKKQLATRKLQLADEARGLDVQVEATENELAIVKEDVSKTDELLKKGL 207

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V+   LN  +R +     +  + I  +   +  ++EL  +      +   E+++DL   +
Sbjct: 208 VTLQRLNLLKRQLSNLEGQQGQYIAARAQTVGKLSELDLQLLQLDEDRKSEVTKDLTSIE 267

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            T A+   +L       ++  I SPIAG I      + +   Q  + LM +VP      I
Sbjct: 268 ATVAEYEERLAATRDQLDRLDIRSPIAGRIYQLSVHNINGVIQPGEVLMLVVPDKDDLAI 327

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A +TP+ I  +  G   TVRF  +         A +  + P +  Q ++     YY + 
Sbjct: 328 EANITPRDIDQIYVGQPVTVRFTAFNQSTTPDLSAEVAVVAPDL--QTDSRTGTSYYVLR 385

Query: 391 LKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           ++            +L  G PAEV       ++    + P  D   K F
Sbjct: 386 IRPNKAGMGHLPGGKLYPGMPAEVFIQTSERSVLSYFVKPFQDRLKKTF 434


>gi|152996835|ref|YP_001341670.1| HlyD family type I secretion membrane fusion protein [Marinomonas
           sp. MWYL1]
 gi|150837759|gb|ABR71735.1| type I secretion membrane fusion protein, HlyD family [Marinomonas
           sp. MWYL1]
          Length = 443

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 74/427 (17%), Positives = 154/427 (36%), Gaps = 15/427 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L    P   + +  +  I +   + W+    ++      G+++    V +I++   GI
Sbjct: 20  AALMLKTPRGGRIILWVIFIFVAAALVWANYTALDEVTVGEGKVIPSSQVQQIQNLEGGI 79

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K+   + G  +  G  L+T E+ E    +  ++    NL+      ++    L  K+D 
Sbjct: 80  LKEINAKVGQVVDSGQVLMTIENTEALSSLREQQAESINLKVRATRLQAESYGLEPKFD- 138

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                     +++            ++N  + S+  +      ++       ++L+ K  
Sbjct: 139 ---------PEIMKDYPLVVKRELDLYNNRLESLRTNQVGFQQQIEQKKQEIVELQAKLE 189

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L+   +  +++L + +  FE+ AVS+ +L Q ER V +   +L             + E
Sbjct: 190 NLKQSYAFSKEELALTRPAFEQGAVSRVELLQLERQVNQLQGDLEATQLAIPRARSALKE 249

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              + +   A +  +   DL   +            LE    +  + SP+ G +   Q  
Sbjct: 250 AQSKLSEGEAKFRADAQEDLTGVKSKLDQLRESNVSLEDKVSRTQVRSPVKGIVKQIQIN 309

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +    L++IVP      I AKV P+ I  +K   +A V+   Y          +
Sbjct: 310 TVGGVIKPGMNLLEIVPIEDSLLIEAKVRPENIGFIKPDLSAVVKLSAYDFAIFGGLHGV 369

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQ 424
           +E I       +       +Y V ++         N  + +  G  A V       TL  
Sbjct: 370 VENISADTILDEE---GNSFYLVRVRTDKNYLGTKNAPLPIIPGMQATVDIITGKKTLLD 426

Query: 425 EIIHPIT 431
            ++ PI 
Sbjct: 427 YLLKPIL 433


>gi|4973025|gb|AAD34891.1|AF141932_2 rhizobiocin secretion protein RspE [Rhizobium leguminosarum bv.
           trifolii]
          Length = 436

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 68/409 (16%), Positives = 146/409 (35%), Gaps = 13/409 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +  +V +SG ++ +  V  ++    G + +  V+NG  +  G  L+  +D +T  
Sbjct: 35  AATTRLSGAVIASGTVVVDSYVKPVQHQKGGTVGQIFVKNGDLVEAGQVLIHLDDTQTRA 94

Query: 95  LIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            + + +  +  L      ++ E+   D +    D L KA + +       + +      +
Sbjct: 95  NLAIVRKRLDELSARTARLEAERDGADTVEFSKDFLAKANDPQ-------VSRSIEGEKR 147

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F    SS          R+  +      L  + +  R  +   +K+L  ++ LF++  V
Sbjct: 148 LFADRRSSRMSRKAQLRERIEQLKQETEGLVAQETGKRQEIGLIEKELESLQRLFDQGLV 207

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             N +   +R     T EL   +  +      I E   +      +   E+S  L Q + 
Sbjct: 208 PANRVYALQREAANLTGELGSLLANEAQAKGRITETELQIIQIDDDLRSEVSDQLRQAES 267

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
              +   +L   E   ++  + +   G +      +        + +M+IVP        
Sbjct: 268 DIGEFSERLVAAEDDLKRIDVRASQGGVVHQLAVHAPGAVIAPGEAIMQIVPDRDALLAE 327

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            K++P  I  V  G T  +RF  ++     +   ++  I   ++          YY V  
Sbjct: 328 VKLSPTDIDQVTIGQTVHLRFSAFSQRSTPELNGVVAGIAADLTADQR--SGLSYYVVRA 385

Query: 392 KITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +++D  +     +    G P E        T    +  P  D   + F+
Sbjct: 386 EVSDGEWQRLGQVTPVPGMPVEAFIQTGERTALAYLTKPFMDQVARAFK 434


>gi|255322853|ref|ZP_05363994.1| auxiliary transport protein, membrane fusion protein family
           [Campylobacter showae RM3277]
 gi|255300064|gb|EET79340.1| auxiliary transport protein, membrane fusion protein family
           [Campylobacter showae RM3277]
          Length = 427

 Score =  316 bits (810), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 60/436 (13%), Positives = 158/436 (36%), Gaps = 19/436 (4%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + +N   ++     +  + +     W  + P+  +  + G+I    N   I+    G++ 
Sbjct: 2   ILKNEKGTVNFGLFVIFLLVGVFGIWLGMAPLNSAAVAVGKIGVVSNKKIIQHLEGGVVD 61

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYD 125
           K  V++G  + +G PL+  +++     + + +        +   ++ +K     +    +
Sbjct: 62  KIFVKDGDMVKEGAPLVEIKNVALQSEMSVVRAEFLRTSVIVSRLEAQKDDATEVKFSDE 121

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + +          ++   +       +FN     +     +   R++ +           
Sbjct: 122 IKQ----------IEGYKEAIDGQLSIFNAQKKLLDEEKSILKQRIKQLENQIKGANAIV 171

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           S  +  + S  +++   + LF++    +  L    R       E+     E   +   + 
Sbjct: 172 SAKQDRIKSLNEEIKEWERLFKEQLADKVRLRDLNREKTAVEGEIAAGKAEIARLNVQVT 231

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   +  L    + +++ + LE  +    D   +   L+   E+  + SP+ G++V    
Sbjct: 232 ETQAQIILRDRTFKEDVLKKLEDAKTRLVDLQQRYNALKDQSERTIVKSPVEGSVVELAF 291

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  + +M IVP      + A++    I  V  G  A +RF  +        + 
Sbjct: 292 HTIGGVIRPGERIMSIVPDETDYVVEARLNVVDIDTVHVGQLADIRFSAFQHRPSFVMEG 351

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTL 422
            +  +     Q +       +Y++  ++T+        N+  +  G P EV+    + T+
Sbjct: 352 KVTYVSADSIQDN---AGHSFYDIKAELTEEGMKEFKRNDFFIVPGMPVEVMIKTGDRTM 408

Query: 423 AQEIIHPITDNWPKIF 438
            + ++ P  D + + F
Sbjct: 409 LEYVLKPFIDMFKRAF 424


>gi|253687800|ref|YP_003016990.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754378|gb|ACT12454.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 452

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 75/436 (17%), Positives = 157/436 (36%), Gaps = 9/436 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +     L  +    LK    L +IG  GL+ W+ + P++  V+ SG ++  DN   ++  
Sbjct: 21  NVAAMPLHTDAGRYLKHGLWLVLIGFGGLLLWAGMAPLDKGVAVSGRVIVADNRKAVQPV 80

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I    V +G ++  G  L T +        D     ++      +        L  
Sbjct: 81  SSGRIASLTVRDGDRVQAGQVLATLDQTPAQAQRDNLVTQLQ------EAHAGEARLLAE 134

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           + D+   AF +  EQ      +      ++F    +++ +        +          +
Sbjct: 135 RDDLSTIAFPAPTEQHSTVTQQIQIAQQQLFISRRAALQQERTAMQAAIIGAKAQSQGSQ 194

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +  +       + L  ++ L ++  +++N L   ER   +    + +  + Q  + +
Sbjct: 195 ALLASSQTQFQIISEQLRGLRPLAQEGYIARNRLLDVERQAAQLAGAIAQERNNQVQLQQ 254

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + EL  +       Y KE+   L   QR+  D   +L   E   +   I +P +GT+V 
Sbjct: 255 QVVELEQKIQQRQNEYQKEVRAQLADTQRSIQDLTQRLKTAEYELQHTHIRAPASGTVVG 314

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +        Q LM+IVP  +   I A++  + +  V  G    + F  +      +
Sbjct: 315 LALHTEGGVVNSGQMLMEIVPDGQPLLIDAQLPIELVDRVSNGLPVELLFSAFNQSTTPR 374

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
              ++  I     Q       + YY + + + +        +++R G P +        +
Sbjct: 375 ISGVVALIGAD--QLVEQQTGKPYYALRIHVDEQGKQQLAGLDVRPGMPVQAFIRTGERS 432

Query: 422 LAQEIIHPITDNWPKI 437
           L   +  P++D     
Sbjct: 433 LLNYLFKPLSDRLHLA 448


>gi|227114860|ref|ZP_03828516.1| HlyD family secretion protein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 452

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 74/439 (16%), Positives = 156/439 (35%), Gaps = 15/439 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +     L  +    LK    L + G  GL+ W+ + P++  V+ SG ++  DN   ++  
Sbjct: 21  NVAAMPLHTDAGRYLKYGLWLVLAGFGGLLLWAGMAPLDKGVAVSGRVVVADNRKVVQPV 80

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDF 119
            SG I    V +G ++  G  L T +        D     ++        +  E+  L+ 
Sbjct: 81  SSGRIASLTVRDGDRVQAGQVLATLDQTPAQAQRDNLTTQLQEAFAGEARLLAERDDLNT 140

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +         AF +  EQ      +      ++F    +++ +        +        
Sbjct: 141 I---------AFPAPTEQHSTVTQQIQIAQQQLFISRRAALQQERAAIQAAIIGAKAQSQ 191

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             +   +  +       + L  ++ L ++  +++N L   ER   +    + +  + Q  
Sbjct: 192 GSQALLASSQTQYQIISEQLRGLRPLAQEGYIARNRLLDVERQAAQLAGAIAQERNNQVQ 251

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + + EL  +       Y KE+   L   QR+  D   +L   E   +   I +P +GT
Sbjct: 252 LQQQVVELEQKIQQRQNEYQKEVRAQLADTQRSIQDLTQRLKTAEYELQHTHIRAPASGT 311

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +V     +        Q LM+IVP  +   I A++  + +  V  G    + F  +    
Sbjct: 312 VVGLALHTEGGVVNSGQMLMEIVPEGQPLLIDAQLPIELVDRVSNGLPVELLFSAFNQST 371

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
                 ++  I     Q       + YY + + + +        +++R G P +      
Sbjct: 372 TPHISGVVALIGAD--QLVEQQTGKPYYALRIHVDEQGKQQLAGLDVRPGMPVQAFIRTG 429

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P++D     
Sbjct: 430 ERSLLNYLFKPLSDRLHLA 448


>gi|152991144|ref|YP_001356866.1| type I secretion system membrane fusion protein [Nitratiruptor sp.
           SB155-2]
 gi|151423005|dbj|BAF70509.1| type I secretion system membrane fusion protein [Nitratiruptor sp.
           SB155-2]
          Length = 428

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 82/442 (18%), Positives = 180/442 (40%), Gaps = 24/442 (5%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             + + L   H +    + +  I G+ G+  W+    I++SV++ GE++ +     +  P
Sbjct: 2   EDLNQKLTHKHVSRFGILIIFLIFGLFGI--WAAFAKIDLSVNAPGEVIVQSYKKTVMHP 59

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDF 119
             GI+    V  G ++ +G  L+  +  +  + +   + +   +   +  I+ E      
Sbjct: 60  KGGIVSNIDVHEGDEVQKGQTLIQLDVNQLKERLGEAESNYQHLLAQKARIEAELHDKKH 119

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    D+ E                     S +F    +++   L     +++ +     
Sbjct: 120 IQFPNDISED---------------IKKAESTIFQNRRTNLKNRLDDLKYQIKELKEAIK 164

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             +      + LL S++++L   +NLF++  V +  +   +R + +   ++     + K 
Sbjct: 165 SYQTSLEYKQKLLDSYKQELQKWQNLFKEGLVDELKIYDLKRKIDQVQDDIETLQSQIKQ 224

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               I EL ++  L  + Y KE+   L++++   A   SK+ I +   E+ +I +P  G 
Sbjct: 225 KKATIEELQNKMKLIVSEYKKELLDTLKKDEMQLASLKSKIAIYKDEIEKSSIKAPDRGV 284

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +V  Q  SS      ++P++ +VP ++   I AK++P  I  V  G  A + F  Y D  
Sbjct: 285 VVDMQVHSSGEVILPNRPILYVVPKNEKLIIEAKISPMDIDKVHVGQKAEIHFASYVDPS 344

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFT 416
            K     +  +   + +   + + Q YY+ +++IT        +N  ++  G P  V   
Sbjct: 345 AKPVYGKVIYVSADVIKDPKDPRIQ-YYKALIEITPDGMRAIKENGFKVMPGMPVTVFIK 403

Query: 417 AKNTTLAQEIIHPITDNWPKIF 438
           A   +    ++ P+       F
Sbjct: 404 AGQRSFISYLLMPLEQLLKGAF 425


>gi|227823530|ref|YP_002827503.1| putative secretion protein Type I [Sinorhizobium fredii NGR234]
 gi|227342532|gb|ACP26750.1| putative secretion protein Type I [Sinorhizobium fredii NGR234]
          Length = 445

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 69/437 (15%), Positives = 149/437 (34%), Gaps = 11/437 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +  + R+          L  +   G   WS   P+  +V + G  +       I+    G
Sbjct: 13  YAEVPRSIWKQTIAGVALMAVTFGGFGVWSFTAPLAAAVIAQGSFVATGQNKIIQHLEGG 72

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNN 122
           IIK   V  G  I+   PL+  ++           L++  ++ +   +  +    D +  
Sbjct: 73  IIKDILVSEGDHIVADQPLMRLDETAALANQRQLFLRRARLEAIVARLMAQIEGTDKIEL 132

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +     +   E ++        +    F    S +   + +    +          +
Sbjct: 133 PAILAPHMQDPEVEPII-------RSQELNFRAWKSKLDSEIGLYKQNIEGFRFRVEGYQ 185

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +   +R   +  Q++    K+L +K+ + + ++   +R +  +  ++     E      
Sbjct: 186 QQRDAVRQQHALLQEEYVGKKSLLDKDLIRKTEIKSIQRAIADAEGQVGRLTAEISETGA 245

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + +   +       Y +    +L++ +        +L        + TI +P++GT+V 
Sbjct: 246 QVLKQEQQIRQTEETYREAALEELQKVEAELDSVREQLIGAASVLRRATINAPVSGTVVR 305

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               ++    +  +P+M+I+P      I A+V   QI  VK G  ATVR           
Sbjct: 306 LYYHTAGGVVETGKPIMEILPSDVPLIIEAQVIRTQIDSVKIGQKATVRLTALNQRTTPV 365

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
               +  +            TQE Y   + +     +  +      G PAE+L      T
Sbjct: 366 LNGEVYYVSADSVPDPATNGTQEVYLARVSLPVSEVTRISGFVPTPGMPAEILIQTAERT 425

Query: 422 LAQEIIHPITDNWPKIF 438
               +  PI D+  + F
Sbjct: 426 FFDYLTKPIRDSMARAF 442


>gi|90581645|ref|ZP_01237435.1| putative RTX transport protein [Vibrio angustum S14]
 gi|90437175|gb|EAS62376.1| putative RTX transport protein [Vibrio angustum S14]
          Length = 439

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 85/440 (19%), Positives = 173/440 (39%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
            +  W N  + H    +++  L  + +I +ITW+    +E  V   G+++    + +I+S
Sbjct: 3   SNLKWAN--QKHAYRSRKIVWLCSLLVISIITWAAYSKLEEVVVGDGKVVPTLAIQKIQS 60

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL- 120
              GII++  V+ G Q+ +G PL+  +D              + L+  I   K+ LD + 
Sbjct: 61  LEGGIIEQVLVKAGEQVKKGQPLIILDDTRFRTAFQESDEHYRTLQAQIKRLKAELDTVK 120

Query: 121 --NNKYDVLEKAFESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLN 177
               + D  ++   S +    D L K     +K  +N  I  +   L+     +      
Sbjct: 121 VNTKEKDWKKQITISHQAIAFDDLSKRAQLNAKANYNERIGQIESQLEEAQLTIEQQTEA 180

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             D ++ +S L + L    K+  M++   ++ AV++ +L Q  R   K   E+  +   Q
Sbjct: 181 LRDAKSNTSTLYSSLRLVNKEAKMLEGAVKRGAVAEVELIQTRRDQVKLRGEIASSKVAQ 240

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +     + E           +   +   L +    FA        L    ++  I +P+ 
Sbjct: 241 QKASAALREAIVMRRNLALEFRTSVQAQLNELTNQFAQLEDSQEGLADQLKRTEITAPMD 300

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GTI      S     +  +P+M++VP+     + A+++P+ I  V+ G  AT++F  Y  
Sbjct: 301 GTIKDILVRSLGGVVKPGEPIMELVPNDSKLIVEARISPQDIAFVQTGLEATIKFTAYDF 360

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +     K  +  +     Q ++      YY   +++ D    +  +++  G  A V    
Sbjct: 361 VVYGGRKGTVTYVSADALQTED---GTAYYRAHIQLHDD--PETRLQVIPGMQAMVDILT 415

Query: 418 KNTTLAQEIIHPITDNWPKI 437
              T+    + P+       
Sbjct: 416 GEKTVLSYWLKPLLRAKASA 435


>gi|254490550|ref|ZP_05103736.1| type I secretion membrane fusion protein, HlyD family [Methylophaga
           thiooxidans DMS010]
 gi|224464294|gb|EEF80557.1| type I secretion membrane fusion protein, HlyD family [Methylophaga
           thiooxydans DMS010]
          Length = 443

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 148/413 (35%), Gaps = 15/413 (3%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
             I    W+ +  ++      G+++    +  I++   GI+ +  +  G  + +G  LL 
Sbjct: 40  FFICAGWWAKVTELDEVTRGEGKVIPSSKIQIIQNLEGGILSEVLIAEGQIVEKGDVLLK 99

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            +D   +      ++    L       ++  D           A      +L++   +  
Sbjct: 100 IDDTRFSSSFRETELKYWELLARSTRLQAEAD----------DAELVLPARLVEEKPELA 149

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           +   ++F      +  ++ +   + R       + ++K + LR       ++L M + L 
Sbjct: 150 AAERRLFQARQRELQSNIDVLQQQARQREQELRETQSKLNKLRTSYELSNQELGMSEPLV 209

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
               +S+ ++ + +R V +   ++         +   ++E+  +       +  E +  L
Sbjct: 210 SVGVISEVEILRLKRTVNELRGDMETTRLAIPRIRSSLSEVKQKIEDAKLRFQSESASQL 269

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            + Q   A     +T  E    +  + +P+ G I      +     Q  + L++IVP   
Sbjct: 270 SEVQSELARTQETVTSAEDRVTRTQVRAPVKGKINRLMINTVGGVIQPGEDLVEIVPVED 329

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A + P  I  ++ G  A V+F  Y         A +E+I       + +   + +
Sbjct: 330 NLLVEAHIRPSDIAFLRPGQNAMVKFTAYDFSIYGGLPATLERISADTITNEED---ESF 386

Query: 387 YEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           Y + L+  +  +  S   +E+  G    V       T+   ++ PI     + 
Sbjct: 387 YIIYLRTKENNIDSSKGPLEIIPGMTVTVDILTGKKTVLDYLLKPILKAKNEA 439


>gi|238798318|ref|ZP_04641802.1| HlyD family secretion protein [Yersinia mollaretii ATCC 43969]
 gi|238717865|gb|EEQ09697.1| HlyD family secretion protein [Yersinia mollaretii ATCC 43969]
          Length = 446

 Score =  315 bits (808), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 75/434 (17%), Positives = 167/434 (38%), Gaps = 15/434 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            L+ +  + L    LL   G IG + W+ L P++  ++  G I+  +N   I+    G I
Sbjct: 22  PLQSDSGSYLSLGGLLIFGGFIGFLLWAGLAPLDKGIAVMGHIVVAENRKVIQPLQGGRI 81

Query: 68  KKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           ++  V  G ++ +G  L+T +D       D +  + +S       +  E+  L  ++   
Sbjct: 82  QQLHVGEGDEVTEGQLLITLDDTAIRSHRDNLQHQYLSALAQESRLIAEQHDLPEIHFPE 141

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +L+   +   E++     +      +     I+ +   +    +R   + + R +    
Sbjct: 142 ALLQDPAQQVVERITVLQQQLFQHRRQAQLSEIARLSAQITRHQSRQSGLQVLRDN---- 197

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +  L   Q+ L  +++L +   V++N L   ER        + ++  +     + I
Sbjct: 198 ---NQQQLDLFQQQLDGVQSLAKNGHVAKNQLLDMERQAISLRTRVEQDASDIAEAYKLI 254

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E     +     Y  E    L + Q++  +   +L++ E   +   I++P++G+I+   
Sbjct: 255 DETEQHISQRHEQYQSENREQLAKAQQSTQELTQRLSVAEYELDNTRIIAPVSGSIIALA 314

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q LM++VP  +   + A++    I     G    + F  +      +  
Sbjct: 315 QHTVGGVVSSGQTLMELVPSGQPLLVEAQLPVALIDKAMVGLPVDLNFSAFNQSTTPRLY 374

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             + +I     Q    L  + YY + + I     +   +++R G   +V       +L  
Sbjct: 375 GSVLRIGADRIQHPQTL--EPYYPLTIAID---TNQTPLKIRPGMSVDVFIRTGERSLLN 429

Query: 425 EIIHPITDNWPKIF 438
            +  P+TD     F
Sbjct: 430 YLFKPLTDRLYVAF 443


>gi|259418615|ref|ZP_05742532.1| type I secretion membrane fusion protein, HlyD family [Silicibacter
           sp. TrichCH4B]
 gi|259344837|gb|EEW56691.1| type I secretion membrane fusion protein, HlyD family [Silicibacter
           sp. TrichCH4B]
          Length = 446

 Score =  315 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 75/438 (17%), Positives = 162/438 (36%), Gaps = 11/438 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           ++ + R+  + ++    L I G+ G   W+ + P+  +V S G  +   +   ++    G
Sbjct: 14  YEEVPRSVKSHVRWGMFLLIFGLGGFGIWAFMAPLAAAVISQGSFVATGSNKIVQHLEGG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           IIK   VE G  ++ G P++  ++     T   + L++V ++ +   I  E    D L  
Sbjct: 74  IIKAILVEEGENVVAGQPIVLLDETSALATQRELFLRQVRLEAMETRILAEFDRKDTLIY 133

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              + E   +     +LD           VFN     +   + +    + ++       E
Sbjct: 134 PPRLEELRADFNVAAMLDGQQI-------VFNAATQQLRNDINLLTQSIEALKDRSSGYE 186

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +    RA L   ++D    + L EK  V + + N   R + ++  E+     +      
Sbjct: 187 KQLIATRAQLEILEEDSAAKEILLEKGLVRKTEYNTLRRALAEAIGEIGRLEAQVDETAS 246

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                  +     A+       +L+  Q        +    E    +  I++P++GT++ 
Sbjct: 247 LSQRYESQITQTIADRQSAALDELQAVQSELESVREQARRAESVLTRTEIVAPVSGTVIR 306

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +     +  + +++I+P  +   I  ++   +I  V+KG  ATV            
Sbjct: 307 LHYHTPGGVVESGKAILEILPTGEPLIIEVQIPRTEIDVVRKGQAATVSLTALNQRTTPT 366

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
            +  +  +        +    QE Y   + +               G PA+++   ++ T
Sbjct: 367 LQGEVFYVSADAILDRSQELPQEIYVARISVPPSELDRVRGFNPTPGMPAQIMIKTQDRT 426

Query: 422 LAQEIIHPITDNWPKIFE 439
             Q +I P+TD+  + F 
Sbjct: 427 FVQYLIKPVTDSMTRAFR 444


>gi|126740838|ref|ZP_01756523.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. SK209-2-6]
 gi|126718134|gb|EBA14851.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. SK209-2-6]
          Length = 438

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 152/442 (34%), Gaps = 9/442 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M        + +    L    +   I IIG   W+    I  +V +SG I  + N   ++
Sbjct: 1   MKPDAKIAREWSARRPLLLGGICLFILIIGFGAWAGFSSISGAVIASGRIEVDRNRQVVQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSAL 117
               GI+   +V+ G  + +G  LL  +  E    +   + +   I   R  ++ E+   
Sbjct: 61  HLDGGIVAGIRVDEGDTVSEGDVLLRLDAKELQSQLAITEGQLFEIMARRGRLEAERDGA 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             ++    + E   +  E      + +      ++F     S  R ++    R   I   
Sbjct: 121 SEISFDAGLQEHLNDRAE------IRELAEGQVRLFKARAESTSREIEQLEKRRVQISDQ 174

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              +  +    R  L+   ++L   + L E+       +    R     + +L E +  +
Sbjct: 175 ITGVLAQQDSSRLQLALIAEELKNQETLLERGLAQAGTVLNLRRTEADLSGQLGELVAAE 234

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 I E+  E      +  +E    L   +    +         +   +  I +P++
Sbjct: 235 AQAQGRITEIDIEILKLGTSQREEAITQLRDLRYQELELSETRRTYLERLARLEITAPVS 294

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +      +  +  + ++P++ ++P  +   I A+V P  I  +  G   T+RF     
Sbjct: 295 GIVYGLAVHTPRSVIRPAEPVLYLIPQDRPLVIAAQVAPTDIDQIFVGQEVTLRFSALDQ 354

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                    + ++     + +    +    E++L   ++A       L  G P E     
Sbjct: 355 RNTPDLFGTVMQVSADAFEDEGTGFSFYRAEILLNEGEMARLPEGAVLIPGMPVESFIRT 414

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
              +    ++ P++D + + F 
Sbjct: 415 AERSPLAYLVKPLSDYFVRAFR 436


>gi|223038831|ref|ZP_03609123.1| acriflavine resistance protein [Campylobacter rectus RM3267]
 gi|222879804|gb|EEF14893.1| acriflavine resistance protein [Campylobacter rectus RM3267]
          Length = 469

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 67/429 (15%), Positives = 159/429 (37%), Gaps = 14/429 (3%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           + + +    P+  +++  +  I +  L+ W+    I+     SG+I+       +++   
Sbjct: 43  LSEAVLAKAPSGSRKILYIVAITVFWLVVWASFAQIDEITRGSGKIIPSGKNQIVQNLEG 102

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GII++  V  G ++ +   LL  +D   + +    K  +  L+       +  +      
Sbjct: 103 GIIEEIYVHAGDEVKKNQILLKIDDKSFSSVYGESKFRLNELQAKYLRLYAESN------ 156

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              ++ F++RE    D+  ++      +++   + +   + +   +++       +LE+K
Sbjct: 157 ---DEEFDTRETGDKDY-DRFVGFEKSLYDTNKARLREQIGILEEQIKQRQSELRELESK 212

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               ++  +  QK+  + + LF K  VS+ +  Q +R V     EL         +   I
Sbjct: 213 IDQTQSSYNLLQKEKQITEPLFRKGLVSEVEYLQLQRRVNDLRGELSAAKLSVPRVQSTI 272

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E+ ++       +     ++  +     +        L    E+  + SP+ G +    
Sbjct: 273 KEVENKITEAKLAFQNSAKKEFNEVSAEISRLNESQVNLSDKVERTLVRSPVDGIVSKLM 332

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             + S   +    + +IVP         KV P  +  +++G  A V+   Y        +
Sbjct: 333 VNTVSGVIKPGMDIAEIVPVEDNLIAEVKVRPADVAFLRQGLKAMVKLTAYDFAIYGGLE 392

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTL 422
             + +I      + N    + YY V +K     L   +  + ++ G  A         T+
Sbjct: 393 GEVTQISADT--ETNEKTGESYYLVRIKTDKNYLGSENKPLRIKVGMIASADIITGKKTV 450

Query: 423 AQEIIHPIT 431
              ++ PI 
Sbjct: 451 FDYLLKPIL 459


>gi|86748763|ref|YP_485259.1| Type I secretion membrane fusion protein, HlyD [Rhodopseudomonas
           palustris HaA2]
 gi|86571791|gb|ABD06348.1| Type I secretion membrane fusion protein, HlyD [Rhodopseudomonas
           palustris HaA2]
          Length = 445

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 78/437 (17%), Positives = 167/437 (38%), Gaps = 14/437 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           LK      +   T++  + +  +  WS+  P+  +  +SG +  + +   ++    GI++
Sbjct: 13  LKSQLRPVVWGATVVIGVFLFAMTAWSVGAPMSSAAIASGVVSPDGSRKTLQHLEGGIVR 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALDFLNNKYD 125
           +  V  G  +  G  L+  +  +       K+   + ++ +R   ++    L+ +     
Sbjct: 73  ELLVREGDHVQAGQVLMRLDLTQARANFTAKRDEWLRLQAIRARYESHGLNLEEMRIPQV 132

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +L+   E            +     K+F      V     +   +++ I         + 
Sbjct: 133 LLDDKSEE--------FTAFIENEKKLFEGRRLEVIAREDIYNQQIKQIEAEINGKHLER 184

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             L  +     +++     L  +N V + ++   +R   + T ++  N+ +     + I 
Sbjct: 185 EGLDKMRGFINEEIGDKSGLLLQNLVRKPEVLALQRTEAELTSKIGVNLSDIGRAEQKIK 244

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E+          +  E S  L +  R  A     LT       +  +++P++GT++  + 
Sbjct: 245 EVLLAMRAVQTKFRDENSEQLMKVTRDIAQIEGSLTNTGDILSRTDLIAPVSGTVLQLRF 304

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +    ++ IVP   +  I AK++P  I  V+ G  A V F  Y   R   F+ 
Sbjct: 305 KTVGGVVKAGDQILDIVPDDDVLVIDAKLSPTDIDVVRVGMPAQVHFDAYVSRRTPMFEG 364

Query: 366 IIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
           ++  +  D I+ Q   N   Q YY+V ++I         +I L  G PAE        TL
Sbjct: 365 VVNHVSSDAIVDQAAANALQQRYYQVKVQIDRKQIDQYKHITLVPGMPAEAFIMTGTRTL 424

Query: 423 AQEIIHPITDNWPKIFE 439
            + +  PI  ++ + F 
Sbjct: 425 FEYLTAPILTSFRRAFR 441


>gi|87118808|ref|ZP_01074707.1| putative toxin secretion transmembrane protein [Marinomonas sp.
           MED121]
 gi|86166442|gb|EAQ67708.1| putative toxin secretion transmembrane protein [Marinomonas sp.
           MED121]
          Length = 441

 Score =  315 bits (807), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 57/425 (13%), Positives = 154/425 (36%), Gaps = 7/425 (1%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S+    L+ ++ + G   W+ +  +  ++ +SG +  +     ++    GI+ +  V  G
Sbjct: 21  SIIAGILIILVMLGGFGAWATMANLSGAILASGVVTLDSKRKTVQHLEGGIVAEILVSEG 80

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++ +G  L+  +D      +   +  I      +   +S  +            F++R 
Sbjct: 81  EKVDRGQLLVKLDDTRAAANLANIEAQIDVFLARLARLRSEQNLAMEIS--FNHIFKARR 138

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +    + +     + +F     S+   + ++  +          LE + +  + + +  
Sbjct: 139 YE--PVVVEMIEGQTALFKARRESLEGEITLQTQKKVQYLEQIQGLEAQIAASKKIEAIS 196

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            ++L   + L++   ++   +   E+ +     ++ E      +    I E         
Sbjct: 197 AEELVTTRKLYDNGNLTLQPVLDLEKSLAHLKGQIGEYQANIASARAGIAESDLRVLQLR 256

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            ++ + +  +L   Q    +   +  +      +  I +P  G I+     +        
Sbjct: 257 IDFREAVESELLDVQAKIFELREQRIMANYEHNRVEIRAPKGGKIMDLGIHTIGGVLSPG 316

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q ++ IVP      + A++  + I  +    TA VR   ++     +   ++  +     
Sbjct: 317 QAILDIVPEEDELIVEARLQTQDIDKISMNQTAVVRMSAFSSRTTPELNGLVSGVSADSF 376

Query: 376 QQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
             + N     +Y++ ++I        N + L  G PAEV    +  T+   ++ P++D+ 
Sbjct: 377 IDETN--GMSFYKLRIRIPQDEMEKLNELVLMPGMPAEVFVQTEARTMVSYLMKPLSDSA 434

Query: 435 PKIFE 439
            + F 
Sbjct: 435 LRAFR 439


>gi|163795078|ref|ZP_02189046.1| Type I secretion membrane fusion protein, HlyD [alpha
           proteobacterium BAL199]
 gi|159179476|gb|EDP64005.1| Type I secretion membrane fusion protein, HlyD [alpha
           proteobacterium BAL199]
          Length = 450

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 73/432 (16%), Positives = 160/432 (37%), Gaps = 17/432 (3%)

Query: 13  HPASLKRMTLL----SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +P   + +  L      +       W+ L P+E    + G++    N   ++    G+IK
Sbjct: 25  NPIGWRGVLWLGYGIVFLFFGLFGLWAALAPLESGAVAQGQVQVVGNQRVVQHLEGGLIK 84

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +  V  G ++ +G PL+  +        D    + ++       +  E++    +    +
Sbjct: 85  QILVREGERVKKGQPLVVLDGTRARTQFDRVHQQYLAALGREARLLAERTDTPVIKFPEE 144

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++  A +     +LD          ++F+   ++V   L +   R+         L  + 
Sbjct: 145 LIRAAGQPGVADILD-------GEQRLFDGRRAAVSSQLSLLDRRIDKAREEITALNAQQ 197

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              R  L+   +++  ++ L+EK    +  L   +R   +    +      +    + ++
Sbjct: 198 RSDRRQLAIINEEIVGVRELYEKGLERKPRLLALQRTEAELEGSIDNRQALKARAGQAVS 257

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   + +    +   EI  DL   Q    D   +LT  +    + TI +P AG +   + 
Sbjct: 258 ETEFQKSGLVESTTAEIETDLRAAQIELEDLRQQLTAAQDALTRTTIDAPEAGKVYGLRF 317

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +          ++ +VP  +   ++ ++ P  I  VK+G  ATVR   +     K    
Sbjct: 318 HTHGGVVAPGDAILNLVPDDEELIVKVQLDPNDIDTVKEGAAATVRLTSFNQRTFKPIDG 377

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            + +I P + Q     +   +YE  +++        N+E+  G PA  +      T+   
Sbjct: 378 TVTQISPDVVQ---PEKGPPFYEARIRLDAEMMKRLNVEIVPGMPAMAIIATGEQTMLDY 434

Query: 426 IIHPITDNWPKI 437
           +I PI  +    
Sbjct: 435 LISPIARSLETA 446


>gi|226940183|ref|YP_002795256.1| HlyD family secretion protein [Laribacter hongkongensis HLHK9]
 gi|226715109|gb|ACO74247.1| probable HlyD family secretion protein [Laribacter hongkongensis
           HLHK9]
          Length = 487

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 57/429 (13%), Positives = 142/429 (33%), Gaps = 13/429 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++   P   +      +  ++  + W+    I+      G+++       ++S   G++ 
Sbjct: 68  MREESPRRPRIFVWSMLGCLLVAVLWAAFAKIDEVSRGEGKVVPSGQNQVLQSLDGGVVT 127

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +     G  + +G  LL  +       +   +     L+      ++  + +  +     
Sbjct: 128 EILARPGQTVKKGELLLKIDSTRFVSNLRENQAQYYALQAKGARLRALANDVPFE----- 182

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                   ++  F         +++      +  S+ +   +M        + + + +  
Sbjct: 183 -----MPAEVTQFAPGIAQQEMELYTSRKMELDASVSIARQQMAQRTQELREAQARRAQA 237

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                   ++L + + L +  AVS+ DL + ER + +   E      +       I+E  
Sbjct: 238 AQSYDLTAQELRVTRPLKDVGAVSEVDLLRLERDLARFRGERDMAGAQIPRTQAAIDEAR 297

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +       +  E S  L +              L+    Q  I SP+ G +    + + 
Sbjct: 298 RKIEEVELAFRNEASTQLTETMGKLNALSEGSVALQDKVRQTEIRSPVRGEVKQLFTNTV 357

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q  + +++IVP      +  +++P+ I  +  G  A VRF  Y        + ++E
Sbjct: 358 GGVVQPGKDIIEIVPLEASLLLETRISPRDIAFLHPGQKAVVRFTAYDFTIYGGMEGVLE 417

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I       +   +   +Y V ++       D  + +  G  A+V       T+   ++ 
Sbjct: 418 TIGADTITDE---KGNAFYVVKVRTKGATLGDMKLPIIPGMVAQVDIMTGKKTVLSYLLK 474

Query: 429 PITDNWPKI 437
           P+       
Sbjct: 475 PVLRAKATA 483


>gi|253998536|ref|YP_003050599.1| HlyD family type I secretion membrane fusion protein [Methylovorus
           sp. SIP3-4]
 gi|253985215|gb|ACT50072.1| type I secretion membrane fusion protein, HlyD family [Methylovorus
           sp. SIP3-4]
          Length = 442

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 70/429 (16%), Positives = 157/429 (36%), Gaps = 14/429 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +++   ++++ + G   W+ + P+  +V + G+I    N   ++    GI+K+  V +
Sbjct: 22  RIVRKGMFMTVVIVGGFFLWASVAPLSGAVIAEGKIKIATNRKTVQHLEGGIVKQILVRD 81

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAF 131
           G  +  G PLL  ED   +  +++ +     L      +  EK+    +     +L    
Sbjct: 82  GDVVKHGQPLLLLEDTRNSAELNILRDQQDALLAKEARLIAEKTMAGAIVFPQQLLVPMS 141

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             R+E +     ++ S            +   + +    +R         E +   +   
Sbjct: 142 TKRQELINKERAQFLSKR--------KMLNDQIALLREELRHSKAESSAYEAQVKAIEEN 193

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   Q+ L M + L +KN V + D+    + + +   +L     +       ++EL    
Sbjct: 194 IRYRQEQLAMREGLMQKNFVGKADVLNYRQALTEKHEQLAAQSADLNGTRAKVSELELRV 253

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 Y++E   +L+       + + +L   E +  ++T+ +PI G ++  +  +    
Sbjct: 254 IDVKNRYIQEADAELKDTGNQLREVIERLRPAEDSMLRRTVTAPIDGQVMAMKVTTVGGV 313

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               Q +M IVP S    +   V    I  V  G  A V+   Y           +  + 
Sbjct: 314 VTPGQAMMDIVPVSDDLVVEVNVRNLDIDTVYPGQPAEVQLNAYNQRTTPMVTGEVVYVA 373

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
               +          Y   ++I   +  +  ++++  G P       ++ T+ + +I PI
Sbjct: 374 GDAIEDQQTHLLT--YPAHVRIDKESLKNVQHVKIEPGMPVTAFIKTQDRTMLEYLISPI 431

Query: 431 TDNWPKIFE 439
           T      F 
Sbjct: 432 TQRMRHTFR 440


>gi|253996152|ref|YP_003048216.1| HlyD family type I secretion membrane fusion protein [Methylotenera
           mobilis JLW8]
 gi|253982831|gb|ACT47689.1| type I secretion membrane fusion protein, HlyD family
           [Methylotenera mobilis JLW8]
          Length = 470

 Score =  315 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 63/437 (14%), Positives = 151/437 (34%), Gaps = 14/437 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H      +    P   + +       ++ L+ W+    ++  V   G ++    V  I+S
Sbjct: 45  HEEADLVILEQTPIRARLLLYSIAAMLLLLVLWAFFAKVDEVVRGDGRVIPSKQVQVIQS 104

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              GI+ +  V  G  +  GTPL+  ++      +   +             ++  +  +
Sbjct: 105 LDGGIVSEILVSEGEAVAVGTPLIRIDETRAVSSLRENQSQYLAYLAKQYRLRALAEGTS 164

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                         +++   + + +     ++N     +  ++ +   +M       L++
Sbjct: 165 FNPP----------DEVRKQVPETYDQEYALYNSSKDELTSAIAIARDQMVQREKELLEV 214

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +  +      S +++L   K L    AVS+ D+ + ER   K+  ++ +   +   + 
Sbjct: 215 QFRKEIAEKNYESSKRELAANKPLLASGAVSEIDILKLERETNKAKGDIDQARAQIGRIE 274

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I E   + +    N+  ++  +L                L+    Q T+ SP+ G + 
Sbjct: 275 SAIGEAKRKVSEVQQNFQSKVRTELNDITARLNSVSEVSVSLKDKVNQSTLKSPVNGKVS 334

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +     Q  + ++++VP      +  K+  K I  +     A V+   Y      
Sbjct: 335 RLFYNTVGGVIQPGKEVLEVVPTDDALILETKIQIKDIAFISLLQPAVVKLTAYDYTIYG 394

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
              A++E I P     +   +   YY V ++    +     + +  G  A+V       T
Sbjct: 395 ALDAVVENISPDSIVDE---KGNAYYVVRVRTLKSSLG-KGLPIIPGMVAQVDIMTGKKT 450

Query: 422 LAQEIIHPITDNWPKIF 438
           +   ++ P+       F
Sbjct: 451 ILSYLLKPVLKAKSYAF 467


>gi|71908814|ref|YP_286401.1| Type I secretion membrane fusion protein, HlyD [Dechloromonas
           aromatica RCB]
 gi|71848435|gb|AAZ47931.1| Type I secretion membrane fusion protein, HlyD [Dechloromonas
           aromatica RCB]
          Length = 471

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 61/424 (14%), Positives = 144/424 (33%), Gaps = 13/424 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            + R  P   + +     +  I  + W+ +  ++      G ++    +  ++S   G++
Sbjct: 51  AMLRQEPLRARVLLRSISVVFIMFVLWAAIAQLDEVTRGEGRVIPSRQIQILQSIDGGLV 110

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V+ G  +     L+  ++      +   +     L       ++  +         
Sbjct: 111 SEILVKEGEVVQPNQLLIKIDETRFVSSVKENQAQYLGLVAKAARLRAISEGKPF----- 165

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                    ++L           + +      +  ++ +   ++        + + K S 
Sbjct: 166 -----VPPPEVLKADPSIVQQERQFYEARNDELNATVSIARQQLAQRQQELNEAQAKRSQ 220

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                    ++L + K L    AVS+ +L + ER V +   E      +   +   I+E 
Sbjct: 221 ASQGYDLTSRELAVTKPLINSGAVSEVELLRLERDVSRYRGERDMASAQISRVQASIHEA 280

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +       +  + S++L +              L    +Q +I SP+ GT+      +
Sbjct: 281 QRKIEEVELTFRNDASKELSETMAKLNSLAEGSVALSDRVKQSSIRSPVKGTVKRLLVNT 340

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  + +++IVP      + A+V P+ I  ++ G  A V+F  Y           +
Sbjct: 341 VGGVVQPGKDMIEIVPLEDTLLLEARVLPRDIAFLRPGQPAMVKFTAYDFSIYGGLDGTL 400

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
           E I       +   +   +Y V ++     F + N+ +  G  AEV       ++   +I
Sbjct: 401 EHIGADSVIDE---KGNAFYTVRVRTNKPGFGNANLPIIPGMVAEVDILTGKKSVLAYLI 457

Query: 428 HPIT 431
            P+ 
Sbjct: 458 KPVL 461


>gi|330503962|ref|YP_004380831.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           mendocina NK-01]
 gi|328918248|gb|AEB59079.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           mendocina NK-01]
          Length = 452

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 62/426 (14%), Positives = 148/426 (34%), Gaps = 15/426 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            +  + P   +         ++  + W+    +E   +  G+ +    V  I++   GI+
Sbjct: 30  AILEDSPWLSRITVWAVSACLLTALAWAHFAVLEEVTTGEGKAIPSSKVQVIQNLEGGIV 89

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V  G  + +G  LL  +D          +     L   ++   +  +    +    
Sbjct: 90  SEIFVREGQVVDKGDTLLRLDDTRFLSNRGETEADRLALMARLERLSAEAEGREPRLP-- 147

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                   EQ+     +       ++      +    +    ++R       +  +K+  
Sbjct: 148 --------EQIAQGAPQLAEDELALYRSRQQRLQSEQRTLGEQLRQKEQELAEFRSKAQQ 199

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            R+ L   Q++L M + L    A+SQ ++ +  R + +    L             ++E+
Sbjct: 200 YRSSLGLLQEELNMSQPLVASGAISQVEVLRLRRSLVELRGSLEATNLAIPRAEAAMSEI 259

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             + +    ++  +  ++L + +       +    +E    + T+ SP+ G I   +  +
Sbjct: 260 KSKMDESELSFRSDAFKELNEVRTELQKITATSVAIEDKVTRTTVTSPVRGVIKQLKVNT 319

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q    +++IVP      I AKV P+ +  +  G  A V+F  Y        KA +
Sbjct: 320 IGGVVQPGSDMLEIVPLDDSLLIEAKVRPQDVAFLHPGQKAMVKFTAYDYTIYGGLKANL 379

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           E I       +       +Y + ++     L   ++ + +  G  A V       ++   
Sbjct: 380 ELISADTITDEE---GNSFYLIQVRTDKSHLGSDEHPLLIIPGMVATVDIITGEKSVLAY 436

Query: 426 IIHPIT 431
           ++ P+ 
Sbjct: 437 LLKPVL 442


>gi|238760136|ref|ZP_04621284.1| HlyD family secretion protein [Yersinia aldovae ATCC 35236]
 gi|238701634|gb|EEP94203.1| HlyD family secretion protein [Yersinia aldovae ATCC 35236]
          Length = 410

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 74/418 (17%), Positives = 166/418 (39%), Gaps = 15/418 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           + + G +G + W+ L P++  ++  G+++  +N   I+S   G I++  V  G +++ G 
Sbjct: 1   MVLAGFVGFLLWAGLAPLDKGIAVMGKVVVAENRKVIQSLQGGRIQQLHVVEGDEVIAGQ 60

Query: 83  PLLTFEDI---ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            L+T +D       D +  + +S       +  E++ L  ++    +L+    S  E+ +
Sbjct: 61  LLITLDDTVIRNQRDNLQHQYLSALAQETRLAAEQNELAEISFPQILLDHPEHSLVERNI 120

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               +      +     I+ +   +     R++ + + R + + +S L        Q+ L
Sbjct: 121 VLQRQLFQHRRQAQLSEIARLSAQITRYQDRLKGLQVMRSNNQRQSDLF-------QRQL 173

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             ++ L +   V++N L   ER       ++ ++  +     + I+E     +     Y 
Sbjct: 174 QGIQLLAKNGHVAKNQLLDMERQAISLHAQIDQDTSDIAETHKLIDETEQHISQRHEQYQ 233

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E    L + Q++  +   +L+I E   E   + +P++G ++     +        Q LM
Sbjct: 234 SENREQLAKAQQSTQEFAQRLSITEYELENTRLYAPVSGVVIALAQHTIGGVVSTGQTLM 293

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           ++VP  +   I A++  + I  V  G    + F  +      K +  +  +     Q   
Sbjct: 294 ELVPSGQPLLIEAQLPVELIDKVAVGLPVDLNFSAFNQSNTPKLQGSVLHVGADRIQHPQ 353

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
            L  Q YY + + I     +   + +R G   +V       +L   +  P+TD     
Sbjct: 354 TL--QPYYPLTVAID---IAQTALAIRPGMSVDVFIRTGERSLLNYLFKPLTDRLHMA 406


>gi|123440527|ref|YP_001004521.1| HlyD family secretion protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087488|emb|CAL10269.1| HlyD family secretion protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 410

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 157/419 (37%), Gaps = 15/419 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +   G IG + W+ L P++  ++  G I+  +N   ++    G I++  V  G  + QG 
Sbjct: 1   MVCGGFIGSLLWAGLAPLDKGIAVMGHIVVAENRKLVQPLQGGRIQQLHVAEGDDVTQGQ 60

Query: 83  PLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            L+T +D       D +  + +S       +  E+  L  +     +L+   ++  E+  
Sbjct: 61  LLITLDDTALLSHRDNLQNQYLSALAQESRLTAEQHELPTITFPPALLQHPAQALVERNT 120

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               +      +     I+ +   +    +R+  + + R          +      Q+ L
Sbjct: 121 VLQQQLFLHRRQAQLSDIARLSAQITRHESRLDGLQVAR-------GHNQRQFDLFQRQL 173

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             ++ L +   V+Q+ L + ER        + +N  E   + + I E           Y 
Sbjct: 174 QGVQLLAKNGHVAQSQLLEMERQAISLRANIEKNTSEILELHKQIGETEQHILQRREQYK 233

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E    L + Q++  +   +L I E   +   I +P++GT++     +        Q LM
Sbjct: 234 SENREQLAKAQQSTQELEQRLGIAEYELDNTRIYAPVSGTVIALTQHTVGGVVSTGQTLM 293

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           ++VP+ +     A++    I  V  G    + F  +      + +  +  +     Q  N
Sbjct: 294 ELVPNGQPLLAEAQLPVSLIDKVMVGLPVDLNFSAFNQSSTPRLQGSVLHVGADRIQ--N 351

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           +   + YY + + I     +   +E+R G   ++       +L   +  P+TD     F
Sbjct: 352 SHTLEPYYPLTVAID---ITQTELEIRPGMSVDIFIRTGERSLLNYLFKPLTDRLHVAF 407


>gi|121608611|ref|YP_996418.1| HlyD family type I secretion membrane fusion protein
           [Verminephrobacter eiseniae EF01-2]
 gi|121553251|gb|ABM57400.1| type I secretion membrane fusion protein, HlyD family
           [Verminephrobacter eiseniae EF01-2]
          Length = 453

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 78/410 (19%), Positives = 153/410 (37%), Gaps = 13/410 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ L P++  V S G +  +     ++    GI+K+  V  G  +  G PL+  +D    
Sbjct: 51  WATLAPLDEGVPSQGVVTLDTKRKLVQHLTGGIVKQVFVREGDMVQAGQPLIELDDAVAK 110

Query: 94  DLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
              +  +     LR     +  E++    ++   D+   A +    Q + +  +   +  
Sbjct: 111 ANYEAVRQRYLGLRTVQSRLLAEQTGAAKISFHPDLQAAADDPLIRQQMQYQEQLILSRR 170

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 + ++  S++ +   ++S            +  R  L   + +L   + L ++  
Sbjct: 171 AALRADLQAIEESIQGQKALLQS-------YAGMLTSRRGQLGLLEDELRHTRELVKEGY 223

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +N   + ER+V +S L + + +       R I E+  +A      Y KE+   L    
Sbjct: 224 TPRNRQLELERMVAESNLSITDLLGNTMRTQRSIGEMRQKALAREQEYRKEVESMLGDVT 283

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           R    +  K   L+   E+  I SP++G +V     +     Q  Q LM IVP      +
Sbjct: 284 RDVQSDTDKYLALKADLERIEIRSPVSGQVVGLAVQTVGAVIQPGQQLMGIVPPDAPLLL 343

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A + P  I  ++ G  A VRF  +A       +  +  +   +    +      YY   
Sbjct: 344 EAHIAPHLIDKLRPGLHADVRFSAFAHSPHLVVQGELASVSGDLL--TDAQSGVSYYLAR 401

Query: 391 LKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +K+T           L+ G PAEV+      T+   ++ P+        +
Sbjct: 402 IKVTSEGMKTLGQRHLQPGMPAEVVIKTGERTMLTYLLGPLLTRLSHSLK 451


>gi|85716062|ref|ZP_01047038.1| type I secretion membrane fusion protein, HlyD [Nitrobacter sp.
           Nb-311A]
 gi|85697061|gb|EAQ34943.1| type I secretion membrane fusion protein, HlyD [Nitrobacter sp.
           Nb-311A]
          Length = 421

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 67/426 (15%), Positives = 156/426 (36%), Gaps = 14/426 (3%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
            ++    ++G   W    PI  +V +SG  +       I+    G+I + +V  G  +  
Sbjct: 1   MVVIAATVLGFGVWGNTAPIAGAVVASGVFVATGQNKIIQHLEGGMIDEIKVHEGDTVEP 60

Query: 81  GTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           G  L+  +       +    L+   +  +   +  +      +    ++   + + +   
Sbjct: 61  GQILVKLDRTTAKAEMQRLFLRNARLTAVDARLQAQVREESEVRFPPELAADSKDPQIRS 120

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++       +      N  I+ +  S+K    R+    +       + S +R  ++  ++
Sbjct: 121 IVSAQLLAFTAQRNNTNSEIAGIEDSIKALNERIAGSKV-------QLSGVRRQIALVEE 173

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D+   ++L     V + D+   +R       E+   + E  +    I+   ++ N     
Sbjct: 174 DIKTKEHLLAAGLVRKPDVLLLQRNQANLEGEVGRIMGEIGDAKERISRAMEQINGVRKT 233

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            +K     + + +    D   ++   +   ++ TI +P+ G +V  +  +     +  +P
Sbjct: 234 AIKTAVEQMHEVRGELVDVRERMQSAKGVLDRTTIRAPVKGVVVKLRFHTRGGVVEPGKP 293

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +M+++P ++   I A+V P+ I  VK G  A VR    +          +  +       
Sbjct: 294 IMELLPLNEPLIIEARVRPQDIDSVKHGQEAMVRLTALSQRVTPMVSGDVIYLSADTVAD 353

Query: 378 DNNLQ---TQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           +   Q     + Y V +++ +   +         G PAEV       T  Q I+ PI D+
Sbjct: 354 EKKSQQTGPSDIYVVRVRLHNAEVARIPGFHPTPGMPAEVFVKTTERTFFQYIMKPIEDS 413

Query: 434 WPKIFE 439
             + F 
Sbjct: 414 MSRAFR 419


>gi|170740742|ref|YP_001769397.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium sp. 4-46]
 gi|168195016|gb|ACA16963.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium sp. 4-46]
          Length = 420

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 67/421 (15%), Positives = 159/421 (37%), Gaps = 13/421 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           ++ +  +GL  W+    +  +V + G ++ E NV +++    G++ + +V +G+++  G 
Sbjct: 7   VTALLALGLGGWAATTELAGAVIAPGALVVETNVKKVQHLTGGVVGELRVRDGAEVRAGE 66

Query: 83  PLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            L+  ++  T   + +    +      +  +  E+   D +    D++++  E     LL
Sbjct: 67  VLVRLDETITRANLAVITKSQDEFTARQARLKAEQDGRDGVRFPADLVQRRAEPAVTDLL 126

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                      ++F    ++          R+  +      + ++ +  +  +    ++L
Sbjct: 127 -------GEEERLFAIRRTAREGQKAQLRERIGQLREQIQGMADQVTAKQREIRLIGEEL 179

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             ++ LF KN +    +   ER   +   E    +         + E   +      +  
Sbjct: 180 KGVRELFAKNLIQITRVTALERDAARLEGERGALVSAIAQTKGKVTETELQILQVDQDLR 239

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E+ ++L + +   A+ + K    E   ++  I +P  G +      +        +PLM
Sbjct: 240 TEVGKELAEIRGKLAELVEKRVAAEDQLKRVEIRAPQDGVVHQLAVHTVGGVVSPGEPLM 299

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IVP S    + A++ P+ I  V+ G+ A +RF  +      + K  +  +   ISQ   
Sbjct: 300 LIVPRSDALTVEARIQPQDIDQVRLGHRAVLRFSAFNQRTTPELKGEVIVVSADISQDQK 359

Query: 380 NLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                 +Y V ++         + ++L  G P E         +   +  P+ D   K +
Sbjct: 360 T--GASFYTVRIRPAAGELERLDGLKLVAGMPVESFIQTGERMVLSYLTKPLHDQITKAW 417

Query: 439 E 439
            
Sbjct: 418 R 418


>gi|28395577|gb|AAO39141.1| putative type I secretion protein [Photorhabdus luminescens]
          Length = 442

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 75/429 (17%), Positives = 176/429 (41%), Gaps = 13/429 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L       L+   L+  +GI+G + W+ L P++  V+SSG ++ + N   +++P SGII 
Sbjct: 15  LPLEERHFLRLGWLVIGVGILGFLIWAALAPLDKGVASSGVVVVDGNRKTVQAPASGIIS 74

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYD 125
           + +V  G  I  G  L+    ++    +D  +  +         +  E+   + L     
Sbjct: 75  QIKVVEGETIKAGQTLVQLSQVQAKAQVDAIQDQLYTTLATEARLLAEQHGDEVLIFPDI 134

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + +   E R  ++ +   +   +  +V    +  + +S++    +++ +  + L    + 
Sbjct: 135 LQQLQSEPRVNEITELQKQLFKSRREVLRSDLEGLEQSVEGINFQIKGLKSSLLSKRMQQ 194

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             L+       + +T +K+L ++    +N   +  R   +      E       + + + 
Sbjct: 195 GALK-------EQITNLKSLADEGYFPRNRYLELLREQAELNSSTAEMAGRAGQLEKQLQ 247

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E         A+Y +E+   L + Q + ++  +KL   +      +I++P+ GT+V    
Sbjct: 248 ETQQRIIQRKADYQREVRTQLAEVQVSASEYRNKLDTAQFELTHTSIVAPVDGTVVGLNV 307

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           F+        + LM+I+P      + A+V       + KG+   + F  +   R  K + 
Sbjct: 308 FTQGGVVAPGEKLMEILPTQVALEVDARVAVNLADKISKGFDVDLMFTAFNQNRTPKVEG 367

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  +     +  + + +Q YY++ + ++         +++R G P EV     + +L  
Sbjct: 368 KVAMVSAD--RLVDPVTSQPYYQMKVVVSPEGMEKLKGLDIRPGMPVEVFVKTGSRSLLS 425

Query: 425 EIIHPITDN 433
            +  P+ D 
Sbjct: 426 YLFKPLWDR 434


>gi|146306833|ref|YP_001187298.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           mendocina ymp]
 gi|145575034|gb|ABP84566.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           mendocina ymp]
          Length = 452

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 62/426 (14%), Positives = 147/426 (34%), Gaps = 15/426 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            +  + P   +    +    ++  + W+    +E   +  G+ +    V  I++   GI+
Sbjct: 30  AILEDSPWLSRATVWVVSACLLAALVWAHFAVLEEVTTGEGKAIPSSKVQVIQNLEGGIV 89

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V  G  + +G  LL  +D          +     L   ++   +  +    +    
Sbjct: 90  SEIFVREGQVVDKGDTLLRLDDTRFLSNRGETEADRLALIARLERLGAEAEGRAPQLP-- 147

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                   E++     +       ++      +    +    ++R       +  +K+  
Sbjct: 148 --------EEITRDAPQLAEDQLALYRSRQQRLRSEQRTLGEQLRQKEQELAEFRSKAQQ 199

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            R+ L   Q++L M + L    A+S+ ++ +  R V +    L             ++E+
Sbjct: 200 YRSSLGLLQQELNMSQPLVASGAISEVEVLRLRRSVVEVRGSLEATNLAIPRAEAAMSEI 259

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +       +  E  ++L + +       +    ++    + T+ SP+ G I   +  +
Sbjct: 260 KSKMEESELAFRAEAFKELNEVRTELQKITATSVAIQDKVTRTTVTSPVRGVIKQLKVNT 319

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q    +++IVP      I AKV P+ +  +  G  A V+F  Y        KA +
Sbjct: 320 IGGVVQPGSDMLEIVPLDDSLLIEAKVRPQDVAFLHPGQKAMVKFTAYDYTIYGGLKANL 379

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           E I       +       +Y + ++     L   +N + +  G  A V       ++   
Sbjct: 380 ELISADTISDEE---GNSFYLIQVRTDKSHLGSEENPLLIIPGMVATVDIITGEKSVLAY 436

Query: 426 IIHPIT 431
           ++ P+ 
Sbjct: 437 LLKPVL 442


>gi|226941834|ref|YP_002796908.1| HlyD family secretion protein [Laribacter hongkongensis HLHK9]
 gi|226716761|gb|ACO75899.1| probable HlyD family secretion protein [Laribacter hongkongensis
           HLHK9]
          Length = 469

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 59/430 (13%), Positives = 144/430 (33%), Gaps = 13/430 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            +    P   +      +   +  + W+ L  ++      G+++       ++S   G++
Sbjct: 49  AILEQKPNRPRVFVWTLLALAVCAVLWAALARVDEVSRGEGKVIPSGQNQHLQSLDGGVV 108

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V+ G  + +G  LL  ++      +   +    +L       ++          + 
Sbjct: 109 SEILVKEGQVVKKGQLLLKVDNTRFVSSLRENQAQYLSLLAKAARLRA----------IT 158

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E+       Q++    +  +    ++      +  S+ +   ++        ++  ++S 
Sbjct: 159 EQTPFEMPAQVIQEAPEVAAQERGLYESSRLELEASVSIARQQLTQRQQELSEVRARASQ 218

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                    K+L + + L +  AVS  DL + ER V +   E  +   +   +   I E 
Sbjct: 219 AAQSYDLTAKELAVTRPLKDVGAVSDVDLMRLERDVARYRGEREQANAQIPKIQAAITEA 278

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +       +  + S +L +              LE       I SP+ G +      +
Sbjct: 279 SRKIEEVELTFRNKASSELSETMSKLNSLSEGSVALEDKVRLSEIRSPVNGEVKRLYLNT 338

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  + +++IVP      +  +++P+ I  +  G  A VR+  Y        +  +
Sbjct: 339 IGGVVQPGKDIVEIVPLDDGLLLETRISPRDIAFLHPGQRAVVRYTAYDYTVYGGMEGEV 398

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
           E I       D   +   +Y V ++       +  + +  G  A+V       T+   ++
Sbjct: 399 ENIGADTITDD---KGNAFYIVKVRTKGSRLGEQKLPIMPGMVAQVDIMTGKKTILSYLL 455

Query: 428 HPITDNWPKI 437
            P+       
Sbjct: 456 KPVLRAKATA 465


>gi|42541025|gb|AAS19412.1| PrtC [Photorhabdus sp. Az29]
          Length = 442

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 71/429 (16%), Positives = 175/429 (40%), Gaps = 13/429 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L       L+   L+  +GI+G + W+ L P++  V+SSG ++ + N   +++P SGII 
Sbjct: 15  LPLEERHFLRLGWLVIGVGILGFLIWAALAPLDKGVASSGVVVVDGNRKTVQAPASGIIS 74

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYD 125
           + +V  G  I  G  L+    ++    +D  +  +         +  E+   + L     
Sbjct: 75  QIKVVEGETIKAGQILVQLSQVQAKAQVDALQDQLHTTLATEARLLAEQHGDETLIFPEI 134

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + +   E R ++++    +  ++  ++    +  + +S++    +++ +  + +    + 
Sbjct: 135 LRQLQSEPRVKEIIVLQKQLFASRREMLQSDLEGLEQSVEGTDFQIKGLKSSLVSKRVQQ 194

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             L+       + +T +K+L ++    +N   +  R   +    + E +     + + + 
Sbjct: 195 VALK-------EQITNLKSLADEGYFPRNRYLELLREQAELNSGIAEMVGRAGQLEKQLQ 247

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E         A+Y +E+   L   Q   ++  +KL   +      +I++P+ GT+V    
Sbjct: 248 ETQQRIIQRKADYQREVRTQLADVQVAASEYRNKLDTAQFELTHTSIVAPVDGTVVGLNV 307

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           F+        + LM+I+P+     +  +V       + KG    + F  +   R  K + 
Sbjct: 308 FTQGGVVAPGEKLMEILPNQMALEVETRVAVNLADKISKGMDVDLMFTAFNQNRTPKIEG 367

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQ 424
            +  +     +  +   +Q YY++   ++         ++++ G P EV     + +L  
Sbjct: 368 KVVMVSAD--RLVDPATSQPYYQMRAVVSPEGMEKLKGLDIKPGMPVEVFVKTGSRSLFS 425

Query: 425 EIIHPITDN 433
            +  P+ D 
Sbjct: 426 YLFKPLVDR 434


>gi|330808166|ref|YP_004352628.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327376274|gb|AEA67624.1| Putative type I secretion membrane fusion protein, HlyD family
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 454

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 62/423 (14%), Positives = 146/423 (34%), Gaps = 15/423 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           ++ P   +    L+   II  + W+    ++   +  G+ +    +  I++   GI+ + 
Sbjct: 35  QDSPRRSRVTVWLAAGLIITGLVWAKFAVLQEVTTGEGKAIPSSKIQVIQNLEGGIVTEI 94

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G  + +G  LL  +D          +     L   ++   +  +    K       
Sbjct: 95  FVREGQMVNKGDTLLRLDDTRFLSNKGESEADRYALTAQVERLSAEAEGRPFKLST---- 150

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                 +++    +       ++      +    +    ++R       +  +K     +
Sbjct: 151 ------EVIAKAPQVAEDERSLYEQRQRRLASEQRTLTEQLRQKTQELAEFRSKQGQFSS 204

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L+  Q+++ M   L    AVS  ++ + +R   +    L             INE+  +
Sbjct: 205 ALALLQEEMNMSAPLVRTGAVSPVEILRLKRSAVEIRGSLNATTLAIPRAESAINEIKSK 264

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            +     +  E ++DL + +   +   +    ++    + T++SP+ G I   +  +   
Sbjct: 265 IDESEQTFRSEAAKDLNEKRTELSKITASSIAIDDRVTRTTVVSPVHGVIKQLKVNTIGG 324

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q    +++IVP      I AKV P+ +  +  G  A V+F  Y         A +E I
Sbjct: 325 VVQPGNDMVEIVPLEDNLLIEAKVRPQDVAFLHPGQKAMVKFSAYDYTIYGGLSAKLELI 384

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                  D   +   +Y + ++            + +  G  A V       ++   ++ 
Sbjct: 385 GADTITDD---KGNSFYLIQVRTDKNHLGGDTKPLLIIPGMVATVDIITGEKSVLDYLLK 441

Query: 429 PIT 431
           P+ 
Sbjct: 442 PVL 444


>gi|110679022|ref|YP_682029.1| HlyD family type I secretion membrane fusion protein [Roseobacter
           denitrificans OCh 114]
 gi|109455138|gb|ABG31343.1| type I secretion membrane fusion protein, HlyD family, putative
           [Roseobacter denitrificans OCh 114]
          Length = 437

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 83/437 (18%), Positives = 170/437 (38%), Gaps = 14/437 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +  K   P  +    LL ++G+IG   W++   I  +V +SG I  E N   ++ P  G+
Sbjct: 9   RAWKATGPLMVGMTALLILVGVIG--VWAVQARIAGAVIASGNIEVESNRQVLQHPQGGV 66

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           +    V++G  +  G  +L F+D +      +I+ +   I   +  +  E+  LD L   
Sbjct: 67  VGALPVQDGDFVNAGDTVLRFDDTQLRSELAIIEGQLFEILARKARLKAERDGLDALPLS 126

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++ E A +    Q L          +++F    +S+ +S +  L ++            
Sbjct: 127 EELAELAEKDPSVQAL------IDGQAQLFEARATSLQQSSEQILEQIAQAENQIEGATA 180

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + + L       + +LT  + LF+K     + ++  +R   +   E+         +   
Sbjct: 181 QLAALETQRGLIEAELTDSQTLFDKGLAPASRVSSLQREQARLLGEIGSITASVAQLRGE 240

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I  L  E         +E    L   Q    + + +     +T  +  + +P++G I  +
Sbjct: 241 IASLSIERIALTTRLREEAISTLRDLQFQEVELVQRRLSTMETLSRMELRAPVSGVIYGS 300

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           + F+  +    ++P+M I+P  +   + A+V P  I  V  G  AT+RF  +      + 
Sbjct: 301 RIFALQSVVSPAEPIMYIIPQDQPMVVAARVDPIHIDQVHVGQEATLRFAAFDQRLTPEI 360

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITD-LAFSDNNIELRNGFPAEVLFTAKNTTL 422
              + ++   +   +  +    YYEV L   +  +       L  G P E        + 
Sbjct: 361 IGHVVRMSADVFTDE--VTGMSYYEVKLVPKEGESEKLGGQVLLPGMPVEAFIKTAERSP 418

Query: 423 AQEIIHPITDNWPKIFE 439
              +  P+TD + + F 
Sbjct: 419 LNYLAKPLTDYFTRAFR 435


>gi|50120470|ref|YP_049637.1| HlyD family secretion protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49610996|emb|CAG74441.1| HlyD family secretion protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 452

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 71/439 (16%), Positives = 155/439 (35%), Gaps = 15/439 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +     L  +    LK    L ++G  GL+ W+ + P++  V+ SG ++  DN   ++  
Sbjct: 21  NVAAMPLHTDAGRYLKHGLWLVLVGFGGLLLWAGMAPLDKGVAVSGRVVVADNRKAVQPV 80

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDF 119
            SG I    V +G ++  G  L T + I      D     ++        +  E+  L  
Sbjct: 81  SSGRIASLTVRDGDRVQAGQILATLDQIPAQAQRDNLATQLQEAHAGEARLLAERDDLST 140

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +     +   +  +          +      ++F    +++ +        +        
Sbjct: 141 ILFPAAIEPYSTVT---------QQIQIAQQQLFISRRAALQQERAAMQAAIIGAKAQSQ 191

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             +   +  +       + L  ++ L ++  +++N L   ER   +    + +  + Q  
Sbjct: 192 GSQALLASSQTQFQIVNEQLRGLRPLAQEGYIARNRLLDVERQAAQLAGAIAQERNNQVQ 251

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + + + EL          Y K++   L   QR+  D   +L   E   +   I +P +GT
Sbjct: 252 LQQQVVELEQRIQQSQNEYQKDVRAQLADTQRSIQDLTQRLKTAEYELQHTHIRAPASGT 311

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +V     +        Q LM+IVP  +   I A++  + +  V  G    + F  +    
Sbjct: 312 VVGLALHTEGGVVNSGQMLMEIVPDGQPLLIDAQLPIELVDRVNNGLPVELLFSAFNQST 371

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             +   ++  I     Q       + YY + + + +        +++R G P E      
Sbjct: 372 TPRISGVVALIGAD--QLVEQQTGKPYYALRIHVDEQGKQQLAGLDVRPGMPVEAFIRTG 429

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +L   +  P++D     
Sbjct: 430 ERSLLNYLFKPLSDRLHLA 448


>gi|222082264|ref|YP_002541629.1| protein secretion protein [Agrobacterium radiobacter K84]
 gi|221726943|gb|ACM30032.1| protein secretion protein [Agrobacterium radiobacter K84]
          Length = 436

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 77/429 (17%), Positives = 159/429 (37%), Gaps = 15/429 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +     T+L + GI+G +  +    I  +V SSG ++ + +V  ++    GI+    V+N
Sbjct: 17  SIFVLATILLLFGIMGGL--AAATKISGAVISSGSLVVDSHVKPVQHLKGGIVSAINVKN 74

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAF 131
           G ++  G  L+  +D +T   + + +  +         +  E+   D +    D+L  A 
Sbjct: 75  GDRVDAGQVLIRLDDTQTRASLAIFRKRLNELAARTARLAAERDGKDAIAFPADLLANAG 134

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                   D +    +   ++FN  ++S          R++ +      L  +    R  
Sbjct: 135 N-------DDVKNILAGEQRLFNDRLASRQGQKSQLRERVQQLKQEVEGLVAQEKGKRVE 187

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +    K+L  ++ L ++  +S   +   +R   + T EL   +         I E   + 
Sbjct: 188 IQLVGKELGSLQQLLDQGIISATKVYSLQRDSARLTGELGNLVSSIAQTNGKITETELQI 247

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                +   E+S  L Q +        +L  +E   ++  I +P AG +      ++   
Sbjct: 248 IQIDNDRSSEVSDQLRQAESDTGQFSERLIAVEDDLKRIDIRAPQAGIVDQLNVHAAGAV 307

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              ++ +M+IVP         K+ P  I  V  G    +RF  +      +    +E I 
Sbjct: 308 IGPAETIMQIVPDKDALVAELKLAPLDIAQVAVGQVVALRFSAFNQRITPELNGRVETIS 367

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             ++        Q YY V  K +   +     +    G P E      + ++   +  P+
Sbjct: 368 ADLTTDQ--HSGQSYYVVRAKASKEEWDRLGELTPLAGMPVEAFMQTGSRSVLAYLTKPM 425

Query: 431 TDNWPKIFE 439
           TD   + F+
Sbjct: 426 TDQIKRAFK 434


>gi|34495761|ref|NP_899976.1| HlyD family secretion protein [Chromobacterium violaceum ATCC
           12472]
 gi|34101617|gb|AAQ57985.1| probable HlyD family secretion protein [Chromobacterium violaceum
           ATCC 12472]
          Length = 469

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 59/430 (13%), Positives = 141/430 (32%), Gaps = 13/430 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            + + +P   +      +   I    W+    ++      G+++       ++S   G++
Sbjct: 49  AILQQNPGRPRIFVWSMLGVFIVAFLWAAFAKVDEVSRGEGKVIPSSQNQHLQSLDGGVV 108

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V+ G  + +G  LL  ++      ++  +     L+      K+  +    +    
Sbjct: 109 SQILVKEGQVVQKGQLLLKVDNTRFVSSLEENQAQYLALQAKTARLKALANGTPFELP-- 166

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                    ++L    +       ++N     +  S+ +   ++        ++  +   
Sbjct: 167 --------PKVLQLAPEIAKQEMDLYNSKQMELNASVGIARQQLAQRSQELNEVRARRDQ 218

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                    K+L + + L E  AVS  DL + ER V +   E  +   +   +   I E 
Sbjct: 219 AITSYDLTVKELNVTRPLKESGAVSDVDLLRLERDVARFRGERDQAAAQMPKIQAAIGEA 278

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +            S +L       +   +    L    +   + SP+ G I      +
Sbjct: 279 QRKIQEVELAMRNTASAELSDTMAKASSLSAGSVALADKVKLSEVRSPVRGQIKRLFINT 338

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  + +++IVP      +  ++TP+ I  +  G  A VRF  Y        +  +
Sbjct: 339 IGGVVQPGKDIIEIVPMDDSLLLETRITPRDIAFLHPGQRAVVRFTAYDFTIYGGMEGSV 398

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
            +I       +   +   +Y V +K          + +  G  A+V       ++   ++
Sbjct: 399 AEIGADTITDE---KGNAFYIVKVKTQGSLLGKEKLPIFPGMVAQVDIMTGKKSILSYLL 455

Query: 428 HPITDNWPKI 437
            P+     + 
Sbjct: 456 KPVLRAKAEA 465


>gi|170026290|ref|YP_001722795.1| HlyD family type I secretion membrane fusion protein [Yersinia
           pseudotuberculosis YPIII]
 gi|169752824|gb|ACA70342.1| type I secretion membrane fusion protein, HlyD family [Yersinia
           pseudotuberculosis YPIII]
          Length = 442

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 163/433 (37%), Gaps = 15/433 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            L+ N    L     L +IG IG + W+ L P++  V+ +G ++  +N   I+    G I
Sbjct: 18  PLQINSGRYLNIGGGLVVIGFIGFLLWAGLAPLDKGVAVTGLLVVAENRKVIQPLQGGRI 77

Query: 68  KKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           ++  V  G +I+ G  L+T +D       D +  + +S       +  E++ LD +    
Sbjct: 78  QQLHVTEGDEIVSGQLLVTLDDTAIRNQRDNLQHQYLSALAQEARLTAEQNDLDVITFPQ 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +LE A +   E+ +    +      +     I+ +   L     R+  +   R + + +
Sbjct: 138 ALLEHATQPAVERNIILQQQLLHHRRQAHLSEIARLSTQLTRHQARLDGLQAMRSNHQRQ 197

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           S+L +  L S Q        L +   +++N L + E  +      + +   +     + I
Sbjct: 198 SNLFQQQLDSVQL-------LAKDGYIAKNKLLEMESQLTSLQARVEQGTSDIAEAHKLI 250

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E           Y  E S  L + Q+   + + +L I E       I +P++G+++   
Sbjct: 251 DETEQHVLQRREQYQSENSEQLAKAQQNTQELVQRLNIAEYELSHTRIFAPVSGSVIALA 310

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q LM+IVP  +  ++ A++  + I  V  G    + F  +      + +
Sbjct: 311 QHTVGGVVSSGQALMEIVPSGQPLFVEAQLPVELIDKVTVGLPVDLNFSAFNQSNTPRLQ 370

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             + +I     Q            V + +     +     +R G   +V       +L  
Sbjct: 371 GSVWRIGADRIQPPPTSPPYYPLTVAIDLDPTELA-----IRPGMAVDVFIRTGERSLLS 425

Query: 425 EIIHPITDNWPKI 437
            +  P TD     
Sbjct: 426 YLFKPFTDRLHLA 438


>gi|238754711|ref|ZP_04616063.1| HlyD family secretion protein [Yersinia ruckeri ATCC 29473]
 gi|238707019|gb|EEP99384.1| HlyD family secretion protein [Yersinia ruckeri ATCC 29473]
          Length = 438

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 79/441 (17%), Positives = 167/441 (37%), Gaps = 13/441 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           +      +L+ N    L    LL + G IG   W+   P++  V+  G ++  +N   ++
Sbjct: 3   LSEVGRPSLQTNSERYLYIGGLLVLTGFIGFFAWASFAPLDKGVAVPGIVIVAENRKIVQ 62

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSAL 117
           S   G I +     G  + +G  L++ +D         +  +  S+ +L   +  E+S  
Sbjct: 63  SLQGGRITQLHTTEGEWVEKGQLLISLDDTAIRSQRDNLQQQYFSLLSLEARLIAEQSNS 122

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +     +L++  +   E+L+    +      +V    ++ +   +     R+  +++ 
Sbjct: 123 ALITFPEALLKQRGQPIIEELMALQQQLLHHRHQVQKGELTRLSTEIARLHERLAGLHIQ 182

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R++ + +S L+       Q+ L  ++ L +   V+ +   + E        ++ ++    
Sbjct: 183 RVNNQRQSDLI-------QQQLKGIRALAQNGYVATSQQLEMESKAIMFLAKVDQDNSYI 235

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               RHI E       +   Y  +I   L + Q+   +    +T+ E       I +P +
Sbjct: 236 AETHRHIQETEQRLAQQHEQYQADIHEQLAKAQQNRRELGQHITVAEYELANMQISAPAS 295

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I+     +        Q LM+IVP+ +   I A++  + I  V  G    + F  +  
Sbjct: 296 GVIIALAQHTVGGVVGSGQQLMEIVPNGEPLLIEAQLPVELIDKVAVGLPVDLIFSAFNQ 355

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE-LRNGFPAEVLFT 416
               +    + ++     + DN    Q YY + + I   A     IE +R G   +V   
Sbjct: 356 SHSPRLAGTVLRVGAD--RLDNRHSLQPYYPLTVSINIDAVQQTQIEKIRPGMSVDVFVR 413

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
               +L   +  P TD     
Sbjct: 414 TGERSLLSYLFKPFTDRLQAA 434


>gi|72383813|ref|YP_293167.1| Type I secretion membrane fusion protein, HlyD [Ralstonia eutropha
           JMP134]
 gi|72123156|gb|AAZ65310.1| Type I secretion membrane fusion protein, HlyD [Ralstonia eutropha
           JMP134]
          Length = 433

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 72/414 (17%), Positives = 145/414 (35%), Gaps = 13/414 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +   ++  I+  + W+ L  ++      G+I+    V  +++   GI+ K  V  G  + 
Sbjct: 19  ILWSTLAFILIGLMWAALARVDEVTVGEGKIIPSSQVQVVQNLEGGIVAKIMVRPGQVVA 78

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +  PL+  +D   T      +     L   I    +    +         A         
Sbjct: 79  RDQPLMRIDDTRFTASYQEGRTKDDALVARIARLSAEAGGMPFDDGAATNA--------- 129

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                + S    +F     ++  +L +   +         +  ++   LR       K+L
Sbjct: 130 -GTRGFVSEERSLFESRKRALEANLAVVRQQAEQRRQELAEKRSREQQLRQSHQLVSKEL 188

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           TMM+ +  +  VS+ DL + ER       EL         +     E   +      ++ 
Sbjct: 189 TMMRPMVAQGVVSEVDLLRLERQANDLQGELEATRLAMPRLDAAYRESLKKIEELTTHFR 248

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E  +DL Q +     + +  T L+   ++  + +P+AG +   +  +     Q    L+
Sbjct: 249 AEAMQDLNQAKAEQQAQSATNTALQDRVDRTLVKAPVAGIVKQLKINTVGGVIQPGMDLV 308

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-SQQD 378
           +IVP      + A+V P  I  ++ G  A V+   Y       F   +E I       + 
Sbjct: 309 EIVPLEDTLLVEARVRPADIAFLRPGQPAMVKLSAYDFSIYGGFPGTVEHISADTMMPER 368

Query: 379 NNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              + + YY V ++  D   +     + +  G  A V       T+   ++ PI
Sbjct: 369 PGERPESYYLVRVRTRDNRPTGSTAQVPILPGMVATVDVLTGQKTVLHYMLKPI 422


>gi|153949022|ref|YP_001399133.1| HlyD family hemolysin secretion protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|152960517|gb|ABS47978.1| HlyD family hemolysin secretion protein [Yersinia
           pseudotuberculosis IP 31758]
          Length = 442

 Score =  313 bits (802), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 81/433 (18%), Positives = 163/433 (37%), Gaps = 15/433 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            L+ N    L     L +IG IG + W+ L P++  V+ +G ++  +N   I+    G I
Sbjct: 18  PLQINSGRYLNIGGGLVVIGFIGFLLWAGLAPLDKGVAVTGLLVVAENRKVIQPLQGGRI 77

Query: 68  KKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           ++  V  G +I+ G  L+T +D       D +  + +S       +  E++ LD +    
Sbjct: 78  QQLHVTEGDEIVSGQLLVTLDDTAIRNQRDNLQHQYLSALAQEARLTAEQNDLDVITFPQ 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +LE A +   E+ +    +      +     I+ +   L     R+  +   R + + +
Sbjct: 138 ALLEHATQPAVERNIILQQQLLHHRRQAHLSEIARLSTQLTRHQARLDGLQAMRSNHQRQ 197

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           S+L +  L S Q        L +   +++N L + E  +      + +   +     + I
Sbjct: 198 SNLFQQQLDSVQL-------LAKDGHIAKNKLLEMESQLTSLQARVEQGTSDIAEAHKLI 250

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E           Y  E S  L + Q+   + + +L I E       I +P++G+++   
Sbjct: 251 DETEQHVLQRREQYQSENSEQLAKAQQNTQELVQRLNIAEYELSHTRIFAPVSGSVIALA 310

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q LM+IVP  +  ++ A++  + I  V  G    + F  +      + +
Sbjct: 311 QHTVGGVVSSGQALMEIVPSGQPLFVEAQLPVELIDKVTVGLPVDLNFSAFNQSNTPRLQ 370

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             + +I     Q            V + I     +     +R G   +V       +L  
Sbjct: 371 GSVWRIGADRIQPPPTSPPYYPLTVAIDIDPTELA-----IRPGMAVDVFIRTGERSLLS 425

Query: 425 EIIHPITDNWPKI 437
            +  P TD     
Sbjct: 426 YLFKPFTDRLHLA 438


>gi|209547855|ref|YP_002279772.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209533611|gb|ACI53546.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 480

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 78/422 (18%), Positives = 169/422 (40%), Gaps = 12/422 (2%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL ++ ++GL  WS L P+  +  +SG I  E +   I+    GI+++  V NG  ++ G
Sbjct: 65  LLILVFVVGLGIWSALAPLHSAAVASGVIEPETSRKTIQHLEGGIVRRILVRNGDTVMAG 124

Query: 82  TPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             ++  +D ++    D  +  +   +  R  +  E++  D +    D+     +      
Sbjct: 125 QIVIELDDTKSRSERDSIQGQLWDAEGSRARLLAEQTGGDHVAYPDDLRAAMDK------ 178

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              +    +   K+F      +   +++   ++  +    + L  + + L    +  Q++
Sbjct: 179 YPSVSAILTGQQKIFEARRRVMQAEIQIGNEKIAQVRQEIVGLGAQKAALADRAAISQEE 238

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  +  L  K    ++ L   ER       +  +   +     + I+E   +     ++ 
Sbjct: 239 LEQVTILTAKGLERRSRLLNLEREKADLDGQQGQVGAQIARAYQVISESQVDLAKLESDR 298

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L E+++ +   +        +L  ++    +  I +P  GTI+  +  +S       +PL
Sbjct: 299 LSEVAQGMRDTESRIMQLRERLRAIDDQLSRTDIRAPEDGTIMNLRIHTSGGVIGAGEPL 358

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + ++P S    + A V P+ I  V  G  A V    Y   R    K  +E +        
Sbjct: 359 VDLLPRSDRLIVSAHVRPEDINLVHAGLEAQVHLLPYNQRRVPLLKGRVEYVSADRLTDT 418

Query: 379 NNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
                Q YY   +++TD   +   ++EL  G PA+ L     +++A   + P+ D++ + 
Sbjct: 419 Q--SGQPYYAATIRVTDERLAKMRDVELVAGMPAQTLIETGKSSVALYAVRPLLDSFNRA 476

Query: 438 FE 439
           F 
Sbjct: 477 FR 478


>gi|51594474|ref|YP_068665.1| HlyD family secretion protein [Yersinia pseudotuberculosis IP
           32953]
 gi|186893466|ref|YP_001870578.1| HlyD family type I secretion membrane fusion protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|51587756|emb|CAH19356.1| HlyD family secretion protein [Yersinia pseudotuberculosis IP
           32953]
 gi|186696492|gb|ACC87121.1| type I secretion membrane fusion protein, HlyD family [Yersinia
           pseudotuberculosis PB1/+]
          Length = 442

 Score =  313 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 163/433 (37%), Gaps = 15/433 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            L+ N    L     L +IG IG + W+ L P++  V+ +G ++  +N   I+    G I
Sbjct: 18  PLQINSGRYLNIGGGLVVIGFIGFLLWAGLAPLDKGVAVTGLLVVAENRKVIQPLQGGRI 77

Query: 68  KKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           ++  V  G +I+ G  L+T +D       D +  + +S       +  E++ LD +    
Sbjct: 78  QQLHVTEGDEIVSGQLLVTLDDTAIRNQRDNLQHQYLSALAQEARLTAEQNDLDVITFPQ 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +LE A +   E+ +    +      +     I+ +   L     R+  +   R + + +
Sbjct: 138 ALLEHATQPAVERNIILQQQLLHHRRQAHLSEIARLSTQLTRHQARLDGLQAMRSNHQRQ 197

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           S+L +  L S Q        L +   +++N L + E  +      + +   +     + I
Sbjct: 198 SNLFQQQLDSVQL-------LAKDGYIAKNKLLEMESQLTSLQARVEQGTSDIAEAHKLI 250

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E           Y  E S  L + Q+   + + +L I E       I +P++G+++   
Sbjct: 251 DETEQHVLQRREQYQSENSEQLAKAQQNTQELVQRLNIAEYELSHTRIFAPVSGSVIALA 310

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q LM+IVP  +  ++ A++  + I  V  G    + F  +      + +
Sbjct: 311 QHTVGGVVSSGQALMEIVPIGQPLFVEAQLPVELIDKVAVGLPVDLNFSAFNQSNTPRLQ 370

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             + +I     Q            V + +     +     +R G   +V       +L  
Sbjct: 371 GSVWRIGADRIQPPPTSPPYYPLTVAIDLDPTELA-----IRPGMAVDVFIRTGERSLLS 425

Query: 425 EIIHPITDNWPKI 437
            +  P TD     
Sbjct: 426 YLFKPFTDRLHLA 438


>gi|253998720|ref|YP_003050783.1| HlyD family type I secretion membrane fusion protein [Methylovorus
           sp. SIP3-4]
 gi|313200799|ref|YP_004039457.1| HlyD family type I secretion membrane fusion protein [Methylovorus
           sp. MP688]
 gi|253985399|gb|ACT50256.1| type I secretion membrane fusion protein, HlyD family [Methylovorus
           sp. SIP3-4]
 gi|312440115|gb|ADQ84221.1| type I secretion membrane fusion protein, HlyD family [Methylovorus
           sp. MP688]
          Length = 470

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 72/431 (16%), Positives = 147/431 (34%), Gaps = 14/431 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            +        K++       I+ L+ W+ L  ++      G ++    V  I+S   GI+
Sbjct: 51  AMLEQQTLRAKKVLYWVAGVIVLLLIWAALTKVDEVTRGEGRVIPSKQVQVIQSLDGGIV 110

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V  G  +  GTPL+  ++      +   +    +L       ++  D         
Sbjct: 111 TSLLVHEGQSVNVGTPLVRIDETRAISSLRENRSQYLSLVAKQARLRALAD--------- 161

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           + AF    E + +    Y    +  F      +   + +   ++        +++ K   
Sbjct: 162 DTAFMPPPEVMKENPSVYSQEQALYFASK-DELASQVAIAREQLTQRQRELSEIQAKLEQ 220

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
               L    ++L + K L    AVS+ DL + ER   +   +  +   +   +   I+E 
Sbjct: 221 AERGLELSSRELAVTKPLLGTGAVSEVDLLRLERDTARLRGDRDQARAQIGRVEAAISEA 280

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             + +    ++  ++  +L          +     L     Q T+ SP+ GT+      +
Sbjct: 281 SRKVSEAQQSFRSKVRTELSDTTAKLNSLVETSVALNDKVVQSTLKSPVKGTVSRLFINT 340

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  + +M+IVP      +  K+ P+ I  +  G  ATV+   Y         A +
Sbjct: 341 VGGVIQPGKEVMEIVPTDDALILETKIQPRDIAFISFGQPATVKLTAYDYTIYGTLDAKV 400

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
           E I       D   +   +Y V +K          + +  G  A+V       T+   ++
Sbjct: 401 ESISADSVVDD---KGNAFYIVRVKTIRSNLG-KGLPIIPGMVAQVDIMTGRKTVLSYLL 456

Query: 428 HPITDNWPKIF 438
            P+       F
Sbjct: 457 KPVLKARSYAF 467


>gi|22124233|ref|NP_667656.1| HlyD family secretion protein [Yersinia pestis KIM 10]
 gi|45442883|ref|NP_994422.1| HlyD family secretion protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108806101|ref|YP_650017.1| HlyD family secretion protein [Yersinia pestis Antiqua]
 gi|108810214|ref|YP_645981.1| HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|145600778|ref|YP_001164854.1| HlyD family secretion protein [Yersinia pestis Pestoides F]
 gi|150261118|ref|ZP_01917846.1| HlyD family secretion protein [Yersinia pestis CA88-4125]
 gi|162418329|ref|YP_001608192.1| HlyD family hemolysin secretion protein [Yersinia pestis Angola]
 gi|165928373|ref|ZP_02224205.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936987|ref|ZP_02225553.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166009674|ref|ZP_02230572.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166213739|ref|ZP_02239774.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401246|ref|ZP_02306746.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167421099|ref|ZP_02312852.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167425990|ref|ZP_02317743.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467887|ref|ZP_02332591.1| HlyD family hemolysin secretion protein [Yersinia pestis FV-1]
 gi|218930919|ref|YP_002348794.1| HlyD family secretion protein [Yersinia pestis CO92]
 gi|229839615|ref|ZP_04459774.1| HlyD family secretion protein [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229841700|ref|ZP_04461856.1| HlyD family secretion protein [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229896704|ref|ZP_04511869.1| HlyD family secretion protein [Yersinia pestis Pestoides A]
 gi|229904746|ref|ZP_04519857.1| HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|270488729|ref|ZP_06205803.1| type I secretion membrane fusion protein, HlyD family [Yersinia
           pestis KIM D27]
 gi|294505569|ref|YP_003569631.1| HlyD family secretion protein [Yersinia pestis Z176003]
 gi|21956997|gb|AAM83907.1|AE013631_3 secretion permease, Type I secretion system [Yersinia pestis KIM
           10]
 gi|45437750|gb|AAS63299.1| HlyD family secretion protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108773862|gb|ABG16381.1| HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|108778014|gb|ABG12072.1| HlyD family secretion protein [Yersinia pestis Antiqua]
 gi|115349530|emb|CAL22504.1| HlyD family secretion protein [Yersinia pestis CO92]
 gi|145212474|gb|ABP41881.1| HlyD family secretion protein [Yersinia pestis Pestoides F]
 gi|149290526|gb|EDM40603.1| HlyD family secretion protein [Yersinia pestis CA88-4125]
 gi|162351144|gb|ABX85092.1| HlyD family hemolysin secretion protein [Yersinia pestis Angola]
 gi|165915229|gb|EDR33840.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165919603|gb|EDR36936.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165991596|gb|EDR43897.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166205141|gb|EDR49621.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961228|gb|EDR57249.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049271|gb|EDR60679.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167055138|gb|EDR64937.1| HlyD family hemolysin secretion protein [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229678864|gb|EEO74969.1| HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|229691039|gb|EEO83092.1| HlyD family secretion protein [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229695981|gb|EEO86028.1| HlyD family secretion protein [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229700311|gb|EEO88345.1| HlyD family secretion protein [Yersinia pestis Pestoides A]
 gi|262363636|gb|ACY60357.1| HlyD family secretion protein [Yersinia pestis D106004]
 gi|262367566|gb|ACY64123.1| HlyD family secretion protein [Yersinia pestis D182038]
 gi|270337233|gb|EFA48010.1| type I secretion membrane fusion protein, HlyD family [Yersinia
           pestis KIM D27]
 gi|294356028|gb|ADE66369.1| HlyD family secretion protein [Yersinia pestis Z176003]
 gi|320013483|gb|ADV97054.1| HlyD family secretion protein [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 442

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 80/433 (18%), Positives = 163/433 (37%), Gaps = 15/433 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            L+ N    L     L +IG IG + W+ L P++  V+ +G ++  +N   I+    G I
Sbjct: 18  PLQINSGRYLNIGGGLVVIGFIGFLLWAGLAPLDKGVAVTGLLVVAENRKVIQPLQGGRI 77

Query: 68  KKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           ++  V  G +I+ G  L+T +D       D +  + +S       +  E++ LD +    
Sbjct: 78  QQLHVTEGDEIVSGQLLVTLDDTAIRNQRDNLQHQYLSALAQEARLTAEQNDLDVITFPQ 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +LE A +   E+ +    +      +     I+ +   L     R+  +   R + + +
Sbjct: 138 ALLEHATQPAVERNIILQQQLLHHRRQAHLSEIARLSTQLTRHQARLDGLQAMRSNHQRQ 197

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           S+L +  L S Q        L +   +++N L + E         + ++  +     + I
Sbjct: 198 SNLFQQQLDSVQL-------LAKDGHIAKNKLLEMESQSTSLQARVEQSTSDIAEAHKLI 250

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E           Y  E S  L + Q+   + + +L I E       I +P++G+++   
Sbjct: 251 DETEQHVLQRREQYQSENSEQLAKAQQNTQELVQRLNIAEYELSHTRIFAPVSGSVIALA 310

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q LM+IVP  +  ++ A++  + I  V  G    + F  +      + +
Sbjct: 311 QHTVGGVVSSGQALMEIVPSGQPLFVEAQLPVELIDKVAVGLPVDLNFSAFNQSNTPRLQ 370

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             + +I     Q            V + +     +     +R G   +V       +L  
Sbjct: 371 GSVWRIGADRIQPPPTSPPYYPLTVAIDLDPTELA-----IRPGMAVDVFIRTGERSLLS 425

Query: 425 EIIHPITDNWPKI 437
            +  P TD     
Sbjct: 426 YLFKPFTDRLHLA 438


>gi|170741552|ref|YP_001770207.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium sp. 4-46]
 gi|168195826|gb|ACA17773.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium sp. 4-46]
          Length = 435

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 74/442 (16%), Positives = 168/442 (38%), Gaps = 17/442 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H    ++L+R          LL++    GL  W+    +  +V + G ++ E NV +++ 
Sbjct: 5   HPRTRRSLRRAMVGGSAVTALLAL----GLGGWATTTELAGAVIAPGALVVETNVKKVQH 60

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALD 118
           P  G++ + +V +G+++  G  L+  ++  T   + +    +  +   +  +  E+   D
Sbjct: 61  PTGGVVGELRVRDGAEVRAGEVLVRLDETVTRANLAVVTKSQDELTARQARLKAEQDGRD 120

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            ++   ++L++  E     LL           ++F    ++          R+  +    
Sbjct: 121 QVHFSAELLQRGAEPAIADLL-------GEEERLFAIRRTAREGQKAQLRERIGQLREQI 173

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             + ++ +  +  +S   ++L  ++ LF KN +    +   ER   +   E    +    
Sbjct: 174 QGMTDQVTAKQREISLIGEELRGVRELFAKNLIQITRVTALERDAARLEGERGALVSSIA 233

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + E   +      +   E+ ++L + +   A+ + K    E    +  I +P  G
Sbjct: 234 QTKGKVTETELQVLQVDQDLRTEVGKELAEIRGKLAELVEKRVAAEDQLRRVEIRAPQDG 293

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +      +       S+PLM IVP S    + AK+ P+ I  V+ G+ A +RF  +   
Sbjct: 294 VVHQLAVHTVGGVVSPSEPLMLIVPRSDALTVEAKIQPQDIDQVRLGHRAVLRFSAFNQR 353

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
              +    +  +   ISQ         +Y V ++           ++L  G P E     
Sbjct: 354 TTPELSGEVSVVSADISQDQKT--GASFYTVRIRPAAGELDRLQGLKLVAGMPVESFIQT 411

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
               +   +  P+ D+  + + 
Sbjct: 412 GERAVMSYLTKPLQDHLARAWR 433


>gi|238785781|ref|ZP_04629753.1| HlyD family secretion protein [Yersinia bercovieri ATCC 43970]
 gi|238713315|gb|EEQ05355.1| HlyD family secretion protein [Yersinia bercovieri ATCC 43970]
          Length = 446

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 74/434 (17%), Positives = 164/434 (37%), Gaps = 15/434 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            L+ N    L+    L + G IG + W+ L P++  ++  G+I+  +N   I+    G I
Sbjct: 22  PLQINSGKYLRLGGGLVVGGFIGFLLWAGLAPLDKGIAVMGQIVVAENRKVIQPLQGGRI 81

Query: 68  KKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           ++  V  G ++ QG  L+T +D       D +  + +S       +  E+     ++   
Sbjct: 82  QQLHVIEGDEVEQGQLLITLDDTAIRSHRDNLQHQYLSALAQESRLIAEQHDWPEIDFPE 141

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +L+ + +   E+ +    +      +     I+ +   +    +R+         L+  
Sbjct: 142 VLLQDSAQYLVERTIALQRQLFLHRRQAQRSEIARLSAQITRHQSRL-------SGLQAL 194

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +  L   Q+ L  +++L +   V+QN L   ER        + ++  +     + I
Sbjct: 195 RDNNQHQLDLFQQQLHGVQSLAKNGHVAQNQLLDMERQAISLRTRVEQDSSDITEAYKLI 254

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E     +     Y  E    L + Q+   +   +L++ E   E   + +P++G+++   
Sbjct: 255 DETEQHISQRREQYQSENREQLAKAQQATQELEQRLSVAEFELENTRVTAPVSGSVIALA 314

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q LM++VP  +   + A++    I     G    + F  +      +  
Sbjct: 315 QHTVGGVVSTGQTLMELVPSGQPLLVEAQLPVALIDKAMVGLPVDLNFSAFNQSTTPRLY 374

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             + +I     Q    L  + YY + +       +   +++R G   +V       +L  
Sbjct: 375 GSVLRIGADRIQHPQTL--EPYYPLTIVFD---INQTPLKIRPGMSVDVFIRTGERSLLN 429

Query: 425 EIIHPITDNWPKIF 438
            +  P+TD     F
Sbjct: 430 YLFKPLTDRLHVAF 443


>gi|159185718|ref|NP_357223.2| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
 gi|159140852|gb|AAK90008.2| secretion protein, HlyD family [Agrobacterium tumefaciens str. C58]
          Length = 437

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 68/410 (16%), Positives = 142/410 (34%), Gaps = 13/410 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    +  +V +SG ++ +    +++ P  G++ +  V  G ++  G  ++  +  +T 
Sbjct: 35  WAATTNLAGAVVASGHLVVDSYTKKVQHPKGGVVGEILVNEGERVKAGDVVMRLDATQTR 94

Query: 94  DLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + +    +  L      ++ E+  L  L     ++ +  +      +    K      
Sbjct: 95  ANLAIVTKRLDELGARMARLEAERDDLAELIFPQALIARRDDPDVASAMRSETKLFEFRK 154

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  + +         R+         L+ +       L+  + ++T  K+L E+  
Sbjct: 155 SYREGRKAQLAE-------RITQFEHEIEGLKAQEVAYDNGLAVLEAEITSQKSLREQGV 207

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VS   LN  +        E  E I  Q      I E   +          E+ R+L + Q
Sbjct: 208 VSVQRLNSLQTQAATFGGERGEKIAYQAQTAGRITETKLQILQIDQELRTEVGRELREIQ 267

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               + + +    E   ++  I++P +G +      +       + P+M IVP      +
Sbjct: 268 AQMGEFVERKVAAEDELKRIDIVAPQSGMVHEMAVHTVGGVVTPADPIMLIVPDGDELAL 327

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
             ++ PK I  ++ G  A +R   +      + +  + +I   I+          YY   
Sbjct: 328 EVQIVPKDIDQLQVGQKAMLRMTAFNQRVTPELEGHVSRIAADITTDQRT--GLSYYLAR 385

Query: 391 LKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           + +        NN  L  G PAE        T    I  P+TD   + F 
Sbjct: 386 ISVPVSEREKLNNAPLVPGMPAEAFIQTSERTALSYIAKPLTDQISRAFR 435


>gi|27382082|ref|NP_773611.1| alkaline protease secretion protein [Bradyrhizobium japonicum USDA
           110]
 gi|27355252|dbj|BAC52236.1| aprE [Bradyrhizobium japonicum USDA 110]
          Length = 490

 Score =  312 bits (800), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 76/421 (18%), Positives = 156/421 (37%), Gaps = 11/421 (2%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL +  ++GL TW+ L P+E +  +SG + +E +   I+    GII+K  V +G  +  G
Sbjct: 76  LLVLCFMLGLGTWASLAPLESAAIASGVLESESSRKTIQHLEGGIIRKILVSDGDIVRSG 135

Query: 82  TPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             L+  +D      +   +            +  E+   + +     + + + ++     
Sbjct: 136 QTLIALDDTRAGSEMQSLQGQFWDAAARAARLQAEQQRFERIAIPDALEQDSRQNGVAAA 195

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                ++      +F   +      L +   R   +      L+ + +     +   +++
Sbjct: 196 AVSAQQF------IFQARMQVHESQLAVIRERRHQVEKEIEGLKAQETATGQRVDIVREE 249

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L M+  L  K    +  L   +R +        E   +     + I+E         +  
Sbjct: 250 LDMVATLVNKGLERRPRLLNLQRELADVEGRRGEIAAQIARAGQVISEQQATLFKLESER 309

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             EI++ L + Q        +L        +  + +P  G I   +  ++        PL
Sbjct: 310 QNEIAQSLREAQNQIFQLRERLLAARDQLSRTEVKAPEDGVITDLRVHTAGGVIGAGAPL 369

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M +VP      + A++ P+ I  V  G +A V    Y   R  + K  +  I     +  
Sbjct: 370 MDLVPRQDRLIVTARLRPEDIDVVHPGLSAEVHLVPYNQRRVPRLKGTVVHISAD--RLL 427

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           +    Q YY   ++I D   + N+I++  G P +V  T    T+A   + P+ D++   F
Sbjct: 428 DKRTDQPYYATKIRIDDGQIAANDIQIVPGMPVQVFITTGRGTVALYALRPLLDSFRGAF 487

Query: 439 E 439
            
Sbjct: 488 R 488


>gi|260429518|ref|ZP_05783495.1| type I secretion membrane fusion protein, HlyD family [Citreicella
           sp. SE45]
 gi|260420141|gb|EEX13394.1| type I secretion membrane fusion protein, HlyD family [Citreicella
           sp. SE45]
          Length = 435

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 71/412 (17%), Positives = 152/412 (36%), Gaps = 9/412 (2%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
             TW+    I  ++ + G+I  + N   ++ P  G++ +  VE G  +  G  L+  +  
Sbjct: 28  FGTWAATTEISGAIVAGGQIQVDQNRQVVQHPDGGVVSEILVEEGDVVETGDVLIRLDPT 87

Query: 91  ETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                +   D +   +   R  ++ E+   D +    ++LE A ++      D + +  S
Sbjct: 88  LKRSELKIVDDQYADLLARRARLEAERDGKDEIVFADELLEMAEKN------DQVEEMMS 141

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +F     SV R ++    R   I      +E + S L       Q++L   ++L +
Sbjct: 142 GQRNLFFARRDSVAREIEQLNKRSDQIANQIEGIEAQVSALSDQFDLIQRELADQQSLLD 201

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +     + +   +R   +   E  E +  +      I E+  E         +E    L 
Sbjct: 202 RGLAQASRVLALQREAARLAGERGELVASKAQAEGQITEIEIEVLKLDTTRREEAITTLR 261

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             Q    +   +   L +  ++  I +P+ G +     F+     + ++P++ +VP  + 
Sbjct: 262 DMQFRSRELAEQRLALGEQLKRMEITAPVGGIVYGLTVFAPRAVIRSAEPVLYLVPQDRP 321

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             I  ++ P  I  V      T+RF         +    + ++       +N   +    
Sbjct: 322 LVISVQIEPIHIDQVHLDQDVTLRFASLDQRMTPELFGRVTRVSADAFVDENTSVSYYRA 381

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           EV++  +++A      +L  G P E        T    ++ P TD + + F 
Sbjct: 382 EVVMDDSEIAKLPEGTQLIPGMPVEAFLRTGERTALAYLLKPFTDYFARAFR 433


>gi|262371392|ref|ZP_06064710.1| HlyD family secretion protein [Acinetobacter johnsonii SH046]
 gi|262313729|gb|EEY94778.1| HlyD family secretion protein [Acinetobacter johnsonii SH046]
          Length = 479

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 60/424 (14%), Positives = 139/424 (32%), Gaps = 10/424 (2%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P   +    +  +  + L+ W+    ++      G+++    +  I+S   G+++K  V+
Sbjct: 62  PLKTRMTLYIIAVTFVCLLLWAGFAKVDEITRGEGKVIPSQQMQVIQSVDGGVVEKVYVQ 121

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +G  L+  +    T  ++     I  L+  +    + L+        +      
Sbjct: 122 EGEHVKKGDLLIRIDPTRFTSNLNEVNAKIFALQTKVRRLSAQLNGSGYTSGSVPAGVSP 181

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                 D      +  S+ +   +  + +        + +        +           
Sbjct: 182 ------DAAAMIMAQESQYYAESLRELSQRTMTNQGTVSTRQQESQRAQAALGQAERAYQ 235

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++L   + L +  AVS+ D+ + ER V  +  E ++     +     I E     + 
Sbjct: 236 LAVRELNTTRPLLKTGAVSEMDILRLERDVSNADGERKQAAANLRGSQASIGEAQSRTSE 295

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              +   +   +L + Q         ++ +    +   I SP  G +      +     +
Sbjct: 296 AAVSLKNQWRNELAEAQAQLVSLKESISGVADRVKTTDIRSPTNGIVQKIFFNTIGGVVK 355

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            S  + +IVP      + AKV+PK I  V+    A ++F  Y         A ++ I P 
Sbjct: 356 PSDQVAEIVPLDGQLIVEAKVSPKDIAFVRPDLPAVIKFTAYDFSIYGGMDAKVKHISPD 415

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
               +   +   +Y V        F    + +  G   ++       T+   ++ PI   
Sbjct: 416 TFTDE---KGNMFYIVRAVTDKPTFG-KGLSVIPGMTVQLDIMTGKKTILSYLLKPILKA 471

Query: 434 WPKI 437
               
Sbjct: 472 KNNA 475


>gi|257095764|ref|YP_003169405.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048288|gb|ACV37476.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 467

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 62/431 (14%), Positives = 146/431 (33%), Gaps = 14/431 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            + +  P   + +     +     + W+ +  ++      G+++    +  ++S   G++
Sbjct: 48  AILQQDPLRARVLLKSIGVAFALFVMWAAVSQVDEVTRGEGKVIPSRQLQVLQSLDGGVV 107

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V  G  +     LL  +       +   +V    L       ++  + +  K    
Sbjct: 108 DEILVHEGDVVEPEQILLRIDQTRFVSSVRESRVQYTALVAKAARLRALTEGVPFKIP-- 165

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                   +++L    +      +++    S +  +  +   ++       +++  K   
Sbjct: 166 --------DEVLKEDPRTAEEERRLYESRRSELETTTSIARQQLTQRQQELVEVRAKHEQ 217

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                    ++L++ K L    AVS+ +L + ER V +   E      +   +   INE 
Sbjct: 218 ASKAHELAARELSVTKPLIGSGAVSEVELLRLERDVSRFRGEREMAAAQIGRLQSAINEA 277

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +       +  E  ++L +              L     +  + SP+ GT+      +
Sbjct: 278 NRKIEEVGLAFRNESGKELGETMAKLNSLAEGGVGLSDKVSRSVLRSPVKGTVKRLLVNT 337

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  + +++IVP      + A+V P+ I  +  G  A V+F  Y           +
Sbjct: 338 VGGVVQPGKDIVEIVPLEDNLLLEARVHPRDIAFLHPGQKAVVKFTAYDFAIYGGLDGKL 397

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
           E I       D   +   +Y V ++        NN+ +  G  AEV       ++   ++
Sbjct: 398 EHIGADTVVDD---KGNAFYIVRVRTNQSTLG-NNLPVIPGMVAEVDIVTGEKSVLSYLL 453

Query: 428 HPITDNWPKIF 438
            P+     + F
Sbjct: 454 KPVLRAKARAF 464


>gi|85705070|ref|ZP_01036170.1| type I secretion membrane fusion protein, HlyD family protein
           [Roseovarius sp. 217]
 gi|85670392|gb|EAQ25253.1| type I secretion membrane fusion protein, HlyD family protein
           [Roseovarius sp. 217]
          Length = 435

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 71/442 (16%), Positives = 162/442 (36%), Gaps = 11/442 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M            P  +  + L+ ++G  G  TW++   I  ++ + G I  + N   ++
Sbjct: 1   MSAPASGAWSARTPLIVGLIGLILLVG--GFGTWAVFTQISGAIIAPGRIEVDQNRQVVQ 58

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSAL 117
            P  G++   +V+ G ++  G  L+  +  +    + + +  +  L   R  ++ E+   
Sbjct: 59  HPDGGVVSAIEVKEGDRVSAGQVLVRLDPTDLQSELSIIENQLAELMARRGRLEAERDGR 118

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D L     ++E + ++R+           +    +F+    +V   +     R   I   
Sbjct: 119 DTLKFDPLLIEISAQNRDA------NDLMAGQKTLFDARAQTVVAEIDQLHKRRGQITNQ 172

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              ++ +   L   L   + +LT  ++L ++     + +   +R   + +  + +   ++
Sbjct: 173 IDGIDAQQVALSRQLDLIELELTDQQSLLDRGLAQASRVLNLQREQARLSGTMGDLAAQK 232

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 I E+         +  +E    L   Q    +   +   L +   +  I SP++
Sbjct: 233 AEAEGRITEIEITILKLGTDRREEAITTLRDLQFRELELREQRRALIEQMGRLDIPSPVS 292

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q F+  +  + + P++ IVP  +   I A+V    +  +  G   T+RF     
Sbjct: 293 GVVYNLQVFALRSVIRPADPVLFIVPQDRPLVINARVDSIHVDKLFVGQEVTLRFSALDQ 352

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
               +    + +I     + +    +    E++L   + A       L  G P E     
Sbjct: 353 RTTPELFGRVTQISADAFEDEATRASYYRAEIVLSEGEQARLPEGTALIPGMPVEAFIRT 412

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
            + T    ++ P TD   K F 
Sbjct: 413 ADRTPIAYLVKPFTDYLAKAFR 434


>gi|317050415|ref|YP_004111531.1| HlyD family type I secretion membrane fusion protein
           [Desulfurispirillum indicum S5]
 gi|316945499|gb|ADU64975.1| type I secretion membrane fusion protein, HlyD family
           [Desulfurispirillum indicum S5]
          Length = 433

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 72/423 (17%), Positives = 155/423 (36%), Gaps = 15/423 (3%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL  +G  G + W+I  P+   + + G +  E N   ++  + GI+++  V     + +G
Sbjct: 19  LLIGLGFGGFLLWAITAPLGKGIVAEGVVSVETNRKAVQHLYGGIVEEILVRENQLVQKG 78

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             L+   D          +  + +++     +  E+  L  +    +VL        E +
Sbjct: 79  ELLIRLADSRPRAEYTTARYELISVQVQYARLLAERGGLPDVIFPLEVLSSDDTEVVELV 138

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                    T  ++F     S+    ++ L  + +       L +  +     +   +++
Sbjct: 139 --------QTQRELFERRRKSLQNEQQIILENIEAQQKYIESLGDVLASRDRQIMLLKEE 190

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  ++ L +     +N L  QER + +      E++         I EL         ++
Sbjct: 191 LAGLRELAKDGHYPRNSLLNQERALEEIISRRSEDLAAIARTQSSITELRLSLVKLEQDF 250

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             ++   +   QR       +    +   ++  +L+P +G ++   + +     +  + +
Sbjct: 251 HHDVEAQISDAQRRLGSLREQYHAAKDILQRTDVLAPESGIVLSLSAHTIGGVVRAGETV 310

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M+IVP      + AK++P+ I  V +   A +RF  +        +  +  + P     +
Sbjct: 311 MEIVPVHAELIVEAKISPQDIDRVHRDMQADLRFSAFDARNTPVIEGEVIAVSPDRLIDE 370

Query: 379 NNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
                  YY   + I+         N  L  G PAEV+      TL Q +I P  D    
Sbjct: 371 QTR--MPYYLSKIAISPEELQKLGANNRLVPGLPAEVVIKTGERTLLQYLIDPFLDRLFV 428

Query: 437 IFE 439
            F+
Sbjct: 429 SFK 431


>gi|114766809|ref|ZP_01445743.1| type I secretion membrane fusion protein, HlyD family [Pelagibaca
           bermudensis HTCC2601]
 gi|114541003|gb|EAU44061.1| type I secretion membrane fusion protein, HlyD family [Roseovarius
           sp. HTCC2601]
          Length = 435

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 75/440 (17%), Positives = 157/440 (35%), Gaps = 11/440 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +   K      P +     LL +  ++G  TW+    I  ++ + G+I  + N   ++  
Sbjct: 2   NDDTKGFSLRTPMTFGLAALLIL--VVGFGTWAATTEISGAIIAGGQIQVDQNRQVVQHA 59

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSALDF 119
             GI+++  VE G  +  G  ++  +       +   + +   +   R  ++ E+   + 
Sbjct: 60  DGGIVEEILVEEGDTVEAGEVMIRLDPTLLRSELTIVEGQYFELLARRSRLEAERDGSEE 119

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +     +L  A      +  D + +  S    +F    +S+ R ++    R   I     
Sbjct: 120 IVFPEILLTHA------ETDDEVAELISGQRNLFFARRASMDREVEQLNKRSDQIGNQIE 173

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +E +   L A LS   ++L   ++L  +     + +   +R   +   E  E +     
Sbjct: 174 GVEAQVEALAAQLSFVDEELESQRSLLARGLAQASRVLSLQREAARLAGERGELVSTMAQ 233

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               I E+  E         +E    L   Q    +   +   L +  ++  I +P+AG 
Sbjct: 234 AEGEITEIEIEIIKLDTARREEAITTLRDMQYRSRELAEQRLALLEQLKRLEITAPVAGV 293

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +     F+  +  + + P++ +VP  +   I A++ P  I     G   T+RF       
Sbjct: 294 VYGMTVFAPRSVIRAADPVLYLVPQDRPLVIAAQIEPIHIDQTHVGQEVTLRFSALDQRT 353

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +    + +I       +    +    E+IL   +         L  G P E      +
Sbjct: 354 TPELFGTVTQISADAFTNEETSVSYYRAEIILNEGEAEKLPEGSTLIPGMPVEAFLRTAD 413

Query: 420 TTLAQEIIHPITDNWPKIFE 439
            T    ++ P TD + K F 
Sbjct: 414 RTPLAYLVKPFTDYFSKAFR 433


>gi|330445560|ref|ZP_08309212.1| type I secretion membrane fusion, HlyD family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328489751|dbj|GAA03709.1| type I secretion membrane fusion, HlyD family protein
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 439

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 87/440 (19%), Positives = 172/440 (39%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
            +  W N  + H    +++  L  + +I +ITW+    +E  V   G+++    + +I+S
Sbjct: 3   SNLKWAN--QKHAYRSRKIVWLCSLLVIAIITWAAYSKLEEVVVGDGKVVPTQAIQKIQS 60

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL- 120
              GII++  V  G Q+ QG  LL  +D              + L+  I   K+ L+ + 
Sbjct: 61  LEGGIIEQVLVSPGEQVKQGQTLLILDDTRFRTAFQESDEHFRTLQAQIKRLKAELETVK 120

Query: 121 --NNKYDVLEKAFESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLN 177
               + D  ++   S +    D L K     +K  +N  IS +   L+     +      
Sbjct: 121 VNTREKDWKKQITISHQALDFDDLSKRAQINAKANYNERISQIESQLEEAQLTIEQQTEA 180

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             D ++ ++ L + L    K+  M++   ++ AV++ +L Q  R   K   E+  +   Q
Sbjct: 181 LRDAKSNTATLNSSLRLVNKEARMLEGAVKRGAVAEVELIQTRRDQVKIRGEIASSKVAQ 240

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +     + E           +   +   L +    FA        L    ++  I +P+ 
Sbjct: 241 QKASAALREAIVMRRNLALEFRTSVQAQLNEATNQFAQLEDSQEGLADQLKRTEITAPMD 300

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GTI      S     +  +P+M++VP+     + A+++P+ I  V KG  AT++F  Y  
Sbjct: 301 GTIKDILVRSLGGVVKPGEPIMELVPNDSKLIVEARISPQDIAFVSKGLEATIKFTAYDF 360

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +     K  +  +     Q ++      YY   +++ D    D  +++  G  A V    
Sbjct: 361 VVYGGRKGTVTYVSADALQTED---GTAYYRAHIQLHDD--PDTRLQVIPGMQAMVDILT 415

Query: 418 KNTTLAQEIIHPITDNWPKI 437
              T+    + P+       
Sbjct: 416 GEKTVLSYWLKPLLRAKASA 435


>gi|313682017|ref|YP_004059755.1| type i secretion membrane fusion protein, hlyd family
           [Sulfuricurvum kujiense DSM 16994]
 gi|313154877|gb|ADR33555.1| type I secretion membrane fusion protein, HlyD family
           [Sulfuricurvum kujiense DSM 16994]
          Length = 448

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 72/426 (16%), Positives = 159/426 (37%), Gaps = 21/426 (4%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           RN   S +      +  + G + W  +  ++      G+++   ++  I++   GI+++ 
Sbjct: 27  RNTAKSSRIFLWSVLTMVFGTLIWMSIAEVDEITKGDGKVIPSSHLQVIQNLEGGIVEEI 86

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVL 127
           +V  G  + +G  L+   D++     +  ++  + L+     +  E S  +F  +K +  
Sbjct: 87  RVNEGDHVKKGDLLIRLSDVKPKSEFEGNRIQYEGLKAKQYRLLAEASMGEFSVDKAERQ 146

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +             L  +     + F+   S +   L +   ++        D ++K  L
Sbjct: 147 K-------------LDGFIQQEEEAFHTNRSLLISKLNILNEQINQRITELSDAKSKVKL 193

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L        K+ ++ +++ +K   S++D  + +R       +L E  +    +   I EL
Sbjct: 194 LTQAYEVIAKEESLSQSMLQKGVESKSDNWKLQRERSTIEQQLEEAKNSVPRLEHAIAEL 253

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            ++   E  +Y  +  ++L QN        +    L    ++  I+SP+ G +      +
Sbjct: 254 KEKMIQEKIDYQNKAKQELSQNDAELGRIHASSVPLSDQVDRSKIISPVTGIMKQMFINT 313

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                +    + +IVP      I  K+ P  I  +  G  A V+F  Y           +
Sbjct: 314 VGGVVRPGMDIAEIVPTEDSLLIETKIKPADIAFLHPGQKAIVKFSAYDFSIYGGMVGEV 373

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQ 424
            +I           + + YY V +KI   +      + + +  G  A V       T+ Q
Sbjct: 374 YQISSDTIVDQQ--KQESYYLVKVKINQKSAINSKLSQVTIMPGMTANVDIVTGKKTILQ 431

Query: 425 EIIHPI 430
            ++ PI
Sbjct: 432 YLMKPI 437


>gi|254482413|ref|ZP_05095653.1| type I secretion membrane fusion protein, HlyD family [marine gamma
           proteobacterium HTCC2148]
 gi|214037418|gb|EEB78085.1| type I secretion membrane fusion protein, HlyD family [marine gamma
           proteobacterium HTCC2148]
          Length = 469

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 61/429 (14%), Positives = 160/429 (37%), Gaps = 14/429 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
               +      P   + +  +  + +IGL+ W+ L  I+      G+++    V  I+S 
Sbjct: 45  QDAHRAFVEQQPLRARALLYVIALIVIGLVVWASLAKIDEVTRGQGKVIPSRQVQVIQSQ 104

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++ +  V  G  + +G  L++ +   +       +   + L   I    + +D    
Sbjct: 105 DGGVVTEILVREGDLVTKGQLLVSLDQTRSQSSFRENRAEYQALAVKIARLTAVVDKTEF 164

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           + D            L++ +    +    ++    + +    ++   ++       ++++
Sbjct: 165 RPD----------PSLIEAVPGIVNQEQALYESSQAELGFEKRIAQEQLVQREQELIEVK 214

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +       L   +++L + K +    AVS+ ++ + ER V + + E ++   +   +  
Sbjct: 215 ARERQAARSLQLTEQELGLTKPMVVSGAVSEVEILRLEREVNQLSGERKQAAAQIDRIES 274

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I E   + +     ++ E+  ++                L    +Q  + SP+ GT+  
Sbjct: 275 SIQEAKSKVSGVELEFVNEVREEMADTITRMNALRESGLGLSDRVKQTEVRSPVNGTVKQ 334

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
              ++        + ++++VP      +  ++ PK I  +  G  A V+F  Y  +    
Sbjct: 335 LYYYTIGGVVLAGKEIIEVVPADDTLLLEVRIRPKDIAFLVPGQKALVKFTAYDFVVYGG 394

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
              I+E I       +       +YEV+++  ++  +++   +  G   EV       T+
Sbjct: 395 LDGIVEHIGADTVMDEE---GNPFYEVLVRTDEVGIAEDK-PIIPGMTVEVDILTGKKTV 450

Query: 423 AQEIIHPIT 431
              ++ P+ 
Sbjct: 451 LAYLMKPVL 459


>gi|307942199|ref|ZP_07657550.1| type I secretion membrane fusion protein, HlyD family [Roseibium
           sp. TrichSKD4]
 gi|307774485|gb|EFO33695.1| type I secretion membrane fusion protein, HlyD family [Roseibium
           sp. TrichSKD4]
          Length = 429

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 85/435 (19%), Positives = 163/435 (37%), Gaps = 20/435 (4%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             LK++  + +   +LL++I   G+  W+    I  +V SSG ++ E N  +++    GI
Sbjct: 7   AGLKKSVRSHIVTASLLALIVAGGIGGWAANAEISGAVVSSGTVVVESNTKQVQHQEGGI 66

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNK 123
           +K+ +V+NG  +  G  L+  +D  T   + +    ++ L      +  E+  LD ++  
Sbjct: 67  VKEIRVQNGDTVKAGDLLIRLDDTVTRANLSVITKQLRELSAQEVRLVAERDGLDRIDFG 126

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            DV     E  +  L++                  SV         ++R        L  
Sbjct: 127 ADVDVGPIEQGQVALME--------------ARRESVVGRKNQIEEQIRQFDKQIEGLTA 172

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +       +    ++L+ + +L  KN VS++ +    R   +   E  E + +     + 
Sbjct: 173 QLKAKDVEIKLLDEELSDLSDLLAKNLVSKSRVTGLRRERARLQGEYGEFLSQIARSEQA 232

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I+E   +      +Y  E+   L+Q +   A    +    E    +  I +P  G +   
Sbjct: 233 ISERRVQILQIEDSYRAEVLEQLQQVRSEIARLQEQRIGAEDQLTRVDIRAPQTGYVHQL 292

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +        + +M IVP      I  +V P  I  +  G  ATVRFP +      + 
Sbjct: 293 AVHTIDGVIAPGETVMVIVPQEDQLLIETQVRPVDIDQLGTGQQATVRFPSFDQRTTPEL 352

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
           KA +  +   +   +       YY   L I +   +      L  G P E     ++ T+
Sbjct: 353 KASLLTVSADLIMDERTGTG--YYTARLLIPEEELAKLGGKALIPGMPVEAFMKTQDRTV 410

Query: 423 AQEIIHPITDNWPKI 437
              ++ P+TD     
Sbjct: 411 LSYLVKPVTDQIAHA 425


>gi|89074017|ref|ZP_01160518.1| putative RTX transport protein [Photobacterium sp. SKA34]
 gi|89050155|gb|EAR55666.1| putative RTX transport protein [Photobacterium sp. SKA34]
          Length = 437

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 86/440 (19%), Positives = 172/440 (39%), Gaps = 13/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
            +  W N  + H    +++  L  + +I +ITW+    +E      G+++    + +I+S
Sbjct: 3   SNLKWAN--QKHAYRSRKIVWLCSLLVISIITWAAYSKLEEV--GDGKVVPTLAIQKIQS 58

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL- 120
              GII++  V+ G Q+ +G PL+  +D              + L+  I   K+ LD + 
Sbjct: 59  LEGGIIEQVLVKAGEQVKKGQPLIILDDTRFRTAFQESDEHYRTLQAQIKRLKAELDTVK 118

Query: 121 --NNKYDVLEKAFESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLN 177
               + D  ++   S +    D L K     +K  +N  I  +   L+     +      
Sbjct: 119 VNTKEKDWKKQITISHQAIAFDDLSKRAQLNAKANYNERIGQIESQLEEAQLTIEQQTEA 178

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             D ++ +S L + L    K+  M++   ++ AV++ +L Q  R   K   E+  +   Q
Sbjct: 179 LRDAKSNTSTLYSSLRLVNKEAKMLEGAVKRGAVAEVELIQTRRDQVKLRGEIASSKVAQ 238

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +     + E           +   +   L +    FA        L    ++  I +P+ 
Sbjct: 239 QKTSAALREAIVMRRNLALEFRTSVQAQLNEATNQFAQLEDSQEGLADQLKRTEITAPMD 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GTI      S     +  +P+M++VP+     + A+++P+ I  V KG  AT++F  Y  
Sbjct: 299 GTIKDILVRSLGGVVKPGEPIMELVPNDSKLIVEARISPQDIAFVSKGLEATIKFTAYDF 358

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +     K  +  +     Q ++      YY   +++ D    D  +++  G  A V    
Sbjct: 359 VVYGGRKGTVTYVSADALQTED---GTAYYRAHIQLHDD--PDTRLQVIPGMQAMVDILT 413

Query: 418 KNTTLAQEIIHPITDNWPKI 437
              T+    + P+       
Sbjct: 414 GEKTVLSYWLKPLLRAKASA 433


>gi|330502341|ref|YP_004379210.1| type I secretion membrane fusion protein, HlyD [Pseudomonas
           mendocina NK-01]
 gi|328916627|gb|AEB57458.1| type I secretion membrane fusion protein, HlyD [Pseudomonas
           mendocina NK-01]
          Length = 445

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 59/426 (13%), Positives = 156/426 (36%), Gaps = 15/426 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L  + P  ++      +  ++ L  W+    I+      G+ +    + ++++   GI
Sbjct: 22  KALVEDAPRVVRLTIWTLLGFVVFLGVWAHFAEIDEVTRGEGKAIPSSKLQKVQNLEGGI 81

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  +  G  +  G PLL  +       +   +    +++  ++   + +D   ++  +
Sbjct: 82  VSELFIHEGQVVEVGAPLLRLDPTRFESNVGETEADRTSMQLRVERLSAEVD---DRPLL 138

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +     +   +        + +  +  N  +  + + +  +   ++     +    N   
Sbjct: 139 IPDELRALAPEQAASEEALYLSRRQQLNDELGGLEQQMVQRRQELQEFISKQAQFRNSLQ 198

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           LLR       +++ + + L  + A+S+ ++ +  R   ++  +L             I E
Sbjct: 199 LLR-------QEIAISEPLVAEGAISRVEVLRLRRAEVETRGQLDATTLAIPRAESAIKE 251

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++     + +  E    L + +       +    LE   ++  + SP+ G +      
Sbjct: 252 AENKLAETRSRFRSEALGQLNEARTELTKANATGKALEDRVKRTLVTSPVRGIVKQLLVN 311

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    L++IVP      + A++ P+ I  +  G  A V+F  Y        +A 
Sbjct: 312 TIGGVIQPGSDLVEIVPLDDTLLVEARIRPQDIAFLHPGQKAMVKFTAYDFTIYGGLEAD 371

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I       ++      +Y + L+   + L   +N + +  G  A V       ++  
Sbjct: 372 LEQIGADTVTDED---GNSFYLIKLRTRKSHLGSEENPLLIIPGMVASVDIMTGKKSILS 428

Query: 425 EIIHPI 430
            ++ PI
Sbjct: 429 YLLKPI 434


>gi|163740441|ref|ZP_02147835.1| type I secretion membrane fusion protein, HlyD family [Phaeobacter
           gallaeciensis 2.10]
 gi|161386299|gb|EDQ10674.1| type I secretion membrane fusion protein, HlyD family [Phaeobacter
           gallaeciensis 2.10]
          Length = 438

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 75/442 (16%), Positives = 158/442 (35%), Gaps = 9/442 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M+    +    +    L    +  II + G  TWS+   I  +V +SG I  + N   ++
Sbjct: 1   MNQSKTETNSWSARRPLMIGLIGVIILLGGFGTWSVATSIAGAVVASGRIEVDRNRQVVQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSAL 117
               GI+++  VE G  + +G  LL  +  E    +   + +   +   R  +D E+ + 
Sbjct: 61  HLDGGIVQEILVEEGDTVAEGAVLLRLDAKELRSQLVITEGQLFELMARRARLDAERDSA 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + +    ++ + +    E      +        ++F     SV R +     R   I   
Sbjct: 121 ETVEFDTELHDLSETRPE------VADLMQGQVRLFEARKDSVAREIDQLEKRRTQIQDQ 174

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            + +  + +  R  L   +++L   ++L ++       +    R        L E I  +
Sbjct: 175 IIGVRAQQASRRTQLDLIEEELANQQSLLDRGLAQAGTVLNLRRTEADLQGSLGELIATE 234

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 I E+  E         +E    L   +    +       L+    +  I +P++
Sbjct: 235 AQAEGRITEIDIEILKLGTQQREEAITRLRDLRYQELELAETRRALKDRLARLDITAPVS 294

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q  +  +  + + P++ +VP  +   I A+V P  +  +  G   T+RFP    
Sbjct: 295 GIVYGLQVHTPRSVIRAADPVLYLVPQDRPLVIAAQVAPTDVDQIFVGQAVTLRFPALDQ 354

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
               +    +++I     +   +  +    E+ L    L        L  G P E     
Sbjct: 355 RSTPELFGSVKQISADAFEDQASKLSYYRTEIELNPGQLETLPEGTVLIPGMPVEGYIRT 414

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
            + T    ++ P+ D + + F 
Sbjct: 415 ADRTPLGYLVKPLADYFVRAFR 436


>gi|144900517|emb|CAM77381.1| Type I secretion membrane fusion protein, HlyD [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 522

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 76/436 (17%), Positives = 157/436 (36%), Gaps = 15/436 (3%)

Query: 7   KNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
             L   +P    R +  L+++ I   I W+ +  ++    + GE++ E  V  I+    G
Sbjct: 97  AGLADTYPLPTWRPIARLAMLAIALFIVWANIARLDEVTIAEGEVVPEGKVKVIQHLEGG 156

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +I++  V  G ++ +G PLL  +        +  +V +  L   +   ++ L+       
Sbjct: 157 VIREIYVAEGDEVKEGAPLLQLDLSAVAMNREELQVRVDGLNLQVARLRAELEG------ 210

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
               A                   ++ F     +   +L +   + R   L   +L+ + 
Sbjct: 211 ---AATVKFPAAEQARQPNLVQAETRNFEARRQAHKSTLTVLADQARQKMLEVQELDARL 267

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             + A L   ++ L M  +L      ++ +  Q +        +                
Sbjct: 268 RAVTANLKLARERLAMSTDLVRSGLTAKMEHVQLQAQTEDLEGQANTLRASIPRAQAAQA 327

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E       E ANY +    +L + +   A     +T     +++  I SP  G I   ++
Sbjct: 328 EAKSRQEQEEANYARTAQAELSEAELNLARTRELMTQASDQQQRTQITSPTDGIIKNLRA 387

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +   P+M+IVP  +   I AK++P    +V+ G  ATV+   Y  +     + 
Sbjct: 388 NTIGGVIRPGDPIMEIVPLHERLQIEAKLSPMDRGYVQPGQVATVKLSAYDYVVYGGLEG 447

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLA 423
            +  + P  +   +N   Q +Y V++        D      +  G  A V     + T+ 
Sbjct: 448 KVSLVAPDTTMGQDN---QPFYRVLVLTDKSYLGDEADKRTITPGMVASVEIHTGDRTVM 504

Query: 424 QEIIHPITDNWPKIFE 439
           Q ++ P+     + F 
Sbjct: 505 QYLLKPVLKLRHEAFR 520


>gi|120603019|ref|YP_967419.1| HlyD family type I secretion membrane fusion protein [Desulfovibrio
           vulgaris DP4]
 gi|304569690|ref|YP_010239.2| HlyD family type I secretion membrane fusion protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|120563248|gb|ABM28992.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio vulgaris DP4]
 gi|311233248|gb|ADP86102.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio vulgaris RCH1]
          Length = 448

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 62/430 (14%), Positives = 135/430 (31%), Gaps = 21/430 (4%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L R        ++            W+   P++      G+++    V  I++   GI
Sbjct: 25  AALHRAGHPYAYLLSCAIFGVFAIFFVWAAFAPLDEVTRGQGQVIPSQRVQVIQNLEGGI 84

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNK 123
           +++  V     + +G  LL  ++            K V  +     ++ E    D +   
Sbjct: 85  LRELLVHESQIVEKGDVLLRIDNEAAESFYRDALGKSVEHQIAIARLEAELEGRDPVY-- 142

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                        +L+    +     + V+      V    ++   ++        ++ +
Sbjct: 143 -----------PAELMTEWPQVVENQADVYRARRQQVAVEQRVLEAQLHQKEQEIEEMTS 191

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +   L   L    +   + + L EK    + +    E+ V     E+             
Sbjct: 192 RKRQLEDSLRVAVEQREIARPLMEKQIYPRVEYLSLEQKVISLRGEISSLAISIPKARAA 251

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            +E  +      A    E   +L + +         L+       +  + SP+ GT+   
Sbjct: 252 ADEAKERLAFRKAQIRSEALEELNKRRGELNSLRETLSAGGDRVTRTDVRSPVRGTVKRL 311

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +     +  +P+M+IVP      I A++ P  I  +     A V+   Y        
Sbjct: 312 IINTVGGVIKPGEPIMEIVPLDDTLLIEARIRPADIAFLHPDQKAVVKITAYDYSIYGGL 371

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTT 421
           + ++E+I     +     + + YY V L+    A       + +  G  A V       T
Sbjct: 372 EGVVEQISADTIED---RKGEFYYLVKLRTRKSAIVYRGEALPIMPGMTATVDILTGKKT 428

Query: 422 LAQEIIHPIT 431
           +   ++ PI 
Sbjct: 429 VLDYLLKPIL 438


>gi|332140795|ref|YP_004426533.1| HlyD family secretion protein [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550817|gb|AEA97535.1| HlyD family secretion protein [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 436

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 60/436 (13%), Positives = 159/436 (36%), Gaps = 15/436 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            +K +    +     + +I I+G   W+    +  ++ + G++  + N  +I+    GI+
Sbjct: 10  KIKTSLKGPIVSGLTILLIFIVGATVWASSAKLASAIIAVGQLKVDSNRKQIQHLDGGIV 69

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKY 124
            +  V +G ++ +G  L+  + ++    + +      + +  R  +  E+   D  +   
Sbjct: 70  NEIIVSDGQRVKKGDTLVILDPVQAKSSLGIVAGALFTAELKRSRLQAERDNTDQPDFTR 129

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +  +          +           +F+   S      ++   ++ ++    L  E++
Sbjct: 130 FLHRE---------HEDKNSLIDAQQSLFSIRRSVQVSQQEILHQQIENLKSQILGFESQ 180

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +  +   + +L  ++NL  +  V    L + ER + +      E +    +    I
Sbjct: 181 QASTQTQIEISKDELVNLRNLKARGLVGNERLLELERNLAQLEGRAGELVSSIASAKASI 240

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E   E      ++ +++  +L+  +    D   +        +Q  + +P+ G IV   
Sbjct: 241 DEKRLELIRVKRSFHEQVLAELQDVESEIIDLQERANAATHHLQQMVVKAPVDGLIVGLN 300

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q LM+IVP +    +  +V P  +  ++ G  A V+          +  
Sbjct: 301 VHTLGGVVVPGQLLMEIVPDNDALIVEGQVLPTDVDDLRFGQNARVKLSGLQQRITPELT 360

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLA 423
             +  +       +       ++ + + I     +     +L  G PAEV       T  
Sbjct: 361 GKLMYVSADSILDER--SGMNFFIIRVSIAAEELAKLPTEQLIPGMPAEVFVQTGERTAL 418

Query: 424 QEIIHPITDNWPKIFE 439
           + ++ P++D   + + 
Sbjct: 419 EYLLQPLSDTIDRAWR 434


>gi|262273892|ref|ZP_06051705.1| membrane-fusion protein [Grimontia hollisae CIP 101886]
 gi|262222307|gb|EEY73619.1| membrane-fusion protein [Grimontia hollisae CIP 101886]
          Length = 430

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 80/436 (18%), Positives = 176/436 (40%), Gaps = 17/436 (3%)

Query: 12  NHPASLKRMTLLSI----IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N   +++R+ ++      + +     WS+  P+E +  + G +  +     ++    GII
Sbjct: 2   NEIPAIRRLVIIGFGAIALFLGTFGVWSVFSPLEGASIAPGVVTVDSQRKTVQHLEGGII 61

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKY 124
            K  V  G  + +G PL+  +  + +  ++    ++ +       + TE+     +    
Sbjct: 62  DKILVAEGVDVAKGDPLIYLDKTQASTQLEQLTTRQRNALAREARLITERDNKPDITFPD 121

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +L +    R E+LL    +        F+     + + L      +      RL++E +
Sbjct: 122 ALLMEKDNPRVEELLVNQQRIFEARRDFFDSQTEIIDKQLAQNTAELDG-QKKRLEIEKR 180

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  LS   +++   + L EK  VS+  + + ER   +    + +       + +++
Sbjct: 181 R------LSIIGEEIAGNRQLAEKGYVSKTQVLRLEREEAQILSTISQLQSNASRLQQNV 234

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E   +   +    ++EI   L ++++   +   ++   +   ++ TI +P++GT++  Q
Sbjct: 235 AENLAQLKEQELERVREIVEGLRESRQERYELDDQIAAAKDILDRTTIKAPLSGTVLNLQ 294

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
            FS        QPL+ IVP  +   I AKV P  I  V+ G  A +R    +    +  +
Sbjct: 295 VFSEEGVITPGQPLLDIVPSDESLVIEAKVDPSDIDQVRAGMKAQIRLTALSMRSVRPLE 354

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILK-ITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
             +  +       +       YY   +K I ++      IEL  G  AEV+   +  T  
Sbjct: 355 GELMTVSADRLVDEQ--SGLAYYLARVKLIDNINDILGGIELYPGMQAEVMLLTEPRTPI 412

Query: 424 QEIIHPITDNWPKIFE 439
           + ++ P+T++  + F 
Sbjct: 413 EYLLKPLTESLNRAFR 428


>gi|114706366|ref|ZP_01439268.1| putative transport protein [Fulvimarina pelagi HTCC2506]
 gi|114538227|gb|EAU41349.1| putative transport protein [Fulvimarina pelagi HTCC2506]
          Length = 451

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 71/438 (16%), Positives = 150/438 (34%), Gaps = 11/438 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +  + R          LL +    G  TW+   P+  +V + G  +       ++    G
Sbjct: 19  YAGVPRGIGKHTTFGLLLLLATFGGFGTWAFSAPLAAAVLAPGSFVATGQNKIVQHLEGG 78

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           II +  V  G Q+  G P++  ++         + LK   ++ +   +  E  A+D ++ 
Sbjct: 79  IIDEILVSEGDQVYAGQPIVKLDETAAFAKDRQLWLKHARLEAINARLLAEYEAIDRISF 138

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +   A +     ++       +      +  I    R+ +    R       R  +E
Sbjct: 139 PTILTANANDVEIADIMRSQELNFAGARAKLDTEIDLFARNTEALNFRAEGYSRQRGSVE 198

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +   LR       ++L+    L +K  +++  +N  +R + +S  ++     E      
Sbjct: 199 RQLGFLR-------EELSGKVALLKKGYINKTQVNALQRAIAESEGQIGRLSSEIDETNS 251

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I +   +     A Y +    +L+  +        +        ++ TI +P+ GTIV 
Sbjct: 252 QIAKYEQQVEQAIAAYRQAALEELQSIEAELDSVREERNNSSNILKRATIHAPVDGTIVR 311

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +S    +  +P+ +I P +    I  ++    I  VK G  A VR           
Sbjct: 312 LHYHTSGGVIESGKPIAEITPSNVPLIIEVQIPRTDIDSVKVGQEAMVRLSALNQRTTPV 371

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
               +  +         N   QE Y   +K++    +         G P +++      T
Sbjct: 372 LDGSVFYVSADALPDRMNGAAQEVYVARVKLSADELARVRGFAPTPGMPTDIMIKTAERT 431

Query: 422 LAQEIIHPITDNWPKIFE 439
               +  P+ D+  + F 
Sbjct: 432 FFDYVSKPVVDSMSRAFR 449


>gi|239947572|ref|ZP_04699325.1| alkaline protease secretion protein AprE [Rickettsia endosymbiont
           of Ixodes scapularis]
 gi|239921848|gb|EER21872.1| alkaline protease secretion protein AprE [Rickettsia endosymbiont
           of Ixodes scapularis]
          Length = 391

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 81/396 (20%), Positives = 147/396 (37%), Gaps = 17/396 (4%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HI 110
            N   I+    GII    V+ G ++ +G  L+  E+       +      +N       +
Sbjct: 1   TNKKTIQHHEGGIINAIYVKQGDKVKEGDKLIELEETRIKSEHENILGQYRNFLATENRL 60

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             E+  L+ +     +++        +++        +  +V+N    ++++++     +
Sbjct: 61  IAERDNLEQIEFSDFLMQDINLPEVAKIIHTQENLFRSRKEVYNSEKDALHQNIAQLEKK 120

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +         LE K          +Q  L  ++ L EK  V +  L  QE  V  S  ++
Sbjct: 121 IE-------GLEAKKVAASKTAEVYQDRLKALRTLKEKGFVQKAALLDQEAKVAASKSDV 173

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                E   +   I E   +   +   Y +    +L + Q   A    K   L  +  + 
Sbjct: 174 ATTEAEIAGIRHAITETQIKIINQQNKYTERTLTELREAQVQTASLKEKYNSLTDSLNRV 233

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I SP+ G +   +  +        QP+M+I P +    I AKV+ K I  V +G    +
Sbjct: 234 IIRSPVDGIVNNLKYHTIGGVISHGQPIMEISPINDPLIIEAKVSQKNIDSVHEGLVVKI 293

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFSD----NNI 403
           RF  +       F   +  I P I Q +     Q+   YY   ++I    F+      N+
Sbjct: 294 RFSAFKSRTTPTFTGKVVSISPDIVQDERQHPGQQQDNYYVARVEIDMDEFNKVAKVKNL 353

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           EL  G  AEV       TL + ++ P+TD   K F 
Sbjct: 354 ELHPGMQAEVQIVTGTRTLLRYLLDPVTDTAFKAFR 389


>gi|319785094|ref|YP_004144570.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170982|gb|ADV14520.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 445

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 70/431 (16%), Positives = 157/431 (36%), Gaps = 16/431 (3%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           PA +  + +++  GI G   W+   P+  +V +   +  + N   ++    G +K+ +V+
Sbjct: 26  PAYIGLLIIVAFFGIFG--GWAAFAPLNGAVLADAIVKVDGNRKSVQHFDGGTVKEIRVK 83

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKA 130
           +G  + +G  +L  +D       +L       LR     I  E    + +    D+L   
Sbjct: 84  DGDVVRKGDIMLKLDDTRIRSEFNLYAQQYALLRATDARIRAELDGSEVVAFPKDIL--- 140

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                ++  D+L    +          +S+  + ++   R+  +       +++     A
Sbjct: 141 -----KEHEDYLRDAMANQIADLESQRASMAGARQILERRIAELEEQIQGKQSRVESYHA 195

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L S   +   +  L +    ++  + + ER        + EN+       +   EL  +
Sbjct: 196 QLQSTINEKASLSKLLKAGLTTRPRILELERSASDLQGLIDENLGAIGGSQQSKAELESQ 255

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                     ++S  L   Q + +D + K+   +   ++  + +P  G ++    FS   
Sbjct: 256 IAQLTNERRAKLSAMLIDTQSSLSDLVPKMFAAQAAMDRAEVRAPYDGQVIDLSVFSIGA 315

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                Q ++ IVP      ++A++  + I +++    A VRF  Y           + +I
Sbjct: 316 IVSPGQTILDIVPTENSLIVQAQIRVEDISNLRPDMAAEVRFTSYKQRSIPIIHGRVSRI 375

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                          YY   + +  +  +    I L  G PA V+   +  T    I+ P
Sbjct: 376 SADRITDSKT--GFPYYLADVAVDPVELAAAPQIALYPGMPASVMIVTEERTALDYILGP 433

Query: 430 ITDNWPKIFER 440
           +  ++   F +
Sbjct: 434 LVVSFHSAFRQ 444


>gi|171058776|ref|YP_001791125.1| HlyD family type I secretion membrane fusion protein [Leptothrix
           cholodnii SP-6]
 gi|170776221|gb|ACB34360.1| type I secretion membrane fusion protein, HlyD family [Leptothrix
           cholodnii SP-6]
          Length = 468

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 73/423 (17%), Positives = 160/423 (37%), Gaps = 12/423 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + R   A  + +   +++  + L+ W+ +  I+      G+++    +  ++S   G++ 
Sbjct: 48  MSREQTARAQLIVRAAVLVTLVLLAWAAIAEIDEITRGDGKVIPSRQLQVVQSYDGGVVT 107

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G Q+ +G  LL  ++   T  +         LR  +   K+  +          
Sbjct: 108 EILVREGDQVEEGQLLLRVDETRATSGVRESAAQAFALRVRLARLKALAEGGAFLPPA-P 166

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A ++ E +++D           ++    S +   L +   ++        + + + S  
Sbjct: 167 RAGDAEELRIVD-------EERNLYQSRASELQAMLSINRQQLTQRQQELSEAQARRSSA 219

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L   +++L   + L    A+S+ ++ + +R V +S  E+ +   +   +   I E  
Sbjct: 220 QRTLELSRQELNKTRPLLASGAISEVEVLRLDRDVSRSRGEVEQLTAQIARVQASIGEAQ 279

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +      ++  E  RDL                L     +  + SP+ G +    + + 
Sbjct: 280 RKTQETELSFRNEARRDLSDVLGRLNALNQGAVALADRVSKAQVKSPVRGRVQRLLANTV 339

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q  + +++IVP      + AKV PK I  +  G  ATV+F  Y         A++E
Sbjct: 340 GGVVQPGKDIVEIVPLDDALVLEAKVQPKDIAFIHPGQAATVKFSAYDFSIYGGLDALVE 399

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I P       + +   +Y V ++ T   F D    +  G  A V       ++   ++ 
Sbjct: 400 NISPDT---QVDERGNAFYLVRVRTTQPNFGDQQ-PIIPGMTASVDILTGKKSVLSYLLK 455

Query: 429 PIT 431
           PI 
Sbjct: 456 PIL 458


>gi|254457948|ref|ZP_05071375.1| secretion protein, HlyD family [Campylobacterales bacterium GD 1]
 gi|207085341|gb|EDZ62626.1| secretion protein, HlyD family [Campylobacterales bacterium GD 1]
          Length = 460

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 144/419 (34%), Gaps = 20/419 (4%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           K +  + +  II LI W+    I+      G+I+  + +  I++   GI+ +  V+ G  
Sbjct: 47  KLLLWIGMFVIIWLIAWAYNAKIDALTRGQGKIIPSNKIQVIQNLEGGIVSELLVKEGDT 106

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESR 134
           + +G  L+  +D     +    ++    L      +  E +   F         K    +
Sbjct: 107 VKKGDILVKIDDTNFASMFIESQLRYNELEAKTIRLLAESTGNAFSAT------KEIRKK 160

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             +L+      + T  +  N  I    R L  K   ++       + + K   L    + 
Sbjct: 161 SPELIKHEFSLYRTNKEQLNNNIMIYNRRLNQKRNELK-------EAQAKLIQLTNNYTL 213

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             +++ + K L +K  VS+ +  Q +R       E+         ++  + E  D     
Sbjct: 214 ISREVALNKPLVKKGIVSEVEFLQLQRQQSTIQGEMGAIELSIPRLISVLEEQKDNIREV 273

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              +         + +             E   ++  + SP+ GTI      +     + 
Sbjct: 274 ELAFHNAAKEAYNEAKAEMTRIKRTNIAREDKVQRTFVRSPVTGTIKQLLINTVGGVVKP 333

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              +++IVP      + AK+ P  I  +  G  A V+F  Y        +  +  I    
Sbjct: 334 GMDIIEIVPTQDNLLVEAKIRPADIAFLYPGQRAIVKFSAYDFAIYGSLQGTLTHISAGT 393

Query: 375 SQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
              + +   Q YY V +K     L   D  + +  G  A+V       T+   I+ PI 
Sbjct: 394 IVDEIDK--QSYYLVRVKTDKNYLGNEDKKLNVIVGMTADVDIITGKKTVLDYILKPIL 450


>gi|298291985|ref|YP_003693924.1| type I secretion membrane fusion protein, HlyD family [Starkeya
           novella DSM 506]
 gi|296928496|gb|ADH89305.1| type I secretion membrane fusion protein, HlyD family [Starkeya
           novella DSM 506]
          Length = 456

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 77/436 (17%), Positives = 167/436 (38%), Gaps = 10/436 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            + +R          +L +  + G + W  L P+     ++G I  + +   ++    GI
Sbjct: 26  ASFRRIVRGPKLMGGVLIVTFLGGFLAWGALAPLAGGAVAAGVISPDGSRRVVQHLEGGI 85

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNK 123
           I   +V++G ++  G  L+  E ++    +  +    + L   R  +  E+     +   
Sbjct: 86  IASLEVKDGDRVTAGQTLVRLESVQPDTAMRGQLHRYRTLLAMRARLTAEQEGRAEIEFP 145

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +++        + +LD           +F    +S  R  ++   R+         LE 
Sbjct: 146 PELMATGTSDELKSVLD-------GQRTMFETRRTSDRRQREILKRRIEQSQHQIKALEA 198

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +++     L    ++L   + L +K  + ++++   ER   +      E +       + 
Sbjct: 199 QAASTSQQLELIAEELKGKRYLLQKELIRKSEVLSLERARAEIEGRRGEYLGMISRAEQQ 258

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I E   +     A    E+S  +++ +   AD   KL +      + TI +PI GT+V  
Sbjct: 259 IGETEVQLLALDAERQDEVSEQMDKVRVELADVTEKLQLTRDVLARTTIAAPINGTVVNL 318

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +     +   P++ IVP  +   I A+++P  +  V  G  A V    ++     + 
Sbjct: 319 RFKTLGGVIKAGDPILDIVPIEETLLIEARISPVDVDVVHPGLPAQVHLTAFSRWELPRI 378

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
              ++ +           QT    +V +  ++L   ++ IEL+ G PAEVL  ++  T  
Sbjct: 379 DGFVKSVSADAMVDQTTGQTYYLAKVEVDPSELEQFNDLIELQAGMPAEVLIVSRERTFL 438

Query: 424 QEIIHPITDNWPKIFE 439
             +  P  +   + F 
Sbjct: 439 DYLAEPFRNVMRRSFR 454


>gi|121593011|ref|YP_984907.1| HlyD family type I secretion membrane fusion protein [Acidovorax
           sp. JS42]
 gi|120605091|gb|ABM40831.1| type I secretion membrane fusion protein, HlyD family [Acidovorax
           sp. JS42]
          Length = 455

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 79/430 (18%), Positives = 166/430 (38%), Gaps = 13/430 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K +   + +       +G  G + W+ L P++  V   G +  +     ++    GI+++
Sbjct: 29  KHDLGRAGRWGLWALGLGFGGFLLWAALAPLDEGVPGPGVVALDTKRKAVQHLSGGIVQQ 88

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDV 126
             V  G ++ +G  L+  +        +  + S   +  ++  +  E+     +    D+
Sbjct: 89  VLVREGDEVKEGQLLIKLDAAVARANYESVRQSYLGLLAMQARLQAEQLGKPGIAWPADL 148

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E A +   +Q +    +   T   +    + S+  +++ +   ++S      + +N+ +
Sbjct: 149 KEAASDPLIQQQILNQEQLFHTRRSLLRSDLQSIEENIQGQEGLLQSYAGMLGNRKNQLA 208

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           LL        ++L  +++L ++    +N   + ER V      + +           I++
Sbjct: 209 LL-------HEELGHLRDLVKEGYAPRNRQLELERSVADVNTSIADLQGNTLRARSAISD 261

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L   A      Y KE+   L    R    +  K   +    E+  I SP  G +V     
Sbjct: 262 LRQRAISRQQEYRKEVETQLADVSRQVLVDGEKFRAVRNDLERTEIRSPADGQVVGLAVQ 321

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q  Q LM IVP      + A+V P  I  VK G    VRF  +A+  +   +  
Sbjct: 322 TVGGVVQPGQKLMDIVPKGAPLLLEARVAPHMIDRVKAGMPVDVRFSSFANSPQLVVQGA 381

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           +E +   +  +        YY   +++T + A +    +L  G P EV+F     ++   
Sbjct: 382 VESVSGDLLTE--PQSNVSYYLARVQVTGEGAKALGQRQLHPGMPVEVIFKGGERSMLTY 439

Query: 426 IIHPITDNWP 435
           ++HP+T    
Sbjct: 440 LLHPLTKRLA 449


>gi|33595653|ref|NP_883296.1| HlyD family secretion protein [Bordetella parapertussis 12822]
 gi|33600174|ref|NP_887734.1| HlyD family secretion protein [Bordetella bronchiseptica RB50]
 gi|33565732|emb|CAE36276.1| HlyD-family secretion protein [Bordetella parapertussis]
 gi|33567772|emb|CAE31686.1| HlyD-family secretion protein [Bordetella bronchiseptica RB50]
          Length = 480

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 66/402 (16%), Positives = 132/402 (32%), Gaps = 13/402 (3%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
              I+  V   G+++    V  ++S   GI+++  V  G  +  G  LL  +       +
Sbjct: 89  FGYIDEVVRGEGKVVPSRQVQIVQSLDGGIVEEILVRPGEAVETGQVLLKIDPTRFASSL 148

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
                             S L        +         E++L             +   
Sbjct: 149 GENNAEYL----------SLLAKAARLKALATGEPFVAPEKVLQEAPAIVEMERNTWQAR 198

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            S +  ++ +   +++       +   K     A      ++L + + L +  AVS+ DL
Sbjct: 199 TSELNATVNVAREQLKQREEELRETIAKRDQASASCGLTSRELQVTRPLLKSGAVSEVDL 258

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R V +   E +    +   +   I E   +      N   +   +L +     A  
Sbjct: 259 LRLQRDVARYCGEQKGAEAQIDRIGASIKEAQSKLQEAELNIRNQARSELSETNTKLATL 318

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                 L    +   I SP+ GT+    S +     Q  + +++IVP      +  +V P
Sbjct: 319 REGQAALADRVKLADIRSPVRGTVKSLFSNTVGGVVQPGKDIIEIVPTDDTLLLEVRVLP 378

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           + I  +     A V+F  Y        +  +E+I       +   +   +Y V ++    
Sbjct: 379 RDIGFLHPDQKAEVKFTAYDFAIYGGLEGHVEQIGADTVTDE---KGNSFYIVRVRTNSA 435

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
              D  + +  G  AEV       T+ Q ++ PI       F
Sbjct: 436 TLGDRKLPIIPGMVAEVHILTGKRTVLQYLLKPILRAKENAF 477


>gi|329909460|ref|ZP_08275072.1| type I secretion membrane fusion protein, HlyD family
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327546458|gb|EGF31457.1| type I secretion membrane fusion protein, HlyD family
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 465

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 70/433 (16%), Positives = 151/433 (34%), Gaps = 15/433 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L    P     +   +++ +I  + W+   PI+      G+++    V  I++   GI
Sbjct: 42  AALVTGAPRFGSLIIRGAVLFVIIAVVWAAFAPIDEITIGEGKVIPSGQVQVIQNLEGGI 101

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V  G  + Q   +L  +    +  +D      + L+  I    +           
Sbjct: 102 VSEIPVHIGELVQQNQIVLVLDKTRFSSSVDEVTAKYEALQAKIARLAAETVGSAF---- 157

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                     +LL    K      +++      +  +L +   +         +   +  
Sbjct: 158 ------VAPPELLRANPKIVEEEKQLYQNRQRELESALTVLREQANQRTQELREKRARMV 211

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L        ++LT+ K +  +  +S+ ++ + ER V     E          + + I E
Sbjct: 212 QLEESQRLVTRELTISKPMVAQGVLSEVEVLRLERQVSDFRGEAEAARLAIPRIEQSIAE 271

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            + + N + A +  + + +L   +  F    +    +     +  I SP+AG +   +  
Sbjct: 272 AHAKENGQLAKFRSDAATELNLARSEFEQSRASGVAMADRLARTEIRSPVAGLVKTLKVS 331

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    LM+IVP +    I A+V P  +  +  G  ATV+   Y         A 
Sbjct: 332 TVGGVIQPGMDLMEIVPIANNLLIEARVRPADVAFLHPGQHATVKLSAYDFSIYGGLDAT 391

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E I       D     + +Y+V ++ +   L   D N+ +  G  A +       T+  
Sbjct: 392 LENITADSITNDE---GESFYQVRVRTSRNNLGSGDKNLPIIPGMTATIHIRTGKKTVLN 448

Query: 425 EIIHPITDNWPKI 437
            ++ P+     + 
Sbjct: 449 YLLKPVIKAKQEA 461


>gi|46448845|gb|AAS95498.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio vulgaris str. Hildenborough]
          Length = 429

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 62/430 (14%), Positives = 135/430 (31%), Gaps = 21/430 (4%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L R        ++            W+   P++      G+++    V  I++   GI
Sbjct: 6   AALHRAGHPYAYLLSCAIFGVFAIFFVWAAFAPLDEVTRGQGQVIPSQRVQVIQNLEGGI 65

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNK 123
           +++  V     + +G  LL  ++            K V  +     ++ E    D +   
Sbjct: 66  LRELLVHESQIVEKGDVLLRIDNEAAESFYRDALGKSVEHQIAIARLEAELEGRDPVY-- 123

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                        +L+    +     + V+      V    ++   ++        ++ +
Sbjct: 124 -----------PAELMTEWPQVVENQADVYRARRQQVAVEQRVLEAQLHQKEQEIEEMTS 172

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +   L   L    +   + + L EK    + +    E+ V     E+             
Sbjct: 173 RKRQLEDSLRVAVEQREIARPLMEKQIYPRVEYLSLEQKVISLRGEISSLAISIPKARAA 232

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            +E  +      A    E   +L + +         L+       +  + SP+ GT+   
Sbjct: 233 ADEAKERLAFRKAQIRSEALEELNKRRGELNSLRETLSAGGDRVTRTDVRSPVRGTVKRL 292

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +     +  +P+M+IVP      I A++ P  I  +     A V+   Y        
Sbjct: 293 IINTVGGVIKPGEPIMEIVPLDDTLLIEARIRPADIAFLHPDQKAVVKITAYDYSIYGGL 352

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTT 421
           + ++E+I     +     + + YY V L+    A       + +  G  A V       T
Sbjct: 353 EGVVEQISADTIED---RKGEFYYLVKLRTRKSAIVYRGEALPIMPGMTATVDILTGKKT 409

Query: 422 LAQEIIHPIT 431
           +   ++ PI 
Sbjct: 410 VLDYLLKPIL 419


>gi|192289965|ref|YP_001990570.1| type I secretion membrane fusion protein, HlyD family
           [Rhodopseudomonas palustris TIE-1]
 gi|192283714|gb|ACF00095.1| type I secretion membrane fusion protein, HlyD family
           [Rhodopseudomonas palustris TIE-1]
          Length = 440

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 73/434 (16%), Positives = 154/434 (35%), Gaps = 14/434 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R+   +        +I       W++  P+  +V +  +++ + NV  ++ P  G++ + 
Sbjct: 16  RDIWRAAGLGIATLVIVASTAGVWAMTAPLASAVIAPAQVVVDSNVRRVQHPTGGVVAEI 75

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVL 127
            V +G ++  G  L   ++      + L +  +  L   R  + +E++  D L    ++ 
Sbjct: 76  YVNDGDEVRAGDMLARLDETMPRANLALIENQLNQLVVRRARLQSEQNGNDTLALPAEIA 135

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +   +   +++D         + +F     ++         R   I      LE +   
Sbjct: 136 ARRNVAAIAEMID-------GETTLFVRRRDAISGQQSQLRERKAQIADEIRGLEAQIVS 188

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            R  +   Q +L  ++ L+EKN V    L   ER   + T E  + I E       I E 
Sbjct: 189 KREQIRWIQTELEGVRQLYEKNLVPYARLTALEREASRLTGEEGQLIAEIARARGRITET 248

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +      +  +E++ +L   +    D   +        E+  + +P  G +      +
Sbjct: 249 ELQILQLVQDQRREVATELRDVETKITDLGERRIAALDQLERVVLRAPQDGLVHQKSVHT 308

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                   + LM IVP      + AKV P+ I  +K G  A +RF  +      +    +
Sbjct: 309 VGGVISAGEQLMLIVPKDS-LVVEAKVDPQMIDRLKVGQPAKLRFSAFDAAVTPELDGTL 367

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEI 426
            ++   +++         YY   + +T       +   L  G P E        T    +
Sbjct: 368 TRVAADLTKDQQ--SGAAYYVARISLTPSELGKLDGKALVPGMPVEAFIQNGMRTAFAYL 425

Query: 427 IHPITDNWPKIFER 440
             P+ D   +   +
Sbjct: 426 RKPLEDQLARAMRQ 439


>gi|77457687|ref|YP_347192.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           fluorescens Pf0-1]
 gi|77381690|gb|ABA73203.1| HlyD-family secretion protein [Pseudomonas fluorescens Pf0-1]
          Length = 453

 Score =  309 bits (791), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 59/423 (13%), Positives = 145/423 (34%), Gaps = 15/423 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           ++ P   +    L+   +I  + W+    ++      G+ +    V  I++   GI+ + 
Sbjct: 34  QDSPRWSRITVWLAAALLISALVWAKFAVLQEVTMGEGKAIPSSKVQVIQNLEGGIVTEI 93

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G  + +G  LL  +D          +     L   ++   +  +    K       
Sbjct: 94  FVREGQMVDKGDKLLRLDDTRFLSNKGESEADRYALTAQVERLSAEAEGRPFKLS----- 148

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                ++++    +       ++      +    +    ++R       +  +K     +
Sbjct: 149 -----DEVIAKAPQVAEDERSLYEQRQRRLASEQRTLSEQLRQKTQELAEFRSKQGQYSS 203

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L+   +++ M + L +  AVS  ++ + +R   +    L             I E+  +
Sbjct: 204 SLALVNQEMNMSEPLVKTGAVSPVEILRLKRSAVEIRGSLNATTLAIPRAESAIAEIRSK 263

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            +     +  E +++L + +   +   +    ++    + T+ SP+ G I   +  +   
Sbjct: 264 IDESEQTFRSEAAKELNEKRTDLSKITASSIAIDDRVSRTTVTSPVHGVIKQMKVNTIGG 323

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q    +++IVP      I AKV P+ +  +  G  A V+F  Y         A +E I
Sbjct: 324 VVQPGSDMVEIVPLEDNLLIEAKVRPQDVAFLHPGQKAMVKFSAYDYTIYGGLSAKLELI 383

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                  D   +   +Y + ++            + +  G  A V       ++   ++ 
Sbjct: 384 GADTITDD---KGNSFYLIQVRTDKNHLGGDVKPLLIIPGMVATVDIITGEKSVLDYLLK 440

Query: 429 PIT 431
           P+ 
Sbjct: 441 PVL 443


>gi|90411762|ref|ZP_01219771.1| type I secretion membrane fusion protein, HlyD [Photobacterium
           profundum 3TCK]
 gi|90327324|gb|EAS43688.1| type I secretion membrane fusion protein, HlyD [Photobacterium
           profundum 3TCK]
          Length = 432

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 84/434 (19%), Positives = 164/434 (37%), Gaps = 16/434 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +    +    +  I+ + G I W+    +  +  +SG ++ E    +++    G +K   
Sbjct: 7   DTNRLIWVGCIFIILAVGGFILWATTAKLSSASVASGTLVVESQRKKVQHLEGGWVKAIY 66

Query: 72  VENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           V  G ++  G  L+   +           L+ VS++     + TE S    L       +
Sbjct: 67  VSEGQKVKVGDVLVELANSRAESDFRRLILRAVSLQAQHDRLSTELSNRKDLVWSNLFFD 126

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRLDLENKSS 186
           +  E +   +++         S+   Y  S ++  L+    + R   +         + S
Sbjct: 127 EVEEGQLANIIN---------SQQLQYQQSVLHEELREGQYQQRKVLLQEQIRGTGFQLS 177

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            ++  L    +++ M  +L +K  VS+  + + +R       +  E   E + + + +  
Sbjct: 178 AIQRQLDLANEEIQMTMSLLKKGFVSKTRVLEIKRYHAGIDAQKAELEGESEVLTQQLLS 237

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L      E   + + ++  LEQ+++   D    L      RE+  I S   GT+V     
Sbjct: 238 LKQGHKSEIIEFKQGLTAQLEQSEKELRDVKQALKSARDVRERVKIRSEHTGTVVGLNVH 297

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S          +M+IVP S    + A V P+ I  V++G TA VR   Y   R    +  
Sbjct: 298 SVGGVVNAGDVIMEIVPDSDALIVEAVVKPEDIDVVRQGLTAKVRLSAYNIRRTPPVQGE 357

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQE 425
           +  +     Q   +      Y V +K+         NIEL  G P EV    ++ TL   
Sbjct: 358 VIYVAADRLQPRTDNSPTG-YVVKVKLDSDEIKILGNIELYPGMPTEVFILLEDKTLWDY 416

Query: 426 IIHPITDNWPKIFE 439
           +  P+  ++ + F 
Sbjct: 417 LTAPLFSSYYRAFR 430


>gi|163747809|ref|ZP_02155148.1| type I secretion membrane fusion protein, HlyD family [Oceanibulbus
           indolifex HEL-45]
 gi|161378917|gb|EDQ03347.1| type I secretion membrane fusion protein, HlyD family [Oceanibulbus
           indolifex HEL-45]
          Length = 446

 Score =  308 bits (790), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 74/438 (16%), Positives = 159/438 (36%), Gaps = 11/438 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +  + R+    +     L +    G   W+   P+  +V S G  +   +   ++    G
Sbjct: 14  YDEVPRSITRQVIFGISLLVFAFGGFGLWAFKAPLAAAVISQGSFVATGSNKIVQHLEGG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           IIK+  VE G  +  G PLL  ++     T   + L++V ++ +   I  E S  D L  
Sbjct: 74  IIKEILVEEGQDVEAGQPLLLLDETSALATERELFLRQVRLEAMEARILAEYSQKDVLAY 133

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              + +   +     +LD         ++     ++ + +S+     R +         E
Sbjct: 134 PLHLEKLRSDFNIASMLDGQEIVFDAATRQLQNDVNLLQQSINGLKERAQ-------GYE 186

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            + +  +  L    +D    + L  K  + + + N   R + ++T ++     E K    
Sbjct: 187 QQLNATKIQLEILIEDSEAKEILLNKGLIRRTEYNTLRRAMAEATGQIGRLESEIKETQA 246

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                  +              +L+  Q        +    +    +  I++P++GT+V 
Sbjct: 247 LSMRYESQIEQTIDERQAAALDELQVVQSELESIREQTRKAQGILHRAEIVAPVSGTVVR 306

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               ++    +  + +++I+P  +   I  ++   +I  V+KG  ATVR           
Sbjct: 307 MHYHTAGGVIESGKAILEILPTGEPLIIEVQIPRAEIDVVRKGQEATVRLTALNQRTTPI 366

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
            +  +  +         N   QE Y   + +               G PAE++ T ++ T
Sbjct: 367 LEGQVYYVSADAILDRANDVPQEIYVARVSVPPRELDRVRGFTPTPGMPAEIMITTQDRT 426

Query: 422 LAQEIIHPITDNWPKIFE 439
             Q ++ P+TD+  + F 
Sbjct: 427 FIQYLMKPVTDSMIRAFR 444


>gi|170722974|ref|YP_001750662.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida W619]
 gi|169760977|gb|ACA74293.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida W619]
          Length = 451

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 66/435 (15%), Positives = 157/435 (36%), Gaps = 18/435 (4%)

Query: 2   HHFM---WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE 58
           H +M        ++ P   +    L+   ++  + W+ L  ++      G+ +    V  
Sbjct: 20  HDYMPELASATLQDSPRLSRLTVWLAAALLLAAVIWASLAVLDEVTVGEGKAIPSSKVQV 79

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GI+ +  V  G  + +G  LL  +D          +     L   ++   +  +
Sbjct: 80  VQNLEGGIVTEIFVREGQMVDKGATLLRLDDTRFKSNKGESEADRYALTAQVERLSAEAE 139

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                  VL +   ++  Q+ +     + +  +       ++   L       R      
Sbjct: 140 GRPF---VLSEEVRAKAPQVAEDELSLYDSRQRRLASEKQTLNEQL-------RQKTQEL 189

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            +  +K    R+ +   Q++L M   L  K A+S  ++ + ++   ++  +L        
Sbjct: 190 AEFRSKVEQYRSAVGLLQQELNMSAPLVSKGAISPVEILRLKQRTVEARGQLNATSLAIP 249

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + E+  +     A++  E +++L   +   +   +    ++    + T++SP+ G
Sbjct: 250 RAEAAVAEIRSKIQESDASFRSEAAKELNDKRTELSKITATSIAIDDRVNRTTVVSPVHG 309

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   +  +     Q    L++IVP      I AKV P+ +  +  G  A V+F  Y   
Sbjct: 310 IVKMLKVNTIGGVVQPGSDLVEIVPIEDNLLIEAKVRPQDVAFLHPGQPAMVKFSAYDYT 369

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFT 416
                KA +E I       D   +   +Y + ++        +N  + +  G  A V   
Sbjct: 370 IYGGMKAKLELISADTVTDD---KGNAFYLIQVRTEKNHLGGDNKPLLIIPGMVATVDII 426

Query: 417 AKNTTLAQEIIHPIT 431
               ++   ++ P+ 
Sbjct: 427 TGQKSVLDYLLKPVL 441


>gi|254474779|ref|ZP_05088165.1| type I secretion membrane fusion protein, HlyD [Ruegeria sp. R11]
 gi|214029022|gb|EEB69857.1| type I secretion membrane fusion protein, HlyD [Ruegeria sp. R11]
          Length = 434

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 74/438 (16%), Positives = 159/438 (36%), Gaps = 9/438 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M      +    L    +  ++ I G  TWS+   I  ++ +SG I  + N   ++    
Sbjct: 1   MNSQQTWSARRPLIVGVIGVLVLIGGFGTWSVATSIAGAIVASGRIEVDRNRQVVQHLDG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLN 121
           GI++  +V+ G  +  G  LL  +  E    + + +  +  L   R  ++ E+   + + 
Sbjct: 61  GIVQDIRVDEGDTVESGQILLQLDARELRSQLAITEGQLFELIARRARLEAERDRAETIT 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              ++   A  S +      +       +++F     SV R ++    R   I      +
Sbjct: 121 FDPELETAARNSAD------VRDLMQGQTRLFLARRDSVAREIEQLEKRRAQISNQITGI 174

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + + +  R  L   ++ L   ++L ++       +   +R        L E I  +    
Sbjct: 175 QAQQASRRTQLELIREQLENQQSLLDRGLAQAGTVLSLQRSEADLQGSLGELIASEAQAE 234

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I E+  E         +E    L   +    +       L    E+  I +P++G + 
Sbjct: 235 GRITEIDIEILKLGTRQREEAISRLRDLRYQELELAETRRTLLDRLERLDITAPVSGVVY 294

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             Q  +  +  + ++P++ IVP  +   I A+V P  +  +  G   T+RFP        
Sbjct: 295 GLQVHTPRSVIRAAEPVLYIVPQDRPLVIAAQVAPTDVDQIFVGQPVTLRFPALDQRSTP 354

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           +    ++++     +  N   +    E+ L    +        L  G P E      + +
Sbjct: 355 ELFGAVQQVSADAFEDPNTGISYYRTEIALDPGQIDRLPEGTALIPGMPVEGYIRTADRS 414

Query: 422 LAQEIIHPITDNWPKIFE 439
               ++ P+TD + + F 
Sbjct: 415 PLAYLVKPLTDYFVRAFR 432


>gi|260460126|ref|ZP_05808379.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium opportunistum WSM2075]
 gi|259034337|gb|EEW35595.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium opportunistum WSM2075]
          Length = 444

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 73/440 (16%), Positives = 157/440 (35%), Gaps = 16/440 (3%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M        PA L  + +++  GI G   W+   P+  +V +   +  E N   ++    
Sbjct: 16  MLAPDSIRVPAYLGLLIIIAFFGIFG--GWAAFAPLNGAVLADAIVKVEGNRKSVQHFDG 73

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLN 121
           G +K+ +V++G  + +G  +L  +D       +L       LR     I  E    + + 
Sbjct: 74  GTVKEIRVKDGDVVRKGDIMLKLDDTRIRSEFNLYAQQYALLRATDARIRAELDGSEAVA 133

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              D+L        ++  D+L    +          +S+  + ++   R+  +       
Sbjct: 134 FPKDIL--------KEHEDYLRDAMANQIADLESQRASMAGAKQILERRIAELEEQIQGK 185

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +++    +A L S   +   +  L +    ++  + + ER        + EN+       
Sbjct: 186 QSRVESYQAQLQSTVDEKASLSKLLKAGLTTRPRILELERSASDLQGLIDENLGAIGGSR 245

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           +   EL  +          ++S  L   Q   AD + K+   +   ++  + +P  G ++
Sbjct: 246 QSKAELESQIAQLTNERRAKLSAMLIDTQSNLADLVPKMFAAQAAMDRAEVRAPYDGQVM 305

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
               FS        Q ++ IVP      ++A++  + I +++    A VRF  Y      
Sbjct: 306 DLSVFSIGAIVAPGQTILDIVPTENSLIVQAQIRVEDISNLRPDMAAEVRFTSYKQRSIP 365

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNT 420
                + +I               YY   + +     +    I L  G PA V+   +  
Sbjct: 366 IIHGRVTRISADRITDSKT--GFPYYLADVAVDPGELAAAPQIALYPGMPAAVMIVTEER 423

Query: 421 TLAQEIIHPITDNWPKIFER 440
           T    ++ P+  ++   F +
Sbjct: 424 TALDYVLGPLVVSFHSAFRQ 443


>gi|99082318|ref|YP_614472.1| Type I secretion membrane fusion protein, HlyD [Ruegeria sp.
           TM1040]
 gi|99038598|gb|ABF65210.1| Type I secretion membrane fusion protein HlyD [Ruegeria sp. TM1040]
          Length = 440

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 69/429 (16%), Positives = 159/429 (37%), Gaps = 13/429 (3%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           +L    L  II + G  TW++   I  +V +SG+I  + N   ++    G+++   V+ G
Sbjct: 18  ALIAGALGVIILLGGFGTWAVFSNIAGAVVASGQIEVDRNRQVVQHIDGGVVEDILVDEG 77

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             +  G  L+  + ++    + + +  +      R  ++ E+  +D ++   ++L  A  
Sbjct: 78  DLVTAGQTLVRLDAVDLRSQLTITEGQLFEMMARRGRLEAERDEVDTISFDAELLTLA-- 135

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
               Q    + +     +++F     SV R ++    R   I      +  +    R  L
Sbjct: 136 ----QQRPEVAELVEGQARLFRARRESVRREVEQLEKRAVQIEDQITGVRAQQEATREQL 191

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              +++L+  ++L ++     + +    R        L E I  +      I E+  EA 
Sbjct: 192 VLIKEELSNQQSLLDRGLAQASVVLNLRRNQANLQGTLGELIASEAQARGRITEIEIEAL 251

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                  +E    L   +    + +     L     +  I +P++G +      +  +  
Sbjct: 252 KLRNQRREEAITRLRDLRYRELELIETRRSLIDRLGRLDITAPVSGVVYGMSVRTPRSVI 311

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           + + P++ +VP  +   I A+V P  I  +  G   ++R P     +  +    +     
Sbjct: 312 RPADPVLYLVPQDRPLVIAARVAPTDIDQIHVGQAVSIRLPALDQRQTPELFGSVTLFSA 371

Query: 373 IISQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              Q +       YY   +++   ++        L  G P E      + +    ++ P+
Sbjct: 372 DAFQDETT--GASYYRAEIELNAGEMDRLPEGTVLIPGMPVESFIRTADRSPLAYLVKPL 429

Query: 431 TDNWPKIFE 439
           +D + + F 
Sbjct: 430 SDYFVRAFR 438


>gi|294678908|ref|YP_003579523.1| hemolysin D [Rhodobacter capsulatus SB 1003]
 gi|294477728|gb|ADE87116.1| type I secretion membrane fusion protein, HlyD family [Rhodobacter
           capsulatus SB 1003]
          Length = 488

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 68/433 (15%), Positives = 165/433 (38%), Gaps = 11/433 (2%)

Query: 11  RNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           R  P     +  +++ + + G   WS++  I  +V +SG+I  + +   ++ P  G++ +
Sbjct: 61  RISPRVALLIGYVTLAVLVGGFGLWSVVSSIAGAVIASGQIEVDQHRQVVQHPDGGVVAE 120

Query: 70  FQVENGSQILQGTPLLTFED---IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
             V  G  +  G  L+  +         +++ +   +   R  ++ E++    +    ++
Sbjct: 121 IHVHEGDSVSAGQLLIRLDGDLVRSERAIVEGQFFELLARRGRLEAERADAPEIRFHPEL 180

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           LE A      Q    + +      ++F     ++ ++L     R          +E +  
Sbjct: 181 LEAA------QTRPDVAELVEGQRRLFEARAQTLRKALDQVTKRAEQTQAQIGGIEAQRI 234

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                 +   ++L   + L +K     + +   +R       E+   + ++      + E
Sbjct: 235 ATEEQEALIARELADQQQLLDKGLAQASRVLALQREAASLAGEVGALVAQKAQAEGKVTE 294

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  EA    +   ++   +L        +   +   L +  E+  + +P+ G +      
Sbjct: 295 LDLEALRLTSQRREDAETELRDIGYRELELAERRRSLTEQIERLDMRAPVGGIVYAMTVT 354

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     + ++P++ IVP  +   + A+++P  I  V+ G    +RFP +A     +    
Sbjct: 355 TPRAVIRAAEPVLYIVPQDRPLLVAARISPINIDEVRIGQPVALRFPAFASRTTPELFGQ 414

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           + +I       + +  +    EV+L   + A     ++L  G PAEV     + +    +
Sbjct: 415 VTQISADALIDEASRLSYFRAEVMLNPGE-ADKLGALQLLPGMPAEVYIRTGDRSPLAYL 473

Query: 427 IHPITDNWPKIFE 439
             P TD + + F 
Sbjct: 474 TKPFTDYFTRAFR 486


>gi|122042281|gb|ABM65823.1| MadC [Mesorhizobium sp. R88B]
          Length = 445

 Score =  308 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 76/431 (17%), Positives = 157/431 (36%), Gaps = 16/431 (3%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           PA +  + +++  GI G   W+ L P+  +V +   +  E N   ++    G +K+ +V+
Sbjct: 26  PAYVGLLIIVAFFGIFG--GWAALAPLNGAVLADAIVKVEGNRKSVQHFDGGTVKEIRVK 83

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKA 130
           +G  + +G  +L  +D       +L       LR     I  E      +    D+L   
Sbjct: 84  DGDVVRKGDIMLKLDDTRIRSEFNLYAQQYALLRATDARIRAELDGSAAVAFPKDIL--- 140

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                ++  D+L    +          +S+  + ++   R+  +       +++    RA
Sbjct: 141 -----KEHEDYLRDAMANQIADLESQRASMAGARQILERRIAELEEQIQGKQSRVESYRA 195

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L S   +   +  L +    ++  + + ER        + EN+       +   EL  +
Sbjct: 196 QLQSTIDEKASLSKLLKAGLTTRPRILELERSASDLQGLIDENLGAIGGSQQSKAELESQ 255

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                     ++S  L + Q   AD + K+   +   ++  + +P  G ++    FS   
Sbjct: 256 IAQLTFERRAKLSAMLIETQSNLADLVPKMFAAQAAMDRAEVRAPYDGQVMDLSVFSIGA 315

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                Q ++ IVP      ++A+V  + I +++    A VRF  Y           + +I
Sbjct: 316 IVSPGQTILDIVPTENSLIVQAQVRVEDISNLRPDMAAEVRFTSYKQRSIPIIHGRVTRI 375

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                          YY   + +     +    I L  G PA V+   +  T    II P
Sbjct: 376 SADRITDSKT--GFPYYLADVAVDPGELAAASQIALYPGMPASVMIVTEERTALDYIIGP 433

Query: 430 ITDNWPKIFER 440
           +  ++   F +
Sbjct: 434 LVVSFHSAFRQ 444


>gi|326794784|ref|YP_004312604.1| type I secretion membrane fusion protein, HlyD family [Marinomonas
           mediterranea MMB-1]
 gi|326545548|gb|ADZ90768.1| type I secretion membrane fusion protein, HlyD family [Marinomonas
           mediterranea MMB-1]
          Length = 444

 Score =  308 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 71/427 (16%), Positives = 153/427 (35%), Gaps = 15/427 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L    P   + +  +  + +   + W+    ++      G ++    +  +++   GI
Sbjct: 21  AALMLKTPRGGRIILWVIFLFLTAGVIWAHYAELDEVTVGEGTVIPSSQLQVVQNLEGGI 80

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K+     G ++ +G  L+  E+ E    +  ++V   NL        +     + ++  
Sbjct: 81  LKEIATRIGQKVERGQLLMIIENTEALSSLREQQVESFNLDARAQRLAAEASGKDPEFS- 139

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                    +++ D           ++N  ++S+  + ++   ++       ++ E K  
Sbjct: 140 ---------DEIKDAYPNIIDREEALYNNRLASLRANQQVFKQQIDQKKQEVIEQEAKLV 190

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LR      +++L + +  FE+ AVS+ +L Q  R V     ++             + E
Sbjct: 191 NLRDSYELAEEELALTEPAFEQGAVSRVELLQLRRQVNTLRGDMEATELAIPRARSSLKE 250

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++     A +  E   DL + +            LE    +  + SP+ G +   Q  
Sbjct: 251 AENKLKEVDAKFRAEAQEDLTKVKGKLDQIRESSVSLEDKVSRTQVRSPVKGIVKQIQIN 310

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +    L++IVP      I AKV P+ I  +K G  A V+   Y        +A 
Sbjct: 311 TVGGVIKPGMNLVEIVPLEDSLLIEAKVRPEDIGFIKPGLPAVVKLTAYDFAVFGGLQAR 370

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E I       +       +Y V ++     L   D  + +  G  A V       +L  
Sbjct: 371 VETISADTILDEE---GNSFYAVRVRTDKSYLGTEDRPLPIIPGMQAGVDVITGKKSLLD 427

Query: 425 EIIHPIT 431
            ++ PI 
Sbjct: 428 YLLKPIL 434


>gi|289208493|ref|YP_003460559.1| hemolysin D [Thioalkalivibrio sp. K90mix]
 gi|288944124|gb|ADC71823.1| type I secretion membrane fusion protein, HlyD family
           [Thioalkalivibrio sp. K90mix]
          Length = 474

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 152/428 (35%), Gaps = 14/428 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +  P   + +    +I +  L+ W+ +  I+    + G ++   N+  ++S   G++ + 
Sbjct: 58  QERPIRARALLYGILITLGLLVYWASVAEIDEVARADGRVIPSQNLQVLQSMDGGVVSEV 117

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G  + QG  L+  +       +   + S   L+       + L             
Sbjct: 118 LVREGDVVEQGDVLVRVDPTRFLSDLGEARASEFALKARRARLMALLTETPFLIT----- 172

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                  L +          +++   +  +   +++   +MR       ++  + S    
Sbjct: 173 -----PDLQEGPQAIVEQEQQLYEESLDELRSRIRIAEEQMRQRREELNEVRARRSQAIR 227

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L    ++L + + L +  AVS+ ++ +  R V  +  +  +   +   +   I E  ++
Sbjct: 228 ALELASRELEVTEPLVQSGAVSEVEILRLRREVSNARGDRDQATAQIARLDAAIEEAEEK 287

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                 N+  +   +L        +       LE       + SP+AG +      +   
Sbjct: 288 IREVRLNFRNQWRSELADTLGRLQELAEGTEGLEDRVRLSEVRSPMAGIVQRMFITTRGG 347

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                + + ++VP      I A+V+P+ I +++ G  A V+F  Y         A +E I
Sbjct: 348 VISPGREVAEVVPLEDELLIEARVSPRDIAYLRPGLNAKVKFTAYDFAIYGGLDATVEHI 407

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            P     D+      YY+V ++  +  F D    +  G   +V       T+ Q ++ PI
Sbjct: 408 SPDTITDDD---GNTYYKVRVRTEETGF-DEEHPIMTGMVTQVDIITGRRTILQYLLKPI 463

Query: 431 TDNWPKIF 438
                  F
Sbjct: 464 LRAGELAF 471


>gi|254466904|ref|ZP_05080315.1| type I secretion membrane fusion protein, HlyD [Rhodobacterales
           bacterium Y4I]
 gi|206687812|gb|EDZ48294.1| type I secretion membrane fusion protein, HlyD [Rhodobacterales
           bacterium Y4I]
          Length = 434

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 72/435 (16%), Positives = 160/435 (36%), Gaps = 11/435 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N     P  +  +TLL ++G  G  +WS+L  I  +V +SG I  + N   ++    GI+
Sbjct: 6   NWSAQRPLIIGLITLLVLVG--GFGSWSVLSSISGAVVASGRIEVDRNRQVVQHLDGGIV 63

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKY 124
            +  V+ G  + +G  L+  +  E T  +   + +   +   R  ++ E+     +    
Sbjct: 64  AEILVDEGDTVQEGDTLIRLDANELTSQLVITEGQLFELMARRGRLEAERDEAADITFDE 123

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++LE      + Q             ++F    ++  R ++    R   I      ++ +
Sbjct: 124 ELLEAVETQPDVQ------DLVEGQQRLFQARRATTAREIEQLEKRRVQIEEQIRGIQAQ 177

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              ++  L    ++L+  ++L ++       +    R       +L E +  +      I
Sbjct: 178 QQSMKVQLELINEELSNQQSLLDRGLAQAATVLNLRRTQANLEGQLGELVAAEAQAEGRI 237

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E+  E         +E    L   +    +       L +  E+  I +P++G +   Q
Sbjct: 238 TEIDIEILKLATGQREEAITRLRDLRTQEVELAETRRSLRQRLERLDITAPVSGIVYGMQ 297

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +  +  + + P++ +VP  +   I A+V P  I  +  G   T+RF         +  
Sbjct: 298 VQTPRSVIRPADPVLYLVPQDRPLVIAAQVAPTDIDQLYTGQEVTLRFSALDQRSTPELF 357

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             + ++     +   +  +    E+ L   +         L  G P E      + +   
Sbjct: 358 GHVTQVSADAFEDQGSGVSYYRAEIELDPGERERLPEGTVLIPGMPVESYIRTADRSPLA 417

Query: 425 EIIHPITDNWPKIFE 439
            ++ P++D + K F 
Sbjct: 418 YLVKPLSDYFVKAFR 432


>gi|222087759|ref|YP_002546296.1| protein secretion protein [Agrobacterium radiobacter K84]
 gi|221725207|gb|ACM28363.1| protein secretion protein [Agrobacterium radiobacter K84]
          Length = 436

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 75/438 (17%), Positives = 163/438 (37%), Gaps = 14/438 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
             L  +    L  + + +II ++G L   +  + ++ +V ++G ++ +  V  ++    G
Sbjct: 6   APLAEHAIRRLTFVAITAIIFLVGVLGGLAATIRLQGAVIAAGTLVVDSYVKPVQHQKGG 65

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNN 122
            + +  V+NG ++  G  L+  +D +    + +   +   +      +  E+ + + +  
Sbjct: 66  TVGQVFVKNGDRVEPGQILIHLDDTQARANLAIVSKRLKELAARTARLSAERDSKEDITF 125

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +L++        +LD          ++F+   SS          R+R +      L 
Sbjct: 126 PEGLLKEREIVEVAAMLD-------GEQRLFHDRRSSKMGRKAQLAERVRQLSKEAEGLS 178

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +    R  ++   K+LT ++ L ++  +    +   +R     T EL   I        
Sbjct: 179 AQQDGKRQAIAIINKELTSLQPLLDQGIIPATRVYNLQRDAADLTGELGSLIASAAQTNG 238

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I E   +      +   E+S  L Q +    +   +    E       I +P AG +  
Sbjct: 239 KIAETQLQIIQVDDDQRTEVSDQLRQAESEIGEYSERFVAAEDELRHIDIRAPQAGIVHQ 298

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +S      S+ +M+IVP + +     K++P+ I  V  G   T+RF  +      +
Sbjct: 299 LAVHASGAVVTPSEAIMQIVPDNDVLTPELKLSPQDIDQVVVGQDVTLRFSAFNQRTTPE 358

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
               I +I   ++      Q   YY + + ++   ++   N+    G P E        T
Sbjct: 359 LSGRITRIAADLTTDQRTGQG--YYSLRVAVSATEWARLGNLAPVVGMPVEAFIQTGERT 416

Query: 422 LAQEIIHPITDNWPKIFE 439
               +  P+TD   + F 
Sbjct: 417 ALAYLAKPLTDQMARAFR 434


>gi|260430742|ref|ZP_05784714.1| type I secretion membrane fusion protein, HlyD family [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260418183|gb|EEX11441.1| type I secretion membrane fusion protein, HlyD family [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 435

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 72/434 (16%), Positives = 160/434 (36%), Gaps = 14/434 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +   PA++  + L  ++G  G+  WS    +  ++ S G +  + N   I+ P  G++ +
Sbjct: 11  RITLPAAVGFIALAILVG--GIGVWSTKTHLAGAIVSQGVVEVQSNRQVIEHPDGGVVGE 68

Query: 70  FQVENGSQILQGTPLLTFEDI---ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
             V +G  + +G  LL  +         +I+ +   +   +  ++ E+   D    + D 
Sbjct: 69  LFVRDGDSVSRGDLLLRLDGTFLASEKTIIESRLFELLARKVRLEAERDGADA--AELDA 126

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
              A    E    D +         +F    +++ + ++    +   I       + + +
Sbjct: 127 QMDALTEIEPIGADLI----EGQKNLFLARSNTLTQKIEQLSKQRIQIESEIEGTQAQLA 182

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LR  +     +L   K L  K     + ++  +R   + T ++         +   I  
Sbjct: 183 ALRKQVELIGNELADQKGLLAKGLTQASRVSALQREEARLTGDIGRLEATVARLKGQIAT 242

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +     +   ++   +L   Q   A+   +   L +   +  I +P+ GT+  NQ F
Sbjct: 243 TEIQIVELTSTRREQAIGELRDVQAQVAELSQRRLSLVERLSRLEIRAPVDGTVFGNQVF 302

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           ++ +  Q  +P+M +VP      + A+V    +  +  G   T+RFP +      + +  
Sbjct: 303 AAQSVVQPGEPMMYLVPEDTPLLVAARVDAIHVDQLYVGQPVTLRFPAFNQRETPEIEGH 362

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  +       +       +Y   +   +      N   L  G PAE L      T    
Sbjct: 363 VINVSADTLTDETT--GFTFYRAEIVPDEGQLERLNGQNLLPGMPAEALIKTDERTPLSY 420

Query: 426 IIHPITDNWPKIFE 439
           ++ P+TD + + F 
Sbjct: 421 LVKPMTDYFNRAFR 434


>gi|288939994|ref|YP_003442234.1| type I secretion membrane fusion protein, HlyD family
           [Allochromatium vinosum DSM 180]
 gi|288895366|gb|ADC61202.1| type I secretion membrane fusion protein, HlyD family
           [Allochromatium vinosum DSM 180]
          Length = 438

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 77/410 (18%), Positives = 159/410 (38%), Gaps = 13/410 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ L PI  +  +SG +  E     ++    G++ +  V  G ++ +G  L+  +D E +
Sbjct: 36  WAFLAPINGAAVASGVVAVESARKIVRHLDGGVVSEILVREGDRVEEGEVLVRLDDTEAS 95

Query: 94  DLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             +++ +     LR     +  E+  L  +    +++    + R  + +       +   
Sbjct: 96  ARLEIARGQYLALRAQEARLIAERDGLTQIPFADELIAAQGDMRIAEAI-------TGEQ 148

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +VF     S+    ++   R   +      LE   +     +  +Q+++  + NLF+K  
Sbjct: 149 RVFLARRQSLDGEKEVLDQRRDQLQEQIRGLEALIATKTKRIGLYQEEIDGLLNLFDKGL 208

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +  L + ER+  +   E  ++  +       I E   +       +  E+  +L   +
Sbjct: 209 GDKRTLREYERLSAELEGERAQHRSDIAAARIQIGETEIQIAQLKRKFTSEVVTELRDVE 268

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              AD   ++  L KT E+  I SP AG IV +   +     +    ++ +VP  +   I
Sbjct: 269 TQLADLRERMRALGKTLERTVIRSPAAGAIVGSSVHTIGGVIRPGDHILDVVPEDESLII 328

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A+V P  +  V  G  A +R   +        +  +  I       ++    Q YY   
Sbjct: 329 EARVQPIDVDRVSPGLEADLRMSAFNTRTTPVVQGRVLTISADRLLDESTR--QYYYLAR 386

Query: 391 LKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +++TD   +    + L+ G P E +      T    ++ P TD+  K F 
Sbjct: 387 IQVTDDGMAKLKGLTLQAGMPVEAMIKTGERTFIDYLVRPFTDSLAKAFR 436


>gi|256829790|ref|YP_003158518.1| HlyD family type I secretion membrane fusion protein
           [Desulfomicrobium baculatum DSM 4028]
 gi|256578966|gb|ACU90102.1| type I secretion membrane fusion protein, HlyD family
           [Desulfomicrobium baculatum DSM 4028]
          Length = 480

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 71/420 (16%), Positives = 162/420 (38%), Gaps = 20/420 (4%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   +  I  ++W+   P++  V   G+++    +  I++   GI+K+  V  G  + 
Sbjct: 67  LLIAVALVFIVAVSWAAYAPLDEVVRGIGKVIPSSEIKRIQNFEGGIVKEILVREGDLVG 126

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            G  L+  + I+       ++    +       ++ E +A + ++   D+L     S++ 
Sbjct: 127 TGQLLILLDQIQMESRYREQQSGFLDSTLAIARLEAELNAREDIDFPPDIL-----SQKP 181

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            L++   +   + +      +S + R  + +    +  + NR+D + ++  L        
Sbjct: 182 HLVENQRQLLRSRNDSRRAALSVLEREREQRSQEFKE-FKNRMDFQLRTHAL------LL 234

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           K++ M++++  K A S  DL + +R +   + E+ E+          +         E  
Sbjct: 235 KEVDMIRSMTAKGAASDMDLLRAQRELSDLSGEIAESRLAIPKAAAAVEGANHRIEEEKG 294

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                I  +L + +         L  LE   ++ ++ SP+ GT+      +        +
Sbjct: 295 KQRSAILDELSKIRTEMEGVKETLPALEDKMDRTSVRSPVDGTVKRVFVTTIGEAVGAGK 354

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +++IVP      I AKV P+ I  +  G  A V+   Y          ++E I      
Sbjct: 355 EMLEIVPQEDTLLIEAKVLPQDIAFLYPGQAAEVKITAYDFSIYGSMPGVVEHISADAIT 414

Query: 377 QDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
            +       YY + ++    +       ++ +  G  AEV       T+ Q ++ PI  +
Sbjct: 415 DEQENL--SYYLIKVRTDKASLKSRDGKDLPIIAGMVAEVDVLTGKKTVLQYLLKPILKS 472


>gi|87119192|ref|ZP_01075090.1| type I secretion adaptor protein (HlyD family protein) [Marinomonas
           sp. MED121]
 gi|86165583|gb|EAQ66850.1| type I secretion adaptor protein (HlyD family protein) [Marinomonas
           sp. MED121]
          Length = 442

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 77/430 (17%), Positives = 156/430 (36%), Gaps = 21/430 (4%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L    P   + +    ++ +I    W+    ++      G+++    V  +++   GI
Sbjct: 19  AALMLKTPRGGRIILWSILVFVIFGGLWANYTKLDEVTVGEGKVIPSSQVQIVQNLEGGI 78

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNK 123
           +K+  +E G  + +   L+T E+      +  ++     +      +  E S  D  +  
Sbjct: 79  LKEIHIETGDNVERDQLLMTIENTAAVSSLREQQAEGINLAVRAARLKAE-SGGDTPSFD 137

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D+     E  E +L            +++     S+  +  +   ++       ++L  
Sbjct: 138 ADLRALYPEVVEREL------------RLYQNRSESLSTNQFVFEQQVAQKQQEIIELSA 185

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K   LR      Q++L++ +  FE+ AVS+ +L Q ER V +   +++ +          
Sbjct: 186 KLDNLRTSYELAQEELSLTRPAFEQGAVSRVELLQLERQVNQMEGDMKASQLALPRAESS 245

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           + E   +     A +  E   +L + Q T          LE    +  + SP+ G +   
Sbjct: 246 LVEAKTKLLESSAKFRAEAQEELTKVQTTLDKIKEASVSLEDKVLRTQVRSPVKGIVKQL 305

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           Q  +     Q  Q L++IVP      I AK+ P+ I  +K    A V+   Y        
Sbjct: 306 QINTVGGVIQPGQSLVEIVPLEDSLLIEAKIRPEDIGFIKPELVAIVKLSAYDFAIYGGL 365

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTT 421
            A ++ I       +       +Y V ++     L   +N + +  G  A V       +
Sbjct: 366 NAQVDNISADTIIDEE---GNSFYLVRVRTNKSYLGTEENLLPIIPGMQATVDVITGKKS 422

Query: 422 LAQEIIHPIT 431
           L   +  PI 
Sbjct: 423 LLDYLFKPIL 432


>gi|94265132|ref|ZP_01288896.1| Type I secretion membrane fusion protein, HlyD [delta
           proteobacterium MLMS-1]
 gi|93454371|gb|EAT04672.1| Type I secretion membrane fusion protein, HlyD [delta
           proteobacterium MLMS-1]
          Length = 463

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 70/433 (16%), Positives = 170/433 (39%), Gaps = 14/433 (3%)

Query: 14  PASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P  +    LL I  ++G +  ++ +  I  +V + G +  + N   ++    GI+++  V
Sbjct: 36  PRRVVLAGLLVIFLVVGGVGVYAAVAEITAAVIAVGNVKVDSNRQTVQHLEGGIVREILV 95

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLEK 129
            NG Q+ +G  LL  E  +    +DL +     +   +  ++ E+  +  ++   ++ E+
Sbjct: 96  SNGDQVRKGDVLLRLETEQVVATVDLLRGQRDYLLARKARLEAERDQIPKIDWPEELQER 155

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A      ++++         +K+F+  + ++   +++   ++  + +    L N+ +   
Sbjct: 156 AHLPNVAEVME-------GENKIFHSRLRTMANEIELIEAQLEQLQVRTASLGNQIASTE 208

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            +++S ++++     L  +  + +  L +  R +        E I E+      I EL  
Sbjct: 209 RVIASLEEEVEAKAPLVAERFLERTHLLELSRTLESHQSRREELIGERAQTRERIAELRL 268

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                   Y +E +  L + Q +  +   +L        +  I++P+ G +V  Q  S  
Sbjct: 269 NIENIRNRYQEEANTTLGEVQNSLFELEDRLRPALDQARRLDIVAPVDGVVVDRQVHSPG 328

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                 + L+ I+P      + A++   QI  V  G  A +    +      + +  +  
Sbjct: 329 GVIGPGEKLLDILPTGSPLVVEAQIDVDQISRVHPGLNAELVLMAFKQRTTPRAQGTVTY 388

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSD---NNIELRNGFPAEVLFTAKNTTLAQEI 426
           +      ++       +Y V ++I   +      +   L  G P EV       T+   +
Sbjct: 389 VSADRLTEETAAGPMPHYLVEIEIDRDSVRRAVGDETLLTAGMPVEVYIQTGARTILAYL 448

Query: 427 IHPITDNWPKIFE 439
           + P+TD   +  +
Sbjct: 449 LEPLTDGLRRALK 461


>gi|95930057|ref|ZP_01312797.1| Type I secretion membrane fusion protein, HlyD [Desulfuromonas
           acetoxidans DSM 684]
 gi|95134026|gb|EAT15685.1| Type I secretion membrane fusion protein, HlyD [Desulfuromonas
           acetoxidans DSM 684]
          Length = 448

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 60/429 (13%), Positives = 142/429 (33%), Gaps = 15/429 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R        ++L+  + ++  + W+    ++      G+++    V  I+    GII++ 
Sbjct: 29  RTGHRFAYLLSLMIFLLMVIFVLWAHFTVLDEVTRGQGQVIPSQRVQIIQHLEGGIIEQI 88

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            VE    I +G  L+   +            +       I    +            E  
Sbjct: 89  LVEENQIIEKGDVLVRIRNTVAASQYRDAANTALEHEAAIARLTAEA----------ENG 138

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                +Q+     +  S   ++F    + +   + +  ++ +       +L ++   L+ 
Sbjct: 139 PLEFSQQIERDHPELVSDQRQIFEARQAQIDLEINVLESQYQQKQQEIRELSSRKKKLQQ 198

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            LS  ++ L +   L E+    + D    +R V     +L         +     E    
Sbjct: 199 GLSLAREQLDIATPLVEQELYPRVDYLSLKRDVANMQGDLNVVNLTIPRIRESAREAQRR 258

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            +   A Y  E+  ++ + +         ++  E    +  + SP+ GT+      +   
Sbjct: 259 IDQRRAQYHTEVLNEISKRRMELISLREAISAGEDRVTRTDVRSPVRGTVKQLIVNTVGG 318

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  +P++++VP      + A++ P  I  +  G  A ++   Y           +E+I
Sbjct: 319 VIRPGEPILEVVPLDDALLVEAQIRPADIAFLYPGQPAKIKLTAYDFSIYGGLDGYVEQI 378

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                    N   + +Y V L+  + A       + +  G  A V       ++   ++ 
Sbjct: 379 SADTI---VNEHQESFYRVKLRTKEKALTYKGTQLPIIPGMTASVDILTGKKSVLSYLLK 435

Query: 429 PITDNWPKI 437
           PI       
Sbjct: 436 PILKAKQTA 444


>gi|159042694|ref|YP_001531488.1| type I secretion membrane fusion protein [Dinoroseobacter shibae
           DFL 12]
 gi|157910454|gb|ABV91887.1| type I secretion membrane fusion protein [Dinoroseobacter shibae
           DFL 12]
          Length = 435

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 67/441 (15%), Positives = 162/441 (36%), Gaps = 14/441 (3%)

Query: 5   MWKNLKRNHPASLKRMT--LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           M     +  PA  + +   +   I + G  +WS++  I  ++ + G+I  + N   ++ P
Sbjct: 1   MTGPAAKKFPARRQLLIGGIALAILVGGFGSWSVMANIAGAIIAPGQIEVDQNRQVVQHP 60

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDF 119
             G++++  V+ G  +  G  L+  +         +++ +   +   R  +  E+   + 
Sbjct: 61  DGGVVQRIAVDEGDTVATGDLLIQLDPTLLQTDLSIVEGQLFELMARRALLVAERDGQEE 120

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    ++L  +  S E      +        ++F    +SV    +    R   I     
Sbjct: 121 VIFDEELLLVSATSPE------VADVMDGQRRLFEARNTSVETETEQLTRRRAQIGNQIE 174

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +E + + L   L   +++L   ++L ++     + +   +R   +    + E    +  
Sbjct: 175 GIEAQQTALTQQLDLIEQELADQQSLLDRGLAQASRVLSLQREQARLLGSVGELTASKAE 234

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                 E+  E      +  +E    L   Q   ++   +   L +   +  I +P+ G 
Sbjct: 235 FEGRQTEIDIEILKLSTSRREEAISRLRDTQAQESELKQQRQALRERLSRLDIRAPLGGI 294

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +     F+  +  + ++P++ IVP  +   I ++V P  +  V  G    +RF  +    
Sbjct: 295 VYDLSVFAERSVIRPAEPVLYIVPQDRPLIITSRVNPINVDEVYVGQEVNLRFSAFDQRL 354

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             + K  +  + P     +       +Y V     +        ++L  G P E      
Sbjct: 355 TPELKGKVVSVSPDAFVDE--ATGASFYRVETAPQEGEMEKLEGLDLIPGMPVEAFIRTA 412

Query: 419 NTTLAQEIIHPITDNWPKIFE 439
           + T  +  + P++D + + F 
Sbjct: 413 DRTPIEYFVKPLSDYFNRAFR 433


>gi|149200828|ref|ZP_01877803.1| type I secretion membrane fusion protein, HlyD family [Roseovarius
           sp. TM1035]
 gi|149145161|gb|EDM33187.1| type I secretion membrane fusion protein, HlyD family [Roseovarius
           sp. TM1035]
          Length = 435

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 66/433 (15%), Positives = 155/433 (35%), Gaps = 9/433 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
             +    L    +  ++ + G  TW+    I  ++ + G I  + N   ++ P  G++  
Sbjct: 8   AWSARKPLIIGLIGLVLLVGGFGTWAAFTQISGAIIAPGRIEVDQNRQVVQHPDGGVVSA 67

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV 126
            +++ G ++  G  L+  +  E    + + +  +  L   R  ++ E+   D L     +
Sbjct: 68  IEIKEGDKVSAGQVLVRLDPNELQSELSIIENQLAELMARRGRLEAERDGRDALKFDPLL 127

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           ++ + ++ +           +    +F     +V   +     R   I      +E +  
Sbjct: 128 IDLSAQNADA------ADLMTGQKTLFEARAQTVAAEIDQLDKRRGQISNQIEGIEAQQV 181

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L   L   + +LT  ++L ++       +   +R   + +  + +   ++      I E
Sbjct: 182 ALARQLELIELELTDQQSLLDRGLAQATRVLGLQREQARLSGTMGDLAAQKAEAEGRITE 241

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +         +  +E    L   Q    +   +   L +   +  I +P++G +   Q F
Sbjct: 242 IEISILKLGTDRREEAITTLRDLQFRELELREQRRALIEQMGRLDIPAPVSGVVYNLQVF 301

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +  +  + + P++ IVP  +   I A+V    +  +  G   T+RF         +    
Sbjct: 302 AQRSVIRPADPVLFIVPQDRPLVINARVDSIHVDKLFVGQEVTLRFSALDQRTTPELFGR 361

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           + +I     + +    +    E++L   + A       L  G P E      + T    +
Sbjct: 362 VTQISADAFEDEATRASYYRAEIVLSEGEQARLPEGTTLIPGMPVEAFIRTADRTPLAYL 421

Query: 427 IHPITDNWPKIFE 439
           + P TD   K F 
Sbjct: 422 VKPFTDYLAKAFR 434


>gi|260576968|ref|ZP_05844949.1| type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sp. SW2]
 gi|259020810|gb|EEW24125.1| type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sp. SW2]
          Length = 439

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 66/432 (15%), Positives = 149/432 (34%), Gaps = 14/432 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P  +  +TL  + G  G   WS+   I  ++ +SG+I  E N   ++ P  G++ +  
Sbjct: 16  TRPLVVGFLTLAVLFG--GFGLWSVSTNIAGAIVTSGQIEVEQNRQVVQHPDGGVVAEIA 73

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLE 128
           V  G  +  G  LL  +       + + +  +      R  +  E+   +      ++  
Sbjct: 74  VAEGDTVQAGDLLLRLDGATIHSELAIVEGQLYEMLARRARLTAERDDAEAPQFPPEL-- 131

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               +        + +      ++FN    S+ R       R + I      +  ++  L
Sbjct: 132 ----TAAATARADVAELMDGQLRLFNARRDSLARQGDQLAERQKQIESQITGITAQNDAL 187

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L+  +++L   + L +K       +   +R   +   ++ E         + I E  
Sbjct: 188 TTQLALIRQELADQQQLLDKGLAQSGRVLALQREEARMRGQVGELTASAAQAGQQITETR 247

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +     A+  +E S  L        + + +   L +   +  I +P++G ++  Q  + 
Sbjct: 248 IQILRLAADRREEASTQLRDIGSQELELVERRRALVERVARLEIRAPVSGIVLGLQVTTP 307

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               + + P++ ++P  +   I A+V    I  V  G    + F  ++     +    + 
Sbjct: 308 RAVLRPADPVLYLIPQDRPLIIAAQVPTIHIDQVHAGQEVRLMFSAFSARTTPQLNGHVA 367

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEII 427
            +         +     YY   + +          + L  G P E      + T    ++
Sbjct: 368 VVSADALVDPKSQT--SYYRAEIVLDPGEQQKLQGLTLLPGMPVEAFIRTDDRTPLAYLL 425

Query: 428 HPITDNWPKIFE 439
            P TD + + F 
Sbjct: 426 KPFTDYFNRAFR 437


>gi|323698693|ref|ZP_08110605.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio sp. ND132]
 gi|323458625|gb|EGB14490.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio desulfuricans ND132]
          Length = 442

 Score =  305 bits (782), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 61/418 (14%), Positives = 148/418 (35%), Gaps = 20/418 (4%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            M+   ++ I+  I W+ L  ++      G ++    + EI++   GI+ +  V+ G  +
Sbjct: 30  LMSTAILLMIVIFIVWAKLAMLDERTRGFGRVIPSQRIQEIQNLEGGIMNELFVQEGQTV 89

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            +G  L    + +        +      +     +  E       +   DV++KA     
Sbjct: 90  EKGDILCRLSNEQAASYYRDAQSKALEHQAAIARLQAEADGAAEPDFPPDVVKKA----- 144

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                   +      ++F    + +   + +   + +       ++  + + LR  L   
Sbjct: 145 -------PQLVEDQRRIFVAQRNKLNIDIGLLEDQYQQRQQEVSEMVARRNQLRQSLDVA 197

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +K   + K L EK+  S+ D  + E+ V +   +++        + R   E     +   
Sbjct: 198 EKQRNIAKPLVEKHIHSELDYLRLEQTVVQLRGDMQALTLGIPRVQRAAKEAKGRIDQAR 257

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A Y  +   ++   ++        L+       +  + SP+ G + +    +     +  
Sbjct: 258 AEYRADALEEINSRRQELNSIQENLSSGGDRVTRTDVRSPVRGVVKHIMVNTIGGVIRPG 317

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + +M++VP      + A+V P  I  +  G  A V+   Y          I+E I     
Sbjct: 318 ESIMEVVPLDDTLLVEAEVKPSDIAFLHPGQKAKVKITAYDFSIYGGLDGIVENISADTI 377

Query: 376 QQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           + +   + + +Y V ++  + A       + +  G  A V       ++   ++ P+ 
Sbjct: 378 EDE---KGESHYLVKVRTKENAITYRGQQLPIIPGMTASVDILTGRKSVLDYLLKPLL 432


>gi|238755254|ref|ZP_04616598.1| protease secretion protein prtE [Yersinia ruckeri ATCC 29473]
 gi|17426964|emb|CAD13437.1| putative metalloprotease secretion protein [Yersinia ruckeri]
 gi|238706488|gb|EEP98861.1| protease secretion protein prtE [Yersinia ruckeri ATCC 29473]
          Length = 443

 Score =  305 bits (782), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 71/435 (16%), Positives = 166/435 (38%), Gaps = 13/435 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + ++ +   +L     L + G    + W++L P++  V  +G ++   N   I+ P  GI
Sbjct: 14  QEVQCSENRALYWGWGLVLAGFGSFMLWALLAPLDKGVPVTGTVVVSGNRKAIQHPEGGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNK 123
           +++ +V +G ++  G  LLT   +      D        L      +  E+     L N 
Sbjct: 74  VERIRVHDGDRVEAGEVLLTLNAVRARSASDGLTAQYHQLLANEARLLAEQKGETQLLNT 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +     +     +L    +  ++  +     +  +  ++      M +          
Sbjct: 134 PHLELARQQPGMADILALQQQLLNSRQQALQLEMDGLRANIAGLQATMNAQRRVLSSKNL 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +   L   L+        +++L E+N V +N + +  +   +   E+ +   E     R 
Sbjct: 194 QKQALSQQLA-------GLQSLTEENYVPRNKMLETRQRYAELNGEIAQLSGEITRAERE 246

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I +     +     Y KE++  L + Q T    +S+L   +       + SP+AGT+V  
Sbjct: 247 IQQQNFRISQRQQEYQKEVNTQLAELQSTLTSVISQLESADFDLANVQMRSPVAGTVVEM 306

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           + F+        Q LM+IVP ++  ++ A+V    +  ++ G    ++F  +      K 
Sbjct: 307 KVFTEGGVIAAGQSLMEIVPDNQPLFVDARVPVAMVDKIQTGLLVELQFTAFNQSTTPKV 366

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
           +  ++ +       +     + YY + +++++      + ++++ G P +        TL
Sbjct: 367 EGTVKLLSADRLLDERTE--EPYYSMRVEVSETGRQKLDGLDVKPGMPVQGFVRTGERTL 424

Query: 423 AQEIIHPITDNWPKI 437
              +  P+ D     
Sbjct: 425 MNYLFKPLMDRLHMA 439


>gi|124267065|ref|YP_001021069.1| HlyD family secretion protein [Methylibium petroleiphilum PM1]
 gi|124259840|gb|ABM94834.1| HlyD family secretion protein [Methylibium petroleiphilum PM1]
          Length = 475

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 62/398 (15%), Positives = 141/398 (35%), Gaps = 13/398 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ L  I+      G+++    +  I+S   G++ +  V+ G  +  G  LL  ++   T
Sbjct: 81  WAALARIDEVTRGDGKVIPSRQLQVIQSLDGGVVSEILVKEGQVVEAGQLLLRIDETRAT 140

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +         L       ++  +            F+           +      +++
Sbjct: 141 SGVRENAAQSFALLARQARLRALAEG---------NPFQPPPPSKDPEERRIIEEERRLY 191

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               S +   + +   ++        +  ++ +     L   Q++L   + L    AVS+
Sbjct: 192 ESRQSELSTIVSISRQQLMQREQELNEARSRRASAERGLDLSQQELAKTRPLLASGAVSE 251

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            D+ + ER + K   ++ +   +   +   + E   +       +  E  ++L       
Sbjct: 252 VDILRLERDLSKYRGDVEQAGAQIARVSAAVGEAQRKIQETEIAFRNEARKELADVLGRM 311

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                    L    ++  + SP+ G +    + +     Q  + ++++VP      + A+
Sbjct: 312 NALTEGRVALSDKVDKAQVKSPVRGRVQRLLANTVGGVVQPGRDIVEVVPLDDALVLEAR 371

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V P+ I  +  G  ATV+F  Y         A +E I P     +   +   +Y V ++ 
Sbjct: 372 VFPRDIGFIHPGQQATVKFTAYDFSIYGGLDATVENISPDTVIDE---KGNAFYVVRVR- 427

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           T LA   + + +  G  AEV       T+   ++ P+ 
Sbjct: 428 TRLAQLGDKLPIIPGMTAEVDILTGKKTVMSYLLKPVL 465


>gi|90417983|ref|ZP_01225895.1| possible secretion membrane fusion protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337655|gb|EAS51306.1| possible secretion membrane fusion protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 445

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 69/428 (16%), Positives = 148/428 (34%), Gaps = 15/428 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           + +    LL+   I+G   W+    +  ++ + G++  +  V +I+    GI+    V N
Sbjct: 28  SRIITSGLLATALIVGCGGWAAQASLSGAIIAQGKVTVKKQVKQIQHRDGGIVGAILVAN 87

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAF 131
           G  +  G  L+  ++ +T   + +    +  L   +  +  E+   D +     + E+ F
Sbjct: 88  GDVVEAGEVLIRLDETQTKAELGVISSQLSELIGRQARLRAERDGADDV-----LFEQVF 142

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E+                 ++F+   ++         +++         LE++       
Sbjct: 143 ET-----AGATAAIAEGERRLFSDNRATRDAQADQLQSQIEQYGEQVRGLESQRESNALE 197

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                +DL  +  L ++  V        ER + K      E       +   I+E   + 
Sbjct: 198 RQMIAEDLARLAPLVKRKLVEGTRTRIMERDLAKIDGLKGEIEANIARVKGQISEARMKI 257

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                    +  R+L       A+   ++   +    +  + +PIAG +   +  +    
Sbjct: 258 IELDQQTRTDAQRELRDVDARVAELSERIVAAKDRLSRMDLRAPIAGFVNDLKVHTVDGV 317

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               + +M IVP  +   + AK++P  I  V  G    +RF  +      +    ++ + 
Sbjct: 318 ISPGETVMGIVPEGEELVVEAKLSPVDIDQVSVGQDVKLRFSAFNQRTTPEIDGRVDIVG 377

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
              +   +    Q YY   + ITD         L  G P EV       +    ++ P T
Sbjct: 378 A--AATLDPASGQTYYLSTIAITDEDRGLGKQILVPGMPVEVFLKTGERSALSYLVKPFT 435

Query: 432 DNWPKIFE 439
           D   + F 
Sbjct: 436 DQMMRSFR 443


>gi|150376532|ref|YP_001313128.1| HlyD family type I secretion membrane fusion protein [Sinorhizobium
           medicae WSM419]
 gi|150031079|gb|ABR63195.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium medicae WSM419]
          Length = 438

 Score =  305 bits (781), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 74/442 (16%), Positives = 169/442 (38%), Gaps = 17/442 (3%)

Query: 6   WKNLKRNHPASLKR----MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           W   K     SL R    +++L++  + G+  W+    +  ++ + G ++ +DNV +++ 
Sbjct: 4   WPQAKPTAHRSLSRHLIGVSVLALALVAGVGGWAATTELSSAIVAGGVVVVDDNVKKVQH 63

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALD 118
              GI+ +  V+ G ++  G  L+  +       + + + ++      R  +  E+    
Sbjct: 64  LTGGIVGELLVKEGDRVEAGQVLIRLDGTTVRANLAIIEGTLAQFYARRARLLAERIGAA 123

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               + D+ E    +  E+L+D          ++F    S++        +R   +    
Sbjct: 124 SFEIEEDLAEFISGTAAEKLID-------GEQRLFANRRSALLGMKGQLDSRKAQLADET 176

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             L  + + +   L    ++LT + +LF +  V    +   +R   +       +I  + 
Sbjct: 177 EGLTVQLNAIEDALKLIAEELTGVDSLFGQGLVPMQRVTTLKRQRAELEGGRGRHIAARA 236

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                 +E+  +      +   EIS++L   +   A+   + T       +  I +P++G
Sbjct: 237 QARGKSSEIDLQILQLDEDRRTEISKELTDVEAKIAEYEERRTAAADQLRRLDITAPLSG 296

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            I      + +      + LM +VP      + AKV    I  ++ G +  +RF  +   
Sbjct: 297 RIYQLAIHTVNGVINPGETLMLVVPEVDDLTVEAKVATHDIDQIRVGQSVEIRFSAFNQR 356

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
              + +A +  + P +   +       YY + ++    + +    + L  G PAEV    
Sbjct: 357 TTPEVEAEVVTVAPDLVTDERT--GASYYPLRIRPKTESLAKLKGLSLYPGMPAEVFIKI 414

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
            + T+   +  P+TD     F 
Sbjct: 415 ADRTVISYLTKPLTDQMRHAFR 436


>gi|83952300|ref|ZP_00961032.1| putative transport protein [Roseovarius nubinhibens ISM]
 gi|83837306|gb|EAP76603.1| putative transport protein [Roseovarius nubinhibens ISM]
          Length = 442

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 160/438 (36%), Gaps = 11/438 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +  + R+    +    +L +    G   W+   P+  +V S G  +   +   ++    G
Sbjct: 10  YAEVPRSVSKLVIFGLVLLLTTFGGFGLWAFTAPLAAAVISQGSFVATGSNKIVQHLEGG 69

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           IIK+  +E G  +  G PLL  ++     T   + L+++ ++ +   I  E +  + L  
Sbjct: 70  IIKEILIEEGDNVTAGQPLLRLDETSALATERELFLRQIRLEAMEARILAEYNQKETLTY 129

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +     +     +LD           VFN  +  +   +K+    + ++ +  +  +
Sbjct: 130 PAHLEALRSDFNIAAMLD-------GQRVVFNVALQQMKNDVKLLQQNIEALTVRAVGYQ 182

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +    RA  +   +D    + L ++  + +++ N   R + +   ++   I E   +  
Sbjct: 183 QQLISSRAQHAILLEDSNAKQTLLDQGLIRRSEFNALRRAIAEIEGQIGRLIAEVDEITE 242

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                  +     +        +L+  Q        +    E    +  +++P+AGT+V 
Sbjct: 243 VKRRYEAQIAQAVSERRGAALDELQVVQSELESVREQARTAENVLRRAEVVAPVAGTVVR 302

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +     +  + + +I+P  +   I  ++   +I  VKKG  ATVR           
Sbjct: 303 LHYHTPGGVIESGKAIAEILPTGEPLIIEVQIPRVEIDVVKKGQPATVRLTALNQRITPI 362

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
               +  +        +  + +E Y   + +               G PAE++   +  T
Sbjct: 363 LMGEVFYVSADAILDRSQEKPREIYVARVSVPPAELDRVRGFTPTPGMPAEIMIQTEERT 422

Query: 422 LAQEIIHPITDNWPKIFE 439
             Q ++ P+TD+  + F 
Sbjct: 423 FVQYLMKPVTDSMTRAFR 440


>gi|254512850|ref|ZP_05124916.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
 gi|221532849|gb|EEE35844.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
          Length = 435

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 72/429 (16%), Positives = 158/429 (36%), Gaps = 12/429 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A      L   I ++GL  WS+   +  ++ S G I  + N   I+ P  G++ +  V +
Sbjct: 14  APAFVGILALAILVLGLGVWSVRTELAGAIISQGVIEVQSNRQVIEHPDGGVVGEIFVRD 73

Query: 75  GSQILQGTPLLTFEDI---ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           G  + +G  +L  +D        ++D +   +   +  ++ E+          ++ +   
Sbjct: 74  GDAVARGDLMLRLDDTFLASEKTIVDSQLFELLARKTRLEAERDGASAETLAQNLQD--L 131

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +SRE    D L        ++FN  + ++ + +     +   I       + + + L   
Sbjct: 132 KSREPIGDDLLA----GQQRLFNARLETLTQQIDQLGKQKVQIGNEIEGTQAQLAALNIQ 187

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   + +LT  + L E+     + ++  +R     T ++         +   I+    + 
Sbjct: 188 VDLIRTELTDQQGLLERGLTQASRVSALQREEANLTGQIGRLESTIARLTGQISTTEIQI 247

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               A   +E    L   Q    +   +   L +   +  I +P+AGT+  +Q F+  + 
Sbjct: 248 VELQATRREEAITQLRDVQSRVVELAERRLSLTERLSRLDIRAPVAGTVYDSQVFAIQSV 307

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  +P+M +VP      + A+V    +  + +G    +RFP +      +    +  + 
Sbjct: 308 IQPGEPMMYVVPQDTPLLVAARVDALHVDQLHRGQGVALRFPAFNQRDTPELDGHVINVS 367

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                 +       +Y   +   D      N  EL  G P E +      T    ++ P+
Sbjct: 368 ADTFTDE--SSGFTFYRAEVVPDDGQLERLNGQELLPGMPVEAMIKTDERTPLSYLVKPL 425

Query: 431 TDNWPKIFE 439
            D + + F 
Sbjct: 426 ADYFYRAFR 434


>gi|241203029|ref|YP_002974125.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240856919|gb|ACS54586.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 481

 Score =  305 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 74/422 (17%), Positives = 172/422 (40%), Gaps = 12/422 (2%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL ++ I+GL  WS+L P++ +  +SG +  E +   I+    GI+++  V+NG  ++ G
Sbjct: 66  LLILVFIVGLGIWSVLAPLKSAAIASGVVEPESSRKTIQHLEGGIVRRILVKNGDAVMGG 125

Query: 82  TPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             ++  +D ++    D  +  +   +  R  +  E++  D +    D+     +      
Sbjct: 126 QIVIELDDTKSRSERDSIQGQLWDAEGSRARLLAEQTGGDHIAYPEDLRAAMDK------ 179

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              +        K+F      +   +++   ++  +    + L  + + L    +   ++
Sbjct: 180 YPSVSTILIGQQKIFEARRRVMQAEIQIANEKIAQVRQEIVGLGAQKAALADRATISSQE 239

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  +  L  K    ++ L   +R       +  +   +     + I+    +     ++ 
Sbjct: 240 LDQVTILSAKGLERRSRLLNLQREKADLDGQQGQVEAQISRAYQVISGSQADLAKLESDR 299

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L E+++ +   +        +L  ++    +  I +P  GTI+  +  +S       +PL
Sbjct: 300 LSEVAQGMRDTESRIMQLRERLRAIDDQLSRTDIRAPEDGTIMNLRIHTSGGVIGAGEPL 359

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + ++P S    + A V P+ I  V  G  A V    Y   R    K  +E +     +  
Sbjct: 360 VDLLPRSDRLVVSAHVRPEDINLVHAGLEAQVHLLPYNQRRVPLLKGRVEYVSAD--RLT 417

Query: 379 NNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           +    Q Y+   +++TD   +   ++EL  G PA++L     +++A   + P+ D++ + 
Sbjct: 418 DPQSGQPYFAATIRVTDERLAKMKDVELVAGMPAQILIETGKSSVALYAVRPLLDSFNRA 477

Query: 438 FE 439
           F 
Sbjct: 478 FR 479


>gi|56476412|ref|YP_158001.1| HlyD family secretion protein [Aromatoleum aromaticum EbN1]
 gi|56312455|emb|CAI07100.1| HlyD family secretion protein [Aromatoleum aromaticum EbN1]
          Length = 473

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 62/426 (14%), Positives = 152/426 (35%), Gaps = 15/426 (3%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W  L++  P   + +  +    I+ L+ W+    ++       +++    V  I++   G
Sbjct: 53  WARLQQ-EPLRARVLLRVVAGVIVLLLLWAGFAQVDEVTRGEAKVVPSSQVQIIQTVDGG 111

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I+++  V  G  +  G  LL  +       +   +     L+      ++  +       
Sbjct: 112 IVEQMPVREGQIVNAGELLLRIDPTRFVSSLAENRSQFFALQAKAARLEALTNGTAF--- 168

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                  +  + +L  + +  +    ++   ++ +   L +   ++        ++  + 
Sbjct: 169 -------TLPDDVLREVPEIAAHERLLYASSVAGMEAQLSIARQQLTQRQQELNEVRARH 221

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                      ++L + + L +  AVS+ D+ + ER V +   +  ++  +   +   I 
Sbjct: 222 EQASRGFQLAMQELGVTRPLVKSGAVSEVDILRLERDVSRLRGDRDQSTAQISRIQSAIA 281

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   +      +   E+  +L                L    +   + SP+ GT+     
Sbjct: 282 EATRKIQEVELSVRNEMRSELSDTMARLGSLSEGSRALADRVKHAEVRSPVRGTVKRLLV 341

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     Q  + +++IVP      + A+V PK I  +  G  A V+F  Y        +A
Sbjct: 342 NTVGGVVQPGREVVEIVPLDDALILEAQVKPKDIAFLHPGQAALVKFTAYDFAIYGGLEA 401

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           ++E+I       D   +   +Y V ++    +  D  + +  G  AE+       T+   
Sbjct: 402 MVEQIGADTVTDD---KGNAFYTVRVRTQKSSLGDE-LPIIPGMVAEIDILTGKKTILSY 457

Query: 426 IIHPIT 431
           ++ P+ 
Sbjct: 458 LLKPVL 463


>gi|153011293|ref|YP_001372507.1| HlyD family type I secretion membrane fusion protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151563181|gb|ABS16678.1| type I secretion membrane fusion protein, HlyD family [Ochrobactrum
           anthropi ATCC 49188]
          Length = 479

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 69/422 (16%), Positives = 158/422 (37%), Gaps = 12/422 (2%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL +I + G   W++  P++ +  + G +  E +   I+    GI+++  V NG  +  G
Sbjct: 64  LLVLIFVAGFGIWAVFAPLKSAAVAVGVVEAESSRKTIQHLEGGIVQQIYVHNGDLVSNG 123

Query: 82  TPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             L+  +D +    +     +    +  R  +  E++    L    ++ + A  +     
Sbjct: 124 QILIKLDDTKPRTELVGIQGQLWDAQASRARLVAEQANEMQLLFPPELEQLAPHNPA--- 180

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              +        ++F          + +   +M  +      L  +   L + +   ++ 
Sbjct: 181 ---VNAIVVGQRRIFEARRDVYRSEIAITHEKMGQVKEEITGLAAQKMALSSRIEITRQQ 237

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L M+  L +K    +  +    R       +L E I +     + INE         ++ 
Sbjct: 238 LDMINPLVKKGLERKTSVLNLAREKADLDGQLGETIAQMSRAYQVINEAQANLVKLESDR 297

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             EI+++L + +        +   +     +  I +P  G ++  +  ++       +PL
Sbjct: 298 QNEIAKELRETENQLFLLSERYRAINDQLIRTDIKAPENGIVMDLRIHTTGGVIGAGEPL 357

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + +VP      + A V P+ I  V+ G  A V    Y   R    +  +  +     +  
Sbjct: 358 LDLVPQDGNMIVSAHVRPEDINLVRPGLNAQVHLLPYDQRRVPLLEGQVTYVSAD--RLI 415

Query: 379 NNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           +    Q YY   +++TD       ++E+  G P + L     +++A   + P+ D++ + 
Sbjct: 416 DKQTGQPYYAATIRVTDDELMQAGDVEMIPGMPVQALIETGESSVALYAVRPLLDSFHRA 475

Query: 438 FE 439
           F 
Sbjct: 476 FR 477


>gi|297537906|ref|YP_003673675.1| HlyD family type I secretion membrane fusion protein [Methylotenera
           sp. 301]
 gi|297257253|gb|ADI29098.1| type I secretion membrane fusion protein, HlyD family
           [Methylotenera sp. 301]
          Length = 470

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 61/431 (14%), Positives = 141/431 (32%), Gaps = 14/431 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            +    P   K +       +  LI W+    ++      G ++    V  I+S   GI+
Sbjct: 51  AILEQTPLRAKVLLYSIAAALAVLIIWAFFAKVDEVTRGEGRVIPSKQVQVIQSLDGGIV 110

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V  G  +  GTPL+  ++      +   +     L        +  +         
Sbjct: 111 SEILVAEGQAVKVGTPLIRIDETRAVSSLRENQTQYLALLAKQSRLTALAEGTAFNPP-- 168

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                   +Q+     + +     ++      +  ++ +   +M       ++++ +  +
Sbjct: 169 --------KQVQMNAPQTYDQEYALYISSKEELQSTISIARDQMDQREKELIEVQYRKEV 220

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                 S  K+L   + L    AVS+ D+ + ER   K+  ++ +   +   +   I E 
Sbjct: 221 AEKNYESATKELAANRPLLASGAVSEIDILKLERESTKAKGDIDQARAQISRIESSIGEA 280

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +       +  ++  +L                L     Q T+ SP+ G +      +
Sbjct: 281 RRKVTEVDQTFKSKVRTELNDITARLNSITETSVGLTDKVNQATLKSPVNGKVSRLFFNT 340

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  + ++++VP  +   +  K+  K I  ++    A V+   Y         A +
Sbjct: 341 VGGVIQPGKEVLEVVPTDEALILETKIQIKDIAFIRLEQPAVVKLTAYDYSIYGALDAKV 400

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
           E I       +   +   YY V ++    +     + +  G  A+V       T+   ++
Sbjct: 401 ESISANSIVDE---KGNAYYVVRVRTLKSSLG-KGLPIIPGMVAQVDIMTGKKTVLSYLL 456

Query: 428 HPITDNWPKIF 438
            P+       F
Sbjct: 457 KPVLKAKSYAF 467


>gi|86358827|ref|YP_470719.1| HlyD family protein secretion protein [Rhizobium etli CFN 42]
 gi|86282929|gb|ABC91992.1| protein secretion protein, HlyD family [Rhizobium etli CFN 42]
          Length = 435

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 80/434 (18%), Positives = 170/434 (39%), Gaps = 13/434 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR+    +  +  LSI  + G+  W+    +  +V   G ++ + +V +I+    GI+ +
Sbjct: 9   KRSLNRHVAVVGALSIALVCGIGGWAATTELSSAVIGEGVVVVDGDVKKIQHLTGGIVSE 68

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV 126
             V     +  G  L+  +   T   + + + ++  L   R  +  E+   +    + ++
Sbjct: 69  LLVSENQHVSAGQVLIRLDGTATRAQLSIVESTLAQLYARRARLKAERIGAESFEVEENL 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +    +  +QLLD          K+F+   S++        +R   +      L  + +
Sbjct: 129 SDLTSSTAAQQLLD-------GERKLFDSRRSALIGMKSQLASRKDQLGEQIKGLVVQIN 181

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L   +++L  +  L++K  V+   LN  +R          + I  +        E
Sbjct: 182 ATGDSLGLIEQELEAVDVLYKKGLVTLQRLNTLKRARADLQGNSGQEIAAKAEAEGKAIE 241

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  ++     +   EI++DL   +   A+   +         +  I +P++G +      
Sbjct: 242 IDRQSIQLDEDRRSEIAKDLTDVEAQIAENEERRGTALDQLRRLDITAPLSGRVHELSVH 301

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           + +   +  Q L  +VP +    ++AKV  + I  V  G +  VRF  +        +A+
Sbjct: 302 TVNGVIEAGQTLGLVVPENDDLTVQAKVATRDIDQVHVGQSVDVRFSAFDQRTTPDVQAV 361

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           I  I P I + +       YY + +K    + +   +I+L  G PAEV     + T+   
Sbjct: 362 ITSIAPDIVKDERT--GISYYPLRVKPEAQSIAKLKSIKLYPGMPAEVFIKIGDRTVISY 419

Query: 426 IIHPITDNWPKIFE 439
           +  P+TD    +F 
Sbjct: 420 LTKPLTDQMQHVFR 433


>gi|316935448|ref|YP_004110430.1| HlyD family type I secretion membrane fusion protein
           [Rhodopseudomonas palustris DX-1]
 gi|315603162|gb|ADU45697.1| type I secretion membrane fusion protein, HlyD family
           [Rhodopseudomonas palustris DX-1]
          Length = 440

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 71/443 (16%), Positives = 164/443 (37%), Gaps = 18/443 (4%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H   +++++R     +  + +++         W+I  P+  +V +  +++ + NV  ++ 
Sbjct: 11  HGDPFRDIRRAAGLGIATLVIVASTA----GVWAITAPLASAVIAPAQVVVDSNVRRVQH 66

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALD 118
           P  G++ +  V +G ++  G  L+  ++      + L +  +  L   R  + +E++  D
Sbjct: 67  PTGGVVAEIYVNDGDEVRAGDMLVRLDETMPRANLALIENQLNQLMVRRARLQSEQNGSD 126

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +    ++  +   +   +++D         + +F     ++         R   I    
Sbjct: 127 TVALPVEIAARRNVAAIAEMID-------GETTLFVRRRDAISGQQSQLRERKAQIADEI 179

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             LE +    R  +   Q +L  ++ L+EKN V    L   ER   + T E  + I E  
Sbjct: 180 RGLEAQIVSKREQIRWIQTELEGVRQLYEKNLVPYARLTALEREASRLTGEEGQLIAEIA 239

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                I E   +      +  +E++ +L   +   AD   +        ++  + +P  G
Sbjct: 240 RAKGRITETELQIIQLVQDQRREVATELRDVETKIADLGERRIAALDQLDRVVLRAPQDG 299

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +      +        + LM IVP      + AKV P+ I  ++ G +A +RF  +   
Sbjct: 300 LVHQKSVHTVGGVITAGEQLMLIVPKDS-LVVEAKVDPQMIDRLRVGQSARLRFSAFDAA 358

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTA 417
              +    + ++   +++         YY   + +     +  +   L  G P E     
Sbjct: 359 VTPELDGTLTRVAADLTKDQQ--SGVAYYVARISLVPSELAKLDGKALVPGMPVEAFIQN 416

Query: 418 KNTTLAQEIIHPITDNWPKIFER 440
              T    +  P+ D   +   +
Sbjct: 417 GVRTAFAYLRKPLEDQLARAMRQ 439


>gi|148255279|ref|YP_001239864.1| putative RTX secretion protein D [Bradyrhizobium sp. BTAi1]
 gi|146407452|gb|ABQ35958.1| putative RTX secretion protein D [Bradyrhizobium sp. BTAi1]
          Length = 447

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 60/437 (13%), Positives = 155/437 (35%), Gaps = 13/437 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + +K +         +   +   G   WS   P++ +  + G +    +   ++    GI
Sbjct: 18  QPVKADFGRYALLGYISIALVFGGFGVWSAYAPLDRAAIAPGTVSVSGDHKVVQHREGGI 77

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNK 123
           +++   +   ++ +G  L   +  E     DL +  +         +  E+     +   
Sbjct: 78  VREILAKETREVRRGDLLFRLQPTEAQANTDLLRKQMDAALAEEARLLAERGNARMITFP 137

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +L +         +       +   ++F    + +   + +  +++          + 
Sbjct: 138 DSLLNRQNVPEAALAI-------ADQQRLFIERRNGLISQINILNSQIVQQQQELAGRDR 190

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + + L A L+S    +  ++    +    +N   + ER   +   +L +   +   + + 
Sbjct: 191 QRAALGAQLASFDTQMNNVRPAVAQGYYPRNKFLELERDRARVEGDLGQAQADVARLTQT 250

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             +   + +     Y  E+ + L+  +   +D   KL I E    +  I +   G ++  
Sbjct: 251 AAQTRLQIDQALQKYQTEVGQQLDGTRAKLSDLREKLVIAEDVLRRVDIRAERDGIVMNM 310

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +     +    L +IVP  +   + A V+P+ I+ V  G  A VRFP+++       
Sbjct: 311 KVHTVGAVVKPGDTLAEIVPIGEGVDVMAHVSPRDIESVAVGQKAEVRFPNFSSRTTPTI 370

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTL 422
              ++ +       +     Q YY   + I           ++  G  A+V+ +    T+
Sbjct: 371 FGKVQSVSADAISDE--ATKQSYYSARVVIDYSTLPPEIASKIMPGMQADVIISTGERTV 428

Query: 423 AQEIIHPITDNWPKIFE 439
            + ++ P+ +   K F 
Sbjct: 429 LEYLVGPLLNTLAKTFR 445


>gi|149190741|ref|ZP_01869007.1| putative RTX transport protein [Vibrio shilonii AK1]
 gi|148835397|gb|EDL52368.1| putative RTX transport protein [Vibrio shilonii AK1]
          Length = 442

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 76/434 (17%), Positives = 161/434 (37%), Gaps = 9/434 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
            H  W N  R      +++  +    +  +I W+    ++  V   G ++   +V  I+S
Sbjct: 4   SHIEWNN--RQLAYRSRKLIWIVAALVTVIIGWASWATLDEVVVGEGSVVPSQSVQTIQS 61

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALD 118
              G+I+   V  G  +++G PL   +D            +  S+   R  ++ E +++ 
Sbjct: 62  LEGGLIENILVRQGDSVIKGQPLAILDDTRFRASFQESGKQFDSLAAQRVRLEAELASVK 121

Query: 119 FLNNKYDVLEKAFESREEQLL-DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             N + D  ++   +  + +  D            +   +  V   L+    R+      
Sbjct: 122 VDNQQSDWQKQVTVTPFDIVTNDTSSAALFNAKANYYERLEQVISELEESKLRIEQQAQA 181

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             D ++    L++ L+  +K+  ++K++ E  AV++ +L +  R V +   +L       
Sbjct: 182 VSDTQSSIRTLQSSLAIVKKERDLLKSVVESGAVAEVELLKLNRDVIRLEGDLSSAKVSA 241

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +       E   +      NY  +    L +   T A        +     +  I SP+ 
Sbjct: 242 QKQRAAYAEAIADHRGIALNYRTKAQGQLNEISATIAQLKESRQAIADQLRRTQIESPVD 301

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
            T+      +     +  +P+M++VP +    + AK+ PK I  +  G  ATV+F  Y  
Sbjct: 302 ATVKEVFVRTIGGVVRPGEPIMELVPKNSGLIVEAKIAPKDIAFISVGLEATVKFSAYDF 361

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +     K  +  +     Q ++      YY   +++   A  + +  +  G  A V    
Sbjct: 362 VIYGGQKGKVTYVSADALQTED---GAAYYRAHIELDQQALEEKSFTVIPGMQAAVDILT 418

Query: 418 KNTTLAQEIIHPIT 431
              T+    + PI 
Sbjct: 419 GEKTVLSYWLKPIL 432


>gi|254797259|ref|YP_003082101.1| secretion protein, HlyD family [Neorickettsia risticii str.
           Illinois]
 gi|254590501|gb|ACT69863.1| secretion protein, HlyD family [Neorickettsia risticii str.
           Illinois]
          Length = 499

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 76/441 (17%), Positives = 169/441 (38%), Gaps = 23/441 (5%)

Query: 17  LKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            + +  + +IG  G    W++  PI+ +  + GEI+   +   ++    GII++  V  G
Sbjct: 62  ARLVGTVVLIGFFGIFGMWAVFAPIDGASLAMGEIVISSDKKSVQHLEGGIIEEIFVHEG 121

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L+T +++     + + +   +N    + TE+  L  +  K ++     E  E
Sbjct: 122 DHVTEGQVLMTLKNVGNKAQLSILE---ENQISLLATEQRLLAHIGRKPNMELPNMEKLE 178

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
               +           +F     S    +++   ++  I    L L+ +       +   
Sbjct: 179 YVTEEKKNDTIKNQLLLFESNKESFANKVRIIDKKIGQIQNEVLALKAQLESAEKSVQLL 238

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +++L   ++L++++ + +  +   ER       ++ E         + + E   E     
Sbjct: 239 EEELEAKRSLYDEHVIDKTKIVSLERERISWNGKIAEYKALIARGEQRVTEAELEKIQAE 298

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            ++  E++  L++      + M KLT       +  I +P AG +   +S S       +
Sbjct: 299 NSFNSELAAQLKEVSHAIHENMQKLTTAYDLMLRTIIRAPQAGIVTGLRSLSIGGVIPPA 358

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPHYADIRE 360
             LM+IVP ++  +I AKV P  I+ +                 G    V+   +   + 
Sbjct: 359 ISLMEIVPENEDMFIEAKVAPNNIEAIASARLVKKNLSEVDGYIGVKTRVKITAFNSKKV 418

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAK 418
              K ++  I        +      YY   ++I  +++A  +   +L  G PA V  T +
Sbjct: 419 GILKGVMTYISANTI--LDPRTGMHYYLAHIRIPKSEIAMINARTKLYPGMPAVVFITTE 476

Query: 419 NTTLAQEIIHPITDNWPKIFE 439
           + +    ++ PI   +   F 
Sbjct: 477 SRSFLSYLLAPIIATFDTAFR 497


>gi|84501458|ref|ZP_00999663.1| putative transport protein [Oceanicola batsensis HTCC2597]
 gi|84390749|gb|EAQ03237.1| putative transport protein [Oceanicola batsensis HTCC2597]
          Length = 446

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 71/438 (16%), Positives = 157/438 (35%), Gaps = 11/438 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +  + R+         LL  I   G   W+ L P+  +V S G  +       ++    G
Sbjct: 14  YAAVPRSIARQATIGLLLMAITFGGFGAWAFLAPLAAAVISQGSFVAIGQNKIVQHLEGG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNN 122
           IIK   V+ G Q+  G  LL  ++ +         L+   ++ +   +       + L  
Sbjct: 74  IIKDILVDEGDQVQAGQLLLRLDETKALANERELVLRLSRLEAIEARLLALYDGKERLTF 133

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              ++E++  +   Q+L       +     F+     +   + +      ++ +     E
Sbjct: 134 PPHLIEQSERAEIRQIL-------AGQQTAFDSATEGLQNEIALLERNRAALAVRSAGYE 186

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            + +     +   +++      L  K  + + ++   +R + ++  ++     E   + +
Sbjct: 187 AQLASHNEQVELLEEEFAARDILLGKGLMRRAEMTALKRTLVEAAGQIGRLEAEIGEIEQ 246

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
             ++   +       + +    DL+  Q        +L      RE+  +++P++GT+V 
Sbjct: 247 LSHKYEMQIAQTVRQHQQSALDDLQPIQGELDSIREQLAAARNVRERTDVIAPVSGTVVR 306

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               ++    +  + + +I+P  +   I  +V    I  V+KG  AT+R           
Sbjct: 307 LHYHTAGGVIESGRAIAEILPSEQPLIIEVQVPRVDIDSVRKGQHATIRLTALNRRTTPI 366

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
               +  +         N  TQE Y   + +         N     G PAE++      T
Sbjct: 367 LYGKVIYVSADSVTDTQNGNTQEVYIARISMPVTELRRVANFTPTPGMPAEIMIQTAERT 426

Query: 422 LAQEIIHPITDNWPKIFE 439
            AQ I+ PI D+  + F 
Sbjct: 427 FAQYIVKPIRDSLGRAFR 444


>gi|327191612|gb|EGE58624.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CNPAF512]
          Length = 481

 Score =  303 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 78/427 (18%), Positives = 171/427 (40%), Gaps = 12/427 (2%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +    LL ++ I+GL  WS+L P++ +  +SG I  E +   I+    GI+++  V+NG 
Sbjct: 61  VWMGNLLMLVFIVGLGIWSVLAPLKSAAVASGVIEPESSRKTIQHLEGGIVRRILVKNGD 120

Query: 77  QILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            ++ G  ++  +D ++    D    +    +  R  +  E++  D +    D+       
Sbjct: 121 AVISGQIVIELDDTKSRSERDSILGQLWDAEGNRARLLAEQAGADQVTYPEDLRAAMDRY 180

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                        +   K+F      +   +++   R+  +    + L  + + L    +
Sbjct: 181 PAA------SAILTGQQKIFEARRQVMQAEIQITNERIAQVRQEIVGLGAQKTALADRAA 234

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++L  +  L  K    +N L   +R       +  E   +     + I+    +   
Sbjct: 235 ISSQELDQVIALSAKGLERKNRLLNLQREKADLDGQQGEVAAQISRAYQVISGAQADLAK 294

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             ++ L EI++ +   +        +L  ++    +  I +P  GTI+  +  +S     
Sbjct: 295 LESDRLSEIAQGMRDTEGRIMQLRERLRAIDDQLSRTDIRAPEDGTIMNLRVHTSGGVIG 354

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             +PL+ ++P S    +   V P+ I  V+ G  A V    Y   R    K  +E +   
Sbjct: 355 AGEPLVDLLPRSDRLIVSVHVRPEDINLVRAGLEAQVHLLPYNQRRVPLLKGRVEYVSAD 414

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
             +  +    Q Y+   +++TD   +  +++EL  G PA+ L     +++A   + P+ D
Sbjct: 415 --RLIDTQTGQSYFAATIRVTDERLAKMSDVELVAGMPAQTLIETGESSVAFYAVRPLFD 472

Query: 433 NWPKIFE 439
           ++ + F 
Sbjct: 473 SFNRAFR 479


>gi|29421535|gb|AAO73509.1| RsaE [Caulobacter vibrioides]
          Length = 435

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 65/439 (14%), Positives = 160/439 (36%), Gaps = 14/439 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     +    N+    +    +  +  +GL+ W+   P++ +V ++G I  E N   I+
Sbjct: 1   MKPPKIQRPTDNYKTVARIGYGIIALTFVGLLGWAAFAPLDSAVIANGVISAEGN-KTIQ 59

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSAL 117
               G+++K  V  G ++  G  L      +    + + K     L+     +  E+   
Sbjct: 60  HLEGGMLRKILVREGEKVRAGQVLFELHPTQANSAVGITKNQFLALKGHEGRLLAERDQR 119

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             ++     + +  +         + +  +     F+    ++   + +   +       
Sbjct: 120 PSISLPGRPVSQRADP-------MVTRAIADEQAQFSERRQTISGQVDLMNAQRAQYQSE 172

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              +E ++  L+  L   + +L  ++ + +K  V +  L   ER     +  +     ++
Sbjct: 173 IEGIERQTQGLKDQLGFIKDELGDLRKISDKGLVPRPRLLALEREEASLSGSIGRLTADR 232

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              ++   E   +       + +E+S+ + + +   A+   +  +    + +  ++SP+ 
Sbjct: 233 AKAVQGAGETQLKIRQIKQQFFEEVSQSISETRVKLAEVTEREVVASDAQRRINVVSPVN 292

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT    + F+     +  +PL+ I P  +   I+A   P  + +V  G    VR P +  
Sbjct: 293 GTAQNLRFFTEGAVVRPGEPLVDIAPDDEAFVIQAHFAPTDVDNVHAGMVTEVRLPAFHS 352

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFT 416
            +       IE I        +      Y+  I+++           ++  G PA+V+  
Sbjct: 353 RKIPILNGKIESISRDRLSDPDGKTV--YFLGIVRVDIKQLPKEFRTKITAGMPAQVVVP 410

Query: 417 AKNTTLAQEIIHPITDNWP 435
               T+ Q +  P+ D   
Sbjct: 411 TGERTVLQYLFSPLRDTLR 429


>gi|146340351|ref|YP_001205399.1| putative secretion HlyD family protein RTX secretion protein D
           [Bradyrhizobium sp. ORS278]
 gi|146193157|emb|CAL77169.1| putative Secretion HlyD family protein, putative Gram-negative
           bacterial RTX secretion protein D [Bradyrhizobium sp.
           ORS278]
          Length = 449

 Score =  303 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 56/420 (13%), Positives = 148/420 (35%), Gaps = 13/420 (3%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
             +   G   W+   P++ +  + G +    +   ++    GI+++   +  + + +G  
Sbjct: 37  IALVFGGFGVWAGFAPLDRAAIAPGTVSVSGDHKVVQHREGGIVREILAKETNAVHRGDL 96

Query: 84  LLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           L   +  E     DL +  +         +  E+     +     +L +         + 
Sbjct: 97  LFRLQPTEAQANTDLLRKQMDAALAEEARLLAERGNARMITFPDTLLNRQNVPEAAMAI- 155

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                 +   ++F    + +   + +  +++          + + + L A L+S    + 
Sbjct: 156 ------ADQQRLFVERRNGLISQINILNSQIVQQQQELAGRDRQRTALAAQLASFDTQMN 209

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            ++         +N   + ER   +   +L +   +   + +   +   + +     Y  
Sbjct: 210 NVRPAVAAGYYPRNKFLELERDRARVEGDLGQAQADVARLTQTAAQTRLQIDQSLQKYQT 269

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E+ + L+  +   +D   K+ I E    +  I +   G ++  +  +     +    L +
Sbjct: 270 EVGQQLDATRAKLSDLREKIVIAEDVLRRVDIYAERDGIVMNMKVHTIGEVVKPGDTLAE 329

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           IVP  +   + A V+P+ I+ V  G  A VRF +++          +  +       +  
Sbjct: 330 IVPVGEGVDVMAHVSPRDIESVAIGQKAEVRFANFSSRTTPAIFGKVASVSADAVSDE-- 387

Query: 381 LQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
              Q YY+  + I           ++  G  A+V+ +    T+ + ++ P+ +   K F 
Sbjct: 388 ASKQSYYKARVVIDYSTIPPEIAEKILPGMQADVIISTGERTVLEYLVGPLLNTLAKTFR 447


>gi|86747927|ref|YP_484423.1| Type I secretion membrane fusion protein, HlyD [Rhodopseudomonas
           palustris HaA2]
 gi|86570955|gb|ABD05512.1| Type I secretion membrane fusion protein, HlyD [Rhodopseudomonas
           palustris HaA2]
          Length = 440

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 77/444 (17%), Positives = 155/444 (34%), Gaps = 14/444 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           +         R+   ++        I I     W++  PI  +V +  +++ + NV  I+
Sbjct: 6   VTEDRRSAPFRDVRNAVIIGVAALAIVISTAGVWAVTAPIASAVIAPAQVVVDSNVRRIQ 65

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSAL 117
            P  G++    V +G  +  G  LL  ++      + L +  +      R  +  E++  
Sbjct: 66  HPTGGVVAGISVNDGDYVHAGDELLRLDETLPRANLALIENQLNQFWTRRARLQAEQNGR 125

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D +    ++  +  E    Q+++          +      S +         R   I   
Sbjct: 126 DAMPVPVELTGRTDEPAIAQIIEGETALLLRRREAITGQQSQLGE-------RKSQIGEE 178

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              L  +    R  +   Q++L  ++ LF+KN +    L   ER   + T E  + I + 
Sbjct: 179 IRGLAAQIDSKREQIRLIQRELEGVRQLFDKNLIPYARLTALEREAARLTGEEGQLIADT 238

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 I E   +      +  +E++ DL + +   AD   +    +    +  + +P  
Sbjct: 239 ARAKGRITETELQIIQLTQDQRREVATDLREVEIKIADLAERRIAAQDQLTRVVLRAPQD 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I      +        + LM IVP      I A+V P+ I  +K G  A +RF  +  
Sbjct: 299 GLIHQKAVHTVGGVISPGEQLMLIVPKDS-LVIEARVEPQMIDRLKPGQPAKLRFTAFDT 357

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFT 416
               +    + +I   +++         YY V + + +   +      L  G P E    
Sbjct: 358 AVTPELDGTLTRIAADLTKDQQ--SGAAYYVVRINLAERELARLEGKVLVPGMPVEAYIQ 415

Query: 417 AKNTTLAQEIIHPITDNWPKIFER 440
               T    +  P+ D   + F +
Sbjct: 416 NGVRTALAYLRKPLEDQLARAFRQ 439


>gi|255264002|ref|ZP_05343344.1| type I secretion membrane fusion protein, HlyD family
           [Thalassiobium sp. R2A62]
 gi|255106337|gb|EET49011.1| type I secretion membrane fusion protein, HlyD family
           [Thalassiobium sp. R2A62]
          Length = 431

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 71/438 (16%), Positives = 152/438 (34%), Gaps = 12/438 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M  +   +    L    L  I+ + G  TW++   I  ++ +SG I  + N   I+ P  
Sbjct: 1   MSTSQTWSARKPLIIGFLALIVLVGGFGTWAVRTQITGAIIASGRIEVDQNRQIIQHPTG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLN 121
           GI+ +  V  G  +     L+  +D      + + +  +  L   R  ++ E+  +  + 
Sbjct: 61  GIVAEILVREGEPVEAEEILMRLDDNAYRSELAIIEGQLFELIARRGRLEAERDGMKEIV 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               + E   +              +   ++F    +S    +     R   I      +
Sbjct: 121 FDMLLDEAGAQGE---------SLKAGQLRLFVARRASEDNQIDQLTKRAGQIRNQIEGI 171

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
             + + L   L+  +++L   + L ++       +    R          +   +     
Sbjct: 172 VAQQAALTEQLALIEEELVSQQALLDRGLAQAARVLALRREKASLLGSQGDFTAQIAQAE 231

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I E   +         ++    L   Q    +   +   L    ++  I +P++G + 
Sbjct: 232 GRITETDIQIITLDNERREDAITRLRDLQFNELELSERRAALLVELDRLDIRAPVSGIVY 291

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
               F+  +  + + PLM +VP  +   I A+V    I  V  G    VRF  +   R  
Sbjct: 292 DLTIFAPRSVVRPADPLMYLVPQDRPLVIAAEVETIHIDQVFVGQEVNVRFSAFDQRRTP 351

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           +    + ++     + +    +    E+IL   ++    +++ L  G PAE      + T
Sbjct: 352 ELIGRVTQVSADAFEDERRGASFYRAEIILVDGEIEKLPDDLTLIPGMPAESFLRTDDRT 411

Query: 422 LAQEIIHPITDNWPKIFE 439
               +I P+ D + K F 
Sbjct: 412 PLDYLIKPLADYFAKAFR 429


>gi|119504417|ref|ZP_01626497.1| Type I secretion membrane fusion protein, HlyD [marine gamma
           proteobacterium HTCC2080]
 gi|119459925|gb|EAW41020.1| Type I secretion membrane fusion protein, HlyD [marine gamma
           proteobacterium HTCC2080]
          Length = 625

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 66/433 (15%), Positives = 152/433 (35%), Gaps = 14/433 (3%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
             + +    P   +R+     + ++ +I W+    ++I     G+++    V  + S   
Sbjct: 203 AEEAILDQEPLKTRRLLYGIALSVVMIIVWATFAEVDIVTRGQGKVIPSRQVQILGSQDG 262

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +  V  G  + +G  LL  +   +   +         L       ++  D      
Sbjct: 263 GVITEILVREGDLVQKGELLLKLDQTRSQSSLGENMAERSGLIVRAARLRAMADG----- 317

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               + FE  +E L D     +    ++++  +  +     +   +++       +L  +
Sbjct: 318 ----QPFEPTQEMLTDTADIVYQ-EKQLYDSRLEELEVQKGIASQQLKQRREELRELGVR 372

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              L   L    ++L+    + E  AVS  ++ + +R V K+  EL +   +   +   I
Sbjct: 373 RGQLGRELELATEELSTTTPMIESGAVSPVEVLRLQREVNKAEGELNQTRAQLSRVSASI 432

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E   +       +   +   L                L     Q  +LSP+ GTI    
Sbjct: 433 SEAEGKLAGVDLEFSNGVREQLADTVNRINALKEAGAGLSDRVRQTNLLSPVTGTIKQLL 492

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        + +++++P      +  +V P+ I  +  G  A V+   Y  +     +
Sbjct: 493 YNTVGGIVLPGRDIVELIPADDSLLVEVRVRPQDIAFMAPGQVANVKVTAYDFVVYGGLE 552

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             +E+I       +       +Y+V ++ T +AF  +   +  G   EV       T+  
Sbjct: 553 GKVEQIGADTVLDEE---GNAFYDVAVRTTTVAFGKDQ-PIIPGMTVEVDILTGKKTIMA 608

Query: 425 EIIHPITDNWPKI 437
            ++ P+     + 
Sbjct: 609 YLMKPVLRAQQRS 621


>gi|332559361|ref|ZP_08413683.1| Type I secretion membrane fusion protein, HlyD family precursor
           [Rhodobacter sphaeroides WS8N]
 gi|332277073|gb|EGJ22388.1| Type I secretion membrane fusion protein, HlyD family precursor
           [Rhodobacter sphaeroides WS8N]
          Length = 433

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 69/437 (15%), Positives = 154/437 (35%), Gaps = 12/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M + +  +    L        + + G  TWS+   I  ++   G+I  E N   ++ P  
Sbjct: 1   MSRPVPWSSRKPLILGFATLALLVGGFGTWSVASSISGAIVVQGQIEVEQNRQVVQHPDG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           G+++  +V  GS +  G  LL F+         +++ +   +   R  ++ E+     L 
Sbjct: 61  GVVESIEVSEGSVVQAGDILLRFDGTTLRTELAIVEGQLFEMLARRARLEAERDDAKGLG 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               +LE       E+    + +      ++F     S  + ++    R   I      +
Sbjct: 121 VFPALLEA------EKNRPVVAEQIEGQKRLFTARSESFAQQIEQLGKRKAQIVSQIEGV 174

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + + S L   L   +++L+  ++L  K     + +   +R   +   EL E    + N  
Sbjct: 175 DAQISALGTQLRLIEEELSDQQDLLSKGLAQASRVLSLQREEARLEGELGELTASRANNE 234

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             + EL  E     +   +E    L        +   + + L +   +  + +P++G ++
Sbjct: 235 GRMTELDIEMLRLGSTRREEAITQLRDFGYRELELAERRSALIEQINRLDLRAPVSGIVL 294

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             Q  +     + + P++ I+P  +   I   V P  I  V  G    + F  ++     
Sbjct: 295 GLQVTTPRAVVRAADPVLYIIPQDRPLVIAGHVPPIHIDEVAVGQPVRLVFSAFSSRTTP 354

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
           +    +  +       +       YY   + +     +   +  L  G P E        
Sbjct: 355 ELTGHVTVLSADALTDNRTQT--SYYRAEIMLDPGETAKLEDRNLVPGMPVEAFIRTGER 412

Query: 421 TLAQEIIHPITDNWPKI 437
           +    ++ P TD + + 
Sbjct: 413 SPLAYLLKPFTDYFNRA 429


>gi|77464472|ref|YP_353976.1| RTX secretion protein D [Rhodobacter sphaeroides 2.4.1]
 gi|126463312|ref|YP_001044426.1| HlyD family type I secretion membrane fusion protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221640364|ref|YP_002526626.1| Type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sphaeroides KD131]
 gi|77388890|gb|ABA80075.1| RTX secretion protein D, HlyD family [Rhodobacter sphaeroides
           2.4.1]
 gi|126104976|gb|ABN77654.1| type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sphaeroides ATCC 17029]
 gi|221161145|gb|ACM02125.1| Type I secretion membrane fusion protein, HlyD family precursor
           [Rhodobacter sphaeroides KD131]
          Length = 433

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 69/437 (15%), Positives = 154/437 (35%), Gaps = 12/437 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M + +  +    L        + + G  TWS+   I  ++   G+I  E N   ++ P  
Sbjct: 1   MSRPVPWSSRKPLILGFATLALLVGGFGTWSVASSISGAIVVQGQIEVEQNRQVVQHPDG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           G+++  +V  GS +  G  LL F+         +++ +   +   R  ++ E+     L 
Sbjct: 61  GVVESIEVSEGSVVQAGDILLRFDGTTLRTELAIVEGQLFEMLARRARLEAERDDAKGLG 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               +LE       E+    + +      ++F     S  + ++    R   I      +
Sbjct: 121 VFPALLEA------EKNRPVVAEQIEGQKRLFAARSESFAQQIEQLGKRKAQIVSQIEGV 174

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + + S L   L   +++L+  ++L  K     + +   +R   +   EL E    + N  
Sbjct: 175 DAQISALGTQLRLIEEELSDQQDLLSKGLAQASRVLSLQREEARLEGELGELTASRANNE 234

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             + EL  E     +   +E    L        +   + + L +   +  + +P++G ++
Sbjct: 235 GRMTELDIEMLRLGSTRREEAITQLRDFGYRELELAERRSALIEQINRLDLRAPVSGIVL 294

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             Q  +     + + P++ I+P  +   I   V P  I  V  G    + F  ++     
Sbjct: 295 GLQVTTPRAVVRAADPVLYIIPQDRPLVIAGHVPPIHIDEVAVGQPVRLVFSAFSSRTTP 354

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
           +    +  +       +       YY   + +     +   +  L  G P E        
Sbjct: 355 ELTGHVTVLSADALTDNRTQT--SYYRAEIMLDPGETAKLEDRNLVPGMPVEAFIRTGER 412

Query: 421 TLAQEIIHPITDNWPKI 437
           +    ++ P TD + + 
Sbjct: 413 SPLAYLLKPFTDYFNRA 429


>gi|189184014|ref|YP_001937799.1| alkaline protease secretion protein AprE [Orientia tsutsugamushi
           str. Ikeda]
 gi|189180785|dbj|BAG40565.1| alkaline protease secretion protein AprE [Orientia tsutsugamushi
           str. Ikeda]
          Length = 512

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 72/442 (16%), Positives = 154/442 (34%), Gaps = 35/442 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +     +     + II I+    WS L P++ +  + G +++      I+    GI+K+ 
Sbjct: 89  QTARGPILFGVWVMIIFIVVGGLWSALAPLDSAAVAVGTVISSTENKIIQHQEGGIVKEI 148

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVL 127
            V+ G  +  G P++  +D +    +++K    + L   +  +  E    + +     ++
Sbjct: 149 FVKQGDYVKTGDPIIALDDTKIRASVEIKLGQYRTLLANQARLTAELEQQEEIIFSEFLV 208

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                    +++           K  N  I    + +                LE K   
Sbjct: 209 NNNHIPEVAKIMSIQQHLFQARKKGLNARIMQFEKRID--------------SLEAKVVA 254

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +  L   +K +   ++L  +    + +L++         +E    +         IN  
Sbjct: 255 SKKQLEYVRKLIKNAESLIAQGFGQKTELDKL-------LVEESSLVGNIIITELEINST 307

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +     +  +     +L++ +    +       L     +  + SP+ G I      +
Sbjct: 308 QQDIERTKSEAIDRTLSELKEVEHAVIEAQESYNSLIDILSRTLVKSPVDGIIKVLDVNT 367

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                   Q + +I P +    I+AK+  K I  VK G  A +RF  +       F   +
Sbjct: 368 QGGVIGSGQRIAEITPSNDSLIIKAKIPQKNIDSVKVGLKAKIRFGAFKYRTTPVFTGRV 427

Query: 368 EKIDPIISQQ-------DNNLQTQEYYEVILKITDLAFSD----NNIELRNGFPAEVLFT 416
             + P   Q        +N +    +Y   ++I    F+      N++L  G  A++   
Sbjct: 428 VLVSPDTVQDQQSAMQFNNAMIGDTFYIAKIEIDMDEFNKVAKVKNLKLFPGMQADIQII 487

Query: 417 AKNTTLAQEIIHPITDNWPKIF 438
               TL + ++ PITDN  + F
Sbjct: 488 TGTRTLLRYLLDPITDNMFRAF 509


>gi|296537379|ref|ZP_06899234.1| possible alkaline proteinase secretion protein [Roseomonas
           cervicalis ATCC 49957]
 gi|296262293|gb|EFH09063.1| possible alkaline proteinase secretion protein [Roseomonas
           cervicalis ATCC 49957]
          Length = 424

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 67/428 (15%), Positives = 163/428 (38%), Gaps = 14/428 (3%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           +L      +++ + G   WS   P+  +  + G+I +E N   I+    GI+++    +G
Sbjct: 5   TLAFGLAATLLFVGGFGAWSAFAPLAEAAIAPGQIRSEGNRRTIQHLEGGIVREILARDG 64

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            ++  G  L+  +D+++   ++  +            +D E      +      L  + +
Sbjct: 65  DRVRAGQVLMRLDDVQSVTGLETLRAQHWAFLAQEARLDAEARGAGEIAFPAP-LRDSPD 123

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            R  +++       ++   +F    +S+   L++   R+          + + +  R  L
Sbjct: 124 PRALEIM-------TSQRTLFAARQTSLQSQLQVLEARIAQHEATASSAQGQIASQRRQL 176

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              +++   +  L  +       L   +R V      + +   + +       E  ++  
Sbjct: 177 ELIRREEASVVELVRQGLERMPRLLALQRNVASLEGNMVDLNGQVERAQASAEEARNQMR 236

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                 L EI+ +  +N+    +   KL   +    ++ I++P  GTI+ ++ F+     
Sbjct: 237 QVRDQRLAEITGEARENRTRLHEAAEKLRAAQDVATRREIVAPEDGTILGSRFFNLGAVI 296

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +  +P+M++VP         +++P  I  V  G  A VR P +           +  +  
Sbjct: 297 RPGEPVMELVPAEDRLVADVQLSPNDIDVVYPGLQAEVRLPAFKQRLVPFLHGHVTYVAS 356

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            ++  +       +Y V + I     +   N+ LR G P E      + +  + ++ P+ 
Sbjct: 357 DVTTDERTRA--SHYRVQIVIDQEQLARLENVVLRAGMPVEAQIQTGSRSFFRYMMQPVL 414

Query: 432 DNWPKIFE 439
           D++ + F 
Sbjct: 415 DSFHRAFR 422


>gi|190890292|ref|YP_001976834.1| protein secretion protein, HlyD family [Rhizobium etli CIAT 652]
 gi|190695571|gb|ACE89656.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CIAT 652]
          Length = 481

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 77/427 (18%), Positives = 171/427 (40%), Gaps = 12/427 (2%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +    LL ++ I+GL  WS+L P++ +  ++G I  E +   I+    GI+++  V+NG 
Sbjct: 61  VWMGNLLILVFIVGLGIWSVLAPLKSAAVATGVIEPESSRKTIQHLEGGIVRRILVKNGD 120

Query: 77  QILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            ++ G  ++  +D ++    D    +    +  R  +  E++  D +    D+       
Sbjct: 121 AVISGQIVIELDDTKSRSERDSILGQLWDAEGNRARLLAEQAGADQVTYPEDLRAAMDRY 180

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                        +   K+F      +   +++   R+  +    + L  + + L    +
Sbjct: 181 PSA------SAILTGQQKIFEARRQVMQAEIRITNERIAQVRQEIVGLGAQKTALADRAA 234

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++L  +  L  K    +N L   +R       +  E   +     + I+    +   
Sbjct: 235 ISSQELDQVTALSAKGLERKNRLLNLQREKADLDGQQGEVAAQISRAYQVISGAQADLAK 294

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             ++ L EI++ +   +        +L  ++    +  I +P  GTI+  +  +S     
Sbjct: 295 LESDRLSEIAQGMRDTEGRIMQLRERLRAIDDQLSRTDIRAPEDGTIMNLRVHTSGGVIG 354

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             +PL+ ++P S    +   V P+ I  V+ G  A V    Y   R    K  +E +   
Sbjct: 355 AGEPLVDLLPRSDRLIVSVHVRPEDINLVRAGLEAQVHLLPYNQRRVPLLKGRVEYVSAD 414

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
             +  +    Q Y+   +++TD   +  +++EL  G PA+ L     +++A   + P+ D
Sbjct: 415 --RLIDTQTGQPYFAATIRVTDERLAKMSDVELVAGMPAQTLIETGESSVAFYAVRPLLD 472

Query: 433 NWPKIFE 439
           ++ + F 
Sbjct: 473 SFNRAFR 479


>gi|16125261|ref|NP_419825.1| RsaA secretion system, membrane protein RsaE [Caulobacter
           crescentus CB15]
 gi|221233998|ref|YP_002516434.1| type I secretion adaptor protein RsaE [Caulobacter crescentus
           NA1000]
 gi|6064108|gb|AAC38667.2| membrane forming unit [Caulobacter crescentus CB15]
 gi|13422299|gb|AAK22993.1| RsaA secretion system, membrane protein RsaE [Caulobacter
           crescentus CB15]
 gi|220963170|gb|ACL94526.1| type I secretion adaptor protein RsaE [Caulobacter crescentus
           NA1000]
          Length = 436

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 63/439 (14%), Positives = 164/439 (37%), Gaps = 13/439 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     +    N  A  +    +  +  +GL+ W+   P++ +V ++G +  E N   ++
Sbjct: 1   MKPPKIQRPTDNFQAVARIGYGIIALTFVGLLGWAAFAPLDSAVIANGVVSAEGNRKTVQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSAL 117
               G++ K  V  G ++  G  L   +  +      + +     +K +   +  E+   
Sbjct: 61  HLEGGMLAKILVREGEKVKAGQVLFELDPTQANAAAGITRNQYVALKAMEARLLAERDQR 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             ++   D+  +  +         + +  +     F     ++   + +   +       
Sbjct: 121 PSISFPADLTSQRADP-------MVARAIADEQAQFTERRQTIQGQVDLMNAQRLQYQSE 173

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              ++ ++  L+  L   + +L  ++ L++K  V +  L   ER     +  +     ++
Sbjct: 174 IEGIDRQTQGLKDQLGFIEDELIDLRKLYDKGLVPRPRLLALEREQASLSGSIGRLTADR 233

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              ++  ++   +       + +++S+ + + +   A+   K  +    +++  I+SP+ 
Sbjct: 234 SKAVQGASDTQLKVRQIKQEFFEQVSQSITETRVRLAEVTEKEVVASDAQKRIKIVSPVN 293

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT    + F+     + ++PL+ I P  +   I+A   P  + +V  G    VR P +  
Sbjct: 294 GTAQNLRFFTEGAVVRAAEPLVDIAPEDEAFVIQAHFQPTDVDNVHMGMVTEVRLPAFHS 353

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFT 416
                    I+ +         N    +Y+  I+++       +    +  G PA+V+  
Sbjct: 354 REIPILNGTIQSLSQDRISDPQNKL--DYFLGIVRVDVKQLPPHLRGRVTAGMPAQVIVP 411

Query: 417 AKNTTLAQEIIHPITDNWP 435
               T+ Q +  P+ D   
Sbjct: 412 TGERTVLQYLFSPLRDTLR 430


>gi|332305989|ref|YP_004433840.1| type I secretion membrane fusion protein, HlyD family [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173318|gb|AEE22572.1| type I secretion membrane fusion protein, HlyD family [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 476

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 71/426 (16%), Positives = 156/426 (36%), Gaps = 15/426 (3%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W+ L++N P   + +    +  +I L+ W+    +       G+++  + +  ++S   G
Sbjct: 56  WEQLQQN-PLKARMLLYFIVFALIALLLWAANATLNEVTRGDGKVVPSNQLQVVQSYDGG 114

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I+K+     G  +  G  LL  +       +   +    +L   +   K+  +  N +  
Sbjct: 115 IVKEILTREGQTVNAGDILLKLDPTRFMSTLRENRSQYLSLSAKLARLKALTE--NTEPV 172

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             EK  +   E +     +Y +   ++  +        + M   + R       + ++  
Sbjct: 173 FFEKLVKQAPEIVRSEQNQYAANVEELAQH--------ISMYQQQTRQREHELQEAQSTK 224

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                     Q++L + + L +  A+S  D+ + ER + +   E++ N    +     I 
Sbjct: 225 EQYVRTKDLIQRELAVTRPLLKSGAISDIDIIRLERQLVEIEGEIKRNESVIRRNESAIK 284

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   +   +          +L              + L     Q  + SP+ GTI     
Sbjct: 285 EAKSKIREKELTTTNRWRNELSDVSTELNSLKETESGLADVVYQADLKSPVKGTIKRLFI 344

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +          +++I+P      + AK+ P+ I  ++ G TA V+F  Y  +     +A
Sbjct: 345 NTIGGVVPPGSDVIEIIPLDDQLIVEAKIKPQDIAFLRPGQTAMVKFTAYDFVIYGGLEA 404

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            +  I       +N+   + YY V L+    +F  N +++  G   +V       T+   
Sbjct: 405 EVTHISADTITDEND---ETYYVVRLQTDSNSF-KNGMQIIPGMTTQVDIITGKKTVLDY 460

Query: 426 IIHPIT 431
           I+ P+ 
Sbjct: 461 ILKPLL 466


>gi|227819305|ref|YP_002823276.1| alkaline protease secretion protein AprE [Sinorhizobium fredii
           NGR234]
 gi|227338304|gb|ACP22523.1| alkaline protease secretion protein AprE [Sinorhizobium fredii
           NGR234]
          Length = 438

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 66/437 (15%), Positives = 168/437 (38%), Gaps = 13/437 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
              +R+    +  +++L++  + G+  W+    +  ++ + G ++ +DNV +++    GI
Sbjct: 9   SGARRSLSRHMIGVSVLALALVAGVGGWAATTELSSAIVAGGVVVVDDNVKKVQHLTGGI 68

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNK 123
           + + +V+ G ++  G  L+  +       + + + ++  L   R  +  E+   +  +  
Sbjct: 69  VGELKVKEGERVEAGQVLIRLDGTTVRANLAIVESTLAQLYARRARLQAERIGAESFDID 128

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            DV      +   +L+D          ++F    +++        +R   +      L  
Sbjct: 129 KDVASLISGAAATKLVD-------GEQRLFASRRTALLGMKGQLQSRKAQLADEIEGLTV 181

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +   +   L+   ++LT + +L+ +  V    +   +R   +   +   +I  +      
Sbjct: 182 QLKAIEDALTLIAEELTGVDSLYGQGLVPMQRVTTLKRQRAELEGDRGRHIASRAQARGK 241

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            +E+  +      +   EIS++L   +   A+   + T       +  I +P+ G +   
Sbjct: 242 SSEIDLQVLQLDEDRRTEISKELTDVEAKVAEYEERRTATTDQLRRLDITAPLPGRVYQL 301

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              + +      + LM +VP +    + A+V    I  +  G    +RF  +      + 
Sbjct: 302 AVHTVNGVVNPGETLMLVVPEADDLTVEARVATHDIDQIHVGQPVEIRFSAFNQRTTPEV 361

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTL 422
           +A +  + P +   +       YY + ++    + +    + L  G PAEV     + T+
Sbjct: 362 EAEVVTVAPDLVSDERT--GASYYPLRIRPKPESLAKLKGLSLYPGMPAEVFIKIADRTV 419

Query: 423 AQEIIHPITDNWPKIFE 439
              +  P+TD     F 
Sbjct: 420 ISYLAKPLTDQMRHAFR 436


>gi|90020939|ref|YP_526766.1| HlyD family secretion protein [Saccharophagus degradans 2-40]
 gi|89950539|gb|ABD80554.1| Type I secretion membrane fusion protein, HlyD [Saccharophagus
           degradans 2-40]
          Length = 461

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 147/399 (36%), Gaps = 16/399 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    ++      G+++    V  +++   GI+ +  V  G ++ +G  LL  +D +   
Sbjct: 67  ASWAELDEFARGEGKVIPSQYVQVVQNLEGGILAELYVREGERVARGEKLLRIDDTQFAS 126

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +    V++          ++  +    K ++ +       + L+D    Y+ +  +   
Sbjct: 127 SLREAGVTLAQWELKSMRLRAESNGEAFKPEIKK----GWPQFLVDQELAYYQSRQQELA 182

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                  + L  +   +        +LE +   L+   +   ++L M + L  + A+S+ 
Sbjct: 183 GNKEIYDQQLTQRKQEL-------AELEARKEQLQRSYNLLNQELQMTRPLVSQGAISEV 235

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L + ER V     EL         +   ++E  ++       + +E   +L +     +
Sbjct: 236 ELLRLERQVNDLLGELEAAQLAIPRVKSSLDEAKEKLASVDIVFRREAQEELNKVTLELS 295

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                   L    ++  ++SP+AGT+      +     Q    +++IVP  ++  + A+V
Sbjct: 296 RLQETSEALVDRVKRTMVISPVAGTVKQLLVKTIGGVIQPGMDIVEIVPSEEIMLVEARV 355

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
            P  I ++  G  A V+F  Y           +  I P   Q ++      +Y V ++ +
Sbjct: 356 RPADIGYLHPGQKAKVKFSAYDFSVMGGLDGEVVHISPDTIQDED---GDSFYLVRIETS 412

Query: 395 D--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
              +      + +  G    V       T+   ++ PI 
Sbjct: 413 RTFIGPDGRELPIIPGMTVSVDILTGKKTILDYLLKPIL 451


>gi|88608033|ref|YP_506803.1| HlyD family type I secretion membrane fusion protein [Neorickettsia
           sennetsu str. Miyayama]
 gi|88600202|gb|ABD45670.1| type I secretion membrane fusion protein, HlyD family
           [Neorickettsia sennetsu str. Miyayama]
          Length = 494

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 76/441 (17%), Positives = 169/441 (38%), Gaps = 23/441 (5%)

Query: 17  LKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            +    + +IG  G    W++  PI+ +  + GEI+   +   ++    GII++  V  G
Sbjct: 57  ARITGTVVLIGFFGIFGMWAVFAPIDGASLAMGEIVISSDKKSVQHLEGGIIEEIFVHEG 116

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L+T +++     + + +   +N    + TE+  L  +  K ++     E  E
Sbjct: 117 DHVTEGQVLMTLKNVGNKAQLSILE---ENQISLLATEQRLLAHIGRKANMELPNIEKLE 173

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
               +           +F     S    +++   ++  I    L L+ +       +   
Sbjct: 174 YVTEEKKSDTIKNQVLLFESNKESFANKVRIIDKKIGQIQNEVLALKAQLESAEKNIQLL 233

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +++L   ++L++++ + +  +   ER       ++ E         +H+ E   E     
Sbjct: 234 EEELEAKRSLYDEHVIDKTKIVSLERERISWNGKIAEYKALIARGEQHVTEAELEKIQVE 293

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            ++  E++  L++      + M KLT       +  I +P +G +   +S S       +
Sbjct: 294 NSFNSELAAQLKEVSHAIHENMQKLTAAYDLMLRTIIRAPQSGIVTGLRSLSIGGVIPPA 353

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPHYADIRE 360
             LM+IVP ++  +I AKV P  I+ +                 G    V+   +   + 
Sbjct: 354 ISLMEIVPENEDMFIEAKVAPNNIEAIVSARLVKKNLSEVEGYIGVRTRVKITAFNSKKV 413

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAK 418
              K ++  I        +      YY   ++I  +++A  +   +L  G PA V  T +
Sbjct: 414 GILKGVMTYISANTI--LDPRTGMHYYLAHIRIPKSEIAMINARTKLYPGMPAIVFITTE 471

Query: 419 NTTLAQEIIHPITDNWPKIFE 439
           + +    ++ PI   +   F 
Sbjct: 472 SRSFLSYLLAPIIGTFDTAFR 492


>gi|303327937|ref|ZP_07358376.1| LapA secretion membrane fusion protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861763|gb|EFL84698.1| LapA secretion membrane fusion protein [Desulfovibrio sp. 3_1_syn3]
          Length = 673

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 59/433 (13%), Positives = 141/433 (32%), Gaps = 11/433 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L R     ++ +++   +    L+ W+    ++    + G+++       I++   GI
Sbjct: 234 AALARRPRFGVRALSITVAVMFACLLVWAAFAKVDEVTHAEGQVVGSQRTQTIQNLEGGI 293

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLNNKY 124
           ++   V  G  + +G  L   ++                    I   ++ L         
Sbjct: 294 LRAVLVREGQIVNKGDVLAQLDNELAESSYRDAVNKAMENSLAIARLEAELKDQRPVFPE 353

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLEN 183
           D+ + A      ++ +          +       S    L  ++  ++S Y  R  D+E 
Sbjct: 354 DLQDWAARLTGHKVDENTLARARQIIRDQENAWQSRQNQLNAEIEVLKSQYDQRRHDVEE 413

Query: 184 KSS---LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           + +    L   L+   +       L ++N  S+ +    ++ V +   ++          
Sbjct: 414 QIARKTQLDRSLALSIEQRDTAYALVQRNNFSRMEYLGLQQKVVELQGQIDMLAASIPKA 473

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                E         A     I+ ++ + +         L        +  + +P+ GT+
Sbjct: 474 QAAAEESKQRIASRRAEQNAAITEEINKRRLELNSLRETLAAGSDRVTRTELRTPVRGTV 533

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 +     +  +P+M IVP      + AKV+PK +  ++ G    V+   Y     
Sbjct: 534 KQIYINTVGGVVKPGEPIMDIVPLDDTLLVEAKVSPKDVAFLRPGQEVMVKVSAYDFSIY 593

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAK 418
              +  +E I     +     +   +Y V ++    A + +N  + +  G          
Sbjct: 594 GGLEGKLESISADTIED---KKGNYHYLVKVRTQKTAITYHNEVLPIIPGMIVTADILIG 650

Query: 419 NTTLAQEIIHPIT 431
             T+   ++ PI 
Sbjct: 651 KKTVLDYLLKPIL 663


>gi|254512426|ref|ZP_05124493.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
 gi|221536137|gb|EEE39125.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
          Length = 446

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 73/438 (16%), Positives = 160/438 (36%), Gaps = 11/438 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +  + R+    +    ++ I+   G   WS   P+  +V + G  +       ++    G
Sbjct: 14  YAEVPRSITRFIVIGLVMLIVCFGGFGVWSFRAPLAAAVIAQGSFVATGRNKIVQHLEGG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNN 122
           II+   V  G  +  G  ++T +             +K+ ++ +   +  E S  + L  
Sbjct: 74  IIENILVTEGEAVQAGQIMMTLDQTSAEANERELFIRKIRLQAMTERLLAEHSEQETLVF 133

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +++ + +     +LD          K     I+ + R+++    R        + +E
Sbjct: 134 SPALIDASDDVEVMTILDNQKLSFDVSRKTLLNDIALLQRNMEALRIRATGFDAQLISME 193

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +S +L       Q++      LFEK  V + DLN   R+  ++  +L     E   + +
Sbjct: 194 RRSDIL-------QEEYDTKFALFEKGLVRKGDLNTIRRVQAEAEGQLARLRAETAEVNQ 246

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + +  ++     + Y +    +L   +        K        ++  + +P+ GT+V 
Sbjct: 247 MLLKYEEQILRTRSAYREAALDELGVIEADLESVREKARQARSVLDRAVVRAPVTGTVVR 306

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +     +  + + +I+P +    I A++   +I  V  G  ATVR           
Sbjct: 307 LHHHTPGGVIETGEQIAEILPANAPLIIEAQIPRTEIDSVVTGQMATVRLVALNQRTTPV 366

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTT 421
            +  +  +      +D+    QE Y   + +T    +         G PAE++   +  T
Sbjct: 367 LEGEVFYVSADSLVEDSAGMPQEVYLARISLTSDEMNRVRGFVPTPGMPAEIMIQTEERT 426

Query: 422 LAQEIIHPITDNWPKIFE 439
            A  I  P+ D+  + F 
Sbjct: 427 FAAYIAKPVVDSMSRAFR 444


>gi|116694642|ref|YP_728853.1| RTX toxin membrane fusion protein [Ralstonia eutropha H16]
 gi|113529141|emb|CAJ95488.1| RTX toxin membrane fusion protein [Ralstonia eutropha H16]
          Length = 462

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 72/402 (17%), Positives = 139/402 (34%), Gaps = 13/402 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +      G+++    V  +++   GII +  V  G  + +  PL+  +D   T      +
Sbjct: 69  DEVAVGEGKVIPSSQVQVVQNLEGGIIAEIMVRPGQVVNKDQPLMRIDDTRFTASYQEGR 128

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                L   I    +  D           A   R          + S    +F     + 
Sbjct: 129 TRDDALVARIARLSAEADGTAFVASAPADAEGRR----------FVSEERALFESRKRAF 178

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L +   +         +  ++   LR       ++L MM+ +  +  VS+ DL + E
Sbjct: 179 DANLAVLRQQSEQRRQELTEKRSREQQLRQSHRLVAQELAMMRPMMAQGVVSEVDLLRLE 238

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R       EL         +     E   +A+    +Y  E  ++L Q +   A + +  
Sbjct: 239 RQANDLKGELEAARLAMPRLEAAYRESQQKADELGTHYRAEAMKELNQAKAEQAAQSATN 298

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
           T L+   ++  + +P+AG I   +  +     Q    L++IVP      + A+V P  I 
Sbjct: 299 TALQDRVDRTLVRAPLAGVIKQIKINTVGGVVQPGMDLLEIVPLEDTLLVEARVRPADIA 358

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-SQQDNNLQTQEYYEVILKITDLAFS 399
            ++ G  A V+   Y       F   +E I     + +    + + YY V ++  D    
Sbjct: 359 FLRPGQPAVVKLSAYDFSIYGGFAGTVEHISADTLTPERPGERPESYYLVRVRTRDNRPG 418

Query: 400 DN--NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            +   + +  G  A V       T+   ++ PI       F 
Sbjct: 419 GSAVQVPILPGMVATVDVLTGQKTVLHYLLKPIIKTRELAFR 460


>gi|6409377|gb|AAF07963.1|AF193064_3 membrane forming unit [Caulobacter vibrioides]
          Length = 436

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 63/439 (14%), Positives = 163/439 (37%), Gaps = 13/439 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     +    N  A  +    +  +  +GL+ W+   P++ +V ++G +  E N   ++
Sbjct: 1   MKPPKIQRPTDNFQAVARIGYGIIALTFVGLLGWAAFAPLDSAVIANGVVSAEGNRKTVQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSAL 117
               G++ K  V  G ++  G  L   +  +      + +     +K +   +  E+   
Sbjct: 61  HLEGGMLAKILVREGEKVKAGQVLFELDPTQANAAAGITRNQYVALKAMEARLLAERDQR 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             ++   D+     +         + +  +     F     ++   + +   +       
Sbjct: 121 PSISFPADLTRLRADP-------MVARAIADEQAQFTERRQTIQGQVDLMNAQRLQYQSE 173

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              ++ ++  L+  L   + +L  ++ L++K  V +  L   ER     +  +     ++
Sbjct: 174 IEGIDRQTQGLKDQLGFIEDELIDLRKLYDKGLVPRPRLLALEREQASLSGSIGRLTADR 233

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              ++  ++   +       + +++S+ + + +   A+   K  +    +++  I+SP+ 
Sbjct: 234 SKAVQGASDTQLKVRQIKQEFFEQVSQSITETRVRLAEVTEKEVVASDAQKRIKIVSPVN 293

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT    + F+     + ++PL+ I P  +   I+A   P  + +V  G    VR P +  
Sbjct: 294 GTAQNLRFFTEGAVVRAAEPLVDIAPEDEAFVIQAHFQPTDVDNVHMGMVTEVRLPAFHS 353

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFT 416
                    I+ +         N    +Y+  I+++       +    +  G PA+V+  
Sbjct: 354 REIPILNGTIQSLSQDRISDPQNKL--DYFLGIVRVDVKQLPPHLRGRVTAGMPAQVIVP 411

Query: 417 AKNTTLAQEIIHPITDNWP 435
               T+ Q +  P+ D   
Sbjct: 412 TGERTVLQYLFSPLRDTLR 430


>gi|194333619|ref|YP_002015479.1| HlyD family type I secretion membrane fusion protein
           [Prosthecochloris aestuarii DSM 271]
 gi|194311437|gb|ACF45832.1| type I secretion membrane fusion protein, HlyD family
           [Prosthecochloris aestuarii DSM 271]
          Length = 472

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 69/434 (15%), Positives = 157/434 (36%), Gaps = 15/434 (3%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W  +++  P   + +  +  I I  L+ W+ + P++     +G+++    +  I+S   G
Sbjct: 52  WARIQQ-EPVRARALLKMFGITIALLLIWAAIAPLDEVTRGAGKVIPSSRLQVIESLDGG 110

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++++  V  G  +  G  L+  +    T  +  K+  + +L       ++  +  +   +
Sbjct: 111 VVEEIVVHEGDIVKAGDLLMRIDPTRYTSSLQEKQYEVLSLIARAARLRALAE--DTPLE 168

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + E+  ++   Q++      +    + F   ++ +   L  K   +  +   R+  +   
Sbjct: 169 LPEEELKA-VPQIVTHEKHLYEESRREFESQMTIMREQLSQKEHELEEVQARRIQSQQA- 226

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                      ++L     L    AVS+ ++ + +R V  +  E    +  +  + R + 
Sbjct: 227 ------YGLAAQELNKTAPLLASGAVSEVEVIRLKRDVANARGERDAALARKATLERSVE 280

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E  ++ +    N   +   +L       A        L     +  I+SP+ GT+     
Sbjct: 281 EAREKVHETELNSRNKWRNELADVLSKIASMSQGTKGLADRVLRAEIISPVNGTVQRLYI 340

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     Q +  +  +VP      +  KV+PK I  V  G  A V+   Y        +A
Sbjct: 341 NTLGGVVQPAGRVADVVPLGDSLEVEVKVSPKDIAFVFPGQKALVKLTAYEFSIYGGLEA 400

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            +  I P     +   Q   +Y V +K    +       +  G  A+V       T+   
Sbjct: 401 DVYNISPDTVTDE---QGNTFYLVRVKTHKSSIG-KGFPIIPGMMAQVDILTGKRTVLMY 456

Query: 426 IIHPITDNWPKIFE 439
           ++ PI        +
Sbjct: 457 LLKPILRGTSNAMK 470


>gi|84500426|ref|ZP_00998675.1| type I secretion membrane fusion protein, HlyD family protein
           [Oceanicola batsensis HTCC2597]
 gi|84391379|gb|EAQ03711.1| type I secretion membrane fusion protein, HlyD family protein
           [Oceanicola batsensis HTCC2597]
          Length = 436

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 63/412 (15%), Positives = 154/412 (37%), Gaps = 9/412 (2%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
             +WS+   I  +V + G++  + N   ++    G++ +  V+ G  +  G  L+  +D 
Sbjct: 29  FGSWSVFTQISGAVIAGGQLEVDRNRQVVQHLDGGVVTEILVDEGDLVESGQLLVRLDDT 88

Query: 91  ETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +    +   + +   +   R  ++ E+   + L+    +LE A    E        +   
Sbjct: 89  QLRSQLAIIEGQLFELMARRGRLEAERDGREDLDFDPLLLEAAQTKAEA------RELME 142

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             +++    ++SV + ++    R   I      ++ + +     +   Q +L   ++L +
Sbjct: 143 GQTRLAEARLASVEKEIEQLEKRRSQIDNQIEGIDAQLAAFSEQIELIQDELEDQQSLLD 202

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +     + ++   R   + +  + E   ++      + E+  E         +E    L 
Sbjct: 203 RGLAQASRVSALRRENAQLSGTVGELTAQRAQAEGRMTEIDIEILKLDTTRREEAITRLR 262

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             Q    +   +   L +   +  I +P+AG +   Q ++  +  + + P++ +VP  + 
Sbjct: 263 DLQYRELELKEQRRALIEQLNRLEITAPVAGIVYGLQVYAERSVLRPADPVLYLVPQDRP 322

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             I A+V P  I  ++     T+RF  +      + +  + +I       D+  ++    
Sbjct: 323 LVIAARVEPIHIDQLRIDQPVTLRFSAFDQRNTPELEGRVVQISADAFTDDSTGRSFYRT 382

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           E+ L   +         L  G P E     ++ T     + P  D + K F 
Sbjct: 383 EIELSEGEQDKLPEGSHLIPGMPVEAFIKTRDRTPMAYFMQPFMDYFAKAFR 434


>gi|87198270|ref|YP_495527.1| Type I secretion membrane fusion protein, HlyD [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87133951|gb|ABD24693.1| Type I secretion membrane fusion protein, HlyD [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 446

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 80/428 (18%), Positives = 169/428 (39%), Gaps = 13/428 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            +L+R+  +     + L   ++++PI  +V  +G++  +  V  I  P  G+I +  V N
Sbjct: 27  TNLRRLAAIVGGLFVVLFAMALVVPIGGAVIGNGQVGVQSRVKRIAHPTGGVIAEIAVTN 86

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAF 131
           G  + QG  L+  +D  T        ++++ L   R  ++ E+  L  +    ++L    
Sbjct: 87  GEHVKQGQLLMRLDDRVTGADATYSSLTVEQLLAQRARLEAERLGLGSVTFPPELLNAGT 146

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            S  + + D         + +F        +       R+         +E + + LR  
Sbjct: 147 PSAAKAMAD--------EAHLFRMRSVETAQVRAQLGARVNQYQQEIRGIEAQIASLRKQ 198

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            +  + +   +K+L++K  V+ N LNQ ER        +     +       I E  +++
Sbjct: 199 RTLIEPERQSVKDLWDKQLVTINRLNQLERSAVDLDGSVGALNAQIAQARARITEAQEQS 258

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                    +   +L Q       +  +       +++  I +P +GT+      +  + 
Sbjct: 259 IQVSQQRRVDAGVELAQVNTALNQQRLRSVAANDQQDRSEIRAPYSGTVEKIAFAAIGDV 318

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            + ++P+M+IVP   +  + A + P  I  V KG  A VRF  +      +    +  + 
Sbjct: 319 VRPAEPIMEIVPDRDVMVVEAAIGPADIDQVAKGQVARVRFSAFNRAATPEIAGKVLYVA 378

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               + +N      +Y V + +   A +   ++LR+G PAEV     + +L      P+ 
Sbjct: 379 --TDRTENPESRASFYMVRIAVDQAAIAREKLDLRSGMPAEVYIETGSRSLLSYFTKPLR 436

Query: 432 DNWPKIFE 439
           D + + F 
Sbjct: 437 DQFSRAFR 444


>gi|88657065|gb|ABD47314.1| PrsE [Rhizobium leguminosarum bv. trifolii TA1]
          Length = 433

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 76/435 (17%), Positives = 160/435 (36%), Gaps = 15/435 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR+    +  + +LSI  + G+  W+    +  +V   G I+ +     I+    GI+ +
Sbjct: 9   KRSLNRHVAVVGVLSIALVCGIGGWAATTELSSAVIGEGVIVVDPRCQNIQHLTGGIVSE 68

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV 126
             V     +  G  L+  +   T   + + + ++  L   R  +  E+   +    + ++
Sbjct: 69  LLVSENDHVTAGQVLIRLDGTTTRANLSIVESTLAQLYARRARLKAERIGAESFEVEENI 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +    +  ++LLD          K+F+   S++        +R   +      L  + +
Sbjct: 129 TDLTSSTSAQKLLD-------GEQKLFDSRRSALIGMKSQLASRKDQLAEQIKGLVVQIN 181

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L   +++L  +  L++K  V+ +     +    +S  + R     +        E
Sbjct: 182 ATNDSLGLIEEELGGIDVLYKKGLVTLH-FESAQAGTCRSPGQQRPGNCSKGGGEGKAIE 240

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  ++     +   EI++DL   +   A+   +      +    T  +    T       
Sbjct: 241 IDRQSIQLDEDRRSEIAKDLTDVEAQIAEYEERAEPRSISCTVSTSRAADR-TSSRAFVH 299

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           + +      Q LM +VP +    + AKV  + I  V  G +  VRF  +           
Sbjct: 300 TVNGVIDPGQTLMLVVPENNELTVEAKVATRDIDQVHVGQSVDVRFSAFDQRTTPDVSGE 359

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           I  I P I + +       YY + +K    + +    I+L  G PAEV     + T+   
Sbjct: 360 ITSIAPDIVKDERT--GISYYPLRVKPKPESIARMKTIKLYPGMPAEVFIKIGDRTVISY 417

Query: 426 IIHPITDNWPKIFER 440
           +  P+TD    +F +
Sbjct: 418 LTKPLTDQMQHVFRQ 432


>gi|78356464|ref|YP_387913.1| Type I secretion membrane fusion protein, HlyD [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78218869|gb|ABB38218.1| Type I secretion membrane fusion protein, HlyD [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 446

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 66/430 (15%), Positives = 143/430 (33%), Gaps = 20/430 (4%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L+R        ++    +    L+ W+    ++      G+++    V EI++   GI
Sbjct: 22  AALRRRGHPFAFMLSASVALLFGVLVIWAHFAVLDEVTRGLGQVIPSQRVQEIQNLEGGI 81

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNK 123
           +++  V  G  + +G  L+  ++            K +  K     ++ E      +   
Sbjct: 82  LQEIAVSEGQIVEKGDILVRIDNEAAASFYRDAYSKSLEHKAAIARLEAELEGWREIVFP 141

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            DV++ A    + Q            + +           L++   +         ++  
Sbjct: 142 EDVMQSAPLVIQGQ------------ASIAAAKRQQQQVELRVLENQREQKIKEVQEMVQ 189

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +   L + L    +   + + L EK    + D    E+ V     E+             
Sbjct: 190 RRQNLESSLRVAMEQRDIARPLMEKKVYPRVDYLTLEQKVISLRGEIDSLALNIPRARFA 249

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E  +      A Y  E   ++ + Q         L+       +  + SP+ GT+   
Sbjct: 250 AEEARERIRQREAEYRSEALEEMNRRQVELRSLQETLSAGGDRVTRTDVRSPVRGTVKKI 309

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +     +  + +M+IVP      I A++ P+ I  +  G  ATV+   Y        
Sbjct: 310 NINTIGGVVKPGESIMQIVPLDDTLLIEARIRPQDIAFLHPGQKATVKITAYDFSVYGGL 369

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           +  +E+I     Q ++      +Y V L+   + + +    + +  G  A V       T
Sbjct: 370 EGKVEQISADTIQDND---GNSFYLVKLRTRASAIQYRGEQLPIIPGMMATVDILTGKKT 426

Query: 422 LAQEIIHPIT 431
           +   ++ PI 
Sbjct: 427 VLDYLLKPIL 436


>gi|126736716|ref|ZP_01752455.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. CCS2]
 gi|126713831|gb|EBA10703.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. CCS2]
          Length = 434

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 68/435 (15%), Positives = 167/435 (38%), Gaps = 11/435 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           + + +         L  +I + G  TW+++  I  ++ ++G+I  + N   ++ P  G++
Sbjct: 6   DRRWSARKHFTIGALTLLILVGGFGTWAVMAQISGALITTGQIEVDRNRQVVQHPDGGVV 65

Query: 68  KKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           ++  V+ G  +  G  LL  +         +++ +   I   R  ++ E+     L    
Sbjct: 66  EEIIVDEGDTVAAGDLLLRLDPTVLQSELAIVEGQLFEILARRARLEAERDDAPVLAF-S 124

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DVL +      ++L+D   +       +F   + +   S++    +   I      +  +
Sbjct: 125 DVLHEVGTPEVQRLMDGQDR-------LFQARLETNRGSVEQLTQQRAQIASQLAGIAAQ 177

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              L        ++L+  ++L ++     + +   +R        + +   +       +
Sbjct: 178 QQALSTQQELIAQELSDQQSLLDRGLAQASRVLALQREEANLLGTVGDLTAQSAQAGERM 237

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E+  +     A+  ++    L   Q    +   +   L +  E+  I +P++G +   Q
Sbjct: 238 TEIELQILGLAASRREDAITQLRDLQFNELELSERRRTLRRQLERLDIRAPVSGVVYGLQ 297

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
            F+  +  + + P++ ++P  +   I  +V    I  V  G   T+RF  +   R  + +
Sbjct: 298 VFAPQSVIRPADPVLFLIPQDRPLVIATQVQVVDIDQVFVGQEVTLRFSAFDQKRSPELQ 357

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             +  +     Q + +  +    EV L+   +A   +++ L  G P E      + +   
Sbjct: 358 GTVTLVSADAFQNETSGLSYYRAEVQLEEGQMARLPDDMTLIPGMPVEAFVRTADRSPLN 417

Query: 425 EIIHPITDNWPKIFE 439
            +I P+ D + K F 
Sbjct: 418 FLIKPLADYFNKAFR 432


>gi|170745190|ref|YP_001766647.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium radiotolerans JCM 2831]
 gi|170658791|gb|ACB27845.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium radiotolerans JCM 2831]
          Length = 454

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 78/431 (18%), Positives = 164/431 (38%), Gaps = 13/431 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N  A       L       + TW+    ++ +V S G ++ E +   ++    GI+++  
Sbjct: 30  NWRAYAVAGYALIFATFGVVGTWATFARLDRAVISPGVVVAEGSRKVVQHLEGGIVQEVL 89

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLE 128
           V +G  +  G  LL  + +++    DL +  +     L   +  E+S    L    ++  
Sbjct: 90  VRDGQTVRAGDVLLRIDPVQSRASNDLLRGQLDAALILEARLRAEQSQAQDLLLPPEIAA 149

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +  E     ++D      S     F   ++ +   +    T +  + + +  +E + +L+
Sbjct: 150 RRAEPAVAGMIDDQASQLSERRGSFQAQLALIQARVTQLRTEISGLAVEKASVEQQVALI 209

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                  Q++L  ++ L EKN +  + +   ER   +    +  ++ E       INE  
Sbjct: 210 -------QQELEGLRGLREKNLIPLSRVLMMEREHARLEGVIGRSVAETAKAQNGINEAG 262

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +         + ++  L   ++  A+   KL + +    +  + +   G I   + ++ 
Sbjct: 263 MQTAQLKQKLQEALTAQLLDTRQKIAELREKLIVAQDVLRRHEVRASHQGVIQGLKVYTI 322

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +  +PLM+IVP +    I  +  P  ++ V  G  A V+FP +   R       + 
Sbjct: 323 GQVVRSGEPLMEIVPTNDRLVISVQFAPNDLEAVHAGLRAEVKFPAFQTRRMSAIFGTLT 382

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTLAQEII 427
            +       D       Y+   ++I D    D+    L  G PAEV+ +A   T    ++
Sbjct: 383 MVSRDRLIDDGTK--HAYFAGTVEIDDRQLPDDVRSRLLAGLPAEVVVSAGERTALDYLV 440

Query: 428 HPITDNWPKIF 438
            P  D   + F
Sbjct: 441 APFFDALGRSF 451


>gi|119896938|ref|YP_932151.1| HlyD family secretion protein [Azoarcus sp. BH72]
 gi|119669351|emb|CAL93264.1| putatice HlyD family secretion protein [Azoarcus sp. BH72]
          Length = 471

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 66/426 (15%), Positives = 156/426 (36%), Gaps = 15/426 (3%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W  L++  P   + +  +S I ++ L+ W+ +  ++      G+++    +  I+S   G
Sbjct: 51  WARLQQ-EPLRARAVLKVSAIALLVLLGWAAVAHVDEVTKGDGKVIPSSQLQIIQSVDGG 109

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +++   V  G  +  G  LL  +       +   +         ++ ++  L+ L     
Sbjct: 110 VVESIAVREGEVVEAGQLLLKVDPTRFMSSLLENRAEFLA----LEIKRRRLEALTQGTP 165

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                  S   +L        +   +++    + +     +   ++R       ++  +S
Sbjct: 166 F------SVPAELEKEAADIAAHERRLYESSRAEMDAQQSIARDQLRQREQELNEVRARS 219

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                     Q++L + K L    AVS+ +L + ER V +   E  ++  +   +   I 
Sbjct: 220 ENAARAYELVQQELKVTKPLAASGAVSEVELLRLERDVSRLRGEREQSAAQISRIQSAIA 279

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   +          ++  +L               +L    +   I +P+ GT+     
Sbjct: 280 ESTRKIQEIELTVRNQLRNELSDTMARLGSLTQGSRMLADRVKHAEIRAPMRGTVKRILV 339

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     Q  + + +IVP      + A+V P  I  ++ G +A V+F  Y        +A
Sbjct: 340 NTVGGVVQPGKEVAEIVPLDDALILEAQVKPSDIAFLRPGQSALVKFSAYDFSIYGGLEA 399

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           ++++I         + +   +Y V ++    +  + N+ +  G  AEV       T+   
Sbjct: 400 VVDQISADTV---VDAKGSAFYVVRVRTLHSSLGE-NLPIIPGMVAEVDILTGKKTILSY 455

Query: 426 IIHPIT 431
           ++ P+ 
Sbjct: 456 LLKPVL 461


>gi|313683221|ref|YP_004060959.1| type i secretion membrane fusion protein, hlyd family
           [Sulfuricurvum kujiense DSM 16994]
 gi|313156081|gb|ADR34759.1| type I secretion membrane fusion protein, HlyD family
           [Sulfuricurvum kujiense DSM 16994]
          Length = 448

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 64/437 (14%), Positives = 171/437 (39%), Gaps = 17/437 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    + +R+ L+ +  ++G    W    P+  +V++SG++    +   I+    GI+K
Sbjct: 18  PQTEDRNYRRLGLIVLALLVGVFGVWGAFAPLSSAVAASGKVSVASSNRMIQHLEGGIVK 77

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYD 125
              V++G  +  G  L+  ++ +    + +          L   +  E+     +    D
Sbjct: 78  SILVKDGDSVKAGQELIELDNTQADAQLQIVLAQYYENLGLESRLIAERDGKSSIVFDPD 137

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + +    +    +++          + F+     +    ++   R+  +      LE   
Sbjct: 138 LDKMQNPASRLLIME-------AQRREFHARAQQLIDEKQVLNERIEQLRNQVEGLEAIV 190

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +   +L  S+  ++   + L+++  + +  L   +R   ++  ++     +       I+
Sbjct: 191 ASKTSLSRSYNDEIKEWEVLYQQQLIDKMRLRDIKREKVRTDGDIANAKADIGRAKAQIS 250

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E+  +   +   +++E+  +L   Q   +D  +++  L+    +  + +P+AG +   Q 
Sbjct: 251 EVKAQIIAQRQKFMQEVVSELGDVQAKLSDNRARIFALQDVSNRTKMTAPVAGIVTNLQM 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK-KFK 364
            +        + +M+IVP  +   I  K+    I +V +G  A ++FP ++ ++      
Sbjct: 311 HTIGGIIPPGKAVMEIVPEGEPLIIDVKIAATDIVNVHEGLKAEIKFPGFSHVKSLNVVM 370

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTAKNTT 421
             + +I P     +       YY   +++T         N++ ++ G P + +    + T
Sbjct: 371 GELVQIAPDAVTDEATKSL--YYPAKIRVTAEGQKELMRNHLAIQPGNPVDAMIVVASRT 428

Query: 422 LAQEIIHPITDNWPKIF 438
               +IHP      + F
Sbjct: 429 FMDYLIHPFKYMADRAF 445


>gi|170745558|ref|YP_001767015.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium radiotolerans JCM 2831]
 gi|170659159|gb|ACB28213.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium radiotolerans JCM 2831]
          Length = 442

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 59/405 (14%), Positives = 149/405 (36%), Gaps = 15/405 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID- 97
            +  ++ ++G ++ E N+ +++ P  G++ +  ++ G+++  G  L+  +        D 
Sbjct: 47  ELSGAIIATGSLVVESNIKKVQHPTGGVVAELPIQEGARVQAGDLLVRLDATTARATYDG 106

Query: 98  --LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                  I      ++ E+   D L    ++     E         + +      K+F +
Sbjct: 107 VTKSLWEIAARNARLEAERDGRDSLAIAPELEGAGPE---------VARIVDGERKLFRF 157

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
              ++         R+  +      L  +++      +   ++   +++L++KN +    
Sbjct: 158 RRDALQGQKAQLRERIGQLNEEIKGLAEQAAAKEQETAIIGREYEGVEDLWKKNLIQLTR 217

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +R + +   E    +         ++E   +      N   +++++L +N+   A 
Sbjct: 218 LTSLQRDMSRLKGERGVLVANIAQTKGKVSETELQIIQLEQNLRSDVAKELAENRAKAAT 277

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +        ++  I +P  G +      +        + +M IVP++       +V 
Sbjct: 278 LTEQRITAFDQLQRIEIRAPQTGYVHELAVHTRGGVISPGEQIMLIVPNADSLVAEVRVA 337

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           P+ I  ++ G  A +RFP +      +    + +I   +S+         YY V L +T 
Sbjct: 338 PQDIDRLQTGQAAGLRFPSFDQRTTPELNGRVVRIAADVSEDKRT--GSFYYLVRLGVTK 395

Query: 396 LAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
              +  +  +L  G P E      + T+   +  P+ D   + F 
Sbjct: 396 EELNRLDGAKLMPGMPVEAFIRTADRTVLSYLTKPLVDQARRAFR 440


>gi|117923861|ref|YP_864478.1| HlyD family type I secretion membrane fusion protein [Magnetococcus
           sp. MC-1]
 gi|117607617|gb|ABK43072.1| type I secretion membrane fusion protein, HlyD family
           [Magnetococcus sp. MC-1]
          Length = 439

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 68/414 (16%), Positives = 143/414 (34%), Gaps = 14/414 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +   S +     + W+    +  + +  G+++    V  I+S   G + +  V  G ++ 
Sbjct: 28  LLWCSTLFFAVALLWAAYAEVVEATTGMGKVIPSGQVQRIQSLEPGRLTERLVREGDEVK 87

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G  LL  +D +     +     I  L+  I    +              +       +L
Sbjct: 88  TGDILLRIDDTQFQATYNESAARILALQARIARLTAEAQG---------ASVFEVPGAIL 138

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           +   +  ++   +F     S+  +++++  ++        + E+     +  L   +K++
Sbjct: 139 EQDPELAASEQSLFKSRRQSLLNNIQIREQQIVQRQQELAEAESAILQFQERLHLTRKEI 198

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + + L EK  V +  L   +R       E+    H        + E   +       + 
Sbjct: 199 KLTQPLVEKGLVGEVTLLHAQREEANLKGEITSLQHAIPRARSALIESKSKLEEATLAFK 258

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            ++  DL              + LE    +  I SP+ GT++     +     Q    LM
Sbjct: 259 SQVQEDLNTASSELTRIQQSSSALEDRVTRSAIRSPVNGTVIRVHVNTIGQVVQSGATLM 318

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +I+P      + A++ PK I  +  G  ATV+F  Y        +  +  I       +N
Sbjct: 319 EIMPTEDSLLVEARIDPKDIAFLHPGQPATVKFTAYDFSIYGGLEGELTHISADAITDEN 378

Query: 380 NLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               Q  Y V ++  D +   N   + +  G  A V       T+   ++ PI 
Sbjct: 379 ---GQAAYLVQVRTKDKSMRRNGKVLPIIPGMVASVDVITGQKTILNYLLKPIF 429


>gi|88704023|ref|ZP_01101738.1| Secretion protein HlyD [Congregibacter litoralis KT71]
 gi|88701850|gb|EAQ98954.1| Secretion protein HlyD [Congregibacter litoralis KT71]
          Length = 461

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 65/431 (15%), Positives = 152/431 (35%), Gaps = 14/431 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +    + P   + +     +  + L+ WS    I+      G+++    V  I S   G+
Sbjct: 41  RAAIEDEPLRARGLLYGIALVAVLLLIWSAFAEIDTVTRGQGKVIPSQQVQVIGSQDGGV 100

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I++  +  G  +  G  LL  +   +   +   +V ++ L       ++  +        
Sbjct: 101 IREILISEGDAVQAGDLLLRLDQTRSQATLGENRVELRGLSIKASRLRAMAEGAAFTPTE 160

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L          +L  L        +++   + S     ++ L ++        +L+ + S
Sbjct: 161 L----------MLRELPDVVEQEDQLYQSSLRSRDVEKEIALEQLNQRSEELTELQARES 210

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L       Q++L + + +    AVS+ ++ + ER V ++  EL +   +   +   I E
Sbjct: 211 QLSTEERLAQQELDVTRPMVASGAVSEVEILRLEREVNRARGELAQTRAQINRVTSAIAE 270

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                N     +  E    L +              L    +Q  + +P++GT+      
Sbjct: 271 AQGRVNAVELEFANEAREQLTETMTRINALSEAAEGLSDRVKQTNVTAPVSGTVNQLYYN 330

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +        + ++++VP      +  +V P+ I  +  G  A V+   Y  +     +  
Sbjct: 331 TVGGVVLPGRDIVELVPADDTLLLEVRVRPQDIAFLAPGQRANVKVTAYDFVVYGGLEGR 390

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +E+I       ++      +YEV ++     F  ++  +  G   EV       T+   +
Sbjct: 391 VEQIAADTVLDED---GNAFYEVSVRTEQADFGPDS-PIIPGMTVEVDVITGKKTVLAYL 446

Query: 427 IHPITDNWPKI 437
           + P+     + 
Sbjct: 447 MKPVLRAHQRA 457


>gi|126726165|ref|ZP_01742007.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacterales bacterium HTCC2150]
 gi|126705369|gb|EBA04460.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacterales bacterium HTCC2150]
          Length = 421

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 69/424 (16%), Positives = 152/424 (35%), Gaps = 12/424 (2%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             +   I + G  +WS    I  +V +SG +  + N   I+    GI+    ++ G  + 
Sbjct: 4   GLISLAILVGGFGSWSYFSQISGAVVTSGMVNVDQNRQVIQHIDGGIVTDIMIKEGDSVS 63

Query: 80  QGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           QG+ L+  +  E    +D+   ++  +      +  E      ++   ++LE A +    
Sbjct: 64  QGSVLMRLDPTEIQSALDVVVSQRYEMLARSARLRAESDGQTSISFSQELLEAAKK---- 119

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                + +     S++F+  ++S+ + +     R           E + + L   L    
Sbjct: 120 --FPNVNELVIGQSRLFDARLTSMKQEIDQLSKRRLQFGNQIEGFEAQQTALGRQLELIN 177

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++    + L  K     + +   +R   +    L E           I EL         
Sbjct: 178 EERDAQQILLNKGLAQSSRVLALQREEARMQGALGELAASVAETKGRITELEIGVLRLET 237

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              +E    L   +    +    +  L +   +  I +P++G +   + F+ S+  + ++
Sbjct: 238 RRREEAITTLRDLEFRGVELEENVKSLTERLSRLDIRAPVSGVVYGLRVFARSSVIRPAE 297

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           PLM +VP  +   I  +++P  I  +      T+RF  ++     +    I  + P   Q
Sbjct: 298 PLMFLVPQDQPLVISTRISPLNIDQIHIDQPVTLRFSAFSARNTPELAGKIVLLSPDAFQ 357

Query: 377 QDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
            +     Q ++   + + +       N  L  G P E     ++ +    ++ P  D   
Sbjct: 358 DE--ATGQSFFTSEIVLLENEIDKLGNQRLLPGMPVEAFIQTESRSPIVYLVKPFADYIK 415

Query: 436 KIFE 439
           K F 
Sbjct: 416 KAFR 419


>gi|296274108|ref|YP_003656739.1| HlyD family type I secretion membrane fusion protein [Arcobacter
           nitrofigilis DSM 7299]
 gi|296098282|gb|ADG94232.1| type I secretion membrane fusion protein, HlyD family [Arcobacter
           nitrofigilis DSM 7299]
          Length = 446

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 72/423 (17%), Positives = 158/423 (37%), Gaps = 12/423 (2%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +L +   +    W+    I+      G+++  + +  I+S   GII +  V+ G+ ++
Sbjct: 27  LFVLIVGFFVAFFIWASFSKIDELARGQGKVIPSEKIQTIQSLDGGIISEILVKEGATVV 86

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREE 136
           +G  L+  +       +D  + S+ +L      ++ E      LN +   ++  F    +
Sbjct: 87  KGQALMKIDTTRFRASLDEDQQSMYSLEASKVRLEAE----TKLNIRDKDIKLVF---PK 139

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            L +   K      + F   +  +  +L +  T++       ++L++K   L   ++   
Sbjct: 140 DLEEKSPKNVKHQREFFITKVDELKSALNILETQLGQKVQELIELQSKRDNLEGSMNLLN 199

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +    ++   +  + S  DL   ++ +  +  EL     +       I+E  +    +  
Sbjct: 200 EQYKTVQKFVKAGSKSTIDLIAVKKELNTTRSELESTKIQIPKAKYAIDESKNRILEKLK 259

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           ++  E  ++LE+         SK+   +    +  I SP+ G I      +     +   
Sbjct: 260 SFRSEAFQELEKVNSDLKIYESKVVSGQDKVNKTVIESPVNGIIKQININTIGGVVRSGV 319

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L++IVP S +  + AK+ PK I  +     A V+   Y        +  I +I      
Sbjct: 320 DLIEIVPQSDILLVEAKIDPKDIAFINPKQRAIVKVTAYDFSIYGALEGKIVEISADSIV 379

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
              +   + YY+V++K        N   + +  G  A V       T+   I+ PI    
Sbjct: 380 DKESKVPKSYYKVVVKTNKNYLERNGEKLPIIPGMVASVDIITGQKTILDFILKPILKTK 439

Query: 435 PKI 437
              
Sbjct: 440 QDA 442


>gi|254437002|ref|ZP_05050496.1| auxiliary transport protein, MFP family, putative [Octadecabacter
           antarcticus 307]
 gi|198252448|gb|EDY76762.1| auxiliary transport protein, MFP family, putative [Octadecabacter
           antarcticus 307]
          Length = 430

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 74/433 (17%), Positives = 152/433 (35%), Gaps = 11/433 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           + +    L    L  ++ + G  +W++   I  +V  SG I  + N   ++    GI+  
Sbjct: 4   EWSARRPLTLGILALVVLVGGFGSWAVTAQITGAVIVSGLIEVDQNRQVVQHQDGGIVTH 63

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
             V+ G  + +   L+  +  +    +   + +   I   R   + E+ +   L     +
Sbjct: 64  IIVDEGDVVDKDDLLVRLDAQDLQASLAVVEGQLFEILARRARFEAERDSEGELAFDPLL 123

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +   E         +    +  + +FN  + +V R  +    R   I      +  +  
Sbjct: 124 NDGYAED--------VASLKAGQTNLFNARLETVARQTEALSNRKDQIASQIRGIVAQQE 175

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L   L    ++LT  + L ++     + +   +R   +   +  E           I E
Sbjct: 176 ALGTQLVLIDEELTNQQALLDRGLAQASVVLNLQREKARLQGQTGELAASAGGAEERITE 235

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  E         +E    L   Q    +   + T L +  ++  I +P++G +   Q F
Sbjct: 236 VEIELLSLETARREEAITRLRDLQFQELELRERRTTLLRQLDRLEIRAPVSGIVYGLQIF 295

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
            S    Q +  L+ IVP  +   I A+V P  I  +  G    VRF         +    
Sbjct: 296 GSGVVIQPADALLYIVPQDRPLVIAAQVAPTDIDVLTIGQEVAVRFSALDQRTTPELYGT 355

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  +       + N  +    E+ L   ++    NN+ L  G P E      + T    +
Sbjct: 356 VALVSADAFTDNTNGVSYYRAEIALNEGEITRLPNNVTLIPGMPVEAFIRTADRTPFNYL 415

Query: 427 IHPITDNWPKIFE 439
           + P++D   ++F 
Sbjct: 416 LRPLSDYIARMFR 428


>gi|119387040|ref|YP_918095.1| HlyD family type I secretion membrane fusion protein [Paracoccus
           denitrificans PD1222]
 gi|119377635|gb|ABL72399.1| type I secretion membrane fusion protein, HlyD family [Paracoccus
           denitrificans PD1222]
          Length = 443

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 67/439 (15%), Positives = 150/439 (34%), Gaps = 11/439 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           ++  + R+    L     L ++ + G  +W+   P+  +V + G  +       ++    
Sbjct: 10  LYDRVPRSVRTHLVFGLALLVLSLGGFGSWAFRAPLAAAVMAPGSFVATGRNKIVQHLEG 69

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLN 121
           GII++  V+ G  +  G  L+  +           ++       +   +  E + ++ L 
Sbjct: 70  GIIREILVDEGDAVTAGQVLVQLDRTAAIANRRELELRRARLEAISARLRAEYAGVETLA 129

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               + E   E     ++              +  +  +  ++    +R+         +
Sbjct: 130 FGAFLQEHEDEPSFAAIMAEQQAAFRAARAKLDGEVILLQSNIAASRSRIEGYEGQLAAV 189

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E + +LLR       +D      L ++  V ++D+N   R +  +  E            
Sbjct: 190 ETQLALLR-------EDHGARDTLLQRGLVRRSDVNMLARAIADAEGEAGRIRSLIAETE 242

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             + +   E       + +    + +  +        +    +   E+  I SP+AGTIV
Sbjct: 243 EAVRKAESEIEQVLTQHRQTALDEGQGIEAELDSVREQSLKAQDVLERAYITSPVAGTIV 302

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +     +  +P+++I+P      I   V    I  ++ G  A+VR          
Sbjct: 303 RMHYHTPGGVIEAGKPILEILPLDAPLIIETHVARTDIDEIEIGQKASVRLTSLNQRTTP 362

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
             +  +  +       + +   +E Y V + +        +      G PAEV+      
Sbjct: 363 VLQGHLVYVSADALTTETDGIAREVYVVRIDLPAAELERVHGFRPTPGMPAEVMIETSAR 422

Query: 421 TLAQEIIHPITDNWPKIFE 439
           T AQ +I PI D+  + F 
Sbjct: 423 TFAQYLIKPIEDSLSRAFR 441


>gi|23015806|ref|ZP_00055573.1| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 577

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 78/438 (17%), Positives = 164/438 (37%), Gaps = 20/438 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L  ++P    R     ++ + G  I W+ +  ++    + GE++ E  V  I+    G+
Sbjct: 152 ALANSYPLPTWRPLARVVMSLTGIFIVWAFVSHLDEVAIAEGEVVPEGKVKVIQHLEGGV 211

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNK 123
           +++  V +GS++ +G PL+  +   ++   +  +  +      R  ++ E      LN+K
Sbjct: 212 VREIMVTDGSEVKEGAPLILLDLPVSSLNKEELQARMDGYMLQRARLEAE------LNDK 265

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                +    R+  L++       +  + F     ++  +L +   ++R   L   + E 
Sbjct: 266 PVAFPEEEAKRQPALVE-------SERRSFEARRQALNATLTVLRDQVRQKGLEVQEYET 318

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           KS  +   L   Q+ L M  +L +    S+ D  Q +  V     +L             
Sbjct: 319 KSRSITTSLRLSQERLVMSTDLIKAGLASKMDHVQIQSQVEDLKGQLESVRASIPRAEAA 378

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E       E A + +    ++ + +   A            + +  I SPI G +   
Sbjct: 379 QQEAKGRVAEEMARFQRTAQSEMSEAELNIARTRELFIQATDQQRRTLIASPIDGIVKNM 438

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +S +     +   P+M+IVP  +   + AK+ P    +V++G  ATV+   Y        
Sbjct: 439 RSNTIGGVVRPGDPIMEIVPLHERLQVDAKLNPMDRGYVQEGQRATVKISAYDYTTYGGL 498

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTT 421
              +  + P  +        Q YY V+++       D   +  +  G  A V       +
Sbjct: 499 DGDVILVAPDTT-VPQTPNAQPYYRVVVQTDRAYIGDEQAKRLISAGMQATVEIHTGTRS 557

Query: 422 LAQEIIHPITDNWPKIFE 439
           + + +I P+     + F 
Sbjct: 558 IMEFLIKPVIKLRHEAFR 575


>gi|15966700|ref|NP_387053.1| putative transport protein [Sinorhizobium meliloti 1021]
 gi|307300264|ref|ZP_07580044.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
 gi|307321141|ref|ZP_07600545.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|15075972|emb|CAC47526.1| Secretion protein [Sinorhizobium meliloti 1021]
 gi|306893216|gb|EFN23998.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|306904430|gb|EFN35014.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
          Length = 450

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 74/439 (16%), Positives = 162/439 (36%), Gaps = 12/439 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +  + R+          L  I   G   W+   P+  ++ + G  +   N   ++    G
Sbjct: 17  YAEVPRSIRLHTLLGLALIAISFGGFGYWAFAAPLAAAIIAQGSFVANGNNKIVQHLEGG 76

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           II++  V  G ++  G  L+  +         +++LK++ ++ +   +  E    D  + 
Sbjct: 77  IIEELLVAEGDKVKAGDILVKLDQTVARANARMLNLKRLRLEAVVGRLRAEAVGEDAFSV 136

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              V  +A +     +++       + +  F      +   L +    +RS+        
Sbjct: 137 PQIVARQADDPDVRAIME-------SQNVNFQSKKIKLRDQLNLIDQNIRSLEFRARGYA 189

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            + +     L    ++      L +K  + + +L   +R +  +  E+     E K    
Sbjct: 190 LQQASFNRQLEILNEEREAKSKLADKGLIRRPELMALDRAIADAIGEIGRLESEVKESYT 249

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I+    EA +      +     LE  +        ++    +   + TI SP+ GT+V 
Sbjct: 250 QIDRYRQEAVIAVNTNKQAALDGLEAAEADLDGVREQVREASEVLGRATIRSPVDGTVVR 309

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           +   ++       +P+M+I+P +    I A++    I  +K G  AT+R           
Sbjct: 310 SYFHTAGGVIASGKPIMEILPANVPLIIEAQLLRTAIDQLKVGEDATIRLSALNRRTTPV 369

Query: 363 FKAIIEKIDPIISQQD-NNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
            K  +  +     +++    Q ++ Y V +++        +      G PAEVL T    
Sbjct: 370 LKGKVFYVSADSIEEEVAGGQQRDVYIVRVEVPASEIGRIHGFHPVPGMPAEVLITTSER 429

Query: 421 TLAQEIIHPITDNWPKIFE 439
           T  + +  PITD+  + F+
Sbjct: 430 TFFEYLTKPITDSMSRAFK 448


>gi|170739574|ref|YP_001768229.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium sp. 4-46]
 gi|168193848|gb|ACA15795.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium sp. 4-46]
          Length = 460

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 70/420 (16%), Positives = 165/420 (39%), Gaps = 13/420 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L  +    +  W+  + ++ +V S G ++ E +   ++    G++    V++G  + +G 
Sbjct: 47  LIALTFGVVGGWAARVRLDRAVISPGVVVAETSRKVVQHFEGGMVLDVLVKDGQSVREGD 106

Query: 83  PLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            LL  + +++    DL +  +     L   +  E+     L+   D++ +  E+      
Sbjct: 107 VLLRLDPLQSRASADLFRTQLDAALILEARLRAEQDGAADLDLPPDIVARRHEAP----- 161

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             + +              S+   L +   R+R + +    L  + + + A +    ++L
Sbjct: 162 --IARAIGDQRSQLAERRKSMRAQLDLIAARVRQLRVEMEGLAAERASVEAQVRYIDEEL 219

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +++L +KN +  + L   ER   +    +  ++ E       I E   +         
Sbjct: 220 GGLRSLRDKNLIPLSRLLMMERERTRLQGVIGRSVAETAKAENAIGEAGMQVTQIEQRRQ 279

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           + ++  L + ++  ++   KL + +    +  + +P  G I   + ++     +  +PLM
Sbjct: 280 ESVTAQLLETRQKISELREKLLVAQDVLRRHEVRAPHGGVIQGLKVYTIGQVVRPGEPLM 339

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +IVP      I  + +P+ ++ V  G  A V+ P +   R       +  +       + 
Sbjct: 340 EIVPTRDRLVISVQFSPQDLEAVHAGMRAEVKLPTFQTRRTPAIFGTLRTVSRDRLIDE- 398

Query: 380 NLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               Q Y+  I++I +     D    L  G PAE++ +A   T    ++ P+ D   + F
Sbjct: 399 -ATKQPYFAGIVEIDEHDVPGDVRDRLLAGLPAEIVLSAGERTALDYMVSPLFDAMGRAF 457


>gi|163737146|ref|ZP_02144564.1| Type I secretion membrane fusion protein, HlyD [Phaeobacter
           gallaeciensis BS107]
 gi|161389750|gb|EDQ14101.1| Type I secretion membrane fusion protein, HlyD [Phaeobacter
           gallaeciensis BS107]
          Length = 438

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 76/442 (17%), Positives = 159/442 (35%), Gaps = 9/442 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M+    +    +    L    +  II + G  TWS+   I  +V +SG I  + N   ++
Sbjct: 1   MNQSKTETNSWSARRPLIIGLIGVIILLGGFGTWSVATSIAGAVVASGRIEVDRNRQVVQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSAL 117
               GI+++  VE G  + +G  LL  +  E    +   + +   +   R  +D E+ + 
Sbjct: 61  HLDGGIVQEILVEEGDTVAEGAVLLRLDAKELRSQLVITEGQLFELMARRARLDAERDSA 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + +    ++ + +    E      +        ++F     SV R +     R   I   
Sbjct: 121 ETVEFDTELHDLSETRPE------VADLMQGQVRLFEARKDSVAREIDQLEKRRTQIQDQ 174

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            + +  + +  R  L   +++LT  ++L ++       +    R        L E I  +
Sbjct: 175 IIGVRAQQASRRTQLDLIEEELTNQQSLLDRGLAQAGTVLNLRRTEADLQGSLGELIATE 234

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 I E+  E         +E    L   +    +       L+    +  I +P++
Sbjct: 235 AQAEGRITEIDIEILKLGTQQREEAITRLRDLRYQELELAETRRALKDRLARLDITAPVS 294

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q  +  +  + + P++ +VP  +   I A+V P  +  +  G   T+RFP    
Sbjct: 295 GIVYGLQVHTPRSVIRAADPVLYLVPQDRPLVIAAQVAPTDVDQIFVGQAVTLRFPALDQ 354

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
               +    +++I     +   +  +    E+ L    L        L  G P E     
Sbjct: 355 RSTPELFGSVKQISADAFEDQASKLSYYRTEIELNPGQLETLPEGTVLIPGMPVEGYIRT 414

Query: 418 KNTTLAQEIIHPITDNWPKIFE 439
            + T    ++ P+ D + + F 
Sbjct: 415 ADRTPLGYLVKPLADYFVRAFR 436


>gi|332140532|ref|YP_004426270.1| HlyD family secretion protein [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550554|gb|AEA97272.1| HlyD family secretion protein [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 455

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 77/427 (18%), Positives = 161/427 (37%), Gaps = 15/427 (3%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
            W  + +  P   K +  L  I +  L+ WS    I+      G++++   +  ++S   
Sbjct: 34  EWSRIMQ-TPVKAKGLLYLVSIVLFLLVVWSYFAEIDEVAKGDGKVISSQQLQVLQSYDG 92

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI++   V  G  +  G  LL  +       ++        L   +    +       ++
Sbjct: 93  GIVQDILVAEGQTVKAGQVLLRVDPTRFLSSLEENTTQFAALAAKVQRLSALTQGKALRF 152

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +          ++L +          K++N  ++ +        +R+     +  +    
Sbjct: 153 N----------KELQEQAPSIIENERKLYNSNLAELDEVAAGSDSRIMQRRQDVEEERAN 202

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S  + +LS  +K+L++ K L    AVS+ ++ + ER V +    + ++    +  L  I
Sbjct: 203 LSQYQNVLSLTRKELSVTKPLLASGAVSEIEILRLERQVVELEGNITKSKVAIERGLNAI 262

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E   +        +   +++L       A      T LE    Q  I SPI GT+    
Sbjct: 263 EEEIIKKEESRLRLVNRWNQELTDATGEMATLQQSQTSLEDVVSQADIRSPINGTVQRLL 322

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +          ++++VP      + AKV+PK I  +++G  A ++F  Y         
Sbjct: 323 INTVGGVITPGSAVVELVPQDDQLIVEAKVSPKDIAFIRQGQPAILKFSAYDFTIYGGMS 382

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           A ++ I       D +   + YY V L+ T  + +D ++++  G   +V       T+  
Sbjct: 383 AEVQHISADAITNDKD---ETYYLVRLE-TKRSIADESLDILPGMIVQVDILTGKKTVLN 438

Query: 425 EIIHPIT 431
            I+ P+ 
Sbjct: 439 YILSPLF 445


>gi|13475652|ref|NP_107219.1| rhiziobicin secretion ABC transporter, RspE [Mesorhizobium loti
           MAFF303099]
 gi|14026408|dbj|BAB53005.1| rhiziobicin secretion ABC transporter; RspE [Mesorhizobium loti
           MAFF303099]
          Length = 447

 Score =  299 bits (765), Expect = 7e-79,   Method: Composition-based stats.
 Identities = 65/437 (14%), Positives = 161/437 (36%), Gaps = 13/437 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             + +  A+L     ++ + I+G   W  L  I  +V +   ++ E N+ +++    G I
Sbjct: 20  KARDDIRANLILGASVTAMLIVGGGLWLGLTRIAGAVIAPATVVVESNIKKVQHLTGGTI 79

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKY 124
                ++G  +  G  +   +D  T   + +    +         ++ E+  L  +    
Sbjct: 80  GGIFAQDGDHVRAGDIVARLDDTLTRANLQIISEDLDRATVRLARLEAERQGLPEMQLPS 139

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + E+  +     L+            +F    +++        +R + +      L+ +
Sbjct: 140 GLQERMGDPELAALV-------RGERTLFESRATALTGQKAQLQSRSKQLERQIDGLKAQ 192

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +     +     DL  ++ LF K  VS+  L+       ++  E              I
Sbjct: 193 QAAEDQSVVLLDGDLGDVQALFTKKLVSKERLSNIRLDATRAHGESGRLAAAVAEAQAKI 252

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E   +          E++ +L + +    +   +  + +    +  I +P +GT+  + 
Sbjct: 253 SETELQILQLDDQRRSEVTSELRETEAKQTELSERKVVAQDELTKTNIRAPQSGTVQESA 312

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        + +M IVP +    + A + P +I  V+ G   ++RFP +        +
Sbjct: 313 IHTIGGVIAPGEVIMMIVPDTDNLVVDALIPPSRIDDVRPGQHVSIRFPAFDAGTTPACQ 372

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE-LRNGFPAEVLFTAKNTTLA 423
             +++I   + +         Y+   + + + A    + + L+ G PAEV  +    ++ 
Sbjct: 373 GSVKRISADLIKDQQKQL--SYFSARINVENKAACLTDAKVLKPGMPAEVHISTDERSVW 430

Query: 424 QEIIHPITDNWPKIFER 440
             ++ P+TD   + F +
Sbjct: 431 SYLLKPLTDQMSRAFRQ 447


>gi|220903911|ref|YP_002479223.1| HlyD family type I secretion membrane fusion protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219868210|gb|ACL48545.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 674

 Score =  298 bits (764), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 53/433 (12%), Positives = 136/433 (31%), Gaps = 11/433 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L R     ++ +++   +  + LI W+    ++    + G ++       I++   GI
Sbjct: 235 AALARRPHFGVRALSICVAVMFLCLIIWAAFASVDEVTHAEGTVVGSQRTQTIQNLEGGI 294

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTE-KSALDFLNN 122
           ++   V  G  + +GT L   ++                       ++ E KS       
Sbjct: 295 LRAVMVREGQIVDKGTILAQLDNEMAESAYRDAVNKAMENSLAIARLEAEIKSEPPVFPE 354

Query: 123 KYDVLEKAFESRE--EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +        R   E +L    +        +      +   +++  ++      +  +
Sbjct: 355 HLEAWASQLIGRRVDESVLARARQIMQDQENAYQVRRVQLNAEVEVLQSQYTQRMHDVEE 414

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              +   L   L+   +       L ++N  S+ +    ++ V +   ++          
Sbjct: 415 QTARKVQLDRSLALAIEQRDTAYALVQRNNFSKMEYLGLQQRVVELQGQIDALAAAIPKA 474

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                E         A     I+ ++ + ++        ++       +  + +P+ GT+
Sbjct: 475 QAAAEESRQRIASRRAEQASAITEEINKRRQELNSLRESISAGRDRVTRTELRAPVRGTV 534

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 +     +  +P+M IVP      + AKV P+ +  ++ G    V+   Y     
Sbjct: 535 KQIYISTVGGVVKPGEPIMDIVPLDDTLLVEAKVKPQDVAFLRPGQDVMVKVSAYDFSIY 594

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAK 418
              +  +E I     +     + + +Y V ++    A       + +  G          
Sbjct: 595 GGLEGKLESISADTIED---KKGEHFYLVKVRTQKNAIVYHKEYLPIIPGMIVTTDILIG 651

Query: 419 NTTLAQEIIHPIT 431
             T+   ++ PI 
Sbjct: 652 KKTVLDYLLKPIL 664


>gi|254458941|ref|ZP_05072364.1| type I secretion membrane fusion protein, HlyD [Campylobacterales
           bacterium GD 1]
 gi|207084212|gb|EDZ61501.1| type I secretion membrane fusion protein, HlyD [Campylobacterales
           bacterium GD 1]
          Length = 446

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 61/441 (13%), Positives = 153/441 (34%), Gaps = 21/441 (4%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +   +    P+ + R+  + I+ I  LI W+ L  I+     +G+++       I++ 
Sbjct: 19  NSLSSAILVQTPSRVSRVLKIWIVTIFLLIIWASLAEIDEITRGNGDVIPYGQNQVIQNL 78

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALDF 119
             GI++   V+ G  + +   +L   + ++T      +     ++  R  +  E + L+F
Sbjct: 79  EGGIVESILVKEGESVKKDQIILKISNAKSTSSSKTNEMKFQELQAKRLRLYAEANELEF 138

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            + +    E             L        +++              L ++       +
Sbjct: 139 KDMETTFPE-------------LKAQIKLAKELYESSKLEFNAKDNSFLEQIEQRKQEYI 185

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           + + + + L+  L    +++ M   +  +   S+ D  + +R       ++         
Sbjct: 186 EAKARVASLKKSLEYVSEEIAMTAPMVREGVKSKVDFLKLKREANGIENDIEAAELSLPR 245

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           +   I E   +       ++    ++L +     +   ++        E+  + SP+ G 
Sbjct: 246 LASAITEYRQKRIESKQLFINNAKKELNEVTAELSRLETQQVAFSDQVERTMVKSPVDGI 305

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I      +     +    L++IVP ++  ++  K+ P  I  +  G  A V+   Y    
Sbjct: 306 IQKLFINTVGGVIKPGDDLVEIVPTNEKLFLEVKIKPSDIAFLHPGAEAKVKVSAYDFAI 365

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTA 417
                  +  I P             +Y + ++     L   ++ +++  G    V    
Sbjct: 366 HGGLIGKVVNISPDTITDSKENT---FYIIHIETEKNYLGTKEHPLQIIPGMTVNVDIVT 422

Query: 418 KNTTLAQEIIHPITDNWPKIF 438
              T+ Q I+ PI  +   +F
Sbjct: 423 GQKTVMQYILKPILKSKQYVF 443


>gi|118592171|ref|ZP_01549564.1| Type I secretion membrane fusion protein, HlyD [Stappia aggregata
           IAM 12614]
 gi|118435143|gb|EAV41791.1| Type I secretion membrane fusion protein, HlyD [Stappia aggregata
           IAM 12614]
          Length = 441

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 69/436 (15%), Positives = 164/436 (37%), Gaps = 15/436 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+R+         L+  I   G   W+ L  +  +  ++G++  + ++  ++    GI++
Sbjct: 11  LRRSIRFHWALGFLVVAICFFGTGIWASLAELSSAAIAAGKVSPDGSLRVVQHLEGGIVR 70

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +  V+ G  +  G  L+  +    T     I  K       R  +  ++   ++   K  
Sbjct: 71  ELNVKEGDFVKDGQVLMVLDQALATANYLSIYRKHQRYSVTRDRLLAQERGDEYFEVKMP 130

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            +    +S  + + + + K        F      + R  K    +   +      LE + 
Sbjct: 131 SVMSVDKSYRQFVDNEITK--------FKVRRELLDRQTKTYRVQAGQVEAEIKSLEAQI 182

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             +   +    ++L   K L +K  + Q +L   +R   +   E            + I 
Sbjct: 183 DGMDEQIVLLDQELESKKVLMKKGLMRQPELLALQRKRAELWSERNAIGSTIARARQKIE 242

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E+        +   ++++++L +     A     L+       +  I+SPI G ++    
Sbjct: 243 EIKIAELTSVSEEREKVAKELSEINAEIAQADEALSATSDILSRTEIISPIEGRVLKVNY 302

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     +  +P++ IVP ++   +  ++    I +V  G  A V+   +     K  K 
Sbjct: 303 KTVGGVVRPGEPIITIVPENEELILDTRLRTSDIDNVMIGMGAKVQLTSFMGRHMKPLKG 362

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            + ++      + ++   ++YY V +++T  D+  +    EL  G PA+V       T  
Sbjct: 363 HVFQVGADA--ETDDQTGEQYYTVRVRVTSDDILAAGGGFELVPGMPAQVFIQTGAHTPM 420

Query: 424 QEIIHPITDNWPKIFE 439
           + ++ P+  ++ + F 
Sbjct: 421 RYLLDPVLQSFGRAFR 436


>gi|32455993|ref|NP_861995.1| rb120 [Ruegeria sp. PR1b]
 gi|22726345|gb|AAN05141.1| RB120 [Ruegeria sp. PR1b]
          Length = 535

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 63/409 (15%), Positives = 142/409 (34%), Gaps = 13/409 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W++L  I  +V +SG I  E N   ++    G + +  V  G ++  G  L+  +     
Sbjct: 129 WAMLHSISGAVVASGRIEVEHNRQVVQHIDGGTVDEILVAEGDRVTAGDLLIRLDSSALR 188

Query: 94  DLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             +   + +   +   R  ++ E+   + +    ++   A    +      + +      
Sbjct: 189 SELVITEGQLFELMARRGRLEAERDGAEEITFDPELKTTAATRPD------VAELMQGQV 242

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             F    S+  +  +    R+  I      L+ + +  R  L     ++   + L EK  
Sbjct: 243 NQFEAARSAEAKQREQLHKRISQIEQQISGLQAQQASARRQLELISSEVESQQGLLEKGL 302

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +    R        L E +  +      I EL  +     +   +E    +   +
Sbjct: 303 TQAAQVLNLRRTKASLEGRLGELVANEAQSRGRITELEIQILNLDSARREEAITRMRDLR 362

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +       L+    +  I++P++G +      +     + ++PL+ +VP  +   I
Sbjct: 363 YQELEMAETRRNLKDRLSRLDIVAPVSGVVYGLTVQTPRAVIRPAEPLLYLVPQDRPLII 422

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            AKV    I  +  G   ++R P        +    +  I     + +     + +Y V 
Sbjct: 423 AAKVHTTDIDQIFIGQPVSLRLPALDQRSTPELSGQVVLISADAFRDETT--GEPFYRVE 480

Query: 391 LKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           + +   ++A    +I L  G P E     ++ T    ++ P TD + + 
Sbjct: 481 IALDPEEVARLPEDILLIPGMPVESYIRTQDHTPMAYLLKPFTDYFVQA 529


>gi|84685325|ref|ZP_01013223.1| type I secretion membrane fusion protein, HlyD family protein
           [Maritimibacter alkaliphilus HTCC2654]
 gi|84666482|gb|EAQ12954.1| type I secretion membrane fusion protein, HlyD family protein
           [Rhodobacterales bacterium HTCC2654]
          Length = 461

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 79/425 (18%), Positives = 157/425 (36%), Gaps = 13/425 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             L  +I + G  TWS+   I  ++ + G I +E N   ++ P  G+I+  +V+ G  + 
Sbjct: 43  GLLALLILVGGFGTWSVTTDISGAIIAPGGIESEQNRQVVQHPDGGVIQSIEVKEGDIVE 102

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            G  L+  +  E    + + +  +  L   R  ++ E+   D +     ++E+A    + 
Sbjct: 103 AGDILVRLDPEELQSELTIVQNQLFELVARRGRLEAERDGTDEITFDDLIVEEARVHPDA 162

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q      ++     ++F+    S+    +    RM  I      +  + + L   L    
Sbjct: 163 Q------EFMDGQQRLFDQRRESLASETEQLRKRMSQISSQNEGIAAQQAALETQLRLIS 216

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L   ++L E+N V  + +   ER       +  E           I E+  E      
Sbjct: 217 EELVNKRSLLERNLVQSSVVLALERDKAALEGQSGELTAAIAQNEGRITEIEIEILKLGQ 276

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              ++   +L        +   +   L     +  I +P++G I   Q F+     + +Q
Sbjct: 277 ARREQAIENLRDLGYQELELAERRRALIAQLGRLDIRAPLSGAIHAMQVFAEREVIRSAQ 336

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           PL+ IVP  +   I A+V P  I  +  G   T+R   +      +    +  I      
Sbjct: 337 PLLYIVPQDQALVIGAQVDPIHIDEIHVGQEVTLRLAAFDRRNTPELIGRVMTISADALT 396

Query: 377 QDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            +N    + +Y V + + D           L  G P E      + +    ++ P+ D +
Sbjct: 397 DENT--GRSFYRVRIALEDGEVEKLPEGTVLVPGMPVESYLRTADRSPLAYLVKPLADYF 454

Query: 435 PKIFE 439
            K F 
Sbjct: 455 NKAFR 459


>gi|116250394|ref|YP_766232.1| HlyD family secretion protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255042|emb|CAK06116.1| putative HlyD family secretion protein [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 486

 Score =  298 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 73/428 (17%), Positives = 173/428 (40%), Gaps = 12/428 (2%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           ++    LL ++ I+GL  WS+L P++ +  +SG I  E +   I+    GI+++  V+NG
Sbjct: 65  AVWTGNLLILVFIVGLGIWSVLAPLKSAAIASGVIEPESSRKTIQHLEGGIVRRILVKNG 124

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             ++ G  ++  +D ++    D  +  +   +  R  +  E++  D +    D+      
Sbjct: 125 DAVMGGQIVIELDDTKSRSERDSIQGQLWDAEGSRARLLAEQTGGDRVAYPDDLRAAMDR 184

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
                    +        K+F      +   +++   ++  +    + L  + + L    
Sbjct: 185 ------YPSVSAILIGQQKIFEARRRVMQAEIQIANEKIAQVRQEIVGLGAQKAALADRA 238

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +   ++L  +  L  K    ++ L   +R       +  +   +     + I+    +  
Sbjct: 239 TISSQELDQVTILSAKGLERRSRLLNLQREKADLDGQQGQVEAQISRAYQVISGSQADLA 298

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              ++ L E+++ +   +        +L  ++    +  I +P  GTI+  +  +S    
Sbjct: 299 KLESDRLSEVAQGMRDTESRIMQLRERLRAIDDQLSRTDIRAPEDGTIMNLRVHTSGGVI 358

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              +PL+ ++P +    + A V P+ I  V+ G  A V    Y   R    K  +E +  
Sbjct: 359 GAGEPLVDLLPRTDRLVVSAHVRPEDIHLVRAGLEAQVHLLPYNQRRVPLLKGRVEYVSA 418

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
              +  +    Q Y+   +++TD   +  +++EL  G P + L     +++A   + P+ 
Sbjct: 419 D--RLTDPQSGQPYFAATIRVTDERLAKMSDVELVAGMPTQTLIETGQSSVALYAVRPLL 476

Query: 432 DNWPKIFE 439
           D++ + F 
Sbjct: 477 DSFNRAFR 484


>gi|317152613|ref|YP_004120661.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316942864|gb|ADU61915.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 442

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 57/414 (13%), Positives = 140/414 (33%), Gaps = 15/414 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +++  ++   G + W+ L  ++      G+++    V EI++   GI+ +  V  G ++ 
Sbjct: 32  ISISIMVMFCGFLLWAKLAMLDEVTRGFGKVIPSQRVQEIQNLEGGILSEIFVNEGQEVE 91

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L    + +               R  I    + ++ ++  +D          ++LL
Sbjct: 92  KGDLLCRLSNEQAASFYRDAMSKSLEHRAAIARLIAEVEGVDPVFD----------DELL 141

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           +   +       +           L + + +         ++E +   L   L   +K  
Sbjct: 142 EKAPQLVGDQLGIARAQREQQAIELSLLMDQYEQKEQEVNEMEGRRRQLVKSLEVAEKQR 201

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + K L EK   S+ D    E+ V +   ++         + R   E         A   
Sbjct: 202 NIAKPLVEKQIHSELDYLALEQRVLELKGDVEALTLGIPRVKRAAKEAQGRIEQRKAELR 261

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            +   ++ + ++        ++       +  + SP+ G + +    +     Q  + +M
Sbjct: 262 SKALEEINERRQELLSINETISSGGDRVTRTDVRSPVRGIVKHILINTLGGVVQPGKSIM 321

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +++P      + A++ P  I  +     A V+   Y          I+E I         
Sbjct: 322 EVIPLDDTLLVEAQIKPADIAFLHPKQEAKVKITAYDFSIYGGLDGIVEHISADTI---T 378

Query: 380 NLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           N +   +Y V ++    +       + +  G  A+V       ++   ++ PI 
Sbjct: 379 NEKGDSFYVVRVRTDTSSMMYHGKRLPIIPGMTAQVDILTGKKSVLDYLLKPIL 432


>gi|254283548|ref|ZP_04958516.1| HlyD family secretion protein [gamma proteobacterium NOR51-B]
 gi|219679751|gb|EED36100.1| HlyD family secretion protein [gamma proteobacterium NOR51-B]
          Length = 494

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 63/441 (14%), Positives = 158/441 (35%), Gaps = 19/441 (4%)

Query: 2   HHFMWKNLK-----RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV 56
            H  W +L         P   +R+  +  + ++ L+ W+    I+      G+++    V
Sbjct: 64  RHLGWDDLADQASIEQEPMRARRLLYVVGLVVVALLLWAGFAEIDTVTRGQGKVIPSRQV 123

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I S   G++++  V  G  + +G  LL  +   +   +   +  ++ L       K+ 
Sbjct: 124 QVIGSQDGGVVREILVSEGDIVREGDLLLRLDQTRSQSSLGENRAELQALTVKAARLKAL 183

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           ++    +Y            +++  +        +++  G+  +    ++   ++     
Sbjct: 184 VNGTTFEYT----------PEMIAEVPDVVDQELQLYASGLEQLEVEQQIAEQQLTQRLE 233

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              +LE +   L   L    ++L++ + +    AV+Q ++ + +R V K+T EL +   +
Sbjct: 234 ELTELEAREGQLSRELGLAAQELSVTRPMVASGAVAQVEILRLQREVNKATGELDQTRAQ 293

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +   + E           +  E    L +              L     Q  +++P+
Sbjct: 294 LRRIQAAVAEARSNIEEVRLEFANEAREQLTETISRINGLREAAEGLTDRVRQTNVVAPV 353

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+      +        + ++++VP      +   + P+ I  +  G  A V+   Y 
Sbjct: 354 TGTVKQLYYNTVGGVVLAGRDIIELVPADDTLLLEVNIKPQDIAFLAPGQIANVKVTAYD 413

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +     +  +E+I       +       +YEV+++     F  +   +  G   EV   
Sbjct: 414 FVVYGGLEGRVEQIGADTVVDEE---GNAFYEVLVRTEQADFGPDK-PIIPGMTVEVDIL 469

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
               T+   ++ P+     + 
Sbjct: 470 TGKKTVLSYLMKPVLRAHQRA 490


>gi|238789617|ref|ZP_04633401.1| HlyD family secretion protein [Yersinia frederiksenii ATCC 33641]
 gi|238722370|gb|EEQ14026.1| HlyD family secretion protein [Yersinia frederiksenii ATCC 33641]
          Length = 440

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 64/410 (15%), Positives = 152/410 (37%), Gaps = 15/410 (3%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W+ L P++  ++  G I+  +N   ++    G I++  +  G ++++G  L+T +D  
Sbjct: 40  LLWAGLAPLDKGIAVMGHIVVAENRKVVQPLQGGRIQQLHIVEGDEVIEGQLLITLDDTT 99

Query: 92  TT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
                D +  + +S       +  E+  L  +    ++L+   +   E+ +    +    
Sbjct: 100 IRSHRDNLQQQYLSALAQESRLTAEQHDLPTIIFPPELLQYPEQPLAERNIVLQQQLFQH 159

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             +     ++ +   +    +R+         L+      +      Q+ L  ++ L + 
Sbjct: 160 RRQAQLSEVARLSAQMVRHESRLD-------GLQTIRGHNQRQFDLFQRQLQGVQLLAKN 212

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
              SQ+ L   ER        + +N  E   + + I E+          +  E    L +
Sbjct: 213 GHASQSQLLDMERQSISLRANVEKNTSEILELHKQIGEIEQHILQRREQFKSENREQLAK 272

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            Q T  +   +L + E       I +P++G+++     +        Q LM++VP+ +  
Sbjct: 273 AQHTTQELKQRLGVAEYELTNTRIFAPVSGSVIALAQHTVGGIVSTGQTLMELVPNGQPL 332

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
              A++    I  V  G    + F  +      + +  + ++     Q  + L  + YY 
Sbjct: 333 LAEAQLPVSLIDKVTVGLPVDLNFSAFNQSNTPRLQGAVLRVGADRIQHPHTL--EPYYP 390

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           + + I +       + +R G   ++       +L   +  P+TD     F
Sbjct: 391 LTVTIDNPT---TPLVIRPGMSVDIFIRTGERSLLNYLFKPLTDRLYVAF 437


>gi|254452569|ref|ZP_05066006.1| type I secretion membrane fusion protein, HlyD [Octadecabacter
           antarcticus 238]
 gi|198266975|gb|EDY91245.1| type I secretion membrane fusion protein, HlyD [Octadecabacter
           antarcticus 238]
          Length = 420

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 77/424 (18%), Positives = 147/424 (34%), Gaps = 11/424 (2%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
              L  +I + G   W+    I  +V  SG I  + N   ++    G +    V+ G  +
Sbjct: 3   LGILALVILVGGFGGWAGTAQITGAVIVSGLIEVDQNRQIVQHQDGGTVTDILVDEGDVV 62

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            +   LL  +  +    + + +V +      R   + E+ +   L     + E   E+  
Sbjct: 63  EKDDLLLRLDAQDLQASLAVVEVQLFETLARRARFEAERDSTVGLVFDPLLDEGDPET-- 120

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                 +    +  + +FN  + ++ R  +    R   I      +  + + L   L   
Sbjct: 121 ------VASLKAGQTNLFNARLDTIARRTEALSNRKDQIASQIRGILAQQNALGTQLGLI 174

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            ++LT  + L ++     + +   +R   +   +  E           I E+  E     
Sbjct: 175 DEELTNQQALLDRGLAQASVVLTLQRETARLQGQSGELTASAGGAEERITEMEIELLSLE 234

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A   +E    L   Q    +     T L +   +  I +P+ G +   Q F S    Q +
Sbjct: 235 AARREEAITRLRDLQFNELELRENRTTLVRQLARLEIRAPVGGIVYGLQVFGSGVVIQPA 294

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            PL+ IVP  +   I A+V P  I  +  G    VRF         +    +  +     
Sbjct: 295 DPLLFIVPQDRPLVIAAQVAPTDIDVLTIGQEVAVRFSALDQRTTPELYGKVALVSADAF 354

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             + N  +    E+ L   +LA   +N  L  G P E      N T    ++ P++    
Sbjct: 355 TDNANSASYYRAEITLNDGELARLPSNATLIPGMPVEAFIRTANRTPFNYLLKPLSGYIA 414

Query: 436 KIFE 439
           ++F 
Sbjct: 415 RMFR 418


>gi|149188795|ref|ZP_01867086.1| type I secretion membrane fusion protein, HlyD [Vibrio shilonii
           AK1]
 gi|148837456|gb|EDL54402.1| type I secretion membrane fusion protein, HlyD [Vibrio shilonii
           AK1]
          Length = 435

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 84/428 (19%), Positives = 161/428 (37%), Gaps = 12/428 (2%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +K   +L+++ + G + WS  + +  +  + G ++ E     ++    G +K+  V  G 
Sbjct: 9   IKSGIVLTLLTVFGFVWWSTSVELSSASIAKGVVVVESKRKPVQHLEGGYVKQIFVREGQ 68

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G  L+   +           + + +    ++ +K  L  L  +  V++ +   R E
Sbjct: 69  HVEVGEVLVELSNSRAEADFQRLDLKLMS----LEFQKRRLKALLEERSVVDWSMGDRTE 124

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYR------SLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              + + +     + V N  +           S    L R   +       + +   +  
Sbjct: 125 LATNTIERTQILSNIVSNEQVQFQQALLKSELSQGQYLQRKALLDEQVRGGQFQKRAVER 184

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            LS  ++++ M K L +K  VS+  + + +R + +   EL E   + +  LR +N L   
Sbjct: 185 QLSLVKQEIDMTKGLVDKGYVSKTRMLELQRALARIDAELAEVNADIEVGLRQLNALEQT 244

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              +     +  + +L   Q+   D    L      RE+ TI S   GT+V         
Sbjct: 245 HKAQRLEQQQSYAAELASTQKEARDVKEALKAASDVRERVTIRSEHQGTVVGVNIAGVGA 304

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                  LM+IVP S    I A V P+ I  V+ G  A VR   Y   +       +  +
Sbjct: 305 VVNPGDILMQIVPDSDELIIEALVPPQDIDVVRVGLEAKVRLSAYNIRKTPPVDGEVTYV 364

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                  D +      Y+V +++   A     NIEL  G   EV    +  TL   +  P
Sbjct: 365 AADRLGDDADDNVVG-YKVQVRLNAEALHQLENIELYPGMQTEVFIVLEQRTLWDYLTAP 423

Query: 430 ITDNWPKI 437
           +T ++ + 
Sbjct: 424 LTVSYYRA 431


>gi|89070943|ref|ZP_01158172.1| type I secretion membrane fusion protein, HlyD family protein
           [Oceanicola granulosus HTCC2516]
 gi|89043493|gb|EAR49706.1| type I secretion membrane fusion protein, HlyD family protein
           [Oceanicola granulosus HTCC2516]
          Length = 443

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 66/410 (16%), Positives = 155/410 (37%), Gaps = 11/410 (2%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           TWS+   I  +V +SG I  + N   I+ P  G++ +  V+ G ++  G  L+  +  E 
Sbjct: 40  TWSVSARITGAVIASGRIEVDQNRQVIQHPDGGVVAEILVKEGDEVAAGEMLIRLDPDEL 99

Query: 93  TDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              +   + +   +   R  ++ E+   D +     +         EQ  + + +     
Sbjct: 100 LSELAVIEGQLFELMARRGRLEAERDGADEIVFDPVL--------REQPPEKVAELMEGQ 151

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            ++F     S+    +    R   I    + +E + + L   L   +++L   ++L ++ 
Sbjct: 152 QRLFQARRESISSEKEQLAKRRDQIADQIIGIEAQEAALDRQLELLEEELADQQSLLDRG 211

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
               + +   +R     +    E +         I E+  +         +E    L   
Sbjct: 212 LAQASRVIALQREQANLSGTRGELVASVAQAEGRITEIEIQLIGIDRARREEAISTLRDL 271

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   ++   +   L +  ++  I +P++G +     F+  +  + + P++ +VP  +   
Sbjct: 272 QYNESELAERRRALLRQLDRLDIRAPVSGIVYGMTVFAPRSVIRPADPVLYLVPQDRPLV 331

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I  ++TP  +  V+ G    +RF  +   R  +    +  +     Q + N  +    E+
Sbjct: 332 ITTQITPTDVDQVRVGQEVALRFSAFDQRRTPELYGEVVTLSADAFQDEQNRASYYRAEI 391

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +L   +       + +  G P E     +  T  + ++ P++D + K F 
Sbjct: 392 VLNEGEAERLPEGMTMIPGMPVETFIRTEERTPMEYLLKPLSDYFAKAFR 441


>gi|319781761|ref|YP_004141237.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317167649|gb|ADV11187.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 449

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 64/419 (15%), Positives = 144/419 (34%), Gaps = 14/419 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +  +       W+ L P++ +  + G I    +   I+    GII +    NG  +  G 
Sbjct: 37  IMFLFFGVAGGWAALAPLDSAAVAPGVIKVAGDRKLIQHLEGGIIAELNAANGDVVKAGK 96

Query: 83  PLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            L+  +D +    +DL +  I   + L   +  E+     +     +L     + ++ + 
Sbjct: 97  ILVRLDDTQAKAQLDLIQNRIATREALAARLRAERDGRAEIEFDPALLANPATAAKDAV- 155

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                  S    VF     ++    ++   R          LE         + + + + 
Sbjct: 156 -------SAQRDVFAAKHHNLADEQEILSQRRHQTEEEIKGLEELIVTKDKQIEAIEGET 208

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +++L +K   ++       R   +   E   NI         + E+  +        L
Sbjct: 209 KDLESLLKKGLTTRERNLLLRRQQQEIEGERATNIAAIARARSAMAEIDMQILNLDTVRL 268

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E   +L + +    D   +         +  +++P+ G ++  +  ++    +    LM
Sbjct: 269 NESVDELSKVEAELFDLRQEERAARDVLTRTDVVAPVDGIVMDLKVHTAGGVVKPGDTLM 328

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IVP  +   + A V P+ ++ +  G  A V FP +A       + ++E +      ++ 
Sbjct: 329 TIVPLGQQLVVEAMVKPEDVETIAPGQPARVSFPAFARYNLPPLEGVVEIVSADRMVEER 388

Query: 380 NLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
                 Y+   + I           +L  G  +E +      T+   +  PIT N+ + 
Sbjct: 389 --SGAPYFAATVVIDKSELGKLEGRKLLPGMSSETMIRTGARTVLSYLAEPITQNFRRA 445


>gi|261339669|ref|ZP_05967527.1| membrane fusion protein [Enterobacter cancerogenus ATCC 35316]
 gi|288318495|gb|EFC57433.1| membrane fusion protein [Enterobacter cancerogenus ATCC 35316]
          Length = 437

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 72/443 (16%), Positives = 165/443 (37%), Gaps = 14/443 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEI 59
           MH+         +     R+   + + G+   + W+ L P++  V +SG ++ +     I
Sbjct: 1   MHNREALLTPAVNVHPFVRLGWTVLLAGLGTFLLWAALAPLDKGVVASGTVMVDGYRKAI 60

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSA 116
           ++P  G++K   V+ G  + +G  L+      T   +   ++        +  +  E + 
Sbjct: 61  QAPTGGVVKHIAVKEGQTVHKGDLLVLLSQRSTLAQLSAARLQYLTALIAQSRLQAELAG 120

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           +  L           E++++ L + +        ++      ++  + +     +  +  
Sbjct: 121 VSELQLPP-------EAQQDTLKEVIHPIIVQQRQLMTARKEALESAQQNDAQAIAGLER 173

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            R  L   +    + L+   + L  +K L  +    +N     +        +L E    
Sbjct: 174 QRDALVRTAETKASGLALLNRQLKDLKPLMAEGYFPRNRYLDIQVQFASLAGDLGETRSR 233

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                  I +L        A+  KEI   L+Q +   ++   +LT+ +    Q  +++P 
Sbjct: 234 IVESGNQIAQLQRSMQQRLADNRKEIETQLDQLRLQISESKKQLTLSDVDLSQTRVVAPQ 293

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G ++     S S      + L+++VP S    + +++    I  V KG   T+ F  + 
Sbjct: 294 DGVVMNLALASESAVVSAGEQLLELVPQSSSLIVDSQLDVSLIDKVHKGMPVTLMFTAFN 353

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLF 415
             +  K  A +  +     +Q +    + YY++ + ++          +++ G P EV  
Sbjct: 354 QQKTPKIPAQVSLVSAD--RQTDPATQKPYYKIQITVSPDGMKTLEKEDVKPGMPVEVFI 411

Query: 416 TAKNTTLAQEIIHPITDNWPKIF 438
            A    L   ++ PI D   + F
Sbjct: 412 KAGERPLLSYLMKPILDRASQSF 434


>gi|114706017|ref|ZP_01438920.1| ABC transporter, membrane spanning protein (bacteriocin)
           [Fulvimarina pelagi HTCC2506]
 gi|114538863|gb|EAU41984.1| ABC transporter, membrane spanning protein (bacteriocin)
           [Fulvimarina pelagi HTCC2506]
          Length = 440

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 75/418 (17%), Positives = 148/418 (35%), Gaps = 16/418 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
            +I+ ++G   WS+   +  +V + G++     V E++    GIIK+  VE GS I  G 
Sbjct: 32  FAILLVVGCGGWSVQAKLSGAVIAQGQVTVRTQVKEVQHRDGGIIKEILVEPGSTIEAGD 91

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            LL  ++ +T   + + +  +  LR     +  E+     +             R+ +  
Sbjct: 92  VLLRLDETQTRAELGVLRSQLAELRGRKARLIAERDGAAEV----------VVERDAEGN 141

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                      ++F    ++     K    ++         LE +     A  +    DL
Sbjct: 142 TISETILKGEQRLFGDNRATRDAQRKQLQAQIDQFAEQIRALEAQQQSNAAERALVADDL 201

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +  L  +  V  +     ER + +      E       +   I+E   +         
Sbjct: 202 DRLMPLVRRQVVEASRTRTLERDIARLDGLTGEIAANIARVRGQISESELKIIELDQQVR 261

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            +  R+L   +   A+   +        ++  + +PI+G +   +  +       ++ +M
Sbjct: 262 TDAQRELRDVEGKIAELRERAVAALDRMDRMDLRAPISGIVNEVRVHTIGGVIASAETVM 321

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IVP  +   + A+++P  I  V+ G TA +RF  +      +    +E +    S   +
Sbjct: 322 TIVPEGEELVVEARLSPVDIDQVEPGQTAKLRFSAFNQHTTPEIAGTVEIVGAAAS--LD 379

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
               Q YY   + I D         L  G P EV    K  T    ++ P TD   + 
Sbjct: 380 QATGQAYYLATIGIPDDTVISRR-SLVPGMPVEVFLQTKERTALSYLVKPFTDQMQRA 436


>gi|452929|gb|AAB28773.1| protease SM transporter [Serratia marcescens]
 gi|560501|emb|CAA57067.1| hasE [Serratia marcescens]
          Length = 437

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 68/430 (15%), Positives = 157/430 (36%), Gaps = 25/430 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             L+    L ++G  G + W +L P++  V  SG ++   N   ++ P  G++ + QV  
Sbjct: 22  RHLRLGGWLVLLGFGGFLLWGLLAPLDKGVPVSGSVVVAGNRKAVQHPSGGVVSQIQVHE 81

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           G ++  G  LL  + +++    D  +         +  +  E+  L  +     +  +  
Sbjct: 82  GDRVRAGQVLLLMDTVDSRTQRDALRSQHLSNAAQQARLQAERDGLQAIAFPPLLQARRE 141

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E     L+    +  ++        ++++  S+      +  +       + +   +   
Sbjct: 142 EPEVMSLMLLQQQLFTSRRAALQSELAAIAESIAGSQAMLEGVRRILRPAKQRQKAM--- 198

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               Q+ L+ M+N   +     + +            E +  I  Q + +  I  L  ++
Sbjct: 199 ---LQEQLSGMRNWPAQGMWRASAV----------GSEGQHRISTQASRIPDIGRLGRQS 245

Query: 252 NLEFANYLKEISRDLEQNQ---RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            L+  +  +E  +++           +  ++L   E       + +P+AGT+V    F+ 
Sbjct: 246 ELKLRSPAREYQKEVSSQLPRYDEADELDNRLAKAEADLGHTQVKAPVAGTVVGLSVFTE 305

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  Q LM+IVP  +   + A++  + I  V+ G    + F  +      + +  + 
Sbjct: 306 GGVIGAGQQLMEIVPSDRGLQVEARIPVELIDKVQVGLPVELLFSAFNQSTTPRVEGEVT 365

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEII 427
            +       +       YY V  K+++      N +E+R G P E        ++   + 
Sbjct: 366 LVGADRLTDEK--SGAPYYSVRAKVSEEGLQRLNGLEIRPGMPVEGFIRTGERSMMNYLF 423

Query: 428 HPITDNWPKI 437
            P+TD     
Sbjct: 424 KPLTDRLHLA 433


>gi|256827822|ref|YP_003156550.1| HlyD family type I secretion membrane fusion protein
           [Desulfomicrobium baculatum DSM 4028]
 gi|256576998|gb|ACU88134.1| type I secretion membrane fusion protein, HlyD family
           [Desulfomicrobium baculatum DSM 4028]
          Length = 442

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 59/427 (13%), Positives = 159/427 (37%), Gaps = 15/427 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             + R        +++   + +  L+ W+    ++      G+++    V  I++   GI
Sbjct: 19  AAMYRRGHRWAYALSMTICLLLASLLVWTHFAILDEVTRGMGQVIPSQRVQIIQNLEGGI 78

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V     + +G  L+   +       ++ + ++K+        ++A+  L  +   
Sbjct: 79  LVETLVRENQLVEKGDILVRISN-------EMAQSTLKDTASQALEHQAAIARLKAESSG 131

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E  F    E+L     K  S    ++   ++ + + + +  ++         ++  + +
Sbjct: 132 TEPVF---PEELQTKNPKAVSDQLAIYQARMNQLTQEMNILRSQYTQRVQEAQEMAIRRN 188

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L   Q+ + + K L EKN   + +    +R V     +L+          +   E
Sbjct: 189 QAAQDLKLAQEQMNIAKPLMEKNVYPRVEYISLQRTVSSLRGDLQSLNVAIPRTQQAAQE 248

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           + +      A +     +++ Q+Q     ++  L+  +    +  + SP+ GT+      
Sbjct: 249 IKERQAQRMAEFKATALQEMNQHQVELNSKLHALSAGQDRVTRTDVRSPVRGTVKQVILN 308

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +  +P+++I+P      I A + P  I  +  G  A ++   Y        +  
Sbjct: 309 TVGGVVKPGEPILEIIPLDDTLLIEANIKPADIAFLHPGQKAMIKITAYDFSIYGGLEGS 368

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I     +     + + +Y+V L+   +++ +    + +  G  A V       ++  
Sbjct: 369 VEQISGDTIED---QKGESFYKVKLRTQASNIVYRGEKLPIIPGMTASVDILTGKKSVLD 425

Query: 425 EIIHPIT 431
            ++ PI 
Sbjct: 426 YLLKPIL 432


>gi|332994176|gb|AEF04231.1| HlyD family secretion protein [Alteromonas sp. SN2]
          Length = 454

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 74/427 (17%), Positives = 159/427 (37%), Gaps = 15/427 (3%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
            W  + +  PA  KR+     + ++ L+ W+    I+      G+++    +  ++S   
Sbjct: 33  EWARIMQ-TPAKAKRLLYSVGVVLLILLIWAYFAEIDEVAKGEGKVIPSQQLQILQSYDG 91

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI++   V  G Q+ +G  LL  +       ++        L   +      L  L N  
Sbjct: 92  GIVQDILVSEGQQVQKGDVLLRVDPTRYISSLEENTTQFAALAAKVQR----LSALTNNT 147

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +      +    L++   K       +F   ++ +        +R++    +       
Sbjct: 148 SL------AFSPDLINQAPKIVENERNLFESNLAELNEVAAGSDSRIQQRNQDVEQERAN 201

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +++LS  +K+L++ K L    AVS+ ++ + ER + +   ++  +    +  L  I
Sbjct: 202 LYQYKSVLSLTEKELSVTKPLLASGAVSEIEILRLERQIVELEGKIAMSQVAIERGLSTI 261

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E            +   +++L       A      T LE    Q  + SPI GT+    
Sbjct: 262 EEEIISKEESRLKLINRWNQELTDAVGEMATLQQSQTTLEDVVSQAELRSPINGTVQRLL 321

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +          +++++P      + AKV+PK I  ++ G  A ++F  Y         
Sbjct: 322 INTVGGVITPGSAVIELIPQDDQLIVEAKVSPKDIAFIRGGQKAILKFSAYDFTIYGGMD 381

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           A ++ I       + +   + Y+ V L+ T    +D  +++  G   +V       T+  
Sbjct: 382 AEVKHISADAITNEKD---ETYFLVRLE-TKRTIADAPLDIMPGMIVQVDILTGKKTVLN 437

Query: 425 EIIHPIT 431
            I+ P+ 
Sbjct: 438 YILSPLF 444


>gi|254511015|ref|ZP_05123082.1| rb129 [Rhodobacteraceae bacterium KLH11]
 gi|221534726|gb|EEE37714.1| rb129 [Rhodobacteraceae bacterium KLH11]
          Length = 456

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 69/432 (15%), Positives = 163/432 (37%), Gaps = 14/432 (3%)

Query: 15  ASLKRMTLLSIIGIIGLIT----WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           A +K   +L ++ + G +     W+    ++ +V +    + E N   ++    GI++  
Sbjct: 29  AGIKGFVILGVLVVAGFVGGTVYWAASSKLDGAVVAPASFVVEGNRKTVEHLDGGIVRNI 88

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVL 127
            V +G  +  G  L+  +  +    +D+ K  +  L   R  +  +    D    ++D  
Sbjct: 89  LVNDGDVVEAGQTLVELDSTDLDVNLDVIKSQLGELNVRRARLVAQIRGED----RFDRT 144

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           + A   R E           T   +F+  I +      +   ++ ++      L ++   
Sbjct: 145 DVADMIRVEMDSRDWDDAFLTQKLLFDAEIRTRAAERNLLDQQIANLQEQIQGLNSQRQA 204

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
               +   +++L  ++ L  K  V+ N +N +   + +        I ++      I+EL
Sbjct: 205 NARQMDITREELGNLETLQAKGLVAANRVNSRRVEIERLVGVDASLITQEAQARNQISEL 264

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
              +  +     + +S +L Q +   A    +     +  ++  + +P++G +V    F+
Sbjct: 265 KLASIGQENQRAEAVSSELAQVEALLATLEPQYVGAAERLKRVAVTAPVSGRVVGLTVFT 324

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
           +    +  +P++ IVP  +   + AKV    I+ +  G +  VR   +      +   +I
Sbjct: 325 AGGVVRPGEPILDIVPADQPLIVEAKVNTADIEKLYVGQSTRVRLSAFDQGEVPEATGMI 384

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEI 426
             I     + D     + YY   +++          +EL  G PA++       T    +
Sbjct: 385 TDISADSLEDDRT--GEPYYLAQVRLDQAQPEQIAALELVPGMPADLFVNTGERTALSYL 442

Query: 427 IHPITDNWPKIF 438
             P+ +   + F
Sbjct: 443 AQPLKERLARTF 454


>gi|148284165|ref|YP_001248255.1| alkaline protease secretion protein [Orientia tsutsugamushi str.
           Boryong]
 gi|146739604|emb|CAM79372.1| alkaline protease secretion protein [Orientia tsutsugamushi str.
           Boryong]
          Length = 518

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 72/442 (16%), Positives = 153/442 (34%), Gaps = 35/442 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +     +     + II I+    WS L P++ +  + G +++      I+    GI+K+ 
Sbjct: 95  QTARGPILFGVWVMIIFIVVGGLWSALAPLDSAAVAVGTVISSTENKIIQHQEGGIVKEI 154

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVL 127
            V+ G  +  G P++  +D +    +++K    + L   +  +  E    + +     ++
Sbjct: 155 FVKQGDYVKTGNPIIALDDTKIRASVEIKLGQYRTLLANQARLTAELEQQEEIIFSEILV 214

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                    +++           K  N  I    + +                LE K   
Sbjct: 215 NNNHIPEVAKIMSIQQHLFQARKKGLNARIMQFEKRID--------------SLEAKVVA 260

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +  L   +K +   ++L  +    + +L++         +E    +         IN  
Sbjct: 261 SKKQLEYVRKLIKNAESLIAQGFGQKTELDKL-------LVEESSLVGNIIITELEINST 313

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +     +  +     +L++ +    +       L     +  + SP+ G I      +
Sbjct: 314 QQDIERTKSEAIDRTLSELKEVEHAVIEAQESYNSLIDILSRTLVKSPVDGIIKVLDVNT 373

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                   Q + +I P +    I+AK+  K I  VK G  A +RF  +       F   I
Sbjct: 374 KGGVIGSGQRIAEITPSNDSLIIKAKIPQKNIDSVKVGLKAKIRFGAFKYRTTPVFTGRI 433

Query: 368 EKIDPIISQQ-------DNNLQTQEYYEVILKITDLAFSD----NNIELRNGFPAEVLFT 416
             + P   Q        +N +    +Y   ++I    F+       ++L  G  A++   
Sbjct: 434 VLVSPDTVQDQQSAMQFNNAMIGDTFYIAKIEIDMDEFNKVAKVQKLKLFPGMQADIQII 493

Query: 417 AKNTTLAQEIIHPITDNWPKIF 438
               TL + ++ PITDN  + F
Sbjct: 494 TGTRTLLRYLLDPITDNMFRAF 515


>gi|242280318|ref|YP_002992447.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio salexigens DSM 2638]
 gi|242123212|gb|ACS80908.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio salexigens DSM 2638]
          Length = 430

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 74/422 (17%), Positives = 146/422 (34%), Gaps = 20/422 (4%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
             L I+  +  + W+    ++I   + GE++    V  ++    GII K  V  G  + +
Sbjct: 20  LFLCIVMCLAFLGWACYFQLDIVSQAEGEVIPSSRVKPVQHLEGGIIMKINVREGEMVAK 79

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           G  L+  E   +   +D  +V + +LR     +  E   L   +   D+ EK     E  
Sbjct: 80  GQELVVLEATASDSTVDELEVRVTSLRVNIARLSAEDQGLKAPDYPKDIYEKFPALIERS 139

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L            K+F    + V   L  +  +++    +   + ++    R  L   ++
Sbjct: 140 L------------KLFQTRKARVESDLLSEREKIKQREQDIKQITSRQRNSRNSLKLLRE 187

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            + +   L E    S+       +   K    + E+  +       + +   +      +
Sbjct: 188 QIKISAGLLEDGLTSRYKHLGFLKEESKLKSSIEEDSAKLAKARSALAQAKADIGEIRNS 247

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           YL  +  +L++ +R F +   +L   E    +  I SP+ G +      S     +    
Sbjct: 248 YLASVREELQEARREFDELSQRLRKFEDNLNRTIIRSPVDGVVKTLYVVSVGEVVRPGMT 307

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +M IVP      I A++    I +VK G  A V+       R       +  I P     
Sbjct: 308 IMDIVPAGDKLVIEARLPISDIGYVKDGQKAVVKLASSDAARFGNIDGKVVNISPDADST 367

Query: 378 DNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
           D  L    +Y V ++     F  +    +L  G            ++ + I+ P   +  
Sbjct: 368 DRGLT---FYRVRIETDKDFFEHDGNYYKLFPGIRVIAGIHIGTRSVMEYILEPFMGSMS 424

Query: 436 KI 437
             
Sbjct: 425 YA 426


>gi|52841747|ref|YP_095546.1| HlyD family secretion protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|30577827|emb|CAD90958.1| LssD protein [Legionella pneumophila]
 gi|52628858|gb|AAU27599.1| HlyD family secretion protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 378

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 67/421 (15%), Positives = 138/421 (32%), Gaps = 63/421 (14%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +   S++  I  I W+    ++   +  G+++    V  I++   GII+   V+ G  + 
Sbjct: 14  ILWTSLLFFIVAIIWANYAILDEVTTGQGKVIPSSEVQVIQNLEGGIIQNIFVKEGQIVK 73

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +   L+  ++          +  I  L   I    + +                  +   
Sbjct: 74  KDQILMQIDNTRFMASYAEAEKKIDALEIEIIRLNAEIS-----------------DTKP 116

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
            F  K+  T   +    + S+Y S   +L +                 L+  L   QK+L
Sbjct: 117 VFPDKFIKTYPHLVQDQL-SLYESRMRELNQ-----------------LKKSLELAQKEL 158

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + + L +  +VS+ ++ + ER V                          E       + 
Sbjct: 159 DLTRPLLKGGSVSEVEVIRLERSVS-------------------------EIKGNIEKFK 193

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E    L + +      +      +    + T+ SP+ G +   ++ +     Q    L+
Sbjct: 194 SEELDKLNKARTELFALIEANKADKDRLTRTTVRSPVYGIVKQIKTTTIGGVVQPGSDLL 253

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-SQQD 378
           +IVP      I AK+ P  I  +  G  A V+   Y        + ++E I       + 
Sbjct: 254 EIVPLDDTLLIEAKIRPSDIGFIHPGQKAMVKITAYDFSIYGGLEGVVEHISADTIIDEK 313

Query: 379 NNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
            + + + YY V ++     L      + +  G  A V       ++ Q ++ PI      
Sbjct: 314 TDKKEESYYIVKVRTDKNYLGTEKKPLPIIPGMQATVDILTGQKSVLQYLLKPIIKAKQS 373

Query: 437 I 437
            
Sbjct: 374 A 374


>gi|218886260|ref|YP_002435581.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757214|gb|ACL08113.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 466

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 65/427 (15%), Positives = 150/427 (35%), Gaps = 22/427 (5%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           ++ HP +      L    ++  I W+    ++       +++    + EI++   GII +
Sbjct: 47  RKGHPLAFLLSASLGAFLLV-FIVWAAFASLDEVTRGQAQVIPSQRIQEIQNLEGGIISE 105

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
             V  G  + +GT L+  ++            K          ++ E +  D      +V
Sbjct: 106 IFVREGQIVEKGTVLVRLDNESAASFFRDAVSKSYEHMAAIARLEGEMAGKD-PVYPPEV 164

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           ++KA             +  +  + + N     +   L +  +++        ++  +  
Sbjct: 165 VQKA------------PQVVADQTSIHNARKRQLELELSVLESQLSQKRQEVDEMVGRQG 212

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L A L   Q+   + + L EK   S+ D    E+ V +   ++             ++E
Sbjct: 213 QLGASLRVAQEQRDIARPLVEKQIYSKVDYLSLEQRVIQLRGDISSLAVNIPKARSAVHE 272

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +    +   A    +   ++ + +         L+  E    +  + +P+ GT+      
Sbjct: 273 VEQRLSHRKAEVRSQAVEEINKRRVELNSLRETLSAGEDRVTRTDLRAPVRGTVKRIIIN 332

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +  + ++++VP      + A++ P  I  +  G  A V+   Y        +A 
Sbjct: 333 TQGGVVKPGESILELVPLDDTLLVEARIRPADIAFLHPGQKAIVKVTAYDFSIYGGLEAG 392

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I     +     + + YY V L+    A      N+ +  G  A V       T+  
Sbjct: 393 LEQISADTIED---RKGEFYYLVKLRTKKNAITYRGENLPIMPGMTATVDILTGKKTVLD 449

Query: 425 EIIHPIT 431
            ++ PI 
Sbjct: 450 YLLKPIL 456


>gi|54294440|ref|YP_126855.1| secretion system protein D [Legionella pneumophila str. Lens]
 gi|53754272|emb|CAH15749.1| Legionella secretion system protein D [Legionella pneumophila str.
           Lens]
          Length = 378

 Score =  295 bits (756), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 68/421 (16%), Positives = 137/421 (32%), Gaps = 63/421 (14%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +   S++  I  I W+    ++   +  G+++    V  I++   GII+   V+ G  + 
Sbjct: 14  ILWASLLFFISAIIWANYAILDEVTTGQGKVIPSSEVQVIQNLEGGIIQNIFVKEGQIVK 73

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +   L+  ++          +  I  L   I    + +   N K    EK  ++    + 
Sbjct: 74  KDQILMQIDNTRFMSSYAEAEKKIDALEIEIIRLNAEIS--NTKPVFPEKLTKTYPHLVQ 131

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L  Y S   ++                                 + L   L   QK+L
Sbjct: 132 DQLSLYESRMREL---------------------------------NQLEKSLELAQKEL 158

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + + L +  +VS+ ++ + ER V                          E       + 
Sbjct: 159 NLTRPLLKGGSVSEVEVIRLERTVS-------------------------EIRGNIEKFK 193

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E    L + +      +      +    + T+ SP+ G +   ++ +     Q    L+
Sbjct: 194 SEELDRLNKARSELFALIEANKADKDRLTRTTVRSPVYGIVKQIKTKTIGGVVQPGNDLL 253

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-SQQD 378
           +IVP      I AK+ P  I  +  G  A V+   Y        + ++E I       + 
Sbjct: 254 EIVPLDDTLLIEAKIRPSDIGFIHPGQKAMVKITAYDFSIYGGLEGVVEHISADTIIDEK 313

Query: 379 NNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
            + + + YY V ++     L      + +  G  A V       ++ Q ++ PI      
Sbjct: 314 TDKKEESYYIVKVRTEKNYLGTEKKPLPIIPGMQATVDILTGQKSVLQYLLKPIIKAKQS 373

Query: 437 I 437
            
Sbjct: 374 A 374


>gi|254515318|ref|ZP_05127379.1| HlyD family secretion protein [gamma proteobacterium NOR5-3]
 gi|219677561|gb|EED33926.1| HlyD family secretion protein [gamma proteobacterium NOR5-3]
          Length = 447

 Score =  295 bits (756), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 65/436 (14%), Positives = 153/436 (35%), Gaps = 14/436 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
                +      P   + M     + ++ LI W+    ++      G+++    V  + S
Sbjct: 22  SDLADRAAIEQEPLRARGMLYGIALVVVLLIVWATFAEVDTVTRGQGKVIPSQQVQVVGS 81

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G+I++  +  G  +  G  LL  +   +   +   +V ++ L       ++ +D   
Sbjct: 82  QDGGVIREILIREGDTVKAGDLLLRLDQTRSQATLGENRVELQGLTIKAARLRAMVDNAE 141

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                      +   Q+L  L        ++    ++++     +   ++        +L
Sbjct: 142 F----------APTPQMLTALPDVADQERELHESSVTALRVEQDIARQQLEQRSEELSEL 191

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + + S L       Q++LT+ + +    AVSQ ++ + +R V ++  EL +   + K + 
Sbjct: 192 KARESQLATEQRLAQQELTVTEPMVASGAVSQVEILRLQREVNRAGGELAQTQAQIKRVS 251

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I E     N     +  E    L                L     Q  + +P++GTI 
Sbjct: 252 AAIAEAQGRVNAVQLEFSNEAREQLTDTLTRINALTEAAAGLSDRVSQTNLTAPVSGTIN 311

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +        + +++++P      +  +V P+ I  +  G  A V+   Y  +   
Sbjct: 312 QLYFNTVGGVVLPGRDIVELIPADDTLLLEVRVRPQDIAFIAAGQRANVKVTAYDFVVYG 371

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             +  +E+I       +       +YEV+++     F  ++  +  G   EV       T
Sbjct: 372 GLEGRVEQIAADTVLDEE---GNAFYEVLVRTEQSDFGPDS-PIIPGMTVEVDVITGKKT 427

Query: 422 LAQEIIHPITDNWPKI 437
           +   ++ P+     + 
Sbjct: 428 VLAYLMKPVLRAHQRA 443


>gi|126728480|ref|ZP_01744296.1| type I secretion membrane fusion protein, HlyD family [Sagittula
           stellata E-37]
 gi|126711445|gb|EBA10495.1| type I secretion membrane fusion protein, HlyD family [Sagittula
           stellata E-37]
          Length = 506

 Score =  295 bits (755), Expect = 9e-78,   Method: Composition-based stats.
 Identities = 71/431 (16%), Positives = 159/431 (36%), Gaps = 9/431 (2%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
                +    L   + + G   WS    I  ++ +SG+I  + N   ++ P  G++ +  
Sbjct: 80  PTRGPMTVGLLAVALLVGGFGYWSATTNISGAIVASGQIQVDQNRQVVQHPDGGVVARIA 139

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLE 128
           V+ G ++ +G  LL  +       +++ +  +  L   R  +  E+   + +  + +VL 
Sbjct: 140 VDEGDEVAEGDLLLQLDPTLLLSELNIVEGQLYELTARRARLIAERDGAEEIVFEEEVLA 199

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            A  +      + + +       +F     S+ R ++    R   I      +E + + L
Sbjct: 200 AARNN------EDVAELVEGQRNLFFARAESLNREVEQLRKRSEQIADQVRGIEAQQAAL 253

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L   +K+L   + L ++     + +   +R   + +  + E +  +      I E  
Sbjct: 254 TTQLELIEKELRDQQTLLDRGLAQASRVLSLQREQARLSGTVGELVASKAQAEGRITETE 313

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +         +E    L   Q    +   +   L +   +  I +P++G I     F+ 
Sbjct: 314 IQILGLETRRREESITTLRDLQFRERELAEQRRSLRERLSRLDIRAPVSGVIYGLTVFTP 373

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +  + ++P+M +VP  +   I A+V P  I  +       +RF      R  +    + 
Sbjct: 374 RSVIRPAEPVMYLVPQDRPLVIAAQVEPIHIDRLFVDQEVALRFSALDQRRTPELFGEVT 433

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           +I     + + +       E++L   ++A       L  G P E     ++ T    ++ 
Sbjct: 434 QISADAFEDEASRVRYYRAEIVLNEGEIARLPEGTVLIPGMPVEAFIRTEDRTPLAYLVK 493

Query: 429 PITDNWPKIFE 439
           P  D + K F 
Sbjct: 494 PFMDYFSKAFR 504


>gi|54297429|ref|YP_123798.1| secretion system protein D [Legionella pneumophila str. Paris]
 gi|53751214|emb|CAH12625.1| Legionella secretion system protein D [Legionella pneumophila str.
           Paris]
          Length = 378

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 67/421 (15%), Positives = 138/421 (32%), Gaps = 63/421 (14%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +   S++  I  I W+    ++   +  G+++    V  I++   GII+   V+ G  + 
Sbjct: 14  ILWTSLLFFIVAIIWANYAILDEVTTGQGKVIPSSEVQVIQNLEGGIIQNIFVKEGQIVK 73

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +   L+  ++          +  I  L   I    + +                  +   
Sbjct: 74  KDQILMQIDNTRFMASYAEAEKKIDALEIEIIRLNAEIS-----------------DTKP 116

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
            F  K+  T   +    + S+Y S   +L +                 L+  L   QK+L
Sbjct: 117 VFPDKFIKTYPHLVQDQL-SLYESRMRELNQ-----------------LKKSLELAQKEL 158

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + + L +  +VS+ ++ + ER V                          E       + 
Sbjct: 159 DLTRPLLKGGSVSEVEVIRLERSVS-------------------------EIKGNIEKFK 193

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E    L + +      +      +    + T+ SP+ G +   ++ +     Q    L+
Sbjct: 194 SEELDKLNKARTELFALVEANKADKDRLTRTTVRSPVYGIVKQIKTTTIGGVVQPGSDLL 253

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-SQQD 378
           +IVP      I AK+ P  I  +  G  A V+   Y        + ++E I       + 
Sbjct: 254 EIVPLDDTLLIEAKIRPSDIGFIHPGQKAMVKITAYDFSIYGGLEGVVEHISADTIIDEK 313

Query: 379 NNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
            + + + YY V ++     L      + +  G  A V       ++ Q ++ PI      
Sbjct: 314 TDKKEESYYIVKVRTEKNYLGTEKKPLPIIPGMQATVDILTGQKSVLQYLLKPILKAKQS 373

Query: 437 I 437
            
Sbjct: 374 A 374


>gi|115523035|ref|YP_779946.1| HlyD family type I secretion membrane fusion protein
           [Rhodopseudomonas palustris BisA53]
 gi|115516982|gb|ABJ04966.1| type I secretion membrane fusion protein, HlyD family
           [Rhodopseudomonas palustris BisA53]
          Length = 452

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 78/421 (18%), Positives = 154/421 (36%), Gaps = 15/421 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L ++ +IG   WS L  +E +V + G +  + N+ E++    GI+K   V  G  + QG 
Sbjct: 41  LVVLLVIGCGGWSALAMLEGAVIAQGAVKVDQNLKEVQHRDGGIVKTLAVRQGDFVQQGQ 100

Query: 83  PLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            L T +D++    + + +  +      R  +  E+  L  +    D+           L 
Sbjct: 101 VLATLDDVQIKAELLIVRSQLGEAIGRRARLIAERDNLAEIEFPEDL---------ATLS 151

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                  +   ++F     +     +     +         +E + +     +     + 
Sbjct: 152 SSASTVITGEQRLFTGNKLTRDSQKEQLELSISQTGEEINGMEARHAAKEQEIKLVSAER 211

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             ++ LFE+  V    +   +R   +   E  E            +E+  +      N  
Sbjct: 212 EKLEGLFERKIVEYTRVYSVQRDWARILGERGEIAASIARAKVRTSEIRLQIIAVDQNAS 271

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E  RDL       ++   +   +E    +  I +PI G +    +F+       +  + 
Sbjct: 272 TEAQRDLRTVDARISELSERKVAIEDRLSRSEIRAPITGYVNELFAFTVGGVITPAARIA 331

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IVP +    +  K+ P  I  V+ G  A V    +      + +A + ++ P  S+   
Sbjct: 332 TIVPENAQLKVEVKIAPVDIDQVRVGQRARVHLTSFNRATTPELQAAVAQVSPASSRDQ- 390

Query: 380 NLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               QEYY   +++ D A +    + L  G PAEV  + +  T A  ++ P TD   + F
Sbjct: 391 -ASGQEYYVAYVQLADTATAQIEGLRLVPGMPAEVFISTQERTAASYLLKPFTDQMNRAF 449

Query: 439 E 439
            
Sbjct: 450 R 450


>gi|91223834|ref|ZP_01259098.1| putative RTX transport protein [Vibrio alginolyticus 12G01]
 gi|269966434|ref|ZP_06180518.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91191326|gb|EAS77591.1| putative RTX transport protein [Vibrio alginolyticus 12G01]
 gi|269828891|gb|EEZ83141.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 436

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 77/435 (17%), Positives = 156/435 (35%), Gaps = 13/435 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M    W N   +     + +  LS   ++ +I W+    ++  V   G+++   +V  I+
Sbjct: 1   MSTVRWSNA--HLANRSRTLIWLSAALVLSVIIWASWARLDEVVVGEGKVVPTLSVQTIQ 58

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI+K+  V  G  + +G  +   +D             +++L       +  L+ +
Sbjct: 59  SLEGGILKELLVMPGESVTKGQTIAILDDTRFKSTYSETSEQVESLLARKQRLQIELETV 118

Query: 121 N-NKYDVLEKAFESREEQLLDFLGKYHST---CSKVFNYGISSVYRSLKMKLTRMRSIYL 176
             N   +  K   S E Q  D     HS        +   +S +   L+    R+     
Sbjct: 119 KVNSLQLDWKQQVSIEPQPFDISMTGHSAYLNAKANYLERLSQLESELEEAKLRIEQQSQ 178

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
             LD  N    L++ L    K+  M++ +    AV++ +L +  R V K   ++  +   
Sbjct: 179 AYLDTLNTIQTLKSSLVIVSKERDMLREVVSSGAVAEVELLKLNRDVIKLKGDIASSQAA 238

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +      +E   +       +  E    L +     A        +     +  +LSP+
Sbjct: 239 AQKQRAVYSESIADYRGTALAFRAEAQGQLNEVVTQLAQLNESRQAIADQLNRTQLLSPV 298

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GTI      +     +  +P+++IVP +    + A+++P+ I  ++ G  ATV+   Y 
Sbjct: 299 DGTIKDVFVRTIGGVVKPGEPILEIVPRNSTLIVEARISPQNIAFIRPGLPATVKLSAYD 358

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +     +  +  +     Q   N +   YY   +        D+   +  G    V   
Sbjct: 359 FVIYGGLEGEVTYVSADALQ---NEEGNAYYRANVTF----KVDDKFTIIPGMQVVVDIL 411

Query: 417 AKNTTLAQEIIHPIT 431
               T+    + PI 
Sbjct: 412 TGEKTVLNYWLKPIL 426


>gi|83951080|ref|ZP_00959813.1| type I secretion membrane fusion protein, HlyD family protein
           [Roseovarius nubinhibens ISM]
 gi|83838979|gb|EAP78275.1| type I secretion membrane fusion protein, HlyD family protein
           [Roseovarius nubinhibens ISM]
          Length = 412

 Score =  295 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 67/419 (15%), Positives = 156/419 (37%), Gaps = 13/419 (3%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           + + G  +W++L  I  +V ++G+I  + N   ++ P  G++ +  V+ G+ +  G  L+
Sbjct: 1   MLLGGFGSWAVLTNIAGAVIANGQIEVDQNRQVVQHPDGGVVAEILVDEGTAVEVGDVLI 60

Query: 86  TFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
             +  + T  + + +  +      R  ++ E+     +     +L  A  +   Q +   
Sbjct: 61  RLDATQLTSQLTITENQLAEFMARRGRLEAERDGRSEITFDPMLLSVATRANSAQAM--- 117

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                   ++      ++ +  +    R +        +  +   L   +    ++LT  
Sbjct: 118 ---MDGQIRLHAARAETIAQESEQLEKRRQQTQDQIGGIVAQRRALARQIELIGEELTAQ 174

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           ++LF+K     + +   +R   + +  L E    +      I E+  E     +   +E 
Sbjct: 175 QSLFDKGLAQSSRILALQREEARLSGTLGELDASKAQAEGRITEINIELLRLTSARREEA 234

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              L   Q    +   +   L +   +  IL+P+ G +     F+  +  + + P++ IV
Sbjct: 235 ITTLRDLQFRELEMHEQRLALSEQLSRLDILAPVPGIVHGLTVFAPRSVLRPADPVLFIV 294

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P  +   I A+V P     V  G   ++RF         +    + +I     + +    
Sbjct: 295 PQDRPLVIAAQVDPLHRDQVFVGQEVSLRFSALDQRETPELFGQVAQISADAFEDEATRL 354

Query: 383 TQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
              YY   + ++D   +    +++L  G P E      + T    +  P+ D + K F 
Sbjct: 355 A--YYRAEITLSDEERARLPEDVKLVPGMPVEAFIRTSDRTPIYYLTKPLVDYFTKAFR 411


>gi|148359050|ref|YP_001250257.1| HlyD family transporter secretion protein [Legionella pneumophila
           str. Corby]
 gi|296107099|ref|YP_003618799.1| HlyD family secretion protein [Legionella pneumophila 2300/99
           Alcoy]
 gi|30577818|emb|CAD90950.1| LssD protein [Legionella pneumophila str. Corby]
 gi|148280823|gb|ABQ54911.1| HlyD family secretion protein [Legionella pneumophila str. Corby]
 gi|295649000|gb|ADG24847.1| HlyD family secretion protein [Legionella pneumophila 2300/99
           Alcoy]
          Length = 378

 Score =  295 bits (754), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 66/421 (15%), Positives = 138/421 (32%), Gaps = 63/421 (14%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +   S++  I  I W+    ++   +  G+++    V  I++   GII+   V+ G  + 
Sbjct: 14  ILWTSLLFFIVAIIWANYAILDEVTTGQGKVIPSSEVQVIQNLEGGIIQNIFVKEGQIVK 73

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +   L+  ++          +  I  L   I    + +   + K    +K  ++    + 
Sbjct: 74  KDQILMQIDNTRFMASYAEAEKKIDALEIEIIRLNAEIS--DTKPVFPDKFIKAYPHLVQ 131

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L  Y S   ++                                 + L+  L   QK+L
Sbjct: 132 DQLSLYESRMREL---------------------------------NQLKKSLELAQKEL 158

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + + L +  +VS+ ++ + ER V                          E       + 
Sbjct: 159 DLTRPLLKGGSVSEVEVIRLERSVS-------------------------EIKGNIEKFK 193

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E    L + +      +      +    + T+ SP+ G +   ++ +     Q    L+
Sbjct: 194 SEELDKLNKARTELFALVEANKADKDRLTRTTVRSPVYGIVKQIKTTTIGGVVQPGSDLL 253

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-SQQD 378
           +IVP      I AK+ P  I  +  G  A V+   Y        + ++E I       + 
Sbjct: 254 EIVPLDDTLLIEAKIRPSDIGFIHPGQKAMVKITAYDFSIYGGLEGVVEHISADTIIDEK 313

Query: 379 NNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
            + + + YY V ++     L      + +  G  A V       ++ Q ++ PI      
Sbjct: 314 TDKKEESYYIVKVRTEKNYLGTEKKPLPIIPGMQATVDILTGQKSVLQYLLKPIIKAKQS 373

Query: 437 I 437
            
Sbjct: 374 A 374


>gi|307610216|emb|CBW99774.1| Legionella secretion system protein D [Legionella pneumophila 130b]
          Length = 378

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 67/421 (15%), Positives = 138/421 (32%), Gaps = 63/421 (14%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +   S++  I  I W+    ++   +  G+++    V  I++   GII+   V+ G  + 
Sbjct: 14  ILWTSLLFFIVAIIWANYAILDEVTTGQGKVIPSSEVQVIQNLEGGIIQNIFVKEGQIVK 73

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +   L+  ++          +  I  L   I    + +                  +   
Sbjct: 74  KDQILMQIDNTRFMASYAEAEKKIDALEIEIIRLNAEIS-----------------DTKP 116

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
            F  K+  T   +    + S+Y S   +L +                 L+  L   QK+L
Sbjct: 117 VFPDKFIKTYPHLVQDQL-SLYESRMRELNQ-----------------LKKSLELAQKEL 158

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + + L +  +VS+ ++ + ER V                          E       + 
Sbjct: 159 DLTRPLLKGGSVSEVEVIRLERSVS-------------------------EIKGNIEKFK 193

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E    L + +      +      +    + T+ SP+ G +   ++ +     Q    L+
Sbjct: 194 SEELDKLNKARTELFALVEANKADKDRLTRTTVRSPVYGIVKQIKTTTIGGVVQPGSDLL 253

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-SQQD 378
           +IVP      I AK+ P  I  +  G  A V+   Y        + ++E I       + 
Sbjct: 254 EIVPLDDTLLIEAKIRPSDIGFIHPGQKAMVKITAYDFSIYGGLEGVVEHISADTIIDEK 313

Query: 379 NNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
            + + + YY V ++     L      + +  G  A V       ++ Q ++ PI      
Sbjct: 314 TDKKEESYYIVKVRTEKNYLGTEKKPLPIIPGMQATVDILTGQKSVLQYLLKPIIKAKQS 373

Query: 437 I 437
            
Sbjct: 374 A 374


>gi|326388175|ref|ZP_08209778.1| Type I secretion membrane fusion protein, HlyD [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207341|gb|EGD58155.1| Type I secretion membrane fusion protein, HlyD [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 449

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 81/412 (19%), Positives = 158/412 (38%), Gaps = 13/412 (3%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           L   +I +PI  +V   G++  E  V  I  P  G+IK+  V NG  + +G  LL F+D 
Sbjct: 46  LFVLAIAVPIGGAVIGGGQVSVETRVKRIAHPTGGVIKQILVTNGQHVTEGQLLLRFDDR 105

Query: 91  ETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            T        ++++ L   +  ++ E+     ++   ++      +  + + D       
Sbjct: 106 VTGADERFSSLTVEQLLAQKARLEAERLGQSRIDFPTELTGANTPTARKAMEDEQH---- 161

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +F    +           R+         LE + + LR      + +    + L++
Sbjct: 162 ----LFTMRQTEEADMKSQMSARVAQYNEEIRGLEAQIAALRQQRKLIEPERQSARELWD 217

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           K  V+ + LNQ ER        L     +       I E   ++         E   DL 
Sbjct: 218 KQLVTISRLNQLERTAVDMDGSLGSLQAQIAQARAKITEAQAQSIQLTQTRRVEAGNDLN 277

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q   T   +  +      ++ +  + +P +GTI      +  +  + ++P+M+IVP    
Sbjct: 278 QINSTLNQQQLRSVSATDSQVRSDVRAPYSGTIEKIAFVAIGDVVRPAEPIMEIVPDRDT 337

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + A ++P  I  V KG    +RF  +      +    +  +     + +N    Q YY
Sbjct: 338 MVVEAMISPTDIDQVAKGQVTRIRFSSFNRAATPEIPGKVIYVA--TDRTENPESKQAYY 395

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V ++I        +++LR+G PAEV     + +L   +  P+ D + + F 
Sbjct: 396 TVRVEIDQAMLRREHLDLRSGMPAEVYIETGSRSLMSYLTKPLRDQFVRAFR 447


>gi|110633151|ref|YP_673359.1| HlyD family type I secretion membrane fusion protein [Mesorhizobium
           sp. BNC1]
 gi|110284135|gb|ABG62194.1| type I secretion membrane fusion protein, HlyD family
           [Chelativorans sp. BNC1]
          Length = 433

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 70/405 (17%), Positives = 147/405 (36%), Gaps = 15/405 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +  +V + G +  +  +  I+    GI+ +  V  G  +  G  LL  ED +T   + +
Sbjct: 38  QLSGAVIAQGSVAVDQRLKAIQHRDGGIVSEINVREGDLVRAGQVLLQLEDAQTKAELSI 97

Query: 99  KKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            +  +  L   R  +  E+  L  +    ++     E+             S  +++F+ 
Sbjct: 98  VQSQLLELAARRARLIAERDDLKEIEFPPELQLPGEET---------ASIVSGETRIFDG 148

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
              +           +  I      LE + +   A +   +++   +K+L +K  + +N 
Sbjct: 149 NRLNRQSQKSQLTLGIEQIGEEIKGLEAQRTAKSAEIVLVEEEYAKIKSLADKKLIERNR 208

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           +   +R   +   E  E            +E+  +      N   E  R+L   +   ++
Sbjct: 209 IYTSDRERTRLRGERGEVDAAIARAKTRASEIRLQIIAIDENARTEAQRELTAVETKISE 268

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +   +     +  I +PI G +      +       ++ L+ IVPH+    I  K+ 
Sbjct: 269 LKDRHMAIADRLSRTDIRAPITGIVNELNIHTIGGVITPAEVLVTIVPHNAKLNIEFKLN 328

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           P  I  V  G  A +RFP +      + K  +  + P  +   + +  + YY   + ++ 
Sbjct: 329 PASIDQVDVGRPARLRFPAFNQRVTPELKGEVTHVSPATA--IDPVSGEVYYAGKISVSP 386

Query: 396 LAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
              +      L  G P EV    +  T    ++ P+TD + K F 
Sbjct: 387 EELAKLGESALLPGMPVEVYVMTQERTALSYLVKPVTDQFNKAFR 431


>gi|220914857|ref|YP_002490165.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium nodulans ORS 2060]
 gi|219952608|gb|ACL62998.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium nodulans ORS 2060]
          Length = 460

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 70/420 (16%), Positives = 172/420 (40%), Gaps = 13/420 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           + +     + +W+ ++ ++ +V S G I+ E +   ++    G+I +  V++G  + +G 
Sbjct: 47  VILATFGVMGSWAAVVRLDRAVISPGVIVAESSRKIVQHFEGGMILEVLVKDGQSVQEGD 106

Query: 83  PLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            LL  + +++    DL +  +     L   +  E++    L    +++ +  E       
Sbjct: 107 VLLRIDPLQSRASADLFRTQLDAALILEARLRAEQNQASELELPPELIARRNEP------ 160

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             + +     +        S+   L +   R++ +    + L  + + ++A +    ++L
Sbjct: 161 -AIARMIKDQTIQLAERQRSLKSQLDLIDARVKQLKTEMVGLAVEKASVQAQVGFINQEL 219

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +++L EK+ +  + L   ER   +    +  ++ E       I E   +         
Sbjct: 220 EGLRSLREKSLIPLSRLLVMERERTRLEGVIGRSVAETAKAQNAIGEAGMQITQLKQKMQ 279

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +  +  L + ++  A+   KL + +    +  I +  +G +   + ++     +  +PLM
Sbjct: 280 EVTTAQLLETRQKIAELREKLLVAQDVLRRHEIRASHSGVVQGLKVYTIGQVVRSGEPLM 339

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +IVP S    I  + +P  ++ +  G  A V+FP +   R       ++ +     +  +
Sbjct: 340 EIVPTSDRLVISVQFSPNDLEAIHAGMRAEVKFPTFQTRRTPAIFGTLKTVSRD--RLID 397

Query: 380 NLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           +   Q Y+  I++I +    ++    L  G PAEV+ +A   T    ++ P+ D     F
Sbjct: 398 DTTKQAYFSGIVEIDEHQVPNDIKHRLLAGLPAEVVVSAGERTALDYMVAPLFDAMGHAF 457


>gi|258404698|ref|YP_003197440.1| type I secretion membrane fusion protein, HlyD family
           [Desulfohalobium retbaense DSM 5692]
 gi|257796925|gb|ACV67862.1| type I secretion membrane fusion protein, HlyD family
           [Desulfohalobium retbaense DSM 5692]
          Length = 447

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 65/431 (15%), Positives = 151/431 (35%), Gaps = 15/431 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H     + R    S   ++   I+ I  LI W+    ++      G++++      I++ 
Sbjct: 20  HVGDAAIHRKGYRSAYVLSAAIILCICALIAWAHFAILDEVTRGVGKVVSSRRTQVIQNL 79

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GII+   V+    + +G  L+   ++     +          R  I   ++ +     
Sbjct: 80  EGGIIEDILVDENQLVDEGDVLVRLSNVTAVSQVQDAYHQSLQHRAAIARLQAEVQGKEP 139

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           ++           E+LL            ++      + + +++  ++         +++
Sbjct: 140 EFS----------EELLREAPDIVEDQRAIYEARKRQLEQEVRVLRSQYTQKLQEVAEMK 189

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           ++   + A L+   +   + + L +K    + +  Q ER +      L            
Sbjct: 190 SRKKQMEANLAVALEQRDIAEPLVKKQIYPRVEFLQLEREIISLRGNLETLELSIPRANN 249

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              E+ +      A +      ++ + +  F      LT  E   ++  + SP+ GTI  
Sbjct: 250 AAIEVRERLEQRRAEFEAAALEEMNRQRVQFNSLQELLTAGEDRVQRTDVRSPVRGTIKQ 309

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +     Q  +P+M+IVP      + A + P  I  +  G  A ++   Y       
Sbjct: 310 LLVNTIGGVIQPGEPIMEIVPVDDTLLVEASIRPADIAFIHPGQKAMIKVSAYDFSIYGG 369

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVIL--KITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++E+I         N + + +Y+V L  +   L +  N + +  G  A V       
Sbjct: 370 LEGVVEQISADTLS---NEEGESFYKVKLRTRTNALTYRGNTLPIIPGMTATVDVLTGKK 426

Query: 421 TLAQEIIHPIT 431
           ++   ++ PI 
Sbjct: 427 SVLDYLLKPIF 437


>gi|209808897|ref|YP_002264435.1| putative type I secretion protein, HlyD family [Aliivibrio
           salmonicida LFI1238]
 gi|208010459|emb|CAQ80818.1| putative type I secretion protein, HlyD family [Aliivibrio
           salmonicida LFI1238]
          Length = 429

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 74/418 (17%), Positives = 155/418 (37%), Gaps = 7/418 (1%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
             ++ I G + W+    +  +  ++G ++ E    +I+    G +K   V  G  + +G 
Sbjct: 16  FILLTIGGFVWWATTAQLSSASIANGSLIVESQRKKIQHLQGGWVKAIHVTEGQHVEKGD 75

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L+   + +         +   +L+  I+  ++ L   N      E   E+    +++ L
Sbjct: 76  LLIELANTKADSDYYRLMLRSISLKATIERLQAELSDNNIVSWTEEYHDEANSADVMNIL 135

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                  +  F   +                +       +++   ++  L    K++ MM
Sbjct: 136 N----NQTLQFQQFLLRNELRTNQYTQNKEQLTEQIRGSKSQLKSIKRQLQLVSKEINMM 191

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           K L +K  VSQ  + + +R       +  E   +     R +  L  +   +     + +
Sbjct: 192 KGLVKKGYVSQTKMFEIQRHQASIESQREELQTKINVSTRQLTSLKQDFEAKDIELKQSL 251

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           S    Q ++ + D    L      R +  + S   GTIV     S          +M+IV
Sbjct: 252 SSQSNQLEKEWLDTNQALITALDVRSRIKVRSEHTGTIVGLNIHSIGGVVNPGDIIMEIV 311

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P+++   ++A + P+ I  V+ G TA VR   Y   +       +  +      +    +
Sbjct: 312 PNNEQLIVQAIIKPEDIDVVRTGQTAKVRLNAYNVRKTPPITGTVIYVAADRLNKKGEKE 371

Query: 383 TQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +   Y V +++     +   N+EL  G P +VL   +N TL      P+ +++ K F 
Sbjct: 372 SG--YLVKVQLLQEEITKLTNVELYPGMPTDVLILLENRTLWDYFTAPLFNSYYKAFR 427


>gi|104782924|ref|YP_609422.1| type I secretion membrane fusion protein, HlyD [Pseudomonas
           entomophila L48]
 gi|95111911|emb|CAK16635.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           entomophila L48]
          Length = 451

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 64/423 (15%), Positives = 152/423 (35%), Gaps = 15/423 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           ++ P+  +    L+   ++  + W+    ++      G+ +    V  I++   GI+ + 
Sbjct: 32  QDSPSLSRLTVWLTATLLLVALAWANFAVLDEVTVGEGKAIPSSKVQVIQNLEGGIVTEI 91

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G  + +G  LL  +D          +     L   ++   +  +        L   
Sbjct: 92  FVREGQMVDKGATLLRLDDTRFKSNKGESEADRYALTAQVERLSAESEGRPF---ALSDE 148

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             ++  Q+ +     + +  +       ++   L       R       +  +K    R+
Sbjct: 149 VRAKAPQVAEDEAALYDSRQRRLASEKQTLNEQL-------RQKTQELAEFRSKVDQYRS 201

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L   Q++L M   L  K A+S  ++ + ++   ++  +L             + E+  +
Sbjct: 202 ALGLLQQELDMSSPLVGKGAISPVEILRLKQRTVEARGQLNATSLAIPRAEAAVAEIRSK 261

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                A +  + +++L   +   +   +    ++    + T++SP+ G +   +  +   
Sbjct: 262 IQEADAGFRSDAAKELNDKRTELSKITATSIAIDDRVNRTTVVSPVRGIVKLLKVNTIGG 321

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q    L++IVP      I AKV P+ +  +  G TA V+F  Y        KA +E I
Sbjct: 322 VVQPGSDLVEIVPIEDNLLIEAKVRPQDVAFLHPGQTAMVKFSAYDYTIYGGLKAKLELI 381

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIH 428
                  D   +   +Y + ++        +N  + +  G  A V       ++   ++ 
Sbjct: 382 GADTVTDD---KGNAFYLIQVRTEKNHLGGDNKPLLIIPGMVATVDIITGQKSVLDYLLK 438

Query: 429 PIT 431
           P+ 
Sbjct: 439 PVL 441


>gi|86137164|ref|ZP_01055742.1| type I secretion membrane fusion protein, HlyD family protein
           [Roseobacter sp. MED193]
 gi|85826488|gb|EAQ46685.1| type I secretion membrane fusion protein, HlyD family protein
           [Roseobacter sp. MED193]
          Length = 434

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 62/411 (15%), Positives = 147/411 (35%), Gaps = 13/411 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+++  I  ++ +SG I  + N   ++    GI+ +  V+ G  + +G  LL  +  E  
Sbjct: 30  WAVMSSIAGAIVASGRIEVDRNRQIVQHLDGGIVAEILVDEGDSVARGDVLLRLDAKELR 89

Query: 94  DLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + + +  +      R  ++ E+ +   +  + ++L  A       +   +        
Sbjct: 90  SQLAITEGQLFEMMARRGRLEAERDSAKAVEFEEELLALAM------IRPAVADLVEGQR 143

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++F     S+ R ++    R          ++ + + +   L    ++L     L E+  
Sbjct: 144 RLFVAREESIAREIEQLNKRSAQTKDQIKGIKAQQASMELQLGLIAEELKNQTILLERGL 203

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +    R     +  L E +  +   L  I E   E     +   +E    L   +
Sbjct: 204 AQAGTVLNLRRTEADLSGRLGELVATEAQALGRITETEIEILKLGSTRREEAITQLRDLR 263

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +       L +  ++  I +P++G +   Q  +  +  + + P++ +VP  +   I
Sbjct: 264 YQELELGENRRTLLERLDRLDIAAPVSGIVYDLQVHTPRSVIRAADPVLYLVPQDRPLVI 323

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A+V+P  I+ +  G   T++F              +  +     +  N      YY   
Sbjct: 324 AAQVSPTDIEQIYVGQDVTLKFSSLDQRNTPDLFGKVMLVSADAFEDQNT--GISYYRAE 381

Query: 391 LKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +++   +         L  G P E     ++ +    ++ P+ D + K F 
Sbjct: 382 IELNADEAQRLPKGTVLIPGMPVESYIRTQDRSPLSYLVKPLADYFVKAFR 432


>gi|254473618|ref|ZP_05087014.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
 gi|211957330|gb|EEA92534.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
          Length = 436

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 65/435 (14%), Positives = 160/435 (36%), Gaps = 15/435 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +L   H A   R+ + +  GI+ L+  WS    +E      G ++    +  +++P  GI
Sbjct: 12  HLPEFHSAKHSRILIFTCAGILLLLFVWSAFAHVEEVTRGDGRVIPSRQMQIVQAPERGI 71

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +     G  + QG  L+  ++      +   +     L+  +    +     N + D+
Sbjct: 72  VSEVMFYEGEIVEQGAVLVKLDNTGFASQLGELQQKKYALQARLARLMAEARQANLQLDL 131

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                +         +  +     +V+      +   + +  ++      +   LE ++ 
Sbjct: 132 SNTPSD---------IAAFLQRELEVYKARKDQLNAEVAVLRSQFSQKEQDLKQLEAEAQ 182

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           +L + L+   ++L + + L+++  + + +  + +R       E +       +      E
Sbjct: 183 MLGSNLTIIARELEINQQLYKRGVLPEIEFLRLKRQYTTMHGEQQMLEASLASARSAKQE 242

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                      +  +   DL   +   A    +L   E    +  +++P+ G I      
Sbjct: 243 AMQRVVSAQTAFASKAQSDLVATKAELAVIEERLRGAEDRVHRSALVAPVRGVINKLNVS 302

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q  +PL++IVP      I A++ P+ +  +  G   +V+   Y        + +
Sbjct: 303 TIGAVVQAGEPLVEIVPLEDTLLIAAQIQPQHVAFLHPGQDVSVKVTAYDYSIYGGLEGV 362

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I P  S+ +     Q +++VI++     L   +N + +  G  A +       ++  
Sbjct: 363 LERISPDTSEDER---GQAFFKVIVRTRQNHLGSEENPLPITPGMTASIDILTGEKSVLS 419

Query: 425 EIIHPITDNWPKIFE 439
            I  P+     + F 
Sbjct: 420 YIAKPLIKVKAEAFR 434


>gi|254469572|ref|ZP_05082977.1| HlyD family secretion protein [Pseudovibrio sp. JE062]
 gi|211961407|gb|EEA96602.1| HlyD family secretion protein [Pseudovibrio sp. JE062]
          Length = 438

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 143/410 (34%), Gaps = 12/410 (2%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ +  I  +V +SG I  +    +++    GI+ +  V++G ++  G  L   ++    
Sbjct: 35  WASVAKINSAVITSGSIAVDGQAKKVQHQEGGIVGEILVKDGDEVKAGDVLFRLDETVVK 94

Query: 94  DLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + + +  +   +     +  E      +     ++E A         +          
Sbjct: 95  ANLAITRKRLHQMQAQEARLSAEWRREQRVIFPETLVELAKTD------EIAATALDGEQ 148

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +F+     +    K    ++  +      L+ +       +    + L+   +L EK  
Sbjct: 149 ALFDARQQGIKGRKKQLGEQIAQLEQQIEGLQVQRDAKAESIDLVTQQLSDFSSLLEKRL 208

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           ++ + +   +R   +   +    I +       I+E   +       +L+++  DL+  +
Sbjct: 209 INASQVTAIKRERAELIGDRGGLISQIAQTKEAISEKRVQILQLDEEFLEKVLSDLQTIR 268

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A+   +    E   ++  I +P +G +      +          LM +VP      I
Sbjct: 269 SQIAELEEQEVAAEDRLKRIDIRAPQSGYVHQLAVHTVGGVIAPGDTLMLVVPEDSELVI 328

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            ++V P  +  ++ G  A VR   +      +  A +  + P +++ +  +  + +Y   
Sbjct: 329 ESRVQPIDVDQLQVGQDAYVRLAAFDQRTTPELSAAVLNVSPDLTRDE--VTGEPFYLAR 386

Query: 391 LKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           LKI +      N   L  G P E        T+    I P+ D      +
Sbjct: 387 LKILESEMPKLNGQTLVPGMPVEGFIQTGERTVLSYFIKPLQDQIAHALK 436


>gi|189500593|ref|YP_001960063.1| type I secretion membrane fusion protein, HlyD family [Chlorobium
           phaeobacteroides BS1]
 gi|189496034|gb|ACE04582.1| type I secretion membrane fusion protein, HlyD family [Chlorobium
           phaeobacteroides BS1]
          Length = 472

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 138/399 (34%), Gaps = 14/399 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +      G+I+    +  I+S   G+++K  V+ G  +  G  L+  +    T  +  ++
Sbjct: 86  DEVTRGMGKIIPSSRLQVIESLDGGVVEKILVQEGVVVKSGDLLMRIDPTRYTSSLQERQ 145

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             + +L       ++  +  ++  D+ E   +         + +       ++   +   
Sbjct: 146 YEVLSLIARASRLRALAE--DSPLDLPEDKLKD--------VPQIVEHEKHLYEESLKGF 195

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + +   ++        ++E +    R       ++L   + L +  AVS+ ++ +  
Sbjct: 196 DSQMIIMKEKLSQREHELEEVEARQIQARQAYGLAAQELNRTQPLLKSGAVSEVEVIRLR 255

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R V  +  E    I  +  + R + E  ++      N   E   +L       +      
Sbjct: 256 RDVANAKGERDAAIARKATLERSVEEAREQIQETELNTRNEWREELADVLSKISSMSQGA 315

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
             L    E+  I +P+ GT+      +     +    +  IVP      +  KV+PK I 
Sbjct: 316 KGLADRVERAEIKAPVNGTVQRLYINTLGGVVKPGGRVADIVPLDDSLEVEVKVSPKDIA 375

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            V  G  A V+   Y        KA + +I P     +       +Y V +K T  A   
Sbjct: 376 FVHPGQKALVKLTAYEFSIYGGLKADVYQISPDTVTDEE---GNTFYLVRVK-TPAASIR 431

Query: 401 NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
             + +  G  A+V       T+   ++ PI        +
Sbjct: 432 EGLPIIPGMMAQVDILTGKRTVLAYLLKPILRATSNAMK 470


>gi|153010757|ref|YP_001371971.1| HlyD family type I secretion membrane fusion protein [Ochrobactrum
           anthropi ATCC 49188]
 gi|151562645|gb|ABS16142.1| type I secretion membrane fusion protein, HlyD family [Ochrobactrum
           anthropi ATCC 49188]
          Length = 471

 Score =  293 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 56/438 (12%), Positives = 153/438 (34%), Gaps = 19/438 (4%)

Query: 10  KRNHPASLKRMTLLSI----IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  + L+ + +  +    +   G   W+    +  +  + G ++ +     I     G
Sbjct: 43  REDSRSPLRGLIIAGLATIGVAFGGFFAWAYSANLGSAAVAMGTVIVDSKRKTISHLEGG 102

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNN 122
           I+ +  V+ G  +  G PLL  +D +    +   + +++ +      +  E+S    ++ 
Sbjct: 103 ILDRLLVQEGDIVKVGQPLLRLDDTKARSDLQSLESRRIGLIAKLARLRAEQSGEKEISF 162

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                +    ++     + +          F   ++     + ++   +           
Sbjct: 163 PEGFADGGENAQNAIRAENI---------FFQKRLAQKLSKIDIQQKTIEQYTEQAKAST 213

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           ++ +     +    +    + +L EK    ++ L + +  + +   +  E   ++    +
Sbjct: 214 SQIAATDRQIELISEQRKAIASLVEKGFAQKSKLTEIDTRLSQLAGDRGEYAGDKAKAEQ 273

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                        ++   EI+ ++  +Q   +D   ++   +    +  + SP  G +  
Sbjct: 274 AKAGAEFALTGIESDLQSEIAGEITSSQVELSDVQERIVAAKDVMRRVEVRSPQDGIVAN 333

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +        + +M IVP ++   +  K++P+ I  +  G  A +R   Y       
Sbjct: 334 IRLRTPGGVIAPGEAIMDIVPENEPLVVEMKISPRDIDSISVGAGAQIRLTAYNQRSMAP 393

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI-ELRNGFPAEVLFTAKNTT 421
               +  I    S  +       ++    +IT  + + N    L  G PAE++   K   
Sbjct: 394 LDGKLTYIAADQSLDEKTDTA--FFVARAEITPASLAANPTARLYPGMPAEIIIVHKERR 451

Query: 422 LAQEIIHPITDNWPKIFE 439
               ++ PITD+  + F 
Sbjct: 452 AIDYLVSPITDSLNRAFR 469


>gi|288960452|ref|YP_003450792.1| type I secretion membrane fusion protein [Azospirillum sp. B510]
 gi|288912760|dbj|BAI74248.1| type I secretion membrane fusion protein [Azospirillum sp. B510]
          Length = 451

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 69/421 (16%), Positives = 156/421 (37%), Gaps = 6/421 (1%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
            TL  ++G  G + W     ++ +  ++G ++ E +   +     GI++   V++G  + 
Sbjct: 34  GTLAVLVGFGGFLLWGFTASLDSAALAAGTVMVESHRKTVSHLEGGILRDLLVKDGDLVQ 93

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G  LL  +  ++  ++   +         +   ++            E    +R+  + 
Sbjct: 94  AGQVLLRMDSTQSQAVVAQLQGQYWTALARLGRLRAEQSEAPKPLFADELVKAARDNPVA 153

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               +  +   ++F     S    L ++  ++  +      L+++       L   Q +L
Sbjct: 154 ---AEALAVEERLFRSRTDSYEAQLGIQRRQISQLRDEIAALDSQRVATSDRLRYTQDEL 210

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            ++++L  K    +  L + +R V  S   L E +  +    + I               
Sbjct: 211 RVVRDLLAKGYERKPRLLELQRNVADSEGRLGELMANKSKAEQAIAAAELTMINIGNTRR 270

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E++ DL+  Q + AD   +L   +    ++ + +P AG +   + F+          ++
Sbjct: 271 SEVATDLQTAQASVADLSERLRGADDVLLRQAVTAPQAGRVTGLKFFTPGGVIPAGAGIL 330

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IVP      + A+V+P  +Q+V+ G  A V+F  Y           +  +     + D 
Sbjct: 331 DIVPQDDAMIVEARVSPHDVQNVEVGSKAMVKFTGYRQRAVPPVAGQVVSLSADQLEDDR 390

Query: 380 NLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                 Y+   + +      +  ++EL  G PAEV+            + P+TD   + F
Sbjct: 391 TGT--FYFAARISMDAAELKALPSVELHPGMPAEVMIHGHARRAIDYFLTPLTDGLQRAF 448

Query: 439 E 439
            
Sbjct: 449 R 449


>gi|254471336|ref|ZP_05084738.1| HlyD family secretion protein [Pseudovibrio sp. JE062]
 gi|211959482|gb|EEA94680.1| HlyD family secretion protein [Pseudovibrio sp. JE062]
          Length = 438

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 59/410 (14%), Positives = 143/410 (34%), Gaps = 12/410 (2%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ +  I  +V +SG I  +    +++    GI+ +  V++G ++  G  L   ++    
Sbjct: 35  WASVAKINSAVITSGSIAVDGQAKKVQHQEGGIVGEILVKDGDEVKAGDVLFRLDETVVK 94

Query: 94  DLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + + +  +   +     +  E      +     ++E A         +          
Sbjct: 95  ANLAITRKRLHQMQAQEARLSAEWRREQRVIFPETLVELAKTD------EIAATALDGEQ 148

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +F+     +    K    ++  +      L+ +       +    + L+   +L EK  
Sbjct: 149 ALFDARQQGIKGRKKQLGEQIAQLEQQIEGLQVQRDAKAESIDLVTQQLSDFSSLLEKRL 208

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           ++ + +   +R   +   +    I +       I+E   +       +L+++  DL+  +
Sbjct: 209 INASQVTAIKRERAELIGDRGGLISQIAQTKEAISEKRVQILQLDEEFLEKVLSDLQTIR 268

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A+   +    E   ++  I +P +G +      +          LM +VP      I
Sbjct: 269 SQIAELEEQEVAAEDRLKRIDIRAPQSGYVHQLAVHTVGGVIAPGDTLMLVVPEDSELVI 328

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            ++V P  +  ++ G  A VR   +      +  A +  + P +++ +  +  + +Y   
Sbjct: 329 ESRVQPIDVDQLQVGQDAYVRLAAFDQRTTPELSAAVLNVSPDLTRDE--VTGEPFYLAR 386

Query: 391 LKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           LKI +      N   L  G P E        T+    + P+ D      +
Sbjct: 387 LKILESEMPKLNGQTLVPGMPVEGFIQTGERTVLSYFVKPLQDQIAHALK 436


>gi|110632974|ref|YP_673182.1| HlyD family type I secretion membrane fusion protein [Mesorhizobium
           sp. BNC1]
 gi|110283958|gb|ABG62017.1| type I secretion membrane fusion protein, HlyD family
           [Chelativorans sp. BNC1]
          Length = 432

 Score =  293 bits (749), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 66/438 (15%), Positives = 154/438 (35%), Gaps = 21/438 (4%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             +K           +    G+ G  TW+ L P+E +V + G+++ +     ++    GI
Sbjct: 5   AGVKTGFTGPFIAGLVSLTAGLGGFATWAALAPLEGAVIAPGKVVVQGRNKTVQHLEGGI 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNK 123
           +K   VE+G  +  G PLL  +        D  +  +  +         E+ +   ++  
Sbjct: 65  VKTILVEDGENVEAGDPLLVLDGTAAKSAADRLRAQLAAIEATEARALAERESAKSISFP 124

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +L          L D   +        F++ +      +     ++ ++         
Sbjct: 125 AHLLASQKPEIVRLLADQEAE--------FDFRLREHGAEIATFELQIAALEAQIAGHTV 176

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER---IVYKSTLELRENIHEQKNM 240
           +       L    ++   ++ L  K    ++ +   +R    ++    +L   I E +  
Sbjct: 177 QQEETARQLELLVEERQALETLLAKGLTRKSQVLALKRNEAELHGRQGQLAAAIAESRRT 236

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           +  I E  ++     +    + S  L + +   A+ + +L   E    +  + +P +GT+
Sbjct: 237 MAEIRERIEQVR---SARTSKASAQLSELRLKRAEVLEQLRAAEDVSGRLVVRAPASGTV 293

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           +    ++        + LM IVP      + A++ P  I  ++ G  A + F  +   + 
Sbjct: 294 INLAKYNPGAVIAPGEDLMSIVPEESGLVVEARIRPLDIDEIRVGQEARLNFSAFDARQT 353

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKN 419
              +  +  +     + +     + YY   L+I   + +  +  ++  G  AEV  T   
Sbjct: 354 PPIETKVVYLSADRFESER---GEPYYIARLEIPAGSGAGFDPSKIGPGQEAEVFITTGE 410

Query: 420 TTLAQEIIHPITDNWPKI 437
            T    I  P+     + 
Sbjct: 411 RTFFGYIAAPLMKTLSRS 428


>gi|163745370|ref|ZP_02152730.1| type I secretion membrane fusion protein, HlyD family [Oceanibulbus
           indolifex HEL-45]
 gi|161382188|gb|EDQ06597.1| type I secretion membrane fusion protein, HlyD family [Oceanibulbus
           indolifex HEL-45]
          Length = 436

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 69/436 (15%), Positives = 160/436 (36%), Gaps = 9/436 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            + + +    L    L   +   G  TW++   I  +V +SG I  + N   ++    G+
Sbjct: 5   SDKRWSATRPLILGFLGLFVLFGGFGTWAMTSQITGAVVASGRIEVDRNRQIVQHETGGV 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNK 123
           + K  V+ G  +  G  LL  +  + T  + + +  +  L   R  ++ ++   + +   
Sbjct: 65  VAKILVDEGDSVAAGDVLLQLDAEQLTSQLAIIEGQLYELMARRGRLEAQRDEAEEVVFD 124

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++   A  + + Q      +       +F+    SV + L+    R   I      ++ 
Sbjct: 125 KELNAAASANPDVQ------ELVDGQRNLFDARRVSVAQELEQLGKRRAQINAQIRGVDA 178

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + + L   L   +++L   ++L ++     + +   +R   +   ++ E   ++      
Sbjct: 179 QETALARQLELIEEELGNQQSLLDRGLTQASAVLNLQREQARLRGQIGELSAQKAQSQER 238

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           + E+  E     +   +E    L   +    +   +   L+   ++  I +P++G I   
Sbjct: 239 VTEIDIERLKLRSAGREEAITQLRDLRYRELEIAEQRRALKGEIDRLYIRAPVSGVIYAM 298

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           Q  +  +  + ++PLM +VP  +   I ++V    I  V  G    +R          + 
Sbjct: 299 QVQTPRSVVRAAEPLMYLVPQDRPLIIASRVQTIHIDQVAVGQEVNLRLSALNQRTTPEL 358

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
              + ++     + D   QT    E+ L   +    +    L  G P E        T  
Sbjct: 359 VGKVLQVSADSIEDDATGQTYYRAEIALNPGETDKLEEGTILLPGMPVEAFIRTGERTPM 418

Query: 424 QEIIHPITDNWPKIFE 439
             ++ P+ D + + F 
Sbjct: 419 AYLLKPMADYFARAFR 434


>gi|239833736|ref|ZP_04682064.1| type I secretion membrane fusion protein, HlyD family [Ochrobactrum
           intermedium LMG 3301]
 gi|239821799|gb|EEQ93368.1| type I secretion membrane fusion protein, HlyD family [Ochrobactrum
           intermedium LMG 3301]
          Length = 471

 Score =  292 bits (747), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 56/438 (12%), Positives = 151/438 (34%), Gaps = 19/438 (4%)

Query: 10  KRNHPASLKRMTLLSI----IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  + L+ + +  +    +   G   W+    +  +  + G ++ +     I     G
Sbjct: 43  REDSRSPLRGLIIAGLATIGVAFGGFFAWAYSANLGSAAVAMGTVIVDSKRKTISHLEGG 102

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNN 122
           I+ +  V+ G  +  G PLL  +D +    +   + +++ +      +  E++    ++ 
Sbjct: 103 ILDRLLVQEGDIVKVGQPLLRLDDTKARSDLQSLESRRIGLIAKLARLRAEQAGEKEISF 162

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                E    ++     + +          F   ++     + ++   +           
Sbjct: 163 PASFAESGENAQNAIRAENI---------FFQKRLAQKLSKIDIQQKTIEQYTEQAKAST 213

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            + +     +         + +L EK    ++ L + +  + +   +  E   ++    +
Sbjct: 214 AQIAATDRQIELISDQRKAIASLVEKGFAQKSKLTEIDTRLSQLAGDRGEYAGDKAKAEQ 273

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                        ++   EI+ ++  +Q   +D   ++   +    +  + SP  G +  
Sbjct: 274 AKAGAEFALTGIESDLQSEIAGEITSSQVELSDVQERIVAAKDVMRRVEVRSPQDGIVAN 333

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +        + +M IVP ++   +  K++P+ I  +  G  A +R   Y       
Sbjct: 334 IRLRTPGGVIAPGEAIMDIVPENEPLVVEMKISPRDIDSISVGAGAQIRLTAYNQRSMAP 393

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI-ELRNGFPAEVLFTAKNTT 421
               +  I    S  +       ++    +IT  + + N    L  G PAE++   K   
Sbjct: 394 LDGKLTYIAADQSLDEKTDTA--FFVARAEITPASLAANPTARLYPGMPAEIIIVHKERR 451

Query: 422 LAQEIIHPITDNWPKIFE 439
               ++ PITD+  + F 
Sbjct: 452 AIDYLVSPITDSLNRAFR 469


>gi|84515753|ref|ZP_01003114.1| type I secretion membrane fusion protein, HlyD family [Loktanella
           vestfoldensis SKA53]
 gi|84510195|gb|EAQ06651.1| type I secretion membrane fusion protein, HlyD family [Loktanella
           vestfoldensis SKA53]
          Length = 430

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 62/435 (14%), Positives = 156/435 (35%), Gaps = 19/435 (4%)

Query: 12  NHPASLKRMTLL----SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             P  ++R  ++      + + G  TW++L  I  +V +SG+I  + N   ++ PF G++
Sbjct: 2   TAPWPVRRYLIIGAATLAVLVGGFGTWAVLAQINGAVITSGQIEVDRNRQVVQHPFGGVV 61

Query: 68  KKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
               V  G  +  G  L+  +  +      +++ +   I   R  ++ E+     L    
Sbjct: 62  TDILVVEGDTVANGDLLIRLDPSDLQSELAIVEGQYFDILAHRARLEAERDDAAALTFDP 121

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + +    +          +      ++F   + +  +S+     +   I      +  +
Sbjct: 122 ILRDAGTPA--------AAELMQGQERLFAARLETSLQSIHQLTQQRAQIASQITGITAQ 173

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            + L+       ++L   ++L ++       +   +R        + E           +
Sbjct: 174 QTALQTQQRLITRELADQQSLLDRGLAQAGRVLALQREEASLQGRVGELTAMAAQAAERM 233

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E+  +     +   ++    L   Q    +   +   L +  ++  I +P++G +   Q
Sbjct: 234 TEIEIQVLGLASTRREQAISRLRDLQFNQLELAERRQTLLRQLDRLDIRAPVSGVVYAIQ 293

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
            F+  +  + + PL+ ++P  +   I  +V    I  V  G   T+RF  +   R  +  
Sbjct: 294 VFAPRSVIRPADPLLFLIPQDRPLIIATQVQSTDIDQVFVGQDVTLRFSAFDQRRTPELA 353

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTL 422
             + ++       +  +  Q YY   +++          ++ L  G P E      + + 
Sbjct: 354 GRVTRLSADAFADE--VTGQSYYRAQVQVNAGEMRRLPIDLTLMPGMPVEAFMRTDDRSP 411

Query: 423 AQEIIHPITDNWPKI 437
              +I P+ D + + 
Sbjct: 412 MDYLIKPLADYFTRA 426


>gi|270263080|ref|ZP_06191350.1| hypothetical protein SOD_d00960 [Serratia odorifera 4Rx13]
 gi|270042768|gb|EFA15862.1| hypothetical protein SOD_d00960 [Serratia odorifera 4Rx13]
          Length = 445

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 65/403 (16%), Positives = 149/403 (36%), Gaps = 12/403 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           SI  P++  V++ G +    N   ++S  +G I   +V+ G ++     L+    ++   
Sbjct: 43  SIFAPLDQGVTAQGIVQVAGNSKTVQSSAAGTIAAIKVKEGERVRANQLLIQLNTVQAQA 102

Query: 95  LID---LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +D      ++   +   +  E+     ++   ++       ++ Q    L +  +   +
Sbjct: 103 QVDTYREHYLTSSAVEARLLAERDGKPRVDYPAEL------QQQVQNNPRLAEILALQDQ 156

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F    +++   L+     M  +      +EN     +  L S ++ L  M +L     +
Sbjct: 157 LFFSRRTALNSELEAYRQSMAGVRFQLQGVENAQGSRQIQLQSFREQLNNMASLVADGYL 216

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            +N   + +R          ++  ++    + + E         A+Y KE+   L Q Q 
Sbjct: 217 PRNRYLEIQRQYADIRSTQAQSQGQRGQFKQQLLEGEQNIARRQADYQKEVRTQLTQTQM 276

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             A+  SKLT+     +   I +P+ GT+V  + F++       +PL+ IVP ++   + 
Sbjct: 277 DIAEYRSKLTMASNDLQYTEIRAPLDGTVVGLKVFTAGGVVSTGEPLLDIVPSNRRLDVE 336

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            ++    +  V+ G    + F  +      K +  +  I             + YY + +
Sbjct: 337 VQLPVNLVDKVQPGLQVDLMFTAFNQNATPKVQGEVALISADRLTDQR--SGEPYYNMKV 394

Query: 392 KITDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
            +          + +  G P  V       +L   +  P+ D 
Sbjct: 395 TVPQAQIKRLGEKTIVPGMPVSVFVRTGERSLLNYLFKPVVDR 437


>gi|146276171|ref|YP_001166330.1| HlyD family type I secretion membrane fusion protein [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145554412|gb|ABP69025.1| type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 433

 Score =  292 bits (747), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 64/416 (15%), Positives = 151/416 (36%), Gaps = 12/416 (2%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           + + G  TWS    I  ++  SG+I    N   ++ P  G+++  +V  G+ +  G  LL
Sbjct: 22  VLVGGFGTWSAFSSIAGAIVVSGQIEVAQNRQVVQHPDGGVVESIEVTEGASVRAGDILL 81

Query: 86  TFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            F+         +++ +   +   R  ++ E+   + L  + ++LE             +
Sbjct: 82  RFDGASLRTELAIVEGQLFEMLARRARLEAERDDAEALAFRPELLEAGKGRTA------V 135

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            +      ++F     S  + +     R   I      ++ + + L   L   +++LT  
Sbjct: 136 AEQVEGQQRLFVARRESFAQQIDQLGKRKGQINSQIAGVDAQMAALGTQLRLIEEELTDQ 195

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + L  K     + +   +R   +   EL E    + N    I EL  E     +   +E 
Sbjct: 196 QGLLAKGLAQASRVLSLQREQARLQGELGELAASRANAEGRITELDIEILRLGSTRREEA 255

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              L        +   +   L +  ++  + +P++G ++  Q  +     + + P++ ++
Sbjct: 256 ITQLRDFGYRELELAERRGALIEQIQRLDLRAPVSGIVLGLQVTTPRAVIRPADPVLYLI 315

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P  +   I A+V P  +  V++G    + F  ++     +    +  +       +    
Sbjct: 316 PQDRPLVIAAQVPPIHVDEVREGQPVRLVFSAFSSRTTPELAGHVSVLSADALTDNRTQT 375

Query: 383 TQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              +Y   + +        ++  L  G P E        +    ++ P TD + + 
Sbjct: 376 A--FYRAEIALEPGEMEKLDDRTLLPGMPVEAFIRTSERSPIAYLLKPFTDYFNRA 429


>gi|56698547|ref|YP_168923.1| HlyD family type I secretion membrane fusion protein [Ruegeria
           pomeroyi DSS-3]
 gi|56680284|gb|AAV96950.1| type I secretion membrane fusion protein, HlyD family [Ruegeria
           pomeroyi DSS-3]
          Length = 433

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 71/414 (17%), Positives = 149/414 (35%), Gaps = 13/414 (3%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
             TW++L  I  +V + G I  + N   ++    G++ +  V+ G  + +G  L+  +  
Sbjct: 26  FGTWAVLSQIAGAVVAGGRIEVDRNRQVVQHLDGGVVAEILVDEGDTVPEGQTLIRLDSN 85

Query: 91  ETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                +   + +   +   R  ++ E+ +   +    D+LE A    E   L        
Sbjct: 86  LLNSQLLIAEGQLFELMARRGRLEAERDSNSEIVFDEDLLEAARARAEVAEL------LD 139

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              ++F     SV +  +    R   I      +  +    R+ L   +++L   ++L +
Sbjct: 140 GQERLFRARQESVTKETEQLEKRRGQIGNQIEGIVAQQRSRRSQLELIEQELVSQQSLLD 199

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           K       +   ER   +   EL E I  Q      I E+  E         ++    L 
Sbjct: 200 KGLAQAGRVLSLERTKAELEGELGELIASQAQQEGRITEIDIEILKLGTTQREDAITQLR 259

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             Q    +   +   L +   +  I +P++G +   Q  +  +  + + P++ +VP  + 
Sbjct: 260 DLQYRELEVAEQRRSLLEQLSRLDIKAPVSGIVYGLQVHTPRSVIRPADPVLFLVPQDRP 319

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             I AKV    I  +  G + T+RF         +    + ++       + +     YY
Sbjct: 320 LVIAAKVETIHIDQIHLGQSVTLRFSALDQRLTPELIGTVMQVSADAFVDEASQA--SYY 377

Query: 388 EVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            V +++ +           L  G P E      + +    ++ P+ D + K F 
Sbjct: 378 RVEIQLNEGEVDKLPPGAILIPGMPVEAFIRTADQSPIYYLVKPLADYFTKAFR 431


>gi|192361457|ref|YP_001981883.1| HlyD family secretion protein [Cellvibrio japonicus Ueda107]
 gi|190687622|gb|ACE85300.1| HlyD-family secretion protein [Cellvibrio japonicus Ueda107]
          Length = 481

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 56/393 (14%), Positives = 139/393 (35%), Gaps = 14/393 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I+      G+++    +  I+S   G+++   V  G  + +G  LL  +          
Sbjct: 93  EIDEVARGEGKVIPSSQLQVIQSFDGGVVEAVLVHEGQVVEKGDLLLRIDSTRFVSSYRE 152

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +     L+      ++                 +  E+++       +   +++   + 
Sbjct: 153 NRAEFLALKARAARLQALTLGTEF----------TLPEEVIRESADIATHEQRLYETNLR 202

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +   L +  +++        ++  K +     L    ++L + + L    A+S+ ++ +
Sbjct: 203 ELDEQLAISRSQLEQRQQELNEVRAKLTQAIRSLELTSQELKVTRPLLASGAISEVEILR 262

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E  V ++  +  ++  ++  ++  + E   +      N   +   +L       A    
Sbjct: 263 LEGEVARARGDKEQSAAQESRLILAVQEAEVKLRETELNTRNKWRAELSDVLSKAATLGE 322

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
             T L    +   I +P+ GTI    + +     Q  + ++++VP      + AKV+P+ 
Sbjct: 323 SGTGLADRIKYAEIRAPVRGTIQRIYTNTLGGVVQPGREVIEMVPLDDQLLVEAKVSPRD 382

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  +  G  A V+F  Y  +     K  +E I P     +       +Y V ++     F
Sbjct: 383 IAFLHPGQEAIVKFTAYDFVVYGGLKGKVELISPDAITDEKERT---FYIVRVRTERAGF 439

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               + +  G   +V       T+   ++ P+ 
Sbjct: 440 DPA-LPIMPGMMTQVDILTGKKTVLSYLLKPVL 471


>gi|153831706|ref|ZP_01984373.1| membrane-fusion protein [Vibrio harveyi HY01]
 gi|148872216|gb|EDL71033.1| membrane-fusion protein [Vibrio harveyi HY01]
          Length = 446

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 71/427 (16%), Positives = 159/427 (37%), Gaps = 15/427 (3%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            +    L   + + GL  W+    +E +  + G++       EI+    GII+K  V+ G
Sbjct: 30  PILLGVLTLSLFLGGLGYWAATAKLESAAIAYGDLSVLSKRQEIQHLEGGIIEKLYVQEG 89

Query: 76  SQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             + +G  LL     +    +D    + +        ++ E   L  +N   D+      
Sbjct: 90  DLVEKGQVLLRLSKRQANAKLDSLGGQYIHTIAKENRLNAELDELPDINWARDLETIQNG 149

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
               +      K      + F+  ++ + +S+           L   +L     + R  L
Sbjct: 150 EIVAEAKLVQSKIFEARKRFFDSKLNIIAQSISGA-------NLELDNLSETKVIERERL 202

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              ++++   + L +K    ++ L Q +R+  +    L +   +   + + ++E   +  
Sbjct: 203 KFIEEEIASNQALVQKGFSGKSALLQLKRLAAEVRSTLSQLDRQSLTVSKRLDENQAKIE 262

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                 L EI  +L   ++       +    +    +  I++PI+G +V  Q F+     
Sbjct: 263 ELKLERLNEIVEELRNTKKELVSIREEYRSAKDIVARTDIVAPISGRVVNMQVFTEKGVI 322

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              + L+++VP      + A+V+P+ I  +  G  A VR               +  I  
Sbjct: 323 GSGETLLELVPQDDKLLVEARVSPQDIDLITPGQHAQVRLTALNARTLAPLDGTVLTISA 382

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
               + N     ++Y   + ++    + +   L +G  AEVL  ++  T    ++ P+T+
Sbjct: 383 DKLSEQN---QDDFYLARIALSQEDIAKH--RLTSGMNAEVLILSEPRTPLSYLVKPLTE 437

Query: 433 NWPKIFE 439
           +  + F 
Sbjct: 438 SMNRAFR 444


>gi|254472468|ref|ZP_05085868.1| HlyD family secretion protein [Pseudovibrio sp. JE062]
 gi|211958751|gb|EEA93951.1| HlyD family secretion protein [Pseudovibrio sp. JE062]
          Length = 437

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 69/403 (17%), Positives = 140/403 (34%), Gaps = 13/403 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I  ++ + G I+ E N   ++    GI++   V +G  +  G  LL  +D  T   + +
Sbjct: 41  EIRGAIIAPGTIVVETNTKNVQHMEGGIVRSIMVTDGDTVDAGDTLLRLDDTVTRANLAV 100

Query: 99  KKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
               + NL      +  E+   + +       + A       + +   +     +K    
Sbjct: 101 VTKQLDNLYSQEARLIAERDGEEEILFPSRAADDAHSQVLNTIQEGQRRMMVAKTKNLRG 160

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
               +   ++    ++  +   R   E +  L+         +L  +  L  K  V+++ 
Sbjct: 161 RQDQMRAQIEQYKKQIDGLSQQRDAKEIEIGLIDG-------ELEDLHKLLAKKLVTESR 213

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           +   +R   K   E  + I +       I E   +      + + +    L+Q +   A 
Sbjct: 214 VTALKREKTKLQGEYGDFIAQIAKTEEAIAERNIQIMQIEEDVMTKTLEQLQQVRAEIAQ 273

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              K    +    +  I SP +GT+      +        + +M+IVP   +  I A+V 
Sbjct: 274 LEEKKIAAQDQLMRMEIKSPQSGTVHDLTIHTIGGVIAPGEVVMQIVPREDVLVIEAQVQ 333

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           P  +  +     ATVR P +      +  A ++ I P + +         +Y   L I++
Sbjct: 334 PIDVDQLTPNQEATVRLPSFDQRTTPELTAAVKTISPDLLED--PKTGLSFYMAELTISE 391

Query: 396 LAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
                     L  G P E     +N T+   I+ P+ D     
Sbjct: 392 DEMDKLGGKNLVPGMPVEAFIQTENRTVISYIMKPMVDQIAHA 434


>gi|304392979|ref|ZP_07374910.1| metalloprotease transporter [Ahrensia sp. R2A130]
 gi|303294977|gb|EFL89346.1| metalloprotease transporter [Ahrensia sp. R2A130]
          Length = 486

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 63/417 (15%), Positives = 156/417 (37%), Gaps = 8/417 (1%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
              + I+       W+   PI  +  + G ++       ++    GIIK+  V  G ++ 
Sbjct: 71  GIAIVILFFGVFGGWATTAPISGAAVAPGTVVASGQNFRLQHFEGGIIKEIMVREGDRVE 130

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P+L+ +  +     D+    +   +  +   ++  D ++          E+ E+   
Sbjct: 131 PGQPILSLDPTQAQATRDMVSNQLLAYQARVQRLRAERDNVDMGVTA-----EAAEKFRA 185

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             +        + F+  ++      K+   +M ++      LE +   ++  + +  ++L
Sbjct: 186 AGMAGDLEEQEREFDKRVARYESEAKIYDQQMLALEEQISGLEIQRISVKEQMENLTQEL 245

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           T  K L ++    +++  + +R   +    L     +       I E  ++ +   A   
Sbjct: 246 TAKKRLVDRKLTPRSEYLRLKRNYSELEGRLGALTSDVGRAKSSIAEALEQKSRLTAARS 305

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++   +L   +   +  + +    E+   +  + +P AGT+V     +     +  + + 
Sbjct: 306 EQAVAELNNVRTEISSLVERRRAAEEVLSRVILRAPAAGTVVSLNKNTPGAVVRAGEDIA 365

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I+P      + A+++P+    +  G  A +RF         +  + +  I       + 
Sbjct: 366 VILPAGGELIVEARMSPRDGSIISVGQAAKLRFASLNTRTTPEVDSEVTYISADSVVDER 425

Query: 380 NLQTQEYYEVILKITDLAFSDNNI-ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
               + Y  V LKI +   S  ++ E+  G P E      + T A+ +I P+ D++ 
Sbjct: 426 TQ--EPYIVVRLKIPETLPSQIDVSEIYAGMPVESYVVTGDRTFAEYVIRPLVDSFN 480


>gi|163743536|ref|ZP_02150914.1| type I secretion membrane fusion protein, HlyD family [Phaeobacter
           gallaeciensis 2.10]
 gi|161383239|gb|EDQ07630.1| type I secretion membrane fusion protein, HlyD family [Phaeobacter
           gallaeciensis 2.10]
          Length = 435

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 64/423 (15%), Positives = 149/423 (35%), Gaps = 9/423 (2%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             L   + + GL  W+    I  +V +SG I  E N   ++ P+ G++ +  V  G  + 
Sbjct: 17  GLLAMGLLVGGLGQWAATAEISGAVIASGSIKVEQNRQVVQHPYGGVVDEVLVSEGDLVE 76

Query: 80  QGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           +   LL  E  E      +++ +       R     E+   + +     + E +    + 
Sbjct: 77  EDALLLRLEPSELLAERQIVEGQLAETLARRSRYSAERDEAEEVTFAELLFELSGTHVQT 136

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +      +  +   ++F   + ++   +     R+  I      +E + S L+  L    
Sbjct: 137 E------ELINGQKRLFEARLVNLRARISRLQERIGQIQSQIDGIEAQQSALQEQLVLIG 190

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L   ++L  +     + +   +R   +   +      ++      + EL  E   + +
Sbjct: 191 QELENQQSLLSQGLAQSSRVLSLQREQSRLRGQAGALTAQKAQAEGQVTELGLEILNQRS 250

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              +E    L   Q    + + +  ++ +   +  + +P++G +     F+  +  + + 
Sbjct: 251 ARREEAITTLRDLQVRELELIERRNLILQRLSRLEVRAPVSGLVYDLNVFARKSVIRAAD 310

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           PLM ++P S+   I A+V P  I  V      ++ F  +           +  +      
Sbjct: 311 PLMYLIPQSQPLVISAQVAPSDIDQVYLNQPVSLNFSSFNQRTTPTLFGTVSTVSADSFV 370

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
                ++    E  L   ++        L  G P E      + T    ++ P TD   +
Sbjct: 371 DPQTGRSYYVVEARLNKGEIDRLPEGNVLVPGMPVETFIQTNSRTPFAYLLQPFTDYLNR 430

Query: 437 IFE 439
            F 
Sbjct: 431 AFR 433


>gi|28901298|ref|NP_800953.1| putative protein secretion protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|153836033|ref|ZP_01988700.1| membrane-fusion protein [Vibrio parahaemolyticus AQ3810]
 gi|260362855|ref|ZP_05775724.1| membrane-fusion protein [Vibrio parahaemolyticus K5030]
 gi|260880143|ref|ZP_05892498.1| membrane-fusion protein [Vibrio parahaemolyticus AN-5034]
 gi|260895260|ref|ZP_05903756.1| membrane-fusion protein [Vibrio parahaemolyticus Peru-466]
 gi|260900612|ref|ZP_05909007.1| membrane-fusion protein [Vibrio parahaemolyticus AQ4037]
 gi|28809811|dbj|BAC62786.1| putative protein secretion protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149750787|gb|EDM61532.1| membrane-fusion protein [Vibrio parahaemolyticus AQ3810]
 gi|308085760|gb|EFO35455.1| membrane-fusion protein [Vibrio parahaemolyticus Peru-466]
 gi|308091871|gb|EFO41566.1| membrane-fusion protein [Vibrio parahaemolyticus AN-5034]
 gi|308106979|gb|EFO44519.1| membrane-fusion protein [Vibrio parahaemolyticus AQ4037]
 gi|308111997|gb|EFO49537.1| membrane-fusion protein [Vibrio parahaemolyticus K5030]
          Length = 446

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 81/436 (18%), Positives = 166/436 (38%), Gaps = 17/436 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            NL    P  L   TL   +G  GL  W+    +E +  + G++       EI+    GI
Sbjct: 23  ANLSFKKPILLGVATLSFFLG--GLGYWAATAKLESAAIAYGDLSVLTKRQEIQHLEGGI 80

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNK 123
           I+K  V+ G  + +G PL+     +    +D    + +        +  E   L  ++  
Sbjct: 81  IEKLYVQEGDLVKKGQPLVQLSQRQPMAKLDAVSGQYIHTLAKENRLSAELDELADISWS 140

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D+      +  ++      K  +   + F   +S + +S+           L   +L+ 
Sbjct: 141 GDLEAIPRVNIVKEAQLVQNKIFTARKRFFESKLSIIEQSISGA-------SLELENLKQ 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
              + R  L+  ++++   + L +K    ++ L Q +R+  +    L +   +   + + 
Sbjct: 194 TKVIERERLNFIEEEIASNQALVQKGFSGKSTLLQLKRLAAEVRSTLSQLDRQSLTVGKR 253

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++E   +        L EI  +L   ++       +    +    + +I +PI+G +V  
Sbjct: 254 LDENQAKIEELKLERLNEIVEELRNTKKEVVAIREEYRSAQDVVARTSINAPISGRVVNM 313

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           Q F+        Q L+++VP      + A+V P+ I  +  G  A VR            
Sbjct: 314 QVFTEKGVIGSGQTLLELVPQDDKLLVEARVNPQDIDLINPGQQAHVRLTALNARTLAPL 373

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
              +  +      Q+N     +YY   + I+    +     L +G  AEVL  ++  T  
Sbjct: 374 DGTVLTVSADKLSQEN---QDDYYLARISISQDDVAK--YRLTSGMNAEVLILSEPRTPL 428

Query: 424 QEIIHPITDNWPKIFE 439
             +I P+T++  + F 
Sbjct: 429 SYLIKPLTESMNRAFR 444


>gi|163740050|ref|ZP_02147454.1| Type I secretion membrane fusion protein, HlyD [Phaeobacter
           gallaeciensis BS107]
 gi|161386681|gb|EDQ11046.1| Type I secretion membrane fusion protein, HlyD [Phaeobacter
           gallaeciensis BS107]
          Length = 435

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 66/423 (15%), Positives = 149/423 (35%), Gaps = 9/423 (2%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             L   + + GL  W+    I  +V +SG I  E N   ++ P+ G++ +  V  G  + 
Sbjct: 17  GLLAMGLLVGGLGQWAATAEISGAVIASGSIKVEQNRQVVQHPYGGVVDEVLVSEGDLVE 76

Query: 80  QGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           +   LL  E  E      +++ +       R     E+   + +     + E +    + 
Sbjct: 77  EDALLLRLEPSELLAERQIVEGQLAETLARRSRYSAERDEAEEVTFAELLFELSGTHVQT 136

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +      +  +   ++F   + ++   +     R+  I      +E + S L+  L    
Sbjct: 137 E------ELINGQKRLFEARLVNLRARISRLQERVGQIQSQIDGIEAQQSALQEQLVLIG 190

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           K+L   ++L  +     + +   +R   +   +      ++      + EL  E   + +
Sbjct: 191 KELENQQSLLSQGLAQSSRVLSLQREQSRLRGQAGALTAQKAQAEGQVTELGLEILNQTS 250

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              +E    L   Q    + + +  ++ +   +  + +P+AG +     F+  +  + + 
Sbjct: 251 ARREEAITTLRDLQVRELELIERRNVILQRLSRLDVRAPMAGVVYDLNVFARKSVIRAAD 310

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           PLM ++P S+   I A+V P  I  V      ++ F  +           +  +      
Sbjct: 311 PLMYLIPQSQPLVISAQVAPSDIDQVYLNQPVSLNFSSFNQRTTPTLFGTVSTVSADSFV 370

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
                ++    E  L   ++        L  G P E      + T    ++ P TD   +
Sbjct: 371 DPQTGRSYYVVEARLNKGEIDRLPEGNVLVPGMPVETFIQTNSRTPFAYLLQPFTDYLNR 430

Query: 437 IFE 439
            F 
Sbjct: 431 AFR 433


>gi|83312575|ref|YP_422839.1| membrane-fusion protein; multidrug resistance efflux pump
           [Magnetospirillum magneticum AMB-1]
 gi|82947416|dbj|BAE52280.1| Membrane-fusion protein; Multidrug resistance efflux pump
           [Magnetospirillum magneticum AMB-1]
          Length = 589

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 76/438 (17%), Positives = 165/438 (37%), Gaps = 20/438 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +L  ++P    R    +++ +    I W+ +  ++    + GEI+ E  V  I+    G+
Sbjct: 164 SLANSYPLPTWRPLARAVMSLTAIFIVWAFVAHLDEVAIAEGEIVPEGKVKVIQHLEGGV 223

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNK 123
           +++    +GS++ +G PL+  +   ++   +  +  +      R  ++ E      L++K
Sbjct: 224 VREIMATDGSEVKEGAPLILLDLPVSSLNKEELQARMDGYILQRARLEAE------LHDK 277

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             V  +    R+  L++       +  + F     ++  +L +   ++R   L   + E 
Sbjct: 278 PVVFPEEEAKRQPGLVE-------SERRSFEARRQALNATLTVLRDQVRQKGLEVQEYET 330

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           KS  +   L   Q+ L M  +L +    S+ D  Q +  V     +L             
Sbjct: 331 KSRSIATSLRLSQERLAMSTDLIKSGLASKMDHVQIQAQVEDLKGQLDSVRASIPRAEAA 390

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E     + E A + +    ++ + +   A            + +  I SPI G +   
Sbjct: 391 QQEAKGRVSEELARFQRTAQSEMSEAELNIARTRELFIQATDQQRRTLISSPIDGIVKNM 450

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +S +     +   P+M+IVP  +   + AK+ P    +V+ G  ATV+   Y        
Sbjct: 451 RSNTIGGVVRPGDPIMEIVPLHERLQVDAKLNPMDRGYVQTGQRATVKISAYDYTTYGGL 510

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTT 421
              +  + P  +        Q YY V+++       D   +  +  G  A V       +
Sbjct: 511 DGDVILVAPDTT-VPQTPNAQPYYRVVVQTDRAYIGDETAKRLISAGMQATVEIHTGTRS 569

Query: 422 LAQEIIHPITDNWPKIFE 439
           + + ++ P+     + F 
Sbjct: 570 IMEFLVKPVIKLRHEAFR 587


>gi|298368964|ref|ZP_06980282.1| protein secretion ABC efflux system, membrane fusion protein
           [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282967|gb|EFI24454.1| protein secretion ABC efflux system, membrane fusion protein
           [Neisseria sp. oral taxon 014 str. F0314]
          Length = 409

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 74/442 (16%), Positives = 158/442 (35%), Gaps = 70/442 (15%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +   L++   +    + +L  I ++  + W+   PIE      G ++       ++S 
Sbjct: 16  NDLNAALQKEKHSGQFWVIILFFIFLVVFVIWAYNSPIEEVTRGQGNVIPSSREQVVQSL 75

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFL 120
             GII +  V+ G  + +G  LL  +D  ++ ++   +  ++NL   I   K+      L
Sbjct: 76  DPGIITEILVKEGDIVEKGQVLLKLDDTRSSAVLRESEAKVQNLEAMIARLKAEAYGKEL 135

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +   +V   + E R+ +   ++ +                                 R  
Sbjct: 136 SFPKNV---SNELRQREHAAYVAR---------------------------------RRA 159

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           + +  S L A  ++  K++ +   +  +  VS+ +L +  R   + TL++ E        
Sbjct: 160 VTDAVSSLTASKAALDKEIEITAPMVAQGVVSEVELLRMRRQSSELTLQITE-------- 211

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                            Y+ + + +L Q +   A     + +     ++  I +P+ G +
Sbjct: 212 -------------RRNRYMADANNELVQAESELAQAKENMAMRADPVDRSQIRAPMRGIV 258

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              Q  +        Q +M+IVP      + A + P+ +  ++ G  A V+   Y     
Sbjct: 259 KDIQINTVGGVVNVGQDIMQIVPLDDKLLVEAYIRPQDVAFIRPGLPAVVKVSAYDYSIY 318

Query: 361 KKFKAIIEKIDPIISQQDNNLQT--------QEYYEVILKITDLAFSDNN---IELRNGF 409
                 +  I P         +         Q YY ++++ T  +  D N   + +  G 
Sbjct: 319 GGLNGKVTLISPDTVSNSMQNRANDLKLDPNQVYYRILVQTTSNSLKDKNGKEMPIIPGM 378

Query: 410 PAEVLFTAKNTTLAQEIIHPIT 431
            A V       T+ Q +I PIT
Sbjct: 379 VATVDVKTGEKTVFQYLIKPIT 400


>gi|156976384|ref|YP_001447290.1| hypothetical protein VIBHAR_05157 [Vibrio harveyi ATCC BAA-1116]
 gi|156527978|gb|ABU73063.1| hypothetical protein VIBHAR_05157 [Vibrio harveyi ATCC BAA-1116]
          Length = 446

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 71/427 (16%), Positives = 160/427 (37%), Gaps = 15/427 (3%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            +    L   + + GL  W+    +E +  + G++       EI+    GII+K  V+ G
Sbjct: 30  PILLGVLTLSLFLGGLGYWAATAKLESAAIAYGDLSVLSKRQEIQHLEGGIIEKLYVQEG 89

Query: 76  SQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             + +G  LL     +    +D    + +        ++ E   L  +N  +D+      
Sbjct: 90  DLVEKGQLLLRLSKRQANAKLDSLGGQYIHTFVKENRLNAELDELPDINWAHDLETIQNG 149

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
               +      K      + F+  ++ + +S+           L   +L     + R  L
Sbjct: 150 EIVAEAKLVQSKIFEARKRFFDSKLNIIAQSISGA-------DLELDNLSETKVIERERL 202

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              ++++   + L +K    ++ L Q +R+  +    L +   +   + + ++E   +  
Sbjct: 203 KFIEEEIASNQALVQKGFSGKSALLQLKRLAAEVRSTLSQLDRQSLTVSKRLDENQAKIE 262

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                 L EI  +L   ++       +    +    +  I++PI+G +V  Q F+     
Sbjct: 263 ELKLERLNEIVEELRNTKKELVSIREEYRSAKDIVARTDIVAPISGRVVNMQVFTEKGVI 322

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              + L+++VP      + A+V+P+ I  +  G  A VR               +  I  
Sbjct: 323 GSGETLLELVPQDDKLLVEARVSPQDIDLITPGQHAQVRLTALNARTLAPLDGTVLTISA 382

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
               + N     ++Y   + ++    + +   L +G  AEVL  ++  T    ++ P+T+
Sbjct: 383 DKLSEQN---QDDFYLARIALSQEDVAKH--RLTSGMNAEVLILSEPRTPLSYLVKPLTE 437

Query: 433 NWPKIFE 439
           +  + F 
Sbjct: 438 SMNRAFR 444


>gi|254443671|ref|ZP_05057147.1| type I secretion membrane fusion protein, HlyD family
           [Verrucomicrobiae bacterium DG1235]
 gi|198257979|gb|EDY82287.1| type I secretion membrane fusion protein, HlyD family
           [Verrucomicrobiae bacterium DG1235]
          Length = 495

 Score =  289 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 74/423 (17%), Positives = 148/423 (34%), Gaps = 63/423 (14%)

Query: 15  ASLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           +    + L  I+GII     W+    ++      G+++  D++  ++S   GI+ +  V 
Sbjct: 120 SPYASLLLFVIVGIISAFTYWASTSKVDEITRGQGKVVPTDSLQIVQSLEGGILSQLNVS 179

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKA 130
            GS + +G  LL  ++   T           NL      ++ E + L+ L     + E  
Sbjct: 180 EGSIVNKGDTLLRIDNTAFTAAKSESAAQRDNLMATIARLEAEAADLETLEFPEHITETR 239

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +  + +   F  +                                 R +L      L  
Sbjct: 240 PDLVKSETSLFQSR---------------------------------RSNLAGSILHLSK 266

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L   +K+L +   L E+  VSQ +L + + IV  +  EL                    
Sbjct: 267 SLELKKKELEITIPLAERGIVSQVELLRLQSIVNDTESELIRVTS--------------- 311

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                 +Y KE+     + +         +   +   ++  I+SP+ GTI      +   
Sbjct: 312 ------DYNKEVLSKRNEAKAKLEQVQQSIYAFDDKIQRTNIVSPVNGTINRVNFNTIGG 365

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  +P+++IVP+     I A + P  I  ++ G  ATV+   Y        K ++E+I
Sbjct: 366 VIRSGEPIVEIVPYESDLIIEANILPSDIGFIRPGQEATVKLTAYDFSIYGGLKGVVEQI 425

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQEIIH 428
               +  +       +Y + ++  + +      + ++  G   EV     N T+   I  
Sbjct: 426 SADTTTDER---GDSFYTIQVRTGERSLKTGSQDFKIIPGMQVEVNILTGNKTVLDYIFK 482

Query: 429 PIT 431
           P+ 
Sbjct: 483 PLL 485


>gi|295677457|ref|YP_003605981.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           sp. CCGE1002]
 gi|295437300|gb|ADG16470.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           sp. CCGE1002]
          Length = 414

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 77/439 (17%), Positives = 150/439 (34%), Gaps = 64/439 (14%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M+      L ++ P S+  + ++  I  +GL TWS    +E      G I+++     I+
Sbjct: 23  MNDIKESLLTQSTPGSVIMLYVILAILSVGL-TWSHFARVEEITHGDGTIISKSREQVIQ 81

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--D 118
           S   GI+++  V  G  + +G  L   +                 L+  I   ++     
Sbjct: 82  SLEGGILEQLDVREGDIVKKGQVLAKIDPTRAETSYREAWSKSVGLKATIARLRAEAYGQ 141

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L    DV       ++E L                                  +    R
Sbjct: 142 ALTFPDDVKGVPAVVKQETL----------------------------------AYNARR 167

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             L++  + L    S   K++ + + L  K  VS+ +L +  R       +LR  I E++
Sbjct: 168 RALDDSVAALEKSYSLSGKEIGLAEPLAAKGLVSEVELLRMRRQAN----DLRSQIVERR 223

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           N                  +  + + +L + +   A     +       E+ T+++P+ G
Sbjct: 224 N-----------------KFQADANSELTKLELELAQTSETVVGRADVLERTTVVAPVYG 266

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T+   +  +     Q  + +M+IVP      + A + P  +  +  G  ATV+   Y   
Sbjct: 267 TVKNVRVNTIGGVIQPGEHIMEIVPLEDQLLVEAHIKPSDVAFLHPGQPATVKITAYDYG 326

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQE----YYEVIL--KITDLAFSDNNIELRNGFPAE 412
                   +E I P   + D           YY V++    ++L     ++ +  G  A 
Sbjct: 327 IYGGLTGKVEHISPDTLKDDQKAAAGRADATYYRVLVLTDTSELHAGGKSLPILPGMVAT 386

Query: 413 VLFTAKNTTLAQEIIHPIT 431
           V       T+   ++ PI 
Sbjct: 387 VDIRTGEKTILDYLLKPIF 405


>gi|328469236|gb|EGF40182.1| putative protein secretion protein [Vibrio parahaemolyticus 10329]
          Length = 446

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 80/436 (18%), Positives = 166/436 (38%), Gaps = 17/436 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            NL    P  L   TL   +G  GL  W+    +E +  + G++       EI+    GI
Sbjct: 23  ANLSFKKPILLGVATLSFFLG--GLGYWAATAKLESAAIAYGDLSVLTKRQEIQHLEGGI 80

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNK 123
           I+K  V+ G  + +G PL+     +    +D    + +        +  E   L  ++  
Sbjct: 81  IEKLYVQEGDLVKKGQPLVQLSQRQPMAKLDAVSGQYIHTLAKENRLSAELDELADISWS 140

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D+      +  ++      K  +   + F   +S + +S+           L   +L+ 
Sbjct: 141 GDLEAIPRVNIVKEAQLVQNKIFTARKRFFESKLSIIEQSISGA-------SLELENLKQ 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
              + R  L+  ++++   + L ++    ++ L Q +R+  +    L +   +   + + 
Sbjct: 194 TKVIERERLNFIEEEIASNQALVQRGFSGKSTLLQLKRLAAEVRSTLSQLDRQSLTVGKR 253

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++E   +        L EI  +L   ++       +    +    + +I +PI+G +V  
Sbjct: 254 LDENQAKIEELKLERLNEIVEELRNTKKEVVAIREEYRSAQDVVARTSINAPISGRVVNM 313

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           Q F+        Q L+++VP      + A+V P+ I  +  G  A VR            
Sbjct: 314 QVFTEKGVIGSGQTLLELVPQDDKLLVEARVNPQDIDLINPGQQAHVRLTALNARTLAPL 373

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
              +  +      Q+N     +YY   + I+    +     L +G  AEVL  ++  T  
Sbjct: 374 DGTVLTVSADKLSQEN---QDDYYLARISISQDDVAK--YRLTSGMNAEVLILSEPRTPL 428

Query: 424 QEIIHPITDNWPKIFE 439
             +I P+T++  + F 
Sbjct: 429 SYLIKPLTESMNRAFR 444


>gi|91976042|ref|YP_568701.1| Type I secretion membrane fusion protein, HlyD [Rhodopseudomonas
           palustris BisB5]
 gi|91682498|gb|ABE38800.1| Type I secretion membrane fusion protein, HlyD [Rhodopseudomonas
           palustris BisB5]
          Length = 451

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 76/421 (18%), Positives = 158/421 (37%), Gaps = 15/421 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L  + +IG   WS L  +E +V +SG +  + N+ E++    GI+K   V  G  + +G 
Sbjct: 40  LVALLVIGCGGWSALAKLEGAVITSGAVKVDQNLKEVQHRDGGIVKMLAVRQGDFVREGQ 99

Query: 83  PLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            L T +D++    + + +  +      R  +  E+  L  ++   ++   +  S      
Sbjct: 100 VLATLDDVQIKAELLIVRSQLSEALGRRARLTAERDNLAAIDFPSELTGLSTTSET---- 155

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                      ++F     +     +     +         +E + +     +     + 
Sbjct: 156 -----VMVGERRLFAGNKLTRDSQKEQLELSVGQTGEEINGMEARLAAKEEEIKLVSAER 210

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +  LF++  V    +   +R   +   E  E             E+  +      N  
Sbjct: 211 EKLLGLFDRKIVEYARVYSVQRDWARILGERGEIAAGIARAKVRTTEIRLQIIAVDQNAS 270

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E  R+L       A+   +   +E    +  I +PIAG +     F+       +  + 
Sbjct: 271 TEAQRELRTVDARIAELSERRVAIEDRLARTDIKAPIAGYVNELFVFTVGGVITPAARIA 330

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IVP +       K+ P  I  V++G  A VR   ++     + +A + ++ P  +   +
Sbjct: 331 TIVPDNAALRFEVKIAPVDIDQVREGQPARVRLSAFSRATTPELQARVAQVSP--APARD 388

Query: 380 NLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               QE Y   +++TD A +  + + L  G PAEV  + +  T A  ++ P++D + + F
Sbjct: 389 PATGQESYIAYVQLTDEAAALIHGLRLVPGMPAEVFISTQERTAASYLLKPMSDQFNRAF 448

Query: 439 E 439
            
Sbjct: 449 R 449


>gi|317485605|ref|ZP_07944481.1| HlyD family type I secretion membrane fusion protein [Bilophila
           wadsworthia 3_1_6]
 gi|316923142|gb|EFV44352.1| HlyD family type I secretion membrane fusion protein [Bilophila
           wadsworthia 3_1_6]
          Length = 458

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 62/431 (14%), Positives = 140/431 (32%), Gaps = 15/431 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +   L R      + ++L   +  + L  W+    I+    ++G++++      I++ 
Sbjct: 31  NEVEAALARKPRLGARFLSLAVGLFFLILGIWANFAEIDEVTHANGQVISSQRTQIIQNL 90

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GI+    V  G  + +GTPL   ++          +  I  L   +   +   +    
Sbjct: 91  EGGILGAVLVGEGEIVEKGTPLAQLDNKLAESQYRDAQNRI--LENELSIIRLDAELKGE 148

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                E    S  + + D +         +F+         + +  ++         +L 
Sbjct: 149 SPAFPEDLSVSHPQAIADQMA--------IFHAREQQQNAEMGLLQSQYEQRSREVEELT 200

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +       L+   +   +   L ++   S+ D    E+ V     ++            
Sbjct: 201 GRKRQTERSLALAVEQRNIAAPLMQRKIYSRVDYLGLEQKVVSLQGDIESLASSIPKAQA 260

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              E      L  A    EI+ ++ + +         L        +  + SP+ GT+  
Sbjct: 261 AAEEAKQRLTLRKAEMEAEINAEISKRRTELNSLKETLAAGGDRVTRTELKSPVRGTVKQ 320

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +     +  + +M+IVP      + A+V P  +  +  G  A V+   Y       
Sbjct: 321 IYINTVGGVVKPGEAIMEIVPLDDTLLVEARVRPADVAFLHPGQKAMVKISAYDFSIYGG 380

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNT 420
            +A +E+I     +     + + +Y V ++    A       + +  G    V       
Sbjct: 381 LEADLEQISADTIED---KRGEFFYLVKVRTHKNAISYRKEQLPIIPGMVTTVDILTGKK 437

Query: 421 TLAQEIIHPIT 431
           T+   I+ PI 
Sbjct: 438 TVLDYILKPIL 448


>gi|91223302|ref|ZP_01258568.1| putative protein secretion protein [Vibrio alginolyticus 12G01]
 gi|91192115|gb|EAS78378.1| putative protein secretion protein [Vibrio alginolyticus 12G01]
          Length = 446

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 74/435 (17%), Positives = 158/435 (36%), Gaps = 15/435 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             + N    +    +   + + GL  W+    +E +  + G++       EI+    GII
Sbjct: 22  KARLNFRKPILLGVVTLSVFLGGLGYWAATAKLESAAIAYGDLSVLTKRQEIQHLEGGII 81

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKY 124
           +K  V+ G  + +G  L+     +    +D               +  E   L  +    
Sbjct: 82  EKLYVQEGDLVEKGQLLIQLSKRQAMAKLDSLSGRFIHTLAKENRLSAELDELPTIVWSD 141

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D+         ++      K      + F+  +S + +S+      +        +L+  
Sbjct: 142 DLESIPRVDIVQEAQLVQNKIFEARKRFFDSKLSIIEQSISGANLELE-------NLQQT 194

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             +    L+   +++   + L +K    ++ L Q +R+  +    L +   +   + + +
Sbjct: 195 KVIETERLNFIAEEIDSNQALVQKGFSGKSTLLQLKRLAAEVRSTLSQLDRQSLTVRKRL 254

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E   +        L EI  +L   +        +    +    + TI +PI+G +V  Q
Sbjct: 255 DENLAQIEELKLERLNEIVEELRNTKTEIVAIREEYRSAQDIVARTTINAPISGRVVNMQ 314

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
            F+        + L+++VP      + A+V P+ I  V  G  A VR             
Sbjct: 315 VFTEKGVIGSGETLLELVPQDDKLLVEARVNPQDIDLVNPGQQAHVRLTALNARTLAPLD 374

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             +  I      Q+N    +++Y   + I+    + +   L +G  AEVL  ++  T   
Sbjct: 375 GTVLTISADKLSQEN---QEDFYLARIAISPEDVTKH--RLTSGMNAEVLILSEPRTPLS 429

Query: 425 EIIHPITDNWPKIFE 439
            +I PIT++  + F 
Sbjct: 430 YLIKPITESMNRAFR 444


>gi|163743518|ref|ZP_02150896.1| putative toxin secretion transmembrane protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161383221|gb|EDQ07612.1| putative toxin secretion transmembrane protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 467

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 66/438 (15%), Positives = 161/438 (36%), Gaps = 16/438 (3%)

Query: 8   NLKRNHPASLKRMTLLSII----GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            L R  P  ++++ +  ++       GL+ W+    +  +V +SG+     + + ++   
Sbjct: 32  ALPRTPPTRVRQLVMWMLVCGFGLFGGLVFWATQAEMTSAVVASGQFTVAGDRLSVQHLE 91

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
            GI+++  V  G  + +G  +   +      +  ++  +  S+   +  +  E +  D +
Sbjct: 92  GGIVREINVAEGDMVAEGDVIAVLDGRRMRASRAILTSQMASLLAQQARLQAELAEADQI 151

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               ++ +   E  +      L         VF    +     +++   R+  +      
Sbjct: 152 EVPAELDQLIAEDPQ------LVSLFEVQRDVFTSNRALYEGQVQILRDRISQLGKQLNG 205

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            + + + +   L+  + ++  +  L+EK  V +  L+ ++               + +N+
Sbjct: 206 RQARITAIEDQLTLIKGEVADLHKLYEKGLVPKTRLSDRQLQHTGLMGTFGALESDSENI 265

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              I E  +       + +  IS + +  Q    D   +L   E   +++ I +P AG +
Sbjct: 266 QERIAETEERILQVHRDTVNRISSETQLVQERILDLRQRLDAAEDVLDRQIIRAPQAGRV 325

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V     +        Q ++++VP      +  +V+P  I  V  G  A V+   Y+    
Sbjct: 326 VDLSINTLGQVLNPGQNVLELVPSGSDLIVETRVSPTDIDEVVTGGQARVQLTAYSFRST 385

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKN 419
              +  +  +        N      YY V ++I      +  N++   G PA+ +     
Sbjct: 386 PPVRGEVVMVAADSIADLN--SGIPYYRVHIRIPPEELAALPNVKTLPGMPAQAMIETGR 443

Query: 420 TTLAQEIIHPITDNWPKI 437
            TLA  ++ P+  +    
Sbjct: 444 QTLADYLLSPVLRSMSNA 461


>gi|269962776|ref|ZP_06177117.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832466|gb|EEZ86584.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 446

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 76/437 (17%), Positives = 162/437 (37%), Gaps = 17/437 (3%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
              LK   P  L  +TL   +G  GL  W+    +E +  + G++       EI+    G
Sbjct: 22  TAELKLKGPILLGVLTLSLFLG--GLGYWAATSKLESAAIAYGDLSVLSKRQEIQHLEGG 79

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNN 122
           II+K  V+ G  + +G  L+     +    +D    + +        ++ E   L  +N 
Sbjct: 80  IIEKLYVQEGDLVEKGQLLIQLSKRQANAKLDSLGGQYIHTLAKENRLNAELDELPEINW 139

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             D+          +      K      + F+  ++ + +S+           L   +L 
Sbjct: 140 AQDIETIKNAEIVAEAKSVQRKIFEARKRFFDSKLNIIAQSISGA-------NLELDNLN 192

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
               + R  L   ++++   + L +K    ++ L Q +R+  +    L +   +   + +
Sbjct: 193 ATKVIERERLKFIEEEIASNQALVQKGFSGKSALLQLKRLAAEVRSTLSQLDRQSLTVAK 252

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++E   +        L EI  +L   +        +    +    +  I++PI+G +V 
Sbjct: 253 RLDENQAKIEELKLERLNEIVEELRNTKTELVSIKEEYGSAKDVVARTAIVAPISGRVVN 312

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            Q F+        + L+++VP      + A+V+P+ I  +  G  A VR           
Sbjct: 313 MQVFTEKGVIGSGETLLELVPQDDKLLVEARVSPQDIDLIAPGQHAQVRLTALNARTLAP 372

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
               +  I      + N     ++Y   + +     + +   L +G  AEVL  ++  T 
Sbjct: 373 LDGTVLTISADKLSEQN---QDDFYLARIALAQEDVAKH--RLTSGMNAEVLILSEPRTP 427

Query: 423 AQEIIHPITDNWPKIFE 439
              ++ P+T++  + F 
Sbjct: 428 LSYLVKPLTESMNRAFR 444


>gi|254228704|ref|ZP_04922127.1| type I secretion membrane fusion protein, HlyD family [Vibrio sp.
           Ex25]
 gi|262396574|ref|YP_003288427.1| membrane-fusion protein [Vibrio sp. Ex25]
 gi|151938651|gb|EDN57486.1| type I secretion membrane fusion protein, HlyD family [Vibrio sp.
           Ex25]
 gi|262340168|gb|ACY53962.1| membrane-fusion protein [Vibrio sp. Ex25]
          Length = 446

 Score =  289 bits (740), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 76/428 (17%), Positives = 158/428 (36%), Gaps = 15/428 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +    +   I + GL  W+    +E +  + G++       EI+    GII+K  V+ 
Sbjct: 29  KPILLGVVTLSIFLGGLGYWAATAKLESAAIAYGDLSVLTKRQEIQHLEGGIIEKLYVQE 88

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           G  + +G  L+     +    +D               +  E   L  +    D+     
Sbjct: 89  GDLVEKGQLLIQLSKRQAMAKLDSLSGQFIHTLAKENRLSAELDELPTIVWSDDLESIPR 148

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               ++      K      + F+  +S + +S+      +        +L+    + R  
Sbjct: 149 VDIVQEAQLVQNKIFEARKRFFDSKLSIIEQSISGANLELE-------NLQQTKVIERER 201

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+   +++   + L +K    ++ L Q +R+  +    L +   +   + + ++E   + 
Sbjct: 202 LNFIAEEIDSNQALVQKGFSGKSTLLQLKRLAAEVRSTLSQLDRQSLTVSKRLDENQAQI 261

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                  L EI  +L   ++       +    +    + TI +PIAG +V  Q F+    
Sbjct: 262 EELKLERLNEIVEELRNTKKEIVAIREEYRSAQDIVARTTINAPIAGRVVNMQVFTEKGV 321

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               + L+++VP      + A+V P+ I  V  G  A VR               +  I 
Sbjct: 322 IGSGETLLELVPQDDKLLVEARVNPQDIDLVNPGQQAHVRLTALNARTLAPLDGTVLTIS 381

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
                Q+N    +++Y   + I+    + +   L +G  AEVL  ++  T    +I PIT
Sbjct: 382 ADKLSQEN---QEDFYLARIAISQEDVAKH--RLTSGMNAEVLILSEPRTPLSYLIKPIT 436

Query: 432 DNWPKIFE 439
           ++  + F 
Sbjct: 437 ESMNRAFR 444


>gi|163850592|ref|YP_001638635.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium extorquens PA1]
 gi|163662197|gb|ABY29564.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens PA1]
          Length = 460

 Score =  289 bits (739), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 69/420 (16%), Positives = 163/420 (38%), Gaps = 13/420 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L          W+  + ++ +V S+G I+ E +   ++    G+++   V++G  +  G 
Sbjct: 47  LIAAAFGVAGAWAATVRLDRAVISTGVIVAETSRKVVQHFEGGMVQAVLVKDGQTVRSGD 106

Query: 83  PLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            LL  + +++    DL +  +     L   +  E++  D L    D+  +  E       
Sbjct: 107 VLLRIDPLQSQASADLFRNQLDAALVLEARLRAEQAQSDDLQLPADIAARRNEP------ 160

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             L +     +       +++   L +   ++  +      L  + S +   +   +++L
Sbjct: 161 -ALARMIGDQAGQLAERRTTLKGQLALIEAKVTQLRTEISGLAVEKSSVEQQVGFIRQEL 219

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +++L E+N +  + L   ER   +    +  ++ E+      I+E   +         
Sbjct: 220 EGLRSLHERNLIPLSRLLVMERERTRLEGVIGRSVAERAKAENAISEAGLQVTQLKQKLQ 279

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           + ++  L + ++   +   KL + +    +  I +   G I   + F+     +  +PLM
Sbjct: 280 EAVTGQLVETRQRIGELREKLVVAQDVFRRHEIRASHDGVIQGLKVFAIGQVVRSGEPLM 339

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +IVP +    +  + +P  ++ V  G  A ++FP +   R       +  +       + 
Sbjct: 340 EIVPTADRLVVNVQFSPNDLEAVHAGMRAEIKFPTFQARRTPAVFGTLTVVSRDRLVDEG 399

Query: 380 NLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               Q Y+   ++I +    ++    L  G PAEV+ +A   T  + +  P  D   + F
Sbjct: 400 --SKQAYFAGTVEIDEHQLPAEVRHRLLAGLPAEVVVSAGERTALEYLFAPFFDAMGRAF 457


>gi|91786212|ref|YP_547164.1| Type I secretion membrane fusion protein HlyD [Polaromonas sp.
           JS666]
 gi|91695437|gb|ABE42266.1| Type I secretion membrane fusion protein, HlyD [Polaromonas sp.
           JS666]
          Length = 471

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 62/429 (14%), Positives = 155/429 (36%), Gaps = 21/429 (4%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W  L++  P   +R+  L+   ++ L+ W+    ++        ++    V  I+S   G
Sbjct: 51  WARLQQ-EPLRARRLLRLAAGVLVLLVIWAYFAELDEVTRGEARVVPTSQVQIIQSVDGG 109

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNN 122
           +++   V  G  +  G  L+  +       +   + +  + +     ++       F N 
Sbjct: 110 VVEALLVREGQIVDAGQLLMRVDPTRFVSTMQESRAAQLSYQAKALRLEALTRGTPF-NP 168

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             D++ +A +   ++L            +++    + +   L +   ++        ++ 
Sbjct: 169 PADLVREAPDVVAQEL------------RLYESRRAEIGAQLYISQAQLSQRQQELNEVL 216

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +       L    ++L   + +    AVS+ ++ + ER V +   +  +   +   +  
Sbjct: 217 ARRDQAERSLELMNRELNATRPMIATGAVSEVEVLRLERDVARLRGDREQATAQISRVQS 276

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I E   +          ++S +L +     A        LE   +   I SP+ GT+  
Sbjct: 277 SILEATRKIEEVQLTSRNQMSGELSETMNKLATLSQGGRALEDKVKHADIKSPVRGTVKR 336

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +     Q  + ++++VP      +  ++TPK I  ++ G  A V+F  Y       
Sbjct: 337 LLVNTMGAVVQPGKEVVEVVPLDDALILEVQITPKDIAFLRPGQQAMVKFSAYDFSIYGG 396

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
            +A +  I       +   +   +Y V ++    +    N+ +  G  A+V       ++
Sbjct: 397 LEADVINIGADSVIDE---KGNAFYHVRVRTHKPSLGP-NLPIIPGMVAQVDILTGKKSV 452

Query: 423 AQEIIHPIT 431
              ++ P+ 
Sbjct: 453 LAYLLKPVL 461


>gi|47176986|ref|YP_015597.1| rhizobiocin secretional protein [Oligotropha carboxidovorans OM5]
 gi|47115388|emb|CAG28444.1| rhizobiocin secretional protein RspE [Oligotropha carboxidovorans
           OM5]
          Length = 447

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 67/443 (15%), Positives = 157/443 (35%), Gaps = 13/443 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     + L+R+    +   T +    ++G   W+    +  +V ++G ++ E NV  ++
Sbjct: 12  MTESTQRLLRRSMQRHVLFGTTIIAFLVVGAGGWATTTELAGAVIATGTVVVEGNVKVVQ 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSAL 117
            P  G++   +V  G  +  G  ++  ++      +         I   +  +  E+  L
Sbjct: 72  HPTGGVVADLRVREGQMVEAGEVVIRLDETTLRANLMVVSKGINQILARKARLLAEQENL 131

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + +    D+  +          D      +   ++F     S          R++ +   
Sbjct: 132 EDVPISSDLAARVT-------PDEAKTVTANEIRLFRDRRLSREGQKDQLRERIQQLQEQ 184

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
               + +       ++  +K+L  ++ L+E      + L+  ER   +   E  + I   
Sbjct: 185 ISGYKAQQGAKTDEIALIEKELEGVRYLYENGLTPISRLHNLERSSARLRGERGQLIASI 244

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 I E   E      N   E++ +L        + + +        E+  I +PIA
Sbjct: 245 AAAKGKIAETELELIQIDQNLRSEVATELRDLNVREGELIEREVAARDQLERVDIRAPIA 304

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +      +     +  + L+++VP  +   I A++  + I  +  G+ A +RF  +  
Sbjct: 305 GIVHQLAMHTVGGVVRPGEVLLQVVPIKRELDIEARIRAQDIDRIALGHEAVLRFVAFNR 364

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFT 416
               +    + K+               +Y+ I+ ++ D A       L  G P +    
Sbjct: 365 NSTPELIGAVTKVSADAIADSQTST--SFYKTIITLSADEARRLGRRTLVPGMPVDCYIR 422

Query: 417 AKNTTLAQEIIHPITDNWPKIFE 439
             + T+   ++ P+ D+  + F 
Sbjct: 423 TSDRTVLSYLVKPLVDHATRAFR 445


>gi|294142590|ref|YP_003558568.1| HlyD family secretion protein [Shewanella violacea DSS12]
 gi|293329059|dbj|BAJ03790.1| HlyD family secretion protein [Shewanella violacea DSS12]
          Length = 437

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 78/421 (18%), Positives = 155/421 (36%), Gaps = 11/421 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
               R+ L+ +  I+  I W+    +E  V    +++    V +I+S   GI+K+  V  
Sbjct: 14  KRANRLILIVLALIVSTIVWAHWATLEEVVIGQAKVVPTLAVQQIESLDGGILKRILVRE 73

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           G  +  G  LL  +++      D  ++S   ++  R  ++ E  ++         L K  
Sbjct: 74  GEIVTAGQALLVLDELRFASAFDEAQLSRKALRRQRARLEAELKSVTIEKLASHWLAKIT 133

Query: 132 -ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                 Q++D      S    +F+  +S +   L      +        +    +    +
Sbjct: 134 VNPHTIQVIDGEPSQRSEA--IFHSRLSQLNAQLDQAEQAVEQKIQALEENRIITRAQIS 191

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L   +K++ M +   ++ AV++ +L + ER   +   EL  +    + +    ++   E
Sbjct: 192 GLKLVRKEIAMTREAVDEGAVAELELLKLERDEIRLEGELLASKAMARQLKAVKSQAIGE 251

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                 ++      +  +     A     +  L    ++  I SPI G +      S   
Sbjct: 252 RLTLALDFRNRTEAERNEVINELAGLQESIKTLADRLDRTRISSPIDGKVTNILLRSLGA 311

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  +P+M IVP      I  ++ PK I  V  G  ATV+F  Y  +     K  +  +
Sbjct: 312 VVEPGEPIMAIVPSDGALIIETRIAPKDIAFVHPGLEATVKFTAYDFVIYGGLKGEVIYV 371

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            P   Q ++      YYE  +K  +     N   + +G  A       N T+    + P+
Sbjct: 372 SPDAQQLEDGTT---YYEAHVKTNENML--NGWPIISGMQASTDILTGNKTVLNYWLKPL 426

Query: 431 T 431
            
Sbjct: 427 L 427


>gi|218529318|ref|YP_002420134.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium chloromethanicum CM4]
 gi|218521621|gb|ACK82206.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium chloromethanicum CM4]
          Length = 458

 Score =  288 bits (738), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 69/420 (16%), Positives = 165/420 (39%), Gaps = 13/420 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L          W+  + ++ +V S+G I+ E +   ++    G+++   V++G  +  G 
Sbjct: 45  LIAAAFGVAGAWAATVRLDRAVISTGVIVAETSRKVVQHFEGGMVQAVLVKDGQTVRSGD 104

Query: 83  PLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            LL  + +++    DL +  +     L   +  E++  D L    D+  +  E    +++
Sbjct: 105 VLLRIDPVQSQASADLFRNQLDAALILEARLRAEQAQSDDLQLPADIAARRNEPVLARMI 164

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D      +         ++ +   +    T +  + + +  +E +   +R       ++L
Sbjct: 165 DDQAGQLAERRTTLKGQLALIEAKVTQLRTEISGLAVEKSSVEQQVGFIR-------QEL 217

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +++L E+N +  + L   ER   +    +  ++ E+      I+E   +         
Sbjct: 218 EGLRSLHERNLIPLSRLLVMERERTRLEGVIGRSVAERAKAENAISEAGLQVTQLKQKLQ 277

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           + ++  L + ++   +   KL + +    +  I +   G I   + F+     +  +PLM
Sbjct: 278 EAVTGQLLETRQRIGELREKLVVAQDVFRRHEIRASHDGVIQGLKVFAIGQVVRSGEPLM 337

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +IVP +    +  + +P  ++ V  G  A ++FP +   R       +  +       + 
Sbjct: 338 EIVPTADRLVVNVQFSPNDLEAVHAGMRAEIKFPTFQARRTPAVFGTLTVVSRDRLVDEG 397

Query: 380 NLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               Q Y+   ++I +    ++    L  G PAEV+ +A   T  + +  P  D   + F
Sbjct: 398 --SKQAYFAGTVEIDEHQLPAEVRHRLLAGLPAEVVVSAGERTALEYLFAPFFDAMGRAF 455


>gi|188579546|ref|YP_001922991.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium populi BJ001]
 gi|179343044|gb|ACB78456.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium populi BJ001]
          Length = 457

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 68/420 (16%), Positives = 162/420 (38%), Gaps = 13/420 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L +        W+  + ++ +V S+G I+ E +   ++    G+++   V +G  +  G 
Sbjct: 44  LIVAAFGVAGAWAATVRLDRAVISTGVIVAESSRKVVQHFEGGMVQAVLVRDGQTVRAGD 103

Query: 83  PLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            LL  + +++    DL +  +     L   +  E++  D L    D+  +  E    +++
Sbjct: 104 VLLRIDPVQSQASADLFRNQLDAALVLEARLRAEQAQSDDLQLPADLAARRDEPAVARMI 163

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                            ++ +   +    T +  + + +  +E +   +R       ++L
Sbjct: 164 SDQAGQLVERRTTLKGQLALIEAKVTQLRTEISGLAVEKSSVEQQVGFIR-------QEL 216

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +++L E+N +  + L   ER   +    +  ++ E+      I+E   +         
Sbjct: 217 EGLRSLHERNLIPLSRLLVMERERTRLEGVIGRSVAERAKAENAISEAGLQITQLKQKLQ 276

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           + ++  L + ++   +   KL + +    +  I +   G I   +  +     +  +PLM
Sbjct: 277 ETVTGQLLETRQRIGELREKLVVAQDVFRRHEIRASHDGVIQALKVVAIGQVVRSGEPLM 336

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +IVP +    +  + +P  ++ V  G  A ++FP +   R       +  +       + 
Sbjct: 337 EIVPTADRLVVNVQFSPNDLEAVHAGMRAEIKFPTFQARRTPAVFGTLTVVSRDRLVDEG 396

Query: 380 NLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               Q Y+   ++I +    +D    L  G PAEV+ +A   T  + +  P  D   + F
Sbjct: 397 TK--QAYFAGTVEIDEHHLPADVRHRLLAGLPAEVVVSAGERTALEYLFAPFFDAMGRAF 454


>gi|51244366|ref|YP_064250.1| secretion protein [Desulfotalea psychrophila LSv54]
 gi|50875403|emb|CAG35243.1| related to secretion protein [Desulfotalea psychrophila LSv54]
          Length = 466

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 61/440 (13%), Positives = 152/440 (34%), Gaps = 19/440 (4%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +   L  +  + L  +  +    I+ ++TW     ++      G  +    +  +++ 
Sbjct: 37  NSLSGALLASRSSRLNVLLYVICAIILTVVTWCHFAELDERTRGIGRTIPSRQIQVVQNL 96

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDF 119
             GIIK+  V  G  + +G  L+T +D             I  L      +  E    D 
Sbjct: 97  EGGIIKEIHVFEGESVKRGQILVTIDDTGIGSSYSESASKINELEAKSIRLSAESGITDT 156

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           L            + +++    + +      +++N  +        +   +++   +   
Sbjct: 157 L-----------IASKKETDSQMVQLMKNEKRLYNSQLRQHENQKSVLQQQLQQRKIELQ 205

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           D +      R+      +++ + + L +K  +S+ +  Q E+   +   E+   I++ ++
Sbjct: 206 DAQEDLKSFRSSQKMLNREIALSRPLLKKQLLSELEFLQLEQRDLEKKQEVNRTINKVES 265

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           +   I E  ++          E   +L                +E    + ++ SP+ GT
Sbjct: 266 LNVQIIEAKEKIEELDETRQAEAMEELNAVVAEIDRLAFMQVAIEDRVTRTSVRSPVNGT 325

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +      +     +    +++IVP  +   +  K+ P  I  +  G  A ++F  Y    
Sbjct: 326 VKQLLINTVGGVVRPGMDILEIVPTDEAIMVETKIKPSDIAFIYPGQKAILKFTAYDYAI 385

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTA 417
                  +  I       +   + +E+Y V +K       + + +  +  G  A+V    
Sbjct: 386 YGGLDGEVALISADTITDE---KGEEFYLVRVKSKQNYLGNEDSKKQIMIGMTAQVDIIT 442

Query: 418 KNTTLAQEIIHPITDNWPKI 437
              ++ Q ++ PI       
Sbjct: 443 GKKSVMQYLMKPILRAKNNA 462


>gi|148556907|ref|YP_001264489.1| HlyD family type I secretion membrane fusion protein [Sphingomonas
           wittichii RW1]
 gi|148502097|gb|ABQ70351.1| type I secretion membrane fusion protein, HlyD family [Sphingomonas
           wittichii RW1]
          Length = 471

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 74/433 (17%), Positives = 173/433 (39%), Gaps = 10/433 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            L+R+    ++   ++ +  +  L+ W+ +  I  +  ++G +  E+N   +    SG++
Sbjct: 42  ELERDLRRPMRTGGIVVLALVFALLVWAAVFKISGAAMATGVVKVENNSKNLSRLESGVV 101

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV---SIKNLRCHIDTEKSALDFLNNKY 124
           ++  V  G ++ +G  L+ F+D +    +D+ +    S          E +    +    
Sbjct: 102 RQIFVREGQKVAKGQLLIRFDDSQAGASVDIYQSVVDSSNAQIARFQAEAADAAAVAYPS 161

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++  +  + R   L+        T + ++      +    +   T++  + +    +E++
Sbjct: 162 ELRSRMNDPRVAALIQGQDALFQTRTTLYRSQALVLGSQAQQLETQINGLNIQAQAIEDQ 221

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           S L+R       ++L  ++ L  +     + L   ER   +   +    + +   + + I
Sbjct: 222 SKLIR-------EELDGVRELARQGYAPNSRLLALERNAVQVRGQKGSVMSDVARVRQSI 274

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            ++  +       +  E++  +   Q   AD + KL   +  R+Q  + +P+AG +    
Sbjct: 275 GQIRLQIAQLEDRHQTEVADGIRAAQEKLADAVPKLRASQVLRDQSEVRAPVAGYVFNLT 334

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
            F+    A   Q LM+IVP +    I A+V+P+ I  V+KG  A V    +         
Sbjct: 335 QFTEGGVAGAGQTLMQIVPTNTELIIAAEVSPRDISDVRKGMPARVTLLGFNPRLVSPVD 394

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             +  +       + +  +    E+ +   +LA +  N+ L  G PA V       ++  
Sbjct: 395 GTVSLVSADARVNEKSGTSYFLVEITVPAANLAKAGPNVHLTPGMPASVAIVTGERSILD 454

Query: 425 EIIHPITDNWPKI 437
            ++ P TD+    
Sbjct: 455 YLLEPFTDSMRTA 467


>gi|254469310|ref|ZP_05082715.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
 gi|211961145|gb|EEA96340.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
          Length = 451

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 66/404 (16%), Positives = 152/404 (37%), Gaps = 10/404 (2%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           +  + W+    +E      G I+    +  I+S   GI+K+  V+ G  + +G  L+  +
Sbjct: 45  VAFVVWASWAQLEEVTRGDGRIIPSAKIQVIQSLEGGIVKEVLVKTGDLVSKGDVLIRLD 104

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D   +  +      +   +  ++  +  L+F +      E+   +   Q  +   +  ++
Sbjct: 105 DTGFSSNLGE----LVAKQLALEIARERLEFQSVWPQRGEELSYTDHYQ--EKAPQIVAS 158

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              +F   +  +   + +  +R+          EN+   L  LL    ++  +   L EK
Sbjct: 159 ELSLFQANVEGLKGQVAINRSRVAQRMAELEASENQKRKLMELLRLANEERELKAPLAEK 218

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             + + D+ + +R +     ++      +  +   ++E   E    +  + +    ++ +
Sbjct: 219 QIIPRTDMLKLQREIGDLEGQINTLQVTEGRLQAAVDEAEQEIESLYIKFRQAARAEMSE 278

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            Q                 ++  I +P+ G +      +    A  SQ LM IVP   + 
Sbjct: 279 VQAQLDIISETSKGAGDKVKRAEIRAPMDGIVNTIDVSTIGGVASPSQQLMTIVPVEDIL 338

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            + AKV P+ I  + +G  A V+   Y           +E I       +  +  +++Y 
Sbjct: 339 LVEAKVKPQDIAFIHQGQQALVKLSAYDFSIYGGLDGEVEGISADTVYDE--VTHEQFYS 396

Query: 389 VILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           VI+K   T+L   + ++ +  G  A V       ++   I+ P+
Sbjct: 397 VIIKTKQTELESRNKSLPILPGMVASVDILTGEKSVLAYILKPV 440


>gi|16264639|ref|NP_437431.1| HlyD family protein secretion protein [Sinorhizobium meliloti 1021]
 gi|1890591|emb|CAB01939.1| ExpD2 [Sinorhizobium meliloti]
 gi|15140777|emb|CAC49291.1| putative membrane-fusion protein WgdB (formerly ExpD2)
           [Sinorhizobium meliloti 1021]
          Length = 473

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 66/436 (15%), Positives = 159/436 (36%), Gaps = 19/436 (4%)

Query: 12  NHPASLKRMTLL----SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N  + ++R+ +      ++   G   W+    +  +  +SG I+ +     +     G++
Sbjct: 47  NTHSPIRRLVIAGLTTILVAFGGFFGWAFSTELSSASVTSGTIVVDSKRKTVSHFEGGVL 106

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNKY 124
            +  V+ G  +  G PL+  ED      +     ++V +      +  E++ L  ++   
Sbjct: 107 GRILVQEGDHVAPGQPLMKLEDTRARSDLQALQSRRVGLIAKLARLRAERAGLHAVSFPA 166

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D++ +          +      +     F     +    L ++   +         L  +
Sbjct: 167 DLVSEG---------EAAADAVTAEKAFFEKRSEAKESRLAIQRKTIEEYSEKAKSLTAQ 217

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  +    +  T +  L EK    ++ L + +  + +      E   ++    + +
Sbjct: 218 LQATDRQIELMNEQRTAIATLVEKAFAQRSKLIEIDARLSELAATRGELAGDKAQAEKAM 277

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                      +++  EI+ ++   +   A+   ++T  E    +  I +P AG +   Q
Sbjct: 278 AGAELALIGIESDFQSEIAGEITTARLELAEVEQRITAAEDVLRRLEIRAPQAGIVANIQ 337

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +  +     QPL+ IVP  +   +   V+ + I  +  G +  +R   Y        +
Sbjct: 338 LRTPGSAVTPGQPLLDIVPEDEPLLVEMHVSTRDIDSITIGSSTQIRLTAYNQRSHLPLE 397

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTLA 423
             +  I     Q  +      Y+    ++T  + + N +I L  G PAEVL   K+ +  
Sbjct: 398 GKVTYIAAD--QSVDEKSNVAYFVARAEVTPESLAANPDIRLYPGMPAEVLIVHKSRSAI 455

Query: 424 QEIIHPITDNWPKIFE 439
             ++ P++D++ + F 
Sbjct: 456 DYLVAPVSDSFNRAFR 471


>gi|86139952|ref|ZP_01058517.1| putative toxin secretion transmembrane protein [Roseobacter sp.
           MED193]
 gi|85823370|gb|EAQ43580.1| putative toxin secretion transmembrane protein [Roseobacter sp.
           MED193]
          Length = 442

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 157/424 (37%), Gaps = 12/424 (2%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
              ++ + +  +  W+    +  +V  SGE+  + ++  ++    GI+K   V  G  + 
Sbjct: 25  GIFMAGLLVAAVFGWAANSNLVSAVVVSGEVSVDRDLRVVQHRDGGIVKDIPVSAGDHVR 84

Query: 80  QGTPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           +G  LL  +D        ++  K   +   +  ++ ++   +  +    + E        
Sbjct: 85  KGDILLRLDDTSASTERAILHGKIAELAIRKSRLEAQRDLHEEFSTPSGLDEFIVSPAAL 144

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q +      +    ++F   +SS  R  +     +  +      LE +    +  +   Q
Sbjct: 145 QAI------YVGEHRIFEGNLSSFIRRKEQIDLGIEQVRTEIDGLEARLDAKQDEILLVQ 198

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +   +++L E+    +N     ER   +   E  E +         ++EL  E      
Sbjct: 199 AESARVEDLSERQLTVRNVAFSIERENVRLRGEHGEILSALGRARSRVSELELEILSMQE 258

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
               +  R+L + +   ++   K  ++E T  +  I +PI+G I      S       ++
Sbjct: 259 TLRTDAQRELREIETQLSELTEKRFVIEDTLSRTAIRAPISGLINDMNVNSVGGVISPAE 318

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  IVP        A+V    I+ V  G+ A +RF  +      + +  +  +    + 
Sbjct: 319 ILATIVPEEAELVFTARVPAASIEQVDTGHAARMRFVAFDQNETPEIEGTVSYVAA--AA 376

Query: 377 QDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             +     ++Y + + +T    +     ELR G P EV  T    T    ++ P +D + 
Sbjct: 377 TSDPQMPGDFYSIKVDVTPDQLARLGGKELRPGMPVEVYVTTAERTALSYLVKPFSDQFA 436

Query: 436 KIFE 439
           + F+
Sbjct: 437 RAFK 440


>gi|269965323|ref|ZP_06179443.1| putative protein secretion protein [Vibrio alginolyticus 40B]
 gi|269829969|gb|EEZ84198.1| putative protein secretion protein [Vibrio alginolyticus 40B]
          Length = 446

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 73/428 (17%), Positives = 156/428 (36%), Gaps = 15/428 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +    +   + + GL  W+    +E +  + G++       EI+    GII+K  V+ 
Sbjct: 29  KPILLGVVTLSVFLGGLGYWAATAKLESAAIAYGDLSVLTKRQEIQHLEGGIIEKLYVQE 88

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           G  + +G  L+     +    +D               +  E   L  +    D+     
Sbjct: 89  GDLVEKGQLLIQLSKRQAMAKLDSLSGRFIHTLAKENRLSAELDELPTIVWSDDLESIPR 148

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               ++      K      + F+  +S + +S+      +        +L+    +    
Sbjct: 149 VDIVQEAQLVQNKIFEARKRFFDSKLSIIEQSISGANLELE-------NLQQTKVIETER 201

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+   +++   + L +K    ++ L Q +R+  +    L +   +   + + ++E   + 
Sbjct: 202 LNFIAEEIDSNQALVQKGFSGKSTLLQLKRLAAEVRSTLSQLDRQSLTVRKRLDENLAQI 261

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                  L EI  +L   +        +    +    + TI +PI+G +V  Q F+    
Sbjct: 262 EELKLERLNEIVEELRNTKTEIVAIREEYRSAQDIVARTTINAPISGRVVNMQVFTEKGV 321

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               + L+++VP      + A+V P+ I  V  G  A VR               +  I 
Sbjct: 322 IGSGETLLELVPQDDKLLVEARVNPQDIDLVNPGQQAHVRLTALNARTLAPLDGTVLTIS 381

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
                Q+N    +++Y   + I+    + +   L +G  AEVL  ++  T    +I PIT
Sbjct: 382 ADKLSQEN---QEDFYLARIAISPEDVTKH--RLTSGMNAEVLILSEPRTPLSYLIKPIT 436

Query: 432 DNWPKIFE 439
           ++  + F 
Sbjct: 437 ESMNRAFR 444


>gi|332289296|ref|YP_004420148.1| p-hydroxybenzoic acid efflux subunit AaeA [Gallibacterium anatis
           UMN179]
 gi|330432192|gb|AEC17251.1| p-hydroxybenzoic acid efflux subunit AaeA [Gallibacterium anatis
           UMN179]
          Length = 446

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 79/438 (18%), Positives = 146/438 (33%), Gaps = 64/438 (14%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +   L+         M  L    ++  + WS    IE      G I+       I+S 
Sbjct: 55  NDLNAALQVEKHTGSFAMIWLLGAFLVVFLIWSYFSKIEEVTRGQGTIIPNSREQIIQSL 114

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GI+ K  V  G  + +G  LL  +D  ++ ++   +  + NL       K+ +     
Sbjct: 115 DPGILDKMMVREGDLVEKGQVLLKLDDTRSSAILRETQAKVDNLEAITTRLKAEI----- 169

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                                   S  + VF   I    +  +M++ + +        LE
Sbjct: 170 ------------------------SGQTPVFPEKIPQEIKDREMEVYKAKKQA-----LE 200

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                LR   +    ++ + + +  K AVSQ +L + +R      L++ E  H       
Sbjct: 201 EAVKTLRDSKAYLDSEIALTEPMVAKGAVSQVELLRMKRSANDMALQISEREH------- 253

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                          Y+ +   +L + Q         L       E+  I +P+ G +  
Sbjct: 254 --------------KYITDAGNELVRVQGDLDQAKENLAARADPVERSLIRAPLKGIVKN 299

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +        Q +M+IVP      + A + PK + +++ G  A V+   Y       
Sbjct: 300 IRINTIGGVISAGQDIMEIVPVEDNLLVEAYINPKDVAYIRPGMKAVVKLTAYDYAIYGG 359

Query: 363 FKAIIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAEV 413
              I+  + P   Q               +Y V++K      +D N   + +  G  A V
Sbjct: 360 LDGIVTLLSPSTLQDKRQPSDLNLNPNNSFYRVLVKTNGSHLTDKNGHELPVLPGMIATV 419

Query: 414 LFTAKNTTLAQEIIHPIT 431
                  T+ Q +I PIT
Sbjct: 420 DIKTGEKTVFQYLIKPIT 437


>gi|149203392|ref|ZP_01880362.1| Type I secretion membrane fusion protein, HlyD [Roseovarius sp.
           TM1035]
 gi|149143225|gb|EDM31264.1| Type I secretion membrane fusion protein, HlyD [Roseovarius sp.
           TM1035]
          Length = 441

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 73/428 (17%), Positives = 160/428 (37%), Gaps = 15/428 (3%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            +    L+    + G+  W+    +  +V + G +  + N+ +++    GI++K  V  G
Sbjct: 23  RIILGVLMMFGLLGGVGAWAFNANLTGAVIALGTVKVDQNLKQVQHRDGGIVEKISVREG 82

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFE 132
            ++  G  +   +D ++   + +    +      R  +  ++     +     +     +
Sbjct: 83  DEVEAGQVMFRLDDAQSRAELSILSAQLDEAEVRRARLVADREGAAEVRFPKRL--SMSD 140

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            ++ +L+    + H+         I +     +     +  +    + L ++ S L   L
Sbjct: 141 PQQSELMSGELRLHAG-------NIVNRDNQREQLELGIAQVNDEIVALVSQRSALTDEL 193

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +  ++  + + NLFEK  +    +++ +R + +   +L E           I+E+     
Sbjct: 194 ALVEESHSRVVNLFEKGLIQMPRVDEAKRELVQMRGKLGELDANIARSRSRISEIEMRIL 253

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                   E  R+L   +    +   +LT ++    +  I +PI+G I     F+     
Sbjct: 254 SVDEVARNEAQRELTVVEARIQELSDRLTAVQDKLSRTEIRAPISGRINELSVFTEGGVI 313

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             ++ L  IVP S    I  ++    I  V    TA VRF  +      +    I  I P
Sbjct: 314 TPAEILATIVPASAELRIEVQLPTTAIDQVYLDQTARVRFSSFNHRTTPEILGTISHISP 373

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             +   +    + +Y   + I+   F+  N + L  G P EV  + +  T A     P+ 
Sbjct: 374 --ATTISASTGEPFYIGYVDISPEEFARLNGLALMPGMPTEVYLSTQEQTAAAYFARPLM 431

Query: 432 DNWPKIFE 439
           D + K F 
Sbjct: 432 DQFEKAFR 439


>gi|222147843|ref|YP_002548800.1| ABC transporter membrane spanning protein (bacteriocin)
           [Agrobacterium vitis S4]
 gi|221734831|gb|ACM35794.1| ABC transporter membrane spanning protein (bacteriocin)
           [Agrobacterium vitis S4]
          Length = 462

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 58/421 (13%), Positives = 145/421 (34%), Gaps = 12/421 (2%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
              + ++GL  WS L  I+ +V  SG +  E N   ++    GI++   V+ G  +  G 
Sbjct: 48  ALAVLVLGLGAWSALTTIQGAVVGSGTVEVETNRQVVQHQAGGIVQDLLVKEGDVVQPGQ 107

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            LL  ++      + + +  + +L      +  E+     ++   +++E+A         
Sbjct: 108 VLLRMDEKLDQSELTIIENQLFSLLGNAGRLTAEQDGKSEISFDPELVERAKTD------ 161

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             + +       +      +  + +     R          L  K + LR       ++L
Sbjct: 162 SHVREIIEGQRNLLQARQENRDKQVGQLQERKHQTAQQIEGLNAKLNALRQQRQLISEEL 221

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + + L        + +   +R   ++  E+  ++         I E+            
Sbjct: 222 AVQQKLLRDGLTQTSKVMTLQRSEVEADGEIASSMASIAESRAKIAEIEIAILNVSGELR 281

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++   DL   +   A+   K     +T  +  + +P  G +      +     + ++P++
Sbjct: 282 EQSITDLRNAEAQIAELRQKRVSSLETLGRTEVTAPTGGVVFGLTVHALRTVVKAAEPIL 341

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I+P +    I   + P +I  V  G  A + F  +   +       + ++   +   + 
Sbjct: 342 YIIPQNVGLVITTNLPPNEIDQVHVGQKADLVFAAFDRRQTPDIHGTVIEVSADVFNDEK 401

Query: 380 NLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                 +Y+  +K  +   +   ++++  G P E        +    +  P+   + K F
Sbjct: 402 T--GNSFYKAKIKPDEQEIARLGDVQVLPGMPVETFIQTTERSPFTYLTKPLASYFNKAF 459

Query: 439 E 439
            
Sbjct: 460 R 460


>gi|295690625|ref|YP_003594318.1| HlyD family type I secretion membrane fusion protein [Caulobacter
           segnis ATCC 21756]
 gi|295432528|gb|ADG11700.1| type I secretion membrane fusion protein, HlyD family [Caulobacter
           segnis ATCC 21756]
          Length = 435

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 67/439 (15%), Positives = 167/439 (38%), Gaps = 14/439 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     +    N+    +    +  + ++GL+  +  +P+  SV ++G +  E N   I+
Sbjct: 1   MKPPKIQRPTDNYKGVARVGYAIIGVMLLGLVV-AAFMPLSASVIANGVVSAEGNRKTIQ 59

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSAL 117
               G+++K  V  G ++  G  L   +  +      +   + V++K L   +  E+   
Sbjct: 60  HLEGGMLRKILVREGERVKAGQVLFELDPTQANAAAGITKNQYVALKALEARLVAERDQR 119

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             ++   D+L +  +         + +  +     F     ++   + +   +       
Sbjct: 120 ASISFPADLLSQRSDP-------MVARAIADEEVQFQERRQTIQGQVDLVNGQREQYQRE 172

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              ++ ++  L+  L   Q +L  ++ +++K  V +  L   ER     +  +     ++
Sbjct: 173 IEGIDRQTQGLKDQLGFIQDELGDLRKIYDKGLVPRPRLLALEREQASLSGSIGRLTADR 232

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              ++ I++   +       + +++S+ + + +   A+   K  +      +  ++SP++
Sbjct: 233 AKAVQGISDTQLKTRQIRQEFFEQVSQSITETRVKLAEVTEKELVASDALRRIKVVSPVS 292

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT    + F+     + ++PL+ I P  +   I+A   P  + ++  G T  VR P +  
Sbjct: 293 GTAQNLRFFTEGAVVRPAEPLVDIAPDDEAFIIQAHFAPTDVDNIYAGMTTEVRLPAFHS 352

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFT 416
                    IE I               Y+  I+ +           ++  G PA+V+  
Sbjct: 353 REIPILNGKIESISRDRLTDPEGKT--SYFLGIVTVDIKQLPKPMRAKVSAGMPAQVIVP 410

Query: 417 AKNTTLAQEIIHPITDNWP 435
            +  T+   +I P+ D   
Sbjct: 411 TRARTVLDYLISPLRDTLR 429


>gi|163740033|ref|ZP_02147437.1| putative toxin secretion transmembrane protein [Phaeobacter
           gallaeciensis BS107]
 gi|161386664|gb|EDQ11029.1| putative toxin secretion transmembrane protein [Phaeobacter
           gallaeciensis BS107]
          Length = 467

 Score =  288 bits (736), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 162/438 (36%), Gaps = 16/438 (3%)

Query: 8   NLKRNHPASLKRMTLLSII----GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            L R  P  ++++ +  ++       GL+ W+    +  +V + G+     + + ++   
Sbjct: 32  ALPRTPPTRVRQLVMWMLVCGFGLFGGLVFWATKAEMTSAVVAPGQFTVAGDRLSVQHLE 91

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
            GI+++  V  G  + +G  +   +      +  ++  +  S+   +  +  E +  D +
Sbjct: 92  GGIVREINVAEGDMVAEGDVIAVLDGRRMRASRAILTSQMASLLAQQARLQAELAEADQI 151

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               ++ +   E  +      L         VF    +     +++   R+  +      
Sbjct: 152 EVPAELDQLIAEDPQ------LVSLFEVQRDVFTSNRALYEGQVQILRDRISQLGKQLNG 205

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            + + + +   L+  + ++  +  L+EK  V +  L+ ++               + +N+
Sbjct: 206 RQARITAIEDQLTLIKGEVADLHKLYEKGLVPKTRLSDRQLQHTGLMGTFGALESDSENL 265

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              I E  +       + +  IS + +  Q    D   +L   E   E++TIL+P AG +
Sbjct: 266 QERIAETEERILQVHRDTVNRISSETQLVQERILDLRQRLDAAEDVLERQTILAPRAGRV 325

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V     +        Q ++++VP      +  +V+P  I  V  G  A V+   Y+    
Sbjct: 326 VELSINTLGQVLNPGQNVLELVPSGSDLIVETRVSPTDIDEVVTGGQARVQLTAYSFRST 385

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKN 419
              +  +  +        N      YY V ++I      +  N++   G PA+ +     
Sbjct: 386 PPVRGEVVMVAADSIADLN--SGIPYYRVHIRIPPEELAALPNVKTLPGMPAQAMIETGR 443

Query: 420 TTLAQEIIHPITDNWPKI 437
            TLA  ++ P+  +    
Sbjct: 444 QTLADYLLSPVLRSMSNA 461


>gi|304394381|ref|ZP_07376304.1| HlyD family secretion protein [Ahrensia sp. R2A130]
 gi|303293821|gb|EFL88198.1| HlyD family secretion protein [Ahrensia sp. R2A130]
          Length = 445

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 59/430 (13%), Positives = 142/430 (33%), Gaps = 16/430 (3%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P  +  +T L ++G  G   W+    I+ +V + G I        ++    G++++  V 
Sbjct: 26  PGIVAVVTSLCLLG--GSAAWAHYTRIQGAVIAVGTIAVSGKPRSVQHLDGGVVEEILVV 83

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +G  + +G  L+  +       + + +        L   ++ E   L  L         A
Sbjct: 84  DGDAVKKGALLMRLDPTVLEANLRIYRARYVNADALAARLNAEMLDLPKLAFNEIPSFLA 143

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             S +           +    +F           +    +++             +    
Sbjct: 144 NTSADGA--------RTGQVAIFEARTEMRAGRREQLREKIKQFGNQIDGTRQVIAAKEE 195

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L   +++L  + +L  +  V  + +   +R       +L E+  E   +   + +   E
Sbjct: 196 QLGYIERELKSVSSLKRQKLVRDSQVLAIQRSRADLFGQLGEHRSELARIANSVRDTELE 255

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              +     +E   +L     +  +   ++   ++  E+  I +P+AG +   Q  +   
Sbjct: 256 LIQQERQRRQEAVTELRDVTASLEELTQQIISTQRQLERIDIRAPVAGLVHEMQIVTIGG 315

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                  + +I+P         ++ P  +  V  G  A V    +      +    +  I
Sbjct: 316 VVPPGGTVAQIIPTDGGFTFDTRIDPASVDQVHVGQPARVTLTAFNQRTTPELNGSVRAI 375

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
            P           + +Y V +++ D   +  + +EL  G P       +  T+   +  P
Sbjct: 376 SPDTVADQ--ATGETFYRVRIQVPDRELAKISELELLPGMPVSAFLQTQERTVLSYLARP 433

Query: 430 ITDNWPKIFE 439
           ++D   + F 
Sbjct: 434 LSDQLDRAFR 443


>gi|91776787|ref|YP_546543.1| Type I secretion membrane fusion protein, HlyD [Methylobacillus
           flagellatus KT]
 gi|91710774|gb|ABE50702.1| Type I secretion membrane fusion protein, HlyD [Methylobacillus
           flagellatus KT]
          Length = 428

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 63/440 (14%), Positives = 153/440 (34%), Gaps = 23/440 (5%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W   + N     +   L+S+  +  LITW+ L  +++ V + G ++       ++    G
Sbjct: 3   WLRRQWNAMTPSRAFVLISVFAVAALITWAALAQVDLIVRTVGRVVPAGKAQIVQHLEGG 62

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNN 122
           I++   V+ G  +  G PL+   DI+    +  ++     LR     +  E      +  
Sbjct: 63  IVRTLLVQEGEIVKAGQPLIELSDIKARSDLGQERTKRDALRGREARLLAEARGKTSIEF 122

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             D+ +               +     S      +SSV    ++   +         ++E
Sbjct: 123 PADLHD--------------AEVKQAESAALRARLSSVNEESRVLRDQSAQRRGEIAEIE 168

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +   L + +   ++   +++ L +  A S+ +L   E  + +   +LRE       +  
Sbjct: 169 TRRKNLVSEIELARQQHALIEGLNKNGAASRMELLDAESRLQRLESQLREAEAALPRLKA 228

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              E+  +    +A +  + +  L   +        +        E+  + +P+AG I  
Sbjct: 229 AQAEIESKIAELWARFRADATAQLTDVRAELQRSTLEFETNADRLERNIVRAPMAGFINR 288

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +     +  +PL++I P  +   +  +  P    +++ G  A VR   +       
Sbjct: 289 MMLSTVGGVIRPGEPLLEITPEDEHIVVETRARPDDRANLRNGLPARVRIGAFDYATYGA 348

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILK---ITDLAFSDNNIELRNGFPAEVLFTAKN 419
               + ++       +       YY V +    I+++  + +   +  G           
Sbjct: 349 LPGKVTEVSADTLFDEREG---YYYRVRVDVGSISEIKLAKSAGPISPGMSVTADIVVGK 405

Query: 420 TTLAQEIIHPITDNWPKIFE 439
            T+   ++ P+     ++F 
Sbjct: 406 RTVLSYLLSPMMRFGDRVFR 425


>gi|24375634|ref|NP_719677.1| HlyD family secretion protein [Shewanella oneidensis MR-1]
 gi|24350540|gb|AAN57121.1|AE015846_3 HlyD family secretion protein [Shewanella oneidensis MR-1]
          Length = 441

 Score =  288 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 89/439 (20%), Positives = 174/439 (39%), Gaps = 16/439 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H F            +K++T      +  +  WS+   IE    + G+++   +   I+S
Sbjct: 14  HEFTQAIEAPAEKRIIKQITYFIAGSVFIMFVWSLFTNIEEIAKAKGQVIPLGHQQVIQS 73

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G +    V  G  + +G  L  F  I++    +  +    NL   I+   + ++   
Sbjct: 74  FSGGTLASILVSEGDLVKKGDVLANFIAIDSQAAAEELESKQANLVLKIERYSAFIESR- 132

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                 E  F S  E   + +  + S   ++ N   + +  S    L  +         L
Sbjct: 133 ------EANFASYLESHPNLVKGHISDLERMNNEKQAIIQSS----LAEIAKSKAELASL 182

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L+  ++S Q+ + MM+++ E  AVS+  + + ++ +     EL+    +Q+ + 
Sbjct: 183 DQEIPPLKHQITSAQQTINMMESIKESQAVSKLTMLESQQKLDSYIRELKSMEGKQQVLA 242

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R I  L  +   + A  LKE+       Q       ++L   +   +Q TI SP+ G I 
Sbjct: 243 RDIENLQRQLEQKQATLLKEVGEARTDAQAELLGITARLKSSDSQVQQNTITSPVDGIIQ 302

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              + SS +  Q    +  IVP +    + AK++P+ I  V  G  A ++   +   R  
Sbjct: 303 SIPNTSSGSVIQPGGTVAVIVPTTPTALLEAKLSPRDIGFVSVGQKARIKIDAFDYSRYG 362

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKN 419
               I+++I P     +   +   +Y+V + I    F D  + +EL  G   E      +
Sbjct: 363 ALDGIVKRISPSTDADE---KGGVFYKVQISIDKPYFGDQPDKLELIPGMTGEADIVTGD 419

Query: 420 TTLAQEIIHPITDNWPKIF 438
            T+ Q +  P+  N  + F
Sbjct: 420 KTVFQYLWKPVFTNVTEAF 438


>gi|296104320|ref|YP_003614466.1| HlyD family type I secretion membrane fusion protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058779|gb|ADF63517.1| HlyD family type I secretion membrane fusion protein [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 399

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 68/426 (15%), Positives = 142/426 (33%), Gaps = 61/426 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              +R+ +LS++  I L  W+    ++   + +G+++       ++S   GI+ +  V  
Sbjct: 25  TGARRIVILSLLLFIVLGIWAWFGVLDEVSTGTGKVIPSSREQVLQSLDGGILTELNVHE 84

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G Q+  G  L   +   +   +     S    R  + +       +N+       + +  
Sbjct: 85  GDQVQAGQVLARLDPTRSESNVGE---SAARYRASLASSARLYAEVNDLPLKFPPSLKEW 141

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            E + D    Y+S                              R  LE+    LRA L  
Sbjct: 142 PELIADETRLYNS-----------------------------RRAQLEDTQRELRAALDL 172

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             K+L + + L +  A S  ++ + +R      L+L +   +                  
Sbjct: 173 ANKELAITQRLVKTGAASHVEVLRLQRQKSDLELKLTDVRSQ------------------ 214

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              Y  +    L +         + L   + +  + T+ SP+ G +   +  +       
Sbjct: 215 ---YYVQAREALSKANAEVDMVSAILKGRQDSVTRLTVKSPVRGIVKNIKVTTIGGVIPP 271

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           +  LM+IVP      I  +++P+ I  +     A V+   Y          ++E I P  
Sbjct: 272 NGELMEIVPVDDHLLIETRLSPRDIAFIHPNQEALVKITAYDYAIYGGLHGVVETISPDT 331

Query: 375 SQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            Q +   +   YY V ++ +       +  +  +  G  A V       T+   +I P  
Sbjct: 332 IQDEAKPEV-FYYRVFIRTSQDYLVNKAGRHFSIVPGMIATVDIKTGEKTVLDYMIKP-- 388

Query: 432 DNWPKI 437
             + + 
Sbjct: 389 --FNRA 392


>gi|240137642|ref|YP_002962113.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens AM1]
 gi|240007610|gb|ACS38836.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens AM1]
          Length = 458

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 69/420 (16%), Positives = 163/420 (38%), Gaps = 13/420 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L          W+  + ++ +V S+G I+ E +   ++    G+++   V++G  +  G 
Sbjct: 45  LIAAAFGVAGAWAATVRLDRAVISTGVIVAETSRKVVQHFEGGMVQAVLVKDGQTVRSGD 104

Query: 83  PLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            LL  + +++    DL +  +     L   +  E++  D L    D+  +  E       
Sbjct: 105 VLLRIDPLQSQASADLFRNQLDAALVLEARLRAEQAQSDDLQLPADIAARRNEP------ 158

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             L +     +       +++   L +   ++  +      L  + S +   +   +++L
Sbjct: 159 -VLARMIGDQAGQLAERRTTLKGQLALIEAKVTQLRTEISGLAVEKSSVEQQVGFIRQEL 217

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +++L E+N +  + L   ER   +    +  ++ E+      I+E   +         
Sbjct: 218 EGLRSLHERNLIPLSRLLVMERERTRLEGVIGRSVAERAKAENAISEAGLQVTQLKQKLQ 277

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           + ++  L + ++   +   KL + +    +  I +   G I   + F+     +  +PLM
Sbjct: 278 EAVTGQLLETRQRIGELREKLVVAQDVFRRHEIRASHDGVIQGLKVFAIGQVVRSGEPLM 337

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +IVP +    +  + +P  ++ V  G  A ++FP +   R       +  +       + 
Sbjct: 338 EIVPTADRLVVNVQFSPNDLEAVHAGMRAEIKFPTFQARRTPAVFGTLTVVSRDRLVDEG 397

Query: 380 NLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               Q Y+   ++I +    ++    L  G PAEV+ +A   T  + +  P  D   + F
Sbjct: 398 --SKQAYFAGTVEIDEHQLPAEVRHRLLAGLPAEVVVSAGERTALEYLFAPFFDAMGRAF 455


>gi|163747673|ref|ZP_02155018.1| Type I secretion membrane fusion protein, HlyD [Oceanibulbus
           indolifex HEL-45]
 gi|161379042|gb|EDQ03466.1| Type I secretion membrane fusion protein, HlyD [Oceanibulbus
           indolifex HEL-45]
          Length = 442

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 71/420 (16%), Positives = 157/420 (37%), Gaps = 13/420 (3%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           ++  I    L TW+    I  +V + G +  E +   ++    GI++   V   + + QG
Sbjct: 28  VILFITFGILGTWAYFAIIASAVVAPGVVSLESDRKVVQHLEGGIVQDILVREAAFVEQG 87

Query: 82  TPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            PLL  ++I+       ++ ++ + + L   +  E++  + +    D+L           
Sbjct: 88  DPLLVLDNIQINSEIRVLEQRRAASEALIARLVAEQAFDEEIEFSPDLLNAEDP------ 141

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
             ++         +F    S      ++   R   +       E + + +    +   + 
Sbjct: 142 --YVKSAVQAQRNIFEDRRSIFLSQTEILEFRAEQLNSQAEGYEVQLAAVERRHTLRNEL 199

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              M+   E+  +  N L++ +  V +    +   + +   +     E           Y
Sbjct: 200 FERMRTGEERGVIESNRLSEMQDEVIQIEASIGTAMSDIAQVKAAAGEAQLNILKLKQEY 259

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            +  + +L+  +   ++   KLT+      + TIL+P  G +      +  +  +  + L
Sbjct: 260 SERANSELKTARSELSEINEKLTVAADQMRRTTILAPTTGKVQSLAVTTRGSVIRSGEIL 319

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M+IVP  +   I AK+ P  + +V+ G    VRF  +     K     +  I   +    
Sbjct: 320 MEIVPSDETLLIDAKIAPVDVDNVRPGLETEVRFSAFKARLSKVVLGEVLSISTDVV-TT 378

Query: 379 NNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
            +     YY   +K+ D   +D     L  G PA+V+      T+ Q ++ P+++   K 
Sbjct: 379 QDPNEAPYYLARIKVPDENLTDEIREGLTAGMPADVVILTGERTVLQYMLDPLSEAIFKS 438


>gi|56479508|ref|YP_161097.1| alkaline protease secretion protein [Aromatoleum aromaticum EbN1]
 gi|56315551|emb|CAI10196.1| probable alkaline protease secretion protein [Aromatoleum
           aromaticum EbN1]
          Length = 434

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 72/423 (17%), Positives = 154/423 (36%), Gaps = 15/423 (3%)

Query: 19  RMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R          G +  W     ++    + GE++    V  ++    GII+   V  G  
Sbjct: 23  RAFYAVAGCFFGFLLLWGFFAELDSGAIAEGEVIPAGRVKTVQHLEGGIIQAILVREGES 82

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  GT L+  ED E    + + +         +   ++  D    +      A  S   Q
Sbjct: 83  VRAGTELVRLEDTEARAQLGIAETDRAAQEALVQRLEAERDGRPYRPAPEVAAAPSVMAQ 142

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +            ++F     ++ +       R+  I       E K + L  L ++ ++
Sbjct: 143 V------------RLFESRQDALRKEEAGLNVRVDGIRRELQSWEGKGAALDELQANAEE 190

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +  + + LFEKN +S+  L Q +    +S + L EN  E     + + +          +
Sbjct: 191 ESRLNQRLFEKNFISRPRLLQLQGQQAESAVRLSENSAEIARSRQRLADTEVAIAKLKND 250

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           ++  +  +L + Q   A    ++T+      +K +++P  G +   +  +          
Sbjct: 251 WMSTLLEELRRAQEAAAAARERVTVARDRLARKRLVAPQDGIVNDLRYTTVGGVVPPGGA 310

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++ +VP ++   + A+V P  I  V+ G  A VR   Y           +  +     + 
Sbjct: 311 VLDVVPVAERLVVEARVLPDDIDVVRAGLEARVRLTAYKARSHLSLIGKVTHVSGSTFRD 370

Query: 378 DNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
           + + Q + +Y+  ++I            L  G  A+V   A   +  + +  PI D+  +
Sbjct: 371 E-HAQGRPFYKARVEIDAKELDKVERGLLIPGMLAQVEIVAGKRSAMRYLFDPIIDSMNR 429

Query: 437 IFE 439
            F+
Sbjct: 430 AFK 432


>gi|23011020|ref|ZP_00051514.1| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 376

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 59/383 (15%), Positives = 145/383 (37%), Gaps = 12/383 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV---S 102
           + G+++ E ++ +++ P  G++ +  V  G ++  G  L+  ++ +T   +D+       
Sbjct: 2   APGQLVVESDIKKVQHPTGGVVGQLLVREGQRVAAGDVLIRLDETQTRANLDIVLKAMDE 61

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   R   + E+  L  +    +++ +            + +     S++F   ++    
Sbjct: 62  LAARRARDEAERDGLKAVAFPPELVSRIDSD------ASVTRLIDGESRLFAARVAGREG 115

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
                  R+  +      L  +++     +     +LT +++L+ KN V  + +   ER 
Sbjct: 116 QKAQLRERVDQLRQEIAGLTKQAAAKDREIDLIGHELTGVRDLYAKNLVPLSRVTALERD 175

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
             +   E  + I    +    I E   +          E+ +DL + +  +++   K   
Sbjct: 176 AARLEGERGQLIASTASARGKIAETELQIFQIDQEMRTEVGKDLAEIRGKWSELREKRVA 235

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            E   ++  + +P  G +      +       S+P M IVP +    +  +V P+ I +V
Sbjct: 236 AEDQLKRVELRAPQDGYVHQMTVHTVGGLVVPSEPAMLIVPAADQLLVEVRVQPQDIDNV 295

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-N 401
           + G  A +RF  +      +    + ++   ++Q       Q +Y   ++I+D       
Sbjct: 296 RVGQKAVLRFSAFNTRTTPEIDGEVVRVSADVTQD--PKTGQSFYTARIRISDENKDRLK 353

Query: 402 NIELRNGFPAEVLFTAKNTTLAQ 424
            + L  G P E        ++  
Sbjct: 354 GLRLVPGMPVESYTQIGERSVLS 376


>gi|260463992|ref|ZP_05812187.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium opportunistum WSM2075]
 gi|259030163|gb|EEW31444.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium opportunistum WSM2075]
          Length = 439

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 72/433 (16%), Positives = 156/433 (36%), Gaps = 13/433 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           + +             + +     W++  P+  +V + G I      + I+ P  GII++
Sbjct: 13  RTDIRRVASAGYAAIALLVGCFGYWAVTAPLSGAVITQGTISATGGNILIQHPEGGIIQE 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDV 126
             V  G ++ Q   L+  +       ++        LR     ++ E+  LD L    + 
Sbjct: 73  LLVHEGDRVQQAQDLIVLDPTAARAELNRLTRQSIALRASAARLEAERDGLDRLAPITET 132

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
               F+   E L++          K F+  ++       + + R+     + + L+ +  
Sbjct: 133 APAPFQRDFETLVE-------EQQKEFDARLARFRSEQSILVQRVAMHRQSVVGLQAQKQ 185

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            ++      +K+L +   L ++   ++++ +Q  R       +              I E
Sbjct: 186 AIQQQADVVKKELGIKTGLLDRGLTNRSEYSQLLRSEADLVGQAGALEAYLATANTQIVE 245

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++        ++E    L+  +   AD   ++   E    + TI +P AG +V +   
Sbjct: 246 AQEQTEHLATQRVEEALTKLDDVRSNLADIEEQIRAAEAVLRRTTIKAPAAGIVVSSTYN 305

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S  +     + +M+I+P +    + A++ P  I  V+ G  A +R          +  A 
Sbjct: 306 SKGSVVAPGEKIMEILPTAPGLVVDARLRPNDIDQVRVGQPAKLRLSALNTRLTPEVSAT 365

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           + +I             + Y+   LKI     S     +L  G P E      + T  Q 
Sbjct: 366 VTQISADRLIDQATH--EPYFRARLKIAAALPSGVKPEQLYPGTPVEAFINTGDRTFFQY 423

Query: 426 IIHPITDNWPKIF 438
           +  P+ D++ + F
Sbjct: 424 LARPMLDSFARAF 436


>gi|328544466|ref|YP_004304575.1| toxin/protease secretion system [polymorphum gilvum SL003B-26A1]
 gi|326414208|gb|ADZ71271.1| Putative toxin/protease secretion system [Polymorphum gilvum
           SL003B-26A1]
          Length = 444

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 71/408 (17%), Positives = 140/408 (34%), Gaps = 10/408 (2%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ +  I  +V ++G ++ E NV  ++    GI+++  V +G  +  G  LL  +D  T 
Sbjct: 39  WAAVTEIAGAVVATGTLVVETNVKAVQHQEGGIVRQIAVRDGDLVEAGDLLLRLDDTVTR 98

Query: 94  DLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + +   +   +      +  E+     +        +    +   L   L     +  
Sbjct: 99  ANLAIVTRQLADLAAQEARLVAERDGRAEIVFG----ARPQGLQAADLAADLADVERSQV 154

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++     +S     K    ++R        LE +       +     +L  +  L +K  
Sbjct: 155 ELLEARRASRTGRKKQLEEQIRQFDKQVEGLEAQRLAKGREIELIDDELADLIGLLDKKL 214

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++N +   +R   +   +    I +       I+E              E+   L+  +
Sbjct: 215 VARNRVTALQRDKARLEGDYGSLIAQIAQSREAISERRLLILQIDDEARAEVLEQLQDVR 274

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A    +    E    +  I +P AG +      +        + +M IVP   L  +
Sbjct: 275 GRLARLEEQRIAAEDQLARIDIRAPRAGYVHQLAVHTIGGVVGAGETVMLIVPREDLLVV 334

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            AKV P  I  +  G  ATVRFP +      +  A +  +   ++          YY   
Sbjct: 335 EAKVQPVDIDQLAPGRDATVRFPSFDQRTTPELAARLVTVAADLTVDPATGAG--YYAAR 392

Query: 391 LKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           L I D   +  +   L  G P E+    +  T+   ++ P+ D     
Sbjct: 393 LAIPDAELARLDGQTLVPGMPVEIFIRTRERTVLSYLVKPVADQIAHA 440


>gi|158424951|ref|YP_001526243.1| membrane fusion protein [Azorhizobium caulinodans ORS 571]
 gi|158331840|dbj|BAF89325.1| membrane fusion protein [Azorhizobium caulinodans ORS 571]
          Length = 472

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 79/432 (18%), Positives = 164/432 (37%), Gaps = 22/432 (5%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            +   TL  +IG  G  TW++L  ++ +  ++G ++ +     +     GI+K+  V+ G
Sbjct: 53  PVIAGTLAVLIGFGGFTTWALLANLDSAAVATGTLVVDSKRKTVSHLEGGILKRLLVQEG 112

Query: 76  SQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             +  G P+   +D      ++    ++V        +  E+S    ++    VL+ A  
Sbjct: 113 DVVKLGQPVALMDDTRARSDLEQYRGRRVGFLAKLARLRAEQSGATQVDFPPPVLDPANP 172

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              + L        S   ++F     +     +++   +         L           
Sbjct: 173 VAVDVL--------SAERRLFQRRHDAYVGKTQIQRKEIEQRIAEAQSLSALIESAERQR 224

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
               + LT +K L  K  V++  L +QE  V     EL+  + + +  +    +    A 
Sbjct: 225 DYISERLTGLKELAGKGFVAKAQLLEQEARVS----ELKGRVGDYRAQIAKSEQAKASAE 280

Query: 253 LEFA----NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
              A    ++  +++  L+  Q   A+  +++T  +   ++ T+ +P  G I   Q  + 
Sbjct: 281 ATLASIDLDWQSDVATQLQDAQLQLAEVENQITSAKDVLDRLTVRAPQDGVIANIQFRTP 340

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +     QP+M +VP  +   + AK+  ++I +V  G  A VR   Y           I 
Sbjct: 341 GSAIPAGQPIMDVVPEKEQLVVEAKLGTREIVNVHVGGKAQVRLTAYDHRVIPPVDGKII 400

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN-IELRNGFPAEVLFTAKNTTLAQEII 427
            +     Q  +      YY +   I       +  + L  G PAE++   K       +I
Sbjct: 401 YVAAD--QTIDPNSQNAYYVIRASIDAAELEKHPTVSLYPGMPAELMAVRKPRRAIDYLI 458

Query: 428 HPITDNWPKIFE 439
            P+T+++ + F 
Sbjct: 459 GPVTESFNRAFR 470


>gi|37676046|ref|NP_936442.1| membrane-fusion protein [Vibrio vulnificus YJ016]
 gi|37200586|dbj|BAC96412.1| membrane-fusion protein [Vibrio vulnificus YJ016]
          Length = 446

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 67/431 (15%), Positives = 169/431 (39%), Gaps = 15/431 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N    +    L   +   G+  W+    +E +  + G++        I+    GI+++  
Sbjct: 26  NIKGPIVMGFLSIALFGGGIGYWAATAKLESAAIAYGDLSVSSQRQAIQHLEGGIVERLM 85

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           ++ G  + +G  L+   + ++   ++  K   V        +  E +    +  + D+ +
Sbjct: 86  IQEGDYVEKGQLLIQLSEQQSLSRLESLKGKFVHAVAKESRLKAEFNNTSEIVWESDLEK 145

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            A  +   +      K     ++ F   ++ V++++           L   +L+    + 
Sbjct: 146 MAISNTLLEAQQIQKKIFEARARYFESKLNIVHQTISGA-------KLELNNLKQTKKIE 198

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  LS  ++++   + L ++    ++ L Q +R+  +    L +   +   + + I+E  
Sbjct: 199 RERLSLIEEEILSNQTLVKQGFSGKSTLLQLKRLATEVRSTLSQLDRQTLTVQKRIDENQ 258

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                     + E+  +L + Q        +  + +   ++  I +PI+G +V  + F+ 
Sbjct: 259 SRLEEMALERINEVVVELREAQNEIVSIREEYRVAQDIYKRTGIRAPISGKVVNMKVFTE 318

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +  + L+++VP      + A+V+P+ I  +  G  A VR        ++     + 
Sbjct: 319 QGVIRSGETLLELVPDDDSLIVEARVSPQDIDLISPGLDARVRLTALNARIQEPLNGKVL 378

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +      + N    ++YY   + + D     +  +L  G  AEVL  ++  T    ++ 
Sbjct: 379 TVSADKLSEQNK---EDYYLARIALNDQDAQQH--QLTAGMNAEVLILSRPRTPISYLLK 433

Query: 429 PITDNWPKIFE 439
           PIT+++ + F 
Sbjct: 434 PITESFNRAFR 444


>gi|254560213|ref|YP_003067308.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens DM4]
 gi|254267491|emb|CAX23332.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens DM4]
          Length = 458

 Score =  287 bits (734), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 69/420 (16%), Positives = 161/420 (38%), Gaps = 13/420 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L          W+  + ++ +V S+G I+ E +   ++    G+++   V++G  +  G 
Sbjct: 45  LIAAAFGVAGGWAATVRLDRAVISTGVIVAETSRKVVQHFEGGMVQAVLVKDGQTVRSGD 104

Query: 83  PLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            LL  + +++    DL +  +     L   +  E++  D L    D+  +  E       
Sbjct: 105 ILLRIDPLQSQASADLFRNQLDAALVLEARLRAEQAQSDDLQLPADIAARRNEP------ 158

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             L +     +       +++   L +   ++  +      L  + S +   +   +++L
Sbjct: 159 -ALARMIGDQAGQLAERRTTLKGQLALIEAKVTQLRTEISGLAVEKSSVEQQVGFIRQEL 217

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +++L E+N +  + L   ER   +    +  ++ E+      I+E   +         
Sbjct: 218 EGLRSLHERNLIPLSRLLVMERERTRLEGVIGRSVAERAKAENAISEAGLQVTQLKQKLQ 277

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           + ++  L + ++   +   KL + +    +  I +   G I   + F+     +  +PLM
Sbjct: 278 EAVTGQLLETRQRIGELREKLVVAQDVFRRHEIRASHDGVIQGLKVFAIGQVVRSGEPLM 337

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +IVP +    +  + +P  ++ V  G  A ++FP +   R       +  +       + 
Sbjct: 338 EIVPTADRLVVNVQFSPNDLEAVHAGMRAEIKFPTFQARRTPAVFGTLTVVSRDRLVDEG 397

Query: 380 NLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               Q Y+   ++I +          L  G PAEV+ +A   T  + +  P  D   + F
Sbjct: 398 --SKQAYFAGTVEIDEHQLPTEVRHRLLAGLPAEVVVSAGERTALEYLFAPFFDAMGRAF 455


>gi|239995140|ref|ZP_04715664.1| HlyD family secretion protein [Alteromonas macleodii ATCC 27126]
          Length = 455

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 149/398 (37%), Gaps = 14/398 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WS    I+      G+++    +  ++S   GI++   V  G  +  G  LL  +     
Sbjct: 62  WSYFAEIDEVAKGDGKVIPSQQLQVLQSYDGGIVQDILVREGQTVKAGQVLLKVDPTRFL 121

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             ++        L   +    +       + DVL    E RE+              K++
Sbjct: 122 SSLEENTTQFAALAAKVQRLSAL-----TQGDVLRFNRELREQA-----PTIVDNERKLY 171

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           N  ++ +        +R+     +  +     S  + +LS  +K+L + K L    AVS+
Sbjct: 172 NSNLAELDEVAAGSDSRIMQRRQDVEEERANLSQYQNVLSLSKKELAVTKPLLASGAVSE 231

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++ + ER + +    + ++    +  L  I E   +        +   +++L +     
Sbjct: 232 IEILRLERQIVELEGNITKSKVAIERGLNAIEEEIIKKEEARLKLVNRWNQELTEATAEM 291

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A      T LE    Q  + SPI GT+      +          ++++VP      + AK
Sbjct: 292 ATLQQSQTSLEDVVSQAALRSPINGTVQRLLINTIGGVITPGSAVVELVPQDDQLIVEAK 351

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V+PK I  +++G  A ++F  Y         A ++ I       + +   + YY V L+ 
Sbjct: 352 VSPKDIAFIREGQQAILKFSAYDFTIYGGMSAEVQHISADAITNEKD---ETYYLVRLE- 407

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           T  + +D  +++  G   +V       T+   I+ P+ 
Sbjct: 408 TKKSIADEALDILPGMIVQVDILTGKKTVLNYILSPLF 445


>gi|307303507|ref|ZP_07583261.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
 gi|306902898|gb|EFN33490.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
          Length = 473

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 65/436 (14%), Positives = 157/436 (36%), Gaps = 19/436 (4%)

Query: 12  NHPASLKRMTLL----SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N  + ++R+ +      ++   G   W+    +  +  +SG I+ +     I     G++
Sbjct: 47  NTHSPIRRLVIAGLTTILVAFGGFFGWAFSTELSSASVTSGTIVVDSKRKTISHFEGGVL 106

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNKY 124
            +  V+ G  +  G PL+  ED      +     ++V +      +  E++ L  ++   
Sbjct: 107 GRILVQEGDHVAPGQPLMKLEDTRARSDLQALQSRRVGLIAKLARLRAERAGLHAVSFPA 166

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D++ +          +      +     F     +    L ++   +         L  +
Sbjct: 167 DLISEG---------EAAADAVTAEKAFFEKRSEAKESRLAIQRKTIEEYSEKAKSLTAQ 217

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  +    +  T +  L EK    ++ L + +  + +      E   ++    + +
Sbjct: 218 LQATDRQIELMNEQRTAIATLVEKAFAQRSKLIEIDARLSELAATRGELAGDKAQAEKAM 277

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                      +++  EI+ ++   +   A+   ++   E    +  I +P AG +   Q
Sbjct: 278 AGAELALIGIESDFQSEIAGEITTARLELAEVEQRIAAAEDVLRRLEIRAPQAGIVANIQ 337

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +  +     QPL+ IVP  +   +   V+ + I  +  G +  +R   Y        +
Sbjct: 338 LRTPGSAVTPGQPLLDIVPEDEPLLVEMHVSTRDIDSITIGSSTQIRLTAYNQRSHLPLE 397

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTLA 423
             +  I     Q  +      Y+    ++   + + N +I L  G PAEVL   K+ +  
Sbjct: 398 GKVTYIAAD--QSVDEKSNVAYFVARAEVAPESLAANPDIRLYPGMPAEVLIVHKSRSAI 455

Query: 424 QEIIHPITDNWPKIFE 439
             ++ P++D++ + F 
Sbjct: 456 DYLVAPVSDSFNRAFR 471


>gi|27367919|ref|NP_763446.1| membrane-fusion protein [Vibrio vulnificus CMCP6]
 gi|27359492|gb|AAO08436.1|AE016813_188 Membrane-fusion protein [Vibrio vulnificus CMCP6]
          Length = 446

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 67/431 (15%), Positives = 169/431 (39%), Gaps = 15/431 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N    +    L   +   G+  W+    +E +  + G++        I+    GI+++  
Sbjct: 26  NIKGPIVMGFLSIALFGGGIGYWAATAKLESAAIAYGDLSVSSQRQAIQHLEGGIVERLM 85

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           ++ G  + +G  L+   + ++   ++  K   V        +  E +    +  + D+ +
Sbjct: 86  IQEGDYVEKGQLLIQLSEQQSLSRLESLKGRFVHAVAKESRLKAEFNNTSEIVWESDLEK 145

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            A  +   +      K     ++ F   ++ V++++           L   +L+    + 
Sbjct: 146 MAISNTLLEAQQIQKKIFEARARYFESKLNIVHQTISGA-------KLELNNLKQTKKIE 198

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  LS  ++++   + L ++    ++ L Q +R+  +    L +   +   + + I+E  
Sbjct: 199 RERLSLIEEEILSNQTLVKQGFSGKSTLLQLKRLATEVRSTLSQLDRQTLTVQKRIDENQ 258

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                     + E+  +L + Q        +  + +   ++  I +PI+G +V  + F+ 
Sbjct: 259 SRLEEMALERINEVVVELREAQNEIVSIREEYRVAQDIYKRTGIRAPISGKVVNMKVFTE 318

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +  + L+++VP      + A+V+P+ I  +  G  A VR        ++     + 
Sbjct: 319 QGVIRSGETLLELVPDDDSLIVEARVSPQDIDLISPGLDARVRLTALNARIQEPLNGKVL 378

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +      + N    ++YY   + + D     +  +L  G  AEVL  ++  T    ++ 
Sbjct: 379 TVSADKLSEQNK---EDYYLARIALNDQDAQQH--QLTAGMNAEVLILSRPRTPISYLLK 433

Query: 429 PITDNWPKIFE 439
           PIT+++ + F 
Sbjct: 434 PITESFNRAFR 444


>gi|256829661|ref|YP_003158389.1| HlyD family type I secretion membrane fusion protein
           [Desulfomicrobium baculatum DSM 4028]
 gi|256578837|gb|ACU89973.1| type I secretion membrane fusion protein, HlyD family
           [Desulfomicrobium baculatum DSM 4028]
          Length = 430

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 67/437 (15%), Positives = 161/437 (36%), Gaps = 20/437 (4%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++ R    +   + ++  +     I W+   P++  V   G+I+    +  I++   GI
Sbjct: 4   DDMTRRSRITHNLLLIVIAMFFTAAIAWAAHAPLDEVVRGMGKIIPSTEIKRIQNFEGGI 63

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNK 123
           +K+  V  G ++ +  PL+  +  + T     ++ +  +       ++ E +  D +   
Sbjct: 64  VKEILVREGEEVTKNQPLILLDQTQMTSRFREQQSNYLDQTLAIARLEAELAGKDTIVFP 123

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                        ++ D         +++     ++   +L +     +       +L++
Sbjct: 124 ------------AEVQDQKPHLLKNQTELLRSRAANRQAALSVLEFDRQQRLQELKELKS 171

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + S L++  +  +K++ M + +  K A S+ DL + +R + +   ++ +       +   
Sbjct: 172 RLSYLQSNHALLKKEVDMTRAMVSKGAASEMDLLRSQRQLMELAGQIADARIAIPKVNAT 231

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +           +N+  EI ++L   +         L  LE    + T+ SP+ GT+   
Sbjct: 232 LEAAAHRIEEGESNHRTEILQELNTIRTEMEGRKETLPALEDQVNRTTVRSPVDGTVQRV 291

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +          +++IVP      + AKV P+ I  +  G  A V+   Y        
Sbjct: 292 FVTTIGEAVAPGMEMLEIVPREDTLLVEAKVVPEDIAFLHPGQNADVKITAYDFSIYGSM 351

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNT 420
              +E I       +       YY + ++    + +  N   + +  G  A+V       
Sbjct: 352 TGKVEHISADAITDEQKKL--SYYLIKVRTDSASLTSKNGKELPIIPGMVAQVDVLTGKK 409

Query: 421 TLAQEIIHPITDNWPKI 437
           T+ + I++PI       
Sbjct: 410 TVLEYIVNPIIKTARGA 426


>gi|320158189|ref|YP_004190567.1| membrane-fusion protein [Vibrio vulnificus MO6-24/O]
 gi|319933501|gb|ADV88364.1| membrane-fusion protein [Vibrio vulnificus MO6-24/O]
          Length = 446

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 67/431 (15%), Positives = 169/431 (39%), Gaps = 15/431 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N    +    L   +   G+  W+    +E +  + G++        I+    GI+++  
Sbjct: 26  NIKGPIVMGFLSIALFGGGIGYWAATAKLESAAIAYGDLSVSSQRQAIQHLEGGIVERLM 85

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           ++ G  + +G  L+   + ++   ++  K   V        +  E +    +  + D+ +
Sbjct: 86  IQEGDYVEKGQLLIQLSEQQSLSRLESLKGRFVHAVAKESRLKAEFNNTSEIVWESDLEK 145

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            A  +   +      K     ++ F   ++ V++++           L   +L+    + 
Sbjct: 146 MAISNTLLEAQQIQKKIFEARARYFESKLNIVHQTISGA-------KLELNNLKQTKKIE 198

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  LS  ++++   + L ++    ++ L Q +R+  +    L +   +   + + I+E  
Sbjct: 199 RERLSLIEEEILSNQTLVKQGFSGKSTLLQLKRLATEVRSTLSQLDRQTLTVQKRIDENQ 258

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                     + E+  +L + Q        +  + +   ++  I +PI+G +V  + F+ 
Sbjct: 259 SRLEEMALERINEVVVELREAQNEIVSIREEYRVAQDIYKRTGIRAPISGKVVNMKVFTE 318

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +  + L+++VP      + A+V+P+ I  +  G  A VR        ++     + 
Sbjct: 319 QGVIRSGETLLELVPDDDSLIVEARVSPQDIDLISPGLDARVRLTALNARIQEPLNGKVL 378

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +      + N    ++YY   + + D     +  +L  G  AEVL  ++  T    ++ 
Sbjct: 379 TVSADKLSEQNK---EDYYLARIALNDQDAQQH--QLTAGMNAEVLILSRPRTPISYLLK 433

Query: 429 PITDNWPKIFE 439
           PIT+++ + F 
Sbjct: 434 PITESFNRAFR 444


>gi|323495796|ref|ZP_08100866.1| ABC transporter: Membrane fusion protein [Vibrio sinaloensis DSM
           21326]
 gi|323319263|gb|EGA72204.1| ABC transporter: Membrane fusion protein [Vibrio sinaloensis DSM
           21326]
          Length = 437

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 74/440 (16%), Positives = 173/440 (39%), Gaps = 16/440 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           + H+      +N   SL  +T    + +   +TWS++  ++    + G ++ E     ++
Sbjct: 9   VKHYGELVESKNTARSLMMVTWSVALCVAIFVTWSVVTQVDEIAKAKGAVIPEGEKQVLQ 68

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   G +K+  V+ G  + +G PL+ F+          ++ +++ L     T + +++ +
Sbjct: 69  SDIGGKLKRILVKEGQFVEKGQPLVEFDAT-------FQQTALEELTAQQVTLRMSIERM 121

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           N   D  E  F   E +  D + +  +      N      Y+   +       I      
Sbjct: 122 NALLDNREPNFGEFEIEFPDIVSQQKAQ----LNAQKGLFYQKRIVLEKDSEQIAEQLRA 177

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +E         L++ + +L +++  ++   +S+  + +  + +     ++ E   ++  +
Sbjct: 178 VEKSLPSYDKELNATKLELNILEKGYKAGNISRLRVLEMRQKLASIEQKIEEARGKKSVL 237

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           ++  +    +     A    ++S D  +     +   +++   +       ++SP+ G +
Sbjct: 238 IKQADSNEQKIEQLLAEAKAKVSDDRSKAVSDLSALNARVRSSQAKLTNTMLVSPLQGLV 297

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
               S  +    Q    +++IVP       +A+++P+ I  V  G    ++   +   R 
Sbjct: 298 QSLPSTQNGGVIQPGGTVVEIVPVGGKADFKARLSPRDIGFVNVGQPTRIKIDAFDYSRF 357

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAK 418
              K  +E I P  SQ +     + YYEV++ +    F DN  +  +  G   EV  T  
Sbjct: 358 GALKGEVESISPTTSQSER---GEIYYEVVVSVETPYFRDNPESFSILPGMTGEVDITTG 414

Query: 419 NTTLAQEIIHPITDNWPKIF 438
             ++ Q +  PI  N    F
Sbjct: 415 EKSVFQYLWKPIYTNISVAF 434


>gi|254474077|ref|ZP_05087469.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
 gi|211956773|gb|EEA91981.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
          Length = 400

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 58/404 (14%), Positives = 154/404 (38%), Gaps = 12/404 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID--- 97
             +V +SG  +       ++    GIIK+  V+ G  +  G  L+  ++      ++   
Sbjct: 2   AGAVVASGSFVATGQNKIVQHFEGGIIKEILVKEGDVVSAGDVLVKLDETAAEANLERLV 61

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           +++  ++ ++  +  E      L     +   A + + + ++          ++     I
Sbjct: 62  IRQARLQAIQARLTQEAKGHKTLVLPEMLTSTAHDPKIKSIILNQSLTFKARTRKLQSEI 121

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
             + + +     R++         +++   ++  +   Q++L   K +  K  + ++D+ 
Sbjct: 122 DILAQGIDALKERIQGG-------QSQLVAVKQQMELFQEELDAKKKILGKGLIRKSDVL 174

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + ER +     E    + E  +    I     +         +    +L+       D  
Sbjct: 175 RIERSLANLKGEEGRILAEIGDATERIARARAQIVKVENEASQTAVGELQVVNADLDDVS 234

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
            ++   +   ++  I++P+ G +V  +  ++    +  + LM+I+P      I A +   
Sbjct: 235 EQIRAAQDVLQRVEIVAPVRGIVVRMRYHTAGGVVESGKDLMEILPLQDELIIEASIQTT 294

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYYEVILKITDL 396
           +I +VK+G  A VR             A +  +     + ++ + +  + Y+  +++   
Sbjct: 295 EIDNVKEGQKAMVRLTALNQRITPMLDAKVIYVSADALRNEDPMSSMGDVYKARVQLDRE 354

Query: 397 AFSDN-NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
               + N +   G PAEV  T ++ T    ++ P+ D+  + F 
Sbjct: 355 KIPGHLNFKATPGMPAEVYITTRDRTFFDYLMEPVRDSMARAFR 398


>gi|154245456|ref|YP_001416414.1| HlyD family type I secretion membrane fusion protein [Xanthobacter
           autotrophicus Py2]
 gi|154159541|gb|ABS66757.1| type I secretion membrane fusion protein, HlyD family [Xanthobacter
           autotrophicus Py2]
          Length = 471

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 70/433 (16%), Positives = 163/433 (37%), Gaps = 15/433 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           ++ A  +    +     +G+  W+ L  ++ +V + G +  E     ++    GI+ +  
Sbjct: 45  DYNAMARIGYAVIAFTFLGVSGWAALARVDSAVIAPGVVAVESKRQVVQHLEGGIVAEIL 104

Query: 72  VENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           V+ G ++++   L   +  ++    D    +  +   L   +  E+   + +    D+L 
Sbjct: 105 VKEGEEVVKDQVLFRLDPTQSKASDDAALAQLRAALALEARLIAERDEREQIVFPDDLLA 164

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            A +      +             F      +    +     +  +   RL  E +    
Sbjct: 165 NAGQPVVRDAMADQLTQFRDRRAAFKSQTGILENRAEQSGHEIEGLTQERLSAEQQ---- 220

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L     +L  ++ L +K  V+++ ++Q ER   +    +  N  +   +   I EL 
Sbjct: 221 ---LMFIDDELDSLRQLEQKRLVNKSRVSQIEREKARLEGVVGRNTADTAKVRGSIGELT 277

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN--QSF 306
            + +       ++I + L + ++  A+   K+ +      +  I +P +GT+     +++
Sbjct: 278 MQVSQLRQQRAEDIGKQLLEVRQRIAELTEKVRVTRNVLGRIDIRAPRSGTVQNINARAY 337

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +    A+    L++IVP  +   + A+V  + I  +KK     VRFP + D         
Sbjct: 338 TVGAVARAGDTLLEIVPLDEPLVVDAQVPVQDIDRLKKDDAVEVRFPAFHDRTTPMVMGR 397

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTLAQE 425
           ++ +       +     Q Y+   + + +          L  G  AEV F     ++   
Sbjct: 398 LKTVSRDRLVDETTH--QPYFLARVAVAETDIPPALKQRLVPGMNAEVAFYVGERSVLSY 455

Query: 426 IIHPITDNWPKIF 438
           ++ PITD + + F
Sbjct: 456 LVRPITDAFSRAF 468


>gi|99077968|ref|YP_611227.1| Type I secretion membrane fusion protein, HlyD [Ruegeria sp.
           TM1040]
 gi|99034911|gb|ABF61965.1| HlyD family secretion protein [Ruegeria sp. TM1040]
          Length = 439

 Score =  286 bits (732), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 71/437 (16%), Positives = 163/437 (37%), Gaps = 15/437 (3%)

Query: 5   MWKNLKR-NHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           M   + R + P    R+    +I   G L  W+    I+ +  + G +  E N   ++  
Sbjct: 6   MRDKISRYSSPQRFSRIGYAIVILTFGVLGGWAAYAQIDSATVAPGIVELEGNRKVVQHL 65

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             GII+   V+    + QG  L+T E +E    ++  +  ++    +   +  E++  + 
Sbjct: 66  EGGIIQTIHVKEAESVSQGDVLVTLESVEARSNVERFRNRLEEAMAIEARLLAEQALSEE 125

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           ++    +      +        L       S +    ++      ++   R+  +   + 
Sbjct: 126 IDYPESLTSNPSPA--------LKNVLDLQSTILADRLAIFRSEQEILQFRIEQLEGQKA 177

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L  +       L    + +  +    E   +  N L  ++  + +    L E I ++  
Sbjct: 178 GLALQKDAYERRLKLQSELVERLTRGAESGVIENNVLTGRKDALIQVEASLGEAISDEAQ 237

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           +   I+E           + +  +R+L   Q    +    LT+ +    +  I +P  G 
Sbjct: 238 VGVAISEARLNRLKLSQEFKERANRELRDIQTDLKEIRENLTVAQDIYYRTEIRAPSDGV 297

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +   +  +  +  +  + LM+IVP      I ++V+P  I +V  G  + VRF  +    
Sbjct: 298 VQDIRVTTEGSVIRPGEILMEIVPPDDNLLIASRVSPLDIDNVVPGQESEVRFSAFKAKL 357

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE-LRNGFPAEVLFTAK 418
                  +E +   I   + + + + YY   +++ +   S+   + L  G PA+V+    
Sbjct: 358 TPVVLGYVESVSQDIITPERSDE-EPYYLARVRVPEENMSEEMRQGLTAGMPADVVIVNG 416

Query: 419 NTTLAQEIIHPITDNWP 435
             ++   ++ P+TD   
Sbjct: 417 ERSVLNYLVSPLTDAIA 433


>gi|308187572|ref|YP_003931703.1| type I secretion membrane fusion protein cyaD [Pantoea vagans C9-1]
 gi|308058082|gb|ADO10254.1| Putative type I secretion membrane fusion protein cyaD [Pantoea
           vagans C9-1]
          Length = 389

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 75/425 (17%), Positives = 139/425 (32%), Gaps = 63/425 (14%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            H      +  L    +   + W+    ++     +G++        I S   GI+K+  
Sbjct: 12  RHERRTSAIIWLCTAALAIFLIWAHFAILDEVTVGTGKVTPSSRAQVIDSLDGGIVKQLN 71

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLE 128
           V  G  + +G  L T +           +  ++ LR     ++ E S      +   + E
Sbjct: 72  VHEGDIVEKGQVLATLDPTRFQSNFGEAQAKVRTLRASSERLEAELSGTPLTFSAETLKE 131

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               +RE QL +                                     R +L    S L
Sbjct: 132 PNLVTRERQLYE-----------------------------------SRRRNLTETISNL 156

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L   Q +L + + L  K A  Q ++ +  R V     +LR  I E +N         
Sbjct: 157 QQSLKLVQDELRLTEPLVAKGAAGQVEVIRLRRQVS----DLRGKIDEARN--------- 203

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                   +YL     +  +N      ++      E    + T+ SP+ G +   Q  + 
Sbjct: 204 --------DYLVRAHEEQVKNNAELDAQLQVAAGKEDQLTRATLYSPVRGIVKDIQVTTV 255

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +    LM+IVP      I  ++ P+ I +++ G  ATV+   Y           +E
Sbjct: 256 GGVLEPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLAATVKVTAYDSSIYGDLPGEVE 315

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQE 425
            + P   Q +   + Q YY V ++         +     +  G  A V       ++   
Sbjct: 316 TVSPDTLQDEV-KRDQYYYRVYVRTQKAELTNRAGRKFPIVPGMVANVEIKTGQKSVMDY 374

Query: 426 IIHPI 430
           +I P+
Sbjct: 375 LIKPL 379


>gi|296102133|ref|YP_003612279.1| Lipase secretion C [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295056592|gb|ADF61330.1| Lipase secretion C [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 437

 Score =  285 bits (730), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 73/443 (16%), Positives = 163/443 (36%), Gaps = 14/443 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSII-GIIGLITWSILLPIEISVSSSGEILNEDNVVEI 59
           MH+   +           R+  + ++ G+   + W+ L P++  V S+G ++ +     +
Sbjct: 1   MHNSDAQKTPLVDVVPFVRLGWVVLLAGLGSFLLWAALAPLDKGVVSTGTVVVDGYRKAV 60

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSA 116
           ++P  G++    V  G  + +G  L+      T   +   +            + +E + 
Sbjct: 61  QAPTGGVVTSIAVREGQTVHKGDLLVLLSQQSTLAQLSAARQHYLTSLIAESRLQSELAG 120

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           +  L           E+ +E L D +    +   ++ +    ++  + +     +  +  
Sbjct: 121 MQTLTLPP-------ETEDEALRDAIKPIVAQQRQLMHARQEALKNAQENDAQAIAGLAR 173

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            R  L          L+   + L  +K L E+    +N     +        E+ E   +
Sbjct: 174 QRDSLARTCETKAQGLALLNRQLKDLKPLMEEGYFPRNRYLDIQVQSASLAGEVGETRSK 233

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
              +   I +L         +  K+I   ++Q +   ++   +LT+         +++P 
Sbjct: 234 IVELGNQIAQLKRGMQQRLIDNRKDIETQIDQLRLQVSESKKQLTLSGVDLSLTRVVAPQ 293

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G ++     S S      + L++IVP +    I +++    I  V KG   T+ F  + 
Sbjct: 294 DGVVMNLALASDSAVVSAGEQLLEIVPQASPLIIDSQIDVALIDKVHKGMPVTLMFTAFN 353

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLF 415
                K  A +  +     +Q +    Q YY++ + +T        + E++ G P EV  
Sbjct: 354 QQSTPKIPARVSLVSAD--RQTDPTTQQPYYKIQIAVTPEGMKKLKSEEVKPGMPVEVFI 411

Query: 416 TAKNTTLAQEIIHPITDNWPKIF 438
            A   +L   ++ PI D   + F
Sbjct: 412 KAGERSLLSYLLKPIVDRASRSF 434


>gi|29421890|gb|AAO73519.1| RsaE [Caulobacter vibrioides]
          Length = 419

 Score =  285 bits (729), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 63/429 (14%), Positives = 158/429 (36%), Gaps = 14/429 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     +    N  +  +    +  +  +G++ W+   P+E +V ++G +  + N   I+
Sbjct: 1   MKPPKIQRPTDNFQSVARIGYGIISLAFVGVLGWAAFAPLETAVIANGVVTTDAN-KTIQ 59

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSAL 117
               G++ K  V  G Q+  G  L   +  +      L +      K L   +  E+   
Sbjct: 60  HLEGGMLSKILVREGQQVKAGQCLFELDPTQVNAAAGLTRAQYVAFKALEARLVAERDQR 119

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             ++   ++L +  +         + +        F     ++   + +   +       
Sbjct: 120 PTISFPTELLAQRADP-------VVARALIDEQSRFIERRQTIAGQVDLFNAQRAQFKSE 172

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              +E ++  L+  L   Q++L  ++ +++K  V +  +   ER     +  + +   ++
Sbjct: 173 IDGIERQAQGLKEQLGFLQEELGDIRKIYDKGLVPRPRILALEREASSLSGAIGQLNADR 232

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              ++ + E   +       + +E+S  + + +   A+   +  +   ++++  I+SP+ 
Sbjct: 233 SKAIQGMAETQLKIRQIREQFFEEVSEAIAETRVQLAEVSEREVVAADSQKRVNIVSPVN 292

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G     + F+     +  +PL+ I P  K   I A+  P  + ++  G T  VR P +  
Sbjct: 293 GVAQALRFFTEGAVVRPGEPLVDIAPTEKAFVIHAQFAPTDVDNIHPGMTTEVRLPSFHS 352

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFT 416
            +       IE +               Y+  ++ +           ++  G PA+V+  
Sbjct: 353 RKVPILNGKIESLSHDRLTDPEGKTA--YFLGVVSVDVKQLPKEFRSKVSAGMPAQVVVP 410

Query: 417 AKNTTLAQE 425
               T+ Q 
Sbjct: 411 TGERTVLQY 419


>gi|92112187|ref|YP_572115.1| Type I secretion membrane fusion protein, HlyD [Chromohalobacter
           salexigens DSM 3043]
 gi|91795277|gb|ABE57416.1| Type I secretion membrane fusion protein, HlyD [Chromohalobacter
           salexigens DSM 3043]
          Length = 395

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 60/420 (14%), Positives = 148/420 (35%), Gaps = 60/420 (14%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            + +    ++ ++  I WS    I +     G ++    +  I+S   GII + +V  G 
Sbjct: 26  ARPVVWAVLVCLLSFIGWSAWAHIAVVTHGEGRVIPVSRIQSIQSLEGGIIDELEVREGD 85

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFES 133
            + +G  L+              +  ++ L+     +  E    D ++   DV       
Sbjct: 86  IVDKGQLLVKLSGTRFRSAYQETENQVQALKAAIARLQAEVLEADSIDFPADV------- 138

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                 D       +  ++F+                       R  L   +  L   + 
Sbjct: 139 ------DAQSSLARSERELFHAR---------------------REKLREATGSLDHEIQ 171

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              + L +++ L E+ AVSQ +           +L+L+++I   +     I         
Sbjct: 172 MASRRLNLIQPLVERKAVSQME-----------SLQLQQDIASLRGKRAEIQ-------- 212

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              +Y+++   +L   +   +     L   +   ++  + SP+ G +      +      
Sbjct: 213 --NSYVQDAYTELTDKKGELSSLEQVLVQRQDQYQRTELNSPVHGRVNAINYTTRGGVVP 270

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             + +M+++P      + AK+ P+ +  +  G  A+V+   Y        +  +E+I   
Sbjct: 271 PGETIMEVIPLEDQLLLEAKIKPQDVAFLAPGMPASVKITAYDYTIYGDLEGTVEQISAD 330

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             +++    T+ YY+V ++    + +    ++ +  G  A+V       ++   ++ P+ 
Sbjct: 331 TIEEETPRGTESYYKVYIRTESGSLTHNGKDLPIIPGMIAQVDIQTGERSVLDYLLKPLL 390


>gi|258544265|ref|ZP_05704499.1| protein secretion ABC efflux system, membrane fusion protein
           [Cardiobacterium hominis ATCC 15826]
 gi|258520503|gb|EEV89362.1| protein secretion ABC efflux system, membrane fusion protein
           [Cardiobacterium hominis ATCC 15826]
          Length = 409

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 74/446 (16%), Positives = 150/446 (33%), Gaps = 64/446 (14%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            +   L+      L          +   + W+    +E      G I+    +  I+S  
Sbjct: 19  DLNAALQEEKHRGLWWSIFFLTAFLTAFVIWAYNSDLEEVTRGQGSIIPSSRLQVIQSLD 78

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI+ K  V+ G  +  G  L+T +D  ++ ++   +  + NL   +   +S        
Sbjct: 79  PGILAKLHVKEGDLVEAGDILVTIDDTRSSAVLRESEAKVVNLEAMLARYRS-------- 130

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                        +  D   K+ ++ +K      +S Y++              R  L+ 
Sbjct: 131 -------------EAYDEPLKFPASVAKELRDRETSAYKAR-------------RRALDE 164

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + L+       + +     + ++   S+ +L + +R      L++ E           
Sbjct: 165 AVTGLQQSKRILDEQIRRTAAMVKRGVSSEIELLRMQRESADLALQINE----------- 213

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                         Y  E + +L + +   A     L +     E+  I SP+ G +   
Sbjct: 214 ----------RRNQYKTEANNELVRTEAELAQARENLAMHADPVERANIRSPMRGIVNNI 263

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +        Q +M+IVP      ++A + P+ +  V  G  A V+   Y        
Sbjct: 264 KITTVGGVINAGQDIMEIVPIDDTLLVQAYIRPQDVAFVHPGLPAVVKLSAYDYAIYGGL 323

Query: 364 KAIIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAEVL 414
             ++  I P     +           Q YY V+++  +   +D N   + +  G  A V 
Sbjct: 324 DGVVTLISPDTLSDERRRSELNLDANQSYYRVLVETKNSKLTDKNGKELRILPGMVATVD 383

Query: 415 FTAKNTTLAQEIIHPITDNWPKIFER 440
               N ++ Q +I PIT     + ER
Sbjct: 384 IKTGNKSVFQYLIKPITRMKQALHER 409


>gi|86749363|ref|YP_485859.1| Type I secretion membrane fusion protein, HlyD [Rhodopseudomonas
           palustris HaA2]
 gi|86572391|gb|ABD06948.1| Type I secretion membrane fusion protein, HlyD [Rhodopseudomonas
           palustris HaA2]
          Length = 444

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 56/436 (12%), Positives = 150/436 (34%), Gaps = 20/436 (4%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
            + +   ++   P + + +   S+      + W+    ++     +G+++       ++S
Sbjct: 9   SNDVRAAVELRTPKTARMLLSASLALFFTFLAWAHFAVLDEVKRGNGKVVPSRQTQVVQS 68

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALD 118
              GII +  V+ G+ + +  PL   ED         I  ++ ++      ++ E     
Sbjct: 69  LEGGIIAELLVQEGAIVDKDQPLARIEDTNFAAQFGEIRERRGAMGARVLRLEAETEGRA 128

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +    ++++ A  + E + L            VF      + + + +   +        
Sbjct: 129 SVVFPAELMQVAPRAVEAERL------------VFEAHNRKLAQDIDVVQQQEIQKTKEI 176

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            +L          L+   +++ + + L+++  V + ++ + +R       +L        
Sbjct: 177 DELRASEKRFSETLTLLNREIALTRKLYDQKVVPEIEMLRADRQATDMRGQLAVVQATII 236

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + E           +  +   DL +++   A     +   +    +  + SP+ G
Sbjct: 237 KTQAAVQEARSRRLNITTAFRAQAEDDLAKSRGDLAVLDENIKSAKDRVRRTELRSPVHG 296

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +      +          LM+IVP      +  ++ P+ I  ++  + A V+   Y   
Sbjct: 297 VVNKLNITTIGAVVAPGASLMEIVPLDDTLLVEGRIRPQDIAFIRPDHEAVVKLSAYDSS 356

Query: 359 REKKFKAIIEKIDPIISQQ---DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEV 413
                   +E+I          D N + + +Y V+++     L  ++  + +  G  A V
Sbjct: 357 VYGSLHGRVERISADTITDEKGDKNERGETFYRVMVRTEKNHLGTNEQPLPIIPGMVATV 416

Query: 414 LFTAKNTTLAQEIIHP 429
                  ++   +I P
Sbjct: 417 EILTGKKSVLDYLIKP 432


>gi|307318642|ref|ZP_07598075.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|306895669|gb|EFN26422.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
          Length = 473

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 66/436 (15%), Positives = 161/436 (36%), Gaps = 19/436 (4%)

Query: 12  NHPASLKRMTLL----SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N  + ++R+ +      ++   G   W+    +  +  +SG I+ +     +     G++
Sbjct: 47  NTHSPIRRLVIAGLTTILVAFGGFFGWAFSTELSSASVTSGTIIVDSKRKTVSHFEGGVL 106

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLID---LKKVSIKNLRCHIDTEKSALDFLNNKY 124
            +  V+ G  +  G PL+  ED      +     ++V +      + +E++ L  ++   
Sbjct: 107 GRILVQEGDHVAPGQPLMKLEDTRARSDLQALQSRRVGLIAKLARLRSERAGLQTVSFPA 166

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D++ K         ++      +  +  F     +    L ++   +         L  +
Sbjct: 167 DLVSK---------VEAAADAVTAENAFFEKRSEAKKSRLAIQRKTIEEYSEKAKSLTAQ 217

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  +    +  T +  L EK    ++ L + +  + +      E   ++    + +
Sbjct: 218 LQATDRQIELMNEQRTAIAILVEKAFAQRSKLIEIDARLSELAATRGELAGDKAQAEKAM 277

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                      +++  EI+ ++   +   A+   ++T  E    +  I +P AG +   Q
Sbjct: 278 AGAELALIGIESDFQSEIAGEITTARLELAEVEQRITAAEDVLRRLEIRAPQAGIVANIQ 337

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +  +     QPL+ IVP  +   +   V+ + I  +  G +  +R   Y        +
Sbjct: 338 LRTPGSAVTPGQPLLDIVPEDEPLLVEMHVSTRDIDSITIGSSTQIRLTAYNQRSHLPLE 397

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTLA 423
             +  I     Q  +      Y+    ++   + + N +I L  G PAEVL   K+ +  
Sbjct: 398 GKVTYIAAD--QSVDEKSNVAYFVARAEVAPESLAANPDIRLYPGMPAEVLIVHKSRSAI 455

Query: 424 QEIIHPITDNWPKIFE 439
             ++ P++D++ + F 
Sbjct: 456 DYLVAPVSDSFNRAFR 471


>gi|163800215|ref|ZP_02194116.1| putative protein secretion protein [Vibrio sp. AND4]
 gi|159175658|gb|EDP60452.1| putative protein secretion protein [Vibrio sp. AND4]
          Length = 446

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 76/446 (17%), Positives = 175/446 (39%), Gaps = 16/446 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRM-------TLLSIIGIIGLITWSILLPIEISVSSSGEILNE 53
           ++ F  + + R  P+S  R+        L   + + GL  W+    +E +  + G++   
Sbjct: 8   VNEFAAEQVFRFLPSSELRLKGPILLGVLALTLFLGGLGYWAATAKLESAAIAYGDLSVL 67

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
               EI+    GII+K  V+ G  + +G  LL     +    +D    ++     H   +
Sbjct: 68  SQNQEIQHLEGGIIEKIYVQEGDLVKKGQLLLQLSKRQANAKLD----ALSGQYIHTIAK 123

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ L+    ++  +  A +    Q  + + +     SK+F          L +    +  
Sbjct: 124 ENRLNAELEEFSEIHWAKDLETIQNTEIVAEAKLVQSKIFAARKRFFGSKLNIIAKSISG 183

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
            +L   +L     + R  L   ++++   + L +K    ++ L Q +R+  +    L + 
Sbjct: 184 AHLELDNLSETKIIERERLKFIEEEIASNQALVQKGFSGKSTLLQLKRLSAEVRSTLSQL 243

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +   + + ++E   +        L +I  DL   ++       +    +    + +I+
Sbjct: 244 DRQSLTVSKRLDENQAKIEELQLERLNDIVEDLRNTKKEMVSIREEYRSAKDIVARTSIV 303

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +PI+G IV  Q F+ +      + L+++VP      + A+V+P+ I  +  G  A +R  
Sbjct: 304 APISGRIVNMQVFTENGVIGSGETLLELVPQDDNLLVEARVSPQDIDLITSGQHAQIRLT 363

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                     +  +  +      + N     ++Y   + ++    +     L +G  AEV
Sbjct: 364 ALNARTLAPLEGTVLTVSADKLSERN---QDDFYLARIALSQEDVAK--YSLTSGMNAEV 418

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIFE 439
           L  ++  T    ++ P+T++  + F 
Sbjct: 419 LILSEPRTPLSYLVKPLTESMNRAFR 444


>gi|332978178|gb|EGK14911.1| HlyD family secretion protein [Psychrobacter sp. 1501(2011)]
          Length = 389

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 72/421 (17%), Positives = 151/421 (35%), Gaps = 55/421 (13%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            +    ++++GI  L+ W+    I+    +   ++      ++++   G++    V  G 
Sbjct: 16  ARLTIWIALVGITILLVWAYFAKIDQVTRAKATVIASARTQQVQASEGGVLTDILVSEGD 75

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++ +G  L+  E+       D        L+  +    + +        +   A   +  
Sbjct: 76  EVKKGQLLVVLEEERAKAAYDSSATKSAALQAQLARLNAEI----FDKPLSFPASVRQYP 131

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           + ++   + ++   +  N  +SS                            L  +L   Q
Sbjct: 132 EYVENQTQLYNRRRQAINEEVSS----------------------------LEKMLVLAQ 163

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           K+L M + L E   VSQ D+ +  R V     ++                     N +  
Sbjct: 164 KELDMNEPLLEYGDVSQADVIKLRRQVADIEAQI---------------------NNKRN 202

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            Y ++   ++ + Q     E+ +L    +  E+K +LSP  G +      +     +  +
Sbjct: 203 KYFEDAQAEMTKAQEELDSELEQLRDRTQVLEEKRLLSPQDGKVNNINITTIGGVVKPGE 262

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +M+++P S    + AKV+P  I +VK+G  A+V+   Y           +  I P    
Sbjct: 263 VIMELLPTSSDLIVEAKVSPADIAYVKEGQRASVKLDAYDFSIFGAMNGTVTYISPDTLM 322

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
           +      + YY V++KI    F+     I ++ G  A V   A   ++   +  PIT   
Sbjct: 323 ETTPKGEEPYYRVLIKIGKAEFAGRGDEIVIKPGMTASVDIKAMERSVLSYLTKPITKTL 382

Query: 435 P 435
            
Sbjct: 383 S 383


>gi|254429494|ref|ZP_05043201.1| auxiliary transport protein, MFP family, putative [Alcanivorax sp.
           DG881]
 gi|196195663|gb|EDX90622.1| auxiliary transport protein, MFP family, putative [Alcanivorax sp.
           DG881]
          Length = 433

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 68/416 (16%), Positives = 150/416 (36%), Gaps = 7/416 (1%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             +++T L+   I+ ++ W++   ++  V + G+++    V +I+S   GI+K   VE G
Sbjct: 15  RARQVTWLASGLIVCVLVWAVFAQLDQVVVAQGQMIPTRTVQKIQSLEGGILKSMLVEEG 74

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G PLL  +D      ++    SI+ L       ++ L  +    D  +       
Sbjct: 75  QMVEAGQPLLELDDTRFRASVEEAGQSIRGLEAAQARLQAELASVA--IDNGDVLVSPVP 132

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                       +        ++S+   L     R+      + + +      +  L+  
Sbjct: 133 MAEPATPSPGWESERAALAGRLASLQGRLFQADRRVEQQRQIQQEAQRNLRTQQQSLALQ 192

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++DL  +++      +  ++  Q +R       E+     +       + +   E     
Sbjct: 193 RQDLQALESAVNDGVLPISEFRQAKRDQVALKGEVDRASLQIAQYGAALQQAIAERRSIA 252

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A +  E   +L + +   A    K   L+    + T+++P+ G +      S     +  
Sbjct: 253 AEFRAESQAELIEVETRLAQAQEKQPALQDQLTRTTMVAPLRGIVKNIAFRSLGGVIRPG 312

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + +M+IVP        A+V+PK I  VK G    V+F  Y           +E +   + 
Sbjct: 313 EAIMEIVPVEDALIAEARVSPKDIAWVKAGLDTQVKFSAYDFTSHGGMPGQVEYVSADVL 372

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           + + +     YY V + +     S  +  +  G    +       T+    + P+ 
Sbjct: 373 RDEED---NPYYRVKVAL--QGLSQPDQPIMPGMQVTIDIMTGKRTVMSYWLKPLL 423


>gi|84687478|ref|ZP_01015355.1| HlyD family secretion protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84664503|gb|EAQ10990.1| HlyD family secretion protein [Rhodobacterales bacterium HTCC2654]
          Length = 435

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 63/422 (14%), Positives = 150/422 (35%), Gaps = 14/422 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            +        +  + + GI G I W+ +  IE      G ++    V  I+S   GI+++
Sbjct: 18  PQGEGRRGALLLTVLVAGIAGFIWWAAVFEIEEVTRGVGRVVPSQQVQVIQSLEGGIVRE 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             ++ G+ + +  PLL  +D                L   +   ++  +           
Sbjct: 78  ILIDEGATVDRNAPLLRIDDTAAGAQRGELLEQEATLMAELIRVRTEAEG---------G 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              +  E L     +  +   +VF    S +   L++   ++        +     + L 
Sbjct: 129 EALAFPEALAARAPEAVAAEQEVFASRRSQLSSELQVLEDQLTQRRAEIEEARAMIAKLE 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             ++   +++ + +   E  AV+Q +L + E  + +   +L  +      +   I E   
Sbjct: 189 GQIAPLAEEVRLTRQYVETGAVTQIELLRLETRLAELEGDLAVSRARMPRLDAAIAEAEA 248

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +       Y+      L + Q   +     L   E    + T+ +P+ G +      +  
Sbjct: 249 QLETARRAYVLTARERLARVQGELSVLRETLRAAEDRVTRTTLRAPVRGVVNTLNVTTIG 308

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  PL++IVP      I A+++P+ +  ++ G  A+V+   +  +        +E+
Sbjct: 309 AVVGPGDPLVEIVPVDDHLLIEARISPQDVAFLRPGDPASVKITAFDYVVYGSLSGTVER 368

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           I       ++      +++V ++        N  ++  G  A+V       T+   +++P
Sbjct: 369 IGADTLTDED---GNAFFQVAVRTDSTDLGGN--QISPGMVAQVDIQTGRKTVLDYLLNP 423

Query: 430 IT 431
             
Sbjct: 424 FL 425


>gi|304397521|ref|ZP_07379399.1| type I secretion membrane fusion protein, HlyD family [Pantoea sp.
           aB]
 gi|304355139|gb|EFM19508.1| type I secretion membrane fusion protein, HlyD family [Pantoea sp.
           aB]
          Length = 389

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 75/425 (17%), Positives = 138/425 (32%), Gaps = 63/425 (14%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            H      +  L    +   + W+    ++     +G++        I S   GI+K+  
Sbjct: 12  RHERRTSAIIWLCTAALAIFLIWAHFAILDEVTVGTGKVTPSSRAQVIDSLDGGIVKQLN 71

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLE 128
           V  G  + +G  L T +           +  ++ LR     ++ E S      +   + E
Sbjct: 72  VHEGDIVEKGQVLATLDPTRFQSNFGEAQAKVRTLRASSERLEAELSGTPLKFSAETLKE 131

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               +RE QL +                                     R +L    S L
Sbjct: 132 PNLVTRERQLYE-----------------------------------SRRRNLTETISNL 156

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L   Q +L + + L  K A  Q ++ +  R V     +LR  I E +N         
Sbjct: 157 QQSLKLVQDELRLTEPLVAKGAAGQVEVIRLRRQVS----DLRGKIDEARN--------- 203

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                   +YL     +  +N      ++      E    + T+ SP+ G +   Q  + 
Sbjct: 204 --------DYLVRAHEEQVKNNAELDAQLQVAAGKEDQLTRATLYSPVRGIVKDIQVTTV 255

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +    LM+IVP      I  ++ P+ I  ++ G  ATV+   Y           +E
Sbjct: 256 GGVLEPGGKLMEIVPLEDQLLIETRINPRDIAWIRPGLAATVKVTAYDSSIYGDLHGEVE 315

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQE 425
            + P   Q +   + Q YY V ++         +     +  G  A V       ++   
Sbjct: 316 TVSPDTLQDEV-KRDQYYYRVYVRTQKAELTNRAGRKFPIVPGMVANVEIKTGQKSVMDY 374

Query: 426 IIHPI 430
           +I P+
Sbjct: 375 LIKPL 379


>gi|86136062|ref|ZP_01054641.1| putative type I secretion protein [Roseobacter sp. MED193]
 gi|85826936|gb|EAQ47132.1| putative type I secretion protein [Roseobacter sp. MED193]
          Length = 390

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 70/427 (16%), Positives = 155/427 (36%), Gaps = 54/427 (12%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
               R+  L    ++  I W+    ++  V   GE+++      +++   GI+ +  V  
Sbjct: 14  RGASRIVYLVGAALLLFIGWAAFASVDEIVRGEGEVVSSSRAQIVQNLEGGILAELYVRQ 73

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++  G  L   +D +   + D  +  I  L       ++ +D                
Sbjct: 74  GDEVRAGQVLAKLQDTKFRTIADELQDQIDTLEIKQFRLEAEMD---------------- 117

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                   G Y  +         + +  S +  L   +       D +++ +  R +L  
Sbjct: 118 --------GAYEFSVPNDLANRSAEILASERALLNARQG------DFDSRRTSARKILDQ 163

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
              +L  M+ L+E+N V+  ++N+ ++                       NE+  +  L+
Sbjct: 164 LNDELANMRKLYEQNIVALIEVNRSQKAATD--------------AQAKFNEIGTQNELK 209

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A    E  R+L       A       + +   ++  I SP++G +      +     + 
Sbjct: 210 LAEEYSEALREL-------ASLRQDQRLAQDQLDRTVITSPMSGIVNSLGVTTIGGVVRP 262

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + + +I+P  +  ++ A+V PK I  V+ G  AT++   Y           ++ +    
Sbjct: 263 GEEIFEIIPMGEELFVEARVNPKDIASVQTGQPATIKLSAYDYTIYGALNGEVDFVSADT 322

Query: 375 SQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            + + N + + YY V +++   DL      IE+R G  A       + T+   ++ P+  
Sbjct: 323 FEDERNPRAEPYYRVTVRVDRSDLTERQLGIEIRPGMRATAELQTGSKTVLNYLLKPLYK 382

Query: 433 NWPKIFE 439
           +  + F 
Sbjct: 383 S-QEAFR 388


>gi|34497191|ref|NP_901406.1| secretion protein [Chromobacterium violaceum ATCC 12472]
 gi|34103048|gb|AAQ59411.1| secretion protein [Chromobacterium violaceum ATCC 12472]
          Length = 382

 Score =  284 bits (726), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 69/420 (16%), Positives = 150/420 (35%), Gaps = 56/420 (13%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            R+   S   ++G   W+   P++     SG+++   +   +++   G ++   V  G +
Sbjct: 9   GRLIWASAAAVLGAGVWAANAPLDQITRGSGQVIASSHTQIVQAADGGTMQHLYVREGDR 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +      ++   +     L  +I   K+ +              E +   
Sbjct: 69  VKRGQLLAEMDRARAESMVKESEARAAALYANISRLKAEV-----------FGGEPQFPV 117

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            ++   ++    S +F    +++   L                     S L++ L+  + 
Sbjct: 118 EVNGYPEFQRNQSILFIKRQAAIREEL---------------------SSLQSSLAIVKN 156

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +L M   L ++  VS+ D+ + +R + + + ++                           
Sbjct: 157 ELDMNLPLVKQGDVSRADILRLQRQMAELSGQI---------------------TNRKNK 195

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           YL++   +L + +   A         +       + +P+ G I   +  +     +  + 
Sbjct: 196 YLQDSQTELSKAEEDLASVSQIKAQRQDALNNTRLSAPVDGVIKSVRMTTPGAVLKPGEE 255

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L+ IVP      + AK+ P  I ++KKG  ATV+F  +       FK ++  I      +
Sbjct: 256 LLSIVPAGDELVVEAKIKPADIAYLKKGLPATVKFDAWDYSIYGAFKGVVSYISADTLTE 315

Query: 378 DNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
           +     Q +Y V + +    F       IEL+ G  A+V       T+ Q +  PIT   
Sbjct: 316 EGKHGDQLFYRVKISLPRQNFLNVKGKLIELQPGMTAQVDIKTGTRTVLQYLTKPITKTL 375


>gi|89094687|ref|ZP_01167623.1| Type I secretion membrane fusion protein, HlyD [Oceanospirillum sp.
           MED92]
 gi|89081033|gb|EAR60269.1| Type I secretion membrane fusion protein, HlyD [Oceanospirillum sp.
           MED92]
          Length = 439

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 61/433 (14%), Positives = 141/433 (32%), Gaps = 15/433 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + +    P     +  L  + I   I W+    ++      GEI+    +  I++   G 
Sbjct: 16  EAMAEQAPKGASALLWLMALFIAIAIAWANWAELDEITRGDGEIIPSSQLQVIETLEGGA 75

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V  G  + +G  L   +DI  +  +   +V    L       ++  +        
Sbjct: 76  VSEILVHEGDLVEKGQVLFRIDDIRFSSSLKENEVRQYELIAKAARLRAEAENKEF---- 131

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                        +           +F    + +  SL     ++          +++  
Sbjct: 132 ------VAPADFPEEYRAMLQQEQHLFGTRKAEMLTSLGGLEQQVAQRVQELKAAQSQEK 185

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L+      +++L + + L ++  +S+ +  + +R +     EL         +   + E
Sbjct: 186 QLQRSYGLLKRELDITRPLLKEGVISEVEFLRLKRQLNDLQGELSGVRLNIPRIESTLQE 245

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              + +     +  E  R+L +     A     LT +    ++  + SP+ GT+      
Sbjct: 246 TKQKLDGAELQFRNEAQRELNEVVAEGARIKQALTGMSDRIDRAEVRSPVKGTVKQMLVN 305

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q    L+ I+P      + AK+ P  I ++  G  A ++   Y         A 
Sbjct: 306 TVEGVVQPGDELLNIIPWEDKLLVEAKIKPSDIANIAPGQPAVIKVSAYDFSIYGGVDAK 365

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +  + P     +     + +Y V L+     L  +   + L  G    V       T+  
Sbjct: 366 VIYVSPSTIVDEE---GESFYTVRLETEKPFLGNASTELPLIAGMTVSVDILTGKKTVMA 422

Query: 425 EIIHPITDNWPKI 437
            ++ P+     + 
Sbjct: 423 YLLKPVLKAKDRA 435


>gi|254488405|ref|ZP_05101610.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. GAI101]
 gi|214045274|gb|EEB85912.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. GAI101]
          Length = 421

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 69/410 (16%), Positives = 152/410 (37%), Gaps = 12/410 (2%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WS+   I  +V +SG I  E+N   ++ P  G++ +   ++G +I  G  ++  +D    
Sbjct: 20  WSVTARIAGAVIASGMIQVENNRQVVQHPEGGVVGEILAKDGDEIEAGDVVMRLDDALLQ 79

Query: 94  DLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + +   +   IK  +  +  E+  L+ +    +++E A  S E +             
Sbjct: 80  SELAIVQGQLFEIKARQARLAAERDGLEDIVLPDELVEAAANSPEIE------SMIDGQR 133

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +F     S+ R       ++          E + +  +        +L   ++L EK  
Sbjct: 134 SLFLARKESLRREADQISEQIAQANNQIEGTEAQLAAFQTQQDLILSELEDAESLLEKGL 193

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              + ++  +R   +   E+         +   I  L  +         +E +  L   Q
Sbjct: 194 AQASKVSSLQREQARLLGEIGSLKATVAQLRGQIASLEIQVLKLTTTRREEANTTLSDLQ 253

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +   +   L +T  +  I SP++G +  +Q F+       + P+M ++P  +   +
Sbjct: 254 YREIELAERRLSLRETLSRMEIRSPVSGVVYDSQIFALQAVLSPAAPIMYVIPQDQPLVV 313

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV- 389
            A++    I  V  G  A++RF  +      +    + +I   + + +  +  Q +Y   
Sbjct: 314 SARIEAINIDQVHVGQEASLRFVAFEQRTTPEIFGQVSRISADVFKDE--VTGQSFYRAE 371

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +L   +      + +L  G P E        +    +  P+TD + K F 
Sbjct: 372 LLPREEELEKLGDQKLVPGMPVEAFIRTAERSPLSYLAKPLTDYFNKAFR 421


>gi|149377645|ref|ZP_01895382.1| Type I secretion membrane fusion protein, HlyD [Marinobacter
           algicola DG893]
 gi|149358057|gb|EDM46542.1| Type I secretion membrane fusion protein, HlyD [Marinobacter
           algicola DG893]
          Length = 388

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 80/426 (18%), Positives = 159/426 (37%), Gaps = 55/426 (12%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K+L R++ AS   +   S++ I   I WS    ++      G+++    +  I+S   GI
Sbjct: 10  KSLSRHYRASHP-ILWFSLLVIAVFIGWSAWAEVDEVTRGEGQVVPLSRMQTIQSLDGGI 68

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V  G ++ +G  L+  +D +           I  LR  I   K+         +V
Sbjct: 69  LAELLVRRGDRVERGQLLVRLDDTQFRSAYLEIASQIAVLRASIARLKA---------EV 119

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           LEK+ E    + LD  G+   +   +F+     +  + +                     
Sbjct: 120 LEKS-EIDFPETLDPEGELVQSERALFHARRERMREAER--------------------- 157

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +   +S  ++ L +++ L E+ +VS+ +  +  + +      L E              
Sbjct: 158 SINKEMSLARRQLDLVEPLVERRSVSEMESLKLGQTIASLAGRLAEL------------- 204

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                      Y+++   +L   Q   +    KL       E+  I SP+ G +      
Sbjct: 205 --------RNTYVQDAYTELSAKQAEVSSLEQKLMQRRDKLERTNIYSPVRGRVNDILIN 256

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +  +P+M+I P      I AKV P+ +  V  G  A+V+   Y        +  
Sbjct: 257 TEGGVIRPGEPIMEITPIEGQLLIEAKVRPQDVAFVAPGMPASVKITAYDYTIYGDLQGE 316

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQ 424
           +E+I     +++     + +YEV+++        N   + +R G  A+V       TL  
Sbjct: 317 VEQISEDTIEEETPRGKEAFYEVLIRTEKAYLERNGTTLPIRPGMVAQVDIQTGKRTLLS 376

Query: 425 EIIHPI 430
            ++ PI
Sbjct: 377 YLLKPI 382


>gi|71282458|ref|YP_269145.1| HlyD family type I secretion membrane fusion protein [Colwellia
           psychrerythraea 34H]
 gi|71148198|gb|AAZ28671.1| type I secretion membrane fusion protein, HlyD family [Colwellia
           psychrerythraea 34H]
          Length = 441

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 83/424 (19%), Positives = 168/424 (39%), Gaps = 16/424 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++ +T + +  I  L+ WSI   +E    + G+++   +   I+S   G I    VE G 
Sbjct: 29  IRNITYMILGSIFCLLLWSIFSKVEEIAKAQGQVVPLGHRQVIQSQLGGTINAIVVEEGD 88

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L+ F  I +    +       NL    +   +  +     ++   + +     
Sbjct: 89  VVKKGDVLVNFIAINSQSAKEELASKYANLMMKKERLSAFKERREADFNDYNEVYPRLAL 148

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q    LG  +S    + +   S V +S                 +E +   L+  + + +
Sbjct: 149 QQRQALGSMNSELVAIESLSKSDVAKS-----------QAEYHAIEKEIPALKDQIIASE 197

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           K L MM  L +   +SQ  L + ++ +     EL     +++ + ++++ L ++ N + A
Sbjct: 198 KTLAMMTTLAKTGGISQLKLLETQQKLDSYQRELSVLEGKEQVLSKNMSNLNEQLNNKKA 257

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           + LK +   L + Q       ++    +    Q T+++P+ G I    S S  +      
Sbjct: 258 SLLKLVGETLTETQGEILAVEARQRSSDSDVSQSTVVAPVNGIIQSIPSSSVGSVIPPGG 317

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +  IVP ++   + AK++P+ I  V  G  A ++   +   R      I++KI P    
Sbjct: 318 TVAVIVPVTEKALLEAKLSPRDIGFVSIGQKARIKIDAFDYSRYGALDGIVKKISPSTDA 377

Query: 377 QDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            +       +Y+V + I    F  N  ++EL  G   E      + T+ Q +  P+  N 
Sbjct: 378 DER---GGVFYKVQIAIDKPYFGKNPGDLELIPGMTGEADIVTGDKTIFQYLWKPVFTNV 434

Query: 435 PKIF 438
              F
Sbjct: 435 TSAF 438


>gi|297171415|gb|ADI22417.1| membrane-fusion protein [uncultured Rhodospirillales bacterium
           HF0500_02H05]
          Length = 460

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 66/439 (15%), Positives = 159/439 (36%), Gaps = 14/439 (3%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
             +  +++    +     + I+G  G +TW     ++ +  ++G ++ +     +     
Sbjct: 30  EREASRQSLRKPIIAGLTVIILGFGGFLTWGFTAELDSAAVATGSVIVDSKKKVVNHYEG 89

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLN 121
           GI+KK  VE G  +  G  L   +   +   +   +     +      +  E+   + + 
Sbjct: 90  GILKKLLVEEGQNVKVGQTLALLDGTRSESELGQLRGERFGLMAKLARLRAEQRGQNNIA 149

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              +++             ++G   S   ++F+            +  ++         L
Sbjct: 150 FPQELMATEEG--------YVGDILSDEKRLFSKRNEVYAAKRDAQAKQIEQFEAEAQAL 201

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            ++ +          + L  ++ L +K   ++  L + E        ++ E   ++    
Sbjct: 202 VSQINARTRQEKLVAEQLEGIRQLADKGFATRTQLVEVENNWSDLVGDMGEFKAQKAAAQ 261

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           +   E           +  +I+ ++++ Q  F D   ++   +   ++  + +P AGT+ 
Sbjct: 262 QQKAEAEINLASIEMEWQSDIATEIQEAQLAFNDVTQRIRASQDVLDRLEVKAPQAGTVS 321

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             Q  +       ++P+M I+P  +   I A++  + I  V+ G  A +R   Y+  R  
Sbjct: 322 NIQIRTPGGVISPAEPIMDIIPEDEPLVIEARINRQDIDSVQVGSKAQIRLTAYSQRRLA 381

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
                +  + P   Q  +  +   YY V   I     +  ++I+LR G PA +L      
Sbjct: 382 PLMGEVRYVAPD--QTVDEQRDSSYYIVRAAIDPKELAKHDDIKLRPGMPANILVLKTPR 439

Query: 421 TLAQEIIHPITDNWPKIFE 439
                ++ PI  +  K F 
Sbjct: 440 KAIDYLVDPIVQSMDKAFR 458


>gi|261342097|ref|ZP_05969955.1| protein secretion ABC efflux system, membrane fusion protein
           [Enterobacter cancerogenus ATCC 35316]
 gi|288315428|gb|EFC54366.1| protein secretion ABC efflux system, membrane fusion protein
           [Enterobacter cancerogenus ATCC 35316]
          Length = 399

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 66/426 (15%), Positives = 140/426 (32%), Gaps = 61/426 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              +R+ + S++  I L  W+    ++   + +G+++       ++S   GI+ +  V  
Sbjct: 25  TGARRIVIFSLLLFIALGIWAWFGVLDEVSTGTGKVIPSSREQVLQSLDGGILTELNVHE 84

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G Q+  G  L   +   +   +     S    R  + +       +N+       +    
Sbjct: 85  GDQVQAGQILARLDPTRSESNVGE---SAARYRASLASSVRLYAEVNDLPLTFPPSLAKW 141

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           ++ +      Y+S                              R  LE+    LRA L  
Sbjct: 142 KDLIAAETRLYNS-----------------------------RRAQLEDTQRELRAALDL 172

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             K+L + + L +  A S  ++ + +R      L+L +   +                  
Sbjct: 173 ANKELAITQRLVKTGAASHVEVLRLQRQKSDLELKLTDVRSQ------------------ 214

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              Y  +    L +         + L   E +  + T+ SP+ G +   +  +       
Sbjct: 215 ---YYVQAREALSKANAEVDMVSAVLKGREDSVTRLTVKSPVRGIVKNIKVTTIGGVIPP 271

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           +  LM+IVP      I  +++P+ I  +     A V+   Y          ++E I P  
Sbjct: 272 NGELMEIVPVDDHLLIETRLSPRDIAFIHPNQEALVKITAYDYAIYGGLHGVVETISPDT 331

Query: 375 SQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            Q +   +   YY V ++ +       +  +  +  G  A V       T+   +I P  
Sbjct: 332 IQDEAKPEV-FYYRVFIRTSQDYLVNKAGRHFSIVPGMIATVDIKTGEKTVLDYMIKP-- 388

Query: 432 DNWPKI 437
             + + 
Sbjct: 389 --FNRA 392


>gi|283784650|ref|YP_003364515.1| membrane fusion protein of T1SS [Citrobacter rodentium ICC168]
 gi|282948104|emb|CBG87669.1| putative membrane fusion protein of T1SS [Citrobacter rodentium
           ICC168]
          Length = 394

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 65/434 (14%), Positives = 152/434 (35%), Gaps = 61/434 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+R+     + +  L ++ +     W+ +  ++   + +G+I+       I+S   GI+ 
Sbjct: 14  LRRHFFGMGQSVIWLCVLLLGLFWLWACMFRLDEVTTGTGKIIPSAREQLIQSLEGGILT 73

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V+ G  +  G  L   +       +D  +     LR  +         ++    +  
Sbjct: 74  EMKVQEGDIVQAGQVLARLDPTIAGAGVDEAQGK---LRAALAMFSRLHAEVDGTPLMFP 130

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              +   + L D    YHS  +                             +L+   S L
Sbjct: 131 PELKGFPQLLEDETSLYHSRQN-----------------------------NLKASLSGL 161

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L+   K+L +  +L  K A S  ++ +  R       +L+  I + +N         
Sbjct: 162 QDGLALVNKELRLTASLVAKGAASDVEVLRLRRQAN----DLQSKIDDTRN--------- 208

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y+ +   +L +      ++ S +     + ++ T+ +P+ G +   +  + 
Sbjct: 209 --------QYIVKAREELAKAAAEVEEQKSVIRGRADSLKRTTLYAPVKGIVKNIEVNTI 260

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q    +M+IVP      +  +++P+ +  +  G  A V+   Y        +  + 
Sbjct: 261 GGVVQPRGNVMEIVPIDDRLLVEVEISPRDVAFITPGQRAKVKLTAYDYHIYGGLEGKVV 320

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSD---NNIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q + + + + YY V ++      ++       L  G  A       + T+ + 
Sbjct: 321 FISPDTIQDEVH-RDRYYYRVYVRTEKDYLTNQLGKQFPLYPGMIATADIHTGSKTIMEY 379

Query: 426 IIHPITDNWPKIFE 439
           +I P+     +  E
Sbjct: 380 LIKPL----NRARE 389


>gi|163739525|ref|ZP_02146935.1| Type I secretion membrane fusion protein, HlyD [Phaeobacter
           gallaeciensis BS107]
 gi|161387278|gb|EDQ11637.1| Type I secretion membrane fusion protein, HlyD [Phaeobacter
           gallaeciensis BS107]
          Length = 389

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 71/425 (16%), Positives = 156/425 (36%), Gaps = 53/425 (12%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R       R+  L    ++  + W+    ++  V + GE+++      +++   GI+ + 
Sbjct: 9   RETSRGASRIIYLVAGALVVFLLWASFAWVDEIVRADGEVVSSSRSQIVQNLEGGILAEL 68

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G  +  G  L   +D +     D  +  I  L       ++ L+            
Sbjct: 69  HVHQGDVVKAGQILARLQDTKFRAAADDLQDRIDALEIKQYRLEAELE------------ 116

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                       G +     +        +Y S +  L   ++ + +R D        R 
Sbjct: 117 ------------GAFDFNVPEELADRSPGIYTSERALLNARQTDFTSRRDSA------RE 158

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
           +L   + +L  MK L +K  V+  ++N+ ++ V                     NE+  +
Sbjct: 159 ILDQLKDELANMKRLHKKEIVALIEVNRSQKSVSD--------------AQAKYNEIGTQ 204

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           + LE A        D  +  R       +L + +    +  I SP+AG +      +   
Sbjct: 205 SELELAE-------DYSKTLRELTSYRQELRLAQDQLNRTVITSPMAGIVNSLAVTTIGG 257

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  + +++I+P  +  ++ A+V P+ I  V+ G  AT++   Y        +  ++ +
Sbjct: 258 VIRPGEEIVEIIPLGEEMFVEARVKPENIASVQPGQDATIKLSAYDYTIYGSLRGKVDFV 317

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIH 428
                + + N + + YY V +K+    F++    IE+R G  A       + T+   ++ 
Sbjct: 318 SADTFEDERNPRAEPYYRVTVKVDRSEFTERQQAIEIRPGMRATAELQTGSKTILNYMLK 377

Query: 429 PITDN 433
           P+  +
Sbjct: 378 PLYKS 382


>gi|163741950|ref|ZP_02149339.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Phaeobacter gallaeciensis 2.10]
 gi|161384671|gb|EDQ09051.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Phaeobacter gallaeciensis 2.10]
          Length = 389

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 71/425 (16%), Positives = 156/425 (36%), Gaps = 53/425 (12%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R       R+  L    ++  + W+    ++  V + GE+++      +++   GI+ + 
Sbjct: 9   RETSRGASRIIYLVAGALVVFLLWASFAWVDEIVRADGEVVSSSRSQIVQNLEGGILAEL 68

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G  +  G  L   +D +     D  +  I  L       ++ L+            
Sbjct: 69  HVHQGDAVKAGQILARLQDTKFRAAADDLQDRIDALEIKQYRLEAELE------------ 116

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                       G +     +        +Y S +  L   ++ + +R D        R 
Sbjct: 117 ------------GAFDFNVPEELADRSPGIYTSERALLNARQTDFTSRRDSA------RE 158

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
           +L   + +L  MK L +K  V+  ++N+ ++ V                     NE+  +
Sbjct: 159 ILDQLKDELANMKRLHKKEIVALIEVNRSQKSVSD--------------AQAKYNEIGTQ 204

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           + LE A        D  +  R       +L + +    +  I SP+AG +      +   
Sbjct: 205 SELELAE-------DYSKTLRELTSYRQELRLAQDQLNRTVITSPMAGIVNSLAVTTIGG 257

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  + +++I+P  +  ++ A+V P+ I  V+ G  AT++   Y        +  ++ +
Sbjct: 258 VIRPGEEIVEIIPLGEEMFVEARVKPENIASVQPGQDATIKLSAYDYTIYGSLRGKVDFV 317

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIH 428
                + + N + + YY V +K+    F++    IE+R G  A       + T+   ++ 
Sbjct: 318 SADTFEDERNPRAEPYYRVTVKVDRSEFTERQQAIEIRPGMRATAELQTGSKTILNYMLK 377

Query: 429 PITDN 433
           P+  +
Sbjct: 378 PLYKS 382


>gi|190890001|ref|YP_001976543.1| protein secretion protein, HlyD family [Rhizobium etli CIAT 652]
 gi|190695280|gb|ACE89365.1| probable protein secretion protein, HlyD family [Rhizobium etli
           CIAT 652]
          Length = 406

 Score =  283 bits (723), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 60/411 (14%), Positives = 144/411 (35%), Gaps = 14/411 (3%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
              W+ L P++ +  + G I    +   I+    GII      NG  +  G  L+  +  
Sbjct: 2   AGGWATLAPLDSAAVAPGVIKVAGDRKLIQHLEGGIIADLNAANGDIVKAGKVLIQLDST 61

Query: 91  ETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +    +DL +  I     L   +  E+     +     +L  + +S ++ +        +
Sbjct: 62  QARTKLDLVQNRIATREALAARLRAERDDKAEIEFDPALLANSSKSAKDAV--------A 113

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               VF     ++    ++   R R        L+         +   + +   +++L +
Sbjct: 114 AQRDVFAAKHHNLQDEREILSQRRRQTQEEITGLQELIVTEDKQIEVFEDETKDLESLLK 173

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  V++       R   +   +   N+         + E+  +        L E   +L 
Sbjct: 174 RGLVTRERGLLLTRQQREVEGDRATNVAAIARAKSAMAEIDMQILNLSTLRLNEAVEELS 233

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +    D   +    +    +  I++P+ G ++  +  ++    +  + LM +VP  + 
Sbjct: 234 KVEAELVDLRQEERSAKDVLARTDIIAPVDGIVMDLKVHTAGGVVKPGETLMTVVPLGQQ 293

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + A V P+ ++ +  G  A V FP +A       + ++  +      ++       Y+
Sbjct: 294 LVVEAMVRPEDVETIAPGQRARVSFPAFARYNLPPLEGVVGIVSADRMVEER--SGAPYF 351

Query: 388 EVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              + I     +     +L  G  +E +      T+   +  PIT N+ + 
Sbjct: 352 AATVLIDKSELAKLEGRKLMPGMSSEAMIRTGARTVLSYLAEPITQNFRRA 402


>gi|254466675|ref|ZP_05080086.1| type I secretion membrane fusion protein, HlyD [Rhodobacterales
           bacterium Y4I]
 gi|206687583|gb|EDZ48065.1| type I secretion membrane fusion protein, HlyD [Rhodobacterales
           bacterium Y4I]
          Length = 392

 Score =  282 bits (722), Expect = 6e-74,   Method: Composition-based stats.
 Identities = 68/423 (16%), Positives = 153/423 (36%), Gaps = 53/423 (12%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
            P S  R+  L++  ++  + W+    I+  V   G++++      +++   GI+ +  V
Sbjct: 14  TPRSASRIIYLALAAVLTFLIWAAFASIDEIVRGEGQVVSSSRAQIVQNLEGGILAELHV 73

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  +  G  L   +D +     D  +  I  L                          
Sbjct: 74  RQGDIVTAGQVLAKLQDTKFRAAADELQNQIDAL------------------------DI 109

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            R        G +  +  ++       +  S +  LT  ++ + +R D        R ++
Sbjct: 110 KRFRLEAQMKGAFEFSVPEMLAQRSPGILASERGLLTARQTDFTSRRDSA------RQIM 163

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
                +L  M+ L+++  V+  ++N+  +    +                  NE+  +A 
Sbjct: 164 EQLNGELANMEQLYKQKIVALIEVNKARKAATDARA--------------KYNEIGTQAE 209

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           LE A        +  Q  R       +  +      +  I SP+AG +      +     
Sbjct: 210 LEQAE-------EYSQTLRDLTTLRQEQRLAVDQLNRTIITSPMAGIVNSLAVTTIGGVI 262

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +  + +++I+P  +  ++ A+V P+ I  V+ G  AT++   Y        +  ++ +  
Sbjct: 263 RPGEEILEIIPLGEELFVEARVKPEDIASVQPGQDATIKLSAYDYTIYGSLRGKVDFVSA 322

Query: 373 IISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              + + N + + YY V +++    F     +IE+R G  A         T+ Q ++ P+
Sbjct: 323 DTFEDERNPRAEPYYRVTVRVDKSGFTERQQSIEIRPGMRATAELQTGAKTVLQYLLKPL 382

Query: 431 TDN 433
             +
Sbjct: 383 YKS 385


>gi|86355991|ref|YP_467883.1| HlyD family protein secretion protein [Rhizobium etli CFN 42]
 gi|86280093|gb|ABC89156.1| probable protein secretion protein, HlyD family [Rhizobium etli CFN
           42]
          Length = 406

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 63/411 (15%), Positives = 144/411 (35%), Gaps = 14/411 (3%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
              W+ L P++ +  + G +    +   I+    GII      NG  +  G  LL  +D 
Sbjct: 2   AGGWATLAPLDSAAVAPGLVKVAGDRKLIQHLEGGIIAGLTAANGDIVKAGKVLLQLDDT 61

Query: 91  ETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +    +DL +  I     L   +  E+     +     +L    +S  + +        +
Sbjct: 62  QARARLDLVQNRIATREALAARLRAERDGKAEIEFDPALLANPTKSARDAV--------A 113

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               VF+    ++    ++   R R        L+         +   + +   +++L +
Sbjct: 114 AQRDVFSAKHHNLKDEREILSQRRRQTEEEITGLQELIVTEDKQIEVFEGETRDLESLVK 173

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  V++       R   +   E   N+         + E+  +        L +   +L 
Sbjct: 174 RGLVTRERWLLLRRQQREVEGERATNVAAIARARSAMAEIDMQIVNLNTLQLNQAVEELS 233

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +    D   +    +    +  +++P+ G I+  +  ++    +  + LM IVP  + 
Sbjct: 234 KVEAELFDLRQEERSAKDVLARTNVVAPVDGIIMDLKVHTTGGVVKPGETLMTIVPMGQQ 293

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             I A V P+ ++ +  G  A V FP +A         ++E +      ++       ++
Sbjct: 294 LVIEAMVRPEDVETIASGQPARVSFPAFARYNLPPLDGVVEIVSADRMVEER--SGAPFF 351

Query: 388 EVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              + I     +     +L  G  +E +      T+   +  PIT N+ + 
Sbjct: 352 AATVVIDQSELAKLEGRKLLPGMSSETMIRTGARTVLSYLAEPITQNFRRA 402


>gi|254472763|ref|ZP_05086162.1| rhizobiocin secretion protein RspE [Pseudovibrio sp. JE062]
 gi|211958227|gb|EEA93428.1| rhizobiocin secretion protein RspE [Pseudovibrio sp. JE062]
          Length = 438

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 71/427 (16%), Positives = 147/427 (34%), Gaps = 13/427 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             L+    L+ + I+G  TWS +  I  +V +   I+ E +   ++    GII +  V+N
Sbjct: 17  RHLRVGGYLAALLILGGGTWSAVTEISGAVVAPATIVVETSTKTVQHRDGGIINQILVKN 76

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAF 131
           G  +  G  +L  +D  T   + +    +  L      +  E      ++ K        
Sbjct: 77  GDFVKAGDLVLRLDDTLTRSNLAVLTNQLDELYAQEARLTAEIQGRKEISFKKRAQSPLH 136

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +    + +          K        +   +     ++  +   R   + +  L+ A 
Sbjct: 137 RAHLMMIEETQRNMMEARQKNHLSKREQLQTQIVQFEKQIGGLIRQRDAKQTEVDLVNA- 195

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +L  +++L +K  V+++ +   +R       EL   I +       I+E     
Sbjct: 196 ------ELGGLESLRKKKLVTESRVMAFQRERSSLEGELGGIIAQIARSEEAISERRVMI 249

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                         L+Q +   ++   +    +    +  I +P  G +      +    
Sbjct: 250 LQADEELRSNNLEQLQQTRAQISELEERRIAAQDELRRTEIRAPQNGKVFDLAVHTIGGV 309

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               + +MKIVP      + AKV P  +  +     AT+R P +      + KA ++ I 
Sbjct: 310 VMGGEVVMKIVPEEDQLIVEAKVQPVDVDQIGPDQEATIRLPAFDKRTTPELKARLKTIS 369

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           P + +      T  YY   L I +      +   L  G P E     ++ ++   ++ P+
Sbjct: 370 PDLVEDPRTGST--YYLAELAIPENELERLDGKSLIPGMPVEAFIKTEDRSVLSYLVKPM 427

Query: 431 TDNWPKI 437
            D     
Sbjct: 428 MDQIAHA 434


>gi|304321764|ref|YP_003855407.1| rhizobiocin secretion protein rspE [Parvularcula bermudensis
           HTCC2503]
 gi|303300666|gb|ADM10265.1| rhizobiocin secretion protein rspE [Parvularcula bermudensis
           HTCC2503]
          Length = 436

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 67/424 (15%), Positives = 157/424 (37%), Gaps = 8/424 (1%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            S++   ++  +G  G   WS L  ++  V++SG ++ + +  +++    GII++  V  
Sbjct: 14  RSIRISAIVCAVGFGGFFLWSALAKLDEGVTASGVLVVQSDRKQVQHLEGGIIRELHVRE 73

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +++G  L+  E +++    D     +      +      L  L         +    
Sbjct: 74  GETVVEGDVLVVLEPLQSETARDEIAQEMAANLAAVLR----LTALKTGEATPNFSRIDN 129

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                    +  ++   +FN   ++    L +   +  ++     +L N+ +  R  L +
Sbjct: 130 LAIGQSVRTEIVASQLALFNQQRAAQQARLDLLTQQEATLSGRVRELSNQLAATRRALEA 189

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++DL + + L E+   +  +++   R V +   +      EQ      I  +  E    
Sbjct: 190 AREDLVLRQQLLEERLETAGNVSAIRREVARLEADYSRLRGEQSEARESIQTVAREKAQT 249

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A++ + I   L + Q  +     +L+ L+    +  + +P +G ++  +  +       
Sbjct: 250 EADFQEGIGGQLVEAQGLYLAARERLSALDDRLARTVVRAPESGIVLNLEYSTVGGVLSP 309

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              LM+IVP +       +V P     V+ G     +   Y           + K+   +
Sbjct: 310 GGMLMEIVPVTDNLVASVRVMPTDRDAVEPGQEVRAKLTAYKSFLVPDLAGEVMKVSADL 369

Query: 375 SQQDNNLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAK-NTTLAQEIIHPITD 432
            Q +       YYE  +++      +    +L  G P E    +  + T    ++ PI  
Sbjct: 370 KQDE--ATGAVYYEAEVRLDASDVEAKTRFDLLPGMPVETFIASGTSRTFLDYVLEPIFS 427

Query: 433 NWPK 436
            + +
Sbjct: 428 TFQR 431


>gi|89902529|ref|YP_525000.1| Type I secretion membrane fusion protein HlyD [Rhodoferax
           ferrireducens T118]
 gi|89347266|gb|ABD71469.1| Type I secretion membrane fusion protein, HlyD [Rhodoferax
           ferrireducens T118]
          Length = 471

 Score =  282 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 59/426 (13%), Positives = 146/426 (34%), Gaps = 15/426 (3%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W  L++  P   KR+  L+ + ++ ++ W+    I+        ++    V  I+S   G
Sbjct: 51  WARLQQ-EPLRAKRLLRLAAVALLVMVIWAAFAQIDEVTRGEARVVPTSQVQIIQSVDGG 109

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +++   V  G  +  G  +L  +       +   +V    L+  +   ++          
Sbjct: 110 VVEALLVHEGQIVEAGQLMLRVDPTRFVSNMLESRVGQLALQAKVLRLEALTRGTAFNPP 169

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                      +L+       +   +++    + +     +   ++        ++  + 
Sbjct: 170 ----------AELMRDAPDVVAQEMRLYESRRAEINAQTFISQNQLVQRQQELNEVRARR 219

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                 L    K++   + +    AVS+ ++ + ER V     +  +   +   +   I 
Sbjct: 220 DQAVRSLELMTKEINATRPMIATGAVSEVEVLRLERQVAGLRGDSEQATAQISRVQSSIL 279

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   +          ++S +L       A        L+   +   I SP+ GT+     
Sbjct: 280 EATRKIEEVQLTSRNQMSAELSDAMSKLASLSQGGLALQDKVKHADIKSPVRGTVKRLLV 339

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     Q  + ++++VP      +  ++TPK I  ++    ATV+F  Y         A
Sbjct: 340 NTVGAVVQPGKEVVEVVPLDDTLILEVQITPKDIGFLRPEQEATVKFSAYDFSIYGGLTA 399

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            +  I       +   +   +Y V ++    +    ++ +  G  A+V       T+   
Sbjct: 400 DVVNIGADSVLDE---KGNAFYHVRVRTRKSSLGP-SLPVIPGMVAQVDILTGKKTVLSY 455

Query: 426 IIHPIT 431
           ++ P+ 
Sbjct: 456 LLKPVL 461


>gi|319637887|ref|ZP_07992653.1| membrane spanning export protein [Neisseria mucosa C102]
 gi|317401042|gb|EFV81697.1| membrane spanning export protein [Neisseria mucosa C102]
          Length = 409

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 154/442 (34%), Gaps = 70/442 (15%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +   L++   +    + +L  I ++  + W+   P+E     +G I+       I+S 
Sbjct: 16  NDLNAALQKEKHSGQFWVIILFFIFLVVFVIWAYNSPVEEVTRGNGNIIPSSREQVIQSL 75

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFL 120
             GI+ +  V+ G  + +   L+  +D  ++ ++   +  ++NL   +   K+      L
Sbjct: 76  DPGIVTEIMVKEGDMVEKDQILMKLDDTRSSAVLRESEAKVENLEATVARLKAEAYGAKL 135

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +    V     E R  ++  +  +  +    V                            
Sbjct: 136 SFPDSV---GPELRRREIAAYKARRQAMTDAV---------------------------- 164

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                S L    ++  +++ +   +  +  VS+ +L +  R     + +L   I E++N 
Sbjct: 165 -----SGLSQSKAALDREIAITAPMVAEGVVSEVELLRMRRE----SADLATQISERRN- 214

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                            Y  + + +L Q +   A     + +     E+  I +P+ G +
Sbjct: 215 ----------------RYKADANNELLQAESELAQSKENVAMRADPVERSQIRAPMRGIV 258

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              +  +        + +M+IVP      + A + P+ I  ++ G  A V+   Y     
Sbjct: 259 KGIKVTTIGGVVNAGEDIMQIVPVDDKLLVEAYIRPQDIAFIRTGQPALVKVSAYDYSIY 318

Query: 361 KKFKAIIEKIDPIISQQDNNLQT--------QEYYEVILKITDLAFSDNN---IELRNGF 409
              +  +  +           +         Q YY V+++  + +  D N   + +  G 
Sbjct: 319 GGLEGKVTLVGADTVSNSMQNRANDLKLDPNQVYYRVLVQTENNSLKDKNGKPMPIIPGM 378

Query: 410 PAEVLFTAKNTTLAQEIIHPIT 431
            A V       T+ Q +I PIT
Sbjct: 379 VATVDIKTGEKTIFQYLIKPIT 400


>gi|115345650|ref|YP_771831.1| HlyD family secretion protein [Roseobacter denitrificans OCh 114]
 gi|115292971|gb|ABI93423.1| HlyD family secretion protein [Roseobacter denitrificans OCh 114]
          Length = 437

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 144/442 (32%), Gaps = 16/442 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             +   L          + L++++G +G   W+    I  +V + G+ +   N  +++  
Sbjct: 8   DDLTLRLSMRSVFLAGLIGLVALLGGVGF--WAGTTLINGAVIAQGQAVVRGNAKQVQHL 65

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDF 119
             GI+    V++G  +  G  L+  +       +D+ +  + +    +  +  E+  L  
Sbjct: 66  DGGIVADILVQDGDGVQAGDVLIRLDPTLVRMNLDVTRQRLADALTQQARLRAEQQGLGT 125

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           L   Y  L              +    +    +F    +             R       
Sbjct: 126 LTFVYPDLPFEMPD--------MAANEAGQRAIFTARAAVQTGGRDQLAEAFRQFENQIE 177

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L ++   + A +    KDL  M+ L E+N   Q+ LN   R              +   
Sbjct: 178 GLTSQMEAISAQIGFVSKDLDNMQVLVERNLARQSQLNDLNRTRADLEGRRAALASDIAQ 237

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           +     E   +      ++ + +  DL        + +  +       ++  I +P AG 
Sbjct: 238 LSNARREAEIQTLQSERSFQESVVTDLRTITSQVDELILDIVTRAAQLDRINIRAPAAGI 297

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +   Q  +        Q + +I+P  +      +V P+ I  V  G  A      +    
Sbjct: 298 VHELQISTVGGVIDPGQVIAEIIPQDQALDFELRVQPQDIDQVYIGQEAETLIAAFDVNE 357

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
             K    + +I P      +    Q YY + L +     +    + ++ G P E      
Sbjct: 358 TPKLIGSVARISPNAI--VDPQTGQSYYLINLTVPAEEIARLGGLRIKPGMPVEAYLATG 415

Query: 419 NTTLAQEIIHPITDNWPKIFER 440
             T+   +I P+T    + F +
Sbjct: 416 ERTVLGYLISPVTTQMRRAFRQ 437


>gi|127511445|ref|YP_001092642.1| HlyD family type I secretion membrane fusion protein [Shewanella
           loihica PV-4]
 gi|126636740|gb|ABO22383.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           loihica PV-4]
          Length = 441

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 173/439 (39%), Gaps = 16/439 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H F           +++R+T      +  L+ WSI   IE    + G+++   +   I+S
Sbjct: 14  HEFTEAVEAPAEKRAIRRITFFIATAVFILLIWSIFTNIEEIAKAKGQVVPLGHRQVIQS 73

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G +    V  G  + +G  +  F   ++  L +  +    NL   I+   + L+   
Sbjct: 74  QTGGTLASIAVAEGDLVQKGDLIANFVATDSQALKEELQSKQANLELKIERYTAFLEERE 133

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
             ++  +  F +   Q ++ L + +     +     S V +S                 +
Sbjct: 134 PDFNAYQLGFPALVAQHINALARMNQEKQAIIALSESDVAKS-----------EAELASV 182

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E + + L+  + S ++ L MM ++ E+ AVS+  + + ++ +     EL+     +  + 
Sbjct: 183 EQEITPLKDQIRSVEQTLKMMNSVKEQQAVSKLRMLESQQKLDAYIRELKVLEGRRSVLQ 242

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R+I+    +   + A+   E+       Q      +++L   +   +Q  + SP+ G I 
Sbjct: 243 RNIDNQEKQLAQKQASLFNEVGEKRTDAQAELLGIVARLKSSDSLVQQNRVTSPVDGIIQ 302

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              + S+ +  Q    +  IVP +    + AK++P+ I  V  G  A ++   +   R  
Sbjct: 303 SIPNNSAGSVIQPGGTVAVIVPTTPTALLEAKLSPRDIGFVTVGQKARIKIDAFDYSRYG 362

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKN 419
               +++KI P     +   +   +Y+V + I    F D  + + L  G   E      +
Sbjct: 363 AIDGLVKKISPSTDADE---KGGVFYKVQIAIDKPYFGDQPDKLALIPGMTGEADIVTGD 419

Query: 420 TTLAQEIIHPITDNWPKIF 438
            T+ Q +  P+  N  + F
Sbjct: 420 KTVFQYLWKPVFTNVTEAF 438


>gi|149186449|ref|ZP_01864762.1| secretion protein, HlyD family [Erythrobacter sp. SD-21]
 gi|148830038|gb|EDL48476.1| secretion protein, HlyD family [Erythrobacter sp. SD-21]
          Length = 451

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 68/431 (15%), Positives = 158/431 (36%), Gaps = 16/431 (3%)

Query: 13  HPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            P    +     I+    LI  W+    I+ +V   G ++    +  + S   G++++  
Sbjct: 32  EPGKASKFLFWGIVAFFVLIIGWAAWAEIDRTVRGMGRVIASSELQVVSSLEGGVLEEIL 91

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G +++ G PLL  +  ET   +   + +   L   +    + +   + +Y       
Sbjct: 92  VRPGDEVIAGQPLLRLDPTETGASLGSTEATALALDMKVARLTAEVTGRSPRYPAPANDE 151

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +R+ ++             ++    +++  +L     +++    +  + E   +  ++ 
Sbjct: 152 AARQLEI----------EKALYASRQANLSSALSAGQAQLQRSRQSVAEAEAAIASRQST 201

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+  + +L  ++ L E     +  L + E     +  +L             + E     
Sbjct: 202 LTRTESELAAIRPLVENGIEPRMSLTRAESDAASARSDLAGARAALGRTQAQVAEAGANL 261

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                ++ ++ + +L   Q  +    S L  L++  ++ T+ +P+ G +      +  + 
Sbjct: 262 ARIRQDWREQAASELAGAQAEYEARASTLPALQERFQRTTLRAPVGGKVSRVLVTTRGSA 321

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               +PL+++V       + A+++P+ I +V+ G  A V    Y        +  +  I 
Sbjct: 322 VNPGEPLVELVAQEDSLLVEARISPQDIGNVRIGQKAKVGVTAYDQTVYGALEGEVSTIS 381

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIH 428
           P   Q       + YY V +     A    N   + +  G  A+V       T+ Q I+ 
Sbjct: 382 PDSIQD--PQSGEIYYLVRVTTQQSAIEGPNGMELAIGPGMVADVSLLGDKRTVLQYILT 439

Query: 429 PITDNWPKIFE 439
           PIT      F 
Sbjct: 440 PITRLSETAFR 450


>gi|331681636|ref|ZP_08382269.1| membrane spanning export protein [Escherichia coli H299]
 gi|331080838|gb|EGI52003.1| membrane spanning export protein [Escherichia coli H299]
          Length = 387

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 70/437 (16%), Positives = 157/437 (35%), Gaps = 64/437 (14%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            +   L++    +L  M +  ++ ++  + W+   P++      G I+       I++  
Sbjct: 3   DVQAALQQEKHHALFLMVIFLLVLVVTFVIWAWNSPLDEVTRGQGSIIPGSREQVIQTLD 62

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI+K  +V  G  + +G  LLT +D  ++ ++   +  + NL       ++        
Sbjct: 63  PGILKTLEVREGDIVEKGQVLLTLDDTRSSAMLRESEARVNNLEAVRARLRAEA------ 116

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                   + S  F   + +  R  +  + R+R     + +L  
Sbjct: 117 -----------------------YSESLTFPDDVPADLRERESTVYRLR-----KTELAQ 148

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + L+   +   K++ M + +  + A+S+ +L + +R                      
Sbjct: 149 SIAGLKQSKALLDKEIAMTRPIVREGAMSEVELLRMQR---------------------Q 187

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             EL  + + +   YL E   +L + +   A     +       E+  I +P+ G +   
Sbjct: 188 SAELQLQMDEKQNKYLTEAGAELVKTEAELAQAKENMAGRADPVERSRIRAPLRGIVKNI 247

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +        Q +M+I+P      I A + P+ + +V+ G  A V+   Y        
Sbjct: 248 RVNTLGGVVSAGQDIMEIIPLEDQLLIEAYINPRDVAYVRTGMPALVKLTAYDYAIYGGL 307

Query: 364 KAIIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAEVL 414
             ++  + P   +             + YY V++  ++   +D N   + +  G  A V 
Sbjct: 308 DGVVTLVSPDTLRDQKRPGDLKLDPNEAYYRVLVTTSNNYLTDRNGKILPVIPGMIASVD 367

Query: 415 FTAKNTTLAQEIIHPIT 431
                 ++ Q +I PIT
Sbjct: 368 IKTGQKSVFQYLIKPIT 384


>gi|261379933|ref|ZP_05984506.1| protein secretion ABC efflux system, membrane fusion protein
           [Neisseria subflava NJ9703]
 gi|284797643|gb|EFC52990.1| protein secretion ABC efflux system, membrane fusion protein
           [Neisseria subflava NJ9703]
          Length = 409

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 68/442 (15%), Positives = 154/442 (34%), Gaps = 70/442 (15%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +   L++   +    + +L  + +I  + W+   P+E     +G I+       I+S 
Sbjct: 16  NDLNAALQKEKHSGQFWVIILFFLFLIVFVVWAYNSPVEEVTRGNGNIIPSSREQVIQSL 75

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFL 120
             GI+ +  V+ G  + +   L+  +D  ++ ++   +  ++NL   +   K+      L
Sbjct: 76  DPGIVTEIMVKEGDMVEKDQILMKLDDTRSSAVLRESEAKVENLEATVARLKAEAYGTKL 135

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +    V     E R  ++  +  +  +    V                            
Sbjct: 136 SFPDSV---GPELRRREIAAYKARRQAMTDAV---------------------------- 164

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                S L    ++  +++ +   +  +  VS+ +L +  R     + +L   I E++N 
Sbjct: 165 -----SGLSQSKAALDREIAITAPMVAEGVVSEVELLRMRRE----SADLATQISERRN- 214

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                            Y  + + +L Q +   A     + +     E+  I +P+ G +
Sbjct: 215 ----------------RYKADANNELLQAESELAQSKENVAMRADPVERSQIRAPMRGIV 258

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              +  +        + +M+IVP      + A + P+ I  ++ G  A V+   Y     
Sbjct: 259 KGIKVTTIGGVVNAGEDIMQIVPVDDKLLVEAYIRPQDIAFIRAGQPALVKVSAYDYSIY 318

Query: 361 KKFKAIIEKIDPIISQQDNNLQT--------QEYYEVILKITDLAFSDNN---IELRNGF 409
              +  +  +           +         Q YY V+++  + +  D N   + +  G 
Sbjct: 319 GGLEGKVTLVGADTVSNSMQNRANDLKLDPNQVYYRVLVQTENNSLKDKNGKPMPIIPGM 378

Query: 410 PAEVLFTAKNTTLAQEIIHPIT 431
            A V       T+ Q +I PIT
Sbjct: 379 VATVDIKTGEKTIFQYLIKPIT 400


>gi|300716390|ref|YP_003741193.1| type I secretion membrane fusion protein, HlyD family [Erwinia
           billingiae Eb661]
 gi|299062226|emb|CAX59343.1| Type I secretion membrane fusion protein, HlyD family [Erwinia
           billingiae Eb661]
          Length = 411

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 70/437 (16%), Positives = 152/437 (34%), Gaps = 60/437 (13%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M+      L +  P S   + +   + I+G I+W+    +E       +I++  +   I+
Sbjct: 20  MNDIQSSLLSQKTPGSHLVLVIFIAV-IVGFISWAHFARVEEITKGEAKIVSRSHEQVIQ 78

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI+    V  G ++ +G  LL  +              +  L+  I   ++     
Sbjct: 79  SLEGGILATMDVHEGQEVKRGEVLLKIDPTRAQASYRETLNKVLGLKGTIARLRAEA--- 135

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                ++      ++  +++   K ++      +  IS++ RS                 
Sbjct: 136 -YGQPLVFDEQVQKDPAVIEQETKAYNARKAALHDAISALQRS----------------- 177

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                           +++ M + L ++  +S+ ++ + +R       +L+  I E++N 
Sbjct: 178 -----------FDLSMREIKMSQPLADRGLLSEVEMLRMQRQAN----DLQSQIVERRN- 221

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                            Y  E + DL + +   +     L       E+ TI +P+ GT+
Sbjct: 222 ----------------RYQAEANADLNKLELELSQTSENLIGRADVMERTTINAPVNGTV 265

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              +  +     Q  + +M+IVP      + AK+ P  +  +  G  AT++   Y     
Sbjct: 266 KNIRVNTIGGVIQPGEHIMEIVPSEDQLLVEAKIRPSDVAFLHPGLPATIKITAYDYAIY 325

Query: 361 KKFKAIIEKIDPIISQQD----NNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVL 414
              K  +E I P   + D           YY V++          +  + +  G  A V 
Sbjct: 326 GGLKGKVELISPDTIKDDAKTAAGRPDDTYYRVMVLTDSSTLNVGNKQLPIIPGMVASVE 385

Query: 415 FTAKNTTLAQEIIHPIT 431
                 T+ + ++ P+ 
Sbjct: 386 IRTGEKTILEYLLKPVF 402


>gi|240947985|ref|ZP_04752406.1| type I secretion membrane fusion protein [Actinobacillus minor
           NM305]
 gi|240297700|gb|EER48169.1| type I secretion membrane fusion protein [Actinobacillus minor
           NM305]
          Length = 426

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 72/438 (16%), Positives = 153/438 (34%), Gaps = 64/438 (14%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +   L++ +  S+          ++  + W+   PI+      G I+       I+S 
Sbjct: 35  NDLNAALQQENHHSIFATISFFFALMVIFVIWAYNSPIDEVTRGQGSIIPNSREQVIQSL 94

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GI+K+  V+ G  + +G  LL  +D  ++ ++   +  ++NL                
Sbjct: 95  DPGILKEMLVKEGDTVEKGQVLLKLDDTRSSAILRESQAKVENLEA-------------- 140

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                          L   L         VF+  I +  +  +  +   R     +  L+
Sbjct: 141 ---------------LSARLQAEAYGTPLVFSEKIPASLQERERIIYEKR-----KTSLQ 180

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              + L+   +   +++ + + +  K AVS  +L + +R      L++ E          
Sbjct: 181 ESLASLQNSKNLLDREIRITEPIVAKGAVSAVELLRMKRQSTDLQLQMVE---------- 230

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                          Y+ + S +L + +   +     + +     E+  I SP+ G +  
Sbjct: 231 -----------RKNKYVTDASAELTKIEAELSQARENMAMRADPVERSLIRSPLKGIVKN 279

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +        Q +M+IVP      + A ++P  + +V+ G TA V+   Y       
Sbjct: 280 IRINTIGGVISAGQDIMEIVPIEDTLLVEAYISPSDVAYVRPGMTALVKLTAYDYAIYGG 339

Query: 363 FKAIIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAEV 413
            +  +  + P                 + YY V++K      +D +   + +  G  A V
Sbjct: 340 LEGTVTLLSPDTLHDQKRPSDLKLNPNEAYYRVLVKTEGSHLTDKDGKVMPIIPGMIASV 399

Query: 414 LFTAKNTTLAQEIIHPIT 431
                  T+ Q +I PIT
Sbjct: 400 DIKTGQKTVFQYLIKPIT 417


>gi|167648768|ref|YP_001686431.1| HlyD family type I secretion membrane fusion protein [Caulobacter
           sp. K31]
 gi|167351198|gb|ABZ73933.1| type I secretion membrane fusion protein, HlyD family [Caulobacter
           sp. K31]
          Length = 456

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 66/430 (15%), Positives = 140/430 (32%), Gaps = 12/430 (2%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +K   L+++      + WS +  ++ +  + G I    +   ++    GI+    V+ G 
Sbjct: 30  IKAGALIALAFFGVFLGWSFIAHLDAAAVAQGSISVAGHRQTVQHKDGGIVSAIYVKEGQ 89

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            +  G  L+     +   L          ++  R  +  E+  L  +    +        
Sbjct: 90  HVKAGQVLIDLAPADVEALERSMAAQVIGLQAQRARLYAERLGLSSMEAPAEFASLTGYD 149

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +EE       +           G  +V     +   R   I         ++        
Sbjct: 150 KEEA-----DRALKMQQIELMAGRRAVGGQKAVLAQRSAQISRQIEGFTQQARSTDDQSR 204

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               +L   ++L  K   S N +   ER          E           I E   +A  
Sbjct: 205 LINDELQGTRDLAGKGYASVNRVRALERTAAGLAGSRAELDANAARAREQIGETRMQAAS 264

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             ++  +++++++   +    D + KL  L++     +I +P  G +V    F+      
Sbjct: 265 LDSDRAEQVAKEMRDVEFQLNDLLPKLRALKEQLAGTSIRAPATGQVVGLTIFTVGGVIA 324

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q L+ IVP      I A+V P     +  G    V+     D +    K  + ++   
Sbjct: 325 PGQHLLDIVPDMAPLVIEAQVNPSDAGDLYVGQETEVKIASLHDRQIPILKGELTRVSAD 384

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFTAKNTTLAQEIIHP 429
               + +       EV + ++ L           +L+ G P +++   +  T  Q +  P
Sbjct: 385 SFTDEKSGARYFTAEVTVPVSQLQTLSTKTGAVYKLKPGLPVQIMVPLRKRTAFQYLTEP 444

Query: 430 ITDNWPKIFE 439
           +T    + F 
Sbjct: 445 LTSALWRSFR 454


>gi|170698868|ref|ZP_02889929.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria IOP40-10]
 gi|170136191|gb|EDT04458.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria IOP40-10]
          Length = 459

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 57/423 (13%), Positives = 141/423 (33%), Gaps = 18/423 (4%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
             +G+  +  W+ L P+  +V + G +  E     ++    GI+K+  + +G ++  G  
Sbjct: 43  VAVGLGLMWGWAALAPLSGAVVAEGAVRTEGERKTVQHLEGGIVKEILIRDGDRVKAGQV 102

Query: 84  LLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           L+  +++     +   +      +     +  E+   + L+    +  +  + R  +LL 
Sbjct: 103 LIVLDNVGPAAELSALQAQSDSEQARIARLSAERELKETLSFPATLESRRNDPRVAELL- 161

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                 +  S +F     +      M  T +                +       ++   
Sbjct: 162 ------ARESSLFIARRRAFVDQSTMLRTELAQTRQEIAISAQLIQTMNRSYDMARQQRR 215

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             + L ++  V++  +   +R    +   ++    +     +   +L          Y+K
Sbjct: 216 TNETLHQEGFVAETKVLDLQRTEADALSRVQSGSADLSRAKQRQTDLELRIAGLRHEYVK 275

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
               +L++          +L        +  + +P+AG IV  +  +        +P++ 
Sbjct: 276 TADDELKEAATRAIQIGERLRPARDQSARTRVTAPVAGVIVGLKVHTIGAVIAPREPIVD 335

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +VP +    + A + P  ++ +  G  A VR   Y           +  I        + 
Sbjct: 336 VVPENAPLIVEANIRPDDVREIAPGSHADVRLTAYNSRTTPMLDGKVTYISADALIDSDK 395

Query: 381 LQTQEYYEVILKITDLAFSDNN------IELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
                +Y V +++   A +  N      + L  G   EV       +    ++ P+ D  
Sbjct: 396 RT--RFYVVRVEVPAHALAKANRLAKESVALGPGLRTEVYIRTHARSAFDYLLEPVRDGI 453

Query: 435 PKI 437
            K 
Sbjct: 454 RKS 456


>gi|261339758|ref|ZP_05967616.1| LapA secretion membrane fusion protein [Enterobacter cancerogenus
           ATCC 35316]
 gi|288318590|gb|EFC57528.1| LapA secretion membrane fusion protein [Enterobacter cancerogenus
           ATCC 35316]
          Length = 391

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 74/445 (16%), Positives = 141/445 (31%), Gaps = 59/445 (13%)

Query: 1   MHHFMWKNLKRNHPA--SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE 58
           M+     N +   P       +       +   I W+ L  ++   + SG+++   +   
Sbjct: 1   MNDLTRYNSRLKEPRLPRSTLVAWSLFALLAAFIIWASLFQLDEVTTGSGKVIPSSHEQV 60

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I+S   GII    V  G  + +G  L   +  +T   +   +  +           +   
Sbjct: 61  IQSLEGGIIHSLLVREGDIVERGQQLAQLDRTKTESSVLESESRLNAALATAARLNAE-- 118

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +NN   V     +   E +      Y S                              R
Sbjct: 119 -VNNTALVFPDELDDDVELVKQETALYQS-----------------------------RR 148

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             LE   + LR      Q++L + + L  + A S+ ++ + ER       EL   I E K
Sbjct: 149 ESLEKGLAGLRQGAELVQRELALTRPLVTQGAASKVEVLRLERQ----KNELESKITEMK 204

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           N                  Y      +L +       + S +   E +  + T  +P+ G
Sbjct: 205 N-----------------QYYVRAREELSKANAEIEAQRSVMKGREDSLTRLTFNAPVRG 247

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +      +       +  LM +VP      I AK++P+ +  +  G  A V+   Y   
Sbjct: 248 IVKDIDVTTVGGVIPPNGKLMSLVPLDDQMVIEAKISPRDVAFIHPGQKALVKITAYDYS 307

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLF 415
                +  +  I P   Q +   +   YY V ++      ++       +  G  A V  
Sbjct: 308 IYGGLEGEVTMISPDTLQDEV-KRDMYYYRVYIRTDSNHLTNKQGKEFPVFPGMIATVDI 366

Query: 416 TAKNTTLAQEIIHPITDNWPKIFER 440
              + T+   ++ P+      + ER
Sbjct: 367 KTGSKTIMDYLLKPLNKAKEALRER 391


>gi|13472323|ref|NP_103890.1| metalloprotease transporter [Mesorhizobium loti MAFF303099]
 gi|14023069|dbj|BAB49676.1| metalloprotease transporter [Mesorhizobium loti MAFF303099]
          Length = 440

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 72/432 (16%), Positives = 160/432 (37%), Gaps = 11/432 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N++R   A      LL    +     W++  P+  +V + G I      + I+ P  GII
Sbjct: 16  NIRRVAFAGYAATALL----VGCFGYWAVSAPLSGAVITQGTISATGGNILIQHPEGGII 71

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           +   V +G ++ Q   L+  +       ++     +      +    + L+   +  D L
Sbjct: 72  EALLVHDGDRVQQAQDLIVLDPTAAQAELN----RLTRQSIALRAAAARLEAERDGLDRL 127

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
               +     L            K F+  ++       +   R+     + + L+++   
Sbjct: 128 APITKPAPASLQADFEALIREQQKEFDARLARFRSEQSILAQRVAMHRQSVVGLQSQKEA 187

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           ++      +K+L +   L +K   ++ + +Q  R       +              I E 
Sbjct: 188 VQQQAEIVKKELGIKTGLLDKGLTNRTEYSQLLRSEADLVGQAGALEANLAAANTQIVEA 247

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            ++        ++E    L++ +   AD   ++   E    + TI +P AG +V +   +
Sbjct: 248 QEQIERLTTQRVEEALTKLDEVRSNLADVEEQIRAAEAVLRRTTIKAPAAGIVVSSTYNT 307

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             +   + + +M+I+P +    + A++ PK +  V+ G  A +R          +  A +
Sbjct: 308 KGSVIARGEKIMEILPTAPGLIVDARLRPKDVDQVRVGQPAKLRLSALNMRLTPEVSATV 367

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKI-TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            +I       +     + Y+ V L+I  DL       +L  G P E      + T  + +
Sbjct: 368 AQISADRLIDEATH--EPYFRVKLRIAADLPPGVKPGQLYPGTPVEAFINTGDRTFFEYL 425

Query: 427 IHPITDNWPKIF 438
           + P+ D++ + F
Sbjct: 426 VRPMLDSFARAF 437


>gi|146329021|ref|YP_001209458.1| type I secretion membrane fusion protein [Dichelobacter nodosus
           VCS1703A]
 gi|146232491|gb|ABQ13469.1| type I secretion membrane fusion protein [Dichelobacter nodosus
           VCS1703A]
          Length = 421

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 76/447 (17%), Positives = 159/447 (35%), Gaps = 50/447 (11%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +   L+      L     L +  +   + W+    +E      G ++       I+S 
Sbjct: 16  NDLSAALQVERHTGLWLGIFLLMTLVGAFLFWAYHSDLEEVTVGQGAVIPSSREQLIQSL 75

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GI+    V+ G  + +  PLL  +D  ++ L+   +  +++L   +   +S       
Sbjct: 76  DGGILNALYVKEGQLVEKDQPLLKMDDTRSSALLRESQAKVESLTAMLTRYRSE------ 129

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                  A++   +   D   +     +  F  G +++                    LE
Sbjct: 130 -------AYDEPLQFSSDLSAEIRQRETSAFQAGKNALQA--------------KTEGLE 168

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                L+  L      +T M+ + ++   SQ              LEL     +Q+ +  
Sbjct: 169 KSIIFLKKSLDFLNDQVTRMEAMVKRGVASQ--------------LELSRMQQQQQEISN 214

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I  LY++ N   A YLKE + +L +     A  +  +        +  I SP+ G +  
Sbjct: 215 QIQSLYNQINDARALYLKEANENLVRTDSELAQALENVARYADPVARSEIRSPVRGIVNN 274

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +        + +M+IVP  +   ++A + P+ +  +  G +A V+   Y       
Sbjct: 275 IRINTVGGVINAGEEIMEIVPIDETLLVQAYIRPQDVAFIHPGQSAVVKLSAYDYSVYGG 334

Query: 363 FKAIIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAEV 413
            +  +  + P   + + +         Q YY V+++      +D N   + +  G  A V
Sbjct: 335 LEGKVTLLSPDTLKDERSRSQLNLDANQSYYRVLVETHGSKLTDKNGEELPIIPGMIATV 394

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIFER 440
                  T+ + +I P+T     + ER
Sbjct: 395 DIKTGTKTVFEYLIRPVTRMKQALRER 421


>gi|212637284|ref|YP_002313809.1| HlyD family secretion protein [Shewanella piezotolerans WP3]
 gi|212558768|gb|ACJ31222.1| HlyD family secretion protein [Shewanella piezotolerans WP3]
          Length = 441

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 82/424 (19%), Positives = 172/424 (40%), Gaps = 16/424 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +KR+  L    ++ ++ WS+   +E    S G+++   +   I+S   G I    VE G 
Sbjct: 29  IKRIIFLITGSVLIMLLWSLFAQVEEISKSKGQVVPLGHRQIIQSRTGGTIASVMVEEGD 88

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L +F  I++    +       NL   I+  ++ +D     +   E  +    +
Sbjct: 89  VVKKGDVLASFVSIDSQSAEEELASKRANLVLRIERYEAFIDQREANFVEFELEYPQLVK 148

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                L + +     +     S + +S                 L+ +   L   + + +
Sbjct: 149 LHTASLSRMNQERLAMQQLSESDIAKS-----------QAEIDGLKAEIPPLSDQIETAK 197

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           + L MM+++ E+ AVS+  + + ++ +     EL+    +Q+ + +++  L  +   + A
Sbjct: 198 QTLKMMRSVTEEQAVSKLRILESQQKLDSYMRELKSMESKQQVLSKNLLNLEQQLKQKQA 257

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             LKE+  +    Q      +++L        Q T+ +P+ G I    S S+ +  Q   
Sbjct: 258 TLLKEVGEERTNAQAELLGIIARLKSSGSLVSQNTVTAPVDGIIQSIPSSSTGSVIQPGG 317

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +  IVP +K   + AK++P+ I  VK G    ++   +   R      I+++I P    
Sbjct: 318 TVAVIVPMTKTGLMEAKLSPRDIGFVKVGQPVRIKIDAFDYSRYGALDGIVKRISPSTDS 377

Query: 377 QDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            +   +   +Y+V + I    F+D     +L  G   E      + T+ Q +  P+  N 
Sbjct: 378 DE---KGGVFYKVQISIDKPYFADKPGQFDLIPGMTGEADIVTGDKTVFQYLWKPVFTNV 434

Query: 435 PKIF 438
            + F
Sbjct: 435 TEAF 438


>gi|313110585|ref|ZP_07796468.1| putative secretion protein [Pseudomonas aeruginosa 39016]
 gi|310882970|gb|EFQ41564.1| putative secretion protein [Pseudomonas aeruginosa 39016]
          Length = 395

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 68/421 (16%), Positives = 145/421 (34%), Gaps = 61/421 (14%)

Query: 16  SLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            + R  L +++G ++  I W+    ++      G ++    + +I+S   GI+ +  V+ 
Sbjct: 24  PVYRPLLWTLLGCVLLFIGWAAWAQLDEVTRGDGRVVPFSRIQKIQSLEGGILDRLLVKE 83

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAF 131
           G  +  G PL+  ++                LR     +D E      +    DV  +  
Sbjct: 84  GDLVEVGQPLVRLDETRFLTNFQESANQASVLRAAIARLDAEVLGRKSIEFPPDVDPEGP 143

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +R E       +   +       G  ++ R +                           
Sbjct: 144 LARSE------RELFKSRRDKLVEGTQAIQRQIH-------------------------- 171

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               Q  L +++ L  K AVSQ +            L+L ++I      L  +       
Sbjct: 172 --LAQSQLDLVRPLVAKRAVSQME-----------ALKLSQDIATLSGKLTELKST---- 214

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 Y ++   +  Q +   +     +   +    +  ILSP+ G +      +    
Sbjct: 215 ------YFQDAYTERAQRKADLSALEPIVQQRQDQLRRTEILSPVRGRVNTVLINTRGGV 268

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  +P+M+++P  +   + AK+ P+ +  +  G  A V+   Y        K  +E+I 
Sbjct: 269 IQPGEPIMEVIPVEERLLVEAKIKPRDVAFLVPGMPAKVKITAYDYTIYGDLKGTLEQIS 328

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHP 429
               ++D     + YY+V++K            + +  G  AEV   +   ++   ++ P
Sbjct: 329 ADTIEEDTPHGKESYYQVLIKTDGSQLKRGEEVLPIIPGMVAEVDILSGKRSVLNYLLRP 388

Query: 430 I 430
           +
Sbjct: 389 L 389


>gi|15597074|ref|NP_250568.1| secretion protein [Pseudomonas aeruginosa PAO1]
 gi|107101311|ref|ZP_01365229.1| hypothetical protein PaerPA_01002345 [Pseudomonas aeruginosa PACS2]
 gi|218892165|ref|YP_002441032.1| putative secretion protein [Pseudomonas aeruginosa LESB58]
 gi|254234971|ref|ZP_04928294.1| hypothetical protein PACG_00849 [Pseudomonas aeruginosa C3719]
 gi|9947867|gb|AAG05266.1|AE004613_11 probable secretion protein [Pseudomonas aeruginosa PAO1]
 gi|126166902|gb|EAZ52413.1| hypothetical protein PACG_00849 [Pseudomonas aeruginosa C3719]
 gi|218772391|emb|CAW28173.1| probable secretion protein [Pseudomonas aeruginosa LESB58]
          Length = 395

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 68/421 (16%), Positives = 145/421 (34%), Gaps = 61/421 (14%)

Query: 16  SLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            + R  L +++G ++  I W+    ++      G ++    + +I+S   GI+ +  V+ 
Sbjct: 24  PVYRPLLWTLLGCVLLFIGWAAWAQLDEVTRGDGRVVPFSRIQKIQSLEGGILDRLLVKE 83

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAF 131
           G  +  G PL+  ++                LR     +D E      +    DV  +  
Sbjct: 84  GDLVEVGQPLVRLDETRFLTNFQESANQASVLRAAIARLDAEVLGKKSIEFPPDVDPEGP 143

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +R E       +   +       G  ++ R +                           
Sbjct: 144 LARSE------RELFKSRRDKLVEGTQAIQRQIH-------------------------- 171

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               Q  L +++ L  K AVSQ +            L+L ++I      L  +       
Sbjct: 172 --LAQSQLDLVRPLVAKRAVSQME-----------ALKLSQDIATLSGKLTELKST---- 214

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 Y ++   +  Q +   +     +   +    +  ILSP+ G +      +    
Sbjct: 215 ------YFQDAYTERAQRKADLSALEPIVQQRQDQLRRTEILSPVRGRVNTVLINTRGGV 268

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  +P+M+++P  +   + AK+ P+ +  +  G  A V+   Y        K  +E+I 
Sbjct: 269 IQPGEPIMEVIPVEERLLVEAKIKPRDVAFLVPGMPAKVKITAYDYTIYGDLKGTLEQIS 328

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHP 429
               ++D     + YY+V++K            + +  G  AEV   +   ++   ++ P
Sbjct: 329 ADTIEEDTPHGKESYYQVLIKTDGSQLKRGEEVLPIIPGMVAEVDILSGKRSVLNYLLRP 388

Query: 430 I 430
           +
Sbjct: 389 L 389


>gi|241758633|ref|ZP_04756747.1| type I secretion membrane fusion protein [Neisseria flavescens
           SK114]
 gi|241321144|gb|EER57340.1| type I secretion membrane fusion protein [Neisseria flavescens
           SK114]
          Length = 409

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 66/440 (15%), Positives = 155/440 (35%), Gaps = 66/440 (15%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +   L++   +    + +L  + +I  + W+   P+E     +G I+       I+S 
Sbjct: 16  NDLNAALQKEKHSGQFWVIILFFLFLIVFVVWAYNSPVEEVTRGNGNIIPSSREQVIQSL 75

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GI+ +  V+ G  + +   L+  +D  ++ ++   +  ++NL   I   K+       
Sbjct: 76  DPGIVTEIMVKEGDMVEKDQILMKLDDTRSSAVLRESEAKVENLEATIARLKA------- 128

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                         +  D    +  +          + Y++ +  +T             
Sbjct: 129 --------------EAYDIKLSFPDSVGPELRRREIAAYKARRQAMT------------- 161

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           +  S L    ++  +++ +   +  +  VS+ +L +  R     + +L   I E++N   
Sbjct: 162 DAVSGLSQSKAALDREIAITAPMVAEGVVSEVELLRMRRD----SADLATQISERRN--- 214

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                          Y  + + +L Q +   A     + +     E+  I +P+ G +  
Sbjct: 215 --------------RYKADANNELLQAESELAQSKENVAMRADPVERSQIRAPMRGIVKG 260

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +        + +M+I+P      + A + P+ I  ++ G  A V+   Y       
Sbjct: 261 IKVTTIGGVVNAGEDIMQIIPVDDKLLVEAYIRPQDIAFIRAGQPALVKVSAYDYSIYGG 320

Query: 363 FKAIIEKIDPIISQQDNNLQT--------QEYYEVILKITDLAFSDNN---IELRNGFPA 411
            +  +  +           +         Q YY V+++  + +  D N   + +  G  A
Sbjct: 321 LEGKVTLVGADTVSNSMQNRANDLKLDPNQVYYRVLVQTENNSLKDKNGKPMPIIPGMVA 380

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V       T+ Q +I PIT
Sbjct: 381 TVDIKTGEKTIFQYLIKPIT 400


>gi|152984404|ref|YP_001348769.1| putative secretion protein [Pseudomonas aeruginosa PA7]
 gi|150959562|gb|ABR81587.1| probable secretion protein [Pseudomonas aeruginosa PA7]
          Length = 395

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 68/421 (16%), Positives = 145/421 (34%), Gaps = 61/421 (14%)

Query: 16  SLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            + R  L +++G ++  I W+    ++      G ++    + +I+S   GI+ +  V+ 
Sbjct: 24  PVYRPLLWTLLGCVLLFIGWAAWAQLDEVTRGDGRVVPFSRIQKIQSLEGGILDRLLVKE 83

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAF 131
           G  +  G PL+  ++                LR     +D E      +    DV     
Sbjct: 84  GDLVEVGQPLVRLDETRFLTNFQESANQASVLRAAIARLDAEVLGRKSIEFPPDVDPDGP 143

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +R E              ++F      +                        S  ++  
Sbjct: 144 LARSE-------------RELFKSRRDKLLEG---------------------SQAIQRQ 169

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   Q  L +++ L  K AVSQ +            L+L ++I      L  +       
Sbjct: 170 IHLAQSQLDLVRPLVAKRAVSQME-----------ALKLSQDIATLSGKLTELKST---- 214

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 Y ++   +  Q +   +     +   +    +  ILSP+ G +      +    
Sbjct: 215 ------YFQDAYTERAQRKADLSALEPIVQQRQDQLRRTEILSPVRGRVNTVLINTRGGV 268

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  +P+M+++P  +   + AK+ P+ +  +  G  A V+   Y        K  +E+I 
Sbjct: 269 IQPGEPIMEVIPVEERLLVEAKIKPRDVAFLVPGMPAKVKITAYDYTIYGDLKGTLEQIS 328

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHP 429
               ++D     + YY+V++K            + +  G  AEV   +   ++   ++ P
Sbjct: 329 ADTIEEDTPHGKESYYQVLIKTDGSQLKRGEEVLPIIPGMVAEVDILSGKRSVLNYLLRP 388

Query: 430 I 430
           +
Sbjct: 389 L 389


>gi|150376846|ref|YP_001313442.1| HlyD family type I secretion membrane fusion protein [Sinorhizobium
           medicae WSM419]
 gi|150031393|gb|ABR63509.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium medicae WSM419]
          Length = 473

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 68/443 (15%), Positives = 158/443 (35%), Gaps = 27/443 (6%)

Query: 9   LKRNHPASLKRMTLL----SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           L+    + ++R+ +      ++   G   W+    +  +  +SG I+ +     +     
Sbjct: 44  LENETRSPIRRLVIAGLTTILVAFGGFFGWAFSTELSSASVTSGTIIVDSKRKTVSHFEG 103

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLN 121
           G++ +  V+ G  +  G PL+  ED      +   + ++V +      + +E+S L  ++
Sbjct: 104 GVLSRILVQEGDHVAPGQPLMQLEDTRARSDLQALESRRVGLIAKLARLRSERSGLQAVD 163

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              D++     +             +  +  F     +    + ++   +         L
Sbjct: 164 FPDDLVAAGEAA---------ADAVTAETAFFEKRNEAKEGRIAIQRKTIEEYSEKAKSL 214

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
             +       +    +  T +  L EK    ++ L +    +     EL     E     
Sbjct: 215 TAQLQATDRQIELMNEQRTAIATLVEKAFAQRSKLIE----IDARLSELAATRGEIAGDR 270

Query: 242 RHINELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +    A L      +++  EI+ ++   +   A+   ++   +    +  I +P A
Sbjct: 271 AQAEKAMAGAELTLTGIESDFQSEIAGEITTARLELAEVEERIISAKDVLRRLEIRAPQA 330

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q  +  +     QPL+ IVP  +   +   V+ + I  +  G +  +R   Y  
Sbjct: 331 GIVANIQLRTPGSAVTPGQPLLDIVPEDEPLLVEMHVSTRDIDSITIGSSTQIRLTAYNQ 390

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFT 416
                    +  I    S  + +     Y+    +I   + + N +I L  G PAEVL  
Sbjct: 391 RSHLPMDGKVTYIAADQSMDEKSNVA--YFVARAEIAPESLAANPDIRLYPGMPAEVLIV 448

Query: 417 AKNTTLAQEIIHPITDNWPKIFE 439
            K  +    ++ P++D++ + F 
Sbjct: 449 HKARSAIDYLVSPVSDSFNRAFR 471


>gi|83941971|ref|ZP_00954433.1| putative toxin secretion transmembrane protein [Sulfitobacter sp.
           EE-36]
 gi|83847791|gb|EAP85666.1| putative toxin secretion transmembrane protein [Sulfitobacter sp.
           EE-36]
          Length = 438

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 71/444 (15%), Positives = 145/444 (32%), Gaps = 13/444 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M H      K                    L  W+    I  +V ++G+I        I+
Sbjct: 1   MSHHAPPEPKTGLWHITGATMAAMFCLFALLGGWAATTQISGAVIATGQIDVAGKPKVIQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSAL 117
           +   G++ +  V+NG  +  G  L  F+       + + +  +     LR  ++ E+   
Sbjct: 61  TVDGGVLAELPVQNGDIVKAGQVLARFDATILQIDLRMARARLAEAAGLRARLEAERDES 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                    L     + +      + +  +  + +F               + +  +   
Sbjct: 121 PAPRFDAIDLPPKIGALD------MTQAQAGQAAIFEARAQMRAGMRARMASDLADVETQ 174

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              L  + S L   L+    +L  +  L EK    Q  L+Q +        +L     + 
Sbjct: 175 ATGLNGQISALEQQLAILTTELRSLTRLVEKGLAPQVRLSQLQSTRAGLRGDLAARRADL 234

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             ++     L  E+      + ++++  L +      +    +   +   ++  I +P+ 
Sbjct: 235 ARLIHQRWTLKLESLQADRRFQEQVALQLREVTAEVQELTLSILTRQAQLDRIAIRAPVD 294

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   ++ +          LM IVP         +V P+ I  V+    AT+    +  
Sbjct: 295 GMVHELRATTVGAVVGAGATLMDIVPQQSKFEFEVQVDPRSINLVRYDQPATLVLTAFDP 354

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLF 415
               K    +  I P +     N     +Y VIL I  T+L     ++ L  G P E   
Sbjct: 355 HTTPKLTGSVYSISPQVVVDPRN--GGSFYRVILDIPRTELDRLPASVRLVPGMPIEAFL 412

Query: 416 TAKNTTLAQEIIHPITDNWPKIFE 439
             K+ T+   +  PI+    + F 
Sbjct: 413 KTKDRTVLSYLAEPISSQLRRGFR 436


>gi|116049831|ref|YP_791362.1| putative secretion protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115585052|gb|ABJ11067.1| putative secretion protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 395

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 68/421 (16%), Positives = 145/421 (34%), Gaps = 61/421 (14%)

Query: 16  SLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            + R  L +++G ++  I W+    ++      G ++    + +I+S   GI+ +  V+ 
Sbjct: 24  PVYRPLLWTLLGCVLLFIGWAAWAQLDEVTRGDGRVVPFSRIQKIQSLEGGILDRLLVKE 83

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAF 131
           G  +  G PL+  ++                LR     +D E      +    DV  +  
Sbjct: 84  GDLVEVGQPLVRLDETRFLTNFQESANQASVLRAAIARLDAEVLGKKSIEFPPDVDPEGP 143

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +R E       +   +       G  ++ R +                           
Sbjct: 144 LARSE------RELFKSRRDKLVEGTQAIQRQIH-------------------------- 171

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               Q  L +++ L  K AVSQ +            L+L ++I      L  +       
Sbjct: 172 --LAQSQLDLVRPLVAKRAVSQME-----------ALKLSQDIATLSGKLTELKST---- 214

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 Y ++   +  Q +   +     +   +    +  ILSP+ G +      +    
Sbjct: 215 ------YFQDAYTERAQRKADLSALEPIVQQRQDQLRRTEILSPVRGRVNTVLINTRGGV 268

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  +P+M+++P  +   + AK+ P+ +  +  G  A V+   Y        K  +E+I 
Sbjct: 269 IQPGEPIMEVIPVEERLLVEAKIKPRDVAFLVPGMPAKVKITAYDYTIYGDLKGTLEQIS 328

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHP 429
               ++D     + YY+V++K            + +  G  AEV   +   ++   ++ P
Sbjct: 329 ADTIEEDTPHGKESYYQVLIKTDGSQLKRGEEVLPIIPGMVAEVDILSGKRSVLNYLLRP 388

Query: 430 I 430
           +
Sbjct: 389 L 389


>gi|296102428|ref|YP_003612574.1| RtxD/HlyD/CyaD protein of type I secretion system [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295056887|gb|ADF61625.1| RtxD/HlyD/CyaD protein of type I secretion system [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 391

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 69/437 (15%), Positives = 140/437 (32%), Gaps = 57/437 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             LK         +       +   I W+ L  ++   + +G+++   +   I+S   GI
Sbjct: 9   SRLKEPRLPRSTWVAWSLFALLAAFIAWASLFQLDEVTTGNGKVIPSSHEQVIQSLEGGI 68

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V  G  + +G  L   +  +T   +   +  +          K+ ++        
Sbjct: 69  IHSLLVREGDIVERGQRLAQLDRTKTESSVLESESRLNAALATAARLKAEVN-------- 120

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                E    Q LD   +     + +F     S+ + L                     +
Sbjct: 121 ---DTELTFPQELDDDVELVKQETALFQSRRESLEKGL---------------------A 156

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LR      Q++L++ + L  + A S+ ++ + ER       EL   I E KN       
Sbjct: 157 GLRQGAELVQRELSLTRPLVTQGAASKVEVLRLERQ----KNELENKITEMKN------- 205

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                      Y      +L +       + S +   E +  + T  +P+ G +      
Sbjct: 206 ----------QYYVRAREELAKANAEIEAQRSVMKGREDSLTRLTFNAPVRGIVKDIDVT 255

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +  LM +VP      + AK++P+ +  +  G  A V+   Y           
Sbjct: 256 TVGGVIPPNGKLMSLVPLDDQMVVEAKISPRDVAFIHPGQKALVKITAYDYSIYGGLTGE 315

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLA 423
           +  I P   Q +       YY V ++      ++       +  G  A V     + ++ 
Sbjct: 316 VTMISPDTLQDEVKRDV-YYYRVYIRTDSNHLTNKQGKEFPVFPGMIATVDIKTGSKSIL 374

Query: 424 QEIIHPITDNWPKIFER 440
             ++ P+      + ER
Sbjct: 375 DYLLKPLNKAKEALRER 391


>gi|238797452|ref|ZP_04640951.1| type I secretion protein [Yersinia mollaretii ATCC 43969]
 gi|238718723|gb|EEQ10540.1| type I secretion protein [Yersinia mollaretii ATCC 43969]
          Length = 389

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 73/433 (16%), Positives = 159/433 (36%), Gaps = 57/433 (13%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M +   +  + +    +  +  L+++G+I +  W+    ++     +G++        I+
Sbjct: 1   MSNLSLQQERAHQEQRMSLIVWLTLVGMIVMFVWAYFAILDEVTVGTGKVTPSSRAQLIE 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GII +  V  G+ I +G  L   +              ++ LR   +  ++ L   
Sbjct: 61  SLDGGIINELLVHEGAIINKGQILARLDPTRFQSNYGEAAARVRTLRASSERLRAELTGA 120

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                +   A   +E +L+    +++ +  +  N  +S++ +S                 
Sbjct: 121 A----LAFGADTLKEPELVARETQFYLSRRQNLNETVSNLQQS----------------- 159

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                      L   Q++L M + L  K A SQ ++ + +R +     +LR  I E +N 
Sbjct: 160 -----------LKLVQQELRMTEPLVAKGAASQVEVIRLQRQIS----DLRGKIDEARN- 203

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                            Y      +  +N      ++  ++  +    + T++SP+ G +
Sbjct: 204 ----------------QYAVRAREEQVKNNADLDAQLQVVSGKQDQLTRTTLISPVRGIV 247

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              Q  +     Q    LM+IVP  +   I  ++ P+ I +++ G  ATV+   Y     
Sbjct: 248 KDIQVSTVGGVLQPGGKLMEIVPIEEQLLIETRINPRDIAYIRPGLAATVKITAYDSSIY 307

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTA 417
                ++E + P   Q +   + Q YY + ++         +  +  +  G  A V    
Sbjct: 308 GNLTGVVETVSPDTLQDE-IKRDQFYYRIYIRTDRAELINKAGKSFPILPGMVASVEIKT 366

Query: 418 KNTTLAQEIIHPI 430
              T+   +I P+
Sbjct: 367 GQKTVLDYLIKPL 379


>gi|260778640|ref|ZP_05887532.1| HlyD family secretion protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260604804|gb|EEX31099.1| HlyD family secretion protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 437

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 72/431 (16%), Positives = 170/431 (39%), Gaps = 16/431 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            +N   +L   T    + +I  +TWS++  ++    + G ++ E     ++S   G +K+
Sbjct: 18  SQNTARTLALATWSVALCVIAFVTWSVVTQVDEIAKAKGAVIPEGEKQVLQSAIGGKLKQ 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V+ G  + +G PL+ F+          ++ +++ L+    T  ++++ +N   D  E 
Sbjct: 78  ILVKEGQLVEKGQPLVEFDAT-------FQRTALEELKSQQVTLLASIERMNALLDDREP 130

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   E    + + +  +      N      Y+   +       I      +E       
Sbjct: 131 NFGEFEIDFPEIVSQQKAQ----LNAQKGLYYQKRIVLEKDSEQIAEQLRVVEKSLPSYD 186

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L++ +++L +++   +   +S+  + +  + +     ++ E   ++  +++  +    
Sbjct: 187 KELNATKQELNILEKGNKAGNISRLRVLEMRQKLASIEQKIEEARGKKSVLIKQADSNEQ 246

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +     A    ++S D  +     +   +++   +       ++SP+ G +    S  + 
Sbjct: 247 KIEQLLAEAKAKVSDDRSKAVSDLSALNARVRSSQAKLTNTMLVSPLQGLVQSLPSTQNG 306

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              Q    +++IVP       +A+++P+ I  V  G    ++   +   R    K  +E 
Sbjct: 307 GVIQPGGTVVEIVPVGGKADFKARLSPRDIGFVNVGQPTRIKIDAFDYSRFGALKGEVES 366

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQEII 427
           I P  SQ +     + YYEV++ +    F DN  +  +  G   EV  T    ++ Q + 
Sbjct: 367 ISPTTSQSER---GEIYYEVVVSVETPYFRDNPESFSILPGMTGEVDITTGEKSVFQYLW 423

Query: 428 HPITDNWPKIF 438
            PI  N    F
Sbjct: 424 KPIYTNISVAF 434


>gi|29421530|gb|AAO73505.1| RsaE [Caulobacter vibrioides]
          Length = 419

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 60/429 (13%), Positives = 158/429 (36%), Gaps = 14/429 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     +    N  +  +    +  +  +G++ W+   P++ +V ++G +  + N   I+
Sbjct: 1   MKPPKIQRPTDNFQSVARIGYGIISLTFVGVLGWAAFAPLDSAVIANGVVTTDAN-KTIQ 59

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSAL 117
               G++ K  V  G ++  G  L   +  +        +      + L   +  E+   
Sbjct: 60  HLEGGMLSKILVREGERVKAGQVLFQLDPTQVNAAAGTTRAQYVAFRALEARLVAERDQR 119

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             ++   ++L +  +         + +        F     ++   + +   +       
Sbjct: 120 PTISFPTELLTQRADP-------VVARALIDEQSRFIERRQTIQGQVDLFNAQRAQFKSE 172

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              +E ++  L+  L   Q++L  ++ ++EK  V +  +   ER     +  L +   ++
Sbjct: 173 IDGIERQAQGLKEQLGFLQEELGDIRKIYEKGLVPRPRILALERETGSLSGALGQLNADR 232

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              ++ + E   +       + +E+S  + + +   A+   +  +   ++++  I+SP+ 
Sbjct: 233 SKAIQGMGETQLKIRQIREQFFEEVSEAIAETRVQLAEVSEREVLAADSQKRVNIVSPVN 292

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G     + F+     + ++PL+ I P  +   I A+  P  + ++ +G    VR P +  
Sbjct: 293 GVAQALRFFTEGPVVRSAEPLVDIAPDERSLKIHAQFAPTDVDNIHEGMVTEVRLPSFHS 352

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFT 416
                    I  I     +  +      Y+  ++ +       N    +  G PA+V+  
Sbjct: 353 REVPILNGKIISISHD--RLTDPEGKVSYFLGVVHVDVKKLPPNLRSRVTAGMPAQVIVP 410

Query: 417 AKNTTLAQE 425
               T+ Q 
Sbjct: 411 TGERTVLQY 419


>gi|296389724|ref|ZP_06879199.1| putative secretion protein [Pseudomonas aeruginosa PAb1]
          Length = 395

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 67/421 (15%), Positives = 145/421 (34%), Gaps = 61/421 (14%)

Query: 16  SLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            + R  L +++G ++  I W+    ++      G ++    + +I+S   GI+ +  V+ 
Sbjct: 24  PVYRPLLWTLLGCVLLFIGWAAWAQLDEVTRGDGRVVPFSRIQKIQSLEGGILDRLLVKE 83

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAF 131
           G  +  G PL+  ++                LR     +D E      +    DV  +  
Sbjct: 84  GDLVEVGQPLVRLDETRFLTNFQESANQASVLRAAIARLDAEVLGRKSIEFPPDVDPEGP 143

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +R E       +   +       G  ++ R +                           
Sbjct: 144 LARSE------RELFKSRRDKLVEGTQAIQRQIH-------------------------- 171

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               Q  L +++ L  K AVSQ +            L+L ++I      L  +       
Sbjct: 172 --LAQSQLDLVRPLVAKRAVSQME-----------ALKLSQDIATLSGKLTELKST---- 214

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 Y ++   +  Q +   +     +   +    +  ILSP+ G +      +    
Sbjct: 215 ------YFQDAYTERAQRKADLSALEPIVQQRQDQLRRTEILSPVRGRVNTVLINTRGGV 268

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  +P+M+++P  +   + AK+ P+ +  +  G  A V+   Y        K  +E+I 
Sbjct: 269 IQPGEPIMEVIPVEERLLVEAKIKPRDVAFLVPGMPAKVKITAYDYTIYGDLKGTLEQIS 328

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHP 429
               +++     + YY+V++K            + +  G  AEV   +   ++   ++ P
Sbjct: 329 ADTIEEETPHGKESYYQVLIKTDGSQLKRGEEVLPIIPGMVAEVDILSGKRSVLNYLLRP 388

Query: 430 I 430
           +
Sbjct: 389 L 389


>gi|300717606|ref|YP_003742409.1| type I secretion membrane protein [Erwinia billingiae Eb661]
 gi|299063442|emb|CAX60562.1| Putative type I secretion membrane protein [Erwinia billingiae
           Eb661]
          Length = 389

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 72/436 (16%), Positives = 135/436 (30%), Gaps = 63/436 (14%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M   M     + +      +  L    ++    W+    ++     +G++        I+
Sbjct: 1   MSLIMVDRGMKQNERKTSAIIWLCTAALVIFFVWAHFAILDEVTVGTGKVTPLSRAQVIE 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSAL 117
           S   GI+ +  V  G  + +G  L   +               + LR     +  E +  
Sbjct: 61  SLDGGIVDQLNVHEGDIVEKGEVLAKLDPTRFQSNFGEAASKARTLRASAERLQAELTGA 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
               +   + E    +RE QL                                       
Sbjct: 121 PLAFSAETLKEPELVARETQLY-----------------------------------QSR 145

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R +L      L       Q +L M   L  K A  + ++ +  R V     +L+  I E 
Sbjct: 146 RRNLSETVKNLEDAKKLVQDELRMTAPLVAKGAAGEVEVIRLRRQVS----DLQGKIDEA 201

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           KN                 +Y      +  +N      ++  +T  E    + T+ SP+ 
Sbjct: 202 KN-----------------DYAVRAREEQVKNNADLDAQLQVVTGKEDQLTRATLYSPVR 244

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q  +     Q    LM+IVP      I  ++ P+ I +++ G  ATV+   Y  
Sbjct: 245 GIVKDIQVTTVGGVLQPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKVTAYDS 304

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVL 414
                    +E + P   Q +   + Q YY V ++      ++       +  G  A V 
Sbjct: 305 SIYGDLPGEVETVSPDTIQDEV-KRDQYYYRVYVRTQKAELTNKAGRKFPIVPGMVANVE 363

Query: 415 FTAKNTTLAQEIIHPI 430
                 ++   +I P+
Sbjct: 364 IKTGQKSVMDYLIKPL 379


>gi|83943845|ref|ZP_00956303.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Sulfitobacter sp. EE-36]
 gi|83955323|ref|ZP_00963978.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Sulfitobacter sp. NAS-14.1]
 gi|83840316|gb|EAP79490.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Sulfitobacter sp. NAS-14.1]
 gi|83845525|gb|EAP83404.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Sulfitobacter sp. EE-36]
          Length = 396

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 62/429 (14%), Positives = 153/429 (35%), Gaps = 62/429 (14%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
             +  L    ++  + W+    ++  V + G +++      I++   GI+ +  V  G  
Sbjct: 21  SMVIWLCGASVLVFLLWAAFAWVDEIVRAEGSMISSSRPQIIQNLEGGILAELAVGEGDH 80

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           + +G  L      +    +D  +  I      R  ++ E +                   
Sbjct: 81  VEKGDVLARLHGTQFQSAVDDLRDQISAFEIRRLRLEAELAG------------------ 122

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                    +Y       +      +  S +  L   +S +++R +   +       L+ 
Sbjct: 123 ---------QYDFDVPDAYATRTPDIVASERALLKARQSDFVSRSEGAGRV------LTE 167

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             K+  +++N+ +K  VS  ++ +  +    + ++L              +E+     LE
Sbjct: 168 ALKERELLENMLKKKIVSLIEVTRARKTHADARIKL--------------DEIVTGTELE 213

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A    ++ ++L       A     L        +  ++SP+ G +      +     + 
Sbjct: 214 RAQEYSDVLKEL-------ATLKQNLKASTDQLNRTVLVSPLRGIVNNLSVTTIGGVVRP 266

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + +++I+P  +  ++ A+V P+ I  V+ G  ATV+   Y        K  ++ I    
Sbjct: 267 GEEILQIIPLDEELFVEARVKPEDIAGVRPGQEATVKLSAYDYTIYGTLKGTVKLISADT 326

Query: 375 --SQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              ++        +Y+V L++     +     +++R G  A V     + T+ Q ++ P+
Sbjct: 327 FKDERSRAPDGDPHYKVTLQVDTEHLTPRQASLQIRPGMQASVELHTGSKTVLQYLLKPL 386

Query: 431 TDNWPKIFE 439
             +  + F 
Sbjct: 387 YKS-KEAFR 394


>gi|254477543|ref|ZP_05090929.1| type I secretion membrane fusion protein, HlyD [Ruegeria sp. R11]
 gi|214031786|gb|EEB72621.1| type I secretion membrane fusion protein, HlyD [Ruegeria sp. R11]
          Length = 389

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 70/421 (16%), Positives = 156/421 (37%), Gaps = 53/421 (12%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
               R+  L    ++  + W+    ++  V + GE+++      +++   GI+ +  V  
Sbjct: 13  RGASRIIYLVAGALVVFLLWASFAWVDEIVRADGEVVSSSRSQIVQNLEGGILAELHVHQ 72

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++  G  L   +D +     D  +  I  L       ++ L+     +DV        
Sbjct: 73  GDEVKAGQILARLQDTKFRAAADDLQDRIDALEIKQYRLEAELEG-AFDFDV-------- 123

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            ++L D     +++   + N                       + D  ++    R +L  
Sbjct: 124 PQELADRSPGIYTSERALLNAR---------------------QTDFTSRRESAREILDQ 162

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            + +   M+ L++K  V+  ++N+ ++ V                     NE+  ++ LE
Sbjct: 163 LKDEHANMQRLYKKEIVALIEVNRAQKAVSD--------------AQAKYNEIGTQSELE 208

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A        D  +  R       +L +     E+  I SP+AG +      +     + 
Sbjct: 209 LAE-------DYSKTLRELTSYRQELRLARDQLERTVITSPMAGIVNSLSVTTIGGVIRP 261

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + +++I+P  +  ++ A+V P+ I  V+ G  AT++   Y        +  ++ +    
Sbjct: 262 GEEILEIIPLGEEMFVEARVKPENIASVQPGQDATIKLSAYDYTIYGSLRGKVDFVSADT 321

Query: 375 SQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            + + N + + YY V +K+    F      IE+R G  A         T+ Q ++ P+  
Sbjct: 322 FEDERNPRAEPYYRVTVKVDRSQFTERQQEIEIRPGMRATAELQTGTKTILQYLLKPLYK 381

Query: 433 N 433
           +
Sbjct: 382 S 382


>gi|302384377|ref|YP_003820200.1| type I secretion membrane fusion protein, HlyD family
           [Brevundimonas subvibrioides ATCC 15264]
 gi|302195005|gb|ADL02577.1| type I secretion membrane fusion protein, HlyD family
           [Brevundimonas subvibrioides ATCC 15264]
          Length = 445

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 65/427 (15%), Positives = 147/427 (34%), Gaps = 13/427 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++    +  +  +  + W+ + P++    ++G++    N   ++    G++    V  G 
Sbjct: 22  MRAGMAVIGVFFVLFLGWAAIAPLDAGAYAAGQVAVSGNRQAVQHQQGGVVSALHVAEGD 81

Query: 77  QILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           ++ +G  L+     E       +  + VS+   R  +  E+  L  +    +     F  
Sbjct: 82  RVRRGQVLVELATGELQATERGVTGQVVSLLAQRARLIAERDGLASITTPAE-----FAG 136

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                L             F    +       +   R+  +      L+ +     A   
Sbjct: 137 YTGPDLALAQDAMRLQRLQFMARRNGRSTETGVLTQRIGQLNQQVEGLQRQIESNVAQRQ 196

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +++L  +++L  +    Q  +   ER       EL     +       + +   +   
Sbjct: 197 LIERELDGVRSLAARGFAPQTRVMALERTAVALDGELGSLRAQVAGTNEAVGQTRLQMLG 256

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                 ++++  L Q + +  +   +L  L     +  + +P  G +V   +F+      
Sbjct: 257 VSTTMEEDVADQLRQAEVSLNELRPRLAELRAQIARSRVRAPATGEVVGVTTFTVGGVIT 316

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q LM IVP +    I A + P  I +++ G +  V+FP   +         + ++ P 
Sbjct: 317 PGQTLMDIVPENASQVIIASINPSDIDNLRLGLSTEVKFPGLREQSTPLLHGTVTRLSPD 376

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRNGFPAEVLFTAKNTTLAQEIIHPI 430
               + + +T  YY   + I              +R G P EV+   +  T  Q +I P+
Sbjct: 377 SFTDEKSGRT--YYRAEVVIPPGELVKLGASAQSIRPGMPVEVVVLLRKRTALQYMIEPL 434

Query: 431 TDNWPKI 437
           T    + 
Sbjct: 435 TSGLWRS 441


>gi|114321315|ref|YP_742998.1| HlyD family type I secretion membrane fusion protein
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227709|gb|ABI57508.1| type I secretion membrane fusion protein, HlyD family
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 427

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 73/431 (16%), Positives = 140/431 (32%), Gaps = 66/431 (15%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             + R   L  + +   + W+    +    S    ++       I+S   GI+++  V  
Sbjct: 52  RRIGRFIGLVGLFVGAFVVWAYWAELAEVSSGQATVVPSRGTQVIQSLEGGILQELLVAE 111

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLEKAF 131
           G  +  G PL   +   T   +D      +     +  ++ E +    +    +      
Sbjct: 112 GEMVEPGQPLARLDPTRTQADMDEVIARYQGALARKARLEAELAGEGEIRFPEE------ 165

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                  LD   +  +    +F                        R  LE     +R  
Sbjct: 166 -------LDLASEVVAAERTLFEAR---------------------RAHLERTEQDIRTS 197

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L     + ++ + L    A S+ +L Q  R       EL +  +E               
Sbjct: 198 LQLVGNERSITEELVRAGAASEVELLQLRRSEADLRRELNQLRNE--------------- 242

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 +     +DL + +       S L   E TR+++T+ SP+ G +      +    
Sbjct: 243 ------FRVRARQDLAETRTEVEALRSSLRGHEDTRQRQTLRSPVRGRVQNLAVTTIGGV 296

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              +  LM+IVP      I A+++P+ I ++  G  A V+   Y        +  +  I 
Sbjct: 297 LAPNGELMEIVPQDGELRIEARISPRDIAYIHPGQRAQVKITAYDYAIYGGLEGEVVNIS 356

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           P   + + N + + YY+V +          +     +  G  AEV       T+ Q II 
Sbjct: 357 PDTERDEINPE-EVYYKVFIHTDSDELVVENGQRFPISPGMVAEVDIETGQRTVLQYIIK 415

Query: 429 PITDNWPKIFE 439
           P    + +  E
Sbjct: 416 P----FNRARE 422


>gi|254488557|ref|ZP_05101762.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. GAI101]
 gi|214045426|gb|EEB86064.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. GAI101]
          Length = 437

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 67/411 (16%), Positives = 146/411 (35%), Gaps = 14/411 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W I   I  ++ +SG +  E N   ++ P  G++ +  V +G  +  G  LL  +     
Sbjct: 34  WGIQSRIAGAIIASGSVQVESNRQVVQHPKGGVVGEILVHDGDMVSAGDVLLRLDASLER 93

Query: 94  DLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTC 149
             +   + +   I   +  ++ E+  LD L     + E  A ++  ++L+D   +     
Sbjct: 94  AELAIIEGQLYEILARKARLEAERDGLDDLVISDHLREALADDATVQRLIDGQQRLFEAR 153

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +         +   +     +++        LE + +L+         +L   + LFEK 
Sbjct: 154 ATTLQQKSEQISEQINQTENQIKGATAQLAALETQRTLIEV-------ELKDSETLFEKG 206

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
                 ++   R   +   E+     +   M   I  L  E     +   ++    L   
Sbjct: 207 LSPAARVSSLRREQARLNGEIGSLDAKVAEMRDRIASLNIETISLTSRIREDAITTLRDL 266

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q +  +   +    ++T  +  I SP++G I  +  F+  +    ++P+M ++P  +   
Sbjct: 267 QFSETELFQRRLSSKETLSRMEIRSPVSGIIYGSTIFALQSVVSAAEPVMFVIPQDRSLV 326

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I A +    +  V  G  A +RF  +           + K+   + + +  +    +Y V
Sbjct: 327 ISASIDAIHVDQVHVGQVADLRFAAFDQRMTPSILGRVTKLSADVFRDE--VTGVSFYRV 384

Query: 390 ILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            L              L  G P E      + +    +  P+T  + + F 
Sbjct: 385 ELIPEAGELEKLEGQILLPGMPVEAFIKTGDRSPLSYLAKPLTVYFSRAFR 435


>gi|152991936|ref|YP_001357657.1| type I secretion membrane fusion protein [Sulfurovum sp. NBC37-1]
 gi|151423797|dbj|BAF71300.1| type I secretion membrane fusion protein [Sulfurovum sp. NBC37-1]
          Length = 446

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 90/443 (20%), Positives = 174/443 (39%), Gaps = 18/443 (4%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           HH +   L++ H ++ K   +  ++       WS+   I  +++++G+++ +     I  
Sbjct: 13  HHEL---LEKTHRSARKAGIITILLIFGLFGIWSVFADIATTITANGKVITDTYNKIITH 69

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALD 118
           P  GI+KK  V  G  + +G  LL  +  +    +D             C +  E S L 
Sbjct: 70  PKGGIVKKIFVHEGDVVKKGDKLLEIDSTDYLSKLDAAISQYDAALFTICRLKAEASFLK 129

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            LN   D LEK   + EE       +  S    +F+  + S+   + +  ++ + +    
Sbjct: 130 ELN--CDALEKKLLNPEE-----YQELKSDAISLFHSEMESLKSKITLLKSKNKILTEQN 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           + L+      + LLSS++ +L   K L ++NAV +    + ER + +   ++       +
Sbjct: 183 VGLKKHIESNKKLLSSYELELKKWKKLLKQNAVDEQKSIETERKIEQIHQQIESLESTIR 242

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             +  I+    + +LE   +      +L + +       +++   E   +   I SP  G
Sbjct: 243 ENIASIDANKKQMDLEKNTFKNNALSNLGKLKLENKLTKTQIMSYENGIDNSIIKSPGEG 302

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   +  +S       +P+M IVP  +   I A V P  I+ +  G    + FP + D 
Sbjct: 303 RVTDMKIHASGEVVAPQKPIMSIVPLKQKLKIEAFVLPTDIEKIHVGQQTEISFPSFVDP 362

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLF 415
                   I  I             + +Y +++K T   + A   NN  +  G P  V  
Sbjct: 363 SAIPIAGKISYISADSI--VPEGMKEPFYRILVKFTPEGEKAIKKNNFLILPGMPTAVFV 420

Query: 416 TAKNTTLAQEIIHPITDNWPKIF 438
                TL + I+ P+      IF
Sbjct: 421 KTGKMTLLEYIMQPLIQLSKGIF 443


>gi|312883506|ref|ZP_07743231.1| HlyD family type I secretion membrane fusion protein [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368729|gb|EFP96256.1| HlyD family type I secretion membrane fusion protein [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 440

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 77/419 (18%), Positives = 160/419 (38%), Gaps = 12/419 (2%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             L  I G+ G + WS+ L I+ +V +SG+I  E     ++ P  GI+K   +  G+ + 
Sbjct: 23  GMLALIFGLGGFVLWSVSLKIDGAVVASGQISVEAKQQAVQHPDGGIVKHIYIREGAFVE 82

Query: 80  QGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            G PLL  +         ++  K+V  +     + +E S  + LN    ++E        
Sbjct: 83  IGEPLLLLDGASLHTQQTVLKRKRVEARARIERLFSEISGSNELNYSSKLIEMGTG---- 138

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             ++   +  +    +FN   + + ++      R +        L+ + +  +  L   Q
Sbjct: 139 --IEGFEEILNNEKMLFNARKTIIDQTKAQSQIRQKRTENVISGLQRQLAATKKQLKLTQ 196

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           KDL   + L  +   S+  L    R   K   EL +           I +   E   +  
Sbjct: 197 KDLDAQERLQAQEFASKTQLRILHREAAKYESELGQLEASIAESRNTIADHEIEWLRQKT 256

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            + ++   +L+  +   A+ +  + +     ++  + +P++G ++   + +     Q   
Sbjct: 257 KFQEDAQSELQDLRVKQAELIENIDLNSIKLKRLVLRAPMSGRVLGLSANTIGGVIQAGT 316

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +  IVP S    +  ++ P QI  V  G    +RFP +  +   +    I+ I   +  
Sbjct: 317 EIANIVPSSMPLVVNVRIDPLQIDRVSIGQEVRIRFPSFNAVTTPEVYGKIKNISADVIS 376

Query: 377 QDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
             N      ++   + + + A  D   +EL  G   +        T A  ++ PI + W
Sbjct: 377 DPN--SGTSFFTAEITLDEQAKQDLAELELVPGMLVDAFIRTDERTPASFLLKPIFEYW 433


>gi|283786243|ref|YP_003366108.1| membrane fusion protein of T1SS [Citrobacter rodentium ICC168]
 gi|282949697|emb|CBG89316.1| putative membrane fusion protein of T1SS [Citrobacter rodentium
           ICC168]
          Length = 387

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 65/437 (14%), Positives = 143/437 (32%), Gaps = 61/437 (13%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
               + +    +   R+  L+ I  + L  W+    ++   + +G+++       ++S  
Sbjct: 2   DALDDSREREFSGASRIIWLTGILCLLLAVWAWFGVLDEVSTGTGKVIPSSREQVLQSLD 61

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI+ +  V  G Q+  G  L   +   +   +     S    R  + + +     +++K
Sbjct: 62  GGILAELMVHEGDQVQAGQVLARLDPTRSESNVGE---SAARYRASLASSQRLTAEVSDK 118

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             V     +   E +      Y+S                              R  L +
Sbjct: 119 PLVFSDELKDWPELIASETRLYNS-----------------------------RRAQLAD 149

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + L+  L+   K+L + + L +  A S  ++ + +R      L+L +   +       
Sbjct: 150 AQTELKEALALVNKELAITERLAKSGAASHVEVLRLQRQKSDIGLKLTDLRSQ------- 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                         Y  +    L +     A   + +     +  + T+ SP+ G +   
Sbjct: 203 --------------YYVQAREALSKANAEVAMLTAIIKGRSDSVTRLTVRSPVRGIVKNI 248

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           Q  +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y        
Sbjct: 249 QVTTIGGVIPPNGEMMEIVPVDDHLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGL 308

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNT 420
           + ++E I P   Q +   +   YY V ++       +       +  G  A V       
Sbjct: 309 EGVVETISPDTIQDEVKPEI-FYYRVFIRTKQDFLQNKLGRQFSIVPGMIATVDIKTGEK 367

Query: 421 TLAQEIIHPITDNWPKI 437
           T+   +I P    + + 
Sbjct: 368 TIVDYLIKP----FNRA 380


>gi|149189979|ref|ZP_01868257.1| HlyD family secretion protein [Vibrio shilonii AK1]
 gi|148836145|gb|EDL53104.1| HlyD family secretion protein [Vibrio shilonii AK1]
          Length = 431

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 76/439 (17%), Positives = 171/439 (38%), Gaps = 16/439 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
             +      +     L  +T    + +I   TWS +  ++    + G ++ E     I+S
Sbjct: 4   SQYAEAIESQQTKKLLSVITYSIALCVIAFGTWSAVTQVDEIAKAKGTVVPEGERQIIQS 63

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G +K   V  G  + +G  L+ F+          +  +++ L+    +    ++ L+
Sbjct: 64  DIGGKLKTISVAEGDMVEEGQVLVEFDAT-------FQTTALEELKAQQASLNLTIERLS 116

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           +  D  E  F+  + Q  + + +  +  S      I+  Y+   +       I       
Sbjct: 117 SLIDEREPNFDLYQSQYPELVAQQRAQRS----AQIALYYQKRIVLEKEAEQIAEQLRST 172

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E         LS+ +++L++++   +   +S+  + + ++ V     ++ E   ++  ++
Sbjct: 173 EKAIPAYERQLSASKQELSILQKGQKSGNISRLRVLEMQQKVASIEQQIEEARGKKALLI 232

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           +  +   ++ +   A    E++    +     +   +++   E       + SP+ G + 
Sbjct: 233 KQADSNDEKISQLLAEAKVEVADQRSKAASELSALEARVRSGEAKLTNTVLTSPLQGLVQ 292

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              S       Q    +++IVP       +A+++P+ I  V +G +A V+   Y   R  
Sbjct: 293 SIPSTKVGAVIQPGGTVVEIVPIGGTADFKAQLSPRDIGFVNEGQSARVKIDAYDYSRFG 352

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKN 419
             K I+E I P  S+ +   +   +YEV +++    F D  +   L  G   EV  T   
Sbjct: 353 ALKGIVESISPTTSKDE---KGNIFYEVTIEVEKPYFRDDPDRFALLPGMTGEVDITTGE 409

Query: 420 TTLAQEIIHPITDNWPKIF 438
            T+ Q +  PI  N  + F
Sbjct: 410 KTVFQYLWKPIFTNISRAF 428


>gi|331656296|ref|ZP_08357258.1| membrane spanning export protein [Escherichia coli TA206]
 gi|331054544|gb|EGI26553.1| membrane spanning export protein [Escherichia coli TA206]
          Length = 393

 Score =  279 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 70/437 (16%), Positives = 157/437 (35%), Gaps = 64/437 (14%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            +   L++    +L  M +  ++ ++  + W+   P++      G I+       I++  
Sbjct: 3   DVQAALQQEKHHALFLMVIFLLVLVVTFVIWAWNSPLDEVTRGQGSIIPGSREQVIQTLD 62

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI+K  +V  G  + +G  LLT +D  ++ ++   +  + NL       ++        
Sbjct: 63  PGILKTLEVREGDIVEKGQVLLTLDDTRSSAMLRESEARVNNLEAVRARLRAEA------ 116

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                   + S  F   + +  R  +  + R+R     + +L  
Sbjct: 117 -----------------------YSESLTFPDDVPADLRERESTVYRLR-----KTELAQ 148

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + L+   +   K++ M + +  + A+S+ +L + +R                      
Sbjct: 149 SIAGLKQSKALLDKEIAMTRPIVREGAMSEVELLRMQR---------------------Q 187

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             EL  + + +   YL E   +L + +   A     +       E+  I +P+ G +   
Sbjct: 188 SAELQLQMDEKQNKYLTEAGAELVKTEAELAQAKENMAGRADPVERSRIRAPLRGIVKNI 247

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +        Q +M+I+P      I A + P+ + +V+ G  A V+   Y        
Sbjct: 248 RVNTLGGVVSAGQDIMEIIPLEDQLLIEAYINPRDVAYVRTGMPALVKLTAYDYAIYGGL 307

Query: 364 KAIIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAEVL 414
             ++  + P   +             + YY V++  ++   +D N   + +  G  A V 
Sbjct: 308 DGVVTLVSPDTLRDQKRPGDLKLDPNEAYYRVLVTTSNNYLTDRNGKILPVIPGMIASVD 367

Query: 415 FTAKNTTLAQEIIHPIT 431
                 ++ Q +I PIT
Sbjct: 368 IKTGQKSVFQYLIKPIT 384


>gi|227357897|ref|ZP_03842244.1| type I secretion membrane fusion protein [Proteus mirabilis ATCC
           29906]
 gi|227161902|gb|EEI46924.1| type I secretion membrane fusion protein [Proteus mirabilis ATCC
           29906]
          Length = 419

 Score =  279 bits (713), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 77/433 (17%), Positives = 158/433 (36%), Gaps = 71/433 (16%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
             H  S   +T+L I  +I  + W+    +E      G I+       I++  +GI+K  
Sbjct: 37  EKHHKSFMMITILLIFMVI-FVIWAWNSNLEEVTRGQGSIIPSSREQIIQTLDAGILKSM 95

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVL 127
           QV+ G  + +G  LLT +D  T+ ++   +  + NL   R  +  E  + +         
Sbjct: 96  QVKEGDIVEKGQVLLTLDDTRTSAILRESEAKVANLEAIRARLKAEAYSTEL-------- 147

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                                    F  G+S+   + +  + ++R     +  L++    
Sbjct: 148 ------------------------SFPEGLSTELVTRETTVYKIR-----KDALKSGIDN 178

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L+   +   +++++ K +  + A+S  +L + ER      L++ E               
Sbjct: 179 LQQSKALLDREISITKPIVAQGAMSAVELLRMERQSADIQLQIDE--------------- 223

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                 +   YL E   +L + +   A     +       E+  I +P+ G +   +  +
Sbjct: 224 ------KKNKYLTEAGAELVKTEAELAQARENMAGRADPVERALIRAPLRGIVKNIRINT 277

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                   Q +M+IVP      + A ++P+ + +V+ G  A V+   Y        + ++
Sbjct: 278 VGGVISAGQDIMEIVPLEDQLLVEAYISPRDVAYVRAGMPALVKLTAYDYAIYGGLEGVV 337

Query: 368 EKIDPIISQQDNNL------QTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAK 418
             + P               Q + +Y V++       +D N   + +  G  A V     
Sbjct: 338 TLVSPDTLHDQKRPSDLKLNQDEAFYRVLVTTQSSHLTDKNGKELPVIPGMIASVDIKTG 397

Query: 419 NTTLAQEIIHPIT 431
             T+ Q +I PIT
Sbjct: 398 EKTVFQYLIKPIT 410


>gi|126737428|ref|ZP_01753163.1| putative type I secretion protein [Roseobacter sp. SK209-2-6]
 gi|126722013|gb|EBA18716.1| putative type I secretion protein [Roseobacter sp. SK209-2-6]
          Length = 391

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 70/427 (16%), Positives = 155/427 (36%), Gaps = 54/427 (12%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
               R+  L    ++  + W+    ++  V   GE+++      +++   GI+ +  V  
Sbjct: 15  RGASRIIYLVGAALLIFLGWAAFASVDEIVRGEGEVVSSSRAQIVQNLEGGILAELYVRQ 74

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++  G  L   +D +     D  +  I  L       ++ +D                
Sbjct: 75  GDEVEAGQVLAKLQDTKFRTAADELQDQIDALEIKQFRLEAEMD---------------- 118

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                   G Y    S       S +  S +  L+  +S + +R D        R +L  
Sbjct: 119 --------GAYKFEVSPELAARSSEILASERALLSARQSDFTSRRDSA------RKILDQ 164

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
              +L  M++L+++N V+  ++N+ ++                       NE+  +  LE
Sbjct: 165 LNDELANMQSLYKQNIVALIEVNRAQKAATD--------------AQAKYNEIGTQTELE 210

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A        +  +  R  A       +      +  I SP++G +      +     + 
Sbjct: 211 LAE-------EYSETLRELASLRQDQHLALDQLHRTVITSPMSGIVNSLAVTTIGGVIRP 263

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + + +I+P  +  ++ A+V PK I  V++G  AT++   Y           ++ +    
Sbjct: 264 GEEIFEIIPMGEELFVEARVNPKDIASVQRGQDATIKLSAYDYTIYGSLMGKVDFVSADT 323

Query: 375 SQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            + + N + + YY+V +++   +      NIE+R G  A       + T+   ++ P+  
Sbjct: 324 FEDERNPRAEPYYKVTVRVDRGSLTERQQNIEVRPGMRATAELQTGSKTVLNYLLKPLYK 383

Query: 433 NWPKIFE 439
           +  + F 
Sbjct: 384 S-REAFR 389


>gi|218676288|ref|YP_002395107.1| ABC transporter: Membrane fusion protein [Vibrio splendidus LGP32]
 gi|218324556|emb|CAV26061.1| ABC transporter: Membrane fusion protein [Vibrio splendidus LGP32]
          Length = 437

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 76/434 (17%), Positives = 166/434 (38%), Gaps = 22/434 (5%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            +N   SL   T    + +I   TWS++  ++    + G ++ E     ++S   G +K+
Sbjct: 18  SQNTARSLALATWSVALCVIAFATWSVVTQVDEIAKAKGAVIPEGEKQVLQSAIGGKLKQ 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V+ G  + +G PL+ F+       ++  K     L   ++   + L            
Sbjct: 78  ILVKEGQLVEKGQPLVEFDATFQRTALEELKSQQVTLLASVERMNALL------------ 125

Query: 130 AFESREEQLLDFLGKYHSTCSKV---FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             E RE  L +F   Y    S+     N   +  ++   +       I      +E    
Sbjct: 126 --EQREPNLAEFEVDYPEIVSQQKAQLNAQKALYFQKRVVLEKESEQIAEQLRSVEKALP 183

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L++ +++L +++  ++   +S+  + +  + +     ++ E   ++  ++R  + 
Sbjct: 184 SYEKELNATKQELNILEKGYKAGNISRLRVLEMRQKLASIEQKIEEARGKKSVLIRQADS 243

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +     A    ++S D  +     +   +++   +       ++SP+ G +    S 
Sbjct: 244 NDQKIIQLLAEAKAKVSDDRSKAVSDLSALNARVRSSQAKLTNTMLVSPLQGLVQSLPST 303

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
            +    Q    +++IVP       +A+++P+ I  V  G    ++   +   R    K  
Sbjct: 304 QNGGVIQPGGTVVEIVPVGGKADFKARLSPRDIGFVSVGQPTRIKIDAFDYSRFGALKGA 363

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQ 424
           +E I P  SQ +     + YYEV++ +    F DN  +  +  G   EV  T    ++ Q
Sbjct: 364 VESISPTTSQSER---GEIYYEVVVSVDTPYFRDNPESFSILPGMTGEVDITTGEKSVFQ 420

Query: 425 EIIHPITDNWPKIF 438
            +  PI  N    F
Sbjct: 421 YLWKPIYTNVSVAF 434


>gi|4689001|emb|CAB41456.1| membrane fusion protein [Sinorhizobium meliloti]
          Length = 473

 Score =  278 bits (712), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 67/443 (15%), Positives = 157/443 (35%), Gaps = 27/443 (6%)

Query: 9   LKRNHPASLKRMTLL----SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           L+    + ++R+ +      ++   G   W+    +  +  +SG I+ +     +     
Sbjct: 44  LENETRSPIRRLVIAGLTTILVAFGGFFGWAFSTELSSASVTSGTIIVDSKRKTVSHFEG 103

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLN 121
           G++ +  V+ G  +  G PL+  ED      +   + ++V +      + +E + L  ++
Sbjct: 104 GVLSRILVQEGDHVAPGQPLMQLEDTRARSDLQALESRRVGLIAKLARLRSELAGLQAVD 163

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              D++     +             +  +  F     +    + ++   +         L
Sbjct: 164 FPDDLVAAGEAA---------ADAVTAETAFFEKRNEAKEGRIAIQRKTIEEYSEKAKSL 214

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
             +       +    +  T +  L EK    ++ L +    +     EL     E     
Sbjct: 215 TAQLQATDRQIELMNEQRTAIATLVEKAFAQRSKLIE----IDARLSELAATRGEIAGDR 270

Query: 242 RHINELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +    A L      +++  EI+ ++   +   A+   ++   +    +  I +P A
Sbjct: 271 AQAEKAMAGAELTLTGIESDFQSEIAGEITTARLELAEVEERIISAKDVLRRLEIRAPQA 330

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q  +  +     QPL+ IVP  +   +   V+ + I  +  G +  +R   Y  
Sbjct: 331 GIVANIQLRTPGSAVTPGQPLLDIVPEDEPLLVEMHVSTRDIDSITIGSSTQIRLTAYNQ 390

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFT 416
                    +  I    S  + +     Y+    +I   + + N +I L  G PAEVL  
Sbjct: 391 RSHLPMDGKVTYIAADQSMDEKSNVA--YFVARAEIAPESLAANPDIRLYPGMPAEVLIV 448

Query: 417 AKNTTLAQEIIHPITDNWPKIFE 439
            K  +    ++ P++D++ + F 
Sbjct: 449 HKARSAIDYLVSPVSDSFNRAFR 471


>gi|319785025|ref|YP_004144501.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170913|gb|ADV14451.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 458

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 141/390 (36%), Gaps = 13/390 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCH 109
           E NV +++    G +     ++G  +  G  L+  +D  T   + +    +         
Sbjct: 76  ESNVKKVQHQTGGTVGGIFAQDGDHVRAGDVLVRLDDTLTRANLQIISEDLDRATVRLAR 135

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           ++ E++ L  +     +  +  +     L++       T S       + +        +
Sbjct: 136 LEAERTGLAEMQLPVGLKARMNQPELAALVNGERALFETRSSALAGQKAQLR-------S 188

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           + + +      L+ + S +   ++   KD   + +L+ K  VS+  ++  +    ++  E
Sbjct: 189 QSQQLERQIDGLKAQQSAVDESVALLSKDFADVDSLYAKKLVSKERVSNIKLDATRARGE 248

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                         I+E   +          +++ +L + +    +   +  + +    +
Sbjct: 249 SGRLAAAVAEAQARISETGLQMLQLDDQRRTDVTTELRETEAKQTELNERRIVAQDELTK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            TI +P +GTI  +   +        + LM IVP +    + A + P ++  V+ G   +
Sbjct: 309 TTIRAPQSGTIQESAVHTVGGVIAPGEMLMTIVPDTDDLVVDALIPPSRVDDVRPGQPVS 368

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE-LRNG 408
           +RFP +        +  ++ I   + +     +   Y+   +K+   +      + LR G
Sbjct: 369 IRFPAFDVGTTPVCQGSVKHISADLIKD--PQRQLSYFSARIKVESKSSCLTEAKVLRPG 426

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            PAEV        +   ++ P  D   K F
Sbjct: 427 MPAEVHIRTDERNVWSYLLKPFADQMSKAF 456


>gi|295095896|emb|CBK84986.1| type I secretion membrane fusion protein, HlyD family [Enterobacter
           cloacae subsp. cloacae NCTC 9394]
          Length = 391

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 72/447 (16%), Positives = 142/447 (31%), Gaps = 63/447 (14%)

Query: 1   MHHFMWKNLKRNHPA--SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE 58
           M+ F   N +   P       +       ++  ITW+ L  ++   + SG+++   +   
Sbjct: 1   MNDFSRFNSRLKEPRLPRSSLVAWSLFALLVFFITWASLFQLDEVTTGSGKVIPSSHEQV 60

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I+S   GII    V  G  + +G  L   +  +T   +   +  +           + ++
Sbjct: 61  IQSLEGGIIHSLMVREGDIVERGQQLAQLDRTKTESSVLESESRLNAAMATAARLNAEVN 120

Query: 119 --FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              L    ++ +     ++E  L                                     
Sbjct: 121 DTGLTFPAELDDDVELVKQETAL----------------------------------YQS 146

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            R  LE   + LR      Q++L + + L  + A S+ ++ + ER       EL   I E
Sbjct: 147 RRESLEKGLAGLRQGADLVQRELALTRPLVTQGAASKVEVLRLERQ----KNELESKITE 202

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            KN                  Y      +L +       + S +   E +  + T  +P+
Sbjct: 203 MKN-----------------QYYVRAREELAKANAEMEAQRSVMKGREDSLTRLTFNAPV 245

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +      +       +  LM +VP      I AK++P+ +  +  G  A V+   Y 
Sbjct: 246 RGIVKDIDVTTVGGVIPPNGKLMSLVPLDDQMVIEAKISPRDVAFIHPGQKALVKVTAYD 305

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEV 413
                  +  +  I P   Q +       YY V ++               +  G  A V
Sbjct: 306 YSIYGGLEGEVTMISPDTLQDEVKRDV-YYYRVYIRTDSNHLTNRQGKEFPVFPGMIATV 364

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIFER 440
                + ++   ++ P+      + ER
Sbjct: 365 DIKTGSKSVIDYLLKPLNKAKEALRER 391


>gi|29421540|gb|AAO73513.1| RsaE [Caulobacter vibrioides]
          Length = 419

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 58/429 (13%), Positives = 158/429 (36%), Gaps = 14/429 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     +    N     +    +  +  +G++ W+   P++ +V ++G +  + N   I+
Sbjct: 1   MKPPKIQRPTDNFKTVARIGYAIIALTFVGVLGWAAFAPLDSAVIANGVVTTDAN-KTIQ 59

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSAL 117
               G++ K  V  G ++  G  L   +  +      + +      + L   +  E+   
Sbjct: 60  HLEGGMLSKILVREGERVKAGQCLFQLDPTQVNAAAGITRAQYVAFRALEARLVAERDQR 119

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             ++   ++L +  +         + +  +     F     ++   + +   +    +  
Sbjct: 120 PTISFPTELLTQRADP-------VVARALADEQSQFIERRQTIQGQVDLFNAQRIQFFSE 172

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              +E ++  L+  L   Q++L  ++ +++K  V +  L   ER     +  + +   ++
Sbjct: 173 IDGIERQAQGLKEQLGFIQEELIDLRKIYDKGLVPRPRLLALEREQGSLSGAIGQLNADR 232

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              ++ + E   +       + +E+S  + + +   A+   +  +    +++  I+SP+ 
Sbjct: 233 SKAIQGMGETQLKIRQIREQFFEEVSEAIAETRVQLAEVSEREVVAADAQKRVNIVSPVN 292

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G     + F+     + ++ L+ I P  +   I A+  P  + ++ +G    VR P +  
Sbjct: 293 GVAQALRFFTDGAVVRSAEALVDIAPDERSFEIHAQFAPTDVDNIHEGMVTEVRLPSFHS 352

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFT 416
                    I  I     +  +      Y+  ++ +       N    +  G PA+V+  
Sbjct: 353 REVPILNGKIISISHD--RLTDPEGKVPYFLGVVTVDIKQLPPNLRSRVTAGMPAQVIVP 410

Query: 417 AKNTTLAQE 425
               T+ Q 
Sbjct: 411 TGERTVLQY 419


>gi|283788342|ref|YP_003368207.1| membrane fusion protein of T1SS [Citrobacter rodentium ICC168]
 gi|282951796|emb|CBG91506.1| putative membrane fusion protein of T1SS [Citrobacter rodentium
           ICC168]
          Length = 391

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 68/441 (15%), Positives = 134/441 (30%), Gaps = 57/441 (12%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +     L          +       +   + W+    ++   + SG+++   +  EI+S 
Sbjct: 5   NRFNSRLSEPKLPRSSLVAWFLFALLAAFVGWASYFHLDEVTTGSGKVVPSSHEQEIQSL 64

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GII K  V  G  + +G  L   +  +T   +   +  +           + ++    
Sbjct: 65  EGGIIYKLHVREGDIVEKGQVLAQLDRTKTESGVQESESKLHAALATAARLTAEVN---- 120

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                    E      L+      S    +F                        R  LE
Sbjct: 121 -------GGEPVFPSELNNETALVSQERALFQSR---------------------RESLE 152

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              + LR  ++  + +L M + L ++ A SQ ++ +  R                     
Sbjct: 153 KGVAGLRQGIALIEGELAMTQPLIKQGAASQVEVLRLRR--------------------- 191

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
             NE+ ++       Y      +L +       E S +   E +  + T  +P+ G +  
Sbjct: 192 QKNEMENKIAELQTQYYVRAREELAKANAEIETERSVMRGREDSLTRLTFTAPVRGIVKD 251

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +          LM +VP      I  K+ P+ +  +  G  A V+   Y       
Sbjct: 252 IDVTTVGGVIAPGGKLMSLVPLDDQILIETKILPRDVAFIHPGQEAMVKITAYDYSIYGG 311

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKN 419
              ++  I P   Q +       YY V ++       +       +  G  A V     N
Sbjct: 312 INGVVTLISPDTIQDEVKRDL-YYYRVYIRTDSNQLVNKQKKAFPVFPGMIATVDIKTGN 370

Query: 420 TTLAQEIIHPITDNWPKIFER 440
            T+ Q ++ P+      + ER
Sbjct: 371 KTVLQYLLKPLNKAKEAMRER 391


>gi|148974836|ref|ZP_01811816.1| HlyD family secretion protein [Vibrionales bacterium SWAT-3]
 gi|145965345|gb|EDK30594.1| HlyD family secretion protein [Vibrionales bacterium SWAT-3]
          Length = 437

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 71/431 (16%), Positives = 170/431 (39%), Gaps = 16/431 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            +N   +L   T    + +I  +TWS++  ++    + G ++ E     ++S   G +K+
Sbjct: 18  SQNTARTLALATWSVALCVIAFVTWSVVTQVDEIAKAKGAVIPEGEKQVLQSAIGGKLKQ 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V+ G  + +G PL+ F+          ++ +++ L+    T  ++++ +N   D  E 
Sbjct: 78  ILVKEGQLVEKGQPLVEFDAT-------FQRTALEELKSQQVTLLASIERMNALLDNREP 130

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   E    + + +  +      N      Y+   +       I      +E       
Sbjct: 131 NFGEFEIDFPEIVSQQKAQ----LNAQKGLYYQKRIVLEKDSEQIAEQLRVVEKSLPSYD 186

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             LS+ +++  +++  ++   +S+  + +  + +     ++ E   ++  +++  +    
Sbjct: 187 KELSATKQEQNILEKGYKAGNISRLRVLEMRQKLASIEQKIEEARGKKSVLIKQADSNEQ 246

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +     A    ++S D  +     +   +++   +       ++SP+ G +    S  + 
Sbjct: 247 KIEQLLAEAKAKVSDDRSKAVSDLSALNARVRSSQAKLTNTMLVSPLQGLVQSLPSTQNG 306

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              Q    +++IVP       +A+++P+ I  V  G    ++   +   R    K  +E 
Sbjct: 307 GVIQPGGTVVEIVPVGGKADFKARLSPRDIGFVNVGQPTRIKIDAFDYSRFGALKGEVES 366

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQEII 427
           I P  SQ +     + YYEV++ +    F DN  +  +  G   E+  T    ++ Q + 
Sbjct: 367 ISPTTSQSER---GEIYYEVVVSVETPYFRDNPESFSILPGMTGEIDITTGEKSVFQYLW 423

Query: 428 HPITDNWPKIF 438
            PI  N    F
Sbjct: 424 KPIYTNISVAF 434


>gi|126732082|ref|ZP_01747884.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Sagittula stellata E-37]
 gi|126707371|gb|EBA06435.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Sagittula stellata E-37]
          Length = 393

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 66/421 (15%), Positives = 149/421 (35%), Gaps = 59/421 (14%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
                L  I +   I W+ +  ++  V + GEI++      I++   GI+ +  V+ G +
Sbjct: 20  SMTIWLCAITVWVFIVWASMAWLDEIVRAEGEIISSSRPQIIQNLEGGILSELLVKEGDE 79

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +L+G  L      +    +D  +  I  L   R  ++ E S    +              
Sbjct: 80  VLRGDVLARLHGTQFRSSVDDLRDQITALEIRRLRLEAELSGNSVV-------------- 125

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                           +V    + ++  S +  L   +S Y++R     K       L  
Sbjct: 126 -------------EVPEVLRERLPAMVASEQALLAARQSDYISRRQGAQKV------LDQ 166

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++  +M+NL +K  V+  ++ +  +    +     E +   +                
Sbjct: 167 AAEEKALMENLLDKKVVALIEVTRARKAYADAKNAYDEIVTRTELARAE----------- 215

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                     +  +  +  A     L        +  ++SP+ G +      +     + 
Sbjct: 216 ----------EFSETLKELATLKQNLKASLDQLNRTVLVSPLHGVVNKLSVTTIGGVVRP 265

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + +M+I+P  +  ++ AKV P+ I  ++ G   T++   Y        K  ++ I    
Sbjct: 266 GEEIMQIIPLDEELFVEAKVKPEDIAGIRPGQEVTIKLSAYDYTIYGALKGRVDVISADT 325

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            + +   +   +Y+V  ++   A +D    +E+R G  A+V       T+ Q ++ P+  
Sbjct: 326 FKDERRPELPPHYKVTARVDRDAMTDRQAAMEVRPGMQAQVELHTGEKTVLQYLLKPLYK 385

Query: 433 N 433
           +
Sbjct: 386 S 386


>gi|254197724|ref|ZP_04904146.1| HlyD family secretion protein [Burkholderia pseudomallei S13]
 gi|169654465|gb|EDS87158.1| HlyD family secretion protein [Burkholderia pseudomallei S13]
          Length = 471

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 67/428 (15%), Positives = 150/428 (35%), Gaps = 16/428 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
               +   +  + +  +I L+ W+    I+I  +  G+++    V ++ +   GI+++  
Sbjct: 54  PARRAAALIPTVMLALLIVLVLWATFFKIDIIAAGQGKVIPSTTVQQLSTLEGGIVRELL 113

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G  + +G PL+  + +     +  +  + + L   I   ++  D             
Sbjct: 114 VREGQIVKKGQPLVRLDPVVAQGAVTEQAATREGLMASIARLQAEADGKATPLYP----- 168

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              + +++       +  ++  N  I  + +    K               N   LL   
Sbjct: 169 AGLKPEIVSEEEHVRAQRAEALNSTIEVLQQQRAAKQAEAADYRGRIPQYVNNQHLLDDQ 228

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +         M  L    +V+ N++   +R       ++             I E   + 
Sbjct: 229 IQR-------MLPLVGVGSVAPNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKI 281

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             + + +  E   +L + Q         L+  +   ++  I SP+ G +      +    
Sbjct: 282 EEKISTFRSEAREELARKQVQLQALEGTLSGKQDILDRTLIRSPVNGIVKTLYITTIGGV 341

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           A   + ++ IVP +    I A++ P+ I +++ G  A VR   +         A +E I 
Sbjct: 342 ASPGKSVIDIVPTNDSLLIEARIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELIS 401

Query: 372 PIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           P    Q +      YY+V ++   + +A    ++ +  G  AEV       T+   I+ P
Sbjct: 402 PDS--QADERSGSLYYKVQVRTHSSVVATQVGDLNILPGMVAEVDVITGRRTIMSYILRP 459

Query: 430 ITDNWPKI 437
           I     + 
Sbjct: 460 IVRGMSRA 467


>gi|86144280|ref|ZP_01062612.1| HlyD family secretion protein [Vibrio sp. MED222]
 gi|85837179|gb|EAQ55291.1| HlyD family secretion protein [Vibrio sp. MED222]
          Length = 437

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 74/434 (17%), Positives = 166/434 (38%), Gaps = 22/434 (5%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            +N   +L   T    + +I   TWS++  ++    + G ++ E     ++S   G +K+
Sbjct: 18  SQNTARTLALATWSVALCVIAFATWSVVTQVDEIAKAKGAVIPEGEKQVLQSAIGGKLKQ 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V+ G  + +G PL+ F+       ++  K     L   ++   + L            
Sbjct: 78  ILVKEGQLVEKGQPLVEFDATFQRTALEELKSQQVTLLASVERMNALL------------ 125

Query: 130 AFESREEQLLDFLGKYHSTCSKV---FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             E RE  L +F   Y    S+     N   +  ++   +       I      +E    
Sbjct: 126 --EQREPNLAEFEVDYPEIVSQQKAQLNAQKALYFQKRVVLEKESEQIAEQLRSVEKALP 183

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L++ +++L +++  ++   +S+  + +  + +     ++ E   ++  +++  + 
Sbjct: 184 SYEKELNATKQELNILEKGYKAGNISRLRVLEMRQKLASIEQKIEEARGKKAVLIKQADS 243

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +     A    ++S D  +     +   +++   +       ++SP+ G +    S 
Sbjct: 244 TEQKIEQLLAEAKAKVSDDRSKAVSDLSALNARVRSSQAKLTNTMLVSPLQGLVQSLPST 303

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
            +    Q    +++IVP       +A+++P+ I  V  G    ++   +   R    K  
Sbjct: 304 QNGGVIQPGGTVVEIVPVGGKADFKARLSPRDIGFVSVGQPTRIKIDAFDYSRFGALKGA 363

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQ 424
           +E I P  SQ +     + YYEV++ +    F DN  +  +  G   EV  T    ++ Q
Sbjct: 364 VESISPTTSQSER---GEIYYEVVVSVDTPYFRDNPESFSILPGMTGEVDITTGEKSVFQ 420

Query: 425 EIIHPITDNWPKIF 438
            +  PI  N    F
Sbjct: 421 YLWKPIYTNVSVAF 434


>gi|114571039|ref|YP_757719.1| HlyD family type I secretion membrane fusion protein [Maricaulis
           maris MCS10]
 gi|114341501|gb|ABI66781.1| type I secretion membrane fusion protein, HlyD family [Maricaulis
           maris MCS10]
          Length = 436

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 72/428 (16%), Positives = 174/428 (40%), Gaps = 16/428 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             ++R  L+ +IG+ G + W+ L P+   V ++G+I+ E++   ++    GII +  V +
Sbjct: 14  RFVRRSALVCLIGLGGFLAWAGLAPLAEGVPAAGQIVVENDRQVVQHLEGGIIHELLVRD 73

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNN-KYDVLEKA 130
           G Q+  G  LLT ++  +  + D     I  L   +  +   +  L+  +    D L+  
Sbjct: 74  GDQVTAGEALLTLQETASLAVRDELLQEIATLTGSQQRLAALREGLEEPDFSPLDTLDLT 133

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            + R+  +        +  S +F   + S    + +   R      +R     +  + + 
Sbjct: 134 VDQRQAVM--------ARQSDLFRQQMQSFRADIAVLTARRDGARSSRDLHAQQIRVTQR 185

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
           ++++ ++ L++++  +E+     ++L   ER V     ++     + +       +L  +
Sbjct: 186 VIAAAEEQLSLLRERYERQMARLDELRGMERDVAALEADISRLRTDAQQAATLEQDLDGQ 245

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                A +L++IS D  + +        ++   +    +  +++P++G ++  +  +   
Sbjct: 246 IAQTEAAFLRQISADQLEVRSQLEQAGERIAAAQDVLNRSVVVAPLSGEVLNLRFATRGG 305

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  + +++IVP         +V P     V +G     R   Y      +    +  +
Sbjct: 306 VVRPGEAILEIVPAVGEMTASVRVQPADRAAVYEGQAVRTRLTAYKSWMTPRLDGEVISV 365

Query: 371 DPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAK-NTTLAQEIIH 428
              +    N      YYEV ++I  D A     +++  G P EV   +  + T    +  
Sbjct: 366 SADLKTDQNT--GVSYYEVRIRIPADQAARLGELDVIPGMPVEVFIFSGSSRTTLDYLFE 423

Query: 429 PITDNWPK 436
           PI+++  +
Sbjct: 424 PISESLFR 431


>gi|327394552|dbj|BAK11974.1| Leukotoxin secretion protein D LktD [Pantoea ananatis AJ13355]
          Length = 388

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 71/425 (16%), Positives = 139/425 (32%), Gaps = 63/425 (14%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            H      +  L    +   + W+    ++     +G++        I S   GI+K+  
Sbjct: 11  RHERRTSAIIWLCTAALAFFLIWAHFAILDEVTVGTGKVTPSTRAQVIDSLDGGIVKQLN 70

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLE 128
           V  G  + +G  L T +           +  ++ LR     ++ E S +    +     E
Sbjct: 71  VHEGDIVEKGQILATLDPTRFQSNFGEVQARVRTLRASSERLNAELSGIPLKFSAETQKE 130

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               +RE QL +                                     R +L    + L
Sbjct: 131 PQLVARERQLYE-----------------------------------SRRRNLTETINNL 155

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L   Q +L + + L  K A  Q ++ +  R V     +LR  I E +N         
Sbjct: 156 QQSLRLVQDELRLTEPLVAKGAAGQVEVIRLRRQVS----DLRGKIDEARN--------- 202

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                   +YL     +  +N      ++      E    + T+ SP+ G +   Q  + 
Sbjct: 203 --------DYLVRAHEEQVKNNAELDAQLQVAAGKEDQLTRATLYSPVRGIVKDIQVTTV 254

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +    +M+IVP      I  ++ P+ I +++ G  A V+   Y          ++E
Sbjct: 255 GGVLEPGGKMMEIVPLEDQLLIETRINPRDIAYIRPGLAAVVKVTAYDSSIYGDLTGVVE 314

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQE 425
            + P   Q +   + Q YY V ++         +     +  G  A V       ++   
Sbjct: 315 TVSPDTLQDEV-KRDQYYYRVYVRTQKAELTNRAGRRFPIVPGMVANVEIKTGQKSVMDY 373

Query: 426 IIHPI 430
           ++ P+
Sbjct: 374 LLKPL 378


>gi|149916054|ref|ZP_01904577.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. AzwK-3b]
 gi|149810128|gb|EDM69976.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. AzwK-3b]
          Length = 442

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 156/424 (36%), Gaps = 12/424 (2%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
              ++ + +  +  W+    +  +V  SGE+  + ++  ++    GI+K   V  G  + 
Sbjct: 25  GIFMAGLLVAAVFGWAANSNLVSAVVVSGEVSVDRDLRVVQHRDGGIVKDIPVSAGDFVQ 84

Query: 80  QGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           QG  LL+ +D        ++  K   +   +  ++ ++      +    + E        
Sbjct: 85  QGDILLSLDDTSARTERAILHGKIAELAIRKSRLEAQRDLRKEFSVPSGLDELIVSPAAL 144

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q +      +    ++F   +SS     +     +  +      LE +    +  +   +
Sbjct: 145 QAI------YVGEHRIFEGNLSSFISRKEQIDLGIEQVRTEIDGLEARLDAKQDEILLVK 198

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +   +++L E+    +N     ER   +   E  E +         ++EL  E      
Sbjct: 199 AESARVEDLSERQLTVRNVAFSIERENVRLRGEHGEILSALGRARSRVSELELEILSMQE 258

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
               +  R+L + +   ++   K  ++E T  +  I +PI+G I      S       ++
Sbjct: 259 TLRTDAQRELREIETQLSELTEKRFVIEDTLSRTEIRAPISGLINDMNVNSVGGVISPAE 318

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  IVP        A+V    I+ V  GY A +RF  +      + +  +  +    + 
Sbjct: 319 ILATIVPEEAELVFTARVPAVSIEQVDTGYAARMRFVAFDQNETPEIEGTVSYVAA--AA 376

Query: 377 QDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             +     ++Y + + +T    +     ELR G P EV  T    T    ++ P +D + 
Sbjct: 377 TSDPQMPGDFYSIKVDVTPDQLARLGGKELRPGMPVEVYVTTAERTALSYLVKPFSDQFA 436

Query: 436 KIFE 439
           + F+
Sbjct: 437 RAFK 440


>gi|148652570|ref|YP_001279663.1| HlyD family type I secretion membrane fusion protein [Psychrobacter
           sp. PRwf-1]
 gi|148571654|gb|ABQ93713.1| type I secretion membrane fusion protein, HlyD family
           [Psychrobacter sp. PRwf-1]
          Length = 389

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 75/437 (17%), Positives = 152/437 (34%), Gaps = 56/437 (12%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M  + +   K       +    +++IGI  L+ W+    I+    +   ++      E++
Sbjct: 1   MSDYQYTPTK-PKVGGARLSIWIALIGITVLLVWAYFAKIDQVTRAKATVIASARTQEVQ 59

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +   G++ +  V  G  + +G  L+  E+       D        L   +    + +   
Sbjct: 60  ASDGGVLTQILVSEGDDVKKGQLLVVLEEERAQAAFDSSASKSAALEAQLARLNAEI--- 116

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                        R  +  D + KY                        + +     R  
Sbjct: 117 -----------FDRPLRFPDNVRKYPEYVE------------------NQTQLYNRRRQA 147

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +  + S L  +L   QK+L M + L     VSQ D+ +  R V     ++          
Sbjct: 148 INEEVSSLEDMLVLAQKELDMNEPLLAYGDVSQADVIKLRRQVADIKAQI---------- 197

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                      N +   Y ++   ++ + Q     E+ +L    +  ++K +LSP  G +
Sbjct: 198 -----------NNKRNKYFEDAQAEMTKAQEDLDAELEQLRDRSQVLQEKRLLSPQDGKV 246

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 +     +  + +M+++P S    + AKV+P  I +V++G  A+V+   Y     
Sbjct: 247 NNINITTIGGVVKPGEVIMELLPTSSDLIVEAKVSPADIAYVQEGQVASVKLDAYDFSIF 306

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAK 418
              +  +  I P    +      + YY V++KI    F+     I ++ G  A V   A 
Sbjct: 307 GAMRGTVTYISPDTLLEKTPKGDEPYYRVLIKIGKAEFAGRGDEIVIKPGMTASVDIKAM 366

Query: 419 NTTLAQEIIHPITDNWP 435
             ++   +  PIT    
Sbjct: 367 ERSVLSYLTKPITKTLS 383


>gi|126455129|ref|YP_001066324.1| HlyD family secretion protein [Burkholderia pseudomallei 1106a]
 gi|167845601|ref|ZP_02471109.1| HlyD family secretion protein [Burkholderia pseudomallei B7210]
 gi|242316802|ref|ZP_04815818.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 1106b]
 gi|126228771|gb|ABN92311.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 1106a]
 gi|242140041|gb|EES26443.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 1106b]
          Length = 469

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 67/428 (15%), Positives = 150/428 (35%), Gaps = 16/428 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
               +   +  + +  +I L+ W+    I+I  +  G+++    V ++ +   GI+++  
Sbjct: 52  PARRAAALIPTVMLALLIVLVLWATFFKIDIIAAGQGKVIPSTTVQQLSTLEGGIVRELL 111

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G  + +G PL+  + +     +  +  + + L   I   ++  D             
Sbjct: 112 VREGQIVKKGQPLVRLDPVVAQGAVTEQAATREGLMASIARLQAEADGKATPLYP----- 166

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              + +++       +  ++  N  I  + +    K               N   LL   
Sbjct: 167 AGLKPEIVSEEEHVRAQRAEALNSTIEVLQQQRAAKQAEAADYRGRIPQYVNNQHLLDDQ 226

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +         M  L    +V+ N++   +R       ++             I E   + 
Sbjct: 227 IQR-------MLPLVGVGSVAPNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKI 279

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             + + +  E   +L + Q         L+  +   ++  I SP+ G +      +    
Sbjct: 280 EEKISTFRSEAREELARKQVQLQALEGTLSGKQDILDRTLIRSPVNGIVKTLYITTIGGV 339

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           A   + ++ IVP +    I A++ P+ I +++ G  A VR   +         A +E I 
Sbjct: 340 ASPGKSVIDIVPTNDSLLIEARIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELIS 399

Query: 372 PIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           P    Q +      YY+V ++   + +A    ++ +  G  AEV       T+   I+ P
Sbjct: 400 PDS--QADERSGSLYYKVQVRTHSSVVATQVGDLNILPGMVAEVDVITGRRTIMSYILRP 457

Query: 430 ITDNWPKI 437
           I     + 
Sbjct: 458 IVRGMSRA 465


>gi|291618156|ref|YP_003520898.1| LktD [Pantoea ananatis LMG 20103]
 gi|291153186|gb|ADD77770.1| LktD [Pantoea ananatis LMG 20103]
          Length = 388

 Score =  278 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 71/425 (16%), Positives = 139/425 (32%), Gaps = 63/425 (14%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            H      +  L    +   + W+    ++     +G++        I S   GI+K+  
Sbjct: 11  RHERRTSAIIWLCTAALAFFLIWAHFAILDEVTVGTGKVTPSTRAQVIDSLDGGIVKQLN 70

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLE 128
           V  G  + +G  L T +           +  ++ LR     ++ E S +    +     E
Sbjct: 71  VHEGDIVEKGQILATLDPTRFQSNFGEVQARVRTLRASSERLNAELSGIPLKFSAETQKE 130

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               +RE QL +                                     R +L    + L
Sbjct: 131 PQLVARERQLYE-----------------------------------SRRRNLTETINNL 155

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L   Q +L + + L  K A  Q ++ +  R V     +LR  I E +N         
Sbjct: 156 QQSLRLVQDELRLTEPLVAKGAAGQVEVIRLRRQVS----DLRGKIDEARN--------- 202

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                   +YL     +  +N      ++      E    + T+ SP+ G +   Q  + 
Sbjct: 203 --------DYLVRAHEEQVKNNAELDAQLQVAAGKEDQLTRATLYSPVRGIVKDIQVTTV 254

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +    +M+IVP      I  ++ P+ I +++ G  A V+   Y          ++E
Sbjct: 255 GGVLEPGGKMMEIVPLEDQLLIETRINPRDIAYIRPGLAAVVKVTAYDSSIYGDLTGVVE 314

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQE 425
            + P   Q +   + Q YY V ++         +     +  G  A V       ++   
Sbjct: 315 TVSPDTLQDEV-KRDQYYYRVYVRTQKAELINRAGRRFPIVPGMVANVEIKTGQKSVMDY 373

Query: 426 IIHPI 430
           ++ P+
Sbjct: 374 LLKPL 378


>gi|26246260|ref|NP_752299.1| putative membrane spanning export protein [Escherichia coli CFT073]
 gi|26106658|gb|AAN78843.1|AE016756_26 Putative membrane spanning export protein [Escherichia coli CFT073]
          Length = 420

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 70/437 (16%), Positives = 157/437 (35%), Gaps = 64/437 (14%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            +   L++    +L  M +  ++ ++  + W+   P++      G I+       I++  
Sbjct: 30  DVQAALQQEKHHALFLMVIFLLVLVVTFVIWAWNSPLDEVTRGQGSIIPGSREQVIQTLD 89

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI+K  +V  G  + +G  LLT +D  ++ ++   +  + NL       ++        
Sbjct: 90  PGILKTLEVREGDIVEKGQVLLTLDDTRSSAMLRESEARVNNLEAVRARLRAEA------ 143

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                   + S  F   + +  R  +  + R+R     + +L  
Sbjct: 144 -----------------------YSESLTFPDDVPADLRERESTVYRLR-----KTELAQ 175

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + L+   +   K++ M + +  + A+S+ +L + +R                      
Sbjct: 176 SIAGLKQSKALLDKEIAMTRPIVREGAMSEVELLRMQR---------------------Q 214

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             EL  + + +   YL E   +L + +   A     +       E+  I +P+ G +   
Sbjct: 215 SAELQLQMDEKQNKYLTEAGAELVKTEAELAQAKENMAGRADPVERSRIRAPLRGIVKNI 274

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +        Q +M+I+P      I A + P+ + +V+ G  A V+   Y        
Sbjct: 275 RVNTLGGVVSAGQDIMEIIPLEDQLLIEAYINPRDVAYVRTGMPALVKLTAYDYAIYGGL 334

Query: 364 KAIIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAEVL 414
             ++  + P   +             + YY V++  ++   +D N   + +  G  A V 
Sbjct: 335 DGVVTLVSPDTLRDQKRPGDLKLDPNEAYYRVLVTTSNNYLTDRNGKILPVIPGMIASVD 394

Query: 415 FTAKNTTLAQEIIHPIT 431
                 ++ Q +I PIT
Sbjct: 395 IKTGQKSVFQYLIKPIT 411


>gi|227884768|ref|ZP_04002573.1| type I secretion membrane fusion protein [Escherichia coli 83972]
 gi|300984116|ref|ZP_07176869.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 45-1]
 gi|301045857|ref|ZP_07193044.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 185-1]
 gi|227838249|gb|EEJ48715.1| type I secretion membrane fusion protein [Escherichia coli 83972]
 gi|300302107|gb|EFJ58492.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 185-1]
 gi|300408428|gb|EFJ91966.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 45-1]
 gi|307552148|gb|ADN44923.1| HlyD family secretion protein [Escherichia coli ABU 83972]
 gi|315293000|gb|EFU52352.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 153-1]
 gi|315300058|gb|EFU59296.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 16-3]
          Length = 415

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 70/437 (16%), Positives = 157/437 (35%), Gaps = 64/437 (14%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            +   L++    +L  M +  ++ ++  + W+   P++      G I+       I++  
Sbjct: 25  DVQAALQQEKHHALFLMVIFLLVLVVTFVIWAWNSPLDEVTRGQGSIIPGSREQVIQTLD 84

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI+K  +V  G  + +G  LLT +D  ++ ++   +  + NL       ++        
Sbjct: 85  PGILKTLEVREGDIVEKGQVLLTLDDTRSSAMLRESEARVNNLEAVRARLRAEA------ 138

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                   + S  F   + +  R  +  + R+R     + +L  
Sbjct: 139 -----------------------YSESLTFPDDVPADLRERESTVYRLR-----KTELAQ 170

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + L+   +   K++ M + +  + A+S+ +L + +R                      
Sbjct: 171 SIAGLKQSKALLDKEIAMTRPIVREGAMSEVELLRMQR---------------------Q 209

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             EL  + + +   YL E   +L + +   A     +       E+  I +P+ G +   
Sbjct: 210 SAELQLQMDEKQNKYLTEAGAELVKTEAELAQAKENMAGRADPVERSRIRAPLRGIVKNI 269

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +        Q +M+I+P      I A + P+ + +V+ G  A V+   Y        
Sbjct: 270 RVNTLGGVVSAGQDIMEIIPLEDQLLIEAYINPRDVAYVRTGMPALVKLTAYDYAIYGGL 329

Query: 364 KAIIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAEVL 414
             ++  + P   +             + YY V++  ++   +D N   + +  G  A V 
Sbjct: 330 DGVVTLVSPDTLRDQKRPGDLKLDPNEAYYRVLVTTSNNYLTDRNGKILPVIPGMIASVD 389

Query: 415 FTAKNTTLAQEIIHPIT 431
                 ++ Q +I PIT
Sbjct: 390 IKTGQKSVFQYLIKPIT 406


>gi|71066153|ref|YP_264880.1| hlyD family secretion protein [Psychrobacter arcticus 273-4]
 gi|71039138|gb|AAZ19446.1| hlyD family secretion protein [Psychrobacter arcticus 273-4]
          Length = 389

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 78/422 (18%), Positives = 154/422 (36%), Gaps = 55/422 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             +    + +IGI+ L+ W+    I+    +   ++      EI++P  G++ +  V  G
Sbjct: 15  RSRLSIWIGLIGIVVLLVWASFAKIDQVTRAKATVIASARTQEIQAPEGGVLTELAVTEG 74

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++  G  L+  E+      +D    +   L+  +    + +     +  ++        
Sbjct: 75  QEVKAGQLLVVLEEERAKAALDNSASNTAALKAKLARLNAEI----FEKPLVFTKDVKNY 130

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            + +      ++   +  N  +SS                            L  +L   
Sbjct: 131 PEYVQNQTALYNRRRQAINEEVSS----------------------------LEVMLVLA 162

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +K+L+M + L E   VSQ D+ +  R V     ++                     N + 
Sbjct: 163 EKELSMNEPLLEYGDVSQADVIKLHRQVADIEAQI---------------------NNKR 201

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y +E   ++ + Q     E+ +L       E+K ++SP  G I      +     +  
Sbjct: 202 NKYFEEAQAEMTKAQEELDTELEQLRDRVHVLEEKRLMSPTDGKIKNINVTTIGGVVKPG 261

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + +++I+P S    I AKV+P  I +VK+G  ATV+   Y           +  I P   
Sbjct: 262 EVILQILPTSSDLIIDAKVSPADIAYVKEGQKATVKLDAYDYSIFGAMNGTVSYISPDTL 321

Query: 376 QQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
            +      + YY V++ IT   F   +++I ++ G  A V   A   T+   +  PIT  
Sbjct: 322 MEQTPKGEEPYYRVLIIITGAEFKGREDSIVIKPGMTASVDIKAMERTVLSYLTKPITKT 381

Query: 434 WP 435
             
Sbjct: 382 LS 383


>gi|84387910|ref|ZP_00990924.1| HlyD family secretion protein [Vibrio splendidus 12B01]
 gi|84377256|gb|EAP94125.1| HlyD family secretion protein [Vibrio splendidus 12B01]
          Length = 437

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 75/434 (17%), Positives = 166/434 (38%), Gaps = 22/434 (5%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            +N   +L   T    + +I   TWS++  ++    + G ++ E     ++S   G +K+
Sbjct: 18  SQNTARTLALATWSVALCVIAFATWSVVTQVDEIAKAKGAVIPEGEKQVLQSAIGGKLKQ 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V+ G  + +G PL+ F+       ++  K     L   ++   + L            
Sbjct: 78  IFVKEGQLVEKGQPLVEFDATFQRTALEELKSQQVTLLASVERMNALL------------ 125

Query: 130 AFESREEQLLDFLGKYHSTCSKV---FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             E RE  L +F   Y    S+     N   +  ++   +       I      +E    
Sbjct: 126 --EQREPNLAEFEVDYPEIVSQQKAQLNAQKALYFQKRVVLEKESEQIAEQLRSVEKALP 183

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L++ +++L +++  ++   +S+  + +  + +     ++ E   ++  ++R  + 
Sbjct: 184 SYEKELNATKQELNILEKGYKAGNISRLRVLEMRQKLASIEQKIEEARGKKSVLIRQADS 243

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +     A    ++S D  +     +   +++   +       ++SP+ G +    S 
Sbjct: 244 NDQKIIQLLAEAKAKVSDDRSKAVSDLSALNARVRSSQAKLTNTMLVSPLQGLVQSLPST 303

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
            +    Q    +++IVP       +A+++P+ I  V  G    ++   +   R    K  
Sbjct: 304 QNGGVIQPGGTVVEIVPVGGKADFKARLSPRDIGFVSVGQPTRIKIDAFDYSRFGALKGA 363

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQ 424
           +E I P  SQ +     + YYEV++ +    F DN  +  +  G   EV  T    ++ Q
Sbjct: 364 VESISPTTSQSER---GEIYYEVVVSVDVPYFRDNPESFSILPGMTGEVDITTGEKSVFQ 420

Query: 425 EIIHPITDNWPKIF 438
            +  PI  N    F
Sbjct: 421 YLWKPIYTNVSVAF 434


>gi|53719290|ref|YP_108276.1| putative toxin-related secretion protein [Burkholderia pseudomallei
           K96243]
 gi|76810044|ref|YP_333590.1| HlyD family secretion protein [Burkholderia pseudomallei 1710b]
 gi|167738469|ref|ZP_02411243.1| HlyD family secretion protein [Burkholderia pseudomallei 14]
 gi|167824069|ref|ZP_02455540.1| HlyD family secretion protein [Burkholderia pseudomallei 9]
 gi|167910818|ref|ZP_02497909.1| HlyD family secretion protein [Burkholderia pseudomallei 112]
 gi|167918850|ref|ZP_02505941.1| HlyD family secretion protein [Burkholderia pseudomallei BCC215]
 gi|52209704|emb|CAH35663.1| putative toxin-related secretion protein [Burkholderia pseudomallei
           K96243]
 gi|76579497|gb|ABA48972.1| HlyD family secretion protein [Burkholderia pseudomallei 1710b]
          Length = 471

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 66/428 (15%), Positives = 150/428 (35%), Gaps = 16/428 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
               +   +  + +  +I L+ W+    I+I  +  G+++    V ++ +   GI+++  
Sbjct: 54  PARRAAALIPTVMLALLIVLVLWATFFKIDIIAAGQGKVIPSTTVQQLSTLEGGIVRELL 113

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G  + +G PL+  + +     +  +  + + L   I   ++  D             
Sbjct: 114 VREGQIVKKGQPLVRLDPVVAQGAVTEQAATREGLMASIARLQAEADGKATPLYP----- 168

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              + +++       +  ++  N  I  + +    K               N   LL   
Sbjct: 169 AGLKPEIVSEEEHVRAQRAEALNSTIEVLQQQRAAKQAEAADYRGRIPQYVNNQHLLDDQ 228

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +         M  L    +V+ N++   +R       ++             I E   + 
Sbjct: 229 IQR-------MLPLVGVGSVAPNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKI 281

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             + + +  E   +L + Q         L+  +   ++  I SP+ G +      +    
Sbjct: 282 EEKISTFRSEAREELARKQVQLQALEGTLSGKQDILDRTLIRSPVNGIVKTLYITTIGGV 341

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           A   + ++ IVP +    I A++ P+ I +++ G  A VR   +         A +E I 
Sbjct: 342 ASPGKSVIDIVPTNDSLLIEARIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELIS 401

Query: 372 PIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           P    Q +      YY+V ++   + +A    ++ +  G  A+V       T+   I+ P
Sbjct: 402 PDS--QADERSGSLYYKVQVRTHSSVVATQVGDLNILPGMVADVDVITGRRTIMSYILRP 459

Query: 430 ITDNWPKI 437
           I     + 
Sbjct: 460 IVRGMSRA 467


>gi|149912601|ref|ZP_01901135.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. AzwK-3b]
 gi|149813007|gb|EDM72833.1| type I secretion membrane fusion protein, HlyD family [Roseobacter
           sp. AzwK-3b]
          Length = 442

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 72/447 (16%), Positives = 162/447 (36%), Gaps = 16/447 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSII----GIIGLITWSILLPIEISVSSSGEILNEDNV 56
           + +    N  ++   +++   +  ++     +  +  W+    +  +V  SGE+    ++
Sbjct: 2   IRNSKTPNAPQDAVYAIRGRVIAGLVMATLLVAAIFGWAANANLASAVVVSGEVSVNRDL 61

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTE 113
             ++    GI+K+     G  + +G  LL  +D        ++  K   +   +  ++ +
Sbjct: 62  RVVQHRDGGIVKEIPASAGDYVREGDILLRLDDTSARTERAILHGKIAELAIRKSRLEAQ 121

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +  +        + E        Q +      +    ++F   ISS     +     +  
Sbjct: 122 RDLMAEFPMPAGLDELIVTPAALQAI------YVGERRIFQGNISSFVSRKEQIDLGIEQ 175

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +      LE +    +  +   Q +   +++L E+    +N     ER   +   E  E 
Sbjct: 176 VRTEIDGLEARLDAKQDEILLVQAESARVEDLSERRLTVRNVAFSIERENVRLRGERGEI 235

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +         ++EL  E          +  R+L + +   ++   K  ++E T  +  I 
Sbjct: 236 LSALGRARSRVSELELEILSMQETLRTDAQRELREIETQLSELTEKRFVIEDTLSRTEIR 295

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +PI+G I      S       ++ L  IVP        A+V    I+ V  GY A +RF 
Sbjct: 296 APISGLINDLNVNSVGGVISPAEILATIVPEEAELVFTARVPAVSIEQVDTGYAARMRFV 355

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAE 412
            +      + +  +  +    +   +     ++Y + + ++ D        ELR G P E
Sbjct: 356 AFDQNETPEIEGTVSYVAA--AATSDPQMPGDFYSIKVDVSGDQLARLGGKELRPGMPVE 413

Query: 413 VLFTAKNTTLAQEIIHPITDNWPKIFE 439
           V  T    T    ++ P +D + + F+
Sbjct: 414 VYVTTAERTALSYLVKPFSDQFARAFK 440


>gi|283835667|ref|ZP_06355408.1| protein secretion ABC efflux system, membrane fusion protein
           [Citrobacter youngae ATCC 29220]
 gi|291068882|gb|EFE06991.1| protein secretion ABC efflux system, membrane fusion protein
           [Citrobacter youngae ATCC 29220]
          Length = 396

 Score =  277 bits (708), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 63/431 (14%), Positives = 138/431 (32%), Gaps = 61/431 (14%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           + +  +   R+ LLS +    L  W+    ++   + SG+++       ++S   GI+ +
Sbjct: 17  REHRFSGASRIILLSSLLFAVLGVWAYFGKLDEVSTGSGKVIPSSREQVLQSLDGGILAE 76

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V  G ++     +   +   +   +                  ++   LN + + L  
Sbjct: 77  LTVREGDKVQANQIVARLDPTRSESNVGESA-------ARYRASLASSARLNAEVNDLPL 129

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F        D +                          +  R     R  L +  + L+
Sbjct: 130 VFPDSLRAWPDLIA-------------------------SETRLYKSRRAQLADSMTELQ 164

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L S  K+L + + L +  A S  ++ + +R      L++ +   +             
Sbjct: 165 DALVSVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------- 211

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                   Y  +    L +         + L   E +  + T+ +P+ G +   Q  +  
Sbjct: 212 --------YFVQAREALSKANAEVDMLAAILKGREDSVTRLTVRAPMRGIVKNIQVTTIG 263

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                +  +M+IVP      I  +++P+ I  +  G  A V+   Y        + ++E 
Sbjct: 264 GVIPPNGEMMEIVPIDDHLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLEGVVET 323

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQEI 426
           I P   Q     +   YY V ++       +    +  +  G  A V       T+   +
Sbjct: 324 ISPDTIQDKVKPEI-FYYRVFIRTHQDYLENKLGRHFSIVPGMIATVDIKTGEKTIVDYL 382

Query: 427 IHPITDNWPKI 437
           I P    + + 
Sbjct: 383 IKP----FNRA 389


>gi|134277898|ref|ZP_01764613.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 305]
 gi|167719465|ref|ZP_02402701.1| HlyD family secretion protein [Burkholderia pseudomallei DM98]
 gi|167815661|ref|ZP_02447341.1| HlyD family secretion protein [Burkholderia pseudomallei 91]
 gi|167894153|ref|ZP_02481555.1| HlyD family secretion protein [Burkholderia pseudomallei 7894]
 gi|167902583|ref|ZP_02489788.1| HlyD family secretion protein [Burkholderia pseudomallei NCTC
           13177]
 gi|217421291|ref|ZP_03452795.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 576]
 gi|226197315|ref|ZP_03792892.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei Pakistan 9]
 gi|237812364|ref|YP_002896815.1| HlyD family secretion protein [Burkholderia pseudomallei MSHR346]
 gi|254179719|ref|ZP_04886318.1| HlyD family secretion protein [Burkholderia pseudomallei 1655]
 gi|254188885|ref|ZP_04895396.1| HlyD family secretion protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254259659|ref|ZP_04950713.1| HlyD family secretion protein [Burkholderia pseudomallei 1710a]
 gi|254297569|ref|ZP_04965022.1| HlyD family secretion protein [Burkholderia pseudomallei 406e]
 gi|134251548|gb|EBA51627.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 305]
 gi|157807870|gb|EDO85040.1| HlyD family secretion protein [Burkholderia pseudomallei 406e]
 gi|157936564|gb|EDO92234.1| HlyD family secretion protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|184210259|gb|EDU07302.1| HlyD family secretion protein [Burkholderia pseudomallei 1655]
 gi|217395033|gb|EEC35051.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei 576]
 gi|225930694|gb|EEH26704.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           pseudomallei Pakistan 9]
 gi|237506580|gb|ACQ98898.1| HlyD family secretion protein [Burkholderia pseudomallei MSHR346]
 gi|254218348|gb|EET07732.1| HlyD family secretion protein [Burkholderia pseudomallei 1710a]
          Length = 469

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 66/428 (15%), Positives = 150/428 (35%), Gaps = 16/428 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
               +   +  + +  +I L+ W+    I+I  +  G+++    V ++ +   GI+++  
Sbjct: 52  PARRAAALIPTVMLALLIVLVLWATFFKIDIIAAGQGKVIPSTTVQQLSTLEGGIVRELL 111

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G  + +G PL+  + +     +  +  + + L   I   ++  D             
Sbjct: 112 VREGQIVKKGQPLVRLDPVVAQGAVTEQAATREGLMASIARLQAEADGKATPLYP----- 166

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              + +++       +  ++  N  I  + +    K               N   LL   
Sbjct: 167 AGLKPEIVSEEEHVRAQRAEALNSTIEVLQQQRAAKQAEAADYRGRIPQYVNNQHLLDDQ 226

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +         M  L    +V+ N++   +R       ++             I E   + 
Sbjct: 227 IQR-------MLPLVGVGSVAPNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKI 279

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             + + +  E   +L + Q         L+  +   ++  I SP+ G +      +    
Sbjct: 280 EEKISTFRSEAREELARKQVQLQALEGTLSGKQDILDRTLIRSPVNGIVKTLYITTIGGV 339

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           A   + ++ IVP +    I A++ P+ I +++ G  A VR   +         A +E I 
Sbjct: 340 ASPGKSVIDIVPTNDSLLIEARIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELIS 399

Query: 372 PIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           P    Q +      YY+V ++   + +A    ++ +  G  A+V       T+   I+ P
Sbjct: 400 PDS--QADERSGSLYYKVQVRTHSSVVATQVGDLNILPGMVADVDVITGRRTIMSYILRP 457

Query: 430 ITDNWPKI 437
           I     + 
Sbjct: 458 IVRGMSRA 465


>gi|218529944|ref|YP_002420760.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium chloromethanicum CM4]
 gi|218522247|gb|ACK82832.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium chloromethanicum CM4]
          Length = 448

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 143/410 (34%), Gaps = 17/410 (4%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    +  ++ +SG +  +     ++    G++ +  V +G  +     LL  +D +T 
Sbjct: 48  WAATTDLSGAILASGSVAVDQRAKSVQHRDGGVVGEILVRDGQPVTASQVLLRIDDAQTR 107

Query: 94  DLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + +   + V +   +  +  E+     ++    +L +  E         +        
Sbjct: 108 AELAIVKGQLVELAAKKARLLAERDGQREVSFPQALLHQGLE---------VQSILEGEL 158

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++F   ++S     +    ++  I      L  +    R  L+    +   +  L EK  
Sbjct: 159 RLFRGNLASRDSQRQQLELQIGQIAEEIAGLTKQRDAKRDELAVLTTEHGKLSILVEKQL 218

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              +      R  ++   E               +E+  +          E  R+L Q  
Sbjct: 219 YESSRFLPITRDKHRLAGEQGSLEASIARAKTRTSEIRVQILAIADTARTEAQRELSQVD 278

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A+  ++   L+    +  I +P+ G +   ++F+       +  L  +VP      I
Sbjct: 279 AKAAELSNRRVALDDRLTRTEIRAPVTGILHELKTFTVGGVVTPADILATVVPEDARLKI 338

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
             ++ P  I  +  G  A VRF  ++     + K ++  + P  ++   +   + +Y   
Sbjct: 339 EIRIPPTSIDQIGVGRAARVRFTAFSQRTTPELKGVLTYVSPSTTKGPRD---EAFYIGH 395

Query: 391 LKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           +++ D  +     +  L  G P EV       T    ++ P+ D + + F
Sbjct: 396 VELKDGEIERLGGSARLIPGMPVEVQVATDERTAMSYLMKPLQDQFSRAF 445


>gi|317049412|ref|YP_004117060.1| HlyD family type I secretion membrane fusion protein [Pantoea sp.
           At-9b]
 gi|316951029|gb|ADU70504.1| type I secretion membrane fusion protein, HlyD family [Pantoea sp.
           At-9b]
          Length = 406

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 147/432 (34%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
               H +   R+ ++S + ++    W+    ++   + +G+++   +   ++S   GI+ 
Sbjct: 26  QSETHYSGAVRLIVISALLLLVTCVWAYFGVLDEVSTGTGKVIPSSHDQVLQSLEGGILD 85

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  GS +  G  +   + I +   +       +          +A   LN + + L 
Sbjct: 86  EIYVHEGSHVEAGQVVAKLDPIRSESSVGESAARYRAA-------LAASARLNAEVNDLP 138

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            +F +   +  D +                          +  R     R  L++ ++ +
Sbjct: 139 LSFPAELNKFPDLIA-------------------------SETRLYKTRRAQLKDSTAQI 173

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L+   ++L + + L +  A S  ++ + +R      L++ +   +            
Sbjct: 174 QQSLNLANRELAITERLAKTGAASSVEVLRLQRDKSDLELKMTDMRSQ------------ 221

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +   DL +        +  +   E T  + TI +P+ G +   +  + 
Sbjct: 222 ---------YYVQAREDLAKATAEADSLLQTVRGREDTVSRLTIRAPMRGVVKDIKVTTV 272

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  LM IVP      I A+++P+ I  +     A V+   Y        + ++E
Sbjct: 273 GGVIPPNGELMNIVPMDDHLLIEARLSPRDIAFIHPDQKALVKISAYDYSIYGGLEGVVE 332

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q +   +   YY V ++         +     +  G  A V       T+   
Sbjct: 333 SISPDTIQDEVKPEI-YYYRVYIRTDHDFVQNKAGKRFSISPGMVATVDIKTGEKTVMDY 391

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 392 LIKP----FNRA 399


>gi|60615282|gb|AAX31148.1| putative HlyD family secretion protein [Burkholderia pseudomallei]
          Length = 471

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 150/428 (35%), Gaps = 16/428 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
               +   +  + +  +I L+ W+    I+I  +  GE++    V ++ +   GI+++  
Sbjct: 54  PARRAAALIPTVMLALLIVLVLWATFFKIDIIAAGQGEVIPSTTVQQLSTLEGGIVRELL 113

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G  + +G PL+  + +     +  +  + + L   I   ++  D             
Sbjct: 114 VREGQIVKKGQPLVRLDPVVAQGAVTEQAATREGLMASIARLQAEADGKATPLYP----- 168

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              + +++       +  ++  N  I  + +    K               N   LL   
Sbjct: 169 AGLKPEIVSEEEHVRAQRAEALNSTIEVLQQQRAAKQAEAADYRGRIPQYVNNQHLLDDQ 228

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +         M  L    +V+ N++   +R       ++             I E   + 
Sbjct: 229 IQR-------MLPLVGVGSVAPNEITNLQRERGNLAAQIITTREGAAQASAQIAEASHKI 281

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             + + +  E   +L + Q         L+  +   ++  I SP+ G +      +    
Sbjct: 282 EEKISTFRSEAREELARKQVQLQALEGTLSGKQDILDRTLIRSPVNGIVKTLYITTIGGV 341

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           A   + ++ IVP +    I A++ P+ I +++ G  A VR   +         A +E I 
Sbjct: 342 ASPGKSVIDIVPTNDSLLIEARIQPQDIAYIRVGDDAKVRITAFDSGALGSLDAKVELIS 401

Query: 372 PIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           P    Q +      YY+V ++   + +A    ++ +  G  AEV       T+   I+ P
Sbjct: 402 PDS--QADERSGSLYYKVQVRTHSSVVATQVGDLNILPGMVAEVDVITGRRTIMSYILRP 459

Query: 430 ITDNWPKI 437
           I     + 
Sbjct: 460 IVRGMSRA 467


>gi|149912534|ref|ZP_01901068.1| type I secretion membrane fusion protein, HlyD family, putative
           [Roseobacter sp. AzwK-3b]
 gi|149812940|gb|EDM72766.1| type I secretion membrane fusion protein, HlyD family, putative
           [Roseobacter sp. AzwK-3b]
          Length = 437

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 143/410 (34%), Gaps = 12/410 (2%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WS++  I  +V +SG +  E N   ++ P  G++ +  V+    + +G  L+  +  +  
Sbjct: 35  WSVMARISGAVVTSGTVTVESNRQVVQHPDGGVVGEILVDESDTVAKGEVLIRLDGRKQR 94

Query: 94  DLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + + +  ++     +  +  E+   D +N    +L  A  S E      +        
Sbjct: 95  SELAIVEGQLREIAARKARLVAERDGADTINYSDQLLTDAATSPE------VAAMVKGER 148

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +F     S+ +  ++   + + I      ++ +   L        ++L   + L     
Sbjct: 149 TLFEARRDSLRQEARLLREQNKQIDQRITGIDAQLRALETQADLVGEELRDQQRLLANQL 208

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +N+ +R       ++     +   +                   +E    L   Q
Sbjct: 209 TQVARVNELKREEANLLGQIGRLEAQMAELRGQAASNDISLLQLETRRREEAVSTLRDLQ 268

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +   +   LE T  +  I +P++G +   Q F+  +  + + PL+ I+P  +   +
Sbjct: 269 FREIELAERKLDLEDTLSRLDIRAPVSGLVYNLQVFAEQSVVRPADPLLYIIPQDQALVV 328

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A+V    +  +  G  A +RFP +   +  +    + K+   + Q +       YY   
Sbjct: 329 AARVESLNVNDIYVGQQAALRFPGFDQKKTPELFGQVTKVSADVVQDE--ATGMNYYAAE 386

Query: 391 LKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +   +   +   +  L  G P E        +    +  P+   + + F 
Sbjct: 387 IMPYETELAKLGDERLLPGMPVEAFIQTGERSPIAYLAEPMLGFFNRAFR 436


>gi|149197686|ref|ZP_01874736.1| HlyD family secretion protein [Lentisphaera araneosa HTCC2155]
 gi|149139256|gb|EDM27659.1| HlyD family secretion protein [Lentisphaera araneosa HTCC2155]
          Length = 502

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 70/461 (15%), Positives = 166/461 (36%), Gaps = 50/461 (10%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           I +I +I WS    IEI     G+ +    +  I++   GII K   + G  + QG  L+
Sbjct: 41  IFVIFIIVWSHFSEIEIITRGMGKAVPSKEIQTIQNLEGGIISKMNAKEGQSVKQGELLI 100

Query: 86  TFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDV---------LEKAFES 133
             ++ +        +   ++ +     +  E   L  L+   ++             FE+
Sbjct: 101 KLDNSKYLSAFKEMEADRRSTKCNLTRLYAEYKNLPTLDFSDELKMDELLCKTQSNLFEA 160

Query: 134 REEQLLDFLGKYHST---------CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE-- 182
           R +Q    +  Y              ++    + +     + +    +++  N + LE  
Sbjct: 161 RRKQYSSRISGYEVKIKHLKVELFEQELSLVRLRAEMNQAEPEFKDFKTVNENMVALETR 220

Query: 183 ----------NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                      + + +++  +  +K+L   ++L +  A S  ++ + ER V      L+ 
Sbjct: 221 LYETRKKIYEAQKTSIKSNQNILRKELEQTRDLEKNGAASMVEVLRLERQVMDMESALQS 280

Query: 233 NIHEQKNMLRHINELYDEANLEF---------------ANYLKEISRDLEQNQRTFADEM 277
               +   +    E   ++ ++                A++  EI+  +   +   +   
Sbjct: 281 LESTRLRDITMSIESRKQSKVKLEGLLVDSESARSQFEADWFNEIASSIADYEAKLSAVK 340

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
            K++ L  T ++  I SP+ G I      +        QP+++I+P  +   +   V+P+
Sbjct: 341 EKISSLRDTVDRTEIKSPVDGVINEVFQRNEGGVVSPGQPILEIIPDDEKLVVEGMVSPQ 400

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           ++  ++KG    V+   Y           +  I        +      +Y+V+++     
Sbjct: 401 EVAFLRKGMPVIVKITAYDYSVYGGLDGELVHISADT--HTDESTGAPFYKVLVETEKNY 458

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             + N ++  G  A++       ++    I PI +    +F
Sbjct: 459 LMEENNKVIPGMTAQLDILTGKRSVLNYFISPIYNAQSTVF 499


>gi|254560785|ref|YP_003067880.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens DM4]
 gi|254268063|emb|CAX23935.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens DM4]
          Length = 448

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 143/410 (34%), Gaps = 17/410 (4%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    +  ++ +SG +  +     ++    G++ +  V +G  +     LL  +D +T 
Sbjct: 48  WAATTDLSGAILASGSVAVDQRAKSVQHRDGGVVGEILVRDGQPVTASQVLLRIDDAQTR 107

Query: 94  DLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + +   + V +   +  +  E+     ++    +L +  E         +        
Sbjct: 108 AELAIVKGQLVELAAKKARLLAERDGQREVSFPQALLHQGAE---------VQSILEGEV 158

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++F   ++S     +    ++  I      L  +    R  L+    +   +  L EK  
Sbjct: 159 RLFRGNLASRDSQRQQLELQIGQIAEEIAGLTKQRDAKRDELAVLTTEHGKLSILVEKQL 218

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              +      R  ++   E               +E+  +          E  R+L Q  
Sbjct: 219 YESSRFLPITRDKHRLAGEQGSLEASIARAKTRTSEIRVQILAIADTARTEAQRELSQVD 278

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A+  ++   L+    +  I +P+ G +   ++F+       +  L  +VP      I
Sbjct: 279 AKAAELSNRRVALDDRLTRTEIRAPVTGILHELKTFTVGGVVTPADILATVVPEDARLKI 338

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
             ++ P  I  +  G  A VRF  ++     + K ++  + P  ++   +   + +Y   
Sbjct: 339 EIRIPPTSIDQIGVGRAARVRFTAFSQRTTPELKGVLTYVSPSTTKGPRD---EAFYIGH 395

Query: 391 LKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           +++ D  +     +  L  G P EV       T    ++ P+ D + + F
Sbjct: 396 VELKDGEIERLGGSARLIPGMPVEVQVATDERTAMSYLMKPLQDQFSRAF 445


>gi|306812110|ref|ZP_07446308.1| type I secretion membrane fusion protein [Escherichia coli NC101]
 gi|305854148|gb|EFM54586.1| type I secretion membrane fusion protein [Escherichia coli NC101]
          Length = 415

 Score =  276 bits (706), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 70/437 (16%), Positives = 157/437 (35%), Gaps = 64/437 (14%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            +   L++    +L  M +  ++ ++  + W+   P++      G I+       I++  
Sbjct: 25  DVQAALQQEKHHALFLMVIFLLVLVVTFVIWAWNSPLDEVTRGQGSIIPGSREQVIQTLD 84

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI+K  +V  G  + +G  LLT +D  ++ ++   +  + NL       ++        
Sbjct: 85  PGILKTLEVREGDIVEKGQVLLTLDDTRSSAMLRESEARVNNLEAVRARLRAEA------ 138

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                   + S  F   + +  R  +  + R+R     + +L  
Sbjct: 139 -----------------------YSESLTFPDDVPADLRERESTVYRLR-----KTELAQ 170

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + L+   +   K++ M + +  + A+S+ +L + +R                      
Sbjct: 171 SIAGLKQSKALLDKEIAMTRPIVREGAMSEVELLRMQR---------------------Q 209

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             EL  + + +   YL E   +L + +   A     +       E+  I +P+ G +   
Sbjct: 210 SAELQLQMDEKQNKYLTEAGAELVKTEAELAQAKENMAGRADPVERSRIRAPLRGIVKNI 269

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +        Q +M+I+P      I A + P+ + +V+ G  A V+   Y        
Sbjct: 270 RVNTLGGVVSAGQDIMEIIPLEDQLLIEAYINPRDVAYVRTGMPALVKLTAYDYAIYGGL 329

Query: 364 KAIIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAEVL 414
             ++  + P   +             + YY V++  ++   +D N   + +  G  A V 
Sbjct: 330 DGVVILVSPDTLRDQKRPGDLKLDPNEAYYRVLVTTSNNYLTDRNGKILPVIPGMIASVD 389

Query: 415 FTAKNTTLAQEIIHPIT 431
                 ++ Q +I PIT
Sbjct: 390 IKTGQKSVFQYLIKPIT 406


>gi|317492535|ref|ZP_07950963.1| HlyD family type I secretion membrane fusion protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919527|gb|EFV40858.1| HlyD family type I secretion membrane fusion protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 389

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 74/432 (17%), Positives = 145/432 (33%), Gaps = 64/432 (14%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +++ R        +  +++ G++G   W+    ++     +G++        I+S   
Sbjct: 6   MQEDMARQS-RFYSSVVWITLAGMVGFFIWAYFATLDEVTVGTGKVTTSIRAQLIESLDG 64

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLN 121
           GI+    V  G  + +G  L   +               + LR     + +E +      
Sbjct: 65  GIVSALLVHEGDIVKKGQILARLDPKRFQSNYGEAAARARALRASSERLRSELTGEPLKF 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           +   + E A  +RE QL +                                     R +L
Sbjct: 125 SASTLAEPALVARERQLYE-----------------------------------SRRRNL 149

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
               + L+        +L M + L  K A SQ ++ + +R       EL+  I + +N  
Sbjct: 150 NETVANLQESYRLVVAELRMTQPLVAKGAASQVEVIRLQRQAS----ELQGKIDDARN-- 203

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                           Y      +  +N      ++  +   E   ++ T++SP+ G + 
Sbjct: 204 ---------------QYALRAREEQVKNNADLDAQLEVMAGKEDQLDRVTMISPVRGIVK 248

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             Q  +     Q    LM+IVP      I  ++ P+ I +++ G  ATV+   Y      
Sbjct: 249 DIQVMTVGGVLQPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKITAYDSSIYG 308

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAK 418
                +E + P   Q +   + Q YY V ++      S+       +  G  A V     
Sbjct: 309 NLNGTVEIVSPDTLQDEV-RRDQYYYRVYVRTQSAELSNKAGRKFPILPGMVASVEIKTG 367

Query: 419 NTTLAQEIIHPI 430
             T+   +I P+
Sbjct: 368 QKTVLDYLIKPL 379


>gi|212709223|ref|ZP_03317351.1| hypothetical protein PROVALCAL_00258 [Providencia alcalifaciens DSM
           30120]
 gi|212688135|gb|EEB47663.1| hypothetical protein PROVALCAL_00258 [Providencia alcalifaciens DSM
           30120]
          Length = 411

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 66/439 (15%), Positives = 144/439 (32%), Gaps = 64/439 (14%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
            H +   +K+     L    +   + +   I W+    +E  +   G I+       I+S
Sbjct: 19  SHDLASVMKKERSNLLFLPIIFLALLLTIFIIWAYNSNLEEIIRGQGTIIPSSREQVIQS 78

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G I++  V+ G  + +G  LL  +D  +  L+   +  ++NL               
Sbjct: 79  IDPGNIQEMYVKEGDIVEKGQILLKLDDARSRALLRESQARVQNLEA------------- 125

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                               +       S+      S +     +   R  +    +   
Sbjct: 126 --------------------ISARLKGESRNEEPDFSKIADQELVARER-NAYNAKKTQR 164

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +   + LR       +++ + K L ++  VS  ++ + ER                    
Sbjct: 165 DQAIAGLRQSKGLLDREIAITKPLAKEGLVSNVEILRMERQSV----------------- 207

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
               EL  + N    NYL E + +L + +         +++ E    +  I +P+ G + 
Sbjct: 208 ----ELATQINERMNNYLAEANAELIKVESELDQAEESMSMREDPVARSEIRAPVHGIVK 263

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +  +        Q +++I+P      + A + P+ +  ++ G    V+   Y      
Sbjct: 264 NIKINTIGGVVNTGQDILEIIPLDDKLMVEAYIRPQDVAFLRPGMPVVVKVTAYDYAIYG 323

Query: 362 KFKAIIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAE 412
               +++ I P     D           + +Y ++++       D N   +E+  G  A 
Sbjct: 324 GLNGVVKLISPDTLSNDTRRSELKLNPDETFYRILVETESNYLLDKNNQKMEIIPGMVAS 383

Query: 413 VLFTAKNTTLAQEIIHPIT 431
           V       ++   +I PIT
Sbjct: 384 VDIKTGEKSVFDYLIKPIT 402


>gi|331006807|ref|ZP_08330070.1| secretion protein, HlyD family [gamma proteobacterium IMCC1989]
 gi|330419387|gb|EGG93790.1| secretion protein, HlyD family [gamma proteobacterium IMCC1989]
          Length = 453

 Score =  276 bits (705), Expect = 6e-72,   Method: Composition-based stats.
 Identities = 65/429 (15%), Positives = 148/429 (34%), Gaps = 15/429 (3%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
               +    P   +++  + ++ I+ +I W+ L  ++      G+++    V  +++   
Sbjct: 28  AASAILYQTPRGGQQLLWVIVVFIVVMIVWASLAYVDEFTRGEGQVIPSQYVQIVQNLEG 87

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ +  V+ G  + +G PLL  +D   +  +   +V+   L       K+         
Sbjct: 88  GIVNEVFVKEGQAVERGQPLLRLDDKRFSFSLRESEVNQSQLLSQSLRLKAEAVGEPFPE 147

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D L          L     K  +    ++      +  S ++ + ++        + + K
Sbjct: 148 DEL----------LALVPEKIVAAEKALYFARAQELNTSNQVIVQQVVQKRQELSEWQAK 197

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              L+   +  + +L +   L  + AVSQ ++ +  R +     E++        +   +
Sbjct: 198 FQRLKRSYNLLKDELDLTAPLVAQGAVSQVEVLRLRRELNDVQGEMKAAQLAIPRINSSL 257

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E   +     + +      +  + +            +    ++  ++SP+ GTI    
Sbjct: 258 SESEQKLAAAESAFRSRSQAEYNEVKAELNRLNESSQAIADQVDRTLVVSPVTGTIKQLF 317

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +     Q  + L+ IVP      + A+V+P  I  +     A V+F  Y         
Sbjct: 318 VKTLGGVIQPGRDLVAIVPTEDKLRVEARVSPADIAFLHPQQKAVVKFTAYDFSVHGGLT 377

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTL 422
             +  I P     +       +Y V ++     L    N   +  G    V       T+
Sbjct: 378 GEVINISPDTITDEE---GNSFYVVQIETEQSFLGSEVNPKPIIAGMTVSVDILTGQKTV 434

Query: 423 AQEIIHPIT 431
              I+ PI 
Sbjct: 435 LDYILKPIL 443


>gi|227113344|ref|ZP_03827000.1| putative type I secretion protein [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 389

 Score =  276 bits (705), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 75/422 (17%), Positives = 148/422 (35%), Gaps = 63/422 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +  +  LS++G+I    W+    ++     SG++        I+S   GII +  V+ 
Sbjct: 15  RRVSAIIWLSLLGLIAFFIWATFAVLDEVSVGSGKVTPSTRAQVIESLDGGIIGQIYVQQ 74

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAF 131
           G+ + +G  L   +      +       ++ LR     +  E S      ++  + E A 
Sbjct: 75  GNVVEKGQVLAQLDINRFQSVYGEAFSRVQTLRASAERLHAELSGAPLTFSEETLKEPAL 134

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +RE QL +   +                                         + L+  
Sbjct: 135 AARERQLYESRLRNRDET-----------------------------------VANLQQS 159

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   +++L M + L ++ A S  ++ +  R                   +  I    DEA
Sbjct: 160 MRLVEQELRMTEPLVQRGAASAVEVIRLRRQ------------------ISEIRGKIDEA 201

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           N ++A   +E   +  +N      +M  ++      ++ TI SP+ G +   Q  +    
Sbjct: 202 NNQYAVRARE---EQVKNNADLEAQMEVVSGKADQLKRATITSPVRGIVKDIQVTTVGGV 258

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q    LM+IVP      I  ++ P+ I +++ G  ATV+   Y           +E + 
Sbjct: 259 LQPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKITAYDASIYGNLTGEVESVS 318

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           P   Q +   + Q YY V ++ T       +     +  G  A V       ++   +I 
Sbjct: 319 PDTLQDEV-RRDQFYYRVYVRTTQAELTNNAGEKFPIVPGMVASVEIKTGQKSVMDYLIK 377

Query: 429 PI 430
           P+
Sbjct: 378 PL 379


>gi|262373032|ref|ZP_06066311.1| membrane spanning export protein [Acinetobacter junii SH205]
 gi|262313057|gb|EEY94142.1| membrane spanning export protein [Acinetobacter junii SH205]
          Length = 395

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 73/436 (16%), Positives = 147/436 (33%), Gaps = 61/436 (13%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K         +  +  IG+   +TW+ L  +E   + +G+++       I+S   GI+ K
Sbjct: 16  KEPALPRSSLVIWIVCIGLAIFLTWAWLFNLEEVSTGTGKVIPSSKEQTIQSLEGGILTK 75

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF--LNNKYDVL 127
             V+ G  + +G  L   +       +   K  + + +      ++ ++   L    +VL
Sbjct: 76  LNVQEGDIVQKGEILAQLDQTRFASNVGESKSLLTSAQATAARLRAEVNGTPLAFPAEVL 135

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           ++    +EE  L                                   Y  R +LE   + 
Sbjct: 136 KEPKLVKEETAL----------------------------------YYSRRENLEQSLAG 161

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +  L   Q++L M + L  K A S+ ++ + +R                       N+L
Sbjct: 162 YQQALQLVQQELMMTEPLVAKGAASEVEVLRLKREA---------------------NDL 200

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            ++ N     Y  +   +L +       +   +     + ++    +P+ G I      +
Sbjct: 201 RNKMNDTRNQYYVKAREELSKANTDIETQQQVVMGRSDSLQRAIFKAPVRGVIKEIDVTT 260

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                 Q+  LM IVP      I A+++P+ I  ++ G  A V+   Y           +
Sbjct: 261 LGGVIPQNGKLMTIVPLEDKLLIEARISPRDIAFIRPGQEALVKITAYDYSIYGGLTGKV 320

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQ 424
             I P   + +   Q Q YY V ++         + +   +  G  A V       T+  
Sbjct: 321 TVISPDTIRDEV-KQDQFYYRVYIRTDSDKLFNKAGHAFGITPGMVATVDIRTGEKTVMN 379

Query: 425 EIIHPITDNWPKIFER 440
            ++ P       + ER
Sbjct: 380 YLLKPFNKAKEALRER 395


>gi|282600354|ref|ZP_05973978.2| protein secretion ABC efflux system, membrane fusion protein
           [Providencia rustigianii DSM 4541]
 gi|282565648|gb|EFB71183.1| protein secretion ABC efflux system, membrane fusion protein
           [Providencia rustigianii DSM 4541]
          Length = 421

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 67/439 (15%), Positives = 144/439 (32%), Gaps = 64/439 (14%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
            H +   +K+     L    +   + +   I W+    +E  +   G I+       I+S
Sbjct: 29  SHDLASVMKKERSNLLFLPIIFLALLLTIFIVWAYNSNLEEIIRGQGTIIPSSREQVIQS 88

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G I++  V+ G  + +G  LL  +D  +  ++   +  ++NL               
Sbjct: 89  IDPGNIQEMYVKEGDIVDKGQILLKLDDARSMAILRESQARVQNLDA------------- 135

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                                 + H               + L  + T   +    + D 
Sbjct: 136 -------------------ISARLHGESHNEAPDFSKIADQELVERETNAYNAKKTQRD- 175

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
               S LR   +   +++++ K L ++  VS  ++ + ER                    
Sbjct: 176 -QAISGLRQSKALLDREISITKPLAKEGLVSNVEILRMERQSV----------------- 217

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
               EL  + N    +YL E + +L + +         + + E    +  I +P+ G + 
Sbjct: 218 ----ELSTQINERMNSYLAEANAELVKVESELDQAEENMLMREDPVTRSEIRAPVHGIVK 273

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +  +        Q +++I+P      + A + P+ +  ++ G    V+   Y      
Sbjct: 274 NIKINTLGGVVNTGQDILEIIPLDDKLMVEAYIRPQDVAFLRPGMPVVVKVTAYDYAIYG 333

Query: 362 KFKAIIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAE 412
               +++ I P     D           + +Y +I++       D N   +E+  G  A 
Sbjct: 334 GLNGVVKLISPDTLSNDTRRSELKLNPDETFYRIIVETDTNYLLDKNNHKMEIIPGMVAS 393

Query: 413 VLFTAKNTTLAQEIIHPIT 431
           V       ++   +I PIT
Sbjct: 394 VDIKTGEKSVFDYLIKPIT 412


>gi|260598999|ref|YP_003211570.1| hypothetical protein CTU_32070 [Cronobacter turicensis z3032]
 gi|260218176|emb|CBA33024.1| hypothetical protein CTU_32070 [Cronobacter turicensis z3032]
          Length = 389

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 71/432 (16%), Positives = 143/432 (33%), Gaps = 64/432 (14%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M + L R        +  L++  ++    W+    ++     +G+I        I+S   
Sbjct: 6   MQEELARQG-RFYSSVIWLTLAALVLFFVWAWFATLDEVTVGTGKITPSSRAQVIESLDG 64

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLN 121
           GI+    V  G  + +G  L   +               + LR     + +E +      
Sbjct: 65  GIVNALMVHEGDVVERGQMLARLDPTRFQSNYGEAAARARALRASSERLRSELTGEPLQF 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++  + E A  +RE QL +                                     R +L
Sbjct: 125 SEESLRESALVARERQLYE-----------------------------------SRRRNL 149

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +     L+   +    +L M + L  K A S+ ++ + +R       EL+  + + +N  
Sbjct: 150 DETLENLQKTYNLVMAELRMTQPLVAKGAASEVEVIRLQRQ----AAELKGKMDDARN-- 203

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                           +      +  +N      ++  +       ++ T+ SP+ G + 
Sbjct: 204 ---------------QFAVRAREEQVKNNADLDAQLQAMAGKADQLDRATLFSPVRGVVK 248

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             Q  +     Q    LM+IVP      +  ++ P+ I +++ G  ATV+   Y      
Sbjct: 249 DIQVTTVGGVLQPGGKLMEIVPLEDQLLVETRINPRDIAYIRPGLPATVKITAYDSSIYG 308

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAK 418
             K  +E + P   Q +   + Q YY V ++       + N     +  G  A V     
Sbjct: 309 DLKGEVEMVSPDTLQDEV-KRDQFYYRVYVRTQSAELKNRNGKRFPILPGMVANVEIKTG 367

Query: 419 NTTLAQEIIHPI 430
             T+   +I P+
Sbjct: 368 QKTVLDYLIKPL 379


>gi|163851092|ref|YP_001639135.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium extorquens PA1]
 gi|163662697|gb|ABY30064.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium extorquens PA1]
          Length = 448

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 59/410 (14%), Positives = 142/410 (34%), Gaps = 17/410 (4%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    +  ++ +SG +  +     ++    G++ +  V +G  +     LL  +D +T 
Sbjct: 48  WAATTDLSGAILASGSVAVDQRAKSVQHRDGGVVGEILVRDGQPVTASQVLLRIDDAQTR 107

Query: 94  DLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             + +   + V +   +  +  E+     ++    +L +  E         +        
Sbjct: 108 AELAIVKGQLVELAAKKARLLAERDGQREVSFPQALLHQGAE---------VQSILEGEL 158

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++F   ++      +    ++  I      L  +    R  L+    +   +  L EK  
Sbjct: 159 RLFRGNLAGRDSQRQQLELQIGQIAEEIAGLTKQRDAKRDELAVLTTEHGKLSILVEKQL 218

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              +      R  ++   E               +E+  +          E  R+L Q  
Sbjct: 219 YESSRFLPITRDKHRLAGEQGSLEASIARAKTRTSEIRVQILAIADTARTEAQRELSQVD 278

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A+  ++   L+    +  I +P+ G +   ++F+       +  L  +VP      I
Sbjct: 279 AKAAELSNRRVALDDRLTRTEIRAPVTGILHELKTFTVGGVVTPADILATVVPEDARLKI 338

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
             ++ P  I  +  G  A VRF  ++     + K ++  + P  ++   +   + +Y   
Sbjct: 339 EIRIPPTSIDQIGVGRAARVRFTAFSQRTTPELKGVLTYVSPSTTKGPRD---EAFYIGH 395

Query: 391 LKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           +++ D  +     +  L  G P EV       T    ++ P+ D + + F
Sbjct: 396 VELKDGEIERLGGSARLIPGMPVEVQVATDERTAMSYLMKPLQDQFSRAF 445


>gi|169796515|ref|YP_001714308.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter baumannii AYE]
 gi|184157552|ref|YP_001845891.1| membrane-fusion protein [Acinetobacter baumannii ACICU]
 gi|213156372|ref|YP_002318792.1| membrane spanning export protein [Acinetobacter baumannii AB0057]
 gi|215483978|ref|YP_002326203.1| Leukotoxin secretion protein D [Acinetobacter baumannii AB307-0294]
 gi|239503722|ref|ZP_04663032.1| Leukotoxin secretion protein D [Acinetobacter baumannii AB900]
 gi|260555578|ref|ZP_05827799.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter baumannii ATCC 19606]
 gi|301347262|ref|ZP_07228003.1| Leukotoxin secretion protein D [Acinetobacter baumannii AB056]
 gi|301594405|ref|ZP_07239413.1| Leukotoxin secretion protein D [Acinetobacter baumannii AB059]
 gi|332853953|ref|ZP_08435073.1| type I secretion membrane fusion protein, HlyD family
           [Acinetobacter baumannii 6013150]
 gi|332870209|ref|ZP_08439104.1| type I secretion membrane fusion protein, HlyD family
           [Acinetobacter baumannii 6013113]
 gi|332874286|ref|ZP_08442205.1| type I secretion membrane fusion protein, HlyD family
           [Acinetobacter baumannii 6014059]
 gi|88758834|emb|CAJ77851.1| putative RND family drug transporter [Acinetobacter baumannii AYE]
 gi|169149442|emb|CAM87328.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           (superfamily ABC, membrane) [Acinetobacter baumannii
           AYE]
 gi|183209146|gb|ACC56544.1| Membrane-fusion protein [Acinetobacter baumannii ACICU]
 gi|193076938|gb|ABO11671.2| putative RND family drug transporter [Acinetobacter baumannii ATCC
           17978]
 gi|213055532|gb|ACJ40434.1| membrane spanning export protein [Acinetobacter baumannii AB0057]
 gi|213988210|gb|ACJ58509.1| Leukotoxin secretion protein D [Acinetobacter baumannii AB307-0294]
 gi|260412120|gb|EEX05417.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter baumannii ATCC 19606]
 gi|322507866|gb|ADX03320.1| putative protein secretion efflux system, membrane fusion protein
           [Acinetobacter baumannii 1656-2]
 gi|323517463|gb|ADX91844.1| membrane-fusion protein [Acinetobacter baumannii TCDC-AB0715]
 gi|332728309|gb|EGJ59690.1| type I secretion membrane fusion protein, HlyD family
           [Acinetobacter baumannii 6013150]
 gi|332732376|gb|EGJ63633.1| type I secretion membrane fusion protein, HlyD family
           [Acinetobacter baumannii 6013113]
 gi|332737511|gb|EGJ68419.1| type I secretion membrane fusion protein, HlyD family
           [Acinetobacter baumannii 6014059]
          Length = 396

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 142/428 (33%), Gaps = 57/428 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               +  +  IG++    W+    +E   + +G+++       I+S   GI+ K  V+ G
Sbjct: 23  RASLVIWIVGIGLVIFFIWAWFFKLEEVSTGTGKVIPSSKEQVIQSLEGGILTKLNVQEG 82

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L   +       +   +  +   +      ++ +    N   ++     +++
Sbjct: 83  DIVQKGQILAQLDPTRFASNVGESRSLLIAAQATAARLRAEV----NGTPLVFPEIVAQD 138

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L+      + +                             R DLE   S LR  L   
Sbjct: 139 PKLVHEETALYESR----------------------------RADLEQTLSGLRQALQLV 170

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q++L M + L  K A S+ ++ +  R                       N+L ++ N   
Sbjct: 171 QQELAMTEPLVAKGAASEVEVLRLRREA---------------------NDLQNKMNDAR 209

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y  +   +L +       +   +     + ++    +P+ G +      +      Q+
Sbjct: 210 NQYYVKAREELSKANTDTQTQQQVVMGRNDSLQRAVFKAPVRGVVKEITVTTHGGVIPQN 269

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM IVP  +   I A++ P+ I  ++ G  A V+   Y        K  +  I P   
Sbjct: 270 GKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGLKGKVTVISPDTI 329

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           + +   Q Q YY V ++       +       +  G  A V       T+   ++ P   
Sbjct: 330 RDEV-KQDQFYYRVYIRTDSDKLYNKEGKAFGITPGMVATVDIRTGEKTVLDYLLKPFNK 388

Query: 433 NWPKIFER 440
               + ER
Sbjct: 389 AKEALRER 396


>gi|254510955|ref|ZP_05123022.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
 gi|221534666|gb|EEE37654.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
          Length = 423

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 62/410 (15%), Positives = 145/410 (35%), Gaps = 9/410 (2%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           TWS++  I  ++ +SG I  + N   ++ P  G++    V+ G  + +G  L+  +  E 
Sbjct: 19  TWSVVANISGAIIASGRIEVDQNRQVVQHPDGGVVAAILVKEGDLVREGQTLIRLDPSEL 78

Query: 93  TDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              + + +  +         ++ E+     +     +L++A ++ +      +    +  
Sbjct: 79  QTELAITESQLFETLARHGRLEAERDGQSTIEFDQLLLDRAAQNPD------VADLIAGQ 132

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            ++F    +S    +     R   I      +  + + +R  L     +L   + L +K 
Sbjct: 133 QRLFMARGASTKNEIAQLEKRKGQIGNQVEGVVAQQAAIRRQLELIVLELGDQQQLLDKG 192

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
               + +   +R       ++      +      I E+  E         +    +L   
Sbjct: 193 LAQVSRVLALQREEAGLLGQMGNLDGMKAQAEGQITEIGIEILKLDTTRRENAISELRDL 252

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +    +   +   L     +  I SP++G +   Q F+  +  + + P+  I+P  +   
Sbjct: 253 RVRELELREQRIALMNQLSRLDIKSPVSGVVHGLQVFALQSVIRPADPVTFIIPQDRPLV 312

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I A+V    +  +      T+RF         +    +  I       +N  Q+    ++
Sbjct: 313 INARVEAVHVDKLNLDQDVTLRFSALDQRETPELLGKVVTISADAFDDENTQQSFYRVDI 372

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           ILK  ++        L  G P E      + +    ++ P+ D + K F 
Sbjct: 373 ILKNGEIDRLPEGTVLIPGMPVEAFIKTADRSPIVFLVKPLADYFTKAFR 422


>gi|56551151|ref|YP_161990.1| HlyD family type I secretion membrane fusion protein [Zymomonas
           mobilis subsp. mobilis ZM4]
 gi|56542725|gb|AAV88879.1| type I secretion membrane fusion protein, HlyD family [Zymomonas
           mobilis subsp. mobilis ZM4]
          Length = 393

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 69/426 (16%), Positives = 148/426 (34%), Gaps = 57/426 (13%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            R+  + ++ ++    W+    +E   + +G+++   +   I+S   GI+ +  V+ G  
Sbjct: 22  ARIVWVVVVMLLCFFIWAACFTLEEVSTGTGKVVPSSHEQTIQSLEGGILVRLNVKEGDI 81

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L   +   T   ++                ++ ++     +    KA+ +  + 
Sbjct: 82  VQAGQMLAQLDRTRTQSSVEETAARAVAAEATAARLRAEVNNTPISFPDSVKAYPALVKS 141

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D                   +YRS              R  L    S L   L+  + 
Sbjct: 142 ETD-------------------LYRSR-------------RNSLAMGLSDLHQQLALIKN 169

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +LTM + L  + A S  ++ + +R                      ++E+   A+     
Sbjct: 170 ELTMTEPLVARGAASDVEVLRLKR---------------------QVSEIDTRADDMQNQ 208

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           Y+ +   DLE+ +     + S         ++ T  SP+ G +   +  +       +  
Sbjct: 209 YMVKAREDLEKAEAEAKAQQSVTKGRSDMLDRLTFTSPVRGIVKDIEVTTKGGVIPPNGR 268

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP  +   + A+++P+ I  +  G  ATV+   Y         A +  I P   Q 
Sbjct: 269 LMTIVPLDEQLLVEARISPRDIAFIHPGQRATVKLTAYDYAIYGGLPAKVTVISPDTVQD 328

Query: 378 DNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
           D   +   YY V ++      ++       +  G  A +     + T+ + ++ P+    
Sbjct: 329 DV-RKDSYYYRVWVRTDSDHLTNKSGHKFPIVPGMVATIDIHTGSKTVLEYLVKPLNRAK 387

Query: 435 PKIFER 440
             + ER
Sbjct: 388 EALRER 393


>gi|237729539|ref|ZP_04560020.1| HlyD family secretion protein [Citrobacter sp. 30_2]
 gi|226908145|gb|EEH94063.1| HlyD family secretion protein [Citrobacter sp. 30_2]
          Length = 396

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 65/434 (14%), Positives = 141/434 (32%), Gaps = 62/434 (14%)

Query: 8   NLKRNHP-ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +++R H  +   R+ LLS +    L  W+    ++   + SG+++       ++S   GI
Sbjct: 14  DIRREHRFSGASRIILLSTLLFAVLGIWAYFGKLDEVSTGSGKVIPSSREQVLQSLDGGI 73

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V  G ++     +   +   +   +                  ++   LN + + 
Sbjct: 74  LAELTVREGDKVQANQIVARLDPTRSESNVGESA-------ARYRASLASSARLNAEVND 126

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L   F        D +                          +  R     R  L +  +
Sbjct: 127 LPLVFPDSLRAWPDLIA-------------------------SETRLYKSRRAQLADSMA 161

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L+  L S  K+L + + L +  A S  ++ + +R      L++ +   +          
Sbjct: 162 ELQDALVSVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ---------- 211

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                      Y  +    L +         + L   E +  + T+ +P+ G +   Q  
Sbjct: 212 -----------YFVQAREALSKANAEVDMLAAILKGREDSVTRLTVRAPMRGIVKNIQVT 260

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +  +M+IVP      I  +++P+ I  +  G  A V+   Y        + +
Sbjct: 261 TIGGVIPPNGEMMEIVPLDDHLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLEGV 320

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLA 423
           +E I P   Q     +   YY V ++       +    +  +  G  A V       T+ 
Sbjct: 321 VETISPDTIQDKVKPEI-FYYRVFIRTHQDFLQNKLGRHFSIVPGMIATVDIKTGEKTIV 379

Query: 424 QEIIHPITDNWPKI 437
             +I P    + + 
Sbjct: 380 DYLIKP----FNRA 389


>gi|254513084|ref|ZP_05125150.1| type I secretion membrane fusion protein, HlyD [Rhodobacteraceae
           bacterium KLH11]
 gi|221533083|gb|EEE36078.1| type I secretion membrane fusion protein, HlyD [Rhodobacteraceae
           bacterium KLH11]
          Length = 436

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 72/443 (16%), Positives = 167/443 (37%), Gaps = 13/443 (2%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEI 59
           M     +   R        ++  +I G+ G +  W+ L  I  +V + G I+   +   I
Sbjct: 1   MTSEEMRQFLRRSVRKHVLISYFAIFGLFGSVFAWAYLTKISGAVIAPGTIVVLGHNKSI 60

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSA 116
           + P  G++K+  V++G  + +   LL  +       ++L + S   L   R  I  E   
Sbjct: 61  QHPDGGVVKEIFVKDGDIVQENDLLLRLDATALHANVELARNSYLELIAERARIVAELEG 120

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            D +    +++       ++   D +        ++    +++  R +    ++   +  
Sbjct: 121 QDRILFPKELI-------QQFHSDDVQDIIRQNRELLIARMAARDRQVAQLESQYSQVSA 173

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           N   L  ++   +       + ++ M+ LFEK  V  + +   +R  Y+++  L+    E
Sbjct: 174 NLSGLRAQAVARQQENDIVGERVSDMQVLFEKELVPSSTIAAAKRDEYRTSGLLQATYSE 233

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +   + EL  +      +   ++   L + +         +   EK   +  I +P 
Sbjct: 234 IQRVEMQLIELRLQIESVEKDAHADMIARLSEMRLEIVQARINMEHAEKQVSRVAIRAPT 293

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G I      +     Q ++P+++I+P      +  KV P  I+ V    T +++FP   
Sbjct: 294 RGVIHDMSVHTIGGVIQPAEPVLEILPIDDDLILELKVRPVDIKKVFPHQTVSIQFPGLN 353

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
               ++  A ++ +   + Q    +  Q+YY     +     +   + L  G PA     
Sbjct: 354 ARTVQRVDARLDYVSRDLLQD--PIDGQQYYTARAHLIKKKQALEKVNLVAGMPAIAFIQ 411

Query: 417 AKNTTLAQEIIHPITDNWPKIFE 439
            +  T+   ++ P+ +      +
Sbjct: 412 TRERTVLDYLVEPLKNQIALALK 434


>gi|322832021|ref|YP_004212048.1| type I secretion membrane fusion protein, HlyD family [Rahnella sp.
           Y9602]
 gi|321167222|gb|ADW72921.1| type I secretion membrane fusion protein, HlyD family [Rahnella sp.
           Y9602]
          Length = 389

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 69/436 (15%), Positives = 135/436 (30%), Gaps = 63/436 (14%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M H    +        +  +   ++  ++    W+    ++     +G++       +I 
Sbjct: 1   MAHLTLHDELEAESRKVSWIIWGTLASLLVFFVWARFAVLDEVTVGTGKVTPSSKAQQID 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSAL 117
           S   G+I K  V+ GS + +G  L   +   +          ++ LR     +  E +  
Sbjct: 61  SLDGGVILKLMVQEGSVVNRGQLLAQLDPTRSQSNYGEAASRVRTLRASSERLSAELTGA 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
               +   +      +RE QL     +                                 
Sbjct: 121 PLKFSPETMKSPELVARERQLYLSRKQNRDET---------------------------- 152

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
                   + L+  L     ++ M + L  K A  Q ++ + +R       ELR  I + 
Sbjct: 153 -------VTNLQQSLRLVNDEINMTQPLVAKGAAGQVEVIRLKRQAS----ELRGKIDDA 201

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            N                  Y      +  +N      E+  L   E    +  + SP+ 
Sbjct: 202 TN-----------------QYAVRAREEQVKNNADLDAELQVLAGKEDQVTRSELYSPVH 244

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q  +     Q    LM+IVP      I  ++ P+ I +++ G  ATV+   Y  
Sbjct: 245 GIVKDIQVSTVGGVLQPGGKLMEIVPIEDQLLIETRINPRDIAYIRPGLPATVKISAYDS 304

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL---AFSDNNIELRNGFPAEVL 414
                    +E + P   Q +   + Q YY V ++         +     +  G  A V 
Sbjct: 305 SIYGDLDGKVEGVSPDTLQDEV-KRDQYYYRVYVRTDKAFLTNKAGRQFPIVPGMVANVD 363

Query: 415 FTAKNTTLAQEIIHPI 430
                 ++   +I P+
Sbjct: 364 IKTGQKSVLDYLIKPL 379


>gi|254294998|ref|YP_003061021.1| type I secretion membrane fusion protein, HlyD family [Hirschia
           baltica ATCC 49814]
 gi|254043529|gb|ACT60324.1| type I secretion membrane fusion protein, HlyD family [Hirschia
           baltica ATCC 49814]
          Length = 445

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 64/427 (14%), Positives = 149/427 (34%), Gaps = 16/427 (3%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           +P  ++    L    I+  + WS    I     +SGE++ +     ++    GII K  V
Sbjct: 31  NPYIVRTTLALVSSLILAFLVWSSFTNINEVARTSGEVIPQGKKQLVQHLEGGIIDKIHV 90

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           E G  +  G  L++       +   +       L+   +  ++ ++     +        
Sbjct: 91  EEGDLVEAGQLLVSISAKAINEDHRILVAKQVFLQLQAERLRAFIEKREPDFSG------ 144

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
                  D     +S     F     S  + L++   ++   +     L ++ +     L
Sbjct: 145 ------FDLSALKYSDQQASFESMKVSREQELQIVSRQLEQKHELERGLLSQKASETEKL 198

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              Q+     K+L EK       L ++E  + K    +    ++ +   + +NE      
Sbjct: 199 KISQQIYDNRKSLAEKGLFPAVRLMEEELKLTKLKDSVAALNNKLRLARQEMNEYESRIA 258

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              A    ++   L       +   + +  L +  ++  I++P++G +      +     
Sbjct: 259 GLQATQSDQVLERLNITVSEISQNENAVDKLNERIQRLNIVAPVSGRVKGMSVNTVGEVL 318

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              + +M+IVP  +   +  K++PK I ++++G    V+F  +   R       ++ I  
Sbjct: 319 TAGETVMEIVPQDRTLEVHVKISPKDIGYLRRGQPVRVKFSAFDFSRFGAVNGKLDYISA 378

Query: 373 IISQQDNNLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               + N      +Y+  + +      +D   ++  G            T+ Q ++ PI 
Sbjct: 379 ATFTEPN---GGRFYKGTILLDKSFVGADTRNQILPGMTVMADVVTGEKTILQYLLKPIH 435

Query: 432 DNWPKIF 438
            +    F
Sbjct: 436 VSLKTAF 442


>gi|254463448|ref|ZP_05076864.1| type I secretion membrane fusion protein, HlyD [Rhodobacterales
           bacterium HTCC2083]
 gi|206680037|gb|EDZ44524.1| type I secretion membrane fusion protein, HlyD [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 396

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 66/430 (15%), Positives = 160/430 (37%), Gaps = 61/430 (14%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
             M  L    +   I W+    ++  V + G  ++      I++   GI+ +  V+ G +
Sbjct: 21  SLMIWLCAGTVWLFIVWAAFAWVDEIVRADGSFISSSRPQIIQNLEGGILAELLVKEGDE 80

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +++   L      +    +D     I      R  ++ E +                   
Sbjct: 81  VMKDDVLARLHGTQFQSSVDDLAEQITGFEVRRLRLEAELAG------------------ 122

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                    ++  T         + +  S K  L   +S +++R D        +++L+ 
Sbjct: 123 ---------QFDFTIPSNLAMQAAGMVASEKALLRARQSDFVSRRD------GAQSVLNQ 167

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             K+L +M+ + ++  VS  ++ +  +    + ++               +E+  +  LE
Sbjct: 168 AAKELDLMEKMLKREIVSLIEVTRARKAHADAKIKF--------------DEVVTQTELE 213

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A    ++ ++L       A     +        +  ++SP+ G +      +     + 
Sbjct: 214 RAQEYSDVLKEL-------ATLKQNMKASTDQLNRTVLISPMRGVVNNLSVTTIGGVVRP 266

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + +++I+P  +  ++ A+V P+ I ++++G  AT++   Y        KA +  I    
Sbjct: 267 GEEILQIIPLDEELFVEARVKPENIANIRRGQEATIKLSAYDYTIYGTLKARVGFISADT 326

Query: 375 --SQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              ++  +     +Y+V LK+   + +D    +E+R G  A V       T+ Q ++ P+
Sbjct: 327 FKDERSRSPDGDPHYKVTLKVDMNSLTDRQTGVEIRPGMQASVELHTGQKTVLQYMLKPL 386

Query: 431 TDNWPKIFER 440
             +   + ER
Sbjct: 387 YKSKEALRER 396


>gi|260753200|ref|YP_003226093.1| type I secretion membrane fusion protein, HlyD family [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
 gi|258552563|gb|ACV75509.1| type I secretion membrane fusion protein, HlyD family [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
          Length = 393

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 68/426 (15%), Positives = 148/426 (34%), Gaps = 57/426 (13%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            R+  + ++ ++    W+    +E   + +G+++   +   I+S   GI+ +  V+ G  
Sbjct: 22  ARIVWVVVVMLLCFFIWAACFTLEEVSTGTGKVVPSSHEQTIQSLEGGILVRLNVKEGDI 81

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L   +   T   ++                ++ ++     +    +A+ +  + 
Sbjct: 82  VQAGQMLAQLDRTRTQSSVEETAARAVAAEATAARLRAEVNNTPISFPDSVRAYPALVKS 141

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D                   +YRS              R  L    S L   L+  + 
Sbjct: 142 ETD-------------------LYRSR-------------RNSLAMGLSDLHQQLALIKN 169

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +LTM + L  + A S  ++ + +R                      ++E+   A+     
Sbjct: 170 ELTMTEPLVARGAASDVEVLRLKR---------------------QVSEIDTRADDMQNQ 208

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           Y+ +   DLE+ +     + S         ++ T  SP+ G +   +  +       +  
Sbjct: 209 YMVKAREDLEKAEAEAKAQQSVTKGRSDMLDRLTFTSPVRGIVKDIEVTTKGGVIPPNGR 268

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP  +   + A+++P+ I  +  G  ATV+   Y         A +  I P   Q 
Sbjct: 269 LMTIVPLDEQLLVEARISPRDIAFIHPGQRATVKLTAYDYAIYGGLPAKVTVISPDTVQD 328

Query: 378 DNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
           D   +   YY V ++      ++       +  G  A +     + T+ + ++ P+    
Sbjct: 329 DV-RKDSYYYRVWVRTDSDHLTNKSGHKFPIVPGMVATIDIHTGSKTVLEYLVKPLNRAK 387

Query: 435 PKIFER 440
             + ER
Sbjct: 388 EALRER 393


>gi|118593549|ref|ZP_01550928.1| putative protein secretion protein, HlyD family membrane fusion
           protein, secretes ExpE1 [Stappia aggregata IAM 12614]
 gi|118433888|gb|EAV40547.1| putative protein secretion protein, HlyD family membrane fusion
           protein, secretes ExpE1 [Stappia aggregata IAM 12614]
          Length = 436

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 62/429 (14%), Positives = 158/429 (36%), Gaps = 14/429 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             L    L   IG  G + W     ++ +  ++G+++ +     I     GI+++  V+ 
Sbjct: 16  KPLMAAVLTVSIGFGGFLLWGFTADLDSAAVATGKVIVDSKRKTISHLEGGILRRLLVQE 75

Query: 75  GSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           G  +  G PL+  +D         ++ K+VS+      +  E+   + +    ++   + 
Sbjct: 76  GDFVDAGQPLVELDDTRARAELAQLNGKRVSLLARLARLRAERDLAEEIVFPEEI-RSSD 134

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E    +++           +V+   I+   + ++  + ++ +         ++  LL   
Sbjct: 135 EPLIAEVVAAEKGVFEKRRQVYEGKIALQQKEIEQYVAQIEANQAQIEATGHRRQLL--- 191

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               ++ ++ +  L +K   S+  L++ +  + +   +  E   ++    +         
Sbjct: 192 ----EERVSALSGLEKKGFTSKAMLSEVQLELSEMIGDGGEFAAQKARAEKARQGAEVAL 247

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 +  +I+ ++ + Q        ++   +   ++  + SP AGT+   +  +    
Sbjct: 248 LQAEQEWQSDIAGEILEAQLELNVTNEQIISSKDVLDRLVVHSPQAGTVSNIEMRTPGGV 307

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +  + +M IVP  +   +  ++    I  V+ G  A +R   Y           +  + 
Sbjct: 308 VEPGKAIMDIVPRDEKMLVEVRMNLNDIDSVRVGSEARIRLTAYDRQTTSPLGGEVTYVA 367

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNN-IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
               Q  +      YY V  ++          + L  G PAEVL   +     + ++ PI
Sbjct: 368 AD--QTVDPQTQAAYYIVRAQVLSGELEGKPALSLYPGMPAEVLIVRRARKAMEYLLEPI 425

Query: 431 TDNWPKIFE 439
           T++  + F 
Sbjct: 426 TESLDRAFR 434


>gi|218550773|ref|YP_002384564.1| HlyD family secretion type I protein [Escherichia fergusonii ATCC
           35469]
 gi|218358314|emb|CAQ90961.1| HlyD family secretion type I protein [Escherichia fergusonii ATCC
           35469]
 gi|325499059|gb|EGC96918.1| HlyD family secretion type I protein [Escherichia fergusonii
           ECD227]
          Length = 396

 Score =  274 bits (700), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 63/444 (14%), Positives = 142/444 (31%), Gaps = 64/444 (14%)

Query: 2   HHFMWKNL---KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE 58
           H    ++L   +    +   R+  L  +    L  W+    ++   + +G+++       
Sbjct: 6   HDIAMEDLDIRREREFSGASRIIFLCTLLFAILGVWAWFGKVDEVSTGNGKVIPSSREQI 65

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           ++S   GI+ +  V  G ++     +   +   +   +     S    R  + +      
Sbjct: 66  LQSLDGGILAELTVREGDRVEANQVVARLDPTRSQSNVGE---SAAKYRASLASSARLTA 122

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +N+       +  +  E +      Y S                              R
Sbjct: 123 EVNDLPLTFPASLNNWPELIASETRLYKS-----------------------------RR 153

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             L +  + LR  L S  K+L + + L +  A S  ++ + +R      L++ +      
Sbjct: 154 AQLADTEAELREALVSVNKELQITQRLQKSGAASHVEVLRLQRQKSDLGLKITDL----- 208

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                            A Y  +    L +         + +   E +  + T+ SP+ G
Sbjct: 209 ----------------RAQYYVQAREALSKANAEVEMLSAIIKGREDSVTRLTVRSPMRG 252

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   +  +       +  +M+IVP      I  +++P+ I  +  G  A V+   +   
Sbjct: 253 IVKNIKVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAWDYA 312

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLF 415
                + ++E I P   Q +   +   YY V ++       +    +  +  G  A V  
Sbjct: 313 IYGGLEGVVETISPDTIQDEVKPEI-FYYRVFIRTHQDYLQNKSGRHFSIVPGMIATVDI 371

Query: 416 TAKNTTLAQEIIHPITDNWPKIFE 439
                T+   +I P    + +  E
Sbjct: 372 KTGEKTIVDYLIKP----FNRARE 391


>gi|324111831|gb|EGC05811.1| HlyD type I secretion membrane fusion protein [Escherichia
           fergusonii B253]
          Length = 396

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 64/444 (14%), Positives = 143/444 (32%), Gaps = 64/444 (14%)

Query: 2   HHFMWKNL---KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE 58
           H    ++L   +    +   R+  L  +    L  W+    ++   + +G+++       
Sbjct: 6   HDIAMEDLDIRREREFSGASRIIFLCTLLFAILGVWAWFGKVDEVSTGNGKVIPSSREQI 65

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           ++S   GI+ +  V  G ++     +  F+   +   +     S    R  + +      
Sbjct: 66  LQSLDGGILAELTVREGDRVEANQVVARFDPTRSQSNVGE---SAAKYRASLASSARLTA 122

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +N+       +  +  E +      Y S                              R
Sbjct: 123 EVNDLPLTFPASLNNWPELIASETRLYKS-----------------------------RR 153

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             L +  + LR  L S  K+L + + L +  A S  ++ + +R      L++ +      
Sbjct: 154 AQLADTEAELREALVSVNKELQITQRLQKSGAASHVEVLRLQRQKSDLGLKITDL----- 208

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                            A Y  +    L +         + +   E +  + T+ SP+ G
Sbjct: 209 ----------------RAQYYVQAREALSKANAEVEMLSAIIKGREDSVTRLTVRSPMRG 252

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   +  +       +  +M+IVP      I  +++P+ I  +  G  A V+   +   
Sbjct: 253 IVKNIKVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAWDYA 312

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLF 415
                + ++E I P   Q +   +   YY V ++       +    +  +  G  A V  
Sbjct: 313 IYGGLEGVVETISPDTIQDEVKPEI-FYYRVFIRTHQDYLQNKSGRHFSIVPGMIATVDI 371

Query: 416 TAKNTTLAQEIIHPITDNWPKIFE 439
                T+   +I P    + +  E
Sbjct: 372 KTGEKTIVDYLIKP----FNRARE 391


>gi|254469445|ref|ZP_05082850.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
 gi|211961280|gb|EEA96475.1| type I secretion membrane fusion protein, HlyD [Pseudovibrio sp.
           JE062]
          Length = 435

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 60/429 (13%), Positives = 159/429 (37%), Gaps = 15/429 (3%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            +  +L+   P +  R+ L+  + +I  I W+    +E      G ++    +  +++P 
Sbjct: 9   DIRASLQTRPPRAATRVILIVFVALIAGIVWASQAELEEVTRGEGRVVPSSQIQIVQAPE 68

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI+K   VE G  + +G  ++  +D   +  +   +    +L      E+   +  N  
Sbjct: 69  KGIVKSLLVEEGQIVQKGDIVVRVDDTGFSSQLGELQQRQWSLLAR--AERLMAEANNAP 126

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++ E        +L +    +     +V+      +   + +   +         +L  
Sbjct: 127 LELSE--------ELRNNAPGHSFEEEQVYLARKQQLASEISLLKNQRLQREQELEELLA 178

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +         +  +++ + + LF++  + + +  + +R + ++   L       + +   
Sbjct: 179 EQRKTTVTTETLAREVEINERLFKRKVLPEIEFLRLKRQLDEAQGSLEVLNASIRRVTSA 238

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E  +        +  +  ++L   +   A     +       ++  + +P+ G +   
Sbjct: 239 GQEAEERIANAQTVFHAKARQELAAARAELAVINESIKAARDKVQRTDLEAPVYGVVNQL 298

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +     Q  +PL++IVP      I A+++P+ +  ++ G   TV+   Y        
Sbjct: 299 NISTIGAVVQPGEPLVEIVPLEDTLLIEAQISPQDVAFLRPGQEVTVKITAYDYSIYGGL 358

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTT 421
           K  +E+I    ++ +   Q   +++V ++     L    + + +  G  A V       T
Sbjct: 359 KGKLERIAADSTKDE---QGNRFFKVNVRTDKNYLGTETDPLPIIPGMVASVDVLTGFKT 415

Query: 422 LAQEIIHPI 430
           +   I+ PI
Sbjct: 416 VLDYILKPI 424


>gi|27382782|ref|NP_774311.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110]
 gi|27355955|dbj|BAC52936.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110]
          Length = 453

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 67/438 (15%), Positives = 146/438 (33%), Gaps = 13/438 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
            +  + +    +    +L ++   G   W+  +P+  +V + G I        ++    G
Sbjct: 23  TEQPRSDMRRIIAWGCVLLVLQFCGFGLWATTVPLRGAVVAPGFIKVHSKRKAVQHLEGG 82

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALDFLNN 122
           IIK   V     +  G  +   +  +    +   +    +   +   +  E+ A   +  
Sbjct: 83  IIKSIYVRENDHVEAGQLIARLDTAQIEATLGSLETKFFADLAMEARLAAEQDAAKSIRF 142

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             ++ E A        +        T    F   ++++    K+   +M         LE
Sbjct: 143 PDELRESATRLSARIAI-------QTQEAEFAARLAAIENERKVIDQQMLQNADAIRGLE 195

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           + +  L   L   ++++     L  K    +  +   +R   ++  ++  N      M  
Sbjct: 196 SNTQGLEQQLKLLREEIADTSYLLAKGLARKPRVLALQRAEAEAAGQVDRNAASISEMQG 255

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I+EL D       N  ++I++          D   ++  L     +  + +P +G IV 
Sbjct: 256 KISELQDRRRQLGFNQNQDIAKQRHATSEEIGDLRHRIAALRAQLVRSELRAPESGRIVG 315

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
             S   +      + L++IVP      I A + P   + V  G    VR       R   
Sbjct: 316 LNSRDLNAVLGPRETLLEIVPTQDRLVIEATLKPADREEVYVGQMTRVRVHALNVRRRPM 375

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI-ELRNGFPAEVLFTAKNTT 421
            +  +  +             +  Y   +++   A + + I  L  G P E+       T
Sbjct: 376 LEGRVVGVAADALTDTR--SGESSYLAEVELDPNAPTASYISTLMPGMPVEIFVETGERT 433

Query: 422 LAQEIIHPITDNWPKIFE 439
            A+ ++ P+T    + F 
Sbjct: 434 FAEYLLQPMTLRINRAFR 451


>gi|227327234|ref|ZP_03831258.1| putative type I secretion protein [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 389

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 74/422 (17%), Positives = 147/422 (34%), Gaps = 63/422 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +  +  LS++G+I    W+    ++     SG++        I+S   GII +  V+ 
Sbjct: 15  RRVSVIIWLSLLGLIVFFIWATFAVLDEVSVGSGKVTPSTRAQVIESLDGGIIGQIYVQQ 74

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAF 131
           G+ + +G  L   +      +       ++ LR     +  E S      +   + E A 
Sbjct: 75  GNVVEKGQVLAQLDINRFQSVYGEAFSRVQTLRASAERLHAELSGAPLKFSAETMKEPAL 134

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +RE QL +   +                                         + L+  
Sbjct: 135 AARERQLYESRLRNRDET-----------------------------------VANLQQS 159

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   +++L M + L ++ A S  ++ +  R                   +  I    DEA
Sbjct: 160 MRLVEQELRMTEPLVQRGAASAVEVIRLRRQ------------------ISEIRGKIDEA 201

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           N ++A   +E   +  +N      +M  ++      ++ TI SP+ G +   Q  +    
Sbjct: 202 NNQYAVRARE---EQVKNNADLEAQMEVVSGKADQLKRATITSPVRGIVKDIQVTTVGGV 258

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q    LM+IVP      I  ++ P+ I +++ G  ATV+   Y           +E + 
Sbjct: 259 LQPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKITAYDSSIYGNLTGEVESVS 318

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           P   Q +   + Q YY + ++ T       +     +  G  A V       ++   +I 
Sbjct: 319 PDTLQDEV-RRDQFYYRIYVRTTQAELTNKAGEKFPIVPGMVASVEIKTGQKSVMDYLIK 377

Query: 429 PI 430
           P+
Sbjct: 378 PL 379


>gi|294011752|ref|YP_003545212.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292675082|dbj|BAI96600.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 460

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 68/432 (15%), Positives = 154/432 (35%), Gaps = 16/432 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++  T+++++  +  + W+    ++ +  + G +        ++    G++    V+ G 
Sbjct: 34  MRAGTIVAVLFFVLFLGWAAFARLDAAAYAPGRLTVAGQRQSVQHRDGGVVGAIFVKEGQ 93

Query: 77  QILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            + QG PL+   D E      +   + + +K  R  +  E+S    +    +     F++
Sbjct: 94  HVGQGQPLMELADAEVRAQARMYGAQYIELKAQRARLIAEQSGASHVEWPAE-----FDA 148

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            E Q  D   +        F+   S +     +   +   +        ++ +       
Sbjct: 149 LEGQEQDDAREAIRLQQTQFDARSSVLAAQTGVLREQANQVQQTTRGYRSQLAASSEQAR 208

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++L  ++ + EK  VS++ +   ER       +  +             E   +A  
Sbjct: 209 LIGEELESLRGVAEKGFVSKSRIRALERARADLHGQEGQFSASIARSGAEAGENRLKALE 268

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               Y +  + +L   + +  + + K    +    +  I +P AGTIV    F+      
Sbjct: 269 AEKAYRERAASELRDVEFSLNEVLPKYRAAKDQLARLQIRAPAAGTIVGLNVFTVGGVIA 328

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q LM IVP      I A+++P+ I  +K G  A ++F    +         I ++   
Sbjct: 329 AGQKLMDIVPDRAGLVIEARISPEDIDDLKVGQRAQIKFSSLHERDLPIMDGRISRLSAD 388

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSD------NNIELRNGFPAEVLFTAKNTTLAQEII 427
             Q +       +Y   + +     +        +  L+ G P ++L   +  T  Q  +
Sbjct: 389 SFQDEKT--GMSFYTAEMIVPPRELARIRDVRGEDFSLKAGMPVQLLVPLRRRTALQYAL 446

Query: 428 HPITDNWPKIFE 439
            P+T +    F 
Sbjct: 447 EPLTQSLWLSFR 458


>gi|254451671|ref|ZP_05065108.1| type I secretion membrane fusion protein, HlyD [Octadecabacter
           antarcticus 238]
 gi|198266077|gb|EDY90347.1| type I secretion membrane fusion protein, HlyD [Octadecabacter
           antarcticus 238]
          Length = 389

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 69/421 (16%), Positives = 153/421 (36%), Gaps = 59/421 (14%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
             +  L    +   + W+    I+  V + G I++      I++   GI+ +  V  G +
Sbjct: 16  SLLIWLIGATVFIFLLWAKFAAIDEIVRAKGSIVSSSRPQIIQNLEGGILAELLVSEGDE 75

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +  G  L      +    +D  +  +      R  ++ E + +   N    +   + E  
Sbjct: 76  VEPGDVLARLRSTQFETSVDDLREQVIAAEIRRLRLEAEIAGMFSFNVPDAIAAYSPE-- 133

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                                    +  S +  L   +S Y+ R +        +++++ 
Sbjct: 134 -------------------------MVASERALLNARQSDYVGRTN------GAQSIVTE 162

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q++L +M++LFE+   +  ++++  +                 + L H NE+  +A L+
Sbjct: 163 TQRELAVMEDLFEREIAALIEVSRARK--------------SNSDALNHYNEIITQAELD 208

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A+   ++   L       A     L + E    +  I SP+ G +      +     + 
Sbjct: 209 RASEYSDVLSAL-------ASLRQDLCVAEDRLTRTMITSPMRGIVNNLGVTTIGGVIRP 261

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + + +I+P     ++ A+V+P  I +V  G  AT++   Y          +++ I    
Sbjct: 262 GEEIFQIIPLDDELFVEAEVSPSNIANVIPGQAATIKLSAYDYTIYGSLTGVVQLISADT 321

Query: 375 SQQDNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            +   +     +Y V   +  T+L      IE+R G  A+V     + T+ Q    P+  
Sbjct: 322 FEDGRDPNAPPHYRVTLRVNTTNLGERQAQIEIRPGMQADVELHTGSKTVLQYPTKPLYR 381

Query: 433 N 433
           +
Sbjct: 382 S 382


>gi|332703897|ref|ZP_08423985.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio africanus str. Walvis Bay]
 gi|332554046|gb|EGJ51090.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio africanus str. Walvis Bay]
          Length = 431

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 59/409 (14%), Positives = 142/409 (34%), Gaps = 20/409 (4%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ +  ++I  ++ GEI+    V  ++    GI+++  V  G+ + QG P++  E   + 
Sbjct: 34  WAAVAQLDIVSTAGGEIVPRGKVKAVQHLEGGIVREILVAEGATVEQGQPIVVLESTTSD 93

Query: 94  DLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             ++  +V +  LR     ++ E   L                 ++ L        +   
Sbjct: 94  SGVEELQVRMNALRVDMARLEAEVQGLAAPQF------------DQGLSTLCPDLVAQAR 141

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +F   ++ +         R++    +  + + K   LR  L    + +++ + L + N 
Sbjct: 142 DMFATRMTRLASEAASLDDRIKQRVQDVAESQAKLRSLRQNLELSNEQVSLSEELLKDNL 201

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            ++ +     +   K    + E           +++  ++A      + +E    L+   
Sbjct: 202 TTRYEHLSYLKEQNKLASAVEEEQAALSRAESALSQAREDARRLRHAFQEEAQGKLKDAS 261

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +   ++  +  + E+ T+ SP+ GT+      +          +  IVP      +
Sbjct: 262 GELDELNQRMRRVADSLERTTLRSPVRGTVKALHVTTVGGVVTPGMAVADIVPVGGQLLV 321

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            AK+    I +V +G T  ++       R    +  +  + P      +    + +Y V 
Sbjct: 322 EAKLPVSDIGYVHEGQTTVIKLASMDARRFGSLRGKVITVSPDSFFSQD---GRAFYSVQ 378

Query: 391 LKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           ++     F  +     L  G            T+ Q +  P  D+    
Sbjct: 379 IETEKDCFEGSGGRYTLYPGMQVMAYIHTGQRTVLQYLFDPFLDSLSSA 427


>gi|304393446|ref|ZP_07375374.1| putative alkaline protease secretion protein AprE [Ahrensia sp.
           R2A130]
 gi|303294453|gb|EFL88825.1| putative alkaline protease secretion protein AprE [Ahrensia sp.
           R2A130]
          Length = 472

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 68/440 (15%), Positives = 160/440 (36%), Gaps = 8/440 (1%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           W+        S+ R  L+ + G +G  + W+   PI  +V +SG+I++      I+ P  
Sbjct: 34  WRKQVPTANGSIVRKGLIFVFGFLGLFVIWAFAFPIASAVVASGKIVSSGQNKLIQHPTG 93

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLN 121
           G+++   V++GSQ+ +G  LL  +D         +  +   +  L+  ++ E S   F  
Sbjct: 94  GVVRSISVQDGSQVAKGDVLLVLDDSANRAEFTRLTARHQRLTALKTRLEAENSGGTF-Q 152

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              D       ++            +   + F  G   +   L   +    +     + L
Sbjct: 153 QPADTGLALRGTQAASPSGEETAIFNEQRREFEAGRKRLNAELDAAVALAEAQKEQLVGL 212

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + + +  R LL+    +++ ++ L     ++++ L + ER   +   ++ +   +  + +
Sbjct: 213 QTRIAASRQLLAQTDLEISRLRPLANAGDIAKSRLWEVERRRLEQARDVGDLDSQIASTM 272

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           + I E          +  +  S +L        +   +L       E   + SP+ GT+ 
Sbjct: 273 QRIAEGEARVEQLAESDNETRSEELTGVLGELREISDQLNAARSAVELTELRSPVDGTVT 332

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              + +        + + +IVP         +V P  +  V  G  A +    +     +
Sbjct: 333 ALIANTIGGVVPAGELVAQIVPTGSELEAEFRVAPTDVNSVNVGQKARIVVTAFNRRTYE 392

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILK-ITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +  +  +      Q +    + Y+      + D+  +    +++ G   EV       
Sbjct: 393 PVEGEVTYVSADS--QTDASTGETYFLARASLLQDVEKNQGIAQIQPGMQTEVYALKTPR 450

Query: 421 TLAQEIIHPITDNWPKIFER 440
                 + P+ D++ K F +
Sbjct: 451 NFVTYAVQPVLDSFSKAFRQ 470


>gi|168262132|ref|ZP_02684105.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|205349232|gb|EDZ35863.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
          Length = 396

 Score =  273 bits (697), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 61/432 (14%), Positives = 134/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  +    W+    ++   + +G+++       ++S   GI+ 
Sbjct: 16  QRERAFSGAGRIVLICSLLFLIFGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  + + L 
Sbjct: 76  QLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVNDLP 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 129 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLSDTEAEL 163

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+L + + L +  A S  ++ + +R      L++ +   +            
Sbjct: 164 RDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 211

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + T+ SP+ G +   Q  + 
Sbjct: 212 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTI 262

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 263 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 322

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 323 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 381

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 382 LIKP----FNRA 389


>gi|146312763|ref|YP_001177837.1| HlyD family type I secretion membrane fusion protein [Enterobacter
           sp. 638]
 gi|145319639|gb|ABP61786.1| type I secretion membrane fusion protein, HlyD family [Enterobacter
           sp. 638]
          Length = 399

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 64/426 (15%), Positives = 140/426 (32%), Gaps = 61/426 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +  + + + S++  I +  W+    ++   + +G+++       ++S   GI+ +  V  
Sbjct: 25  SGARSIVIFSLLLFIVVGVWAWYGILDEVSTGTGKVIPSSREQVLQSLDGGILAELTVHE 84

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G Q+  G  L   +   +   +                  ++   L  +   L   F + 
Sbjct: 85  GDQVQAGQVLARLDPTRSESNVGESA-------ARYRASLASSVRLTAEVSDLPLVFPAS 137

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            ++  D +                          T  R     R  LE+    L+A LS 
Sbjct: 138 LQKWPDLIA-------------------------TETRLYTSRRAQLEDTQRELKAALSL 172

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             K+L + + L +  A S+ +  + +R      L+L +   +                  
Sbjct: 173 ANKELDITQRLIKTGAASRVEALRLQRQKSDLELKLTDVRSQ------------------ 214

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              Y  +    L +         + L   E +  + T+ SP+ G +   +  +       
Sbjct: 215 ---YYVQAREALSKANAEVDMVSAVLKGREDSVTRLTVRSPVRGIVKNIKVTTIGGVIPP 271

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           +  LM+IVP      I  +++P+ I  +     A V+   Y        + ++E I P  
Sbjct: 272 NGELMEIVPVDDHLLIETRLSPRDIAFIHPAQKALVKVTAYDYAIYGGLQGVVETISPDT 331

Query: 375 SQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            Q +   +   YY V ++         +  +  +  G  A V       ++   +I P  
Sbjct: 332 IQDEAKPEV-FYYRVFIRTNQDYLVNKAGRHFSIVPGMIATVDIKTGEKSVMDYMIKP-- 388

Query: 432 DNWPKI 437
             + + 
Sbjct: 389 --FNRA 392


>gi|300311130|ref|YP_003775222.1| Type I antifreeze protein:HlyD family secretion protein
           [Herbaspirillum seropedicae SmR1]
 gi|300073915|gb|ADJ63314.1| Type I antifreeze protein:HlyD family secretion protein
           [Herbaspirillum seropedicae SmR1]
          Length = 457

 Score =  273 bits (697), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 60/402 (14%), Positives = 140/402 (34%), Gaps = 17/402 (4%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WS+  PI++ V  SG I+  ++   I+    GI+    V  G+ + +G  L++  D+   
Sbjct: 58  WSVFAPIDMVVRGSGRIVASEHNQVIQHLEGGIVSAILVREGAAVKKGQTLISISDVRAN 117

Query: 94  DLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             +   +V I  LR     +  E S    L    D+       + EQ             
Sbjct: 118 ADLGEGRVKILGLRAKIARLSAEASGASSLQMPDDLERGDPAVQSEQAA----------- 166

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             F    S + + + +   +         +  ++     + L   Q+   ++ ++  +NA
Sbjct: 167 --FAARSSKLMQEMSVLREQSAQRQAELGEAISRQKSQASELELAQRQYKLIHDMLVRNA 224

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            SQ +  Q    V  +  +L         +   I E   +     + +  +   +L   +
Sbjct: 225 ASQLEDIQAASRVQDAQSKLAATNAMIPRLNAAIAEAQAKQGEAASRFRSDARTELTAAE 284

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A    ++        +  + +P+ G +      +     +   P++++ P      I
Sbjct: 285 TELARLQEEIKSRNDRVSRSEVKAPMDGVVNRVMINTIGGVVRPGDPIIEMTPSDDKLVI 344

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A+++P     +  G  A V+   Y          ++ +I       + + + + +Y + 
Sbjct: 345 EARISPTDRAELVTGARARVKVSAYDYGVYGAMDGVVTEISADTVPDEGSPRGERFYRLK 404

Query: 391 LKITD-LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           +++          + L  G  A         T+ Q ++ P++
Sbjct: 405 IEVKRGHDELQQKLALMPGMTASADIIVGRRTVWQYLMSPLS 446


>gi|29421544|gb|AAO73516.1| RsaE [Caulobacter vibrioides]
          Length = 419

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 56/429 (13%), Positives = 157/429 (36%), Gaps = 14/429 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     +    N  +  +    +  +  +G++ W+   P++ +V ++G +  + N   I+
Sbjct: 1   MKPPKIQRPTDNFQSVARIGYGIIALAFVGVLGWAAFAPLDTAVIANGVVTTDAN-KTIQ 59

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSAL 117
               G++ K  V  G ++  G  L   +  +      + +      + L   +  E+   
Sbjct: 60  HLEGGMLAKILVREGERVRPGRCLFQLDPTQVNAAAGITRAQYVAFRALEARLVAERDQR 119

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             ++   ++L +  +         + +  +     F     ++   + +   +       
Sbjct: 120 PTISFPAELLAQRADP-------VVARALADEQSQFVERRQTIQGQVDLFNAQRDQFKSE 172

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              ++ ++  L+  L   Q++L  ++ +++K  V +  L   ER     +  + +   ++
Sbjct: 173 IDGIDRQAQGLKEQLGFIQEELGDLRKIYDKGLVPRPRLLALEREQASLSGAIGKLNADR 232

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              ++ + E   +       + +++S  + + +   A+   +  +    + +  I+SP+ 
Sbjct: 233 SKAIQGMGETQLKIRQIRQQFFEQVSEAIAETRVKLAEVSEREVVAADAQRRVNIVSPVN 292

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G     + F+     + ++ L+ I P  +   I A+  P  + ++ +G    VR P +  
Sbjct: 293 GVAQALRFFTEGAVVRPAEALVDIAPDERSFEIHAQFAPTDVDNIHEGMVTEVRLPSFHS 352

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFT 416
                    I  I     +  +      Y+  ++ +       N    +  G PA+V+  
Sbjct: 353 REVPILNGKIISISHD--RLTDPEGKVSYFLGVVTVDIKQLPPNLRTRVTAGMPAQVIVP 410

Query: 417 AKNTTLAQE 425
               T+ Q 
Sbjct: 411 TGERTVLQY 419


>gi|83949566|ref|ZP_00958299.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Roseovarius nubinhibens ISM]
 gi|83837465|gb|EAP76761.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Roseovarius nubinhibens ISM]
          Length = 395

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 62/432 (14%), Positives = 155/432 (35%), Gaps = 62/432 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
                   L    +   I W+    ++  V + G  ++      I++   GI+ + +V+ 
Sbjct: 17  RGASLTIWLCAATVFLFIVWAGFAWLDEIVRAEGAFISSSRPQIIQNLEGGILSELRVQE 76

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAF 131
           G  + QG  L      +    ++     +      R  ++ E +                
Sbjct: 77  GDVVAQGDVLARLHGTQFRSSVEDLSDQVAAHEIRRLRLEAELAG--------------- 121

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                       ++  T  +        +  S +  L   ++ Y+ R +         A+
Sbjct: 122 ------------QFDFTVPEDLATRSPDIVASERSLLQARQADYVKRSEGAG------AV 163

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L   ++++ +++ L +K  V+  ++ +  +                       +E+  + 
Sbjct: 164 LKQAREEMDLLERLLKKKVVALIEVTRARKSHAD--------------AKTRYDEIVTQT 209

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            L+ A    +  ++L   ++  A  +          ++ T++SP+ G +      +    
Sbjct: 210 ELDRAQEYSDTLKELATLRQNLAASL-------DQLDRTTLVSPMRGIVNDLNITTIGGV 262

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +  + ++ I P  +  ++ A+V P+ I ++++G  AT++   Y        K  ++ I 
Sbjct: 263 VRPGEQILSITPLDEELFVEARVAPEDIGNIREGQEATIKLTAYDYTIYGTLKGEVDFIS 322

Query: 372 PIISQQDN--NLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEII 427
               + +N  +     +Y+V LK+   A +     IE+R G  +EV       T+ Q ++
Sbjct: 323 SDTFKDENARDPNGDPHYKVTLKVDMTALTPRQQAIEIRPGMLSEVELHTGGKTVLQYLL 382

Query: 428 HPITDNWPKIFE 439
            P+  +  + F 
Sbjct: 383 KPLYKS-KEAFR 393


>gi|89052925|ref|YP_508376.1| Type I secretion membrane fusion protein, HlyD [Jannaschia sp.
           CCS1]
 gi|88862474|gb|ABD53351.1| Type I secretion membrane fusion protein HlyD [Jannaschia sp. CCS1]
          Length = 435

 Score =  272 bits (696), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 67/413 (16%), Positives = 157/413 (38%), Gaps = 12/413 (2%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
              WS+   +  +V +SG+I  + N   I+ P  G++ +  V+ G ++ +   L+  +  
Sbjct: 29  FGGWSVSSTLSGAVVASGQIEVDRNRQAIQHPDGGVVAELLVDEGDRVGEAQVLVRLDTS 88

Query: 91  ETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E+   + + +  +      R  +  E+  LD L    D++  A  + E      + +  +
Sbjct: 89  ESETELAVARARLAETAARRVRLQAERDGLDRLTFSEDLVAFAAGNPE------IAEVVA 142

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +F     S+ R  +    R+  I      +  +   L   ++  + +L   ++L E
Sbjct: 143 GQRNLFAARADSLAREEEQLRGRITQIGTQVDAMRAQEEALVEQITLVEDELVRREDLLE 202

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           + + +   + +  + + +   +L +    +      I E             ++   +L 
Sbjct: 203 RGSGTVEPVVRLRQELVQLRGQLGQATAGRAEAAERIIETELAILQLTTTQREQAISELR 262

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + + T  + + +   LE+   +  + +P+AGTI     F +    + + P   IVP  + 
Sbjct: 263 ELRVTEQELVERTANLERRIARLELRAPVAGTIHGLTIFGARAVLRPADPFAYIVPEGRP 322

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             I A+V    I  V +G T ++ FP +      +    + ++       +  +    +Y
Sbjct: 323 LVISARVPAIDIDQVFEGQTVSLTFPAFDQSSMPEVTGEVAQVSADAFVDE--VSGSSFY 380

Query: 388 EVILKITDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
              + +T+          L  G P E     ++ T    ++ P T  + + F 
Sbjct: 381 RAEITMTEEQAQLLGARVLIPGMPVEAFIRTEDRTPLAYLLEPFTTYFSRAFR 433


>gi|197251864|ref|YP_002147627.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197215567|gb|ACH52964.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
          Length = 396

 Score =  272 bits (696), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 135/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 16  QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  +   L 
Sbjct: 76  QLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVSDLP 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 129 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 163

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+LT+ + L +  A S  ++ + +R      L++ +   +            
Sbjct: 164 RDALASVNKELTITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 211

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + T+ SP+ G +   Q  + 
Sbjct: 212 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTI 262

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 263 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 322

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 323 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 381

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 382 LIKP----FNRA 389


>gi|198245008|ref|YP_002216700.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|197939524|gb|ACH76857.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|326624455|gb|EGE30800.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Dublin str. 3246]
          Length = 396

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 135/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 16  QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  + + L 
Sbjct: 76  QLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVNDLP 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 129 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 163

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+L + + L +  A S  ++ + +R      L++ +   +            
Sbjct: 164 RDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 211

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + TI SP+ G +   Q  + 
Sbjct: 212 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTIRSPVRGIVKNIQVTTI 262

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 263 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 322

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 323 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 381

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 382 LIKP----FNRA 389


>gi|212634231|ref|YP_002310756.1| putative alkaline protease secretion protein [Shewanella
           piezotolerans WP3]
 gi|212555715|gb|ACJ28169.1| Probable alkaline protease secretion protein [Shewanella
           piezotolerans WP3]
          Length = 439

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 70/431 (16%), Positives = 155/431 (35%), Gaps = 4/431 (0%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N    +     + +    G + W+ L  I+ +  + G+++ E    +++    G +K+  
Sbjct: 8   NTRRVIVFGLSIIVFAFGGFVIWASLTKIDAAAIAPGKLVAESQRKKVQHLHGGQVKQIF 67

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
              G  + QG  L+   D++         +     +  ID     L  +           
Sbjct: 68  AFEGQHVEQGQTLIELSDVQVEADYQRILLKTVRAQAQIDRLTPLLAGVGADLLNQPSLV 127

Query: 132 ESR---EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            S    E Q  D + +       ++    S  +  ++    +   +  +    +++    
Sbjct: 128 FSPFVLEHQQRDEVAQIIIMQQLMYERQTSDFHLFVQQYAFQKNQLTHSLKGTQSRLKAT 187

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L   ++++ M  +L +   VS++     +R        L +   E   +   + EL 
Sbjct: 188 QKQLDLVKEEVQMNASLLDDGFVSKSRHLAIQRSESGVEGLLAQLRAEVDVIAARLGELN 247

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                E +N     ++ L++ ++   + + +L+     R+   I +  +GT+V     S 
Sbjct: 248 QSHEAERSNRQLHWAQQLQEQRQLRDEGLHRLSAQIDKRQHINIAAEHSGTVVAMAIHSI 307

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  Q LM++VP +    + A V P+ I  V  G    VR   Y           + 
Sbjct: 308 GAVISPGQILMELVPETDEMIVEAYVRPEDIDVVHAGLLTQVRLTAYDSRDAIPMTGEVI 367

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +           Q +  Y V +K+     + +NI+L  G  A+V    +  TL + ++ 
Sbjct: 368 HVSADRFFASAAGQPEG-YLVKVKLNPTNSNHSNIKLHAGMSADVFIVLQPRTLLEYLLS 426

Query: 429 PITDNWPKIFE 439
           P+  ++   F 
Sbjct: 427 PLGSSFELAFR 437


>gi|119505003|ref|ZP_01627080.1| HlyD family secretion protein [marine gamma proteobacterium
           HTCC2080]
 gi|119459289|gb|EAW40387.1| HlyD family secretion protein [marine gamma proteobacterium
           HTCC2080]
          Length = 455

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 83/432 (19%), Positives = 162/432 (37%), Gaps = 14/432 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L  +   + +    + ++   G   W+ L PIE +V   G +  E N   ++    GI
Sbjct: 29  AELLDSDRRARRFGYAVILVVFGGFGAWAGLAPIESAVHGVGTVQVEGNRKVVQHLEGGI 88

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V NG  + +G  LL  ++ +    + +        R  +D   +  D      D 
Sbjct: 89  VTEILVSNGDFVTKGQALLRMDETQVKAELSIISGRFWAKRALVDRLLAERD------DK 142

Query: 127 LEKAFESREEQLLDFLGKYH-STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            + AF    ++L D            +FN   + +    ++   R+  +       E   
Sbjct: 143 KDIAFTPWLKKLGDERVLVAIGNEKALFNARRTDLAGEKELFEQRIAQLRDQVKGFEAVL 202

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  R++ +S   + T ++ L E+  V +  + + ER       E+ + +         I 
Sbjct: 203 TAKRSVAASLGSEATELEELLEEGYVDKQRIRELERSQASILGEVSDQVARISAAKIAIE 262

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E+  +       +   +   L Q Q    D   +   +     +  + +P AGTI+  +S
Sbjct: 263 EMRLQILQLGKGFQTRVVNALTQEQEILFDLEQQYHAVSARAARMVVRAPNAGTILALES 322

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +        Q +M IVP +    I  K++P  I  +  G  A VRF  + D        
Sbjct: 323 NTIGEVFGPGQQIMAIVPDTDSLLIDTKLSPMDIDRISIGQEAEVRFSVFKDAY--SITG 380

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           ++ K+       ++N     Y++  +++   D+A    N +L  G PAEVL      TL 
Sbjct: 381 VLVKLSADSLLDESN--GAPYFQGKVRLLEGDIALLGAN-KLVPGMPAEVLVKTGERTLL 437

Query: 424 QEIIHPITDNWP 435
             +  P+   + 
Sbjct: 438 GYLSSPLHRMFE 449


>gi|254487853|ref|ZP_05101058.1| type I secretion membrane fusion protein, HlyD [Roseobacter sp.
           GAI101]
 gi|214044722|gb|EEB85360.1| type I secretion membrane fusion protein, HlyD [Roseobacter sp.
           GAI101]
          Length = 396

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 64/429 (14%), Positives = 152/429 (35%), Gaps = 62/429 (14%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
             +  L    ++  + W+    ++  V + G +++      I++   GI+ +  V  G  
Sbjct: 21  SMVVWLCAASVLVFLLWAAFAWVDEIVRADGSMISSSRPQIIQNLEGGILAELAVGEGDI 80

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           + +G  L      +    +D  +  I      R  ++ E +    L    +         
Sbjct: 81  VEKGDVLARLHATQFQSSVDELQDQISAFEIRRLRLEAEIAGRSDLVVPDE--------- 131

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                             F      +  S +  L   ++ +++R +   +       L+ 
Sbjct: 132 ------------------FAQRTPGIVDSERGLLKARQADFVSRSEGAQRV------LTQ 167

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             K+  +++N+ EK  VS  ++ +  +I   + ++L              +E+    +LE
Sbjct: 168 AAKERELLENMHEKKIVSLIEVTRARKIHADARIKL--------------DEITTSTDLE 213

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A    ++ ++L       A     L        +  ++SP+ G +      +     + 
Sbjct: 214 RAQEYSDVLKEL-------ATLKQTLKSSTDQLNRTVLVSPLRGIVNTLSVTTIGGVVRP 266

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + +++I+P  +  ++ A+V P+ I  V+ G  ATV+   Y        K  +  I    
Sbjct: 267 GEEILQIIPLDEELFVEARVKPENIAGVRPGQEATVKLSAYDYTIYGTLKGTVTLISADT 326

Query: 375 --SQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
               +        +Y+V L++     +     + +R G  A V     + T+ Q ++ P+
Sbjct: 327 FKDDRSRAPDGDPHYKVTLQVDTAHLTPRQASLRIRPGMQASVELHTGSKTILQYLLKPL 386

Query: 431 TDNWPKIFE 439
             +  + F 
Sbjct: 387 YKS-KEAFR 394


>gi|323494908|ref|ZP_08100000.1| ABC transporter: Membrane fusion protein [Vibrio brasiliensis LMG
           20546]
 gi|323310872|gb|EGA64044.1| ABC transporter: Membrane fusion protein [Vibrio brasiliensis LMG
           20546]
          Length = 431

 Score =  272 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 71/439 (16%), Positives = 158/439 (35%), Gaps = 16/439 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H +      ++    L   T    + +I  + WS++  ++    + G ++ E     ++S
Sbjct: 4   HEYGELVESKSTTKLLAIATWAVALCVIIFVVWSLMTQVDEIAKAKGTVIPEGERQILQS 63

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G +K+  V+ G  +  G  L+ F+       +D  K     L   I+   + LD   
Sbjct: 64  EIGGKLKRVLVKEGDLVEAGQALVEFDATFQRTTLDELKSQQVTLVLSIERMNALLDQRE 123

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
             + +    + S             S      +   +  Y+   +       I      +
Sbjct: 124 PDFSLYSIEYPS-----------LVSEQQSQLSAQKALYYQQRVVLEKDSEQIAEQLRSV 172

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                     L + +++L +++  F+   +S+  + +  + +     ++ E   ++  + 
Sbjct: 173 NKALPSYEKQLLATKQELNILEKGFKAGNISRLRVLEMRQKLASIEQQIAEARGKRSVLE 232

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R       +     A    ++S +  +     +   +++   E       + SP+ G + 
Sbjct: 233 RQAATNEQKIEQLLAEARVKVSDERSKAVSDLSALNARVRSSEAKVSNTVVTSPLKGLVQ 292

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              S       Q    +++IVP +     +AK++P+ I  V++G    V+   +   R  
Sbjct: 293 SVPSTQVGGVIQPGGTVVEIVPLTGKADFKAKLSPRDIGFVRQGQPVRVKVDAFDYSRFG 352

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKN 419
             +  ++KI P  SQ   N + + YYEV++ +    F D      +  G   E   T   
Sbjct: 353 ALRGEVDKISPTTSQ---NERGEIYYEVVISVDKPYFHDDPERFAILPGMTGEADITTGE 409

Query: 420 TTLAQEIIHPITDNWPKIF 438
            ++ Q +  PI  N    F
Sbjct: 410 KSVFQYLWKPIYTNVSVAF 428


>gi|200388079|ref|ZP_03214691.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|199605177|gb|EDZ03722.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
          Length = 396

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 136/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 16  QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  + + L 
Sbjct: 76  QLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVNDLP 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 129 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 163

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+LT+ + L +  A S  ++ + +R      L++ +   +            
Sbjct: 164 RDALASVNKELTITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 211

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + T+ SP+ G +   Q  + 
Sbjct: 212 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTI 262

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 263 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 322

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 323 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 381

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 382 LIKP----FNRA 389


>gi|253687386|ref|YP_003016576.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251753964|gb|ACT12040.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 389

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 73/422 (17%), Positives = 145/422 (34%), Gaps = 63/422 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +  +  LS++G++    W+    ++     SG++        I+S   GII +  V+ 
Sbjct: 15  RRVSVIIWLSLLGLVVFFIWATFAVLDEVSVGSGKVTPSTRAQVIESLDGGIIGQLYVQQ 74

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAF 131
           G+ + +G  L   +      +       ++ LR     +  E S      +   + E A 
Sbjct: 75  GNVVEKGQVLAQLDVNRFQSVYGEAFSRVQTLRASAERLHAELSGEPLKFSAETLKEPAL 134

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +RE QL +   +                                         + L+  
Sbjct: 135 AARERQLYESRLRNRDET-----------------------------------VANLQQS 159

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   +++L M + L ++ A S  ++ +  R +     E+R  I E +N            
Sbjct: 160 MRLVEQELRMTEPLVQRGAASAVEVIRLRRQIS----EIRGKIDEARN------------ 203

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 Y      +  +N      +M  ++      ++ TI SP+ G +   Q  +    
Sbjct: 204 -----QYAVRAREEQVKNNADLEAQMEVVSGKADQLKRATITSPVRGIVKDIQVTTVGGV 258

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q    LM+IVP      I  ++ P+ I +++ G  ATV+   Y           +E + 
Sbjct: 259 LQPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKITAYDSSIYGNLTGEVESVS 318

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           P   Q +   + Q YY V ++ T       +     +  G  A V       ++   +I 
Sbjct: 319 PDTLQDEV-RRDQFYYRVYVRTTQAELTNKAGEKFPIVPGMVASVEIKTGQKSVLDYLIK 377

Query: 429 PI 430
           P+
Sbjct: 378 PL 379


>gi|83311477|ref|YP_421741.1| membrane-fusion protein [Magnetospirillum magneticum AMB-1]
 gi|82946318|dbj|BAE51182.1| Membrane-fusion protein [Magnetospirillum magneticum AMB-1]
          Length = 468

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 66/424 (15%), Positives = 153/424 (36%), Gaps = 16/424 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++   LL+       + W+    +    ++ G+I+    V  ++    GI++     +G 
Sbjct: 56  IRFTMLLASTTTAAFVVWASFTDVPEIATAEGQIIPTGQVQAVQHLEGGIVQDILARDGD 115

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G P++     +    ++  +     L    +  ++  +     +  + K ++    
Sbjct: 116 LVEAGAPIVRLNAAQAISDLEQTRAREATLLIKAERLRALAEERQPDFSNMPKGYD---- 171

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +  S    +FN    +   S  + L++M     +   LE++   LR  L   Q
Sbjct: 172 -------RLMSDNMAIFNSQSQARDTSRSVILSQMEQKRSDLRLLESQERSLREQLGPLQ 224

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +++TM + L  K  VS+      +R + +   EL   I ++      ++E+ +      +
Sbjct: 225 EEMTMRQELVAKGLVSRVVFLDTKRELSRVQGELARLIGQEVTAREALSEVENRLMDNKS 284

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           +  K    DL       A     +  LE    +  I++P+ G +      +     Q   
Sbjct: 285 SLQKSTMDDLGTTINELAQVQESIGRLEDRVARLEIIAPVRGLVKGLTVKNQGAVIQAGG 344

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            + ++VP      + AK+  K + H+K G    V+   Y   R       + KI      
Sbjct: 345 NVCEVVPVETQMKVDAKINTKDVGHLKIGQPVRVKVTTYDFARYGAVDGTLTKISASSFA 404

Query: 377 QDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            +   +   +++ ++ +    +  +     ++ G          + TL Q ++ PI    
Sbjct: 405 DE---KGNPFFKGVIDLKHNYVGLTPGRYGIQPGMSVTAEIITGDKTLLQYMLKPIFTQI 461

Query: 435 PKIF 438
            + F
Sbjct: 462 QQSF 465


>gi|207858039|ref|YP_002244690.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|206709842|emb|CAR34194.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
          Length = 387

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 135/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 7   QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 66

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  + + L 
Sbjct: 67  QLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVNDLP 119

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 120 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 154

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+L + + L +  A S  ++ + +R      L++ +   +            
Sbjct: 155 RDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 202

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + TI SP+ G +   Q  + 
Sbjct: 203 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTIRSPVRGIVKNIQVTTI 253

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 254 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 313

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 314 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 372

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 373 LIKP----FNRA 380


>gi|171058443|ref|YP_001790792.1| HlyD family type I secretion membrane fusion protein [Leptothrix
           cholodnii SP-6]
 gi|170775888|gb|ACB34027.1| type I secretion membrane fusion protein, HlyD family [Leptothrix
           cholodnii SP-6]
          Length = 453

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 66/434 (15%), Positives = 166/434 (38%), Gaps = 16/434 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
              A  ++  L+  + ++  + W    P+  +V +SG +  + N   ++    G ++   
Sbjct: 24  KARAITRQGRLIGGVLLLPALAWLSFAPLASAVVASGHVKVDLNRSIVQHAEGGTVRAVY 83

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLE 128
           V +G ++  G PL+   D+            +   R     ++TE++    L    +++ 
Sbjct: 84  VRDGQKVRAGDPLIELGDVSVNADKTRLMQRLLAERAGLARLETEQAGGKTLAYPPELIA 143

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              +         + ++      +F   + ++     + + +   I      L+ +    
Sbjct: 144 AGRDDP------VVREHMDKELALFTARLHALDSQAGLLVKQRAKIQQEIASLQAQIGNA 197

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  + +  ++L +  +L ++  VS+  + Q E  +     ++ E   E     + I ++ 
Sbjct: 198 RDSIQAQSRELALNTSLAKQGLVSETQVMQLEASIADYRGKMAERSAEMARADQRIGDIE 257

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
              +    +Y ++ S  L+       +   +L       +++ + + + G ++  +  S 
Sbjct: 258 LRLSQSRNDYRQQASDQLKVANVRVQEIEQELRKATDASKRQVLSASVDGEVIGLRITSP 317

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  +P+ +IVP +    + A++  + I  V++G  A +RF  +     +  K  + 
Sbjct: 318 GGVIAPREPVGEIVPANPRLVVEAQIRTEDINRVQRGQGADLRFTAFKYRTTQMVKGSVS 377

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAF-----SDNNIELRNGFPAEVLFTAKNTTLA 423
            +     +Q +      YY V + +   A       + +  L+ G PAEV    +  T  
Sbjct: 378 YVGAD--RQVDKDNGMAYYVVTIDVPPDAIERAVTGEAHARLQAGMPAEVYLHGEERTPL 435

Query: 424 QEIIHPITDNWPKI 437
           Q ++ PIT    + 
Sbjct: 436 QYLMEPITQVMRRA 449


>gi|329848066|ref|ZP_08263094.1| protease secretion protein prtE [Asticcacaulis biprosthecum C19]
 gi|328843129|gb|EGF92698.1| protease secretion protein prtE [Asticcacaulis biprosthecum C19]
          Length = 468

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 68/430 (15%), Positives = 148/430 (34%), Gaps = 14/430 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++   L+  I  + L+ W+    ++ +V +SG+I    N  E+     GII    V+ G 
Sbjct: 44  IRFGLLVVFIFFVVLMGWATFARVDAAVYASGQIAVVGNRQEVAHKEGGIIAALHVKEGD 103

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            + +G  L+T    ET    +        +K     +  E+   +      +     F  
Sbjct: 104 VVRKGQELITMSGDETEANANALMAQFIDLKTREARLLAEQGLRNSFAEPVE-----FAD 158

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             E     + +      K      + +   + +   R+       +  + + +  +   +
Sbjct: 159 LPEAFRPVIDESMDLQRKTMASNRTFLASQMSVLEQRVAQSEQQIIGNQEQMTSNQTRQA 218

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             + +L  +++L  +       +   +  +     E      +       I E   ++  
Sbjct: 219 LTKDELKGVEDLNARGYAPTTRVRALQESIAGMEGEYGALRAQVAAARAQIGETQMQSVG 278

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               YL ++  DL   Q        +L       ++  + +   G ++  Q F+     Q
Sbjct: 279 IRKQYLDQVMADLNDTQGRLKTMEPQLVAARAAYDRLHVRATATGKVMGLQVFTVGGVIQ 338

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q L+ IVP S    I+A V  +    +K G  A VRF    +      +  +  +   
Sbjct: 339 PGQKLLDIVPESTPLVIQAMVPARNGNDIKSGQIAQVRFVSLHEHSAPILEGKVLDVSGD 398

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFS----DNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                +      +Y   ++I+    +        +L+ G P EV+   +  T+ Q ++ P
Sbjct: 399 SF--TDKESGNTFYTARVQISPETLATLSRMGTEQLKPGLPVEVVVPMRERTVLQYLLEP 456

Query: 430 ITDNWPKIFE 439
           +  +  K F 
Sbjct: 457 LNQSLWKTFR 466


>gi|304391431|ref|ZP_07373373.1| type I secretion membrane fusion protein, HlyD [Ahrensia sp.
           R2A130]
 gi|303295660|gb|EFL90018.1| type I secretion membrane fusion protein, HlyD [Ahrensia sp.
           R2A130]
          Length = 440

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 61/414 (14%), Positives = 143/414 (34%), Gaps = 20/414 (4%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            + W+    IE   S  G ++    +  ++S   GII++  V  G  +  G  L+T +D 
Sbjct: 40  FVAWAWFFEIEERTSGQGRVIPSSQLQVVQSLEGGIIREIGVATGDIVEAGQLLMTIDDT 99

Query: 91  ETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +  +     ++ ++   +  +  E    + L               E+      K  +
Sbjct: 100 GFSSTLGEVTSRRQALLTEQVRLRAEARGDETLKF------------AEEFAVANPKLVA 147

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + ++VF      +   L++   R+        +   + + L       +K+ T+ + L  
Sbjct: 148 SETEVFQSRQQQLIAELEVLDDRLIQRQGELAEARARQTKLATTAEPLRKETTLTRRLVR 207

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  V + D  +    + +   ++     +   +   I+E   +       Y    +  L 
Sbjct: 208 RGVVPEVDYLRLASRLAEIDGDIAVAEAQIPKLEAAISEAKKQLVSTRNTYKLAANERLA 267

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + Q   A         E    +  + SP+ G +      +     Q   PL+++VP    
Sbjct: 268 KLQGELAVLQQTELGAEDRVSRTQLRSPVRGVVNKVNIATVGAVVQPGAPLVEVVPSEDG 327

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + A + P+ +  ++ G  A+V+   Y  +        + +I        N    ++++
Sbjct: 328 LLVEASIRPQDVAFIRVGGKASVKLTAYDYLIYGSLDGEVTRIGADSITDPN---GEQFF 384

Query: 388 EVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           ++ +K       DN     +  G  A V       T+   ++ P+     + F 
Sbjct: 385 QITVKTEKNHLGDNPERNRISPGMVASVDIQTGTNTVLTYLLKPVLRARAEAFR 438


>gi|149202095|ref|ZP_01879068.1| Type I secretion membrane fusion protein, HlyD [Roseovarius sp.
           TM1035]
 gi|149144193|gb|EDM32224.1| Type I secretion membrane fusion protein, HlyD [Roseovarius sp.
           TM1035]
          Length = 399

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 68/420 (16%), Positives = 149/420 (35%), Gaps = 55/420 (13%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
             M  L    +   I W+    I+  V + GE ++      I++   GI+ +  V+ G  
Sbjct: 24  SLMVWLCAASVWIFILWAAFAWIDEIVRAPGEFISTSRPQIIQNLEGGILAELLVQEGDV 83

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L    D      +   +  I  L       ++ L                    
Sbjct: 84  VARGDVLARLHDTRFNSEVADLQDQIAGLEVRQLRLEAELA------------------- 124

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                G++  T           +  S +  L   +  ++ R +        + ++    +
Sbjct: 125 -----GQFDFTVPDGLAGQAGEMVASERALLKARQEDFVKRSE------GAKRVMQQSAE 173

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +  +++ L EK  V+  ++ +  +    S               +  +E+  +A LE A 
Sbjct: 174 EKRLLEGLLEKKIVALIEVTRARKAHADSE--------------KRYDEIITQAELERAE 219

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
              E  ++L       A     L   +    +  +LSP+ G +      +     +  + 
Sbjct: 220 AYSETLKEL-------ATLRQNLRASQDQLNRTVLLSPLRGVVNNLSVTTIGGVVRPGEE 272

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +++I+P  +  ++ A+V P+ I ++++G  AT++   Y        K  ++ I     + 
Sbjct: 273 ILEIIPLDEEMFVEARVEPRNIANIRRGQEATIKLTAYDYTIYGTLKGRVDFISADTFKD 332

Query: 378 D--NNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           +         +Y+V L++   A       IE+R G  AEV       T+ Q ++ P+  +
Sbjct: 333 ERAREADGDPHYKVSLRVDMSALTPRQAGIEIRPGMQAEVELHTGEKTVLQYLLKPLYKS 392


>gi|168464133|ref|ZP_02698050.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|194446689|ref|YP_002041955.1| type I secretion membrane fusion protein HlyD family [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|238909534|ref|ZP_04653371.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Tennessee str.
           CDC07-0191]
 gi|194405352|gb|ACF65574.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|195633766|gb|EDX52180.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|320087172|emb|CBY96939.1| Alkaline protease secretion protein aprE [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 396

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 135/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 16  QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  +   L 
Sbjct: 76  QLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVSDLP 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 129 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 163

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+LT+ + L +  A S  ++ + +R      L++ +   +            
Sbjct: 164 RDALASVNKELTITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 211

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + T+ SP+ G +   Q  + 
Sbjct: 212 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTI 262

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 263 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 322

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 323 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 381

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 382 LIKP----FNRA 389


>gi|307292901|ref|ZP_07572747.1| type I secretion membrane fusion protein, HlyD family [Sphingobium
           chlorophenolicum L-1]
 gi|306880967|gb|EFN12183.1| type I secretion membrane fusion protein, HlyD family [Sphingobium
           chlorophenolicum L-1]
          Length = 460

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 65/432 (15%), Positives = 147/432 (34%), Gaps = 16/432 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++    ++++  +  + W+    ++ +  + G +        ++    G++    V+ G 
Sbjct: 34  MRTGVAIAVLFFVIFLGWAAFARLDAAAYAPGRLTVSGQRQSVQHRDGGVVGAIFVKEGQ 93

Query: 77  QILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            + QG PL+     E      +   + + +K  R  +  E+     +    +     F +
Sbjct: 94  HVRQGQPLMELASAEVRAQARMYGAQYIELKAQRARLIAEQLGASHVEWPVE-----FAA 148

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            + Q  +   +        FN   S +     +   +   +        ++ +       
Sbjct: 149 MKGQEKEDAEEAIRLQLTQFNARSSVLAAQTGVLRQQADQVRQTERGYRSQLAASSEQAR 208

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++L  ++++ EK  VS++ +   ER       +  +             E   +A  
Sbjct: 209 LIGEELNSLRDVAEKGFVSKSRIRALERARADLQGQEGQFSASIARSGAEAGENRLKALE 268

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               Y +  + +L   + +  + + K    +    +  I +P  GT V    F+      
Sbjct: 269 AEKAYKERAASELRDVEFSLNEVLPKYRAAKDQLARLQIRAPATGTTVGLSIFTVGGVIS 328

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q LM IVP      I A+++P  I  +K G  A +RF    +         I ++   
Sbjct: 329 PGQKLMDIVPDRAGLVIEARISPDDIDDLKIGQKAQIRFNSLHERDLPIMDGQISRLSAD 388

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFS------DNNIELRNGFPAEVLFTAKNTTLAQEII 427
             Q +       +Y   + +              +  L+ G PA+VL   +  T  Q  +
Sbjct: 389 SFQDEKT--GASFYTAEVIVPPAELKTIRSLRGGDFNLKAGMPAQVLVPLRQRTALQYAL 446

Query: 428 HPITDNWPKIFE 439
            P+T +    F 
Sbjct: 447 EPLTQSLWLSFR 458


>gi|213424850|ref|ZP_03357600.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Typhi str. E02-1180]
 gi|213612894|ref|ZP_03370720.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-2068]
 gi|213852844|ref|ZP_03382376.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Typhi str. M223]
 gi|289824495|ref|ZP_06544058.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
          Length = 396

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 64/432 (14%), Positives = 135/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 16  QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  +   L 
Sbjct: 76  QLTVREGDRVQANQIVAQLDPTRLASNVGESAAKYRASLA-------SSARLTAEVSDLP 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 129 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 163

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+LT+ + L +  A S  ++ + +R      L++ +   +            
Sbjct: 164 RDALASVNKELTITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 211

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + TI SP+ G +   Q  + 
Sbjct: 212 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTIRSPVRGIVKNIQVTTI 262

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 263 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 322

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 323 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 381

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 382 LIKP----FNRA 389


>gi|167553505|ref|ZP_02347254.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992475|ref|ZP_02573573.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168244717|ref|ZP_02669649.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|194451688|ref|YP_002046696.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|197263974|ref|ZP_03164048.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|194409992|gb|ACF70211.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|197242229|gb|EDY24849.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|205322057|gb|EDZ09896.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329337|gb|EDZ16101.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205336477|gb|EDZ23241.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|312913714|dbj|BAJ37688.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|321223485|gb|EFX48550.1| Putative HlyD family secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323131035|gb|ADX18465.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Typhimurium str. 4/74]
          Length = 396

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 62/432 (14%), Positives = 135/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 16  QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  + + L 
Sbjct: 76  QLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVNDLP 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 129 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 163

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+L + + L +  A S  ++ + +R      L++ +   +            
Sbjct: 164 RDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 211

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + T+ SP+ G +   Q  + 
Sbjct: 212 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTI 262

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 263 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 322

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 323 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 381

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 382 LIKP----FNRA 389


>gi|294675739|ref|YP_003576354.1| hemolysin D [Rhodobacter capsulatus SB 1003]
 gi|294474559|gb|ADE83947.1| type I secretion membrane fusion protein, HlyD family [Rhodobacter
           capsulatus SB 1003]
          Length = 390

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 75/424 (17%), Positives = 157/424 (37%), Gaps = 59/424 (13%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +     L  + I+  + WS    I+  V   GEI++      I++   GI+ +  V  
Sbjct: 14  RRMSWTIWLIGLSILAFLVWSAYARIDQIVRGPGEIVSSSKPQIIQNLEGGILAELNVSE 73

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAF 131
           G ++  GT L    +      +D  K  I  L   +  ++ E + LD            F
Sbjct: 74  GDEVSPGTVLGRLHETSYRTQVDDLKAQIAALEIRQLRLEAEMNGLDE-----------F 122

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              EEQ             ++    + S    L  +L+          D  ++     A+
Sbjct: 123 VPSEEQ------------DRLVPEIVKSESALLLARLS----------DYASRKKGAAAI 160

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L   + +  M++ +FE++     ++ +  +    +  +L              N++  +A
Sbjct: 161 LKQAKAERDMLEKMFERDVAPLIEVTKARKAYSDAEAQL--------------NDITTKA 206

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            L+ A+       D  +          +L + E    + T+ SP+ G +      +    
Sbjct: 207 ELDRAS-------DYSETLEKLGTLRQQLKLSEDQLTRTTLTSPMHGIVNKLSVTTIGGV 259

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +  + +++I+P  +  +I A++ PK I +VK G  AT++   Y        +  +  + 
Sbjct: 260 VRPGEEILEIIPLDEELFIDARIAPKDIANVKLGQAATIKLSAYDYTIYGSLQGAVHFVS 319

Query: 372 PIISQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
               + +     + YY+V L++    L      +E+R G  A V       T+ Q ++ P
Sbjct: 320 ADTFKDEQKPDAEPYYKVTLRVDLARLTERQRRLEIRPGMQATVELYTGEKTVLQYLLKP 379

Query: 430 ITDN 433
           +  +
Sbjct: 380 LYKS 383


>gi|194735786|ref|YP_002115703.1| type I secretion membrane fusion protein, HlyD family protein
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|204929588|ref|ZP_03220662.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|194711288|gb|ACF90509.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|204321307|gb|EDZ06507.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|322614460|gb|EFY11391.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322621475|gb|EFY18328.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322624336|gb|EFY21169.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322629365|gb|EFY26143.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322633605|gb|EFY30347.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322638352|gb|EFY35050.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322639790|gb|EFY36473.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322647349|gb|EFY43845.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649255|gb|EFY45692.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322656025|gb|EFY52325.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322661419|gb|EFY57644.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322662619|gb|EFY58827.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322666992|gb|EFY63167.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322671361|gb|EFY67484.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322677632|gb|EFY73695.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322681542|gb|EFY77572.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322683942|gb|EFY79952.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|323195511|gb|EFZ80689.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323200434|gb|EFZ85514.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323203062|gb|EFZ88094.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323205303|gb|EFZ90278.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323210547|gb|EFZ95431.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str. 556152]
 gi|323218172|gb|EGA02884.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323221562|gb|EGA05975.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323227677|gb|EGA11832.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323230935|gb|EGA15053.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323234713|gb|EGA18799.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323238752|gb|EGA22802.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323241452|gb|EGA25483.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323246851|gb|EGA30818.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323253250|gb|EGA37080.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323257046|gb|EGA40755.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323260481|gb|EGA44092.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323264462|gb|EGA47968.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323269597|gb|EGA53050.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
          Length = 396

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 135/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 16  QRERAFSGASRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  +   L 
Sbjct: 76  QLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVSDLP 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 129 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 163

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+LT+ + L +  A S  ++ + +R      L++ +   +            
Sbjct: 164 RDALASVNKELTITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 211

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + T+ SP+ G +   Q  + 
Sbjct: 212 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTI 262

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 263 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 322

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 323 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 381

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 382 LIKP----FNRA 389


>gi|241761505|ref|ZP_04759593.1| type I secretion membrane fusion protein, HlyD family [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|241374412|gb|EER63909.1| type I secretion membrane fusion protein, HlyD family [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
          Length = 393

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 68/426 (15%), Positives = 148/426 (34%), Gaps = 57/426 (13%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            R+  + ++ ++    W+    +E   + +G+++   +   I+S   GI+ +  V+ G  
Sbjct: 22  ARIVWIVVVMLLCFFIWAACFTLEEVSTGTGKVVPSSHEQTIQSLEGGILVRLNVKEGDI 81

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L   +   T   ++                ++ ++     +    +A+ +  + 
Sbjct: 82  VQAGQMLAQLDRTRTQSSVEETAARAVAAEATAARLRAEVNNTPISFPDSVRAYPALVKS 141

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D                   +YRS              R  L    S L   L+  + 
Sbjct: 142 ETD-------------------LYRSR-------------RNSLAMGLSDLHQQLALIKN 169

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +LTM + L  + A S  ++ + +R                      ++E+   A+     
Sbjct: 170 ELTMTEPLVARGAASDVEVLRLKR---------------------QVSEIDTRADDMQNQ 208

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           Y+ +   DLE+ +     + S         ++ T  SP+ G +   +  +       +  
Sbjct: 209 YMVKAREDLEKAEAEAKAQQSVTKGRSDMLDRLTFTSPVRGIVKDIEVTTKGGVIPPNGR 268

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP  +   + A+++P+ I  +  G  ATV+   Y         A +  I P   Q 
Sbjct: 269 LMTIVPLDEQLLVEARISPRDIAFIHPGQRATVKLTVYDYAIYGGLPAKVTVISPDTVQD 328

Query: 378 DNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
           D   +   YY V ++      ++       +  G  A +     + T+ + ++ P+    
Sbjct: 329 DV-RKDSYYYRVWVRTDSDHLTNKSGHKFPIVPGMVATIDIHTGSKTVLEYLVKPLNRAK 387

Query: 435 PKIFER 440
             + ER
Sbjct: 388 EALRER 393


>gi|196234064|ref|ZP_03132899.1| type I secretion membrane fusion protein, HlyD family
           [Chthoniobacter flavus Ellin428]
 gi|196221913|gb|EDY16448.1| type I secretion membrane fusion protein, HlyD family
           [Chthoniobacter flavus Ellin428]
          Length = 445

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 69/446 (15%), Positives = 140/446 (31%), Gaps = 73/446 (16%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R        +  L +  + GL+ W+    IE      G+++   +V  I+S   G++++
Sbjct: 55  RRVAGGFRGWLPWLCLALVGGLVWWASWAEIEEVTRGVGKVIPSQSVQLIQSLEGGLVEE 114

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDV 126
             V+ G  + +  PLL   D       +        L   +     E      L      
Sbjct: 115 IYVKEGQVVEKDQPLLRIRDAIFASSYNENLAKRDTLEARLCRLAAESQGFTELTFP--- 171

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                +S    L +   K +    +                            D      
Sbjct: 172 -----DSVRPDLAELERKLYEKRKQ----------------------------DYVTTKQ 198

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L A L   +++  ++K+  +  AVS  +L +                       + + +
Sbjct: 199 SLEARLKLAREEERLLKDGTKSRAVSAVELIR---------------------ASQEVQQ 237

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  ++     +  ++      Q++      +  L   +   ++  I +P+ GT+      
Sbjct: 238 LDGQSQTLDTSTQRDAMEHYHQDKADLDSLVQALKRDKDRLDRTLIRAPVRGTVNKIYIN 297

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +  +M IVP      I A V P  I  ++ G  A V+F  Y        K  
Sbjct: 298 TVGRVIGSAVDIMDIVPTDDTLLIEANVRPADIAFIRPGQPAMVKFTAYDFAIYGGLKGT 357

Query: 367 IEKIDPIISQQDNNLQT---------QEYYEVILKITDLAFSD----NNIELRNGFPAEV 413
           +E+I       D N            + +Y++ ++    +         +E+  G  AEV
Sbjct: 358 LERISVDTISADKNRTKSDNKNENRDESFYQIKVRTAKNSLGKDRQGKELEIIPGMVAEV 417

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIFE 439
                  T+   ++ PI     + F 
Sbjct: 418 DVLTGKKTVLTYLLKPINRAKMRAFR 443


>gi|56414657|ref|YP_151732.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161615627|ref|YP_001589592.1| hypothetical protein SPAB_03410 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197363584|ref|YP_002143221.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56128914|gb|AAV78420.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|161364991|gb|ABX68759.1| hypothetical protein SPAB_03410 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197095061|emb|CAR60607.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 387

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 135/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 7   QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 66

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  +   L 
Sbjct: 67  QLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVSDLP 119

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 120 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 154

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+LT+ + L +  A S  ++ + +R      L++ +   +            
Sbjct: 155 RDALASVNKELTITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 202

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + T+ SP+ G +   Q  + 
Sbjct: 203 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTI 253

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 254 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 313

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 314 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 372

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 373 LIKP----FNRA 380


>gi|303327183|ref|ZP_07357625.1| LapA secretion membrane fusion protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863171|gb|EFL86103.1| LapA secretion membrane fusion protein [Desulfovibrio sp. 3_1_syn3]
          Length = 452

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 135/398 (33%), Gaps = 21/398 (5%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            ++      G+++       I++   GI+++  V  G  + +   L   +++        
Sbjct: 61  ELDEVTHGQGQVVAAQRTQVIQNLEGGILREILVREGDVVEKNQLLARLDNLGAASQYRE 120

Query: 99  KKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                   +     ++ EK+  + + +              +L +   +  S   ++F  
Sbjct: 121 AMNKALENQVALVRLEAEKNGTEPVFS-------------AELREKAPQIVSDQEEMFQT 167

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                    ++  ++ +    +  + + +   L   L+  ++   + K L ++   S+ D
Sbjct: 168 RRDKFISEAQLLESQYKQRLEDVDEQQGRKVQLEKTLALAEERRDIAKPLVDRKLFSKVD 227

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
               E+ V     ++               E   +  L  A    +IS ++ + +     
Sbjct: 228 YLDLEQRVVTLGGDIEALSSTMSKAKEAAEEARRKLALRKAEMEAQISEEINKRRTELTS 287

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
               L+       +  + SP+ GT+      +     +   P+M++VP      + A++ 
Sbjct: 288 LQEVLSAGGDRVTRTELRSPVRGTVKRVVVNTLGGVVRPGDPVMEVVPLDDTLLVEARIR 347

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           P  I  +     A V+   Y        +A +E+I     +     + + YY V L+   
Sbjct: 348 PADIAFIHADQKAMVKISAYDFSIYGGLEARVEQISADTIED---RKGEYYYLVKLRTQK 404

Query: 396 LAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            A    +  + +  G  A V   +   ++   ++ PI 
Sbjct: 405 NAINYRNEQLPIIPGMVASVDIISGKKSILDYLLKPIL 442


>gi|62181265|ref|YP_217682.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224584542|ref|YP_002638340.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|62128898|gb|AAX66601.1| putative HlyD family secretion protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224469069|gb|ACN46899.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322715750|gb|EFZ07321.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 396

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 62/432 (14%), Positives = 135/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 16  QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  + + L 
Sbjct: 76  QLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVNDLP 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 129 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLSDTEAEL 163

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+L + + L +  A S  ++ + +R      L++ +   +            
Sbjct: 164 RDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 211

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + T+ SP+ G +   Q  + 
Sbjct: 212 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTI 262

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 263 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 322

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 323 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 381

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 382 LIKP----FNRA 389


>gi|16761544|ref|NP_457161.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29143015|ref|NP_806357.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|25512998|pir||AG0835 probable type I secretion protein STY2878 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503845|emb|CAD05870.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138648|gb|AAO70217.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 387

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 64/432 (14%), Positives = 135/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 7   QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 66

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  +   L 
Sbjct: 67  QLTVREGDRVQANQIVAQLDPTRLASNVGESAAKYRASLA-------SSARLTAEVSDLP 119

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 120 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 154

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+LT+ + L +  A S  ++ + +R      L++ +   +            
Sbjct: 155 RDALASVNKELTITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 202

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + TI SP+ G +   Q  + 
Sbjct: 203 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTIRSPVRGIVKNIQVTTI 253

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 254 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 313

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 314 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 372

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 373 LIKP----FNRA 380


>gi|294788540|ref|ZP_06753782.1| protein secretion ABC efflux system, membrane fusion protein
           [Simonsiella muelleri ATCC 29453]
 gi|294483417|gb|EFG31102.1| protein secretion ABC efflux system, membrane fusion protein
           [Simonsiella muelleri ATCC 29453]
          Length = 409

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 71/448 (15%), Positives = 157/448 (35%), Gaps = 66/448 (14%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +   L+      L  + ++  + I   + W+    +E      G ++       ++S 
Sbjct: 18  NDLNAALQTEKHRGLFAVIVILFLLITAFVVWAYNSKVEEVTRGQGSVIPSSREQIVQSL 77

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G I + +V+ G  + +G  LL  +D  ++ ++      + NL   +   ++    +  
Sbjct: 78  DPGTIAEMKVKEGDIVEKGQVLLKMDDTRSSAILRESAAKVVNLEAMVSRLRAEAYGMPL 137

Query: 123 KY-DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           K+ D + K    RE    +                             R RS+    + L
Sbjct: 138 KFADHIPKELRQREAAAFE----------------------------ARRRSVVDAVVGL 169

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
               + L        K++ +   + ++  +S+ +L + +R   +  L++ E         
Sbjct: 170 HQNKATLD-------KEIAITAPMVKQGVMSEVELLRMQRESSQLALQISE--------- 213

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                       +   Y  E + +L + +   A     + +     E+  I +P+ G + 
Sbjct: 214 ------------KQNQYAAEANNELVKTEAELAQARENMAMRADPVERSEIRAPLRGIVK 261

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             Q  +     Q  Q +++IVP      + A + P+ +  ++ G  A V+   Y      
Sbjct: 262 NIQINTVGGVVQAGQDILEIVPLDDKLLVEAYIRPQDVAFMRPGLEAVVKLSAYDFAIYG 321

Query: 362 KFKAIIEKIDPII------SQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAE 412
                +  I P        + +    Q Q+YY ++++    +  D N   +++  G  A 
Sbjct: 322 GLHGKVTLISPDTLSNQKRADELKLDQNQQYYRILVETDGNSIKDKNGKSMQIIPGMVAT 381

Query: 413 VLFTAKNTTLAQEIIHPITDNWPKIFER 440
           V       T+   +I PIT     + ER
Sbjct: 382 VDVKTGEKTVFDYLIKPITRLKQALRER 409


>gi|194469014|ref|ZP_03074998.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194455378|gb|EDX44217.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
          Length = 396

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 135/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 16  QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  +   L 
Sbjct: 76  QLTVREGDRVQANQIVARLDPTRLASSVGESAAKYRASLA-------SSARLTAEVSDLP 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 129 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 163

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+LT+ + L +  A S  ++ + +R      L++ +   +            
Sbjct: 164 RDALASVNKELTITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 211

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + T+ SP+ G +   Q  + 
Sbjct: 212 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTI 262

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 263 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 322

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 323 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 381

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 382 LIKP----FNRA 389


>gi|16766006|ref|NP_461621.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|16421238|gb|AAL21580.1| putative HlyD family secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|261247882|emb|CBG25712.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267994837|gb|ACY89722.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301159251|emb|CBW18766.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|332989616|gb|AEF08599.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 387

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 62/432 (14%), Positives = 135/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 7   QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 66

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  + + L 
Sbjct: 67  QLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVNDLP 119

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 120 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 154

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+L + + L +  A S  ++ + +R      L++ +   +            
Sbjct: 155 RDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 202

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + T+ SP+ G +   Q  + 
Sbjct: 203 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTI 253

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 254 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 313

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V ++       +       +  G  A V       T+   
Sbjct: 314 TISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 372

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 373 LIKP----FNRA 380


>gi|331659159|ref|ZP_08360101.1| putative HlyD family secretion protein [Escherichia coli TA206]
 gi|331053741|gb|EGI25770.1| putative HlyD family secretion protein [Escherichia coli TA206]
          Length = 415

 Score =  271 bits (692), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 67/437 (15%), Positives = 157/437 (35%), Gaps = 64/437 (14%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            +   L++    +L  M +  ++ ++  + W+   P++      G I+       I++  
Sbjct: 25  DVQAALQQEKHHALFLMVIFLLLLVVTFVIWAWNSPLDEVTRGQGSIIPGSREQVIQTLD 84

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI+K  +V  G  + +G  LLT +D  +  ++   +  + NL       ++        
Sbjct: 85  PGILKTLEVREGDIVEKGQILLTLDDTRSAAMLRESEARVNNLEAVRARLRAEA------ 138

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                   + S VF  G+    R+ + ++ R++     + +L  
Sbjct: 139 -----------------------YSESLVFPDGVPEDLRARETRVYRLK-----KTELTQ 170

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + L+       +++ M + + +  A+S+ +L + +                       
Sbjct: 171 SLAGLKQRKGLLDREIAMTRPIVQAGAMSEVELLRMQ---------------------GQ 209

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             EL  + + +   YL E   +L + +   A     +       E+  + +P+ G +   
Sbjct: 210 SAELQLQMDDKQNKYLTEAGAELVKTEADLAQAKENMAGRADPVERSRLRAPLRGIVKNI 269

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +        Q +M+I+P      I A + P+ + +V+ G  A V+   Y        
Sbjct: 270 RVNTLGGVVSAGQDIMEIIPLEDQLLIEAYINPRDVAYVRTGMPALVKLTAYDYAIYGGL 329

Query: 364 KAIIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAEVL 414
             ++  + P   +             + +Y V++  ++   +D N   + +  G  A V 
Sbjct: 330 DGVVTLVSPDTLRDQKRPGDLKLNPNEAFYRVLVTTSNNYLTDRNGKKLPVIPGMIASVD 389

Query: 415 FTAKNTTLAQEIIHPIT 431
                 ++ Q +I PIT
Sbjct: 390 IKTGQKSVFQYLIKPIT 406


>gi|126641289|ref|YP_001084273.1| RND efflux transporter [Acinetobacter baumannii ATCC 17978]
          Length = 366

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 68/418 (16%), Positives = 140/418 (33%), Gaps = 57/418 (13%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           IG++    W+    +E   + +G+++       I+S   GI+ K  V+ G  + +G  L 
Sbjct: 3   IGLVIFFIWAWFFKLEEVSTGTGKVIPSSKEQVIQSLEGGILTKLNVQEGDIVQKGQILA 62

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             +       +   +  +   +      ++ +    N   ++     +++ +L+      
Sbjct: 63  QLDPTRFASNVGESRSLLIAAQATAARLRAEV----NGTPLVFPEIVAQDPKLVHEETAL 118

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           + +                             R DLE   S LR  L   Q++L M + L
Sbjct: 119 YESR----------------------------RADLEQTLSGLRQALQLVQQELAMTEPL 150

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             K A S+ ++ +  R                       N+L ++ N     Y  +   +
Sbjct: 151 VAKGAASEVEVLRLRREA---------------------NDLQNKMNDARNQYYVKAREE 189

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L +       +   +     + ++    +P+ G +      +      Q+  LM IVP  
Sbjct: 190 LSKANTDTQTQQQVVMGRNDSLQRAVFKAPVRGVVKEITVTTHGGVIPQNGKLMTIVPID 249

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           +   I A++ P+ I  ++ G  A V+   Y        K  +  I P   + +   Q Q 
Sbjct: 250 EQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGLKGKVTVISPDTIRDEV-KQDQF 308

Query: 386 YYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
           YY V ++       +       +  G  A V       T+   ++ P       + ER
Sbjct: 309 YYRVYIRTDSDKLYNKEGKAFGITPGMVATVDIRTGEKTVLDYLLKPFNKAKEALRER 366


>gi|50084660|ref|YP_046170.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter sp. ADP1]
 gi|49530636|emb|CAG68348.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           (superfamily ABC, membrane) [Acinetobacter sp. ADP1]
          Length = 396

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 65/434 (14%), Positives = 144/434 (33%), Gaps = 57/434 (13%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K         +  +  I ++ L+ W+ +  +E   + +G+++       I+S   GI+ K
Sbjct: 17  KEPPLPRASLIIWIVGIALVILVVWAWVFKLEEVSTGTGKVIPSSKEQMIQSLDGGILTK 76

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V+ G  + +G  L   +       +   +  +   +      ++ +    N   +   
Sbjct: 77  LDVKEGDIVQKGQILAQLDPTRFASNVGESQSLLMAAQATSARLRAEV----NGTPLAFP 132

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               +E +L+      +++                             R +LE   + L+
Sbjct: 133 DEVKQEPKLVQEETALYNSR----------------------------RANLEETVAGLK 164

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L   Q++L M + L  K A S+ ++ + +R       ++ +                 
Sbjct: 165 QALHLVQQELVMTEPLVAKGAASEVEVLRLKREANDLQNKINDA---------------- 208

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                 ++Y  +   +L ++      +   +     T  +    +P+ G +      +  
Sbjct: 209 -----RSSYYVKAREELSKSNTDVQTQQQVIKGRTDTLNRTVFKAPVRGVVKEITVTTLG 263

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
               Q+  LM IVP  +   I A++ P+ I  ++ G  A V+   Y        K  +  
Sbjct: 264 GVVPQNGKLMTIVPLDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGMKGKVTV 323

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           I P   + +   Q Q YY V ++         +     +  G  A V       T+   +
Sbjct: 324 ISPDTIRDEV-KQDQFYYRVYIRTDSDKLYNKAGKAFNITPGMVATVDIKTGQKTIMDYL 382

Query: 427 IHPITDNWPKIFER 440
           + P       + ER
Sbjct: 383 LKPFNKAKEALRER 396


>gi|152982253|ref|YP_001353078.1| HlyD family secretion protein [Janthinobacterium sp. Marseille]
 gi|151282330|gb|ABR90740.1| HlyD family secretion protein, type I secretion pathway
           [Janthinobacterium sp. Marseille]
          Length = 457

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 64/406 (15%), Positives = 140/406 (34%), Gaps = 24/406 (5%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W+ L PI++ V   G I+  D+   I+    GI+    V  G+ + +   L+T  D+ 
Sbjct: 57  VIWAYLAPIDMVVRGQGRIVPSDHNQIIQHLEGGIVSAIVVREGAAVRKDQVLITIRDVR 116

Query: 92  TTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +      +V +  LR     +  E      LN   D+L       E+          + 
Sbjct: 117 ASSDQGEGRVKLLGLRARVARLTAEAGGATQLNLPADMLADPAGQSEQAAFAARQAKLNG 176

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              +     +     L   ++R +S              L    +  Q+   ++ +++ K
Sbjct: 177 ELSILREQTTQRQAELNETISRQKS--------------LTDEYALVQQQYQLVHSMYLK 222

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           +A SQ +  Q +         L         +   I+E   +     + +  E   DL  
Sbjct: 223 SAASQLEDIQAQSRAQDVRSRLSAASSMIPRLRAAISEAQAKVTDGVSRFRAEARADLTT 282

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +   A    ++        +  + +P+ G +      +     +   P++++ P     
Sbjct: 283 AETELARLSEEMKSRNDRVLRSEVKAPMDGVVNRIFVNTVGGVVKPGDPILEMTPIDDKV 342

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            + A + P     +  G  A V+   Y        +  + +I      ++   + + +Y 
Sbjct: 343 VVEANINPTDRAELAIGKPARVKVTAYDYGVFGSMQGKVTEISADTVPEE---KGERHYR 399

Query: 389 VILKIT----DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           V +++T     +  + N++ L  G  A         T+ Q ++ PI
Sbjct: 400 VKIEVTRDPEQIKSAGNSLPLMPGMTATADIVVGRRTVWQYLMSPI 445


>gi|239820610|ref|YP_002947795.1| type I secretion membrane fusion protein, HlyD family [Variovorax
           paradoxus S110]
 gi|239805463|gb|ACS22529.1| type I secretion membrane fusion protein, HlyD family [Variovorax
           paradoxus S110]
          Length = 445

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 70/444 (15%), Positives = 162/444 (36%), Gaps = 16/444 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSII----GIIGLITWSILLPIEISVSSSGEILNEDNVV 57
           H     +    H    +R+T   +     G++    W    P+  +V +   +  + N  
Sbjct: 6   HAIAANDPLALHVREARRLTHWGLAMLVCGLLPAAAWLGFAPLSSAVVAQAYVKVDLNRR 65

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEK 114
            ++    GI+++  V +G  + +G PLL   D+      + +D +  + +     +D E+
Sbjct: 66  PVQHAEGGIVREVLVRDGQHVRKGEPLLVLGDVSVDADRNRLDHRVKTERASLARLDAEQ 125

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +    +    DV+E A           L         +F     ++   +++  ++   +
Sbjct: 126 TMARAIAFPPDVVETAVADPR------LAAQLDKERALFEARRDALVGQVRLLRSQREKV 179

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
               + L  + +     +   + DL   + L +   VS   + Q E  V    +++ E  
Sbjct: 180 AEEIVALRAQIAQASESMKFQKSDLETNRKLLKDGFVSAARIAQFEGTVADYGVKIEERR 239

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E     +   +         ++Y ++ S  L+      A+   +         ++ I +
Sbjct: 240 AELARAEQRTVDADLRIRSLESDYRQQASDQLKVTAARLAEIEQERRKSTDASARQVITA 299

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P +G I+  +  +        + +  +VP        A+V P+ I  V++G  A +RF  
Sbjct: 300 PASGEIIDLKYSTPGAVIPPRETIADVVPDDSRLMTDARVRPEDIGRVQRGQAADIRFTA 359

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEV 413
           +     +     +  +     +  +      YY V+++    + +   +++L  G PAE+
Sbjct: 360 FKYRTTQLVHGKVVYVSGD--RLIDRATNAPYYSVLVEADPASLATAGDLKLLAGMPAEI 417

Query: 414 LFTAKNTTLAQEIIHPITDNWPKI 437
               +  T  Q ++ PIT      
Sbjct: 418 YLQGEERTALQYLVEPITQVLRHA 441


>gi|326628832|gb|EGE35175.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 396

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 134/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 16  QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  + + L 
Sbjct: 76  QLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVNDLP 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 129 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 163

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+L + + L +  A S  ++ + +R      L++ +   +            
Sbjct: 164 RDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 211

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + TI SP+ G +   Q  + 
Sbjct: 212 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTIRSPVRGIVKNIQVTTI 262

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 263 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 322

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V +        +       +  G  A V       T+   
Sbjct: 323 TISPDTIQDKVKPEI-FYYRVFILTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 381

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 382 LIKP----FNRA 389


>gi|103488236|ref|YP_617797.1| Type I secretion membrane fusion protein, HlyD [Sphingopyxis
           alaskensis RB2256]
 gi|98978313|gb|ABF54464.1| Type I secretion membrane fusion protein, HlyD [Sphingopyxis
           alaskensis RB2256]
          Length = 421

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 60/414 (14%), Positives = 143/414 (34%), Gaps = 22/414 (5%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + + + +G++  + W+ +  ++      G ++    V  I+S     I++  V +G  + 
Sbjct: 18  IMVAAAVGLVLFLLWASIARVDEISRGQGRVIPSSRVQIIQSAEPSTIREILVRSGQTVE 77

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L+  ++  +   +   +   + L                                 
Sbjct: 78  KGQLLVRLDNTTSQSELGQLETENERLAQRAARLAGEGGSGAG----------------- 120

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
              G      +++     S++   L      +     +  + +  +S L + L   ++ +
Sbjct: 121 -CTGDSCGDEARLAEVRRSALQSQLAALSASVEQRRRDLGEAQATASALESSLRLAREQV 179

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            M++ L  +  V Q +L   +R V      L             I E   E +    ++ 
Sbjct: 180 AMLEPLAARGVVPQTELLTAQREVVDIQGRLAAARQAMSRSQAAIREASAEVSRARFDFQ 239

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +E   +  Q     A     +   E    +  I SP  G +      +   +    + +M
Sbjct: 240 QEALNERSQLTTKMAVNEETIRGAEGRLARSEIRSPARGVVNDLLVNTLGGFVNAGEQIM 299

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +IVP      I  +VTP+ I  +K G  A V+   Y        K  + ++ P     + 
Sbjct: 300 QIVPLGDKLLIETRVTPRDIAFIKVGDPANVKVTAYDFSIYGGLKGKVVRVSPDSIYDE- 358

Query: 380 NLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            ++ + Y+ V+++ T+  L  +   + +  G   +V       ++   ++ P+ 
Sbjct: 359 -VEREAYFTVVVETTNSFLVSNGRRLPITPGMLCDVEILTGKKSVLSYLLKPVL 411


>gi|197103955|ref|YP_002129332.1| RsaA secretion system, membrane protein RsaE rsaE [Phenylobacterium
           zucineum HLK1]
 gi|196477375|gb|ACG76903.1| RsaA secretion system, membrane protein RsaE rsaE [Phenylobacterium
           zucineum HLK1]
          Length = 416

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 78/423 (18%), Positives = 158/423 (37%), Gaps = 15/423 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK-SPFSGIIKKFQVENGSQILQG 81
           +    +IGL  W+ + P+   +++  E+  E N   ++ S   G++K+  V  G  +   
Sbjct: 1   MIGAFVIGLGAWASVTPLSTGITAPAEVRVESNRKTLRGSRQGGVVKQILVREGQHVRAQ 60

Query: 82  TPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            PLL F D+E    +D+ +               E +    L    ++  +A + R   L
Sbjct: 61  QPLLIFNDVEARAAVDVFQNQYDVMLAQNARYSAEATGRSSLTFPAELTSRAADPRVATL 120

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +       +T  ++F    + + +       R+  +      L+ + + +       +++
Sbjct: 121 IRDQEFLFATRLQLFQSQSAVLGQ-------RIEQLETQIQGLQAQVASIDEQRRLTEEE 173

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L+  + L EK    +  + + ER + +      +   E   + + + E   +        
Sbjct: 174 LSGYRTLNEKGYAPKTLILRYERSLAELGGRRGQLAAEIARIRQQMGETRLQLVSLREER 233

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             + +  L ++Q   AD + +LT  ++      I +P+ G +     F+        + L
Sbjct: 234 QSQAAEGLRESQSRMADVVPRLTTAKQDLAATVIRAPVDGYVFNLTQFTVGGVVGSGEVL 293

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M IVP +    + A V P+ +  V  G  A VR         +   A +  I       +
Sbjct: 294 MDIVPATTPLTVSAMVRPEDVDQVHIGMDARVRLTGLNSRFNEDLDAKVAVISADRLTDE 353

Query: 379 NNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
              +   +Y V   +   +L+     +EL  G PA  L      T+   +I PITD    
Sbjct: 354 Q--KGLSFYRVDLRIDPRELSKLKKGVELTPGMPASALIVTGERTVMGYLISPITDVMRD 411

Query: 437 IFE 439
            F 
Sbjct: 412 AFR 414


>gi|82775769|ref|YP_402116.1| putative membrane spanning export protein [Shigella dysenteriae
           Sd197]
 gi|309786866|ref|ZP_07681480.1| type I secretion membrane fusion , HlyD family protein [Shigella
           dysenteriae 1617]
 gi|81239917|gb|ABB60627.1| putative membrane spanning export protein [Shigella dysenteriae
           Sd197]
 gi|308925290|gb|EFP70783.1| type I secretion membrane fusion , HlyD family protein [Shigella
           dysenteriae 1617]
          Length = 391

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 63/427 (14%), Positives = 132/427 (30%), Gaps = 57/427 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + L             ++ + ++  + W+    ++   + SG +        ++S   GI
Sbjct: 9   RGLTEPRLPRSALAVRVTSVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQVVQSLEGGI 68

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+ G  + QG PL      +T   +     ++  L   + T       ++NK  V
Sbjct: 69  LYHLGVKVGDIVEQGQPLAQLNRTKTESDVQE---AMLRLYAALATSARLRAEVSNKPLV 125

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                    E +      Y++                              R  L   ++
Sbjct: 126 FPDELNKFPELIESETALYNT-----------------------------RRDGLNKATT 156

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L   +S   ++L M + L ++ A S  ++ + +R                       NE
Sbjct: 157 GLTQGISLVNRELAMTQPLVKQGAASSVEVLRLQR---------------------QANE 195

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L ++ +     Y  +   +L +         S +   E +  +    +P+ G +      
Sbjct: 196 LENKLSDVRTQYYVQAREELAKANAEVETRRSVIRGREDSLTRLNFTAPVRGIVQDIDVT 255

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +          LM IVP  +   I AK++P+ +  +  G  + V+   Y           
Sbjct: 256 TVGGVIAPGGKLMTIVPLDEKLLIEAKISPRDVAFIHPGQKSLVKITAYDYSIYGGLPGE 315

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           +  I P   Q +       YY V ++         S     +  G  A V       ++ 
Sbjct: 316 VAVISPDTVQDEVRRDV-YYYRVYIRTFSNHLENKSKQQFPIFPGMVATVDIRTGKKSVL 374

Query: 424 QEIIHPI 430
             ++ P 
Sbjct: 375 DYLLKPF 381


>gi|253999693|ref|YP_003051756.1| HlyD family type I secretion membrane fusion protein [Methylovorus
           sp. SIP3-4]
 gi|253986372|gb|ACT51229.1| type I secretion membrane fusion protein, HlyD family [Methylovorus
           sp. SIP3-4]
          Length = 439

 Score =  270 bits (690), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 55/420 (13%), Positives = 142/420 (33%), Gaps = 16/420 (3%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +   +L  + ++ LI W+   P+ + V + G ++   +   ++    G++    V  G  
Sbjct: 30  RHWVVLITVMVVLLIVWAAWAPVRMVVRAEGRVIPSTHSQVVQHLEGGVVLSIDVAEGEF 89

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L    D++    +  ++V  + L   +   K+              A ++   +
Sbjct: 90  VQKGDVLARISDVQGASQMGERRVREQALLARVLRLKAEASGSAIADFHALDASDAIRAE 149

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                        + F      + +  ++   ++        +L  + S L A L   Q+
Sbjct: 150 ------------REAFLARRQRLEQDQRVTTEQVAQKRSELAELMARRSNLAAELELAQR 197

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
              +   + ++ A S+ ++   +  V +    L +       +   I E    +    + 
Sbjct: 198 QQQISNEMMQREAASKLEVLDAQAKVQRLRTMLSDADTSLPRLKAAIAEAEGRSRELESR 257

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  E   DL   Q        +L       E+  + +P++G +      +     +    
Sbjct: 258 FRAEARTDLTAAQTDLQRVQEELKASSDRVERTELRAPVSGIVNRVNVTTIGGVIRPGDA 317

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +++I P  +   + A+V P     +  G    VR   Y        +  + ++       
Sbjct: 318 VVEITPSDEHIVVEARVRPADRAELHPGLPVYVRLSAYDYASFGTTQGRLTEVSADTMPD 377

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           +   + + +Y V + +     +     +  G  A       + T+   +I P+T  + + 
Sbjct: 378 E---KGERFYRVRVGLDGNQRAFAGRPIVPGMVATADIVVGSRTVLAYLISPLT-RFARA 433


>gi|134095130|ref|YP_001100205.1| putative Type I secretion membrane fusion protein, HlyD
           [Herminiimonas arsenicoxydans]
 gi|133739033|emb|CAL62081.1| Putative type I secretion membrane fusion protein, HlyD
           [Herminiimonas arsenicoxydans]
          Length = 456

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 63/406 (15%), Positives = 138/406 (33%), Gaps = 24/406 (5%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W+   PI++ V   G I+  D+   I+    GI+    V  G+ + +   L+T  D+ 
Sbjct: 56  VIWAYFAPIDMVVRGQGRIVPSDHNQIIQHLEGGIVSAIVVREGAAVRKEQVLITIRDVR 115

Query: 92  TTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +      ++ +  LR     +  E S    LN   D+L       E+          + 
Sbjct: 116 ASSDQGEGRIKLLGLRARVARLTAEASGAAQLNLPADMLADLTGQSEQAAFAARQAKLNG 175

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              +    ++     L   ++R +S              L    +  Q+   ++  ++ K
Sbjct: 176 ELSILREQMTQRQAELNETISRQKS--------------LTDEYALVQQQYQLVHAMYLK 221

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           +A SQ +  Q +         L         +   I+E   +     + +  E   DL  
Sbjct: 222 SAASQLEDIQAQSRAQDVRSRLNAASSMIPRLRAAISEAQAKVTDGVSRFRAEARADLTT 281

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +   A    ++        +  + +P+ G +      +     +   P++++ P     
Sbjct: 282 AETELARLSEEMKSRNDRVLRSEVKAPMDGVVNRIFVNTVGGVVKPGDPILEMTPIDDKV 341

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            + A + P     +  G  A V+   Y        +  + +I      ++     + +Y 
Sbjct: 342 VVEANINPTDRAELAIGKPARVKVTAYDYGVFGSMQGRVTEISADTVPEER---GERHYR 398

Query: 389 VILKIT----DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           V +++T     +  + N + L  G  A         T+ Q ++ PI
Sbjct: 399 VKIEVTRDPEQIKSAGNGLPLMPGMTATADIVVGRRTVWQYLMSPI 444


>gi|205353726|ref|YP_002227527.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205273507|emb|CAR38486.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
          Length = 387

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 134/432 (31%), Gaps = 61/432 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 7   QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 66

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  + + L 
Sbjct: 67  QLTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVNDLP 119

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 120 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 154

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L+S  K+L + + L +  A S  ++ + +R      L++ +   +            
Sbjct: 155 RDALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------ 202

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  +    L +         + L   E +  + TI SP+ G +   Q  + 
Sbjct: 203 ---------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTIRSPVRGIVKNIQVTTI 253

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E
Sbjct: 254 GGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVE 313

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQE 425
            I P   Q     +   YY V +        +       +  G  A V       T+   
Sbjct: 314 TISPDTIQDKVKPEI-FYYRVFILTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDY 372

Query: 426 IIHPITDNWPKI 437
           +I P    + + 
Sbjct: 373 LIKP----FNRA 380


>gi|254500127|ref|ZP_05112279.1| putative auxiliary transport protein, MFP family [Labrenzia
           alexandrii DFL-11]
 gi|222441425|gb|EEE48103.1| putative auxiliary transport protein, MFP family [Labrenzia
           alexandrii DFL-11]
          Length = 434

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 80/436 (18%), Positives = 166/436 (38%), Gaps = 16/436 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           K     +P         +I+   G++  W+ +  ++ +V +SGE+  E N  E++    G
Sbjct: 6   KRKASANPRPFIIAGYATILLTFGVVGAWAAIAKLDKAVIASGEVEVEANRREVQHLEGG 65

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNN 122
           I+KK  V  G  +  G  L+   D+E    + +  + ++    +   +  E++  D +  
Sbjct: 66  IVKKKDVAEGQVVKAGDVLIELRDVEARADLQVVTIRLRIGEAVEARLRAERNLEDHIEF 125

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           K  +L        + + D          ++F+   S +     +   R+  +   +L L 
Sbjct: 126 KESLLADKTPEVVDAVAD--------QQRIFDDRTSILKSQQDILTNRVDQLKREKLGLG 177

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +     A        L  ++   E  ++ +N     E    +    +     E   + +
Sbjct: 178 EQKEAYEARAKVLLGRLDRLREGLESGSIQKNLFATYEDEYIEVKAFVASMDTEIAKVEK 237

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I E   +       + +  S + ++      +   +  + +   ++  I +PI G    
Sbjct: 238 SIGETEFQMLQTRQEFRERASTEYKEIYGQIQELREQSKVAQDVLDRTKIRAPIDGVAQN 297

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +        Q+ Q L++IVP +    I A+V P  I  V +G TA V+F  +       
Sbjct: 298 IKLN--GFVIQRGQTLLEIVPDTDEMIINARVQPLDIDSVSEGLTAEVKFTSFPSRLMPI 355

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTT 421
            +  +  +       ++  QT  YY   ++++     ++    L  G PA+VL T+   T
Sbjct: 356 IEGEVLTVSRGTITPEDTRQT-PYYLARVQVSKDVLPEDVRGRLSAGMPADVLITSGERT 414

Query: 422 LAQEIIHPITDNWPKI 437
           +   +I PITD   K 
Sbjct: 415 VVDYMISPITDAIWKS 430


>gi|226951447|ref|ZP_03821911.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter sp. ATCC 27244]
 gi|294650969|ref|ZP_06728310.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter haemolyticus ATCC 19194]
 gi|226837814|gb|EEH70197.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter sp. ATCC 27244]
 gi|292823150|gb|EFF82012.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter haemolyticus ATCC 19194]
          Length = 396

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 72/436 (16%), Positives = 147/436 (33%), Gaps = 61/436 (13%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K     S   +  L  IG++ L+ W+ +  +E   + +G+++       I+S   GI+ K
Sbjct: 17  KEPKLPSSSIIVWLIGIGLVVLLVWAWVFSLEEVSTGTGKVIPSSKEQIIQSLEGGILTK 76

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD--FLNNKYDVL 127
             V+ G  +  G  L   +       +   +  + +        ++ ++   L    +VL
Sbjct: 77  LDVKEGDIVESGQILAQLDPTRFASNVGESQSLLMSAMATAARLRAEVNGTALTFPEEVL 136

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           ++    +EE  L                                   Y  R +LE   + 
Sbjct: 137 KEPKLVKEETAL----------------------------------YYSRRANLEESIAG 162

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +  L   Q++L M + L  K A S+ ++ +  R       +L+  I++ +N        
Sbjct: 163 NQQALRLVQQELAMTEPLVAKGAASEVEVLRLRREAN----DLQNRINDIRN-------- 210

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                     Y  +   +L +       +   +     + ++    +P+ G +      +
Sbjct: 211 ---------QYYVKAREELSKANTDIQTQQQVVKGRTDSLQRAVFRAPVRGIVKEIDVTT 261

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                 Q+  LM IVP      I A+++P+ I  ++    A V+   Y        +  +
Sbjct: 262 LGGVVPQNGKLMTIVPLEDKLLIEARISPRDIAFIRPNQEALVKITAYDYAIYGGLEGKV 321

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQ 424
             I P   + +   Q Q YY V ++         S     +  G  A V       T+  
Sbjct: 322 TVISPDTIRDEV-KQDQFYYRVYIRTDSDRLYNKSGKEFSITPGMVATVDIRTGQKTVLD 380

Query: 425 EIIHPITDNWPKIFER 440
            ++ P       + ER
Sbjct: 381 YLLKPFNKAKEALRER 396


>gi|171058983|ref|YP_001791332.1| HlyD family type I secretion membrane fusion protein [Leptothrix
           cholodnii SP-6]
 gi|170776428|gb|ACB34567.1| type I secretion membrane fusion protein, HlyD family [Leptothrix
           cholodnii SP-6]
          Length = 468

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 143/427 (33%), Gaps = 15/427 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            +   + L    G + L  W+ +  I+    + G+++    V  ++S   GI+++  V+ 
Sbjct: 53  RASSLLLLTITAGFVALAGWASVAEIDTVAQALGKVIPSAKVQMVQSLEGGIVQEIHVKT 112

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G  L++    +       ++      +  +   ++  D     +          
Sbjct: 113 GQAVEAGDLLVSLSQTQVDADFQSRQQQALTHQARVARLQAEADGREPMFAT-------- 164

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             +L     +  +     F    +      +M   ++        +  N     +  L +
Sbjct: 165 --ELQRQHPQNVAVEQAAFRSRQAEQQAQARMLDAQVLQKRAELDESRNAMQTAQRSLQT 222

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            + +  M++ L ++    + +L + +R + ++           +   + I E     +  
Sbjct: 223 ARDERVMVQKLVDQGLEPRIELVRLDRQIAEAEGRYAGAQVAIERTEQAILETSARRDSV 282

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              +  +   +L +           +  LE   E+  + +P+ G +      S     + 
Sbjct: 283 QRQFRAQARDELNRALADLRSLAPAMPALEDRVERTALRAPVRGVVNRVFVNSVGGVTRP 342

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
             P++++VP      + AKV P+ I  V+ G  A V+   Y         A + ++    
Sbjct: 343 GDPVVELVPVEDKLVVEAKVDPRDIGFVRVGQDARVKLTAYDYAIYGAMPAKVVQVGADA 402

Query: 375 SQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
              D       +Y V ++ +  A       + +  G  A+      + T+   ++ P+  
Sbjct: 403 ITNDR---GDSHYIVHIETSQAAVKSLGQELPMLAGMQAQSDIVTGSKTVMNYLLKPLVG 459

Query: 433 NWPKIFE 439
                F 
Sbjct: 460 VRENAFR 466


>gi|294010684|ref|YP_003544144.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292674014|dbj|BAI95532.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 395

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 66/425 (15%), Positives = 145/425 (34%), Gaps = 57/425 (13%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           R+  L   G+I    WS    ++      G++        I+S   GI+    V  G  +
Sbjct: 25  RIIPLVSAGVIAFFIWSYFGVLDEVAVGPGKVTPPSRSQVIQSLEGGIVNGIFVHEGDIV 84

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
                L T +    + ++   +   + L       ++ ++    ++    +A  +     
Sbjct: 85  KPRQQLATLDRARFSSMLGEAEAKARALEAAAARLEAEINGGMPRFSADVQALPALVA-- 142

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                                           M+ +   R +LE  ++ LR  L+  ++ 
Sbjct: 143 ------------------------------REMQLLRSRRENLEVATASLRQSLALTRRQ 172

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L M + L +  A ++ ++ Q +R   +   +L    ++                     Y
Sbjct: 173 LAMTEPLVDLGAANRVEIIQLQRQENELQAKLDSLRNQ---------------------Y 211

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           + + + +  + +         +        +  ++SP+ G +   +  +     Q    L
Sbjct: 212 VIDANAEYAKTRSELDVIDQVIGGRRDQLNRTRLISPVRGIVKNLEVTTIGGVIQPGGSL 271

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M+IVP      + A+++P+ I  ++ G  ATV+   Y           +++I P   Q +
Sbjct: 272 MEIVPLEDELLVEARISPRDIAFIRPGQPATVKITAYDPSIYGTLDGTVDRISPDTLQDE 331

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
            N + Q YY V ++    +    +     +  G  A V       T+ Q ++ PI     
Sbjct: 332 VNRE-QVYYRVYVRTRHSSLRTKDGREHAIMPGMVANVEIRTGRKTVLQYLLKPINKAKE 390

Query: 436 KIFER 440
            + ER
Sbjct: 391 AMRER 395


>gi|301510593|ref|ZP_07235830.1| Leukotoxin secretion protein D [Acinetobacter baumannii AB058]
          Length = 392

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 140/428 (32%), Gaps = 61/428 (14%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               +  +  IG++    W+    +E   + +G+++       I+S   GI+ K  V+ G
Sbjct: 23  RASLVIWIVGIGLVIFFIWAWFFKLEEVSTGTGKVIPSSKEQVIQSLEGGILTKLNVQEG 82

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L   +       +   +  +   +      ++ +    N   ++     +++
Sbjct: 83  DIVQKGQILAQLDPTRFASNVGESRSLLIAAQATAARLRAEV----NGTPLVFPEIVAQD 138

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L+      + +                             R DLE   S LR  L   
Sbjct: 139 PKLVHEETALYESR----------------------------RADLEQTLSGLRQALQLV 170

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q++L M + L  K A S+                          + R  N+L ++ N   
Sbjct: 171 QQELAMTEPLVAKGAASE-------------------------GLRREANDLQNKMNDAR 205

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y  +   +L +       +   +     + ++    +P+ G +      +      Q+
Sbjct: 206 NQYYVKAREELSKANTDTQTQQQVVMGRNDSLQRAVFKAPVRGVVKEITVTTHGGVIPQN 265

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM IVP  +   I A++ P+ I  ++ G  A V+   Y        K  +  I P   
Sbjct: 266 GKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGLKGKVTVISPDTI 325

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           + +   Q Q YY V ++       +       +  G  A V       T+   ++ P   
Sbjct: 326 RDEV-KQDQFYYRVYIRTDSDKLYNKEGKAFGITPGMVATVDIRTGEKTVLDYLLKPFNK 384

Query: 433 NWPKIFER 440
               + ER
Sbjct: 385 AKEALRER 392


>gi|300940560|ref|ZP_07155129.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 21-1]
 gi|300454682|gb|EFK18175.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 21-1]
          Length = 391

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 66/435 (15%), Positives = 138/435 (31%), Gaps = 59/435 (13%)

Query: 1   MHHFMWKNLKRNHPASLK--RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE 58
           M+  +  N     P  L+      ++ + ++  + W+    ++   + SG +        
Sbjct: 1   MNGQLQYNRGLTEPRLLRSALAVRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQV 60

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           ++S   GI+    V+ G  + QG PL      +T   +     ++  L   + T      
Sbjct: 61  VQSLEGGILYHLDVKVGDIVEQGQPLAQLNRTKTESDVQE---AMSRLYAALATSARLRA 117

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            ++NK  V         E +      Y++                              R
Sbjct: 118 EVSNKPLVFPDELNKFPELIESETALYNT-----------------------------RR 148

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             L   ++ L   +S   ++L M + L ++ A S  ++ + +R                 
Sbjct: 149 DGLNKATTGLTQGISLVNRELAMTQPLVKQGAASSVEVLRLQR----------------- 191

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                 NEL ++ +     Y  +   +L +       + S +   E +  +    +P+ G
Sbjct: 192 ----QANELENKLSDVRTQYYVQAREELAKANAEVETQRSVIRGREDSLTRLNFTAPVRG 247

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +      +          LM IVP  +   I AK++P+ +  +  G  + V+   Y   
Sbjct: 248 IVQDIDVTTVGGVIAPGGKLMTIVPLDEQLLIEAKISPRDVAFIHPGQKSLVKITAYDYS 307

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLF 415
                   +  I P   Q +       YY V ++         S     +  G  A V  
Sbjct: 308 IYGGLPGEVTVISPDTVQDEVRRDV-YYYRVYIRTFSNHLENKSKQQFPIFPGMVATVDI 366

Query: 416 TAKNTTLAQEIIHPI 430
                ++   ++ P 
Sbjct: 367 RTGKKSVLDYLLKPF 381


>gi|288960000|ref|YP_003450340.1| protein secretion protein [Azospirillum sp. B510]
 gi|288912308|dbj|BAI73796.1| protein secretion protein [Azospirillum sp. B510]
          Length = 476

 Score =  269 bits (689), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 62/417 (14%), Positives = 160/417 (38%), Gaps = 12/417 (2%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           +G  G+  W+ + P+  ++S+SG +  E     IK+   G+I    V+ G ++  G  L+
Sbjct: 65  VGFGGMTGWAAVAPLHSAISASGSLAPETGRKVIKNTEGGVISAILVKEGDRVDAGQVLM 124

Query: 86  TFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
             +  E    +++   ++         +  E      +    ++   A  +RE  + + +
Sbjct: 125 RLDSTEAQTRLEMLNAALFDTLASEARLSAELFEKPAIEWPAEL--AARRAREPAVENAM 182

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
               +   K+F    + +    K+   R+ ++      LE + + L   +    +D+ + 
Sbjct: 183 ----TNQEKLFQVRRNQLDTEAKLTQDRIATLGDEVHSLEKQRAFLAREIKLSDEDIQIT 238

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + L ++   ++  L   ++   +   +  E         +   +   +     +++ +++
Sbjct: 239 QGLLDRGNSTRTKLVAAQKENAQLHAQDHELEARMSQSRQQAVDAQGDLVRRRSDFREKV 298

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
             +L++ +        ++       + +TI +P  G +V     +       ++P++ IV
Sbjct: 299 LVELDKARGDAQKLAEQIRDARNRLDNRTIRAPDTGDVVMYGHPTVGGTITANEPVLDIV 358

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P  K      ++ PK I+ +       V+   Y           +  +     +  +N  
Sbjct: 359 PDDKALLAEVRIQPKDIKSMAVDLPVKVQLTAYDSRVVGTIDGTVSYVSAD--RLTDNAT 416

Query: 383 TQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            Q+YY   +++ D    +  N++++ G P E        T    +I P+  ++ K F
Sbjct: 417 RQDYYLARIRLKDADSHEVRNLKIKAGMPVEARIVLSARTPLDYLIQPLRQSYVKAF 473


>gi|313201740|ref|YP_004040398.1| HlyD family type I secretion membrane fusion protein [Methylovorus
           sp. MP688]
 gi|312441056|gb|ADQ85162.1| type I secretion membrane fusion protein, HlyD family [Methylovorus
           sp. MP688]
          Length = 439

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 55/420 (13%), Positives = 143/420 (34%), Gaps = 16/420 (3%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +   +L  + ++ LI W+   P+ + V + G ++   +   ++    G++    V  G  
Sbjct: 30  RHWVVLITVMVVLLIVWAAWAPVRMVVRAEGRVIPSTHSQVVQHLEGGVVLSIDVAEGEF 89

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L    D++    +  ++V  + L   +   K+              A ++   +
Sbjct: 90  VQKGDVLARISDVQGASQMGERRVREQALLARVLRLKAEASGSAIADFHALDASDAIRAE 149

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                        + F      + +  ++   ++       ++L  + S L A L   Q+
Sbjct: 150 ------------REAFLARRQRLEQDQRVTTEQVAQKRSELVELMARRSNLAAELELAQR 197

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
              +   + ++ A S+ ++   +  V +    L +       +   I E    +    + 
Sbjct: 198 QQQISNEMMQREAASKLEVLDAQAKVQRLRTMLSDADTSLPRLKAAIAEAEGRSRELESR 257

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  E   DL   Q        +L       E+  + +P++G +      +     +    
Sbjct: 258 FRAEARTDLTAAQTDLQRVQEELKASSDRVERTELRAPVSGIVNRVNVTTIGGVIRPGDA 317

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +++I P  +   + A+V P     +  G    VR   Y        +  + ++       
Sbjct: 318 VVEITPSDEHIVVEARVRPADRAELHPGLPVYVRLSAYDYASFGTTQGRLTEVSADTMPD 377

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           +   + + +Y V + +     +     +  G  A       + T+   +I P+T  + + 
Sbjct: 378 E---KGERFYRVRVGLDGNQRAFAGRPIVPGMVATADIVVGSRTVLAYLISPLT-RFARA 433


>gi|319781732|ref|YP_004141208.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317167620|gb|ADV11158.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 429

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 56/425 (13%), Positives = 138/425 (32%), Gaps = 11/425 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             +   P        +     +  + W+    ++      G+++       I++  +G++
Sbjct: 3   AREDRPPLFASASIFIIGALFVVFVAWASFAEVDEIARGDGKVIPASKTQIIQASEAGVV 62

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           ++  V  G  + +   ++  ++   T  +  ++   + L   I   K       +     
Sbjct: 63  QEIAVTIGQVVKKNDLIIRLDNTLNTSSLGEQQAKARALEVRIARLKYEQAGNLSGPFPC 122

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +  +S   Q+ D   K        F+  +S +   L  +   +        + E  S  
Sbjct: 123 PQDIQSVAPQICDNEQKLLIARRGNFDNKLSVLKSRLDQREKEL-------AEAEANSDR 175

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L   L    ++  ++  + +K  +++ +  + ER   +   +L       K +   I E 
Sbjct: 176 LSKNLVVSDQEAKLVDAMVKKGLMARTEQLRVEREQTELNGQLNLAGETIKKIKSSITEA 235

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +         +E   DL Q     +     +        +  I SP+ G +   +  +
Sbjct: 236 QLQVEELGLQLQQEALDDLTQALADLSVVDETIRGATDKVARTDIRSPVDGIVNTLELNT 295

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              + Q    +  IVP S+   + A+V+P+ +  ++    A ++   Y        +  +
Sbjct: 296 VGAFVQPGAVVAGIVPTSETLLVEARVSPRDVAFIRPDQEALIKVTAYDFSIFGGIEGKV 355

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQE 425
             I             + YY+V +         +     +  G    V       T+   
Sbjct: 356 SNITADSLVDQKT--GEPYYQVRVATDKSTLQRDGKAYSIIPGMICSVDIKTGRKTILHY 413

Query: 426 IIHPI 430
           ++ PI
Sbjct: 414 LLKPI 418


>gi|83953020|ref|ZP_00961742.1| putative toxin secretion transmembrane protein [Sulfitobacter sp.
           NAS-14.1]
 gi|83841988|gb|EAP81156.1| putative toxin secretion transmembrane protein [Sulfitobacter sp.
           NAS-14.1]
          Length = 418

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 67/424 (15%), Positives = 142/424 (33%), Gaps = 13/424 (3%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
                     L  W+    I  +V ++G+I        I++   G++ +  V+NG  +  
Sbjct: 1   MAAMFCLFALLGGWAATTQISGAVIATGQIDVAGKPKVIQTVDGGVLAELPVQNGDIVKA 60

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           G  L  F+       + + +  +     LR  ++ E+            L     + +  
Sbjct: 61  GQVLARFDATILQIDLRMARARLAEAAGLRARLEAERDESPAPRFDAIDLPAKIGALD-- 118

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
               + +  +  + +F               + +  +      L  + S L   L+    
Sbjct: 119 ----MTQAQAGQAAIFEARAQMRAGMRARMASDLADVETQATGLNGQISALEQQLAILTT 174

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +L  +  L EK    Q  L+Q +        +L     +   ++     L  E+      
Sbjct: 175 ELRSLTRLVEKGLAPQVRLSQLQSTRAGLRGDLAARRADLARLIHQRWTLKLESLQADRR 234

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           + ++++  L +      +    +   +   ++  I +P+ G +   ++ +          
Sbjct: 235 FQEQVALQLREVTAEVQELTLSILTRQAQLDRIAIRAPVDGMVHELRATTVGAVVGAGAT 294

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP         +V P+ I  V+    AT+    +      +    +  I P +   
Sbjct: 295 LMDIVPQQSKFEFEVQVDPRSINLVRYDQPATLVLTAFDPHTTPQLTGSVYSISPQVVVD 354

Query: 378 DNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             N     +Y VIL I  T+L     ++ L  G P E     K+ T+   +  PI+    
Sbjct: 355 PRN--GDSFYRVILDIPRTELDRLPTSVRLVPGMPIEAFLKTKDRTVLSYLAEPISSQLR 412

Query: 436 KIFE 439
           + F 
Sbjct: 413 RGFR 416


>gi|331672028|ref|ZP_08372824.1| membrane spanning export protein [Escherichia coli TA280]
 gi|331071017|gb|EGI42376.1| membrane spanning export protein [Escherichia coli TA280]
          Length = 391

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 63/427 (14%), Positives = 133/427 (31%), Gaps = 57/427 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + L             ++ + ++  + W+    ++   + SG +        ++S   GI
Sbjct: 9   RGLTEPRLPRSALAVRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQVVQSLEGGI 68

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+ G  + QG PL      +T   +     ++  L   + T       ++NK  V
Sbjct: 69  LYHLNVKVGDIVEQGQPLAQLNRTKTESDVQE---AMSRLYAALATSARLRAEVSNKPLV 125

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                    E +      Y++                              R  L   ++
Sbjct: 126 FPDELNKFPELIESETALYNT-----------------------------RRDGLNKATT 156

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L   +S   ++L M + L ++ A S  ++ + +R                       NE
Sbjct: 157 GLTQGISLVNRELAMTQPLVKQGAASSVEVLRLQR---------------------QANE 195

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L ++ +     Y  +   +L +       + S +   E +  +    +P+ G +      
Sbjct: 196 LENKLSDVRTQYYVQAREELAKANAEVETQRSVIRGREDSLTRLNFTAPVRGIVQDIDVT 255

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +          LM IVP  +   I AK++P+ +  +  G  + V+   Y           
Sbjct: 256 TVGGVIAPGGKLMTIVPLDEQLLIEAKISPRDVAFIHPGQKSLVKITAYDYSIYGGLPGE 315

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           +  I P   Q +       YY V ++         S     +  G  A V       ++ 
Sbjct: 316 VAVISPDTVQDEVRRDV-YYYRVYIRTFSNHLENKSKQQFPIFPGMVATVDIRTGKKSVL 374

Query: 424 QEIIHPI 430
             ++ P 
Sbjct: 375 DYLLKPF 381


>gi|260462596|ref|ZP_05810802.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium opportunistum WSM2075]
 gi|259031502|gb|EEW32772.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium opportunistum WSM2075]
          Length = 429

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 55/425 (12%), Positives = 138/425 (32%), Gaps = 11/425 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             +   P        +     +  + W+    ++      G+++       I++   G++
Sbjct: 3   AREDRPPFFASASIFIIGALFVAFVAWASFAEVDEIARGDGKVIPASKTQIIQASEPGVV 62

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           ++  V+ G  + +   ++  ++   T  +  ++   + L   I   K             
Sbjct: 63  QEIAVKIGQVVKKNDLIIRLDNTLNTSSLGEQQAKARALEVRIARLKYEQSGNLTGSFPC 122

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
               ++   Q+ D   K      + F+  +S +   L  +   +             S  
Sbjct: 123 PDDIQAAAPQICDNEQKLLIARRENFDNKLSVLKSRLDQREKELDQAM-------ADSDR 175

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L   L+   ++  +++ + +K  +++ +  + ER   +   +L       K     I E 
Sbjct: 176 LTKNLAISDQETKLVEAMVKKGLMARTEQIRVEREQTELHGQLNLAGETIKKAKSAITEA 235

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +         +E   DL Q     +     +        +  I SP+ G +   +  +
Sbjct: 236 QLQVEELGLQLQQEALIDLTQALADLSVVDETIRGATDKVARTDIRSPVDGIVNTLEFNT 295

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              + Q    +  IVP S+   + A+V+P+ +  ++    A ++   Y        +  +
Sbjct: 296 VGAFVQPGVIVAGIVPTSETLLVEARVSPRDVAFIRPDQEALIKVTAYDFSIFGGIEGKV 355

Query: 368 EKIDPIISQQDNNLQTQEYYEVIL--KITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
             I             + YY+V +  + + L        +  G    V       T+   
Sbjct: 356 SNITADSLVDQKT--GEPYYQVRVATETSTLERDGKAYSIIPGMICSVDIKTGRKTILTY 413

Query: 426 IIHPI 430
           ++ PI
Sbjct: 414 LLKPI 418


>gi|293408639|ref|ZP_06652478.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471817|gb|EFF14300.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 391

 Score =  269 bits (688), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 61/427 (14%), Positives = 131/427 (30%), Gaps = 57/427 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + L             ++ + ++  + W+    ++   + SG +        ++S   GI
Sbjct: 9   RGLTEPRLPRSALAVRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQVVQSLEGGI 68

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+ G  + QG PL      +T   +     ++  L   + T       ++NK  V
Sbjct: 69  LYHLDVKVGDIVEQGQPLAQLNRTKTESDVQE---AMSRLYAALATSARLRAEVSNKPLV 125

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                    E +      Y++                              R  L   ++
Sbjct: 126 FPDELNKFPELIESETALYNT-----------------------------RRDGLNKATT 156

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L   +S   ++L M + L ++ A S  ++ + +R   +   +L E              
Sbjct: 157 GLTQGISLVNRELAMTQPLVKQGAASSVEVLRLQRQANELENKLSEV------------- 203

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                      Y  +   +L +       + S +   E +  +    +P+ G +      
Sbjct: 204 --------RTQYYVQAREELAKANAEVETQRSVIRGREDSLTRLNFTAPVRGIVQDIDVT 255

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +          LM IVP  +   I AK++P+ +  +  G  + V+   Y           
Sbjct: 256 TVGGVIAPGGKLMTIVPLDEQLLIEAKISPRDVAFIHPGQKSLVKITAYDYSIYGGLPGE 315

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLA 423
           +  I P   Q +       YY V ++       +       +  G  A V       ++ 
Sbjct: 316 VAVISPDTVQDEVRRDV-YYYRVYIRTFSNHLENKHKQQFPIFPGMVATVDIRTGKKSVL 374

Query: 424 QEIIHPI 430
             ++ P 
Sbjct: 375 DYLLKPF 381


>gi|299770833|ref|YP_003732859.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter sp. DR1]
 gi|298700921|gb|ADI91486.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter sp. DR1]
          Length = 398

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 143/428 (33%), Gaps = 57/428 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               +  +  IG++    W+ +  +E   + +G+++       I+S   GI+ K  V+ G
Sbjct: 25  RASLVIWIVGIGLVIFFIWAWVFKLEEVSTGTGKVIPSSKEQVIQSLEGGILTKLNVQEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L   +       +   +  + + +      ++ +    N   ++      +E
Sbjct: 85  DIVQKGEILAQLDPTRFASNVGESRSLLISAQATAARLRAEV----NGTPLVFPEIVMKE 140

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L+      + +                             R DLE   S L+  L   
Sbjct: 141 PKLVLEETALYRSR----------------------------RADLEQTLSGLKQALQLV 172

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q++L M + L  K A S+ ++ +  R                       N+L ++ N   
Sbjct: 173 QQELAMTEPLVAKGAASEVEVLRLRREA---------------------NDLRNKMNDAQ 211

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y  +   +L +       +   +     + ++    +P+ G +      +      Q+
Sbjct: 212 NQYYVKAREELSKANTDSETQQQIVLGRSDSLDRAVFKAPVRGVVKEIAVTTHGGVIPQN 271

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM IVP  +   I A++ P+ I  ++ G  A V+   Y        K  +  I P   
Sbjct: 272 GKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGLKGKVTVISPDTI 331

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           + +   Q Q YY V ++       +       +  G  A V       T+   ++ P   
Sbjct: 332 RDEV-KQDQFYYRVYIRTDSDKLYNKEGKAFGITPGMVATVDIRTGEKTVLDYLLKPFNK 390

Query: 433 NWPKIFER 440
               + ER
Sbjct: 391 AKEALRER 398


>gi|261822560|ref|YP_003260666.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium wasabiae WPP163]
 gi|261606573|gb|ACX89059.1| type I secretion membrane fusion protein, HlyD family
           [Pectobacterium wasabiae WPP163]
          Length = 389

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 71/426 (16%), Positives = 144/426 (33%), Gaps = 63/426 (14%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R     +  +  LS++G++    W+    ++     +G++        I+S   GII + 
Sbjct: 11  RRQGRRVSVIIWLSLLGLVVFFVWAKFAVLDEVSVGTGKVTPSTRAQVIESLDGGIIGQL 70

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVL 127
            V+ G+ + +G  L   +      +       ++ LR     +  E S      +   + 
Sbjct: 71  YVQQGNVVEKGQVLAQLDINRFQSVYGEAFSRVQTLRASAERLYAELSGEPLKFSAETMK 130

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E A  +RE QL +   +                                         + 
Sbjct: 131 EPALAARERQLYESRLRNRDET-----------------------------------IAN 155

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L+  +   +++L M + L ++ A S  ++ +  R +     E+R  I E  N        
Sbjct: 156 LQQSMRLVEQELRMTEPLVQRGAASAVEVIRLRRQIS----EIRGKIDEASN-------- 203

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                     Y      +  +N      +   ++      ++ TI SP+ G +   Q  +
Sbjct: 204 ---------QYAVRAREEQVKNNADLEAQREVVSGKADQLKRATITSPVRGIVKDIQVTT 254

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q    LM+IVP      I  ++ P+ I +++ G  ATV+   Y           +
Sbjct: 255 VGGVLQPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKITAYDSSIYGNLTGEV 314

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQ 424
           E + P   Q +   + Q YY V ++ T       +     +  G  A V       ++  
Sbjct: 315 ESVSPDTLQDEV-RRDQFYYRVYVRTTQAELTNKAGEKFPIVPGMVASVEIRTGQKSVLD 373

Query: 425 EIIHPI 430
            ++ P+
Sbjct: 374 YLVKPL 379


>gi|325295502|ref|YP_004282016.1| type I secretion membrane fusion protein, HlyD family
           [Desulfurobacterium thermolithotrophum DSM 11699]
 gi|325065950|gb|ADY73957.1| type I secretion membrane fusion protein, HlyD family
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 457

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 80/431 (18%), Positives = 171/431 (39%), Gaps = 15/431 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +   +L+  +    LI W+ L  I+  V + G+++ +     ++    G + +  V+ 
Sbjct: 34  KYITFGSLVVFLIFGLLIGWAALAKIDTVVVAPGKVVVKSYKKPVQHKDWGTVTRIFVKE 93

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAF 131
           G  + +G PLL  E +E      + + +  NL   R  + +EK  L+ +    + L+   
Sbjct: 94  GDFVKKGDPLLELEKLEQDTNYKVLESNYYNLLAERDRLLSEKKGLNHIAFSSEFLQFKN 153

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +  +EQ++        T  ++F      +   L +   R          L++   +   L
Sbjct: 154 KKLKEQII-------RTQRELFFKRKRKLQSELAVLSERENQAKEQLKGLKSVLKIKENL 206

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+S+ K++   + L ++  VS+  L    +   +   E+++   +   +L  I EL  + 
Sbjct: 207 LNSYIKEIKEQEELVKEKLVSKIRLLDLMKEKERLEAEIKDIKSKIPQVLSQIEELNHQK 266

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            L+  NY  E++  L++     ++   K+   ++  ++  I +  +G ++  +  +    
Sbjct: 267 TLQIENYQNEVASKLDEVLSKLSELKPKVIYAKEKVKKTIITANTSGQVLGLKIHAKGEV 326

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +    LM IVP     +I AKV P+    V KG    + FP +  I     +  +  + 
Sbjct: 327 VKPGDTLMYIVPKKDEIFILAKVLPQDRDRVSKGQLVDLHFPAFLSIAANIVEGKVTYVA 386

Query: 372 PIISQQDNNLQTQEYYEVILKITDLA---FSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                  +     +YYE  + +TD            L  G PA      +  T  + ++ 
Sbjct: 387 TDTL--FDQATRHDYYETHIVLTDKGKEQLKKYGFNLVPGMPAVAYIKVEKVTPLEYVLQ 444

Query: 429 PITDNWPKIFE 439
           P+       F+
Sbjct: 445 PVLMLVKTAFK 455


>gi|23013550|ref|ZP_00053432.1| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 468

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 63/424 (14%), Positives = 153/424 (36%), Gaps = 16/424 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++   LL+       + W+    +    ++ G+++    V  ++    GI+++    +G 
Sbjct: 56  VRFTMLLASATTAAFVIWAAFTDVPEIATAEGQVIPSGQVQAVQHLEGGIVQEIVAHDGD 115

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G P++     +    ++  +     L    +  ++  +     +  + K ++    
Sbjct: 116 LVEAGAPIVRLNPAQAISDLEQTRAREATLLIKAERLRALAEERQPDFSQMPKGYD---- 171

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +  +    +FN    +   S  + L++M     +   LE++   LR  L   Q
Sbjct: 172 -------RLIADNMAIFNSQSQARDTSRSVILSQMEQKRSDLRLLESQERSLREQLGPLQ 224

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +++TM + L  K  VS+      +R + +   EL   + ++       +E+ +      +
Sbjct: 225 EEMTMRQELVAKGLVSRVVFLDTKRELSRVQGELARLVGQEVTAREAYSEVENRLMDNKS 284

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           +  K    DL       A     +  LE    +  I++P+ G +      +     Q   
Sbjct: 285 SLQKATMDDLGTTVNELAQVQESIGRLEDRVARLDIVAPVRGLVKGLMVKNQGAVIQAGG 344

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            + ++VP      + AK+  K + H+K G    V+   Y   R       + KI      
Sbjct: 345 NVCEVVPVDTQMKVDAKINTKDVGHLKIGQPVRVKVTTYDFARYGAVDGTLSKISASSFA 404

Query: 377 QDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            +   +   +++ ++ +    +  +     ++ G          + TL Q ++ PI    
Sbjct: 405 DE---KGNPFFKGVIDLKHNYVGAAAGRYGIQPGMSVTAEIITGDKTLLQYMLKPIFTQI 461

Query: 435 PKIF 438
            + F
Sbjct: 462 QQSF 465


>gi|218547941|ref|YP_002381732.1| RtxD/HlyD/CyaD protein of type I secretion system [Escherichia
           fergusonii ATCC 35469]
 gi|218355482|emb|CAQ88091.1| RtxD/HlyD/CyaD protein of type I secretion system [Escherichia
           fergusonii ATCC 35469]
 gi|323965179|gb|EGB60638.1| HlyD type I secretion membrane fusion protein [Escherichia coli
           M863]
 gi|323976020|gb|EGB71113.1| HlyD type I secretion membrane fusion protein [Escherichia coli
           TW10509]
 gi|327254819|gb|EGE66435.1| type I secretion membrane fusion protein, HlyD family protein
           [Escherichia coli STEC_7v]
          Length = 391

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 62/427 (14%), Positives = 133/427 (31%), Gaps = 57/427 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + L             ++ + ++  + W+    ++   + SG +        ++S   GI
Sbjct: 9   RGLTEPRLPRSALAVRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQVVQSLEGGI 68

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+ G  + QG PL      +T   +     ++  L   + T       ++NK  V
Sbjct: 69  LYHLDVKVGDIVEQGQPLAQLNRTKTESDVQE---AMSRLYAALATSARLRAEVSNKPLV 125

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                    E +      Y++                              R  L   ++
Sbjct: 126 FPDELNKFPELIESETALYNT-----------------------------RRDGLNKATT 156

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L   +S   ++L M + L ++ A S  ++ + +R                       NE
Sbjct: 157 GLTQGISLVNRELAMTQPLVKQGAASSVEVLRLQR---------------------QANE 195

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L ++ +     Y  +   +L +       + S +   E +  +    +P+ G +      
Sbjct: 196 LENKLSDVRTQYYVQAREELAKANAEVETQRSVIRGREDSLTRLNFTAPVRGIVQDIDVT 255

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +          LM IVP  +   I AK++P+ +  +  G  + V+   Y           
Sbjct: 256 TVGGVIAPGGKLMTIVPLDEQLLIEAKISPRDVAFIHPGQKSLVKITAYDYSIYGGLPGE 315

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLA 423
           +  I P   Q +       YY V ++       +       +  G  A V       ++ 
Sbjct: 316 VAVISPDTVQDEVRRDV-YYYRVYIRTFSNHLENKHKQQFPIFPGMVATVDIRTGKKSVL 374

Query: 424 QEIIHPI 430
             ++ P 
Sbjct: 375 DYLLKPF 381


>gi|85705241|ref|ZP_01036340.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Roseovarius sp. 217]
 gi|85670114|gb|EAQ24976.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Roseovarius sp. 217]
          Length = 399

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 65/420 (15%), Positives = 146/420 (34%), Gaps = 55/420 (13%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
             M  L    +   I W+    I+  V + G  ++      I++   GI+ +  V+ G  
Sbjct: 24  SLMVWLCAASVWIFILWAAFAWIDEIVRAPGAFISTSRPQIIQNLEGGILAELLVQEGDV 83

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L    D      +   +  I  L       ++ L                    
Sbjct: 84  VARGDVLARLHDTRFNSEVADLQDQIAGLEVRQLRLEAELA------------------- 124

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                G++     +        +  S +  L         + D    S   + ++    +
Sbjct: 125 -----GQFDFAVPEAVVTRAGEMVASERALLK------ARQEDFVKSSEGAKRVMQQSAE 173

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +  +++ L  K  V+  ++ +  +    +               +  +E+  +A LE A 
Sbjct: 174 EKRLLEGLLAKKIVALIEVTRARKAHADAE--------------KRYDEIVTQAELERAE 219

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
              E  ++L       A     L   +    +  +LSP+ G +      +     +  + 
Sbjct: 220 AYSETLKEL-------ATLRQTLRASQDQLNRTVLLSPLRGVVNNLSVTTIGGVVRPGEE 272

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +++I+P  +  ++ A+V P+ I ++++G  AT++   Y        K  ++ I     + 
Sbjct: 273 ILEIIPLDEEMFVEARVEPRNIANIRRGQEATIKLTAYDYTIYGTLKGRVDFISADTFKD 332

Query: 378 D--NNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           +   +     +Y+V L++   A       IE+R G  AEV       T+ Q ++ P+  +
Sbjct: 333 ERARDPDGDPHYKVTLRVDMGALTPRQAGIEIRPGMQAEVELHTGEKTVLQYLLKPLYKS 392


>gi|329849591|ref|ZP_08264437.1| protease secretion protein prtE [Asticcacaulis biprosthecum C19]
 gi|328841502|gb|EGF91072.1| protease secretion protein prtE [Asticcacaulis biprosthecum C19]
          Length = 432

 Score =  269 bits (687), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 73/431 (16%), Positives = 151/431 (35%), Gaps = 8/431 (1%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
              K +HP + +   L+ +  +  LI W  L P+   V +SG +  ++N   ++    GI
Sbjct: 4   AAEKLSHPRT-RLYGLICLGALGLLIVWGFLAPLAEGVVASGNLSVDNNRKAVQHLEGGI 62

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++   V  GS + +G  +L  +DI      D     +  L       +S L        V
Sbjct: 63  VRAVAVREGSTVKEGDVILELDDINARAQRDQAAQDVAALLLAQARLESFLAGQPQIRFV 122

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
              A         D           VF      +  S  +  +R  ++  N      + +
Sbjct: 123 DVTALRLDPGVEADLRR----HQQDVFVQQTRWLSASAGLIRSRQGAVLSNSASKAAQIA 178

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +   L++ + +LT+ ++L EK  V  + +    + V     +L     E+         
Sbjct: 179 AMEDGLAAARSELTLAESLLEKRLVRLDHVQGLRQRVAAQEADLARLKAEKTQGGVDAAV 238

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              E     A   ++ S +L + +        +L   E    +  + +P +GT++   + 
Sbjct: 239 YDMELAESRAMVFRDASNELVKVKTDLLSTQERLAAAEGVFARSLVRAPRSGTVLNLAAT 298

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q  + LM+IVP ++      +VTP     + +G    V+   +      +    
Sbjct: 299 TVGGVVQPGETLMEIVPDNEKLIATVRVTPNDRDSIYEGQDVKVQITAFQSWLTPRLSGK 358

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN-TTLAQE 425
           +  +   +  +        YYE  + +         + +R G P E   ++    T    
Sbjct: 359 LMGVSADL--KTVKETGASYYEARIILNGEDVKQKGLRIRAGMPVEAFISSGQTRTAFDY 416

Query: 426 IIHPITDNWPK 436
           +  P+     +
Sbjct: 417 LFEPLLQVLRR 427


>gi|330819187|ref|YP_004348049.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           gladioli BSR3]
 gi|327371182|gb|AEA62537.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           gladioli BSR3]
          Length = 414

 Score =  269 bits (687), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 60/433 (13%), Positives = 137/433 (31%), Gaps = 58/433 (13%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            M   L        K M  +    ++  + W+    +E        +++      I+S  
Sbjct: 26  DMRAALLTQSSPGSKLMLYVVATLLVAFLAWARFARVEEITQGEATVISRSREQVIQSLE 85

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI+++  V  G  + +G  LL  +                 L+  +   ++        
Sbjct: 86  GGILEEMNVREGDIVRKGQMLLKIDPTRAQTSYREAYSKAVGLKATLARLRAEA----FS 141

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             ++       E +++    K +++     +  I+++ RS                    
Sbjct: 142 QPLVFPPAVRDETEVVQMETKAYNSRRHALDESIAALERS-------------------- 181

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                    +  QK++ + + L  K  +S  +L + +R                      
Sbjct: 182 --------YALQQKEIELAEPLAAKGLMSDVELLRMKRTA-------------------- 213

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            NEL  +       Y  + + +L + +   A     L        + ++++P+ GT+   
Sbjct: 214 -NELKSQMVERRNRYQADANSELTKLELELAQTNESLVGRRDVLSRTSVVAPVYGTVKNV 272

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +     Q  + +++IVP      +  K+ P  +  ++ G  A V+   Y        
Sbjct: 273 RVNTIGGVIQPGEHILEIVPLEDQLLVEGKIKPSDVAFLRPGQPAMVKITAYDFGIYGGL 332

Query: 364 KAIIEKIDPII---SQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAK 418
           K  +  I P       +    +   +Y V +      L     ++ +  G  A V     
Sbjct: 333 KGKVNYISPDTLKDDAKAAAGKDATFYRVQVLTDRAYLEAGGKHLPIMPGMIARVEIRTG 392

Query: 419 NTTLAQEIIHPIT 431
             T+   ++ PI 
Sbjct: 393 EKTILDFLLKPIF 405


>gi|212702897|ref|ZP_03311025.1| hypothetical protein DESPIG_00930 [Desulfovibrio piger ATCC 29098]
 gi|212673759|gb|EEB34242.1| hypothetical protein DESPIG_00930 [Desulfovibrio piger ATCC 29098]
          Length = 557

 Score =  269 bits (687), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 56/401 (13%), Positives = 129/401 (32%), Gaps = 11/401 (2%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           PI+    + G ++       + +   GI++   V  G  + +G  +   E++        
Sbjct: 150 PIDEVTHAEGSVVGSRRTQSVSNLEGGILQGVLVREGEIVEKGQVVAQLENVMAESSYRD 209

Query: 99  KKVSIKNLRCHIDTEKSAL--DFLNNKYDVL----EKAFESREEQLLDFLGKYHSTCSKV 152
               +   R  I   ++ L  +      D+     E   E  +  L++   +        
Sbjct: 210 ALYKVVEHRLAIMRLEAMLRDEEPVFPSDLPSFLKEILGEEPDSALVERARQIVDDQRNT 269

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +    S +   L M   +         +   +   L   L    +     K L ++N  S
Sbjct: 270 WKAQSSKLQAELSMLEAQYAQRQSEVAEQMARKKQLDGSLVLETEQRDTAKRLLQRNNYS 329

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + D    E+ + ++  E+             ++E         A     IS+++ + +  
Sbjct: 330 RMDYLGLEQKIIQTQGEIDMLAAAIPKTQAMMDEARQRIGSRVAEEQLAISQEINKRRTE 389

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                  LT       +  + SP+ G++      +     +  + +M IVP  +   +  
Sbjct: 390 LGSVRESLTAGGDRVTRTEVRSPVRGSVKQILVNTVGGVVKPGEAIMDIVPMDESLLVEV 449

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +V P+ +  ++ G    ++   Y           +E I     +     +   YY V ++
Sbjct: 450 RVRPQDVAFLRPGQDVMIKVSAYDFSIYGGLPGKLESISADTIED---KKGDFYYLVKVR 506

Query: 393 ITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             + A   N+  + +  G            T+   I+ P+ 
Sbjct: 507 TGETAIRHNDEILPIIPGMIVVADIIIGKKTVLDYILKPVM 547


>gi|319944327|ref|ZP_08018601.1| HlyD family type I secretion membrane fusion protein [Lautropia
           mirabilis ATCC 51599]
 gi|319742288|gb|EFV94701.1| HlyD family type I secretion membrane fusion protein [Lautropia
           mirabilis ATCC 51599]
          Length = 440

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 66/416 (15%), Positives = 139/416 (33%), Gaps = 62/416 (14%)

Query: 30  GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
               W+    +E        I+       I+S   GI+ +  V  G+ + +G PLL  ++
Sbjct: 79  SAAIWAHYSKLEEITKGDARIIASSREQVIQSLEGGILAEMLVREGATVEKGQPLLRIDE 138

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +           + +L+      ++      L    DVL  A      +++D     ++
Sbjct: 139 TKARSSYKEGLSKVISLKASAARLRAEARGTPLKFPEDVLADA------EVVDNETDTYN 192

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                                         R  L+   +  +A  +   +++ + K +  
Sbjct: 193 AR----------------------------RDSLQQAIATSKASQALIGREINITKPMVA 224

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           K  V++ +L + +R        ++E I+                      Y  + + DL 
Sbjct: 225 KGLVAETELLRLQRQYNDLQAAMQERIN---------------------KYRVDAANDLS 263

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +   A     LT  +    +  + +P+ G +   +  +     Q  Q +M+I+P    
Sbjct: 264 RVEAELAQVQEALTARQDQVTRTVLTAPVHGIVKNIRMNTRGGVIQPGQDIMEIIPLEDQ 323

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--SQQDNNLQTQE 385
             + AK+ P ++  ++ G  ATV+   Y           +E I P      +  +     
Sbjct: 324 LLVEAKIRPHEVAFLRPGLPATVKISAYDYAIYGGLHGKVELISPDTLRDDEQRSAGNDR 383

Query: 386 YYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           YY V+++ T         ++ +  G  A V       T+   I+ PI     + F 
Sbjct: 384 YYRVLVRTTSSTLHAGGKDLPIIPGMTAAVEIRTGEKTVMDYILKPILK-MREAFR 438


>gi|15800220|ref|NP_286232.1| putative membrane spanning export protein [Escherichia coli O157:H7
           EDL933]
 gi|15829798|ref|NP_308571.1| membrane fusion protein of a transport system [Escherichia coli
           O157:H7 str. Sakai]
 gi|168747832|ref|ZP_02772854.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|168754597|ref|ZP_02779604.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|168760352|ref|ZP_02785359.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|168768447|ref|ZP_02793454.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|168774559|ref|ZP_02799566.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|168778986|ref|ZP_02803993.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786344|ref|ZP_02811351.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC869]
 gi|168798057|ref|ZP_02823064.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC508]
 gi|195936055|ref|ZP_03081437.1| putative membrane fusion protein of a transport system [Escherichia
           coli O157:H7 str. EC4024]
 gi|208808611|ref|ZP_03250948.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208814831|ref|ZP_03256010.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208823280|ref|ZP_03263598.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209399564|ref|YP_002269141.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217326344|ref|ZP_03442428.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|218703773|ref|YP_002411292.1| RtxD/HlyD/CyaD protein of type I secretion system [Escherichia coli
           UMN026]
 gi|254791674|ref|YP_003076511.1| putative membrane spanning export protein [Escherichia coli O157:H7
           str. TW14359]
 gi|261223974|ref|ZP_05938255.1| putative membrane spanning export protein [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261256312|ref|ZP_05948845.1| putative membrane spanning export protein [Escherichia coli O157:H7
           str. FRIK966]
 gi|291281396|ref|YP_003498214.1| Membrane spanning export protein [Escherichia coli O55:H7 str.
           CB9615]
 gi|293403611|ref|ZP_06647702.1| type I secretion membrane fusion protein [Escherichia coli
           FVEC1412]
 gi|293413744|ref|ZP_06656393.1| membrane spanning export protein [Escherichia coli B185]
 gi|298379221|ref|ZP_06989102.1| membrane spanning export protein [Escherichia coli FVEC1302]
 gi|300900569|ref|ZP_07118733.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 198-1]
 gi|301020392|ref|ZP_07184496.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 69-1]
 gi|331651433|ref|ZP_08352458.1| membrane spanning export protein [Escherichia coli M718]
 gi|331661875|ref|ZP_08362798.1| membrane spanning export protein [Escherichia coli TA143]
 gi|12513370|gb|AAG54840.1|AE005229_3 putative membrane spanning export protein [Escherichia coli O157:H7
           str. EDL933]
 gi|13360002|dbj|BAB33967.1| putative membrane fusion protein of a transport system [Escherichia
           coli O157:H7 str. Sakai]
 gi|187769783|gb|EDU33627.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188017578|gb|EDU55700.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189003136|gb|EDU72122.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358041|gb|EDU76460.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189362346|gb|EDU80765.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189369046|gb|EDU87462.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|189373675|gb|EDU92091.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189379267|gb|EDU97683.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC508]
 gi|208728412|gb|EDZ78013.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208731479|gb|EDZ80167.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208737473|gb|EDZ85157.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209160964|gb|ACI38397.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|217322565|gb|EEC30989.1| membrane spanning export protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|218430870|emb|CAR11744.1| RtxD/HlyD/CyaD protein of type I secretion system [Escherichia coli
           UMN026]
 gi|254591074|gb|ACT70435.1| putative membrane spanning export protein [Escherichia coli O157:H7
           str. TW14359]
 gi|290761269|gb|ADD55230.1| Membrane spanning export protein [Escherichia coli O55:H7 str.
           CB9615]
 gi|291429464|gb|EFF02484.1| type I secretion membrane fusion protein [Escherichia coli
           FVEC1412]
 gi|291433802|gb|EFF06775.1| membrane spanning export protein [Escherichia coli B185]
 gi|298280334|gb|EFI21838.1| membrane spanning export protein [Escherichia coli FVEC1302]
 gi|300355924|gb|EFJ71794.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 198-1]
 gi|300398780|gb|EFJ82318.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 69-1]
 gi|320192910|gb|EFW67550.1| Putative membrane spanning export protein [Escherichia coli O157:H7
           str. EC1212]
 gi|320638323|gb|EFX08043.1| Membrane spanning export protein [Escherichia coli O157:H7 str.
           G5101]
 gi|320643864|gb|EFX12987.1| Membrane spanning export protein [Escherichia coli O157:H- str.
           493-89]
 gi|320649215|gb|EFX17793.1| Membrane spanning export protein [Escherichia coli O157:H- str. H
           2687]
 gi|320655153|gb|EFX23105.1| Membrane spanning export protein [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661258|gb|EFX28689.1| Membrane spanning export protein [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320665235|gb|EFX32328.1| Membrane spanning export protein [Escherichia coli O157:H7 str.
           LSU-61]
 gi|324113057|gb|EGC07033.1| HlyD type I secretion membrane fusion protein [Escherichia
           fergusonii B253]
 gi|325496386|gb|EGC94245.1| putative membrane spanning export protein [Escherichia fergusonii
           ECD227]
 gi|326341258|gb|EGD65050.1| Putative membrane spanning export protein [Escherichia coli O157:H7
           str. 1044]
 gi|326345966|gb|EGD69705.1| Putative membrane spanning export protein [Escherichia coli O157:H7
           str. 1125]
 gi|331051174|gb|EGI23226.1| membrane spanning export protein [Escherichia coli M718]
 gi|331060297|gb|EGI32261.1| membrane spanning export protein [Escherichia coli TA143]
          Length = 391

 Score =  268 bits (686), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 63/427 (14%), Positives = 133/427 (31%), Gaps = 57/427 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + L             ++ + ++  + W+    ++   + SG +        ++S   GI
Sbjct: 9   RGLTEPRLPRSALAVRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQVVQSLEGGI 68

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+ G  + QG PL      +T   +     ++  L   + T       ++NK  V
Sbjct: 69  LYHLDVKVGDIVEQGQPLAQLNRTKTESDVQE---AMSRLYAALATSARLRAEVSNKPLV 125

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                    E +      Y++                              R  L   ++
Sbjct: 126 FPDELNKFPELIESETALYNT-----------------------------RRDGLNKATT 156

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L   +S   ++L M + L ++ A S  ++ + +R                       NE
Sbjct: 157 GLTQGISLVNRELAMTQPLVKQGAASSVEVLRLQR---------------------QANE 195

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L ++ +     Y  +   +L +       + S +   E +  +    +P+ G +      
Sbjct: 196 LENKLSDVRTQYYVQAREELAKANAEVETQRSVIRGREDSLTRLNFTAPVRGIVQDIDVT 255

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +          LM IVP  +   I AK++P+ +  +  G  + V+   Y           
Sbjct: 256 TVGGVIAPGGKLMTIVPLDEQLLIEAKISPRDVAFIHPGQKSLVKITAYDYSIYGGLPGE 315

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           +  I P   Q +       YY V ++         S     +  G  A V       ++ 
Sbjct: 316 VAVISPDTVQDEVRRDV-YYYRVYIRTFSNHLENKSKQQFPIFPGMVATVDIRTGKKSVL 374

Query: 424 QEIIHPI 430
             ++ P 
Sbjct: 375 DYLLKPF 381


>gi|154251459|ref|YP_001412283.1| HlyD family type I secretion membrane fusion protein [Parvibaculum
           lavamentivorans DS-1]
 gi|154155409|gb|ABS62626.1| type I secretion membrane fusion protein, HlyD family [Parvibaculum
           lavamentivorans DS-1]
          Length = 439

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 58/434 (13%), Positives = 156/434 (35%), Gaps = 24/434 (5%)

Query: 14  PASLKRMTLLSIIGIIG-----LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           P    +  +L+++G++      L+ WS    I+++ S  G ++   ++  +++   GI++
Sbjct: 16  PVRGPKQAVLTLLGVVAGLFFFLLLWSAFAHIDVTASGEGAVVPSSHIQVVQNLEGGILR 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYD 125
           K  V  G ++ +G  +   ++            + + ++     +  E S    L    D
Sbjct: 76  KVLVREGDRVSEGDVVAQIDNTGALSSYREDLSTFRAMQASAARLSAEASGAP-LAFPVD 134

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +L+           +      +  + ++   +S +  ++ +   +        ++   + 
Sbjct: 135 LLD----------AEESAALIAAETSLYESRMSGLTDAVAVFERQEEQARETIMEATERI 184

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             L     S   + +++        +S  +  + ER++ ++   L +   + +     + 
Sbjct: 185 GHLEDKRRSLAAEHSLVSRQVRDGLMSVVEKLKLERMLAETDEALSKARGDIRAAEIELQ 244

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           EL        + ++ E    L +     A    +L        ++ + +P  G +    +
Sbjct: 245 ELASRIAERRSTFVSEAREQLGRANAEVAALSQRLIAHRDRVGRRDVRAPANGIVKRVAT 304

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +S    +    +M+IVP     +I A++ P  I  +  G  A VR   Y          
Sbjct: 305 LTSGAVIEPGGTIMEIVPLDDTLFIEARMAPADIAFIHAGQEAKVRITAYDFSVYGALPG 364

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLA 423
            +E++           +   Y+ V + +   A  D    + +  G  ++V     + T+ 
Sbjct: 365 RVERVGADT---QMTQEGAHYFPVTVSVDHAALEDRQAELPIIPGMISQVSVITGDRTIL 421

Query: 424 QEIIHPITDNWPKI 437
             ++ P+     + 
Sbjct: 422 GYLLKPVLKLKERA 435


>gi|50120035|ref|YP_049202.1| putative type I secretion protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49610561|emb|CAG74006.1| putative type I secretion protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 389

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 72/422 (17%), Positives = 144/422 (34%), Gaps = 63/422 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +  +  LS++G+I    W+    ++     +G++        I+S   GII +  V+ 
Sbjct: 15  RHVSVIIWLSLLGLIVFFIWAKFAVLDEVSVGTGKVTPSTRAQVIESLDGGIIGQLYVQQ 74

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAF 131
           G+ + +G  L   +      +       ++ LR     +  E S      +   + E A 
Sbjct: 75  GNVVEKGQVLAQLDINRFQSVYGEAFSRVQTLRASAERLHAELSGEPLKFSAETMKEPAL 134

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +RE QL +   +                                         + L+  
Sbjct: 135 ATRERQLYESRLRNRDET-----------------------------------VANLQQS 159

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   +++L M + L ++ A S  ++ +  R +     E+R  I E +N            
Sbjct: 160 MRLVEQELRMTEPLVQRGAASAVEVIRLRRQIT----EIRGKIDEARN------------ 203

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 Y      +  +N      +   ++      ++ TI SP+ G +   Q  +    
Sbjct: 204 -----QYAVRAREEQVKNNADLEAQREVVSGKADQLKRATITSPVRGIVKDIQVTTVGGV 258

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q    LM+IVP      I  ++ P+ I +++ G  ATV+   Y           +E + 
Sbjct: 259 LQPGGKLMEIVPLEDQLLIETRINPRDIAYIRPGLPATVKITAYDSSIYGNLTGEVESVS 318

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           P   Q +   + Q YY V ++ T       +     +  G  A V       ++   +I 
Sbjct: 319 PDTLQDEV-RRDQFYYRVYVRTTLAELTNKAGEKFPIVPGMVASVEIRTGQKSVLDYLIK 377

Query: 429 PI 430
           P+
Sbjct: 378 PL 379


>gi|149188920|ref|ZP_01867210.1| Type I secretion membrane fusion protein, HlyD [Vibrio shilonii
           AK1]
 gi|148837340|gb|EDL54287.1| Type I secretion membrane fusion protein, HlyD [Vibrio shilonii
           AK1]
          Length = 434

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 63/438 (14%), Positives = 157/438 (35%), Gaps = 16/438 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H    ++   +    +    L+ ++  IG+  WS   P+  +  + G+++ E    +++ 
Sbjct: 5   HSETSRSFNLSLTNFILFGWLVLLVCFIGIGYWSYSAPLSSASLAPGKLVTELENQKVQH 64

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALD 118
              G+++   V+ G ++ +G  LL   D      ++    K+  ++     ID E S   
Sbjct: 65  HTGGVVETLLVKEGQRVEKGDLLLVLSDPLLVSQLEQLNQKRFIVQARLARIDAELSG-- 122

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                    E      EE L     +     + + N         +     +M     +R
Sbjct: 123 ---------EALNWGNEENLTPIQSQIRRDQASLLNQNRLIHKEQMMSLRQQMAQSENDR 173

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
              +   S     L+   +++     L EK  VS+    + +R       ++ E+    K
Sbjct: 174 DSYKAWLSSDEHSLTLLNEEIEANSALLEKGYVSKVAFLELKREYSSLVAKIAEHRTRIK 233

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + EL  + +    ++++      ++        + +L       ++  + +P+ G
Sbjct: 234 RTNNKVAELESQMDALKIDFMRTAQEKKQELVSEEQAILKQLKASNTLNDRIEVRAPVGG 293

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++     +       +  +++IVP++        + PK I+ V +G +A +R   Y+  
Sbjct: 294 DVINLVIHTQGGVVAPTSTILEIVPNNTRVVASVNIQPKDIESVYEGLSANIRLTSYSFR 353

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +       +  +       +       +Y+  + +      D  ++L+ G P E     +
Sbjct: 354 QVPAVTGELIHLSADSIVDER--LGGHFYQGKIALDATELLDLGLDLKPGMPVEAQIVLE 411

Query: 419 NTTLAQEIIHPITDNWPK 436
             T+   ++ P+  +  K
Sbjct: 412 ERTVLDYLLSPLIQSMEK 429


>gi|71278693|ref|YP_270974.1| HlyD family type I secretion membrane fusion protein [Colwellia
           psychrerythraea 34H]
 gi|71144433|gb|AAZ24906.1| type I secretion membrane fusion protein, HlyD family [Colwellia
           psychrerythraea 34H]
          Length = 403

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 66/440 (15%), Positives = 153/440 (34%), Gaps = 55/440 (12%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           +      L+  +  +   +    +IG++  + W+    ++     +GE++    V  I+S
Sbjct: 13  NQESTARLESYYLRNYSLVLWGILIGLVVFVLWASNFRLDQVARGTGEVIASSRVQIIQS 72

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G+I    V+ G  + +G  + T +       +      +  LR      ++ +  L 
Sbjct: 73  VDGGVISNLYVKEGDSVTKGQVIATLDTTRIGAAVKEVDARLSALRAKATRLRAEI--LG 130

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           NK  V         EQ+                     V R+L  + +           L
Sbjct: 131 NKTLVFADDLLRFPEQI--------------------KVERALFEQKS---------TTL 161

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
             +   L+  +   +++  ++K L     V++ ++ +  R +  S  +L           
Sbjct: 162 AEELKALKKGVDLAREESELIKKLSASGDVNRTEVIRAARSLNDSEAKL----------- 210

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                           YL++   +L + +   A  +  LT  ++  E     + + G + 
Sbjct: 211 ----------LNRKNTYLEDAGAELAKAEDEIAQNVQVLTQRKQQLEDSIFKALLPGIVK 260

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +  +     +  + LM+I+P      + AK++P  I  V+KG  AT+RF  +      
Sbjct: 261 NVRVTTIGGVLRAGEELMQIIPVGDELILEAKISPADIAQVRKGLNATIRFDPFDYTIYG 320

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKI---TDLAFSDNNIELRNGFPAEVLFTAK 418
                +  +     +++     + YY V +          S   +++  G  A++     
Sbjct: 321 GVIGEVVYVSADTLKEEKGQGEEIYYRVHVSTKTNPVTTTSGKVLDILPGMTAQIDIKTS 380

Query: 419 NTTLAQEIIHPITDNWPKIF 438
           + T+   ++ P+     + F
Sbjct: 381 DRTVLNYLLKPLRKTLAESF 400


>gi|283786614|ref|YP_003366479.1| membrane fusion protein of T1SS [Citrobacter rodentium ICC168]
 gi|282950068|emb|CBG89700.1| putative membrane fusion protein of T1SS [Citrobacter rodentium
           ICC168]
          Length = 426

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 71/420 (16%), Positives = 132/420 (31%), Gaps = 58/420 (13%)

Query: 15  ASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
            S     LLS+I  +   + W+ L  I+      G ++       I+S   GI+ K  V 
Sbjct: 51  TSRALYILLSVIFFLSIFLLWASLFSIDEVSKGDGRVIPSSKEKIIQSLDGGILDKIHVT 110

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  +   + I T   +   +   + L        + +    +   ++  A  +
Sbjct: 111 EGQIVQAGDIIANLDTIRTQAAVMESESKYRALLASKVRLLAEI----SDSPLVFPAELN 166

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
              ++ D     + +    +   I                      D+E    LL     
Sbjct: 167 DFPEITDRERILYHSRKNNYISSIK---------------------DIEASKVLL----- 200

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              K+L +   L E+ A S+ D+ +  + +                          E+ L
Sbjct: 201 --NKELAINTRLMEQGASSKVDVIRSRKQLVDLN--------------------MKESEL 238

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
            + NY  +   +L +          K+       ++ TI SP+ G +   +  +      
Sbjct: 239 HY-NYKVKSGEELSRISAEVDSLYQKIVGQRDLLKKSTITSPVRGIVKNIEINTIGGVIP 297

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            +  +M IVP      I AK+ P+ I  +  G  A V+   Y           +  I P 
Sbjct: 298 PNGTIMNIVPLDDRLLIEAKILPRDIAFIHPGQRAIVKITAYDYSIYGGLDGEVVTISPD 357

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIHPI 430
                       +Y V ++ T       N +   +  G  A V       T+ Q +I P 
Sbjct: 358 TISDPQKPDV-VFYRVYIRTTKDHLQTANNKKHFISPGMVASVDIKTGKKTILQYLIKPF 416


>gi|260221994|emb|CBA31114.1| hypothetical protein Csp_C26930 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 391

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 54/389 (13%), Positives = 130/389 (33%), Gaps = 13/389 (3%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
            +     +  ++S   GI+ +     G  +  G  LL  +       +   +    ++  
Sbjct: 12  RLSPSRQIQILQSLDGGIVSEILAREGQVVKTGDLLLKVDPTRMVSSLRENQSQYLSMLA 71

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
                ++  +                 E++L    +       ++    + +  ++ +  
Sbjct: 72  KAARLRALAEGSRF----------VPPEEVLKQAPEIVEQERALYESRRAELDATVGVAR 121

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            +        + ++ +        +   K+L + + L +  A+S  +L + ER V +   
Sbjct: 122 QQSSQRSQELISVKARREQASQSYTLTAKELELTRPLVKTGAISDVELLRLERDVARYRG 181

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E      +   +   + E   +       +      +L +            T LE   +
Sbjct: 182 ERDSANSDIPRLESAVAESNRKIQEVELTFRNIARSELSETNAKLNALSEGSTALEDRVK 241

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           Q  I SP+ GT+   +  +     Q  + L+++VP      + A+V P+ I  ++ G  A
Sbjct: 242 QTEIRSPVNGTVKQLRVNTVGGVVQPGKDLIELVPSDDALLLEARVLPRDIAFLRPGQKA 301

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            V+F  Y        +A +E+I       +   +   ++ V ++          + +  G
Sbjct: 302 LVKFTAYDFAVYGGLEATLEQIGADSVVDE---KGNAFFVVRVRTLSTTIGQQKLPIIPG 358

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
             AEV       ++   ++ PI     K 
Sbjct: 359 MVAEVDILTGKKSVLAYLMKPILRAKSKA 387


>gi|161502211|ref|YP_001569323.1| hypothetical protein SARI_00235 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863558|gb|ABX20181.1| hypothetical protein SARI_00235 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 396

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 61/431 (14%), Positives = 132/431 (30%), Gaps = 61/431 (14%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ +
Sbjct: 17  REREFSGAGRIVLICSLLFLILGVWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILAQ 76

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V  G ++     +   +       +       +           +   L  +   L  
Sbjct: 77  LTVREGDRVQANQIVARLDPTRLASNVGESAAKYRASLA-------SSARLTAEVSDLPL 129

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           AF        D +                             R     R  L +    LR
Sbjct: 130 AFPDELNDWPDLID-------------------------AETRLYKSRRAQLADTEVELR 164

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L+S  K+L + + L +  A S  ++ + +R      L++ +   +             
Sbjct: 165 DALASVNKELAITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLRSQ------------- 211

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                   Y  +    L +         + L   E +  + T+ SP+ G +   Q  +  
Sbjct: 212 --------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTVRSPVRGIVKNIQVTTIG 263

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                +  +M+IVP      I  +++P+ I  +  G  A V+   Y        + ++E 
Sbjct: 264 GVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLEGVVET 323

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQEI 426
           I P   Q     +   YY V ++       +       +  G  A V        +   +
Sbjct: 324 ISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKIIVDYL 382

Query: 427 IHPITDNWPKI 437
           I P    + + 
Sbjct: 383 IKP----FNRA 389


>gi|284920299|emb|CBG33359.1| type I secretion system protein [Escherichia coli 042]
          Length = 391

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 62/427 (14%), Positives = 133/427 (31%), Gaps = 57/427 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + L             ++ + ++  + W+    ++   + SG +        ++S   GI
Sbjct: 9   RGLTEPRLPRSVLAVRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQVVQSLEGGI 68

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+ G  + QG PL      +T   +     ++  L   + T       ++NK  V
Sbjct: 69  LYHLDVKVGDIVEQGQPLAQLNRTKTESDVQE---AMSRLYAALATSARLRAEVSNKPLV 125

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                    E +      Y++                              R  L   ++
Sbjct: 126 FPDELNKFPELIESETALYNT-----------------------------RRDGLNKATT 156

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L   +S   ++L M + L ++ A S  ++ + +R                       NE
Sbjct: 157 GLTQGISLVNRELAMTQPLVKQGAASSVEVLRLQR---------------------QANE 195

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L ++ +     Y  +   +L +       + S +   E +  +    +P+ G +      
Sbjct: 196 LENKLSDVRTQYYVQAREELAKANAEVETQRSVIRGREDSLTRLNFTAPVRGIVQDIDVT 255

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +          LM IVP  +   I AK++P+ +  +  G  + V+   Y           
Sbjct: 256 TVGGVIAPGGKLMTIVPLDEQLLIEAKISPRDVAFIHPGQKSLVKITAYDYSIYGGLPGE 315

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLA 423
           +  I P   Q +       YY V ++       +       +  G  A V       ++ 
Sbjct: 316 VAVISPDTVQDEVRRDV-YYYRVYIRTFSNHLENKHKQQFPIFPGMVATVDIRTGKKSVL 374

Query: 424 QEIIHPI 430
             ++ P 
Sbjct: 375 DYLLKPF 381


>gi|307296485|ref|ZP_07576308.1| type I secretion membrane fusion protein, HlyD family [Sphingobium
           chlorophenolicum L-1]
 gi|306877999|gb|EFN09223.1| type I secretion membrane fusion protein, HlyD family [Sphingobium
           chlorophenolicum L-1]
          Length = 390

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 72/432 (16%), Positives = 150/432 (34%), Gaps = 58/432 (13%)

Query: 11  RNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           RN       + ++ II    L + WS    ++    + G+I+    V  I+S   G I  
Sbjct: 8   RNRWLRPSSLIIIGIIAFFSLALIWSFWAELDQVSRAPGQIIPTGRVQVIQSTDGGKIAN 67

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V  G  + +G  L+  +D + +  +   +  + +L        S++  +N +      
Sbjct: 68  ILVREGEAVKKGQLLVQLDDTKISAAVGEAQGKVASLM-------SSMARINAELFDRPL 120

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           AF +  +   DF+        K                          R  L+++ + LR
Sbjct: 121 AFPAEVKPFPDFMANQTLLYQK-------------------------RRQALQDQLASLR 155

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A+L+  +++L M   L +   VS+ D+ + +R V     +++  I   KN          
Sbjct: 156 AMLALMEQELNMNMPLLQHGDVSRADVLRLQRGVS----DIQSQIVNAKN---------- 201

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                   Y++++  +  + +                 E   I++P+ G +   +  +  
Sbjct: 202 -------KYIQDLQAEYTKTEEDLVTAREVFNQRSDALEDTRIVAPVDGIVKNVRLTTIG 254

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              + S  ++ IVP      +  K+ P  I +V+ G  A+V+F  Y           +  
Sbjct: 255 GVLRPSDEVVSIVPTGDQLILETKMPPSDIAYVRVGQPASVKFDAYDSSIYGSALGRVTY 314

Query: 370 IDPIISQQDNNLQTQEYYEVIL----KITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           + P    + +      +Y V +    +          IE++ G  A         T+   
Sbjct: 315 VSPDTLAEQSPQGEIYHYRVHIIADPRPMKPHLRGEKIEIQPGMTATAEIQTGRNTVWHY 374

Query: 426 IIHPITDNWPKI 437
           +  PI     + 
Sbjct: 375 LTKPINKTLSEA 386


>gi|317487237|ref|ZP_07946035.1| HlyD family type I secretion membrane fusion protein [Bilophila
           wadsworthia 3_1_6]
 gi|316921527|gb|EFV42815.1| HlyD family type I secretion membrane fusion protein [Bilophila
           wadsworthia 3_1_6]
          Length = 447

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 65/427 (15%), Positives = 148/427 (34%), Gaps = 15/427 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L R      + ++L + + +I  + W+    I+      G++++  +   I++   GI
Sbjct: 24  AALHRRPRIGARGLSLGTAVAVILFLIWANHSEIDEVSRGQGQVISSQHTQVIENLEGGI 83

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  V  G  + +GTPL    +     L        +     I   ++ L+   +   V
Sbjct: 84  LQEMLVYEGQIVDKGTPLARLSNETAESLYRDALGKSRENTIAIIRLRAELE---DHEPV 140

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                 +   Q+++    +++T  K            L++  ++         + +N+  
Sbjct: 141 FPADLAATSPQIIEDQLLFYATRKK-------QRTAELEVLHSQYVQRAQEIEEEKNRKQ 193

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L    + + M + L  +N  S+ D   Q++ V     ++               E
Sbjct: 194 QAERELGLALQQVGMTQGLVARNLYSKVDFLNQQQKVAALQGDISVLKASIPKAEAAAQE 253

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +  L  A    +I  ++ + +   A     L        +  + SP+ GTI      
Sbjct: 254 ALQKYELRKAEMNSQIVEEVNKRRAELASLTESLAAGSDRVTRTELKSPVRGTIKQIMLK 313

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +    A+  +P+M+IVP      +  ++ P  I  ++    A V+   Y        +  
Sbjct: 314 TVGGVAKPGEPIMEIVPLDDTLLVETRIRPGDIAFIRPNQKAMVKVTAYDFSIYGGLQGE 373

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +E+I     +     +   +Y   ++ T  A       + +  G    V       T+  
Sbjct: 374 VEQISADTIED---RKGDLFYVAKIRTTGNAIIHRGEQLPIIPGMVCTVDILTGKKTILD 430

Query: 425 EIIHPIT 431
            ++ PI 
Sbjct: 431 FLLKPIL 437


>gi|330809469|ref|YP_004353931.1| HlyD family secretion protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377577|gb|AEA68927.1| putative HlyD family secretion protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 456

 Score =  268 bits (684), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 73/438 (16%), Positives = 162/438 (36%), Gaps = 15/438 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +   +  ++ +      ++ + G + W+ L P++  V  SG ++       ++S   G++
Sbjct: 26  SASTDAGSAARYGVGFLVLTLGGFLLWACLAPLDQGVVGSGTVVVAGERKAVQSLVGGVV 85

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKY 124
           +K  V +G ++ QG  L+    ++    +D+    + N R     +  E+     +    
Sbjct: 86  EKLLVSDGDRVTQGQLLVQLNTVQAQSQLDVTLGKLLNDRSIEARLIAERLGNAEIQWPA 145

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++L  A E R +  +    +   T        +  +         ++       L  E  
Sbjct: 146 ELLAHADEPRVKAAMALQSQLFITRRAELGSRLQIIEHEAAALQQQL-------LGYEGV 198

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                A +   Q++L  +++L  +  V +N L + ER   +   ++   + +     + I
Sbjct: 199 KRNYDAQMRFQQQELEGLRDLAREGYVPRNKLFEAERNAAQLAGQIASGVGDVGRTRQAI 258

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           NE   +A      + ++    L +     A    ++  L+   +   I +P+AG ++   
Sbjct: 259 NESRLKALQAQQEFRRDAETQLSEVSAEAAGYADQIRALQFEVDNGAIRAPVAGQVMDVS 318

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +    AQ  Q LM++VP      I A+  P     ++ G    V F     +      
Sbjct: 319 IHTVGGVAQAGQTLMQVVPLDAPMAITARFEPLMANKLRPGLPVHVHFTALQRVDTPTVT 378

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTT 421
             +  +     Q  N    Q Y+   ++I     +A     + +R G  A+V       T
Sbjct: 379 GTVTTVSAD--QLINEQTHQPYFSAKVEIPADTVVALQSAGLLVRPGMLADVTVVTGERT 436

Query: 422 LAQEIIHPITDNWPKIFE 439
           L   ++ P+ +     F+
Sbjct: 437 LMNYLMKPLRERLLAAFK 454


>gi|242279547|ref|YP_002991676.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio salexigens DSM 2638]
 gi|242122441|gb|ACS80137.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio salexigens DSM 2638]
          Length = 445

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 68/432 (15%), Positives = 161/432 (37%), Gaps = 24/432 (5%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P  ++ + +   + I G + W  +  I+     SG+I+   ++  ++S   GI+    + 
Sbjct: 30  PQLVRYVIITLTLVIAGFVAWVSVTRIDEVAVCSGKIIPSGHIKRVQSEDGGIVSDILIR 89

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +G  + +G  L+  +   +   +D   V   +L    +   + +D     Y  +++ ++ 
Sbjct: 90  DGQAVKKGQDLIAMDPTVSVSNLDQHLVREASLDLRKERLAALIDGRKPDYSKVDERYKE 149

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
              Q             ++ +  I S+  S  +   +++       +L  +   LR   +
Sbjct: 150 LAAQ-----------QRRLHSQKIESMKASRAILNNQIKQYEAELKELSTREENLRQQYA 198

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +++    ++LF+K  V +++    +R      L ++EN+H+       + E   E+  
Sbjct: 199 LLKEEYESYEDLFKKQLVGKSEYFSVKRQF----LHVQENLHQIPVRRIQVGEKLTESKN 254

Query: 254 EFANYLKEISR----DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                 +E       +L   +   ++    +   E    Q ++ +P  G +   Q  S  
Sbjct: 255 RLVKLKEEALESWMSELAIVEAEASEIHEIIKRFEMDVFQLSVKAPEDGVVHNLQINSPG 314

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              +  + ++++VP  K      +++ + + H+K G   TV+F  Y   R    K  +  
Sbjct: 315 EVDKPGETVLELVPVGKELIAEVRISSRDVGHIKVGQAVTVKFTAYDFARYGGIKGKLTD 374

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQEII 427
           I P     +   +   YYE  + +           +++  G            TL    +
Sbjct: 375 ISPTTIVDE---KGSVYYEGTVVLDQSYLKKGAQKLQVLPGMTVMADIRTGEKTLIGYFM 431

Query: 428 HPITDNWPKIFE 439
            PI  +  + F 
Sbjct: 432 KPIYLSLQQSFR 443


>gi|299133819|ref|ZP_07027013.1| type I secretion membrane fusion protein, HlyD family [Afipia sp.
           1NLS2]
 gi|298591655|gb|EFI51856.1| type I secretion membrane fusion protein, HlyD family [Afipia sp.
           1NLS2]
          Length = 417

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 59/436 (13%), Positives = 149/436 (34%), Gaps = 49/436 (11%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +    +   P +   +   ++  ++  I W+    ++     +  ++    +  ++S 
Sbjct: 10  NDVRAAAELKTPRASLILLGTTVALMVVGIIWAHFAVLDEVKRGNARVIPSRQLQVVQSL 69

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDF 119
             GI++   V+ G  + QG  L+  +D +       +  ++ +       ++ E   L  
Sbjct: 70  EGGIVQDILVQEGDIVKQGQVLMRIDDTKFLADLGEVRERRFANAARVARLEAEVKGLPK 129

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                 + E+A ++ +            T   VF+     + + + +             
Sbjct: 130 PTFPDKLAERAPQAVQ------------TEQNVFDARAKKLAQDVDV------------- 164

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L  +++ L   L    +++ + +NL+ +  V + ++ + +R       +L E       
Sbjct: 165 -LTQQATRLSDSLKLLSREVQLTQNLYTQKVVPEIEMLRLQRQESDMRGQLAETQARIST 223

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                           A +  +   DL +++   A         +    +  + SP+ G 
Sbjct: 224 AK--------------ATFRSQAEEDLAKSRADLAVLEETTKSAQDRVRRADLKSPVNGI 269

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I      +     Q    LM IVP      +  ++ P+ I  ++    A V+   Y    
Sbjct: 270 INKLNVTTVGAVVQPGANLMDIVPLDDSLLVEGRIRPQDIAFIRPQQNAVVKITAYDSSV 329

Query: 360 EKKFKAIIEKIDPIISQQD----NNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEV 413
               K  +E+I       D       + + +Y VI++     L  +++ + +  G  A V
Sbjct: 330 YGSLKGKVERISADSIVDDKSEQRGEKGESFYRVIVRTDKNHLGTAEHPLPIIPGMVATV 389

Query: 414 LFTAKNTTLAQEIIHP 429
                  ++   ++ P
Sbjct: 390 EVQTGEKSVLDYMMKP 405


>gi|94495049|ref|ZP_01301630.1| putative type I secretion protein [Sphingomonas sp. SKA58]
 gi|94425315|gb|EAT10335.1| putative type I secretion protein [Sphingomonas sp. SKA58]
          Length = 395

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 69/437 (15%), Positives = 144/437 (32%), Gaps = 61/437 (13%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  R    S +R+  L     +    W+    ++   S SG ++       I+S   G
Sbjct: 12  FDDEGRGRIRSARRLVWLLAALFLVAFCWAWFARLDEVASGSGRVVPTSREQVIQSLEGG 71

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I+ K  V     +  G  +   +  +    ++      +         ++ +      + 
Sbjct: 72  ILAKLMVRQDDIVHPGQIVAQLDPTQAGSTVEESAAKYRAALASAARLRAEVTGSAIDF- 130

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                        LD      S  S++++   SS                     L +  
Sbjct: 131 ----------PAELDDYPDLKSAESRLYHDRRSS---------------------LASSE 159

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            L+   L+   K++ + ++L E  A S  ++ + +R       EL     + ++      
Sbjct: 160 RLIDESLALISKEVKIGESLIEVGAASNVEVLRLKRQ----RAELALKKADLRS------ 209

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                       YL E  ++L +           +     T E+ TI SP+ G +   + 
Sbjct: 210 -----------QYLVEAQQELAKVSEEVEALGPVVRGRSDTLERLTIRSPVRGVVKSIEV 258

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +       +  +M+IVP      I A+++P+ I  +     ATV+   Y          
Sbjct: 259 STIGGVIAPNGEIMQIVPLDDQLLIEARISPRDIAFIHPNQRATVKITAYDYSIYGGLNG 318

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTL 422
           ++  I P   + + N     YY V ++   +A    +     +  G  A V     + T+
Sbjct: 319 VVSSISPDTIRDEVNPDI-YYYRVFVRTNSVALVNKAGKRFPIVPGMIATVDIHTGSKTV 377

Query: 423 AQEIIHPITDNWPKIFE 439
            Q ++ P+     +  E
Sbjct: 378 MQYLMKPL----NRARE 390


>gi|293608595|ref|ZP_06690898.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829168|gb|EFF87530.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 398

 Score =  267 bits (683), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 143/428 (33%), Gaps = 57/428 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               +  +  IG++    W+ +  +E   + +G+++       I+S   GI+ K  V+ G
Sbjct: 25  RASLVIWIVGIGLVIFFIWAWVFKLEEVSTGTGKVIPSSKEQVIQSLEGGILTKLNVQEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L   +       +   +  + + +      ++ +    N   ++      +E
Sbjct: 85  DIVQKGEILAQLDPTRFASNVGESRSLLISAQATAARLRAEV----NGTPLVFPEIVMKE 140

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L+      + +                             R DLE   + LR  L   
Sbjct: 141 PKLVQEETALYRSR----------------------------RADLEQTLAGLRQALQLV 172

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q++L M + L  K A S+ ++ +  R                       N+L ++ N   
Sbjct: 173 QQELAMTEPLVAKGAASEVEVLRLRREA---------------------NDLQNKMNDAQ 211

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y  +   +L +       +   +     + ++    +P+ G +      +      Q+
Sbjct: 212 NQYYVKAREELSKANTDSETQQQIVLGRSDSLDRAVFRAPVRGVVKEIAVTTHGGVVPQN 271

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM IVP  +   I A++ P+ I  ++ G  A V+   Y        K  +  I P   
Sbjct: 272 GKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGLKGKVTVISPDTI 331

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           + +   Q Q YY V ++       +       +  G  A V       T+   ++ P   
Sbjct: 332 RDEV-KQDQFYYRVYIRTDSDKLYNKEGKAFGITPGMVATVDIRTGQKTVLDYLLKPFNK 390

Query: 433 NWPKIFER 440
               + ER
Sbjct: 391 AKEALRER 398


>gi|169632877|ref|YP_001706613.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter baumannii SDF]
 gi|169633843|ref|YP_001707579.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter baumannii SDF]
 gi|169151669|emb|CAP00459.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           (superfamily ABC, membrane) [Acinetobacter baumannii]
 gi|169152635|emb|CAP01630.2| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           (superfamily ABC, membrane) [Acinetobacter baumannii]
          Length = 398

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 67/428 (15%), Positives = 143/428 (33%), Gaps = 57/428 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               +  +  IG++    W+ +  +E   + +G+++       I+S   GI+ K  V+ G
Sbjct: 25  RASLVIWIVGIGLVIFFIWAWVFKLEEVSTGTGKVIPSSKEQVIQSLEGGILTKLNVQEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L   +       +   K  + + +      ++ +    N   ++      +E
Sbjct: 85  DIVQKGQVLAQLDPTRFASNVGESKSLLISAQATAARLRAEV----NGTPLVFPEIVMKE 140

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L+      +++                             R +LE   +  R  L   
Sbjct: 141 PKLVQEETALYTSR----------------------------RANLEETLAGFRQALQLV 172

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q++L M + L  K A S+ ++ +  R                       N+L ++ N   
Sbjct: 173 QQELAMTEPLVAKGAASEVEVLRLRREA---------------------NDLQNKMNDAQ 211

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y  +   +L +       +   +     + ++    +P+ G +      +      Q+
Sbjct: 212 NQYYVKAREELSKANTDSETQQQIVLGRSDSLDRAVFRAPVRGVVKEIAVTTRGGVVPQN 271

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM IVP  +   I A++ P+ I  ++ G  A V+   Y        K  +  I P   
Sbjct: 272 GKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGLKGKVTVISPDTI 331

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           + +   Q Q YY V ++       +       +  G  A V       T+   ++ P   
Sbjct: 332 RDEV-KQDQFYYRVYIRTDSDKLYNKEGKAFGITPGMVATVDIRTGQKTVLDYLLKPFNK 390

Query: 433 NWPKIFER 440
               + ER
Sbjct: 391 AKEALRER 398


>gi|325124661|gb|ADY84184.1| putative protein secretion efflux system, membrane fusion protein
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 398

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 66/428 (15%), Positives = 143/428 (33%), Gaps = 57/428 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               +  +  IG++    W+ +  +E   + +G+++       I+S   GI+ K  V+ G
Sbjct: 25  RASLVIWIVGIGLVIFFIWAWVFKLEEVSTGTGKVIPSSKEQVIQSLEGGILTKLNVQEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L   +       +   +  + + +      ++ +    N   ++      +E
Sbjct: 85  DIVQKGEILAQLDPTRFASNVGESRSLLISAQATAARLRAEV----NGTPLVFPEIVMKE 140

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L+      +++                             R +LE   +  R  L   
Sbjct: 141 PKLVQEETALYTSR----------------------------RANLEETLAGFRQALQLV 172

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q++L M + L  K A S+ ++ +  R                       N+L ++ N   
Sbjct: 173 QQELAMTEPLVAKGAASEVEVLRLRREA---------------------NDLQNKMNDAQ 211

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y  +   +L +       +   +     + ++    +P+ G +      +      Q+
Sbjct: 212 NQYYVKAREELSKANTDSETQQQIVLGRSDSLDRAVFRAPVRGVVKEIAVTTHGGVIPQN 271

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM IVP  +   I A++ P+ I  ++ G  A V+   Y        K  +  I P   
Sbjct: 272 GKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGLKGKVTVISPDTI 331

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           + +   Q Q YY V ++       +       +  G  A V       T+   ++ P   
Sbjct: 332 RDEV-KQDQFYYRVYIRTDSDKLYNKEGKAFGITPGMVATVDIRTGQKTVLDYLLKPFNK 390

Query: 433 NWPKIFER 440
               + ER
Sbjct: 391 AKEALRER 398


>gi|78777389|ref|YP_393704.1| Type I secretion membrane fusion protein, HlyD [Sulfurimonas
           denitrificans DSM 1251]
 gi|78497929|gb|ABB44469.1| Type I secretion membrane fusion protein, HlyD [Sulfurimonas
           denitrificans DSM 1251]
          Length = 424

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 58/419 (13%), Positives = 141/419 (33%), Gaps = 14/419 (3%)

Query: 20  MTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           + +L II  +   + W+    I+ SV   G+++       ++    GII    V  G  +
Sbjct: 15  LFVLPIITFMSLFLIWASFAEIDESVKGVGKVIPSGQTRLLQHLEGGIITDILVAEGDAV 74

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  L   ++           + +   R  I+   + L           K   S  +++
Sbjct: 75  AEGQVLFRIQNQYFISSKKENIIKLTAFRAKIERINALLQ---------NKESISFNKEM 125

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +  + +      ++F          + +   ++        + E K + L    +   ++
Sbjct: 126 IQSIPQIIENEIQIFYGQKKKNDSEISVLDEQLSQKKAQLKEFEMKLANLSIEYNLSLEN 185

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           + +   L +K+A+S+    Q      +   ++ E  +    + + I E   +   +    
Sbjct: 186 MKIQDELIKKSAISREKYLQNLSSKQRLYTQMEEARYTIPVIKKEIAEWNKKIEGKMFEI 245

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             ++ ++  + Q         +        +  + SP  G +      +     +  + +
Sbjct: 246 RSKLLQESNEVQLEIKKLEEIIETDIDRDVRIGVTSPTKGLVNKINYNTVGGIVKSGETI 305

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            +I P      I AK+      ++  G   ++    Y   +    K  +  I P  S  +
Sbjct: 306 AEISPLDDELMIEAKINTADRAYIHPGQNVSIEITAYDSSKYGLVKGKLIGISPDSSTDE 365

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              +   +Y + ++  D  F D N  +  G  A V       T+   ++ P+ D   + 
Sbjct: 366 ---KGNNFYVIKVRANDYKF-DENSPILIGMTANVNILTGKRTVLHYLLKPMKDIKQRA 420


>gi|259418490|ref|ZP_05742408.1| type I secretion membrane fusion protein, HlyD [Silicibacter sp.
           TrichCH4B]
 gi|259345885|gb|EEW57729.1| type I secretion membrane fusion protein, HlyD [Silicibacter sp.
           TrichCH4B]
          Length = 379

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 67/424 (15%), Positives = 145/424 (34%), Gaps = 57/424 (13%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R      + M  L ++ ++  I W+ +  I       G ++    +  I+S   GI+ +
Sbjct: 6   RRQVLRKSRLMINLIVLSLLLAIGWASVAQINEITRGDGRVVPLRRMQMIQSLEGGILAE 65

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V  G  + +G  L+  +   +          I  L   +   ++ +            
Sbjct: 66  LLVSEGDIVEEGQVLVRLDPTRSESAFLAANAEITALAAEVARLEAEV------------ 113

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                                 +    +       + + T +R     R  LE     L 
Sbjct: 114 ----------------------LEQPKLDFGQNPDEAERTELRLFEARRTKLEASLEALE 151

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A   S Q+ + +   L  K +VS+ D+ + E    +   EL   I + +N          
Sbjct: 152 AERLSIQEQIDITSPLVAKGSVSRIDVLRLE----QQRAELEGKISDTRNA--------- 198

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                   Y+++  +DL Q +         +   +    +  I SP++G +      +  
Sbjct: 199 --------YVQDAYKDLAQRRAKLTALQQDVVRKQDEFLRTEIRSPVSGRVNNIDITTLG 250

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              Q  +P+M++ P      I  KV P+ +  +  G  A+V+   Y        + ++ +
Sbjct: 251 GVIQPGEPIMEVTPTDDQLLIETKVLPRDVAFIAPGMEASVKITAYDFSTYGDLRGVVTQ 310

Query: 370 IDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
           I     ++D     Q++Y V+++  +  L        +R G  A+V   +   ++   + 
Sbjct: 311 ISEDTVEEDTPQGPQDFYRVMVRTGNNFLERHGETFAIRPGMLAQVDIESGERSVLSYLT 370

Query: 428 HPIT 431
            P+ 
Sbjct: 371 RPLL 374


>gi|209885166|ref|YP_002289023.1| type I secretion membrane fusion protein, HlyD [Oligotropha
           carboxidovorans OM5]
 gi|209873362|gb|ACI93158.1| type I secretion membrane fusion protein, HlyD [Oligotropha
           carboxidovorans OM5]
          Length = 417

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 60/436 (13%), Positives = 149/436 (34%), Gaps = 49/436 (11%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +    +   P +   +   SI  ++  + W+    ++     +  ++    +  ++S 
Sbjct: 10  NDVRAAAELKTPRASLILLATSIALLVVGVIWAHFAVLDEVKRGNARVIPSRQLQVVQSL 69

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDF 119
             GI+++  V+ G  + QG  L+  +D +       +  ++++       ++ E   L  
Sbjct: 70  EGGIVQEILVQEGDIVKQGQVLMRIDDTKFLADLGEVRERRLANAARVARLEAEVQGLPK 129

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            +    + E+A             +   T   VF+     + + + +             
Sbjct: 130 PSFPEALAERA------------PQIVQTEQNVFDARAQKLAQDIDV------------- 164

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L  + + L   L    +++ + ++L+ +  V + ++ + +R       +L E      N
Sbjct: 165 -LAQQETRLTESLKLLSREVELTRHLYTQKVVPEIEMLRLQRQASDMRGQLAETQSRIAN 223

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                           A +  +   DL +++   A         +    +  + SP+ G 
Sbjct: 224 A--------------RAAFRSQAEEDLAKSRADLAVLEETTKSAQDRVRRADLKSPVNGI 269

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I      +     Q    LM IVP      +  ++ P+ I  ++    A V+   Y    
Sbjct: 270 INKLNVTTVGAVVQPGANLMDIVPLDDTLLVEGRIRPQDIAFIRPQQNAVVKITAYDSSV 329

Query: 360 EKKFKAIIEKIDPIIS----QQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEV 413
               K  +E+I               + + +Y VI++     L  ++N + +  G  A V
Sbjct: 330 YGSLKGKVERISADSIVDEKSDQRGEKGESFYRVIIRTEKNHLGSTENPLPIIPGMVATV 389

Query: 414 LFTAKNTTLAQEIIHP 429
                  ++   ++ P
Sbjct: 390 EVQTGEKSVLDYMLKP 405


>gi|83951227|ref|ZP_00959960.1| RTX secretion protein D, HlyD family protein [Roseovarius
           nubinhibens ISM]
 gi|83839126|gb|EAP78422.1| RTX secretion protein D, HlyD family protein [Roseovarius
           nubinhibens ISM]
          Length = 448

 Score =  266 bits (681), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 70/426 (16%), Positives = 155/426 (36%), Gaps = 9/426 (2%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++   L  +I  +G   W+    +  +V + G ++ +     ++ P  G +    V  G 
Sbjct: 28  MRLGWLALLILCLGFGGWAFAARLSQAVVAPGWVVRDMAAHVVQHPDGGTLAALAVRPGM 87

Query: 77  QILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           Q+ +G  L  FE  E  +   L++ +   +   R  ++ E+     ++   ++  +A   
Sbjct: 88  QVAKGALLARFEGGEIAEELILVEARLFEVMARRARLEAERDGAAAIDFDPELRNRAAGD 147

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                 + L +      ++F    ++  R       R+         L  ++  LR    
Sbjct: 148 ------EGLAETLQGQGRLFATRRAAQAREAGQARRRVAQSRAEIDGLGAQARALRRQAG 201

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++LT ++ L  +       +   ER   +   EL E    +      I E+  E   
Sbjct: 202 LIAQELTDLRQLRAQGLTPAGRVLALEREAARLDGELGEVAAHRAGAEGRIAEIELEQLG 261

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             +   + +   L   +    +      +L     +  + +P+AGTI   +        +
Sbjct: 262 RESRMRERVIDQLRDLRHREIELAETRRVLRARFARLELRAPVAGTIQQVEVHGPGAVIR 321

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            + P++ +V   +  ++ A+++P ++  +  G  A +RF        +   A +  I P 
Sbjct: 322 PAAPILTLVAGDRPIHVSAEISPLEVDQIYSGQAALLRFSALEQGEGRDVAAKVGSISPD 381

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           + Q   + +     EV  +   L        L  G P EV       + AQ ++ P+T  
Sbjct: 382 VVQDGADGRRYYRAEVWAEAEALRPLQERAGLVPGMPVEVYLQTGEQSPAQFLLRPVTAY 441

Query: 434 WPKIFE 439
           + + F 
Sbjct: 442 FNRAFR 447


>gi|149914104|ref|ZP_01902636.1| Type I secretion membrane fusion protein, HlyD [Roseobacter sp.
           AzwK-3b]
 gi|149812388|gb|EDM72219.1| Type I secretion membrane fusion protein, HlyD [Roseobacter sp.
           AzwK-3b]
          Length = 395

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 66/423 (15%), Positives = 154/423 (36%), Gaps = 55/423 (13%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
                   L     + ++ WS L  ++  V + GE ++      I++   GI+ +  V  
Sbjct: 17  RGSSLTIWLCAASFLLVLIWSALASVDEIVRADGEFISSSRPQIIQNLEGGILSELLVNA 76

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L      +    ++  +  I  L       ++ L                 
Sbjct: 77  GDIVERGDVLARLHGTQFKSSVEELRDQITALEIRRLRLEAELA---------------- 120

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                   G++  T  +        +  S ++ L         + D   +S   R +L+ 
Sbjct: 121 --------GQFDFTVPEELATRSPQIVASERVLLN------ARQTDFTKRSDGARKILAQ 166

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++  +M+NL +KN V+  ++ +  +    +               +  +E+  +  L+
Sbjct: 167 AAEERALMENLLKKNVVALIEVTRTRKDHADAE--------------KRYDEIVTQTELD 212

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A    +  ++L       A     L        +  + SP+ G +      +     + 
Sbjct: 213 RAEAYSDTLKEL-------ATLRQNLKSSLDQLNRTVLTSPMRGVVNTVGVTTIGGVVRP 265

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + +++I+P  +  ++ A+V P+ I ++++G  AT++   Y        K  ++ I    
Sbjct: 266 GEQILEIIPLDEELFVEARVAPENIANLRRGQEATIKLTAYDFTIYGTLKGTVDFISADT 325

Query: 375 SQQDN--NLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            + +N        +Y+V L++   +L    + IE+R G  A+V       T+ Q ++ P+
Sbjct: 326 FKDENARAPDGDPHYKVTLRVDTQNLTPRQSGIEIRPGMQAQVELHTGEKTVLQYLLKPL 385

Query: 431 TDN 433
             +
Sbjct: 386 YKS 388


>gi|312961579|ref|ZP_07776079.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
 gi|311284162|gb|EFQ62743.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
          Length = 413

 Score =  266 bits (680), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 68/437 (15%), Positives = 149/437 (34%), Gaps = 60/437 (13%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M+      L +  P S   + L++ + +IG + W+    +E       +I++      I+
Sbjct: 22  MNDVQESLLSQTTPGSKLVLYLIAAVLVIG-VVWAYFARVEEITLGEAKIISLSREQVIQ 80

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   GI+ +  V  G+ + +G  LL  +              +  L+  I   +S     
Sbjct: 81  SLEGGILLEMNVREGAVVEKGQVLLKIDPTRAESSYREVLSKVIGLKASIARLRSEAYQQ 140

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             ++D + K       Q                                  R+    +  
Sbjct: 141 PLEFDDMVKQDPDVVAQ--------------------------------ETRAYESRKRA 168

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L +  S L    +   +++ + + L  K  +S+ +L +  R       ++ E I+     
Sbjct: 169 LNDSISALERSFTLSSREVRLAEPLAAKGLMSEVELLRIRRSANDIKSQIVERIN----- 223

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                            +  + + +L + +   +     L      R++  I +P+ GT+
Sbjct: 224 ----------------KFQADANSELSRLELELSQISENLIGRADIRDRTVITAPVRGTV 267

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              +  +     Q  + +++IVP  +   +  K+ P  +  ++ G  ATV+   Y     
Sbjct: 268 KNVRVSTIGGVIQPGEHILEIVPLEEQLLVEGKIRPSNVAFLRPGLAATVKITAYDYAIY 327

Query: 361 KKFKAIIEKIDPIISQQDNNLQT----QEYYEVIL--KITDLAFSDNNIELRNGFPAEVL 414
              K  +E I P   + D    +      YY V++    ++L     ++ +  G  A V 
Sbjct: 328 GGLKGRVEHISPDTLKDDQKAASGRPDDTYYRVLVLTDSSELTAGGKSLPIIPGMVASVE 387

Query: 415 FTAKNTTLAQEIIHPIT 431
                 T+   ++ P+ 
Sbjct: 388 IRTGEKTILNYLLKPVL 404


>gi|152969554|ref|YP_001334663.1| putative secretion protein HlyD [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|262043704|ref|ZP_06016813.1| secretion ABC efflux system [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|150954403|gb|ABR76433.1| putative secretion protein HlyD [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|259039042|gb|EEW40204.1| secretion ABC efflux system [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 406

 Score =  266 bits (679), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 60/423 (14%), Positives = 132/423 (31%), Gaps = 61/423 (14%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +R+  L  + ++    W+    ++   + +G+++       +++   GI+ +  V  GS+
Sbjct: 35  RRLIALLALLLVVTGVWAWFATLDEVSTGTGKVIPSSREQVLQTLDGGILTELNVREGSR 94

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  +   +   +   +   +      R  +         +NN+  +   + ++    
Sbjct: 95  VAAGQVVARLDPTRSESNVGESQAKY---RASLAASIRLTAEVNNQPLIFPPSLKAWPGL 151

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L +    YHS                              R  L      L   LS    
Sbjct: 152 LAEETRLYHS-----------------------------RREQLTKSMRQLEQSLSLVNS 182

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +L + + L +  A S  ++ +           LR+   + +     +N            
Sbjct: 183 ELAINEKLAKTGAASNVEVLR-----------LRQQAADIELKKIDLN----------TR 221

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           Y  +    L +     A     +     +  + T+ SP+ G +   +  +       +  
Sbjct: 222 YYVDAREQLSKANADVASLAEVIKGRADSVARLTVRSPVQGIVKNIKVNTIGGVIAPNGE 281

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP      I A+++P+ I  +     A V+   Y          ++E I P   Q 
Sbjct: 282 LMDIVPIDGRLLIEARISPRDIAFIHPDQKALVKITAYDYAIYGALNGVVETISPDTIQD 341

Query: 378 DNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
           +       YY V ++               +  G  A V       T+   ++ P    +
Sbjct: 342 EAKPDV-YYYRVFIRTDHNYLENKRGKRFLIGPGMIATVDIKTGEKTVMDYLVKP----F 396

Query: 435 PKI 437
            + 
Sbjct: 397 NRA 399


>gi|51245961|ref|YP_065845.1| secretion proteins [Desulfotalea psychrophila LSv54]
 gi|50876998|emb|CAG36838.1| related to secretion proteins [Desulfotalea psychrophila LSv54]
          Length = 429

 Score =  266 bits (679), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 64/443 (14%), Positives = 154/443 (34%), Gaps = 61/443 (13%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           +      L+  H      +  L +I  + +I W+ +  +     + GE++    V  I+S
Sbjct: 39  NDRAIARLESYHRGRYSLVLWLLLIAFVIVILWASVFQLNQVARARGEVIASSRVQIIQS 98

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALD 118
              G++ +  V  G Q+  G  L   +   +   +   +  +  L+     +  E + +D
Sbjct: 99  VDGGVLAELNVREGDQVKPGQVLARLDQTRSGASVKEIEARLSALKAKATRLRAEVTEVD 158

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L    ++L+                         +    +V R+L  +          R
Sbjct: 159 KLIFPEELLK-------------------------HPETVAVERALFQQ---------RR 184

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             L+ +   L+  +   Q+++T++ NL     V+++++ + +R +  +  +L        
Sbjct: 185 TGLKEELKTLKVAVKLAQEEVTLLTNLERSGDVNRSEVIRTKRALNDAKSKL-------- 236

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                         +    + +E S +L + +   A         ++  E     + + G
Sbjct: 237 -------------IVRKNRHFEEASTELIKAEDGIAQNEQIFAQRKQQLEDSVFTALVPG 283

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   +  +     +  + LM+I+P      I AKV+P  I  V+ G  AT+RF  +   
Sbjct: 284 IVKNVRVTTVGGVLRAGEELMQIIPVGDDLIIEAKVSPTDIALVRPGLVATIRFDPFDYT 343

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL---KITDLAFSDNNIELRNGFPAEVLF 415
                   +  +     ++        YY V +          +   +++  G  A++  
Sbjct: 344 IFGGVTGKVVYVSADTLKEKTARGEDIYYRVHVITEMTPVTTTTGKVLDILPGMTAQLDI 403

Query: 416 TAKNTTLAQEIIHPITDNWPKIF 438
                ++ + ++ P+       F
Sbjct: 404 RTGERSVLEYMLKPLRKTVSNAF 426


>gi|144900297|emb|CAM77161.1| Type I secretion membrane fusion protein, HlyD [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 457

 Score =  266 bits (679), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 62/430 (14%), Positives = 149/430 (34%), Gaps = 21/430 (4%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A  +   ++    +   I W+  + I+    + G  +   +V  ++    GI+++  VE+
Sbjct: 42  AVSRAAVIIVSAVVAAFIVWASFMRIDEVAVTFGTAVPSRSVQVVQHLEGGIVREILVED 101

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
            + +  G  L+  + I+ +  ++  +     L    +  ++ ++     +      +   
Sbjct: 102 RAMVEAGQVLVRLDPIQASAELEQAQSRRAGLAIKSERLRAFVENRQPDFSGFGVKYAPM 161

Query: 135 EEQLLDFLG---KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               LD L    +  S+  KVF   I      ++    + RS                  
Sbjct: 162 IVDQLDILRANTERWSSQRKVFEEQIMQKREEIRAAQNQQRSA--------------EEQ 207

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L    +++ M + L+     S+ D     R       EL     ++    + + EL    
Sbjct: 208 LKLVSEEVGMREQLYNSGYSSKVDFYAVRRQRAAVEAELSRLKGQEATAAKALEELAKRI 267

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                N  ++   +L             ++ L     +  I+SP  G +   ++ +    
Sbjct: 268 GDLDNNIRQDTLGELGTVSTELVQVEESMSRLHDRVNRLEIVSPAKGFVQNLKAKTVGAV 327

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 LM+IVP      +  +++ + + H+  G    ++   Y  +R    +  +  I 
Sbjct: 328 VPAGGMLMEIVPVDDELLVETRISTRDVGHLHSGQKVIIKVASYDFVRFGSVEGTLRDIS 387

Query: 372 PIISQQDNNLQTQEYYE--VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                 + +   Q YY+  V+L+   +   +    +  G   +      + TL Q ++ P
Sbjct: 388 ATTYVDEKDN--QPYYKGWVLLQHPYVGTHEGQNRILPGMTVQADIITGDKTLLQYLLKP 445

Query: 430 ITDNWPKIFE 439
           +  ++ + F 
Sbjct: 446 LQASFSQAFR 455


>gi|99080369|ref|YP_612523.1| Type I secretion membrane fusion protein, HlyD [Ruegeria sp.
           TM1040]
 gi|99036649|gb|ABF63261.1| Type I secretion membrane fusion protein HlyD [Ruegeria sp. TM1040]
          Length = 390

 Score =  265 bits (678), Expect = 9e-69,   Method: Composition-based stats.
 Identities = 60/426 (14%), Positives = 153/426 (35%), Gaps = 54/426 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
              RM  L  + ++  +TW+    ++  V + G++++      +++   GI+ +  V  G
Sbjct: 15  GASRMIKLVALVLVMFVTWAGFASVDEIVRADGQVVSSSRAQIVQNLEGGILAELYVRQG 74

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  L   +D +     D  +  I  L       ++ ++                 
Sbjct: 75  DTVQAGQILAKLQDTKFRAASDDLQDQIDALEIKQYRLEAEIE----------------- 117

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                  G Y              +  S +  L   +S      D +++ +    +L   
Sbjct: 118 -------GAYEFAVPDALASRSPDILASERALLKARQS------DFDSRRNSAEDILRQL 164

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + +L+ +++L E+  V+  ++N+ ++ V                     +E+  +A L  
Sbjct: 165 KNELSNLQSLHEQKIVALLEVNEAKKKVSD--------------AQAKFDEIGTQAELTL 210

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A        +     R       +  +     ++  I SP+AG +      +     +  
Sbjct: 211 AE-------EYSDTLRELTSLRQEQRLARDQLDRTVITSPMAGIVNSLAVTTIGGVVRPG 263

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             +++I+P  +  ++ A+V P+ I +V++G   T++   Y        +  ++ +     
Sbjct: 264 DEILEIIPLGEELFVEARVKPEDIANVQRGQDVTIKLTAYDYTIYGSLRGKVDIVSADTF 323

Query: 376 QQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           + + + +   +Y V +++   +       IE+R G  A       + T+   ++ P+  +
Sbjct: 324 EDERDPRAAPFYRVTVRVDRSSLTARQKQIEIRPGMRATAELQTGSKTILSYLLKPLYKS 383

Query: 434 WPKIFE 439
             + F 
Sbjct: 384 -REAFR 388


>gi|156348444|ref|XP_001621851.1| hypothetical protein NEMVEDRAFT_v1g221504 [Nematostella vectensis]
 gi|156208152|gb|EDO29751.1| predicted protein [Nematostella vectensis]
          Length = 1090

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 56/358 (15%), Positives = 131/358 (36%), Gaps = 13/358 (3%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+ +    + +I++   GI+ +  V  G  +  G PLL  +D      +   +     L 
Sbjct: 1   GKAIPSSRLQKIQNLEGGIVAELFVREGQIVDAGDPLLRLDDTRFASNVGETEADRLALL 60

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++   +           ++       +++ + + +      ++FN     +   +   
Sbjct: 61  LRVERLSAE----------VQDRELVVADEVREKVPRQADNEIQLFNSRKQQLLDEVAGL 110

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             ++        +  +K    R  LS  ++++ M + L  + A+SQ ++ + +R   ++ 
Sbjct: 111 EEQLIQRQQELREFASKQGQFRNSLSLLRQEVQMSEPLVAQGAISQVEVLRLKRAEVEAR 170

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L             I E+  + +     +  E   +L + +   +   S    LE   
Sbjct: 171 GQLEATTLAIPRAESAIKEVERKIDETRGRFRSEALTELNEARTELSKIQSTGKALEDRV 230

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +  ++SP+ G +      +     Q    L++IVP  +   + A++ P+ I  +  G  
Sbjct: 231 NRTLVISPVRGIVKQLLVTTIGGVIQPGSDLVEIVPLGENLLVEARIRPQDIAFLHPGQE 290

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
           A V+F  Y        KA +E+I       D+      +Y + L+           E+
Sbjct: 291 AMVKFTAYDYTIYGGLKAELEQIGADTVTDDD---GNSFYVIKLRTNKSHLGRAEFEV 345


>gi|294010596|ref|YP_003544056.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292673926|dbj|BAI95444.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 452

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 57/430 (13%), Positives = 149/430 (34%), Gaps = 12/430 (2%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +++  +++I+   G + W+    ++ +  ++G ++       ++    G++    V  G 
Sbjct: 26  IRQGLIIAILFFAGFLGWTAFSRLDAAAYATGRLIVAGQRQSVQHRDGGVVGSIHVREGQ 85

Query: 77  QILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           ++ +G  L+T    E       +  + + +   R  ++ E+  L  +N   + L      
Sbjct: 86  RVERGRLLMTLAAAEVQAQERALASQAIRLLAQRARLEAEQMGLSQINEPQEFLSLQPRD 145

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R +  L                 ++ +         ++            ++   R  L 
Sbjct: 146 RADAALAM-----KLQRAELQARVAVLAAQRDALQQQVVQSGEQGRGYNEQAVSTREQLR 200

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              + +  ++ + EK  VS+  + + ER+      +  +           + E   +   
Sbjct: 201 LIDEQIAALRPVAEKGFVSKTRMRELERMRASLEGQRGQYNASVAQTRGAVRENEIQVLE 260

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              ++ +  + +L   +    D + K         +  I +P  G IV    F+      
Sbjct: 261 AERSFRERTASELRDVELRLGDVLPKWRAARDQLARTEIRAPATGAIVGLTVFTPGGVIS 320

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q LM I+P  +   I+ +++P     ++ G    V+F    +      +  + ++   
Sbjct: 321 PGQKLMDIIPERQPLRIQMQISPDDADDLQMGQKLLVKFSGLHERTLPNLEGELTRLSAD 380

Query: 374 ISQQDNNLQTQEYYEVILKITDLAF----SDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
               + + Q+    E  + ++ L         +  LR G P +VL   +  +     + P
Sbjct: 381 SFIDERSGQSYFTGEAAVPLSQLQLIRKVRGEDFALRAGMPVQVLIPLRKRSALDYALEP 440

Query: 430 ITDNWPKIFE 439
           +  ++   F 
Sbjct: 441 LIGSFWSSFR 450


>gi|29421528|gb|AAO73504.1| RsaE [Caulobacter vibrioides]
          Length = 419

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 58/429 (13%), Positives = 159/429 (37%), Gaps = 14/429 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     +    N+ +  +    +  +  +GLI W+    ++ +V ++G +++ +    ++
Sbjct: 1   MKPPKIQRPTDNYKSVARIGYGIIALAFVGLIGWAAFAWLDSAVIANG-VISAEVSQTVQ 59

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSAL 117
               G+++K  V  G ++  G  L   E  +      + +     L+     +  E+   
Sbjct: 60  HLEGGMLRKILVREGEKVRAGQVLFELEPTQANSAAGITQNQFLALKGMEARLLAERDQR 119

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             ++     + +  +         + +  +     F+    ++   + +   +       
Sbjct: 120 PSISLPARPVSQRADP-------MVTRAIADEQAQFSERRQTIKGQVDLMNAQRLQYQSE 172

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              +E ++  L+  +   + +L  ++ L++K  V +  L   ER     +  +     ++
Sbjct: 173 IEGIERQTQGLKDQIGFIKDELIDLRKLYDKGLVPRPRLLALERREGSLSGSIGRLTADR 232

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              ++  +E   +       + +E+S+ + + +   A+   K  +    + +  I+SP+ 
Sbjct: 233 AKAVQGASETQLKVRQIKQEFFEEVSQSISETRVRLAEVTEKELVASDAQRRIKIVSPVN 292

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT    + F+     + ++PL+ I P      I+A   P  + +V  G    VR P +  
Sbjct: 293 GTAQNLRFFTDGAVVRPAEPLVDIAPEDDAFVIQAHFQPTDVDNVHGGMVTEVRLPAFHS 352

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFT 416
            +          I  +  +  +       +  I+++       +   ++  G PA+V+  
Sbjct: 353 AKNPDPNRH--DIVAVRDRITDPQGQVPIFLGIVRVDVKQLPPHFRGKVTAGMPAQVIVP 410

Query: 417 AKNTTLAQE 425
               T+ Q 
Sbjct: 411 TGERTVLQY 419


>gi|83312258|ref|YP_422522.1| membrane-fusion protein [Magnetospirillum magneticum AMB-1]
 gi|82947099|dbj|BAE51963.1| Membrane-fusion protein [Magnetospirillum magneticum AMB-1]
          Length = 443

 Score =  264 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 70/439 (15%), Positives = 163/439 (37%), Gaps = 29/439 (6%)

Query: 7   KNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +++  +    + R+ ++++ G ++  I W+ +  +E+   ++GEI     + ++     G
Sbjct: 18  QSMGEDDVDPIARLMVMALSGALVVFILWASIGQLEVVSVATGEIAPSSQLKQLSHLEGG 77

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNN 122
           I+ +  V  G Q+  G PLLT +  ++T  +      + +LR     ++    +   +  
Sbjct: 78  IVGEILVAEGDQVRAGQPLLTLQATKSTADLGELSQRLLSLRFEILRLEAASDSKSEIQF 137

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             D+L++  +                    F    + +   L     +++          
Sbjct: 138 PADLLKQYPD------------LAKEADAFFRSRRARLASELSGADEQIKQRQQEINGFR 185

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           ++    R  L    + + +  +L +K+   QN        + K   EL+  I+E ++ L 
Sbjct: 186 SRIQNDRHSLELLNEQIAISDDLLKKDL--QNRFVHI--DLLKQASELKGRINEAESALS 241

Query: 243 HINELYDEANLEFAN----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             N    EA+ + A     + +E    L++ +R F++   +        ++  I +P+ G
Sbjct: 242 RSNAALAEAHAQKAKVTAAFEEESRTQLDKARREFSELSQRTASFSDNLDRTVINAPVGG 301

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +      +     +   P++ +VP      + AK+ P+ + +VK G  A V+       
Sbjct: 302 IVKKLYFVTQGGVIRPGAPVIDLVPSDDRLLVEAKLPPQNVGYVKVGDPAYVKLTSPDAA 361

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFT 416
              +  A +  I P    ++       +Y+V L +    F        L  G    V   
Sbjct: 362 LFGRLHAKVIHISPDTFTEEKIGT---FYKVRLSVERDFFDGGGERYQLLPGVQVAVDIV 418

Query: 417 AKNTTLAQEIIHPITDNWP 435
               ++ + +  P      
Sbjct: 419 TGTRSVMRYLFGPYLRQMS 437


>gi|157964017|ref|YP_001504051.1| HlyD family type I secretion membrane fusion protein [Shewanella
           pealeana ATCC 700345]
 gi|157849017|gb|ABV89516.1| type I secretion membrane fusion protein, HlyD family [Shewanella
           pealeana ATCC 700345]
          Length = 437

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 76/433 (17%), Positives = 155/433 (35%), Gaps = 12/433 (2%)

Query: 5   MWKNLKRNHPASLKR---MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           M   L   H    KR   +  L    I+  + W+    +E  V   G ++    V +I+S
Sbjct: 1   MSGRLHIKHLEGAKRANQLIFLVAALIVVTLVWASFAKLEEVVVGEGMVVPTLAVQQIES 60

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL---KKVSIKNLRCHIDTEKSALD 118
              GI+K+  V  G  +  G PLL  +++      D    +  ++K  +  +D E S++ 
Sbjct: 61  LDGGILKQVLVREGQSVSAGEPLLLLDELRFASAYDEANIQAAALKRQKARLDAEISSV- 119

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +++           + + +        +    ++   +S +   L+     +       
Sbjct: 120 VIDDAASYWRDKVLIKPKAISALDVSVSTRSKAIYRSRLSQLSSQLEQSAQVIEQKVQAI 179

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            +    +    + L   ++++ M +    + AV++ +L + ER   +   EL  +    +
Sbjct: 180 EEGLITTQAQLSGLQLVKQEIVMTRAAVREGAVAELELLKLERDEIRLKGELSASKANGR 239

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +    N+   E      ++L     +  +           +  L     +  I+SPI G
Sbjct: 240 QLRAAQNQAEAEYLTVALDFLSRAEAERNEVINELNALTESIKTLADRLARTQIVSPING 299

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +      S     +  + +M IVP      I  ++ PK I  V  G  ATV+F  Y  +
Sbjct: 300 NVTNILVRSIGAVVEPGESIMGIVPQDGALIIETRIAPKDIAFVHTGLQATVKFTAYDFV 359

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                K  +  + P   Q D+      Y+E  +K  +     N   + +G  A       
Sbjct: 360 IYGGLKGEVIYVSPDAQQLDDGTT---YFEAHIKTEENVL--NGWPIISGMQASTDILTG 414

Query: 419 NTTLAQEIIHPIT 431
             T+    + P+ 
Sbjct: 415 EKTVLNYWLKPLL 427


>gi|304394767|ref|ZP_07376665.1| type I secretion membrane fusion protein, HlyD [Ahrensia sp.
           R2A130]
 gi|303293066|gb|EFL87468.1| type I secretion membrane fusion protein, HlyD [Ahrensia sp.
           R2A130]
          Length = 426

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 70/434 (16%), Positives = 153/434 (35%), Gaps = 11/434 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M  +L R        +  + +  +   + WS    +    S  G ++    +  +++   
Sbjct: 1   MSADLLRPRNGLSIALICVLVGTLATGVAWSTQAAMVEVSSGQGRVIPSGRIKLVQNLEG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI++   V+ G ++ +G  L++ + I    ++   K +I+ +   +    +    L ++ 
Sbjct: 61  GIVQVIHVDEGERVNKGDLLVSIDPIAAGAVLAENKAAIREMDAAVQWLTA---LLKDRE 117

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                A ++  +QLLD     + +        +S    +L+    +     L   + + +
Sbjct: 118 PQFASADDTGHQQLLDRNRTEYHSV-------LSEQKATLRSIAKQAEQKRLELSETQGR 170

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S  +A L    +   MM  L +  A S+ D+   +    +   +          +   I
Sbjct: 171 LSNTKAALVVANEQYGMMAKLRKSRAASRADVLTAKSRKVELEGQRDAMQLAVPRLRAAI 230

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E       + A +   IS  L +     A     + +      +  + SP+ G I    
Sbjct: 231 SEAEARREEQVARFRSRISMRLNEVSAKLASVRQSVAVDVDRVSRAELRSPVNGIIKVLH 290

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           + +     + ++ +++IVP      +R +V+PK I  +  G  A V+   Y        K
Sbjct: 291 ANTIGQVVKPAENIVEIVPIEDKLLVRVEVSPKDIAFLHPGQEAVVKLTAYDYALYGALK 350

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             + +I       D         +V   +  L   +  + +  G  A V     + T+  
Sbjct: 351 GKVVRIGADSIVDDRGDTHFPV-DVRSDVNWLESGEERLPILPGMVATVDIVTGDKTVFD 409

Query: 425 EIIHPITDNWPKIF 438
            I  PI       F
Sbjct: 410 YITKPIHRTATGAF 423


>gi|239834751|ref|ZP_04683079.1| type I secretion membrane fusion protein, HlyD family [Ochrobactrum
           intermedium LMG 3301]
 gi|239822814|gb|EEQ94383.1| type I secretion membrane fusion protein, HlyD family [Ochrobactrum
           intermedium LMG 3301]
          Length = 396

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 67/428 (15%), Positives = 142/428 (33%), Gaps = 61/428 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              KR   L  +    L+ W+ L  ++   + +G+++       I+S   G++ K  V  
Sbjct: 22  KRSKRFVRLVFLFFAVLLIWAYLALLDEVSTGTGKVVPTSQEQVIQSLEGGVLAKLYVRQ 81

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              +  G  L   +   T   +       +          + ++  + ++     AF S 
Sbjct: 82  DDVVEPGKILAQLDPTVTEATVQESSAKYRAALASSARLTAEVNGSDLEFPDELDAFPS- 140

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                       ++ +K++     S+  SL                       L      
Sbjct: 141 ----------LQASETKLYEARKRSLKESLDW---------------------LAESKKL 169

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q +L + ++L +  A S  ++ + +R                      + EL  +    
Sbjct: 170 AQDELAISQSLTKMGAASNVEVIRLKR---------------------QLVELQLKETEI 208

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            ++Y+ +   +L +         S +     +  + T+ SP+ G +   +  +       
Sbjct: 209 QSDYIVKAREELAKANADVESLSSVIRGRADSLARLTLRSPVRGIVKNIEVSTIGGVVPP 268

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           +  LM IVP  +   I A+++P+ I ++     ATV+   Y        K  +  I P  
Sbjct: 269 NGKLMIIVPLDEQLLIEARISPRDIAYIHPDQPATVKVTAYDYAIYGSLKGKVVSISPDT 328

Query: 375 SQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            Q +   + + YY V +K    A    +     +  G  A V     + T+   +I P  
Sbjct: 329 IQDEVKPE-EFYYRVFIKTETDALFNKTGERFPIVPGMVATVDIHTGSKTVMDYLIKP-- 385

Query: 432 DNWPKIFE 439
             + +  E
Sbjct: 386 --FNRARE 391


>gi|255065937|ref|ZP_05317792.1| LapA secretion membrane fusion protein [Neisseria sicca ATCC 29256]
 gi|255049848|gb|EET45312.1| LapA secretion membrane fusion protein [Neisseria sicca ATCC 29256]
          Length = 408

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 63/409 (15%), Positives = 139/409 (33%), Gaps = 66/409 (16%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    +E     +G ++       I+S  +G+I +  V+ G  + +   LL  +D  + 
Sbjct: 46  WAYNSTVEEVTRGNGNVIPSSREQVIQSLDAGVITQMMVKEGDLVEKDQILLKLDDTRSL 105

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            ++   +  ++NL   I   K+                     +       + ++ S   
Sbjct: 106 AVLRESEAKVQNLEATIARLKA---------------------EAYGGKLTFPNSVSPEL 144

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               ++ Y + +  +T             +    L    ++  +++ +   +  +  +S+
Sbjct: 145 RRRETAAYNARRQAMT-------------DAVQSLVQSKAALDREIAITAPMVAQGVMSE 191

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L +  R     TL++ E                         Y  + + +L Q++   
Sbjct: 192 VELLKMRRESSDLTLQIAE---------------------RRNRYRTDANNELVQSESEL 230

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A     + +     ++  I SP+ G +   +  +        + +M+IVP      + A 
Sbjct: 231 AQSKENMAMRADPVDRSQIRSPMRGIVKNIKINTIGGVVNPGEEIMQIVPVDDKLLVEAY 290

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT--------QE 385
           + P+ I  V+ G  A V+   Y        +  +  +           +         Q 
Sbjct: 291 IRPQDIAFVRAGQPALVKVSAYDYSIYGGLEGKVTLVGADTVSNSMQSRANDLKLDPNQV 350

Query: 386 YYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           YY VI++  + A  D N   + +  G  A V       T+ Q +I PIT
Sbjct: 351 YYRVIVQTENNALKDKNGKDMPIIPGMVATVDIKTGEKTIFQYLIKPIT 399


>gi|288960977|ref|YP_003451316.1| type I secretion membrane fusion protein [Azospirillum sp. B510]
 gi|288913285|dbj|BAI74772.1| type I secretion membrane fusion protein [Azospirillum sp. B510]
          Length = 443

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 60/441 (13%), Positives = 147/441 (33%), Gaps = 14/441 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           +     + L      S +R+ L     ++ L  W+ + P++++ ++SGE++    V  I+
Sbjct: 13  VSPLPSRPLPSRPLPSRRRIALEIAAVLLALGAWAAVGPLDVATTASGEVVPASRVKAIQ 72

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
               GI+ +     G ++ +G PL   +  +           + +LR         +D  
Sbjct: 73  HLEGGIVTEILASEGDRVSRGQPLFRLDPTKAQAEAVELARRLASLR---------IDLA 123

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               ++ +    S + +      +  +    +F      +    + +   +        +
Sbjct: 124 RLTAEIAKAPAPSIDPEAEATAPEVAAAARDLFLSHRDRLAHEARSQAQLVAQKEAELEE 183

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              +    R  L      +T+ +NL  K   ++    +Q R        +  +   Q  +
Sbjct: 184 SRVRLRNNRRALEIVNTQVTISENLLSKELSNRMTHLEQLRQQQALRTLVDGDQAAQPRL 243

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              + E  +       +  ++   DL   ++ + +   ++  L    E+  + +P+ G +
Sbjct: 244 EAALGEARERLAWVEGSAAEQARHDLATVRQQYDELSQRMQTLRNVEERTVLRTPVDGIV 303

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 +     Q  Q L ++VP      + A++  + I +V  G    V          
Sbjct: 304 KTVNVTTEGGVVQPGQVLAEVVPGEDRLVVDARLPVQDIGYVHAGLPVRVVLSSGDASSF 363

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                 +E++ P  +   +      +Y V +     AF       +L  G          
Sbjct: 364 PPIDGRVERVSPDATMTSD---GHAFYRVRVATEQSAFEATGRRYQLYPGMQVTCSILIG 420

Query: 419 NTTLAQEIIHPITDNWPKIFE 439
             T+ + ++ P        F+
Sbjct: 421 RRTVLEYLLSPWITTLRFAFQ 441


>gi|117926266|ref|YP_866883.1| HlyD family type I secretion membrane fusion protein [Magnetococcus
           sp. MC-1]
 gi|117610022|gb|ABK45477.1| type I secretion membrane fusion protein, HlyD family
           [Magnetococcus sp. MC-1]
          Length = 443

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 58/417 (13%), Positives = 144/417 (34%), Gaps = 13/417 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L    +I L  W+    +++   ++GE++    +  ++    GI++   V+ G ++  G 
Sbjct: 34  LFFGFVISLGVWAYFGVLDVVTFTTGEVVPSSQIKHVQHLEGGILRVIHVKEGEEVKLGQ 93

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
           PL+  E I     +      +  L+         LD + +       A      +L+   
Sbjct: 94  PLIELESIADESDLSELTARMVGLQ---------LDIIRHDAAAKLAAHPDYPPELVSKY 144

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            +       +F    S+++      L   +       ++  +    R  +    + + + 
Sbjct: 145 PQLVKQSRALFEARASTLHGEKVEMLNHYKENESLLGEIRARLRNSRERMKFLHEQVKIS 204

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           +NL +    S+ D     R   K   ++ E+          + ++ +        ++++ 
Sbjct: 205 ENLLKDELTSRLDHLALLRQERKLQSDIDEDEAGITGQQSKLRQIENGIQTLENRFVEQA 264

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
             + ++ ++T ++   +L   +    +  + +P  G +    + +        + +M IV
Sbjct: 265 KTEADKARQTLSELSHRLRKFDDRAARTILRAPANGVVKAILNNTVGGVVGAGETVMDIV 324

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P      +   ++P  + HV+ G    +       +R  +  A +  I P     + N Q
Sbjct: 325 PMDDRLIVEGHLSPGDVGHVQIGQKGYITLASREGVRYGRLNAEVVHISPDTFTNERNQQ 384

Query: 383 TQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           T  YY+V ++     F       EL  G             +    + P+     + 
Sbjct: 385 T--YYKVRMQTEGSTFVQGKYRYELYPGVQVTAAIRTSERRVIDYFLEPLMLGQSRA 439


>gi|294012214|ref|YP_003545674.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292675544|dbj|BAI97062.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 424

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 65/416 (15%), Positives = 148/416 (35%), Gaps = 19/416 (4%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           K++ L S  G++  + W+ L P++      G ++       I+S     I++  V +G +
Sbjct: 16  KQVILYSGGGMLVFLMWASLAPVDEVTHGQGRVIPSSKAQVIQSAEPTTIEEILVRSGQK 75

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L+  +D      +   +   ++L       +   +             E  +EQ
Sbjct: 76  VSKGQLLVRLDDAMLASELGQIQAETRSLTAR--AGRLEKEGTGEGAACTTGGPECAQEQ 133

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            L          + V    + S   +L  ++ + R       + +     L   +   ++
Sbjct: 134 AL----------AAVRQSALRSKQDALSAQVDQRR---RELGEAQATIDSLGGSVQLARQ 180

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            + M++ L  K+ + Q +L    R +  +   L     +       I E   + +     
Sbjct: 181 RVAMLEPLAAKSIIPQTELLDARRDLVDAQGRLNAAQQQASRAAAAIREAQAQQSEANYQ 240

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           + ++   +  Q +   A     L   +   ++  I SP+ G +   Q  +   Y    Q 
Sbjct: 241 FRQDALNERSQLEAKIAVNSESLRGAKGRAQRAEIRSPVDGVVNDVQVTTIGGYVSPGQK 300

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +M+IVP      + A+V P  I  +K G  A V+   Y           ++++       
Sbjct: 301 IMQIVPVGDKLLVEARVKPNDIAFIKTGDRAVVKVTAYDFSIYGGLTGTVQQVSADSVYD 360

Query: 378 DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           +     + Y+ V+++     L    + + +  G   +V       ++   ++ PI 
Sbjct: 361 EATR--EAYFTVVVETDRAWLGSGAHKLPITPGMVCDVEILTGRKSVLAYLLKPIM 414


>gi|296101405|ref|YP_003611551.1| type I secretion membrane fusion protein, HlyD family [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295055864|gb|ADF60602.1| type I secretion membrane fusion protein, HlyD family [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 450

 Score =  263 bits (672), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 64/439 (14%), Positives = 151/439 (34%), Gaps = 64/439 (14%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           MH      + +  P S+  +  ++++ ++ L+  +    +E      G+++       I+
Sbjct: 59  MHDLQGALIAQKTPFSMIMLYTITLVVVVALVW-AHFARVEEITRGDGKVIPASREQLIQ 117

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--D 118
           S   GI+++  V+ G  + +G  LL  +              ++ L+  I   ++     
Sbjct: 118 SLEGGILEELNVQEGDIVEKGQILLKIDPTRAGASYGESLSKVQGLKGSIARLRAEAYDT 177

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L    D+       R+E             ++ +N  + ++  S++             
Sbjct: 178 PLTFPPDIAGIESIVRDE-------------TQAYNARLKTLNESVEA------------ 212

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
                    L+  L+  Q ++++ + L  +  +S  ++ + +R                 
Sbjct: 213 ---------LKRSLTLAQNEVSLSEPLARRGLMSDVEILRLKR----------------- 246

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                 NE   +       +  + + +L + +   A     L   +    + T+++P+ G
Sbjct: 247 ----QANEFSLQITERTNRFRSDANSELNRLESELAQAEEILRGRQDVMNRTTVVAPVRG 302

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T+   +  +     QQ   +M ++P      + AK+ P  +  +  G  ATV+   Y   
Sbjct: 303 TVNNIRVTTRGGVIQQGAEIMTLIPLEDNLLVEAKIKPSDVAFIHPGLPATVKITAYDYA 362

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQE----YYEVILKITDLAF--SDNNIELRNGFPAE 412
                  ++E +       +   +       YY V ++    A    D +  +  G  A 
Sbjct: 363 IYGGLNGVVEHLSSDTLIDEEKARQGRGDSTYYRVFVRTDRAALQVKDKSFPIMPGMVAN 422

Query: 413 VLFTAKNTTLAQEIIHPIT 431
           V       T+   I+ PI 
Sbjct: 423 VEIRTGEKTILSYILKPIL 441


>gi|115358337|ref|YP_775475.1| HlyD family type I secretion membrane fusion protein [Burkholderia
           ambifaria AMMD]
 gi|115283625|gb|ABI89141.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria AMMD]
          Length = 408

 Score =  263 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 57/412 (13%), Positives = 133/412 (32%), Gaps = 18/412 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + L PI  +V + G +  E     ++    GI+K+  V +G ++  G  L+  +++    
Sbjct: 3   AALAPISGAVVAEGSVRTEGERKTVQHLEGGIVKQILVRDGDRVKAGQVLVVLDNVSPAA 62

Query: 95  LIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +   +      +     +  E+   + L     + ++  + R  +LL           +
Sbjct: 63  ELSALQAQFDAEQAKIARLSAERELKETLAFPAALEKQRDDPRVAELLARESSLFIARRR 122

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            F    + +       L + R        L      +       ++     + L ++  V
Sbjct: 123 AFADQSTMLRTE----LAQTRQEIAISSQL---IQTMNRSYDMARQQRRTNETLQQEGFV 175

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++  +    R    +   ++    +     +   +L         +Y+K     L++   
Sbjct: 176 AETKVLDLRRAEADALSRVQSGAADLSRAKQRQTDLELRIAGLRHDYVKAADDQLKEATT 235

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                  +L        +  + +P+AG IV  +  +        +P++ +VP      + 
Sbjct: 236 RAIQIGERLRPARDQSARTRVTAPVAGVIVGLKVHTIGAVIAPREPIVDVVPEGAPLIVE 295

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A + P  ++ +  G  A VR   Y           +  I        +      +Y V +
Sbjct: 296 ANIRPDDVREIAPGSHADVRLTAYNSRTTPMLDGKVTYISADALTDSDKRT--RFYVVRV 353

Query: 392 KITDLAFSDNN------IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           ++   A    N      + L  G   EV       +    ++ P+ D   K 
Sbjct: 354 EVPAQALERANRLAKEPVALGPGLRTEVYIRTHARSAFDYLLEPVRDGIRKS 405


>gi|149926424|ref|ZP_01914685.1| Type I secretion membrane fusion protein, HlyD [Limnobacter sp.
           MED105]
 gi|149824787|gb|EDM84001.1| Type I secretion membrane fusion protein, HlyD [Limnobacter sp.
           MED105]
          Length = 452

 Score =  263 bits (671), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 140/397 (35%), Gaps = 14/397 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +      ++    +  I++   G+I +  V  G  +  G  L+  +    +  +  K+ 
Sbjct: 67  QAAHGEARVVPSQRLQVIQAVDGGVINQVFVREGQLVKAGDKLVQIDITRFSSSLKEKEA 126

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
              + +     E   +  LNN    +  +   +   L     K   T  + +        
Sbjct: 127 VDASFQFR---EARLMAQLNNTTPNIPASLIQQYPDLYLQESKLLQTKLQEWASQTQIYE 183

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           + L  +   +        + ++ ++  +  L   +++L+ M+ L +  AVS  ++ + ER
Sbjct: 184 QQLDQRQRELD-------EAQSNATAAKRNLEISEQELSSMRPLLKSGAVSPVEVLRLER 236

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V K+  +      +   +   I E  ++        + E   +L + +   A       
Sbjct: 237 DVAKAKGDYEGAKAQTSRLYSAIREAREKIEETRLKQINEARTELSEVKARLASLEQNQI 296

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
            L     Q T+ +P+ G +      +        + +++IVP  +      ++ PK I  
Sbjct: 297 ELTDRVNQATLKTPVDGLVQRVLYNTRGAVVPAGKEVIEIVPIDEQLVFETRINPKDIAF 356

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           ++    A +R   Y        +  +E I       +     + Y+ V +K+  L  ++ 
Sbjct: 357 IRPKQIANIRVTAYDYSIYGGLEGTVESISADSLLDE---FGRPYFSVKVKVPRLNVNEK 413

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
            I L  G  A V    ++ T+   +  P+     + F
Sbjct: 414 -IRLMPGMVANVSIETEDRTVLSYLTKPVIRGSIQAF 449


>gi|312883070|ref|ZP_07742801.1| HlyD family type I secretion membrane fusion protein [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309369230|gb|EFP96751.1| HlyD family type I secretion membrane fusion protein [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 438

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 73/429 (17%), Positives = 169/429 (39%), Gaps = 16/429 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +  + ++SI+  +          ++ +  + G +  E N   I+    GI+    ++ G 
Sbjct: 21  VGMILIVSIVTFVLFGV-----ELDSAAIAKGRVNVEGNRKLIEHLEGGIVDNVLIKEGQ 75

Query: 77  QILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           ++  G  L+             ++ + +SI+  R  +++E+   D LN    +  K  + 
Sbjct: 76  KVNAGDQLIQLSANSIQTQVTQLEFRLLSIQAQRERLESERGNRDTLNFSDALKNKVEQY 135

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                +    K         +    +V ++   ++    ++ + +++ + K+        
Sbjct: 136 PNLIGILETQKLLFLSRSELHNSEQAVLKARFQRVESQEAMLVQQIETKQKA------YE 189

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++  M   L EK   S+    + +R +   + +L     ++K+      E+  + + 
Sbjct: 190 LLLQEFRMHDRLLEKGHSSRLKAIELKRKLNTISGDLIRIKGQKKDTHLSKLEVSQQQSA 249

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               ++ E+ ++L+   R   +   +L+ +++   + +I SP +G I+  + FS  +   
Sbjct: 250 NRNRFITEVEKELQDLNRVVEELSEELSRVKEILSRTSIRSPYSGKILGLKVFSKGDVIS 309

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             + LM+IVP      I+A + P  I  V  G  + VR   Y        +  +  I   
Sbjct: 310 PGETLMQIVPEDGRMVIKANLHPDYIDEVVPGQKSMVRLLSYNPRSVPMIEGEVVHIGAD 369

Query: 374 ISQQDNNLQTQ-EYYEVILKI-TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             +  +    +   YE+ + +  D   +   I L  G PAEV  T +  T  + +I PI+
Sbjct: 370 RLESSDLSSGELSGYEIKVVLNADEIAAHPQIGLYPGMPAEVYITLRKRTPFEYLIEPIS 429

Query: 432 DNWPKIFER 440
               +  +R
Sbjct: 430 IGLMRSMKR 438


>gi|261363638|ref|ZP_05976521.1| protein secretion ABC efflux system, membrane fusion protein
           [Neisseria mucosa ATCC 25996]
 gi|288568170|gb|EFC89730.1| protein secretion ABC efflux system, membrane fusion protein
           [Neisseria mucosa ATCC 25996]
          Length = 408

 Score =  262 bits (670), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 60/409 (14%), Positives = 134/409 (32%), Gaps = 66/409 (16%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    +E     +G ++       I+S   G+I +  V+ G  + +   LL  +D  + 
Sbjct: 46  WAYNSTVEEVTRGNGNVIPSSREQVIQSLDPGVITQMMVKEGDLVEKDQILLKLDDTRSL 105

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            ++   +  ++NL   I   K+                     +       +    S   
Sbjct: 106 AVLRESEAKVQNLEATIARLKA---------------------EAYGGKLTFPKNVSPEL 144

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               ++ Y + +  +T             +    L    ++  +++ +   +  +  +S+
Sbjct: 145 RRRETAAYNARRQAMT-------------DAVQSLVQSKAALDREIAITAPMVAQGVMSE 191

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L +  R     TL++ E                         Y  + + +L Q++   
Sbjct: 192 VELLKMRRESSDLTLQIAE---------------------RRNRYRADANNELVQSESEL 230

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A     + +     ++  I +P+ G +   +  +        + +M+IVP      + A 
Sbjct: 231 AQSKENMAMRADPVDRSQIRAPMRGIVKNIKINTIGGVVNPGEEIMQIVPVDDKLLVEAY 290

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT--------QE 385
           + P+ I  ++ G  A V+   Y           +  +           +         Q 
Sbjct: 291 IRPQDIAFIRAGQPALVKVSAYDYSIYGGLDGKVTLVGADTVSNSMQSRANDLKLDPNQV 350

Query: 386 YYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           YY VI++  +    D N   + +  G  A V       T+ Q +I PIT
Sbjct: 351 YYRVIVQTENNTLKDKNGKDMPIIPGMVATVDIKTGEKTIFQYLIKPIT 399


>gi|163795696|ref|ZP_02189661.1| RsaA secretion system, membrane protein RsaE [alpha proteobacterium
           BAL199]
 gi|159178992|gb|EDP63527.1| RsaA secretion system, membrane protein RsaE [alpha proteobacterium
           BAL199]
          Length = 457

 Score =  262 bits (670), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 76/440 (17%), Positives = 170/440 (38%), Gaps = 15/440 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           +  + KN + +  +S+    L+ ++   G   ++   P++ SV ++GE+  E++   ++ 
Sbjct: 21  YQEISKNARPHWASSITIGYLIVLVFFGGFGGFAAFAPLQSSVMATGELRVENSRKIVQH 80

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALD 118
           P  GI+ +  V  G ++ QG  LL  +          +  + +     +  +  E+ AL+
Sbjct: 81  PEGGIVAEINVREGQRVEQGEVLLRLDPTRDRAQSNTLRRRYLGALAEQARLLAERDALE 140

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            ++   +VL +  +    +L+D           VF    +S    +K+ L+++       
Sbjct: 141 SIDFPKEVLNELGDPEIAELVD-------GQRAVFRSRQASRDGLVKLMLSQVDQAKAQI 193

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
              + + S L+       ++L  ++ L+EK       L   +R       +         
Sbjct: 194 NATKVELSALQTQADLIAQELGSVRELYEKGLERLPRLLSLQRTQAAIRGQTGRLNGSIA 253

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
              + I+E          +  +E++  L+       D   +  ++  +  +  I +P  G
Sbjct: 254 QYEKQISEFEQRVVQMERDLQREVAVQLDAVGARLQDLNEQRPVISASVRRLDIRAPRTG 313

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG-YTATVRFPHYAD 357
            ++    F+        +PLM+IVP  +   +  KV P+ I  +  G     VR   ++ 
Sbjct: 314 RVIDLHVFTIGQVIGGREPLMQIVPEDEDLVVYVKVKPRDIDSLNNGVTKVQVRMTSFSQ 373

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLF 415
                 +  +E I     Q  +   +  YY  I+++   +     ++  L  G PA  + 
Sbjct: 374 RFTHPIEGYLESISSDSVQDPDG--SPPYYRAIIRLDATSREHILHDTALTAGMPAMAMI 431

Query: 416 TAKNTTLAQEIIHPITDNWP 435
                TL   +I P++ +  
Sbjct: 432 GVGEKTLLTYLIEPLSRSIS 451


>gi|27380580|ref|NP_772109.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110]
 gi|27353745|dbj|BAC50734.1| blr5469 [Bradyrhizobium japonicum USDA 110]
          Length = 416

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 59/408 (14%), Positives = 139/408 (34%), Gaps = 49/408 (12%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            +TW+    ++     +G ++    +  ++S   GI+    V+ GS + QG  L+  +D 
Sbjct: 37  FLTWAHFAVLDEVKRGNGRVVPARQMQVVQSLEGGIVGDILVQEGSIVQQGQSLMRIDDT 96

Query: 91  ETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +        +     +      ++ E      L               +QL   +    +
Sbjct: 97  KFASEFGEIRERRAAMAARVTRLEAEARGKGELIFP------------DQLDQVVPSAVA 144

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           T S VF      + + + +              L  + + L   L    ++L + + L+E
Sbjct: 145 TESSVFKMRAQKLAQDVDV--------------LNQQVARLGGTLKLLDRELALTRKLYE 190

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  V + ++ + +R              +   M   + E   +     +++  +   DL 
Sbjct: 191 QKVVPEIEMLRLDR--------------QATEMRGQLAEAQSKIASTVSSFRSQADEDLA 236

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           +++   A     +   +    +  + +P+ G +      +     Q    +M IVP    
Sbjct: 237 KSKGDLAVLDENIKSAQDRVRRTDLKAPVHGIVNKLNVTTVGAVVQPGANVMDIVPLDDT 296

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT---- 383
             +  ++ P+ I  ++ G  A V+   Y        K  +E+I       D   +T    
Sbjct: 297 LLVEGRIKPQDIAFIRPGQDAVVKISAYDSSVYGSLKGKVERISADTIVDDKAEKTPDRQ 356

Query: 384 QEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           + +Y V+++     L      + +  G  A V       ++   ++ P
Sbjct: 357 ESFYRVMVRTEKNHLGTEQKPLPIIPGMIATVEVLTGEKSVLDYLVRP 404


>gi|221134351|ref|ZP_03560656.1| membrane-fusion protein; multidrug resistance efflux pump
           [Glaciecola sp. HTCC2999]
          Length = 432

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 73/428 (17%), Positives = 162/428 (37%), Gaps = 22/428 (5%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            K+  P   +R   L ++ I+ LI W+ +  ++  V++ G+++  + V  I+    GII+
Sbjct: 12  QKQGEPNWRRRDVWLILLFIVALI-WASVAKVDRVVTAPGKVVPFNKVKVIQHLEGGIIE 70

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYD 125
              V++  ++  G PL+      +   +         ++ ++  +  E    +++ +   
Sbjct: 71  TLYVQDNQRVAAGDPLIELNLASSGVNVPELMARFGVLQIIQKRLMAETQGTEYVVD--- 127

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                       L D + +        F    + +   +     +++       +L+ K 
Sbjct: 128 ----------NDLPDNIRQSGLAEKNTFKSRTNELNEVVSALEQQLKQAEKRVAELQAKQ 177

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                 L   +K+L +  NL     VS+ +  Q+ R V     E+          L  + 
Sbjct: 178 QSQEQNLIIAEKELAISNNLVADKLVSELEHFQRLRAVETMKGEIAATTQAIAGALSVVV 237

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E       E A +++  S +L   +R  A    +L   ++ + +  I +PI G +   + 
Sbjct: 238 ESQGRIREEQARFVRRASDELGDIERQMASVNEELIRAKEQKARSVIRAPIDGFVKNIKY 297

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +  N  +  +P+M++VP      I  K++P     V +   A ++   Y   R      
Sbjct: 298 QAIGNVIKPGEPIMEVVPEKDRLVIEVKLSPVDRGFVIQDQEALIKISAYDYFRYGGIVG 357

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLA 423
            +E I           Q ++YY +I+  +       +  + ++ G   EV     + ++ 
Sbjct: 358 TVEGIAADT---TIGQQEEQYYRIIINASQAYVGAPEQQMLIKPGMTGEVAIKVDSQSVL 414

Query: 424 QEIIHPIT 431
             +I PI 
Sbjct: 415 WALIKPIL 422


>gi|167585110|ref|ZP_02377498.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ubonensis Bu]
          Length = 392

 Score =  262 bits (669), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 53/435 (12%), Positives = 134/435 (30%), Gaps = 59/435 (13%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             + + L     A  + +  +    +   + W+    IE        ++++     ++S 
Sbjct: 2   DDIREALLVRSSAGAQSVLYVVAAVLCAGLAWAGFARIEEVTRGEATVVSQSREQVVQSL 61

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GI+K   V  G  + +G  L   +           +     L+  +   ++       
Sbjct: 62  EGGIVKHIAVREGELVEKGQLLAKIDPTRAASSYRELRSKELGLKATLARLRAEA----Y 117

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +      +RE +L+      +    ++ + G+++                       
Sbjct: 118 GTPLAFPDEVTREPELVRQETAAYLARRRLLDEGVAA----------------------- 154

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                LR   +   +++ M   L  K  +S+ ++ +  R   +   ++ E          
Sbjct: 155 -----LRQSRALVSREVAMSAPLAAKGLISEVEILRMRRQAAELDAQIVE---------- 199

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                          Y  +   +L + +   A     L       ++  +++P+ G +  
Sbjct: 200 -----------RRNRYRSDAGTELARLEPELAQASESLVGRADVLDRTDVVAPMRGVVKN 248

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +     Q  + +M+I P      I A++ P  I  +  G    V+   Y       
Sbjct: 249 VRVHTPGAVVQPGEHIMEIAPAGDRLLIEARIRPSDIAFLHPGLPVLVKVSAYDFAIYGG 308

Query: 363 FKAIIEKIDPIISQQDN----NLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFT 416
               +  + P + + +           YY ++++    A   +   + +  G  A V   
Sbjct: 309 LSGRVVSVGPDVVKDEQRSAAGRPDATYYRLMVETDANALDVAGKRLPILPGMQATVDVR 368

Query: 417 AKNTTLAQEIIHPIT 431
               T+   ++ PI 
Sbjct: 369 TGEKTVLDYLLKPIF 383


>gi|308189202|ref|YP_003933333.1| type I secretion membrane fusion protein [Pantoea vagans C9-1]
 gi|308059712|gb|ADO11884.1| putative type I secretion membrane fusion protein [Pantoea vagans
           C9-1]
          Length = 393

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 62/437 (14%), Positives = 146/437 (33%), Gaps = 63/437 (14%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            R   +S   + +  +I ++    W+    ++      G+++   +   I+S   GI+K+
Sbjct: 14  SRQRVSSGGLIIMSVLIMLLLFFIWASNFELDEVTVGVGKVVPSSHEQIIQSLEGGILKE 73

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLK---KVSIKNLRCHIDTEKSALDFLNNKYDV 126
            +V  G  +  G  +   +  +    +        +       +  E +    +     +
Sbjct: 74  LKVHEGDVVEAGQVVALLDPTQIDSGVQESTSRLRAALATAARLQAETAGTPLIFPPEVL 133

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +    + E  L                                    +  R +     S
Sbjct: 134 ADPPLVAAETALY-----------------------------------HSRRENYSKTIS 158

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L   LS   ++L +  +L  K A S  ++ + +R       +L+  +++ +N       
Sbjct: 159 GLTEALSLINRELQLTSSLVAKGAASNVEVLRLKRQAN----DLQSKLNDAEN------- 207

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                     NY+ +   +L +     A + S +     + ++  +++P+ G +   +  
Sbjct: 208 ----------NYIVQAREELAKANAEAASQRSIIIGRADSLKRTVVVTPVRGIVKDIEVN 257

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +      Q   LM+IVP  +   I A++ P+ +  +  G  A V+   Y        +  
Sbjct: 258 TVGGVIPQRGNLMEIVPLDEQLMIEAQIAPRDVAFITPGQRAVVKLTAYDYNIYGGLEGK 317

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLA 423
           +  I P   Q + + + Q YY V ++               +  G  A       + T+ 
Sbjct: 318 VASISPDTIQDEVH-RDQYYYRVYIRTDKDYLVNKKGKKFPVYPGMIAMGEIHTGSKTIM 376

Query: 424 QEIIHPITDNWPKIFER 440
           + ++ P+      + ER
Sbjct: 377 EYLMKPLNRAKEALRER 393


>gi|239817561|ref|YP_002946471.1| type I secretion membrane fusion protein, HlyD family [Variovorax
           paradoxus S110]
 gi|239804138|gb|ACS21205.1| type I secretion membrane fusion protein, HlyD family [Variovorax
           paradoxus S110]
          Length = 410

 Score =  262 bits (669), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 63/422 (14%), Positives = 137/422 (32%), Gaps = 62/422 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +   R+     + ++    W+    I+   S  G+++       I+S   GI+ + +V  
Sbjct: 35  SGSARVVWFIALFLLAFFVWAWCFEIDEVSSGMGKVIPSSREQRIQSLEGGILAELRVHE 94

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAF 131
           G  + +G  L   +       ++      +        +  E      L    ++   A 
Sbjct: 95  GQIVEKGEVLAQLDPTRGESSVEETAARYRAALASSVRLRAEVEGHSTLQFPAELKAYA- 153

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                       +   + S +F     S+  ++                     S L   
Sbjct: 154 ------------QLVDSESALFRSRQGSMRDTV---------------------SGLGQA 180

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+  +K+L + ++L    A S  +L + +R      L++ E                   
Sbjct: 181 LALVRKELDITRSLQVSGAASNVELIRLQRQAADLELKISEA------------------ 222

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               +NY+     +L +         S +     + E+ T+ SP+ G +   Q  +    
Sbjct: 223 ---RSNYMVRSREELAKADAEVKSLSSVVRGRADSLERLTLNSPVRGIVKSLQVTTIGGV 279

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              +  L+ +VP      + A+++P+ I  ++ G  A ++   Y        K  +  I 
Sbjct: 280 VPPNGSLLTLVPLDDQLLVEARISPRDIAFMRPGQEAQIKVTAYDYAVYGGLKGRVVTIA 339

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQEIIH 428
           P   Q+D       YY V+++    A +D     + +  G            T+   +  
Sbjct: 340 PDT-QRDEVKPEIVYYPVLVRTDSDALTDKAGRRMPIVPGMVTTADIRTGRKTVWDYLTK 398

Query: 429 PI 430
           P+
Sbjct: 399 PL 400


>gi|78188717|ref|YP_379055.1| metalloprotease secretion protein [Chlorobium chlorochromatii CaD3]
 gi|78170916|gb|ABB28012.1| metalloprotease secretion protein [Chlorobium chlorochromatii CaD3]
          Length = 389

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 65/436 (14%), Positives = 129/436 (29%), Gaps = 78/436 (17%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R+  + ++    + ++G    + W+   P++  V   G +        ++    G ++  
Sbjct: 23  RDTRSPIRLGIWILLVGFGSFLLWASFAPLDEGVPCQGLVGIATKRKVVEHLRGGTVQAV 82

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVL 127
            V  G  + +G  L++ +        D        +R     + +E      +       
Sbjct: 83  HVREGEIVQEGQVLISLDSQTARARFDEIHQHYIGMRATADRLQSEMRGAGSIAFHP--- 139

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                       D L +   +  +       +++ S                        
Sbjct: 140 ------------DLLRESDKSLVRKNIENQKALFASR----------------------- 164

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            R  L    + L  +K+L  +     +     E                           
Sbjct: 165 -RQTLQILTEQLIAIKSLVSEGFAPLSQQRDLE--------------------------- 196

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                L+ A +    +  L Q Q     +  K   L        I SP +G +V  Q  +
Sbjct: 197 -----LKIAEFKSSTASQLAQVQLEVEADAEKSRALAAELADTEIRSPASGQVVGLQVQT 251

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  Q +M IVP  +   I AK+ P  I  V +G    + F  +A   +   +  +
Sbjct: 252 VGAVIQPGQKIMDIVPLDESLLIDAKIAPHLIDSVHQGLAVDINFSAFAHAPQLVVEGNV 311

Query: 368 EKIDPIISQQDNNLQTQE---YYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLA 423
           E +   I     +  TQ    YY   + +T          E++ G PA V+      +L 
Sbjct: 312 ESVSKDIVTDPPSSGTQPGASYYLARIAVTKEGLKQLGKREMQPGMPATVVIKTGERSLL 371

Query: 424 QEIIHPITDNWPKIFE 439
             ++ P+        +
Sbjct: 372 TYLLDPLMKRIHVSMK 387


>gi|222053472|ref|YP_002535834.1| type I secretion membrane fusion protein, HlyD family [Geobacter
           sp. FRC-32]
 gi|221562761|gb|ACM18733.1| type I secretion membrane fusion protein, HlyD family [Geobacter
           sp. FRC-32]
          Length = 391

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 141/432 (32%), Gaps = 61/432 (14%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR        +  + II +   + WS    I+ S   +G ++    V  I++   G++K 
Sbjct: 9   KRPALGGHSLILWVLIIALAVTVFWSSHYRIDQSARGAGTVIATSRVQVIQAVDGGVLKS 68

Query: 70  FQVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
            +V  G  + QG  L   +          +D +  ++      +  E +    +    ++
Sbjct: 69  LKVREGDSVKQGQVLAVLDQTRFAAQVMELDSRLAALHGQAARLRAEVTGASEIRFPTNL 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                  R  +LLD      +                              R  L+ +  
Sbjct: 129 ------GRFPELLDVQKALFT----------------------------QKRQSLDEELR 154

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L   +   ++D  ++  L +   VS++++ + ER +  +  +L                
Sbjct: 155 TLGVAVRLAREDARLVAELAKTGDVSRSEVIKAERALNDAEAQL---------------- 198

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                      Y ++   +L + +          T   +      + SP++G +   +  
Sbjct: 199 -----INRKNKYYQDARAELAKTEDDIGQNEQVRTPRAQQLADSVMRSPVSGIVKNVRVT 253

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +  + L++IVP   +  + AK+ P  I  VK    AT+RF  +           
Sbjct: 254 TQGGVLRAGEELLQIVPLDDVLIVEAKIRPSDIALVKPDLKATIRFDAFDYTMYGSVDGT 313

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLA 423
           +  +     +++       YY V +  +           +E+  G  A+V     + T+ 
Sbjct: 314 VSYVSADTIKEEGKTGELTYYRVHVATSAKPVKTTTGRTLEILPGMTAQVDIRTGDRTVL 373

Query: 424 QEIIHPITDNWP 435
             ++ P+     
Sbjct: 374 DYLLKPLRKTLT 385


>gi|317153169|ref|YP_004121217.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio aespoeensis Aspo-2]
 gi|316943420|gb|ADU62471.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio aespoeensis Aspo-2]
          Length = 474

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 67/454 (14%), Positives = 148/454 (32%), Gaps = 42/454 (9%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
            L     I    W+   P++I   + GE++    V  I+    GI++K  V  G  +  G
Sbjct: 19  YLCAGFCISFFVWASFSPLDIVSDAVGEVIPSSRVKRIQHLEGGIVRKIVVREGDLVEVG 78

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS-------ALDFLNNKYDVLEKAFESR 134
            PL+  E   +   ++   V + +L   I   ++        +D    +      A  S 
Sbjct: 79  QPLIELETTASDSTVEELNVRVSSLTAEIARLEAESRWFVVGVDAAAQEESADANATRSE 138

Query: 135 ------------------------------EEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                                          EQLL           +++          L
Sbjct: 139 DSGIEPLELPSVEVAGVGLRLDPFSVEIAFPEQLLHDAPGMADQARQLYEARRERFVNDL 198

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
             +  +++    +  ++  +    +  L   ++ + + + L +    ++       +   
Sbjct: 199 NAQREKIKQREQDVQEIFVRIRNQKQGLVYVREQIAISEELLKDKLTTRYKHLGFLKEES 258

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                ++E+          +    D  +  F ++ +E+   L +++R   +   +L  + 
Sbjct: 259 TLISRIQEDDAALARARSALVAARDSLDQIFNSFHEEVQETLRKSRRELLEFSQRLRKMS 318

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
            + E+  I SP  G +            Q    ++ IVP      I A +    I +V+ 
Sbjct: 319 DSLERTVIRSPANGIVKSIYIMGEGEVVQPGMTVLDIVPAGDKLVIEAHLALGDIGYVQV 378

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G +ATV             +  +  I P    +++      YY+V+++  +  F  +   
Sbjct: 379 GQSATVSLATGDARMFGHLEGTVATISPDAITKED---VGTYYKVLVETENDRFEKDGRR 435

Query: 405 --LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
             L  G    V       T+ + +++P  D    
Sbjct: 436 YQLYPGMRVLVGIKTGERTVMEYLVYPYFDTLYH 469


>gi|167588415|ref|ZP_02380803.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ubonensis Bu]
          Length = 412

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 58/416 (13%), Positives = 142/416 (34%), Gaps = 18/416 (4%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           L  W+ L P+  +V + G +  +     ++    GI+K  +V++G ++  G  L+  +++
Sbjct: 3   LAFWASLAPLSGAVVAEGVVRTQGERKTVQHQEGGIVKAIRVKDGDRVKAGQVLVVLDNV 62

Query: 91  ETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                +   +      +     +  E+   D L    D+  +  +    +LL       +
Sbjct: 63  SPAAELAALRAQRDAEQARIARLSAERELKDRLAFPADLTGRQHDPHVAELLQRESTLFA 122

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           T  + F   +S +   L      +                +    +   +     + L  
Sbjct: 123 TRRRTFQDQMSMLRAELAHTRQEI-------TVSAQLVQTMGGSHAMAVRQRETNEALNR 175

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  V+   +    R+   +   ++    E     +   +L  +       Y++    +L+
Sbjct: 176 EGFVADMKVLDTRRVEADALSRMQSAKAELSRARQRQVDLEMKIAGLRNEYIRTADDELK 235

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           +          +L   +    +  + +P+ GT+V  +  +        +P++ +VP    
Sbjct: 236 EATSRAFQLGERLRPAQDASIRAQVTAPVDGTVVGLRVHTIGAVVGPREPIVDVVPAGAP 295

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + A V P  ++ +  G  A VR   Y+       +  +  +        +      +Y
Sbjct: 296 LIVEANVRPDDVRAIVPGGHADVRLTAYSSRTTPMLEGRVAYVSADAL--TDKEARSHFY 353

Query: 388 EVILKITDLAFSDNN------IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
            V +++   A +  N      + L  G  AEV    +  +    ++ PI D   + 
Sbjct: 354 VVRVEVPADAVARANRLAAQTVSLGPGLRAEVYIRKQARSALDYLLEPIVDGMRRS 409


>gi|78186271|ref|YP_374314.1| Type I secretion membrane fusion protein, HlyD [Chlorobium luteolum
           DSM 273]
 gi|78166173|gb|ABB23271.1| Type I secretion membrane fusion protein, HlyD [Chlorobium luteolum
           DSM 273]
          Length = 468

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 56/422 (13%), Positives = 152/422 (36%), Gaps = 15/422 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + L   + +  ++ W+    ++  V+  G+++       I+S   GII+      G    
Sbjct: 59  LLLSITVFLAVMLIWASFAELDHVVTGQGKVVTPKQTQLIQSLEGGIIEHIYAREGDVAE 118

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G+ L++ +  +   L    +   + +   ++   +  +  +  +            +L+
Sbjct: 119 EGSVLVSLDPTQAKSLYGQAQKEERAIAVRVERLLAEKEERDPVFPF----------ELM 168

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               +  +     +    + +    ++   ++      R+  E +       L   + + 
Sbjct: 169 QEEPELIAAEQAQYRERKAVLDTEFQLLDAQVSQRREERMQAEAELHRATRELELARAEY 228

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            ++K+L ++   ++  L   +R   ++  +L +     K     + E          N++
Sbjct: 229 GLIKDLVDRRLEARLSLINVDRERNEALSQLNKAKVSLKRADAALAEGRFRLAQSRMNFM 288

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            ++  +  +     A+   KL  L     +  +++P+   +      +     Q  QP++
Sbjct: 289 SQVGNEYAEGVGRLAEVRQKLQGLSDRLNRTQLVAPVNAIVNKIHVRTEGGVVQPGQPIL 348

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           ++ P      I A +  K I  V  G T +V+   Y   R    K  +  I P   Q ++
Sbjct: 349 ELTPIDGKIEIEAAIQQKDIAFVHIGQTVSVKLTAYDFSRFGDIKGKVTVISPDAQQLED 408

Query: 380 NLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
               +E+++V +++      +      +  G  A V       T+ + ++ P+     + 
Sbjct: 409 ---GREFFQVRVELDQSYLENKGRHYPVTPGMAANVDMVIAKRTVMEYLMEPVFKLQDRA 465

Query: 438 FE 439
           F 
Sbjct: 466 FR 467


>gi|30248184|ref|NP_840254.1| putative hemolysin-type secretion transmembrane protein
           [Nitrosomonas europaea ATCC 19718]
 gi|30180069|emb|CAD84069.1| putative hemolysin-type secretion transmembrane protein
           [Nitrosomonas europaea ATCC 19718]
          Length = 390

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 60/428 (14%), Positives = 133/428 (31%), Gaps = 56/428 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           +   +  L +  +   + WS    ++      G++        I+S   GI+ +  V  G
Sbjct: 16  TASSILWLIVASMAIFLIWSYFAVLDEVAIGEGKVTPASKGQIIQSLEGGILSELVVHEG 75

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  L T +   +   ++     I  L+      ++ ++   NK DV      + E
Sbjct: 76  DVVENGQKLATLDPALSRSSVEEAAQKIIALQARAARLRAEIE---NKSDVTFPPELADE 132

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + +++   +   T  + F+  +S + R                             L   
Sbjct: 133 KAVIERERQLFRTDVQAFHENVSQLSRQ----------------------------LRLA 164

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+++ +   L +  A ++ ++ + ++   + + +L     +    L+             
Sbjct: 165 QQEIDIAMPLLKTGATNEVEILRLKQKAAELSTKLAATKGQYSVALKS------------ 212

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                    D           +           +  I SP  G +   +  +        
Sbjct: 213 ---------DYATTMADLGPLLKVREGRADQLRRTIITSPTRGIVKDVRVNTIGGVIGPG 263

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM+IVP      + A+++P+ I  +     ATV+   +         A ++ I P   
Sbjct: 264 GELMEIVPLDDQLLVEARLSPRDIAFIHPDQAATVKITAFEPSIYGTLAATVQNISPDTI 323

Query: 376 QQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           +   + +   YY V L                +  G  A         T+   +I P+  
Sbjct: 324 EDQVDKRL-YYYRVYLLTKHAYLETKDGKRHAIMPGMVATAEIRTGQKTVLDYLIKPLNR 382

Query: 433 NWPKIFER 440
               + ER
Sbjct: 383 AAEALRER 390


>gi|327393917|dbj|BAK11339.1| hypothetical protein PAJ_1259 [Pantoea ananatis AJ13355]
          Length = 471

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 70/421 (16%), Positives = 153/421 (36%), Gaps = 16/421 (3%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           HPA    M ++ I+ ++ LI+ S+   ++I V + G+++ +  V EI+   +G+++   V
Sbjct: 53  HPAPYWTMRIIVILTLV-LISISLFGRLDIVVVAKGKVIPDARVKEIQPAITGVVRHIYV 111

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           ++G ++  G  L+  +  +    +   + S       I   K+ LD         + +  
Sbjct: 112 DDGQRVNAGNVLMVLDSTQAEADLTKTEASRAESMLAIIRAKALLDA--------QISGH 163

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRS-LKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             E ++ D L +     +  F  GI   Y+  L      +                L++ 
Sbjct: 164 VPEMKVSDGLSQADVNATSRFADGIFMEYKDKLNRADAELTQHRDELATTLQDIERLKST 223

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               ++     K L + + V++ND   +E+       +L         +   I+    E 
Sbjct: 224 APLAREQANSYKLLAKDHYVARNDYLDKEQTALGQEHDLTAKRSHANELKAAIDAQIAEK 283

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               + + +E    LEQ ++     +      +  ++   ++SP++GT+      +    
Sbjct: 284 ASVGSQFRREQLDALEQAEQKLKQSVEDEVKAKTRKQLLNLVSPVSGTVQQLSVHTIGGV 343

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              +Q +M+IVP      +   +  K I  +K+G  ATV+   +        K  +  + 
Sbjct: 344 VTSAQKVMEIVP-DDAMEVEVNIANKDIGFIKEGQNATVKIDAFPYTYYGYIKGNVISVS 402

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHP 429
               Q  N+      +   + +           I+L  G             + Q    P
Sbjct: 403 NDAVQDRNHGLN---FTARVHLDKSGIEAGGRWIKLTPGMTVSAEIKTGKRNVWQYFFDP 459

Query: 430 I 430
           +
Sbjct: 460 L 460


>gi|332184083|gb|AEE26337.1| Membrane-fusion protein [Francisella cf. novicida 3523]
          Length = 490

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 78/426 (18%), Positives = 161/426 (37%), Gaps = 11/426 (2%)

Query: 12  NHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
             P  L R  L  +I +I   + W+    I+I  +  G+I+   +V  I+S   G + K 
Sbjct: 60  KPPHPLLRTILYCLIFLIVFTVVWAYFCKIDIITAGQGKIIPAGDVKTIQSSEKGTVIKL 119

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN---KYDVL 127
            V++G  +  G  L+  E   T   I+  K  I+  +  I  E++    LN+   +   L
Sbjct: 120 NVDSGQIVKAGDILVVLESEYTESDINKLKEDIEFYKLRISREQTFYKMLNSGLKEQIPL 179

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           EK   +  + + D L     +   ++    S++ + + ++ T +       + L NK+  
Sbjct: 180 EKLDYNPPQDVTDEL-DIEQSRQLLWQEWQSTIAKLMTLEATMLSKEQEKEISL-NKTHQ 237

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L A +   ++ L     L++K AV++ +  +       +  EL     +   +   I E 
Sbjct: 238 LEATIKIIKEKLETYTKLYKKKAVARMEYLEFREKFINTYYELETEKKKDLQLDAEIAEA 297

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                   +    +    + Q+++       +L        +  I SPI G +   Q  +
Sbjct: 298 RSNLESYKSETYLKTLEKIRQDKKDLFSAEQELHKATTLNGKNIIRSPIDGVVHEMQIHT 357

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                  +Q LM+IVP  +       V  + I +++KG TA V+   +        +  +
Sbjct: 358 IGAVVTPAQVLMQIVPIDQKLEAEVYVKNEDIGYLRKGQTAEVKVNTFPFAEYGVLEGTV 417

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQE 425
           EKI     + +        Y++++ + +     +    ++  G             +   
Sbjct: 418 EKISGDAIEDERLGLV---YKLVISLNNNTLHKDGETYKIVPGMAVVAEVKTGTRRVIDF 474

Query: 426 IIHPIT 431
              P+T
Sbjct: 475 FTEPLT 480


>gi|193212502|ref|YP_001998455.1| secretion protein HlyD family protein [Chlorobaculum parvum NCIB
           8327]
 gi|193085979|gb|ACF11255.1| secretion protein HlyD family protein [Chlorobaculum parvum NCIB
           8327]
          Length = 392

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 62/439 (14%), Positives = 140/439 (31%), Gaps = 77/439 (17%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +    +  + ++   ++ IIG  G + W+   P++  V   G +        ++  + G 
Sbjct: 23  EPRHTDTRSPVRIGIIVLIIGFGGFLLWAAFAPLDEGVPCQGLVSIATKRKVVQHRYGGT 82

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           +    V+ G  + +G  L+  +D         I    + ++     +  E+     +   
Sbjct: 83  VTAVHVQEGQHVKKGDLLILLDDQTAKARYVEIHQHYLGLRAAEARLLAEERGASKMTLH 142

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D+L    +       + + +   T  ++    +                          
Sbjct: 143 PDLLSDPDQ-------ELVKRLVRTQKELLQSRM-------------------------- 169

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                  ++   Q  L  MK+L  +                         + +Q+++   
Sbjct: 170 ------EIMRLMQAQLAGMKSLAAEGFAP---------------------LSQQRDLEIR 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I +L  ++  E A    E+  D             K   L +      I SP  G +V  
Sbjct: 203 IAQLRADSQSELARVQNEVKAD-----------AEKSKALAQELADTRITSPADGQVVGL 251

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           Q  +     Q  Q +M +VP  +   I AK+ P  I  V+ G T  + F  ++   +   
Sbjct: 252 QVQTVGAVIQPGQKVMDVVPLDEPLLIEAKIAPHLIDKVRTGLTVDLHFTAFSHTPQMVV 311

Query: 364 KAIIEKIDPIISQQDNNLQTQ--EYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNT 420
              +E +   +  +  +       YY   + +T     +  + +++ G P   +      
Sbjct: 312 PGKVESVSSDLLTESPSGAQPAVSYYLARIAVTPEGMQELGDHKIQAGMPVLAVIKTGER 371

Query: 421 TLAQEIIHPITDNWPKIFE 439
           ++   I+HP+        +
Sbjct: 372 SMLTYILHPLMQRMAASLK 390


>gi|145219254|ref|YP_001129963.1| HlyD family type I secretion membrane fusion protein
           [Prosthecochloris vibrioformis DSM 265]
 gi|145205418|gb|ABP36461.1| type I secretion membrane fusion protein, HlyD family [Chlorobium
           phaeovibrioides DSM 265]
          Length = 468

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 55/422 (13%), Positives = 152/422 (36%), Gaps = 15/422 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + L   + +  ++ W+    ++  V+  G+++       I+S   GII+      G    
Sbjct: 59  LLLSITVFLAVMLIWASFAELDHVVTGQGKVVTPKQTQLIQSLEGGIIEHIYAREGDVAE 118

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G+ L++ +  +   L    +   + +   ++   +  +  +  +            +++
Sbjct: 119 EGSVLVSLDPTQAKSLYGQAQKEERAIAVRVERLLAEKEERDPVFPF----------EVM 168

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               +  +     +    + +    ++   ++      R+  E +       L   + + 
Sbjct: 169 QEEPELIAAEQAQYRERKAVLDTEFQLLDAQVSQRREERMQAEAELHRATRELELARAEY 228

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            ++K+L ++   ++  L   +R   ++  +L +     K     + E          N++
Sbjct: 229 GLIKDLVDRRLEARLSLINVDRERNEALSQLNKAKVSLKRADAALAEGRFRLAQSRMNFM 288

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            ++  +  +     A+   KL  L     +  +++P+   +      +     Q  QP++
Sbjct: 289 SQVGNEYAEGVGRLAEVRQKLQGLSDRLNRTQLVAPVNAIVNKIHIRTEGGVVQPGQPIL 348

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           ++ P      I A +  K I  V  G T +V+   Y   R    K  +  I P   Q ++
Sbjct: 349 ELTPIDGKIEIEAAIQQKDIAFVHIGQTVSVKLTAYDFSRFGDIKGKVTVISPDAQQLED 408

Query: 380 NLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
               +E+++V +++      +      +  G  A V       T+ + ++ P+     + 
Sbjct: 409 ---GREFFQVRVELDQSYLENKGRHYPVTPGMAANVDMVISKRTVMEYLMEPVFKLQDRA 465

Query: 438 FE 439
           F 
Sbjct: 466 FR 467


>gi|317047648|ref|YP_004115296.1| HlyD family type I secretion membrane fusion protein [Pantoea sp.
           At-9b]
 gi|316949265|gb|ADU68740.1| type I secretion membrane fusion protein, HlyD family [Pantoea sp.
           At-9b]
          Length = 410

 Score =  259 bits (663), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 65/429 (15%), Positives = 153/429 (35%), Gaps = 60/429 (13%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + +  P S+  +  L II +I  + W+    +E       +++   +   I+S   G ++
Sbjct: 27  ILQKTPKSM-LVLWLLIIVVISALVWAHFAVVEEVTKGEAKVIPASHEQTIESFEDGTLQ 85

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G  + +G PLL  +   +      +      L+  I   ++    L   +  + 
Sbjct: 86  ELYVKEGQLVEKGQPLLRLDSTRSEANYQEELSKSYGLQGAIARARAEAYDLPLDFPDVI 145

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           K F +  +                                   ++    R  L+   S L
Sbjct: 146 KDFHTIVQ--------------------------------DETKAYQTRRKLLDESISSL 173

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L   +K++ + + L ++  +S  ++ +  R      +++ +  +             
Sbjct: 174 THNLQLAEKEVNLSEPLAKRGLISDMEILRLRRQANDLRVQIADRTN------------- 220

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  + + +L + +  FA   ++L   +       I +P+ GTI   ++ + 
Sbjct: 221 --------KYRSDANSELTRLESEFAQVEARLVGRKDVINHALITAPVKGTINSIKNTTI 272

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +   + + +M ++P      +  ++ P ++  ++ G  ATV+   Y          +IE
Sbjct: 273 DSVISRGEQIMSLIPSEDNLLLETRIKPAEVAFLRPGLPATVKISAYDFAIYGGLHGVIE 332

Query: 369 KIDPIISQQDNNLQTQE----YYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
            I P     +  +++      YY V ++   TDL   D +  +  G  A V       T+
Sbjct: 333 SISPDTIIDETKMRSGREDATYYRVYVRTHGTDLHVKDKSFPIIPGMTASVEIKTGEKTI 392

Query: 423 AQEIIHPIT 431
              ++ P+ 
Sbjct: 393 LSYLLKPVL 401


>gi|144898254|emb|CAM75118.1| Type I secretion membrane fusion protein, HlyD [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 462

 Score =  259 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 63/424 (14%), Positives = 153/424 (36%), Gaps = 16/424 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++    L+       + WS L  ++    + GEIL   +V  ++    GI+ +  V+ G 
Sbjct: 50  IRLTIYLACAACAVFLVWSALTTVDEVAVAEGEILPLGSVKTVQHLEGGIVDEILVKEGE 109

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G P++     +    ++  +     L    +  ++   F+  +      A      
Sbjct: 110 LVEVGQPIIKLSPAQALAELEQTRAREMTLLLKSERLRA---FVEGRAPDFSFAGPQYRT 166

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            + D           +F     +   +  + L+++     +   +E++   LR  +++  
Sbjct: 167 LVQDNQS--------IFQAQSQARDTARSIILSQIDQKRSDLKLMESQHKSLREQVAALA 218

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +++ +   L  K  V++       R + ++  EL   + +     + ++E+ +      +
Sbjct: 219 EEMKIRDELVAKGLVTRITHLDTRRELARAEGELTRILGQTVTARQAVSEMENRLIDSQS 278

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              K+   ++  +    A     ++ LE    +  I SP  G I      +     Q   
Sbjct: 279 ALQKQNMDEMGVSIAELAQVQETISRLEDRVTRLIIESPSHGYIKGLTVKNQGAVIQPGG 338

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            + +IVP ++   + AKV P+ + H+  G    ++   Y   R       +EK+      
Sbjct: 339 LVSEIVPVNRELRVEAKVLPRDVGHLHVGQKVRIKVTTYDFARYGSIMGKLEKLSASTFL 398

Query: 377 QDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
              N + + +++  + +    +     N  +  G          + TL Q ++ PI    
Sbjct: 399 ---NEKGEPFFKAQVSLEQNYVGSDPGNFVVTPGMTVSAEIITGDKTLFQYMLKPIFTQL 455

Query: 435 PKIF 438
            + F
Sbjct: 456 QQSF 459


>gi|307295607|ref|ZP_07575443.1| type I secretion membrane fusion protein, HlyD family [Sphingobium
           chlorophenolicum L-1]
 gi|306878646|gb|EFN09866.1| type I secretion membrane fusion protein, HlyD family [Sphingobium
           chlorophenolicum L-1]
          Length = 424

 Score =  259 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 64/416 (15%), Positives = 147/416 (35%), Gaps = 19/416 (4%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           K++ L S  G++  + W+ L P++      G ++       I+S     I++  V +G +
Sbjct: 16  KQVILYSGGGMLVFLMWASLAPVDEVTHGQGRVIPSSKAQVIQSAEPTTIEEILVRSGQK 75

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L+  +D      +   +   ++L       +   +             E  +EQ
Sbjct: 76  VSKGQLLVRLDDAMLASELGQIQAETRSLTAR--AGRLEREGTGEGAACTTGGPECAQEQ 133

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            L          + V    + S   ++   + + R       + +     L   +   ++
Sbjct: 134 AL----------AAVRQSALRSKQDAMSAAVDQRR---RELGEAQATIDSLGGSVQLARQ 180

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            + M++ L  K+ + Q +L    R +  +   L     +       I E   + +     
Sbjct: 181 RVAMLEPLAAKSIIPQTELLDARRDLVDAQGRLNAAQQQASRAAAAIREAQAQLSEANFQ 240

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           + ++   +  Q +   A     L   +   ++  I SP+ G +   Q  +   Y    Q 
Sbjct: 241 FRQDALNERSQLEAKIAVNSESLRGAKGRAQRAEIRSPVDGVVNDVQVTTIGGYVSPGQK 300

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +M+IVP  +   + A+V P  I  +K G  A V+   Y           ++++       
Sbjct: 301 IMQIVPVGEKLLVEARVKPNDIAFIKTGDRAVVKVTAYDFSIYGGLTGTVQQVSADSVYD 360

Query: 378 DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           +     + Y+ V+++     L      + +  G   +V       ++   ++ PI 
Sbjct: 361 EATR--EAYFTVVVETDRAWLGSGARKLPITPGMVCDVEIMTGRKSVLAYLLKPIM 414


>gi|288961985|ref|YP_003452295.1| type I secretion membrane fusion protein [Azospirillum sp. B510]
 gi|288914265|dbj|BAI75751.1| type I secretion membrane fusion protein [Azospirillum sp. B510]
          Length = 440

 Score =  259 bits (662), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 62/409 (15%), Positives = 152/409 (37%), Gaps = 16/409 (3%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           TW+ L+P+  +V ++G+++   N   ++    GI+    V+ G  +  G PL+ F+  + 
Sbjct: 40  TWATLMPVREAVVTAGQVVPSGNAQVVQHLEGGIVSSILVKEGDLVEAGQPLVVFDPKQV 99

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               +     +  L    +  ++           +      + E  +      + T  + 
Sbjct: 100 QAEREQMNARLLTLELRAERLRAFAAGRAPDLAGVAGPDSPQTEAQIADQRLIYETQRQA 159

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            +  I+ +   +  +   +        +++++ +L+   +    K       L      S
Sbjct: 160 RDTAIAVLRAQVSQREAELALYQGQLANIKDQIALITGSVDIRNK-------LESMGLSS 212

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +    + +R   +   E R    +     + I E  +    + A   ++   ++      
Sbjct: 213 KLQSLETQREQSRLMGEQRRIEGQLIATQQAITEAGNRILDQSAKLSQDAVNEMGTVTAE 272

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A        L+   ++ ++LSP+ G +   +  +      +   LM+IVP      + A
Sbjct: 273 IAQLREARGKLDDRVQRLSVLSPVRGLVQDLRVNTIGAVVPEGGVLMQIVPVDHEMTVEA 332

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            VTP+ + H++ G  ATV+   Y   R       +++I       +   Q + YY+ ++ 
Sbjct: 333 HVTPRDVGHLQVGQEATVKVLTYDFARYGAITGTLQRISATTFLDE---QRRPYYKAVVA 389

Query: 393 ITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI----TDNWP 435
           ++   +   D    +  G   +V       +L + ++ PI    +D++ 
Sbjct: 390 LSRNHVGRDDARHPVLPGMTTQVELATGERSLLEYLLKPIYFALSDSFN 438


>gi|39995386|ref|NP_951337.1| HlyD family secretion protein [Geobacter sulfurreducens PCA]
 gi|39982148|gb|AAR33610.1| secretion protein, HlyD family [Geobacter sulfurreducens PCA]
 gi|298504387|gb|ADI83110.1| efflux pump, RND family, membrane fusion protein [Geobacter
           sulfurreducens KN400]
          Length = 390

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 56/436 (12%), Positives = 150/436 (34%), Gaps = 57/436 (13%)

Query: 5   MWKNLKRNHPASLKRMTLLS-IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           M   +++     ++ + L + ++  I    W+ +  ++ +    G +++   V  I++  
Sbjct: 1   MNDAMEQTSAKPVRSVLLWAFVVAFILFFIWAYVYRVDQTTRGIGSVISSSRVQVIQAVD 60

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G+++  +V+ G ++ +G  +   +   +   +      +  ++      ++        
Sbjct: 61  GGVLQSLKVKEGDRVRRGQVVALLDQTRSGASVRELDARLAAMKAQSARLRA-------- 112

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +VL     +   +L  F  +       +F+    S+   L                   
Sbjct: 113 -EVLGSPSVAFPPELRGF-PELVKVQQALFDQRRQSLREEL------------------- 151

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               L   +   ++D  ++  L +   VS++++ + ER +  +  +L             
Sbjct: 152 --RTLDVAVKLAREDAHLVAQLAKTGDVSRSEVIRSERALNDAEAQL------------- 196

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                         Y ++ S +L + +          T   +      + +P+ G +   
Sbjct: 197 --------INRKNKYYQDASAELAKIEDEINQNEQVRTQRNQQLFDSVMKTPVDGIVKNV 248

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +     +  + LM+IVP      I  KV P  I  ++ G  A +RF  +        
Sbjct: 249 RVTTQGGVLRSGEELMQIVPLDDKLIIETKVKPSDIAQIRPGLPAAIRFDAFDYTIHGAV 308

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDL----AFSDNNIELRNGFPAEVLFTAKN 419
              +  +     ++++    Q YY V ++I         +   +++  G  A+V     +
Sbjct: 309 DGTVAYVSADTIKEESKAGEQTYYRVHVEIAGSNPVRTRTGKQLDIIPGMTAQVDIRTGS 368

Query: 420 TTLAQEIIHPITDNWP 435
            T+   ++ P+     
Sbjct: 369 RTVLDYLLKPLRKTMT 384


>gi|294013473|ref|YP_003546933.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292676803|dbj|BAI98321.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 453

 Score =  259 bits (662), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 61/431 (14%), Positives = 134/431 (31%), Gaps = 8/431 (1%)

Query: 14  PASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P    R  LL         + W+    ++ +  + G          ++    GI+    V
Sbjct: 24  PRPEVRGGLLVAAAFFLLFLGWAAFARLDAAALAPGRTTVAGQRQSVQHRDGGIVAAILV 83

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G  + QG  L+            +       L       ++    +  +  V  +   
Sbjct: 84  KEGQTVRQGEVLVRLAVPAVAAQERVLASQAIWLIAQRARLRAEQVGVGMETPVEFRNLT 143

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             +                      + +     + +               + + +    
Sbjct: 144 GDDRA---DAQAAMRAQRAQMAARSALLGTQQGVAMHEGSQAGSQAAGYREQVASVIEQE 200

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
                +L  ++ + EK  VS+  +   ER       +       + +    + E   +A 
Sbjct: 201 RLITDELESLRTVAEKGFVSKTRIRALERAKADLIGQRGRLRAARDSAANMVGEARLKAL 260

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
               N  ++I+ +L   Q    D + K         +  + +P++GT+V     +     
Sbjct: 261 EAKQNLEEKIASELRDTQALLGDVLPKWGAARDELARTQVRAPVSGTVVGLGVHTVGGVI 320

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              Q LM IVP      I A+ +P  +  +  G  A +RF  +        +  + +I  
Sbjct: 321 AAGQTLMDIVPGHSAVVIEARFSPTDVDDLAVGQKAEIRFAGFPGRSLPIIEGKVTRISA 380

Query: 373 IISQQDNNLQTQEYYEVILKITDLAF----SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
               ++         EV +    +A      + +  ++ G P EV+   +  T  Q ++ 
Sbjct: 381 DSFVEEKTGIAYFAGEVTIAPDQIALIRRYREGDFAMKPGMPVEVVVPLRRRTALQYMVD 440

Query: 429 PITDNWPKIFE 439
           P+TD+  + F 
Sbjct: 441 PLTDSMWRSFR 451


>gi|325168920|ref|YP_004280710.1| type I secretion membrane fusion protein, HlyD family
           [Agrobacterium sp. H13-3]
 gi|325064643|gb|ADY68332.1| type I secretion membrane fusion protein, HlyD family
           [Agrobacterium sp. H13-3]
          Length = 400

 Score =  259 bits (661), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 60/428 (14%), Positives = 132/428 (30%), Gaps = 61/428 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
               R+  L +  ++ ++ W+    ++   +  G ++       I+S   GI+    V  
Sbjct: 26  TRSTRVVQLFVALLVAMLVWAYFATLDEVSTGDGRVIPTSREQVIQSLEGGIVATLHVRE 85

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              +  G  L   +   +   ++      +         ++ ++     +          
Sbjct: 86  DQVVEPGQILAQLDPTRSESDVEESAAKYRATLAAAARLEAEVNGTPLTF---------- 135

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
               L+       + ++++                        R  LE     +   LS 
Sbjct: 136 -PAALNAYPGLTGSETELYTAR---------------------RHALEESLRWIEESLSL 173

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
              +L + + L    A S  ++ +  R                      I EL  +    
Sbjct: 174 VASELKLNEELRSIGAASNVEVIRLRR---------------------QIVELELKKVEI 212

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            + YL +   +L +           +T    +  + T  SP+ G +   +  +       
Sbjct: 213 KSEYLVKAREELTKANAEVNSLSPVVTGRADSLARLTHRSPVRGIVKNIEVSTIGGVVPP 272

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           +  LM I+P      I A+++P+ I ++  G  A+V+   Y           +  I P  
Sbjct: 273 NGKLMDIIPLGDELLIEARISPRDIAYIHPGQRASVKISAYDYAVYGSLDGKVTTISPDT 332

Query: 375 SQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            Q + + +   YY V +K    A    +     +  G  A V       T+ + ++ P  
Sbjct: 333 IQDEVDREI-YYYRVFIKTEKDALVNAAGREFPIVPGMVANVDIHTGEKTVLEYLVKP-- 389

Query: 432 DNWPKIFE 439
             + K  E
Sbjct: 390 --FNKARE 395


>gi|237747661|ref|ZP_04578141.1| secretion system protein D [Oxalobacter formigenes OXCC13]
 gi|229379023|gb|EEO29114.1| secretion system protein D [Oxalobacter formigenes OXCC13]
          Length = 393

 Score =  259 bits (661), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 65/422 (15%), Positives = 132/422 (31%), Gaps = 88/422 (20%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P +   +   ++I  +  I W+   PI+    + G+I+   NV  I++   GI+    
Sbjct: 48  NPPKASFLIIRYTLILFVIAIIWACFSPIDEITRAEGKIIPSSNVQVIQNLEGGIVSDIP 107

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
                 +  G  +                                     +K D++ K  
Sbjct: 108 ------VKIGQVV-------------------------------------HKDDIVMKLD 124

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E+R                  F          + +   ++        +  ++ S L+  
Sbjct: 125 ETR------------------FASSAEESKAGIDVLKEQVNQRAQEIAEKRSRLSQLQQS 166

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            +   K+L M K L  +  VS+ ++ + +R V     E+  N      +           
Sbjct: 167 YAFINKELQMSKPLLAQGVVSEVEILRLQRQVSDLRGEMDANRLAIPRL----------- 215

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                         L + +       +     +   ++ T+ SP+ G I      +    
Sbjct: 216 -----------ESQLAEAKAKLEGASASSLAAKDRLDRTTVRSPVDGIIKTININTVGGV 264

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q    +M+IVP      + A+V P  +  +K G  A V+   Y        +A +E I 
Sbjct: 265 IQPGMNVMEIVPVEDKLLVEARVRPSDVGFLKVGQPAMVKISAYDFSIYGGLEAEVENIT 324

Query: 372 PIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                   N + + +Y V ++     L   +  + +  G  A       + +L   ++ P
Sbjct: 325 ADSI---TNEKGESFYLVRVRTKKNYLGTEEKPLPIIPGMMASASIKTGSKSLMTYLLKP 381

Query: 430 IT 431
           I 
Sbjct: 382 IF 383


>gi|194335532|ref|YP_002017326.1| secretion protein HlyD family protein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308009|gb|ACF42709.1| secretion protein HlyD family protein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 393

 Score =  259 bits (661), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 70/436 (16%), Positives = 130/436 (29%), Gaps = 78/436 (17%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R+    +K    + +IG    + W+   P++  V   G +        +++   G ++K 
Sbjct: 27  RDTRGPVKLGIWILLIGFGSFLLWAAFAPLDEGVPCQGLVSIATKRKVVENLRGGRVEKV 86

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVL 127
            V  G  + +G  L+  +        D        +R     +  E      +    D+L
Sbjct: 87  NVREGQMVKEGDVLIMLDSQTARARYDEVHQHYLGMRATADRLIAEMRGAPSITFHKDLL 146

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +      +Q                              +   R ++L+R         
Sbjct: 147 TEPDRQLAQQ-----------------------------NMQNQRQLFLSR--------- 168

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            R  L    K L  M +L  +     N                                 
Sbjct: 169 -RVSLQILNKQLEAMTSLAREGYAPLNQ-------------------------------- 195

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E  L+ A +    +  L Q Q     +  K   L +      + SP +G +V  Q  +
Sbjct: 196 QHELELKIAEFKSSTASQLAQVQLEVEADGEKTRALAEELADTEVRSPASGQVVGLQVQT 255

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  Q +M IVP  +   I  KV P  I  +  G    V F  +A   +   + ++
Sbjct: 256 VGAVIQPGQKIMDIVPLHESLLIDTKVAPHLIDSIHNGLPVDVSFSSFAHSPQLVVEGVV 315

Query: 368 EKIDPIISQQ---DNNLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLA 423
           E +   I      +       YY   + +T     S    E++ G P +V+      +L 
Sbjct: 316 ESLSKDIVTDPQVNPMTPGASYYLARVSVTPEGMTSLGRREMQPGMPVQVVIKTGERSLL 375

Query: 424 QEIIHPITDNWPKIFE 439
             ++ P+        +
Sbjct: 376 TYLVDPLIKRIAVSMK 391


>gi|167648123|ref|YP_001685786.1| HlyD family type I secretion membrane fusion protein [Caulobacter
           sp. K31]
 gi|167350553|gb|ABZ73288.1| type I secretion membrane fusion protein, HlyD family [Caulobacter
           sp. K31]
          Length = 469

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 65/428 (15%), Positives = 148/428 (34%), Gaps = 10/428 (2%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                +    P  L R+ L +++  I + + WSIL  +++  ++ G+++   NV  I++ 
Sbjct: 40  PAALEVLETPPNPLGRIILWAMLAFIAIALAWSILGKVDMVAAAPGKVIPRGNVKLIQAA 99

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G+++   V  G  +  G PL+  +   T   +   + ++ +         + +D+   
Sbjct: 100 DYGVVRALHVVEGQSVRAGQPLVDLDPTATGADVAQARQALLSADIDAARATALVDYAGG 159

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +         +    +        +T     +        +L+      R        +E
Sbjct: 160 RSTAFRAPDGADRASV--------ATQRAFVDAKRREQAATLQGLQQDRRQRQGELGMIE 211

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           ++   L   +   ++ L  M++L  K    +  +++ E+ +     +L     E+     
Sbjct: 212 SEMVKLAQQIPLAEERLAGMRSLASKGYAPRMKVSELEQTIVGMRQDLAIRRDERSKAQA 271

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +  +  +       + +E+   L + Q        +LT          + +P  G I  
Sbjct: 272 AVAGVDQQIAKARGEFSREVLDALTEAQANRRLRGEELTKASDKAGLTVLTAPQDGVIQQ 331

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            Q  +     + + PLM +VP      I A+V  +    V +G +  ++   Y   R   
Sbjct: 332 MQVHTLGGVVKPADPLMVLVPKGGELIIEARVQNRDAGFVHEGQSVEIKLEAYPFTRYGV 391

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
              +IE I     Q +          V L    ++     + L  G  A V        +
Sbjct: 392 VHGVIEHIGRDAVQDEKEGLVFP-AMVKLTQPWISVEGRRVPLAPGLAATVEIKTGERRI 450

Query: 423 AQEIIHPI 430
              ++ P+
Sbjct: 451 IGFLLSPL 458


>gi|84684411|ref|ZP_01012312.1| probable HlyD family secretion protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667390|gb|EAQ13859.1| probable HlyD family secretion protein [Rhodobacterales bacterium
           HTCC2654]
          Length = 389

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 68/427 (15%), Positives = 151/427 (35%), Gaps = 60/427 (14%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
             +  +S   +   + W+ +  ++  V + G++++      I++   GI+ +  V  G +
Sbjct: 16  SMVIWVSAAAVAVFVFWTAIAWVDEIVRAPGDVISSARPQIIQNLEGGILAELLVSEGDR 75

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +  G  +      E    +      I  L   R  ++ E +  D  +   D         
Sbjct: 76  VEPGDVIARLHGTEFRSTVTDYLEQIAALEIKRLRLEAELAGHDTFDVPAD--------- 126

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                                   ++  S    L   ++ +++R D        + +L  
Sbjct: 127 ------------------LAARTPNMVASEAALLAARQADFISRRD------GAKQVLDE 162

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
              +L +++N+ ++  V+  ++ +  +                   L   NE+  +  L+
Sbjct: 163 AATELQLLENMLDQKIVALIEVTKARKAHAD--------------ALTRYNEIVTQTELK 208

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A    E+ RD        A     L I +   ++  + SP+ G +      +     + 
Sbjct: 209 RAEEYAEVLRDQ-------ATLRQNLKIAQDQLDRTVLTSPMRGIVNNLAVTTIGGVVRP 261

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + L +I+P      + A+V P+ I +V+ G  ATV+   Y        K  ++ I    
Sbjct: 262 GEELAEIIPLGDQILVEARVKPEDIANVQPGQQATVKLSAYDYTIYGSLKGTVDLISADT 321

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            + D       +Y VIL +     +D    +E+R G  A+V     + T+   ++ P+  
Sbjct: 322 FKDDRVRDGDPHYRVILSLDLSGLTDRQRSLEIRPGMVADVELHTGSKTILHYLVKPLYK 381

Query: 433 NWPKIFE 439
           +  + F 
Sbjct: 382 S-REAFR 387


>gi|119946468|ref|YP_944148.1| type I secretion membrane fusion protein, HlyD family protein
           [Psychromonas ingrahamii 37]
 gi|119865072|gb|ABM04549.1| type I secretion membrane fusion protein, HlyD family protein
           [Psychromonas ingrahamii 37]
          Length = 404

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 66/435 (15%), Positives = 155/435 (35%), Gaps = 55/435 (12%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L+  +  +   +  + ++G+IG   WS    I+    ++GE++    V  I++   G+
Sbjct: 19  ARLEGYYRRNYSVVLWVLLLGMIGFGFWSASFRIDQVARATGEVIASSRVQIIQAVDGGV 78

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+ G ++ +G  L T +       +    V +  L+      ++ +         
Sbjct: 79  LSTLNVKEGDRVAKGEVLATLDQTRIGAAVKEVDVRLSALKAKATRLRAEVT-------- 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                +   +F  G+      +K++          +  L  +  
Sbjct: 131 --------------------GSKRLIFPEGVQRFPDLMKVERALFEQ---KQTGLSEELR 167

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L+  +S   ++  ++K L     V++ ++ +  R +  +  +L                
Sbjct: 168 TLKVAVSLAGEEAELIKELSGSGDVNRTEVIRSARALNDAQAQL---------------- 211

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                      YL+E+S +L + +   A  +  LT  ++       ++ + G +   +  
Sbjct: 212 -----INRKNKYLEEVSSELAKAEDEIAQNVQILTQRQQQLADSVFIASLPGIVKNVRVT 266

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     +    LM+I+P      I AKV+P  I  V+KG  AT+RF  +           
Sbjct: 267 TLGGVLRGGDELMQIIPVDDELIIEAKVSPADIGQVQKGLQATIRFDPFDYTIYGGVIGE 326

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLA 423
           +  +     +++     + YY V +       +  +   +E+  G  A+V     + T+ 
Sbjct: 327 VIYVSGDTLKEETGQGEEIYYRVHVTTQTSPVTTTSGRVLEILPGMTAQVDIKTSDRTVL 386

Query: 424 QEIIHPITDNWPKIF 438
             ++ P+     + F
Sbjct: 387 NYLLKPLRKTLSESF 401


>gi|160897521|ref|YP_001563103.1| HlyD family type I secretion membrane fusion protein [Delftia
           acidovorans SPH-1]
 gi|160363105|gb|ABX34718.1| type I secretion membrane fusion protein, HlyD family [Delftia
           acidovorans SPH-1]
          Length = 458

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 68/425 (16%), Positives = 155/425 (36%), Gaps = 10/425 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            +L R   L +I +  L+   +  P+E  V +SG+++  D V  ++    GI+    V  
Sbjct: 42  TALARGKWLLVIPVAALVVTGLFYPVENVVVASGQVIPSDRVQTVQHLEGGIVTAVHVRE 101

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + QG PLL  +       +    ++++ L   + T ++    L  +          R
Sbjct: 102 GQAVTQGQPLLEID-------LGSNSLNLEQLTARMATAQAVKARLGAESQGRPLQ---R 151

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                D   +        F+        SL     +++    +   ++ +   L   L  
Sbjct: 152 TAFPADLDAQVVQAELGAFSARALEHQGSLAAAQAQLQQARGDVAQVQARIEGLETNLRL 211

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           HQ++ ++   L  +  + Q ++  ++R + +   EL  +     +    I +   +    
Sbjct: 212 HQQEASIAGQLASEQLIGQLEVLDKQRALEQVRAELAASRQTLFSNRAKIEQAQAKLQET 271

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              + +  S +L Q +R  A     L      R +  +L+P +G +   +S  +    + 
Sbjct: 272 QGAFRRRASDELAQTERELASLNEDLVRARTQRTRTAVLAPTSGFVKGLRSSGAGWVVKP 331

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            +P+++IVP      + A+++P    +V  G    V+   Y  +R       +  +    
Sbjct: 332 GEPILEIVPDKDEVIVEARLSPADRGYVHPGQATRVKISAYDFLRYGSVPGQVTLVAADA 391

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            +  N   +  Y+ +   +        +  +  G  AE+     +      ++ P+    
Sbjct: 392 DRDPNLADSPSYFRIQASLEQPWVGRTDNRITTGMQAELDLLLGHEPFIWYLLRPVLRIQ 451

Query: 435 PKIFE 439
            + F 
Sbjct: 452 SEAFR 456


>gi|206563977|ref|YP_002234740.1| transporter system transport protein [Burkholderia cenocepacia
           J2315]
 gi|198040017|emb|CAR55998.1| transporter system transport protein [Burkholderia cenocepacia
           J2315]
          Length = 390

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 69/446 (15%), Positives = 135/446 (30%), Gaps = 62/446 (13%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M  F W   +    A  +RM  L +  +   + WS+   ++       ++        I+
Sbjct: 1   MSDFPWSAHRAREAAPARRMLWLIVAALAIFLVWSVFANLDEVAVGEAKVTPASKGQVIQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSAL 117
           S   GI+ +  V  G  +  G  L T + +     ++     I  L+     +  E + L
Sbjct: 61  SLEGGILLELAVREGDVVDAGQRLATLDPVLARSSMEETLERITALQGRAARLYAEMNDL 120

Query: 118 DFLNNKYDVL-EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
             +    ++  EKA   RE QL                                      
Sbjct: 121 PGIEFPAELANEKAVTGRERQLF-----------------------------------VA 145

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           NR       + LR  L   + +L +   L +  A ++ ++ +  +   + + +L     E
Sbjct: 146 NRRAFRENVANLREQLRLAEDELRIALPLLKTGATNEVEVLRLRQKAAEFSTKLAAAQSE 205

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                                Y   +  D  +        +           +  I +P 
Sbjct: 206 ---------------------YYVALKADYSKTMADLEPLLKVREGRADQLRRTVIRAPA 244

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   +  +          LM+IVP      I A+++P+ I  +  G  ATV+   + 
Sbjct: 245 RGIVKDIRVSTVGGVIPPGGMLMEIVPLDDQLLIEARLSPRDIAFIHPGQEATVKITAFE 304

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVL 414
                   A +E+I P   +   + +   Y   +L               +  G  A   
Sbjct: 305 SSIYGSLPAKVERISPDTIEDQVDRRVYYYRVYVLTQHAYLETRDGKRHPILPGMVATAE 364

Query: 415 FTAKNTTLAQEIIHPITDNWPKIFER 440
                 T+   ++ P+      + ER
Sbjct: 365 IRTGRRTVFDYLVKPLNRAAEALRER 390


>gi|83313156|ref|YP_423420.1| membrane-fusion protein [Magnetospirillum magneticum AMB-1]
 gi|82947997|dbj|BAE52861.1| Membrane-fusion protein [Magnetospirillum magneticum AMB-1]
          Length = 461

 Score =  257 bits (657), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 63/427 (14%), Positives = 148/427 (34%), Gaps = 13/427 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            R  P S   + + S +    L+  S +L I+  V++   I     V  ++    G I +
Sbjct: 18  PRLTPPSASWLLVWSALAFAVLVGGSAVLEIDEVVTAQARIEPSSQVRHVQHFEGGTISE 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V  G+ + +G  L+   + +    +  K+             ++ LD +         
Sbjct: 78  VLVHEGTLVAEGDVLVRLINSQGAGDLADKRARWAAFHARAARLRADLDNVA-------- 129

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             E R  + ++   +       +    +S   +   +    +       ++ E K + L 
Sbjct: 130 --EIRWPRDVEIDAETRKRELAIHAERLSHRAQQATVISREIERRRREVVETETKVTGLS 187

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
              +   +++ + +  ++   V   ++ + ER       E+         +   ++E   
Sbjct: 188 RAQAKGVEEMRIKRKAYDSGVVGNQEIVKLEREQLMLDTEVSTARDSISRLKAQMSEAEA 247

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
             +     +   +  +  + +   +   + + +      +  I SP+ G +  +   S  
Sbjct: 248 RLSEFEKGWRAGVLDETGKVEAELSALRATMEVATDRESRSEIRSPVRGIVKMSAIASVG 307

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
             A+    LM IVP      + AKV P+ I H++ G  A+VR   Y   R       +  
Sbjct: 308 QVARPGDTLMDIVPVDDALVVEAKVPPQDIGHLRPGLAASVRLSAYDQFRFGALPGHVVM 367

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
           +     ++     T  YY+V ++       D       +R+G          + ++ + +
Sbjct: 368 VGADSFEETRGATTATYYKVQIRSDKTELLDGKGVAWPVRSGMAGTASIVIGSKSILRMV 427

Query: 427 IHPITDN 433
           + P+  N
Sbjct: 428 LDPLLRN 434


>gi|299533514|ref|ZP_07046892.1| type I secretion membrane fusion protein, HlyD family [Comamonas
           testosteroni S44]
 gi|298718497|gb|EFI59476.1| type I secretion membrane fusion protein, HlyD family [Comamonas
           testosteroni S44]
          Length = 409

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 135/418 (32%), Gaps = 62/418 (14%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           R+  L    ++  + W+    I+   +  G+++       I+S   GI+ +  V  G  +
Sbjct: 38  RVVWLVTAFVLAFLAWAWFFEIDEVSNGGGKVIPSSREQRIQSLEGGILAELLVREGDIV 97

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESRE 135
            +G  L   E       ++      +        +  E    D L               
Sbjct: 98  EKGQVLAKLEPTRGESSVEETAARYRAALAASVRLRAEVEGRDNLQFP------------ 145

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q LD   +  ++ S +F                        R  L +  + L   L+  
Sbjct: 146 -QELDGHAQLKASESALFRSR---------------------RAALSDTVAGLNQALALV 183

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +K+L + ++L    A S  +L + +R   +  L++ E                       
Sbjct: 184 RKELGITQSLQASGAASSVELIRLQRQGAELELKIAEA---------------------R 222

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           + Y+     +L +         S +     + ++ T+ SP+ G +   Q  +       +
Sbjct: 223 SGYMVRSREELAKADAEAKSLSSVVRGRADSLDRLTLQSPVRGVVKSLQVTTIGGVVPPN 282

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM +VP      + A ++P+ I  ++ G  A V+   Y        K  +  I P   
Sbjct: 283 GLLMALVPLDDQLLVEAHISPRDIAFIRPGQEALVKVTAYDYAVYGGLKGQVVTIAPDTQ 342

Query: 376 QQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           + +   +   YY V+++         +   + +  G  A         T+   +  P+
Sbjct: 343 RDEVKPEI-VYYPVLVRTDSDVLVNKAGQRMPIVPGMVAATDIRTGRKTVWDYLTKPL 399


>gi|238752185|ref|ZP_04613666.1| Hemolysin transport protein [Yersinia rohdei ATCC 43380]
 gi|238709556|gb|EEQ01793.1| Hemolysin transport protein [Yersinia rohdei ATCC 43380]
          Length = 461

 Score =  257 bits (656), Expect = 3e-66,   Method: Composition-based stats.
 Identities = 67/429 (15%), Positives = 149/429 (34%), Gaps = 11/429 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R      + ++ ++ WSI+  ++I  S++G+++  ++   I+    G++ 
Sbjct: 40  VERPVAPLARRTAWFLALTLVMVLVWSIVGRLDIHASANGKVIVSEHSKVIQPLEPGMVT 99

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +G ++     L+    I     ID  K    + R       + L       D   
Sbjct: 100 AIHVRDGDRVTANQLLIELNPIGIDAEIDNIKQQAMHRRLEAARMTALLT------DTPL 153

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           + F        + +    S   K FN   + + R           +    +++ N+    
Sbjct: 154 ENFRVPAGSPDEMVNSAKSLLIKEFNGHNAELARQESELAVNQAQLQSALVNIANQ---- 209

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           + L+ +  + L  ++ L +  +++Q +L  QER    +T E     +E   +      L 
Sbjct: 210 KILMKNIHQRLRALQTLAKSKSIAQVELLVQEREWLNATAEASRFQNESAILQAKARHLT 269

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A   +     L +NQ        +L  L++ + Q+ + +P++G I      + 
Sbjct: 270 QTRWHYVAEKKRAYQEQLNKNQEVINQLRQELIKLKEKQRQQRLRAPVSGVIQQLAIHTL 329

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP +    +   +  K +  V+ G    V+   +   R       ++
Sbjct: 330 GGVVTTAQPLMVLVPENAPLALDVMIQNKDVGFVRPGQGVEVKVDSFPYTRFGTLSGTVK 389

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I     +            + L    L      + L  G    V        +   ++ 
Sbjct: 390 HISQDAMEDQQQGLVFP-ARIQLNSDTLLVEGKPVRLSAGMAVSVEIKTGRRRVIDYLLS 448

Query: 429 PITDNWPKI 437
           P+     + 
Sbjct: 449 PLQQYQSEA 457


>gi|46201630|ref|ZP_00208183.1| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 456

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 63/424 (14%), Positives = 149/424 (35%), Gaps = 13/424 (3%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
            P S   + + S +    L+  S +L I+  V++   I     V  ++    G I +  V
Sbjct: 16  TPPSASWLLVWSALAFAVLVGGSAVLEIDEVVTAPARIEPSSQVRHVQHFEGGTISEVLV 75

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G+ + +G  L+   + +    +  K+             ++ LD +           +
Sbjct: 76  HEGTLVAEGDVLVRLINSQGAGDLADKRARWSAFHARAARLRADLDNIT----------D 125

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            +  + +D   +     + +    +S   +   + +  +       ++ E K + L    
Sbjct: 126 IKWPRDIDIDAETRKRETAIHAERLSHRAQQATVIMREIERRRREVVETETKVTGLSRAQ 185

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +   +++ + K  ++   V   ++ + ER       E+         +   ++E     +
Sbjct: 186 AKGGEEMRIKKKAYDSGVVGNQEIVKLEREQLMLDTEVSTARDSISRLKAQMSEAEARLS 245

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                +   +  +  + +   A   + + +      +  I SP+ G +  +   S    A
Sbjct: 246 EFEKGWRAGVLDETGKVEAELAALKATMEVATDRESRSEIRSPVRGIVKMSAIASVGQVA 305

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +    LM IVP      + AKV P+ I H++ G  A+VR   Y   R       +  +  
Sbjct: 306 KPGDTLMDIVPVDDTLVVEAKVPPQDIGHLRPGLAASVRLSAYDQFRFGALPGRVVMVGA 365

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHP 429
              ++   + T  YY+V++        D       +R+G            ++ + ++ P
Sbjct: 366 DSFEETKGVTTATYYKVLIHADKAELLDGKGVAWPVRSGMAGTASIVIGAKSILRMVLDP 425

Query: 430 ITDN 433
           +  N
Sbjct: 426 LLRN 429


>gi|322515049|ref|ZP_08068057.1| type I secretion membrane fusion protein [Actinobacillus ureae ATCC
           25976]
 gi|322118929|gb|EFX91106.1| type I secretion membrane fusion protein [Actinobacillus ureae ATCC
           25976]
          Length = 406

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 70/441 (15%), Positives = 162/441 (36%), Gaps = 71/441 (16%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +   ++      +  + +L    ++  + W+   P+E        ++        +S 
Sbjct: 16  NDLNAAMQTEKHRGIFAVIILFFAFLVVFVIWAYHSPLEEVTRGQ-SVIPTSREQIAQSL 74

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDF 119
             GII++ +V+ G  + +   LLT +D  ++ ++   K  + NL+     +  E   +  
Sbjct: 75  DPGIIREMKVKEGDIVEKDQILLTLDDTRSSAMLRETKAKVLNLQAVSTRLQAEAYGMPL 134

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                                   K+ +   +       + Y+       R+R++     
Sbjct: 135 ------------------------KFSTDIPRDIQAREKAAYQ------ARLRAMSDAVK 164

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L +  +LL        +++ +   + ++  +S+ +L + +      + +L + I E+KN
Sbjct: 165 GLTHSKALLD-------REIALTSPMVKRGVMSEVELLRTKHQ----SADLAQQIAERKN 213

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                             Y  E + +L + +   A     L +     E+  I +P+ G 
Sbjct: 214 -----------------RYAAEANEELVRTESELAQAKETLAMYADPVERSQIKAPLRGI 256

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +   +  +     Q  Q +++I+P  +   ++A ++PK +  ++ G  A V+   Y    
Sbjct: 257 VKNIKINTVGGVVQAGQDILEIIPLDEKLLVQAYISPKDVAFIRSGQLALVKISAYDYAS 316

Query: 360 EKKFKAIIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFP 410
               +  +  I P   Q D    T      + YY ++++  +    D N   +E+     
Sbjct: 317 YGGLEGKVTLISPDTLQDDRTQSTLKLNPDESYYRILVETNESKIFDKNGNPLEITPSMT 376

Query: 411 AEVLFTAKNTTLAQEIIHPIT 431
           A V       T+ Q +I PIT
Sbjct: 377 ATVDIRTGEKTIFQYLIKPIT 397


>gi|225076745|ref|ZP_03719944.1| hypothetical protein NEIFLAOT_01796 [Neisseria flavescens
           NRL30031/H210]
 gi|224951913|gb|EEG33122.1| hypothetical protein NEIFLAOT_01796 [Neisseria flavescens
           NRL30031/H210]
          Length = 397

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 66/422 (15%), Positives = 141/422 (33%), Gaps = 71/422 (16%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           I  + W+   P+E     +G I+       I+S  SGI+ +  V+ G  + +   L+  +
Sbjct: 2   IVFVIWAYNSPVEEVTRGNGNIIPSSREQVIQSLDSGIVTEIMVKEGDMVEKDQILMKLD 61

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D  ++ ++   +  ++NL   +   K+                                 
Sbjct: 62  DTRSSAVLRESEAKVENLEATVARLKAEA-----------------------------YG 92

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
               F+  + S  R  K+   + R     R  + +  S L    ++  +++ +   +  +
Sbjct: 93  TKLSFSDSVGSELRRRKIAAYKAR-----RQAMTDAVSGLSQSKAALDREIAITAPMVAE 147

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             VS+ +L +  R     + +L   I E+ N                  Y  + + +L Q
Sbjct: 148 GVVSEVELLRMRRD----SADLATQISERHN-----------------RYKADANNELLQ 186

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +   A     + +     E+  I +P+ G +   +  +        + +M+IVP     
Sbjct: 187 AESELAQSKENVAMRADPVERSQIRAPMRGIVKGIKVTTIGGVVNAGEDIMQIVPVDDKL 246

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT----- 383
            + A + P+ I  ++ G  A V+   Y        +  +  +           +      
Sbjct: 247 LVEAYIRPQDIAFIRTGQPALVKVSAYDYSIYGGLEGKVTLVGADTVSNSMQNRANDLKL 306

Query: 384 ---QEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              Q YY V+++  + +  D N   + +  G  A V               PI D     
Sbjct: 307 DPNQVYYRVLVQTENNSLKDKNGKPMPIIPGMVATVDIKTGEKNHL-----PIPDQTDYA 361

Query: 438 FE 439
           +E
Sbjct: 362 YE 363


>gi|110678458|ref|YP_681465.1| HlyD family secretion protein [Roseobacter denitrificans OCh 114]
 gi|109454574|gb|ABG30779.1| HlyD family secretion protein, putative [Roseobacter denitrificans
           OCh 114]
          Length = 435

 Score =  256 bits (653), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 52/406 (12%), Positives = 135/406 (33%), Gaps = 22/406 (5%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            ++W+    IE+   + G ++       ++S   GI++   +  G  + QG  L+  +DI
Sbjct: 37  AVSWASWARIEVMARAQGVVVPSGRARNVESLEGGIVRDILISEGDAVTQGQVLIRIDDI 96

Query: 91  ETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                +         +      ++ E    D  +     L +       ++         
Sbjct: 97  GAASTLGEITARRDAMLAKALRLEAELLGEDAPDFSSLGLAEDHPLALREMA-------- 148

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +F+   ++      + ++++        +L +  + +   L    +++ +      
Sbjct: 149 ----LFDSRQAADLSQRTVLVSQVEQRSQEIEELGSALARIDESLELLDEEIALRT---A 201

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
              V +  +   ER   +   E    +   +  +  + E          N   EI+ +  
Sbjct: 202 SGVVPRAQIIPIERERTRKRQERDSVLSRSRQAVTALGEAEARVRELNLNRRAEINTERS 261

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
                 +     L        + ++ +P+ G +      +  +     + + +IVP    
Sbjct: 262 DTLNELSVLDETLKRASDILNRTSLRAPVEGIVSVLNVNTLGSVIAPGEEVARIVPADDN 321

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + A+V P+ I  ++    A V+   +        +  + +I     + +     + Y+
Sbjct: 322 LEVEARVRPEDIAFIRLDLPAKVKLTSFDFTIYGALEGRVVRIGADAERDETT--GETYF 379

Query: 388 EVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            +I++    A S N    E+R G  A V       T+   ++ P+ 
Sbjct: 380 PIIVRTDSNALSRNGETHEIRTGMIASVDILTGERTVLDYLLKPLR 425


>gi|332186552|ref|ZP_08388296.1| type I secretion membrane fusion , HlyD family protein
           [Sphingomonas sp. S17]
 gi|332013535|gb|EGI55596.1| type I secretion membrane fusion , HlyD family protein
           [Sphingomonas sp. S17]
          Length = 448

 Score =  256 bits (653), Expect = 8e-66,   Method: Composition-based stats.
 Identities = 63/440 (14%), Positives = 153/440 (34%), Gaps = 17/440 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +L  +   +++   +++ +  +  + W+ L  ++ + +  G++    N   ++    GI+
Sbjct: 14  HLDDSPRRAIRVGAIVAFLFFVVGLGWAALARLDAAAAGEGQVTVSGNRRTVQHRDGGIV 73

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKY 124
           K   V +G  +  G  L   E  E          S   ++  R  ++ E +    +    
Sbjct: 74  KAMLVRDGEHVRAGQILFRLEGAEVAASERALAASVIDLQAQRARLEAEIAG-HAIVWPA 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D      + R       + +  +          +++  S ++   +   +         +
Sbjct: 133 DFATATGDDRR-----LVERAKALQLAQLRSRNAALAASDQVLRQQAAEVGKQTTGYNAQ 187

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +       +S  + L   + L ++  VS+N +   ER + +      +           I
Sbjct: 188 ADATARQRASLMQQLESTRKLADEGYVSRNTVRAIERSIQQLEGADADYSSRSAAAREQI 247

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +   +        ++E +  L   Q    + + K         +  I +P++G +V  +
Sbjct: 248 GQTRAQMVQTRRRQVEEAATALRDTQFQLNEMLPKWAAARDQLARTEIRAPVSGRVVGLR 307

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
            F+     Q  QP++ IVP +    +RA   P  I  V  G  A V+F    D       
Sbjct: 308 VFTVGGVIQAGQPILDIVPDAAPLIVRANFAPGDIDGVIAGRPAEVKFLSLHDRGLPILA 367

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD------NNIELRNGFPAEVLFTAK 418
             +  +     + +     + Y+   + +     +        +  +R G P  V    +
Sbjct: 368 GTVRSVSADSLRDE--ASGRSYFTAEIAVPREQIARIAEVRGGDTGIRAGVPVAVTVPLR 425

Query: 419 NTTLAQEIIHPITDNWPKIF 438
             +  Q ++ P+T+ + + F
Sbjct: 426 PRSALQYLLDPLTETFARSF 445


>gi|163732769|ref|ZP_02140214.1| HlyD family secretion protein, putative [Roseobacter litoralis Och
           149]
 gi|161394129|gb|EDQ18453.1| HlyD family secretion protein, putative [Roseobacter litoralis Och
           149]
          Length = 435

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 52/403 (12%), Positives = 132/403 (32%), Gaps = 22/403 (5%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    IE+   + G ++       ++S   GI++   +  G  + QG  L+  +DI   
Sbjct: 40  WASWARIEVMARAQGVVVPSGRARNVESLEGGIVRDILISEGDAVTQGQVLIRIDDIGAA 99

Query: 94  DLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             +         +      ++ E    D  +     L         ++            
Sbjct: 100 STLGEITARRDAMLTKALRLEAELLGEDAPDFSNLGLADDHPLALREMA----------- 148

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +F+   ++      + ++++        +L +  + +   L    +++ +         
Sbjct: 149 -LFDSRQAADLSQRTVLVSQVEQRSQEIEELGSALARIDESLELLDEEIALRT---ASGV 204

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V +  +   ER   +   E    +   +  +  + E          N   EI+ +     
Sbjct: 205 VPRAQIIPIERERTRKRQERDSVLSRSRQAVTALGEAEARVKELNLNRRAEINTERSDTL 264

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +     L        + ++ +P+ G +      +  +     + + +IVP      +
Sbjct: 265 NELSVLDETLKRASDILNRTSLRAPVEGIVSVLNVNTLGSVIAPGEEVARIVPADDNLEV 324

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A+V P+ I  ++    A V+   +        +  + +I     + +     + Y+ +I
Sbjct: 325 EARVRPEDIAFIRLDLPAKVKLTSFDFTIYGALEGRVVRIGADAERDETT--GETYFPII 382

Query: 391 LKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           ++    A S N    E+R G  A V       T+   ++ P+ 
Sbjct: 383 VRTDSNALSRNGETHEIRTGMIASVDILTGERTVLDYLLKPLR 425


>gi|239817423|ref|YP_002946333.1| type I secretion membrane fusion protein, HlyD family [Variovorax
           paradoxus S110]
 gi|239804000|gb|ACS21067.1| type I secretion membrane fusion protein, HlyD family [Variovorax
           paradoxus S110]
          Length = 438

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 73/438 (16%), Positives = 147/438 (33%), Gaps = 15/438 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H    +   +           ++++  +GL       P+E  V + G ++  D V  I+ 
Sbjct: 14  HKRAAQTSPKGRRRKWVIGGAVALLAAVGLG-----FPMETVVVAPGRVIPSDRVKSIQH 68

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              GI+    V+ G ++ QG PL+  +       +    ++ + L       ++    L 
Sbjct: 69  LEGGIVSSVLVKEGDKVTQGQPLVEID-------LGGSGLNFEELTARYAATQATRIRLM 121

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +        ES    + + +    +   +        V       L   RS  L +   
Sbjct: 122 AESRGQPLRRESFAADIDESVLDGETGAYEARALEQRGVMAGAVSGLEGARSRLLEQ--- 178

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K   L   L+  QK+L + + L  +  V Q ++ ++ R V     EL        +  
Sbjct: 179 QAKVKGLNDRLALMQKELEISEQLLNEKLVGQVEVLEKRRQVESVRSELAVARQGAISAS 238

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I E   +       + +  S +L   +R FA     L      R +  + +P  G + 
Sbjct: 239 AAITEAQAKMAEAEGRFRRRASDELATVERQFASLNEDLARARTQRSRTMVKAPADGIVK 298

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +S S     +  + +M++VP      I A++ P     V+ G  A V+   Y  +R  
Sbjct: 299 GLRSASPGWVIKPGEAIMEVVPDKDEIMIEARLNPNDRGFVEVGQAARVKITAYDYLRYG 358

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             +  +  +     +         YY +++             +  G  +EV        
Sbjct: 359 AVEGKVTLVAADADRDPAIANAAPYYRILVSTEQAHVGREENRITAGMESEVDLKVGTDP 418

Query: 422 LAQEIIHPITDNWPKIFE 439
               I+ P+     + F 
Sbjct: 419 FIWYILRPVLKLRREAFR 436


>gi|259417584|ref|ZP_05741503.1| type I secretion membrane fusion protein, HlyD [Silicibacter sp.
           TrichCH4B]
 gi|259346490|gb|EEW58304.1| type I secretion membrane fusion protein, HlyD [Silicibacter sp.
           TrichCH4B]
          Length = 390

 Score =  254 bits (650), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 59/409 (14%), Positives = 145/409 (35%), Gaps = 54/409 (13%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           TW+    ++  V + G++++      +++   GI+ +  V  G  +  G  L   +D + 
Sbjct: 32  TWAGFASVDEIVRADGQVVSSSRSQIVQNLEGGILAELYVRQGDTVQAGQILAKLQDTKF 91

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               D  +  I  L       ++ ++                        G Y       
Sbjct: 92  RAASDDLQDQIDGLEIKQYRLEAEIE------------------------GAYEFAVPDA 127

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                  +  S +  L   +S Y +R +          +L   + +L+ +K+L E+  V+
Sbjct: 128 LASRSPDILASERALLKARQSDYDSRRNSA------EDILRQLKNELSNLKSLHEQKIVA 181

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             ++N+ ++ V                     +E+  +A L  A        +  +  R 
Sbjct: 182 LLEVNEAKKKVSD--------------AQAKFDEIGTQAELTLAE-------EYSETLRL 220

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                 +  +      +  I SP+AG +      +     +    +++I+P  +  ++ A
Sbjct: 221 LTSLRQEQRLARDQLNRTVITSPMAGIVNSLAVTTIGGVVRPGDEILEIIPLGEELFVEA 280

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +V P+ I +V++G   T++   Y        +  ++ +     + + + +   +Y V ++
Sbjct: 281 RVKPENIANVQRGQDVTIKLSAYDYTIYGSLRGKVDVVSADTFEDERDPRAAPFYRVTVR 340

Query: 393 ITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +   +       IE+R G  A       + T+   ++ P+  +  + F 
Sbjct: 341 VDRSSLTARQQQIEIRPGMRATAELQTGSKTILTYLLKPLYKS-REAFR 388


>gi|319795668|ref|YP_004157308.1| type I secretion membrane fusion protein, hlyd family [Variovorax
           paradoxus EPS]
 gi|315598131|gb|ADU39197.1| type I secretion membrane fusion protein, HlyD family [Variovorax
           paradoxus EPS]
          Length = 389

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 64/407 (15%), Positives = 133/407 (32%), Gaps = 61/407 (14%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           + ++ WS    ++   + +G+++       I+SP  GI+ + +V  G  +  G  L  F+
Sbjct: 29  VAMLGWSWFFELDEVSTGAGKVVASSKEQTIQSPEGGILFELKVHEGDIVNAGQVLAQFD 88

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFESREEQLLDFLGKYH 146
             ++  +++      +          + +    L    +VL  A     E          
Sbjct: 89  RTKSESMVNESASRARAAMAMSARLTAEVRGTPLVFPAEVLVDADLVHTE---------- 138

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                      S +YRS              R  L++  + +   L+  +++L + + L 
Sbjct: 139 -----------SDLYRSR-------------RESLQSALAGIAQALTLLRRELALTEPLV 174

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            + A S  ++ + +R                      INEL   A      Y+ +   +L
Sbjct: 175 ARGAASDVEVLRLKR---------------------QINELESRAADTRNQYIVKAREEL 213

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            +         S       +  + T  SP+ G +      +           M IVP   
Sbjct: 214 AKANADVEAHGSITRGRSDSLTRLTFTSPVRGIVKDIAVTTVGGVLPPGGKFMGIVPLDD 273

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              I A+++P+ +  +  G  A V+F  Y           +  I P   Q +       Y
Sbjct: 274 KLLIEARISPRDVAFIHSGQDAIVKFTAYDYSIFGGLTGKVTTISPDTIQDEVKRDV-YY 332

Query: 387 YEVILKITDLAFSD---NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           Y V ++       D    +  +  G  A       + ++   ++ P+
Sbjct: 333 YRVYIRTDVDHLLDRSGKSRPIVPGMIATADIQTGSKSVLDYLLKPL 379


>gi|262376225|ref|ZP_06069455.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter lwoffii SH145]
 gi|262308826|gb|EEY89959.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter lwoffii SH145]
          Length = 395

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 71/415 (17%), Positives = 141/415 (33%), Gaps = 61/415 (14%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           L++W+ +  +E   + +G+I+       I+S   GI+ K  V+ G  + +G  L   +  
Sbjct: 37  LLSWAWIFKLEEVSTGTGKIIPSSKEQVIQSLDGGILTKLNVKEGEIVERGQVLAQLDPT 96

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDF--LNNKYDVLEKAFESREEQLLDFLGKYHST 148
                +   +  + + R      ++ +    L    +VL+     +EE  L         
Sbjct: 97  RFESNVGESESLLVSSRATSARLRAEVTGAPLVFPEEVLKYPKLVKEETAL--------- 147

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
                                        R +L+   + L   L   Q++L M   L  K
Sbjct: 148 -------------------------YQSRRANLQESVAGLEQALLLVQQELEMTAPLVAK 182

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            A S+ ++ + +R       +LR  +++ +N                  Y      +L +
Sbjct: 183 GAASEVEVLRLKREAN----DLRNQMNDIRN-----------------QYYVNAREELSK 221

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
                  +   +     T  +    SP+ G +      +      Q+  LM IVP  +  
Sbjct: 222 ANTDVETQQQVVRGKSDTLSRTVFKSPVRGVVKEIDVMTLGGVIPQNGKLMTIVPLDEKL 281

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            + A+++P+ I  ++    A V+   Y      +    +  I P   + +   Q Q YY 
Sbjct: 282 LVEARISPRDIAFIRPDQEALVKITAYDYSIYGELNGKVAMISPDTLRDEV-KQDQFYYR 340

Query: 389 VILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
           V ++      S+N      +  G  A V     + T+   +I P       + ER
Sbjct: 341 VYIRTDSDKLSNNAGQEFNITPGMVATVDIRTGSKTVMDYLIKPFNKAKEALRER 395


>gi|154706061|ref|YP_001425441.1| type I secretion adaptor protein (HlyD family) [Coxiella burnetii
           Dugway 5J108-111]
 gi|154355347|gb|ABS76809.1| type I secretion adaptor protein (HlyD family) [Coxiella burnetii
           Dugway 5J108-111]
          Length = 442

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 59/419 (14%), Positives = 151/419 (36%), Gaps = 6/419 (1%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + ++    +   I W+  + I+    + GEI   + +  ++    G++ +  V+ GSQ+ 
Sbjct: 27  LAIIICGILAAFIIWAYFVRIQELSLAVGEITPVNRISVVEHLEGGLVYQILVDEGSQVK 86

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G PL   ++      +   +     L  +++ EKS ++  +    +   A  + E  + 
Sbjct: 87  KGQPLAKIDETLAKAELQQLEAKRLTLMSNVEREKSLIEKTDFSPTLPATAVHNNEPDIS 146

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             + +      ++      ++     + + ++       L L  +    +     H++++
Sbjct: 147 --VNEILERQQQLHQIQSQALNAQQAVIVQQILQREEELLKLRQQLETAKKNAVLHREEV 204

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           TM + L E   +S+ DL + ER +  +   + E   E     + + E            +
Sbjct: 205 TMFRKLIEPGYISRLDLIRAERSLNTAEGTVTELTKEISIAKQALQEAESRLAELIQTEM 264

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++++  L+++Q         +  L+       + +PIAGT++  +  +           M
Sbjct: 265 QKMADRLQRSQHELFQVQFAIQKLKYHLANTVVRAPIAGTVINMKI-TEGKVLAAGGFAM 323

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IVP +       ++ P  I  ++ G    V+   Y   +       +  +   +   + 
Sbjct: 324 NIVPLNAPLRAEIRIRPADIGFIRIGDPVLVKVTAYHFTQFGGIPGKLIHLSATVLLDE- 382

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             + Q YY   + +          ++  G            +L   +  P+     + F
Sbjct: 383 --KQQPYYLGRVSLERDYVGLKENKIIPGMTVNADIITGEKSLLAYLFKPVRIFASRAF 439


>gi|254461443|ref|ZP_05074859.1| type I secretion membrane fusion protein, HlyD [Rhodobacterales
           bacterium HTCC2083]
 gi|206678032|gb|EDZ42519.1| type I secretion membrane fusion protein, HlyD [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 406

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 63/406 (15%), Positives = 144/406 (35%), Gaps = 12/406 (2%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
               + I  +  WS+   I  +V +SG I  E+N   ++ P  G++ +    +G ++  G
Sbjct: 6   FALCVLICVIGVWSVQARIAGAVIASGMIEVENNRQILQHPQGGVVGELLARDGDRVEVG 65

Query: 82  TPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             +L F+D      + +    +      +  +  E    D +     +L  A E+ E  L
Sbjct: 66  DVVLRFDDQLLQSELAIVTNQLNVLCARKARLVAEADETDTIAFDTLLLAAAAENPEINL 125

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           L          +++F     S+ +  +    ++            + +  +   +    +
Sbjct: 126 L------IDGQTRLFRARNKSLEQEEEQIENQVVQTKDQITGFSRQLAATQNQSALLIDE 179

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  ++ LF+K     + ++  +R   +   E+ +       +   I  L  E     +  
Sbjct: 180 LADLQTLFDKGLAQASRVSALKRERARLLGEVGQFEARIAQLEGDIARLEIEKLRLRSVR 239

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            ++    L        +   +      T  +  + +P++G I  ++ F+  +    + P+
Sbjct: 240 REQAIASLRDLSVQEIELAERELSTRDTLSKMAMRTPVSGVIYGSRVFAVQSVISPADPV 299

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M ++P  +   + A++    I  V  G  A +RF  +      +    + KI   +   +
Sbjct: 300 MYVIPQDQPLIVAARIAAIHIDQVHVGQDAALRFSAFDQRPTPEIFGTVSKISADVYADE 359

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIE-LRNGFPAEVLFTAKNTTLA 423
             +  Q YY   L       +  +I+ L  G P E        +  
Sbjct: 360 --VSGQTYYLANLVPKSGELAKLDIQVLLPGMPVETFIRTVERSPL 403


>gi|221068118|ref|ZP_03544223.1| type I secretion membrane fusion protein, HlyD family [Comamonas
           testosteroni KF-1]
 gi|220713141|gb|EED68509.1| type I secretion membrane fusion protein, HlyD family [Comamonas
           testosteroni KF-1]
          Length = 425

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 61/415 (14%), Positives = 133/415 (32%), Gaps = 56/415 (13%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           R+       ++  + W+    I+   +  G+++       I+S   GI+ +  V  G  +
Sbjct: 54  RVVWWVTAFVLAFLAWAWFFEIDEVSNGGGKVIPSSREQRIQSLEGGILAELLVREGDIV 113

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  L   E       ++      +         ++           +E     +  Q 
Sbjct: 114 EKGQVLAKLEPTRGESSVEETAARYRAALAASVRLRAE----------VEGQGSLQFPQE 163

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           L    +  ++ S +F                        R  L +  + L   L+  +K+
Sbjct: 164 LQAHEQLKASESALFRSR---------------------RAALNDTVAGLSQALALVRKE 202

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L + ++L    A S  +L + +R   +  L++ E                       + Y
Sbjct: 203 LGITQSLQASGAASSVELIRLQRQGAELELKIAEA---------------------RSGY 241

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           +     +L +         S +     + E+ T+ SP+ G +   Q  +       +  L
Sbjct: 242 MVRSREELAKADAEAKSLSSVVRGRADSLERLTLQSPVRGVVKSLQVTTIGGVVPPNGLL 301

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M +VP      + A ++P+ I  ++ G  A V+   Y        K  +  I P   + +
Sbjct: 302 MALVPLDDQLLVEAHISPRDIAFIRPGQEALVKVTAYDYAVYGGLKGQVVTIAPDTQRDE 361

Query: 379 NNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              +   YY V+++         +   + +  G  A         T    +  P+
Sbjct: 362 VKPEI-VYYPVLVRTDSDVLVNKAGQRMPIVPGMVAATDIRTGRKTFWDYLTKPL 415


>gi|238653887|emb|CAV30831.1| Type I secretion membrane fusion protein, HlyD
           [magnetite-containing magnetic vibrio]
          Length = 456

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 52/420 (12%), Positives = 153/420 (36%), Gaps = 14/420 (3%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +R+  L+ + ++    W+ L  ++I+  + G+++    +  I+    GI+++  V+ G  
Sbjct: 43  RRLVRLTALTMLLFTVWAALFELDIAAHAPGKVVPAGQMKRIQHLEGGIVREIHVKEGEV 102

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G PL+  E   +   +   +  I  L+ +    ++ LD                  +
Sbjct: 103 VKVGQPLVELESTASEADLQEIETRIGTLKVNAIRLQAQLDGAKG---------LVFPAE 153

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+       ++   +F      +  ++  +  +++       ++  + S          +
Sbjct: 154 LIATYPNQIASARAMFRAQRDRLISAVSEQELKIKQREAELAEIGTRLSHSVGRHKILSE 213

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            + + + L  +  +++ +  +  +        + E+      +   + +           
Sbjct: 214 QVAINQKLLSQGLMNEYEHLELRKEEQSLRGGIAESRAALGRLKAALEQENVALQSLRLG 273

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
             +++ ++L +  R  A+   ++     +R + TI +PI G ++     +          
Sbjct: 274 EDEQLRKELGETSRELAEFSERVRKFADSRARTTIRAPIDGAVMTLYVVTEGGVVAPGGT 333

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++ +VP      +  ++   ++  V+ G  A ++    A          + +I P    +
Sbjct: 334 VLSMVPGGDRLVVEVRLPVGEVGFVRPGQRARLQLVSTAGRGFSPLDGKVTQISPDSIAE 393

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
            +    Q +Y V +     AF+D+     LR G   E      + ++ + ++ P   +  
Sbjct: 394 QD---QQPFYLVRIAPAADAFADDVARYSLRPGVEVEASIVTGSRSVLRYVLDPFLGSLK 450


>gi|29655320|ref|NP_821012.1| HlyD family type I secretion membrane fusion protein [Coxiella
           burnetii RSA 493]
 gi|161831332|ref|YP_001595939.1| HlyD family type I secretion membrane fusion protein [Coxiella
           burnetii RSA 331]
 gi|29542592|gb|AAO91526.1| type I secretion adaptor protein (HlyD family) [Coxiella burnetii
           RSA 493]
 gi|161763199|gb|ABX78841.1| type I secretion membrane fusion protein, HlyD family [Coxiella
           burnetii RSA 331]
          Length = 442

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 60/419 (14%), Positives = 150/419 (35%), Gaps = 6/419 (1%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + ++    +   I W+  + I+    + GEI   + +  ++    G++ +  V+ GSQ+ 
Sbjct: 27  LAIIICGILAAFIIWAYFVRIQELSLAVGEITPVNRISVVEHLEGGLVYQILVDEGSQVK 86

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G PL   ++      +   +     L  +++ EKS ++  +    +   A  + E  + 
Sbjct: 87  KGQPLAKIDETLAKAELQQLEAKHLTLMSNVEREKSLIEKTDFSPTLPATAVHNNEPDIS 146

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             + +      ++      ++     + + ++       L L  +    +     H++++
Sbjct: 147 --VNEILERQQQLHQLQSQALNAQQAVIVQQILQREEELLKLRQQLETAKKNAVLHREEV 204

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           TM + L E   +S+ DL + ER +  +   + E   E     +   E            +
Sbjct: 205 TMFRKLIEPGYISRLDLIRAERSLNTAEGTVTELTKEISIAKQAFQEAESRLTELIQTEM 264

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++++  L+++Q         +  L+       + +PIAGT+V  +  +           M
Sbjct: 265 QKMADRLQRSQHELFQVQFAIQKLKYHLANTVVRAPIAGTVVNMKI-TEGKVLAAGGFAM 323

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IVP +       ++ P  I  ++ G    V+   Y   +       +  +   +   + 
Sbjct: 324 NIVPLNAPLRAEIRIRPADIGFIRIGDPVLVKVTAYHFTQFGGIPGKLIHLSATVLLDE- 382

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             + Q YY   + +          ++  G            +L   +  P+     + F
Sbjct: 383 --KQQPYYLGRVSLERDYVGLKENKIIPGMTVNADIITGEKSLLAYLFKPVRIFASRAF 439


>gi|302038745|ref|YP_003799067.1| putative type I secretion membrane fusion protein HlyD [Candidatus
           Nitrospira defluvii]
 gi|300606809|emb|CBK43142.1| putative Type I secretion membrane fusion protein HlyD [Candidatus
           Nitrospira defluvii]
          Length = 463

 Score =  254 bits (648), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 63/426 (14%), Positives = 143/426 (33%), Gaps = 14/426 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++   P+ + R  L +I+ +    +TWS L  I+I   + G+ +   +   I+   +G+
Sbjct: 40  EIQHAPPSPIGRAILWTIMLVFTTAVTWSSLSHIDIVAVAPGKTIPSGHSKTIQPFETGV 99

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V++G  + QG  L+  +  +     D      +         ++ +   +     
Sbjct: 100 IASIHVQDGQTVRQGEVLIELDATQNGADRDRALNEYRAALVEAARLRALIAGYST---- 155

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
               FE  EE    F+               + V  S  +   R  ++   + +L     
Sbjct: 156 ----FEVPEEADPQFILLQQQLLRDQVAEFSARVDASRHLIGQRRAALDATKDNLRR--- 208

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L A +    +     ++L  +  VS+ D  Q E+       E      + +     + E
Sbjct: 209 -LEATVPIEAERAKAYRSLLAQQYVSKMDYLQFEQQRIDKAQEWAGQKSKLRQDQAALAE 267

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                +   + + +    +L   +   A  + ++    +    + ++SPI G +      
Sbjct: 268 AEQNYHALLSEFQQSKQAELSTTETKTASLLQEVRKAGQKIHLQKLVSPIDGVVQQLAVH 327

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +QPL+ +VP      + A+   K I  VK+G    ++   +           
Sbjct: 328 TVGGVVTPAQPLLIVVPQDHPVEVEAQFENKDIGFVKEGQPVEIKVETFPFTLYGTIPGK 387

Query: 367 IEKIDPIISQQDNNLQTQEYY-EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           +  +       D +     Y   + +    +     +I L  G    V        + + 
Sbjct: 388 VLSVSGDAVPLDKDKGGLIYAGRISMDRATMQVEGRHIHLSPGMAVIVEVKTGQRRVIEY 447

Query: 426 IIHPIT 431
           ++ P+ 
Sbjct: 448 LLSPLL 453


>gi|255264262|ref|ZP_05343604.1| type I secretion membrane fusion protein, HlyD [Thalassiobium sp.
           R2A62]
 gi|255106597|gb|EET49271.1| type I secretion membrane fusion protein, HlyD [Thalassiobium sp.
           R2A62]
          Length = 389

 Score =  253 bits (647), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 66/427 (15%), Positives = 149/427 (34%), Gaps = 59/427 (13%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +          L    +   I W+    I+  V + GEI++      I++   GI+ +  
Sbjct: 10  DEMRGSSMTIWLVRATVFIFIAWAAFAWIDEIVRADGEIVSSSRPEIIQNLEDGILAEMM 69

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLE 128
           V  G  +L G  L   E        +  +  I +L   R  ++ E               
Sbjct: 70  VSEGDIVLPGDVLARLESTRFQTAANDIQDQIYSLDIRRLRLEAE--------------- 114

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                         G++        +    ++  S +  L   +S      D ++K    
Sbjct: 115 ------------LEGQFDFIVPNELSTRQPAIVASERALLNARQS------DYDSKVRGA 156

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           + +L+  + +L +M+++  +  V+  ++    +    + ++               NE+ 
Sbjct: 157 KGILTEARCELDLMEDMLNREVVALIEVTCARKAHSDAEIKF--------------NEII 202

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +  LE A    +  ++L       A       I +    +  I SP+ G +      + 
Sbjct: 203 TKTELERAGSYSDTPKEL-------ATLRQDARIAQDQLSRTLITSPMRGIVNNLGVTTI 255

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +  + + +I+P  +  ++ A+V P+ I +V +G  AT++   Y        K  + 
Sbjct: 256 GGVVRPGEEIFQIIPMDEELFVEAQVKPEDIANVVRGQDATIKLSAYDYTIYGSLKGAVH 315

Query: 369 KIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            I     + +       +Y+V   + ++ L      I++R+G  A V       T+ + +
Sbjct: 316 LISGDTFKDERKPDGDPHYKVTLRVDLSQLTDRQQMIDIRSGMLASVELHTGERTVLRYL 375

Query: 427 IHPITDN 433
             P+  +
Sbjct: 376 TRPLYKS 382


>gi|152994821|ref|YP_001339656.1| HlyD family type I secretion membrane fusion protein [Marinomonas
           sp. MWYL1]
 gi|150835745|gb|ABR69721.1| type I secretion membrane fusion protein, HlyD family [Marinomonas
           sp. MWYL1]
          Length = 403

 Score =  253 bits (645), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 61/432 (14%), Positives = 147/432 (34%), Gaps = 60/432 (13%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           H      +    +  ++  + W+    I+    + GE++    V  I+S   G+I +  V
Sbjct: 23  HKKKRSLIVWPILTALVAFVVWAEYFYIDEVAQAQGEVIASSRVQLIQSVDGGVISELNV 82

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEK 129
             G ++  G  L   +    +  +   +  +  L+     +  E      L    D+L +
Sbjct: 83  REGDRVQAGQILGQLDQTRLSASVGEIESRVFALKAKAIRLRAEILGDKKLTFPQDMLSR 142

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                                      I+ V ++L  +          +  ++ +   L+
Sbjct: 143 ------------------------YQDIAQVEKALFEQ---------RKTGIKEELRTLQ 169

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             +S  Q++  ++K+L     VS +++ +    +  +  +L                   
Sbjct: 170 VSVSLAQEEQDIVKHLQASGDVSSSEMLKAREALNAAEAKL------------------- 210

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                   +L+E S +L + +         L   ++  +    ++ + G +      +  
Sbjct: 211 --INRKNQFLEEASAELAKVEDDLGQSEQILARKQQELQDSVFIAKVPGIVKNVSVTTVG 268

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              +  + +M+I+P      + AK+ P+ I  VK G  A +R   +        +A +  
Sbjct: 269 GVLRAGEEIMQIIPIDDELLVEAKIRPQDIARVKPGLLANIRLDPFDYTIYGGVEAKVVY 328

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +     +++++   + YY V +       +      IE+  G  A+V       TL   +
Sbjct: 329 VSADTLKEESSKGEEIYYRVHVIPLQQPITTTIGRQIEMLPGMTAQVSIKTDKRTLMDYL 388

Query: 427 IHPITDNWPKIF 438
           + P+     + F
Sbjct: 389 LKPLRKTLSQAF 400


>gi|284006182|emb|CBA71422.1| RTX toxin ABC transporter protein [Arsenophonus nasoniae]
          Length = 449

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 73/433 (16%), Positives = 176/433 (40%), Gaps = 20/433 (4%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L  + P+   R+T L++ +G++  + W+    +++  +S+G ++   +   I++     
Sbjct: 26  ALMNSPPSPFARLTALTLSMGVVITMGWAYWGQLDVQATSTGRLIVSGHSQVIQAYEQSR 85

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V+NG  + +G PLLT + +  +  I      I+         +S L+   NK   
Sbjct: 86  LTELHVKNGQHVKKGEPLLTLDALGVSQDIIGISHQIEYHTIEKLLYQSLLE---NKIPH 142

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +  F    ++  + + K +      F+  I+S+   +++  T  ++         N  +
Sbjct: 143 QQLTFHQLTKRQQEKISKNYHHEKAQFDAQIASLASEIEVNHTSQKAKT-------NDLN 195

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           +L  L  + ++ L   K L +K  +S+++  +QE+ +    LE+R  I +Q + L  ++ 
Sbjct: 196 VLFLLQKNIKQRLEARKTLSQKQMISKSEYLEQEKEL----LEIRRLIAQQTSELNILDS 251

Query: 247 LYDEANLEFANYLKEISRDLEQNQRT----FADEMSKLTILEKTREQKTILSPIAGTIVY 302
                      +  +   +    ++      +    +    ++  + + + SP+ GT+  
Sbjct: 252 QEKNLKERLNAFQSQKQHEWNDKKKQSEIQLSMLEQEYAKFDEREQLEIVRSPVTGTVQQ 311

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
             +++     Q +Q LM IVP + +     K+  K I  ++ G   TV+   +   R   
Sbjct: 312 LATYTLGAVLQPAQNLMVIVPDNDVQLAEVKILNKDIGFIRPGQNVTVKVDAFPYTRYGT 371

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
            +  +  I    +Q +         ++ LK  +L    ++I++  G             +
Sbjct: 372 IEGEVLSISRDSAQDEQLGLIFP-AQISLKQNNLMVDGHSIDITPGMSIVAEIKTDKRRV 430

Query: 423 AQEIIHPITDNWP 435
              ++ PI +   
Sbjct: 431 IDYLLSPIREYLS 443


>gi|300312349|ref|YP_003776441.1| hemolysin-type secretion transmembrane protein [Herbaspirillum
           seropedicae SmR1]
 gi|300075134|gb|ADJ64533.1| hemolysin-type secretion transmembrane protein [Herbaspirillum
           seropedicae SmR1]
          Length = 386

 Score =  252 bits (644), Expect = 7e-65,   Method: Composition-based stats.
 Identities = 72/437 (16%), Positives = 156/437 (35%), Gaps = 63/437 (14%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M  N ++N   S + +  LS+  ++ L+ W+ +  I+    + G+++       +++P  
Sbjct: 1   MEMNNEKNPLISAQWVLRLSMASVLVLLLWAAVSQIDQVTRAQGQVIAVSRTQSVQAPDG 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLNN 122
           G +K+  V+ G  + QG  L+  E       ++  +  +  LR  +   ++ +    LN 
Sbjct: 61  GPVKQILVKEGEAVKQGQLLMVLEQDRVQTSLNDSRAKVAALRISLARLRAEVYGHPLNF 120

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDL 181
           + D+L+                                    K  +   + +Y+ R + +
Sbjct: 121 EPDLLD-----------------------------------YKEYIANQKDLYVKRKILI 145

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +   + L+ +L    ++L M K+L     V + D+ + +R V     ++           
Sbjct: 146 DQDLASLQDMLGLANQELEMNKSLERTGDVGRADVLRLQRNVADIRAQI----------- 194

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                     N +   Y +E   D+ + Q     +  +L    +  E   + +P  G + 
Sbjct: 195 ----------NNKRNKYFQEALVDMTKVQEDLNTQREQLEDRTQVLEHTELKAPADGVVK 244

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +  +     +    +M+I+P      + AKV+     +VK G  A V+   Y      
Sbjct: 245 NIKVTTIGGVVRSGDVVMEILPVDN-LIVEAKVSTADSAYVKVGQAANVKLDAYDYSIYG 303

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAK 418
                +  + P     +       YY V + + +  F       I+++ G  A V   A 
Sbjct: 304 TLNGHVVYVSPDTLLDETRQGAMPYYRVHIALEEAVFKGRKADAIQVKPGMTATVEIKAN 363

Query: 419 NTTLAQEIIHPITDNWP 435
             T+   +  PI     
Sbjct: 364 TRTVLSFLTKPIAKTLQ 380


>gi|56696866|ref|YP_167228.1| HlyD family type I secretion membrane fusion protein [Ruegeria
           pomeroyi DSS-3]
 gi|56678603|gb|AAV95269.1| type I secretion membrane fusion protein, HlyD family [Ruegeria
           pomeroyi DSS-3]
          Length = 437

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 66/438 (15%), Positives = 157/438 (35%), Gaps = 6/438 (1%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     K                 I  +  L  WS    I  +V  SG I     +  ++
Sbjct: 1   MADPKSKRRTWTTGRPFAVTVFSLIFLLGCLAVWSTRANISGAVIGSGTIEVSTTMTAVQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
            P  G++ +  V NG ++  G  L+  +  +    +++ +  +  +  +I   ++ +D  
Sbjct: 61  HPIGGVVSEINVRNGDRVRAGDILVQLDSRQFHSDLNVVEGELFEVLANIARLQAIMD-- 118

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
            N+  +      +   Q    +        +       ++   + +   ++  +      
Sbjct: 119 -NRRQMELTPVLAEAVQTKPEVKLLVERQQQQLTAHFEAITSGMHLLDEQITQVRAEIAG 177

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +E + +     +     ++   + L E+  ++ ++L + ++       E+ +N  +   +
Sbjct: 178 VEAQLAAKLDEIDLLSLEIENAEQLAERKLITMSELYKLKKDDVTIRGEIGQNEAKIAEL 237

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              I+EL  +  +   +  ++   +L + +      M     L     +  I +P+ G I
Sbjct: 238 RGKISELNLKRLVVIPDAQEKAEEELRKLRPLRVRFMEMRLSLLDDLSKLEIRAPVNGKI 297

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
             +Q     +    ++PLM IVP      I  ++    I  V  G  A+++F  +     
Sbjct: 298 HESQVQGRRSVITAAKPLMMIVPDDDPYQIGVRIAAADIDQVFIGQEASIKFRAFNARDL 357

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD-LAFSDNNIELRNGFPAEVLFTAKN 419
                 + +I P ++   + L  + +YEV + +        N  EL  G P E     ++
Sbjct: 358 PIILGSVSRISPDVT--LDPLTKKYHYEVKVALNAGEEAKLNGRELLPGMPVEAYIATES 415

Query: 420 TTLAQEIIHPITDNWPKI 437
            T    ++ PI   + + 
Sbjct: 416 RTAINYVVRPIKRFFDRA 433


>gi|255745825|ref|ZP_05419773.1| RTX toxin transporter [Vibrio cholera CIRS 101]
 gi|262147162|ref|ZP_06027970.1| membrane-fusion protein [Vibrio cholerae INDRE 91/1]
 gi|262169259|ref|ZP_06036951.1| RTX toxin transporter [Vibrio cholerae RC27]
 gi|262191142|ref|ZP_06049345.1| membrane-fusion protein [Vibrio cholerae CT 5369-93]
 gi|255736900|gb|EET92297.1| RTX toxin transporter [Vibrio cholera CIRS 101]
 gi|262022072|gb|EEY40781.1| RTX toxin transporter [Vibrio cholerae RC27]
 gi|262031397|gb|EEY50003.1| membrane-fusion protein [Vibrio cholerae INDRE 91/1]
 gi|262032977|gb|EEY51512.1| membrane-fusion protein [Vibrio cholerae CT 5369-93]
 gi|327484105|gb|AEA78512.1| RTX toxin transporter [Vibrio cholerae LMA3894-4]
          Length = 453

 Score =  252 bits (643), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 68/441 (15%), Positives = 168/441 (38%), Gaps = 16/441 (3%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 20  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 79

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +     I       +     +   ++ 
Sbjct: 80  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRT- 138

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              LN++    +  F +   +    + + + +    F+  ++S+   +K+  T   +   
Sbjct: 139 --LLNDQLLTHDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAAR-- 194

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                ++    L  L  +  + L   K L +   +   +  +QE+ + ++  ++ +   E
Sbjct: 195 -----QSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAE 249

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +      L +      A   +E      Q +   A    +L+ + +  + + I SP+
Sbjct: 250 LEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPV 309

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+     ++     Q +Q LM IVP +++     ++  K +  V  G + TV+   + 
Sbjct: 310 DGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFP 369

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             R     A +  I    +  +         ++ LK   +      +EL  G        
Sbjct: 370 YTRYGTIDAELLSISRDSTTDEQLGLVFP-AQIQLKTNHIMIDGQTVELTPGMSVVAEIK 428

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                +   ++ PI +   + 
Sbjct: 429 TDKRRVIDYLLSPIQEYQAEA 449


>gi|304392817|ref|ZP_07374752.1| type I secretion membrane fusion protein, HlyD family [Ahrensia sp.
           R2A130]
 gi|303295057|gb|EFL89422.1| type I secretion membrane fusion protein, HlyD family [Ahrensia sp.
           R2A130]
          Length = 486

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 67/479 (13%), Positives = 166/479 (34%), Gaps = 43/479 (8%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
               W    R     + R    S+ + ++  + W++L P+  +V + G  +++     ++
Sbjct: 8   SDIRWHGDARTDSKPIIRFGFWSVCVIMVVFLLWAMLFPLASAVITPGSFVSQGKNKLVQ 67

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSA- 116
               G I +  V +G  +L+G P++  +       +   +     +  L+  +D E+S  
Sbjct: 68  HQSGGRIAQIFVRDGDFVLEGQPVIALDTTSAQADLTKLEARYAMLNALKLRLDAERSGG 127

Query: 117 ------------------------------LDFLNNKYDVLEKAFESREE-QLLDFLGKY 145
                                         L   ++  D++E A  +    ++       
Sbjct: 128 LRSAPLTADGVPAGTSPLTTSALGDGNLGGLRLRSSDGDLVELAATAPAPLEVAPADNAM 187

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             +    +  G + +   L+    +  ++   R+ L+ +     AL +  Q +L  +K L
Sbjct: 188 LQSQRDAYFSGRALLKNRLEALERKAEALTDRRVGLDARVRSQSALQAMTQDELRRLKPL 247

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
                ++++ L+ + R + +    + +   EQ  +   + E+  E N      +   S++
Sbjct: 248 ARDGYIARSRLDGKARALLELEGVITDLESEQAALDTQLEEIAIEMNKLRLENVDSASQE 307

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
             +     A+        +       + +P AG ++     +          + +IVP  
Sbjct: 308 YSKIIGELAELSDSRLAAQSAVAGSLVRAPNAGHVIKLAVTTVGGVVGAGDVIGEIVPKG 367

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               + A+V P  I +VK G  A +    +    +      +         Q +      
Sbjct: 368 SPLIVEARVQPGDIDYVKIGQEADIVVTAFNRRIDDSLTGSVIYKAADS--QRDEKTGDP 425

Query: 386 YYEVILKITDLAFSDNN-----IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           ++ V L I+             ++++ G   E+     + T    ++ P+ D++ + F 
Sbjct: 426 FFSVRLAISPGQIDRAGSEKRMMDIQAGMQGEIYIHTGSRTFMTYLVKPMIDSFRRAFR 484


>gi|23009677|ref|ZP_00050637.1| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 344

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 58/332 (17%), Positives = 119/332 (35%), Gaps = 9/332 (2%)

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            ++ E+     ++    +  +A    E       GK  +  +++F     +         
Sbjct: 19  RLEAERDGAPRISFAAVLRGRAQSDPEA------GKVIAGETRLFELRRDARAGQKAQLK 72

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            R   +      L  + +  R       ++L  +++L+ KN V    +   ER   +   
Sbjct: 73  ERTGQLREEIQGLTGQIAGKRRETELINRELEGVRDLWRKNLVPIQRVTALERDAARLEG 132

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E  + +         I+E   +      +   E++++L + Q   A+ + K    E   +
Sbjct: 133 EHGQLVASVAQAKGKISETELQVIQVDQDLRSEVAKELSEVQAKIAELVEKRVAAEDQLK 192

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  I +P  G +      +        + +M IVP S    I AKV PK I  V+ G  A
Sbjct: 193 RIDIRAPQDGMVHQLAVHTIGGVVSPGESIMLIVPRSDTLVIEAKVAPKDIDQVRLGQHA 252

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN 407
            +R   +      + +  +  +     Q  +      +++V ++   D       I+L  
Sbjct: 253 VLRLTAFNQRTTPEIEGTVSLVAAD--QITDEKTGTSFFKVHVRPDADQVARLKGIKLVP 310

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           G PAEV       T+   +  P+ D   + F+
Sbjct: 311 GMPAEVFIRTGERTVLSYLTKPLNDQVRRAFK 342


>gi|119357544|ref|YP_912188.1| secretion protein HlyD family protein [Chlorobium phaeobacteroides
           DSM 266]
 gi|119354893|gb|ABL65764.1| secretion protein HlyD family protein [Chlorobium phaeobacteroides
           DSM 266]
          Length = 393

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 71/436 (16%), Positives = 141/436 (32%), Gaps = 78/436 (17%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R+  ++++    + ++G  G + W+   P++  V   G +        ++    G ++K 
Sbjct: 27  RDTGSTIRLGIWILLVGFGGFLLWAAFAPLDEGVPCQGVVSIATKRKVVEHLRGGTVEKV 86

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVL 127
           +V  G  + +G  L+  +        D         R     +  E S    +   +D+L
Sbjct: 87  EVREGQIVQEGEVLMRLDSQTARARYDEIHQHYIGTRATADRLLAEMSGAGSIAFHHDLL 146

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                +  E                               +   R ++L+R         
Sbjct: 147 ADPDRTLAE-----------------------------QNMRTQRQLFLSR--------- 168

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +  L    + L+ + +L ++     +                                 
Sbjct: 169 -QVTLRILNEQLSGIVSLVKEGYAPLSQ-------------------------------- 195

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E  L+ A      +  L Q Q     +  K   L +      + SP +G +V  Q  +
Sbjct: 196 QHELELKIAELKSATASQLAQVQLEVEADAEKTRALAEELADTELRSPASGQVVGLQVQT 255

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  Q +M IVP  +   I AKV P  I  ++KG    V F  +A   +   +A++
Sbjct: 256 VGAVIQPGQKVMDIVPLHEGLLIDAKVAPHLIDSIRKGLPVDVSFSSFAHAPQLVVQAVV 315

Query: 368 EKIDPIIS---QQDNNLQTQEYYEVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLA 423
             I   I    Q + ++    YY   + +T     S  N +++ G P +V+      +L 
Sbjct: 316 ASISKDIITDPQTNPSMPGASYYLARIAVTPHGLNSLGNRQMQPGMPVQVVIKTGERSLL 375

Query: 424 QEIIHPITDNWPKIFE 439
             +I P+        +
Sbjct: 376 TYLIDPLLKRITVSMK 391


>gi|149926197|ref|ZP_01914459.1| Membrane-fusion protein; Multidrug resistance efflux pump
           [Limnobacter sp. MED105]
 gi|149825015|gb|EDM84227.1| Membrane-fusion protein; Multidrug resistance efflux pump
           [Limnobacter sp. MED105]
          Length = 452

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 64/420 (15%), Positives = 157/420 (37%), Gaps = 21/420 (5%)

Query: 26  IGIIGLITWSILL-PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           +G+I L  ++ L   ++  V++ G+++    V  I+    GI+++  V+ G  + +G  L
Sbjct: 46  LGLIALSLFASLFIRVDQVVTAPGKVIPSTRVKSIQHLEGGIVQELAVKEGDVVKEGAML 105

Query: 85  LTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           +      +    + +  ++ +++  R  +  E S                     +++  
Sbjct: 106 VQLNLATSGINIEELKSRRAALEMSRARLLGEASG-------------KAPDYPAEIIAN 152

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
               + T    +   ++ +   L +  ++M        +L+ K   L     +  ++L +
Sbjct: 153 YPDLYRTEQATYIARVTELDGILGVNDSQMLGNQGKVGELQAKLEGLENRAVTTLRELEI 212

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L  +  VSQ +   ++R     T E+        +    + +       E   + + 
Sbjct: 213 TRELVRERLVSQLEYLTKKRDYDSLTAEIASMRQTIASAQASVGQSRARRIEEEGKFRRR 272

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            + +L   +R  A    ++      R++  I SPI G +   +  +  N  +Q +P+M++
Sbjct: 273 AADELTTLERQLASLKDEIDRASDQRDRAVIRSPIDGVVKNLKLQAVGNVVRQGEPIMEV 332

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           VP  ++  +  +++P    +V     + V+   Y  +R       + +I           
Sbjct: 333 VPVDEVLVVETRLSPADRGYVSMDQPSEVKVSAYDFLRYGTLPGKVTQIAADTD--PGTE 390

Query: 382 QTQEYYEVILKITDL--AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +T  YY +I+          D  + +  G  AEV     +      ++ P+     + F 
Sbjct: 391 ETGPYYRLIVSTDKAFFGTPDAPLRISPGMTAEVDINVGSQPFIYYLLKPVLKLKQEAFR 450


>gi|254286106|ref|ZP_04961066.1| RTX toxin transporter [Vibrio cholerae AM-19226]
 gi|150423775|gb|EDN15716.1| RTX toxin transporter [Vibrio cholerae AM-19226]
          Length = 467

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 68/441 (15%), Positives = 168/441 (38%), Gaps = 16/441 (3%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +     I       +     +   ++ 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRT- 152

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              LN++    +  F +   +    + + + +    F+  ++S+   +K+  T   +   
Sbjct: 153 --LLNDQLLTHDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAAR-- 208

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                ++    L  L  +  + L   K L +   +   +  +QE+ + ++  ++ +   E
Sbjct: 209 -----QSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAE 263

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +      L +      A   +E      Q +   A    +L+ + +  + + I SP+
Sbjct: 264 LEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPV 323

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+     ++     Q +Q LM IVP +++     ++  K +  V  G + TV+   + 
Sbjct: 324 DGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFP 383

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             R     A +  I    +  +         ++ LK   +      +EL  G        
Sbjct: 384 YTRYGTIDAELLSISRDSTTDEQLGLVFP-AQIQLKTNHIMIDGQTVELTPGMSVVAEIK 442

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                +   ++ PI +   + 
Sbjct: 443 TDKRRVIDYLLSPIQEYQAEA 463


>gi|297579035|ref|ZP_06940963.1| RTX toxin ABC transporter [Vibrio cholerae RC385]
 gi|297536629|gb|EFH75462.1| RTX toxin ABC transporter [Vibrio cholerae RC385]
          Length = 467

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 68/441 (15%), Positives = 168/441 (38%), Gaps = 16/441 (3%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +     I       +     +   ++ 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRT- 152

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              LN++    +  F +   +    + + + +    F+  ++S+   +K+  T   +   
Sbjct: 153 --LLNDQLLTHDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAAR-- 208

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                ++    L  L  +  + L   K L +   +   +  +QE+ + ++  ++ +   E
Sbjct: 209 -----QSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAE 263

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +      L +      A   +E      Q +   A    +L+ + +  + + I SP+
Sbjct: 264 LEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPV 323

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+     ++     Q +Q LM IVP +++     ++  K +  V  G + TV+   + 
Sbjct: 324 DGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFP 383

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             R     A +  I    +  +         ++ LK   +      +EL  G        
Sbjct: 384 YTRYGTIDAELLSISRDSTTDEQLGLVFP-AQIQLKTNHIMIDGQTVELTPGMSVVAEIK 442

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                +   ++ PI +   + 
Sbjct: 443 TDKRRVIDYLLSPIQEYQAEA 463


>gi|15641458|ref|NP_231090.1| RTX toxin transporter [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121588035|ref|ZP_01677786.1| RTX toxin transporter [Vibrio cholerae 2740-80]
 gi|121728451|ref|ZP_01681477.1| RTX toxin transporter [Vibrio cholerae V52]
 gi|147674597|ref|YP_001217003.1| RTX toxin transporter [Vibrio cholerae O395]
 gi|153801720|ref|ZP_01956306.1| RTX toxin transporter [Vibrio cholerae MZO-3]
 gi|153817913|ref|ZP_01970580.1| RTX toxin transporter [Vibrio cholerae NCTC 8457]
 gi|153822678|ref|ZP_01975345.1| RTX toxin transporter [Vibrio cholerae B33]
 gi|153829728|ref|ZP_01982395.1| RTX toxin transporter [Vibrio cholerae 623-39]
 gi|227081619|ref|YP_002810170.1| RTX toxin transporter [Vibrio cholerae M66-2]
 gi|229504978|ref|ZP_04394488.1| membrane-fusion protein [Vibrio cholerae BX 330286]
 gi|229511353|ref|ZP_04400832.1| membrane-fusion protein [Vibrio cholerae B33]
 gi|229518471|ref|ZP_04407915.1| membrane-fusion protein [Vibrio cholerae RC9]
 gi|229607981|ref|YP_002878629.1| membrane-fusion protein [Vibrio cholerae MJ-1236]
 gi|254226274|ref|ZP_04919866.1| RTX toxin transporter [Vibrio cholerae V51]
 gi|254848567|ref|ZP_05237917.1| RTX toxin transporter [Vibrio cholerae MO10]
 gi|298498474|ref|ZP_07008281.1| RTX toxin transporter [Vibrio cholerae MAK 757]
 gi|298499370|ref|ZP_07009176.1| RTX toxin transporter [Vibrio cholerae MAK 757]
 gi|4455068|gb|AAD21060.1| RtxD protein [Vibrio cholerae]
 gi|9655947|gb|AAF94604.1| RTX toxin transporter [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121547730|gb|EAX57822.1| RTX toxin transporter [Vibrio cholerae 2740-80]
 gi|121629275|gb|EAX61710.1| RTX toxin transporter [Vibrio cholerae V52]
 gi|124122744|gb|EAY41487.1| RTX toxin transporter [Vibrio cholerae MZO-3]
 gi|125621188|gb|EAZ49530.1| RTX toxin transporter [Vibrio cholerae V51]
 gi|126511540|gb|EAZ74134.1| RTX toxin transporter [Vibrio cholerae NCTC 8457]
 gi|126519798|gb|EAZ77021.1| RTX toxin transporter [Vibrio cholerae B33]
 gi|146316480|gb|ABQ21019.1| RTX toxin transporter [Vibrio cholerae O395]
 gi|148874807|gb|EDL72942.1| RTX toxin transporter [Vibrio cholerae 623-39]
 gi|227009507|gb|ACP05719.1| RTX toxin transporter [Vibrio cholerae M66-2]
 gi|227013363|gb|ACP09573.1| RTX toxin transporter [Vibrio cholerae O395]
 gi|229345186|gb|EEO10160.1| membrane-fusion protein [Vibrio cholerae RC9]
 gi|229351318|gb|EEO16259.1| membrane-fusion protein [Vibrio cholerae B33]
 gi|229357201|gb|EEO22118.1| membrane-fusion protein [Vibrio cholerae BX 330286]
 gi|229370636|gb|ACQ61059.1| membrane-fusion protein [Vibrio cholerae MJ-1236]
 gi|254844272|gb|EET22686.1| RTX toxin transporter [Vibrio cholerae MO10]
 gi|297541351|gb|EFH77402.1| RTX toxin transporter [Vibrio cholerae MAK 757]
 gi|297542807|gb|EFH78857.1| RTX toxin transporter [Vibrio cholerae MAK 757]
          Length = 467

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 68/441 (15%), Positives = 168/441 (38%), Gaps = 16/441 (3%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +     I       +     +   ++ 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRT- 152

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              LN++    +  F +   +    + + + +    F+  ++S+   +K+  T   +   
Sbjct: 153 --LLNDQLLTHDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAAR-- 208

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                ++    L  L  +  + L   K L +   +   +  +QE+ + ++  ++ +   E
Sbjct: 209 -----QSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAE 263

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +      L +      A   +E      Q +   A    +L+ + +  + + I SP+
Sbjct: 264 LEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPV 323

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+     ++     Q +Q LM IVP +++     ++  K +  V  G + TV+   + 
Sbjct: 324 DGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFP 383

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             R     A +  I    +  +         ++ LK   +      +EL  G        
Sbjct: 384 YTRYGTIDAELLSISRDSTTDEQLGLVFP-AQIQLKTNHIMIDGQTVELTPGMSVVAEIK 442

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                +   ++ PI +   + 
Sbjct: 443 TDKRRVIDYLLSPIQEYQAEA 463


>gi|229529483|ref|ZP_04418873.1| RTX toxin transporter [Vibrio cholerae 12129(1)]
 gi|229333257|gb|EEN98743.1| RTX toxin transporter [Vibrio cholerae 12129(1)]
          Length = 467

 Score =  251 bits (641), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 68/441 (15%), Positives = 167/441 (37%), Gaps = 16/441 (3%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +     I       +     +   ++ 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRT- 152

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              LN++    +  F +   +    + + +      F+  ++S+   +K+  T   +   
Sbjct: 153 --LLNDQLLTHDPMFTALPAEQQALIHENYLNEKNEFDSTLASITAEMKVNRTSQAAR-- 208

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                ++    L  L  +  + L   K L +   +   +  +QE+ + ++  ++ +   E
Sbjct: 209 -----QSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAE 263

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +      L +      A   +E      Q +   A    +L+ + +  + + I SP+
Sbjct: 264 LEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPV 323

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+     ++     Q +Q LM IVP +++     ++  K +  V  G + TV+   + 
Sbjct: 324 DGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFP 383

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             R     A +  I    +  +         ++ LK   +      +EL  G        
Sbjct: 384 YTRYGTIDAELLSISRDSTTDEQLGLVFP-AQIQLKTNHIMIDGQTVELTPGMSVVAEIK 442

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                +   ++ PI +   + 
Sbjct: 443 TDKRRVIDYLLSPIQEYQAEA 463


>gi|326424242|ref|NP_762444.2| RTX toxin transporter [Vibrio vulnificus CMCP6]
 gi|319999627|gb|AAO07434.2| RTX toxin transporter [Vibrio vulnificus CMCP6]
          Length = 467

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 69/441 (15%), Positives = 169/441 (38%), Gaps = 16/441 (3%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T +++ IG++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQKPPSPFARLTAITLSIGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +     I       +     +   ++ 
Sbjct: 94  QVIQSYEQSRVMSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLITQSEFQTNELIRYRT- 152

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              LN++  V +  F +   +    + + + +  + F+  ++S+   +K+  T   +   
Sbjct: 153 --LLNDQPLVQDPMFTALPTEQQALINENYLSEKREFDATLASISAEMKVNRTSQAAR-- 208

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                ++  + L  L  +  + L   K L +   +   +  +QE+ + +   ++ +   E
Sbjct: 209 -----QSDINALIQLTENISQRLAARKTLNQVKVIGHVEYLEQEKELLEVQRQVAQQRAE 263

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +      L +      A   +E      Q +   A    +L+ + +  + + I SP+
Sbjct: 264 LQVLKSQYQSLEERQTGFKAQKHREWLEKRRQAKLQLAALNQELSKVREREQLEIIRSPV 323

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+     ++     Q +Q LM IVP + +     ++  K +  V  G + TV+   + 
Sbjct: 324 DGTVQQLSVYTLGAVLQPAQNLMIIVPENSVQLAEVQILNKDVGFVYPGQSVTVKVDAFP 383

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             R     A +  I    +  +         +V L   ++      +EL  G        
Sbjct: 384 YTRYGTIDAELLSISRDSTTDEQLGLVFP-AQVQLNKNNIVIDGQTVELTPGMSVVAEIK 442

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                +   ++ PI +   + 
Sbjct: 443 TDKRRVIDYLLSPIREYQAEA 463


>gi|229515812|ref|ZP_04405271.1| membrane-fusion protein [Vibrio cholerae TMA 21]
 gi|229347581|gb|EEO12541.1| membrane-fusion protein [Vibrio cholerae TMA 21]
          Length = 467

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 68/441 (15%), Positives = 167/441 (37%), Gaps = 16/441 (3%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +     I       +     +   ++ 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRT- 152

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              LN +    +  F +   +    + + + +    F+  ++S+   +K+  T   +   
Sbjct: 153 --LLNGQLLTHDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAAR-- 208

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                ++    L  L  +  + L   K L +   +   +  +QE+ + ++  ++ +   E
Sbjct: 209 -----QSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAE 263

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +      L +      A   +E      Q +   A    +L+ + +  + + I SP+
Sbjct: 264 LEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPV 323

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+     ++     Q +Q LM IVP +++     ++  K +  V  G + TV+   + 
Sbjct: 324 DGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFP 383

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             R     A +  I    +  +         ++ LK   +      +EL  G        
Sbjct: 384 YTRYGTIDAELLSISRDSTTDEQLGLVFP-AQIQLKTNHIMIDGQTVELTPGMSVVAEIK 442

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                +   ++ PI +   + 
Sbjct: 443 TDKRRVIDYLLSPIQEYQAEA 463


>gi|117925264|ref|YP_865881.1| HlyD family type I secretion membrane fusion protein [Magnetococcus
           sp. MC-1]
 gi|117609020|gb|ABK44475.1| type I secretion membrane fusion protein, HlyD family
           [Magnetococcus sp. MC-1]
          Length = 468

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 70/433 (16%), Positives = 147/433 (33%), Gaps = 22/433 (5%)

Query: 11  RNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
              P+   R+   +I+    L + WSI   I++   + G+IL   +V  I+    G++++
Sbjct: 44  ERPPSPFGRLITWTIMLFCALAVGWSIWGQIDVVAVAQGKILPNGHVKVIQPLEIGVVRE 103

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLI-----DLKKVSIKNLRCHIDTEKSALDFLNNKY 124
             V  G Q+ +G  L+  +   T   +     +L    +   R     E    +     Y
Sbjct: 104 IPVREGEQVAEGEVLVILDPTSTEADLVRFEENLLSAQLDMARWQALAEWDQGEQPQILY 163

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              + A E R +               +    + +   SL+     ++         +  
Sbjct: 164 RSPDGAPEGRVQ-----------KQRWLLKDTLLAHRASLQGIGHELKKQMAELASAKEA 212

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               + LL    K     K L EK   +Q+   + E+   +   +L         +L  +
Sbjct: 213 VRKYQQLLPLIAKRANAQKTLMEKKLAAQSHWLELEQERVELQRDLAIQKSRLAELLAGL 272

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +          A + KE+     ++++   D   +LT   +  + + + SPI G +    
Sbjct: 273 DVTRKRFAETEARFRKEVMEKYVESEQRVIDIEQELTKAARRNQLQVLRSPIDGVVQNLV 332

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +     Q +Q LM+IVP S    + A +  K I  V++G    ++   +   R     
Sbjct: 333 IHTVGGVVQPAQELMRIVPTSGGIEVEAYLANKDIGFVEEGQAVEIKLETFPFTRYGLIN 392

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTL 422
            I++K+     + +        Y   + +           + +  G             +
Sbjct: 393 GIVKKLSADAVEHEEMGLV---YAARISMMKNTMQVGERLVNITPGMSVTAEIKTGKRRI 449

Query: 423 AQEIIHPITDNWP 435
            +  + PI  +  
Sbjct: 450 IEFFLSPIQKSMQ 462


>gi|294084736|ref|YP_003551494.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664309|gb|ADE39410.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 484

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 68/425 (16%), Positives = 161/425 (37%), Gaps = 20/425 (4%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +L  +     + W+I   +   V + G I+   +V  ++S   G + K  V+ G+++ 
Sbjct: 73  LYVLIALFTTIAVVWAIYAEVNEQVRAEGIIVTPSDVQHVQSRLPGSLVKINVQLGAEVE 132

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREE 136
           +G  L   ED +        +++ +        +  E S  D L    +++  + +   +
Sbjct: 133 KGDVLFRLEDEDVLANFQDNEINYQAAYATEIRLKAEISGADSLVFPEELILSSPDVVAQ 192

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +L  F  + ++  S+            L++    + ++    L+ E ++ +       + 
Sbjct: 193 ELQHFQSRKNAMRSR------------LEVLANAVETLERTILEKEAEARIATKQAELYA 240

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L++++ L +     Q  L        ++   +  +          +     E     +
Sbjct: 241 EELSLLEPLVKAGHEPQAILLAARTKYQQAIGTIELSTLSANARRSDLAGKKREIESIVS 300

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           N+  + +  L + Q       ++   LE       I +P++G +      +     Q   
Sbjct: 301 NFKADAAGKLAETQIKTMQYKARQDALEGKVRHADIRAPLSGIVSAVHVKTIGAVVQAGT 360

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L+ IVP      +RA+V P+ +  V+ G  A +    Y   R      +++++    +Q
Sbjct: 361 VLVDIVPSESGYLVRAQVPPQNVAAVQPGQIARISLAAYDPSRYGVLMGVVQRVANNTTQ 420

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            +N      +YE +++I  +  + + I  E+  G P  V       T+   I+ PI  + 
Sbjct: 421 PEN---QMPFYETMIEIPKIELTKSPIRPEITAGMPLTVDILGDKRTVMNYIMTPIQKSL 477

Query: 435 PKIFE 439
              F 
Sbjct: 478 KTAFR 482


>gi|153971521|ref|YP_001393061.1| RTX toxin transporter [Vibrio vulnificus]
 gi|153971717|ref|YP_001393218.1| RTX toxin transporter [Vibrio vulnificus]
 gi|152955043|emb|CAL25395.1| RTX toxin transporter [Vibrio vulnificus]
 gi|152955202|emb|CAL25552.1| RTX toxin transporter [Vibrio vulnificus]
          Length = 453

 Score =  251 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 68/441 (15%), Positives = 174/441 (39%), Gaps = 16/441 (3%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T +++ IG++  + W+    +++  +++G ++     
Sbjct: 20  HHYEFLPAHLALAQKPPSPFARLTAITLSIGVLAALLWAYWGKLDVQATATGRLVVSGRS 79

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V++G ++ +G PLLT + +     I       +     +   ++ 
Sbjct: 80  QVIQSYEQSRVMIIHVKDGQRVEKGAPLLTLDTLGVNQDITRLITQSEFQTNELIRYRT- 138

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              LN++  V +  F +   +    + + + +  + FN  ++S++  +++  T   +   
Sbjct: 139 --LLNDQPLVQDPMFTALPAEQQALITENYLSEQREFNSTLASIHAEMQVNKTSQAAR-- 194

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                ++  + L  L  +  + L   K L +   +   +  +QE+ + ++  ++ +   E
Sbjct: 195 -----QSDINALVQLTENISQRLEARKTLNQVKVIGHVEYLEQEKELLEAQRQVSQQRAE 249

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +      L +  +   A   +E      Q +   A    +L+ + +  + + I SP+
Sbjct: 250 LQVLKSQYRSLEERLSGFKAQKQREWLEKRRQAKLQLAALNQELSKVREREQLEIIRSPV 309

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+     ++     Q +Q LM IVP + +     ++  K +  +  G + TV+   + 
Sbjct: 310 DGTVQQLSVYTLGAVLQPAQNLMIIVPENSVQLAEVQLLNKDVGFIYPGQSVTVKVDAFP 369

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             R     A +  +    +  +         +V LK  ++      +EL  G        
Sbjct: 370 YTRYGTIDAELLSVSRDSTTDEQLGLVFP-AQVQLKKNNIIIDGQTVELTPGMSVVAEIK 428

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                +   ++ PI +   + 
Sbjct: 429 TDKRRVIDYLLSPIREYQAEA 449


>gi|37676695|ref|NP_937091.1| RTX toxin transporter [Vibrio vulnificus YJ016]
 gi|37201238|dbj|BAC97061.1| RTX toxin transporter [Vibrio vulnificus YJ016]
          Length = 467

 Score =  250 bits (639), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 69/441 (15%), Positives = 169/441 (38%), Gaps = 16/441 (3%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T +++ IG++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQKPPSPFARLTAITLSIGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +     I       +     +   ++ 
Sbjct: 94  QVIQSYEQSRVMSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLITQSEFQTNELIRYRT- 152

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              LN++  V +  F +   +    + + + +  + F+  ++S+   +K+  T   +   
Sbjct: 153 --LLNDQPLVQDPMFTALPTEQQALINENYLSEKREFDATLASISAEMKVNRTSQAAR-- 208

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                ++  + L  L  +  + L   K L +   +   +  +QE+ + +   ++ +   E
Sbjct: 209 -----QSDINALIQLTENISQRLAARKTLNQVKVIGHVEYLEQEKELLEVQRQVAQQRAE 263

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +      L +      A   +E      Q +   A    +L+ + +  + + I SP+
Sbjct: 264 LQVLKSQYQSLEERQTGFKAQKHREWLEKRRQAKLQLAALNQELSKVREREQLEIIRSPV 323

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+     ++     Q +Q LM IVP + +     ++  K +  V  G + TV+   + 
Sbjct: 324 DGTVQQLSVYTLGAVLQPAQNLMIIVPENSVQLAEVQILNKDVGFVYPGQSVTVKVDAFP 383

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             R     A +  I    +  +         +V L   ++      +EL  G        
Sbjct: 384 YTRYGTIDAELLSISRDSTTDEQLGLVFP-AQVQLNKNNIVIDGQMVELTPGMSVVAEIK 442

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                +   ++ PI +   + 
Sbjct: 443 TDKRRVIDYLLSPIREYQAEA 463


>gi|167031857|ref|YP_001667088.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida GB-1]
 gi|166858345|gb|ABY96752.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida GB-1]
          Length = 394

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 62/405 (15%), Positives = 130/405 (32%), Gaps = 57/405 (14%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +    + +G+++       I+S   GI+ +  V  G  + +G  L   +  +T   +  
Sbjct: 44  EVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLAQLDPTKTASSVGE 103

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +   +  +      ++ L        +           L+D     + T          
Sbjct: 104 SEAKYRAAKAS----QARLQAEVTGKPLTFPESLRDSPDLIDAETALYQTR--------- 150

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                              R  LE   + ++  L   + +L + +NL +  A S+ ++ +
Sbjct: 151 -------------------RRGLEQTLAGIQDSLQLVRSELQITENLAKMGASSRVEVIR 191

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
             R                       +EL  +AN   ++YL     +L +          
Sbjct: 192 LNR---------------------QRSELELKANEARSDYLVRAREELAKASAEADSLSE 230

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            +     +  + T+ SP+ G +   +  +     Q    +MKIVP  +   I  ++ P+ 
Sbjct: 231 VIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRD 290

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  +  G  A V+   Y           +  I P   Q +   +   YY V ++    + 
Sbjct: 291 IAFIHPGQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEI-YYYRVFIRTEQDSL 349

Query: 399 ---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
              +  +  +  G  A V       T+   +I P+      + ER
Sbjct: 350 QNKAGKHFAIVPGMIATVDIRTGEKTILDYLIKPLNRAKEALRER 394


>gi|240948249|ref|ZP_04752635.1| putative secretion protein [Actinobacillus minor NM305]
 gi|240297288|gb|EER47829.1| putative secretion protein [Actinobacillus minor NM305]
          Length = 477

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 62/407 (15%), Positives = 150/407 (36%), Gaps = 3/407 (0%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
            WS L  IEI   ++G+IL       I+   +  +K+  V NG ++ +G  LL    +  
Sbjct: 72  VWSYLGKIEIVAVATGKILPSGRSKIIQPIETATVKQSYVRNGQRVKKGDLLLELTILGV 131

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +   K ++K     ++  +     L  + + + +   S  + +            ++
Sbjct: 132 ESELFKAKSALK--LASLNQLRQEAMLLAIQENTVPQLKNSNAQVIFGIEDGLFKREQQL 189

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                 +     +     +R     +  +  +   +  +L   ++  + +  L++K   S
Sbjct: 190 ALSQYQAWIAEKQKLEATIRQKETEKKTIHIQIQKIVGMLKYEKERRSDIYGLYKKGHAS 249

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +++   QE  V +   E      +   +   + ++  E  +   ++ + +  +L +    
Sbjct: 250 KHEYFSQENRVIELENERNIQQSKIYELESQLEQVRKEYQVFEQSFHRNVLDELRKANEQ 309

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                 ++   ++ +E   I +P+ GT+   Q+++       +QPLM IVP  +   I A
Sbjct: 310 VEQLTLEVEKNQQRQEYSEIYAPVDGTVQQLQTYTIGGVVTTAQPLMTIVPQDEQFEIEA 369

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            ++ K I  V +G   T++   +   R    K  ++       Q +          +++ 
Sbjct: 370 MLSNKDIGFVNEGQDVTIKIEAFPYTRYGYIKGKVKYFSFEAIQDEKLGLVFPV-TIVMD 428

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            + L+    N+EL  G             +   ++ P+       F+
Sbjct: 429 KSHLSIEGRNVELIAGMAVSAEIKTGERRVIDYLLSPLRKVIDDSFK 475


>gi|117924040|ref|YP_864657.1| HlyD family type I secretion membrane fusion protein [Magnetococcus
           sp. MC-1]
 gi|117607796|gb|ABK43251.1| type I secretion membrane fusion protein, HlyD family
           [Magnetococcus sp. MC-1]
          Length = 455

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 68/426 (15%), Positives = 157/426 (36%), Gaps = 16/426 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           LK  T+     I+    W+    +E    ++GE+   D +   +    GI+ +  +E G 
Sbjct: 41  LKIATVAVAGAILIFFIWANFANMEEVAHTTGEVATTDTIQFAQHLEGGIVGEIFIEEGQ 100

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK-AFESRE 135
           ++ QG PL   +  +     +        L   +  +++ ++        +E+  F+   
Sbjct: 101 RVTQGQPLAQMKSEDVLAEYNQMHAREAILALQVAQKRALINSEPIDLSGIERPLFDHMI 160

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            + +DFL           +   +S+    ++ L +++   +    L N++   R  +  +
Sbjct: 161 AESVDFL-----------DAQRTSLASQREVILIQVKQKEMKLKKLLNQAQANRQQVQYY 209

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            ++L + + L E+  +S+       +   K+  ++ E+  + +     ++E +       
Sbjct: 210 NEELEVRRPLTERKLMSRLQTLSAMQSREKTRADMLESEGDVEVTKLELDEKWQNLRETE 269

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            ++ ++  R+L+          + L  L     +  + SP+ G I   +     +     
Sbjct: 270 DSFYQDAMRELDGAYSELTQIRTTLPRLRDRMTRLVVRSPVDGVIKEIKVNGVGSVLGPG 329

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             + +IVP      +  K+T   I HV  G   TV+   Y   R    +  +  + P   
Sbjct: 330 GEIAEIVPLEDTNKVEVKITTVDIGHVAVGQDVTVKVSTYDYARYGGIQGKLIAVSPSTF 389

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
             +N      YY   +++       +  +  L  G   E      + TL + ++ PI  +
Sbjct: 390 VDENGK--DPYYRGTIQLDQNYVGSDPTKNLLLPGMTVEASIHTGSKTLMEYLLKPIYAS 447

Query: 434 WPKIFE 439
               F 
Sbjct: 448 VNDSFR 453


>gi|320158798|ref|YP_004191176.1| RTX toxin transporter [Vibrio vulnificus MO6-24/O]
 gi|319934110|gb|ADV88973.1| RTX toxin transporter [Vibrio vulnificus MO6-24/O]
          Length = 453

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 69/441 (15%), Positives = 169/441 (38%), Gaps = 16/441 (3%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T +++ IG++  + W+    +++  +++G ++     
Sbjct: 20  HHYEFLPAHLALAQKPPSPFARLTAITLSIGVLAALLWAYWGKLDVQATATGRLVVSGRS 79

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +     I       +     +   ++ 
Sbjct: 80  QVIQSYEQSRVMSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLITQSEFQTNELIRYRT- 138

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              LN++  V +  F +   +    + + + +  + F+  ++S+   +K+  T   +   
Sbjct: 139 --LLNDQPLVQDPMFTALPTEQQALINENYLSEKREFDATLASISAEMKVNRTSQAAR-- 194

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                ++  + L  L  +  + L   K L +   +   +  +QE+ + +   ++ +   E
Sbjct: 195 -----QSDINALIQLTENISQRLAARKTLNQVKVIGHVEYLEQEKELLEVQRQVAQQRAE 249

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +      L +      A   +E      Q +   A    +L+ + +  + + I SP+
Sbjct: 250 LQVLKSQYQSLEERQTGFKAQKHREWLEKRRQAKLQLAALNQELSKVREREQLEIIRSPV 309

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+     ++     Q +Q LM IVP + +     ++  K +  V  G + TV+   + 
Sbjct: 310 DGTVQQLSVYTLGAVLQPAQNLMIIVPENSVQLAEVQILNKDVGFVYPGQSVTVKVDAFP 369

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             R     A +  I    +  +         +V L   ++      +EL  G        
Sbjct: 370 YTRYGTIDAELLSISRDSTTDEQLGLVFP-AQVQLNKNNIVIDGQMVELTPGMSVVAEIK 428

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                +   ++ PI +   + 
Sbjct: 429 TDKRRVIDYLLSPIREYQAEA 449


>gi|255318172|ref|ZP_05359411.1| membrane spanning export protein [Acinetobacter radioresistens
           SK82]
 gi|262379618|ref|ZP_06072774.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter radioresistens SH164]
 gi|255304718|gb|EET83896.1| membrane spanning export protein [Acinetobacter radioresistens
           SK82]
 gi|262299075|gb|EEY86988.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter radioresistens SH164]
          Length = 396

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 69/408 (16%), Positives = 138/408 (33%), Gaps = 61/408 (14%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +E   + +G+++       I+S   GI+ +  V+ G  + QG  L   +       + 
Sbjct: 45  FKLEEVSTGTGKVIASSKEQVIQSLEGGILTRLNVKEGDIVEQGQVLAQLDPTRFASNVG 104

Query: 98  LKKVSIKNLRCHIDTEKSALDF--LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             +  + + +      +S ++   L+    V +     +EE  L                
Sbjct: 105 ESESLLVSAQATAARLRSEVNGTPLSFPESVRKVPALVQEETAL---------------- 148

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                              Y  R +LE   S L+  L   +++L M + L  K A S+ +
Sbjct: 149 ------------------YYSRRSNLEQSMSGLKQALELVRQELVMTEPLVAKGAASEVE 190

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + + +R                       N+L ++ N     Y  +   +L +       
Sbjct: 191 VLRLKREA---------------------NDLQNQMNDLQNQYYVKAREELAKANTDIET 229

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
           +   +     T ++ T  +P+ G +      +      Q+  LM IVP  +   I A+++
Sbjct: 230 QQQVVKGKSDTLQRTTFKAPVRGIVKEIDVMTRGGVVPQNGKLMTIVPLDEQLLIEARIS 289

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           P+ I  ++ G  A V+   Y        K  +  I P   + +   Q Q YY V ++   
Sbjct: 290 PRDIAFIRPGQDALVKITAYDYSIYGGLKGKVTVISPDTIRDEV-KQDQFYYRVYIRTAT 348

Query: 396 LAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
                 +  +  +  G  A V       T+   ++ P       + ER
Sbjct: 349 DKLINKAGQSFGITPGMVATVDIRTGQKTVLDYLLKPFNKAKEALRER 396


>gi|229523469|ref|ZP_04412874.1| RTX toxin transporter [Vibrio cholerae bv. albensis VL426]
 gi|229337050|gb|EEO02067.1| RTX toxin transporter [Vibrio cholerae bv. albensis VL426]
          Length = 467

 Score =  250 bits (638), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 68/441 (15%), Positives = 168/441 (38%), Gaps = 16/441 (3%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +G PLLT + +     I       +     +   ++ 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRT- 152

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              LN++    +  F +   +    + + + +    F+  ++S+   +K+  T   +   
Sbjct: 153 --LLNDQLLTHDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAAR-- 208

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                ++    L  L  +  + L   K L +   +   +  +QE+ + ++  ++ +   E
Sbjct: 209 -----QSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAE 263

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +      L +      A   +E      Q +   A    +L+ + +  + + I SP+
Sbjct: 264 LEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPV 323

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+     ++     Q +Q LM IVP +++     ++  K +  V  G + TV+   + 
Sbjct: 324 DGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFP 383

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             R     A +  I    +  +         ++ LK   +      +EL  G        
Sbjct: 384 YTRYGTIDAELLSISRDSTTDEQLGLVFP-AQIQLKNNHIMIDGQTVELTPGMSVVAEIK 442

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                +   ++ PI +   + 
Sbjct: 443 TDKRRVIDYLLSPIQEYQAEA 463


>gi|237800612|ref|ZP_04589073.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|320324243|gb|EFW80322.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|331023472|gb|EGI03529.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 473

 Score =  249 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 64/427 (14%), Positives = 149/427 (34%), Gaps = 15/427 (3%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           HPA  +      I+    L+ W+ +  I+I  +++G+++       I+S  + +++   V
Sbjct: 52  HPAP-RIFIWAIILFATLLLIWACVGKIDIVATANGKVIPSGKTKIIQSSETAVVRAIYV 110

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            +G  +  G  LL  +       +   +  +   R       + LD +N        A  
Sbjct: 111 NDGQVVKAGQLLLELDSTSADADVGKIESDLLAARIDSARAGAMLDAINGN-----HAPR 165

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           S  + +L    ++     +           +L+   T +     +      + + L+  L
Sbjct: 166 SLADTILGGDPEHVLAAERWLQGQYQEYRSNLEQGETEILQRQADIQAARAQVASLQKTL 225

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
               K     ++L +K  ++++   ++E    ++ L+L   +  Q+  +   N    +A 
Sbjct: 226 PIATKLAQDYEHLLQKQYIARHAYLEKE----QARLDLERQLAVQQISVLQSNAARQQAE 281

Query: 253 LEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                 + +  R     L+Q  +  A    +L+      +  T+ +P+ GT+      + 
Sbjct: 282 RRRDGVVAQTRRAMLDLLQQADQKVASLSQELSKARYQEDLTTVEAPVDGTVQQLNIHTV 341

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP      + A +  K +  V  G   TV+   +   +    +  + 
Sbjct: 342 GGVVTPAQPLMMLVPSDVSVEVEAMLENKDVGFVHVGQDVTVKVETFTFTKYGTIEGEVV 401

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +     + +         ++ LK   L       EL  G             + +  + 
Sbjct: 402 SVSRDAIEDEKRGLLYSS-KIRLKQNHLLVDGKQFELTPGMAVTAEVKTDKRFIIEYFLS 460

Query: 429 PITDNWP 435
           P+  +  
Sbjct: 461 PLKQHMS 467


>gi|170723544|ref|YP_001751232.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida W619]
 gi|169761547|gb|ACA74863.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida W619]
          Length = 394

 Score =  249 bits (637), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 59/405 (14%), Positives = 127/405 (31%), Gaps = 57/405 (14%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +    + +G+++       I+S   GI+ +  V  G  + +G  L   +  +T   +  
Sbjct: 44  EVTEVSTGTGKVIPSSREQVIQSFEGGIVAEMNVAEGDLVERGQVLAQLDPTKTASSVGE 103

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +   +     +   ++ +      +                                  
Sbjct: 104 SEAKYRAATASVARLRAEVTGKPLAFP--------------------------------D 131

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           S+  S  +           R  LE   + +   L   + +L + +NL +  A S+ ++ +
Sbjct: 132 SLRDSPDLIDAETALYQTRRRGLEQTLAGIEDSLRLVRSELQITENLAKMGASSRVEVIR 191

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
             R                       +EL  +AN   ++YL     +L +          
Sbjct: 192 LNR---------------------QRSELELKANEARSDYLVRAREELAKASAEADSLSE 230

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            +     +  + T+ SP+ G +   +  +     Q    +MKIVP  +   I  ++ P+ 
Sbjct: 231 VIRGRSDSLSRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRD 290

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  +     A V+   Y        +  +  I P   Q +   +   YY V ++    + 
Sbjct: 291 IAFIHPDQAAKVKISAYDYSVYGGLEGKVVGISPDTLQDEVKPEI-YYYRVFIRTEQDSL 349

Query: 399 ---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
              +     +  G  A V       T+   +I P+      + ER
Sbjct: 350 QNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRAKEALRER 394


>gi|330944351|gb|EGH46395.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 473

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 64/427 (14%), Positives = 149/427 (34%), Gaps = 15/427 (3%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           HPA  +      I+    L+ W+ +  I+I  +++G+++       I+S  + +++   V
Sbjct: 52  HPAP-RIFIWAIILFATLLLIWACVGKIDIVATANGKVIPSGKTKIIQSSETAVVRAIYV 110

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            +G  +  G  LL  +       +   +  +   R       + LD +N        A  
Sbjct: 111 NDGQVVKAGQLLLELDSTSADADVGKIESDLLAARIDSARAGAMLDAINGN-----HAPR 165

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           S  + +L    ++     +           +L+   T +     +      + + L+  L
Sbjct: 166 SLADTILGGDPEHVLAAERWLQGQYQEYRSNLEQGETEILQRQADIQAARAQVASLQKTL 225

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
               K     ++L +K  ++++   ++E    ++ L+L   +  Q+  +   N    +A 
Sbjct: 226 PIATKLAQDYEHLLQKQYIARHAYLEKE----QARLDLERQLAVQQISVLQSNAARQQAE 281

Query: 253 LEFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                 + +  R     L+Q  +  A    +L+      +  T+ +P+ GT+      + 
Sbjct: 282 RRRDGVVAQTRRAMLDLLQQADQKVASLSQELSKARYQEDLTTVEAPVDGTVQQLNIHTV 341

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP      + A +  K +  V  G   TV+   +   +    +  + 
Sbjct: 342 GGVVTPAQPLMMLVPSDVSVEVEAMLENKDVGFVHVGQDVTVKVETFTFTKYGTIEGEVV 401

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +     + +         ++ LK   L       EL  G             + +  + 
Sbjct: 402 SVSRDAIEDEKRGLLYSS-KIRLKQNHLLVDGKQFELTPGMAVTAEVKTDKRFIIEYFLS 460

Query: 429 PITDNWP 435
           P+  +  
Sbjct: 461 PLKQHMS 467


>gi|158605282|gb|ABW74892.1| secretion protein [Sphingomonas sp. ATCC 53159]
          Length = 464

 Score =  249 bits (636), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 58/427 (13%), Positives = 146/427 (34%), Gaps = 12/427 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R    + +    + + G+     W  +  +E+   + G I        ++SP SGI++
Sbjct: 40  IERPVSPTARLTAKVMLAGLAITAAWLAIGKVEVVAPTQGRIAPIGETKIVQSPESGIVR 99

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++ +G  L+T +   ++      KV++ + +      ++ +D L+ +     
Sbjct: 100 RILVGEGQKVAKGQVLITLDPTVSSAEAAQAKVALLSAQLDAARNQAIIDALDGRGFRFV 159

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               +   ++        +T   +    +  +  +L    +   +      + + +   L
Sbjct: 160 APAAASPGEV--------ATHRGLARARLGQIEAALAGGRSDRGAAVSAAAEAQAQVRKL 211

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L   ++ +   + +  K  VS+  + +  R +     +L         + +    + 
Sbjct: 212 EQSLPLLEQQIAANETMAAKGYVSKLRVVEMRRQLIAERQDLTAARATLAKLGQQSLSVS 271

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             +         ++ +DL + Q         +         + + +P++GT+   Q  + 
Sbjct: 272 SLSAKTREEARAQVLQDLVKAQDEVRARGEDVAKANLRSSFRELRAPVSGTVSQLQVHTE 331

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               + ++PL+ +VP +        V    I  V  G    V+   +   R       + 
Sbjct: 332 GGVVEGAKPLLSLVPDNARLEAEVMVDNSDIGFVHIGMPVKVKLQAFPYTRYGMIPGTVA 391

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            I P   Q   N      Y+  + +           + LR G  A         TL   +
Sbjct: 392 GISPEAVQMKENQ--PPVYKARIALARGYVLAHGAQVPLRPGMLASADIVTGKRTLFSYL 449

Query: 427 IHPITDN 433
           + P+ + 
Sbjct: 450 VGPVLET 456


>gi|299069587|emb|CBJ40859.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum CMR15]
          Length = 390

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 63/428 (14%), Positives = 128/428 (29%), Gaps = 56/428 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             + +  L    I   + W+    ++      G++        I+S   GI+    V  G
Sbjct: 16  RARAILWLICAAIAVFLVWAAFAGLDEVAIGEGKVTPASKGQVIQSLEGGILSDLAVREG 75

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  L T + +     ++     I  L+      ++ +D L    +V      +RE
Sbjct: 76  DVVEAGQKLATLDPVLARSSMEEALERISALQARAARLRAEMDDL---PEVTFPPELARE 132

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + + D   +  +   + F   +++                            LR  L   
Sbjct: 133 KAVTDRERQLFAANRRAFRENVAN----------------------------LREQLRLA 164

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + +L +   L    A ++ ++ + ++   +   +L     E                   
Sbjct: 165 EDELKIAMPLLRTGATNEVEILRLKQRAAEFATKLAATQSE------------------- 205

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y   +  D           +           +  I SP  G +   +  +        
Sbjct: 206 --YYVALKADYATTMADLGPLLKVREGRADQLRRTVITSPARGIVKDIRVSTIGGVVGAG 263

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM+IVP      I A+++P+ I  +  G  ATV+   +         A +E+I P   
Sbjct: 264 GVLMEIVPLDDQLLIEARLSPRDIAFIHPGQEATVKITAFESSIYGSLPAKVERISPDTI 323

Query: 376 QQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           +   + +   YY V                  +  G  A         T+   +I P+  
Sbjct: 324 EDQVDRRV-YYYRVYALTQHAYLETKDGKRHPILPGMVATTEIRTGRRTVLDYLIKPLNR 382

Query: 433 NWPKIFER 440
               + ER
Sbjct: 383 AAEALRER 390


>gi|89067836|ref|ZP_01155280.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Oceanicola granulosus HTCC2516]
 gi|89046434|gb|EAR52490.1| putative protein secretion efflux system, membrane fusion protein
           (hemolysin-type secretion transmembrane protein)
           [Oceanicola granulosus HTCC2516]
          Length = 390

 Score =  249 bits (635), Expect = 8e-64,   Method: Composition-based stats.
 Identities = 62/405 (15%), Positives = 144/405 (35%), Gaps = 53/405 (13%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            + W+   P++  V   GE+++      +++   GI+ +  V  G  + +G  L      
Sbjct: 30  FLVWARFAPLDEIVRGQGEVVSGARPQSVQNLEGGILAELAVGEGDMVSEGDVLARLHGT 89

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +D  +  +          ++ L+                        G++     
Sbjct: 90  QFVTRVDDLRDQVIAAEIRRLRLEAELE------------------------GQFDFVVP 125

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +      +  S +  L   +S Y  RL+        R L +   ++L  +++LF ++ 
Sbjct: 126 EDYAIHSPDILASERALLAARQSDYTTRLE------GARRLATETARELETLEDLFARDI 179

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V+  ++ +  +    +                 ++E+   A LE A    E   DL    
Sbjct: 180 VALLEVTEARKANSDAE--------------TKVSEIETTAELERATSYSETLLDL---- 221

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A    +L + E    +  + +P+ G +      +     +  + + +I+P     ++
Sbjct: 222 ---ATLKQELRLAEDQLARTVVRAPMRGVVNAVGVTTIGGVVRPGEEMFEIIPAGDELFV 278

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A++ PK I +V  G  AT++   Y        +  +E +     + +   +++ +Y V 
Sbjct: 279 EAQIAPKDIANVVAGQAATIKLTAYDYTVHGSLEGTVEMVSADTFKDERRPESEAHYRVT 338

Query: 391 LKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           + +   A       I LR G  A V     + T+   +  P+  +
Sbjct: 339 VALDTDAMTPRQAGISLRPGMQATVELHTGSKTVLDYLTKPLYRS 383


>gi|170702876|ref|ZP_02893721.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria IOP40-10]
 gi|170132212|gb|EDT00695.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria IOP40-10]
          Length = 416

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 55/436 (12%), Positives = 139/436 (31%), Gaps = 63/436 (14%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            + + L     A  +R+  +  + +   + W+    +E    S   +++      I+S  
Sbjct: 27  DLREALLVRSSAGAQRILYVVAVVLGAGLVWAHFARVEEVTRSDATVVSPSREQWIQSLE 86

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLN 121
            GI++   V  G  + +G  L   +                 L+ ++   ++      L 
Sbjct: 87  GGIVQSVAVHEGDVVEKGQLLAKIDPARAQSSYREALSKALELKANVSRARAEAYGGALA 146

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              DV       RE  L+      +    +  +  ++++ +S                  
Sbjct: 147 FPEDV------RREPGLVAQATATYRARRQALDGQVAALTQSR----------------- 183

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                      +  ++++ M + L  K  VS+ ++ +  R       ++ E         
Sbjct: 184 -----------ALVRREIAMAEPLAAKGLVSEVEILRMRRQETDIDAQIAE--------- 223

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                         + +  + S +L + ++  A     L        +  +++P+ G + 
Sbjct: 224 ------------RRSRFTADASTELSRLEQELAQTNEVLVGRADVLARTDVVAPMRGVVK 271

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +  ++    Q  + +M+I P      + A++ P  +  ++ G    V+   Y      
Sbjct: 272 NIRIRTAGGVVQPGEHIMEIAPLDGRVLVEARIKPSDVAFLRPGLPVLVKLSAYDFAIYG 331

Query: 362 KFKAIIEKIDPIISQQDNNLQTQE----YYEVILKITDLAF--SDNNIELRNGFPAEVLF 415
                +  + P   + D           YY ++++    A   +   + +  G  A V  
Sbjct: 332 GLHGHVASLGPDTLKDDQKAAMGRPDANYYRLMVETDSDALVAAGKRLPVLPGMQATVDI 391

Query: 416 TAKNTTLAQEIIHPIT 431
                T+   ++ PI 
Sbjct: 392 RTGEKTVLDYLLKPIF 407


>gi|172064772|ref|YP_001812422.1| HlyD family type I secretion membrane fusion protein [Burkholderia
           ambifaria MC40-6]
 gi|171998257|gb|ACB69173.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria MC40-6]
          Length = 475

 Score =  249 bits (635), Expect = 9e-64,   Method: Composition-based stats.
 Identities = 67/423 (15%), Positives = 150/423 (35%), Gaps = 10/423 (2%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            HPA    M  +  +    L+  ++   ++I  ++ G+++    V  I+   +G+++K  
Sbjct: 54  PHPAPRWTMRFIVALVCTCLLL-AVFGRLDIVATAKGKLIPSARVKVIQPAITGVVRKIH 112

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V +G ++  G PL+  +  +        + +  +        ++ L              
Sbjct: 113 VRDGQRVGAGQPLIELDTTQAAADAQKSRSARIDAALASARARALLAAQQTSTMPHVTEV 172

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +    Q L     +     + ++  ++     L  +          R+  E + + LRA 
Sbjct: 173 DGASPQQLADAQHFADGVYREYSDKLAGARAELIKQEAA-------RMATEQQVAKLRAT 225

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               +++    K+L   N V+++D   +E+   +   EL       + +   + E     
Sbjct: 226 SPLARREANDYKDLAADNYVAKHDYLSKEQTALEQEHELAAQQSHFRELAAGVVEQRAAI 285

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               + + +E    L++  + FA      T  E  +   T+ SP+AGT+      +    
Sbjct: 286 ESIMSQFRREQLDALDKASQQFAQSREDETKAETRQRLLTLYSPVAGTVQQLAVHTLGGV 345

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              +Q LM++VP      + A +  K I  V  G  A V+   +   R       +  + 
Sbjct: 346 VTTAQALMEVVP-DDAVEVEANIENKDIGFVNVGQDAVVKIEAFPYSRYGFLMGKVVAVS 404

Query: 372 PIISQQDNNLQTQEY-YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
               Q  +      +   + L  + +   +  I+L  G            ++A   + P+
Sbjct: 405 NDAIQDRDKKLGLSFMARIRLPSSQMRIENKWIDLTPGMQVTTEIKTGRRSVAGYFLDPL 464

Query: 431 TDN 433
             N
Sbjct: 465 MQN 467


>gi|325275962|ref|ZP_08141799.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           sp. TJI-51]
 gi|324098902|gb|EGB96911.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           sp. TJI-51]
          Length = 394

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 60/405 (14%), Positives = 130/405 (32%), Gaps = 57/405 (14%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +    + +G+++       I+S   GI+ +  V  G  + +G  L   +  +T   +  
Sbjct: 44  EVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMNVAEGDLVERGQVLAQLDPTKTASSVGE 103

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +   +  +      ++ L        +   A      +L++     + T          
Sbjct: 104 SEAKYRAAKAS----QARLQAEVTGKPLAFPASLRDSPELIEAETALYQTR--------- 150

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                              R  LE   + +   L   + +L + +NL +  A S+ ++ +
Sbjct: 151 -------------------RRGLEQTLAGIEDSLRLVRSELKITENLAKMGASSRVEVIR 191

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
             R                       +EL  +AN   ++YL     +L +          
Sbjct: 192 LNR---------------------QRSELELKANEARSDYLVRAREELAKASAEADSLSE 230

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            +     +  + T+ SP+ G +   +  +     Q    +MKIVP  +   I  ++ P+ 
Sbjct: 231 VIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRD 290

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  +     A V+   Y           +  + P   Q +   +   YY V ++    + 
Sbjct: 291 IAFIHPDQAAKVKISAYDYSVYGGLDGKVVGVSPDTLQDEVKPEI-YYYRVFIRTEQDSL 349

Query: 399 ---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
              +  +  +  G  A V       T+   +I P+      + ER
Sbjct: 350 RNKAGKHFAIVPGMIATVDIRTGEKTILDYLIKPLNRAKEALRER 394


>gi|229521546|ref|ZP_04410965.1| membrane-fusion protein [Vibrio cholerae TM 11079-80]
 gi|229341644|gb|EEO06647.1| membrane-fusion protein [Vibrio cholerae TM 11079-80]
          Length = 467

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 67/441 (15%), Positives = 167/441 (37%), Gaps = 16/441 (3%)

Query: 2   HHFMWK----NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           HH+ +      L +  P+   R+T L++ +G++  + W+    +++  +++G ++     
Sbjct: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I+S     +    V +G ++ +  PLLT + +     I       +     +   ++ 
Sbjct: 94  QVIQSYEQSRLLSIHVRDGQRVEKDAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRT- 152

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              LN++    +  F +   +    + + + +    F+  ++S+   +K+  T   +   
Sbjct: 153 --LLNDQLLTHDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAAR-- 208

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                ++    L  L  +  + L   K L +   +   +  +QE+ + ++  ++ +   E
Sbjct: 209 -----QSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAE 263

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            + +      L +      A   +E      Q +   A    +L+ + +  + + I SP+
Sbjct: 264 LEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPV 323

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+     ++     Q +Q LM IVP +++     ++  K +  V  G + TV+   + 
Sbjct: 324 DGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFP 383

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             R     A +  I    +  +         ++ LK   +      +EL  G        
Sbjct: 384 YTRYGTIDAELLSISRDSTTDEQLGLVFP-AQIQLKTNHIMIDGQTVELTPGMSVVAEIK 442

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                +   ++ PI +   + 
Sbjct: 443 TDKRRVIDYLLSPIQEYQAEA 463


>gi|254513358|ref|ZP_05125423.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
 gi|221532362|gb|EEE35358.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
          Length = 446

 Score =  248 bits (634), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 68/433 (15%), Positives = 156/433 (36%), Gaps = 9/433 (2%)

Query: 8   NLKRNHPASLKRMT-LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            +    P  + RM  LL    ++  I WS    ++I V + G+++    V  I+   SG 
Sbjct: 20  EVLETPPNPISRMLGLLIGTLVVSGIAWSYFGRVDIVVVAQGQLVPVGGVKVIQPFESGT 79

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++  +V +G ++  G  L+  +  ++          +     +I   +  LD ++ +   
Sbjct: 80  VRSIEVYDGKRVQAGDVLIELDPTDSLSDAGQLAEELAEASANIARLRVLLDHIDGEEGG 139

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           + +     ++  L             F   +SS    ++       +I     +LE +  
Sbjct: 140 VIEPSAYFDQNKLRVSLYQLQADKIGFEAQVSSFQAEIERNFAEEAAIL---AELEKQ-- 194

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +ALL   +   T + +L EK    +  + +      +++ ++    +    +      
Sbjct: 195 --QALLPLLEVQETELNSLLEKGLTPKQRVLEMRARRIETSQDIIVQQYRLAEIQASTRA 252

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                    A+   E    L + ++TF      L  +E+ +E  ++ +P+ GT+      
Sbjct: 253 QGRTLEKFTADTRSEFVAQLIEAEKTFNQTKLALQTVERQKELNSLKAPVNGTVQQLSIH 312

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       ++PLM +VP      +++K+  K    ++ G  A V+   +   +       
Sbjct: 313 TVGGVVSPAEPLMVVVPSDAELEVKSKILNKDKGFIQPGMQAEVKIDAFPFTKYGTVTGK 372

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           ++ I     +  N     +   V +    L    N+I L  G   +         + + +
Sbjct: 373 LKSISEDAVEDQNLGLVFD-AVVSIDKQQLTIDGNDILLTPGMSVQAELKTGTRRIIEFV 431

Query: 427 IHPITDNWPKIFE 439
           + PI     + F 
Sbjct: 432 LTPILRYKDEAFR 444


>gi|332187611|ref|ZP_08389347.1| type I secretion membrane fusion , HlyD family protein
           [Sphingomonas sp. S17]
 gi|332012359|gb|EGI54428.1| type I secretion membrane fusion , HlyD family protein
           [Sphingomonas sp. S17]
          Length = 367

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 55/420 (13%), Positives = 138/420 (32%), Gaps = 61/420 (14%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +     +  + W+    ++   + SG+++       ++S   GI+ K  V     +  G 
Sbjct: 1   MLTALFVAALGWAWFATLDEVATGSGKVVPTSREQVLQSLEGGILAKMLVRQDDIVKPGQ 60

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L   +  +    ++      +         ++ ++     +     AF   + +     
Sbjct: 61  ILAQLDPTQAGSTVEESAAKYRAALAAQARLQAEVNGTPLTFSPELAAFPELKAE----- 115

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                                      + R     R  L +   L+   L+   +++ + 
Sbjct: 116 ---------------------------QQRLYNARRSSLSSSIGLIDESLALIGREVGIG 148

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           ++L E  A S  ++ + +R   +  L+  +   +                     Y+ E 
Sbjct: 149 ESLIEVGAASNVEVLRLKRQRAELDLKKSDLRSQ---------------------YIVEA 187

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
            +DL +           +     T ++ T+ SP+ G +   +  +       +  +M+IV
Sbjct: 188 RQDLAKVSEEVEALAPVVRGRSDTLQRLTLRSPVRGVVKNIEVSTIGGVIPPNGKIMEIV 247

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P  +   + A+++P+ I  ++ G  A+V+   Y        +  +  I P   + + N  
Sbjct: 248 PLDERLLVEARMSPRDIAFIRPGQRASVKITAYDYAIYGGLEGQVSSISPDTIRDEVNPD 307

Query: 383 TQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
              YY V ++    +    +     +  G  A       + T+ Q ++ P+     +  E
Sbjct: 308 V-YYYRVFIRTRSDSLVNKAGKRFPIVPGMIATADIHTGSKTVLQYLLKPL----NRARE 362


>gi|331007531|ref|ZP_08330695.1| type I secretion membrane fusion protein, HlyD family protein
           [gamma proteobacterium IMCC1989]
 gi|330418662|gb|EGG93164.1| type I secretion membrane fusion protein, HlyD family protein
           [gamma proteobacterium IMCC1989]
          Length = 438

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 65/430 (15%), Positives = 166/430 (38%), Gaps = 6/430 (1%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           ++ +   +K   ++  +     +  + L+ I  ++++ G ++       ++    G IK+
Sbjct: 13  QQQYNHYIKMGFIICGVFFFAAVLSATLINISGAITAKGTVVQIGENKPVQHSKGGPIKE 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E G  + +G  ++  + +     ID K   +K     +      L+ +    D    
Sbjct: 73  LLIEEGDIVKKGDVIIVLDSV----SIDSKLARLKKQEFELSLTLDRLNTMIRGDDNFLI 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             +  E +++++ G   +  S VF    +    ++     R+  +      ++ +    +
Sbjct: 129 DEQKYENEIIEYPGIVDTEQS-VFTAQKNLFKTNVDELNVRLSGLKNEIQAIKKQRQTSQ 187

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             LS   + +T ++ L+++  +S++ L   ER       +L      +   L   NE   
Sbjct: 188 RQLSILDESITELEELYKRQLISKSRLTTLERDKVTVLTQLESLKVTELQKLNTFNETTQ 247

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                     ++I + +E+     A   +++   +    +  I +P++G +      + +
Sbjct: 248 RIEKLAKENKEKIWQQIEKTTEDLAKVQTEIPTTQDDSTRLEIKAPVSGRVHKLIVNNIN 307

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              +   P+++IVP+S    I A+VTP  I+ +  G    +RF  +      +    +  
Sbjct: 308 EVIKAGDPILEIVPNSDNFIIHAQVTPADIEQIYFGQETRIRFDTFNQQSTPEIIGRVLF 367

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           I       D   + ++++ V + +           + +G P   +FT    +L   +I P
Sbjct: 368 ISADSITDDK-AKGEKHFLVKVSLEREQLEKIEATINSGLPVSTMFTTTERSLLNYLIKP 426

Query: 430 ITDNWPKIFE 439
           +++     F 
Sbjct: 427 LSEQLFSAFR 436


>gi|313497168|gb|ADR58534.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida BIRD-1]
          Length = 394

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 63/407 (15%), Positives = 131/407 (32%), Gaps = 61/407 (14%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +    + +G+++       I+S   GI+ +  V  G  + +G  L   +  +T   +  
Sbjct: 44  EVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLAQLDPTKTASSVGE 103

Query: 99  KKVSIKNLRCHIDTEKSALDF--LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            +   +  R      ++ +    L     +L+         L+D     + T        
Sbjct: 104 SEAKYRAARASQARLQAEVTGKPLTFPESLLDS------PDLIDAETALYQTR------- 150

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                                R  LE   + ++  L   + +L + +NL +  A S+ ++
Sbjct: 151 ---------------------RRGLEQTLTGIQDSLQLVRSELKITENLAKMGASSRVEV 189

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            +  R                       +EL  +AN   ++YL     +L +        
Sbjct: 190 IRLNR---------------------QRSELELKANEARSDYLVRAREELAKASAEADAL 228

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
              +     +  + T+ SP+ G +   +  +     Q    +MKIVP  +   I  ++ P
Sbjct: 229 SEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAP 288

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           + I  +     A V+   Y           +  I P   Q +   +   YY V ++    
Sbjct: 289 RDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEI-YYYRVFIRTEQD 347

Query: 397 AF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
           +    +     +  G  A V       T+   +I P+      + ER
Sbjct: 348 SLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRAKEALRER 394


>gi|238790204|ref|ZP_04633980.1| Hemolysin transport protein [Yersinia frederiksenii ATCC 33641]
 gi|238721742|gb|EEQ13406.1| Hemolysin transport protein [Yersinia frederiksenii ATCC 33641]
          Length = 461

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 61/429 (14%), Positives = 142/429 (33%), Gaps = 11/429 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R      + ++ ++ WSI+  ++I  S++G+++  ++   I+    G++ 
Sbjct: 40  VERPVSPLARRTAWFLALTLLSVLAWSIIGKLDIHASANGKVIVSEHSKVIQPFEPGVVA 99

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +G  +  G  L+    I     +D     + +         + L       D   
Sbjct: 100 AIHVRDGDHVSAGQVLIELNPIGIDAEVDNINQQLIHRLLEAAQITALLT------DDPL 153

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             F   E+   + +    S   K  +   + + R           ++    ++ N+ +L+
Sbjct: 154 ANFTYPEDSAENLVMTAKSLLIKKHDEHHAELARQESELAVNQAHMHSAVTNIANQKTLM 213

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           + +     + L  ++ L +  +++  +L  QER    +  E     +E   +      L 
Sbjct: 214 KNIY----QRLQALQTLAKSKSIAAVELLIQEREWLNAQAEASRMQNELAILQAKAGHLT 269

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A   +     L +          +L    + + Q+T+ +P +G I      + 
Sbjct: 270 QTRLHYLAEKKRSYQEQLNKTHEVINQLQQELIKSVERQRQQTLRAPESGVIQQLAVHTL 329

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP      +   +  K +  V  G    V+   +   R       ++
Sbjct: 330 GGVVTTAQPLMVLVPEDYPLELDVMILNKDVGFVLPGQAVEVKVDSFPYTRFGTLSGEVK 389

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I     +            V L    L+     + L  G    V        +   ++ 
Sbjct: 390 HISRDAMEDQQQGLVFP-ARVRLDSDTLSVEGRPVRLSAGMAVSVEIKTGRRRVIDYLLS 448

Query: 429 PITDNWPKI 437
           P+     + 
Sbjct: 449 PLQQYQSEA 457


>gi|304311995|ref|YP_003811593.1| Type I secretion membrane fusion protein (Hemolysin secretion
           protein D) [gamma proteobacterium HdN1]
 gi|301797728|emb|CBL45950.1| Type I secretion membrane fusion protein (Hemolysin secretion
           protein D) [gamma proteobacterium HdN1]
          Length = 451

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 61/424 (14%), Positives = 144/424 (33%), Gaps = 16/424 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P   + +    I   +  + WS    ++I   + G+++  + V +I+   + I+ +  
Sbjct: 28  PAPKFGRSILWAIITLFVIALVWSYFGKVDIVAVAQGKVIPSERVKQIQPLEAAIVSEIH 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLE 128
           V+ GS + +  PL+T +       ++      +     +  +D     L     +   L+
Sbjct: 88  VKEGSFVNKDDPLITLDPTMAVADVNQIDSEWRDAVAQQARVDAFIGWLRSATGEMPTLK 147

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               +   QL           +K+    +      ++  +     +       E +    
Sbjct: 148 GDSRTDPSQL--------EKQNKLLKQEVLEYQAKIESIVQETERLKAELEATEAEVDKQ 199

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             LL   ++ +  ++ L+ K  V++    + ++ + ++   L   I   K +   I    
Sbjct: 200 SRLLPVIKERVEALEILYRKEYVAKVQYLELKQQLIENEQNLAIQIARLKTLKAAILTNK 259

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            + +      LK +           A    +    EK   Q  + +PI+G +      + 
Sbjct: 260 AQLSALKHEQLKNVHTQRNDLDVKIATLYEQKNKAEKRATQYNLKAPISGYVQQLAMNTI 319

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +Q LM+IVP   +  + A V  K I  V++G  A ++   +   +     A + 
Sbjct: 320 GGVVTPAQVLMEIVPEESVLEVEAFVLNKDIGFVQEGQKAEIKIEAFNFTKYGVMHANVA 379

Query: 369 KIDPIISQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            +       D        Y  +L++    +   +  I L  G             + + +
Sbjct: 380 HLSEDAISDDELGLV---YRALLRLDSEKIDIDERKIRLSPGMAVFAEVKTGKRRIIEYV 436

Query: 427 IHPI 430
           + P+
Sbjct: 437 VSPL 440


>gi|37524636|ref|NP_927980.1| hypothetical protein plu0635 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784061|emb|CAE12930.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 471

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 57/424 (13%), Positives = 143/424 (33%), Gaps = 7/424 (1%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L+        R+   +I+G   L + W+ +  IE+   + G+++       I+S  + +
Sbjct: 43  ELQETPVHPAPRIFTWTILGFAVLALLWAYIGKIEVVAIAPGKVVPNGKTKLIQSSETAV 102

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++   V +G  +  G  L+  +    +  +   +  +   R       + LD +N +   
Sbjct: 103 VRAIHVNDGQSVKVGELLVELDPTAASADVSRIQSELLAARIDSARSAAMLDAINQQ--- 159

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             K+  S    + +   +   +  +           +L++    +          + + +
Sbjct: 160 --KSPASLVGTIDNANPEQVLSAQRWLQGQYQEYRSNLELVDAEILQRSAEIQSAQAQVA 217

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LR  L    +     + L +K  VS+++  ++E+       +L              +E
Sbjct: 218 SLRKTLPIATRLAEDYQRLLKKQYVSRHEYLEKEQTRLDLQRQLSVQQASVLQHAAAQDE 277

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                    A   + +    ++  +  A  + +L          ++ +P+AGT+      
Sbjct: 278 ARRRREAVVAQNRRAMLDLQQEANKKVATLVQELAKARYQETLTSLKAPVAGTVQQLAIH 337

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +QPLM IVP  +   + A++  K +  V  G   TV+   +   +       
Sbjct: 338 TVGGVVTPAQPLMVIVPADQSVEVEARLENKDVGFVHVGQPVTVKVETFTFTKYGTVDGE 397

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  +     + + +        + LK   +  +   + L  G             +    
Sbjct: 398 VLNVSNDAIEDEKHGLIYSS-RIRLKSDHVMVNGQRVPLSPGMSITAEIKTDQRRVIDYF 456

Query: 427 IHPI 430
           + P+
Sbjct: 457 LSPL 460


>gi|211970998|dbj|BAG82828.1| membrane fusion protein [Pasteurella pneumotropica]
          Length = 474

 Score =  248 bits (632), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 55/423 (13%), Positives = 153/423 (36%), Gaps = 11/423 (2%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +R + L ++ I+    W+I   ++I  +++G+I    N   I+   + I++K  V +G  
Sbjct: 58  RRSSHLIMVLILITCVWAIFGKVDIVSTATGKIAYSGNSKIIQPIENAIVEKIYVNDGQS 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  LL    +   + +     ++ + +       + L+ + +      K  +     
Sbjct: 118 VEKGELLLELTSLGAKEELQKANQALSSAKLAKVRADALLNSIYSNTPPYLKIDDESISS 177

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +            ++     ++     +     +       + ++ + +  R+L    ++
Sbjct: 178 V------ELQQSRQLILAQFNTYLLQQQKAAALLDQKQAEYITIKMQINKYRSLQKLEKE 231

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
               + NL + NA+S++   +Q+        E+         +   I +  DE  L    
Sbjct: 232 KTNDLANLLKSNAISKHQYLEQKARFLDINNEILTLESRLNEINAEIQQAKDEKELLTNT 291

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           + ++    L Q        + +     + ++   I +P+ G+I      +       +QP
Sbjct: 292 FTRDTQDALRQANEQIKQLVFEKEKYAERQKTTQIKAPVTGSIQQLAVHTIGGVVTTAQP 351

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM +VP      ++A +  + I  + +G   TV+   +   R       ++ +     + 
Sbjct: 352 LMVVVPKHDKLEVKAIIDNQDIGFIHQGQEVTVKIETFPYTRYGYLTGKVKSLSFDAIET 411

Query: 378 DNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
           + +      +  I+++        ++ + L  G            ++   ++ P+   + 
Sbjct: 412 EKSGLA---FAAIIELDKDYLIIENHRVNLTAGMLVNAEIKTGRRSVISYLLSPLQSTFS 468

Query: 436 KIF 438
           + F
Sbjct: 469 ESF 471


>gi|238760421|ref|ZP_04621560.1| Hemolysin transport protein [Yersinia aldovae ATCC 35236]
 gi|238701373|gb|EEP93951.1| Hemolysin transport protein [Yersinia aldovae ATCC 35236]
          Length = 458

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 66/429 (15%), Positives = 141/429 (32%), Gaps = 11/429 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R   L    +  ++ WSI+  ++I  S+SG+++  ++   I+    G++ 
Sbjct: 37  VERPVAPLARRTAWLLAFTLFLVLIWSIVGRLDIHASASGKVIVAEHSKVIQPLEPGVVV 96

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +G ++  G  L+    I     +      + +         + L       D   
Sbjct: 97  AINVRDGDRVDAGQILIELSPIGIDAELGNISQQLMHRHLEAARMAALLT------DDPL 150

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             F   +    + +    +   K  N   + + R                  + N+    
Sbjct: 151 ANFSPPDGSAPNLVSASSALLLKEHNEVSAELSRQESEMAVNQAQFQAGITSVANQ---- 206

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            ALL +  + L  ++ L +  +++Q +L  QER    +  E     HEQ+ +      L 
Sbjct: 207 NALLKNIHQRLEALRTLAKSKSIAQVELLVQEREWLVARAEASRLQHEQEILQAKTYSLA 266

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A   +     L + Q   +    +   L + + Q+T+ +P+AG I      + 
Sbjct: 267 QTRLHYLAEKDRSYRERLNKTQEVISQLQQEQIKLTEKQRQQTLRAPVAGVIQQLAVHTH 326

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP +    +   +  K +  V  G    V+   +   R       ++
Sbjct: 327 GGVVTAAQPLMVLVPENHPLELDVMILNKDVGFVLPGQEVEVKVDSFPYTRFGTLTGEVK 386

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I     +            + L    L      + L  G             +   ++ 
Sbjct: 387 HISRDAMEDQQQGLVFP-ARIRLFSDTLIVEGEPVRLSAGMAVSAEIKTGRRRVIDYLLS 445

Query: 429 PITDNWPKI 437
           P+     + 
Sbjct: 446 PLQQYQSEA 454


>gi|110597469|ref|ZP_01385756.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
 gi|110341013|gb|EAT59484.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
          Length = 392

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 67/427 (15%), Positives = 131/427 (30%), Gaps = 78/427 (18%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R+  + ++    + ++G  G + W+   P++  V   G +        ++    G I+K 
Sbjct: 26  RDTRSPVRLGIWILLVGFGGFLLWAAFAPLDEGVPCQGIVSIATKRKVVEHLRGGSIEKV 85

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVL 127
            V  G  + QG  L+T E        D        +R     +  E      +    D+L
Sbjct: 86  HVREGQMVRQGDLLVTLERQTAKARFDEAHQHYLGIRATADRLHAELRGARSITFHPDLL 145

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                       +   +  S   ++F                                  
Sbjct: 146 NDPDR-------ELAQRNMSNERQLFISR------------------------------- 167

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +  L+     L  + +L ++     +                                 
Sbjct: 168 -QTTLNLLNAQLAGITSLVKEGYAPMSQ-------------------------------- 194

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E  L+ + +    +  L Q       +  K  +L        I SP +G +V  Q  +
Sbjct: 195 QRELELKISEFKSATASQLAQMLLEVEADAVKSKVLAAELADTEIRSPASGQVVGLQVQT 254

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  Q +M IVP ++   I AKV P  I  ++KG    V F  ++   +   + ++
Sbjct: 255 VGAVVQPGQKIMDIVPSNEGLLIDAKVAPHLIDSIQKGLPVDVSFSSFSHSPQLVVQGVV 314

Query: 368 EKIDPIISQQDNNLQTQE---YYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLA 423
           E +   I  +      Q    YY   + +T        + +++ G P  V+      +L 
Sbjct: 315 ESVSKDIITEPQMNPMQPGATYYLARVTVTPQGMRSLGHRQMQPGMPVIVVVKTGERSLL 374

Query: 424 QEIIHPI 430
             +I P+
Sbjct: 375 VYLIDPL 381


>gi|148546072|ref|YP_001266174.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida F1]
 gi|148510130|gb|ABQ76990.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           putida F1]
          Length = 394

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 62/405 (15%), Positives = 129/405 (31%), Gaps = 57/405 (14%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +    + +G+++       I+S   GI+ +  V  G  + +G  L   +  +T   +  
Sbjct: 44  EVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLAQLDPTKTASSVGE 103

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +   +  +      ++ L        +   A       L+D     + T          
Sbjct: 104 SEAKYRAAKAS----QARLQAEVTGKPLTFPASLRDSPDLIDAETALYQTR--------- 150

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                              R  LE   + ++  L   + +L + +NL +  A S+ ++ +
Sbjct: 151 -------------------RRGLEQTLAGIQDSLQLVRSELKITENLAKMGASSRVEVIR 191

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
             R                       +EL  +AN   ++YL     +L +          
Sbjct: 192 LNR---------------------QRSELELKANEARSDYLVRAREELAKASAEADALSE 230

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            +     +  + T+ SP+ G +   +  +     Q    +MKIVP  +   I  ++ P+ 
Sbjct: 231 VIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRD 290

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  +     A V+   Y           +  I P   Q +   +   YY V ++    + 
Sbjct: 291 IAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEI-YYYRVFIRTEQDSL 349

Query: 399 ---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
              +     +  G  A V       T+   +I P+      + ER
Sbjct: 350 QNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRAKEALRER 394


>gi|242279542|ref|YP_002991671.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio salexigens DSM 2638]
 gi|242122436|gb|ACS80132.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio salexigens DSM 2638]
          Length = 471

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 59/410 (14%), Positives = 150/410 (36%), Gaps = 11/410 (2%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           + ++  + W+    I++  ++SG+I+       I+    G++++  V+ G  + +G  L+
Sbjct: 63  LFVVISVLWATFSRIDVVATASGKIIPSGKAKIIQPAEIGVVQQILVKEGQSVKKGDLLI 122

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           + +       I   +  +    C      +   +        +  F    +  L  L ++
Sbjct: 123 SLDPTINEADITEFENQLIRAYCDNILYSALSRWKVGTSVDKKLVFTEGTDSNLKLLYQH 182

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                  F Y   ++   L      +    +++ +L+++     A+L    K    M+ L
Sbjct: 183 R------FEYEAMAINDKLSGINGEIEKDKIHQQNLKHQIKKKFAVLEIITKRTEAMRKL 236

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           +E+++ S++D   QE+    +  +      E++  L  I +L  +     + + ++    
Sbjct: 237 YEQDSASEHDWLFQEQKRVAAEQDYESAKQEEQECLASIEKLERDKKQVISEFRRDTLHK 296

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
               +        +L   ++    + + +P+ G +      +     +++QPLM IVP  
Sbjct: 297 KSDAENMIETLQQRLAKAQQRNRLQQLTAPVDGEVQQLSVHTIGGVVKEAQPLMVIVPEQ 356

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
            +  + A +  + I  VK+G  A V+   +           +  +     Q  +   T  
Sbjct: 357 SVLEVEASILNRDIGFVKEGQLAEVKLEAFPYTEYGSIPGEVMSVSSDAVQDKDGNLT-- 414

Query: 386 YYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
            +   +K+    +  +   + L  G  A      +   L    + P+   
Sbjct: 415 -FLCRVKLNQDFIPVNGQKVRLIPGMRATAEVAIRKRRLITYFLSPLMKY 463


>gi|115353199|ref|YP_775038.1| HlyD family type I secretion membrane fusion protein [Burkholderia
           ambifaria AMMD]
 gi|115283187|gb|ABI88704.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria AMMD]
          Length = 416

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 54/423 (12%), Positives = 130/423 (30%), Gaps = 59/423 (13%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A  + +  L  I +   + W+    +E    S   +++      I+S   GI++   V  
Sbjct: 38  AGAQLILYLIAIVLGAGLVWAHFARVEEVTRSEATVVSPSREQLIQSLEGGIVQSVAVRE 97

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L   +                 L+  +   ++    +   +          
Sbjct: 98  GEVVEKGQLLAKIDPARAQSSYREVLTKALELKASVSRARAEAYGVPLDFP--------- 148

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                                    V R   +      +    R  L+ + + L    + 
Sbjct: 149 -----------------------EDVKRESGLVAQATATYRARRRALDEQVTALEKSQAL 185

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++++ M + L  K  VS+ ++ +  R       ++ E                      
Sbjct: 186 VRREIAMSEPLAAKGLVSEVEILRMRRQSTDIAAQIAE---------------------R 224

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            + +  E S +L + ++  A     L        +  +++P+ G +   +  ++    Q 
Sbjct: 225 RSRFTAEASTELSRLEQELAQTNEVLAGRADVLARTDVVAPMRGVVKNIRIRTAGGVVQS 284

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + +M+I P      + A++ P  +  ++ G    V+   Y           +  + P  
Sbjct: 285 GEHIMEIAPLDGRVLVEARIKPSDVAFLRPGLPVLVKLSAYDFSIYGGLHGHVVSLGPDT 344

Query: 375 SQQDNNLQTQE----YYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            + D           YY ++++    A   +   + +  G  A V       T+   ++ 
Sbjct: 345 LKDDQKAAMGRPDANYYRLMVETDSDALAAAGKRLPVLPGMQATVDIRTGEKTVLDYLLK 404

Query: 429 PIT 431
           PI 
Sbjct: 405 PIF 407


>gi|26987539|ref|NP_742964.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           putida KT2440]
 gi|24982210|gb|AAN66428.1|AE016271_1 protein secretion ABC efflux system, membrane fusion protein
           [Pseudomonas putida KT2440]
          Length = 394

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 62/405 (15%), Positives = 128/405 (31%), Gaps = 57/405 (14%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +    + +G+++       I+S   GI+ +  V  G  + +G  L   +  +T   +  
Sbjct: 44  EVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLAQLDPTKTASSVGE 103

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +   +  R      ++ L        +           L+D     + T          
Sbjct: 104 SEAKYRAARAS----QARLQAEVTGKPLTFPESLRDSPDLIDAETALYQTR--------- 150

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                              R  LE   + ++  L   + +L + +NL +  A S+ ++ +
Sbjct: 151 -------------------RRGLEQTLAGIQDSLQLVRSELKITENLAKMGASSRVEVIR 191

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
             R                       +EL  +AN   ++YL     +L +          
Sbjct: 192 LNR---------------------QRSELELKANEARSDYLVRAREELAKASAEADALSE 230

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            +     +  + T+ SP+ G +   +  +     Q    +MKIVP  +   I  ++ P+ 
Sbjct: 231 VIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRD 290

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  +     A V+   Y           +  I P   Q +   +   YY V ++    + 
Sbjct: 291 IAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEI-YYYRVFIRTEQDSL 349

Query: 399 ---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
              +     +  G  A V       T+   +I P+      + ER
Sbjct: 350 QNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRAKEALRER 394


>gi|27381403|ref|NP_772932.1| hemolysin secretion protein D [Bradyrhizobium japonicum USDA 110]
 gi|27354571|dbj|BAC51557.1| hlyD [Bradyrhizobium japonicum USDA 110]
          Length = 513

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 58/450 (12%), Positives = 142/450 (31%), Gaps = 30/450 (6%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                +  + P+ + R    SII +  + + W+ L  ++I  +++G+I+       I+  
Sbjct: 66  PAALEITESPPSPIGRAIGGSIIAVFCVALLWASLGSVDIVATATGKIVPGGRTKLIQPF 125

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G+++   V +G  +  G  L+  +   T    + ++  +      +   ++AL     
Sbjct: 126 ETGVVRAIHVRDGQSVKAGDVLIELDPTMTEADQERQRSDLVAAELDVARLRAALTS--- 182

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             D L      +   + +          +      +     L     +       R    
Sbjct: 183 --DPLAAFRSPQGASVAEV-----EMHRQFLISQRAEQSAKLAEIERQQGQKEAERATTS 235

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              + L+A +   Q+ + + K L +K   S+     + + +     +L            
Sbjct: 236 ASVAKLQATIPVLQERVDIRKGLVDKALASKVIYLSEYQELVGLQQDLVLQQSRLGEADA 295

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I  L +      A Y +     L + ++  A    ++   E+  + + + +P+ G +  
Sbjct: 296 AIALLKETKERTAAEYRRATYDALAKAEQKAASAAQEVVKAERRTKLQHLTAPVDGVVQQ 355

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +       +Q L  +VP      I A ++ + I  V  G  A ++   +   R   
Sbjct: 356 LAVHTVGGVVTPAQALAIVVPSESQLEIEAMLSNRDIGFVHPGQKAEIKVDTFNFTRYGL 415

Query: 363 FKAIIEKIDPIISQQDNNLQTQEY-----------------YEVILKITDLAF--SDNNI 403
               +  +      +D      +                  Y   + +        D  +
Sbjct: 416 LNGDVLSVSTDAITRDRQGGPNDRASGTAQGSSEPKGQELEYAARISLDRTHMQVEDKLV 475

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           +L  G    V        +   ++ P+   
Sbjct: 476 KLGPGMAVTVEIKTGARRIISYLLSPLARY 505


>gi|171058442|ref|YP_001790791.1| HlyD family type I secretion membrane fusion protein [Leptothrix
           cholodnii SP-6]
 gi|170775887|gb|ACB34026.1| type I secretion membrane fusion protein, HlyD family [Leptothrix
           cholodnii SP-6]
          Length = 518

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 57/431 (13%), Positives = 143/431 (33%), Gaps = 63/431 (14%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             +    P +L  + LL  I ++ ++ W+    I++   + G+++ +     I S   GI
Sbjct: 136 AQVNEGTPRALWVLYLLCAI-VVSVLVWATRAQIDVVTKAEGKVVPDAREQVIASLEGGI 194

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNK 123
           ++   V  G+ +  G  L+  +        +  +     +R     +  E      +   
Sbjct: 195 LRALHVREGAIVEAGDELVQLDPTRMVAQQNEGQARQTAMRGTVARLQAEVHGRPLVFPP 254

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              ++ A  + E +  +   +                                    L+ 
Sbjct: 255 EVRVDTAVVAAETEAYNARRRL-----------------------------------LDE 279

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             ++ R  +S    +L M   + E+  +S+ ++ +  R      ++++E I+        
Sbjct: 280 AVTVTRRSISLIDNELGMATYMSEQGLMSEVEVMRLRRQRNDLQIQVQERIN-------- 331

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                         + ++ S +L + +        +  + E   ++  + SP+ G +   
Sbjct: 332 -------------RFRQDASTELLRLRTELTLIGEQQVVKEDALKRTVLKSPLRGIVKNI 378

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +          +M+IVP +    + A++ P  I  ++ G  A ++   Y        
Sbjct: 379 RINTLGGVVPAGGAIMEIVPITDRVLVEARIKPADIGFIQLGMPAEIKLSAYEYYTYGGL 438

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNT 420
           K  IE + P     +       YY   ++             + +  G  A V     + 
Sbjct: 439 KGTIEYLSPDALTDERGGPDSSYYRARIRTDASHLRGKGDRALAVLPGMVANVEIRTGDR 498

Query: 421 TLAQEIIHPIT 431
           T+ + ++ P+ 
Sbjct: 499 TVMEFLLKPML 509


>gi|254446784|ref|ZP_05060259.1| auxiliary transport protein, MFP family, putative [Verrucomicrobiae
           bacterium DG1235]
 gi|198256209|gb|EDY80518.1| auxiliary transport protein, MFP family, putative [Verrucomicrobiae
           bacterium DG1235]
          Length = 424

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 75/434 (17%), Positives = 155/434 (35%), Gaps = 14/434 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
              K       K   +  +  ++ +I   I + I  +V+S G ++       ++    G 
Sbjct: 2   SEFKERQRRFEKLGVVACLGFVLAVIVCGIFIRISGAVTSVGYVVQTGENKAVQHAEGGS 61

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V+NG  +  G PLL       T   D+    +K  R  ++   + L  L    + 
Sbjct: 62  VAEIFVKNGDLVEMGDPLLILNAASVTSQYDI----LKKRRFELEVTIARLKALTAGDET 117

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                E     ++        T   +F         +      RM  +      L+ ++ 
Sbjct: 118 FRYDGEVEYPDIV-------LTQESIFQAHKDRTLSAQTQLEVRMNGLESELAALQKQTK 170

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L    + +  ++ LF++  VS+  L    R       EL      +  +    N+
Sbjct: 171 TSSQQLEFLSESIEEVQELFDEQLVSKARLTALRRDRVAVLSELDALALSEARIRNAYND 230

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              ++NL       ++ R++E  +    +  S L   +  + +  + +P +G +   +  
Sbjct: 231 ARQQSNLLKMEEFSDLWREMELAREQMNEVSSSLDATQDRQSRLVVSAPASGRVHELEIR 290

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +        Q +M+IVP S+   + A+V+P  ++ V +G    VRF  +      +    
Sbjct: 291 NVEAVVSPGQTIMEIVPVSEGPTVIARVSPMDVEQVYEGQQVRVRFDTFDSKTTPEVLGE 350

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQE 425
           +  I P     +     + YYEVI+ + D   +      +  G P   L T +  +L   
Sbjct: 351 VLGISPDRITDE--ASGEIYYEVIVNLPDEEVAKIKTGIIIPGLPVTALLTTEERSLLDY 408

Query: 426 IIHPITDNWPKIFE 439
           ++ P+       F 
Sbjct: 409 LLKPLRVQLFSAFR 422


>gi|260220505|emb|CBA28109.1| hypothetical protein Csp_A05640 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 389

 Score =  246 bits (629), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 70/422 (16%), Positives = 151/422 (35%), Gaps = 63/422 (14%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
             +IG++  + W+    I+  V + G+++ +D    I+    G+++  +V  G  + +G 
Sbjct: 20  FLLIGVVSFVVWANYFHIDQLVRAQGQVIVKDRTQVIQVADGGVLRDLRVSEGEIVHKGQ 79

Query: 83  PLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            L   E        D  +  +  L   +   D E S                       L
Sbjct: 80  VLAMLESERAHAGADEVENRLAGLSISKARADAEASDA---------------------L 118

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
              GKY  T   +      +V R L ++         NR  +  + S L        ++ 
Sbjct: 119 PAWGKYQKTHPHLV-----AVQRELYLQ---------NRAAVAKEVSALTEHHKLALEEY 164

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + + LF+   +S+ +L + +R+                       E   + N  +  Y 
Sbjct: 165 QVNERLFQSGDISRVELMRAKRM---------------------TIEAEQKINAIWDKYR 203

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            +  R++ + Q     + S+L   +   +  T+ SP+ G +   +  +     +Q   LM
Sbjct: 204 TDARREIAKIQEEITSQQSRLQERQSVLDHTTLESPVDGIVKSLRISTLGGVLRQGDELM 263

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-SQQD 378
           +I P +    + AKV+P  I  ++ G    ++F  +       +K  +  I P   ++Q 
Sbjct: 264 QISPTNSQILVEAKVSPADIGLIELGQPVILKFDAFDYSIYGSWKGELTYISPDTLTEQG 323

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
            + +   +Y V + I +     + ++   ++ G    +       ++   I  PI   + 
Sbjct: 324 PDGRPNTFYRVQVNIAEHENKGSKVDYGHIKPGMTVSLDILCSQRSVLFYIAKPIVKAFS 383

Query: 436 KI 437
             
Sbjct: 384 GA 385


>gi|329903522|ref|ZP_08273535.1| Type I secretion membrane fusion protein, HlyD [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548305|gb|EGF32996.1| Type I secretion membrane fusion protein, HlyD [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 437

 Score =  246 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 65/430 (15%), Positives = 150/430 (34%), Gaps = 14/430 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            R        + + S + ++ LI W+ L P++  V + G I+       ++    GI+  
Sbjct: 19  ARRLRLPRSVLVIASALAVL-LIVWATLAPVDKVVRTQGRIVPSVKPQLVQHLEGGIVST 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V  G  + +G  L+   D+        K+  +  L+  I    +  D        +  
Sbjct: 78  VFVREGDVVAKGDSLVAVSDLMANSSRGEKRARLNGLKARIARLSAEAD--GQSQVGVTA 135

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                  ++L        + ++ F      + ++ ++   ++        +L+ +   L 
Sbjct: 136 GLSPAAAEVL--------SENETFVARQGRLRQTRRILEEQLTQKRQEAAELDARRKGLA 187

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A     ++ L ++  +  +NA SQ +L + +  V +   ++RE       +     EL  
Sbjct: 188 AEAGVARQQLALVGTMMARNAASQFELLEAQARVERLATQIREAETALPRLASAALELQA 247

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                 A +  E    L + +         +   +    +  + +P+AGT+    + +  
Sbjct: 248 RLAETGAQFRSESQSSLTETKVELQRLEQDMKAEDDRVNRTVVTAPVAGTVNKLLANTVG 307

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              +  + L+++ P      I A+ TP +   ++ G  A VR   +         A + +
Sbjct: 308 GVIRPGETLLELTPADGAVVIEARATPAERGPLQVGQRAVVRVAAFDYTVFGTLPARVTE 367

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           I       +     + Y+ + L +   +    +  L  G            T+AQ ++ P
Sbjct: 368 ISADSLTDER---GERYFRIGLLVDAASQRHFDRPLTPGSAVTADLVTGQRTVAQYLLSP 424

Query: 430 ITDNWPKIFE 439
           +       F 
Sbjct: 425 LRGLASTAFR 434


>gi|294142149|ref|YP_003558127.1| HlyD family secretion protein [Shewanella violacea DSS12]
 gi|293328618|dbj|BAJ03349.1| HlyD family secretion protein [Shewanella violacea DSS12]
          Length = 473

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 67/440 (15%), Positives = 145/440 (32%), Gaps = 17/440 (3%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                ++   PA   R  L SI+ + + LI W+    I+I  ++ G+I+    V  I+  
Sbjct: 29  PAALEIQAAPPAKWSRSLLWSIMALMLVLIAWASWAEIDIIATAQGKIVPSGQVKIIQPL 88

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDF 119
            +G++K   V+ G  +  G  L+  ++  +    D      +             + LD 
Sbjct: 89  ETGVVKTIFVKEGQHVKAGDKLIALDNTSSQADADRLSSEWQGYIEDLARQQAFLARLDA 148

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           + +   V  KA                     +           L    + +  +   + 
Sbjct: 149 IVSSAKVNTKANAIALSVTTSTTPPLPVNQRLLLESVWQEYQSKLNSFTSEITKLTAEKK 208

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            ++     +   L    +      +L   +AVS+N   + +    +  ++  E +  Q  
Sbjct: 209 SIKIDVGRIEKTLPLVIERERSYYSLLGTSAVSRNQYLELK----QQRIDQEETLLLQGA 264

Query: 240 MLRHINELYDEANLEFANYLKEISR----DLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            +  IN   + A      YL E  R    ++ Q  R       +LT   +  + + + SP
Sbjct: 265 KVEQINASIESAKHNLYAYLSESRRNTLQEINQLTRQSESTNQELTKANRLTQLRVLTSP 324

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK----LTYIRAKVTPKQIQHVKKGYTATVR 351
           + G +      +       +Q L+ IVP  +       + A +  K I  V  G    ++
Sbjct: 325 VDGIVEELVIATIGCVVTPAQELLHIVPIGEYGRQQLEVEAGLLNKDIGFVHTGQIVEIK 384

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              +   +       +  I     + +         +  L   ++  +   ++L+ G   
Sbjct: 385 IDSFPFTKYGVIDGEVTGISADAIEHEQLGLLFP-LKASLATDEINVNGKWVKLKPGMSV 443

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V        L + ++ P+ 
Sbjct: 444 TVEIKTGTRRLMEFLLAPLM 463


>gi|32170819|gb|AAP57695.1| putative secretion protein [Sphingomonas elodea]
          Length = 464

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 57/427 (13%), Positives = 148/427 (34%), Gaps = 12/427 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R    + +    + + G+     W  +  +E+   + G I        ++SP SGI++
Sbjct: 40  IERPVSPTARMTGRVMLAGLAITGAWLAIGRVEVVAPTQGRIAPIGETKIVQSPESGIVR 99

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++ +G  L+T +   +       +V++ + +      ++ +D L+ +     
Sbjct: 100 RILVGEGQKVTKGQVLITLDPTMSAADAAQARVALVSAQLDAARNQAIIDALDGRGFRFA 159

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              ++   ++         T   +    ++ +   L    +   +      + + +   L
Sbjct: 160 APADASAAEV--------ETHRGLARARLAQIEAILATGRSDSGAAVSAAAEAQAQVRKL 211

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L   ++ +   + +  K  VS+  + +  R +     +L         + +      
Sbjct: 212 EQSLPLLEQQIAANEAMAAKGYVSKLRVVEMRRQLISERQDLTAARASVARLGQQSRSAS 271

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            ++         ++ ++L + Q        ++         + + +P++GTI   Q  + 
Sbjct: 272 SQSVRTREEARAQVLQELVKAQDDVRARTEEVAKASLRSSFRELRAPVSGTISQLQVHTE 331

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               + ++PL+ +VP +        V    I  V+ G    V+   +   R       + 
Sbjct: 332 GGVIEGAKPLLSLVPDNARLEAEVMVENGDIGFVRTGMPVKVKLQAFPYTRYGMIPGTVV 391

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEI 426
            I P   Q  +       Y+  + +       N   + LR G  A         TL   +
Sbjct: 392 GISPEAVQVRDGQ--PPVYKARIALDRGYILANGARVPLRPGMVASADIVTGKRTLLSYL 449

Query: 427 IHPITDN 433
           + P+ + 
Sbjct: 450 VGPMLET 456


>gi|94498286|ref|ZP_01304846.1| Type I secretion membrane fusion protein, HlyD [Sphingomonas sp.
           SKA58]
 gi|94422288|gb|EAT07329.1| Type I secretion membrane fusion protein, HlyD [Sphingomonas sp.
           SKA58]
          Length = 433

 Score =  246 bits (627), Expect = 7e-63,   Method: Composition-based stats.
 Identities = 69/427 (16%), Positives = 149/427 (34%), Gaps = 15/427 (3%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               +  + +  ++  I W+ L  I+ +V ++G ++    +  + +   G++++  V+ G
Sbjct: 18  PANIILWIILAFVLVAIGWAALTEIDRTVRANGRVIPSSQLQVVSNLEGGVVEQIMVKVG 77

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + QGTPL+    ++    ++    S   L   I    + +     K+     A  + +
Sbjct: 78  QDVRQGTPLVRLSPVQPGAELEGNLASSDALNFKIVRLTAEITGQTPKFPQSRNAMMAAQ 137

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             +             ++   ++ +     +   R+        +         A   + 
Sbjct: 138 IAV----------EQGLYRSRMAELASISNVASARVDQARRAIAEASAAEQARIAARDAA 187

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q DL +++ L  +    +  L Q E     ST E              + E    A  + 
Sbjct: 188 QADLNLVRPLVREGIEPRRSLLQAESSYAVSTSEAAGAAAALARARSVLAEAQASAQQQR 247

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            ++L   + +L   +   +   + +   E    +  + +P+ G I      +     +  
Sbjct: 248 RDWLTRAADELTAARADLSVRQATMPAYEYKLRRTVVRAPLDGRINRVFVTTVGGSVRPG 307

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+++V  +    I A V  K I  VK G  A V+   Y        K  +  + P   
Sbjct: 308 DSLLEMVAINDTLLIEAAVAAKDIASVKLGQQAKVQISAYDSAVYGSMKGKVVAVSPDAV 367

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
              N    + +Y V ++ T  A +D+    + +  G  AEV       T+   I+ P+T 
Sbjct: 368 --LNERTGESHYLVRVRTTANAITDDAGRRLPIGPGMGAEVNLLGDKRTVLAYILTPLTR 425

Query: 433 NWPKIFE 439
                F 
Sbjct: 426 LSETAFR 432


>gi|1314576|gb|AAC44069.1| unknown [Sphingomonas sp. S88]
          Length = 464

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 57/427 (13%), Positives = 145/427 (33%), Gaps = 12/427 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R    + +    + + G+     W  +  +E+   + G I        ++SP SGI++
Sbjct: 40  IERPVSPTARLTGRVMVAGLAITTAWLAIGRVEVVAPTQGRIAPIGETKIVQSPESGIVR 99

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++ +G  L+T +   +       +V++ + +      ++ +D L+ K     
Sbjct: 100 RILVGEGQKVQKGQVLITLDPTMSAAEAAQARVALLSAQLDAARNQAIIDALDGKGFRFA 159

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               +   ++         T   +    +  +   L    +   +      + + +   L
Sbjct: 160 APAAAGAAEV--------ETHRGLARARLGQIEAMLAGGRSDSGAAASASAEAQAQVRKL 211

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L   ++ +   + +  K  VS+  + +  R +     +L         + +      
Sbjct: 212 EQSLPLLEQQIAANEAMAAKGYVSKLRVVEMRRQLISERQDLTAARATVAKLGQQSRSAS 271

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             +         ++ +DL + Q        ++         + + +P++GT+   Q  + 
Sbjct: 272 SMSIRTREEARAQVLQDLVKAQDDVRARSEEVAKANLRSSFRELRAPVSGTVSQLQVHTE 331

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               + ++PL+ +VP +        V    I  V+ G    V+   +   R       + 
Sbjct: 332 GGVVEGAKPLLSLVPDNARLEAEVMVDNSDIGFVRTGMPVKVKLQAFPHTRYGMIPGTVV 391

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            I P   Q          Y+  + +       +  ++ LR G  A         TL   +
Sbjct: 392 GIAPEAVQV--KEGQPPVYKARIALDRGYVIANGGHVPLRPGMIASADIVTGKRTLLSYL 449

Query: 427 IHPITDN 433
           + P+ + 
Sbjct: 450 VGPMLET 456


>gi|254430123|ref|ZP_05043826.1| HlyD family secretion protein domain protein [Cyanobium sp. PCC
           7001]
 gi|197624576|gb|EDY37135.1| HlyD family secretion protein domain protein [Cyanobium sp. PCC
           7001]
          Length = 472

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 60/425 (14%), Positives = 139/425 (32%), Gaps = 19/425 (4%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             L+    +     +    W+ L PI   V +SGE++ E  V  ++    GI+ K  V +
Sbjct: 60  RYLRLSLYILGAAALIFFPWAALTPITQVVQASGEVIPEGEVNVVQHLEGGIVAKVDVAD 119

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++ +G  +L              +  + NL       ++A+                 
Sbjct: 120 GEEVTKGEVMLELRPNLVESEYKATEQQLNNLLAQQKQLQAAIRG--------------- 164

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E   +   GK       + N  I +    +     ++         L N+ S  +  +  
Sbjct: 165 ERVFVAEPGKVADAQRNLLNSRIDNRTDEIDRIQAQVDQKRAEITGLNNQISRFQREIQL 224

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           +++   M  +L    A S+ +L   E+ +  +  +L E +  +    + + E        
Sbjct: 225 YREQRQMYADLVATGAASRLNLLNVEQQLAAANTKLAELVGARNEATKLLAEAEANLRSL 284

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            +    E +  + Q     A     +  +    ++  I++P+ G +   +  +       
Sbjct: 285 QSGIRLEQNSQIAQLVNEEAVVAENIKKVRNQLDRTKIVAPVDGVVSDLRFKAPGAVIGP 344

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              ++ +VP+     +  +V    I  V+ G    V+   +           +  I    
Sbjct: 345 GAVVLSVVPNGTKRLVEVRVPSSDIGFVRPGQAVDVKLQPFDSSIYGSVPGRVMTIAAST 404

Query: 375 SQQDNNLQTQEYYEVILKITDL--AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            Q  ++ +   YY+  +++        +    ++ G P          ++ + I  P T 
Sbjct: 405 VQDPDDRR--YYYKARIQLDRQFVDVQNRKYPIQVGMPLVADIKGPQRSVLRYIFQPFTR 462

Query: 433 NWPKI 437
                
Sbjct: 463 TLDSA 467


>gi|156977666|ref|YP_001448572.1| hypothetical protein VIBHAR_06454 [Vibrio harveyi ATCC BAA-1116]
 gi|156529260|gb|ABU74345.1| hypothetical protein VIBHAR_06454 [Vibrio harveyi ATCC BAA-1116]
          Length = 457

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 69/439 (15%), Positives = 157/439 (35%), Gaps = 20/439 (4%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             +  +    P+   R    +I   + L + WSI+  ++I  S+ G+++   +   I++ 
Sbjct: 30  PAYLEIIEKPPSPWSRRIAFTIATFLLLVLIWSIVGRLDIHASAQGKVMVSSHSKVIQAL 89

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G + +  V NG  + QG  L+           +  ++S +++R  ++  +       N
Sbjct: 90  EQGEVVEINVRNGQFVRQGDVLIQLNP--AGANAESTRLSEQHVRYQLNKARLLALLSPN 147

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY-LNRLDL 181
                    E+   Q+                  + S Y+  +  L R+ +   +NR +L
Sbjct: 148 PMQSFTPPREATPAQITAS------------QQHLQSEYQETQQMLERLNAERDVNRAEL 195

Query: 182 ENKSSLLRALLSSHQK---DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           E     ++AL    Q     L   + L E NA+++ DL +QE+       ++     +Q 
Sbjct: 196 EANQQGIQALNKLKQNIVTRLHARRALMESNAIARVDLLEQEKEWLDVERDISNMQAQQA 255

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +    + L ++     A    E   +L Q     A+   +L   ++ +  + + SP+ G
Sbjct: 256 ILKAKASSLVEQRETLLAQKRLEYYDELNQIDGQIAEIEQELIKAKERQRIQALRSPVDG 315

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +      +    A  ++PLM IVP +        +  K +  V  G    ++   +   
Sbjct: 316 VVQQLAIHTLGGVASPAEPLMVIVPQNADLEAEVNILNKDVGFVMAGQPVEIKIDSFPFT 375

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +       +  +     + +          + L+   +   D  + L  G          
Sbjct: 376 KYGTIPGELLYVSKDAVEDERLGPVFP-ARIRLERDQILVDDTWVTLGAGMSLNAEIKTG 434

Query: 419 NTTLAQEIIHPITDNWPKI 437
           +  + + ++ P+     + 
Sbjct: 435 SRRIIEYLLSPLQQYQSEA 453


>gi|148264597|ref|YP_001231303.1| HlyD family type I secretion membrane fusion protein [Geobacter
           uraniireducens Rf4]
 gi|146398097|gb|ABQ26730.1| type I secretion membrane fusion protein, HlyD family [Geobacter
           uraniireducens Rf4]
          Length = 472

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 53/448 (11%), Positives = 153/448 (34%), Gaps = 35/448 (7%)

Query: 9   LKRNHPASLKRMTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L+   PA L R  L +  I    ++ W++L  ++I   + G+++ +  +  ++    GI+
Sbjct: 37  LQEKPPAPLGRTVLKVVAILFCCVLLWAVLGRLDIVAVAEGKLVPKTYLKIVQPSEQGIV 96

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
           ++  V+ G  + +G  L+  + + +T            LR     ID E +         
Sbjct: 97  EEIMVKEGQSVTKGQLLMRMDAVLSTAEGKSLASEFHRLRLALRRIDAELAGRPLTRESN 156

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D  +                  +  S  ++    +   ++  + + +     +       
Sbjct: 157 DPPD----------------LFAQVSAQYHTNRQAHQSAIDEQQSVLERASQDMASAREI 200

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            + L   L  +++     ++LF+   V++   ++++R   +   +L+   +  K+    +
Sbjct: 201 KAKLEQTLPHYREMEKAYEDLFKVGTVAKLQFSEKQRDRIEKEHDLKTQEYTLKSNQALM 260

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +         A+  +++  +  +          +L   +   +   + +   G +    
Sbjct: 261 AQTLKNMAQLTADNRRQLQTERVETMGQLEKITQELAKQQHRHQLLELKASNDGVVKDLA 320

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           + ++         LM +VP  +       V+ + I  V+      V+   ++  +     
Sbjct: 321 THTAGTVVTPGTILMTLVPKEEPLQAEVWVSNEDIGFVRPDQPVKVKLSAFSFQKYGMLD 380

Query: 365 AIIEKIDPIISQQDNNLQTQE-------------YYEVILKITDLAF--SDNNIELRNGF 409
             +E++    S+  N   T +              Y+ ++ ++           +L  G 
Sbjct: 381 GKVEQVSADSSENPNQSGTIDSTTSVPPRDLSRLRYKTLIALSTQQLIADGQKHKLTPGM 440

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
                      ++ + +  P+T  + + 
Sbjct: 441 QVSAEIKLGTRSVVEYLFSPVTKAFHEA 468


>gi|326326122|ref|YP_004250932.1| putative RTX Secretion protein (RtxD) [Vibrio nigripulchritudo]
 gi|323669174|emb|CBJ93231.1| Putative RTX Secretion protein (RtxD) [Vibrio nigripulchritudo]
          Length = 467

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 68/431 (15%), Positives = 165/431 (38%), Gaps = 12/431 (2%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L +  P+   R+T +S+ IG++  + W+    +++  ++SG ++       I+S     
Sbjct: 44  ALSQRPPSPFARVTAISLSIGVVMALLWAYWGKLDVQATASGRLVVSGRSQVIQSYEQSR 103

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V +G  + +GTPLLT + +     I       +     +   ++ +D  N   + 
Sbjct: 104 VIAIHVADGQLVSKGTPLLTLDTLGVNQEISRLLTQSEFQTHEMLRYEALVD--NQPLEN 161

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                    EQ L  L  Y S   +           +L      M+   ++++  ++   
Sbjct: 162 HATFLALPHEQQLQLLNSYQSEKRE--------FEATLANIHAEMQVNRVSQVARQSDID 213

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L AL+++  + L   + L + + + + +  +QE+ + ++  E+ +   + K +      
Sbjct: 214 ALSALVTNISERLAARQALNQVHVIGKVEYLEQEKELLETQREVTQQTAQLKVLHSQYLS 273

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L ++ +       ++      Q +        +L+ + +  + + + SP+ GTI      
Sbjct: 274 LEEKLSGFKVQQQRQWLEKQRQARLQLTALTQELSKVREREQLEIVRSPVNGTIQQLSVH 333

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q +Q LM IVP + +     ++  K +  +  G   T++   +   R    +A 
Sbjct: 334 TLGAVLQPAQNLMVIVPDNTVKLAEVQILNKDVGFIHSGQPVTIKVDAFPYTRYGTIQAE 393

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  +    +  +         +V LK  +++     +EL  G             +   +
Sbjct: 394 LVSVSRDSTTDERLGLVFP-AQVRLKKNNISVEGQAVELTPGMSVVAEIKTDQRRVIDYL 452

Query: 427 IHPITDNWPKI 437
           + PI +   + 
Sbjct: 453 LSPIREYQSEA 463


>gi|88813486|ref|ZP_01128721.1| Membrane-fusion protein [Nitrococcus mobilis Nb-231]
 gi|88789276|gb|EAR20408.1| Membrane-fusion protein [Nitrococcus mobilis Nb-231]
          Length = 456

 Score =  244 bits (622), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 62/439 (14%), Positives = 156/439 (35%), Gaps = 7/439 (1%)

Query: 4   FMWKNLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                ++   P+ + R     I +  +  + WS    I+I  +++G+I+    V  I+  
Sbjct: 23  PAALEVQETPPSPVGRAIAAGIGLLFLIAVVWSYFGHIDIVATAAGKIVPSGQVKIIQPM 82

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
               ++  +V  G  +  G  L+ F+   +    +  +  +      +D  +        
Sbjct: 83  AQATVRAIRVREGQHVAAGEVLVEFDPTISAAERNRLREQLAA--ARLDRARLVAMLTVT 140

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +     +A  +      D      +T  ++ +  ++    SL      +      R   E
Sbjct: 141 ERATPAEALATAWPTGAD--PAAITTHRRLMHSALAEQRASLAALQAELARARAERQSTE 198

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                L ++L    +    ++ L  +    + D  Q E+        +R      + +  
Sbjct: 199 RDKRRLESILPLIAQRAHALEVLARRKMAPKLDYLQIEQQRLDHAGHIRTIAARLQALDA 258

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I E      ++ A + K++++ L ++++  A    +L   +      T+ +PIAG +  
Sbjct: 259 RIEEDRRRIEVQRAQFQKDLAQRLLESEKQIASLQEELRKADARTGWNTLDAPIAGFVQG 318

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  ++    Q ++ LM+IVP +    ++A +  + +  V  G  A V+   +   R   
Sbjct: 319 LKIHTTGGVVQPAEELMRIVPENAPLEVQAWLANRDVGFVNTGQLAEVKVETFPFTRYGT 378

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
             A + ++     Q ++     +     +    +  +   + L  G    +        +
Sbjct: 379 LHAEVTQVSNDAVQDEHRGLVYQ-TTARIDRAWMNVNGRRVHLSPGMTVSLEVKTGRRRV 437

Query: 423 AQEIIHPITDNW-PKIFER 440
              ++ P+ ++      ER
Sbjct: 438 LDFLLAPLIEHIDESARER 456


>gi|238792139|ref|ZP_04635774.1| Hemolysin transport protein [Yersinia intermedia ATCC 29909]
 gi|238728376|gb|EEQ19895.1| Hemolysin transport protein [Yersinia intermedia ATCC 29909]
          Length = 461

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 61/429 (14%), Positives = 144/429 (33%), Gaps = 11/429 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R      + ++ ++ WSI+  ++I  S+ G+++  ++   I+    G++ 
Sbjct: 40  VERPVAPLARRTAWFLALTLLLVLIWSIVGKLDIHASAKGKVIVSEHSKVIQPLEPGVVA 99

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +G ++  G  L+    I     +      + +          A            
Sbjct: 100 AINVRDGDKVEAGQILIELNPIGIDAEVGNINQQLMH------RLLEAARLAALLTANPS 153

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             F   +    D +    +   K  N   + + R           I     ++ ++    
Sbjct: 154 AMFNPPDNSPDDLVSTARALLRKEDNEVNAELSRQESEMAVNQAHIQAGLTNIAHQ---- 209

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +AL+ +  + L  ++ L +  A+++ +L  QER    +T E     +EQ  +    + L 
Sbjct: 210 KALMENIHQRLEALRTLAKSKAIAEVELLLQEREWLSATAEANRLHNEQAILQAKAHHLS 269

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A   +     L +          +   L + + Q+++ +P+ G I      + 
Sbjct: 270 QTRLHYLAEKKRSYQERLNKAHEIINQLRQEQIKLLEKQRQQSLRAPVTGVIQQLAIHTL 329

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP S    +   +  K +  V  G    V+   +   R       ++
Sbjct: 330 GGVVTTAQPLMVLVPESHQLELDVMILNKDVGFVLPGQAVEVKVDSFPYTRFGTLSGEVK 389

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +     +            + L    L+    ++ L  G    V        +   ++ 
Sbjct: 390 HVSRDAMEDQQQGLVFP-ARIRLNSDRLSVEGKSVRLSAGMAVSVEIKTGRRRVIDYLLS 448

Query: 429 PITDNWPKI 437
           P+ +   + 
Sbjct: 449 PLQEYQSEA 457


>gi|159045042|ref|YP_001533836.1| secretion protein [Dinoroseobacter shibae DFL 12]
 gi|157912802|gb|ABV94235.1| secretion protein [Dinoroseobacter shibae DFL 12]
          Length = 439

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 60/417 (14%), Positives = 132/417 (31%), Gaps = 12/417 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             L  + LL +      + W+    IE    + G ++   +   +++   GI+ +  V  
Sbjct: 25  RGLTAILLLIMALAGVGLVWAGWATIEEVSRADGRVVPSGSARGVETLEGGIVAEILVAE 84

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++  G  L+  +D   +  +         LR      ++ L          + A    
Sbjct: 85  GDRVDAGQELVRIDDTGASADLGELAARRAALRARALRLEAELG---------DAAAVDF 135

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
               L            +F+   +S      +   ++        +L N  +     L+ 
Sbjct: 136 APAGLAADDPLALRERALFDSRRASYVSQRAVLEAQVLQRRQEITELTNGLARSDESLAL 195

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             +++ + +N      + +  +   ER       E       +      + E        
Sbjct: 196 LDEEIAIREN---SGVIPRAQIIPVERERTGMRSERDRLDSRRAQAEAALMEAEARLTEL 252

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                 EI+ +  Q     A  +  +   E    +  + +P+ G +      S       
Sbjct: 253 DLLRRAEINAERSQTLNDLAIILESIRRAEDVVTRAALRAPVTGVVSALNVSSQGEVVTP 312

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + +++IVP      I A++ P+ I  V+ G  A V+   +           + ++    
Sbjct: 313 GEEVLRIVPEGTGLEIEARLRPEDIAFVRPGLPAKVKITAFDFTIYGALPGHVVRVGADA 372

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            Q D+  +T     +  + T L      +E+R G  A V       T+   ++ P  
Sbjct: 373 EQDDSTGETFFPIIIQTEETQLTRGQEVLEIRPGMVASVDILTGERTVLDYLLKPFR 429


>gi|254513024|ref|ZP_05125090.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
 gi|221533023|gb|EEE36018.1| type I secretion membrane fusion protein, HlyD family
           [Rhodobacteraceae bacterium KLH11]
          Length = 465

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 67/440 (15%), Positives = 162/440 (36%), Gaps = 16/440 (3%)

Query: 4   FMWKNLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                +    P+ L R T  +I + ++  + W+ L  +++  ++ G++   ++V  I+  
Sbjct: 36  PAALEIMERPPSPLGRATAWAIGLFMLIALVWASLGRVDVVATAQGKLAPREHVKLIQPV 95

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++++  V +G  +  G  L+  +   ++   +  +  +   R      ++ L +L++
Sbjct: 96  DYGVVREILVNDGQSVKAGDVLVALDPTASSADEEQARHELMVARIDQARGEALLRYLDS 155

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                       E +L D +    S   +         Y++ +  L + R      L + 
Sbjct: 156 GE---------IELELPDGISASTSLMQRQLIDAHLGAYKAQEATLKQQRLEAEADLGVV 206

Query: 183 -NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
             + + L   L   ++ L   K L EK    +    + +     +   L     +   M 
Sbjct: 207 LQEIAKLTDTLPLIEEQLAARKELSEKGLSPRFVYLELQERFVSARQNLEIQREQIDKMQ 266

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I  +  + +   + + ++I  +L  ++         L    + R+ + + SP+ G + 
Sbjct: 267 AAIAAIDRQVDQLRSEFREQIVVELTTSEDKVDMLSEGLRKASQRRQLQQLKSPVDGVVQ 326

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +     Q +Q LM +VP      + AK+  + I  V+ G    V+   +      
Sbjct: 327 QLAIHTVGGVVQPAQALMVVVPGDGELVLDAKLLNRDIGFVETGDPVEVKLEAFPFTTYG 386

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKN 419
               ++E I     Q +N       Y+  +++    ++  D  + L +G  A V      
Sbjct: 387 VLNGVLEDISTDAIQDENQGLV---YQARVRLLEDRISVGDKEVNLTSGMAATVEVKIGQ 443

Query: 420 TTLAQEIIHPITDNWPKIFE 439
             + + ++ P+     + F 
Sbjct: 444 RRIIEFLLSPLLRYKQESFR 463


>gi|229825050|ref|ZP_04451119.1| hypothetical protein GCWU000182_00400 [Abiotrophia defectiva ATCC
           49176]
 gi|229790797|gb|EEP26911.1| hypothetical protein GCWU000182_00400 [Abiotrophia defectiva ATCC
           49176]
          Length = 507

 Score =  244 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 78/492 (15%), Positives = 161/492 (32%), Gaps = 59/492 (11%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                +    PA L R  +  +  I+G  I W+ +  ++      G+++    V  I+  
Sbjct: 17  PAALEISETPPAPLGRAVIWIVFLIVGAAILWAYIGKVDEVAVGRGKVVPAGRVKVIQPA 76

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GII    V  G  + +G  L+  +       ++  + SI   +  I+  K      + 
Sbjct: 77  MEGIITAIHVTEGQPVKKGQLLIELDRTMKETDVEGLQKSIDTAKLEIELLKKVSSERDL 136

Query: 123 KYDVLEKAFESR-EEQLLDFLGKYHS---TCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
              VL    E   +  LL+F+    S   T  +     +      LK+    ++ +    
Sbjct: 137 GKAVLSSDLEDEIKNDLLEFVQAKESEYTTRQESLKLAVDQSEEQLKIAEYDLKKLENKL 196

Query: 179 LDLENKSSLL-----------------RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           +    K+  L                    +   ++     K L+E  + ++N+   +  
Sbjct: 197 IISNEKAESLENIVKTGGVEAANLVKMEESIKILKELDKKYKRLYESGSAAKNEWLAKHN 256

Query: 222 IVYKSTLELREN----------------------------IHEQKNMLRHINELYDEANL 253
            +  +  E                                I  QK  +R       E   
Sbjct: 257 ELTLAQKEYEAQKIRAAREKVTLETEQNNANDEVSLAEKEIQIQKIRVRQAESRLKETKN 316

Query: 254 EFANYLKEISRD----LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
              +  KE S      + +  R  ++  S L  + K  E +++ +P  GT+    S +  
Sbjct: 317 SINSLEKERSTSTLSLIVEKNRQISELESSLEKIRKGMEFQSLYAPEDGTVQGMASNTIG 376

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                +QP+M IVP+     + A +  K +  V+ G  A+V+   +   +    K  IE 
Sbjct: 377 GVVTPAQPVMSIVPNDTPLIVEASLLNKDVGFVEVGQEASVKIDTFPFQKYGTVKGKIES 436

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEII 427
           I P   + +        Y++ + +   +   +  N+ +  G             + +  +
Sbjct: 437 ISPDAFEDEKLGTV---YKMKVSLEKQSMMVNGKNVHIVPGMTVSAEIKTGERRIIEFFL 493

Query: 428 HPITDNWPKIFE 439
            PI     +  +
Sbjct: 494 EPIIRYADESLK 505


>gi|34495969|ref|NP_900184.1| HlyD family secretion protein [Chromobacterium violaceum ATCC
           12472]
 gi|34101823|gb|AAQ58191.1| probable HlyD family secretion protein [Chromobacterium violaceum
           ATCC 12472]
          Length = 473

 Score =  243 bits (621), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 51/415 (12%), Positives = 142/415 (34%), Gaps = 8/415 (1%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +    + +      + W+++  ++I   + G+ ++      I+     ++K   V +G  
Sbjct: 58  RWSMRVIVALFACALLWALIGQLDIVAVAGGKTVSGGRTKIIQPLEPSVVKAIHVRDGQL 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +     L+  +             +++  R      ++ L  L+N      +  +  +  
Sbjct: 118 VKASQLLIELDATAAGADNRKAGDALETARLAAARYQALLAALDNGRLPQLEKLDGVDPA 177

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                        + +     ++  +L+ +   + +     + L+    L  A    +Q+
Sbjct: 178 KQLSEETLAIGQWRAYQAKRDALQATLRQREAELSTTRQQVIKLQGTVRLAEAREHDYQE 237

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                  L +KN +S++    +++   +   +L       + +   I    +E     AN
Sbjct: 238 -------LLDKNFISKHAYLDKQQARIEQQGDLASQQSRIQELAAAIASQREELQALTAN 290

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  +    L + +        ++    + +    + +P+AG++      +      ++QP
Sbjct: 291 FRSDALDKLREAREQAMQSGEEVKKTGRRQALTQLTAPVAGSVQQLAIHTVGGVVTEAQP 350

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L+ +VP ++   + A++  K I  V+ G   TV+   +   R      ++E +     Q 
Sbjct: 351 LLAVVPANETLEVEAQIENKDIGFVRPGQAVTVKVESFPYTRYGYLDGVVETVSHDAQQD 410

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           +          + LK   L      ++L  G             +    + P+ +
Sbjct: 411 EKRGLLFP-ARIRLKQNHLVIDGARVKLSAGMAVSAEIKTGKRRVIDYFLSPLRE 464


>gi|84517210|ref|ZP_01004565.1| Type I secretion membrane fusion protein, HlyD [Loktanella
           vestfoldensis SKA53]
 gi|84508885|gb|EAQ05347.1| Type I secretion membrane fusion protein, HlyD [Loktanella
           vestfoldensis SKA53]
          Length = 436

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 56/428 (13%), Positives = 145/428 (33%), Gaps = 12/428 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           + +++      S   +    ++ ++ +  W+    I+      G +++      +++   
Sbjct: 9   LSRDMAGREGLSGSTILATIVVLVVSIGIWANWAEIDNVTRGEGRVISSVQNQLVQAAEG 68

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +  V   + +     L   + I+++  ++     +  L       ++ ++      
Sbjct: 69  GVILRRFVSENTIVAADEILFEIDPIDSSSELNRLNQRLTGLDVKESRLRAEIEGSEFDP 128

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                A                 T   +F    + +   + +   R++    + +  EN 
Sbjct: 129 PNHVSAMSPLVTL----------TEQSLFAARRAELAGRIAVLEQRLQQRSQDLVAAENV 178

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           S      ++  Q+++ +++ L   N V    L +  R + ++  +              +
Sbjct: 179 SGTAERTVALLQEEIELVEPLVRDNIVPATRLLELRRQMEQARGDGERAAVSIAQAGSGM 238

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            EL  E      NY      +L       ++    L  LE+   +  I +P+ G +    
Sbjct: 239 AELEAEIANARDNYTLRAMDELNDVVAEQSELREALPKLEERVSRTIIRAPMEGIVSRLN 298

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +   +      ++++VP  +   + A++ P+ I  ++      +R   Y   +     
Sbjct: 299 FRTPGGFVATGDVMLELVPTGEALVVEARIMPQDISRIRLDDDVRIRLSAYDSSKYGSVA 358

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTL 422
             + +I P     + N      Y V + I      D+   + L  G  A V   +   T+
Sbjct: 359 GRVIEISPDAVADEQNPNAASSYLVEVAIEGELRVDSGEIVTLIPGMTATVDVLSGKRTV 418

Query: 423 AQEIIHPI 430
            + I  P+
Sbjct: 419 LEYIWQPV 426


>gi|221200504|ref|ZP_03573546.1| membrane spanning export protein [Burkholderia multivorans CGD2M]
 gi|221206184|ref|ZP_03579198.1| membrane spanning export protein [Burkholderia multivorans CGD2]
 gi|221174196|gb|EEE06629.1| membrane spanning export protein [Burkholderia multivorans CGD2]
 gi|221179845|gb|EEE12250.1| membrane spanning export protein [Burkholderia multivorans CGD2M]
          Length = 390

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 70/446 (15%), Positives = 137/446 (30%), Gaps = 62/446 (13%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M  F W        A  + +  L +  +   + WS+   ++      G++        I+
Sbjct: 1   MSDFTWSARGAREAAHARPVLWLIVAALFVFLVWSVFAGLDEVAVGEGKVTPASKGQIIQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSAL 117
           S   GI+ +  V  G  +  G  L T + +     ++     I  L+     +  E + L
Sbjct: 61  SLEGGILSELAVREGDVVDAGQTLATLDPVLARSSMEETLERITALQGRAARLHAEMNDL 120

Query: 118 DFLNNKYDVL-EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
             +    ++  EKA   RE QL                                      
Sbjct: 121 PSVAFPAELANEKAVTERERQLF-----------------------------------VA 145

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           NR       + LR  L   +++L +   L +  A ++ ++ +  +   + + +L     E
Sbjct: 146 NRRAFRENVANLREQLRLAEEELRIALPLLKTGATNEVEVLRLRQKAAEFSTKLAATQSE 205

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                                Y   +  D  +        +           +  I SP 
Sbjct: 206 ---------------------YYVALKADYSKTMADLEPLLKVREGRADQLRRTVIRSPA 244

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   +  +     Q    LM+IVP      I A+++P+ I  +  G  ATV+   + 
Sbjct: 245 RGIVKDIRVSTVGGVVQPGGVLMEIVPLDDQLLIEARLSPRDIAFIHPGQEATVKITAFE 304

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVL 414
                   A +E+I P   +   + +   Y   +L               +  G  A   
Sbjct: 305 PSIYGSLPAKVERISPDTIEDQVDRRVYYYRVYVLTQHAYLETRDGKRHPILPGMVATAE 364

Query: 415 FTAKNTTLAQEIIHPITDNWPKIFER 440
                 T+ + ++ P+      + ER
Sbjct: 365 IRTGRRTVFEYLVKPLNRAAEALRER 390


>gi|207721637|ref|YP_002252076.1| typeIsecretion system protein [Ralstonia solanacearum MolK2]
 gi|206586798|emb|CAQ17383.1| typeIsecretion system protein [Ralstonia solanacearum MolK2]
          Length = 488

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 62/453 (13%), Positives = 143/453 (31%), Gaps = 39/453 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++   P+   R  + SI+G++ + I WS +  I +  ++ G+ + +  + +I+   +  
Sbjct: 44  EIQETPPSPAHRKVMWSIVGLVVISIVWSCIGQIAVVATAPGKFIPDGRIKQIQPLEAST 103

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           IK   V+ G  +  G  LL  +   +   +          R       + L      Y  
Sbjct: 104 IKAIHVQEGQHVRAGDLLLELDPAISGAALQASSDKYAYNRLEQARLAAELTHAAPDYRN 163

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            + A+ + +E         ++   +     +     SL                 +   +
Sbjct: 164 ADPAWVALQESTRAAREAAYTAKREQARSQVEEKTHSLAAA--------------QATLT 209

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             R   +  ++  +  + L E  A+S+ D  Q ++ +  +  +L             + E
Sbjct: 210 KYRENTAISEERESSARPLVESGAISRVDYLQLKQELTSNRNDLAAQSKTVDEQRAALQE 269

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                     ++  E+   L             +    +  + K + +P+ G +      
Sbjct: 270 AQKRLAEVEHDHQAEVYGQLSDKVANEPGLRGDMEKSRQLHDLKWLKAPVDGWVQKINVT 329

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +Q LM IVP      + A ++   I +VK G    ++   +   +    K  
Sbjct: 330 TVGGVVNPAQTLMTIVPDGMPLVVEATLSNDDIGYVKVGQPVELKVDTFPFQKYGTLKGT 389

Query: 367 IEKIDPI--------ISQQDNNLQTQE--------------YYEVILKITDLAF--SDNN 402
           +  + P         IS ++    +Q                Y+V ++     F      
Sbjct: 390 LVWVSPDAEEKSSASISDENGAGGSQPEKAIQNVKSVKDGYVYKVRIRAERSGFVVDGKP 449

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             L+ G   +         + +  + PI     
Sbjct: 450 AALQAGMTVQADIATDRRRVIEFFLSPIIKYLS 482


>gi|84386483|ref|ZP_00989510.1| RTX toxin transporter [Vibrio splendidus 12B01]
 gi|84378588|gb|EAP95444.1| RTX toxin transporter [Vibrio splendidus 12B01]
          Length = 453

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 66/427 (15%), Positives = 166/427 (38%), Gaps = 12/427 (2%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L +  P+   R+T +++ +G++ ++ W+    +++  +++G  +       I+S     
Sbjct: 30  ALSQRPPSPFARLTAITLSLGVMAVLLWAYWGKLDVQATATGRFVVSGRSQVIQSYEQSR 89

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V++G ++ +G PLLT + +     I       +     +   +S    L    D+
Sbjct: 90  VLSIHVKDGQRVDKGAPLLTLDTLGINQDITRLITQSEYQTNELVRYRSLNSGLPLSKDL 149

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L     S ++ L++   + H +  + +   ++S+   + +      +        ++  +
Sbjct: 150 LFSTLPSAQQTLIN---ENHLSEKREYESTLASIKAEMHVNNASQAAR-------QSDIN 199

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L  L  +  + L   K L +   +   +  +QE+ + +   ++ +   E + +    + 
Sbjct: 200 ALIQLTENISQRLAARKTLNQIKVIGHVEYLEQEKELLEVQRQVSQQRAELEVLKSQYHS 259

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L +      A   +E     +Q +        +L+ + +  + + I SP+ GT+     +
Sbjct: 260 LEERLTGFKAQKQREWLEKRKQAKLQLVGLAQELSKVREREQLEIIRSPVDGTVQQLSIY 319

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q +Q LM IVP + +     ++  K +  V  G + TV+   +   R    +A 
Sbjct: 320 TLGAVLQPAQNLMIIVPGNSVQQAEIQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIEAE 379

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  I    +  +         +V L   ++  +  ++EL  G             +   I
Sbjct: 380 LLSISRDSTTDERLGLVFP-AQVKLINNNILINGESVELTPGMSVVAEIKTDKRRVIDYI 438

Query: 427 IHPITDN 433
           + PI + 
Sbjct: 439 LSPIREY 445


>gi|221066744|ref|ZP_03542849.1| type I secretion membrane fusion protein, HlyD family [Comamonas
           testosteroni KF-1]
 gi|220711767|gb|EED67135.1| type I secretion membrane fusion protein, HlyD family [Comamonas
           testosteroni KF-1]
          Length = 464

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 59/440 (13%), Positives = 154/440 (35%), Gaps = 16/440 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                N +      L R   L   GI  L+ + +  P+E  V +SG+++  D V  ++  
Sbjct: 36  DAAQANERAGLWRHLSRKQKLLGGGIAALVLFGLFYPVENVVVASGQVIPSDRVQTVQHL 95

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDF 119
             GI+ K  V  G  + +  PLL  +   ++   + +  ++ + + ++  +  E      
Sbjct: 96  EGGIVTKVHVREGQAVTRSQPLLEIDLGGSSLNLEQLTARQATAEAVKTRLTAESQGH-- 153

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                 VL+  +            +  +  S+   +  +           ++     +  
Sbjct: 154 ------VLKAEYFPTSLDPQIVQAEIGAFASRTLEHQGTQASAQ-----AQLMQAQGDVA 202

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             + +   L   L  H+++  + + L  +  + Q ++  ++R +     +L        +
Sbjct: 203 QAQARIQGLETSLRLHEQEAAISRQLAAEQLIGQLEVIDKQRALELVRTDLAAARQILVS 262

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               I +   +       + +  S +L Q +R        ++  +  R +  +L+P  G 
Sbjct: 263 NRAKIEQAQAKKLETQGAFRRRASDELAQTERELLSLAEDISRAKSQRTRTIVLAPTEGV 322

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +   +S  +    +  + ++++VP      + A++ P    +V  G +  V+   Y  +R
Sbjct: 323 VKGLRSSGTGWVVKPGEAILEVVPVKDEVIVEAQLNPADRGYVHTGQSTKVKISAYDFLR 382

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               K  +  +     +  +      Y+ +   +        +  +  G  AE+     +
Sbjct: 383 YGYVKGHVTLVSADADRDRSQPNASSYFRIQASLDQPWVGRTDNRITTGMQAELDLLLGH 442

Query: 420 TTLAQEIIHPITDNWPKIFE 439
                 ++ P+     + F 
Sbjct: 443 EPFIWYLLRPMLRIQSEAFR 462


>gi|332289987|ref|YP_004420839.1| HlyD family secretion protein [Gallibacterium anatis UMN179]
 gi|330432883|gb|AEC17942.1| HlyD family secretion protein [Gallibacterium anatis UMN179]
          Length = 475

 Score =  243 bits (619), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 69/427 (16%), Positives = 158/427 (37%), Gaps = 6/427 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +++   A  + +  L ++  I  + W+IL  +EI  S+ G++        I+S  + I+K
Sbjct: 49  IEKPVSALPRWIARLIMLLTIIAVIWAILGKVEIVASAMGKLTYTGKSKVIQSVETAIVK 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +G ++ QG  LL+   +      +  K ++K+ R  +   ++ L+ +  K     
Sbjct: 109 GIFVRDGQKVTQGQRLLSLTTLGVEADFEKTKKALKDARLAVARNEALLEAMATK----- 163

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           K+        L+           +     ++  +  +   + ++     R     +    
Sbjct: 164 KSPTLILPNGLNTTDVDVVNAQNLIEEQFNTYIKQREQAESLLKQREAERETALYQVEKY 223

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           + L       L  +K+L+EK+A+S++   +QE  V +   ELR   ++   +   I    
Sbjct: 224 QGLEKIEAIRLNDLKSLYEKSALSKHSFFEQETKVIEIRNELRSQQNKLVEIEASIKHAR 283

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D  +L   ++ +++   L Q +      + +   L + +   +I SP+ GT+      + 
Sbjct: 284 DAYDLLLFSFRRDMQDALRQAREQVEQLVFEEQKLAQRQSTTSINSPVTGTVQQLNVHTI 343

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +Q LM IVP      + A ++   I  ++ G   T++   +   R       + 
Sbjct: 344 GGVVTDAQNLMVIVPEEDKLEVTASISNSDIGFIEVGQPVTIKIEAFPYSRYGYITGTVR 403

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +     +  +         + +    L      I L  G             +   ++ 
Sbjct: 404 SVSFDAIEDKDLGLVFSS-IISINQDYLIIEGKKIPLSAGMRVTAEIKTGKRRVISYLLS 462

Query: 429 PITDNWP 435
           P+ +   
Sbjct: 463 PLQETLS 469


>gi|78186559|ref|YP_374602.1| metalloprotease secretion protein [Chlorobium luteolum DSM 273]
 gi|78166461|gb|ABB23559.1| metalloprotease secretion protein [Chlorobium luteolum DSM 273]
          Length = 393

 Score =  243 bits (619), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 62/430 (14%), Positives = 137/430 (31%), Gaps = 78/430 (18%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++   ++ +IG  G + WS L P++  V  +G +        ++    GI++   V  G 
Sbjct: 33  IRLGVIVLLIGFGGFLLWSALAPLDEGVPCNGSVTVSTKSKVVEHLHGGIVQAVHVHEGE 92

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFES 133
            + +G  LLT  D +              LR     +D E+     +    DV+      
Sbjct: 93  MVDEGALLLTLTDEDALARYREVYERYLVLRATEGRLDAEERGAGRIIFHRDVVGSPDVQ 152

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
               +++                               R+++  R+D+          + 
Sbjct: 153 LAASIME-----------------------------NQRALFAARVDV----------VH 173

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + ++ L  +K +     ++     + E                                 
Sbjct: 174 ALRQRLIGVKAMVADGYMTMYQQLELE--------------------------------E 201

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A+   + + +    Q        K   +    +++ + SP +G +V  +  +      
Sbjct: 202 RLADLDSQRASERADIQMQVDAFAKKTLAMRDELKRRELRSPASGQVVGLKVQTVGAVIT 261

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             + +M+IVP  +   +   V P+ I  +  G  A VRF  +A         ++E +   
Sbjct: 262 PGETVMEIVPLDESLMLEVHVDPQLIDRISTGLPADVRFYSFAHSPMMMVDGVVESVSHD 321

Query: 374 IS---QQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           +     +D  +    YY   + +T           L+ G P +V+      +L   ++HP
Sbjct: 322 LLFDQSRDPRMPGASYYLARISLTREGMQSLGTHRLQAGMPVQVVIKTGERSLLTYLLHP 381

Query: 430 ITDNWPKIFE 439
           +        +
Sbjct: 382 LMQRMSASLK 391


>gi|38482512|gb|AAR21116.1| putative toxin transporter [Photorhabdus luminescens]
          Length = 463

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 58/429 (13%), Positives = 149/429 (34%), Gaps = 11/429 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R  +   + +  ++ WSI   ++I  +++G +L   +   I+S   G I 
Sbjct: 42  VERPPAPWARRTAIALTLFLXVVLLWSIGGRLDIHANATGRLLVSSHSKVIQSLEPGEIV 101

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +G ++  G  L+    I     +  ++  +   R  +   ++ L     ++  ++
Sbjct: 102 AIHVRDGQKVKAGDVLIKLNPIGVEAELKERQEQLNFKRLELARLQALLTETPTEHFAVQ 161

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           ++    + +L            +        +  +L+     M     N+       + L
Sbjct: 162 ESIPQAQVELA----------REHLVSIWKEMVANLESLDGEMNVNQANQSARNADITEL 211

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             LL++ +  L   + L     + + +L +QE+   +    L +   E   +      L 
Sbjct: 212 EKLLTNIKVRLEARRTLAASKLLPKVELLEQEKEKLEIERILSQQYAELAVLKAQYQVLE 271

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +  N       +E    L + Q   A    +L    + +  +++ +P+ G +      + 
Sbjct: 272 ESRNRYLTKTRREYYDQLNEAQTAVAVMTQQLIKAGEKQRLQSLRAPVDGVVQQLAIHTL 331

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q +Q LM IVP          V  K +  V  G    ++   +   R    +  + 
Sbjct: 332 GGVVQSAQQLMVIVPDDTPLEAEVMVLNKDVGFVHAGQPVEIKVDSFPYTRYGTIRGKVA 391

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +     + +         ++ ++ + +A  ++ + L+ G             +   ++ 
Sbjct: 392 HVSKDAVKDEQLGLIFP-AQIQMERSSIAMDEHEVPLQAGMSITAEIRTGERRVIDYLLS 450

Query: 429 PITDNWPKI 437
           P+     + 
Sbjct: 451 PLQQYQSEA 459


>gi|221209557|ref|ZP_03582538.1| membrane spanning export protein [Burkholderia multivorans CGD1]
 gi|221170245|gb|EEE02711.1| membrane spanning export protein [Burkholderia multivorans CGD1]
          Length = 390

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 70/446 (15%), Positives = 136/446 (30%), Gaps = 62/446 (13%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M  F W        A  + +  L +  +   + WS+   ++      G++        I+
Sbjct: 1   MSDFTWSMRGAREAAHARPVLWLIVAALFVFLVWSVFAGLDEVAVGEGKVTPASKGQIIQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSAL 117
           S   GI+ +  V  G  +  G  L T + +     ++     I  L+     +  E + L
Sbjct: 61  SLEGGILSELVVREGDVVDAGQTLATLDPVLARSSMEETLERITALQGRAARLHAEMNDL 120

Query: 118 DFLNNKYDVL-EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
             +    ++  EKA   RE QL                                      
Sbjct: 121 PSVAFPAELANEKAVTERERQLF-----------------------------------VA 145

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           NR       + LR  L   + +L +   L +  A ++ ++ +  +   + + +L     E
Sbjct: 146 NRRAFRENVANLREQLRLAEDELRIALPLLKTGATNEVEVLRLRQKAAEFSTKLAATQSE 205

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                                Y   +  D  +        +           +  I SP 
Sbjct: 206 ---------------------YYVALKADYSKTMADLEPLLKVREGRADQLRRTVIRSPA 244

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   +  +     Q    LM+IVP      I A+++P+ I  +  G  ATV+   + 
Sbjct: 245 RGIVKDIRVSTVGGVVQPGGVLMEIVPLDDQLLIEARLSPRDIAFIHPGQEATVKITAFE 304

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVL 414
                   A +E+I P   +   + +   Y   +L               +  G  A   
Sbjct: 305 PSIYGSLPAKVERISPDTIEDQVDRRVYYYRVYVLTQHAYLETRDGKRHPILPGMVATAE 364

Query: 415 FTAKNTTLAQEIIHPITDNWPKIFER 440
                 T+ + ++ P+      + ER
Sbjct: 365 IRTGRRTVFEYLVKPLNRAAEALRER 390


>gi|149916317|ref|ZP_01904837.1| secretion protein, HlyD family [Roseobacter sp. AzwK-3b]
 gi|149809771|gb|EDM69623.1| secretion protein, HlyD family [Roseobacter sp. AzwK-3b]
          Length = 434

 Score =  242 bits (618), Expect = 9e-62,   Method: Composition-based stats.
 Identities = 67/437 (15%), Positives = 145/437 (33%), Gaps = 20/437 (4%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLIT----WSILLPIEISVSSSGEILNEDNV 56
           M    +K L R+            ++ I  LI+    W+    ++      G I++    
Sbjct: 1   MSDIDFKTLSRDMAGHEGLSGSAILVTIAALISVLLFWASYAELDNVTRGEGRIVSSVQN 60

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTE 113
             I++   G+I +  V   + ++    L   + I+ +  ++     +  L      +  E
Sbjct: 61  QMIQAAEGGVILRRYVSENTHVVTDQVLFELDPIDASSELNRTGKRMAALNIKEARLRAE 120

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            S   F+              E  L         T   +F    + +  ++ +   R + 
Sbjct: 121 ISGDPFV-------------LEAALRSQAPTVALTEESLFAARKAELAGTISVLEQRKQQ 167

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
              +    E  +   +  ++  ++++ +++ L   N      L + +R   ++  +   +
Sbjct: 168 RKQDFQAAEAGALTAQRTMALLEEEIQVVEPLVRDNIAPATRLLELQRQFEQARGDRDRS 227

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                     I EL +E       Y      +L       ++    L  LE+   +  I 
Sbjct: 228 RVSMDQAKSGIQELENEIENAREAYTLTAMEELNGAVAEKSELQEALPRLEERVSRTVIR 287

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P+AG I      +   Y      ++++VP  +   I AK+ PK I +++      +RF 
Sbjct: 288 APMAGIINRLNFRTPGGYVNTGDVVLELVPTGEALVIEAKIAPKDISNIRPEDAVRIRFS 347

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y   +       + +I P       N     Y   +     L      +    G  A V
Sbjct: 348 AYDSAKYGTVDGRVLRISPDAIVDQQNQGLSHYLIDVAIEGKLNVDGEPVTFMPGMTATV 407

Query: 414 LFTAKNTTLAQEIIHPI 430
              +   T+ + I  P+
Sbjct: 408 DVLSGKRTVLEYIWQPV 424


>gi|16033549|gb|AAL13283.1|AF414141_4 LktD [Mannheimia haemolytica]
 gi|15987893|gb|AAL12768.1| LktD [Mannheimia haemolytica]
 gi|15987901|gb|AAL12774.1| LktD [Mannheimia haemolytica]
 gi|15987905|gb|AAL12777.1| LktD [Mannheimia haemolytica]
 gi|15987909|gb|AAL12780.1| LktD [Mannheimia haemolytica]
 gi|15987913|gb|AAL12783.1| LktD [Mannheimia haemolytica]
 gi|15987921|gb|AAL12789.1| LktD [Mannheimia haemolytica]
 gi|15987925|gb|AAL12792.1| LktD [Mannheimia haemolytica]
 gi|15987929|gb|AAL12795.1| LktD [Mannheimia haemolytica]
          Length = 472

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 60/421 (14%), Positives = 152/421 (36%), Gaps = 9/421 (2%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ ++  I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +      ++ L  +  +        +    +
Sbjct: 118 VEKGQLLVSLTALGSDADIKKTMASLSLAKLENYRYQTLLTAIEKESL---PVIDLSRTE 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D   +       +     ++  +    K    +     +  +              Q+
Sbjct: 175 FKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTIFAYVRKYEGATRIEQE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   K L+++ ++S+++L  QE  + ++  EL     +   +   +  + +E  L    
Sbjct: 235 KLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNELENDLLNVKEELELITQF 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  ++   L+Q+         +L    + R+   I +P++GT+   +  +       ++ 
Sbjct: 295 FKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVSGTVQQLKIHTIGGVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP   +    A V  K I  V  G    ++   +   R       I+ I P   +Q
Sbjct: 355 LMIIVPEDDVLEATALVPNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHISPDAIEQ 414

Query: 378 DNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            N       +   + I     +      I+L +G            ++   ++ P+ ++ 
Sbjct: 415 PNVGLV---FNATIAIDRKNLTSPDGRKIDLSSGMTITAEIKTGERSVMSYLLSPLEESV 471

Query: 435 P 435
            
Sbjct: 472 T 472


>gi|134291486|ref|YP_001115255.1| HlyD family type I secretion membrane fusion protein [Burkholderia
           vietnamiensis G4]
 gi|134134675|gb|ABO59000.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           vietnamiensis G4]
          Length = 472

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 63/397 (15%), Positives = 138/397 (34%), Gaps = 11/397 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             ++I   + G+++ +  V  I+   +G++++  V +G ++  G  L+  +  +     D
Sbjct: 78  GKLDIVAVAPGKLIPKQQVKTIQPALTGVVRRILVRDGQRVQAGDLLMELDTTQAAADAD 137

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S   L   +  E+S            + A  S     +D         ++    GI
Sbjct: 138 KARQS--RLDAALMAERSRALLQA------QSAGASPTLTKIDDASDAQQLEAQHLADGI 189

Query: 158 SSVYRS-LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
              YR  L      +            + + L A     ++      +L     V++ D 
Sbjct: 190 YFEYRDKLHSAQAELLKRDAELGTTRQQIAKLEATAPLARRQANDYASLVADKYVARTDY 249

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             +E+       EL       + +   I +   E     + Y ++    L++  +  A  
Sbjct: 250 LDKEQTALNQEHELAAQRSHAQELAAAIVQQRAEVAALTSEYRRQQLDALDKANQQLAQS 309

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            +  T  +  ++  ++ +P+AGT+   +  +    A  + P+M+IVP   +  + A +  
Sbjct: 310 RNDETKADTRQKLLSLTAPVAGTVQQLKIHTLGGVATAASPVMEIVP-DDMLEVEADIEN 368

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           K I  VK G  A V+   +   R       ++ +         +  T     + L    +
Sbjct: 369 KDIGFVKVGQPAVVKIEAFPYTRYGFLHGTVQTVSNDAVPDRKSGLTFPV-RIRLATNRI 427

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
             +D  I L  G            ++A   + P+   
Sbjct: 428 RANDTWINLTPGMSVSAEIKTGKRSVAHYFLDPVIQT 464


>gi|15987917|gb|AAL12786.1| LktD [Mannheimia haemolytica]
          Length = 472

 Score =  242 bits (617), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 62/421 (14%), Positives = 153/421 (36%), Gaps = 9/421 (2%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +I  I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLIAYLIMLFLIVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +      ++ L  +  +        +    +
Sbjct: 118 VEKGQLLVSLTALGSDADIKKTMASLSLAKLENYRYQTLLTAIEKESL---PVIDLSRTE 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D   +       +     ++  +    K    +     +  +              Q+
Sbjct: 175 FKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTIFAYVRKYEGATRIEQE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   K L+++ ++S+++L  QE  + ++  EL     +   +   +  + +E  L    
Sbjct: 235 KLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNELENDLLNVKEELELITQF 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  ++   L+Q+         +L    + R+   I +P++GT+   +  +       ++ 
Sbjct: 295 FKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVSGTVQQLKIHTIGGVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP   +    A V  K I  V  G    ++   +   R       I+ I P   +Q
Sbjct: 355 LMIIVPEDDVLEATALVQNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHISPDAIEQ 414

Query: 378 DNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            N       +   + I     +     NI+L +G            ++   ++ P+ ++ 
Sbjct: 415 PNVGLV---FNATIAIDRKNLTSPDGRNIDLSSGMTITAEIKTGERSVMSYLLSPLEESV 471

Query: 435 P 435
            
Sbjct: 472 T 472


>gi|319795790|ref|YP_004157430.1| type I secretion membrane fusion protein, hlyd family [Variovorax
           paradoxus EPS]
 gi|315598253|gb|ADU39319.1| type I secretion membrane fusion protein, HlyD family [Variovorax
           paradoxus EPS]
          Length = 438

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 69/446 (15%), Positives = 152/446 (34%), Gaps = 25/446 (5%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLL----SIIGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           +     K   +  P   +R  ++    +++ ++GL       P+E  V + G ++  D V
Sbjct: 9   LQDEETKRAAQTSPKGRRRQWIIGGAVAVLALVGLG-----FPMETVVVAPGRVIPSDRV 63

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTE 113
             I+    GI+    V+ G  + QG  L+  +   +    + +  +  + +  R  +  E
Sbjct: 64  KSIQHLEGGIVSAVLVKEGESVKQGQSLVEIDLGGSGLNFEELTARYAATQATRVRLMAE 123

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                              SR+    D            +          +   ++ +  
Sbjct: 124 SRGQPL-------------SRQSFATDIDESVFEGELGAYQARSLEQRGVMAGAVSGLEQ 170

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               +L+ + K   L   L   QK+L + + LF +  V Q ++ ++ R       EL   
Sbjct: 171 ARSKQLEQQAKVKGLSDRLELMQKELEISEQLFSEKLVGQVEVLEKRRQAEGVRSELAVA 230

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                +    I E   +       + +  S +L   +R FA     L      R +  + 
Sbjct: 231 RQGVISANAAITESQAKMAEAEGRFRRRASDELATVERQFASLSEDLARARTQRSRTVVK 290

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +   ++ S     +  + ++++VP      + A++ P     V+ G +A V+  
Sbjct: 291 APSDGIVKGLRNSSPGWVVKPGESILEVVPDKDEIMVEARLNPNDRGFVEIGQSARVKIT 350

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y  +R    +  +  +     +     Q   YY +++ ++          +  G  +EV
Sbjct: 351 AYDYLRYGAVEGKVMLVAADADRDAAIAQGAPYYRLLISMSQSHVGRVENRITAGMESEV 410

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIFE 439
                       I+ P+     + F 
Sbjct: 411 DLRVGTDPFIWYILRPVLKLRREAFR 436


>gi|238762644|ref|ZP_04623614.1| Hemolysin transport protein [Yersinia kristensenii ATCC 33638]
 gi|238699289|gb|EEP92036.1| Hemolysin transport protein [Yersinia kristensenii ATCC 33638]
          Length = 457

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 59/422 (13%), Positives = 144/422 (34%), Gaps = 11/422 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R      + ++ ++ WSI   ++I  S++G+++  ++   I+S   G++ 
Sbjct: 36  VERPVAPLARRTAWFLALTLLLVLLWSIFGKLDIHASANGKVIVSEHSKVIQSFEPGVVV 95

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +G ++  G  L+    I     +      + +    ++  + +    ++ +    
Sbjct: 96  AINVRDGDRVAAGQVLIELNPIGIDAEVSNINQQLMHR--SLEAARMSALLTHDPHTHFL 153

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               S E  ++        T   +      +V   L  + +                +  
Sbjct: 154 SPPNSPESLVM--------TAKALLAKEYDAVNAELARQDSEQAVNQAYIQTGGTNIAHQ 205

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +AL+ +  + L  ++ L +  ++++ ++  QER    +  E      EQ  +    + L 
Sbjct: 206 KALMKNIYQRLQALRTLVKSKSIAEVEVLIQEREWLNANAEAGRLQSEQVVLQAKKHHLM 265

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A   +     L +          +   L + + Q+T+ +P+AG I  +   + 
Sbjct: 266 QTRLHYLAEKKRSYQEQLNKAHEVLNQLQQERVKLMEKQRQQTLRAPVAGVIQQSTVHTL 325

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP +    +   +  K +  V  G    V+   +   R       ++
Sbjct: 326 GGVVTSAQPLMVLVPENYQLELDVMILNKDVGFVLPGQAVEVKIDSFPYTRFGTLSGEVK 385

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I     +            + L    L      + L  G    V        +   ++ 
Sbjct: 386 HISRDAMEDQQQGLVFP-ARIRLNSDTLTVEGKPVRLSAGMAVSVEIKTGRRRVIDYLLS 444

Query: 429 PI 430
           P+
Sbjct: 445 PL 446


>gi|258625056|ref|ZP_05719976.1| Leukotoxin secretion protein D [Vibrio mimicus VM603]
 gi|258582652|gb|EEW07481.1| Leukotoxin secretion protein D [Vibrio mimicus VM603]
          Length = 454

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 63/435 (14%), Positives = 151/435 (34%), Gaps = 12/435 (2%)

Query: 4   FMWKNLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             +  +    P+     + LSI I ++  I W+I+  ++I  S++G+++       I+  
Sbjct: 27  PAYLEIIERPPSPYATTSALSIAILMVAAIVWAIVGKLDIHASATGQVIVSSRSKVIEPF 86

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G + +  V+ G ++ +G  L++   +            +   R  I   +        
Sbjct: 87  VQGEVAEILVKEGERVNEGETLISLNPVGALAERTRILQKLDYTRLEISRYQ-------- 138

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             ++L          +     + +           + +   L      +     ++  + 
Sbjct: 139 --NLLSGEIAETLHVIQIGTPQMYEASFAALKADWNEIQAQLASIEAEINVNQTSQQAIS 196

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +  +L+A+LS+ ++ L   K L + N++++ ++   E+ +  +     +     +    
Sbjct: 197 REIIVLKAVLSNVEERLLARKKLAQTNSIARMEVLDLEKELLDTQRARHQLESHLEIKRS 256

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
             ++L D      A   KE    L+Q     A+   +L    +   Q  I SP+ GT+  
Sbjct: 257 EEHQLIDGRETYRAGVQKEQRNQLKQLLAQNAELEQELIKANEVLRQMVIKSPVNGTVQQ 316

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +     Q ++ LM IVPH  L  +   +  K +  V       ++   +   +   
Sbjct: 317 LKVNTLGGVVQPAEELMTIVPHDALLEVEVHLLNKDVGFVFTDQYVEIKVDTFPYTKYGT 376

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
               I  +     +  N         + L    +     +I L+ G          N  +
Sbjct: 377 LSGQIIHVSRDAIKDQNLGMVFP-ARIALDTDLITIDGEHIPLQPGMSVVAEIKTGNRKI 435

Query: 423 AQEIIHPITDNWPKI 437
            + ++ P+     + 
Sbjct: 436 IEYLLTPLQQYQSEA 450


>gi|15987933|gb|AAL12798.1| LktD [Mannheimia glucosida]
 gi|15987937|gb|AAL12801.1| LktD [Mannheimia glucosida]
          Length = 472

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 70/429 (16%), Positives = 160/429 (37%), Gaps = 25/429 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ ++  I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +             N +Y  L  A E+    
Sbjct: 118 VEKGQLLVSLTALGSEADIKKTIASLSLEKLE-----------NYRYQTLLTAIENESLP 166

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKSSL-----LR 189
           ++D      +  S+     I  +         K    +++   R D E +++        
Sbjct: 167 VIDLSKTEFNDSSEEDRLRIKHLIEEQYTTWQKQKMQKTLAYKRKDAEKQTTSAYVRKYE 226

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                 Q+ L   K L+++ ++S+++L  QE    ++  EL     +   +   +  + +
Sbjct: 227 GATRIEQEKLKDFKALYQQKSLSKHELLSQENKAIEAQNELAVYRSKLNELENDLLNVKE 286

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E  L    +  ++   L+Q+         +L    + R+   I +P++GT+   +  +  
Sbjct: 287 ELELITQFFKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVSGTVQQLKIHTIG 346

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                ++ LM IVP   +    A V  K I  V  G    ++   +   R       I+ 
Sbjct: 347 GVVTTAETLMIIVPEDDVLEATALVQNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKH 406

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEI 426
           I P   +Q N       +   + I     +     NI+L +G            ++   +
Sbjct: 407 ISPDAIEQPNVGLV---FNATIAIDRKNLTSPDGRNIDLSSGMTITAEIKTGERSVMSYL 463

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 464 LSPLEESVT 472


>gi|254502278|ref|ZP_05114429.1| type I secretion membrane fusion protein, HlyD family [Labrenzia
           alexandrii DFL-11]
 gi|222438349|gb|EEE45028.1| type I secretion membrane fusion protein, HlyD family [Labrenzia
           alexandrii DFL-11]
          Length = 446

 Score =  241 bits (616), Expect = 1e-61,   Method: Composition-based stats.
 Identities = 66/427 (15%), Positives = 152/427 (35%), Gaps = 15/427 (3%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           PA   R+ +   I  + L+ W+ +  I    ++ GEI     ++ ++    GI+ +  VE
Sbjct: 30  PAFYTRLLIGLTIATLALLVWAAIGQIREVANTIGEITPAGQILAVEHLEGGIVSEVLVE 89

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  ++ G P+   E  +TT  +   +  +  L   ++ E+      N+   V       
Sbjct: 90  EGQLVMAGDPIARLEKEDTTSELGRIQSRLSYL--ELEEERLIAQEYNDPNTVG------ 141

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
              +L   +    +           +V         R+         LE +  L ++ + 
Sbjct: 142 --LRLDPTVNGLSAQQRAALTANRRAVADEQDAYTARVGQKRAEVASLEVQVELQKSQVE 199

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             ++   + + L +    S+    + +    +S + L + +         + E     N 
Sbjct: 200 LEKEKFQIQETLLKDGYTSRRRYLESKGEYQRSQVTLEQLVGNLAQAREMLTEAQASLNQ 259

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A   ++++ +  +  +  A+   +++ L+  +++  + +P+ G I             
Sbjct: 260 AGAEVNRDVADERARIAQERAELAQEISKLKDRQDRLFVRAPVNGYIKTLGQTGRGAVVN 319

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               + +IVP S+      KV P+ I H+  G  A +    Y         A +E I   
Sbjct: 320 PGDMIAEIVPQSESMVAEVKVNPRDIGHINVGDKAEITITSYDPNIYGTIVAEVETISAS 379

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             Q +     + Y++  L          N+   +R G          + ++   +++P+T
Sbjct: 380 SFQDE---YGEYYFKADLGFPGNTIGTGNVTSPVRPGMQVNAQVVTGSKSVLAYLLNPVT 436

Query: 432 DNWPKIF 438
                +F
Sbjct: 437 RAMRTVF 443


>gi|15987945|gb|AAL12807.1| LktD [Mannheimia glucosida]
 gi|15987952|gb|AAL12812.1| LktD [Mannheimia glucosida]
          Length = 472

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 70/429 (16%), Positives = 160/429 (37%), Gaps = 25/429 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ ++  I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +             N +Y  L  A E+    
Sbjct: 118 VEKGQLLVSLTALGSEADIKKTIASLSLEKLE-----------NYRYQTLLTAIENESLP 166

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKSSL-----LR 189
           ++D      +  S+     I  +         K    +++   R D E +++        
Sbjct: 167 VIDLSKTEFNDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKDAEKQTTSAYVRKYE 226

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                 Q+ L   K L+++ ++S+++L  QE    ++  EL     +   +   +  + +
Sbjct: 227 GATRIEQEKLKDFKALYQQKSLSKHELLSQENKAIEAQNELAVYRSKLNELENDLLNVKE 286

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E  L    +  ++   L+Q+         +L    + R+   I +P++GT+   +  +  
Sbjct: 287 ELELITQFFKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVSGTVQQLKIHTIG 346

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                ++ LM IVP   +    A V  K I  V  G    ++   +   R       I+ 
Sbjct: 347 GVVTTAETLMIIVPEDDVLEATALVQNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKH 406

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEI 426
           I P   +Q N       +   + I     +     NI+L +G            ++   +
Sbjct: 407 ISPDAIEQPNVGLV---FNATIAIDRKNLTSPDGRNIDLSSGMTITAEIKTGERSVMSYL 463

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 464 LSPLEESVT 472


>gi|194334993|ref|YP_002016853.1| secretion protein HlyD family protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194312811|gb|ACF47206.1| secretion protein HlyD family protein [Prosthecochloris aestuarii
           DSM 271]
          Length = 392

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 60/428 (14%), Positives = 127/428 (29%), Gaps = 72/428 (16%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S++   ++ + G    + W+ L P++  V  +G +        ++    GI+    V  G
Sbjct: 31  SMRIGIMVLLAGFGAFLLWAALAPLDEGVPCTGAVSISTRSKVVQHLKGGIVHSVNVREG 90

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +   L+T  D              + +  H    ++A   L           E R 
Sbjct: 91  QMVGKDDLLMTLSD-------QETLARYREVYQHYLGLRAAESRL---------LAEERG 134

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
              + F      +        + +  R L     +                     + S 
Sbjct: 135 ASSITFHPDLLRSPDTALAAEMMATQRELFTARQQA--------------------MRSV 174

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            + L  ++ +  +    +    + E                                   
Sbjct: 175 CERLKGVRAMVSEGYAPRYQQLELEG--------------------------------HL 202

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A    + + ++   Q        K   L    E+  I SP +G +V  Q  +        
Sbjct: 203 AELQSQRASEMAAVQVAVDAWQEKTAALHDELERTGIRSPASGQVVGLQVQTVGAVISPG 262

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + +M IVP  +   +  +V P  I  V  G  A +RF  +A         ++E +   + 
Sbjct: 263 EKIMDIVPLDEKLLVEVRVAPHLIDRVHSGLPADMRFASFAHSPMLMVGGVVESVSHDLI 322

Query: 376 QQ---DNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
                +  +    YY   + +T    +   + +L+ G P + +      TL   ++HP+ 
Sbjct: 323 TDPKMNPVMPGATYYLARVALTPEGIASLGSRKLQAGMPVQTVIRTGERTLLTYLLHPLV 382

Query: 432 DNWPKIFE 439
                  +
Sbjct: 383 KRITASLK 390


>gi|149914140|ref|ZP_01902671.1| HlyD family secretion protein [Roseobacter sp. AzwK-3b]
 gi|149811659|gb|EDM71492.1| HlyD family secretion protein [Roseobacter sp. AzwK-3b]
          Length = 436

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 61/439 (13%), Positives = 153/439 (34%), Gaps = 13/439 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             +   ++   P     + L  ++ ++ +  W+    I+    + G I+   +V  I++ 
Sbjct: 8   ERLAAEMRGRSPLRGSILLLTILVFLVAIFIWAARTEIDNITRALGRIVPSASVQVIEAT 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++    V  G+ +  G  L+  +       +D ++     L   I+  ++ ++    
Sbjct: 68  EPGVLNALHVREGTVVAAGDLLMELDGTLLDSQLDQEQQRAYGLMARIERLQAEINAEPL 127

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           ++           +QL+        + + +     + +   + +   + +       +  
Sbjct: 128 RFS----------DQLVARALDVVQSETALHRGRQAELQAEIDILERQRQQRQQEYEEGL 177

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
             +   +A L+   ++  MM  L E+       L    R   +       +      +  
Sbjct: 178 ADNQTAQATLAVLSEEREMMAPLVERGMEPATTLLTLRRSEAEWQGRATRSQASLARLQG 237

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++E+ D    +   +      DL       A     L  L+   ++  I++P+ G +  
Sbjct: 238 ALDEIDDRIRAQQERFRATALSDLALATAELAALRPALPALQSRADRSRIVAPVRGIVNR 297

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +  + A+Q + L++IVP      + A V P  I  +  G    V+   Y   R   
Sbjct: 298 IHRSTLGSMARQGEELIEIVPLDDTLLVEAHVRPDDIAFLYPGQPVKVQITAYDASRYGS 357

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNT 420
               I +I      +    + +E++ V ++ T      +   +E+  G  A+        
Sbjct: 358 LDGEILRIGADAVTRSE-REEEEFFMVEIRTTGTILDADGVAVEIMPGMVAQANILTGRK 416

Query: 421 TLAQEIIHPITDNWPKIFE 439
           T+ + ++ P+     + F 
Sbjct: 417 TVLEYLLQPVVRVRDRAFR 435


>gi|294665798|ref|ZP_06731069.1| hemolysin secretion protein D [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604450|gb|EFF47830.1| hemolysin secretion protein D [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 473

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 51/424 (12%), Positives = 139/424 (32%), Gaps = 9/424 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L     +   R T+  IIG   + + W+ L  ++I   + G+ + +     +++  + +
Sbjct: 47  ELTETPVSPTARWTMRIIIGFFCVALLWACLGKLDIVAVAPGKTVVDSRTKVVQTAETAV 106

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  V +G  + +G  L+  +   T         ++ N R     + +    +      
Sbjct: 107 VRRILVRDGQAVKKGQLLVELDATATGAEFAQAGDALVNARLAALRQAALATAIATGLPP 166

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                     + +    +  S+    F     ++  S+  +   +++       L   + 
Sbjct: 167 QLDPAPDLPAERVANEQQLVSSQFDAFQARRHNLQASIAQRQAELQTTQDAIEPLAESAR 226

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           + +     + +       L E   V ++D   +E+    +  +L    +  + +   I+ 
Sbjct: 227 ISKVRAEDYGR-------LVEGKYVGRHDYLLREQERIAAESQLATQRNRLQEIRSAISA 279

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             +E  +   +  ++    L Q           +    +      + +P+ GT+      
Sbjct: 280 AQEELRVLVTDTRQQALDALRQASEQAGQLTQDVAKTGQRDRLMALHAPVDGTVQQLAVH 339

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +QPL+ +VP  +   +   V  K I  ++ G   TV+   +   R       
Sbjct: 340 TVGGVVTPAQPLLVVVPAEEALEVEVTVLNKDIGFMRPGQPVTVKVDSFPYTRYGYLTGT 399

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  +    +Q +          + L  + L      + +  G             +   +
Sbjct: 400 VASVSHDAAQDEKLGLVFP-ARIKLNGSTLEIDGVKVRMSAGMSLSAEVKTGKRRVIDYL 458

Query: 427 IHPI 430
           + P+
Sbjct: 459 LSPL 462


>gi|126362|sp|P16534|HLYD_PASHA RecName: Full=Leukotoxin secretion protein D
 gi|150496|gb|AAA25531.1| LktD protein [Mannheimia haemolytica]
          Length = 478

 Score =  241 bits (615), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 59/421 (14%), Positives = 151/421 (35%), Gaps = 9/421 (2%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ ++  I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +      ++ L  +  +        +    +
Sbjct: 118 VEKGQLLVSLTALGSDADIKKTMASLSLAKLENYRYQTLLTAIEKESL---PVIDLSRTE 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D   +       +     ++  +    K    +     +  +              Q+
Sbjct: 175 FKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTIFAYVRKYEGATRIEQE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                K L+++ ++S+++L  QE  + ++  EL     +   +   +  + +E  L    
Sbjct: 235 KFKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNELENDLLNVKEELELITQF 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  ++   L+Q+         +L    + R+   I +P++GT+   +  +       ++ 
Sbjct: 295 FKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVSGTVQQLKIHTIGGVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP   +    A V  K I  V  G    ++   +   R       I+ I P   +Q
Sbjct: 355 LMIIVPEDDVLEATALVPNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHISPDAIEQ 414

Query: 378 DNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            N       +   + I     +      I+L +G            ++   ++ P+ ++ 
Sbjct: 415 PNVGLV---FNATIAIDRKNLTSPDGRKIDLSSGMTITAEIKTGERSVMSYLLSPLEESV 471

Query: 435 P 435
            
Sbjct: 472 T 472


>gi|254240270|ref|ZP_04933592.1| hypothetical protein PA2G_00914 [Pseudomonas aeruginosa 2192]
 gi|126193648|gb|EAZ57711.1| hypothetical protein PA2G_00914 [Pseudomonas aeruginosa 2192]
          Length = 337

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 61/386 (15%), Positives = 129/386 (33%), Gaps = 60/386 (15%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC- 108
           ++    + +I+S   GI+ +  V+ G  +    PL+  ++                LR  
Sbjct: 1   VVPFSRIQKIQSLEGGILDRLLVKEGDLVEVDQPLVRLDETRFLTNFQESANQASVLRAA 60

Query: 109 --HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              +D E      +    DV  +   +R E       +   +       G  ++ R +  
Sbjct: 61  IARLDAEVLGKKSIEFPPDVDPEGPLARSE------RELFKSRRDKLVEGTQAIQRQIH- 113

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                                        Q  L +++ L  K AVSQ +           
Sbjct: 114 ---------------------------LAQSQLDLVRPLVAKRAVSQME----------- 135

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            L+L ++I      L  +             Y ++   +  Q +   +     +   +  
Sbjct: 136 ALKLSQDIATLSGKLTELKST----------YFQDAYTERAQRKADLSALEPIVQQRQDQ 185

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  ILSP+ G +      +     Q  +P+M+++P  +   + AK+ P+ +  +  G 
Sbjct: 186 LRRTEILSPVRGRVNTVLINTRGGVIQPGEPIMEVIPVEERLLVEAKIKPRDVAFLVPGM 245

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IE 404
            A V+   Y        K  +E+I     ++D     + YY+V++K            + 
Sbjct: 246 PAKVKITAYDYTIYGDLKGTLEQISADTIEEDTPHGKESYYQVLIKTDGSQLKRGEEVLP 305

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPI 430
           +  G  AEV   +   ++   ++ P+
Sbjct: 306 IIPGMVAEVDILSGKRSVLNYLLRPL 331


>gi|240142879|ref|YP_002967392.1| putative HlyD family secretion protein [Methylobacterium extorquens
           AM1]
 gi|240012826|gb|ACS44051.1| putative HlyD family secretion protein [Methylobacterium extorquens
           AM1]
          Length = 431

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 54/431 (12%), Positives = 132/431 (30%), Gaps = 5/431 (1%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            +L+              +  +  L  WS + P+  +  ++G +  +     ++    GI
Sbjct: 2   SDLQSKLRGPRTLAIAAGLGSMTLLGAWSAMAPLASATVAAGIVSPDTGRQTVQHLEGGI 61

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V  G  +  G P+    D       D +      L       ++  D     +  
Sbjct: 62  LDRMLVAEGDAVAAGQPIAVLLDARAKAAYDNQIHRRSELAAARIRLRALADGAEPDFRP 121

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L+             L        ++     + +   +     ++R        L  +  
Sbjct: 122 LDADLVRDPS-----LRAVVENEGEILRTRRAGLRAKVDGLAEQIRRSEATGAALRRQVD 176

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                  +  K L   ++L  K   ++  +   E  + +   +      + +        
Sbjct: 177 ATEVERVTVLKQLEDARHLLAKGLTTRPRVLALEARMAQLDAQQASLDGQIQAAASDAGR 236

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                  E + + ++I  +  + +   A   +++        ++ + +P AGT+V  +  
Sbjct: 237 TRTVLAGEESAFRQQIGEETAKVEAEAAVVANQIAASADAAGRQQVRAPEAGTVVSLKVR 296

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +          +  I+P      +  +V P  I HV  G +A +    ++          
Sbjct: 297 TPGAVVAPGGAVADILPSDASLVLEVRVRPVDIAHVSVGQSARISVTAFSAKEVPVLPGH 356

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           + K+     Q     +     E+ +   +LA      +L  G P +     +  TL   +
Sbjct: 357 VRKVGADAVQDPATREFHYKAEIAIDRGELARLAPGSKLVAGMPVQAFIEDRPRTLLTWL 416

Query: 427 IHPITDNWPKI 437
             P+   + K 
Sbjct: 417 AEPMMRGFAKA 427


>gi|254360697|ref|ZP_04976846.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Mannheimia haemolytica PHL213]
 gi|261491840|ref|ZP_05988419.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261494689|ref|ZP_05991169.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|153091237|gb|EDN73242.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Mannheimia haemolytica PHL213]
 gi|261309654|gb|EEY10877.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261312495|gb|EEY13619.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 478

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 60/421 (14%), Positives = 152/421 (36%), Gaps = 9/421 (2%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ ++  I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +      ++ L  +  +        +    +
Sbjct: 118 VEKGQLLVSLTALGSDADIKKTMASLSLAKLENYRYQTLLTAIEKESL---PVIDLSRTE 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D   +       +     ++  +    K    +     +  +              Q+
Sbjct: 175 FKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTIFAYVRKYEGATRIEQE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   K L+++ ++S+++L  QE  + ++  EL     +   +   +  + +E  L    
Sbjct: 235 KLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNELENDLLNVKEELELITQF 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  ++   L+Q+         +L    + R+   I +P++GT+   +  +       ++ 
Sbjct: 295 FKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVSGTVQQLKIHTIGGVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP   +    A V  K I  V  G    ++   +   R       I+ I P   +Q
Sbjct: 355 LMIIVPEDDVLEATALVPNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHISPDAIEQ 414

Query: 378 DNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            N       +   + I     +      I+L +G            ++   ++ P+ ++ 
Sbjct: 415 PNVGLV---FNATIAIDRKNLTSPDGRKIDLSSGMTITAEIKTGERSVMSYLLSPLEESV 471

Query: 435 P 435
            
Sbjct: 472 T 472


>gi|119385140|ref|YP_916196.1| HlyD family type I secretion membrane fusion protein [Paracoccus
           denitrificans PD1222]
 gi|119374907|gb|ABL70500.1| type I secretion membrane fusion protein, HlyD family [Paracoccus
           denitrificans PD1222]
          Length = 399

 Score =  241 bits (614), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 64/427 (14%), Positives = 135/427 (31%), Gaps = 63/427 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              KR+ L     +   + W+    ++   + +  ++       I+S   GI+   +V  
Sbjct: 25  TRSKRVVLAFFALLASGLVWAHFAVLDEVSTGTARVVPTMREQVIQSLEGGILTSLEVRP 84

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              +  G  L   +       ++      +         ++ +                 
Sbjct: 85  DEVVEPGQILARLDPTRNEAEVEESASKYRAALATATRLQAEI----------------- 127

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLS 193
                       +    VF   +S         +     +Y  R   LE K  +L   + 
Sbjct: 128 ------------TGQPLVFPEELSDF----PDLIAVETQLYAERKRSLEAKLEMLDQAID 171

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++LT+ + L    A S  D+ + ++      ++  +   +                 
Sbjct: 172 LTGQELTINERLKATGATSNIDVLRLKKQKIDLEMQKSDTAAQ----------------- 214

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               +  +   DL + +   A     +        + T+ SP+ G +   +  +      
Sbjct: 215 ----FHVQAREDLTRAEAEIAALRPIVRSRSDVVTRLTLRSPVRGIVKNIEVSTIGGVVS 270

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            +  LM I+P      I AK+TP+ I  ++ G +ATV+   Y        K  +  I P 
Sbjct: 271 PNGKLMDIIPLDDQLMIEAKITPRDIAFIRPGLSATVKVSAYDYAVYGGLKGEVVTISPD 330

Query: 374 ISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             Q + N + Q YY V+++    A    +     +  G  A V       T+ + +I P 
Sbjct: 331 TIQDEIN-RDQFYYRVLIRAESDALVNDAGQRFPIVPGMMATVDIHTGQKTVLEYLIQP- 388

Query: 431 TDNWPKI 437
              + + 
Sbjct: 389 ---FNRA 392


>gi|238897511|ref|YP_002923190.1| putative ABC associated RTX toxin transporter, HlyD/MFP family
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229465268|gb|ACQ67042.1| putative ABC associated RTX toxin transporter, HlyD/MFP family
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 458

 Score =  241 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 70/431 (16%), Positives = 154/431 (35%), Gaps = 16/431 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R   L +  ++ ++ WSI+  ++I  ++ G+++  D    I+S   G + 
Sbjct: 38  IERPAAPWARRTAWLILGFLLLVLLWSIIGKLDIHATALGKVIVSDRTKVIQSLDPGTVI 97

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +G ++  G  LL    +     ID + + +     H   EK+ L  L     +  
Sbjct: 98  AINVRDGQKVKAGQVLLELNPVG----IDTEVLKVSEQLAHRSLEKARLTALLTSAPLSH 153

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            +  +  E+L++           +       V   L+ +  ++     N   ++ + S  
Sbjct: 154 FSPPADTEELIE-------ASRALLQREFDEVNAELERQDMKIAVNQTNDESVQEQISNQ 206

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           + L+ + ++ L  ++ L +  ++++ DL ++E+        L E   +QK +L       
Sbjct: 207 KTLIQNIEQRLKALRTLAKTQSIAKIDLLEKEKEWLNGKALLSEMQGKQKILLSEKQSYL 266

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E     A   ++    L + Q   +    +   L   +  + +  PI G +      + 
Sbjct: 267 QEKQRYMAEKKRDYRERLNKVQENISQLKQEKIKLMDRQRLQMLRLPIDGVVQELSVHTL 326

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +Q LM IVP      I A V  K +  V  G T  V+   +   R    K  ++
Sbjct: 327 EGVVSSAQKLMSIVPEDTHLEIEAMVLNKDVGFVLPGQTVEVKVDSFPYTRYGTLKGEVK 386

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEI 426
            +     +              +K+ D     +   + L  G             +   +
Sbjct: 387 HVSLDAVEDQKQGLIFP---TRIKLMDDTLKVDGQLVRLSAGMSVNAEIKTGKRRVIDYL 443

Query: 427 IHPITDNWPKI 437
           + P+     + 
Sbjct: 444 LSPLQQYQSEA 454


>gi|144897238|emb|CAM74102.1| Type I secretion membrane fusion protein, HlyD [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 419

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 59/417 (14%), Positives = 145/417 (34%), Gaps = 13/417 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M    +   +GL   + +L ++  V++   I     V  ++    G I++  V  G+ + 
Sbjct: 1   MLGWCVTAFVGLTAAAAVLELDEVVTAPARIEPSGQVRRVQHFEGGTIQEVLVREGAFVA 60

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L+   + +    +  ++             K+ L            A +      +
Sbjct: 61  EGEVLVRLVNSQGAQDLADRRARWSAFHARAARLKADL----------SGAKDIVWPAGV 110

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D         + +    ++   + + +    M       ++ E + + L    S   +++
Sbjct: 111 DIDADTKRRETSIHGERLAHRAQQVTVIQREMERRRREVVETETRHAGLARAQSKGAEEM 170

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + +  +E   V   ++ + ER       E+         +   + E   + N     + 
Sbjct: 171 HIKRKAYEVGVVGNQEIVKLEREQLMLDTEVSTARDTISRLQAQLAEADAKLNEFEKGWR 230

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E+  ++ + +   A   + + +      +  + SP+ G +      S    A+    LM
Sbjct: 231 TEVLEEISKAEAEIAALKATMEVATDRESRSEVRSPVRGVVKMAAITSVGQVAKPGDTLM 290

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IVP      + AKV P+ I H+++G  A +R   Y   R  +    +  +     ++  
Sbjct: 291 DIVPLDDALVVEAKVPPQDIGHLREGLAARIRLSAYDPFRYGQLPGRVLAVGADSIEETQ 350

Query: 380 NLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
                 YY+V+++      +D   +   +R+G            ++ + +  P+  N
Sbjct: 351 GNTVNTYYKVVIQSDQAVLTDGKGQVHAVRSGMAGTASIIIGRKSILRMVFDPLLRN 407


>gi|238025601|ref|YP_002909833.1| Type I secretion membrane fusion protein, HlyD family protein
           [Burkholderia glumae BGR1]
 gi|237880266|gb|ACR32597.1| Type I secretion membrane fusion protein, HlyD family protein
           [Burkholderia glumae BGR1]
          Length = 472

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 62/420 (14%), Positives = 149/420 (35%), Gaps = 10/420 (2%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           HPA      ++ ++ +I ++  +    ++I  +++G+++ +  V  I+   +G++++  V
Sbjct: 54  HPAPRWAARVIILLVVIAVLI-ACFAKLDIVATATGKLVPDARVKVIQPAITGVVREIAV 112

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            +G ++  G  L+  +  +     +  + S  +        ++ L       D L++   
Sbjct: 113 RDGQRVRAGDLLVKLDTTQAAADEENARSSRFDAAFAAARSQALL-------DALQEGHA 165

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            R   +        +    + +         L      +            + + L A  
Sbjct: 166 PRVSTIAGASADRQAEAQHLVDGMYREYEDKLGSARAELAKREAELDSTRQEIAKLAATA 225

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              +      K+L     V+Q+D   +E+       EL       + +   I E   +  
Sbjct: 226 PLARTQANDYKSLAVDKYVAQSDYLDKEQAALNQEHELAAQRSHARELAAGIVEQQSDIA 285

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              + + +E   DLE+         +  T     +E  ++ +P++GT+    + +     
Sbjct: 286 QTISQFRRERLDDLEKATEQLTQSSNDETKAHTRKELLSLTAPVSGTVQQLATHTLGGVV 345

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             +Q LM+IVP      + A +  K +  +K G  A V+   +   R       +  +  
Sbjct: 346 TTAQSLMEIVP-DDAVEVEATIENKDVGFLKIGQHAAVKLDAFPYTRYGILDGTVVDLSN 404

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
              Q    L       + L+   +   +  I L  G   +        ++AQ ++ P+ +
Sbjct: 405 DAVQD-RKLGLAFRVRIRLQSNRMWIDNRWISLTPGMTVKAEIKTGKQSVAQYLLGPLVE 463


>gi|15987941|gb|AAL12804.1| LktD [Mannheimia glucosida]
          Length = 472

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 62/421 (14%), Positives = 153/421 (36%), Gaps = 9/421 (2%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ ++  I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +      ++ L  +  +        +  + +
Sbjct: 118 VEKGQLLVSLTALGSEADIKKTIASLSLEKLENYRYQTLLTAIEKESL---PVIDLSKTE 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D   +       +     ++  +    K    +  Y  +                 Q+
Sbjct: 175 FNDSSEEDRLRIKHLIEEQYTTWQKQKMQKTLAYKRKYAEKQTTSAYVRKYEGATRIEQE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   K L+++ ++S+++L  QE    ++  EL     +   +   +  + +E  L    
Sbjct: 235 KLKDFKALYQQKSLSKHELLSQENKAIEAQNELAVYRSKLNELENDLLNVKEELELITQF 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  ++   L+Q+         +L    + R+   I +P++GT+   +  +       ++ 
Sbjct: 295 FKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVSGTVQQLKIHTIGGVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP   +    A V  K I  V  G    ++   +   R       I+ I P   +Q
Sbjct: 355 LMIIVPEDDVLEATALVQNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHISPDAIEQ 414

Query: 378 DNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            N       +   + I     +     NI+L +G            ++   ++ P+ ++ 
Sbjct: 415 PNVGLV---FNATIAIDRKNLTSPDGRNIDLSSGMTITAEIKTGERSVMSYLLSPLEESV 471

Query: 435 P 435
            
Sbjct: 472 T 472


>gi|238796516|ref|ZP_04640024.1| Hemolysin transport protein [Yersinia mollaretii ATCC 43969]
 gi|238719721|gb|EEQ11529.1| Hemolysin transport protein [Yersinia mollaretii ATCC 43969]
          Length = 461

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 65/429 (15%), Positives = 152/429 (35%), Gaps = 11/429 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R     +I ++ ++ WSI+  ++I  S++G+++  ++   I+   SG++ 
Sbjct: 40  VERPIAPLARRTAWFLVITLLLVLIWSIVGKLDIHASANGKVIVSEHSKVIQPLESGVVA 99

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +G ++  G  L+    I     ++     + + R       + L       D  +
Sbjct: 100 AINVRDGDRVDVGQVLIELNPIGIDAELENINKQLIHRRLEAARMVAMLT------DDPQ 153

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             F +  +   D L    +   K ++   + + R    +      I     ++ N+  L+
Sbjct: 154 THFAAPLDAPDDLLMMTQALLLKEYDEVNAELSRMESEQAVNQAHIQAGIANIANQKVLM 213

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +    +  + L  ++ L +  ++++ +L  QER    +T E      EQ  +      L 
Sbjct: 214 K----NIHQRLQALRTLAKSKSIAEIELLVQEREWLNATAEASRFHSEQAILEAKTLNLT 269

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A   +     L +          +   L + + Q+++ +P+AG I      + 
Sbjct: 270 QTRLHYLAEKKRSYQERLNKAHEVINQLQQEQIKLMEKQRQQSLRAPVAGVIQQLAVHTL 329

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP +    +   V  K +  V  G    V+   +   R       ++
Sbjct: 330 GGVVTAAQPLMVLVPENHQLELDVMVLNKDVGFVLPGQAVEVKVDSFPYTRFGTLAGEVK 389

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +     +            + L    L  +   + L  G    V        +   ++ 
Sbjct: 390 HVSRDAMEDQQLGLVFP-ARIRLHSDTLMVAGKPVRLSAGMAVSVEIKTGQRRVIDYLLS 448

Query: 429 PITDNWPKI 437
           P+ +   + 
Sbjct: 449 PLQEYQSEA 457


>gi|161520261|ref|YP_001583688.1| HlyD family type I secretion membrane fusion protein [Burkholderia
           multivorans ATCC 17616]
 gi|189353562|ref|YP_001949189.1| putative hemolysin-type secretion transmembrane protein
           [Burkholderia multivorans ATCC 17616]
 gi|160344311|gb|ABX17396.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           multivorans ATCC 17616]
 gi|189337584|dbj|BAG46653.1| putative hemolysin-type secretion transmembrane protein
           [Burkholderia multivorans ATCC 17616]
          Length = 390

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 70/446 (15%), Positives = 136/446 (30%), Gaps = 62/446 (13%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M  F W        A  + +  L +  +   + WS+   ++      G++        I+
Sbjct: 1   MSDFTWSRRGAREAAHARPVLWLIVAALSVFLVWSVFAGLDEVAVGEGKVTPASKGQIIQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSAL 117
           S   GI+ +  V  G  +  G  L T + +     ++     I  L+     +  E + L
Sbjct: 61  SLEGGILSELVVREGDVVDAGQTLATLDPVLARSSMEETLERITALQGRAARLHAEMNDL 120

Query: 118 DFLNNKYDVL-EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
             +    ++  EKA   RE QL                                      
Sbjct: 121 PSVAFPAELANEKAVTERERQLF-----------------------------------VA 145

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           NR       + LR  L   + +L +   L +  A ++ ++ +  +   + + +L     E
Sbjct: 146 NRRAFRENVANLREQLRLAEDELRIALPLLKTGATNEVEVLRLRQKAAEFSTKLAATQSE 205

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                                Y   +  D  +        +           +  I SP 
Sbjct: 206 ---------------------YYVALKADYSKTMADLEPLLKVREGRADQLRRTVIRSPA 244

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   +  +     Q    LM+IVP      I A+++P+ I  +  G  ATV+   + 
Sbjct: 245 RGIVKDIRVSTVGGVVQPGGVLMEIVPLDDQLLIEARLSPRDIAFIHPGQEATVKITAFE 304

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVL 414
                   A +E+I P   +   + +   Y   +L               +  G  A   
Sbjct: 305 PSIYGSLPAKVERISPDTIEDQVDRRVYYYRVYVLTQHAYLETRDGKRHPILPGMVATAE 364

Query: 415 FTAKNTTLAQEIIHPITDNWPKIFER 440
                 T+ + ++ P+      + ER
Sbjct: 365 IRTGRRTVFEYLVKPLNRAAEALRER 390


>gi|144899995|emb|CAM76859.1| Type I secretion membrane fusion protein, HlyD [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 426

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 55/406 (13%), Positives = 129/406 (31%), Gaps = 20/406 (4%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  I+I   ++G+++    V   +    GI+ +  V  G ++    PLL  + I +   +
Sbjct: 32  LGRIDIVAHATGKVIPSSQVKNRQHLEGGIVAEILVREGQRVAADQPLLALQSISSDAQV 91

Query: 97  DLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           D   V +  L      +  E +    L     +L            D   +   T + +F
Sbjct: 92  DELGVRLTALALDVARLQAEAAGSGDLELPPALLR-----------DHPAESQRTQA-LF 139

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                +   ++  +   +        ++  +    R  L    + + +  +L   N  ++
Sbjct: 140 RSRRDNYQSAIASQQKAIGQREQAVAEISARLRNTRNSLGLIDEQVRISNDLLRDNLTNR 199

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +     R        + E+    +     I E   + N     + +E+   L    R  
Sbjct: 200 YNHLALLRDQSNLRSRMDEDAIAVRRGELAIEEARSQINGIRHAHEQEVKEQLAAALREH 259

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +   +      ++ +  + SP+ G +      +     Q  + ++ IVP      +  +
Sbjct: 260 DELQQRSRRFSDSQSRTVLRSPVDGFVKTLHVVTQGGVIQPGKTVVDIVPADDRLIVEGR 319

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +   ++ HV  G    +        R       +  I P      ++     YY V ++ 
Sbjct: 320 LPVYEVGHVNVGQPTRISLSSAESTRFGTIGGTVIHISPDTLVSQDSGA---YYRVRVET 376

Query: 394 --TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
                A +    +L  G   ++       ++   ++ P      K 
Sbjct: 377 NADHFASAGQRYQLYPGVQVDISIITGTRSVLDYLLTPFLGYADKA 422


>gi|149910993|ref|ZP_01899623.1| Membrane-fusion protein [Moritella sp. PE36]
 gi|149805976|gb|EDM65961.1| Membrane-fusion protein [Moritella sp. PE36]
          Length = 459

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 73/432 (16%), Positives = 160/432 (37%), Gaps = 16/432 (3%)

Query: 9   LKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L    P+S  R+T +S+ IG++  + W+    ++I+ +++G+++       +++   G +
Sbjct: 37  LSEKPPSSFARITAMSLSIGVLLTLLWACFGELDINATTTGKLIVSSRTQTVQAYEQGRV 96

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-NLRCHIDTEKSALDFLNNKYDV 126
            K  V +G  +  G  L+  + +     + +     +  LR  I       D        
Sbjct: 97  VKVNVRDGQVVKAGDSLIELDTVGLDQEMQMYDAEYQYQLREQIRFRALLTDDPMASV-- 154

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR-SLKMKLTRMRSIYLNRLDLENKS 185
                     Q  D +        ++    I + YR  ++     M     N+  +E   
Sbjct: 155 ----------QFPDNMSASQRELVRIHINSILAEYRFYIRNIKNEMDVNKTNQEVIEIDI 204

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +    ++++  + +   + L++ N +   +L +Q++ +  +  E      E K +    +
Sbjct: 205 AEFGKMIANINQRVEARETLYKSNMIGNVELLEQKKELLTAVREKTLRHAELKVLGSQYH 264

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L ++  +  A   +E    L + +   A    KL   ++    +TI +P+ GT+     
Sbjct: 265 SLEEQLMMYEAQRRREWHDKLSEVRVNLASTEQKLKQSQERHRLETIYAPLDGTVQQLAV 324

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     Q +Q L+ IVPH  +     KV  K    +  G   TV+   Y   R     A
Sbjct: 325 HTIGGVVQPAQVLLLIVPHDGIQLAEIKVKNKDAGFITPGQPVTVKVDSYPYTRYGTIDA 384

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           +++ I     + +        Y + LK   +      + L +G             +   
Sbjct: 385 VVKHISQDSMEDEQLGMVFLAY-IELKENHIVVDGKPVRLSSGMSVVAEIKTGKRLVIDY 443

Query: 426 IIHPITDNWPKI 437
           I+ PI +   + 
Sbjct: 444 ILSPIREYKAEA 455


>gi|118602294|ref|YP_903509.1| secretion protein HlyD family protein [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
 gi|118567233|gb|ABL02038.1| secretion protein HlyD family protein [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
          Length = 389

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 77/425 (18%), Positives = 154/425 (36%), Gaps = 62/425 (14%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +  + + G I  I W+ L  I+ +V   G+++   +   I+    G++ K  V  G  + 
Sbjct: 16  IVYVLLGGFIAFILWASLFDIDETVRCQGKVVANGSSQIIQVADGGVLSKLLVSEGEHVQ 75

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           Q   L T E        D  + S   +R  +   KSAL   N +       F+   +   
Sbjct: 76  QRQLLATLEK-------DRAQASYYEIRSQVAYLKSALARANAEILEKPIVFDELTKNYP 128

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           DF+    +   +                          +  L  + S+L   L+ + ++ 
Sbjct: 129 DFMNAQKALYVQ-------------------------KKRSLNQEVSMLEEGLAMNIEEW 163

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + ++L +   VSQ ++ + ++ V    L  +  + + KN                  Y 
Sbjct: 164 EITQSLEKTGDVSQLEVLRAKQKV----LYFKRKVVDTKN-----------------KYY 202

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++ S ++E+ +   A  + KL   +   E   I SP++G +   +  +     +  + LM
Sbjct: 203 EKTSSEIEKLEGELAKNLYKLKKQKSVLEYTNIYSPVSGIVKELKVTTVGGVLRAGEQLM 262

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +I P      + AK+ P  I  +K G    ++   +        K  +  I        +
Sbjct: 263 EISPSQGGVILEAKINPVDIGRLKLGMPVMIKLDAFDYTIFGGLKGTLNYISSDTLLDKD 322

Query: 380 NLQTQ-EYYEVILKITDLAFSDN------NIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
               Q  +Y+V +KI    + DN      N++L  G    +       +L   +I PI+ 
Sbjct: 323 PSGRQITFYQVNVKIEGPEYEDNVKSKVINVKL--GMSGTIDVKVGKRSLFTYLIKPISR 380

Query: 433 NWPKI 437
            +   
Sbjct: 381 GFSGA 385


>gi|110644660|ref|YP_672390.1| hemolysin D [Escherichia coli 536]
 gi|23954240|emb|CAD42037.1| HlyD protein [Escherichia coli]
 gi|110346252|gb|ABG72489.1| hemolysin D [Escherichia coli 536]
          Length = 478

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 66/427 (15%), Positives = 155/427 (36%), Gaps = 3/427 (0%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++       + +    +  ++     S+L  +EI  +++G++       EIK   + I+K
Sbjct: 49  IETPVSRRPRLVAYFIMGFLVIAFILSVLGQVEIVATANGKLTLSGRSKEIKPIENSIVK 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G  + +G  LL           D  K     L+  ++  +  +   + + + L 
Sbjct: 109 EIIVKEGESVRKGDVLLKL--TALGAEADTLKTQSSLLQARLEQIRYQILSRSIELNKLP 166

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +     E    +   +     + +     S+       K   +      RL +  + +  
Sbjct: 167 ELKLPDESYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTILARINRY 226

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             L    +  L   ++L  K A++++ + +QE    ++  ELR    + + +   I    
Sbjct: 227 ENLSRVEKSRLDDFRSLLHKQAIAKHAVLEQENKYVEAANELRVYKSQLEQIESEILSAK 286

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  L    +  EI   L Q   +      +L   E+ ++   I +P++G +   +  + 
Sbjct: 287 EEYQLVTQLFKNEILDKLRQTTDSIELLTLELEKNEERQQASVIRAPVSGKVQQLKVHTE 346

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP      + A V  K I  +  G  A ++   +   R       ++
Sbjct: 347 GGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVK 406

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I+    +            V ++  DL+  + +I L +G            ++   ++ 
Sbjct: 407 NINLDAIEDQKLGLVFNV-IVSVEENDLSTGNKHIPLSSGMAVTAEIKTGMRSVISYLLS 465

Query: 429 PITDNWP 435
           P+ ++  
Sbjct: 466 PLEESVT 472


>gi|82582330|gb|ABB84253.1| leukotoxin translocon membrane fusion protein [Mannheimia
           ruminalis]
          Length = 478

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 70/429 (16%), Positives = 160/429 (37%), Gaps = 25/429 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ ++  I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +             N +Y  L  A E+    
Sbjct: 118 VEKGQLLVSLTALGSEADIKKTIASLSLEKLE-----------NYRYQTLLTAIENESLP 166

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKSSL-----LR 189
           ++D      +  S+     I  +         K    +++   R D E +++        
Sbjct: 167 VIDLSKTEFNDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKDAEKQTTSAYVRKYE 226

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                 Q+ L   K L+++ ++S+++L  QE    ++  EL     +   +   +  + +
Sbjct: 227 GATRIEQEKLKDFKALYQQKSLSKHELLSQENKAIEAQNELAVYRSKLNELENDLLNVKE 286

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E  L    +  ++   L+Q+         +L    + R+   I +P++GT+   +  +  
Sbjct: 287 ELELITQFFKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVSGTVQQLKIHTIG 346

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                ++ LM IVP   +    A V  K I  V  G    ++   +   R       I+ 
Sbjct: 347 GVVTTAETLMIIVPKDDVLEATALVQNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKH 406

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEI 426
           I P   +Q N       +   + I     +     NI+L +G            ++   +
Sbjct: 407 ISPDAIEQPNVGLV---FNATIAIDRKNLTSPDGRNIDLSSGMTITAEIKTGERSVMSYL 463

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 464 LSPLEESVT 472


>gi|123194|sp|P09986|HLYDC_ECOLX RecName: Full=Hemolysin secretion protein D, chromosomal
 gi|146381|gb|AAA23977.1| chromosomal hemolysin D (hlyD) [Escherichia coli]
 gi|94480753|emb|CAK02717.1| HlyD protein [Escherichia coli]
 gi|158147672|emb|CAM84379.1| hemolysin secretion protein HlyD [Escherichia coli]
          Length = 478

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 65/427 (15%), Positives = 155/427 (36%), Gaps = 3/427 (0%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++       + +    +  ++     S+L  +EI  +++G++       EIK   + I+K
Sbjct: 49  IETPVSRRPRLVAYFIMGFLVIAFILSVLGQVEIVATANGKLTLSGRSKEIKPIENSIVK 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G  + +G  LL           D  K     L+  ++  +  +   + + + L 
Sbjct: 109 EIIVKEGESVRKGDVLLKL--TALGAEADTLKTQSSLLQARLEQIRYQILSRSIELNKLP 166

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +     E    +   +     + +     S+       K   +      RL +  + +  
Sbjct: 167 ELKLPDEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTILARINRY 226

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             +    +  L   ++L  K A++++ + +QE    ++  ELR    + + +   I    
Sbjct: 227 ENVSRVEKSRLDDFRSLLHKQAIAKHAVLEQENKYVEAANELRVYKSQLEQIESEILSAK 286

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  L    +  EI   L Q   +      +L   E+ ++   I +P++G +   +  + 
Sbjct: 287 EEYQLVTQLFKNEILDKLRQTTDSIELLTLELEKNEERQQASVIRAPVSGKVQQLKVHTE 346

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP      + A V  K I  +  G  A ++   +   R       ++
Sbjct: 347 GGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVK 406

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I+    +            V ++  DL+  + +I L +G            ++   ++ 
Sbjct: 407 NINLDAIEDQKLGLVFNV-IVSVEENDLSTGNKHIPLSSGMAVTAEIKTGMRSVISYLLS 465

Query: 429 PITDNWP 435
           P+ ++  
Sbjct: 466 PLEESVT 472


>gi|312885253|ref|ZP_07744931.1| RTX toxin transporter [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367112|gb|EFP94686.1| RTX toxin transporter [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 453

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 73/431 (16%), Positives = 163/431 (37%), Gaps = 12/431 (2%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +L    P+   R+T LS+ IG+I  + W+    +++  +++G ++       I++     
Sbjct: 30  SLSHQPPSPFARLTALSLSIGVIVTLLWAYFGKLDVQATATGRLIVSGRSQVIQAYEQSR 89

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V +G Q+    PLLT + +  +  ++     +      +   +S L   + + D 
Sbjct: 90  VMQIHVRDGQQVKMDDPLLTVDILGVSQDLERLNSEVNFQTQELILYRSLLLGQDIEND- 148

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                    EQ L     +     + ++        +L    + M   + ++   ++   
Sbjct: 149 ---------EQFLSISVIHRDQLIESYHIEHQEFLTTLADIQSEMDVNHTSQSAHQSDIE 199

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L  L ++    L   K L +  A+S+ +  +QE+ + ++  +L +   + K +    + 
Sbjct: 200 ALDQLRNNISLRLQARKALNQARAISRVEYLEQEKELLETDRQLAQQKAQLKVLQSEHHG 259

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L    N   A    E      Q   T      +L+  ++ +E + I SP+ GT+     F
Sbjct: 260 LTQRMNSFKAQRKGEWLDKKRQASLTLKALKQQLSTAQERQELEIIRSPVNGTVQQLNIF 319

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q +Q LM IVP + +     K+  K +  V  G   T++   ++  R    +A 
Sbjct: 320 TLGAVLQPAQSLMIIVPENTVQQAEVKILNKDVGFVYSGQKVTLKVDAFSYTRYGTIEAE 379

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  +    +  +          V LK  ++   +  + L  G             +   +
Sbjct: 380 LISVSRDSTADEQLGLIFP-ALVELKTNNIVIDEKPVTLLPGMSVVAEIKTDKRRIIDYV 438

Query: 427 IHPITDNWPKI 437
           + PI +   + 
Sbjct: 439 LSPIREYQAEA 449


>gi|121609531|ref|YP_997338.1| HlyD family type I secretion membrane fusion protein
           [Verminephrobacter eiseniae EF01-2]
 gi|121554171|gb|ABM58320.1| type I secretion membrane fusion protein, HlyD family
           [Verminephrobacter eiseniae EF01-2]
          Length = 480

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 56/430 (13%), Positives = 144/430 (33%), Gaps = 9/430 (2%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
               +L+    +   R+ L  +IG   L + W+    I++  ++ G+++  D    I+  
Sbjct: 50  PAALSLQETPVSPAPRVALWLLIGFASLVLLWASFGHIDVVATAQGKVVPNDRTKTIQPF 109

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +  +K   V +G Q+  G  L+  +        +  +  +   R  +   ++ L  L++
Sbjct: 110 ETATVKAIHVTDGQQVNAGDVLIELDATSAQAEQERVQGDLAAARLQVARGQAMLAALDS 169

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +        ++          +     ++   S +      +   +R +        
Sbjct: 170 GRALRLNCPARVDDARCTQARLLLAGQMAEYSARQSRIEAETAKREAELRGV-------R 222

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                L   +   ++     ++L +++ VS++   ++++   +   +L    +  + +  
Sbjct: 223 ELVHKLEQTVLIAKQREQDFRHLLDQDFVSKHGYLERQQAHIEQEADLAHLRNRLQEIEA 282

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + E + +     A   +     +   Q+  A     L   +       ++SP+ GT+  
Sbjct: 283 ALREAHGQREASMAEARRASLDSITDGQQKAAALEQDLLRADVRGRLMQLISPVDGTVQQ 342

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +       +QP+M IVP      + A +  K I  VK    A V+   +   +   
Sbjct: 343 LALHTLGGVVTPAQPVMLIVPRDNALEVEAFLENKDIGFVKPQQDAQVKIETFQYTKYGT 402

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
            +A +  +       D          V ++   +      + L  G    V        +
Sbjct: 403 IRAKVASVSHDAINDDRRGLIYS-TRVRMEKASIDVDGQPVRLSPGMAVSVEIKTGKRRV 461

Query: 423 AQEIIHPITD 432
            +  + P+  
Sbjct: 462 IEYFLSPLMQ 471


>gi|325920039|ref|ZP_08182016.1| type I secretion membrane fusion protein, HlyD family [Xanthomonas
           gardneri ATCC 19865]
 gi|325549483|gb|EGD20360.1| type I secretion membrane fusion protein, HlyD family [Xanthomonas
           gardneri ATCC 19865]
          Length = 473

 Score =  239 bits (610), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 52/424 (12%), Positives = 140/424 (33%), Gaps = 9/424 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L     +   R T+  IIG   + + W+ L  ++I   + G+ + +     +++  + +
Sbjct: 47  ELTETPVSPTARWTMRIIIGFFCVALLWACLGKLDIVAVAPGKTVVDSRTKVVQTAETAV 106

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  V +G  + +G  L+  +   T         ++ N R     + +    +      
Sbjct: 107 VRRILVRDGQAVKKGQLLVELDATATGAEFAQAGDALINARLAALRQAALATAIATGQPP 166

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                     + +    +  S+    F     ++  S+  +   +++       L   + 
Sbjct: 167 RLDPAPDLPAERVANEQQLVSSQFDAFQARRHNLQASIAQRQAELQTTQDAIEPLAESAR 226

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           + +     + +       L E   V ++D   +E+    +  +L    +  + +   I+ 
Sbjct: 227 ISKVRAEDYGR-------LVEGKYVGRHDYLLREQERIAAESQLATQRNRLQEIRSAISA 279

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             +E  +   +  ++    L Q           +    +  +   + +P+ GTI      
Sbjct: 280 AQEELRVLVTDTCQQALDALRQASEQAGQLTQDVAKTGQRDKLMALHAPVDGTIQQLAVH 339

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +QPL+ +VP  +   +   V  K I  ++ G   TV+   +   R       
Sbjct: 340 TVGGVVTPAQPLLVVVPAEEALEVEVTVLNKDIGFMRPGQPVTVKVESFPYTRYGYLTGT 399

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  +    +Q +          + L  + L      + +  G             +   +
Sbjct: 400 VASVSHDAAQDEKLGLVFP-ARIKLNGSTLEIDGVKVRMSAGMSLSAEVKTGKRRVIDYL 458

Query: 427 IHPI 430
           + P+
Sbjct: 459 LSPL 462


>gi|26249409|ref|NP_755449.1| hemolysin D [Escherichia coli CFT073]
 gi|301017937|ref|ZP_07182562.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 69-1]
 gi|26109817|gb|AAN82022.1|AE016766_110 Hemolysin D [Escherichia coli CFT073]
 gi|300399932|gb|EFJ83470.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 69-1]
          Length = 478

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 66/427 (15%), Positives = 155/427 (36%), Gaps = 3/427 (0%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++       + +    +  ++  +  S+L  +EI  +++G++       EIK   + I+K
Sbjct: 49  IETPVSRRPRLVAYFIMGFLVIAVILSVLGQVEIVATANGKLTLSGRSKEIKPIENSIVK 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G  + +G  LL           D  K     L+  ++  +  +   + + + L 
Sbjct: 109 EIIVKEGESVRKGDVLLKL--TALGAEADTLKTQSSLLQTRLEQTRYQILSRSIELNKLP 166

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +     E    +   +     + +     S+       K   +      RL +  + +  
Sbjct: 167 ELKLPDEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTILARINRY 226

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             L    +  L   ++L  K A++++ + +QE    ++  ELR    + + +   I    
Sbjct: 227 ENLSRVEKSRLDDFRSLLHKQAIAKHAVLEQENKYVEAANELRVYKSQLEQIESEILSAK 286

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  L    +  EI   L Q          +L   E+ ++   I +P++G +   +  + 
Sbjct: 287 EEYQLVTQLFKNEILDKLRQTTDNIELLTLELEKNEERQQASVIRAPVSGKVQQLKVHTE 346

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP      + A V  K I  +  G  A ++   +   R       ++
Sbjct: 347 GGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVK 406

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I+    +            V ++  DL+  + +I L +G            ++   ++ 
Sbjct: 407 NINLDAIEDQKLGLVFNV-IVSVEENDLSTGNKHIPLSSGMAVTAEIKTGMRSVISYLLS 465

Query: 429 PITDNWP 435
           P+ ++  
Sbjct: 466 PLEESVT 472


>gi|83648754|ref|YP_437189.1| membrane-fusion protein [Hahella chejuensis KCTC 2396]
 gi|83636797|gb|ABC32764.1| Membrane-fusion protein [Hahella chejuensis KCTC 2396]
          Length = 456

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 59/429 (13%), Positives = 138/429 (32%), Gaps = 11/429 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            +++   + L R  L +I+ +  + + W+    I+I   + G+++  + V  I+   + +
Sbjct: 28  EIEQTPASPLGRAILWAIVLLFTIAVIWACFGKIDIVAVTQGKVIPSERVKTIQPLETAV 87

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I K  V +G Q+  G  L+T +  +    +       +         K+  D+L      
Sbjct: 88  ISKIHVSDGQQVKAGDLLITLDGAQAEADLRRLDGEWRESAAQSQRYKAMADWLQQ---- 143

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E+A      +              +     +     L         +         + +
Sbjct: 144 -ERAGSPVMPENDALPASLQQQHRNLLQQEAAEFTARLNALKREAARLNAEHEMTVAEIT 202

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
               ++   ++ +  +  +  +   S+    + ++ + +   +L       K +   +  
Sbjct: 203 KQSRIMEVLRERVNALDVMQNRKLGSRVQYLELKQELIEVEQDLAVQQARLKQLGASLAA 262

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +         K       +     A    +    ++   Q  + +PI GT+      
Sbjct: 263 NEAQQETLLHEQYKNTLAQWREADTRAASLQEERIKADQRSRQTRLTAPIDGTVQQLAVH 322

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +Q LM IVP      + A V  K I  V++G+ A V+   +   +     A 
Sbjct: 323 TVGGVVTPAQELMLIVPEHSEMEVEALVLNKDIGFVQEGHFAEVKVDTFNFTKYGIIDAE 382

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQ 424
           +  +     Q +N       Y+  LK+     +  N  + L  G             L +
Sbjct: 383 LVDLSDDAIQDENLGLV---YKARLKLKQDGLTVENKYVRLSPGMSVTSEIKTGQRRLIE 439

Query: 425 EIIHPITDN 433
             + P+   
Sbjct: 440 YFLSPLLRY 448


>gi|260222765|emb|CBA32651.1| hypothetical protein Csp_D33210 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 506

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 68/439 (15%), Positives = 143/439 (32%), Gaps = 25/439 (5%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            HPA  +R+  +    ++  + W+    I++   + G ++  +    I+   +  ++   
Sbjct: 62  PHPAP-RRIMAIICTCVVAALIWAAFGKIDVVALAPGRVIVSERSKVIQPLEAATVRAIH 120

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN--KYDVLEK 129
           V++G ++ +G  L+  +  +        K              S    LN+  +  + E+
Sbjct: 121 VQDGQEVQEGQLLIELDSTQVGAEHSQNKQQWLAANSEKLRSHSLQRALNSGGQPALAEQ 180

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                         +   T  +        +    +     +++        +   + L+
Sbjct: 181 QSSLWCAATKIESCESWQTLRQQLQTEWQDIRSKRERLAATVQTRESQIQVSKAAINRLQ 240

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           +LL +  +       L ++  VSQ+ L  + R       EL     E    +      + 
Sbjct: 241 SLLVTLNQREVDYAALAQQGFVSQHGLQDKTRDRQDIDNELLRVRAELTTAMS----AHQ 296

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTI----LEKTREQKTILSPIAGTIVYNQS 305
           EA  E   YL EI + L Q Q T   E+ +L       ++  E   + SP+ GT+     
Sbjct: 297 EALKEQNAYLAEIQKSLAQRQFTAQQEIERLAQEQVKSQQRLELLQLRSPVKGTVQQLAV 356

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           F++      +Q LM IVP +        V  K I  +  G    ++   +   R      
Sbjct: 357 FTAGGVVTPAQALMVIVPAAHDISAEVMVANKDIGFIHTGQKVRIKLETFNFTRYGTIDG 416

Query: 366 IIEKIDPIISQQD------------NNLQTQEYYEVILKITDLAF--SDNNIELRNGFPA 411
            +  +      +D            N      Y+   +K+           + +  G   
Sbjct: 417 EVTWVSADALTRDPQNSNSANNPASNGQAPLAYFPAHVKLNKQTIDVEGKTMPVTPGLNI 476

Query: 412 EVLFTAKNTTLAQEIIHPI 430
                    T+   ++ PI
Sbjct: 477 TAEIKTGRRTVLDYLLSPI 495


>gi|300981331|ref|ZP_07175467.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 45-1]
 gi|301050623|ref|ZP_07197491.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 185-1]
 gi|300297689|gb|EFJ54074.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 185-1]
 gi|300408991|gb|EFJ92529.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 45-1]
          Length = 478

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 64/427 (14%), Positives = 155/427 (36%), Gaps = 3/427 (0%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++       + +    +  ++     S+L  +EI  +++G++       EIK   + I+K
Sbjct: 49  IETPVSRRPRLVAYFIMGFLVIAFILSVLGQVEIVATANGKLTLSGRSKEIKPIENSIVK 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G  + +G  LL           D  K     L+  ++  +  +   + + + L 
Sbjct: 109 EIIVKEGESVRKGDVLLKL--TALGAEADTLKTQSSLLQARLEQIRYQILSRSIELNKLP 166

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +     E    +   +     + +     S+       K   +      RL +  + +  
Sbjct: 167 ELKLPDEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTILARINRY 226

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             +    +  L   ++L  K A++++ + +QE    ++  ELR    + + +   I    
Sbjct: 227 ENVSRVEKSRLDDFRSLLHKQAIAKHAVLEQENKYVEAANELRVYKSQLEQIESEILSAK 286

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  L    +  EI   L Q   +      +L   E+ ++   I +P++G +   +  + 
Sbjct: 287 EEYQLVTQLFKNEILDKLRQTTDSIELLTLELEKNEERQQASVIRAPVSGKVQQLKVHTE 346

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP      + A V  K I  +  G  A ++   +   R       ++
Sbjct: 347 GGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVK 406

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I+    +            V ++  +L+  + +I L +G            ++   ++ 
Sbjct: 407 NINLDAIEDQKLGLVFNV-IVSVEENELSTGNKHIPLSSGMAVTAEIKTGMRSVISYLLS 465

Query: 429 PITDNWP 435
           P+ ++  
Sbjct: 466 PLEESVT 472


>gi|110643971|ref|YP_671701.1| hemolysin D [Escherichia coli 536]
 gi|24528032|emb|CAD33761.1| Hemolysin D [Escherichia coli]
 gi|110345563|gb|ABG71800.1| hemolysin D [Escherichia coli 536]
          Length = 478

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 66/427 (15%), Positives = 155/427 (36%), Gaps = 3/427 (0%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++       + +    +  ++     S+L  +EI  +++G++       EIK   + I+K
Sbjct: 49  IETPVSRRPRLVAYFIMGFLVIAFILSVLGQVEIVATANGKLTLSGRSKEIKPIENSIVK 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G  + +G  LL           D  K     L+  ++  +  +   + + + L 
Sbjct: 109 EIIVKEGESVRKGDVLLKL--TALGAEADTLKTQSSLLQTRLEQIRYQILSRSIELNKLP 166

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +     E    +   +     + +     S+       K   +      RL +  + +  
Sbjct: 167 ELKLPDEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTILARINRY 226

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             L    +  L   ++L  K A++++ + +QE    ++  ELR    + + +   I    
Sbjct: 227 ENLSRVEKSRLDDFRSLLHKQAIAKHAVLEQENKYVEAANELRVYKSQLEQIESEILSAK 286

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  L    +  EI   L Q   +      +L   E+ ++   I +P++G +   +  + 
Sbjct: 287 EEYQLVTQLFKNEILDKLRQTTDSIELLTLELEKNEERQQASVIRAPVSGKVQQLKVHTE 346

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP      + A V  K I  +  G  A ++   +   R       ++
Sbjct: 347 GGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVK 406

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I+    +            V ++  DL+  + +I L +G            ++   ++ 
Sbjct: 407 NINLDAIEDQKLGLVFNV-IVSVEENDLSTGNKHIPLSSGMAVTAEIKTGMRSVISYLLS 465

Query: 429 PITDNWP 435
           P+ ++  
Sbjct: 466 PLEESVT 472


>gi|238785608|ref|ZP_04629587.1| Hemolysin transport protein [Yersinia bercovieri ATCC 43970]
 gi|238713495|gb|EEQ05528.1| Hemolysin transport protein [Yersinia bercovieri ATCC 43970]
          Length = 461

 Score =  239 bits (610), Expect = 7e-61,   Method: Composition-based stats.
 Identities = 62/429 (14%), Positives = 146/429 (34%), Gaps = 11/429 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R     ++ ++ ++ WSI+  ++I  S++G+++  ++   I+    G++ 
Sbjct: 40  VERPVAPLARRTAWFLVLTLLLVLLWSIVGKLDIHASANGKVIVSEHSKVIQPLEPGVVA 99

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +G ++  G  LL    I     +      + +         + L          +
Sbjct: 100 AINVRDGDRVEAGQVLLELNPIGIDAELGNINKQLIHRLLEAARMVALL------SSDPQ 153

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             F S  +   D L    +   K  +   + + R    +      I     ++ N+  L+
Sbjct: 154 AHFVSPPDTPEDLLLMTQALLRKEHDEVNAELARMASEQAVNQAHIAAGIANIANQKVLM 213

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +    +  + L  ++ L +  ++++ +L  QER    ++ E      EQ  +      L 
Sbjct: 214 K----NIHQRLQALRTLAKSKSIAEVELLVQEREWLNASAEASRFQSEQAILEAKTRNLT 269

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A   +     L +          +   L + + Q+ + +P+AG I      + 
Sbjct: 270 QTRLHYLAEKKRSYQERLNKAHEVINQLEQEQIKLMEKQRQQRLRAPVAGVIQQLAVHTL 329

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP +    +   V  K +  V  G    V+   +   R       ++
Sbjct: 330 GGVVTAAQPLMVLVPENHPLELDVMVLNKDVGFVLPGQAVEVKVDSFPYTRFGTLSGEVK 389

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +     +            + L    L  +   + L  G    V        +   ++ 
Sbjct: 390 HLSHDAMEDQQLGLVFP-ARIRLDSDTLMVAGKAVRLSAGMAVSVEIKTGQRRVIDYLLS 448

Query: 429 PITDNWPKI 437
           P+ +   + 
Sbjct: 449 PLQEYQSEA 457


>gi|91213872|ref|YP_543858.1| hemolysin D [Escherichia coli UTI89]
 gi|191170835|ref|ZP_03032387.1| leukotoxin secretion protein D [Escherichia coli F11]
 gi|300974726|ref|ZP_07172715.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 200-1]
 gi|91075446|gb|ABE10327.1| hemolysin D [Escherichia coli UTI89]
 gi|190909059|gb|EDV68646.1| leukotoxin secretion protein D [Escherichia coli F11]
 gi|300308859|gb|EFJ63379.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 200-1]
 gi|307629391|gb|ADN73695.1| hemolysin D [Escherichia coli UM146]
 gi|315290888|gb|EFU50257.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 153-1]
 gi|324010976|gb|EGB80195.1| type I secretion membrane fusion protein, HlyD family [Escherichia
           coli MS 60-1]
          Length = 478

 Score =  239 bits (609), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 66/427 (15%), Positives = 156/427 (36%), Gaps = 3/427 (0%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++       + +    +  ++  +  S+L  +EI  +++G++       EIK   + I+K
Sbjct: 49  IETPVSRRPRLVAYFIMGFLVIAVILSVLGQVEIVATANGKLTLSGRSKEIKPIENSIVK 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G  + +G  LL           D  K     L+  ++  +  +   + + + L 
Sbjct: 109 EIIVKEGESVRKGDVLLKL--TALGAEADTLKTQSSLLQTRLEQTRYQILSRSIELNKLP 166

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +     E    +   +     + +     S+       K   +      RL +  + +  
Sbjct: 167 ELKLPDEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTILARINRY 226

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             L    +  L   ++L  K A++++ + +QE    ++  ELR    + + +   I    
Sbjct: 227 ENLSRVEKSRLDDFRSLLHKQAIAKHAVLEQENKYVEAANELRVYKSQLEQIESEILSAK 286

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  L    +  EI   L Q   +      +L   E+ ++   I +P++G +   +  + 
Sbjct: 287 EEYQLVTQLFKNEILDKLRQTTDSIELLTLELEKNEERQQASVIRAPVSGKVQQLKVHTE 346

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP      + A V  K I  +  G  A ++   +   R       ++
Sbjct: 347 GGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVK 406

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I+    +            V ++  DL+  + +I L +G            ++   ++ 
Sbjct: 407 NINLDAIEDQKLGLVFNV-IVSVEENDLSTGNKHIPLSSGMAVTAEIKTGMRSVISYLLS 465

Query: 429 PITDNWP 435
           P+ ++  
Sbjct: 466 PLEESVT 472


>gi|291614061|ref|YP_003524218.1| type I secretion membrane fusion protein, HlyD family [Sideroxydans
           lithotrophicus ES-1]
 gi|291584173|gb|ADE11831.1| type I secretion membrane fusion protein, HlyD family [Sideroxydans
           lithotrophicus ES-1]
          Length = 452

 Score =  239 bits (609), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 58/439 (13%), Positives = 142/439 (32%), Gaps = 24/439 (5%)

Query: 8   NLKRNHPASLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++ + PA L R  + ++  +   L+ W++   + I  S+ G ++ +  V  ++   +GI
Sbjct: 21  AIQESPPARLPRSVMYTVAALFTILVLWAVFGKLNIIASAEGRLVPQTYVKIVQPADAGI 80

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  V+ G ++  G  L+  +              +      +      +D   N   +
Sbjct: 81  VQEILVKEGQKVEAGQVLMRMDTKLAEADAKTIGNDLSIRSLQLRR----IDAELNGTPL 136

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L KA +     L   +   +    + +   +     +L        S       LE  + 
Sbjct: 137 LRKADDP--ADLFRQVDAQYRDHRQSYLDALEQAQAALSKAQREYDSAKDVLAKLEETTP 194

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           +L+    ++        ++ ++    Q  +  ++R   +   +LR       ++   IN+
Sbjct: 195 ILKQQAEAYA-------DMGKEGYAPQVTVRDKQREYLEKARDLRAQESTVASLEAAINQ 247

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              + ++  + Y  ++  +    +  +          E       + +P AG +    + 
Sbjct: 248 AKKQIDMITSKYRSDLRNERMDAEGQYRKLGQDWVKQEHKNGLLELRAPQAGIVNDLATH 307

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           ++         L+ IVP ++       V    +  V       V+   Y           
Sbjct: 308 TAGTVVSPGTVLLSIVPENEPLIAEISVKNDDVGFVYPKQKVKVKLAAYPFEEYGMLDGE 367

Query: 367 IEKIDPII--------SQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFT 416
           +  I P              N  Q    Y+ I+ +            +L  G        
Sbjct: 368 VIHIGPDASTPDAQGKDSNTNKQQQPSIYKAIVALDQQTLDADGKQHKLVAGMQVVAEIN 427

Query: 417 AKNTTLAQEIIHPITDNWP 435
               T+ Q ++ P+T  + 
Sbjct: 428 QGRRTVMQYLLSPVTKTFD 446


>gi|146343682|ref|YP_001208730.1| HlyD family secretion protein [Bradyrhizobium sp. ORS278]
 gi|146196488|emb|CAL80515.1| Putative HlyD family secretion protein [Bradyrhizobium sp. ORS278]
          Length = 498

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 60/441 (13%), Positives = 146/441 (33%), Gaps = 29/441 (6%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           +L+         I+G I W+ L  +++   + G+++    V  ++   + +I+   V+ G
Sbjct: 64  TLRLTAATLCAIIVGAIAWASLSHLDMVAVADGKVVPLGQVKVVQPLETAMIRAIHVDEG 123

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  L+  +  E    +D  +      +  +D E + +    N     E+ F    
Sbjct: 124 DHVRAGQLLVDLDPTEARADLDSLRSV--RAQAALDAEVARVLLTRN----AEEEFRPPA 177

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +     + +      +     +++    L     +  ++  N   +E     ++  +   
Sbjct: 178 DADPVLVTQSRDQARREIEKHLATTAAYLADIAQKSAALEANDAQIER----VQLTIPLL 233

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+   + K LFEK   ++  + + E+ + +   ELR        +   I  L        
Sbjct: 234 QEKNDVAKGLFEKGYGARPPVLESEQQLVEKRAELRAAQVNVDQIQAEIRALKARLAEAA 293

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A YL + +    +     A     LT   +    + +++P+ G++   +  +       +
Sbjct: 294 AGYLADATDRRTKALTKVAQLDQDLTKARQKESYRRLVAPVDGSVQGLKIHTPGAVVTTA 353

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM IVP      +   +  K I  V +G    V+   +   R       + K+    +
Sbjct: 354 DTLMTIVPDGTGIEVDCLIANKDIGFVSEGQDVEVKLEAFPFTRFGLVHGRVRKLGRDAA 413

Query: 376 QQDNNLQT-----------------QEYYEVILKITD--LAFSDNNIELRNGFPAEVLFT 416
              N                     +  Y   + +    +  +  +  +R G        
Sbjct: 414 TSPNAPPGSTAALMTQSANLPGAPPELSYPAKVTLAQDWIEVNGRHEPIRPGMRVSAEIK 473

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                + + ++ P+     + 
Sbjct: 474 TGERRVIEYLLSPVVQAVKEA 494


>gi|150515|gb|AAA25545.1| leukotoxin (LktD) [Mannheimia haemolytica]
          Length = 478

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 58/421 (13%), Positives = 151/421 (35%), Gaps = 9/421 (2%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ ++  I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +      ++ L  +  +        +    +
Sbjct: 118 VEKGQLLVSLTALGSDADIKKTMASLSLAKLETYRYQTLLTAIEKESL---PVIDLSRTE 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D   +       +     ++  +    K    +     +  +              Q+
Sbjct: 175 FKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTIFAYVRKYEGATRIEQE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   K L+++ ++S+++L  QE  + ++   +     +   +   +  + +E  L    
Sbjct: 235 KLKDFKALYKQKSLSKHELLAQENKLIEAQNAVAVYRSKLNELENDLLNVKEELELITQF 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  ++   L+Q+         +L    + R+   I +P++GT+   +  +       ++ 
Sbjct: 295 FKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVSGTVQQLKIHTIGGVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP   +    A V  K I  V  G    ++   +   R       I+ I P   +Q
Sbjct: 355 LMIIVPEDDVLEATALVPNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHISPDAIEQ 414

Query: 378 DNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            N       +   + I     +      I+L +G            ++   ++ P+ ++ 
Sbjct: 415 PNVGLV---FNATIAIDRKNLTSPDGRKIDLSSGMTITAEIKTGERSVMSYLLSPLEESV 471

Query: 435 P 435
            
Sbjct: 472 T 472


>gi|15987948|gb|AAL12809.1| lktD [Mannheimia glucosida]
          Length = 472

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 61/421 (14%), Positives = 152/421 (36%), Gaps = 9/421 (2%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ ++  I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +      ++ L  +  +        +  + +
Sbjct: 118 VEKGQLLVSLTALGSEADIKKTIASLSLEKLENYRYQTLLTAIEKESL---PVIDLSKTE 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D   +       +     ++  +    K    +  Y  +                 Q+
Sbjct: 175 FNDSSEEDRLRIKHLIEEQYTTWQKQKMQKTLAYKRKYAEKQTTSAYVRKYEGATRIEQE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   K L+++ ++S+++L  QE    ++  EL     +   +   +  + +E  L    
Sbjct: 235 KLKDFKALYQQKSLSKHELLSQENKAIEAQNELAVYRSKLNELENDLLNVKEELELITQF 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  ++   L+Q+         +L    + R+   I +P++GT+   +  +       ++ 
Sbjct: 295 FKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVSGTVQQLKIHTVGGVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP   +    A V  K I  V  G    ++   +   R       I+ I P   +Q
Sbjct: 355 LMIIVPEDDVLEATALVQNKDIGFVTAGQEVIIKVETFPYTRYGYLTGRIKHISPDAIEQ 414

Query: 378 DNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            N       +   + I     +      I+L +G            ++   ++ P+ ++ 
Sbjct: 415 PNVGLV---FNATMTIDKKNLTSPDGRKIDLSSGMTITAEIKTGERSVMSYLLSPLEESV 471

Query: 435 P 435
            
Sbjct: 472 T 472


>gi|218458944|ref|ZP_03499035.1| probable protein secretion protein, HlyD family [Rhizobium etli Kim
           5]
          Length = 365

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 51/364 (14%), Positives = 127/364 (34%), Gaps = 11/364 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +  +       W++L P++ +  + G I    +   I+    GII      NG  +  G 
Sbjct: 10  IIFLFFGMAGGWAMLAPLDSAAVAPGVIKVAGDRKLIQHLEGGIIADLNAANGDIVKAGK 69

Query: 83  PLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            L+  +  +    +DL +  I     L   +  E+     +     +L    +S  + + 
Sbjct: 70  VLIQLDGTQARTKLDLLQNRIATREALAARLRAERDDKAEIEFDSALLANPTKSAMDAV- 128

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                  +    VF     ++    ++   R R        L+         +   + + 
Sbjct: 129 -------AAQRDVFAAKHHNLQDEREILSQRRRQTQEEITGLQELIVTEDRQIEVFEGET 181

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +++L ++  V++       R   +   E   N+         + E+  +        L
Sbjct: 182 KDLESLLKRGLVTRERWLLLRRQQREVEGERATNVAAIARARSAMAEIDMQILNLSTLRL 241

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E   +L + +    D   +    +    +  +++P+ G ++  +  ++    +  + LM
Sbjct: 242 HEAVEELSKVEAELVDLRQEERAAKDVLARTNVVAPVDGIVMDLKVHTTGGVVKPGETLM 301

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +VP  +   + A V P+ ++ +  G  A V FP +A       + ++E +      ++ 
Sbjct: 302 TVVPLGQQLVVEAMVRPEDVETIAPGQRARVSFPAFARYNLPPLEGVVEIVSADRMVEER 361

Query: 380 NLQT 383
           +   
Sbjct: 362 SGAP 365


>gi|227885276|ref|ZP_04003081.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Escherichia coli 83972]
 gi|158147663|emb|CAM84371.1| hemolysin secretion protein HlyD [Escherichia coli ABU 83972]
 gi|158147667|emb|CAM84375.1| hemolysin secretion protein HlyD [Escherichia coli]
 gi|227837802|gb|EEJ48268.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Escherichia coli 83972]
 gi|307556487|gb|ADN49262.1| hemolysin secretion protein D [Escherichia coli ABU 83972]
          Length = 478

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 65/427 (15%), Positives = 155/427 (36%), Gaps = 3/427 (0%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++       + +    +  ++     S+L  +EI  +++G++       EIK   + I+K
Sbjct: 49  IETPVSRRPRLVAYFIMGFLVIAFILSVLGQVEIVATANGKLTLSGRSKEIKPIENSIVK 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G  + +G  LL           D  K     L+  ++  +  +   + + + L 
Sbjct: 109 EIIVKEGESVRKGEVLLKL--TALGAEADTLKTQSSLLQARLEQIRYQILSRSIELNKLP 166

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +     E    +   +     + +     S+       K   +      RL +  + +  
Sbjct: 167 ELKLPDEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTILARINRY 226

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             +    +  L   ++L  K A++++ + +QE    ++  ELR    + + +   I    
Sbjct: 227 ENVSRVEKSRLDDFRSLLHKQAIAKHAVLEQENKYVEAANELRVYKSQLEQIESEILSAK 286

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  L    +  EI   L Q   +      +L   E+ ++   I +P++G +   +  + 
Sbjct: 287 EEYQLVTQLFKNEILDKLRQTTDSIELLTLELEKNEERQQASVIRAPVSGKVQQLKVHTE 346

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP      + A V  K I  +  G  A ++   +   R       ++
Sbjct: 347 GGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVK 406

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I+    +            V ++  DL+  + +I L +G            ++   ++ 
Sbjct: 407 NINLDAIEDQKLGLVFNV-IVSVEENDLSTGNKHIPLSSGMAVTAEIKTGMRSVISYLLS 465

Query: 429 PITDNWP 435
           P+ ++  
Sbjct: 466 PLEESVT 472


>gi|15987897|gb|AAL12771.1| LktD [Mannheimia haemolytica]
          Length = 472

 Score =  238 bits (607), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 66/424 (15%), Positives = 159/424 (37%), Gaps = 15/424 (3%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ ++  I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +      ++ L  +  +        +    +
Sbjct: 118 VEKGQLLVSLTALGSDADIKKTIASLSLAKLESYRYQTLLTAIEKESL---PVIDLSRTE 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D   +       +     ++  +    K    +     +  +              Q+
Sbjct: 175 FKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTIFAYVRKYEGATRIEQE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLE 254
            L   K L+++ ++S+++L  QE  + ++  EL   R  ++E +N L ++ E  +     
Sbjct: 235 KLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNELENDLLNVKEELELITQF 294

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
           F + + E  +   +N+R    E+ K     + ++   I +PI+GT+   +  +       
Sbjct: 295 FKSDVLEKLKQYIENERQLRLELEKNN---QRKQASMIRAPISGTVQQLKIHTVGGVVTT 351

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           ++ LM IVP   +    A V  K I  V  G    ++   +   R       I+ I P  
Sbjct: 352 AETLMIIVPEDDVLEATALVQNKDIGFVAAGQEVIIKVETFPYTRYGYLTGRIKHISPDA 411

Query: 375 SQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            +Q N       +   + I     +      I+L +G            ++   ++ P+ 
Sbjct: 412 IEQPNVGLV---FNATMTIDKKNLTLPDGRKIDLSSGMTITAEIKTGERSVMSYLLSPLE 468

Query: 432 DNWP 435
           ++  
Sbjct: 469 ESVT 472


>gi|294139716|ref|YP_003555694.1| HlyD family secretion protein [Shewanella violacea DSS12]
 gi|293326185|dbj|BAJ00916.1| HlyD family secretion protein [Shewanella violacea DSS12]
          Length = 469

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 67/434 (15%), Positives = 141/434 (32%), Gaps = 7/434 (1%)

Query: 4   FMWKNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                ++   P  L R +    ++ ++  I W+ L  + I  S+ G+I+    V  I+  
Sbjct: 31  PAALEIQETPPNPLARKLGWSLLVLLVIAIIWACLGEVNIVASAEGKIIPSSKVKLIQPL 90

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
              ++K   V  G  + +G  L+  +   TT         + + R  +   ++ L  L  
Sbjct: 91  EKSVVKNILVREGQYVHKGQLLIELDSTLTTADEKRLSGELHSARLSLAGSQALLVMLTQ 150

Query: 123 KYDVLEKAFESRE-EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
             +    A  S     + +          ++            +M  + +      +   
Sbjct: 151 DANDTNIALASLAFPNVPNASQIELDLHKRLLWQQWLQFRAQWQMLQSNLLQKQAEQAAS 210

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
               + L  +L    K    MK L  +N  S+ND    E+   + T +L       K + 
Sbjct: 211 NEVIAKLEQILPIITKRANTMKGLHSQNYASENDYLALEQERIQYTHDLAAERQRLKQLQ 270

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
              +E+  + N   A         + Q Q+  A    +L        ++ + +P++G + 
Sbjct: 271 ASESEVRQQLNTLKAQTSVTELTKIPQIQQQIASLKEELAKAVDRNSKQVLYAPVSGQVQ 330

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +      ++Q LM IVP      +   +  K I  V++   A ++   +   +  
Sbjct: 331 ELSIGTVGGVVTEAQQLMLIVPDEVQLDVEVFLENKDIGFVREQMLAEIKIHTFPFTKYG 390

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKN 419
                +  I         + Q    Y + LK+           I+L  G           
Sbjct: 391 IIDGEVISIS---DDATVDEQRGLIYGMRLKMKQSTIMVDGKEIKLMPGMAVTAEVQTGK 447

Query: 420 TTLAQEIIHPITDN 433
             + +  + P+   
Sbjct: 448 RRIIEFFMAPLLRY 461


>gi|76443872|gb|ABA42643.1| RTX D transport protein [Moraxella bovoculi 237]
          Length = 475

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 68/427 (15%), Positives = 158/427 (37%), Gaps = 8/427 (1%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +S K    + +I ++  + WS +  I+I  ++SG+I +      I+S  + I+K   V +
Sbjct: 53  SSSKWTARIIMIFVLFALLWSWVGQIDIVATASGKISSGSRSKTIQSLETAIVKAVHVRD 112

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  I QG  L+    + +   +   + +++  +      ++ L  LN++ +       ++
Sbjct: 113 GQNIQQGEVLVDLVAVGSDSDVAQSEKALRAAQLSKLRLEAILSALNHRINPKIDLAYAK 172

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
              + +       T ++       +    LK+ L   ++   +    E K   + A+   
Sbjct: 173 SLNISESEINEAQTLAQNQYQAWLAQDEQLKLILKGHQAELQSARSQEQKLVAVGAIERQ 232

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
              D    + L  +N +S++   +QE  +  +  +L+    + + +   I +      L 
Sbjct: 233 KTDDY---RKLKAENFISEHAYLEQESKLLSNQNDLQSTRSQIQKIQAAIMQAEQNRMLY 289

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N  ++    L Q          +    ++ ++  +I SP++GT+    +++     Q 
Sbjct: 290 TQNLKRDTLESLRQTNEQINQYTGQANKAKQRQKLLSIKSPVSGTVQELATYTLGGVVQA 349

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           +Q +M +VP+     +   V  K I  VK G    V+   +   R       I+ I    
Sbjct: 350 AQKIMVVVPNDNQVEVEVLVLNKDIGFVKVGQDVIVKVESFPYTRYGYLTGKIKSISHDA 409

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
               +       Y  ++ +     + +   I L  G             +   ++ P+  
Sbjct: 410 VDHQHLGLV---YTALVSLDKSTLNIDGATINLTPGMNVTAEIKTGKRRVLDYMLSPLQT 466

Query: 433 NWPKIFE 439
              + F 
Sbjct: 467 KVDESFR 473


>gi|189347749|ref|YP_001944278.1| type I secretion membrane fusion protein, HlyD family [Chlorobium
           limicola DSM 245]
 gi|189341896|gb|ACD91299.1| type I secretion membrane fusion protein, HlyD family [Chlorobium
           limicola DSM 245]
          Length = 389

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 71/435 (16%), Positives = 149/435 (34%), Gaps = 58/435 (13%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLI--TWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           M K+L        K   ++   GII  I   W+    IE    ++G ++       I+S 
Sbjct: 1   MLKSLSEIFQRQAKSSLIIIAAGIITFISIIWASFAKIEEVTHTTGLVIASSRNQVIQSA 60

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GII+   V+ G  + +G  L   E  +                               
Sbjct: 61  IDGIIQSIPVQEGQSVQKGMVLANLERTQAEA---------AQYDSFGKVAALEAALARL 111

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             +VL +  E  E   +    ++    ++++    ++                     ++
Sbjct: 112 HAEVLGRPLEFPEN--VRAYPQFIENQTELYQRRKAA---------------------ID 148

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           ++   L+  L   +++L+MM  L E   V + ++ + +R V                   
Sbjct: 149 SEIRTLQESLRLAKEELSMMAPLLESGDVGKIEVIRLQRQVA------------------ 190

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              EL  + N++   + ++  +++ + +   + +   L        +  + +P+ G +  
Sbjct: 191 ---ELTGQINMKRNKFFQDAQQEMTKYEEDLSTQKQLLAERSFVVGKLDVRAPVTGIVKK 247

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +     +    +M+++P      +  K+ P  I  VK G  ATV+   Y       
Sbjct: 248 IHLTTQGAKVRPGDIVMELLPTEGNLIVEGKLKPSDIGFVKPGMAATVKVDAYDYSIYGV 307

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRNGFPAEVLFTAKN 419
               +  I P    +        YY V +K+TD + S + I    L+ G    +     +
Sbjct: 308 LHGKVSYISPDAITEQTPQGEALYYRVHVKLTDESTSQSKISLANLQPGMTVGIDIRTGS 367

Query: 420 TTLAQEIIHPITDNW 434
            T+ Q +  PIT  +
Sbjct: 368 KTVLQYLTKPITKVF 382


>gi|299133995|ref|ZP_07027188.1| type I secretion membrane fusion protein, HlyD family [Afipia sp.
           1NLS2]
 gi|298590742|gb|EFI50944.1| type I secretion membrane fusion protein, HlyD family [Afipia sp.
           1NLS2]
          Length = 431

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 60/431 (13%), Positives = 142/431 (32%), Gaps = 24/431 (5%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            +    I      + W+ L  ++I   + G+++       I+   +G+++   + +GS +
Sbjct: 1   MLGAAIIALFGVALLWASLGTVDIVAVAPGKVIPNGRTKIIQPFEAGVVRAIHIHDGSTV 60

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             G  L+  +       +   ++ +      +   ++AL   +N  D      ++  ++L
Sbjct: 61  KAGDVLIELDPTINAADVKHMEIDLIAAELDVARLRAALANHDNPADSFTPPQDA-TKEL 119

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           ++   +Y  + ++     I+ + R +  K     +I  N   LE    LL       ++ 
Sbjct: 120 VETQRQYLISQTQEHRAKIAEIGRQIAQKRAERDTIAANIAKLEATIPLL-------EER 172

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
             M + L+E    S+     + + +     E       ++     I  L +      A Y
Sbjct: 173 TKMREYLYENKLGSKITYLSELQDLVGQQHETLVQKSREQEADAAIAALDETQTRAKAEY 232

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            + +  DL + ++        +   ++  + + + +PI G +      +       +Q +
Sbjct: 233 RRTLLDDLSKAEQKAGGLRQDVIKAKQKAKLQILTAPIDGVVQQLAVHTIGGVVTPAQSI 292

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII---- 374
             IV       I A V+ + I  V  G TA ++   +   R       I  +        
Sbjct: 293 AVIVATDGGVEIEAMVSNRDIGFVFPGQTAEIKVDTFNFTRYGLLHGHIISVSRDAITPE 352

Query: 375 ----------SQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTL 422
                     S        +  Y   + +        D  I L  G          +  +
Sbjct: 353 KSREQPMQPESPATEPKNQELTYAARIALDRTQMQIDDKLIPLSPGMAVTAEIRTGSRRI 412

Query: 423 AQEIIHPITDN 433
              ++ P+   
Sbjct: 413 ISYLLSPLARY 423


>gi|15987956|gb|AAL12815.1| LktD [Bibersteinia trehalosi]
 gi|15987960|gb|AAL12818.1| LktD [Bibersteinia trehalosi]
 gi|15987968|gb|AAL12824.1| LktD [Bibersteinia trehalosi]
          Length = 472

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 69/429 (16%), Positives = 156/429 (36%), Gaps = 25/429 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +I  I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLIAYLIMLFLIVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +             N +Y  L  A E     
Sbjct: 118 VEKGQLLVSLTALGSDADIKKTMASLSLAKLE-----------NYRYQTLLTAIEKESLP 166

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKS-----SLLR 189
           ++D         S+     I  +         K    +++   R + E ++         
Sbjct: 167 VIDLSRTEFKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTIFAYVRKYE 226

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                 Q+ L   K L+++ ++S+++L  QE  + ++  EL     +   +   +  + +
Sbjct: 227 GATRIEQEKLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNELENDLLNVKE 286

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E  L    +  ++   L+Q+         +L    + ++   I +PI+GT+   +  +  
Sbjct: 287 ELELITQFFKSDVLEKLKQHIENERQLRLELEKNNQRKQASMIRAPISGTVQQLKIHTIG 346

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                ++ LM +VP   +      V  K I  V  G    ++   +   R       I+ 
Sbjct: 347 GVVTTAETLMVMVPEDDVLEASVLVQNKDIGFVTAGQEVVIKVETFPYTRYGYLTGRIKH 406

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEI 426
           I P   +Q N       +   + I     S      IEL +G            ++   +
Sbjct: 407 ISPDAIEQPNVGLV---FNATISIDKKNLSSPDGRTIELGSGMTITAEIKTGERSVMSYL 463

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 464 LSPLEESIT 472


>gi|296273044|ref|YP_003655675.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
 gi|296097218|gb|ADG93168.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
          Length = 388

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 67/434 (15%), Positives = 148/434 (34%), Gaps = 56/434 (12%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N K+   A +  +     + II  + W+ L  I+    + G ++      EI+S   GI+
Sbjct: 5   NTKKPIEAPILIIIGSFFLLIIPFLVWASLTSIDQISHARGNVITTAKTQEIQSALDGIV 64

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           K  +V  G ++ +   L+  ED +     +     +  L+  +   K+ +       D++
Sbjct: 65  KDIKVREGKEVKENDILIELEDSQYKAAYESSYSKVAALKATLARLKAEV----YGQDLV 120

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                 +  +L+    +      K  N                            ++ S 
Sbjct: 121 FPEMVKKYPELIQTQKELFRRRQKAQN----------------------------DEKSA 152

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L   L   +++L ++K L +   V  +++ + +R +     E+                 
Sbjct: 153 LTESLLLSKEELRLIKPLLKTGDVGSSEIIRIKRQIADKEGEI----------------- 195

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                 +   Y ++   ++ +++     +  +L   +   E+ TI + +   +      +
Sbjct: 196 ----INKQNKYFQDSQAEMTKSEEELYSKEQELEDKKINLERTTIKATMDAIVKNIIITT 251

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                +    ++++VP      I  K+ P +I  VK G  A V+   Y       F  ++
Sbjct: 252 RGAKVRPGDVILQLVPMQDKLIIETKLEPSEISFVKIGQKAAVKLDAYDYSIYGIFDGVV 311

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQ 424
             I P    +  N   + Y+ V + +            IEL  G  A+V     N  +  
Sbjct: 312 NYISPDTLVEKTNEGEKYYFRVQIAVDQKELISKHGKKIELTPGMTAQVDIVTGNRKVIT 371

Query: 425 EIIHPITDNWPKIF 438
            +  P+     + F
Sbjct: 372 YLTKPLIKTISQSF 385


>gi|126217844|gb|ABN88624.1| MovD [Moraxella ovis]
          Length = 475

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 68/427 (15%), Positives = 159/427 (37%), Gaps = 8/427 (1%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +S K    + +I ++  + WS +  I+I  ++SG+I +      I+S  + I+K   V +
Sbjct: 53  SSSKWTARIIMIFVLFALLWSWVGQIDIVATASGKISSGSRSKTIQSLETAIVKAVHVRD 112

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  I QG  L+    + +   +   + +++  +      ++ L  LN++ +       ++
Sbjct: 113 GQNIQQGEVLVDLVAVGSDSDVAQSEKALQAAQLSKLRLEAILSALNHRINPKIDLAYAK 172

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
              + +       T ++       +    LK+ L   ++   +    E K   + A+   
Sbjct: 173 SLNISELEINEAQTLAQNQYQAWLAQDEQLKLILKGHQAELQSARSQEQKLVAVGAIERQ 232

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
              D    + L  +N +S++   +QE  +  +  +L+    + + +   I +      L 
Sbjct: 233 KTDDY---RKLKAENFISEHAYLEQESKLLSNQNDLQSTRSQIQKIQAAIMQAEQNRMLY 289

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N  ++    L Q          +    ++ ++  +I SP++GT+    +++     Q 
Sbjct: 290 TQNLKRDTLESLRQTNEQINQYTGQANKAKQRQKLLSIKSPVSGTVQELATYTLGGVVQA 349

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           +Q +M +VP+     +   V  K I  VK G    V+   +   R       I+ I    
Sbjct: 350 AQKIMVVVPNDNQVEVEVLVLNKDIGFVKVGQDVIVKVESFPYTRYGYLTGKIKSISHDA 409

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            +  +       Y  ++ +     + +   I L  G             +   ++ P+  
Sbjct: 410 VEHQHLGLV---YTALVSLDKSTLNIDGATINLTPGMNVTAEIKTGKRRVLDYMLSPLQT 466

Query: 433 NWPKIFE 439
              + F 
Sbjct: 467 KVDESFR 473


>gi|7416118|dbj|BAA93710.1| hemolysin D [Escherichia coli]
          Length = 479

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 67/433 (15%), Positives = 153/433 (35%), Gaps = 6/433 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++         +    ++ +I  +  S+L  +E+   ++G+  +     EIK   + I++
Sbjct: 49  IETPVSRRSHFVIWSILLFVIISLLLSVLGKVEVVSVANGKFTHSGRSKEIKPIENAIVE 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K  V++G+ + +  PL+          I   + S+   +       + L     + ++ E
Sbjct: 109 KIMVKDGAFVKKNDPLVELTVPGVESDILKSEASLLYEKTE-QYRYAILSESIQRNELPE 167

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                      +  G++    S +      +       K   +    + R     + SL 
Sbjct: 168 IRITDFPGGEDNAGGEHFQRVSSLIKEQFMTWQNRKNQKQLTLNKKIVERDAALARVSLY 227

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +S   + L   K L  K AVSQ+ + +QE    ++  E    + +   + + I  + 
Sbjct: 228 EHQVSQEGRKLNDFKYLLNKKAVSQHSVMEQENSYIQAKNEHAVWLAQVSQLEKEIELVR 287

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  LE   +  EI     ++         +L    + +    I +P++GT+      + 
Sbjct: 288 EELALETNIFRSEIIEKHRKSTDNIVLLEHELEKNRQRKASSFIKAPVSGTVQELNIHTE 347

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP + +  + A V  K I  ++ G    ++   Y   R       ++
Sbjct: 348 GGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQPGQEVVIKVDAYPYTRHGYLTGKVK 407

Query: 369 KIDPIISQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            I        +       + VI+ +   D+      I +  G            ++   +
Sbjct: 408 NITADSVSVPDTGLV---FNVIISVDRNDIQGERKKIPVTAGMTVMAEIKTGVRSVISYL 464

Query: 427 IHPITDNWPKIFE 439
           + P+ +   + F 
Sbjct: 465 LSPLKETINESFR 477


>gi|37527014|ref|NP_930358.1| hypothetical protein plu3126 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786447|emb|CAE15500.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 462

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 61/436 (13%), Positives = 152/436 (34%), Gaps = 12/436 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKS 61
              +  +    PA   R T +++   + ++  WSI+  ++I  +++G +L   +   I+S
Sbjct: 34  QPGYLEIVERPPAPWARCTAMALTLFLLVVLLWSIIGHLDIHANATGRLLVSSHSKVIQS 93

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             +G I    V +G ++  G  L+    I     +   +  +   R  +   ++ L    
Sbjct: 94  LEAGEIVAIHVRDGQRVKTGDVLIKLNPIGVEAELKELQEQLNFKRLEMARLQALLTDTP 153

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            ++  +++     + +L            +        V  +L+   + M     ++   
Sbjct: 154 IEHFSVQEGMPQAQVELA----------REHLVSIWKEVVANLESLDSEMSVNQASQSAR 203

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
               + L  L+++ +  L   + L     + + +L +QE+   +    L +   E   + 
Sbjct: 204 NADITALEKLMTNIKVRLEARRTLAASKLLPKVELLEQEKEKLEIERTLSQQHAELAVLK 263

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                L +      A   +E    L + Q   A    +L    + R  +++ +P+ G + 
Sbjct: 264 EQYQVLKESRERYLAKTRREYYDQLNETQTAIAVMTQQLIKAGERRRLQSLRTPVDGVVQ 323

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +     Q +Q LM IVP          V  K +  V  G    ++   +   R  
Sbjct: 324 QLAIHTLGGVVQSAQQLMVIVPDDTPLEAEVMVLNKDVGFVHAGQPVEIKVDAFPYTRYG 383

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             +  +  I     + +         ++ ++ + +A   + + L+ G          +  
Sbjct: 384 TIRGKVAHISKDAVKDEQLGLVFP-AQIQMERSSIAVDQHEVPLQAGMSITAEIRTGDRR 442

Query: 422 LAQEIIHPITDNWPKI 437
           +   ++ P+     + 
Sbjct: 443 VIDYLLSPLQQYQSEA 458


>gi|242279680|ref|YP_002991809.1| secretion protein HlyD family protein [Desulfovibrio salexigens DSM
           2638]
 gi|242122574|gb|ACS80270.1| secretion protein HlyD family protein [Desulfovibrio salexigens DSM
           2638]
          Length = 430

 Score =  237 bits (605), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 76/419 (18%), Positives = 151/419 (36%), Gaps = 17/419 (4%)

Query: 20  MTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           + LL I+G  I  + W+    IE +V + G +        +     G+++K  VE G  +
Sbjct: 21  IVLLLILGFTIVFMLWAHSSKIEKTVRAQGVVETNLTDKIVGHFEGGVVEKVFVEEGDTV 80

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  ++   +   T+  +   + +K L+  ++   +  +   +++       E R E  
Sbjct: 81  RKGQEIVAIANTNITEKRNKSLIKMKRLQAKLNRLMAESNNNTDEFSHKASTPEERSEIQ 140

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              +                ++   + +  T+++         E     L       ++ 
Sbjct: 141 FARIRG-------------DALKEKINILKTQIQQSRAALSASEKHVQNLLDEQKVLKEQ 187

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
             M++ + +K   S+  L Q++  + K T  + E  +++      I EL    N E  ++
Sbjct: 188 HDMLEPMVKKGIGSRQLLLQRKTELAKITTNIAEIYNKRDEYSLEIRELEQRINQEELDF 247

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            ++I  ++            +L    +   +  I SPI GTI    + +     +  + L
Sbjct: 248 YRDIREEINLVSSELKGVREELNAANEQIVRSVIRSPIDGTIYKLSANTVGGIVRSGEAL 307

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            +IVP      I  KV P     +  G TA +R   Y    +   KA I  I        
Sbjct: 308 AEIVPLDATIRIEGKVQPSDRTKIWNGMTAKIRPSSYEFSDQTMLKAKIVNISAKTY--F 365

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           ++L    YY VI              L  G   EV   +   ++ + ++ PIT      
Sbjct: 366 DDLTRTWYYRVIFNTIKEDAEKVKEFL-PGMIVEVNILSGEESVLEYLLSPITRGMRGA 423


>gi|224612962|emb|CAQ77253.1| HlyD protein [Escherichia coli]
 gi|323944001|gb|EGB40085.1| HlyD type I secretion membrane fusion protein [Escherichia coli
           H120]
          Length = 478

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 67/429 (15%), Positives = 154/429 (35%), Gaps = 7/429 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++       + +    +  ++     S+L  +EI  +++G++ +     EIK   + I+K
Sbjct: 49  IETPVSRRPRLVAYFIMGFLVIAFILSVLGQVEIVATANGKLTHSGRSKEIKPIENSIVK 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G  + +G  LL           D  K     L+  ++  +  +   + + + L 
Sbjct: 109 EIIVKEGESVRKGDVLLKL--TALGAEADTLKTQSLLLQARLEQTRYQILSRSIELNKLP 166

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +     E    +   +     + +     S+       K   +      RL +  + +  
Sbjct: 167 ELKLPDEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTVLARINRY 226

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             L    +  L    +L  K A++++ + +QE    ++  ELR    + + +   I    
Sbjct: 227 ENLSRVEKSRLDDFSSLLHKQAIAKHAVLEQENKYVEAVNELRVYKSQLEQIESEILSAK 286

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  L    +  EI   L Q          +L   E+ ++   I +P++G +   +  + 
Sbjct: 287 EEYQLVTQLFKNEILDKLRQTTDNIGLLTLELAKNEERQQASVIRAPVSGKVQQLKVHTE 346

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP      + A V  K I  +  G  A ++   +   R       ++
Sbjct: 347 GGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVK 406

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            I+    +          + VI+ I +      + NI L +G            ++   +
Sbjct: 407 NINLDAIEDQRLGLV---FNVIISIEENGLSTGNKNIPLSSGMAVTAEIKTGMRSVISYL 463

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 464 LSPLEESVT 472


>gi|296283660|ref|ZP_06861658.1| type I secretion membrane fusion protein, HlyD family
           [Citromicrobium bathyomarinum JL354]
          Length = 479

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 71/438 (16%), Positives = 151/438 (34%), Gaps = 22/438 (5%)

Query: 9   LKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           ++R  P     + L+ I+   +  +TW+ +  ++ +V ++G ++    +  + +   GI+
Sbjct: 56  IERFRPGGAANLLLVMILLFTVAAVTWAAVTELDRTVRATGRVIPLGRLQVVSNQEGGIV 115

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
            +  VE G  + +G P++  +  E    +  K+ ++  L      ++ E +    +    
Sbjct: 116 SEILVETGDLVDKGQPMVLLDLTEAGSDLQSKQATLDALNAKIARLEAEIAGRRPVYPVA 175

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D  E A + R EQ              +    ++ +  +  +   R+     +    E  
Sbjct: 176 DNPETAAQIRIEQ-------------SLHAARLAELADAESVARARIGQAQRSVTQAEAA 222

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  R      + +   +  L  K    +    Q E     +  E  + +         +
Sbjct: 223 LAGRRTAAQLARSEADTIAGLVAKGIEPRLAGQQAEAQASMAQSEAEQALAAVTQARDAV 282

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E          ++  +   +L   Q   A     +  L    E+ TI SP+ G +    
Sbjct: 283 SEARAGLTQVRNSWRAQAGDELATAQAELASRQEVMPALVARVERSTITSPVRGRVNRVL 342

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +          ++++V  S+   I A V P+ I  V+ G  AT+    Y         
Sbjct: 343 VTTIGAAVAPGAEIVEVVASSEQLAIEASVAPQDIASVRLGQRATIDISAYDSAVYGSIH 402

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTT 421
             +  I P  +   N    + +Y V L+       +       L  G  A V       +
Sbjct: 403 GEVISISPDAT--VNERTGESFYAVQLRADLDELREKTGREQPLTAGMTASVNLLGDKRS 460

Query: 422 LAQEIIHPITDNWPKIFE 439
           +   I+ PIT    + F 
Sbjct: 461 VLSYILTPITRLRDRAFR 478


>gi|254512710|ref|ZP_05124776.1| type I secretion membrane fusion protein, HlyD [Rhodobacteraceae
           bacterium KLH11]
 gi|221532709|gb|EEE35704.1| type I secretion membrane fusion protein, HlyD [Rhodobacteraceae
           bacterium KLH11]
          Length = 436

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 62/437 (14%), Positives = 141/437 (32%), Gaps = 13/437 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             + + ++   P     + LL +  +   + W+    ++  V   G I+   ++  I++ 
Sbjct: 8   ERLAREMRGKAPIRGSLLLLLILGCLASAVFWAHFTELDDVVRVDGRIVPSGDIQVIEAT 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G+++   V  G  +  GT L+  +  +    +  ++     L       ++ +D    
Sbjct: 68  EPGVLQSLHVREGLVVEAGTLLMELDTNQIERELSQEQQRAYGLMARAQRLQAEIDGAEL 127

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           ++D +          LL        + + ++    + +   + +   +         +  
Sbjct: 128 RFDDI----------LLQGAPGVVRSETALYQGRQAELASEIAILNRQREQRQREYEEGL 177

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                    L    ++ TMM  L E+       L    R   +              +  
Sbjct: 178 VDQVTTAETLKVLAEERTMMAPLVEQRMEPMTTLLALRRSEAEWQGRKVRAEAVVNRLKA 237

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + E+ D+     + +      DL       A     L  L     +  I +P+ G +  
Sbjct: 238 GLEEVDDKVRATRSRFRSAALTDLALVTAELAALQPALPALRDRASRAQIRAPVRGVVNR 297

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +    A+  + L++IVP      + A V PK I  +  G    ++   Y   R   
Sbjct: 298 IHRTTIGGLARSGEDLIEIVPLDDRLLVEAYVRPKDIAFLHAGQQVKIKITAYDFSRYGS 357

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNT 420
               I +I      +    + + +  V ++ +D       I  E+  G  AEV   +   
Sbjct: 358 LDGEIIRIGADTITRSERSEEEVF-VVEIQTSDTMLDAGGIAVEIIPGMVAEVDILSGRK 416

Query: 421 TLAQEIIHPITDNWPKI 437
           ++   +I P+       
Sbjct: 417 SVLDYLIQPVLKVKEHA 433


>gi|332347851|gb|AEE60092.1| hemolysin secretion protein HlyD [Escherichia coli UMNK88]
          Length = 478

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 67/429 (15%), Positives = 154/429 (35%), Gaps = 7/429 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++       + +    +  ++     S+L  +EI  +++G++ +     EIK   + I+K
Sbjct: 49  IETPVSRRPRLVAYFIMGFLVIAFILSVLGQVEIVATANGKLTHSGRSKEIKPIENSIVK 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G  + +G  LL           D  K     L+  ++  +  +   + + + L 
Sbjct: 109 EIIVKEGESVRKGDVLLKL--TALGAEADTLKTQSSLLQARLEQIRYQILSRSIELNKLP 166

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +     E    +   +     + +     S+       K   +      RL +  + +  
Sbjct: 167 ELKLPDEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTVLARINRY 226

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             L    +  L    +L  K A++++ + +QE    ++  ELR    + + +   I    
Sbjct: 227 ENLSRVEKSRLDDFSSLLHKQAIAKHAVLEQENKYVEAVNELRVYKSQLEQIESEILSAK 286

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  L    +  EI   L Q          +L   E+ ++   I +P++G +   +  + 
Sbjct: 287 EEYQLVTQLFKNEILDKLRQTTDNIGLLTLELAKNEERQQASVIRAPVSGKVQQLKVHTE 346

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP      + A V  K I  +  G  A ++   +   R       ++
Sbjct: 347 GGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVK 406

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            I+    +          + VI+ I +      + NI L +G            ++   +
Sbjct: 407 NINLDAIEDQRLGLV---FNVIISIEENGLSTGNKNIPLSSGMAVTAEIKTGMRSVISYL 463

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 464 LSPLEESVT 472


>gi|253990552|ref|YP_003041908.1| RTX toxin ABC transporter protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638877|emb|CAR67492.1| RTX toxin ABC transporter protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782002|emb|CAQ85166.1| RTX toxin ABC transporter protein [Photorhabdus asymbiotica]
          Length = 451

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 67/431 (15%), Positives = 159/431 (36%), Gaps = 12/431 (2%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L +  P+   R T + + + II  + W+ L  +++  +++G ++       I++     
Sbjct: 28  ALSQRPPSPFARYTAIMLSVSIIIALLWAYLGKLDVQATATGRLIVSGRSQIIQAYEQSR 87

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+NG ++++  PLLT + +     I      I+         ++  +    +   
Sbjct: 88  VTAIHVQNGQRVIKDDPLLTLDTLGVNQDIAKLFKQIEYQTHEKIRYQALTE---KQEPA 144

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +  F++        + + +S   + +  GI+++   + + L   ++        ++  +
Sbjct: 145 EQGLFQTLPASQQAQVVENYSREKREYEAGITNLKAEMNVNLASQQAR-------KSDIN 197

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L  L  +  + L   + L EK  +S+ +  +QE+   ++   + +   E   +      
Sbjct: 198 ALTKLRQNISQRLKARQTLSEKQVISKVEYLEQEKEFLETERLIAQQNSELHVLQSQYIN 257

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L +  N   A   +E     +Q++         L+  +   + + I SP+ GT+      
Sbjct: 258 LEERLNGLKAQKEREWFDKRKQSEVQLVVSEQDLSKAQAREQLEIIRSPVTGTVQQLSVH 317

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q +Q LM IVP   +     ++  K    V  G   TV+   +   R       
Sbjct: 318 TLGAVLQPAQNLMVIVPDDNVQLAEVQILNKDAGFVHPGQQVTVKVDAFPYTRYGTIDGE 377

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  I    +  +         +V LK   +A  +  +E+  G             +   +
Sbjct: 378 LLNISRDSTTDEQLGLVFP-AQVSLKSNHIAIDNTKVEITPGMSIVAEIKTDQRRVIDYL 436

Query: 427 IHPITDNWPKI 437
           + PI +   + 
Sbjct: 437 LSPIREYQSEA 447


>gi|1708225|sp|P55125|HLYD_PASSP RecName: Full=Leukotoxin secretion protein D
 gi|457620|gb|AAA16446.1| PllktD [Mannheimia cf. haemolytica]
 gi|1581690|prf||2117209D leukotoxin secretion protein
          Length = 478

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 70/429 (16%), Positives = 156/429 (36%), Gaps = 25/429 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLIAYLIMLFLAVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENTIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +             N +Y  L  A E     
Sbjct: 118 VEKGQLLVSLTALGSDADIKKTITSLSLAKLE-----------NYRYQTLLTAIEKESLP 166

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKS-----SLLR 189
           ++D         S+     I  +         K    +++   R D E ++         
Sbjct: 167 VIDLSNTEFKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKDAEKQTISAYVRKYE 226

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                 Q+ L   + L+++ ++S+++L  QE    ++  EL     +   +   +  + +
Sbjct: 227 GATRIEQEKLKDFRKLYQQKSLSKHELLSQENKAIEAQNELAVYRSKLNELESDLLNVKE 286

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E  L    +  ++   L+Q+         +L    + R+   I +P++GT+   +  +  
Sbjct: 287 ELELITQFFKSDVLEKLKQHIENERQLQLELEKNNQRRQASMIRAPVSGTVQQLKIHTIG 346

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                ++ LM IVP   +    A +  K I  V  G    ++   +   R       I+ 
Sbjct: 347 GVVTTAETLMIIVPEDDVLEATALIQNKDIGFVAAGQEVIIKVETFPYTRYGYITGRIKH 406

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEI 426
           I P   +Q N       +   + I   A S    + IEL  G            ++   +
Sbjct: 407 ISPDAIEQPNLGLV---FNATVSIDKQALSSPDGHKIELGLGMTITAEIKTGERSVMSYL 463

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 464 LSPLEESVT 472


>gi|258544118|ref|ZP_05704352.1| RTX toxin transporter [Cardiobacterium hominis ATCC 15826]
 gi|258520626|gb|EEV89485.1| RTX toxin transporter [Cardiobacterium hominis ATCC 15826]
          Length = 477

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 60/422 (14%), Positives = 148/422 (35%), Gaps = 15/422 (3%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P       L+ +  ++ L  W+    ++I   + G+         I+   +  +K   V 
Sbjct: 55  PLPKWTARLIMLFAVLAL-VWAWFGQLDIVAVAQGKTEPGGQSKVIQPLETAEVKVIHVR 113

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKA 130
           +G  +  G  LL    + +   +   + ++   +      +   +ALD           A
Sbjct: 114 DGQHVEAGETLLELRAVGSDADVTQSEKALHAAQLAKWRNEALLAALDHNRPPQMNKAAA 173

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            ++  E+      +       + +    +     +    R+R        +  +   L  
Sbjct: 174 LQAGIEEADFLQAQL------LVSNQYQAWAAQDQQIGARIRQHEAESRVVNAEIDKLTN 227

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
           L S   K  + +  L ++N +S +   +Q+  + ++  +L+   ++++ +   I+E  D 
Sbjct: 228 LGSIESKRTSDLNKLVKQNFISNHAYLEQKSKLIENQNDLKSKRNQREQIKAAIDEAKDS 287

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
             +      ++    L Q     A   ++L   ++ +    + +P++GT+    + +   
Sbjct: 288 RAVNTQTIRRDTLDALRQADEQSAQLRAQLDKAQQRQRLMRLAAPVSGTVQQLATHTIGG 347

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
               +QPL+ IVP      ++A +  K I  V++G  A ++   +   R       ++ I
Sbjct: 348 VVTAAQPLLVIVPDDYQLNVKALILNKDIGFVRQGQEAVIKIEAFPYTRYGYLTGKVQTI 407

Query: 371 DPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                +   N Q    Y   + +    L      + L  G             +   ++ 
Sbjct: 408 SYDAIE---NEQLGLVYAATIALDHDTLNIEGQPVRLSAGMNITAEIKTGKRRVLDYLLS 464

Query: 429 PI 430
           P+
Sbjct: 465 PL 466


>gi|66046306|ref|YP_236147.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae B728a]
 gi|63257013|gb|AAY38109.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. syringae B728a]
          Length = 473

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 66/430 (15%), Positives = 146/430 (33%), Gaps = 7/430 (1%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K +HPA  +      +      + W+ L  I++  ++SG+I+       I+S  + ++K 
Sbjct: 49  KPSHPAP-RVFMWAIMFFAALALLWACLGKIDVVATASGKIIPSGKTKTIQSSETAVVKA 107

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V +G  +  G  LL  +       +   +  +   R       + LD +N +     K
Sbjct: 108 IHVRDGQSVKAGQLLLELDSTSADADVGRVRSDLLAARIDSARAAAMLDAINQR-----K 162

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                   +LD    +     +           SL +    ++    +      +   L+
Sbjct: 163 PPRDLTGTILDADPMHVLAAERWLQGQYQEYRSSLDLVDAEIQQRQADIQAARIQVMSLQ 222

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L    K  +  +NL +K  ++++   ++E+       +L               E   
Sbjct: 223 KTLPIATKLASDYENLLKKQYIARHAYLEKEQARLDLERQLSVQQASVLQSTAARQEAER 282

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                 A   + +   L+Q  +  A     LT      +  T+ +P+ GT+      +  
Sbjct: 283 RREGVVAQTRRAMLDLLQQADQKIASFNQDLTKARYQEDLTTLEAPVDGTVQQLAVHTVG 342

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                +QPLM +VP  +   + A +  K +  V+ G   TV+   +   +    +  +  
Sbjct: 343 GVVTPAQPLMVLVPDGQPVEVEAMLENKDVGFVRAGQAVTVKVETFTFTKYGTIEGEVIS 402

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           +     + +         ++ L    L  +  +I+L  G       T     + +  + P
Sbjct: 403 VSNDAIEDEKRGLIYSS-KIRLNSDTLNVNGVDIKLSPGMAVTAEVTTNKRRVIEYFLSP 461

Query: 430 ITDNWPKIFE 439
           +  +  + F 
Sbjct: 462 LQQHASESFR 471


>gi|307947283|ref|ZP_07662617.1| putative toxin secretion transmembrane protein [Roseibium sp.
           TrichSKD4]
 gi|307769425|gb|EFO28652.1| putative toxin secretion transmembrane protein [Roseibium sp.
           TrichSKD4]
          Length = 441

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 70/432 (16%), Positives = 151/432 (34%), Gaps = 8/432 (1%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R    +L      +I   + ++  + +  +E+     G+I+    V  ++  F G I + 
Sbjct: 9   RITSPTLHVTIWFTISVFMAIVVMACIFQVEVVARGQGKIVPVSRVQVVQPEFDGKITQI 68

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVL 127
            V NGS++ +G  L+  +  +    ++     I  L   R  I    S +D  N + +  
Sbjct: 69  HVRNGSKVNKGDVLIELDTTDAKADLNTISAEITRLQIERARIMALVSGIDVNNIQTETF 128

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            KA  S   Q      +++    ++    + ++  ++     R+ S   + L  E     
Sbjct: 129 SKAVLSSFSQNTKTDDEFYKEQYRLLLAEVDNLQAAISQITARIISNNQSVLVTEANIER 188

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           + A LS   + L M + L ++   S++     +        E    + E           
Sbjct: 189 IEAALSIQSERLEMAQGLLDRGTSSRSTFLDVQEAFTAFEKEREVYLRELDEKRSQETAY 248

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E          ++ +   + +   A    +    ++      + +P+ G +   + F+
Sbjct: 249 QAEQRSLITTQRNKLLQRRLEIEARLATLEEQYRTADRRVVAAQLTAPMNGVVDQLEVFT 308

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
               A+  + L+++VP  +   I A  T   I  V+ G  A + F  Y   R    K ++
Sbjct: 309 IGAVAKGGEQLLRVVPEEQNVEIEAIFTNTDIGFVEIGQQANINFDAYPSARFGFVKGLV 368

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
             +    ++ ++       +EV +   +  L        +R G  A V  T     +   
Sbjct: 369 TDVAADSTEDND---GNWVFEVRVTPAENKLTEGQQEFAIRPGMTAVVDITTDKRRIISY 425

Query: 426 IIHPITDNWPKI 437
              PI +     
Sbjct: 426 FFEPILEKIQSA 437


>gi|71276188|ref|ZP_00652467.1| Type I secretion membrane fusion protein, HlyD [Xylella fastidiosa
           Dixon]
 gi|71901207|ref|ZP_00683309.1| Type I secretion membrane fusion protein, HlyD [Xylella fastidiosa
           Ann-1]
 gi|170730675|ref|YP_001776108.1| hemolysin secretion protein D [Xylella fastidiosa M12]
 gi|71162949|gb|EAO12672.1| Type I secretion membrane fusion protein, HlyD [Xylella fastidiosa
           Dixon]
 gi|71729018|gb|EAO31147.1| Type I secretion membrane fusion protein, HlyD [Xylella fastidiosa
           Ann-1]
 gi|167965468|gb|ACA12478.1| hemolysin secretion protein D [Xylella fastidiosa M12]
          Length = 473

 Score =  236 bits (603), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 53/424 (12%), Positives = 142/424 (33%), Gaps = 9/424 (2%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P +L  M ++    I+ L+ W+    IEI   + G+I+ +     ++   + ++++  V 
Sbjct: 55  PTALWSMRIIIACFIVALL-WACFGKIEIVAVAPGKIVVDSRTKVLQPLETAVVRRILVR 113

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +G ++     L+  +   T       + ++ N        ++    L            +
Sbjct: 114 DGEKVKAHQALIELDATATGAEYAQAEDALLNATLTALRLRALSTALERGQTPQLTHSAT 173

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                +        +    +     ++  ++  +   +R+       L   + + +   +
Sbjct: 174 IPADRIAAEQALTLSQFNAYQAKRHNLQATIAQRRAELRTAQDTIEPLTESARISKMRSA 233

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
            +         L +   V ++D   +E+    +  +L    +  + +   ++   +E ++
Sbjct: 234 DYAI-------LLKDQYVGRHDYLLREQERITAERDLATQRNRIQEIRSALSAAQEELSV 286

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A++ ++   DL +          +L   ++     T+ SP+ G +      +      
Sbjct: 287 LQADFRQQTLDDLRKADEQIGQLTPQLAKAKQRNRLMTLRSPVEGIVQQLAIHTVGGVVT 346

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            +Q L+ +VP  +   + A V  K I  ++     TV+   +   R       +  I   
Sbjct: 347 PAQQLLAVVPVQETLEVEATVLNKDIGFLRPEQHVTVKIESFPYTRYGYLTGKVVSISHD 406

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
            +Q +          + L  T L      I +  G            T+   ++ P+   
Sbjct: 407 AAQDEKLGLVFPV-RIRLDNTTLTIDGTQIRMSAGMALSAEIKTGKRTVIDYLLSPLKQY 465

Query: 434 WPKI 437
             + 
Sbjct: 466 TDEA 469


>gi|117956041|gb|ABK58603.1| RtxD [Kingella kingae]
          Length = 475

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 64/440 (14%), Positives = 149/440 (33%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  + +      P    R+ +L  +     + WS    I+I  ++SG+  +      I+ 
Sbjct: 43  HLELTETPLSAAPKVAARLIMLFTVL---ALVWSWFGHIDIVATASGKTSSGSRSKIIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  +     LL  E + T   +   + +++  +      +S L+ L 
Sbjct: 100 LETAVVKAVHVRDGQHVQANETLLELEAVGTDSDVAQSEQALQAAQLSKLRYESVLNALQ 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                     +    +              +      +     +   + +R         
Sbjct: 160 THT---APRMDWATAKTFHISETDFQAAQILAQNQYQAWAAQDEQLQSVLRGHQAELRSA 216

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
             +   L ++ +  Q+     + L  +N +S++   +QE     +  +LR    + + + 
Sbjct: 217 RAQEQKLVSVGAIEQQKTADYQKLKAENFISEHTYLEQESKSVSNQNDLRSTRGQIQQIQ 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +      L   N  ++    L Q         S+    ++ ++  T+ SP+ GT+ 
Sbjct: 277 AAIAQAEQNRTLNTQNLKRDTLDALRQANEQIDQYRSQTDKAKQRKQLMTLQSPVNGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +++     Q +Q +M +VP  +   + A V  K I  V++G  A ++   +   R  
Sbjct: 337 ELATYTIGGVVQAAQKIMVVVPDDEKMEVEALVLNKDIGFVEQGQDAVIKIESFPYTRYG 396

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
                ++ I    +  +   Q    Y  I+ +    L      + L  G           
Sbjct: 397 YLTGKVKSISHDATTHE---QLGLVYTAIVSLDKNHLNIDGKTVNLTAGMNVSAEIKTGK 453

Query: 420 TTLAQEIIHPITDNWPKIFE 439
             +   ++ P+     + F 
Sbjct: 454 RRVLDYLLSPLQTKIDESFR 473


>gi|313682324|ref|YP_004060062.1| type i secretion membrane fusion protein, hlyd family
           [Sulfuricurvum kujiense DSM 16994]
 gi|313155184|gb|ADR33862.1| type I secretion membrane fusion protein, HlyD family
           [Sulfuricurvum kujiense DSM 16994]
          Length = 437

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 61/431 (14%), Positives = 158/431 (36%), Gaps = 20/431 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++    + L R  L S+   + + + W  L  I++ VS+ G+++ +  +  ++   +G+
Sbjct: 18  EIEERPTSPLGRSLLWSLFAFLTISLLWLFLAKIDVVVSARGKVVPDGEIKTLQPVETGV 77

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V+ G  + +G  L+  +   T   +  K+ ++  L   I+   + ++        
Sbjct: 78  IGSILVKEGQSVKKGEVLMEIDPSVTQSDLASKQKNLTLLELEIERLDAQINDRAFHPSR 137

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             +   +   Q +            ++  G  +  +  ++   ++R         +   S
Sbjct: 138 KCQESTAIATQQM------------MYTSGKLAYDQQRQVLQEQIRQNDEATEAAKADKS 185

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L+ LL+S ++    +K + +   +++ +    +    +   +L    H        +NE
Sbjct: 186 RLKQLLTSAKEHEARLKEVLD--IIAKKEYIDAQNQRIEYQEQLTMKEHAIAQSQGKLNE 243

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +  L    Y  ++  DL Q  +      +++   +    ++ I++P+ GTI      
Sbjct: 244 LNQQLRLVTQEYRNKLLADLTQKSKEATSLRTEVETTQFRNAKQQIIAPVDGTIGKLLVH 303

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       ++ L+ ++P      I+A V  + I  V K   A V+   +   +       
Sbjct: 304 TVGGVVTPAEKLLTVIPKGVPLIIKATVLNQDIGFVTKEMEAAVKIDTFDFQKYGLIHGE 363

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQ 424
           ++ I        ++ +    YE+ +  + L        + +  G             + +
Sbjct: 364 VKHI---ADDAIDDEKLGPVYEIAIAPSSLTLKGEGKTLSIHPGMSVTAELKVGKRRVIE 420

Query: 425 EIIHPITDNWP 435
             I+P+     
Sbjct: 421 FFIYPMIKYLD 431


>gi|332161832|ref|YP_004298409.1| hemolysin transport protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666062|gb|ADZ42706.1| hemolysin transport protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 464

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 61/429 (14%), Positives = 146/429 (34%), Gaps = 11/429 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R      + ++ ++ WSI   ++I  S++G+++  ++   I+S   G++ 
Sbjct: 43  VERPVAPLARRTAWFLALTLLLVLVWSIAGRLDIHASANGKVIVAEHSKIIQSLEPGVVV 102

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +G +++ G  LL    I     ++     + +    ++  + +    ++      
Sbjct: 103 AINVHDGDRVVAGQVLLELNPIGVDAEVNNINQQLMHR--SLEAARMSALLTDDPLAHFI 160

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               S E  ++        T   +       V   L  + +                +  
Sbjct: 161 YPDNSPENLVM--------TAKSLLTKEYDEVNAELARQDSERAVNQAYIQAGNANITHH 212

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +AL+ +  + L  ++ L +  A+++ ++  QER    ++ E      EQ  +   +  L 
Sbjct: 213 KALMKNIHQRLQALQTLVKSKAIAEAEVLIQEREWLNASAEGNRLESEQAVLRAKMRNLA 272

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A   +     L +          +L  L + + Q+++ +P+ G I  +   + 
Sbjct: 273 QVRLHYLAEKKRSYQEQLNKAHEVINQLKQELVKLMEKQRQQSLRAPVDGVIQQSTVHTL 332

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP S    +   +  K I  V  G +  V+   +   R       ++
Sbjct: 333 GGVVTSAQPLMVLVPESHQLELDVMILNKDIGFVLPGQSVEVKVDSFPYTRFGTLSGEVK 392

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I     +            + L    L      + L  G             +   ++ 
Sbjct: 393 HISRDAMEDQQQGLVFP-ARIRLNSDTLIVEGKPVRLSAGMAVSAEIKTGRRRVIDYLLS 451

Query: 429 PITDNWPKI 437
           P+     + 
Sbjct: 452 PLQQYQSEA 460


>gi|58697519|ref|ZP_00372776.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58536014|gb|EAL59706.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Drosophila simulans]
          Length = 372

 Score =  236 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 68/380 (17%), Positives = 135/380 (35%), Gaps = 31/380 (8%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +  PL+   D+     + + K  + +        ++ L  +    D LE + E ++   
Sbjct: 1   KKDEPLVLLSDVNEKANLSIIKEKLLSFLA----TEARLLAIRVDLDTLEFSDEVKKLSN 56

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            + + K      K+FN    S+     +   R++ +      L  + +          ++
Sbjct: 57  DELVNKVIKNQVKLFNSQRKSILGKTDILQQRIKQLNDELAGLNFQLNAAHKQYDLITEE 116

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L   + L +   +S+  +   E+       E+   +   ++ +  + +   E  LE  N 
Sbjct: 117 LETKRQLLDSGHISKPHILALEKQF----AEIEGRVGHYRSAISQVQQKIGENELEIINV 172

Query: 259 LKE----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             +     + +L++   + AD   +L + E +  +  I SP  G +   +  +     Q 
Sbjct: 173 KNDSQERANAELKEVSTSIADLKERLMVAEDSLARTIIKSPQDGIVTDIRYHTEGGVIQS 232

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPHYADIR 359
             P+M +VP      I AK+  + I+ V                +G    VR   Y+  R
Sbjct: 233 GVPIMSVVPSDDDLIIDAKIQTRNIEEVLSAQKKDSNIVSIDGLEGLKVKVRLSAYSARR 292

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
                 I+  I P         +   YY V + I     +   N+ L  G PAEV    +
Sbjct: 293 LSLISGIVSHISPDALDD---PRLGRYYSVRVVIPKSELAQFKNVYLYPGMPAEVYIVTQ 349

Query: 419 NTTLAQEIIHPITDNWPKIF 438
           + TL   +  PI     + F
Sbjct: 350 SRTLLSFLFTPIIATVDRSF 369


>gi|332968117|gb|EGK07202.1| HlyD family type I secretion membrane fusion protein [Kingella
           kingae ATCC 23330]
          Length = 475

 Score =  236 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 64/440 (14%), Positives = 149/440 (33%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  + +      P    R+ +L  +     + WS    I+I  ++SG+  +      I+ 
Sbjct: 43  HLELTETPLSAAPKVAARLIMLFTVL---ALVWSWFGHIDIVATASGKTSSGSRSKIIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  +     LL  E + T   +   + +++  +      +S L+ L 
Sbjct: 100 LETAVVKAVHVRDGQHVQANETLLELEAVGTDSDVAQSEQALQAAQLSKLRYESVLNALQ 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                     +    +              +      +     +   + +R         
Sbjct: 160 THT---APRMDWATAKTFHISETDFQAAQILAQNQYQAWAAQDEQLQSVLRGHQAELQSA 216

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
             +   L ++ +  Q+     + L  +N +S++   +QE     +  +LR    + + + 
Sbjct: 217 RAQEQKLVSVGAIEQQKTADYQKLKAENFISEHTYLEQESKSVSNQNDLRSTRGQIQQIQ 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +      L   N  ++    L Q         S+    ++ ++  T+ SP+ GT+ 
Sbjct: 277 AAIAQAEQNRTLNTQNLKRDTLDALRQANEQIDQYRSQTDKAKQRKQLMTLQSPVNGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +++     Q +Q +M +VP  +   + A V  K I  V++G  A ++   +   R  
Sbjct: 337 ELATYTIGGVVQAAQKIMVVVPDDEKMEVEALVLNKDIGFVEQGQDAVIKIESFPYTRYG 396

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
                ++ I    +  +   Q    Y  I+ +    L      + L  G           
Sbjct: 397 YLTGKVKSISHDATTHE---QLGLVYTAIVSLDKNHLNIDGKTVNLTAGMNVSAEIKTGK 453

Query: 420 TTLAQEIIHPITDNWPKIFE 439
             +   ++ P+     + F 
Sbjct: 454 RRVLDYLLSPLQTKIDESFR 473


>gi|156511253|gb|ABU68827.1| RtxD [Listonella anguillarum]
          Length = 450

 Score =  236 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 69/431 (16%), Positives = 160/431 (37%), Gaps = 12/431 (2%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L+++ P+   R+T +++ +G++  + W+    ++I  +++G +L       I+S     
Sbjct: 27  ALQQSPPSPFARITAITLSVGLLLTLLWTYWGKLDIQATANGRLLVPGRSQVIQSYEQSR 86

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  + +G ++ +G PLLT + +  +  I+  +  I+         ++     +     
Sbjct: 87  VAQIHIADGERVEKGMPLLTLDTLGVSQDIERLRHQIRYQTHEFLKYQALRGKADLAQHP 146

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L  A     +Q    +     T    F   + ++   +++ L    S       LE    
Sbjct: 147 LHLALAPSAQQ---EVIDSFDTEKNEFKSVLENLRAEMQVNLASQSS-------LEVDIR 196

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L+ L+S+  + L   K L ++  + Q    +QE+ + +S   L +   +Q  + +    
Sbjct: 197 GLKQLVSNITQRLDAQKKLKQQRLIGQVQYLEQEKELLESERALAQQTSQQHVLQKQYLN 256

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L +      A   +E     +Q     +    +L  + +    + + SP+ GT+      
Sbjct: 257 LEERLKALRAQKAREWQDKSQQAHLQLSALQHELDKVREHEGLQVVRSPVTGTVQQLSVH 316

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q +Q LM IVP   +     K+  K I  +  G   T++   +   R     A 
Sbjct: 317 TLGAVLQPAQNLMIIVPDDSVQVAEVKILNKDIGFIYAGQPVTLKIDAFPYTRYGTLSAT 376

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  +    +  +         +V L    +     ++ L  G             +   +
Sbjct: 377 LVHVSRDSTMDEQLGLVFP-AQVQLLNHTIEVDGASVALLPGMSVVAEIKTDQRRIIDYL 435

Query: 427 IHPITDNWPKI 437
           + PI +   + 
Sbjct: 436 LSPIREYQAEA 446


>gi|15838989|ref|NP_299677.1| hemolysin secretion protein D [Xylella fastidiosa 9a5c]
 gi|9107581|gb|AAF85197.1|AE004049_2 hemolysin secretion protein D [Xylella fastidiosa 9a5c]
          Length = 473

 Score =  236 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 50/422 (11%), Positives = 138/422 (32%), Gaps = 8/422 (1%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           + +    + I   I  + W+    IEI   + G+I+ +     ++   + ++++  + +G
Sbjct: 56  TARWSMRIIIACFIVALLWACFGKIEIVAVAPGKIVVDSRTKVLQPLETAVVRRILIRDG 115

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++     L+  +   T       + ++ N        ++    L            +  
Sbjct: 116 EKVKAHQALIELDATATNAEYTQAEDALLNATLTALRLRALSTALERGQTPQLTHSATIP 175

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
              +        +    F     ++  ++  +   +R+       L   + + +   + +
Sbjct: 176 ADRIAAEQALTLSQFNAFQAKRHNLQATIAQRRAELRTAQDTIEPLTESARISKMRSADY 235

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                    L +   V ++D   +E+    +  +L    +  + +   ++   +E ++  
Sbjct: 236 AI-------LLKDQYVGRHDYLLREQERITAERDLATQRNRIQEIRSALSAAQEELSVLQ 288

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++ ++   DL +          +L   ++     T+ SP+ G +      +       +
Sbjct: 289 ADFRQQTLDDLRKADEQIGQLTPQLAKAKQRNRLMTLRSPVEGIVQQLAIHTVGGVVTPA 348

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q L+ +VP  +   + A V  K I  ++     TV+   +   R       +  I    +
Sbjct: 349 QQLLAVVPVQETLEVEATVLNKDIGFLRPEQRVTVKIESFPYTRYGYLTGKVVSISHDAA 408

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
           Q +          + L  T L      I +  G            T+   ++ P+     
Sbjct: 409 QDEKLGLVFPV-RIRLDNTTLTIDGTQIRMSAGMALSAEIKTGKRTVIDYLLSPLKQYTD 467

Query: 436 KI 437
           + 
Sbjct: 468 EA 469


>gi|237801265|ref|ZP_04589726.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331024124|gb|EGI04181.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 473

 Score =  236 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 59/402 (14%), Positives = 135/402 (33%), Gaps = 6/402 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I++  ++SG+I+       I+S  + ++K   V +G  +  G  LL  +       + 
Sbjct: 76  GKIDVVATASGKIIPSGKTKTIQSSETAVVKAIHVRDGQSVKAGQLLLELDSTSADADVG 135

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  +   R       + LD +N +    + A       ++D    +     +      
Sbjct: 136 RVRSDLLAARVDSARAAAMLDAINQRKPPRDLAGT-----IVDADPMHVMAAERWLQGQY 190

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                SL +    ++    +      +   L+  L    K  +  +NL +K  ++++   
Sbjct: 191 QEYRSSLDLVDAEIQQRQADIQAARIQVMSLQKTLPIATKLASDYENLLKKQYIARHAYL 250

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           ++E+       +L               E         A   + +   L+Q  +  A   
Sbjct: 251 EKEQARLDLERQLSVQQASVLQSTAARQEAERRREGVVAQTRRAMLDLLQQADQKIASFN 310

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
             LT      +  T+ +P+ GT+      +       +QPLM +VP  +   + A +  K
Sbjct: 311 QDLTKARYQEDLTTLEAPVDGTVQQLAVHTVGGVVTPAQPLMVLVPDGQPVEVEAMLENK 370

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I  V+ G   TV+   +   +    +  +  +     + +         ++ L    L 
Sbjct: 371 DIGFVRAGQPVTVKVETFTFTKYGTIEGEVISVSNDAIEDEKRGLIYSS-KIRLNSDTLN 429

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            +  +I+L  G             + +  + P+  +  + F 
Sbjct: 430 VNGVDIKLSPGMAVTAEVKTNKRRVIEYFLSPLQQHAQESFR 471


>gi|15964852|ref|NP_385205.1| putative toxin secretion transmembrane protein [Sinorhizobium
           meliloti 1021]
 gi|307300923|ref|ZP_07580692.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
 gi|15074031|emb|CAC45678.1| Putative secretion membrane fusion protein [Sinorhizobium meliloti
           1021]
 gi|306903878|gb|EFN34464.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti BL225C]
          Length = 440

 Score =  236 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 69/428 (16%), Positives = 151/428 (35%), Gaps = 10/428 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R    +++  T + I G++ +      L IEI     G+++    V  ++   +G I 
Sbjct: 6   IERPVSPTVRLTTWVLISGLVAIFVGGYWLKIEIVARGQGKVIPVSRVQLVQPQTNGRII 65

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN----KY 124
           +  V  G  +  G  L+  + +     I L+   ++  R      +  +  L N      
Sbjct: 66  RILVTEGQPVKAGDLLVGMDTVSVESQIKLRLTEVRRQRRGATVARVIIAALTNVAVAND 125

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DVL     + E +  D   +       +    ++S+   +     ++  +  +R+  + +
Sbjct: 126 DVLAAGRAAFERERHDL--EVIDGAEALIEAVLTSLRDQVARINAQLDRVEQSRITQQAR 183

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               R+ L    +       L +K A+S+ D  ++ R      LE+  +  E   +    
Sbjct: 184 LQKARSDLDISSRKFLSAGKLKDKGAISEVDYFERLREQRARELEVLISESELNILAAEA 243

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N L  +     +  ++   + L +   + A   ++L+          I +P  G +    
Sbjct: 244 NALARQRQSIISTAVENYQKQLNEASTSLAGLEAELSAARNQLALLAIRAPADGKVENLT 303

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
            F+   + +    LM IVP      I A    + I  + KG  A V+F  +   R    +
Sbjct: 304 VFTIGGFVEAGSTLMSIVPSGDGMEIEAFFDNRDIGFLAKGQEAFVKFDAFPAERFGIVR 363

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL--RNGFPAEVLFTAKNTTL 422
             + ++      + + +  +  Y + L +          ++    G  A +        L
Sbjct: 364 GRVTRVGADA--RGDIVPGKWVYAIHLVLDQETIGIGGRDIGFSPGMTATIDVITGERRL 421

Query: 423 AQEIIHPI 430
                 PI
Sbjct: 422 ISYFFEPI 429


>gi|300722354|ref|YP_003711640.1| RTX toxin ABC transporter protein RtxD [Xenorhabdus nematophila
           ATCC 19061]
 gi|297628857|emb|CBJ89440.1| RTX toxin ABC transporter protein RtxD [Xenorhabdus nematophila
           ATCC 19061]
          Length = 475

 Score =  236 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 66/431 (15%), Positives = 162/431 (37%), Gaps = 12/431 (2%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L +  P+   R T +S+ +G++  + W+ +  +++  +++G ++       I++     
Sbjct: 52  ALSQRPPSPFARYTAISLSMGVLIALIWAYMGKLDVQATATGRLIASGRSQIIQAYEQSR 111

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V NG  + +  PL+T   +     I      I+      + E      LN     
Sbjct: 112 IVAIHVGNGQHVEKDAPLITLHTLGVNQDITRL---IEQRDYQTEEEIRYQALLNTHDPN 168

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L   F+ + E+    +  ++    + F+  I+++Y  +++ LT  ++   +   L N   
Sbjct: 169 LLPLFQQQSEERQKKILLHYQHEKQEFDSIITNIYAEMEVNLTSQKARNSDIRSLTN--- 225

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
               L  +  + L   K L +K  +S+ +  +QE+   ++   + +   E   ++     
Sbjct: 226 ----LRENISQRLQARKTLSQKQVISKVEYLEQEKEFLETERLIAQQKSELGILIAQYKS 281

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                        +E    ++Q +   +    +++ +++  E + + SP+ GT+      
Sbjct: 282 HEGRLKSTKVQKEREWLEKIKQAEMQLSLLKQEISKVQEREELEIVRSPVTGTVQQLSVH 341

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q +Q LM IVP   +     ++  K +  V+ G   TV+   +   R    +  
Sbjct: 342 TLGAVLQPAQNLMVIVPDEHVQLAEIQILNKDVGFVRPGQQVTVKVDAFPYTRYGTIEGK 401

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  I    +  +         ++ LK  ++      + +  G             +   +
Sbjct: 402 LLSISRDSATDERLGLVFP-AQISLKQNNIMVDGKPVAITAGMSIVAEIKTDQRRVIDYL 460

Query: 427 IHPITDNWPKI 437
           + PI +   + 
Sbjct: 461 LSPIREYQSEA 471


>gi|170744700|ref|YP_001773355.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium sp. 4-46]
 gi|168198974|gb|ACA20921.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium sp. 4-46]
          Length = 466

 Score =  236 bits (601), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 66/444 (14%), Positives = 156/444 (35%), Gaps = 26/444 (5%)

Query: 8   NLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L    P+   R T  ++I  + G + W+    IEI  ++ G ++    V  ++   + +
Sbjct: 27  ELLETPPSPTLRATAWTLIALVAGTVAWACGSEIEIVATAPGRLVPVGEVKVVQPLETSV 86

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++   V  G  +  G  L+  +  E +  ++  +   + ++  +D E + L        +
Sbjct: 87  VRGIHVAEGDHVAAGQRLIDLDPTEVSADLEATRT--ERMQALLDAEAARL--------L 136

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L +A +    +L +                +++   ++    + +            + S
Sbjct: 137 LSEAEDPVIPRLPEVDEALQGATQVQLRLQVAAHRATMGALRSEIADKQAALASKRVEES 196

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
               L+   +      K+LF +   S+  L Q E  +     + R    + + +   I  
Sbjct: 197 RNAELVPLAEDRFATQKDLFARGNTSKLTLLQAEVDLIDKRADARALPEQARQLQAEIAG 256

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +     A++LKE +       R  A     L    +   ++ + +P++GTI   +  
Sbjct: 257 LEQKLAQARADFLKEAAEQRVTALRKVAVADQTLRKEREREAERHLTAPVSGTIQDLKVH 316

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       ++ L+ +VP      + A V  +++  V++G  A V+   +   R       
Sbjct: 317 TLGGVVSAAETLLTLVPDDMPLEVEASVAHREMGFVREGQRAEVKLEAFPFTRYGTVGGT 376

Query: 367 IEKIDPIISQQDNNLQTQE-------------YYEVILKITDLAFSDNN--IELRNGFPA 411
           +  +    S Q   + T+               Y V + +   +       + LR+G   
Sbjct: 377 VRLVGREASAQGGAMPTRPGEEPRGSGAGEESAYRVRVSLDRASVPTEGGAVALRSGMAV 436

Query: 412 EVLFTAKNTTLAQEIIHPITDNWP 435
           +         +   ++ P+   W 
Sbjct: 437 QADIMTGRRRVIAFLVDPVLAGWK 460


>gi|160334192|gb|ABX24515.1| RTX toxin ABC transporter [Listonella anguillarum]
          Length = 450

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 70/431 (16%), Positives = 159/431 (36%), Gaps = 12/431 (2%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L+++ P+   R+T +++ +G++  + W+    ++I  +++G +L       I+S     
Sbjct: 27  ALQQSPPSPFARITAITLSVGLLLTLLWTYWGKLDIQATANGRLLVPGRSQVIQSYEQSR 86

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  + +G ++ +G PLLT + +  +  I+         R          +FL  +  +
Sbjct: 87  VAQIHIADGERVEKGMPLLTLDTLGVSQDIE---------RLRHQIRYQTHEFLKYQA-L 136

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             KA  ++    L             F+   +     L+     M+    ++  LE    
Sbjct: 137 RGKADLAQHPLYLALAPSAQQEVIDSFDTEKNEFTSVLENLRAEMQVNLASQSSLEVDIR 196

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L+ L+S+  + L   K L ++  + Q    +QE+ + +S   L +   +Q  + +    
Sbjct: 197 GLKQLVSNITQRLDAQKKLKQQRLIGQVQYLEQEKELLESERALAQQTSQQHVLQKQYLN 256

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L +      A   +E     +Q     +    +L  + +    + + SP+ GT+      
Sbjct: 257 LEERLKALRAQKAREWQDKSQQAHLQLSALQHELDKVREHEGLQVVRSPVTGTVQQLSVH 316

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q +Q LM IVP   +     K+  K I  +  G   T++   +   R     A 
Sbjct: 317 TLGAVLQPAQNLMIIVPDDSVQVAEVKILNKDIGFIYAGQPVTLKIDAFPYTRYGTLSAT 376

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  +    +  +         +V L    +     ++ L  G             +   +
Sbjct: 377 LVHVSRDSTMDEQLGLVFP-AQVQLLNHTIEVDGTSVALLPGMSVVAEIKTDQRRIIDYL 435

Query: 427 IHPITDNWPKI 437
           + PI +   + 
Sbjct: 436 LSPIREYQAEA 446


>gi|220921948|ref|YP_002497249.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium nodulans ORS 2060]
 gi|219946554|gb|ACL56946.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium nodulans ORS 2060]
          Length = 511

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 56/453 (12%), Positives = 138/453 (30%), Gaps = 30/453 (6%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L           T    +     + WS L  ++I   +SG I        ++   +G ++
Sbjct: 61  LDTPPSPKATLFTWTICLMFAVALGWSFLAKLDIHAVASGRIQPSGRSKVVQPFETGKVQ 120

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              VENG+++ +G  L+  +  E    +  ++  +  L   I   ++ +  +      + 
Sbjct: 121 AVYVENGARVKEGDVLIELDPTEAEADLAARRSDLAALDAQIIRRRATIAAVEANDPKVT 180

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             F               +         IS    +    L ++      +          
Sbjct: 181 ARFPD------SIPAAVQAREQAAMLADISQYVTTRDALLAQIAEKDATQKRFAASIEAR 234

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             L +  ++   M + L  K A ++  +    + V + + +L  +  +          L 
Sbjct: 235 ERLKAVLKERADMRETLVAKAAGTRAAVIDAVQQVEQVSADLAYDRGQLIEAQAAAQSLQ 294

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  +  + +  + L +  +        +      R++  + +PI+GT+      + 
Sbjct: 295 RRVEQNASETIAKQHQSLTEAAQKRDALRQDVIKAALKRDRTRLTAPISGTVQQLAVTTL 354

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  QPL+ +VP+     + A V  K I  V  G  A V+   +   R    +  + 
Sbjct: 355 GQVVTAGQPLLVVVPNEGPIEVEALVQNKDIGFVMPGQDAVVKIDAFPFTRYGSIEGKVL 414

Query: 369 KIDPIISQQDNNLQTQE----------------------YYEVILKITDLAFSDNN--IE 404
           ++        +     +                       + V ++++      +   + 
Sbjct: 415 RVSRDAVDDKDANGGADAVAVGRGQSLAPVSGTPRTQNLVFPVTIELSRSTIEADGKTVA 474

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           L  G    V     +  +   ++ P+ +     
Sbjct: 475 LTPGMTTTVEIRTGSRRVIDYVLSPVKETTSTA 507


>gi|188591520|ref|YP_001796119.1| Type I secretion system membrane fusion protein [Cupriavidus
           taiwanensis]
 gi|170938915|emb|CAP63916.1| Type I secretion system membrane fusion protein [Cupriavidus
           taiwanensis LMG 19424]
          Length = 476

 Score =  235 bits (600), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 70/421 (16%), Positives = 150/421 (35%), Gaps = 12/421 (2%)

Query: 13  HPASLKRM-TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           HPA    M  ++++ G++ LI   I   ++I V++ G+ +    V  I+   +G+I++  
Sbjct: 58  HPAPRWTMRIIVALTGLVLLIG--IFGKLDIVVTAKGKFVPNARVKVIQPAVTGVIREIL 115

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V +G ++  G  L+  +  +     D   +S  +        ++ L     K        
Sbjct: 116 VRDGQRVAAGQLLVKLDTTQAAADADKAYLSRVDAGLGAARARALLGAQEIKQPPQVVQV 175

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +   E  +       +   + +   I S    L  +          R     + + L+A 
Sbjct: 176 DGASEDRMREAQHLANGAWREYQDRIDSAQAELHKREAA-------RDSTRAEVARLQAT 228

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               ++     K L     V+++D   +E+       EL         +   I E   E 
Sbjct: 229 APLARQQAMDYKALVADKYVARHDYLDKEQKALDLENELAAQRAHVLELTAGIAEQRAEL 288

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               + +  +   +LE++ +  A   +  T  +  +E  ++ +P+AGT+    + +    
Sbjct: 289 GALASKFRHDQLDELEKHTQQGAQSRNDETKAQTRQELMSLTAPVAGTVQQLAAHTLGGV 348

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           A  +Q LM+IVP      +  ++  K I  V  G    V+   +   R    +  +  + 
Sbjct: 349 ATTAQALMEIVP-DDTLEVEGQLENKDIGFVDVGQAVAVKVEAFPYSRYGFIEGTVLSVS 407

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
              +       T     + L    +   +  I L  G            T+A+  + P+ 
Sbjct: 408 NDATNDKKLGLTFPV-RIRLTTNRIRVENRWIALTPGMAVTADIRTGKRTVAEYFLGPVI 466

Query: 432 D 432
           +
Sbjct: 467 E 467


>gi|15987964|gb|AAL12821.1| LktD [Bibersteinia trehalosi]
          Length = 472

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 60/421 (14%), Positives = 151/421 (35%), Gaps = 9/421 (2%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + ++   ++ +I  I  + +  +EI  ++ G++       EIK   + I+++  V++G  
Sbjct: 58  RLISYSIMLFLIIAIVLASVSKVEIVATAPGKLTFSGRSKEIKPIENAIVQEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   + +   I     S+   +      ++ L  +  +        +    +
Sbjct: 118 VEKGQLLVSLTALGSDADIKKTIASLSLAKLESYRYQTLLTAIEKESL---PVIDLSRTE 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D   +       +     ++  +    K    +     +  +              Q+
Sbjct: 175 FKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTIFAYVRKYEGATRIEQE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   K L+++ ++S+++L  QE  + ++  EL     +   +   +  + +E  L    
Sbjct: 235 KLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNELENDLLNVKEELELITQF 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  ++   L+Q+         +L    + ++   I +PI+GT+   +  +       ++ 
Sbjct: 295 FKSDVLEKLKQHIENERQLRLELEKNNQRKQASMIRAPISGTVQQLKIHTIGGVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM +VP   +      V  K I  V  G    ++   +   R       I+ I P   +Q
Sbjct: 355 LMVMVPEDDVLEASVLVQNKDIGFVTAGQEVVIKVETFPYTRYGYLTGRIKHISPDAIEQ 414

Query: 378 DNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            N       +   + I     S      IEL +G            ++   ++ P+ ++ 
Sbjct: 415 PNVGLV---FNATISIDKKNLSSPDGRTIELGSGMTITAEIKTGERSVMSYLLSPLEESI 471

Query: 435 P 435
            
Sbjct: 472 T 472


>gi|3661486|gb|AAC61717.1| chromosomal hemolysin D [Escherichia coli]
          Length = 439

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 66/427 (15%), Positives = 155/427 (36%), Gaps = 3/427 (0%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++       + +    +  ++  +  S+L  +EI  +++G++       EIK   + I+K
Sbjct: 10  IETPVSRRPRLVAYFIMGFLVIAVILSVLGQVEIVATANGKLTLSGRSKEIKPIENSIVK 69

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G  + +G  LL           D  K     L+  ++  +  +   + + + L 
Sbjct: 70  EIIVKEGESVRKGDVLLKL--TALGAEADTLKTQSSLLQTRLEQTRYQILSRSIELNKLP 127

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +     E    +   +     + +     S+       K   +      RL +  + +  
Sbjct: 128 ELKLPDEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTILARINRY 187

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             L    +  L   ++L  K A++++ + +QE    ++  ELR    + + +   I    
Sbjct: 188 ENLSRVEKSRLDDFRSLLHKQAIAKHAVLEQENKYVEAANELRVYKSQLEQIESEILSAK 247

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  L    +  EI   L Q          +L   E+ ++   I +P++G +   +  + 
Sbjct: 248 EEYQLVTQLFKNEILDKLRQTTDNIELLTLELEKNEERQQASVIRAPVSGKVQQLKVHTE 307

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP      + A V  K I  +  G  A ++   +   R       ++
Sbjct: 308 GGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVK 367

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I+    +            V ++  DL+  + +I L +G            ++   ++ 
Sbjct: 368 NINLDAIEDQKLGLVFNV-IVSVEENDLSTGNKHIPLSSGMAVTAEIKTGMRSVISYLLS 426

Query: 429 PITDNWP 435
           P+ ++  
Sbjct: 427 PLEESVT 433


>gi|2208952|emb|CAA74193.1| HlyD protein [Escherichia coli]
          Length = 478

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 153/418 (36%), Gaps = 3/418 (0%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +    +  ++  +  S+L  +EI  +++G++       EIK   + I+K+   + G  
Sbjct: 58  RLVAYFIMGFLVIAVILSVLGQVEIVATANGKLTLSGRSKEIKPIENSIVKEIIGKEGES 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  LL           D  K     L+  ++  +  +   + + + L +     E  
Sbjct: 118 VRKGDVLLKL--TALGAEADTLKTQSSLLQTRLEQTRYQILSRSIELNKLPELKLPDEPY 175

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             +   +     + +     S+       K   +      RL +  + +    +    + 
Sbjct: 176 FQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTILARINRYENVSRVEKS 235

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   ++L  K A++++ + +QE    ++  ELR    + + +   I    +E  L    
Sbjct: 236 RLDDFRSLLHKQAIAKHAVLEQENKYVEAANELRVYKSQLEQIESEILSAKEEYQLVTQL 295

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  EI   L Q   +      +L   E+ ++   I +P++G +   +  +       ++ 
Sbjct: 296 FKNEILDKLRQTTDSIELLTLELEKNEERQQASVIRAPVSGKVQQLKVHTEGGVVTTAET 355

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP      + A V  K I  +  G  A ++   +   R       ++ I+    + 
Sbjct: 356 LMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVKNINLDAIED 415

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
                      V ++  DL+  + +I L +G            ++   ++ P+ ++  
Sbjct: 416 QKLGLVFNV-IVSVEENDLSTGNKHIPLSSGMAVTAEIKTGMRSVISYLLSPLEESVT 472


>gi|118589154|ref|ZP_01546561.1| Membrane-fusion protein [Stappia aggregata IAM 12614]
 gi|118438483|gb|EAV45117.1| Membrane-fusion protein [Stappia aggregata IAM 12614]
          Length = 439

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 51/422 (12%), Positives = 149/422 (35%), Gaps = 17/422 (4%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P + +R+  +  +     +TW+ +  +    +++GEI+    V  +     GI+ +  
Sbjct: 23  PPPVAYRRVLQVLSLTSAAFLTWAAIGQVREVANATGEIVPAGKVQTVGHLEGGIVAEVM 82

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G  + +GTP++   +  T+  ++  +  +K L    + ++     L    + L    
Sbjct: 83  VREGQLVEKGTPIVRLLETATSSDLEKVQTRLKFL--ATEEQRLGNPDLGTGANGLRLGA 140

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +            +       ++    ++ +  +    R+         +  + +     
Sbjct: 141 D----------AGFSEAQQAAYDAQRLALEKEQQALKARVSEKQAELKSILERIAFQETQ 190

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   Q+   + +NLF++   S+      +  +  +  +L E      ++   + E     
Sbjct: 191 VEIEQEKYQIQENLFKQGYTSKRRFLDSKSSLQNAQSQLSELKGMSGSVTAQLTEATASL 250

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               A   +E + +  +  +  ++ + +    +   ++  + +P++G +         + 
Sbjct: 251 ERSIAVAEEEQAVERSRVAQERSELVFEADKQKDRFDRLFVRAPVSGHVKALYLKGPGSV 310

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 + ++VP         +V+P+ I HV  G  A +    +    E   K  +  I 
Sbjct: 311 LAPGDVVAEVVPSDSDLVAEVRVSPRDIGHVDVGDEAEIAVTTFDPNIEGTLKGEVSVIS 370

Query: 372 PIISQQDNNLQTQEYYEVIL--KITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
               + +       Y++  +  K   +    +   +  G   +      + ++ Q ++ P
Sbjct: 371 ASSFRDE---YGNYYFKATIPLKTNTIGHGASAETISPGMVVDAKIVTGSKSVLQYMLKP 427

Query: 430 IT 431
           +T
Sbjct: 428 VT 429


>gi|28199297|ref|NP_779611.1| hemolysin secretion protein D [Xylella fastidiosa Temecula1]
 gi|182682024|ref|YP_001830184.1| HlyD family type I secretion membrane fusion protein [Xylella
           fastidiosa M23]
 gi|28057403|gb|AAO29260.1| hemolysin secretion protein D [Xylella fastidiosa Temecula1]
 gi|182632134|gb|ACB92910.1| type I secretion membrane fusion protein, HlyD family [Xylella
           fastidiosa M23]
          Length = 473

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 51/415 (12%), Positives = 136/415 (32%), Gaps = 8/415 (1%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           + I   I  + W+    IEI   + G+I+ +     ++   + ++++  V +G ++    
Sbjct: 63  IIIACFIVTLLWACFGKIEIVAVAPGKIVVDSRTKVLQPLETAVVRRILVRDGEKVKAHQ 122

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L+  +   T       + ++ N        ++    L            +     +   
Sbjct: 123 ALIELDATATGAEYAQAEDALLNATLTALRLRALSTALERGQTPQLTHSATIPADRIAAE 182

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                +    +     ++  ++  +   +R+       L   + + +   + +       
Sbjct: 183 QALTLSQFNAYQAKRHNLQATIAQRRAELRTAQDTIEPLTESARISKMRSADYAI----- 237

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             L +   V ++D   +E+    +  +L    +  + +   ++   +E ++  A++ ++ 
Sbjct: 238 --LLKDKYVGRHDYLLREQERITAERDLATQRNRIQEIRSALSAAQEELSVLQADFRQQT 295

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
             DL +          +L   ++     T+ SP+ G +      +       +Q L+ +V
Sbjct: 296 LDDLRKADEQIGQLTPQLAKAKQRNRLMTLRSPVEGIVQQLAIHTVGGVVTPAQQLLAVV 355

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P  +   + A V  K I  ++     TV+   +   R       I  I    +Q +    
Sbjct: 356 PVQETLEVEATVLNKDIGFLRPEQRVTVKIESFPYTRYGYLTGKIISISHDAAQDEKLGL 415

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
                 + L  T L      I +  G            T+   ++ P+     + 
Sbjct: 416 VFPV-RIRLDNTTLTIDGTQIRMSAGMALSAEIKTGKRTVIDYLLSPLEQYTDEA 469


>gi|170745631|ref|YP_001752078.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium radiotolerans JCM 2831]
 gi|170659359|gb|ACB28408.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium radiotolerans JCM 2831]
          Length = 479

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 71/459 (15%), Positives = 145/459 (31%), Gaps = 29/459 (6%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                +    P+ ++   +L I       + WS    I++   + G+I     V  ++  
Sbjct: 23  PAALEVLERPPSPVRMALILVIAAFFSTALLWSYFGRIDVVAVAQGKIQPTGRVKVVQPI 82

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G I+  +VENG ++     L+ F+  E        + +    R      K+A+  + +
Sbjct: 83  EAGRIRSIRVENGQRVQANDVLIEFDATEALAEETALRFAHAAYRAEALRRKAAIGRVRS 142

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                 +A         +           V    +  +  ++   + + R     R  L 
Sbjct: 143 -----FQATPPAIAWDPEIPDTIREREEHVLAGDLRQLDTTVASLIAQRRLKEAERERLR 197

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RAL+++  + + M   L +KN+ ++  +             L     +      
Sbjct: 198 ETIKAQRALVATLVERVNMRTTLVDKNSGTRASVIDSMETYLTQQATLAAEQGQLGETEA 257

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I     E       +L +  + L + QR   D   +L       E  TI +PIAG +  
Sbjct: 258 AIEVASQEILKAKDGFLADNLQKLAEAQRQADDAGQRLARARAHTEHMTIRAPIAGLVNA 317

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           +   +    A   + LM+IVP      I A +  K I  V     A ++       R   
Sbjct: 318 SSVTTVGQVASVGEELMRIVPDGSQLEIEAYLPNKDIGFVHPDQEAEIKIESLPFTRYGT 377

Query: 363 FKAIIEKIDPIISQQDNNLQTQE---------------------YYEVILKITDLAF--S 399
               + ++      + +  Q +                       + VI++    +    
Sbjct: 378 VSGTVLQVASDAIPEPDAQQVEGNPSKSSRSIGFTGGGQRTQNLVFPVIVRPNAKSIFAD 437

Query: 400 DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             +I L  G    +        + + I  P+ +     F
Sbjct: 438 GRDISLSPGMSVAIEIKTGRRRILEYIFSPLVEIGATAF 476


>gi|32141417|gb|AAP74654.1| MbxD [Moraxella bovis]
          Length = 475

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 68/427 (15%), Positives = 157/427 (36%), Gaps = 8/427 (1%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            S K    + +I ++  + WS +  I+I  ++SG+I +      I+S  + I+K   V +
Sbjct: 53  RSSKWTARIIMIFVLFALLWSWVGQIDIVATASGKISSGSRSKTIQSLETAIVKAVYVRD 112

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + QG  L+    I +   +   + +++  +      ++ L  LN++ +       ++
Sbjct: 113 GQNVQQGEILVDLVGIGSDSDVAQSEKALRAAQLSKLRLEAILSALNHRINPQIDVAYAK 172

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
              + +       T ++       +    LK+ L   ++   +    E K   + A+   
Sbjct: 173 SLNISESEINEAQTLAQNQYQAWLAQDEQLKLTLKGHQAELQSARSQEQKLVSVGAIEHQ 232

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
              D    ++L  +N +S++   +QE  +  +  +L+    + + +   I +      L 
Sbjct: 233 KTDDY---RSLKAENFISEHAYLEQESKLLSNQNDLQSTRSQIQKIQAAIMQAEQNRMLY 289

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N  ++    L Q          +    ++ ++  +I SP+ GTI    +++     Q 
Sbjct: 290 TQNLKRDTLESLRQTNEQINQYTGQTNKAKQRQKLLSIKSPVNGTIQELTAYTLGGVVQA 349

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           +Q +M + P+     +   V  K I  VK G    ++   +   R       I+ I    
Sbjct: 350 AQKIMVVAPNDNQVEVEVLVLNKDIGFVKAGQNVIIKIESFPYTRYGYLTGKIKSISHDA 409

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            +  +       Y  ++ +     + +   I L  G             +   I+ P+  
Sbjct: 410 IEHQHLGLV---YTALVSLDKSTLNIDGVTINLTPGMNVTAEIKTGKRRVLDYILSPLQT 466

Query: 433 NWPKIFE 439
              + F 
Sbjct: 467 KVDESFR 473


>gi|222147450|ref|YP_002548407.1| secretion protein HlyD family [Agrobacterium vitis S4]
 gi|221734440|gb|ACM35403.1| secretion protein HlyD family [Agrobacterium vitis S4]
          Length = 491

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 70/449 (15%), Positives = 172/449 (38%), Gaps = 24/449 (5%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            +    P+ ++   ++ I  +  + ITW+ +  I+I  ++ G+I     V  ++   +G 
Sbjct: 34  EILETPPSPVRMALVVIIAALFAVAITWAAVGKIDIVATAQGKIEPTLKVKIVQPLATGK 93

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+NG  + +   L+  +D       D     +   R  +    +A++ ++++   
Sbjct: 94  VSDVLVQNGDHVSKDQVLVRLDDSSAASQYDDLSEQLAASRAEVARRSAAIETVSSRNWP 153

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +  A +                   V +  ++ +   L +  +++    ++        S
Sbjct: 154 VGGATQINVAWPEGISVALQRREQSVLDSDVAQLSAQLSLIDSQIAQKTIDSDAFGATVS 213

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              +L+S+ +K   M + L + NA+S  D     +   K  + L+ +I+E+ +   +I  
Sbjct: 214 AQESLISTLKKLTFMRETLSQNNAMSTADWLNALQEEEKEQVSLQSDINEKLDADANIAV 273

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +A     +++ + ++ LE       +   +L   +   +  T+ SP+ GTI  +   
Sbjct: 274 LKRQAVSTTQSFIADYAQKLEAADEQVQELTQQLREAKAQLDDMTLRSPVDGTIEASTLT 333

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S          ++++VP      I+A +T  +I  V+ G  AT++   +   +       
Sbjct: 334 SIGQVLTSGSEVLRVVPEGSHLDIQAYITNDEIGFVQVGQAATIKVTAFPYTQYGTISGT 393

Query: 367 IEKIDPI---ISQQDNNLQTQEY------------------YEVILKITD--LAFSDNNI 403
           + ++       SQ   +L    Y                  + VI+++    +  ++ + 
Sbjct: 394 VLQVGKDAVSTSQAQADLADSSYTMTTTASGSTSQSADTLVFPVIVQLDKNFIGTAERSA 453

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            +  G    V     + T+   +  P+ D
Sbjct: 454 YVSPGMSVSVDINTGDRTILDYLFAPLVD 482


>gi|71898392|ref|ZP_00680565.1| Type I secretion membrane fusion protein, HlyD [Xylella fastidiosa
           Ann-1]
 gi|71731915|gb|EAO33973.1| Type I secretion membrane fusion protein, HlyD [Xylella fastidiosa
           Ann-1]
          Length = 473

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 51/422 (12%), Positives = 138/422 (32%), Gaps = 8/422 (1%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           + +    + I   I  + W+    IEI   + G+I+ +     ++   + ++++  V +G
Sbjct: 56  TARWSMRIIIACFIVTLLWACFGKIEIVAVAPGKIVVDSRTKVLQPLETAVVRRILVRDG 115

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++     L+  +   T       + ++ N        ++    L            +  
Sbjct: 116 EKVKAHQALIELDATATGAEYAQAEDALLNATLTALRLRALSTALERGQTPQLTHSATIP 175

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
              +        +    +     ++  ++  +   +R+       L   + + +   + +
Sbjct: 176 ADRIAAEQALTLSQFNAYQAKRHNLQATIAQRRAELRTAQDTIEPLTESARISKMRSADY 235

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                    L +   V ++D   +E+    +  +L    +  + +   ++   +E ++  
Sbjct: 236 AI-------LLKDKYVGRHDYLLREQERITAERDLATQRNRIQEIRSALSAAQEELSVLQ 288

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++ ++   DL +          +L   ++     T+ SP+ G +      +       +
Sbjct: 289 ADFRQQTLDDLRKADEQIGQLTPQLAKAKQRNRLMTLRSPVEGIVQQLAIHTVGGVVTPA 348

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q L+ +VP  +   + A V  K I  ++     TV+   +   R       I  I    +
Sbjct: 349 QQLLAVVPVQETLEVEATVLNKDIGFLRPEQRVTVKIESFPYTRYGYLTGKIISISHDAA 408

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
           Q +          + L  T L      I +  G            T+   ++ P+     
Sbjct: 409 QDEKLGLVFPV-RIRLDNTTLTIDGTQIRMSAGMALSAEIKTGKRTVIDYLLSPLKQYTD 467

Query: 436 KI 437
           + 
Sbjct: 468 EA 469


>gi|307578289|gb|ADN62258.1| HlyD family type I secretion membrane fusion protein [Xylella
           fastidiosa subsp. fastidiosa GB514]
          Length = 470

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 51/415 (12%), Positives = 136/415 (32%), Gaps = 8/415 (1%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           + I   I  + W+    IEI   + G+I+ +     ++   + ++++  V +G ++    
Sbjct: 60  IIIACFIVTLLWACFGKIEIVAVAPGKIVVDSRTKVLQPLETAVVRRILVRDGEKVKAHQ 119

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L+  +   T       + ++ N        ++    L            +     +   
Sbjct: 120 ALIELDATATGAEYAQAEDALLNATLTALRLRALSTALERGQTPQLTHSATIPADRIAAE 179

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                +    +     ++  ++  +   +R+       L   + + +   + +       
Sbjct: 180 QALTLSQFNAYQAKRHNLQATIAQRRAELRTAQDTIEPLTESARISKMRSADYAI----- 234

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             L +   V ++D   +E+    +  +L    +  + +   ++   +E ++  A++ ++ 
Sbjct: 235 --LLKDKYVGRHDYLLREQERITAERDLATQRNRIQEIRSALSAAQEELSVLQADFRQQT 292

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
             DL +          +L   ++     T+ SP+ G +      +       +Q L+ +V
Sbjct: 293 LDDLRKADEQIGQLTPQLAKAKQRNRLMTLRSPVEGIVQQLAIHTVGGVVTPAQQLLAVV 352

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P  +   + A V  K I  ++     TV+   +   R       I  I    +Q +    
Sbjct: 353 PVQETLEVEATVLNKDIGFLRPEQRVTVKIESFPYTRYGYLTGKIISISHDAAQDEKLGL 412

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
                 + L  T L      I +  G            T+   ++ P+     + 
Sbjct: 413 VFPV-RIRLDNTTLTIDGTQIRMSAGMALSAEIKTGKRTVIDYLLSPLEQYTDEA 466


>gi|10955285|ref|NP_052626.1| hemolysin D [Escherichia coli O157:H7 str. Sakai]
 gi|75994496|ref|YP_325610.1| hemolysin transport protein [Escherichia coli O157:H7 EDL933]
 gi|149930761|ref|YP_001294702.1| w0038 [Escherichia coli]
 gi|168762998|ref|ZP_02788005.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4501]
 gi|168789923|ref|ZP_02814930.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC869]
 gi|168802571|ref|ZP_02827578.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC508]
 gi|217329901|ref|ZP_03445976.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           TW14588]
 gi|226200964|ref|YP_002756568.1| hemolysin transport protein [Escherichia coli]
 gi|260718955|ref|YP_003225096.1| hemolysin D [Escherichia coli O103:H2 str. 12009]
 gi|260763806|ref|YP_003237845.1| hemolysin D [Escherichia coli O26:H11 str. 11368]
 gi|261225652|ref|ZP_05939933.1| hemolysin transport protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261257893|ref|ZP_05950426.1| hemolysin D [Escherichia coli O157:H7 str. FRIK966]
 gi|284000232|ref|YP_003377919.1| hemolysin D [Escherichia coli O26:H-]
 gi|37695749|gb|AAR00411.1|AF401292_12 w0038 [Escherichia coli]
 gi|3337017|dbj|BAA31776.1| Hemolysin D [Escherichia coli O157:H7 str. Sakai]
 gi|3822164|gb|AAC70118.1| hemolysin transport protein [Escherichia coli O157:H7]
 gi|118201518|gb|ABK79667.1| hemolysin transport protein [Escherichia coli O157:H7]
 gi|189366728|gb|EDU85144.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4501]
 gi|189370563|gb|EDU88979.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC869]
 gi|189375464|gb|EDU93880.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC508]
 gi|217317132|gb|EEC25565.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           TW14588]
 gi|219881593|gb|ACL51963.1| hemolysin transport protein [Escherichia coli]
 gi|238801611|gb|ACR56509.1| hemolysin D [Escherichia coli]
 gi|257757231|dbj|BAI28732.1| hemolysin D [Escherichia coli O26:H11 str. 11368]
 gi|257762466|dbj|BAI33962.1| hemolysin D [Escherichia coli O103:H2 str. 12009]
 gi|283445172|gb|ADB20516.1| hemolysin D [Escherichia coli O26:H-]
 gi|320187888|gb|EFW62557.1| Microcin H47 secretion protein [Escherichia coli O157:H7 str.
           EC1212]
 gi|323157090|gb|EFZ43216.1| hemolysin secretion protein D, plasmid [Escherichia coli EPECa14]
 gi|325699395|gb|ADZ45126.1| hemolysin D [Escherichia coli]
 gi|326337141|gb|EGD60977.1| Microcin H47 secretion protein [Escherichia coli O157:H7 str. 1125]
 gi|326347639|gb|EGD71357.1| Microcin H47 secretion protein [Escherichia coli O157:H7 str. 1044]
          Length = 479

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/429 (15%), Positives = 151/429 (35%), Gaps = 6/429 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++         +    ++ +I  +  S+L  +E+   ++G+  +     EIK   + I++
Sbjct: 49  IETPVSRRSHFVVWSILLFVIISLLLSVLGKVEVVSVANGKFTHSGRSKEIKPIENAIVE 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K  V++GS + +  PL+          I   + S+   +       + L     + ++ E
Sbjct: 109 KIMVKDGSFVKKNDPLVELTVPGVESDILKSEASLLYEKTE-QYRYAILSESIQRNELPE 167

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                      +  G++    S +      +       K   +    + R     + SL 
Sbjct: 168 IRITDFPGGEDNAGGEHFQRVSSLIKEQFMTWQNRKNQKQLTLNKKIVERDAALARVSLY 227

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +S   + L   K L  K AVSQ+ + +QE    ++  E    + +   + + I  + 
Sbjct: 228 EHQVSQEGRKLNDFKYLLNKKAVSQHSVMEQENSYIQAKNEHAVWLAQVSQLEKEIELVR 287

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  LE   +  EI     ++         +L    + +    I +P++GT+      + 
Sbjct: 288 EELALETNIFRSEIIEKHRKSTDNIVLLEHELEKNRQRKASSFIKAPVSGTVQELNIHTE 347

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP + +  + A V  K I  ++ G    ++   Y   R       ++
Sbjct: 348 GGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQPGQEVVIKVDAYPYTRHGYLTGKVK 407

Query: 369 KIDPIISQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            I        +       + VI+ +   D+      I +  G            ++   +
Sbjct: 408 NITADSVSVPDTGLV---FNVIISVDRNDIQGERKKIPVTAGMTVMAEIKTGVRSVISYL 464

Query: 427 IHPITDNWP 435
           + P+ +   
Sbjct: 465 LSPLKETIN 473


>gi|168750736|ref|ZP_02775758.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4113]
 gi|168757312|ref|ZP_02782319.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4401]
 gi|168769224|ref|ZP_02794231.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4486]
 gi|168769334|ref|ZP_02794341.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4486]
 gi|168776707|ref|ZP_02801714.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4196]
 gi|168783051|ref|ZP_02808058.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4076]
 gi|195940316|ref|ZP_03085698.1| hemolysin D [Escherichia coli O157:H7 str. EC4024]
 gi|208811376|ref|ZP_03253136.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4206]
 gi|208817435|ref|ZP_03258464.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4045]
 gi|208823306|ref|ZP_03263623.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4042]
 gi|209395593|ref|YP_002268406.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4115]
 gi|254667468|ref|YP_003082154.1| hemolysin transport protein [Escherichia coli O157:H7 str. TW14359]
 gi|187767965|gb|EDU31809.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4196]
 gi|188015160|gb|EDU53282.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4113]
 gi|188999506|gb|EDU68492.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4076]
 gi|189355670|gb|EDU74089.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361603|gb|EDU80022.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4486]
 gi|189361645|gb|EDU80064.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4486]
 gi|208730006|gb|EDZ79223.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4206]
 gi|208730612|gb|EDZ79311.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4045]
 gi|208736901|gb|EDZ84586.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4042]
 gi|209157048|gb|ACI34482.1| leukotoxin secretion protein D [Escherichia coli O157:H7 str.
           EC4115]
 gi|254595820|gb|ACT75180.1| hemolysin transport protein [Escherichia coli O157:H7 str. TW14359]
          Length = 479

 Score =  234 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 67/429 (15%), Positives = 151/429 (35%), Gaps = 6/429 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++         +    ++ +I  +  S+L  +E+   ++G+  +     EIK   + I++
Sbjct: 49  IETPVSRRSHFVVWSILLFVIISLLLSVLGKVEVVSVANGKFTHSGRSKEIKPIENAIVE 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K  V++GS + +  PL+          I   + S+   +       + L     + ++ E
Sbjct: 109 KIMVKDGSFVKKNDPLVELTVPGVESDILKSEASLLYEKTE-QYRYAILSESIQRNELPE 167

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                      +  G++    S +      +       K   +    + R     + SL 
Sbjct: 168 IRITDFPGGEDNAGGEHFQRVSSLIKEQFMTWQNRKNQKQITLNKKIVERDAALARVSLY 227

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +S   + L   K L  K AVSQ+ + +QE    ++  E    + +   + + I  + 
Sbjct: 228 EHQVSQEGRKLNDFKYLLNKKAVSQHSVMEQENSYIQAKNEHAVWLAQVSQLEKEIELVR 287

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  LE   +  EI     ++         +L    + +    I +P++GT+      + 
Sbjct: 288 EELALETNIFRSEIIEKHRKSTDNIVLLEHELEKNRQRKASSFIKAPVSGTVQELNIHTE 347

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP + +  + A V  K I  ++ G    ++   Y   R       ++
Sbjct: 348 GGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQPGQEVVIKVDAYPYTRHGYLTGKVK 407

Query: 369 KIDPIISQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            I        +       + VI+ +   D+      I +  G            ++   +
Sbjct: 408 NITADSVSVPDTGLV---FNVIISVDRNDIQGERKKIPVTAGMTVMAEIKTGVRSVISYL 464

Query: 427 IHPITDNWP 435
           + P+ +   
Sbjct: 465 LSPLKETIN 473


>gi|317970190|ref|ZP_07971580.1| HlyD family secretion protein [Synechococcus sp. CB0205]
          Length = 465

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 61/433 (14%), Positives = 144/433 (33%), Gaps = 27/433 (6%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +L++       R++L  + G   L   W+ L P+   V +SGE++ E  V  ++    GI
Sbjct: 52  DLEQKPDNRHLRLSLYFLGGAAALFVPWAALTPLTQVVQASGEVVPEGAVNVVQHLEGGI 111

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + K  V +G ++ +G  LL           D  +  +KNL       ++A+         
Sbjct: 112 VSKVDVRDGQEVKEGEVLLELSPKLVGSEYDAAEQKLKNLLLQQKQLQAAIRG------- 164

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +      + Q ++   K  +   ++    +++    L      ++         + +  
Sbjct: 165 -DATLSVGDLQGIEQGNKVSAAQQQLLTSRLANRADQLAAARATVQQK-------QAEVE 216

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L   ++   + + M  +L E    S+  L   +  +     E++   +E +  L     
Sbjct: 217 GLNEQINLQTQQVAMWASLQESGGASRLQLLHTKTQL----AEMKGARNEARKALSQAQA 272

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                    +    E +  + +     A     +  +    E+  + +P++G I   +  
Sbjct: 273 NLKGVE---SGLHFENNSQIAELVSEEAVVAENIKKVRNQLERTKVTAPVSGVISDLRYK 329

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +          ++++VP      +  +V  K I  VK G    V+   +           
Sbjct: 330 APGAVVGPGAVVLQVVPTGSKKLVEVRVPSKDIGFVKVGQRVDVKLQPFDSTIYGSVPGK 389

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +  +     Q  +      YY   +++             ++ G P       +  ++ +
Sbjct: 390 VLSLAGTTVQDPDTRA--YYYLARVELDRQFVDQRRKTFPIQAGMPLVADIQGQRRSVLR 447

Query: 425 EIIHPITDNWPKI 437
            +  P T      
Sbjct: 448 YLFQPFTRTMDSA 460


>gi|123442270|ref|YP_001006251.1| hemolysin transport protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122089231|emb|CAL12077.1| hemolysin transport protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 464

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 63/429 (14%), Positives = 147/429 (34%), Gaps = 11/429 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R      + ++ ++ WSI   ++I  S++G+++  ++   I+S   G++ 
Sbjct: 43  VERPVAPLARRTAWFLALTLLLVLVWSIAGRLDIHASANGKVIVAEHSKIIQSLEPGVVV 102

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +G +++ G  LL    I     ++     + +    ++  + +    ++  +   
Sbjct: 103 AINVHDGDRVVAGQVLLELNPIGVDAEVNNINQQLMHR--SLEAARMSALLTDDPLENFI 160

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               S E  ++        T   +       V   L  + +                +  
Sbjct: 161 YPDNSPENLVI--------TAKSLLVKEYDEVNAELARQDSERAVNQAYIQAGSTNITHH 212

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +AL+ +  + L  ++ L +  A+++ ++  QER    ++ E      EQ  +   +  L 
Sbjct: 213 KALMKNIHQRLQALQTLVKSKAIAEAEVLIQEREWLNASAEGNRLESEQVVLRAKMRNLA 272

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A   +     L +          +L  L + + Q+T+ +P+AG I  +   + 
Sbjct: 273 QVRLHYLAEKKRSYQEQLNKAHEVINQLKQELVKLMEKQRQQTLRAPVAGVIQQSTVHTL 332

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP S    +   +  K I  V  G    V+   +   R       ++
Sbjct: 333 GGVVTSAQPLMVLVPESHQLELDVMILNKDIGFVLPGQAVEVKIDSFPYTRFGTLSGEVK 392

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I     +            + L    L      + L  G             +   ++ 
Sbjct: 393 HISRDAMEDQQQGLVFP-ARIRLDSDTLIVEGKPVRLSAGMAVSAEIKTGRRRVIDYLLS 451

Query: 429 PITDNWPKI 437
           P+     + 
Sbjct: 452 PLQQYQSEA 460


>gi|17549404|ref|NP_522744.1| putative hemolysin-type secretion transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17431657|emb|CAD18334.1| probable typeIsecretion system transmembrane protein [Ralstonia
           solanacearum GMI1000]
          Length = 358

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 124/410 (30%), Gaps = 56/410 (13%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    ++      G++        I+S   GI+ +     G  +  G  L T + ++  
Sbjct: 2   WAAFAGLDEVAIGEGKVTPASKGQVIQSLEGGILSELAAREGDVVEAGQKLATLDPVQAR 61

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             ++     I  L+      ++ +D L    +V      +RE+ + D   +  +   + F
Sbjct: 62  SSMEEALERISALQARAARLRAEMDDL---PEVTFPPELAREKAVTDRERQLFAANRRAF 118

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +++                            LR  L   + +L +   L    A ++
Sbjct: 119 RENVAN----------------------------LREQLRLAEDELKIAMPLLRTGATNE 150

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++ + ++   +   +L     E                     Y   +  D        
Sbjct: 151 VEILRLKQRAAEFATKLAATQSE---------------------YYVALKADYASTMADL 189

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
              +           +  I SP  G +   +  +          LM+IVP      I A+
Sbjct: 190 GPLLKVREGRADQLRRTVITSPARGIVKDIRVSTIGGVVGAGGVLMEIVPLDDQLLIEAR 249

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           ++P+ I  +  G  ATV+   +         A +E+I P   +   + +   YY V    
Sbjct: 250 LSPRDIAFIHPGQEATVKITAFESSIYGSLPARVERISPDTIEDQVDRRV-YYYRVYALT 308

Query: 394 TDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
                         +  G  A         T+   +I P+      + ER
Sbjct: 309 RHAYLETKDGKRHPILPGMVATTEIRTGRRTVLDYLIKPLNRAAEALRER 358


>gi|260751839|ref|YP_003237753.1| hemolysin D [Escherichia coli O111:H- str. 11128]
 gi|257767831|dbj|BAI39323.1| hemolysin D [Escherichia coli O111:H- str. 11128]
          Length = 479

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 67/429 (15%), Positives = 151/429 (35%), Gaps = 6/429 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++         +    ++ +I  +  S+L  +E+   ++G+  +     EIK   + I++
Sbjct: 49  IETPVSRRSHFVVWSILLFVIISLLLSVLGKVEVVSVANGKFTHSGRSKEIKPIENAIVE 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K  V++GS + +  PL+          I   + S+   +       + L     + ++ E
Sbjct: 109 KIMVKDGSFVKKNDPLVELTVPGVESDILKSEASLLYEKTE-QYRYAILSESIQRNELPE 167

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                      +  G++    S +      +       K   +    + R     + SL 
Sbjct: 168 IRITDFPGGEDNAGGEHFQRVSSLIKEQFMTWQNRKNQKQLTLNKKIVERDAALARVSLY 227

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +S   + L   K L  K AVSQ+ + +QE    ++  E    + +   + + I  + 
Sbjct: 228 EHQVSQEGRKLNDFKYLLNKKAVSQHSVMEQENSYIQAKNEHAVWLAQVSQLEKEIELVR 287

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  LE   +  EI     ++         +L    + +    I +P++GT+      + 
Sbjct: 288 EELALETNIFRSEIIEKHRKSTDNIVLLEHELEKNRQRKASSFIKAPVSGTVQELNIHTE 347

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP + +  + A V  K I  ++ G    ++   Y   R       ++
Sbjct: 348 GGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQPGQEVIIKVDAYPYTRHGYLTGKVK 407

Query: 369 KIDPIISQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            I        +       + VI+ +   D+      I +  G            ++   +
Sbjct: 408 NITADSVSVPDTGLV---FNVIISVDRNDIQGERKKIPVTAGMTVMAEIKTGVRSVISYL 464

Query: 427 IHPITDNWP 435
           + P+ +   
Sbjct: 465 LSPLKETIN 473


>gi|212633884|ref|YP_002310408.1| type I secretion membrane fusion protein, HlyD [Shewanella
           piezotolerans WP3]
 gi|212555368|gb|ACJ27822.1| Type I secretion membrane fusion protein, HlyD [Shewanella
           piezotolerans WP3]
          Length = 469

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 66/432 (15%), Positives = 149/432 (34%), Gaps = 3/432 (0%)

Query: 4   FMWKNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                ++   P  L R +    ++ ++  I W+ L  + I  S+ G+I+    V +I+  
Sbjct: 31  PAALEIQEPPPNPLARKLGWSLLVLLVIAIVWACLGEVNIVASAEGKIIPSSKVKQIQPL 90

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
              ++K   V  G  + QG PL+  +   TT         + + R  +   ++ L  L  
Sbjct: 91  EKAVVKNILVREGQYVHQGEPLIELDSTLTTADEKRLSGELHSARLSLAGSQALLVMLAQ 150

Query: 123 KYDVLEKAFESRE-EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
             +    A  S +   + +      +   ++            +M  + +      +   
Sbjct: 151 DVNDTNIALVSLDFPHVPNATQVELALHKRLLWQQWLQYRAQWQMLQSNLLQTQAEQAAS 210

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +     L  +L    K  + MK L ++N  S+ND    E+   + T +L       K + 
Sbjct: 211 DEVIGKLEQILPIITKRTSTMKGLHKQNYASENDYLALEQERIQYTHDLAAEHQRLKQLQ 270

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
              +E+  + N   A         + Q Q+  A    +L       +++ + +P++G + 
Sbjct: 271 ASESEVRQQFNTLKAQTSVTELTKIPQIQQQIASLQEELAKAVDRNKKQVLYAPVSGQVQ 330

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +      ++Q LM IVP   L  +   +  K I  V++   A ++   +   +  
Sbjct: 331 ELSIGTVGGVVTEAQQLMLIVPDEVLLDVEVFLDNKDIGFVREKMLAEIKIHTFPFTKYG 390

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                +  +    +  +          + +K + +      I+L  G             
Sbjct: 391 IIDGEVISVSNDATVDEQRGLIYGM-RLKMKQSTIMVEGKEIKLMPGMAVTAEVQTGKRH 449

Query: 422 LAQEIIHPITDN 433
           + +  + P+   
Sbjct: 450 IIEFFMAPLLRY 461


>gi|330960763|gb|EGH61023.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 473

 Score =  234 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 130/393 (33%), Gaps = 6/393 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I++  ++SG+I+       I+S  + ++K   V +G  +  G  LL  +       + 
Sbjct: 76  GKIDVVATASGKIIPSGKTKTIQSSETAVVKAIHVRDGQSVKAGQLLLELDSTSADADVG 135

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  +   R       + LD +N +     K        +LD    +     +      
Sbjct: 136 RVRSDLLAARIDSARAAAMLDAINQR-----KPPRDLTGTILDADPMHVLAAERWLQGQY 190

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                SL +    ++    +      +   L+  L    K     +NL +K  ++++   
Sbjct: 191 QEYRSSLDLVDAEIQQRQADIQAARIQVMSLQKTLPIATKLAGDYENLLKKQYIARHAYL 250

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           ++E+       +L               E         A   + +   L+Q  +  +   
Sbjct: 251 EKEQARLDLERQLSVQQASVLQSTAARQEAERRREGVVAQTRRAMLDLLQQADQKISSFN 310

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
             LT      +  T+ +P+ GT+      +       +QPLM +VP  +   + A +  K
Sbjct: 311 QDLTKARYQEDLTTLEAPVDGTVQQLAVHTVGGVVTPAQPLMVLVPDGQPVEVEAMLENK 370

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  V+ G   TV+   +   +    +  +  +     + +         ++ L    L 
Sbjct: 371 DVGFVRAGQPVTVKVETFTFTKYGTIEGEVISVSNDAIEDEKRGLIYSS-KIRLNSDTLN 429

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +  +I+L  G             + +  + P+
Sbjct: 430 VNGVDIKLSPGMAVTAEVKTNKRRVIEYFLSPL 462


>gi|298486725|ref|ZP_07004781.1| HlyD family secretion protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298158592|gb|EFH99656.1| HlyD family secretion protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 473

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 133/393 (33%), Gaps = 6/393 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I++  ++SG+I+       I+S  + ++K   V +G  +  G  LL  +       + 
Sbjct: 76  GKIDVVATASGKIIPSGKTKTIQSSETAVVKAIHVRDGQSVKAGQLLLELDSTSADADVG 135

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  +   R       + LD +N +     K        +LD    +     +      
Sbjct: 136 RVRSDLLAARIDSARAAAMLDAINQR-----KPPRDLTGTILDADPMHVLAAERWLQGKY 190

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                SL +    ++    +      + + L+  L    K  +  +NL +K  ++++   
Sbjct: 191 QEYRSSLDLVDAEIQQRQADIQAARIQVTSLQKTLPIATKLASDYENLLKKQYIARHAYL 250

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           ++E+       +L               E         A   + +   L+Q  +  A   
Sbjct: 251 EKEQARLDLERQLSVQQASVLQSTAARQEAERRREGVVAQTRRAMLDLLQQADQKIASFN 310

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
             LT      +  T+ +P+ GT+      +       +QPLM +VP  +   + A +  K
Sbjct: 311 QDLTKARYQEDLTTLEAPVDGTVQQLAVHTVGGVVTPAQPLMVLVPDGQPVEVEAMLENK 370

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  V+ G   TV+   +   +    +  +  +     + +         ++ L    L+
Sbjct: 371 DVGFVRAGQPVTVKVETFTFTKYGTIEGEVISVSNDAIEDEKRGLIYSS-KIRLNSDTLS 429

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +  +I+L  G             + +  + P+
Sbjct: 430 VNGVDIKLSPGMAVTAEVKTNKRRVIEYFLSPL 462


>gi|37525298|ref|NP_928642.1| RTX toxin ABC transporter protein (MFP) RtxD [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36784725|emb|CAE13625.1| RTX toxin ABC transporter protein (MFP) RtxD [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 451

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 66/431 (15%), Positives = 157/431 (36%), Gaps = 12/431 (2%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L +  P+   R T +++ IGII  + W+ L  +++  +++G ++       I++     
Sbjct: 28  ALSQRPPSPFARYTAITLSIGIIMALLWAYLGKLDVQATATGRLIVSGRSQIIQAYEQSR 87

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+NG ++ +  PLLT   +     I      I+         ++  +    +   
Sbjct: 88  VTAIHVQNGQRVEKDAPLLTLNTLGVNQDITRLLKQIEYQAHEKIRYQALTEE---QEPT 144

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            ++ F++        +   +S   + +   ++++   + + L+  +S        ++  +
Sbjct: 145 KQELFQALPVSQQTQVADNYSREKREYEAVVTNLKAEMNVNLSSQQSR-------KSDIN 197

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L  L  +  + L   + L +K  +S+ +  +QE+   ++   + +   E   +      
Sbjct: 198 ALTKLRQNISQRLKARQTLSQKQVISKVEYLEQEKEFLETERLIAQQNAEFHVLQSQYIS 257

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L +  N       +E     +Q +        +L   +   + + I SP+ GT+      
Sbjct: 258 LEERLNSLKTQKEREWFDKRKQAEVQLVVLEQELAKAQVREQLEVIRSPVTGTVQQLSVH 317

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q +Q LM IVP   +     ++  K    V  G   T++   +   R       
Sbjct: 318 TLGAVLQPAQNLMVIVPDDNVQLAEVQILNKDAGFVYSGQQVTIKVDAFPYTRYGTIDGE 377

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  I    +  +         +V LK   +A  D  +E+  G             +   +
Sbjct: 378 LLSISRDSTTDEQLGLVFP-AQVSLKRNSIAIDDTQVEITPGMSIVAEIKTDQRRVIDYL 436

Query: 427 IHPITDNWPKI 437
           + PI +   + 
Sbjct: 437 LSPIREYQSEA 447


>gi|148975023|ref|ZP_01812003.1| hypothetical protein VSWAT3_25899 [Vibrionales bacterium SWAT-3]
 gi|145965532|gb|EDK30781.1| hypothetical protein VSWAT3_25899 [Vibrionales bacterium SWAT-3]
          Length = 457

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 60/425 (14%), Positives = 156/425 (36%), Gaps = 9/425 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +   +L  + ++G + WSI+  + I  S++G+++       ++    G ++
Sbjct: 34  VERPASPLARTSAMLITVLLVGTLIWSIVGQLGIHASATGQVIVSGRSKFVQPVSQGEVR 93

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V++G  + +G  L+          +          +  +   ++       K   + 
Sbjct: 94  DILVKDGQHVEKGEILIRLNPTGAKAELARVTSQYHYTQMELARYRAL-----TKGQGVS 148

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            A  +  E +   L +      +     I +   S+  +L   R+ Y      + +   L
Sbjct: 149 MAQFAIPEGISSVLVEASKAALQSDVLEIRAQMESVDAELAVNRANYKA---TKAEIRSL 205

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             LL +    L+  + L EK +++Q ++ + E+ +  +    ++ +     +    ++L 
Sbjct: 206 ETLLKNVTTRLSARQKLAEKKSIAQMEVMELEKELLDNQRSKQQQLSRLNVLNAEQDKLM 265

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           ++ +   A   KE    L + +   A+   +L  + +    + +++P++GTI   Q+ + 
Sbjct: 266 EQKDTYLATKRKEFQSKLNELEGKQAELRQELVKVSEANRLQQLIAPVSGTIQQLQANTQ 325

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q ++ LM IVP   L  I   +  K +  V  G  A V+   +   +       + 
Sbjct: 326 GGVVQAAEKLMVIVPDDALLDIEVMLLNKDVGFVVPGQIAEVKVDTFPYTKYGTLSGTVI 385

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +     + +          + L    +      + ++ G             + + ++ 
Sbjct: 386 TVSRDAVKDEKLGLVFP-ARIRLAQNTIDIEGRQVAIQPGMSVVAEIKTGKRRVIEYLLS 444

Query: 429 PITDN 433
           P+   
Sbjct: 445 PLQQY 449


>gi|15677583|ref|NP_274740.1| putative secretion protein [Neisseria meningitidis MC58]
 gi|7226993|gb|AAF42082.1| putative secretion protein [Neisseria meningitidis MC58]
 gi|316985749|gb|EFV64694.1| leukotoxin secretion protein D [Neisseria meningitidis H44/76]
 gi|325127197|gb|EGC50140.1| leukotoxin secretion protein D [Neisseria meningitidis N1568]
 gi|325199673|gb|ADY95128.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis H44/76]
 gi|325204694|gb|ADZ00148.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M01-240355]
          Length = 475

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 62/440 (14%), Positives = 147/440 (33%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  +        P    R  +   +     + WS    I+I  ++SG+ ++      I+ 
Sbjct: 43  HLELTDTPVSAAPKWAARFIMAFALL---ALLWSWFGKIDIVAAASGKTVSGGRSKTIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  + QG  L   E + T   +   + +++  +      ++ L  L 
Sbjct: 100 LETAVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALE 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++        ++R   L D   +     ++   +   +         + +R         
Sbjct: 160 SRTVPHIDMAQARSLGLSDADVQSAQVLAQ---HQYQAWAAQDAQLQSALRGHQAELQSA 216

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L ++ +  Q+     + L   N +S++   +Q+     +  +L     + + + 
Sbjct: 217 KAQEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +      L   N  ++    L Q          +    ++ ++  TI SP  GT+ 
Sbjct: 277 AAIAQAEQNRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +++     Q +Q +M I P      +   V  K I  V++G  A V+   +   R  
Sbjct: 337 ELATYTVGGVVQAAQKMMVIAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPYTRYG 396

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
                ++ +       +   Q    Y  ++ +    L      + L  G           
Sbjct: 397 YLTGKVKSVSHDAVSHE---QLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIKTGK 453

Query: 420 TTLAQEIIHPITDNWPKIFE 439
             +   ++ P+     + F 
Sbjct: 454 RRVLDYLLSPLQTKLDESFR 473


>gi|296273031|ref|YP_003655662.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
 gi|296097205|gb|ADG93155.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
          Length = 440

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 79/431 (18%), Positives = 164/431 (38%), Gaps = 12/431 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L       L  +     I ++ +I W  +  I++   + G+ +    +V I+     II 
Sbjct: 16  LSHRPAKMLWMIPTFIGILVVMIILWLTISQIDVIAPAQGKTIPNSRMVLIQPKDISIID 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K  V+NG  + +G  L+ F+D     + + +  S+     ++  EK    FL+N    ++
Sbjct: 76  KIYVKNGQSVKKGDLLVDFKD----KIENFENNSVNAKYKNLIAEKL---FLDNYISYIK 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               S+     D      +  +   +  IS+          +++ I   +  +E++ S  
Sbjct: 129 TKKISKISSNKDLPLGILAMVNSKLSTNISAYENDTLSFQMKIQKIDFEKKMVESELSKQ 188

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           + LL   + +L  +K L  K   S+  L   E+   K   +++  I E+  +   +N   
Sbjct: 189 QKLLPYTKHNLEQLKELVLKGYESEMSLQDMEKEYIKEDEDIKIKIAEKNKLQAQLNISK 248

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E      N LK++ +   +          ++         K+I + + GTI    + + 
Sbjct: 249 KELEQFKNNTLKDLLKRENEVSNELTTLEPEVDKSNYILGTKSIKATVDGTIYNLTNSNK 308

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q  + +MK++P++    + AKV  K I  +  G    V+   +   +    +  + 
Sbjct: 309 DKVVQSGEVIMKLIPNNTPLEVEAKVLNKDIGFISIGQKVKVKLDSFKFTKYGYIEGEVI 368

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEI 426
            I+      +   +  E Y VI++++      +N  I+L  G    V        L   I
Sbjct: 369 NIEKASILDE---KLGEIYPVIIRLSTDIMKVDNKFIKLIPGMTCSVDIKIGKRRLIDYI 425

Query: 427 IHPITDNWPKI 437
           I P+     + 
Sbjct: 426 ISPMIRYKDEA 436


>gi|21242936|ref|NP_642518.1| hemolysin secretion protein D [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21108437|gb|AAM37054.1| hemolysin secretion protein D [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 491

 Score =  233 bits (594), Expect = 5e-59,   Method: Composition-based stats.
 Identities = 68/423 (16%), Positives = 139/423 (32%), Gaps = 11/423 (2%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           HPA  +R+  L +      + WSI   I+I   + G I+  D    ++   + ++++  V
Sbjct: 64  HPAP-RRLAWLVMALFAIALVWSIFGRIDIVAVAPGRIIVSDRTKLVQPLENSVVRRVLV 122

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  +  G PLL  +             + +         ++    L  +     K   
Sbjct: 123 REGDHVEAGQPLLELDPTAAHADRTSFGEAHRAAESESLRVRALQATLAGEAGPGTKLPR 182

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI-YLNRLDLENKSSLLRAL 191
              + +         T ++       S   +   +L   R         +    + L   
Sbjct: 183 WSPQDIPAAWSARERTDAQAQLLAEWSDITARTARLDAERQRREAEIATVRAMVAKLETT 242

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L   ++     + L  +  +S +    + R      +E+  ++  Q+  L+       EA
Sbjct: 243 LPVVRQREADFQTLAAQGFMSGHATQDRMRE----RVEMERDLATQQARLQEALATLAEA 298

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSK----LTILEKTREQKTILSPIAGTIVYNQSFS 307
                +YL E  R L + Q     +  +    L+  E+     T+ +P++GT+    + +
Sbjct: 299 RQARMSYLAETRRALSERQAQADLKREQNAQELSKAERRERLATLAAPVSGTVQQLAAHT 358

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                 ++Q LM IVP          +  K I  V+ G   T++   +   R     A +
Sbjct: 359 EGGVVTEAQVLMVIVPDGAQVSAEVTLENKDIGFVEPGQDVTIKLETFPFTRYGTVPAQV 418

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
           E +       +          + L    +A    +I L  G             +   ++
Sbjct: 419 ETVTRDAVNDEKRGAIFP-ALLRLGTGHIAVDGKDIRLAPGMNLTAEIKTGQRRVIDYLL 477

Query: 428 HPI 430
            PI
Sbjct: 478 SPI 480


>gi|308389855|gb|ADO32175.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis alpha710]
 gi|325130786|gb|EGC53521.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis OX99.30304]
 gi|325135677|gb|EGC58291.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M0579]
 gi|325201612|gb|ADY97066.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M01-240149]
 gi|325208652|gb|ADZ04104.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis NZ-05/33]
          Length = 475

 Score =  232 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 62/440 (14%), Positives = 147/440 (33%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  +        P    R  +   +     + WS    I+I  ++SG+ ++      I+ 
Sbjct: 43  HLELTDTPVSAAPKWAARFIMAFALL---ALLWSWFGKIDIVAAASGKTVSGGRSKTIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  + QG  L   E + T   +   + +++  +      ++ L  L 
Sbjct: 100 LETAVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALE 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++        ++R   L D   +   +   +  +   +         + +R         
Sbjct: 160 SRTVPHIDMAQARSLGLSDADVQ---SVQVLAQHQYQAWAAQDAQLQSALRGHQAELQSA 216

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L ++ +  Q+     + L   N +S++   +Q+     +  +L     + + + 
Sbjct: 217 KAQEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +      L   N  ++    L Q          +    ++ ++  TI SP  GT+ 
Sbjct: 277 AAIAQAEQNRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +++     Q +Q +M I P      +   V  K I  V++G  A V+   +   R  
Sbjct: 337 ELATYTVGGVVQAAQKMMVIAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPYTRYG 396

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
                ++ +       +   Q    Y  ++ +    L      + L  G           
Sbjct: 397 YLTGKVKSVSHDAVSHE---QLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIKTGK 453

Query: 420 TTLAQEIIHPITDNWPKIFE 439
             +   ++ P+     + F 
Sbjct: 454 RRVLDYLLSPLQTKLDESFR 473


>gi|51596496|ref|YP_070687.1| RTX toxin ABC transporter [Yersinia pseudotuberculosis IP 32953]
 gi|153947202|ref|YP_001400865.1| type I secretion membrane fusion protein, HlyD family protein
           [Yersinia pseudotuberculosis IP 31758]
 gi|170024238|ref|YP_001720743.1| HlyD family type I secretion membrane fusion protein [Yersinia
           pseudotuberculosis YPIII]
 gi|51589778|emb|CAH21408.1| putative ABC associated RTX toxin transporter, HlyD/MFP family
           [Yersinia pseudotuberculosis IP 32953]
 gi|152958697|gb|ABS46158.1| type I secretion membrane fusion protein, HlyD family protein
           [Yersinia pseudotuberculosis IP 31758]
 gi|169750772|gb|ACA68290.1| type I secretion membrane fusion protein, HlyD family [Yersinia
           pseudotuberculosis YPIII]
          Length = 456

 Score =  232 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 60/429 (13%), Positives = 145/429 (33%), Gaps = 11/429 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R   L I+ ++ ++ W+I+  ++I  S+SG+++  ++   I+    G++ 
Sbjct: 35  VERPIAPLARRTAWLLILTLLLVLIWAIIGKLDIHASASGKVIVAEHSKIIQPAEPGVVT 94

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V +G  +  G  L+    I     +      ++     ++  +      +      +
Sbjct: 95  EINVRDGDTVDAGQVLIALNPIGIDAEVRNINQQLQYR--QLEAARLVALLADEPLKNFK 152

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             + S E  ++            +     + V   L  + + +     +       +S  
Sbjct: 153 PPYNSPESLVV--------ASRALLTKEYAEVTAELSRQDSELAVNQAHLQAGIEHNSHQ 204

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +ALL +  + L   + L +  ++++ +L  QER    +T E      EQ  +    + L 
Sbjct: 205 KALLKNIHRRLQASRTLAKSKSIAEVELLVQEREWLTATAEANRLQSEQDILRAKAHSLA 264

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A   ++    L +          +   +   + Q+T+ +P+AG I      + 
Sbjct: 265 QTRMHYLAKIDRDNRERLNKTHEIIHQLQQEQIKMMDKQRQQTLRAPVAGVIQQLAVHTL 324

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP      +   +  K +  V  G    V+   +   R       ++
Sbjct: 325 GGVVTTAQPLMVLVPEDYQLELDVMILNKDVGFVLPGQAVEVKVDSFPYTRFGTLSGEVK 384

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +     +            + L    L      + L  G             +   ++ 
Sbjct: 385 HVSRDAMEDQQRGLVFP-ARIRLLSDTLMVEGKPVRLSAGMAINAEIKTGRRRVIDYLLS 443

Query: 429 PITDNWPKI 437
           P+     + 
Sbjct: 444 PLQQYQSEA 452


>gi|123210|sp|P06739|HLYDP_ECOLX RecName: Full=Hemolysin secretion protein D, plasmid
 gi|150684|gb|AAA98235.1| hemolysin D [Escherichia coli]
 gi|225076|prf||1208296D hemolysin hlyD
          Length = 478

 Score =  232 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 67/420 (15%), Positives = 153/420 (36%), Gaps = 7/420 (1%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +    +  ++     S+L  +EI  +++G++ +     EIK   + I+K+  V+ G  
Sbjct: 58  RLVAYFIMGFLVIAFILSVLGQVEIVATANGKLTHSGRSKEIKPIENSIVKEIIVKEGES 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  LL           D  K     L+  ++  +  +   + + + L +     E  
Sbjct: 118 VRKGDVLLKL--TALGAEADTLKTQSSLLQARLEQTRYQILSRSIELNKLPELKLPDEPY 175

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             +   +     + +     S+       K   +      RL +  + +    L    + 
Sbjct: 176 FQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTVLARINRYENLSRVEKS 235

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L    +L  K A++++ + +QE    ++  ELR    + + +   I    +E  L    
Sbjct: 236 RLDDFSSLLHKQAIAKHAVLEQENKYVEAVNELRVYKSQLEQIESEILSAKEEYQLVTQL 295

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  EI   L Q          +L   E+ ++   I +P++  +   +  +       ++ 
Sbjct: 296 FKNEILDKLRQTTDNIGLLTLELAKNEERQQASVIRAPVSVKVQQLKVHTEGGVVTTAET 355

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM IVP      + A V  K I  +  G  A ++   +   R       ++ I+    + 
Sbjct: 356 LMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVKNINLDAIED 415

Query: 378 DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
                    + VI+ I +  L+  + NI L +G            ++   ++ P+ ++  
Sbjct: 416 QRLGLV---FNVIISIEENCLSTGNKNIPLSSGMAVTAEIKTGMRSVISYLLSPLEESVT 472


>gi|73853296|ref|YP_308792.1| hemolysin D [Escherichia coli]
 gi|73476880|gb|AAZ76495.1| Hemolysin D [Escherichia coli]
          Length = 479

 Score =  232 bits (593), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 65/429 (15%), Positives = 149/429 (34%), Gaps = 6/429 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++         +    ++ +I  +  S+L  +E+   ++G+  +     EIK   + I++
Sbjct: 49  IETPVSRRSHFIIWSILLFVIISLLLSVLGKVEVVSVANGKFTHSGRSKEIKPIENAIVE 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K  V++GS + +  PL+          I   + S+   +       + L     + ++ E
Sbjct: 109 KIMVKDGSFVKKNDPLVELTVPGVESDISKSEASLLYEKTE-QYRYAILSESIQRNELPE 167

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                      +  G++    S +      +       K   +    + R     + SL 
Sbjct: 168 IRITDFPGGEDNAGGEHFQRVSSLIKEQFMTWQNRKNQKQLTLNKKIVERDAALARVSLY 227

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +S   + L   K L  K AVSQ+ + +QE    ++  E    + +   + + I  + 
Sbjct: 228 EHQVSQEGRKLNDFKYLLNKKAVSQHSVMEQENSYIQAKNEHAVWLAQVSQLEKEIELVR 287

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  LE   +  EI     ++         +L    + +    I +P++GT+      + 
Sbjct: 288 EELALETNIFRSEIIEKHRKSTDNIVLLEHELEKNRQRKASSFIKAPVSGTVQELNIHTE 347

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP + +  + A V  K I  ++ G    ++   Y   R       ++
Sbjct: 348 GGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQAGQEVVIKVDAYPYTRHGYLTGKVK 407

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEI 426
            I        +       + VI+ +           + +  G            ++   +
Sbjct: 408 NITADSVSVPDTGLV---FNVIISVDRNDIQGEIKKMPVTAGMTVMAEIKTGVRSVISYL 464

Query: 427 IHPITDNWP 435
           + P+ +   
Sbjct: 465 LSPLKETIN 473


>gi|332294946|ref|YP_004436869.1| type I secretion membrane fusion protein, HlyD family
           [Thermodesulfobium narugense DSM 14796]
 gi|332178049|gb|AEE13738.1| type I secretion membrane fusion protein, HlyD family
           [Thermodesulfobium narugense DSM 14796]
          Length = 432

 Score =  232 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 67/402 (16%), Positives = 148/402 (36%), Gaps = 18/402 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + +++ VS+ G+++ + +V  ++S  +G+++K  V+ G  + +G  L+  +       
Sbjct: 41  YFVKVDVVVSAKGKVIPDGDVKVLQSFETGVVRKILVKEGDYVKKGQVLVEIDPTIEAAD 100

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           I  K+ +   L       ++ L           K FE  E      L        +++  
Sbjct: 101 IQGKEKNYNYLNLSEKRVEALLTG---------KPFEVSENDPQSLL------QRELYRS 145

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
              +   SLK K  +M       L L+++   L  LLS   ++   +K L E  AV++  
Sbjct: 146 QKQAYESSLKQKEKQMEETSSAMLSLKDEVKSLERLLSISSEEEKRLKALAEAGAVAEAR 205

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              + +       E+     + +     + EL  E     + + +++  +     +    
Sbjct: 206 YRDKVKERLNLEKEIGVKSSQIEESAIRLEELRQEIEAIRSGFAEKLLEEAGSGAQQENL 265

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             S++T  +    ++ + SP+ G +      +S       QP++ IVP      ++A V 
Sbjct: 266 LKSEITTAKFKESKRLLTSPVDGYVHLIAIKTSGGVVTPGQPIISIVPEDTPLVVKAMVL 325

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN-NLQTQEYYEVILKIT 394
            K I  VK+     ++   Y   +    K  +  + P   +     +     Y V +  T
Sbjct: 326 NKDIGFVKEEQKVVLKIDTYDFQKYGTIKGFVSVVSPDSIEDKELKVDGYPVY-VKMNST 384

Query: 395 DLAFSDNNI-ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
            L   +  + +++ G             + +  + P   N  
Sbjct: 385 QLQTKEGKVYKIKPGMNVLAEINIGKRRIIELFLSPFIKNID 426


>gi|261392042|emb|CAX49532.1| putative FrpA/C secretion adaptor protein [Neisseria meningitidis
           8013]
          Length = 475

 Score =  232 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 62/440 (14%), Positives = 147/440 (33%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  +        P    R  +   +     + WS    I+I  ++SG+ ++      I+ 
Sbjct: 43  HLELTDTPVSAAPKWAARFIMAFALL---ALLWSWFGKIDIVAAASGKTVSGGRSKTIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  + QG  L   E + T   +   + +++  +      ++ L  L 
Sbjct: 100 LETAVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALE 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++        ++R   L D   +     ++   +   +         + +R         
Sbjct: 160 SRTVPHIDMAQARSLGLSDADVQSAQVLAQ---HQYQAWAAQDAQLQSALRGHQAELQSA 216

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L ++ +  Q+     + L   N +S++   +Q+     +  +L     + + + 
Sbjct: 217 KAQEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +      L   N  ++    L Q          +    ++ ++  TI SP  GT+ 
Sbjct: 277 AAIAQAEQSRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +++     Q +Q +M I P      +   V  K I  V++G  A V+   +   R  
Sbjct: 337 ELATYTVGGVVQVAQKMMVIAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPYTRYG 396

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
                ++ +       +   Q    Y  ++ +    L      + L  G           
Sbjct: 397 YLTGKVKSVSHDAVSHE---QLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIKTGK 453

Query: 420 TTLAQEIIHPITDNWPKIFE 439
             +   ++ P+     + F 
Sbjct: 454 RRVLDYLLSPLQTKLDESFR 473


>gi|1247761|emb|CAA60044.1| EHEC-hlyD [Escherichia coli]
          Length = 479

 Score =  232 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 67/429 (15%), Positives = 150/429 (34%), Gaps = 6/429 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++         +    ++ +I  +  S+L  +E+   ++G+  +     EIK   + I++
Sbjct: 49  IETPVSRRSHLVVWSILLFVIISLLLSVLGKVEVVSVANGKFTHSGRSKEIKPIENAIVE 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K  V++GS + +  PL+          I   + S+   +       + L     + ++ E
Sbjct: 109 KIMVKDGSFVKKNDPLVELTVPGVESDILKSEASLLYEKTE-QYRYAILSESIQRNELPE 167

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                      +  G++    S +      +       K   +    + R     + SL 
Sbjct: 168 IRITDFPGGEDNAGGEHFQRVSSLIKEQFMTWQNRKNPKQLTLNKKIVERDAALARVSLY 227

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +S   + L   K L  K AVSQ+ + +QE    +   E    + +   + + I  + 
Sbjct: 228 EHQVSQEGRKLNDFKYLLNKKAVSQHSVMEQENSYIQPKNEHAVWLAQVSQLEKEIELVR 287

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  LE   +  EI     ++         +L    + +    I +P++GT+      + 
Sbjct: 288 EELALETNIFRSEIIEKHRKSTDNIVLLEHELEKNRQRKASSFIKAPVSGTVQELNIHTE 347

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP + +  + A V  K I  ++ G    ++   Y   R       ++
Sbjct: 348 GGVVTTAETLMIIVPDNDILEVTASVLNKDIGFIQPGQEVVIKVDAYPYTRHGYLTGKVK 407

Query: 369 KIDPIISQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            I        +       + VI+ +   D+      I +  G            ++   +
Sbjct: 408 NITADSVSVPDTGLV---FNVIISVDRNDIQGERKKIPVTAGMTVMAEIKTGVRSVISYL 464

Query: 427 IHPITDNWP 435
           + P+ +   
Sbjct: 465 LSPLKETIN 473


>gi|193070443|ref|ZP_03051384.1| leukotoxin secretion protein D [Escherichia coli E110019]
 gi|192956262|gb|EDV86724.1| leukotoxin secretion protein D [Escherichia coli E110019]
          Length = 478

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 67/429 (15%), Positives = 153/429 (35%), Gaps = 7/429 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++       + +    +  ++     S+L  +EI  +++G++ +     EIK   + I+K
Sbjct: 49  IETPVSRRPRLVAYFIMGFLVIAFILSVLGQVEIVATANGKLTHSGRSKEIKPIENSIVK 108

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G    +G  LL           D  K     L+  ++  +  +   + + + L 
Sbjct: 109 EIIVKEGESARKGDVLLKL--TALGAEADTLKTQSSLLQARLEQTRYQILSRSIELNKLP 166

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +     E    +   +     + +     S+       K   +      RL +  + +  
Sbjct: 167 ELKLPEEPYFQNVSEEEVLRLTSLIKEQFSTWQNQKYQKELNLDKKRAERLTVLARINRY 226

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             L    +  L    +L  K A++++ + +QE    ++  ELR    + + +   I    
Sbjct: 227 ENLSRVEKSRLDDFSSLLHKQAIAKHAVLEQENKYVEAVNELRVYKSQLEQIESEILSAK 286

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +E  L    +  EI   L Q          +L   E+ ++   I +P++G +   +  + 
Sbjct: 287 EEYQLVTQLFKNEILDKLRQTTDNIGLLTLELAKNEERQQASVIRAPVSGKVQQLKVHTE 346

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 ++ LM IVP      + A V  K I  +  G  A ++   +   R       ++
Sbjct: 347 GGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAIIKVEAFPYTRYGYLVGKVK 406

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            I+    +          + VI+ I +      + NI L +G            ++   +
Sbjct: 407 NINLDAIEDQRLGLV---FNVIISIEENGLSTGNKNISLSSGMAVTAEIKTGMRSVISYL 463

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 464 LSPLEESVT 472


>gi|304386778|ref|ZP_07369045.1| HlyD family type I secretion membrane fusion protein [Neisseria
           meningitidis ATCC 13091]
 gi|254670581|emb|CBA06488.1| hemolysin secretion protein D [Neisseria meningitidis alpha153]
 gi|304339128|gb|EFM05215.1| HlyD family type I secretion membrane fusion protein [Neisseria
           meningitidis ATCC 13091]
          Length = 475

 Score =  232 bits (592), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 61/440 (13%), Positives = 147/440 (33%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  +        P    R  +   +     + WS    I+I  ++SG+ ++      I+ 
Sbjct: 43  HLELTDTPVSAAPKWAARFIMAFALL---ALLWSWFGKIDIVAAASGKTVSGGRSKTIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  + QG  L   E + T   +   + +++  +      ++ L  L 
Sbjct: 100 LETAVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALE 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++        ++R   L D   +     ++   +   +         + +R         
Sbjct: 160 SRTVPHIDMAQARSLGLSDADVQSAQVLAQ---HQYQAWAAQDAQLQSALRGHQAELQSA 216

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L ++ +  Q+     + L   N +S++   +Q+     +  +L     + + + 
Sbjct: 217 KAQEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +      L   N  ++    L Q          +    ++ ++  TI SP  GT+ 
Sbjct: 277 AAIAQAEQSRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +++     Q +Q +M + P      +   V  K I  V++G  A V+   +   R  
Sbjct: 337 ELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAMVKIESFPYTRYG 396

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
                ++ +       +   Q    Y  ++ +    L      + L  G           
Sbjct: 397 YLTGKVKSVSHDAVSHE---QLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVSAEIKTGK 453

Query: 420 TTLAQEIIHPITDNWPKIFE 439
             +   ++ P+     + F 
Sbjct: 454 RRVLDYLLSPLQTKLDESFR 473


>gi|325267643|ref|ZP_08134295.1| HlyD family type I secretion membrane fusion protein [Kingella
           denitrificans ATCC 33394]
 gi|324980993|gb|EGC16653.1| HlyD family type I secretion membrane fusion protein [Kingella
           denitrificans ATCC 33394]
          Length = 475

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 61/440 (13%), Positives = 147/440 (33%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  +        P    R  +   +     + WS    I+I  ++SG+ ++      I+ 
Sbjct: 43  HLELTDTPVSAAPKWAARFIMAFALL---ALLWSWFGKIDIVAAASGKTVSGGRSKTIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  + QG  L+  E + T   +   + +++  +      ++ L  L 
Sbjct: 100 LETAVVKAVHVRDGQHVKQGETLVELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALE 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++        ++R   L D   +   +   +      +         + +R         
Sbjct: 160 SRTVPHIDMAQARSLGLSDADVQ---SAQILAQNQYQAWAAQDAQLQSALRGHQAELQSA 216

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L ++ +  Q+     + L   N +S++   +Q+     +  +L     + + + 
Sbjct: 217 KAQEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNRNDLESTRGQMRQIQ 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +      L   N  ++    L Q          +    ++ ++  TI SP  GT+ 
Sbjct: 277 AAIAQAEQNRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +++     Q +Q +M + P      +   V  K I  V++G  A V+   +   R  
Sbjct: 337 ELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPYTRYG 396

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
                ++ +       +   Q    Y  ++ +    L      + L  G           
Sbjct: 397 YLTGKVKSVSHDAVSHE---QLGLVYTAVVSLDKHTLNIDGKTVNLTAGMNVTAEIKTGK 453

Query: 420 TTLAQEIIHPITDNWPKIFE 439
             +   ++ P+     + F 
Sbjct: 454 RRVLDYLLSPLQTKLDESFR 473


>gi|187939501|gb|ACD38650.1| membrane fusion protein cluster 3 protein [Pseudomonas aeruginosa]
          Length = 471

 Score =  232 bits (592), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 60/433 (13%), Positives = 145/433 (33%), Gaps = 11/433 (2%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
               +L+      L R    +I+  + L + W+ L  I++  S+ G+++       I+  
Sbjct: 39  PAALSLQEQPVNPLARHIKWAIMAFLALAVLWACLGEIDVVASAQGKVVPSGKTKVIQPS 98

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
              ++K   V +G Q+  G  L+  +  +TT  ++  K  +      +D+ ++ +     
Sbjct: 99  EVAVVKAIHVYDGQQVKAGDLLVELDGSQTTADVERLKSDLMA--AQVDSARATVLLEAI 156

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +      +  SR  Q  +   +               +  ++      +           
Sbjct: 157 EGGQEPASIASRLPQANEEQQR---AAQVWMQGQYLELRSNINQAQAVIEQRSAEIQAAL 213

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           +  + LR  L   ++     K L  +N V+++   ++E+       EL     +   +  
Sbjct: 214 SMIASLRKTLPIAEQLAQDYKRLLARNFVAKHAWLEKEQSRLDQERELAVQQAKLLELQA 273

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              E         A   + +     ++Q+  A    +L   E+      + +P+ GT+  
Sbjct: 274 SRREAEQRRESIIAQTRRTMLDLQHESQQKSAALTQELLKAEQRDRLTRLTAPVDGTVQQ 333

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +      ++QPLM IVP  +   + A +  K I  V  G    ++   +   +   
Sbjct: 334 LAIHTQGGVVTEAQPLMAIVPKDQPVEVEAMLENKDIGFVGPGQEVEIKVETFTFTKYGV 393

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNT 420
               +  +     + +        Y + +++    +   D  + L  G            
Sbjct: 394 IHGTVLSVSEDAIEDEKRGLL---YGLRIQLAQNHIRVGDREVPLTPGMAVSAEVKTDKR 450

Query: 421 TLAQEIIHPITDN 433
            + +  + P+   
Sbjct: 451 KVIEYFLSPLKQY 463


>gi|186895546|ref|YP_001872658.1| HlyD family type I secretion membrane fusion protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|186698572|gb|ACC89201.1| type I secretion membrane fusion protein, HlyD family [Yersinia
           pseudotuberculosis PB1/+]
          Length = 456

 Score =  232 bits (591), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 60/429 (13%), Positives = 145/429 (33%), Gaps = 11/429 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R   L I+ ++ ++ W+I+  ++I  S+SG+++  ++   I+    G++ 
Sbjct: 35  VERPIAPLARRTAWLLILTLLLVLIWAIIGKLDIHASASGKVIVAEHSKIIQPAEPGVVT 94

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V +G  +  G  L+    I     +      ++     ++  +      +      +
Sbjct: 95  EINVRDGDTVDAGQVLIALNPIGIDAEVRNINQQLQYR--QLEAARLVALLADEPLKNFK 152

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             + S E  ++            +     + V   L  + + +     +       +S  
Sbjct: 153 PPYNSPESLVV--------ASRALLTKEYAEVTAELSRQDSELAVNQAHLQAGIEHNSHQ 204

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +ALL +  + L   + L +  ++++ +L  QER    +T E      EQ  +    + L 
Sbjct: 205 KALLKNIHRRLQASRTLAKSKSIAEVELLVQEREWLTATAEANRLQSEQDILRAKAHSLA 264

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A   ++    L +          +   +   + Q+T+ +P+AG I      + 
Sbjct: 265 QTRMHYLAKIDRDNRERLNKTHEIIHQLQQEQIKMMDKQRQQTLRAPVAGVIQQLAVHTL 324

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP      +   +  K +  V  G    V+   +   R       ++
Sbjct: 325 GGVVTTTQPLMVLVPEDYQLELDVMILNKDVGFVLPGQAVEVKVDSFPYTRFGTLSGEVK 384

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +     +            + L    L      + L  G             +   ++ 
Sbjct: 385 HVSRDAMEDQQRGLVFP-ARIRLLSDTLMVEGKPVRLSAGMAINAEIKTGRRRVIDYLLS 443

Query: 429 PITDNWPKI 437
           P+     + 
Sbjct: 444 PLQQYQSEA 452


>gi|188025796|ref|ZP_02959847.2| hypothetical protein PROSTU_01746 [Providencia stuartii ATCC 25827]
 gi|188020530|gb|EDU58570.1| hypothetical protein PROSTU_01746 [Providencia stuartii ATCC 25827]
          Length = 448

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 77/433 (17%), Positives = 164/433 (37%), Gaps = 16/433 (3%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L ++ P+ L   T + I IGI+  I WS +  ++I  ++ G ++       I++     
Sbjct: 25  ALLKSPPSYLALTTAIIISIGILFAIIWSYIGKLDIQATTQGRLVVSGRTQVIQAFELSR 84

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++   V +G  + QG PLL+   +     I      I   +       + L+ ++     
Sbjct: 85  LQHIYVADGQHVKQGDPLLSVNVLGINQDIHNLNYQIHFQQIEKWVHHALLNQIS----- 139

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                     +LL    +      +       ++   +  ++T  R+ Y  R   E +  
Sbjct: 140 --PELTPEFAKLLPTEQQRLLESYQSLKNEYDALLNEIDNEITLNRTHYSAR---ERELK 194

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +  L+ + QK L   + L  +  +SQ +  +QER +  +  E    + E   +    + 
Sbjct: 195 DVNTLIINIQKRLDAHRVLNNQQLISQKEFLEQERELLMAKKEKTSKLSELAILNSQHSA 254

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L+++ +       +E      Q +        +L   ++  + K I SP+ GT+    ++
Sbjct: 255 LHEKRHRLQTQKTQEWYEKYRQAEFKLVSAEQELLKNQEREQLKIIRSPVDGTVQQLATY 314

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q +Q LM +VP++ +     K+  K I  +++G  ATV+   +   R       
Sbjct: 315 TLGAVLQPAQQLMVVVPNNDVQLAEVKILNKDIGFIREGQLATVKIDAFPYTRYGTIDGE 374

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +  I    +Q +   Q    +   + +   +     N+IEL  G         +   +  
Sbjct: 375 VISISRDSTQDE---QLGLVFLGQIGLKKKSLLVEGNHIELTPGLSVTAEIKTEKRRVID 431

Query: 425 EIIHPITDNWPKI 437
            ++ PI +     
Sbjct: 432 YLLSPIQEYTTTA 444


>gi|4838369|gb|AAD30977.1|AF121772_1 NatD [Neisseria meningitidis]
          Length = 475

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 62/440 (14%), Positives = 147/440 (33%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  +        P    R  +   +     + WS    I+I  ++SG+ ++      I+ 
Sbjct: 43  HLELTDTPVSAAPKWAARFIMAFALL---ALLWSWFGKIDIVAAASGKTVSGGRSKTIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  + QG  L   E + T   +   + +++  +      ++ L  L 
Sbjct: 100 LETAVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALE 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++        ++R   L D   +     ++   +   +         + +R         
Sbjct: 160 SRTVPHIDMAQARSLGLSDADVQSAQVLAQ---HQYQAWAAQDAQLQSALRGHQAELQSA 216

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L ++ +  Q+     + L   N +S++   +Q+     +  +L     + K + 
Sbjct: 217 KAQEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMKQIQ 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +      L   N  ++    L Q          +    ++ ++  TI SP  GT+ 
Sbjct: 277 AAIAQAEQSRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +++     Q +Q +M + P      +   V  K I  V++G  A V+   +   R  
Sbjct: 337 ELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPYTRYG 396

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
                ++ +       +   Q    Y  ++ +    L      + L  G           
Sbjct: 397 YLTGKVKSVSHDAVSHE---QLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIKTGK 453

Query: 420 TTLAQEIIHPITDNWPKIFE 439
             +   ++ P+     + F 
Sbjct: 454 RRVLDYLLSPLQTKLDESFR 473


>gi|163760945|ref|ZP_02168023.1| putative HlyD family secretion protein [Hoeflea phototrophica
           DFL-43]
 gi|162281726|gb|EDQ32019.1| putative HlyD family secretion protein [Hoeflea phototrophica
           DFL-43]
          Length = 457

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 57/424 (13%), Positives = 149/424 (35%), Gaps = 15/424 (3%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           + +    L  + +   + W+   P+    + +GEI+    V  I+    GI+ +  V  G
Sbjct: 43  TARTAIRLVSLALAVFLVWASFAPVTEIATGTGEIVPNGFVQTIQHLEGGIVAELFVREG 102

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            +++QG P+L  +D+ +   +   K     +R  I   + +         V E +     
Sbjct: 103 DRVVQGKPILRMDDLASKAELAKAKSRADGIRLEIA--RRSSKTAVEPVSVFEASL---- 156

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                 L     +         +     +++ L  + +       L  +   +   L   
Sbjct: 157 -----RLSAIAESQQAAALAEDTLHAAQIEVALAEVETRKAELFSLSQREQKMLEELRII 211

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++ L   +  F   AVS+++ ++  R   +    +     ++      +++     +   
Sbjct: 212 ERTLVDFEKAFTAGAVSRSERDKIAREKIQMESSILTVTGQRAAAEAGLSQSQARVDELR 271

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A + +     + + +   A     +  LE   ++  I++P  G I    + +        
Sbjct: 272 AGFRQTAETAIAELEIEAASTEELVRQLEDRLDRTLIVAPETGRIFDLAASNRGQVISPG 331

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + + +I+P  +  Y   K+   QI  +  G  A+V+   +   R     A ++ I     
Sbjct: 332 EQIAQIIPEGQAIYAEVKIPADQIGFISPGMDASVKILTFDYTRFGSIPAKVDSISASSL 391

Query: 376 QQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           +     +   ++ V L++   + ++   +  +++G            T+   ++ P+   
Sbjct: 392 KHS--EEDPPFFNVRLELDKESIANSAQDRPIQSGMSVAADIKLGKKTVMNFLLKPLRSL 449

Query: 434 WPKI 437
             + 
Sbjct: 450 TDRA 453


>gi|254672774|emb|CBA06832.1| hemolysin secretion protein D [Neisseria meningitidis alpha275]
          Length = 475

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 60/440 (13%), Positives = 147/440 (33%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  +        P    R  +   +     + WS    I+I  ++SG+ ++      I+ 
Sbjct: 43  HLELTDTPVSAAPKWAARFIMAFALL---ALLWSWFGKIDIVAAASGKTVSGGRSKTIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  + QG  L   E + T   +   + +++  +      ++ L  L 
Sbjct: 100 LETAVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALE 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++        ++R   L D   +     ++   +   +         + +R         
Sbjct: 160 SRTVPHIDMAQARSLGLSDADVQSAQVLAQ---HQYQAWAAQDAQLQSALRGHQAELQSA 216

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L ++ +  Q+     + L   N +S++   +Q+     +  +L     + + + 
Sbjct: 217 KAQEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +      L   N  ++    L Q          +    ++ ++  TI SP  GT+ 
Sbjct: 277 AAIAQAEQSRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +++     Q +Q +M + P      +   +  K I  V++G  A V+   +   R  
Sbjct: 337 ELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLILNKDIGFVEQGQDAVVKIESFPYTRYG 396

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
                ++ +       +   Q    Y  ++ +    L      + L  G           
Sbjct: 397 YLTGKVKSVSHDAVSHE---QLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIKTGK 453

Query: 420 TTLAQEIIHPITDNWPKIFE 439
             +   ++ P+     + F 
Sbjct: 454 RRVLDYLLSPLQTKLDESFR 473


>gi|121635371|ref|YP_975616.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis FAM18]
 gi|254805486|ref|YP_003083707.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis alpha14]
 gi|6900445|emb|CAB72043.1| HlyD protein [Neisseria meningitidis]
 gi|120867077|emb|CAM10843.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis FAM18]
 gi|157418812|gb|ABV55109.1| secretion protein [Neisseria meningitidis]
 gi|254669028|emb|CBA07459.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis alpha14]
 gi|325131723|gb|EGC54425.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M6190]
 gi|325138857|gb|EGC61408.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis ES14902]
 gi|325142891|gb|EGC65254.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis 961-5945]
 gi|325198829|gb|ADY94285.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis G2136]
          Length = 475

 Score =  231 bits (590), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 61/440 (13%), Positives = 147/440 (33%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  +        P    R  +   +     + WS    I+I  ++SG+ ++      I+ 
Sbjct: 43  HLELTDTPVSAAPKWAARFIMAFALL---ALLWSWFGKIDIVAAASGKTVSGGRSKTIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  + QG  L   E + T   +   + +++  +      ++ L  L 
Sbjct: 100 LETAVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALE 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++        ++R   L D   +     ++   +   +         + +R         
Sbjct: 160 SRTVPHIDMAQARSLGLSDADVQSAQVLAQ---HQYQAWAAQDAQLQSALRGHQAELQSA 216

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L ++ +  Q+     + L   N +S++   +Q+     +  +L     + + + 
Sbjct: 217 KAQEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +      L   N  ++    L Q          +    ++ ++  TI SP  GT+ 
Sbjct: 277 AAIAQAEQSRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +++     Q +Q +M + P      +   V  K I  V++G  A V+   +   R  
Sbjct: 337 ELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPYTRYG 396

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
                ++ +       +   Q    Y  ++ +    L      + L  G           
Sbjct: 397 YLTGKVKSVSHDAVSHE---QLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIKTGK 453

Query: 420 TTLAQEIIHPITDNWPKIFE 439
             +   ++ P+     + F 
Sbjct: 454 RRVLDYLLSPLQTKLDESFR 473


>gi|237745464|ref|ZP_04575944.1| secretion system protein D [Oxalobacter formigenes HOxBLS]
 gi|229376815|gb|EEO26906.1| secretion system protein D [Oxalobacter formigenes HOxBLS]
          Length = 397

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 61/428 (14%), Positives = 132/428 (30%), Gaps = 88/428 (20%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P +   +   ++I  +    W+    ++   ++ G+++   N   ++     II+   
Sbjct: 52  NPPRASFLIIRFTLILFVLAFIWACFSRLDEITTADGKVIPSSN---VQ-----IIQNL- 102

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
              G  + +                                    +  L +K  ++ K  
Sbjct: 103 --EGGIVSE--------------------------------IPIKIGELVHKDQIVMKLD 128

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E+R                  F         S+ +   ++       ++  ++ + L+  
Sbjct: 129 ETR------------------FASSAEETKASISVLQEQVAQREQELVEKRSRLAQLQQS 170

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                K+L M K L ++  VS+ ++ + +R V     E+         +           
Sbjct: 171 YGYINKELQMSKPLLKQGVVSEVEILRLQRQVSDLRGEMDATRLAIPRLQSQ-------- 222

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                         L + +       +  T  +   ++ TI SP+ G I      +    
Sbjct: 223 --------------LNEAKSKLEGATATETAAKDRLDRTTIRSPVEGIIKTIAINTVGGV 268

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q    +M+IVP      I  +V P  +  +K G  ATV+   Y        +A +E I 
Sbjct: 269 IQPGMNVMEIVPVEDNLLIEGRVKPSDVGFLKAGQPATVKISAYDFSIYGGLEAEVENIS 328

Query: 372 PIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                 D     + +Y V ++     L   D  + +  G  A       + ++   ++ P
Sbjct: 329 ADSITNDR---GESFYLVRVRTKKNYLGSDDRPLPIIPGMMATASIKTGSKSIMNYLLKP 385

Query: 430 ITDNWPKI 437
           I     + 
Sbjct: 386 IFKAKTEA 393


>gi|161870585|ref|YP_001599757.1| periplasmic type I secretion system protein [Neisseria meningitidis
           053442]
 gi|161596138|gb|ABX73798.1| periplasmic type I secretion system protein [Neisseria meningitidis
           053442]
          Length = 475

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 61/440 (13%), Positives = 148/440 (33%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  +        P    R  +   +     + WS    I+I  ++SG+ ++      I+ 
Sbjct: 43  HLELTDTPVSAAPKWAARFIMAFALL---ALLWSWFGKIDIVAAASGKTVSGGRSKTIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  + QG  L   E + T   +   + +++  +      ++ L  L 
Sbjct: 100 LETVVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALE 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++        ++R   L D   +     ++   +   +         + +R         
Sbjct: 160 SRTVPHIDMAQARSLGLSDADVQSAQVLAQ---HQYQAWAAQDAQLQSALRGHQAELQSA 216

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L ++ +  Q+     + L   N +S++   +Q+     +  +L     + + + 
Sbjct: 217 KAQEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +      L   N  ++    L Q          ++   ++ ++  TI SP  GT+ 
Sbjct: 277 AAIAQAEQNRVLNTQNLKRDTLDALRQANEQIDQYRGQMDKAKQRQQLMTIQSPADGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +++     Q +Q +M + P      +   V  K I  V++G  A V+   +   R  
Sbjct: 337 ELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPYTRYG 396

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
                ++ +       +   Q    Y  ++ +    L      + L  G           
Sbjct: 397 YLTGKVKSVSHDAVSHE---QLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIKTGK 453

Query: 420 TTLAQEIIHPITDNWPKIFE 439
             +   ++ P+     + F 
Sbjct: 454 RRVLDYLLSPLQTKLDESFR 473


>gi|117618037|ref|YP_855894.1| RTX toxin transporter [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117559444|gb|ABK36392.1| RTX toxin transporter [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 454

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 64/431 (14%), Positives = 150/431 (34%), Gaps = 12/431 (2%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L    P+   R+T L++  G++  + W+    ++I  ++SG +L       I+S     
Sbjct: 31  ALAETPPSPFARITALTLSAGVLLTLLWACWGELDIQATASGRLLVLGRSQMIQSYEQAR 90

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    VE+G  +    PLLT   +  +  +   +         +   +S          +
Sbjct: 91  VVSIHVEDGQAVAADAPLLTLNTLGVSQDLSRLRQQQAFQYQTLIRYQS----------L 140

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                  +    L    +      + +   +   + +L      +     N+       +
Sbjct: 141 YRDQTPDQHPDYLRLTPEQQQALVENYQSELHEFHSTLGNLQAELGVNQANQAARRGDMA 200

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L  LL++ +  L   + L + +A+S+ +  +QE+ + ++  +L +   E + +      
Sbjct: 201 SLTTLLANIRPRLQARQTLSQSHAISRVEYLEQEKELLETQRQLAQQRAELEVLQSQQQS 260

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L +      A   +E     +Q +        +L  L +    + I +P+AGT+      
Sbjct: 261 LQERLAGFKAQKQREWIEKRQQARLQLTAIEQELAKLREREHLEVIRAPVAGTVQQLAIH 320

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q +Q L+ IVP+  +     K+  K I  V +G   +++   +   R       
Sbjct: 321 TQGAVVQPAQQLLVIVPNEGVQLAEVKILNKDIGFVHEGQAVSIKVDAFPYTRYGTIDGE 380

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  +    +  +          V L   ++      ++L  G             +   +
Sbjct: 381 LVSVSRDATADEQLGLVFA-ARVKLSRDEMLIDQQPVKLTPGMSVVAEIKTDRRRVIDYL 439

Query: 427 IHPITDNWPKI 437
           + PI +   + 
Sbjct: 440 LSPIREYQAEA 450


>gi|294013161|ref|YP_003546621.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292676491|dbj|BAI98009.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 463

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 136/398 (34%), Gaps = 12/398 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W     +++  S+ G ++  DNV  ++   +GI++   V NG  + +G  L+  +   + 
Sbjct: 66  WLTFGKVDVVASAPGRLIPADNVKLVQPAEAGIVRAIHVRNGQFVRKGQVLVELDPTVSA 125

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                 + +++     I   +  L  L+ K         +          +  +T   + 
Sbjct: 126 AETIQAEAALQTALFDIGRARGVLSALDGKGLNFIPPQGTAP--------QLVATQRALA 177

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              ++++  S+  +   +++    R +   +++ L   +    + L   + L  K   ++
Sbjct: 178 AAELATIEASVSGRSADLQAAKAARSEALAQAAKLTETIPLLDQQLDAYEGLLTKGYAAK 237

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             + +  R  + +  +    +   +      +          A     I  DL + +   
Sbjct: 238 LKVIEMRRQRFATIRDREAALATARKAEAQSSSASSTMAQSKAEARSRILTDLAKAEADA 297

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                +LT   +    + +++P+ GTI      +     + ++P+M +VP         K
Sbjct: 298 RLRQEELTKSRQRSSLQRLVAPVDGTITQLSIHTIGGVVEPAKPIMVVVPKGGSLIAEVK 357

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +  K +  VK G    ++   +   R       +E I     + +        Y   +++
Sbjct: 358 ILNKDMGFVKDGQPVAIKLEAFPFTRYGTIPGYVESIGSDAVEDEKLGLV---YPARIRL 414

Query: 394 TDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             +       + L  G            ++   ++ PI
Sbjct: 415 DPIDRGRTTEMRLSAGLATTADIRTGRRSILSYLVSPI 452


>gi|116696247|ref|YP_841823.1| RTX toxin membrane fusion protein [Ralstonia eutropha H16]
 gi|113530746|emb|CAJ97093.1| RTX toxin membrane fusion protein [Ralstonia eutropha H16]
          Length = 445

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 64/435 (14%), Positives = 147/435 (33%), Gaps = 20/435 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            +    PA + R+   SI G+  L + ++ +  +++ VS+ G+++       ++   +GI
Sbjct: 22  GIANRRPARMARIVAGSICGMAVLALVYATMAKMDVVVSAQGKVIPSGKSKVVQPLEAGI 81

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  V +G ++  G  L+  +   T    D  +         +    + LD        
Sbjct: 82  VREIHVRDGEKVKAGDILVELDPTTTAADRDRLQRDQWEAVAGVRRLTALLDG------- 134

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                +   + +         T   +    ++     L      +     +R        
Sbjct: 135 -----KPTMQAVEGLPADIARTQQALLTSALAEQRARLAALDAEIARKRADREGAAASLE 189

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +RA L    K   M + L +   +++  L +    +     EL    +        +N 
Sbjct: 190 QIRASLPLVSKKNDMREELVKTGHIAETGLIETRLELINLRKELALQTNRLAEAGAGLNA 249

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +     A +    + +L +  R  A    +L      R+ +T+ +PI G +      
Sbjct: 250 AQQQRAQAVAEFSARHAAELAEESRKSATAELELVKATMRRDLQTLRAPIDGIVQQLAVT 309

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +      Q+QP+  +VP +    + A+V  K I +VK+G     +   +   R    +  
Sbjct: 310 TVGGVVTQAQPVAIVVPENTALEVDAQVQNKDIGYVKRGQRVITKVETFDFTRFGYIEGE 369

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKI----TDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
           ++ +        N+ +    Y V +K+    T  + +     L  G             +
Sbjct: 370 VQWVGTDAI---NDQKLGPIYPVRIKLDTMATPNSVNGRKGTLTPGMSVTADIRVDQRRM 426

Query: 423 AQEIIHPITDNWPKI 437
               + P+     + 
Sbjct: 427 ISYFLSPLMRYKDEA 441


>gi|330890714|gb|EGH23375.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. mori str. 301020]
          Length = 447

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 58/402 (14%), Positives = 134/402 (33%), Gaps = 6/402 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I++  ++SG+I+       I+S  + ++K   V +G  +  G  LL  +       + 
Sbjct: 50  GKIDVVATASGKIIPSGKTKTIQSSETAVVKAIHVHDGQSVKAGQLLLELDSTSADADVG 109

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  +   R       + LD +N +     K        ++D    +     +      
Sbjct: 110 RVRSDLLAARIDSARAAAMLDAINQR-----KPPRDLTGTIVDADPMHVLAAERWLQGQY 164

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                SL +    ++    +      + + L+  L    K  +  +NL +K  ++++   
Sbjct: 165 QEYRSSLDLVDAEIQQRQADIQAARIQVTSLQKTLPIATKLASDYENLLKKQYIARHAYL 224

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           ++E+       +L               E         A   + +   L+Q  +  A   
Sbjct: 225 EKEQARLDLERQLSVQQASVLQPTAARQEAERRREGVVAQTRRAMLDLLQQADQKIASFN 284

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
             LT      +  T+ +P+ GT+      +       +QPLM  VP  +   + A +  K
Sbjct: 285 QDLTKARYQEDLTTLEAPVDGTVQQLAVHTVGGVVTPAQPLMVRVPDGQPVEVEAMLENK 344

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  V+ G   TV+   +   +    +  +  +     + +         ++ L    L 
Sbjct: 345 DVGFVRAGQPVTVKVETFTFTKYGTIEGEVISVSNDAIEDEKRGLIYSS-KIRLNSDTLN 403

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            +  +I+L  G             + +  + P+  +  + F 
Sbjct: 404 VNGVDIKLSPGMAVTAEVKTNKRRVIEYFLSPLQQHALESFR 445


>gi|170741975|ref|YP_001770630.1| HlyD family type I secretion membrane fusion protein
           [Methylobacterium sp. 4-46]
 gi|168196249|gb|ACA18196.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacterium sp. 4-46]
          Length = 514

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 53/453 (11%), Positives = 132/453 (29%), Gaps = 29/453 (6%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L           T    +     + WS L  ++I   +SG I        ++   +G + 
Sbjct: 63  LDTPPSPQATLFTWTICLMFAAALLWSFLAHLDIHAVASGRIQPSGRSKVVQPFETGKVL 122

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              VENG+++ +G  L+  +  E    +  ++  + +L   I   ++ +  +        
Sbjct: 123 AVHVENGARVKEGDLLIELDPTEAEADLAARRGDLASLEAQIIRRQATVAAVETNQPATS 182

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                             +         I     S    L ++      +       +  
Sbjct: 183 PVAFP-----ASIPPAVQARERAAMLAEIGQYVASRDALLAQIAEKDATQKRFATSIAAR 237

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             L +  ++   M + L  + A ++  +    + V +   +L  +  +          L 
Sbjct: 238 ERLQAVLKERADMRETLVARQAGTRAAVIDAVQQVEQVAADLAYDRGQLIEAQAAAVSLQ 297

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                     + +  + + +  +        +      RE+  + +PI+GT+      + 
Sbjct: 298 RRVEQLATETVAKQHQSVTEAAQKRDALRQDVVKAALKRERTRLTAPISGTVQQLAVTTL 357

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  QPL+ +VP      + A V  K I  V  G  A V+   +   R    +  + 
Sbjct: 358 GQVVTAGQPLLVVVPSEGPIEVEAMVQNKDIGFVIPGQEAVVKIDAFPFTRYGSIEGKVA 417

Query: 369 KIDPIISQQDNNLQTQE----------------------YYEVILKITDLAFSDNN--IE 404
           ++        +     +                       + V ++++      +   + 
Sbjct: 418 RVSRDAVDDRDASGASDAVSMSRGQGLSPVSGTPKTQNLVFPVTIELSRATIEADGKTVP 477

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           L  G          +  +   ++ P+ +     
Sbjct: 478 LTPGMTVTAEIRTGSRRVIDYVLSPVKETTATA 510


>gi|227325951|ref|ZP_03829975.1| protease secretion protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 340

 Score =  230 bits (586), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 44/343 (12%), Positives = 122/343 (35%), Gaps = 10/343 (2%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +D + + +      +  E+  L  +     +   A +     +         +  +    
Sbjct: 3   LDGQYLQLVAREGRLLAEQQRLGDMVMTPRLQPLAEKPEMRVITALQRDLLHSRQQSLKL 62

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
               +  S+      + +        + +   L       ++ L  +++L  +N V +N 
Sbjct: 63  EAEGMRSSIAGMEASLSAQRQVMSSKQKQRETL-------EQQLQGLRSLAAENYVPRNK 115

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + + ER++ +   ++ +   +     R I +           Y KE++ +L   +   +D
Sbjct: 116 MLENERLLAQLNGDIAQLAGDINRTRRDIEQQTLLIAQRQQEYDKEVNSELADVRALLSD 175

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             SK    +       + +P++GT+V  + F+        Q L++IVP  +  ++ A++ 
Sbjct: 176 VGSKKEKADFNLANIQMRAPVSGTVVGLKVFTEGGVIAPGQTLLEIVPDDQPLFVDARLP 235

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            + +  V  G    ++F  +      +    +E +       + +     YY + +++ +
Sbjct: 236 VELVDKVWPGLPVELQFVAFNQSTTPRVAGTVELLSADRLLDERD--GSPYYSLRVQVDE 293

Query: 396 LA-FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
               +   +E++ G P +        +    +  P+ D     
Sbjct: 294 AGKRALEGLEVKPGMPVQGFVRTGERSFVNYLFKPLMDRLHLA 336


>gi|212709782|ref|ZP_03317910.1| hypothetical protein PROVALCAL_00830 [Providencia alcalifaciens DSM
           30120]
 gi|212687593|gb|EEB47121.1| hypothetical protein PROVALCAL_00830 [Providencia alcalifaciens DSM
           30120]
          Length = 448

 Score =  229 bits (585), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 81/433 (18%), Positives = 168/433 (38%), Gaps = 16/433 (3%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           ++ +  P+ L     +SI +GI   I WS    +++  ++ G+++       I++     
Sbjct: 25  SILKTPPSYLAFTMAISISVGIFIAIAWSYFGKLDVQATTQGKLIVSGRTQTIQAFELSR 84

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  VE+G Q+ QG PLL+ + +     +D   VS+   +    +E+     L N+  +
Sbjct: 85  LQQIHVEDGQQVKQGDPLLSVKVLG----VDQDIVSLHYQKNFHASEEMIHHALLNQQQI 140

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                  R  QL            +       ++   +  ++   R  Y  R   E +  
Sbjct: 141 ---ETSPRYPQLSLTEQVQAKLSYQTIKKEYETLLNEIANEVQLNRVNYQAR---ERELK 194

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +  L+ + +K L     L +K  +SQ +  +QER +  +  E      E   +    + 
Sbjct: 195 DINILMHNIKKRLDAHTALNQKQLISQKEFLEQERELLLARKEKTAKQSELSILNSQHHA 254

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L ++ +   A   +E     +Q +  F     +L   ++  + + I +P+ GT+     +
Sbjct: 255 LREKQDRINAQKHQEWYEKYQQAKFKFVSLEQELIKNQERNQLEIIRAPVDGTVQQIAIY 314

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q +Q LM IVP++ +     K+  K I  +++G  A V+   +   R    +  
Sbjct: 315 TLGAVLQPAQQLMVIVPNNHVQLAEVKILNKDIGFIQEGLKADVKIDAFPYTRYGTIEGE 374

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +  I    +Q +N       Y   + ++   L     +IEL  G             L  
Sbjct: 375 LLSISRDSTQDENLGLV---YLAQIGLSSKQLLVEGEHIELTPGLSIVAEIKTDKRRLID 431

Query: 425 EIIHPITDNWPKI 437
            ++ PI +     
Sbjct: 432 YLLSPINEYTSTA 444


>gi|320530948|ref|ZP_08031981.1| type I secretion membrane fusion protein, HlyD family [Selenomonas
           artemidis F0399]
 gi|320136813|gb|EFW28762.1| type I secretion membrane fusion protein, HlyD family [Selenomonas
           artemidis F0399]
          Length = 491

 Score =  229 bits (584), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 59/423 (13%), Positives = 139/423 (32%), Gaps = 16/423 (3%)

Query: 11  RNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
              P    R+ + +I  +   ++ W+I   ++    ++G+I+ +  V  +++   GI++ 
Sbjct: 71  ETPPTYAGRIAVWTIAALMAAILLWAIFGTVDEVAVTTGKIIPDGYVRTLQAYDKGIVRT 130

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V  G ++ +G  L+  +   +   +   +      R  ++  ++  +      D    
Sbjct: 131 IYVTEGQKVSKGDVLMELDPTISEADLAKVRKQAAYARLRLERLQAEKNGGAFHPD---- 186

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                     D   K  S+   +F    +  +  L                 +     LR
Sbjct: 187 ------RNSTDLDEKEISSEQALFASREADYHTRLYAAQQEAAKAEAELRSSKIDLDKLR 240

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           +L +           L ++ A+++  L  Q            E           +++   
Sbjct: 241 SLYAIEADKENRYAALVDEAAIAEISLIDQRGRRIAVEESANEQEETVSGNSAALSKAIW 300

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +     A     I ++++Q Q+       +L    +  E   IL+P  G +   Q  +  
Sbjct: 301 DLANVKAERQLSIDQEIDQTQQELFQANEELKKAAEQHELIKILAPDDGYVSNLQVHTLG 360

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           +    +Q LM++VP      I      K I  +++G  A V+   +   +     A +  
Sbjct: 361 SVVTTAQALMELVPEGTRLEIETWAQNKDIGFLQEGQEADVKIESFDYQKYGVVSAKLTN 420

Query: 370 IDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
           I P   +     +    Y ++L      +      + L +G         +   + +  +
Sbjct: 421 ISPNSIEDPEQGRV---YRLLLTPEKDTIDIEGRKVPLSSGMNVTAEIKTRKKHIYEFFL 477

Query: 428 HPI 430
            P 
Sbjct: 478 EPF 480


>gi|319410986|emb|CBY91383.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis WUE 2594]
 gi|325133624|gb|EGC56282.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M13399]
 gi|325145074|gb|EGC67357.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M01-240013]
 gi|325205552|gb|ADZ01005.1| type I secretion membrane fusion protein, HlyD family [Neisseria
           meningitidis M04-240196]
          Length = 475

 Score =  229 bits (584), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 61/440 (13%), Positives = 147/440 (33%), Gaps = 11/440 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  +        P    R  +   +     + WS    I+I  ++SG+ ++      I+ 
Sbjct: 43  HLELTDTPVSAAPKWAARFIMAFALL---ALLWSWFGKIDIVAAASGKTVSGGRSKTIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  + QG  L   E + T   +   + +++  +      ++ L  L 
Sbjct: 100 LETVVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALE 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++        ++R   L D   +     ++   +   +         + +R         
Sbjct: 160 SRTVPHIDMAQARSLGLSDADVQSAQVLAQ---HQYQAWAAQDAQLQSALRGHQAELQSA 216

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L ++ +  Q+     + L   N +S++   +Q+     +  +L     + + + 
Sbjct: 217 KAQEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +      L   N  ++    L Q          +    ++ ++  TI SP  GT+ 
Sbjct: 277 AAIAQAEQNRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +++     Q +Q +M + P      +   V  K I  V++G  A V+   +   R  
Sbjct: 337 ELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPYTRYG 396

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
                ++ +       +   Q    Y  ++ +    L      + L  G           
Sbjct: 397 YLTGKVKSVSHDAVSHE---QLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIKTGK 453

Query: 420 TTLAQEIIHPITDNWPKIFE 439
             +   ++ P+     + F 
Sbjct: 454 RRVLDYLLSPLQTKLDESFR 473


>gi|70730348|ref|YP_260087.1| RTX toxin transporter [Pseudomonas fluorescens Pf-5]
 gi|68344647|gb|AAY92253.1| RTX toxin transporter VC1447 [Pseudomonas fluorescens Pf-5]
          Length = 462

 Score =  229 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 58/405 (14%), Positives = 144/405 (35%), Gaps = 11/405 (2%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
            W+IL  ++I  S++G ++       I++  +G ++   V +G ++  G  L+    I  
Sbjct: 65  GWAILGFLDIHASAAGRLMVSSYTKVIQAHEAGEVRAIHVRDGQRVKAGEVLVALNPIGI 124

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +   +  +   R  +   ++ L    +     +       +Q+     +  ST  ++
Sbjct: 125 DAELSELRTQLDFKRLELARARALLT--PDPLHSYQTPAGLDAQQVAAAREQLLSTWKEI 182

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            +  + S+   + +     R+         ++ S L  L S+ +K L   + +  +  + 
Sbjct: 183 -SANLDSLNAEIAINQANQRARG-------SEISALGKLASNVRKRLHARRAMAAEQLMP 234

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +L +QE+        L +   E + +        ++ +   A   +E    L ++Q+ 
Sbjct: 235 LVELLEQEKEQLDVERSLAQQQAELQVLKAQAQNRREQRDSFLARTQREQHELLNRSQQE 294

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A    +L      +  +T+L+P+ G +      +     Q +Q L+ IVP         
Sbjct: 295 IAVLEQQLIRGRDRQRLQTLLAPVDGVVQQLAVHTLGGAVQAAQQLLVIVPEGAELDAEV 354

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  K +  V+ G    ++   +   R    +  +  +     + +          + L+
Sbjct: 355 MVLNKDVGFVRAGQPVEIKVDAFPYTRYGTLRGTVAHVSGDAIKDEQLGLVFP-TRIRLE 413

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              +A     + L+ G             +   ++ PI +   + 
Sbjct: 414 RAAIAAGQGWMPLQAGMSVTGEIRTGERRVINYLLSPIREYQSEA 458


>gi|307826039|ref|ZP_07656252.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacter tundripaludum SV96]
 gi|307732878|gb|EFO03742.1| type I secretion membrane fusion protein, HlyD family
           [Methylobacter tundripaludum SV96]
          Length = 445

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 50/399 (12%), Positives = 136/399 (34%), Gaps = 15/399 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WSI   ++I   + G+++ + +V  ++   +GI+K+  V  G ++  G  L   +   + 
Sbjct: 49  WSIFGRLDIIAVAQGKLVPQSSVKIVQPADAGIVKEILVSEGDEVHAGQVLARMDTQFSD 108

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                 +  +      +    + L  ++ + +              D L +  +  +  +
Sbjct: 109 ADGRSLESELHLKSLQLRRADAQLADVSLQPN-------------SDDLPELFAQVNSQY 155

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                +   +L     +               + L+  +  ++      + L +  +VS+
Sbjct: 156 IARQKAYADALGTAHAQRSKAQQELQSALEIETKLKQTVPIYKAHDEAFQRLVKDGSVSK 215

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
              N++ R   +   ELR   +   ++   I +   +     +NY +E+  +  Q +  +
Sbjct: 216 FMANEKSRDHIEKEQELRAQSYTVDSLRSTIRQTEQQIAQITSNYRQELQNERVQAEGEY 275

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                +        E   + +P  G +    + +          +M +VP +        
Sbjct: 276 RKLQQENQKQAHHHELLELKAPQDGIVKDIATHTPGTVVSPGTVVMTVVPKNDPIEAEVW 335

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +T      V+    A V+   Y   +       + ++ P  ++ D   + +  Y  ++++
Sbjct: 336 ITHLDAGFVQSQQHAQVKLAAYPFQKYGMVNGEVSQVSPDATEPDKGQRDEPGYRAVIRL 395

Query: 394 TD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
               L  +     L  G          N ++ + ++ P+
Sbjct: 396 PSAFLENAGKRYRLTPGMQVTAEINLGNRSVLEYLLSPV 434


>gi|222056411|ref|YP_002538773.1| type I secretion membrane fusion protein, HlyD family [Geobacter
           sp. FRC-32]
 gi|221565700|gb|ACM21672.1| type I secretion membrane fusion protein, HlyD family [Geobacter
           sp. FRC-32]
          Length = 472

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 59/448 (13%), Positives = 152/448 (33%), Gaps = 35/448 (7%)

Query: 9   LKRNHPASLKRMTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L+   PA L R  L +  I    ++ W+IL  ++I   + G+++ +  +  ++    GI+
Sbjct: 37  LQEKPPAPLGRTVLKVVAILFCCVLLWAILGRLDIVAVAEGKLVPKTYLKIVQPSEQGIV 96

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
           +   V+ G  + +G  L+  + + +T   +        LR     ID E +         
Sbjct: 97  EDILVKEGQSVTKGQLLMRMDAVLSTAEGNSLTSEFHRLRLGLRRIDAELAGRQLTRESG 156

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D  +                  +  S  ++    +   ++  + + +     +       
Sbjct: 157 DPPD----------------LFAQVSAQYHTNRQAQQSAIDEQQSVLERARQDMASAREI 200

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            + L   L  +++     ++LF+   V++   ++++R   +   +LR      K+    +
Sbjct: 201 KAKLEQTLPHYREQERAYEDLFKTGTVAKLQFSEKQRDRIEKEHDLRTQEFTMKSNQALM 260

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +   +     A   +++  +  ++   F     +L   +   +   + +P  G +    
Sbjct: 261 AQAQKKMAQITAENRRQLQIERVESMGQFEKIRQELAKQQHRHQLLELRAPDDGVVKDLA 320

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           + ++         LM +VP  +       V+ + I  V+      V+   +   +     
Sbjct: 321 THTTGTVVTPGTILMTLVPKEEPLQAEVWVSNEDIGFVRPNQPVKVKLSAFTFQKYGMLN 380

Query: 365 AIIEKIDPIISQQDNNLQTQE-------------YYE--VILKITDLAFSDNNIELRNGF 409
             +E++    S+      T +              Y+  V L    L       +L  G 
Sbjct: 381 GKVEQVSADSSENQGQTGTIDSTTSAPPKDLSRLRYKTLVTLSTQQLMADGQKHKLTPGM 440

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
                      ++ + +  P+T  + + 
Sbjct: 441 QVSAEIKLGTRSVVEYLFSPVTKAFHEA 468


>gi|332710152|ref|ZP_08430105.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
 gi|332351110|gb|EGJ30697.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
          Length = 540

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 77/468 (16%), Positives = 169/468 (36%), Gaps = 53/468 (11%)

Query: 17  LKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
                L +++ +      W+    I+ +V + G++  +  V E+++P  G++ K  ++ G
Sbjct: 65  WSHAILWALLSLTTFGMVWAYFAKIDYAVPARGKLEPQGAVKEVQAPVGGVVTKIHIKEG 124

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++ +G  LL+FE   T   +         L       ++A+   N              
Sbjct: 125 QRVKEGDLLLSFEPKATQAQLTSLNKRRATLIRENQFYQAAISNPNYPPVPPPGMDIQLS 184

Query: 136 EQLLDFLGKYHSTCSKV-----------------------FNYGISSVYRSLKMKLTRMR 172
            QL   +   ++  S++                         YG +++   +    +R+ 
Sbjct: 185 SQLPSLIASRNTLLSEIGLYRAQLSGGSSRANLNPEQRIRLQYGTAALDARIAELESRIG 244

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           S+       + + +  R +L+  +  LT ++ L+E+   S+    +Q+  V     E+  
Sbjct: 245 SLEEQLKQNQIQLANGRDILTVEEGILTDLRPLYEQGGFSKIQFLRQQNEVKNRQTEVNA 304

Query: 233 NIHEQKNMLRHI-------------------------NELYDEANLEFANYLKEISRDLE 267
            I E+K + + I                          E  D  N + A+ + ++++ + 
Sbjct: 305 RIEEEKRLQKEIAGVRANLLSTIASSQRELADLMAQNKERIDSINTQIASIISQLNQRIV 364

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
            N +  A+  S+L   + T   + + +P+ GT+   Q  +    A  +QP++KIVP    
Sbjct: 365 DNNKQMAEIDSQLQQAQLTLSYQELRAPVDGTVFDLQPSTPGFVANTTQPVLKIVP-GSS 423

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY- 386
              +  +T + I  V +G    VR   +        K  +  I       D     Q+Y 
Sbjct: 424 LIAKVYLTNRDIGFVDEGMETEVRVDSFPFSEFGDVKGEVLSIGSDALPPDPAELRQDYT 483

Query: 387 YEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           +   +K+           ++L++G         +  T+         D
Sbjct: 484 FPAKIKLDKQFIQAYGKEVQLQSGMSISANIRVRKRTVMSIFTEMFLD 531


>gi|166850500|gb|ABY91228.1| FitB [Pseudomonas fluorescens]
          Length = 462

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 56/405 (13%), Positives = 137/405 (33%), Gaps = 11/405 (2%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
            W+IL  ++I  S++G ++       I++  +G ++   V +G +I  G  L+    I  
Sbjct: 65  GWAILGFLDIHASAAGRLMVSSYTKVIQAHEAGEVRAIHVRDGQRIKAGEVLVALNPIGI 124

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +   +  +   R  +   ++ L              + ++           +   + 
Sbjct: 125 DAELSELRTQLDFKRLELARARALLTPDPLHSYQTPAGLDVQQA----------AAAREQ 174

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                  +  +L      +     N+    ++ S L  L S+ +K L   + +  +  + 
Sbjct: 175 LLSTWKEISANLDSLNAEIAINQANQRARGSEISALGKLASNVRKRLHARRAMAAEQLMP 234

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +L +QE+        L +   E + +        ++ +   A   +E    L ++Q+ 
Sbjct: 235 LVELLEQEKEQLDVERSLAQQQAELQVLKAQAQNRREQRDSFLARTQREQHELLNRSQQE 294

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A    +L      +  +T+L+P+ G +      +     Q +Q L+ IVP         
Sbjct: 295 IAVLEQQLIRGRDRQRLQTLLAPVDGVVQQLAVHTLGGAVQAAQQLLVIVPEGAELDAEV 354

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  K +  V+ G    ++   +   R    +  +  +     + +          + L+
Sbjct: 355 MVLNKDVGFVRAGQPVEIKVDAFPYTRYGTLRGTVAHVSGDAIKDEQLGLVFP-TRIRLE 413

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              +A     + L+ G             +   ++ PI +   + 
Sbjct: 414 RAAIAAGQGWMPLQAGMSVTGEIRTGERRVINYLLSPIREYQSEA 458


>gi|290474145|ref|YP_003467022.1| RTX toxin ABC transporter protein (MFP) RtxD [Xenorhabdus bovienii
           SS-2004]
 gi|289173455|emb|CBJ80234.1| RTX toxin ABC transporter protein (MFP) RtxD [Xenorhabdus bovienii
           SS-2004]
          Length = 451

 Score =  227 bits (580), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 65/432 (15%), Positives = 162/432 (37%), Gaps = 14/432 (3%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L +  P+   R T +++ IG++ ++ W+ L  +++  +++G ++       I++     
Sbjct: 28  ALSQRPPSPFARYTAITLSIGVLVVLLWAYLGKLDVQATATGRLIASGRSQVIQAYEQSR 87

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    ++NG  I +  PLL    +     +      +   R ++  EK     L  K+D 
Sbjct: 88  LLSIHIQNGQHIEKNAPLLMLNTLGVNQDV----TRLLEQREYLIEEKIRYQALLGKHDP 143

Query: 127 LE-KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                F+ +     + +  ++      F+  I+++Y  + + L+  ++            
Sbjct: 144 ESLPLFQQQTLSQQEKIQTHYEHEKHEFDAIITNLYAEMNVNLSSQKAK-------NGDI 196

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             L  L  +  + L   K L +K  +S+ +  +QE+ + ++   + +   E   ++    
Sbjct: 197 QALTNLRQNINQRLQARKILSQKQVISRVEYLEQEKELLETERVITQQKAELGILMTQYK 256

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L +          +E     +Q +        +L+ +++    + + SP+AGT+     
Sbjct: 257 SLEERLKGINMQKEREWFEKKKQAEMQLGVLKQELSKMQEREALEIVRSPVAGTVQQLSV 316

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     Q +Q LM IVP   +     ++  K +  V+ G   TV+   +   R    + 
Sbjct: 317 HTLGAVLQPAQNLMVIVPDDHVQLAEIQILNKDVGFVRPGQHVTVKVDAFPYTRYGTIEG 376

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            +  I    +            ++ L+  ++      +E+  G             +   
Sbjct: 377 ELLSISRDSTTDGRLGLVFP-AQISLRQNNIIVDGKPVEITAGMSITAEIKTDQRRVIDY 435

Query: 426 IIHPITDNWPKI 437
           ++ PI +   + 
Sbjct: 436 LLSPIQEYQSEA 447


>gi|288959971|ref|YP_003450311.1| secretion protein [Azospirillum sp. B510]
 gi|288912279|dbj|BAI73767.1| secretion protein [Azospirillum sp. B510]
          Length = 512

 Score =  227 bits (579), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 58/421 (13%), Positives = 142/421 (33%), Gaps = 31/421 (7%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            +  I+I+  + G I++ D    +++  +GI++  +V +G ++ QG  LL  +  ++   
Sbjct: 100 WIGHIDITAVTRGRIISSDRNKLVQTLETGIVRAIRVADGQRVEQGAVLLELDPTDSAAD 159

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
               +  +          ++ALD          + F+              +    +   
Sbjct: 160 AGRAEWELAVAETEAARLRAALDG--------RRGFDPAPGA----DAALVTLQRSILAN 207

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +++   +L    ++ R        L  + + L A L   ++ +   +NL ++    + D
Sbjct: 208 QLAARDAALDAIGSQERQRRAEMAALAAEKARLHATLPLIREQVQAKRNLSQRGYSPRFD 267

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L + E+ + +         + +      +  L DE     A +  +   DL   ++  A 
Sbjct: 268 LLELEKELAEVEFGEVAAANREAEAAAALKGLADERRRVTAEFDGKAMADLADAEKRAAA 327

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +LT   + RE++ + +P+ G I      +       ++PLM IVP ++      +V 
Sbjct: 328 LRQELTKAARRRERQLLTAPVGGVIQQLAVHTVGGVVTAAEPLMVIVPANRTLVADVQVD 387

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN--------------- 380
            K I  +  G    ++   +   R       +  +        +                
Sbjct: 388 NKDIGFLHPGMPVEIKIDAFPFTRYGLLPGSVASVSHDAILPPDGAAARIGAPDAAPPPA 447

Query: 381 -LQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
             +    +   + +  +     N   I L  G             +   ++ P+  +  +
Sbjct: 448 AERDGPKFSARIALDRMVIRGENGEDIALAPGMAVTAEVKTGRRRILDYLLSPVLAHVQE 507

Query: 437 I 437
            
Sbjct: 508 A 508


>gi|218661115|ref|ZP_03517045.1| protein secretion protein, HlyD family [Rhizobium etli IE4771]
          Length = 323

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 55/301 (18%), Positives = 115/301 (38%), Gaps = 3/301 (0%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           +          K+F+   S++        +R   +      L  + +     LS  +++L
Sbjct: 23  NAAQDLLDGEQKLFDSRRSALVGMKSQLASRKDQLAEQIKGLVVQINATNDSLSLIEQEL 82

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +  L++K  V+   LN  +R          + I  +        E+  ++     +  
Sbjct: 83  EGVDALYKKGLVTLQRLNALKRARADLQGNSGQEIAAKAEAEGKAIEIDRQSIQLDEDRR 142

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            EI+++L   +   A+   +         +  I +P++G +      + +   +  Q LM
Sbjct: 143 SEIAKELTDVEAKIAENEERRETALDQLRRLDITAPLSGRVHELAVHTINGVIEPGQTLM 202

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +VP +    ++AKV  + I  +  G +  VRF  +        +A+I  I P   + + 
Sbjct: 203 LVVPENDDLTVQAKVATRDIDQLHVGQSVDVRFSAFDQRTTPDVRAVITSIAPDTVKDER 262

Query: 380 NLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                 YY + +K    + +   +I+L  G PAEV     + T+   +  P+TD    +F
Sbjct: 263 T--GISYYPLRVKPEAQSIAKLKSIKLYPGMPAEVFIKIADRTVISYLTKPLTDQMQHVF 320

Query: 439 E 439
            
Sbjct: 321 R 321


>gi|238920045|ref|YP_002933560.1| type I secretion membrane fusion protein, HlyD family [Edwardsiella
           ictaluri 93-146]
 gi|238869613|gb|ACR69324.1| type I secretion membrane fusion protein, HlyD family [Edwardsiella
           ictaluri 93-146]
          Length = 445

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 72/439 (16%), Positives = 162/439 (36%), Gaps = 29/439 (6%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M  L I  ++    WS    I+I  ++ G++  +  V  I+S  +G + +  ++NG ++ 
Sbjct: 1   MYTLCIFTVLAF-AWSFFGRIDIIATAPGKVQPQGYVKVIESEVTGKVSRILLKNGDRVS 59

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHI----DTEKSALDFLNNKYDVLEKAFESRE 135
           +G  +   +  ++    +    +  +    +      ++ A D       + + A E   
Sbjct: 60  EGETVALLDAADSQAKYNDALYNFSSFYAELWRRKTQDRLARDLSVEDRAITDFAVEWPA 119

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + LL    K+  T +   +  ++ +   L+    ++         ++   +  ++L+ + 
Sbjct: 120 QPLLPEEIKHRETSA--MHGELTQLNTDLQNIRAQLAQNTTREQGMKATIASQKSLIETL 177

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            + L + + L EK  VS++D  Q    V ++   L+  + + +++    + L        
Sbjct: 178 NERLQIRRTLVEKQVVSKDDWLQIMTDVKEAKSTLQSTLAQLRDIQAARDILQIALLKTR 237

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            +++ E  +++ Q +R       ++   E      T  SPI GTIV +   S        
Sbjct: 238 HDFISENLKNIGQVERQSNSLREQVNQREAQLALMTFKSPINGTIVASSLVSQGQVVTPG 297

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + LM++VP +    I A V  + I  ++ G    V+   +   R      +++ I     
Sbjct: 298 EELMRVVPDNSRLEIIAYVPNQDIGFIRPGQPVDVKINAFPYTRYGTLNGVVQHISQDAI 357

Query: 376 QQDNNLQTQ----------------------EYYEVILKITDLAFSDNNIELRNGFPAEV 413
              +  Q Q                          V L+   +   +  + L +G    V
Sbjct: 358 PAADAQQVQMDPTRLGSNTKAGGGQSTQGLVFPLTVALEQDHILVGNQQVSLVSGMGVSV 417

Query: 414 LFTAKNTTLAQEIIHPITD 432
                   L   ++ PI D
Sbjct: 418 EIKTDRRRLIDYLVSPIYD 436


>gi|283852044|ref|ZP_06369319.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio sp. FW1012B]
 gi|283572594|gb|EFC20579.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio sp. FW1012B]
          Length = 461

 Score =  227 bits (578), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 63/429 (14%), Positives = 155/429 (36%), Gaps = 16/429 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K+  P S++      +  +I  + WSI+  +++ V++ G +++    V I+   + IIKK
Sbjct: 40  KQPLPTSVRLTYYFLLALVIAALVWSIVAKMDMIVTARGRLISTGKQVVIQPLINSIIKK 99

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
           F VE G  + +G PL++ +           +  + +L   +   ++ L     +      
Sbjct: 100 FHVEVGQVVKKGQPLVSLDPTFAMADEAQVQTRLASLSVQLKRMEAELAGKPFQVT---- 155

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                     D      +  S ++    +  +  L+   +R+          + +   LR
Sbjct: 156 ---------SDMDPSEAALQSNLYRGRQNEYHAKLENYDSRLAQAKGEYESFKKRLESLR 206

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L S  + L M + +F + A S+  +   +     +  E     ++ K   + I +   
Sbjct: 207 EQLQSADEVLKMRQKVFSQGADSRLSVLDAQARFSSTQAEAEGISNDMKVRQQQIAQSQA 266

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E     +N+  +I+ +L   ++     + +     + RE   + SP    ++   ++S  
Sbjct: 267 EREAFISNWRNDIANNLATARKERDTLVEQNAKAIRYRELAELASPFDAVVLELGNYSVG 326

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           + A++ + +M +VP +        +  K I +V+      ++   +   R    +  +  
Sbjct: 327 SVAKEGEAIMTLVPLNFPLEAEVSIETKDIGYVRLKDPVRIKLDAFPFQRHGTMEGDLRV 386

Query: 370 IDPII-SQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEI 426
           +         +       Y+  +++T+    D   +     G             +   +
Sbjct: 387 VSEDAYVVGSSGENKVPTYQARVELTNTTLHDVSKDTRFLPGMTVTAEIVVGERRVISYL 446

Query: 427 IHPITDNWP 435
            +PI     
Sbjct: 447 AYPIIQGLD 455


>gi|218671582|ref|ZP_03521252.1| protein secretion protein, HlyD family [Rhizobium etli GR56]
          Length = 310

 Score =  227 bits (578), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 117/309 (37%), Gaps = 3/309 (0%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            S +    +          K+F+   S++        +R   +      L  + +     
Sbjct: 2   ASNKAASRNAARDLLDGEQKLFDSRKSALVGMKSQLASRKDQLAEQIKGLVVQINATNDS 61

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           LS  +++L  +  L++K  V+   LN  +R          + I  +        E+  ++
Sbjct: 62  LSLIEQELEGVDALYKKGLVTLQRLNALKRARADLQGNSGQEIAAKAEAEGKAIEIDRQS 121

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                +   EI+++L   +   A+   +         +  I +P++G +      + +  
Sbjct: 122 IQLDEDRRSEIAKELTDVEAKIAENEERRETALDQLRRLDITAPLSGRVHELAVHTVNGV 181

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +  Q LM +VP +    ++A V  + I  +  G +  VRF  +        +A+I  I 
Sbjct: 182 IEPGQTLMLVVPENDDLTVQANVATRDIDQLHVGQSVDVRFSAFDQRTTPDVRAVITSIA 241

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           P I + +       YY + +K    + +   +I+L  G PAEV     + T+   +  P+
Sbjct: 242 PDIVKDERT--GISYYPLRVKPEAQSIAKLKSIKLYPGMPAEVFIKIADRTVISYLTKPL 299

Query: 431 TDNWPKIFE 439
           TD    +F 
Sbjct: 300 TDQMQHVFR 308


>gi|268679616|ref|YP_003304047.1| secretion protein HlyD [Sulfurospirillum deleyianum DSM 6946]
 gi|268617647|gb|ACZ12012.1| secretion protein HlyD family protein [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 439

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 68/423 (16%), Positives = 147/423 (34%), Gaps = 19/423 (4%)

Query: 16  SLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            L R  L  I G+I     W     I+I VS+ G+++    +  ++   +G+I K  V+ 
Sbjct: 27  PLGRSILWIIFGVIFFGIMWLSFAKIDIVVSARGKVVPSGEIKVLQPIETGVISKILVKE 86

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +   L+  +   T   +  K+  +         E   L  L          FE  
Sbjct: 87  GEHVEKDQVLMQIDPSVTQTSLASKEKDLIVHTL----ENERLSALVENRKPKWSKFEHL 142

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           ++ LL      HS           S+  S      +           ++    L  LL  
Sbjct: 143 DQALLREQKDLHSHQR-------DSLSASKSQYAMKKSQARAQYNSSKSDVQRLEGLLHK 195

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q  L  M+ + +   +++N+  + ++  +    +L    H++    +H+ E+  E  + 
Sbjct: 196 EQTRLQRMEKVLD--IIARNEYEEVQKNAHNFREQLHMARHKEHESKQHLKEVEQEEKVY 253

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
               +      L + ++      S++  +     Q+ I +P++G I      +       
Sbjct: 254 VEQSISTWFNQLLEKKKELRTLESEVNAIAFQNRQQQIKAPLSGYIGKLMVNTEGGVVTP 313

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           ++ L+ +VP      I+A V  + I  + K  +A ++   +   +    + +++ I    
Sbjct: 314 AEKLISLVPDDAPLIIKATVLNQDIGFITKQMSAAIKIDTFTFQKYGLIEGVVDSIGNDA 373

Query: 375 SQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            + +        YE+ +  T  +         L  G             + +  I+PI  
Sbjct: 374 IEDEKQGLI---YEIKVIPTTDSLMVEGKEKRLEPGMNVTTEIKVGKRRIIEFFIYPIIQ 430

Query: 433 NWP 435
              
Sbjct: 431 YMD 433


>gi|332715679|ref|YP_004443145.1| HlyD family type I secretion membrane fusion protein [Agrobacterium
           sp. H13-3]
 gi|325062364|gb|ADY66054.1| type I secretion membrane fusion protein, HlyD family
           [Agrobacterium sp. H13-3]
          Length = 495

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 77/456 (16%), Positives = 154/456 (33%), Gaps = 29/456 (6%)

Query: 13  HPASLKRMTLLSIIGIIG--LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
            P S  R+  L  I ++   L+ W      +I  ++ G+I     V  I+S   G     
Sbjct: 38  TPQSPVRIAFLWFICVLATSLLVWGWFGKFDIVATAQGKIQPVGRVKIIESLEHGKTSSV 97

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V NG  I  G  +   +D ET      K  S+  L+  I       + L    + L + 
Sbjct: 98  VVGNGDIITAGDVVAELDDTETRADEVAKSGSLNTLQAEILRRTVFREVLAGAKNSLWQQ 157

Query: 131 FESREEQLLDFLGKYHS----TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +     +L F G   +        VF   +  V+ ++     + R        L     
Sbjct: 158 SDGSGYPVLAFPGNISALIRLREQTVFEADLRGVWANIHSLAAQRRQREDQIAGLTEAIE 217

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             R L+ + ++ + M   L +  A SQ ++    +   ++   L + + +       +  
Sbjct: 218 SQRELVQTLEQRVNMRSQLLQSRAGSQVEVFDATQEYQEAKSALADKLAQLMGAKSEVKV 277

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  EA         + +    + QR   +   +L  ++  R++  I SPI G +  +   
Sbjct: 278 VMAEAEKVVETAAADNANRWLEAQRAMDELEQELIKVKSRRQRLQIRSPIDGVVQLSSIT 337

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +  LM+IVP   +  I A +  K I  V+   +A ++   Y   R    K  
Sbjct: 338 AVGQVVAANTELMRIVPLDSVLEIEAYLPNKDIGFVEPQQSAVIKIEAYPYTRFGVLKGE 397

Query: 367 IEKIDPIISQQDNNLQTQE---------------------YYEVILKITDLAFSDNN--I 403
           +++I      + +    +                       + V + + +     N   +
Sbjct: 398 VKRISSDAIPEPDAQNLESTMAQSTQSVIPTGNAQRVQNLVFPVTIALDESVMQINGRLV 457

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            L  G    V        + + +  P+ D   +  +
Sbjct: 458 PLTPGMSVTVEIKTGQRRILEYLFSPLADVASEAMK 493


>gi|281358602|ref|ZP_06245081.1| type I secretion membrane fusion protein, HlyD family [Victivallis
           vadensis ATCC BAA-548]
 gi|281314950|gb|EFA98984.1| type I secretion membrane fusion protein, HlyD family [Victivallis
           vadensis ATCC BAA-548]
          Length = 447

 Score =  226 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 71/429 (16%), Positives = 151/429 (35%), Gaps = 19/429 (4%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P   +     +   + G + W+ +  +++ V ++G+++ +   V IK     +IK   V+
Sbjct: 29  PWPARVGVFSAFFFLAGAVIWACVSQVDVIVGATGKLVTDTPPVVIKPLERTVIKSIDVK 88

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +   L+ F+ +     I   +  +  L    +  +   +F N  Y   + A E 
Sbjct: 89  VGDVVKKDQVLMHFDPVNNLAEIARLESEVSTLTAQFN--RLLAEFKNQPYQPGDTANED 146

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            E QL       +    K ++  I    +S+        S   +   LE ++  L A+  
Sbjct: 147 VEWQLA-----IYKQRRKFYDEKIRYYDQSIAQIKASQHSTEES---LEKQTERLEAVKK 198

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q    +   L +K A+S  +  + +    +   E+ +  +                N 
Sbjct: 199 IEQ----IYTKLLDKKAISLKETLEIQITRMEMESEVDKLRNSLVEQKHQEQTAVASKNS 254

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               +   IS +L + QR             +      + SP    +    +FS  +  +
Sbjct: 255 YIEEWRNSISEELVKVQRELTSNQKSYEKAVQLNSYDRLRSPCDAVVHEIAAFSVGSAVR 314

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           +++ L+ +VP      + A++ PK I  V    +  ++   +   +    +  I  I   
Sbjct: 315 EAEALITLVPLDSKIELEAEIEPKDIAKVHTDSSCRIKLNAFPFQKHGTLEGTIRNISED 374

Query: 374 ISQQDNNLQT--QEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
             Q+        + YY   + I D         N  L  G  A+V        + + +IH
Sbjct: 375 TFQRQQGEAGATRTYYRARIDIDDKVKLRGVPENFRLIPGMEAQVEIRVGRRRVIEYVIH 434

Query: 429 PITDNWPKI 437
           P+  +  + 
Sbjct: 435 PLIKSLDEA 443


>gi|56752200|ref|YP_172901.1| hemolysin secretion protein [Synechococcus elongatus PCC 6301]
 gi|81300713|ref|YP_400921.1| hemolysin secretion protein-like [Synechococcus elongatus PCC 7942]
 gi|56687159|dbj|BAD80381.1| similar to hemolysin secretion protein [Synechococcus elongatus PCC
           6301]
 gi|81169594|gb|ABB57934.1| hemolysin secretion protein-like [Synechococcus elongatus PCC 7942]
          Length = 441

 Score =  226 bits (575), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 75/433 (17%), Positives = 176/433 (40%), Gaps = 27/433 (6%)

Query: 7   KNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +++  N      R+T+ +++G+      W+ +  I+ +V   G++  +  V ++++P  G
Sbjct: 26  QDVSLNQSRLWSRLTIWTLVGVTASATAWACIAQIDEAVQVQGQLEPKAAVKDVQAPVGG 85

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++++ +V+ G ++ QG  L  F      + I     S+  +R  +  E     F     +
Sbjct: 86  VLERLEVKEGQRVTQGQILARFNATTVAERIR----SLTEIRERLVAENQ--TFRAQIGE 139

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             E +    ++Q ++   +   +  +      S + +               +L +E++ 
Sbjct: 140 SSEGSVSVNQQQRIEAARREFESRQEAARLEASQLKQQ--------------QLQVESEL 185

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             +R  L  +Q+ L  ++ L+E+  +++    +QE  V +    LR+N  E + +   ++
Sbjct: 186 QQVRYSLDLNQRILNDLRPLYEEGGIARTQYLKQEETVSQLESTLRKNQAELQRLQFAVS 245

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +              E    +E+N R  A+  S++T  ++T + + + +P +GT+    +
Sbjct: 246 QAEARLTNTQTVTFSEARGRIEENARRIAEIDSQITEAKQTLKYQIVRAPQSGTVFDITA 305

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A  S+PLMK+VP       R  +  K I  V+ G    +R   Y        K 
Sbjct: 306 QGPGYVANTSEPLMKLVP-DDELVARLYIPNKDIGFVRTGQDVDIRIDSYPFSEYGDLKG 364

Query: 366 IIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
            + ++       ++  Q   +  EV L+   L      + +++G         +   +  
Sbjct: 365 KLTRVGSDSLPPNDTYQYVRFPAEVTLQEQKLVSRGRELPIQSGMSVSASIRLRQRPV-- 422

Query: 425 EIIHPITDNWPKI 437
             I  ++D + + 
Sbjct: 423 --ITLLSDLFSRS 433


>gi|330940266|gb|EGH43397.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 314

 Score =  226 bits (575), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 52/298 (17%), Positives = 101/298 (33%), Gaps = 3/298 (1%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            L        ++F+    ++ R        +    L    +    S L A   S +K L+
Sbjct: 15  RLALVLEGQRQLFSSRRQALAREQSGLQASIEGAGLQLAGMRRARSDLMAQADSLRKQLS 74

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            ++ L +   +  N L + +R + +    L +N  E   + + I E       +   Y K
Sbjct: 75  NLEPLAQNGFIPGNRLLEFQRQLSQVQQSLAQNAGETGRIEQGIVESRLRLQQQREEYQK 134

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E+       Q        +L     + +   IL+P  G  V     +     +  + L++
Sbjct: 135 EVRSQWADAQVKALTLEQQLASAGFSLQHSAILAPADGIAVNLGVHTEGAVVRAGETLLE 194

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           IVP      +  ++  + I  V       + F  +   R  +    +  I     Q +  
Sbjct: 195 IVPQGTRLEVEGRLPVQLIDKVASHLPVDILFTAFNQSRTPRVSGEVSLISADQMQDEKT 254

Query: 381 LQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
              Q YY +   + D A    N + ++ G PAE+       +L   +  P+ D     
Sbjct: 255 --GQPYYVLRTSVGDAALEKLNGLVIKPGMPAEMFVRTGERSLLNYLFKPLLDRAGSA 310


>gi|268590162|ref|ZP_06124383.1| RTX toxin transporter [Providencia rettgeri DSM 1131]
 gi|291314441|gb|EFE54894.1| RTX toxin transporter [Providencia rettgeri DSM 1131]
          Length = 442

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 75/433 (17%), Positives = 167/433 (38%), Gaps = 16/433 (3%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            + +  P+ L     +SI +G+   +TWS    ++I  ++ G+++       I++     
Sbjct: 19  AILKTPPSYLALYVAISISVGVFFAVTWSFFGKLDIQATTQGKLIVSGRTQLIQAFELSR 78

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++   V +G  + QG PL+T   +     +D   +S+         E      L ++  +
Sbjct: 79  LEHIHVTDGQVVKQGDPLITVNVLG----VDQDILSLNYQHNFHVAEILIYQALISQQPI 134

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI-YLNRLDLENKS 185
            +         L + L +     ++         + SL  +L     +  +N+   +++ 
Sbjct: 135 EQLP-------LFNQLTELEQNNTRASYQTQKIEFDSLINELNNEIQLNTVNQQARKDEL 187

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             + +L+ + +K L    +L +K  +SQ +  +QER +  +  E    + E   +     
Sbjct: 188 LTINSLIVNIKKRLDAHHSLTKKQLISQKEFLEQERELLIAKKEKVTKLSELSILKSQYQ 247

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L ++ +   A   +E     +Q     A    +L   ++  + + I +P+ GTI    +
Sbjct: 248 ALNEKVDRIKAQKNQEWDEKYKQADFKRASLEQELLKNKERNQLEIIRAPVDGTIQQLAT 307

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     Q +Q LM IVP++ +     K+  K I  + +G  A V+   +   R    + 
Sbjct: 308 HTIGAVLQPAQQLMAIVPNNHVQLAEIKILNKDIGFIHEGLRAEVKIDAFPYTRYGTVEG 367

Query: 366 IIEKIDPIISQQDNNLQTQEYY-EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
            +  +    +  +N      +  ++ LK  +L     +IEL  G             +  
Sbjct: 368 EVISVSRDSTLDEN--LGLVFLGQIGLKQKELLVDGESIELTPGLSIVAEIKTDKRRIID 425

Query: 425 EIIHPITDNWPKI 437
            ++ PI +     
Sbjct: 426 YLLSPINEYTSNA 438


>gi|198284402|ref|YP_002220723.1| type I secretion membrane fusion protein, HlyD family
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218666271|ref|YP_002427069.1| type I secretion membrane fusion protein, HlyD family
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248923|gb|ACH84516.1| type I secretion membrane fusion protein, HlyD family
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218518484|gb|ACK79070.1| type I secretion membrane fusion protein, HlyD family
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 465

 Score =  225 bits (574), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 58/435 (13%), Positives = 146/435 (33%), Gaps = 19/435 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++   PA  +   L +++ ++ +   WS L  I I  +++G+ + +  V  ++   +  
Sbjct: 37  EIQERPPAPWQHWILWTLLALLFVALLWSYLGKINIVATATGQFIPDGRVKVVQPLSTAT 96

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  V +G  + +G  L++     T   +   +  +           + L   +     
Sbjct: 97  VERIYVHDGETVHKGQLLVSLNPAITQANLQATQQELAFRNLQQARIHAQLSGRSAIAPA 156

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                     + +       +     +   + +         T + S       L+N+ +
Sbjct: 157 -----SGTNPEYIRMEKALQAAQEADYQSRLQAAQSRADQNATALNSARALAQSLQNQEA 211

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           LL   + +         +L +  A+ + +     +        + +N  +    L+   E
Sbjct: 212 LLHPQVVADA-------SLAQSGAIPRMEYENARQKELGLQSRIAQNQGDIARYLQRQVE 264

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +     ANY   +   L +N ++     ++ T          + SP+ G +      
Sbjct: 265 YRQDIEGIKANYHATLLHSLGENAQSLISLQAQQTHASHDLSLHELRSPVDGIVQDLAVR 324

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +QP++ IVP      + A +    +  V  G TA V+   Y   +    + +
Sbjct: 325 NVGEVVTAAQPVVSIVPSGTPLVVEAYLPDAHMAFVHVGQTARVKVSAYPFEQYGALQGV 384

Query: 367 IEKIDPIISQQDNNLQTQE----YYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNT 420
           ++KI P       + +        Y V + +       +   +++R G            
Sbjct: 385 VQKISPDAVSPSGSGKALTGEGLSYRVRITVPHPYLMVHGVSVKMRPGMTVSANINTGRR 444

Query: 421 TLAQEIIHPITDNWP 435
            + Q  + P+  +W 
Sbjct: 445 RIIQFFLGPLFRDWD 459


>gi|297537211|ref|YP_003672980.1| HlyD family type I secretion membrane fusion protein [Methylotenera
           sp. 301]
 gi|297256558|gb|ADI28403.1| type I secretion membrane fusion protein, HlyD family
           [Methylotenera sp. 301]
          Length = 453

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 43/446 (9%), Positives = 147/446 (32%), Gaps = 29/446 (6%)

Query: 8   NLKRNHPASLKRMTLL-SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++   P+ L R+ L   +I +  ++ W++   +++   + G+++    +  ++   +GI
Sbjct: 17  GVQERPPSPLPRIVLRGVLILVFLMLLWAMFGRLDVVSVAEGKLVPVSYIKIVQPSEAGI 76

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++   ++ G  + +   L+  +   +       + +++     +   ++ L         
Sbjct: 77  VRDITIKEGQAVTKDQVLIRMDANISEADSKAVQAALQYKSIELRRIEAELSNQPFTRQA 136

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +               +  +     +    +++   L  +   ++  + +         
Sbjct: 137 KDS-------------NELFNRIYAEYQSNRTALQDDLNAESASLQKAHSDLAATVEVQH 183

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +   L S++   T    L +          +++R    +   LR   +  K++   I++
Sbjct: 184 KMEQTLPSYKAQETAYNELVKDGYAGALMGQEKQRDRIDAEQNLRAQEYNAKSLQASISQ 243

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                N   ++Y +++  +       F     +            + +P AG +    + 
Sbjct: 244 SQKRLNQVQSDYRQKLEAERVATFAEFQRLEQEWAKQSHKNSLLELKAPQAGIVKDLATH 303

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +          +M +VP+++       +  +    V  G    V+   Y   +       
Sbjct: 304 TPGTVVSPGTVIMTLVPNNEALQAEVWMKNEDAGFVHAGQEVKVKLSAYPFQKYGMVDGK 363

Query: 367 IEKIDPIISQQ-------------DNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPA 411
           + ++    + +              +    Q  Y  I++++  +     + + L  G   
Sbjct: 364 VLQVSADATDKSASNNNQNNAEQNQSPSNAQLSYRTIIQLSKQSLDTEQDKLHLTPGMQV 423

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKI 437
                  + T+ + ++ PI+  + + 
Sbjct: 424 VAEIKLADETVMEYLLSPISKAFREA 449


>gi|154148902|ref|YP_001406984.1| putative membrane-fusion protein [Campylobacter hominis ATCC
           BAA-381]
 gi|153804911|gb|ABS51918.1| putative membrane-fusion protein [Campylobacter hominis ATCC
           BAA-381]
          Length = 434

 Score =  224 bits (572), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 67/424 (15%), Positives = 153/424 (36%), Gaps = 27/424 (6%)

Query: 16  SLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            L +  L  ++ I   +  W +   I+I VS +G+++   N+  +K   +GII K  V  
Sbjct: 28  PLGKTILWIVVTIFVFLVLWLVFAKIDIVVSGNGKVIPSGNIKILKPLENGIISKILVYE 87

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FES 133
           G ++ +  PL+  +   +   +  ++  +K L   I      L+ L+    + + A   S
Sbjct: 88  GQKVSKNEPLIIIDPSVSKVNLITQEEKLKALNFSIKR----LELLSFSEKLQKDANLSS 143

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            E  L     +         N+ IS +  S+      +           +K S L+ L  
Sbjct: 144 DEMNLYINQKQNFDESIDELNFKISGILNSINGTQAEI-----------SKLSELKILAD 192

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              K+L  ++++     ++  D             +++        +   ++E       
Sbjct: 193 KRVKNLKNVRDI-----IASKDYEDALSKQIDLNSQIKSTNENLLALKSKLSETKKTLEN 247

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              +   +   +L   Q+  A+  + +  L    +Q+ + SP+ G +      +  +   
Sbjct: 248 FKTSQKAKFLDELLTKQKEAAEIKASINALNFQTKQQIVASPVDGYVGKLLIHTVGSSVS 307

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             + L+ I+P ++   I AK+  K I  ++ G    ++   +   +  K    +  I   
Sbjct: 308 SGEELISIIPANEPLIISAKILNKDIGFLQNGQKVAIKVDTFNFQKYGKIDGELIHIGND 367

Query: 374 ISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             + +   +  E +E+ +K   L+        ++  G             + +  I+PI 
Sbjct: 368 AIKDE---KLGEIFEIKVKPKKLSLMVEGKEKQIEPGMSVIAEVKVGKRRVIELFIYPIV 424

Query: 432 DNWP 435
               
Sbjct: 425 KYLD 428


>gi|89901488|ref|YP_523959.1| Type I secretion membrane fusion protein HlyD [Rhodoferax
           ferrireducens T118]
 gi|89346225|gb|ABD70428.1| Type I secretion membrane fusion protein, HlyD [Rhodoferax
           ferrireducens T118]
          Length = 451

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 64/434 (14%), Positives = 153/434 (35%), Gaps = 28/434 (6%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           ++   P+ L R      +G+ GL+  W+    ++I   + G ++  +    ++   +GI+
Sbjct: 23  IQEQPPSRLPRTVGYVTVGLFGLLLVWATFGKLDIIAGAEGRLVPRNYSRVLQPAEAGIV 82

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKY 124
           ++  V +G ++  G  L+  +    +  +   K            ID E      L +  
Sbjct: 83  REVLVRDGEEVKAGQVLMRMDATTASADMGTLKADAALKALGLRRIDAELRGQPLLIDVR 142

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D  E A +   +                +     S   +L  +   +     + +    +
Sbjct: 143 DPPELAVQVLAQ----------------YRARRQSHLDALAQEQATLERAQHDLMAARQQ 186

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            + L+A +  +Q+     + L ++  VS+   N + R   +   EL+       +M   +
Sbjct: 187 LAKLQATVPLYQQSANSYEKLVKEGFVSELGANDKLRERIEKEQELKTQEANMGSMTSAV 246

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +   +     + Y  ++  +  + Q        +L           + +  AGTI    
Sbjct: 247 EQSRKKLAQIKSGYESQLLNERVELQSQQQRTDGELQKQVYKSGLLALKATGAGTIKDMA 306

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           ++S     Q    L+ +VP ++  +    +  + +  V  G +  V+   Y   +     
Sbjct: 307 TYSPGAVVQPGAALLNLVPKNEPLFAEVAIHNEDVGFVAPGQSVKVKLQAYPFQKYGMLD 366

Query: 365 AIIEKIDPIISQQDNN-----LQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFT 416
             +E I    S  D        Q+ + Y+ ++K+       +N   ++L  G   +    
Sbjct: 367 GTVELISADSSANDPQKATAMGQSPQSYKALVKLASQELRASNGEVLKLTPGMVVQAEIH 426

Query: 417 AKNTTLAQEIIHPI 430
               T+ + ++ P+
Sbjct: 427 QGQRTVLEYLLSPV 440


>gi|83745630|ref|ZP_00942688.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum UW551]
 gi|207739514|ref|YP_002257907.1| typeIsecretion system protein [Ralstonia solanacearum IPO1609]
 gi|83727707|gb|EAP74827.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum UW551]
 gi|206592893|emb|CAQ59799.1| typeIsecretion system protein [Ralstonia solanacearum IPO1609]
          Length = 390

 Score =  224 bits (571), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 60/428 (14%), Positives = 126/428 (29%), Gaps = 56/428 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             + +  L    I   + W+    ++      G++        I+S   GI+ +  V  G
Sbjct: 16  RARAILWLICAAIAAFLAWAGFAGLDEVAIGEGKVTPASKGQVIQSLEGGILSELAVREG 75

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  L T + +     ++     I  L+       +    +N+  +V      +RE
Sbjct: 76  DVVEAGQKLATLDPVLARSSMEEALARISALQARAARLHAE---MNDLPEVTFPPELARE 132

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + + D   +      + F   +++                            LR      
Sbjct: 133 KAVTDRKRQLFVANRRAFRENVAN----------------------------LREQQRLA 164

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + +L +   L    A ++ ++ + ++   +   +L     E                   
Sbjct: 165 EDELKIALPLLRTGATNEVEILRLKQKAAEFATKLAATQSE------------------- 205

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y   +  D           +           +  + SP  G +   +  +        
Sbjct: 206 --YYVALKADYASTMADLGPLLKVREGRADLLRRTVLTSPARGIVKDIRVSTIGGVVGAG 263

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM+IVP      I A+++P+ I  +  G  ATV+   +         A +E+I P   
Sbjct: 264 GVLMEIVPLDDQLLIEARLSPRDIAFIHPGQEATVKITAFEPSIYGSLPAKVERISPDTI 323

Query: 376 QQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           +   + +   YY V                  +  G  A         T+   +I P+  
Sbjct: 324 EDQVDRRV-YYYRVYALTQHAYLETKDGKRHPILPGMVATTEIRTGRRTVLAYLIKPLNR 382

Query: 433 NWPKIFER 440
               + ER
Sbjct: 383 AAEALRER 390


>gi|255599190|ref|XP_002537174.1| Alkaline protease secretion protein aprE, putative [Ricinus
           communis]
 gi|223517241|gb|EEF25210.1| Alkaline protease secretion protein aprE, putative [Ricinus
           communis]
          Length = 291

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 99/278 (35%), Gaps = 2/278 (0%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  +L +   + +       +   +   L    +   ++L M K L  +  +S  
Sbjct: 3   NRQQELETALAVLRDQAQQRQQEVSEKRARLKQLEESYNLVSQELKMSKPLAAQGVMSDV 62

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ + ER +     E+ E       + + I E   + +   A +  + S DL   +   A
Sbjct: 63  EILRLERQLSDVKGEMDEARLAIPRLEQAIAEAKSKISASIAKFRSDASNDLNAARAELA 122

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +          +  + +P+ G I   +  +     Q    +M+IVP      I  K+
Sbjct: 123 STSATSIAAVDRLTRTEVRAPVTGFIKQLKVTTVGGVIQPGMEVMEIVPLEDTLLIETKI 182

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
            P  +  ++ G  ATV+   Y         A +E I       +   +++ +Y V ++  
Sbjct: 183 RPSDVGFIRPGQEATVKITAYDFSIFGGLDAEVENITADTITTEKGDKSESFYLVRVRTK 242

Query: 395 DLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              F  S   + +  G  A V       T+ Q ++ PI
Sbjct: 243 STTFSASKKKLPIMPGMMATVHIRTGKKTILQYLLKPI 280


>gi|300697817|ref|YP_003748478.1| hemolysin D [Ralstonia solanacearum CFBP2957]
 gi|299074541|emb|CBJ54092.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum CFBP2957]
          Length = 390

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 60/428 (14%), Positives = 126/428 (29%), Gaps = 56/428 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             + +  L    I   + W+    ++      G++        I+S   GI+ +  V  G
Sbjct: 16  RARAILWLICAAIAAFLAWAGFAGLDEVAIGEGKVTPASKGQVIQSLEGGILSELAVREG 75

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  L T + +     ++     I  L+       +    +N+  +V      +RE
Sbjct: 76  DVVEAGQKLATLDPVLARSSMEEALARISALQARAARLHAE---MNDLPEVTFPPELARE 132

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + + D   +      + F   +++                            LR      
Sbjct: 133 KAVTDRERQLFVANRRAFRENVAN----------------------------LREQQRLA 164

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + +L +   L    A ++ ++ + ++   +   +L     E                   
Sbjct: 165 EDELKIALPLLRTGATNEVEILRLKQKAAEFATKLAATQSE------------------- 205

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y   +  D           +           +  + SP  G +   +  +        
Sbjct: 206 --YYVALKADYASTMADLGPLLKVREGRADLLRRTVLTSPARGIVKDIRVSTIGGVVGAG 263

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM+IVP      I A+++P+ I  +  G  ATV+   +         A +E+I P   
Sbjct: 264 GVLMEIVPLDDQLLIEARLSPRDIAFIHPGQEATVKITAFEPSIYGSLPAKVERISPDTI 323

Query: 376 QQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           +   + +   YY V                  +  G  A         T+   +I P+  
Sbjct: 324 EDQVDRRV-YYYRVYALTQHAYLETKDGKRHPILPGMVATTEIRTGRRTVLAYLIKPLNR 382

Query: 433 NWPKIFER 440
               + ER
Sbjct: 383 AAEALRER 390


>gi|295690446|ref|YP_003594139.1| HlyD family type I secretion membrane fusion protein [Caulobacter
           segnis ATCC 21756]
 gi|295432349|gb|ADG11521.1| type I secretion membrane fusion protein, HlyD family [Caulobacter
           segnis ATCC 21756]
          Length = 463

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 63/424 (14%), Positives = 142/424 (33%), Gaps = 14/424 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R    + +  + L + G++  + W+ +  ++I  S+ G I   DNV  +++   G+++
Sbjct: 41  IERPVSPTARLTSWLLLTGLVLTLLWAAVGQVDIVASAEGAITPTDNVKLVQASGPGVVR 100

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V  G  + +G PL+  +   +         ++   R       +  D L+ +    E
Sbjct: 101 HIHVREGDWVRRGAPLIDLDPTVSGAEEIQAAAALAAARIEAARSLAVADALSGRSASFE 160

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            A         D   +   T  ++    ++         L    +   +    + +    
Sbjct: 161 PA--------ADLPAEVAHTQRRLVEAQLAQSRSGQASLLDARAAALADARSAQAQIDKY 212

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A L    K +  M  L  K       L +  R       E      +++  L    +  
Sbjct: 213 NATLPILDKQIAGMNALAAKGYAPGMRLMELNRQRGAEAGEREVARAQRERALADARKFA 272

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +AN    +  +    DL + Q        +L    +    + +++P+ G+I      + 
Sbjct: 273 AQANEAAQDARQRALSDLARAQSEVVLRGEELRKAREKSRLQRLVAPVDGSIQQLDVHTV 332

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               + ++PLM +VP      ++A+V  K    V+ G    V+   +           I 
Sbjct: 333 GGVVEAAKPLMIVVP-DGALTVQARVLNKDAGFVRAGQPVAVKLQAFPFTVYGTVPGRIV 391

Query: 369 KIDPIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            I        +      Y+   + +    +      ++L  G  A         ++   +
Sbjct: 392 SISRDAVPDKD---VGPYFLARIALERDRIDTPKGPVKLTAGLAATSDIVVGRRSILAYL 448

Query: 427 IHPI 430
           + PI
Sbjct: 449 VGPI 452


>gi|87120538|ref|ZP_01076432.1| hypothetical protein MED121_22312 [Marinomonas sp. MED121]
 gi|86164181|gb|EAQ65452.1| hypothetical protein MED121_22312 [Marinomonas sp. MED121]
          Length = 461

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 64/431 (14%), Positives = 150/431 (34%), Gaps = 15/431 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R  +   + ++ +I WS +  ++I  ++ G ++   +   I+S   G IK
Sbjct: 40  VERPPAPWARRTAIALTLLLLIVIIWSFIGRLDIHATTQGRLIISSHSKIIQSLEPGEIK 99

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V++G  +  G  L++   +     +   K  +   R      ++ L   +N  D  +
Sbjct: 100 AINVQDGQLVTAGETLISLNPVGAAASVQELKQQLDFQRLRQSRLQALLT--DNPLDNFK 157

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                         G   +   +        V  +L     +M +          +   L
Sbjct: 158 MT--------TAIAGSSIALTRQHLISEWQEVQANLANLNAQMDTNIARVSASNRQIESL 209

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           + L  +  + L   + L E+N   + +L +Q R   +S   + E   E + + +   EL 
Sbjct: 210 QKLAININERLDARQALSEQNYYPKLELLEQVRESLESERAINEKRSELEVLKKQYAELE 269

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +     A   +E S +L            +L I ++ +    +L+P+ G +      + 
Sbjct: 270 GQKRSYLAEKQREYSSELNDVLAEIGGLTQQLVIAKEKQRLMKLLAPVDGVVQQLAVHTL 329

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
           +   Q +Q LM IVP +       KV  K +  V++     ++   +   R       + 
Sbjct: 330 AGVVQSAQQLMVIVPANMPLEAEVKVLNKDVGFVRENQPVELKIDAFPFTRYGTISGEVI 389

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            +     + +        +   +K+   +    +  + L+ G          +  +   +
Sbjct: 390 HVSRDAIEDEQLGMV---FTARIKLASNSMVVENETVPLQAGMSLVGEVRTNDRRVIDYL 446

Query: 427 IHPITDNWPKI 437
           + P+     + 
Sbjct: 447 LSPLQQYQSEA 457


>gi|146343015|ref|YP_001208063.1| HlyD family secretion protein [Bradyrhizobium sp. ORS278]
 gi|146195821|emb|CAL79848.1| Putative HlyD family secretion protein [Bradyrhizobium sp. ORS278]
          Length = 469

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 56/453 (12%), Positives = 142/453 (31%), Gaps = 30/453 (6%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                +     +   R    +I+    + + WSI+  ++I  ++ G+I+       I+  
Sbjct: 16  PAALEIVETPASPAGRAVAGTIMLFFAIAVGWSIIGHVDIIAAAQGKIVPTGRTKTIQPL 75

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G++    V++G ++  G  L+  +   T    +  +V+   ++  +D  +     L+ 
Sbjct: 76  EAGVVAAIHVQDGDKVRAGDVLVELDRTVTEA--ERHRVAQGLMQARLDVAR-----LSV 128

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS-LKMKLTRMRSIYLNRLDL 181
             D        R   + +         ++      ++   S L     ++         +
Sbjct: 129 LRDSFADLAALRPLSVPEGAPPTDIARTRAALQAQAAEQLSKLASNQQQIAQKRAEVQSI 188

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E   + + A L   ++   + +N  E    +Q      +  +     E          + 
Sbjct: 189 EAAIAKIDAALPFLRETADIRRNAKEIQYGNQIAFIDAQSRLIDQQSERVVQTRRLVEIE 248

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                L  +     + + +++  DL   ++   +    L   E+   ++ + +PI GT+ 
Sbjct: 249 AARMALEQQLAQTRSGFERQVLSDLTDAEKKADELTQDLVKAERKTSEQLLRAPIDGTVQ 308

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +       +Q LM IVP          ++ + I  V  G  A ++   +   R  
Sbjct: 309 QLALHTVGGVVTPAQQLMLIVPADSQLETEVMISNRDIGFVNVGQPAEIKIDTFNFTRYG 368

Query: 362 KFKAIIEKIDPII-------------------SQQDNNLQTQEYYEVILKITDLAF--SD 400
                +  +                       ++       +  Y   + + +      D
Sbjct: 369 LVHGKVLSVSQDSIVREKPADKQAGGKAAGALAETSEPAGQEFIYSARVSLDEKQMQVED 428

Query: 401 NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
             + L  G    V        + + I+ P+   
Sbjct: 429 KMVALSPGMAVTVEIKTGTRRIIEYIMSPLLRY 461


>gi|291165613|gb|EFE27662.1| type I secretion membrane fusion protein, HlyD family [Filifactor
           alocis ATCC 35896]
          Length = 527

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 76/482 (15%), Positives = 161/482 (33%), Gaps = 58/482 (12%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      KR+       +I ++ WSI+  ++    + G+I+ +  +  ++    G+I 
Sbjct: 43  IERPSSKIGKRIIYGIFYFLIFVLLWSIIGKVDEVAVARGKIVPDGRIKVVQPMSDGVIT 102

Query: 69  KFQVENGSQILQGTPLLTFEDI---------ETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           +  V+ G  + +G  L+  +           +    I   + S+             L  
Sbjct: 103 EICVDEGEHVKKGQVLMEMDTTLQEVDQDEIQKALNIAYIEKSLLQKTLEGQDVTDKLQE 162

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    +V        E + LD+ GK  +   +        +    + +    +       
Sbjct: 163 VQISEEVKNTLLHLSESRELDYKGKQEALQLQKEQAQERLLSAEAEYRRQVRQKPINQIR 222

Query: 180 DLENKSSL------------LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           + E K               L   +S  +K+ TM K L+E  A+++ D    +  V  + 
Sbjct: 223 EKELKEVTEIPKTETLELKKLENKISILEKEETMQKQLYEAGAIAKQDWENAKNAVSIAK 282

Query: 228 LE----------------------------LRENIHEQKNMLRHINELYDEANLEFANYL 259
            E                            L ++I  QK  ++   +    A  E  N  
Sbjct: 283 KEYATQTAKAHMQQTNSVLEWQNAKSSTLNLEDSIELQKIKIQQAEKEIALAEKEMDNLK 342

Query: 260 KEISRDL----EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           +     L     +  +   +  SKL    K    +T+ SP  G +    S +      ++
Sbjct: 343 QNYRTSLLNYIVEKDKEIQELTSKLEKANKILAFQTLESPTNGIVQGIASNTVGGVITKA 402

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q +M IVP +    I A +  K I  V++G    V+   ++  +      II K+ P   
Sbjct: 403 QTVMTIVPENTPLVIEAYLNNKDIGFVRQGQEVRVKLDAFSYQKYGTIDGIITKVSPDAY 462

Query: 376 QQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           + +        Y++ +++   A       ++L  G             + +  + P+  +
Sbjct: 463 EDEKMGLV---YKISIQMKKTALKVEGEEVKLSPGMAVVAEIKTGKRRIIEFFMEPVLRS 519

Query: 434 WP 435
             
Sbjct: 520 LD 521


>gi|227356381|ref|ZP_03840769.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Proteus mirabilis ATCC 29906]
 gi|227163491|gb|EEI48412.1| MFP family membrane fusion leukotoxin secretion protein LktD
           [Proteus mirabilis ATCC 29906]
          Length = 454

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 68/427 (15%), Positives = 155/427 (36%), Gaps = 18/427 (4%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            +    P    R+  + I + +I  + W+ +  +++  S+ G+++      +I+      
Sbjct: 31  AVLEKPPTPYSRIIAIIISLSVIIFLLWAYIGKLDVLSSAIGKLVVSGYSQQIQIYEHSR 90

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+NG Q+ +G  LLT + +   + I+  K  I+NL             L  +Y  
Sbjct: 91  LSAIHVKNGQQVTKGEALLTLDILGVDEEINNLKNKIENLLL-----------LKIRYQA 139

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           L +          + L K       + +         S+    + + +   N+L    + 
Sbjct: 140 LSQNTRPDTIDDFNLLNKEKKEAVLLSYQKEKDEFDASINHINSEIETNNKNKLLTHQEI 199

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           + L  L ++ +K   + K L++K  +S  +  + ++ + +    ++    E   +     
Sbjct: 200 NSLNELKNNIEKRFNIKKKLYDKKIISTMEFLENKKELLEINQIIKRKSSELIILSSQEQ 259

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +     +        E     +Q +         L   +K ++ K + SP+ GT+     
Sbjct: 260 QYIKNRDRLEKQKHLEWHDKFKQYESEVFIYQQNLFHAQKRQQLKVVRSPVTGTVQQLAV 319

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     Q SQ +M IVP+++       +  K I  +  G  A ++   +   R    + 
Sbjct: 320 HTLGAVLQPSQAVMVIVPNTQHNVAEVNILNKDIGFIYPGQKAVIKIDAFPYTRYGTIEG 379

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLA 423
            I  I     Q +   Q    Y V++++      ++    +L  G         +   + 
Sbjct: 380 TIVNIAKDSIQHE---QLGLVYPVLIELDKQVMGEDEAQYKLATGMSLVADIKIEKRRVI 436

Query: 424 QEIIHPI 430
             ++ PI
Sbjct: 437 DYLLSPI 443


>gi|74207916|dbj|BAE29084.1| unnamed protein product [Mus musculus]
          Length = 491

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 69/454 (15%), Positives = 159/454 (35%), Gaps = 43/454 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K +K   P   + +     + +   I W+    ++    + GE++    V  ++S   G 
Sbjct: 41  KAVKELPPLYTRLLAGSVSLLVFVAIAWAHFSKVDEVAVAPGELIPSVQVRPVRSLAGGT 100

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNK 123
           I+  +V+ G ++ QG  L+  +       ID    S K +R     ++TE+     +   
Sbjct: 101 IRSVKVKEGDRVKQGDSLIELDAALPQTEIDRLDKSAKLIRLDIARLETERKERLTVGGL 160

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D                  +  +   + F+   ++    +  +   + +  +    L+ 
Sbjct: 161 KD------------------QLLAARLREFDSLQAAATAEVNRQSAAVSAAKIRSARLQE 202

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST---LELRENIHEQKNM 240
             S  +  L++ +K    ++ L +  A+++ +    +  V         L ++I  Q+  
Sbjct: 203 NLSNAKKNLANARKKEQGLRTLIKDGAITRLNYIDAQDNVISLEDKVNSLEKDIAAQEQE 262

Query: 241 LRHINELYDEANLEFANY------------------LKEISRDLEQNQRTFADEMSKLTI 282
           +R I + Y  A    A                       I   + Q          +L  
Sbjct: 263 VRQIKQAYLSAQKSAARMGSARQSETLTQLDDRSKDRGGILTQINQRSEELTTIEGQLKQ 322

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
             + RE++TI +P+ GTI   +  ++    Q  + L+ ++P  +   +  KV  + I  +
Sbjct: 323 ARQERERETIKAPVTGTIYNVKITTAEGTVQPDKELLSVLPEDQELLLEVKVLNRDIGFI 382

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             G  A V+   +        +  + ++ P    + +         + L    +      
Sbjct: 383 SPGMKAKVKMASFPFQEFGTLEGTVVQVSPNAITEKDLGLVFP-TRIRLNKGSVRVRSQE 441

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
           ++L  G  A      +  ++   +I PIT  + +
Sbjct: 442 VKLVPGMAASGEIVTRKKSILTFLIEPITHRFRR 475


>gi|163867906|ref|YP_001609110.1| putative transporter [Bartonella tribocorum CIP 105476]
 gi|161017557|emb|CAK01115.1| putative transporter [Bartonella tribocorum CIP 105476]
          Length = 441

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 62/425 (14%), Positives = 149/425 (35%), Gaps = 6/425 (1%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R    +L  +  + +   + ++  S +   EI     G ++    V  +++  +G IKK 
Sbjct: 9   RPLSPTLHMVVAVFVALFLFIVIGSFISKTEIVARGQGAVIPTSYVQLVQAQNTGRIKKI 68

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V+ G  + QG  L+  +  E  +     +  I   +       +A+    ++ D L+  
Sbjct: 69  LVKEGQFVHQGDLLIQLDPREALNERARVQADIAQ-QTLQAQIAAAILAALSERDPLDTD 127

Query: 131 FESREEQLLDFLGKYHSTCS----KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           F ++    L       +T      K+ +  + S+   +K    +   +  +      +  
Sbjct: 128 FVTKGLSYLQIPASSSNTARLKGEKLIHATLQSLQDKVKTLKAQADRVTRSGAVQYAQLD 187

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L+      Q+ L   K+L E   +S +   ++         E+  N    +     I  
Sbjct: 188 KLQDDQQLSQEKLKAAKSLMETKVISNSLYLERLHDFKNVEHEILANKRRLEENTAEIEA 247

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L+ +     ++ +    +   + + +     +KL   +   +  ++ +P+ G I      
Sbjct: 248 LHQQRQSLISDEIARYQQLSRETELSLQGLKAKLDSSQYRLDHLSLYAPVDGRIDDLSIH 307

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +   + +  + LM+IVP +    + A    + I  ++KG  A V+F  +   R       
Sbjct: 308 TLGGFVEAGKTLMRIVPDTGGLIVEAFFDNRDIGFLEKGQRAYVKFSAFPPERYGVVYGT 367

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +  +    ++ +  +       + +    + F+   ++   G             L    
Sbjct: 368 VMNVGA-TARHEQEINGAYAVLIKIDQDHITFNHQELKFIPGMTVTADVITSKRRLISYF 426

Query: 427 IHPIT 431
             PIT
Sbjct: 427 FEPIT 431


>gi|302878654|ref|YP_003847218.1| type I secretion membrane fusion protein, HlyD family [Gallionella
           capsiferriformans ES-2]
 gi|302581443|gb|ADL55454.1| type I secretion membrane fusion protein, HlyD family [Gallionella
           capsiferriformans ES-2]
          Length = 474

 Score =  223 bits (568), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 47/419 (11%), Positives = 127/419 (30%), Gaps = 28/419 (6%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    +++  S+ G++L +  +  ++    G+I++  V  G  +  G  L+  +   T 
Sbjct: 65  WAAFGKLDVVASAEGKLLPQSYLKIVQPSEQGVIREILVNEGQHVQAGQTLMRMDTTLTD 124

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                 K      +  +    + L                  E+L     +  +     +
Sbjct: 125 ADGSEIKSDYLGKKITLRRIDAELTNQLF-------------ERLPSEALELFNPVLNQY 171

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                ++  +L  +              +  SS L  +L  ++      ++L +   VSQ
Sbjct: 172 IANRKALETALAEEHALHDKAQSELASAQTVSSKLMQVLPHYRAQDDAYRDLVKDGYVSQ 231

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
                + R   +   +L+   H        + +  +      A+Y +++  +       F
Sbjct: 232 LSATDKARERIEKEQDLQSQQHIITAARATLQQSRERIGKITADYRRQLQAERADISDKF 291

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                +L   +  R    + +P  G +    + ++         LM +VP+ ++      
Sbjct: 292 EKLEQELAKQQYRRGLHELKAPQDGVVKDLATHTAGTVISPGTILMTLVPNEEILRAEVW 351

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--------- 384
           V  + +  +  G    ++   Y   +       +  +    S        Q         
Sbjct: 352 VANQDVGFIHTGENVKLKLASYQFQKYGMIDGKVVNLSADASDTPQQSAGQTGTPNNKPG 411

Query: 385 ----EYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
                 Y  ++ +       + +   L  G            ++ + ++ P+   + + 
Sbjct: 412 NGQPSSYRALIDLKTQELVVDGVRHSLTPGMQVTAEIHLGRRSIFEYLLSPVLGAFQEA 470


>gi|92118524|ref|YP_578253.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
 gi|91801418|gb|ABE63793.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
          Length = 477

 Score =  222 bits (566), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 59/428 (13%), Positives = 155/428 (36%), Gaps = 21/428 (4%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R  P   +      +  I+ ++ W+ L  +E  V++ G+++     V ++   + +I++
Sbjct: 53  ERAPPRVARITLYSVVALILAMVAWASLSSVETIVTARGKLIAISPNVAVQPLETSVIRE 112

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            +V+ G  + +G PL T +   +    D  +  +  L   I   +S L   +        
Sbjct: 113 IKVKVGDIVSKGQPLATLDPTFSQADTDQLRTRVTALDAAIKRLQSELSGGDYVAADSSN 172

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           + E  +E+L      ++ T  + ++  I+S   +LK                E++  L+R
Sbjct: 173 SDELLQEKLFRQRRAFYETSLRNYDAQIASAQANLKAG--------------EDEEGLVR 218

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L + Q   TM  +L EK   S+ +L   +    +    L   +  + +    + +   
Sbjct: 219 QRLETLQSIETMRSSLMEKKVGSRLNLLLSKDARLEVENNLARVVGSEADYKHRVEKARA 278

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +  +   ++ +   ++L   +        +L   E+ R+   + +P+   ++   + +  
Sbjct: 279 DRQVFADDFRRTAYQELVDTRAKQNSAAEELKKAERRRQLTVMAAPVDAVVLEIANRTVG 338

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           +  ++++ L  +VP          V  + I  +  G    ++F  +   +       +  
Sbjct: 339 SVVREAETLFVLVPRDTPLQAEVNVEGRDIGQISIGQPVRIKFDAFPFQKYGTGSGKVSV 398

Query: 370 IDPIISQQDNNLQTQE-----YYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTL 422
           +       +            YY V++ +            ++  G          +  +
Sbjct: 399 VSKDSFGAEAKSDGSHRAIPAYYRVLVDLDRARLRGQPAQFQMIPGMELTAEMKVGDRRV 458

Query: 423 AQEIIHPI 430
               ++P+
Sbjct: 459 ISYFLYPL 466


>gi|21305106|gb|AAM45568.1| AqxD [Actinobacillus equuli subsp. haemolyticus]
          Length = 478

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 73/429 (17%), Positives = 160/429 (37%), Gaps = 25/429 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   +  SI+  +EI  S+SG++       EIK   + ++K+  V++G  
Sbjct: 58  RLVAYLIMLFLFLALVISIVSHVEIVASASGKLTFSGRSKEIKPIENALVKEIFVQDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  LL    +         + S+   +               +Y+ L  A E+    
Sbjct: 118 VQKGELLLHLTALGADADQQKTQSSLSLAKLE-----------RYRYETLLTAVETNHLP 166

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKSSL-----LR 189
           L++      S  S+     I  +         K    + + L R + E ++ L       
Sbjct: 167 LIELTHNDFSYASEEDKTRIRHLIVEQFEAWQKQKYQKELVLQRREAEKQTVLANIRKYE 226

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            +    Q+ L  +K LF   + S++D+  QE    ++  EL         +   + +  +
Sbjct: 227 GISRVEQEKLKDLKKLFNSRSASKHDVLAQENHYIEAVNELAVYQSRLNEVESDLRQAKE 286

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +A L    +  ++   L+QN  T      +L   E+ +    I +P++GT+   ++ +  
Sbjct: 287 DAQLITQLFKADVLEKLKQNVETEKQLKLELEKNEQRQVASVIRAPVSGTVQQLKTHTVG 346

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                ++ LM I P   +  + A +  K I  ++ G  A ++   +   R       ++ 
Sbjct: 347 GVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPYTRYGYLTGKVKH 406

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEI 426
           I     +   + Q    +  I+ I     S      I L +G            ++   +
Sbjct: 407 I---TLEAIEHPQLGLVFNTIISIDKKTLSSKDGKEIALGSGMSVTAEIKTGERSVISYL 463

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 464 LSPLEESIS 472


>gi|26991604|ref|NP_747029.1| HlyD family secretion protein [Pseudomonas putida KT2440]
 gi|24986695|gb|AAN70493.1|AE016691_1 HlyD family secretion protein [Pseudomonas putida KT2440]
          Length = 472

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 78/434 (17%), Positives = 161/434 (37%), Gaps = 19/434 (4%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
               +L+      L R    S++  IGL + W+ +  I++  S+ G+I+       I++ 
Sbjct: 40  PAALSLQETPVHPLPRYLQWSLLMFIGLALAWACIGEIDVIASAEGKIVPSGRSKLIQAS 99

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
              +++   V +G  + +G  L+  E   T    D+K++  + L   ID  +++      
Sbjct: 100 EVAVVQSIHVVDGQPVRKGDVLVELEGQLTEA--DIKRLGSELLAAQIDQARASTLLSAL 157

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             DV   +       +        +   +        +  +L+     +          +
Sbjct: 158 DGDVAPASLAPL---IPQATAAQQAGAQRWLEGQYLELQATLEQADAEIGQRAAEIRSAQ 214

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            ++  LR LL   ++     K LF ++AV+++   ++E    ++ LE    +  Q++ + 
Sbjct: 215 GRADALRQLLVITRQLTADYKLLFSESAVAKHTYLEKE----QARLEQERELALQRSRID 270

Query: 243 HINELYDEANLEFANYLKEISRDL----EQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +N     A    +  + ++ R +     + QR  A    +L   E+    K + SP+ G
Sbjct: 271 ELNAARLAAQHRRSGAIAQLRRAMLDLHGEAQRRIATLEQELNKAEQRHRLKVLTSPVDG 330

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T+      +       +Q LM IVP  +   +  KV  K I  V  G    V+   +   
Sbjct: 331 TVQQLAIHTQGGVVTPAQTLMVIVPTGEPVEVEVKVENKDIGFVFPGQHVEVKIETFTFT 390

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFT 416
           R      ++E I     + D +      Y   +K+   A    DN++ L  G        
Sbjct: 391 RYGVVPGVVESISDDAIEDDRHGLL---YSARIKLAKEALRVGDNDLPLTAGMAVRAEVI 447

Query: 417 AKNTTLAQEIIHPI 430
                +    + P+
Sbjct: 448 VDRRRVISFFLSPL 461


>gi|325121592|gb|ADY81115.1| putative protein secretion efflux system, membrane fusion
           protein(superfamily ABC, membrane) [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 345

 Score =  221 bits (564), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 57/371 (15%), Positives = 124/371 (33%), Gaps = 53/371 (14%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               +  +  IG++    W+ +  +E   + +G+++       I+S   GI+ K  V+ G
Sbjct: 25  RASLVIWIVGIGLVIFFIWAWVFKLEEVSTGTGKVIPSSKEQVIQSLEGGILTKLNVQEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L   +       +   K  + + +      ++ +    N   ++      +E
Sbjct: 85  DIVQKGEILAQLDPTRFASNVGESKSLLISAQATAARLRAEV----NGTPLVFPEIVMKE 140

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L+      + +                             R DLE   + LR  L   
Sbjct: 141 PKLVQEETALYRSR----------------------------RADLEQTLAGLRQALQLV 172

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q++L M + L  K A S+ ++ +  R                       N+L ++ N   
Sbjct: 173 QQELAMTEPLVAKGAASEVEVLRLRREA---------------------NDLQNKMNDAQ 211

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y  +   +L +       +   +     + ++    +P+ G +      +      Q+
Sbjct: 212 NQYYVKAREELSKANTDSETQQQIVLGRSDSLDRAVFRAPVRGVVKEIAVTTRGGVVPQN 271

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM IVP  +   I A++ P+ I  ++ G  A V+   Y        K  +  I P   
Sbjct: 272 GKLMTIVPIDEQLLIEARILPRDIAFIRPGQEALVKITAYDYSIYGGLKGKVTVISPDTI 331

Query: 376 QQDNNLQTQEY 386
           + +       +
Sbjct: 332 RDEVKQDPTPF 342


>gi|296162580|ref|ZP_06845369.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           sp. Ch1-1]
 gi|295887204|gb|EFG67033.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           sp. Ch1-1]
          Length = 475

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 69/429 (16%), Positives = 153/429 (35%), Gaps = 16/429 (3%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           HPA    M +L I+ ++ L+   I+  ++I V++ G+++  + V  I+   +G++++  V
Sbjct: 55  HPAPRWAMRILVILAMLILLI-GIVGRLDIVVTAKGKLVPNERVKIIQPAITGVVRQILV 113

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            +G ++     LL  +  +     D  + S             A         + E    
Sbjct: 114 RDGQRVNAQQALLVLDATQAAADADKARSS----------RIDAALASARATALFEAVKT 163

Query: 133 SREEQL--LDFLGKYHSTCSKVFNYGISSVYRS-LKMKLTRMRSIYLNRLDLENKSSLLR 189
            R   L  +D       + ++ F  G+   Y   L      +            + + LR
Sbjct: 164 GRVPALRTVDGASSEQQSQAQHFAEGLYREYADKLMASQAELLKREAELATTRQEVAKLR 223

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A     +++    + L     V+Q+D   +E+   +   EL       + +   I +   
Sbjct: 224 ATAPLARREANDYRYLARDQYVAQHDYLGKEQSALEQEHELAAQQSRARELAAAIVQQRA 283

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                 + + +E    L++ ++ FA   +  T     +   T+ +P++GT+    + +  
Sbjct: 284 AIGQTTSQFAREQLDVLDKARQQFAQYRADETKAVTRQSLMTLYAPVSGTVEQLAAHTPG 343

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                +Q +M+IVP      + A +  K +  V  G  A V+   +   R       +  
Sbjct: 344 GVVTTAQSIMEIVP-DDAVEVEASIENKDVGFVNVGQDAIVKIEAFPYTRYGYLTGKVTS 402

Query: 370 IDPIISQQDNNLQTQEY-YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           +    +Q  +      +   + L    +  +D  + L  G            ++A   + 
Sbjct: 403 VSNDAAQNRDRKLGLTFTAHIRLPTNQIQVNDKPVRLTPGMEITAEIRTGQRSVAAYFLD 462

Query: 429 PITDNWPKI 437
           P+     K 
Sbjct: 463 PLMQTAGKS 471


>gi|307250585|ref|ZP_07532527.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306857401|gb|EFM89515.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 477

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 66/420 (15%), Positives = 162/420 (38%), Gaps = 8/420 (1%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   I  SI+  +EI  S++G+++   +  EIK   + ++K   V++G  
Sbjct: 58  RLIAYLIMLFLFLAIVISIISKVEIVASATGKLVFSGHSKEIKPIENALVKDIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  LL    +         KVS+   R      KS L  + +    L    +  +  
Sbjct: 118 VEKGQLLLNLTALGADADKQKTKVSLGLERLDGYRYKSLLYSIEHNRLPL---LDFNQAD 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                 +  +    +      +  +    K    +     +  +        +     ++
Sbjct: 175 FDSVQEEDKTNARHLITEQFETWQKQKYQKELAYQRKQAEKQTVLANIRKYESASRIEKE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L+ +K L++  ++S+++L  QE    +++ EL       K +   + +  ++  L    
Sbjct: 235 KLSDLKKLYDVKSISKHELLAQENRYVEASNELSVYQSHLKEVESDLLKAQEDLKLVTQL 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  +I   L+QN +       +L   E+ +    I +P++GT+   ++ +       ++ 
Sbjct: 295 FKSDILEKLQQNIQREKQLTLELEKNEQRQLASIIRAPVSGTVQQLKTHTKGGVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM I P   +  + A +  K I  V+ G  A ++   +   R       ++ I     + 
Sbjct: 355 LMVIAPEDDVLEVSALIQNKDIGFVEIGQEAVIKVETFPYTRYGYLYGKVKTITLDAIE- 413

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELR--NGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             + Q    +  I++I     +D + E++  +G            ++   ++ P+ ++  
Sbjct: 414 --HPQLGLVFNSIIEINKKTLTDGDKEIQLGSGMSVIAEIKTGERSVISFLLSPLEESIT 471


>gi|165976751|ref|YP_001652344.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|303250588|ref|ZP_07336785.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303253082|ref|ZP_07339232.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307248359|ref|ZP_07530382.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307252966|ref|ZP_07534854.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|165876852|gb|ABY69900.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|302648067|gb|EFL78273.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302650576|gb|EFL80735.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306855097|gb|EFM87277.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306859604|gb|EFM91629.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 477

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 66/420 (15%), Positives = 162/420 (38%), Gaps = 8/420 (1%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   I  SI+  +EI  S++G+++   +  EIK   + ++K   V++G  
Sbjct: 58  RLIAYLIMLFLFLAIVISIISKVEIVASATGKLVFSGHSKEIKPIENALVKDIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  LL    +         KVS+   R      KS L  + +    L    +  +  
Sbjct: 118 VEKGQLLLNLTALGADADKQKTKVSLGLERLDGYRYKSLLYSIEHNRLPL---LDFNQAD 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                 +  +    +      +  +    K    +     +  +        +     ++
Sbjct: 175 FDSVQEEDKTNARHLITEQFETWQKQKYQKELAYQRKQAEKQTVLANIRKYESASRIEKE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L+ +K L++  ++S+++L  QE    +++ EL       K +   + +  ++  L    
Sbjct: 235 KLSDLKKLYDVKSISKHELLAQENRYVEASNELSVYQSHLKEVESDLLKAQEDLKLVTQL 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  +I   L+QN +       +L   E+ +    I +P++GT+   ++ +       ++ 
Sbjct: 295 FKSDILEKLQQNIQREKQLTLELEKNEQRQLASIIRAPVSGTVQQLKTHTKGGVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM I P   +  + A +  K I  V+ G  A ++   +   R       ++ I     + 
Sbjct: 355 LMVIAPEDDVLEVSALIQNKDIGFVEIGQEAVIKVETFPYTRYGYLYGKVKTITLDAIE- 413

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELR--NGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             + Q    +  I++I     +D + E++  +G            ++   ++ P+ ++  
Sbjct: 414 --HPQLGLVFNSIIEINKKTLTDGDKEIQLGSGMSVIAEIKTGERSVISFLLSPLEESIT 471


>gi|126361|sp|P18790|HLYD_ACTAC RecName: Full=Leukotoxin secretion protein D
 gi|38649|emb|CAA37907.1| unnamed protein product [Aggregatibacter actinomycetemcomitans]
          Length = 477

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 64/428 (14%), Positives = 150/428 (35%), Gaps = 11/428 (2%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P  +    +L +   I +   SI   +EI  ++SG+        EIK   + ++K   
Sbjct: 55  NAPRFVSYSIMLFLTLAIIV---SIFSNVEIIATASGKFALSGRSKEIKPIENSLVKHIF 111

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +G  LL    +         K S+   +      KS L+ +      +    
Sbjct: 112 VKEGEYVKKGELLLKLTALGAEADTLKTKTSLSQAKLEEFRYKSLLEAVEKDQLPI---L 168

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +  +  L           + +     S+  +    K   +      +L    +      L
Sbjct: 169 DFSKIDLPFMTENDQKRVTLLIEEQFSTWQKQRHQKTLNLNKKEAEKLSYLARIKKYEGL 228

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +++ Q  L   + L++++A++++ +  +E     +  EL         +   +    +E 
Sbjct: 229 INTEQVRLDDFRALYKEHAIAKHTVLDEENKYQDAINELEVYKASLMQVENEVLLAKEEQ 288

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            L    +  +I   L+Q          +L    + ++   I +P++GT+   +  +    
Sbjct: 289 ELVTQLFKNDILDKLKQATDNVNLLTFELDKNNQRQQVSEIRAPVSGTVQQLKVHTIDGV 348

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              ++ LM +VP      + A +  K I  VK+G    ++   +   R       ++ I 
Sbjct: 349 VTTAETLMVVVPEEDSLEVTALIQNKDIGFVKEGQEVVIKVEAFPYTRYGYLTGKVKNIT 408

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
               +   + +    +  I+++        +  I L  G            ++   ++ P
Sbjct: 409 LDAIE---HPKLGLVFNTIIELDKKTLSTEEKEIPLSAGMEITAEIKTGMRSVISYLLSP 465

Query: 430 ITDNWPKI 437
           + ++  K 
Sbjct: 466 LEESIDKS 473


>gi|558154|emb|CAA56360.1| xIIID [Actinobacillus pleuropneumoniae serovar 8 str. 405]
          Length = 477

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 66/420 (15%), Positives = 162/420 (38%), Gaps = 8/420 (1%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   I  SI+  +EI  S++G+++   +  EIK   + ++K   V++G  
Sbjct: 58  RLIAYLIMLFLFLAIVISIISKVEIVASATGKLVFSGHSKEIKPIENALVKDIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  LL    +         KVS+   R      KS L  + +    L    +  +  
Sbjct: 118 VEKGQLLLNLTALGADADKQKTKVSLGLERLDGYRYKSLLYSIEHNRLPL---LDFNQAD 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                 +  +    +      +  +    K    +     +  +        +     ++
Sbjct: 175 FDSVQEEDKTNTRHLITEQFETWQKQKYQKELAYQRKQAEKQTVLANIRKYESASRIEKE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L+ +K L++  ++S+++L  QE    +++ EL       K +   + +  ++  L    
Sbjct: 235 KLSDLKKLYDVKSISKHELLAQENRYVEASNELSVYQSHLKEVESDLLKAQEDLKLVTQL 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  +I   L+QN +       +L   E+ +    I +P++GT+   ++ +       ++ 
Sbjct: 295 FKSDILEKLQQNIQREKQLTLELEKNEQRQLASIIRAPVSGTVQQLKTHTKGGVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM I P   +  + A +  K I  V+ G  A ++   +   R       ++ I     + 
Sbjct: 355 LMVIAPEDDVLEVSALIQNKDIGFVEIGQEAVIKVETFPYTRYGYLYGKVKTITLDAIE- 413

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELR--NGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             + Q    +  I++I     +D + E++  +G            ++   ++ P+ ++  
Sbjct: 414 --HPQLGLVFNSIIEINKKTLTDGDKEIQLGSGMSVIAEIKTGERSVISFLLSPLEESIT 471


>gi|261868475|ref|YP_003256397.1| hemolysin D [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|293390489|ref|ZP_06634823.1| hemolysin D [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|261413807|gb|ACX83178.1| hemolysin D [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|290951023|gb|EFE01142.1| hemolysin D [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 477

 Score =  221 bits (562), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 64/428 (14%), Positives = 150/428 (35%), Gaps = 11/428 (2%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P  +    +L +   I +   SI   +EI  ++SG+        EIK   + ++K   
Sbjct: 55  NAPRFVSYSIMLFLTLAIIV---SIFSNVEIIATASGKFALSGRSKEIKPIENSLVKDIF 111

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +G  LL    +         K S+   +      KS L+ +      +    
Sbjct: 112 VKEGEYVKKGELLLKLTALGAEADTLKTKTSLSQAKLEEFRYKSLLEAVEKDQLPI---L 168

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +  +  L           + +     S+  +    K   +      +L    +      L
Sbjct: 169 DFSKIDLPFMTENDQKRVTLLIEEQFSTWQKQRHQKTLNLNKKEAEKLSYLARIKKYEGL 228

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +++ Q  L   + L++++A++++ +  +E     +  EL         +   +    +E 
Sbjct: 229 INTEQVRLDDFRALYKEHAIAKHTVLDEENKYQDAINELEVYKASLMQVENEVLLAKEEQ 288

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            L    +  +I   L+Q          +L    + ++   I +P++GT+   +  +    
Sbjct: 289 ELVTQLFKNDILDKLKQATDNVNLLTFELDKNNQRQQVSEIRAPVSGTVQQLKVHTIDGV 348

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              ++ LM +VP      + A +  K I  VK+G    ++   +   R       ++ I 
Sbjct: 349 VTTAETLMVVVPEEDSLEVTALIQNKDIGFVKEGQEVVIKVEAFPYTRYGYLTGKVKNIT 408

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
               +   + +    +  I+++        +  I L  G            ++   ++ P
Sbjct: 409 LDAIE---HPKLGLVFNTIIELDKKTLSAEEKEIPLSAGMEITAEIKTGMRSVISYLLSP 465

Query: 430 ITDNWPKI 437
           + ++  K 
Sbjct: 466 LEESIDKS 473


>gi|197285880|ref|YP_002151752.1| HlyD family toxin secretion protein [Proteus mirabilis HI4320]
 gi|194683367|emb|CAR44074.1| putative HlyD-family toxin secretion protein [Proteus mirabilis
           HI4320]
          Length = 454

 Score =  220 bits (561), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 67/426 (15%), Positives = 157/426 (36%), Gaps = 16/426 (3%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            +    P    R+  + I + +I  + W+ +  +++  S+ G+++      +I+      
Sbjct: 31  AVLEKPPTPYSRIIAIIISLSVIIFLLWAYIGKLDVLSSAIGKLVVSGYSQQIQIYEHSR 90

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+NG Q+ +G  LLT + +   + I+  K  I+NL   +     AL        +
Sbjct: 91  LSAIHVKNGQQVTKGEALLTLDILGVDEEINNLKNKIENLLL-LKIRYQALGQNTRPDTI 149

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +    ++E++    L          +         S+    + + +   N+L    + +
Sbjct: 150 DDFNLLNKEKKEAVLLS---------YQKEKDEFDASINHINSEIETNNKNKLLTHQEIN 200

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L  L ++ +K   + K L++K  +S  +  + ++ + +    ++    E   +     +
Sbjct: 201 SLNELKNNIEKRFNIKKKLYDKKIISTMEFLENKKELLEINQIIKRKSSELVILSSQEQQ 260

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                +        E     +Q +         L  ++K ++ K + SP+ GT+      
Sbjct: 261 YIKNRDRLEKQKHLEWHDKFKQYESGVFIYQQNLYHVQKRQQLKIVRSPVTGTVQQLAVH 320

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     Q SQ +M IVP ++       +  K I  +  G  A ++   +   R    +  
Sbjct: 321 TLGAVLQPSQAVMVIVPDTQHNVAEVNILNKDIGFIYPGQKAVIKIDAFPYTRYGTIEGT 380

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQ 424
           I  I     Q +   Q    Y V++++      ++    +L  G         +   +  
Sbjct: 381 IVNIAKDSIQHE---QLGLVYPVLIELDKQVMGEDEAQYKLATGMSLVADIKIEKRRVID 437

Query: 425 EIIHPI 430
            ++ PI
Sbjct: 438 YLLSPI 443


>gi|114762962|ref|ZP_01442392.1| type I secretion membrane fusion protein, HlyD family [Pelagibaca
           bermudensis HTCC2601]
 gi|114544286|gb|EAU47294.1| type I secretion membrane fusion protein, HlyD family [Roseovarius
           sp. HTCC2601]
          Length = 460

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 60/421 (14%), Positives = 140/421 (33%), Gaps = 18/421 (4%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           I W ++ P++  V + GE+  E +   ++S F G +    V  G  +  G  ++ F   E
Sbjct: 39  IGWMVVTPVDEIVRARGEVQPESSTQRLQSEFGGAVGAVHVTLGDSVEAGQLIVEFNAAE 98

Query: 92  TTDLIDLKK-----VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
               +   +     +++++ R     E+   DF   +   +   F S  +   +      
Sbjct: 99  LVSQLREARSHAFALALESERLTALVEERVPDFTPIRSRAIAPDFPSLPQVPSERPLGLP 158

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--------LENKSSLLRALLSSHQKD 198
                      ++V+ + K  L   R +   +          + ++   ++       + 
Sbjct: 159 EDDVDAAIARETAVFEARKAYLDTARKLVRQQESSARAELGAIASEWPTVQRQRMVASER 218

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           +  +++L +++   + DL    +       +L E       +   I EL           
Sbjct: 219 IETLQDLVDRSLAPRADLVDAIQTQADYDFQLSELTGRTAVLQARIAELEQRLAEVDVGE 278

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
               S  +        +   ++  L +   Q    +P+AG +          + +    +
Sbjct: 279 ADSASARISAVNSELFEVAERIARLIRRLAQTEFRTPVAGIVQSLPETVVGRFIEPGGLV 338

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            +IVP         +++P+ +  V  G    ++   +   R    +  + ++ P     D
Sbjct: 339 AEIVPRDVKLRFEGEISPRDVGFVTIGQPVRLKVDAFDFSRFGALEGKVTEVSPTTVLDD 398

Query: 379 NNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
              Q   +Y+V++ +             L  G  AE   T  + T+   +  PI  N   
Sbjct: 399 ---QGAPHYKVLVALPRHYLGNDPQRFTLLPGMTAEADITTGSKTVFAYLWKPIFTNLDL 455

Query: 437 I 437
            
Sbjct: 456 A 456


>gi|327188526|gb|EGE55737.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CNPAF512]
          Length = 481

 Score =  219 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 65/450 (14%), Positives = 150/450 (33%), Gaps = 27/450 (6%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P     + ++ ++  I L  W+ +  I+I  ++ G+I     V  ++  + G +    
Sbjct: 35  PSPVGTALIVIICLLATIAL-AWAYIGRIDIIATAQGKIQPVGRVKVVQPLYGGKVVVLP 93

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             NG+++ +G  L   +  E        + ++      +  E +            +   
Sbjct: 94  PPNGTEVHRGDVLFQLDSAEAIADERDAETAL----ASVHAEATRRREALVAAAAADDPR 149

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +R +   D   K       +    +  +  SL    +++R     R  L +      +L
Sbjct: 150 GARIDWAADVPEKLRKREDAILASELGQLDASLTSLRSQVRQKEGERNHLHDTLDEQASL 209

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           + + Q+ + M   L  +NA     +      +     +      +  + +  I+ L  E 
Sbjct: 210 VDTLQQRVAMRSTLVGENAGPVAGVIDATETLKTQRTQFAIQKGQLADAVAGIDVLKAEI 269

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               + ++ + +  L   +R   D   +L        Q T+ SPI G +  +   +    
Sbjct: 270 EKTRSTFVSDQTEKLGDAERQAEDLEQRLAKSRAELAQMTVRSPIDGVVQASVISTEGQV 329

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               + +++IVP   +  +   V  + I  V  G  A V+   +   +     A I KI 
Sbjct: 330 VTAGEEVLRIVPAGAMLELEVYVPNRDIGFVHVGQPAVVKLDAFPFTQYGTVPATIVKIA 389

Query: 372 PIISQQDNNLQTQE--------------------YYEVILKITDLAFS--DNNIELRNGF 409
                + +  + +E                     + V LK+   A      ++ L  G 
Sbjct: 390 TDAIPEPDAERREEDTAAALQTSLFGGAERTQNLVFAVTLKLEQNAMPADGADVSLSPGM 449

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            A       +  +   ++ P+ +   +  +
Sbjct: 450 SATAEVRTGSRRILAYVLSPLVEVASEAMK 479


>gi|119474727|ref|ZP_01615080.1| putative toxin secretion transmembrane protein [marine gamma
           proteobacterium HTCC2143]
 gi|119450930|gb|EAW32163.1| putative toxin secretion transmembrane protein [marine gamma
           proteobacterium HTCC2143]
          Length = 452

 Score =  219 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 67/447 (14%), Positives = 145/447 (32%), Gaps = 23/447 (5%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M+   +  L       L    +LS+     +++ S  + IEI    +G+I+    V  ++
Sbjct: 1   MNDRGYLELSSPT---LHLSIILSLTIFFAILSASFFIDIEIIAQGAGKIIPAAKVQVVQ 57

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S +SG +K   V+NG ++ +G  L+  +  +    +   K  I+ L       +S L   
Sbjct: 58  SEYSGQVKSIFVKNGVRVDKGQLLIELDSTDARAQLSTVKEEIQRLTIERYRIRSLLVEF 117

Query: 121 NNKY---------------DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           +N                 D+  +          DF   +      +    I+    SL 
Sbjct: 118 SNASSADNFSKLNASLSLSDITAENILEINHSGEDFKQPFLRDQHGLMTSEIAEFRSSLA 177

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               ++ +   +   +E     + ALL  H++       L  K  +S+         +  
Sbjct: 178 SFSAQIDANNKSHSIIEANIERIDALLLIHEERHQASTTLSRKGIISRASYLNTIEHLTN 237

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
              + + ++ E       +  +  E     +    +        +   A  +       +
Sbjct: 238 LQKQRKIHLRELAQKRSIVRRIRAEQLKYQSGLRSKYFLRKSAIESRIAILLQDQITRRR 297

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 + +PI G +      +  +        M IVP+     +   V  + +  V+ G
Sbjct: 298 KMANMNLRAPIDGIVDKLNIHTIGSIIMSGAKTMNIVPYHGTPILEVMVANQDVGFVRTG 357

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI-- 403
               ++   +   R    K ++  I    ++   N      + + ++         ++  
Sbjct: 358 QRVNIKLSAFPSERFGHVKGMVTHISADATEMAANSWG---FSIRIEPESAYLKTADVQH 414

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           +LR G  A V     + TL      PI
Sbjct: 415 KLRPGMTARVDIITGSRTLISYFFGPI 441


>gi|163732493|ref|ZP_02139938.1| putative HlyD family secretion protein [Roseobacter litoralis Och
           149]
 gi|161393853|gb|EDQ18177.1| putative HlyD family secretion protein [Roseobacter litoralis Och
           149]
          Length = 453

 Score =  219 bits (558), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 70/427 (16%), Positives = 165/427 (38%), Gaps = 24/427 (5%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             K +    ++ +     WS + P+   V+  G I  E     I+    GI+ +  V++G
Sbjct: 42  YAKSVIWTIVLAVGAFFYWSSVTPVYEVVTGEGTIKPEGLSTRIEHLEGGIVNEIAVQDG 101

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  +L  +    T +I  +   I  L   +    +  + ++    V     E R+
Sbjct: 102 DIVQPGQLILQLD----TQIIQSELAQIDTLLTQVQESIARYETISAISFVTLDDAELRQ 157

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
              +  + + +   S+     I ++     +  T  ++I+ N   L  + ++ +A    +
Sbjct: 158 MTSISIISEVNYRLSQ-----IQTIRSQKSVASTEQQAIHANMESLRQELAIQQAQFDRY 212

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+            +VS N   + +R   +    + +   E + +   I +L        
Sbjct: 213 QRAGF-------NGSVSLNRREELQRENLRLESSIAQLSGEVRILDARIEQLESSERELI 265

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A + ++ +  L++ +   A  +   T L    ++  I+SP++G +      +     Q  
Sbjct: 266 AQFRRDAALQLDEKRTELAGLLETRTALNFQIQRSRIVSPVSGMVNAISVQNLGEVVQPG 325

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + +++I+P +  T+   ++   +I  V  G +A+V+   Y   R    +A++E I P   
Sbjct: 326 EVIVEIIPSTGQTFAEIEIAADRIGGVTPGSSASVKVLTYDFTRYGSLEAVVEHISPSSF 385

Query: 376 QQDNNLQTQEYYEVI-----LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            ++N    Q  + V      L IT++    +  ++  G        ++  T+   ++ P+
Sbjct: 386 TKEN---GQTVFRVRLGFQSLTITNVGQMPDGRKVTPGMTVVADIKSEGRTILSFLLKPL 442

Query: 431 TDNWPKI 437
                + 
Sbjct: 443 RIISDRA 449


>gi|17231732|ref|NP_488280.1| RTX toxin transporter [Nostoc sp. PCC 7120]
 gi|17133375|dbj|BAB75939.1| RTX toxin transporter [Nostoc sp. PCC 7120]
          Length = 523

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 91/477 (19%), Positives = 192/477 (40%), Gaps = 48/477 (10%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIK 60
           + F    + R  P    R  +L++IG+  + I W+    IE  V ++G++  E  V E++
Sbjct: 42  NDFEQSVVLRQSP-IWSRTIMLTLIGLACVGIGWAYFAKIEQVVPATGQLKPEGTVKEVQ 100

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P +G++K+  V+NG  + +G  LLTF+ + T   ++  +   + L     T +  +   
Sbjct: 101 APVNGVVKEVFVKNGETVNKGDLLLTFDQVTTVAQLNSLEKVRRALTQENQTYRRLMRST 160

Query: 121 NNKYDVLE--KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                 LE  ++   +E   L          +++    +++    + +     + + + +
Sbjct: 161 GGIASELEFVRSRLPQEATFLLRSRAALVAENELLRTQLNNATTGIGLDSDEQKQLQVAK 220

Query: 179 LDLENKSSLL---------------------RALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            +L+++++                       ++ L+  Q+ L  +K L E+  +SQ    
Sbjct: 221 TELDSRAAAAGLEVSKIQKQLTQTTVKLQDTQSSLAIQQRILDKIKILAEEGGISQLQYL 280

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE---------- 267
            Q++ V  +  E+ + + EQK +   I +   +     AN  K I   +           
Sbjct: 281 NQQQQVQTTAAEVAQLVEEQKRLQFDIEKNQQQVTNTVANSDKNILEKIADNKKRIAEID 340

Query: 268 --------QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                    N+R  AD  SK++  ++  + + + +P+AGTI   ++ ++   A  +Q L+
Sbjct: 341 SQFMRIVLDNERNLADITSKISQAQQDLKYQELRAPVAGTIFDLKANNTGFVANPTQKLL 400

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +IVP ++       +T K I  V+KG    VR   +   +    K  I  I     Q D 
Sbjct: 401 QIVP-NENFIAEVFITNKDIGFVRKGMKVDVRIDSFPFSQFGDIKGEIIDIGSDALQPDE 459

Query: 380 NLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTA-KNTTLAQEIIHPITDN 433
             +   +    +K+        D +I L++G          +  T+        T+ 
Sbjct: 460 IYKFYRF-PARIKLNQQYLQVQDKHISLQSGMSISANIKVREERTVLSLFTEMFTNQ 515


>gi|153871092|ref|ZP_02000350.1| secretion protein, HlyD family [Beggiatoa sp. PS]
 gi|152072446|gb|EDN69654.1| secretion protein, HlyD family [Beggiatoa sp. PS]
          Length = 346

 Score =  219 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 112/348 (32%), Gaps = 15/348 (4%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +  +D   +  +   +++   +   +    +       +             +L     +
Sbjct: 1   MRIDDTRFSASMRESQITSSTMEAKMARLTAEAQGKPFQLP----------RRLKTTQKE 50

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                  +       +  ++ +   +         +L++K   L+   +  Q++L + + 
Sbjct: 51  LFLNERALAQSRQQELQANINILNQQKEQKKHEINELKSKQQQLQHSYNLVQRELKLTQP 110

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L  K  +S+ DL + +R       E              I E   +       +  +   
Sbjct: 111 LVRKGVMSEVDLLRLQREASTLKAERDGTRLSIPRTEAAIAEAERKIEELKVAFQTQALA 170

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +L   +   +        LE    +  + S + GT+   +  +     Q    L++IVP 
Sbjct: 171 ELNDIKAELSRLSESERALEDRVRRTEVRSLVKGTVKQIKVKTIGGVIQPGMDLVEIVPL 230

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                I A++ P  I  +  G  A V+F  Y        KA +E I         N + +
Sbjct: 231 EDSLLIEAQIRPSDIAFLHPGQKAMVKFTAYDFSIFGGLKAALEHISADTIM---NERGE 287

Query: 385 EYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            ++ ++L+     L   +  + +  G    +       +L   ++ PI
Sbjct: 288 PFFLILLRTERKFLGTENKPLPIIAGMTVNIDILTGKKSLLDYLLKPI 335


>gi|223041172|ref|ZP_03611425.1| HlyD-family secretion protein [Campylobacter rectus RM3267]
 gi|222877569|gb|EEF12697.1| HlyD-family secretion protein [Campylobacter rectus RM3267]
          Length = 433

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 61/431 (14%), Positives = 157/431 (36%), Gaps = 23/431 (5%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            ++      L R+ L  ++  +   T W IL  +++ VS+ G+++    +  +K   SG+
Sbjct: 17  EIEDKPLNPLGRIILYLVLATMVFGTAWLILAKVDVVVSAQGKVIPSGEIKILKPLESGV 76

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + K  V+   ++ +G  L+  +   T                 + +++  L  +N+   +
Sbjct: 77  VSKIFVKESDRVKKGDILIQIDPTVTD--------------ASLSSKQDDLAVINSDIAL 122

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L  A  +      D + K +S+   ++N     +  + +    ++ S  L+    E++ +
Sbjct: 123 L-YALINESNLSKDEINKLNSSQLNLYNSQRQILASTYESNKAKLNSAKLDIKANESEVN 181

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L  LL+  ++    ++ + +   +++ +  +  + +     +    ++  K   + + E
Sbjct: 182 RLSLLLNKEKEAKVRLQKVLD--LIAKKEYEEVSKNIINLKEQRDIALYRLKESNKKLEE 239

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           + +E                   ++   +  +++  +  + + + I SP+ G +      
Sbjct: 240 IIEENEKAIKTIKSSWIETSLGKEKEKRELSAQINAILFSNKTQQIKSPVDGFVGKLLIH 299

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +  L+ IVP      I+A V  K I  +K G    ++   ++  +       
Sbjct: 300 TEGGVVSPNDNLISIVPSDAPLIIKANVLNKDIGFLKLGQEVAIKIDTFSFQKYGLLHGN 359

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQ 424
           I +I     + +        YE+ +K   L          L  G             + +
Sbjct: 360 IIEISKDAIEDEKLGLI---YEIKIKPNSLDIKVEGEIKRLEIGMSVIAEVKTGKRRVIE 416

Query: 425 EIIHPITDNWP 435
             I+PI     
Sbjct: 417 LFIYPIIKYMD 427


>gi|282599807|ref|ZP_05971942.2| RTX toxin transporter [Providencia rustigianii DSM 4541]
 gi|282567902|gb|EFB73437.1| RTX toxin transporter [Providencia rustigianii DSM 4541]
          Length = 405

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 72/414 (17%), Positives = 158/414 (38%), Gaps = 15/414 (3%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           +G+   + WS    ++I  ++ G+++       I++     +++  VE+G  + QG PLL
Sbjct: 1   MGVFIALAWSYFGKLDIQATTQGKLIVSGRTQTIQAFELSRLQQIHVEDGQLVQQGDPLL 60

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           + + +     +D   +S+   +    +E+     L ++  + +     +  QL     K 
Sbjct: 61  SVKVLG----VDQDILSLHYQKNFHASEQLIHHALIHQQHIEDT---PQYMQLSLTEQKR 113

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                +       ++   +  +L   R  Y  R   E +   +  L+ + +K L    +L
Sbjct: 114 TQLSYQTIKKEYETLLNEITNELQLNRVNYHAR---ERELKDINTLMGNIRKRLNAHNSL 170

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +K  +SQ +  +QER +  +  E      E   +    + L ++     A   +E    
Sbjct: 171 SQKQLISQKEFLEQERELLIAKKEKTTKQSELSILDSQHHSLQEKLERIKAQKYQEWHEK 230

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
            +Q +  F     +L   ++  + + I +P+ GT+    +++     Q +Q LM IVP++
Sbjct: 231 AQQAEFKFVSLEQELIKNQERNQLEVIRAPVDGTVQQITTYTLGAVLQPAQQLMVIVPNN 290

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
            +     K+  K I  +++G  A V+   +   R    +  +  I    +  +N      
Sbjct: 291 HVQLAEVKILNKDIGFIQEGLKADVKIDAFPYTRYGTIEGELLSISRDSTLDENLGLV-- 348

Query: 386 YYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
            Y   + +T          IEL  G             +   ++ PI +     
Sbjct: 349 -YLAQIGLTKKQLLVEGKQIELTPGLSIVAEIKTDKRRIIDYLLSPINEYTSTA 401


>gi|1173324|sp|Q08633|RTX3D_ACTPL RecName: Full=RTX-III toxin determinant D; AltName: Full=APX-IIID;
           AltName: Full=Cytolysin IIID; Short=CLY-IIID; AltName:
           Full=Toxin RTX-III secretion protein D
 gi|470687|gb|AAA21926.1| RTX toxin [Actinobacillus pleuropneumoniae serovar 2]
          Length = 477

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 65/420 (15%), Positives = 162/420 (38%), Gaps = 8/420 (1%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   I  SI+  +EI  S++G+++   +  EIK   + ++K   V++G  
Sbjct: 58  RLIAYLIMLFLFLAIVISIISKVEIVASATGKLVFSGHSKEIKPIENALVKDIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  LL    +         KVS+   R      KS L  + +    L    +  +  
Sbjct: 118 VEKGQLLLNLTALGCDADKQKTKVSLGLERLDGYRYKSLLYSIEHNRLPL---LDFNQAD 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                 +  +    +      +  +    K    +     +  +        +     ++
Sbjct: 175 FDSVQEEDKTGARHLITEQFETWQKQKYQKELAYQRKQAEKQTVLANIRKYESASRIEKE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L+ +K L++  ++S+++L  QE    +++ EL       K +   + +  ++  L    
Sbjct: 235 KLSDLKKLYDVKSISKHELLAQENRYVEASNELSVYQSHLKEVESDLLKAQEDLKLVTQL 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  +I   L+QN +       +L   E+ +    I +P++GT+   ++ +       ++ 
Sbjct: 295 FKSDILEKLQQNIQREKQLTLELEKNEQRQLASIIRAPVSGTVQQLKTHTKGGVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM I P   +  + A +  K +  V+ G  A ++   +   R       ++ I     + 
Sbjct: 355 LMVIAPEDDVLEVSALIQNKDVGFVEIGQEAVIKVETFPYTRYGYLYGKVKTITLDAIE- 413

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELR--NGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             + Q    +  I++I     +D + E++  +G            ++   ++ P+ ++  
Sbjct: 414 --HPQLGLVFNSIIEINKKTLTDGDKEIQLGSGMSVIAEIKTGERSVISFLLSPLEESIT 471


>gi|223041415|ref|ZP_03611618.1| ApxIID [Actinobacillus minor 202]
 gi|60476779|gb|AAX21417.1| ApxIID [Actinobacillus porcitonsillarum]
 gi|190692229|gb|ACE87885.1| ApxIID [Actinobacillus minor 202]
          Length = 478

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 65/421 (15%), Positives = 159/421 (37%), Gaps = 9/421 (2%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   I  SI   +EI  +++G++       EI+   + ++K+  V++G  
Sbjct: 58  RAVAYLIMLFLAISIIISIFSKVEIVATATGKLTFSGRSKEIEPIENALVKEIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L++   +   + +   + S+   R       + L+ +  +        +    +
Sbjct: 118 VEKGDLLISLSALGVEEELKKSRSSLALARLEKYRYSTLLESIEKEKL---PVIDFSHME 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     +       +     ++  +    KL   +     +  L         L     +
Sbjct: 175 LDRVSEEERLRIKHLIEEQYTTWQKQKSQKLLAYKRKQAEKQTLLTYIRKYEGLFKIENE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
               +K L+ + +VS+++L  QE    ++  EL  +      +   + ++ +E  L    
Sbjct: 235 KYQDLKKLYNQKSVSRHELLVQENKSIEAKNELDVSHSRLNELEHDLLQVQEEIFLTTQL 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  EI   L+ +         +L    + ++   I +PI+GTI   +  +  +    ++ 
Sbjct: 295 FKSEILEKLKHHVENEKQLSLELEKNYQRQQASMIRAPISGTIQQLKVHTIGSVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM I P   L  + A +  K I  +K+G  A ++   Y   R    +  ++ I     + 
Sbjct: 355 LMIITPKEDLLEVTALIQNKDIGFIKQGQDAIIKVDTYPYTRYGYLQGKVKHISLDAIE- 413

Query: 378 DNNLQTQEYYEVILKITDLA---FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
             + Q    +  I+K  +     F +  I+L +G            ++   ++ P+ + +
Sbjct: 414 --HPQLGLVFNAIIKFNEGTQNLFDEKGIKLGSGMTITAEIKTGMRSIISYLLSPLEEGF 471

Query: 435 P 435
            
Sbjct: 472 T 472


>gi|116249616|ref|YP_765454.1| putative transmembrane HlyD type I secretion protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254264|emb|CAK03882.1| putative transmembrane HlyD type I secretion protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 480

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 59/440 (13%), Positives = 141/440 (32%), Gaps = 24/440 (5%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L+   P  + RMTL  +   I+  I W+ +  I+  V + G+++     + ++   + I
Sbjct: 51  ELEERAPPRVARMTLYCVTALIVSAIIWASVSSIDEVVIAPGKLVTTQPTIVVQPLETSI 110

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+  +V+ G  +  G  L T +   +   +D ++     L   +   ++ L   +     
Sbjct: 111 IRTIEVKAGEVVHAGQTLATLDATFSQADVDQQQAKFSALDAQVRRIEAELAGNDYTKMA 170

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E   +  + QL      ++    + F   I+    +L     +   +   R  L    +
Sbjct: 171 GETPDQMLQAQLFGQRQAFYMAQLQNFEQQIAGQSAALAASRNQEAVLNDRRDGLSQIEA 230

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                           + L++K + S   L            +L               +
Sbjct: 231 A--------------RERLYDKQSGSLITLLGSRDARLDVESDLTAVRGRADEAAHAYAK 276

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +      ++ +     L + +        +L  +E  R    + +P    ++     
Sbjct: 277 LRADRQAFIEDFRRAAMEQLVELRGQRDMADEELKKMELRRNMVALTAPADAVVLDLAQR 336

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S  +  ++++P++ +VP +        +  + I  V  G  A ++   Y   +       
Sbjct: 337 SVGSVVREAEPVVTLVPINVPLEAEVSINTRDIGRVAVGKEARIKLDAYPFQKYGTASGE 396

Query: 367 IEKIDPIISQQDNNLQTQ-------EYYEVILKITDLAFSDNN--IELRNGFPAEVLFTA 417
           +  I           QT+        ++   + + D   +     + L  G         
Sbjct: 397 VRTISQDTFLTGQQEQTETPSQPAAPFFRARILLADTRLNAAGMPVRLLPGMTVSTEIKV 456

Query: 418 KNTTLAQEIIHPITDNWPKI 437
            N T+    ++P+       
Sbjct: 457 GNRTVISYFLYPLLRGLDNA 476


>gi|221640616|ref|YP_002526878.1| Type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sphaeroides KD131]
 gi|221161397|gb|ACM02377.1| Type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sphaeroides KD131]
          Length = 433

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 60/422 (14%), Positives = 151/422 (35%), Gaps = 12/422 (2%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            +   +L +   + L +W++   ++ +V + G +L E     +++   G++++  V  G 
Sbjct: 19  FQAALVLILSLTVSLGSWAVYARLDGAVITQGVVLAESRRKTVENLEGGLLERLLVAPGD 78

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++  G P+     ++  + +             ++ E+  L F   +           + 
Sbjct: 79  RVAAGQPVAQLATVQDRERL-----------IQLEAEREGLLFDIWRLRAEAAGARVLDP 127

Query: 137 QLLDFL-GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                   +  +   ++F   + +    +     ++  +       + ++      + S 
Sbjct: 128 ATAPGPDAERTAAQLRLFQSRLHAHRDRIGSLDRQIELLIAQGAANDAQARAADLQIESW 187

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + +   +  L ++ A  +  L + +R +   T    + +   +     +     + +   
Sbjct: 188 RAERADLVTLVDRGASPRQKLVELDRNITTLTGTREQYLALARAARADVERARMDRSTAG 247

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L E++  L    R      +++       E++T+ +P AG +V   + +        
Sbjct: 248 QLRLAEVAEQLAAAGRQLPGLEAQIRATRDVLERRTLRAPQAGLVVEVPTVTPGAVIGSG 307

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             +M+IVP      I+ +V P+ I +V+KG  A VR   Y        +  +  + P + 
Sbjct: 308 MAVMEIVPDLDHLVIQMRVPPEAIDNVRKGGLARVRLTAYRRALAPVVRGQVSFVSPDLI 367

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
           +   +  T     V L    LA   + + L  G P EV  +         ++ PI  +  
Sbjct: 368 EDPRDGTTYFEARVTLDPESLAEQPDWVRLSAGMPVEVSVSTGERRAGDYLLEPILRHLR 427

Query: 436 KI 437
             
Sbjct: 428 GA 429


>gi|298565983|dbj|BAJ09611.1| membrane fusion protein [Pasteurella pneumotropica]
          Length = 325

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 64/372 (17%), Positives = 130/372 (34%), Gaps = 70/372 (18%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLE 128
           V+ G  + +G  LLT +D  ++ ++   +  ++NLR     +  E +    L    D+ E
Sbjct: 3   VKEGEIVEKGQVLLTLDDTRSSAILRESEAKVQNLRAVVARLQAESAG-KPLVFADDIPE 61

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                          V R       R +++      L    +LL
Sbjct: 62  DV-----------------------------VSRETAAYNARRKAMLDAVEGLAQSKALL 92

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                   K++ + + + +K  VSQ +L + +R       ++ E                
Sbjct: 93  D-------KEIAITQPMVKKGVVSQVELLRMQRQSSDFAQQITE---------------- 129

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                    Y  + + +L Q +   A     + +     E+  I +P+ G +   +  + 
Sbjct: 130 -----RRNRYSADANNELVQTESELAQARENMAMRADPVERSQIKAPLRGVVKNIRINTV 184

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q  Q +++IVP      ++A ++PK +  ++ G  A V+   Y        +  + 
Sbjct: 185 GGVVQAGQDILEIVPLDDTLLVQAYISPKDVAFIRPGQPALVKISAYDYSIYGGLEGKVT 244

Query: 369 KIDPIISQQDNNLQT------QEYYEVILKITDLAFSD---NNIELRNGFPAEVLFTAKN 419
            I P   Q +           Q YY ++++    + +D     +++  G  A V      
Sbjct: 245 LISPDTLQDERRRSELNLNADQAYYRILIETQGTSITDSKGQKLDITPGMTATVDIKTGE 304

Query: 420 TTLAQEIIHPIT 431
            T+ Q +I PIT
Sbjct: 305 KTVFQYLIKPIT 316


>gi|241258831|ref|YP_002978715.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240863301|gb|ACS60964.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 480

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 58/440 (13%), Positives = 141/440 (32%), Gaps = 24/440 (5%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L+   P  + RMTL  +   I+  I W+ +  I+  V + G+++     + ++   + I
Sbjct: 51  ELEERAPPRIARMTLYCVTALIVSAIIWASVSSIDEVVIAPGKLVTTQPTIVVQPLETSI 110

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+  +V+ G  +  G  L T +   +   +D ++     L   +   ++ L   +     
Sbjct: 111 IRTIEVKVGEVVHAGQTLATLDATFSQADVDQQQAKFSALDAQVRRIEAELAGDDYTKMA 170

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +   +  + QL      ++    + F   I+    +L     +   +   R  L    +
Sbjct: 171 GDAPDQVLQAQLFGQRQAFYMAQLQNFEQQIAGQSAALAASRNQEAVLNDRRDGLSQIEA 230

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                           + L+ K + S   L            +L               +
Sbjct: 231 A--------------RERLYNKQSGSLITLLGSRDARLDVESDLTAVRGRADEAAHAYAK 276

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +      ++ +     L + +        +L  +E  R    + +P    ++     
Sbjct: 277 LRADRQAFIEDFRRAAMEQLVELRGQRDMADEELKKMELRRNMVALTAPADAVVLDLAHR 336

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S  +  ++++P++ +VP +        +  + I  V  G  A ++   Y   +       
Sbjct: 337 SVGSVVREAEPVVTLVPINVPLEAEVSINTRDIGRVAVGKEARIKLDAYPFQKYGTATGE 396

Query: 367 IEKIDPIISQQDNNLQTQ-------EYYEVILKITDLAFSDNN--IELRNGFPAEVLFTA 417
           +  I           QT+        +++  + + D   +     + L  G         
Sbjct: 397 VRTISQDTFLTGQQEQTETPSQPAAPFFKARILLADTRLNAAGMPVRLLPGMTVSTEIKV 456

Query: 418 KNTTLAQEIIHPITDNWPKI 437
            N T+    ++P+       
Sbjct: 457 GNRTVISYFLYPLLRGLDNA 476


>gi|282896359|ref|ZP_06304381.1| Secretion protein HlyD [Raphidiopsis brookii D9]
 gi|281198855|gb|EFA73734.1| Secretion protein HlyD [Raphidiopsis brookii D9]
          Length = 521

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 84/474 (17%), Positives = 174/474 (36%), Gaps = 63/474 (13%)

Query: 17  LKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             R  +++++ +      W+    IE  V ++G++  E  V ++++P SG+++   V++G
Sbjct: 54  WSRTIMITLMLVACFGVGWAYYAKIEQVVPATGQLKPEGTVKDVQAPISGVVESIHVKDG 113

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE--- 132
            ++ +G  LLTFE I T   +     S+ N+R  +  E      L N    +        
Sbjct: 114 QEVKKGDLLLTFESIATRAELG----SLNNVRAVLIRENDIYRRLMNASSAVSSELNFLG 169

Query: 133 ---SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                E   L          +++    + +    +   +   + + + R +LE++S+  +
Sbjct: 170 GGLPAEAAFLLKSRISLVEENQLLRSQLGNSNAQVGGGIDEQQRLIVARKELESRSNAAK 229

Query: 190 ---------------------ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
                                  LS  Q  L  ++ L ++  +SQ     Q++ V     
Sbjct: 230 FEVEKIKKQLSQTIVKRKDTQNSLSIQQGILHRVEVLAKEGGISQLQYLNQQQQVQNLKA 289

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE------------------QNQ 270
           E+ + + E+K +   I     E     A   K +   +                   +N+
Sbjct: 290 EIAQLLEEEKRLQFDIQRAQQEVANTVAVTDKNVLEQIATNKKRMAEIDSQFMRIILENE 349

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           +  +D  SK++  +   + + + +P++G I   Q+ +    A  +Q L++IVP +     
Sbjct: 350 QRLSDINSKISQTKLNVKYQELRAPVSGIIFDMQAKNPGFVANPTQKLLQIVP-NDKYIA 408

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE-- 388
              +T K I  VK+G    VR   +        K  +  I       D   QT ++Y   
Sbjct: 409 EVFITNKDIGFVKEGMKVDVRIDSFPFTEFGDIKGKVTNIGSDALPPD---QTHQFYRFP 465

Query: 389 VILKITDLAFSDNN--IELRNGFPAEVLFTA-KNTTLAQEIIHPITDNWPKIFE 439
             + +           I L++G          +  ++        TD +   FE
Sbjct: 466 ARVSLNKQTIESQGRTIALQSGMAITANIKVREERSVMS----LFTDVFTNQFE 515


>gi|126463542|ref|YP_001044656.1| HlyD family type I secretion membrane fusion protein [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126105206|gb|ABN77884.1| type I secretion membrane fusion protein, HlyD family [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 433

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 60/422 (14%), Positives = 151/422 (35%), Gaps = 12/422 (2%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            +   +L +   + L +W++   ++ +V + G +L E     +++   G++++  V  G 
Sbjct: 19  FQAALVLILSLTVSLGSWAVYARLDGAVITQGVVLAESRRKTVENLEGGLLERLLVAPGD 78

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++  G P+     ++  + +             ++ E+  L F   +           + 
Sbjct: 79  RVAAGQPVAQLATVQDRERL-----------IQLEAEREGLLFDIWRLRAEAAGARVLDP 127

Query: 137 QLLDFL-GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                   +  +   ++F   + +    +     ++  +       + ++      + S 
Sbjct: 128 ATAPGPDAERTAAQLRLFQSRLHAHRDRIGSLDRQIELLIAQGAANDAQARAADLQIESW 187

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + +   +  L ++ A  +  L + +R +   T    + +   +     +     + +   
Sbjct: 188 RAERADLVTLVDRGASPRQKLVELDRNITTLTGTREQYLALARAARADVERARMDRSTAG 247

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L E++  L    R      +++       E++T+ +P AG +V   + +        
Sbjct: 248 QLRLAEVAEQLAAAGRQLPGLEAQIRATRDVLERRTLRAPQAGLVVEVPTVTPGAVIGSG 307

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             +M+IVP      I+ +V P+ I +V+KG  A VR   Y        +  +  + P + 
Sbjct: 308 TAVMEIVPDLDHLVIQMRVPPEAIDNVRKGGLARVRLTAYRRALAPVVRGQVSFVSPDLI 367

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
           +   +  T     V L    LA   + + L  G P EV  +         ++ PI  +  
Sbjct: 368 EDPRDGTTYFEARVTLDPESLAEQPDWVRLSAGMPVEVSVSTGERRAGDYLLEPILRHLR 427

Query: 436 KI 437
             
Sbjct: 428 GA 429


>gi|77464702|ref|YP_354206.1| HlyD family protein secretion protein , membrane fusion protein
           [Rhodobacter sphaeroides 2.4.1]
 gi|77389120|gb|ABA80305.1| protein secretion protein, HlyD family, membrane fusion protein
           [Rhodobacter sphaeroides 2.4.1]
          Length = 433

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 60/422 (14%), Positives = 151/422 (35%), Gaps = 12/422 (2%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            +   +L +   + L +W++   ++ +V + G +L E     +++   G++++  V  G 
Sbjct: 19  FQAALVLILSLTVSLGSWAVYARLDGAVITQGVVLAESRRKTVENLEGGLLERLLVAPGD 78

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++  G P+     ++  + +             ++ E+  L F   +           + 
Sbjct: 79  RVAAGQPVAQLATVQDRERL-----------IQLEAEREGLLFDIWRLRTEAAGARVLDP 127

Query: 137 QLLDFL-GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                   +  +   ++F   + +    +     ++  +       + ++      + S 
Sbjct: 128 ATAPGPDAERTAAQLRLFQSRLHAHRDRIGSLDRQIELLIAQGAANDAQARAADLQIESW 187

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + +   +  L ++ A  +  L + +R +   T    + +   +     +     + +   
Sbjct: 188 RAERADLVTLVDRGASPRQKLVELDRNITTLTGTREQYLALARAARADVERARMDRSTAG 247

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L E++  L    R      +++       E++T+ +P AG +V   + +        
Sbjct: 248 QLRLAEVAEQLAAAGRQLPGLEAQIRATRDVLERRTLRAPQAGLVVEVPTVTPGAVIGSG 307

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             +M+IVP      I+ +V P+ I +V+KG  A VR   Y        +  +  + P + 
Sbjct: 308 TAVMEIVPDLDHLVIQMRVPPEAIDNVRKGGLARVRLTAYRRALAPVVRGQVSFVSPDLI 367

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
           +   +  T     V L    LA   + + L  G P EV  +         ++ PI  +  
Sbjct: 368 EDPRDGTTYFEARVTLDPESLAEQPDWVRLSAGMPVEVSVSTGERRAGDYLLEPILRHLR 427

Query: 436 KI 437
             
Sbjct: 428 GA 429


>gi|78033515|emb|CAJ30133.1| putative HlyD secretion protein [Magnetospirillum gryphiswaldense
           MSR-1]
 gi|144901176|emb|CAM78040.1| HlyD secretion protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 458

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 61/389 (15%), Positives = 136/389 (34%), Gaps = 11/389 (2%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                +         R+  + +       I W+ L  ++I  S++G+I+  + V  I+  
Sbjct: 62  PAALEVAETPANPAARIVAMVLAAAFLFTIVWASLGELDIVASATGKIIPSERVKSIQPL 121

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            + II+   V+ G ++  G  L+  E       +          R  +    + L     
Sbjct: 122 ETAIIRTIAVKEGQEVKAGDTLVVLEITGAGSDVSRLSADNVTARADVARLSALLQPDPA 181

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +   L         ++   L        K    G+S+     + +LT  R+      ++E
Sbjct: 182 QALRLPTDLSPELAEMHRSLLSAALAEHKAKLAGLSAELAKRQAELTTNRTDLKRLSNVE 241

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            K +           + T  + L  K   SQ D  + E+ + ++  + +           
Sbjct: 242 GKIA----------DETTRRQELATKGYGSQIDRLKVEKELAENQGQQQVLRARTAEAEA 291

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I  L  + N     + K+++  L + +   A     L      ++ +T+ +P+ G +  
Sbjct: 292 AILALQSQVNQAREEFRKDVTTKLSEARSKAASTEQDLAKAADRQKVQTLTAPVDGVVQQ 351

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +       +Q LM +VP   +  + AK+  K I  V++G  A ++   +   R   
Sbjct: 352 IEVHTIGGVVTPAQKLMTLVPKGAVLEVEAKLPNKDIGFVEEGQEAEIKIDAFPFTRYGT 411

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             A +E +     + +     +  +   +
Sbjct: 412 LPARVENVSLDAIKDEKEQDKEYTFPSHV 440


>gi|332559595|ref|ZP_08413917.1| HlyD family type I secretion membrane fusion protein [Rhodobacter
           sphaeroides WS8N]
 gi|332277307|gb|EGJ22622.1| HlyD family type I secretion membrane fusion protein [Rhodobacter
           sphaeroides WS8N]
          Length = 433

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 60/422 (14%), Positives = 151/422 (35%), Gaps = 12/422 (2%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            +   +L +   + L +W++   ++ +V + G +L E     +++   G++++  V  G 
Sbjct: 19  FQAALVLILSLTVSLGSWAVYARLDGAVITQGVVLAESRRKTVENLEGGLLERLLVAPGD 78

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++  G P+     ++  + +             ++ E+  L F   +           + 
Sbjct: 79  RVAAGQPVAQLATVQDRERL-----------IQLEAEREGLLFDIWRLRAEAAGARVLDP 127

Query: 137 QLLDFL-GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                   +  +   ++F   + +    +     ++  +       + ++      + S 
Sbjct: 128 ATAPGPDAERTAAQLRLFQSRLHAHRDRIGSLDRQIELLIAQGAANDAQARAADLQIESW 187

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + +   +  L ++ A  +  L + +R +   T    + +   +     +     + +   
Sbjct: 188 RAERADLVTLVDRGASPRQKLVELDRNITTLTGTREQYLALARAARADVERARMDRSTAG 247

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L E++  L    R      +++       E++T+ +P AG +V   + +        
Sbjct: 248 QLRLAEVAEQLAAAGRQLPGLEAQIRATRDVLERRTLRAPQAGLVVEVPTVTPGAVIGSG 307

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             +M+IVP      I+ +V P+ I +V+KG  A VR   Y        +  +  + P + 
Sbjct: 308 TAVMEIVPDLDHLVIQMRVPPEAIDNVRKGGLARVRLTAYRRALAPVVRGQVSFVSPDLI 367

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
           +   +  T     V L    LA   + + L  G P EV  +         ++ PI  +  
Sbjct: 368 EDPRDGTTYFEARVTLDPESLAEQPDWVRLSAGMPVEVSVSTGERRAGDYLLEPILRHLR 427

Query: 436 KI 437
             
Sbjct: 428 GA 429


>gi|303246857|ref|ZP_07333134.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio fructosovorans JJ]
 gi|302491874|gb|EFL51754.1| type I secretion membrane fusion protein, HlyD family
           [Desulfovibrio fructosovorans JJ]
          Length = 457

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 61/426 (14%), Positives = 157/426 (36%), Gaps = 16/426 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P   +    L +  I+  + ++ L  +   V++ G++++    V + +  + +I++  
Sbjct: 40  PTPVRYRLTLYLLLAFILCALLFACLAKVNRIVAAPGKLVSSRRNVTVAALETAVIRQIY 99

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G  + +G PL+  +       +  ++   ++L   +                L +A 
Sbjct: 100 VSAGQSVAKGDPLVALDPTLAQAGLVEREKDWQSLAAKVWRLTCETGGSCKPPAGLTEAD 159

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            + E  LL    + H+  ++     +  +   L                   +++  +  
Sbjct: 160 LALERGLLLARRQEHAAKAESLARQVRELSAKLATN--------------AAEAAKNKKQ 205

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           ++  +    M  +++++ A S+ +  + +     +  +L +   E   +   +     +A
Sbjct: 206 IALARDLEKMYADIYKQGASSKVEYMKAQSSRIDAEGQLTKLTSEAAELRESLARAEAQA 265

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               +N+  E ++DL +  R+ A    +    E  R+Q  + +P  G ++   + ++   
Sbjct: 266 RDFESNWQAEAAKDLAEASRSLAAADQEKRKAEHLRDQVILRAPEDGLVLDVAAKAAGAV 325

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           A Q + L+ IVP        A+V  + I  V+ G    ++F  +   R      ++  I 
Sbjct: 326 AGQGETLLTIVPRGDDLVAEAEVAAQDIGRVRIGDQVRLKFEAFPFQRHGTATGVVRTIS 385

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           P   ++      +  Y V   IT  A +    +  L  G             +   +++P
Sbjct: 386 PDAFEKQTQEGQRLVYRVRAAITQAALTNVPPDFHLFPGMAVTAEIKVGRRRVITYLLYP 445

Query: 430 ITDNWP 435
           +  ++ 
Sbjct: 446 LIRSFD 451


>gi|17230167|ref|NP_486715.1| hypothetical protein all2675 [Nostoc sp. PCC 7120]
 gi|17131768|dbj|BAB74374.1| all2675 [Nostoc sp. PCC 7120]
          Length = 507

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 74/470 (15%), Positives = 173/470 (36%), Gaps = 49/470 (10%)

Query: 8   NLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L     +   R  L +++ + I  + W+ +  IE +V + G++  +DNV E++ P  G+
Sbjct: 37  PLMLKQSSGWSRGILWTLMFVSIAAVAWASVSKIEQAVPAQGKLEPQDNVNEVQIPIEGV 96

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLID-------LKKVSIKNLRCHIDTEKSALDF 119
           +K   V++G ++  G  L++ +   +    +       + +   +  +  +  ++     
Sbjct: 97  VKTIHVKDGHRVKAGDLLVSLDPTVSQAQENSFQKVRTVLEQENQFYQAQLSGKEDTSPT 156

Query: 120 LNNKYDVL----EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           ++     +     +A    E +L       ++    +       V   L+   +R+ S  
Sbjct: 157 VSIPAQFVSLTRSRAVLLAENRLFQAQLDGNAGEMSLSAEQRQRVKSELEELTSRVTSAQ 216

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMK-------NLFEKNAVSQNDLNQQERIVYKSTL 228
           L    L+ + S     L S+Q+ L + +        L  +  +S+     Q++ V     
Sbjct: 217 LEIDQLQKQYSQADIKLKSNQEKLKVNEQILTDISELALEGGISRIQYLNQQQEVESIRA 276

Query: 229 ELRENIHEQKNM------------------LRHINELYDEANLEFANYLKEISRDLEQNQ 270
           E+ +   E+  +                   R +       +   A    ++S+ +  N+
Sbjct: 277 EIAQLQEEKIRLQAAIAQAQAKVQNTKDIDRRDLTARIGNNSQRIAEIDSQLSKAIVDNK 336

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           +  A+  S+L+   +  +   + SP+ G +   ++ +    A+ ++P++KIVP +     
Sbjct: 337 KRIAELDSQLSQTNQALKYSVVRSPVDGVVFDLKAHAPGFVAKSTEPVLKIVPQTN-LVA 395

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE-- 388
           +  +T + I  +++G    VR   +        K  +  I           Q Q YY   
Sbjct: 396 KVSITNQDIGFIREGMRVDVRIDSFPYSEFGDIKGTLTWIGSDA---LPPTQLQPYYTFP 452

Query: 389 VILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
             + +           I L++G         +  T+        TD + K
Sbjct: 453 ATVTLDQQYLLSQQRKIALQSGMSLNANIKIRERTVMS----IFTDFFNK 498


>gi|182676846|ref|YP_001830993.1| HlyD family type I secretion membrane fusion protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|182636476|gb|ACB97249.1| type I secretion membrane fusion protein, HlyD family [Beijerinckia
           indica subsp. indica ATCC 9039]
          Length = 481

 Score =  217 bits (553), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 65/457 (14%), Positives = 152/457 (33%), Gaps = 27/457 (5%)

Query: 4   FMWKNLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                +    P+ +    L +I +  +  + W+    I++   + G+I     V  I+  
Sbjct: 25  PAALAILETPPSPIGIALLCTICLLAVTALAWASFSRIDVIAVAQGKIQPAGRVKPIQPV 84

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G +   Q  NG  + QG  L+  +  +         +S+ + +  I   K+AL+    
Sbjct: 85  ETGKVIAIQAANGQHVKQGEILVALDPEDAQAETVALTMSLASFKAEILRRKAALEA--T 142

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           K  +L      R E+  +          +V    ++     ++  + + R     +  L 
Sbjct: 143 KEHLLRPLPLVRWEE--EIPRPIQEREERVLRGDLALFAAQIEGLVAQRRQKEAEQERLT 200

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +   ALL++  + + M + L + +A ++ +L           + L+    ++   + 
Sbjct: 201 KTIAAQEALLATLDQRVAMREALVQHSAGTRANLLDAIESRQYQDVILKTQQGQKAENVA 260

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +  L  +    +  +  E S+ L   +R   +   +L           + SPI GT+  
Sbjct: 261 SLAVLIQDIAKSYETFTAENSQKLADAERQADENAQRLVKARVKLGHMLLTSPIDGTVQA 320

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +        + +M+IVP + +  I   +  K    V+ G  A V+   +   R   
Sbjct: 321 LSVTTPGQVIASGEEIMRIVPDAPVLEIECYLQNKDSGFVRPGQEAVVKVESFPFTRFGT 380

Query: 363 FKAIIEKIDPIISQQDNNLQTQE--------------------YYEVILKITDLAF--SD 400
             A + ++      + +    +                      + V L++         
Sbjct: 381 LGADVVRVAQDAIPEPDAQLIEGNPAKSNRSTVFAGAQRVQNLVFPVTLRLAASTMIIEG 440

Query: 401 NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
             + L  G    V     +  +   +  P+ +     
Sbjct: 441 TPVPLSPGMAVSVEIKTGSRRVIDYLFSPLVEVVTSA 477


>gi|237801170|ref|ZP_04589631.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331024027|gb|EGI04084.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 274

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 93/271 (34%), Gaps = 3/271 (1%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              +    L    +    S L A   S ++ L+ ++ L +   +  N L + +R + +  
Sbjct: 2   QASIEGAGLQLAGMRRARSDLLAQADSLRQQLSNLEPLAQNGFIPGNRLLEFQRQLSQVQ 61

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             L +N  +   + + I E       +   Y KE+       Q        +L     + 
Sbjct: 62  QSLAQNAGDTGRIEQSIVESRLRIQQQREEYQKEVRSQWADAQVKALTLEQQLASAGFSL 121

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           +   IL+P  G  V     +     +  + L++IVP      +  ++  + I  V     
Sbjct: 122 QHSAILAPADGIAVNLGVHTEGAVVRAGETLLEIVPQGTRLEVEGRLPVQLIDKVASHLP 181

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELR 406
             + F  +   R  +    +  +     Q +     Q YY +   + D A    N + ++
Sbjct: 182 VDILFTAFNQSRTPRVSGEVSLVSADQMQDEKT--GQPYYVLRTSVGDAALEKLNGLVIK 239

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
            G PAE+       +L   +  P+ D     
Sbjct: 240 PGMPAEMFVRTGERSLLNYLFKPLLDRAGSA 270


>gi|66968575|ref|YP_245452.1| HlyD family secretion protein [Pseudomonas aeruginosa]
 gi|66862657|emb|CAI46957.1| HlyD-family secretion protein [Pseudomonas aeruginosa]
          Length = 471

 Score =  217 bits (552), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 132/398 (33%), Gaps = 6/398 (1%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            +  I++  +++G+I+       I+     ++K   V +G  +  G  L+  +   T   
Sbjct: 72  CIGEIDVVATATGKIVPSGKSKVIQPSEVAVVKAIHVYDGQTVKAGEVLVELDTQITGA- 130

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            D++++    L   +D+ +++      +      +   R  Q  +       +       
Sbjct: 131 -DVQRLQSDLLAAQVDSARASALLDAIEESREPTSLVGRIPQASESQ---QLSAQTWLRG 186

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
               +  +L+     +              + L+  L   Q+     K L +K  ++++ 
Sbjct: 187 QYLELQSALQQSDAEIAQRTAEIQAARAWVAKLQESLPIAQQLAADYKRLLDKAYIAKHA 246

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
             ++E+       EL         +     +         A   + +   L ++++  A 
Sbjct: 247 YLEKEQQRLNQERELAVQQARVLELQAAKQQAESRRQSVLAQTRRAMLDLLHESEQRAAA 306

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +L+  E+      + +P+ GT+      ++     ++QPLM IVP ++   + A + 
Sbjct: 307 LQQELSKAEQRNRLMHLTAPVDGTVQQLAIHTAGGVVTEAQPLMVIVPSNQPVEVEALLE 366

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            K I  V+ G    V+   +   +       ++ I     + +          + LK   
Sbjct: 367 NKDIGFVRPGQEVEVKVDTFTFTKYGVVHGTVQSISDDAIEDERLGLVYS-TRIQLKENS 425

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           +      + L  G             +    + P+   
Sbjct: 426 ILVGSQQVPLTPGMSIRAEVKTDKRKVIDYFLSPLQQY 463


>gi|6531349|gb|AAF15372.1|U66588_4 PaxD [Pasteurella aerogenes]
          Length = 477

 Score =  217 bits (552), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 62/420 (14%), Positives = 162/420 (38%), Gaps = 8/420 (1%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ ++  I  SI+  +EI  S++G+++   +  EIK   + ++K   V++G  
Sbjct: 58  RLIAYLIMLFLLLAILISIVSKVEIVASATGKLVFSGHSKEIKPIENALVKDIFVKDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + QG  LL           DL+K  +      +D  + ++   + +++ L    +  +  
Sbjct: 118 VKQGQLLLNL--TALGADADLQKTQVALGLEKLDGYRYSVLLYSIEHNRL-PLLDFNQAN 174

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                 +  +    +      +  +    K    +     +  +              ++
Sbjct: 175 FNAVKEEDKTNTRHLITEQFETWQKQKYQKELAYQRKQAEKQTVLANIRKYETTSRIEKE 234

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L+  K L+   ++S+++L  QE    ++  EL       K +   + +  +E  L    
Sbjct: 235 KLSDFKKLYHVKSISKHELLAQENRYVEAINELSVYQSHLKEVESDLLQAKEELELVTQL 294

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           +  ++   L+QN++       +L   E+ +    I +P++GT+   ++ +       ++ 
Sbjct: 295 FKSDLLEKLQQNRQRDKQLTLELEKNEQRQLASIIRAPVSGTVQQLKTHTKGGVVTTAET 354

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM I P   +  + A +  K I  V+ G    ++   +   R       ++ +     + 
Sbjct: 355 LMVIAPEEDVLEVSALIQNKDIGFVEIGQGVVIKVETFPYTRYGYLYGKVKTVTLDAIE- 413

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELR--NGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             + Q    +  I++I     +D + E++  +G            ++   ++ P+ ++  
Sbjct: 414 --HPQLGLVFNSIIEINKKTLADGDKEIQLGSGMNVIAEIKTGERSVISFLLSPLEESIT 471


>gi|238764501|ref|ZP_04625449.1| HlyD family secretion protein [Yersinia kristensenii ATCC 33638]
 gi|238697313|gb|EEP90082.1| HlyD family secretion protein [Yersinia kristensenii ATCC 33638]
          Length = 289

 Score =  217 bits (552), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 104/290 (35%), Gaps = 5/290 (1%)

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             ++F++   +    +     ++         L+      +   +  Q+ L  ++ L + 
Sbjct: 2   QQQLFHHRRQAQLSEIARLSAQITRHESQLDGLQTLRGHNQQQFNLFQQQLQGVQLLAKN 61

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             VSQ+ L + ER        + +N  E   + + I E           Y  E    L +
Sbjct: 62  GHVSQSQLLEMERQAISLRANIEKNTSEILELHKQIGETEQHILQRREQYKSENREQLAK 121

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            Q++  +   +L + E   +   I +P+ GT++     +        Q LM++VP  +  
Sbjct: 122 AQQSTQELELRLGVAEYELDNTRIYAPVNGTVIALAQHTVGGVVSTGQTLMELVPSGQPL 181

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
              A++    I  V  G    + F  +      + +  +  +     Q  + L  + YY 
Sbjct: 182 LAEAQLPVSLIDKVVIGLPVDLNFSAFNQSNTPRLQGSVLHVGADRIQ--HPLTLEPYYP 239

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           + + I     +   +E+R G   ++       +L   +  P+TD     F
Sbjct: 240 LTVAID---ITQTELEIRPGMSVDIFIRTGERSLLNYLFKPLTDRLHVAF 286


>gi|303250763|ref|ZP_07336958.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302650368|gb|EFL80529.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 478

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 68/429 (15%), Positives = 159/429 (37%), Gaps = 25/429 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   +  SI+  +EI  +++G++       EIK   + ++K+  V++G  
Sbjct: 58  RLIAYLIMLFLFLALVISIVSHVEIVATATGKLAFSGRSKEIKPIENALVKEIFVQDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +   LL    +         K S+   +               +Y++L +A  +    
Sbjct: 118 VEKDQLLLHLTALGADADQQKTKSSLSLTKLE-----------RYRYEILLEAVAADRLP 166

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKSSL-----LR 189
           L++         ++     I  +         K    + + L R + E ++ L       
Sbjct: 167 LIELTKDEFKHATEEDKTRIRYLITEQFEAWQKQKYQKELALQRREAEKQTVLANIRKYE 226

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            +     + L  +K LF   + S++D+  QE    ++  EL         +   + +  +
Sbjct: 227 GISRVENERLKDLKKLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKE 286

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +L    +  +I   L+QN         +L   E+ +    I +P++GT+   ++ +  
Sbjct: 287 EIHLITQLFRADILEKLKQNVEAEKQLSLELEKNEQRQIASVIRAPVSGTVQQLKTHTVG 346

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                ++ LM I P   +  + A +  K I  ++ G  A ++   +   R       ++ 
Sbjct: 347 GVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPYTRYGYLMGKVKN 406

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
           I     +   + Q    +  I+ I     S  +   IEL +G            ++   +
Sbjct: 407 I---TLEAIEHPQLGLVFNSIISIDRKTLSGKDGKEIELGSGMSVTAEIKTGERSVISYL 463

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 464 LSPLEESIS 472


>gi|253995850|ref|YP_003047914.1| HlyD family type I secretion membrane fusion protein [Methylotenera
           mobilis JLW8]
 gi|253982529|gb|ACT47387.1| type I secretion membrane fusion protein, HlyD family
           [Methylotenera mobilis JLW8]
          Length = 476

 Score =  216 bits (549), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 49/422 (11%), Positives = 143/422 (33%), Gaps = 30/422 (7%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
            W+I   +++   + G+++    +  ++   +GI++   ++ G  + +G  L+  +   +
Sbjct: 64  IWAIFGRLDVVSVAEGKLVPVSYIKIVQPSEAGIVRDIAIKEGQAVTKGQVLIQMDANLS 123

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                  + S+++    +   ++ L     K    + +      +L + +   + +  + 
Sbjct: 124 EADSKALQSSLQHRSLELRRIEAELANKPLKKKSNDDS------ELFNRIYASYQSNRRA 177

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   I++   SL       +  Y +    +     L   L S+Q        L +     
Sbjct: 178 YEDDIAAEKASL-------QKAYSDLSATQEIQYKLEQTLPSYQAQEAAYAKLVKDGFAG 230

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +    +++R    +  +LR   +  K++   I +     N   ++Y +++  +       
Sbjct: 231 KLMGQEKQRERITAEQDLRAQEYNAKSLQASIAQSQKRLNQIQSDYHQKLETERVATYAE 290

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           +     +            + +P AG +    + +          LM +VP+++      
Sbjct: 291 YLRLEQEWAKQSHKNSLLELKAPQAGIVKDLATHTPGTVVSPGTVLMTLVPNNEALQAEV 350

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP---------------IISQQ 377
            +  +    V++     V+   Y   +       + ++                   +Q 
Sbjct: 351 WLKNEDAGFVRQNQQVKVKLSAYPFQKYGMVDGKVLQVSADATDKSASNNSQSGTDSTQS 410

Query: 378 DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
            +   TQ  Y  I+++    L    + + L  G          + T+ + ++ PI   + 
Sbjct: 411 SSGATTQLAYRTIIQLNKQSLEIEQDKLRLAPGMQVVAEIKLVDQTVMEYLLSPIRKAFH 470

Query: 436 KI 437
           + 
Sbjct: 471 EA 472


>gi|46143510|ref|ZP_00135088.2| COG0845: Membrane-fusion protein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208906|ref|YP_001054131.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           L20]
 gi|190150717|ref|YP_001969242.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303252429|ref|ZP_07338594.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|126097698|gb|ABN74526.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|189915848|gb|ACE62100.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302648702|gb|EFL78893.1| RTX-I toxin secretion component [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 478

 Score =  215 bits (548), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 68/429 (15%), Positives = 159/429 (37%), Gaps = 25/429 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   +  SI+  +EI  +++G++       EIK   + ++K+  V++G  
Sbjct: 58  RLIAYLIMLFLFLALVISIVSHVEIVATATGKLAFSGRSKEIKPIENALVKEIFVQDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +   LL    +         K S+   +               +Y++L +A  +    
Sbjct: 118 VEKDQLLLHLTALGADADQQKTKSSLSLTKLE-----------RYRYEILLEAVAADRLP 166

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKSSL-----LR 189
           L++         ++     I  +         K    + + L R + E ++ L       
Sbjct: 167 LIELTKDEFKHATEEDKTRIRYLITEQFEAWQKQKYQKELALQRREAEKQTVLANIRKYE 226

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            +     + L  +K LF   + S++D+  QE    ++  EL         +   + +  +
Sbjct: 227 GISRVENERLKDLKKLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKE 286

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +L    +  +I   L+QN         +L   E+ +    I +P++GT+   ++ +  
Sbjct: 287 EIHLITQLFRADILEKLKQNVEAEKQLSLELEKNEQRQIASVIRAPVSGTVQQLKTHTVG 346

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                ++ LM I P   +  + A +  K I  ++ G  A ++   +   R       ++ 
Sbjct: 347 GVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPYTRYGYLMGKVKN 406

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
           I     +   + Q    +  I+ I     S  +   IEL +G            ++   +
Sbjct: 407 I---TLEAIEHPQLGLVFNSIISIDRKTLSGKDGKEIELGSGMSVTAEIKTGERSVISYL 463

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 464 LSPLEESVS 472


>gi|150396106|ref|YP_001326573.1| HlyD family type I secretion membrane fusion protein [Sinorhizobium
           medicae WSM419]
 gi|150027621|gb|ABR59738.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium medicae WSM419]
          Length = 491

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 74/455 (16%), Positives = 152/455 (33%), Gaps = 28/455 (6%)

Query: 4   FMWKNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                +    P+ ++  +  L      G + WS +   +I  +S G+I     V  I+S 
Sbjct: 26  PAALEILETPPSPIRASLIWLLCALAAGALLWSWIGTFDIVATSQGKIQPLGRVKVIQSL 85

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +   +   V NG ++  G  L+  +D E     D+  + +  LR  I     AL   + 
Sbjct: 86  ETSKTRSVPVANGQEVKAGDLLVDLDDTELRADADMLSIGLAALRADISRRDHALVLASE 145

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR---- 178
                E     +    + F         +     + +    L   L R+R+    +    
Sbjct: 146 LGIDAEATSSRKPAAEIVFPSGIPPQIRRREQAVLEADISELVSLLDRIRAQKRQKEAEV 205

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             L +  +  R L+++  + ++M  +LF   + S+ ++     I  ++  EL E + +  
Sbjct: 206 ARLSSTINAQRTLVATLGERVSMRTSLFNSQSGSKAEVINAAEISQRAEAELAERVGQMA 265

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +  L  E       ++ E +R      R   ++  +L  +        I SPI G
Sbjct: 266 EAETGLQVLVAERTSAIRAFIAENARQRADVARRADEQEQQLRKITARLGSMKIHSPIDG 325

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T+      +          LM++VP      I A +  K I  V  G  A ++   +   
Sbjct: 326 TVQATAITTIGQIVSSGTELMRVVPLVGPIEIEAYLPNKDIGFVSAGMAAVIKIEAFPFT 385

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQE---------------------YYEVILKITDLA 397
           R    +  + ++      + +  Q +                       + V ++     
Sbjct: 386 RFGVVEGKVVQVATDAIPEPDAQQIEGAAAKEIESLIPIGNVQRMQNLVFPVTVRPNRTT 445

Query: 398 FSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            + N   + L+ G    V        + + +  PI
Sbjct: 446 ITVNGRVMPLKPGMAVTVEIKTGRRRILEYLFSPI 480


>gi|75907412|ref|YP_321708.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75701137|gb|ABA20813.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 523

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 88/477 (18%), Positives = 190/477 (39%), Gaps = 48/477 (10%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIK 60
           + F    + R  P    R  +L++IG+  + I W+    IE  V ++G++  E  V E++
Sbjct: 42  NDFEQSVVLRQSPL-WSRTIMLTLIGLACVGIGWAYFAKIEQVVPATGQLKPEGTVKEVQ 100

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P +G++++  V+NG  + +G  LLTF+ + T   ++  +   + L     T +  +   
Sbjct: 101 APVNGVVREVFVKNGETVNKGDLLLTFDQVTTVAQLNSLEKVRRALTQENQTYRRLMRST 160

Query: 121 NNKYDVLE--KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                 LE  ++   +E   L          +++    +++    + +     + + + +
Sbjct: 161 GGIASELEFVRSRLPQEAAFLLRNRAALVAENELLRTQLNNATTGIGLDSDEQKQLKVAK 220

Query: 179 LDLENKSSLL---------------------RALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            +LE++++                       ++ L+  Q+ L  +K L E+  +SQ    
Sbjct: 221 TELESRAAAAGLEVSKIERQLTQTTVKLQDTQSSLAIQQQILDKIKILAEEGGISQLQYL 280

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHIN------------------ELYDEANLEFANYL 259
            Q++ V  +  E+ + + EQK +   I                   E   +     A   
Sbjct: 281 NQQQQVQTTAAEVAQLVEEQKRLQFDIEKNQQQVTNTVATTDKNILEKIADNKKRIAEID 340

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            +  R +  N+R  AD  S+++  ++  + + + +P+AGT+   ++ ++   A  +Q L+
Sbjct: 341 SQFMRIVLDNERNLADITSRISQAQQELKYQELRAPVAGTVFDLKANNTGFVANPTQKLL 400

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +IVP ++       +T K I  V+KG    VR   +   +    K  I  I       D 
Sbjct: 401 QIVP-NENFIAEVFITNKDIGFVRKGMKVDVRIDSFPFSQFGDIKGAIIDIGSDALPPDE 459

Query: 380 NLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTA-KNTTLAQEIIHPITDN 433
             +   +    +K+    L   D  I L++G          +  T+        T+ 
Sbjct: 460 IYKFYRF-PARIKLNQQYLQIQDKQISLQSGMSISANIKVREERTVMSLFTEMFTNQ 515


>gi|113953775|ref|YP_730425.1| HlyD family secretion protein [Synechococcus sp. CC9311]
 gi|113881126|gb|ABI46084.1| HlyD family secretion protein domain protein [Synechococcus sp.
           CC9311]
          Length = 511

 Score =  215 bits (548), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 64/423 (15%), Positives = 138/423 (32%), Gaps = 24/423 (5%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++R   +     +    W+ L PI   + +SGE++ + +V  I+    GI+    V+NG 
Sbjct: 108 VRRSLYVLGAAALIFFPWAALTPITQVIEASGEVIPQGSVNIIQHLEGGIVSSVNVKNGQ 167

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  LL              K  +  L    +  ++A+       DVL         
Sbjct: 168 SVSKGEALLQLNPQMVGSEFSATKSKLDALIIQQEQLRAAI----RGDDVLPS------- 216

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              + +   + +  KV +   + +   L     +++S      +   + + L   L    
Sbjct: 217 --QNNIDVLNPSEIKVSDAQQNLLTSRLANASDQLKSASAVVAEKSAEINGLNKQLKLLI 274

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++  M  +L +  A S+  L   +  V     E+R   +E    L               
Sbjct: 275 EERDMWASLTQDGASSRLQLVNAQAKVE----EIRGARNEATKALAQAKANLQSLQSGLV 330

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                    L   +   A+ + K+        +  + +P++GT+   +  +         
Sbjct: 331 LEQNSEIAALVNEESVVAENIKKVR---FQLSRMVVKAPVSGTVSDLRFSARGAVVAPGA 387

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +  +VP      + A++  + I  V  G    V    +           +  I     Q
Sbjct: 388 VVASVVPAGTTKLVEARIPSQDIGFVHIGQDVDVNLQPFDSSVYGTIPGRLTSISGDTVQ 447

Query: 377 QDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
             ++   Q YY   +++       S+    ++ G P       + + + Q + HP     
Sbjct: 448 NPDDR--QFYYNATIELDRQYLDSSNKKYPVQVGMPIVADIKGQRSNVLQYLFHPFVRTL 505

Query: 435 PKI 437
              
Sbjct: 506 NGA 508


>gi|110677972|ref|YP_680979.1| HlyD family secretion protein [Roseobacter denitrificans OCh 114]
 gi|109454088|gb|ABG30293.1| putative HlyD family secretion protein [Roseobacter denitrificans
           OCh 114]
          Length = 453

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 66/427 (15%), Positives = 156/427 (36%), Gaps = 24/427 (5%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             + +    ++ +     WS + P+   V+  G I  E     I+    GI+ +  V++G
Sbjct: 42  YARSVIWTVVLALAAFFYWSSVTPVYEVVTGEGTIKPEGLSTRIEHLEGGIVNEIAVQDG 101

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  +L  +       +   +  +  ++  I+  ++         D  E    +  
Sbjct: 102 DIVQPGQLILQLDTQIVQSELAKIETLLTQVQESIERYETISAISFGTLDDTELRQMTSV 161

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             + D   +            I ++     +  T  ++I+ N   L  + ++ +A L  +
Sbjct: 162 SIISDINYRL---------AQIQTIRSQKSVASTEQQAIHANIESLRQELAIQQAQLDRY 212

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+            +VS N   + +R   +    + +   E + +   I +L        
Sbjct: 213 QRAGF-------NGSVSLNRREELQRENLRLESSIAQLSGEVRILDARIEQLGSSEREMI 265

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A + ++ +  L++ +   A  +     L+   ++  I+SP+AG +      +     Q  
Sbjct: 266 AQFRRDAALQLDEKRTELAGLLETRAALDFQIQRSRIVSPVAGMVNAISVQNLGEVVQPG 325

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + +++I+P +  T+   ++   +I  V  G TA+V+   Y   R     A++E I P   
Sbjct: 326 EVIVEIIPSTGETFAEIEIAADRIGGVTTGSTASVKVLTYDFTRYGSLDAVVEHISPSSF 385

Query: 376 QQDNNLQTQEYYEVI-----LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            ++N    Q  + V      L I  +    +   +  G        ++  T+   ++ P+
Sbjct: 386 TKEN---GQTVFRVRLGFRSLTIASVGQMPDGRRVTPGMTVVADIKSEGRTILSFLLKPL 442

Query: 431 TDNWPKI 437
                + 
Sbjct: 443 RVISDRA 449


>gi|209552244|ref|YP_002284159.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209539356|gb|ACI59288.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 480

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 57/440 (12%), Positives = 143/440 (32%), Gaps = 24/440 (5%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L+   P  + RMTL  +   +   ITW+ +  I+  V + G+++     + ++   + I
Sbjct: 51  ELEERAPPRVARMTLYCVTALLAAAITWASVSSIDEVVIAPGKLVTTQPTIVVQPLETSI 110

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+  +V+ G  +  G  L T +   +   +D ++     L   +   ++ L   +     
Sbjct: 111 IRTIEVKAGEVVHTGQTLATLDATFSQADVDQQQAKFSALDAQVRRIEAELAGNDYTKMA 170

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +   +  + QL      ++    + F+  I+    +L                 +N+ +
Sbjct: 171 GDTPDQMLQAQLFGQRRAFYVAQLQNFDQQIAGQSAALVAS--------------KNQEA 216

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           +L        +     + L++  + S   L            +L               +
Sbjct: 217 VLNDRRDGLSQIEAARERLYDNQSGSLITLLGSRDARLDVESDLTAVRGRADEAAHSYAK 276

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +      ++ +     L + +        +L  ++  R    + +P    ++     
Sbjct: 277 LRADRQAFIEDFRRAAMEQLVELRGQRDMADEELKKMKLRRNMVALTAPADAIVLDLAQR 336

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S  +  ++++P++ +VP +        +  + I  V  G  A V+   Y   +       
Sbjct: 337 SVGSVVREAEPVVTLVPINVPLEAEVSINTRDIGRVAVGKDARVKLDAYPFQKYGTATGE 396

Query: 367 IEKIDPIISQQDNNLQT-------QEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTA 417
           +  I           QT         +++  + + D     +D  + L  G         
Sbjct: 397 VRTISQDTFVTGQQEQTATPSQPAAPFFKARILLADTRLNAADMPVRLLPGMTVSTEIKV 456

Query: 418 KNTTLAQEIIHPITDNWPKI 437
              T+    ++P+       
Sbjct: 457 GKRTVISYFLYPLLRGLDNA 476


>gi|260460270|ref|ZP_05808522.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium opportunistum WSM2075]
 gi|259033915|gb|EEW35174.1| type I secretion membrane fusion protein, HlyD family
           [Mesorhizobium opportunistum WSM2075]
          Length = 481

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 58/445 (13%), Positives = 139/445 (31%), Gaps = 19/445 (4%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+     + +  + L ++  +G + WS    I+   +  G+++    V  I+   +G ++
Sbjct: 38  LETPASPAARIFSALIMLFAVGALAWSWFGRIDTYATIQGKLIPIGKVQVIEPLITGTVR 97

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V+ G  +  G  L+  +  E          ++          ++ +D + +     E
Sbjct: 98  ALHVKAGDHVAAGDALVELDPSEYQAERQKNAGNLAAAEVSKARLQALIDAVADDTPATE 157

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF   E      +        +       S   SL+ ++ + R   +            
Sbjct: 158 AAFVVPENAPAPLVDLQRLQMRQSL-AAYQSEQDSLEAEIAQKR---IEIERAGKTLVER 213

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R L+      L +   L ++    +    +  +      +    +      +   +  L 
Sbjct: 214 RKLVQLAGDRLDVYVALEKRQVGIKTSTIEARQGEQDQLMATVSDEGHIAELEATVKTLA 273

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +       YL +++ +L +  R        L   E       + SP+AG +   +  + 
Sbjct: 274 AQKRARRDAYLDKVATELIEIDRMIGVSRQDLAKAELFERASLLRSPVAGRVQQLEVNTL 333

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q  Q LM +VP      I A +  +    V +G    V+   +   R       + 
Sbjct: 334 GEVVQTGQKLMVVVPDGTKLEIEAMLLNRDKGFVHEGQDVRVKLEAFPFTRYGTLDGKVL 393

Query: 369 KIDPII-------------SQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEV 413
            +                  +   +      + V + + + +F     ++ L  G     
Sbjct: 394 TVSNDAIPAGSPQEPLAAKEETARDSAGPLVFPVRIALNETSFRVEGRDVVLTPGMSVTA 453

Query: 414 LFTAKNTTLAQEIIHPITDNWPKIF 438
                N  + + ++ P+ +   + F
Sbjct: 454 EVKTGNRRVLEFLLDPLMEMTDEAF 478


>gi|307253041|ref|ZP_07534926.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306859499|gb|EFM91527.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 473

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 68/429 (15%), Positives = 159/429 (37%), Gaps = 25/429 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   +  SI+  +EI  +++G++       EIK   + ++K+  V++G  
Sbjct: 53  RLIAYLIMLFLFLALVISIVSHVEIVATATGKLAFSGRSKEIKPIENALVKEIFVQDGQF 112

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +   LL    +         K S+   +               +Y++L +A  +    
Sbjct: 113 VEKDQLLLHLTALGADADQQKTKSSLSLTKLE-----------RYRYEILLEAVAADRLP 161

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKSSL-----LR 189
           L++         ++     I  +         K    + + L R + E ++ L       
Sbjct: 162 LIELTKDEFKHATEEDKTRIRYLITEQFEAWQKQKYQKELALQRREAEKQTVLANIRKYE 221

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            +     + L  +K LF   + S++D+  QE    ++  EL         +   + +  +
Sbjct: 222 GISRVENERLKDLKKLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKE 281

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +L    +  +I   L+QN         +L   E+ +    I +P++GT+   ++ +  
Sbjct: 282 EIHLITQLFRADILEKLKQNVEAEKQLSLELEKNEQRQIASVIRAPVSGTVQQLKTHTVG 341

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                ++ LM I P   +  + A +  K I  ++ G  A ++   +   R       ++ 
Sbjct: 342 GVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPYTRYGYLMGKVKN 401

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
           I     +   + Q    +  I+ I     S  +   IEL +G            ++   +
Sbjct: 402 I---TLEAIEHPQLGLVFNSIISIDRKTLSGKDGKEIELGSGMSVTAEIKTGERSVISYL 458

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 459 LSPLEESIS 467


>gi|328724897|ref|XP_003248282.1| PREDICTED: hypothetical protein LOC100569049 [Acyrthosiphon pisum]
          Length = 1282

 Score =  214 bits (546), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 48/368 (13%), Positives = 110/368 (29%), Gaps = 57/368 (15%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             ++  G  +   +   +   +       +     +         +N+         ++  
Sbjct: 969  DRVKAGQVVARLDATRSQSSVGESAARYRAA---LAAASRLRAEVNDDPLTFPNELKAYP 1025

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            + +                              +  R     R  L + +   +  L+  
Sbjct: 1026 DLIA-----------------------------SETRLYKTKRAQLNDSTKQFKESLALA 1056

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             K+L + + L +  A S  ++ + +R      L+L +   +                   
Sbjct: 1057 NKELAITQRLAKTGAASSVEVLRLQRDKSDLELKLTDMRSQ------------------- 1097

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              Y  +   +L +           +   E T  + TI +P+ G +   +  +       +
Sbjct: 1098 --YYVQAREELAKASAEADSLAEVIKGREDTVTRLTIRAPMNGIVKNIKVSTVGGVIPPN 1155

Query: 316  QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
              LM IVP +    I A+++P+ I  +  G  A V+   Y          ++E I P   
Sbjct: 1156 GELMNIVPLNDRLLIEARLSPRDIAFIHPGQRAVVKISAYDYAIYGGMNGVVESISPDTI 1215

Query: 376  QQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            Q +   +   YY V ++  +      +     +  G  + V       T+   ++ P   
Sbjct: 1216 QDEVKPEI-YYYRVFIRTDNDYVQNKAGKRFSISPGMVSTVDIKTGKKTIMDYLVKPFNK 1274

Query: 433  NWPKIFER 440
                + ER
Sbjct: 1275 AKEAMRER 1282


>gi|307246320|ref|ZP_07528399.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307248433|ref|ZP_07530454.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307250713|ref|ZP_07532648.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307255304|ref|ZP_07537117.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307257467|ref|ZP_07539234.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307259739|ref|ZP_07541460.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307261887|ref|ZP_07543549.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307264069|ref|ZP_07545667.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|306852790|gb|EFM85016.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306855075|gb|EFM87257.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306857251|gb|EFM89372.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306861753|gb|EFM93734.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306864047|gb|EFM95963.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306866207|gb|EFM98074.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306868434|gb|EFN00249.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306870615|gb|EFN02361.1| RTX-III toxin determinant D [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 473

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 68/429 (15%), Positives = 159/429 (37%), Gaps = 25/429 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   +  SI+  +EI  +++G++       EIK   + ++K+  V++G  
Sbjct: 53  RLIAYLIMLFLFLALVISIVSHVEIVATATGKLAFSGRSKEIKPIENALVKEIFVQDGQF 112

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +   LL    +         K S+   +               +Y++L +A  +    
Sbjct: 113 VEKDQLLLHLTALGADADQQKTKSSLSLTKLE-----------RYRYEILLEAVAADRLP 161

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKSSL-----LR 189
           L++         ++     I  +         K    + + L R + E ++ L       
Sbjct: 162 LIELTKDEFKHATEEDKTRIRYLITEQFEAWQKQKYQKELALQRREAEKQTVLANIRKYE 221

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            +     + L  +K LF   + S++D+  QE    ++  EL         +   + +  +
Sbjct: 222 GISRVENERLKDLKKLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKE 281

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +L    +  +I   L+QN         +L   E+ +    I +P++GT+   ++ +  
Sbjct: 282 EIHLITQLFRADILEKLKQNVEAEKQLSLELEKNEQRQIASVIRAPVSGTVQQLKTHTVG 341

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                ++ LM I P   +  + A +  K I  ++ G  A ++   +   R       ++ 
Sbjct: 342 GVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPYTRYGYLMGKVKN 401

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
           I     +   + Q    +  I+ I     S  +   IEL +G            ++   +
Sbjct: 402 I---TLEAIEHPQLGLVFNSIISIDRKTLSGKDGKEIELGSGMSVTAEIKTGERSVISYL 458

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 459 LSPLEESVS 467


>gi|327189849|gb|EGE56984.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CNPAF512]
          Length = 480

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 62/440 (14%), Positives = 140/440 (31%), Gaps = 24/440 (5%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L+   P  + RMTL  +  +I   I W+ +  I+  V + G+++     + ++   + I
Sbjct: 51  ELEERAPPRVARMTLYCVTALIASAIIWASVSSIDEVVIAPGKLVTTQPTIVVQPLETSI 110

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+   V+ G  +  G  L T +   +   +   K     L   +   ++ L   +     
Sbjct: 111 IRTIDVKAGQVVHAGQTLATLDATFSQADVGQLKTKFSALDAQVKRLETELTGEDYSKVA 170

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                E  + QL      +++   K F   I+     L     +   +   R +L    S
Sbjct: 171 GNTPDEQLQVQLFGQRRAFYTAQLKNFEQQIAGQSSVLAANRNQEAVLNDRRDNL----S 226

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           L+ A            K L++  + S   +            ++     +         +
Sbjct: 227 LIEATR----------KKLYDTESGSLLTMLGSRDARLDVEADITAVRGKADEAAHTYAK 276

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +      ++ +     L   +        +L  LE  R    + +P    ++     
Sbjct: 277 LLADRQAFIEDFRRAAMEQLADLRSQRDMAGEELKKLELRRNMVALTAPADAVVLDLAQR 336

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S  +  ++++P++ +VP +        +  + I  V  G  A ++   Y   +       
Sbjct: 337 SVGSVVREAEPVVTLVPINVPLEAEVSINTRDIGRVAVGKEARIKLDAYPFQKYGTASGE 396

Query: 367 IEKIDPIIS-------QQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTA 417
           +  I                      +++  + + D  L  +D  + L  G         
Sbjct: 397 VRTISQDTFLTGQQEQTATPGQPAAPFFKARILLADTRLNVADVPVRLLPGMTVSTEIKV 456

Query: 418 KNTTLAQEIIHPITDNWPKI 437
            N T+    ++P+       
Sbjct: 457 GNRTVISYFLYPLLRGLDNA 476


>gi|300312188|ref|YP_003776280.1| hemolysin secretion-related transmembrane protein [Herbaspirillum
           seropedicae SmR1]
 gi|300074973|gb|ADJ64372.1| hemolysin secretion-related transmembrane protein [Herbaspirillum
           seropedicae SmR1]
          Length = 447

 Score =  214 bits (545), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 69/418 (16%), Positives = 149/418 (35%), Gaps = 40/418 (9%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            SL+    L +  +I  + WS+L  I+I VS++G+++       I S     ++   V  
Sbjct: 57  RSLRWTARLLVGMVIFALLWSLLGRIDIVVSANGKVIPSARTKTIASVDVSAVRAILVSE 116

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G  L+  +   +                  D E+        +  +     ++ 
Sbjct: 117 GQLVKAGEVLIELDSSSS------------------DAERDKAADAVAQARLQAARAQAM 158

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            E + +      +    V      +V   L  +    R+       L+++ S   A L  
Sbjct: 159 MEAIQNLRTPELAQVPGVAQAQWEAVRSQLVAQYQDFRARLGR---LDDEISRYGAALKL 215

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             +  +  + L   + VS++   ++E+       +L +  +++  ++    +   ++ +E
Sbjct: 216 ATQRASDYQTLVADHTVSRHAWLEKEQARVDLQGQLDDARNQRATLVAQTRKDAHDSRIE 275

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                 + + +  Q  +  ADE SKL  L         ++P+ GT+      +       
Sbjct: 276 -----ADKTIEASQQDQRRADEHSKLLKL---------VAPVTGTVQQLTVHTIGGVVPA 321

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           +QPLM+IVP      + A +  K +  V+ G  A V+   +   +     A +  I    
Sbjct: 322 AQPLMQIVPQDSQIEVEAMLENKDVGFVEIGQAAEVKIDAFDYTKYGTLPARVVHISRDA 381

Query: 375 SQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            Q +        Y   + +   +       ++L  G  A V     N  + +  + P+
Sbjct: 382 IQDEKKGLL---YSARIVLDQSSLIVDGRKVQLSAGMAANVEIKTGNRRVIEYALSPL 436


>gi|38945|emb|CAA43426.1| ClyI-D protein [Actinobacillus pleuropneumoniae]
 gi|505572|emb|CAA48588.1| secretion protein D [Actinobacillus pleuropneumoniae]
          Length = 478

 Score =  214 bits (544), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 69/429 (16%), Positives = 160/429 (37%), Gaps = 25/429 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   +  SI+  +EI  +++G++   D   EIK   + ++K+  V++G  
Sbjct: 58  RLIAYLIMLFLFLALVISIVSHVEIVATATGKLAFSDRSKEIKPIENALVKEIFVQDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +   LL    +         K S+   +               +Y++L +A  +    
Sbjct: 118 VEKDQLLLHLTALGADADQQKTKSSLSLTKLE-----------RYRYEILLEAVAADRLP 166

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKSSL-----LR 189
           L++         ++     I  +         K    + + L R + E ++ L       
Sbjct: 167 LIELTKDEFKHATEEDKTRIRYLITEQFEAWQKQKYQKELALQRREAEKQTVLANIRKYE 226

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            +     + L  +K LF   + S++D+  QE    ++  EL         +   + +  +
Sbjct: 227 GISRVENERLKDLKKLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKE 286

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +L    +  +I   L+QN         +L   E+ +    I +P++GT+   ++ +  
Sbjct: 287 EIHLITQLFRADILEKLKQNVEAEKQLSLELEKNEQRQIASVIRAPVSGTVQQLKTHTVG 346

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                ++ LM I P   +  + A +  K I  ++ G  A ++   +   R       ++ 
Sbjct: 347 GVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPYTRYGYLMGKVKN 406

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
           I     +   + Q    +  I+ I     S  +   IEL +G            ++   +
Sbjct: 407 I---TLEAIEHPQLGLVFNSIISIDRKTLSGKDGKEIELGSGMSVTAEIKTGERSVISYL 463

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 464 LSPLEESVS 472


>gi|329113580|ref|ZP_08242360.1| RTX-III toxin determinant D [Acetobacter pomorum DM001]
 gi|326697102|gb|EGE48763.1| RTX-III toxin determinant D [Acetobacter pomorum DM001]
          Length = 487

 Score =  213 bits (543), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 67/439 (15%), Positives = 151/439 (34%), Gaps = 29/439 (6%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H     L    P    +  +  I G++   +    + P++  VS+ G +++ +  + I+ 
Sbjct: 50  HSPTAALVNMPPTPTAQYMIWIIGGLMLFSLIGLTVFPLDRVVSTQGRLVSSEASLVIQP 109

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + I++   V  G  + +G  L   +  +T    +  K  +   +  +D   +  +   
Sbjct: 110 LDTSIVRSIDVREGDFVHKGDILAHLDPTQTGADSENLKTQMDQYQAEVDRLTAEANGQT 169

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            K D+   A   + E  L  + ++ +   + +N  I+S+   L+  +    ++Y  R  +
Sbjct: 170 YKPDLNNAATLPQGEAYLRRMAEFDAKV-ENYNRQIASLQSDLQGYVANA-AMYAARAKV 227

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                 +R  L   QKD    +        +QNDL + ER    +         +  +  
Sbjct: 228 AGDVHTMRMQL---QKDQVGSRL---STLSAQNDLMEVERSQISAQQ-------QASSTR 274

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             +     E       +  EI +DL   Q   ++                + +     ++
Sbjct: 275 NKLAAAISEKEGYIQTWKAEIYKDLISAQHKLSEAKGSYQKAVLHNSMVGLKADEDAVVL 334

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                S  +    ++ +M +VP  K   I   ++ +    V+ G  A V+F  +   +  
Sbjct: 335 NIAKVSVGSVVTPAEKIMTLVPVGKGLEIETAMSGEDAGFVRLGDKALVKFATFPFQQYG 394

Query: 362 KFKAIIEKIDPIIS-----------QQDNNLQTQEYYEVILKITDLAFS--DNNIELRNG 408
             +A ++ I                    +  ++ +Y V L++         N    + G
Sbjct: 395 GAEATVKTISADSFVSGNGSGPSSEDVTPDNTSKSFYRVRLRVDKYTLHNVPNFFHPQPG 454

Query: 409 FPAEVLFTAKNTTLAQEII 427
            P          T+ Q ++
Sbjct: 455 MPVTADIRVGKRTIMQYML 473


>gi|190895163|ref|YP_001985456.1| putative HlyD family protein secretion protein [Rhizobium etli CIAT
           652]
 gi|190700824|gb|ACE94906.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CIAT 652]
          Length = 481

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 64/431 (14%), Positives = 138/431 (32%), Gaps = 26/431 (6%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            +TW+ +  I+I  ++ G+I     V  ++  + G +      +G+++ +G  L   +  
Sbjct: 53  ALTWAYVGRIDIIATAQGKIQPVGRVKVVQPLYGGKVVVLPPPDGTEVHRGEVLFQLDPT 112

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E        +   +     +  E              E    +R     D   K      
Sbjct: 113 EAIAD----EKDAEAALSSVQAEAMRRRAALAAATATEVNRSARINWAADVPEKLRKRED 168

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +    +  +  SL    +++R     R  L++      +L+ + Q+ + M   L  +NA
Sbjct: 169 AILASELGQLDASLTSLRSQVRQKEGERDHLQDTLDEQASLVDTLQQRVAMRSTLVGENA 228

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +      +     +      +  + +  I+ L  E     + ++ + +  L   +
Sbjct: 229 GPVASVIDATETLKTQRTQFAIQKGQLADAVAGIDVLKAEIEKTRSTFISDQTERLGDAE 288

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           R   D   +L        Q T+ SPI G +  +   +        + ++++VP      +
Sbjct: 289 RQAEDLEERLAKTRAELAQMTVRSPIDGVVQTSVISTEGQVVTAGEEVLRVVPAGAELEL 348

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE----- 385
              V  + I  +  G  A V+   +   R     A I KI      + +  + +E     
Sbjct: 349 EVYVPNRDIGFIHVGQPAVVKLDAFPFTRYGTVPATITKIATDAIPEPDAERREEDAAAA 408

Query: 386 ---------------YYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIH 428
                           + V LK+   A   N   I L  G  A          +   +  
Sbjct: 409 PQTSLFAGAERIQNLVFAVTLKLEQNAVRANGADIPLSPGMSATAEMRTGTRRILGYVFS 468

Query: 429 PITDNWPKIFE 439
           P+ +      +
Sbjct: 469 PLVEVASDAMK 479


>gi|330881232|gb|EGH15381.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 285

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 94/283 (33%), Gaps = 3/283 (1%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
              ++ R        +    L    +    S L A   S +K L+ ++ L +   +  N 
Sbjct: 1   RRQALAREQSGLQASIEGAGLQLAGMRRARSDLLAQADSLRKQLSNLEPLAQNGFIPGNR 60

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L + +  + +    L +N  E   + + I E       +   Y KE+       Q     
Sbjct: 61  LLEFQSQLSQVQQSLAQNAGETGRIEQGIVESRLRLQQQREEYQKEVRSQWADAQVKALT 120

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +L     +     IL+P  G  V     +     +  + L++IVP      ++ ++ 
Sbjct: 121 LEQQLASAGFSLLHSAILAPADGIAVNLGVHTEGAVVRAGETLLEIVPQGTRLEVKGRLP 180

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            + I  V       + F  +   R  +    +  I     Q +     Q YY +   + D
Sbjct: 181 VQLIDKVASHLPVDILFTAFNQSRTPRVSGEVNLISADQMQDEKT--GQPYYVLRTSVGD 238

Query: 396 LAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
                 N + ++ G PAE+       +L   +  P+ D     
Sbjct: 239 AVLEKLNGLVIKPGMPAEMFVRTGERSLLNYLFKPLLDRAGSA 281


>gi|258543500|ref|YP_003188933.1| multidrug ABC transporter [Acetobacter pasteurianus IFO 3283-01]
 gi|256634578|dbj|BAI00554.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256637634|dbj|BAI03603.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256640688|dbj|BAI06650.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256643743|dbj|BAI09698.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256646798|dbj|BAI12746.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256649851|dbj|BAI15792.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256652841|dbj|BAI18775.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256655895|dbj|BAI21822.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 487

 Score =  213 bits (542), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 68/439 (15%), Positives = 155/439 (35%), Gaps = 29/439 (6%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H     L    P    +  +  I G++   +    + P++  VS+ G +++ +  + I+ 
Sbjct: 50  HSPTAALVNMPPTPSAQYIIWVIGGLVLFSMIGITVFPLDRVVSTEGRLVSSEPSLVIQP 109

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + II+   V  G  + +G  L   +  +T    +  K  +   +  +D   +  +  +
Sbjct: 110 LDTSIIRSINVREGDFVHKGDVLTYLDPTQTGADSENLKTQMDQYQAEVDRLTAEANGQD 169

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            K DV   +   + E  L  + ++++   + +N  I+S+   L+  +    ++Y  R  +
Sbjct: 170 YKPDVNNLSALPQGEAYLRRMAEFNAKV-ENYNKQIASLQSDLQGYVANA-AMYAARSKV 227

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                 +R  L   QKD    +        +QN+L + ER    +         +  +  
Sbjct: 228 AGDVHKMRMEL---QKDQVGSRL---STLSAQNELMEVERSQISAQQ-------QAASAR 274

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             +     E       +  EI +DL   Q   A+                + +     ++
Sbjct: 275 NKLAAAVSEKEGYIQTWKAEIYKDLIVAQHKLAEAKGAYQKAILHSNMVALKADEDAVVL 334

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                S  +    ++ LM +VP  K   I   ++ + +  V+ G  + V+F  +   +  
Sbjct: 335 NIAKISVGSVVTPAEKLMTLVPVGKGLEIETVLSGQDVGFVRLGDKSLVKFATFPYQQYG 394

Query: 362 KFKAIIEKIDPIIS-----------QQDNNLQTQEYYEVILKITDLAFS--DNNIELRNG 408
             +A ++ I                +   +  ++ +Y V L++         N    + G
Sbjct: 395 GAEATVKTISADSFVSGGSSGPSSEEVTPDNTSKSFYSVRLRVDKYTLHGVPNFFHPQPG 454

Query: 409 FPAEVLFTAKNTTLAQEII 427
            P          T+ Q ++
Sbjct: 455 MPVTAEIRVGKRTVMQYLL 473


>gi|146339765|ref|YP_001204813.1| HlyD family secretion protein [Bradyrhizobium sp. ORS278]
 gi|146192571|emb|CAL76576.1| Putative HlyD family secretion protein [Bradyrhizobium sp. ORS278]
          Length = 472

 Score =  212 bits (540), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 62/455 (13%), Positives = 141/455 (30%), Gaps = 31/455 (6%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                +    P  L R+T L++  +    + W++   ++I   +SG++++      ++  
Sbjct: 24  PAALEITETPPNPLGRITALALCTVTFAALGWAVFGKVDIVAVASGKVISHTRTQVVQPF 83

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +  +K   V+ G ++  G  L+  +    T   D  +  +           + LD + N
Sbjct: 84  ETASVKAVLVQPGQRVRAGDALIELDRTAVTAEADRARSDLIASLLDEVRLAAFLDGVKN 143

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
               L    E  +           +         ++     L             R  L+
Sbjct: 144 GPFDLVAGAEPLD----------RARAQAQLTAQLAMRASQLAALAQERAQHVAEREALQ 193

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +     L    +   +     E    S   L + ++++ ++  EL  N  +   +  
Sbjct: 194 QTVAKYEQTLPMVTQRADIRTKASEIGNASIIALLESQQLLVETRSELEINKAKIVALDA 253

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I  L  +     A    +  RDL   +         LT   +  E +T+ +PI GT+  
Sbjct: 254 TIAGLDQKIAATEAEIRDKAMRDLATARERARAAGEALTKAARRAELQTLRAPIDGTVQQ 313

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               ++      +Q L+ +VP      + A V  + +  V+ G    ++   +   R   
Sbjct: 314 MHIAAAGAVVTPAQQLLSVVPDDDRIEVEAVVENRDVGFVEAGQRVELKVDAFPFTRYGL 373

Query: 363 FKAIIEKIDPIISQQDNNLQTQE------------------YYEVILKITDLAFSDNNI- 403
               +  +D        N Q  +                   Y V + +       +   
Sbjct: 374 LGGKVTSVDRDAEAAPVNPQGVQGAERQADQTDRVEASERLRYMVHIALDRATLDVDGRA 433

Query: 404 -ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
             L  G   +         +   ++ P++++    
Sbjct: 434 AALVPGMSVKAEILTGKRRIIDFLLAPLSEHVHDA 468


>gi|90425983|ref|YP_534353.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90107997|gb|ABD90034.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 449

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 59/428 (13%), Positives = 141/428 (32%), Gaps = 22/428 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              +   L++  G    I W+    +     + G      +   ++    G++++  V  
Sbjct: 37  RFARSFGLIASAGTAAAIIWASFAELNEVTQAVGSFTPVGSEQVVQHLEGGLVERIAVRE 96

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G+ + +G  L+   D  T +     +    +L   I+T+ +               FE R
Sbjct: 97  GATVQKGDTLIVLRDAGTAEDDVALERQRVDLLAQIETQVA--------------LFEGR 142

Query: 135 EEQLLDFLGKYHSTC---SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E       G+Y       +  F    +          +++     NR     +       
Sbjct: 143 EPAFTSSNGRYAVEEIANTNAFAAAKTLEKNEYSRLSSQIAQARYNREATAIQLKGALDE 202

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           + + ++      +L      +     ++ + V ++          ++  +  + E+  + 
Sbjct: 203 VENAERVSKRFADLMRIGVATGLQAEERRQAVVRARSAADAAASREQGAIERLGEVEKQL 262

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               A      ++ +   + +     + +    + +++ TI +P+A  +   +  S    
Sbjct: 263 VSYGAELRSNRAQKVRDLEASLNVVDANIAKKNQRKQRLTITAPVAALVKSIEVNSIGQV 322

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               Q L  +VP +        V   +I +++ G +A +R   Y   R    + ++E I 
Sbjct: 323 VGSGQALATLVPLNTPLVAETSVRSSEIGYLRVGQSAQIRVGAYNFTRFGSLEGVVESIS 382

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           P   Q    +  Q YY V +K  D+         ++ G            T+ + I+ P+
Sbjct: 383 PSSFQ----IGGQYYYRVKIKPVDIRMPKAPGAVIQPGMEVTCEIITGRKTVMEYILTPL 438

Query: 431 TDNWPKIF 438
                  F
Sbjct: 439 QRTLGSAF 446


>gi|222149836|ref|YP_002550793.1| secretion protein-like protein [Agrobacterium vitis S4]
 gi|221736818|gb|ACM37781.1| secretion protein-like protein [Agrobacterium vitis S4]
          Length = 456

 Score =  212 bits (539), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 63/429 (14%), Positives = 149/429 (34%), Gaps = 24/429 (5%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L R  P S +         I   I  S+ +P+E  V++ G + +E     ++   + I++
Sbjct: 30  LHRTPPKSARMTIATVAALITSAILLSVFMPVERVVTARGRVASEAPNTVVQPLETSIVR 89

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G  +  G  L T +   +          + +L   ++  K+ +D  + +    +
Sbjct: 90  EILVREGQDVKAGQLLATLDPTFSRADQTTASRQMASLSAEVERLKAEIDGRDYQPRDGD 149

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                           +     + F    S    S+     ++ S+   +  L+ + ++ 
Sbjct: 150 S---------------FGKLQRRFFEARRSQYEASMSTFKAKISSLQTTQAQLQQELTVN 194

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  LS  ++   M   L EK   S+ D  + +  V + T  +RE   + ++    I  + 
Sbjct: 195 RQRLSLSEESEAMKSALVEKKYASRADGLKAKDWVLEVTGTIREVEGKLESGAHDIQSVQ 254

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +   +   +  +    L + Q      + +L   +K  +   + +P   T++     S 
Sbjct: 255 SQMEDQAQQWRSDAMGQLVKQQVALNAAIEELNKADKRSDLIELKAPEDATVLQIGDISI 314

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            + AQ +Q +  +VP +    +  +++ +    +K G    ++   +   R    +  + 
Sbjct: 315 GSVAQTAQKMFVLVPKAARLEVETEISTQDQGFIKVGQPVDIKLDAWPFARFGGLRGTVR 374

Query: 369 KIDPIISQ-------QDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKN 419
            + P   +              + +Y   + I D        +  L  G          +
Sbjct: 375 AVSPDSLKVSRGDGAATQGASERTFYIAKITIDDPHLKSNPADFSLIAGMTLVTDVVVGD 434

Query: 420 TTLAQEIIH 428
            T+A  +  
Sbjct: 435 QTVAAYLFD 443


>gi|190894589|ref|YP_001984882.1| putative HlyD family protein secretion protein [Rhizobium etli CIAT
           652]
 gi|190700250|gb|ACE94332.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CIAT 652]
          Length = 466

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 61/441 (13%), Positives = 140/441 (31%), Gaps = 25/441 (5%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L+   P  + RMTL  +  +I   I W+ +  I+  V + G+++     + ++   + I
Sbjct: 36  ELEERAPPRVARMTLYCVTALIASAIIWASVSSIDEVVIAPGKLVTTQPTIVVQPLETSI 95

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+   V+ G  +  G  L T +   +   +   K     L   +   ++ L   +     
Sbjct: 96  IRTIDVKAGEVVHAGQTLATLDATFSQADVGQLKTKFSALDAQVKRLETELTGEDYSKVA 155

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                E  + QL      +++   K F   I+     L     +   +   R +L    S
Sbjct: 156 GNTPDEQLQVQLFGQRRAFYTAQLKNFEQQIAGQSSVLAANRNQEAVLNDRRDNL----S 211

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           L+ A            K L++  + S   +            ++     +         +
Sbjct: 212 LIEATR----------KKLYDTESGSLLTMLGSRDARLDVEADITAVRGKADEAAHTYAK 261

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +      ++ +     L   +        +L  LE  R    + +P    ++     
Sbjct: 262 LLADRQAFIEDFRRAAMEQLADLRSQRDMAGEELKKLELRRNMVALTAPADAVVLDLAQR 321

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S  +  ++++P++ +VP +        +  + I  V  G  A ++   Y   +       
Sbjct: 322 SVGSVVREAEPVVTLVPINVPLEAEVSINTRDIGRVAVGKEARIKLDAYPFQKYGTASGE 381

Query: 367 IEKIDPII--------SQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFT 416
           +  I            +          +++  + + D     +D  + L  G        
Sbjct: 382 VRTISQDTFLSGQQEQAATPGQPAAAPFFKARILLADTRLNAADVPVRLLPGMTVSTEIK 441

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
             N T+    ++P+       
Sbjct: 442 VGNRTVISYFLYPLLRGLDNA 462


>gi|322513531|ref|ZP_08066632.1| HlyD family type I secretion membrane fusion protein
           [Actinobacillus ureae ATCC 25976]
 gi|322120684|gb|EFX92575.1| HlyD family type I secretion membrane fusion protein
           [Actinobacillus ureae ATCC 25976]
          Length = 478

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 67/422 (15%), Positives = 155/422 (36%), Gaps = 11/422 (2%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   +  SI+  +EI  ++SG++       EIK   +  +K+  V++G  
Sbjct: 58  RLVAYLIMLFLFLALVISIVSHVEIVATASGKLAFSGRSKEIKPIENAPVKEIFVQDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL-NNKYDVLEKAFESREE 136
           + +G  LL    +E        + S+   +      ++ L+ +  N   ++E        
Sbjct: 118 VQKGELLLHLTALEADADQQKNQSSLSLAKLERYRYETLLNAIETNHLPLIELTHNDFSH 177

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              +   + H    + F       Y+   +   R         ++     + R      Q
Sbjct: 178 ASEEDKTRIHHLIVEQFEAWQKQKYQKELVSKRREAEKQTVLANIRKYEGISR----VEQ 233

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           + L  +K LF   + S++D+  QE    ++  EL         +   + +  ++A L   
Sbjct: 234 EKLKDLKKLFNSKSASKHDVLAQENHHIEAVNELAVYQSCLNEVESDLRQAKEDAQLITQ 293

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            +  ++   L+QN  T      +L   E+ +    I +P++GT+   ++ +       ++
Sbjct: 294 LFKADVLEKLKQNVETEKQLKLELEKNEQRQVASVIRAPVSGTVQQLKTHTVGGVVTTAE 353

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            LM I P   +  + A +  K I  ++ G  A ++   +   R       ++ I     +
Sbjct: 354 TLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPYTRYGYLTGKVKNI---TLE 410

Query: 377 QDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
              + Q    +  I+ I            I L +G         +  ++   +  P+ ++
Sbjct: 411 AIKHPQLGLVFNTIISIDKKTLSSKEGKEIALGSGISVTAEIKTRERSVISYLSSPLEES 470

Query: 434 WP 435
             
Sbjct: 471 IS 472


>gi|86357016|ref|YP_468908.1| HlyD family protein secretion protein [Rhizobium etli CFN 42]
 gi|86281118|gb|ABC90181.1| probable protein secretion protein, HlyD family [Rhizobium etli CFN
           42]
          Length = 459

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 58/441 (13%), Positives = 146/441 (33%), Gaps = 25/441 (5%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L+   P  + RMTL  +  +I   I W+ +  I+  V + G+++     + ++   + I
Sbjct: 28  ELEERAPPRVARMTLYCVTALIAATIIWASVSDIDEVVIAPGKLVTTQPTIVVQPLETSI 87

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+   V+ G  +  G  L T +   +   +D ++     L   +   ++ L   +     
Sbjct: 88  IRTIDVKAGEVVHAGQTLATLDATFSQADVDQQQAKFSALDAQVKRIEAELAGDDYTMMA 147

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                E  + QL      +++   + F   I+    +L     +  ++ ++R D  ++  
Sbjct: 148 GTTPDEMLQVQLFGQRRAFYTAQLQNFEQQIAGQSAALAASRNQ-EAVLIDRRDTLSQIE 206

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             R               L++K + S   +            +L     +         +
Sbjct: 207 GART-------------RLYDKQSGSLITMLGSRDARLDVESDLTAVRGKADEAAHAFAK 253

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +      ++ +     L + +        +L  +E  R   ++ +P    ++     
Sbjct: 254 LKADRQAFIEDFRRAAMEQLVELRGQRDMADEELKKMELRRNMVSLTAPADAVVLDLAQR 313

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S  +  ++++P++ +VP +        +  + I  +  G  A ++   Y   +       
Sbjct: 314 SIGSVVREAEPVVTLVPINVPLEAEVSINTRDIGRIAVGKEARIKLDAYPFQKYGTASGE 373

Query: 367 IEKIDPIIS--------QQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFT 416
           +  I                 +     +++  + + D  L  SD  + L  G        
Sbjct: 374 VRTISEDTFMTGQQSEQTATPSQPAAPFFKARILLADTRLNVSDVPVRLLPGMTVSTEIK 433

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
               T+    ++P+       
Sbjct: 434 VGKRTVISYFLYPLLRGLDDA 454


>gi|119511778|ref|ZP_01630880.1| RTX toxin transporter [Nodularia spumigena CCY9414]
 gi|119463551|gb|EAW44486.1| RTX toxin transporter [Nodularia spumigena CCY9414]
          Length = 526

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 89/467 (19%), Positives = 168/467 (35%), Gaps = 48/467 (10%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           +F    + R  P    R  +L++IG+    I W+    IE  V ++G++  E  V E++S
Sbjct: 46  NFEQSVVLRQSP-IWSRTIMLTLIGLACFGIIWAYFAKIEQVVPATGQLKPEGTVKEVQS 104

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS------ 115
           P +G++K   +++G ++  G  LLTFE + T   +D  K     L       +       
Sbjct: 105 PVNGVVKTVHIKDGEKVKPGDLLLTFETVATVAELDALKKIRTALTEENQIYRRLMETSY 164

Query: 116 ---------------ALDFLNNKYDVLEKAFESREEQL--LDFLGKYHSTCSKVFNYGIS 158
                            +FL      L K  E    +L  L+ +        K   +   
Sbjct: 165 TTASEVGFSRGKLPVNAEFLLKSRTALIKENELLRAELSNLNTVAGLGVDEQKRLQFAQR 224

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                   +   +         ++ + +  ++ L+  Q  L  +K L E+  +SQ     
Sbjct: 225 EFDSRSAGRQLEVEKTKKELAQIQVRKNNTKSSLAIQQGILDKIKTLAEEGGISQLQYLN 284

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ---------- 268
           Q++ V     E+ +   EQ+ +   I +   E     A   K +   +            
Sbjct: 285 QQQQVQTLQAEIAQLDEEQQRLQFAIEQGQQEHKNTVAASGKNVLEKIADNKKRIAEIDS 344

Query: 269 --------NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                   N++T AD  SK++  +   E + + +P+AGTI   ++ +    A  SQ +++
Sbjct: 345 QFMKIVLNNEQTLADLNSKISQAQLNFEYQELHAPVAGTIFDLKAKNPGFVANASQEVLQ 404

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           IVP          +T K I  V++G    VR   +   +    K  +  I       D  
Sbjct: 405 IVPED-KYIAEVFITNKDIGFVREGMQVDVRIDSFPFSQFGDIKGQVMSIGSDALPPDET 463

Query: 381 LQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTA-KNTTLAQ 424
            +   +    + +          NI L++G          +  T+  
Sbjct: 464 YKFYRF-PATISLDKQYLDVQGRNISLQSGMSIVANIKVREERTVMS 509


>gi|186686589|ref|YP_001869785.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186469041|gb|ACC84842.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 527

 Score =  211 bits (536), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 79/464 (17%), Positives = 166/464 (35%), Gaps = 47/464 (10%)

Query: 17  LKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             R  ++++IG+    I W+    IE  V ++G++  +  + E+++P SG++K   V++G
Sbjct: 60  WSRTIMVTLIGLACFGIAWAYFAKIEQVVPATGQLKPQGTIKEVQAPVSGVVKTVNVKDG 119

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNL--RCHIDTEKSALDFLNNKYDVLEKAFES 133
            ++  G  LLTF+ I T   ++        L     I               +  +    
Sbjct: 120 QEVKSGDLLLTFDSIATVAELNSLNKIRIALIKENQIYRRLMGATTAGGSELLYLRGNLP 179

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL----- 188
           +E   L          + +    + +  R   + +   + + + + +L+++S+       
Sbjct: 180 QETAFLLKSRVALVEENDLLRTQLRNSGRDSSLGIDEQQRLRVAKKELDSRSAAAQLEVE 239

Query: 189 ----------------RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                           +A L+  Q  L  +K L E+  +SQ     Q++ V   T E+ +
Sbjct: 240 KIKKQLAQNKFKLEDSKASLAIQQGILDKLKILSEEGGISQLQYLNQQQEVQNRTAEVAQ 299

Query: 233 NIHEQKNMLRHINELYDEA------------------NLEFANYLKEISRDLEQNQRTFA 274
              E+K +   I +   E                       A    +  + +  N++  A
Sbjct: 300 LGEEEKRLQFDIEKGQQELSNTVAVSDKNVLDKIADNKQRIAAIDSQFMKVILDNEQRLA 359

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           D  SK++  +   + + + +P+AGT+   Q+ +    A  +  +++IVP          +
Sbjct: 360 DVNSKISQTQLNVKYQELRAPVAGTVFDLQAKNPGFVANPTTKMLQIVPKEN-YIAEVFI 418

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           T K I  V+KG    VR   +        K  +  I       D   Q   +    + + 
Sbjct: 419 TNKDIGFVRKGMKVDVRIDSFPYSEFGDIKGEVIGIGSDALPPDQTHQFYRF-PAKISLD 477

Query: 395 DLAF--SDNNIELRNGFPAEVLFTA-KNTTLAQEIIHPITDNWP 435
             +      N+ L++G          +  T+        T    
Sbjct: 478 KQSLVIKGKNVTLQSGMSISANIKVREERTVLSLFTELFTKQID 521


>gi|326316848|ref|YP_004234520.1| type I secretion membrane fusion protein, HlyD family [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323373684|gb|ADX45953.1| type I secretion membrane fusion protein, HlyD family [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 506

 Score =  210 bits (535), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 63/407 (15%), Positives = 130/407 (31%), Gaps = 18/407 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           SI   I+I   +SG I+  D    ++   + +I++  V  G  +  G  L+  +      
Sbjct: 96  SIFGKIDIVAVASGRIIVSDRTKLVQPLENSVIRRILVREGDHVEAGQALVQLDPTAAQA 155

Query: 95  L---IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL--DFLGKYHSTC 149
                D  + S ++           +         L  A  +  + L+  ++  +     
Sbjct: 156 DKTSFDETRRSAQSEWLRTRVLGDLVSRAARGEGGLRGAEAALPKTLVPREWSAEDADNA 215

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                   S V   L                +      L A L   ++     + L ++ 
Sbjct: 216 RAQLAAEWSDVTARLSKFAAERARREAEIATVRAMIDKLDATLPIVRQRERDFQALADQG 275

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +S +      +   +  +EL  ++  Q+  L        E       YL E  R L + 
Sbjct: 276 FMSGH----ANQDRMRERIELERDLGTQQARLHEAQAALQETQQTRDAYLAETRRTLSER 331

Query: 270 QRTFADEMSKLTILEK------TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           Q     E+ +L   ++           T+++P++GT+    + +      ++Q LM IVP
Sbjct: 332 QSQA--ELKRLQSAQEWNKAALRERLATLVAPVSGTVQQLAAHTEGGVVTEAQALMVIVP 389

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                     +  K I  V+ G   T++   +   R     A +E +       +     
Sbjct: 390 DGAHVSAEVTLENKDIGFVEPGQDVTIKLETFPFTRYGTVPAHVETVTRDAVNDEKRGAI 449

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                + L    +     +I+L  G             + + ++ PI
Sbjct: 450 FP-ALLKLDQAFINVDGKDIKLAPGMNLTAEIKTGQRRVIEYLLSPI 495


>gi|282901168|ref|ZP_06309098.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
 gi|281193942|gb|EFA68909.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
          Length = 521

 Score =  210 bits (534), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 76/459 (16%), Positives = 166/459 (36%), Gaps = 59/459 (12%)

Query: 17  LKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             R  +++++ +      W+    IE  V ++G++  E  V ++++P SG++K   V++G
Sbjct: 54  WSRTIMITLMLVACFGVGWAYYAKIEQVVPATGQLKPEGTVKDVQAPISGVVKSVHVKDG 113

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE--- 132
            ++  G  LLTFE + T   +     ++  +R  +  E      L N    +        
Sbjct: 114 QEVKPGDLLLTFESVATLAELG----ALNKVRAALIKENDIYRRLMNASGAISSELNFLG 169

Query: 133 ---SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                E   L          +++    + +      + +   + + + + +LE++S+  +
Sbjct: 170 GSLPAESAFLLKSRISLVEENQLLRSQLGNSRPETGVGIDEQKRLIVAKKELESRSNAAK 229

Query: 190 ---------------------ALLSSHQKDLTMMKNLFEKNAVS--------------QN 214
                                  LS  Q  L  ++ L ++  +S              + 
Sbjct: 230 FEVEKIRKQLSQTIVKRKDTQNSLSIQQGILDRVEVLAKEGGISQLQYLNQQQQVQNLKA 289

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHIN----ELYDEANLEFANYLKEISRDLEQNQ 270
           ++ Q E    +   +++    E  N +   +    E         A    +  R +  N+
Sbjct: 290 EIAQLEEEEKRLGFDIQRAEQEVTNTIAVTDKNVLEEIATNKKRIAEIDSQFMRIILDNE 349

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           +  AD  SK++  +   + + + +P++G I   Q+ +    A  +Q L++IVP +     
Sbjct: 350 QKLADISSKISQTKLNVKYQELRAPVSGIIFDMQAKNPGFVANPTQKLLQIVP-NDKYIA 408

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE-- 388
              +T K I  VK+G    VR   +        K  +  I       D   QT ++Y   
Sbjct: 409 EVFITNKDIGFVKEGMKVDVRIDSFPFSEFGDIKGKVTNIGSDALPPD---QTHQFYRFP 465

Query: 389 VILKITDLAFSDNN--IELRNGFPAEVLFTA-KNTTLAQ 424
             + +   A       I L++G          +  ++  
Sbjct: 466 ARVSLDKQAMESQGRSIPLQSGMAITANIKVREERSVMS 504


>gi|91786920|ref|YP_547872.1| Type I secretion membrane fusion protein HlyD [Polaromonas sp.
           JS666]
 gi|91696145|gb|ABE42974.1| Type I secretion membrane fusion protein, HlyD [Polaromonas sp.
           JS666]
          Length = 444

 Score =  209 bits (533), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 67/442 (15%), Positives = 143/442 (32%), Gaps = 20/442 (4%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEI 59
           M       +++  PA + RM  L+I +     + ++ L  ++I V++ G +        I
Sbjct: 14  MFSTAAIAMRQQPPARVARMVTLAICVMAAAALAYASLASMDIVVTAQGRVSASGKSKVI 73

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           +   +G++K   V +G  +  G  LL  +   T    D  +      +  +    + L  
Sbjct: 74  QPLEAGVVKAIAVRDGQSVKAGDLLLELDATATLADRDRLQREFWETQADVLRLNALL-- 131

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                     + +    +  D      +    V     S     +      +     +  
Sbjct: 132 ----------SGKVAWAEARDLPVAMVANQQAVLASRRSEQDARVAALDADIARRTADHE 181

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +    + L   L   +K   M + L     ++Q  L +    +     +L         
Sbjct: 182 AISANIAQLHNSLPLVRKKHEMREELATTGHIAQTGLIETRLELLGMEKDLSVMGKRLNE 241

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               ++    +     A +    S +L    R       +LT   + R+ +T+ SPI G 
Sbjct: 242 SAASLHASVQQRKQAQAEFRARASAELVDAIRKHDAARQELTKATQRRDLQTLRSPIDGV 301

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +      +      Q+Q LM IVPH     + A++  + I HVK G     +   +   R
Sbjct: 302 VQQLAVTTVGGVVTQAQALMTIVPHHAALEVDAQINNRDIGHVKVGQRVINKVETFDFTR 361

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI----TDLAFSDNNIELRNGFPAEVLF 415
               + +++ +         + +    Y V +K+    T    +  +  +  G       
Sbjct: 362 FGYIEGMVQWVGTDAV---IDPKLGPVYPVRIKLNSVETPNVVNGLHGAVTAGMSVSSDI 418

Query: 416 TAKNTTLAQEIIHPITDNWPKI 437
                 + +  I P+     + 
Sbjct: 419 RTGERRMIEYFIAPMLRYQQEA 440


>gi|239905986|ref|YP_002952725.1| HlyD family secretion protein [Desulfovibrio magneticus RS-1]
 gi|239795850|dbj|BAH74839.1| HlyD family secretion protein [Desulfovibrio magneticus RS-1]
          Length = 451

 Score =  209 bits (531), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 56/436 (12%), Positives = 151/436 (34%), Gaps = 16/436 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H    +      P + + +    +  +  L+ W+     +  +++SG+I++ +  + I  
Sbjct: 22  HPDAEELELTPLPRATRLVLHSILGLLAFLLLWACFAETDKVIATSGKIVSSEKNIIIAP 81

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
               II+   V  GS + +G  L+  +   +       +V     +  I   +S L  L 
Sbjct: 82  LQDSIIRSINVRLGSVVKKGDILMRLDPTFSNADASRIQVDETYQKLLIARLESELSGLP 141

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                     E               +  K+    +      L+   T++  +  + +  
Sbjct: 142 LSPPAGATPQEV-------------ESQVKLLAGRLEEFTAKLRSINTKIAEVQQSIVAG 188

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + + + +   +   Q+ + M K ++E+ + S+  + + E  + ++ + + +    Q+   
Sbjct: 189 QRQYTQMDKQVQVAQELVGMRKKVYEQGSDSRLSMLEAENHLAQTNVSMEQLKGSQEAKR 248

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
            ++ +   E      N+   ++  L + ++T        +  ++  E   I +P    ++
Sbjct: 249 HNLAQALAEKEGFIENWRNVVANQLSEARKTLQTLQEDASKAKRLHELSVIAAPSDAVVL 308

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +F+     +  + +M +VP          +    I +++    AT++   Y   +  
Sbjct: 309 DIVNFNPGTVIKSGETMMALVPLDSPLEAAVFIGTDDIGYIRPNDIATLKLDTYPFQKFG 368

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA---FSDNNIELRNGFPAEVLFTAK 418
                +  +       D     +  YE  ++IT +        +  L  G          
Sbjct: 369 YLDGELRTLAEDAQYLDTPSGRRLVYEGRIRITGMEHMRSLPKDFRLVPGMTLSADIKVG 428

Query: 419 NTTLAQEIIHPITDNW 434
           + T+   I  P+   +
Sbjct: 429 SRTVITYITWPLIRVF 444


>gi|90410089|ref|ZP_01218106.1| hypothetical protein P3TCK_04961 [Photobacterium profundum 3TCK]
 gi|90329442|gb|EAS45699.1| hypothetical protein P3TCK_04961 [Photobacterium profundum 3TCK]
          Length = 445

 Score =  207 bits (527), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 57/403 (14%), Positives = 129/403 (32%), Gaps = 18/403 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I+I VSS GEIL + ++  ++    GI+    V+ G  +  G P+   + ++    + 
Sbjct: 56  AQIDIVVSSRGEILLDSDIERVQHLEGGILDTILVKTGDYVYAGQPIARLKSVDRNTQLK 115

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              + I  L   I      ++     +           +    +  ++    S      +
Sbjct: 116 SATLDIVGLEIEITRYLGLINQTLPDFSSFSAYPSLITQNTESWQKEFQKNTSNQELMSL 175

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
              ++                  ++N+ +  R  L    K L++ + L+++   S  D+ 
Sbjct: 176 DIEHKKRL------------IASMKNRINSSRKQLGLINKQLSIKETLYKEEMASYIDVL 223

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             +        E+        N       L  + N   A+   E    + Q ++  + + 
Sbjct: 224 NMKVQETNMLREIENLDEALMNEQFQSARLEKQLNDTIASRNAEYQTQINQLEKDLSLKK 283

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++L       ++ T+ SP+ G +        S     ++ +  I P     +  AK+  K
Sbjct: 284 AQLPQHTDKVDRLTVYSPVDGVVDKVHFNFKSAVIPPNESIADISPIKNTLHGEAKIPKK 343

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  V+ G    ++F  Y   +       I  I     +++ N     +Y   + I    
Sbjct: 344 DMGFVEIGQEVKLKFDTYNFAKYGFVSGTINSISRSSYEEEENE----FYIAKITIQQDF 399

Query: 398 FSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
              +  +  L             +       + P+       F
Sbjct: 400 LEKSGAKYTLSPYMEFTADIKTGSRYAIDYALKPVMSAMEDAF 442


>gi|123209|sp|P26761|RTX1D_ACTPL RecName: Full=RTX-I toxin determinant D; AltName: Full=APX-ID;
           AltName: Full=Cytolysin ID; Short=CLY-ID; AltName:
           Full=HLY-ID; AltName: Full=Toxin RTX-I secretion protein
           D
 gi|1292896|gb|AAB00967.1| hemolysin determinant [Actinobacillus pleuropneumoniae]
          Length = 477

 Score =  207 bits (526), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 67/429 (15%), Positives = 156/429 (36%), Gaps = 26/429 (6%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  L ++ +   +  SI+  +EI  +++G++       EIK   + ++K+  VE+G  
Sbjct: 58  RLIAYLIMLFLFLALVISIVSHVEIVATATGKLAFSGRSKEIKPIENALVKEIFVEDGQF 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +   LL    +         K S+   +               +Y++L +A  +    
Sbjct: 118 VEKDQLLLHLTALGADADQQKTKSSLSLTKLE-----------RYRYEILLEAVAADRLP 166

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKSSL-----LR 189
           L++         ++     I  +         K    + + L R + E ++ L       
Sbjct: 167 LIELTKDEFKHATEEDKTRIRYLITEQFEAWQKQKYQKELALQRREAEKQTVLANIRKYE 226

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                  + L  +K LF   + S++D+  QE    ++  EL         +   + +  +
Sbjct: 227 GSSRVENERLKDLKKLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKE 286

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +L    +  +I   L+QN         +L   E+ +    I +P++  +   ++ +  
Sbjct: 287 EIHLITQLFRADILEKLKQNVEAEKQLSLELEKNEQRQIASVIRAPVS-YVQQLKTHTVG 345

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                ++ LM I P   +  + A +  K I  ++ G  A ++   +   R       ++ 
Sbjct: 346 GVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPYTRYGYLMGKVKN 405

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
           I     +   + Q    +  I+ I     S  +   IEL +G            ++   +
Sbjct: 406 I---TLEAIEHPQLGLVFNSIISIDRKTLSGKDGKEIELGSGMSVTAEIKTGERSVISYL 462

Query: 427 IHPITDNWP 435
           + P+ ++  
Sbjct: 463 LSPLEESVS 471


>gi|148256715|ref|YP_001241300.1| HlyD family secretion protein [Bradyrhizobium sp. BTAi1]
 gi|146408888|gb|ABQ37394.1| Putative HlyD family secretion protein [Bradyrhizobium sp. BTAi1]
          Length = 473

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 58/455 (12%), Positives = 137/455 (30%), Gaps = 31/455 (6%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                +    P  L R+T L++  +    + W+ L  ++I   +SG++++      ++  
Sbjct: 25  PAALEITETPPNPLGRITALALCTVTFAALGWAFLGKVDIVAVASGKVISHTRTQVVQPF 84

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +  +K   V+ G ++  G  L+  +    +   D  +  +           + LD +  
Sbjct: 85  ETASVKAVLVQPGQRVRAGDALIELDKTSVSAEADRARSDLIASLLDEVRLAAFLDGVKI 144

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
               L    +  +           +         ++     L             R  L+
Sbjct: 145 GPFDLVVGVDPLD----------RARAQAQLTAQLAMRASQLAALAQERAQHIAEREALQ 194

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +     L    +   +     E    S     + ++++ ++  EL  N  +   +  
Sbjct: 195 QTVAKYEQTLPMVAERAEIRTKASEIGNASIIARLESQQLLAETRAELAINKAKIIALDA 254

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I  L  +     A    +  RDL   +         LT   +  E +T+ +PI GT+  
Sbjct: 255 TIAGLDQKIAATEAEIRDKAMRDLATARERARAAGEALTKATRRAELQTLRAPIDGTVQQ 314

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               ++      +Q L+ +VP      + A V  + +  V+ G    ++   +   R   
Sbjct: 315 MHGAAAGAVVTPAQQLLSVVPDDDRIEVEAVVENRDVGFVEAGQRVELKVDAFPFTRYGL 374

Query: 363 FKAIIEKIDPIISQQDNNLQTQE------------------YYEVILKITDLAFSDNNIE 404
               +  +D        N    +                   Y V + +       +   
Sbjct: 375 LGGQVTSVDRDAEAAPVNPNGVQGAERQADQTDRVEASERLRYMVHIALDRSTLDVDGRT 434

Query: 405 --LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
             L  G   +         +   ++ P+ ++    
Sbjct: 435 AALVPGMSVKAEILTGKRRIIDFLLAPLREHLHDA 469


>gi|298493131|ref|YP_003723308.1| secretion protein HlyD family protein ['Nostoc azollae' 0708]
 gi|298235049|gb|ADI66185.1| secretion protein HlyD family protein ['Nostoc azollae' 0708]
          Length = 498

 Score =  206 bits (524), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 73/469 (15%), Positives = 166/469 (35%), Gaps = 42/469 (8%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K ++   P   + +     + I G I+W+    I+   ++ GE++    V  + S  SG 
Sbjct: 32  KAVQELPPLYARLLAGTISVIIFGTISWAHFSEIDEVATAPGELIASTQVRPVTSLGSGY 91

Query: 67  IKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           I   +V+ G  + +   L+  +              I L +  ++ L      EK+A   
Sbjct: 92  ILAVKVKEGDHVTKDQILIERDPNLQQTDVNRLAKAIKLIEDDLQRLEAERIREKTAGTK 151

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           L ++           ++   +   +   +        +S +  +L    T   +   N +
Sbjct: 152 LQDELLNSRLLDYKAKQAAAEAEAQRQLSIINQAKVRLSRLQENLANAQTSFTNAQTNLV 211

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---------- 229
           + E   + +   L+  QK    ++ L    AV + D  + +  + +++ +          
Sbjct: 212 NAEGIRAKVDNNLTIAQKREENLRALLNPGAVPRVDYLEAQERLNRASTDIIKSSDEVTN 271

Query: 230 --------------LRENIHEQKNMLRHINELYDEANLE----FANYLKEISRDLEQNQR 271
                         L ++I  Q   +R   + Y  A  +     +    EI   + + + 
Sbjct: 272 TKNRLTEAKDKVRSLEKDIAAQDQEIRQAEQAYQAARNQGLRLASERQSEILTQINKRKE 331

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
              +   +L   +  ++++TI +P+AGTI   +  ++    Q  + L+ I P  +   + 
Sbjct: 332 ELTNVAGQLEQAKMQKDRETIKAPVAGTIYKIK--ATKGPIQSGEELLSIAPEGEEMLLE 389

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            KV  + I  +++   A V+   +           + +I P      +       +   +
Sbjct: 390 VKVLNRDIGFIRQNMKAKVKLEAFPFQEFGVVDGEVLQISPNAVVDKDLGLV---FSTRI 446

Query: 392 KITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           K+T  +       +E   G  A      +  ++   I+ PIT  +   F
Sbjct: 447 KLTQHSMNLRGQEVEFTPGMAANAEIITREKSILTFIVEPITRRFSDAF 495


>gi|54303423|ref|YP_133416.1| hypothetical protein PBPRB1756 [Photobacterium profundum SS9]
 gi|46916853|emb|CAG23616.1| hypothetical protein PBPRB1756 [Photobacterium profundum SS9]
          Length = 445

 Score =  206 bits (524), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 57/403 (14%), Positives = 129/403 (32%), Gaps = 18/403 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I+I VSS GE+L + ++  ++    GI+    V+ G  +  G P+   + ++    ++
Sbjct: 56  AQIDIVVSSRGEMLLDSDIERVQHLEGGILDALLVKTGDYVYAGQPIARLKSVDRNTQLE 115

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              + I  L   I      ++     +           +    +  ++    S     G+
Sbjct: 116 SATLDIVGLEIEITRYLGLINQTLPDFSSFSAYPTLITQNTESWQKEFQKNTSNQELMGL 175

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
              ++                  ++N+ +  R  L    K L++ + L+++   S  D+ 
Sbjct: 176 DIEHKKRL------------IASMKNRINSSRKQLGLINKQLSIKETLYKEEMASYIDVL 223

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             +        E+        N       L  + N   A    E    + Q ++  + + 
Sbjct: 224 NMKVQETNMLREIENLDEAVMNEQFQSTRLEKQLNDTIARRNAEYQTQINQLEKDLSLKK 283

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++L       ++ T+ SP+ G +        S     ++ +  I P     +  AK+  K
Sbjct: 284 AQLPQHTDKVDRLTVYSPVDGVVDKVHFNFKSAVIPPNESIADISPIKNTLHAEAKIPKK 343

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
               V+ G    ++F  Y   +       I  I     +++ N     +Y   + I    
Sbjct: 344 DTGFVEIGQEVKLKFDTYNFAKYGFVSGTINSISRSSYKEEENE----FYIAKITIQQDF 399

Query: 398 FSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
              +  +  L             +       + P+       F
Sbjct: 400 LEKSGAKYTLAPYMEFTADIKTGSRYAIDYALKPVMSAMEDAF 442


>gi|158339542|ref|YP_001520931.1| HlyD family secretion protein [Acaryochloris marina MBIC11017]
 gi|158309783|gb|ABW31399.1| HlyD family secretion protein [Acaryochloris marina MBIC11017]
          Length = 528

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/479 (17%), Positives = 178/479 (37%), Gaps = 56/479 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + +  P   + +    +      + W+ L  IE ++ ++G++  +  V EI+SP +G++K
Sbjct: 46  ILQQSPVWSRAIIWGIVGAASAALAWACLFQIEEAIPATGQLEPKGAVKEIQSPVAGVVK 105

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK--YDV 126
           + +VE G  + +G  LL      T   I   +   +NL    D  +  L   +N    DV
Sbjct: 106 EIKVEEGQLVKKGEVLLVLNRQGTRSEIQSLEHQRRNLVQVNDYYRQQLQGQSNAPLPDV 165

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYG-----------------------ISSVYRS 163
           ++ A  +        + +     +++                           +++    
Sbjct: 166 IDSALINSTRDRQSLVAENKLYRAQLNGAQEWRHFSAEERQRLQSGLTQGSSSVAAAQAR 225

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +     ++R I +     + + +  +  L+ +Q+ +  ++  + K A+++    QQ+  V
Sbjct: 226 INQADKQLRQIEVQLEQTKIQLASAQQTLALNQEIVQDIEEAYRKGAIARVQFKQQQNEV 285

Query: 224 YKSTLELRENIHEQKNMLRHINELYDE-------------------------ANLEFANY 258
              T E+     EQ  +LR + ++  E                              +  
Sbjct: 286 QTGTAEVSRLQQEQIRLLRQLEQVGQEKQQAQAQALNTVATNQRELLDRIAANKKRISEI 345

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             ++++ +  NQRT AD  ++L   + T + + + +P+ G +   +  +    A  S+P+
Sbjct: 346 DSQLTKAIVDNQRTIADLENRLQQAKLTLDYQELKAPVDGMVFDLKPSTPGFVANASEPV 405

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +KIVP       +  +T K I  ++ G  A VR   +        K  +E I        
Sbjct: 406 LKIVPADN-LKAKVYITNKDIGFIQTGMAADVRIDSFNFSEFGDIKGTVESIGSDALPPT 464

Query: 379 NNLQTQEY-YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
              Q   +   V L    L   +  + L++G    V    +   +       ITD + +
Sbjct: 465 EVRQFYSFPAVVKLDSQTLKTKERQLALQSGMSVNVNIKVRKRPVIS----LITDRFSR 519


>gi|186683672|ref|YP_001866868.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186466124|gb|ACC81925.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 515

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/465 (17%), Positives = 168/465 (36%), Gaps = 42/465 (9%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  + L    P    R  L  ++G  G+I  W++L  ++ + S+ G +  E    ++ SP
Sbjct: 45  YGTEELLDALPKLWTRSMLYLLVGFAGIILPWAMLSKVDETGSARGRMEPEGATQKLDSP 104

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G I    V+ GS +  G  L+  E       +   +  ++ L       +S LD L N
Sbjct: 105 VTGSITAVNVKEGSTVKAGQILVQLESDVLRTDLQQVQTKLEGLLNR----RSQLDLLKN 160

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  +     E + +          S   +  +   S+       KL  ++    N    +
Sbjct: 161 QIILTINIQEQQNKSQELEKLAQVSQAQQNLDAKQSTYNSQRLEKLALVQQASQNISSTK 220

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST--------------- 227
               L ++  S    ++   + L  + A+ Q  + + E+I  +S                
Sbjct: 221 IAQKLAKSRFSRDVTEVARYRQLVRQGAIPQIKVVELEKIAEESQRLQEQAKSDITQAKL 280

Query: 228 --------------------LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                                + + ++ EQ++  R + +    A L+    LK++   + 
Sbjct: 281 RFKEELNRYQSLMSQAFSDIQQAKLSLQEQQSSYRSVVQAGRLAVLKNQEQLKDLQGQIT 340

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             Q   A   S++  L+   +Q+ + SPI GT+         +  +  Q + +I P++  
Sbjct: 341 SLQSEIAQTGSQIASLQLQMQQRIVRSPIDGTVFELPIHKPGSVVEPGQMIAQIAPNNTP 400

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++A++  +Q   +K G    ++F  Y        +  +  I P    Q  N    E Y
Sbjct: 401 LILKAQMPSQQSGFLKVGMPVKIKFDAYPFQDYGVVQGRVSWISPNSKVQAANQGNIETY 460

Query: 388 EVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           E+ + +       ++  I L  G  A      +   +   I+ P 
Sbjct: 461 ELEISLLQPYIQTANKRIPLTPGQTASAEVVIRQRRIVDFILDPF 505


>gi|158336321|ref|YP_001517495.1| HlyD family secretion protein [Acaryochloris marina MBIC11017]
 gi|158306562|gb|ABW28179.1| HlyD family secretion protein [Acaryochloris marina MBIC11017]
          Length = 531

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 87/454 (19%), Positives = 168/454 (37%), Gaps = 59/454 (12%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            L  IE ++ ++G++  +  V  ++SP +G++K+ +VE G  + +G  L+      T   
Sbjct: 75  CLFEIEEAIPATGQLEPKGAVKAVQSPVTGVVKEIKVEEGDLVKKGDVLIVLNRKATRSE 134

Query: 96  IDLKKVSIKNLRCHIDTEKSAL--------------DFLNNKYD----VLEKAFESREEQ 137
           I+  K   +NL    +  +  L              + +N+  D    V E      +  
Sbjct: 135 INSLKRQRRNLVQVNEYYRQQLKGQTDTPLPDLIDPELINSTRDRQSLVAENKLFRAQLN 194

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             +    + +   +  N G+     S+     R+         +E +    +  L+S Q+
Sbjct: 195 GANNAQAFSAEERQRLNSGLLQGKTSVAAAQARVMQGDKQLRQIEVQLEQTKIQLASAQQ 254

Query: 198 DLTMMKNLF-------EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L + K +        +K A+++    +QE  V     E+     EQ  +LR + ++  E
Sbjct: 255 TLALNKEIVADIEDAHKKGAIARVQFKRQEDEVQSGEAEVSRLQQEQIRLLRQMEQIGQE 314

Query: 251 -------------------------ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
                                              ++++ +  NQRT AD  ++L   E 
Sbjct: 315 KLQSQAQALNTVATNQRDLLDRIAANQQRITEIDSQLTKAIVDNQRTIADLENRLQQAEL 374

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           T + + + +P+AG +   Q  S    A  S+P++KIVP       +  +T K I  ++ G
Sbjct: 375 TLDYQELKAPVAGVVFDLQPSSPGFVANASEPILKIVPEDN-LKAKVYITNKDIGFIQTG 433

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS---DNN 402
               VR   Y        K  IE I           Q   +   ++K+            
Sbjct: 434 MPVDVRVDSYNFSEFGDIKGTIESIGSDALPPTEVRQFYSF-PAVVKLDTQTLKTRGRRE 492

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
           ++L++G    V    ++      II  ITD + +
Sbjct: 493 LDLQSGMSVSVNIKVRDRP----IISLITDRFSR 522


>gi|186685935|ref|YP_001869131.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186468387|gb|ACC84188.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 512

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 75/474 (15%), Positives = 178/474 (37%), Gaps = 60/474 (12%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L +  P    R    +IIG+    + W+ +  I+ S+ ++G++  +  V EI++P  G++
Sbjct: 24  LLQQTPT-WSRAIAWTIIGVSTFTVIWASVFQIDESIHATGKLEPQGAVKEIQAPVHGVV 82

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLI-DLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
            +  V++G ++ +G  L+T E   +   +  LK+     L      E+    +       
Sbjct: 83  NEILVKDGQRVKKGETLITLEKTSSEAELTSLKQSRAAQLLAKQSLEQENDFYRRQLQGS 142

Query: 127 LEKAFESREEQLLDFLGKYHS---------TCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +     +++  LL    +              ++++   ++       +   +   +   
Sbjct: 143 ISLQQVAQQTALLKIKPELAFLTKSRAAIIAENQLYRTQLNGATAESPLTREQQLRLRNR 202

Query: 178 RLDLENKSS---------------------LLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +++LE++ +                       + LL+ +Q+ L   + L ++ A+SQ   
Sbjct: 203 QIELESRLATANLETGQTQQQFFQTQAQLTSAKELLTINQQILRRFEPLAQQGAISQVQY 262

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            +Q++ V     E+     EQ+ +   I +  ++     A   +++   +  N +  A+ 
Sbjct: 263 LKQQQDVSTKQAEVIRLNREQQRLQLAIAQSNEKLRNTAAVSQEDLLAKITDNDKKIAEI 322

Query: 277 MSKLT-------------------------ILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            S+LT                           ++T + + I +P+ GT+   ++ ++   
Sbjct: 323 DSQLTKVIVDNQKRLYEINGQIGEIESKLIQAQQTLKYQKITAPVDGTVFELKAKTAGFV 382

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S+PL+K+VP          +T + I  V++     VR   +        K  + +I 
Sbjct: 383 INSSEPLLKLVPSDN-LVANVYITNRDIGFVRERQQVDVRIDSFPFQEYGDIKGELIEIG 441

Query: 372 PIISQQDNNLQTQEY-YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
                 D   +   +  +V L    L  +   I L++G   +     +  T+  
Sbjct: 442 SDALPPDQVYKFWRFSAKVRLHGQKLLINQRQIPLQSGMSIDANVKLRQRTIMS 495


>gi|307320741|ref|ZP_07600153.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
 gi|306893668|gb|EFN24442.1| type I secretion membrane fusion protein, HlyD family
           [Sinorhizobium meliloti AK83]
          Length = 401

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 64/398 (16%), Positives = 144/398 (36%), Gaps = 8/398 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R    +++  T + I G++ +      L IEI     G+++    V  ++   +G I 
Sbjct: 6   IERPVSPTVRLTTWVLISGLVAIFVGGYWLKIEIVARGQGKVIPVSRVQLVQPQTNGRII 65

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN----KY 124
           +  V  G  +  G  L+  + +     I L+   ++  R      +  +  L N      
Sbjct: 66  RILVTEGQPVKAGDLLVGMDTVSVESQIKLRLTEVRRQRRGATVARVIIAALTNVAVAND 125

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DVL     + E +  D   +       +    ++S+   +     ++  +  +R+  + +
Sbjct: 126 DVLAAGRAAFERERHDL--EVIDGAEALIEAVLTSLRDQVARINAQLDRVEQSRITQQAR 183

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               R+ L    +       L +K A+S+ D  ++ R      LE+  +  E   +    
Sbjct: 184 LQKARSDLDISSRKFLSAGKLKDKGAISEVDYFERLREQRARELEVLISESELNILAAEA 243

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N L  +     +  ++   + L +   + A   ++L+          I +P  G +    
Sbjct: 244 NALARQRQSIISTAVENYQKQLNEASTSLAGLEAELSAARNQLALLAIRAPADGKVENLT 303

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
            F+   + +    LM IVP      I A    + I  ++KG  A V+F  +   R    +
Sbjct: 304 VFTIGGFVEAGSTLMSIVPSGDGMEIEAFFDNRDIGFLEKGQEAFVKFDAFPAERFGIVR 363

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             + ++      + + +  +  Y + L +         
Sbjct: 364 GRVTRVGADA--RGDIVPGKWVYAIHLVLDQETIGIGG 399


>gi|114762696|ref|ZP_01442130.1| HlyD family secretion protein [Pelagibaca bermudensis HTCC2601]
 gi|114544606|gb|EAU47612.1| HlyD family secretion protein [Roseovarius sp. HTCC2601]
          Length = 431

 Score =  204 bits (518), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 65/406 (16%), Positives = 146/406 (35%), Gaps = 16/406 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WSI   +     + G I   D +  ++S   G +    VE G  + +G  L++    E  
Sbjct: 36  WSIFANVYEVAKAHGVIEPVDQIRPVESRQGGRVALVAVELGEYVEEGELLVSLSRSEVV 95

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              D  +  I  L    +   + +      +   E  F +             +      
Sbjct: 96  SRRDELRAQIAGLEIETEMLDAQVSQRPADFSRWEDEFPT-----------LVAREEASL 144

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              ++ +         R+     +   + ++  L+   L+  ++  ++ ++L  +N  +Q
Sbjct: 145 EAALALLEVQRLEVKARIAQRTSDIAAVGDQLPLIAEELAMLERSQSVTEDLRSRNLATQ 204

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
              ++Q + +    L  +E   E++   ++I EL         + + E    + + Q   
Sbjct: 205 QQADEQMQRLDGLRLRQQELRGERERATQNIEELEATLRRIDLDAVAEARSRIAEAQAQL 264

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++   LE+   +  I +P+AG +      S+ +       +  IVP S       +
Sbjct: 265 RGLKAREAALEQEVVEVDIRAPVAGFVQSLPDESTGDVIDPGGVVATIVPGSGELRFAGR 324

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           + P+ I  V++     ++   Y   R    +  + +I P       + + + +YEV++ I
Sbjct: 325 LAPRDIGFVRQDQPVRLKIDSYDFSRYGALEGRVVEISPTS---TVDQRGESFYEVLVGI 381

Query: 394 TDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
               F  +D+ ++L  G   E        T+ Q +  P+  N    
Sbjct: 382 EQTFFRNADDGLDLMPGMTGEADIVTGAKTVFQYVWKPVYTNLDLA 427


>gi|257093097|ref|YP_003166738.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045621|gb|ACV34809.1| type I secretion membrane fusion protein, HlyD family [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 458

 Score =  203 bits (517), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 53/418 (12%), Positives = 134/418 (32%), Gaps = 33/418 (7%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           +  ++I   + G+++ +  +  ++   SGI+K+  V  G  +  G  L+  + + +    
Sbjct: 53  IGELDIVAVADGKLIPQSYLKIVQPAESGIVKEILVSEGQSVAAGQVLMRMDTLISDADF 112

Query: 97  DLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +         R     ID E +   +   + D  E A E           +YH+  + + 
Sbjct: 113 NALTTDHLRKRATLARIDAELANRPYAPPRGDAPELARE--------MAAQYHANRAALA 164

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     LK +     +  + R         L   L  ++      + L        
Sbjct: 165 AALAEEESHLLKARHDLASAQQIRRK--------LADTLPHYRAQDEAFEGLARDGFAGA 216

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
              + ++R   +   EL+   H  ++    I++   +     + Y +++  +  + Q   
Sbjct: 217 LLASDKKRERIEKEQELKTQDHLIESARAAISQSERKLAQIASEYRRQLHSERNEIQGHT 276

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                +L      +    + +     +    + S     Q    L+ +VP   +      
Sbjct: 277 DRLAQELAKQSHRQTLLELKASQESVVKDLATHSPGTVVQPGTVLLTLVPKDDILRAEVW 336

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-------- 385
           V+ + I  V++     ++F  +   +    +  +E I    +    +  ++         
Sbjct: 337 VSNEDIGFVRQRQPVKLKFAAFPFQKYGMVEGTVEHIGADSADGPGSGASEAGRNDSPAR 396

Query: 386 ----YYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
                Y+ ++ +    L        L  G            T+A+ ++ P+   W + 
Sbjct: 397 SRPLVYKALVALKQPHLEIDGQRFALSAGMQTHAEILLGRRTVAEYLLSPVRKAWHEA 454


>gi|254423923|ref|ZP_05037641.1| auxiliary transport protein, MFP family [Synechococcus sp. PCC
           7335]
 gi|196191412|gb|EDX86376.1| auxiliary transport protein, MFP family [Synechococcus sp. PCC
           7335]
          Length = 528

 Score =  203 bits (516), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 76/463 (16%), Positives = 175/463 (37%), Gaps = 40/463 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + +  P   K + L  +   +  +TW+ +  +E +V++ G++  E  V  +++P  G+++
Sbjct: 62  ILKQSPRWAKAIALSIMGVTVASVTWACIARVEETVAAQGKLEPEGVVQLVQAPVGGVVE 121

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-------RCHIDTEKSALDFLN 121
           +  V  G  + +G  + T ++  T   ++  +   + L       R  +     A+    
Sbjct: 122 EVLVTEGELVERGQVVATLDETATEAQLESNREIAERLSAENNYYRAQLSGVADAVAPAG 181

Query: 122 NKYDVLEKAFESRE--EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              D++++  +  +  +    +  +     S +    +  +  +L    ++ +   L   
Sbjct: 182 ISADLVQRGRDRAQLLQSNQLYQAQITGDTSGLSPDQLDRMETALSRLDSQQQINQLQSS 241

Query: 180 DLENKSSLLRALLSSHQKDLTM-------MKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            L  +    R  L++ Q +L         ++ L E+ AV++    QQE+ V  S  ++  
Sbjct: 242 QLSEQLKQTRLQLANAQSELATNQDILSRLRVLNEEGAVAELSYLQQEQEVNNSQTQVNT 301

Query: 233 NIHEQKNMLRHINELYDEA------------------NLEFANYLKEISRDLEQNQRTFA 274
              E   +   I++   E                   N   A    ++++ L +N R  A
Sbjct: 302 LRQEIDRLSFQISQADQEVSRTSFESREVLQDRISVNNQRIAEIDSQLTQRLLENDRQLA 361

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           +  S+   L ++ + + + +P+ GT+   ++      A  ++P+M+IVP       R  +
Sbjct: 362 ELASQRAQLAQSIKYQALTAPVDGTVFNLKANRPGYVANSTEPIMEIVPQD-ALVARVFI 420

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKI 393
             + I  V+ G    VR   Y+       +  +  I       D       +  EV+L  
Sbjct: 421 PNRDIGFVQVGQKVDVRIDAYSFSEFGDVEGTLTSIGTDALPPDEVFPFYRFPAEVLLDS 480

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
                    +ELR+G         +   +   +    TD + +
Sbjct: 481 QQFVADGVPLELRSGMSLNANIKLRKRRVITFL----TDLFQR 519


>gi|13470793|ref|NP_102362.1| secretion protein [Mesorhizobium loti MAFF303099]
 gi|14021536|dbj|BAB48148.1| probable secretion protein [Mesorhizobium loti MAFF303099]
          Length = 468

 Score =  202 bits (515), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 55/430 (12%), Positives = 135/430 (31%), Gaps = 29/430 (6%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S + +  +    +I LI  + L+P++  V++ G ++++   + ++   + I++  +
Sbjct: 40  PIPRSARGIVWIVSSLVIALIALAGLIPVDQVVTARGLVVSQSPNIVVQPLETAIVRSIE 99

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G ++  G  L   +   T+       + +  L   +   K+  +     YD L+ ++
Sbjct: 100 VREGQRVQAGQLLARLDATFTSADKAALAMQVSTLEAEVARLKAEANGQAFTYDGLDPSW 159

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            + +  + +     +    + F      +   +    +     Y  RL + +    +R  
Sbjct: 160 -TLQVSIFEQRKAVYDAKVENFERQRDELSSVISRSQSDAEG-YRQRLTVADSIEQMRRQ 217

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L + Q    +   L E N    +               L       +   R    +  E 
Sbjct: 218 LEARQVGSRLNTLLAEDNRAEMSR-------------ALGNAEQTAEAAKRQQAAVAAER 264

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           +     +  E+S+ L +     +D    L   +   +   + S     +      S  + 
Sbjct: 265 DGYIQGWRAEVSQSLSEASSRISDARELLNKAKLRNQLVELKSQSDAIVQSVAKVSVGSV 324

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  +  + +VP      I   +  +    V  G    ++F  +   +       +  + 
Sbjct: 325 MQSGERFITLVPADAPLEIETNIVGRSSGFVHVGDPVVIKFDTFPYSQYGLAHGTVRALS 384

Query: 372 PIISQQDN------------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTA 417
           P                       + +Y   + I  +A         +  G P       
Sbjct: 385 PDSFSAQEQARDPNSSLAMLPSDAEPFYRTRISIDQVALHGVPAGFAVSPGMPVTADVKV 444

Query: 418 KNTTLAQEII 427
              T+ + I+
Sbjct: 445 GRRTILKYIL 454


>gi|312113108|ref|YP_004010704.1| type I secretion membrane fusion protein, HlyD family
           [Rhodomicrobium vannielii ATCC 17100]
 gi|311218237|gb|ADP69605.1| type I secretion membrane fusion protein, HlyD family
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 468

 Score =  202 bits (515), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 56/432 (12%), Positives = 138/432 (31%), Gaps = 33/432 (7%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + +  P   +   L   + ++  +  S L+ I+  VS+SG+++ +   + ++     I++
Sbjct: 37  IAKPIPRLSRATNLFVFLLVVSTVAASGLIKIDKIVSASGKLVADAPNIVVQPFDHSIVE 96

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYD 125
              V  G  + +G  L       +   +   +  + +L      ++ + S  D++ +   
Sbjct: 97  SIDVRKGDIVRKGQLLARLNPTISAADLTSMQDQLDSLTAKAARLEAQTSGKDYVPDPA- 155

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                              + +  + +F         SL+    ++            ++
Sbjct: 156 -----------------NSHSTLQAAIFYQQSREYKSSLEAHDQKINQYRTEMDGSSAQA 198

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              R  L        M + L      S+ +            + L +   E     R + 
Sbjct: 199 DHYRKRLGLAANVEGMRQELQNLQVGSKLNTILATDARLNMAVALSQMESESAQAGRKLA 258

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               E       +  ++S++L   +R  A      T      +   + +P    ++    
Sbjct: 259 AEEAEREAYVNRWDAQLSQELADTRRKLAQARQDFTKANLHNQLVVLTAPRDAVVLSVAK 318

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            S  +    ++PL+++VP      + A ++     +V+ G   TV+F     ++    K 
Sbjct: 319 ISVGSVVTSAEPLIQLVPLDAPLSVEADISGIDSGYVRPGDQVTVKFDTLPFLQYGSAKG 378

Query: 366 IIEKIDPIISQQDNNLQTQE----------YYEVILKITDLAFSD--NNIELRNGFPAEV 413
            +  I       +   Q             YY+  + +T++   D      L  G P   
Sbjct: 379 TVRLISADSFSPEATPQEGGSSLPNRPRTLYYKAYISLTEMQLHDTPPGFRLMPGMPLTA 438

Query: 414 LFTAKNTTLAQE 425
                  ++ + 
Sbjct: 439 DVKVGTRSILEY 450


>gi|149191322|ref|ZP_01869576.1| hypothetical protein VSAK1_11655 [Vibrio shilonii AK1]
 gi|148834858|gb|EDL51841.1| hypothetical protein VSAK1_11655 [Vibrio shilonii AK1]
          Length = 448

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 62/424 (14%), Positives = 149/424 (35%), Gaps = 14/424 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             + +  LL+ +  + L+  +    I+I VSS GE+L + ++  ++    GI+ +  V+ 
Sbjct: 36  TPVHKALLLTFLVSMVLLVIASQARIDIVVSSRGELLLDSDIERVQHLEGGILDELLVKP 95

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G P+   + ++   L+      +  L   +D  +     L  + D  E +   +
Sbjct: 96  GDVVYEGQPIAKLKSLDRNSLLSTNDSEVTQL--EMDRLRYQGLILGQEPDFSEFSDFPK 153

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
              L+    +  +  +       + +   ++ K T + S+   +    N+  L+R  L  
Sbjct: 154 ---LVSLNVQAWTQENSKNQSSETLIEHDIEHKKTLVDSMKRRKQSSNNQLKLIRKQLGI 210

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q        L+++   S  D+   +        E+        N    +  L  +    
Sbjct: 211 KQ-------TLYKEEMASYVDVLNMQVQESNMIREIENLDESIMNERFQLERLDKQLADL 263

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            AN   E    + Q ++  + +  +   L    ++  + +P+ G +        S     
Sbjct: 264 VANRNSEYQAQITQIEKELSIKRIQRPQLSDKVDRLVVYAPVDGVVDKVHFNFRSAVIPP 323

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + +  I P +   +  AK+  K++  V+ G    ++F  Y   +       I  I    
Sbjct: 324 GESIADIAPLNNQLHGEAKIPRKEMGFVEVGQQVKLKFDTYNFSKYGFLSGTITSISRSS 383

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            +++ +       ++++    L  S     L             +  + +  + P+    
Sbjct: 384 YEEEESEYYLA--KILIDHDYLERSGTKYSLSPYMEFTADIKTGDRRVIEYAMKPVMSAI 441

Query: 435 PKIF 438
              F
Sbjct: 442 DDAF 445


>gi|115523108|ref|YP_780019.1| HlyD family type I secretion membrane fusion protein
           [Rhodopseudomonas palustris BisA53]
 gi|115517055|gb|ABJ05039.1| type I secretion membrane fusion protein, HlyD family
           [Rhodopseudomonas palustris BisA53]
          Length = 478

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 66/455 (14%), Positives = 140/455 (30%), Gaps = 31/455 (6%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                +    P  L RMT L +  +    I W+IL  ++I   +SG+I+       ++  
Sbjct: 30  PAALEVTETPPNPLGRMTALVLCAVGFAGIGWAILGQVDIVAVASGKIIPVLRTQVVQPF 89

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +  +K   V  G ++  G PL+  +        D  K  +      +D  +        
Sbjct: 90  ETASVKAVLVRPGQRVRAGDPLIELDKTSALAEQDRAKKDLVA--ARLDDTRLTA----- 142

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +LE    +  E + D                ++     L             R  L 
Sbjct: 143 ---LLEGKSSALFESVEDATALDLGRARSQLAAQVAMRASQLANLAQEQAQRLAERDALR 199

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                +   L    +   +     E    S     + ++++ ++  E+     +   +  
Sbjct: 200 QTLVKVERSLPMVAERAEIRTKASELGNASIIARLESQQLLIEARAEVDITRTKIGALDA 259

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I  L ++     A        +L + +   +     L    +  E +T+ +PI G++  
Sbjct: 260 GILGLSEKITATDAEIRTSALTELARARERASAAEEALAKATRRAELQTLRAPIDGSVQQ 319

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +       +Q L+ IVP+     + A +  + +  V  G    V+   +   R   
Sbjct: 320 LHIATVGAVVTPAQQLLSIVPNDNRVEVEAVLENRDMGFVGIGQRVEVKVDAFPFTRYGL 379

Query: 363 FKAIIEKIDPI----------------ISQQDNNLQTQE--YYEVILKITDLAF--SDNN 402
               +  ID                   + + +N+Q  E   Y V + +    F   D  
Sbjct: 380 LDGKVIAIDRDAEVAPVNQSGTHGAQRAADETDNVQGSERLRYMVRIALEPGNFLIQDRA 439

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
             L  G   +         +   ++ P+ ++    
Sbjct: 440 AVLLPGMSVKAEIITGKRRIIDFVMAPLREHMHDA 474


>gi|114326858|ref|YP_744015.1| type I secretion adaptor protein [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315032|gb|ABI61092.1| type I secretion adaptor protein (HlyD family) [Granulibacter
           bethesdensis CGDNIH1]
          Length = 460

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 57/427 (13%), Positives = 142/427 (33%), Gaps = 30/427 (7%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           + +  TL+    +  L+  + L+P++  V++ G++++   +  ++   + I++   V  G
Sbjct: 35  TARHNTLIVFGLVTTLLLAAGLVPVDKVVTARGKVISRVPIQVVQPLDTAIVRSINVTEG 94

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L   +    +  +   +  +++L   +    +  D         +      +
Sbjct: 95  QVVHKGELLAQLDPTFASADMGQLRDQVRSLEAELARLHAEADGKPYITQA-DNPDSRLQ 153

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             +            + +N  IS +  ++   L    + Y  RL +      +R  L   
Sbjct: 154 AAIYAQRQAEWKFKVENYNQKISGLQNTVAKSLAEA-NYYRQRLAIATNVESMRHELERL 212

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q               S+ +         + + +L       +   R +  L  E +   
Sbjct: 213 Q-------------VGSKLNSLAAVDNRLEMSRDLATATSTAETARRDMQALVAERDGFI 259

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             +  +I +D++   R ++++   L   +   +   + +     I      S  +  Q  
Sbjct: 260 KEWAAKIGQDIQDEGRKYSEQSENLKKAQLRHKLVELQASGDAVIQSIAKVSVGSVLQSG 319

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
              + IVP      + A V  +    V  G T TV+F  +   +    + I+    P   
Sbjct: 320 AQFITIVPLDAPLEVEADVPGEDAGFVHVGDTVTVKFDTFPFTQYGGAQGIVRVTSPDSY 379

Query: 376 QQDNNLQTQ-------------EYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNT 420
            Q+++   Q              +Y+  + I  +   D      +  G P          
Sbjct: 380 SQNDSRDGQLKDTQQSSMAAEKTFYKARVTIDKVTLHDTPEGFHIVPGMPVTADIKVGQR 439

Query: 421 TLAQEII 427
           T+ + ++
Sbjct: 440 TILKYLL 446


>gi|119513163|ref|ZP_01632212.1| Secretion protein HlyD [Nodularia spumigena CCY9414]
 gi|119462184|gb|EAW43172.1| Secretion protein HlyD [Nodularia spumigena CCY9414]
          Length = 498

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 71/467 (15%), Positives = 149/467 (31%), Gaps = 38/467 (8%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K ++   P   + +     + + G I W+    I+    + GE++    V  + S   G 
Sbjct: 32  KAVQELPPLYTRVLAGTLSLVVFGAIAWANFSQIDEVAIAPGELIASTKVRPVTSLNGGS 91

Query: 67  IKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           I K  VE G  + +   L+  +                L    +  L+       +    
Sbjct: 92  ILKVNVEEGDHVTKDQVLIQRDTNLKQTDVTRLAQSAKLISEDLGRLQAERIGTTTTGTK 151

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           L N+      A     + + +                   +  +L    +   +   N +
Sbjct: 152 LQNELLESRLADYQARQAVTEAEANRQLAIIAQVKQRQKRLQENLVNAQSSFENAQANVV 211

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---------- 229
           + E     +   ++  Q+    ++ L    A+ + D  + +  + ++  E          
Sbjct: 212 NAEKVVVGVEKNVAIAQQREENLRTLIAPGALPRIDYLEAQERLNRANTEMTRAKDEVIN 271

Query: 230 --------------LRENIHEQKNMLRHINELY----DEANLEFANYLKEISRDLEQNQR 271
                         L+  I  Q   +R   + Y     +A    +    EI   ++Q Q 
Sbjct: 272 AQNRVTETQDRIASLKREIAAQDQEIRQAEQAYQGVLQQAQRLASERQSEILTQIKQRQE 331

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
              +   +L    K +  +TI +P+AGTI   Q  ++    Q  + L+ I+P  +   + 
Sbjct: 332 ELTNINGQLEQARKQQAGETIKAPVAGTIYKIQ--ATQGPVQAGEELLSILPAGEEILLE 389

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            KV  + I  ++ G  A V+   +           + +I P                + L
Sbjct: 390 VKVLNRDIGFIRPGMKAKVKMATFPFQEFGTIDGKVVQISPNAVVDKELGLVFP-TRIQL 448

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               +      +E   G  A      +  ++   II P+T  + + F
Sbjct: 449 SQHSVNVRGEEVEFTPGMSANGEIVTRQKSVLTFIIEPVTRRFSEAF 495


>gi|46202565|ref|ZP_00052986.2| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 547

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 56/435 (12%), Positives = 155/435 (35%), Gaps = 19/435 (4%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R  P + +      I  I+  + W+ L  ++  V++ G ++     + ++   +G+++ 
Sbjct: 125 ERPAPRAAEWSLFAIIAAIVFSVLWASLAEVDRVVTAEGRLITTAGKMVVQPLETGVVRS 184

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            +V+ G  + QG  L T +   T    +  + S+ +L   +   ++ L     +    + 
Sbjct: 185 IRVKVGQPVRQGEVLATLDATFTEADANTSRNSLVSLDAQLLRLEAELSGQMPQSFSPDA 244

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              + +  LL              +  I ++   L   L   +                 
Sbjct: 245 RENALQADLLRRRQAEIKANLAAIDGEIGALSAELNTNLRDQKDA--------------E 290

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L   ++   M + L EK+A S+  L + +  V+ +  ++  + +  + + + +    +
Sbjct: 291 KALRIAREVEDMRRRLVEKDAGSKLQLLEAQNRVFAAERDINHSANTAQQVSQRLAAARE 350

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +     +    + +++++  +R        L   ++     T+ +P+   I+     S  
Sbjct: 351 KRIAYLSETQSKATQEVQSVRRERDKVSEDLKKQDRRSSLVTLTAPVDAVILEVAPRSVG 410

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           + A Q++PL+ ++P          +    +  ++ G +A ++       R    +  ++ 
Sbjct: 411 SVASQAEPLITMIPLDAPLEAEVDIPTLDVALLRTGDSARIKLEALPYQRHGILEGRVDV 470

Query: 370 IDPIISQQDNN---LQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +   + + + +    Q    Y   L +   +L     +  L  G             +  
Sbjct: 471 VSGDVLKAEKSGPMGQQASVYRARLALLTRELRNVPPDFRLIPGMAVTAEIKIGTRRVIT 530

Query: 425 EIIHPITDNWPKIFE 439
             I+P+     + F 
Sbjct: 531 YFIYPLFRALDESFR 545


>gi|118580782|ref|YP_902032.1| HlyD family type I secretion membrane fusion protein [Pelobacter
           propionicus DSM 2379]
 gi|118503492|gb|ABK99974.1| type I secretion membrane fusion protein, HlyD family [Pelobacter
           propionicus DSM 2379]
          Length = 447

 Score =  201 bits (511), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 64/429 (14%), Positives = 144/429 (33%), Gaps = 37/429 (8%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
               +L+    + + R+    ++  ++ LITWSI+  I+I V++SG+I+       I   
Sbjct: 45  PAALSLQEKPVSPVARLLAKVLMALVVVLITWSIVGKIDIIVNASGKIIPSGYTKTIACV 104

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
               ++   V  G Q+  G  L+  + I +    D            +   +S L  ++ 
Sbjct: 105 DVASVRALYVAEGQQVRAGDLLIELDAIASDAERDKAAGDRAVSILQVACARSLLAAIDG 164

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                      R   +            +  +         L     +     + R  L 
Sbjct: 165 GSP-------PRLPPIATVPADQWLAAKQQLDAQYGDYQARL-----KRIDGDIERFSLA 212

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            + +  RA         T  K L +   VS +   ++E+       +L +  +++  ++ 
Sbjct: 213 LQLATQRA---------TDYKALLKDRDVSYHAWLEKEQARVDLAGQLADARNQRNALVA 263

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
               +  E + E +      S   +  +      + KLT            +P++GT+  
Sbjct: 264 ETRRVAHEQSTEGSKTA--ASSQQDAIRAAAHSRLLKLT------------APVSGTVQQ 309

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +       + PLM+IVP      + A +  K +  V++G +A V+   +   +   
Sbjct: 310 LNVHTIGGVVAAASPLMQIVPRESRVEVEAFMENKDVGFVQEGQSAEVKIDAFEYTKYGT 369

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
            K  +  +       +         ++ L  + +      + L  G    V     +  +
Sbjct: 370 IKGRVTHVSRDAIADEKRGLIYS-TKIRLDRSSITVDGREMPLSAGMTVNVEIKTGDRRI 428

Query: 423 AQEIIHPIT 431
            + ++ P+ 
Sbjct: 429 IEYVLSPLL 437


>gi|119510890|ref|ZP_01630013.1| hypothetical protein N9414_20410 [Nodularia spumigena CCY9414]
 gi|119464418|gb|EAW45332.1| hypothetical protein N9414_20410 [Nodularia spumigena CCY9414]
          Length = 517

 Score =  201 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 67/465 (14%), Positives = 151/465 (32%), Gaps = 42/465 (9%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  + L    P    R  L  ++G   L   W+    ++ + S+ G I  +    ++ S 
Sbjct: 47  YGTEELLDALPKVWTRGVLYVLVGFASLALPWATFAKVDETGSARGRIEPQGATQKLDSQ 106

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +K  +V  G  + QG  L+  +       +   +  +  L+      ++  + L +
Sbjct: 107 AQGSVKAVKVTEGDTVTQGQVLVELDSDILQTEVQQAEAKLSALQNQ----ETQFEVLKS 162

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  +     + + +          +   +      ++       +   +  +       E
Sbjct: 163 QLQLTLSIQKQQNQFQALEKMSQVNQAQQNLGLKETTYNLQKLERQALVNQVQQQIQTAE 222

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI--------------VYKSTL 228
           ++       LS   + +   + L    AVS N ++Q ++               V ++ L
Sbjct: 223 DEQVSAEGRLSIDSRQVNRFQQLVNDGAVSANQVDQLKKEEQDSKRLYARAKSDVKQAKL 282

Query: 229 ELRENIHEQKNMLRHINELYDEAN---------------------LEFANYLKEISRDLE 267
            L E     +  +  +     +A                      L++   LKE+ R + 
Sbjct: 283 RLAEETSRYEATMNQLQSDIKQAKHQLQAEKNSYQSLLQAGKLAVLKYQEQLKELERQVA 342

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +   A   SK+T L+   +Q+ + SP+ GTI            Q  Q +  I P +  
Sbjct: 343 NLKAEIAQTKSKITSLKLQMQQRVVRSPVDGTIFDLPVTKPGEVVQVGQRIADIAPENTK 402

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++A +  +    +  G    ++F  +        +  + +I P            E Y
Sbjct: 403 IVLKANMPIQDSGFLNVGMPVKIKFDAFPFQEYGIIQGKVSRISPDSKTTQTPAGNIETY 462

Query: 388 EVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           E+ + +      +    I L  G  A      +   +   ++ P 
Sbjct: 463 ELEITLEQQYIHNGATRIPLTPGQTANAEVIVRQRRVIDFVLDPF 507


>gi|209543605|ref|YP_002275834.1| HlyD family type I secretion membrane fusion protein
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531282|gb|ACI51219.1| type I secretion membrane fusion protein, HlyD family
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 488

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 73/458 (15%), Positives = 149/458 (32%), Gaps = 40/458 (8%)

Query: 3   HFMWKNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H     L    P    + ++ L        I +  + P+   VS++G+I++    + ++ 
Sbjct: 44  HSPTTALVNMPPTPAAQYISWLIGALTASSIVFMAVFPLNRVVSTTGKIISTQQPLVVQP 103

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + II    V  G  + +G  L+  +       I+  +   ++    +    +     +
Sbjct: 104 FETSIIHSIDVHEGDLVHKGQVLVRLDPTVNDADIEDLRSQTQSYGAEVARLSAEAQGRD 163

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            K D    A   + E  L    ++ +  +  +   I+S    L+  L     +Y  R+ +
Sbjct: 164 YKPDRDNPASTQQAETFLRRKAEFDAKIAN-YQEQIASQTADLQGDLANA-DMYAARVKV 221

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            N    +RA L + Q    +          +QNDL +  R    +        H+  ++ 
Sbjct: 222 ANDVRAMRARLQADQVGSRLST------LSAQNDLMEVTRSEILAQ-------HDGASVR 268

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             +  L  E       +  +I  DL   Q   +   S     +  +    + +     ++
Sbjct: 269 SKLQALVAERQGYIETWKADIYHDLSDAQHKLSTADSDYQKAKLRKSMTVLKAQNDAIVL 328

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                S+ +       LM +VP      +   ++ K    V+ G  A ++F  +   +  
Sbjct: 329 TIAKLSTGSVLTTGSELMTLVPIDSGLEVETHLSGKDAGFVQPGNKALLKFATFPYSQYG 388

Query: 362 KFKAIIEKIDPIISQ------------------QDNNLQTQEYYEVILKITDLAFSDNN- 402
             +A + +I                         D     Q YY V L+I          
Sbjct: 389 GAEATVREISADTFDGQTGQGPSSSAERAAAQSNDPADAAQSYYRVRLRIERYTLHGVPS 448

Query: 403 -IELRNGFPAEVLFTAKNTTLAQEIIH---P-ITDNWP 435
               R G P          T+ + +++   P ITD   
Sbjct: 449 FFHPRPGMPVTADIQVGKRTIMRFLLNSIMPLITDGMR 486


>gi|298490128|ref|YP_003720305.1| secretion protein HlyD family protein ['Nostoc azollae' 0708]
 gi|298232046|gb|ADI63182.1| secretion protein HlyD family protein ['Nostoc azollae' 0708]
          Length = 508

 Score =  201 bits (510), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 73/465 (15%), Positives = 169/465 (36%), Gaps = 42/465 (9%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  + L    P +  R  L  +I   +  + W +   ++ + ++SG I  + +  ++ S 
Sbjct: 38  YGTEELLDALPKAWTRSMLYLLISFTVVALPWVMFTKVDETGNASGRIEPKGSTQKLDSV 97

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G +    V+ G+ +  G  L+  E       I   +  ++ L       +  L+ L N
Sbjct: 98  VTGSVIAVNVKEGTNVKAGQVLVEIESEVLRTEIQQSQAKLEGLVNR----QGQLELLKN 153

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  ++    E + +          +   +  +   S+ +     KL ++  +  N    +
Sbjct: 154 QVLLVINIQERQNQSQTLEKLAQLNQARQNLDAKQSAYHLQKLEKLAQIDKVEQNINSTQ 213

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI--------------VYKSTL 228
               L +  LS    ++   + L ++ A+ +  + + E+               + +S L
Sbjct: 214 ISHRLAKRRLSRDLLEVKRYRLLLQEGAIPETRVVEVEKTAEDSERLQEEAKANIQQSEL 273

Query: 229 ELRENIHEQKNMLRHINELYDEAN---------------------LEFANYLKEISRDLE 267
            L+E +    +++       ++A                      L+     K++   + 
Sbjct: 274 HLQEELSRYNSIMSQAQSDIEQAKFRLQEEENSYGSVVQAGKLTLLKSQEQYKDLQTQIT 333

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +   +   S++T L+   +Q+ + SPI GTI         +  Q  Q + +I P    
Sbjct: 334 SLKSEISQTKSQITSLQLQLQQRVVRSPIDGTIFELPIKKPGSVVQPGQMIAQIAPKGAA 393

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++A++  +Q   VK+G    ++F  Y        +  +  I P    Q+N+   QE Y
Sbjct: 394 LILKAEMPSRQSGFVKEGMPVKIKFDAYPFQEYGVMQGYVTSISPDSKIQENSPTRQETY 453

Query: 388 EVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           ++ + +        +  I L  G  A      +   +   I+ P 
Sbjct: 454 QLEIALDQPYIQTGNKRIPLTPGQTATAEVIVRQRRVIDFILDPF 498


>gi|209545001|ref|YP_002277230.1| HlyD family type I secretion membrane fusion protein
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209532678|gb|ACI52615.1| type I secretion membrane fusion protein, HlyD family
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 479

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 67/449 (14%), Positives = 145/449 (32%), Gaps = 44/449 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            +PA+L    L+S + I G++  S+  P++  VS+ G + + D  + ++   + II+   
Sbjct: 48  PNPAALYITWLISTLAIAGIVVMSV-CPLDQVVSAQGRLTSTDTTLVVQPLETAIIRSID 106

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLE 128
           V+ G  + +G  L   +   T   ++  +            +  E    D++ +  D   
Sbjct: 107 VQEGDVVHRGQVLAHLDPTVTDADVENMRQQQAAYAAQVARLTAEAEGRDYIPDPAD--- 163

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                +E           +   + F+   +     ++  L    ++Y  R  +      +
Sbjct: 164 -PASVQEAAAFQRRRAEFTAKVENFDKQAAGARSDMQGSLADA-AMYGARARVAANVHAM 221

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L   Q+D    +        +QNDL + ER    +         + + +    +   
Sbjct: 222 RLRL---QRDQVGSRL---STLSAQNDLMEVERAQIAAQQAAGSARAKLEGVTAARDGFI 275

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                   N+   + +DL   Q   AD           R    + +     ++   S S 
Sbjct: 276 Q-------NWKATVYQDLATAQHRLADAGDDYRKAGLRRSLIVMRADRDAVVLNIASLSV 328

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +  Q    LM +VP      +   V    +  ++ G    ++F  +   +    +  + 
Sbjct: 329 GSVMQSGNQLMTLVPVDGGLEVETAVRGSDVGFIRPGDPVLLKFATFPYTQYGGAEGTVR 388

Query: 369 KIDPIIS----------------QQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFP 410
            I                      + +    + YY V +++                G P
Sbjct: 389 IISADSFAPGDGGHAAPGTGAQVPRPDAGGMEAYYRVRVRVDRYTLHGVPSFFHPHPGMP 448

Query: 411 AEVLFTAKNTTLAQEIIH---P-ITDNWP 435
            E        T+ Q +++   P +TD   
Sbjct: 449 VEADIHVGRRTMMQYLLNRLVPTLTDGMR 477


>gi|161505277|ref|YP_001572389.1| hypothetical protein SARI_03418 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866624|gb|ABX23247.1| hypothetical protein SARI_03418 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 425

 Score =  200 bits (509), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 69/406 (16%), Positives = 147/406 (36%), Gaps = 20/406 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + I   V   G I  +DN   I     G I+   V  G  + +G  L    +++    
Sbjct: 25  YFVKINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVTEGDTVKKGELLAKIVNLD---- 80

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                     L+      K+   +L+   + +    + R E  L  L    S  +K    
Sbjct: 81  ----------LQKEYQRYKTQKGYLDKDVNEISFILDKRNEDGLISLDGVSSLSNKEVKA 130

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            I  V+  ++ K  +  S+      L+ K +     L+   +++ ++  L +K      +
Sbjct: 131 NIELVHSQIRTKELKKNSLDSEIDGLQEKLNSKENELALLAEEINILSPLVKKGISPYTN 190

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              +++   K   E+ +           I  + ++           +S+ + +NQ+    
Sbjct: 191 FLNKKQAYIKVKSEINDIESSITLKKDDIELVANDIKALNNELRLSLSKLISKNQQELEV 250

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQ--SFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
             S L ++EK  +++ I SP+ G I      + +     Q +  L +I P  K      K
Sbjct: 251 VNSTLKVIEKQLDEEDIYSPVDGVIYKINKSATTHGGVIQAADLLFEIKPKVKTMLADVK 310

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           + PK    +       +        + K + A I+ I P   +++     Q YY+VI+  
Sbjct: 311 IPPKYRDQIYLDEAVKLDVQSIIQPKMKSYSATIDNISPDSYEENTGGTIQRYYKVIISF 370

Query: 394 TDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                +++++  L+ G   +        ++ + ++ P+     K F
Sbjct: 371 D---VNEDDLRWLKPGMTVDASIITGKHSIMEYLLSPLMKGVDKAF 413


>gi|239904860|ref|YP_002951598.1| HlyD family secretion protein [Desulfovibrio magneticus RS-1]
 gi|239794723|dbj|BAH73712.1| HlyD family secretion protein [Desulfovibrio magneticus RS-1]
          Length = 483

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 49/399 (12%), Positives = 139/399 (34%), Gaps = 11/399 (2%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            ++  V + G++++    + +    +  +++  V  G  + +G  L+  +       +  
Sbjct: 88  EVDRIVVAPGKLVSARKNITVAPLETATVREVYVSAGKSVTRGDALIALDPAFAEAGLAE 147

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           +      L   +   +  +  L  +      +     E  L+           V N    
Sbjct: 148 RDKDRAALSAKVWRLRCEVSGLCAQPPDAPPSAAPPAELALE---------RDVLNARRR 198

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                +     R R +         +++  +  ++  +    M  +++ + A S+ +  +
Sbjct: 199 EFAAKVDALTQRQRELSAKLTTNAAEAAKHKKQIALAKDLERMYGDIYSQGASSKVEYMK 258

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +    ++  +L    +E   +   +     E      N+    +++L    R  +    
Sbjct: 259 AQSSRIEAEGQLARLQNEAGELRESLARAEAEKRDFVENWKAGAAKELADASRELSGAEE 318

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +    E+ R+   + +P +GT++   + S+   AQ  + L+ IVP  +   + A+   + 
Sbjct: 319 RQKKAERLRDLVVLRAPESGTVLDVAARSAGAVAQAGETLLTIVPAGEELVVEAEAAAQD 378

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  ++ G    V+F  +   R    +A +  I P   ++      + +Y V   +  +  
Sbjct: 379 IGLLRPGDPVRVKFEAFPYQRHGVAEARLATISPDALEKTTPEGQRLFYRVRATLGAVRL 438

Query: 399 S--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
           +    +  L  G          +  +   +++P+   + 
Sbjct: 439 TAVPPDFRLIPGLSLTAEIRVGSRRIITYLLYPLLKTFD 477


>gi|10952796|gb|AAG25078.1| transporter component RzcD [Rhizobium leguminosarum bv. viciae]
          Length = 393

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 64/362 (17%), Positives = 125/362 (34%), Gaps = 4/362 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+         +     +   G + WS +   +I  ++ G+I     V  I+S   G   
Sbjct: 32  LETPASPIRTALIWFICLFTAGALIWSYIGTFDIVATAQGKIQPTGRVKVIQSIEVGKTI 91

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V NG+++  G  L+  +  E    ++    S+  LR  +    +AL  +N       
Sbjct: 92  AVPVSNGAKVETGDILVELDPTEARVEVNTLTTSLAALRAEVARRGAALAEVNAWQRGDL 151

Query: 129 KAFESREEQLLDF----LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +   R E + +F      +  +    ++   +  +  +L     +    +         
Sbjct: 152 WSGTRRIEIVPEFADSIPAEIRTREELLYTSDLEQLASTLDSLAAQRNQQFAAVKRYTEM 211

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  RAL+++    + M  NL + +A S++ +     I  K    L E I ++      I
Sbjct: 212 VTAQRALVATLADRVAMRSNLVDLSAGSRSGVIDAVEIRQKEEATLAEQIGQRAEAETAI 271

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                E       ++ + +       R   ++  +L    K  E  TI SPI G +  + 
Sbjct: 272 VTAASEGLKAIKTFVADNAEKQAAASREIDEKEQQLVKAAKRLESMTIKSPINGIVQTSA 331

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +          LM+IVP      I A +  + I  V  G  A ++   +   R     
Sbjct: 332 ITTVGQVVTAGAELMRIVPDDASLEIEAYLPNRDIGFVSPGQPAVIKVEAFPFTRYGILN 391

Query: 365 AI 366
             
Sbjct: 392 GT 393


>gi|254417320|ref|ZP_05031063.1| auxiliary transport protein, MFP family [Microcoleus chthonoplastes
           PCC 7420]
 gi|196175858|gb|EDX70879.1| auxiliary transport protein, MFP family [Microcoleus chthonoplastes
           PCC 7420]
          Length = 513

 Score =  199 bits (507), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 71/455 (15%), Positives = 165/455 (36%), Gaps = 56/455 (12%)

Query: 17  LKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             RM +++IIG+  L +TW+ L  IE ++ + G++  +  V E+++P  G++K  +VE G
Sbjct: 51  WPRMIVVAIIGVTTLSVTWACLAKIEEAIPAQGKLEPKAAVKEVQAPQGGVVKSVEVEEG 110

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS-------------------- 115
            ++ +G  LLTF+             S++ +R  +  E                      
Sbjct: 111 DRVEKGDTLLTFDQTAAQAQFK----SLQQIRAALIQENQFYQAQMTGKAVPIDPENLPE 166

Query: 116 ----ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                +  L      L       + QL            +      +     +      +
Sbjct: 167 KLPPQIASLTKNRAALVAEKNFYQAQLTGNPTGLTLAQRQRLQASQNEYNSRVAAADLEV 226

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
             +       + + +    +L+ +Q+    ++ L+ + A  +    +Q++    S  E+ 
Sbjct: 227 EQLNRQLTQTQIQLADAEQVLAFNQQITDRLEKLWREGAFGELQYLRQKQDTDSSAAEVA 286

Query: 232 ENIHEQKNMLRHINELYD------------------EANLEFANYLKEISRDLEQNQRTF 273
               EQ+ + + I +  +                  +     A    ++++ + +NQ+  
Sbjct: 287 RLRQEQERLEKAIQQAQERKQNTMALSEEELRTLIAQNEQRIAEIDSQLTKIIVENQKRL 346

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +  S+L+ ++ T   + + +P  G +   Q+ S    A  S+P++KIVP +     +  
Sbjct: 347 QEIESQLSQIQVTLTNQELQAPEGGIVFDLQA-SPEFVANTSEPVLKIVP-NDTLVAKVY 404

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE----V 389
           +T + I  V +G    VR   +        K  + +I           +   +Y     +
Sbjct: 405 ITNQDIGFVNEGMPVDVRVDSFPYSEFGDVKGELVQIGSDA---LPPNEVYPFYRFPAEI 461

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
            +    ++ +   I L++G         +   +  
Sbjct: 462 RMDRQTISVNGKEIPLQSGMSISANIKVRKRPVIS 496


>gi|296114498|ref|ZP_06833151.1| type I secretion membrane fusion protein, HlyD family
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295978854|gb|EFG85579.1| type I secretion membrane fusion protein, HlyD family
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 496

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 63/435 (14%), Positives = 143/435 (32%), Gaps = 41/435 (9%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A+L  + ++  + I GL+     LP++  V ++G ++  D  + ++   + II+   V  
Sbjct: 67  AALYIIWVIGGLAIAGLLV-MTFLPLDRVVMTNGRLVAADGTLVVQPLETSIIRSIDVHE 125

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAF 131
           G  + +G  L   +   +   ++  +    + R     +  E +  D++ +  D      
Sbjct: 126 GDIVHKGDVLAQLDPTISDADVENMRKQAASYRAEVARLTAEAAGHDYVPDMSD------ 179

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +  ++  DF+ +     +KV NY              ++  +  +    E  +++  A 
Sbjct: 180 PASIQEAADFMRRRSEYSAKVANYDR------------QIVGLQSDLQGYEASTAMYAAR 227

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                    M   L  +   S+      +  + +         H+       ++ +  + 
Sbjct: 228 AKVASDVRDMRVRLQHEQVGSRLSTLASQDSLMEVVRSQITARHDADATRARLDAMKAQR 287

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           +    N+   I +DL   Q   AD  S             + +     ++     S+ + 
Sbjct: 288 DGYIGNWQATIYQDLSVAQHHLADADSSYRKAMLHHTLVQMRAEKDAVVLSIARLSTGSV 347

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q + PLM +VP      + + +    + +V+ G  A ++F  +   +     A +  I 
Sbjct: 348 LQAASPLMTLVPVDGRLEVESVMRGLDVGYVRPGDRALLKFSAFPYTQYGGADATVRVIS 407

Query: 372 PII-----------------SQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAE 412
                               +          YY V L I              + G P E
Sbjct: 408 ADSFVGGGNSAGGMTAQEGGAPDVTGDPQSAYYRVRLAIDRYTLHGVPPFFRPQPGMPVE 467

Query: 413 VLFTAKNTTLAQEII 427
                   T+ Q ++
Sbjct: 468 ADIHVGRRTIMQYLL 482


>gi|126725508|ref|ZP_01741350.1| probable alkaline protease secretion protein [Rhodobacterales
           bacterium HTCC2150]
 gi|126704712|gb|EBA03803.1| probable alkaline protease secretion protein [Rhodobacterales
           bacterium HTCC2150]
          Length = 422

 Score =  199 bits (506), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 80/435 (18%), Positives = 154/435 (35%), Gaps = 24/435 (5%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            L R   A L+   L  II + G   WS L PI  ++  SG +++     +I+ PF G++
Sbjct: 3   ELPRQIFAPLRMAALAVIIFLGGAGLWSALAPIATTLRISGTLVSTKPSFDIQHPFGGLV 62

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V     +  G  LL  +    T+  D    +I+    +++ E   +  +++     
Sbjct: 63  TDVLVSLHQSVEVGETLLILD----TETQDKTLKTIREQIAYLEAENEIITSISSD---- 114

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E+        +LD    ++   S V    +S+   +++ K      + +       +  L
Sbjct: 115 EQKATGNPPSVLDV---FYQERSAVLALRLSTKSNAIEAKKESAHHLSV-------QMDL 164

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           ++  +    +     K L ++  +S+ +L+  +  +      L +       +   I  +
Sbjct: 165 VKERILLLAERSNKQKELSQRGFLSKAELDSSKGQILALEGALEDQSARLAAINSEIRAM 224

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E     A     +S     N +       +   LE+      I +P+ G I      +
Sbjct: 225 NLELKSMVAEDRLSLSEKAANNLKNLPQLKIQAFKLEQEINAARINAPVDGQITIQNVIA 284

Query: 308 SSNYAQQSQPLMKI-VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
               AQ  Q LM + +P  +   +  K+    I  V  G T  +     +       +  
Sbjct: 285 PGMVAQAGQTLMTLSLPLFEP-KVTLKIPVANIDQVAIGQTGKLTLTPLSQRDAPDIEVT 343

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFTAKNTTL 422
           + KI P  +            E  L  +DL  +  N+     L    P  V    ++TT 
Sbjct: 344 VIKIAPQATLDPEQNPLFYLAEARLDESDLEVARQNLGERFRLATDMPVSVAVKGRDTTF 403

Query: 423 AQEIIHPITDNWPKI 437
           AQ +  P TD +   
Sbjct: 404 AQFLFKPFTDIFSTA 418


>gi|84385854|ref|ZP_00988884.1| hypothetical protein V12B01_12545 [Vibrio splendidus 12B01]
 gi|84379170|gb|EAP96023.1| hypothetical protein V12B01_12545 [Vibrio splendidus 12B01]
          Length = 449

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 64/426 (15%), Positives = 144/426 (33%), Gaps = 17/426 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            S+ +  L+  +  +  I  +    I+I VS  GE+L E +V +++    GI+++  V  
Sbjct: 36  TSVHKTLLIIFLLALVAIAVASQARIDIVVSVRGELLLESDVEKVQHLEGGILEEMLVRK 95

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G P+     ++    +D     I  +       +S  D +   +    + F  +
Sbjct: 96  GEVVYEGQPIARIRSLDRNTQLDTVNTEIIQIELDKIRYESLRDMVEPNFASYIEKFPEQ 155

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            +  ++   +  S            +   +K K + ++S+   R   EN+ SL+R  L+ 
Sbjct: 156 VQVNMNTWRQEFSKN----RSNEELITHDIKHKNSLIKSMLKRRKSSENQLSLIRKQLNI 211

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
                     L+++   S  D+   +        E+        N    +++L  +    
Sbjct: 212 KN-------TLYKEEMASYVDVLNMKVQESNMVREIENLDESVMNERFQLDKLEKQHRDL 264

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N   E    + Q  +    +           ++  + SP+ G +        S     
Sbjct: 265 VENRNSEYQAQIIQANKDLKLKRILQPQHSDKVDRLVVYSPVDGVVDKLHFNFRSAVIPP 324

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + +  I P +   +  AK+  K +  V+ G    V+   Y   +    +  I  I    
Sbjct: 325 GESIADIAPINNSLHGEAKIPRKDMGFVEIGQAVKVKMDTYNFAKYGFVEGTIASISRSS 384

Query: 375 SQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            ++++      +Y   ++I    L       +L             +  + +    P+  
Sbjct: 385 YEEEDAE----FYLAEIEIDRNFLERGGTQYKLSPYMEFTADVKTGSRRVIEYAAKPVMS 440

Query: 433 NWPKIF 438
                F
Sbjct: 441 AIEDAF 446


>gi|186681343|ref|YP_001864539.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186463795|gb|ACC79596.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 493

 Score =  199 bits (506), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 73/467 (15%), Positives = 159/467 (34%), Gaps = 38/467 (8%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K ++   P   + +     + + G I W+    I+   ++ GE++    V  + S   G 
Sbjct: 27  KAVQELPPLYTRLLAGTMSVIVFGAIAWAYFSQIDEVATAPGELIASTQVRPVTSLGGGS 86

Query: 67  IKKFQVENGSQILQGTPLLTFE-DIETTDLIDLKKVS--IKNLRCHIDTEKSALDFLNNK 123
           I   +V+ G ++ +G  L+  + D++ TD+  L K +  I++    +D E+        K
Sbjct: 87  IVGVKVQEGDRVTKGQILIQKDPDLQITDVSRLAKSTRLIQDDLQRLDAERLGGKTTGTK 146

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL----NRL 179
                     ++ Q      +  +                L+  L   +S +     N  
Sbjct: 147 LQDELLTSRLQDYQARQAGAEAEANRQIALINQAKVRLTRLQDNLANAKSSFANAKTNLA 206

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           + ++    + + L+  Q+    ++ L    AV + D    +  + ++  E+  +  E  N
Sbjct: 207 NADSIRIKIESNLALAQEREKSLRTLITPGAVPRVDYLDAQERLTRAKTEITRSQDEVTN 266

Query: 240 MLRHINELYD----------------------------EANLEFANYLKEISRDLEQNQR 271
               I E  D                            +A    +    EI     + + 
Sbjct: 267 AQNRITEAQDKVTSLEKDIAAQAQEIHQAEQAYKAARSQAQRIASERQSEILTQFNKRKE 326

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                  +L    K +  +TI +P+AGTI   +  ++    Q  + L+ I+P  +   + 
Sbjct: 327 ELTTVQGQLEQARKQQALETIEAPVAGTIY--RVKATKGPVQSGEELLSILPEGEEMLLE 384

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            KV  + I  +++G  A V+   +           + ++ P                + L
Sbjct: 385 VKVLNRDIGFIRQGMKAKVKMATFPFQEFGVVDGEVMQVSPNAIIDKELGLVFP-TRIKL 443

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               +      +E   G  A      +  ++   I  P+T  + + F
Sbjct: 444 NKHSVNVRGQEVEFTPGMSATGEIVTRKKSILTFITEPVTRRFNEAF 490


>gi|282901546|ref|ZP_06309468.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
 gi|281193589|gb|EFA68564.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
          Length = 498

 Score =  199 bits (506), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 73/467 (15%), Positives = 171/467 (36%), Gaps = 38/467 (8%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K ++   P   + +       +   I W+ L  ++   +++GE++    +  + S  +G 
Sbjct: 32  KAVQELPPIYTRLLAGTISAIVFSSILWAHLSQVDEVATATGELIASTQIRPVTSLGNGS 91

Query: 67  IKKFQVENGSQILQGTPLLTFE-DIETTDLIDLKKVS--IKNLRCHIDTEKSALDFLNN- 122
           I   +V+ G ++ +   L+    D + TD+  L K S  I+     ++TE++        
Sbjct: 92  ILAVKVKEGDRVNKDQVLIERNPDFQQTDINRLTKASKLIEEDLQRLETERTGAKTTGTK 151

Query: 123 -KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRL 179
            + ++L       + + +    +     + +      +S +  +L      + +   N +
Sbjct: 152 LQDELLNSRLSDYKAKQMSAEAEAKRQLANIQQAKIRLSRLQENLANSKPGVVNSQNNLV 211

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-QER----------------- 221
           + EN  + +++ L         ++ L    AV + D  +  ER                 
Sbjct: 212 NAENIRNQIQSNLKIATTREENLRTLLTPGAVPRVDYLEALERVNRANTDIIRAVNEVNN 271

Query: 222 ------IVYKSTLELRENIHEQKNMLRHINELYDEANLE----FANYLKEISRDLEQNQR 271
                         L ++I  QK  +    + Y  A  +     +    EI   + + + 
Sbjct: 272 AKNRLLEAQDRVTSLEKDIAAQKQEINQAQQTYQSAKSQSLRLTSERQSEILTQINKRRE 331

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
              + + +L   +K RE++ I +P++G I   +  ++    Q  + L+ I+P  +   + 
Sbjct: 332 EMTNIVGQLDQAKKQREKEIIKAPVSGIIYKIK--ATKGPVQSGEELLSILPEGEDILLE 389

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            KV  + I  +++G +A V+   +         A + +I P     +          + L
Sbjct: 390 VKVLNRDIGFIRQGMSAKVKLATFPFQEFGVVDAEVLQISPNAVVDEKLGLVFP-TRIRL 448

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               +      +E   G  A      +  ++   I+ PIT  + + F
Sbjct: 449 NKHSITMDGQEVEFTPGMMANAEIVTRKKSILTFIVEPITRRFNEAF 495


>gi|17232796|ref|NP_489344.1| hypothetical protein all5304 [Nostoc sp. PCC 7120]
 gi|17134443|dbj|BAB77003.1| all5304 [Nostoc sp. PCC 7120]
          Length = 498

 Score =  199 bits (505), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 69/467 (14%), Positives = 155/467 (33%), Gaps = 38/467 (8%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K +K   P   + +     + + G I W+ L  I+    + GE++    V  + S   G 
Sbjct: 32  KAVKELPPLYTRLLAGTISLVVFGTIAWAALSEIDEVAVAQGELIASAQVRPVTSLGDGT 91

Query: 67  IKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           IK  QV+ G ++ +   L+  +                L +  I+ L+      +S    
Sbjct: 92  IKAIQVKEGDRVTKDQVLIQRDPDLKQTDVTRLAQSTKLIQQDIQRLQAERIGGQSTGTV 151

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           + ++            +   +       +        +  +  +L    T + +   N  
Sbjct: 152 IQDELLKSRLRDYQARQGAAEAEASRQRSLIDQARVRLIRLQDNLVNARTSVANAKTNLF 211

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           +  + SS +   L   Q     ++ L    AV + D  +    + ++  ++     E  N
Sbjct: 212 NARSISSKVEENLEIAQSREKNLRTLITPGAVPRVDYLEARERLTRAQTDITRAQDEVIN 271

Query: 240 MLRHINELYDEANL----------------------------EFANYLKEISRDLEQNQR 271
               + E  D+                                 +    EI  ++ + + 
Sbjct: 272 AQNRLTEAEDKVTSLEKDISAQDQEIRQAQQAYQAARNQAQRVVSERQSEILTEMNKRKE 331

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
              +   +L   +K  + +TI +P+AGTI   +  ++    Q  + L+ I+P  +   + 
Sbjct: 332 ELTNVAGQLEQAKKQTDGETIKAPVAGTIYKIK--ATKGPVQSGEELLSILPEGEEMLLE 389

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            KV  + I  ++KG  A V+   +        +  + ++ P  +             + L
Sbjct: 390 VKVLNRDIGFIRKGMRAKVKMATFPFQEFGTIEGEVVQVSPNATVDKELGLVFP-TRIKL 448

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               +     N+    G  A      +  ++   I+ P+T  + + F
Sbjct: 449 NQHFVNVRGQNVTFTPGMAASGEIVTRKKSILTFIMEPVTRRFSEAF 495


>gi|330991079|ref|ZP_08315033.1| Protein CyaD [Gluconacetobacter sp. SXCC-1]
 gi|329761900|gb|EGG78390.1| Protein CyaD [Gluconacetobacter sp. SXCC-1]
          Length = 484

 Score =  199 bits (505), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 67/437 (15%), Positives = 141/437 (32%), Gaps = 31/437 (7%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
             L    P+   R  +  +  + G+        P++  VS +G +   D  + ++   + 
Sbjct: 49  AALVELPPSDAARYVIWLVAALAGMGLAVMTFFPLDRVVSVNGRLTPFDETMVLQPLETS 108

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           II+  +V  G  + +G  L   +   T   ++  +  +   R  +    +         D
Sbjct: 109 IIRSIEVHEGDTVHKGQILARLDPTMTDADVNNLRRQVTAYRAEVARRTAEAAGRPYVAD 168

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V + A        L    +Y        N  +SS  R +    + ++         E  +
Sbjct: 169 VSDPASVQEAAAYLRRQAEY--------NAQMSSYDRQVAGLQSELQ-------GYEASA 213

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           ++  A          M   L  +   S+      +  + + T       HE  +    ++
Sbjct: 214 AMYAARARVAHDVQDMRLQLQHEQVGSRLSTLAAQDTLMEVTRSQVAARHEADSTRARLD 273

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            +  + +   +N+   + +DL   Q   AD     +      E   + +    T++    
Sbjct: 274 AMKAQRDGYASNWHATVYQDLALAQHRLADADGSYSKAILQHELIIMRADRDATVLSIAH 333

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            S+ +  Q + PL+ +VP      + A +      +V+ G  A ++F  +   +    +A
Sbjct: 334 LSAGSVIQAASPLLTLVPAGSHLDMEATLRGVDAGYVRAGDHALLKFAAFPYTQYGGAEA 393

Query: 366 IIEKIDPIISQQDNNLQT-------------QEYYEVILKITDLAFSDNN--IELRNGFP 410
            +  I P    Q  +                  YY V L I              + G P
Sbjct: 394 SVRVISPDSFAQPGDGPGGGAQQGSAPGDSMNAYYRVRLSIDRYTLHGVPAFFHPQPGMP 453

Query: 411 AEVLFTAKNTTLAQEII 427
            E        T+ Q ++
Sbjct: 454 VEADIHVGRRTVMQYLL 470


>gi|170737364|ref|YP_001778624.1| HlyD family type I secretion membrane fusion protein [Burkholderia
           cenocepacia MC0-3]
 gi|169819552|gb|ACA94134.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           cenocepacia MC0-3]
          Length = 447

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 66/421 (15%), Positives = 135/421 (32%), Gaps = 41/421 (9%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           PA      +L+++ +   I WS    I+I V   G+I+       + +     ++   V 
Sbjct: 57  PAGRWVARILTLL-VTTAILWSYFGKIDIVVDGGGKIIPSVRTKTLAAVEVASVRALHVR 115

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +G  +  G  L+  +        + ++ +   L   +  E++          +++     
Sbjct: 116 DGQIVKTGDALIDLDTRVIDA--ERQRANGDRLNAVLQVERARA--------LIDAIDTG 165

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  +L D  G       +V  +            L + R     R  L+++         
Sbjct: 166 RPPRLADVEGVSPERRREVERH-----------LLDQWRDFVARRDRLDSEVHRYGQAAP 214

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              +       L     V+++   + E+       +L +  H++  ++        +A  
Sbjct: 215 LAARRADDYARLMRTGDVAEHAWIEAEQQRIDMAGQLADARHQRAALVAETRRNIQDA-- 272

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                       L   QR        +   E   E   + +PI GT+      +      
Sbjct: 273 ------------LNDAQRIVDASSGDMRRAEAHGELLRLTAPIDGTVQQLAVHTIGTAVP 320

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            +QPLM+IVP      + A V  + I  VK+G  A+V+   +   +     AI+  +   
Sbjct: 321 AAQPLMQIVPREGAVEMEAFVDNRDIGFVKEGQVASVKIDAFEYTKYGTVSAIVSHVSRD 380

Query: 374 ISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               D        Y V + +   A       I L  G             + + ++ P+ 
Sbjct: 381 AIDDDKKGLV---YSVRIMLDRSALVVDGREIALSPGMSGSAEIRTGTRRVIEYVLSPLL 437

Query: 432 D 432
            
Sbjct: 438 Q 438


>gi|172064166|ref|YP_001811817.1| HlyD family type I secretion membrane fusion protein [Burkholderia
           ambifaria MC40-6]
 gi|171996683|gb|ACB67601.1| type I secretion membrane fusion protein, HlyD family [Burkholderia
           ambifaria MC40-6]
          Length = 447

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 61/417 (14%), Positives = 134/417 (32%), Gaps = 40/417 (9%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  + I+ ++  I WS    I+I V   G+I+       + +     ++   V +G  
Sbjct: 60  RWVARILILLVMTAIVWSYFGKIDIVVDGGGKIIPSSRTKTLAAVEVASVRALHVRDGQI 119

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+  +        + ++     L   +  E++          +++     R+ +
Sbjct: 120 VKTGDALIDLDTRVIDA--ERQRADGDRLNAVLQVERARA--------LIDAIDTGRQPR 169

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L D  G       +V  +            L + R     R  L+++            +
Sbjct: 170 LADVEGVSPERRREVERH-----------LLDQWRDFVARRDRLDSEIHRYGQAAPLAAR 218

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                  L +   V+++   + E+    +  +L +  H++  ++        +A      
Sbjct: 219 RADDYAKLMKTRDVAEHAWIEAEQQRIDTAGQLADARHQRAALVAETRRNAQDA------ 272

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                   L   QR        +   E   E   + +PI GT+      +       +QP
Sbjct: 273 --------LNDAQRIVDASSGDMRRAEAHGELLRLTAPIDGTVQQLAVHTIGTAVPAAQP 324

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM+IVP      + A V  + I  VK+G  A+V+   +   +     A +  +       
Sbjct: 325 LMQIVPREGAVEMEAFVDNRDIGFVKEGQAASVKIDAFEYTKYGTLSATVRHVSRDAIDD 384

Query: 378 DNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           +        Y V + +           I L  G             + + ++ P+  
Sbjct: 385 EKKGLV---YSVRIMLDRSTLVVDGREIALSPGMSGSAEIRTGTRRVIEYVLSPLLQ 438


>gi|269963632|ref|ZP_06177955.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831645|gb|EEZ85781.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 449

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 62/426 (14%), Positives = 143/426 (33%), Gaps = 17/426 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            S+ +  L+  +  +  I  +    I+I VS  GE+L E +V +++    GI+++  V  
Sbjct: 36  TSVHKTLLVIFLLSMVAIAVASQARIDIVVSVRGELLLESDVEKVQHLEGGILEEMLVRK 95

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G P+     ++    +D     I      ++ +K   + L +  +    A+  +
Sbjct: 96  GEVVYEGQPIARIRSLDRNTQLDTVNTEI----IQLELDKLRYESLRDMVEPDFSAYIEK 151

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             +L+                    +   +  K + + S+   R   EN+ SL+R  L+ 
Sbjct: 152 YPELVQVNMNTWQQEFSKNRSNEELITHDINHKNSLIDSMLKRRKSSENQLSLIRKQLNI 211

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
                     L+++   S  D+   +        E+        N    +++L  +    
Sbjct: 212 KN-------TLYKEEMASYVDVLNMQVQESNMVREIENLDESVMNERFQLDKLEKQYRDL 264

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N   E    + Q ++    +           ++  + +PI G +        S     
Sbjct: 265 VENRNSEYQAQIIQAKKDLKLKRILRPQHSDKVDRLVVYAPIDGVVDKVHFNFRSAVIPP 324

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + +  I P +   +  AK+  K +  V+ G    V+   Y   +    +  I  I    
Sbjct: 325 GESIADIAPINNSLHGEAKIPRKDMGFVEIGQAVKVKMDTYNFAKYGFLEGRIASISRSS 384

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            ++++      +Y   ++I+           +L             +  + +    P+  
Sbjct: 385 YEEEDAE----FYLAEIQISQNYLERGGTQFKLSPYMEFTADVKTGSRRVIEYAAKPVMS 440

Query: 433 NWPKIF 438
                F
Sbjct: 441 AIEDAF 446


>gi|302875674|ref|YP_003844307.1| secretion protein HlyD family protein [Clostridium cellulovorans
           743B]
 gi|307688112|ref|ZP_07630558.1| secretion protein HlyD family protein [Clostridium cellulovorans
           743B]
 gi|302578531|gb|ADL52543.1| secretion protein HlyD family protein [Clostridium cellulovorans
           743B]
          Length = 424

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 54/407 (13%), Positives = 138/407 (33%), Gaps = 33/407 (8%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            L  ++  +   G+++   ++  I++  SG IK+  V+ G ++  G  L+  +  +    
Sbjct: 49  FLGKVDKVIEGHGKVIPNGDIKTIQAVSSGKIKEINVKEGDRVEAGKVLVQLDSSDNDLE 108

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   +  + NL+  +   ++  D + N   +    F +  E++     +Y  T S+V   
Sbjct: 109 LANYQTQLANLKVELRILENDRDGVWNDEGI---DFTNVSEKIKASYEEYKKTKSQVDGN 165

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
              S  R +     ++        + +NK        ++  +   +     +K       
Sbjct: 166 RNESNQRKINDAQDKINDAEKEATEAKNKLDAAANTPNNETQKQYLQTQYNDK------- 218

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                             +   ++  + ++ L  +   E  +        +   ++   +
Sbjct: 219 ------------------LSSVEDYKKQLDSLQKQIEAEETSRKSSTIEQILTKEKDIQN 260

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              K+  ++  + +  I+SP+AG I      +        + +  I+P      + A V 
Sbjct: 261 IEFKINEIKNQKTKSEIVSPVAGYISTLNYNTLGVPVIMDKSVATIIPDDTEMIVEAYVN 320

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            + I  + +G    ++F  Y+  +      +++ I     Q +        Y+V +K+  
Sbjct: 321 NRDISEITEGQKVALKFEAYSYQKYGAVDGVVDYISNNAIQDEKQGGV---YKVNIKLDK 377

Query: 396 LAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
                     ++  G    V        +    + P  +   K F R
Sbjct: 378 QYIEAGGSQFKIMPGMNVSVELLCGKRRIIDFFLEPFNNAVEKTFSR 424


>gi|86145212|ref|ZP_01063543.1| hypothetical protein MED222_04825 [Vibrio sp. MED222]
 gi|85836789|gb|EAQ54909.1| hypothetical protein MED222_04825 [Vibrio sp. MED222]
          Length = 449

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 70/429 (16%), Positives = 148/429 (34%), Gaps = 23/429 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            S+ +  L+  +  +  I  +    I+I VS  GE+L E +V +++    GI+++  V  
Sbjct: 36  TSVHKTLLIIFLLALVAIAVASQARIDIVVSVRGELLLESDVEKVQHLEGGILEELLVRK 95

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G P+     ++    +D     I  L       +S         D++E  F S 
Sbjct: 96  GEVVYEGQPIARIRSLDRNTQLDTVNTEIIQLELDKIRYESL-------RDMVEPNFASY 148

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVY---RSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E+  + +    +T  + F+   S+       +K K + + S+   R   EN+ SL+R  
Sbjct: 149 IEKYPEQVQVNMNTWQQEFSKNRSNEELITHDIKHKNSLIGSMLKRRKSSENQLSLIRKQ 208

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+           L+++   S  D+   +        E+        N    +++L  + 
Sbjct: 209 LNIKN-------TLYKEEMASYVDVLNMKVQESNMVREIENLDESVMNERFQLDKLEKQH 261

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                N   E    + Q  +    +           ++  + SP+ G +        S  
Sbjct: 262 RDLVENRNSEYQAQIIQANKDLKLKRILQPQHSDKVDRLIVYSPVDGVVDKLHFNFRSAV 321

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               + +  I P +   +  AK+  K +  V+ G    V+   Y   +    +  I  I 
Sbjct: 322 IPPGESIADIAPINNSLHGEAKIPRKDMGFVEIGQAVKVKMDTYNFAKYGFVEGTIASIS 381

Query: 372 PIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
               ++++      +Y   ++I    L       +L             +  + +    P
Sbjct: 382 RSSYEEEDAE----FYLAEIEIDRNFLERGGTQYKLSPYMEFTADVKTGSRRVIEYAAKP 437

Query: 430 ITDNWPKIF 438
           +       F
Sbjct: 438 VMSAIEDAF 446


>gi|218676621|ref|YP_002395440.1| ABC transporter: Membrane fusion protein (MFP) [Vibrio splendidus
           LGP32]
 gi|218324889|emb|CAV26656.1| ABC transporter: Membrane fusion protein (MFP) [Vibrio splendidus
           LGP32]
          Length = 449

 Score =  198 bits (503), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 70/429 (16%), Positives = 148/429 (34%), Gaps = 23/429 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            S+ +  L+  +  +  I  +    I+I VS  GE+L E +V +++    GI+++  V  
Sbjct: 36  TSVHKTLLIIFLLALVAIAVASQARIDIVVSVRGELLLESDVEKVQHLEGGILEELLVRK 95

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G P+     ++    +D     I  L       +S         D++E  F S 
Sbjct: 96  GEVVYEGQPIARIRSLDRNTQLDTVNTEIIQLELDKIRYESL-------RDMVEPNFASY 148

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVY---RSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E+  + +    +T  + F+   S+       +K K + + S+   R   EN+ SL+R  
Sbjct: 149 IEKYPEQVQVNMNTWQQEFSKNRSNEELITHDIKHKNSLIGSMLKRRKSSENQLSLIRKQ 208

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+           L+++   S  D+   +        E+        N    +++L  + 
Sbjct: 209 LNIKN-------TLYKEEMASYVDVLNMKVQESNMVREIENLDESVMNERFQLDKLEKQH 261

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                N   E    + Q  +    +           ++  + SP+ G +        S  
Sbjct: 262 RDLVENRNSEYQAQIIQANKDLKLKRILQPQHSDKVDRLIVYSPVDGVVDKLHFNFRSAV 321

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               + +  I P +   +  AK+  K +  V+ G    V+   Y   +    +  I  I 
Sbjct: 322 IPPGESIADIAPINNSLHGEAKIPRKDMGFVEIGQAVKVKMDTYNFAKYGFVEGTIASIS 381

Query: 372 PIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
               ++++      +Y   ++I    L       +L             +  + +    P
Sbjct: 382 RSSYEEEDAE----FYLAEIEIDRNFLERGGTQYKLSPYMEFTADVKTGSRRVIEYAAKP 437

Query: 430 ITDNWPKIF 438
           +       F
Sbjct: 438 VMSAIEDAF 446


>gi|119487783|ref|ZP_01621292.1| Secretion protein HlyD [Lyngbya sp. PCC 8106]
 gi|119455616|gb|EAW36753.1| Secretion protein HlyD [Lyngbya sp. PCC 8106]
          Length = 531

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 69/462 (14%), Positives = 170/462 (36%), Gaps = 43/462 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L +   +   ++    ++  I   TW+ L  ++    + GE++ + NV ++     G I 
Sbjct: 63  LDQPPASFPMQLFWGGVVFCIAFATWAHLGTVDEVGHARGELIPQGNVYKVNPVEMGKIA 122

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR--------------------- 107
              V+ G  +  G  +   +       I+  +  + +L+                     
Sbjct: 123 TLAVKEGDTVKAGQVIAELDSQLALAEIERLQQQLNSLQIEQTQKQGLLERTHLEKESRS 182

Query: 108 --------------CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                           + T+    + + ++  +  ++ ++R E +     +      K++
Sbjct: 183 AISAAQIQTHEAEIERVKTQIRGTERVLSQLQLQAESAQARVENIQPLPTQADELLEKLY 242

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +SV R  ++K           L  + + SL     +  Q  L+   +  E+   +Q
Sbjct: 243 VDQAASVERVERLKPLVEEGAISQELLFQAEQSLRDRERAIVQAQLSEKNSTKEQVFQAQ 302

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL---EFANYLKEISRDLEQNQ 270
             L ++++++ ++  EL++   E   +   + +   EA     E     ++I  ++ Q Q
Sbjct: 303 QMLRERQQMITQNEGELQQLQAEVNRLYVELKQKQSEAEAIEIEADQKTQQIQLEIMQLQ 362

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +  S L   +  RE++ I +P+ G I      +     Q  Q + +I+P +    +
Sbjct: 363 AQMKETKSLLMAAKMKREERFIYAPVDGYISTLNVSNEGEVVQPGQNIAEILPKNTPLVL 422

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A +  ++   +K G    ++F  Y        +  +  I P    ++N       Y++ 
Sbjct: 423 SASLPNQEAGFIKVGMPVKMKFDAYPYQDYGVIEGTVTSISPDTKSEENQP---PVYQLE 479

Query: 391 LKITDLAFSDNNIEL--RNGFPAEVLFTAKNTTLAQEIIHPI 430
           +++   +  +N  E+  + G  A      +   +A  I+ P+
Sbjct: 480 VELEQDSILENQEEIKFKPGQTASADIIIRQRRVADVILEPL 521


>gi|218768749|ref|YP_002343261.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis Z2491]
 gi|121052757|emb|CAM09102.1| putative periplasmic type I secretion system protein [Neisseria
           meningitidis Z2491]
          Length = 454

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 56/401 (13%), Positives = 138/401 (34%), Gaps = 9/401 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  +        P    R  +   +     + WS    I+I  ++SG+ ++      I+ 
Sbjct: 43  HLELTDTPVSAAPKWAARFIMAFALL---ALLWSWFGKIDIVAAASGKTVSGGRSKTIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  + QG  L   E + T   +   + +++  +      ++ L  L 
Sbjct: 100 LETVVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALE 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++        ++R   L D   +     ++   +   +         + +R         
Sbjct: 160 SRTVPHIDMAQARSLGLSDADVQSAQVLAQ---HQYQAWAAQDAQLQSALRGHQAELQSA 216

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   L ++ +  Q+     + L   N +S++   +Q+     +  +L     + + + 
Sbjct: 217 KAQEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +      L   N  ++    L Q          +    ++ ++  TI SP  GT+ 
Sbjct: 277 AAIAQAEQNRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGTVQ 336

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              +++     Q +Q +M + P      +   V  K I  V++G  A V+   +   R  
Sbjct: 337 ELATYTVGGVVQAAQKMMVVAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPYTRYG 396

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
                ++ +       +   Q    Y  ++ +     + + 
Sbjct: 397 YLTGKVKSVSHDAVSHE---QLGLVYTAVVSLDKHTLNIDG 434


>gi|293420890|ref|ZP_06661324.1| membrane spanning export protein [Escherichia coli B088]
 gi|291324760|gb|EFE64176.1| membrane spanning export protein [Escherichia coli B088]
          Length = 300

 Score =  197 bits (502), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 53/315 (16%), Positives = 116/315 (36%), Gaps = 38/315 (12%)

Query: 129 KAFESREEQLLDFLGKYHS---TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +  E+R   L     +  +   + S  F   + +  R  +  + R+R     + +L    
Sbjct: 3   RESEARVNNLEAVRARLRAEAYSESLTFPEDVPADLRERESTVYRLR-----KTELAQSI 57

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           S L+   +   K++ M + +  + A+S+ +L + +R                        
Sbjct: 58  SGLKQSKALLDKEIAMTRPIVREGAMSEVELLRMQR---------------------QSA 96

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           EL  + + +   YL E   +L + +   A     +       E+  + +P+ G +   + 
Sbjct: 97  ELQLQMDEKQNKYLTEAGAELVKTEAELAQAKENMAGRADPVERSRLRAPLRGIVKNIRV 156

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +        Q +M+I+P      I A + P+ + +V+ G  A V+   Y          
Sbjct: 157 NTLGGVVSAGQDIMEIIPLEDQLLIEAYINPRDVAYVRTGMPALVKLTAYDYAIYGGLDG 216

Query: 366 IIEKIDPIISQQDNNLQT------QEYYEVILKITDLAFSDNN---IELRNGFPAEVLFT 416
           ++  + P   ++            + YY V++  ++   +D N   + +  G  A V   
Sbjct: 217 VVTLVSPDTLREQKRPGDLKLDPNEAYYRVLVTTSNNYLTDRNGKILPVIPGMIASVDIK 276

Query: 417 AKNTTLAQEIIHPIT 431
               ++ Q +I PIT
Sbjct: 277 TGQKSVFQYLIKPIT 291


>gi|300693300|ref|YP_003749273.1| type I secretion adaptor protein (hlyd family) [Ralstonia
           solanacearum PSI07]
 gi|299075337|emb|CBJ34631.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum PSI07]
          Length = 447

 Score =  197 bits (502), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 56/400 (14%), Positives = 140/400 (35%), Gaps = 36/400 (9%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
            WSIL  ++I V+++G+I+  +    I +     ++K  VE G  +  G  L+  +   +
Sbjct: 75  AWSILGKVDIIVNATGKIIPSERTKTIAAVEVATVRKLHVEEGQVVKAGDVLIELDARAS 134

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               D    + +  R      ++ +D L +         E+   +               
Sbjct: 135 DSERDKAVGNAQLARLQAARSRALIDALGHGRTPHLPTLEAIPPE--------------- 179

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                   + + +  + + R        L+ +       L    +      +L +   VS
Sbjct: 180 ------RWHEAEQHLVDQWRDYTAKLNRLDGEIRRYAEELPIATQRARDYADLAKDRDVS 233

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           ++   ++E    ++ +++   + + ++    +         +     K+I  +  ++ R 
Sbjct: 234 RHAYLEKE----QARIDIEGQLRDARDQKAALTAETRRVAQDSLTDAKKILGESSEDARR 289

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            +    +L           +++P++GT+      +       +QPLM+IVP   +  + A
Sbjct: 290 ASAHSEQLK----------LVAPVSGTVQQLTVHTVGTAVPLAQPLMQIVPEQSVVEVEA 339

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            +  K +  V++G  A V+   +   +     A +  +     + +         +V L 
Sbjct: 340 FLENKDVGFVQEGQEAQVKIDTFEYTKYGTIPARVTHVSRDAIEDEKKGLIYSV-KVTLD 398

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            T +      I+L  G    V        + + ++ P+  
Sbjct: 399 RTSIDVDGRKIKLSPGMSTSVEIKTGTRRVIEYVLSPLIQ 438


>gi|75908771|ref|YP_323067.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75702496|gb|ABA22172.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 498

 Score =  197 bits (500), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 69/467 (14%), Positives = 156/467 (33%), Gaps = 38/467 (8%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K +K   P   + +     + + G I W+ L  I+    + GE++    V  + S   G 
Sbjct: 32  KAVKELPPLYTRLLAGTISLVVFGTIAWAALSEIDEVAVAQGELIASAQVRPVTSLGDGT 91

Query: 67  IKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           IK  +V+ G ++ +   L+  +                L +  I+ L+      ++    
Sbjct: 92  IKAIKVQEGDRVTKDQVLIQRDPDLKQTDVTRLAQSTKLIQQDIQRLQAERIGGQTTGTP 151

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           + ++            +   +       +        +  +  +L    T + +   N  
Sbjct: 152 IQDELLKSRLRDYQARQAAAEAEASRQRSLIDQARVRLIRLQDNLVNARTSVANAKTNLF 211

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS--------------------------- 212
           +  + SS +   L   Q     ++ L    AV                            
Sbjct: 212 NARSISSKVEENLEIAQSREKNLRILITPGAVPRVDYLEARERLTRAQTDITRAKDEVIN 271

Query: 213 -QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            QN L + E  V     ++     E +   +      ++A    +    EI  ++ + + 
Sbjct: 272 AQNRLTEAEDKVTSLEKDISAQDQEIRQAEQAYQAARNQAQRVVSERQSEILTEMNKRKE 331

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
              +   +L   +K  + +TI +P+AGTI   +  ++    Q  + L+ I+P  +   + 
Sbjct: 332 ELTNVSGQLEQAKKQTDGETIKAPVAGTIYKIK--ATKGPVQSGEELLSILPEGEEMLLE 389

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            KV  + I  ++KG  A V+   +        +  + ++ P  +             + L
Sbjct: 390 VKVLNRDIGFIRKGMRAKVKMATFPFQEFGTIEGEVAQVSPNATIDKELGLVFP-TRIKL 448

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
               ++    N+    G  A      +  ++   I+ P+T  + + F
Sbjct: 449 NQHFVSVRGQNVTFTPGMAASGEIVTRKKSILTFIMEPVTRRFSEAF 495


>gi|299068683|emb|CBJ39920.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum CMR15]
          Length = 447

 Score =  196 bits (499), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 134/399 (33%), Gaps = 36/399 (9%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WSIL  ++I V+++G+I+  +    I +     ++K  VE G  +  G  L+  +   + 
Sbjct: 76  WSILGKVDIIVNATGKIIPSERTKTIAAVEVATVRKLHVEEGQIVKAGDVLIELDARASD 135

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              D    + +  R      ++ ++ L++         +       +             
Sbjct: 136 SERDKALGNEQLARLQAARSRALIEALDHGGTPHLPPLDGIPSVRWN------------- 182

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    S +  + + R        L+ +       L    +      +L + + VSQ
Sbjct: 183 --------ESEQHLVDQWRDYTAKLNRLDGEIRRYAEALPLATQRARDYADLAKDHDVSQ 234

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +   ++E+    +  +LR              E  D+     A   +     L   ++  
Sbjct: 235 HAYIEKEQARIDTEGQLR--------------EARDQKTALTAETRRVAQDSLTDAKKIL 280

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +            EQ  +++P++GT+      +       +QPLM+IVP   +  + A 
Sbjct: 281 GESSEDARRASVHSEQLKLVAPVSGTVQQLTVHTVGTAVPVAQPLMQIVPEQSVVEVEAF 340

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +  K +  V++G  A V+   +   +     A +  +     + +          V L  
Sbjct: 341 LENKDVGFVQEGQEAQVKIDTFEYTKYGTIPARVTHVSRDAIEDEKKGLIYSV-LVTLDK 399

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           T +      I+L  G    V        + + ++ P+  
Sbjct: 400 TSIDVDGRKIKLSPGMSTTVEIKTGTRRVIEYVLSPLIQ 438


>gi|17548512|ref|NP_521852.1| hemolysin secretion-like transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17430759|emb|CAD17442.1| probable typeIsecretion system transmembrane protein [Ralstonia
           solanacearum GMI1000]
          Length = 447

 Score =  196 bits (498), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 55/399 (13%), Positives = 138/399 (34%), Gaps = 36/399 (9%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WSIL  ++I V+++G+I+  +    I +     ++K  VE G  +  G  L+  +   + 
Sbjct: 76  WSILGKVDIIVNATGKIIPSERTKTIAAVEVATVRKLHVEEGQIVKAGDVLIELDARASD 135

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              D    + +  R      ++ +  L+          E    +                
Sbjct: 136 SERDKAVGNEQLARLQAARSRALIGALDQGGTPHLPPLEGIPPE---------------- 179

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                 ++ + +    + R        L+ +       L    +      +L + + VSQ
Sbjct: 180 -----RLHEAEQHLADQWRDYTAKLNRLDGEIRRYAEALPLATQRARDYADLAKDHDVSQ 234

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +   ++E    ++ +++   + + ++    +         +     K++  +  ++ R  
Sbjct: 235 HAYLEKE----QARIDIEGQLRDARDQKAALTAETRRVAQDSLTDAKKVLGESSEDARRA 290

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           +    +L           +++P++GT+      +       +QPLM+IVP   +  + A 
Sbjct: 291 SVHSEQLR----------LVAPVSGTVQQLTVHTVGTAVPVAQPLMQIVPEQSVVEVEAF 340

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +  K +  V++G  A V+   +   +     A +  +     + +          V L  
Sbjct: 341 LENKDVGFVQEGQDAQVKIDTFEYTKYGTIPARVTHVSRDAIEDEKKGLIYSV-MVTLDK 399

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           T +      I+L  G    V        + + ++ P+  
Sbjct: 400 TSIDVDGRKIKLSPGMSTTVEIKTGTRRVIEYVLSPLIQ 438


>gi|209808889|ref|YP_002264427.1| putative type I secretion protein, HlyD family [Aliivibrio
           salmonicida LFI1238]
 gi|208010451|emb|CAQ80810.1| putative type I secretion protein, HlyD family [Aliivibrio
           salmonicida LFI1238]
          Length = 442

 Score =  196 bits (498), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 61/425 (14%), Positives = 141/425 (33%), Gaps = 18/425 (4%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S  ++ ++ ++  + L+ WS    I+I+VS+ GE L + +V +++    GI+ +  V  G
Sbjct: 31  STHKIFIVIVVFTLFLLVWSSQATIDITVSTRGEALLDSDVEKVQHLEGGILNEVYVSPG 90

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +      +    +   +  I  L+               KY+ L        
Sbjct: 91  DLVFKGQKIALLTSKDRVSELSSTQYEITGLQIE-----------QQKYNALISNSTPNF 139

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
              ++F  +   T S  +    +    S ++ L  ++        ++ +     + L   
Sbjct: 140 TAYINF-PELVETHSLSWEEESNRNRSSDELILHDIKHKQSLIASMQRRVKSSNSQLGLI 198

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++ L + + LF++   S  D+   +        E+        N    +  L    +   
Sbjct: 199 KQQLKIKQQLFDEEMASYVDVLNMKVQHMNMVREIENLREGILNEEFQLVRLEKLLDDTQ 258

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                E    L +  +    ++++L  +    ++  + SP+ GT+        S      
Sbjct: 259 KTRSTEYYAKLTEVNKQLKIKLTQLPTISDKVDRLLVFSPVDGTVDKVNYNYLSAIISPG 318

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             +  I P     +   K+  K +  ++KG    ++F  Y   +       I  I     
Sbjct: 319 DSIADITPLKNTLHAEVKIPRKDVGFIEKGQEVKLKFDAYNFAKYGVITGSISSISRSSY 378

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           ++             + IT      N I+  +             N  +    + P+   
Sbjct: 379 EEKEEEYY----LAKIDITQNYLERNGIKYHISPYMEFTADIKTGNRKIIDYALKPVMAA 434

Query: 434 WPKIF 438
             + F
Sbjct: 435 LDESF 439


>gi|209542172|ref|YP_002278353.1| type I secretion membrane fusion protein, HlyD family
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209533352|gb|ACI53288.1| type I secretion membrane fusion protein, HlyD family
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 463

 Score =  196 bits (498), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 66/449 (14%), Positives = 147/449 (32%), Gaps = 41/449 (9%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H      +      S + ++ +        I + ++ P+   VS+ G+I++    + ++ 
Sbjct: 19  HSPTAALVNMPATPSARYISWIIGALTASSIVFMMVFPLTRVVSTEGKIVSIQRPLVVQP 78

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALD 118
             + II+   V  G  + +G  L   +       I   K   ++       +  E    D
Sbjct: 79  FETSIIRSVDVREGDLVHKGQVLSRLDPTVNDADIANLKSQTQSYTAEVARLSAEAQGRD 138

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           +L++  D        ++           +   + +   ++S    L+  L    +IY  R
Sbjct: 139 YLSDPDD----PASIQQAATFLRRKAEFAAKIENYQEQLASQAADLQGALANA-TIYAKR 193

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           L++      +R  L   Q++    +        +QND+ + +R    +        H+  
Sbjct: 194 LEVATNVHRMRTRL---QEEQVGSRL---STLGAQNDMMEVQRSEVLAQ-------HDAA 240

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           +    +  L  E       +  +I RDL + Q   +   +     +  +    + +    
Sbjct: 241 SAKAKLQALVAERQEYIETWRADIYRDLSEAQHKLSTTDADYQKAKLRKSMTILTAQEDA 300

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++     S  +       LM++VP      +   ++ K    V+ G  A ++F  +   
Sbjct: 301 VVLTIARLSPGSVLTTGAELMRLVPVDSGLEVEVHLSSKDAGFVQPGNKAIIKFAAFPYS 360

Query: 359 REKKFKAIIEKIDPIISQ------------------QDNNLQTQEYYEVILKITDLAFS- 399
           +    +A++ +I                         D     Q YY   L I D     
Sbjct: 361 QYGGAEALVREISADTFDGNTSQDAVSNGGIGQRASNDPAAAAQSYYRARLHIEDYRLHG 420

Query: 400 -DNNIELRNGFPAEVLFTAKNTTLAQEII 427
             ++   R G P          T+ Q ++
Sbjct: 421 VPSSFHPRPGMPITADIQVGTRTIMQFLL 449


>gi|198244512|ref|YP_002218155.1| hypothetical protein SeD_A4655 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|197939028|gb|ACH76361.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
          Length = 416

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 66/406 (16%), Positives = 144/406 (35%), Gaps = 20/406 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + I   V   G I  +DN   I     G I+   V  G  + +G  L    +++    
Sbjct: 16  YFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNLD---- 71

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                     L+      ++   +L+   + +    +   E  L  L    S  +K    
Sbjct: 72  ----------LQKEYQRYRTQKGYLDKDVNEISFILDKENESGLITLDGTRSLSNKEVKA 121

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            I  V+  ++ K  +  S+      L+ K S     L+   +++ ++  L +K      +
Sbjct: 122 NIELVHSQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTN 181

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              +++   K   E+ +           I  + ++           +S+ + +N +    
Sbjct: 182 FLNKKQTYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLSKIISKNLQELEV 241

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQ--SFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
             S L ++EK   ++ I SP+ G I      + +     Q +  L +I P  +      K
Sbjct: 242 VNSTLKVIEKQINEEDIYSPVDGVIYKINKSATTHGGVIQAADLLFEIKPKVRTMLADVK 301

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           + PK    +       +        + K + A I+ I P   +++     Q YY+VI+  
Sbjct: 302 ILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVIIAF 361

Query: 394 TDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                +++++  L+ G   +        ++ + ++ P+     K F
Sbjct: 362 D---VNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 404


>gi|326625953|gb|EGE32298.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 425

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 66/406 (16%), Positives = 144/406 (35%), Gaps = 20/406 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + I   V   G I  +DN   I     G I+   V  G  + +G  L    +++    
Sbjct: 25  YFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNLD---- 80

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                     L+      ++   +L+   + +    +   E  L  L    S  +K    
Sbjct: 81  ----------LQKEYQRYRTQKGYLDKDVNEISFILDKENESGLITLDGTRSLSNKEVKA 130

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            I  V+  ++ K  +  S+      L+ K S     L+   +++ ++  L +K      +
Sbjct: 131 NIELVHSQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTN 190

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              +++   K   E+ +           I  + ++           +S+ + +N +    
Sbjct: 191 FLNKKQTYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLSKIISKNLQELEV 250

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQ--SFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
             S L ++EK   ++ I SP+ G I      + +     Q +  L +I P  +      K
Sbjct: 251 VNSTLKVIEKQINEEDIYSPVDGVIYKINKSATTHGGVIQAADLLFEIKPKVRTMLADVK 310

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           + PK    +       +        + K + A I+ I P   +++     Q YY+VI+  
Sbjct: 311 ILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVIIAF 370

Query: 394 TDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                +++++  L+ G   +        ++ + ++ P+     K F
Sbjct: 371 D---VNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 413


>gi|298490885|ref|YP_003721062.1| secretion protein HlyD family protein ['Nostoc azollae' 0708]
 gi|298232803|gb|ADI63939.1| secretion protein HlyD family protein ['Nostoc azollae' 0708]
          Length = 522

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 78/453 (17%), Positives = 159/453 (35%), Gaps = 47/453 (10%)

Query: 17  LKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             R  +++++ +      W+    +E  V ++G++  E  V E+++P +G++K   V++G
Sbjct: 55  WSRTIMITLMVVACFGVGWAYFSKLEQVVPATGQLKPEGTVKEVQAPINGVVKSVYVKDG 114

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS---ALDFLNNKYDVLEKAFE 132
             + +G  +LTFE + T   +         L    D  +    A   + ++ D L     
Sbjct: 115 QTVKKGDLILTFESVATLAELSSLNKIRVALTKENDIYRRLMGASTGITSELDFLRSNLS 174

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR--- 189
                LL        T +++    + +        +   + +   + +L+++SS  +   
Sbjct: 175 PESAFLLKHRASL-VTENELLRSQLKNTPPENSNGIDEQQRLIAAKRELDSRSSAAKLEV 233

Query: 190 ------------------ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                               L+   + L  +K L  +  +SQ     Q++ V     E+ 
Sbjct: 234 EKIRKQLSQTIVKIRNTQDSLAIQTQILDKLKILAVEGGISQLQYLNQQQQVQTLKAEIS 293

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE------------------QNQRTF 273
           +   E+K +   I +   E     A   K +   +                    N++  
Sbjct: 294 QLTEEEKRLQLDIQKGQQEVTNTVAVTDKNVLEQIANNKKRIAEIDSQFMKIILDNEQKL 353

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            D  SK++  +     + + +PI GT+   Q+ +    A  +Q L++IVP +        
Sbjct: 354 GDINSKISQTQLNVRYQEVRAPIEGTVFDMQAKNPGFVANTTQKLLQIVP-NDKYVAEVF 412

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILK 392
           +T K I  V+ G    VR   +        K  +  I       D   Q   +   V L 
Sbjct: 413 ITNKDIGFVRVGMNVDVRIDSFPFSEFGDIKGQVIDIGSDALPPDQIHQFYRFPARVSLH 472

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTA-KNTTLAQ 424
              L      I L++G          +  T+  
Sbjct: 473 KQKLETQGKKIALQSGMSITGNIKVREERTVLS 505


>gi|91227020|ref|ZP_01261557.1| hypothetical protein V12G01_06646 [Vibrio alginolyticus 12G01]
 gi|269968339|ref|ZP_06182359.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91188822|gb|EAS75108.1| hypothetical protein V12G01_06646 [Vibrio alginolyticus 12G01]
 gi|269827057|gb|EEZ81371.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 449

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 63/426 (14%), Positives = 142/426 (33%), Gaps = 17/426 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            S+ +  L+  +  +  I  +    I+I VS  GE+L E ++ +++    GI+++  V  
Sbjct: 36  TSVHKTLLVIFLLSMVAIAVASQARIDIVVSVRGELLLESDIEKVQHLEGGILEEMLVRK 95

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G P+     ++    +D     I  L       +S  D +   +     A+  +
Sbjct: 96  GEVVYEGQPIARLRSLDRNTQLDTVNTEIIQLELDKIRYESLRDMVEPDF----SAYIEK 151

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             +L+                    +   ++ K + + S+   R   EN+ SL+R     
Sbjct: 152 YPELVQVNMNTWQQEFSKNRSNEELITHDIQHKNSLIDSMLKRRKSSENQLSLIR----- 206

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             K L +   L+++   S  D+   +        E+        N    +++L  +    
Sbjct: 207 --KQLNIKNTLYKEEMASYVDVLNMQVQESNMVREIENLDESVMNERFQLDKLEKQYRDL 264

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N   E    + Q  +    +           ++  + +PI G +        S     
Sbjct: 265 VENRNAEYQAQIIQANKDLKLKRILRPQHSDKVDRLVVYAPIDGVVDKVHFNFRSAVIPP 324

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + +  I P +   +  AK+  K +  V+ G    V+   Y   +    +  I  I    
Sbjct: 325 GESIADIAPINNALHGEAKIPRKDMGFVEIGQAVKVKMDTYNFAKYGFLEGRIASISRSS 384

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            ++++      +Y   ++I+           +L             +  + +    P+  
Sbjct: 385 YEEEDAE----FYLAEIQISQNYLERGGTQYKLSPYMEFTADVKTGSRRVIEYAAKPVMS 440

Query: 433 NWPKIF 438
                F
Sbjct: 441 AIEDAF 446


>gi|161617394|ref|YP_001591359.1| hypothetical protein SPAB_05249 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167991456|ref|ZP_02572555.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168231262|ref|ZP_02656320.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168243663|ref|ZP_02668595.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168263412|ref|ZP_02685385.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168466949|ref|ZP_02700797.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|194443738|ref|YP_002043512.1| hypothetical protein SNSL254_A4605 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450071|ref|YP_002048252.1| hypothetical protein SeHA_C4604 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194469521|ref|ZP_03075505.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197248154|ref|YP_002149175.1| hypothetical protein SeAg_B4519 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197264567|ref|ZP_03164641.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197300899|ref|ZP_03166228.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|200388980|ref|ZP_03215592.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205359915|ref|ZP_02833290.2| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|224586028|ref|YP_002639827.1| type-I secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238912992|ref|ZP_04656829.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|161366758|gb|ABX70526.1| hypothetical protein SPAB_05249 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402401|gb|ACF62623.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408375|gb|ACF68594.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194455885|gb|EDX44724.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|195630655|gb|EDX49267.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197211857|gb|ACH49254.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197242822|gb|EDY25442.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197289950|gb|EDY29309.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|199606078|gb|EDZ04623.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205330118|gb|EDZ16882.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205334325|gb|EDZ21089.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205337270|gb|EDZ24034.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205342088|gb|EDZ28852.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205347957|gb|EDZ34588.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|224470556|gb|ACN48386.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|312915364|dbj|BAJ39338.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223130|gb|EFX48200.1| Putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
          Length = 416

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 66/406 (16%), Positives = 144/406 (35%), Gaps = 20/406 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + I   V   G I  +DN   I     G I+   V  G  + +G  L    +++    
Sbjct: 16  YFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNLD---- 71

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                     L+      ++   +L+   + +    +   E  L  L    S  +K    
Sbjct: 72  ----------LQKEYQRYRTQKGYLDKDVNEISFILDKENESGLITLDGTRSLSNKEVKA 121

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            I  V+  ++ K  +  S+      L+ K S     L+   +++ ++  L +K      +
Sbjct: 122 NIELVHSQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTN 181

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              +++   K   E+ +           I  + ++           +S+ + +N +    
Sbjct: 182 FLNKKQAYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLSKIISKNLQELEV 241

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQ--SFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
             S L ++EK   ++ I SP+ G I      + +     Q +  L +I P  +      K
Sbjct: 242 VNSTLKVIEKQINEEDIYSPVDGVIYKINKSATTHGGVIQAADLLFEIKPKVRTMLADVK 301

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           + PK    +       +        + K + A I+ I P   +++     Q YY+VI+  
Sbjct: 302 ILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVIIAF 361

Query: 394 TDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                +++++  L+ G   +        ++ + ++ P+     K F
Sbjct: 362 D---VNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 404


>gi|16767510|ref|NP_463125.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56416059|ref|YP_153134.1| type-I secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62182709|ref|YP_219126.1| membrane permease, cation efflux pump [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|197364986|ref|YP_002144623.1| type-I secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|204926668|ref|ZP_03217870.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205355031|ref|YP_002228832.1| type-I secretion protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207859413|ref|YP_002246064.1| type-I secretion protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|3323590|gb|AAC26642.1| HLYD family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16422819|gb|AAL23084.1| membrane permease [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|32812844|emb|CAE11796.1| putative type-I secretion protein, putative inner membrane
           component [Salmonella typhimurium]
 gi|56130316|gb|AAV79822.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62130342|gb|AAX68045.1| membrane permease, predicted cation efflux pump [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|197096463|emb|CAR62069.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|204323333|gb|EDZ08528.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205274812|emb|CAR39871.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206711216|emb|CAR35592.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261249359|emb|CBG27222.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267996574|gb|ACY91459.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301160752|emb|CBW20283.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|320088667|emb|CBY98425.1| Leukotoxin secretion protein D [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322615415|gb|EFY12335.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618475|gb|EFY15364.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622113|gb|EFY18963.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627184|gb|EFY23976.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631144|gb|EFY27908.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637638|gb|EFY34339.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642523|gb|EFY39123.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322643621|gb|EFY40176.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322654664|gb|EFY50984.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659624|gb|EFY55867.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662167|gb|EFY58383.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666087|gb|EFY62265.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672507|gb|EFY68618.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675936|gb|EFY72007.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680421|gb|EFY76459.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684685|gb|EFY80689.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322717209|gb|EFZ08780.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323132600|gb|ADX20030.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323194637|gb|EFZ79828.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197121|gb|EFZ82262.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201761|gb|EFZ86825.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206275|gb|EFZ91237.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213286|gb|EFZ98088.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215657|gb|EGA00401.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222079|gb|EGA06465.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226490|gb|EGA10696.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229115|gb|EGA13244.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323236275|gb|EGA20351.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237605|gb|EGA21666.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241729|gb|EGA25758.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248124|gb|EGA32061.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323254546|gb|EGA38357.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323258394|gb|EGA42071.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323259674|gb|EGA43308.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265947|gb|EGA49443.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323270389|gb|EGA53837.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326630184|gb|EGE36527.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
 gi|332991076|gb|AEF10059.1| cation efflux pump [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 425

 Score =  195 bits (495), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 66/406 (16%), Positives = 144/406 (35%), Gaps = 20/406 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + I   V   G I  +DN   I     G I+   V  G  + +G  L    +++    
Sbjct: 25  YFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNLD---- 80

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                     L+      ++   +L+   + +    +   E  L  L    S  +K    
Sbjct: 81  ----------LQKEYQRYRTQKGYLDKDVNEISFILDKENESGLITLDGTRSLSNKEVKA 130

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            I  V+  ++ K  +  S+      L+ K S     L+   +++ ++  L +K      +
Sbjct: 131 NIELVHSQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTN 190

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              +++   K   E+ +           I  + ++           +S+ + +N +    
Sbjct: 191 FLNKKQAYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLSKIISKNLQELEV 250

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQ--SFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
             S L ++EK   ++ I SP+ G I      + +     Q +  L +I P  +      K
Sbjct: 251 VNSTLKVIEKQINEEDIYSPVDGVIYKINKSATTHGGVIQAADLLFEIKPKVRTMLADVK 310

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           + PK    +       +        + K + A I+ I P   +++     Q YY+VI+  
Sbjct: 311 ILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVIIAF 370

Query: 394 TDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                +++++  L+ G   +        ++ + ++ P+     K F
Sbjct: 371 D---VNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 413


>gi|213647205|ref|ZP_03377258.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
          Length = 416

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/406 (16%), Positives = 143/406 (35%), Gaps = 20/406 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + I   V   G I  +DN   I     G I+   V  G  + +G  L    + +    
Sbjct: 16  YFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNFD---- 71

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                     L+      ++   +L+   + +    +   E  L  L    S  +K    
Sbjct: 72  ----------LQKEYQRYRTQKGYLDKDVNEISFILDKENESGLITLDGTRSLSNKEVKA 121

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            I  V+  ++ K  +  S+      L+ K S     L+   +++ ++  L +K      +
Sbjct: 122 NIELVHSQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTN 181

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              +++   K   E+ +           I  + ++           +S+ + +N +    
Sbjct: 182 FLNKKQAYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLSKIISKNLQELEV 241

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQ--SFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
             S L ++EK   ++ I SP+ G I      + +     Q +  L +I P  +      K
Sbjct: 242 VNSTLKVIEKQINEEDIYSPVDGVIYKINKSATTHGGVIQAADLLFEIKPKVRTMLADVK 301

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           + PK    +       +        + K + A I+ I P   +++     Q YY+VI+  
Sbjct: 302 ILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVIIAF 361

Query: 394 TDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                +++++  L+ G   +        ++ + ++ P+     K F
Sbjct: 362 D---VNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 404


>gi|300696860|ref|YP_003747521.1| hemolysin D [Ralstonia solanacearum CFBP2957]
 gi|299073584|emb|CBJ53104.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum CFBP2957]
          Length = 447

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 133/399 (33%), Gaps = 36/399 (9%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WSIL  ++I V+++G+I+  +    I +     ++K  VE G  +  G  L+  +   + 
Sbjct: 76  WSILGKVDIIVNATGKIIPSERTKTIAAVEVATVRKLHVEEGQVVKAGDVLIELDARASD 135

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              D    + +  R      ++ +D L++         +       +             
Sbjct: 136 SERDKALGNEQLARLQAARSRALIDALDHGGTPHLPPLDGIPPVRWN------------- 182

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    S +  + + R        L+ +       L    +      +L + + VSQ
Sbjct: 183 --------ESEQHLVDQWRDYTAKLNRLDGEIRRYAEALPLATQRARDYADLAKDHDVSQ 234

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +   ++E+       +LR              E  D+     A   +     L   ++  
Sbjct: 235 HAYIEKEQARIDIEGQLR--------------EARDQKTALTAETRRVAQDSLTDAKKIL 280

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +            EQ  +++P++GT+      +       +Q LM+IVP   +  + A 
Sbjct: 281 GESSEDARRASVHSEQLKLVAPVSGTVQQLTVHTVGTAVPVAQALMQIVPEQSVVEVEAF 340

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +  K +  V++G  A V+   +   +     A +  +     + +         +V L  
Sbjct: 341 MENKDVGFVQEGQEAQVKIDTFEYTKYGTIPARVTHVSRDAIEDEKKGLIYSV-KVALDR 399

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           T +      I+L  G    V        + + ++ P+  
Sbjct: 400 TSIDVDGRKIKLSPGMSTSVEIKTGTRRVIEYVLSPLIQ 438


>gi|83745825|ref|ZP_00942882.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum UW551]
 gi|207728293|ref|YP_002256687.1| typeIsecretion system protein [Ralstonia solanacearum MolK2]
 gi|207739789|ref|YP_002258182.1| typeIsecretion system protein [Ralstonia solanacearum IPO1609]
 gi|83727515|gb|EAP74636.1| Type I secretion adaptor protein (HlyD family) [Ralstonia
           solanacearum UW551]
 gi|206591539|emb|CAQ57151.1| typeIsecretion system protein [Ralstonia solanacearum MolK2]
 gi|206593171|emb|CAQ60077.1| typeIsecretion system protein [Ralstonia solanacearum IPO1609]
          Length = 447

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/399 (15%), Positives = 133/399 (33%), Gaps = 36/399 (9%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WSIL  ++I V+++G+I+  +    I +     ++K  VE G  +  G  L+  +   + 
Sbjct: 76  WSILGKVDIIVNATGKIIPSERTKTIAAVEVATVRKLHVEEGQVVKAGDVLIELDARASD 135

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              D    + +  R      ++ +D L++         +       +             
Sbjct: 136 SERDKALGNEQLARLQAARSRALIDALDHGGTPHLPPLDGIPPVRWN------------- 182

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    S +  + + R        L+ +       L    +      +L + + VSQ
Sbjct: 183 --------ESEQHLVDQWRDYTAKLNRLDGEIRRYAEALPLATQRARDYADLAKDHDVSQ 234

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +   ++E+       +LR              E  D+     A   +     L   ++  
Sbjct: 235 HAYIEKEQARIDIEGQLR--------------EARDQKTALTAETRRVAQDSLTDAKKVL 280

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +            EQ  +++P++GT+      +       +Q LM+IVP   +  + A 
Sbjct: 281 GESSEDARRASVHSEQLKLVAPVSGTVQQLTVHTVGTAVPVAQALMQIVPEQSVVEVEAF 340

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +  K +  V++G  A V+   +   +     A +  +     + +         +V L  
Sbjct: 341 MENKDVGFVQEGQEAQVKIDTFEYTKYGTIPARVTHVSRDAIEDEKKGLIYSV-KVALDR 399

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           T +      I+L  G    V        + + ++ P+  
Sbjct: 400 TSIDVDGRKIKLSPGMSTSVEIKTGTRRVIEYVLSPLIQ 438


>gi|16762940|ref|NP_458557.1| type-I secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29144427|ref|NP_807769.1| type I secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213851950|ref|ZP_03381482.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|25511940|pir||AB1018 probable type-I secretion protein STY4457 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16505247|emb|CAD09243.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29140065|gb|AAO71629.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 425

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 66/406 (16%), Positives = 143/406 (35%), Gaps = 20/406 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + I   V   G I  +DN   I     G I+   V  G  + +G  L    + +    
Sbjct: 25  YFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNFD---- 80

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                     L+      ++   +L+   + +    +   E  L  L    S  +K    
Sbjct: 81  ----------LQKEYQRYRTQKGYLDKDVNEISFILDKENESGLITLDGTRSLSNKEVKA 130

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            I  V+  ++ K  +  S+      L+ K S     L+   +++ ++  L +K      +
Sbjct: 131 NIELVHSQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTN 190

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              +++   K   E+ +           I  + ++           +S+ + +N +    
Sbjct: 191 FLNKKQAYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLSKIISKNLQELEV 250

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQ--SFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
             S L ++EK   ++ I SP+ G I      + +     Q +  L +I P  +      K
Sbjct: 251 VNSTLKVIEKQINEEDIYSPVDGVIYKINKSATTHGGVIQAADLLFEIKPKVRTMLADVK 310

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           + PK    +       +        + K + A I+ I P   +++     Q YY+VI+  
Sbjct: 311 ILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVIIAF 370

Query: 394 TDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
                +++++  L+ G   +        ++ + ++ P+     K F
Sbjct: 371 D---VNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 413


>gi|238899013|ref|YP_002924695.1| putative type I transport system, membrane permease HylD family
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229466773|gb|ACQ68547.1| putative type I transport system, membrane permease HylD family
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 424

 Score =  194 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 72/403 (17%), Positives = 147/403 (36%), Gaps = 20/403 (4%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +   +   G I N DN   I     G+I+K  V  G  + +G  L    +++       
Sbjct: 27  KVNSVIHGQGMITNRDNTQFISLSKGGVIEKIYVSEGESVKRGALLAKVINLD------- 79

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                  LR   +  K+   FL    + L         +            +K  +  I 
Sbjct: 80  -------LRKEYERLKAQKAFLVKDIEELTSLLNKNAVEDFSAWQDISLIKNKELSANIE 132

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            V   +  K  ++ S+      ++ +    +  ++   +++ ++  L +K   S  +   
Sbjct: 133 LVKSQIHTKTLKLGSLESEITGMKMQLKGKKEQVALLGEEVDILHPLVKKGITSYTNYLN 192

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           +++   K   E+ E  +         + + +E           +SR L ++Q+      +
Sbjct: 193 KKQAFIKLKSEMDETENNIILKKNDSHLVKNEIRALDNELRLSLSRQLSKDQQELNLMST 252

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQ--SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            L I E+  E++ + +P+ G I      + +     Q +  L +I P         KV P
Sbjct: 253 PLKIFEQQIEEENVRAPVNGVIYKINKSASTQGGVIQAADLLFEIKPSVNTMQAEIKVNP 312

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           K    +  G  A V        + K ++A IEKI P   +++ N   Q YY+VI+     
Sbjct: 313 KYRDQLYVGEQALVDILSLVKAKGKFYQASIEKISPDSYEENTNGSVQRYYKVIISFN-- 370

Query: 397 AFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
              + +++ L+ G   +        ++   +I P+T     +F
Sbjct: 371 -VKNEDMDWLKPGMAVDARVVTGKHSIMSYLISPLTKGISHVF 412


>gi|87303270|ref|ZP_01086063.1| possible effux transporter [Synechococcus sp. WH 5701]
 gi|87282165|gb|EAQ74126.1| possible effux transporter [Synechococcus sp. WH 5701]
          Length = 479

 Score =  193 bits (491), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 70/440 (15%), Positives = 154/440 (35%), Gaps = 46/440 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L R+H AS   +    +  I  ++ W+ + P+ ++V+  G++     V  +++P  G+I 
Sbjct: 76  LGRSHRAS-GLIAWTLVSSIGIVVVWAAVAPLSVAVAVQGKLQPGSKVKLVQAPVPGVID 134

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V+ G  + +G  L+ F+              ++ +   +   ++    L N+  +L 
Sbjct: 135 ALLVKEGETVRKGQSLVRFD--------------LREVTSKLAAAEAIRTRLRNENQILA 180

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            +   R    L              N  +    RS+ +   R  +    R + + +   L
Sbjct: 181 ASLGDRPATGL------------TANQQLQLENRSVDLSSRRQIAEQELRAN-QARIDGL 227

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L++ +  L    +L    AVS+  L +    V      L   +     +   +    
Sbjct: 228 RTSLATAENILGRFDSLARSGAVSELQLLEARSRVNDLNASLAVELETSAKLRAGVA--- 284

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A+   ++   +E N R  AD   ++ +     +   + +P  G +      + 
Sbjct: 285 ----NSVASPGADLRSQVEANLRQIADLTQQIDVARVQLQYSVLTAPSDGAVFDIDV-AP 339

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +    + PL+K+VP       +  +    I +++ G  A +    Y      +  A + 
Sbjct: 340 GSVVNTTTPLLKVVPAD-ALEAKVFIPNTAIGYLRPGQRADISLDTYPSNDYGRIPAKVL 398

Query: 369 KIDPIISQQDNNLQTQE------YYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNT 420
            I       +   QT +      ++  IL++   +      ++ L+ G         +  
Sbjct: 399 SIGSDALTTEEMAQTLQSNTQGLFFPAILQLERQSLRVGSRDVPLKPGMSLVADVQLRER 458

Query: 421 TLAQEIIHPITDNWPKIFER 440
           T    I   + D   +  ER
Sbjct: 459 TFLSVIASFLNDK-RRSLER 477


>gi|62946411|ref|YP_227616.1| hemolysin secretion protein [Nostoc sp. PCC 7120]
 gi|17134513|dbj|BAB77072.1| hemolysin secretion protein [Nostoc sp. PCC 7120]
          Length = 500

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 74/476 (15%), Positives = 179/476 (37%), Gaps = 59/476 (12%)

Query: 15  ASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           ++  R    +I+G+    I W+ +  IE SV ++G++  +  V EI++P +G++KK  V+
Sbjct: 17  STWSRAIAWTIVGVSVFTIIWASVFKIEESVHATGKLEPQGAVKEIQAPVNGVVKKILVK 76

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSALDFLNNKYDV 126
           +G ++ +G  L++ E   +   +   K S          L    D  +  L    ++  +
Sbjct: 77  DGQRVKKGEILVSLEQTTSEAELTSLKQSRAAQLQSKQSLELENDFYRRQLQGNISQQQI 136

Query: 127 LEKAFESREEQLLDFLGKYHS---TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++    + +  L  L K  S     ++++   ++     + +   +   +   + +LE+
Sbjct: 137 AQQTAILKIQPELALLTKSRSAIFAENELYRAQLNGTTTGVILTREQQLRLQNRQQELES 196

Query: 184 KSSLLR---------------------ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           + +  +                      +L  +++    +K L ++ A  +  + +QE+ 
Sbjct: 197 RLATAKLETQQTQQQLLQTQAQLGSAQDVLVINRQIYQNLKMLDKEGAYPRMQILKQEQE 256

Query: 223 VYKSTLELRENIHEQKNMLRHINEL-------------------------YDEANLEFAN 257
           V     E+     E++ +   + +                            E + +   
Sbjct: 257 VNVKQAEVMRLTQEKQRLQLAVTQANEKFRNTAALSQEDLLAKITDNDKRIAEIDSQLTK 316

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            + E  + L +     A+  S+L   ++T + + I +P+ GT+   ++ ++      S+ 
Sbjct: 317 VIIENQKRLYEINSQIAEIDSELAQAQQTLKYQKIAAPVDGTVFELKAQTAGFVVNSSET 376

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++K+VP       +  +T + I  V++G    VR   +        K  + +I       
Sbjct: 377 ILKLVPSDN-LVAKVYITNRDIGFVQEGQQVDVRIDSFPFQEYGDIKGELIEIGSDALPP 435

Query: 378 DNNLQTQEY-YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           D       +  +V L    L  +   I L++G         +  T+       + D
Sbjct: 436 DEVYNFWRFSAKVRLNGQKLLINQRQILLQSGMSINGNIKLRQRTVMSIFTDFLVD 491


>gi|163734755|ref|ZP_02142193.1| leukotoxin secretion protein D, putative [Roseobacter litoralis Och
           149]
 gi|161391860|gb|EDQ16191.1| leukotoxin secretion protein D, putative [Roseobacter litoralis Och
           149]
          Length = 438

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 56/435 (12%), Positives = 150/435 (34%), Gaps = 21/435 (4%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
               R  P  L  + +++++G +G   W +    +     +SG ++      +I++P SG
Sbjct: 19  ARAARRGPK-LASLFIMTLVGFLGGSLWMAASTVVPELTRASGALVPTGRYHQIQAPESG 77

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +    V  G +I  G  L                  +  +       ++ L  + +   
Sbjct: 78  TVVSVYVHEGQEIENGQVLAELSSATLDQYEQDIHQELAAIDTKARNFRAILAGVASDTP 137

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
               +F + E +  +   +  ++  +     ++   +     L R R +   R+  +  S
Sbjct: 138 T-SVSFSNPELEFAETQLRLFASKQRA-QEELTIRLQETLETLERARELAEKRVIAKTIS 195

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                        +   ++LF K   +  DL+ Q+  + +    L +       + + ++
Sbjct: 196 -------------VETDEDLFSKGLTTSRDLDAQKDRLDQLQARLVDVDVRLSQLQKEVS 242

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                      +  ++ +  L + +       ++  ++ + R++  + +P  G +     
Sbjct: 243 LAQSSTAQNRLSLEEKYTEKLFELELQREAADNRARVIAQQRDKLKLRAPANGVLHAIGF 302

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +          L +++P  +      +V P  I H+  G    ++F  +   R  + + 
Sbjct: 303 PNPGEIVNVGDVLFELLPTQQSLVAEIEVNPSDIGHISTGDPVALKFDTFDPRRYGQVEG 362

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFTAKNTTLA 423
            I  I P      +    QE++   + + + +  +     +L++G            T+ 
Sbjct: 363 EIISISPNSVMDVDT--GQEHFRATVALNNASIGEGVWQRDLQSGMTTTAEIVTDERTVL 420

Query: 424 QEIIHPITDNWPKIF 438
             ++ PI+ +    F
Sbjct: 421 AYLLKPISRSLENAF 435


>gi|307151229|ref|YP_003886613.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7822]
 gi|306981457|gb|ADN13338.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7822]
          Length = 505

 Score =  192 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 79/461 (17%), Positives = 176/461 (38%), Gaps = 34/461 (7%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  K L    P +  R  L  ++  + L+  W+I   I+ + ++ G I  E+  V++ + 
Sbjct: 35  YATKELLDTLPKAWTRGLLYFLLIFVSLVLPWAIFSKIDETGTARGRIEPEEETVKLDAA 94

Query: 63  FSGIIKKFQVENGSQILQGTPLLTF-------EDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            +G + + +V+ G  +  G  LL         +  +  D ++ +   +  L+        
Sbjct: 95  VAGTVSEIRVKEGDTVKAGQVLLMLESDLVKSDLKQAQDKLEGQLNRLNQLKLLKSQLIF 154

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           AL     +    E   +++ +Q    L    +T + + +  I+ + ++        R+  
Sbjct: 155 ALSTQQQQNKAGELEKQAQIDQAQQNLDNLKTTYNLLESEKIAQLNQAEATLKNNQRAYK 214

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN-----------------DLNQ 218
           L ++ + N    ++    + ++ +     + EK  ++Q                   L +
Sbjct: 215 LAQIRVANSQREIKRYKEAWEEGIASEIQVVEKEDIAQEKQGNYEQSQSDVEQAKLRLAE 274

Query: 219 QERIVYKSTLELRENIH-------EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           Q+ I +KS  + + +I        EQ+  L+ +    + A L+    LK I  D    + 
Sbjct: 275 QQSIFHKSIKQAKSDIEQAELRLKEQQRSLQTLIHSNELARLKIEEQLKNIDTDTASLKA 334

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             A   S++  L+    Q+T+ +P++G I       +    Q    + +I        +R
Sbjct: 335 EIALSKSQIQSLQFQLSQRTLKAPVSGVIFQLPIQQAGAVVQPGTRVAEIASQKTPLILR 394

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A++   +   +KKG    ++F  Y     +  +  + +I P  SQ D      E Y++ +
Sbjct: 395 AQMPTTESGSLKKGLPVKIKFDAYPYQDYELVEGKLLEISPTTSQIDTAKGKVEVYKLEI 454

Query: 392 KITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +        N  + LR G  A      +   +   ++ P 
Sbjct: 455 VLAQTCVKTANQCVALRPGDTATAEVIVRQRRIIDFVLDPF 495


>gi|288963183|ref|YP_003453462.1| hypothetical protein AZL_f01580 [Azospirillum sp. B510]
 gi|288915435|dbj|BAI76918.1| hypothetical protein AZL_f01580 [Azospirillum sp. B510]
          Length = 465

 Score =  192 bits (489), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 56/402 (13%), Positives = 130/402 (32%), Gaps = 19/402 (4%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            ++  V + G+I +++  V ++   + +IK   V  G  +  G  L T +       +  
Sbjct: 72  KLDRIVVAPGKITSQEATVFVQPLDTVMIKSVNVRAGDIVKPGDILATLDPTFAQADVGQ 131

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + ++   +                LE  +  R     D   +  +    ++    +
Sbjct: 132 LEARLASVDAQVAR--------------LEAEYNDRPYTPADAKDRNAALQFGLWRERQA 177

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                L+    ++  +  + +  E   S L   L   ++   M  +L      S+ ++  
Sbjct: 178 QFRAQLQSYAEKIARVKASIVKNETDRSHLAERLKVVREIEGMRSSLAASQTGSKLNMLY 237

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                      L  N +E       +  LY + ++   N+      +L + +        
Sbjct: 238 ATNDRIDIERTLVYNENELAANQHELKSLYADQDVYVQNWKSSAIEELVKQRTESDSLRE 297

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFS-SSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +L+   K  +   + +P    ++     +   + AQ  + L K+ P          +  +
Sbjct: 298 QLSKARKREDLVKLEAPTDAVVLEVSPKTSVGSMAQPGEALFKLFPLGGGLETEITIDAR 357

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ--TQEYYEVILKITD 395
            +  V+ G T  ++   Y        + ++E I        NN Q  TQ +Y   +++T 
Sbjct: 358 DLAFVQVGDTVQIKLDAYPFTDHGALEGVVETISQDAFTDRNNPQTGTQPFYRARVRLTK 417

Query: 396 LAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
                   +  L  G P +         +    + PI     
Sbjct: 418 TELRNVPAHFRLIPGMPLKADIKVGERRVISYFLRPILRGLN 459


>gi|58039183|ref|YP_191147.1| HlyD family secretion protein [Gluconobacter oxydans 621H]
 gi|58001597|gb|AAW60491.1| HlyD family secretion protein [Gluconobacter oxydans 621H]
          Length = 486

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 66/446 (14%), Positives = 141/446 (31%), Gaps = 32/446 (7%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H     L         R  +L I G+    +      PI   VS+ G +++    + ++ 
Sbjct: 46  HSPTAGLVNLPATPAARYIILLIGGLFLACLAVMAFFPINRVVSTPGRLISTQPTIVVQP 105

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + II+   V  G  + +G  L   +   T   I    +     +   D  K+     +
Sbjct: 106 LETSIIRSIDVHVGDFVKKGDVLAHLDPTITEADITNMHLQRDAYQAEYDRLKAEAAGQD 165

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              ++ + A     EQ   F+ +     + V NY      + +    + ++    N    
Sbjct: 166 YHVNLNDPAS---VEQGAAFMRRKTEYQAHVENYA-----QQIASLESDIQGYRANAAMY 217

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            +K  +   +L   Q++             +Q +L + ER       E+        +  
Sbjct: 218 GSKMRVASEVLQMRQREQADQVGSRLSTLGAQTELMEAER------AEIAAQQS-ANSAE 270

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           + +  +  E +    N+  +I  DL +     A+  S        ++   + +P  G ++
Sbjct: 271 KKLAAMKAERDGYIGNWQAKIYSDLTEAGHHLAEYRSAYEKARLRQDLVLLRAPEDGIVL 330

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                S  +  Q +   + +VP      + A +  + +  V+ G  A ++F  +   +  
Sbjct: 331 TIAQGSVGSVLQSAGQFITLVPTGYGLEMEAVLRSQDVGFVQVGDHALLKFVTFPYDQYG 390

Query: 362 KFKAIIEKIDPIISQQD--------------NNLQTQEYYEVILKITDLAFSDNN--IEL 405
             +A +  I                      ++      Y V L+I              
Sbjct: 391 GAEATVRVISADAFTPSSQNGSGGANGSGAADDTTASGVYRVRLRIDRYTLHGQPSFFHP 450

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPIT 431
             G            T+ Q + + IT
Sbjct: 451 MPGMSLTADIDVGKRTVLQYLFNRIT 476


>gi|288963209|ref|YP_003453488.1| protein secretion protein [Azospirillum sp. B510]
 gi|288915461|dbj|BAI76944.1| protein secretion protein [Azospirillum sp. B510]
          Length = 498

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 48/436 (11%), Positives = 139/436 (31%), Gaps = 33/436 (7%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P   +    +    ++ L+ W+    ++  +++ G ++    +V  +   + +++   
Sbjct: 68  PLPRPARSTLYVLAGLLVVLVLWAGFAQVDRIITAGGRLVTTAPLVVAQPLETAVVRGVD 127

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G ++  G  L T +       +      + ++       ++ LD  +        A 
Sbjct: 128 VQVGDRVRAGDRLATLDPTFAAADLADLTAKLASIEAQTGRLRAELDGGDFTPADTPDA- 186

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                          +  + +     +     L     +   +           + L   
Sbjct: 187 ---------------AVQAAILERRRAEYRSRLASLDEKAGQLDSAIAASRRAQAGLAER 231

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+   +   + + L E+   S+ +  +      +   EL      ++     +  +  + 
Sbjct: 232 LAVVGEVEDIRRQLQERQTGSRLNWLEARIERLRLRDELAAQQDRERASAHELRGVQADR 291

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                 + ++ + +L +  R  A  + ++   E+ R   T+ +P+   ++     S  + 
Sbjct: 292 AAFIDEWRRKTAEELVEQTRQRATLVEQVAKAERRRSLVTLTAPVDAVVLEVAKRSVGSV 351

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            ++++PL+ +VP      + A++  + I  V+ G    V+   +   R       I  I 
Sbjct: 352 VREAEPLVTLVPADVPLEVEAEIPSRDIGLVRVGDVVRVKLDAFPFQRHGTLPGEIRTIS 411

Query: 372 PI---------------ISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVL 414
                            +S           +   +++  T L    +   L  G  A   
Sbjct: 412 ADAFTHDAAQGGVQGAGVSPDSPRPMAGAVFRARIRLTATRLEEVPDGTRLSPGMVASAE 471

Query: 415 FTAKNTTLAQEIIHPI 430
                 ++    ++P+
Sbjct: 472 IRVGTRSILSYFLYPV 487


>gi|172037591|ref|YP_001804092.1| HlyD family secretion protein [Cyanothece sp. ATCC 51142]
 gi|171699045|gb|ACB52026.1| HlyD-family secretion protein [Cyanothece sp. ATCC 51142]
          Length = 577

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 64/466 (13%), Positives = 163/466 (34%), Gaps = 46/466 (9%)

Query: 7   KNLKRNHPASLKRMTLLS-IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + L    PA+L +  +L  +   +    W+    +E    + G+++ E    +I+    G
Sbjct: 106 QTLLDQPPATLPQKFILGGMAFCLAFGAWAWFGTLEEVGKAQGKLVPEGETYKIQPVELG 165

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +    VE G ++  G  L+ F+       ++  +  ++     +  +++  + +  +  
Sbjct: 166 KVTDIAVEEGQEVQAGQLLVEFDTELAQKEVNRLQEMLRAYETELSQKQTLQERIELEAK 225

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             + A  S E Q    +  +           ++           R + +       + + 
Sbjct: 226 T-DAAIASAELQAQQAVIAHTKEKIATVRQLLAQQQNEATAYQLRQKQLQPLATLAQQRL 284

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL--------------- 230
           + L+A   +HQ+ +  +K L E+ A+SQ  L + E+ + ++  ++               
Sbjct: 285 NQLQAEKVAHQERINRLKPLQEEGAISQEYLYEAEQTLRQTEQQIISSQLQEVTQANEQI 344

Query: 231 ---RENIHEQKNM---------------------LRHINELYDEANLEFANYLKEISRDL 266
               + I + ++                      L           +E    ++++  ++
Sbjct: 345 FQGNQGIRDLRSQMTENQGELFLAQQTVQQAQAELTQKQGQAQRKQIEAMQKIQQLEVEM 404

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            Q Q    +  + L   +   + K + +PI+GTI+     ++    +  Q + +I PH+ 
Sbjct: 405 TQLQGKITENKNLLIAAQSKLQYKYLKAPISGTILSLDLKNTGEVIEAGQTVAEIAPHNV 464

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A +  ++   V KG    V+   Y           +  I       +++ +  E 
Sbjct: 465 PLVVSAVLPNEEAGFVNKGMPTQVKLDAYPYQDYGVITGEVTAISADA---ESDEKLGEI 521

Query: 387 YEVILKITDLAFSDNNIEL--RNGFPAEVLFTAKNTTLAQEIIHPI 430
           Y V +++       N   +  + G         +   +   ++ PI
Sbjct: 522 YRVEIELERDHILKNQERIAFKPGQTVTADIIIRRRRIIDVLLDPI 567


>gi|33591936|ref|NP_879580.1| cyclolysin secretion protein [Bordetella pertussis Tohama I]
 gi|34978352|sp|P11091|CYAD_BORPE RecName: Full=Protein CyaD
 gi|33571580|emb|CAE41068.1| cyclolysin secretion protein [Bordetella pertussis Tohama I]
 gi|332381353|gb|AEE66200.1| cyclolysin secretion protein [Bordetella pertussis CS]
          Length = 440

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 62/424 (14%), Positives = 143/424 (33%), Gaps = 42/424 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +R    + + +  + +    G + WS++   EI V ++G+++       I +  +G + 
Sbjct: 46  QERPISPTARWLARILMALAAGALVWSVVGKTEIVVHAAGKVVPVGQSKIIAASETGRVA 105

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V + S++  G  LL  +   T    + +K  ++  +   D  +S          ++ 
Sbjct: 106 RVLVADNSRVAAGDVLLRLDAGVTEA--EERKWRVQAAQARQDEARSRA--------MIR 155

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                R   L +         ++ +               ++          +E   +  
Sbjct: 156 ALDTGRAPVLAELPADPGMMAAQSYLD-------------SQYADYQAQLRSIEAAIATY 202

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L    +     + L     VSQ    ++E+        LR++  ++  +        
Sbjct: 203 RRELGLVTQIAHAHRGLRRDGDVSQQAYLEKEQARMTLEGRLRQSEAQRAALQTQTRRQA 262

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E               L   ++  A    ++      R +  + +P+ G +    + + 
Sbjct: 263 FET--------------LVLARKLAAQAEQEIARTSAQRSRLVLTAPVDGVVQQLVALTE 308

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP      ++A++  K I  V+ G  ATV+   Y   +    +  + 
Sbjct: 309 GTAVAATQPLMMVVPSGAGIQVQAQLDSKDIGFVRAGAPATVKVGAYDYTKYGTLEGKVL 368

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEI 426
            + P     D     Q  Y V + +   A   +     L+ G   +      +  L + +
Sbjct: 369 YVSPDTVVDDR---QQHSYRVTIALAHPALEVDGKPRLLKEGMAVQADIRTGSRRLIEYL 425

Query: 427 IHPI 430
           + P+
Sbjct: 426 LSPV 429


>gi|91790748|ref|YP_551699.1| secretion protein HlyD [Polaromonas sp. JS666]
 gi|91700628|gb|ABE46801.1| secretion protein HlyD [Polaromonas sp. JS666]
          Length = 349

 Score =  190 bits (484), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 85/301 (28%), Gaps = 32/301 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +Q+L   G   +    V     +    +L      +  + +    L              
Sbjct: 74  DQMLVKEGDTVTEGQLVARLNTTQATANLNASRETVLGLQMQIRGLRASRESKVLQARLL 133

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            + +  + +L     V +N L + +R   +    + E+        R IN          
Sbjct: 134 GQQIGGLDDLVRDGFVPRNRLLELQRQAAQLQGGMAEDEGNLGRAERQIN---------- 183

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                              +   +L   E       + +  AG +     F+        
Sbjct: 184 -------------------EIQQRLVAYEFEIANAAVKTTAAGVVQGLTVFNPGAVIGPG 224

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L +IVP      +  +V    I  V  G    + F  +         A +  + P   
Sbjct: 225 HKLFEIVPQGVALVVEGQVPTHLIDRVAPGLGVELMFTAFNQASTPHIPAHVTLVSPDRF 284

Query: 376 QQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
             +       Y+++  ++T    +    + LR G P E+       TL   +  P+ D +
Sbjct: 285 VDER--SGTPYFKLKAEVTPEGMAMLTGLSLRPGMPVELFIKTGERTLMNYLFKPLLDRF 342

Query: 435 P 435
            
Sbjct: 343 H 343



 Score =  123 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 80/201 (39%), Gaps = 11/201 (5%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           MH       +R      +   L+ ++G+ G + W+ + P++  V  SG ++++ N   ++
Sbjct: 9   MHDL--TPSQRPVAGYTRLGWLVVLLGVGGFLLWASIAPLDKGVPVSGTVISDGNRKSVQ 66

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
            P  GI+ +  V+ G  + +G  +      + T  ++  + ++  L+  I   +++ +  
Sbjct: 67  HPTGGIVDQMLVKEGDTVTEGQLVARLNTTQATANLNASRETVLGLQMQIRGLRASRESK 126

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +  +L +     ++ + D           V    +  + R        M     N   
Sbjct: 127 VLQARLLGQQIGGLDDLVRDGF---------VPRNRLLELQRQAAQLQGGMAEDEGNLGR 177

Query: 181 LENKSSLLRALLSSHQKDLTM 201
            E + + ++  L +++ ++  
Sbjct: 178 AERQINEIQQRLVAYEFEIAN 198


>gi|291544217|emb|CBL17326.1| Multidrug resistance efflux pump [Ruminococcus sp. 18P13]
          Length = 413

 Score =  190 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/431 (16%), Positives = 158/431 (36%), Gaps = 51/431 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R    +   + L     +I  + W+ L  I++ V+SSG +    N+  ++S   G+++
Sbjct: 32  IERPAHKAGTVIILGVFTLLIAAVIWACLSKIDVVVTSSGSVQPIGNLNVVQSYAGGVVE 91

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              +E G  +  G  L+   + ET D+ +            + ++K  L+     Y  ++
Sbjct: 92  AINIEEGEYVQAGDVLIHL-NTETLDVDEK----------QLQSQKKILEEQQKIYQKIK 140

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              +    ++ D+  +       + +   S  Y++    L + +S      DL  +   L
Sbjct: 141 AGEDVSAIKVSDYDAELQPYIQAILDADTS--YKNTLANLEKEKS----NADLNQQIGQL 194

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +                          L + +    +   E ++ I++Q  +   + +  
Sbjct: 195 Q--------------------------LEEYQANGTEREAESQKLINQQYAL--AVEQAD 226

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            + N     Y  +I+  + +N     +  S L   + +   + I +P++G +      + 
Sbjct: 227 LQINDTKTQYSAQINSKISENDTQLIEIESNLEKYQLSIAYQDITAPVSGYVNSISVNTI 286

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +Q L+ IVP      +   V    I  V++G TA ++   Y   +       ++
Sbjct: 287 GETVTSAQELVTIVPDDTSVEMVCYVQNMDIADVEEGMTAEIKLEAYPYNKFGTVSGTVK 346

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I P       + Q    Y V L+I +   S+  I + +G    V       T+ +  + 
Sbjct: 347 YISPSSF---VSEQLGSVYLVKLEIEN---SNEEIHVISGLSGTVEIKTDKRTVMEYFLD 400

Query: 429 PITDNWPKIFE 439
           PI   + +  +
Sbjct: 401 PIIKGFGESLK 411


>gi|148260890|ref|YP_001235017.1| HlyD family type I secretion membrane fusion protein [Acidiphilium
           cryptum JF-5]
 gi|326404287|ref|YP_004284369.1| HlyD family secretion protein [Acidiphilium multivorum AIU301]
 gi|146402571|gb|ABQ31098.1| type I secretion membrane fusion protein, HlyD family [Acidiphilium
           cryptum JF-5]
 gi|325051149|dbj|BAJ81487.1| HlyD family secretion protein [Acidiphilium multivorum AIU301]
          Length = 476

 Score =  190 bits (482), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 51/434 (11%), Positives = 124/434 (28%), Gaps = 31/434 (7%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +   LL    +  LI  + ++ I   VS+ G +++    V ++   + I++   V  G  
Sbjct: 56  RYTMLLVTALVATLIAVAAVVRIPKVVSAPGRLVSTAPNVLLQPFDTSIVQAIDVHEGEI 115

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L        +  +      +  L    D   +              A       
Sbjct: 116 VHKGEILAKLNPTFASANLRALSAEVIQLAARRDRLAAEAGGTTYAPAHPNAA------- 168

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                       + +F    +    +++    ++  + +     ++++   R  +   + 
Sbjct: 169 --------QRLQAAIFQSRKAERIYTIENYDQKIAELRMIIAKSDSEAGFYRKQVGVAKD 220

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
              M   L      S+ +           +  L   +       R +     E +     
Sbjct: 221 VEHMRDQLQRMQVGSKLNSLLARNDRLTVSSSLSSALATAAAGERDLAAQQAERDAYEKK 280

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           ++ ++   L +           L       +   + +P    ++     S  +  +    
Sbjct: 281 WIADVGEKLAETDSKLIATEQDLAKARLQSQLVVMRAPRDAIVLTVAHVSVGSVLRSGAK 340

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            + +VP      + A ++  +  HV  G   TV+F  +  +R    +  +  +       
Sbjct: 341 FITLVPLDAPLEVEADISGAESGHVHVGDPVTVKFATFDYLRYGTARGTLRSVSADSFSS 400

Query: 378 DNNLQTQE----------YYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQE 425
           D                 YY+  + I  L       +  L  G P          T+   
Sbjct: 401 DQPPAEGASPLPNRPRGLYYKARISIDRLMLHGVPPSFRLTPGMPLTADIKTGRRTILSY 460

Query: 426 IIH---PI-TDNWP 435
            +    P+ TD+  
Sbjct: 461 FMTKLLPVATDSMR 474


>gi|218680844|ref|ZP_03528741.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           etli CIAT 894]
          Length = 157

 Score =  189 bits (481), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 63/156 (40%), Gaps = 3/156 (1%)

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
               +  I +P++G +      + +      + LM +VP ++   + AKV  + I  V  
Sbjct: 2   DQLRRLDITAPLSGRVHELSVHTVNGVVNPGETLMLVVPENEDLTVEAKVATRDIDQVHV 61

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNI 403
           G +  VRF  +        +  I  I P I + +       YY + +K    + +    I
Sbjct: 62  GQSVDVRFSAFDQRTTPDVRGEITSIAPDIVKDERT--GISYYPLRVKPEAASIAKLKAI 119

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +L  G PAEV     + T+   +  P+TD    +F 
Sbjct: 120 KLYPGMPAEVFIKIADRTVISYLTKPLTDQMQHVFR 155


>gi|218516625|ref|ZP_03513465.1| putative protein secretion protein, HlyD family [Rhizobium etli
           8C-3]
          Length = 238

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 95/236 (40%), Gaps = 3/236 (1%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L  K    +N L   +R       +  E   +     + I+    +     ++ L EI++
Sbjct: 3   LSAKGLERKNRLLNLQREKADLDGQQGEVAAQISRAYQVISGAQADLAKLESDRLSEIAQ 62

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            +   +        +L  ++    +  I +P  GTI+  +  +S       +PL+ ++P 
Sbjct: 63  GMRDTEGRIMQLRERLRAIDDQLSRTDIRAPEDGTIMNLRVHTSGGVIGAGEPLVDLLPR 122

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           S    +   V P+ I  V+ G  A V    Y   R    K  +E +     +  +    Q
Sbjct: 123 SDRLIVSVHVRPEDINLVRAGLEAQVHLLPYNQRRVPLLKGRVEYVSAD--RLIDTQTGQ 180

Query: 385 EYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            Y+   +++TD   +  +++EL  G PA+ L     +++A   + P+ D++ + F 
Sbjct: 181 PYFAATIRVTDERLAKMSDVELVAGMPAQTLIETGESSVAFYAVRPLLDSFNRAFR 236


>gi|39734|emb|CAA32413.1| cyaD [Bordetella pertussis]
          Length = 440

 Score =  189 bits (481), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 61/424 (14%), Positives = 143/424 (33%), Gaps = 42/424 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +R    + + +  + +    G + WS++   EI V ++G+++       I +  +G + 
Sbjct: 46  QERPISPTARWLARILMALAAGALVWSVVGKTEIVVHAAGKVVPVGQSKIIAASETGRVA 105

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V + S++  G  LL  +   T    + +K  ++  +   D  +S          ++ 
Sbjct: 106 RVLVADNSRVAAGDVLLRLDAGVTEA--EERKWRVQAAQARQDEARSRA--------MIR 155

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                R   L +         ++ +               ++          +E   +  
Sbjct: 156 ALDTGRAPVLAELPADPGMMAAQSYLD-------------SQYADYQAQLRSIEAAIATY 202

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  +    +     + L     VSQ    ++E+        LR++  ++  +        
Sbjct: 203 RRDVGLVTQIAHAHRGLRRDGDVSQQAYLEKEQARMTLEGRLRQSEAQRAALQTQTRRQA 262

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E               L   ++  A    ++      R +  + +P+ G +    + + 
Sbjct: 263 FET--------------LVLARKLAAQAEQEIARTSAQRSRLVLTAPVDGVVQQLVALTE 308

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP      ++A++  K I  V+ G  ATV+   Y   +    +  + 
Sbjct: 309 GTAVAATQPLMMVVPSGAGIQVQAQLDSKDIGFVRAGAPATVKVGAYDYTKYGTLEGKVL 368

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEI 426
            + P     D     Q  Y V + +   A   +     L+ G   +      +  L + +
Sbjct: 369 YVSPDTVVDDR---QQHSYRVTIALAHPALEVDGKPRLLKEGMAVQADIRTGSRRLIEYL 425

Query: 427 IHPI 430
           + P+
Sbjct: 426 LSPV 429


>gi|332705569|ref|ZP_08425645.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
 gi|332355361|gb|EGJ34825.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
          Length = 544

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 61/468 (13%), Positives = 154/468 (32%), Gaps = 46/468 (9%)

Query: 7   KNLKRNHPASL-KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +NL    P+ L +R+ L      +    W+    I+    ++G+++ +  V +I    SG
Sbjct: 73  QNLLDQPPSVLPQRLLLGGFAFCMVCGVWATFGQIDEVGKATGKLVPKGEVYKIHPIQSG 132

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + K  V+ G  +  G  L+  +       ++  +  I   +  +   +  ++ ++ +  
Sbjct: 133 KVAKIAVKEGESVTAGQVLVELDKELGATEVERLEQLINADQIKLIQMQGLIENIHQEAQ 192

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
              +     +            T        +    ++      R+  +   +   +   
Sbjct: 193 T-RQQIAKADIDAQQAAIAQAQTKVAALREQLIQHQQANVASQDRLERLKRLKATTQALL 251

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST------------------ 227
              +    + ++ L  +K L    A+S+  + Q E  +  S                   
Sbjct: 252 QQRQDDAFALKERLENLKPLLASGAISKEQVFQAEHSLRASQRVITQTQLQEAASNQDQI 311

Query: 228 ------------------LELRENIHEQKNMLRHINELYDE---ANLEFANYLKEISRDL 266
                              +L + + E + +   + +   E     LE    L+++  +L
Sbjct: 312 YQAQQSIRDRNSAITLTHSDLNQTLAEIQRLQAGLTQKQAEVHRTQLETKQKLQQLEIEL 371

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            Q     A+  + LT  +   +QK + +P+ G +      +     Q  Q + ++ P   
Sbjct: 372 TQLNAKIAENRNLLTSAKARLKQKFLYAPVDGVVSSLNVANIGEVFQPGQTIAEVAPQDA 431

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A +  ++   +K+G    ++   Y        K  +  +           Q    
Sbjct: 432 PLVLSASLPNQEAGFIKEGMPVQIKLDAYPYQEYGIIKGKVTSLSADAKTD---QQLGSV 488

Query: 387 YEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           YEV + +     ++++  I  + G  A+     +   +   ++ PI  
Sbjct: 489 YEVEVSLNRDYVTEDDQMIRFKPGQTAKADIIIRRRRIVDFLLDPIRQ 536


>gi|110680878|ref|YP_683885.1| leukotoxin secretion protein D, putative [Roseobacter denitrificans
           OCh 114]
 gi|109456994|gb|ABG33199.1| leukotoxin secretion protein D, putative [Roseobacter denitrificans
           OCh 114]
          Length = 395

 Score =  189 bits (480), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 54/406 (13%), Positives = 134/406 (33%), Gaps = 19/406 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +     +SG ++      +I++P SG +    V  G  +  G  L          
Sbjct: 4   AASTVVPELTRASGALVPTGRYHQIQAPESGTVVSVHVHEGQVVQTGDVLAELSSASLDQ 63

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           L    +  +  +   +   ++ +  +       E      E +  D   +   +  +   
Sbjct: 64  LEQNLRQELLAIETKVKNFQAIIAGVTTDNPTTEPLSNP-EMEFADTQLQLFESRQRAQK 122

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             I+ +  +L                LE    L    + +    +   ++LF K   +  
Sbjct: 123 ELITRLEETLAT--------------LERARKLAEKRVIAKTLSVQKDEDLFNKGLTTSR 168

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           DL+ Q+  + +    L +       + + ++           +  ++ +  L + +    
Sbjct: 169 DLDAQKDRLDQLQARLVDVDVRLSQLQKEVSLSQSSVVQNRLSMEEKYTEKLFELELQRE 228

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
               +L  + + R++  + SP  G +      +          L +++P  +      +V
Sbjct: 229 ALKGQLETVVQQRDKLKLRSPANGVLHAIGFPNPGEIVNVGDVLFELLPTQQSLVAEIEV 288

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
            P  I HV  G    ++F  +   R  + +  I  I P      +    QE++   + + 
Sbjct: 289 NPSDIGHVSTGDPVALKFDTFDPRRYGQVEGEIISISPNSVMDSDT--GQEHFRATVALG 346

Query: 395 DLAFSDN--NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           + +  +     +L++G  A         T+   ++ PI+ +    F
Sbjct: 347 NASIGEGVWQRDLKSGMTATAEIVTDERTVLAYLLKPISRSLENAF 392


>gi|33599315|ref|NP_886875.1| cyclolysin secretion protein [Bordetella bronchiseptica RB50]
 gi|33575361|emb|CAE30824.1| cyclolysin secretion protein [Bordetella bronchiseptica RB50]
          Length = 440

 Score =  189 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 61/424 (14%), Positives = 142/424 (33%), Gaps = 42/424 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +R    + + +  + +    G + WS++   EI V ++G+++       I +  +G + 
Sbjct: 46  QERPISPTARWLARILMALAAGALVWSVVGKTEIVVHAAGKVVPVGQSKIIAASDTGRVA 105

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V + S++  G  LL  +   T    + +K  ++  +   D  +S          ++ 
Sbjct: 106 RVLVADNSRVAAGDVLLRLDAGVTDA--EERKWRVQAAQARQDEARSRA--------MIR 155

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                R   L +         ++ +               ++          +E   +  
Sbjct: 156 ALDTGRAPVLAELPADPGMMAAQSYLD-------------SQYADYQAQLRSIEAAIAAY 202

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L    +     + L     VSQ    ++E+        LR++  ++  +        
Sbjct: 203 RRELGLVTQIAHAHRGLRRDGDVSQQAYLEKEQARTTLEGRLRQSEAQRAALQTQTRRQA 262

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E               L   ++  A    ++      R +  + +P+ G +    + + 
Sbjct: 263 FET--------------LVLARKLAAQAEQEIARTSAQRSRLVLTAPVDGVVQQLVALTE 308

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP      ++A++  K I  V+ G  A+V+   Y   +    +  + 
Sbjct: 309 GTAVAATQPLMMVVPSGAGIQVQAQLDSKDIGFVRAGAPASVKVGAYDYTKYGTLEGTVL 368

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            + P     D     Q  Y V + +    L        L+ G   +      +  L + +
Sbjct: 369 HVSPDTVVDDR---QQHSYRVTIALAQATLEVDGQPQRLKEGMAVQADIRTGSRRLIEYL 425

Query: 427 IHPI 430
           + P+
Sbjct: 426 LSPV 429


>gi|239908395|ref|YP_002955137.1| putative type I secretion system [Desulfovibrio magneticus RS-1]
 gi|239798262|dbj|BAH77251.1| putative type I secretion system [Desulfovibrio magneticus RS-1]
          Length = 455

 Score =  187 bits (476), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 51/445 (11%), Positives = 140/445 (31%), Gaps = 27/445 (6%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            +    P    R+ +  I   +     W+    ++  VS+ G ++     + ++   + +
Sbjct: 19  AVSEGEPPVQARIAVYVIFACLVFGGLWAWFSELDRVVSAGGMLVTRVPPIVVQPLETAV 78

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  V  G  + +G  L T +    +          + L   +    + LD       +
Sbjct: 79  VRQINVRPGDVVRRGAVLATLDPTFASADFGQLAAKRRFLSAFVVLLAAELDGRPLPA-L 137

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E A +  E+          +   + F   + +  R + +    + +    R+ L  +++
Sbjct: 138 DESAMDGEEK----VRLTLFAMRKEEFRAKVEANDREVALLEDAVAANAAERMRLGEQAN 193

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           L + +     K       L      S+ +     R   +      +   +++ ++  ++ 
Sbjct: 194 LAKEIEGMFGK-------LVPGGGASRLEYLGALREKLRVDDLAAKTEEKREQLVEQLSR 246

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              E     +N+  + +  L + ++   +    L    +  E   + +     +      
Sbjct: 247 AKMERQAFVSNWRAQTATQLLEARQNLDEVDHSLAKASRRSELVELSAVADAIVKEVAPL 306

Query: 307 SSSNYAQQSQPLMKIVPHSK---LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           S  + A+ ++    +VP             +    I H++ G    ++   Y   R    
Sbjct: 307 SEGSIAKAAETFCVLVPIGDADGALEAEVSIAAADIGHIRVGNETRLKLAAYPFQRHGFL 366

Query: 364 KAIIEKIDPIISQQDNNLQTQE---------YYEVILKITDLAFSD--NNIELRNGFPAE 412
             ++  + P     +      E         +Y+  +++T     D   +  L  G    
Sbjct: 367 DGVVRMVSPDAFVAEGAAPGHEGGQDGVGGVHYKARIRLTRTTLRDVGPDFRLLPGMTVS 426

Query: 413 VLFTAKNTTLAQEIIHPITDNWPKI 437
                    +A  I+ P+     + 
Sbjct: 427 AEILVGKRRVATYILDPVIRGLHEA 451


>gi|85713622|ref|ZP_01044612.1| type I secretion membrane fusion protein, HlyD [Nitrobacter sp.
           Nb-311A]
 gi|85699526|gb|EAQ37393.1| type I secretion membrane fusion protein, HlyD [Nitrobacter sp.
           Nb-311A]
          Length = 449

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 55/430 (12%), Positives = 142/430 (33%), Gaps = 15/430 (3%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSS-SGEILNEDNVVEIKSPFSGIIKKFQ 71
            P   +    +    +I ++    L  ++  ++S +G I+   +V  +++    IIK   
Sbjct: 26  EPLVARVTLFVLTAFLISIVAILCLTRVDRVITSLNGNIVPVGHVNVLQALDPSIIKTID 85

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+  G  L T +   T+  +   K+ I +L      +++ L          ++  
Sbjct: 86  VREGEQVKPGQLLATLDSTFTSADLTQAKLQIASLEAQAARDEAELK---------QQPL 136

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              +    DF  KY +  + ++   ++     L    +++R        L +  +  R  
Sbjct: 137 VFPDNPDPDFR-KYAALQNALYKQRVAQYQAQLNSFESKIRETKATIEKLRDDDARYRQR 195

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                K   M   L E+   SQ ++   +    +    L    +        +  +  + 
Sbjct: 196 DEILAKIENMRTTLAERGTGSQLNMYISQDARLELLRTLENAHNGLIVAQNTLGAITADR 255

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           +     +  ++S+DL   +    +  +      K ++     +     ++     S  + 
Sbjct: 256 DAFKEQWFAQLSQDLVTTRNKLDEARATYEKALKHQDLVRWTAAEPSVVLTIARLSVGSV 315

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +   P + ++P         +++ + +  V+ G   T++   +           +  I 
Sbjct: 316 LKPGDPFITLMPIDTKLEAEIRISSRDVGFVRAGDPCTMKVDAFNAAEHGTASGKVRWIS 375

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEII 427
                +  D       YY+    +    F    +N  L  G   +      + ++A  ++
Sbjct: 376 EGAFTTDDDGKPLEYTYYKARCSVDASNFKGVPSNFRLIPGMTLQGDINVGDRSVAMYLL 435

Query: 428 HPITDNWPKI 437
             +     + 
Sbjct: 436 GGMLKGMSEA 445


>gi|92116631|ref|YP_576360.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
 gi|91799525|gb|ABE61900.1| Type I secretion membrane fusion protein, HlyD [Nitrobacter
           hamburgensis X14]
          Length = 449

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 63/437 (14%), Positives = 147/437 (33%), Gaps = 29/437 (6%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSS-SGEILNEDNVVEIKSPFSGIIKKFQ 71
            P   +    +    ++ ++    L  I+  ++S SG I+   +V  +++    IIK   
Sbjct: 26  EPLVARATLFVLSAFLVSIVAILCLTRIDRVITSLSGRIVPVGHVNVLQALDPSIIKTIN 85

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+  G  L T +   T+  +   K+ + +L      +++ L          ++  
Sbjct: 86  VREGEQVETGQLLATLDATFTSADLTQAKLQVASLEAQAARDEAELK---------QQPL 136

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              +    DF  KY +    ++   ++     L    ++++        L +  +  R  
Sbjct: 137 VFADNPDPDFQ-KYAALQKALYGQRVAQYTAQLNSFESKIKETQATIEKLRDDDARYRQR 195

Query: 192 LSSHQKDLTMMKNLFEKN-------AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               QK  TM   L E+         +SQ+   +  R +  +   L     E KN L  I
Sbjct: 196 DEILQKIETMRTTLAERGTGSRLNMYISQDARLELLRTLENAHNGL----IEAKNTLGSI 251

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               D    +   +  ++S+DL   +    +  +      K +      +     ++   
Sbjct: 252 TADRDAFKQQ---WFAQLSQDLVTTRNKLDEARATYEKALKHQNLVRWTAADPSVVLTMA 308

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             S  +  +   P + ++P         +++ + +  ++ G   T++   +         
Sbjct: 309 RLSVGSVLKPGDPFITLMPIDTKLEAEIRISSRDVGFIRAGDPCTMKVDAFNAAVHGTAS 368

Query: 365 AIIEKID--PIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNT 420
             +  I      +  D       YY+    +    F D  +N  L  G   +        
Sbjct: 369 GNVRWISEGAFTTDDDGKPLDYTYYKARCSVDASNFKDVPSNFRLIPGMTLQGDINVGTR 428

Query: 421 TLAQEIIHPITDNWPKI 437
           ++A  ++  +   + + 
Sbjct: 429 SVAMYLLGGMLKGFHEA 445


>gi|332712107|ref|ZP_08432035.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
 gi|332348913|gb|EGJ28525.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
          Length = 533

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 62/463 (13%), Positives = 161/463 (34%), Gaps = 46/463 (9%)

Query: 12  NHPASLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
             PA+L R+ +L  +      + W+    I+    + G ++ + +V ++     G I   
Sbjct: 67  QPPANLPRLLMLGGLSFCTIFVAWATFGQIDEVGKAHGSLVPKGDVYKVDPIEPGKIASI 126

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +V+ G  +  G  L+  +    T  ++  +  +   R  +   +  L+    + +  E+ 
Sbjct: 127 KVKEGQAVKAGEVLVELDTELATQEVERLEKVLNADRIRLVQMQGLLERTRLEVETREQI 186

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            ++  +     + +  ++ S +    I     +      R++ + L +   +      RA
Sbjct: 187 TQAEVQAQQASIARAQASASAI-RQQIIQHQLAKAANRERLQRMKLVQATAQELLQQRRA 245

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDL---------------------------------- 216
            + + ++ L  +K L  + A+S+  +                                  
Sbjct: 246 NVVALKERLDNLKPLLAEGAISKEQVFQAEQSFRASQSAVTESKLQEGLSTREQIFQAQQ 305

Query: 217 --NQQERIVYKSTLELRENIHEQKNMLRHINELY---DEANLEFANYLKEISRDLEQNQR 271
               +E    +S  EL++ + E K +   +           LE    ++++  +L Q + 
Sbjct: 306 SIRDREAATSQSRGELQQTLAEIKRLEAELEHRQATGRTTRLEAQQKIQQLEVELTQIKA 365

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             ++  + +T  +   +QK + +P+ G I      ++    Q  + + +I P      + 
Sbjct: 366 RISENETLVTTAKTRLKQKFLKAPVDGIISSLNIGNAGEVVQPGRSIAEIAPQGAPLVLS 425

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A +  ++   + +G    V+F  Y        K  +  I         +      Y+V +
Sbjct: 426 ASLPTREAGFINEGMAVQVKFDAYPYQDYGIIKGTVISISSDA---KADQVMGSVYKVKV 482

Query: 392 KITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            +      + +  I  + G  A      +   +   ++ P+  
Sbjct: 483 SLDRDYVIEEDEIIRFKAGQTANADIIIRRRRIIDFLLDPMRQ 525


>gi|186683551|ref|YP_001866747.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186466003|gb|ACC81804.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 507

 Score =  187 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 64/465 (13%), Positives = 164/465 (35%), Gaps = 42/465 (9%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSP 62
              K+L  + P    R  L  +I  + +I  W++L  ++ + ++ G +  +   V + + 
Sbjct: 37  DATKDLLDSLPQVWTRGLLYFLIVFVSIILPWAMLSKVDETGTARGRLEPKGKTVRLDAA 96

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G + + +++ G  +  G  LL  E       +   +  ++     +    S L+   +
Sbjct: 97  VAGTVAEIRIKEGDSVKVGQTLLVLESELVKAELRQVQDKLEGQLNRL----SQLNSSKS 152

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V     + + +              +  N   +S       KL ++          +
Sbjct: 153 QLVVSLTTQQQQNQSQELEKQSQIDQARENMNALRNSYDLQKDEKLAQVNQARQTLEHSQ 212

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE--------------RIVYKSTL 228
             + L+ + L+S ++++   +NL++   V + ++ +++                + ++ L
Sbjct: 213 TANKLVNSSLTSTEREVERYRNLWQSGVVPEINVVEKQDIAKDKQQLYEQNKSDIQQAKL 272

Query: 229 ELRENIHEQKNMLRHINELYDEANL---------------------EFANYLKEISRDLE 267
            L E     +  +R  N   ++A L                     +     K +  ++ 
Sbjct: 273 RLLEQQSSYERTIRQANADIEQAELRLKEQERSYQTLTRSSKLAVLKIDEQQKSLETEIT 332

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             Q   A   S++  L+    Q+ + + + G +       + +  Q    + +I P    
Sbjct: 333 TLQAEIAQTKSQIVSLKFQLGQRELRATVNGRVFQLPIQRAGSVVQPGTMIAEIAPQGSP 392

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             IRA++   +   ++KG    ++F  Y        +  + +I P   + D        Y
Sbjct: 393 LIIRAQMATTESGFLRKGLPVKLKFDAYPFQDYGIVEGNLAEISPTTLEVDTPNGKVAAY 452

Query: 388 EVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           ++ + +    L  ++  I L  G  A      +   +   ++ P 
Sbjct: 453 DLEIALKQNCLLSANKCIALHPGDTATAEVIVRQRRIIDFLLDPF 497


>gi|254477941|ref|ZP_05091326.1| leukotoxin secretion protein D, putative [Ruegeria sp. R11]
 gi|214028526|gb|EEB69362.1| leukotoxin secretion protein D, putative [Ruegeria sp. R11]
          Length = 437

 Score =  186 bits (473), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 54/427 (12%), Positives = 138/427 (32%), Gaps = 15/427 (3%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     +  +    ++ LI  +    +     + G I+   +  +I+    GI+ +  V+
Sbjct: 21  PRFAALIATIFSGMVVALIVLAGRTDVPQITRAPGTIVPLGDYTQIEVMEGGIVDRVHVQ 80

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +G ++  G  L+             +   +   +  +  + +  D   ++   +  A ES
Sbjct: 81  DGDRVQAGDVLVEL-----------RHPDLTKEQQKLQEQITIADRKLSRAQTVLSALES 129

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                 D L    S         +     S ++K   +         LE         ++
Sbjct: 130 GVAITADRLEALRSLDQHRAAATLEIYAESQRVKSMSISQHQETLDILEASHKFTLERVA 189

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++L   + L ++   +  DL +    +        +           +     E   
Sbjct: 190 RKAEELERARQLHKQGLTTLRDLGRDADQLDALRTAASDGEVRLAETRSALTLARAELAE 249

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +     +E+  ++E+     ++    L I+++  E   I++P  G +      +      
Sbjct: 250 QTLTLREEMLDEIEELSDQRSELAVSLRIVDRKLEGLQIVAPSMGVVQSVAFPNEGEVIA 309

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             + + +++P      + A++   +I HV       +    Y   R  K +  +  + P+
Sbjct: 310 PGETIFELLPTRLDLMVEARIPNGEIGHVGVEQPVNLTVDTYDVRRFGKVQGRVTALSPV 369

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               +    T  Y+   +++   +    + E  L+ G       T    +L   ++ P+ 
Sbjct: 370 PLIDEQTGAT--YFRASIRLDGRSVGAGSFERPLQAGMTVVAEMTTGEKSLLAYMLKPVH 427

Query: 432 DNWPKIF 438
                 F
Sbjct: 428 QTMTNAF 434


>gi|218437416|ref|YP_002375745.1| secretion protein HlyD [Cyanothece sp. PCC 7424]
 gi|218170144|gb|ACK68877.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7424]
          Length = 504

 Score =  186 bits (473), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 71/465 (15%), Positives = 166/465 (35%), Gaps = 42/465 (9%)

Query: 4   FMWKNLKRNHPASLKRMTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  K L  + P    R  L   +I I   + W++   I+ +  + G++  +   + + +P
Sbjct: 34  YSTKELLDSLPKVWTRGLLYFLVIFITIALPWAMFSKIDETGKAQGQLEPKGKTIRLDAP 93

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG +   +V+ G ++  G  L+  E       + L+K  ++     +      LD L N
Sbjct: 94  VSGTVATIKVKEGEKVKVGQTLVELESDLVNADLQLQKNKLEGQENRL----HQLDILKN 149

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  ++ +    + +          +   +      ++ +   + KL ++     +    +
Sbjct: 150 QLQIVLQTQTQQNQAQKLEKLAQVNQAKQELEVLQNTYHLQQQEKLAQVNQAKQDLQHSQ 209

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
             + L    L + + +    +   E+  VSQ  + ++E ++ + T    +   + +    
Sbjct: 210 VDNHLAGIGLKTAEHEAQRYREAAEEGIVSQIQIVEKEDVIQERTRVYEQTKSDIEQAKL 269

Query: 243 HINELY-----------------------------------DEANLEFANYLKEISRDLE 267
            ++E                                     + A L+    LK +  D+ 
Sbjct: 270 RLSEQQSIYERTIKQTKSDIEKSKLRLKEQENSYNSLIQSGEIAILKVKEQLKNVETDVT 329

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +       S++  LE    Q+ I SP+ GTI         +  Q    +++I P    
Sbjct: 330 SLKSEIKQTKSQIQSLEFQLSQRVIKSPVEGTIFDLAVEREKSVLQSGNKIIEIAPQGTK 389

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +RA++  ++   ++KG    ++F  Y        +  + ++ P   + + +      Y
Sbjct: 390 LVLRAEMATQESGFLEKGMLVKMKFDAYPFQDYGIIEGKLSQVSPTTKKIETSDGETSAY 449

Query: 388 EVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           E+ +++    +  S   I LR G  A      +   L   I+ P 
Sbjct: 450 ELEIELDQTCIPSSKECIPLRPGDTATAEVVVRQRRLIDFILDPF 494


>gi|119513132|ref|ZP_01632184.1| hypothetical protein N9414_13947 [Nodularia spumigena CCY9414]
 gi|119462229|gb|EAW43214.1| hypothetical protein N9414_13947 [Nodularia spumigena CCY9414]
          Length = 515

 Score =  185 bits (471), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 64/465 (13%), Positives = 163/465 (35%), Gaps = 42/465 (9%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  + L    P    R  L  ++    +I  WS+L  I+ + S+ G +  +    ++   
Sbjct: 45  YGTEELLDALPKLWTRSMLYFLVIFTSIILPWSMLTKIDETGSARGRLEPKGATHQLGIS 104

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +K   V+ G+ +  G  LL  +       +  ++  ++ L       K   + L  
Sbjct: 105 VPGTVKAVNVQEGAMVKAGQVLLELDSDILEKELQQRQTQLQGLSDRQAQLKLLKNQLML 164

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             ++ E+  +++E + +  + +      +  +   S++      +   +     N    +
Sbjct: 165 AINIQEQQNQAQELEKMSQVNQ----AQQNLDARQSALNLQRLERQALVEQARQNINSTQ 220

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI--------------VYKSTL 228
               L+ +  +    ++   + L+E+ A+ Q  L + E+               V ++ L
Sbjct: 221 TAEKLVNSRFNRDVAEVARFRQLYEQGAIPQIQLVELEKTAEDSQRLHLQAQSDVTQAQL 280

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYL---------------------KEISRDLE 267
            LRE +   +  +  +    ++A L                           K++   + 
Sbjct: 281 RLREEMSRYQATMSQVVADIEQAKLRLQEQQSSYQSIVQAGKLAVLRSQEQLKDMETQIS 340

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
                 +   S++  L+   +Q+ + SPI G +       +       Q + +I P    
Sbjct: 341 SLSSEISQTKSQIASLQIQMKQRIVRSPIDGIVFELPISKAGPVVDPGQIVAQIAPQDSK 400

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++A++  +    +++G    ++F  Y        +  +  I P    Q +N  + + Y
Sbjct: 401 LILKAQIPSQHSGFLEEGMPVKIKFDAYPYQDYGVMEGRVSWIAPNSRTQSSNQGSIDTY 460

Query: 388 EVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           ++ + +       ++  + L  G  A      +   +   I+ P 
Sbjct: 461 DLDITLDQPYVQTANQRVNLTPGQTATAEVVIRQRRVIDFILDPF 505


>gi|68171393|ref|ZP_00544786.1| secretion protein, HlyD family [Ehrlichia chaffeensis str. Sapulpa]
 gi|67999188|gb|EAM85845.1| secretion protein, HlyD family [Ehrlichia chaffeensis str. Sapulpa]
          Length = 197

 Score =  185 bits (471), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 74/197 (37%), Gaps = 19/197 (9%)

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
              +I+ +L+       D   K+   +   ++  I SP AG I   +  +         P
Sbjct: 1   MQNKINLELKDVTSAITDLKEKMKTAQDILDRTIIRSPQAGIITGLKYHTEGGVIPPGAP 60

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTATVRFPHYADIREKK 362
           +  +VP +    I AK+  + I+ +                 G  A VR   Y   +   
Sbjct: 61  ITNVVPLNDDLIIDAKIQTRHIEEILSAQMKDKNIVSYENYHGLKAKVRLSAYNIRKIGL 120

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAKNTT 421
              I+ ++      + N      YY++ + I  + +    N++L  G PAEV    ++ T
Sbjct: 121 VNGIVVQVSADALSEVN---GMRYYKIQVIIPKEQSAKLKNLKLYPGMPAEVFIITQSRT 177

Query: 422 LAQEIIHPITDNWPKIF 438
           L   +  PIT  + K F
Sbjct: 178 LFNYLFTPITSTFEKAF 194


>gi|218509415|ref|ZP_03507293.1| putative protein secretion protein, HlyD family [Rhizobium etli
           Brasil 5]
          Length = 393

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 51/402 (12%), Positives = 122/402 (30%), Gaps = 23/402 (5%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            + G+++     + ++   + II+   V+ G  +  G  L T +   +   +   K    
Sbjct: 2   IAPGKLVTTQPTIVVQPLETSIIRTIDVKAGEVVHAGQTLATLDATFSQADVGQLKTKFS 61

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L   +   ++ L   +          E  + QL      +++   K F   I+     L
Sbjct: 62  ALDAQVKRLETELTGEDYSRVAGNTPDEQLQVQLFGQRRAFYTAQLKNFEQQIAGQSSVL 121

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                +   +   R +L    SL+ A            K L++  + S   +        
Sbjct: 122 AANRNQEAVLNDRRDNL----SLIEATR----------KKLYDTESGSLLTMLGSRDARL 167

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               ++     +         +L  +      ++ +     L   +        +L  LE
Sbjct: 168 DVEADITAVRGKADEAAHTYAKLLADRQAFIEDFRRAAMEQLADLRSQRDMAGEELKKLE 227

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
             R    + +P    ++     S  +  ++++P++ +VP +        +  + I  V  
Sbjct: 228 LRRNMVALTAPADAVVLDLAQRSVGSVVREAEPVVTLVPINVPLEAEVSINTRDIGRVAV 287

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIIS-------QQDNNLQTQEYYEVILKITD-- 395
           G  A ++   Y   +       +  I                      +++  + + D  
Sbjct: 288 GKEARIKLDAYPFQKYGTASGEVRTISQDTFLTGQQEQTATPGQPAAPFFKARILLADTR 347

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           L  +D  + L  G          N T+    ++P+       
Sbjct: 348 LNVADVPVRLLPGMTVSTEIKVGNRTVISYFLYPLLRGLDSA 389


>gi|172037972|ref|YP_001804473.1| HlyD family secretion protein [Cyanothece sp. ATCC 51142]
 gi|171699426|gb|ACB52407.1| HlyD-family secretion protein [Cyanothece sp. ATCC 51142]
          Length = 572

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 90/523 (17%), Positives = 179/523 (34%), Gaps = 104/523 (19%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + R  P   + +    +      + W+ +  IE  + + G++  + +V EI+SP +G+++
Sbjct: 46  MLRQTPHWSRAVVGAILGVTTIGLVWANVAKIEQVIPAQGQLKPQGSVKEIQSPVNGVVQ 105

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLI-----------------------DLKKVSIKN 105
           +  VE+G ++ +   LL  +   +T  +                        L    ++ 
Sbjct: 106 EVYVEDGERVKKNQLLLKLDSTASTAQLASFKKIRQTLQQENKFYQTLMEQSLDAAKVEQ 165

Query: 106 LRCHIDTEKSALDFLNNKYDVL--EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
               +   K   D   N+  ++   + FE    +    L       +++       V R+
Sbjct: 166 AIARLKLPKEVADLARNRTSLVGETRLFEGLVNEGTQALSLSPEQLARLQATRTEVVSRA 225

Query: 164 LKMKLT---RMRSIYLNRLDLENKSSLL---------------------RALLSSHQKDL 199
              +L      + +  N++ L +    L                     R  L   Q+ L
Sbjct: 226 TTAQLEVQKLQKQLNQNQVQLADARVQLAKDKQVLEDINVRNQLAQAQARESLRIEQEIL 285

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYK-------------------------STLELRENI 234
             +  L E+ A+++  + +Q++ V                               + + +
Sbjct: 286 ADVSPLLEEGAIAKLQIKEQQQQVNDRYAALVEQRGNGAIEYEQQQQQVQNRLAAIEQLL 345

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT------------- 281
            EQ+ +   IN+   +     A   +EI   +  NQ+  AD  S+LT             
Sbjct: 346 EEQQRLQLAINQAQAQLTNTTALAEREIRDKIADNQQKIADIDSQLTKIVVDNEKRIAEL 405

Query: 282 -----ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHSKLTYIRAKV 334
                  + T + + + SP+AGT+   Q+ S       S  +PL+KIVP          V
Sbjct: 406 DSQISSTQVTLKYQELRSPVAGTVFDLQA-SPGFVPPPSQTEPLLKIVP-DDHLVAEVNV 463

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE--VILK 392
           T + I  V++G  + VR   +        K  +  I       D+      YY   V ++
Sbjct: 464 TNQDIGFVRQGMKSDVRIDSFPFSEFGDIKGEVLSIGSDALPPDD---IDRYYRFPVTVQ 520

Query: 393 ITDLAFSDNN--IELRNGFPAEVLFTA-KNTTLAQEIIHPITD 432
           +       N   I L++G    V     +  T+   +    TD
Sbjct: 521 LDSQLLETNGREIPLQSGMSVSVNIKVREERTVISLLTELFTD 563


>gi|262281524|ref|ZP_06059304.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter calcoaceticus RUH2202]
 gi|262257112|gb|EEY75850.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter calcoaceticus RUH2202]
          Length = 302

 Score =  185 bits (470), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 114/333 (34%), Gaps = 53/333 (15%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               +  +  IG++    W+ +  +E   + +G+++       I+S   GI+ K  V+ G
Sbjct: 23  RASLVIWIVGIGLVIFFIWAWVFKLEEVSTGTGKVVPSSKEQVIQSLEGGILTKLNVQEG 82

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L   +       +   +  + + +      ++ +    N   ++      +E
Sbjct: 83  DIVQKGEILAQLDPTRLASNVGESRSLLISAQATASRLRAEV----NGTPLVFPEIVLKE 138

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L+      +++                             R +LE   +  R  L   
Sbjct: 139 PKLVHEETALYASR----------------------------RANLEQTLAGFRQALQLV 170

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q++L M + L  K A S+ ++ +  R                       N+L ++ N   
Sbjct: 171 QQELAMTEPLVAKGAASEVEVLRLRREA---------------------NDLRNKMNDVQ 209

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y  E   +L +       +   +     + ++    +P+ G I      +      Q+
Sbjct: 210 NQYFVEAREELSKANTDIETQQQVVLGRSDSLDRAIFKAPVRGVIKEIAVTTHGGVIPQN 269

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             LM IVP  +   I A++ P+ I  ++ G  A
Sbjct: 270 GKLMTIVPIDEQLLIEARILPRDIAFIRPGQEA 302


>gi|46241641|gb|AAS83026.1| secretion protein-like protein [Azospirillum brasilense]
          Length = 452

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 55/424 (12%), Positives = 145/424 (34%), Gaps = 25/424 (5%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P   + +  +    +I  I  + ++ ++  VS++G ++++   + ++     II+   
Sbjct: 34  PEPFKARIVVWVLAAMVILFIVLASVMKLDRVVSATGRVVSQAPTIVVQPLEISIIRSLN 93

Query: 72  VENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           V  G  + +G  L T +   +      +  +   +      +D E + + F     D   
Sbjct: 94  VRAGQTVRRGDVLATLDPTFSAADVAQLGRQVSKLTAEIARLDAEAAGVPFTVAGKD--- 150

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                          +       ++ Y  +     +     RM ++          +   
Sbjct: 151 ---------------QDMVLQESIWQYRQAEYAAKIANFDQRMATLQATIKSARTDAEHY 195

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R+ L    +   M + L +    S+ +         ++   L  + +  +     +  L 
Sbjct: 196 RSRLKIVGEIEEMRRTLEKNQTGSRLNSLIASDTRVETERNLGLSENTTRTSTHDLEALR 255

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E  +    +   +  DL   Q        +L   +K R+   + +     ++    +S 
Sbjct: 256 AEREVFVQQWRSTVLTDLSTRQVELERAREELAKAQKRRDLVELRAIEDAVVLEVGKYSV 315

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +  + +QP+  ++P +    + A++       VK G T  V+   Y  I     K +++
Sbjct: 316 GSVVESAQPIYTLMPLNAKLEVEAEIAGIDQGFVKPGDTVQVKLDAYRFIEHGMAKGVVK 375

Query: 369 KIDPIIS--QQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQ 424
            I       ++D +   + ++   +++T++   D  ++  L  G P          T+  
Sbjct: 376 TISEDSFTRREDQSQAQRPFFRAKIELTEIDLRDVPSDFRLVPGMPLVADIVVGTRTIIA 435

Query: 425 EIIH 428
            ++ 
Sbjct: 436 YLVE 439


>gi|162149266|ref|YP_001603727.1| secretion protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|161787843|emb|CAP57441.1| putative secretion protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 479

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 68/449 (15%), Positives = 142/449 (31%), Gaps = 44/449 (9%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            +PA+L    L+S + I G++  S+  P++  VS+ G + + D  + ++   + II+   
Sbjct: 48  PNPAALYITWLISTLAIAGIVVMSV-CPLDQVVSAQGRLTSTDTTLVVQPLETAIIRSID 106

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           V+ G  + +G  L   +   T   ++  +    +       +  E    D++ +  D   
Sbjct: 107 VQEGDVVHRGQVLAHLDPTVTDADVENMRQQQAAYAAQVARLTAEAEGRDYIPDPAD--- 163

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                +E           +   + F+   +     ++  L    ++Y  R  +      +
Sbjct: 164 -PASVQEAAAFQRRRAEFTAKVENFDKQAAGARSDMQGSLADA-AMYGARARVAANVYAM 221

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L   Q+D    +        +QNDL + ER    +         + + +    +   
Sbjct: 222 RLRL---QRDQVGSRL---STLSAQNDLMEVERAQIAAQQAAGSARAKLEGVTAARDGFI 275

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                   N+   + +DL   Q   AD           R    + +      +   S S 
Sbjct: 276 Q-------NWKATVYQDLGTAQHRLADAGHDYRKAGLLRTLIGMHADRDDEALNIVSLSV 328

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +  Q    LM +VP      +   V    +  +  G    ++F      +    +  + 
Sbjct: 329 GSVMQAGNLLMTLVPVDDELEVDTAVRGSDVGFIMPGDPVLLKFATLPYTQYGGAEDTVR 388

Query: 369 KIDPIISQQDNNLQTQE----------------YYEVILKITDLAFSDNN--IELRNGFP 410
            I       D+                      YY V +++                G P
Sbjct: 389 IISADSFAPDDGGHAAPGTGAQVPRPDAGGMEAYYRVRVRVDRYTLHGVPSFFHPHPGMP 448

Query: 411 AEVLFTAKNTTLAQEIIH---P-ITDNWP 435
            E        T+ Q +++   P +TD   
Sbjct: 449 VEADIHVGRRTMMQYLLNRLVPTLTDGMR 477


>gi|126658170|ref|ZP_01729321.1| hypothetical protein CY0110_11567 [Cyanothece sp. CCY0110]
 gi|126620541|gb|EAZ91259.1| hypothetical protein CY0110_11567 [Cyanothece sp. CCY0110]
          Length = 552

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 67/450 (14%), Positives = 156/450 (34%), Gaps = 46/450 (10%)

Query: 7   KNLKRNHPASLKRMTLLS-IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + L    PA+L +  +L  I        W+    +E    + G+++ E    +I+    G
Sbjct: 81  QTLLDQPPATLPQKFILGGIAFCFAFSAWAWFGTLEEVGKAQGKLVPEGETYKIQPVELG 140

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +    VE G ++  G  L+ F+       ID  +  I+  +  +  + +    +  + +
Sbjct: 141 KVTDIAVEEGQEVQAGQLLVEFDTELAEKEIDRLQEMIRAYQTELSQKHTLKQRIQLEAE 200

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             + A  S E Q    +  +           ++     +     R + +       + + 
Sbjct: 201 T-DAAIASAELQAQQAVIAHTKEKIATVRQLLAQQQNEVAAYQLRQKQLQPLDSIAQQRL 259

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---------------- 229
             L     +HQ+ +  +K L E+ A+SQ  L + E+ + ++  +                
Sbjct: 260 EQLEVEKIAHQERINRLKPLQEEGAISQEYLYEAEQTLRQTEQQITSSQLQEVTQANEQI 319

Query: 230 ---------LRENIHEQKNMLRHINELYDEANLEFA--------------NYLKEISRDL 266
                    LR  + E +  L    +   ++  EF                 ++++  ++
Sbjct: 320 FQANQGIRNLRSQMTENQGELFSAQKTVQQSQAEFTQKQAQAQRKQIEAMQKIQQLEVEM 379

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            Q Q    +  + L   +   + K + +PI+GTI+     ++    +  + + +I PH+ 
Sbjct: 380 TQLQGKITENKNLLIAAQSKLQYKYLKAPISGTILSLDLKNTGEVVEAGKTVAEIAPHNV 439

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A +  ++   V  G  A V+   Y           +  I       +++ +  E 
Sbjct: 440 PLVVSAVLPDEEAGFVDIGMPAQVKLDAYPYQDYGVITGQVTDISADA---ESDEKLGEI 496

Query: 387 YEVILKITDLAFSDNNIEL--RNGFPAEVL 414
           Y V +++       N   +  + G      
Sbjct: 497 YRVEIELERDHILKNQEMISFKPGQTVTAD 526


>gi|166368197|ref|YP_001660470.1| hemolysin secretion protein [Microcystis aeruginosa NIES-843]
 gi|166090570|dbj|BAG05278.1| hemolysin secretion protein [Microcystis aeruginosa NIES-843]
          Length = 636

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 77/529 (14%), Positives = 179/529 (33%), Gaps = 115/529 (21%)

Query: 17  LKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             R  + +++ +    + WS    IE  V + G++  +  V E+++P +G+++  +V++G
Sbjct: 105 WSRTIIWTLMSVTTAALIWSAFAKIEQVVGAQGQLKPQGKVQEVQAPVNGVVQFVKVKDG 164

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLR----------------CHIDTEKSALDF 119
            ++ +G  L+  +   +   ++  +    +                    +++  + L  
Sbjct: 165 DRVNKGDVLVLMDSSASQVQLESLRKIRTSAEKENQFYRLLMAQDLTPAAVESSIAQLKL 224

Query: 120 LNNKYDVLE-KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +   D+   +A    E QL        ++ S +    ++ +  + +   +R  +  L  
Sbjct: 225 PSEIADLARNRAALVTENQLYQAQVSEGASSSALQGDELARLGAARREANSRQAAARLEM 284

Query: 179 LDLENKSSLLRALLSSHQKDL--------------------------------TMMKNLF 206
             LE + +  R  L+  +  L                                  ++ L 
Sbjct: 285 EQLEKQLAQTRVQLADARSQLIKDRLVLEEIKTRNANSMKQGQESLDIERNILKDIEPLG 344

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIH-----------EQKNMLRHINELYDEANL-- 253
           ++ A+++  +N+Q++ V     EL++              E +  +  I+ L  E     
Sbjct: 345 DEGAIARYQINKQKQSVTDRQNELQQQEANGKIDREKQEKEVQTRIAEISRLEQEEKRYF 404

Query: 254 ------------------------------EFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                                           A    +ISR +  N +  A+  S+++  
Sbjct: 405 LLISQAQEKLINTTVITEKDVRDKMADNYKRIAEIDSQISRIIIDNNKRIAELDSQISQA 464

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKL----------TYIR 331
           ++T + + I +PI G +   ++       Q   ++ L+K+VP                  
Sbjct: 465 QQTIKYQKITAPIDGVVFDLKAR-PGFVPQPSQAEALLKLVPDGCPTEVKDAAKGCLVAE 523

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             VT + I  V+ G  A +R   ++       K  +  I       D N +   +  V +
Sbjct: 524 VDVTNQDIGFVRVGQKADIRIDSFSYSEYGDIKGEVISIGSDALPPDENHRFYRF-PVRV 582

Query: 392 KITDLAFSDNN---IELRNGFPAEVLFTAKN-TTLAQEIIHPITDNWPK 436
           ++        N   + L++G    V        T+        TD + K
Sbjct: 583 RLNSQELVLKNQSTLPLQSGMSVSVNIKVNENRTVLG----LFTDMFNK 627


>gi|254411598|ref|ZP_05025374.1| auxiliary transport protein, MFP family [Microcoleus chthonoplastes
           PCC 7420]
 gi|196181320|gb|EDX76308.1| auxiliary transport protein, MFP family [Microcoleus chthonoplastes
           PCC 7420]
          Length = 518

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 67/465 (14%), Positives = 160/465 (34%), Gaps = 45/465 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L +      +R+ +  +   I    W+    I+    + G ++ + NV +I S  SG I 
Sbjct: 50  LDQPPAGFPQRLMVGGLAFCIAFGAWATFGHIDEVGKAHGRLVPKGNVYKIHSVQSGKIV 109

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             +VE G  I  G  L+  +       +   +  + + +  +  EK  ++    +    +
Sbjct: 110 DIEVEEGELIKAGQVLVELDTELAVTEVKRLEQLLNSQQTELTQEKELIERTRLEAQTRQ 169

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +  ++  +     L +  +  + V    +  ++        R + +       +   +  
Sbjct: 170 RIAQAEVQAQQAALAQAKAKIT-VLKQKLPQLHTEKAFHQKRQQRLQPLTAHADELFARR 228

Query: 189 RALLSSHQKDLTMMKNLFEKNAVS------------------------------------ 212
           +A   +  + L  +K L E+ A+S                                    
Sbjct: 229 QAEAEAQAERLKTLKPLLEEGAISSEMVFQAEQSLRASQSAIIQSQLQEGTSTQEQLFQA 288

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLKEISRDLEQN 269
           Q  L   +  + ++  EL++ + E   +   + +   E   + +E    ++++  +L Q 
Sbjct: 289 QQTLRDLDLQMIQAQGELQQTLAEIDQLQAGLAQKQTEVRRSQIEAQERIQQLEMELTQL 348

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   AD  ++L   +    Q+ + +P+ G +       S    Q SQ + +I P  +   
Sbjct: 349 KAKIADNKNQLVRAKAQLNQQFLYAPVDGVVSSLSVSHSGEVVQPSQTVAEIAPKGEPLV 408

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A +       +K G    V+F  Y           +  I P     +   Q    Y V
Sbjct: 409 LSASLPNHDAGFIKVGMPVKVKFDAYPYQDYGIVTGEVTYISPDSKADE---QFGVVYHV 465

Query: 390 ILKITDLAFSDNNIEL--RNGFPAEVLFTAKNTTLAQEIIHPITD 432
            +++     ++   ++  + G  A      +   +A  ++ P  +
Sbjct: 466 EVELDRNHVTEGGHQIEFKAGQTATAEIIIRRRRIADILLEPFRE 510


>gi|257092953|ref|YP_003166594.1| secretion protein HlyD family protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045477|gb|ACV34665.1| secretion protein HlyD family protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 433

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 47/399 (11%), Positives = 132/399 (33%), Gaps = 18/399 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               +++ V++ G ++     + ++   + II++  V++G  + +G  L T +   T   
Sbjct: 38  TFSEVDLMVTARGRLITPLPNIVVQPLDTAIIQEINVKSGQVVKKGERLATLDPTFTGAD 97

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
               +  + +L              + + + LE     +       L       S++   
Sbjct: 98  ESQLRTRLASL--------------DTQRESLEAELAGKGVAAGAALSDDQEIQSRLAGE 143

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             +S     +     +  I           S + + +    + +  ++ L ++  V +  
Sbjct: 144 RQASYLAQTRRLDENIGRIRAALETNRRDQSSMTSRVRVLGEMVASLEPLVDQKYVVRAR 203

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  ++++    +     ++ + + +  L  E       + +++  +L    R    
Sbjct: 204 LLDAQDRLFEAERGAQMARSREQELQKELRALEAERLSFQTGWRQKVMEELLALSRERDT 263

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +L   +K  +   + +P    ++     S  + A+ ++ L  +VP         ++ 
Sbjct: 264 VNEQLQKADKRHQLVVLSAPSDAVVLEIAKLSPGSVAKGAESLFTLVPLGDDLEAEVQIE 323

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT--QEYYEVILKI 393
              I +VK+G    ++   Y           +  I     ++D         YY   + +
Sbjct: 324 SADIGYVKRGDRVHLKVDAYPFQLHGALDGTLTTISEDAFRRDKATGGGIDAYYLGRIGL 383

Query: 394 --TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             T L     +  L  G            ++   ++ P+
Sbjct: 384 TRTRLNRLPEHARLLPGMTVSAEIAVGKRSVISYLLWPL 422


>gi|262278515|ref|ZP_06056300.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter calcoaceticus RUH2202]
 gi|262258866|gb|EEY77599.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter calcoaceticus RUH2202]
          Length = 304

 Score =  184 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 113/333 (33%), Gaps = 53/333 (15%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               +  +  IG++    W+ +  +E   + +G+++       I+S   GI+ K  V+ G
Sbjct: 25  RASLVIWIVGIGLVIFFIWAWVFKLEEVSTGTGKVVPSSKEQVIQSLEGGILTKLNVQEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L   +       +   +  + + +      ++ +    N   +       +E
Sbjct: 85  DIVQKGEILAQLDPTRFASNVGESRSLLISAQATSARLRAEV----NGTPLAFPEIVLKE 140

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L+      + +                             R DLE   + L+  L   
Sbjct: 141 PKLVHEETALYRSR----------------------------RADLEQTIAGLKQALQLV 172

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q++L M + L  K A S+ ++ +  R                       N+L ++ N   
Sbjct: 173 QQELAMTEPLVAKGAASEVEVLRLRREA---------------------NDLRNKMNDVQ 211

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y  +   +L +       +   +     + ++    +P+ G +      +      Q+
Sbjct: 212 NQYFVKAREELSKANTDIETQQQVVLGRTDSLDRAIFKAPVRGVVKEIAVTTHGGVIPQN 271

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             LM IVP  +   I A++ P+ I  ++ G  A
Sbjct: 272 GKLMTIVPIDEQLLIEARILPRDIAFIRPGQEA 304


>gi|75674734|ref|YP_317155.1| type I secretion membrane fusion protein, HlyD [Nitrobacter
           winogradskyi Nb-255]
 gi|74419604|gb|ABA03803.1| type I secretion membrane fusion protein, HlyD [Nitrobacter
           winogradskyi Nb-255]
          Length = 448

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 53/429 (12%), Positives = 141/429 (32%), Gaps = 14/429 (3%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSS-SGEILNEDNVVEIKSPFSGIIKKFQ 71
            P   +    +    ++ ++    L  ++  ++S SG I+   +V  +++    IIK   
Sbjct: 26  EPLVARVTLFVLSAFLVSIVAILCLTQVDRVITSLSGNIVPVGHVNVLQALDPSIIKTID 85

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+  G  L T +   T+  +   K+ I +L      +++ L          ++  
Sbjct: 86  VREGEQVKTGQLLATLDATFTSADLTQAKLQIASLEAQAARDEAELK---------QQPL 136

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              +    DF  KY +    ++   ++     +    +++R        L    +  R  
Sbjct: 137 VFPDNPDSDFQ-KYAALQKALYEQRVAQYQAQINSFESKIRETKATIEKLRADDTRYRQR 195

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                K   M   L E+   SQ ++   +    +    L    +        +  +  + 
Sbjct: 196 EEIMAKIEQMRTTLAERGTGSQLNMYISQDARLELLRTLENAHNGLIEAQNTLGSITADR 255

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           +     +  ++S+DL   +    +  +      K ++     +     ++     S  + 
Sbjct: 256 DAFKQQWFAQLSQDLVTTRNKLDEARATYEKAFKHQDLVRWTAAEPSVVLTMAKLSVGSV 315

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +   P + ++P         +++ + +  ++ G    ++   +           +  I 
Sbjct: 316 LKPGDPFITLMPIDTKLEAEIRISSRDVGFIRAGDPCVMKIDAFNAAEHGTAHGKVRWIS 375

Query: 372 PIISQQDNNLQT-QEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                 D++ +    YY+    +   AF    +N  L  G   +        ++A  ++ 
Sbjct: 376 EGTFTTDDDGKPVDAYYKARCSVDASAFKGVPSNFRLIPGMTLQGDINVGTRSVAMYLLG 435

Query: 429 PITDNWPKI 437
            +     + 
Sbjct: 436 GMLKGMSEA 444


>gi|33595036|ref|NP_882679.1| cyclolysin secretion protein [Bordetella parapertussis 12822]
 gi|33565112|emb|CAE40064.1| cyclolysin secretion protein [Bordetella parapertussis]
          Length = 440

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 61/424 (14%), Positives = 142/424 (33%), Gaps = 42/424 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +R    + + +  + +    G + WS++   EI V ++G+++       I +  +G + 
Sbjct: 46  QERPISPTARWLARILMALAAGALVWSVVGKTEIVVHAAGKVVPVGQSKIIAASDTGRVA 105

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V + S++  G  LL  +   T    + +K  ++  +   D  +S          ++ 
Sbjct: 106 RVLVADNSRVAAGDVLLRLDAGVTDA--EERKWRVQAAQARQDEARSRA--------MIR 155

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                R   L +         ++ +               ++          +E   +  
Sbjct: 156 ALDTGRAPVLAELPADPGMMAAQSYLD-------------SQYADYQAQLRSIEAAIAAY 202

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L    +     + L     VSQ    ++E+        LR++  ++  +        
Sbjct: 203 RRELGLVTQIAHAHRGLRRDGDVSQQAYLEKEQARTTLEGRLRQSEAQRAALQTQTRRQA 262

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E               L   ++  A    ++      R +  + +P+ G +    +   
Sbjct: 263 FET--------------LVLARKLAAQAEQEIARTSAQRSRLVLTAPVDGVVQQLVALIE 308

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +QPLM +VP      ++A++  K I  V+ G +A+V+   Y   +    +  + 
Sbjct: 309 GTAVAATQPLMMVVPSGAGIQVQAQLDSKDIGFVRAGASASVKVGAYDYTKYGTLEGTVL 368

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            + P     D     Q  Y V + +    L        L+ G   +      +  L + +
Sbjct: 369 HVSPDTVVDDR---QQHSYRVTIALAQATLEVDGQPQRLKEGMAVQADIRTGSRRLIEYL 425

Query: 427 IHPI 430
           + P+
Sbjct: 426 LSPV 429


>gi|146343787|ref|YP_001208835.1| HlyD family secretion protein [Bradyrhizobium sp. ORS278]
 gi|146196593|emb|CAL80620.1| Putative HlyD family secretion protein [Bradyrhizobium sp. ORS278]
          Length = 458

 Score =  183 bits (464), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 57/420 (13%), Positives = 133/420 (31%), Gaps = 14/420 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSG-EILNEDNVVEIKSPFSGIIKKF 70
             P   +    + +  I+ LI    L+ ++  V S G +I+  D +  +++  + IIK  
Sbjct: 35  PEPVGARATLYVLVAMILSLIAVMCLMRLDRVVQSVGGKIVPLDAINVLQALDASIIKTI 94

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G Q+  G  L T +   T   +   K  + +L   +  +K+ L      +   + A
Sbjct: 95  DVREGQQVASGQLLATLDPTFTQADVAQYKAQVASLSAQVARDKAELAGTPLVFPPSDDA 154

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                         Y      ++    +     +    +++         L+        
Sbjct: 155 ----------EFASYAKLQLALYRQRRAQYDAQIASFDSKISQTEATIAKLQKDDERYGQ 204

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                QK  TM   L E  + S+ +L   +    +   ++    +        +  L  +
Sbjct: 205 RDDVLQKIETMRSTLAESGSGSKLNLYISQDTRLELLRQIDSTHNSLIEAKHQVESLRAD 264

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                  +  ++S+DL   Q +     +      + ++   + +P    ++     S  +
Sbjct: 265 RKAFIEQWNAQLSQDLVTTQNSLDAANAAYDKAIRHQDLVRLSAPEPSVVLTLAKLSVGS 324

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +   P + ++P         ++  + I  V+ G   T++   +  +     +  I  +
Sbjct: 325 VLKPGDPFITLMPLRARLEAEIRIASRDIGFVRPGDPCTLKVDAFNHVEHGTAQGTIRWV 384

Query: 371 DPIISQ-QDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTLAQEII 427
                   D+      YY+    +    F D      L  G            + A  ++
Sbjct: 385 SEGAFTLDDDGKPVDAYYKARCSVDATNFHDVPAGFRLIPGMTLTGDINIGTRSAAMYVL 444


>gi|119510766|ref|ZP_01629892.1| hypothetical protein N9414_03810 [Nodularia spumigena CCY9414]
 gi|119464529|gb|EAW45440.1| hypothetical protein N9414_03810 [Nodularia spumigena CCY9414]
          Length = 500

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 77/465 (16%), Positives = 170/465 (36%), Gaps = 44/465 (9%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           + K+L  + P    R  L  +I  + +I  W+IL  ++ +  + G +  +   V + +P 
Sbjct: 31  VTKDLLDSLPQVWTRGLLYFLIVFVSIILPWAILSRVDETGVARGRLEPQGKTVRLDAPV 90

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           +G +   QV++G  +  G  LL  E    T  +   K  ++     +    + L+ L N+
Sbjct: 91  AGTVADIQVKSGDVVKAGQTLLVLESELVTSELRQTKDRLEGQLNRL----AQLNLLKNQ 146

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL-E 182
             ++  A + ++ Q  +   +     ++     I S     K + +   +     ++  +
Sbjct: 147 L-IVALATQRQQNQSQELEKQSQIDQARQQLSAIKSSSNLQKEEKSSQVNQAKQSVEFSQ 205

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL-------NQQERIVYKSTLE------ 229
             + L+ + L+S Q+++     L+E+  + +  +        +QER+  +S  E      
Sbjct: 206 TANKLIASRLASSQREVKRYLQLWEQGVIPETTVVEKQDIAQEQERLYEQSKSEIEQAKL 265

Query: 230 -LRENIHEQKNMLRHINELYDEANLEF---------------------ANYLKEISRDLE 267
            L E     +  +   N   ++A L                          LK I  ++ 
Sbjct: 266 RLAEQQSSYERTITQFNADIEQAELRLNEQENGYKTLTHAGELAILRTEEQLKNIDTEVS 325

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
                 A   S++  LE    Q+ + + + GT+       + +  Q    + +I P    
Sbjct: 326 TLNAEIAQTKSQIQSLEFQITQRVVKANVTGTLFQLPIEKAGSVVQPGTMIAEISPIGSP 385

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +RA++   +   +++G    ++F  Y           + +I P  ++ D        Y
Sbjct: 386 LIVRAQMATTESGSLRQGLPVKLKFDAYPFQDYGVIAGELLEISPTTTEIDTPNGKVAAY 445

Query: 388 EVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            + + I       NN  I L  G  A      +   +   ++ P 
Sbjct: 446 NLEIAINQDCIPSNNQCIPLNPGDTATAEVIVRQRRIIDFLLDPF 490


>gi|259418082|ref|ZP_05742001.1| type I secretion membrane fusion protein, HlyD [Silicibacter sp.
           TrichCH4B]
 gi|259346988|gb|EEW58802.1| type I secretion membrane fusion protein, HlyD [Silicibacter sp.
           TrichCH4B]
          Length = 209

 Score =  182 bits (463), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 70/208 (33%), Gaps = 4/208 (1%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           I  +      I EL  E         +E    L   +    + + K   L     +  I 
Sbjct: 2   IATEAQARGRITELEIETLKLSTQRREEAITRLRDLRYKELELIEKRRSLIDRLGRLDIT 61

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P++G +      +  +  + + P++ +VP  +   I A+V P  I  +  G   ++R P
Sbjct: 62  APVSGVVYGMSVRTPRSVIRPADPVLYLVPQDRPLVIAARVAPTDIDQIHVGQAVSIRLP 121

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPA 411
                +  +    +        + +       YY   +++ +           L  G P 
Sbjct: 122 ALDQRQTPELFGTVTLFSADAFRDEGT--GVSYYRAEIELNEGEMERLPQGTVLIPGMPV 179

Query: 412 EVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +      + +    ++ P+ D + K F 
Sbjct: 180 DSFIRTADRSPLAYLVKPLADYFVKAFR 207


>gi|291543331|emb|CBL16440.1| type I secretion system ABC transporter, HlyB family [Ruminococcus
            sp. 18P13]
          Length = 1123

 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/435 (16%), Positives = 155/435 (35%), Gaps = 49/435 (11%)

Query: 5    MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
            M + ++R    +   + L     +I  I W+ L  ++I V+SSG +    N+  + +  S
Sbjct: 736  MLEIIERPAHKAGTVIILGVFTLLIAAIVWACLSKVDIVVTSSGTMQPVGNISSLNTYTS 795

Query: 65   GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
            G +K   VE G+ +  G  L+  +    T  ID+   ++   +  ++ +K     + N  
Sbjct: 796  GTVKSINVEEGAYVKAGDVLIELD----TQSIDIDVEALSQQKEVLEAQKEIYTMIKNGE 851

Query: 125  DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            DV           L  ++           N                     L+ L+   +
Sbjct: 852  DVSTVDITKYGANLQPYILTIIDNEKAYQNN--------------------LSILESTKE 891

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            ++ L   ++  + D      +     +S  + N Q+ ++ ++  E  +      N     
Sbjct: 892  NAGLTRDIAQIKYDDYNTNPM-----ISVAEFNAQKLVLQQAENEYLQAELNILNAQTSY 946

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +E  +    +  + LK+   +LE+ Q +               + + +++P+ G I    
Sbjct: 947  SEQINSNISDINSKLKQADSELEKYQLSL--------------DYQKVIAPVNGYINSIA 992

Query: 305  SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
              +       +Q ++ IVP      +   V    I  +  G  A ++   Y   +    K
Sbjct: 993  VNNVGETVTSAQQIITIVPADAPVEMACYVKNMDIADIMVGMEAEIKLEAYPYNKYGTVK 1052

Query: 365  AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
              ++ I P      N+ Q    Y V L + +   ++  I + +G    V       ++ +
Sbjct: 1053 GTVKYISPSSF---NSEQLGSVYLVKLDVDN---TNPGINVMSGLSGSVEVKIGKQSVMR 1106

Query: 425  EIIHPITDNWPKIFE 439
              + PI   + +  +
Sbjct: 1107 YFLDPIVKGFDESLK 1121


>gi|307152559|ref|YP_003887943.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7822]
 gi|306982787|gb|ADN14668.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7822]
          Length = 591

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 80/527 (15%), Positives = 178/527 (33%), Gaps = 104/527 (19%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP-FSGIIKK 69
           R  P   + +    +   +  I W+ + PIE  V ++G++  +  V EI++P  +G++K 
Sbjct: 65  RQSPTWSRGVIWTILTVTVASIAWAAIAPIEQVVQATGQLKPQGKVKEIQAPVNNGVVKD 124

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKK-----------------------VSIKNL 106
             +++G ++ +G  L+ F+   +       K                         ++  
Sbjct: 125 VLIKDGDRVEKGEVLVIFDTDASKAEFQSYKKIRQAIVQENEFYEKLMSEDVDPSQLEAA 184

Query: 107 RCHIDTEKSALDFLNNKYDVLEK---------------AFESREEQLLDFLGKYHSTCSK 151
              +   K       N+  ++ +                  S +   LD   K   + + 
Sbjct: 185 MNQLKLPKEVTTLARNRIALMTENQLFRYQLGETVANMKLNSEQLARLDAARKELGSRAL 244

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLD-----------LENKSSLLRALLSSHQKDLT 200
                ++ + + L     ++       ++            ++     ++ L   QK   
Sbjct: 245 AAKLEMAQLGKQLTQTQVQLADAKSQLINDRRVLEEIKTRNQDYLVQAKSSLDIEQKIYN 304

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRE---------------------NIHEQKN 239
            +  L ++ A++   +N+Q++ V     ++ E                     +I   + 
Sbjct: 305 QIAPLADEGALASYQINKQQQSVNDRIADITEKQGNGQIEYKKQLQQIETRLADIGRYQE 364

Query: 240 MLRHINELYDEANLEFANYL----KEISRDLEQNQRTFADEMSKLTI------------- 282
             + +    ++A  ++ N      KE+   + +NQ+  A   S+LT              
Sbjct: 365 EEKRLQAAIEQAREKYNNTQDITEKEVRDKMAENQKQIAAIDSQLTKNLVDNRNKISEYD 424

Query: 283 -----LEKTREQKTILSPIAGTIVYNQS---FSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                  +T + + I +PI+GT+   Q+   +     ++  +PL+KIVP          V
Sbjct: 425 SQISRAAQTLKYQVIKAPISGTVFDLQASPGYVPQAVSKP-EPLLKIVP-DDYFVAEVDV 482

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKI 393
             K I  V+KG  A +R   +        K  +  +       D   +   +  E+ L  
Sbjct: 483 INKDIGFVRKGMKADIRIDSFPFSEYGDIKGKVSSVGSDALPPDEIHKYYRFPTEIKLDK 542

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN-TTLAQEIIHPITDNWPKIFE 439
             L   D  I L++G         +   T+        T+ + +  E
Sbjct: 543 QYLQIEDKKIRLQSGMSISANIKIRENRTVLS----LFTEQFTRSVE 585


>gi|71737530|ref|YP_273096.1| HlyD family type I secretion membrane fusion protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|71558083|gb|AAZ37294.1| type I secretion membrane fusion protein, HlyD family [Pseudomonas
           syringae pv. phaseolicola 1448A]
          Length = 450

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 53/393 (13%), Positives = 121/393 (30%), Gaps = 29/393 (7%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I +  ++SG+I+       I+S  + ++K   V +G  +  G  LL  +       + 
Sbjct: 76  GKIYVVATASGKIIPSGKTKTIQSSETAVVKAIHVRDGQSVKAGQLLLELDSKSADADVG 135

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  +   R       + LD +N +     K        ++D    +     +      
Sbjct: 136 RVRSDLLAARIDSARAAAMLDAINQR-----KPPRDLTGTIVDADPMHVLAAERWLQGQY 190

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                SL +    ++    +      + + L+  L    K  +  +NL +K  ++++   
Sbjct: 191 QEYRSSLDLVDAEIQQRQADIQAARIQVTSLQKTLPIATKLASDYENLLKKQYIARHAYL 250

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           ++E+       +L               E         A   + +   L+Q  +  A   
Sbjct: 251 EKEQARLDLERQLSVQQASVLQSTAARQEAERRREGVVAQTRRAMLDLLQQADQKIASFN 310

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
             LT      +                          +QPLM +VP  +   + A +  K
Sbjct: 311 QDLTKARYQEDLT-----------------------PAQPLMVLVPDGQPVEVEAMLENK 347

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  V+ G   TV+   +   +       +  +     + +         ++ L    L 
Sbjct: 348 DVGFVRAGQPVTVKVETFTFTKYGTIDGEVISVSNDAIEDEKRGLIYSS-KIRLNSDTLN 406

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +  +I+L  G             + +  + P+
Sbjct: 407 VNCVDIKLSPGMAVTAEVKTNKRRVIEYFLSPL 439


>gi|166366327|ref|YP_001658600.1| hypothetical protein MAE_35860 [Microcystis aeruginosa NIES-843]
 gi|166088700|dbj|BAG03408.1| hypothetical protein MAE_35860 [Microcystis aeruginosa NIES-843]
          Length = 484

 Score =  182 bits (461), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/467 (14%), Positives = 158/467 (33%), Gaps = 42/467 (8%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSP 62
           F  K L    P    R  L  +I  + +I  W+I   ++ +    G++  +   V+I + 
Sbjct: 14  FQTKELIDTLPLPWTRGLLYFLIIFVSIILPWAIFSKVDETGVGPGKLEPQGETVKIDAI 73

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G ++K  V  G ++  G P+LT +       I   +  I+  +  +  +K     + +
Sbjct: 74  ATGKVEKIYVREGQEVKAGQPILTLDSSLIGKEIQQIEEKIEGQKSRLSQQK----LVKS 129

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           + ++       +                +  +  I     SL+ +  R+          +
Sbjct: 130 QLEISLTTQSQQNRAAAAEKEASIEQARENVDALIKKAKISLEEQQARVNQAKTALAQSQ 189

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE---RIVYKSTLELRENIHEQKN 239
               +L++   +  K++   +  +E  A+S+    ++E   +   +     +  + E ++
Sbjct: 190 TDYPILKSRYETALKEVDRYRKAWEDGAISEVQFIEREDNAKERQQLYERGKAEVKENQH 249

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQR---------------------------- 271
            L  +   Y + + + +  + +    L++ QR                            
Sbjct: 250 KLAELKSAYRQTSQQTSADIAQARLQLQERQRGYQSLRHSNELALLRVQEQINNLDTEIA 309

Query: 272 ----TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
                 A   S+   L+    Q+ + +   GTI       +    Q    + +I P    
Sbjct: 310 TLASEIAQSESQRQALQIQLSQRVLKANTDGTIFSLPIKRAGAVVQSGTRVAEIAPKGSR 369

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++A++   Q Q ++ G    V+F  Y           I K  P   +++        +
Sbjct: 370 FILKAEMPTDQSQFLRAGMPIKVKFDAYPFQDYGIIGGKITKKSPTAIEKETPNGKINVF 429

Query: 388 EVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           E+ +++        N  I L  G  A      +   +   I+ P  D
Sbjct: 430 ELEIQLDRSCIQKGNQCIPLNPGDTATAEAIVRQRRVIDYILDPFKD 476


>gi|172037107|ref|YP_001803608.1| HlyD family secretion protein [Cyanothece sp. ATCC 51142]
 gi|171698561|gb|ACB51542.1| putative HlyD-family secretion protein [Cyanothece sp. ATCC 51142]
          Length = 553

 Score =  181 bits (460), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/502 (14%), Positives = 171/502 (34%), Gaps = 96/502 (19%)

Query: 15  ASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           +   +  L +++G+    + W+ +  IE +V  +G++  E  V E+++P  G+I +  VE
Sbjct: 39  SFWSKALLWTVMGVSSFGLGWACVAQIEQTVPVTGQLKPEGKVKEVQTPVGGVITQVHVE 98

Query: 74  NGSQILQGTPLLTFEDIETTDLID-----------------------------------L 98
           +G ++  G  L+TF+   T   +                                    L
Sbjct: 99  DGERVQPGDLLVTFDTTNTVARLKSLNEEKQSLGQENQYYQALMQNAASIPRHLPPNLPL 158

Query: 99  KKVSIKNLRCHIDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGKYHSTCS---KVFN 154
           +   +   R  + TE       L+     +     +R   L         T         
Sbjct: 159 EIAQLGRERAELVTENQVFRAKLSGDIPNVNGENLARLNALRAQSNARIQTARLDMAQLE 218

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL----LRALLSSHQKDLTMMKNLFEKNA 210
             +      L     ++ +   N +D++ +        +  L + ++ L  ++ L E+ A
Sbjct: 219 KRLQQNQVQLADAKKQLATEKQNLVDIQRRDQSGLKNTQQSLQTEEQILNRIEPLKEEGA 278

Query: 211 VSQN-------------------------DLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           ++                           D+NQQ + +  +  ++   I EQK +   ++
Sbjct: 279 IALIQYDKQLQAVNELRAELSQREAEASLDMNQQRQTIQSTQADIDRLIQEQKRLQLELS 338

Query: 246 ELYDEA------------------NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           +   +                       A    ++++ + +N++  +   S+L+  +   
Sbjct: 339 QSQQKLNNIMADGETNLRGQIAANEQRLAEIYSQLTKRIVENKKRLSQIESELSQTKLNL 398

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
             + + +  +G +   ++      A+ SQPL+KIVP          +T + I  VK+G  
Sbjct: 399 TYQNLKADTSGVVFDLKASQPGFVAKASQPLLKIVPQD-FLIAEVFITNQDIGFVKEGMP 457

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE----VILKITDLAFSDNNI 403
             VR   +        +  I  I     + D       +Y     + L+  +L+ +   +
Sbjct: 458 VDVRIDSFNFSEYGDIQGKIISIGKDALEPDE---IYPFYRFPALIRLETQNLSVNGREL 514

Query: 404 ELRNGFPAEV-LFTAKNTTLAQ 424
            L++G      +   +   +  
Sbjct: 515 SLQSGMSISANVIVNEKRRVIS 536


>gi|158337136|ref|YP_001518311.1| HlyD family secretion protein [Acaryochloris marina MBIC11017]
 gi|158307377|gb|ABW28994.1| HlyD family secretion protein [Acaryochloris marina MBIC11017]
          Length = 517

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 66/453 (14%), Positives = 162/453 (35%), Gaps = 45/453 (9%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           R+    ++ ++  + W+ L  IE   ++ G+++ +    +++S   G + +  V+ G  +
Sbjct: 59  RIISSGLVFLLAFLGWAWLGKIEDIGTAKGKLVPKGETYKVESVAIGKVSRIAVKEGETV 118

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             G  +   +       +   +  + + +  +  ++S L+ +  +    ++   S E   
Sbjct: 119 AAGQVIAELDTSLDKKEVKRLEQMLSSYQQELKQKQSLLNKVYLEAQTHQRISTS-ENLG 177

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +   K     +      +    + L     R + + L      ++   L   L S+Q  
Sbjct: 178 QESAIKSAEDRADTLLQLLIQQKQELNAYNARHKRLKLLSNLSRSRVKQLELDLKSNQGR 237

Query: 199 LTMMKNLFEKNAVS-----------------------------QNDLNQQERIVYKSTLE 229
           +  +K+L ++ A+S                                + Q E+ +     +
Sbjct: 238 VKKLKSLKKQGAISSELVFQANQNLSQVQSQITESKLQDITSVSQQIFQNEQSMRTLAAK 297

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLK----------EISRDLEQNQRTFADEMSK 279
           + ++  E  +  R + +L  E N   A   +          ++  +  Q +   ++  ++
Sbjct: 298 MTQDQGELYSAYRQVEQLKAELNRNKAERTRLKLEAYQKIDQLKLETTQAKTKVSETKNQ 357

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           +   + T +QK   +PI G ++     +        Q + +I PH+    I A +  K+ 
Sbjct: 358 MLKAKATLDQKLFKAPIDGVVLSFNLKNEGKVVNSGQTVAEIAPHNTPLIISAVLPNKEA 417

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +KK   A V+F  Y+          +  I         + +    Y+V +++      
Sbjct: 418 GFIKKDQPAKVKFDAYSYQDYGVVPGKVSSISSDS---KYDPKLGNVYQVEVELERHHIV 474

Query: 400 DNNIEL--RNGFPAEVLFTAKNTTLAQEIIHPI 430
           DNN  +  R G  A      +   +   ++ PI
Sbjct: 475 DNNKRIKFRPGQSATANIVIRQRRIIDVLLDPI 507


>gi|218440449|ref|YP_002378778.1| secretion protein HlyD [Cyanothece sp. PCC 7424]
 gi|218173177|gb|ACK71910.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7424]
          Length = 550

 Score =  180 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 65/449 (14%), Positives = 159/449 (35%), Gaps = 46/449 (10%)

Query: 7   KNLKRNHPASL-KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +    PA+L +R+    I   +   TW+    IE    +SG+++ +    +I+    G
Sbjct: 79  QAMLDQPPATLPQRLIYGGIAFCLIFGTWAWFGTIEEVGHASGKLIPKGETYKIEPLDIG 138

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + +  V+ G  +  G  L+  +       I+  +  + N +  +  +++ L+ ++ +  
Sbjct: 139 KVSRIAVKEGDTVTAGQVLVELDRQLEEKEIERLEQLLINYQMELAQKQNLLEKISLEAQ 198

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             +   +++E +    + +      K     +    R      TR   +       + + 
Sbjct: 199 TYQAISQAQENEQRAAIAQAKEKI-KTTQEILLLQQRQYSAYQTRQDYLQPLSGTAQERL 257

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL-----------RENI 234
             L   L  HQK +  +++L E+ AVSQ  + Q E+ +  +  ++           +E +
Sbjct: 258 EELEKELLEHQKRIEKLQSLVEEGAVSQEYVFQAEQAMRATKQQILQSQLQEGNNVKEQL 317

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISR----------------------------DL 266
            + +  LR +     +   E     KE  R                            ++
Sbjct: 318 FQAQQSLRDLQTNITQKQGELNTAFKEAERLESELTSKQAQAQQTQLQYQQQKQKLALEI 377

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            Q Q    +  + L   +   + K + +P+ G ++     ++    +    + +I P   
Sbjct: 378 TQIQGKITETQNLLVTAKTKLQYKYLKAPVDGVVLSLNIQNTGKVVETGNTIAEIAPEGV 437

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A +  ++   V+KG    ++F  Y           +  I       ++  +    
Sbjct: 438 PLELSATLVNREAGFVQKGMPVQIKFDAYPYQDYGIISGKVSSISEDAKTDEDLGEV--- 494

Query: 387 YEVILKITDLAFSDNNIEL--RNGFPAEV 413
           Y+V +++      +N   +  + G  A  
Sbjct: 495 YQVKVELEQNYIQENQQPIQFKAGQTASA 523


>gi|257061197|ref|YP_003139085.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8802]
 gi|256591363|gb|ACV02250.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8802]
          Length = 509

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 66/463 (14%), Positives = 159/463 (34%), Gaps = 42/463 (9%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
            K+L    P    R  L  ++  + +   W++L  ++ +  + G++  +   +++ +P  
Sbjct: 41  TKDLLDTLPRVWTRGLLYFLVIFVSIALPWAMLAKVDETGKAIGKLEPKAKTLKLDAPVD 100

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V+ G  +  G  L+  E       +   +  ++     +         L   +
Sbjct: 101 GKIAFINVKEGDIVKPGQRLIEIESELIQGDLKQHQTKLEGEEQRLHQLNILEKQLQLVF 160

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              ++  E+++ + L  + +      ++ N    S     + K  ++     +    +  
Sbjct: 161 QTQQQQNEAQKLEKLAQVNQARQNLDQLRN----SYGLQKEEKQAQVNQAQQDLEHNQKA 216

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNML 241
             L    L + Q       +  E+  VSQ  + ++E  V +      + + +I + K+ L
Sbjct: 217 VKLAEIQLKNAQGVKDRYSSAVEEGIVSQIQVVEREDTVQERKKTYEQAKSDIEQAKHRL 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQ------------------------------- 270
                 Y+    + +  +KE    L++ +                               
Sbjct: 277 AEQKSSYERTIKQASADIKEAELRLKEQENSYDSLVQSGELSLLKNKEQINNLQTEMTTL 336

Query: 271 -RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                   S++  L+    Q+ + +P+AGT+      +     Q    L++I P      
Sbjct: 337 KSDIKQTKSQIQNLQFQLSQRVVKAPVAGTVFDLPIEAEGAVVQPGNRLLEIAPQGTPLI 396

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +RA++   +   V KG    ++F  Y        +  + ++ P  S+ D +      Y++
Sbjct: 397 LRAQMATSESGSVTKGMPVKIKFDAYPFQDFGIIEGKLIEVSPTTSEIDTSEGKTLAYDL 456

Query: 390 ILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +++           I LR G  A      +   +   ++ P 
Sbjct: 457 KIELNQTCMPTPKECITLRPGDTAIAEVIIRQRRMIDFVLDPF 499


>gi|332705500|ref|ZP_08425578.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
 gi|332355860|gb|EGJ35322.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
          Length = 517

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 67/465 (14%), Positives = 166/465 (35%), Gaps = 42/465 (9%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  K L    P    R  L  +I  IG+   W+I   ++ +  + G +      +++ +P
Sbjct: 47  YATKELLDTLPQVWTRGLLYFLIVFIGIALPWAIFAQVDETGKARGRLEPTGETIKLDAP 106

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G +   +V+ G  +  G  LL  E    +  +  ++  ++  +  ++  +   + L  
Sbjct: 107 VAGTVAAIKVKEGELVTAGQTLLELESELVSTELQQEQKKLEGQQNRLNQLEVLKNQLIL 166

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                E+  +++E +    + +      + F +  S     L  ++ + R    +    +
Sbjct: 167 ALRTQEQQNQAQELEKQAQVEQARQNL-EAFKFAYSLQKEELLAQIDQARQAIESS---K 222

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN-------QQERIVYKSTLELRENIH 235
               L    L S Q+ +   +N +++  +S+           + E+ + ++ LE+++   
Sbjct: 223 VAYELETIRLESAQEKIPRYQNAYKEGVLSKERFLDVQQSAKEAEKTIIRTELEIKQAQS 282

Query: 236 EQKNMLRHINELYDEAN----------------------------LEFANYLKEISRDLE 267
             K       +   +A+                            L+    LK I   + 
Sbjct: 283 RLKEQQGTYQKTIHQASADIKQSRLRLQEQERSYKTLVHSGKLALLKSEEQLKNIETQIT 342

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +   +   S++  LE   +Q+ + +PI G +  +   S+    Q    +++I P    
Sbjct: 343 TLKAEASQTKSQIKSLEIQLKQRMLAAPIEGIVFQSPIKSAGAVVQPGDTIVEIAPKGSF 402

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +RA++   +   +++G    ++F  Y        +  + KI P     +        Y
Sbjct: 403 LSLRAQIAISESGSLREGMAVKMKFDAYPFQDYGVVEGKVIKISPTSKLTETEQGKVPTY 462

Query: 388 EVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           ++ +++           I LR G  A      +   +   ++ P 
Sbjct: 463 DLEIQLNKTCMPTPKECIALRPGDTATAEVIVRQRRIIDLVLDPF 507


>gi|218247467|ref|YP_002372838.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8801]
 gi|218167945|gb|ACK66682.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8801]
          Length = 509

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 66/463 (14%), Positives = 159/463 (34%), Gaps = 42/463 (9%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
            K+L    P    R  L  ++  + +   W++L  ++ +  + G++  +   +++ +P  
Sbjct: 41  TKDLLDTLPRVWTRGLLYFLVIFVSIALPWAMLAKVDETGKAIGKLEPKAKTLKLDAPVD 100

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V+ G  +  G  L+  E       +   +  ++     +         L   +
Sbjct: 101 GKIAFINVKEGDIVKPGQRLIEIESELIQGDLKQHQTKLEGEEQRLHQLNILEKQLQLVF 160

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              ++  E+++ + L  + +      ++ N    S     + K  ++     +    +  
Sbjct: 161 QTQQQQNEAQKLEKLAQVNQARQNLDQLRN----SYGLQKEEKQAQVNQAQQDLEHNQKA 216

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNML 241
             L    L + Q       +  E+  VSQ  + ++E  V +      + + +I + K+ L
Sbjct: 217 VKLAEIQLKNAQGVKDRYSSAVEEGIVSQIQVVEREDTVQERKKTYEQAKSDIEQAKHRL 276

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQ------------------------------- 270
                 Y+    + +  +KE    L++ +                               
Sbjct: 277 AEQKSSYERTIKQASADIKEAELRLKEQENSYDSLVQSGELSLLKNKEQINNLQTEITTL 336

Query: 271 -RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                   S++  L+    Q+ + +P+AGT+      +     Q    L++I P      
Sbjct: 337 KSDIKQTKSQIQNLQFQLSQRVVKAPVAGTVFDLPIEAEGAVVQPGNRLLEIAPQGTPLI 396

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +RA++   +   V KG    ++F  Y        +  + ++ P  S+ D +      Y++
Sbjct: 397 LRAQMATSESGSVTKGMPVKIKFDAYPFQDFGIIEGKLIEVSPTTSEIDTSEGKTLAYDL 456

Query: 390 ILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +++           I LR G  A      +   +   ++ P 
Sbjct: 457 KIELNQTCMPTPKECITLRPGDTAIAEVIIRQRRMIDFVLDPF 499


>gi|158334921|ref|YP_001516093.1| HlyD family secretion protein [Acaryochloris marina MBIC11017]
 gi|158305162|gb|ABW26779.1| HlyD family secretion protein [Acaryochloris marina MBIC11017]
          Length = 434

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 63/442 (14%), Positives = 148/442 (33%), Gaps = 41/442 (9%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           HF+ ++      +    M  + ++ + G  +  S  L   I+V +   I     +  ++S
Sbjct: 10  HFVQEDEFLPSISPWISMGGMVLVLVFGAAVAISSTLKFSITVKAPAAIRPAGGLSIVQS 69

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G I    VE    + +G      +D          +  I+++        + L  L+
Sbjct: 70  GIDGTITHINVEENQVVKKGDLFAQLDDSGLQTRKSQLQGDIQSITLQRYQINAQLRALD 129

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++  + E    SR                        S+  +     +  R     ++  
Sbjct: 130 HQI-IAETRLVSR------------------------SIAAAEANLTSHRRRYQDLKIST 164

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E      +A      ++    K L E  A+++  + ++E  +  ++  ++          
Sbjct: 165 EADLEEAQAGYHLASEEYLRFKELEESGAIAKLQVKEKEASLKAASARIKRLKAATNPSD 224

Query: 242 RHINELYDEANLEFA----------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             I++  ++   E A             +++ R   + Q+       +L  ++   +   
Sbjct: 225 ATIDQALEQIAQEKARGSVTLAGLNQQKEQLMRTRIEAQKQLQRTQKELQQIDNELKGTK 284

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +PI GT++     +     Q   P+ +I P +    I+A+V  + I  VK G    +R
Sbjct: 285 IRAPIDGTVLQLNLRNPGQVVQPGIPIAQIAPRNAPLIIKARVNAQDINQVKTGQMVQMR 344

Query: 352 FPHYADIREKKFKAIIEKIDPI---ISQQDNNLQTQEYYEVILKITDLAFSDNNI--ELR 406
                       +  +  + P    ++       +  +YEV ++   L   +      L+
Sbjct: 345 VSACPYTDYGTLQGTVMNVSPDAIPVNDASGPATSPAFYEVTVQPRTLYMGNQQRWCRLQ 404

Query: 407 NGFPAEVLFTAKNTTLAQEIIH 428
            G        ++  T+ Q ++ 
Sbjct: 405 FGMEGRADIVSRQETVLQFVLK 426


>gi|159029160|emb|CAO87520.1| hlyD [Microcystis aeruginosa PCC 7806]
          Length = 589

 Score =  179 bits (454), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 77/529 (14%), Positives = 177/529 (33%), Gaps = 115/529 (21%)

Query: 17  LKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             R  + +++ +    + WS    IE  V + G++  +  V E+++P +G++++ +V++G
Sbjct: 58  WSRTIIWTLMSVTTAALIWSAFAKIEQVVGAQGQLKPQGKVQEVQAPVNGVVQEVKVKDG 117

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLR----------------CHIDTEKSALDF 119
            ++ +G  L+  +   +   ++  K                         +++  + L  
Sbjct: 118 DRVNKGDVLVLMDSSASQVQLESLKKIRATAEKENQFYRLLMAQDLTPAAVESSIAQLKL 177

Query: 120 LNNKYDVLE-KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +   D+   +A    E QL        ++ S +    ++ +  + +   +R  +  L  
Sbjct: 178 PSEIADLARNRAALVAENQLYQAQINEGASSSALQGEELARLEAARREANSRQAAARLEM 237

Query: 179 LDLENKSSLLRALLSSHQKDL--------------------------------TMMKNLF 206
             L  + +  R  L+  +  L                                  ++ L 
Sbjct: 238 EQLAKQLNQTRVQLADARSQLIKDRLVLEEIKTRNANSMKQGQEGLDIERNILKDIEPLG 297

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIH-----------EQKNMLRHINELYDE----- 250
           ++ AV++  +N+Q++ V     EL++              E +  +  I+ L  E     
Sbjct: 298 DEGAVARYQINKQKQSVTDRQNELQQQEANGKIDREKQEKEVQTRIAEISRLEQEEKRYS 357

Query: 251 ---------------------------ANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                                           A    +ISR +  N +  A+  S+++  
Sbjct: 358 LLISQAREKLINTTVITEKDVRDKMADNQKRIAEIDSQISRVIIDNNKRIAELDSQISQA 417

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKL----------TYIR 331
           ++T + + I +PI G +   ++       Q   ++ L+KIVP                  
Sbjct: 418 QQTIKYQKITAPIDGVVFDLKAR-PGFVPQPSQAEALLKIVPDGCPTQIKDAAKGCLVAE 476

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             VT + I  V+ G    +R   ++       K  +  I       D N +   +  V +
Sbjct: 477 VDVTNQDIGFVRVGQKTDIRIDSFSYSEYGDIKGEVISIGSDALPPDENHRFYRF-PVRV 535

Query: 392 KITDLAFSDNN---IELRNGFPAEVLFTAKN-TTLAQEIIHPITDNWPK 436
            ++       +   + L++G    V        T+        TD + K
Sbjct: 536 SLSSQELVLKDKSTLPLQSGMSVSVNIKVNENRTVLG----LFTDMFNK 580


>gi|126658944|ref|ZP_01730086.1| hypothetical protein CY0110_26617 [Cyanothece sp. CCY0110]
 gi|126619742|gb|EAZ90469.1| hypothetical protein CY0110_26617 [Cyanothece sp. CCY0110]
          Length = 515

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 63/461 (13%), Positives = 163/461 (35%), Gaps = 34/461 (7%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  K +    P    R  L  ++  +G+   W +L  ++ + ++ G++  +   V++ +P
Sbjct: 45  YSTKEILDTLPCVWTRGLLYFLVIFVGVALPWVMLAKVDETGTAKGKLEPQGKTVKLDAP 104

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +    ++ G  +  G  L+  E       +  ++  ++  +  +   +     L  
Sbjct: 105 VEGKVSLILIKEGDTVKGGERLMEIESDLIKADLKQEQTKLEGQKERLSQLQILGQQLQL 164

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY-------GISSVYRSLKMKLTRMRSIY 175
            +   E+  ++++ + +  + +  +   ++ N          + V ++ +      R+I 
Sbjct: 165 VFQTQEQQNQAQKLEKVAQINQAKANLDRLKNAYHLQKQEKQAQVSQAKQDLDHNQRAIQ 224

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYKSTLELRE 232
           L ++ LEN   +     S+ ++ +     + EK    Q       Q +  + ++   L E
Sbjct: 225 LAKIQLENAKGIKARYDSAIEEGIVSQIQVVEKEDALQERRKAYEQTKSDIEQAKHRLAE 284

Query: 233 NIHEQKNMLRHINELYDEANLEF---------------------ANYLKEISRDLEQNQR 271
                +  L        EA+L                          +K +  ++     
Sbjct: 285 QQSSYQQTLEKAKADIKEADLRLKEQENSYDSLVGSGELSLLKNQEQIKNLETEITTLNS 344

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 S++  L     Q+ I +PI GT+      +  +  Q    +++I P      ++
Sbjct: 345 DIEQTKSRIESLNYQLSQRVIKAPIEGTVFDLPIDTEGSVVQSGTRILEIAPQGTALILQ 404

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A++   +   V KG    ++F  +        +  + ++ P   + + +      Y++ +
Sbjct: 405 AEMATAESGSVTKGMPVKMKFDAFPFQDYGVIEGKLIEVSPTTKEIETSDGKTLVYDLTI 464

Query: 392 KITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           ++        +  I LR G  A      +   L   I+ P 
Sbjct: 465 ELAQTCMPTPEECINLRPGDTAIAEVVVRQRRLIDFILDPF 505


>gi|148238465|ref|YP_001223852.1| multidrug resistance efflux pump [Synechococcus sp. WH 7803]
 gi|147847004|emb|CAK22555.1| Multidrug resistance efflux pump [Synechococcus sp. WH 7803]
          Length = 383

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 78/421 (18%), Positives = 149/421 (35%), Gaps = 45/421 (10%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M  ++      +  W+    ++ ++S  G +    +V E+ SP +G++KK  V  G  + 
Sbjct: 1   MVWITSGLFTAVFVWAFTAKVDQTISVRGRLQPTGSVQEVDSPSTGVVKKVFVSEGQLVQ 60

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G PLL  E        +  + S + LR    T ++    + +  D+ +        Q+ 
Sbjct: 61  AGEPLLDVEAKGLASRREAIEQSQQILRLQARTLEA---VIRSNGDITKMPPLPPIPQVA 117

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D                   +   L     +   I      ++ + +     L   Q+  
Sbjct: 118 D-----------------PELANKLATARNQTLQIRAQLQQIDTRLASRNVSLRLKQRIA 160

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +K LFE  A+++N    Q   V +   ++     E+  ++                  
Sbjct: 161 DDVKPLFESGAMARNAYLSQLNEVQELRADIATLQEEKVRVIGA---------------- 204

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
              S  L +  R   +  S+L  L++T   +TIL+PIAG +   Q     +     Q L+
Sbjct: 205 --ASTQLNEVNREIINLRSELVGLKETISYRTILAPIAGRVFDTQV-GPFSVVGTDQVLL 261

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           KIVP +       ++    +  VK G  A+V    +        K  +  I     + D 
Sbjct: 262 KIVPENS-LEANVEIPNSDVGFVKVGMPASVSVDSFPSGEFGYIKGTLSSIGSDALKPDQ 320

Query: 380 NLQTQEYY-EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             Q  ++   + L+   +   D  + L++G         ++          ITD + K F
Sbjct: 321 TAQQYQFPGVITLEQQSVQSGDQELNLQSGMGVTANIKLRSRPAIS----IITDLFTKQF 376

Query: 439 E 439
           E
Sbjct: 377 E 377


>gi|218248023|ref|YP_002373394.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8801]
 gi|257060653|ref|YP_003138541.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8802]
 gi|218168501|gb|ACK67238.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8801]
 gi|256590819|gb|ACV01706.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8802]
          Length = 549

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/438 (13%), Positives = 150/438 (34%), Gaps = 44/438 (10%)

Query: 8   NLKRNHPASL-KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +L    PASL +R+    I   +   TW+    IE    + G+++ +    +I+    G 
Sbjct: 79  DLLDQPPASLPQRLIYGGIAFCLAFGTWAWFGTIEEVGHAQGKLIPQGETYKIQPIELGK 138

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K  +V+ G ++  G  ++  +       ++  +  +   +  +  ++  L+ +  +   
Sbjct: 139 VKSIEVKAGEEVQAGQVIMELDTELAQKEVEQHQQMLAAYQLELAQQQMLLERVQLEAQT 198

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                 + +      +       +    + +           +R R +         +  
Sbjct: 199 RAAMASAEQNAQRSAIALTQEKIATT-RHLLGQQQSEALAYRSRQRQLQPLTSTAHERLE 257

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQ--------------------------------- 213
            L+  + +HQ  L  +K L E+ AVSQ                                 
Sbjct: 258 QLQGEVLAHQARLERLKPLEEEGAVSQDYIFQAEQELRQTQQRITQSVLQEVPSTQEQLF 317

Query: 214 ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA---NLEFANYLKEISRDLE 267
                L   +R + ++  +L     + + +   +++   +A    LE     +E+   + 
Sbjct: 318 QADQSLRDLQRQITENKGDLTAAFKDAERLTAELHQKQAQAEQMQLEAQQKAQELEVAIT 377

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q +   AD  + L   +   + K + +P+ G ++      +    +  + + ++ P+   
Sbjct: 378 QLRGKIADTQTLLLAAQAKLKYKFLKAPVDGVVLSLDVKRTGEVIEAGKIVAQVAPNGVP 437

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + A +  ++   V+ G    V+   Y           + KI       +++ +  E Y
Sbjct: 438 LVLSALLPNREAGFVELGMPVQVKLDAYPYQDYGIVSGQVTKISEDA---ESDEKLGEVY 494

Query: 388 EVILKITDLAFSDNNIEL 405
            V + +      DN  ++
Sbjct: 495 RVEVDLDRDYIQDNQQKI 512


>gi|226328859|ref|ZP_03804377.1| hypothetical protein PROPEN_02760 [Proteus penneri ATCC 35198]
 gi|225202045|gb|EEG84399.1| hypothetical protein PROPEN_02760 [Proteus penneri ATCC 35198]
          Length = 243

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 93/243 (38%), Gaps = 2/243 (0%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           ++  +      +  I    + L+  +   +  ++S +  +  +  L  +  + ++   + 
Sbjct: 1   MHSEINGYNAIIDGISNRLIHLKKSTINKQHQINSLKNQIKDLYILANEGYIPRHRYQEI 60

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           ER + ++   L +   +   + +   E   + +   AN+ +    +L Q Q   ++   +
Sbjct: 61  ERELAENNNHLNDTYGQISTLEKQKLEYQQKISQRNANFYQSARTELNQVQLQISETEKQ 120

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L I     ++  I +PI+G ++    F+     +  Q LM IVP      I A++ P  I
Sbjct: 121 LIIEIDKLKKMQITAPISGIVMDLSVFTQGGVVRTGQTLMDIVPQDHQLIIEARLAPHLI 180

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             V  G    + F  +      K    +  I       +    T+ YY+V + + D    
Sbjct: 181 DKVTLGLPVDLMFSAFNQNTTPKIPGEVTLISADRLIDERT--TEPYYQVFINVKDNDLL 238

Query: 400 DNN 402
            ++
Sbjct: 239 TDD 241


>gi|225677245|ref|ZP_03788234.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590714|gb|EEH11952.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 249

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 85/249 (34%), Gaps = 19/249 (7%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +          ++L   + L +   +S+  +   E+   +    +         + + 
Sbjct: 3   QLNAAHKQYDVITEELETKRQLLDSGHISKPHILALEKQFAEIEGRVGHYRSAISQVQQK 62

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I E   E      +  +  + +L++   + AD   +L + E +  +  I SP  G +   
Sbjct: 63  IGENELEIINVRNDSQERANAELKEVSTSIADLKERLMVAEDSLARTIIKSPQDGIVTDI 122

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------------KKGYTA 348
           +  +     Q   P+M +VP      I AK+  + I+ +                +G   
Sbjct: 123 RYHTEGGVIQSGVPIMSVVPSDDDLIIDAKIQTRNIEEILSAQKKDSNIVSIDGLEGLKV 182

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRN 407
            VR   Y+  R      I+  I P         +   YY V + I     +   N+ L  
Sbjct: 183 KVRLSAYSARRLSLINGIVSNISPDALDD---PRLGRYYSVRVVIPKPELAQFKNVYLYP 239

Query: 408 GFPAEVLFT 416
           G PAEV   
Sbjct: 240 GMPAEVYIV 248


>gi|213583486|ref|ZP_03365312.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-0664]
          Length = 185

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 62/183 (33%), Gaps = 8/183 (4%)

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           Y  +    L +         + L   E +  + TI SP+ G +   Q  +       +  
Sbjct: 1   YYVQAREALSKANAEVDMLSAILKGREDSVTRLTIRSPVRGIVKNIQVTTIGGVIPPNGE 60

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E I P   Q 
Sbjct: 61  MMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQD 120

Query: 378 DNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
               +   YY V ++       +       +  G  A V       T+   +I P    +
Sbjct: 121 KVKPEI-FYYRVFIRTHQDYLQNKSGRRFSIVPGMIATVDIKTGEKTIVDYLIKP----F 175

Query: 435 PKI 437
            + 
Sbjct: 176 NRA 178


>gi|87123262|ref|ZP_01079113.1| possible transporter component [Synechococcus sp. RS9917]
 gi|86168982|gb|EAQ70238.1| possible transporter component [Synechococcus sp. RS9917]
          Length = 406

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 60/425 (14%), Positives = 146/425 (34%), Gaps = 66/425 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +++ +     L+ +T   +   +  I W  +   E  V + G++    +V +++ P  G+
Sbjct: 31  ESVLQQSHIWLRSVTWALVGTTVIGIGWLAIARTEEVVVAQGKLEPVGDVKDLQIPSGGV 90

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K   V++G ++ +G  L+  +   ++  +                              
Sbjct: 91  VKAILVKSGERVKKGQVLIELDQKSSSQEL------------------------------ 120

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                +  +          +    +  + RS  +NR     + S
Sbjct: 121 ----------------KSLQESQRQKQQQLQQKQQQLALKQQEKQRSAEINR----EQIS 160

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L A L+  +K L  +  L ++ A S+    QQ+  V +    + + + E +     +N+
Sbjct: 161 SLEARLALEEKILNRLTKLAQEGASSELQYLQQQNKVEELRGNVSKELVEGRRQQSVLNQ 220

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++ N E A    +            A   S++T  E T   +++ +P+ G +   +  
Sbjct: 221 EVEQINAEIAGLRSD-----------LAQLRSQITEAEVTLGYQSLRAPVDGVVFDLKLT 269

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +    AQ  +P +K+VP +       ++   +I  V++G  A +    +        +  
Sbjct: 270 TPGFVAQTGEPALKVVPFN-TLEADVEIPSSKIGFVRQGQPAEISIDSFPATDFGVLEGS 328

Query: 367 IEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTL 422
           +  +       D      EY +   + +           N+ L+ G         ++ + 
Sbjct: 329 VSSVGSDALAPDAQKGRDEYRFPATITLDSQQLKLKNGTNLPLQVGMSLTANIKLRSVSY 388

Query: 423 AQEII 427
            Q ++
Sbjct: 389 LQLLL 393


>gi|282898871|ref|ZP_06306857.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
 gi|281196244|gb|EFA71155.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
          Length = 511

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/465 (13%), Positives = 158/465 (33%), Gaps = 42/465 (9%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  + L    P    R  L  ++    +   W +   I+ + S+SG +  +    ++ S 
Sbjct: 41  YGTEELLDALPKVWARSMLYLLVTFTAVALPWIMFSQIDETGSASGRMEPKGATHKLDSS 100

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +    V+ G+++  G PL+  E       +   +  ++ L       ++ ++ L N
Sbjct: 101 VMGSVVAVNVKEGAKVKAGQPLMEIESQLLRTQLQEAQAKLEGLVNR----QTQVELLYN 156

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  +     + + +          +   +  +   S+       +LT++  +  N    +
Sbjct: 157 QVLLAINIQKQQNQSQSLEKLAQLNQARENLDAKQSAYQLQKLERLTQVEQVKQNIQSTQ 216

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI--------------VYKSTL 228
               L    L     ++     L ++  + Q    + E+               + +++L
Sbjct: 217 IAYGLAENRLRRDSLEIARYNQLLQEGIIPQTRFVEIEKTAEDSQRLRQEASSNLQRASL 276

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANY---------------------LKEISRDLE 267
           +LRE ++   +++  +     +A L                          LK++   + 
Sbjct: 277 QLREELNRYNSVMNQLRSEIQQAKLRLQEQESSYQSIIQAGKLTVLKNQEQLKDLQTQIS 336

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +   +   S++  L+   +Q+ + SP+ G +            Q  Q + +I P    
Sbjct: 337 GIKSEISQTKSQIKSLQLQLQQRILRSPVDGIVFELPIKKPGAVVQVGQMVAQIAPKDAN 396

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++A++  +Q   +K G    ++F  Y        +  +  I P      N   + E Y
Sbjct: 397 LILKAEIPSQQSGFIKVGMPVKIKFDAYPFQEYGVTQGRVLWISPDAKVSPNRPTSVETY 456

Query: 388 EVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           ++ + +        D  I L  G  A      +   +   I+ P 
Sbjct: 457 QLEIALEKPYIKSGDKPIPLIPGQTATAELIVRQRRVMDLILDPF 501


>gi|218245403|ref|YP_002370774.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8801]
 gi|257058439|ref|YP_003136327.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8802]
 gi|218165881|gb|ACK64618.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8801]
 gi|256588605|gb|ACU99491.1| secretion protein HlyD family protein [Cyanothece sp. PCC 8802]
          Length = 576

 Score =  177 bits (450), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 78/515 (15%), Positives = 187/515 (36%), Gaps = 104/515 (20%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + R  P   + +    +      + W+ +  IE  V++ G++  +D V EI++P +G+++
Sbjct: 50  ILRQSPIWSRAVVWTIVGVTTASVIWAAVATIEQVVTAKGQLKPQDTVKEIQAPLNGVVE 109

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLI-------------------------------- 96
           +  V++G ++ +G  L++ +   T   +                                
Sbjct: 110 EVLVKDGDRVKKGQVLVSMDSESTKAELVSLTKVKQSLQQENKFYRTLMNQSLDPLQVQT 169

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           ++ K+ +      +   +++L   N  Y +      +  E  LD + +  +  +++ +  
Sbjct: 170 EIIKLKLPPEVAALALNRTSLIVENQLYGIQLGESSAGSELSLDQVARLRAAKAELDSRA 229

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD------------------ 198
           +++    ++    ++R   +   D + + +  + +L+  Q+                   
Sbjct: 230 MAAQL-EMEQLEKQLRQTQVQLADAKKQLTDDQKVLAEIQQRNTEARAEAQKALKIEEGI 288

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH----------------------- 235
           L  ++ L E+ A++Q  + +Q++ + +    L E I                        
Sbjct: 289 LKNVEPLLEEGALAQLQVEKQKQAIAERRQRLTEQIANGTIEYDKQRQQIQDRTAEIARF 348

Query: 236 --EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL---------- 283
             E++ +   I +   + N       KE+   + QN++  AD  S+LT +          
Sbjct: 349 EQEERRLELAIAQANAKLNNTVVLTEKEVRDKISQNKQRIADIDSQLTKIIVENDKKIAE 408

Query: 284 --------EKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVPHSKLTYIRA 332
                     T + + I +P++GT+   ++ +   Y      ++PL+KIVP         
Sbjct: 409 TDSEISRTNVTLKYQEIKAPVSGTVFDLKATT--GYVPPPNQTEPLLKIVP-DDQLVAEV 465

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            VT + I  V+ G  A +R   +        K  +  I     +  N +     +   +K
Sbjct: 466 DVTNEDIGFVRTGQKADIRIDSFPFSEFGDIKGEVIAIGSDALE-PNEIHKYYRFPTKIK 524

Query: 393 ITDLAFS--DNNIELRNGFPAEVLFTAKN-TTLAQ 424
           + +         I L++G    V    +   T+  
Sbjct: 525 LDEQVLRSSGREIPLQSGMSVSVNIKVRENRTVLS 559


>gi|153206949|ref|ZP_01945767.1| type I secretion membrane fusion protein, HlyD family [Coxiella
           burnetii 'MSU Goat Q177']
 gi|120577022|gb|EAX33646.1| type I secretion membrane fusion protein, HlyD family [Coxiella
           burnetii 'MSU Goat Q177']
          Length = 357

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 126/329 (38%), Gaps = 3/329 (0%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + ++    +   I W+  + I+    + GEI   + +  ++    G++ +  V+ GSQ+ 
Sbjct: 27  LAIIICGILAAFIIWAYFVRIQELSLAVGEITPVNRISVVEHLEGGLVYQILVDEGSQVK 86

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G PL   ++      +   +     L  +++ EKS ++  +    +   A  + E  + 
Sbjct: 87  KGQPLAKIDETLAKAELQQLEAKRLTLMSNVEREKSLIEKTDFSPTLPATAVHNNEPDIS 146

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             + +      ++      ++     + + ++       L L  +    +     H++++
Sbjct: 147 --VNEILERQQQLHQIQSQALNAQQAVIVQQILQREEELLKLRQQLETAKKNAVLHREEV 204

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           TM + L E   +S+ DL + E  +  +   + E   E     + + E            +
Sbjct: 205 TMFRKLIEPGYISRLDLIRAECSLNTAEGTVTELTKEISIAKQALQEAESRLTELIQTEM 264

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++++  L+++Q         +  L+       + +PIAGT+V  +  +           M
Sbjct: 265 QKMADRLQRSQHELFQVQFAIQKLKYHLANTVVRAPIAGTVVNMKI-TEGKVLAAGGFAM 323

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
            IVP +       ++ P  I  ++ G   
Sbjct: 324 NIVPLNAPLRAEIRIRPADIGFIRIGDPV 352


>gi|282897586|ref|ZP_06305586.1| Secretion protein HlyD [Raphidiopsis brookii D9]
 gi|281197509|gb|EFA72405.1| Secretion protein HlyD [Raphidiopsis brookii D9]
          Length = 511

 Score =  176 bits (447), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 67/465 (14%), Positives = 157/465 (33%), Gaps = 42/465 (9%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  + L    P    R  L  ++    +   W +   I+ + S+SG +  +    ++ S 
Sbjct: 41  YGTEELLDALPKVWTRSMLYLLVSFTAVALPWIMFSQIDETGSASGRMEPKGATHKLDSS 100

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +    V+ G+++  G PL+  +       +   +  ++ L       ++ ++ L N
Sbjct: 101 VMGSVVAVNVKEGARVQAGQPLMEIDSQLVRTQLQEAQAKLEGLVNR----QTQIELLYN 156

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  +     + + +          +   +  +   S+       +LT++  +  N    +
Sbjct: 157 QVLLAINIQKQQNQSQSLEKLAQLNQARENLDAKQSAYQLQKLERLTQVEQVKHNIQSTQ 216

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI--------------VYKSTL 228
               L    L     ++     L ++  + Q    + E+               + K++L
Sbjct: 217 VAYGLAENRLRRDSLEVARYNQLLQEGIIPQTRFVEIEKTAEDSQRLRQEASYNLQKASL 276

Query: 229 ELRENIHEQKNMLRHINELYDEANLEF---------------------ANYLKEISRDLE 267
           +LRE +    +++  +     +A L                          LK++   + 
Sbjct: 277 QLREELSRYNSLMNQLRSEIQQAKLRLEEQESSYQSIIQAGKLTVLKSQEQLKDLQTQIS 336

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +       S++  L+   +Q+T+ SP+ G I            Q  Q + +I P +  
Sbjct: 337 SIKSEIRQTKSQIKSLQLQLQQRTLRSPVDGIIFELPIKKPGAVVQVGQMVAQIAPKNAN 396

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++A++  +Q   +K G    ++F  Y        +  +  I P      N     E Y
Sbjct: 397 LILKAEIPSQQSGFIKVGMPVKIKFDAYPFQEYGVTQGRVLWISPDAKVSPNGNTRMETY 456

Query: 388 EVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           ++ + +        D  I L  G  A      +   +   I+ P 
Sbjct: 457 QLEIALEKPYIKSGDKPIPLIPGQTATAELIVRQRQVIDLILDPF 501


>gi|254411849|ref|ZP_05025625.1| auxiliary transport protein, MFP family [Microcoleus chthonoplastes
           PCC 7420]
 gi|196181571|gb|EDX76559.1| auxiliary transport protein, MFP family [Microcoleus chthonoplastes
           PCC 7420]
          Length = 533

 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 68/464 (14%), Positives = 166/464 (35%), Gaps = 42/464 (9%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           + K L    P    R  L  ++   G+ + W++L  ++ + S+ G +  + NV ++ +P 
Sbjct: 64  LTKELIDTVPRVWTRGLLYFLVVFAGITLPWAMLSKVDETGSARGRLEPQGNVFKVDAPV 123

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           +G + K  V+ G  +    PLL  E  E    +   +  ++  +  +    + L+ + N+
Sbjct: 124 AGTVAKVLVKEGQLVTNKQPLLELESEEIKSELQQAQTRLEGQQNRL----AQLELMKNQ 179

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +  +  + + +              +      +S     + KL ++     N    + 
Sbjct: 180 LLLGVRTQQQQNQAQSLEKQAQVEQARQNLESLRNSYNLQKEEKLAQVNQANKNLEYSKT 239

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL-----NQQERIVYKSTLE--------- 229
             +L    L+  Q+++   + + E+  V +  +       QER   +   E         
Sbjct: 240 ALNLAEIRLAKAQREVQRYRQIQEQGVVPEIKVVEQEDLAQERQRLQEQAESDVQQAKLR 299

Query: 230 -------LRENIHEQKNMLRHINELYDE--------------ANLEFANYLKEISRDLEQ 268
                   +  IH+ ++ +        E              A L+    LK++   +  
Sbjct: 300 KEEQQSSYQRIIHQAQSDIEQAKLRLQEQEKSYQSLIHSGKIAILKSEEQLKQLQTQITA 359

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +   A   S++   E    Q+ + +P++GT+       +    Q +  + +I P +   
Sbjct: 360 LKAEIAQSKSQIQAWEFQLGQRVLRAPVSGTVFQLPIQRTGAVVQPTTLIAEIAPKNASL 419

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +RA++   +   +++G    ++F  Y        +  + +I P     +        ++
Sbjct: 420 ILRAQMATSESGTLREGMLVKMKFDAYPFQDYGVIEGTVSQISPTSKVTETEQGAIATFD 479

Query: 389 VILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           + +++    +  S     L  G  A      +   +   II+P 
Sbjct: 480 LEIELEQTCIQTSQGCTALTPGQTATAEVIVRQRRIIDFIINPF 523


>gi|268609914|ref|ZP_06143641.1| multidrug resistance efflux pump/hemolysin secretion transmembrane
           protein, putative [Ruminococcus flavefaciens FD-1]
          Length = 415

 Score =  175 bits (443), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/435 (15%), Positives = 157/435 (36%), Gaps = 49/435 (11%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M + ++R    +   + +     +I  + W+ L   ++  ++SG I    N+  + +  S
Sbjct: 28  MLEIIERPAHKAGSVIIIGVFTLLIAAVIWACLSKTDVVTTASGTIQPVGNISSVNAYAS 87

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K    E G+ +  G  L+  +       ID     ++ L+      K   D ++   
Sbjct: 88  GTVKAINAEEGAYVKAGDVLIELDTQSIDIDIDNINNQVEVLKAQ----KKIYDMISAGK 143

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DV             D    ++S+  + +   I+   ++    L+ + S   N       
Sbjct: 144 DV------------SDISVTHYSSSLQPYITAITETDKAYHNNLSILESAKEN------- 184

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + L R + +   ++     +      VSQ + + Q+ +V ++  +  +   E   +   I
Sbjct: 185 AGLTRDIANIKLEEFKNNDS------VSQAEYDAQKLVVKQAENDYIQ--AETNVLKAQI 236

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                       +Y ++I+  + +          +L     + E + I +P+ G I    
Sbjct: 237 ------------SYSEQINSQISEITGKLKQAEFELEKYNLSIENQKITAPVNGYINTIS 284

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +  +    +Q ++ +VP      +   +    I  +K G  A ++   Y   +    K
Sbjct: 285 VNNIGDTVTAAQQVITLVPADIPVEMVCYIKNMDIADIKTGMEAEIKLEAYPYNKYGTVK 344

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             ++ I P      N  +    Y V L + +   ++ +I + +G    V       ++  
Sbjct: 345 GTVKYISPSSF---NTEKMGSVYLVKLDVEN---TNPDINVMSGLSGTVEVKLDRRSVMS 398

Query: 425 EIIHPITDNWPKIFE 439
             + PIT  + +  +
Sbjct: 399 YFLEPITKGFKESLK 413


>gi|33862367|ref|NP_893927.1| transporter for efflux [Prochlorococcus marinus str. MIT 9313]
 gi|33640480|emb|CAE20269.1| possible transporter for efflux [Prochlorococcus marinus str. MIT
           9313]
          Length = 461

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 60/422 (14%), Positives = 140/422 (33%), Gaps = 31/422 (7%)

Query: 12  NHPASLKRMTLLSII--GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           + P+    + LL+ +   +  L+ WS++   EISV + G +         ++        
Sbjct: 54  DFPSRRWPLILLTSLSGFVGILLVWSLIARSEISVDTQGRLRPSQTPTTSRAFSLTTSST 113

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V+ G  + +G P++  +D      +   +     +   +  E S    LN   D+ + 
Sbjct: 114 IFVKEGDFVQKGQPIMQLDDESLKSKLLALENRYSKIYVELQ-ETSRFIGLNFPSDLPKP 172

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                             +  +     I++    +     R+  + +    LE    L  
Sbjct: 173 KLS----------YSLDLSVVRSSLEFINTQKEKVAQLEARLEQLLVKHKSLEQNIKLQS 222

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            ++  H++       L    A+++  + QQ + +     EL  N  +Q      + E   
Sbjct: 223 IIVEKHER-------LLNSGAIAELQVLQQSQKLQDLKSELESNQQDQIRTRAALRESGS 275

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E      +   +   +L       +   ++++  +       + +P+ G +         
Sbjct: 276 EFTGRNNSLYSQRISEL-------SSIYAEISSTKDAIRNSLLRAPLTGYVFRLAVKVPG 328

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              +  + L +I+P  +L      V  + I  + KG    V    Y        K  ++ 
Sbjct: 329 VPVRPGEELFQIIPS-ELLTASVDVPARDIGFINKGMQVDVHIDSYPSSTYGVLKGTVKS 387

Query: 370 IDPIISQQDNNLQTQEY-YEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEI 426
           I     +  + +Q   Y   V +++   +         L+ G  A V F  +  ++ + +
Sbjct: 388 IGRDSIEPTSPIQLPTYSIPVDVQLQKQSLVSKGKYYPLKPGMTARVSFNLRTVSVFRRL 447

Query: 427 IH 428
             
Sbjct: 448 FD 449


>gi|17229420|ref|NP_485968.1| hypothetical protein alr1928 [Nostoc sp. PCC 7120]
 gi|17131018|dbj|BAB73627.1| alr1928 [Nostoc sp. PCC 7120]
          Length = 512

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 65/465 (13%), Positives = 147/465 (31%), Gaps = 42/465 (9%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  + L    P    R  L  +I   I ++ W++   ++ + S+ G +  +    ++   
Sbjct: 42  YGTEELLDALPQRWTRSMLYLLISFTIIVLPWAMFTKVDETGSARGRLEPQGATQKLGVA 101

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +  +K   V  G+ +  G  LL  E       ++  +  ++ L       +   + L N
Sbjct: 102 VTSSVKAVNVAEGATVKAGQVLLELESDVLQSQVEQAQTRLEELINR----QGQQELLKN 157

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  +     + + +              +  +   S+       KL  +     +    +
Sbjct: 158 QLMLTINIQQQQNQAQELEKMAQVHQAQQNLDARQSTYNLQKLEKLALVEQARQDINTSQ 217

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL------------ 230
               L  + L    K++   + L  + A++Q  + + E+I   S   L            
Sbjct: 218 LGRKLANSRLQRDIKEVLRYRRLLRQGAIAQIKVVELEKIAEDSQRSLLQANSDFTQAQL 277

Query: 231 -------------RENIHEQKNMLRHINELYDE----------ANLEFANYLKEISRDLE 267
                         + + + +     + E              A L     LK++   L 
Sbjct: 278 RLQEKESHYQTTVSQTLADIEQAKLRLQEQQSSYQSLVQTGKLALLRSQEQLKDLQNQLT 337

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             Q       S++   +   +Q+ + SP+ GTI            +  Q + +I P +  
Sbjct: 338 TLQSEIIQTKSQINAFKIQIQQRVVRSPVDGTIFDLPIDKPGPVVEAGQIVAQIAPKNAA 397

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +R+ +  +    ++ G    ++F  Y           +  I P    Q  +    E Y
Sbjct: 398 IILRSSMPSQHSGFLRVGMPVKIKFDAYPFQDYGVLPGRVSWISPDSKIQTTSQGNVEVY 457

Query: 388 EVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           E+ + +        +  I L  G  A      +   +   I+ P 
Sbjct: 458 EMDITLDHPYIQAGNKRITLTPGQSATAEVIIRQRRVIDFILDPF 502


>gi|328676883|gb|AEB27753.1| hypothetical protein FNFX1_0805 [Francisella cf. novicida Fx1]
          Length = 323

 Score =  172 bits (437), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 109/307 (35%), Gaps = 7/307 (2%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           LEK   +  + + D L     +   ++    S++ + + ++ T +       + L NK+ 
Sbjct: 12  LEKLDYNPPQDVTDEL-DIEQSRQLLWQEWQSTIAKLMTLEATMLSKEQEKEISL-NKTH 69

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L A +   ++ L    +L++K AV++ +  +       +  EL     +   +   I E
Sbjct: 70  QLEATIKIIKEKLETYTSLYKKKAVARMEYLEFREKFINTYYELETEKKKDLQLDAEIAE 129

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                    +    +    + Q+++       +L        +  I SPI G +   Q  
Sbjct: 130 ARSNLESYKSETYLKTLEKIRQDKKDLFSAEQELHKATTLNGKNIIRSPIDGVVHEMQIH 189

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +Q LM+IVP  +       V  + I +++KG TA V+   +        +  
Sbjct: 190 TIGAVVTPAQVLMQIVPIDQKLEAEVYVKNEDIGYLRKGQTAEVKVNTFPFAEYGVLEGT 249

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQ 424
           +EKI       +        Y++++ + +          ++  G             +  
Sbjct: 250 VEKISGDAIDDERLGLV---YKLVISLNNSTLHKEGETYKIVPGMAVVAEVKTGTRRVID 306

Query: 425 EIIHPIT 431
               P+T
Sbjct: 307 FFTEPLT 313


>gi|75910579|ref|YP_324875.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75704304|gb|ABA23980.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 515

 Score =  172 bits (436), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 65/465 (13%), Positives = 147/465 (31%), Gaps = 42/465 (9%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  + L    P    R  L  +I   I ++ W++   ++ + S+ G +  +    ++   
Sbjct: 45  YGTEELLDALPQRWTRSMLYLLISFTIVVLPWAMFTKVDETGSARGRLEPQGATQKLGVA 104

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +  +K   V  G+ +  G  LL  E       ++  +  ++ L       +   + L N
Sbjct: 105 VTSSVKAVNVAEGATVKAGQVLLELESDVLQSQVEQAQTRLEELINR----QGQQELLKN 160

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  +     + + +              +  +   S+       KL  +     +    +
Sbjct: 161 QLMLTINIQQQQNQAQELEKMAQVHQAQQNLDARQSTYNLQKLEKLALVEQARQDINTSQ 220

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL------------ 230
              +L  + L    K++   + L  + A++Q  + + E+I   S   L            
Sbjct: 221 LARNLGNSRLQRDIKEVVRYRRLLRQGAIAQIKVVELEKIAEDSQRSLLQANSDFTQAQL 280

Query: 231 -------------RENIHEQKNMLRHINELYDE----------ANLEFANYLKEISRDLE 267
                         + + + +     + E              A L     LK++   L 
Sbjct: 281 RLQEKESHYQTTVSQTLADIEQAKLRLQEQQSSYQSLVQTGKLALLRSQEQLKDLQNQLT 340

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             Q       S++   +   +Q+ + SP+ GTI            +  Q + +I P +  
Sbjct: 341 TLQSEIIQTKSQINAFKIQIQQRVVRSPVDGTIFDLPIDKPGPVVEAGQIVAQIAPKNAA 400

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +R+ +  +    +K G    ++F  Y           +  I P    Q  +    E Y
Sbjct: 401 IILRSSMPSQHSGFLKVGMPVKIKFDAYPFQDYGVLPGRVSWISPDSKIQTTSQGNVEVY 460

Query: 388 EVILKITDLAFSDNNIELR--NGFPAEVLFTAKNTTLAQEIIHPI 430
           E+ + +        N  +    G  A      +   +   I+ P 
Sbjct: 461 EMDITLDHPYIQAGNKRIILTPGQSATAEVIIRQRRVIDFILDPF 505


>gi|161505193|ref|YP_001572305.1| hypothetical protein SARI_03331 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866540|gb|ABX23163.1| hypothetical protein SARI_03331 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 411

 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 79/422 (18%), Positives = 149/422 (35%), Gaps = 25/422 (5%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L R  L   + +  LI +  +  I+I    +G I    + + I SP SG I KF +  GS
Sbjct: 6   LSRKMLAVFMTVAALIVYICVAKIDIVSPGTGVITGASDKLVIVSPDSGFINKFDLRTGS 65

Query: 77  QILQGTPLLT---FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           ++  G  L +    +       ++   +        ++ ++  L  L       E  F +
Sbjct: 66  KVNIGDILFSYTNLDVFHQEKTLNELVLFADRRIVSLEEDQRLLKILLAGEISEESEFST 125

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             +         +   ++ F     S+    K    R   +   + DL ++  LL+    
Sbjct: 126 ENKDFFSQELSAYKLLNEYF-----SLRNEEKNLKLREEKMIEEKNDLHDRLLLLKR--- 177

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
                     NL +     + ++   +  + +   ++        ++   I    +    
Sbjct: 178 --------KGNLLKSARAPEIEIINNKTEISQIISQITTGEISLLSLQNDIKLANNRFRS 229

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN-QSFSSSNYA 312
                L   +  LEQ +R   +   +L +L    +  ++LSP  G I+   +SF   +Y 
Sbjct: 230 SVLEQLNNNAEQLEQLRRERLENRGQLELLRNKIKANSVLSPTNGIILSIERSFEKGSYV 289

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           + SQP+M I   ++   I A++  K    +  G TA +        +       I +I  
Sbjct: 290 ENSQPVMTIKKSNESKVIDARILAKYRPFIFMGTTAKITVNSPGYKKT--LSGEITRISA 347

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
                D     + YY+V +K  D       +E   G    V   +K  TL   I   + D
Sbjct: 348 DSFSDDEKNGAERYYKVEIKPDDKIIVPPELE---GVQVNVYALSKKVTLLNYITALVGD 404

Query: 433 NW 434
           N 
Sbjct: 405 NI 406


>gi|289810637|ref|ZP_06541266.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 155

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 8/152 (5%)

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + TI SP+ G +   Q  +       +  +M+IVP      I  +++P+ I  +  G  A
Sbjct: 2   RLTIRSPVRGIVKNIQVTTIGGVIPPNGEMMEIVPVDDRLLIETRLSPRDIAFIHPGQRA 61

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN---NIEL 405
            V+   Y          ++E I P   Q     +   YY V ++       +       +
Sbjct: 62  LVKITAYDYAIYGGLDGVVETISPDTIQDKVKPEI-FYYRVFIRTHQDYLQNKSGRRFSI 120

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
             G  A V       T+   +I P    + + 
Sbjct: 121 VPGMIATVDIKTGEKTIVDYLIKP----FNRA 148


>gi|306821839|ref|ZP_07455429.1| membrane-fusion protein [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304550121|gb|EFM38122.1| membrane-fusion protein [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 389

 Score =  169 bits (429), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 57/387 (14%), Positives = 131/387 (33%), Gaps = 43/387 (11%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +  E        D  +  I       + +++ ++F N++ +  +   +S E  L++   +
Sbjct: 4   ILLEKYLKGQDTDSLQNYISQQNISNEIKQNLIEFTNSRKESYQTKKQSLE--LVEKQSR 61

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                SK     +      +  +  +M++I             +   +   ++     K 
Sbjct: 62  EQLDISKQELSKLEKNSIIINDRQIQMKNIKDKNGVETVNIEKIEQNIKILKEQEAKYKE 121

Query: 205 LFEKNAVSQND---------LNQQERIVYKSTLELR-------------------ENIHE 236
           L ++ AV + +         L ++E    K+  ++                    + I  
Sbjct: 122 LADQGAVPKQEWEEKKNALDLMEKEYKSQKAKSDIEKNNDYLRWKNTVDEKELNNQEIES 181

Query: 237 QKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           QK  +        EA        +   +E    + + Q+      + L    K+ + +T+
Sbjct: 182 QKIKILQNETKLQEAKSNLNNLESQEKQETLNLIVEKQKQIETLKASLEKANKSIDFQTL 241

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP  G +      +       +Q +M IVP +    + A +  K I  VK+G  A+V+ 
Sbjct: 242 TSPTNGIVQGISLNTVGGVVSPAQSIMSIVPENTPLIVEAMLQNKDIGFVKQGQKASVKI 301

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFP 410
             ++  R    + ++EK+ P   + +N       Y++ +K+           I++  G  
Sbjct: 302 DTFSFQRYGVLEGVVEKVSPDAFEDEN---LGPVYKIKIKLDRDTLPVEGKEIKISPGMS 358

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKI 437
             V        +         D++ K 
Sbjct: 359 VTVEIKTGTRRIIDF----FLDSFIKS 381


>gi|172037271|ref|YP_001803772.1| HlyD family secretion protein [Cyanothece sp. ATCC 51142]
 gi|171698725|gb|ACB51706.1| putative secretion protein, HlyD family [Cyanothece sp. ATCC 51142]
          Length = 579

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 74/510 (14%), Positives = 168/510 (32%), Gaps = 105/510 (20%)

Query: 16  SLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSP--FSGIIKKFQV 72
           S  R  + +IIG+    I W+ +  IE  V + G++  ++ V E+ +P     ++++  V
Sbjct: 57  SWSRGVVWTIIGVTTASIVWAAIAKIEQVVPAQGQLKPQEAVKEVHAPPVGGAVVEEVLV 116

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           ++G ++  G  L+  +   +T  +   +    +L       ++ ++   +  DV     +
Sbjct: 117 KDGEKVKPGDILVILDSEASTAELKSLEKVKASLEQENRFYRTLMNQSLDPSDVERAIIK 176

Query: 133 -----------------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                              E QL        ++ + +    ++ +  S     +R  S  
Sbjct: 177 LDLPTEVAALARNRAALMAENQLYQVELGNQASGTSLTPEQLARLQASQAESSSRALSAQ 236

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMK-------------------------------- 203
           L    LE +    +  L+  +K L   +                                
Sbjct: 237 LEMDQLEKQLRQTQVELADAKKQLLDDRKVLNEIQQRNEQAIKEANKALEIEEAILQDIG 296

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIH-------------------------EQK 238
            L E+  V++  + +Q + + +   +L E                            E+K
Sbjct: 297 PLAEEGGVARLQVERQRQTIAERRQQLTEQRANGTIEYDRQKQQVQDRLKEIERFTEEEK 356

Query: 239 NMLRHINELYDEA------------------NLEFANYLKEISRDLEQNQRTFADEMSKL 280
            +   IN+                           A+   ++++ + +N +  A+  S++
Sbjct: 357 RLKIAINQAQARLVNTVKLTEKDLRDKIADNKERIADIDSQLNKTIIENDKRIAELGSQI 416

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVPHSKLTYIRAKVTPK 337
           +    T + + I +P+ GT+      +   Y      ++PL++IVP          +T +
Sbjct: 417 SRTNVTLKYQEIKAPVGGTVFDL--NAGPGYVPPPNQTEPLLRIVP-DDNLIAEVNITNQ 473

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I  V+ G    VR   +        K  +  I     + D   Q   +    +++    
Sbjct: 474 DIGFVRVGQQVDVRIDSFPFSEFGDIKGEVISIGSDALEPDEIHQYYRF-PAKVELDQQY 532

Query: 398 F--SDNNIELRNGFPAEVLFTAKN-TTLAQ 424
              +D  I L++G         +   T+  
Sbjct: 533 LTTADREIPLQSGMSVTANIKVRENRTVLS 562


>gi|88808817|ref|ZP_01124327.1| putative type I secretion protein [Synechococcus sp. WH 7805]
 gi|88787805|gb|EAR18962.1| putative type I secretion protein [Synechococcus sp. WH 7805]
          Length = 339

 Score =  168 bits (426), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 46/363 (12%), Positives = 115/363 (31%), Gaps = 30/363 (8%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  LL           D     + NL       +SA+                     
Sbjct: 2   RKGEVLLELNPQLVGSAYDAAIQELDNLVLQQIQLRSAIKG------------------- 42

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              L    ++  KV       +   L+ K  ++ +   +  + + + + L   +   +++
Sbjct: 43  QKILDGSSNSNDKVTLSQQKLLTSRLENKSDQIDAAKASVAEKKAEVAGLSEQIMFQRQE 102

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           + M  +L +  A S+  +         +  +L E I  +    + + +         +  
Sbjct: 103 IRMWDSLTDSGAASKLQM-------VTAQGKLAEMIGARNEAQKALKQAEANLRGLESGM 155

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           + E +  + +     A     +  ++   E+  I+SP+ G +   +  +  +       +
Sbjct: 156 IFENNSKIAELVGEEAVISKNINKIKNQLERTKIISPVDGVVSDLRYKAPGSVVGPGAVV 215

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +++VP+     +  +V  K I  V  G    +    +           I  I     Q  
Sbjct: 216 LQVVPNQGSKIVELRVPSKDIGFVSIGQKVDINLLPFDSSIYGTMPGKITSIAGTTVQD- 274

Query: 379 NNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
             +  + YY     +       +D  + +++G P       +  ++ + ++ P T     
Sbjct: 275 -PVTGKYYYLARASLNHQYLDINDKKLTIQSGMPLIGDIKGQQRSVLRYLLQPFTRTVGS 333

Query: 437 IFE 439
            F 
Sbjct: 334 AFR 336


>gi|126659215|ref|ZP_01730353.1| HlyD family of secretion proteins [Cyanothece sp. CCY0110]
 gi|126619520|gb|EAZ90251.1| HlyD family of secretion proteins [Cyanothece sp. CCY0110]
          Length = 578

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 74/509 (14%), Positives = 166/509 (32%), Gaps = 103/509 (20%)

Query: 16  SLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSP--FSGIIKKFQV 72
           S  R  + +IIG+    I W+ +  IE  V + G++  ++ V E+ +P     +++K  +
Sbjct: 56  SWSRGVVWTIIGVTTASIVWAGIAKIEQVVPAQGQLKPQEAVKEVHAPPVGGAVVEKVLI 115

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF- 131
           E+G ++ QG  L+  +   +T  +   +    +L       ++ ++   N  DV      
Sbjct: 116 EDGQKVKQGDILVILDSEASTAELKSLEKVKASLEQENRFYRTLMNASLNPSDVERAIIK 175

Query: 132 -----------------------------------ESREEQLLDFLGKYHSTCSKVFNYG 156
                                                  EQL         + S+     
Sbjct: 176 LDLPTEVAALARNRAALIAENRLYQAELGNQSPGTALSPEQLARLRASQAESSSRALAAQ 235

Query: 157 IS--SVYRSLKMKLTRMRSIYLNRLD-----------LENKSSLLRALLSSHQKDLTMMK 203
           +    + + L+     +       +D            E   +     L   +  L  + 
Sbjct: 236 LEMDQLEKQLRQTQVELADAKQQLIDDRKVLNEIEQRNEKAIAEAEKALEIEEAILEDIG 295

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIH----EQKNMLRHINELYDEAN------- 252
            L E+  V++  + +Q + + +   +L E       E     + + +   E         
Sbjct: 296 PLAEEGGVARLQVERQRQTIAERRQQLTEQRSNGTIEYDRQKQQVQDRLKEIERFTEEEK 355

Query: 253 --------------------------------LEFANYLKEISRDLEQNQRTFADEMSKL 280
                                              A+   ++++ + +N +  A+  S++
Sbjct: 356 RLKIAMNQAQAQLVNTVKLTEKDLRDKVSDNNERIADIDSQLNKSIVENDKQIAELGSQI 415

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVPHSKLTYIRAKVTPK 337
           +    T + + I +P++GT+   +  +   Y      ++PL++IVP          +T +
Sbjct: 416 SRTNVTLKYQEIKAPVSGTVFDLK--AGPGYVPPPNQTEPLLRIVP-DDNLIAEVNITNQ 472

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDL 396
            I  V+ G    VR   +        K  +  I     + D   Q   +  +V L   +L
Sbjct: 473 DIGFVRVGQKVDVRIDSFPFSEFGDIKGEVMSIGSDALEPDEIHQFYRFPAKVELDQQEL 532

Query: 397 AFSDNNIELRNGFPAEVLFTAKN-TTLAQ 424
             ++ +I L++G         +   T+  
Sbjct: 533 QTAERDIPLQSGMSVTANIKVRENRTVLS 561


>gi|330861343|emb|CBX71581.1| leukotoxin secretion protein D [Yersinia enterocolitica W22703]
          Length = 289

 Score =  167 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 90/286 (31%), Gaps = 1/286 (0%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           T   +       V   L  + +                +  +AL+ +  + L  ++ L +
Sbjct: 2   TAKSLLTKEYDEVNAELARQDSERAVNQAYIQAGNANITHHKALMKNIHQRLQALQTLVK 61

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             A+++ ++  QER    ++ E      EQ  +   +  L        A   +     L 
Sbjct: 62  SKAIAEAEVLIQEREWLNASAEGNRLESEQAVLRAKMRNLAQVRLHYLAEKKRSYQEQLN 121

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           +          +L  L + + Q+++ +P+ G I  +   +       +QPLM +VP S  
Sbjct: 122 KAHEVINQLKQELVKLMEKQRQQSLRAPVDGVIQQSTVHTLGGVVTSAQPLMVLVPESHQ 181

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +   +  K I  V  G +  V+   +   R       ++ I     +           
Sbjct: 182 LELDVMILNKDIGFVLPGQSVEVKVDSFPYTRFGTLSGEVKHISRDAMEDQQQGLVFP-A 240

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
            + L    L      + L  G             +   ++ P+   
Sbjct: 241 RIRLNSDTLIVEGKPVRLSAGMAVSAEIKTGRRRVIDYLLSPLQQY 286


>gi|148240803|ref|YP_001226190.1| hypothetical protein SynWH7803_2467 [Synechococcus sp. WH 7803]
 gi|147849342|emb|CAK24893.1| Conserved hypothetical protein [Synechococcus sp. WH 7803]
          Length = 415

 Score =  167 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 69/420 (16%), Positives = 153/420 (36%), Gaps = 69/420 (16%)

Query: 15  ASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
               +    ++IG   L I W  +   E  V ++G++    NV +++ P  G++++  V+
Sbjct: 45  RFWMKTVTWTLIGTTALGIGWLAVARTEEVVVATGKLEPVGNVKDVRIPPGGVVEEILVK 104

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +G ++ +G  L+  +                                           ES
Sbjct: 105 SGQRVSKGQALIRLDQ------------------------------------------ES 122

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             EQL           +++         +    KL R+R+  LNR     + +  +A L+
Sbjct: 123 TAEQLKSLTQGLEEKTTQIGQKEQQLQLK----KLERVRTEELNR----EQIATTQANLA 174

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q+ L+ +++L ++  +      QQ   V +   EL +   + +  +  I++  ++ N 
Sbjct: 175 LEQEILSRLESLAKEGGIQDIQYLQQRNKVQELKGELTKRKLDGRRQINQIDQQVEQLNA 234

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E A    E            A   + LT +  T + +T+ +P+ G +   +  +    +Q
Sbjct: 235 ELAGLRSE-----------RAQLNANLTDVRVTNKNQTLRAPVDGIVFDLKLNNPGFVSQ 283

Query: 314 Q--SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S+  +K+VP +       ++   +I  V+ G  A +    +           ++ + 
Sbjct: 284 AMSSEVALKVVPFN-TLEADVEIPSNKIGFVRPGQPADISIDSFPATDFGVLAGTVQSVG 342

Query: 372 PIISQQDNNLQTQEY-YEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEII 427
                 D     QEY Y  ++K+       N+   + L+ G         ++ +  Q ++
Sbjct: 343 SDALAPDPQQMRQEYTYPAVIKLDSQQLKLNDGKELPLQVGMSLTANIKLRSVSYLQLLL 402


>gi|226328845|ref|ZP_03804363.1| hypothetical protein PROPEN_02746 [Proteus penneri ATCC 35198]
 gi|225202031|gb|EEG84385.1| hypothetical protein PROPEN_02746 [Proteus penneri ATCC 35198]
          Length = 288

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 103/262 (39%), Gaps = 5/262 (1%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
             RL +  + +    L    +  L   KNL +K A+S++ + +QE    ++  ELR    
Sbjct: 24  AERLTILARINRYEKLSQIEKSRLDDFKNLLQKQAISKHAVLEQENKYLEAANELRIYKT 83

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           + + +   I    +E  L    +  EI   + Q   +      +L   E+ ++   I +P
Sbjct: 84  QLEQIESEILLAKEEYQLVTQLFKNEILDKIRQTTDSVKLLALELEKNEQRQQASVITAP 143

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           ++G +   +  +       ++ LM IVP +    + A +  K I  +  G    ++   +
Sbjct: 144 VSGKVQQLKVHTEGGVVTTAETLMIIVPENDTLEVTALIQNKDIGFIDVGQDVIIKVEAF 203

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEV 413
              R       ++ I+    +   N Q    + VI+ I +  L+  + NI L +G     
Sbjct: 204 PYTRYGYLVGKVKNINLDAIE---NQQLGLVFNVIISIEENNLSIGNKNIPLSSGMAVNA 260

Query: 414 LFTAKNTTLAQEIIHPITDNWP 435
                  ++   ++ P+ ++  
Sbjct: 261 EIKTGMRSVISYLLSPLEESVK 282


>gi|78183702|ref|YP_376136.1| hemolysin secretion protein-like [Synechococcus sp. CC9902]
 gi|78167996|gb|ABB25093.1| hemolysin secretion protein-like [Synechococcus sp. CC9902]
          Length = 417

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 58/420 (13%), Positives = 142/420 (33%), Gaps = 42/420 (10%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
                LS   +   + ++    I+ +VS  G++    +V +I+SP SG++      +G  
Sbjct: 32  SAFIWLSAGLLGVTVIFAFSSKIDQTVSVRGKLSPSGSVQDIESPSSGVVLDVFASDGDF 91

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  LLT E    +  +      I+ L   I   K  ++        L K        
Sbjct: 92  VEAGDILLTVESKSLSSRLSEINEKIQLLSLEISGLKDIIESGGKPS--LFKPLPPLPTG 149

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           + D                 + +   +     ++  I    + ++ +     + L+   +
Sbjct: 150 IDD-----------------AQLVSRMLTARNQVNQIRSELIKVDIRLQSKSSSLNYQTQ 192

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
               +K L++  A+++N    Q   + ++  E    + E+  ++  ++   +  N +   
Sbjct: 193 ITNDLKPLYDNGAMARNAYLDQINRLQENKAEFSTLVTERSRIVGSVSSRVNSLNQQ--- 249

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                               ++LT + +    + + +P++G +    + S  +    S+ 
Sbjct: 250 ---------------LLSLRTQLTSVNEQIGYRNVKAPVSGRVFNLMA-SPYSVVSSSEK 293

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L+ IVP +       ++    I  +K G   +V    +        +  +  I       
Sbjct: 294 LLTIVPSNN-LQALVEIPNSDIGFIKVGQAVSVSVDSFPSGEFGYIRGSLISIGSDALPP 352

Query: 378 DNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
           D +   Q Y+   +K+   +    D ++ L++G         ++      +    T    
Sbjct: 353 DQD-SPQRYFPGTVKLVQQSVVSGDTSLNLQSGMSITANIKLRSRPTISILTDIFTRQLD 411


>gi|16330856|ref|NP_441584.1| HlyD family secretion protein [Synechocystis sp. PCC 6803]
 gi|1653350|dbj|BAA18264.1| HlyD family of secretion proteins [Synechocystis sp. PCC 6803]
          Length = 583

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 78/515 (15%), Positives = 164/515 (31%), Gaps = 102/515 (19%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + R  P   + + +  +   +  +TW+ +  IE  V ++G++   D V +I +P +G++K
Sbjct: 55  VMRQSPMWARGIAIAIMGVTVVAVTWASIATIEQVVPATGQLKPLDTVKDINAPLNGVVK 114

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKK---------------------------- 100
           +  VEN  ++ +G  L+  +   T   +   +                            
Sbjct: 115 EVLVENNRKVKKGEVLVIMDSSSTRAELTAAQNIRSKVLQENAFYRTLLQNGLEGSTLQR 174

Query: 101 -----------VSIKNLRCHIDTE----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                      V++ N R  +  E    +  L   N   +    A +    ++  F    
Sbjct: 175 AISQLNLPWEVVALANNRAELINENKLYRQQLGLRNASGEGQLSAEQLSRLEMARFELGS 234

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL--------ENKSSLLRALLSSHQK 197
             T +++    I    +   ++L   RS       +        E         L+    
Sbjct: 235 RVTAAELEIRQIEKQLQQASLQLRAERSQLQEDQKILAGLLGRNEAALVEAEKSLAIEAG 294

Query: 198 DLTMMKNLFEKNAVSQ-------------------------NDLNQQERIVYKSTLELRE 232
            +  M  L E+ A+++                          ++++Q++ +     E++ 
Sbjct: 295 IVNSMTPLLEEGALARLQVEKQQQSLNDRTQQLIEQKVNTVVEVDRQKQQIESRQAEIQR 354

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI---------- 282
              EQ  +   I++         A   K+I   L  N +  A+  S++T           
Sbjct: 355 LETEQSRLQSLISQAQARLANTSAVTDKDIYDRLADNNKRLAEIDSQITKIIVDNDKRLT 414

Query: 283 --------LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKLTYIRA 332
                    +     + I SP+ G +   ++ +         ++PL+KI+P         
Sbjct: 415 ELNGQIERAKVNLGYQEITSPVDGVVFDLKA-TPGYVTPPNQTEPLLKIIPADS-LVAEV 472

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            VT K I  V+ G    VR   +           +E +       D   Q   +  V +K
Sbjct: 473 DVTNKDIGFVRTGMPVDVRIDSFPYSEFGGVDGEVEYVGSDALPPDQTYQFYRF-PVRIK 531

Query: 393 ITDLAF--SDNNIELRNGFPAEVLFTAKN-TTLAQ 424
           +           I L++G         +   T+  
Sbjct: 532 LDSQELVSHGREIPLQSGMSVTANIRVREKRTVMS 566


>gi|119512898|ref|ZP_01631962.1| hypothetical protein N9414_07104 [Nodularia spumigena CCY9414]
 gi|119462436|gb|EAW43409.1| hypothetical protein N9414_07104 [Nodularia spumigena CCY9414]
          Length = 505

 Score =  166 bits (421), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 67/467 (14%), Positives = 154/467 (32%), Gaps = 54/467 (11%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P   K   + + + +I  +  + L  +    I+V     I  E  +  ++S   G ++K 
Sbjct: 33  PRISKWTNIGAGVLLITFMAAAGLTSVFNYNITVKVPASIRPEGELGIVQSAVMGTVQKI 92

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD----V 126
            V+    + QG P+   +D    +     + SI+  +  +    + +  +  +      +
Sbjct: 93  DVQENQVVKQGEPIAYIDDSRLQNQKSQLENSIEQSQLQLRQIDAQIAEIATQIAAQTTL 152

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L +   + + +L      Y             +       K+ R R    N L    + +
Sbjct: 153 LNRTIIAAQAELSASQRNYEDQQKTTMADLTEAEATWNLAKIQRDRLQQNNLLTATVQEA 212

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L   L+  Q+D   ++++    A+S+N L ++++ V  +  +L +     K+++    +
Sbjct: 213 ELALNLAKKQRDR--LQSVVASGAISRNLLEEKQQEVKSAQAKLEQAKANAKDLMSEKEQ 270

Query: 247 LYDEANLEFANYLKEIS-----------------------------------RDLEQNQR 271
               A ++       I+                                   +   + ++
Sbjct: 271 ALKIAQIKLEKAQNSINPHNAAITIASERIKQEQASGKSTLSALNRERETLFQQRLELEK 330

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                  +L  +E    Q  I +PIAGT++     +     Q SQ + +I P +    I+
Sbjct: 331 QTMRTRKELQQVETDLNQTVIRAPIAGTLLQLNLRNPGQVVQPSQAIAQIAPVNAPIVIK 390

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ----------QDNNL 381
           A V P+ I  V+ G    ++               +  + P              Q    
Sbjct: 391 AFVPPQDIDKVEPGQKVQMQVSACPYPNYGTLHGTVRNVAPDALPMGNNSMEPGLQGATQ 450

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                  +  + T +   ++   L+ G        ++  T+   I+ 
Sbjct: 451 TVGYETTIEAETTYVGRENHQCHLKPGMKGRADIISRQETVLNFILR 497


>gi|194290268|ref|YP_002006175.1| type I secretion protein, hlyd type [Cupriavidus taiwanensis LMG
           19424]
 gi|193224103|emb|CAQ70112.1| putative Type I Secretion protein, HlyD type [Cupriavidus
           taiwanensis LMG 19424]
          Length = 460

 Score =  165 bits (419), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/447 (15%), Positives = 154/447 (34%), Gaps = 25/447 (5%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      L    P+ L  +T+++    ++  + WS +   ++ V++ G +  E  V    
Sbjct: 20  HGAEGIGLLSAEPSRLGMLTIVTTFALVLCGLVWSFVGHADVIVTAQGTLAPESEVRRFY 79

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G +    V  G  + +   L               + +   L   +  E S  ++ 
Sbjct: 80  APVDGELADLYVAEGQPVSKDDVLARLNARGA------IEAAANALEAQLKLEDSEREWK 133

Query: 121 NNKY--DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                  ++E+   + ++Q+     ++ +  ++            L+   + + +    R
Sbjct: 134 QFPDKKALMERRAAALKQQIDVATRQHETRIAEGTTRLAEQQRAQLQEARSNLENARRAR 193

Query: 179 LDLENKSSLLRALLSS------HQKDLTMMKNLFEKN----AVSQNDLNQQERIVYKSTL 228
                +      LL+        Q  +   +   +       V+Q+ L + E  + +   
Sbjct: 194 EFARQEQDRYARLLALPGGGGVSQSQVDAKRAAAQDAENTLRVAQSRLTELEARLGRELT 253

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +    +      L  +   YD A  E AN   ++   + Q  R  AD  +++      ++
Sbjct: 254 QASSELESSGQDLAGLRVQYDAALREIANTEDKLRLQV-QTARLVADAAARIRFENIDKD 312

Query: 289 Q-KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               IL+P++G I    S    +  Q + PL  I P      ++  +  +    +++G  
Sbjct: 313 NFLLILAPVSGVITDVTSTQRGDKVQANTPLGGIAPKDARPVVKIVIAERDRAFLREGLP 372

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIEL 405
             ++F  +   R       +E I P  + +      Q  YE  +++       +DN   L
Sbjct: 373 VKLKFNAFPYQRYGIIDGTLEFISP--ATKPGGPDKQPVYEGRVRLARDYYTVADNKYPL 430

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITD 432
           R G  A      +   L    + P  +
Sbjct: 431 RYGMTATAEIVVRERRLIDLGLDPFRE 457


>gi|149915798|ref|ZP_01904323.1| Type I secretion membrane fusion protein, HlyD [Roseobacter sp.
           AzwK-3b]
 gi|149810380|gb|EDM70225.1| Type I secretion membrane fusion protein, HlyD [Roseobacter sp.
           AzwK-3b]
          Length = 308

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 104/313 (33%), Gaps = 23/313 (7%)

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
            + YD L       E Q+L    + +   S           R+ +  LT           
Sbjct: 7   RSAYDELLGREALLEMQILRLQAEANPEQSGALAIPERLAERAPQAALTEQSLFIARMDQ 66

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                 +L  +  S   +L +++ L E+ A+ + DL + ++ V     E+ E+    +  
Sbjct: 67  YRETLGVLSRIKESRDAELLLLEPLVERGAIPETDLIRVQQSVLMVAQEITEHRTGVEAA 126

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                                    L + Q   A    +L +     E+  + +P+ G +
Sbjct: 127 RMQA---------------------LSEQQAELAQIRQQLRVRAAQVERAELRAPMDGIV 165

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 ++        P+++I+P      +  ++ P+ I  V  G  A+V+   +     
Sbjct: 166 NRVVVRTAGGVIAPGGPILEIIPLDDALVVAGRIKPQDIGPVFVGMGASVKLTAFDYRDY 225

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                 +  +             + YYE+++++     +     + +R G  A V   A 
Sbjct: 226 GSLAGAVVHLSADTVTDPETNDPEPYYEIVVELDSQTLTGPKGEVFIRPGMLATVELDAG 285

Query: 419 NTTLAQEIIHPIT 431
             T+   + +PI 
Sbjct: 286 QNTVFHYLFNPIL 298


>gi|113868644|ref|YP_727133.1| putative drug or toxin secretion protein [Ralstonia eutropha H16]
 gi|113527420|emb|CAJ93765.1| putative drug or toxin secretion protein [Ralstonia eutropha H16]
          Length = 460

 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/447 (15%), Positives = 156/447 (34%), Gaps = 25/447 (5%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSII-GIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      L    P+ L  +T+++    ++  + WS +   ++ V++ G +  E  V    
Sbjct: 20  HSAEGIGLLSAEPSRLGLLTIVTTFTLVLCGLVWSFVGHADVIVTAQGTLAPESEVRRFY 79

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G +    V  G  + +   L               + +   L   +  E S  ++ 
Sbjct: 80  APVDGELADLYVAEGQPVSKDDVLARLNARGA------IEAAANALEAQLKLEDSEREWK 133

Query: 121 NNKY--DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                  ++E+   + ++Q+     ++ +  ++            L+   + + +    R
Sbjct: 134 QFPDKKALMERRAAALKQQIDVATRQHETRIAEGTTRLAEQQRAQLQEARSNLENARRAR 193

Query: 179 LDLENKSSLLRALLSS------HQKDLTMMKNLFEKN----AVSQNDLNQQERIVYKSTL 228
                +      LL+        Q  +   +   +       V+Q+ L + +  + +   
Sbjct: 194 EFARQEQDRYARLLALPGGGGVSQSQVDAKRAAAQDAENNLRVAQSRLTELDARLGRELT 253

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +    +      L  +   YD A  E AN   ++   + Q  R  AD  +++      ++
Sbjct: 254 QASSQLESSGQDLAGLRVQYDAALREIANTEDKLRLQV-QTARLVADAAARIRFENIDKD 312

Query: 289 Q-KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               IL+P++G I    S    +  Q + PL  I P      ++  +  +    +++G  
Sbjct: 313 NFLLILAPVSGVITDVTSTQRGDKVQANTPLGGIAPKDARPVVKIVIAERDRAFLREGLP 372

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIEL 405
             ++F  +   R    +  +E I P  + +      Q  YE  +++     A +DN   L
Sbjct: 373 VKLKFSAFPYQRYGIIEGTLEFISP--ATKPGGPDKQPVYEGRVRLARDYYAVADNKYPL 430

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITD 432
           R G  A      +   L    + P  +
Sbjct: 431 RYGMTATAEIVVRERRLIDLGLDPFRE 457


>gi|298485503|ref|ZP_07003586.1| HlyD family secretion protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298159967|gb|EFI01005.1| HlyD family secretion protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 320

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 95/293 (32%), Gaps = 1/293 (0%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +LD    +     +           SL +    ++    +      +   L+  L    K
Sbjct: 18  ILDADPMHVLAAERWLQGQYQEYRSSLDLVDAEIQQRQADIQAARIQVMSLQKTLPIATK 77

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             +  +NL +K  ++++   ++E+       +L               E         A 
Sbjct: 78  LASDYENLLKKQYIARHAYLEKEQARLDLERQLSVQQASVLQSTAARQEAERRREGVVAQ 137

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
             + +   L+Q  +  A     LT      +  T+ +P+ GT+      +       +QP
Sbjct: 138 TRRAMLDLLQQADQKIASFNQDLTKARYQEDLTTLEAPVDGTVQQLAVHTVGGVVTPAQP 197

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM +VP  +   + A +  K +  V+ G   TV+   +   +    +  +  +     + 
Sbjct: 198 LMVLVPDGQPVEVEAMLENKDVGFVRAGQPVTVKVETFTFTKYGTIEGEVISVSNDAIED 257

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           +         ++ L    L  +  +I+L  G             + +  + P+
Sbjct: 258 EKRGLIYSS-KIRLNSDTLNVNGVDIKLSPGMAVTAEVKTNKRRVIEYFLSPL 309


>gi|295700335|ref|YP_003608228.1| secretion protein HlyD [Burkholderia sp. CCGE1002]
 gi|295439548|gb|ADG18717.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1002]
          Length = 457

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/446 (14%), Positives = 143/446 (32%), Gaps = 23/446 (5%)

Query: 2   HHFMWKNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      +  + P  + R +    +  ++  + WS +   ++ VS+ G +  E  V  I 
Sbjct: 17  HSVEGIAILTSEPVRIARALIWAMVALVVSGLLWSFVGRADVIVSAPGTLSPESEVRRIY 76

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G +    +  G  + +G  L               + +   L+  +  E +  ++ 
Sbjct: 77  APIDGELADLYIAEGQPVSKGDVLARLNARGA------IEAASNALQAQLKLEDAEREWK 130

Query: 121 NNKY--DVLEKAFESREEQLLDFL----GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
                  ++E+   S + QL         +     +K+     + +  +        R+ 
Sbjct: 131 QFPEKKALMERKAASLKAQLEVEERLHENRVSEGTTKLAEGQKAELDEARSSLDNARRAR 190

Query: 175 YLNRLDLENKSSLLRA----LLSSHQKDLTMMKNLFEKNA--VSQNDLNQQERIVYKSTL 228
                +L+  S L        ++  Q +      L   NA  V+Q+ L + +  +     
Sbjct: 191 EAANQELDRYSRLFAQPGGGGIAELQVEQKRTAALEADNAYRVAQSKLAELDFRLSHEYA 250

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +    +         +   YD+A  +  +   ++   L+  +                  
Sbjct: 251 QANAQLATSGQQSTDLQLQYDQAVRDVTDAEDKLRVQLQSARLEADAAARVRFENIDKDN 310

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              IL+P++G I    S    +  Q + PL  I P      ++ +++      +  G   
Sbjct: 311 FLLILAPVSGVITDVTSTQRGDKIQANAPLGGIAPKDARPVLKIEISEHDRAFLHVGLPV 370

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIELR 406
            ++F  +   R       +  I P  + + +    Q  YE  + +       +     LR
Sbjct: 371 KLKFNAFPYQRYGLISGTLAYISP--ATKPSAQDKQPVYEGRVTLDKDYYQVAGTRYPLR 428

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITD 432
            G  A      +   L    + P  +
Sbjct: 429 YGMTASAEIVVRERRLIDLGLDPFRE 454


>gi|186472671|ref|YP_001860013.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
 gi|184195003|gb|ACC72967.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
          Length = 457

 Score =  163 bits (413), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 71/449 (15%), Positives = 158/449 (35%), Gaps = 29/449 (6%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      +    P  + +  +L+++G ++  + WS     ++ V++ G +  E +V  I 
Sbjct: 17  HSAEGVAILTAEPVRIAQALVLAMVGLVVAGLLWSFFGRADVIVTAQGTLAPESDVRRIY 76

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G +    +  G  + +G  L               + +   L+  +  E +  ++ 
Sbjct: 77  APIDGELTDLYIAEGQPVSKGDVLARINARGA------IEAATNALQAQLKLEDAEREWK 130

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL- 179
                  ++  E +   L D L           + G + +    K +L   RS   N   
Sbjct: 131 EFPQK--KELMERKAAALKDQLEVEERLHENRISEGTTKLAEGQKAQLEEARSTLDNARR 188

Query: 180 ------DLENKSSLLRAL-----LSSHQKDLTMMKNLFEKNA--VSQNDLNQQERIVYKS 226
                    +K + L A      ++  Q +      +  +NA  V+Q+ L + +  +   
Sbjct: 189 ARDAARQEADKYARLFAQPGGGGVAELQVEAKRNTYMEAENAYRVAQSRLTELDFKLSHE 248

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             E    +         +   YD+   E  +  +++   L Q  R  A+  +++      
Sbjct: 249 YAEANAQLETSGQQATTLQLQYDDLIREITSTEEKLRLQL-QTARLVAEAAARIRFENID 307

Query: 287 REQ-KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           ++    IL+P +G +    S  + +  Q + PL  I P      ++ ++  +    + +G
Sbjct: 308 KDNFLLILAPTSGVVTDVTSTQTGDKIQANAPLGGIAPKDARPVLKIEIAERDRAFLHEG 367

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNI 403
            T  ++F  +   R       +  I P  + + +    Q  YE  +++       ++N  
Sbjct: 368 MTVKLKFNAFPYQRYGLINGTLAYISP--ATKPSAQDKQPVYEGRVQLDRNYYQIAENRY 425

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            LR G  A      +   L    + P   
Sbjct: 426 PLRYGMTASAEIVVRERRLIDLGLDPFRQ 454


>gi|126174394|ref|YP_001050543.1| secretion protein HlyD family protein [Shewanella baltica OS155]
 gi|125997599|gb|ABN61674.1| secretion protein HlyD family protein [Shewanella baltica OS155]
          Length = 413

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 146/414 (35%), Gaps = 50/414 (12%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
            +I  +  + +S     E      G ++  + +  + S  +G++    V+ G  + +G  
Sbjct: 39  IVIFTLFFLFYSDYSKKEKV---KGYLVLTNGLARVYSHTNGVVSDISVKEGDVVTKGDT 95

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           LL+  + +                      ++ L   N K   ++K     E QLL +  
Sbjct: 96  LLSVSNDKY--------------------LRNTLSSDNEKIKEIDKQIVLVEGQLLQYNS 135

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +H   S++                + +R +   + +L  +  L+R  +   ++ L  +K
Sbjct: 136 LFHERESRL---------------NSIIRFLEQEQSELVLQGKLIRNRVDLAKERLADIK 180

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L   +  SQ+++  Q        L+ ++ I E   ++         A  + A    E  
Sbjct: 181 TLHANDYASQSEVKTQ----LDLVLDFQQRIQEYNTVVLKSETNLANALNDKAKLPFERQ 236

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           + ++Q     +   +   +  +      + +PI+G +   + F+   +A   + L+ I+P
Sbjct: 237 QQIDQLNIELSKLHNN-KVAIQENSNLVLKAPISGVVSSIK-FNIGEFAPSGEYLVTIIP 294

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-PIISQQDNNLQ 382
                     +  + I  VKKG    ++   +   +       +  +   II   +   +
Sbjct: 295 TDSKLEAEVFIPTRAIAFVKKGDEVNLKLDAFPFQKFGSVHGRVSHVSMNIIFSAETASK 354

Query: 383 ---TQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
              ++  Y V + +T        N   L  G   +      + TL + ++ P+ 
Sbjct: 355 LSFSEPVYRVKVDLTKQYIKAYGNETSLIPGMLLQADINTGSRTLVEWLLEPLF 408


>gi|254489497|ref|ZP_05102700.1| HlyD family secretion protein [Roseobacter sp. GAI101]
 gi|214042004|gb|EEB82644.1| HlyD family secretion protein [Roseobacter sp. GAI101]
          Length = 179

 Score =  162 bits (411), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 59/178 (33%), Gaps = 4/178 (2%)

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            DL        +    +   +   E+  I +P  G +   Q  +          L+ IVP
Sbjct: 3   TDLRDVTLEIEELALSIVTRQAQLERTDIRAPSDGVVHELQVTTLGGVIAPGGTLLDIVP 62

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            +       +V P+ I  V+    A V F  +      K    +  I P           
Sbjct: 63  QNAGYEFEVRVPPQSIDRVRPNQRAQVVFSAFDQQTTPKLVGHVRAISPEAVDD--RQSG 120

Query: 384 QEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           Q +Y V L++   +L+       L  G P E     +  T+   +  PIT +  + F 
Sbjct: 121 QSFYRVSLEVPQKELSRLPETAHLLPGMPVEAFLETQERTVLSYLTEPITTHLRRGFR 178


>gi|88809459|ref|ZP_01124967.1| possible transporter component [Synechococcus sp. WH 7805]
 gi|88786678|gb|EAR17837.1| possible transporter component [Synechococcus sp. WH 7805]
          Length = 419

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 77/428 (17%), Positives = 149/428 (34%), Gaps = 68/428 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + + R     +K +T   I   +  I W  +   E  V ++G++    NV +++ P  GI
Sbjct: 42  EPVLRQSRFWMKSVTWTLIGTTVLGIGWLAIARTEEVVIATGKLEPVGNVKDVRIPPGGI 101

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  V+ G ++ +G  L+  +                                      
Sbjct: 102 VEEILVKGGQRVTKGQALIRLDQ------------------------------------- 124

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                ES  EQL           S++    I    +     L R R++ LNR  L    S
Sbjct: 125 -----ESTAEQLKSLTKGVEEKASQI----IQKEQQFQLKLLERERTLDLNREGL----S 171

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             RA L   ++ L  ++ L +  A       QQ   V +   E+ +   + +  +  I++
Sbjct: 172 TTRANLQLEKQILDRLEGLAKIGATPDIQYLQQRNRVEEIKGEVTKLELDGRRQINLIDQ 231

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++ N E A    E            A   + LT +  T + +T+ SP  G +   +  
Sbjct: 232 QIEQLNAELAGLRSE-----------RAQLNANLTDVRVTNKNQTLRSPADGIVFDLKLN 280

Query: 307 SSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +      A  S+  MKIVP +       ++   +I  V+ G +A +    +         
Sbjct: 281 NPGYVSMAMSSEVAMKIVPFN-TLEADVEIPSSKIGFVRPGQSADISIDSFPATDFGVLS 339

Query: 365 AIIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNT 420
             ++ +       D     QEY Y   +K+       N+   + L+ G         ++ 
Sbjct: 340 GTVKSVGSDALAPDPQQMRQEYTYPASIKLDSQQLKLNDGKELPLQVGMSLTANIKLRSV 399

Query: 421 TLAQEIIH 428
           +  Q ++ 
Sbjct: 400 SYLQLLLQ 407


>gi|218458792|ref|ZP_03498883.1| HlyD family secretion protein [Rhizobium etli Kim 5]
          Length = 218

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 78/220 (35%), Gaps = 2/220 (0%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             ++ +       +    +++  + +L  + AVS   LN  +        +  E I  Q 
Sbjct: 1   EGVKAQEIAYSEGIEVLDREIASLTSLRMQGAVSDQRLNSLKTQRATFGGDRGEQIAAQA 60

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                I E   +      +   E+ R+L   Q    + + +    E   ++  I++P +G
Sbjct: 61  QAAGRITETNLQILQVDQDLKAEVGRELRDTQAQIGEYVERKIAAEDELKRTDIVAPQSG 120

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   Q+ +       + P+M IVP +    +  ++ PK I  ++ G  A +R   +   
Sbjct: 121 IVHSLQAHTIGGVLTPADPIMLIVPENDSLALEVRLAPKDIDQLQIGQRAVLRMSAFNQR 180

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
              +    +  I   ++          YY V + +     
Sbjct: 181 TTPELNGHVSLIAADLTTDQR--SGLSYYLVRIAVPPEEL 218


>gi|116074355|ref|ZP_01471617.1| possible transporter component [Synechococcus sp. RS9916]
 gi|116069660|gb|EAU75412.1| possible transporter component [Synechococcus sp. RS9916]
          Length = 408

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/420 (15%), Positives = 145/420 (34%), Gaps = 69/420 (16%)

Query: 15  ASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
               +    ++IG     I W  +   E  V + G++    +V EI+ P  G++++  V+
Sbjct: 38  RFWLKSVTWTLIGTTVFGIGWLGIARTEEVVVAMGKLEPVGDVKEIRIPTGGVVEEILVK 97

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +G ++ +G  L+  +                                           ES
Sbjct: 98  SGDRVKKGQLLIRLDQ------------------------------------------ES 115

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             EQL+          S++         +    +L R R++ LNR  L    +  R+ L+
Sbjct: 116 TAEQLVSLEKSVTEKSSQIAQKQ----EQLKLKRLERQRTLDLNREQL----ATTRSNLA 167

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             ++ L  +  L  + A       QQ   V +   ++ +   + +  +  I++  ++ N 
Sbjct: 168 LERQILDRLAGLAREGASPDIQYLQQRNRVAELKGQITKEELDGRRQIALIDQQVEQLNA 227

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA- 312
           E A    E            +   ++ T ++ T   + + SP+ G +   +  +    + 
Sbjct: 228 ELAGLRSE-----------RSQLEARRTEVKVTNRNQLLRSPVDGIVFDLKLTNPGFVSQ 276

Query: 313 -QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q +Q  +K+VP +       ++   +I  V  G +A V    +        +  +  + 
Sbjct: 277 DQSAQAALKVVPFN-TLEADVEIPSSKIGFVHTGQSAEVSIDSFPATDFGVLEGTVSSVG 335

Query: 372 PIISQQDNNLQTQEY-YEVILKITDLAFSDNNIELRN---GFPAEVLFTAKNTTLAQEII 427
                 D     +EY Y   +K+ D     NN  +     G         ++ +  Q ++
Sbjct: 336 SDALAPDAQKGREEYRYPATIKLNDQELKVNNGTVLPLQVGMSLTANIKLRSVSYLQLLL 395


>gi|304414513|ref|ZP_07395708.1| putative ABC associated RTX toxin transporter [Candidatus Regiella
           insecticola LSR1]
 gi|304283199|gb|EFL91602.1| putative ABC associated RTX toxin transporter [Candidatus Regiella
           insecticola LSR1]
          Length = 342

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 114/315 (36%), Gaps = 11/315 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQVE 73
           +  +R      + ++ ++ WSI+  ++I  ++ G ++  D+   ++     G++    V 
Sbjct: 36  SWARRTAWCISLFLLLVLGWSIIGKLDIHATALGRVIVSDHSKLVQPLVEQGVVVAINVR 95

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +G  +  G  L+    +     +      + + R     EK+ L  L     +      +
Sbjct: 96  DGEHVRAGQSLIELNPVGIDAEVRNINQQLMHRRL----EKARLTALLTDDPLANFTPPA 151

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             E           T   +    +      LK +   +     N   +E K S  + LL 
Sbjct: 152 ESE------PHLIETRRALLQRELDERNAELKRQDVELAVNQTNYQAVEQKISSQKRLLE 205

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + +K L   ++L +  ++++ +L +QE+    +  EL     +Q  +L            
Sbjct: 206 NIEKRLEARRSLAKTQSIAKMELLEQEKEWLNAKAELSSLNGQQSILLSQQQSYIQGKQR 265

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A   ++    L +     +    +   + + +  + + +P+ G +      +      
Sbjct: 266 FLAEKRRDYRERLNKASEVISQLTQEQIKIVERQNLQKLRAPVDGVVQQLAVHTLGGVVT 325

Query: 314 QSQPLMKIVPHSKLT 328
            +Q LM IVP +K  
Sbjct: 326 PAQQLMVIVPENKEL 340


>gi|296162710|ref|ZP_06845495.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
 gi|295887026|gb|EFG66859.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
          Length = 457

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/447 (14%), Positives = 150/447 (33%), Gaps = 25/447 (5%)

Query: 2   HHFMWKNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      +    P  + R +    +  ++  + WS +   ++ VS+ G +  E  V  I 
Sbjct: 17  HSVEGIAILTAEPVRIARALIWAMVALVVVGLLWSFVGRADVIVSAQGTLSPESEVRRIY 76

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G +    +  G  + +G  L               + +   L+  +  E +  D+ 
Sbjct: 77  APIDGELADLYIAEGQPVSKGDVLARLNARGA------IEAASNALQAQLKLEDAERDWK 130

Query: 121 NNKY--DVLEKAFESREEQLLDFLGKYHSTCSK----VFNYGISSVYRSLKMKLTRMRSI 174
                  ++E+   + + Q+     ++ +  S+    +     + +  +  +     R+ 
Sbjct: 131 QFPEKKALMERKAAALKAQMEVEAHQHENRVSEGTTKLAEGQKAELDEARSVLDNARRTR 190

Query: 175 YLNRLDLENKSSLLRA----LLSSHQKDLTMMKNLFEKNA--VSQNDLNQQERIVYKSTL 228
              R +L+  S L        ++  Q +      +   NA  V+Q+ L + +  +     
Sbjct: 191 EAARQELDRYSRLFAQPGGGGIAELQVEQKRTAAMEADNAYRVAQSKLAELDFRLSHEYA 250

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +    +         +   YD A  +  +   ++   L+  +   ++  +++      ++
Sbjct: 251 QANAQLETSGQQTTDLQLQYDSAVRDITDAEDKLRLQLQSARL-VSEAAARIRFENIDKD 309

Query: 289 Q-KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               IL+P++G I    S    +  Q + PL  I P      ++ ++       + +G  
Sbjct: 310 NFLLILAPVSGVITDVTSTQRGDKIQANAPLGGIAPKDARPVLKIEIAEHDRAFLHEGLP 369

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIEL 405
             ++F  +   R       +  I P       +   Q  YE  + +       +D    L
Sbjct: 370 VKLKFNAFPYQRYGLINGTLAYISPATKPSSTDK--QPVYEGRVTLDKDYYQIADTRYPL 427

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITD 432
           R G  A      +   L    + P   
Sbjct: 428 RYGMTASAEIVVRERRLIDLGLDPFRQ 454


>gi|91779616|ref|YP_554824.1| secretion protein HylD [Burkholderia xenovorans LB400]
 gi|91692276|gb|ABE35474.1| ABC efflux pump, membrane fusion protein, HlyD subfamily
           [Burkholderia xenovorans LB400]
          Length = 457

 Score =  161 bits (407), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/447 (14%), Positives = 150/447 (33%), Gaps = 25/447 (5%)

Query: 2   HHFMWKNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      +    P  + R +    +  ++  + WS +   ++ VS+ G +  E  V  I 
Sbjct: 17  HSVEGIAILTAEPVRIARALIWAMVALVVVGLLWSFVGRADVIVSAQGTLSPESEVRRIY 76

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G +    +  G  + +G  L               + +   L+  +  E +  D+ 
Sbjct: 77  APIDGELADLYIAEGQPVSKGDVLARLNARGA------IEAASNALQAQLKLEDAERDWK 130

Query: 121 NNKY--DVLEKAFESREEQLLDFLGKYHSTCSK----VFNYGISSVYRSLKMKLTRMRSI 174
                  ++E+   + + Q+     ++ +  S+    +     + +  +  +     R+ 
Sbjct: 131 QFPEKKALMERKAAALKAQMEVEARQHENRVSEGTTKLAEGQKAELDEARSVLDNARRTR 190

Query: 175 YLNRLDLENKSSLLRA----LLSSHQKDLTMMKNLFEKNA--VSQNDLNQQERIVYKSTL 228
              R +L+  S L        ++  Q +      +   NA  V+Q+ L + +  +     
Sbjct: 191 EAARQELDRYSRLFAQPGGGGIAELQVEQKRTAAMEADNAYRVAQSKLAELDFRLSHEYA 250

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +    +         +   YD A  +  +   ++   L+  +   ++  +++      ++
Sbjct: 251 QANAQLETSGQQTTDLQLQYDSAVRDITDAEDKLRLQLQSARL-VSEAAARIRFENIDKD 309

Query: 289 Q-KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               IL+P++G I    S    +  Q + PL  I P      ++ ++       + +G  
Sbjct: 310 NFLLILAPVSGVITDVTSTQRGDKIQANAPLGGIAPKDARPVLKIEIAEHDRAFLHEGLP 369

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIEL 405
             ++F  +   R       +  I P       +   Q  YE  + +       +D    L
Sbjct: 370 VKLKFNAFPYQRYGLINGTLAYISPATKPSSTDK--QPVYEGRVTLDKDYYQIADTRYPL 427

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITD 432
           R G  A      +   L    + P   
Sbjct: 428 RYGMTASAEIVVRERRLIDLGLDPFRQ 454


>gi|218440508|ref|YP_002378837.1| secretion protein HlyD [Cyanothece sp. PCC 7424]
 gi|218173236|gb|ACK71969.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7424]
          Length = 589

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 78/527 (14%), Positives = 177/527 (33%), Gaps = 106/527 (20%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R  P   + +    +   +  I W+ + PIE  V ++G++  +  V E+++P +G++K+ 
Sbjct: 65  RQSPTWSRGVVWTIVGVTVAAIIWAAVAPIEQVVQATGQLKPQGKVKEVQAPVNGVVKEV 124

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKK------------------------------ 100
            V++G ++ +G  L+ F+   +   +   K                              
Sbjct: 125 LVKDGEKVEKGEVLVIFDTEASKAELASYKQIRQALQQENQFYQMLMEENLDPSQVETAI 184

Query: 101 ---------VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                     ++   R  +  E   L  +     V   A +  +   L+   +   + + 
Sbjct: 185 IQLKLPKEVATLARNRIALMAENQ-LFRIQVGESVANAALDREQFARLEAARRELDSRAL 243

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLN-----------RLDLENKSSLLRALLSSHQKDLT 200
                I+ + + L     ++                 +   E+     +A L   Q+ L+
Sbjct: 244 AAKLEINQLQKQLSQTQVQLADAESQLVADRLVLQEIKTRNEDLLQQSQASLKIEQQILS 303

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTL-------------------------ELRENIH 235
            +  L E+ A+++  +N+Q++ V                              E++    
Sbjct: 304 EISPLAEEGALARYQINKQQQSVNDRIADIVEKQGNGEIEYKKQLQQIETRIAEIQRFQE 363

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI------------- 282
           E++ +   I++  +      A   K++   + +N++  A+  S+LT              
Sbjct: 364 EEQRLQAAISQARERYMNTQAVTEKDVRDRIAENKKRMAEVDSQLTKIIVDNRNRIAEYD 423

Query: 283 -----LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKLTYIRAKVT 335
                  +T   + + +P+ GT+   Q+F      Q   ++ L+KIVP          V 
Sbjct: 424 SQISRANQTLRYQELRAPVGGTVFDLQAF-PGFVPQPSQAEALLKIVP-DDYLIAEVDVI 481

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            K I  V+    A +R   +        K  +  I       D   +   +    +++ D
Sbjct: 482 NKDIGFVRNDMKADIRIDSFPFSEYGDIKGKVVSIGSDALPPDEIYKYYRF-PTRIQLDD 540

Query: 396 --LAFSDNNIELRNGFPAEVLFTAKN-TTLAQEIIHPITDNWPKIFE 439
             L   +  I L++G         +   T+        T+ + +  E
Sbjct: 541 QFLKIQNREIPLQSGMSISANIKIRENRTVLS----LFTEQFTRSVE 583


>gi|260220558|emb|CBA28216.1| hypothetical protein Csp_A06170 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 432

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 102/315 (32%), Gaps = 22/315 (6%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R + +         +        +      +++  T++ + +          + L++LL 
Sbjct: 111 RSKVIQPLEAATVRSIHVQDGQEVQEGQLLIELDSTQVGAEHSQXXXXXXXINRLQSLLV 170

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           +  +       L ++  VSQ+ L  + R       EL     E    +      + EA  
Sbjct: 171 TLNQREVDYAALAQQGFVSQHGLQDKTRDRQDIDNELLRVRAELTTAMS----AHQEALK 226

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTI----LEKTREQKTILSPIAGTIVYNQSFSSS 309
           E   YL EI + L Q Q T   E+ +L       ++  E   + SP+ GT+     F++ 
Sbjct: 227 EQNAYLAEIQKSLAQRQFTAQQEIERLAQEQVKSQQRLELLQLRSPVKGTVQQLAVFTAG 286

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                +Q LM IVP +        V  K I  +  G    ++   +   R       +  
Sbjct: 287 GVVTPAQALMVIVPAAHDISAEVMVANKDIGFIHTGQKVRIKLETFNFTRYGTIDGEVTW 346

Query: 370 IDPIISQQD------------NNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLF 415
           +      +D            N      Y+   +K+    +      + +  G       
Sbjct: 347 VSADALTRDPQNSNSANNPASNGQAPLAYFPAHVKLNKQTIDIEGKTMPVTPGLNITAEI 406

Query: 416 TAKNTTLAQEIIHPI 430
                T+   ++ PI
Sbjct: 407 KTGRRTVLDYLLSPI 421



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 76/209 (36%), Gaps = 9/209 (4%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            HPA  +R+  +    ++  + W+    I++   + G ++  +    I+   +  ++   
Sbjct: 69  PHPAP-RRIMAIICTCVVAALIWAAFGKIDVVALAPGRVIVSERSKVIQPLEAATVRSIH 127

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V++G ++ +G  L+  +  +              +   + +    L+     Y  L +  
Sbjct: 128 VQDGQEVQEGQLLIELDSTQVGAEHSQXXXXXXXI-NRLQSLLVTLNQREVDYAALAQQG 186

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              +  L D         +++     + +  ++      ++       ++  + SL +  
Sbjct: 187 FVSQHGLQDKTRDRQDIDNELLRVR-AELTTAMSAHQEALKEQNAYLAEI--QKSLAQRQ 243

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            ++ Q+    ++ L ++   SQ  L   +
Sbjct: 244 FTAQQE----IERLAQEQVKSQQRLELLQ 268


>gi|209520346|ref|ZP_03269111.1| secretion protein HlyD family protein [Burkholderia sp. H160]
 gi|209499220|gb|EDZ99310.1| secretion protein HlyD family protein [Burkholderia sp. H160]
          Length = 457

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 65/446 (14%), Positives = 144/446 (32%), Gaps = 23/446 (5%)

Query: 2   HHFMWKNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      +  + P  + R +    +  ++  + WS +   ++ VS+ G +  E  V  I 
Sbjct: 17  HSVEGIAILTSEPVRIARALIWAMVALVVSGLLWSFVGRADVIVSAPGTLSPESEVRRIY 76

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G +    +  G  + +G  L               + +   L+  +  E +  ++ 
Sbjct: 77  TPIDGELADLYIAEGQPVSKGDVLARLNARGA------IEAASNALQTQLKLEDAEREWK 130

Query: 121 NNKY--DVLEKAFESREEQLLDFLGKYHSTCSK---VFNYGISSVYRSLKMKLTRMRSIY 175
                  ++E+   S + QL      + +  S+       G  +     +  L   R + 
Sbjct: 131 QFPEKKALMERKAASLKAQLDVEERLHENRVSEGTTKLAEGQKAELDEARSSLDNARRVR 190

Query: 176 LNRLDLENKSSLLRAL-----LSSHQKDLTMMKNLFEKNA--VSQNDLNQQERIVYKSTL 228
                  ++ S L A      ++  Q +      L   NA  V+Q+ L + +  +     
Sbjct: 191 EAASQELDRYSRLFAQPGGGGIAELQVEQKRTAALEADNAYRVAQSKLAELDFRLSHEYA 250

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +    +         +   YD A  +  +   ++   L+  +                  
Sbjct: 251 QANAQLATSGQQSTDLQLQYDSAVRDITDAEDKLRVQLQSARLEADAAARVRFENIDKDN 310

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              IL+P++G I    S    +  Q + PL  I P      ++ ++  +    + +G   
Sbjct: 311 FLLILAPVSGVITDVTSTQRGDKIQANAPLGGIAPKDARPVLKIEIAERNRAFLHEGLPV 370

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIELR 406
            ++F  +   R       +  I P  + + +    Q  YE  + +       +     LR
Sbjct: 371 KLKFSAFPYQRYGLISGTLAYISP--ATKPSAQDKQPVYEGRVTLDKDYYQVAGTRYPLR 428

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITD 432
            G  A      +   L    + P  +
Sbjct: 429 YGMTATAEIVVRERRLIDLGLDPFRE 454


>gi|91791840|ref|YP_561491.1| secretion protein HlyD [Shewanella denitrificans OS217]
 gi|91713842|gb|ABE53768.1| secretion protein HlyD [Shewanella denitrificans OS217]
          Length = 413

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/416 (14%), Positives = 150/416 (36%), Gaps = 52/416 (12%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +++I I+  + +S     E      G ++  + +  + S  SG++ +  V+ G  + +G 
Sbjct: 38  ITVISILAFLFYSDYAKKEKV---KGYLVPTNGLARVYSHTSGVVSQIAVKEGDIVTKGD 94

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            LL+  + +                                   L+ +  S +E++    
Sbjct: 95  TLLSVSNDKF----------------------------------LQNSLSSDQEKIKQID 120

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTM 201
            + +    ++  Y   S+++   ++L R+   +   +++L  + SLLR  +   +  L  
Sbjct: 121 KQINLVKGQLAQY--DSLFKERALRLNRIIHFLKKEQIELALQGSLLRDRVQLAKDRLDN 178

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +K L   N  SQ+++  Q        L+ ++   E   ++         A  + A    E
Sbjct: 179 IKTLQIDNFASQSEVKTQ----LDLVLDFQQRTQEHNTIVLKSETNLANALNDKARLPFE 234

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
             + ++Q     +   +  T + +      + +PI GT+   + F+   +A     L+ I
Sbjct: 235 KQQQVDQLNIELSKLANNKTAILEN-NNLVLKAPITGTVSSIK-FNIGEFASSGDYLVII 292

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-IISQQDNN 380
           +P          V  + I  +K+G    ++   +   +       +  +   II   +  
Sbjct: 293 IPSDSELEAEVFVPTRAIAFIKEGDEVNIKLDAFPFQKFGVTHGEVSHVAKNIIFSAETT 352

Query: 381 LQ---TQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            +    +  Y++ +++         N   L  G   +        TL + ++ P+ 
Sbjct: 353 SKLSFNEPVYKIKVRLAQQYIKTYGNKTALIPGMLLQADINTGKRTLIEWLLEPLF 408


>gi|170690703|ref|ZP_02881869.1| secretion protein HlyD family protein [Burkholderia graminis C4D1M]
 gi|170143952|gb|EDT12114.1| secretion protein HlyD family protein [Burkholderia graminis C4D1M]
          Length = 457

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 64/444 (14%), Positives = 147/444 (33%), Gaps = 19/444 (4%)

Query: 2   HHFMWKNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      +    P  + R +    +  ++  + WS +   ++ VS+ G +  E  V  I 
Sbjct: 17  HSVEGIAILTAEPVRIARALIWAMVALVVAGLLWSFVGRADVIVSAQGTLSPESEVRRIY 76

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G +    +  G  + +G  L           I+    +++      D E+    F 
Sbjct: 77  APIDGELADLYIAEGQPVSKGDVLARLN---ARGAIEAASNALQAQLKLEDAERDWKQFP 133

Query: 121 NNKYDVLEKAFESREEQLLDFL---GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             K  +  KA   + +  ++      +     +K+     + +  +        R     
Sbjct: 134 QKKALMERKAAALKAQMEVEARLHENRVSEGTTKLAEGQKAELDEARSALDNARRVREAA 193

Query: 178 RLDLENKSSLLRA----LLSSHQKDLTMMKNLFEKNA--VSQNDLNQQERIVYKSTLELR 231
             +L+  S L        ++  Q +     ++   NA  V+Q+ L + +  +     +  
Sbjct: 194 HQELDRYSRLFAQPGGGGIAELQVEQKRTASMEADNAYRVAQSKLAELDFRLSHEYAKAN 253

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ-K 290
             +         +   YD A  + A+   ++   L+  +   ++  +++      ++   
Sbjct: 254 AELETSGQQATDLQLQYDAAVRDVADAEGKVRLQLQSARL-VSEAAARIRFENIDKDNFL 312

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            IL+P++G I    S    +  Q + PL  I P      ++ ++       + +G    +
Sbjct: 313 LILAPVSGVITDVTSTQRGDKIQANSPLGGIAPKDAKPVLKIEIAEHDRAFLHEGLPVKL 372

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIELRNG 408
           +F  +   R       +  I P       +   Q  YE  + +       +  +  LR G
Sbjct: 373 KFNAFPYQRYGLINGTLAYISPATKPSLTDK--QPVYEGRVTLDKNYYEIAGTHYPLRYG 430

Query: 409 FPAEVLFTAKNTTLAQEIIHPITD 432
             A      +   L    + P   
Sbjct: 431 MTASAEIVVRERRLIDLGLDPFRQ 454


>gi|73540630|ref|YP_295150.1| secretion protein HlyD [Ralstonia eutropha JMP134]
 gi|72118043|gb|AAZ60306.1| Secretion protein HlyD [Ralstonia eutropha JMP134]
          Length = 460

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 70/447 (15%), Positives = 149/447 (33%), Gaps = 25/447 (5%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      +    P  L  +T+++    ++  + WS     ++ V++ G +  E  V    
Sbjct: 20  HGGEGIAILTAEPWRLSLLTIVTTFALVVCALIWSFFGHADVIVTAEGTLAPESEVRRFY 79

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G +    V  G  + +   L               + +   L   +  E S  ++ 
Sbjct: 80  APVDGELADLYVAEGQPVSKDDVLARLNARGA------IEAAANALEAQLKLEDSEREWK 133

Query: 121 NNKYD-VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-------RMR 172
                  L     +  +Q +D   + H T        ++   R+   +         R R
Sbjct: 134 QFPEKKALMARRAAALKQQIDVGTRQHETRIAEGTTRLTEQQRAQIQEARSNVENSRRAR 193

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN----AVSQNDLNQQERIVYKSTL 228
                  D   +   L A     Q  +   +   ++      V+Q+ L + E    +   
Sbjct: 194 DFARQEQDRYTRLFALPAGGGVSQSQVDAKRAATQEAENTLRVAQSRLAELEARQGQELS 253

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +    +      L  +   YD A  E A+   ++   + Q  R  A+  +++      ++
Sbjct: 254 QANVQLESSGQELAGLRVQYDAAMREIASTEDKLRLQV-QTARLVAEAAARIRFENIDKD 312

Query: 289 Q-KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               IL+P++G I    S    +  Q + P+  I P+     ++  +  +    +K+G  
Sbjct: 313 NFLLILAPVSGVITDVTSTQRGDKIQANTPIGGIAPNDARPVLKIAIAERDRAFLKEGLP 372

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIEL 405
             ++F  +   R    +  +E I P  + +      Q  YE  ++++    A  +    L
Sbjct: 373 VKLKFNAFPYQRYGLIEGTLEYISP--ATKPGGPDKQPVYEGRIRLSRDYYAVGETRYPL 430

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITD 432
           R G  A      +   L    + P   
Sbjct: 431 RYGMTATAEIVVRERRLIDLGLDPFRQ 457


>gi|255593672|ref|XP_002535923.1| Hemolysin secretion protein D, chromosomal, putative [Ricinus
           communis]
 gi|223521507|gb|EEF26461.1| Hemolysin secretion protein D, chromosomal, putative [Ricinus
           communis]
          Length = 305

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 97/298 (32%), Gaps = 3/298 (1%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRS-LKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + +D         ++ F  G+   YR  L      +            + + L A     
Sbjct: 2   EAVDGAFTKRQQEAQRFAEGVWREYRDKLASARAELAKRQAELDSTRAEITKLAATAPLA 61

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +++    + L     V+Q+D   +E+       EL       + +   I E   +     
Sbjct: 62  RENANHYRELAAGKYVAQSDFYDKEQAAITQEQELAAQRSHARELAAGIAEQRSDIEGTV 121

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           + + ++   +LE+  + F    S  T          + +P++GT+      +       +
Sbjct: 122 SQFRRQQLDELEKATQQFTQNRSDETKARTREALLVLTAPVSGTVQQLAVHTLGGVVTTA 181

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q +M+IVP      + A V  + +  +  G  A V+   +   R    +  + ++     
Sbjct: 182 QAVMEIVP-DDTLEVEATVENRDVGFLGVGQRAAVKVEAFPYTRYGMLEGTVVELSNDAV 240

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           Q            V L    +      I L  G            ++AQ  + P+ ++
Sbjct: 241 QDRKLGLAFTV-RVRLASNRMKIDHRWITLTPGMAVSAEIRTGKRSVAQYFLGPLVES 297


>gi|196019344|ref|XP_002118966.1| hypothetical protein TRIADDRAFT_62944 [Trichoplax adhaerens]
 gi|190577508|gb|EDV18548.1| hypothetical protein TRIADDRAFT_62944 [Trichoplax adhaerens]
          Length = 419

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 126/320 (39%), Gaps = 18/320 (5%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K + +     ++   +   + +     WS   P++ +  + G ++  D+  +I     GI
Sbjct: 99  KEISKQIKFPIRFGLIAVAVTLGFFGIWSGFAPLDSASIAEGYVVLSDHRKQIFH-EGGI 157

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-------------NLRCHIDTE 113
           ++K  +++G ++ +G PL+   +  T   ++     ++              L       
Sbjct: 158 VEKILIKDGDEVKKGQPLIILNEARTKSDLEKTLWQLRYAIIVDERLSKSLKLISDYQIN 217

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K   DF N + +   K  E  + ++++ +          FN     V  S+K   T+++ 
Sbjct: 218 KDIKDFTNIQVNFDNKYLEKSDSKIMELVN----AQKNSFNSYKLFVESSIKTHDTQVKQ 273

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           I      +E + +  +  +   +K+ +  KNL +K   +   L+Q +  + +   ++ E+
Sbjct: 274 IESEIKSVEERINAYKENVIILEKEYSRKKNLHDKKLETSERLSQTKLELQRYKGQVSED 333

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +  ++   I+E+  + +         +S + ++N        ++    +   E+ TI 
Sbjct: 334 EAKIASLTHKISEVNSKQSNFLDEQNVRLSDEYKRNHTELLTLEAQYIQAKDAHERTTIT 393

Query: 294 SPIAGTIVYNQSFSSSNYAQ 313
           +P AG I      +  +  +
Sbjct: 394 APNAGIITGLNIHTIGSAIR 413


>gi|323528887|ref|YP_004231039.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1001]
 gi|323385889|gb|ADX57979.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1001]
          Length = 457

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/444 (14%), Positives = 150/444 (33%), Gaps = 19/444 (4%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      +    P  + R  + +++  ++  + WS +   ++ V++ G +  E  V  I 
Sbjct: 17  HSVEGIAILTAEPVRIARALIWTMVALVVAGLLWSFVGRADVIVTAQGTLSPESEVRRIY 76

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G +    +  G  + +G  L           I+    +++      D E+    F 
Sbjct: 77  APIDGELADLYIAEGQPVSKGDILARLN---ARGAIEAASNALQAQLKLEDAERDWKQFP 133

Query: 121 NNKYDVLEKAFESREEQLLDFL---GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             K  +  KA   + +  ++      +     +K+     + +  +  +     R     
Sbjct: 134 QKKALMERKAAALKAQMEVEARLHENRVSEGTTKLAEGQKAELDEARSVLDNARRVREAA 193

Query: 178 RLDLENKSSLLRA----LLSSHQKDLTMMKNLFEKNA--VSQNDLNQQERIVYKSTLELR 231
             +L+  S L        ++  Q +      L   NA  V+Q+ L + +  +     +  
Sbjct: 194 HQELDRYSQLFAQPGGGGIAQLQVEQKRTAALEADNAYRVAQSKLAELDFRLSHEYAKAN 253

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ-K 290
             +         +   YD A  +  +   ++   L+  +   ++  +++      ++   
Sbjct: 254 AELETSGQQTTDLQLQYDAAVRDITDAEDKVRLQLQSARL-VSEAAARIRFENIDKDNFL 312

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            IL+P++G I    S    +  Q + PL  I P      ++ ++       + +G    +
Sbjct: 313 LILAPVSGVITDVTSTQRGDKIQANSPLGGIAPKDAKPILKIEIAEHDRAFLHEGLPVKL 372

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIELRNG 408
           +F  +   R       +  I P  + + + L  Q  YE  + +       +     LR G
Sbjct: 373 KFNAFPYQRYGLISGTLAYISP--ATKPSLLDKQPVYEGRVTLEKNYYEIAGTRYPLRYG 430

Query: 409 FPAEVLFTAKNTTLAQEIIHPITD 432
             A      +   L    + P   
Sbjct: 431 MTASAEIVVRERRLIDLGLDPFRQ 454


>gi|56476343|ref|YP_157932.1| type I secretion protein [Aromatoleum aromaticum EbN1]
 gi|56312386|emb|CAI07031.1| predicted gram-negative bacterial type I secretion protein
           [Aromatoleum aromaticum EbN1]
          Length = 457

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 72/446 (16%), Positives = 152/446 (34%), Gaps = 23/446 (5%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      +    P+      + +++G ++  + WS +   ++ V++ G +  E +V  + 
Sbjct: 17  HSAEGIAILIAEPSRFGLALVAAVLGLVLSALVWSFVGRADVIVTAHGVLAPESDVRRVY 76

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G +    +E G  + QG  L               + +   L   +  E +  ++ 
Sbjct: 77  APIDGELADIYMEAGQPVSQGDVLARLNARGAV------EAATHALEAQLKLEDAEREWK 130

Query: 121 NNKY--DVLEKAFESREEQLLDFLG----KYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
                  +LE+   + ++Q+   L     +     +K+     + + ++        R  
Sbjct: 131 QFPERKALLERKVAALKQQIEAALQLHERRTAEGTTKLAEAQRAQLQQARSELDNARRMR 190

Query: 175 YLNRLDLENKSSLLR----ALLSSHQKDLTMMKNLFEKNA--VSQNDLNQQERIVYKSTL 228
              R++L+    LL       +S  Q +      L  +NA  V+Q+ L + +  + + T 
Sbjct: 191 DSTRMELDRFQRLLALPGGGGVSELQVEAKKSAYLAAENALRVAQSRLGELDFRLSQETA 250

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                +      L  +   YD A  E AN   ++   L+  +                  
Sbjct: 251 RATVELESGDQELTRLRIQYDAAAREIANEEDKLRLQLQTARLAANAAERIRFENIDKDN 310

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              I++P++G I    S    +  Q + PL  I P      ++  +  +    +++G   
Sbjct: 311 FLLIIAPVSGVITDVASTQPGDKIQANTPLGGIAPKDARAVLKMDIAERDRAFLREGLPV 370

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE--VILKITDLAFSDNNIELR 406
            ++F  +   R       +E I P  S        +  YE  V L       +D    +R
Sbjct: 371 KLKFNAFPYQRYGLIDGRLEFISPATSPA--AQSKEPVYEGHVTLSRDHYEVADTRYPVR 428

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITD 432
            G  A      +   L    + P   
Sbjct: 429 YGMTATAEIVVRERRLIDLALDPFRQ 454


>gi|33864946|ref|NP_896505.1| effux transporter [Synechococcus sp. WH 8102]
 gi|33638630|emb|CAE06925.1| possible effux transporter [Synechococcus sp. WH 8102]
          Length = 420

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 68/443 (15%), Positives = 147/443 (33%), Gaps = 48/443 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L R    +   +    +        W+ L P+  +V+  G++     + ++++   G++ 
Sbjct: 13  LLRKTRRNSSVLVWTLVGTTTFATLWAFLAPLPETVAVQGKLQPTQAIQDVEAALPGVVD 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V+ G  +  G  LL F+  ET   ++            I  E      + N+  + E
Sbjct: 73  SVLVQEGQAVKAGDLLLRFDPRETKAQLNA---------ARIQREALHNKIIINRVLLGE 123

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +  E      L+ L +     S V      +  R+                    + + L
Sbjct: 124 RPEEDLTPNQLNLLQQLREQRSGVRTAQREAEQRTRV------------------RIAGL 165

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L + +      + L E  A S+         V   + EL         + R +  L 
Sbjct: 166 QRSLVTAETIAESYQLLLEDGATSELQALSARSNVDDLSTELDA-------LQRELASLT 218

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A  +  +  ++EQN R+ A+   K+   +    +  + + I   +      S+
Sbjct: 219 ANHRAANAGSMAVMRSEIEQNLRSIAELDRKIRAADVRLSRIELRASIDAVVFDITV-SA 277

Query: 309 SNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +    +   +PL+K+VP +     +  +    I  V     A +    +         A
Sbjct: 278 GSVIDPNTEPKPLLKLVPQND-LQAKVFIPNDAIGFVGTNQRADISLNAFKASDFAYLPA 336

Query: 366 IIEKI--DPIISQQDNNLQTQE----YYEVILKITDLA--FSDNNIELRNGFPAEVLFTA 417
            +E++  D +   +      QE    Y+  +LK+   +      ++ L+ G         
Sbjct: 337 TVERVGSDALTPDEQRRELGQEAQGLYFPAVLKLQRQSLQLGQRSVPLQPGMSLTADIHL 396

Query: 418 KNTTLAQEIIHPITDNWPKIFER 440
           ++      I   + D+  +  ER
Sbjct: 397 RDRRFISAITD-LLDDKRRGLER 418


>gi|187918725|ref|YP_001887756.1| secretion protein HlyD family protein [Burkholderia phytofirmans
           PsJN]
 gi|187717163|gb|ACD18386.1| secretion protein HlyD family protein [Burkholderia phytofirmans
           PsJN]
          Length = 457

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 67/444 (15%), Positives = 146/444 (32%), Gaps = 19/444 (4%)

Query: 2   HHFMWKNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      +    P  L R +    +  ++  + WS +   ++ VS+ G +  E  V  I 
Sbjct: 17  HSVEGIAILMAEPVRLARALIWAMVALVVVGLLWSFVGRADVIVSAQGTLSPESEVRRIY 76

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G +    +  G  + +G  L           I+    +++      D E+    F 
Sbjct: 77  APIDGELADLYIAEGQPVQKGDVLARLN---ARGAIEAASNALQAQLKLEDAERDWKQFP 133

Query: 121 NNKYDVLEKAFE---SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             K  +  KA       E +      +     +K+     + +  +  +     R+    
Sbjct: 134 EKKALMERKAAALKTQMEVEARQHENRVSEGTTKLAEGQKAELDEARSILDNARRTREAA 193

Query: 178 RLDLENKSSLLRA----LLSSHQKDLTMMKNLFEKNA--VSQNDLNQQERIVYKSTLELR 231
           R +L+  S L        ++  Q +      +   NA  V+Q+ L + +  +     +  
Sbjct: 194 RQELDRYSRLFAQPGGGGIAELQVEQKRTAAMEADNAYRVAQSKLAELDFRLSHEYTQAN 253

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ-K 290
             +         +   YD A  +  +   ++   L+  +   ++  +++      ++   
Sbjct: 254 AQLETSGQQTTDLQLQYDSAVRDITDAEDKLRLQLQSARL-VSEAAARIRFENIDKDNFL 312

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            IL+P++G I    S    +  Q + PL  I P      ++ ++       + +G    +
Sbjct: 313 LILAPVSGVITDVTSTQRGDKIQANAPLGGIAPKDARPVLKIEIAEHDRAFLHEGLPVKL 372

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIELRNG 408
           +F  +   R       +  I P       +   Q  YE  + +       +D    LR G
Sbjct: 373 KFNAFPYQRYGLISGTLAYISPATKPSLTDK--QPVYEGRVTLDKNYYQIADTRYPLRYG 430

Query: 409 FPAEVLFTAKNTTLAQEIIHPITD 432
             A      +   L    + P   
Sbjct: 431 MTASAEIVVRERRLIDLGLDPFRQ 454


>gi|150388860|ref|YP_001318909.1| secretion protein HlyD family protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149948722|gb|ABR47250.1| secretion protein HlyD family protein [Alkaliphilus metalliredigens
           QYMF]
          Length = 491

 Score =  157 bits (398), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 67/473 (14%), Positives = 156/473 (32%), Gaps = 53/473 (11%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + L  + P     + +  +IG++ +   W+ +  I+I V ++G +     +  I +   G
Sbjct: 15  RELLESRPHPFTVIFIYLLIGLLAIAFIWTYIGEIDIVVKANGVVRPNQRISTINNIVPG 74

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +K+  +ENG  + +   L T +  E  +     +  +   +  +  +      +    +
Sbjct: 75  KVKELYIENGKTVKKDDILYTIDHTELKNKQAFIEEELSRKKTELKNQNIFKQSIIENKN 134

Query: 126 VLEKAFESRE-----------------EQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKM 166
              +  + +E                 E +   + K ++T + + N    ++++  +   
Sbjct: 135 SFNQQEKDQEVHYYKYIKYQAEQGQTKENVNLIISKINTTQTILQNTQTLLTAIENNENK 194

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL---------- 216
                   Y+  LD       L+  +   + DL + + L +  AVSQ D           
Sbjct: 195 FEDTENEYYIKFLDYSLNLKDLQKEVDKKKIDLEIQEKLHQSGAVSQMDYKNVKDMLEKM 254

Query: 217 -NQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN------------LEFANYLKEIS 263
             +++R    + L L+ ++ E + +L  +     +              +  AN+  E  
Sbjct: 255 QLEKKRFENSTRLSLKTSMEENQRLLNQLEIQLQQIAPGIVEQIENHPDIAAANHRTENI 314

Query: 264 RDLEQN----QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
             + +     +       + L  ++   E     +PI G I      +  +  Q   P+ 
Sbjct: 315 IAINETIKYLEAEINQLQNNLKGIKLDIENSISKAPIDGHINIITDINQGDNIQAGTPIA 374

Query: 320 KIVPHSKL-TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            I+P+      +R   + + I ++  G      F         +    I +I        
Sbjct: 375 TIIPYDDSNYTVRIYASNEDIANINIGDKVKYNFMALPYKEYGELTGKITRIATDTKTTQ 434

Query: 379 NNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                  YY V   I   A         +++ G   E     K   +   ++ 
Sbjct: 435 EGNT--SYYLVESDIETRALISYKGEEADIKVGMVCEARVVTKTKKILHYLLE 485


>gi|307726908|ref|YP_003910121.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1003]
 gi|307587433|gb|ADN60830.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1003]
          Length = 457

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 64/444 (14%), Positives = 145/444 (32%), Gaps = 19/444 (4%)

Query: 2   HHFMWKNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      +    P  + R +    +  ++  + WS +   ++ VS+ G +  E  V  I 
Sbjct: 17  HSVEGIAILTAEPVRIARALIWAMVALVVAGLLWSFVGRADVIVSAQGTLSPESEVRRIY 76

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G +    +  G  + +G  L           I+    +++      D E+    F 
Sbjct: 77  APIDGELADLYIAEGQPVSKGDVLARLN---ARGAIEAASNALQAQLKLEDAERDWKQFP 133

Query: 121 NNKYDVLEKAFESREEQLLDFL---GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             K  +  KA   + +  ++      +     +K+     + +  +  +     R     
Sbjct: 134 QKKALMERKAAALKAQMEVEARLHENRVSEGTTKLAEGQKAELDEARSILDNARRVREAA 193

Query: 178 RLDLENKSSLLRA----LLSSHQKDLTMMKNLFEKNA--VSQNDLNQQERIVYKSTLELR 231
             +L+  S L        ++  Q +      +   NA  V+Q+ L + +  +     +  
Sbjct: 194 HQELDRYSRLFAQPGGGGIAELQVEQKRTAAMEADNAYRVAQSKLAELDFRLSHEYAKAN 253

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ-K 290
             +         +   YD A  +  +   ++   L+  +   ++  +++      ++   
Sbjct: 254 AELETSGQQATELQLQYDAAVRDITDAEDKLRLQLQSARL-VSEAAARIRFENIDKDNFL 312

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            IL+P++G I    S    +  Q + PL  I P      ++ ++       + +G    +
Sbjct: 313 LILAPVSGVITDVTSTQRGDKIQANSPLGGIAPKDAKPVLKIEIAEHDRAFLHEGLPVKL 372

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIELRNG 408
           +F  +   R       +  I P       N   Q  YE  + +       +     LR G
Sbjct: 373 KFNAFPYQRYGLIGGTLAYISPATKPSLQNK--QPVYEGRVILDRNYYEIAGTRYPLRYG 430

Query: 409 FPAEVLFTAKNTTLAQEIIHPITD 432
             A      +   L    + P   
Sbjct: 431 MTASAEIVVRERRLIDLGLDPFRQ 454


>gi|119513589|ref|ZP_01632602.1| hypothetical protein N9414_12838 [Nodularia spumigena CCY9414]
 gi|119461758|gb|EAW42782.1| hypothetical protein N9414_12838 [Nodularia spumigena CCY9414]
          Length = 467

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 64/444 (14%), Positives = 148/444 (33%), Gaps = 44/444 (9%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
               +  +  ++  +  S  +   ++V ++  +     V  ++ P  G I+K  V+    
Sbjct: 27  SLAGVTLVGTVVSAVALSSFVKYNVTVKTTATVRPTGEVRVVQPPKEGSIEKILVQQNQV 86

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + QG  +   +  +        + SI+     +    S L+ L+N+    ++        
Sbjct: 87  VKQGDIIAILDSQDLQIKQSQLQGSIQQNSLQLIQINSQLESLDNQMLAEQRVI------ 140

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                   ++  S +         R +    + ++         + +     ++L+  Q 
Sbjct: 141 ----QQTVYAAQSDLARNQRDYQDREI-ATNSELKVAEAELRRTQAQLQTASSVLAHAQT 195

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-----NIHEQKNMLRHINELYDEAN 252
           +    K L E   VS +  +++  +V ++   L        I + K  L        +A 
Sbjct: 196 ESDRYKGLSESGVVSNSQYDEKSLLVAQAKSNLVAAKEAVQIAQSKVNLAQAVLNPSQAA 255

Query: 253 LEFANYL-------------------KEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +E A                      + + +     Q        +L  +    +   I 
Sbjct: 256 VEIAQIRILQETARGEASIATLNKEKQALIQRRVDMQNQLYQLRQELQQVVNEVQGNIIR 315

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +   G I+     +     + S+P+ +IVP +    I+A +    IQ V  G    +R  
Sbjct: 316 ATSDGIILKLNLRNPGQVVRASEPVAEIVPQNAPLVIKAMIPTADIQKVGIGQDVLLRVD 375

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNL-------QTQEYYEVILKITDLAFSDNNI--E 404
                     KA++  I P +    NN+           Y+E  ++  ++ F + +    
Sbjct: 376 ACPYPDYGTLKAVVTNISPDVMTTANNMGAASSAATAGSYFEATVQPVNMTFGNGDRHCR 435

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIH 428
           +++G   +    +K  T  Q I+ 
Sbjct: 436 IQSGMNTKADIISKEETAMQFILR 459


>gi|113954801|ref|YP_732049.1| transporter component [Synechococcus sp. CC9311]
 gi|113882152|gb|ABI47110.1| possible transporter component [Synechococcus sp. CC9311]
          Length = 419

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 72/427 (16%), Positives = 146/427 (34%), Gaps = 68/427 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + + +     +K +T   I   +  I W  +   E  V ++G++    NV E++ P   +
Sbjct: 42  EAVLQQSQVWVKAVTWSLIGTTVFFIGWLGIARTEEVVVATGKLEPVGNVKEMRIPAGAV 101

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  V++G ++++   L+  +                                      
Sbjct: 102 VEEILVKSGERVIKDQALIRLDQ------------------------------------- 124

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                ES  EQL           S++         +    K+ R R++ LNR  L    S
Sbjct: 125 -----ESTAEQLKSLEQGVKEKTSQIMQKQ----EQLSLKKMERKRTLDLNREQL----S 171

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L    + L  ++ L  + A       QQ   V     EL +   E K  +  IN+
Sbjct: 172 TTGNNLDLESQILDRLQGLAREGAAPDIQYLQQRNKVAGLKGELIQLEIEGKRQINQINQ 231

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++ N E A    E            A   + LT +  T + + + +P++G +   +  
Sbjct: 232 QIEQLNAELAGLRSE-----------RAQLNANLTEVRVTNKNQILRAPVSGIVFDLKLN 280

Query: 307 SSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +      AQ SQ ++K+VP +       ++   +I  V+ G  A +    +        +
Sbjct: 281 NPGYISQAQSSQAVLKVVPFN-TLEADVEIPSNKIGFVRIGQQADISIDSFPASDFGVLE 339

Query: 365 AIIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNT 420
             +  +       D     Q Y Y  ++K+        N   + L+ G         ++ 
Sbjct: 340 GKVLSVGSDALPPDQQQMRQGYSYPAVIKLDSQQLKIKNGKTLPLQVGMSLTANIKLRSV 399

Query: 421 TLAQEII 427
           +  Q ++
Sbjct: 400 SYLQLLL 406


>gi|169343217|ref|ZP_02864231.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium perfringens C str. JGS1495]
 gi|169298639|gb|EDS80719.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium perfringens C str. JGS1495]
          Length = 509

 Score =  155 bits (393), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 76/490 (15%), Positives = 163/490 (33%), Gaps = 70/490 (14%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  + P     + +  +I +I   +TW+     EI V   G +  ++ +  I +   G
Sbjct: 15  RQVMESKPNKFIMIFIYILIAVIATFLTWAWFSEKEIIVKVQGIVRPDNEIHSISNILQG 74

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL------------------- 106
            +K  +++NG  I +G  L   +  E  D  +     I  L                   
Sbjct: 75  EVKSVKMKNGEDIKKGDILFEIDSSELQDKKNQINDQIDYLDKDNKNLKKLNKSINENTN 134

Query: 107 ---------------RCHIDTEKSALDFLNNKYD----VLEKAFESREEQLLDFLGKYHS 147
                          + +    K +L+  NN  D    +L +              K ++
Sbjct: 135 YFKNNDEEKEYYYKFKSYEAGNKVSLEEKNNISDSKNELLNEKANLEILSKSISENKNYT 194

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               V++    S   S +M L +   +  ++  L  +  L    +     +   ++NL E
Sbjct: 195 EKGSVYSAQYDSYISSREMILNKTEQLKNSKDSLNKEIELNNKEIEGLNSENNTIENLEE 254

Query: 208 KNAVSQNDLNQQERIVYKSTLELREN-----------IHEQKNMLRHINELYDEANLEFA 256
           K  V      Q    V +  LE++ N           I + K  +  IN+  ++ N   +
Sbjct: 255 KKLVFDEKNKQLNNQVEQIALEIKNNNEQLEKLKSDTIAQIKGNIDKINQSINKLNSNIS 314

Query: 257 NYLKEISRDLEQNQRT-FADEMSKLT--------------ILEKTREQKTILSPIAGTIV 301
           +  + ++   ++N+ T  A    K+                +E++ E+  + +P+ G + 
Sbjct: 315 SLEESVNISKDKNKTTVLAQIEEKMNLNIQKKKELEENKKQIEQSIEKCIVKAPVDGKLN 374

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
            N +       Q    +  I+P S    +   +  K I ++K G      F         
Sbjct: 375 VNINLEQGVVLQTGAMVANIIPDSDTYKVDLMIPTKDIANIKDGEEIKYSFEALPYREYG 434

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAK 418
                +E I P    + +N +   ++     +   +   N  E   ++ G   E     +
Sbjct: 435 FLDGKVENISPDS--KIDNEKGIAFFVGEGSLNSNSLYSNKGEESFIKPGMMCEARIITR 492

Query: 419 NTTLAQEIIH 428
              +   ++ 
Sbjct: 493 KEKMLYYLLE 502


>gi|308205553|gb|ADO19032.1| HlyD family secretion protein [Nostoc flagelliforme str.
           Sunitezuoqi]
          Length = 444

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/435 (12%), Positives = 145/435 (33%), Gaps = 49/435 (11%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +   +  I  +    + + +    + V +   +     +  +++   G +   +V+    
Sbjct: 27  RLGGIFLIGSVGAAFSLASVFQYNVIVKADATVRPTGEIRLVQAAAEGTVTSIKVKENQV 86

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  +   ++                    + T+KS L     +  +     +++ + 
Sbjct: 87  VKKGDTIALIDN------------------SQLQTKKSQLLGTIEQNQLQRAQIDAQLKA 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L + +    +   +      + + R         R     ++    +   + A +   ++
Sbjct: 129 LENQMAAESNAMRQAITSAKADLSR-------NKRDYQDKQITSLAQVQEIEAGVELARE 181

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR----------ENIHEQKNMLRHINEL 247
           +L   + L    A++   + ++E+    +T  L            N+   +  +      
Sbjct: 182 ELKRYQQLGNTGAIAALQIKEKEQAFKAATARLDNAKAGLNPSDANVAIAQERISQELTK 241

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            +    +     +E+ R   + Q   +    +L  + K  ++  I +   GTI+  +  +
Sbjct: 242 GESTIAQLNKEKEELIRRQVEVQNQISSAQQELKQVFKELQKSVIRTSEGGTILKLELRN 301

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV----------RFPHYAD 357
           +    +    + +I P++    I+A+V   +I  V+    A V          R   Y  
Sbjct: 302 AGQVVRVGDAIAQIAPNNAPFVIKARVPSSEISKVQVCKVAQVAKCSEGEVQMRLSAYPY 361

Query: 358 IREKKFKAIIEKIDPI--ISQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEV 413
                 K  +  I      SQ + N+    YYEV ++   L    +D +  ++ G     
Sbjct: 362 PDYGILKGAVRGISADAITSQGNGNIPIAPYYEVTIEPEKLYLKKADKSYPIQAGMEVTA 421

Query: 414 LFTAKNTTLAQEIIH 428
              +K  TL   I+ 
Sbjct: 422 EIISKKETLLTFILR 436


>gi|260222441|emb|CBA32008.1| Alkaline protease secretion protein aprE [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 301

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 111/270 (41%), Gaps = 10/270 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N    ++   LL I G    + W+ + P++ +VSSSG ++   +   ++    G + +  
Sbjct: 35  NDARPIRWGWLLLIFGFGAFMAWATMAPLDAAVSSSGTVVVSGSRKLVQPLTGGKVSEIL 94

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLE 128
           V +G+Q+  G  L+  +D      +D+ +         +  ++ E+     ++    +LE
Sbjct: 95  VRDGAQVQAGQVLVRLDDTSARAQLDIVRGQWLVAMATQARLEAEQRGRASIDFPPALLE 154

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              ++R  +++    +   +  ++ +  + S+  +L+    +++     +   E +S +L
Sbjct: 155 LGEDTRVVEVMALQSRLLESRRQLRSNELQSMEAALRGLEYQVQGQEAAKYSKETQSRML 214

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R       ++L   K+L +     +N +++QER+       + E+++      + I E  
Sbjct: 215 R-------EELRNQKSLADDGFYPRNRVSEQERLFASIQGGVAEDLNSAGKTRQAIAEGR 267

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMS 278
                      K+I   L   QR  A    
Sbjct: 268 ARIAARQQEQRKDIESQLSDVQREAASLED 297


>gi|170076540|ref|YP_001733179.1| HlyD family secreted protein [Synechococcus sp. PCC 7002]
 gi|169887402|gb|ACB01110.1| HlyD family secreted protein [Synechococcus sp. PCC 7002]
          Length = 532

 Score =  154 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 82/520 (15%), Positives = 174/520 (33%), Gaps = 108/520 (20%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R  P   + +  + +   +  + W+ +  IE  V+++G++  +  V EI+SP +G++K+ 
Sbjct: 4   RQSPTLSRTIIWVILGVTVSTVAWAAIAKIEQVVTATGQLQPQKTVQEIQSPINGVVKEV 63

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-------------RCHIDTEKSAL 117
            VE+G Q+  G  LLTF+               ++L               +I   +  L
Sbjct: 64  FVEDGDQVEAGELLLTFDSDAAAASQKSLSAIKQSLLQENQLYRAILSNTANIQALQQQL 123

Query: 118 DFLNNKYDVLEKAFE--SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
             +N   +V   A    S   +      +     S +     + V  + +   +R+ +  
Sbjct: 124 TRINLPSEVRALALNRLSLISETQVLRAQIGENNSPLSASQAARVSAAQRETQSRVMASQ 183

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK--------------------------- 208
           L    L+ + +  R+ L++ +  LT+ + +                              
Sbjct: 184 LELEQLQQRLAQTRSQLANARTQLTIDQQMLADIRDRNQQTLTQAKESLDIETKILNRVQ 243

Query: 209 -----NAVSQNDLNQQERIVYKSTLELRENIH----EQKNMLRHI--------------- 244
                 A+    + +Q + V     +L E       E+K   + I               
Sbjct: 244 NPELAGAIPALQIERQRQQVGDRQAQLIEQRSSGEIERKQQQQQIDNRRAEIDQLLREEQ 303

Query: 245 ------------------------NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                                    E  D A    A    E+++ + +N +  ++  S+L
Sbjct: 304 RLQLDIRQANAELTNAESSVERSQREQVDGAQQRLAAIDSELNKMIVENSKRLSEVESQL 363

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHSKLTYIRAKVTPKQ 338
             + +T + + + +PIAGT+   Q+       +    +PL+KIVP          VT + 
Sbjct: 364 AQVNETLKYQGVTAPIAGTVFDLQA-GPRFVPRAGQAEPLLKIVP-DDALVAEVFVTNRD 421

Query: 339 IQHV----KKGYT------ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           I  V    +          A +R   +   +    +  +  +       D       YY 
Sbjct: 422 IGFVLERFQAKQKTTRPVSADIRIDSFPFSKFGDIEGEVISVGSDALPPDE---IYPYYR 478

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKN-TTLAQEII 427
             + I+    S + + L++G    V    +   ++   + 
Sbjct: 479 FPVGISLEEQSLDGLPLQSGMSVSVNIKIQEKRSVLSLLT 518


>gi|75908615|ref|YP_322911.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75702340|gb|ABA22016.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 467

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/433 (12%), Positives = 137/433 (31%), Gaps = 22/433 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
             + L  I+ +   I  S  +   + + +   +        ++    G I+   V     
Sbjct: 27  SLLGLFLIVSVGSAIALSSWIKYNVVIKAGATVRPIGETRLVQPEIEGTIQNLFVTENQV 86

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  + T    +        + +I+ ++  +    + +   N++     K  E     
Sbjct: 87  VKRGDAIATLNTEQLQIKQSQLQGNIQQIKLQLVQVDAQISTFNSQILAETKVIERTVAS 146

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
               L +      +      S    S       +  +  ++ DL   ++           
Sbjct: 147 AQADLARNQREYQERQITTQSEYIASEASLQKAIADLRKSQADLNFANADRDRYQQLADI 206

Query: 198 DLTMMKNLFEKNAV---SQNDLNQQERIVYKSTLELRE-------NIHEQKNMLRHINEL 247
                +   +K  V   +++ L   +R V  +  +++        ++         I + 
Sbjct: 207 GAIGRREYEQKKLVVEQAKSALEAGKRSVEIAQAKMQSARAGVNPSMATVAIAQERIAQE 266

Query: 248 YDEANLEFANYLKEISRDLE---QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                   A   KE    ++   +          +L  +EK  +   I +   G I+   
Sbjct: 267 IARGEATIATLQKEQQALVQRRLEMLSQLNQSQKELQQVEKQLQSSVIRATSDGIILKLN 326

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +     + S+ + +I P +    I+A +    I+ V+ G    +R             
Sbjct: 327 LRNPGQVVRTSEAIAEIAPQNAPLVIKAMIPTADIKKVEVGKKVQLRVNACPYPDYGVLH 386

Query: 365 AIIEKIDPIISQQDNNLQTQ-------EYYEVILKITDLAFSDNNIE--LRNGFPAEVLF 415
           A++  + P      NN            Y+E  ++   ++F + + +  +++G  AE   
Sbjct: 387 AVVSAVSPDAIAPQNNNPGGALSAAATPYFEATIQPEKISFGNGDRQCHIQSGMQAEAHI 446

Query: 416 TAKNTTLAQEIIH 428
            ++  T  + I+ 
Sbjct: 447 ISQEETALRFILR 459


>gi|213583136|ref|ZP_03364962.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 319

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 51/310 (16%), Positives = 114/310 (36%), Gaps = 6/310 (1%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +   E  L  L    S  +K     I  V+  ++ K  +  S+      L+ K S     
Sbjct: 1   DKENESGLITLDGTRSLSNKEVKANIELVHSQIRAKELKKTSLDSEISGLQEKLSSKEKE 60

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+   +++ ++  L +K      +   +++   K   E+ +           I  + ++ 
Sbjct: 61  LALLAEEINILSPLVKKGISPYTNFLNKKQAYIKVKSEINDIESSITLKKDDIELVVNDI 120

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ--SFSSS 309
                     +S+ + +N +      S L ++EK   ++ I SP+ G I      + +  
Sbjct: 121 EALNNELRLSLSKIISKNLQELEVVNSTLKVIEKQINEEDIYSPVDGVIYKINKSATTHG 180

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              Q +  L +I P  +      K+ PK    +       +        + K + A I+ 
Sbjct: 181 GVIQAADLLFEIKPKVRTMLADVKILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDN 240

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIH 428
           I P   +++     Q YY+VI+       +++++  L+ G   +        ++ + ++ 
Sbjct: 241 ISPDSYEENTGGTIQRYYKVIIAFD---VNEDDLRWLKPGMTVDASVITGKHSIMEYLLS 297

Query: 429 PITDNWPKIF 438
           P+     K F
Sbjct: 298 PLMKGVDKAF 307


>gi|168206420|ref|ZP_02632425.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium perfringens E str. JGS1987]
 gi|170662088|gb|EDT14771.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium perfringens E str. JGS1987]
          Length = 505

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 74/494 (14%), Positives = 167/494 (33%), Gaps = 78/494 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  + P     + +  +I +I   +TWS     EI V   G +  ++ +  I +   G
Sbjct: 15  RQVMESKPNKFIMIFIYILIAVIATFLTWSWFSEKEIIVKVQGVVRPDNEIHSISNILQG 74

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +K  +++NG +I +G  L   +    +  +  KK  I     ++D +   L+ LN   +
Sbjct: 75  EVKSVKMKNGEEIKKGDILFEID----SSELQDKKNQIDEQINYLDKDNKNLEKLNKSIN 130

Query: 126 VLEKAFESREEQL----------------LDFLGKYHSTCSKVFN--------------- 154
                FE+ +E+                 L+       + +++ N               
Sbjct: 131 ENTNYFENNDEEKEYYYKFKSYEAGNKVSLEEKNNISDSKNELLNEKANLEILSKSISEN 190

Query: 155 -----------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                          S   S +M L +   +  ++  L  +       +     +   ++
Sbjct: 191 KNYTEKGSVYSAQYDSYISSREMILNKTEQLKSSKDSLNKEIESNNKEIEGLNSENNTIE 250

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELREN-----------IHEQKNMLRHINELYDEAN 252
           NL EK  V      Q    V +  LE++ N           I + K  +  IN+  ++ +
Sbjct: 251 NLEEKKLVFDEKNKQLNNQVEQIALEIKNNNEQLEKLKSDTIAQIKGNIDKINQSINKLD 310

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSK---------------LTILEKTREQKTILSPIA 297
              ++  + ++   ++N+ T   ++ +                  +E++ E+  + +PI 
Sbjct: 311 SNISSLEESVNISKDKNKTTVLAQIEEKMNLNIQKKKELEENKKQIEQSIEKCIVKAPID 370

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +  N +       Q    +  I+P S    +   +  K I ++K G      F     
Sbjct: 371 GKLNVNINLEQGVVLQTGAMVANIIPDSDTYKVDLMIPTKDIANIKDGEEIKYSFEALPY 430

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVL 414
                    +E I P    + +N +   ++     +   +   N  E   ++ G   E  
Sbjct: 431 REYGFLDGKVENISPDS--KIDNEKGIAFFVGEGSLNSNSLYSNKGEESFIKPGMMCEAR 488

Query: 415 FTAKNTTLAQEIIH 428
              +   +   ++ 
Sbjct: 489 IITRKEKMLYYLLE 502


>gi|17232640|ref|NP_489188.1| hypothetical protein alr5148 [Nostoc sp. PCC 7120]
 gi|17134286|dbj|BAB76847.1| alr5148 [Nostoc sp. PCC 7120]
          Length = 467

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/433 (12%), Positives = 137/433 (31%), Gaps = 22/433 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
             + L  ++ +   I  S  +   + + ++  +        ++    G I+   V     
Sbjct: 27  SLLGLFLVVSVGSAIALSSWIKYNVVIKAAATVRPIGETRLVQPEIEGTIQNLLVTENQV 86

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  + T    +        + +I+ ++  +    + +   N++     K  E     
Sbjct: 87  VKRGDAIATLNTEQLQIKQSQLQGNIQQIKLQLVQIDAQISTFNSQILAETKVIERTVAS 146

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
               L +      +      S    S       +  +  ++ DL   ++           
Sbjct: 147 AQADLVRNQREYQERQITTQSEYIASEASLQKAIADLRKSQADLNFANADRDRYQQLADI 206

Query: 198 DLTMMKNLFEKNAV---SQNDLNQQERIVYKSTLELRE-------NIHEQKNMLRHINEL 247
                +   +K  V   +++ L   +R V  +  +++        ++         I + 
Sbjct: 207 GAIGRREYEQKKLVVEQAKSALEAGKRSVEIAQAKMQSAKAGVNPSMATVAIAQERIAQE 266

Query: 248 YDEANLEFANYLKEISRDLE---QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                   A   KE    ++   +          +L  +EK  +   I +   G I+   
Sbjct: 267 VARGEATIATLQKEQQALVQRRLEMLSQLNQSQKELQQVEKQLQSSVIRATSDGIILKLN 326

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +     + S+ + +I P +    ++A +    I+ V  G    +R             
Sbjct: 327 LRNPGQVVRTSEAIAEIAPQNAPLVVKAMIPTADIKKVAVGKKVQLRVNACPYPDYGVLH 386

Query: 365 AIIEKIDPIISQQDNNLQTQ-------EYYEVILKITDLAFSDNNIE--LRNGFPAEVLF 415
           A++  + P      NN            Y+E  ++   LAF + + +  +++G  AE   
Sbjct: 387 AVVSAVSPDAIAPQNNNPGGALSAAATPYFEATIQPEKLAFGNGDRQCHIQSGMQAEAHI 446

Query: 416 TAKNTTLAQEIIH 428
            ++  T  + I+ 
Sbjct: 447 ISQEETALRFILR 459


>gi|304557737|gb|ADM40401.1| Type I secretion membrane fusion protein HlyD [Edwardsiella tarda
           FL6-60]
          Length = 411

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 75/424 (17%), Positives = 154/424 (36%), Gaps = 27/424 (6%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S K M LL ++ ++       +  I+I    +G I    + + I SP SG I KF ++ G
Sbjct: 7   SRKLMILLGVMLVLVFYI--CIAKIDIVTPGTGVITGAADKLVIVSPDSGFINKFDLKTG 64

Query: 76  SQILQGTPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           S + QG  L ++ ++E       ++   +       +++ ++  L  + +     EK F 
Sbjct: 65  SLVKQGDILFSYTNLEVFHQEKTLNELVLFADTRIHNLEEDQRLLKMILDGNVSKEKGFS 124

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           S+   +           ++ F     S+         R + +   + DL ++  LL+   
Sbjct: 125 SQNTSIPVQELSAFKLLNEYF-----SLKNEEDNLKLREQKMLEEKDDLNHRVLLLKRKG 179

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              +                + ++   +  V +   ++        ++   +    +   
Sbjct: 180 GLLRSAK-----------APEIEIINNQSEVSQIISQITSGDISLLSLQNDMKAASNRFR 228

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN-QSFSSSNY 311
                 L   S  L+  +R   + + +L +L       +++SPI G ++   ++F   +Y
Sbjct: 229 SSVLEQLNNNSDQLQVLRRERLENIGRLELLRSKIIANSVVSPINGVVLSIERNFDKGSY 288

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            + SQP+M I  +++   I AK+  K    +    +  +                I KI 
Sbjct: 289 VENSQPVMTIKKNNENKVIDAKILSKYRPFIYADASVKIVINSPGYKN--NINGHIAKIS 346

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
                 D     + YY+V +K  D A     +E   G    V   +K  TL   +   + 
Sbjct: 347 ADSFSDDEARGGERYYKVEIKPDDKAVVPPELE---GVQVNVYALSKKITLLNYMTALVG 403

Query: 432 DNWP 435
           DN  
Sbjct: 404 DNIT 407


>gi|254441734|ref|ZP_05055227.1| hypothetical protein OA307_1149 [Octadecabacter antarcticus 307]
 gi|198251812|gb|EDY76127.1| hypothetical protein OA307_1149 [Octadecabacter antarcticus 307]
          Length = 207

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 71/188 (37%), Gaps = 9/188 (4%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            K   E+        + L   NE+   A L+ A+   ++   L       A     L + 
Sbjct: 27  NKLLHEVSHARKSNSDALNQYNEIVTRAELDRASEYSDVLSAL-------ATLRQDLRVA 79

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E    + TI SP+ G +            +  + + +I+P     ++ A+V+P  I HV 
Sbjct: 80  EDRLTRTTITSPMRGVVNNLGVTRIGGVIRPGEMIFQIIPLDDELFVEAEVSPSNIAHVI 139

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT--DLAFSDN 401
            G  AT++   Y  +       +++ I     + D +     +Y V L++   +L     
Sbjct: 140 PGQAATIKLSAYDFMIYGSLTGVVQLISADTFEDDRDPNAAPHYRVTLRLDTAELGTRQA 199

Query: 402 NIELRNGF 409
            IE+R   
Sbjct: 200 QIEIRPSM 207


>gi|167588370|ref|ZP_02380758.1| ABC antibiotic efflux pump, membrane fusion protein, HlyD subfamily
           [Burkholderia ubonensis Bu]
          Length = 419

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 62/398 (15%), Positives = 140/398 (35%), Gaps = 57/398 (14%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
              G+++    V+ +  P +G +++ +V  G ++  G PL+T      T L D +++   
Sbjct: 58  RVMGQLVPSAGVLNVSPPVTGTVERIEVREGQRVRAGDPLITVSAEVATSLGDAREMVRT 117

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L    +  +S L                             S  + +    I  +    
Sbjct: 118 QLETQRERLRSDL-----------------------------SGQTVLAEEAIRGLKDRA 148

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                ++R + +       +  L R+ L    + L+MM+    +   S + ++QQE  V 
Sbjct: 149 ATLERQLRELQMQHTHRVRQVELARSQL----EKLSMMRT---QGYASNSQVDQQEASVL 201

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEISRDLEQNQRTFADEMSKLT 281
            +   L++++  Q ++   + +   +   +         E+ R L + ++   +  ++ +
Sbjct: 202 DAEARLQDSVRAQLDVQGQLIQARQQLREQPLNARQQRNEMGRKLAETEQAIVENEARRS 261

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +         + +P  G +V    F         Q    ++P       +  V  + I  
Sbjct: 262 V--------VLRAPADG-VVGAILFKVGQIINAGQTAASVLPADGRLEAQLMVPSRAIGF 312

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQE-----YYEVILKIT 394
           +  G T  +R+  Y   +  +    +  I    +  Q+   L  Q      +Y + + + 
Sbjct: 313 IHPGQTVVLRYEAYPYQKFGQQYGRVSGISRSALSPQEVATLTGQPNVQEQHYRLTVALD 372

Query: 395 --DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             D+A  D    LR G   +        TL + ++ PI
Sbjct: 373 RQDIAVYDRTERLRPGMALDADLLLDRRTLIEWVLEPI 410


>gi|75812516|ref|YP_320135.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75705272|gb|ABA24946.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 500

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 61/467 (13%), Positives = 147/467 (31%), Gaps = 56/467 (11%)

Query: 17  LKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             R+    ++G++G+    + L     +V + G +     +  +++  +G +KK  V   
Sbjct: 27  WTRLGGFFLVGVVGMAVSVAALTRYHQTVKAPGTVRPTGELRIVQTAIAGTVKKTFVREN 86

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE--- 132
             + QG  L+  +D +        + +I+  +  +    + +  L+ +     +  E   
Sbjct: 87  QLVNQGESLVILDDTQLQTKKSQLQGNIQKSQQQLHQINAQILALDQQITTENQRGERVI 146

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           S  +  L+   + ++      +        +LK+    ++    +   ++       A  
Sbjct: 147 SSAKAELNLTQREYADKQIAVSSEWQEAEANLKIAQNELQRSQADLKSIQANLKSAEAAY 206

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN------------- 239
            +        + + +  ++SQN L + +    +    L       ++             
Sbjct: 207 QAAIVKHDRYQIIAQSGSISQNQLEEVQLAATQQAQVLESQKAAVESQKQVIQQKQQALT 266

Query: 240 ----------------------MLRHINELYDEANLEFANYLKEISRDLE---QNQRTFA 274
                                     I           A   +E    L+   + Q T  
Sbjct: 267 AAVANRVKASSALNPSDAVMTIAQEKIATEQASKQNNLARLRQEKESLLQRQTEIQDTIN 326

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           +   +L  +    ++  I +   G I   +  +     +  Q + +I P++K   I+A+V
Sbjct: 327 NTKKELKQILADIQKTIIRASATGNIFKLELRNPGQVVELGQAIAQIAPNNKPLIIKARV 386

Query: 335 TPKQIQHVKK-----------GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
               I  V+            G    ++F  Y        K  + +I        NN   
Sbjct: 387 ASADIGKVQICRLEKIADCQQG-KVNIQFSAYPYPDYGTLKGAVREITADAITTANNSSI 445

Query: 384 QEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIH 428
             YY+  ++        N+ +  ++ G        A+  TL   I+ 
Sbjct: 446 PAYYDATIEPEVNYLQKNSQKYHVQAGMEVTTDILAQEETLLTFILR 492


>gi|153941564|ref|YP_001393027.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium botulinum F str. Langeland]
 gi|152937444|gb|ABS42941.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium botulinum F str. Langeland]
 gi|295321003|gb|ADG01380.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium botulinum F str. 230613]
          Length = 476

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 68/458 (14%), Positives = 165/458 (36%), Gaps = 46/458 (10%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            + HP +   + +L +I     I W      EI V   G +   +N+ ++ +     +  
Sbjct: 20  SKPHPFTTIFIYILLLIFFSAFI-WCWFAEKEIVVDVQGVVRPNENIHKVSNLLGSKVSS 78

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
              +NG ++ +G  L T E  E    +D++K S+   +  ++ E S L+ L       + 
Sbjct: 79  VNFKNGDKVEKGKVLYTLEHKE----LDVQKSSLDKSKKDLEKEISNLEKLKKSILDNKN 134

Query: 130 AFESREEQ--------LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            F   +++          +   K      KV +  I ++   +    +  +S   N  DL
Sbjct: 135 YFTDSKDEKEYYNKYLNYEKSKKNPDNNKKVVDSQIDNLNSKINNLNSLKKSAQNNTNDL 194

Query: 182 EN------KSSLLRALLSSHQKDLTMMK---NLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +      +    +  +  ++K++  ++   N  +     +  +N  +  +  S LEL +
Sbjct: 195 NSGTSYYSQFKDYKINVEGYEKNIKALEDSYNSLKNKKAEEVLINDAKAKLESSRLELTK 254

Query: 233 NIHE----QKNMLRHINELYDEANLEFAN---------------YLKEISRDLEQNQRTF 273
             ++     +N++   N+   + N + ++                L EI   ++ N+   
Sbjct: 255 YKNQFTLNIENVIEECNDKIKDLNNQISSNDDAKEINEEKIKSSSLVEIDNSIKLNKEKL 314

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +  + L +++   ++ TI +PI G +  +    + +   + Q ++ I+P      I   
Sbjct: 315 EEITTNLKVVDMNIDKCTIKAPIDGIVDISTPIKTGDLVGEGQEVLNILPSESKYKIDLM 374

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +  K I ++K+G      F              +E I   +  + +      +Y     I
Sbjct: 375 ILNKDIANIKRGTNIKYDFQSLPYKEYGYLDGRLENIS--VDSKVDPKSGVSFYTGEASI 432

Query: 394 TDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                        ++++G         +   +   ++ 
Sbjct: 433 DSKPLYSHKGEKAQIKSGMVCTAKIITRKEKMLYYLLE 470


>gi|294677602|ref|YP_003578217.1| hemolysin D [Rhodobacter capsulatus SB 1003]
 gi|3128314|gb|AAC16166.1| potential secretion protein [Rhodobacter capsulatus SB 1003]
 gi|294476422|gb|ADE85810.1| secretion protein, HlyD family [Rhodobacter capsulatus SB 1003]
          Length = 438

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 45/404 (11%), Positives = 114/404 (28%), Gaps = 22/404 (5%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
            L +++ V++ G++   +  + ++   S  +    V  G  ++ G  L   +  +    +
Sbjct: 50  FLRVDVVVTAPGQLAAAEPPLMLRPAASTRLDALLVRPGDVVVAGQLLARLDPTQPEADL 109

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              +     L   I    + L                 E  +L   G   +  + V    
Sbjct: 110 AALEAERDALSARIARLTAEL-----------------EGGVLAETGPALAAEADVLTER 152

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                   +     + S            + LR  LS  ++   M   L E+ + SQ  +
Sbjct: 153 RLESRTKAEALQAEIASAEALIEAETRDGAGLREQLSILREVEAMRNTLAERQSGSQLAV 212

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
                +  ++  + R +      +    +    E  +   +  +  S  L +        
Sbjct: 213 LDARLMRLRAEADQRAHESRLAELRDRRDRAIAEHRMFLTSLKRTASEQLAEAGPRLQVV 272

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
             ++      RE   +++P  G ++        +      P++ +VP          +  
Sbjct: 273 EEQIAKARALREMADLVAPRPGVVLRVAEGGVGSLIPAGNPVVVLVPTDVPLLAEIGLRS 332

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
                V  G   +++   +      +    + ++     +     + Q      + +   
Sbjct: 333 TDAGRVVAGDPVSIKIDAFPWREHGQLTGSLTEVGHASYRAQGASEAQH--PAHVALDPA 390

Query: 397 AFSDN---NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           A  +N      L  G            ++      PI     + 
Sbjct: 391 AVLENLPPAATLLPGMTLSAEIHTGTRSVLSTFFEPILRGLAEA 434


>gi|284052750|ref|ZP_06382960.1| secretion protein HlyD [Arthrospira platensis str. Paraca]
          Length = 578

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 72/521 (13%), Positives = 175/521 (33%), Gaps = 94/521 (18%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVE---- 58
           F  K L    P    R  L  +I  + +   W +L  ++ + S+ G +  +   ++    
Sbjct: 48  FATKELLDALPQRWTRGLLYFLIVFVAIALPWGMLSQVDETGSARGRLEPQGGTIKQKLN 107

Query: 59  ------IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
                 + +  +  ++   +E G  +  G  L+  + +   + I   ++  ++    ++T
Sbjct: 108 LAYTSAVLNSQTAKVEMLNIEEGDIVKAGDILMELDSLPIRERIIQLQLQQQSKENRLNT 167

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLL-----------------DFLGKYHSTCSKVFNY 155
            K   + L  +    E+  +S++ + L                 +   +   T       
Sbjct: 168 LKQQKNQLETELLTQERQNQSQQLEKLSQVEQARRNLQSLKTTYNLQEQEKLTQVHQAEQ 227

Query: 156 GISSVYRSLKMK----LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            ++++ R L ++    L ++R       D +   +L         +++   +NL +   V
Sbjct: 228 NLAALRRILNLQREENLAQIRQAKRQLQDSKTAYTLAEMRWQKAIREVERYQNLSDDGVV 287

Query: 212 SQNDLNQQE--------------RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++  + +QE                + ++ L L E     + ++   +   ++A L  A 
Sbjct: 288 TEVRVIEQEDIKEERQRIWEQSQADIEQARLRLEEQESSYERIIHQADADIEQAELRLAE 347

Query: 258 YLK-------EISRDLEQNQRTFADEMSK------------------------------- 279
             +       +   D++Q +   A++ S                                
Sbjct: 348 QRRSYERVIHQAQADIQQAELRLAEQESSSQTILHSGELAVSKIKEQLKTLDGQIINLQS 407

Query: 280 --------LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                   +  L    E++ + +   GTI         +  QQ   +++I P      ++
Sbjct: 408 EIAQGDKDIESLNFELEKRVVRAQEGGTIFSLPISGVGDVVQQGGMIVEIAPQDANILLK 467

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A++   Q   ++KG    ++F  Y           + KI P    Q+ +      YE+ +
Sbjct: 468 AEMATTQSGSLQKGMAVKMKFDAYPFQDYGVVDGSLIKISPTTKMQETSQGRVAIYELEI 527

Query: 392 KITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           ++    +    + I+LR G  A      +   +   I+ P 
Sbjct: 528 ELNKTCIPSGKDCIQLRPGDTATAEVVVRQRRVIDFILDPF 568


>gi|167645480|ref|YP_001683143.1| HlyD family secretion protein [Caulobacter sp. K31]
 gi|167347910|gb|ABZ70645.1| putative HlyD family secretion protein [Caulobacter sp. K31]
          Length = 227

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 69/216 (31%), Gaps = 1/216 (0%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            +++ E+ +     +L     E+      +  +  +       + +E+   L + Q    
Sbjct: 2   KVSELEQTIVGMRQDLAIRRDERSKAEAAVAGVDQQIAKARGEFSREVRGALTEAQANRR 61

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
               +LT          + +P  G I   Q  +     + + PLM + P      I A+V
Sbjct: 62  LRGEELTKASDKAGLTVLTAPEDGVIQQMQVHTLGGVVKPADPLMVLAPRGGELIIEARV 121

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             +    V +G +  ++   Y   R      +IE I     Q +          V L   
Sbjct: 122 QNRDAGFVHEGQSVEIKLEAYPFTRYGVVHGVIEHIGRDAVQDEKEGLVFP-AMVKLTQP 180

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +      + L  G  A V        +   ++ P+
Sbjct: 181 WITVEGRRVPLAPGLAATVEIKTGERRIIGFLLSPL 216


>gi|186686164|ref|YP_001869360.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186468616|gb|ACC84417.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 502

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 69/450 (15%), Positives = 147/450 (32%), Gaps = 45/450 (10%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           + +   +  I  + +L   ++V     I     +  ++S  +G ++   ++    + QG 
Sbjct: 46  ILLTTFVAAIALTSILSYNVTVKVPASIRPVGELRVVQSAMAGTVQNIDIQENQVVAQGQ 105

Query: 83  PLLTFEDIETTDLIDLKKVSIKN---LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            +   ++          + SI+     +  I+ +   +D        L        +  L
Sbjct: 106 AIAQIDNSRLQTQKSQLENSIQQGKLQQSQINAQLGEIDTQIAAQTNLTNRTLIAAQAEL 165

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D   + +          ++    +L +   +   +   ++ L        A L   +   
Sbjct: 166 DGTQRNYQDQQIKAAADMTQAQAALILAKVQRDRLLREKV-LRATVQEAEAALQVAKVQR 224

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML------------------ 241
             ++ +    +VS+N   ++E+ V  +  +L E     KN+L                  
Sbjct: 225 DRLQPIVASGSVSRNLFEEKEQAVISAQAKLEEAKVTAKNLLEDKEQALNIAQTNLEKAK 284

Query: 242 --------------RHINELYDEANLEFANYLKEISRDLEQN---QRTFADEMSKLTILE 284
                           I +         A   KE    L+Q    Q+  A     L  ++
Sbjct: 285 TAINASNATVIVASERIKQERARGEATLAALKKERETLLQQRLELQKQLASSSKDLQQVQ 344

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
                  I SPIAGT++     +     Q S+ + +I P +    ++A+V  + I  VK 
Sbjct: 345 TDLNLSVIRSPIAGTLLQLNLRNPGQVVQPSEAIAQIAPLNASLLLKARVPAQDIDKVKA 404

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----EYYEVILKITD--LAF 398
           G    ++            K  ++ + P      NN  +       YEV ++     L+ 
Sbjct: 405 GQKVQMQVSACPYPDYGTLKGTVKTVAPDALPVKNNGNSGVAQIVAYEVTIEPQTSYLSR 464

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            D    L+ G        ++  T+ Q I+ 
Sbjct: 465 GDRQCHLKAGMEGRADIISRRETVLQFILR 494


>gi|254430762|ref|ZP_05044465.1| putative transporter component [Cyanobium sp. PCC 7001]
 gi|197625215|gb|EDY37774.1| putative transporter component [Cyanobium sp. PCC 7001]
          Length = 388

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 70/437 (16%), Positives = 139/437 (31%), Gaps = 84/437 (19%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +       L R    ++IG  G  + W  L   +  V + G++    +V  ++ P  G
Sbjct: 28  EAMALQQSRFLARTITWTLIGTTGFALAWLALAKTDEVVIAPGKLQPIGDVQTVQMPVGG 87

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++    V+                       + ++V    +   +D E +          
Sbjct: 88  VLDTMLVK-----------------------EGQQVKKGEVLLRLDNETTL--------- 115

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                                          I +    L +K   +R  YL+  D E + 
Sbjct: 116 ----------------------DRRNSLRESIRAKEEQLSLKRLELRR-YLSLNDTEQQV 152

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             L   L+  ++ L  + +L E  AV +    QQ   V +   EL+            ++
Sbjct: 153 --LTRNLNLEKQILERLASLQEVGAVPELQYLQQRNQVREVEGELQ---------KVQVD 201

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               +A LE +         + + Q   +D  SKLT L+     + I SP+ G +   + 
Sbjct: 202 RFRQKAILEQS---------VAELQSELSDLRSKLTELKVNIRYQDIRSPVDGIVFDLKP 252

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
             +   AQ S+P+MKIVP       + ++    I  V+ G    +    +        + 
Sbjct: 253 TGTGFVAQGSEPVMKIVPF-SALEAKVEIDSSDIGFVRVGKPVDISIDSFPATDFGVVEG 311

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTL 422
            +  I       ++   T  +    +++            + L+ G         +  T 
Sbjct: 312 TLSSIGSDALPPEDQKPTYRF-PATIQLNSQQLKLKSGQQLPLQVGMSLTANIKLRKVTY 370

Query: 423 AQEI---IHPITDNWPK 436
            Q +       TD+  +
Sbjct: 371 LQLLLGEFKSKTDSLKR 387


>gi|302873064|ref|YP_003841697.1| secretion protein HlyD family protein [Clostridium cellulovorans
           743B]
 gi|307688780|ref|ZP_07631226.1| secretion protein HlyD family protein [Clostridium cellulovorans
           743B]
 gi|302575921|gb|ADL49933.1| secretion protein HlyD family protein [Clostridium cellulovorans
           743B]
          Length = 486

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 74/471 (15%), Positives = 152/471 (32%), Gaps = 54/471 (11%)

Query: 7   KNLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + + +  P    R M  + I  +  ++TWS     +I+V S G +  ++ + ++ S  +G
Sbjct: 15  REILQAKPRGFSRYMMYIIIALLAAILTWSCFAKKQITVKSQGIVRPQEEIFKVASGTTG 74

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK----SALDFLN 121
           II    ++ G ++ +G  L++    E +   +  + S+K+    +        S LD +N
Sbjct: 75  IITSMNLKEGMEVKKGDVLVSVNGEEISLEKNALEKSLKDKNAELSANNKLKSSVLDGVN 134

Query: 122 -------------NKYDVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                         KYD+  K  ES   E   ++             N  + SV      
Sbjct: 135 HLNAADPVEGEYSKKYDLYAKNLESGNTEANSVEVQKNSLQETINDLNTLLKSVEEE-HN 193

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-QERIVYK 225
              +   +Y    D E      R  +   Q ++   +       +S+  L++ Q+     
Sbjct: 194 YFDQAHYMYYQYEDYEISLKAYREQIQKDQNNINTYQGTL-NTLISKGTLDEAQQAKKES 252

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN---------------- 269
               ++            I +L +   L   N + E    L++                 
Sbjct: 253 LEANIQTLKDRIDATNLEITKLKNSQRLTIRNRISEAQSKLKETTAISSSNSYKEQYISN 312

Query: 270 --------QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
                   +   ++    L +        TI +   G I  + +F   +  Q    L KI
Sbjct: 313 LDSTIASLETAISELKLNLDLASAKVAATTIKAEYDGVINLSNAFKVGDVVQPGTELAKI 372

Query: 322 VP-HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +P  +    +   +       + +G    + F           K+ +  I         N
Sbjct: 373 IPKDNSEFVVDTYIENVSFGEISEGKDVIIEFMALPQSEYGVVKSKLTNISTDA---KVN 429

Query: 381 LQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIH 428
            Q   YY     I     +  +   +++RNG   +V    +  T  +  + 
Sbjct: 430 EQQGSYYTATCSIPTTFMTKKDGTKVDIRNGMLVQVRIINREVTYMRYFLE 480


>gi|291566012|dbj|BAI88284.1| HlyD family secretion protein [Arthrospira platensis NIES-39]
          Length = 578

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/521 (13%), Positives = 175/521 (33%), Gaps = 94/521 (18%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVE---- 58
           F  K L    P    R  L  +I  + +   W +L  ++ + S+ G +  +   ++    
Sbjct: 48  FATKELLDALPQRWTRGLLYFLIVFVAIALPWGMLSQVDETGSARGRLEPQGGTIKQKLN 107

Query: 59  ------IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
                 + +  +  ++   +E G  +  G  L+  + +   + I   ++  ++    ++T
Sbjct: 108 LAYTSAVLNSQTAKVEMLNIEEGDIVKAGDILMELDSLPIRERIIQLQLQQQSKENRLNT 167

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLL-----------------DFLGKYHSTCSKVFNY 155
            +   + L  +    E+  +S++ + L                 +   +   T       
Sbjct: 168 LEQQKNQLETELLTQERQNQSQQLEKLSQVEQARRNLQSLKTTYNLQEQEKLTQVHQAEQ 227

Query: 156 GISSVYRSLKMK----LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            ++++ R L ++    L ++R       D +   +L         +++   +NL +   V
Sbjct: 228 NLAALRRILNLQREENLAQIRQAKRQLQDSKTAYTLAEMRWQKAIREVERYQNLSDDGVV 287

Query: 212 SQNDLNQQE--------------RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++  + +QE                + ++ L L E     + ++   +   ++A L  A 
Sbjct: 288 TEVRVIEQEDIKEERQRIWEQSQADIEQARLRLEEQESSYERIIHQADADIEQAELRLAE 347

Query: 258 YLK-------EISRDLEQNQRTFADEMSK------------------------------- 279
             +       +   D++Q +   A++ S                                
Sbjct: 348 QRRSYERVIHQAQADIQQAELRLAEQESSSQTILHSGELAVSKIKEQLKTLDGQIINLQS 407

Query: 280 --------LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                   +  L    E++ + +   GTI         +  QQ   +++I P      ++
Sbjct: 408 EIAQGDKDIESLNFELEKRVVRAQEGGTIFSLPISGVGDVVQQGGMIVEIAPQDANILLK 467

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A++   Q   ++KG    ++F  Y           + KI P    Q+ +      YE+ +
Sbjct: 468 AEMATTQSGSLQKGMAVKMKFDAYPFQDYGVVDGSLIKISPTTKMQETSQGRVAIYELEI 527

Query: 392 KITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           ++    +    + I+LR G  A      +   +   I+ P 
Sbjct: 528 ELNKTCIPSGKDCIQLRPGDTATAEVVVRQRRVIDFILDPF 568


>gi|292490959|ref|YP_003526398.1| secretion protein HlyD [Nitrosococcus halophilus Nc4]
 gi|291579554|gb|ADE14011.1| secretion protein HlyD family protein [Nitrosococcus halophilus
           Nc4]
          Length = 458

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 65/457 (14%), Positives = 141/457 (30%), Gaps = 47/457 (10%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H      +  + P+ L   T+  ++ ++   I WS +   ++ V++ G +  +       
Sbjct: 18  HSTEGIAILTSEPSRLMGATIGVLVALLLAGIIWSFVGRADVIVTTHGSLSPDSEARRFY 77

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P  G I    +  G  +L+G  L               + +   L   +   +   ++ 
Sbjct: 78  APIGGEIVDIYMAEGQPVLKGDVLARLNARGA------IEAATNALDAELKLAEIEREYK 131

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                  +     + E L   +        K  + G+  +  + K +L   R        
Sbjct: 132 AWPER--KNLRMRQAEALKKQIAIAEERHQKRVSEGLRKLAEAQKARLEEARGTLDKAA- 188

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTLELRENIHEQ 237
                      L   +++    K LF       VS+N + +++     +    R    + 
Sbjct: 189 ---------RQLEIAKREWEKYKRLFNNPGGGGVSKNQVEEKKSDYLSAATNYRVAKAQF 239

Query: 238 KNMLRHINELYDEANLEFANYLKEI-------SRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   ++  Y +A  E     +E+          L+  +R     + KL       E  
Sbjct: 240 GKLDYELSNEYSQAKSELEGSDQELIKLRIEYEALLDDIKREENRLLIKLRGARLAAEAA 299

Query: 291 T--------------ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
           +              IL+P++G I         +  Q + PL  I P      ++ ++  
Sbjct: 300 SRIKFENIDEDNFLRILAPVSGVITEVTYTQIGDKVQANTPLGAIAPEESRAILKIEIPE 359

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           +    +++G     +F  +   R       +E I P       +      Y   + +   
Sbjct: 360 QDRGFLEEGLPVKAKFSAFPYQRYGAIDGTLEYISPAAKPSSQDKNL--VYTGHIGLEKT 417

Query: 397 --AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             +  D +  LR G  A      +   L    + P  
Sbjct: 418 YFSIEDVDYPLRYGMTATAEIVVRERRLIDLALDPFR 454


>gi|307944845|ref|ZP_07660183.1| HlyD family type I secretion membrane fusion protein [Roseibium sp.
           TrichSKD4]
 gi|307772059|gb|EFO31282.1| HlyD family type I secretion membrane fusion protein [Roseibium sp.
           TrichSKD4]
          Length = 205

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 70/203 (34%), Gaps = 4/203 (1%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           H+   +   ++E+    +     +  E   +     R   +    LT +     +  + +
Sbjct: 3   HQIPQIEAELSEIMRRKSELALKFRSEAEAEKIDALRAIDELNQTLTAMSDRNLRSEVRA 62

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           PI G +      +     +  Q L+++VP      I   ++PK    V  G  A V+   
Sbjct: 63  PIDGKVHRLFQTTIGGVVRSGQNLVQLVPTDAPISIDISLSPKDRAKVWVGLPAVVKLSA 122

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           Y        +A +  I   I Q +       +Y V L+     F ++   +  G  AEV 
Sbjct: 123 YDYSLHGGLEAKVVDISTDILQSEEE---DPHYWVKLEANTSTFGEDK-PILAGMAAEVD 178

Query: 415 FTAKNTTLAQEIIHPITDNWPKI 437
                 T+   ++ PI     K 
Sbjct: 179 IIIGKRTILDFLLTPIRAVQEKA 201


>gi|168212021|ref|ZP_02637646.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium perfringens B str. ATCC 3626]
 gi|170710046|gb|EDT22228.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium perfringens B str. ATCC 3626]
          Length = 509

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 71/490 (14%), Positives = 157/490 (32%), Gaps = 70/490 (14%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  + P     + +  +I II   +TW+     EI V   G +  ++ +  I +   G
Sbjct: 15  RQIMESKPNKFIMIFVYILIAIIATFLTWAWFSEKEIIVKVQGVVRPDNEIQSISNIVQG 74

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL------------------- 106
            +K  +++NG +I +G  L   +  E  D  +     I  L                   
Sbjct: 75  EVKSVKMKNGEEIKKGDILFEIDSSELQDKKNQINDQIDYLDKDNKNLEKLNKSINENTN 134

Query: 107 ---------------RCHIDTEKSALDFLNNKYDVLEKAFESREE----QLLDFLGKYHS 147
                          + +    K +L+  NN  D  ++    +             K ++
Sbjct: 135 YFKNNDEEKEYYYKFKSYEAGNKVSLEEKNNISDSKKELLNEKANLETFNKSINENKNYN 194

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +++    S   S KM L ++  +  ++  L N+       +     +  +++NL E
Sbjct: 195 EKGSLYSAQYDSYISSRKMILNKIEQLKNSKDSLNNEIESNNKEIEGLNSENNIIENLEE 254

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF------------ 255
           K +V      Q    V +  LE++ N  + + +         E   +             
Sbjct: 255 KKSVIIEKNKQLNNQVEQIDLEIKNNNEQLEKLKSDTIAQTKENIEKINQNINKLNNNIS 314

Query: 256 --------------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                            L +I   +  N +   +       +E++ E+  + SP+ G + 
Sbjct: 315 SLDESENISIDKNKTTILAQIEEKMNLNIQKKKELEENKNQIEQSIEKCIVKSPVDGKLN 374

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
            N +       Q    +  I+P+S    +   +  K I ++K        F         
Sbjct: 375 VNINLEQGVILQTGAMIASIIPNSNTYKVDLMIPTKDIANIKDSEEIKYSFEALPYREYG 434

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAK 418
                +E I P    + +N +   ++     +   +   N  E   +++G   E     +
Sbjct: 435 FLDGKVESISPDS--KIDNEKGIAFFVGEGSLNSNSLYSNKGEESFIKSGMRCEARIITR 492

Query: 419 NTTLAQEIIH 428
              +   ++ 
Sbjct: 493 KEKMLYYLLE 502


>gi|254412230|ref|ZP_05026005.1| auxiliary transport protein, MFP family, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196181196|gb|EDX76185.1| auxiliary transport protein, MFP family, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 498

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 60/471 (12%), Positives = 149/471 (31%), Gaps = 59/471 (12%)

Query: 16  SLKRMTLLSIIGIIG----LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            + R + L  + I+G     I  + +    I+V ++  +     +  +++   G +    
Sbjct: 21  PISRWSTLGGLFIVGSMGVAIALASVFKYNITVKAAANVRPAGELRLVQATTEGQVTGIF 80

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN----KYDVL 127
           V+    + QG  + T +D          + SI+  +  +    + +  +++    + D +
Sbjct: 81  VKENQSVNQGDVIATIDDSRLQTQKRNVQSSIQQAQLQLTQINAQIRAIDSHSLAETDRI 140

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +A  S E +L      Y           ++    ++++    ++   +     +   + 
Sbjct: 141 NRAVTSAEAELTRRRRDYQDQQITT-TADVAEAEANVRLSQEELQKAQVQLQSAQADLNS 199

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL----------------- 230
             A L++ Q      + + E  A+SQN L + +  V +    +                 
Sbjct: 200 TIAALNAAQAKFKRYQPIAEFGALSQNQLEEAKLAVTQQQQAVKSQQAAVEVQKQTIEQQ 259

Query: 231 ---------------------RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
                                + ++   +  +     + D            + +     
Sbjct: 260 YQTVAAAKARLKRALATLNPTQADVAIAQQRIPQEKAIGDATLATLTRERDALIQQRIDM 319

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPHSKL 327
           Q+    +   L   E    Q  I +P  G +      +SS   +  + + ++   P +  
Sbjct: 320 QKQLERDTHSLKQAEIDLSQTLIKAPTDGILFKLNLRNSSQTVRPGEEIAQLAPTPSNTT 379

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDN 379
             ++A V  + I  VK    A +R              ++  I P              N
Sbjct: 380 LVVKALVAAQDIGKVKTNQKAQLRISACPYPDYGTLNGVVSTISPDAITPPGNEAAIASN 439

Query: 380 NLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIH 428
             +   ++EV +K   L+    N    ++ G        ++  T+ Q ++ 
Sbjct: 440 PTRNSAFFEVTIKPETLSLRQGNNYCPIQLGMEGTADIISRQETVIQFLLR 490


>gi|212692459|ref|ZP_03300587.1| hypothetical protein BACDOR_01955 [Bacteroides dorei DSM 17855]
 gi|212665038|gb|EEB25610.1| hypothetical protein BACDOR_01955 [Bacteroides dorei DSM 17855]
          Length = 388

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 73/424 (17%), Positives = 133/424 (31%), Gaps = 72/424 (16%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            H A  + +  + +  +  ++     + ++ISV  SG +       EIKS  + +I    
Sbjct: 18  QHTAKSQIIYWIVLAAVTAVMIALPFIYVDISVQGSGVVRPVTEKTEIKSSITELIDSVY 77

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  LL F    +   I+ +   + +   H+    S L +L           
Sbjct: 78  VREGDQVNKGDVLLRFRTNNSDYKINYQTNRLNDYEAHL----SDLAYLAKGECPARFHS 133

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             R+++   F+                                         K   L   
Sbjct: 134 PVRQQEYTYFIK----------------------------------------KQKELETS 153

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+  +K+    KNLF+K  +S+ + ++          EL   I  Q              
Sbjct: 154 LAQAEKEYKRNKNLFDKKVISEEEYDKYYFQYQSRQNELASLIQSQ-------------- 199

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                  L     DL   + + ++  + L    K +E   + SPI+GTI         + 
Sbjct: 200 -------LSTWQADLNTYRNSRSEMNTTLKQELKDKELYIVRSPISGTIDQFSGIYRGSS 252

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  Q L  I P      +   VTP+ I  +  G    V+   +           + +I 
Sbjct: 253 IQAGQSLAVISP-DSTLCMEIYVTPRNIGFMSLGMPVNVQVESFNYNEWGTLPGKVTEIS 311

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIH 428
                     Q   +Y+V  ++        + +   L+ G      F     +L   +  
Sbjct: 312 SDFLTDS---QGNSFYKVKCQMERNYLMLKSGQKGILKKGMTVSAHFMITRRSLFDLLYQ 368

Query: 429 PITD 432
            I D
Sbjct: 369 KIDD 372


>gi|300869599|ref|ZP_07114179.1| Secretion protein HlyD [Oscillatoria sp. PCC 6506]
 gi|300332377|emb|CBN59379.1| Secretion protein HlyD [Oscillatoria sp. PCC 6506]
          Length = 499

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 60/463 (12%), Positives = 139/463 (30%), Gaps = 53/463 (11%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
              LL    +   +  +  L   ++V +   +     +  +++   G I   +V+   ++
Sbjct: 29  LGGLLQAAAVGIALVLAATLKYNVTVRAPATVRPTGEIRIVQASSEGTIGSIKVKENQRV 88

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  +   ED+   +     + +++ L        + +  L  +               
Sbjct: 89  NKGDVIAIVEDLRLQNEKKQLQGNLQQLERQFTQFDAQILALERQKIAETDRMNRTVASA 148

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL---ENKSSLLRALLSSH 195
           L  L +            ++ V  +     +  + +   + DL   E     + A L + 
Sbjct: 149 LAELKRSQREHEDRQENSVAEVEEAEANLRSEQKELQRFQADLKSGEANLKSVEAALKTA 208

Query: 196 QKDLTMMKNLFEKNAVSQND----------------------------LNQQERIVYKST 227
                  + + E  A+SQ+                             + +Q++++    
Sbjct: 209 VSKRDRYEPIAETGALSQDQFEEAKLAVEQQAQAVAAQKGAIEAQKQAILRQQQVMEAVA 268

Query: 228 LELRENIH---------EQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEM 277
             L+                       +   EA L   N  +E   +   +  +    + 
Sbjct: 269 ARLQRTKTALNPSSAEVAIAQQRMAAEKATGEATLAALNREREALIQQRVEISKQQQRDR 328

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           S++  +E    Q  I + + GT++  +  +     Q    + +I P      I  +V  +
Sbjct: 329 SQIRQIEADLTQTAIRATVNGTVLKLELRNPGQVVQLGDAIAQIAPDRTPIAIVTRVATQ 388

Query: 338 QIQHVKKGYTATV----------RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
            I  V+    A V          R   Y        K  + +I P      N  ++  YY
Sbjct: 389 DISKVQICQEAKVENCQQGKVQLRISAYPYPDYGTLKGAVREISPDAIAPTNGDKSTGYY 448

Query: 388 EVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           +V ++         +    L+ G        AK  T+   ++ 
Sbjct: 449 QVKIEAEKTYLVREEQQYPLQTGMEVTADIIAKEETILTFVLR 491


>gi|81299941|ref|YP_400149.1| hypothetical protein Synpcc7942_1132 [Synechococcus elongatus PCC
           7942]
 gi|81168822|gb|ABB57162.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 567

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 61/418 (14%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
            +  ++G IG I  +  L  ++ V +   I        +++   G +++  V +  ++ Q
Sbjct: 190 GISLVLGFIGTIILTSFLKYKVVVKAPALIRPIGETRLVQAAVEGKVRQIAVRSNQEVQQ 249

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G P++  +D +                                         ++ +QL+D
Sbjct: 250 GDPIIVIDDSQQ---------------------------------------ITKRDQLID 270

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            + K      ++ +   +     L       R I +N+ D++       A L+    + +
Sbjct: 271 SIAKNQLKLQQIESQKAAIAEEMLAESNKVARGIDVNQADIQTA----EANLALAADEYS 326

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             + L    A++  DL  QE++        + N+   + +     E              
Sbjct: 327 RYQTLSNAGAIA--DLLVQEKLASFRVA--QANLSRARELTAQTEEQGLATQARLRQMQD 382

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           ++++   +  +    E  +L  +        + +PI+G I      +        Q + +
Sbjct: 383 QLAQQESETLQQIKVEQKELQQMNINLANTVVRAPISGIIQSINLRNPDQVVGVGQEVAR 442

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS----- 375
           I P      I+A V  + I  V  G    +R               ++ I P        
Sbjct: 443 IFPTQSGLTIKALVPSQNILPVALGQRVQLRIAACPYPDFGTLDGKVQAIAPDSGGSSSS 502

Query: 376 ---QQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIH 428
                +      + YEV +K  D + +D     ++R G  AE        T+ + ++ 
Sbjct: 503 AAQTNEPVAANSQAYEVTIKPEDRSLTDGQRVCKIRPGMDAEADIITNEETVLKFMLR 560


>gi|168178640|ref|ZP_02613304.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium botulinum NCTC 2916]
 gi|182670547|gb|EDT82521.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium botulinum NCTC 2916]
          Length = 476

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 69/458 (15%), Positives = 166/458 (36%), Gaps = 46/458 (10%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            + HP +   + +L +I +   I W  L   EI V   G +   +N+ ++ +     +  
Sbjct: 20  SKPHPFTTIFIYILLLIFLSAFI-WCWLAEKEIVVDVQGVVRPNENIHKVSNLLGSKVSS 78

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
              +NG ++ +G  L T E  E    +D+++ S+   +  ++ E S L+ L       + 
Sbjct: 79  VNFKNGDKVEKGKVLYTLEHKE----LDVQRSSLDKSKKDLEKEISNLEKLKKSISDNKN 134

Query: 130 AFESREEQ--------LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            F   +++          +   K      KV N  I ++   +    +  +S   N   L
Sbjct: 135 YFTDSKDEKEFYNKYLNYEKSKKNPENNKKVVNSQIDNLNSKINNLNSLKKSAQNNTNYL 194

Query: 182 EN------KSSLLRALLSSHQKDLTMMK---NLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +      +    +  +  ++K++  ++   N  +     +  +N  +  +  + LEL +
Sbjct: 195 SSGTSYYSQFKDYKINVEGYEKNIKALEDSYNSLKNKKAEEVLINDAKAKLESAKLELTK 254

Query: 233 NIHE----QKNMLRHINELYDEANLEFAN---------------YLKEISRDLEQNQRTF 273
             ++     +N +   N+   + N + ++                L EI   ++ +++  
Sbjct: 255 YKNQFTLNIENAIEECNDKIKDLNNQMSSNDDAKEINEEKVKSSSLVEIDNSIKLSKQKL 314

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +  + L + +   E+ TI SPI G +  +    + +   + Q ++ I+P      I   
Sbjct: 315 EEIKTNLKVADMNIEKCTIKSPIDGIVDISTPIKTGDLVGEGQEVLNILPSESKYKIDLM 374

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +  K + ++KKG T    F              +E I   +  + +      +Y     I
Sbjct: 375 ILNKDVANIKKGTTIKYDFQSLPYKEYGYLNGRLENIS--VDSKVDPKSGVNFYTGEASI 432

Query: 394 TDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                        ++++G         +   +   ++ 
Sbjct: 433 DSKPLYSHKGEKAQIKSGMVCTAKIITRKEKMLYYLLE 470


>gi|324977004|ref|YP_004264007.1| secretion protein HlyD family protein [Bacteroides salanitronis DSM
           18170]
 gi|324320353|gb|ADY38242.1| secretion protein HlyD family protein [Bacteroides salanitronis DSM
           18170]
          Length = 389

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 65/418 (15%), Positives = 127/418 (30%), Gaps = 72/418 (17%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            H    + +  + ++ +   +     + ++ISV  SG +       EI S  + I+    
Sbjct: 18  QHTTKSQVIYWVVLLAVTVTLVALPFVYVDISVQGSGVVRPVAEKAEITSSITEIVDSVF 77

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G Q+ +G  +L F    +   I+ +   + +    +    + L FL         + 
Sbjct: 78  VKEGDQVNKGDVILRFRTNNSDYKINYQTSRLNDCSAQL----ADLAFLAKGERPERFSS 133

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             R+++   F+                                         K   L   
Sbjct: 134 PVRQQEYAYFIR----------------------------------------KKQELETA 153

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+  +K+ T  + LFEK  +S+ + +     +     EL   +  Q              
Sbjct: 154 LAQAEKEYTRNRTLFEKKVISEEEYDSYYFKLKSQQNELASLVQSQ-------------- 199

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                  L     D    + T+ +  S L    K ++   + SP+ GT+         + 
Sbjct: 200 -------LSTWQADQNTYRNTYNEMNSSLNQEIKDKDMYIVRSPVDGTVDQFSGVYRGSS 252

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  Q L  I P      +   VTP+ I  +  G    V+   +           ++ I 
Sbjct: 253 IQAGQSLAVISP-DSTLCLEVYVTPRNIGFMSVGMPVNVQVESFNYNEWGTIPGRVKDIS 311

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEI 426
                     Q   +Y+V  ++        N     L+ G      F     +L   +
Sbjct: 312 SDFLTDS---QGNSFYKVKCEMERDYLQLKNGRVGKLKKGMTVNAHFMVTRRSLFDLL 366


>gi|269137677|ref|YP_003294377.1| putative type I secretion membrane fusion protein, HlyD family
           [Edwardsiella tarda EIB202]
 gi|267983337|gb|ACY83166.1| putative type I secretion membrane fusion protein, HlyD family
           [Edwardsiella tarda EIB202]
          Length = 395

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 71/411 (17%), Positives = 149/411 (36%), Gaps = 25/411 (6%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           + L+ +  +  I+I    +G I    + + I SP SG I KF ++ GS + QG  L ++ 
Sbjct: 2   LVLVFYICIAKIDIVTPGTGVITGAADKLVIVSPDSGFINKFDLKTGSLVKQGDILFSYT 61

Query: 89  DIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           ++E       ++   +       +++ ++  L  + +     EK F S+   +       
Sbjct: 62  NLEVFHQEKTLNELVLFADTRIHNLEEDQRLLKMILDGNVSKEKGFSSQNTSIPVQELSA 121

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               ++ F     S+         R + +   + DL ++  LL+      +         
Sbjct: 122 FKLLNEYF-----SLKNEEDNLKLREQKMLEEKDDLNHRVLLLKRKGGLLRSAK------ 170

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
                  + ++   +  V +   ++        ++   +    +         L   S  
Sbjct: 171 -----APEIEIINNQSEVSQIISQITSGDISLLSLQNDMKAASNRFRSSVLEQLNNNSDQ 225

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN-QSFSSSNYAQQSQPLMKIVPH 324
           L+  +R   + + +L +L       +++SPI G ++   ++F   +Y + SQP+M I  +
Sbjct: 226 LQVLRRERLENIGRLELLRSKIIANSVVSPINGVVLSIERNFDKGSYVENSQPVMTIKKN 285

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           ++   I AK+  K    +    +  +                I KI       D     +
Sbjct: 286 NENKVIDAKILSKYRPFIYADASVKIVINSPGYKN--NINGHIAKISADSFSDDEARGGE 343

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
            YY+V +K  D A     +E   G    V   +K  TL   +   + DN  
Sbjct: 344 RYYKVEIKPDDKAVVPPELE---GVQVNVYALSKKITLLNYMTALVGDNIT 391


>gi|56750426|ref|YP_171127.1| hypothetical protein syc0417_d [Synechococcus elongatus PCC 6301]
 gi|56685385|dbj|BAD78607.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 567

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 61/418 (14%), Positives = 136/418 (32%), Gaps = 57/418 (13%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
            +  ++G IG I  +  L  ++ V +   I        +++   G +++  V +  ++ Q
Sbjct: 190 GISLVLGFIGTIILTSFLKYKVVVKAPALIRPIGETRLVQAAVEGKVRQIAVRSNQEVQQ 249

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G P++  +D +                                         ++ +QL+D
Sbjct: 250 GDPIIVIDDSQQ---------------------------------------ITKRDQLID 270

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            + K      ++ +   +     L       R I +N+ D++       A L+    + +
Sbjct: 271 SIAKNQLKLQQIESQKAAIAEEMLAESNKVARGIDVNQADIQTA----EANLALAADEYS 326

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             + L    A++  DL  QE++        + N+   + +     E              
Sbjct: 327 RYQTLSNAGAIA--DLLVQEKLASFRVA--QANLSRARELTAQTEEQGLATQARLRQMQD 382

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           ++++   +  +    E  +L  +        + +PI+G I      +        Q + +
Sbjct: 383 QLAQQESETLQQIKVEQKELQQMNINLANTVVRAPISGIIQSINLRNPDQVVGVGQEVAR 442

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS----- 375
           I P      I+A V  + I  V  G    +R               ++ I P        
Sbjct: 443 IFPTQSGLTIKALVPSQNILPVALGQRVQLRIAACPYPDFGTLDGKVQAIAPDSGGSSSS 502

Query: 376 ---QQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIH 428
                +      + YEV +K  D + +D     ++R G  AE        T+ + ++ 
Sbjct: 503 AAQTNEPVAANSQAYEVTIKPEDRSLTDGQRVCKIRPGMDAEADIITNEETVLKFMLR 560


>gi|170758743|ref|YP_001785821.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium botulinum A3 str. Loch Maree]
 gi|169405732|gb|ACA54143.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium botulinum A3 str. Loch Maree]
          Length = 476

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 71/458 (15%), Positives = 166/458 (36%), Gaps = 46/458 (10%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            + HP +   + +L +I +    TW      EI V   G +   +N+ ++ +     +  
Sbjct: 20  SKPHPFTTIFIYILLLIFLSAF-TWCWFAEKEIVVDVQGVVRPNENIHKVSNLLGSKVSS 78

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
              +NG ++ +G  L T E  E    +D+++ S+   +  ++ E S L+ L       + 
Sbjct: 79  VNFKNGDKVEKGKVLYTLEHKE----LDVQRSSLDKSKKDLEKEISNLEKLKKSISDNKN 134

Query: 130 AFESR--EEQLLDFLGKYHSTCS------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            F     E++  D    Y  +        KV N  I ++   +       +S   N   L
Sbjct: 135 YFIDGKGEKEYYDKYLNYQKSKKDPDNNKKVVNSQIDNLNSKINNLNLLKKSAQNNTNHL 194

Query: 182 EN------KSSLLRALLSSHQKDLTMMK---NLFEKNAVSQNDLNQQERIVYKSTLEL-- 230
            +      +    +  +  ++K++  ++   N  +     +  +N  +  +  + LEL  
Sbjct: 195 NSGTSYYSQFKDYKINIEDYEKNIRALEDSYNSLKNKKAEEVLINDAKAKLESARLELTK 254

Query: 231 --RENIHEQKNMLRHINELYDEANLEFA--NYLKEISRD-------------LEQNQRTF 273
              + I   ++ +   N+   + N + +  +  KEIS +             ++ ++   
Sbjct: 255 YKNQFILNIESAIEEYNDKIKDLNNQVSSNDDAKEISEEKIKSSSLVEIDNSIKLSKEKL 314

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +  + L +++   E+ TI +PI G +  +    + +   + Q ++ I+P      I   
Sbjct: 315 EEIKTNLKVVDMNIEKCTIKAPIDGIVDISTPIKTGDLVGEGQEVLNILPSESKYKIDLM 374

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +  K I ++KK  T    F              +E I   +  + +      +Y     I
Sbjct: 375 ILNKDIANIKKSTTIKYDFQSLPYKEYGYLDGRLENIS--VDSKVDPKSGVSFYTGEASI 432

Query: 394 TDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                        ++++G    V    +   +   ++ 
Sbjct: 433 DSKPLYSHKGEKAQIKSGMVCTVKIITRKEKMLYYLLE 470


>gi|192360227|ref|YP_001982001.1| putative membrane-fusion protein [Cellvibrio japonicus Ueda107]
 gi|190686392|gb|ACE84070.1| putative membrane-fusion protein [Cellvibrio japonicus Ueda107]
          Length = 434

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 69/426 (16%), Positives = 140/426 (32%), Gaps = 54/426 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWS---ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           S   + L  ++ +  +  W         E  V   G +     V+ +    +G IKK  V
Sbjct: 45  SHSLIVLFLLVWVAVVFLWLISNSYARKETVV---GWLEPSAGVIRVYPEDTGTIKKVLV 101

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  + +  PLL                                       D +     
Sbjct: 102 SEGDFVEKNQPLLIING-----------------------------------DRILTDGG 126

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           + EE LL+      S  ++      +      K+   ++ +     L L+ + ++L    
Sbjct: 127 NMEENLLNEYDVQKSLVNEQLARSNTIYKSQAKIINEKIHAAESELLMLKEQMTMLSRKH 186

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +     +  M  L +   +S  D       V    L +R +IH           L ++  
Sbjct: 187 ALISNQVERMSVLKKDGHISGYDYE----SVLSQELAVRIDIHNLTISKISKENLIEQMQ 242

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNY 311
            E    L E    ++Q +   +D   K+  L   R+   I SP AG I   Q+       
Sbjct: 243 SESNFLLYENQNRIDQLKEKLSDITQKIAQL-NGRKSYVIKSPRAGVINNLQAIEGQKAV 301

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +  + PL+ ++P          V  + I  V+ G    + +  +   R   ++ +I+ + 
Sbjct: 302 SGSAIPLLTLIPEEAKLIAHLLVPVRAIGFVEPGQNLEIAYDAFPYQRFGLYRGVIDSVS 361

Query: 372 PIISQQDNNLQ-----TQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             +   +  L      ++  Y+V   ++  D++    ++ L++G       +    +L  
Sbjct: 362 STLMLPNEVLNVPYGLSEPVYKVTAHIQKQDISAYGKSLSLKSGMTLNAKISTGERSLIH 421

Query: 425 EIIHPI 430
            +  PI
Sbjct: 422 WLFDPI 427


>gi|33865492|ref|NP_897051.1| leukotoxin secretion protein [Synechococcus sp. WH 8102]
 gi|33632661|emb|CAE07473.1| similar to leukotoxin secretion protein [Synechococcus sp. WH 8102]
          Length = 386

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/431 (15%), Positives = 141/431 (32%), Gaps = 87/431 (20%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R  P   K +    I        +++   I+  V + GE+        +K+PF G+IK  
Sbjct: 28  RPAPLWSKALAWTIISTASLGFIFAVFAKIDEVVLAPGELQPLGAERPVKAPFGGVIKDI 87

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
             + G ++  G  LL                                       DV  K 
Sbjct: 88  VAKEGQKVNAGDTLLR-----------------------------------FDADVSRKR 112

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            E+ E Q+     ++                          R++   +  +  + + +  
Sbjct: 113 KETLETQIKLERKRFEEES----------------------RAVEARKRGVVERLNGINR 150

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L++     T +  L E  A+   +L +Q   V +   E +    + + +   +N+L  E
Sbjct: 151 SLNTESSIYTNIIPLAEIGAMQLTELLRQRNKVEQLESEAQVVKADLEEVEAQLNKLKQE 210

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           +                   R  ++   ++  ++ T  ++ + +PIAG +      S+  
Sbjct: 211 S------------------LREISELERQMVEVQDTITKEKLSAPIAGIVYGMIPSSAGY 252

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKV--TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            A   + L+K+VP  +   I AK+  T + +  +K G  A +R   +   +       ++
Sbjct: 253 AASAGETLVKVVPGGE---IEAKIYITNQDVGFMKPGMKAQIRVDAFPYTQFGSITGSLK 309

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEI 426
            +  +  +  +       +   +KI       +    E+  G   +V    ++  +   +
Sbjct: 310 SVGTLPLE-PDQQNPMPRFPAYVKIDKDYLEKDGEKYEISAGQSVQVNLILRDKRVISLL 368

Query: 427 IHPITDNWPKI 437
               TD   K 
Sbjct: 369 ----TDAVQKA 375


>gi|237724308|ref|ZP_04554789.1| secretion protein HlyD family protein [Bacteroides sp. D4]
 gi|229437177|gb|EEO47254.1| secretion protein HlyD family protein [Bacteroides dorei 5_1_36/D4]
          Length = 388

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 72/424 (16%), Positives = 131/424 (30%), Gaps = 72/424 (16%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            H    + +  + +  +   +     + ++ISV  SG +       EIKS  + +I    
Sbjct: 18  QHTTKSQIIYWIVLAAVTAAMIALPFIYVDISVQGSGVVRPVTEKTEIKSSITELIDSVY 77

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  LL F    +   I+ +   + +   H+    S L +L           
Sbjct: 78  VREGDQVNKGDVLLRFRTNNSDYKINYQTNRLNDYEAHL----SDLAYLAKGECPAGFHS 133

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             R+++   F+                                         K   L   
Sbjct: 134 PVRQQEYTYFIK----------------------------------------KKEELETS 153

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+  +K+    KNLF+K  +S+ + ++          EL   I  Q              
Sbjct: 154 LAQAEKEYKRNKNLFDKKVISEEEYDKYYFQYQSRQNELASLIQSQ-------------- 199

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                  L     DL   + + ++  + L    K +E   + SPI+GTI         + 
Sbjct: 200 -------LSTWQADLNTYRNSRSEMNTTLKQELKDKELYIVRSPISGTIDQFSGIYRGSS 252

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  Q L  I P      +   VTP+ I  +  G    V+   +           + +I 
Sbjct: 253 IQAGQSLAVISP-DSTLCMEIYVTPRNIGFMSLGMPVNVQVESFNYNEWGTLPGKVTEIS 311

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIH 428
                     Q   +Y+V  ++        + +   L+ G      F     +L   +  
Sbjct: 312 SDFLTDS---QGNSFYKVKCQMERNYLMLKSGQKGILKKGMTVSAHFMITRRSLFDLLYQ 368

Query: 429 PITD 432
            I D
Sbjct: 369 KIDD 372


>gi|237711340|ref|ZP_04541821.1| secretion protein HlyD family protein [Bacteroides sp. 9_1_42FAA]
 gi|265752752|ref|ZP_06088321.1| secretion protein HlyD family protein [Bacteroides sp. 3_1_33FAA]
 gi|229454035|gb|EEO59756.1| secretion protein HlyD family protein [Bacteroides sp. 9_1_42FAA]
 gi|263235938|gb|EEZ21433.1| secretion protein HlyD family protein [Bacteroides sp. 3_1_33FAA]
          Length = 388

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 72/424 (16%), Positives = 131/424 (30%), Gaps = 72/424 (16%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            H    + +  + +  +   +     + ++ISV  SG +       EIKS  + +I    
Sbjct: 18  QHTTKSQIIYWVVLAAVTAAMIALPFIYVDISVQGSGVVRPITEKTEIKSSITELIDSVY 77

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  LL F    +   I+ +   + +   H+    S L +L           
Sbjct: 78  VREGDQVNKGDVLLRFRTNNSDYKINYQTNRLNDYEAHL----SDLAYLAKGECPAGFHS 133

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             R+++   F+                                         K   L   
Sbjct: 134 PVRQQEYTYFIK----------------------------------------KKEELETS 153

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+  +K+    KNLF+K  +S+ + ++          EL   I  Q              
Sbjct: 154 LAQAEKEYKRNKNLFDKKVISEEEYDKYYFQYQSRQNELASLIQSQ-------------- 199

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                  L     DL   + + ++  + L    K +E   + SPI+GTI         + 
Sbjct: 200 -------LSTWQADLNTYRNSRSEMNTTLKQELKDKELYIVRSPISGTIDQFSGIYRGSS 252

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  Q L  I P      +   VTP+ I  +  G    V+   +           + +I 
Sbjct: 253 IQAGQSLAVISP-DSTLCMEIYVTPRNIGFMSLGMPVNVQVESFNYNEWGTLPGKVTEIS 311

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIH 428
                     Q   +Y+V  ++        + +   L+ G      F     +L   +  
Sbjct: 312 SDFLTDS---QGNSFYKVKCQMERNYLMLKSGQKGILKKGMTVSAHFMITRRSLFDLLYQ 368

Query: 429 PITD 432
            I D
Sbjct: 369 KIDD 372


>gi|302873718|ref|YP_003842351.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium cellulovorans 743B]
 gi|307690049|ref|ZP_07632495.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium cellulovorans 743B]
 gi|302576575|gb|ADL50587.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium cellulovorans 743B]
          Length = 487

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 77/472 (16%), Positives = 169/472 (35%), Gaps = 55/472 (11%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + + +  P    R  +  II ++  +ITWS     +I+V S G +  ++ + ++ S  +G
Sbjct: 15  REIMQARPKGFSRYMMYIIIALLATVITWSCFAKKQITVKSQGVVRPQEEIFKVASGTAG 74

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK----SALDFLN 121
           I+    ++ G ++ +G  LL     E T   +  + ++++ +  +        S LD +N
Sbjct: 75  IVTSLNMKEGMEVKKGDVLLVVNGQELTLQKNALEKNLQDKQAELSVNNKLKTSILDGVN 134

Query: 122 -------------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
                         KY++ +K  ES   Q+     + +S    +    ++++ +S++ + 
Sbjct: 135 HLNASDDVEGEYYKKYELYQKNLESGNAQVNSTEVQKNSIQDAI--NDLNTLLKSIEEEK 192

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
                 +      E+    L++     QKD T +   +EK+     +  Q ++ V     
Sbjct: 193 NYFNKAHYMYYQYEDYEITLKSYKDQIQKDQTTVNK-YEKDLNDLTNQGQLDQAVQMKKE 251

Query: 229 ELRENIHEQKNML----RHINELYDEANLEFANYLKEISRDLEQN--------------- 269
            L  NI   K+ +      I +L +   L   N + E    L++                
Sbjct: 252 SLEGNIKTIKDRIDSTNLEITKLKNNQRLTVRNKIAEYEIKLKETTAVSTSNSYKEQYIS 311

Query: 270 ---------QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                    +   ++    L +     E  TI +   G I  +      +  Q    L K
Sbjct: 312 QLDSTISSLENAISELKLNLDLAVAKVEATTIKAEYDGVINLSNELKVGDVVQNGTELAK 371

Query: 321 IVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           I+P +   ++    +       + +G    + F           KA +  I      + +
Sbjct: 372 IIPKNSSAFVADTYIQNSSFAEISEGKDVVIEFLALPQSEYGVLKAKLSNISTDA--KID 429

Query: 380 NLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIH 428
             Q   YY     I     +  +   ++++NG   +V   ++  T  +  + 
Sbjct: 430 QKQGNSYYTATCDIPVTTMTKKDGTQVDIKNGMLVQVRIISREITYMRYFLE 481


>gi|317967898|ref|ZP_07969288.1| transporter component [Synechococcus sp. CB0205]
          Length = 383

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/423 (13%), Positives = 144/423 (34%), Gaps = 80/423 (18%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L  + P   + +T   I G +  I W +L   E  V ++G++    +V +++ P  G+ K
Sbjct: 24  LVESSPFWPQTITWTLISGSLLGIAWLVLAQTEEVVVATGKLEPIGSVKDVQMPVQGVAK 83

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V+ G  + +G  L+  +                             +  ++K    E
Sbjct: 84  DILVKEGQMVKKGDVLIRLDT----------------------------EATSSKLKRSE 115

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            A   +E++L   + +   + +                                 + ++L
Sbjct: 116 DALRFKEQELALKVNELDRSVALG-----------------------------AREQAML 146

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L +  + +   ++L +   V +    +    V     ++          +  +++  
Sbjct: 147 KNRLDNSTEVMKRYESLAKVGGVGELQALEARTKVEDIVGQIS---------ISKVDDRR 197

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +  L+         + + + +   AD  S++   +     + I SP +G +   +  S+
Sbjct: 198 KQLILQ---------QQIRELKSQIADLRSQIIESQVILRYQLIRSPESGYVYDLKPKSA 248

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
              AQ S+P++KIVP   L   + ++   +I  V  G    V    Y  +       +++
Sbjct: 249 GFVAQGSEPVLKIVPAG-LLQAKVEIPSSKIGFVSVGKLVDVSIDSYPSVDFGVVHGLVK 307

Query: 369 KIDPIISQQDNNLQTQEY-YEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQ 424
           +I       +  +   +Y Y   + ++  +        + L+ G         +  +  Q
Sbjct: 308 RIGSDAIPPEPAMNKPDYRYPADISLSSQSLRLKDGKQLPLQVGMSLTANIKLRKVSYMQ 367

Query: 425 EII 427
            ++
Sbjct: 368 LLL 370


>gi|88811165|ref|ZP_01126421.1| Secretion protein HlyD [Nitrococcus mobilis Nb-231]
 gi|88791704|gb|EAR22815.1| Secretion protein HlyD [Nitrococcus mobilis Nb-231]
          Length = 461

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 64/409 (15%), Positives = 129/409 (31%), Gaps = 14/409 (3%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           WS +   ++ V + G +  +     I SP  G +    +  G  + +G  L   E ++  
Sbjct: 53  WSFIGHADVIVQAGGVLGPDGEERRIYSPVDGELVNIYLAEGMPVAKGDVLARVEAVDAI 112

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            L           +  +   +   D L ++  VLE+       Q+      +    ++  
Sbjct: 113 QLA----TQALQAKLKLTDAQQQHDLLPDRIRVLEQQLNLLRVQIDQAQRLHDKRVNQAI 168

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS-------HQKDLTMMKNLF 206
                     L     ++R           ++     L  S        Q+  T  +   
Sbjct: 169 AKLGEEQRIRLGKARAQLREAKNELDYARAEAEKYERLFRSPGGGGLSRQQVDTKRREYA 228

Query: 207 EKN---AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            K     +++ +L Q E  + K     +  + +    L  +   Y +  LE A    E  
Sbjct: 229 AKQTTYDLARAELAQFEVDLSKVYQSSQAEVQQTAEKLLSLRTQYAQKKLELATLENEGQ 288

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L   + T                   + +P+AG I         +    +QP+  I P
Sbjct: 289 LQLRIARATAEGAARVSFDDIDEENLLLVRAPVAGVITRLALTQPGDKVVAAQPIASIAP 348

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 ++  +   +   +++G  A ++FP +   R    +  +E I P  S    N Q 
Sbjct: 349 AGARPVLQVAIGETERAFLQEGMPAKLKFPAFPYQRYGLIEGTLEYISPTASANAQNKQP 408

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
                + L+    +  +  I LR G         +   L    + P+ +
Sbjct: 409 TYKGRIGLQRDSFSVGNTQIPLRYGMSGTAEIVVRKRRLIDLALDPLRE 457


>gi|323181121|gb|EFZ66655.1| hemolysin secretion protein D, plasmid [Escherichia coli 1180]
          Length = 318

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/311 (18%), Positives = 114/311 (36%), Gaps = 13/311 (4%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  I      +  EK+         + +++  E  E ++ DF G   +   + F   +SS
Sbjct: 5   ESDILKSEASLLYEKTEQYRYAILSESIQR-NELPEIRITDFPGGEDNAGGEHFQ-RVSS 62

Query: 160 VYRSLK---MKLTRMRSIYLNRLDLENKSSLLRALLSSHQ-----KDLTMMKNLFEKNAV 211
           + +            + + LN+  +E  ++L R  L  HQ     + L   K L  K AV
Sbjct: 63  LIKEQFMTWQNRKNQKQLTLNKKIVERDAALARVSLYEHQVSQEGRKLNDFKYLLNKKAV 122

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           SQ+ + +QE    ++  E    + +   + + I  + +E  LE   +  EI     ++  
Sbjct: 123 SQHSVMEQENSYIQAKNEHAVWLAQVSQLEKEIELVREELALETNIFRSEIIEKHRKSTD 182

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                  +L    + +    I +P++GT+      +       ++ LM IVP + +  + 
Sbjct: 183 NIVLLEHELEKNRQRKASSFIKAPVSGTVQELNIHTEGGVVTTAETLMIIVPDNDILEVT 242

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A V  K I  ++ G    ++   Y   R       ++ I        +       + VI+
Sbjct: 243 ASVLNKDIGFIQPGQEVIIKVDAYPYTRHGYLTGKVKNITADSVSVPDTGLV---FNVII 299

Query: 392 KITDLAFSDNN 402
            +         
Sbjct: 300 SVDRNDIQGER 310


>gi|282899221|ref|ZP_06307195.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
 gi|281195904|gb|EFA70827.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
          Length = 466

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/435 (14%), Positives = 129/435 (29%), Gaps = 21/435 (4%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
                  +  I  +   I  +  +   ++V     +     V  ++    G IK   V+ 
Sbjct: 24  RWTSLAGIFLIGTVTSAIALASWVKYNVTVKVDAVVRPIGEVRVVQPEVEGTIKSILVKP 83

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              +  G  +      +        + +I+     I    + +  L+ +     +  ++ 
Sbjct: 84  NQTVKIGDVIAYLNTDDLLIKKSQLQGNIQQGNLQISQVYAQIRILDRQILAETQVAQNA 143

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                  L +      +           +         S+   R DL             
Sbjct: 144 ITSARVDLLRNQREYQQQQVSTQGEFLAAQANWQKAKASLDKARADLSFAKMDKERYQEL 203

Query: 195 HQKDLTMMKNLFEKNAVSQN--DLNQQERI--------VYKSTLELRENIHEQKNMLRHI 244
            Q      + L +K    Q    +   ER         V  +   +             I
Sbjct: 204 SQIGAVGRRELEQKALTVQQTQSILDTERKSLEMAKIKVQSAQAAINPTPAAVMIAQERI 263

Query: 245 NELYDEANLEFANYLKEISRDLE---QNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
            +         A+  KE    +E   Q +      + +L  +E    +  IL+   G I+
Sbjct: 264 AQETARGVSNIASLNKEKQALIERRVQLETQIKQSIKELEQVENQMRKSMILATSNGIIL 323

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +     + S+ + +IVP S    IRA +  ++IQ+V  G    +R          
Sbjct: 324 KLNLRNPGQVIRPSESIAEIVPDSSDLLIRALIPTEEIQNVNIGQQVQLRVGACPYPDYG 383

Query: 362 KFKAIIEKIDPII------SQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEV 413
             + +++ I P +      +Q   N     Y+E  +K   L F     +  L++G   + 
Sbjct: 384 TLQGVVQTISPDVITNQSNNQGTTNRMGNGYFEATVKPASLQFGHGRYQCYLQSGMEVKA 443

Query: 414 LFTAKNTTLAQEIIH 428
              +K  T  + +  
Sbjct: 444 DIISKQETALEFMFR 458


>gi|241554126|ref|YP_002979339.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240863432|gb|ACS61094.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 387

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 62/420 (14%), Positives = 138/420 (32%), Gaps = 43/420 (10%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P        L    +I ++ +  +      V+++G I  +  V  +     G+I K  V 
Sbjct: 4   PMGWHVTGYLMAGILIVVLIFLSIASYSRIVTATGIIQPDKGVAVVMPSRPGVIMKMMVA 63

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +G Q+ +G  L+                                     + +    + ES
Sbjct: 64  DGDQVEEGQELV-----------------------------------AVRSEDYLVSGES 88

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             E++ + L + +++ S+      +           ++         L+++ +L + L++
Sbjct: 89  ASEKVAEMLDRQNASISEQLAEVKNDEIAQTAQFSAQISGYQTQIDKLQSQIALQKELIT 148

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           S +KD+  ++ L +K  V + D+  +E     S  E R+ +   ++ L        +A  
Sbjct: 149 SIEKDVERIRGLVDKGIVPRRDVTLRE----DSLTERRQQMAVLESTLTERRSDLSDAER 204

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                    +  +   Q    D    L   E++R    I SPI GT+    +        
Sbjct: 205 MLDQVKARSNEKVAALQSQREDINRGLATNEQSRAY-VIRSPIGGTVSALTA-KIGEPLN 262

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q LM +VP +   + +  V    +  V+ G    +    +           ++ +   
Sbjct: 263 TQQALMSVVPLNATLHAQLDVPNAAVGFVEVGQEVRLAIDTFPYQSFGTIAGRVKSLSKS 322

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
              + +   T   Y V + +   + +       L  G            +L + +  P+ 
Sbjct: 323 PINRGSGASTNLNYLVTVDLERQSITAFGKQQALFPGMTLSARIATARQSLLEWLFEPLF 382


>gi|221634582|ref|YP_002523270.1| secretion protein HlyD family protein [Rhodobacter sphaeroides
           KD131]
 gi|221163455|gb|ACM04417.1| secretion protein HlyD family protein [Rhodobacter sphaeroides
           KD131]
          Length = 432

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 51/397 (12%), Positives = 115/397 (28%), Gaps = 21/397 (5%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           PI++ VS++G I  +D    ++   + +++   V  G  +  G  L   +   +      
Sbjct: 49  PIDVVVSAAGRIAADDPAAVLRPVTAAVLRSLLVRPGDLVAPGQLLARLDSRTSDADAAQ 108

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            K     L   I   ++ L          ++A E          G+  S  +        
Sbjct: 109 LKAQAAALSARIARIEAELAGRPLAGAGPDRALE----------GRIQSGRAATETALRR 158

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +   L      + +    R  L    +  R  L + ++ L   +N      V +  L +
Sbjct: 159 GLEADLARIDRGIEAARAERPALAETLATARE-LEAMRERLMTTQNGTRAAFV-ETRLAR 216

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E    +     R N      +L+             ++  +++  +L   +   A    
Sbjct: 217 LEAEARQ-----RRNEATLDGLLQERAGAAARLAAFESDRRQKLLEELADLRPRRAVLAE 271

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           ++           + +P AG ++   +    +    + P+  I P     +    +  + 
Sbjct: 272 QIAETADLARLHELRAPGAGVVLSVAAGGPGSLMTPADPVAVIAPTGGGLHAELGLLSRD 331

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
              V+ G    V+   +        +  +  + P  +        Q    V+        
Sbjct: 332 AGLVRAGAPVRVKVDAFPWRHHGAIEGRLADVAPSSAVPPGGGPAQHAARVVFPPGPPLP 391

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
                    G        A   TL    + P+ +   
Sbjct: 392 EGL----MPGMTLTADILAGRRTLLSYFLDPLLEGLS 424


>gi|124021800|ref|YP_001016107.1| transporter component [Prochlorococcus marinus str. MIT 9303]
 gi|123962086|gb|ABM76842.1| possible transporter component [Prochlorococcus marinus str. MIT
           9303]
          Length = 391

 Score =  143 bits (360), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 140/418 (33%), Gaps = 81/418 (19%)

Query: 15  ASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
               R    S+IG     + W  +   E  V + G++    +V EI+ P  G+ +   ++
Sbjct: 37  RFWMRAVTWSLIGTTAFAVGWLAIARTEEIVVAQGKLEPLGDVKEIQIPVGGVARDILIK 96

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G                        +VS   +   +DTE                    
Sbjct: 97  GGD-----------------------RVSKGQILIQLDTE-------------------- 113

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                         T S+  N   +   +  +    ++            + +  R  L+
Sbjct: 114 --------------TSSEQVNSLEAQFTKKQQQLKLKLEEQQGTLALSREQVATTRDNLA 159

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q+ L+  + L  + A S+                      +Q+N +R +     +  L
Sbjct: 160 LEQQILSRFEFLSAQGASSELQYL------------------QQRNKVRELRGRVTKEKL 201

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + A     +++++EQ     A   ++LT  + T + +++ SP+ G +   +  +    AQ
Sbjct: 202 DGARQQSILNQEIEQLNAQLAQLKAQLTEAKVTLKYQSLRSPVDGVVFDLKPTTPGFVAQ 261

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            S+P++KIVP +       ++   +I  V++G +  +    +        +  +  I   
Sbjct: 262 SSEPVLKIVPFNN-LEADVEIPSNKIGFVREGMSVDISIDSFPATDFGVLEGKVTSIGSD 320

Query: 374 ISQQDNNLQTQEY-YEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEII 427
               D   Q QEY +   +++        N   + L+ G         ++ +  Q ++
Sbjct: 321 ALPPDQQKQRQEYRFPATIQLDSQQLKLKNGTTLPLQVGMSLTANIKLRSVSYLQLLL 378


>gi|126464809|ref|YP_001041785.1| secretion protein HlyD family protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126106624|gb|ABN79149.1| secretion protein HlyD family protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 432

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 51/397 (12%), Positives = 115/397 (28%), Gaps = 21/397 (5%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           PI++ VS++G I  +D    ++   + +++   V  G  +  G  L   +   +      
Sbjct: 49  PIDVVVSAAGRIAADDPAAVLRPVTAAVLRSLLVRPGDLVAPGQLLARLDSRTSDADAAQ 108

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            K     L   I   ++ L          ++A E          G+  S  +        
Sbjct: 109 LKAQAAALSARIARIEAELAGRPLAGAGPDRALE----------GRIQSGRAATETALRR 158

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +   L      + +    R  L    +  R  L + ++ L   +N      V +  L +
Sbjct: 159 GLEADLARIDRGIEAARAERPALAETLATARE-LEAMRERLMTTQNGTRAAFV-ETRLAR 216

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E    +     R N      +L+             ++  +++  +L   +   A    
Sbjct: 217 LEAEARQ-----RRNEATLDGLLQERAGAAARLAAFESDRRQKLLEELADLRPRRAVLAE 271

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           ++           + +P AG ++   +    +    + P+  I P     +    +  + 
Sbjct: 272 QIAETADLARLHELRAPGAGVVLSVAAGGPGSLMTPADPVAVIAPTGGGLHAELGLLSRD 331

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
              V+ G    V+   +        +  +  + P  +        Q    V+        
Sbjct: 332 AGLVRAGAPVRVKVDAFPWRHHGAIEGRLADVAPSSAVPPGGGPAQHAARVVFPPGPPLP 391

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
                    G        A   TL    + P+ +   
Sbjct: 392 EGL----MPGMTLTADILAGRRTLLSYFLDPLLEGLS 424


>gi|33864730|ref|NP_896289.1| leukotoxin secretion protein [Synechococcus sp. WH 8102]
 gi|33632253|emb|CAE06709.1| possible similar to leukotoxin secretion protein [Synechococcus sp.
           WH 8102]
          Length = 396

 Score =  142 bits (359), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 69/428 (16%), Positives = 139/428 (32%), Gaps = 91/428 (21%)

Query: 15  ASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
               +    ++IG       W  L   E  V + G++    +V +I+ P  G+  +  V+
Sbjct: 32  RFWMKTVTWTMIGTTVFGVAWLALARTEEIVVAPGQLEPVGSVQDIQMPVGGVADQILVQ 91

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L+                        +DTE S    L+     LEK  + 
Sbjct: 92  EGDAVKAGQVLMK-----------------------LDTEASEEQRLS-----LEKTIKL 123

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           ++EQL                  + +  +   +++               +  +L   L+
Sbjct: 124 KQEQL-----------------RLKAEEKQRYLQVNN------------EEVQMLENNLA 154

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              + L   + L E  A S+     Q+  V ++   L +   ++   L  +++   + N 
Sbjct: 155 LQSEILERFEELEEAGATSELQYLSQQNSVEETRGRLMQTKADRLRQLALLDQQVAQFNT 214

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E                   AD   +L     T   + + SP+ G +   +  ++   AQ
Sbjct: 215 E------------------VADLRGRLAQARVTLRYQQLKSPVDGVVFDLKPTATGFTAQ 256

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVK--KG--------YTATVRFPHYADIREKKF 363
            +Q +MK+VP+      + +V   +I  V    G          A +    Y        
Sbjct: 257 STQTVMKVVPYGS-LEAKVEVPSNKIGFVTVPPGCPKDLESCMKADISIDSYPSTDFGVL 315

Query: 364 KAIIEKIDPIISQQDNNLQTQE-YYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKN 419
           +  + +I       D   Q QE  + V +K+        +   + L+ G         + 
Sbjct: 316 EGKVTRIGSDALPPDPQEQRQELSFPVTVKLDQQKLQLKSGTTLPLQVGMSLTANIKLRK 375

Query: 420 TTLAQEII 427
            +  Q ++
Sbjct: 376 VSYLQLLL 383


>gi|332561305|ref|ZP_08415620.1| secretion protein HlyD family protein [Rhodobacter sphaeroides
           WS8N]
 gi|332274104|gb|EGJ19421.1| secretion protein HlyD family protein [Rhodobacter sphaeroides
           WS8N]
          Length = 432

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 51/397 (12%), Positives = 115/397 (28%), Gaps = 21/397 (5%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           PI++ VS++G I  +D    ++   + +++   V  G  +  G  L   +   +      
Sbjct: 49  PIDVVVSAAGRIAADDPAAVLRPVTAAVLRSLLVRPGDLVAPGQLLARLDSRTSDADAAQ 108

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            K     L   I   ++ L          ++A E          G+  S  +        
Sbjct: 109 LKAQAAALSARIARIEAELAGRPLAGAGPDRALE----------GRIQSGRAATETALRR 158

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +   L      + +    R  L    +  R  L + ++ L   +N      V +  L +
Sbjct: 159 GLEADLARIDRGIEAARAERPALAETLATARE-LEAMRERLMTTQNGTRAAFV-ETRLAR 216

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E    +     R N      +L+             ++  +++  +L   +   A    
Sbjct: 217 LEAEARQ-----RRNEATLDGLLQERAGAAARLAAFESDRRQKLLEELADLRPRRAVLAE 271

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           ++           + +P AG ++   +    +    + P+  I P     +    +  + 
Sbjct: 272 QIAETADLARLHELRAPGAGVVLSVAAGGPGSLMTPADPVAVIAPTGGGLHAELGLLSRD 331

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
              V+ G    V+   +        +  +  + P  +        Q    V+        
Sbjct: 332 AGLVRAGAPVRVKVDAFPWRHHGMVEGRLADVAPSSAVPPGGGPAQHAARVVFPPGPPLP 391

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
                    G        A   TL    + P+ +   
Sbjct: 392 EGL----MPGMTLTADILAGRRTLLSYFLDPLLEGLS 424


>gi|125654620|ref|YP_001033814.1| membrane-fusion protein [Rhodobacter sphaeroides 2.4.1]
 gi|77386280|gb|ABA81709.1| Membrane-fusion protein [Rhodobacter sphaeroides 2.4.1]
          Length = 432

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/397 (12%), Positives = 114/397 (28%), Gaps = 21/397 (5%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           PI++ VS++G I  +D    ++   + +++   V  G  +  G  L   +   +      
Sbjct: 49  PIDVVVSAAGRIAADDPAAVLRPVTAAVLRSLLVRPGDLVAPGQLLARLDSRTSDADAAQ 108

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            K     L   I   ++ L          ++A E          G+  S  +        
Sbjct: 109 LKAQAAALSARIARIEAELVGRPLAGTGPDRALE----------GRIQSGRAATETALRR 158

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +   L      + +    R  L    +  R L     ++  M +    + A  +  L +
Sbjct: 159 GLEADLARIDRGIEAARAERPALAETLATAREL--EAMRERLMTRQNGTRAAFVETRLAR 216

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E    +     R N      +L+             ++  +++  +L   +   A    
Sbjct: 217 LEAEARQ-----RRNEATLDGLLQERAGAAARLAAFESDRRQKLLEELADLRPRRAVLAE 271

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           ++           + +P AG ++   +    +    + P+  I P     +    +  + 
Sbjct: 272 QIAETADLARLHELRAPGAGVVLSVAAGGPGSLMTPADPVAVIAPTGGGLHAELGLLSRD 331

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
              V+ G    V+   +        +  +  + P  +        Q    V+        
Sbjct: 332 AGLVRAGAPVRVKVDAFPWRHHGMVEGRLADVAPSSAVPPGGGPAQHAARVVFPPGPPLP 391

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
                    G        A   TL    + P+ +   
Sbjct: 392 EGL----MPGMTLTADILAGRRTLLSYFLDPLLEGLS 424


>gi|149001800|ref|ZP_01826773.1| hypothetical protein CGSSp14BS69_08730 [Streptococcus pneumoniae
           SP14-BS69]
 gi|237650847|ref|ZP_04525099.1| hypothetical protein SpneC1_09049 [Streptococcus pneumoniae CCRI
           1974]
 gi|237821338|ref|ZP_04597183.1| hypothetical protein SpneC19_03302 [Streptococcus pneumoniae CCRI
           1974M2]
 gi|147760258|gb|EDK67247.1| hypothetical protein CGSSp14BS69_08730 [Streptococcus pneumoniae
           SP14-BS69]
          Length = 450

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 77/431 (17%), Positives = 148/431 (34%), Gaps = 17/431 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +  PA    + + + I + G +  +  +P    V ++G  +       + +  SG +   
Sbjct: 18  KRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVITG-TEFLSAIGSGKVVTL 76

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
               G  +  G  +++    +           +  LR      +     LN KY+ +   
Sbjct: 77  HKSEGDMVNAGDVIISLSSGQEGLQASSLNKQLVKLRAKEAIFEKFEQSLNEKYNRMS-- 134

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             S EEQ      +Y+ +     NY  S+ Y  ++ + T++  I   R  L+     L+ 
Sbjct: 135 -NSGEEQEYYGKVEYYLSQLNSENYNNSTQYSKIQDEYTKLNKITAERNQLDADLQTLQN 193

Query: 191 LLSSHQKD-----------LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L   Q+                  L  K       +   +  +     E+       K+
Sbjct: 194 ELIQLQQQGDSPSLSDTTSADDKAKLETKILEITTKIEALKTNITSKNSEIDSQQSNIKD 253

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           M R  N+   +A   +A  + E+      N ++  +  + L +     +  +IL+P  GT
Sbjct: 254 MNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQDKAHSILAPNEGT 313

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           + Y          QQ Q + ++    K  Y+ A V    I  V KG  A V        +
Sbjct: 314 LHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKADVAITGVNSQK 373

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTA 417
               K  + +ID     Q+        Y+V++++  L     +  + L+   P EV    
Sbjct: 374 YGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVVLQKDMPVEVRIVY 433

Query: 418 KNTTLAQEIIH 428
              T    I+ 
Sbjct: 434 DKETYLDWILE 444


>gi|15902152|ref|NP_357702.1| hypothetical protein spr0108 [Streptococcus pneumoniae R6]
 gi|116516521|ref|YP_815617.1| hypothetical protein SPD_0115 [Streptococcus pneumoniae D39]
 gi|15457645|gb|AAK98912.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116077097|gb|ABJ54817.1| conserved hypothetical protein [Streptococcus pneumoniae D39]
          Length = 450

 Score =  142 bits (357), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 75/431 (17%), Positives = 146/431 (33%), Gaps = 17/431 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +  PA    + + + I + G +  +  +P    V ++G  +       + +  SG +   
Sbjct: 18  KRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVITG-TEFLSAISSGKVVTL 76

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
               G  +  G  +++    +           +  LR      +     LN KY+ +   
Sbjct: 77  HKSEGDMVNAGDVIISLSSGQEGLQASSLNKQLVKLRAKEAIFQKFEQSLNEKYNRMS-- 134

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             S EEQ      +Y+ +     NY   + Y  ++ + T++  I   R  L+     L+ 
Sbjct: 135 -NSGEEQEYYGKVEYYLSQLNSENYNNGTQYSKIQDEYTKLNKITAERNQLDADLQTLQN 193

Query: 191 LLSSHQKD-----------LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L   Q+                  L  K       +   +  +     E+       K+
Sbjct: 194 ELIQLQQQGDSPSLSDTTSADDKAKLETKILEITTKIEALKTNITSKNSEIDSQQSNIKD 253

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           M R  N+   +A   +A  + E+      N ++  +  + L +     +  +IL+P  GT
Sbjct: 254 MNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQDKAHSILAPNEGT 313

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           + Y          QQ Q + ++    K  Y+ A V    I  V KG    V        +
Sbjct: 314 LHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKVDVAITGVNSQK 373

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTA 417
               K  + +ID     Q+        Y+V++++  L     +  + L+   P EV    
Sbjct: 374 YGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVVLQKDMPVEVRIVY 433

Query: 418 KNTTLAQEIIH 428
              T    I+ 
Sbjct: 434 DKETYLDWILE 444


>gi|319787535|ref|YP_004147010.1| biotin/lipoyl attachment domain-containing protein
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317466047|gb|ADV27779.1| biotin/lipoyl attachment domain-containing protein
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 483

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/395 (12%), Positives = 123/395 (31%), Gaps = 56/395 (14%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G ++    +  + +P +G+++  +V+ G ++  G  LL          I   + +++   
Sbjct: 61  GHLVPTRGMSTVLAPATGVVEAVRVQEGERVRAGQTLLVIAVPRAITGIGDTRQALEQR- 119

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                                             L +               +       
Sbjct: 120 ----------------------------------LRQRREGLHAAHVAQRHQLDAQETGL 145

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             ++ +       LE +    R  +   ++ L  ++ L  +  VSQ  + QQE +V    
Sbjct: 146 RAQLLTTRRELAQLETEIGTRREQIRLARETLERLQQLEGERYVSQLQIKQQESVVLAQV 205

Query: 228 LE---LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            E   L+        ++  + +   E   +        +R+L          + +  +  
Sbjct: 206 GEMQVLQRQATATGRIIAQLEQALAELPAQRTATDAGHARELA--------VLEQEQLET 257

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           + R +  + + + G +V  Q        Q  QPL+ ++P          V  + I  ++ 
Sbjct: 258 RARGELVLTAAVDG-VVTAQLAKPGQAVQAGQPLLSVLPADSPLEAELLVPSRAIAFIEP 316

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPII-------SQQDNNLQTQEYYEVILKITDLA 397
           G +  +R+  Y   +   ++  + +I           +      Q + +Y V + +    
Sbjct: 317 GDSVLLRYQAYPYQKFGHYRGRVGRISRSTLAGGELPATSSAGGQVEPFYRVTVSLAAQE 376

Query: 398 F--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                    LR G   E     +   L + ++ P+
Sbjct: 377 VMAYGRPEPLRPGMLLEADILGEKRRLIEWLLEPV 411


>gi|260222440|emb|CBA32006.1| hypothetical protein Csp_D29960 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 133

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 3/130 (2%)

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                   PLM+I P   +  I   +    I  VK     ++ F         +    + 
Sbjct: 2   GGVVSNGMPLMEIFPKDDVLRIETPLATNLIDKVKVDMEVSILFSALNQSTTPRINGRVV 61

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEII 427
           ++    +      Q   Y+++I+++T        + E++ G PA+V       T    ++
Sbjct: 62  QVAADAATDSR--QNANYFKLIVEVTPDGMQKLQHQEVKAGMPADVFIKTGERTFMSYLL 119

Query: 428 HPITDNWPKI 437
            P+TD   + 
Sbjct: 120 KPLTDRMHRA 129


>gi|285018671|ref|YP_003376382.1| membrane fusion transmembrane protein [Xanthomonas albilineans GPE
           PC73]
 gi|283473889|emb|CBA16391.1| probable membrane fusion transmembrane protein [Xanthomonas
           albilineans]
          Length = 424

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/433 (12%), Positives = 140/433 (32%), Gaps = 52/433 (12%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++   P S +  TL+++  +  ++ W         V  +G ++    ++ + +   G++ 
Sbjct: 22  VRLATPLSTQVWTLVALGIVTAILVWLCFGHYTQRVHVTGLLVPRAGLISLTANTLGVVD 81

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              +  G ++  G  L++     T+  +     SI                         
Sbjct: 82  HVDITEGERVEAGQSLVSLSGEHTSKALGNTSASIST----------------------- 118

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                        L +  S+  +     +    +  +    +  ++      ++ + ++ 
Sbjct: 119 ------------QLQRQASSLRQDMGDAVELQNKQAEDNRMQQTALKEQLTQIDAQITIE 166

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  ++  Q+ +     L     +    + Q++  +     +LR    ++ +  + ++ L 
Sbjct: 167 KKQMALVQELVNKWSGLVAGGYIPAIQVEQEQSALLADESQLRSLQQQRSSTRQQLSVLN 226

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D+     A     +S  L + +R  A     L   E TR    + +P +GTI      + 
Sbjct: 227 DQ----LAQLPLSVSAKLNELRRQLAQVEQTLAQNEATRA-SELRAPASGTISSLLVKA- 280

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  QPL+ IVP       +  V    +  V  G   T+ +  +   +      ++ 
Sbjct: 281 GASVALGQPLLAIVPDGSSLQAQILVPSHAVGFVHIGTEVTLHYQAFPYQKFGLQHGVVR 340

Query: 369 KIDP---------IISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTA 417
            +           ++     +  +   Y   +++ D +     +   LR G   +     
Sbjct: 341 SVSRSALTPGEVTVLLGGGTSASSDPLYLAQVELADQSVQAYGHKEPLRPGMALDADMLL 400

Query: 418 KNTTLAQEIIHPI 430
               + + I  P+
Sbjct: 401 DRRRIVEWIFEPL 413


>gi|212710542|ref|ZP_03318670.1| hypothetical protein PROVALCAL_01605 [Providencia alcalifaciens DSM
           30120]
 gi|212686779|gb|EEB46307.1| hypothetical protein PROVALCAL_01605 [Providencia alcalifaciens DSM
           30120]
          Length = 416

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/416 (15%), Positives = 148/416 (35%), Gaps = 25/416 (6%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
                I    +  L  I++S    G I    N +EI SP SG I +F+++ G  I +   
Sbjct: 18  VFALTIIFWGYIFLAEIDVSSPGDGVISGLSNKLEIISPASGFINQFKIKTGDHIEKNQI 77

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L ++ +++    +  ++ ++ NL          ++F N + D LE+  +     +   + 
Sbjct: 78  LFSYTNLD----VFHQEKTLSNL----------VNFANERIDDLEENKKLLNGLINGLIN 123

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                     N    ++  S   +L+    + +   +L+ +       L+  Q  + ++K
Sbjct: 124 NEDEFQYMAKNDRSKTL--SAYKELSEHMLLIMETNNLQAQYLAQNKELTELQNQIKILK 181

Query: 204 N---LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               L       + +       V ++   +       + ++R I+ L  +      + ++
Sbjct: 182 RKEVLLNNARAPELEKLNNNTEVSRTLALINSGELTAQKLIREISLLEKKHKTRLISEIQ 241

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN-QSFSSSNYAQQSQPLM 319
           E    L + ++   +   ++ +L       +++SP  G I+   +     +Y + S  +M
Sbjct: 242 ENEEQLNRLKKEKLENSGQIELLRNKIRANSVVSPTDGIILSIEKELEQGSYVEASNLVM 301

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I        I AKV  K    +       +        +       + KI        +
Sbjct: 302 VIKKQQDTRVIDAKVYAKYRPFIAVELPVKIVVNSPGFKK--IIHGKVSKISADSFSDKD 359

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
            +  + +Y V +     +  +   +   G P  +  ++K  ++   +   I DN  
Sbjct: 360 RMTQERFYSVQITPNQDSVIEPEHD---GLPVMIYISSKKISVLNYLTALIGDNIS 412


>gi|293476425|ref|ZP_06664833.1| predicted protein [Escherichia coli B088]
 gi|291320878|gb|EFE60320.1| predicted protein [Escherichia coli B088]
          Length = 406

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 73/421 (17%), Positives = 158/421 (37%), Gaps = 50/421 (11%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +T+ S+I  I +I +          + +G +  +  ++ IKS  SG +    +++G  
Sbjct: 25  RAITVCSVIIFICIILFMSFAEYTQKRNVNGIVYPDKGIISIKSKQSGTLSALYIKSGDF 84

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           I  G  LL  +   +T                                     F++ EE 
Sbjct: 85  INSGEKLLAIDASSST-----------------------------------HYFKNNEES 109

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             +   K  S  S+     I+ +    K+   ++     +   +E +  LL A + S Q 
Sbjct: 110 YREMFSKLRSISSRETQDNITDLEAKKKLTEEQVIQTKNSIAIMERQIRLLNAAIHSQQI 169

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             + +++ ++K  VS  + N  +  +    ++L+   +E  +    I  L  E      +
Sbjct: 170 SFSKIQDAYKKRYVSDVEKNNAKMQLIDKKMQLQSLNNEISSKEGQIISLKKE----LED 225

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            +  I     +N++   D + K+  +    E   + +P AG I      +  ++      
Sbjct: 226 TIDRIKNIQNENEKESIDSLIKMYGVASDSE-SILRAPSAGKIAEIVEKT-GSFVNAGDT 283

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++ ++P   +  I A ++P+ I  +KKG    +++  Y   R      II  I  +  Q 
Sbjct: 284 ILTVIPQGSVNQIVAFISPEFIGEIKKGTRVALKYDSYPYQRFGFEHGIIIDISRVPLQP 343

Query: 378 DN--NLQTQEY----YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           ++       ++    Y +++KIT+       I +  G   +V    + T++ + I     
Sbjct: 344 EDIYTNFGLKFENACYRIVIKITE---KKKRINIIPGMSLKVDIPTRKTSIIKWIFPFFR 400

Query: 432 D 432
           D
Sbjct: 401 D 401


>gi|326789224|ref|YP_004307045.1| secretion protein HlyD [Clostridium lentocellum DSM 5427]
 gi|326539988|gb|ADZ81847.1| secretion protein HlyD family protein [Clostridium lentocellum DSM
           5427]
          Length = 509

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 69/487 (14%), Positives = 155/487 (31%), Gaps = 71/487 (14%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            + HP  L     + ++ II +  W     I+I     G +   +NV  I++   G I  
Sbjct: 20  SKPHP-FLTIFIYIILVSIILVGIWMYFGEIDIVSKGRGVVRPNENVSMIRNKVQGEIAS 78

Query: 70  FQVENGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
             +E G  + +G  L T   +D+E   L   + +     R ++  +  +    +      
Sbjct: 79  CDLEEGKIVKKGDVLFTIVYDDLEIKRLQAEEVLKDTEQRLNLLKKLESSIEQDANLFSQ 138

Query: 128 EKAFESREE---------------QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           +   E  +                 + +   +  +T +K    G             +++
Sbjct: 139 DTEIEYYQRYVKYKQDYMSLSNNVNIQNKTDEIATTQTKFSKEGYQEKINEYMEDYEKLK 198

Query: 173 SIYLNRLDLEN------------------KSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +    +N                  K   L+  +   Q   ++   L E + V++ 
Sbjct: 199 QYQQSIEKGQNIFTDKQCTYALDFNNYLIKIKQLQKNIVDKQFTYSLNSELKENDLVAEK 258

Query: 215 DLNQQERIVYKSTLELRE----NIHEQKNMLRHINELYDEANLEF--------------- 255
           +    +  +  +  EL +     +   ++ ++ I      A  E                
Sbjct: 259 EYEASKEALELAENELVQLKTATLKSVQDEMKQIESNKKLAEQEMNKLIIDDGLTQTNVA 318

Query: 256 ----------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                      + L E+   +E+ +  +  +  +L   +      TI SPI GT+   Q 
Sbjct: 319 QRELALKKYKTDALVELYNQIEEQEALYQSQKRELESTQLAIANCTIKSPIDGTVHITQE 378

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTY-IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
            S+ +       +  I+P +   Y I   +   +I  +K G     +F         + +
Sbjct: 379 VSTGDLIASGTDIATIIPINDTMYKIEIFMPNSEIAGLKIGDQIKYKFDALPYKEYGQLE 438

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDL---AFSDNNIELRNGFPAEVLFTAKNTT 421
             I  I      + ++ Q    Y V   I++    ++ +   E++ G   E     +   
Sbjct: 439 GTIGNISSDA--KVSDAQGISGYIVEGSISNETVYSYKNEPAEIKIGMTCEAHVITERKK 496

Query: 422 LAQEIIH 428
           +   ++ 
Sbjct: 497 ILFYLLE 503


>gi|258541426|ref|YP_003186859.1| transporter EamA [Acetobacter pasteurianus IFO 3283-01]
 gi|256632504|dbj|BAH98479.1| transporter EamA [Acetobacter pasteurianus IFO 3283-01]
 gi|256635561|dbj|BAI01530.1| transporter EamA [Acetobacter pasteurianus IFO 3283-03]
 gi|256638616|dbj|BAI04578.1| transporter EamA [Acetobacter pasteurianus IFO 3283-07]
 gi|256641670|dbj|BAI07625.1| transporter EamA [Acetobacter pasteurianus IFO 3283-22]
 gi|256644725|dbj|BAI10673.1| transporter EamA [Acetobacter pasteurianus IFO 3283-26]
 gi|256647780|dbj|BAI13721.1| transporter EamA [Acetobacter pasteurianus IFO 3283-32]
 gi|256650833|dbj|BAI16767.1| transporter EamA [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256653824|dbj|BAI19751.1| transporter EamA [Acetobacter pasteurianus IFO 3283-12]
          Length = 434

 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 54/440 (12%), Positives = 141/440 (32%), Gaps = 60/440 (13%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++ + P S++     ++  ++  I ++I       V ++G ++    ++ + +  +G I 
Sbjct: 22  VQASQPLSIRIAAWFTLALVVLAILYTIWGVYTRRVHATGLMVPPSGLITVNANTTGTIA 81

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
                 G  + +G  L T +   T+     ++  +  LR   D  +   D +  +   +E
Sbjct: 82  LQNATEGQHVKKGDVLFTIDLEATSSSGPTQEHILSQLRHQRDLLQQQKD-IRAQDAPVE 140

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           K     + + L+   ++         + +  V  +++   T   +  +     +++    
Sbjct: 141 KQSMVTQIRYLNQQHQHIGHQLDNDAHVLPVVEAAVRRMQTAQSAHLVTETQFQSQLYTY 200

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             LLSSH + L    +       ++  +      + +   +L  ++++    +  I++  
Sbjct: 201 AQLLSSHAQFLQSYTD-------TEGKIADLTTKLIRYDGQLAHDLNDLDKQIAQIDQQI 253

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E+    +                                   IL+P  GT+   +    
Sbjct: 254 AESEGHRS---------------------------------SIILAPDDGTLTAIRVN-P 279

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                   PL+ ++P          V+   I  + +G    +R+  +   R   ++  + 
Sbjct: 280 GQQVSSGTPLLTLLPTGHALEAELYVSSASIGFLHEGEPVLLRYAAFPYQRFGLYRGHVS 339

Query: 369 KIDP----------------IISQQDNNLQTQEYYEVILKITDL--AFSDNNIELRNGFP 410
           +I                     +  +    Q+ Y + ++           +  L  G  
Sbjct: 340 EITRAPVTATDGTGQKAAPSDKDKTQSQNPGQDIYRIRVRPDQQFVEAYGQHKPLEAGME 399

Query: 411 AEVLFTAKNTTLAQEIIHPI 430
            E         L Q I  P+
Sbjct: 400 VEADIAIDTRRLYQWIFDPV 419


>gi|251788706|ref|YP_003003427.1| biotin/lipoyl attachment domain-containing protein [Dickeya zeae
           Ech1591]
 gi|247537327|gb|ACT05948.1| biotin/lipoyl attachment domain-containing protein [Dickeya zeae
           Ech1591]
          Length = 274

 Score =  140 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 6/166 (3%)

Query: 275 DEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           + M +    ++T  Q + I+SPI G I +    ++S   +  + LM+I P      I A+
Sbjct: 108 ENMQQNNASDQTASQLSLIVSPIRGIIKHILVDTNSEQIRPGRTLMEITPLDDTLLIEAQ 167

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V  + I  ++ G  A + F  Y      + K  IE+I   +           +Y V L+ 
Sbjct: 168 VRLQDIAFLRPGQEAMMAFTTYDYTIFGRLKGYIEQIGQDMVTD---QTGNSFYLVQLRT 224

Query: 394 TD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
               L   D  + + +G PA V       TL   ++ PI     + 
Sbjct: 225 EKNYLGTIDKPLLILSGMPARVDIITGRKTLLSYLLKPIRQARAEA 270



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 45/97 (46%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +  + N P  ++      +  ++ LI W+ +  ++  V ++G+ L++     +++  +G 
Sbjct: 27  QAYEENTPRLIRLSIWTMLAFMLFLIGWAAVAKMDEVVFATGKTLSQSPRYRVQATQAGE 86

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +    V  G  +  GTPL+  E+++  +  D     +
Sbjct: 87  LSDLYVHEGQLVNTGTPLMQLENMQQNNASDQTASQL 123


>gi|168215318|ref|ZP_02640943.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium perfringens CPE str. F4969]
 gi|170713296|gb|EDT25478.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium perfringens CPE str. F4969]
          Length = 500

 Score =  140 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 73/482 (15%), Positives = 160/482 (33%), Gaps = 62/482 (12%)

Query: 7   KNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  + P  L  + L  II  I+    WS     EI V  +G +  ++ +  I +   G
Sbjct: 15  RQVMESKPNKLMFIFLYIIIALIVTFFIWSWFSEKEIIVKVNGVVRPDNEIQAISNIVQG 74

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            ++  +++NG  + +G  L   +  E  D  +  +  IK +    +  +     +N+  +
Sbjct: 75  EVESIKMKNGESVSKGEVLFKIKSTELGDKKNQVEEQIKYINTDNENLEKLNKSINDNTN 134

Query: 126 VLEKAFESRE-----------------------------EQLLDFLGKYHSTCSKVFNYG 156
             E   + +E                                 D L     + S+  N  
Sbjct: 135 YFENNDKEKEYYYKFQSYEAGNKVSLEETNNISSSKDNLNNEKDGLKILSKSISENKNLN 194

Query: 157 IS-SVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMM-----------K 203
              SVY S        +++  N+ D LEN    L   + ++ K+   +           K
Sbjct: 195 KEGSVYSSQYESYASSKAMIQNKTDQLENSKKALNEQIEANNKEKNNLSDENSKAIIDDK 254

Query: 204 NLFEKNAVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHINELYDEA------ 251
           N    N +SQ DL       Q +++   +  +++ +I +    L  +             
Sbjct: 255 NKQINNQISQIDLEIKNNNEQLDKLKSDTLAQIKGSIDKINQNLNKLESNLSSLDESSNI 314

Query: 252 --NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                   +L +I   +  N +   +       +E++ E+ ++ +P  G +  N +    
Sbjct: 315 SKEKNKTTFLAQIEEKINMNNQKKKELEENKKQIEQSIEKCSVKAPSDGKLNINANLEKG 374

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              Q    +  I+P+S    +   +  K I ++K        F           +  IE 
Sbjct: 375 VILQTGAIVASIIPNSDTYRVELMIPTKDIANIKVSEDVKYSFEALPYREYGFLEGKIEN 434

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEI 426
           + P    + ++ +   ++     +       N  E   ++ G   E     +   +   +
Sbjct: 435 LSPDS--KVDSEKGISFFTGEGSLNSNRLYSNKGEESFIKPGMMCEARIITRKEKMLYYL 492

Query: 427 IH 428
           + 
Sbjct: 493 LE 494


>gi|213162096|ref|ZP_03347806.1| hypothetical protein Salmoneentericaenterica_19709 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213609416|ref|ZP_03369242.1| hypothetical protein SentesTyp_02318 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|289824668|ref|ZP_06544195.1| hypothetical protein Salmonellentericaenterica_05656 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|322648252|gb|EFY44712.1| hypothetical protein SEEM675_20570 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
          Length = 257

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 92/246 (37%), Gaps = 6/246 (2%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            +++ ++  L +K      +   +++   K   E+ +           I  + ++     
Sbjct: 3   AEEINILSPLVKKGISPYTNFLNKKQAYIKVKSEINDIESSITLKKDDIELVVNDIEALN 62

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ--SFSSSNYAQ 313
                 +S+ + +N +      S L ++EK   ++ I SP+ G I      + +     Q
Sbjct: 63  NELRLSLSKIISKNLQELEVVNSTLKVIEKQINEEDIYSPVDGVIYKINKSATTHGGVIQ 122

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            +  L +I P  +      K+ PK    +       +        + K + A I+ I P 
Sbjct: 123 AADLLFEIKPKVRTMLADVKILPKYRDQIYVDEAVKLDVQSIIQPKIKSYNATIDNISPD 182

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIE-LRNGFPAEVLFTAKNTTLAQEIIHPITD 432
             +++     Q YY+VI+       +++++  L+ G   +        ++ + ++ P+  
Sbjct: 183 SYEENTGGTIQRYYKVIIAFD---VNEDDLRWLKPGMTVDASVITGKHSIMEYLLSPLMK 239

Query: 433 NWPKIF 438
              K F
Sbjct: 240 GVDKAF 245


>gi|329961548|ref|ZP_08299629.1| auxiliary transport protein, membrane fusion protein family protein
           [Bacteroides fluxus YIT 12057]
 gi|328531760|gb|EGF58589.1| auxiliary transport protein, membrane fusion protein family protein
           [Bacteroides fluxus YIT 12057]
          Length = 390

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 120/418 (28%), Gaps = 72/418 (17%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            H    + +  + +  +   +     + I+ISV  SG I       EI++  + ++    
Sbjct: 19  QHTTKSQAIYWVVLAAVTAALISLPFIYIDISVQGSGVIRPVTEKTEIRAAITELVDSVY 78

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G Q+ +G  LL F        I  +   + +   H+    + L +L           
Sbjct: 79  VREGQQVNKGDILLRFRTSNPDYKITYQTNRLNDYEAHL----ADLTYLARGEVPANFRS 134

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             R ++   F  + +                                             
Sbjct: 135 PVRRQEYAYFTKRKNEQ----------------------------------------ETS 154

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+  +K+    K LF K  +S+ + +           EL   I  Q +            
Sbjct: 155 LTKAKKEYEREKILFNKKLISEEEYDSYYFQYQNQQNELASLIQSQIST----------- 203

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                        DL   +    +  + L   +K ++   + SP+AGTI         + 
Sbjct: 204 ----------WQADLNSYRNQHNEMSTTLKQEQKNKDAYIVRSPVAGTIDQFSGIYKGSS 253

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  Q L  I P          VTP+ I  +  G    V+   +           +++I 
Sbjct: 254 IQAGQSLAVISP-DSTLCTEVYVTPRNIGFMSIGMPVHVQVESFNYNEWGTLPGKVKEIS 312

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
                     Q   +Y+V  ++        N     L+ G      F     +L   +
Sbjct: 313 SDFLTD---AQGNSFYKVKCEMERNYLKRKNGRTGRLKKGMTVSAHFMVTRRSLFDLL 367


>gi|326792722|ref|YP_004310543.1| secretion protein HlyD [Clostridium lentocellum DSM 5427]
 gi|326543486|gb|ADZ85345.1| secretion protein HlyD family protein [Clostridium lentocellum DSM
           5427]
          Length = 509

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 78/495 (15%), Positives = 168/495 (33%), Gaps = 79/495 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           K L    P     + +  +IG ++  I W     I+I     G I   + +  I++   G
Sbjct: 15  KELYETKPNPFFAIFIGLLIGIVVAAIIWMYYGEIDIVSKGRGMIRPNEQLSIIRNKSGG 74

Query: 66  IIKKFQVENGSQILQGTPLLTFE-------DIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           ++    ++ G ++  G  L+T +        ++  ++I  ++  + NLR    + +S+++
Sbjct: 75  VVNSSSLQEGKRVKAGDVLVTIDCAEQEVKKLQLQEVISEQEKILDNLRTLKKSIESSVN 134

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
             N+++D        + EQ  + L +     S+     +  V  +      +++    + 
Sbjct: 135 SFNSEHDEAYVQKYIQYEQDFETLKRSQIIDSQNEEIDLKQVNLNKASYTEKIKKAEKDI 194

Query: 179 LDLENKSS----------------------------LLRALLSSHQKDLTMMKNLFEKNA 210
             LE                                 L++ L   +    +   L E+N 
Sbjct: 195 AGLETLKQSVNEEKSIFKDIDSIYAIEFETYLYDRDALKSKLEEAKTLYNLNVELDEQNL 254

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------------- 257
           V++ +L   ++ V     EL+  +  QK  L    E   EAN    +             
Sbjct: 255 VAKEELKASKQKV----GELKNQLDTQKLTLLKEVEEKIEANQTIIDTSTIENNKLIISE 310

Query: 258 --------------------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                                L ++   +++ +  +  +   L  ++   +  TI + I 
Sbjct: 311 ELLKNKVAKRKLALEQFKTGELVKLDNQIQELEVQYQSDKRNLEGIQIAIDDCTIRASID 370

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY-IRAKVTPKQIQHVKKGYTATVRFPHYA 356
           GT+   Q  +  +   +   L KI+P S   Y +   V    I  +K G     +F   +
Sbjct: 371 GTLNVVQEINKGDLLTEGTELGKIIPVSDSIYKVEIFVPNNDIAGLKVGQEIEYQFDALS 430

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL---AFSDNNIELRNGFPAEV 413
                K K  I  I    SQ +  L     Y +   + D+   ++ +   +L+ G     
Sbjct: 431 YREYGKIKGHITNISTDASQTE--LGGMSGYWITGSLEDVNLYSYKNEPADLKIGMSCNA 488

Query: 414 LFTAKNTTLAQEIIH 428
               +   +   ++ 
Sbjct: 489 YIITEQKKILYYVLE 503


>gi|298489675|ref|YP_003719852.1| secretion protein HlyD family protein ['Nostoc azollae' 0708]
 gi|298231593|gb|ADI62729.1| secretion protein HlyD family protein ['Nostoc azollae' 0708]
          Length = 506

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 70/469 (14%), Positives = 162/469 (34%), Gaps = 51/469 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L + H  +   + ++  I ++G+   ++L   +++V     I     +  ++S  SG ++
Sbjct: 32  LPQIHKWTSIGVGVMLTIFVVGVGLTTVL-NYKVTVKVPASIRPMGELRLVESAISGQVQ 90

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV-- 126
           K  V++   + QG  +   +D          + +I+  +  I    + L  +N +     
Sbjct: 91  KIVVKDNQIVTQGDAITYVDDSRLQTQKSQLQSNIQQGQLQIVHIDAQLGEINTQISAQA 150

Query: 127 -LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            L        +  L    +         N  +S    +L+   +++  +  +R+ L    
Sbjct: 151 NLNNRTILAAQAELGGTQRNFDDQQIKANAEMSQAEVALRFTKSQLERLQQDRV-LTTTI 209

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR--- 242
              +  L+  +     ++ +    A+S + L ++++ V  +  +L +  +  + +L    
Sbjct: 210 DEAQTALNLAKLQRDRLQVIANSGAISHSMLEEKQQAVKSAQAKLEQAKNNAETLLEEKQ 269

Query: 243 -----------------------------HINELYDEANLEFANYLKEISRDLEQN---Q 270
                                         I +    +    A   KE+   L+Q    Q
Sbjct: 270 QALEIARTNLYKARTAINPSNSAVIIASERIKQEEARSEATLAALKKELQTLLQQRLEIQ 329

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           +        L   +    Q  I +PI GT++  +  +     Q S+ + +I P +    I
Sbjct: 330 KQLIRGRQDLLQTQTDLNQSVIRAPITGTLLQLRLRNPGQVVQPSEAIAQIAPLNAPLQI 389

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY---- 386
           +A V  ++I  V+ G    ++            K I++ + P I                
Sbjct: 390 KAYVPAQEINKVEAGQKVQMQVSACPYPDYGTLKGIVKNVAPDIFPVAQTQSQNNTAANI 449

Query: 387 -----YEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIH 428
                YEV ++   L     + +  L+ G        ++  T+ Q I+ 
Sbjct: 450 QQVNGYEVTIEPETLYVGRGDRQCHLQPGMQGRTDIISREETVVQFILR 498


>gi|194447155|ref|YP_002039182.1| hypothetical protein SeKA_B0008 [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194358770|gb|ACF57212.1| hypothetical protein SeKA_B0008 [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|325495690|gb|EGC93552.1| hypothetical protein ECD227_4018 [Escherichia fergusonii ECD227]
          Length = 419

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 83/418 (19%), Positives = 165/418 (39%), Gaps = 38/418 (9%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
             ++I+ +IG+  +     I+I     G +  E++ +EIKSP SG I  F +  G Q+ +
Sbjct: 18  MFITILFVIGVFAYLFFSEIDIVSPGEGIVTGENDKIEIKSPNSGFINDFNIREGDQVSK 77

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G  L T+ +++ T                   E +    +N     ++K  +  E     
Sbjct: 78  GMILFTYTNLDYTHK-----------------ETTLESVINFNDIKIKKLKKELELLKPL 120

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             G   +   K     +           T   +I +   +LE K +LL   L S  K ++
Sbjct: 121 LAGNVDALNEKGKLPSLDGENYIYFQFKTEYDAIAMEEKNLEEKETLLEKELQSRTKQIS 180

Query: 201 MMKN---LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            ++N   L +K   +  D+      + K   E+         + +   +L  +   +  +
Sbjct: 181 FLQNKDDLLKKGGATNIDILNNRYDIEKQKTEMINVKLNFILLRKEFEKLKSQFKTKLYD 240

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQ 316
            +  I+  + + Q+   +   +L++++       I SP+AGTI+         ++ +Q Q
Sbjct: 241 KISSITEQISELQKNNIENDGELSLMKGKVSTNIITSPVAGTILKIDHNLKKGSFIEQYQ 300

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF--PHYADIREKKFKAIIEKIDPII 374
            +M +  +S    I AK   K   ++ +G +  V      + +     F A + KI P  
Sbjct: 301 SIMTVKQNSNGQVIEAKFDAKYRPYIYEGASVKVSVNSTAFKNN----FSARVAKISPDS 356

Query: 375 -SQQDNNLQTQEYYEVILK----ITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
            S   N+ + + YY V +     ++D+ +    I      P  V  T+K  ++ + II
Sbjct: 357 FSDNPNDSRERRYYRVTIDSFDNVSDVNYLPEGI------PVNVFATSKKISIFEYII 408


>gi|194365361|ref|YP_002027971.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194348165|gb|ACF51288.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 414

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/424 (15%), Positives = 148/424 (34%), Gaps = 51/424 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + + + I  +G++++  +         SGE++ +  +  + +P +G++ +  VE
Sbjct: 26  PLRFWLLAVFAAIAAMGIVSFFWIGEYSRRSRVSGELVPDLGLSTVVAPSAGVVARLDVE 85

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +   LLT      T        ++      +D ++S +  +             
Sbjct: 86  EGDHVQRQDGLLTINVPRVTSSGQDAVSTL------LDAQRSRIASVG------------ 127

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
               + +F  +  +T         +++ R L                ++ +       + 
Sbjct: 128 ---AMSEFQDRQLATQQDGAKTQRAAMLRELSQ--------------IDAEIHTRGEQVR 170

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS---TLELRENIHEQKNMLRHINELYDE 250
             ++ L   +++ ++  VS   +NQQE+ V ++      L+      +  L  + +   E
Sbjct: 171 IGRETLARYRSVEDERYVSLIQINQQEQSVLEAVNAQQALQRQATSIRRNLAELEQRLAE 230

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              +  +      RDL    + F    +   +L        + +P+ G +  N+   +  
Sbjct: 231 IPHQRLSAKAVSERDLAALNQEFIRMEADGELL--------LRAPVTGLV-ANRLVEAGQ 281

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q  QPL+ ++P       +  V    I  VK G    +R+  Y   +    +  + +I
Sbjct: 282 AVQPGQPLLSLLPKGSELRAQLLVPSSAIGFVKSGDRVLLRYQAYPHQKFGAHEGTVIRI 341

Query: 371 --DPIISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEI 426
               +   Q     TQ  Y V++ +             LR G   E     +   L + +
Sbjct: 342 SRSALAGNQKEGSTTQSLYRVLVSLDQQGVLAYGKMEPLRPGMQLEADIMGERRKLYEWL 401

Query: 427 IHPI 430
           + P+
Sbjct: 402 LEPL 405


>gi|329115011|ref|ZP_08243766.1| Microcin H47 secretion protein MchE [Acetobacter pomorum DM001]
 gi|326695454|gb|EGE47140.1| Microcin H47 secretion protein MchE [Acetobacter pomorum DM001]
          Length = 434

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/440 (13%), Positives = 142/440 (32%), Gaps = 60/440 (13%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++ + P S++     ++  ++  I ++I       V ++G ++    ++ + +  +G I 
Sbjct: 22  VQASQPLSIRIAAWFTLALVVLAILYTIWGVYTRRVHATGLMVPPSGLITVNANTTGTIA 81

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +     G  + +G  L T +   T+     ++  +  LR   D  +   D +  K   +E
Sbjct: 82  RQNAIEGRHVKKGDVLFTIDLEATSASGPTQEHILSQLRHQRDLLQQQKD-IRAKDAPVE 140

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           K     + + L+   ++         + +  V  +++   T   +  +     +++    
Sbjct: 141 KQSMVTQIRYLNQQHQHIGHQLDNDAHVLPVVEAAVRRMQTAQSAHLVTETQFQSQLYTY 200

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             LLSSH + L                         +S  +    I +            
Sbjct: 201 AQLLSSHAQFL-------------------------QSYTDTEGKIADLT---------- 225

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                +   Y  +++ DL    +  A    ++   E   +   IL+P  GT+   +    
Sbjct: 226 ----TKLIRYDGQLAHDLNDLDKQIAQIDQQIAESEGH-QSSIILAPDDGTLTAVRVN-P 279

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                   PL+ ++P          V+   I  + +G    +R+  +   R   ++  + 
Sbjct: 280 GQQVSSGTPLLTLLPTGHALEAELYVSSASIGFLHEGEPVLLRYAAFPYQRFGLYRGHVS 339

Query: 369 KIDP----------------IISQQDNNLQTQEYYEVILKITDL--AFSDNNIELRNGFP 410
           +I                     +  +    Q+ Y + ++           +  L  G  
Sbjct: 340 EITRAPVTATDGTGQKAAPSDKDKTQSQNPGQDIYRIRVRPDQQFVEAYGQHKPLEAGME 399

Query: 411 AEVLFTAKNTTLAQEIIHPI 430
            E        +L Q I  P+
Sbjct: 400 VEADIAIDTRSLYQWIFDPV 419


>gi|119387050|ref|YP_918105.1| secretion protein HlyD family protein [Paracoccus denitrificans
           PD1222]
 gi|119377645|gb|ABL72409.1| secretion protein HlyD family protein [Paracoccus denitrificans
           PD1222]
          Length = 432

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/427 (14%), Positives = 131/427 (30%), Gaps = 53/427 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S   + L S   +I  + +         V  SG IL    +  + +P  G + +  V  G
Sbjct: 31  SAGAVALFSAAFVIAALCFVTFGDYTRRVRVSGVILPAGGLTRLVAPQPGWVSELAVNEG 90

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++ +G  L   +              I       +T+ +  D L  K   L +A  ++ 
Sbjct: 91  DRVRRGQMLYALD--------------IDTATARGNTQDAVTDILERKRAELHRALAAQR 136

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E        +     +     ++S+ R L     ++ +       LE+ +   R  L   
Sbjct: 137 E--------FDHAARQRLQDQLASLGRELPQLRAQIETAEEFTRQLEDFAERQRRNLDRG 188

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                        +  S+    Q +R            +   +     +    D    E 
Sbjct: 189 MG--------LASDYESRLQALQAQRT----------ELARLRREEVQLAGQRDALTGEL 230

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A +  E    L   Q    D   +L+  E  R    I +P  G +    + +      + 
Sbjct: 231 AGFAPEAEARLAALQAQLLDVEQQLSEAE-ARRALRITAPRDGMVTAIITRA-GQTVAEG 288

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID---- 371
            PL+ IVP  +    +       +  +++G    +R+P +   +  ++   I  I     
Sbjct: 289 TPLLTIVPDDQPLVAQLVAPGGSVGFLREGADVLLRYPAFPYQKFGQYPGRISVISRANL 348

Query: 372 -----PIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
                  ++   +  +    + + +      +        L+ G   E      +  + Q
Sbjct: 349 RGDEVADLAPAADPDKGPSLFRITVAPDRPFVMAYGKPEPLQAGMQVEAHLLLDSRPIWQ 408

Query: 425 EIIHPIT 431
            I+ P+ 
Sbjct: 409 WILEPLF 415


>gi|168487067|ref|ZP_02711575.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|225857982|ref|YP_002739492.1| hypothetical protein SP70585_0182 [Streptococcus pneumoniae 70585]
 gi|183570031|gb|EDT90559.1| conserved hypothetical protein [Streptococcus pneumoniae
           CDC1087-00]
 gi|225722007|gb|ACO17861.1| conserved hypothetical protein [Streptococcus pneumoniae 70585]
          Length = 450

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 74/431 (17%), Positives = 145/431 (33%), Gaps = 17/431 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +  PA    + + + I + G +  +  +P    V ++G  +       + +  SG +   
Sbjct: 18  KRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVITG-TEFLSAIGSGKVVTL 76

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
               G  +  G  +++    +           ++ LR      +     LN KY+ L   
Sbjct: 77  HKSEGDMVNAGDVIISLSSGQEGLQASSLNKQLEKLRAKEAIFQKFEQSLNEKYNHLS-- 134

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             S EEQ      +Y+ +     NY   + Y  ++ + T++  I   R  L+     L+ 
Sbjct: 135 -NSGEEQEYYGKVEYYLSQLNSENYNNGTQYSKIQDEYTKLNKITAERNQLDADLQTLQN 193

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLN-----------QQERIVYKSTLELRENIHEQKN 239
            L   Q+           +   +  L              +  +     E+       K+
Sbjct: 194 ELIQLQQQGDSSSLSDTTSDDDKAKLETKISEITTKIEALKTNITSKNSEIDSQQSNIKD 253

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           M R  N+   +A   +A  + E+      N ++  +  + L +     +  +IL+   GT
Sbjct: 254 MNRTYNDPTSQAYNIYAQLISELGTARSNNNKSITELEANLGVATGQDKAHSILASNEGT 313

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           + Y          QQ Q + ++    K  Y+ A V    I  V KG    V        +
Sbjct: 314 LHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKVDVAITGVNSQK 373

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTA 417
               K  + +ID     Q+        Y+V++++  L     +    L+   P EV    
Sbjct: 374 YGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVILQKDMPVEVQIVY 433

Query: 418 KNTTLAQEIIH 428
              T    I+ 
Sbjct: 434 DKETYLDWILE 444


>gi|218889529|ref|YP_002438393.1| putative secretion protein [Pseudomonas aeruginosa LESB58]
 gi|218769752|emb|CAW25512.1| probable secretion protein [Pseudomonas aeruginosa LESB58]
          Length = 418

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 143/432 (33%), Gaps = 63/432 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             L  +  +  + ++G   +            SG+++     V++ +P +GI+ +  V+ 
Sbjct: 27  TFLTLLAAVMALLVVGFFLFGSYTKRSTV---SGQLVPASGQVKVHAPQAGIVLRKFVQE 83

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L+              +  I      ++  + +L                 
Sbjct: 84  GQAVRRGERLMVLSSERYGSDAGPVQAGISR---RLEQRRDSL----------------- 123

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
               L+ L +            ++S+ R L                L  ++   R LL+ 
Sbjct: 124 -RDELEKLRRLQDDERDSLTSKVASLQRELTT--------------LAAQTDSQRRLLAL 168

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-- 252
                   + L +K  +S + L Q++  +      L+    E+ ++ + + E  +E    
Sbjct: 169 ASDAAARYQGLMDKGYISMDQLQQRQAELLGQRQTLQGLERERTSLRQQLTERRNELAGL 228

Query: 253 -LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               AN L E  R L   ++  A+  +K T+L        + +P +G      +  +   
Sbjct: 229 SARQANQLAETRRQLSAVEQDLAESEAKRTLL--------VTAPESGIATAVLA-EAGQT 279

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S+PL+ IVP             K I  ++ G    +R+  Y   +  ++   ++ I 
Sbjct: 280 VDSSRPLLSIVPADTPLQAELYAPSKSIGFIRPGDAVLIRYQAYPYQKFGQYHGKVQSIS 339

Query: 372 PIISQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                                  ++ Y + + + D A +       L++G   +      
Sbjct: 340 RASVSYAELSSMVGGVPGLGQDGEQLYRLRVTLDDQAVTAYGQPRPLQSGMLLDADILQD 399

Query: 419 NTTLAQEIIHPI 430
              L + ++ P+
Sbjct: 400 TRRLYEWVLEPL 411


>gi|209966006|ref|YP_002298921.1| HlyD family secretion protein [Rhodospirillum centenum SW]
 gi|209959472|gb|ACJ00109.1| HlyD family secretion protein [Rhodospirillum centenum SW]
          Length = 412

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 51/430 (11%), Positives = 131/430 (30%), Gaps = 47/430 (10%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
            P +   +T      +   + ++         + +G +      + +    +G +    V
Sbjct: 23  TPVAWPVLTAFLAGSVGLALAFAATAGYARKETVTGFLAPASGALRVVPVRAGTLASVMV 82

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            NG ++  G  L   +     +       +++             +FL  +    E    
Sbjct: 83  ANGDRVAAGDALFVLDTRHALEDGSTLDAALRRSLAQ------QAEFLAEQIAAEEARSA 136

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           S  E++                               R+  +    + L  +  L     
Sbjct: 137 SEVERVA-----------------------------ARITGLEAELVALSEQRRLQVERA 167

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +   + L  + +L  K  VS+ +   +E    ++ L  R+N+      +        +  
Sbjct: 168 AVTGERLKALSDLRAKGYVSEAEYRARE----EAWLSQRQNLAVLDQQITATKAEIAQTR 223

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           ++ A    E +  L + + + AD   +   +     Q  I +P AG +   Q+ +     
Sbjct: 224 VQRAQLPAETADRLARLRSSLADLRQREAEVAAQGAQ-VIRAPAAGRVTALQA-APGQRV 281

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              +P++ +VP +        V  + I  V  G    + +  +   R   +  ++  +  
Sbjct: 282 DPQKPVLTLVPEAAALQAELFVPSRAIGFVDTGQRVRLMYDAFPFQRFGAYGGVVADVSE 341

Query: 373 IISQQDNNLQT----QEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEI 426
            +   D  +      +  Y V + +           + L+           +  +L + +
Sbjct: 342 TVLAPDEIIGPVRAQEPVYRVAVTLDRATVDAFGRQVPLQADMTVTADIVLEERSLLEWL 401

Query: 427 IHPITDNWPK 436
           + P+     +
Sbjct: 402 LEPLMSARGR 411


>gi|148983506|ref|ZP_01816825.1| hypothetical protein CGSSp3BS71_05229 [Streptococcus pneumoniae
           SP3-BS71]
 gi|147923653|gb|EDK74765.1| hypothetical protein CGSSp3BS71_05229 [Streptococcus pneumoniae
           SP3-BS71]
 gi|301799286|emb|CBW31812.1| unnamed protein product [Streptococcus pneumoniae OXC141]
          Length = 450

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 74/431 (17%), Positives = 145/431 (33%), Gaps = 17/431 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +  PA    + + + I + G +  +  +P    V ++G  +       + +  SG +   
Sbjct: 18  KRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVITG-TEFLSAIGSGKVVTL 76

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
               G  +  G  +++    +           ++ LR      +     LN KY+ L   
Sbjct: 77  HKSEGDMVNAGDVIISLSSGQEGLQASSLNKQLEKLRAKEAIFQKFEQSLNEKYNHLS-- 134

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             S EEQ      +Y+ +     NY   + Y  ++ + T++  I   R  L+     L+ 
Sbjct: 135 -NSGEEQEYYGKVEYYLSQLNSENYNNGTQYSKIQDEYTKLNKITAERNQLDADLQTLQN 193

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLN-----------QQERIVYKSTLELRENIHEQKN 239
            L   Q+           +   +  L              +  +     E+       K+
Sbjct: 194 ELIQLQQQGDSSSLSDTTSDDDKAKLETKISEITTKIEALKTNITSKNSEIDSQQSNIKD 253

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           M R  N+   +A   +A  + E+      N ++  +  + L +     +  +IL+   GT
Sbjct: 254 MNRTYNDPTSQAYNIYAQLISELGTARSNNNKSITELEANLGVATGQDKAHSILASNEGT 313

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           + Y          QQ Q + ++    K  Y+ A V    I  V KG    V        +
Sbjct: 314 LHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKVDVAITGVNSQK 373

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTA 417
               K  + +ID     Q+        Y+V++++  L     +    L+   P EV    
Sbjct: 374 YGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVILQKDMPVEVRIVY 433

Query: 418 KNTTLAQEIIH 428
              T    I+ 
Sbjct: 434 DKETYLDWILE 444


>gi|33862349|ref|NP_893909.1| transporter component [Prochlorococcus marinus str. MIT 9313]
 gi|33640462|emb|CAE20251.1| possible transporter component [Prochlorococcus marinus str. MIT
           9313]
          Length = 391

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 65/418 (15%), Positives = 139/418 (33%), Gaps = 81/418 (19%)

Query: 15  ASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
               R    S+IG     + W  +   E  V + G++    +V EI+ P  G+ +   + 
Sbjct: 37  RFWMRAVTWSLIGTTAFAVGWLAIARTEEIVVAQGKLEPLGDVKEIQIPVGGVARDILI- 95

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
                  G                  +VS   +   +DTE                    
Sbjct: 96  -----KGGD-----------------RVSKGQILIQLDTE-------------------- 113

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                         T S+  N   + + +  +    ++          + + +  R  L+
Sbjct: 114 --------------TSSEQVNSLEAQLTKKQQQLKLKLEEQQGTLHLSQEQVATTRDNLA 159

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q+ L+  + L  + A S+                      +Q N +R +     +  L
Sbjct: 160 LEQQILSRFEFLSAQGAYSELQYL------------------QQLNKVRELRGRVTKEKL 201

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + A     +++++EQ     A   ++LT  + T + +++ SP+ G +   +  +    AQ
Sbjct: 202 DGARQQSILNQEIEQLNSQLAQLKAQLTEAKVTLKYQSLRSPVDGVVFDLKPTTPGFVAQ 261

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            S+P++KIVP         ++   +I  V++G +  +    +        +  +  I   
Sbjct: 262 SSEPVLKIVPFKN-LEADVEIPSNKIGFVREGMSVDISIDSFPATDFGVLEGKVTSIGSD 320

Query: 374 ISQQDNNLQTQEY-YEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEII 427
               D   Q QEY +   +++        N   + L+ G         ++ T  Q ++
Sbjct: 321 ALPPDQQEQRQEYRFPATIQLDSQQLKLKNGTTLPLQVGMSLTANIKLRSVTYLQLLL 378


>gi|255038654|ref|YP_003089275.1| secretion protein HlyD family protein [Dyadobacter fermentans DSM
           18053]
 gi|254951410|gb|ACT96110.1| secretion protein HlyD family protein [Dyadobacter fermentans DSM
           18053]
          Length = 404

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 77/410 (18%), Positives = 148/410 (36%), Gaps = 70/410 (17%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M L++II  IGL   +    +++SV S+G I   D+   IK+  SG +    V    ++ 
Sbjct: 40  MILMTIIAFIGLFVIA----VDVSVKSTGIIRATDDRNAIKALVSGRLDSVFVSENQRVR 95

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  LL  E     +   L K                 D+LN   D+           +L
Sbjct: 96  KGQTLLKIESGILREQNQLVKAQKD-------------DYLNQIKDL----------NIL 132

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             L + ++   K      S +Y+       +             K    +  L + +KD 
Sbjct: 133 LHLSRTNNWSKK--PGLSSGLYKQDFALFWQ-------------KIGDAKNTLVTVEKDF 177

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              K L++  A+S+ + ++   +   +T  ++  + E            +EA  E A   
Sbjct: 178 ARSKKLWDVRAISEAEYDRAVLLHSTATNRIKTIMEE------------EEARWESA--- 222

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                 L Q +    +  S+     + ++   + +PI+GTI   +     +    ++ L 
Sbjct: 223 ------LTQLRMKVRELESQDQQYLREKDFYEVKAPISGTIQQLKGLQPGSIVAANELLA 276

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +I P  +       V PK I  ++ G  A ++   Y   +       +  I   +     
Sbjct: 277 EISP-DEAMLAEMYVLPKDIGLIRTGTQARLQVDAYNYNQWGLVTGEVISISNDVY---T 332

Query: 380 NLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
           N +   +++V  K+   A +  N    +L+ G   +  F     TL Q +
Sbjct: 333 NGKEPPFFKVRCKLDQNALTLKNGYVGKLKKGMTLQARFLVTERTLFQLL 382


>gi|282900115|ref|ZP_06308072.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
 gi|281194997|gb|EFA69937.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
          Length = 513

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 66/472 (13%), Positives = 161/472 (34%), Gaps = 56/472 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L + H  +     ++  I ++G+   + +L  + +V  +G I     +  ++S  SG ++
Sbjct: 36  LPQIHRLTSIGAGIMLTIFLVGIAL-ATILTYKTTVKVAGTIRPVGEIKLVESAISGEVQ 94

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+N   + QG  +   +D +        + SI+  +  +    S L+ + N+   + 
Sbjct: 95  RILVQNNQVVSQGDSMAFVDDSQVQTQKKQLEDSIQKSQLQLLEIDSQLNEIRNQ---IL 151

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRLD----LEN 183
                 E+ +     ++  T     +  I      L+ ++  +     L RL+    L++
Sbjct: 152 DQTNLNEQTIFAAQSEFMGTQRNFDDQRIKGNAELLQAEIAFQFAKSQLQRLEKQGILKS 211

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN---- 239
                   L+        ++ +    A+  + L ++++ +  +  +L    +  ++    
Sbjct: 212 TIQEAETALNLAVIQRNRLQAIASSGAIPASLLEEKQQAIKSARAKLESAKNNAQSLWDD 271

Query: 240 ----------------------------MLRHINELYDEANLEFANYLKEI---SRDLEQ 268
                                         + I +      +  A   KE+    +   +
Sbjct: 272 KQQAFKTAQINLYKARTTMNPSNSAVIIASQRIKQEQVRGEMTIAALNKELGNLLQQRLE 331

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            Q+        L   E   ++  I +PI GT++  +  +     Q  Q + +I P +   
Sbjct: 332 IQKQLTRYRQDLLQTEINLQKTVIRAPITGTLLQLKLRNLGQVVQSGQAIAQIAPLNVPL 391

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD---------- 378
            I+A +  ++I  V+ G    +R            +  ++ I P +   +          
Sbjct: 392 EIKAYIPIQEINKVQVGRKFQMRVSACPYPDYGTLRGRVKNISPDVLSSNIVTNNLTNNI 451

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIH 428
            N      YEV ++   L       +  L+ G        ++   + Q I+ 
Sbjct: 452 TNNTGTNGYEVTMEPETLYVGKGQNKCYLQPGMEGGADIISREENVMQFILR 503


>gi|225853742|ref|YP_002735254.1| hypothetical protein SPJ_0142 [Streptococcus pneumoniae JJA]
 gi|225722642|gb|ACO18495.1| conserved hypothetical protein [Streptococcus pneumoniae JJA]
          Length = 450

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 77/431 (17%), Positives = 149/431 (34%), Gaps = 17/431 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +  PA    + + + I + G +  +  +P    V ++G  +       + +  SG +   
Sbjct: 18  KRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVITG-TEFLSAIGSGKVVTL 76

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
               G  +  G  +++    +           ++ LR      +     LN KY+ L   
Sbjct: 77  HKSEGDMVNAGDVIISLSSGQEGLQASSLNKQLEKLRAKEAIFQKFEQSLNEKYNHLS-- 134

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             S EEQ      +Y+ +     NY   + Y  ++ + T++  I   R  L+     L+ 
Sbjct: 135 -NSGEEQEYYGKVEYYLSQLNSENYNNGTQYSKIQDEYTKLNKITAERNQLDADLQALQN 193

Query: 191 LLSSHQKD-----------LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L   Q+                  L  K +     +   +  +     E+       K+
Sbjct: 194 ELLQLQQQGDSPSLSDTTSADNKAKLETKISEITTKIEALKTNITSKNSEIDSQQSNIKD 253

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           M R  N+   +A   +A  + E+      N ++  +  + L +     +  +IL+P  GT
Sbjct: 254 MNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQDKAHSILAPNEGT 313

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           + Y          QQ Q + ++    K  Y+ A V    I  V KG  A V        +
Sbjct: 314 LHYLLPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKADVAITGVNSQK 373

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTA 417
               K  + +ID     Q+        Y+V++++  L     +  + L+   P EV    
Sbjct: 374 YGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVVLQKDMPVEVRIVY 433

Query: 418 KNTTLAQEIIH 428
              T    I+ 
Sbjct: 434 DKETYLDWILE 444


>gi|330960738|gb|EGH60998.1| secretion protein [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 420

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 62/430 (14%), Positives = 142/430 (33%), Gaps = 53/430 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S++    ++++  + +  +          ++SG +L E  ++ I +P +G++    + 
Sbjct: 26  PVSMRLAAAVALLFCMCMGLFLSFATYTKRTAASGVLLPETGLIRIYAPQTGVVNNLSIA 85

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +     L+                                       D        
Sbjct: 86  EGQPVNADAVLMALSS-----------------------------------DTQNGETGG 110

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            +  +   + +   + ++  +  ++   + L+ K  ++ ++   +  +  +  L R  L+
Sbjct: 111 AQRAISLSIKRRQESLTQEIDKTLALHQQELEGKKRQVEALETEQQKILAQIDLARQRLA 170

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +       NL  ++ VS++ L ++E     + L++R    E    L  +         
Sbjct: 171 LTKGIAERYANLQRQDYVSRDQLQEKE----DAVLDMRLRGEELNRSLLTVRAESTRLRA 226

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E        S+ L   QR  A+   +L   E  RE   I +P AG        S+ +   
Sbjct: 227 ELVELPFNQSKQLADLQRRLAENQDQLVESETKRE-ILITAPTAGEATALSV-SNGSRVD 284

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            ++PL+ IVP     +    +  + +  V+ G T  +R+  Y   R       +  I   
Sbjct: 285 SARPLLSIVPADAKLHAELCLPSRSVGFVRAGDTVMLRYQAYPYQRFGLQPGTVSSISRT 344

Query: 374 ISQQDNNLQ----------TQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTT 421
               D  +              +Y V + +             LR+G   +     +   
Sbjct: 345 ALPADEVMTLGNVSEQMREQGPFYRVTVALASQTIEGQGKRDRLRSGMQLDADIMQEKLP 404

Query: 422 LAQEIIHPIT 431
           L + ++ P+ 
Sbjct: 405 LYEWLLEPLR 414


>gi|320014916|gb|ADV98487.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 333

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 111/302 (36%), Gaps = 10/302 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R   L I+ ++ ++ W+I+  ++I  S+SG+++  ++   I+    G++ 
Sbjct: 35  VERPIAPLARRTAWLLILTLLLVLIWAIIGKLDIHASASGKVIVAEHSKIIQPAEPGVVT 94

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V +G  +  G  L+    I     +      ++     ++  +      +      +
Sbjct: 95  EINVRDGDTVDAGQVLIALNPIGIDAEVRNINQQLQYR--QLEAARLVALLADEPLKNFK 152

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             + S E  ++            +     + V   L  + + +     +       +S  
Sbjct: 153 PPYNSPESLVV--------ASRALLTKEYAEVTAELSRQDSELAVNQAHLQAGIEHNSHQ 204

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +ALL +  + L   + L +  ++++ +L  QER    +T E      EQ  +    + L 
Sbjct: 205 KALLKNIHRRLQASRTLAKSKSIAEVELLVQEREWLTATAEANRLQSEQDILRAKAHSLV 264

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A   ++    L +          +   +   + Q+T+ +P+AG I      + 
Sbjct: 265 QTRMHYLAKIDRDNRERLNKTHEIIHQLQQEQIKMMDKQRQQTLRAPVAGVIQQLAVHTL 324

Query: 309 SN 310
             
Sbjct: 325 GG 326


>gi|285018565|ref|YP_003376276.1| membrane fusion transmembrane protein [Xanthomonas albilineans GPE
           PC73]
 gi|283473783|emb|CBA16286.1| probable membrane fusion transmembrane protein [Xanthomonas
           albilineans]
          Length = 391

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/394 (12%), Positives = 136/394 (34%), Gaps = 49/394 (12%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
             SG ++    ++ +  P +G I +  V  G ++  G PLL   + +++ L     V++ 
Sbjct: 25  PVSGTLVPTHGLLTVSVPSAGSITRIFVREGDRVRAGQPLLEVSETQSSALKGDVGVAVS 84

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                                  E+    R+  L D  G+      ++     + + + +
Sbjct: 85  -----------------------EQLSFKRQRLLDDLTGQ-----DRLAGMQRNDMRQRI 116

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
            +   ++R +         ++    AL     K         +   VS+  +  Q    +
Sbjct: 117 ALLQAQIRQVDDQITVQVQRAKAAMALYEQWSKYQ-------DSGVVSKQQILTQ----H 165

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              LE +  + E +     +++   E   +       ++    + +R  +D +++L    
Sbjct: 166 DQALEHQAQLMELRRQGFQLHQQMSELQAQADQLPDIVAGRNNETERELSD-VAQLIAKN 224

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
             +    + SP+ G +     ++  +     QP++ ++P +        +  + +  ++ 
Sbjct: 225 AAQHAGLLKSPVDGIVTSAPIYAGQSVV-ADQPMVAVLPAASTLQAELWIPTQAVGFIRA 283

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDP------IISQQDNNLQTQEYYEVILKITDLAF 398
           G    +R+  Y   +  ++   ++++         +++       +  Y V++++ +   
Sbjct: 284 GEQVVIRYRAYPYQKFGQYFGRVQQVSRSSLSPSEVNKATGKDIKEASYRVLVRLENQHV 343

Query: 399 S--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                   LR G   +         L + +  PI
Sbjct: 344 QVYGRPETLRPGMTLDADILLDRRRLFEWLFDPI 377


>gi|319427852|gb|ADV55926.1| bacteriocin type I transporter, HlyD family protein [Shewanella
           putrefaciens 200]
          Length = 415

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 62/435 (14%), Positives = 149/435 (34%), Gaps = 49/435 (11%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             ++  +    P S+  +++     ++ +  +          +  G ++ +  V++  + 
Sbjct: 15  QRLYGEISLAQPLSIYTVSVSIFFTVLVVALFLYFSHYARKETVRGYLVPDKGVIKTYAN 74

Query: 63  FSGIIKKFQVENGSQILQGTPLLT-FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
            +G ++   V+ G+ +  G PL+T       T  I+L +V I  L+              
Sbjct: 75  RNGNVEVLHVKEGANVNAGDPLVTVIIRSSMTSGIELSEVLINELK-------------- 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                        ++Q+L+   K +S  +      +            R+  +  +   +
Sbjct: 121 ------------HQQQILNEEIKNNSALNLSETKRLE----------KRLSDLIESMAVV 158

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
             + +LL   L+           L++   +S+ D   Q        +E+++ +   ++  
Sbjct: 159 SRQKALLDDKLTIQINQNKQHDKLYKDGYLSELDYQFQ----LSKLIEVKQELENVESNR 214

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             IN   ++   E A+   + +       +  +D   +L   E +  +  + +  +GT+ 
Sbjct: 215 VSINSELNQTRSELASLPFQFNLKQSDVHKRQSDIQKQLNEAENSY-RFVVRAQESGTVA 273

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                    +   ++PLM I+P          +  +    VK+G  A +RF  +   R  
Sbjct: 274 SVSVV-EGEFIANNRPLMSIIPKGSSLVAELLLPTRSAGFVKQGDEARLRFDAFPYQRFG 332

Query: 362 KFKAIIEKIDP----IISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLF 415
              + + ++D               T+  Y +   ++            LR+G   E   
Sbjct: 333 FLHSEVLRVDKALLLDGEADLPVKLTEPVYRIRTTLSAQDMQAYGEAFPLRSGMLLEADI 392

Query: 416 TAKNTTLAQEIIHPI 430
                TL   ++ PI
Sbjct: 393 VLDKRTLLDWLLDPI 407


>gi|322833441|ref|YP_004213468.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
 gi|321168642|gb|ADW74341.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
          Length = 428

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 66/402 (16%), Positives = 145/402 (36%), Gaps = 63/402 (15%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
            SGEI+ + + + + SP  G++ K  V+ G  + +G PL   +    T   ++   ++  
Sbjct: 56  VSGEIITQPHSINLFSPEQGVVTKLYVDTGKPVKKGQPLYEIDVSRVTQAGNVSTTTLAA 115

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           ++   +                                +  S  +++ +    ++    +
Sbjct: 116 IKKQRE--------------------------------QIDSIIAQLEHNKQETLQNLQQ 143

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                 ++  +++  +++    L A+  S Q      K    K  ++ + LN Q  + Y+
Sbjct: 144 QLDQYQKAHEVSQSMVDSAQEGLDAMKKSMQNYGAYQK----KGLINTDQLNNQRYLFYQ 199

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTI 282
                +    +       I  L  E     A +  +IS+        +R  A   +K ++
Sbjct: 200 QQTSFQSLNTQAIQEALQITNLRSELVTRAAEFDNQISQYGYQRNDLERQLAQADAKGSL 259

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP-HSKLTYIRAKVTPKQIQH 341
           L        I +P +G I      +          L ++VP  +   ++ A +  + + +
Sbjct: 260 L--------ITAPTSGKISSLSV-TPGQMVNAGDSLAQLVPASNSPFFLVAWLPNESVPY 310

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQDNNLQT----------QEYYEV 389
           VK G    +R+  Y   +  +F   +E I   P+  Q+ N+  +            YY+V
Sbjct: 311 VKAGEHINIRYEAYPFEKYGQFPGTVESISSAPVSEQELNSYASAPRTANGTIRGPYYKV 370

Query: 390 ILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           I+ +   A +     + L +G  AE     +   L Q ++ P
Sbjct: 371 IVSLDKKAMNWHGETLNLSSGMKAESTLFLEKRPLYQWMLSP 412


>gi|168489411|ref|ZP_02713610.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
 gi|183572030|gb|EDT92558.1| conserved hypothetical protein [Streptococcus pneumoniae SP195]
          Length = 449

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 77/431 (17%), Positives = 148/431 (34%), Gaps = 17/431 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +  PA    + + + I + G +  +  +P    V ++G  +       + +  SG +   
Sbjct: 18  KRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVITG-TEFLSAIGSGKVVTL 76

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
               G  +  G  +++    +           ++ LR      +     LN KY+ L   
Sbjct: 77  HKSEGDMVNAGDVIISLSSGQEGLQASSLNKQLEKLRAKEAIFQKFEQSLNEKYNHLS-- 134

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             S EEQ      +Y+ +     NY   + Y  ++ + T++  I   R  L+     L+ 
Sbjct: 135 -NSGEEQEYYGKVEYYLSQLNSENYNNGTQYSKIQDEYTKLNKITAERNQLDADLQALQN 193

Query: 191 LLSSHQKD-----------LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L   Q+                  L  K +     +   +  +     E+       K+
Sbjct: 194 ELLQLQQQGDSPSLSDTTSADDKAKLETKISEITTKIEALKTNITSKNSEIDSQQSNIKD 253

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           M R  N    +A   +A  + E+      N ++  +  + L +     +  +IL+P  GT
Sbjct: 254 MNRTYNNPTSQAYNIYAQLISELGTARSNNNKSITELEANLGVATGQDKAHSILAPNEGT 313

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           + Y          QQ Q + ++    K  Y+ A V    I  V KG  A V        +
Sbjct: 314 LHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKADVAITGVNSQK 373

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTA 417
               K  + +ID     Q+        Y+V++++  L     +  + L+   P EV    
Sbjct: 374 YGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVVLQKDMPVEVRIVY 433

Query: 418 KNTTLAQEIIH 428
              T    I+ 
Sbjct: 434 DKETYLDWILE 444


>gi|160898502|ref|YP_001564084.1| secretion protein HlyD family protein [Delftia acidovorans SPH-1]
 gi|160364086|gb|ABX35699.1| secretion protein HlyD family protein [Delftia acidovorans SPH-1]
          Length = 424

 Score =  136 bits (343), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 65/404 (16%), Positives = 143/404 (35%), Gaps = 53/404 (13%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            + SG ++  D  +++ +P +GI+ + +++ G ++ QG  L    D  +    + +   I
Sbjct: 61  ATVSGILVPADGAIKVMAPVNGIVSELRIQEGQRVKQGDVLFVMADQRSQTG-NQQTTKI 119

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            +LR     ++                         + L +  +T  ++     + + R 
Sbjct: 120 SDLRLASLAQRQ------------------------ESLKRLRTTTQQLGMTNEAGLRRQ 155

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                  ++           +   L  ++++H       + L EK  +S  +L  +E  +
Sbjct: 156 HDNINEELQRNQQELDLYARRIQALSKIVANH-------RELAEKKYISHLELQNKEEQL 208

Query: 224 YKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                +L   + +  +      ++     +A ++ A  L EI RDL   +    +  S+ 
Sbjct: 209 SSLETQLLGAQRSRSQLTRSSANLLSEIHQAPIKVAGQLAEIDRDLASLELETTEIASR- 267

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                  +   I +PI+G +    +    +    SQ L  IVP +           K + 
Sbjct: 268 -------DGFAITAPISGRVTAINANRGQSV--SSQALAVIVPENAPLMAHLFAPSKALG 318

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQ----DNNLQTQEYYEVILKIT 394
            V+ G +  +R+  Y        + I+ ++   P+  +        ++ +  Y V +KI 
Sbjct: 319 FVQSGQSVRLRYEPYPYQTYGMHEGIVLEVSNSPLRPEDFAILSTTIKQEGMYRVTVKIK 378

Query: 395 DLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
               + N  +  L  G   E         L   I+ PI  N  +
Sbjct: 379 SQIITKNGKQTTLFPGIALEADIQQDKRRLIDWILAPIRGNANR 422


>gi|148994314|ref|ZP_01823578.1| hypothetical protein CGSSp9BS68_07267 [Streptococcus pneumoniae
           SP9-BS68]
 gi|147927344|gb|EDK78376.1| hypothetical protein CGSSp9BS68_07267 [Streptococcus pneumoniae
           SP9-BS68]
 gi|332075786|gb|EGI86253.1| hypothetical protein SPAR50_0121 [Streptococcus pneumoniae GA17570]
          Length = 450

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 77/431 (17%), Positives = 148/431 (34%), Gaps = 17/431 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +  PA    + + + I + G +  +  +P    V ++G  +       + +  SG +   
Sbjct: 18  KRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVITG-TEFLSAIGSGKVVTL 76

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
               G  +  G  +++    +           ++ LR      +     LN KY+ L   
Sbjct: 77  HKSEGDMVNAGDVIISLSSGQEGLQASSLNKQLEKLRAKEAIFQKFEQSLNEKYNHLS-- 134

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             S EEQ      +Y+ +     NY   + Y  ++ + T++  I   R  L+     L+ 
Sbjct: 135 -NSGEEQEYYGKVEYYLSQLNSENYNNGTQYSKIQDEYTKLNKITAERNQLDADLQALQN 193

Query: 191 LLSSHQKD-----------LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L   Q+                  L  K +     +   +  +     E+       K+
Sbjct: 194 ELLQLQQQGDSPSLSDTTSADDKAKLETKISEITTKIEALKTNITSKNSEIDSQQSNIKD 253

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           M R  N    +A   +A  + E+      N ++  +  + L +     +  +IL+P  GT
Sbjct: 254 MNRTYNNPTSQAYNIYAQLISELGTARSNNNKSITELEANLGVATGQDKAHSILAPNEGT 313

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           + Y          QQ Q + ++    K  Y+ A V    I  V KG  A V        +
Sbjct: 314 LHYLVPLKQGMSIQQGQTIAEVSGKEKGYYVEAFVLASDISRVSKGAKADVAITGVNSQK 373

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTA 417
               K  + +ID     Q+        Y+V++++  L     +  + L+   P EV    
Sbjct: 374 YGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVVLQKDMPVEVRIVY 433

Query: 418 KNTTLAQEIIH 428
              T    I+ 
Sbjct: 434 DKETYLDWILE 444


>gi|108807605|ref|YP_651521.1| hypothetical protein YPA_1610 [Yersinia pestis Antiqua]
 gi|108811881|ref|YP_647648.1| hypothetical protein YPN_1719 [Yersinia pestis Nepal516]
 gi|145598181|ref|YP_001162257.1| hypothetical protein YPDSF_0884 [Yersinia pestis Pestoides F]
 gi|167468562|ref|ZP_02333266.1| hypothetical protein YpesF_11834 [Yersinia pestis FV-1]
 gi|229894937|ref|ZP_04510115.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis Pestoides A]
 gi|229897679|ref|ZP_04512835.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229898324|ref|ZP_04513471.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229902184|ref|ZP_04517305.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis Nepal516]
 gi|270490656|ref|ZP_06207730.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294503718|ref|YP_003567780.1| hypothetical protein YPZ3_1608 [Yersinia pestis Z176003]
 gi|108775529|gb|ABG18048.1| hypothetical protein YPN_1719 [Yersinia pestis Nepal516]
 gi|108779518|gb|ABG13576.1| hypothetical protein YPA_1610 [Yersinia pestis Antiqua]
 gi|145209877|gb|ABP39284.1| hypothetical protein YPDSF_0884 [Yersinia pestis Pestoides F]
 gi|229681080|gb|EEO77175.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis Nepal516]
 gi|229688614|gb|EEO80683.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229694016|gb|EEO84065.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229702032|gb|EEO90053.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis Pestoides A]
 gi|262362162|gb|ACY58883.1| hypothetical protein YPD4_1976 [Yersinia pestis D106004]
 gi|262365495|gb|ACY62052.1| hypothetical protein YPD8_1367 [Yersinia pestis D182038]
 gi|270339160|gb|EFA49937.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294354177|gb|ADE64518.1| hypothetical protein YPZ3_1608 [Yersinia pestis Z176003]
          Length = 333

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 111/302 (36%), Gaps = 10/302 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R   L I+ ++ ++ W+I+  ++I  S+SG+++  ++   I+    G++ 
Sbjct: 35  VERPIAPLARRTAWLLILTLLLVLIWAIIGKLDIHASASGKVIVAEHSKIIQPAEPGVVT 94

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V +G  +  G  L+    I     +      ++     ++  +      +      +
Sbjct: 95  EINVRDGDTVDAGQVLIALNPIGIDAEVRNINQQLQYR--QLEAARLVALLADEPLKNFK 152

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             + S E  ++            +     + V   L  + + +     +       +S  
Sbjct: 153 PPYNSPESLVV--------ASRALLTKEYAEVTAELSRQDSELAVNQAHLQAGIEHNSHQ 204

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +ALL +  + L   + L +  ++++ +L  QER    +T E      EQ  +    + L 
Sbjct: 205 KALLKNIHRRLQASRTLAKSKSIAEVELLVQEREWLTATAEANRLQSEQDILRAKAHSLA 264

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                  A   ++    L +          +   +   + Q+T+ +P+AG I      + 
Sbjct: 265 QTRMHYLAKIDRDNRERLNKTHEIIHQLQQEQIKMMDKQRQQTLRAPVAGVIQQLAVHTL 324

Query: 309 SN 310
             
Sbjct: 325 GG 326


>gi|289624253|ref|ZP_06457207.1| secretion protein [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289650962|ref|ZP_06482305.1| secretion protein [Pseudomonas syringae pv. aesculi str. 2250]
 gi|330867328|gb|EGH02037.1| secretion protein [Pseudomonas syringae pv. aesculi str. 0893_23]
          Length = 418

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 63/430 (14%), Positives = 144/430 (33%), Gaps = 53/430 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S++    ++++  I +  +          ++SG +L E  ++ I SP +G+I +  + 
Sbjct: 24  PLSMRLAAAMALLFCISMGLFLTFATYTKRTAASGVLLPETGLIRIYSPQAGVITRLDIV 83

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L+                                       D        
Sbjct: 84  EGQHVTDGAVLMALSS-----------------------------------DTQSGEAGG 108

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            +  +   + +   + S+  +  ++   + L+ K  ++ ++   +  +  +  L    L+
Sbjct: 109 AQRAISLSIKRRQESLSQEIDETLALHLQELEGKKRQVAALETEQQKILAQIDLTSQRLA 168

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +       NL  ++ VS++ L +++     + L++R    E    L  +         
Sbjct: 169 LTKGLAERYANLQRQDYVSRDQLQEKQ----DAVLDMRLRGEELNRSLLTVRAESARLRA 224

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E        S+ L   +R  A+   +L   E  RE   I +P  G +      S+ +   
Sbjct: 225 ELVELPFNQSKQLADLRRRLAENQDRLIESETKRE-IFITAPTLGEVTAIAV-SNGSRVD 282

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            ++PL+ IVP     +    +  + +  V+ G T  +R+  Y   R       +  I   
Sbjct: 283 STRPLLSIVPADAKLHAELYLPSRSVGFVRTGDTVMLRYQAYPYQRFGLQPGTVSSISRT 342

Query: 374 ISQQDNNLQ----------TQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTT 421
               D  +              +Y V + +         +   LR+G   +     +   
Sbjct: 343 ALPADEVMTLGNVSEPMREQGPFYRVTVALASQTIDGQGMHERLRSGMQLDADIMQERLP 402

Query: 422 LAQEIIHPIT 431
           L + ++ P+ 
Sbjct: 403 LYEWMLEPLR 412


>gi|24376278|ref|NP_720386.1| toxin secretion, membrane fusion protein [Shewanella oneidensis
           MR-1]
 gi|24344850|gb|AAN52986.1| bacteriocin type I transporter, HlyD family protein [Shewanella
           oneidensis MR-1]
          Length = 415

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 59/434 (13%), Positives = 144/434 (33%), Gaps = 47/434 (10%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             ++ ++    P S+  +++  ++ +  +I +          +  G ++ +  V++  + 
Sbjct: 15  QRLYGDISLAQPLSIYTISIAILLIVTAIILFLYFSHYARKETVRGYLVPDKGVIKTYAN 74

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +    V+ GS +  G PL+T   I  + +    ++S                    
Sbjct: 75  RIGNVDILHVKEGSDVNAGDPLVTV--IIRSSMASGFELS-------------------- 112

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                        E L+  L +  S  ++  +  I            R+  +  +   L 
Sbjct: 113 -------------ETLISELKQQQSILNQELDNNIELNAAETLRLKKRLSDLSESMKVLS 159

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +  LL   L+           L++   +S+ D   Q        +E+++ +   ++   
Sbjct: 160 RQKQLLADKLNIQVAQKKQHDKLYKDGYLSELDYQLQ----LSKLIEVKQEVENLESNKI 215

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I+   ++ + E  +   + +       +  +D   +L   E +     I +  +GT+  
Sbjct: 216 SIDRELNQTHAELVSLPFQFNLKQSDVHKRQSDIQRQLNEAENSYT-FVIRAQESGTVAA 274

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   +   ++PLM I+P          +  +    VK+G  A +RF  +   R   
Sbjct: 275 VSVV-EGEFIASNRPLMSIIPKGSSLVAELLLPTRSAGFVKQGDEARLRFDAFPYQRFGF 333

Query: 363 FKAIIEKIDP----IISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFT 416
             + + ++D               ++  Y +   ++            L++G   E    
Sbjct: 334 LHSEVLRVDKALLLDGEADLPVKLSEPVYRIKTTLSAQDMQAYGEAFPLKSGMLLEADIV 393

Query: 417 AKNTTLAQEIIHPI 430
               TL   ++ PI
Sbjct: 394 LDRRTLLDWLLDPI 407


>gi|308185473|ref|YP_003929605.1| type I secretion membrane fusion protein [Pantoea vagans C9-1]
 gi|308055753|gb|ADO07923.1| putative type I secretion membrane fusion protein [Pantoea vagans
           C9-1]
          Length = 419

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 147/432 (34%), Gaps = 64/432 (14%)

Query: 16  SLKRMTLLSIIGIIG----LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             + + +  +I I         +      E    S+GE+L E+ ++ +  P S  +    
Sbjct: 28  PYRWLVISVVIFITAVTTLFFIFGSYTKYES---STGELLPENGMLVVPPPVSATVVDIP 84

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +   L+      +T +   ++V  +NL    +  +  L  L   +DV     
Sbjct: 85  VKEGQLVKKDDVLMVLSSEVSTQMGQTRQVIAENLVAQRERLQQDLQTLAKLHDV----- 139

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                                           +K     + S+ L +  L  + S  R  
Sbjct: 140 -------------------------------EMKGLSDTIASLKLQQEQLRLQLSHRRKQ 168

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNMLRHINELY 248
           ++  +  L  +  +  +   S   L +QE  +  S     E +  + +    +    +  
Sbjct: 169 VALAKLQLDKLNAMHLEGYASNRQLEEQESNLLDSQARYQEYQRQLLDTSQKIVQAEQQL 228

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E  L+      +I R L  N+++ A+  ++ +I         + +P +G +       +
Sbjct: 229 HEKPLDDEKKRNDIERQLADNRQSMAENEARRSI--------ELRAPKSGYV-GMIMVKN 279

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  Q  + I+P++     R  V  + I  ++ G    +R+  +   +  +    + 
Sbjct: 280 GQMLNAGQSAIAILPNNTNLVARIMVNTQSIGFIQPGQRVVLRYKAFPYQKFGQQYGKVI 339

Query: 369 KIDP-------IISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKN 419
           ++         + +    N   ++ Y V++ +     S    N +L+ G   +  F    
Sbjct: 340 EVSRTALSPQEVTTLTGKNNVQEQQYRVLVSLDKQTISAYSQNEKLKPGMALDADFIVDK 399

Query: 420 TTLAQEIIHPIT 431
             L + ++ PI 
Sbjct: 400 RRLYEWVLEPIF 411


>gi|268591524|ref|ZP_06125745.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
 gi|291312978|gb|EFE53431.1| conserved hypothetical protein [Providencia rettgeri DSM 1131]
          Length = 416

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 75/439 (17%), Positives = 163/439 (37%), Gaps = 31/439 (7%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M H+    L + + A  K    L I  +   I + IL  IEIS    G I    N +EI 
Sbjct: 1   MKHY----LNKLNRAPKKLKIFLGITSL--FIGYIILAKIEISSPGEGIISGVSNRLEIV 54

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           SP SG I +F ++ G ++ +   L ++ +++    +  ++ ++  L    +   + L+  
Sbjct: 55  SPASGFINQFAIKTGDKVEKDQVLFSYTNLD----VFHQEKTLSGLVTFANERINELEEN 110

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               + +     + E +   F     S     +      +   L+M+++ +R  Y++++ 
Sbjct: 111 KKLLNKILDGSINTESEYFFFAKGLQSKTLSAYRELYGHIL--LRMEISNLRDKYISQI- 167

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              +SS L   ++  +K   ++KN        + +       + ++T  +       + +
Sbjct: 168 --KESSELENQINILKKKDLLLKN----ARAPEIEKLNNNAEISRTTALIASGELNAQGL 221

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           LR I+    +        ++E    L + ++   +   ++ +L       ++LSP  G +
Sbjct: 222 LREISLQEKKYTARLIGEIQENETLLNRLKKEKLENSGQMELLRNKIRANSVLSPANGIV 281

Query: 301 VYN-QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +   +     +Y + S  +M I        I  K+  K    +     A +        +
Sbjct: 282 LSIEKDLEKGSYVEASNLVMVIKKQQSTRVIEGKILAKYRPFIAPQLPAKIVVNSPGFKK 341

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN---GFPAEVLFT 416
                  + KI             + YY V +        + N EL     G P  +  +
Sbjct: 342 --IINGKVTKISADSFSDRERNSQERYYSVQI------IPEQNTELLPEHDGLPVMLYIS 393

Query: 417 AKNTTLAQEIIHPITDNWP 435
           +K  ++   +   I+DN  
Sbjct: 394 SKEISVLHYLTALISDNIT 412


>gi|159030470|emb|CAO91374.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 564

 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 74/521 (14%), Positives = 169/521 (32%), Gaps = 94/521 (18%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIK-- 60
           F  K L    P    R  L  +I  + +   W +L  ++ + S+ G +  +   ++ K  
Sbjct: 34  FATKELLDALPQRWTRGLLYFLIVFVAIALPWGMLSRVDETGSARGRLEPQGGTIKQKLN 93

Query: 61  --------SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS---------- 102
                   +  +  ++   +E G  +  G  L+  + +   + I   ++           
Sbjct: 94  LTYTSAALNSQTAKVEMLNIEEGDMVKAGDILMELDSLPIRERITQLQIQLQSQNNRLNA 153

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL-------DFLGKYHSTCSKVFNY 155
           +K  +  ++TE    +  N    + + +   +  Q         +   +   T       
Sbjct: 154 LKQQKNQLETELRTQERQNQSQQLEKLSQVEQARQTFQSLKTTYNLQEQEKLTQIAQAEQ 213

Query: 156 GISSVYRSLKMK----LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            ++++ R+L ++    LT++        D     +L    L    +++   +NLF    +
Sbjct: 214 NLAALRRTLNLQREEKLTQVAQAKQQLEDSNTAYNLAELRLQKALREVERYQNLFHNGVI 273

Query: 212 S----------------------------QNDLNQQ------------------------ 219
           +                            +  L +Q                        
Sbjct: 274 AEVRVVEQENIADERQSIWKQSQADIEQARLRLEEQKSSYERIVNQGKADIEQAELRLIE 333

Query: 220 -----ERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
                ERIV +   ++ +    + EQ+N ++ +    + A  +    LK +   +   + 
Sbjct: 334 QKRIYERIVNQGEADIEQAKLRLAEQENSVQTLTHAGEIALSKIKEQLKSLDSQISSIKS 393

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                  ++  L+   E++ + +   GTI         +  QQ   +++I P      ++
Sbjct: 394 EVTQTKKEIDSLKFELEKRIVRAQEGGTIFSLPITGVGDVVQQGGMIVEIAPQKADILLK 453

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A++   Q   ++KG    ++F  Y           + KI P    Q+ +      YE+ +
Sbjct: 454 AEMATTQSGSLQKGMAVKMKFDAYPFQDYGVVDGSLIKISPTTKMQETSQGRVAIYELEI 513

Query: 392 KITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +        N  I LR G  A      +   +   I+ P 
Sbjct: 514 HLNQTCIPSANDCIPLRPGDTATAEVVVRQRRIIDFILDPF 554


>gi|330954285|gb|EGH54545.1| secretion protein [Pseudomonas syringae Cit 7]
          Length = 418

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/430 (14%), Positives = 143/430 (33%), Gaps = 53/430 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S++    ++++  I +  +          ++SG +L E  ++ I +P +G++    + 
Sbjct: 24  PVSMRLAAAVALLFCICMGLFLTFATYTKRTAASGVVLPEKGLIRIYAPQAGVVNNLGIS 83

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +     L+                                       D        
Sbjct: 84  EGQPVNADAVLMALSS-----------------------------------DTQNGEAGG 108

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            +  +   + +   + ++  +  ++   + L+ K  ++ ++   +  +  +  L R  L+
Sbjct: 109 AQRAISLSIKRRQESLTQEIDKTLALHQQELEGKKRQVEALETEQQKILAQIDLARQRLA 168

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +       NL  ++ VS++ L ++E     + L++R    E    L  +         
Sbjct: 169 LTKGIAERYANLQRQDYVSRDQLQEKE----DAVLDMRLRGEELNRSLLTVRAESTRLRA 224

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E        S+ L   QR  A+   +L   E  RE   I +P AG        S+ +   
Sbjct: 225 ELVELPFNHSKQLADLQRRLAENQDQLVESETKRE-VLITAPTAGEATAIAV-SNGSRVD 282

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            ++PL+ IVP +   +    +  + +  V+ G T  +R+  Y   R       +  I   
Sbjct: 283 SARPLLSIVPANAKLHAELYLPSRSVGFVRAGDTVMLRYQAYPYQRFGLQPGRVSSISRT 342

Query: 374 ISQQDNNLQ----------TQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTT 421
               +  +              +Y V + +             LR+G   +     +   
Sbjct: 343 ALPAEEVMTLGNVSEQMREQGPFYRVTVALASQVIEGQGKRERLRSGMQLDADIMQEKLP 402

Query: 422 LAQEIIHPIT 431
           L + ++ P+ 
Sbjct: 403 LYEWLLEPLR 412


>gi|167646982|ref|YP_001684645.1| HlyD family secretion protein [Caulobacter sp. K31]
 gi|167349412|gb|ABZ72147.1| putative HlyD family secretion protein [Caulobacter sp. K31]
          Length = 179

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 5/167 (2%)

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L + Q        +LT          + +P  G I   Q  +     + + PLM   P  
Sbjct: 5   LTEAQANRRPRGEELTKASDKAGLTVLTAPQDGVIQQMQVHTLGGVVKPADPLMVPAPRG 64

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               I A+V  +    V +G +  ++   Y   R      +IE I     Q +       
Sbjct: 65  GELIIEARVQNRDAGFVHEGQSVEIKLEAYPFTRYGVVHGVIEHIGRNAVQDEKEG---P 121

Query: 386 YYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +  ++K++   +      + L  G  A V        +   ++ P+
Sbjct: 122 VFPAMVKLSQPWIMVEGRRLMLAPGLAATVEIKTGERRIIGFLLSPL 168


>gi|223933760|ref|ZP_03625732.1| secretion protein HlyD family protein [Streptococcus suis 89/1591]
 gi|223897564|gb|EEF63953.1| secretion protein HlyD family protein [Streptococcus suis 89/1591]
          Length = 467

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 72/448 (16%), Positives = 148/448 (33%), Gaps = 34/448 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +  PA    +   ++  +I     S  LP    V + G  +       + +  +G I   
Sbjct: 18  KRPPAYAFILIFSTLATLIIAFAVSAYLPKNYIVKARGTSVITG-TEYVSALSNGKIVTL 76

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
             + G  +  G  +L+    +     +     +  L+      +     LN K + +   
Sbjct: 77  HKKEGDSVKAGEVILSLSSGQEGLQTESLTKQLDKLKAKESLFQKYEQSLNEKVNYMA-- 134

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             S EEQ      +Y+ +     NY   S Y  L+ + T++  +   +  LE   S  ++
Sbjct: 135 -NSGEEQEYYGKVEYYLSQLSSENYNDGSQYAKLQEEYTKLNKLVAEKSQLETDLSSYQS 193

Query: 191 LLSSHQKDLTMM----------------------------KNLFEKNAVSQNDLNQQERI 222
            L++ + +L  +                            + L  K +  +  +      
Sbjct: 194 QLANLEAELATLSVQETAETNSDSETSSSSVDTSSNSIQLEQLNAKISEVKIKIETTTSS 253

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           +     E+       + M R  N+   +A   +A  + E+      N ++  +  + L I
Sbjct: 254 IQGKGTEIESLQSSIREMERSYNDPTSQAYNTYAQLISELGTARAANNKSITELEANLGI 313

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                   T+ +   GT+ Y          QQ+Q + +I    +  Y+ A V    I  V
Sbjct: 314 ATGQDRGLTVSASSDGTLHYVTPLKQGMSVQQNQTVAEIAGSDREAYVEAFVLATDISRV 373

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             G    +        +    K  + +ID     Q+       +Y+V++ + +L    + 
Sbjct: 374 TVGAEVDIAITGVNSQKFGTLKGAVTQIDSGTITQETQNGNVSFYKVVVALEELTLKKDE 433

Query: 403 --IELRNGFPAEVLFTAKNTTLAQEIIH 428
             + L+   P E      N T    I+ 
Sbjct: 434 EIVVLQKDMPVEARIVYDNETYLDWILE 461


>gi|58581395|ref|YP_200411.1| membrane-fusion protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58425989|gb|AAW75026.1| membrane-fusion protein [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 471

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/426 (12%), Positives = 139/426 (32%), Gaps = 56/426 (13%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           AS   +   S++  + + T++         + +G+++    +  + +P +G++ +  V  
Sbjct: 89  ASAAGIVAASVVVFLCMGTYAHRS------AVTGQLVPIKGLATVMAPATGVVSRLDVSE 142

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G  L                         +   ++ LD  +             
Sbjct: 143 GQPVKAGQML-----------------------AVVAVPRATLDSGDT------------ 167

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +  L   L K            +  +    +    ++ ++    + ++ + +  R  ++ 
Sbjct: 168 QAALQHQLRKRGEGVKSSEQAQLQQLDAQEQGLRAQLANLRQELMQVDAEIATRRNQIAL 227

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             + L   + L +   VS   + QQE    + T +++    +   M R   ++  +  + 
Sbjct: 228 ANEVLQRWRQLQDDKYVSVLQIKQQESTALEYTSQMQALQRQATEMRRSAAQIEQQLRVL 287

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                      ++ + R  A  + +  +  +      + +P+AG +V  Q        Q 
Sbjct: 288 PGQ-----RGGVQADYRRDAAAVEQEQVQTQVNGALVVTAPVAG-VVATQMAKPGQAIQL 341

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            QPL+ +VP          V  + I  +  G T  +R+  +   +    +  + +I    
Sbjct: 342 GQPLLSVVPGDGRLEAELLVPSRAIGFIAPGDTVLLRYQAFPYQKFGHQQGRLSRISRSA 401

Query: 375 SQQD-------NNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQE 425
                      N  Q + YY V + +   +         L+ G   +     +   L + 
Sbjct: 402 LSSSELGALIGNVQQGEPYYRVTVGLGRQSVMAYGKPEMLKPGMLLQADIIGERRKLIEW 461

Query: 426 IIHPIT 431
           +  P+ 
Sbjct: 462 VFEPLL 467


>gi|107103659|ref|ZP_01367577.1| hypothetical protein PaerPA_01004729 [Pseudomonas aeruginosa PACS2]
 gi|254242827|ref|ZP_04936149.1| hypothetical protein PA2G_03593 [Pseudomonas aeruginosa 2192]
 gi|126196205|gb|EAZ60268.1| hypothetical protein PA2G_03593 [Pseudomonas aeruginosa 2192]
          Length = 418

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/419 (14%), Positives = 139/419 (33%), Gaps = 63/419 (15%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++G   +            SG+++     V++ +P +GI+ +  V+ G  + +G  L+  
Sbjct: 40  VVGFFLFGSYTKRSTV---SGQLVPASGQVKVHAPQAGIVLRKFVQEGQAVRRGERLMVL 96

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                       +  I      ++  + +L                     L+ L +   
Sbjct: 97  SSERYGSDAGPVQAGISR---RLEQRRDSL------------------RDELEKLRRLQD 135

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                    ++S+ R L                L  ++   R LL+         + L +
Sbjct: 136 DERDSLTSKVASLQRELTT--------------LAAQTDSQRRLLALASDAAARYQGLMD 181

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISR 264
           K  +S + L Q++  +      L+    E+ ++ + + E  +E        AN L E  R
Sbjct: 182 KGYISMDQLQQRQAELLGQRQTLQGLERERTSLRQQLTERRNELAGLSARQANQLAETRR 241

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L   ++  A+  +K T+L        + +P +G      +  +      S+PL+ IVP 
Sbjct: 242 QLSAVEQDLAESEAKRTLL--------VTAPESGIATAVLA-EAGQTVDSSRPLLSIVPA 292

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN----- 379
                       K I  ++ G    +R+  Y   +  ++   ++ I              
Sbjct: 293 DTPLQAELYAPSKSIGFIRPGDAVLIRYQAYPYQKFGQYHGKVQSISRASVSYAELSSMV 352

Query: 380 ------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                     ++ Y + + + D A +       L++G   +         L + ++ P+
Sbjct: 353 GGVPGLGQDGEQLYRLRVTLDDQAVTAYGQPRPLQSGMLLDADILQDTRRLYEWVLEPL 411


>gi|330987669|gb|EGH85772.1| secretion protein [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 418

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/430 (14%), Positives = 145/430 (33%), Gaps = 53/430 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S++    ++++  I +  +          ++SG +L E  ++ I SP +G+I +  + 
Sbjct: 24  PLSMRLAAAVALLFCISMGLFLTFATYTKRTAASGVLLPETGLIRIYSPQAGVITRLDIV 83

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L+                                       D        
Sbjct: 84  EGQHVTDGAVLMALSS-----------------------------------DTQSGEAGG 108

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            +  +   + +   + ++  +  ++   + L+ K  ++ ++   +  +  +  L R  L+
Sbjct: 109 AQRAISLSIKRRQESLAQEIDETLALHLQELEGKKRQVAALETEQQKILAQIDLTRQRLA 168

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +       NL  ++ VS++ L +++     + L++R    E    L  +         
Sbjct: 169 LTKGLAERYANLQRQDYVSRDQLQEKQ----DAVLDMRLRGEELNRSLLTVRAESTRLRA 224

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E        S+ L   +R  A+   +L   E  RE   I +P  G        S+ +   
Sbjct: 225 ELVELPFNQSKQLADLRRRLAENQDRLIESETKRE-IFITAPTLGEATAIAV-SNGSRVD 282

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            ++PL+ IVP     +    +  + +  V+ G T  +R+  Y   R       +  I   
Sbjct: 283 STRPLLSIVPADAKLHAELYLPSRSVGFVRTGDTVMLRYQAYPYQRFGLQPGRVSSISRT 342

Query: 374 ISQQDNNLQ----------TQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTT 421
               D  +              +Y V + +   A     +   LR+G   +     +   
Sbjct: 343 ALPADEVMTLGNVSEPMREQGPFYRVTVALASQAIDGQGMHERLRSGMQLDADIMQERLP 402

Query: 422 LAQEIIHPIT 431
           L + ++ P+ 
Sbjct: 403 LYEWMLEPLR 412


>gi|260435789|ref|ZP_05789759.1| secretion protein HlyD family protein [Synechococcus sp. WH 8109]
 gi|260413663|gb|EEX06959.1| secretion protein HlyD family protein [Synechococcus sp. WH 8109]
          Length = 388

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/416 (14%), Positives = 135/416 (32%), Gaps = 81/416 (19%)

Query: 17  LKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             R T   ++G     + W  +   +  VS +G++    +V E++ P  GI  K  V++G
Sbjct: 36  WMRTTTWGLMGTATFAVAWLAIAKTDEIVSVTGKLEPLGSVQEVQMPTGGIASKILVKDG 95

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
                       +++   D++         +R   +  +  L+ L     +  +  E ++
Sbjct: 96  ------------DEVNAGDIV---------MRLDGEATEQRLNSLQESKKLKTQQLELKQ 134

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L  +L                                         ++  L   L   
Sbjct: 135 LELSQYLLLNDE------------------------------------ETKTLNNNLKLQ 158

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           QK L+  + L E+ A S+    QQ   V ++   L +   ++       N+   +   E 
Sbjct: 159 QKILSRYEILSEQGAASELQYLQQLYRVEETIGSLNQVRVDRMRQQAAQNQQIQQLKAE- 217

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                              +  +++T        + + SP+ G +   +       AQ +
Sbjct: 218 -----------------LQELQAQITEAAVNIRYQALRSPVDGIVFDLKPRGEGYVAQST 260

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + +MKIVP+      R ++  ++I  VK G  A +    +        +  ++ I     
Sbjct: 261 ETVMKIVPYD-TLEARVEIPSREIGFVKVGMPADLSIDSFPATDFGVLEGKVKSIGSDAL 319

Query: 376 QQDNNLQTQEY-YEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEII 427
                    EY Y  ++++        +   + L+ G         +  +  Q ++
Sbjct: 320 PPSQIDNRPEYRYPAMIQLDSQQLKLKDGQELPLQVGMSLTSNIKLRKVSYLQLLL 375


>gi|212640430|ref|YP_002316950.1| bacteriocin/lantibiotic exporter, bacteriocin-binding protein
           [Anoxybacillus flavithermus WK1]
 gi|212561910|gb|ACJ34965.1| Bacteriocin/lantibiotic exporter, bacteriocin-binding protein
           [Anoxybacillus flavithermus WK1]
          Length = 552

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 77/536 (14%), Positives = 169/536 (31%), Gaps = 118/536 (22%)

Query: 7   KNLKRNHPASLKRMTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + L    P     + + L  + +I LI W+    +++   +   +   +NV  I++  S 
Sbjct: 15  RELLEAKPHPFVPIFISLLCLFVISLILWAYFGEMDVVAKAKAVVRPNENVSTIQTSVSS 74

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIE-------TTDLIDLKKVSIKNL------------ 106
            IK+     G ++  G  LL  +  E            +  K  ++ L            
Sbjct: 75  KIKRVNYVQGKKVQVGDVLLELDASELDVQKQVVEQQFEQAKEELEQLRTFKKSVEQHRN 134

Query: 107 ---------------------RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                                +   +  +  L  +    ++     E++E++ + F  + 
Sbjct: 135 LFKKNNNDYYEAYMKYVVDYEKLSGELRQIRLGLMKETQELHRSQNEAKEKEQVLFATQR 194

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL--RALLSSHQKDLTMMK 203
               +    Y  +   R +   L R+   YL   +    ++ +     +  HQ    + K
Sbjct: 195 EQKITIQSLYEETERLRDVIQNLQRLEKSYLENKNYVASATSVYANQYIDFHQTVFKLQK 254

Query: 204 NLFEK------------NAVSQNDL--NQQERIVYKSTLE------LRENIHEQKNMLRH 243
            L +K              + ++ +  ++ E  + K  LE      L+    E +   + 
Sbjct: 255 ALQQKKDEYNRFVFLGEQYIPKSKIEQSRIEYEMAKLDLENYINGKLQSVRLEIERNKQK 314

Query: 244 INEL----------------------------------YDEANLEFA-----------NY 258
           +NEL                                  Y E +L+             + 
Sbjct: 315 LNELTIQLQKLKNANTIEPQLQGIQLLKNDLQQKTKSLYQEISLQQELEEISLAKFKTDK 374

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L EI+  ++Q ++   D   K   +E       I++PI G +   +  +  +    + P+
Sbjct: 375 LVEINEAIKQQEKLVKDLEGKKKDIEVQLRNYRIIAPINGVVNIIKDVNEGDIIHPNDPI 434

Query: 319 MKIVPHSK---LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + ++P  +      I   V  K I  +K G  A   F         + +  I +I    +
Sbjct: 435 LTVIPDRQSQYKMII--YVLNKDISKMKVGDKANYHFAALPYREYGEIEGRIVRISTDST 492

Query: 376 QQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
              N      YY V   + + +         +++ G  AE +    +  +   ++ 
Sbjct: 493 --VNPEDGISYYIVEATVPNESLQSYKGKKAKIKVGMQAEAIVVTDSKKILHYLLE 546


>gi|285019315|ref|YP_003377026.1| membrane fusion transmembrane protein [Xanthomonas albilineans GPE
           PC73]
 gi|283474533|emb|CBA17034.1| probable membrane fusion transmembrane protein [Xanthomonas
           albilineans]
          Length = 414

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/396 (12%), Positives = 124/396 (31%), Gaps = 50/396 (12%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +G+++    +  + +P +G++ + +V  G ++  G  L        T           
Sbjct: 56  TVTGQLVPIKGLATVMAPATGVVSRLEVSEGQRVKAGQMLAVVTVPRAT----------- 104

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                                         E  L   L +            +  +    
Sbjct: 105 ------------------------LGSGDTEAALQHQLRQRGEGLKSSEQARLQQLDAQE 140

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           +    ++ ++    + ++ + +  R  ++   + L   + L +   VS   + QQE    
Sbjct: 141 QGLRAQLANLRQELVQVDAEVATRRNQIALANEVLQRWRQLQDDKYVSVLQIKQQESSAL 200

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           + T +++    +   M R   ++  +  +            ++ + R  A  + +  +  
Sbjct: 201 EYTSQMQALQRQATEMRRSAAQIEQQLRVLPGQ-----RGGVQADYRRDAAAVEQEQVQT 255

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           +      + +P+AG +V  Q        Q  QPL+ +VP          V  + I  +  
Sbjct: 256 QVNGALVVTAPVAG-VVATQMAKPGQAIQLGQPLLSVVPGDGRLEAELLVPSRAIGFIAP 314

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQD-------NNLQTQEYYEVILKITDLA 397
           G    +R+  +   +    +  + +I               N  Q + YY V + +   +
Sbjct: 315 GDNVLLRYQAFPYQKFGHQQGHLSRISRSALSSSELGALIGNAQQGEPYYRVTVALGRQS 374

Query: 398 F--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
                    L+ G   +     +   L + +  P+ 
Sbjct: 375 VMAYGKPEMLKPGMLLQADIIGERRRLIEWVFEPLL 410


>gi|71276532|ref|ZP_00652807.1| colicin V secretion protein [Xylella fastidiosa Dixon]
 gi|71900727|ref|ZP_00682849.1| colicin V secretion protein [Xylella fastidiosa Ann-1]
 gi|170729756|ref|YP_001775189.1| colicin V secretion protein [Xylella fastidiosa M12]
 gi|71162709|gb|EAO12436.1| colicin V secretion protein [Xylella fastidiosa Dixon]
 gi|71729497|gb|EAO31606.1| colicin V secretion protein [Xylella fastidiosa Ann-1]
 gi|167964549|gb|ACA11559.1| colicin V secretion protein [Xylella fastidiosa M12]
          Length = 420

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/429 (14%), Positives = 147/429 (34%), Gaps = 56/429 (13%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     +   S +  + ++ +  +       + +G+++    +V + +P +G++   +V 
Sbjct: 26  PIKAWLLVFASSVMALLVVVFLCVGTYTRRSTVTGQLVPSKGLVTVVAPATGMVSHIKVS 85

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G+  L G  L       TT        +I+ L   +   K  L                
Sbjct: 86  EGANALSGQILALVTVPRTTLASGD---AIRALEQQLQERKQGLSM-------------- 128

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                           ++V +   S +   L      +  I       E + +  +  + 
Sbjct: 129 -----------GQQAQAQVLSAQTSGIEAQLSAAQRELAQI-------EIEIATRQKQIQ 170

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ---KNMLRHINELYDE 250
              + L  +K L +   V    + QQE  V   T +++    +    +  +  + +   E
Sbjct: 171 IANETLQRLKQLEDARYVGTLQIKQQESTVLDYTSQMQAMQRQAMMTRRSIAQLQQSLRE 230

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              ++ N      R+L Q        + +  +  + R   +++SPI G +   Q   S  
Sbjct: 231 LPGQYQNSQATYRRELAQ--------LEQEKVETEARGALSVVSPIDGIVAT-QIVKSQQ 281

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q  QP++ ++P +        +    I  +++G    +R+  Y   +    +  + +I
Sbjct: 282 TVQAGQPMLSLLPVNGELEAELLLPSSAIGFIEQGDEVRLRYQAYPYQKFGHQRGQVSRI 341

Query: 371 DPIISQQD-------NNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                          N  QT+ YY V++K+   + +    +  L+ G   +    ++   
Sbjct: 342 SRSALTSSELAALIGNTQQTEPYYRVVVKLPQQSITVYGRHEPLKPGMLIDADILSEKRR 401

Query: 422 LAQEIIHPI 430
           L + I  P+
Sbjct: 402 LIEWIFEPL 410


>gi|169344336|ref|ZP_02865311.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium perfringens C str. JGS1495]
 gi|169297521|gb|EDS79626.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium perfringens C str. JGS1495]
          Length = 500

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 69/487 (14%), Positives = 166/487 (34%), Gaps = 72/487 (14%)

Query: 7   KNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +    + P  L  + L  II  I+    WS     EI V  +G +  ++ +  + +   G
Sbjct: 15  RQAMESKPNKLMFIFLYIIIALIVTFFIWSWFSEKEIIVKVNGVVRPDNEIKAVSNIVQG 74

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            ++  +++NG  + +G  L   +  E    ++ KK  I     +I+T+   L+ LN   +
Sbjct: 75  EVESVKMKNGESVSKGEVLFKIKSTE----LENKKNQIDEQIEYINTDNENLEKLNKSIN 130

Query: 126 VLEKAFESREEQL----------------LDFLGKYHSTCSKVFNY--GISSVYRSLKMK 167
                FE+ +++                  +      S+  ++ N    + ++ +S+   
Sbjct: 131 DNTNYFENNDKEKEYYYKFQSYEAGNKVSFEEKNNIFSSKDELNNQKVELETLSKSISEN 190

Query: 168 -----------------LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                            ++    I      LEN    L   +  + K+   + +   K  
Sbjct: 191 KNLNKEGSTYSDQYESYISSREMIQNKIEQLENNKKALNEKIEENNKEKNKLNDENRKTI 250

Query: 211 VSQNDLNQQERIVYKSTLELREN-----------IHEQKNMLRHINELYDEANLEFAN-- 257
           +   D  Q    + +  LE++ N           + + K  +  IN+  ++     ++  
Sbjct: 251 IDDKD-KQINNQISQIDLEIKNNNEQLDKLKSDTLAQIKGSIDKINQNLNKLESTLSSLD 309

Query: 258 -------------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                        +L +I   +  N +   +       +E+  E+ ++ +P  G +  N 
Sbjct: 310 ESANISKDKNKTTFLAQIEEKININNQKKKELEEGKEQIEQNIEKCSVKAPSDGKLNINA 369

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +       Q    +  I+P+S    ++  +  K I ++K        F            
Sbjct: 370 NLEQGIVLQTGAVVANIIPNSDTYKVKLMIPTKDIANIKVSEDVKYSFEALPYREYGFLD 429

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTT 421
             IE + P    + ++ +   ++     ++  +   N  E   +++G   E     +   
Sbjct: 430 GKIESLSPDS--KLDSEKGISFFIGEGSLSSDSLYSNKGEESFIKSGMICEAKIITRKEK 487

Query: 422 LAQEIIH 428
           +   ++ 
Sbjct: 488 MLYYLLE 494


>gi|15599337|ref|NP_252831.1| secretion protein [Pseudomonas aeruginosa PAO1]
 gi|313109588|ref|ZP_07795539.1| putative secretion protein [Pseudomonas aeruginosa 39016]
 gi|9950348|gb|AAG07529.1|AE004831_1 probable secretion protein [Pseudomonas aeruginosa PAO1]
 gi|310882041|gb|EFQ40635.1| putative secretion protein [Pseudomonas aeruginosa 39016]
          Length = 418

 Score =  133 bits (336), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 61/419 (14%), Positives = 139/419 (33%), Gaps = 63/419 (15%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++G   +            SG+++     V++ +P +GI+ +  V+ G  + +G  L+  
Sbjct: 40  VVGFFLFGSYTKRSTV---SGQLVPASGQVKVHAPQAGIVLRKFVQEGQAVRRGERLMVL 96

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                       +  I      ++  + +L                     L+ L +   
Sbjct: 97  SSERYGSDAGPVQAGISR---RLEQRRDSL------------------RDELEKLRRLQD 135

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                    ++S+ R L                L  ++   + LL+         + L +
Sbjct: 136 DERDSLTSKVASLQRELTT--------------LAAQTDSQQRLLALASDAAARYQGLMD 181

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISR 264
           K  +S + L Q++  +      L+    E+ ++ + + E  +E        AN L E  R
Sbjct: 182 KGYISMDQLQQRQAELLGQRQTLQGLERERTSLRQQLTERRNELAGLSARQANQLAETRR 241

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L   ++  A+  +K T+L        + +P +G      +  +      S+PL+ IVP 
Sbjct: 242 QLSAVEQDLAESEAKRTLL--------VTAPESGIATAVLA-EAGQTVDSSRPLLSIVPA 292

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN----- 379
                       K I  ++ G    +R+  Y   +  ++   ++ I              
Sbjct: 293 DTPLQAELYAPSKSIGFIRPGDAVLIRYQAYPYQKFGQYHGKVQSISRASVSYAELSSMV 352

Query: 380 ------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                     ++ Y + + + D A +       L++G   +         L + ++ P+
Sbjct: 353 GGVPGLGQDGEQLYRLRVTLDDQAVTAYGQPRPLQSGMLLDADILQDTRRLYEWVLEPL 411


>gi|296387300|ref|ZP_06876799.1| putative secretion protein [Pseudomonas aeruginosa PAb1]
          Length = 418

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 61/419 (14%), Positives = 139/419 (33%), Gaps = 63/419 (15%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++G   +            SG+++     V++ +P +GI+ +  V+ G  + +G  L+  
Sbjct: 40  VVGFFLFGSYTKRSTV---SGQLVPASGQVKVHAPQAGIVLRKFVQEGQAVRRGERLMVL 96

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                       +  I      ++  + +L                     L+ L +   
Sbjct: 97  SSERYGSDAGPVQAGISR---RLEQRRDSL------------------RDELEKLRRLQD 135

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                    ++S+ R L                L  ++   + LL+         + L +
Sbjct: 136 DERDSLTSKVASLQRELTT--------------LAAQTDSQQRLLALASDAAARYQGLMD 181

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISR 264
           K  +S + L Q++  +      L+    E+ ++ + + E  +E        AN L E  R
Sbjct: 182 KGYISMDQLQQRQAELLGQRQTLQGLERERTSLRQQLTERRNELAGLSARQANQLAETRR 241

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L   ++  A+  +K T+L        + +P +G      +  +      S+PL+ IVP 
Sbjct: 242 QLSTVEQDLAESEAKRTLL--------VTAPESGIATAVLA-EAGQTVDSSRPLLSIVPA 292

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN----- 379
                       K I  ++ G    +R+  Y   +  ++   ++ I              
Sbjct: 293 DTPLQAELYAPSKSIGFIRPGDAVLIRYQAYPYQKFGQYHGKVQSISRASVSYAELSSMV 352

Query: 380 ------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                     ++ Y + + + D A +       L++G   +         L + ++ P+
Sbjct: 353 GGVPGLGQDGEQLYRLRVTLDDQAVTAYGQPRPLQSGMLLDADILQDTRRLYEWVLEPL 411


>gi|71733692|ref|YP_273075.1| secretion protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71554245|gb|AAZ33456.1| probable secretion protein PA4142 [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 403

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 64/430 (14%), Positives = 144/430 (33%), Gaps = 53/430 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S++    ++++  I +  +          ++SG +L E  ++ I SP +G+I +  + 
Sbjct: 9   PLSMRLAAAVALLFCISMGLFLTFATYTKRTAASGILLPETGLIRIYSPQAGVITRLDIV 68

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L+                                       D        
Sbjct: 69  EGQHVTDGAVLMALSS-----------------------------------DTQSGEAGG 93

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            +  +   + +   + ++  +  ++   + L+ K  ++ ++   +  +  +  L R  L+
Sbjct: 94  AQRAISLSIKRRQESLAQEIDETLALHLQELEGKKRQVAALETEQQKILAQIDLTRQRLA 153

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +       NL  ++ VS++ L +++     + L++R    E    L  +         
Sbjct: 154 LTKGLAERYANLQRQDYVSRDQLQEKQ----DAVLDMRLRGEELNRSLLTVRAESTRLRA 209

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E        S+ L   +R  A+   +L   E  RE   I SP  G        S+ +   
Sbjct: 210 ELVELPFNQSKQLADLRRRLAENQDRLIESETKRE-IFITSPTLGEATAIAV-SNGSRVD 267

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            ++PL+ IVP     +    +  + +  V+ G T  +R+  Y   R       +  I   
Sbjct: 268 STRPLLSIVPADAKLHAELYLPSRSVGFVRTGDTVMLRYQAYPYQRFGLQPGRVSSISRT 327

Query: 374 ISQQDNNLQ----------TQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTT 421
               D  +              +Y V + +         +   LR+G   +     +   
Sbjct: 328 ALPADEVMTLGNVSEPMREQGPFYRVTVALASQTIDGQGMHERLRSGMQLDADIMQERLP 387

Query: 422 LAQEIIHPIT 431
           L + ++ P+ 
Sbjct: 388 LYEWMLEPLR 397


>gi|15837818|ref|NP_298506.1| colicin V secretion protein [Xylella fastidiosa 9a5c]
 gi|9106190|gb|AAF84026.1|AE003955_7 colicin V secretion protein [Xylella fastidiosa 9a5c]
          Length = 420

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 66/429 (15%), Positives = 155/429 (36%), Gaps = 56/429 (13%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + L S +  + ++ +  +       S +G+++    +V + +P +G++ + +V 
Sbjct: 26  PIKAWLLVLASSVMALLVVVFLYVGTYTRRSSVTGQLVPSKGLVTVVAPATGMVSQIKVS 85

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G+  L G  L          L+ + + ++ +                       +A E 
Sbjct: 86  EGANALSGQIL---------ALVTVPRTTLASGDA-------------------TRALEQ 117

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           + ++    L       ++V +   S +   L      +  I       E + +  +  + 
Sbjct: 118 QLQERKQGLSMGQQAQAQVLSAQTSGIEAQLSAAQRELAQI-------EIEIATRQKQIQ 170

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ---KNMLRHINELYDE 250
              + L  +K L +   V    + QQE  V   T +++    +    +  +  + +   E
Sbjct: 171 IANETLQRLKQLEDARYVGTLQIKQQESTVLDYTSQMQAMQRQAIMTRRSIAQLQQSLRE 230

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              ++ N      R+L Q        + +  +  + R   +++SPI G +   Q   S  
Sbjct: 231 LPGQYQNSQATYRRELAQ--------LEQEKVETEARGALSVVSPIDGIVAT-QIVKSQQ 281

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q  QP++ ++P +        +    I  +++G    +R+  Y   +    +  + +I
Sbjct: 282 TVQAGQPMLSLLPVNGELEAELLLPSSAIGFIEQGDEVRLRYQAYPYQKFGHQRGQVSRI 341

Query: 371 DPIISQQD-------NNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                  +       N  QTQ YY VI+K+   + +    +  L+ G   +    ++   
Sbjct: 342 TRSALTSNELGALIGNTQQTQPYYRVIVKLPQQSITVYGRHEPLKPGMLIDADILSEKRR 401

Query: 422 LAQEIIHPI 430
           L + I  P+
Sbjct: 402 LIEWIFEPL 410


>gi|116052178|ref|YP_788978.1| putative secretion protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115587399|gb|ABJ13414.1| putative secretion protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 418

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 61/419 (14%), Positives = 139/419 (33%), Gaps = 63/419 (15%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++G   +            SG+++     V++ +P +GI+ +  V+ G  + +G  L+  
Sbjct: 40  VVGFFLFGSYTKRSTV---SGQLVPASGQVKVHAPQAGIVLRKFVQEGQAVRRGERLMVL 96

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                       +  I      ++  + +L                     L+ L +   
Sbjct: 97  SSERYGSDAGPVQAGISR---RLEQRRDSL------------------RDELEKLRRLQD 135

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                    ++S+ R L                L  ++   + LL+         + L +
Sbjct: 136 DERDSLTSKVASLQRELTT--------------LAAQTDSQQRLLALASDAAARYQGLMD 181

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISR 264
           K  +S + L Q++  +      L+    E+ ++ + + E  +E        AN L E  R
Sbjct: 182 KGYISMDQLQQRQAELLGQRQTLQGLERERTSLRQQLTERRNELAGLSARQANQLAETRR 241

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L   ++  A+  +K T+L        + +P +G      +  +      S+PL+ IVP 
Sbjct: 242 QLSAVEQDLAESEAKRTLL--------VTAPESGIATAVLA-EAGQTVDSSRPLLSIVPA 292

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN----- 379
                       K I  ++ G    +R+  Y   +  ++   ++ I              
Sbjct: 293 DTPLQAELYAPSKSIGFIRPGDAVLIRYQAYPYQKFGQYHGKVQSISRASVSYAELSSMV 352

Query: 380 ------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                     ++ Y + + + D A +       L++G   +         L + ++ P+
Sbjct: 353 GGVPGLGQDGEQLYRLRVTLDDQAVTAYGQPRPLQSGMLLDADILQDTRRLYEWVLEPL 411


>gi|110802104|ref|YP_698405.1| bacteriocin ABC transporter bacteriocin-binding protein
           [Clostridium perfringens SM101]
 gi|110682605|gb|ABG85975.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
           [Clostridium perfringens SM101]
          Length = 500

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 66/482 (13%), Positives = 170/482 (35%), Gaps = 62/482 (12%)

Query: 7   KNLKRNHPASLKRMTLLSII-GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  + P  L  + L  II  I+    W+     EI V  +G +  ++ +  I +   G
Sbjct: 15  REVMESKPNKLMFIFLYIIISLIVTFFIWAWFSEKEIVVKVNGVVRPDNEIQAISNIVQG 74

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I+  +++NG  + +G  L   +  E  D  +     I+ +    +  +     +N+  +
Sbjct: 75  EIESVKMKNGENVSKGEVLFKIKSTELEDKKNQLDQQIEYINTDNENLEKLNKSINDNTN 134

Query: 126 VLE------------KAFESREEQLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKL--- 168
             E            +++E+  +  ++      S+   + N    + ++ RS+       
Sbjct: 135 YFENNDKEKEYYYKFQSYEAGNKVSIEEKNNISSSKDDLNNEKDDLETLSRSISENKNLN 194

Query: 169 -------TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM----MKNLFEKNA------- 210
                  ++  S   +R  ++NK+  L     +  +++ +       L ++N+       
Sbjct: 195 KEGSAYSSQYESYVSSREMIQNKTEQLENSKKALSEEIEVNNKEKNKLSDENSKAIIDDK 254

Query: 211 -------VSQNDLN------QQERIVYKSTLELRENIHEQKNMLRH----INELYDEANL 253
                  +SQ DL       Q +++   +  +++ +I +    L      I+ L + AN+
Sbjct: 255 NKQINNQISQIDLEIKNNNEQLDKLKSDTLAQIKGSIDKINQSLSKLDSNISSLDESANI 314

Query: 254 EFANYLKEISRDLEQ----NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                   +   +E+    N +   +       +E++ E+ ++ +P  G +  N +    
Sbjct: 315 AKDKNKTTVLAQIEEKININNQKKKELEENKKQIEQSIEKCSVKAPSDGKLNINANLEQG 374

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              Q    +  I+P+S    +   +  K I ++K        F              IE 
Sbjct: 375 IMLQTGAVVASIIPNSDTYKVELMIPTKDIANIKVSEDVKYSFEALPYREYGFLDGKIES 434

Query: 370 IDPIISQQDNNLQTQEYYE---VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           + P    + ++ +   ++     +   +  +       ++ G   E     +   +   +
Sbjct: 435 LSPDS--KVDSEKGISFFTGEGSLSSNSLYSNKGEESFIKPGMMCEAKIITRKEKMLYYL 492

Query: 427 IH 428
           + 
Sbjct: 493 LE 494


>gi|218679900|ref|ZP_03527797.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CIAT 894]
          Length = 295

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 93/291 (31%), Gaps = 22/291 (7%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            + +   + R  L    +   +L+ + +  + M   L  K+A +   +    + + +   
Sbjct: 1   AQRQQKEVERDRLVVTVAAQNSLVETLKDRVAMRHALASKDAGTMASVIDATQTLKEQAT 60

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +L        +    I     E +     +L +    L   +R   +   +L      RE
Sbjct: 61  QLAVQEGNLADAAAGIEVFAREKDKLTRTFLSDQLGRLGDAERRVEELEQRLAKARNVRE 120

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           Q T+ SPI GT+  +   S        Q +M++VP      +      K I  +K G  A
Sbjct: 121 QMTLRSPIDGTVQASSITSVGQVVTVGQDVMRVVPEGSALELEVYALNKDIGFIKVGQEA 180

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI------------------ 390
            V+   +   R     A + KI      + +  + +                        
Sbjct: 181 VVKLEAFPFTRYGTIPAHVTKIAADAIPEPDAARREGDPAARQAETTFGGAERMQNLVFP 240

Query: 391 ----LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
               L+   ++    N+EL  G  A          + + +  P+ +   + 
Sbjct: 241 VTLSLETRQISADGRNVELSAGMAAIAEVRTGERRMLEYVFSPLVEVAEEA 291


>gi|28198408|ref|NP_778722.1| colicin V secretion protein [Xylella fastidiosa Temecula1]
 gi|182681050|ref|YP_001829210.1| colicin V secretion protein [Xylella fastidiosa M23]
 gi|28056478|gb|AAO28371.1| colicin V secretion protein [Xylella fastidiosa Temecula1]
 gi|182631160|gb|ACB91936.1| colicin V secretion protein [Xylella fastidiosa M23]
 gi|307579518|gb|ADN63487.1| colicin V secretion protein [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 420

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 64/429 (14%), Positives = 153/429 (35%), Gaps = 56/429 (13%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     +   S +  + ++ +  +       S +G+++    +V + +P +G++ + +V 
Sbjct: 26  PIKAWLLVFASSVMALLVVVFLCVGTYTRRSSVTGQLVPSKGLVTVVAPATGMVSQIKVS 85

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G+  L G  L          L+ + + ++ +                       +A E 
Sbjct: 86  EGANALSGQIL---------ALVTVPRTTLASGDA-------------------IRALEQ 117

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           + ++    L       ++V +   S +   L      +  I       E + +  +  + 
Sbjct: 118 QLQERKQGLSMGQQAQAQVLSAQTSGIEAQLSAAQRELAQI-------EIEIATRQKQIQ 170

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ---KNMLRHINELYDE 250
              + L  +K L +   V    + QQE  V   T +++    +    +  +  + +   E
Sbjct: 171 IANETLQRLKQLEDARYVGTLQIKQQESTVLDYTSQMQAMQRQAIMTRRSIAQLQQSLRE 230

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              ++ N      R+L Q        + +  +  + R   +++SPI G +   Q   S  
Sbjct: 231 LPGQYQNSQATYRRELAQ--------LEQEKVETEARGALSVVSPIDGIVAT-QIVKSQQ 281

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q  QP++ ++P +        +    I  +++G    +R+  Y   +    +  + +I
Sbjct: 282 TVQAGQPMLSLLPVNGELEAELLLPSSAIGFIEQGDEVRLRYQAYPYQKFGHQRGQVSRI 341

Query: 371 DPIISQQD-------NNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                          N  QT+ YY VI+K+   + +    +  L+ G   +    ++   
Sbjct: 342 SRSALTSSELAALIGNTQQTEPYYRVIVKLPQQSITVYGRHEPLKPGMLIDADILSEKRR 401

Query: 422 LAQEIIHPI 430
           L + I  P+
Sbjct: 402 LIEWIFEPL 410


>gi|254237026|ref|ZP_04930349.1| hypothetical protein PACG_03055 [Pseudomonas aeruginosa C3719]
 gi|126168957|gb|EAZ54468.1| hypothetical protein PACG_03055 [Pseudomonas aeruginosa C3719]
          Length = 418

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 61/419 (14%), Positives = 140/419 (33%), Gaps = 63/419 (15%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++G   +            SG+++  +  V++ +P +GI+ +  V+ G  + +G  L+  
Sbjct: 40  VVGFFLFGSYTKRSTV---SGQLVPANGQVKVHAPQAGIVLRKFVQEGQAVRRGERLMVL 96

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                       +  I      ++  + +L                     L+ L +   
Sbjct: 97  SSERYGSDAGPVQAGISR---RLEQRRDSL------------------RDELEKLRRLQD 135

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                    ++S+ R L                L  ++   + LL+         + L +
Sbjct: 136 DERDSLTSKVASLQRELTT--------------LAAQTDSQQRLLALASDAAARYQGLMD 181

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISR 264
           K  +S + L Q++  +      L+    E+ ++ + + E  +E        AN L E  R
Sbjct: 182 KGYISMDQLQQRQAELLGQRQTLQGLERERTSLRQQLTERRNELAGLSARQANQLAETRR 241

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L   ++  A+  +K T+L        + +P +G      +  +      S+PL+ IVP 
Sbjct: 242 QLSAVEQDLAESEAKRTLL--------VTAPESGIATAVLA-EAGQTVDSSRPLLSIVPA 292

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN----- 379
                       K I  ++ G    +R+  Y   +  ++   ++ I              
Sbjct: 293 DTPLQAELYAPSKSIGFIRPGDAVLIRYQAYPYQKFGQYHGKVQSISRASVSYAELSSMV 352

Query: 380 ------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                     ++ Y + + + D A +       L++G   +         L + ++ P+
Sbjct: 353 GGVPGLGQDGEQLYRLRVTLDDQAVTAYGQPRPLQSGMLLDADILQDTRRLYEWVLEPL 411


>gi|124003648|ref|ZP_01688497.1| putative hemolysin secretion transport system membrane protein
           [Microscilla marina ATCC 23134]
 gi|123991217|gb|EAY30669.1| putative hemolysin secretion transport system membrane protein
           [Microscilla marina ATCC 23134]
          Length = 471

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 58/426 (13%), Positives = 152/426 (35%), Gaps = 11/426 (2%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++    +     + L+T S  +     + SS  +  +     I +  SG +K   V++G 
Sbjct: 54  IRWGITIVFFTFMVLLTVSWFMKYPDIIHSSIMVTTKTPPQRILARSSGALK-LMVKDGQ 112

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +     L   ++    +   + K  I   +  ++  +     L     V+ +      E
Sbjct: 113 NVKPQEVLGYIQNPTVFEDYQVLKKQITQFQKILNNRQRGTQDLLAFDKVISQQNLKLGE 172

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
               +     +    +  Y +S     ++   +++        +L ++  +L        
Sbjct: 173 LQGAYESFAKTFRELLLFYELSKPENQIQNLQSQIIQYKKLNQNLLSQQRILGKEFKIFN 232

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                   L E+  +++ + ++ +  + +    L+       N    INEL +       
Sbjct: 233 NQYKADSTLAEEKLMARLEFDKTKASLLQQRRALKNGEASIINNRIRINELQNNIGELTL 292

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            + ++    L      F    S++ I     ++  + +P+ G + +   +S + + +  Q
Sbjct: 293 TFREQERTYLLATNNAFQTLRSQVNI---WIQRYILTTPVEGKVSFLSYWSDNQFVKPEQ 349

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +M ++P +K    +  +       VK G    +RF +Y        +  +E+I  +I+Q
Sbjct: 350 TVMAVIPQNKNLIGKINMPVNGSGKVKVGQVVNIRFANYPADEFGMVEGKVERIS-LIAQ 408

Query: 377 QDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
              + Q    Y + + + +        ++E +     +     K+  L +     I + +
Sbjct: 409 ASADPQKGSMYTINVSLPNGLKTSYKKDLEFKAEMQGQADIITKDLRLIER----IFNQF 464

Query: 435 PKIFER 440
            K+F++
Sbjct: 465 AKLFDQ 470


>gi|282896711|ref|ZP_06304719.1| Secretion protein HlyD [Raphidiopsis brookii D9]
 gi|281198429|gb|EFA73317.1| Secretion protein HlyD [Raphidiopsis brookii D9]
          Length = 432

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 56/427 (13%), Positives = 136/427 (31%), Gaps = 55/427 (12%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             +  ++S  SG +++  V+N   + QG  +   +D +        + SI+  +  +   
Sbjct: 2   GEIKLVESAISGEVQRILVQNHQVVRQGDSMAFVDDSQVNTQKKQLEDSIEKSQLQLLGI 61

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT---- 169
           +S L+ + N+   +       E+ +     ++  T     +  I      L+ ++     
Sbjct: 62  ESQLNEIRNQ---ILDQANLNEQTVFAAQSEFMGTQRNFDDQRIKGNAELLQAEIAFHFA 118

Query: 170 -RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
                    +  L++        L         ++ +    A+  N L ++++ +  +  
Sbjct: 119 KSQLQRLEKQGILKSTIQEAETALKLAILQRDRLQAIARSGAIPANLLEEKQQAIKSARA 178

Query: 229 ELRENIHEQKN--------------------------------MLRHINELYDEANLEFA 256
           +L    +  +                                   + I +      +  A
Sbjct: 179 KLESAKNNAQTLWDDKQQAFKIAQTNLYKARTAMNPSNSAVIIASQRIKQERARGEMTIA 238

Query: 257 NYLKEI---SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              KE+    +   + Q+        L   E   ++  I +PI GT++  +  +     Q
Sbjct: 239 ALNKELGNLLQQRLEIQKQLTRYRQDLLQTEINLQKTVIRAPITGTLLQLKLRNIGQVVQ 298

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q + +I P +    I+A +  ++I  V+ G    +R            +  ++ I P 
Sbjct: 299 SGQAIAQIAPLNVPLEIKAYIPSQEINKVQVGRKFQMRVSACPYPDYGTLRGRVKNISPD 358

Query: 374 I----------SQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTT 421
           +          +    N      YEV ++   L       +  L+ G        ++   
Sbjct: 359 VLSSNVITNNITDNITNTTGINGYEVTMEPETLYLGKGENKCYLQPGMEGGTDIISREEN 418

Query: 422 LAQEIIH 428
           + Q I+ 
Sbjct: 419 VMQFILR 425


>gi|166712907|ref|ZP_02244114.1| Membrane-fusion protein [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 414

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 60/427 (14%), Positives = 143/427 (33%), Gaps = 58/427 (13%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           AS   +   S++  + + T++         + +G+++    +  + +P +G++ +  V  
Sbjct: 32  ASAAGIVAASVVVFLCMGTYAHRS------TVTGQLVPIKGLATVMAPATGVVSRLDVSE 85

Query: 75  GSQILQGTPLLTFE-DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           G  +  G  L        T D  D +      LR   +  KS+                 
Sbjct: 86  GQPVKAGQMLAVVTVPRATLDSGDTQAALQHQLRKRGEGLKSS----------------- 128

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                            +     + +  + L+ +L  +R      + ++ + +  R  ++
Sbjct: 129 ----------------EQAQLQQLDAQEQGLRAQLANLRQ---ELMQVDAEIATRRNQIA 169

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              + L   + L +   VS   + QQE    + T +++    +   M R   ++  +  +
Sbjct: 170 LANEVLQRWRQLQDDKYVSVLQIKQQESSALEYTSQMQALQRQATEMRRSAAQIEQQLRV 229

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                       ++ + R  A  + +  +  +      + +P+AG +V  Q        Q
Sbjct: 230 LPGQ-----RGGVQADYRRDAAAVEQEQVQTQVNGALVVTAPVAG-VVATQMAKPGQAIQ 283

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             QPL+ +VP          V  + I  +  G T  +R+  +   +    + ++ +I   
Sbjct: 284 LGQPLLSVVPGDGHLEAELLVPSRAIGFIAPGDTVLLRYQAFPYQKFGHQQGLLSRISRS 343

Query: 374 ISQQD-------NNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQ 424
                       N  Q + YY V + +   +         L+ G   +     +   L +
Sbjct: 344 ALSSSELGALIGNAQQGEPYYRVTVALARQSVMAYGKPEMLKPGMLLQADIIGERRKLIE 403

Query: 425 EIIHPIT 431
            +  P+ 
Sbjct: 404 WVFEPLL 410


>gi|152985821|ref|YP_001346333.1| auxiliary membrane fusion protein family transporter [Pseudomonas
           aeruginosa PA7]
 gi|150960979|gb|ABR83004.1| auxiliary transport protein, membrane fusion protein family
           [Pseudomonas aeruginosa PA7]
          Length = 418

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 64/419 (15%), Positives = 138/419 (32%), Gaps = 63/419 (15%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           ++G   +            SG+++     V++ +P +GI+ +  VE G  + +G  L+  
Sbjct: 40  VVGFFLFGSYTKRSTV---SGQLVPARGQVKVHAPQAGIVLRKFVEEGQAVRRGERLMVL 96

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                       +  I      ++  + +L                     L+ L +   
Sbjct: 97  SSERYGSDAGPVQAGISR---QLEQRRDSL------------------RDELEKLRRLQD 135

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                    ++S+ R L                L  ++   + LL+         + L +
Sbjct: 136 DERASLASKVASLQRELAT--------------LAAQTDSQQRLLALASDAAARYQGLMD 181

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISR 264
           K  +S + L Q++  +      L+    E+ ++ + + E  +E        AN L E  R
Sbjct: 182 KGYISMDQLQQRQAELLGQRQTLQGLARERTSLEQQLTERRNELAGLSARQANQLAETRR 241

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L   Q+  A+  +K T+L        + +P +G      +  +      S+PL+ IVP 
Sbjct: 242 QLSAVQQDLAESEAKRTLL--------VTAPESGIATAVLA-EAGQTVDSSRPLLSIVPA 292

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN----- 379
                       K I  ++ G    +R+  Y   +  ++   +  I              
Sbjct: 293 DTPLQAELYAPSKSIGFIRPGDAVLIRYQAYPYQKFGQYHGKVRSISRASVSYAELSSMV 352

Query: 380 ------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                     ++ Y + + + D A +       L++G   E         L + ++ P+
Sbjct: 353 GGVPGLGQDGEQLYRLRVTLDDQAVTAYGQPRPLQSGMLLEADILQDTRRLYEWVLEPL 411


>gi|87301647|ref|ZP_01084487.1| possible transporter component [Synechococcus sp. WH 5701]
 gi|87283864|gb|EAQ75818.1| possible transporter component [Synechococcus sp. WH 5701]
          Length = 382

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 65/421 (15%), Positives = 136/421 (32%), Gaps = 81/421 (19%)

Query: 17  LKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             R T   ++G     + W  L   E  VS +G++    +V +I+ P  GI     V+ G
Sbjct: 30  WMRATAWVLMGTTAFAVGWLALAKTEEIVSVTGKLEPIGSVRDIQMPVGGIAASLLVKEG 89

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
                                   +V    +   +DT                       
Sbjct: 90  D-----------------------QVKAGQVVMRLDT----------------------- 103

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                   + +    +     I++  R L +K   +R       D   ++ +L   LS  
Sbjct: 104 --------QSNRQKKRSIEQNIAATQRQLNLKDLELRKFLEMNQD---QALVLDKNLSLQ 152

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +  L   ++L  + A ++    QQ   V ++  +L             ++    +A L+ 
Sbjct: 153 KDILKRYQSLAREGASAELQYLQQFDRVQQTEGQL---------TQTQLDRFRQQAILDQ 203

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A          +Q Q   A   S+L  +E +   + + +P++G +   +  ++   AQ +
Sbjct: 204 AT---------QQLQGQLASLRSELADVEVSLAYQELRAPVSGVVFDLKPKAAGYVAQGT 254

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + +MK+VP +       ++   QI  V  G    +    +        +  + +I     
Sbjct: 255 ESVMKVVPLN-KLEAGVEIPSSQIGFVHVGMPVDLSIDSFPANDFGVLEGTVRQIGSDAL 313

Query: 376 QQDNNLQTQEY-YEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             D   Q ++Y +   + +            + L+ G         +  T  Q ++    
Sbjct: 314 APDRTAQREDYRFPARITLLSQRLKLKTGSYLPLQVGMSLRANIKLRKATYLQLLLGSFR 373

Query: 432 D 432
           D
Sbjct: 374 D 374


>gi|307544636|ref|YP_003897115.1| general secretion protein D [Halomonas elongata DSM 2581]
 gi|307216660|emb|CBV41930.1| K02022 [Halomonas elongata DSM 2581]
          Length = 429

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/427 (13%), Positives = 138/427 (32%), Gaps = 54/427 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             K + + S+I ++ +I + +       V+ SG +L  + +  + +P  G + +  V+ G
Sbjct: 31  PTKILAVTSLIIVVAIIVFLVFGNYTRRVAVSGVMLPTEGLTRVSAPSYGWVTRQHVKKG 90

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L       TT L D ++V  + LR      KS +                  
Sbjct: 91  EDVERGDVLYEINLDSTTALGDTQEVVNQLLRDQKKEIKSEI------------------ 132

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                          +          +  +  L         ++ +  K S      +  
Sbjct: 133 ------------QRHEELAAREKEALKHQRDNLVGEIEQIEEQIQVSEKFSDTLHGYAME 180

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           QK         +K          +     ++ +E RE +   K     +    +    E 
Sbjct: 181 QKKY------MDKGLTPSQAFESR----LQAYMERRETLERLKGQRVRLKSELENVRDEL 230

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           +++    + ++ + +R   D   ++   E +R+   + +P  G +    + +        
Sbjct: 231 SSFDLSSASEVGKLRRQLIDIEKQIAEGE-SRQSIRVTAPRDGVVESISTQA-GQTVSTG 288

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--- 372
            PL+ I+P       +  V    I  + +G    +R+  +   +  ++   + +I     
Sbjct: 289 TPLLTILPDDAQLKAQMLVPNSDIGFLHEGDEVLLRYSAFPYQKFGQYPGTVSRISRAPL 348

Query: 373 -------IISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLA 423
                  ++    +   +   Y + +K          + + L+ G  AE     +   + 
Sbjct: 349 KQDEIKMLVDNGASAPSSTAVYRITVKPDSPFAITYGDRVPLQAGMQAEAHIMVETRPIY 408

Query: 424 QEIIHPI 430
           Q I  P+
Sbjct: 409 QWIFEPL 415


>gi|222528359|ref|YP_002572241.1| hypothetical protein Athe_0328 [Caldicellulosiruptor bescii DSM
           6725]
 gi|222455206|gb|ACM59468.1| hypothetical protein Athe_0328 [Caldicellulosiruptor bescii DSM
           6725]
          Length = 466

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 75/446 (16%), Positives = 160/446 (35%), Gaps = 39/446 (8%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     +T + +  +IGL+ WS++  I+I+V   G +   ++  ++ S   G +K+  V+
Sbjct: 23  PRYGLFITYILLALVIGLVLWSVVGKIDINVKVQGIVRPLEDEAKVVSYVGGKVKEVFVK 82

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD--------------- 118
            G  + +G  L   +D E     D  K  +      ID  K                   
Sbjct: 83  EGEYVKKGDILFKIDDEEYVKRRDFLKQQLSEYEKRIDDLKELRKSIEKGENLGNKNNAY 142

Query: 119 ---------FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN-YGISSVYRSLKMKL 168
                     +N      E+A   RE  ++DF  +  S   K+ N     S  + +K  +
Sbjct: 143 YLRYLSYSYEINKLKKAAEEARVQREYSIMDFKKQMESLDEKIKNIDKFESTLKEIKEVV 202

Query: 169 TRMRSIYLNRLD---LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND--LNQQERIV 223
           ++   + L + D   LE   S +       +  L    N+  +  + + D  L++  +  
Sbjct: 203 SKGEQVKLTKYDIGYLEFILSEIEVYNQQVKTKLDGS-NIHNEILILKIDSKLDELRQSK 261

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +  L+ ++   + K +    ++  +E      + L++I  ++        +    L   
Sbjct: 262 SEIILQKQKIEGQLKLLNISGDDTKEEIEKYKFDVLQQIDNEINNLSSEIKNLKISLEET 321

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL-TYIRAKVTPKQIQHV 342
           E+  E  +I +   G +  +++            + +IV        +   +   +   +
Sbjct: 322 ERLIESCSIRAEKDGYVESSENLLKGAVVNSGAEIGRIVGSGSRGFKVIGYMPNTKGSSI 381

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           + G  A V+F           +  + ++   I     N Q   +YEV +   +       
Sbjct: 382 EIGQNARVKFA--GASNLNVVEGKVVRVSRDIKVATQNGQG--FYEVEV---EAKKVPKG 434

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIH 428
           I LR G   E+   +K   L + ++ 
Sbjct: 435 INLRAGQACEMSIVSKQKRLIEWVLE 460


>gi|78214030|ref|YP_382809.1| leukotoxin secretion protein [Synechococcus sp. CC9605]
 gi|78198489|gb|ABB36254.1| possible similar to leukotoxin secretion protein [Synechococcus sp.
           CC9605]
          Length = 417

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 66/428 (15%), Positives = 131/428 (30%), Gaps = 91/428 (21%)

Query: 15  ASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
               R    ++IG       W  L   E  V + G++    +V +I+ P  G+  +  V+
Sbjct: 53  RFWMRTVTWALIGSTVFGVAWLALARTEEIVVAPGQLEPIGSVQDIQMPVGGVADQILVQ 112

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G                        +V    +   +DTE S                  
Sbjct: 113 EGD-----------------------RVEAGQVLMKLDTEAS------------------ 131

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                                  I      L +K    R+        + +  +L   L+
Sbjct: 132 -------------EEQRNSLEKTIKLKQEQLTLKEEEKRNTMQMN---QEEVVMLENNLA 175

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              + L   + L    A S+    QQ+ IV ++  +L ++  E+   +  +++       
Sbjct: 176 LQAEILERYEQLNAAGAFSEVQYLQQQNIVAETRGKLLQSKAERLRQIALLDQ------- 228

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                         Q +   AD   +L     T   + + SP+ G +   +  S    AQ
Sbjct: 229 -----------QTAQLKSELADLNGRLVESRVTLRYQQLRSPVDGVVFDLKPTSRGFTAQ 277

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY----------TATVRFPHYADIREKKF 363
            +Q +MK+VP       + +V   +I  V+             +A +    +        
Sbjct: 278 STQTVMKVVPMGS-LEAKVEVPSNKIGFVQVPQGCPDDRDACMSADISIDSFPASDFGVL 336

Query: 364 KAIIEKIDPIISQQDNNLQTQE-YYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKN 419
           K  + +I     + D   Q QE  + V +++ D         ++ L+ G         + 
Sbjct: 337 KGKVIRIGSDALEPDPQEQRQELSFPVTIQLDDQQLKLKTGSSLPLQVGMSLTANIKLRK 396

Query: 420 TTLAQEII 427
            +  Q ++
Sbjct: 397 VSYLQLLL 404


>gi|149276671|ref|ZP_01882814.1| probable protein secretion protein, HlyD family [Pedobacter sp.
           BAL39]
 gi|149232340|gb|EDM37716.1| probable protein secretion protein, HlyD family [Pedobacter sp.
           BAL39]
          Length = 400

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/395 (16%), Positives = 126/395 (31%), Gaps = 68/395 (17%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + ++++V S+G         +IK   SG +    ++  + +  G  LLT         
Sbjct: 47  FFVKVDVNVKSTGLFRPVQERTDIKPLISGRVDSVFIKENTHVEAGQVLLTI-------- 98

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                                 + L  + D+LE      + QL D     H+        
Sbjct: 99  --------------------KRESLEGRNDLLELQQSDVDAQLSDLEQLLHAYK------ 132

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                      KL     +Y  +  L   +    R+ L   +K+      L+++ A+S  
Sbjct: 133 -----INDWSKKLKLESGLYGQQYSLFMQRIVEARSRLGLARKNHDRFYYLYQRKAISAV 187

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           + ++ +  +     EL   I E +                           L+  QR   
Sbjct: 188 EYDEVKLKLDNIKNEL-GLIAETQGSRWQTE-----------------LNALKIQQRQLG 229

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
            +  +    ++ R+  T+ +P+ G++   +     +    ++ L +I P          V
Sbjct: 230 AQNEQY---DEERDFYTLRAPVTGSVQQLKGLQPGSLVSANELLAEISP-DSGLIAETYV 285

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
            PK I  +K G  A  +   Y   +    K  +  I   I     N   Q Y++V   + 
Sbjct: 286 LPKDIGLLKTGTKAKFQIDAYNYNQWGMVKGKVISISSDIFMDKGN---QPYFKVRCLLD 342

Query: 395 DLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
               S  N    +++ G   +  F     TL Q +
Sbjct: 343 KHQLSLKNGYVGKIKKGMTLQARFFVTRRTLFQLL 377


>gi|318605667|emb|CBY27165.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 157

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 1/153 (0%)

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           + + Q+++ +P+ G I  +   +       +QPLM +VP S    +   +  K I  V  
Sbjct: 2   EKQRQQSLRAPVDGVIQQSTVHTLGGVVTSAQPLMVLVPESHQLELDVMILNKDIGFVLP 61

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G +  V+   +   R       ++ I     +            + L    L      + 
Sbjct: 62  GQSVEVKVDSFPYTRFGTLSGEVKHISRDAMEDQQQGLVFP-ARIRLNSDTLIVEGKPVR 120

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           L  G             +   ++ P+     + 
Sbjct: 121 LSAGMAVSAEIKTGRRRVIDYLLSPLQQYQSEA 153


>gi|34495524|ref|NP_899739.1| secretion protein [Chromobacterium violaceum ATCC 12472]
 gi|34101379|gb|AAQ57748.1| probable secretion protein [Chromobacterium violaceum ATCC 12472]
          Length = 416

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/426 (13%), Positives = 131/426 (30%), Gaps = 50/426 (11%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           PASL  +T    +  I ++ +  L         +G +L    ++ ++   +G++ + +V 
Sbjct: 25  PASLAWLTGAFTLIAIAIVLFFALASYTRKAQVAGVLLPSQGLIRLQPAQAGVVAEVRVR 84

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G Q+  G  L    +   +         I  L                           
Sbjct: 85  EGQQVRAGDVLFVLGNERESATRGDAGREITAL--------------------------- 117

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                     +  S         + +  +       +   +      ++ +  L R  ++
Sbjct: 118 -------LQSRRDSLAGDQAMLRLQARQKQ-DALRRKAGDLARELQRMDEQIGLQRRRVA 169

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             ++ L   + L E + +S   L  ++        +L     + +     +   +D A  
Sbjct: 170 LAEETLQRHRKLLESHFISAAALQDKQAEAIDQQAKL----ADLQRGRAVLQSDHDAALS 225

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +  +   +  RD    QR  A+    LT  E  R Q  + +P AG +           A 
Sbjct: 226 DLGDLQLQARRDEAAAQRGMAELEQDLTENEAKR-QLLVRAPQAGMVSGIAV-QPGQTAA 283

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q L  + P             +    VK G    +R+  Y   +  +FK  + ++   
Sbjct: 284 AGQTLANLSPAGSPLEAELYAPSRAAGFVKPGMAVLIRYQAYPYQKFGQFKGTVREVSRS 343

Query: 374 ISQQDN-------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQ 424
             + +            +  Y V +++   + +       L+ G   +     +   L +
Sbjct: 344 ALRPEELYLPGGQGGAGEPLYRVRVRLERQSITTYGQAQPLKAGMALDASVLLERRKLYE 403

Query: 425 EIIHPI 430
            ++ P+
Sbjct: 404 WVLEPL 409


>gi|319937612|ref|ZP_08012016.1| hypothetical protein HMPREF9488_02852 [Coprobacillus sp. 29_1]
 gi|319807254|gb|EFW03866.1| hypothetical protein HMPREF9488_02852 [Coprobacillus sp. 29_1]
          Length = 420

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/420 (14%), Positives = 128/420 (30%), Gaps = 30/420 (7%)

Query: 14  PASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P     M +L I+ +I    W S  +     V ++G I   DN+  I +   G++     
Sbjct: 20  PPMFLTMFILFILFMIIFAIWMSSWMSKSYIVEANGTITTTDNI-YISALSDGVLTSLNS 78

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G+ + +G  L               +  I N +  I      ++ LN   + +  +  
Sbjct: 79  QEGTFVKKGDILFEISSGSEGVQYSALQKQISNTKDKISAINKYINSLNIHQNKMSNSGI 138

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            +E               +   Y ISS+    + K    +SI         K   +++L 
Sbjct: 139 EQE-------------YYEKVRYYISSLEDENQTKENNQKSIKQKEEKKTKKEQEIQSLK 185

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
               K     ++  +K         +    +     EL   I E   + +  +   ++  
Sbjct: 186 DQIYKLKDTEEDKAKKE--------ELNSSLETKQSELESLIEEINQLTQTSSSQAEQTK 237

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           ++  +        L   Q T  +   +L   +      T+ +   G + Y  +       
Sbjct: 238 IQLISEAGNTRTAL---QSTLVELEGQLKAYQSQDALTTVKASQDGYVHYLSTIKEGVTI 294

Query: 313 QQSQPLMKI-VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           Q+ Q + +I         + A +    I  V+      V        +       +  ID
Sbjct: 295 QKGQTVAEISTNKDDQMIVEAYIQATDISKVQLNNDVKVAINGVNIQKYGTLNGKLVSID 354

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                Q+        Y+ ++ + +        + I++    P       +  T    ++ 
Sbjct: 355 SGTLTQETEQGNIVLYKCLVSLDNKQLHSTDGSQIDVIKSMPVVARIVYEKETYLDWLLE 414


>gi|221271441|dbj|BAH14995.1| Hemolysin secretion protein D [Vibrio parahaemolyticus]
          Length = 148

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 56/144 (38%), Gaps = 5/144 (3%)

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P++G +   +  +       ++ LM +VP++ L  + A V  K I  ++ G +  ++  
Sbjct: 2   APVSGKVQQLKVHTEGGVVTTAETLMVVVPNNDLLEVTASVQNKDIGFIQVGQSVIIKVE 61

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPA 411
            +   R       ++ I+    +          + VI+ + D  L+     + L +G   
Sbjct: 62  SFPYTRYGYLTGKVKNINLDAIEDPKLGLV---FNVIVSLEDNYLSTKHKKLPLSSGMSV 118

Query: 412 EVLFTAKNTTLAQEIIHPITDNWP 435
                    ++   ++ P+ ++  
Sbjct: 119 TAEINTGMRSIISYLLSPLEESVT 142


>gi|188577365|ref|YP_001914294.1| membrane-fusion protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188521817|gb|ACD59762.1| membrane-fusion protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 414

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 55/426 (12%), Positives = 140/426 (32%), Gaps = 56/426 (13%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           AS   +   S++  + + T++         + +G+++    +  + +P +G++ +  V  
Sbjct: 32  ASAAGIVAASVVVFLCMGTYAHRS------TVTGQLVPIKGLATVMAPATGVVSRLDVSE 85

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G  L                         +   ++ LD  +             
Sbjct: 86  GQPVKAGQML-----------------------AVVAVPRATLDSGDT------------ 110

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +  L   L K            +  +    +    ++ ++    + ++ + +  R  ++ 
Sbjct: 111 QAALQHQLRKRGEGLKSSEQAQLQQLDAQEQGLRAQLANLRQELMQVDAEIATRRNQIAL 170

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             + L   + L +   VS   + QQE    + T +++    +   M R   ++  +  + 
Sbjct: 171 ANEVLQRWRQLQDDKYVSVLQIKQQESTALEYTSQMQALQRQATEMRRSAAQIEQQLRVL 230

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                      ++ + R  A  + +  +  +      + +P+AG +V  Q        Q 
Sbjct: 231 PGQ-----RGGVQADYRRDAAAVEQEQVQTQVNGALVVTAPVAG-VVATQMAKPGQAIQL 284

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            QPL+ +VP          V  + I  +  G T  +R+  +   +    + ++ +I    
Sbjct: 285 GQPLLSVVPGDGRLEAELLVPSRAIGFIAPGDTVLLRYQAFPYQKFGHQQGLLSRISRSA 344

Query: 375 SQQD-------NNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQE 425
                      N  Q + YY V + +   +         L+ G   +     +   L + 
Sbjct: 345 LSSSELGALIGNAQQGEPYYRVTVALARQSVMAYGKPEMLKPGMLLQADIIGERRKLIEW 404

Query: 426 IIHPIT 431
           +  P+ 
Sbjct: 405 VFEPLL 410


>gi|123968964|ref|YP_001009822.1| hypothetical protein A9601_14321 [Prochlorococcus marinus str.
           AS9601]
 gi|123199074|gb|ABM70715.1| Hypothetical protein A9601_14321 [Prochlorococcus marinus str.
           AS9601]
          Length = 387

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 64/410 (15%), Positives = 144/410 (35%), Gaps = 81/410 (19%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           ++ +   +G I W  L   +  +   G+I+    V EIK P SG+I+K       +I +G
Sbjct: 42  IIVLTSFLG-IGWLALAKTDEIIIVPGKIIPIGKVKEIKMPMSGVIEKI------EIKEG 94

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             +                   K +   I++     D  +N    LE + + +++Q+   
Sbjct: 95  DLVYE-----------------KQVLMRIES-----DTNSNLSTTLENSIKIKKQQI--- 129

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                                SL  ++   + IY    ++      L+  +  +Q     
Sbjct: 130 --------------------ESLNSQILNTQEIYNKNKNI------LKDKIDIYQNITDK 163

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L ++ A+S+ +  +Q+  +     +L                   +  +++A   K 
Sbjct: 164 YQTLLDEGAISELNFLEQKTKLQSLKSDL------------------LQYEMDWATKSKS 205

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               +++ + +      +L   +    +K+I SP+ G I   +  +S   AQ ++ ++KI
Sbjct: 206 QELQMQELKNSLNQLKGELEENDLNLGKKSINSPVNGYIFDLKPVASGYSAQMTETIVKI 265

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           VP         ++    I  VK+G    +    Y        +  I  I     + D + 
Sbjct: 266 VPMGD-LIAYLEIPSSDIGFVKEGMDVEISIDSYPSTDFGIIEGTITSIGTDALEPDPSE 324

Query: 382 QTQEY-YEVILKITDLAFS---DNNIELRNGFPAEVLFTAKNTTLAQEII 427
           Q  ++ Y   +++            ++L+ G   +     +  +  Q + 
Sbjct: 325 QRNQFVYPARIELKSQKLKLRRGKQLDLKVGMSLQGNIKLRKVSYLQLLF 374


>gi|188583741|ref|YP_001927186.1| secretion protein HlyD family protein [Methylobacterium populi
           BJ001]
 gi|179347239|gb|ACB82651.1| secretion protein HlyD family protein [Methylobacterium populi
           BJ001]
          Length = 429

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 51/429 (11%), Positives = 149/429 (34%), Gaps = 54/429 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S++ +  L +  +  +  ++ L      V + G +  +  ++ + SP +G +    V+
Sbjct: 27  PLSVRIVVGLCLAFVALVGLYAWLGSYTRRVHADGLLAPDVGLITVASPLAGRVSASGVK 86

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +G  L T +                            LD ++        A   
Sbjct: 87  EGDRVERGQLLFTID----------------------------LDAVS--------ASGP 110

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            +E+++  LG+   +  +      +      +    ++ ++   R  ++ + +L   L+ 
Sbjct: 111 TQERVIAQLGRQRESVERQRAARAAMAEAEKEGLKEQIANLEAQRAKIDEQLALQEKLVP 170

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +     + +L  +      D   Q  +  ++T +L     + +     +     +   
Sbjct: 171 PLKARADELADLVTRGFARAADFQSQNYLYLQATSQL----AQFRQGGLQVEGKLGDLKA 226

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + + + + ++RDL +  RT A ++ +     + R    + +P  G +   ++ +      
Sbjct: 227 KLSTFDETLARDLAELDRTAA-QLEQQRAESEARRAIEVRAPERGILTSIRAQA-GQTVA 284

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               L+ ++P          V    I  ++ G +  +R+  +   R    + ++ ++   
Sbjct: 285 AGASLLTLLPSDGRMQANLFVDSSAIGFIEPGASVMLRYAAFPFQRFGLHRGVVTEVTRA 344

Query: 374 ISQQDNNLQTQE----------YYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
             + D   +              Y ++++  + + +       L  G   E     +   
Sbjct: 345 PLEGDGQPEAARDAAKSAGSGGVYRIVVRPDEDSVTAYGEPRRLEAGMRVEADIALEKRP 404

Query: 422 LAQEIIHPI 430
           L + ++ P+
Sbjct: 405 LYRWLLDPL 413


>gi|220915002|ref|YP_002490310.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
 gi|219952753|gb|ACL63143.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
          Length = 443

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/426 (14%), Positives = 144/426 (33%), Gaps = 54/426 (12%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
               L +   ++ ++   +          +G ++ E  VV   SP +G+I +  V+ G  
Sbjct: 50  WMFALFASAAVMAIVLLLVFGSYTRKARINGWLVPEQGVVRSFSPQAGVITEVLVQEGMA 109

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G+P+L                                       ++L  A  +  ++
Sbjct: 110 VRKGSPVLVIST-----------------------------------EMLSSAAGATRQE 134

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++  L +   +  +  +  +      +     ++  +   R  LE +  L +  +    +
Sbjct: 135 VVRQLKRRRDSMMQEKSVQVRVFENQINDARKKLDILSAERKHLEVEVGLQKTKIEMADR 194

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
               ++ L +++ V+   L + E+       +L+        + R   E +  A L+   
Sbjct: 195 TAVRLRELRKRDIVTAPRLEEAEKERLDEAAKLQALERSLATLEREQAEAW--ATLQAVP 252

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
             ++I     +++R+ A     L   E  RE   I +P  GTI   Q+      A  S P
Sbjct: 253 LRRQIQE--NESERSVAALEQDLIEAEARRE-IVITAPQDGTITGLQA-EPGGNATTSIP 308

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L  IVP       +     + I  ++ G    +R+  +   +   +  ++  +       
Sbjct: 309 LFGIVPSRSKLQAQLFSPSRGIGFLRAGQRVLLRYQAFPYQKFGFYGGVVTTVSRSALSP 368

Query: 378 DNNLQT-----------QEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQ 424
               QT           +  Y V +++           + L+ G   E     ++  L +
Sbjct: 369 AELNQTLAGLTALFGSNEPIYRVTVELDRQTAVAYGQAVALQPGMQLEADVLIESRRLIE 428

Query: 425 EIIHPI 430
            ++ P+
Sbjct: 429 WVLEPL 434


>gi|318041105|ref|ZP_07973061.1| hypothetical protein SCB01_05326 [Synechococcus sp. CB0101]
          Length = 407

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 56/413 (13%), Positives = 137/413 (33%), Gaps = 55/413 (13%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           R  ++    ++ L  W    P + +V ++G I        ++S   G++ +  V+    +
Sbjct: 37  RTLVVGAASVLALAIW----PWQETVRAAGVIRPAGENTIVQSQLDGVLARVWVKENQVV 92

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  L   +           + S+ N R  ++ E                         
Sbjct: 93  QKGERLAELD-----------RRSLDNERRKLEAE------------------------- 116

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              L +  +         + +  ++   +      +   + DL++ +S L+      + +
Sbjct: 117 ---LTQSLAQQRDSQASRLDAQQQTNATRSLNRAQLNSAQRDLDSAASTLQ----YREVE 169

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L   ++L    AV++  + +++     +  EL     + +  LR                
Sbjct: 170 LKRYRSLLSSGAVAETVIEEKQAQAVLARNEL----AKARQALREQEARGAAELARLGQG 225

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             + +RD  +  +      ++L  +++      I +P AG+++ +         +  + L
Sbjct: 226 SNQATRDSRELAKQVDQTRARLEEVKRALLNSVIKAPKAGSVIVSNLRHPQQVIRSGEVL 285

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ- 377
            +I P      ++  V    +  +K    A +R            KA +  I      Q 
Sbjct: 286 AQIAPSQGELQVKLSVPSSDVGTIKANQPAHLRIAGCPYPEFGVLKARVLNISADTISQG 345

Query: 378 -DNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEII 427
              N      ++V L  +    ++ +    LR+G   +     + TT+   I+
Sbjct: 346 TGRNGTGNPGFQVSLLPSAKPLTNGSRTCLLRHGMDVQADVVTRQTTILGFIL 398


>gi|84623334|ref|YP_450706.1| colicin V secretion protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84367274|dbj|BAE68432.1| colicin V secretion protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 414

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/426 (12%), Positives = 139/426 (32%), Gaps = 56/426 (13%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           AS   +   S++  + + T++         + +G+++    +  + +P +G++ +  V  
Sbjct: 32  ASAAGIVAASVVVFLCMGTYAHRS------TVTGQLVPIKGLATVMAPATGVVSRLDVSE 85

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G  L                         +   ++ LD  +             
Sbjct: 86  GQPVKAGQML-----------------------AVVAVPRATLDSGDT------------ 110

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +  L   L K            +  +    +    ++ ++    + ++ + +  R  ++ 
Sbjct: 111 QAALQHQLRKRGEGVKSSEQAQLQQLDAQEQGLRAQLANLRQELMQVDAEIATRRNQIAL 170

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             + L   + L +   VS   + QQE    + T +++    +   M R   ++  +  + 
Sbjct: 171 ANEVLQRWRQLQDDKYVSVLQIKQQESTALEYTSQMQALQRQATEMRRSAAQIEQQLRVL 230

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                      ++ + R  A  + +  +  +      + +P+AG +V  Q        Q 
Sbjct: 231 PGQ-----RGGVQADYRRDAAAVEQEQVQTQVNGALVVTAPVAG-VVATQMAKPGQAIQL 284

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            QPL+ +VP          V  + I  +  G T  +R+  +   +    +  + +I    
Sbjct: 285 GQPLLSVVPGDGRLEAELLVPSRAIGFIAPGDTVLLRYQAFPYQKFGHQQGRLSRISRSA 344

Query: 375 SQQD-------NNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQE 425
                      N  Q + YY V + +   +         L+ G   +     +   L + 
Sbjct: 345 LSSSELGALIGNVQQGEPYYRVTVGLGRQSVMAYGKPEMLKPGMLLQADIIGERRKLIEW 404

Query: 426 IIHPIT 431
           +  P+ 
Sbjct: 405 VFEPLL 410


>gi|289670682|ref|ZP_06491757.1| membrane-fusion protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 414

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/397 (13%), Positives = 131/397 (32%), Gaps = 52/397 (13%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL-LTFEDIETTDLIDLKKVSI 103
           + +G+++    +  + +P +G++ + +V  G  +  G  L +      T    D +    
Sbjct: 56  TVTGQLVPIKGLATVMAPATGVVSRLEVSEGQPVKAGQILGVVTVPRATLGSGDTQAALQ 115

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             LR   +  KS+                                  +     + +  + 
Sbjct: 116 HQLRQRGEGLKSS---------------------------------EQAQLQQLDAQEQG 142

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L  +L  +R      + ++ + +  R  ++   + L   + L +   VS   + QQE   
Sbjct: 143 LHAQLANLRQ---ELVQVDAEIATRRNQIALANEVLQRWRQLQDDKYVSVLQIKQQESSA 199

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            + T +++    +   M R   ++  +  +            ++ + R  A  + +  + 
Sbjct: 200 LEYTSQMQALQRQATEMRRSAAQIEQQLRVLPGQ-----RGGVQADYRRDAAAVEQEQVQ 254

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            +      + +P+AG +V  Q        Q  QPL+ +VP          V  + I  + 
Sbjct: 255 TQVNGALVVTAPVAG-VVATQMAKPGQAIQLGQPLLSVVPGDGRLEAELLVPSRAIGFIA 313

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD-------NNLQTQEYYEVILKITDL 396
            G T  +R+  +   +    +  + +I               N  Q + YY V + +   
Sbjct: 314 PGDTVLLRYQAFPYQKFGHQQGRLSRISRSALSSSELGALIGNAQQGEPYYRVTVALGRQ 373

Query: 397 AF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           +         L+ G   +     +   L + +  P+ 
Sbjct: 374 SVMAYGKPEMLKPGMLLQADIIGERRKLIEWVFEPLL 410


>gi|288928980|ref|ZP_06422826.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288329964|gb|EFC68549.1| conserved hypothetical protein [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 394

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 62/419 (14%), Positives = 136/419 (32%), Gaps = 74/419 (17%)

Query: 15  ASLKRMTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
              +R+  + ++ ++  +  S+  + ++I+V S+G +     +  I +P +  +++   +
Sbjct: 25  RPKRRIIYIIVLAVVSAVVISLPFVYVDITVQSNGFVRPNGEISVITAPMTETVERVSAK 84

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +G  +L F        I  ++   K     I    + L+ L+        A  +
Sbjct: 85  EGDKLRKGDEILRFRTSSPDGKITYQQERSKEASAQI----ADLELLSKGQCPRAFASAA 140

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R+++   +L                                        ++   L+  L 
Sbjct: 141 RQQEYAKYL----------------------------------------SEQYRLKTDLR 160

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
            ++ +    K LF+K  +S+++ N+          EL                      L
Sbjct: 161 QYETEWRRYKVLFDKGLISESEYNEHYYRYQDKLNELH---------------------L 199

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +  N       +L   +    +  S L      R    + SPI GT+         +  Q
Sbjct: 200 QQTNQKSTWKTELTNLKMQLKETTSNLIETRSNRNVYVVRSPINGTLEQFSGIYPGSNLQ 259

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               +  + P     YI A V P+ I  +++     V+   +        +  ++ I   
Sbjct: 260 VGATIAVVSP-DTSLYIEAYVAPRDIAFIRENMRVKVQIESFNYNEWGTLQGYVQHISSD 318

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVLFTAKNTTLAQEIIH 428
                 N   + YY+V  K+T       N +    ++ G    V F     +L   +  
Sbjct: 319 YI---RNNNGESYYKVKCKLTKNYLELRNSKRKGYVKKGMAGIVHFVVTRRSLFNLLYK 374


>gi|307132108|ref|YP_003884124.1| HlyD family secretion protein [Dickeya dadantii 3937]
 gi|306529637|gb|ADM99567.1| HlyD family secretion protein [Dickeya dadantii 3937]
          Length = 215

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 56/148 (37%), Gaps = 5/148 (3%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           ++SP+ G I Y    +++      + L++I P      I A+V  + + +++ G  A + 
Sbjct: 67  VVSPVRGIIRYILVDAATGQISPGRTLVEITPLDDKLLIEARVRLQDMAYLRPGQEAMMT 126

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGF 409
           F  Y D      K  I++I   +           +Y V L+         D  + +  G 
Sbjct: 127 FTAYDDATLGGLKGYIDQISQDMVTD---QAGNSFYLVRLRTEKNYLGNIDKPLLILPGM 183

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWPKI 437
            A V       TL   ++ PI     + 
Sbjct: 184 VANVNIITGRKTLLSYLLKPIRQARAEA 211



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 8/49 (16%), Positives = 24/49 (48%)

Query: 46 SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +G+ +++     +++  +G +    +  G  +  G PL+  E I+ ++
Sbjct: 3  VTGKTISQSQRYRVQAQETGELSDMYIREGQIVNIGEPLMRLEHIQPSN 51


>gi|121633974|ref|YP_974219.1| putative protein export protein [Neisseria meningitidis FAM18]
 gi|239997884|ref|ZP_04717808.1| putative protein export protein [Neisseria gonorrhoeae 35/02]
 gi|240124631|ref|ZP_04737517.1| putative protein export protein [Neisseria gonorrhoeae SK-92-679]
 gi|268593733|ref|ZP_06127900.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268683203|ref|ZP_06150065.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|120865680|emb|CAM09405.1| putative protein export protein [Neisseria meningitidis FAM18]
 gi|261391636|emb|CAX49080.1| putative bacteriocin/pheromone secretion membrane fusion protein
           [Neisseria meningitidis 8013]
 gi|268547122|gb|EEZ42540.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268623487|gb|EEZ55887.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|325133164|gb|EGC55835.1| auxiliary transport protein, membrane fusion protein family
           [Neisseria meningitidis M6190]
 gi|325203216|gb|ADY98669.1| MceH [Neisseria meningitidis M01-240355]
          Length = 421

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 72/432 (16%), Positives = 140/432 (32%), Gaps = 55/432 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S   +T  + +  + +I + I        +  G++L    VV + S   G I    
Sbjct: 24  TRPFSFLFLTFCAFLIALCIIIFLIFGSYTNKTTVEGQLLPTMGVVRVYSSDIGTITHKF 83

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE+G+ +  G PL         +          N++  +  E +    L           
Sbjct: 84  VEDGNFVKAGEPLFKLSTSRFGEK--------GNVQAKLAAEANLKKTLA---------- 125

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                Q L+ L + H    K  +  I  +   L+              +++ + +     
Sbjct: 126 ----LQELERLKRIHQNEQKNVHNNIHRLNNQLE--------------NIKQQITGQNRQ 167

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   +K L   K L  + AVSQ D    E  + +    L     EQ N +R +    DE 
Sbjct: 168 IRLAEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKREQNNAIREL----DEQ 223

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +  ++  +    +L Q  R   +   ++      + ++TI +  +G I           
Sbjct: 224 KITLSSLPERHKTELSQLNRAITEMNQEILDF-DLKSEQTIRASKSGYISTINVD-IGQQ 281

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            + S+ L+ IVP          +  K +  +K      +R+  Y   +       I  + 
Sbjct: 282 VEPSKLLLSIVPEQTELVANLYIPSKAVGFIKPKDKVVLRYQAYPYQKFGHATGEIISVA 341

Query: 372 PIISQ-----------QDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                            +  L  +  Y V +K+          N  L+ G   E     +
Sbjct: 342 RTALGKQELSGLGIIFTNPTLLNEPAYLVKVKLEKQTIKAYGENKPLQIGMILEADILHE 401

Query: 419 NTTLAQEIIHPI 430
              L + ++ P+
Sbjct: 402 RKKLYEWVLDPL 413


>gi|116071720|ref|ZP_01468988.1| hypothetical protein BL107_06209 [Synechococcus sp. BL107]
 gi|116065343|gb|EAU71101.1| hypothetical protein BL107_06209 [Synechococcus sp. BL107]
          Length = 344

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 56/402 (13%), Positives = 136/402 (33%), Gaps = 84/402 (20%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           I   I+  V+  G++ +    +E+K+P  G + +    +G  + +G              
Sbjct: 13  IFFRIDEVVTVQGQLKSIGGTIEVKTPAGGKVAEVLFNDGDNVQKG-------------- 58

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                     L    DT ++                    +Q  + L +  +   K    
Sbjct: 59  ---------QLLLRFDTRQA--------------------KQEQEMLVRVIAIEKKELKS 89

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +S++     M L+R+               +L+  + +    L  M+ L E+    +  
Sbjct: 90  QVSTINSQEAMLLSRVE--------------VLKRRIKTKSMILKQMETLVEEGGFQRLQ 135

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
             +Q+  +++   +L E + +Q  +   + ++   +                   ++  +
Sbjct: 136 YLEQKDELFQLENQLGELLEQQNQLNNQVEQIQLSST------------------KSINE 177

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             ++L   E   + + + +P++G +   Q+ +        + ++ IVP     Y    V 
Sbjct: 178 METRLKAAELQLQYQNVNAPVSGIVFDPQASADG-VMSAGERIVSIVPQKG-LYAEVYVP 235

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE--VILKI 393
              I ++K G  A VR   +   R     A + +I     +       Q +Y   V L++
Sbjct: 236 NNDIGYIKVGQEAKVRVDAFPFTRYGDIAATVSQIAADALE---PKTEQNFYRFPVKLRL 292

Query: 394 TDLAFSDN--NIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           ++     N   + L++G         ++  +   +   + D 
Sbjct: 293 SNSYLISNSMKVPLKSGMSITTNLKLRDKRVISLLSDMLVDQ 334


>gi|308388316|gb|ADO30636.1| putative protein export protein [Neisseria meningitidis alpha710]
 gi|325131134|gb|EGC53855.1| MceH [Neisseria meningitidis OX99.30304]
 gi|325137158|gb|EGC59753.1| putative export protein [Neisseria meningitidis M0579]
 gi|325201276|gb|ADY96730.1| MceH [Neisseria meningitidis M01-240149]
 gi|325207136|gb|ADZ02588.1| auxiliary transport protein, membrane fusion protein, MFP family
           [Neisseria meningitidis NZ-05/33]
          Length = 421

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 72/432 (16%), Positives = 140/432 (32%), Gaps = 55/432 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S   +T  + +  + +I + I        +  G++L    VV + S   G I    
Sbjct: 24  TRPFSFLFLTFCAFLIALCIIIFLIFGSYTNKTTVEGQLLPTMGVVRVYSSDIGTITHKF 83

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE+G+ +  G PL         +          N++  +  E +    L           
Sbjct: 84  VEDGNFVKAGEPLFKLSTSRFGEK--------GNVQAKLAAEANLKKTLA---------- 125

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                Q L+ L + H    K  +  I  +   L+              +++ + +     
Sbjct: 126 ----LQELERLKRIHQNEQKNVHNNIHRLNNQLE--------------NIKQQITGQNRQ 167

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   +K L   K L  + AVSQ D    E  + +    L     EQ N +R +    DE 
Sbjct: 168 IRLAEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKLEQNNAIREL----DEQ 223

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +  ++  +    +L Q  R   +   ++      + ++TI +  +G I           
Sbjct: 224 KITLSSLPERHKTELSQLNRAITEMNQEILDF-DLKSEQTIRASKSGYISTINVD-IGQQ 281

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            + S+ L+ IVP          +  K +  +K      +R+  Y   +       I  + 
Sbjct: 282 VEPSKLLLSIVPEQTELVANLYIPSKAVGFIKPKDKVVLRYQAYPYQKFGHATGEIISVA 341

Query: 372 PIISQ-----------QDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                            +  L  +  Y V +K+          N  L+ G   E     +
Sbjct: 342 RTALGKQELSGLGIIFTNPTLLNEPAYLVKVKLEKQTIKAYGENKPLQIGMILEADILHE 401

Query: 419 NTTLAQEIIHPI 430
              L + ++ P+
Sbjct: 402 RKKLYEWVLDPL 413


>gi|298370176|ref|ZP_06981492.1| auxiliary transport protein, membrane fusion protein [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298281636|gb|EFI23125.1| auxiliary transport protein, membrane fusion protein [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 431

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 63/438 (14%), Positives = 136/438 (31%), Gaps = 61/438 (13%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P S   +T  +  G   LI ++         +  G++L    +V + +P +G++   +
Sbjct: 27  SRPFSFVFLTCCAAAGAFTLIIFAFFGSYTRKTTVEGQLLPVSGLVRVYAPDTGVVTSKK 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V +G  + QG  LLT      +   D++   +K      D                    
Sbjct: 87  VADGDYVQQGDELLTISMPRYSGGGDVRAKLVKEAEMKKDML------------------ 128

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                Q ++   K      +     ++ +   L               D+ ++       
Sbjct: 129 ----LQEIERQKKVQQGEERTLTDTVAKLENQL--------------ADIRSQIQGQEKR 170

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   ++ +   + L ++  +S+  +   E        +L     EQ  +LR +N      
Sbjct: 171 VQLAKQIIEKYRPLLKQGFISEQQMIGYENEHLDQVSQLNALKREQAGVLRELNTQ---- 226

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                +   +   +L Q  RT ++   +   L+  +EQ  + +  +G +  +        
Sbjct: 227 KQTLESLPAKQETELSQLNRTVSEIKQEELNLDLQQEQT-VHASKSGYVSTSNV-EVGQQ 284

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI- 370
              SQ L+ IVP +        V  +    +       +R+  Y   +    +  I  I 
Sbjct: 285 VSPSQLLLSIVPGNTELVANLYVPSRAAGFINPNDKVVLRYQAYPYQKFGHAQGKIISIA 344

Query: 371 ---------------DPIISQQ-DNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAE 412
                                Q       +  Y V +K+          N  L+ G   E
Sbjct: 345 KTALGKQELASLGGASADSENQMVQAQANEPVYLVKVKLEKQTIKVYGKNKPLQIGMVVE 404

Query: 413 VLFTAKNTTLAQEIIHPI 430
                +   L + ++ P+
Sbjct: 405 ADILHERKKLYEWVLDPL 422


>gi|17233026|ref|NP_490116.1| hypothetical protein all7010 [Nostoc sp. PCC 7120]
 gi|17135548|dbj|BAB78094.1| all7010 [Nostoc sp. PCC 7120]
          Length = 484

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 57/460 (12%), Positives = 142/460 (30%), Gaps = 58/460 (12%)

Query: 22  LLSIIGIIGLITWSILLPIEIS------VSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            +++ G++ L  ++    +         V     +  +  +  +++   G IK   V+  
Sbjct: 22  WVTMGGVVLLSIFATTFFLASILKYRVTVKVPATVRPDGELRLVQAATEGKIKSLAVQVN 81

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN----NKYDVLEKAF 131
             + QG  +   ED          + +I+     +    + +  LN     + D + +  
Sbjct: 82  QTVNQGDIIALVEDDRLQTQKSQLQTNIQQATLQLTQIDAQITALNKQIIAERDRINRVI 141

Query: 132 ESREEQLLDFLGKYHSTC---SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            + E +L      +       S  F    +++ ++ K        +     + ++  + L
Sbjct: 142 SAAEAELNRNQRDFQDREINSSVQFREAQANLQQAEKELQKTQSQLKSAIANFKSSETSL 201

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN--------------- 233
           +A  +   +     K L E  ++SQ+   + +    +    L                  
Sbjct: 202 KAAQARRDRY----KPLLETGSISQDQFQEVQLAFEQQQQILESQTANVEQSQQAIQQQK 257

Query: 234 --IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE--------------- 276
             I   K  L       + ++       ++I+ +   ++ + +                 
Sbjct: 258 YAIAAAKARLEGALANLNPSDANVVIAQEKIATERAVSEVSLSRLNQEREQLLQQKLELQ 317

Query: 277 ------MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                   +L  + +      I +  +G I      + +   +    + +I P      I
Sbjct: 318 KQLSRDRQELNQIMREIANTAIRASASGIIQELNLRNPAQIIRSGDIVAQISPRKSPLII 377

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           +A V    I+ V+      +R    +       K  +  I P +     N      YEV 
Sbjct: 378 KALVPASDIRKVETNQEVQLRISSCSYTEYGTLKGSVSAISPDVI-NSGNQNNPAMYEVT 436

Query: 391 LKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           ++   L     D    +++G  A     +  T + Q ++ 
Sbjct: 437 IQPKKLELTAGDRQCAIKSGMEARADILSSETIILQFLLK 476


>gi|332533723|ref|ZP_08409582.1| toxin secretion, membrane fusion protein [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332036887|gb|EGI73348.1| toxin secretion, membrane fusion protein [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 414

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 63/421 (14%), Positives = 144/421 (34%), Gaps = 47/421 (11%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S   +  L +  +I  +T+ IL         SG +     + ++    +G++++  VE G
Sbjct: 28  SFTWILGLILGIVIIGLTYLILGEYHRKEVVSGYLRPTTGLSKVYPLTTGVVEEIFVEEG 87

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +++G  L                         ++   S+ + +N+             
Sbjct: 88  EHVIKGQLLARI---------------------RMERLLSSGNDIND------------- 113

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             ++  L K     ++           S++   +++ S        + + +LL   +   
Sbjct: 114 -VIVSELTKQKQFLNENLQNQKLLAEVSVEKLESQIASTTFQVEQAQKQLTLLEKRVVLS 172

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +K +   ++L EK   S  DL      V  +   +++   + +  L    EL  +   E 
Sbjct: 173 KKRVADTESLIEKQFASNADLE----TVKDNYFAIQQQAEDLEARLLTQKELLSQYRFEL 228

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                       Q +   A+   +++  E       + S  +G I           AQ +
Sbjct: 229 IQMPMNQQEVESQLRSQLANINQQISQAESQGSY-DVRSQRSGRISNLLV-KPGMMAQSN 286

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            PLM ++P          V  +    V+KG    +R+  +   R   +  +I+ +   I 
Sbjct: 287 YPLMAVLPEETKLEAVLFVPTRAYGFVQKGQGTRIRYQAFPYQRFGIYDGVIKSVSKSIL 346

Query: 376 QQDNNLQT----QEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
             +         +  Y+V++++T+        ++ L+ G   E      + +L + +  P
Sbjct: 347 LPNETALPVSLQEPMYQVVVELTNQNAQAYGASVPLQAGMLLEADIMVDSRSLFEWLFEP 406

Query: 430 I 430
           I
Sbjct: 407 I 407


>gi|312881780|ref|ZP_07741554.1| toxin secretion, membrane fusion protein [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309370531|gb|EFP98009.1| toxin secretion, membrane fusion protein [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 412

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 66/421 (15%), Positives = 144/421 (34%), Gaps = 45/421 (10%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S+  +  +  I +  L+ +          +  G IL +  V+   S   GI+K   V 
Sbjct: 26  PLSIYLIVAILFISVSLLVLFLNYAEYSRKETVQGYILPDKGVIRSFSQREGIVKTVHVS 85

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +G PL+T               S   L   +D  ++ +     +Y  + K  E 
Sbjct: 86  EGQEVEKGHPLITI-------------SSKSKLENGLDLNQTVVREYEKQYQYINKEIEY 132

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +     + L     +  ++    I     ++  +   ++  Y  +L+ E +   L     
Sbjct: 133 Q-----NSLYAQQISKQRLLAADIERQLAAVDSQKLLIKEKYQLQLEREAQHQKLHREGH 187

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               D    K        +  ++  QE  V  + LELR+  +  ++ L  + + +    L
Sbjct: 188 LSALDFQSQKE-------ALIEIKAQEERVIANELELRKVRNTLQSDLTILPKQHQLNVL 240

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +       I + L Q Q                     + +   G +      +     +
Sbjct: 241 DLEQQKSLIRQQLSQAQGNAI---------------HVLTANEKGKVTGINVVT-GETVR 284

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            +  ++ ++P +        +  +    VKKG    +R   +   R       +  ID +
Sbjct: 285 DNDLMLSLIPENAELVAELFLPTRSAGFVKKGDLVKLRLEAFPYQRFGYLSGAVSHIDTV 344

Query: 374 ISQQDNNLQ--TQEYYEVILKITDL--AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           + QQ  +    ++  Y + + +      F  + I L+NG   E     ++ ++   I+ P
Sbjct: 345 LLQQGESPLSISEPVYRIRVSLDKEYVDFKGSTISLKNGMLLEADILLESRSILGWILEP 404

Query: 430 I 430
           +
Sbjct: 405 V 405


>gi|318606411|emb|CBY27909.1| hlyd family secretion protein [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|330860446|emb|CBX70753.1| hypothetical protein YEW_GB25090 [Yersinia enterocolitica W22703]
          Length = 121

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 1/112 (0%)

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M+IVP  +   I  ++ P+ I +++ G  AT +   Y          ++E + P   Q +
Sbjct: 1   MEIVPIEEQLLIETRINPRDIAYIRPGLPATAKITAYDSSIYGNPTGVVETVSPDTLQNE 60

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              + Q YY + ++      +     +  G  A V       T+   +I P+
Sbjct: 61  V-KRDQLYYRIYVRTNLTNKAGKLFPILPGMVASVEIKTGQKTVLDYLIKPL 111


>gi|325135210|gb|EGC57835.1| MceH [Neisseria meningitidis M13399]
          Length = 421

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 72/432 (16%), Positives = 140/432 (32%), Gaps = 55/432 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S   +T  + +  + +I + I        +  G++L    VV + S   G I    
Sbjct: 24  TRPFSFLFLTFCAFLIALCIIIFLIFGSYTNKTTVEGQLLPIMGVVRVYSSDIGTITHKF 83

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE+G+ +  G PL         +          N++  +  E +    L           
Sbjct: 84  VEDGNFVKAGEPLFKLSTSRFGEK--------GNVQAKLAAEANLKKTLA---------- 125

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                Q L+ L + H    K  +  I  +   L+              +++ + +     
Sbjct: 126 ----LQELERLKRIHQNEQKNVHNNIHRLNNQLE--------------NIKQQITGQNRQ 167

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   +K L   K L  + AVSQ D    E  + +    L     EQ N +R +    DE 
Sbjct: 168 IRLAEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKREQNNAIREL----DEQ 223

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +  ++  +    +L Q  R   +   ++      + ++TI +  +G I           
Sbjct: 224 KITLSSLPERHKTELSQLNRAITEMNQEILDF-DLKSEQTIRASKSGYISTINVD-IGQQ 281

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            + S+ L+ IVP          +  K +  +K      +R+  Y   +       I  + 
Sbjct: 282 VEPSKLLLSIVPEQTELVANLYIPSKAVGFIKPKDKVVLRYQAYPYQKFGHATGEIISVA 341

Query: 372 PIISQ-----------QDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                            +  L  +  Y V +K+          N  L+ G   E     +
Sbjct: 342 RTALGKQELSGLGIIFTNPTLLNEPAYLVKVKLEKQTIKAYGENKPLQIGMILEADILHE 401

Query: 419 NTTLAQEIIHPI 430
              L + ++ P+
Sbjct: 402 RKKLYEWVLDPL 413


>gi|37677338|ref|NP_937734.1| membrane-fusion protein [Vibrio vulnificus YJ016]
 gi|37201884|dbj|BAC97704.1| membrane-fusion protein [Vibrio vulnificus YJ016]
          Length = 426

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 66/438 (15%), Positives = 149/438 (34%), Gaps = 55/438 (12%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             ++ ++    PAS+  + L+  + ++ +  +  +       +  G ++ E  V++  + 
Sbjct: 26  QRLYGSISLAQPASIYGVALVLCMIVVMIAVFLFVSEYTRKETVRGYLVPEKGVLKTYAS 85

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
            +G I++  V  G  +L+G PL T    + T+    L +V ++  +  + +  + L   +
Sbjct: 86  RAGTIEQLHVSEGELVLKGQPLATLVLRQGTSSGAQLSQVVVEQYKLQLLSLVAELKIQD 145

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                                                   + L+     ++ +    +  
Sbjct: 146 ------------------------------------EIEQKELQRVKQAIKDVDAKLVAY 169

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                +    LS  +  L+    LF    +S ++   +++       EL        N+ 
Sbjct: 170 NELMQIAEDKLSLQENKLSQQDRLFNDGYLSLSEYQDKQQQSLTLKQELHNARTSVINLR 229

Query: 242 RHINELYDEANL---EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
              N L  +  L   E+A     I R     QR  ++         +T  +  I +P +G
Sbjct: 230 AERNSLLAQLALLPSEYALKRSNIERQQADLQRVISE--------TETNYRYVIEAPESG 281

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +          +   S+PL+ ++P + +      +  +    ++ G+TA +RF  +   
Sbjct: 282 VVAAIPVV-EGEFIASSRPLLTLLPENAVLVAELLMPTRSSGFMEVGHTAKLRFDAFPYQ 340

Query: 359 REKKFKAIIEKID----PIISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAE 412
           R     + + +ID               T+  Y V  K++            L+ G   E
Sbjct: 341 RFGSITSEVVRIDKSLVVDGEADLPFQLTEPVYRVRTKLSRQQVVAYGEAFPLKAGMLFE 400

Query: 413 VLFTAKNTTLAQEIIHPI 430
                   +L + I+ PI
Sbjct: 401 ADIILDKRSLIEWILDPI 418


>gi|148241586|ref|YP_001226743.1| hypothetical protein SynRCC307_0487 [Synechococcus sp. RCC307]
 gi|147849896|emb|CAK27390.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
          Length = 386

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 68/439 (15%), Positives = 139/439 (31%), Gaps = 84/439 (19%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKS 61
               + ++     +  R    +I+G IG    ++++  I+  V + GE+        IK+
Sbjct: 18  PLAHQEVRYRAAPTWTRALQWAIVGCIGFGFLYAVVARIDEVVIARGELKGMGAERPIKA 77

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           P SG      V +G  + +G                                      L 
Sbjct: 78  PVSG------VVSGIPVTEG-------------------------------------ELV 94

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               VL +       + L  LG+     S+     I +                     L
Sbjct: 95  TPGQVLIQFDPEVNTERLRSLGRQKELESRRLKEEIQAFEARED--------------SL 140

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K + L+  L      +  M  L  + A+++    QQ+  +     EL+  I + +  L
Sbjct: 141 QAKLNSLQMTLKVEASIVDRMAGLVSQGAIAEVQYLQQKNRLQ----ELQSEIAQTEATL 196

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R +     ++  +               QR  AD   +L    K++E +++ +P+ G + 
Sbjct: 197 REVQAESIKSKQQI--------------QRELADLERQLVETNKSQEYESLRAPVKGYVF 242

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                S    A   + L+KIVP   +      VT   +  ++    A VR   Y   +  
Sbjct: 243 DLIVASPGYAASSGETLLKIVPEG-MLEASVFVTNADVGFLRPKMPAQVRVDAYPFTQYG 301

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKN 419
                ++++     +  +    +  +   + +             +  G    V F  ++
Sbjct: 302 DIPGELKRVGKQSLE-PDQQNPEPRFPAQVVLKRQYLEKRGKLFPVSAGQSVSVNFIVRD 360

Query: 420 TTLAQEIIHPITDNWPKIF 438
             +   +    TD+  K F
Sbjct: 361 KPVISLL----TDSVEKAF 375


>gi|198283932|ref|YP_002220253.1| secretion protein HlyD family protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198248453|gb|ACH84046.1| secretion protein HlyD family protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 457

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 66/434 (15%), Positives = 135/434 (31%), Gaps = 55/434 (12%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            ++   P       ++++   + +I   I       ++ +G ++    ++ I +P SG +
Sbjct: 37  PIRLGSPVHHHVYAVIALFVTLAIILLLIFGHYTRHLAVTGILVPSQGLLTISAPISGTV 96

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           +K  V +G ++  G PLL          + L    I+     I+ EK  L          
Sbjct: 97  EKVLVHSGEKVRAGAPLLEIASNPDNPSVGLVATIIEQ---SINAEKRVL---------- 143

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                                 S   +   S           +++ +     +   + ++
Sbjct: 144 ----------------------SGSLSAARSVSRMQQTALRDKLQLLQAQLAETSAEIAI 181

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHI 244
               ++S +K L    ++  +  VS  +L QQ   VY +  +   L     E    +   
Sbjct: 182 QHQDINSTEKVLREFMSVRGRGLVSDPELQQQHLTVYSAETQLEGLERQRTELAQNISSA 241

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                E  L   N    I   LE  ++  A       +L        I +P  G +    
Sbjct: 242 THQLGELPLTSLNQENTIRSKLETLRQELAKTAGSNVLL--------IRAPANGIVSAMT 293

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                      QP++ ++P       +  V+ + I  +  G T  + +  +       F 
Sbjct: 294 VN-PGQAIAAGQPVLSVMPAGDPLRAQLLVSSQAIGFLTVGGTVALHYAAFPYRDFGTFH 352

Query: 365 AIIEKID------PIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFT 416
             +  I         I+       T   Y +++++  T +        LR G       T
Sbjct: 353 GTVRSISGSALTPAEIAALTGAHSTVPLYRIMVQLHRTTVEVHGRQKSLRAGMQLHAEIT 412

Query: 417 AKNTTLAQEIIHPI 430
                L Q +  P+
Sbjct: 413 LNRLRLIQWVFEPL 426


>gi|229142529|ref|ZP_04271016.1| hypothetical protein bcere0013_55880 [Bacillus cereus BDRD-ST26]
 gi|228640924|gb|EEK97268.1| hypothetical protein bcere0013_55880 [Bacillus cereus BDRD-ST26]
          Length = 421

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/428 (13%), Positives = 147/428 (34%), Gaps = 22/428 (5%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R  P  +  +     + +IG I W+ +  ++I    +  I  + +V   ++   G++ 
Sbjct: 1   MERKPPRFIAGLLCFLFLSLIGFIIWAYVGKLDIVSKGTAMIQGKSDVSVSRTQIPGVVD 60

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V++G+ + +G  LL  ++ E  D    K+  +  +  H++ +K  L+ L       +
Sbjct: 61  TISVQSGNAVKKGDTLLQLKNQELMD----KQNQMDQIVKHLEGQKEMLEQLKKSIQSHK 116

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            +F    ++ +    K +    +       +    +           + +  L  +   +
Sbjct: 117 SSFSDEVDKKIREEYKAYEQGYQSLQNEKENEINLIVNSKLSNEQDEILQ-GLIAEKENI 175

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI---VYKSTLELRENIHEQKNMLRHIN 245
           +  + S  K       L E+  V  + +   E     + K   + +E +  ++  +    
Sbjct: 176 QREIKSINKQKDKENILDEQKQVLDDRIQSLESQQNNIEKRIGQRKETLDSERKKVDTTK 235

Query: 246 ELYDEANLEFANYLKE-----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           E   +      N  KE     +++ ++  ++    +   L+ L    E   I +   G +
Sbjct: 236 EGKQKQKEHALNQYKESTIVSVNQRIQSLEQEIFIKKQDLSGLHNQNETMIIKAYQDGVV 295

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            +       +     Q ++ I+P      ++  +  ++I+ +KKG         +   + 
Sbjct: 296 QFPSILQPGDLIDPGQEVVSIIPKEDGKKVKILLPAEEIRGIKKGDKVQ---YSFKLNKT 352

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            K    +  I        +       YE+   I          EL  G    V       
Sbjct: 353 DKQMGKVTYISAH--PIFDKDSKAYVYELEATIDKQELY----ELHTGMVGRVSIVTGEE 406

Query: 421 TLAQEIIH 428
            + + I+ 
Sbjct: 407 PIWKFILR 414


>gi|288926904|ref|ZP_06420804.1| hypothetical protein HMPREF0649_02315 [Prevotella buccae D17]
 gi|288336343|gb|EFC74724.1| hypothetical protein HMPREF0649_02315 [Prevotella buccae D17]
          Length = 402

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 67/428 (15%), Positives = 138/428 (32%), Gaps = 73/428 (17%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +H A  K +    +  I  LI     + ++I+V SSG +     +  I +P + I++   
Sbjct: 22  HHRAKNKIIYWTVLFFITALIVALPFIYVDITVQSSGVVRPSGEISRITAPMTEIVETVC 81

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            + G  + QG  +L F     T   D +    ++       + + LD L+        A 
Sbjct: 82  AKEGDMLRQGDEILRF----RTSSSDGRIKYQQDREADTQAQITDLDLLSRGLCPHVFAS 137

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +R+++   +                                        ++++  L+  
Sbjct: 138 AARQQEYAKY----------------------------------------QSETHRLQTE 157

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L   + +    K LF K  +S+++ N+                           +  +E 
Sbjct: 158 LRQLETEWKRHKVLFGKGLISESEYNE---------------------HYYRYQDKLNEL 196

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           NL  AN +     +L   +   ++  S LT     +    + SPI GT+         + 
Sbjct: 197 NLLNANRMSAWKTELANLRMQLSETASNLTETRSNKNLYIVRSPINGTLEQFAGIYPGSN 256

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q    +  + P     +I A V P+ I  + +G    V+   +        +  ++ + 
Sbjct: 257 LQIGTTIAMVSP-DTTLHIEAYVAPRDIAFITEGMRVKVQIESFNYNEWGTLEGKVQSVS 315

Query: 372 PIISQQDNNLQTQEYYEVILKITD--LAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEII 427
                  N      YY+V   +    L     N +  ++ G    + F     +L   + 
Sbjct: 316 SDYVSDGN---GNTYYKVKCMLLKKYLELRKQNRKGFVKKGMTGVIHFVVTRRSLFDLLY 372

Query: 428 HPITDNWP 435
             + D   
Sbjct: 373 KSLDDWMN 380


>gi|218665040|ref|YP_002426565.1| toxin secretion protein, HlyD family [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218517253|gb|ACK77839.1| toxin secretion protein, HlyD family [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 445

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/434 (15%), Positives = 135/434 (31%), Gaps = 55/434 (12%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            ++   P       ++++   + +I   I       ++ +G ++    ++ I +P SG +
Sbjct: 25  PIRLGSPVHHHVYAVIALFVTLAIILLLIFGHYTRHLAVTGILVPSQGLLTISAPISGTV 84

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           +K  V +G ++  G PLL          + L    I+     I+ EK  L          
Sbjct: 85  EKVLVHSGEKVRAGAPLLEIASNPDNPSVGLVATIIEQ---SINAEKRVL---------- 131

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                                 S   +   S           +++ +     +   + ++
Sbjct: 132 ----------------------SGSLSAARSVSRMQQTALRDKLQLLQAQLAETSAEIAI 169

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHI 244
               ++S +K L    ++  +  VS  +L QQ   VY +  +   L     E    +   
Sbjct: 170 QHQDINSTEKVLREFMSVRGRGLVSDPELQQQHLTVYSAETQLEGLERQRTELAQNISSA 229

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                E  L   N    I   LE  ++  A       +L        I +P  G +    
Sbjct: 230 THQLGELPLTSLNQENTIRSKLETLRQELAKTAGSNVLL--------IRAPANGIVSAMT 281

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                      QP++ ++P       +  V+ + I  +  G T  + +  +       F 
Sbjct: 282 VN-PGQAIAAGQPVLSVMPAGDPLRAQLLVSSQAIGFLTVGGTVALHYAAFPYRDFGTFH 340

Query: 365 AIIEKID------PIISQQDNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFT 416
             +  I         I+       T   Y +++++  T +        LR G       T
Sbjct: 341 GTVRSISGSALTPAEIAALTGAHSTVPLYRIMVQLHRTTVEVHGRQKSLRAGMQLHAEIT 400

Query: 417 AKNTTLAQEIIHPI 430
                L Q +  P+
Sbjct: 401 LNRLRLIQWVFEPL 414


>gi|71280972|ref|YP_271157.1| putative toxin secretion protein [Colwellia psychrerythraea 34H]
 gi|71146712|gb|AAZ27185.1| putative toxin secretion protein [Colwellia psychrerythraea 34H]
          Length = 418

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/438 (14%), Positives = 147/438 (33%), Gaps = 49/438 (11%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
              +   +    P S+K   L+ +   I +IT+          +  G ++    V++  +
Sbjct: 13  SERLTGAITLAQPLSIKLTVLILVSIAIAIITFLFSAEYSRKETVRGFLMPNKGVIKSFA 72

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G I+K  V+ G ++L+G  L T    +           +                  
Sbjct: 73  NQGGTIEKLWVKEGDKVLKGQSLATIIVQQNNSNGIDLSTQLAEQ--------------- 117

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                      ++   L+D + ++ +   +            L     +  ++   ++ L
Sbjct: 118 ---------LNAQANLLIDEISQHQTLKKQ-----------ELSNLYAQNMALDNEKIAL 157

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E++  L    L+   +       L +   +S  + ++Q+    ++ LE ++       +L
Sbjct: 158 EDQLELADEKLTLLTEQQLDFNQLNKSGYLSNLENDRQQ----QALLEAKQEKQNIARLL 213

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                  ++      N  ++ +  +   +R  AD   +L  +    +   I +   G + 
Sbjct: 214 LQHQNQLNQIAFNIKNIPQQYTLRINNLKRQQADLQRQLVQVASNYKYT-ITASNNGVVT 272

Query: 302 YNQSF---SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
             Q     + S    QS+PL+ I+P          +  +    ++ G    +RF  +   
Sbjct: 273 GVQVVEGETLSQSKAQSKPLLHILPEGSELIAELLLPTRSAGFIQVGNNTRLRFDAFPYQ 332

Query: 359 REKKFKAIIEKIDPIISQ----QDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAE 412
           R     + I +ID  +      Q      +  Y +  K+          + +L++G   E
Sbjct: 333 RFGFINSEIIRIDQTLITPSEIQLPIALQEPVYRLRAKLNQQQMKAFGKSFDLKSGMLFE 392

Query: 413 VLFTAKNTTLAQEIIHPI 430
                +  +L + ++ PI
Sbjct: 393 ADIMLEKRSLIEWLLEPI 410


>gi|320330195|gb|EFW86180.1| secretion protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330880468|gb|EGH14617.1| secretion protein [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 378

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/408 (14%), Positives = 134/408 (32%), Gaps = 53/408 (12%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
                    ++SG +L E  ++ I SP +G+I +  +  G  +  G  L+          
Sbjct: 6   TFATYTKRTAASGVLLPETGLIRIYSPQAGVITRLDIVEGQHVTDGAVLMALSS------ 59

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                                        D         +  +   + +   + ++  + 
Sbjct: 60  -----------------------------DTQSGEAGGAQRAISLSIKRRQESLAQEIDE 90

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++   + L+ K  ++ ++   +  +  +  L R  L+  +       NL  ++ VS++ 
Sbjct: 91  TLALHLQELEGKKRQVAALETEQQKILAQIDLTRQRLALTKGLAERYANLQRQDYVSRDQ 150

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L +++     + L++R    E    L  +         E        S+ L   +R  A+
Sbjct: 151 LQEKQ----DAVLDMRLRGEELNRSLLTVRAESTRLRAELVELPFNQSKQLADLRRRLAE 206

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +L   E  RE   I +P  G +      S+ +    ++PL+ IVP     +    + 
Sbjct: 207 NQDRLIESETKRE-IFITAPTLGEVTAIAV-SNGSRVDSTRPLLSIVPADAKLHAELYLP 264

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ----------TQE 385
            + +  V+ G T  +R+  Y   R       +  I       D  +              
Sbjct: 265 SRSVGFVRTGDTVMLRYQAYPYQRFGLQPGTVSSISRTALPADEVMTLGNVSEPMREQGP 324

Query: 386 YYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           +Y V + +         +   LR+G   +     +   L + ++ P+ 
Sbjct: 325 FYRVTVALASQTIDGQGMHERLRSGMQLDADIMQERLPLYEWMLEPLR 372


>gi|308048324|ref|YP_003911890.1| toxin secretion, membrane fusion protein [Ferrimonas balearica DSM
           9799]
 gi|307630514|gb|ADN74816.1| toxin secretion, membrane fusion protein [Ferrimonas balearica DSM
           9799]
          Length = 415

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 54/392 (13%), Positives = 131/392 (33%), Gaps = 47/392 (11%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
              G ++ +  ++++    SG I K  V +G  + +G  +           + L +V + 
Sbjct: 57  RVKGFLVPDSGIIKVYPGRSGNIDKIYVSDGQSVQKGDLI---------AKVSLSRVQLN 107

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            +   +                           L+  L    S+  + +   +      L
Sbjct: 108 GIDLSV--------------------------SLISSLESQISSLEQDYKSTLLMSDLDL 141

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                R+     +   LE +  LL+        +      ++    +S+ + + QE+ + 
Sbjct: 142 IELNQRLNDYTESVKVLERQQRLLKEKQHLQNVEYERFSKIYHDGYLSEAEYHLQEQKLL 201

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           +   E+  N       +  IN   +E   E + +  +    L + +R  AD   +L  + 
Sbjct: 202 QIAQEIESNYAN----IVSINSQLNETRAEVSRHPHKTGLMLAEIERRKADVKRQLDEIH 257

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
              + + + +  +G +          +    +P++ I+P          +  +    VK 
Sbjct: 258 NGYQFRVV-ANESGVVTSISV-KEGEFMSAERPILSIIPDGGELIAELLLPTRSAGFVKL 315

Query: 345 GYTATVRFPHYADIREKKFKAIIEKID-PIISQQDNNLQ---TQEYYEVILKITDLAFS- 399
                +RF  +   R     + + ++D  +I Q + ++    ++  Y V  K++    + 
Sbjct: 316 HDEVRLRFEAFPYQRFGHISSEVSRVDKSLIVQGEVDIPVHLSEPVYRVQAKLSRQVINA 375

Query: 400 -DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                 L+ G   E        +L   ++ PI
Sbjct: 376 YGEEFSLKPGMLLEADIILDRRSLLDWLLDPI 407


>gi|254294005|ref|YP_003060028.1| secretion protein HlyD [Hirschia baltica ATCC 49814]
 gi|254042536|gb|ACT59331.1| secretion protein HlyD family protein [Hirschia baltica ATCC 49814]
          Length = 422

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/318 (14%), Positives = 105/318 (33%), Gaps = 12/318 (3%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D   ++ ES  EQ +  L +   +        + S   S    +         +LD    
Sbjct: 107 DRQIESGESLGEQAVQALAEEADSLKDRQAGLLRSAKISADQIVLEEEKAEREQLDARAN 166

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             ++        + +     L EK  + + +  ++E    +  L+  + + +    +   
Sbjct: 167 LQIIERRYEIALERVESALPLMEKGLLPKEEFRRRE----ELKLQTEQAVIDLNGAINRA 222

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +    E  LE A+  + + R+            S+L   +       I +PI+G +   Q
Sbjct: 223 SSRLSELALERASSKENLKRESASIDERLLQIQSQLATAQSQIGY-VIKAPISGRVAALQ 281

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             S    A   QPL+ I+P          V  + I  V+ G    +++      +     
Sbjct: 282 I-SEGERADPQQPLLTILPEGGQLIAELFVPTRAIAFVEPGQEVRLQYDALPYQKFGAAF 340

Query: 365 AIIEKIDPIISQ----QDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
            ++E +          ++     +  Y V + + + +       + L++G         +
Sbjct: 341 GLVESVSATTLSPHELRNGMQTEEAVYRVQVNLNEQSMPAFGKELALQSGMELSADIILE 400

Query: 419 NTTLAQEIIHPITDNWPK 436
              L + ++ P+     +
Sbjct: 401 ERKLMEWLLEPLMATRQR 418


>gi|271501613|ref|YP_003334639.1| biotin/lipoyl attachment domain-containing protein [Dickeya
           dadantii Ech586]
 gi|270345168|gb|ACZ77933.1| biotin/lipoyl attachment domain-containing protein [Dickeya
           dadantii Ech586]
          Length = 274

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 71/212 (33%), Gaps = 10/212 (4%)

Query: 228 LELRENIHEQKNMLRHINELYDEA----NLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            ++ E +      L    +   +A     L      +    ++           S+    
Sbjct: 57  AQVDEVVSATGKTLSQSPQYRVQATATGELNELYIREGQIVNIGDPLMRLDTRSSQEKAP 116

Query: 284 EKTREQKTILS-PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
             T ++ ++++ P+ G + +    +++      + L++I P      I A+V  K +  +
Sbjct: 117 ANTSDELSLVASPVRGMVKHILVDTNNKQVLPGRTLVEITPLDDKLLIEARVQLKDMAFL 176

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSD 400
           + G  A + F  Y        K  IE+I         +     +Y V L+     L   D
Sbjct: 177 RPGQEAVITFAAYDHATFGSLKGYIEQISQDA---MTDPAGHSFYLVQLRTQSNYLGTID 233

Query: 401 NNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
               L  G  A V       TL   ++ PI  
Sbjct: 234 KPQLLLPGMVAHVGIITGRKTLLSYLLKPIRQ 265



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 45/102 (44%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + L  + P  ++    + +  I+ LI W+ +  ++  VS++G+ L++     +++  +G 
Sbjct: 26  EALVEDTPRLIRLSIWIMLAFIMFLIGWADMAQVDEVVSATGKTLSQSPQYRVQATATGE 85

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
           + +  +  G  +  G PL+  +   + +          +L  
Sbjct: 86  LNELYIREGQIVNIGDPLMRLDTRSSQEKAPANTSDELSLVA 127


>gi|315607111|ref|ZP_07882115.1| hypothetical protein HMPREF6485_0866 [Prevotella buccae ATCC 33574]
 gi|315251165|gb|EFU31150.1| hypothetical protein HMPREF6485_0866 [Prevotella buccae ATCC 33574]
          Length = 402

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 135/428 (31%), Gaps = 73/428 (17%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +H A  K +    +  I  LI     + ++I+V SSG +     +  I +P + I++   
Sbjct: 22  HHRAKNKIIYWTVLFFITALIVALPFIYVDITVQSSGVVRPSGEISRITAPMTEIVETVC 81

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            + G  + QG  +L F     T   D +    ++       + + LD L+        A 
Sbjct: 82  AKEGDMLRQGDEILRF----RTSSSDGRIKYQQDREADTQAQITDLDLLSRGLCPHVFAS 137

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +R+++      + H                                         L+  
Sbjct: 138 AARQQEYAKHQSETH----------------------------------------RLQTE 157

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L   + +    K LF K  +S+++ N+                           +  +E 
Sbjct: 158 LRQLETEWKRHKVLFGKGLISESEYNE---------------------HYYRYQDKLNEL 196

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           NL  AN +     +L   +   ++  S LT     +    + SPI GT+         + 
Sbjct: 197 NLLNANRMSAWKTELANLRMQLSETASNLTETRSNKNLYIVRSPINGTLEQFAGIYPGSN 256

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q    +  + P     +I A V P+ I  + +G    V+   +        +  ++ + 
Sbjct: 257 LQIGTTIAMVSP-DTTLHIEAYVAPRDIAFITEGMRVKVQIESFNYNEWGTLEGKVQSVS 315

Query: 372 PIISQQDNNLQTQEYYEVILKITD--LAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEII 427
                  N      YY+V   +    L     N +  ++ G    + F     +L   + 
Sbjct: 316 SDYVSDGN---GNTYYKVKCMLLKKYLELRKQNRKGFVKKGMTGVIHFVVTRRSLFDLLY 372

Query: 428 HPITDNWP 435
             + D   
Sbjct: 373 KSLDDWMN 380


>gi|320326031|gb|EFW82088.1| secretion protein [Pseudomonas syringae pv. glycinea str. B076]
          Length = 378

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 60/408 (14%), Positives = 134/408 (32%), Gaps = 53/408 (12%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
                    ++SG +L E  ++ I SP +G+I +  +  G  +  G  L+          
Sbjct: 6   TFATYTKRTAASGVLLPETGLIRIYSPQAGVITRLDIVEGQHVTDGAVLMALSS------ 59

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                                        D         +  +   + +   + ++  + 
Sbjct: 60  -----------------------------DTQSGEAGGAQRAISLSIKRRQESLAQEIDE 90

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++   + L+ K  ++ ++   +  +  +  L R  L+  +       NL  ++ VS++ 
Sbjct: 91  TLALHLQELEGKKRQVAALETEQQKILAQIDLTRQRLALTKGLAERYANLQRQDYVSRDQ 150

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L +++     + L++R    E    L  +         E        S+ L   +R  A+
Sbjct: 151 LQEKQ----DAVLDMRLRGEELNRSLLTVRAESTRLRAELVELPFNQSKQLADLRRRLAE 206

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +L   E  RE   I +P  G +      S+ +    ++PL+ IVP     +    + 
Sbjct: 207 NQDRLIESETKRE-IFITAPTLGEVTAIAV-SNGSRVDSTRPLLSIVPADAKLHAELYLP 264

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ----------TQE 385
            + +  V+ G T  +R+  Y   R       +  I       D  +              
Sbjct: 265 SRSVGFVRTGDTVMLRYQAYPYQRFGLQPGTVSSISRTALPADEVMTLGNVSEPMREQGP 324

Query: 386 YYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           +Y V + +         +   LR+G   +     +   L + ++ P+ 
Sbjct: 325 FYRVTVALASQTIDGQGMRERLRSGMQLDADIMQERLPLYEWMLEPLR 372


>gi|121634715|ref|YP_974960.1| HlyD family secretion protein [Neisseria meningitidis FAM18]
 gi|304388306|ref|ZP_07370421.1| HlyD family secretion protein [Neisseria meningitidis ATCC 13091]
 gi|120866421|emb|CAM10167.1| putative HlyD family secretion protein [Neisseria meningitidis
           FAM18]
 gi|254670309|emb|CBA05664.1| colicin V secretion protein [Neisseria meningitidis alpha153]
 gi|254673852|emb|CBA09623.1| colicin V secretion protein [Neisseria meningitidis alpha275]
 gi|261393132|emb|CAX50740.1| putative bacteriocin/pheromone secretion membrane fusion protein
           [Neisseria meningitidis 8013]
 gi|304337699|gb|EFM03853.1| HlyD family secretion protein [Neisseria meningitidis ATCC 13091]
 gi|325132359|gb|EGC55052.1| auxiliary transport protein, membrane fusion protein, MFP family
           [Neisseria meningitidis M6190]
 gi|325133574|gb|EGC56235.1| auxiliary transport protein, membrane fusion protein, MFP family
           [Neisseria meningitidis M13399]
 gi|325138458|gb|EGC61024.1| auxiliary transport protein, membrane fusion protein, MFP family
           [Neisseria meningitidis ES14902]
 gi|325142152|gb|EGC64575.1| auxiliary transport protein, membrane fusion protein, MFP family
           [Neisseria meningitidis 961-5945]
 gi|325143799|gb|EGC66115.1| auxiliary transport protein, membrane fusion protein, MFP family
           [Neisseria meningitidis M01-240013]
 gi|325198146|gb|ADY93602.1| auxiliary transport protein, membrane fusion protein, MFP family
           [Neisseria meningitidis G2136]
 gi|325206711|gb|ADZ02164.1| auxiliary transport protein, membrane fusion protein, MFP family
           [Neisseria meningitidis M04-240196]
          Length = 420

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 67/436 (15%), Positives = 145/436 (33%), Gaps = 55/436 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P SL+ +T  ++     L+ + I        + +G++L    VV + S   G+I    V 
Sbjct: 25  PFSLQFLTFFAVSLAAILVAFLIFGSYTNKTTVTGQLLPTTGVVRVYSQDMGVIAHQHVM 84

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           NG  + +G  L T       +   ++          +  E      L+ +  +++K   +
Sbjct: 85  NGDFVKKGDVLFTLSTSRNDNNGSIQ--------ARLLAEAELKKSLSEQEIIMKKRVHA 136

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            E+   +            F   +  V   + M+  R                     ++
Sbjct: 137 AEKTAQENTVHR-------FQNQMQHVRNQIIMQEKR---------------------IA 168

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +K L   + L + +A+S+ + N  E     + LEL+  +   +    ++         
Sbjct: 169 ISEKMLEKQRYLAKMDAISELEKNSYE----IALLELKAGLAAYQREADNLAREITVQQS 224

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              N  ++ + ++ Q +R  +    ++   ++  EQ  I + I+G +    +        
Sbjct: 225 NLKNLPEQQATEISQLERAVSVYQQEILDYQQRNEQT-IRATISGYVSSINT-EIGQQVD 282

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            ++ LM IVP          V  + I  VK      +R+  Y   +    +  +  I   
Sbjct: 283 TNKLLMSIVPKESELLANLYVPSRAIGFVKPNDKVILRYQAYPYQKFGHAEGHVISIAQT 342

Query: 374 ISQ-----------QDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNT 420
                                +  Y + +K+ +          +L+ G   E     +N 
Sbjct: 343 ALGAQEWTNLGNIFTQTAQVNEPVYLIKVKLDNQHIRIYGTEKKLQIGMILEADILHENK 402

Query: 421 TLAQEIIHPITDNWPK 436
            L + I+ P+     K
Sbjct: 403 RLYEWILDPLYQVMGK 418


>gi|254563399|ref|YP_003070494.1| secretion protein [Methylobacterium extorquens DM4]
 gi|254270677|emb|CAX26681.1| putative secretion protein [Methylobacterium extorquens DM4]
          Length = 429

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 51/429 (11%), Positives = 141/429 (32%), Gaps = 54/429 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P +++ +  L +   + +  ++ L      V + G +  +  ++ + SP +G +     +
Sbjct: 27  PLAIRVVVGLCLAFAVLVGVYAWLGSYTRRVHADGLLAPDIGLITVASPLAGRVSASGAK 86

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +G  L T +                            LD ++        A   
Sbjct: 87  EGDRVERGQLLFTID----------------------------LDAVS--------ASGP 110

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            +E+++  LG+   +  +      +      +    ++ ++   R  +E + +L   L+ 
Sbjct: 111 TQERVIAQLGRQRESVERQRAARAAMATAEKEGLREQVANLEAQRARIEEQLALQEKLVP 170

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +     + +L  +      D   Q        L+    + + +     +     +   
Sbjct: 171 PLKSRADELADLVTRGFARAADFQSQ----NYLYLQASSQLAQFRQGGLQVEGKLGDLRA 226

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + A + + ++RDL +  RT A ++ +     + R    + +P  G +   ++ +      
Sbjct: 227 KLATFDETLARDLAELDRTAA-QLEQQRAESEARRAIEVRAPERGILTSIRAQA-GQTVA 284

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP- 372
               L+ ++P          V    I  ++ G +  +R+  +   R    +  + ++   
Sbjct: 285 AGANLLTLLPSEGRLQANLFVDSSAIGFIEPGASVMLRYAAFPFQRFGLHRGTVTEVTRA 344

Query: 373 ---------IISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                           N      Y +I++    + +       L  G   E     +   
Sbjct: 345 PLEGDARPEAARDTAKNAGNGGVYRIIVRPDADSVTAYGEQRRLEAGMRVEADIALEKRP 404

Query: 422 LAQEIIHPI 430
           L + ++ P+
Sbjct: 405 LYRWLLDPL 413


>gi|163853470|ref|YP_001641513.1| secretion protein HlyD family protein [Methylobacterium extorquens
           PA1]
 gi|218532327|ref|YP_002423143.1| secretion protein HlyD [Methylobacterium chloromethanicum CM4]
 gi|240140889|ref|YP_002965369.1| putative secretion protein [Methylobacterium extorquens AM1]
 gi|163665075|gb|ABY32442.1| secretion protein HlyD family protein [Methylobacterium extorquens
           PA1]
 gi|218524630|gb|ACK85215.1| secretion protein HlyD family protein [Methylobacterium
           chloromethanicum CM4]
 gi|240010866|gb|ACS42092.1| putative secretion protein [Methylobacterium extorquens AM1]
          Length = 429

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 51/429 (11%), Positives = 141/429 (32%), Gaps = 54/429 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P +++ +  L +   + +  ++ L      V + G +  +  ++ + SP +G +     +
Sbjct: 27  PLAIRVVVGLCLAFAVLVGVYAWLGSYTRRVHADGLLAPDIGLITVASPLAGRVSASGAK 86

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +G  L T +                            LD ++        A   
Sbjct: 87  EGDRVERGQLLFTID----------------------------LDAVS--------ASGP 110

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            +E+++  LG+   +  +      +      +    ++ ++   R  +E + +L   L+ 
Sbjct: 111 TQERVIAQLGRQRESVERQRAARAAMATAEKEGLREQVANLEAQRARIEEQLALQEKLVP 170

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +     + +L  +      D   Q        L+    + + +     +     +   
Sbjct: 171 PLKSRADELADLVTRGFARAADFQSQ----NYLYLQASSQLAQFRQGGLQVEGKLGDLRA 226

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + A + + ++RDL +  RT A ++ +     + R    + +P  G +   ++ +      
Sbjct: 227 KLATFDETLARDLAELDRTAA-QLEQQRAESEARRAIEVRAPERGILTSIRAQA-GQTVA 284

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP- 372
               L+ ++P          V    I  ++ G +  +R+  +   R    +  + ++   
Sbjct: 285 AGANLLTLLPSEGRLQANLFVDSSAIGFIEPGASVMLRYAAFPFQRFGLHRGTVTEVTRA 344

Query: 373 ---------IISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                           N      Y +I++    + +       L  G   E     +   
Sbjct: 345 PLEGDARPEAARDTAKNAGNGGVYRIIVRPDADSVTAYGEQRRLEAGMRVEADIALEKRP 404

Query: 422 LAQEIIHPI 430
           L + ++ P+
Sbjct: 405 LYRWLLDPL 413


>gi|113474477|ref|YP_720538.1| secretion protein HlyD [Trichodesmium erythraeum IMS101]
 gi|110165525|gb|ABG50065.1| secretion protein HlyD [Trichodesmium erythraeum IMS101]
          Length = 360

 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 42/319 (13%), Positives = 99/319 (31%), Gaps = 29/319 (9%)

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           A+        +++   E + + +     +       +     S++ R       +++   
Sbjct: 57  AIARPIGDVRIVQAPTEGKIDSIEVNENQVVHEGDAIARIDESALSRQKTQLQEKIQQCD 116

Query: 176 LNRLDLENKSSLLRALLSSHQK----DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +    +  + S L   + +  +           + E N + ++               + 
Sbjct: 117 IELEQINQQISALEVQILATARPQTFQYQSQFTIAENNKIDKS--------------SIE 162

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             I E    L  + + + +   +      E+ ++L    R      +KL           
Sbjct: 163 SAILELSLSLPKVAQQFAKDRRDLIVKRTELIKELTAGNRELEQVNAKL-------NNSV 215

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I++P  GTI      +     +    + +IVP++     +A+VT   I  VK G    +R
Sbjct: 216 IIAPANGTIFKLSLRNPGQTVESGAAIAQIVPNNAHIVFKARVTAADIAKVKIGQPVQIR 275

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGF 409
              Y        K  +  I P        +  + YYEV ++           +  ++ G 
Sbjct: 276 VSAYPFPDYGILKGTVRSISPDAIAHQ--VLKEAYYEVTIEPEKPYLVKGGSQYLIQPGM 333

Query: 410 PAEVLFTAKNTTLAQEIIH 428
                  +   T+   ++ 
Sbjct: 334 EGRADIISSQETVLTFVLR 352



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 68/194 (35%), Gaps = 15/194 (7%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEIS-----VSSSGEILNEDNVVEIKSPFSGIIKK 69
           +   ++  + ++G  G    + +  I +      V +        +V  +++P  G I  
Sbjct: 23  SRWNKIGGMFLLGTFG----AAIALISLVKYNPTVRTEAIARPIGDVRIVQAPTEGKIDS 78

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            +V     + +G  +   ++   +      +  I+     ++     +  L      ++ 
Sbjct: 79  IEVNENQVVHEGDAIARIDESALSRQKTQLQEKIQQCDIELEQINQQISALE-----VQI 133

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLL 188
              +R +          +  +K+    I S    L + L ++   +   R DL  K + L
Sbjct: 134 LATARPQTFQYQSQFTIAENNKIDKSSIESAILELSLSLPKVAQQFAKDRRDLIVKRTEL 193

Query: 189 RALLSSHQKDLTMM 202
              L++  ++L  +
Sbjct: 194 IKELTAGNRELEQV 207


>gi|229136635|ref|ZP_04265315.1| hypothetical protein bcere0014_54590 [Bacillus cereus BDRD-ST196]
 gi|228646830|gb|EEL02985.1| hypothetical protein bcere0014_54590 [Bacillus cereus BDRD-ST196]
          Length = 434

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 57/422 (13%), Positives = 155/422 (36%), Gaps = 20/422 (4%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+RN P  +  +     + ++G I W+ +  ++I    +  +  + N+  I++   GI+ 
Sbjct: 14  LERNPPRFIAILLSALFLCLLGFIVWAYVGKMDIVSKGTAIVEGKSNISTIRTQILGIVD 73

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V++G ++ +G  LL  ++      +  K+  + ++  H++ +K+ L+ L    +  +
Sbjct: 74  TVSVQSGDEVKKGEVLLQLKN----QELIGKQNQLNDIIKHVEEQKAMLEQLKKSIESEK 129

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL------KMKLTRMRSIYLNRLDLE 182
             F    +Q +    K +    +       +  +SL        +   ++ + + + +++
Sbjct: 130 ALFSEGLDQKIRDEYKAYEQGYQALEKEQENEIKSLMNNKLSNEQDEVLQGLLVEKENIQ 189

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +    +      Q     +  L EK    +      E+ + +  + L    ++ ++   
Sbjct: 190 RELKSTQKQKQKEQLLPEQIDPLNEKIQSLEAQQTSVEKRIEQRKVTLESERNKIESAKE 249

Query: 243 HINELYDEANLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
              E    A L++  N +  +++ ++  ++    +  +L  L    E   I +P  G I 
Sbjct: 250 GKQEQKKYALLQYKENAIVSVNQRIQSVEQELFVKKQELNSLHHQSETTVIKAPTDGIIQ 309

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
            +    + +     Q ++ I+P      I+  +  ++++ +KKG         +   +  
Sbjct: 310 LSSILQTGDLVDPGQEVISIIPKESSKKIKVLLPAQEVKGIKKGDKVQY---SFKLKKTD 366

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           K    +  I        ++       E  +   +        EL  G            +
Sbjct: 367 KQVGTVTYISVHPIFDKDSKTYMHELEASIDTNEFD------ELHIGMVGRASVVTGEES 420

Query: 422 LA 423
           + 
Sbjct: 421 IW 422


>gi|258546295|ref|ZP_05706529.1| probable secretion protein [Cardiobacterium hominis ATCC 15826]
 gi|258518466|gb|EEV87325.1| probable secretion protein [Cardiobacterium hominis ATCC 15826]
          Length = 420

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 59/401 (14%), Positives = 137/401 (34%), Gaps = 59/401 (14%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +  GE++    V+++  P  G I+  +V++G+++ +G  L        T   D +   +
Sbjct: 55  ATVYGELVPVSGVIKVYPPQGGRIEAVEVQSGARVAKGAVLARINSAVDTAGGDTQARVL 114

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             L+   D  +  L                                        +   + 
Sbjct: 115 AALQAQHDALQENL-------------------------------------GRNARAQKE 137

Query: 164 LKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
              ++T  R     +   L  +  LL +      K+    K L +++ V++    ++ + 
Sbjct: 138 YAAQMTGRREALATQAQMLAGQEKLLASRQGLAAKNEVRYKRLMQQDYVARESYEERVQE 197

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE---ISRDLEQNQRTFADEMSK 279
                ++L++   E++++ + +  L +E + +  ++ +E   +SR L Q +   A+  S+
Sbjct: 198 RLSLDVQLQQAKRERQSVAQQLLSLDNERSQQLDSFSREAHELSRQLAQVEAQIAETESR 257

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
             +L        + +P  G +       +   A  +QPL+ +VP               +
Sbjct: 258 QAVL--------LRAPQDGVVSALFV-EAGQQAAVNQPLLALVPEDARYEADLYALSHNM 308

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKID-------PIISQQDNNLQTQEYYEVILK 392
             V  G T  VR+  Y   +  ++ A +  +         +       LQ Q  Y +   
Sbjct: 309 GFVHPGQTVYVRYGAYPYQKFGQYAATVRDVAKTASPLNELTDTVFPALQGQSVYRIRAD 368

Query: 393 ITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           +             L  G   E     +   + + ++ P+ 
Sbjct: 369 LAQDFVLAYGEKQPLMAGMQFEADIVQEKRRIFEWMVEPLF 409


>gi|312792541|ref|YP_004025464.1| secretion protein hlyd family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179681|gb|ADQ39851.1| secretion protein HlyD family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 466

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 68/447 (15%), Positives = 159/447 (35%), Gaps = 41/447 (9%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     +T + +  IIGL+ WSI+  I+I+V   G I   ++   I S   G +K+  V+
Sbjct: 23  PKYGLFITYILLALIIGLVLWSIVGEIDINVKVQGIIRPWEDEARIISYVGGKVKEIFVK 82

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALD------------ 118
            G  + +G  L   +D E     DL K  ++        +   + +++            
Sbjct: 83  EGEYVKKGEVLFKIDDEEYVKKRDLLKQQLREYEKKVSDLKELRKSIEKGESLRNKNNVY 142

Query: 119 ---------FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN-YGISSVYRSLKMKL 168
                     +N      E+    RE  ++DF  +  S   K+ N     S  + +K  +
Sbjct: 143 YLRYLSYSYEVNKLKKAAEEERVQREYSIMDFKKQIESLDEKIKNIDKFESTLKEIKEIV 202

Query: 169 TRMRSIYLNRLDLE------NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            +   I L + D+       ++  +    +     D ++ + +       +  L++  + 
Sbjct: 203 DKGEQIKLAKYDIGYMGFILSEIEVYNQQVKIKSDDSSIQRKILISKI--ETKLDELRQS 260

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
             +  L+ ++   + K +    ++   +      + L++I  ++        +    L  
Sbjct: 261 KSELILQKQKIEGQIKLLNISSDDAKGDIEKYKLDVLQQIDNEISNLSNEIKNLKISLDE 320

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL-TYIRAKVTPKQIQH 341
            EK  E   I +   G + Y+    S         + +IV        +   +   +   
Sbjct: 321 TEKLIESCNIRAEKDGYVEYSSEMVSGVVVSSGTEIGRIVNSQAKGFKVIGYIPNTKSSG 380

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           ++ G    V+      +     +  + ++   I  +  +   Q +YEV  ++ ++     
Sbjct: 381 IEIGQRVKVKLTGADGLN--VVEGKVTRVSRDI--KVASQSGQGFYEVEAEVKNV---PT 433

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I L+ G   E+    +   + + ++ 
Sbjct: 434 GINLKAGQACEMSIVVEQKRVIEWVLE 460


>gi|222528293|ref|YP_002572175.1| secretion protein HlyD family protein [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455140|gb|ACM59402.1| secretion protein HlyD family protein [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 466

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 74/446 (16%), Positives = 164/446 (36%), Gaps = 39/446 (8%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     +T + +  +IGL+ WS++  I+I+V   G +   ++  ++ S   G +K+  V+
Sbjct: 23  PRYGLFITYILLALVIGLVLWSVVGKIDINVKVQGIVRPLEDEAKVVSYVGGKVKEVFVK 82

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD--------------- 118
            G  + +G  L   +D E     D  K  +      ID  K                   
Sbjct: 83  EGEYVKKGDILFKIDDEEYVKRRDFLKQQLSEYEKRIDDLKELRKSIEKGENLGNKNNAY 142

Query: 119 ---------FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN-YGISSVYRSLKMKL 168
                     +N      E+A   RE  ++DF  +  S   K+ N     S  + +K  +
Sbjct: 143 YLRYLSYSYEINKLKKAAEEARVQREYSIMDFKKQMESLDEKIKNIDKFESTLKEIKEVV 202

Query: 169 TRMRSIYLNRLD---LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND--LNQQERIV 223
           ++   + L + D   LE   S +       +  L    N+  +  + + D  L++  +  
Sbjct: 203 SKGEQVKLTKYDIGYLEFILSEIEVYNQQVKTKLDGS-NIHNEILILKIDSKLDELRQSK 261

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +  L+ ++   + K +    ++  +E      + L++I  ++        +    L   
Sbjct: 262 SEIILQKQKIEGQLKLLNISGDDTKEEIEKYKFDVLQQIDNEINNLTSEIKNLKISLEET 321

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL-TYIRAKVTPKQIQHV 342
           E+  E  +I +   G + Y+    +         + +IV        +   +   +   +
Sbjct: 322 ERLIESCSIKAEKDGYVEYSSEILNGAAVNSGAEIGRIVGSGSRGFRVIGYIPNTKGGSI 381

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           + G  A V+      ++    +  + ++   I  +  +   Q +YEV +++  +      
Sbjct: 382 EIGQRAKVKIAGADGLK--VVEGKVVRVSQDI--KVASQSGQGFYEVEVEVKKV---PKG 434

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIH 428
           I LR G   E+   +K   L + ++ 
Sbjct: 435 INLRAGQACEMSIVSKQERLIEWVLD 460


>gi|167623923|ref|YP_001674217.1| toxin secretion, membrane fusion protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167353945|gb|ABZ76558.1| toxin secretion, membrane fusion protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 415

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 70/419 (16%), Positives = 150/419 (35%), Gaps = 50/419 (11%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
             + L+ I+ I+  ++ S     E      G ++ +  +++  +  SG I    V  G  
Sbjct: 33  ATVLLVIIVAIVFFLSLSHYARKETV---RGYLVPDKGLIKTYANRSGNIDVLHVSEGDI 89

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           I +G+PL T   + +  ++  +++S   +                               
Sbjct: 90  IKKGSPLATI--VLSRSMLSGEELSESLI------------------------------D 117

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            L       +T  KV    ++   + LK  +T  +      ++LE   +LL   L+   K
Sbjct: 118 ELKLQLTLLTTEQKVNQSLLAKETQRLKNSITDNKQALNVSVNLE---ALLTEKLALQVK 174

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             T  + LF+   +S  D   Q++ +    + +R+ I   K+    I    ++A  E   
Sbjct: 175 QQTQHQKLFDDGYLSTLDYQSQQQKL----IAVRQEIENLKSNQVQIRSQLNDALSELDI 230

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
              +        +R  ++   ++   E +  +  I +  AGT+   Q      +   ++P
Sbjct: 231 LPSQFVLKDGDIERRRSELKRQIDETENSY-RFVIRAAEAGTVASIQIV-EGEFIATNRP 288

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM ++P   L      +  +    VK G  A +RF      R    ++ + +ID  +   
Sbjct: 289 LMSLIPQGALLVAELLLPTRSAGFVKSGDEARLRFDAIPYQRFGFLESRVSRIDKALLLD 348

Query: 378 DNNLQT----QEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                     +  Y +  +++        ++  L++G   E        +L   ++ PI
Sbjct: 349 GEAKVPVALSEPVYRIRTQLSKQDMLAYSDSFPLKSGMLLEADIVLDRRSLLDWLLDPI 407


>gi|332665186|ref|YP_004447974.1| hypothetical protein Halhy_3241 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332334000|gb|AEE51101.1| hypothetical protein Halhy_3241 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 459

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 65/431 (15%), Positives = 138/431 (32%), Gaps = 53/431 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQV 72
           +     L  +  +   + W        ++ S G++     E     ++S  +G I+K+ V
Sbjct: 34  ARWMGGLFVLAVVFLFLPW------TQNIQSKGKVTTLRPEQRPQTVQSTIAGQIEKWYV 87

Query: 73  ENGSQILQGTPLLTFEDIETT----DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             G  + +G  +L   +I+       ++   +  +      I   +     L ++ +   
Sbjct: 88  REGDTVRKGDTILHLTEIKADYFDPQIVQRTQKQVNAKTGSIGAYQRKATALQDQINAYR 147

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +    +  QL     K   T  K+    I+     L   +         R+ L+   +L 
Sbjct: 148 EELTQKRNQL---QNKLQQTRLKIITDSIAFRRAILDDSIA--------RVQLKRTDALF 196

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  +    +               +  + + E  V  +  +L  +  + + +   +++  
Sbjct: 197 RDGIKPRTEVEDK-----------RFKVQETEAKVVDARNKLNISRQDLQILRTELSQAI 245

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT---ILSPIAGTIVYNQS 305
            E   + A    +I+        T AD       +E  R++     +L+P  G I     
Sbjct: 246 AETAQKIAKAESDIASARSDQYTTEADISKLEIQVENYRQRNEFYFVLAPQDGIIAKAMQ 305

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT--------VRFPHYAD 357
                  +    ++ I+P      +   V P     V  G            + F  +  
Sbjct: 306 AGIGENIKDGDAIVSILPLEYTLAVEMYVKPLDYPLVNLGQEVRFLFDGWPAIVFSGWPG 365

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                FK  +  ID IIS           Y +++   ++        LR G  A+ +   
Sbjct: 366 FSFGTFKGDVVAIDNIISDNGM-------YRILVAPDEVNGKPWPKALRPGSGAQGIALL 418

Query: 418 KNTTLAQEIIH 428
           +N TL  E+  
Sbjct: 419 QNVTLWYELWR 429


>gi|257483963|ref|ZP_05638004.1| secretion protein [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|331012983|gb|EGH93039.1| secretion protein [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 378

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/408 (14%), Positives = 133/408 (32%), Gaps = 53/408 (12%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
                    ++SG +L E  ++ I SP +G+I +  +  G  +  G  L+          
Sbjct: 6   TFATYTKRTAASGVLLPETGLIRIYSPQAGVITRLDIVEGQHVTDGAVLMALSS------ 59

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                                        D         +  +   + +   + ++  + 
Sbjct: 60  -----------------------------DTQSGEAGGAQRAISLSIKRRQESLAQEIDE 90

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++   + L+ K  ++ ++   +  +  +  L R  L+  +       NL  ++ VS++ 
Sbjct: 91  TLALHLQELEGKKRQVAALETEQQKILAQIDLTRQRLALTKGLAERYANLQRQDYVSRDQ 150

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L +++     + L++R    E    L  +         E        S+ L   +R  A+
Sbjct: 151 LQEKQ----DAVLDMRLRSEELNRSLLTVRAESTRLRAELVELPFNQSKQLADLRRRLAE 206

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +L   E  RE   I +P  G        S+ +    ++PL+ IVP     +    + 
Sbjct: 207 NQDRLIESETKRE-IFITAPTLGEATAIAV-SNGSRVDSTRPLLSIVPADAKLHAELYLP 264

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ----------TQE 385
            + +  V+ G T  +R+  Y   R       +  I       D  +              
Sbjct: 265 SRSVGFVRTGDTVMLRYQAYPYQRFGLQPGTVSSISRTALPADEVMTLGNVSEPMREQGP 324

Query: 386 YYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           +Y V + +         +   LR+G   +     +   L + ++ P+ 
Sbjct: 325 FYRVTVALASQTIDGQGMHERLRSGMQLDADIMQERLPLYEWMLEPLR 372


>gi|170728136|ref|YP_001762162.1| secretion protein HlyD family protein [Shewanella woodyi ATCC
           51908]
 gi|169813483|gb|ACA88067.1| secretion protein HlyD family protein [Shewanella woodyi ATCC
           51908]
          Length = 419

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 62/429 (14%), Positives = 140/429 (32%), Gaps = 47/429 (10%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P   + + +L  + + GL+ +  +          G I  +  +V++ +   G I +  V+
Sbjct: 32  PKEYQWIAILMFLVVSGLLVFLFVGTYTKYADVFGVITVDKGLVKVSARREGQIIEQMVK 91

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +G  L        +                                 L++    
Sbjct: 92  QGDSVTKGDLLYVISTDRHSSF----------------------------DQNLDQTILI 123

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           ++ +L   L +      +     ++ +   +  K T +  I       + +  L  A L+
Sbjct: 124 QQMELQSSLERDLKIAEEASGLELALIKSKILSKTTEIEQINAQLAIYDQRVELSGAGLA 183

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
            ++K       L +    +Q  L++    V +  L L+   ++    L     L  E + 
Sbjct: 184 RNEK-------LLKAGHTNQAQLDK----VIEDHLALQSKRNDLLMKLNSTQSLLAELSN 232

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E             + +R   +   ++T +    + + I +P+ G I  +Q      + +
Sbjct: 233 ELELKPGIFKEKHNRLKRNLIENKQRITEVSSNIDYR-IYAPLTGVI-GSQLTHVGEFVR 290

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               ++ ++P          V    I  +K     ++R+  +           +  +  +
Sbjct: 291 PGNTMVSLIPEGSKLQAELYVPATSIGFIKPEQEVSMRYSAFPYQHFGLHSGRVLSVSKV 350

Query: 374 ISQQDNNLQ----TQEYYEVILKITDLAFSDNNIELR--NGFPAEVLFTAKNTTLAQEII 427
           IS  +        T   Y+VI+ +   + S    EL    G   E     +N +L Q I+
Sbjct: 351 ISLPEELETSVELTGAVYKVIVGLDSQSVSAQGEELTLGVGMELEASVKLENRSLVQWIL 410

Query: 428 HPITDNWPK 436
            PI     +
Sbjct: 411 EPIYSLRNR 419


>gi|84386360|ref|ZP_00989388.1| toxin secretion, membrane fusion protein [Vibrio splendidus 12B01]
 gi|84378784|gb|EAP95639.1| toxin secretion, membrane fusion protein [Vibrio splendidus 12B01]
          Length = 413

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 69/429 (16%), Positives = 154/429 (35%), Gaps = 55/429 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P SL  +++++ I ++ +  +          +  G +L +  VV++ S   G++++  
Sbjct: 22  TQPPSLYLISIITFIIVLLVSIFLAKYNYSRKETVKGYLLPKMGVVKVYSGRKGVLEELF 81

Query: 72  VENGSQILQGTPLLTFEDIET-TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           V  G+ IL G P+    + ++    ++L     K ++  I      L+            
Sbjct: 82  VNEGNHILAGNPIAKIRNSQSMVSGMELSTALSKEIKSQIKAMSHELE------------ 129

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                            T   VF      + R L         +  + L ++N  S  + 
Sbjct: 130 -----------------TNEIVFFKDKQRIDRQLI-------QLEKSLLSIKNTRSTSQQ 165

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            L+   + L   + L +K  +S    + + ++  I  ++  +L ++I      +  +   
Sbjct: 166 RLALKDQKLKNNQKLHQKGFLSSTLFSSIQEEYLIALEAVDKLEQDISSISLEISTLKS- 224

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            D+  L   N LK+++      QR  +    +L  L+   E     +P +G +   Q  +
Sbjct: 225 -DKIALPDLNTLKQVA-----IQRQISKLKEQLIELDNQYEFVK-NAPESGVVTAIQ-PT 276

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                    P++ I+P +    I   +  +    V+ G    +RF  +   +       +
Sbjct: 277 VGTQIDTDTPILSIIPDNSPLEIELLLPTRSAGFVQLGDLVKIRFHAFPYQKFGLAHGKV 336

Query: 368 EKIDPIISQQDNNLQT----QEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
             ID  +    + +      +  Y V + +     S    +  L+ G  A+     +  T
Sbjct: 337 INIDQALILPTDTILPIKIEEAIYRVRVSLNKQEISAYGKSFPLKVGMLADADIILEKRT 396

Query: 422 LAQEIIHPI 430
           L + ++ PI
Sbjct: 397 LLEWLLDPI 405


>gi|291524246|emb|CBK89833.1| hypothetical protein EUR_06440 [Eubacterium rectale DSM 17629]
          Length = 490

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 70/467 (14%), Positives = 168/467 (35%), Gaps = 56/467 (11%)

Query: 14  PASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P      T+  I  I+ + + W  L  ++I V +      +D+   +    +G I K  V
Sbjct: 22  PNRFVPYTIYIICAILAIALIWMYLFRMDIVVKADSVFRGDDDSTAVSCAVTGKITKMSV 81

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFLNNKYDVLE- 128
           ++G  + +G  L   +       I+  K  + +++  +D     + +LD  N+++D +  
Sbjct: 82  KDGQYVSEGDELYEIDIENLGSTIEDYKSKLDSVQQRLDILNAYQKSLDGDNSEFDAMSD 141

Query: 129 ----KAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI-------- 174
                 F+ R+E L   +  GK  +   +V++  I+ +  S+     ++  +        
Sbjct: 142 NQYYSEFKDRKELLNTSIDAGKEKNKTGEVYDENITVINDSIDKYNEKINKLNNVKQCII 201

Query: 175 ---------------------------YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                                       L   + ++++++  + L+    +     +  E
Sbjct: 202 SRNNTFDQNDTYYYSIVKSYISSYDYTALQYDNKKDETTMDSSQLAEVDTEKNQALSNLE 261

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL--YDEANLEFANYLKEISRD 265
            N +S  +  QQ     +    L+ NI   +   +        DE++++       +S +
Sbjct: 262 SNEISTIE--QQIETANEQIESLKSNISSVELQKKQTENSNNTDESDIKILTEKGNVSAE 319

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           +   +    +  + L   +      TI +  +G    N+  S+  Y Q+   + +I P  
Sbjct: 320 ILTYEDKKQEYEAYLKDYDIKNNNCTIKAGTSGYFYTNKEISNGTYIQEGDSIGQIYPKE 379

Query: 326 KL-TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +   Y +  V    I  +K           Y       F   +++I   ++   N     
Sbjct: 380 QSGYYAQVYVENSDIAKIKPDQEVKFEMASYPSSEYGYFTGTVKEIAKDVTVDQNT--GN 437

Query: 385 EYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIH 428
            YY V ++  ++   + + E   L++G  A+      + ++   ++ 
Sbjct: 438 AYYVVKVECKNMEIKNKDGEKGNLKSGMAAQAKIVVDDDSVLHFVLD 484


>gi|222081180|ref|YP_002540543.1| protein secretion protein [Agrobacterium radiobacter K84]
 gi|221725859|gb|ACM28948.1| protein secretion protein [Agrobacterium radiobacter K84]
          Length = 412

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/423 (14%), Positives = 134/423 (31%), Gaps = 48/423 (11%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S   MT +  + ++   T+ +        +  G I     + ++ +   GI+ +  V 
Sbjct: 26  PMSHGVMTAILGVFVVVGATYLMTGTYARKETVQGYIAPTGGLAQLYATKGGIVTRVLVH 85

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + QG P++      T     + +      +  I +  + +     ++D   +   +
Sbjct: 86  EGDVVTQGQPMVELSLETTGADGQVGEKLRSETQARIQSIDTQITAAKARFDEEGRRLSA 145

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R E                   G+     S + +L   R +   + D   + + L+    
Sbjct: 146 RVE-------------------GLGGELASQEQRLESERRLQALQTDDAGRYAQLQI--- 183

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
                         K + ++ +L+++++ +          I+E +          ++A  
Sbjct: 184 --------------KGSGTRFELSRRQQQILAQE----SVIYELERQKEQRQGDLNDARS 225

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + A    E    L Q Q   ++    L  L+  R    + +P+AG +   Q+      A 
Sbjct: 226 QLAGLPAERDDKLAQLQGLRSELEQSLAQLQVNRAYVMV-APVAGRVAALQA-QPGQTAV 283

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              PL  +VP          V P+    ++ G    +R   +   R       + ++   
Sbjct: 284 AQSPLAALVPAGSNLEANLLVPPRAAGLIQPGQEVRLRVDAFPYQRFGVVSGHVVQVSRA 343

Query: 374 ISQQDNNLQT----QEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
             ++   L         Y V + +  T +A       L  G                 ++
Sbjct: 344 TYREGELLAPIAFKDPVYRVTVSLERTSIAAYGEERPLTPGMTLIGDVITDRRHFTDWVL 403

Query: 428 HPI 430
            P+
Sbjct: 404 DPL 406


>gi|218902291|ref|YP_002450125.1| hypothetical protein BCAH820_1173 [Bacillus cereus AH820]
 gi|218539012|gb|ACK91410.1| conserved hypothetical protein [Bacillus cereus AH820]
          Length = 442

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/388 (14%), Positives = 143/388 (36%), Gaps = 10/388 (2%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            V + G +   +    + S   G+I +   ++G  + +G  +L           +  K  
Sbjct: 50  VVKAQGVVAVNETS-YVASKGYGVINEIYAKSGDYVKKGDRILVISSGNEGVQANAIKEQ 108

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I++L   I+        L  K + L++    +E +    +  Y  +  +  NY ++S+  
Sbjct: 109 IRDLEETIEVMDRYKQSLMKKENTLKQ--NGKEMEYYSKINYYLDSVKR-ENYEVNSIKD 165

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE-- 220
            +  K+  +  +     +L+++   L  L    +K+  +  +      +S N+  + E  
Sbjct: 166 QMNEKVKEVDKLDKEINELQSQLEQLN-LNKEDEKNYNLELSDNNSGTISNNEGKKSEIK 224

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             +     E +  ++E K + + +     ++       L E+ +   Q      +  +  
Sbjct: 225 GYLDAKKTEKKGLLNEVKQLEQQVKSPSSKSTELLNQLLSELGQSRNQASSKIIELTANF 284

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              ++      +++  +G + Y    +     QQ+Q L +I    +  YI A +  +   
Sbjct: 285 GASKEQDSIHNLIASQSGVLHYPNPLAKGMSIQQNQILGEIASEEEDFYIDAYIPAQDRS 344

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            VK+G    V      + R       ++ I+P   + +++ +   YY   +K+ + +   
Sbjct: 345 RVKEGNPVEVSIIGVNNHRFGSLSGSVKFIEPGTLKDESSKEKMIYYRTNVKLGETSLKS 404

Query: 401 NN---IELRNGFPAEVLFTAKNTTLAQE 425
            +   +EL    P E        +  + 
Sbjct: 405 KSGEVVELMRSMPVEARIVYAEESYLEW 432


>gi|293607369|ref|ZP_06689708.1| auxiliary transporter [Achromobacter piechaudii ATCC 43553]
 gi|292814213|gb|EFF73355.1| auxiliary transporter [Achromobacter piechaudii ATCC 43553]
          Length = 436

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 58/427 (13%), Positives = 135/427 (31%), Gaps = 53/427 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S   +T +    ++ +  +          + SG++  +  ++++  P SG++ + +V 
Sbjct: 44  PVSFAWVTGVLGGFVVLVCLFLAFGAYTKRATVSGQLAPDTGLLKLYVPQSGVVLERRVG 103

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L        + + D ++V    +R  +D+ +                   
Sbjct: 104 EGEHVNAGDVLYVVSGDRQSAVGDTQQVISGQIRQRLDSLR------------------- 144

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
              Q  +           +   G++ +   L                ++ +    R  + 
Sbjct: 145 ---QAREKTLALQQGERDLLTAGVAGLRAQLTA--------------IDLQIDGQRGRIK 187

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q      + L +K  +S  + + +   + +   +L+  + ++  +   ++        
Sbjct: 188 LAQDSAQRYRALMDKGYLSPEESDLKRAELLEQRNQLQALLRDRIGLAMELSSR----QA 243

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A+        L Q  R  A    +LT  E  R Q  + +P AG +    +        
Sbjct: 244 ALADLGLRQQNQLGQLDRDLAGVAVELTQSE-ARRQLRVTAPQAGVLTSMTAD-VGQSVD 301

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-- 371
             +PL  +VP             + +  V  G    +RF  Y      +   +++ +   
Sbjct: 302 TVRPLATLVPDGATLLAELYAPSRAVGFVAPGDAVLMRFAAYPYQTYGQQAGVVQSVTQS 361

Query: 372 -------PIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTL 422
                     +  + N  ++  Y + + +   A       + LR G   E     +   L
Sbjct: 362 ALPEWQLRDGAPANANSASEPMYRITVSLDSPARGPQGQALALRPGMRLEADLLQQKRRL 421

Query: 423 AQEIIHP 429
            Q  I P
Sbjct: 422 YQWAIDP 428


>gi|312623324|ref|YP_004024937.1| secretion protein hlyd family protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203791|gb|ADQ47118.1| secretion protein HlyD family protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 466

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 77/445 (17%), Positives = 166/445 (37%), Gaps = 37/445 (8%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     +T + +  IIGL+ WSI   I+I+V   G I   ++  ++ S   G +K+  V+
Sbjct: 23  PRYGLFITYILLALIIGLVLWSIAGKIDINVKVQGIIRPWEDEAKVISYVGGKVKEVFVK 82

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD--------------- 118
            G  + +G  L   +D E     DL +  +      ID  K   +               
Sbjct: 83  EGEYVKKGEVLFKIDDEEYVKKRDLLRQQLGEYEKKIDDLKELRNSIEKGESLRNKNNAY 142

Query: 119 ---------FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN-YGISSVYRSLKMKL 168
                     +N      E+A   RE  ++DF  +  S   K+ N     S  + +K  +
Sbjct: 143 YLRYLSYSYEVNELRKAAEEARVQREYSIMDFKKQTESLDEKIKNIDKFESTLKEIKEIV 202

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNAVSQND--LNQQERIVY 224
            +   I L + D+     +L  +   +Q+    +   ++ +K  VS+ D  L++ ++   
Sbjct: 203 DKGEQIKLAKYDIGYLGFMLNEIEVYNQQVKAKLDGSDIQKKILVSKIDSKLDELKQTKN 262

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           +  L+ ++   + K +    ++   +      + L++I  ++        +    L   E
Sbjct: 263 ELILQKQKVEGQLKLLNISGDDTKGDIEKYKLDVLQQIDNEINNLSNEIKNLKISLDETE 322

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL-TYIRAKVTPKQIQHVK 343
           K  E   I +   G + Y+    S         + +IV        +   +   +   ++
Sbjct: 323 KLIESCNIRAEKDGYVEYSAELVSGAVINGGAEIGRIVGSQAKGFKVIGYIPNTKGSGIE 382

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           +G +  V+      +     +  + K+   I     N Q   +YEV +++ ++      I
Sbjct: 383 RGQSVKVKLAGTDGLN--VVEGQVVKVSRDIKVVTQNGQG--FYEVEVEVKNV---PTGI 435

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIH 428
            L+ G   E+    +   + + ++ 
Sbjct: 436 NLKAGQACEMSIVVEQKRVIEWVLE 460


>gi|170751256|ref|YP_001757516.1| secretion protein HlyD family protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170657778|gb|ACB26833.1| secretion protein HlyD family protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 461

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/429 (12%), Positives = 140/429 (32%), Gaps = 54/429 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P  ++ + L  ++ +     ++        + + G +  +  ++ + SP +G +    V 
Sbjct: 50  PLPVRIVALACVVMVAAFGLYAWQGTYTRRIHAVGLLAPDIGLISLASPVAGRVGSTGVR 109

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +G  L T +                            LD ++      E+    
Sbjct: 110 EGDKVARGQLLYTID----------------------------LDAVSASGPTQERVIAE 141

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            E Q      +      +     ++   R       ++ ++      L  +  L   L+ 
Sbjct: 142 LERQ------RQSVERQRAARADLAGTERQ--ALREQVANLSEQSAQLAKQIDLQDKLVP 193

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +  +  + +   +      D   Q  +  +++ +L     + +     I+    +   
Sbjct: 194 PLRARVEELADAVARGYARAADFQSQNYLYMQASAQL----AQFQQSRLQIDGKLADTRS 249

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + A Y   ++RDL    RT A ++++     + R    + +P AGT+   ++        
Sbjct: 250 QLAAYDDRLARDLADLDRTAA-QLAQQKAESEARRAIEVRAPEAGTLTSIRA-QVGQTVA 307

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-- 371
               L+ ++P +        V    I   + G    +R+  +   R    + ++ ++   
Sbjct: 308 AGATLLTLLPSAGRLQANLFVDSSAIGFAEAGAPVMLRYAAFPFQRFGLHRGVVTEVTRA 367

Query: 372 PIISQQDNN--------LQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
           P+ S    +         +  + Y ++++              L  G   E     +  +
Sbjct: 368 PLGSDDAPDFARRAAARGEGTDLYRIVVRPDSDTVLAYGERRSLEAGMRVEADIALEKRS 427

Query: 422 LAQEIIHPI 430
           L + ++ P+
Sbjct: 428 LYRWLLDPV 436


>gi|42779249|ref|NP_976496.1| hypothetical protein BCE_0168 [Bacillus cereus ATCC 10987]
 gi|42735164|gb|AAS39104.1| hypothetical protein BCE_0168 [Bacillus cereus ATCC 10987]
          Length = 437

 Score =  123 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 60/435 (13%), Positives = 153/435 (35%), Gaps = 36/435 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+R  P  +  + +  ++ +   + W+ +  I+I    +  I  + +V   ++   G+I 
Sbjct: 17  LERKPPRFIAGLIVFLLMSLFVFLIWAYVSKIDIVSKGTAMIQGKSDVSVSRTQIVGVID 76

Query: 69  KFQVENGSQILQGTPLLTFED---IETTDLIDLKKVSIKNLRCHIDTEKSALD-----FL 120
              V+ G ++ +G  L+  ++    +    ++     ++  +  ++  K ++      FL
Sbjct: 77  TVAVKPGDEVKKGNILIQLKNQELTDKQSQMNQIVEHLEKQKGMLEQLKESIQSHKSSFL 136

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           ++    + + +++ +++      +  +    + N  ISS    +   L          +D
Sbjct: 137 DDVDKKIREEYQAYDQRYQSIQNEKDNEIKTIENSKISSEQDEVLQGLIAENENIQREID 196

Query: 181 L-------ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +       EN     + ++   + +L   KN  EK    + +  + ER     T E    
Sbjct: 197 IIEKQKTKENILEEQKQVIDDKKGNLESQKNSVEKRIQQRKETLEHERTKVDVTKE---- 252

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +Q      + +  +E+ +     ++ + ++L         +  +L  L    E   I 
Sbjct: 253 -GKQVQKKDALKQYKEESIISVNQRIQSLEQEL-------FIKKQELDGLRHQNETTIIK 304

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +   G + +       +     Q ++ I+P  +   +R  +  ++I+ +KKG        
Sbjct: 305 AEKDGIVQFPAILQQGDLINPGQEIVSIIPKEEQKKVRILLPAQEIKGIKKGDKVQ---Y 361

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            +   +  K    I  +    +   N        E  +   DL       EL  G     
Sbjct: 362 SFKLQKTDKQMGQITYVSAYPTFDKNTKGYMYELEATIDTKDLQ------ELHIGMVGRA 415

Query: 414 LFTAKNTTLAQEIIH 428
                   + + I+ 
Sbjct: 416 SVITGEEPVWKFILR 430


>gi|260779279|ref|ZP_05888171.1| secretion protein HlyD [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605443|gb|EEX31738.1| secretion protein HlyD [Vibrio coralliilyticus ATCC BAA-450]
          Length = 428

 Score =  123 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 64/428 (14%), Positives = 140/428 (32%), Gaps = 66/428 (15%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +  ++ II  + ++     +     +G +     +V+I+S   G  +   V  G ++L G
Sbjct: 41  VFVLLTIIFFVVFAEYTRRDTL---NGVVSPTGGIVKIQSNDEGYAENVFVTEGQKVLAG 97

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L   +     +                                ++K   +  E  +  
Sbjct: 98  EALYEIKTERYDEF----------------------------GQGVKKRIVTTIENQITL 129

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           L +  +   +   +    +   L  +L+   SI    +DL  +   L   L   Q+    
Sbjct: 130 LNERRNKEVEKSQHQREVIEDDL-ARLSEEASILKVVVDLSEQELSLAQSLVDKQQV--- 185

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH---INELYDEANLEFANY 258
              L  K  +S  +L +Q   +     +++      + ++R    + E  D   LE    
Sbjct: 186 ---LANKQFISSIELQKQRLELITLEAKVQTQRLSLQRLVREKAKLEESKDTLQLELDIA 242

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L+EI R L++        +++  I    +    ++SPI G +         +   + QPL
Sbjct: 243 LQEIDRQLQK--------VTQNKIEYFYQTDTQVVSPIDGVVASIFV-KEGHSVNKGQPL 293

Query: 319 MKIVPH-SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP----- 372
           + ++P       +      + I  +++G    +RF  +   +    + +I  I       
Sbjct: 294 LVVIPEGEDPVVVELYAPSRSIGFIQEGQDVRLRFDAFPYEKFGVQQGVIASISKSAVSA 353

Query: 373 --------IISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTL 422
                   I SQ    L     Y+V +K+     +    E     G             +
Sbjct: 354 EMLPNSPLIQSQLSRTLGGVGLYQVRVKLDKPTITVYGEEQVFVPGMTLTADIELDTRKV 413

Query: 423 AQEIIHPI 430
            + ++ P+
Sbjct: 414 YEWLLEPL 421


>gi|283787662|ref|YP_003367527.1| ABC transporter membrane protein [Citrobacter rodentium ICC168]
 gi|282951116|emb|CBG90804.1| putative ABC transporter membrane protein [Citrobacter rodentium
           ICC168]
          Length = 406

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 67/421 (15%), Positives = 141/421 (33%), Gaps = 50/421 (11%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + + + S+   I ++ +            +G +  +  +V IKS  SG +    +  G  
Sbjct: 25  RVIIICSLFIFICVLLFMSFAEYTQKRDVNGIVYPDKGIVNIKSKQSGTLSALYINGGDY 84

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           I  G  LL  +   +T                                     F + EE 
Sbjct: 85  INTGEKLLAIDASSST-----------------------------------HYFRNNEEN 109

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             + L K     S      I ++    K+   ++     +   + ++  LL A + S Q 
Sbjct: 110 YREMLSKLRGISSSETQANIKTLDAKKKLTEEQIAQTRNSIAIMTSQIRLLDAAIHSQQV 169

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
               +++ ++K  VS  + N  E  +    ++ +   +E  +    I  L  E +     
Sbjct: 170 TFNRIQDAYKKKYVSDIEKNNAEMQLVDKKMQRQSLNNEILSREGQIITLKKELDDTIDR 229

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                    E  + +    M    I   T  +  + +P+AG I      +   +      
Sbjct: 230 IKN---IQNEDKKESLQSLMKMYGIASDT--ESVLRAPVAGKIAEIVERT-GRFVNAGDT 283

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++ ++P   +  I + ++P+ I  +KKG    +++  Y   R      II  I  +  Q 
Sbjct: 284 ILTVIPQGSVNQIVSFISPELIGEIKKGTRVALKYDSYPYQRFGVEYGIIIDISRVPLQP 343

Query: 378 DNNLQ------TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           ++             + V++KIT+       I +  G   +V    +  ++ + I     
Sbjct: 344 EDIYTNFGLKLENSCFRVVIKITE---RKEKITVIPGMSLKVEIPTRKASIIKWIFPFFR 400

Query: 432 D 432
           D
Sbjct: 401 D 401


>gi|254248584|ref|ZP_04941904.1| Membrane fusion protein [Burkholderia cenocepacia PC184]
 gi|124875085|gb|EAY65075.1| Membrane fusion protein [Burkholderia cenocepacia PC184]
          Length = 431

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/439 (11%), Positives = 146/439 (33%), Gaps = 55/439 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVS--SSGEILNEDNVVEIKSPFSGIIKK 69
           + P S++    LS+      +T   L+ +  + +   SG +     ++ + +P    ++ 
Sbjct: 32  DVPVSMRFFCYLSLAMFAMFVT--ALVELSYANTESVSGMLTPRSGLIGVGAPPGWAVRD 89

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V     +  G  LL    +        +  +++ +R  +D ++               
Sbjct: 90  IYVGKDQHVKAGQRLL---AVTRDTSFVSQANNVQGMRAALDRQR--------------- 131

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                               ++  +        S++    ++ +   +R  ++ +    +
Sbjct: 132 -----------------VEVTQQIDAARLEYRSSVQQINQQIAAQGESRGLIDRQIQDQK 174

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            ++  + +    +K L ++  V+    NQ      ++    ++ +  +  + ++  +L  
Sbjct: 175 RIVDEYGERRARVKQLLDEQVVTLEQYNQVNTQYLQAGQAYQDLLLRRAELAKNAMKLRG 234

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           + +   + Y    + +L+  Q     +   +         + + +P  G IV        
Sbjct: 235 DLDTMQSKYDG-ANAELKIKQEELNAKEYNI----DENVNQVLYAPADGQIVRLDVV-QG 288

Query: 310 NYA-QQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                    +++I+P           +   +   VKKG    V +  Y   +   ++  +
Sbjct: 289 GVIDPPGTRVVEILPAKADGLIAEVYIPSSKAGFVKKGQEVKVAYASYPVEKFGTYRGKV 348

Query: 368 EKIDPIISQQ------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
             I P+           +    Q Y++  +++ D   +F    + LR G   +     + 
Sbjct: 349 LSISPVAFSAKELNLPGDAAAPQTYFKTWVELADRTPSFDGRPLSLRAGMMLKADIVLER 408

Query: 420 TTLAQEIIHPITDNWPKIF 438
            +L + +  P+     ++F
Sbjct: 409 RSLLEWLFEPLYRIRQRLF 427


>gi|125717930|ref|YP_001035063.1| multidrug resistance efflux pump/hemolysin secretion transmembrane
           protein [Streptococcus sanguinis SK36]
 gi|125497847|gb|ABN44513.1| Multidrug resistance efflux pump/hemolysin secretion transmembrane
           protein, putative [Streptococcus sanguinis SK36]
          Length = 402

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 88/291 (30%), Gaps = 7/291 (2%)

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR-ALLSSHQKDLTMMKN 204
                +      + + +S+ +K           L+L++  +      L +   ++     
Sbjct: 112 PEERVQSVASLTNGIVKSMNVKEGDQVEKGTTILELDDAVTKQNVGQLENSLTEINASIA 171

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           + +K    +N   Q       +   ++  I E     + +++   +ANL  A Y   +++
Sbjct: 172 VIQKYQADKNISIQLSDYDSLAQNAVQSLISENNLYRQQLSKA--DANLVIAQYETSLAQ 229

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            +           + L       E   I SP  G I                P+  I+P 
Sbjct: 230 KMATLTENKRKTETDLAQQHYILEHLAIKSPSTGQIASLSVSYIGQNVSSENPIATILPS 289

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                  A+V+ K    ++K   A V+   Y           +  I P   Q        
Sbjct: 290 KSELIFEAQVSDKDRADIQKDMEAVVKLQAYPYSDYGTIPGKVTYISPTAFQVKGKGMV- 348

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
             Y V + +         + L +G    +     + ++    + PI D   
Sbjct: 349 --YIVRISVDKKKLH-KGVSLISGLSGTIEIKTSSRSVLDYFLDPIRDGLN 396



 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 4/162 (2%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+ L  I++ V  +GEI+ E+ V  + S  +GI+K   V+ G Q+ +GT +L  +D  T 
Sbjct: 94  WASLSRIDVVVVGTGEIVPEERVQSVASLTNGIVKSMNVKEGDQVEKGTTILELDDAVTK 153

Query: 94  DLIDLKKVSIKNLRCHIDTEK--SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             +   + S+  +   I   +   A   ++ +    +   ++  + L+     Y    SK
Sbjct: 154 QNVGQLENSLTEINASIAVIQKYQADKNISIQLSDYDSLAQNAVQSLISENNLYRQQLSK 213

Query: 152 V-FNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRAL 191
              N  I+    SL  K+  +  +      DL  +  +L  L
Sbjct: 214 ADANLVIAQYETSLAQKMATLTENKRKTETDLAQQHYILEHL 255


>gi|83858314|ref|ZP_00951836.1| HlyD family secretion protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853137|gb|EAP90989.1| HlyD family secretion protein [Oceanicaulis alexandrii HTCC2633]
          Length = 414

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 53/418 (12%), Positives = 124/418 (29%), Gaps = 49/418 (11%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
             ++ + I  ++ ++            G +  +  V+   +   G I+   V+ G  +  
Sbjct: 33  IAIASLTIASVVIFASTASYSRKEMVQGWLTPDQGVIRALALQGGQIEALLVQEGDIVSA 92

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G PL                         +DT            D L+ A  +R   ++ 
Sbjct: 93  GAPLARL---------------------RLDT------------DTLDGASGAR---VMS 116

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            L        +  N  I+ + +        +      R  L  + SL R  ++   + + 
Sbjct: 117 ALQAQTDAAERSANAEIARMEQDEARLTGALHGFMTERAGLSRQISLQRERITLADEQIE 176

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               L E+  +S  +L+ +  +     L  R+ +   +     I+    E      +   
Sbjct: 177 RAVILSERGYMSGRELDDRRLM----ALAARQELAALERNDATISRQILEVRAALQSLPL 232

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           +I  +  +     A    ++T  +  R +  I +P    +               + +  
Sbjct: 233 QIEAERARAASVRAALDERITT-QSARNEGVITAPADVRVAALPVR-QGQTLAPGETVAV 290

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           ++P          +  +    +  G    + +  Y   R    KA I  I   +   +  
Sbjct: 291 LMPEDGELVAELYLPTRAAGFIHVGQDVRLMYQAYPHQRFGSGKATITAISRTVLAPNEA 350

Query: 381 LQT-----QEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
                   +  + V  +L+  ++      I L+ G            +L + +  P+ 
Sbjct: 351 AIPGLNLQEPVFRVEAMLERAEVDAYGETIPLQPGLLLNADIILDRRSLIEWLFDPLF 408


>gi|239993057|ref|ZP_04713581.1| membrane-fusion protein [Alteromonas macleodii ATCC 27126]
          Length = 417

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 71/430 (16%), Positives = 138/430 (32%), Gaps = 50/430 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV-VEIKSPFSGII 67
           L    P       LL +  ++ +I +          S SG +     V         G +
Sbjct: 23  LMTPKPVYSAIAGLLVVW-VLAVIIYLNTGSYARKASVSGWLEPSHGVFKLYADARRGKV 81

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V  G  + +G PL+      ++D     KVS   L   ++ ++             
Sbjct: 82  LDVLVSEGQLVSKGAPLIKIN--YSSDDASGNKVS-TQLLAELEAKQH------------ 126

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                 R  Q +  L   H    +     +S   R+L                L+    L
Sbjct: 127 ------RTRQSIQRLDVLHRAQRQGLEEQLSQAKRALTA--------------LDAIVEL 166

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +   +   K     + L  +  +SQ D          +  +L     +Q +   +I  L
Sbjct: 167 SQTQWALALKQWEKAQTLLNQGHISQADYENHTLQRLTAEQQLTLAKKDQNDEKANIAAL 226

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
           + E     A   ++ + ++   + T +D   ++   +   E+  I +P  G I   Q  +
Sbjct: 227 HHE----LATLPQQQANEMANVENTLSDLTQQIVSHKSNAEET-IYAPHNGVISGLQVKA 281

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                  S+PL+ ++P +     R  V  +    ++KG    +R+  +   +       I
Sbjct: 282 -GYTIDSSRPLLTLLPKNADIQARIAVPVRSAGFLRKGQALHIRYDAFPYQKFGVQSGEI 340

Query: 368 EKIDPIIS-----QQDNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             I P +             ++  Y V   L   ++    NNI L+ G            
Sbjct: 341 VNISPSLVLPGELTDIPISISEPAYLVTATLNTKEILAYGNNISLKAGMTFSADVDLSQR 400

Query: 421 TLAQEIIHPI 430
           TL + ++ P+
Sbjct: 401 TLMEWLMEPL 410


>gi|254501344|ref|ZP_05113495.1| hypothetical protein SADFL11_1381 [Labrenzia alexandrii DFL-11]
 gi|222437415|gb|EEE44094.1| hypothetical protein SADFL11_1381 [Labrenzia alexandrii DFL-11]
          Length = 412

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 46/420 (10%), Positives = 138/420 (32%), Gaps = 50/420 (11%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
            ++ +   + +     +E      G ++  + ++ ++   SG I  F  + G  + +G  
Sbjct: 37  ILVAVGLFLGFGNFARLETV---RGAVIPSNGMIHVRPASSGYITDFAAQEGEYVREGQE 93

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L      +       +          +   +  +  L+++   + +    + + L     
Sbjct: 94  LGRLVVADAATDDGSETA------ARLAAHERQISNLDDEIIKMNQLNRVKLDDL----- 142

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           K  ++ +++    I +     +  +  ++  Y    DL  +  +           L   K
Sbjct: 143 KVRTSDAQIALENIKNQIAIQETLVVELKGSYQRASDLSARGHVSGETRDVRNIRLLTGK 202

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
              ++    QNDL  + R   ++  EL   I +    +  +    ++   E   +  +  
Sbjct: 203 QDLQRLLSDQNDLEAELRKFGRARSEL---IAQNALDVARLEAQKEKLLAEKDIFKSQKV 259

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
                                       I++PI+G +    + S     +   PL  I+P
Sbjct: 260 FK--------------------------IVAPISGYVTTVLA-SRGAAVRSEHPLFSILP 292

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN--- 380
            + +  +   V  + I  V++G    ++F  +   R       +  +   +  +++    
Sbjct: 293 ENSVLQVELYVPSRAIGFVEEGLAVRIQFDSFPFERFGAQAGTVRLVTRSVLSKNDPSVL 352

Query: 381 -LQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
               +  Y V + +  ++++    +  ++ G         ++ ++   ++ P+     + 
Sbjct: 353 VQTGEPIYRVNVDLAASEVSAYGRSYAIQPGMLLSANIILEDRSILSWLLEPMIAVARRS 412


>gi|255530472|ref|YP_003090844.1| hypothetical protein Phep_0559 [Pedobacter heparinus DSM 2366]
 gi|255343456|gb|ACU02782.1| hypothetical protein Phep_0559 [Pedobacter heparinus DSM 2366]
          Length = 429

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 69/428 (16%), Positives = 151/428 (35%), Gaps = 23/428 (5%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIK 60
           H    +++    PA L R  L  I  ++ L I+ S L+     V +  +I + +    + 
Sbjct: 12  HSEEMQDIISKPPAWLLRWGLSVIFAVLILMISLSALIKYPDIVKTQLKITSANAPKSVI 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S  SG + K  V+    ++   PL   E   + + +      +KNL+ ++      L  L
Sbjct: 72  SKISGQLVKVTVQENQAVITDQPLAYIESTASHEQVLQLLDELKNLQANLSEGMIPLKLL 131

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               +V     ++  +        Y S+ +  F        +        + SI   +  
Sbjct: 132 ATPKNVFLGELQNAYQSFYQSFLMYQSSIANGFYLKKKVFLQ------KDLLSILDQKEQ 185

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L  +  L        +K+  M + LFE+   +  +L ++E         L++      + 
Sbjct: 186 LLVQQKLQEKDYELGKKEFEMHQKLFEQKVEAPMELKREESKFIAKRYPLQQTESALLSN 245

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              I    ++  +E  N + E      +  +      + ++ +E  +++  + +P  G +
Sbjct: 246 -SIIYSAKEKEIMELENLISE------EKLKFIQALNNFISNIEDWKKKYVLTAPQPGKV 298

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            +        +    Q ++ I P S   +    +   ++  V K     ++   Y     
Sbjct: 299 AFLGIVQEKEFLNAGQEVLYINPGSTDFFGEIHIPQYKMGKVYKDQEVLIKLKSYPFEEY 358

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
              +  I+ I  I             +   + I++   S    NI L+NG  A+     +
Sbjct: 359 GIIRGNIQSIADI-------PYKDSVFVSRVSISNKGMSGLKRNIRLKNGMIADAEIITE 411

Query: 419 NTTLAQEI 426
           + TL + +
Sbjct: 412 DATLLKRL 419


>gi|258544734|ref|ZP_05704968.1| toxin secretion ABC superfamily ATP binding cassette transporter,
           membrane fusion protein [Cardiobacterium hominis ATCC
           15826]
 gi|258520005|gb|EEV88864.1| toxin secretion ABC superfamily ATP binding cassette transporter,
           membrane fusion protein [Cardiobacterium hominis ATCC
           15826]
          Length = 420

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 136/398 (34%), Gaps = 53/398 (13%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +  GE++    V+++  P SG ++   V++G+++ +G  LL       T   D +   +
Sbjct: 55  ATVYGELVPVQGVIKVYPPQSGRVESIAVQHGAKVRKGAVLLRINSALDTAGGDTQARVL 114

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           + LR   +T    L                                         +  + 
Sbjct: 115 QALRVQRETLSDNL-------------------------------------ARNRAAQKE 137

Query: 164 LKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
              ++   R     + + L  +  LL +  +   K+    + L +++ V++     Q + 
Sbjct: 138 YVAQMAARRDTLAAQAEMLAAQEKLLASRRALAAKNEARYQRLMKQDYVTREAYEGQMQE 197

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                ++L++   E+ +  + +  L +E   +  ++ +E   +L + Q     ++++   
Sbjct: 198 RLSLDVQLQQLKRERNSAEQQLLALANEETQQNDSFAREA-HELSRQQAQVEAQIAE--- 253

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
             ++R++  + +P  G +           AQ  QPL+ +VP               +  V
Sbjct: 254 -TESRQEIVLRAPQDGIVSALLV-EVGQQAQAGQPLLALVPQEARYEANLYALSHNMGFV 311

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKID-------PIISQQDNNLQTQEYYEVILKITD 395
             G T  +R+  Y   +  ++ A +  +         +       LQ Q  Y +  ++  
Sbjct: 312 HPGQTVYLRYGAYPYQKFGQYAAQVRDVAKTAAPLNELTDTAFPALQNQSAYRIRAELAQ 371

Query: 396 LAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
                      L  G   E         + + ++ P+ 
Sbjct: 372 DFILAYGEKQPLMAGMQFEADIVQDRRRIYEWMVEPLF 409


>gi|229120719|ref|ZP_04249962.1| hypothetical protein bcere0016_10280 [Bacillus cereus 95/8201]
 gi|228662724|gb|EEL18321.1| hypothetical protein bcere0016_10280 [Bacillus cereus 95/8201]
          Length = 419

 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 58/388 (14%), Positives = 143/388 (36%), Gaps = 10/388 (2%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            V + G +   +    + S   G+I +   ++G  + +G  +L           +  K  
Sbjct: 27  VVKAQGVVAVNETS-YVASKGYGVINEIYAKSGDYVKKGDRILVISSGNEGVQANAIKEQ 85

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I++L   I+        L  K + L++    +E +    +  Y  +  +  NY ++S+  
Sbjct: 86  IRDLEETIEVMDRYKQSLMKKENTLKQ--NGKEMEYYSKINYYLDSVKR-ENYEVNSIKD 142

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE-- 220
            +  K+  +  +     +L+++   L  L    +K+  +  +      +S N+  + E  
Sbjct: 143 QMNEKVKEVDKLDKEINELQSQLEQLN-LNKEDEKNYNLELSDNNSGTISNNEGKKSEIK 201

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             +     E +  ++E K + + +     ++       L E+ +   Q      +  +  
Sbjct: 202 GYLDAKKTEKKGLLNEVKQLEQQVKSPSSKSTELLNQLLSELGQSRNQASSKIIELTANF 261

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              ++      +++  +G + Y    +     QQ+Q L +I    +  YI A +  +   
Sbjct: 262 GASKEQDSIHNLIASQSGVLHYPNPLAKGMSIQQNQILGEIASEEEDFYIDAYIPAQDRS 321

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            VK+G    V      + R       ++ I+P   + +++ +   YY   +K+ + +   
Sbjct: 322 RVKEGNPVEVSIIGVNNHRFGSLSGSVKFIEPGTLKDESSKEKMIYYRTNVKLGETSLKS 381

Query: 401 NN---IELRNGFPAEVLFTAKNTTLAQE 425
            +   +EL    P E        +  + 
Sbjct: 382 KSGEVVELMRSMPVEARIVYAEESYLEW 409


>gi|86141338|ref|ZP_01059884.1| hypothetical protein MED217_04952 [Leeuwenhoekiella blandensis
           MED217]
 gi|85831897|gb|EAQ50352.1| hypothetical protein MED217_04952 [Leeuwenhoekiella blandensis
           MED217]
          Length = 452

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 61/418 (14%), Positives = 135/418 (32%), Gaps = 50/418 (11%)

Query: 9   LKRNHPASLKRM--TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           L++ H A   R       I+ I+  + W     I      +  +  E     I+SP  G 
Sbjct: 25  LEKKHYAYFNRFLKVFSIILIIVLFLPW--TQTISGIGYVT-TLTPEQRPQTIQSPIPGR 81

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETT----DLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           I+K+ V  G  + +G  +L   +++      +L++     ++     +++ ++ ++ L N
Sbjct: 82  IEKWYVREGDFVEKGDTILFITEVKNEYFDPNLVERTDQQVRAKASSVESYRNKVNALGN 141

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           + + L            + + K     +K     +     S+             + +L 
Sbjct: 142 QIEALRN----------ERVLKLQQAENKRIQAELKIKSDSID--------FEATKTNLR 183

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                    L   Q+ L  + ++ EK    +  L + +  +     +L  + +E  N   
Sbjct: 184 IAERQYERTLGLQQEGLKAVTDVEEK----RLKLQEAQAKIISQENKLLASRNELLNAQI 239

Query: 243 HINELYDEANLEFANYLKEISRDLE---QNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            +N L      + +    + +  L      +   +   +  T  E       + +P +G 
Sbjct: 240 ELNRLEATYADKISKAQSDQATALSTQLDTEAAVSKLENTRTNYEIRNALYYVRAPQSGY 299

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR-------- 351
           I            ++ Q L+ I+P      +   V P  +  +  G    ++        
Sbjct: 300 INKAIIGGIGETFKEGQQLVSIMPSDFDIAVETYVKPIDLPLIHNGEKVRIQFDGWPSIV 359

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNG 408
           F  +       F   +  I+  IS           Y V+L    D       + +  G
Sbjct: 360 FSGWPYNSFGTFGGKVVAIERFISPNGK-------YRVLLAPDPDEQPWPEALRIGAG 410


>gi|323963808|gb|EGB59306.1| hemolysin D [Escherichia coli M863]
          Length = 191

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 3/186 (1%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            +QE    ++  E    + +   + + I  + +E  LE   +  EI     ++       
Sbjct: 1   MEQENKYIQAKNEHAVWLAQVSQLEKEIELVREELALETNIFRSEIIEKHRKSTDNIVLL 60

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
             +L    + +    I +P++GT+      +       ++ LM IVP + +  + A V  
Sbjct: 61  EHELEKNRQRKASSFIKAPVSGTVQELNIHTEGGVVTTAETLMMIVPDNDILEVTASVLN 120

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           K I  ++ G    ++   Y   R       ++ I        +       + VI+ I   
Sbjct: 121 KDIGFIQPGQEVVIKVDAYPYTRYGYLTGKVKNITADPVSVPDTGLV---FNVIISIDRN 177

Query: 397 AFSDNN 402
                 
Sbjct: 178 DIQGER 183


>gi|186682213|ref|YP_001865409.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186464665|gb|ACC80466.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 480

 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 79/469 (16%), Positives = 159/469 (33%), Gaps = 71/469 (15%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     +T +  + ++GL  WS+   I I+V+  G ++    VV  +SP SG I    V 
Sbjct: 33  PKKWIPLTAMGSLIVVGL-VWSVFGRIPITVAGQGVVVFPSKVVGFQSPSSGQILMLFVR 91

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +G  L T +  E  D + L +V +      +  +    + L  +  VL+K    
Sbjct: 92  TGDEVKKGQVLATIDQTELQDKLKLARVKL----AQLQEQDQNANSLQLQRTVLDKGAIG 147

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           ++ Q L    K   + + +                  + SI   R +L+ +    R L+ 
Sbjct: 148 QQRQALLQTLKTTQSLTPILRS-------------KGLESIRQERQNLQEQLQTTRDLMP 194

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + ++   + + L E+ AVS + + Q ++    S    +  I+E ++ L+ +N    +A  
Sbjct: 195 TFKERFDIRQKLREEGAVSSDTVLQAQQEFLNS----KTKINEIESQLKQLNVKEADAER 250

Query: 254 EF---ANYLKEISRDLE--------QNQRTFADEMSKLTILEKTRE-----------QKT 291
           EF    N  KE+   L         Q ++  A   ++   ++ T+               
Sbjct: 251 EFLANINSTKELQAQLAVLDSKFAGQAEQDLAISTNRRKEIQDTQRAIAELKLEIKANSQ 310

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTAT 349
           + S   G I+   +       ++   +  I            A     + + ++KG    
Sbjct: 311 VTSNFNGRILELSAV-PGQTLEKGARIGTIEARDSGNKLVGVAFFPVSEGKKIQKGMELQ 369

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQD-----------------NNLQTQEYYEVILK 392
           V        R       +  I      ++                    Q Q + E+   
Sbjct: 370 VTPSTVKRERFGGIIGKVTSISAFPVSKESASSVVGGLEVLQGLTTEGAQIQVFAELEPD 429

Query: 393 ITDL------AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
            +        +    N ++  G    V       +    +  PI  +W 
Sbjct: 430 PSTKSHFRWSSSKGPNSQITPGTTTSVRVKVDEQSPISFVF-PILRSWS 477


>gi|192361888|ref|YP_001980799.1| putative toxin secretion, membrane fusion protein [Cellvibrio
           japonicus Ueda107]
 gi|190688053|gb|ACE85731.1| putative toxin secretion, membrane fusion protein [Cellvibrio
           japonicus Ueda107]
          Length = 438

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/395 (13%), Positives = 128/395 (32%), Gaps = 50/395 (12%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +  G +     VV +    SG +KK  V+ G ++  G PL+              +  + 
Sbjct: 78  TVVGWLEPPTGVVRLYPEASGQVKKILVKEGDKVQAGQPLIIINGDRILADGGNLESRL- 136

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                                            L ++  +      ++     +   R  
Sbjct: 137 ---------------------------------LEEYESQRRLLTEQIERADRTQQDRE- 162

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                ++ SI  N   ++ + + L A     +  +   +   EK  +S+ + +Q      
Sbjct: 163 NSLRRQIESIKHNLSLMDEQLATLDARHILIKNQIERYRPKIEKGHISRLEYDQVLSQEL 222

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               + +  + E  N    +++ + +  L      +E +  L+Q Q   ++   ++  L+
Sbjct: 223 SVRSDKQGLLREISNQKDLLSQRHTDLRL----LAQEAANSLDQLQARMSELAQQIAQLQ 278

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHV 342
             R    I +  AG +   Q+     +   +   PL+ +   +        V  +    +
Sbjct: 279 GQRAH-IITATRAGIVNNLQAR-EGQFVSSTNPVPLLTLADSASPLVAHLLVPVRAAGFI 336

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQ---DNNLQTQEYYEVILKITDLA 397
             G    +R+  +   +   ++  IE +   P++  +         +  Y V  ++ +  
Sbjct: 337 ASGQRLDIRYDAFPYQKFGLYQGEIESVAKTPLLPGELLNTPVTLQEPVYRVEARLYEQG 396

Query: 398 FS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +    +I LR+G             L Q ++ PI
Sbjct: 397 VNAYGQSIPLRSGMTLTADVELAERRLWQWLLEPI 431


>gi|167851528|ref|ZP_02477036.1| ABC antibiotic efflux pump, membrane fusion protein, HlyD subfamily
           [Burkholderia pseudomallei B7210]
          Length = 383

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/420 (13%), Positives = 132/420 (31%), Gaps = 56/420 (13%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           + +  W            +G ++ +  ++ + +   G I + QV  G  +  G PLL   
Sbjct: 3   VSIAVWLFAGKYTRREHVAGSLVPQAGLINVSAQALGTITRIQVSEGDVVHAGDPLLHLS 62

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
              ++  +     +I   +  +  E+   D +N +     +A + R ++ +         
Sbjct: 63  GERSSASMGETASNISA-QLRLQMERLRADLINTQQLAERQASDLRMQRQMAQHQIQQLD 121

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              V     +    S+                                  L   +++  +
Sbjct: 122 QQIVVEQHEADDLSSM----------------------------------LKRFESMAGQ 147

Query: 209 NAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             VS   + QQ     ++  +   L     E +  LR + +   +  L  A  L E+ R 
Sbjct: 148 GFVSGLQVQQQRSQKVETEQQVKTLGRQRVEAEQQLRGVEDQLIQLPLTTATKLDELHRQ 207

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           + Q+++  A   ++         +  + +P  G I      +        Q L+ + P  
Sbjct: 208 IAQSRQALAQNEAE--------RETVVRAPEDGVISTVLVKT-GQTVTTGQALLTMTPKG 258

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-------IISQQD 378
            L   +  V    I  V++G    + +  +   +    +  + +I         I +   
Sbjct: 259 SLLQAQLLVPSSAIGFVREGTDVILHYQAFPYQKFGIQRGRVVRISRNALTPAEITTLLG 318

Query: 379 NNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
               T+  Y V +++   ++        L+ G   +         + + I+ P+     +
Sbjct: 319 QQAPTEALYRVDVRLFRQEIEAYGRMESLKPGMAVDADLLLDRRRMIEWILEPLYGMAHR 378


>gi|315182046|gb|ADT88959.1| secretion protein HlyD family protein [Vibrio furnissii NCTC 11218]
          Length = 428

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 65/427 (15%), Positives = 144/427 (33%), Gaps = 66/427 (15%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
             ++ II  + ++     +     +G +     ++++++   G   K  V  G ++L G 
Sbjct: 42  FVLVTIIFFVVFAEYTRRDTL---NGVVSPTGGIIKVQANDEGYAGKVFVTEGQKVLAGE 98

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
           PL    DI+T    +  +   K +   ID++                         +  L
Sbjct: 99  PLY---DIQTERYDEFGRGVKKRILTTIDSQ-------------------------ISLL 130

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            K      + + + +  +   L ++L+    I     DL  +   L   L   Q+     
Sbjct: 131 NKRRHKEVEKYQHQLEVIDDDL-IRLSEEEDILEVVFDLSKQELSLAQSLVDKQQV---- 185

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH---INELYDEANLEFANYL 259
             L  K  +S  +L +Q   +     +++      + ++R    + E  +   LE    L
Sbjct: 186 --LVNKQFISSIELQRQRLELITLEAKVQTQRLSLQRLVREKAKLKETKETLQLELDIAL 243

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +EI R L+Q        +++  I    +    ++SPI G +         +   + QPL+
Sbjct: 244 QEIDRQLQQ--------IAQNKIEYFYQTDTQVVSPINGVVASIFV-KEGHSVNKGQPLL 294

Query: 320 KIVPH-SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP------ 372
            ++P   +   +      + I  +++G    +RF  +   +    + +I  I        
Sbjct: 295 VVIPEGEEPAIVELYAPSRSIGFIQEGQGVRLRFDAFPYEKFGIQQGVIASISKSAVSAE 354

Query: 373 -------IISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLA 423
                  I  Q          Y+V +K+     +    E     G             + 
Sbjct: 355 MLPNSPLIQGQLSRTYGGVGLYQVRVKLEKPTITVYGEEQMFVPGMTLTADIELDTRKIF 414

Query: 424 QEIIHPI 430
           + ++ P+
Sbjct: 415 EWLLEPL 421


>gi|126444777|ref|YP_001062811.1| putative secretion protein [Burkholderia pseudomallei 668]
 gi|134282479|ref|ZP_01769183.1| putative secretion protein [Burkholderia pseudomallei 305]
 gi|237509895|ref|ZP_04522610.1| putative secretion protein [Burkholderia pseudomallei MSHR346]
 gi|254183647|ref|ZP_04890239.1| putative secretion protein [Burkholderia pseudomallei 1655]
 gi|126224268|gb|ABN87773.1| putative secretion protein [Burkholderia pseudomallei 668]
 gi|134246036|gb|EBA46126.1| putative secretion protein [Burkholderia pseudomallei 305]
 gi|184214180|gb|EDU11223.1| putative secretion protein [Burkholderia pseudomallei 1655]
 gi|235002100|gb|EEP51524.1| putative secretion protein [Burkholderia pseudomallei MSHR346]
          Length = 431

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/437 (13%), Positives = 150/437 (34%), Gaps = 51/437 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P S++    LSI+     I   + L    + S  G +     ++ + +P    +++  
Sbjct: 32  DVPISMRFFCYLSIMMFAMFIVALVRLTYANTESVMGMLTPRSGLIGVGAPPGWAVREVF 91

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V     +  G  LL+      T  +  +  +++ +R  I  ++  +              
Sbjct: 92  VAKDQHVKAGQKLLSV--TRDTSFVS-QANNVQGMRESIKRQRVEVG------------- 135

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                Q +D     + +  +  N  I++   S  +              ++ +    + +
Sbjct: 136 -----QQIDAAKLEYQSTIQQINQQIAAFDESRGL--------------IDKQIQDQKRI 176

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +S +Q+    +K L  +  V+    NQ      +++   ++ +  + ++ ++  +L  + 
Sbjct: 177 VSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDL 236

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               + Y    + +L+  Q     +   +         + + +P  G IV        + 
Sbjct: 237 ETVQSKYDGS-NAELKIKQEELNSKEYNI----DESVNQVLYAPADGQIVRLDVV-QGSV 290

Query: 312 A-QQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  +++I+P           +   +   VK G    + +  Y   +   ++  +  
Sbjct: 291 IDPPGTRVVEILPAKADGLIAELYIPSSKAGFVKPGQEVKLAYGSYPVEKFGTYRGKLLS 350

Query: 370 IDPIISQQ------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTT 421
           + P+           +N   Q Y++  +++ D   AF    + L+ G         +  T
Sbjct: 351 VSPVAFTAKELNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTLRADIVLEKRT 410

Query: 422 LAQEIIHPITDNWPKIF 438
           L + +  P+     +IF
Sbjct: 411 LLEWLFEPLYRIRQRIF 427


>gi|167565937|ref|ZP_02358853.1| putative secretion protein [Burkholderia oklahomensis EO147]
          Length = 431

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/437 (12%), Positives = 149/437 (34%), Gaps = 51/437 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P S++    LSI      +   + L    + S  G +     ++ + +P    +++  
Sbjct: 32  DVPVSMRFFCYLSIAMFAMFVVALVRLTYANTESVMGMLTPRTGLIGVGAPPGWAVRELY 91

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V     +  G  LL+      T  +  +  +++ +R  I  ++  +D             
Sbjct: 92  VAKDQHVKAGQKLLSV--TRDTSFVS-QANNVQGMRESIKRQRVEVD------------- 135

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                Q +D     + +  +     I+++  S              R  ++ +    + +
Sbjct: 136 -----QQMDAAKLEYQSTIEQIKQQIAALSES--------------RALIDKQIQDQKRI 176

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +S +Q+    +K L  +  V+    NQ      ++    ++ +  + +++++  +L  + 
Sbjct: 177 VSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQAGQAYQDLMLRKADLVKNAMKLRGDL 236

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               + Y    + +L+  Q     +   +         + + +P  G IV        + 
Sbjct: 237 ETVQSKYDGS-NAELKIKQEELNSKEYNI----DESVNQVLYAPADGQIVRLDVV-QGSV 290

Query: 312 A-QQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  +++I+P           +   +   +K G    + +  Y   +   ++  +  
Sbjct: 291 IDPPGTRVVEILPAKADGLIAELYIPSSKAGFIKPGQEVKLAYGSYPVEKFGTYRGKLVS 350

Query: 370 IDPIISQQ------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTT 421
           + P+           +    Q Y++  + + D   AF  + + L+ G         +  +
Sbjct: 351 VSPVAFTAKELNLPADAGSPQTYFKSWVDLADRKPAFEGSPLALKAGMTLRADIVLEKRS 410

Query: 422 LAQEIIHPITDNWPKIF 438
           L + +  P+     ++F
Sbjct: 411 LLEWLFEPLYRIRQRMF 427


>gi|254469634|ref|ZP_05083039.1| HlyD family secretion protein [Pseudovibrio sp. JE062]
 gi|211961469|gb|EEA96664.1| HlyD family secretion protein [Pseudovibrio sp. JE062]
          Length = 120

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 14/131 (10%)

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                    LM +VP      I ++V P  +  ++ G  A VR   +      +  A + 
Sbjct: 2   GGVIAPGDTLMLVVPEDSELVIESRVQPIDVDQLQVGQDAYVRLTAFDQRTTPELSAAVL 61

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            + P +++ +  +  + +Y   LKI +      N                  T+    + 
Sbjct: 62  NVSPDLTRDE--VTGEPFYLARLKILESEMPKLNG------------QTGERTVLSYFVK 107

Query: 429 PITDNWPKIFE 439
           P+ D      +
Sbjct: 108 PLQDQIAHALK 118


>gi|53722306|ref|YP_111291.1| hypothetical protein BPSS1283 [Burkholderia pseudomallei K96243]
 gi|217418466|ref|ZP_03449973.1| putative secretion protein [Burkholderia pseudomallei 576]
 gi|52212720|emb|CAH38752.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|217397770|gb|EEC37785.1| putative secretion protein [Burkholderia pseudomallei 576]
          Length = 431

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 57/437 (13%), Positives = 150/437 (34%), Gaps = 51/437 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P S++    LSI+     I   + L    + S  G +     ++ + +P    +++  
Sbjct: 32  DVPISMRFFCYLSIMMFAMFIVALVRLTYANTESVMGMLTPRSGLIGVGAPPGWAVREVF 91

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V     +  G  LL+      T  +  +  +++ +R  I  ++  +              
Sbjct: 92  VAKDQHVKAGQMLLSV--TRDTSFVS-QANNVQGMRESIKRQRVEVG------------- 135

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                Q +D     + +  +  N  I++   S  +              ++ +    + +
Sbjct: 136 -----QQIDAAKLEYQSTIQQINQQIAAFDESRGL--------------IDKQIQDQKRI 176

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +S +Q+    +K L  +  V+    NQ      +++   ++ +  + ++ ++  +L  + 
Sbjct: 177 VSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDL 236

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               + Y    + +L+  Q     +   +         + + +P  G IV        + 
Sbjct: 237 ETVQSKYDGS-NAELKIKQEELNSKEYNI----DESVNQVLYAPADGQIVRLDVV-QGSV 290

Query: 312 A-QQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  +++I+P           +   +   VK G    + +  Y   +   ++  +  
Sbjct: 291 IDPPGTRVVEILPAKADGLIAELYIPSSKAGFVKPGQEVKLAYGSYPVEKFGTYRGKLLS 350

Query: 370 IDPIISQQ------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTT 421
           + P+           +N   Q Y++  +++ D   AF    + L+ G         +  T
Sbjct: 351 VSPVAFTAKELNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTLRADIVLEKRT 410

Query: 422 LAQEIIHPITDNWPKIF 438
           L + +  P+     +IF
Sbjct: 411 LLEWLFEPLYRIRQRIF 427


>gi|240949938|ref|ZP_04754257.1| hypothetical protein AM305_02152 [Actinobacillus minor NM305]
 gi|240295608|gb|EER46326.1| hypothetical protein AM305_02152 [Actinobacillus minor NM305]
          Length = 417

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 73/398 (18%), Positives = 141/398 (35%), Gaps = 59/398 (14%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           GEI+ +   + I S  SG + +  V    Q+ +G PL   +    T   ++   SI+ LR
Sbjct: 55  GEIVMQSYPIIISSSKSGYVSERYVSLHQQVKKGDPLFKIKLDRITSSGEISSNSIQALR 114

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             I     A+  L N                                  I S+ + +K  
Sbjct: 115 EQIKATDRAILLLKNNK-----------------------------GKTIQSLDKQIKNN 145

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
               +   L   +LE+ +     L++ ++K       L +    + +++N Q    ++  
Sbjct: 146 QKIKQDKILYLSELEDSTQDYAELVNRYEK-------LLKIGYSNNDEVNVQRARYFQQ- 197

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              +  ++E K  +  I         E      +    + +     +D   +L  LE + 
Sbjct: 198 ---KSLVNEIKQDILQIQSNILNLENEIETRKTDFDNQIIRYNIQKSDLNIRLMELE-SV 253

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK---LTYIRAKVTPKQIQHVKK 344
              TI+SP+ G I    + +     ++  PL +I+P  K      +   V    I  +KK
Sbjct: 254 SDLTIISPVDGFIESISA-TLGQIVKEGDPLSQIIPADKGNYQLVL--WVPNSAISFLKK 310

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQ----------QDNNLQTQEYYEVILKIT 394
                +R+  +   +  +F+ +I+ I  + +             +  Q    Y+VI+ I 
Sbjct: 311 NDKVNIRYEAFPFEKFGQFEGVIQSISTLPASLQELAFYNNLPQSAEQNIPLYKVIVDIQ 370

Query: 395 DLAFSDNNIELR--NGFPAEVLFTAKNTTLAQEIIHPI 430
           D     N+  L   +G  AE     +   L + I+ P 
Sbjct: 371 DQYVQYNDTILYFMSGMKAEATLFLEKRKLYEWILFPF 408


>gi|66768718|ref|YP_243480.1| hypothetical protein XC_2410 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|66574050|gb|AAY49460.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 442

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/432 (13%), Positives = 139/432 (32%), Gaps = 50/432 (11%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +LK   P+S++          + L T+ +          SG+I++    V+I+S   G+I
Sbjct: 40  DLKDAFPSSIRIWIGCGCALFLLLATFVLTASYSKREHVSGQIISTHGRVDIRSGTPGLI 99

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               ++  + + +G  L       T                  +  +S  D    +    
Sbjct: 100 LSTTLKPNALVKKGQVLAELSADITD-----------------EAGRSLSDETIKRALTR 142

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +     + Q  DF G+     ++       ++                   ++  K S+
Sbjct: 143 SEELTKEQLQTHDFSGQRERELTRQVEETTGAMQ------------------EVARKISI 184

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L    + +++ L  ++ L  +  VS+      E  +  +  E+++   +Q  +      L
Sbjct: 185 LEKKYAKNKELLKTIEPLLAEKYVSKYTYLTYENALLDAEAEIQDARAQQSTLRNQRAAL 244

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E   E        + ++E+ + T  D++++     K+   +TI SP++GT+    + S
Sbjct: 245 LGEI-TEIKTTASRQASEIEREKSTIEDQVAR----AKSDRLQTITSPLSGTVAAIYA-S 298

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                     +  I P   +      +  + I HV  G    +    +   +    +  I
Sbjct: 299 QGQRIGTDSIIASITPSESVFEAEILIPSRAIGHVNVGTEVLLNIAAFPKAKYGAIQGRI 358

Query: 368 EKIDPIISQQ-------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAK 418
             +    S              T+  Y   + +    +  +        G   +     +
Sbjct: 359 ASLSTQTSPIGELERRYGRQSPTEPVYTAKVALPSQTIGVAQEAKSFLPGMEVDAELILE 418

Query: 419 NTTLAQEIIHPI 430
              + + +  P 
Sbjct: 419 GRKIWEWMFDPF 430


>gi|88808192|ref|ZP_01123703.1| possible transporter component [Synechococcus sp. WH 7805]
 gi|88788231|gb|EAR19387.1| possible transporter component [Synechococcus sp. WH 7805]
          Length = 367

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 109/317 (34%), Gaps = 33/317 (10%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           + +   L      + K    +   ++    +      +V    +  + + L+ +  R++S
Sbjct: 69  RRSTQDLTTPEPGVVKRVLVKSGDVVQQGQELVVLDPRVQTSNVDELQKQLEAEAARLQS 128

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               +  +      L   L   ++ L   K L E+ A SQ  L +++R +  +    R +
Sbjct: 129 ---EQARIRETIRGLETQLEIDRQILEPFKQLAEQGASSQLQLIEKQRQLEAT----RRS 181

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           + E +  L+ I+                      Q+Q   A   + L   +   +  T+ 
Sbjct: 182 LAEAREQLQTIS---------------------FQSQSVQAQLRASLVKSQNALDLVTLR 220

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P+AGT++  ++ +       +  L+K+VP       +       I  ++ G  A + F 
Sbjct: 221 APVAGTVIDLEAQT-GLVVNNTTSLLKLVPIDD-LVAQTFARDSDIAFIRAGQDAEISFT 278

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPA 411
            Y           +  +       +       ++ V L ++  + S N    EL+ G   
Sbjct: 279 TYDKTIYGTLPGSVTLVSQDSLPPEPPYD-YPHFPVTLALSAQSLSKNGKTFELQPGMAL 337

Query: 412 EVLFTAKNTTLAQEIIH 428
                 +  T+ Q +  
Sbjct: 338 NAEIKLQKRTIFQLMFS 354



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 72/193 (37%), Gaps = 1/193 (0%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            R  P     +          ++ ++  + I+  VS  G+++   +  ++ +P  G++K+
Sbjct: 26  SRPSPVLPAVLVGSLSALFFVVVYFASTVKIDQIVSVPGKLVTRRSTQDLTTPEPGVVKR 85

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V++G  + QG  L+  +    T  +D  +  ++     + +E++ +       +  + 
Sbjct: 86  VLVKSGDVVQQGQELVVLDPRVQTSNVDELQKQLEAEAARLQSEQARIRETIRGLET-QL 144

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             + +  +    L +  ++           +  + +        +       ++  + LR
Sbjct: 145 EIDRQILEPFKQLAEQGASSQLQLIEKQRQLEATRRSLAEAREQLQTISFQSQSVQAQLR 204

Query: 190 ALLSSHQKDLTMM 202
           A L   Q  L ++
Sbjct: 205 ASLVKSQNALDLV 217


>gi|308205587|gb|ADO19060.1| secretion protein [Nostoc flagelliforme str. Sunitezuoqi]
          Length = 206

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 73/196 (37%), Gaps = 3/196 (1%)

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           ++I +   +     A    +  + +  N++  AD  SK++  +   + + + +P+AGT+ 
Sbjct: 6   KNILDKIADNKQRIAAIDSQFMKVILDNEQRLADINSKISQAQLNVKYQELRAPVAGTVF 65

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             Q+ +    A  +  L++IVP ++       +T K I  V+KG    +R   +      
Sbjct: 66  DLQAKNPGFVATPTTKLLQIVP-NENYIAEVFITNKDIGFVRKGMKVDIRIDSFPYSEFG 124

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNNIELRNGFPAEVLFTA-KN 419
             K  +  I       D   Q   +  ++ L    L     ++ L++G          + 
Sbjct: 125 DIKGELAGIGSDALPPDQTHQFYRFPAKLHLDKQSLVIRGKSVPLQSGMSISANIKVREE 184

Query: 420 TTLAQEIIHPITDNWP 435
            T+        T    
Sbjct: 185 RTVLSLFTELFTKQID 200


>gi|78062686|ref|YP_372594.1| multidrug resistance efflux pump-like [Burkholderia sp. 383]
 gi|77970571|gb|ABB11950.1| Multidrug resistance efflux pump-like protein [Burkholderia sp.
           383]
          Length = 431

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 60/442 (13%), Positives = 145/442 (32%), Gaps = 61/442 (13%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVS--SSGEILNEDNVVEIKSPFSGIIKK 69
           + P S++    LS+      +T   L+ +  + +   SG +     ++ + +P    ++ 
Sbjct: 32  DVPVSMRFFCYLSLAMFAMFVT--ALVELSYANTESVSGMLTPRSGLIGVSAPPGWAVRD 89

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V     +  G  LL    +        +  +++ +R  +D ++  +    +   +  K
Sbjct: 90  VYVGKDQYVKAGQRLL---AVTRDTSFVSQANNVQGMRAALDRQRVEVTQQIDAARLEYK 146

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +   +  Q +   G+     S+       I   Y   + ++ ++    +  L+  N+ + 
Sbjct: 147 SSVQQINQQIAAQGESSGLISRQIQDQKRIVDEYGERRARVKQLLDEQVVTLEQYNQVNT 206

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                    +DL + +    KNA+  + DL+  +     +  EL+    E      +I+E
Sbjct: 207 QYLQAGQAYQDLLLRRAELAKNAMKLRGDLDTMQSKYDGANAELKIKQEELNAKEYNIDE 266

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++                                         + +P  G IV     
Sbjct: 267 NVNQ----------------------------------------VLYAPADGQIVRLDVV 286

Query: 307 SSSNYA-QQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                       +++I+P           +   +   VKKG    V +  Y   +   ++
Sbjct: 287 -QGGVIDPPGTRVVEILPAKADGLIAEVYIPSSKAGFVKKGQEVKVAYASYPVEKFGTYR 345

Query: 365 AIIEKIDPIISQQ------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFT 416
             +  I P+           +    Q Y++  +++ D   AF    + LR G   +    
Sbjct: 346 GKVLSISPVAFSAKELNLPGDAATPQTYFKTWVELADRTPAFEGRPLSLRAGMMLKADIV 405

Query: 417 AKNTTLAQEIIHPITDNWPKIF 438
            +  +L + +  P+     ++F
Sbjct: 406 LERRSLLEWLFEPLYRIRQRLF 427


>gi|83717762|ref|YP_439337.1| secretion protein [Burkholderia thailandensis E264]
 gi|167577746|ref|ZP_02370620.1| secretion protein, putative [Burkholderia thailandensis TXDOH]
 gi|257142456|ref|ZP_05590718.1| secretion protein, putative [Burkholderia thailandensis E264]
 gi|83651587|gb|ABC35651.1| secretion protein, putative [Burkholderia thailandensis E264]
          Length = 431

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 55/437 (12%), Positives = 149/437 (34%), Gaps = 51/437 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P S++    LSI      I   + L    + +  G +     ++ + +P    +++  
Sbjct: 32  DVPISMRFFCYLSIAMFAMFIVALVRLTYANTENVMGMLTPRSGLIGVGAPPGWAVREVF 91

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V     +  G  LL+      T  +  +  +++ +R  I  ++  +              
Sbjct: 92  VAKDQHVKAGQKLLSV--TRDTSFVS-QANNVQGMRESIKRQRVEVG------------- 135

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                Q +D     + +  +  N  I++   S  +              ++ +    + +
Sbjct: 136 -----QQIDAAKLEYQSTIQQINQQIAAFDESRGL--------------IDKQIQDQKRI 176

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +S +Q+    +K L  +  V+    NQ      +++   ++ +  + ++ ++  +L  + 
Sbjct: 177 VSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDL 236

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               + Y    + +L+  Q     +   +         + + +P  G IV        + 
Sbjct: 237 ETVQSKYDGS-NAELKIKQEELNSKEYNI----DESVNQVLYAPADGQIVRLDVV-QGSV 290

Query: 312 A-QQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  +++I+P           +   +   V+ G    + +  Y   +   ++  +  
Sbjct: 291 IDPPGTRVVEILPAKADGLIAELYIPSSKAGFVRPGQEVKLAYGSYPVEKFGTYRGKLLS 350

Query: 370 IDPIISQQ------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTT 421
           + P+           +N   Q Y++  +++ D   AF    + L+ G         +  T
Sbjct: 351 VSPVAFTAKELNLPADNGAPQTYFKSWVELVDRNPAFEGKALALKAGMTLRADIVLEKRT 410

Query: 422 LAQEIIHPITDNWPKIF 438
           L + +  P+     +IF
Sbjct: 411 LLEWLFEPLYRIRQRIF 427


>gi|113474124|ref|YP_720185.1| secretion protein HlyD [Trichodesmium erythraeum IMS101]
 gi|110165172|gb|ABG49712.1| secretion protein HlyD [Trichodesmium erythraeum IMS101]
          Length = 627

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 125/339 (36%), Gaps = 10/339 (2%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             L ++  +     ++  +   D  +  +  ++E     RE Q +    +     +K+  
Sbjct: 285 YQLSEIRWEKAMKEVERYRGLWDQGVVTEIQLVEHENIGRERQRMLEQSQADIEQAKLRI 344

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQ 213
                 Y+ +  +      I    L L  +      +++  + D+   +  L E+ +  +
Sbjct: 345 EEQEGSYKRVIHQ--GKADIKQAELRLAEQKGSYERIINQGEADIEQAELRLAEQKSSYE 402

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             +NQ +  + ++ L L    +EQ+N  + I      A  +    L+ +   +   Q   
Sbjct: 403 MVINQVKADIKQAELRL----NEQENSSKTITHSGKIAISKIQEQLQSMDSQIVSIQGEI 458

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A    ++  L    EQ+ + +   GTI         +  QQ + +++I P      ++A 
Sbjct: 459 AQTNKEIDSLNFQLEQRVVRAQQGGTIFNFPIKGVGDVVQQGEMIVEIAPRETSLLLKAD 518

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +   +   +++G    ++F  Y           +++I P    Q+        YE+ +++
Sbjct: 519 MATTESGSLREGMEVKMKFDAYPFQDYGVVGGWLKEISPTSKMQETAEGNVAIYELKVEL 578

Query: 394 TD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +  +  ++  + LR G  A      +   L   I+ P 
Sbjct: 579 DEYCIPTANECVVLRPGDTATAEVVVRQRPLIDFILDPF 617



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 107/305 (35%), Gaps = 20/305 (6%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSP 62
           F  K L    P    R  L  +IG + +   W +   ++ + S+ G +  +    + +  
Sbjct: 50  FATKELLDALPQRWTRGLLYLLIGFVAIALPWGMFSQVDETGSARGRLEPQGGTFK-QEL 108

Query: 63  --------FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
                    +  ++K  V+ G +I  G  L+  E     D +   ++ ++N +  +   +
Sbjct: 109 NLTFTAYTQTAKVEKVYVKQGDKIKAGDILIELESRPIHDRLAQLQIQLQNQKNRLSKIQ 168

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
              + L  +    E+  ES++ + L  +G+       +           L       +++
Sbjct: 169 QQKNQLEIELRTQERQNESQKLEKLAQVGQARQNAQSLKTMYNLQEQEKLTQVHQAEQNL 228

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
              R  L  +       +   +++L  + + L  +        NQ +R +  S +  + +
Sbjct: 229 AALRRTLNLQREEKLVQVYQAEENLGALKRALSLQKEEKMAQFNQAKRQLKDSQIAYQLS 288

Query: 234 IHEQKNMLRHINELYDEANL---------EFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               +  ++ +       +          E  N  +E  R LEQ+Q        ++   E
Sbjct: 289 EIRWEKAMKEVERYRGLWDQGVVTEIQLVEHENIGRERQRMLEQSQADIEQAKLRIEEQE 348

Query: 285 KTREQ 289
            + ++
Sbjct: 349 GSYKR 353


>gi|53716874|ref|YP_105675.1| putative secretion protein [Burkholderia mallei ATCC 23344]
 gi|76817540|ref|YP_335449.1| secretion protein [Burkholderia pseudomallei 1710b]
 gi|124382154|ref|YP_001024101.1| putative secretion protein [Burkholderia mallei NCTC 10229]
 gi|126446477|ref|YP_001078505.1| putative secretion protein [Burkholderia mallei NCTC 10247]
 gi|126456523|ref|YP_001075766.1| putative secretion protein [Burkholderia pseudomallei 1106a]
 gi|226198098|ref|ZP_03793670.1| putative secretion protein [Burkholderia pseudomallei Pakistan 9]
 gi|242311855|ref|ZP_04810872.1| putative secretion protein [Burkholderia pseudomallei 1106b]
 gi|254193535|ref|ZP_04899969.1| putative secretion protein [Burkholderia pseudomallei S13]
 gi|254264410|ref|ZP_04955275.1| putative secretion protein [Burkholderia pseudomallei 1710a]
 gi|52422844|gb|AAU46414.1| putative secretion protein [Burkholderia mallei ATCC 23344]
 gi|76582013|gb|ABA51487.1| secretion protein, putative [Burkholderia pseudomallei 1710b]
 gi|124290174|gb|ABM99443.1| putative secretion protein [Burkholderia mallei NCTC 10229]
 gi|126230291|gb|ABN93704.1| putative secretion protein [Burkholderia pseudomallei 1106a]
 gi|126239331|gb|ABO02443.1| putative secretion protein [Burkholderia mallei NCTC 10247]
 gi|169650288|gb|EDS82981.1| putative secretion protein [Burkholderia pseudomallei S13]
 gi|225929974|gb|EEH25989.1| putative secretion protein [Burkholderia pseudomallei Pakistan 9]
 gi|242135094|gb|EES21497.1| putative secretion protein [Burkholderia pseudomallei 1106b]
 gi|254215412|gb|EET04797.1| putative secretion protein [Burkholderia pseudomallei 1710a]
          Length = 431

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/437 (13%), Positives = 150/437 (34%), Gaps = 51/437 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P S++    LSI+     I   + L    + S  G +     ++ + +P    +++  
Sbjct: 32  DVPISMRFFCYLSIMMFAMFIVALVRLTYANTESVMGMLTPRSGLIGVGAPPGWAVREVF 91

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V     +  G  LL+      T  +  +  +++ +R  I  ++  +              
Sbjct: 92  VAKDQHVKAGQKLLSV--TRDTSFVS-QANNVQGMRESIKRQRVEVG------------- 135

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                Q +D     + +  +  N  I++   S  +              ++ +    + +
Sbjct: 136 -----QQIDAAKLEYQSTIQQINQQIAAFDESRGL--------------IDKQIQDQKRI 176

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +S +Q+    +K L  +  V+    NQ      +++   ++ +  + ++ ++  +L  + 
Sbjct: 177 VSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDL 236

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               + Y    + +L+  Q     +   +         + + +P  G IV        + 
Sbjct: 237 ETVQSKYDGS-NAELKIKQEELNSKEYNI----DESVNQVLYAPADGQIVRLDVV-QGSV 290

Query: 312 A-QQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  +++I+P           +   +   VK G    + +  Y   +   ++  +  
Sbjct: 291 IDPPGTRVVEILPAKADGLIAELYIPSSKAGFVKPGQEVKLAYGSYPVEKFGTYRGKLLS 350

Query: 370 IDPIISQQ------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTT 421
           + P+           +N   Q Y++  +++ D   AF    + L+ G         +  T
Sbjct: 351 VSPVAFTAKELNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTLRADIVLEKRT 410

Query: 422 LAQEIIHPITDNWPKIF 438
           L + +  P+     +IF
Sbjct: 411 LLEWLFEPLYRIRQRIF 427


>gi|67639403|ref|ZP_00438264.1| putative secretion protein [Burkholderia mallei GB8 horse 4]
 gi|254173997|ref|ZP_04880660.1| putative secretion protein [Burkholderia mallei ATCC 10399]
 gi|254191130|ref|ZP_04897635.1| putative secretion protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254200480|ref|ZP_04906845.1| putative secretion protein [Burkholderia mallei FMH]
 gi|254204504|ref|ZP_04910857.1| putative secretion protein [Burkholderia mallei JHU]
 gi|254301786|ref|ZP_04969229.1| putative secretion protein [Burkholderia pseudomallei 406e]
 gi|254356738|ref|ZP_04973013.1| putative secretion protein [Burkholderia mallei 2002721280]
 gi|147748092|gb|EDK55167.1| putative secretion protein [Burkholderia mallei FMH]
 gi|147754090|gb|EDK61154.1| putative secretion protein [Burkholderia mallei JHU]
 gi|148025765|gb|EDK83888.1| putative secretion protein [Burkholderia mallei 2002721280]
 gi|157811618|gb|EDO88788.1| putative secretion protein [Burkholderia pseudomallei 406e]
 gi|157938803|gb|EDO94473.1| putative secretion protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|160695044|gb|EDP85014.1| putative secretion protein [Burkholderia mallei ATCC 10399]
 gi|238519941|gb|EEP83406.1| putative secretion protein [Burkholderia mallei GB8 horse 4]
          Length = 427

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 57/437 (13%), Positives = 150/437 (34%), Gaps = 51/437 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P S++    LSI+     I   + L    + S  G +     ++ + +P    +++  
Sbjct: 28  DVPISMRFFCYLSIMMFAMFIVALVRLTYANTESVMGMLTPRSGLIGVGAPPGWAVREVF 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V     +  G  LL+      T  +  +  +++ +R  I  ++  +              
Sbjct: 88  VAKDQHVKAGQKLLSV--TRDTSFVS-QANNVQGMRESIKRQRVEVG------------- 131

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                Q +D     + +  +  N  I++   S  +              ++ +    + +
Sbjct: 132 -----QQIDAAKLEYQSTIQQINQQIAAFDESRGL--------------IDKQIQDQKRI 172

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +S +Q+    +K L  +  V+    NQ      +++   ++ +  + ++ ++  +L  + 
Sbjct: 173 VSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDL 232

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               + Y    + +L+  Q     +   +         + + +P  G IV        + 
Sbjct: 233 ETVQSKYDGS-NAELKIKQEELNSKEYNI----DESVNQVLYAPADGQIVRLDVV-QGSV 286

Query: 312 A-QQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  +++I+P           +   +   VK G    + +  Y   +   ++  +  
Sbjct: 287 IDPPGTRVVEILPAKADGLIAELYIPSSKAGFVKPGQEVKLAYGSYPVEKFGTYRGKLLS 346

Query: 370 IDPIISQQ------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTT 421
           + P+           +N   Q Y++  +++ D   AF    + L+ G         +  T
Sbjct: 347 VSPVAFTAKELNLPADNGAPQTYFKSWVELVDRKPAFEGKALSLKAGMTLRADIVLEKRT 406

Query: 422 LAQEIIHPITDNWPKIF 438
           L + +  P+     +IF
Sbjct: 407 LLEWLFEPLYRIRQRIF 423


>gi|167573016|ref|ZP_02365890.1| putative secretion protein [Burkholderia oklahomensis C6786]
          Length = 431

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/437 (12%), Positives = 149/437 (34%), Gaps = 51/437 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P S++    LSI      +   + L    + S  G +     ++ + +P    +++  
Sbjct: 32  DVPVSMRFFCYLSIAMFAMFVVALVRLTYANTESVMGMLTPRTGLIGVGAPPGWAVRELY 91

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V     +  G  LL+      T  +  +  +++ +R  I  ++  +D             
Sbjct: 92  VAKDQHVKAGQKLLSV--TRDTSFVS-QANNVQGMRESIKRQRVEVD------------- 135

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                Q +D     + +  +     I+++  S              R  ++ +    + +
Sbjct: 136 -----QQMDAAKLEYQSTIEQIKQQIAALSES--------------RALIDKQIQDQKRI 176

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +S +Q+    +K L  +  V+    NQ      ++    ++ +  + +++++  +L  + 
Sbjct: 177 VSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQAGQAYQDLMLRKADLVKNAMKLRGDL 236

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               + Y    + +L+  Q     +   +         + + +P  G IV        + 
Sbjct: 237 ETVQSKYDGS-NAELKIKQEELNSKEYNI----DESVNQVLYAPADGQIVRLDVV-QGSV 290

Query: 312 A-QQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  +++I+P           +   +   +K G    + +  Y   +   ++  +  
Sbjct: 291 IDPPGTRVVEILPAKADGMIAELYIPSSKAGFIKPGQEVKLAYGSYPVEKFGTYRGKLVS 350

Query: 370 IDPIISQQ------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTT 421
           + P+           +    Q Y++  + + D   AF  + + L+ G         +  +
Sbjct: 351 VSPVAFTAKELNLPADAGSPQTYFKSWVDLADRKPAFEGSPLALKAGMTLRADIVLEKRS 410

Query: 422 LAQEIIHPITDNWPKIF 438
           L + +  P+     ++F
Sbjct: 411 LLEWLFEPLYRIRQRMF 427


>gi|312877144|ref|ZP_07737114.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311796044|gb|EFR12403.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 466

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 81/445 (18%), Positives = 165/445 (37%), Gaps = 37/445 (8%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     +T + +  IIGL+ WSI+  I+I+V   G I   ++   I S   G +K+  V+
Sbjct: 23  PKYGLFITYILLALIIGLVLWSIVGEIDINVKVQGIIRPWEDEARIISYVGGKVKEIFVK 82

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALD------------ 118
            G  + +G  L   +D E     DL K  ++        +   + +++            
Sbjct: 83  EGEYVKKGEVLFKIDDEEYVKKRDLLKQQLREYEKKVSDLKELRKSIEKGESLRNKNNVY 142

Query: 119 ---------FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN-YGISSVYRSLKMKL 168
                     +N      E+    RE  ++DF  +  S   K+ N     S  + +K  +
Sbjct: 143 YLRYLSYSYEVNKLKKAAEEERVQREYSIMDFKKQIESLDEKIKNIDKFESTLKEIKEIV 202

Query: 169 TRMRSIYLNRLDLENKSSLLRAL--LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
            +   I L + D+     +L  +   + H K  +   ++  K  +S+ +    E    KS
Sbjct: 203 DKGEQIKLAKYDIGYMGFILSEIEVYNQHVKIKSDDSSIQRKILISKIETKLDELKQSKS 262

Query: 227 TLELRENIHEQKNMLRHI--NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            L L++   E++  L +I  ++   +      + L++I  ++        +    L   E
Sbjct: 263 ELVLQKQKIERQLKLLNISGDDTKGDIEKYQLDMLQQIDNEISNLSNEIKNLKISLDETE 322

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL-TYIRAKVTPKQIQHVK 343
           K  E   I +   G + Y+    S         + +IV        I   +   +   ++
Sbjct: 323 KLIESCNIRAEKDGYVEYSSEMVSGVVVSSGAEIGRIVNSQAKGFKIIGYIPNTKSSGIE 382

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           K     V+      +     +  + ++   I     N Q   +YEV +++ +++     I
Sbjct: 383 KEQRVKVKLTGAGGLN--VVEGKVTRVSRDIKVATQNGQG--FYEVEVEVKNVS---KGI 435

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIH 428
            LR G   E+    +   L + ++ 
Sbjct: 436 NLRAGQACEMSIVVEQKRLIKWVLE 460


>gi|163750429|ref|ZP_02157669.1| toxin secretion, membrane fusion protein [Shewanella benthica KT99]
 gi|161329919|gb|EDQ00905.1| toxin secretion, membrane fusion protein [Shewanella benthica KT99]
          Length = 415

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 67/418 (16%), Positives = 140/418 (33%), Gaps = 52/418 (12%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             L  II I+  +++S     E      G ++ +  +++  +  SG I+   V  G  + 
Sbjct: 35  TILSIIIAIVFFLSFSHYARKETV---RGYLVPDKGLIKTFANRSGNIEILHVSEGDIVK 91

Query: 80  QGTPLLTFEDIET-TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
           +G+PL T     +     +L +  I+ LR  +   +            +E++  S  E  
Sbjct: 92  KGSPLATIVLRRSMLSGEELSESLIEELRLQLTLLQ------------VEQSVNSTMEVK 139

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                K   T S+     ++ +   L  KL    +  +                      
Sbjct: 140 DTARLKISMTDSRASLAVLAKLEALLVEKLALQMAQQVQH-------------------- 179

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               K L++   +S  D   Q+       + +R+ I    +    I    + A+ E    
Sbjct: 180 ----KKLYKDGFLSTLDYQSQQEKF----IAVRQEIENLTSNQVQIQSQLNSASAELDVL 231

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             + +       R  ++   ++   E    +  I +  AGT+   Q      +   S+PL
Sbjct: 232 PSQYALKAGDLARRRSELKRQIDETENNY-RYVIRATEAGTVASIQIV-EGEFVVNSRPL 289

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP----II 374
           M ++P          +  +    VK G  A +RF  +   R     + + +ID       
Sbjct: 290 MSLIPQGAQLVAELLLPTRSAGFVKLGDEARLRFDAFPYQRFGFLASQVSRIDKALLLDG 349

Query: 375 SQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             +     ++  Y +  +++        +   L++G   E        +L   ++ PI
Sbjct: 350 EARVPVTLSEPVYRIRTQLSKQDMLAYGDKFPLKSGMLLEADIVLDRRSLLDWLLDPI 407


>gi|13235469|emb|CAC33704.1| Alkaline protease secretion protein [Rickettsia rickettsii]
 gi|13235478|emb|CAC33637.1| Alkaline protease secretion protein [Rickettsia montanensis]
          Length = 113

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 7/110 (6%)

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE---YYEVILKI 393
           K I  V +G  A +RF  +       F   +  I P I Q +     Q+   YY   ++I
Sbjct: 2   KNIDSVHEGLVAKIRFSAFKSRTTPTFTGKVVSISPDIVQDERQHPGQQQDNYYVARVEI 61

Query: 394 TDLAFSD----NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
               F+      N+EL  G  AEV       TL + ++ P+TD   K F 
Sbjct: 62  DMDEFNKVAKVKNLELHPGMQAEVQIVTGTRTLLRYLLDPVTDTAFKAFR 111


>gi|302871802|ref|YP_003840438.1| secretion protein HlyD family protein [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574661|gb|ADL42452.1| secretion protein HlyD family protein [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 464

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 71/440 (16%), Positives = 164/440 (37%), Gaps = 41/440 (9%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +T + +  +IGL+ WSI+  I+I+V+  G I   ++  ++ S   G +K+  V+    + 
Sbjct: 29  ITYILLALVIGLVLWSIVGKIDINVTVQGIIRPWEDEAKVISYVGGKVKEVFVKESEYVK 88

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV------------- 126
           +G  L   +D E     D  K  +      ID  K   + +     +             
Sbjct: 89  KGDVLFKIDDEEYVKKRDFLKQQLSEYEKKIDDLKELRNSIEKGESLKNKNTYYLRYLSY 148

Query: 127 ----------LEKAFESREEQLLDFLGKYHSTCSKVFN-YGISSVYRSLKMKLTRMRSIY 175
                      E+A   RE  ++DF  +  S   K+ N     S+ + +K  +++   + 
Sbjct: 149 SYEIKKLKKAAEEARVQREYSIMDFKKQIESLDEKIKNIDKFESMLKEIKEVVSKGEQVK 208

Query: 176 LNRLDLE------NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           L + D+       ++       + +      M K L  K     + L++  +   +  L+
Sbjct: 209 LTKYDIGYLGFILSEIEDYNQQVKTKSDGSDMKKILILK---IDSKLDELRQSKSELILQ 265

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            ++   + + ++   ++   +        L++I  ++        +    L   ++  E 
Sbjct: 266 KQKIEGQLRLLVISGDDTKGDIEKYKLEVLQQIDSEISSLTHEIKNLKINLEETKRLIES 325

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP-HSKLTYIRAKVTPKQIQHVKKGYTA 348
            +I +   G + Y+    S         + +IV   SK   +   +   +   +++G   
Sbjct: 326 CSIRAEKDGYVEYSAELFSGAAISSGAEIGRIVDGQSKRFKVIGYIPNTKSSGIERGQRV 385

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            V+      ++    +  + ++   I  +  N   Q +YEV +++ ++    N I LR G
Sbjct: 386 KVKLAGTDGLK--VVEGKVTRVSRDI--KVANENGQGFYEVEVEVRNVG---NGINLRAG 438

Query: 409 FPAEVLFTAKNTTLAQEIIH 428
              E+    +   L + +  
Sbjct: 439 QACEMSIVVEQKRLIEWVFE 458


>gi|91781152|ref|YP_556359.1| anibiotic ABC transporter efflux pump [Burkholderia xenovorans
           LB400]
 gi|91693812|gb|ABE37009.1| ABC antibiotic efflux pump, membrane fusion protein, HlyD subfamily
           [Burkholderia xenovorans LB400]
          Length = 419

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 56/405 (13%), Positives = 129/405 (31%), Gaps = 57/405 (14%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
             +G++L     + +  P SG +    V+ G  + +GT L+       T +   ++   +
Sbjct: 58  RVAGQLLPAKGALNVSPPISGTVVSTSVKEGQPVEKGTELMVISAEVATQMGGTRESIAE 117

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L+      +  L                             +   ++ +     +    
Sbjct: 118 QLKLQRSRLEMDL-----------------------------NGERQLNSEERGGLQARS 148

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                ++  I L +   E ++ L +A L    K       + E+   S + ++QQE +V 
Sbjct: 149 TALQAQLTQIGLQKSQRERQAQLAQAQLDKLLK-------MREEGYASNSQVDQQEGVVI 201

Query: 225 KSTL---ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +     +L     + +  L  I +   E  +   N+  +I R L    +T  +  S+  
Sbjct: 202 DAGARLQDLARQRLDVEQQLTQIRQQLRELPINSLNHRHDIERKLADIDQTMIENESR-- 259

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                     + +P   T+    +          Q  + ++P       +  V  + I  
Sbjct: 260 ------RAVILRAPQEATVAAMLA-KPGQIISNGQTAVSLLPKGAELEAQLMVPSRAIGF 312

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDP-------IISQQDNNLQTQEYYEVILKIT 394
           + +G    +R+  Y   +  +    I ++         I +    +   +++Y V + + 
Sbjct: 313 IHEGDRVVLRYQAYPYQKFGQQYGRIVELSRTALTPLEIANMTGQSNVQEQHYRVTVALD 372

Query: 395 DLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
                       LR G   E     +N  L + +  P+     + 
Sbjct: 373 RQDIMTYGHSEILRPGMALEADILLENRRLIEWVFEPLLAIGRRA 417


>gi|107026527|ref|YP_624038.1| multidrug resistance efflux pump-like [Burkholderia cenocepacia AU
           1054]
 gi|116692284|ref|YP_837817.1| multidrug resistance efflux pump-like protein [Burkholderia
           cenocepacia HI2424]
 gi|170735713|ref|YP_001776973.1| multidrug resistance efflux pump-like protein [Burkholderia
           cenocepacia MC0-3]
 gi|105895901|gb|ABF79065.1| multidrug resistance efflux pump-like protein [Burkholderia
           cenocepacia AU 1054]
 gi|116650284|gb|ABK10924.1| multidrug resistance efflux pump-like protein [Burkholderia
           cenocepacia HI2424]
 gi|169817901|gb|ACA92483.1| multidrug resistance efflux pump-like protein [Burkholderia
           cenocepacia MC0-3]
          Length = 431

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 50/439 (11%), Positives = 146/439 (33%), Gaps = 55/439 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVS--SSGEILNEDNVVEIKSPFSGIIKK 69
           + P S++    LS+      +T   L+ +  + +   SG +     ++ + +P    ++ 
Sbjct: 32  DVPVSMRFFCYLSLAMFAMFVT--ALVELSYANTESVSGMLTPRSGLIGVGAPPGWAVRD 89

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V     +  G  LL    +        +  +++ +R  +D ++               
Sbjct: 90  VYVGKDQHVKAGQRLL---AVTRDTSFVSQANNVQGMRAALDRQR--------------- 131

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                               ++  +        S++    ++ +   +R  ++ +    +
Sbjct: 132 -----------------VEVTQQIDAARLEYRSSVQQINQQIAAQGESRGLIDRQIQDQK 174

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            ++  + +    +K L ++  V+    NQ      ++    ++ +  +  + ++  +L  
Sbjct: 175 RIVDEYGERRARVKQLLDEQVVTLEQYNQVNTQYLQAGQAYQDLLLRRAELAKNAMKLRG 234

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           + +   + Y    + +L+  Q     +   +         + + +P  G IV        
Sbjct: 235 DLDTMQSKYDG-ANAELKIKQEELNAKEYNI----DENVNQVLYAPADGQIVRLDVV-QG 288

Query: 310 NYA-QQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                    +++I+P           +   +   VKKG    V +  Y   +   ++  +
Sbjct: 289 GVIDPPGTRVVEILPAKADGLIAEVYIPSSKAGFVKKGQEVKVAYASYPVEKFGTYRGKV 348

Query: 368 EKIDPIISQQ------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
             I P+           +    Q Y++  +++ D   +F    + LR G   +     + 
Sbjct: 349 LSISPVAFSAKELNLPGDAAVPQTYFKTWVELADRTPSFDGRPLSLRAGMMLKADIVLER 408

Query: 420 TTLAQEIIHPITDNWPKIF 438
            +L + +  P+     ++F
Sbjct: 409 RSLLEWLFEPLYRIRQRLF 427


>gi|332142921|ref|YP_004428659.1| membrane-fusion protein [Alteromonas macleodii str. 'Deep ecotype']
 gi|332143034|ref|YP_004428772.1| membrane-fusion protein [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552943|gb|AEA99661.1| membrane-fusion protein [Alteromonas macleodii str. 'Deep ecotype']
 gi|327553056|gb|AEA99774.1| membrane-fusion protein [Alteromonas macleodii str. 'Deep ecotype']
          Length = 417

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 62/429 (14%), Positives = 130/429 (30%), Gaps = 54/429 (12%)

Query: 13  HPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNV-VEIKSPFSGIIKKF 70
            P  +       ++  I   + +  L       S  G +     V         G +   
Sbjct: 25  TPKPVYSAIAFVLVAWIATALVYLNLGSYARKASVDGWLEPSHGVFKLYADARRGNVVDV 84

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            +  G  + +G PL+      +  L +        L   ++ +++               
Sbjct: 85  LIHEGQHVEKGAPLVKINYSNSDALGNRVSSQ---LLIELEAKQA--------------- 126

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              R  Q +  L   H          +S   R+L               DL +   L + 
Sbjct: 127 ---RTHQSISRLRALHQAQLTGLEQRLSQAKRALD--------------DLNDIVDLAKI 169

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLN--QQERIVYKSTLELRENIHEQKNMLRHINELY 248
                 +     + L  +  +S  +L     +RI  +  L+L E     +          
Sbjct: 170 QWVMATEHWENAQLLLNQGHISHAELENHTIQRITAQQQLKLAERDSSTE------QANI 223

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                E A   ++ + +L   + T++D   ++   +   E+  I +P +G I      + 
Sbjct: 224 ASLTHELATLPQQQANELASFENTYSDLKQQIVSHKSNYEET-IYAPHSGYISGLHVKA- 281

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 S+PL+ ++P       R  V  +    +++G    +R+  +   +    K  I 
Sbjct: 282 GYTVDSSRPLLTLLPKDADIQARIAVPVRAAGFLREGQALHIRYDAFPYQKFGVQKGEIL 341

Query: 369 KIDPIISQ-----QDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
            + P +              +  Y V   I+        N+I L+ G            T
Sbjct: 342 NVSPSLVLPGELIDAPIAINEPAYLVTAAISTKEILAYGNHISLKAGMTFSADVHLSQRT 401

Query: 422 LAQEIIHPI 430
           L + ++ P+
Sbjct: 402 LMEWLMEPL 410


>gi|254508687|ref|ZP_05120801.1| toxin secretion, membrane fusion protein [Vibrio parahaemolyticus
           16]
 gi|219548351|gb|EED25362.1| toxin secretion, membrane fusion protein [Vibrio parahaemolyticus
           16]
          Length = 414

 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 69/434 (15%), Positives = 147/434 (33%), Gaps = 47/434 (10%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           + +   +    P S+  ++L+    ++  I +          +  G +L +  V+++   
Sbjct: 13  NKLTGRVILTQPNSMYAISLVISSLLLIAILYLSQFQYARKETVRGYLLPKSGVIKVYVD 72

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +GI+ +  V     I QG PL    +    DL D  +                      
Sbjct: 73  RAGILAELFVSEEGPIHQGEPLAKIRN--RRDLADGTE---------------------- 108

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
               L  A  +  +  +  L K  +    VF+     + + L       ++I   R    
Sbjct: 109 ----LSSALSNEIKIQIQALKKEMTLAHAVFDADEKRIRQQLYTLNKSKQAIIKTR---- 160

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 +  L   ++     + L ++  +S   L+  E    ++  +      E  N+  
Sbjct: 161 ---QTNQRRLKLREEIYVKNRALHQEGFLSSTQLSLIEEAYLQTLEDSEFLEREITNIDI 217

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            IN L  E  +       +++       R  ++  S+L   +   E   + +P +G +  
Sbjct: 218 EINNLELEKLIIPQQRELKVTT----THRQLSELKSQLATQDNQLEYIKV-APSSGFVTA 272

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            QS +S  +   + PL+ IVP +     +  +  +    ++      +RF  +   +   
Sbjct: 273 IQS-TSGEHVTPNSPLLSIVPENTSLEAQLLLPTRSAGFIQLNDEVHLRFDAFPYQKFGF 331

Query: 363 FKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFT 416
            K  +  ID  +     +       +  Y V +++   A         L+ G  AE    
Sbjct: 332 TKGEVINIDQSLILPGEKTLPIEVNEAVYRVRVRLNSQAVMAYGKAFPLKVGMLAEADII 391

Query: 417 AKNTTLAQEIIHPI 430
            +  TL Q ++ PI
Sbjct: 392 LEKRTLLQWLLDPI 405


>gi|150260786|ref|ZP_01917514.1| putative exported protein [Yersinia pestis CA88-4125]
 gi|218927314|ref|YP_002345189.1| hypothetical protein YPO0099 [Yersinia pestis CO92]
 gi|115345925|emb|CAL18787.1| putative exported protein [Yersinia pestis CO92]
 gi|149290194|gb|EDM40271.1| putative exported protein [Yersinia pestis CA88-4125]
          Length = 411

 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 72/435 (16%), Positives = 151/435 (34%), Gaps = 64/435 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +  +  + ++ +I LI +         ++ +GE++++ + + I SP  G I K  VE 
Sbjct: 13  TFIAALCAIFLVLLITLIIYGTYTR---RINVNGEVISQPHPINIFSPQQGFITKKWVEV 69

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L   +   TT   ++   S++ +   +    S    +NN     E    + 
Sbjct: 70  GDIVRKGQHLYQIDVSRTTFSGNVSLNSLEAINNQLSQIDS---IINNTQKNKELTLLNL 126

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            +QL  +   +  +   V N G                                   +  
Sbjct: 127 RQQLAQYQKAHKKSQELVDNAG---------------------------------KGMDD 153

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++ +        +  ++++ L  Q  + Y+     +    +       I +L  E +  
Sbjct: 154 MRRTMASYGTYQRQGLITKDQLTNQRSLFYQQQNAFQSLNTQLIQESLQIAKLESEISTR 213

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            +++  +IS+ L Q      D   +L  +        I SP  G I      +       
Sbjct: 214 ASDFDNDISQYLFQK----GDLKRQLAEV-DASGMLLINSPSDGKIENMSV-TQGQMVNV 267

Query: 315 SQPLMKIVPHSKL---TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +  L+++ P         +   V    + ++  G    +R+  +   +  +F   I  I 
Sbjct: 268 NDSLVQLTPSDNPYYCLVL--WVPNNSVPYINTGDKVNIRYDAFPFEKFGQFPGRIISIS 325

Query: 372 PI-ISQQD-----------NNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTA 417
            + +SQQ+           N    + YY+VI+ + D+ F      + L NG  A V    
Sbjct: 326 NVPVSQQEIASYNIAPRLPNGGLIEPYYKVIVALDDIHFRYQSKPLMLSNGLKANVTLFL 385

Query: 418 KNTTLAQEIIHPITD 432
           +   L Q ++ P  D
Sbjct: 386 EKRPLYQWMLSPFYD 400


>gi|238795978|ref|ZP_04639490.1| hypothetical protein ymoll0001_23770 [Yersinia mollaretii ATCC
           43969]
 gi|238720183|gb|EEQ11987.1| hypothetical protein ymoll0001_23770 [Yersinia mollaretii ATCC
           43969]
          Length = 410

 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 55/430 (12%), Positives = 132/430 (30%), Gaps = 54/430 (12%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
            P       ++++  I+ L+ + ++      V  +G ++ +  V  I +P +G+I     
Sbjct: 8   TPVGASLWAIMALALIVSLLAFMVIGTYTQRVRLTGTVVQQPAVARITAPHTGVIVSSFA 67

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           E G  +  G  +        T            L+      +  +   +           
Sbjct: 68  EEGKAVRAGEVIFILNRETQTKYGATSHEMTTALKAQKTAIEREITLTS----------- 116

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
                                     +        L R+++    +  +++  +  R   
Sbjct: 117 -------------------------EAAETERNFLLQRLKNKSAEQQKMDDLIAKSRQQT 151

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +   +     K L  +    + +   +    Y + ++   +  E+  +         +  
Sbjct: 152 AWLLEKAEHFKTLVRQGIALETEYMARHSEYYHAAVQFETHQREKVKLQGET----LDIK 207

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              A    E+    E+ +R  A     L   E+ RE   I +PI G +      +  N  
Sbjct: 208 ARVAVIHNEVETSRERLRRQAAKFDQDLVSTEEQRELY-ITAPIDGVLTGIMGLT-GNNI 265

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           + +Q L  +VP S    +      + I  +++G    +RF  Y      ++   +  I  
Sbjct: 266 RAAQELASVVPTSGRAEVEIFAAAESIGELREGQAVRLRFDAYPYQWFGQYDGTVTSIST 325

Query: 373 IISQQDNNLQT----------QEYYEVILKITDLA--FSDNNIELRNGFPAEVLFTAKNT 420
                D++ +             Y+++ +   +     +     LR G   E     +  
Sbjct: 326 TAISSDSDERGLATERADQPPLRYFQIRISPQNNTVLLAGKTYPLRPGIGVETDIFIRKR 385

Query: 421 TLAQEIIHPI 430
            L + ++ P+
Sbjct: 386 PLYEWLLLPL 395


>gi|161525129|ref|YP_001580141.1| secretion protein HlyD family protein [Burkholderia multivorans
           ATCC 17616]
 gi|160342558|gb|ABX15644.1| secretion protein HlyD family protein [Burkholderia multivorans
           ATCC 17616]
          Length = 458

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 56/401 (13%), Positives = 133/401 (33%), Gaps = 55/401 (13%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            + +G ++ +  +V++ +  SGI+ +  V+ G ++ +G  L T                 
Sbjct: 92  TTVAGVVMPDAGLVKVYALQSGIVVERNVKEGQRVTRGQTLYTVST-------------- 137

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                D+   A  + +  L+D   +  ++     +   S     
Sbjct: 138 ---------------------DLQSAAQGATQAALIDQARQRKASLLSEIDKTRSLQQDE 176

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                 ++ ++      ++++ +  R   S         ++L  ++ +S++   Q+E  +
Sbjct: 177 RDTVRAKIANLKGELARIDDQLAAQRLRTSIAADGAQRYRHLLAQDYISKDQAQQREADL 236

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                +L   + E+ + L+ +     EAN   A    +   +L Q  R   D    L   
Sbjct: 237 LDQQSKLNGLLRERASTLQSLT----EANNALAGLALKQQNELAQIDRNVIDVDRTLIES 292

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E  R +  + +P  G ++             S+PL  +VP          V    I  V+
Sbjct: 293 EAKR-RIVVTAPETG-VLTATIADVGQAVDTSRPLASVVPDGARWQAHLFVPSAAIGFVR 350

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPII------------SQQDNNLQTQEYYEVIL 391
            G    +R+  +   +  +++A +  I                +    + +   YY V +
Sbjct: 351 VGEPVLIRYQAFPYQKFGQYRATVVSIARTALSAAELANDGGPAAVPGDGKDATYYRVSV 410

Query: 392 KITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +             L+ G   +     +   L + ++ P+
Sbjct: 411 ALDAQHVRAYGAPQPLQAGMALQADILQERRRLYEWVLEPL 451


>gi|51594449|ref|YP_068640.1| HlyD family (ABC transporter associated) multidrug efflux pump
           [Yersinia pseudotuberculosis IP 32953]
 gi|108809437|ref|YP_653353.1| hypothetical protein YPA_3446 [Yersinia pestis Antiqua]
 gi|108813913|ref|YP_649680.1| hypothetical protein YPN_3753 [Yersinia pestis Nepal516]
 gi|145601049|ref|YP_001165125.1| hypothetical protein YPDSF_3807 [Yersinia pestis Pestoides F]
 gi|153949160|ref|YP_001399106.1| MFP family transporter [Yersinia pseudotuberculosis IP 31758]
 gi|162420638|ref|YP_001604742.1| MFP family transporter [Yersinia pestis Angola]
 gi|165928399|ref|ZP_02224231.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165936203|ref|ZP_02224772.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166011486|ref|ZP_02232384.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213729|ref|ZP_02239764.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167398568|ref|ZP_02304092.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167418720|ref|ZP_02310473.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167425991|ref|ZP_02317744.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167468549|ref|ZP_02333253.1| putative secretion permease [Yersinia pestis FV-1]
 gi|170026316|ref|YP_001722821.1| secretion protein HlyD family protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186893438|ref|YP_001870550.1| secretion protein HlyD family protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|229904442|ref|ZP_04519553.1| putative secretion permease [Yersinia pestis Nepal516]
 gi|270488698|ref|ZP_06205772.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Yersinia pestis KIM D27]
 gi|294502197|ref|YP_003566259.1| hypothetical protein YPZ3_0087 [Yersinia pestis Z176003]
 gi|51587731|emb|CAH19331.1| HlyD family (ABC transporter associated) multidrug efflux pump
           [Yersinia pseudotuberculosis IP 32953]
 gi|108777561|gb|ABG20080.1| hypothetical protein YPN_3753 [Yersinia pestis Nepal516]
 gi|108781350|gb|ABG15408.1| hypothetical protein YPA_3446 [Yersinia pestis Antiqua]
 gi|145212745|gb|ABP42152.1| hypothetical protein YPDSF_3807 [Yersinia pestis Pestoides F]
 gi|152960655|gb|ABS48116.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pseudotuberculosis IP 31758]
 gi|162353453|gb|ABX87401.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis Angola]
 gi|165915817|gb|EDR34425.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165919581|gb|EDR36914.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165989632|gb|EDR41933.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205131|gb|EDR49611.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166962714|gb|EDR58735.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167051072|gb|EDR62480.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167055139|gb|EDR64938.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169752850|gb|ACA70368.1| secretion protein HlyD family protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186696464|gb|ACC87093.1| secretion protein HlyD family protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|229678560|gb|EEO74665.1| putative secretion permease [Yersinia pestis Nepal516]
 gi|262360276|gb|ACY56997.1| hypothetical protein YPD4_0088 [Yersinia pestis D106004]
 gi|262364223|gb|ACY60780.1| hypothetical protein YPD8_0090 [Yersinia pestis D182038]
 gi|270337202|gb|EFA47979.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Yersinia pestis KIM D27]
 gi|294352656|gb|ADE62997.1| hypothetical protein YPZ3_0087 [Yersinia pestis Z176003]
          Length = 430

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 72/435 (16%), Positives = 151/435 (34%), Gaps = 64/435 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +  +  + ++ +I LI +         ++ +GE++++ + + I SP  G I K  VE 
Sbjct: 32  TFIAALCAIFLVLLITLIIYGTYTR---RINVNGEVISQPHPINIFSPQQGFITKKWVEV 88

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L   +   TT   ++   S++ +   +    S    +NN     E    + 
Sbjct: 89  GDIVRKGQHLYQIDVSRTTFSGNVSLNSLEAINNQLSQIDS---IINNTQKNKELTLLNL 145

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            +QL  +   +  +   V N G                                   +  
Sbjct: 146 RQQLAQYQKAHKKSQELVDNAG---------------------------------KGMDD 172

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++ +        +  ++++ L  Q  + Y+     +    +       I +L  E +  
Sbjct: 173 MRRTMASYGTYQRQGLITKDQLTNQRSLFYQQQNAFQSLNTQLIQESLQIAKLESEISTR 232

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            +++  +IS+ L Q      D   +L  +        I SP  G I      +       
Sbjct: 233 ASDFDNDISQYLFQK----GDLKRQLAEV-DASGMLLINSPSDGKIENMSV-TQGQMVNV 286

Query: 315 SQPLMKIVPHSKL---TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +  L+++ P         +   V    + ++  G    +R+  +   +  +F   I  I 
Sbjct: 287 NDSLVQLTPSDNPYYCLVL--WVPNNSVPYINTGDKVNIRYDAFPFEKFGQFPGRIISIS 344

Query: 372 PI-ISQQD-----------NNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTA 417
            + +SQQ+           N    + YY+VI+ + D+ F      + L NG  A V    
Sbjct: 345 NVPVSQQEIASYNIAPRLPNGGLIEPYYKVIVALDDIHFRYQSKPLMLSNGLKANVTLFL 404

Query: 418 KNTTLAQEIIHPITD 432
           +   L Q ++ P  D
Sbjct: 405 EKRPLYQWMLSPFYD 419


>gi|22124205|ref|NP_667628.1| hypothetical protein y0287 [Yersinia pestis KIM 10]
 gi|45439964|ref|NP_991503.1| hypothetical protein YP_0101 [Yersinia pestis biovar Microtus str.
           91001]
 gi|229836211|ref|ZP_04456379.1| putative secretion permease [Yersinia pestis Pestoides A]
 gi|229839950|ref|ZP_04460109.1| putative secretion permease [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842032|ref|ZP_04462187.1| putative secretion permease [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|21956966|gb|AAM83879.1|AE013628_2 putative secretion permease [Yersinia pestis KIM 10]
 gi|45434819|gb|AAS60380.1| putative secretion permease [Yersinia pestis biovar Microtus str.
           91001]
 gi|229690342|gb|EEO82396.1| putative secretion permease [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229696316|gb|EEO86363.1| putative secretion permease [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229706659|gb|EEO92665.1| putative secretion permease [Yersinia pestis Pestoides A]
 gi|320013450|gb|ADV97021.1| putative secretion permease [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 438

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 72/435 (16%), Positives = 151/435 (34%), Gaps = 64/435 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +  +  + ++ +I LI +         ++ +GE++++ + + I SP  G I K  VE 
Sbjct: 40  TFIAALCAIFLVLLITLIIYGTYTR---RINVNGEVISQPHPINIFSPQQGFITKKWVEV 96

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L   +   TT   ++   S++ +   +    S    +NN     E    + 
Sbjct: 97  GDIVRKGQHLYQIDVSRTTFSGNVSLNSLEAINNQLSQIDS---IINNTQKNKELTLLNL 153

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            +QL  +   +  +   V N G                                   +  
Sbjct: 154 RQQLAQYQKAHKKSQELVDNAG---------------------------------KGMDD 180

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++ +        +  ++++ L  Q  + Y+     +    +       I +L  E +  
Sbjct: 181 MRRTMASYGTYQRQGLITKDQLTNQRSLFYQQQNAFQSLNTQLIQESLQIAKLESEISTR 240

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            +++  +IS+ L Q      D   +L  +        I SP  G I      +       
Sbjct: 241 ASDFDNDISQYLFQK----GDLKRQLAEV-DASGMLLINSPSDGKIENMSV-TQGQMVNV 294

Query: 315 SQPLMKIVPHSKL---TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +  L+++ P         +   V    + ++  G    +R+  +   +  +F   I  I 
Sbjct: 295 NDSLVQLTPSDNPYYCLVL--WVPNNSVPYINTGDKVNIRYDAFPFEKFGQFPGRIISIS 352

Query: 372 PI-ISQQD-----------NNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTA 417
            + +SQQ+           N    + YY+VI+ + D+ F      + L NG  A V    
Sbjct: 353 NVPVSQQEIASYNIAPRLPNGGLIEPYYKVIVALDDIHFRYQSKPLMLSNGLKANVTLFL 412

Query: 418 KNTTLAQEIIHPITD 432
           +   L Q ++ P  D
Sbjct: 413 EKRPLYQWMLSPFYD 427


>gi|212637549|ref|YP_002314074.1| Toxin secretion, membrane fusion protein [Shewanella piezotolerans
           WP3]
 gi|212559033|gb|ACJ31487.1| Toxin secretion, membrane fusion protein [Shewanella piezotolerans
           WP3]
          Length = 353

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 54/389 (13%), Positives = 125/389 (32%), Gaps = 53/389 (13%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            +  ++++ SP +G+IK   V  G  + QG P+L  E ++                    
Sbjct: 3   PDSGLLKLTSPQAGVIKTLLVAEGQHVEQGEPILRVESLKHGAN---------------- 46

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                              FE    ++  +  + +    ++ N   S     ++      
Sbjct: 47  ------------------GFELNHSRISQYQFQINMLNLQI-NKQHSQNTLQIQELTHSK 87

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ---ERIVYKSTL 228
            SI     +LE ++ ++   +  +      M  L ++   S+ DLN+Q      + + + 
Sbjct: 88  TSITAKLKELERQNKIINQRIEINNNVSEQMATLAKQGYTSKLDLNRQIDTSLTIEQQSS 147

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             +       N L  I+    +  +E A  L ++   L + Q   A    +         
Sbjct: 148 STQSQKLTLTNELNQISNQLSQLPIEHAKILDQLQNQLTEVQLNLAIVKQESLA------ 201

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              + +P++G++    +          Q L+ ++P +        +       ++ G   
Sbjct: 202 --ELRAPMSGSVTGILT-KVGKSVNAQQFLLSVLPENSKMQAVLFIPTSAFGFIEIGQQV 258

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----EYYEVILKITDLAFS--DNN 402
            +R+  +   +   F   I ++   +   +            Y V++ + D A       
Sbjct: 259 RLRYHAFPYEKFGIFDGEIIEVSANVILPEETELPGVIQTPSYRVVVSLADQAILAYGKE 318

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             LR     +     +  +L   +  PI 
Sbjct: 319 TPLRADMMLDADIIVEQRSLLAWLFDPIF 347


>gi|206563173|ref|YP_002233936.1| putative secretion protein [Burkholderia cenocepacia J2315]
 gi|198039213|emb|CAR55177.1| putative secretion protein [Burkholderia cenocepacia J2315]
          Length = 431

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 49/439 (11%), Positives = 148/439 (33%), Gaps = 55/439 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVS--SSGEILNEDNVVEIKSPFSGIIKK 69
           + P S++    LS+      +T   L+ +  + +   SG +     ++ + +P    +++
Sbjct: 32  DVPVSMRFFCYLSLAMFAMFVT--ALVELSYANTESVSGMLTPRSGLIGVGAPPGWAVRE 89

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V     +  G  LL    +        +  +++ +R  +D ++  +            
Sbjct: 90  VYVGKDQHVKAGQRLL---AVTRDTSFVSQANNVQGMRAALDRQRIEV------------ 134

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                               ++  +        S++    ++ +   +R  ++ +    +
Sbjct: 135 --------------------TQQIDAARLEYRSSVQQINQQIAAQGESRGLVDRQIQDQK 174

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            ++  + +    +K L ++  V+    NQ      ++    ++ +  +  + ++  +L  
Sbjct: 175 RIVDEYGERRARVKQLLDEQVVTLEQYNQVNTQYLQAGQAYQDLLLRRAELAKNAMKLRG 234

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           + +   + Y    + +L+  Q     +   +         + + +P  G IV        
Sbjct: 235 DLDTMQSKYDG-ANAELKIKQEELNAKEYNI----DENVNQVLYAPADGQIVRLDVV-QG 288

Query: 310 NYA-QQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                    +++I+P           +   +   VKKG    V +  Y   +   ++  +
Sbjct: 289 GVIDPPGTRVVEILPAKADGLIAEVYIPSSKAGFVKKGQAVKVAYASYPVEKFGTYRGKV 348

Query: 368 EKIDPIISQQ------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKN 419
             I P+           +    Q Y++  +++ +   +F    + LR G   +     + 
Sbjct: 349 LSISPVAFSAKELNLPGDAAAPQTYFKTWVELAERTPSFDGRPLSLRAGMMLKADIVLER 408

Query: 420 TTLAQEIIHPITDNWPKIF 438
            +L + +  P+     ++F
Sbjct: 409 RSLLEWLFEPLYRIRQRLF 427


>gi|329889892|ref|ZP_08268235.1| hlyD family secretion protein [Brevundimonas diminuta ATCC 11568]
 gi|328845193|gb|EGF94757.1| hlyD family secretion protein [Brevundimonas diminuta ATCC 11568]
          Length = 414

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 74/439 (16%), Positives = 148/439 (33%), Gaps = 49/439 (11%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           +W  ++   P SL   T++  +    L T  I        +  G ++ E  VV++++  S
Sbjct: 16  LWGEVRLAQPPSLTIWTVVLTLLCAVLATTLIFGRYTRKETVPGFLIPEAGVVQVRTVQS 75

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V +G  + +G PL+ F     +                   +   LD    + 
Sbjct: 76  GRIARVLVRDGQAVAEGAPLIEFTSDIAS-----------------IGQGPMLDVQLAET 118

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E + ESR   +                 G +   R L  ++   R    +R  LE++
Sbjct: 119 GHQEASLESRRAAVA---------------QGYADDRRRLADQVAAHR---RSRAILESQ 160

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             +    L+  + D   +  L  +    +  ++ + R V    L     + +  + L  +
Sbjct: 161 RRVQVEALALSEADAERLSQLQARGYAPRAQVDARRRTVLAERLA----VADIDSRLSEL 216

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +    +   + A      + DL    R  +    +   LE  R    + +P+AGTI  + 
Sbjct: 217 DRAAADLQGQMAAIPAREAEDLAAIARDRSSLAQRRAELEVARGH-VLRAPVAGTI--SA 273

Query: 305 SFSSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             +        + PL+ I P       R  V  +    ++ G  A ++   +   R    
Sbjct: 274 VQARVGMLPSGEVPLLSIAPEGSPLEARLLVPTRAAGFLEVGQVARLQVEAFPFQRFGFV 333

Query: 364 KAIIEKIDPIISQQDNN----LQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTA 417
           +  I +I   +++         QT   YEV + +     +       L+ G         
Sbjct: 334 EGRIVEIARTVTRPGEAAFLIEQTAPVYEVRVSLERDYVTAYGERRALQPGMGLRADIPI 393

Query: 418 KNTTLAQEIIHPITDNWPK 436
               L Q++  P+     +
Sbjct: 394 DRRRLWQQLFDPLLAAAKR 412


>gi|294664256|ref|ZP_06729628.1| secretion protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292605966|gb|EFF49245.1| secretion protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 432

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 57/432 (13%), Positives = 139/432 (32%), Gaps = 50/432 (11%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +LK   P+S++       +  + L T+ +          SG+I++    V+I+S   G+I
Sbjct: 30  DLKDAFPSSIRIWIGCGCVLFLLLATFVLTASYSKREHVSGQIISTHGRVDIRSGTPGLI 89

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               ++  + + +G  L       T                  +  +S  D    +    
Sbjct: 90  LSTTLKPNALVKKGQVLAELSADTTD-----------------EAGRSLSDETIKRALTR 132

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +     + Q  +F G+     ++       ++                   +   K S+
Sbjct: 133 SEELTKEQLQTHEFSGQRERELTRQVEETSGALQ------------------EAARKISI 174

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L    + +++ L  ++ L  +  VS+      E  +  +  ++++   +Q  +      L
Sbjct: 175 LEKKYAKNKELLKTIEPLLAEKYVSKYTYLTYENALLDAEAQIQDARAQQSTLRNQRAAL 234

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E   E        + ++E+ + T  D++++     K+   +TI SP++GT+    + S
Sbjct: 235 LGEI-TEIKTTASRQASEIEREKSTIEDQVAR----AKSDRLQTITSPLSGTVAAIYA-S 288

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                     +  I P   +      +  + I HV  G    +    +   +    +  I
Sbjct: 289 QGQRIGTDSIIASITPSESVFEAEILIPSRAIGHVTVGTEVLLNIAAFPKAKYGAIQGRI 348

Query: 368 EKIDPIISQQ-------DNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAK 418
             +    S              T+  Y   + +    +  +        G   +     +
Sbjct: 349 ASLSTQTSPLGELERRYGRQSPTEPVYTAKVALPYQTIGVAQEAKSFLPGMEVDAELILE 408

Query: 419 NTTLAQEIIHPI 430
              + + +  P 
Sbjct: 409 GRKIWEWMFDPF 420


>gi|59800583|ref|YP_207295.1| putative secretion protein [Neisseria gonorrhoeae FA 1090]
 gi|268600639|ref|ZP_06134806.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|293397678|ref|ZP_06641884.1| secretion protein [Neisseria gonorrhoeae F62]
 gi|59717478|gb|AAW88883.1| putative secretion protein [Neisseria gonorrhoeae FA 1090]
 gi|268584770|gb|EEZ49446.1| conserved hypothetical protein [Neisseria gonorrhoeae PID18]
 gi|291611624|gb|EFF40693.1| secretion protein [Neisseria gonorrhoeae F62]
          Length = 424

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 137/438 (31%), Gaps = 55/438 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S    T  + I  + +I + I        +  G+IL    V+ + +P +G I    
Sbjct: 28  TRPLSFSLWTTFASISALLIILFLIFGNYTRKTTMEGQILPASGVIRVYAPDTGTITAKF 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE+G ++  G  L             +++         + TE      L           
Sbjct: 88  VEDGEKVKAGDKLFALSTSRFGAGGSVQQ--------QLKTEAVLKKTLA---------- 129

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               EQ L  L   H   ++     +  +                 +L +  +    +  
Sbjct: 130 ----EQELGRLKLIHENETRSLKATVERLENQ--------------KLHISQQIDGQKRR 171

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   ++ L   + L   +AVS+ ++   E  + +   +L     E+  +L+ I       
Sbjct: 172 IRLAEEMLRKYRFLSANDAVSKQEMMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ---- 227

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           NL  A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +      
Sbjct: 228 NLTLASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQ 285

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S+ L+ IVP     Y    +       +K      +R+  Y   +       +  + 
Sbjct: 286 VDPSKLLLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVA 345

Query: 372 PIISQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                +                 +  Y V +K      +       L+ G   E     +
Sbjct: 346 KTALGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHE 405

Query: 419 NTTLAQEIIHPITDNWPK 436
              L + ++ PI     +
Sbjct: 406 KRRLYEWVLEPIYSMSGR 423


>gi|270261743|ref|ZP_06190016.1| secretion protein HlyD family protein [Serratia odorifera 4Rx13]
 gi|270045227|gb|EFA18318.1| secretion protein HlyD family protein [Serratia odorifera 4Rx13]
          Length = 422

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 54/425 (12%), Positives = 129/425 (30%), Gaps = 51/425 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           SL      S   ++ ++ + +L          G ++    ++++ +  +G + +  V  G
Sbjct: 32  SLTAYAWASGALVLAILLFLMLGEYTRKARLEGVVMPSSGLIKVVARNAGQVTERLVAEG 91

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           + +  G PL                 S+                          A   ++
Sbjct: 92  AAVKAGQPLYRLSGEHFNGKGVGALASVA-------------------------ASLDQQ 126

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            ++L+   +     S +   G+      L  +LT   S  +          L +   +  
Sbjct: 127 YRMLEHQREQEQVTSALRQTGVRQRIAQLDDELTSAGSALV----------LAQQQETLS 176

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              +   + L  K  VS+ +  Q++  +  +    RE +  Q+     +   +  A  E 
Sbjct: 177 HSVMARYRKLIAKGYVSEIEFQQKQMELSTA----REKVESQRQAQLRLKREWAAAGSEL 232

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
               ++      + +R       +   L   RE  T+ +P+ G I    + +     + +
Sbjct: 233 QTLQQQQQGRDAELERQLQSIDQQKIELNAQRE-TTLTAPVDGHIAVVLARA-GQTVKPN 290

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            PL+ +V       +      K +  +K      +RF  +   +          I     
Sbjct: 291 DPLLMMVADGAQLQVELFAPSKAVGFIKPSQRVGLRFASFPYEKFGVQYGSTRAITHASL 350

Query: 376 QQDNNLQTQE--------YYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQE 425
              + +            +Y V++ +     +       LR G          +  L + 
Sbjct: 351 SAGDAMLQNPLVWKENEGHYRVVVALDKTTITAYGRQEPLRVGMAVSADIELDSRRLYEW 410

Query: 426 IIHPI 430
           ++ P+
Sbjct: 411 LLEPL 415


>gi|261493717|ref|ZP_05990235.1| secretion permease [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261310607|gb|EEY11792.1| secretion permease [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 419

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 65/426 (15%), Positives = 149/426 (34%), Gaps = 62/426 (14%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           ++       I  I +      E  V   GE++ + + + + +P SG I +  ++   Q+ 
Sbjct: 32  ISFFIFTAFILFIVFGNYTRRETVV---GELVMQSHPILLSAPKSGYISESYIQPHQQVK 88

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G PL        T   ++   SI +L+  I   + A+  LN                  
Sbjct: 89  KGEPLFKITLDRITHSGNINVNSILSLKSQIQATEQAITALN------------------ 130

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                              +   S+     ++++      D +     +   ++ ++  +
Sbjct: 131 ------------------KNKLESINSLENQIKNNQKIYQDKQAYLVEVEKTMNDYEDLV 172

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              + L +    S +++N Q+   ++     +   +E K  L  +         E     
Sbjct: 173 NRYEKLLKVGHSSYDEVNIQKSRYFQQ----KSLFNELKQELIQLKSTQLSLENEIETRK 228

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E +  + + +   +D   +L   E +     + + + G I  + S +     +++ PL 
Sbjct: 229 TEFNNQIIRYEMQKSDLNIRLMEFE-SVSDIIVNASLDGKI-ESTSVTVGQIIKENDPLA 286

Query: 320 KIVPHSK---LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           +I+P +K      +   V    I  +K+G    +R+  +   +  +FK  I  I  + + 
Sbjct: 287 QILPQNKGNYQLVM--WVPNSAISFIKQGDEVNIRYEAFPFEKFGQFKGKITSISTLPAS 344

Query: 377 ----------QDNNLQTQEYYEVILKITDLAFSDNNIELR--NGFPAEVLFTAKNTTLAQ 424
                       N  Q    Y++++++ D     N+  L   +G  AE     +   L +
Sbjct: 345 LQELSFYKNLPTNLDQGIPLYKILIELADQNVKYNDTTLYFMSGMKAEATLFLEKRKLYE 404

Query: 425 EIIHPI 430
            I  P+
Sbjct: 405 WIFFPM 410


>gi|268598288|ref|ZP_06132455.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
 gi|268582419|gb|EEZ47095.1| conserved hypothetical protein [Neisseria gonorrhoeae MS11]
          Length = 424

 Score =  120 bits (300), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 137/438 (31%), Gaps = 55/438 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S    T  + I  + +I + I        +  G+IL    V+ + +P +G I    
Sbjct: 28  TRPLSFSLWTTFASISALLIILFLIFGNYTRKTTVEGQILPASGVIRVYAPDTGTITAKF 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE+G ++  G  L             +++         + TE      L           
Sbjct: 88  VEDGEKVKAGDKLFALSTSRFGAGGSVQQ--------QLKTEAVLKKTLA---------- 129

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               EQ L  L   H   ++     +  +                 +L +  +    +  
Sbjct: 130 ----EQELGRLKLIHENETRSLKATVERLENQ--------------KLHILQQIDGQKRR 171

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   ++ L   + L   +AVS+ ++   E  + +   +L     E+  +L+ I       
Sbjct: 172 IRLAEEMLRKYRFLSANDAVSKQEMMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ---- 227

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           NL  A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +      
Sbjct: 228 NLTLASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQ 285

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S+ L+ IVP     Y    +       +K      +R+  Y   +       +  + 
Sbjct: 286 VDPSKLLLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVA 345

Query: 372 PIISQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                +                 +  Y V +K      +       L+ G   E     +
Sbjct: 346 KTALGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHE 405

Query: 419 NTTLAQEIIHPITDNWPK 436
              L + ++ PI     +
Sbjct: 406 KRRLYEWVLEPIYSMSGR 423


>gi|17233314|ref|NP_490404.1| hypothetical protein alr7298 [Nostoc sp. PCC 7120]
 gi|17135836|dbj|BAB78382.1| alr7298 [Nostoc sp. PCC 7120]
          Length = 482

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 57/372 (15%), Positives = 131/372 (35%), Gaps = 23/372 (6%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L+I G++G + WS+   I I+V+  G ++N   VV+ +SP SG ++   V++G  + +  
Sbjct: 41  LAIFGVLG-VLWSVFGNIPITVTGKGVLINPRRVVQFQSPISGQVRSLNVKDGQCVAKDD 99

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L T +  +    +  ++  +  L+  +   +        +  +  +A  +    L   L
Sbjct: 100 ILATIDPSQQKQQLQQQRDKLAQLQRQV---QKTTLLRQQQTQLETEAIAAERTSLKQRL 156

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY----------LNRLDLENKSSLLRALL 192
                   ++ + G++S+ +       R++ +             + +L+ + ++    +
Sbjct: 157 QNTQKLAPRLQDEGLNSIDQQRLSLQERLKDVEELTPVLQKRVEKQRELQKQGAISEEQV 216

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              +++    +    K       L  QE    +  LE + NI +    L  +N    +  
Sbjct: 217 LQAEQEYRQTRQNISKIKAQLQQLRVQETEQQQKYLENKNNITQINAELEKLNTRSKQLE 276

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                     +  +++ Q+  A         ++  +  TI S  AG IV   + +   Y 
Sbjct: 277 QNNLAADNTENNQIQELQQAIA------RWEKEVADNSTIKSSHAGCIVEITA-TLGQYL 329

Query: 313 QQSQPL--MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                L  ++I   +      A    +  + +K G    +        R       I  I
Sbjct: 330 SPGNRLGTLQISGQASEMMSVAYFRVQDGKQIKPGMPILITPDTVKRARFGGIVGKITNI 389

Query: 371 DPIISQQDNNLQ 382
                  +    
Sbjct: 390 SAFPVTSEGASS 401


>gi|268683590|ref|ZP_06150452.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
 gi|268623874|gb|EEZ56274.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-92-679]
          Length = 424

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 137/438 (31%), Gaps = 55/438 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S    T  + I  + +I + I        +  G+IL    V+ + +P +G I    
Sbjct: 28  TRPLSFSLWTTFASISALLIILFLIFGNYTRKTTMEGQILPASGVIRVYAPDTGTITAKF 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE+G ++  G  L             +++         + TE      L           
Sbjct: 88  VEDGEKVKAGDKLFALSTSRFGAGGSVQQ--------QLKTEAVLKKTLA---------- 129

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               EQ L  L   H   ++     +  +                 +L +  +    +  
Sbjct: 130 ----EQELGRLKLIHENETRSLKATVERLENQ--------------KLHISQQIDGQKRR 171

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   ++ L   + L   +AVS+ ++   E  + +   +L     E+  +L+ I       
Sbjct: 172 IRLAEEMLRKYRFLSANDAVSKQEMMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ---- 227

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           NL  A++ K    +  Q +RT AD   ++   E  R ++ I +  +G I    +      
Sbjct: 228 NLTLASFPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQ 285

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S+  + IVP     Y    +       +K      +R+  Y   +       +  + 
Sbjct: 286 VDPSKLFLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVA 345

Query: 372 PIISQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                +                 +  Y V +K      +       L+ G   E     +
Sbjct: 346 KTALGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHE 405

Query: 419 NTTLAQEIIHPITDNWPK 436
              L + ++ PI     +
Sbjct: 406 KRRLYEWVLEPIYSMSGR 423


>gi|284052494|ref|ZP_06382704.1| chromosome segregation ATPase-like protein [Arthrospira platensis
           str. Paraca]
 gi|291568774|dbj|BAI91046.1| HlyD family secretion protein [Arthrospira platensis NIES-39]
          Length = 625

 Score =  119 bits (299), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 79/609 (12%), Positives = 174/609 (28%), Gaps = 192/609 (31%)

Query: 14  PASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P  L  + L  I+ +    + W+    IE +V + G++       EI++P +G + +  V
Sbjct: 16  PGLLSHLFLWMIMLVSTTSVIWAYFANIEQTVPAMGQLALTSGAREIQAPTTGAVVRLHV 75

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL------NNKYDV 126
           ENG ++ +  P+LTF     +  +     ++++LR  ++ E    + +       N    
Sbjct: 76  ENGDRVERNQPILTFSPTNPSADLR----AVESLRAALEKENEFYESIVNNQITTNLPPQ 131

Query: 127 LEKAFESREEQL-----------------------------------LDFLGKYHSTCSK 151
           L      RE ++                                    ++  +  +   +
Sbjct: 132 LADLVRDREARIQENQTLQSLVDELYHDRGTAVSFSPNMAGLVANYRAEYQSRVAAGELR 191

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYL--------NRLDLE-NKSSLLRALLSSHQKDLTMM 202
           +      S+     +   R +  Y+         +L+L  N+ S    LLS ++  L  +
Sbjct: 192 IQELEKQSIQNQDTLAAARQQLRYIENQLTYSEQQLNLAGNQLSKSEELLSVNESILAQI 251

Query: 203 KNLFEKNAVS----------------------------QNDLNQQERIVYKSTLELRENI 234
             L E+ A+S                            Q ++NQ+ R + +   E+    
Sbjct: 252 SPLVEQGAMSDLQRKQQEQDILRNQNEVLRQQDQIQQRQGEINQRRRDIEQQRAEIERLQ 311

Query: 235 HEQKNMLRHINELYDEANL------------------EFANYLKEISRDLEQNQRTFADE 276
           +E++ +   I     E                     + A+   ++SR    N++  +D 
Sbjct: 312 NEEQRIQTSIARTRQELQNTKDSWARDIYSRIQENHKQIASADSQLSRLRLDNEKRISDI 371

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFS-----------------SSNYAQQS---- 315
            S++  L++ R  + + +P +G I   Q  +                  ++  +      
Sbjct: 372 KSQIEKLQEQRNTQVLRAPASGIIFELQPSTKSNAALDMNQDEICSYVINSILRPGDPMP 431

Query: 316 -------------QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT--------------- 347
                        QPL+ I+   +       +    +  V                    
Sbjct: 432 SRCDEAYFEAQQTQPLLTILDDDEGLKAEVHINNSDMALVLNALRVKRELLTPFDGKEVA 491

Query: 348 ---------------------------------ATVRFPHYADIREKKFKAIIEKIDPII 374
                                              V    +           +  I    
Sbjct: 492 GEVIECQVEKDCICPTSAAAREQIGIADEQCIGVEVNIDAFPSNEFGTVPGELIWISQNA 551

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNN--------IELRNGFPAEVLFTAKNTTLAQEI 426
              +       +    +K+    F  N         I+L++G            T+ Q +
Sbjct: 552 IPPEEGRPFFSF-RANIKLERQYFMLNEDVPGQEVTIKLQSGMAVNTKVNIGKRTVLQML 610

Query: 427 IHPITDNWP 435
              +T  + 
Sbjct: 611 FSRLTGKFE 619


>gi|153847071|ref|ZP_01993911.1| secretion protein, HlyD family [Vibrio parahaemolyticus AQ3810]
 gi|149744755|gb|EDM56223.1| secretion protein, HlyD family [Vibrio parahaemolyticus AQ3810]
          Length = 157

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 62/157 (39%), Gaps = 2/157 (1%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N P S + M  + ++  +  I W+    I+      G+++    +  +++   G++K+  
Sbjct: 1   NTPNSARLMLWVMVLFFVAAIGWASWAQIDQVTVGQGKVIPSSQIQVVQNLEGGLVKEIL 60

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +G  LL  +D         ++  + NL   +    ++++ +    D   + +
Sbjct: 61  VKEGQLVKKGQQLLLIDDTRFRSDYREREQQVANLTASVLQLSASINSVAVNRDFNIQDW 120

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           E     +LD+         +     ++   ++    L
Sbjct: 121 EKSV--VLDYGKLTFPPVLEETQPQLTQRQKAEYAHL 155


>gi|91776574|ref|YP_546330.1| secretion protein HlyD [Methylobacillus flagellatus KT]
 gi|91710561|gb|ABE50489.1| secretion protein HlyD [Methylobacillus flagellatus KT]
          Length = 433

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 59/377 (15%), Positives = 132/377 (35%), Gaps = 47/377 (12%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKK 69
            P  +KR+ L  ++    + T  + LP + +V + G +      +    + +P  G+I++
Sbjct: 17  TPRLVKRILLWVVVSCFIVPTLILFLPWQQNVQAMGAVTAFAPLERRQSVDAPVGGVIRQ 76

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
           + V  GS++  G PLL   D++     +      + +   +  ++  L     +   L+ 
Sbjct: 77  WFVREGSRVNAGDPLLEISDVDPR-FKERLAAQRQTVAAKLKAKQDELQAYEVQ---LQN 132

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               R+ ++       +    KV   G                             +  +
Sbjct: 133 LLAVRQARIAAVDYGLNVAQQKVVAAG--------------------------ESVASAQ 166

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY---KSTLELRENIHEQKNMLRHINE 246
           A L +    ++ M+ L ++  VS+ D+   ER      ++    +  +   +   +    
Sbjct: 167 ATLDAADFQVSRMQRLVQEGLVSRRDVELAERDRAVALRNVNSAKAALDSARAEEKAATA 226

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT---ILSPIAGTIVYN 303
              +   E    +      + +     AD  ++LT LE +  ++    + +P AGT+   
Sbjct: 227 SQAQVRAETQANIDASRALISKISSEVADTQNELTSLEISLARQESQLVRAPRAGTVFRL 286

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF--------PHY 355
              S S    Q QPL+ I+P ++   +   V       +  G    + F          +
Sbjct: 287 PVNSQSQVISQGQPLLVIIPDTEQRAVELMVKGLDAALILPGSRVRLEFEGWPALQISGW 346

Query: 356 ADIREKKFKAIIEKIDP 372
            ++    F   +  +D 
Sbjct: 347 PNVAIGTFGGKVAFVDA 363


>gi|13235459|emb|CAC33752.1| Alkaline protease secretion protein [Rickettsia typhi]
          Length = 113

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN---NLQTQEYYEVILKI 393
           K I  V +G  A +RF  +       F   +  I P I   +      Q   YY   ++I
Sbjct: 2   KNIDSVHEGLIAKIRFSAFKSRTTPTFTGRVVSISPDIVHDERQHPGYQQDNYYVARVEI 61

Query: 394 TDLAFSD----NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
               F+      N+ L  G  AEV       TL + ++ P+TD   K F 
Sbjct: 62  NMEEFNKVAKVKNLALHPGMQAEVQIVTGTRTLLRYLLDPVTDTAFKAFR 111


>gi|325921072|ref|ZP_08182949.1| multidrug resistance efflux pump [Xanthomonas gardneri ATCC 19865]
 gi|325548460|gb|EGD19437.1| multidrug resistance efflux pump [Xanthomonas gardneri ATCC 19865]
          Length = 432

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/432 (13%), Positives = 141/432 (32%), Gaps = 50/432 (11%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +LK   P+S++       +  + L T+ +          SG+I++    V+I+S   G+I
Sbjct: 30  DLKDAFPSSIRIWIGCGCVLFLLLATFVLTASYSKREHVSGQIISTHGRVDIRSGTPGLI 89

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               ++  + + +G  L       T                  +  +S  D    +    
Sbjct: 90  LSTTLKPNALVKKGQVLAELSADITD-----------------EAGRSLSDETIKRALTR 132

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +     + Q  DF G+     ++                  ++        ++  K S+
Sbjct: 133 SEELTKEQLQTHDFSGQRERELTR------------------QVEETSGAMQEVARKISI 174

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L    + +++ L  ++ L  +  VS+      E  +  +  ++++   +Q  +      L
Sbjct: 175 LEKKYAKNKELLKTIEPLLAEKYVSKYTCLTYENALLDAEAQIQDARAQQSTLRNQRAAL 234

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E   E        + ++E+ + T  D++++     K+   +TI SP++GT+    + S
Sbjct: 235 LGEI-TEIKTTASRQASEIEREKSTIEDQVAR----AKSDRLQTITSPLSGTVAAIYA-S 288

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                     +  I P   +      +  + I HV  G    +    +  ++    +  I
Sbjct: 289 QGQRIGTDSIIASITPSESVFEAEILIPSRAIGHVNVGTEVLLNIAAFPKVKYGAIQGRI 348

Query: 368 EKIDPIISQQ-------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAK 418
             +    S              T+  Y   + +    +  +        G   +     +
Sbjct: 349 ASLSTQTSPIGELERRYGRQSPTEPVYTAKVALPSQTIGVAQEAKSFLPGMEVDAELILE 408

Query: 419 NTTLAQEIIHPI 430
              + + +  P 
Sbjct: 409 GRKIWEWMFDPF 420


>gi|254493034|ref|ZP_05106205.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
 gi|226512074|gb|EEH61419.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
          Length = 424

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 136/438 (31%), Gaps = 55/438 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S    T  + I  + +I + I        +  G+IL    V+ + +P +G I    
Sbjct: 28  TRPLSFSLWTTFASISALLIILFLIFGNYTRKTTVEGQILPASGVIRVYAPDTGTITAKF 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE+G ++  G  L             +++         + TE      L           
Sbjct: 88  VEDGEKVKAGDKLFALSTSRFGAGGSVQQ--------QLKTEAVLKKTLA---------- 129

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               EQ L  L   H   ++     +  +                 +L +  +    +  
Sbjct: 130 ----EQELGRLKLIHENETRSLKATVERLENQ--------------KLHISQQIDGQKRR 171

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   ++ L   + L   +AVS+ +    E  + +   +L     E+  +L+ I       
Sbjct: 172 IRLAEEMLRKYRFLSANDAVSKQETMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ---- 227

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           NL  A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +      
Sbjct: 228 NLTLASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQ 285

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S+ L+ IVP     Y    +       +K      +R+  Y   +       +  + 
Sbjct: 286 VDPSKLLLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVA 345

Query: 372 PIISQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                +                 +  Y V +K      +       L+ G   E     +
Sbjct: 346 KTALGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHE 405

Query: 419 NTTLAQEIIHPITDNWPK 436
              L + ++ PI     +
Sbjct: 406 KRRLYEWVLEPIYSMSGR 423


>gi|153009496|ref|YP_001370711.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151561384|gb|ABS14882.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 431

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 63/441 (14%), Positives = 132/441 (29%), Gaps = 55/441 (12%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            L +     L  +  L+II +I  +   +L      V   G ++    V+ + +P +G +
Sbjct: 26  RLIQPISVQLATVIGLTIISLIVAVL--VLGEYTRRVRVHGAVVPSAGVLHVFAPQAGRL 83

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            + Q  + + +  G PL       TT+L + + V    L+  ID                
Sbjct: 84  LQAQATDAATVEAGDPLFLLGTDTTTNLGETESVVKDQLQSRID---------------- 127

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                                 ++     +       +    R  ++ L    ++ +   
Sbjct: 128 --------------------EIAEAIRQRVRLDEIEKRALAERRGAVKLEIERVDAQIKQ 167

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
               ++  Q      + L +     +      E+   ++  EL       +     +   
Sbjct: 168 TEEYIAVLQPRADKYRRLVDSGITLERSFESAEQNYMQNRQELEA----LRRQRVQLEGT 223

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +       Y    +  L + ++  A    +L   E  R    I +P  GTI      S
Sbjct: 224 AVDLGSRLEGYDASAAIALGEMRQRIATLREQLAQAE-ARRAIVIAAPANGTIAAVLVHS 282

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                    PL+ I+P  +   +      K I  +++G    +R+  +   +  ++   I
Sbjct: 283 -GQLVAAGLPLVSILPTGEAMEVHLLADSKAIGFIREGARVLLRYTAFPYQKFGQYGGSI 341

Query: 368 EKIDPIISQQDN---------NLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFT 416
            K+  +  Q               TQ  Y + ++              LR G   E    
Sbjct: 342 TKVSRVTLQPTETNADALAAQPQPTQAQYRITVQPDQPNVMAYGKAEPLRAGMGVEADLL 401

Query: 417 AKNTTLAQEIIHPITDNWPKI 437
                L Q ++ P+     + 
Sbjct: 402 LDTRPLYQWLLEPLYSLRGRA 422


>gi|330883322|gb|EGH17471.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. glycinea str. race 4]
          Length = 151

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 50/131 (38%), Gaps = 3/131 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +   +   +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQSVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKA 130
           ++   +++   
Sbjct: 128 VHFPAELIAAG 138


>gi|17228695|ref|NP_485243.1| hypothetical protein alr1200 [Nostoc sp. PCC 7120]
 gi|17130547|dbj|BAB73157.1| alr1200 [Nostoc sp. PCC 7120]
          Length = 710

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 122/359 (33%), Gaps = 22/359 (6%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + K  ++ +    ++  K+    L  + +    A E++ EQ             +
Sbjct: 344 ARSFFEEKDQAVISAEARLEQAKANAKNLLEEKEQAVIAAEAKLEQAKANAKNLLEEKEQ 403

Query: 152 VFNYGISSVYRSL----KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                 + + ++      +   + + +      LE   +  + LL   ++++   +   E
Sbjct: 404 AVKSAEAKLEQAKANAKNLLEEKDQGVIAAEAKLEQAKANAKNLLEEKEQEVIAAEAKLE 463

Query: 208 KNAVSQNDLNQ--------QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           +   +  +L +         +  + K+   +  N          I +      +  A   
Sbjct: 464 QAKANAKNLQEEKDQALTVAQTNLAKARTAINPNDANVTVASERIKQEQARGEVTLAALK 523

Query: 260 KEISRDLEQN---QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           KE    L+Q    Q+       +L   E   +Q  + +PIAGT++     +     Q S+
Sbjct: 524 KERETLLQQRLEFQKQLDRNRKELQQAENDLKQSIVRAPIAGTVLQLNLRNPGQVVQPSE 583

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            + +I P +    I+A V  + I  VK G    ++            K  ++ I P    
Sbjct: 584 AIAQIAPLNAPIQIKANVQAQDINKVKPGQQVQMQVSACPYPDYGTLKGTVKTIAPDALP 643

Query: 377 QDNN-----LQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
             NN           YEVI++     +   D   +L+ G   +    ++  T+ + I+ 
Sbjct: 644 VANNNPQTTTAKATAYEVIVEPQTPYVGRGDRQCQLKTGMQGKADIISRRETVLRFILR 702



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/272 (11%), Positives = 86/272 (31%), Gaps = 7/272 (2%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             ++  I I+G++  S+L    ++V     I     +  ++S  +G I K  V     + 
Sbjct: 43  GVVVFSIFIVGVVLTSVL-KYNVTVKVPATIRPVGELRLVQSLINGKILKISVAENQMVA 101

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL----EKAFESRE 135
           +G  +   +D          +  I+  +  ++   + L  ++ +        ++   + +
Sbjct: 102 EGQAIAYIDDSRLQTQKSQLQNLIQQSQLQLNKIDAQLGEIDAQITAQTNLNDRTTIAAQ 161

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L      Y     K       +       ++ + R      L    + +     L+  
Sbjct: 162 AELSGTQRNYADQQVKATADMTQAQSALTLARIQKDRLQREKLLTATVRETEAALQLARV 221

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q D    + L +          +  R         R      +     +N    +A  E 
Sbjct: 222 QSDRLQREKLLKTTVDEAERGLKLAREQRDRLRRDRLLRTTVQETQTALN--LAKAQQER 279

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
               + +++ +++ +        +   L++ R
Sbjct: 280 LQREQLLAKTVQEAETALNLARVQRDRLQQDR 311


>gi|86133592|ref|ZP_01052174.1| HlyD family secretion protein [Polaribacter sp. MED152]
 gi|85820455|gb|EAQ41602.1| HlyD family secretion protein [Polaribacter sp. MED152]
          Length = 452

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 65/392 (16%), Positives = 143/392 (36%), Gaps = 49/392 (12%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQI 78
            L    IIG I   + LP   +++ +G +     E     I+S   G I+++ V  G  +
Sbjct: 36  FLLAAAIIGFIF--LFLPWTQNITGNGIVTTLTPEQRPQTIQSQIPGRIEQWYVREGDYV 93

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  +L   +I++    D     I+     I+ + S++     K   L++  E+ +E+ 
Sbjct: 94  EKGDTILRISEIKSEYFDDKL---IERTNEQINAKTSSVGAYAFKVAALDRQIEALKEE- 149

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                K     +K+    +     S+        +    + +L+   S      +  Q+ 
Sbjct: 150 --QKLKLQQAKNKLLQSKLKVQSDSI--------AFEAAKTNLKIAQSQYNRDFTLQQEG 199

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           +  +K++ EK    +  L   E  + +   +L  +I+E  N    I+      +  +A+ 
Sbjct: 200 IKAVKDVEEK----RLKLQATEAKIIEQENKLLASINEVINARVEIS----RIDASYADK 251

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-------SPIAGTIVYNQSFSSSNY 311
           + +   D    Q +  D  ++++ LE +     +        +P  G I           
Sbjct: 252 ISKAQSDKFTAQSSGFDARAQVSKLENSNSNYKVRNSLLYIQAPQHGFINKALKGGIGVT 311

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR--------FPHYADIREKKF 363
            ++ + ++ I+P      +   + P  +  V  G    V+        F  + +I    +
Sbjct: 312 FKEGEEIVGIMPAQYDLAVETYIRPIDLPLVHIGEEVRVQFDGWPAIVFSGWPNISYGTY 371

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            A +  I+  IS           Y ++L   +
Sbjct: 372 GAKVVAIENFISDNGR-------YRILLAPDE 396


>gi|270264893|ref|ZP_06193157.1| secretion protein HlyD family protein [Serratia odorifera 4Rx13]
 gi|270041191|gb|EFA14291.1| secretion protein HlyD family protein [Serratia odorifera 4Rx13]
          Length = 419

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/426 (11%), Positives = 139/426 (32%), Gaps = 51/426 (11%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     +  +    ++ L+   I        +++G ++ E  ++ I +  SG++    V 
Sbjct: 27  PPFRWLIIAIICTLVLALVALFIFGSYTKRETANGMLVPEGGMMNITAINSGMVIALPVS 86

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +   + T     +T     ++   + L                  D+ ++   +
Sbjct: 87  EGDSLKKNDRIATVSSEISTRYGQTREAIARQL------------------DLQQQGLNN 128

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +   L    G                   +LK    + R +    ++L+         ++
Sbjct: 129 QLLNLEQLNG------------------ETLKSLQEKERLLQQQSVELDTIYRQRTQQIA 170

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              K L  MK +  +   S   + QQE ++  +++ L++   ++ +  + + +   +   
Sbjct: 171 LANKQLGKMKAMRTQGYASNTQVEQQENVLLDASVRLQDVARQRIDARQQLAQTRQQLRE 230

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +   Y +         Q+  +     +   E  R    + +P  G +      +      
Sbjct: 231 QPITYYQ----QKNDIQQKLSHITQSMVENESRRS-VDLRAPEKGMVSAVLVKT-GQIVS 284

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-- 371
             Q +  ++P +     R  ++ + I  +  G    +R+  +   +  +    + +I   
Sbjct: 285 AGQTIALMLPDNAHLQARIMLSSRAIGFIHTGQRVVLRYQSFPWQKFGQQYGTVMEISKS 344

Query: 372 -----PIISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQ 424
                 + +   +N   +  Y+V + I           I L  G   +  F      + +
Sbjct: 345 TLSPQEVSAITGDNQVQEALYQVKVAIDHQTVQAYGKQIGLLPGSGLQADFIVDKRRIYE 404

Query: 425 EIIHPI 430
            ++ P+
Sbjct: 405 WVLEPL 410


>gi|294012105|ref|YP_003545565.1| putative secretion protein [Sphingobium japonicum UT26S]
 gi|292675435|dbj|BAI96953.1| putative secretion protein [Sphingobium japonicum UT26S]
          Length = 123

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 4/103 (3%)

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M+IVP      I A+++ + I  ++ G  ATV+   Y           +++I P   Q +
Sbjct: 1   MEIVPLEDKLLIEARISRRDIAFIRPGLPATVKITAYDPSIYGTLDGTVDRISPDTLQDE 60

Query: 379 NNLQTQEYYEVILKI---TDLAFSDNNIELRNGFPAEVLFTAK 418
            N + Q +Y V ++    +       +  +  G  A V     
Sbjct: 61  VN-RDQVFYRVYVRTRHSSPRTRDGRDHTIMPGMVATVEIRTG 102


>gi|300865188|ref|ZP_07110007.1| secretion protein HlyD [Oscillatoria sp. PCC 6506]
 gi|300336802|emb|CBN55157.1| secretion protein HlyD [Oscillatoria sp. PCC 6506]
          Length = 371

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 102/335 (30%), Gaps = 28/335 (8%)

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              +          V   A      ++         T   +      +V     +     
Sbjct: 39  AAIALASVTKYSSTVRAAAIVRPAGEVRIVQAATEGTLESITVSENQTVKAGDAIAKIDS 98

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
             +   +  L++        L+   K +  ++N       S+   N  + I+ +S     
Sbjct: 99  SRLRSQKNHLQDNIQQCEMELNQINKQVNDLENQIFATLQSKQPPNTTQVIIEESV---- 154

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 ++ L  ++    +   + A   + +S      Q+       +L  +    E   
Sbjct: 155 ------ESALVRLSASIPDIAQQLARDWRTLSVKRSDIQKQIIQGRKELEQIAVKLENSV 208

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P  GTI+  +  +     +    + +IVP      ++A+V  + I  VK      +R
Sbjct: 209 VKAPTDGTILKMELRNPGQMVELGAAIAQIVPSDVPLVVKARVAAQDIGQVKLNQPVQIR 268

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI------------------ 393
              +        K  +  I P      N+   + YYEVI++                   
Sbjct: 269 ISAFPYPDYGTLKGKVSGISPDAIAPQNSSSGEAYYEVIVQPERAYLVRQGSGSSGYFLG 328

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           T  A + +   +++G        A   T+ + ++ 
Sbjct: 329 TQKADAAHQYPIQSGMEGRADIIASQETVLKFVMR 363



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/238 (10%), Positives = 71/238 (29%), Gaps = 10/238 (4%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           +H              +    +  +      I  + +     +V ++  +     V  ++
Sbjct: 10  LHSLQSDEFLPPLSRWMTLGGVFLVGTFGAAIALASVTKYSSTVRAAAIVRPAGEVRIVQ 69

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +   G ++   V     +  G  +   +        +  + +I+     ++     ++ L
Sbjct: 70  AATEGTLESITVSENQTVKAGDAIAKIDSSRLRSQKNHLQDNIQQCEMELNQINKQVNDL 129

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRL 179
            N+          + +Q  +          +     +S+    +  +L R  R++ + R 
Sbjct: 130 ENQI-----FATLQSKQPPNTTQVIIEESVESALVRLSASIPDIAQQLARDWRTLSVKRS 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           D++ +    R  L      L          A +   + + E       +EL   I + 
Sbjct: 185 DIQKQIIQGRKELEQIAVKLENSV----VKAPTDGTILKMELRNPGQMVELGAAIAQI 238


>gi|302871002|ref|YP_003839638.1| secretion protein HlyD family protein [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302573861|gb|ADL41652.1| secretion protein HlyD family protein [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 464

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 72/440 (16%), Positives = 165/440 (37%), Gaps = 41/440 (9%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +T + +  +IGL+ WSI+  I+I+V   G I   ++  ++ S   G +K+  V+ G  + 
Sbjct: 29  ITYILLALVIGLVLWSIVGKIDINVKVQGIIRPWEDEAKVISYVGGKVKEVFVKEGEYVK 88

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV------------- 126
           +G  L   +D E     DL +  +      ID  K   + +     +             
Sbjct: 89  KGDVLFKIDDEEYIKKRDLLRQQLSEYEKKIDDLKELRNSIEKGESLKNKNTYYLRYLSY 148

Query: 127 ----------LEKAFESREEQLLDFLGKYHSTCSKVFN-YGISSVYRSLKMKLTRMRSIY 175
                      E+A   RE  ++DF  +  S   K+ N     S+ + +K  + +   + 
Sbjct: 149 SYEIKKLKKAAEEARVQREYSIMDFKKQIESLDEKIKNIDKFESMLKEIKEVVNKGEQVK 208

Query: 176 LNRLDLE------NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           L + D+       ++       + +      M K L  K     + L++  +   +  L+
Sbjct: 209 LTKYDIGYLGFILSEIEDYNQQVKTKSDGSDMKKILILK---IDSKLDELRQSKSELILQ 265

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            ++   + + ++   +++  +        L++I  ++        +    L   ++  E 
Sbjct: 266 RQKIEGQLRLLVISGDDIKGDIEKYKLEVLQQIDSEISSLTHEIKNLKINLEETKRLIES 325

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP-HSKLTYIRAKVTPKQIQHVKKGYTA 348
            +I +   G + Y+    S         + +IV   SK   +   +   +   +++G   
Sbjct: 326 CSIRAEKNGYVEYSAELFSGAAISSGAEIGRIVDGQSKRFKVIGYIPNTKSSGIERGQRV 385

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            V+      ++    +  + ++   I  +  N   Q +YEV +++ ++    N I L  G
Sbjct: 386 KVKLAGTDGLK--VVEGKVTRVSRDI--KVANENGQGFYEVEVEVRNVG---NGINLSAG 438

Query: 409 FPAEVLFTAKNTTLAQEIIH 428
              E+    K   L + ++ 
Sbjct: 439 QVCEMSIVVKQERLIKWVLE 458


>gi|89890363|ref|ZP_01201873.1| putative membrane fusion protein, efflux [Flavobacteria bacterium
           BBFL7]
 gi|89517278|gb|EAS19935.1| putative membrane fusion protein, efflux [Flavobacteria bacterium
           BBFL7]
          Length = 450

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 134/401 (33%), Gaps = 43/401 (10%)

Query: 9   LKRNHPASLKRMTLLSIIG--IIGLITWSILLPIEISVSSSG---EILNEDNVVEIKSPF 63
           L+R H     R    + I   +I  + W        SV+ +G    +  +     I+SP 
Sbjct: 25  LERRHYKYFNRFLTGAAIASIVILFLPW------TQSVTGNGYVTTLTPDQRPQTIQSPI 78

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETT-DLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            G I+++ V  G  + +G  +L   +I+      +L K + + +     +  S  + +  
Sbjct: 79  PGRIEQWLVREGDFVAKGDTILRISEIKNEYFDPNLVKRTGQQIDAKTMSVSSYSEKVKA 138

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
               +    + R+ +L     K   +  KV    I  +     +K+   +      L+ E
Sbjct: 139 LESQIAALVQERQLKLEQGRNKLMQSRLKVTTDSIDYIAAQTNLKIAETQLQRAQTLNNE 198

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                L+ +    +K L   +         Q  L  QE  +  S    R +I   +  L 
Sbjct: 199 ----GLKPMTEVEEKRLKTQET--------QAKLISQENKLLTS----RNDIINAQIDLN 242

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I + Y E   +  +            +   +   S  T  +   +   I +P  G I  
Sbjct: 243 RIQQEYAEKIAKARSDQFTAQSSQFDAEAQVSKLESDRTNYQMRNDLYFITAPQNGYINK 302

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR--------FPH 354
                     ++ +PL+ ++P      +   V P  +  +  G    V+        F  
Sbjct: 303 AIFGGLGETFKEGEPLVNVMPADYDLAVETYVEPLDLPLIHLGEEVRVQFDGWPSIVFSG 362

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           + ++    + A +  ++  IS           Y V+L   +
Sbjct: 363 WPNVSYGTYGAKVVAVETFISDNGK-------YRVLLAPDE 396


>gi|291486620|dbj|BAI87695.1| hypothetical protein BSNT_06128 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 489

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 79/477 (16%), Positives = 156/477 (32%), Gaps = 62/477 (12%)

Query: 7   KNLKRNHPASLK-RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +    + P  +    T + I  +I  I +S     E+ + ++ +I        + +  +G
Sbjct: 15  REFYESKPKPIGVFFTYILIALLIACIVFSFYGKKEVILKTAADIQYTKPNSNVTNEVAG 74

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +K   ++   ++ +G  LLT ++ E        K  IK+++      K+    + N  +
Sbjct: 75  KVKTVDIKQVDKVKKGDTLLTLDNTEIQAQKKAVKADIKDVKEQAALNKTLKKSIENDKN 134

Query: 126 VLEKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           +  +              ++  LL+   +   T  K       S+  SL     +++   
Sbjct: 135 LFSEDDHWGYQDQYLSYEKQSNLLESSKENAKTQQKKLKKQKKSIKNSLDKTKNKVKRKL 194

Query: 176 LNRLDLENKS--------------------SLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
               DL++                         +  +     DL  MK+  +KN+ SQ  
Sbjct: 195 QRISDLQDSIKNNKSFAKQDDKYSSYYNSFQTNKQNVEQQLDDLRKMKDELDKNSFSQKK 254

Query: 216 LN---QQERIVYKSTLELRENIHEQKNMLRHINEL------------------YDEANLE 254
            N   Q E +     ++L E   E       IN                           
Sbjct: 255 ENLNGQLESLKQDMLVKLSEEKDELNQSFDEINSSMKSDDSDSDSDNSEETNYKLSIEQL 314

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N L + S+     Q T   +   L +++   E+  I +   G +    + S  +Y Q 
Sbjct: 315 KTNLLNQTSQKQTDLQTTLKSKEDDLKMIDLQLEKYKIKATSDGYVNVLTNISPGDYLQA 374

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              ++ IVP  +       +   +I ++ +     VRF  + +   +  K +I KI P  
Sbjct: 375 GTAILTIVPDKEKLKANIYIPSHEITNINE--KDEVRF--HIENTNQTVKGVITKISPDS 430

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIH 428
                    Q++Y     I       NN   I L+NG   +V     +       + 
Sbjct: 431 ISD---QSGQKFYIAESTIESKEIEKNNGTKIHLKNGMQTDVSIIVDSKRYIDYFLD 484


>gi|116626931|ref|YP_829087.1| secretion protein HlyD family protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116230093|gb|ABJ88802.1| secretion protein HlyD family protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 424

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 59/406 (14%), Positives = 130/406 (32%), Gaps = 17/406 (4%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           + +K + L  +     +  W+     +   S   ++  + ++V I    SG + +  V +
Sbjct: 28  SPVKYIVLGMVAIGAAVGAWAWFHFRDQVSSDDAQV--DAHIVAIAPKISGNVTEVLVRD 85

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
             Q+  G  L+  +  +    ++  + ++      + T ++ +   N      +      
Sbjct: 86  NQQVKAGEVLVRIDPRDYQARVNAARAALLQAESQVVTSRTMVPMTNEST---QSGVSGA 142

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL-RALLS 193
             Q+ D + +             S +  +     ++  S    + DL     LL +A +S
Sbjct: 143 AAQVSDAMAELDRARLNYEQAASSDIAEAEAKVRSKQASNDRAQADLARMKPLLDKAEIS 202

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q D         +  V++++LN  +  +  +                 +N    +   
Sbjct: 203 RLQYDAYQ-----AQARVAESELNAAQEQLKSAQNNANMRKAAVAAAQSRVNMAQSQVQA 257

Query: 254 EFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             AN  +      +            + L   E      TI++P  G +   +S      
Sbjct: 258 SMANRKQVDVRRAETGTASAGVEAARANLAAAELMLSYTTIVAPSDGVVTR-KSVEPGQI 316

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  Q LM ++      ++ A     Q+  V+ G  A +    Y         +I     
Sbjct: 317 VQPGQSLMTLIQLQD-VWVTANFKETQLAQVRAGQKAEIHVDMYGKSVAGHVDSIAGATG 375

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLF 415
             +S       T  + +V+ +I      D  N + LR G   +   
Sbjct: 376 SRLSLLPAENATGNFVKVVQRIPVKILVDNTNGLVLRPGMNVDATI 421


>gi|268602952|ref|ZP_06137119.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
 gi|268587083|gb|EEZ51759.1| conserved hypothetical protein [Neisseria gonorrhoeae PID1]
          Length = 424

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 136/438 (31%), Gaps = 55/438 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S    T  + I  + +I + I        +  G+IL    V+ + +P +G I    
Sbjct: 28  TRPLSFSLWTTFASISALLIILFLIFGNYTRKTTMEGQILPASGVIRVYAPDTGTITAKF 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE+G ++  G  L             +++         + TE      L           
Sbjct: 88  VEDGEKVKAGDKLFALSTSRFGAGGSVQQ--------QLKTEAVLKKTLA---------- 129

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               EQ L  L   H   ++     +  +                 +L +  +    +  
Sbjct: 130 ----EQELGRLKLIHENETRSLKATVERLENQ--------------KLHISQQIDGQKRR 171

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   ++ L   + L   +AVS+ +    E  + +   +L     E+  +L+ I       
Sbjct: 172 IRLAEEMLRKYRFLSANDAVSKQETMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ---- 227

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           NL  A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +      
Sbjct: 228 NLTLASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQ 285

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S+ L+ IVP     Y    +       +K      +R+  Y   +       +  + 
Sbjct: 286 VDPSKLLLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVA 345

Query: 372 PIISQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                +                 +  Y V +K      +       L+ G   E     +
Sbjct: 346 KTALGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHE 405

Query: 419 NTTLAQEIIHPITDNWPK 436
              L + ++ PI     +
Sbjct: 406 KRRLYEWVLEPIYSMSGR 423


>gi|330945745|gb|EGH47183.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 143

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 49/131 (37%), Gaps = 3/131 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8   HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDF 119
             G++ K  V  G  + +G PL   +  +    +   +   +          +E+  LD 
Sbjct: 68  DGGVVSKILVSEGQLVKEGEPLFRLDQTQVEADVQSLRAQYRMAWASLARWQSERDNLDE 127

Query: 120 LNNKYDVLEKA 130
           +    +++   
Sbjct: 128 VRFPAELIAAG 138


>gi|268596163|ref|ZP_06130330.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268681423|ref|ZP_06148285.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
 gi|268549951|gb|EEZ44970.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
 gi|268621707|gb|EEZ54107.1| conserved hypothetical protein [Neisseria gonorrhoeae PID332]
          Length = 424

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 69/438 (15%), Positives = 136/438 (31%), Gaps = 55/438 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S    T  + I  + +I + I        +  G+IL    V+ + +P +G I    
Sbjct: 28  TRPLSFSLWTTFASISALLIILFLIFGNYTRKTTVEGQILPASGVIRVYAPDTGTITAKF 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE+G ++  G  L             +++         + TE      L           
Sbjct: 88  VEDGEKVKAGDKLFALSTSRFGAGGSVQQ--------QLKTEAVLKKTLA---------- 129

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               EQ L  L   H   ++     +  +                 +L +  +    +  
Sbjct: 130 ----EQELGRLKLIHENETRSLKATVERLENQ--------------KLHILQQIDGQKRR 171

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   ++ L   + L   +AVS+ +    E  + +   +L     E+  +L+ I       
Sbjct: 172 IRLAEEMLRKYRFLSANDAVSKQETMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ---- 227

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           NL  A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +      
Sbjct: 228 NLTLASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQ 285

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S+ L+ IVP     Y    +       +K      +R+  Y   +       +  + 
Sbjct: 286 VDPSKLLLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVA 345

Query: 372 PIISQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                +                 +  Y V +K      +       L+ G   E     +
Sbjct: 346 KTALGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHE 405

Query: 419 NTTLAQEIIHPITDNWPK 436
              L + ++ PI     +
Sbjct: 406 KRRLYEWVLEPIYSMSGR 423


>gi|153005976|ref|YP_001380301.1| secretion protein HlyD family protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152029549|gb|ABS27317.1| secretion protein HlyD family protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 498

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 65/437 (14%), Positives = 146/437 (33%), Gaps = 66/437 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + L R  P     +  + + G+   I  S +  +E++    G +     V  + S   G 
Sbjct: 120 RGLVRVSPPWTWALLWVVVSGLCAAIATSFVGKVEVTGRGRGILRPATGVRVLTSQLGGT 179

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + + +  +G ++  GT LL  E              +      ++  ++    ++++ D 
Sbjct: 180 VVRVEARSGERVKAGTSLLRIESPTVQA-------QLLEADRELEALRTQYSAVSSQQD- 231

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                                 +    ++ ++      +E + +
Sbjct: 232 --------------------------------------EHYGEQLANLKARAKRVEEQIA 253

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LR+    +++ +     L ++  VS+            +  E R+++ + +  L   ++
Sbjct: 254 SLRSSAQHYERRVQADVGLLQRGLVSEL-----------AVSETRDSLAQAQRQLSAADQ 302

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             D+   E A+       +L   Q   A   +K   L     Q  I +P  GT+      
Sbjct: 303 TLDQTRQELASLESRREDELWNRQERLAAAQNKRDALAVVLRQAVIEAPQDGTVEALLV- 361

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                 Q  QPL K+VP      + + +  +     K G    +        +    +A 
Sbjct: 362 KEGEVVQAGQPLGKLVPVDSPLQVVSFLAERDRAFAKPGDEVQLELDQLPHAQYGTLRAR 421

Query: 367 IEKIDPIISQQD-------NNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAK 418
           + +I   ++          +       Y V L+ITD   ++  +++LR G    V FT +
Sbjct: 422 VLRIGDDLASPSEIHDALGDQKLEAPSYRVELEITDARAAESAHVKLRTGTLMNVRFTLR 481

Query: 419 NTTLAQEIIHPITDNWP 435
              L   +++P+   + 
Sbjct: 482 TERLITLVLNPLRRWFR 498


>gi|268594111|ref|ZP_06128278.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|268547500|gb|EEZ42918.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
 gi|317163538|gb|ADV07079.1| putative secretion protein [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 424

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 136/438 (31%), Gaps = 55/438 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S    T  + I  + +I + I        +  G+IL    V+ + +P +G I    
Sbjct: 28  TRPLSFSLWTTFASISALLIILFLIFGNYTRKTTMEGQILPASGVIRVYAPDTGTITAKF 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE+G ++  G  L             +++         + TE      L           
Sbjct: 88  VEDGEKVKAGDKLFALSTSRFGAGGSVQQ--------QLKTEAVLKKTLA---------- 129

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               EQ L  L   H   ++     +  +                 +L +  +    +  
Sbjct: 130 ----EQELGRLKLIHENETRSLKATVERLENQ--------------KLHISQQIDGQKRR 171

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   ++ L   + L   +AVS+ ++   E  + +   +L     E+  +L+ I       
Sbjct: 172 IRLAEEMLRKYRFLSANDAVSKQEMMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ---- 227

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           NL  A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +      
Sbjct: 228 NLTLASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQ 285

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S+  + IVP     Y    +       +K      +R+  Y   +       +  + 
Sbjct: 286 VDPSKLFLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVA 345

Query: 372 PIISQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                +                 +  Y V +K      +       L+ G   E     +
Sbjct: 346 KTALGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHE 405

Query: 419 NTTLAQEIIHPITDNWPK 436
              L + ++ PI     +
Sbjct: 406 KRRLYEWVLEPIYSMSGR 423


>gi|289811475|ref|ZP_06542104.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 162

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 57/151 (37%), Gaps = 6/151 (3%)

Query: 291 TILSPIAGTIVYNQ--SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
            I SP+ G I      + +     Q +  L +I P  +      K+ PK    +      
Sbjct: 3   DIYSPVDGVIYKINKSATTHGGVIQAADLLFEIKPKVRTMLADVKILPKYRDQIYVDEAV 62

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE-LRN 407
            +        + K + A I+ I P   +++     Q YY+VI+       +++++  L+ 
Sbjct: 63  KLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVIIAFD---VNEDDLRWLKP 119

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G   +        ++ + ++ P+     K F
Sbjct: 120 GMTVDASVITGKHSIMEYLLSPLMKGVDKAF 150


>gi|75906844|ref|YP_321140.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75700569|gb|ABA20245.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 710

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/347 (16%), Positives = 117/347 (33%), Gaps = 23/347 (6%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             +L++ K+ ++ +    ++  K+    L  + +   K+ E++ EQ             +
Sbjct: 369 AKNLLEDKEQAVISAEAKLEQAKANAKNLLEEKEQAVKSAEAKLEQAKANAKNLLEEKDQ 428

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                 + + ++       +       +  E K    +A   + Q++             
Sbjct: 429 GVITAEAKLEQAKANAKNLLEEKEQAVIAAEAKLEQAKANAKNLQEEKD----------- 477

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-- 269
               L   +  + K+  E+  N          I +      +  A   KE    L+Q   
Sbjct: 478 --QALTVAQTNLAKARTEINPNDASVTVASERIKQEQARGEVTLAALKKERETLLQQRLE 535

Query: 270 -QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            Q+       +L   E    Q  + +PIAGT++     +     Q S+ + +I P +   
Sbjct: 536 FQKQLDRNRKELQQAENDLNQSVVRAPIAGTVLQLNLRNPGQVVQASEAIAQIAPLNAPI 595

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN-----LQT 383
            I+A V  + I  VK G    ++            K  ++ I P      NN        
Sbjct: 596 QIKANVQAQDINKVKPGQQVQMQVSACPYPDYGTLKGTVKTIAPDALPVANNNPQTTTAK 655

Query: 384 QEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
              YEVI++     +   D   +L+ G   +    ++  T+ + I+ 
Sbjct: 656 TAAYEVIVEPQTPYVGRGDRQCQLKTGMQGKADIISRRETVLRFILR 702



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 96/296 (32%), Gaps = 20/296 (6%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             ++  I ++G+   S+L    ++V     I     +  ++S  SG I K  V     + 
Sbjct: 43  GVVVFSIFVVGVALTSVL-KYNVTVKVPATIRPVGELKLVQSLVSGKILKIDVAENQMVN 101

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL----EKAFESRE 135
           +G  +   +D          +  I+  +  ++   + L  ++ +        ++   + +
Sbjct: 102 EGQAIAYIDDSRLQTQKSQLQNLIQQSQLQLNKIDAQLGEIDAQITAQTNLNDRTTIAAQ 161

Query: 136 EQLLDFLGKYHSTCSKVFNYGISS-----VYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +L      Y     K       +     + R  K +L R + +     + E   +L R 
Sbjct: 162 AELSGTQRNYADQQVKATADMTQAQSALTLARIQKDRLQREKLLTATVRETEAALNLARV 221

Query: 191 LLSSHQKDLTMMKN---------LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                Q++  +            L  +              V ++   L     +Q+ + 
Sbjct: 222 QSDRLQREKLLKTTVDEAETGLKLAREQRDRLRRDRLLRTTVQETETALNLAKAQQERLQ 281

Query: 242 RHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           R           E A  L  + RD L+Q++   A        L   R Q+  L PI
Sbjct: 282 REQLLAKTVQEAETALNLARVQRDRLQQDKVLTATVQEAAAALSLARVQRERLQPI 337


>gi|189350128|ref|YP_001945756.1| putative bacteriocin secretion protein [Burkholderia multivorans
           ATCC 17616]
 gi|189334150|dbj|BAG43220.1| putative bacteriocin secretion protein [Burkholderia multivorans
           ATCC 17616]
          Length = 425

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/401 (13%), Positives = 133/401 (33%), Gaps = 55/401 (13%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            + +G ++ +  +V++ +  SGI+ +  V+ G ++ +G  L T                 
Sbjct: 59  TTVAGVVMPDAGLVKVYALQSGIVVERNVKEGQRVTRGQTLYTVST-------------- 104

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                D+   A  + +  L+D   +  ++     +   S     
Sbjct: 105 ---------------------DLQSAAQGATQAALIDQARQRKASLLSEIDKTRSLQQDE 143

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                 ++ ++      ++++ +  R   S         ++L  ++ +S++   Q+E  +
Sbjct: 144 RDTVRAKIANLKGELARIDDQLAAQRLRTSIAADGAQRYRHLLAQDYISKDQAQQREADL 203

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                +L   + E+ + L+ +     EAN   A    +   +L Q  R   D    L   
Sbjct: 204 LDQQSKLNGLLRERASTLQSLT----EANNALAGLALKQQNELAQIDRNVIDVDRTLIES 259

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E  R +  + +P  G ++             S+PL  +VP          V    I  V+
Sbjct: 260 EAKR-RIVVTAPETG-VLTATIADVGQAVDTSRPLASVVPDGARWQAHLFVPSAAIGFVR 317

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPII------------SQQDNNLQTQEYYEVIL 391
            G    +R+  +   +  +++A +  I                +    + +   YY V +
Sbjct: 318 VGEPVLIRYQAFPYQKFGQYRATVVSIARTALSAAELANDGGPAAVPGDGKDATYYRVSV 377

Query: 392 KITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +             L+ G   +     +   L + ++ P+
Sbjct: 378 ALDAQHVRAYGAPQPLQAGMALQADILQERRRLYEWVLEPL 418


>gi|209526057|ref|ZP_03274590.1| chromosome segregation ATPase-like protein [Arthrospira maxima
           CS-328]
 gi|209493583|gb|EDZ93905.1| chromosome segregation ATPase-like protein [Arthrospira maxima
           CS-328]
          Length = 625

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 79/609 (12%), Positives = 174/609 (28%), Gaps = 192/609 (31%)

Query: 14  PASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P  L  + L  I+ +    + W+    IE +V + G++       EI++P +G + +  V
Sbjct: 16  PGLLSHLFLWMIMLVSTTSVIWAYFANIEQTVPAMGQLALTSGAREIQAPTTGAVVRLHV 75

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL------NNKYDV 126
           ENG ++ +  P+LTF     +  +     +++ LR  ++ E    + +       N    
Sbjct: 76  ENGDRVERNQPILTFSPTNPSADLR----AVETLRATLEKENEFYESIVNNQITTNLPPQ 131

Query: 127 LEKAFESREEQLLDFL------------------------------GKYHSTCSKVFNYG 156
           L      RE +  +                                   + +        
Sbjct: 132 LADLIRDREARSQENQTLQSLVDELYHGRGTAMSFSPAMAGLVANYRAEYQSRVATGQLK 191

Query: 157 ISSVYRSLKMKLTRMRSIY-------------LNRLDLE-NKSSLLRALLSSHQKDLTMM 202
           I  + R L+     +R+                 +L+L  N+ S    LLS ++  L  +
Sbjct: 192 IIELERQLQQNRDSLRAATEKLEYTQNQLTYSEQQLNLAGNQLSKSEELLSVNESILAQI 251

Query: 203 KNLFEKNAVS----------------------------QNDLNQQERIVYKSTLELRENI 234
             L E+ A+S                            Q ++NQ+ R + +   E++   
Sbjct: 252 SPLVEQGAMSDLQRKQREQEILRSQNEVIGQQDRIEQRQGEINQRRREIQEQRAEIQRLE 311

Query: 235 HEQKNMLRHINELYDEANL------------------EFANYLKEISRDLEQNQRTFADE 276
           +E++  L  I+   +E                     + A+   ++SR   +N++  +D 
Sbjct: 312 NEEQRTLASISRAQEELQNTKDSWARDIYNRIQENHKQIASSDSQLSRSRLENEKRISDI 371

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFS-----------------SSNYAQQS---- 315
            S++  L++ R  + + +P +G I   +  +                  ++  +      
Sbjct: 372 KSQIEKLQEQRNTQVLRAPASGIIFELEPSTKSNAALDMNQDEICSYVINSILRPGDPMP 431

Query: 316 -------------QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT--------------- 347
                        QPL+ I+   +       +    +  V                    
Sbjct: 432 SRCDEAYFEAQQTQPLVTILDDDEGLKAEVHINNSDMALVLNALRMKRELLTPFDGKEVA 491

Query: 348 ---------------------------------ATVRFPHYADIREKKFKAIIEKIDPII 374
                                              V    +           +  I    
Sbjct: 492 GEVIECQVEKDCICPTSAAAREEIGIADEQCIGVEVNIDAFPSNEFGTVPGELIWISQNA 551

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDN--------NIELRNGFPAEVLFTAKNTTLAQEI 426
              +       +    +K+    F  N         I+L++G            T+ + +
Sbjct: 552 IPPEEGRPFFSF-RANIKLERQYFMLNEDIPGQEIQIKLQSGMAVNTKVNIGKRTVLRML 610

Query: 427 IHPITDNWP 435
              +T  + 
Sbjct: 611 FSRLTGKFE 619


>gi|260061581|ref|YP_003194661.1| hypothetical protein RB2501_08270 [Robiginitalea biformata
           HTCC2501]
 gi|88785713|gb|EAR16882.1| hypothetical protein RB2501_08270 [Robiginitalea biformata
           HTCC2501]
          Length = 453

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 58/366 (15%), Positives = 132/366 (36%), Gaps = 32/366 (8%)

Query: 25  IIGIIGLITWSILLPIEISVSSSG---EILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           ++   G+    + LP   +VS +G    +  +     ++SP  G I+K+ V  G  +L G
Sbjct: 37  LLAFAGIAVIILFLPWTQTVSGTGYLTTLRPDQRPQTVQSPIPGRIEKWHVREGDFVLAG 96

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             +L   +++  +  D +   +   R  ID +  ++     K   LE    +  ++    
Sbjct: 97  DTILVMSEVK-DEYFDPQL--VDRTRQQIDAKSRSVGSYQEKVRALENQVAALGQEQA-- 151

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             K   T +K+    +     S+         +   R  +           +  ++ L  
Sbjct: 152 -LKLEQTRNKLMQARLKVKSDSID--------LEAARTGISIAQRQYDRTSTLEEEGLKA 202

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           + ++ EK    +  L + +  +  +  +L  + +E  N    +  +  E   + A    E
Sbjct: 203 VTDVEEK----RLKLQEAQAKLISAENKLLASKNEVLNARMEVGRIQAEYQDKVAKAQSE 258

Query: 262 ISRDLE---QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           +          +       ++ T  E+ RE   I +P AG +            ++ + L
Sbjct: 259 LFTAQSAQFDTEAQVTKLENQFTNYERRRELNVIRAPQAGYVNKALQAGIGQTFKEGEQL 318

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR--------FPHYADIREKKFKAIIEKI 370
           + I+P S    + A ++P  +  +  G    ++        F  + +I    +  ++  I
Sbjct: 319 VSIMPASVDLAVEAYISPIDLPLIHVGEKFRIQFDGWPAIVFSGWPNISFGTYGGVVVAI 378

Query: 371 DPIISQ 376
           +  IS 
Sbjct: 379 ETYISP 384


>gi|221215822|ref|ZP_03588780.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia multivorans CGD1]
 gi|221164287|gb|EED96775.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia multivorans CGD1]
          Length = 425

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 56/401 (13%), Positives = 133/401 (33%), Gaps = 55/401 (13%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            + +G ++ +  +V++ +  SGI+ +  V+ G ++ +G  L T                 
Sbjct: 59  TTVAGVVMPDAGLVKVYALQSGIVVERNVKEGQRVTRGQTLYTVST-------------- 104

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                D+   A  + +  L+D   +  ++     +   S     
Sbjct: 105 ---------------------DLQSAAQGATQAALIDQARQRKASLLSEIDKTRSLQQDE 143

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                 ++ ++      ++++ +  R   S         ++L  ++ +S++   Q+E  +
Sbjct: 144 RDTVRAKIANLKGELARIDDQLAAQRLRTSIAADGAQRYRHLLAQDYISKDQAQQREADL 203

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                +L   + E+ + L+ +     EAN   A    +   +L Q  R   D    L   
Sbjct: 204 LDQQSKLNGLLRERASTLQSLT----EANNALAGLALKQQNELAQIDRNVIDVDRTLIES 259

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E  R +  + +P  G ++             S+PL  +VP          V    I  V+
Sbjct: 260 EAKR-RIVVTAPETG-VLTATIADVGQAVDTSRPLASVVPDGARWQAHLFVPSAAIGFVR 317

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPII------------SQQDNNLQTQEYYEVIL 391
            G    +R+  +   +  +++A +  I                +    + +   YY V +
Sbjct: 318 VGEPVLIRYQAFPYQKFGQYRATVVSIARTALSAAELANDGGPAAVPGDGKDATYYRVSV 377

Query: 392 KITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +             L+ G   +     +   L + ++ P+
Sbjct: 378 ALDAQHVRAYGAPQPLQAGMALQADILQERRRLYEWVLEPL 418


>gi|18071183|ref|NP_542220.1| ABC-transporter accessory factor [Lactobacillus curvatus]
 gi|17986227|gb|AAL54837.1| ABC-transporter accessory factor [Lactobacillus curvatus]
          Length = 461

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 70/454 (15%), Positives = 161/454 (35%), Gaps = 45/454 (9%)

Query: 17  LKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
              + LL ++ I+  L+ +S     EI++   G +    NV  I+     ++KK  ++ G
Sbjct: 19  FSIIVLLPVVAILTCLVVFSFFGKREITIDGQGNLDTAQNVPIIQGTTGSVLKKNYLKEG 78

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY----------- 124
             + +G  LL +++    +   L +  + NL   I + ++    L               
Sbjct: 79  RFVKKGQMLLVYKNTRNQNQKVLLENQVDNLNRQISSLQTLKTGLLTNQNTFLEADQFGY 138

Query: 125 -DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS--VYRSLKMKLTRMRSIYLNRLDL 181
            D+L+   + R+  L++       +   +     +   +Y S+      + +  +    +
Sbjct: 139 KDLLKGYLDQRQIYLIENKLLTDKSNLNINKQQQADQLLYNSINQSQDSLTAYQVIYDAI 198

Query: 182 EN-----KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                  ++S    +   +Q  L    N  EK  +    L   ++ +      +  N  +
Sbjct: 199 NTNKSYPQNSKFYYIYQGYQSKLKSTSNQNEKEILKSETLASIQQQIDTLKNTIDSNKEQ 258

Query: 237 QKNML------RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +  +        +++   ++     A+  +  ++ L + +++  +  + L  L     + 
Sbjct: 259 KIALQGSNDLNANLSTNNEKMATLQADQTQSATQQLSKAKQSLLEIQTNLKQLNSDSSEY 318

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYT 347
           T+ +P  G +  N  F    YA     L ++ P   +     I+A +  + I  +KKG  
Sbjct: 319 TVKAPKTGVLHLNDEFKGVQYAGTGTTLAQVYPILKNQDKIQIKAYIPSQDISSIKKGQI 378

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             ++       +    +  +  I         N + + YY V     + + S +N  L +
Sbjct: 379 LRLQLIR-NLPKAIIIQGKVNNISV----APINSKNRNYYIV---TAEASLSASNKSLIH 430

Query: 408 -GFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
            G   +V      TT              K+F R
Sbjct: 431 YGMSGKVSIITGKTTFFNY-------YKNKLFNR 457


>gi|167615874|ref|ZP_02384509.1| secretion protein, putative [Burkholderia thailandensis Bt4]
          Length = 431

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 54/437 (12%), Positives = 148/437 (33%), Gaps = 51/437 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P S++    LSI      I   + L    + +  G +     ++ + +P    +++  
Sbjct: 32  DVPISMRFFCYLSIAMFAMFIVALVRLTYANTENVMGMLTPRSGLIGVGAPPGWAVREVF 91

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V     +  G  LL+      T  +  +  +++ +R  I  ++  +              
Sbjct: 92  VAKDQHVKAGQKLLSV--TRDTSFVS-QANNVQGMRESIKRQRVEVG------------- 135

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                Q +D     + +  +  N  I++   S  +              ++ +    + +
Sbjct: 136 -----QQIDAAKLEYQSTIQQINQQIAAFDESRGL--------------IDKQIQDQKRI 176

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +S +Q+    +K L  +  V+    NQ      +++   ++ +  + ++ ++  +L  + 
Sbjct: 177 VSEYQERRDRVKQLLNEQVVTLEQYNQVNTQYLQASQAYQDLMLRRADLAKNAMKLRGDL 236

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               + Y    + +L+  Q     +   +         + + +P  G IV        + 
Sbjct: 237 ETVQSKYDGS-NAELKIKQEELNSKEYNI----DESVNQVLYAPADGQIVRLDVV-QGSV 290

Query: 312 A-QQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  +++I+P           +   +   V+      + +  Y   +   ++  +  
Sbjct: 291 IDPPGTRVVEILPAKADGLIAELYIPSSKAGFVRPSQEVKLAYGSYPVEKFGTYRGKLLS 350

Query: 370 IDPIISQQ------DNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTT 421
           + P+           +N   Q Y++  +++ D   AF    + L+ G         +  T
Sbjct: 351 VSPVAFTAKELNLPADNGAPQTYFKSWVELVDRNPAFEGKALALKAGMTLRADIVLEKRT 410

Query: 422 LAQEIIHPITDNWPKIF 438
           L + +  P+     +IF
Sbjct: 411 LLEWLFEPLYRIRQRIF 427


>gi|163753867|ref|ZP_02160990.1| hypothetical protein KAOT1_19632 [Kordia algicida OT-1]
 gi|161326081|gb|EDP97407.1| hypothetical protein KAOT1_19632 [Kordia algicida OT-1]
          Length = 453

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 63/392 (16%), Positives = 143/392 (36%), Gaps = 49/392 (12%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQI 78
            L    I+G+I   + LP   ++S  G++     +     I+S   G I+++ V  G  +
Sbjct: 36  FLLTFAIVGIIV--LFLPWTQNISGQGQVTTLRPDQRPQTIQSQIPGRIEQWYVREGDSV 93

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  +L   ++++    D     ++     I  + S++     K   LE+   +    L
Sbjct: 94  RKGDTILKISEVKSEYFDDKL---VERTGDQIKAKSSSVVAYKGKISALERQVSAL---L 147

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +   K   T +K+    +     S+ ++  R+      R             L+  ++ 
Sbjct: 148 RERDLKLEQTQNKLLQAKLKIKGDSIDVEAARINKNIAQR--------QYDRTLTLQKEG 199

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  +K++ EK    +  L + E  +     +   N ++  N    ++    +    +A+ 
Sbjct: 200 LKAVKDVEEK----RLKLQETEAKLISLENKFLANKNDLINAKIELS----KTKAAYADK 251

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-------SPIAGTIVYNQSFSSSNY 311
           + +   D+   Q +  D  +++T LE       I        +P  G I           
Sbjct: 252 ISKAQSDMFTAQSSQFDTEAQVTKLENQYTNYKIRNGLQYILAPQDGFINKALKGGIGET 311

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR--------FPHYADIREKKF 363
            ++ + L+ I+P S    + + V P  +  +  G    ++        F  + ++    +
Sbjct: 312 FKEGEELVGIMPASYELAVESYVRPIDLPLIHIGEKVRIQFDGWPAIIFSGWPNVSYGTY 371

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            A +  I+  IS+          Y ++L   +
Sbjct: 372 GAKVVAIENFISENGK-------YRILLAPDE 396


>gi|221233656|ref|YP_002516092.1| type I secretion adaptor protein hlyD [Caulobacter crescentus
           NA1000]
 gi|220962828|gb|ACL94184.1| type I secretion adaptor protein hlyD [Caulobacter crescentus
           NA1000]
          Length = 413

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/422 (9%), Positives = 127/422 (30%), Gaps = 49/422 (11%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             + +  L  + ++   T++         +  G +  +  ++ + +   GI+    V  G
Sbjct: 28  PSRVLAGLVCLVVLAGATFAATASYARKETVVGWLTPQAGMIRLAARQGGIVANVHVREG 87

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            +++ G P+ T       +  D   V  ++L                       +  +  
Sbjct: 88  DRVVVGQPIATLTLSSALEGGDSFAVLSRSL---------------GAQSSAAGSRAAAT 132

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  L    +  +      N  ++   RSL ++  R                     L+  
Sbjct: 133 QAALAAESRQLTQRRAALNRELAEAKRSLALQTER---------------------LTLA 171

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   + +  +  +S  +L  +      + L +++      +          E +   
Sbjct: 172 RAEVARAETIAAQGFLSPRELQARR----SAELAVQQEASTLSSQALSYERQIGEVDARL 227

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A    ++     +   T A    + T +E    +  +++ +AG +       +       
Sbjct: 228 AAIPIDLQAARAEAASTLAGLEQQATQVEAQ-GRYVVVATVAGRVAALPV-EAGQTVGVG 285

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             +  + P             +    V++G    + +  +   +    + ++  +   + 
Sbjct: 286 AAVAVLTPGDSALVAELYAPSRAAGFVRQGQEVRLMYQAFPHQKFGVGEGVVTAVSRTVL 345

Query: 376 QQDNNLQT-----QEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                        +  + + +K+   ++A     + L+ G            +L + ++ 
Sbjct: 346 APSEVAIPGLQVQEPVFRIRVKLARDNVAAYGETLPLQPGMLLSADVVIDRRSLLEWLLD 405

Query: 429 PI 430
           P+
Sbjct: 406 PL 407


>gi|283784144|ref|YP_003364009.1| microcin secretion protein [Citrobacter rodentium ICC168]
 gi|282947598|emb|CBG87153.1| microcin secretion protein [Citrobacter rodentium ICC168]
          Length = 437

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 61/429 (14%), Positives = 151/429 (35%), Gaps = 58/429 (13%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     ++L  ++ +  L+            + +G ++  D V++I +  +G I +  ++
Sbjct: 46  PWRWVIISLAGLVTVATLLL-VFFGSYTKRETMTGALVPVDGVIDIVAVSAGTIVELPIQ 104

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +G+ + T     +T     ++   + L    D  +  L  L    D+L      
Sbjct: 105 EGQSVKKGSTIATLSSEISTRYGQTRESIARQLSLQNDALEQELKNL----DILSAETLR 160

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            +E   +F                      L+ +L ++  IY +RL            + 
Sbjct: 161 GDENQKNF----------------------LEQQLKKLEGIYASRL----------RQVR 188

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQE---RIVYKSTLELRENIHEQKNMLRHINELYDE 250
             +  L  +K + ++   S   + +QE           ++     + +  L  + +   E
Sbjct: 189 LAEGQLKKLKLMRDEGYASNRQVEEQEVSLLEAQSRAQDVARQQIDLQQQLTRVLQQMRE 248

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
             +   + + +I+R L + ++   +  S+ +I         + +P+  TI          
Sbjct: 249 HPINKIDKINDINRRLSELKQAMMENESRRSI--------VLNAPLNATIASVLV-KQGQ 299

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                Q +  ++P +     R  V+ + I  +  G   T+R+  Y   +  +   ++  +
Sbjct: 300 MVNAGQTVASLLPENAALQARMMVSSRAIGFIVPGQRVTLRYQAYPWQKFGQQYGVVSDV 359

Query: 371 DPIISQ-------QDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
             +            N+   +++Y V +K+           ++L+ G   E  F      
Sbjct: 360 SRVSLSPQEVSAITGNSQVNEQHYIVKVKLDKQFIHAYGQQVKLQPGSALEADFLIDKRR 419

Query: 422 LAQEIIHPI 430
           L + ++ P+
Sbjct: 420 LYEWVLEPL 428


>gi|220908423|ref|YP_002483734.1| secretion protein HlyD [Cyanothece sp. PCC 7425]
 gi|219865034|gb|ACL45373.1| secretion protein HlyD [Cyanothece sp. PCC 7425]
          Length = 509

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 65/442 (14%), Positives = 148/442 (33%), Gaps = 40/442 (9%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
             +   + WS+   I I+V+  G ++    +V+ +S  SG I   +++ G +I  G  + 
Sbjct: 73  FMLAVALLWSVFGRIPITVTGQGVLIAPRGIVQAQSTGSGRILTLEIKQGDRIQVGEEVA 132

Query: 86  TFEDIETTDLIDLKKVSIKNLRC------HIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           T +       ++ ++ ++  L         +  ++  L+    +    +       E + 
Sbjct: 133 TLDQSLLRRQLEQQQANLALLEQQNRQSDRLLRDQITLERRTLERQRRDLQASLEREGIT 192

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             L +            +    +     ++ ++    +RL L  +  L + +    ++D 
Sbjct: 193 PVLRQQSEAAIVQKRRTLEQQIQQNIALMSTLKQRRDSRLSLYQQGVLSQDIYLQAEQDY 252

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              KN  +       DL  Q   + +  L+    + E    LR ++    + NL  A+ L
Sbjct: 253 LNAKNQLDAARAQLQDLQVQSTNIQRDYLQNLNRLDEIATRLRDLDSQAAKLNLNTADRL 312

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
              +  +++ +R       +L        Q  ++S +AG ++           +   PL 
Sbjct: 313 NNQTNQIQEVKRQIGQLQVQLA------NQGRVVSEVAGRVLEVSVV-PGQVIEAGFPLA 365

Query: 320 KIVPHSKLTYIR--AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PIIS 375
            I    K   +   A  +    + +K G T  V        +       +  +   P+ S
Sbjct: 366 TIAIDKKHGQLESLAYFSDADGKKIKPGMTVQVTPSLIKREQFGGILGSVASVSPFPVSS 425

Query: 376 QQDNNLQTQEYY--------EVILKITD--------------LAFSDNNIELRNGFPAEV 413
           QQ ++   Q            V +++                 + +  +++L  G   +V
Sbjct: 426 QQVSSTVGQPDLGQSLTSADPVRIEVIASLEINPNSPSGYQWSSSAGPDLQLSPGTTTQV 485

Query: 414 LFTAKNTTLAQEIIHPITDNWP 435
                       II PI  +  
Sbjct: 486 RVRVGERAPISYII-PILRSMT 506


>gi|124268978|ref|YP_001022982.1| membrane-fusion protein [Methylibium petroleiphilum PM1]
 gi|124261753|gb|ABM96747.1| membrane-fusion protein [Methylibium petroleiphilum PM1]
          Length = 428

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 57/436 (13%), Positives = 129/436 (29%), Gaps = 63/436 (14%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P SL  +T  ++     +I +  +         +G ++ +  V+ +  P +  + +   +
Sbjct: 27  PLSLSLLTACAVGAAATVIAYLCIGEYTRKARVAGVLVPDQGVIRLLPPEAATVLERHAQ 86

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +G  L       +T   D         R     E+S    +  +  +LE    +
Sbjct: 87  EGQTVRRGDALFVLSVDRSTASGD---AQASVQRSLAVKERSLQGAVQQQAALLEAQRIA 143

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            E Q+ D  G+                                    L+ ++ L R  L 
Sbjct: 144 LERQIADRRGEL---------------------------------AQLQVETQLHRQRLV 170

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE---LYDE 250
             ++ +  +++L   N +S   +  +   V     +L+    ++   LR I        E
Sbjct: 171 LAEQAMARLESLRADNFISSAQVQAKSEEVLAVQAQLQGLERQRATQLREIGALEVQRRE 230

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
             L       E+ RDL    +  A+  ++        ++  + +P  G ++         
Sbjct: 231 LPLRAQVATGELERDLATVAQEAAETEAR--------QRIVVRAPSDG-VLGAVLADPGQ 281

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
               +  L  +VP               +  V+   T  +R+  Y   +       + ++
Sbjct: 282 SVSPAAALASLVPSDARLQAHLYAPSSALGFVRPDQTVLLRYQAYPYQKFGHQTGHVLQV 341

Query: 371 DPIISQQDN-------------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLF 415
                Q                 +  +  Y + + +   +         L  G   E   
Sbjct: 342 SRTPLQSAELAGVPLAGVANYSTVSGEPLYRITVALDRQSVPAYGQQQALSAGMQLEADV 401

Query: 416 TAKNTTLAQEIIHPIT 431
                 L + +  P+ 
Sbjct: 402 ELDRRRLIEWLFEPLL 417


>gi|218678194|ref|ZP_03526091.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           etli CIAT 894]
          Length = 175

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 4/165 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR+    +  +  LSI  + G+  W+    +  +V   G ++   +V +I+    GI+ K
Sbjct: 9   KRSLNRHVAIVGALSIALVCGIGGWAATTELSSAVIGEGVVVVNGDVKKIQHLTGGIVSK 68

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV 126
             V     +  G  L+  +   T   + + + ++  L   R  +  E+   +  N + ++
Sbjct: 69  LLVAENDHVTAGQVLIQLDGTTTKAQLSIVESTLAQLYARRARLKAERIDAESFNVEENI 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +    S    LLD   K   +       G+ S   S K +L   
Sbjct: 129 SDLTSSSAARDLLDGETKLFDSRRSAL-VGMKSQLASRKDQLAEQ 172


>gi|599857|emb|CAA86947.1| accessory factor for ABC exporter [Lactobacillus sakei]
          Length = 461

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 80/452 (17%), Positives = 163/452 (36%), Gaps = 51/452 (11%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            R +      + +  +I + GLI +S     EIS+   G +  + NV  I+   +  IK+
Sbjct: 13  SRRYNNFSTMIIIPVVILLCGLIIFSFFGKREISIEGQGNLEPKQNVPIIQGSTNSTIKQ 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKY-- 124
             ++ G  + +G  LL +++    +  +L    I NL      ++T K  L    N +  
Sbjct: 73  NYLKEGQLVKKGQTLLIYKNSRNKNQKELLNNQIDNLNRQISCLETLKFGLQNNQNSFTN 132

Query: 125 -------DVLEKAFESREEQLLDFL---------GKYHSTCSKVFNYGISSVYRSLKMKL 168
                  D+L    + R+  L++                  S++ N  I+    +LK   
Sbjct: 133 VDQFGYQDLLNSYLDQRQIYLIENQMLTNKSVVNRNKQKEASQILNETINRTELNLKAYQ 192

Query: 169 TRMRSIYLNRL---------DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
               SI  N+            +   + L++  +  +KD      L    A +Q  ++  
Sbjct: 193 AVYNSINKNQSYDKDAKYYYIYQGYQANLKSTSNQAEKDSIKNATL----ATAQQQIDTL 248

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +  V  +  + +  + E  ++  +I    ++ ++  A  ++  ++ L + +++  +  + 
Sbjct: 249 QDTVDSTKGQ-KVALQEFDDLKTNIGTNNEKLSILQAGQVQSANQQLVKAKQSLLEIKTT 307

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTP 336
           L  +     +  I +P +G +  N  F  + Y      L +I P+        IRA +  
Sbjct: 308 LKQINTDSSEYIIKAPKSGVVHLNDDFKGAKYTGTGSTLAQIYPNLKKQNSIQIRAYIPS 367

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAII--EKIDPIISQQDNNLQTQEYYEVILKIT 394
           + I  +KK     ++       +       I    I PI     N      YY V     
Sbjct: 368 QAIASIKKKQQLRLQIIR-NVPKALILNGTINNISISPITLNHGN------YYIVTANAP 420

Query: 395 DLAFSDNNIELRN-GFPAEVLFTAKNTTLAQE 425
               ++ N  L + G   +V      TT    
Sbjct: 421 ---ITEANRTLIHYGMVGKVSVITGKTTFFNY 449


>gi|86131535|ref|ZP_01050133.1| HlyD family secretion protein [Dokdonia donghaensis MED134]
 gi|85817980|gb|EAQ39148.1| HlyD family secretion protein [Dokdonia donghaensis MED134]
          Length = 450

 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 69/415 (16%), Positives = 138/415 (33%), Gaps = 40/415 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSG---EILNEDNVVEIKSPF 63
           K  K+ H     R   L    IIG+I   + LP   +V+  G    +  +     I+S  
Sbjct: 23  KAQKKQHFKYFNR--FLVAFAIIGVII--LFLPWTQNVTGKGFVTTLTPDQRPQTIQSQI 78

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I+++ V  G  + +G  +L   +I+      L     +  R   D + +A+    +K
Sbjct: 79  PGRIEQWFVREGDYVKKGDTILRISEIKNEYQDPLLAERTRQQR---DAKSNAVGSYKSK 135

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              LE    + + +    L +  +   +      S     +  +  R  +          
Sbjct: 136 VQALENQLGALQRERGLKLQQAENKLKQSRFKVQSDSIDLVAARTNRDIAQTQYERTATL 195

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLR 242
           +S  L++      K L + +   E   +SQ N L   +  V  + LE+            
Sbjct: 196 QSEGLKSTAEVEDKRLKLQET--EAKLISQENKLLASQNEVLNANLEI-----------S 242

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I   Y E   +  +     S      +   +   +  T  E     + +++P  G I  
Sbjct: 243 RIQATYAEKISKAQSDKFTASSAQYDTEAQVSKLDNASTNYEIRSTLQYVVAPQNGYINK 302

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR--------FPH 354
                     ++ + L+ I+P      +   V P  +  +  G +  V+        F  
Sbjct: 303 AIKAGIGETFKEGEQLVGIMPSDYDLAVETFVRPIDLPLIHTGESIRVQFDGWPAIVFSG 362

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNG 408
           + D     +   +  ++  IS           + V++     A S   N+ + +G
Sbjct: 363 WPDASFGTYGGTVVAVETFISSNGK-------FRVLIAPDPEAESWPKNVRVGSG 410


>gi|104783061|ref|YP_609559.1| type I secretion system membrane fusion protein, HlyD [Pseudomonas
           entomophila L48]
 gi|95112048|emb|CAK16775.1| Putative Type I secretion system membrane fusion protein, HlyD
           [Pseudomonas entomophila L48]
          Length = 418

 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 64/399 (16%), Positives = 130/399 (32%), Gaps = 53/399 (13%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +G ++ E  +V++ +P  G+++   V  G Q+  G  LLT          D  +V+I 
Sbjct: 55  AVTGVLVPEGGLVKVFAPQVGVVQDLAVSEGQQVQAGAALLTLVSDTHNGDADANQVAIS 114

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L                                   + + +S+ +           +  
Sbjct: 115 RL-----------------------------------IQRRNSSLADEIVETKVLHQQER 139

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + K  R+  +   +  +  + +L    L+  Q        L  ++ VS++ L  ++    
Sbjct: 140 EGKQRRLAMLQGEQDKVVAQIALTSQRLALAQGIAERYTELQRQDFVSRDLLQDKQ---- 195

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            + LE+R    E    L  +         E A      ++ L    R   +  S L   E
Sbjct: 196 DAVLEVRLRAEELNRSLLALRNDSAALRAELAELPFNQTKQLADLDRRLLESQSSLLESE 255

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
             + Q  I +P AG +      +    A  S+PL  +VP +   Y    V  +    V+ 
Sbjct: 256 -VKRQVVITAPAAGEVTAIGVVN-GARADVSRPLFSLVPQNSQLYAELYVPSRSAGFVRP 313

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ----------TQEYYEVILKIT 394
           G+   +R+  Y        +  +  +       D  +               Y V + + 
Sbjct: 314 GHAVMLRYQAYPYQHFGLARGTVASVSRSALPADEIMTVGAASEALREQGPLYRVRVTLE 373

Query: 395 DLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             +         LR+G   +     +N  L + ++ P+ 
Sbjct: 374 RQSLFARGREERLRSGMQLDADIMLENLPLYEWLLEPLR 412


>gi|166712321|ref|ZP_02243528.1| probable secretion protein [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 431

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 48/425 (11%), Positives = 126/425 (29%), Gaps = 51/425 (12%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
              M L  ++ I  ++ +         V   G ++     V + +P +G + K  V  G 
Sbjct: 42  AGGMALAGLLIIALIVLFLATFSTSRKVQWQGVVVPAGGTVSVIAPSAGSVSKVLVREGE 101

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           Q+  G  +    +      ++    +I                                 
Sbjct: 102 QVHAGQAMFMLSESLGNARLEGGDGTI--------------------------------- 128

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              + L +   +  +                L R+            +  L   +++  +
Sbjct: 129 --PELLHERRQSLKRETIERQRKAELLKNSMLERLGDYDEEIRASSQQEQLQVQIIALAE 186

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +      +L     VS   +    R  +   L  ++ + + +  ++ +         +  
Sbjct: 187 QTARTYSDLESSRYVSGIAV----REKHLDLLGKKQQLVDIRRQIQQLRRERSSLASDMQ 242

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           + + +   D    QR   +   +LT  E T  +  ++  +   +V   + ++        
Sbjct: 243 SQMAQSKLDSLDLQRKTFELDQQLT--ENTGTRTVVVRALGKGVVGTINVAAGQGVGALL 300

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  ++P  +   +      + +  +++G   ++R+  +   +  + K  ++ I     +
Sbjct: 301 SLAVLIPEGRPLEVEMYAPSQAVGLMREGMDVSLRYSAFPYQKFGQQKGRVKAISRSTMR 360

Query: 377 QDN--------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEI 426
            +             +  Y V + I           + LR G   E     +   L + I
Sbjct: 361 VEEVRLPASLMKSGAKPLYRVRIDIGSPTVRVYGKEVPLRPGMLVEGSVNLERRKLYEWI 420

Query: 427 IHPIT 431
           I P+ 
Sbjct: 421 IDPLF 425


>gi|119357638|ref|YP_912282.1| secretion protein HlyD family protein [Chlorobium phaeobacteroides
           DSM 266]
 gi|119354987|gb|ABL65858.1| secretion protein HlyD family protein [Chlorobium phaeobacteroides
           DSM 266]
          Length = 330

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 78/212 (36%), Gaps = 14/212 (6%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT----ILEKT 286
           R+    +  ML  +  L + A +     +++   D+ + Q   AD   ++     +  + 
Sbjct: 117 RQQYATESAMLAKLRSLLNSAAVS-EFEVEQKKLDVLKLQAQIADLAEQINKQSYMANQA 175

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
              ++I +P+ GT+   Q           Q ++K+VP       RA ++ + I  V +  
Sbjct: 176 TGYESITAPVNGTVFDLQV-KKGTVVSSGQVILKVVP-DDNLTARAYISNQDIGFVFENL 233

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF--SDNNIE 404
              V+   +        K ++  +   +    +++    ++ + +++           I 
Sbjct: 234 PVDVKLDAFPYAEFGDIKGVVTWVGSDVL-APDDIIKYYHFPIKVRLDKQYLDAQGKKIY 292

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
           L++G    +    +  T+        TD + K
Sbjct: 293 LQSGMSVTMNIKVRKRTVMS----IFTDLFSK 320



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 6/141 (4%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  + ++   G I WS +  I++S+ + G++     V  I++   G ++   VE+G +
Sbjct: 25  RAILWVLVLSFFGFIVWSAIAKIDVSIPAMGKLEPTGEVKSIQAAIEGEVRSLFVEDGHR 84

Query: 78  ILQGTPLLTFED---IETTDLIDLKKVSIKNLRCHIDTEKSALDFLN---NKYDVLEKAF 131
           + +G  LL       +     +   ++ + N R    TE + L  L    N   V E   
Sbjct: 85  VKKGDVLLELVPVLSVGEESKLKSLQIGLSNARQQYATESAMLAKLRSLLNSAAVSEFEV 144

Query: 132 ESREEQLLDFLGKYHSTCSKV 152
           E ++  +L    +      ++
Sbjct: 145 EQKKLDVLKLQAQIADLAEQI 165


>gi|261341709|ref|ZP_05969567.1| hypothetical protein ENTCAN_08182 [Enterobacter cancerogenus ATCC
           35316]
 gi|288316071|gb|EFC55009.1| hypothetical protein ENTCAN_08182 [Enterobacter cancerogenus ATCC
           35316]
          Length = 416

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 76/450 (16%), Positives = 147/450 (32%), Gaps = 64/450 (14%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +   K+ + N P  LK +  L I   + L+ +S++     +  + G ++     VE+++ 
Sbjct: 16  NHFSKSYQINAPR-LKAVLALFISFFLCLLIFSVVFNFSETTLARGVLIPAQGDVEVRAR 74

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I  F V  G  + +  PL       + D    +   ++  R  ++ EK        
Sbjct: 75  ESGTIVDFAVRPGDYVKENDPLF----TVSQDYGGKQGSVVQFDRQQMEAEK-------- 122

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                 K  E R + + D +  Y    ++  N     +  S                   
Sbjct: 123 ------KRSEQRIQAIDDSIASYRKNLAQQLNITDRQIAVSR------------------ 158

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           NK   LRALL +        K +  K  VS+ DL++    V  + L L        ++  
Sbjct: 159 NKVKKLRALLKNSTDTYNAWKAISGKGYVSKVDLDKSHNDVLNAQLNLTLEESTILDLEA 218

Query: 243 HINELYDEANLEFANYLKE---ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               L D    +  +  +E   +   + +  R  +   S            ++L+P  G 
Sbjct: 219 RKTSLSDSTQSQIDSLSEEQLYVKNRISEIDRNLSSRGS---------STMSMLAPAEGY 269

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA--KVTPKQIQHVKKGYTATVRFPHYAD 357
           +V    F       Q+  ++ ++  +    +     V    +  V KG    +RF  +  
Sbjct: 270 VVAIN-FPPGRAITQNSEVVVVIRKNTTATMEGYLYVPATGVGRVAKGDKVKLRFDSWPV 328

Query: 358 IREKKFKAIIE-----KIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFP 410
            +     A +       ID   +      + Q YY   +++             L  G  
Sbjct: 329 DKYGSVDATLSDFYEVNIDAHSA-LIPLQEGQNYYLAKVRVPSWFSDPDKKKRLLMGGMT 387

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
                      L   +I P+     ++ +R
Sbjct: 388 VNADIVIDRKPLINLLIAPL----ERVRKR 413


>gi|325335912|gb|ADZ12186.1| Outer membrane efflux protein [Riemerella anatipestifer RA-GD]
          Length = 896

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 65/370 (17%), Positives = 135/370 (36%), Gaps = 42/370 (11%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT----DLIDLKKVSIKNLRC 108
           E     I+SP  G I  + V+NG Q+ +G  LL   +I+       L+   +  I     
Sbjct: 53  EQRPQSIQSPIPGKIIHWYVKNGDQVKKGDTLLRISEIKEDYMDPLLVQRAEDQINAKDN 112

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             D   + +  +  + D +  A E +  Q+   L +         N+ I++    L+   
Sbjct: 113 VRDYYSAKIKTIGGQLDAMNAARELKLNQIRIKLQQ--------LNFKINATNAELQAAN 164

Query: 169 TRMRSIYLN-RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              R      R   E     L +L    +++++    L +KN++        E  + ++ 
Sbjct: 165 NEFRMAEDQYRRQEEMYKQGLVSLTDFQRRNVSYQNALAKKNSI--------ENKLAEAQ 216

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            E+     EQ   ++  NE   +   E    + ++S     +    A   +++T  +  +
Sbjct: 217 QEILSLQVEQNATIQDYNEKISKLEGERFQSMGQVSG----SDGEIAKLQTQVTNYKVRQ 272

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY- 346
            Q  I++   G I            ++ + +  IVP S    +   V+P  +  +++G  
Sbjct: 273 GQYYIIATQDGQITQLSKTGIGEIIKEGENIGIIVPKSVKYAVEFYVSPVDLPLLQEGQK 332

Query: 347 --------TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
                    A V F  + +     F   I  +       +NN+     ++V++  +    
Sbjct: 333 IRCTFDGFPAIV-FSGWPNSSYGTFPGKIIAV-------ENNISQNGMFKVVVVESGDKK 384

Query: 399 SDNNIELRNG 408
              NI++  G
Sbjct: 385 WPPNIKMGAG 394


>gi|194099870|ref|YP_002003007.1| putative secretion protein [Neisseria gonorrhoeae NCCP11945]
 gi|193935160|gb|ACF30984.1| putative secretion protein [Neisseria gonorrhoeae NCCP11945]
 gi|317165335|gb|ADV08876.1| putative secretion protein [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 356

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 124/388 (31%), Gaps = 55/388 (14%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
           VV + S   G I    VE+G+ +  G PL         +          N++  +  E +
Sbjct: 3   VVRVYSSDIGTITHKFVEDGNFVKAGEPLFKLSTSRFGEK--------GNVQAKLAAEAN 54

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
               L                Q L+ L + H    K  +  I  +   L+          
Sbjct: 55  LKKTLA--------------LQELERLKRIHQNEQKNVHNNIHRLNNQLE---------- 90

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
               +++ + +     +   +K L   K L  + AVSQ D    E  + +    L     
Sbjct: 91  ----NIKQQITGQNRQIRLAEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKR 146

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           EQ N +R +    DE  +  ++  +    +L Q  R   +   ++      + ++TI + 
Sbjct: 147 EQNNAIREL----DEQKITLSSLPERHKTELSQLNRAITEMNQEILDF-DLKSEQTIRAS 201

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +G I            + S+ L+ IVP          +  K +  +K      +R+  Y
Sbjct: 202 KSGYISTINVD-IGQQVEPSKLLLSIVPEQTELVANLYIPSKAVGFIKPKDKVVLRYQAY 260

Query: 356 ADIREKKFKAIIEKIDPIISQ-----------QDNNLQTQEYYEVILKITDLAFS--DNN 402
              +       I  +                  +  L  +  Y V +K+          N
Sbjct: 261 PYQKFGHATGEIISVARTALGKQELSGLGIIFTNPTLLNEPAYLVKVKLEKQTIKAYGEN 320

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             L+ G   E     +   L + ++ P+
Sbjct: 321 KPLQIGMILEADILHERKKLYEWVLDPL 348


>gi|218441911|ref|YP_002380240.1| hypothetical protein PCC7424_5019 [Cyanothece sp. PCC 7424]
 gi|218174639|gb|ACK73372.1| hypothetical protein PCC7424_5019 [Cyanothece sp. PCC 7424]
          Length = 496

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 71/464 (15%), Positives = 167/464 (35%), Gaps = 74/464 (15%)

Query: 18  KRMTLLSIIGIIGLITWS-ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +R+ L  I+GI+ +     +   ++     +GE+  ++ V +I  P   I+ +  V+ G 
Sbjct: 24  RRIILWIILGIVTVGISQLVFAKVKPVFYLTGELKGQETVEKILLPQDSILDEIYVKEGE 83

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE-------- 128
           +I +G  LL+F  I +   +   +    +L+  I+  +S ++   N+    E        
Sbjct: 84  KIEKGQTLLSFNVINSLTKLKQLETLQNSLKKEIEFYQSVINNSFNRDQQDEAMTHLKLS 143

Query: 129 --------------KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
                         +  +  ++Q+++   +      ++      +V  S    L+  + +
Sbjct: 144 QEKMALVKSKINLIEEKKRLKDQVVEAKNQVALKLEQLEQLESGNVPNSSADSLSSKQKL 203

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                 L N            +K L  +KNL   +A+S+ +  +QE+++     E+ +  
Sbjct: 204 DQRIEQLRNDLKNAETQQQEEKKRLDTLKNLLANHAISEQEYLEQEQLIQDRQQEINKLR 263

Query: 235 HEQ-----------------------KNMLRHINELYDEA----------NLEFANYLKE 261
            E                        K + + I+   D+             +     +E
Sbjct: 264 LELETFEAVFEPEQTDYNKLLREKNKKELFKQISGQQDQIVLMQKNLVVQEEQSLKIDQE 323

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
             + + +NQ    +  S++ + +K  +   ++SPI+G I                 +++I
Sbjct: 324 FKKIIGENQTKINNINSQIQLYKKRIKAIDLISPISGKISQINLKQP--------QILEI 375

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           +P ++       V  +  Q +KK     V    +   +++  +  I  I   I       
Sbjct: 376 IPENE-LIAEVFVPYENRQLIKKNQKVEVILDEFD--KKQWIRGKIVSIGSDILF---PN 429

Query: 382 QTQEYYEVILKIT----DLAFSDNNIELRNGFPAEVLFTAKNTT 421
           Q   +Y + + I+     +  +  +I L+ G       T +  +
Sbjct: 430 QVYPFYRLPIYISLDKKTIISNHQDITLKPGMRVTAKLTIEEKS 473


>gi|300992108|ref|ZP_07179804.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 45-1]
 gi|47600581|emb|CAE55702.1| microcin H47 secretion protein mchE [Escherichia coli Nissle 1917]
 gi|300406856|gb|EFJ90394.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 45-1]
 gi|307552910|gb|ADN45685.1| microcin H47 secretion protein MchE [Escherichia coli ABU 83972]
          Length = 413

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 65/436 (14%), Positives = 143/436 (32%), Gaps = 56/436 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + L SI+ I   + + I+      V+ SGE+      V I S   G + +  V  G
Sbjct: 14  PLWLIMLGSIVFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQGFVVRQFVHEG 73

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G P+   +  ++T    +     +++   +            + D +    E  +
Sbjct: 74  QLIKKGDPVYLIDISKSTRSGIVTDNHRRDIENQLV-----------RVDKIISRLEESK 122

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  LD L K     +  F      + R+                            +   
Sbjct: 123 KITLDTLEKQRLQYTDAFRRSSDIIQRA-------------------------EEGIKIM 157

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   +N   K  ++++ L  Q  + Y+    L     + +     I  L  +   + 
Sbjct: 158 KNNMENYRNYQTKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQA 217

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++   I +   Q       E+ K  +      +  I +   G +      +        
Sbjct: 218 ADFDNRIYQMELQRY-----ELQKELVNTDVEGEIIIRALTDGKVDSLSV-TVGQMVNPG 271

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI- 373
             L++++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I    
Sbjct: 272 DNLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPAEKFGQFSATVKTISRTP 331

Query: 374 ----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                      + Q+    +  +Y+VI           + N+ L NG  AE     +   
Sbjct: 332 ASTQEMLTYKGAPQNTPGASVPWYKVIAMPEKQIIRYDEKNLPLENGMKAESTLFLEKRR 391

Query: 422 LAQEIIHPITDNWPKI 437
           + Q ++ P  D     
Sbjct: 392 IYQWMLSPFYDMKHSA 407


>gi|332850079|ref|ZP_08432466.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6013150]
 gi|332871477|ref|ZP_08439990.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6013113]
 gi|193078049|gb|ABO12977.2| hypothetical protein A1S_2560 [Acinetobacter baumannii ATCC 17978]
 gi|332730928|gb|EGJ62234.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6013150]
 gi|332731454|gb|EGJ62745.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6013113]
          Length = 421

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 64/433 (14%), Positives = 153/433 (35%), Gaps = 55/433 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P S   +T+ ++   + +I ++I        +  G+++ +  ++++ +  SG I K  
Sbjct: 25  SRPFSFTYLTICALCIALVIIAFAIWGSYTKRSTVQGQLIPQSGLIQVYTTQSGTILKKN 84

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G  + +G  L T       +   +     K  +    + ++ +  +           
Sbjct: 85  VHEGQTVKKGDILFTISTASYGEQGSIADALAKQTQLKEQSIRNEITRMRF--------- 135

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                         H    +  N  I  +  +L              + +EN  +  R  
Sbjct: 136 -------------IHQDEKRTINNQIGLLNGTL--------------VKVENLIANQRER 168

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           ++  +K+     N+  +NA+S  +   ++        +      E+ ++ + + E     
Sbjct: 169 VNLAKKNQQRYGNILHENAISHEEFEARKIDYLDQLAQYESLQREKVSLEKQLTEQ---- 224

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +  +      +  +EQ +R  +    +L I  ++R+   I +  +G I    +     +
Sbjct: 225 QISLSGLENRQNNQIEQLERLLSSNTQEL-IEMQSRQHIAIQANSSGVIGTINA-EVGQF 282

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI- 370
              S+PL+ ++P +     +  V  + I  VK+G    +R+  Y   +    KA +  + 
Sbjct: 283 VDLSKPLLTVLPENTALIAQLYVPSRAIGFVKEGDQVLLRYQAYPYQKFGHAKAQVLSVA 342

Query: 371 -DPIISQQ---------DNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
              + SQ             L  +  Y V  K+         N++ L+ G   E     +
Sbjct: 343 KTALASQDLQTIGIISPQEQLNNEPVYLVRAKLDKQMVKAYGNDMPLQVGMTLEGDIMHE 402

Query: 419 NTTLAQEIIHPIT 431
              L + ++ P+ 
Sbjct: 403 QRKLYEWVLEPLF 415


>gi|16124936|ref|NP_419500.1| HlyD family secretion protein [Caulobacter crescentus CB15]
 gi|13421902|gb|AAK22668.1| HlyD family secretion protein [Caulobacter crescentus CB15]
          Length = 378

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/415 (9%), Positives = 123/415 (29%), Gaps = 52/415 (12%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L ++        +     E  V   G +  +  ++ + +   GI+    V  G +++ G 
Sbjct: 3   LVVLAGATFAATASYARKETVV---GWLTPQAGMIRLAARQGGIVANVHVREGDRVVVGQ 59

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
           P+ T       +  D   V  ++L                       +  +  +  L   
Sbjct: 60  PIATLTLSSALEGGDSFAVLSRSL---------------GAQSSAAGSRAAATQAALAAE 104

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            +  +      N  ++   RSL ++  R                     L+  + ++   
Sbjct: 105 SRQLTQRRAALNRELAEAKRSLALQTER---------------------LTLARAEVARA 143

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + +  +  +S  +L  +      + L +++      +          E +   A    ++
Sbjct: 144 ETIAAQGFLSPRELQARR----SAELAVQQEASTLSSQALSYERQIGEVDARLAAIPIDL 199

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
                +   T A    + T +E    +  +++ +AG +       +         +  + 
Sbjct: 200 QAARAEAASTLAGLEQQATQVEAQ-GRYVVVATVAGRVAALPV-EAGQTVGVGAAVAVLT 257

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P             +    V++G    + +  +   +    + ++  +   +        
Sbjct: 258 PGDSALVAELYAPSRAAGFVRQGQEVRLMYQAFPHQKFGVGEGVVTAVSRTVLAPSEVAI 317

Query: 383 T-----QEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                 +  + + +K+   ++A     + L+ G            +L + ++ P+
Sbjct: 318 PGLQVQEPVFRIRVKLARDNVAAYGETLPLQPGMLLSADVVIDRRSLLEWLLDPL 372


>gi|196039249|ref|ZP_03106555.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|196029876|gb|EDX68477.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
          Length = 455

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 69/450 (15%), Positives = 166/450 (36%), Gaps = 48/450 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L++N P  +K    L +  II  + WS    I+IS   S  I +    + +K   SG I 
Sbjct: 18  LEKNPPKFIKLFIYLVLTIIISALIWSYFSKIDISAKGSATIQSSTATIAVKPKVSGEIN 77

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             +++ G ++ +G PL+   + +    ++ +K  ++  R  +D    +L  L +  D  +
Sbjct: 78  DIKIKQGEKVRRGDPLIGINNKQ----LEQEKKHLEENRDKLDAGIKSLKILKDVIDKNQ 133

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSL 187
                  E+ +      +     + N    +       +L  +  +    + +LE +   
Sbjct: 134 SKLPIDVEESIRNELDSYLKQKTLLNNENKNKIVDFTHRLQGLNHVKDEGINNLEFEIES 193

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI-----VYKSTLELRENIHEQKNMLR 242
           ++   +  + +      L ++N + +N+   QE       V +   +++ N         
Sbjct: 194 IKNQNNILKIEKEG---LLKQNKIIKNENIAQETEANVNKVNQLDSQIQGNQKSILIKQE 250

Query: 243 HINELYDEANLE----------------------FANYLKEISRDLEQNQRTFADEMSKL 280
            I     E  LE                       A+ + +I++++++ Q+  +     +
Sbjct: 251 QIKNRVQEIELEKKVINENIRAQESSIQDSIESLKASKVSDIAKEIDEKQQQLSLLQQDI 310

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
             +    EQ  I +P  G I         +  +Q + ++ I P      +   ++ ++I 
Sbjct: 311 NNINLNYEQTVITAPKDGVIEMPNRIKVGDTIEQDKEVLSISPDENTNRVLLYISAEEIN 370

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAF 398
            +K G    +++  +     + +   + +I  DP+ S+  +      ++ V   I +   
Sbjct: 371 KIKIGDK--IKYT-FEVGTTETYHGNVVQIYHDPVTSKNRDTT----FFVVEGTIENTG- 422

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
              N +LR+G   +         +   ++ 
Sbjct: 423 ---NKKLRSGSTGKAAIVVDQKNVLSLMLE 449


>gi|322836437|ref|YP_004215814.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
 gi|321170990|gb|ADW76687.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
          Length = 424

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 65/449 (14%), Positives = 146/449 (32%), Gaps = 61/449 (13%)

Query: 6   WKNLKRNHPA-SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           W+      P        LL ++ I   +T+ I +     V+ +GEI     V  + S   
Sbjct: 14  WRGRALLLPGIPFWVTALLCLLFITTFLTFVIAVNYTRRVNVTGEISTYPRVANVYSGVQ 73

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++ K  V  G  I  GTP+   +  ++T                    +S +   N + 
Sbjct: 74  GVVVKEFVTEGQVIKTGTPIYQIDVSKST--------------------RSGVVSDNQRR 113

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D+ ++    R  Q++D L        ++     +    +L+     +R            
Sbjct: 114 DIDDQL--ERITQIIDRLDSSKKDTVEMLEKQKAQYTVALQRSTDILRRA---------- 161

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  L   ++++   +    K  ++++ L  Q  + Y+    L     + +     I
Sbjct: 162 ----EEGLRIMKENMENYRQYQTKGLINKDQLTNQVALYYQQQNNLLGLTGQNEQNSLQI 217

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             L  + + + + +  +I    +   + +  +  +L I         + + + G +    
Sbjct: 218 TALESQIHTQASEFDNQI---YQMELQRYELQKERLNI--DAGGTIIVRALVDGRVDSLS 272

Query: 305 SFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +          L++++P         +   V    I ++  G    +R+  +   +  
Sbjct: 273 V-TVGQMVNVGDSLLQVIPPCIDHYSLVL--WVPNDAIPYISPGDRVNIRYEAFPSQKFG 329

Query: 362 KFKAIIEKIDPIISQQDNNLQTQ-----------EYYEVILKITDLAF--SDNNIELRNG 408
           +F   +  I    +     L  Q            YY+VI++        +   + L NG
Sbjct: 330 QFAGTVSVISRAPASPQEMLTYQGAPKPALTSAVPYYKVIVRPEKQTIMYNGKRLNLENG 389

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
             AE     +   + Q ++ P  D     
Sbjct: 390 MKAESTLFLEKRKIYQWMLSPFYDMKHSA 418


>gi|228930586|ref|ZP_04093567.1| hypothetical protein bthur0010_52520 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228828982|gb|EEM74638.1| hypothetical protein bthur0010_52520 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 435

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/431 (12%), Positives = 147/431 (34%), Gaps = 28/431 (6%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEI-----LNEDNVVEIKSPF 63
           L+R  P  +    +  ++ +   + WS +  ++I    +  I     ++      +    
Sbjct: 17  LERKPPRFIAGFIIFLLMSLFTFLIWSYIGRVDIVSKGTAMIQGKSEISVSRTQIV---- 72

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G++    V++G ++ +G  LL  ++ E TD  +     I++L    +        + + 
Sbjct: 73  -GVVDTVAVKSGDEVKKGDILLQLKNQELTDKQNQTDQIIQHLEKQREMLVQLKTSIQSH 131

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS--LKMKLTRMRSIYLNRLDL 181
                   + + ++      + + +        I+ +  S  L  +   ++ + + + ++
Sbjct: 132 SPSFSNKVDKKIKEEYQAYEQGYKSLQTEKENEINIIDDSKLLNEQDEVLQGLIVEKDNV 191

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   +    +         + L +K    ++  N  E+ + +    L    +E+K + 
Sbjct: 192 QLEIESIERQKNKDNIPEEQKQLLTDKITSLKSQTNSIEKRIKQRKETLE---YERKKVD 248

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEM----SKLTILEKTREQKTILSPIA 297
                  +E       Y ++    + Q  ++   E+     +L  L    E  TI +   
Sbjct: 249 VAKEGKKEEKKNALNRYKEDAVISINQRIQSLEQELFINKQELDGLHHQSETTTIKAQKD 308

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G + +       +     Q ++ IVP      ++  +  ++I+ +KKG    +++  +  
Sbjct: 309 GIVHFPSIVQQGDLIDPGQDVVSIVPKELEKKVKILLPAQEIKEIKKGDK--IQYS-FKL 365

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
               K    +  +        +    +  YE+   I          EL  G         
Sbjct: 366 KNTDKQLGRVIYVSAH--PIFDKNAKEYMYEIEATIDTQELQ----ELHTGMIGSASVIT 419

Query: 418 KNTTLAQEIIH 428
               + + ++ 
Sbjct: 420 GEEPVWKFLLR 430


>gi|26247105|ref|NP_753145.1| microcin H47 secretion protein [Escherichia coli CFT073]
 gi|227888129|ref|ZP_04005934.1| microcin H47 secretion protein [Escherichia coli 83972]
 gi|26107505|gb|AAN79688.1|AE016758_292 Microcin H47 secretion protein [Escherichia coli CFT073]
 gi|227834896|gb|EEJ45362.1| microcin H47 secretion protein [Escherichia coli 83972]
          Length = 424

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 65/436 (14%), Positives = 143/436 (32%), Gaps = 56/436 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + L SI+ I   + + I+      V+ SGE+      V I S   G + +  V  G
Sbjct: 25  PLWLIMLGSIVFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQGFVVRQFVHEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G P+   +  ++T    +     +++   +            + D +    E  +
Sbjct: 85  QLIKKGDPVYLIDISKSTRSGIVTDNHRRDIENQLV-----------RVDKIISRLEESK 133

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  LD L K     +  F      + R+                            +   
Sbjct: 134 KITLDTLEKQRLQYTDAFRRSSDIIQRA-------------------------EEGIKIM 168

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   +N   K  ++++ L  Q  + Y+    L     + +     I  L  +   + 
Sbjct: 169 KNNMENYRNYQTKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQA 228

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++   I +   Q       E+ K  +      +  I +   G +      +        
Sbjct: 229 ADFDNRIYQMELQRY-----ELQKELVNTDVEGEIIIRALTDGKVDSLSV-TVGQMVNPG 282

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI- 373
             L++++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I    
Sbjct: 283 DNLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPAEKFGQFSATVKTISRTP 342

Query: 374 ----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                      + Q+    +  +Y+VI           + N+ L NG  AE     +   
Sbjct: 343 ASTQEMLTYKGAPQNTPGASVPWYKVIAMPEKQIIRYDEKNLPLENGMKAESTLFLEKRR 402

Query: 422 LAQEIIHPITDNWPKI 437
           + Q ++ P  D     
Sbjct: 403 IYQWMLSPFYDMKHSA 418


>gi|325475704|gb|EGC78880.1| bacteriocin ABC transporter [Treponema denticola F0402]
          Length = 346

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 62/402 (15%), Positives = 129/402 (32%), Gaps = 69/402 (17%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
              + I   +E  V + G++    N+  +K+  +G I +     G +I +G  L+  +D 
Sbjct: 4   AFLYCIFGKMEEVVYAKGQVRPVQNISLVKNIIAGEIVQINYLTGQKIEKGAELVKIDD- 62

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                               +  ++  D +N K + L+           D +  YH+  +
Sbjct: 63  -------------SIYSARKEALQAYYDEINKKIEGLK-----------DLIKSYHADKN 98

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     S+  R           +Y+N  ++  K   +   L     +L          A
Sbjct: 99  LISKTDSSTYARFR---------VYVNEKEILTKRYNMVKKLWLEALELPAT-------A 142

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q  L + +     + L+L            + N+  +    E  N+L E  +      
Sbjct: 143 IQQAQLRELKYKADMAELDL----------TTYKNKFINSLLSELDNFLIEKEK------ 186

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTY 329
                  S+L     + +   I SPI+G +    S +  +Y    Q ++ IVP       
Sbjct: 187 -----IYSQLKDANLSLKNTCIRSPISGYVQEISSLNKGDYINAGQSILNIVPDGTDNYK 241

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I  +V  K    + +      RF  +           +  I+P      +      Y+ V
Sbjct: 242 IEIRVPAKDAGKITEKMKIKYRFTAFPYHEFGGGTGEVVNIEPDSFVARD---GSVYFAV 298

Query: 390 ILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIH 428
              +      D   +   ++ GF  +     +  ++    + 
Sbjct: 299 TGTLDKNVLLDKEKKEYFVKPGFEIDARIILREQSILWHFLK 340


>gi|319789838|ref|YP_004151471.1| secretion protein HlyD family protein [Thermovibrio ammonificans
           HB-1]
 gi|317114340|gb|ADU96830.1| secretion protein HlyD family protein [Thermovibrio ammonificans
           HB-1]
          Length = 388

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 130/389 (33%), Gaps = 52/389 (13%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E +   ++S + G + K   + G  + +G PL   +  E    +   + + K        
Sbjct: 31  EGDPYLVESKYPGKVVKLMCDEGDSVEKGQPLAELDSKELNARLKEAEAAYKAALSAWRA 90

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           ++  +  L               E+  D L +  S  +       SS  + ++     + 
Sbjct: 91  KEQEVAAL---------------ERQADSLRERISELTSAVPLQTSSAEKEVEALEGELH 135

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +       LE + S L A     ++D    + L+ +  +SQ+   Q +     +   LR 
Sbjct: 136 A-------LEAQKSSLAATFWKAERDYKRFEALYRRRVISQSRYEQAKVAYENAKASLRA 188

Query: 233 NIHEQKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADE---MSKLTIL 283
              + + +   +    ++  L      E A+  KE++  LE+ +   A+      K    
Sbjct: 189 VEGKIEALKSQLAAAREKVKLSRTRWKEVASLKKELASLLERLKAALAEAKGYRHKAASA 248

Query: 284 EKTREQK-------TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
           +   E+         I SP+ G +V  +           +PL  I   +   Y    V  
Sbjct: 249 KAVVERVKAMLSDMVIRSPVNG-VVAEKLVEPGEVVAPGRPLFVIYNLN-RLYFEGFVPE 306

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVIL 391
           K+I  +  G    V    Y     KKF  ++  +           Q    + +E + V L
Sbjct: 307 KEIGLIHLGQRGYVVVDSYP---GKKFPVVVTYVATKAEFTPKEVQTKEERVKEVFRVKL 363

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           ++      +    L+ G P +     +  
Sbjct: 364 RL----LENPRHLLKPGMPTDCYVYLERK 388


>gi|296100450|ref|YP_003610596.1| hypothetical protein ECL_00079 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295054909|gb|ADF59647.1| hypothetical protein ECL_00079 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 416

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 75/450 (16%), Positives = 148/450 (32%), Gaps = 64/450 (14%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H   K+ + N P     +TL      + L+ +SI+     +  + G ++     VE+++ 
Sbjct: 16  HHFSKSYEINAPRLKGVLTLFISF-FLCLLVFSIVFNFSETTLARGVLIPAQGDVEVRAR 74

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I  F V  G  + +  PL       + D    +   ++  R  ++ EK        
Sbjct: 75  ESGTIVDFAVRPGQYVKENDPLF----TVSQDYGGKQGSVVQFDRQQMEAEK-------- 122

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                 K  E R + + D +  Y    ++  +     +  S                   
Sbjct: 123 ------KRSEQRVQTIEDSIATYRKNLAQQLDIADRQIVVSR------------------ 158

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           +K   LRALL +        K +  K  VS+ DL++    V  + L L        ++  
Sbjct: 159 DKVKKLRALLKNSTDTYEAWKAISGKGYVSKVDLDKSHNDVLNAQLNLTLEESSILDLEA 218

Query: 243 HINELYDEANLEFANYLKE---ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               L D    +  +  +E   +   + +  R  +   S             +L+P  G 
Sbjct: 219 RKTSLTDSTQSQIDSLSQELLYVKNRISEIDRNLSSRGSSTMA---------MLAPADGY 269

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA--KVTPKQIQHVKKGYTATVRFPHYAD 357
           +V    F       Q+  ++ ++  +    +     V    +  V KG    +RF  +  
Sbjct: 270 VVAIN-FPPGRAITQNSEVVVVIRKNTAASMEGYLYVPATGVGRVAKGDKVKLRFDSWPV 328

Query: 358 IREKKFKAIIE-----KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFP 410
            +    +A +       ID   +      + Q YY   +++       +N +  L  G  
Sbjct: 329 DKYGSVEATLSDFYEVNIDAHSA-LIPLQEGQNYYLAKVRVPSWFTDPDNKKRLLMGGMT 387

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
                      L   +I P+     ++ +R
Sbjct: 388 VNADIVIDRKPLINLLIAPL----ERVRKR 413


>gi|76810719|ref|YP_334990.1| secretion protein [Burkholderia pseudomallei 1710b]
 gi|76580172|gb|ABA49647.1| secretion protein, putative [Burkholderia pseudomallei 1710b]
          Length = 603

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/401 (12%), Positives = 127/401 (31%), Gaps = 58/401 (14%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +  G +  +  +V++ +  +G++ K  V  G  + +G  L T                 
Sbjct: 240 TTVDGVLTPDTGLVKVYAQQTGVVLKKNVVEGQHVTRGQVLYTVST-------------- 285

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                D+   A    +  L++   +  ++  +  +         
Sbjct: 286 ---------------------DLQSAAAGQTQAALIEQAQQRKTSLQQELDKTRRLQQDE 324

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                +++ S+      ++++ +  R   S      +    L  ++ +S++   Q++  +
Sbjct: 325 RDTLQSKIASLRTELAGIDDQIAAQRTRASIAADAASRYAGLLAQDYISKDQAQQRQADL 384

Query: 224 YKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                +L   + ++ +  + + E  ++    +L+  N L +I R +    RT  +  +K 
Sbjct: 385 LDQRSKLNSLMRDRASTAQSLKEALNDLSGLSLKQQNQLSQIDRSVIDVDRTLIESEAK- 443

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                   +  + +P  GT            A  S PL  IVP          V    + 
Sbjct: 444 -------REFVVTAPETGTATAV-IAEPGQTADTSHPLASIVPTGAHWQAYLFVPSAAVG 495

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN---------NLQTQEYYEVIL 391
            V  G    VR+  Y   +  +++A +  I                     +  YY + +
Sbjct: 496 FVHVGDRVLVRYQAYPYQKFGQYEASVVSIARTALSAAELATSGGPAAQTASGTYYRITV 555

Query: 392 KITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +             L+ G   +     +   L + ++ P+
Sbjct: 556 ALNSQNVMAYGRAQPLQAGMALQADVLQERRRLYEWVLEPL 596


>gi|15808047|gb|AAL08401.1| MceH [Klebsiella pneumoniae]
          Length = 413

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 70/447 (15%), Positives = 149/447 (33%), Gaps = 57/447 (12%)

Query: 6   WKNLKRNHPA-SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           W+      P   L    L SI  I   +T+ I       V+ SGE+      V I S   
Sbjct: 3   WRGRAILLPGIPLWLTMLGSIAFITAFLTFVIAGTYSRRVNVSGEVTTWPRAVNIYSGVQ 62

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V  G  I +G P+   +  ++T    +     +++   +            + 
Sbjct: 63  GFVVRQFVHEGQSIKKGDPIYQIDVSKSTRSGVVTDNQRRDIENQLV-----------RV 111

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D +    E  ++  L+ L K H   S  F      + R+                     
Sbjct: 112 DNIISRLEESKKITLNTLEKQHLQYSDAFRRSSDIIRRA--------------------- 150

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  +   + ++   +N   K  ++++ L  Q  + Y+    L     + +     I
Sbjct: 151 ----EEGIKIMKNNMENYRNYQLKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQI 206

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             L  +   + A++   I +   Q       E+ K  I      +  I +   G +    
Sbjct: 207 TSLESQIQTQAADFDNRIYQMELQRY-----ELQKELIDTDVGGEIIIRALSDGKVDSLS 261

Query: 305 SFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             +          L++++P + +  Y+   V    + ++  G    +R+  +   +  +F
Sbjct: 262 V-TVGQMVNAGDSLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPAEKFGQF 320

Query: 364 KAIIEKIDPI-----------ISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFP 410
            A ++ I               + Q+    +  +Y+VI+K     +++   ++ L NG  
Sbjct: 321 SATVKTISRTPASTQEMLTYKGAPQNTLGTSVPWYKVIVKPEKQIISYGGKSLPLENGMK 380

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKI 437
           AE     +   + Q ++ P  D     
Sbjct: 381 AESTLFLEKRRIYQWMLSPFYDMKHSA 407


>gi|268685893|ref|ZP_06152755.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
 gi|268626177|gb|EEZ58577.1| conserved hypothetical protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 424

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 68/438 (15%), Positives = 135/438 (30%), Gaps = 55/438 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S    T  + I  + +I + I        +  G+IL    V+ + +P +G I    
Sbjct: 28  TRPLSFSLWTTFASISALLIILFLIFGNYTRKTTMEGQILPASGVIRVYAPDTGTITAKF 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE+G ++  G  L             +++         + TE      L           
Sbjct: 88  VEDGEKVKAGDKLFALSTSRFGAGGSVQQ--------QLKTEAVLKKTLA---------- 129

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               EQ L  L   H   ++     +  +                 +L +  +    +  
Sbjct: 130 ----EQELGRLKLIHENETRSLKATVERLENQ--------------KLHILQQIDGQKRR 171

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   ++ L   + L   +AVS+ +    E  + +   +L     E+  +L+ I       
Sbjct: 172 IRLAEEMLRKYRFLSANDAVSKQETMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ---- 227

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           NL  A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +      
Sbjct: 228 NLTLASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQ 285

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S+  + IVP     Y    +       +K      +R+  Y   +       +  + 
Sbjct: 286 VDPSKLFLSIVPERTELYTHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVA 345

Query: 372 PIISQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAK 418
                +                 +  Y V +K      +       L+ G   E     +
Sbjct: 346 KTALGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHE 405

Query: 419 NTTLAQEIIHPITDNWPK 436
              L + ++ PI     +
Sbjct: 406 KRRLYEWVLEPIYSMSGR 423


>gi|42526234|ref|NP_971332.1| bacteriocin ABC transporter, bacteriocin-binding protein, putative
           [Treponema denticola ATCC 35405]
 gi|41816346|gb|AAS11213.1| bacteriocin ABC transporter, bacteriocin-binding protein, putative
           [Treponema denticola ATCC 35405]
          Length = 380

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 122/385 (31%), Gaps = 71/385 (18%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W     ++ +V +SG +  + N    K+ +SG +K  + ++GS+I +G  LL  E  +  
Sbjct: 41  WICFAEMDQTVKASGILRLKTNTSIGKAAYSGTVKSKKFKSGSRIKKGDILLILETADIE 100

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV- 152
           +     +  I  L   I                           LL +    HS  + V 
Sbjct: 101 EDKTNTENEIHRLNKEI-------------------------NNLLLYEKAVHSDKNNVP 135

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
             + I+     +                   K   LR      +++    K L       
Sbjct: 136 LEHAIAKARAEIYF----------------AKKEKLRIFYEEAKEEYAHEKEL------- 172

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
                       K+   L     + K           +  +   +    +++ LE  ++T
Sbjct: 173 --------PSSMKTKKSLSSLFDKFKIAELDYKTFSAQEIINIESEKNLLTQKLESAKKT 224

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIR 331
                  LT L K   +  I+SP+ GT+      +  +Y      +++I+P   +     
Sbjct: 225 -------LTRLNKEISESKIISPLNGTVEELIRINEGDYIFSGTEILRIIPDMIEELKAE 277

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             ++ K I  +K G    ++F           K +I  I        NN  T  ++ V  
Sbjct: 278 LIISDKDIAELKIGMEVNLKFTALPPSEYGVLKGVITNISNDSF---NNQNTSSFFLVDA 334

Query: 392 KITDLAFS---DNNIELRNGFPAEV 413
            I   +        ++L+ G   E 
Sbjct: 335 DILSFSLKNNEQKEVKLKPGMSTEA 359


>gi|42525942|ref|NP_971040.1| bacteriocin ABC transporter, bacteriocin-binding protein, putative
           [Treponema denticola ATCC 35405]
 gi|41815992|gb|AAS10921.1| bacteriocin ABC transporter, bacteriocin-binding protein, putative
           [Treponema denticola ATCC 35405]
          Length = 383

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 61/413 (14%), Positives = 133/413 (32%), Gaps = 70/413 (16%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + ++  + +   + + I   +E  V + G++    N+  +K+  +G I +     G +I 
Sbjct: 31  IYIIGSLMLFAFL-YCIFGKMEEVVYAKGQVRPVQNISLVKNIIAGEIVQINYLPGQKIE 89

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L+  +D                     +  ++  D +N K + L+   +S      
Sbjct: 90  KGVELVKIDD--------------SIYSARKEALQAYYDEINKKIEGLKNLIKSYHAD-K 134

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           + + K  S+    F                    +Y+N  ++  K   +   L     +L
Sbjct: 135 NLISKTDSSTYARFR-------------------VYVNEKEILTKRYNMVKKLWLEALEL 175

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                     A+ Q  L + +     + L+L            + N+  +    E  N+L
Sbjct: 176 PAT-------AIQQAQLRELKYKADMAELDL----------TTYKNKFINSLLSELDNFL 218

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E  +             S+L     + +   I SPI+G +    S +  +Y    Q ++
Sbjct: 219 IEKEK-----------IYSQLKDANLSLKNTCIRSPISGYVQEISSLNKGDYINVGQSIL 267

Query: 320 KIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            IVP       I  +V  K    + +      RF  +           +  I+P      
Sbjct: 268 NIVPDGTDNYKIEIRVPAKDAGKIMEKMKIKYRFTAFPYHEFGGGTGEVVNIEPDSFVAR 327

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTAKNTTLAQEIIH 428
           +      Y+ V   +      D   +   ++ GF  +     +  ++    + 
Sbjct: 328 D---GSVYFAVTGTLDKNVLLDKEKKEYFVKPGFEIDARIILREQSILWHFLK 377


>gi|53723962|ref|YP_104334.1| secretion protein [Burkholderia mallei ATCC 23344]
 gi|52427385|gb|AAU47978.1| secretion protein, putative [Burkholderia mallei ATCC 23344]
          Length = 603

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/401 (12%), Positives = 127/401 (31%), Gaps = 58/401 (14%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +  G +  +  +V++ +  +G++ K  V  G  + +G  L T                 
Sbjct: 240 TTVDGVLTPDTGLVKVYAQQTGVVLKKNVVEGQHVTRGQVLYTVST-------------- 285

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                D+   A    +  L++   +  ++  +  +         
Sbjct: 286 ---------------------DLQSAAAGQTQAALIEQAQQRKTSLQQELDKTRRLQQDE 324

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                +++ S+      ++++ +  R   S      +    L  ++ +S++   Q++  +
Sbjct: 325 RDTLQSKIASLRTELAGIDDQIAAQRTRASIAADAASRYAGLLAQDYISKDQAQQRQADL 384

Query: 224 YKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                +L   + ++ +  + + E  ++    +L+  N L +I R +    RT  +  +K 
Sbjct: 385 LDQRSKLNSLMRDRASTAQSLKEALNDLSGLSLKQQNQLSQIDRSVIDVDRTLIESEAK- 443

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                   +  + +P  GT            A  S PL  IVP          V    + 
Sbjct: 444 -------REFVVTAPETGTATAV-IAEPGQTADTSHPLASIVPTGAHWQAYLFVPSAAVG 495

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN---------NLQTQEYYEVIL 391
            V  G    VR+  Y   +  +++A +  I                     +  YY + +
Sbjct: 496 FVHVGDRVLVRYQAYPYQKFGQYEASVVSIARTALSAAELATSGGPAAQTASGTYYRITV 555

Query: 392 KITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +             L+ G   +     +   L + ++ P+
Sbjct: 556 ALNSQNVMAYGRAQPLQAGMALQADVLQERRRLYEWVLEPL 596


>gi|312890738|ref|ZP_07750271.1| secretion protein HlyD family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311296785|gb|EFQ73921.1| secretion protein HlyD family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 428

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 77/432 (17%), Positives = 156/432 (36%), Gaps = 27/432 (6%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIK 60
           H      +    P+ L R  ++    I+ LI   S  +     + S  +I + +    I 
Sbjct: 12  HSEEIDEIIAAPPSWLIRWGMIVFFAILVLILALSEFISYPDVIISKLKINSLNAPKSIS 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG + K  V+    ++ G PL   E             S+  L   +    +  + L
Sbjct: 72  PRVSGKLIKLLVKENEDVISGQPLGYIESTA-------DHKSVLQLLSELKV--AQKNAL 122

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS----VYRSLKMKLTRMRSIYL 176
             +Y       +S   QL +    Y         Y  S+      +   +    +  I  
Sbjct: 123 VTRYFTFLALPDSEVYQLGELQKNYEIFYQSYLTYKASTGNGFYLKQRSLLQKDLSDILK 182

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            R +L ++ +L    +S   ++  M K LFE+   ++ +LN+QE I + S + + +    
Sbjct: 183 ERENLTSQKALQDKQVSLATQEYEMHKRLFEQKVEAKMELNRQEAIFFSSQVPVAQIKSS 242

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                   +    E  LE   ++ E      Q+  +       ++ +E  + Q  + +P 
Sbjct: 243 ILTNYSDYSTKQKEI-LEIDRHIGESKTLFLQSLNSL------ISDIENWKSQYILCAPE 295

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G ++++ +   + +   SQ L+ I   S+  +    +    +  V+ G    ++   Y 
Sbjct: 296 SGKVIFSLALQENQFVNPSQELLYIHSGSQDFFGEMPIPQFNMGKVEAGQDVLIKLKGYP 355

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                  +  I  I  +  +    + T     V  KI +L     +I ++NG  A+    
Sbjct: 356 YQEYGIVRGKIYFITDVPLKDSIFMST-----VKFKIQNL-PKHKSITIKNGMEADAEII 409

Query: 417 AKNTTLAQEIIH 428
             NT+L   I+ 
Sbjct: 410 TSNTSLLSRILK 421


>gi|326799307|ref|YP_004317126.1| secretion protein HlyD [Sphingobacterium sp. 21]
 gi|326550071|gb|ADZ78456.1| secretion protein HlyD family protein [Sphingobacterium sp. 21]
          Length = 394

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 58/417 (13%), Positives = 134/417 (32%), Gaps = 66/417 (15%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           H    + + L  +  I+        + + +SV+  G + +      IK+P SG I +  V
Sbjct: 23  HNNRSRIIYLTVLFAILAAFISLFFIRVSVSVNGGGILTSATERNTIKAPVSGRIDQVFV 82

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           +   ++  G  L        T++++ +   +      +    S L+ L            
Sbjct: 83  KLNQEVKAGDTLFRI----QTNILEEQSGYLSKRSAELHQRISDLEKLT----------- 127

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
                                          L   ++ ++S+ L+      + +L R   
Sbjct: 128 ------------------------------QLGNSVSTIKSLPLSSPLYRQQFNLYRQQY 157

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
                 L   + ++++N                S  E  +   + K  L     L ++  
Sbjct: 158 LEAHLQLDNARTIYQRN-------KTLHEKKVLSDAEFDKFNFDYKTALSKQKLLEEQQI 210

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            ++   L  +  +L +         S+    ++ R+  T+ +PI G++      S  N+ 
Sbjct: 211 SQWHTDLNHLRTELME-------LSSQNEKFKQERDLYTVKAPIDGSLQQLNGISPGNFV 263

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              + ++++ P S        V PK I  ++      ++   +        KA +  I  
Sbjct: 264 SAGESVVELSPSSG-LIATVNVAPKDIGLLQLHMPVNLQIDAFNYNEWGMAKANVIDISK 322

Query: 373 IISQQDNNLQTQEYYEVILKITDLA---FSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            +    +       ++V  K+ + +    +     L+ G   +  F     TL Q +
Sbjct: 323 DVYLSQD---RMPMFQVKCKLKNHSLYLMNGYEGRLKKGMSFQARFQVTKRTLFQLL 376


>gi|126663191|ref|ZP_01734189.1| hypothetical protein FBBAL38_07555 [Flavobacteria bacterium BAL38]
 gi|126624849|gb|EAZ95539.1| hypothetical protein FBBAL38_07555 [Flavobacteria bacterium BAL38]
          Length = 448

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 56/400 (14%), Positives = 133/400 (33%), Gaps = 30/400 (7%)

Query: 17  LKRMTLL--SIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQ 71
           +K+   +   ++ +   + W        +VS  G +           I++   G I+K+ 
Sbjct: 33  IKKTIWVLGILLLVFLFLPW------TQNVSGQGSVTTLKPNQRPQAIQTIIGGRIEKWY 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLI-DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           V+ G  + +G  ++   + +   L  DL + +   ++   +   S  D +    + +   
Sbjct: 87  VQEGDFVKKGDTIIFISETKEDYLDPDLVENTGNQVKAKENAAISYSDKVLALENQMSAI 146

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              +  +L     K      KV +  I   + + K +L   R+ Y   ++LE +   L+ 
Sbjct: 147 QNEKNLKLKQAQNKLKQAYLKVQSDSID--FEASKTQLKIARTQYNRSVNLEKE--GLKP 202

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
           +    +K + +      K    +N     +  V  +T+EL             I+  Y E
Sbjct: 203 MTDVEEKRMKLQDT-EAKIITQENKYITSKNEVLNATMELN-----------RISAEYAE 250

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            N + ++  +         +       ++    +       I +P  G +          
Sbjct: 251 KNAKASSDKQTALSSQFDTEAQVNKLKNQYKNYQIRNGMYYITAPQDGYVNRALQSGIGE 310

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA-IIEK 369
             ++   ++ I+P +    +   + P     + KG    V F  +  I    +       
Sbjct: 311 TIKEGTSVVSIMPANFEIAVETYIDPVNFPLINKGEKVRVWFDGWPTIVFSGWPGASFGT 370

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNG 408
              +I  ++N +     Y V++            + +  G
Sbjct: 371 FGGVIVAKENFISQNGKYRVLIAPDPQDKKWPKQLSIGAG 410


>gi|228918565|ref|ZP_04082007.1| hypothetical protein bthur0012_57010 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228841090|gb|EEM86290.1| hypothetical protein bthur0012_57010 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 404

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 53/410 (12%), Positives = 143/410 (34%), Gaps = 20/410 (4%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           + ++    W+ +  ++I    +  +  + N+  I++   GI+    V++G ++ +G  LL
Sbjct: 1   MCLLVFAIWAYVSKVDIVSKGTAIVEGKSNISTIRTQIVGIVDAISVQSGDEVKKGDTLL 60

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ++ E  D    K+  +  +  H++ +K  L+ L       + +F    ++ +    K 
Sbjct: 61  QLKNQELMD----KQNQMDQIIKHLEGQKEMLEQLKKSIQSHKLSFSDEVDKKIREEYKA 116

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS-HQKDLTMMKN 204
           +    +       +    +           + +  +  K ++ R + S   QKD   + +
Sbjct: 117 YEQGYQSLQNEKENEINLIVNSKLSNEQDEILQGLIAEKENIQREIKSINKQKDKENILD 176

Query: 205 LFEKNAVSQNDLNQ-QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-- 261
             ++    +    + Q+  + K   + +E +  ++  +    E   E      N  KE  
Sbjct: 177 EQKQVLDDRIQYLESQQNNIEKRIGQRKETLDSERKKVDTTKEGKQEQKEYALNQYKEST 236

Query: 262 ---ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
              +++ ++  ++    +    + L    E   I +   G + +       +     Q +
Sbjct: 237 IVSVNQRIQSLEQEIFMKKQDFSGLHNQNETMIIKAQQDGVVQFPSILQPGDLIDPGQEV 296

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + I+P      ++  ++ ++I+ +KKG         +      K    +  I        
Sbjct: 297 VSIIPKEDEKKVKILLSAEEIKGIKKGDKVQ---YSFKLKETDKQMGKVMYIPAHPIFDK 353

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           ++       E  +   +L       EL  G             + + I+ 
Sbjct: 354 DSKAYVYELEATIDTQELY------ELHTGMVGRASVVTGEEPIWKFILR 397


>gi|332708772|ref|ZP_08428743.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
 gi|332352314|gb|EGJ31883.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
          Length = 479

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 65/382 (17%), Positives = 133/382 (34%), Gaps = 41/382 (10%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     +  L+I G+IG + WSI+  I I+V+  G ++N   VV+++SP SG ++   + 
Sbjct: 32  PVDWLPLGGLAIFGLIG-VLWSIVGTIPITVTGKGVLINPRRVVQLESPISGQLESLTIR 90

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE-KAFE 132
            G  + +   L   +  +    +  ++  +  L+  I    + +  L  +   LE  A  
Sbjct: 91  TGQCVKKDDILGIIDPSDLKQQLQQQRDKLAQLKQQI----AKITLLRQQRTQLETTAIT 146

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +    L   L    +   ++ N G++S              I      L+ +      L 
Sbjct: 147 AERTSLQQRLRDTETLTPQLQNQGLTS--------------ILSQHRSLQQQLKDAEELT 192

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL-----------------ELRENIH 235
              Q+ L   ++L ++ A+S   + Q E+   ++                   EL++   
Sbjct: 193 PILQQRLAKQRDLQKQGAISSERILQAEQDYRETRQTISEIQAQLQQLQVQETELQQKYL 252

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR-EQKTILS 294
           E  N +  I    ++ +       ++       +     D    +  L+K   +   I S
Sbjct: 253 ENINSITQIKAELEKLDTRSKQLEQDNLEATNTDNNQIQDIQQAIARLQKEVADNSIIKS 312

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKI-VPHSKLTYIRA-KVTPKQIQHVKKGYTATVRF 352
           P  G I+   + +   Y     PL  +  P      I       +  + ++ G    +  
Sbjct: 313 PHTGCILEITA-TVGQYLNPGNPLGTLQTPGKARDMISVTYFPVEDGKKIQPGMKILITP 371

Query: 353 PHYADIREKKFKAIIEKIDPII 374
                 R       I ++ P  
Sbjct: 372 DTVKRTRYGGIVGKITEVSPFS 393


>gi|325917946|ref|ZP_08180116.1| multidrug resistance efflux pump [Xanthomonas vesicatoria ATCC
           35937]
 gi|325535848|gb|EGD07674.1| multidrug resistance efflux pump [Xanthomonas vesicatoria ATCC
           35937]
          Length = 432

 Score =  113 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 53/394 (13%), Positives = 126/394 (31%), Gaps = 50/394 (12%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
            SG+I++    V+I+S   G+I    ++  + + +G  L       T             
Sbjct: 68  VSGQIISTHGRVDIRSGTPGLILSTTLKPNALVKKGQVLAELSADITD------------ 115

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                +  +S  D    +     +     + Q  DF G+     ++              
Sbjct: 116 -----EAGRSLSDETIRRALTRSEELTKEQLQAHDFSGQRERELTR-------------- 156

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               ++        ++  K S+L    + +Q+ L  ++ L  +  VS+      E  +  
Sbjct: 157 ----QVEETSGAMQEVARKISILEKKYAKNQELLKTIEPLLAEKYVSKYTYLTYENALLD 212

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  ++++   +Q  +      L  E   E        + ++E+ + T  D++++     K
Sbjct: 213 AETQIQDARAQQSTLRNQRAALLGEI-TEIKTTASRQASEIEREKSTIEDQVAR----AK 267

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           +   +TI SP++GT+    + S          +  I P   +      +  + I HV  G
Sbjct: 268 SDRLQTITSPLSGTVAAIYA-SQGQRIGTDSIIASITPSESVFEAEILIPSRAIGHVAVG 326

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ-------DNNLQTQEYYEVILKITD--L 396
               +    +   +    +  I  +    S              T+  Y   + +    +
Sbjct: 327 TEVLLNIAAFPKAKYGAIQGRIASLSTQTSPLGELERRYGRQSPTEPVYTAKVALPSQTI 386

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             +        G   +     +   + + +  P 
Sbjct: 387 GVAQEAKSFLPGMEVDAELILEGRKIWEWMFDPF 420


>gi|313676370|ref|YP_004054366.1| outer membrane efflux protein [Marivirga tractuosa DSM 4126]
 gi|312943068|gb|ADR22258.1| outer membrane efflux protein [Marivirga tractuosa DSM 4126]
          Length = 458

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 59/377 (15%), Positives = 132/377 (35%), Gaps = 37/377 (9%)

Query: 36  ILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
             LP   ++  +G++          E+ S   G I+++ V+ G  + +G  ++   +I+ 
Sbjct: 48  AFLPWTQNIRGNGQVTALSPSQRPQELNSVIDGRIEEWYVQEGDYVEKGDTIIFIREIK- 106

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCS 150
            +  D +   ++  +  ID ++ +L F   K D L+    + +E  QL     K +   +
Sbjct: 107 DEYFDPRL--LERTQAQIDAKRQSLGFYEEKIDALKSQVVAIDENRQLKLNQAKNYLRQA 164

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++     S  + + +  L         + +L ++   L++L     +     + L +K +
Sbjct: 165 ELQIQADSIDFEAAQTNLDIAEKQLQRQRELYDE--GLKSLTDLEARTSKFQEALAKKIS 222

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V ++ L      +  + +EL    +E  + L+       E      N   E+ +      
Sbjct: 223 V-ESKLLSSRNKLLNAKIELNSIYNEYTDKLQKARSSLFETQSMLQNAEAEVVK------ 275

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  ++LT  +       I +P  G I    S       +  + L+ I+P      +
Sbjct: 276 -----MENQLTNYQMRFGMYYITAPQNGYITRAVSTGIGENIKAGESLVSIMPADIDYAV 330

Query: 331 RAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              + P+ +     G T          + F  +  +    F   +  ID  IS       
Sbjct: 331 EMYIMPRDLPLFNVGNTVRLIFDGWPSIVFSGWPIVTYGTFGGEVVAIDRFISPNGK--- 387

Query: 383 TQEYYEVILKITDLAFS 399
               Y +++        
Sbjct: 388 ----YRILIAQDPEEPE 400


>gi|196037167|ref|ZP_03104482.1| hypothetical protein BCW_B0092 [Bacillus cereus W]
 gi|195990271|gb|EDX54324.1| conserved hypothetical protein [Bacillus cereus W]
          Length = 435

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 53/431 (12%), Positives = 147/431 (34%), Gaps = 28/431 (6%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEI-----LNEDNVVEIKSPF 63
           L+R  P  +    +  ++ +   + WS +  ++I    +  I     ++      +    
Sbjct: 17  LERKPPRFIAGFIIFLLMSLFTFLIWSYIGRVDIVSKGTAMIQGKSEISVSRTQIV---- 72

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G++    V++G ++ +G  LL  ++ E TD  +     I++L    +        + + 
Sbjct: 73  -GVVDTVAVKSGDEVKKGDILLQLKNQELTDKQNQTDQIIQHLEKQREMLVQLKTSIQSH 131

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS--LKMKLTRMRSIYLNRLDL 181
                   + + ++      + + +        I+ +  S  L  +   ++ + + + ++
Sbjct: 132 SPSFSNKVDKKIKEEYQAYEQGYKSLQTEKENEINIIDDSKLLNEQDEVLQGLIVEKDNV 191

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   +    +         + L +K    ++  N  E+ + +    L    +E+K + 
Sbjct: 192 QLEIESIERQKNKDNIPEEQKQLLTDKITSLKSQTNSIEKRIKQRKETLE---YERKKVD 248

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEM----SKLTILEKTREQKTILSPIA 297
                  +E       Y ++    + Q  ++   E+     +L  L    E  TI +   
Sbjct: 249 VAKEGKKEEKKNALNRYKEDAVISINQRIQSLEQELFINKQELDGLHHQSETTTIKAQKD 308

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G + +       +     Q ++ IVP      ++  +  ++I+ +KKG    +++  +  
Sbjct: 309 GIVHFPSIVQQGDLIDPGQDVVSIVPKELEKKVKILLPAQEIKEIKKGDK--IQYS-FKL 365

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
               K    +  +        +    +  YE+   I          EL  G         
Sbjct: 366 KNTDKQLGRVIYVSAH--PIFDKNAKEYMYEIEATIDTQELQ----ELHTGMIGRASVIT 419

Query: 418 KNTTLAQEIIH 428
               + + ++ 
Sbjct: 420 GEEPVWKFLLR 430


>gi|302035425|ref|YP_003795747.1| putative secretion protein HlyD [Candidatus Nitrospira defluvii]
 gi|300603489|emb|CBK39819.1| putative Secretion protein HlyD [Candidatus Nitrospira defluvii]
          Length = 367

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 66/413 (15%), Positives = 143/413 (34%), Gaps = 67/413 (16%)

Query: 11  RNHPASLKRMTLLSIIGIIGL--ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           R    +   +  + I+G + L  + W    P E  + ++G I  E + V + S FSG + 
Sbjct: 4   RTSTIAAAVLASVLIVGYVILDRLVWQDGFP-EGLIQANGRI--EGDHVTVASKFSGRLV 60

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
                 G+++ +G  L+  +D +T+  +D     + +L   ++   +AL  LN +  +  
Sbjct: 61  DLAAREGTEVHKGQVLIRLDDAQTSAKVDQAARLVDSLMAQVEAAHTALAVLNLEVPLNI 120

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A  ++   +   + K  +   +                                     
Sbjct: 121 EAVGAKVASMRAVIRKAQAVEYE------------------------------------- 143

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                  ++D   ++ L  + AVSQ  ++Q E     +  E+           + + +  
Sbjct: 144 ------ARRDTDRIRALLPEQAVSQQQVDQAEARWKVAVTEIAVANAALDQASKELAQAE 197

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                     ++    ++   +R      + L       +  TI++P  GT+   +    
Sbjct: 198 LGW-----QRIRSKEAEVAALERQRDQADATLAEARSVLDDLTIVAPTNGTVTT-RMVDV 251

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                   PL+++V      Y++  V   QI  V+    A +    + D     F+A + 
Sbjct: 252 GEVVAPGAPLLELV-DLDRLYLQVYVPELQIGKVRLDLPARIHTDAFPDR---SFEATVR 307

Query: 369 KIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            I           Q  + + +  Y V L +T+    + +  L  G PA+ +  
Sbjct: 308 YIASKAEFTPKEVQTPDERVKLIYAVRLYLTE----NPDHRLTPGLPADAMIR 356


>gi|298207876|ref|YP_003716055.1| hypothetical protein CA2559_06475 [Croceibacter atlanticus
           HTCC2559]
 gi|83850516|gb|EAP88384.1| hypothetical protein CA2559_06475 [Croceibacter atlanticus
           HTCC2559]
          Length = 467

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 61/415 (14%), Positives = 133/415 (32%), Gaps = 50/415 (12%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           T   I  II  + W           +   +  E     I+SP  G I+++ V  G  + +
Sbjct: 59  TFAIIGIIILFLPW---TQTVTGTGAVTTLTPEQRPQTIQSPIPGRIEEWFVREGDYVNK 115

Query: 81  GTPLLTFEDIETT----DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           G  +L   +I+      +L+   K         + + K  +  L+N+   L    + + E
Sbjct: 116 GDTILFISEIKNEYQDPNLVLRTKEQRDAKTNALSSYKEKVKALDNQVSALRSERQLKIE 175

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q  + L +            I++       +    R++ L    L++ + +    L   +
Sbjct: 176 QAENKLKQAQYKVKSDSIDLIAAKTNKDIAEKQYNRTVTLQEEGLKSTADVEDKRLKLQE 235

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +  ++          +N L   +  +  + +++     E  + +       D+     A
Sbjct: 236 TEAKLISQ--------ENKLLASKNDLINARIDITRTSAEYADKISKAQS--DKYTASSA 285

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            Y  E      +N  T  +   K+           IL+P  G I            ++ +
Sbjct: 286 QYDTEAQISKLENASTNYELRDKMRF---------ILAPQNGYINKAIRAGIGETFKEGE 336

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR--------FPHYADIREKKFKAIIE 368
            L+ I+P      +   V P  +  +  G    V+        F  + D     +   + 
Sbjct: 337 QLVGIMPSDYDLAVETYVAPIDLPLIHVGEQIRVQFDGWPAIVFSGWPDASFGTYGGKVV 396

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            ++  IS           + V++   +   +         +P  V   +   T+A
Sbjct: 397 AVETFISPNGK-------FRVLIAPDETKET---------WPKNVRVGSGARTIA 435


>gi|332297703|ref|YP_004439625.1| secretion protein HlyD family protein [Treponema brennaborense DSM
           12168]
 gi|332180806|gb|AEE16494.1| secretion protein HlyD family protein [Treponema brennaborense DSM
           12168]
          Length = 383

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 49/397 (12%), Positives = 127/397 (31%), Gaps = 69/397 (17%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               I+  V +SG I    N+ +IK+  +G I++     G  +  GT L+       +  
Sbjct: 46  CFGKIDDVVRASGIIRPAINISQIKNITAGEIEQIYYSPGQYVEAGTILVKLNQDTLSAQ 105

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                    + +  ++  +        + +++ +  +    +   +  + +   +K    
Sbjct: 106 KSAAAAHYTDTQSKLNGLEKLRQSYFAEKNLIPEGNKVAHTRFESYQAECNLLETK---K 162

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++ +  S ++KL    +  +   +LE +   +   L                 AV +N 
Sbjct: 163 NLAYLLYSEEIKLPASGTTPVKIRNLEYEHKQICDTL-----------------AVYKNQ 205

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
             +          E+   I   +     + +  ++  +                      
Sbjct: 206 FLE----------EITAEISNMELTETQLKQQLEQIEI---------------------- 233

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP-HSKLTYIRAKV 334
                     +     ++SP+AG I    S ++ ++    Q ++ I+P  +    I  ++
Sbjct: 234 ----------SLRNTILVSPMAGFIQEISSLNAGDFIFADQKILNIIPNSNSDFRIELRI 283

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             K    ++K     +RFP +     K  +  I+ IDP       +     ++ V+  + 
Sbjct: 284 PAKDAGKLRKNMKVKLRFPAFPYYEFKGAEGTIQTIDPDA---QASSSGTLFFTVLTDVD 340

Query: 395 DLAFSDNNIELRN---GFPAEVLFTAKNTTLAQEIIH 428
               +D    +     G   +     +   +   ++ 
Sbjct: 341 TYELTDRKGIIYPLRVGLEVDARIVMETKPIWYFLLK 377


>gi|291044547|ref|ZP_06570256.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|291011441|gb|EFE03437.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 379

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 63/406 (15%), Positives = 126/406 (31%), Gaps = 55/406 (13%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +  G+IL    V+ + +P +G I    VE+G ++  G  L             +++   
Sbjct: 15  TTVEGQILPASGVIRVYAPDTGTITAKFVEDGEKVKAGDKLFALSTSRFGAGGSVQQ--- 71

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                 + TE      L               EQ L  L   H   ++     +  +   
Sbjct: 72  -----QLKTEAVLKKTLA--------------EQELGRLKLIHENETRSLKATVERLENQ 112

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                         +L +  +    +  +   ++ L   + L   +AVS+ +    E  +
Sbjct: 113 --------------KLHILQQIDGQKRRIRLAEEMLRKYRFLSANDAVSKQETMNVEAEL 158

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +   +L     E+  +L+ I       NL  A+  K    +  Q +RT AD   ++   
Sbjct: 159 LEQKAKLDAYRREEAGLLQEIRTQ----NLTLASLPKRHETEQSQLERTIADISQEVLDF 214

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E  R ++ I +  +G I    +         S+ L+ IVP     Y    +       +K
Sbjct: 215 E-MRSEQIIRAGRSGYI-AIPNVEVGRQVDPSKLLLSIVPERTELYAHLYIPSSAAGFIK 272

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN-----------NLQTQEYYEVILK 392
                 +R+  Y   +       +  +      +                 +  Y V +K
Sbjct: 273 PKDKVVLRYQAYPYQKFGLASGSVVSVAKTALGRQELSGLGMVSSDLAKSNEPVYLVKIK 332

Query: 393 ITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
                 +       L+ G   E     +   L + ++ PI     +
Sbjct: 333 PDKPTITAYGEEKPLQIGMTLEADILHEKRRLYEWVLEPIYSMSGR 378


>gi|152973012|ref|YP_001338158.1| putative secretion ATPase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|330007641|ref|ZP_08305987.1| putative colicin V secretion protein CvaA [Klebsiella sp. MS 92-3]
 gi|150957861|gb|ABR79891.1| putative secretion ATPase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|328535426|gb|EGF61901.1| putative colicin V secretion protein CvaA [Klebsiella sp. MS 92-3]
          Length = 428

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 67/443 (15%), Positives = 150/443 (33%), Gaps = 57/443 (12%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           HH+  K L          + LLS   +  LI  ++       +   GE++   + V + +
Sbjct: 16  HHWKGKALLLAG-LPAWLVALLSFAFLAILIATTVFCSFTQRIDVQGEVITLPHSVNVYA 74

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           P  G +    V+ G  + +G PL   +    T   ++  V I+ +           + + 
Sbjct: 75  PQQGFVISQYVKVGDIVTKGQPLYEIDISRNTTTGNVSAVQIEVIN----------EKIA 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           N  D++ K   ++EE  +                              ++++I  +  + 
Sbjct: 125 NAEDIISKLNHNKEETTISLE--------------------------KQLKTINDSLKET 158

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
               +  +A L     +L+          ++++  N Q  + ++     +  + ++  + 
Sbjct: 159 NRMLANAQAGLKKMHDNLSSYDKYLSDGLITKDQYNYQHSLYFQQQSTYQSLVSQKMQLE 218

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             + +L  +   + A++  +IS      +    D  ++L           I +   G I 
Sbjct: 219 SQVTQLNSDKITKIADFDNQISSQ----ENQINDYKNQLVE-SNANGNIIIKATTEGRIE 273

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                +      +   L +I P      Y+   +    I +VK G    +R+  +   + 
Sbjct: 274 SLTV-TKGQMVDKGSSLAQIKPTGDIEYYLILWLPNNSIPYVKPGDEINIRYAAFPSDKF 332

Query: 361 KKFKAIIEKIDPIISQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRN 407
            +F   I  I  + + +             N Q    Y+ I+KI +  F      + L N
Sbjct: 333 GQFPGKILSISSVPTSRQEMSEYTNVTNGTNQQELALYKTIVKIENKTFEYNGKTLSLSN 392

Query: 408 GFPAEVLFTAKNTTLAQEIIHPI 430
           G  A+ +   +   L   +  P+
Sbjct: 393 GLKAQAVVFLEERPLYMWMFTPV 415


>gi|146301698|ref|YP_001196289.1| secretion protein HlyD family protein [Flavobacterium johnsoniae
           UW101]
 gi|146156116|gb|ABQ06970.1| secretion protein HlyD family protein [Flavobacterium johnsoniae
           UW101]
          Length = 451

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 58/400 (14%), Positives = 133/400 (33%), Gaps = 40/400 (10%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
            IIG +      + LP   ++S SG +     +     + +  +G I+K+ V+ G  + +
Sbjct: 35  VIIGFLIFSVACLFLPWTQNISGSGSVTTLKPDQRPQTVHNAIAGRIEKWYVQEGDYVKK 94

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G  ++   +++  D +D     + N +  +D +K A++   +K + L            D
Sbjct: 95  GDTIVFISEVK-EDYLDPNL--VNNTKQQVDAKKMAVESYGDKVNSL------------D 139

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
              +  +T  ++           L+    +++   L           ++  L   +    
Sbjct: 140 VQAQSLNTEREL----------KLQQAQNKIKQAQLKIKSDSMDLEAVKTQLRIAKTQFD 189

Query: 201 MMKNLFEKNAVSQND-------LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               L ++      D       L + E  +     +L  + +E  N    IN +  E + 
Sbjct: 190 RSTALNKEGLKPLTDVEQKRLKLQESEAYIITQQNKLLSSKNELINARVEINRITAEYSE 249

Query: 254 EFANYLKEISRDLE---QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           + +    +    L      +       ++ T          I +P +G +          
Sbjct: 250 KISKSRSDKFTALSTQYDTEAQVNKLENQYTNYRLRNGLYYITAPQSGYVNRALLAGLGE 309

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI-IEK 369
             ++  P++ I+P S    +   V P  +  V +G    V F  +  I    +  +    
Sbjct: 310 TIKEGTPIVSIMPSSYDIAVETYVDPIDLPLVHRGAKVRVWFDGWPRIVFSGWPGLSYGT 369

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNG 408
               I   +N +     Y V++    +       + +  G
Sbjct: 370 YGGKIVAIENFISANGKYRVLISPDGVDNKWPKELSIGAG 409


>gi|270262693|ref|ZP_06190964.1| microcin H47 secretion protein MchE [Serratia odorifera 4Rx13]
 gi|270043377|gb|EFA16470.1| microcin H47 secretion protein MchE [Serratia odorifera 4Rx13]
          Length = 413

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 70/450 (15%), Positives = 145/450 (32%), Gaps = 63/450 (14%)

Query: 6   WKNLKRNHPA-SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           W+      P      M  L    I+  +++ I       V+ +GEI        + S   
Sbjct: 3   WRGRAILLPGIPFWAMAGLCFFFIVAFLSFIIAGTYTRRVNVTGEISTYPRAANVYSGVQ 62

Query: 65  GIIKKFQVENGSQILQGTPLLTFE---DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           G++ K  V  G +I  G P+   +      +  + D K+  I N    I    S L    
Sbjct: 63  GVVVKQFVTEGQEIKSGDPIYQIDVSKSTRSGVVSDNKRQDIDNQLERITQIISRL---- 118

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                     ES ++  LD L K  +  +  F      + R+                  
Sbjct: 119 ----------ESNKKATLDMLEKQRAQYTAAFQRSTDILRRA------------------ 150

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                  +  +   ++++   +    +  ++++ L+ Q  + Y+    L     + +   
Sbjct: 151 -------QEGIHIMKENMENYRRYQTRGLINKDQLSDQVALYYQQQNNLLGLSSQNEQNA 203

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I  L  + + + A +  +I    +   + +  +   L I         +L+   G + 
Sbjct: 204 LQITALESQIHTQAAEFDNQI---YQMELQRYDLQKEMLNIDADGTIIVRVLA--DGRVD 258

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                +          L++I+PH      +   V    I ++  G    VR+  +   + 
Sbjct: 259 SLSV-TVGQMVNVGDSLLQIIPHKIDHYALVLWVPNDAIPYIATGDKVNVRYDAFPAEKF 317

Query: 361 KKFKAIIEKID--PIISQQDNNLQTQ---------EYYEVILKITDLAF--SDNNIELRN 407
            +F   +  I   P   Q+    Q            YY+VI++        +   + L N
Sbjct: 318 GQFAGTVSVISKAPASPQEMLTYQGAPKAALTTAVPYYKVIVRPEKQVIVYNRKRLSLEN 377

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           G  A+     +  ++ Q ++ P  D     
Sbjct: 378 GMKAQSTLFLEKRSIYQWMLSPFYDMKHSA 407


>gi|328946565|gb|EGG40704.1| hypothetical protein HMPREF9397_0361 [Streptococcus sanguinis
           SK1087]
          Length = 172

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 57/172 (33%), Gaps = 7/172 (4%)

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L +N+R      ++L   +   E  TI +P    I                P+ ++VP
Sbjct: 2   AALTENKRKT---EAELIQQQYILEYLTIKAPSTDQIASLIVSHIGQTVSAENPVARLVP 58

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                   A+V+ K I  ++KG  A V+   Y         A +  I P   Q       
Sbjct: 59  SDSELIFEAQVSDKDITDIQKGMKAVVKLQAYPYSDYGTIPAKVTYISPTAFQVKGKGMV 118

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
              Y V + I         I+L +G    +     N ++    + PI D   
Sbjct: 119 ---YIVQVAIDKKHLH-KGIDLVSGLSGILEIKTDNRSILDYFLDPIRDGLN 166


>gi|72383063|ref|YP_292418.1| transporter component [Prochlorococcus marinus str. NATL2A]
 gi|72002913|gb|AAZ58715.1| possible transporter component [Prochlorococcus marinus str.
           NATL2A]
          Length = 377

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 55/319 (17%), Positives = 122/319 (38%), Gaps = 19/319 (5%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLN 177
           + N  D +E+ F+S   +++    KY +      +      S+      K   +  +  N
Sbjct: 64  IQNIQDNIERLFKSDTNKIVLKQSKYWARAITWVLLGGTAFSIGWLAFAKTEEIAIVMGN 123

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LRENIHE 236
              +     +   L    ++ LT   +  +K  V    L + +  + K+ L+ L EN+  
Sbjct: 124 LEPIGGVVDVQMPLQGIAREILTEEGSRVKKGDV----LIRLDTEITKARLDYLLENLKS 179

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +  +L  + +L DE  +    YL        + + +  + MS++   +   + + I +PI
Sbjct: 180 KNLILNKLKQLLDEGAVSELQYL--------EQKISVEELMSEIKANQVQFKYQEIKAPI 231

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +GT+   +  S    AQ S+P++KIVP +     + ++  + I ++K G  A +    + 
Sbjct: 232 SGTVFDLKPKSPGFVAQTSEPVLKIVPANN-LIAKVEIDSRSIGYIKIGKAADISIDTFP 290

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEV 413
                  K  +  I       D +      +   +K+ +          + ++ G     
Sbjct: 291 STDFGVIKGTVTSIGSDALPPDPSQGKGYRFPAKIKLDEQFLKVKTGKKLAIQAGMGLTA 350

Query: 414 LFTAKNTTLAQEIIHPITD 432
               +  T  Q ++   +D
Sbjct: 351 NIKLRKLTYLQLLLSNFSD 369



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 12/157 (7%)

Query: 15  ASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
               R     ++G     I W      E      G +     VV+++ P  GI ++   E
Sbjct: 88  KYWARAITWVLLGGTAFSIGWLAFAKTEEIAIVMGNLEPIGGVVDVQMPLQGIAREILTE 147

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            GS++ +G  L+  +   T   +D    ++K+    ++  K  LD               
Sbjct: 148 EGSRVKKGDVLIRLDTEITKARLDYLLENLKSKNLILNKLKQLLDE-----------GAV 196

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            E Q L+         S++    +   Y+ +K  ++ 
Sbjct: 197 SELQYLEQKISVEELMSEIKANQVQFKYQEIKAPISG 233


>gi|118479614|ref|YP_896765.1| hypothetical protein BALH_4041 [Bacillus thuringiensis str. Al
           Hakam]
 gi|196044838|ref|ZP_03112072.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|118418839|gb|ABK87258.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|196024326|gb|EDX62999.1| conserved hypothetical protein [Bacillus cereus 03BB108]
          Length = 455

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 70/450 (15%), Positives = 168/450 (37%), Gaps = 48/450 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L++N P  +K    L +  II  + WS    I+IS   S  I +    + +K   SG I 
Sbjct: 18  LEKNPPKFIKLFIYLVLTIIISALIWSYFSKIDISAKGSATIQSSTATIAVKPKVSGEIN 77

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             +++ G ++ +G PL+   + +    ++ +K  ++  R  +D    +L  L +  D  +
Sbjct: 78  DIKIKQGEKVRRGDPLIVINNKQ----LEQEKKHLEENRDKLDAGIKSLKILKDVIDKNQ 133

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSL 187
                  E+ +      +     + N    +       +L  + ++    + +LE +   
Sbjct: 134 SKLSIDVEESIRNELDSYLKQKTLLNNENKNKIVDFTHRLQVLNNVKDEGINNLEFEIES 193

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI-----VYKSTLELRENIHEQKNMLR 242
           ++   +  + +      L ++N + +N+   QE       V +   +++ N         
Sbjct: 194 IKNQNNILKIEKEG---LLKQNKIIKNENIAQETEANVNKVNQLDSQIQGNQKSILIKQE 250

Query: 243 HINELYDEANLE----------------------FANYLKEISRDLEQNQRTFADEMSKL 280
            I     E  LE                       A+ + +I++++++ Q+  +     +
Sbjct: 251 QIKNRAQEIELEKKVINENIRAQESSIQDSIESLKASTVSDIAKEIDEKQQQLSLLQQDI 310

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
             +    EQ  I +P  G I         +  +Q + ++ I P  K   +   ++ ++I 
Sbjct: 311 NNINLNYEQTVITAPKDGVIEMPNRIKVGDTIEQDKEVLSISPDEKTNRVLLYISAEEIN 370

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAF 398
            +K G    +++  +     + +   + +I  DP+ S+     +   ++ V   I +   
Sbjct: 371 KIKIGDK--IKYT-FEVGTTETYYGSVVQIYHDPVTSKN----RGTTFFVVEGTIENTG- 422

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
              N +LR+G   +         +   ++ 
Sbjct: 423 ---NKKLRSGSTGKAAIVVDQKNILSLMLE 449


>gi|307152114|ref|YP_003887498.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7822]
 gi|306982342|gb|ADN14223.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7822]
          Length = 504

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 68/437 (15%), Positives = 152/437 (34%), Gaps = 52/437 (11%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            LK      L  +  LS+ G+ GL  W        +  ++     + ++  I +  S  +
Sbjct: 92  PLKSLVKRGLMLLITLSLFGVGGLWGWRWW-QFGQTHVTTDNAQIQGHLSPISAKISATV 150

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           ++  +E+G  +  G  L+  ED +    I   + +++  + H+ T +  +          
Sbjct: 151 QQVLIEDGDPVEAGQILIILEDQDLNLKIQQAQANLRAAQAHLKTARDTV---------- 200

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                           + + T  +     ++S   ++  +   +  +       +   + 
Sbjct: 201 ------------SVTRQTNPTQVQQAQSKLASSQSAVSAEQANVHQMQAKVETEQANVAQ 248

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVS--------------QNDLNQQERIVYKSTLELREN 233
            + L++    D    + L+E+ AVS              ++ L    + V ++  E++  
Sbjct: 249 AQTLVNKTLADFRRYEFLYEQGAVSAQQFDTARAAYEDARSHLAATNKTVAQAQAEVKNA 308

Query: 234 IHEQKNMLRHINELYDE-ANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKT 291
             + K     +     + A  + +     +  D  ++ Q       + L +  +  +   
Sbjct: 309 QAQLKQAQAQVEAARGQVAETQVSGQTVTVQTDQQQEAQAQVEQAKAALALARQQLKYTL 368

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP-HSKLTYIRAKVTPKQIQHVKKGYTATV 350
           I SPI GTI    +       Q  QPL+ +VP  ++  Y++A     Q+  +  G  A +
Sbjct: 369 IKSPIKGTIGQLTA-QMGQKVQPEQPLLSVVPLQTERVYVQANFKETQLGKLHIGQPADI 427

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNN 402
               Y   +   F A I  I P           +  T  + +V+    +++     +D  
Sbjct: 428 EVDAYPQEK---FHATIAGISPATGASFALIPPDNATGNFNKVVQWVPVRLVFNRNADPQ 484

Query: 403 IELRNGFPAEVLFTAKN 419
            +LR G   +V      
Sbjct: 485 HKLRPGLNVKVTVNTAK 501


>gi|317047728|ref|YP_004115376.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
 gi|316949345|gb|ADU68820.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
          Length = 428

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 62/403 (15%), Positives = 131/403 (32%), Gaps = 61/403 (15%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S SGE++   + + + +P  G+I +  V  G Q+  GTPL   +    +   +L   + 
Sbjct: 54  TSVSGEVITWPHTINLFAPEQGVISRLLVSPGQQVSAGTPLYALDISRVSASGNLSATTR 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             L+                          +++Q+ + L +                  S
Sbjct: 114 ALLK-------------------------KQQQQMGEMLHQLEQNRRATL--------AS 140

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           ++ +L ++RS    R   +         L   +  +        +  ++ +  N Q  + 
Sbjct: 141 IQQQLDQLRSA---REKTQQMVDSATQGLDVMRSSMNDYNRFARRGLITSDQQNNQRYLF 197

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           Y+          ++      I EL  +     A++       L Q     AD   +L   
Sbjct: 198 YQQLSVWHSLNSQRVQQDMQIAELLSQQVTRAADFDS----QLAQYNIRQADIERQLAEA 253

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL---TYIRAKVTPKQIQ 340
           +   E+  I +P AG I      ++         L ++VP         I   +    I 
Sbjct: 254 DAGSERL-IAAPSAGRISSLSV-TAGEMVSDGDSLAQLVPAGDDIPSLVI--WLPNDSIP 309

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQDNNLQTQE----------YYE 388
           +VK G    V +  Y   +  +F   +  I   P+  ++ NN  +            +++
Sbjct: 310 YVKPGDVINVSYAAYPAEKYGQFPGKVLSISSAPVPLRELNNYGSAPRSPAGQITGAWFK 369

Query: 389 VILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
             + +          ++ L +G   +     +   L Q ++ P
Sbjct: 370 ANVALNHQGLRWQGKDLPLASGMQLQATVFLEKRPLWQWMLSP 412


>gi|208972029|gb|ACI32628.1| McbA [Moraxella catarrhalis]
          Length = 420

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 61/431 (14%), Positives = 136/431 (31%), Gaps = 55/431 (12%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
            P S   +T  + +  + LI + +        +  G+++ +  +V++ +  +G+I +  V
Sbjct: 25  TPISFAFLTFCAFMAGLVLIIFLVWGEYTKRSTVKGQLIPDKGLVQVYTTTAGVIIEKYV 84

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  +  G  L        TD  +++ +  K L                          
Sbjct: 85  SEGQAVKAGDMLYKISTTRHTDAGNVQGIIDKEL-------------------------- 118

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           + + QL++                I++    L++ + +          L+ +  L    +
Sbjct: 119 AFKRQLIEHEITRTKQAQAAEKRNIANTIERLQVDMDK----------LQAQIELQTHQV 168

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +  ++ L   +   +  AVS+ +L  Q          L       +     I +   E  
Sbjct: 169 AIAKETLARYEFAMQSEAVSKQELESQTMAYNTQLNSL----TALEREKEMIAKQIKEQT 224

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           +  +    E    L Q +RT +D  S  +I  +  +   I + + G +          + 
Sbjct: 225 IALSRLEHEHRTTLLQYERTLSDNKSD-SIQNQANDTLIIKAQVDG-VASVAHADVGQFV 282

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             SQ L+ I+P+         V  + I  VK      +R+  Y   +    K  I  +  
Sbjct: 283 DSSQSLVSILPNDSYLIAVMYVPSRAIGFVKTDDEVLLRYVAYPYQKFGHAKGRIISVAK 342

Query: 373 I-----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKN 419
                              +  +  Y +   +     +     + L  G   E     + 
Sbjct: 343 TAHAGQNLPTIGTVSATEQIANEPMYVIKAYLDKQTITAYGKELPLAVGMTLEGDVMHET 402

Query: 420 TTLAQEIIHPI 430
             L + ++ P+
Sbjct: 403 RKLYEWVLEPL 413


>gi|196259846|ref|YP_002122355.1| hypothetical protein pLQ510_p1 [Moraxella catarrhalis]
 gi|189092747|gb|AAF61809.2| unknown [Moraxella catarrhalis]
 gi|209973248|gb|ACJ03861.1| McbA [Moraxella catarrhalis]
          Length = 420

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 60/431 (13%), Positives = 135/431 (31%), Gaps = 55/431 (12%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
            P S   +T  + +  + L+ + +        +  G+++ +  +V++ +  +G+I +  V
Sbjct: 25  TPISFAFLTFCAFMAGLVLMIFLVWGEYTKRSTVKGQLIPDKGLVQVYTTTAGVIIEKYV 84

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  +  G  L        TD  +++ +  K L                K  ++E    
Sbjct: 85  SEGQAVKAGDMLYKISTTRHTDAGNVQSIIDKEL--------------TFKRQLIEHEIT 130

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             ++          +T                      +  + ++   L+ +  L    +
Sbjct: 131 RTKQAQAAEKRNIANT----------------------IERLQVDMDKLQAQIELQTHQV 168

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +  ++ LT  +   +  AVS+ +L  Q          L       +     I +   E  
Sbjct: 169 AIAKETLTRYEFAMQSEAVSKQELESQTMAYNTQLNSL----TALEREKEMIAKQIKEQT 224

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           +  +    E    L Q +RT +D  S  +I  +  +   I + + G +          + 
Sbjct: 225 IALSRLEHEHRTTLLQYERTLSDNKSD-SIQNQANDTLIIKAQVDG-VASVAHADVGQFV 282

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             SQ L+ I+P+         V  + I  VK      +R+  Y   +    K  I  +  
Sbjct: 283 DSSQSLVSILPNDSYLIAVMYVPSRAIGFVKTDDEVLLRYVAYPYQKFGHAKGRIISVAK 342

Query: 373 I-----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKN 419
                              +  +  Y +   +     +     + L  G   E     + 
Sbjct: 343 TAHAGQNLPTIGTVSATEQIANEPMYVIKAYLDKQTITAYGKELPLAVGMTLEGDVMHET 402

Query: 420 TTLAQEIIHPI 430
             L + ++ P+
Sbjct: 403 RKLYEWVLEPL 413


>gi|46202994|ref|ZP_00052259.2| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 462

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/359 (12%), Positives = 122/359 (33%), Gaps = 42/359 (11%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P +++ +  L ++ ++ +  ++ L      V + G +  +  ++ + SP +G +    V+
Sbjct: 27  PLAIRLVVGLCLVFVVLVGLFAWLGSYTRRVHAEGMLAPDIGLITVASPLAGRVSASGVK 86

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +G  L T +                            LD ++        A   
Sbjct: 87  EGDRVERGQLLFTID----------------------------LDAVS--------ASGP 110

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            +E+++  L     +  +      +           ++ ++   R  +E +  L   L+ 
Sbjct: 111 TQERVIAQLALQRESVERQRAARAAMAEAEKAGLKDQIANLEAQRARIEEQVLLQDKLVP 170

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +     + +L  +      D   Q        L+    + + +     I     E   
Sbjct: 171 PLKARADELADLVTRGFARAADFQSQ----NYLYLQASSQLAQFRQGALQIEGKLGELRA 226

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + A + + ++RDL +  R+ A ++ +     + R    + +P  G +   ++ +      
Sbjct: 227 KLATFDETLARDLAELDRSAA-QLEQQRAESEARRAIEVRAPERGILTSIRAQA-GQTVA 284

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               L+ ++P          V    I  V+ G +  +R+  +   R    + +  ++  
Sbjct: 285 AGANLLTLLPSDGRMQANLFVDSSAIGFVEPGASVMLRYAAFPFQRFGLHRGVATEVTR 343


>gi|149372062|ref|ZP_01891332.1| hypothetical protein SCB49_00040 [unidentified eubacterium SCB49]
 gi|149354829|gb|EDM43391.1| hypothetical protein SCB49_00040 [unidentified eubacterium SCB49]
          Length = 448

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 59/391 (15%), Positives = 130/391 (33%), Gaps = 42/391 (10%)

Query: 2   HHFMWKNLKRNHPASLKRMTLL--SIIGIIGLITWSILLPIEISVSSSG---EILNEDNV 56
           +  + K  K  H     R  L    I+ II  + W        +V+ +G    +  +   
Sbjct: 18  YSALAKTQKVKHNKYFNRFLLASAIIVLIILFLPW------TQNVTGAGYVTTLTPDQRP 71

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT----DLIDLKKVSIKNLRCHIDT 112
             I+SP  G I+++ V  G  + +G  +L   +I+       L++            + +
Sbjct: 72  QTIQSPIPGRIEQWFVREGDYVAKGDTILFVSEIKNEYQDPRLVERTIAQRDAKNNAVTS 131

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            K  +  L N+ + L+   + + EQ  + L +            +++       +    R
Sbjct: 132 YKDKVRALENQINALQSERKLKIEQAENKLKQTQYKVKSDSIDLVAAKTNKEIAQKQYDR 191

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           ++ L    L++K+ +    L   + +  ++          +N L   +  +  + L++  
Sbjct: 192 TVTLQTEGLKSKADVESKQLKLQETEAKLIGQ--------ENKLLGSKNELINARLDINR 243

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                   +       D+     A +  E      +N  T  +   K+           I
Sbjct: 244 TATAYAEKISKAQS--DKFTASSAQFDTEAQVSKLENASTNYELRGKMRY---------I 292

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR- 351
           L+P  G I            ++ + L+ I+P      +   V P  +  +  G    V+ 
Sbjct: 293 LAPQNGYINKAIKTGIGETFKEGEQLVGIMPADYDIAVETFVAPIDLPLIHVGEDIRVQF 352

Query: 352 -------FPHYADIREKKFKAIIEKIDPIIS 375
                  F  + D     +   +  ++  IS
Sbjct: 353 DGWPAIVFSGWPDSSFGTYSGTVIAVETFIS 383


>gi|227537843|ref|ZP_03967892.1| HlyD-family transporter [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242457|gb|EEI92472.1| HlyD-family transporter [Sphingobacterium spiritivorum ATCC 33300]
          Length = 427

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 68/435 (15%), Positives = 164/435 (37%), Gaps = 21/435 (4%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
              M   + R     LKR      + ++ L   +  +     ++++ +I  ++    + +
Sbjct: 13  SEDMQDIIARPPSWLLKRGISFIFLTLLMLFGMTAFIRYPQMITATMKITTDNAPKSVVN 72

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             +G I +  V++G  + Q   L   E     D I      +K ++   D +   L  + 
Sbjct: 73  KIAGSIVQLLVKDGEWVNQFETLAYMESTGNHDQILNLLEKLKRVQKSEDNQNLELKNIT 132

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           +  D+     +S  +        Y +       +   S+ R        M +I      +
Sbjct: 133 SPVDLELGEVQSAYQNFYQAYLNYLAARDDGIYFRKRSILR------KEMDNIGEQNKRI 186

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           ++  +L +  ++  +K+    K L EK  +S  +L +QE ++       ++ I   +N L
Sbjct: 187 QDSYALQKREINLAEKEYEKYKILAEKKVISPMELQKQEALLISK----KQGIPLAENNL 242

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
            +          E ++   +IS + ++  ++    +S++   E  ++Q  +++P +G ++
Sbjct: 243 LNNQSASLARIKELSDLDSKISDEKKKIYQSLNSLISEI---ENWKKQYVLVAPSSGYVI 299

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
           Y  +   + +   S  +  I   ++  Y   ++   +   +K G    ++   +      
Sbjct: 300 YGSAIQENQFLPISSDVFYINSKNERYYGEMQLPQLEFGKIKIGQEVMIKVRGFQYQEYG 359

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             K  I  I  I  +          +  ++ I +    D+ I LR    A+V    +  +
Sbjct: 360 YLKGRIRSISDIPIKD-------SLFLSMVSI-ERKPQDSLIRLRPRLLADVEIITEEES 411

Query: 422 LAQEIIHPITDNWPK 436
           + + I   +T N+ K
Sbjct: 412 ILKRIWRNLTKNFYK 426


>gi|229153743|ref|ZP_04281885.1| hypothetical protein bcere0011_52430 [Bacillus cereus m1550]
 gi|228629732|gb|EEK86418.1| hypothetical protein bcere0011_52430 [Bacillus cereus m1550]
          Length = 435

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 71/429 (16%), Positives = 157/429 (36%), Gaps = 25/429 (5%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLIT--WSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           L R  P+ +K    L  +G        W+ L  I+I    +  +    +V  I++  SGI
Sbjct: 17  LDRKPPSFVK--WFLGFLGFCLFFGSLWAYLGKIDIVSKGTAIVQGGQDVSIIRTSLSGI 74

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++ +V++G +I +G  ++  ++ E  D    KK  +  +  HI+ +K+ L  L +  + 
Sbjct: 75  VEELRVKSGDEIKKGDIIIQLKNEELMD----KKKQLNLMINHIEIQKNMLLQLKSSIEK 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM-KLTRMRSIYLNRLDLENKS 185
              +F    +       K +    K+      S  + L+  K++      L  L LE + 
Sbjct: 131 EANSFSENVDSKFLEEYKSYENGYKLLRKEKESEIKMLEQNKVSDETDEVLQGLFLEQEK 190

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +     +     D   + +  ++    + +L + ++      +E R++I + +N    I 
Sbjct: 191 TEQEIKMLEQNNDQNFLGS-SKEEFDQRINLLKSQKNNIGKRIEQRKSILDSENKKLLIQ 249

Query: 246 ELYDEANLEFA--NYLKE----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           +   E   + A   Y ++    I++ LE+ +     +  +   L       +I S   G 
Sbjct: 250 KKNKEEQNKIALDKYKQDNIVVINQRLEKMEEDLFLKKQEKDSLLSNEGNMSIRSSKDGI 309

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +  +      +  +  Q +  I+P      I+  +     + +K G         +    
Sbjct: 310 VQLSSLLQKGDLLEAGQEITSIIPKESNKKIKILLLADSRKGIKIGDKVN---YSFNIDS 366

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           E K   +++ I        N       YEV   +      D N+ +              
Sbjct: 367 ENKLVGVVKYISA--QPTFNKDMKSYVYEVDATVNTDKLDDLNVGIV----GSASIVIGE 420

Query: 420 TTLAQEIIH 428
            ++ + I+ 
Sbjct: 421 ESIWKFILK 429


>gi|298373931|ref|ZP_06983889.1| hemolysin secretion transport system membrane protein [Bacteroides
           sp. 3_1_19]
 gi|298268299|gb|EFI09954.1| hemolysin secretion transport system membrane protein [Bacteroides
           sp. 3_1_19]
          Length = 430

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 58/382 (15%), Positives = 134/382 (35%), Gaps = 32/382 (8%)

Query: 60  KSPFS-------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + P +       G I++  V +   + QG  L   E+   TD       ++         
Sbjct: 62  QHPATAVVTRAAGKIQELLVRDNRPVRQGDWLAVIENHADTDDAIYLDKAL--------- 112

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E+S  D +++    L K  E     +        S      NY     Y      + +  
Sbjct: 113 ERSGSD-VDSLDKALSKYKELSLGDMQAAYSGLLSALHACINYREIDYYPQKMTSIRKQI 171

Query: 173 SIYLNR-LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           ++Y     + E +   L    +  ++       L+ ++ +S  +       + +S   L 
Sbjct: 172 ALYKAYYNETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLE 231

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 +N+   I E  +++ L+      E    L Q  +T  +++  L  + + R +  
Sbjct: 232 GAAASAENLRIQIGEQ-EQSLLDLTLERSEKEFTLRQELQTAREQL--LNSMNEWRLRYC 288

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATV 350
           +++P+ G + + + ++ + Y    +    +VP  +     + ++   +   V++G  A V
Sbjct: 289 LIAPVGGVVTFTKYWNENQYIPSGEVAFTVVPQGEGRLVGKVRIPIARSGKVRRGQRAIV 348

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL--RNG 408
           RF ++ D        ++  I  + + +        YY   +   +   ++  I+L     
Sbjct: 349 RFSNFPDQEFGVVNGVVSNISLVPTDE--------YYTADIDFPEGLRTNYGIDLPVSPE 400

Query: 409 FPAEVLFTAKNTTLAQEIIHPI 430
             A      +   L +    PI
Sbjct: 401 TQASAEIVTEELRLIERFFLPI 422


>gi|289166230|ref|YP_003456368.1| HlyD family secretion protein [Legionella longbeachae NSW150]
 gi|288859403|emb|CBJ13340.1| putative HlyD family secretion protein [Legionella longbeachae
           NSW150]
          Length = 336

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 95/237 (40%), Gaps = 10/237 (4%)

Query: 210 AVSQNDLNQQERIVYKSTLELR--ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            +S ++  + + ++   + ++   +   + +    H  E   + N    + LK+   +L 
Sbjct: 101 VISNSEQEKTKALMNNLSQKITNLKREAQLRKEHYHALEQLKKKNYISTSTLKDTELELL 160

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +     E  +L   ++++ +  + SP+ G I     +      + S+ L+ I+P +  
Sbjct: 161 EIRNKIQSENLELIKYKQSQSEL-VRSPVDGVITNI-FYKQGQVVEASKILLHIIPDNST 218

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ----T 383
              R  +  K I  +KKG    +++  Y   R   +KA I +I+  +   +   +     
Sbjct: 219 LVARLYIPSKDIGFLKKGAQVIIKYDAYPSQRFGFYKAFIREINLTVLTDEKEDKPIHVG 278

Query: 384 QEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           + YY++  ++     +       L +G     + T +   + Q I  PI   +  +F
Sbjct: 279 EPYYKIKAELETPYVNLYGKKENLSHGMTLTAVITGEKKKIWQWIFDPIYSYYGDVF 335



 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 6/157 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++ N P + +   +LS + ++ +  +             G + ++  +V + +   G+I 
Sbjct: 24  IRINVPFNYQLAGILSAVLLVIITLFFCFAQTSEQTYIRGYLDSDGGIVTVNAEAGGLIN 83

Query: 69  KFQVENGSQILQGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKS---ALDFLNN 122
           +  VE G  + +G  L    + E   T  L++     I NL+      K    AL+ L  
Sbjct: 84  QAGVEEGQSVKKGDVLFVISNSEQEKTKALMNNLSQKITNLKREAQLRKEHYHALEQLKK 143

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +     +  E +LL+   K  S   ++  Y  S 
Sbjct: 144 KNYISTSTLKDTELELLEIRNKIQSENLELIKYKQSQ 180


>gi|318042907|ref|ZP_07974863.1| transporter component [Synechococcus sp. CB0101]
          Length = 380

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 60/415 (14%), Positives = 143/415 (34%), Gaps = 81/415 (19%)

Query: 17  LKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             R +   ++G  G  + W  L   E  VS+ G++    +V E++ P +G++K+  V+ G
Sbjct: 30  WMRASAWGLVGTTGFALAWLALAQTEEIVSAPGKLEPIGSVSEVQIPLNGVVKQVLVKEG 89

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           +++ +G  LL  +   +++     + SI   +  +  ++  L+                 
Sbjct: 90  NKVEKGQVLLQLDTEASSERQANLEKSIALKQQELALKQQELER---------------- 133

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                            +    S+  + L+  L   + I  + ++LE + +  R  L   
Sbjct: 134 -----------------YLELNSTEQQMLRKNLALQQEIERSYVELEREGASARLQLLQQ 176

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q  +  ++   E+   +Q D  +Q  I+ ++  +LR  + + ++ L   N      NL +
Sbjct: 177 QNQVAEVQGKLEQ---TQVDRRRQVLILEQTVQQLRGQVAQMRSDLAEQN-----LNLRY 228

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                 +S  + + +      +S+                                   +
Sbjct: 229 QTLRSPVSGLVFELKAKAPGYVSR----------------------------------TA 254

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            P++K+VP       R +V    I  V  G  A +    +        +  + ++     
Sbjct: 255 DPVLKVVPFD-KLEARVEVPSGDIGFVHTGQQADLSIDSFPATDFGVLEGKVRQVGSDAL 313

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQEII 427
             D   Q   +  V +++           ++ L+ G   +     +  +  Q ++
Sbjct: 314 PPDQLKQEYRF-PVWIRLASQQLKLKSGRSLPLQVGMSLQASIKLRKVSYLQLLL 367


>gi|332162095|ref|YP_004298672.1| hypothetical protein YE105_C2473 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666325|gb|ADZ42969.1| hypothetical protein YE105_C2473 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 427

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 70/426 (16%), Positives = 140/426 (32%), Gaps = 51/426 (11%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S     +L+++ I  LI + +L         +G +++   V  I +P  GII     E
Sbjct: 29  PVSASVWAMLALVLIASLIAFLVLGTYTQKARLAGSVVHHPAVARIIAPRDGIIVSSLAE 88

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  +        T+    +  +   L+    T +  +   +   D+       
Sbjct: 89  EGKTVRAGEVIYVVNMETQTEFGGTRHETAAALKLQKATIEREIKLKSEAADI------- 141

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                                             L  + +  + +  +++         S
Sbjct: 142 -----------------------------EQNFLLLSLENKEIEQQKMDDLIGKSTQQTS 172

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              + +   K L  +    + +   +    Y + ++L     E+  +   I         
Sbjct: 173 WLLEKVQHFKELVRQGIALETEHMSRRSEYYSAAVQLENYKREKVRLQGEIVN----IKA 228

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + A    EI   LE   R  A     L  +E+ RE   I SPI GT+      +  N  +
Sbjct: 229 QLAAIHSEIEVSLEILHRQTARLDQDLISIEEQRE-LQITSPIDGTLTGITGLA-GNTIR 286

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP- 372
            +Q L  +VP S    +    T   I  +++G    +RF  Y      ++  I+  I   
Sbjct: 287 AAQELASVVPTSGQVEVEIFATADTIGELREGQAVRLRFDAYPYQWFGQYDGIVRSISTT 346

Query: 373 ------IISQQDNNLQTQEYYEVILKITDLA--FSDNNIELRNGFPAEVLFTAKNTTLAQ 424
                  IS++  +   + Y++V +   + A   +     LR G   +     +   L +
Sbjct: 347 SVEQRLDISEKQAHQPQRHYFQVRIIPKNNAVVMAGETYPLRPGIGVQTDVFIRKRPLYE 406

Query: 425 EIIHPI 430
            ++ P+
Sbjct: 407 WLLLPL 412


>gi|238892624|ref|YP_002917358.1| putative secretion ATPase [Klebsiella pneumoniae NTUH-K2044]
 gi|238544940|dbj|BAH61291.1| putative secretion ATPase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 406

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 67/429 (15%), Positives = 150/429 (34%), Gaps = 56/429 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               + LLS + +I LI   I       +   GE++   + + + SP  G I K  V+ G
Sbjct: 7   PAWLIVLLSTLFLIALIVAVIFCKFTQRIDVKGEVITLPHSINVFSPQQGFIIKQYVKIG 66

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +  PL   +    T   ++    ++++           + + N  ++++K   +++
Sbjct: 67  DLVKKNQPLYEIDVSRNTSSGNVSAAQVESIN----------EKIYNSEEIIKKLVHNKK 116

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L               N  + +   SLK+ +  +++               +A L   
Sbjct: 117 QTL------------NALNEQLKTSTDSLKVTIRMLQNT--------------QAGLKKM 150

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +L           ++++  N Q  + ++     +  + ++  +   I +L  +   + 
Sbjct: 151 HDNLASYDKYLSDGLITKDQYNYQHSLYFQQQSAYQSLVSQKMQLESQITQLNSDKVTKA 210

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++  +IS    Q      D  ++L I         + +   G I    + +        
Sbjct: 211 ADFDNQISSQYNQT----NDYKNQL-IESNANGNLIVKATADGRIESLSA-TQGQTVDNG 264

Query: 316 QPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
             L +I P      Y+   +    I ++K G +  +R+  +   +  +F   I  I  + 
Sbjct: 265 SSLAQIKPIGNVEYYLILWLPNNSIPYLKIGDSINIRYDAFPADKFGQFPGEIISISSMP 324

Query: 375 SQQDN-----------NLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTT 421
           + +               Q    Y+ I+KI D  F      + L NG  A+ +   +   
Sbjct: 325 ASRQEMSEYTNVNNGSTQQELALYKAIVKIKDKEFSYKGKTLSLSNGLKAQAVVFLEERP 384

Query: 422 LAQEIIHPI 430
           L   +  PI
Sbjct: 385 LYMWMFTPI 393


>gi|193805067|gb|AAP03991.2| putative microcin L transport protein [Escherichia coli]
          Length = 413

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 64/436 (14%), Positives = 142/436 (32%), Gaps = 56/436 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + L SI+ I   + + I+      V+ SGE+      V I S   G + +  V  G
Sbjct: 14  PLWLIMLGSIVFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQGFVVRQFVHEG 73

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G P+   +  ++T    +     +++   +            + D +    E  +
Sbjct: 74  QLIKKGDPVYLIDVSKSTRSGIVTDNHRRDIENQLV-----------RVDNIISRLEESK 122

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  LD L K     +  F      + R+                            +   
Sbjct: 123 KITLDTLEKQRLQYTDAFRRSSDIIQRA-------------------------EEGIKIM 157

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   +N   K  ++++ L  Q  + Y+    L     + +     I  L  +   + 
Sbjct: 158 KNNMENYRNYQAKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQA 217

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++   I +   Q       E+ K  +      +  I +   G +      +        
Sbjct: 218 ADFDNRIYQMELQRY-----ELQKELVNTDVEGEIIIRALTDGKVDSLSV-TVGQMVNTG 271

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI- 373
             L++++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I    
Sbjct: 272 DSLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPAEKFGQFSATVKTISRTP 331

Query: 374 ----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                      + Q+    +  +Y+VI           +  + L NG  AE     +   
Sbjct: 332 ASTQEMLTYKGAPQNTPGASVPWYKVIAMPEKQIIRYDEKYLPLENGMKAESTLFLEKRR 391

Query: 422 LAQEIIHPITDNWPKI 437
           + Q ++ P  D     
Sbjct: 392 IYQWMLSPFYDMKHSA 407


>gi|332291232|ref|YP_004429841.1| hypothetical protein Krodi_0588 [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169318|gb|AEE18573.1| hypothetical protein Krodi_0588 [Krokinobacter diaphorus 4H-3-7-5]
          Length = 451

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 67/418 (16%), Positives = 140/418 (33%), Gaps = 41/418 (9%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSG---EILNEDNVVEIK 60
           F   +  R++    + +   +IIG+I L      LP   +V+  G    +  +     I+
Sbjct: 21  FAKAHKTRHYKYFNRFLLAFAIIGVIVL-----FLPWTQNVNGKGYVTTLTPDQRPQTIQ 75

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           SP  G ++++ V  G  + +G  +L   +I+      L     +  R   D + +A+   
Sbjct: 76  SPIPGRVEQWYVLEGDYVAKGDTILRISEIKNEYQDPLLAERTRQQR---DAKSNAVGSY 132

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
            +K   LE    + + +    L +  +   +      S     +     R  ++      
Sbjct: 133 KSKVVALENQLGALQRERALKLEQAENKLKQARFKVQSDSIDLVAATTNRDIALKQYERT 192

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN-DLNQQERIVYKSTLELRENIHEQKN 239
              ++  L++      K L + +   E   +SQN  L   +  V  +++++     E   
Sbjct: 193 ATLEAEGLKSTADVEDKRLKLQET--EAKLISQNNKLLASKNNVLNASIDISRTSAEYAE 250

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            +       D+ +   A Y  E       N  T  +  S L           I +P  G 
Sbjct: 251 KISKAQS--DKFSASSAQYDTEAQVSKLANASTNYEMRSALQY---------ITAPQNGF 299

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR-------- 351
           I            ++ + L+ I+P      +   V P  +  +  G    V+        
Sbjct: 300 INKAIKSGIGETFKEGEQLVGIMPADYDLAVETFVRPIDLPLIHAGEKIRVQFDGWPAIV 359

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNG 408
           F  + D     +   +  ++  IS           + V++     A     N+ + +G
Sbjct: 360 FSGWPDASFGTYGGTVVAVETFISTNGK-------FRVLIAPDKEAEDWPKNVRVGSG 410


>gi|311103652|ref|YP_003976505.1| hemolysin D [Achromobacter xylosoxidans A8]
 gi|310758341|gb|ADP13790.1| HlyD family secretion family protein 1 [Achromobacter xylosoxidans
           A8]
          Length = 427

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 62/425 (14%), Positives = 145/425 (34%), Gaps = 51/425 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S   +T +    ++ +  +          + SG++  +  ++++  P +GI+ + +V+
Sbjct: 37  PVSFALVTAVLAGFVLTICLFLAFGSYTKRATVSGQLAPDTGLIKLYVPQAGIVLESRVQ 96

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L      + + L + ++     +R   ++ +                  +
Sbjct: 97  EGQHVAAGDVLYVVSGDQQSALGETQEAISGQIRQREESLRL-----------------A 139

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R++ +L    ++ S                   +   + S+      ++N+ +  RA + 
Sbjct: 140 RQKTVLLQQSEHDS-------------------QTAAIASLKAQLAAMDNQIAGQRARIK 180

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +      + L EK  +S  + +Q+   + +   +L+  + ++  +   ++        
Sbjct: 181 LAEDSANRYRGLMEKGYLSAEEADQKRAELLEQRNQLQALLRDRIGLATDLSNR----QA 236

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A+        L Q  R  AD    LT  E  R +  + +P A   V   + ++     
Sbjct: 237 ALADLALRQQNQLAQLDRDMADIAVDLTRSE-ARRRILVSAPQA-GFVTAVAAAAGQAVD 294

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             +PL  IVP             + +  V  G    +RF  Y      +   I++ +   
Sbjct: 295 NKRPLATIVPDGARLQAELLAPSRAVGFVAPGDRVLMRFAAYPYQTFGQQAGIVQTVTRS 354

Query: 374 ISQQ-------DNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQ 424
            S +        NN   ++ + + + +   A       + LR G   E     +   L Q
Sbjct: 355 ASPEWQLNEAAANNGVQEDMFRITVSLDAPARGPQGQTLALRPGMRLEADILQQTRRLYQ 414

Query: 425 EIIHP 429
               P
Sbjct: 415 WAFDP 419


>gi|325287788|ref|YP_004263578.1| secretion protein HlyD family protein [Cellulophaga lytica DSM
           7489]
 gi|324323242|gb|ADY30707.1| secretion protein HlyD family protein [Cellulophaga lytica DSM
           7489]
          Length = 448

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/357 (15%), Positives = 134/357 (37%), Gaps = 19/357 (5%)

Query: 44  VSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           ++S G +           ++S   G ++++ V+ G+ + +G  +L   ++++ D  D   
Sbjct: 56  ITSQGNVTTLKPNQRPQTLQSQIPGRVEQWYVQEGNFVKKGDTILRISEVKS-DYFDENL 114

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
               N    +  + S++    NK D L+   ++ E++    + K     +KV    +   
Sbjct: 115 AQRTN--DQLTAKASSVVAYKNKTDALKNQIKALEQE---RVLKLEQAKNKVAQTALKVT 169

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             S+ ++  ++++   N        +  +  ++   + +  +K++ EK +    ++N + 
Sbjct: 170 SDSIDLEAIKIKADIAN--------TQYQRAIALQAEGIKAVKDVEEKQS-KLQEVNAKL 220

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  L  ++++   K  +  +   Y +   +  + L          +   +   + L
Sbjct: 221 TSQQNKLLSTKQDLVNSKLAIATLRATYADKIAKAQSSLYTAESSGLDTEAQVSKLETSL 280

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              +K      I +P AG I            ++ +PL+ I+P +    +   V+P  + 
Sbjct: 281 ANYKKRSSLLYITAPQAGYINKTIKAGLGETFKEGEPLVHIMPANYDLAVEMYVSPIDLP 340

Query: 341 HVKKGYTATVRFPHYADIREKKFK-AIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
            +  G    V+F  +  I    +           I   +N + T   Y V+LK    
Sbjct: 341 LIHIGEDVRVQFDGWPAIVFSGWPNVSYGTYGAKIVAIENFISTNGKYRVLLKPNAE 397


>gi|262383173|ref|ZP_06076310.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262296051|gb|EEY83982.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 431

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/382 (14%), Positives = 134/382 (35%), Gaps = 32/382 (8%)

Query: 60  KSPFS-------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + P +       G I++  V +   + +G  L   E+   TD       ++         
Sbjct: 63  QHPATAVVTRAAGKIQELLVRDNRPVREGDWLAVIENHADTDDAIYLDKAL--------- 113

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E+S  D +++    L K  E     +        S      NY     Y      + +  
Sbjct: 114 ERSGSD-VDSLDKALSKYKELSLGDMQAAYSGLLSALHACINYREIDYYPQKMASIRKQI 172

Query: 173 SIYLNR-LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           ++Y     + E +   L    +  ++       L+ ++ +S  +       + +S   L 
Sbjct: 173 ALYKAYYNETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLE 232

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 +N+   I E  +++ L+      E    L Q  +T  +++  L  + + R +  
Sbjct: 233 GAAASAENLRIQIGEQ-EQSLLDLTLERSEKEFTLRQELQTAREQL--LNSMNEWRLRYC 289

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATV 350
           +++P+ G + + + ++ + Y    +    +VP  +     + ++   +   V++G  A V
Sbjct: 290 LIAPVGGVVTFTKYWNENQYIPSGEVAFTVVPQGEGRLVGKVRIPIARSGKVRRGQRAIV 349

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL--RNG 408
           RF ++ D        ++  I  + + +        YY   +   +   ++  I+L     
Sbjct: 350 RFSNFPDQEFGVVNGVVSNISLVPTDE--------YYTADIDFPEGLRTNYGIDLPVSPE 401

Query: 409 FPAEVLFTAKNTTLAQEIIHPI 430
             A      +   L +    PI
Sbjct: 402 TQASAEIVTEELRLIERFFLPI 423


>gi|30387000|emb|CAD56173.1| MchE protein [Escherichia coli]
          Length = 424

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 64/436 (14%), Positives = 142/436 (32%), Gaps = 56/436 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + L SI+ I   + + I+      V+ SGE+      V I S   G + +  V  G
Sbjct: 25  PLWLIMLGSIVFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQGFVVRQFVHEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G P+   +  ++T    +     +++   +            + D +    E  +
Sbjct: 85  QLIKKGDPVYLIDISKSTRSGIVTDNHRRDIENQLV-----------RVDNIISRLEESK 133

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  LD L K     +  F      + R+                            +   
Sbjct: 134 KITLDTLEKQRLQYTDAFRRSSDIIQRA-------------------------EEGIKIM 168

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   +N   K  ++++ L  Q  + Y+    L     + +     I  L  +   + 
Sbjct: 169 KNNMENYRNYQAKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQA 228

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++   I +   Q       E+ K  +      +  I +   G +      +        
Sbjct: 229 ADFDNRIYQMELQRY-----ELQKELVNTDVEGEIIIRALTDGKVDSLSV-TVGQMVNTG 282

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI- 373
             L++++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I    
Sbjct: 283 DSLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPAEKFGQFSATVKTISRTP 342

Query: 374 ----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                      + Q+    +  +Y+VI           +  + L NG  AE     +   
Sbjct: 343 ASTQEMLTYKGAPQNTPGASVPWYKVIAMPEKQIIRYDEKYLPLENGMKAESRLILEKRR 402

Query: 422 LAQEIIHPITDNWPKI 437
           + Q ++ P  D     
Sbjct: 403 IYQWMLSPFYDMKHSA 418


>gi|254420936|ref|ZP_05034660.1| auxiliary transport protein, MFP family [Brevundimonas sp. BAL3]
 gi|196187113|gb|EDX82089.1| auxiliary transport protein, MFP family [Brevundimonas sp. BAL3]
          Length = 414

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/423 (8%), Positives = 117/423 (27%), Gaps = 49/423 (11%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              + + +L+   ++    ++         + SG +  E  ++ + +   G++ +  VE 
Sbjct: 27  TPSRVLGVLACAIVLAGALFASTASYARRETVSGWLAPEAGLIRVPARQGGVVAQLHVEE 86

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++  G P+ T          D                                     
Sbjct: 87  GQRLEVGQPIATVTLSSALQSGDSYVA--------------------------------- 113

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
              L +                  ++    +    R  ++     +   +  L R  L  
Sbjct: 114 ---LSESFATQGVAAQARAQAARQALEAEHRQMTGRRAALLRELSETRRRIGLQRQRLEF 170

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            + +++  + +  +  + + +L  +         EL E   E     R I     E +  
Sbjct: 171 ARSEVSRAETIAAQGYLPRRELESRRSAELVVDQELSELSAEALTYEREI----GEVDAR 226

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A    +++    +     A    ++T          +++ +AG +            + 
Sbjct: 227 LAAIPIDLAAAAAEASTARAGLDQQVTQAAVQSTY-VVVATVAGRVAALPVN-QGQTVEP 284

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              +  +               +    + +G    + +  +   +    + ++  +   +
Sbjct: 285 GVAIAVMTAGDSPLEAELYAPTRASGFIHEGQDVRLMYQAFPHEKFGTGEGVVTSVSRTV 344

Query: 375 SQQ-----DNNLQTQEYYEVILKI--TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
                        ++  + V +++    +A     + L+ G            +L + ++
Sbjct: 345 LAPAEVAIPGLQVSEPVFRVRVRMKSDTVAAYGRRVPLQPGMLLNADVVIDRRSLLEWLL 404

Query: 428 HPI 430
            P+
Sbjct: 405 DPL 407


>gi|284922930|emb|CBG36021.1| microcin H47 secretion protein [Escherichia coli 042]
          Length = 413

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 64/436 (14%), Positives = 142/436 (32%), Gaps = 56/436 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + L SI+ I   + + I+      V+ SGE+      V I S   G + +  V  G
Sbjct: 14  PLWLIMLGSIVFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQGFVVRQFVHEG 73

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G P+   +  ++T    +     +++   +            + D +    E  +
Sbjct: 74  QLIKKGDPVYLIDISKSTRSGIVTDNHRRDIENQLV-----------RVDNIISRLEESK 122

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  LD L K     +  F      + R+                            +   
Sbjct: 123 KITLDTLEKQRLQYTDAFRRSSDIIQRA-------------------------EEGIKIM 157

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   +N   K  ++++ L  Q  + Y+    L     + +     I  L  +   + 
Sbjct: 158 KNNMENYRNYQAKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQA 217

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++   I +   Q       E+ K  +      +  I +   G +      +        
Sbjct: 218 ADFDNRIYQMELQRY-----ELQKELVNTDVEGEIIIRALTDGKVDSLSV-TVGQMVNTG 271

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI- 373
             L++++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I    
Sbjct: 272 DSLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPAEKFGQFSATVKTISRTP 331

Query: 374 ----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                      + Q+    +  +Y+VI           +  + L NG  AE     +   
Sbjct: 332 ASTQEMLTYKGAPQNTPGASVPWYKVIAMPEKQIIRYDEKYLPLENGMKAESTLFLEKRR 391

Query: 422 LAQEIIHPITDNWPKI 437
           + Q ++ P  D     
Sbjct: 392 IYQWMLSPFYDMKHSA 407


>gi|126656765|ref|ZP_01727979.1| hypothetical protein CY0110_24041 [Cyanothece sp. CCY0110]
 gi|126621985|gb|EAZ92693.1| hypothetical protein CY0110_24041 [Cyanothece sp. CCY0110]
          Length = 864

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 72/462 (15%), Positives = 157/462 (33%), Gaps = 78/462 (16%)

Query: 8   NLKRNHPASLKRMTLLSII-GIIGLITWSILLPIEI--------------------SVSS 46
           NLK   P     ++LL    G  G+   S    +                      +V+S
Sbjct: 432 NLKALKPNPWWLISLLVAAAGATGIFGLSTFYRLSSRESTSDSNATTTVEPNSATTTVTS 491

Query: 47  SGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIETT-DLIDLKKVS 102
            G I+ +  V  + +        IK+  VE G  + +G  +   +  +     +   K  
Sbjct: 492 IGRIVPQGKVTRLSASIPDEGARIKEMLVEEGESVDKGQIIAILDSYDRQLATLKQAKQE 551

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +K  +  ++  K+              A +++   +  F  +       +    I+S+  
Sbjct: 552 VKVAQARLEQVKAGAK---------SGAIKAQSGTVNRFQAELEGQLV-IQEAKIASLQA 601

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS---------- 212
            L+ + T            +     L+A  ++ Q +      L+ +  VS          
Sbjct: 602 QLQGQKTTQ----------QETIERLQAEFNNAQTECKRYDQLYREGVVSASEYDSKCLQ 651

Query: 213 ----QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---- 264
               + +L++ +  + +    L  +I E +  L           +E    L+EI+     
Sbjct: 652 ATTFREELDEAQADLTRIVTTLSSDIREAQAGLTRSQRTLQSQIIEAQATLEEIAEVRPV 711

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           D+E  Q      ++ +   E   +   + SP+ G+++     + +  A  SQ +  I   
Sbjct: 712 DVEVAQAELDKAITAVQQAEANLQLSYVRSPLKGSVLEL--HTRAGEAVTSQGIADIGKT 769

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD------ 378
            ++  I A++    I H++    AT+  P +     K  +  +  I   + QQD      
Sbjct: 770 DQMEVI-AEIYKTDIGHIRLDQKATITSPAFD----KTLQGTVSHIGLQVKQQDIFSNEP 824

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           ++   ++  EV +++   +     +        EV    K+ 
Sbjct: 825 SSDVDRKVIEVKIRLDPQSS--QQVAQLTNLQVEVAIDTKSK 864


>gi|313206647|ref|YP_004045824.1| biotin/lipoyl attachment domain-containing protein [Riemerella
           anatipestifer DSM 15868]
 gi|312445963|gb|ADQ82318.1| biotin/lipoyl attachment domain-containing protein [Riemerella
           anatipestifer DSM 15868]
          Length = 434

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 134/368 (36%), Gaps = 38/368 (10%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT----DLIDLKKVSIKNLRC 108
           E     I+SP  G I  + V+NG Q+ +G  LL   +I+       L+   +  I     
Sbjct: 53  EQRPQSIQSPIPGKIIHWYVKNGDQVKKGDTLLRISEIKEDYMDPLLVQRAEDQINAKDN 112

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             D   + +  +  + D L  A E +  Q+   L + +   +   N  + +     +M  
Sbjct: 113 VRDYYSAKIKTIGGQLDALNAARELKLNQIRIKLQQLNFKINAT-NAELQAANNEFRMAE 171

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            + R         E     L +L    +++++    L +KN++        E  + ++  
Sbjct: 172 DQYRRQE------EMYKQGLVSLTDFQRRNVSYQNALAKKNSI--------ENKLAEAQQ 217

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E+     EQ   ++  NE   +   E    + +++     +    A   +++T  +  + 
Sbjct: 218 EILSLQVEQNATIQDYNEKISKLEGERFQSMGQVAG----SDGEIAKLQTQVTNYKVRQG 273

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           Q  I++   G I            ++ + +  IVP S    +   V+P  +  +++G   
Sbjct: 274 QYYIIATQDGQITQLSKTGIGEIIKEGENIGIIVPKSVKYAVEFYVSPVDLPLLQEGQKI 333

Query: 349 T--------VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
                    + F  + +     F   I  +       +NN+     ++V++  +      
Sbjct: 334 RCTFDGFPAIVFSGWPNSSYGTFPGKIIAV-------ENNISQNGMFKVVVVESGDKKWP 386

Query: 401 NNIELRNG 408
            NI++  G
Sbjct: 387 PNIKMGAG 394


>gi|83721340|ref|YP_443455.1| secretion protein [Burkholderia thailandensis E264]
 gi|83655165|gb|ABC39228.1| secretion protein, putative [Burkholderia thailandensis E264]
          Length = 538

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 123/398 (30%), Gaps = 52/398 (13%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +  G +  +  +V++ +  +G++ K  V  G  + +G  L T                 
Sbjct: 175 TTVDGVLTPDTGLVKVYAQQTGVVLKKNVVEGQHVTRGQMLYTVST-------------- 220

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                D+   A    +  L+D   +  ++  +  +         
Sbjct: 221 ---------------------DLQSAAAGQTQAALIDQAQQRKASLQQELDKTKRLQQDE 259

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                +++ S+      ++++ +  R   S      +    L  ++ +S++   Q+E  +
Sbjct: 260 RDTLQSKIASLRAELAGIDDQIAAQRTRTSLAADAASRYAGLLAQDYISKDQAQQREADL 319

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
               L+ R  ++          +   EA  + +    +    L Q  R+  D    L   
Sbjct: 320 ----LDQRSKLNSLMRDRASTAQTLKEALNDLSGLSLKQQNQLSQIDRSVIDVDRTLIES 375

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E  RE   + +P  GT            A  S PL  IVP          V    +  V 
Sbjct: 376 EAKRE-FVVTAPETGTATAV-IAEPGQTADTSHPLASIVPTDAHWQAYLFVPSAAVGFVH 433

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN---------NLQTQEYYEVILKIT 394
            G    VR+  Y   +  +++A +  I                     +  YY + + + 
Sbjct: 434 VGDRVLVRYQAYPYQKFGQYEASVVSIARTALSAAELATSGGPAAQTSSGTYYRITVALK 493

Query: 395 DLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             + +       L+ G   +     +   L + ++ P+
Sbjct: 494 SQSVTAYGKAQPLQAGMALQADILQERRRLYEWVLEPL 531


>gi|326572061|gb|EGE22062.1| hypothetical protein E9S_01364 [Moraxella catarrhalis BC7]
          Length = 420

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 60/431 (13%), Positives = 134/431 (31%), Gaps = 55/431 (12%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
            P S   +T  + +  + L+ + +        +  G+++ +  +V++ +  +G+I +  V
Sbjct: 25  TPISFAFLTFCAFMAGLVLMIFLVWGEYTKRSTVKGQLIPDKGLVQVYTTTAGVIIEKYV 84

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  +  G  L        TD  +++ +  K L                K  ++E    
Sbjct: 85  SEGQAVKAGDMLYKISTTRHTDAGNVQSIIDKEL--------------TFKRQLIEHEIT 130

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             ++          +T                      +  + ++   L+ +  L    +
Sbjct: 131 RTKQAQAAEKRNIANT----------------------IERLQVDMDKLQAQIELQTHQV 168

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +  ++ LT  +   +  AVS+ +L  Q          L       +     I +   E  
Sbjct: 169 AIAKETLTRYEFAMQSEAVSKQELESQTMAYNTQLNSL----TALEREKEMIAKQIKEQT 224

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           +       E    L Q +RT +D  S  +I  +  +   I + + G +          + 
Sbjct: 225 IALFRLEHEHRTTLLQYERTLSDNKSD-SIQNQANDTLIIKAQVDG-VASVAHADVGQFV 282

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             SQ L+ I+P+         V  + I  VK      +R+  Y   +    K  I  +  
Sbjct: 283 DSSQSLVSILPNDSYLIAVMYVPSRAIGFVKTDDEVLLRYVAYPYQKFGHAKGRIISVAK 342

Query: 373 I-----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKN 419
                              +  +  Y +   +     +     + L  G   E     + 
Sbjct: 343 TAHAGQNLPTIGTVSATEQIANEPMYVIKAYLDKQTITAYGKELPLAVGMTLEGDVMHET 402

Query: 420 TTLAQEIIHPI 430
             L + ++ P+
Sbjct: 403 RKLYEWVLEPL 413


>gi|17379918|sp|Q9EXN6|MCHE_ECOLX RecName: Full=Microcin H47 secretion protein mchE
 gi|83408546|emb|CAJ44958.1| MchE protein [Escherichia coli]
          Length = 424

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 64/436 (14%), Positives = 142/436 (32%), Gaps = 56/436 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + L SI+ I   + + I+      V+ SGE+      V I S   G + +  V  G
Sbjct: 25  PLWLIMLGSIVFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQGFVVRQFVHEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G P+   +  ++T    +     +++   +            + D +    E  +
Sbjct: 85  QLIKKGDPVYLIDISKSTRSGIVTDNHRRDIENQLV-----------RVDNIISRLEESK 133

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  LD L K     +  F      + R+                            +   
Sbjct: 134 KITLDTLEKQRLQYTDAFRRSSDIIQRA-------------------------EEGIKIM 168

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   +N   K  ++++ L  Q  + Y+    L     + +     I  L  +   + 
Sbjct: 169 KNNMENYRNYQAKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQA 228

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++   I +   Q       E+ K  +      +  I +   G +      +        
Sbjct: 229 ADFDNRIYQMELQRY-----ELQKELVNTDVEGEIIIRALTDGKVDSLSV-TVGQMVNTG 282

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI- 373
             L++++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I    
Sbjct: 283 DSLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPAEKFGQFSATVKTISRTP 342

Query: 374 ----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                      + Q+    +  +Y+VI           +  + L NG  AE     +   
Sbjct: 343 ASTQEMLTYKGAPQNTPGASVPWYKVIAMPEKQIIRYDEKYLPLENGMKAESTLFLEKRR 402

Query: 422 LAQEIIHPITDNWPKI 437
           + Q ++ P  D     
Sbjct: 403 IYQWMLSPFYDMKHSA 418


>gi|318606144|emb|CBY27642.1| putative microcin H47 secretion ATP-binding protein mchF [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 427

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 70/426 (16%), Positives = 140/426 (32%), Gaps = 51/426 (11%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S     +L+++ I  LI + +L         +G +++   V  I +P  GII     E
Sbjct: 29  PVSASVWAMLALVLIASLIAFLVLGTYTQKARLAGSVVHHPAVARIIAPRDGIIVSSLAE 88

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  +        T+    +  +   L+    T +  +   +   D+       
Sbjct: 89  EGKTVRAGEVIYVVNMETQTEFGGTRHETAAALKLQKATIEREIKLKSEAADI------- 141

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                                             L  + +  + +  +++         S
Sbjct: 142 -----------------------------EQNFLLLSLENKEVEQQKMDDLIGKSTQQTS 172

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              + +   K L  +    + +   +    Y + ++L     E+  +   I         
Sbjct: 173 WLLEKVQHFKELVRQGIALETEHMSRRSEYYSAAVQLENYKREKVRLQGEIVN----IKA 228

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + A    EI   LE   R  A     L  +E+ RE   I SPI GT+      +  N  +
Sbjct: 229 QLAAIHSEIEVSLEILHRQTARLDQDLISIEEQRE-LQITSPIDGTLTGITGLA-GNTIR 286

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP- 372
            +Q L  +VP S    +    T   I  +++G    +RF  Y      ++  I+  I   
Sbjct: 287 AAQELACVVPTSGQVEVEIFATADTIGELREGQAVRLRFDAYPYQWFGQYDGIVRSISTT 346

Query: 373 ------IISQQDNNLQTQEYYEVILKITDLA--FSDNNIELRNGFPAEVLFTAKNTTLAQ 424
                  IS++  +   + Y++V +   + A   +     LR G   +     +   L +
Sbjct: 347 SVEQRLDISEKQAHQPQRHYFQVRIIPKNNAVVMAGETYPLRPGIGVQTDVFIRKRPLYE 406

Query: 425 EIIHPI 430
            ++ P+
Sbjct: 407 WLLLPL 412


>gi|332520331|ref|ZP_08396793.1| secretion protein HlyD family protein [Lacinutrix algicola
           5H-3-7-4]
 gi|332043684|gb|EGI79879.1| secretion protein HlyD family protein [Lacinutrix algicola
           5H-3-7-4]
          Length = 448

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 57/340 (16%), Positives = 123/340 (36%), Gaps = 33/340 (9%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT----DLIDLKKVSIK 104
            +  +     I+SP  G I+K+ V  G  + +G  +L   +++      DL+ +    I 
Sbjct: 64  TLTPDQRPQSIQSPIPGRIEKWFVREGDFVKKGDTILFISEVKNDYFNPDLVKITGQQIN 123

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           +    +++    +  LNN+   L K    R  ++     K      K+ +  I       
Sbjct: 124 SKTASVESYGLKVKALNNQISALSKE---RVLKIKQAENKLLQAKLKMKSDSIDFEAAKT 180

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIV 223
            +++ R +      L+ E     L++L    QK L + +   +   +SQ N     +  +
Sbjct: 181 NIEIARKQLNRAEILEKE----GLKSLTDVEQKRLKLQET--QAKLISQENKFLASKNEI 234

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             + +E+        + +       D+   E   Y  E+     +N RT  +  + +   
Sbjct: 235 LNARVEINRLKASYIDKISKAQS--DKFTAESNQYDAEVQVSKLENNRTNYEIRNAM--- 289

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
                   I +P+ G I            ++ + ++ I+P +    +   + P  +  V 
Sbjct: 290 ------YYIKAPLDGYINKALKTGIGERFKEGERIVGIMPANYDLAVETYIDPIDLPLVH 343

Query: 344 KGYTATVR--------FPHYADIREKKFKAIIEKIDPIIS 375
            G T  V+        F  + ++    + A +  I+  IS
Sbjct: 344 IGETFRVQFDGWPAIVFSGWPNVSYGTYGAKVIAIENFIS 383


>gi|150009526|ref|YP_001304269.1| putative hemolysin secretion transport system membrane protein
           [Parabacteroides distasonis ATCC 8503]
 gi|149937950|gb|ABR44647.1| putative hemolysin secretion transport system membrane protein
           [Parabacteroides distasonis ATCC 8503]
          Length = 430

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 55/381 (14%), Positives = 135/381 (35%), Gaps = 30/381 (7%)

Query: 60  KSPFS-------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + P +       G I++  V +   + QG  L   E+   TD       +++     +D+
Sbjct: 62  QHPATAVVTRAAGKIQELLVRDNRPVRQGDWLAVIENHADTDDAIYLDKALERSGSDVDS 121

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
              AL          E +    +      L   H+  +            S++ ++   +
Sbjct: 122 LDKAL------SKYKELSLGDMQAAYSGLLSALHACVNYREIDYYPQKMASIRKQIALYK 175

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           + Y    + E +   L    +  ++       L+ ++ +S  +       + +S   L  
Sbjct: 176 AYYN---ETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEG 232

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                +N+   I E  +++ L+      E    L Q  +T  +++  L  + + R +  +
Sbjct: 233 ASASAENLRIQIGEQ-EQSLLDLTLERSEKEFTLRQELQTAREQL--LNSMNEWRLRYCL 289

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVR 351
           ++P+ G + + + ++ + Y    +    +VP  +     + ++   +   V++G  A VR
Sbjct: 290 IAPVGGVVTFTKYWNENQYIPSGEVAFTVVPQGEGRLVGKVRIPIARSGKVQRGQRAIVR 349

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL--RNGF 409
           F ++ D        ++  I  + + +        YY   +   +   ++  I+L      
Sbjct: 350 FSNFPDQEFGVVNGVVSNISLVPTDE--------YYTADIDFPEGLRTNYGIDLPVSPET 401

Query: 410 PAEVLFTAKNTTLAQEIIHPI 430
            A      +   L +    PI
Sbjct: 402 QASAEIVTEELRLIERFFLPI 422


>gi|166709932|ref|ZP_02241139.1| colicin V secretion protein [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 422

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 65/423 (15%), Positives = 132/423 (31%), Gaps = 58/423 (13%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILN-EDNVVEIKSPFSG-IIKKFQVENG 75
             + LL + G+     +S    I       G ++        +    SG  + +  V  G
Sbjct: 35  ATLILLIMTGLALFGRYSRTEKI------VGRLIPLAGQANVVAPQASGETVAEVLVSEG 88

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            Q++ G PL+                S ++     DT K     + +K   L+ + ES++
Sbjct: 89  DQVMIGQPLVRV-------------SSQRSSASSSDTGKLISAQITSKLQQLKASVESQQ 135

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             L            ++    I+ +   +K +  R ++       L  K+S L +     
Sbjct: 136 R-LSVLKEHDLRDRIELLRARIAMLTLQIKNQDIRYKAANALYEKLRTKASGLVSGYQLA 194

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+  T ++       V    L        ++ LEL ++  E   +    +E     N++ 
Sbjct: 195 QQYDTALQQKSLTQDVRNQRL--------QAMLELNQSEAELIQLPHITDERIVALNVQI 246

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A+   E                       + R  + I + I G +V   +        ++
Sbjct: 247 ADVENE-------------------KAENEQRRSQVIHASIDGIVVNVLAH-PGMAVDEA 286

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM I+P +             +  ++ G    + +  +   R  + +  I  I     
Sbjct: 287 SQLMVILPRNSKLVAELWAPSSAVGLLQVGKPVDISYDAFPAARYGRQRGKIISISTNTV 346

Query: 376 QQ------DNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEII 427
                     + Q    Y VI+ I D + S        + G         +  +L   ++
Sbjct: 347 SALEIGRILGSAQPSSGYRVIVAIDDASSSSFLRRFAEKPGMTLTAKVDVETRSLIDWML 406

Query: 428 HPI 430
            P 
Sbjct: 407 RPF 409


>gi|115377447|ref|ZP_01464650.1| secretion protein, HlyD family [Stigmatella aurantiaca DW4/3-1]
 gi|310823952|ref|YP_003956310.1| secretion family protein HlyD [Stigmatella aurantiaca DW4/3-1]
 gi|115365545|gb|EAU64577.1| secretion protein, HlyD family [Stigmatella aurantiaca DW4/3-1]
 gi|309397024|gb|ADO74483.1| Secretion protein, HlyD family [Stigmatella aurantiaca DW4/3-1]
          Length = 410

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/381 (11%), Positives = 111/381 (29%), Gaps = 44/381 (11%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E  +  +    +G + K  V++   +  G  L+  +  +    + + +  + +    + 
Sbjct: 60  VEGRIGNVAPRVAGQVMKVLVKDNQPVKAGDVLVELDRSDLDAKLQVAQADVLSAEAQLS 119

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ L                                       +      +    + +
Sbjct: 120 NAQAQLALTEANA-----------------------------GATLRQAQAGVTQASSGI 150

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            S            + + A       +L  +K L  + A+S  +L+ ++    ++   L 
Sbjct: 151 SSSKAALEQARADVASVEARFRLTDTELARVKRLAAEGALSPAELDTRQAAYDQAKAALD 210

Query: 232 ENIHEQKNMLRHINELYDEANLEFAN---------YLKEISRDLEQNQRTFADEMSKLTI 282
           +      +    I                       ++     L+  +       + L +
Sbjct: 211 QAKARLASTEAGITSSSGGLEAAQGKLVAAQTGPVQVQAAQAALKLAEARLQQSRASLHL 270

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            E       + +PI G +V  ++          +PLM IVP   +  + A     Q+  +
Sbjct: 271 AELAVSYTQVRAPING-VVSRRTVEVGQMVGPERPLMAIVPQDDVWVV-ANFKEDQVGGM 328

Query: 343 KKGYTATVRFPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           + G    V+   +     +    ++        +    +  +  + +V+ +I  L   D 
Sbjct: 329 RPGQPVDVKVDAFGSQHFRAHVDSLAGASGARFALLPPDNASGNFVKVVQRIPVLVRFDG 388

Query: 402 N---IELRNGFPAEVLFTAKN 419
           +   + L+ G  A V    + 
Sbjct: 389 DLKELPLKPGMSAVVTVDTRE 409


>gi|188535458|ref|YP_001909255.1| Putative microcin L transport protein [Erwinia tasmaniensis Et1/99]
 gi|188030500|emb|CAO98395.1| Putative microcin L transport protein [Erwinia tasmaniensis Et1/99]
          Length = 427

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 70/453 (15%), Positives = 151/453 (33%), Gaps = 66/453 (14%)

Query: 6   WKNLKRNHPA-SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           W+      P      M  LS+  II  +T+ I+      V+ +GEI        + S   
Sbjct: 14  WRGRALLLPGIPFWIMAGLSLFFIIAFLTFVIVGSYNRRVNVTGEISTYPRAANVYSAVR 73

Query: 65  GIIKKFQVENGSQILQGTPLLTFE---DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           G++ K  V  G  I  G+P+   +      +  + D +   I N    I    S L    
Sbjct: 74  GVVVKQFVNEGELIRAGSPVYQIDVSKSTRSGVVSDNQYRDINNQLARITQMISRL---- 129

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                     ES ++  L+ L K     ++ F +    ++R+ +                
Sbjct: 130 ----------ESSKKDTLEMLEKQKVQYTRAFQHSNDIIHRAQEGV-------------- 165

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                    ++  + +++   +    K  ++++ L  Q  + Y+    L     + +   
Sbjct: 166 --------RIIKENMENMENYRQYQAKGLINKDQLTNQVALYYQQQNSLLGLSGQNEQNA 217

Query: 242 RHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           R I  L  + +++ A+Y  +I +      + Q+   +  +   I+ +            G
Sbjct: 218 RQITALESQIHIKAADYDNQIYQMELQRYERQKELLNIDADGAIIVRVLT--------DG 269

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
            I      +          L+++ PH+     +   V    I ++  G    +R+  +  
Sbjct: 270 RIDSLSV-TVGQMVNAGDSLLQLTPHNVDHYSLILWVPNDAIPYINAGDRVNIRYEAFPA 328

Query: 358 IREKKFKAIIEKIDPI-----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIE 404
            +  +F   +  I               + +D       YY+VI++    + +    ++ 
Sbjct: 329 EKFGQFAGTVSVISKTPASPQEMMTWQGAPRDAPTAAIPYYKVIVRPEKQSVAYGGKHLS 388

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           L NG  A      +   + Q ++ P  D     
Sbjct: 389 LENGMKAHSTLFLEKRKIYQWMLSPFYDMKHSA 421


>gi|150009753|ref|YP_001304496.1| putative hemolysin secretion transport system membrane protein
           [Parabacteroides distasonis ATCC 8503]
 gi|149938177|gb|ABR44874.1| putative hemolysin secretion transport system membrane protein
           [Parabacteroides distasonis ATCC 8503]
          Length = 431

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 55/381 (14%), Positives = 135/381 (35%), Gaps = 30/381 (7%)

Query: 60  KSPFS-------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + P +       G I++  V +   + QG  L   E+   TD       +++     +D+
Sbjct: 63  QHPATAVVTRAAGKIQELLVRDNRPVRQGDWLAVIENHADTDDAIYLDKALERSGSDVDS 122

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
              AL          E +    +      L   H+  +            S++ ++   +
Sbjct: 123 LDKAL------SKYKELSLGDMQAAYSGLLSALHACVNYREIDYYPQKMASIRKQIALYK 176

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           + Y    + E +   L    +  ++       L+ ++ +S  +       + +S   L  
Sbjct: 177 AYYN---ETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEG 233

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                +N+   I E  +++ L+      E    L Q  +T  +++  L  + + R +  +
Sbjct: 234 ASASAENLRIQIGEQ-EQSLLDLTLERSEKEFTLRQELQTAREQL--LNSMNEWRLRYCL 290

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVR 351
           ++P+ G + + + ++ + Y    +    +VP  +     + ++   +   V++G  A VR
Sbjct: 291 IAPVGGVVTFTKYWNENQYIPSGEVAFTVVPQGEGRLVGKVRIPIARSGKVQRGQRAIVR 350

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL--RNGF 409
           F ++ D        ++  I  + + +        YY   +   +   ++  I+L      
Sbjct: 351 FSNFPDQEFGVVNGVVSNISLVPTDE--------YYTADIDFPEGLRTNYGIDLPVSPET 402

Query: 410 PAEVLFTAKNTTLAQEIIHPI 430
            A      +   L +    PI
Sbjct: 403 QASAEIVTEELRLIERFFLPI 423


>gi|301312371|ref|ZP_07218288.1| putative hemolysin secretion transport system membrane protein
           [Bacteroides sp. 20_3]
 gi|300829793|gb|EFK60446.1| putative hemolysin secretion transport system membrane protein
           [Bacteroides sp. 20_3]
          Length = 431

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 55/381 (14%), Positives = 135/381 (35%), Gaps = 30/381 (7%)

Query: 60  KSPFS-------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + P +       G I++  V +   + QG  L   E+   TD       +++     +D+
Sbjct: 63  QHPATAVVTRAAGKIQELLVRDNRPVRQGDWLAVIENHADTDDAIYLDKALERSGSDVDS 122

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
              AL          E +    +      L   H+  +            S++ ++   +
Sbjct: 123 LDKALSRYK------ELSLGDMQAAYSGLLSALHACINYREIDYYPQKMTSIRKQIALYK 176

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           + Y    + E +   L    +  ++       L+ ++ +S  +       + +S   L  
Sbjct: 177 AYYN---ETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEG 233

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                +N+   I E  +++ L+      E    L Q  +T  +++  L  + + R +  +
Sbjct: 234 AAASAENLRIQIGEQ-EQSLLDLTLERSEKEFTLRQELQTAREQL--LNSMNEWRLRYCL 290

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVR 351
           ++P+ G + + + ++ + Y    +    +VP  +     + ++   +   V++G  A VR
Sbjct: 291 IAPVGGVVTFTKYWNENQYIPSGEVAFTVVPQGEGRLVGKVRIPIARSGKVRRGQRAIVR 350

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL--RNGF 409
           F ++ D        ++  I  + + +        YY   +   +   ++  I+L      
Sbjct: 351 FSNFPDQEFGVVNGVVSNISLVPTDE--------YYTADIDFPEGLRTNYGIDLPVSPET 402

Query: 410 PAEVLFTAKNTTLAQEIIHPI 430
            A      +   L +    PI
Sbjct: 403 QASAEIVTEELRLIERFFLPI 423


>gi|315022144|gb|EFT35173.1| secretion protein HlyD family protein [Riemerella anatipestifer
           RA-YM]
          Length = 434

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 61/368 (16%), Positives = 134/368 (36%), Gaps = 38/368 (10%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT----DLIDLKKVSIKNLRC 108
           E     I+SP  G I  + V+NG Q+ +G  LL   +I+       L+   +  I     
Sbjct: 53  EQRPQSIQSPIPGKIIHWYVKNGDQVKKGDTLLRISEIKEDYMDPLLVQRAEDQINAKDN 112

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             D   + +  +  + D +  A E +  Q+   L + +   +   N  + +     +M  
Sbjct: 113 VRDYYSAKIKTIGGQLDAMNAARELKLNQIRIKLQQLNFKINAT-NAELQAANNEFRMAE 171

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            + R         E     L +L    +++++    L +KN++        E  + ++  
Sbjct: 172 DQYRRQE------EMYKQGLVSLTDFQRRNVSYQNALAKKNSI--------ENKLAEAQQ 217

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E+     EQ   ++  NE   +   E    + ++S     +    A   +++T  +  + 
Sbjct: 218 EILSLQVEQNATIQDYNEKISKLEGERFQSMGQVSG----SDGEIAKLQTQVTNYKVRQG 273

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           Q  I++   G I            ++ + +  IVP S    +   V+P  +  +++G   
Sbjct: 274 QYYIIATQDGQITQLSKTGIGEIIKEGENIGIIVPKSVKYAVEFYVSPVDLPLLQEGQKI 333

Query: 349 T--------VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
                    + F  + +     F   I  +       +NN+     ++V++  +      
Sbjct: 334 RCTFDGFPAIVFSGWPNSSYGTFPGKIIAV-------ENNISQNGMFKVVVVESGDKKWP 386

Query: 401 NNIELRNG 408
            NI++  G
Sbjct: 387 PNIKMGAG 394


>gi|255034515|ref|YP_003085136.1| secretion protein HlyD family protein [Dyadobacter fermentans DSM
           18053]
 gi|254947271|gb|ACT91971.1| secretion protein HlyD family protein [Dyadobacter fermentans DSM
           18053]
          Length = 442

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 51/376 (13%), Positives = 113/376 (30%), Gaps = 66/376 (17%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILN---EDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ I+ +   + W        ++ + G + +   E    +I SP  G I ++ V+ G  
Sbjct: 31  GIMIILVLGLFLPW------TQNIKAPGSLTSLYQEQRPQDINSPIPGRIARWFVKEGDF 84

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  ++   +I                                K D L+    +R +Q
Sbjct: 85  VQKGDTIVQISEI--------------------------------KEDYLDPKLVNRTQQ 112

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            +                  S +      +  +++ +      LE+K +  +A L +   
Sbjct: 113 QVQAKKDAIEYYKGKAATATSQIQALQASQKLKIQQLKNKLGQLESKLASEQADLEAANN 172

Query: 198 DLTM-------MKNLFEKNAVSQNDLNQQE---RIVYKSTLELRENIHEQKNMLRHINEL 247
           +  +        + + ++  VS+  L Q+    R      +     + + K  +      
Sbjct: 173 EFNLAKDQYERQEKMQQEGLVSKTQLQQRNTAFRNAMAKRVTAENKVAQTKQEILITQIE 232

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-------SPIAGTI 300
            +    E+A  + +   +  Q+    A    ++  LE      TI        +P  G I
Sbjct: 233 QNGVEQEYAEKISKTEGERLQSLSNIASGEGEMAKLENQVTNYTIRNGMYIITAPQDGQI 292

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR- 359
           V           +  + +  IVP      +   V P  +  +  G      F  +  I  
Sbjct: 293 VQASKAGIGEILKDGERITVIVPTRTQYAVEMYVRPVDLPLISVGQKVRFLFDGFPAIIF 352

Query: 360 -------EKKFKAIIE 368
                     F   + 
Sbjct: 353 SGWPENSYGTFGGKVV 368


>gi|238797017|ref|ZP_04640520.1| Auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia mollaretii ATCC 43969]
 gi|238719062|gb|EEQ10875.1| Auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia mollaretii ATCC 43969]
          Length = 443

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 64/426 (15%), Positives = 146/426 (34%), Gaps = 57/426 (13%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           LS++ I+ L+T  I       ++  GE+      + I +   G I +  V  G ++++G 
Sbjct: 50  LSLVIIVILLTAIIFGDYTRRINVYGEVTTFPRSINIFASQQGFITQVLVNVGDEVVKGD 109

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L   +  + TD   + K S + +   +   +S +  + N             + +    
Sbjct: 110 VLYQIDVSKVTDSGRVSKNSQQAIERQLVQIESIIKKIENN------------KIVTLNH 157

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            +      +V     S + +  +  +  MR +  +  + +                    
Sbjct: 158 IQDKKRKYEVAYKQSSLLVKESQQNVESMRKVAESYSEYQ-------------------- 197

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
                K  ++   +  Q+   Y+     +    +       I  L  E     A++  +I
Sbjct: 198 ----RKGLITNEQVISQKISYYQQQSTFQSLYSQNMQEALQITNLDSEIITRAADFDNQI 253

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           S    Q Q  + D   +L           + +P+AG I      ++         L ++V
Sbjct: 254 S----QYQLQYGDLQRQL-AETDATGALVVNAPVAGRIESLSV-TTGQMVNMGDSLAQLV 307

Query: 323 P-HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ----- 376
           P  + + Y+   +    + +V KG    +R+  +   +  +F   I+ +  + +      
Sbjct: 308 PGTNTIYYLVLWLPNNAVPYVAKGDHVNIRYDAFPFEKFGQFSGRIDTLSTVPASLQEMD 367

Query: 377 -------QDNNLQTQEYYE--VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
                  +  ++ ++ YY+  V++  T L+     + L  G  A+     +   L Q + 
Sbjct: 368 SYSNTPLRHPSMGSESYYKTLVLIDKTQLSHQGKVLYLAGGMKAQSTLFLEKRPLYQWMF 427

Query: 428 HPITDN 433
            P  D 
Sbjct: 428 SPFYDM 433


>gi|196037195|ref|ZP_03104510.1| hypothetical protein BCW_B0078 [Bacillus cereus W]
 gi|195990299|gb|EDX54352.1| conserved hypothetical protein [Bacillus cereus W]
          Length = 437

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 53/428 (12%), Positives = 156/428 (36%), Gaps = 22/428 (5%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+R  P  +  +  L  + +IG + W+ +   ++    +  I  + ++   K+  +GI+ 
Sbjct: 17  LERKPPRFIAVLLSLLFLSLIGFMIWAYVGKFDVVSKGTAIIQGKTDISVSKTEIAGIVD 76

Query: 69  KFQVENGSQILQGTPLLTFED---IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
             +V++G ++ +G  L+  ++       + ++     ++  R  ++  K ++      + 
Sbjct: 77  NVKVKSGDEVKKGDILIQLKNQELTNRQNQVNQIVKYLEEKRGMLEQLKQSIQVHQFSFS 136

Query: 126 V-----LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                 +++ +++ E+       +  +    + N  +S+    +   L   +      ++
Sbjct: 137 NGVDTKIKEEYKTYEQGYQSLQNEKENEIEVIENSKLSNEQDQILQGLIMEKDNVQREIE 196

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
             +K      LL   ++ L       E +  S+ +  +++    K  LE   N  +    
Sbjct: 197 SIDKQKKRGKLLEEQKQLLDDK----EWSLDSKKNGIEKQIEQRKKGLENERNKVDIIRK 252

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            +   +  D  N    N +  +++ +E   +       ++  L+   E   I +   G +
Sbjct: 253 GKQ-EQKRDVLNQYKENAITSVNQRIESLDQEIFVNKQEIDGLQSQNEMTIIKAKKDGIV 311

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            +     + +  +  + ++ I+P      +R  ++ + I+ +KKG    +++  +   + 
Sbjct: 312 QFPSIIQTGDLIESGEEIVSIIPKEDEKRVRILLSAQDIKEIKKGDK--IQYS-FKLKKT 368

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            K    +  +        ++       E  +   +L       EL  G            
Sbjct: 369 DKQIGKVTYLSAHPILDKDSKAYVYELEGTIDTKELY------ELHTGMVGRASIVIGEE 422

Query: 421 TLAQEIIH 428
            + + I+ 
Sbjct: 423 PIWKFILR 430


>gi|17228994|ref|NP_485542.1| hypothetical protein alr1501 [Nostoc sp. PCC 7120]
 gi|17135322|dbj|BAB77867.1| alr1501 [Nostoc sp. PCC 7120]
          Length = 434

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 69/413 (16%), Positives = 131/413 (31%), Gaps = 13/413 (3%)

Query: 7   KNLKRNHPASLKRMTLL----SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
            +LK   P   +R   +      I  +G   W      + +         E    ++ + 
Sbjct: 28  DDLKIPTPKKPRRWLWILGGTVAIASVGFGVWYGFFRPQPAKMIQFNGRIEGYETDVSTK 87

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +++  V  G  + +G  L+   D E    +      +   +      +  +  L  
Sbjct: 88  GIGRVEEVTVREGDTVKKGQLLVRLSDEEVQSELSAATAQVNAAKQREAYARLQISILA- 146

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             D L  A  + ++   D  GK     + + +   + V +     L     +   R+D +
Sbjct: 147 --DQLADANLNLQQSQGDTQGKVAEGQA-LVSTAKAVVKQEQARVLEARALVEQARVDSD 203

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
             + L      + Q+            A  Q+ L   E       +   +    Q   L 
Sbjct: 204 RYAHLAIEGAETKQRYDVAQTFYNTAKAALQSRLAAVEAAQTAVNIAQGKLTQAQTTTLN 263

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              +  + +  E        +    Q     A    +L  ++      T+ SPI G +  
Sbjct: 264 PRRQQTNVSRFETQAQQARNTIAAAQADVKTAQANQQL--IQSRLNNLTVKSPIDGVVTT 321

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +S         S+PL+++V      Y+R  +   QI  V+ G  A V   +     +K 
Sbjct: 322 -RSVEPGTVVLPSRPLLRVV-DLSQVYLRGFIPGGQIAQVRVGQLANVYLDN-DPKHQKS 378

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           FKA +  ID   S    N+  Q      +    L+        + G PA+   
Sbjct: 379 FKATVTAIDSQASFTPENVYFQSDRVQQVFGVKLSLEQRERLAKPGMPADGEI 431


>gi|282891128|ref|ZP_06299632.1| hypothetical protein pah_c047o022 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498945|gb|EFB41260.1| hypothetical protein pah_c047o022 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 492

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 65/386 (16%), Positives = 131/386 (33%), Gaps = 29/386 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKF--QVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           V ++GE+        I S   G + K    + +G+ +     L+  +     + I+  + 
Sbjct: 55  VETTGELEAA-QSTLIASAVRGDLGKIIYLIADGTSVPANKLLVKLDATPFEETIEDLEQ 113

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +K     I   K  L +  +  +  +K     E+     + K       +    +  + 
Sbjct: 114 QVKEQESKILGLKHKLAWDISAAEHDQKMATLEEDTAHLEIKKIIEGDGPLEKARLQGLV 173

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           +   +K   M+    +   LE +         +  +     K L E+    +N   Q E 
Sbjct: 174 QKAAIKYEEMQGYANDLESLEQQ------GFLNPSEKRQAEKKLNEEKEAYENARMQYES 227

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V      L   I + +  L+      +EA    A  ++     L Q ++        L 
Sbjct: 228 YVNHV---LPMQIMKAEAALKRARSTAEEAARSTAYNIQTTQFTLAQAEQQLTHLHESLE 284

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYIRAK 333
              K  +   ILSP  G +V+ + F      +         +QP+M + P      ++ +
Sbjct: 285 NARKELKHTEILSPYEGMVVHREDFRQGQRRKPRVGDNVLKNQPIMDL-PDLNSMLVKTR 343

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +    +  V  G  AT+    Y ++    F   +  I  +       +  ++Y++V +  
Sbjct: 344 IREIDLHKVSIGKQATISIDSYPNL---FFSGKVHAIGVLALTDITKMGDEKYFDVTI-- 398

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN 419
              A   N+  LR G  A V   +  
Sbjct: 399 ---ALDKNDSRLRPGMTAHVTIHSDQ 421


>gi|254431573|ref|ZP_05045276.1| secretion protein HlyD [Cyanobium sp. PCC 7001]
 gi|197626026|gb|EDY38585.1| secretion protein HlyD [Cyanobium sp. PCC 7001]
          Length = 420

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/424 (11%), Positives = 120/424 (28%), Gaps = 93/424 (21%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++    L + G    +    L P  + V   G +        + +P  G +++  +    
Sbjct: 58  VRLAGGLLVGGFAAAVGLMALWPYRVIVRGPGTVRPSGGTSLVHAPREGRVRRINIRTNQ 117

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + QG  L   +       ++ ++  +  +R  ++++                       
Sbjct: 118 PVQQGEVLAVLDP----ADLEARQQKLSQVRAALESQ----------------------- 150

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +     + +    +        ++L   RS +     L    +  +  L    
Sbjct: 151 ----LQTQRQEDRAALQAAELEVGRAEATLRLA--RSEHQRYSQLVESGATSQEQLEEKA 204

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +L++ ++ + K   ++ ++ QQ      +   L++ + E +                  
Sbjct: 205 ANLSIARSGYAK---ARQEVEQQRFRGESAQARLQQQLAEARAEQAQ------------- 248

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                     L     +  + +P++G +      +        Q
Sbjct: 249 --------------------------LSLDLGRTLVRAPVSGVVFSVALRNPQQVVAAGQ 282

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-- 374
            L +I PH     ++ +V  + I  V+ G  A +R            +A +  + P    
Sbjct: 283 ELARIAPHDAEMQVKVRVASEDIARVEPGQRADLRLVGCPYPDFGTLRARVVSVAPDALP 342

Query: 375 -------------SQQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAK 418
                             +L     +EV L+         S  +  LR G       T +
Sbjct: 343 AAGAGAPGSASAEPDGLTSLAGPAGFEVTLRPDARELVTPSGRSCSLRQGMDLTADITTR 402

Query: 419 NTTL 422
             T+
Sbjct: 403 QETV 406


>gi|183219627|ref|YP_001837623.1| putative signal peptide [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189909766|ref|YP_001961321.1| efflux pump [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167774442|gb|ABZ92743.1| Efflux pump [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167778049|gb|ABZ96347.1| Conserved hypothetical protein; putative signal peptide [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 449

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 59/381 (15%), Positives = 127/381 (33%), Gaps = 48/381 (12%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFS 64
            L +    +     +L+II  + ++    + P + +    G ++     D    I+SP S
Sbjct: 19  RLVQTALPAQSLAYILTIIFFLSVLILLYV-PWQQTTMGFGRVVAYAPLDRQQVIESPIS 77

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K+ V  G+++ +G P++   D +    I+  +     L   ++  +S  D + ++ 
Sbjct: 78  GRVVKWHVHEGTRVKKGDPIIDISDNDPN-FINRIREEKNALLQRLEAARSREDNIRSRI 136

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L                              SS+  ++    +R           E  
Sbjct: 137 LSLR-----------------------------SSMGSAVNAADSRRMMAKDRVRASEQA 167

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM---L 241
               +A L +   +L   K L+EK   S+  L   E     +   L              
Sbjct: 168 VDAAKAALKTANLNLDRQKQLWEKGLTSKRTLELAELDHTNAETGLDRAKAAYDAAVKEE 227

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT---ILSPIAG 298
           R +N    +   +    + +    L   Q   A  +  L  LE    ++    I +P  G
Sbjct: 228 RALNSDTGKVQQDAEASINDAKASLASAQSEVARVLEDLPKLEARLSRQENQEIFAPRDG 287

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY--- 355
            I+       +   ++   +  +VP ++   +   ++   I  V +G    ++F  Y   
Sbjct: 288 IIMRILVNPDTQQVKEGDGVAILVPDAEDKAVELFISGNDIPLVGEGRKVRLQFQGYPVL 347

Query: 356 -----ADIREKKFKAIIEKID 371
                 +     F  +++ +D
Sbjct: 348 QISGWPETAVGTFGGVVKLVD 368


>gi|238783773|ref|ZP_04627792.1| hypothetical protein yberc0001_24500 [Yersinia bercovieri ATCC
           43970]
 gi|238715324|gb|EEQ07317.1| hypothetical protein yberc0001_24500 [Yersinia bercovieri ATCC
           43970]
          Length = 405

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 61/436 (13%), Positives = 133/436 (30%), Gaps = 58/436 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
                 +++++ I+ L+T+ ++         +G ++++  V  I +   G+I +   E G
Sbjct: 2   GASIWAMIALVFIVSLVTFMVVGTYTQRARLTGTVVHQPAVARITATHDGVIVRSFAEEG 61

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  +        T+           L+    T +  +   +   D          
Sbjct: 62  KAVRAGEVIFIVNRETQTEYGATSHEMSAALKSQKVTIEREITLKSAAADT--------- 112

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                       L+  L    +      DL  KS+   + L + 
Sbjct: 113 ------------------------EQNFLRQLLANKETEQQKMDDLIAKSAQQTSWLLAK 148

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            +     K L  +    + +   +    Y ++++L+      +     +           
Sbjct: 149 AEHF---KKLVRQGIALETEHMARLSEYYSASVQLKT----LRREKVKLQAEVVSIQARL 201

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A    E++  LE   R  A     L   E+ RE   I +PI G +      +  N  + +
Sbjct: 202 AAIHSELAATLEGLHRQTAQLDQDLVSTEERRE-LYITAPIDGVLTGITGLT-GNNIRAT 259

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
           Q L  +VP S    +        I  +++G T  +RF  Y      ++   +  I     
Sbjct: 260 QELASVVPTSGRAEVEIFAATDAIGELREGQTVRLRFDAYPYQWFGQYDGTVTSISTTAI 319

Query: 375 -------------SQQDNNLQTQEYYEVILKITDLA--FSDNNIELRNGFPAEVLFTAKN 419
                         Q  ++    +Y+++ +         +     L+ G   E     + 
Sbjct: 320 SSAASERALAANGVQTHHSPSPLKYFQIRISPKSDGVLLAGETYPLQPGIGVETDIFIRK 379

Query: 420 TTLAQEIIHPITDNWP 435
             L Q ++ P+     
Sbjct: 380 RPLYQWLLSPLKSTLS 395


>gi|117653|sp|P22519|CVAA_ECOLX RecName: Full=Colicin V secretion protein CvaA
 gi|41175|emb|CAA40743.1| cvaA protein [Escherichia coli]
 gi|44982386|gb|AAS50164.1| CvaA [Escherichia coli]
 gi|301130418|gb|ADK62219.1| colicin V secretion protein CvaA [Salmonella enterica subsp.
           enterica serovar Kentucky]
 gi|301130547|gb|ADK62347.1| colicin V secretion protein CvaA [Salmonella enterica subsp.
           enterica serovar Kentucky]
 gi|315285031|gb|EFU44476.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 110-3]
 gi|315297139|gb|EFU56419.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 16-3]
          Length = 413

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 63/436 (14%), Positives = 141/436 (32%), Gaps = 56/436 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + L SI+ I   + + I+      V+ SGE+      V I S   G + +  V  G
Sbjct: 14  PLWLIMLGSIVFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQGFVVRQFVHEG 73

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G P+   +  ++T    +     +++   +            + D +    E  +
Sbjct: 74  QLIKKGDPVYLIDISKSTRNGIVTDNHRRDIENQLV-----------RVDNIISRLEESK 122

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  LD L K     +  F      + R+                            +   
Sbjct: 123 KITLDTLEKQRLQYTDAFRRSSDIIQRA-------------------------EEGIKIM 157

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   +    K  ++++ L  Q  + Y+    L     + +     I  L  +   + 
Sbjct: 158 KNNMENYRYYQSKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQA 217

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++   I +   Q       E+ K  +      +  I +   G +      +        
Sbjct: 218 ADFDNRIYQMELQRL-----ELQKELVNTDVEGEIIIRALSDGKVDSLSV-TVGQMVNTG 271

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI- 373
             L++++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I    
Sbjct: 272 DSLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPSEKFGQFSATVKTISRTP 331

Query: 374 ----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                      + Q+    +  +Y+VI           +  + L NG  AE     +   
Sbjct: 332 ASTQEMLTYKGAPQNTPGASVPWYKVIATPEKQIIRYDEKYLPLENGMKAESTLFLEKRR 391

Query: 422 LAQEIIHPITDNWPKI 437
           + Q ++ P  D     
Sbjct: 392 IYQWMLSPFYDMKHSA 407


>gi|229198776|ref|ZP_04325472.1| hypothetical protein bcere0001_42980 [Bacillus cereus m1293]
 gi|228584709|gb|EEK42831.1| hypothetical protein bcere0001_42980 [Bacillus cereus m1293]
          Length = 424

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 54/431 (12%), Positives = 163/431 (37%), Gaps = 28/431 (6%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+R  P  +  +  L  + +IG + W+ +   ++    +  I  + ++   K+  +GI+ 
Sbjct: 4   LERKPPRFIAVLLSLLFLSLIGFMIWAYVGKFDVVSKGTAIIQGKTDISVSKTEIAGIVD 63

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             +V++G ++ +G  L+  ++ E T+    ++  +  +  +++ ++  L+ L     V +
Sbjct: 64  NVKVKSGDEVKKGDILIQLKNQELTN----RQNQVNQIVKYLEEKRGMLEQLKKSIQVHQ 119

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL------KMKLTRMRSIYLNRLDLE 182
            +F +  +  +    K +    +       +    +        +   ++ + + + +++
Sbjct: 120 FSFSNGVDTKIKEEYKTYEQGYQSLQNEKENEIEVIENSKLSNEQDQILQGLIMEKDNVQ 179

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +   +        K L   K L +     +  L+ Q+  + K   + ++ +  ++N + 
Sbjct: 180 REIESIDKQ-KKRGKLLEEQKQLLDDK---EWSLDSQKNGIEKQIEQRKKGLENERNKVD 235

Query: 243 HINELYDEANLEFANYLKE-----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            I +   E   +  N  KE     +++ +E   +       ++  L+   E   I +   
Sbjct: 236 IIRKGKQEQKRDVLNQYKENAITSVNQRIESLDQEIFVNKQEIDGLQSQNEMTIIKAKKD 295

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G + +     + +  +  + ++ I+P      +R  ++ + I+ +KKG    +++  +  
Sbjct: 296 GIVQFPSIIQTGDLIESGEEIVSIIPKEDEKRVRILLSAQDIKEIKKGDK--IQYS-FKL 352

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +  K    +  +        ++       E  +   +L       EL  G         
Sbjct: 353 KKTDKQIGKVTYLSAHPILDKDSKAYVYELEGTIDTKELY------ELHTGMVGRASIVI 406

Query: 418 KNTTLAQEIIH 428
               + + I+ 
Sbjct: 407 GEEPIWKFILR 417


>gi|126642595|ref|YP_001085579.1| hypothetical protein A1S_2560 [Acinetobacter baumannii ATCC 17978]
          Length = 379

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 62/417 (14%), Positives = 141/417 (33%), Gaps = 58/417 (13%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           II    W             G+++ +  ++++ +  SG I K  V  G  + +G  L T 
Sbjct: 2   IIAFAIWGSYTKRSTV---QGQLIPQSGLIQVYTTQSGTILKKNVHEGQTVKKGDILFTI 58

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                 +   +     K  +    + ++ +  +                         H 
Sbjct: 59  STASYGEQGSIADALAKQTQLKEQSIRNEITRMRF----------------------IHQ 96

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              +  N  I  +  +L              + +EN  +  R  ++  +K+     N+  
Sbjct: 97  DEKRTINNQIGLLNGTL--------------VKVENLIANQRERVNLAKKNQQRYGNILH 142

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +NA+S  +   ++        +      E+ ++ + + E      +  +      +  +E
Sbjct: 143 ENAISHEEFEARKIDYLDQLAQYESLQREKVSLEKQLTEQ----QISLSGLENRQNNQIE 198

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q +R  +    +L I  ++R+   I +  +G I    +     +   S+PL+ ++P +  
Sbjct: 199 QLERLLSSNTQEL-IEMQSRQHIAIQANSSGVIGTINA-EVGQFVDLSKPLLTVLPENTA 256

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQ-------- 377
              +  V  + I  VK+G    +R+  Y   +    KA +  +    + SQ         
Sbjct: 257 LIAQLYVPSRAIGFVKEGDQVLLRYQAYPYQKFGHAKAQVLSVAKTALASQDLQTIGIIS 316

Query: 378 -DNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               L  +  Y V  K+         N++ L+ G   E     +   L + ++ P+ 
Sbjct: 317 PQEQLNNEPVYLVRAKLDKQMVKAYGNDMPLQVGMTLEGDIMHEQRKLYEWVLEPLF 373


>gi|124007518|ref|ZP_01692223.1| RND efflux membrane fusion protein [Microscilla marina ATCC 23134]
 gi|123987001|gb|EAY26757.1| RND efflux membrane fusion protein [Microscilla marina ATCC 23134]
          Length = 460

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 55/377 (14%), Positives = 135/377 (35%), Gaps = 34/377 (9%)

Query: 44  VSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +S++G++      D    ++S  +G IK+++++ G  + +G  L    ++++ D  D + 
Sbjct: 56  ISATGKVTALRPSDRPQVVQSTIAGRIKEWRIQEGQSVTKGDTLAIISEVKS-DYFDPQL 114

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES-REEQLLDFLGKYHSTCSKVFNYGISS 159
             +K L   +  ++  ++    K   L++   + ++ Q        +            S
Sbjct: 115 --LKRLEEQVTAKREGMEANQGKVRALDQQISALQDAQKFSLEKARNKYEQARLKVISDS 172

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                +     +      R D   ++  L +     ++ L  ++N + K    QN L   
Sbjct: 173 ANLQAEQVQYGIAKSQFGRYDSLYRNDGLISKTDWEKRQLK-LQNTYAKVVALQNKLLIS 231

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +  +  + +E    I +    +       +      AN   E+S+             +K
Sbjct: 232 KNKLINARIEFNSLIADYTGKIFKSQSEKNSTQAYVANSRGELSK-----------LRNK 280

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
              +E   +Q  +L+P  G +V           + ++ +  ++P +    +   V  + +
Sbjct: 281 YANIEIRNQQYYVLAPQNGFVVKALKSGVGEMIKSNEAIATVMPANPSIAVELMVPARDV 340

Query: 340 QHVKKGYTATVRF--------PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             ++KG    + F          +  +    F   ++ ID IIS+          Y +++
Sbjct: 341 PLIEKGRHVRLEFDGWPALQVSGWPSVSVGTFGGQVKVIDYIISKGGK-------YRLLV 393

Query: 392 KITDLAFSDNNIELRNG 408
                   +   +LR G
Sbjct: 394 VPDPEQDGNWPKQLRAG 410


>gi|301311724|ref|ZP_07217649.1| putative hemolysin secretion transport system membrane protein
           [Bacteroides sp. 20_3]
 gi|300830284|gb|EFK60929.1| putative hemolysin secretion transport system membrane protein
           [Bacteroides sp. 20_3]
          Length = 431

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 138/381 (36%), Gaps = 30/381 (7%)

Query: 60  KSPFS-------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + P +       G I++  V +   + +G  L   E+   TD      + +  +     +
Sbjct: 63  QHPATAVVTRAAGKIQELLVRDNRPVREGDWLAVIENHADTDDA----IYLDKVLERSGS 118

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           +  +LD   ++Y   E +    +      L   H+  +            S++ ++   +
Sbjct: 119 DVDSLDKALSRYK--ELSLGDMQAAYSGLLSALHACINYREIDYYPQKMASIRKQIALYK 176

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           + Y    + E +   L    +  ++       L+ ++ +S  +       + +S   L  
Sbjct: 177 AYYN---ETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEG 233

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                +N+   I E  +++ L+      E    L Q  +T  +++  L  + + R +  +
Sbjct: 234 AAASAENLRIQIGEQ-EQSLLDLTLERSEKEFTLRQELQTAREQL--LNSMNEWRLRYCL 290

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVR 351
           ++P+ G + + + ++ + Y    +    +VP  +     + ++   +   V++G  A VR
Sbjct: 291 IAPVGGVVTFTKYWNENQYIPSGEVAFTVVPQGESRLVGKVRIPIARSGKVRRGQRAIVR 350

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL--RNGF 409
           F ++ D        ++  I  + + +        YY   +   +   ++  I+L      
Sbjct: 351 FSNFPDQEFGVVNGVVSNISLVPTDE--------YYTADIDFPEGLRTNYGIDLPVSPET 402

Query: 410 PAEVLFTAKNTTLAQEIIHPI 430
            A      +   L +    PI
Sbjct: 403 QASAEIVTEELRLIERFFLPI 423


>gi|284035714|ref|YP_003385644.1| hypothetical protein Slin_0782 [Spirosoma linguale DSM 74]
 gi|283815007|gb|ADB36845.1| hypothetical protein Slin_0782 [Spirosoma linguale DSM 74]
          Length = 431

 Score =  110 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 50/385 (12%), Positives = 128/385 (33%), Gaps = 19/385 (4%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V +S ++ + +    + +   G + +  V++G  +  G  +   E     +  D+ ++S 
Sbjct: 55  VHASFKLTSTNAPKAVLTHTDGKLVRLLVQDGQLVGAGDQVAYLEST--ANHADIVRLSQ 112

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  +      +  L+ LN             +     F   +    + + N   S   + 
Sbjct: 113 ELAKAWGLASRGHLEALNQLTLSNYSQLGELQNAYQTFEQAHIQLRAYLANGFYSQKKKL 172

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L+ ++  +  +  N   L  +  +    ++  Q+D  +   L     ++  +L ++E   
Sbjct: 173 LQQEIVDLTLLADN---LRTQHQIQARDMALAQQDYDIQAQLARDKVIAPLELTREESKN 229

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
               L  ++      + L        E          E+ + + + +  F   ++ L   
Sbjct: 230 NARKLPFQQTASALISNLTAQRAKQKEI--------LELDKQVAEERDKFLQALNTLQSA 281

Query: 284 EKTREQK-TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
               + K  + +P++G + +      +     +Q L  + P S   Y   ++       V
Sbjct: 282 ADAWKHKYIVTAPVSGRLSFQGMLQENQSVSLNQELFYVSPLSTHYYGELRIPQHNSGKV 341

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             G +  ++F  Y        +  I KI  +  +    L       V L           
Sbjct: 342 VVGQSVLIKFSGYPYQEFGAVRGRITKIADVSLKDSVFLA-----RVALPTRLQTTYGKQ 396

Query: 403 IELRNGFPAEVLFTAKNTTLAQEII 427
           +  + G  A      +++ L +++ 
Sbjct: 397 LAYKTGMSASAEIITEDSRLLEKLF 421


>gi|163786259|ref|ZP_02180707.1| putative HlyD-family transporter [Flavobacteriales bacterium ALC-1]
 gi|159878119|gb|EDP72175.1| putative HlyD-family transporter [Flavobacteriales bacterium ALC-1]
          Length = 429

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 60/423 (14%), Positives = 136/423 (32%), Gaps = 25/423 (5%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               M +L +I ++  I+W   +     V+S   I  +    +  +  +G +    V + 
Sbjct: 27  RYGNMFVLGLIVMLLFISW--FIKYPDIVTSEAIITTDIPPQKEYTKVTGKLDTILVSDN 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +  PL   E+         K   +  L+  +DT K          + L   F    
Sbjct: 85  EVVSKDKPLAIVENTA-------KFADVYYLKSILDTIKVNNKVFYFPIESLPILFLGDI 137

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E   D+    ++      N  +                +Y     L+++ S  ++ L   
Sbjct: 138 ES--DYALFENNYLQYQLNKELKPFSNEAIANQISKSELYSRLRTLQSQKSSNKSELELQ 195

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-LE 254
           + +    K LF K  +S++D   ++     + L+ + N       +  I E    AN   
Sbjct: 196 KIEFERYKKLFNKGVISKHDYESRQ----VTYLQAQRNYANIDASISQIREAISNANKTS 251

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
               +     ++   ++           ++    Q  + S I G +++   ++ +    +
Sbjct: 252 RGTEINRTKEEINLLKKVIQSFNQLKHAIKNWEIQYALTSKIDGQVIFLNLWTKNQTVNK 311

Query: 315 SQPLMKIVP-HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              +  I+P  +     + K   +    +K G T  ++  ++ D      K  I+ I   
Sbjct: 312 GDLIFTIIPKENSTFIAKLKTPAQNSGKLKIGQTVNIKLENFPDTEFGTLKGNIKSISLF 371

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ---EIIHPI 430
                 +     +  V L    +      I+ +           ++  L +     +  I
Sbjct: 372 -----PDENGFYFTTVTLPSKLITSYKKEIDFKYEMRGSAEIITEDLRLIERFFYQLKNI 426

Query: 431 TDN 433
            DN
Sbjct: 427 LDN 429


>gi|91217010|ref|ZP_01253973.1| hypothetical protein P700755_11135 [Psychroflexus torquis ATCC
           700755]
 gi|91184881|gb|EAS71261.1| hypothetical protein P700755_11135 [Psychroflexus torquis ATCC
           700755]
          Length = 455

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 64/444 (14%), Positives = 146/444 (32%), Gaps = 64/444 (14%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSG---EILNEDNVV 57
           + H+       N    L    ++SI GI+ L+   + LP   +V  +G    +       
Sbjct: 15  LSHYKSMLFTFNKDRFLTFNKIMSIFGIVFLVV--LFLPWTQNVQGNGFVTTLEPNQRPQ 72

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I+S  SG ++++ V  G  + +G  +L   ++ T    D     +      I  +  +L
Sbjct: 73  SIESAISGRVEEWYVSEGQIVNKGDTILHISEV-TDKFFDPNL--LMRTESQITAKNFSL 129

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +   +K + L    E+ +E+                      + +SL         +  +
Sbjct: 130 ESYTSKVNALNFQIEALKEE------------------RKLKLEQSLNTLEQARLQVQTD 171

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            +DLE     ++  LS   +     + L  +   +  D+  ++  +  S  ++    ++ 
Sbjct: 172 SIDLEA----VKIQLSIAGRQFERTETLENEGLKAITDVESKKLQLQNSQAKVISQKNKL 227

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA---DEMSKLTILEKTREQKTIL- 293
            +          E +   ANY ++IS+         +   D  +++T L+       +  
Sbjct: 228 LSSKNQEINSKIEISSIKANYQEKISKAESDKFTALSGQYDTEAQMTKLKNEFTNYKVRS 287

Query: 294 ------SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
                 +P  G I                 ++ I+P +    +   V P  +  +  G  
Sbjct: 288 GMLFITAPQDGFINRAIQKGIGETFSAGTKIISIMPINIEMAVETFVRPIDLPLLHPGEN 347

Query: 348 ATVR--------FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +         F  + ++    +   +  ++  IS           + V++K       
Sbjct: 348 VRIIFDGWPAIFFSGWPNLSYGTYGGEVVAVERTISDNGK-------FRVLIKPNPDEQE 400

Query: 400 DNNIELRNGFPAEVLFTAKNTTLA 423
              + +R G        +   T+A
Sbjct: 401 WPEV-IRAG--------SGARTIA 415


>gi|695621|emb|CAA88431.1| SppE [Lactobacillus sakei]
          Length = 458

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 66/447 (14%), Positives = 159/447 (35%), Gaps = 39/447 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           + +  + ++L  M +  ++ ++ +   S     EI++   G++     +  +++  + ++
Sbjct: 13  SARFKNFSTLLIMPIAVLLCLVCIF--SFFGKREITIEGQGDLTTNKQIPILQASTNSVL 70

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           K+  ++ G  + +G  LL +++ +  +   L +    NL   I + ++    + +  D  
Sbjct: 71  KQNYLKEGKFVKKGQTLLVYQNTKNQNQKRLLEKQQDNLSYQITSLETLKASIRSNQDQF 130

Query: 128 EKAFESREEQL----LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           E   +     L    LD    Y      V +   +S  +   +     ++I  ++ +L+ 
Sbjct: 131 ENNDQFGYRDLLRGYLDQRQVYLIENQMVTDKAATSTTKQQTLTAIMDKTIQRDQTNLDA 190

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-----------LRE 232
             +L +++ ++     T   N   +N  ++      +        +           L+ 
Sbjct: 191 YQALYQSIKTNKVYSSTGKYNYLYENYQTKVKAMSDKNEQSGLKADILATTQQQIDSLQG 250

Query: 233 NIHEQKNMLRHINELYD----------EANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           +I   +N    I E  D          +  L  A   +  +  L + +++  +  + L  
Sbjct: 251 SIANAENQKVSIKEFDDSRFNTNTNNEKLALLEAQQTQSANEQLVKAKQSLVEIQTTLKQ 310

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQI 339
           +    ++  + +P  G +  +  +    Y      + +I P     K   I A +    I
Sbjct: 311 ITSDSKEYVVKAPKDGVLHVDDHYQGIKYTSAGTSMARIYPVLADQKRLKIEALIPVDDI 370

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             VK G    ++          +   I  KI+ I        Q   YY +   I     S
Sbjct: 371 SSVKIGQRLRLKIT----RNVPRPIIIEGKINQISVSPTVINQG-SYYTI---IGLATIS 422

Query: 400 DNNIELRN-GFPAEVLFTAKNTTLAQE 425
           +NN +L + G   ++      TT    
Sbjct: 423 NNNRKLLHYGMTGKIAIITGKTTFFNY 449


>gi|157418207|ref|YP_001481279.1| CvaA [Escherichia coli APEC O1]
 gi|88770257|gb|ABD51694.1| CvaA [Escherichia coli APEC O1]
          Length = 413

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 63/436 (14%), Positives = 141/436 (32%), Gaps = 56/436 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + L SI+ I   + + I+      V+ SGE+      V I S   G + +  V  G
Sbjct: 14  PLWLIMLGSIMFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQGFVVRQFVHEG 73

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G P+   +  ++T    +     +++   +            + D +    E  +
Sbjct: 74  QLIKKGDPVYLIDISKSTRNGIVTDNHRRDIENQLV-----------RVDNIISRLEESK 122

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  LD L K     +  F      + R+                            +   
Sbjct: 123 KITLDTLEKQRLQYTDAFRRSSDIIQRA-------------------------EEGIKIM 157

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   +    K  ++++ L  Q  + Y+    L     + +     I  L  +   + 
Sbjct: 158 KNNMENYRYYQSKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQA 217

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++   I +   Q       E+ K  +      +  I +   G +      +        
Sbjct: 218 ADFDNRIYQMELQRL-----ELQKELVNTDVEGEIIIRALSDGKVDSLSV-TVGQMVNTG 271

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI- 373
             L++++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I    
Sbjct: 272 DSLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPSEKFGQFSATVKTISRTP 331

Query: 374 ----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                      + Q+    +  +Y+VI           +  + L NG  AE     +   
Sbjct: 332 ASTQEMLTYKGAPQNTPGASVPWYKVIATPEKQIIRYDEKYLPLENGMKAESTLFLEKRR 391

Query: 422 LAQEIIHPITDNWPKI 437
           + Q ++ P  D     
Sbjct: 392 IYQWMLSPFYDMKHSA 407


>gi|189347151|ref|YP_001943680.1| secretion protein HlyD family protein [Chlorobium limicola DSM 245]
 gi|189341298|gb|ACD90701.1| secretion protein HlyD family protein [Chlorobium limicola DSM 245]
          Length = 330

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 74/208 (35%), Gaps = 8/208 (3%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R+    +  ML  +  L   A +     +++   D+ + Q   AD   ++        Q 
Sbjct: 117 RQQYATESAMLSKLRSLLQSAAVS-EFEVEQKKLDVLKLQAQIADLSEQINKQSYMANQA 175

Query: 291 T----ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           T    I +P+ GT+   Q         Q Q ++K+VP       RA ++ + I  V +  
Sbjct: 176 TGYEGITAPVDGTVFDLQV-KQGTVVSQGQIILKVVP-DDQLTARAFISNQDIGFVYENL 233

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNNIEL 405
              VR   +        K  +  +   +   D+ ++   +  +V+L    L  +   I L
Sbjct: 234 PVDVRLDAFPYAEFGDIKGKVLWVGSDVLPPDDIIKYYHFPIKVLLDQQHLMANGKKIYL 293

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           ++G    +    +  T+        T  
Sbjct: 294 QSGMSVTLNIKVRKRTVMSIFTDLFTQQ 321



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 63/153 (41%), Gaps = 12/153 (7%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  + ++   G + W+ +  I++S+ ++G++     V  +++   G + +  VE+G +
Sbjct: 25  RIILWVLVLAFFGFLLWASIAKIDVSIPATGKLEPTGEVKSVQAAIEGEVSRLYVEDGRR 84

Query: 78  ILQGTPLLTFED---IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           + +G  LL       +     +   ++++ N R    TE + L  L +       +    
Sbjct: 85  VKKGEVLLDLVPVLSVGEESKLKSLQIALSNARQQYATESAMLSKLRSLLQSAAVSEFEV 144

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           E++ LD L              I+ +   +  +
Sbjct: 145 EQKKLDVLK---------LQAQIADLSEQINKQ 168


>gi|194446909|ref|YP_002039019.1| microcin H47 secretion protein MchE [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|218534584|ref|YP_002401114.1| Colicin V secretion protein CvaA [Escherichia coli S88]
 gi|194358661|gb|ACF57104.1| microcin H47 secretion protein MchE [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|218349788|emb|CAQ87181.1| Colicin V secretion protein CvaA [Escherichia coli S88]
 gi|323948919|gb|EGB44815.1| HlyD family protein secretion protein [Escherichia coli H252]
          Length = 424

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 63/436 (14%), Positives = 141/436 (32%), Gaps = 56/436 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + L SI+ I   + + I+      V+ SGE+      V I S   G + +  V  G
Sbjct: 25  PLWLIMLGSIVFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQGFVVRQFVHEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G P+   +  ++T    +     +++   +            + D +    E  +
Sbjct: 85  QLIKKGDPVYLIDISKSTRNGIVTDNHRRDIENQLV-----------RVDNIISRLEESK 133

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  LD L K     +  F      + R+                            +   
Sbjct: 134 KITLDTLEKQRLQYTDAFRRSSDIIQRA-------------------------EEGIKIM 168

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   +    K  ++++ L  Q  + Y+    L     + +     I  L  +   + 
Sbjct: 169 KNNMENYRYYQSKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQA 228

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++   I +   Q       E+ K  +      +  I +   G +      +        
Sbjct: 229 ADFDNRIYQMELQRL-----ELQKELVNTDVEGEIIIRALSDGKVDSLSV-TVGQMVNTG 282

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI- 373
             L++++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I    
Sbjct: 283 DSLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPSEKFGQFSATVKTISRTP 342

Query: 374 ----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                      + Q+    +  +Y+VI           +  + L NG  AE     +   
Sbjct: 343 ASTQEMLTYKGAPQNTPGASVPWYKVIATPEKQIIRYDEKYLPLENGMKAESTLFLEKRR 402

Query: 422 LAQEIIHPITDNWPKI 437
           + Q ++ P  D     
Sbjct: 403 IYQWMLSPFYDMKHSA 418


>gi|295134787|ref|YP_003585463.1| outer membrane efflux protein [Zunongwangia profunda SM-A87]
 gi|294982802|gb|ADF53267.1| outer membrane efflux protein [Zunongwangia profunda SM-A87]
          Length = 460

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 50/371 (13%), Positives = 119/371 (32%), Gaps = 50/371 (13%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
            +  +     ++SP  G I+K+ V+ G  + +G  +L   +++      L          
Sbjct: 64  TLKPDQRPQTLQSPIPGQIQKWYVQEGDYVEKGDTILHIAEVKNEYFDPLL--------- 114

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            ++     L   +N +    +  ++ + QL     +      +  N    +  +     +
Sbjct: 115 -VERTGDQLASKSNSFASYGQKIDALQRQLAAIQRERELKLEQTRNKRKQAELKINSDSI 173

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           +                   R  LS   +  T    L+E+   S+ DL  ++    +S  
Sbjct: 174 S---------------LEAARVNLSIADRQYTRTTELYEEGLKSRLDLETKQSKFQESQA 218

Query: 229 ---ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
              +L   +   +N L +     +     + + + +I  ++     +  D  ++++ LE 
Sbjct: 219 KVIDLENKLLSSRNELLNAIMEVNRIEANYIDKINKIEGEISTANSSRFDAQAQVSKLEN 278

Query: 286 TREQKTIL-------SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +     I        +P  G I            ++ + L+ I+P      +   V P  
Sbjct: 279 SLSNYQIRKNLLYIRAPQNGYINRALIKGLGETFKEGEKLVTIMPSDIDIAVETYVKPID 338

Query: 339 IQHVKKGYTATVR--------FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           +  +  G    V+        F  + +     + A +  I+  IS           Y ++
Sbjct: 339 LPLISIGDHVRVQFDGWPAIVFSGWPNASYGTYGAKVVAIENFISDNGK-------YRIL 391

Query: 391 LKITDLAFSDN 401
           L         +
Sbjct: 392 LAPDLKEREKH 402


>gi|75909070|ref|YP_323366.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75702795|gb|ABA22471.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 517

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 58/436 (13%), Positives = 144/436 (33%), Gaps = 67/436 (15%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEIS----------------------VSSSGEILN 52
           A +  ++ L ++GI+G I ++I   + +                       VS++G +  
Sbjct: 22  AKINWLSWLIVLGIVGGIGYAIYYQLTVVPRQQARSRVLTQAVERQTLPITVSANGTVKP 81

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E +V  +    SGI+K+  V+ G  + QG  L   +D      +   +  +     ++  
Sbjct: 82  ERSV-NLSPKNSGILKQLLVKEGDVVKQGQVLAYMDDSNLRGQLISAQGQLAQAEANLQK 140

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            ++                 +R + +     +     + +      +  + +     R++
Sbjct: 141 VQAG----------------NRPQDIGQSQAQLDEALANLRKLETGNRPQDIAQAQARLK 184

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-QERIVYKSTLELR 231
           S   +    E+     + L +     L ++     +   +Q  +N+ Q+ +  +     +
Sbjct: 185 SAQASLTQAEDDLRRNQQLYNDGAIALQVVNQKRTERDSAQAQVNEAQQALALQQAGSRQ 244

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E+I + +  +R   E    A L+  N  ++I       +         L   +       
Sbjct: 245 EDIEQARATVRQRQEAL--ALLKAGNRREDIDA----ARAQVTSARGSLQNTQAQINDTV 298

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQ--------PLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           + +P  G +   +      +   +             I+  +    + A ++   I  ++
Sbjct: 299 LRAPFDGIVTQ-KYADPGAFVTPTTSGSAVSSATSSSILALASRNEVVANLSESNIAKIR 357

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G   T+    Y       F+  + +I    + + N       ++V + ++D        
Sbjct: 358 LGQKVTITADAYPGRT---FEGKVSQIAAQATVEQNVTS----FQVKVSLSDSQRL---- 406

Query: 404 ELRNGFPAEVLFTAKN 419
            LR+G      F A  
Sbjct: 407 -LRSGMNVSAEFQAGQ 421


>gi|300905670|ref|ZP_07123409.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 84-1]
 gi|301306454|ref|ZP_07212521.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 124-1]
 gi|154736723|gb|ABS84891.1| CvaA [Escherichia coli]
 gi|300402486|gb|EFJ86024.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 84-1]
 gi|300838334|gb|EFK66094.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 124-1]
 gi|315253100|gb|EFU33068.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 85-1]
          Length = 413

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 59/436 (13%), Positives = 136/436 (31%), Gaps = 56/436 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + L SI+ I   + + I+      V+ SGE+      V I S   G + +  V  G
Sbjct: 14  PLWLIMLGSIVFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQGFVVRQFVHEG 73

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G P+   +  ++T    +     +++   +    + +  L     +     E + 
Sbjct: 74  QLIKKGDPVYLIDISKSTRNGIVTDNHRRDIENQLVRVNNIISRLEESKKITLDTLEKQR 133

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q  D   +      +                                        +   
Sbjct: 134 LQYTDAFRRSSDIIQRA------------------------------------EEGIKIM 157

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   +    K  ++++ L  Q  + Y+    L     + +     I  L  +   + 
Sbjct: 158 KNNMENYRYYQSKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQA 217

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++   I +   Q       E+ K  +      +  I +   G +      +        
Sbjct: 218 ADFDNRIYQMELQRL-----ELQKELVNTDVEGEIIIRALSDGKVDSLSV-TVGQMVNTG 271

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI- 373
             L++++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I    
Sbjct: 272 DSLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPSEKFGQFSATVKTISRTP 331

Query: 374 ----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                      + Q+    +  +Y+VI           +  + L NG  AE     +   
Sbjct: 332 ASTQEMLTYKGAPQNTPGASVPWYKVIATPEKQIIRYDEKYLPLENGMKAESTLFLEKRR 391

Query: 422 LAQEIIHPITDNWPKI 437
           + Q ++ P  D     
Sbjct: 392 IYQWMLSPFYDMKHSA 407


>gi|146298924|ref|YP_001193515.1| secretion protein HlyD family protein [Flavobacterium johnsoniae
           UW101]
 gi|146153342|gb|ABQ04196.1| secretion protein HlyD family protein [Flavobacterium johnsoniae
           UW101]
          Length = 379

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 64/417 (15%), Positives = 132/417 (31%), Gaps = 76/417 (18%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + L+ II I+  +    ++ ++IS  S G I  +   V + +  +G I    ++N + + 
Sbjct: 25  IYLIVIIAILTFLILLPIIKVDISSQSRGIIRGKAENVPVSTIVNGRISWIFLKNNAFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  LL             K+     L   +   +   + L NK   L+ +     E L 
Sbjct: 85  KGDTLLKISKENLESD---KRTQDTLLVSVLALLRDISNLLQNKTTHLQTSTA--REDLF 139

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
            F    +   SK+    I+                                         
Sbjct: 140 KFQSGKNELQSKISQAKIN----------------------------------------Y 159

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              K L++K+ +++ D  + E  +  +   ++  I +QK                     
Sbjct: 160 DRNKILYDKDIIAKADFEKLEYELRLTEQAMQSFISQQKAT------------------W 201

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +   RDLE+  +     + K+           + +PI+GTI         ++   SQ + 
Sbjct: 202 ENQKRDLEERLKNLNGTVFKINA---ESNNYVVTAPISGTIESFSGIQKGSFVSASQTIA 258

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I+  +    +   V+P  I  +KK      +   +   +       +  ID  I+ Q +
Sbjct: 259 -IISSTDNLIVENNVSPNDIGLIKKNQKVKFQLDAFNYNQWGLLDGKVIDIDHNITIQGD 317

Query: 380 NLQTQEYYEVILKITDLAFS---DNNIELRNGFPAEV-LFTAKNTTLAQEIIHPITD 432
               Q +++V   +          +   +  G             +L   +   I D
Sbjct: 318 ----QAFFKVRCSLNSKTLQLKSGDKTNVSKGMTLTTRYIIT-KRSLFDLLFDKIDD 369


>gi|194335758|ref|YP_002017552.1| secretion protein HlyD family protein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308235|gb|ACF42935.1| secretion protein HlyD family protein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 329

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 90/271 (33%), Gaps = 5/271 (1%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
             KL     +   +  +E + S LR       K   ++  L    +V +    +  +I  
Sbjct: 53  TGKLEPTGEVKKVQAAIEGEVSALRVDDGQRVKKGEVLLELVPVLSVGEESKLKSLQINL 112

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            +T +           LR +      +  E      ++ +   Q          +  +  
Sbjct: 113 DNTRQQYATESVLLGKLRSLLSTAAVSQFEVEQKKLDVLKLQAQVADLTEQISKQQYMTG 172

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           +    ++I +P++GT+   Q           Q ++K+VP       +A ++ + I  V +
Sbjct: 173 QATGYESITAPVSGTVFDLQV-KKGAIVSSGQVMLKVVP-DDNLTTKAFISNQDIGFVYE 230

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNN 402
           G    V+   +        K  + ++   +    +++    ++ V + +    L  +   
Sbjct: 231 GLPVDVKLDAFPSSEFGDIKGRVLQVGSDVL-APDDIIKYYHFPVKVTLERQFLEVNGRK 289

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           I L++G    +    +  T+        T  
Sbjct: 290 IFLQSGMSVTMNIKVRKRTVMSIFTDLFTQQ 320



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 69/172 (40%), Gaps = 16/172 (9%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  + ++   G I W+ +  I++S+ ++G++     V ++++   G +   +V++G +
Sbjct: 24  RAILWVLVLAFFGFIVWASVAEIDVSIPATGKLEPTGEVKKVQAAIEGEVSALRVDDGQR 83

Query: 78  ILQGTPLLTFED---IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           + +G  LL       +     +   ++++ N R    TE   L  L +            
Sbjct: 84  VKKGEVLLELVPVLSVGEESKLKSLQINLDNTRQQYATESVLLGKLRSLLSTAA------ 137

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                  + ++     K+    + +    L  ++++ + +       E+ ++
Sbjct: 138 -------VSQFEVEQKKLDVLKLQAQVADLTEQISKQQYMTGQATGYESITA 182


>gi|229526607|ref|ZP_04416011.1| membrane-fusion protein [Vibrio cholerae bv. albensis VL426]
 gi|229336765|gb|EEO01783.1| membrane-fusion protein [Vibrio cholerae bv. albensis VL426]
          Length = 405

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 77/417 (18%), Positives = 150/417 (35%), Gaps = 54/417 (12%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
            ++ II LIT+ ++      VS  G +  +   V+I S   G +    VENG+Q+ +G  
Sbjct: 34  VLVAIILLITFGLITDYSKKVSVKGFLEPKKGSVKIFSTKIGKLN-IDVENGAQVSKGEQ 92

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           +    + +T                     K     ++ +   L  A +  +EQL+    
Sbjct: 93  IAHIINDDTN--------------------KDGRSIIDLEIKSLRDASDLAKEQLILAES 132

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL---RALLSSHQKDLT 200
           +  +   +                     S+Y +++D+E+   ++   +  L   +++L 
Sbjct: 133 RLKTFKEQ------------------EKLSMYQHKIDIESSKKIVSKRQEQLRLAKENLA 174

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             + L +K  +S+  L      V  + L L E   +  ++    + L  E  ++     K
Sbjct: 175 RSQILADKKMLSRTVLEDVYGTVISTELALSEAQSKLTSLQTKTDTLKIEWKMQENALRK 234

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           EI       QR      +KL      +E   I+SP +G + Y  +    N     Q L  
Sbjct: 235 EI----NDFQRDVLSAENKLEQAIAQKE-TIIISPSSGVVTYASAQHDENV-NVGQELFY 288

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQ 376
           I  ++             I   K G +  +R+  Y       F   I  ID       + 
Sbjct: 289 ITSNNDELVAVLLAPSTAIGFAKIGDSVNIRYDAYPYREHGIFIGDIISIDKTAQIPNTI 348

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           +     ++  Y++++K+  +  S +   ++LR+G   E         L   +  PI 
Sbjct: 349 RSPIAISEPVYKIVVKVEQIPVSKSGALLKLRSGMKIEASIILDKKPLIFWLFDPIF 405


>gi|291080771|ref|ZP_06535129.2| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 205

 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 70/221 (31%), Gaps = 32/221 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 16  QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G ++     +   +       +       +           +   L  +   L 
Sbjct: 76  QLTVREGDRVQANQIVAQLDPTRLASNVGESAAKYRASLA-------SSARLTAEVSDLP 128

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            AF +      D +                             R     R  L +  + L
Sbjct: 129 LAFPAELNGWPDLIA-------------------------AETRLYKSRRAQLADTEAEL 163

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           R  L+S  K+LT+ + L +  A S  ++ + +R      L+
Sbjct: 164 RDALASVNKELTITQRLEKSGAASHVEVLRLQRTKSVLDLK 204


>gi|169546449|ref|YP_001711900.1| CvaA [Escherichia coli]
 gi|331652525|ref|ZP_08353536.1| colicin V secretion protein CvaA [Escherichia coli M718]
 gi|168831001|gb|ACA34782.1| CvaA [Escherichia coli]
 gi|331049631|gb|EGI21697.1| colicin V secretion protein CvaA [Escherichia coli M718]
          Length = 424

 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 63/436 (14%), Positives = 141/436 (32%), Gaps = 56/436 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + L SI+ I   + + I+      V+ SGE+      V I S   G + +  V  G
Sbjct: 25  PLWLIMLGSIMFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQGFVVRQFVHEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G P+   +  ++T    +     +++   +            + D +    E  +
Sbjct: 85  QLIKKGDPVYLIDISKSTRNGIVTDNHRRDIENQLV-----------RVDNIISRLEESK 133

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  LD L K     +  F      + R+                            +   
Sbjct: 134 KITLDTLEKQRLQYTDAFRRSSDIIQRA-------------------------EEGIKIM 168

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   +    K  ++++ L  Q  + Y+    L     + +     I  L  +   + 
Sbjct: 169 KNNMENYRYYQSKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQA 228

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++   I +   Q       E+ K  +      +  I +   G +      +        
Sbjct: 229 ADFDNRIYQMELQRL-----ELQKELVNTDVEGEIIIRALSDGKVDSLSV-TVGQMVNTG 282

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI- 373
             L++++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I    
Sbjct: 283 DSLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPSEKFGQFSATVKTISRTP 342

Query: 374 ----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                      + Q+    +  +Y+VI           +  + L NG  AE     +   
Sbjct: 343 ASTQEMLTYKGAPQNTPGASVPWYKVIATPEKQIIRYDEKYLPLENGMKAESTLFLEKRR 402

Query: 422 LAQEIIHPITDNWPKI 437
           + Q ++ P  D     
Sbjct: 403 IYQWMLSPFYDMKHSA 418


>gi|167564281|ref|ZP_02357197.1| secretion protein, putative [Burkholderia oklahomensis EO147]
 gi|167571431|ref|ZP_02364305.1| secretion protein, putative [Burkholderia oklahomensis C6786]
          Length = 422

 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 56/430 (13%), Positives = 138/430 (32%), Gaps = 64/430 (14%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A       L +I +    T++    ++      G +  +  +V++ +  +G++ K  V  
Sbjct: 36  AGAAASMALGVILLFTFGTYTRRTTVD------GVLTPDTGLVKVYAQQTGVVLKKNVVE 89

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L T                                      D+   A    
Sbjct: 90  GQHVARGQVLYTVST-----------------------------------DLQSAAAGQT 114

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +  L++   +  ++  +  +   +          +++ S+      ++++ +  R   S 
Sbjct: 115 QAALIEQAQQRKTSLQQELDKTRTLQQDERDTLQSKIASLRAELAGIDDQIAAQRTRTSI 174

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE---A 251
                +    L  ++ +S++   Q++  +     +L   + ++    + + E  ++    
Sbjct: 175 AADAASRYAGLLAQDYISKDQAQQRQADLLDQRSKLNSLMRDRAGAAQALKEALNDLSGL 234

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           +L+  N L +I R +    RT  +  +K         +  I +P  GT            
Sbjct: 235 SLKQQNQLSQIDRSVIDVDRTLIESEAK--------RELVITAPETGTATAV-IAEPGQT 285

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           A  S PL  IVP          V    +  +  G    VR+  Y   +  +++A +  I 
Sbjct: 286 ADTSHPLASIVPTDAHWQAYLFVPSAAVGFIHVGDRVLVRYQAYPYQKFGQYEASVVSIA 345

Query: 372 PIISQQDN---------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNT 420
                               +  YY + + +   + +       L+ G   +     +  
Sbjct: 346 RTALSAAELATSGGPAAQTASGTYYRITVALKSQSVTAYGKAQPLQAGMALQADILQERR 405

Query: 421 TLAQEIIHPI 430
            L + ++ P+
Sbjct: 406 RLYEWVLEPL 415


>gi|312876279|ref|ZP_07736265.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796925|gb|EFR13268.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 548

 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 60/407 (14%), Positives = 134/407 (32%), Gaps = 38/407 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ ++  SG + +      I S  +G ++K  V+NG  + +G  +   ++ +    I+  
Sbjct: 55  LKQTLLVSGTVQSSSTRNVI-SKTNGTLEKVFVKNGQYVKKGDVIAKVDETQAAYKIESL 113

Query: 100 KVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           K  +  L    ++ +  L    L +  +   +   + E  L+    +  +          
Sbjct: 114 KRQLSELELQRESLERQLQNFTLKSPQEGFVQNLATSEGVLVSQGMQMMTIVDDSRMKLS 173

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-- 215
             +      K+ + +   +   DL +K   +   + S          +F+   V  N   
Sbjct: 174 VQLPAWCYEKVKKGQKAEVVVSDLMDKVDGVVQSIGSKIYKNQDGAMVFDAKVVVSNKNG 233

Query: 216 -LNQQERIVYKSTLELRENIHEQKNML--------------RHINELYDEANLEFAN--- 257
            L +  R      L   E +      +                I +++ E   +      
Sbjct: 234 SLAEGMRASVSFLLSNGEKVTSLSEGILEVFSKKSIVSPVSGRIEKVFVENGQKVKTGDL 293

Query: 258 ----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                + +I   ++Q      D  S++   E+  +   +L+PI G I         +   
Sbjct: 294 LLKFSVDDIEMQIKQVDLKIEDIKSQIKAAEEDLKNYKVLAPIDGKIADLNL-QEGDVVA 352

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q +   V   K   + A+V    I  VK G    +R       ++K  +  + +I   
Sbjct: 353 PGQMICS-VYDPKHLVLSAQVEELDILKVKPGQKVNIRLDAVGSTKDKPIEGYVTEIS-- 409

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +      +   + V ++       +NN  ++ G  AE     K+ 
Sbjct: 410 -EKAQPEGSSISKFVVKIE------FENNNSIKIGMHAEAEIILKSK 449


>gi|312792330|ref|YP_004025253.1| efflux transporter, rnd family, mfp subunit [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179470|gb|ADQ39640.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 548

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 59/407 (14%), Positives = 134/407 (32%), Gaps = 38/407 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ ++  SG + +      I S  +G ++K  V+NG  + +G  +   ++ +    I+  
Sbjct: 55  LKQTLLVSGTVQSSSTRNVI-SKTNGTLEKVFVKNGQYVKKGDVIAKVDETQAAYKIESL 113

Query: 100 KVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           K  +  L    ++ +  L    L +  +   +   + E  L+    +  +          
Sbjct: 114 KRQLSELELQRESLERQLQNFTLKSPQEGFVQNLATSEGVLVSQGMQMMTIVDDSRMKLS 173

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-- 215
             +      K+ + +   +   DL +K   +   + S          +F+   V  N   
Sbjct: 174 VQLPAWCYEKVKKGQKAEVVVSDLMDKVDGVVQSIGSKIYKNQDGAMVFDAKVVVSNKNG 233

Query: 216 -LNQQERIVYKSTLELRENIHEQKNML--------------RHINELYDEANLEFAN--- 257
            L +  R      L   E +      +                I +++ E   +      
Sbjct: 234 SLAEGMRASVSFLLSNGEKVTSLSEGILEVFSKKSIVSPVSGRIEKVFVENGQKVKTGDL 293

Query: 258 ----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                + +I   ++Q      D  S++   E+  +   +L+PI G I         +   
Sbjct: 294 LLKFSVDDIEMQIKQVDLKIEDIKSQIKAAEEDLKNYKVLAPIDGKIADLNL-QEGDVVA 352

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q +   V   K   + A+V    I  VK G    ++       ++K  +  + +I   
Sbjct: 353 PGQMICS-VYDPKHLVLSAQVEELDILKVKPGQKVNIKLDAVGSTKDKPIEGYVTEIS-- 409

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +      +   + V ++       +NN  ++ G  AE     K+ 
Sbjct: 410 -EKAQPEGSSISKFVVKIE------FENNNSIKIGMHAEAEIILKSK 449


>gi|58585438|gb|AAW79060.1| sppE [Lactobacillus sakei]
          Length = 458

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 65/447 (14%), Positives = 158/447 (35%), Gaps = 39/447 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           + +  + ++L  M +  ++ ++ +   S     EI++   G++     +  +++  + ++
Sbjct: 13  SARFKNFSTLLIMPIAVLLCLVCIF--SFFGKREITIEGQGDLTTNKQIPILQASTNSVL 70

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           K+  ++ G  + +G  LL +++ +  +   L +    NL   I + ++    + +  D  
Sbjct: 71  KQNYLKEGKFVKKGQTLLVYQNTKNQNQKRLLEKQQDNLSYQITSLETLKASIRSNQDQF 130

Query: 128 EKAFESREEQL----LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           E   +     L    LD    Y      V +   +S  +   +     ++I  ++ +L+ 
Sbjct: 131 ENNDQFGYRDLLRGYLDQRQVYLIENQMVTDKAATSTTKQQTLTAIMDKTIQRDQTNLDA 190

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-----------LRE 232
             +L +++ ++     T   N   +N  ++      +        +           L+ 
Sbjct: 191 YQALYQSIKTNKVYSSTGKYNYLYENYQTKVKAMSDKNEQSGLKADILATTQQQIDSLQG 250

Query: 233 NIHEQKNMLRHINELYD----------EANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           +I   +N    I E  D          +  L  A   +  +  L + +++  +  + L  
Sbjct: 251 SIANAENQKVSIKEFDDSRFNTNTNNEKLALLEAQQTQSANEQLVKAKQSLVEIQTTLKQ 310

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQI 339
           +    ++  + +P  G +  +  +    Y      + +I P     K   I A +    I
Sbjct: 311 ITSDSKEYVVKAPKDGVLHVDDHYQGIKYTSAGTSMARIYPVLADQKRLKIEALIPVDDI 370

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             VK G    ++          +   I  KI+ I        Q   YY +         S
Sbjct: 371 SSVKIGQRLRLKIT----RNVPRPIIIEGKINQISVSPTVINQG-SYYTI---TGLATIS 422

Query: 400 DNNIELRN-GFPAEVLFTAKNTTLAQE 425
           +NN +L + G   ++      TT    
Sbjct: 423 NNNRKLLHYGMTGKIAIITGKTTFFNY 449


>gi|302039239|ref|YP_003799561.1| putative efflux transporter, membrane fusion protein [Candidatus
           Nitrospira defluvii]
 gi|300607303|emb|CBK43636.1| putative Efflux transporter, membrane fusion protein [Candidatus
           Nitrospira defluvii]
          Length = 532

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 136/391 (34%), Gaps = 48/391 (12%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEI---LNEDNVVEIKSP 62
           W+ ++            + ++G   LI     +P   +++ +G++      +   ++++ 
Sbjct: 93  WEAVQIPERLRFSSRLAILLVGFFILIV--AFVPWTQTITVTGQLSAYTPFERPQDVEAQ 150

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G I+K+ V  G ++  G  +L  +D +   +       ++  +  ++  +        
Sbjct: 151 ITGRIRKWHVFEGVRVKTGDVILELDDYDPNFMAPDLLSLLEQRKKALEDTR-------- 202

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                 KA  SR +QL   + +  +            V  ++     R+        +  
Sbjct: 203 ------KAALSRADQLDKRIKEMQNL-----------VKAAVPSAGARVLEAESKVREAR 245

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            K    +  +++ + ++   + L ++  VSQ +L    +    S  +L+          +
Sbjct: 246 QKIEASKIAVATAELNVERHQQLAQQGLVSQRELELTIQSALASKADLQGAQANLSAAEQ 305

Query: 243 HINEL---YDEANLEFANYLKEISR-------DLEQNQRTFADEMSKLTILEKTREQKTI 292
            +  L    ++ + E    L +          +  +     AD   +L+   + R    I
Sbjct: 306 GMKALSFGREQVSAEVLQRLLDAEAARDASIGEAARAADQVADVSLRLSNANQRRVAGRI 365

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           LSPI GT+V      +    +    L++I P S    I           +  G    + F
Sbjct: 366 LSPIDGTVVKMAQAGAGETVRPGDKLVRISPSSTDKAIEMVADGIDAPLLNVGRKVKILF 425

Query: 353 --------PHYADIREKKFKAIIEKIDPIIS 375
                   P + ++    +  +I+ ID +  
Sbjct: 426 YGIPAIPLPAWPELMAGTYNGVIKVIDQVDD 456


>gi|222104811|ref|YP_002539300.1| colicin V secretion protein [Escherichia coli]
 gi|221589240|gb|ACM18237.1| colicin V secretion protein [Escherichia coli]
          Length = 424

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 59/436 (13%), Positives = 136/436 (31%), Gaps = 56/436 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + L SI+ I   + + I+      V+ SGE+      V I S   G + +  V  G
Sbjct: 25  PLWLIMLGSIVFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQGFVVRQFVHEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G P+   +  ++T    +     +++   +    + +  L     +     E + 
Sbjct: 85  QLIKKGDPVYLIDISKSTRNGIVTDNHRRDIENQLVRVNNIISRLEESKKITLDTLEKQR 144

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q  D   +      +                                        +   
Sbjct: 145 LQYTDAFRRSSDIIQRA------------------------------------EEGIKIM 168

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   +    K  ++++ L  Q  + Y+    L     + +     I  L  +   + 
Sbjct: 169 KNNMENYRYYQSKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQA 228

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++   I +   Q       E+ K  +      +  I +   G +      +        
Sbjct: 229 ADFDNRIYQMELQRL-----ELQKELVNTDVEGEIIIRALSDGKVDSLSV-TVGQMVNTG 282

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI- 373
             L++++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I    
Sbjct: 283 DSLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPSEKFGQFSATVKTISRTP 342

Query: 374 ----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                      + Q+    +  +Y+VI           +  + L NG  AE     +   
Sbjct: 343 ASTQEMLTYKGAPQNTPGASVPWYKVIATPEKQIIRYDEKYLPLENGMKAESTLFLEKRR 402

Query: 422 LAQEIIHPITDNWPKI 437
           + Q ++ P  D     
Sbjct: 403 IYQWMLSPFYDMKHSA 418


>gi|329960779|ref|ZP_08299085.1| conserved domain protein [Bacteroides fluxus YIT 12057]
 gi|328532380|gb|EGF59181.1| conserved domain protein [Bacteroides fluxus YIT 12057]
          Length = 440

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 66/436 (15%), Positives = 145/436 (33%), Gaps = 18/436 (4%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEI 59
           + H   + L    P  L R  +     I+ L+   S       +V +S  I  E   V I
Sbjct: 11  LRHEAIQELLGTLPGWLIRWGITLFSCILALLVLGSYFFRYPETVKASITITTEHPSVWI 70

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
            +  SG I    V+N   I +G  +    +    D I+    ++ ++R  I +  +  D 
Sbjct: 71  VAKSSGNIDSIYVKNHDFIKKGDLIAVIHNTAHIDDIEKLNEALDSIRKFIVS-FAIEDI 129

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTC-SKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
              + ++     +    QL+  L  Y     + +    I+S+ + L  +   +R      
Sbjct: 130 YVPQQELKVGELQKDYAQLVKLLNDYLVFVKNNIHEIKIASMQKELAEQEKLVRQAQKQV 189

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK-STLELRENIHEQ 237
                 S + +          +    +  +   S+  +   +  + +     ++ NI   
Sbjct: 190 DLYSQYSIINKKQYQRDSILFSNQAAMAIEKEESEMKVLNGKIQLEQVKQNAIQGNIS-I 248

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             + + I+E   E N++  NY   I    EQ +    +                + +P  
Sbjct: 249 LRLRQSIDEYTAEINMQSENYRTNIRVAYEQLRSYLWNWEQTY----------LLKAPSN 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYA 356
           G + ++  +         +    IVPH+    I + K+       +K+G    ++   Y 
Sbjct: 299 GIVSFSAYWGKGQPIAVGEKSFSIVPHNSGRIIGKCKIPVTGAGKIKRGQRVIIKLNEYP 358

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL-RNG-FPAEVL 414
            +     + ++  I  I  ++ +    + +  V +       S     +   G    E  
Sbjct: 359 YMEFGLLEGVVGDIYLIPMEKQSATGIERFGIVDVAFPKALTSIYRKAIPFPGELTGEAE 418

Query: 415 FTAKNTTLAQEIIHPI 430
                 +L + ++ P 
Sbjct: 419 IAVNELSLLEHLLRPF 434


>gi|217967227|ref|YP_002352733.1| efflux transporter, RND family, MFP subunit [Dictyoglomus turgidum
           DSM 6724]
 gi|217336326|gb|ACK42119.1| efflux transporter, RND family, MFP subunit [Dictyoglomus turgidum
           DSM 6724]
          Length = 432

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 130/378 (34%), Gaps = 77/378 (20%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +VS SG +  E   ++I S  SG +    VE G+++ +G  L+  +  +  +      ++
Sbjct: 49  TVSGSGTLEAE-RSLDITSKVSGTVIYV-VEEGTRVKEGDILVKIDPTDYQNTYQQALIT 106

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            KN     +  +   D                                            
Sbjct: 107 YKNYENSYEQARLNYD-------------------------------------------- 122

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
                 T+ R +  N  D +           + + +L   + LF+K   SQ+DL+     
Sbjct: 123 ------TQKRQLEKNLKDAQISRDNAYIEYQNAKNNLERTEELFKKGFASQSDLDTARFN 176

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
             K+    + +I + +N L+ I E YD         LK + RDLE ++ +       L+ 
Sbjct: 177 FEKA----KNSITQAENNLKLIKENYD-------TQLKTLQRDLEASKLSLEKAKIDLSN 225

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            ++  +   I +P +G +              +  LM ++  +K   +  +V    I  V
Sbjct: 226 AKRNLDNTIIRAPFSGIVANVNVV-KGQNISSNVTLMTLL-DTKNVELSLEVDETDIGKV 283

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             G    +    + D    +F+  + +I P  +  +N       ++V +++      + +
Sbjct: 284 FVGLPVRISLDAFPDE---EFEGKVIRISPTATISNNI----PIFKVRVRVP-----NKD 331

Query: 403 IELRNGFPAEVLFTAKNT 420
             L+ G  A+        
Sbjct: 332 FRLKVGMSADGDIILLER 349


>gi|163786218|ref|ZP_02180666.1| hypothetical protein FBALC1_13572 [Flavobacteriales bacterium
           ALC-1]
 gi|159878078|gb|EDP72134.1| hypothetical protein FBALC1_13572 [Flavobacteriales bacterium
           ALC-1]
          Length = 452

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/399 (13%), Positives = 132/399 (33%), Gaps = 38/399 (9%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQI 78
            L    I+G+I   + LP   +++  G++     +     I+SP  G I+++ V  G  +
Sbjct: 36  FLGAFAIVGIII--MFLPWTQNITGGGQVTTLTPDQRPQNIQSPIPGRIEQWFVREGDFV 93

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  ++   ++++       +    NL      ++ A       Y    KA   +   L
Sbjct: 94  AKGDTIMKISEVKS-------EYFDPNLVQRTTQQREAKALSVTSYGEKVKALNRQIGAL 146

Query: 139 LDFLG-KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
               G K     +K+    +     S+ ++  +       R             ++  ++
Sbjct: 147 SQERGLKLEQARNKLIQSKLKVQSDSIDLEAAKTNKQIAQR--------QFDRTVTLQEE 198

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                K++ +K    Q    +      K      E I+ Q   +  +N  Y +   +  +
Sbjct: 199 GFKATKDVEDKRLKLQGTEAKLISQENKLLASRNEVINSQ-VEISRVNAAYSDKISKAQS 257

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            +          +       ++++  +   + + + +P  G I            ++ + 
Sbjct: 258 DMFTAQSSQFDTEAQVTKLDNQVSNYQMRSDLQFVTAPYDGYINKVIRGGVGQTFKEGES 317

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR--------FPHYADIREKKFKAIIEK 369
           L+ I+P      +   V P  +  +  G    V+        F  + ++    + A +  
Sbjct: 318 LVGIMPAQVDLAVETFVEPIDLPLLHIGERVRVQFDGWPAIVFSGWPNVSYGTYGAKVVA 377

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           I+  IS           + V+L   +        ++R G
Sbjct: 378 IENFISDNGK-------FRVLLAPDEEDHKWPK-DIRAG 408


>gi|330873319|gb|EGH07468.1| outer membrane channel protein TolC [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 398

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 3/102 (2%)

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           ++  +  +         PL+ IVP S    + A V    I  +  G    V F  +    
Sbjct: 2   VLDMKVHTIGGVVGLGTPLLDIVPESSELVVEAHVAINDIDRISIGKLTDVHFSAFNSAT 61

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
               + I+ +I     + +     + YY V  K+T+      
Sbjct: 62  TPVIEGIVTRISADRLKDE---AGEPYYLVRAKLTEKGLKRR 100


>gi|289547877|ref|YP_003472865.1| secretion protein HlyD [Thermocrinis albus DSM 14484]
 gi|289181494|gb|ADC88738.1| secretion protein HlyD family protein [Thermocrinis albus DSM
           14484]
          Length = 374

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 115/360 (31%), Gaps = 49/360 (13%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V  G  + +G  L   +  +    +D  +  IK L       +     L  + 
Sbjct: 53  GKVTRVYVNLGDHVRKGDILAELDPSDYQLKVDTLEAQIKALESQRRQLEIQYKRLTEQL 112

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +  KA    EE+++                                            +
Sbjct: 113 SLQLKASRITEEEVMAKERALLH------------------------------------Q 136

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              L A L    KD    ++L  K         + +        + R      + +    
Sbjct: 137 MEELDAQLKKVSKDRERYEDLTRKGLFPLQRYEEIDTQYKVLLEKRRALEKNLEELRLSY 196

Query: 245 NELYDEANLEFAN--YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +     +L  A+   L+E+ + ++  +        +  + +   +   + +P  G I  
Sbjct: 197 QKSQSITHLHRADLMRLEELRQQIQSLENQIEALKKQKELAQNQLQYTYLRAPFDGVIAK 256

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  S  +  +  QP+  +V      Y+   +   ++  VK G  A VR   Y D   K 
Sbjct: 257 -RFVSPGDVIRAGQPVFSVV-DPSSLYVEVLLEETKLMGVKPGAKAYVRLDAYPD---KV 311

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIE-LRNGFPAEVLFT 416
            + ++E+I P  +        ++   E+ +V+ +I   +  +  +I  LR G   EV   
Sbjct: 312 LEGVVEQISPASAATFALVPRDVSAGEFTKVVQRIPVKIRINSKDIHLLRVGMGGEVEIK 371


>gi|297618485|ref|YP_003703644.1| secretion protein HlyD [Syntrophothermus lipocalidus DSM 12680]
 gi|297146322|gb|ADI03079.1| secretion protein HlyD family protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 370

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/373 (14%), Positives = 114/373 (30%), Gaps = 64/373 (17%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N+V++    SG ++K  V  G  +  G  +   ++ +    +D    S++  R + +
Sbjct: 57  VAGNIVDVSPKASGRLEKLLVREGEYVKAGQVIAELDNDQYKTAMDQAAASLELARANYE 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                L  L                                     ++V R+   ++   
Sbjct: 117 RLPEDLKSLA------------------------------------AAVERAQGAQVAAQ 140

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
             +   R+ LE+    L              ++LF   AV++  L   E         L 
Sbjct: 141 AQVESARIALEDAKRSLEQ-----------NQSLFAAGAVAKESLLAAESRYATCKAALE 189

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 K     +++   +      + +      ++Q     A  +++L       E   
Sbjct: 190 AAEANAKAAQAAVDDASSKWEAAKKSGVPAGLAQIKQA--EAAYRLARLNY-----ENTI 242

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP++G ++              Q L+  V     T++ A +   ++  +K G    VR
Sbjct: 243 IKSPVSGMVLKTSV-EVGETVSAGQTLVT-VCDLSSTWVAANIDENKVGRIKVGQKVEVR 300

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIELR 406
              Y       F   + +I                +  Y +V  ++   +A     +EL+
Sbjct: 301 LDAYPGR---VFDGKVVEIGGATQSTFALIPTENTSGNYTKVTQRVPVKIAVEGKGVELK 357

Query: 407 NGFPAEVLFTAKN 419
            G  A+V      
Sbjct: 358 PGLSAQVKIRTSK 370


>gi|167582512|ref|ZP_02375386.1| secretion protein, putative [Burkholderia thailandensis TXDOH]
 gi|167621101|ref|ZP_02389732.1| secretion protein, putative [Burkholderia thailandensis Bt4]
 gi|257137761|ref|ZP_05586023.1| secretion protein, putative [Burkholderia thailandensis E264]
          Length = 422

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 123/398 (30%), Gaps = 52/398 (13%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +  G +  +  +V++ +  +G++ K  V  G  + +G  L T                 
Sbjct: 59  TTVDGVLTPDTGLVKVYAQQTGVVLKKNVVEGQHVTRGQMLYTVST-------------- 104

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                D+   A    +  L+D   +  ++  +  +         
Sbjct: 105 ---------------------DLQSAAAGQTQAALIDQAQQRKASLQQELDKTKRLQQDE 143

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                +++ S+      ++++ +  R   S      +    L  ++ +S++   Q+E  +
Sbjct: 144 RDTLQSKIASLRAELAGIDDQIAAQRTRTSLAADAASRYAGLLAQDYISKDQAQQREADL 203

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
               L+ R  ++          +   EA  + +    +    L Q  R+  D    L   
Sbjct: 204 ----LDQRSKLNSLMRDRASTAQTLKEALNDLSGLSLKQQNQLSQIDRSVIDVDRTLIES 259

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E  RE   + +P  GT            A  S PL  IVP          V    +  V 
Sbjct: 260 EAKRE-FVVTAPETGTATAV-IAEPGQTADTSHPLASIVPTDAHWQAYLFVPSAAVGFVH 317

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN---------NLQTQEYYEVILKIT 394
            G    VR+  Y   +  +++A +  I                     +  YY + + + 
Sbjct: 318 VGDRVLVRYQAYPYQKFGQYEASVVSIARTALSAAELATSGGPAAQTSSGTYYRITVALK 377

Query: 395 DLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             + +       L+ G   +     +   L + ++ P+
Sbjct: 378 SQSVTAYGKAQPLQAGMALQADILQERRRLYEWVLEPL 415


>gi|222530567|ref|YP_002574449.1| RND family efflux transporter MFP subunit [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222457414|gb|ACM61676.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 549

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 61/397 (15%), Positives = 126/397 (31%), Gaps = 36/397 (9%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           I+   N   + S  +G I+K  V+NG  + +G  +   +D +    I+  K  + +L   
Sbjct: 64  IVQSSNTRNVISKVNGAIEKIFVKNGQYVKKGDLIAKIDDSQAVFKIEALKRQLLDLELQ 123

Query: 110 IDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            +  +  L    L +  D   +   + E   +    +  +            +      K
Sbjct: 124 RENFQRQLQNFTLKSPQDGFVQNLTTSEGMFVSQEMQVMTIVDDSKMKLSVQLPAWCYGK 183

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND---LNQQERIVY 224
           + R +   +   DL ++   +   L S          +F+   V  N    L +  R   
Sbjct: 184 VKRGQKAEVVVSDLMDRVDGVVEGLGSRIYKNQDGVMVFDAKVVVSNKNGSLTEGMRASV 243

Query: 225 KSTLELRENIHEQKNML--------------RHINELYDEANLEFAN-------YLKEIS 263
              L   E +      +                + +++ E   +             E+ 
Sbjct: 244 SLKLSNGEKVTSLSEGILEVFSKKIIVSPVSGRVEKVFVENGQKVKTGSLLLKFSTDEVE 303

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             ++Q      D  S++   E   +   +L+PI G I         +     Q +   V 
Sbjct: 304 MQIKQLDLKIEDIKSQIKAAEDDLKNYEVLAPIDGKIADLNL-QDGDVVTVGQMICS-VY 361

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             K   I A+V    I  +K G    ++       R +  +  + +I        N   +
Sbjct: 362 DPKHLVISAQVEELDILKIKPGQKVNIKLDAVGSTRNRPLEGYVAEISEKAQSDSNGSVS 421

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +  + V ++       +NN  ++ G  AE     K+ 
Sbjct: 422 K--FVVKIE------FENNSNIKIGMHAEAEIILKSK 450


>gi|300866604|ref|ZP_07111292.1| chromosome segregation ATPase-like protein [Oscillatoria sp. PCC
           6506]
 gi|300335376|emb|CBN56452.1| chromosome segregation ATPase-like protein [Oscillatoria sp. PCC
           6506]
          Length = 666

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 73/627 (11%), Positives = 176/627 (28%), Gaps = 224/627 (35%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
             + ++     + W+ L  IE +V + G++  +D   +I++P +G + +  VE+G ++ +
Sbjct: 24  LWMIMLMTTSALVWAYLAKIEQAVPAVGQLELKDGSRDIQAPTTGAVVRLHVEDGDRVEK 83

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLR-------------------CHIDTEKSALDFLN 121
             PLLTF        +D  K     L                     ++++       L 
Sbjct: 84  NQPLLTFSPTAPGADLDSVKKVKDALEKENKFYEDVVNGRIQGPLPSNLESSIKDRQSLI 143

Query: 122 NKYDVLEKAFE--------------------------------SREEQLLDFLGKYHST- 148
           ++  VL+   +                                + + Q+ +   +     
Sbjct: 144 SQNQVLQALIDELYLNRGGGGSFDQSQQGLYINYRSEYLSRVAAAQGQVQELEKQLKQAV 203

Query: 149 ------------CSKVFNYGISSV---YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                        ++  NY    +    + L     +++S    R   + + +  + +  
Sbjct: 204 DAETAARDQLLIANQQLNYAQKQLENTEQQLNYSQEQLKSAEQQRRLAQEQLTKSQEVFK 263

Query: 194 SHQKDLTMMKNLFEKNAV--------------SQNDLNQQERIVYKSTLE---------- 229
           S +  L  +  L ++ A+              S++++ +Q+  + +   E          
Sbjct: 264 SQKNILDRLAPLVQEGAIAELQKERQDQEVLKSESEVLRQQDQIKQREGEMNSRRGEINT 323

Query: 230 ---------------------LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL-- 266
                                ++  I  QK     I E  + A  +  N     +R+L  
Sbjct: 324 RRGEINSRRGEINAREGEFQKIQAEIERQKGEQERIVESINRAQEQLQNTKDAWARELYT 383

Query: 267 --------------------EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                                +NQ+  ++  ++L   ++TR+ + + +PI+G I   +  
Sbjct: 384 RIADNQKQIASSDSQLSRLKLENQKKLSEVNAQLEKAQQTRDTQLMKAPISGIIYDLKPS 443

Query: 307 S-----------------SSNYAQQSQP-----------------LMKIVPHSKLTYIRA 332
           S                  ++  +  +P                 L+KI+P         
Sbjct: 444 SKEKAELELKNDDVCQYVITSVIKPGEPRPQRCKEAYYEAQQTEKLLKILPDENGIEAVV 503

Query: 333 KVTPKQIQHV-------------KKGY--------------------------------- 346
            +    +  V               G                                  
Sbjct: 504 YLENSNVALVLDSLRRKREKLEKYNGKELDGEKIDCEKGKACICPEKEVNRQKLDLNAYD 563

Query: 347 --TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--- 401
                V    +  +     +  + KI    ++    L+    ++  +K+    F+ N   
Sbjct: 564 CVPVEVNVEAFPAMEFGTVQGEVTKISKD-AEAPTELRKYYAFKTTIKLKSQNFTLNKGK 622

Query: 402 ----NIELRNGFPAEVLFTAKNTTLAQ 424
                + L+ G            ++ Q
Sbjct: 623 ENQVEVALQTGMAVSSNINIGKRSVLQ 649


>gi|227326949|ref|ZP_03830973.1| protease secretion protein [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 101

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 46/90 (51%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +  +R+   +++   LL + G  G + W++  P++  V  +G ++   N   ++    
Sbjct: 11  MNQTARRDEKRAVRLGWLLVLAGFGGFLLWALFAPLDKGVMVNGSVVISGNRKVVQHNQG 70

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           GI+ K QV++G ++  G  LLT  +++   
Sbjct: 71  GIVDKIQVKDGDRVEAGQILLTLNEVDARS 100


>gi|225677247|ref|ZP_03788235.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590712|gb|EEH11951.1| secretion protein, HlyD family [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 175

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     + +L   GI G+  WS + PI+ +V +SGE++   N   ++    GII K  V+
Sbjct: 96  PLFFGLVVILIFFGIGGI--WSAIAPIDGTVHASGEVIVSSNRKIVQHLGGGIISKILVK 153

Query: 74  NGSQILQGTPLLTFEDIETTDL 95
            G  + +  PL+   D+     
Sbjct: 154 EGQAVKKDEPLVLLSDVNEKAN 175


>gi|163754324|ref|ZP_02161446.1| putative HlyD-family transporter [Kordia algicida OT-1]
 gi|161325265|gb|EDP96592.1| putative HlyD-family transporter [Kordia algicida OT-1]
          Length = 452

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 71/423 (16%), Positives = 150/423 (35%), Gaps = 17/423 (4%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++    +  + II  +  S LL     + +   I +E+    + +  SG +    VE G 
Sbjct: 43  IQWGISVVFVIIILFLVGSSLLSYNDIIRARVTITSENPPAHLTAKTSGKLTSIFVEAGQ 102

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++     L   E+    + + L K  +K+ +      ++  D LN  +   +      + 
Sbjct: 103 KVEADQVLAVIENTANFEDVQLLKKKLKDFK----PNQNDFDSLNYTFPT-KLKLGPIQS 157

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
               F  +Y +  +        +   ++ ++L R+R+   N    +N+    ++ L + +
Sbjct: 158 VYNAFRAQYLTYLNYTTFSEDKNQAANISLQLGRVRNRLRNS---KNQLDYYKSELENSK 214

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL-EF 255
           K     K LF + +VS+ +   QE +   +       +   +N    I  L +       
Sbjct: 215 KRYEKFKRLFSRQSVSEREFKDQENLYLGAQRAYEGLLASIENDESSILTLQNNLRQASV 274

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            +   EIS D    Q    D  +++   E+      + SPI G +     +S        
Sbjct: 275 GDKSSEISTDQNLEQAK-QDLENQILQWEQQF---VLKSPIQGEVTVFDIWSKYQNVNVG 330

Query: 316 QPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           Q L  ++P      I R     +    ++ G +  ++   Y           I  I  + 
Sbjct: 331 QDLFTVIPDEIEGIIGRVSFPVQNSGKIEVGQSVIIKLDSYPYQEWGSLSGEIINISGV- 389

Query: 375 SQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
             Q N       Y   LK+  L  S + +I+ +           +  T+ Q I + + + 
Sbjct: 390 -PQLNPQGGPPMYVAYLKVKSLESSFEKSIDFKQEMEGAAEIVVEELTVMQRIFYQLREV 448

Query: 434 WPK 436
           + +
Sbjct: 449 FSR 451


>gi|206575592|ref|YP_002235798.1| microcin E492 secretion protein MceH [Klebsiella pneumoniae 342]
 gi|206570436|gb|ACI12082.1| microcin E492 secretion protein MceH [Klebsiella pneumoniae 342]
          Length = 425

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 65/387 (16%), Positives = 126/387 (32%), Gaps = 56/387 (14%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V+ G +I +   L   +  +TT    +       +   +         ++   
Sbjct: 74  GYVVRSYVKEGQKIRKWDRLYELDTSKTTRSGVVSDNEFNEITSQL-------HGIDEII 126

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             LEK  +   + + D   KY      + +  + +  + L+     MR+    R +    
Sbjct: 127 RNLEKGRDETLQSIKDQRSKYKEAY-DISSSIVRTAEQGLQKMENNMRNYEQYRKNGLIN 185

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +  L   +S + +    + ++  +N  +   +   ER V   T E    I++ K     +
Sbjct: 186 NDQLTNQMSLYYQQENSVLSIKNQNIQNALQIKNLEREVQIQTSEYDSRIYQMKLQRNEL 245

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +   ++ L                                      I SP  G I    
Sbjct: 246 KKELIKSGLN---------------------------------SSIIIRSPSDGIIDTLN 272

Query: 305 SFSSSNYAQQSQPLMKIVPHSKL-TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             S          L +I+P      Y+   +    I ++KKG    +R+  +A  +  +F
Sbjct: 273 V-SQGQIVNAGDTLSQIIPEEDRKLYLILWIPDMAIPYIKKGDHVRIRYDAFAYEKFGQF 331

Query: 364 KAIIEKIDPIISQQDNN-----------LQTQEYYEVILKI--TDLAFSDNNIELRNGFP 410
             II+ I    S Q              L    YY V++      + ++   I L NG  
Sbjct: 332 NGIIQSISKSPSSQQEMLSYHLLDNIKLLSGHAYYRVMVTPENDRIFYNKEEIHLENGMR 391

Query: 411 AEVLFTAKNTTLAQEIIHPITDNWPKI 437
           AE+    +N  + Q +I P+ D     
Sbjct: 392 AEITLFLENRKIYQWMISPLYDVVKSA 418


>gi|312621361|ref|YP_004022974.1| efflux transporter, rnd family, mfp subunit [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201828|gb|ADQ45155.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 548

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 67/407 (16%), Positives = 134/407 (32%), Gaps = 38/407 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ S+  SG +    N   + S  +G ++K  V+NG  + +G  +   +D +    I+  
Sbjct: 55  LKQSLLVSGTVQ-SRNTKNVISKVNGTLEKIFVKNGQYVKKGDLIAKIDDSQAVFKIETL 113

Query: 100 KVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           K  + +L    +  +  L    L +  D   +   + E  L+    +  +          
Sbjct: 114 KRQLLDLELQRENFQRQLQNFILKSPQDGFIQNLVAEEGLLVSQGMQLMTIVDDSKMKLS 173

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH-QKDLTMMKNLFEKNAVS--QN 214
             +      K+ + +   +   DL ++   + A L S   K+         K AVS    
Sbjct: 174 VQLPAWCYGKVKQGQKTEVVVSDLMDRVDGVVAGLGSRIYKNQDGAMVFDAKVAVSNKNG 233

Query: 215 DLNQQERIVYKSTLELRENIHEQKNML--------------RHINELYDEANLEFAN--- 257
            L +  R      L   E +      +                I +++ E   +      
Sbjct: 234 SLTEGMRASVSLKLSNGEKVTSLSEGILEVFSKKSIVSPVSGRIEKVFVENGQKVKTGSL 293

Query: 258 ----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                  +I   ++Q      D  S++   E   +   ILSPI G I     F   +   
Sbjct: 294 LLKFATDDIEMQIKQLDLKIEDVKSQIEAAEDDLKNYKILSPIGGKITDLN-FQDGDIVT 352

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q +   V   K   I A+V    I  +K G    ++       +    +  + +I   
Sbjct: 353 AGQLICS-VYDPKHLVISAQVEELDILKIKPGQKVNIKLDAVGSTKSNSIEGYVTEIS-- 409

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +   +  +   + V ++       +NN  ++ G  AE     K+ 
Sbjct: 410 -EKAQADSSSISKFVVKIE------FENNNSIKIGMHAEAEIILKSK 449


>gi|161505464|ref|YP_001572576.1| hypothetical protein SARI_03622 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866811|gb|ABX23434.1| hypothetical protein SARI_03622 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 424

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 65/408 (15%), Positives = 135/408 (33%), Gaps = 64/408 (15%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+ SGE+      V I S   G +    V  G  + + TPL   +  ++T          
Sbjct: 53  VTVSGEVTTWPRPVNIYSDVQGFVVDRFVTEGQVVKKNTPLYQIDVSKST---------- 102

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                     ++ +    +  D+                    +T  +  +  IS +  S
Sbjct: 103 ----------RNGVVSSRHHADI--------------------TTQIRQVDNIISGLKDS 132

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLL----RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            K  L  +    +  +     SS +       +   +K++   +    +  ++++ L  Q
Sbjct: 133 KKATLDALEKQKIQYIQALQSSSDIIRHAEEGIRIMKKNMDNYRQYQSRGLITKDQLTNQ 192

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E I Y+    L     + +     +  L  +  ++ A +   I + + Q       E+ K
Sbjct: 193 ETIYYQQQSNLLGLNSQNEQNALQLTSLESQIRIQAAEFDNRIYQMILQRY-----ELQK 247

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQ 338
             I         I +   G I      +          L +I+P + +  Y+   V    
Sbjct: 248 ELINTDIESAVIIRALSDGKIDSLSVST-GQMVSAGDSLAQILPDTVRHYYLVLWVPNTA 306

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQDNNLQTQ---------EYY 387
           + ++  G    +R+  +   +  +F  +I+ I   P   Q+    Q            YY
Sbjct: 307 VPYITTGDRVNIRYEAFPAEKFGQFPGVIQSISRAPATPQEMRTYQGAPQNTSSLSVPYY 366

Query: 388 EVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           +VI ++   +      +  L NG  A+V    +   + Q ++ P  D 
Sbjct: 367 KVITRLDRQSITYGGKSRPLENGMKAQVTLFLEKRKIWQWMLSPFYDM 414


>gi|218779870|ref|YP_002431188.1| secretion protein HlyD family protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761254|gb|ACL03720.1| secretion protein HlyD family protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 394

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/377 (12%), Positives = 126/377 (33%), Gaps = 28/377 (7%)

Query: 50  ILNEDNVVEIKSPFS----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           I    N+  ++        GI+ +   + G  + +G  L   +D      +   K  +  
Sbjct: 33  IKMSGNIEVVQVDLGFELSGILAERLADEGETVSKGDLLARLDDSNYVLQVKQAKAELGY 92

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +  +D  ++      ++ + + +      ++          + ++      +++ ++  
Sbjct: 93  AQAVLDELEAG-----SRPEEIAQVKAMASQREYALKELLSGSRAQEIKEAAAALDQAKA 147

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQ--KDLTMMKNLFEKNA-VSQNDLNQQ-ER 221
             L     + L + D E    +  +   S Q  +      ++ ++    ++  +    ER
Sbjct: 148 GALAAESKVALAKADYERYHKIFESGGISIQAVQTYETQMDIAQRGFEEAKARVQAANER 207

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
           +        +E I + +  L      Y+               ++ Q +         + 
Sbjct: 208 LHLVKEGPRQELIRQARAALEQAEADYELVKAGPRK------ENIAQAKARVESAREAVK 261

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           I EK  +   + +P  G I+  +S     Y     P++ +       ++RA V+ + +  
Sbjct: 262 IAEKRVQDSLLKAPFDGVILA-KSAEPGAYMNPGTPVVTLA-QMNTVWLRAFVSERDLGR 319

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFS 399
           ++ G    V    Y D +     + I        +  Q    +    Y V +++++   +
Sbjct: 320 IRLGMEVEVSTDAYPDKKYPGTLSFISSESEFTPKSVQTFEERLNLMYRVKIELSNQDMA 379

Query: 400 DNNIELRNGFPAEVLFT 416
                L+ G PA+ +  
Sbjct: 380 -----LKPGMPADAVIR 391


>gi|290512297|ref|ZP_06551664.1| secretion ATPase [Klebsiella sp. 1_1_55]
 gi|289775292|gb|EFD83293.1| secretion ATPase [Klebsiella sp. 1_1_55]
          Length = 428

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/399 (13%), Positives = 130/399 (32%), Gaps = 56/399 (14%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
            +GE++   + V + +P  G I    V+ G  + +G PL   +    T   ++  V I  
Sbjct: 59  VNGEVITLPHSVNVYAPQQGFIVSQYVKVGDLVKKGQPLYEIDISRDTTTGNVSSVQI-- 116

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                                             +   +  +   ++ N    +   +L 
Sbjct: 117 ----------------------------------EVNKEKIANAEEIINKLSQNKQETLS 142

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               ++++   +  ++    +   A L     +L+   +      ++++  N Q  + ++
Sbjct: 143 SIEKQLKANKESLKEINRLLANALAGLKKMHDNLSSYDSYLRDGLITKDQYNYQHSLYFQ 202

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
                +  + ++  +   I +   +   + A++  +I+      Q    D  ++L     
Sbjct: 203 QQSTYQSLVSQKMQLESQITQYNSDKITKIADFDNQITAQ----QNQINDFKNQLVE-SN 257

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKK 344
            +    I +   G I      +          L +I P      Y+   +    I +VK 
Sbjct: 258 AKGNAIIKATTEGRIESLSV-TKGQMVDNGSSLAQIKPTGNIEYYLILWLPNNSIPYVKP 316

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN-----------NLQTQEYYEVILKI 393
           G    +R+  +   +  +F   +  I  + + +             N Q    Y+ I+KI
Sbjct: 317 GDVINIRYDAFPSDKFGQFPGEVISISSVPAPRQEMSEYTNVSNGTNQQELALYKTIVKI 376

Query: 394 TDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +  FS     ++L NG  A  +   +   L   +  P 
Sbjct: 377 KNKTFSYNGKTLKLSNGLKARAVVFLEKRPLYMWMFTPF 415


>gi|186472312|ref|YP_001859654.1| hypothetical protein Bphy_3455 [Burkholderia phymatum STM815]
 gi|184194644|gb|ACC72608.1| conserved hypothetical protein [Burkholderia phymatum STM815]
          Length = 400

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 61/441 (13%), Positives = 149/441 (33%), Gaps = 59/441 (13%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +L + +    + +   +   + G + +  +  +E+      EI++  +V  ++   SG++
Sbjct: 5   SLPQFNDVPWRWIAYGASTIVAGAVAFGFVHEVELKQDVQCEIVSPSDVK-VQG-TSGLV 62

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V  G ++ QGTPL +          DL   S    R   D                
Sbjct: 63  SSVYVHPGERVHQGTPLFSV-------QRDLSLASDGRQRPQFD---------------- 99

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                   EQ+ D   +        ++   + +   L        +       L+ +   
Sbjct: 100 --------EQMRDEQIRMVDLQ---YDQRRAQLAAQLDASNATAAARQAEARALDEQIEQ 148

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            R L+S  Q+ L  ++++ +   V+ + + Q     ++  + + + +  ++ +   I  L
Sbjct: 149 NRQLVSEAQQKLGRLQSVSD--YVTADRIEQASADTHQMKISVAQGLARRQQLAGEIVAL 206

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
           +       A   +  +R + + Q    D   +    E+ R+  TI +P +G + ++    
Sbjct: 207 HSTQGNLAAQLKENDARHVREIQ----DIRMR---FEQARQDSTISAPKSGVVAFSNLV- 258

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRA-KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                  +   + IV   +     A ++  ++   V  G T  ++F  +  ++   + A 
Sbjct: 259 PGRTLDAADVALVIVTDDRSALRAALRMPSRRRGFVHTGQTVRLKFDAFPYVKFGTYDAR 318

Query: 367 IEKIDPIISQQD------------NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           ++ I P   Q                          L+     +     ++  G  A   
Sbjct: 319 VDAISPTTIQSGMSVAPASPAAPKETGDGDFMAWATLRGRTFDYGKQRFDILPGMRATAS 378

Query: 415 FTAKNTTLAQEIIHPITDNWP 435
              +  T+A+ ++ P+     
Sbjct: 379 IVVERRTIAEWVLEPLFRTLR 399


>gi|312126467|ref|YP_003991341.1| efflux transporter, rnd family, mfp subunit [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776486|gb|ADQ05972.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 548

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 63/407 (15%), Positives = 135/407 (33%), Gaps = 38/407 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ ++  SG + +      I S  +G ++K  V+NG  + +G  +   +D +    I+  
Sbjct: 55  LKQTLLVSGTVQSSSTRNVI-SKANGTLEKVFVKNGQYVKKGDLIAKIDDSQAAYKIESL 113

Query: 100 KVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           K  + +L    ++ +  L    L +  D   +     E  L+    +  +          
Sbjct: 114 KRQLLDLELQRESFQRQLQNFTLKSPQDGFVQNLAVEEGLLVSQGMQIMTIVDDSKMKLS 173

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-- 215
           + +      K+ + +   +   DL +K   +   + S          +F+   V  N   
Sbjct: 174 TQLPAWCYGKVKQGQKAEVVVSDLMDKVDGVVESIGSRMYKNQDGVMVFDAKVVVSNKNG 233

Query: 216 -LNQQERIVYKSTLELRENIHEQKNML--------------RHINELYDEANLEFAN--- 257
            L +  R      L   E +      +                I +++ E   +      
Sbjct: 234 SLAEGMRASVSFLLSSGEKVTSLSEGILEVFSKKSIVSPVSGRIEKVFVENGQKVKTGDL 293

Query: 258 ----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               +  +I   ++Q      D  S++   E   +   ILSPI G I         +   
Sbjct: 294 LLRFWSDDIEVQIKQLDLKIEDIKSQIEAAEDDLKNYKILSPIDGKIADLNL-QDGDVVT 352

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q +   V   K   I A+V    I  +K G    ++       ++K  +  + +I   
Sbjct: 353 AGQIICS-VYDPKHLMISAQVEEIDILKIKPGQKVNIKLDAVGSTKDKPIEGYVTEIS-- 409

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +   +  +   + V ++       +NN  ++ G  AE     K+ 
Sbjct: 410 -EKAQVDTSSISKFVVKIE------FENNNSIKIGMHAEAEIILKSK 449


>gi|19718341|ref|NP_604413.1| accessory protein [Lactobacillus acidophilus]
 gi|19570486|dbj|BAB86321.1| accessory protein [Lactobacillus acidophilus]
          Length = 464

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 65/433 (15%), Positives = 156/433 (36%), Gaps = 34/433 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + + +++ ++  + + +    E+++++SGE+      V ++S  +  I +  ++ G  + 
Sbjct: 30  LIVPAVMALVIALAFVLFAKREVTITTSGELTPVQKAVSVQSTTTSRIIENHLKEGRFVK 89

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE-SREEQL 138
           +G PL+T+ D+     + + +   K L+            L +  D   +       + L
Sbjct: 90  KGDPLVTYHDVNNPTQLKVLETQTKQLQDQTAALDKYKTGLTSNQDTFNQDDPFGYRQAL 149

Query: 139 LDFLGKYH--------------------STCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            D+L +                      +   ++    I+S  +++      + +I    
Sbjct: 150 QDYLSQRRIYALGSQQVSGQQSSENSKTAKVGQLLQQSIASSNQNIAAYQALLTAIQHQS 209

Query: 179 --LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              D +  S L ++ ++  +       +  + + +SQ D           +L+L++  +E
Sbjct: 210 GYNDSQPYSYLYKSFIAESKDMTGSDLDKVKTSYISQIDAKMDTEKSQLESLKLQQANNE 269

Query: 237 QKNM-LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
             +   + + E   +     A+ LK ++    Q  ++  +   K+ IL+      T+ +P
Sbjct: 270 ASDTSQQQLAENEQKMAALQASQLKSVADQKNQAAQSLTELNGKVAILKDQTSDVTVKAP 329

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +GT+  + S    +Y      L +I P     K   +   V+P +I  VK+G    ++ 
Sbjct: 330 TSGTLHIDASLQGKHYVPSGTTLAEIYPVLKHQKQIKLTLAVSPTEITSVKQGQKVRLQV 389

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                 R      I+  I   I       +    + V   ++          L  G   +
Sbjct: 390 S-----RNIPVPIILNGIVSNIDTAPTITKNGNLFMVTANVS--LSKQQARSLHYGLTGK 442

Query: 413 VLFTAKNTTLAQE 425
           V       T    
Sbjct: 443 VSIITGQKTYFNF 455


>gi|302872816|ref|YP_003841452.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575675|gb|ADL43466.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 541

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 57/402 (14%), Positives = 139/402 (34%), Gaps = 39/402 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ ++ +SG + +      I S  SG +KK  V+NG  + +G  +   +D +    I+  
Sbjct: 55  LKQTLLASGTVQSSKTRSVI-SKTSGTLKKVFVKNGQYVKKGNLIAQIDDTQAIAKIESL 113

Query: 100 KVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           K  + +L    ++ +S L    L +  D   +   ++E  L+    +  +         I
Sbjct: 114 KRQLSDLELQRESFQSQLQNFILESPQDGFVQNLSAQEGLLVTQGMQIMTIVDDSKMKMI 173

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH-------------QKDLTMMKN 204
             +      K+ + + + +   ++ +        + +              +  L     
Sbjct: 174 VQLPAWCYGKVKKGQKVDVAISEITSTIEGTIEGIGNRLYKNQDNILGFDVKVLLPNRNG 233

Query: 205 LFEKNAVSQNDLN----QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL- 259
           +  +   +   LN    ++   + +  LE          +   I +++ E   +  +   
Sbjct: 234 MLLEGTKASVVLNLSGGEKAIALGEGVLEAFSKKTVLSPVTGKIEQVFVENGQKVKSGQV 293

Query: 260 ------KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                 ++I R ++Q      D  +++   EK  +   +LSPI G +V        +   
Sbjct: 294 LLRFSSEDIERQVKQLDLKIEDIEAQIEEAEKELKNFEVLSPIDGKVVDLNL-QDGDIVT 352

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q +   V   +   I A V    I  ++ G  A ++       + K  +  +++I   
Sbjct: 353 AGQVICS-VFDPENLVITAYVEELDILKIRPGQKAEIKLDAVPSTKVKPVEGYVDEIS-- 409

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             ++  +  +   + V +K  +            G  A+   
Sbjct: 410 --EKAQSEDSISKFIVKIKFKNPGSVKF------GMHADAEI 443


>gi|310687096|ref|YP_003943973.1| accessory protein [Lactobacillus casei]
 gi|308319973|gb|ADO27712.1| accessory protein [Lactobacillus casei]
          Length = 458

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 65/433 (15%), Positives = 156/433 (36%), Gaps = 34/433 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + + +++ ++  + + +    E+++++SGE+      V ++S  +  I +  ++ G  + 
Sbjct: 24  LIVPAVMALVIALAFVLFAKREVTITTSGELTPVQKAVSVQSTTTSRIIENHLKEGRFVK 83

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE-SREEQL 138
           +G PL+T+ D+     + + +   K L+            L +  D   +       + L
Sbjct: 84  KGDPLVTYHDVNNPTQLKVLETQTKQLQDQTAALDKYKTGLTSNQDTFNQDDPFGYRQAL 143

Query: 139 LDFLGKYH--------------------STCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            D+L +                      +   ++    I+S  +++      + +I    
Sbjct: 144 QDYLSQRRIYALGSQQVSGQQSSENSKTAKVGQLLQQSIASSNQNIAAYQALLTAIQHQS 203

Query: 179 --LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              D +  S L ++ ++  +       +  + + +SQ D           +L+L++  +E
Sbjct: 204 GYNDSQPYSYLYKSFIAESKDMTGSDLDKVKTSYISQIDAKMDTEKSQLESLKLQQANNE 263

Query: 237 QKNM-LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
             +   + + E   +     A+ LK ++    Q  ++  +   K+ IL+      T+ +P
Sbjct: 264 ASDTSQQQLAENEQKMAALQASQLKSVADQKNQAAQSLTELNGKVAILKDQTSDVTVKAP 323

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +GT+  + S    +Y      L +I P     K   +   V+P +I  VK+G    ++ 
Sbjct: 324 TSGTLHIDASLQGKHYVPSGTTLAEIYPVLKHQKQIKLTLAVSPTEITSVKQGQKVRLQV 383

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                 R      I+  I   I       +    + V   ++          L  G   +
Sbjct: 384 S-----RNIPVPIILNGIVSNIDTAPTITKNGNLFMVTANVS--LSKQQARSLHYGLTGK 436

Query: 413 VLFTAKNTTLAQE 425
           V       T    
Sbjct: 437 VSIITGQKTYFNF 449


>gi|237803801|ref|ZP_04591386.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|237805382|ref|ZP_04592086.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331025781|gb|EGI05837.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
 gi|331026489|gb|EGI06544.1| ABC transporter periplasmic substrate-binding protein [Pseudomonas
           syringae pv. oryzae str. 1_6]
          Length = 140

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 52/140 (37%), Gaps = 7/140 (5%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           G      W+ L P++  ++  G ++       ++S   G++ K  V  G  + +G PL  
Sbjct: 1   GAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSLDGGVVSKILVSEGQTVKEGEPLFR 60

Query: 87  FEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLE----KAFESREEQLL 139
            +  +    +   +   +          +E+  L+ ++   +++     K  + R   +L
Sbjct: 61  LDQTQVEADVQSLRAQYRMAWASLARWQSERDNLEQIDFPAELIAAGQGKDPDPRLALVL 120

Query: 140 DFLGKYHSTCSKVFNYGISS 159
           +   +  S+  +      + 
Sbjct: 121 EGQRQLFSSRRQALAREQAG 140


>gi|32471242|ref|NP_864235.1| toxin secretion protein [Rhodopirellula baltica SH 1]
 gi|32396944|emb|CAD71914.1| probable toxin secretion protein [Rhodopirellula baltica SH 1]
 gi|327538888|gb|EGF25528.1| secretion protein HlyD [Rhodopirellula baltica WH47]
          Length = 449

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 57/382 (14%), Positives = 139/382 (36%), Gaps = 57/382 (14%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQ-- 71
           ++ +  ++ +G+   I   + +P + +    G ++    +     ++SP  G+++  +  
Sbjct: 23  IRFVGKVTFVGLALSIIAMVFVPWQQTARGIGTVVAIDPQQRPQPVRSPSKGVVEYVKPG 82

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           +  GS + Q   LL         +                          ++ D    A 
Sbjct: 83  LREGSYVEQDELLLRLSPFSVDGV--------------------------SQIDTQIIAM 116

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           ES+E   L  L +       +   G  S+  SLK  L   +  +      +N+ + + A 
Sbjct: 117 ESKEAAALSGL-EVAKQAVALQENGGKSLTESLKQDLEAAKQKWEQ---AKNEVTAMEAE 172

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L   +  L + + + +K  VS+ +L  +++ V     ++++     +N +  ++      
Sbjct: 173 LQDKRNQLRIAEEVSKKGLVSREELFSKQQAVESQVAKVQK----AQNAVHELSASLISK 228

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT----------REQKTILSPIAGTIV 301
             E    L++I+      ++   D M K+  +EK            ++  I +P +G I 
Sbjct: 229 EEEIEAKLQDIAIKNRDAEQKVLDAMQKINTIEKEILDLRNKRGELDRLEIRAPRSGRIQ 288

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE- 360
                  S+  ++   L  IVP +    +  +V+   +  + +G    ++F  +  ++  
Sbjct: 289 EWFGVEGSDTIKEGDQLFVIVPDTDELAVEMRVSGNDMPLIHEGDPVRLQFEGWPAVQFV 348

Query: 361 -------KKFKAIIEKIDPIIS 375
                    F   + ++ P   
Sbjct: 349 GWPSVAVGTFGGKVNRVFPTDD 370


>gi|119493809|ref|ZP_01624377.1| hypothetical protein L8106_17972 [Lyngbya sp. PCC 8106]
 gi|119452451|gb|EAW33639.1| hypothetical protein L8106_17972 [Lyngbya sp. PCC 8106]
          Length = 357

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 96/276 (34%), Gaps = 9/276 (3%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
             V R  +         Y+N+  L  +   L+A L+  +++L  +        + Q  L 
Sbjct: 78  QIVVRENQPLEQGEVIAYVNQSLLLTQKRNLQAQLTQLKQELDQLDQYVAT--LDQQILT 135

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             E    +   +  +++   +  +  + +   E   EFA   + + +   Q Q+ F    
Sbjct: 136 TLESKTSRRARQKLDDLS-VELAVVELTKSTPEVAQEFAQERRTLLKQRWQVQKQFVQSQ 194

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           S+L  +       TI +P AGTI+           +    + +IVP        A V  K
Sbjct: 195 SQLEQITSLIGHSTIRAPQAGTIIQLDLPKPGQVVESDTIIAQIVPTQVPLMFLALVAEK 254

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQDNNLQTQEYYEVILKITD 395
            I  ++      ++   Y        K  +++I       Q      ++ YYEV+++  +
Sbjct: 255 DISRIEMDQQVHLQIAVYPFREYGILKGRVKRISLNGNAPQASARQTSKAYYEVLIQPEN 314

Query: 396 LAFSDNNIE--LRNGFPAEVLF-TAKNTTLAQEIIH 428
                 N +  + +G          +   L   ++ 
Sbjct: 315 SYLVKGNHQYSIYSGMEGTADILVTQER-LLGWVLK 349



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 81/236 (34%), Gaps = 8/236 (3%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
            +L +    GL+  +  +    SV        E +V  + +  SGII++  V     + Q
Sbjct: 30  GMLLLGTFGGLVVLAGFIRYTPSVRVPVVAQPEGDVELVSAATSGIIEQIVVRENQPLEQ 89

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-YDVLEKAFESREEQLL 139
           G  +               +  +  L+  +D     +  L+ +    LE     R  Q L
Sbjct: 90  GEVIAYVNQSLLLTQKRNLQAQLTQLKQELDQLDQYVATLDQQILTTLESKTSRRARQKL 149

Query: 140 DFLG------KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           D L       +   +  +V           LK +    +    ++  LE  +SL+     
Sbjct: 150 DDLSVELAVVELTKSTPEVAQEFAQERRTLLKQRWQVQKQFVQSQSQLEQITSLIGHSTI 209

Query: 194 SHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +  T+++ +L +   V ++D    + +  +  L     + E+      +++  
Sbjct: 210 RAPQAGTIIQLDLPKPGQVVESDTIIAQIVPTQVPLMFLALVAEKDISRIEMDQQV 265


>gi|226227937|ref|YP_002762043.1| secretion protein HlyD family protein [Gemmatimonas aurantiaca
           T-27]
 gi|226091128|dbj|BAH39573.1| secretion protein HlyD family protein [Gemmatimonas aurantiaca
           T-27]
          Length = 460

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 123/378 (32%), Gaps = 50/378 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQV 72
           S   + +L ++  I  + W        +V   G +      D   +++S   G I+ + V
Sbjct: 33  SRWLIGILLVLLAIMFLPWQ------QNVQGMGYVTALSPADRPQQLQSRIDGRIEAWYV 86

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  + +G  ++   +I+      L    +       + ++SA+    NK   LE   E
Sbjct: 87  AEGQFVKKGDSIVRISEIKEEY---LNPNVLPLTVAQREAKQSAIGEKLNKASALETQIE 143

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             E+Q      K   T +KV  Y       SL+  +         R  L  +  L R  L
Sbjct: 144 QLEQQ---RELKILQTRNKVLQYQAEVRQVSLEDSVA--------RDQLRRRERLFRDSL 192

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYD 249
                             VS ND+   +    ++  +L   ++ +   +  L  I   Y 
Sbjct: 193 ----------------GLVSMNDMQSFQIKAQQTAAKLIEKQQMLAITETDLTSIPAEYG 236

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E   +  +       ++ + +   A    K+  L        I +P  G +V        
Sbjct: 237 EKISKARSDRAATLAEVSEGRSEVAKLQDKVGSLTLRSSFYVIEAPQDGYVVRANRAGPG 296

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV--------RFPHYADIREK 361
              +  +P++ + P      +   V P  +  +K G    V        +F  +  +   
Sbjct: 297 VIVKVGEPIVSVQPARPQKAVELYVKPMDVALLKPGRHVRVFFDGWPALQFSGWPQVAVG 356

Query: 362 KFKAIIEKIDPIISQQDN 379
            F A +  ID   S    
Sbjct: 357 TFGATVAVIDQFPSADGR 374


>gi|282896113|ref|ZP_06304139.1| Secretion protein HlyD [Raphidiopsis brookii D9]
 gi|281199031|gb|EFA73906.1| Secretion protein HlyD [Raphidiopsis brookii D9]
          Length = 367

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 60/357 (16%), Positives = 108/357 (30%), Gaps = 25/357 (7%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              +             I  +   LD  +  +  V + A  S    LL    +Y      
Sbjct: 7   KSQLQENIQQGNLQILQIHAQVRILDRQILAETQVAQNAINSARVDLLRNQREYQQQQVS 66

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                +S+     K K     S+   R DL              Q      + L +K   
Sbjct: 67  TQGEFLSAQANWQKAKA----SLDKARADLNFAKMDKERYQELSQIGAVGRRELEQKALT 122

Query: 212 SQN--DLNQQERI--------VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            Q    +   ER         V  + + +             I +         A+  KE
Sbjct: 123 VQQTQSILDTERKSLEMAKIKVQSAQVAINPTPAAVMIAQERIAQETARGVSNIASLNKE 182

Query: 262 ISRDLE---QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
               +E   Q +      + +L  +E    +  IL+   G I+     +     + S+ +
Sbjct: 183 KQALIERRVQLETQIKQSIKELEQVENQMRKSMILATSNGIILKLNLRNPGQVIRPSESV 242

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            +IVP S    IRA +  ++IQ V  G    +R              +++ I P +    
Sbjct: 243 AEIVPDSSELLIRALIPTEEIQKVNIGQQVKLRVGACPYPDYGTLHGVVQTISPDVITNQ 302

Query: 379 NNLQTQE-----YYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLAQEIIH 428
            N          Y+E ++K   L F     +  L++G   +    +K  T  + +  
Sbjct: 303 PNNPGTTTNRMGYFEAMVKPASLQFGQGRHQCYLQSGMEVKADIISKQETALEFMFR 359


>gi|206579541|ref|YP_002240905.1| microcin H47 secretion protein [Klebsiella pneumoniae 342]
 gi|206568599|gb|ACI10375.1| microcin H47 secretion protein [Klebsiella pneumoniae 342]
          Length = 429

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 65/444 (14%), Positives = 144/444 (32%), Gaps = 58/444 (13%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           HH+  K L          +  LS + +  L+   I       V   GE++   + + + +
Sbjct: 16  HHWKGKALLLAG-LPAWLVLSLSALFLTALVCALIFCKFTQRVDVKGEVITLPHSINVFA 74

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           P  G I K  V+ G  + +  PL   +   +T   ++    I                  
Sbjct: 75  PQQGFIVKQFVKIGDVVKKNQPLYEIDVSRSTTSGNVSAAQI------------------ 116

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                             + + +  +    +      +  ++L     ++++   +  + 
Sbjct: 117 ------------------EVINEKIANSDNIIKKLEDNKNQTLSALNAQLKTTTDSLKET 158

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                  +A L     +L+          ++++  N Q  + ++     +  + ++  + 
Sbjct: 159 NRMLVNTQAGLKKMHDNLSSYDKYLNNGLITKDQYNYQHSLYFQQQSAYQSLVSQKMQLE 218

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I +L  +   + A++  +IS    Q+     D  ++L           + S   G I 
Sbjct: 219 SQITQLNSDKITKAADFDNQISSQYNQS----NDYKNQLVE-SNANGNIIVKSTSDGRIE 273

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              + +          L +I P      Y+   +    I ++K G T  +R+  +   + 
Sbjct: 274 SLSA-TQGQTVDNGSSLAQIKPTGNVEYYLVLWLPNNTIPYLKTGDTINIRYDAFPSDKF 332

Query: 361 KKFKAIIEKIDPI------------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELR 406
            +F   I  I  +            +S   N  Q    Y+ I+KI D  F      + L 
Sbjct: 333 GQFPGEIISISSMPASRQEMSEYTNVSNSGNQQQELALYKAIVKIKDKQFEYDGKKLSLS 392

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPI 430
           NG  A+ +   +   L   +  P+
Sbjct: 393 NGLKAQAVVFLEERPLYMWMFTPV 416


>gi|1172155|gb|AAB57757.1| unknown [Rhizobium leguminosarum bv. trifolii TA1]
          Length = 140

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 53/132 (40%), Gaps = 3/132 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR+    +  + +LSI  + G+  W+    +  +V   G I+ +     I+    GI+ +
Sbjct: 9   KRSLNRHVAVVGVLSIALVCGIGGWAATTELSSAVIGEGVIVVDPRCQNIQHLTGGIVSE 68

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDV 126
             V     +  G  L+  +   T   + + + ++  L   R  +  E+   +    + ++
Sbjct: 69  LLVSENDHVTAGQVLIRLDGTTTRANLSIVESTLAQLYARRARLKAERIGAESFEVEENI 128

Query: 127 LEKAFESREEQL 138
            +    +  ++L
Sbjct: 129 TDLTSSTSAQKL 140


>gi|30014087|emb|CAD89203.1| putative membrane fusion protein [Pseudomonas fluorescens]
          Length = 114

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 44/99 (44%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H ++ +  +R+     +   +L+I+G     TW+ L P++  +   G ++       ++S
Sbjct: 16  HAYITERPERDAKFFARMGWILAIVGAGSFFTWAALAPLDQGIPVQGTVVVSGKRKAVQS 75

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
             SG++ +  V  G  + QG PL   +  +    +   +
Sbjct: 76  MNSGVVSRILVREGEIVKQGQPLFRLDQTQVAADVQSLQ 114


>gi|254414392|ref|ZP_05028158.1| peptidase, M50 family protein [Microcoleus chthonoplastes PCC 7420]
 gi|196178622|gb|EDX73620.1| peptidase, M50 family protein [Microcoleus chthonoplastes PCC 7420]
          Length = 986

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 130/370 (35%), Gaps = 49/370 (13%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           +     +++P +GII K  V+ G  +  G  L     +E    I   +  +         
Sbjct: 618 QGARSIVRTPIAGIITKIYVKPGQTVQPGQILAQLSSLELDREIATIEQQLVQA------ 671

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                           +  ++ ++Q +    +     +        +   SL+ K     
Sbjct: 672 ---------------HQVLDNAQKQRIRAEAQLVEVQAIAEAMIAKTRRESLRAKALTQG 716

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +  +   L  +   L+  +   Q+ L     L+E+ A+S+N  ++ E  ++     L  
Sbjct: 717 KLTPDIQVLNTQRQRLQERIPELQEKLQRYHQLYEQGAISRNRRDEVESELHNVESNLVA 776

Query: 233 NIHEQKNMLR---------HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              E     +                 A ++ +  + +    +   Q+  A   ++L+ L
Sbjct: 777 KTQEIAAAKQNQTDTARDLQTETASQFAAIDASEMIAQAESQMITQQQAIATLKNRLSEL 836

Query: 284 EKTREQKTILSPIAGTI----VYNQSFSSSNYAQQSQP-LMKIVPHSKLTYIRAKVTPKQ 338
           +  ++  T+ SPIAG I    +  +        + ++  L++I   S        +  + 
Sbjct: 837 KTLKQNLTLRSPIAGVILTNDLDLRQNQE---LKPTEDFLLEIAELSS-LTATVDIKEED 892

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           +++V+     T R       + + + A +++I P I  Q    Q Q   +V + +     
Sbjct: 893 LEYVENHKPVTFRP---RQAKLRPYTATVQRILPQI--QHEPSQPQPIAQVEIVVD---- 943

Query: 399 SDNNIELRNG 408
            +++ +L  G
Sbjct: 944 -NSDGKLYPG 952


>gi|238764500|ref|ZP_04625448.1| HlyD family secretion protein [Yersinia kristensenii ATCC 33638]
 gi|238697312|gb|EEP90081.1| HlyD family secretion protein [Yersinia kristensenii ATCC 33638]
          Length = 147

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 3/120 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            L+ N    L    LL I G IG + W+ L P++  ++  G I+  +N   ++    G I
Sbjct: 19  PLQVNSGRYLSLGGLLVIGGFIGSLLWAGLAPLDKGIAVMGHIVVAENRKLVQPLQGGRI 78

Query: 68  KKFQVENGSQILQGTPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           ++  +  G  + +G  L+T +D       D +  + +S       +  E+  L  +    
Sbjct: 79  QQLHIAEGDDVTEGQLLITLDDTAMRSHRDNLQHQYLSALAQESRLTAEQHELPTITFPR 138


>gi|186683807|ref|YP_001867003.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186466259|gb|ACC82060.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 482

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 53/452 (11%), Positives = 129/452 (28%), Gaps = 67/452 (14%)

Query: 10  KRNHPASLKRMTL---LSIIGIIGLITWSILL---PIEISVSSSGEILNEDNVVEIKSPF 63
           KR  P  L    +     + G  G   W         + +  +        N+ ++ S  
Sbjct: 49  KRKKPTGLILAGIGVGAIVAGTFGYNYWQYASTHQETDNATVA-------GNIHQVSSRI 101

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G + +  V +   +  G  L+  +  +    +   + +++N R      ++ +   +  
Sbjct: 102 PGTVSQVLVNDNQLVQPGQLLVKLDPRDYESKVQQAQAALENARGQAQAAQANIALTSQT 161

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                   +      +  +    +                +      +R         + 
Sbjct: 162 TTGKTTQAQGDVSGAVAAISTAQAAV--------QEAQAGIPAAQAEVRLAEAGIPAAQA 213

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +   A L + Q D      L++  A+++  L+  +     +T +    +   +     
Sbjct: 214 QVAQANANLENAQADYNRYNELYKNGAIARQQLDAAKAAFNVATAQRNAAVQGVEQAQAK 273

Query: 244 INELY---DEANLEFANYLKEI---------------------------SRDLEQNQRTF 273
           +        +A  + A   + +                               E  +   
Sbjct: 274 LASARVGVAKAQSQLAQAQENVTNAQAKLAASKGGLQQATAGGQDTTVKRSQYEAAKAAI 333

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A   + L   +       + +P AG +   ++    N      PLM IV      ++ A 
Sbjct: 334 AQSEASLKDAQLQLSYANVTAPSAGRV-GRKNVEVGNRVAVGTPLMAIV--DNEYWVIAN 390

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEV 389
               Q++ ++ G  A ++   +       F   +E + P    Q      +  T  + +V
Sbjct: 391 FKETQLEKMRPGEMAEIKLDAFPHHT---FVGRVESLSPASGAQFALLPPDNATGNFTKV 447

Query: 390 ILKI------TDLAFSDNNIELRNGFPAEVLF 415
           + +I         +       +  G  AEV  
Sbjct: 448 VQRIPVKVVFDQKSIQGYESRITPGMSAEVAV 479


>gi|261339937|ref|ZP_05967795.1| colicin V secretion protein CvaA [Enterobacter cancerogenus ATCC
           35316]
 gi|288317851|gb|EFC56789.1| colicin V secretion protein CvaA [Enterobacter cancerogenus ATCC
           35316]
          Length = 425

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 51/434 (11%), Positives = 140/434 (32%), Gaps = 60/434 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            +  +  +S   +  L+T+ I       ++  GEI      V + S   G + K  ++ G
Sbjct: 25  PVWLVMAMSAFFLTCLMTFIISGSYTRRINVQGEISTWPRPVNVYSGVQGFVVKQFIKEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G  +   +  ++T    +     +++   +    + +  +    +   +  E ++
Sbjct: 85  DSIRKGEAVYQIDVSKSTRSGVVSDTQRQDIENQLARIGNMIAGIRKSKETTLRTLEKQK 144

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q  +   +  S   +                                        ++  
Sbjct: 145 LQYSEAFRRSASIVRRA------------------------------------EEGINMM 168

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++++   +   ++  ++++ L  Q  + Y+    L     +    +  I  L  +   + 
Sbjct: 169 KQNMENYRQYQKQGLITKDQLTSQVALYYQQQNSLLNLSTQNAQNILQITSLDSQIQTQA 228

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A +   I +   Q       E+ K  +         + +   G I      +        
Sbjct: 229 AEFDNRIYQMELQRY-----ELQKERVTTDAGGDVIVRALSDGKIDSLSV-TPGQMVSAG 282

Query: 316 QPLMKIVPHS---KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             L++IVP +       +   V    + ++  G +  VR+  +   +  +F A +  +  
Sbjct: 283 DSLLQIVPQNIKSHDLIL--WVPNDALPYISVGDSVNVRYEAFPAEKFGQFAAKVMLVSR 340

Query: 373 I-----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKN 419
                        + ++    +  YY+V+++    + +    ++ L NG  A+     + 
Sbjct: 341 TPASSQEMQTYAGAPRNTAGGSIPYYKVVVRPERQSIAYMGRDLPLENGMKAQSTLFLEK 400

Query: 420 TTLAQEIIHPITDN 433
             + Q ++ P  D 
Sbjct: 401 RRIYQWMLSPFYDM 414


>gi|88803166|ref|ZP_01118692.1| hypothetical protein PI23P_11277 [Polaribacter irgensii 23-P]
 gi|88780732|gb|EAR11911.1| hypothetical protein PI23P_11277 [Polaribacter irgensii 23-P]
          Length = 455

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 137/398 (34%), Gaps = 59/398 (14%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILN---EDNVVEIKSPFSGIIKKFQVENG 75
                +++ I+  + W        ++S +G +     E    +I+S   G I+++ V  G
Sbjct: 37  LFAFAAMLLIVLFLPW------TQNISGNGIVTTLTLEQRPQDIQSQIPGRIEQWFVREG 90

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +L   ++++    D     I+     I+ +KSA+D  + K   L++   +  
Sbjct: 91  DFVEKGDTILRISEVKSDYFDDRL---IERTNDQINAKKSAVDAYDEKVAALQRQTIALT 147

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E+      K   T +K+    +     S+  +                     +  +   
Sbjct: 148 EE---RALKTAQTKNKLLQAKLKVQSDSIGFEAA-------------------KTNIKIA 185

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEAN 252
           ++     + L ++   +  D+ ++   + ++   L     ++   KN + +         
Sbjct: 186 ERQYLRTETLQKEGIFAVKDVEEKRLKLQETQANLITKENSVLAAKNEVLNAQLELSRIA 245

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-------SPIAGTIVYNQS 305
             FA+ + +   D+   + +  D   +++ LE +     +        +P  G I     
Sbjct: 246 ASFADKISKAQSDMYTAKSSGYDAKVQVSKLENSNSNYKVRSSLLYITAPQNGFINKAIK 305

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR--------FPHYAD 357
                  ++ + L+ I+P      +   V P  +  +       V+        F  + +
Sbjct: 306 GGIGGAFKEGESLVGIMPEKYDLAVETFVRPIDLPLLHLDEKVRVQFDGWPAIIFSGWPN 365

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           +    + A +  I+  IS           Y V+L   +
Sbjct: 366 VSYGTYGARVIAIERFISDNGK-------YRVLLAPDE 396


>gi|307822595|ref|ZP_07652826.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
 gi|307736199|gb|EFO07045.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
          Length = 369

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 64/406 (15%), Positives = 128/406 (31%), Gaps = 68/406 (16%)

Query: 20  MTLLSIIGIIGLITW--SILLPI--EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           + LL    +I L+ W  +   P   E  V ++G I  E +   +   + G + +     G
Sbjct: 11  IALLISGLLIALVVWWLAWREPPFPEGLVQANGRI--EGDHYTVAGKWPGRVTELLSREG 68

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L+  +D++T   +D  K ++  ++  +   +++L            A   + 
Sbjct: 69  DPVEKGQILVKLDDVQTRARLDQAKSAVDVIKAKLTAAQTSL------------AIFKKN 116

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             L     K   T +  F    ++                                    
Sbjct: 117 IPLKVETAKAGVTHANAFQASANATEEQ-------------------------------T 145

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +KD      L ++  V +    Q E     +  +        +  +    +L  EA L++
Sbjct: 146 RKDAERFSELLKRQTVDKQRSEQAELSWKVAHAQ----RTTAQAAVVQAEKLLAEAGLDW 201

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                    ++           + L   +   +   I +P  G I   +   +       
Sbjct: 202 DQVKAR-EDEVAALTAQVTQAEAALAEAQSMLDDLVIRAPATGMITT-RVVDTGEVVAAG 259

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            PL  IV      Y++  V   +I  V+ G  A +    + D   K F A +  I     
Sbjct: 260 SPLFDIV-DLDRLYLKVYVPEIEIGKVRLGLPARIYTDAFPD---KPFPATLRYIASQAE 315

Query: 376 QQDNNLQTQE-----YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                +QT +      Y V L + +    + +  L  G PA+ +  
Sbjct: 316 FTPKEVQTADERIKLVYAVKLYLDE----NPDHRLTPGLPADAVIR 357


>gi|47846209|emb|CAF25007.1| putative accessory transporter protein [Lactobacillus sakei]
          Length = 458

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 59/446 (13%), Positives = 162/446 (36%), Gaps = 37/446 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           + + N+ ++L  M ++ ++ ++ +   S     EI++   G++  +  +  +++  + I+
Sbjct: 13  SARFNNFSTLLIMPIVILLFLVCVF--SFFCKREITIEGQGDLTTDKQIPILQASANSIL 70

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           K+  ++ G  + +G  LL +++ +  +   L      NL   I + ++  + +    +  
Sbjct: 71  KQNYLKEGKFVKKGQTLLVYKNTKNQNQKQLLTQQQDNLNRQITSLETLKNSIKANQNQF 130

Query: 128 EKAFESREEQL----LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            K  +   + L    LD    Y      + +  ++S  +  K+     ++I  N+ +L +
Sbjct: 131 VKNDQFGYQDLLMGYLDQRQIYLIENQMLTDKSVTSTDKQKKLAAIADKTIKRNQTNLND 190

Query: 184 KSSLLRA---------------LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             +L  A               L  ++Q  +    +  EKN+   + L   ++ +     
Sbjct: 191 YQTLYAAVSTDKAYSKEGKYYYLYQNYQSKIKETTDKAEKNSFKADILATTQQQIDNLQD 250

Query: 229 ELRENIHEQKNMLR------HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            +    +++  +          +   ++  +  A   +  +  L + +++ ++  + +  
Sbjct: 251 SIENAENQKAGLEEFNDTSFSTSANNEKLAMLQAQQTQSTNEQLVKAKQSLSEIQTTIKQ 310

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQI 339
           +     +  + +P +G +  +  +    Y      + ++ P         I A +    I
Sbjct: 311 ITSDSSEYIVRAPKSGILHIDDHYRGVKYTNIGTNMAQLYPVLTEQNKIKIEAYIPVDDI 370

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             VK+     ++          K   I  +I  I        Q   YY V   I+ +  +
Sbjct: 371 SSVKQNQHLRLKIT----RNVPKPIIIEGRIKQISVSPTQTNQG-SYYTVTA-ISSIPSA 424

Query: 400 DNNIELRNGFPAEVLFTAKNTTLAQE 425
              + +  G   +V      TT    
Sbjct: 425 TKKL-IHYGMTGKVSVITGKTTFFNY 449


>gi|332712024|ref|ZP_08431954.1| RND family efflux transporter, MFP subunit [Lyngbya majuscula 3L]
 gi|332349352|gb|EGJ28962.1| RND family efflux transporter, MFP subunit [Lyngbya majuscula 3L]
          Length = 562

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 54/384 (14%), Positives = 127/384 (33%), Gaps = 56/384 (14%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +   + +          IK+  V  G  +  G  ++  ++      +   + ++  
Sbjct: 151 AIGSVAAFEEIRVKSQATGLQIKQVLVREGEFVKAGQVMVRLDNAVLQAQLAQAQAAVAQ 210

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
               +   K+                                T S+      + + ++  
Sbjct: 211 AEARLAELKAG-------------------------------TRSEEKAQARARLDQAQA 239

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                  SI       + + +   A LS  ++     + L  + A+SQ+  N+ E   + 
Sbjct: 240 RLRQAQASIPRQIDQAKARVASAVAQLSLAKRRFESQEKLIAEGAISQDRYNEVESQYFS 299

Query: 226 STL---ELRENIHEQKNM----LRHINELYDEANLEFANYLKEISRD-LEQNQRTFADEM 277
           +     E ++ + + +N     +  +     EA  +    L     + + Q Q   A E 
Sbjct: 300 AQANLSEAQQRLEQTRNTNSPEIAQLEAAVVEAQQQLQQRLAGSRPEVIAQAQAQLAREK 359

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +++ ++        +++P++G +    +    +    S+ L  I+       +  +V   
Sbjct: 360 AQVQLVMAQLNDTQVVAPVSGKVATRNAR-VGDITSSSETLFTII-EKGRLELLLRVPET 417

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           Q+  ++ G    +      D R  K    + +IDPI+ QQ          + ++K+    
Sbjct: 418 QLSQIQIGQPVEI--SSKGDSRL-KLSGTVREIDPIVDQQSR--------QALVKVD--- 463

Query: 398 FSDNNIELRNGFPAEVLFTAKNTT 421
              N+  LR G   +   T   TT
Sbjct: 464 -LPNSGTLRPGMFLQGSITTSATT 486


>gi|186683429|ref|YP_001866625.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186465881|gb|ACC81682.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
          Length = 486

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 60/394 (15%), Positives = 132/394 (33%), Gaps = 41/394 (10%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S   +  L  + I+ L  WSI   I I+V   G ++    VV ++S FSG +   +++
Sbjct: 37  PKSWIPLATLGSLSIVAL-VWSIFGRIPITVDGVGVLVYPSTVVPLQSRFSGQLVALKIK 95

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +G  L T + ++  + + L +   K L+         +  L  K    E     
Sbjct: 96  QGDVVKKGDILATLDQVDLREQLQLVRGKFKQLQMQ----NHEVKLLQIKRRDGEIKTIQ 151

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            + + LD   +     + +                  + SI + R +   +   L+ L+ 
Sbjct: 152 EQRETLDQRLQMMQNLTPLLKD-------------KGLISIQVERQNQTQRLQTLQGLIP 198

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM------------- 240
           +++  L   + LFE+ A+  + L Q  +    +   + E   + K +             
Sbjct: 199 TYKMRLKNRQMLFEEGAIPDDTLLQSRQEYLDNMASIEEVKSQLKQLDVKEAEALQQYLS 258

Query: 241 ----LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE-QKTILSP 295
               +++I         +  +  ++        ++   D    +T LE+       I+S 
Sbjct: 259 NLNEIKNIKAQLQSLKSQKTSSDQQNLESSTSRKKEIQDVQRDITRLEQQINTNSQIVSQ 318

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TYIRAKVTPKQIQHVKKGYTATVRFP 353
            +G I+           Q+   +  I   ++               + ++ G    +   
Sbjct: 319 HSGRILEVTIN-PGQVIQEGTRIANINTENRPEKLVGVTYFPVGDGKKIQSGMKIQITPQ 377

Query: 354 HYADIREKKFKAIIEKID--PIISQQDNNLQTQE 385
                R       +  +   PI ++   N+    
Sbjct: 378 TVKRERFGGIVGTVTDVSPFPITTEAAANVVGNP 411


>gi|167948447|ref|ZP_02535521.1| Membrane-fusion protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 149

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 51/131 (38%), Gaps = 1/131 (0%)

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +++   +     +T+ +P+ G +      +       +Q LM+IVP ++   + A +  K
Sbjct: 5   NEIIKAQVRNYAQTLTAPVDGVVQQLAIHTIGAIVTPAQELMRIVPSAEQLEVEALIENK 64

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I  V++G  A V+   +   +     A +  I       +      +   V+L+ T + 
Sbjct: 65  DIGFVEEGQRAEVKIDAFPFTKYGTIDAELTDISNDAVMDETKGLVFK-ARVVLEKTTIQ 123

Query: 398 FSDNNIELRNG 408
                + L  G
Sbjct: 124 VGKRLVRLTPG 134


>gi|99034201|ref|ZP_01314277.1| hypothetical protein Wendoof_01000929 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 129

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 43/129 (33%), Gaps = 19/129 (14%)

Query: 326 KLTYIRAKVTPKQIQHVK---------------KGYTATVRFPHYADIREKKFKAIIEKI 370
               I AK+  + I+ V                +G    VR   Y+  R      I+  I
Sbjct: 1   DDLIIDAKIQTRNIEEVLSAQKKDSNIVSIDGLEGLKVKVRLSAYSARRLSLISGIVSHI 60

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
            P         +   YY V + I     +   N+ L  G PAEV    ++ TL   +  P
Sbjct: 61  SPDALDD---PRLGRYYSVRVVIPKPELAQFKNVYLYPGMPAEVYIVTQSRTLLSFLFTP 117

Query: 430 ITDNWPKIF 438
           I     + F
Sbjct: 118 IIATVDRSF 126


>gi|330860680|emb|CBX70974.1| hypothetical protein YEW_EK18770 [Yersinia enterocolitica W22703]
          Length = 393

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 128/400 (32%), Gaps = 51/400 (12%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +      +G +++   V  I +P  GII     E G  +  G  +        T+    +
Sbjct: 21  LSQKARLAGSVVHHPAVARIIAPRDGIIVSSLAEEGKTVRAGEVIYVVNMETQTEFGGTR 80

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +   L+    T +  +   +   D+                                 
Sbjct: 81  HETAAALKLQKATIEREIKLKSEAADI--------------------------------- 107

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                   L  + +  + +  +++         S   + +   K L  +    + +   +
Sbjct: 108 ---EQNFLLLSLENKEIEQQKMDDLIGKSTQQTSWLLEKVQHFKELVRQGIALETEHMSR 164

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
               Y + ++L     E+  +   I         + A    EI   LE   R  A     
Sbjct: 165 RSEYYSAAVQLENYKREKVRLQGEIVN----IKAQLAAIHSEIEVSLEILHRQTARLDQD 220

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L  +E+ RE   I SPI GT+      +  N  + +Q L  +VP S    +    T   I
Sbjct: 221 LISIEEQRE-LQITSPIDGTLTGITGLA-GNTIRAAQELASVVPTSGQVEVEIFATADTI 278

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-------IISQQDNNLQTQEYYEVILK 392
             +++G    +RF  Y      ++  I+  I          IS++  +   + Y++V + 
Sbjct: 279 GELREGQAVRLRFDAYPYQWFGQYDGIVRSISTTSVEQRLDISEKQAHQPQRHYFQVRII 338

Query: 393 ITDLA--FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             + A   +     LR G   +     +   L + ++ P+
Sbjct: 339 PKNNAVVMAGETYPLRPGIGVQTDVFIRKRPLYEWLLLPL 378


>gi|319952600|ref|YP_004163867.1| biotin/lipoyl attachment domain-containing protein [Cellulophaga
           algicola DSM 14237]
 gi|319421260|gb|ADV48369.1| biotin/lipoyl attachment domain-containing protein [Cellulophaga
           algicola DSM 14237]
          Length = 449

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 55/381 (14%), Positives = 130/381 (34%), Gaps = 37/381 (9%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGI 66
           KR++    + +   ++ G I L      LP   +V   G +     +     I+SP  G 
Sbjct: 27  KRHYKYFNRFLIGSALFGFIVL-----FLPWTQNVRGKGSLTSLKPDQRPQTIQSPIPGR 81

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+K+ V+ G  + +G  +L   +I+  +  D K V           E++       +  V
Sbjct: 82  IEKWYVQEGDFVNKGDTILFISEIK-NEYFDPKLV-----------ERTGDQIKAKERSV 129

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +  ++E + + L + +G   +          + + ++     +    +     +LE    
Sbjct: 130 V--SYEGKVKALNNQIGALATERGLKLQQAKNKLLQAKLKVQSDSIDLMAAATNLEISER 187

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRH 243
                +   ++ L  + ++ EK    +  L + +  +     +L   R  I      +  
Sbjct: 188 QYDRTVLLQEEGLKAVTDVEEK----RLKLQETQAKLISQQNKLLASRNEILNASVAISS 243

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +   Y +   +  + +         +Q       ++ T  E   +   I +P +G I   
Sbjct: 244 VQTAYTDKISKAQSDMYSAQSGQYDSQAQVTKLENQFTNYEMRNDMYYIKAPQSGYINKA 303

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR--------FPHY 355
                    ++   L+ I+P      +   V P  +  + KG    +         F  +
Sbjct: 304 IQAGIGETFKEGDKLVGIMPSVYDKAVEMFVAPLDLPLIHKGEKVRIEFDGWPAIVFSGW 363

Query: 356 ADIREKKFKAIIEKIDPIISQ 376
            +     +  ++  ++  IS 
Sbjct: 364 PNASYGTYGGVVVAVETFISP 384


>gi|295101028|emb|CBK98573.1| Multidrug resistance efflux pump [Faecalibacterium prausnitzii
           L2-6]
          Length = 370

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 90/276 (32%), Gaps = 28/276 (10%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-----KNAVSQNDLNQQ---------- 219
           ++   DL+ +   L++ L  ++K  +  + L +     KN  S+ D++ Q          
Sbjct: 94  HIKSTDLDMQQDSLQSQLDIYKKQKSQYEKLVKSIQDDKNYFSETDIDDQPYYYQYETYK 153

Query: 220 ----ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
               ++    S  +      EQ   L   N+   E    + + L+ IS  L   Q    +
Sbjct: 154 SQVAQKAFDASPYQAAGYSDEQIKALMEQNQ--SEVEALYYSTLQSISASLTSVQSNIDN 211

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             S++  L        I +P +G I  +  +          PL  +   +    + A VT
Sbjct: 212 LQSQMDSLNTGANDYYIYAPTSGVIHMDTPYKVGMVLSAGTPLATVASENSDLEVVAYVT 271

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
                 +  G    +     ++         +  ID  ++       +  YY++ +    
Sbjct: 272 LSDRPLLHVGAPCKIAITGLSEYSYGTLTGTVTSIDSDVT----ASSSGSYYKMTITPDS 327

Query: 396 LAF---SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                 S + ++L NG            T  +  + 
Sbjct: 328 TYVISNSGDKVDLSNGMSVTARVEYDKLTYFEYAME 363



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 24/184 (13%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           L+ WS          SSG +    N   I S +SG I +  +  GS + +G  +   +  
Sbjct: 40  LVVWSTKNYRTYVSQSSGSVQAA-NKTYIMSSYSGSITELNIAEGSYVNEGDLIAHIKST 98

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN----------------------KYDVLE 128
           +     D  +  +   +      +  +  + +                      K  V +
Sbjct: 99  DLDMQQDSLQSQLDIYKKQKSQYEKLVKSIQDDKNYFSETDIDDQPYYYQYETYKSQVAQ 158

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL-TRMRSIYLNRLDLENKSSL 187
           KAF++   Q   +  +      +     + ++Y S    +   + S+  N  +L+++   
Sbjct: 159 KAFDASPYQAAGYSDEQIKALMEQNQSEVEALYYSTLQSISASLTSVQSNIDNLQSQMDS 218

Query: 188 LRAL 191
           L   
Sbjct: 219 LNTG 222


>gi|192358885|ref|YP_001984058.1| putative toxin secretion, membrane fusion protein [Cellvibrio
           japonicus Ueda107]
 gi|190685050|gb|ACE82728.1| putative toxin secretion, membrane fusion protein [Cellvibrio
           japonicus Ueda107]
          Length = 418

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 69/393 (17%), Positives = 131/393 (33%), Gaps = 51/393 (12%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
              W  L         SG I   D V+++ +    +I K  V  G+Q+ +G PL+ F   
Sbjct: 44  FFLW--LGKYNRKEIVSGYIDPVDGVIKVIADEPAVIDKILVSEGAQVKKGEPLIVFN-- 99

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                                        L+NK  V+     +  ++ +D + +     +
Sbjct: 100 ------------------------RGKSTLSNK--VVSDEIVTSLQKEIDLVDQLILAVN 133

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +  +  I     ++K     ++S+ L +  + +   L+    +   K             
Sbjct: 134 QKSDASILQTEEAIKSHYAAIKSLSLEQTIINDAIGLIERKKNRLLKLKK-------SGF 186

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VS+ D+   +       +E+     E  N+   I+E     ++E  N+  EI   L  NQ
Sbjct: 187 VSEIDVENVDLEYVNLAMEIARVKREITNLENLISERRRALDVESQNWKVEI---LNLNQ 243

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           R        +          T+ SPI G I  N   ++        P++ +         
Sbjct: 244 RKEGITKELINA--SVMNSYTVRSPIDGVI-DNVFENAGRQIFPGAPVLTVRKAHAEMIA 300

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNL--QTQEY 386
           R  V  K    +  G    +R   +   R       I +I   P+   Q        + +
Sbjct: 301 RLIVPVKSSGLISTGQKVFLRMDAFPYQRYGVISGTIRRISTSPMTPGQLEMPITVGESF 360

Query: 387 YEVILKITDLAFSDNN--IELRNGFP--AEVLF 415
           Y V +++ +    D N  + L+ G    AE++ 
Sbjct: 361 YVVDVELKNAQKKDGNAGLILKVGMTLKAEIII 393


>gi|186685134|ref|YP_001868330.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186467586|gb|ACC83387.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
          Length = 479

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 72/461 (15%), Positives = 150/461 (32%), Gaps = 41/461 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +   N       +TL ++  ++ +   WS+   I ++V+  G ++   +VVE ++P SG 
Sbjct: 24  DQAINVVKPQAWLTLSTMSFVVAVAGLWSVFGRIPLTVTGQGILIKPHHVVEFQAPSSGP 83

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC------HIDTEKSALDFL 120
           +   +V+ G  I QG  L   +       +  ++V ++ L+        +         +
Sbjct: 84  LLTLKVKAGDIIKQGDVLGIIDQSALKQQLQQEQVKLQQLQTQNQETDRLQKLLIDQQII 143

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                 ++     R EQ    L              I+S  + +   L  ++    NR  
Sbjct: 144 TLGQQRMDLENNLRREQGAPKLRDQTQRAIAQKRQSINSRKQQINYLLKTLKGRVDNRRH 203

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L  +  + + +L   +++    ++      V   DL  QE    +  LE    I E K  
Sbjct: 204 LFEQHVISQDMLVQAEQEYFNTQSELSDIDVQLKDLEIQETTTQREYLENLNRIDEIKTK 263

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           ++ +N    + + +      + +  + + +R  A    +L+      ++  I+S   G I
Sbjct: 264 IKDLNTQNTKLHEQDLKQSIDKTNKIREVKRRIAQLELQLS------QESRIISKYNGHI 317

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPH--SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           +                L  I     +           K  + +K G    V        
Sbjct: 318 LEVSVV-PGQMMNPGTRLGSIEAEEANSKLMSLVYFANKDGKQIKPGMAVQVTPSFAKRE 376

Query: 359 REKKFKAIIEKID--PIISQQD----------------NNLQTQEYYEVILKITDLA--- 397
           RE      I  I   P+ +Q                     Q Q + ++    T ++   
Sbjct: 377 REGGIVGTIADISSFPVTTQDITAIVGNKEMAASLAGKGEGQVQAFVQLQENPTSVSGYK 436

Query: 398 ---FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
                   +++ +G    V            II P+  +W 
Sbjct: 437 WSSSDGPALKISSGTTTSVQVKVGEKAPISYII-PMLRSWT 476


>gi|238757422|ref|ZP_04618608.1| Auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia aldovae ATCC 35236]
 gi|238704461|gb|EEP96992.1| Auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia aldovae ATCC 35236]
          Length = 373

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 63/403 (15%), Positives = 131/403 (32%), Gaps = 61/403 (15%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           GEI      + I S   G I +  V  G ++++G  L   +  + TD             
Sbjct: 5   GEITTLPRPINIFSSHQGFITQSLVSVGDEVVRGQALYQIDVSKVTD------------- 51

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                  S +   NN++ +        E QL+                  +   R +K +
Sbjct: 52  -------SGVVSKNNQHAI--------ERQLVQVKNIIKKLQGNKLATLSNIQDRKIKYE 96

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           +   +S  L +   +N        + S ++     +    +  ++Q  +N Q    Y+  
Sbjct: 97  IAYEKSSQLVKNSQDN--------VESMRRMANDYREYLRQGLITQEQVNNQTYSYYQQQ 148

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                   +       I  L  E     A++  +IS    Q +  + D   +L       
Sbjct: 149 SAAHNLYGQNMQEALQIANLESEIVTRAADFDNQIS----QYELQYGDLRRQL-AETDAT 203

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL---TYIRAKVTPKQIQHVKK 344
               I +P+ G I      ++         L +++P ++      +   +    I ++  
Sbjct: 204 GTLVINAPVDGRIESLSV-TTGQMVNIGDSLAQLIPGTEPQYYLVL--WLPNGAIPYITV 260

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN------------NLQTQEYYEVILK 392
           G +  VR+  +   +  +F   IE +  + +                NL  + YY++++ 
Sbjct: 261 GNSVNVRYEAFPFEKFGQFPGRIETVSSVPASTQEMASYNSTPRYHSNLSAESYYKMLVV 320

Query: 393 ITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           +    F   +  + L  G  A+     +   L Q +  P  D 
Sbjct: 321 LDQTQFHYQEKTLRLTGGMKAQSTLFLEKRPLYQWMFSPFYDM 363


>gi|17227941|ref|NP_484489.1| hypothetical protein alr0445 [Nostoc sp. PCC 7120]
 gi|17129790|dbj|BAB72403.1| alr0445 [Nostoc sp. PCC 7120]
          Length = 520

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 60/436 (13%), Positives = 145/436 (33%), Gaps = 67/436 (15%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEIS----------------------VSSSGEILN 52
           A +  ++ L ++GI+G I ++I   I +                       VS++G +  
Sbjct: 24  AKINWLSWLIVLGIVGGIGYAIYYQITVVPRQQARSRVLTQAVERQTLPITVSANGTVKP 83

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E +V  +    SGI+K+  V+ G  + QG  L   +D      +   +  +   + ++  
Sbjct: 84  ERSV-NLSPKNSGILKQLLVKEGDVVKQGQVLAYMDDSNLRGQLISAQGQLAQAQANLQK 142

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            ++                 +R + +     +     + +      +  + +     R++
Sbjct: 143 VQAG----------------NRPQDIGQSQAQLDEALANLRKLEAGNRPQDIAQAQARLK 186

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-QERIVYKSTLELR 231
           S   +    E+     + L +     L ++     +   +Q  +N+ Q+ +  +     +
Sbjct: 187 SAQASLTQTEDDLRRNQQLYNDGAIALQVVNQKRTERDSAQAQVNEAQQALALQQAGSRQ 246

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E+I + +  +R   E    A L+  N  ++I       +         L   +       
Sbjct: 247 EDIEQARATVRQRQEAL--ALLKAGNRREDIDA----ARAQVTSARGSLQNTQAQINDTV 300

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQ--------PLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           + +P  G +   +      +   +             I+  +    + A ++   I  ++
Sbjct: 301 LRAPFDGIVTQ-KYADPGAFVTPTTSGSAVSSATSSSILALASRNEVVANLSESNIAKIR 359

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G   T+    Y       F+  + +I    + + N       ++V + +TD        
Sbjct: 360 LGQKVTITADAYPGRT---FEGKVSQIAAQATVEQNVTS----FQVKVSLTDPQRL---- 408

Query: 404 ELRNGFPAEVLFTAKN 419
            LR+G      F A  
Sbjct: 409 -LRSGMNVSAEFQAGQ 423


>gi|254416173|ref|ZP_05029928.1| hypothetical protein MC7420_7595 [Microcoleus chthonoplastes PCC
           7420]
 gi|196177106|gb|EDX72115.1| hypothetical protein MC7420_7595 [Microcoleus chthonoplastes PCC
           7420]
          Length = 267

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 91/269 (33%), Gaps = 26/269 (9%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +      LE + + + A     ++  + +     +   +   LN  E +V  +  ++ + 
Sbjct: 1   MTQQEQALEAQKATILAQKQEIERLSSGVDAAQARRKGALAALNPSEAMVTMAKEKIAQE 60

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               K  L  +N+  ++       +  E+S  L +NQ        +L  +E   +   I 
Sbjct: 61  RATGKASLSRLNQEREQ----LIQHRGELSNQLSRNQ-------DELQQIETELQNTMIR 109

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +  +G I      +     +    + +I P +    I+A V+ + I  V+ G    +R  
Sbjct: 110 ASASGIIQQLHLRNVQQVVRAGDAIAQISPSAAPLVIKAFVSSQDISQVEMGQRVQMRVS 169

Query: 354 HYADIREKKFKAIIEKIDPII-------------SQQDNNLQTQEYYEVILKIT--DLAF 398
                        +  I P +             +Q      T  +YEV ++     L+ 
Sbjct: 170 ACPYPDYGTLPGTVTAISPDVTMPTLTPQAIASSTQASTTSATHAFYEVTIQPGLFQLSE 229

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEII 427
            +    +++G        A   T+   I+
Sbjct: 230 GERPCVIQSGMEGRADIIATEETVLNLIL 258


>gi|288937559|ref|YP_003441618.1| secretion protein HlyD [Klebsiella variicola At-22]
 gi|288892268|gb|ADC60586.1| secretion protein HlyD family protein [Klebsiella variicola At-22]
          Length = 428

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 66/443 (14%), Positives = 145/443 (32%), Gaps = 57/443 (12%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           HH+  K L          + LLS   +  LI  +I       +   GE++   + V + +
Sbjct: 16  HHWKGKALLLAG-LPAWLIVLLSFSFLAILIATTIFCSFTQRIDVKGEVITLPHSVNVYA 74

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           P  G +     + G  + +G PL   +    T   ++    I+ +           + + 
Sbjct: 75  PQQGFVISQYAKVGDIVNKGQPLYEIDISRNTTTGNVSAAQIEVIN----------EKIA 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           N  D++ K   ++EE  L                              ++++I  +  + 
Sbjct: 125 NAEDIISKLSHNKEETSLSLD--------------------------KQLKTINDSLKET 158

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
               +  +  L     +L           ++++  N Q  + ++     +  + ++  + 
Sbjct: 159 NQMLANAQTGLKKMHDNLASYDKYLSDGLITKDQYNYQHSLYFQQQSTYQSLVSQKMQLE 218

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             + +L  +   + A++  +IS      +    D  ++L           I +   G I 
Sbjct: 219 SQVTQLNSDKITKTADFDNQISSQ----ENQINDYKNQLVE-SSANGNIIIKATTEGRIE 273

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                +      +   L +I P      Y+   +    I +VK G    +R+  +   + 
Sbjct: 274 SLAV-TKGQMVDKGSSLAQIKPTGDIEYYLILWLPNNSIPYVKPGDVINIRYDAFPADKF 332

Query: 361 KKFKAIIEKIDPIIS-----------QQDNNLQTQEYYEVILKITDLAFS--DNNIELRN 407
            +F   I  I  + +               N Q    Y+ I+KI +  F      + L N
Sbjct: 333 GQFPGKILSISSVPTSRQEMSEYTNVTDGTNQQELALYKTIVKIENKTFEYNGKTLSLSN 392

Query: 408 GFPAEVLFTAKNTTLAQEIIHPI 430
           G  A+ +   +   L   +  P+
Sbjct: 393 GLKAQAVVFLEERPLYMWMFTPV 415


>gi|124021844|ref|YP_001016151.1| hypothetical protein P9303_01311 [Prochlorococcus marinus str. MIT
           9303]
 gi|123962130|gb|ABM76886.1| Hypothetical protein P9303_01311 [Prochlorococcus marinus str. MIT
           9303]
          Length = 347

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/352 (13%), Positives = 111/352 (31%), Gaps = 36/352 (10%)

Query: 81  GTP-LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           G   LL+   +  T L       +  +             +  K  +  +  +   +   
Sbjct: 9   GQIFLLSLVGLGATALATAYIYRLDEVITVQGRLVPQSGGVAIKSPLNGQLADVLVKNGQ 68

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                       V +  +     S K+KL + R +    L+   +    +  +    K L
Sbjct: 69  RVEKDQILLIFDVKDAKLREQTISQKLKLEQKR-LKDQLLNNTQQQETTKRYILLTDKIL 127

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             ++ L    A+S+  + ++   +     +L++   +++ ++                  
Sbjct: 128 GKLRPLEASGAISELQVLKEANQLETQRDQLKQQETQRETII------------------ 169

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                   ++     D   +L  +      + + +PI+G +   +  +    AQ+++ L+
Sbjct: 170 -------NESLSRNTDLQGQLNQMRNQLRYEFVRAPISGVVFDLEPDNDRYVAQKAEELV 222

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           KIVP          +T K I  V+ G +  VR   +      +    +  I         
Sbjct: 223 KIVPSGG-LRGEVNITNKDIGFVQTGQSVKVRVDSFPYTEYGQISGEVSHIGADA---LP 278

Query: 380 NLQTQEYYEVILKITDL-----AFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
             Q   +Y   + +        A  D  I+L+ G         ++  L + +
Sbjct: 279 PTQLIPFYHFPVDLKLESSELKARDDTPIKLQAGMTITTTLKLRDRRLIELL 330



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 76/186 (40%), Gaps = 7/186 (3%)

Query: 15  ASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           +   ++ LLS++G+    +  + +  ++  ++  G ++ +   V IKSP +G +    V+
Sbjct: 6   SKWGQIFLLSLVGLGATALATAYIYRLDEVITVQGRLVPQSGGVAIKSPLNGQLADVLVK 65

Query: 74  NGSQILQGTPLLTFE--DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           NG ++ +   LL F+  D +  +    +K+ ++  R       +       K  +L    
Sbjct: 66  NGQRVEKDQILLIFDVKDAKLREQTISQKLKLEQKRLKDQLLNNTQQQETTKRYILLTDK 125

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL----DLENKSSL 187
              + + L+  G             + +    LK + T+  +I    L    DL+ + + 
Sbjct: 126 ILGKLRPLEASGAISELQVLKEANQLETQRDQLKQQETQRETIINESLSRNTDLQGQLNQ 185

Query: 188 LRALLS 193
           +R  L 
Sbjct: 186 MRNQLR 191


>gi|331685971|ref|ZP_08386548.1| colicin V secretion protein CvaA [Escherichia coli H299]
 gi|331076924|gb|EGI48145.1| colicin V secretion protein CvaA [Escherichia coli H299]
          Length = 395

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 62/431 (14%), Positives = 139/431 (32%), Gaps = 56/431 (12%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
            L SI+ I   + + I+      V+ SGE+      V I S   G + +  V  G  I +
Sbjct: 1   MLGSIMFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQGFVVRQFVHEGQLIKK 60

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G P+   +  ++T    +     +++   +            + D +    E  ++  LD
Sbjct: 61  GDPVYLIDISKSTRNGIVTDNHRRDIENQLV-----------RVDNIISRLEESKKITLD 109

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            L K     +  F      + R+                            +   + ++ 
Sbjct: 110 TLEKQRLQYTDAFRRSSDIIQRA-------------------------EEGIKIMKNNME 144

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             +    K  ++++ L  Q  + Y+    L     + +     I  L  +   + A++  
Sbjct: 145 NYRYYQSKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQAADFDN 204

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
            I +   Q       E+ K  +      +  I +   G +      +          L++
Sbjct: 205 RIYQMELQRL-----ELQKELVNTDVEGEIIIRALSDGKVDSLSV-TVGQMVNTGDSLLQ 258

Query: 321 IVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI------ 373
           ++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I         
Sbjct: 259 VIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPSEKFGQFSATVKTISRTPASTQE 318

Query: 374 -----ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEI 426
                 + Q+    +  +Y+VI           +  + L NG  AE     +   + Q +
Sbjct: 319 MLTYKGAPQNTPGASVPWYKVIATPEKQIIRYDEKYLPLENGMKAESTLFLEKRRIYQWM 378

Query: 427 IHPITDNWPKI 437
           + P  D     
Sbjct: 379 LSPFYDMKHSA 389


>gi|300863553|ref|ZP_07108499.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300338420|emb|CBN53641.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 616

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 58/417 (13%), Positives = 141/417 (33%), Gaps = 53/417 (12%)

Query: 39  PIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            +   + ++G+I    N    +++P  G + +  V+ G ++ +G  L      E   L  
Sbjct: 78  RLATGIKTTGQIETLPNQKVKVQAPVDGTLVELLVKPGDRVSKGQILAILSSSELAQLRV 137

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                       +   K+ L      Y    +  E    ++ +   +  +   +      
Sbjct: 138 ESLSKRAEAEADLQQAKADLKLAKENYT---RQIEIASAEIAEVKIQLTAAQKQYSQDRE 194

Query: 158 SSVYRSLKMKLTR--MRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-------KNLFEK 208
               RS+    T    R I + + ++    + L      + +DL ++       + + E 
Sbjct: 195 LVEARSVVKVATENYQRQIEIAKAEIIRAETELAVAREQYDRDLELVNSGAIARRQMLES 254

Query: 209 NAV------------SQNDLNQQERIVYKSTLEL--------RENIHEQKNMLRHINELY 248
            A             S+ ++ Q E  + ++ ++L        +  + E K  L  +    
Sbjct: 255 RARRAEAQAAVAKAKSRPEVIQAESQIKQAEVDLPLRELRQSQGKVAELKAQLIKVLSRR 314

Query: 249 DEANLEFANYLKEISRDLEQNQRTFA-----DEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +    E      E + ++ Q++   +       + +L  L   R   T+++PI G +   
Sbjct: 315 EVLEAENQLKRAESAVEIAQSRIQLSNSAYEARLYQLGTLANDRGLVTVIAPIDGIVSD- 373

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  +     + ++  + I+ ++   +  A +  K +  VK+G    V+     +     F
Sbjct: 374 REITLGESVKAAEKPLMILLNNSAVFATANIYEKDLDLVKEGQEVRVKVASLPNRT---F 430

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              I  I   + ++   +  Q              ++ +  L+ G  AE+      T
Sbjct: 431 IGKIAIIGSAVQEETRAVSVQ-----------AELNNADGVLKPGLFAELEILTDQT 476


>gi|284038855|ref|YP_003388785.1| secretion protein HlyD [Spirosoma linguale DSM 74]
 gi|283818148|gb|ADB39986.1| secretion protein HlyD [Spirosoma linguale DSM 74]
          Length = 450

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 131/366 (35%), Gaps = 26/366 (7%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               + +L I   +  + W   +  E SV++   +  +D    +++  +G I++++++ G
Sbjct: 35  GRWMLIILFISLAVLFLPWQQNINGEGSVTA---LTPQDRPQTVQNAIAGRIERWKIQEG 91

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  LL   +I+         + +      +D ++ +L     K   L++   + +
Sbjct: 92  QSVRKGDTLLVISEIKDDYFDPNLPLRLDE---QLDAKRGSLTATGAKIAALDEQLSALQ 148

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             L   L    +   +     IS     + ++     ++       +   + L +L    
Sbjct: 149 TGLQVKLASARNKVRQSQFKVISDSTDLIAVQKNYQIALDRLDRFEKGYRNGLFSLTDLE 208

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            + L + ++   K    +N LN   + +  S L+L             I   Y E   + 
Sbjct: 209 TRRLKVQED-NAKVIAQENKLNVSRQELINSRLDLNT-----------IQADYQEKIAKT 256

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            +          + +   +   +K++ ++  R    + +P  G +V +         ++ 
Sbjct: 257 MSDRSSAVSYRAEAEGEISKIQNKISSVDVRRGLYVVRAPQDGFVVRSLKAGIGEMIKEG 316

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAII 367
           + +  + P   L  I   V P  +  +++G T          ++F  +  +    F   +
Sbjct: 317 ESIATLQPAHPLVAIELYVRPMDVPLIQRGRTVRLQFDGWPAIQFSGWPSVAVGTFGGEV 376

Query: 368 EKIDPI 373
             ID +
Sbjct: 377 AVIDAV 382


>gi|296122276|ref|YP_003630054.1| secretion protein HlyD [Planctomyces limnophilus DSM 3776]
 gi|296014616|gb|ADG67855.1| secretion protein HlyD [Planctomyces limnophilus DSM 3776]
          Length = 481

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 65/399 (16%), Positives = 138/399 (34%), Gaps = 62/399 (15%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSI--------LLPIEISVSSSGEIL---NEDNVV 57
             +N PA      + +I  I   + W++          P + SV  SG ++       + 
Sbjct: 38  QAQNFPALQLAQPISTIRWISTALLWALPISLIVMMFAPWQQSVVGSGRVITYDPNHRLQ 97

Query: 58  EIKSPFSGIIKKFQVE--NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
           EI +P  G I   + E   G+ + +G  L+  E I++  +  L++  +   R  ++TEK+
Sbjct: 98  EIDAPIGGRITNIRAELVEGAIVKKGEVLMDIEVIDSALIFRLEEQFMATQR-KLETEKT 156

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
               +   Y+   +AFE+   Q      ++     +       ++  +            
Sbjct: 157 ----IAIAYEQQVQAFEAIRNQTELAQDEFIKMAGQKLLAEQQNLKAAT----------- 201

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                         A     +KD      LFE+   S+ ++   ER   +   +L +   
Sbjct: 202 --------------AAYEQAEKDRIRRIQLFEQKVESRYEVEIAERKAQEEQAKLAQANA 247

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT-----ILEKTREQK 290
             +     ++    E   +    + +I       Q++  D  S          ++  + +
Sbjct: 248 YVEAAKSELSAKEAERLYKIREAITKIDSARAVYQKSLGDIASTEKEIADIQAKQKLQVQ 307

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV----KKGY 346
           ++++PI G ++   +F          PL+++VP +    +  KV       V    K G 
Sbjct: 308 SVVAPIDGYVLRLTNFQGGKIISAGTPLLELVPLTADRAVEIKVDGNDAPLVASLSKDGQ 367

Query: 347 TATVR----------FPHYADIREKKFKAIIEKIDPIIS 375
              VR          F  +  +    F  ++  +D +  
Sbjct: 368 HRKVRLQFEGWPAVQFSGWPSVAVGTFGGVVAVVDSMDD 406


>gi|157370556|ref|YP_001478545.1| secretion protein HlyD family protein [Serratia proteamaculans 568]
 gi|157322320|gb|ABV41417.1| secretion protein HlyD family protein [Serratia proteamaculans 568]
          Length = 431

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/406 (12%), Positives = 117/406 (28%), Gaps = 60/406 (14%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
               G ++    ++++ +  +G + +  V  G+ +  G  L                 S+
Sbjct: 60  ARLEGVVMPSSGLIKVVARSAGQVTERLVAEGAAVKAGQALYRLSGEYFNGQGVGTLASV 119

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                        +R+ ++L+           +   G+      
Sbjct: 120 -------------------------SDSLNRQYRMLEHQRAQELATRVLQQTGVRQRIAQ 154

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L  +L+   +  L          L++         +   + L  K  VS+ +  QQ   +
Sbjct: 155 LNQELSSADAAML----------LVQQQAKLSHSLMERYRKLIAKGYVSELEFQQQRMTL 204

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +    +E +  Q+     +      A  E     ++      + +R       +   L
Sbjct: 205 STA----QEKVELQRQAQLRLKRELAAAASELRTLEQQQQGRDAELERQLQGIKQQKIEL 260

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR--------AKVT 335
              R+   + +P+ G I    + +     +QS PL+ +V       +           + 
Sbjct: 261 GAQRDHT-LTAPVDGHIAVVLARA-GQTVKQSDPLLMMVADDAQLQVELFAPSKAVGFIK 318

Query: 336 PKQ-IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--------Y 386
           P+Q +  +K      +RF  +   +      +   I          L            +
Sbjct: 319 PQQRVGFIKPQQRVGLRFASFPYEKFGVQYGVTRAITDTSLSASEALLQNPMVWKENEGH 378

Query: 387 YEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           Y VI+ +     +       LR G          +  L + ++ P+
Sbjct: 379 YRVIVALDKTTITAYGRQEPLRVGMTVSADVELDSRRLYEWLLEPL 424


>gi|300864878|ref|ZP_07109725.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300337120|emb|CBN54875.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 556

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/411 (13%), Positives = 131/411 (31%), Gaps = 64/411 (15%)

Query: 49  EILNEDNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            I +   V  ++        SG I +  VE G ++ QG  +   E  +    +   +  +
Sbjct: 81  RITSSGTVQPVQRVNLSPKTSGRIAELYVEQGDRVQQGQLIARMESRDIEAQLMQAQARL 140

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            +    +D  ++     N   ++++      + +      +  S   +V     S     
Sbjct: 141 ASAIAKLDQLQAG----NRPEEIVQAQARLEQIEANLAQLRSGSRSEEVAQSQASLNEAQ 196

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ---------- 213
            ++   +  S+       +++    +A      + LT  ++L E+ A+SQ          
Sbjct: 197 ARLANAQSGSLLQEIAQAKSQIEANKAAAELTAQRLTRNQDLVEEGAISQDQFEEYKKED 256

Query: 214 -----------NDLNQQERIVYKSTLELRENIHEQKNMLRHIN-----ELYDEANLEFAN 257
                        L Q +        +L+  + +Q+  L         E    A  E   
Sbjct: 257 RTARANVQEAERRLQQLQENRRSQIQQLQAAVEQQRQALNQKQNGTRPEEITRAEAEVTE 316

Query: 258 YLKEISR--------DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
              ++++        ++   +   A+  ++++  +   E   I +P  G I    +    
Sbjct: 317 ARSKLAQLVNGSRPEEIAAAKANVAEVNAQVSYYKVQLEDSRIRAPFGGIITQRYAI-QG 375

Query: 310 NYAQQ--------SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
            +           S     +V  ++   + AKV    I  +K G    +    Y D    
Sbjct: 376 AFVTPTTSASATDSATSTSVVALARDLEVLAKVPESDIGQIKPGQVVEIVADAYPDQ--- 432

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
            F   ++ I P   ++ +       ++V + I           L++G   +
Sbjct: 433 VFTGKVKLIAPEAVKERDVTL----FQVRVAID-----KGKDLLQSGMNVD 474


>gi|206900925|ref|YP_002250553.1| secretion protein HlyD [Dictyoglomus thermophilum H-6-12]
 gi|206740028|gb|ACI19086.1| secretion protein HlyD [Dictyoglomus thermophilum H-6-12]
          Length = 431

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 65/424 (15%), Positives = 138/424 (32%), Gaps = 97/424 (22%)

Query: 17  LKRMTLLSIIGIIGLITWSILLP--------------------IEISVSSSGEILNEDNV 56
            K   +  I+ ++G+  W                         + I+VS SG +  E   
Sbjct: 3   RKLFIIFVILILVGVGLWWGFGRTNKGNKNNVTLNTYTVRRGDLTITVSGSGILEAE-RS 61

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           ++I S  SG +    VE G ++ +G  L+  +  +  +                      
Sbjct: 62  LDITSKVSGTVIYV-VEEGKRVKEGDVLVKIDPTDYQNAY-------------------- 100

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                             ++ L+ +    +S      NY             T+ R +  
Sbjct: 101 ------------------QQALIAYENYENSYEQAKLNYE------------TQKRQLEK 130

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           N  D +           + + +L  ++ LF+K   SQ+DL+  +    K+          
Sbjct: 131 NLKDAQITRDNAYIEYQNAKNNLERIEELFKKGFASQSDLDTAKFNFEKA---------- 180

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            KN L             + + LK + ++LE ++ +       L+  ++  E   I +P 
Sbjct: 181 -KNSLTQAESNLKLVKENYDSQLKSLQKELEASKLSLEKAKIDLSNAKRNLENTIIKAPF 239

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G +              +  LM ++  +K   +  +V    I  V  G    +    + 
Sbjct: 240 SGIVANVNVV-KGQNISSNTVLMTLL-DTKNVELSLEVDETDIGKVSVGLPVRISLDAFP 297

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           D    +F+  + +I P  +  +N       ++V ++I      + ++ L+ G  A+    
Sbjct: 298 DE---EFEGKVIRISPTATISNNI----PIFKVRVRIP-----NEDLRLKVGMSADGDII 345

Query: 417 AKNT 420
               
Sbjct: 346 LLER 349


>gi|327405977|ref|YP_004346815.1| hypothetical protein Fluta_4015 [Fluviicola taffensis DSM 16823]
 gi|327321485|gb|AEA45977.1| hypothetical protein Fluta_4015 [Fluviicola taffensis DSM 16823]
          Length = 432

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 69/450 (15%), Positives = 161/450 (35%), Gaps = 39/450 (8%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLIT---WSILLPIEISVSSSGEILNEDNV- 56
           +  +  + +  + P  + R  +  + GII L     W I  P ++     GE +   +V 
Sbjct: 12  IRSYEVQEIMSHIPNWIIRWGISLVFGIIILFLILSWIIKYP-DVI---QGETIVTTSVP 67

Query: 57  ---VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
              + +KS  SG ++   + + S + +   + + +   + +      V +  +R      
Sbjct: 68  PVKLVVKS--SGELEHLILTDNSMVEKNQTIASIKSTLSDNAKAYLVVELAEVR------ 119

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           KS ++    K D+        + Q    + K      K      ++ +  L +       
Sbjct: 120 KSYINNSLQKLDLKNTPMLFGDLQTNYSILKNALKNYKYLINDDNTSFNMLNVSQQIKNQ 179

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
             L +L +  + + +  L+S+        K L+EK  +SQ +  ++E+    +  E+   
Sbjct: 180 KALMQL-ISKELNSVNKLVSNAGNKFKSDKTLYEKGVISQAEFFEREKAYETAIGEINNL 238

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              +      I +L  + N    N+ +     L +     +   + L    +      I+
Sbjct: 239 EKTKITTAITITDLEKQLNDLRFNFEQRKKTLLLEIDTQLSVLENALLTWSR---NYQIV 295

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SPI G + Y  + S + + +Q + L  ++P ++      K+       VK G    ++  
Sbjct: 296 SPIKGKLTYLLTLSENQFIEQGKELFAVIPENQEYVAHLKIPKSGYGKVKVGQKVMLKID 355

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPA 411
           ++      +    ++ +  I +++         Y V +K+ +         +        
Sbjct: 356 NFPSHEYGQLVGKVKSVSLIAAEKS--------YLVNVKLLNGLKTTYHKELNYIPEMSG 407

Query: 412 EVLFTAKN-TTLAQEIIHPITDNWPKIFER 440
                 ++       I   I + + KIF+R
Sbjct: 408 SAEIITEDLR-----ITDRIFNQFRKIFDR 432


>gi|283852271|ref|ZP_06369543.1| secretion protein HlyD family protein [Desulfovibrio sp. FW1012B]
 gi|283572353|gb|EFC20341.1| secretion protein HlyD family protein [Desulfovibrio sp. FW1012B]
          Length = 402

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 56/382 (14%), Positives = 116/382 (30%), Gaps = 45/382 (11%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            +  V  I    +G +    VE+   +  G  L+  +  +    +   K  + +    + 
Sbjct: 51  VDGRVHPITPRVAGYVNAVPVEDNQLVAAGDVLVVLDPTDNAVALAQAKADLASAEAQLA 110

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            ++  +    ++                                 +++    L+ +    
Sbjct: 111 AQELGVPLQLSQTS-----------------------------SKVTAAKAQLESEQRSF 141

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                 R     ++  ++  L   + D T +  L  K  VSQ+DL+  E        +LR
Sbjct: 142 DQAVKERDAAVQEADQIQTQLDQDKLDYTRISQLRGKGVVSQSDLDTIENKRRGHEAQLR 201

Query: 232 ENIHEQKNMLRHINELYDEAN--------LEFANYLKEISRDLEQNQRTFADE-MSKLTI 282
               + +   R +  +  +           E       I       QR   +    K+  
Sbjct: 202 AARAKAEGAGRRLESITADIKRLRSEITLAETGQDQAVIQDKEAAAQRARVELAREKVRQ 261

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP-HSKLTYIRAKVTPKQIQH 341
            E       IL+P+AG +   Q   S       Q LM +VP  +   ++ A     Q+++
Sbjct: 262 AELNLTYTRILAPVAGHVTKKQI-ESGRLVAAGQSLMTLVPLTASELWVTANYKETQLKN 320

Query: 342 VKKGYTATVRFPHYADI-REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
           V+ G   T+    Y       + ++I+     + S       +  Y +++ +I      D
Sbjct: 321 VQPGQRVTMEVDTYPGRDITGRVESIMAGTGSVFSLFPTENASGNYVKIVQRIPVKIVFD 380

Query: 401 NNI----ELRNGFPAEVLFTAK 418
                   LR G          
Sbjct: 381 KENGDLPNLRLGMSVVPTIHTD 402


>gi|60683255|ref|YP_213399.1| putative hemolysin secretion transport system membrane protein
           [Bacteroides fragilis NCTC 9343]
 gi|60494689|emb|CAH09490.1| putative hemolysin secretion transport system membrane protein
           [Bacteroides fragilis NCTC 9343]
 gi|301164774|emb|CBW24333.1| putative hemolysin secretion transport system membrane protein
           [Bacteroides fragilis 638R]
          Length = 439

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 55/432 (12%), Positives = 140/432 (32%), Gaps = 18/432 (4%)

Query: 7   KNLKRNHPASLKRMTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +    PA + R  + +  + ++ L+  S        +++   +  +D    + +  +G
Sbjct: 18  QEVMNRVPAWILRSGITVLFVIVVALVAGSYWFKYPDVIAAEVTVSTQDPPAYVVARAAG 77

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            ++   V+NG ++   T L T E+      +   +  ++  +    T +S    L    +
Sbjct: 78  RLENLYVQNGQEVEPDTNLGTIENTACASDVFSLQERMRKWKQEGYTPESG-KGLFLHSE 136

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                    +     F+               +   +S +  L   +  Y     + ++ 
Sbjct: 137 TDRWRLGEIQSAYAAFVSTLSEMVRMNELGYYAKKLQSQRELLETQKKYYGQ---VRSQY 193

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            L+    +      T    L+ + A+   +  Q      +S         +   +   I 
Sbjct: 194 FLIEKEYALAHASYTRDSILYHRQAMIITEFEQSGSRYLQSLQSRESARMQLTQVDMQIE 253

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +  +          +E        +       S+LT  E+   +  + SP+ G + +   
Sbjct: 254 QSEETLLDLEKQAFEEKQTQAVNLRNATDQLQSQLTAWEQ---RYLLRSPVGGKVTFLNV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +S + Y +    +  + P  +   +  A +  +    VK G    +R  +Y D      K
Sbjct: 311 WSVNQYVESGATVFVVAPEEESLPVGTALLPLQGSGKVKAGQRVNLRLNNYPDQEFGYVK 370

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTL 422
             ++ + P+          +  Y V + + D   ++    + L             +  L
Sbjct: 371 GKVKSVSPL-------PTAEGMYVVDIALPDGLTTNYGKTLPLTREMKGSAEIITDDLRL 423

Query: 423 AQEIIHPITDNW 434
            + +I P+   +
Sbjct: 424 LERLIMPLRKIF 435


>gi|253567212|ref|ZP_04844662.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251944043|gb|EES84562.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 439

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 55/432 (12%), Positives = 140/432 (32%), Gaps = 18/432 (4%)

Query: 7   KNLKRNHPASLKRMTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +    PA + R  + +  + ++ L+  S        +++   +  +D    + +  +G
Sbjct: 18  QEVMNRVPAWILRSGITVLFVIVVALVAGSYWFKYPDVIAAEVTVSTQDPPAYVVARAAG 77

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            ++   V+NG ++   T L T E+      +   +  ++  +    T +S    L    +
Sbjct: 78  RLENLYVQNGQEVEPDTNLGTIENTACASDVFSLQERMRKWKQEGYTPESG-KGLFLHSE 136

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                    +     F+               +   +S +  L   +  Y     + ++ 
Sbjct: 137 TDRWRLGEIQSAYAAFVSTLSEMVRMNELGYYAKKLQSQRELLETQKKYYGQ---VRSQY 193

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            L+    +      T    L+ + A+   +  Q      +S         +   +   I 
Sbjct: 194 FLIEKEYALAHASYTRDSILYHRQAMIITEFEQSGSRYLQSLQSRESARMQLTQVDMQIE 253

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +  +          +E        +       S+LT  E+   +  + SP+ G + +   
Sbjct: 254 QSEETLLDLEKQAFEEKQTQAVNLRNATDQLQSQLTAWEQ---RYLLRSPVGGKVTFLNV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +S + Y +    +  + P  +   +  A +  +    VK G    +R  +Y D      K
Sbjct: 311 WSVNQYVESGATVFVVAPEEESLPVGTALLPLQGSGKVKAGQRVNLRLNNYPDQEFGYVK 370

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTL 422
             ++ + P+          +  Y V + + D   ++    + L             +  L
Sbjct: 371 GKVKSVSPL-------PTAEGMYVVDIALPDGLTTNYGKTLPLTREMKGSAEIITDDLRL 423

Query: 423 AQEIIHPITDNW 434
            + +I P+   +
Sbjct: 424 LERLIMPLRKIF 435


>gi|149175205|ref|ZP_01853827.1| probable toxin secretion protein [Planctomyces maris DSM 8797]
 gi|148845814|gb|EDL60155.1| probable toxin secretion protein [Planctomyces maris DSM 8797]
          Length = 504

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 61/456 (13%), Positives = 152/456 (33%), Gaps = 63/456 (13%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKS 61
           +           + R+  ++++  I L+      P + SV+ +G +L    +     I++
Sbjct: 45  LRLARSSKTVRKIARVLFVALLLTIVLMV---FAPWQQSVTGTGNVLAYAPDQRQQVIQA 101

Query: 62  PFSGIIK----KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           P  G I     +      +++ QG  +    D++        +     L   +   + ++
Sbjct: 102 PIKGRIASWGDQIF--ENARVDQGQVIAKISDLD--------ESYAARLDLQLMNSQQSV 151

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                + +  ++A ++ +  +  +  +  +  + V    I++    ++M + ++++    
Sbjct: 152 TAAGQQLEASQRALDAAKTIVESYQAQVQAYET-VKRETIAAQDAYIEMAVKKVKAENQK 210

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL--------- 228
            ++ E     L+A       +   MK L  +N +S   L +  R + +++          
Sbjct: 211 LVEYEAALPQLQA-------EYNRMKTLQAENNISLQKLQEVNRKLKEASSKAKGAEFYY 263

Query: 229 -----ELRENIHEQKNMLRHINELYDEANLEFANY---LKEISRDLEQNQRTFADEMSKL 280
                EL     E+K  +       D+           + +   D+ + Q+       +L
Sbjct: 264 GAAQDELSGKQSERKAKIEKAQADIDKTRALLRKANGDVSKAESDVAKAQQGLNKAEKEL 323

Query: 281 TILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
             +     ++    I +P  G IV       +   ++  P+  IVP++    ++  +   
Sbjct: 324 LDMRVKVARQETQVIKAPFDGYIVQITPNLGTGILKEGDPICTIVPYTTERSVQVWLDGN 383

Query: 338 QIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
               V+ G            V+F  +  +    F   +  +D       +N   +    V
Sbjct: 384 DAPLVEPGRPVRLQFEGWPAVQFAGWPSVAVGTFGGTVVSVDA-----TDNGNGKFRILV 438

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
               +D  +      LR G  A       N      
Sbjct: 439 RPDPSDEPWPQERF-LRQGVRANAWVLL-NRVPLWY 472


>gi|134283149|ref|ZP_01769850.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia pseudomallei 305]
 gi|134245344|gb|EBA45437.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia pseudomallei 305]
          Length = 422

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/401 (12%), Positives = 128/401 (31%), Gaps = 58/401 (14%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +  G +  +  +V++ +  +G++ K  V  G  + +G  L T                 
Sbjct: 59  TTVDGVLTPDTGLVKVYAQQTGVVLKKNVVEGQHVTRGQVLYTVST-------------- 104

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                D+   A    +  L++   +  ++  +  +         
Sbjct: 105 ---------------------DLQSAAAGQTQAALIEQAQQRKTSLQQELDKTRRLQQDE 143

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                +++ S+      ++++ +  R   S      +    L  ++ +S++   Q++  +
Sbjct: 144 RDTLQSKIASLRTELAGIDDQIAAQRTRASIAADAASRYAGLLAQDYISKDQAQQRQADL 203

Query: 224 YKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                +L   + ++ +  + + E  ++    +L+  N L +I R +    RT  +  +K 
Sbjct: 204 LDQRSKLNSLMRDRASTAQSLKEALNDLSGLSLKQQNQLSQIDRSVIDVDRTLIESEAK- 262

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                   +  + +P  GT            A  S PL  IVP          V    + 
Sbjct: 263 -------REFVVTAPETGTATAV-IAEPGQTADTSHPLASIVPTGAHWQAYLFVPSAAVG 314

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN---------NLQTQEYYEVIL 391
            V  G    VR+  Y   +  +++A +  I                     +  YY + +
Sbjct: 315 FVHVGDRVLVRYQAYPYQKFGQYEASVVSIARTALSAAELATSGGPAAQTASGTYYRITV 374

Query: 392 KITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +   +         L+ G   +     +   L + ++ P+
Sbjct: 375 ALNSQSVMAYGRAQPLQAGMALQADVLQERRRLYEWVLEPL 415


>gi|190894323|ref|YP_001984617.1| probable protein secretion protein, HlyD family [Rhizobium etli
           CIAT 652]
 gi|190699984|gb|ACE94067.1| probable protein secretion protein, HlyD family [Rhizobium etli
           CIAT 652]
          Length = 393

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 65/414 (15%), Positives = 127/414 (30%), Gaps = 72/414 (17%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S+ R  LL +    G +    L+ I +S+ S G I        + +P SG I +      
Sbjct: 34  SIYRAILLFVAAAFGSLP---LVTIPVSMQSVGTIRPIVEKTPLIAPVSGRISRVLAFEN 90

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  ++ F+D    + +      I                                
Sbjct: 91  DVVAKGKEIIAFDDHVIEEKLSGVLADIHA------------------------------ 120

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                      S  +  F   ISS  R       +  S    R+   N     +   S+ 
Sbjct: 121 ----------KSDLAHDFQTLISSGARLSVSPPLQTESATAERVHFLNLLRENQNARSNA 170

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +L   K L    A     ++  E+      +E++  I  ++                 
Sbjct: 171 AAELDRAKRLVSAAAAPAKTVD--EKAFALQNIEVQGEILVRRKT--------------- 213

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                + ++ L        +  + L  LE  R+   I +P++G +      +  +Y Q  
Sbjct: 214 ----ADWNQKLLDANLRLKELTATLHQLEHERDLHRIRAPVSGALEQFSGLAHGSYVQSG 269

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q +  I P+         V+P  I  V+ G    ++   +   +    KA + ++    +
Sbjct: 270 QTVGWISPNDD-LVAEIYVSPNDIGFVQPGQPVRLQVDAFNYNQWGVIKARVVEV----A 324

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
           Q          ++V   ++    +  +     L+ G      F   N TL Q +
Sbjct: 325 QDFTLHDGNPVFKVQCALSRSELALKSGAIGHLKKGMTVRARFLLANRTLLQLL 378


>gi|265767808|ref|ZP_06095340.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263252480|gb|EEZ24008.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 439

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 56/432 (12%), Positives = 140/432 (32%), Gaps = 18/432 (4%)

Query: 7   KNLKRNHPASLKRMTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +    PA + R  + +  + ++ L+  S        +++   +  +D    + S  +G
Sbjct: 18  QEVMNRVPAWILRSGITVLFVIVVALVAGSYWFKYPDVIAAEVTVSTQDPPAYVVSRAAG 77

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            ++   V+NG ++   T L T E+      +   +  ++  +    T +S    L    +
Sbjct: 78  RLENLYVQNGQEVGPDTNLGTIENTACASDVFSLQERMRKWKQEGYTPESG-KGLFLHSE 136

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                    +     F+               +   +S +  L   +  Y     + ++ 
Sbjct: 137 TDRWRLGEIQSAYAAFVSTLSEMVRMNELGYYAKKLQSQRELLETQKKYYGQ---VRSQY 193

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            L+    +      T    L+ + A+   +  Q      +S         +   +   I 
Sbjct: 194 FLIEKEYALAHASYTRDSILYHRQAMIITEFEQSGSRYLQSLQSRESARMQLTQVDMQIE 253

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +  +          +E        +       S+LT  E+   +  + SP+ G + +   
Sbjct: 254 QSEETLLDLEKQAFEEKQTQAVNLRNATDQLQSQLTAWEQ---RYLLRSPVGGKVTFLNV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +S + Y +    +  + P  +   +  A +  +    VK G    +R  +Y D      K
Sbjct: 311 WSVNQYVESGATVFVVAPEEESLPVGTALLPLQGSGKVKAGQRVNLRLNNYPDQEFGYVK 370

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTL 422
             ++ + P+          +  Y V + + D   ++    + L             +  L
Sbjct: 371 GKVKSVSPL-------PTAEGMYVVDIALPDGLTTNYGKTLPLTREMKGSAEIITDDLRL 423

Query: 423 AQEIIHPITDNW 434
            + +I P+   +
Sbjct: 424 LERLIMPLRKIF 435


>gi|53715322|ref|YP_101314.1| putative hemolysin secretion protein [Bacteroides fragilis YCH46]
 gi|52218187|dbj|BAD50780.1| putative hemolysin secretion protein [Bacteroides fragilis YCH46]
          Length = 439

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 55/432 (12%), Positives = 140/432 (32%), Gaps = 18/432 (4%)

Query: 7   KNLKRNHPASLKRMTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +    PA + R  + +  + ++ L+  S        +++   +  +D    + +  +G
Sbjct: 18  QEVMNRVPAWILRSGITVLFVIVVALVAGSYWFKYPDVIAAEVTVSTQDPPAYVVARAAG 77

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            ++   V+NG ++   T L T E+      +   +  ++  +    T +S    L    +
Sbjct: 78  RLENLYVQNGQEVEPDTNLGTIENTACASDVFSLQERMRKWKQEGYTPESG-KGLFLHSE 136

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                    +     F+               +   +S +  L   +  Y     + ++ 
Sbjct: 137 TDRWRLGEIQSAYAAFVSTLSEMVRMNELGYYAKKLQSQRELLETQKKYYGQ---VRSQY 193

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            L+    +      T    L+ + A+   +  Q      +S         +   +   I 
Sbjct: 194 FLIEKEYALAHASYTRDSILYYRQAMIITEFEQSGSRYLQSLQSRESARMQLTQVDMQIE 253

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +  +          +E        +       S+LT  E+   +  + SP+ G + +   
Sbjct: 254 QSEETLLDLEKQAFEEKQTQAVNLRNATDQLQSQLTAWEQ---RYLLRSPVGGKVTFLNV 310

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +S + Y +    +  + P  +   +  A +  +    VK G    +R  +Y D      K
Sbjct: 311 WSVNQYVESGATVFVVAPEEESLPVGTALLPLQGSGKVKAGQRVNLRLNNYPDQEFGYVK 370

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTTL 422
             ++ + P+          +  Y V + + D   ++    + L             +  L
Sbjct: 371 GKVKSVSPL-------PTAEGMYVVDIALPDGLTTNYGKTLPLTREMKGSAEIITDDLRL 423

Query: 423 AQEIIHPITDNW 434
            + +I P+   +
Sbjct: 424 LERLIMPLRKIF 435


>gi|257438795|ref|ZP_05614550.1| hypothetical protein FAEPRAA2165_01346 [Faecalibacterium
           prausnitzii A2-165]
 gi|257198763|gb|EEU97047.1| hypothetical protein FAEPRAA2165_01346 [Faecalibacterium
           prausnitzii A2-165]
          Length = 370

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 92/276 (33%), Gaps = 28/276 (10%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-----KNAVSQNDLNQQ---------- 219
           ++   DL+ +    +  L  ++K  +  + L +     KN  S+ D++ Q          
Sbjct: 94  HIKSTDLDIQQDSYQKQLDIYKKQKSQYEKLLKSIQDDKNYFSETDIDDQPYYYQYESYK 153

Query: 220 ----ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
               ++    S  +      EQ   +   N+   E    + + L+ IS +L   Q    +
Sbjct: 154 SQVSQKAFDASPYQAAGYTDEQIRTMMEQNQ--SEVESLYYSTLQSISANLTSVQANIDN 211

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             ++L  L        I +P +G I  +  +           L  +   +    I A VT
Sbjct: 212 IEAQLDALNTGANDYYIYAPTSGVIHMDTPYKVGMVLSAGSALATVASENSDLEIVAAVT 271

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
                 +  G    +     ++         +  ID  ++   N      YY++ +K  +
Sbjct: 272 VNDRPLINVGDPCKIAITGLSEYSYGTLTGTVTSIDSDVTSSTNG----SYYKMTIKPDN 327

Query: 396 ---LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
              ++ S + ++L NG            T    ++ 
Sbjct: 328 TYVVSTSGDKVDLSNGMSVTARVEYDELTYFDYVME 363



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 24/206 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +++  PA    + LL    ++ L+ WS          S+G +    N   I S +SG I 
Sbjct: 18  MEKKLPAFGYALILLVAFLMVFLVIWSTQNKRTYVSQSTGSVQAA-NKTYIMSSYSGSIT 76

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN------ 122
           +  +  GS + +G  +   +  +     D  +  +   +      +  L  + +      
Sbjct: 77  ELNISEGSYVTEGDLIAHIKSTDLDIQQDSYQKQLDIYKKQKSQYEKLLKSIQDDKNYFS 136

Query: 123 ----------------KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                           K  V +KAF++   Q   +  +   T  +     + S+Y S   
Sbjct: 137 ETDIDDQPYYYQYESYKSQVSQKAFDASPYQAAGYTDEQIRTMMEQNQSEVESLYYSTLQ 196

Query: 167 KL-TRMRSIYLNRLDLENKSSLLRAL 191
            +   + S+  N  ++E +   L   
Sbjct: 197 SISANLTSVQANIDNIEAQLDALNTG 222


>gi|21492986|ref|NP_660061.1| HlyD family protein secretion protein [Rhizobium etli CFN 42]
 gi|21467399|gb|AAM55062.1| probable protein secretion protein, HlyD family [Rhizobium etli CFN
           42]
          Length = 393

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 65/414 (15%), Positives = 127/414 (30%), Gaps = 72/414 (17%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S+ R  LL +    G +    L+ I +S+ S G I        + +P SG I +      
Sbjct: 34  SIYRAILLFVAAAFGSLP---LVTIPVSMQSVGTIRPIVEKTPLIAPVSGRISRVLAFEN 90

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  ++ F+D    + +      I                                
Sbjct: 91  DVVAKGKEIIAFDDHVIEEKLSGVLADIHA------------------------------ 120

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                      S  +  F   ISS  R       +  S    R+   N     +   S+ 
Sbjct: 121 ----------KSDLAHDFQTLISSGARLSVSPPLQTESATAERVHFLNLLRENQNARSNA 170

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +L   K L    A     ++  E+      +E++  I  ++                 
Sbjct: 171 AAELDRAKRLVSAAAAPAKTVD--EKAFALQNIEVQGEILVRRKT--------------- 213

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                + ++ L        +  + L  LE  R+   I +P++G +      +  +Y Q  
Sbjct: 214 ----ADWNQKLLDANLRLKELTATLHQLEHERDLHRIRAPVSGALEQFSGLAHGSYVQSG 269

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q +  I P+         V+P  I  V+ G    ++   +   +    KA + ++    +
Sbjct: 270 QTVGWISPNDD-LVAEIYVSPNDIGFVQPGQPVRLQVDAFNYNQWGVIKARVVEV----A 324

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
           Q          ++V   ++    +  +     L+ G      F   N TL Q +
Sbjct: 325 QDFTLHDGNPVFKVQCALSRSELALKSGAIGHLKKGMTVRARFLLANRTLLQLL 378


>gi|218659013|ref|ZP_03514943.1| HlyD family secretion protein [Rhizobium etli IE4771]
          Length = 103

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 27/91 (29%), Gaps = 4/91 (4%)

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNG 408
           +R   +      +       +        +      YY V + +        + + L  G
Sbjct: 14  LRMSAFNQRTTPELNG---HVSSSRDLTTDQRSGLSYYIVRIAVPPEELQKLDGLTLLPG 70

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
            PAE        T    ++ P+TD   + F 
Sbjct: 71  MPAEAFIQTSERTALSYLVKPLTDQLNRAFR 101


>gi|218672097|ref|ZP_03521766.1| probable protein secretion protein, HlyD family [Rhizobium etli
           GR56]
          Length = 361

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 65/414 (15%), Positives = 127/414 (30%), Gaps = 72/414 (17%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S+ R  LL +    G +    L+ I +S+ S G I        + +P SG I +      
Sbjct: 2   SIYRAILLFVAAAFGSLP---LVTIPVSMQSVGTIRPIVEKTPLIAPVSGRISRVLAFEN 58

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  ++ F+D    + +      I                                
Sbjct: 59  DVVAKGKEIIAFDDHVIEEKLSGVLADIHA------------------------------ 88

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                      S  +  F   ISS  R       +  S    R+   N     +   S+ 
Sbjct: 89  ----------KSDLAHDFQTLISSGARLSVSPPLQTESATAERVHFLNLLRENQNARSNA 138

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +L   K L    A     ++  E+      +E++  I  ++                 
Sbjct: 139 AAELDRAKRLVSAAAAPAKTVD--EKAFALQNIEVQGEILVRRKT--------------- 181

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                + ++ L        +  + L  LE  R+   I +P++G +      +  +Y Q  
Sbjct: 182 ----ADWNQKLLDANLRLKELTATLHQLEHERDLHRIRAPVSGALEQFSGLAHGSYVQSG 237

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q +  I P+         V+P  I  V+ G    ++   +   +    KA + ++    +
Sbjct: 238 QTVGWISPNDD-LVAEIYVSPNDIGFVQPGQPVRLQVDAFNYNQWGVIKARVVEV----A 292

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
           Q          ++V   ++    +  +     L+ G      F   N TL Q +
Sbjct: 293 QDFTLHDGNPVFKVQCALSRSELALKSGAIGHLKKGMTVRARFLLANRTLLQLL 346


>gi|254198480|ref|ZP_04904901.1| putative secretion protein [Burkholderia pseudomallei S13]
 gi|169655220|gb|EDS87913.1| putative secretion protein [Burkholderia pseudomallei S13]
          Length = 423

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/401 (12%), Positives = 127/401 (31%), Gaps = 58/401 (14%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +  G +  +  +V++ +  +G++ K  V  G  + +G  L T                 
Sbjct: 60  TTVDGVLTPDTGLVKVYAQQTGVVLKKNVVEGQHVTRGQVLYTVST-------------- 105

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                D+   A    +  L++   +  ++  +  +         
Sbjct: 106 ---------------------DLQSAAAGQTQAALIEQAQQRKTSLQQELDKTRRLQQDE 144

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                +++ S+      ++++ +  R   S      +    L  ++ +S++   Q++  +
Sbjct: 145 RDTLQSKIASLRTELAGIDDQIAAQRTRASIAADAASRYAGLLAQDYISKDQAQQRQADL 204

Query: 224 YKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                +L   + ++ +  + + E  ++    +L+  N L +I R +    RT  +  +K 
Sbjct: 205 LDQRSKLNSLMRDRASTAQSLKEALNDLSGLSLKQQNQLSQIDRSVIDVDRTLIESEAK- 263

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                   +  + +P  GT            A  S PL  IVP          V    + 
Sbjct: 264 -------REFVVTAPETGTATAV-IAEPGQTADTSHPLASIVPTGAHWQAYLFVPSAAVG 315

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN---------NLQTQEYYEVIL 391
            V  G    VR+  Y   +  +++A +  I                     +  YY + +
Sbjct: 316 FVHVGDRVLVRYQAYPYQKFGQYEASVVSIARTALSAAELATSGGPAAQTASGTYYRITV 375

Query: 392 KITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +             L+ G   +     +   L + ++ P+
Sbjct: 376 ALNSQNVMAYGRAQPLQAGMALQADVLQERRRLYEWVLEPL 416


>gi|307730634|ref|YP_003907858.1| hypothetical protein BC1003_2614 [Burkholderia sp. CCGE1003]
 gi|307585169|gb|ADN58567.1| hypothetical protein BC1003_2614 [Burkholderia sp. CCGE1003]
          Length = 397

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/434 (11%), Positives = 142/434 (32%), Gaps = 56/434 (12%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +L +    S + +   +   ++  + ++ +  +E+      EI++   +  ++   SG++
Sbjct: 5   HLPQFRDVSWRWLAYAASTLVVCAVAFAFVHQVELKQDVRAEIVSPSEIK-VQGL-SGLV 62

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V + +++ QGTPL   E                            L   ++     
Sbjct: 63  SDIYVNSAARVEQGTPLFRLE--------------------------RDLSLASDGRQRP 96

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                +R+EQL     +Y    S +           L       +S       L+ +SS 
Sbjct: 97  AFDEHARDEQLRTTEAQYLQRKSDLL--------AQLDAARLAAQSRRAEMAALDEQSSQ 148

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            + L +  Q+ L  ++++ +   V+   + Q   +++++ + + +    ++ +   +   
Sbjct: 149 NQQLAAEAQRALARLESVSD--YVTAERIEQARALMHQAKVSVAQGSARRQQLNAELGAA 206

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                      L E++    ++ +       ++      R+   I +P AG + ++    
Sbjct: 207 IG-TQTSLDAQLAELAARYARDVQDIRMRFEQI------RQDAVISAPKAGVVTFSGLV- 258

Query: 308 SSNYAQQSQPLMKI-VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      + I            ++  ++   V++G    ++   +   +   + A 
Sbjct: 259 PGRTLSPEDVALVISTGEQGPLRAALRIPSRRRGFVREGQVVRLKLDAFPYAKFGSYPAR 318

Query: 367 IEKIDPII---------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           I+ I             + +    +        L      F     ++  G  A      
Sbjct: 319 IDSISRTTVRSAMSPAGASEARGAEGDYMAWATLGDGQFKFERQRFDILPGMTATASIVI 378

Query: 418 KNTTLAQEIIHPIT 431
           +  T+A+ ++ P+ 
Sbjct: 379 ERRTIAEWVLAPLF 392


>gi|265752899|ref|ZP_06088468.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263236085|gb|EEZ21580.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 429

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 59/440 (13%), Positives = 141/440 (32%), Gaps = 37/440 (8%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +    P +L R  +     +I  +           +V +   I  E+    I +  +G
Sbjct: 14  QEILSRPPHALIRWGITVFFMVISFLFIGGCFFSYPDTVEAGITITTENPPAWIVARSTG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +K+  +++  ++  G  +    +   T  + L K  ++  +          D +  +  
Sbjct: 74  KLKEVFLKDKQKVKAGELIGVVNNPADTREVLLLKKELEAFQIS--------DSMICQDH 125

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
              +      +       K  +         +         +      IY++   L N+ 
Sbjct: 126 FTGRLTLGEIQSAYTGFIKSLTEYRDFLKLDLYKEKEEAARRELNEYQIYISH--LHNEV 183

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNMLR 242
           +L +  L       +  + L++K  VS +D  ++++    S     +++  +   +    
Sbjct: 184 NLNKEELKLALSSYSREEILYKKGLVSASDYEKEQQAYLASKRGTEQMQTTLSSARIQEA 243

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +++   E  LE       +   L+               +   +      +P  G + Y
Sbjct: 244 KLHQTIVEIQLEQNQKANSLQVALQTAYDQLQ------VSINNWKLAYLFTAPTDGILSY 297

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
           N+ +  +        +  +V  +    I +AK+       VK G    +R   Y  +   
Sbjct: 298 NEVWQKNQNITAGDKVFSVVAENSGAVIGKAKLPVSNSGKVKSGQRVNIRLTGYPYMEYG 357

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL-----RNGFPAEVLFT 416
                +  I  + ++          Y V +++ D   +  N  L      +G  AEVL  
Sbjct: 358 FLTGKVSSISLLSNEDS--------YTVTVELPDTLQTSYNHILEFQGELSG-SAEVL-- 406

Query: 417 AKNTTLAQEIIHPITDNWPK 436
               +    ++ P+   W K
Sbjct: 407 TDERSFTARLLSPLRYLWEK 426


>gi|218782872|ref|YP_002434190.1| secretion protein HlyD family protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764256|gb|ACL06722.1| secretion protein HlyD family protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 368

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/381 (13%), Positives = 121/381 (31%), Gaps = 64/381 (16%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E  V ++G I  E + +     F+G I +  V+ G  +  G  ++  +D +    +   +
Sbjct: 35  EGLVQANGRI--EGDRITAAGKFAGRILETTVKEGDWVEAGQIMVHMDDAQVQAKVAQAR 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            + +     +   ++ L  ++ +  +                                  
Sbjct: 93  EAYEAGCAQVRAHEAILAAMDAEIPI---------------------------------- 118

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                     + +        E      +A++   +KD    + L E+  VS+++L + E
Sbjct: 119 ---------GVEAAKAGVEHAEAVMGKAKAVMEQAEKDAERFRELAERETVSRHELEKAE 169

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             +  +  +            + + +         A        +++ ++       + +
Sbjct: 170 LGLSVAKQDFFSAKIGVVVARKQLAQAILGFEKIKAK-----EEEVKAHKAVCQQAQAVV 224

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
           +  E      TI +P  G ++   + +         PL  +V      Y++A +  K+I 
Sbjct: 225 SEAESVMNDLTIRAPCNGVVMEKTANT-GEVVSAGSPLFGLV-DLDQLYLKAFIPEKEIG 282

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITD 395
            V  G  A +    + D       A +  I           Q  + + +  YEV + + D
Sbjct: 283 KVSLGQEAMIYTDAFPDQ---PLPARVTFIASQAQFTPKEVQTPDERVKLVYEVKVLLDD 339

Query: 396 LAFSDNNIELRNGFPAEVLFT 416
               +       G PA+V+  
Sbjct: 340 ----NPRRRFTPGLPADVVIR 356


>gi|186683894|ref|YP_001867090.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186466346|gb|ACC82147.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 484

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 127/375 (33%), Gaps = 38/375 (10%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +   +TWS L  I I+V+ +G I+    +   +SP +G ++   V  G  + +G  L T 
Sbjct: 45  VATGLTWSFLGRIPITVTGTGIIVYPSTITSFQSPIAGKLRTINVRAGDYVNRGDVLATL 104

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +  E    + L +  +      + TE SA   +  +    +K    ++ Q L    +   
Sbjct: 105 DQGELMKQLQLVRSKL----GQLPTEDSAASLVQGQRQNADKEAIKQQRQSLQQNLQAVQ 160

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             + +                  + SI  +R +       LR LL + ++ LT  + L +
Sbjct: 161 KLTPILRE-------------KGLNSIQRDRANQTQSLQALRDLLPTFKQRLTNRQQLLQ 207

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNM-----------------LRHINELYDE 250
           + A+S + + Q ++    +  ++ E   + K +                 ++ +     +
Sbjct: 208 EGAISGDTVLQSQQDYLNAVTQINEAESQLKQLDVKEADAQRQYLENLNSIKDLQAQLKQ 267

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR-EQKTILSPIAGTIVYNQSFSSS 309
            + + A   ++    +   ++   +    +  L         + S  +G I+   + S  
Sbjct: 268 LDSKEATAAQQDLETVTTRKKEIQEVQRNIVQLALQLSSNSLVKSSYSGRILEISA-SPG 326

Query: 310 NYAQQSQPLMKIVPH--SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
               Q  P+  I     S      A       + ++ G    V        R       +
Sbjct: 327 QVVLQGTPIGAIAAQKRSAQPVSVAFFPVGDGKQIQPGMKLQVTPSTVQRERFGGIIGAV 386

Query: 368 EKIDPIISQQDNNLQ 382
            ++      ++  L 
Sbjct: 387 TEVSAFPVTKEGALS 401


>gi|53720701|ref|YP_109687.1| putative bacteriocin secretion protein [Burkholderia pseudomallei
           K96243]
 gi|67640672|ref|ZP_00439470.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia mallei GB8 horse 4]
 gi|121599426|ref|YP_991396.1| putative secretion protein [Burkholderia mallei SAVP1]
 gi|124385602|ref|YP_001027703.1| putative secretion protein [Burkholderia mallei NCTC 10229]
 gi|126440461|ref|YP_001060623.1| putative secretion protein [Burkholderia pseudomallei 668]
 gi|126449209|ref|YP_001082675.1| putative secretion protein [Burkholderia mallei NCTC 10247]
 gi|126454853|ref|YP_001067873.1| putative secretion protein [Burkholderia pseudomallei 1106a]
 gi|167001403|ref|ZP_02267202.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia mallei PRL-20]
 gi|167721436|ref|ZP_02404672.1| secretion protein, putative [Burkholderia pseudomallei DM98]
 gi|167740404|ref|ZP_02413178.1| secretion protein, putative [Burkholderia pseudomallei 14]
 gi|167817620|ref|ZP_02449300.1| secretion protein, putative [Burkholderia pseudomallei 91]
 gi|167826022|ref|ZP_02457493.1| secretion protein, putative [Burkholderia pseudomallei 9]
 gi|167847509|ref|ZP_02473017.1| secretion protein, putative [Burkholderia pseudomallei B7210]
 gi|167896097|ref|ZP_02483499.1| secretion protein, putative [Burkholderia pseudomallei 7894]
 gi|167904483|ref|ZP_02491688.1| secretion protein, putative [Burkholderia pseudomallei NCTC 13177]
 gi|167912745|ref|ZP_02499836.1| secretion protein, putative [Burkholderia pseudomallei 112]
 gi|167920705|ref|ZP_02507796.1| secretion protein, putative [Burkholderia pseudomallei BCC215]
 gi|217424769|ref|ZP_03456266.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia pseudomallei 576]
 gi|226198261|ref|ZP_03793832.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia pseudomallei Pakistan 9]
 gi|237814008|ref|YP_002898459.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia pseudomallei MSHR346]
 gi|242316941|ref|ZP_04815957.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia pseudomallei 1106b]
 gi|254174877|ref|ZP_04881538.1| putative secretion protein [Burkholderia mallei ATCC 10399]
 gi|254180463|ref|ZP_04887061.1| putative secretion protein [Burkholderia pseudomallei 1655]
 gi|254190444|ref|ZP_04896952.1| putative secretion protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254201408|ref|ZP_04907772.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia mallei FMH]
 gi|254206750|ref|ZP_04913101.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia mallei JHU]
 gi|254258025|ref|ZP_04949079.1| putative secretion protein [Burkholderia pseudomallei 1710a]
 gi|254300698|ref|ZP_04968143.1| putative secretion protein [Burkholderia pseudomallei 406e]
 gi|254357239|ref|ZP_04973513.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia mallei 2002721280]
 gi|52211115|emb|CAH37103.1| putative bacteriocin secretion protein [Burkholderia pseudomallei
           K96243]
 gi|121228236|gb|ABM50754.1| putative secretion protein [Burkholderia mallei SAVP1]
 gi|124293622|gb|ABN02891.1| putative secretion protein [Burkholderia mallei NCTC 10229]
 gi|126219954|gb|ABN83460.1| putative secretion protein [Burkholderia pseudomallei 668]
 gi|126228495|gb|ABN92035.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia pseudomallei 1106a]
 gi|126242079|gb|ABO05172.1| putative secretion protein [Burkholderia mallei NCTC 10247]
 gi|147747302|gb|EDK54378.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia mallei FMH]
 gi|147752292|gb|EDK59358.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia mallei JHU]
 gi|148026303|gb|EDK84388.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia mallei 2002721280]
 gi|157810523|gb|EDO87693.1| putative secretion protein [Burkholderia pseudomallei 406e]
 gi|157938120|gb|EDO93790.1| putative secretion protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|160695922|gb|EDP85892.1| putative secretion protein [Burkholderia mallei ATCC 10399]
 gi|184211002|gb|EDU08045.1| putative secretion protein [Burkholderia pseudomallei 1655]
 gi|217392225|gb|EEC32250.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia pseudomallei 576]
 gi|225929781|gb|EEH25797.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia pseudomallei Pakistan 9]
 gi|237504151|gb|ACQ96469.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia pseudomallei MSHR346]
 gi|238521438|gb|EEP84889.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia mallei GB8 horse 4]
 gi|242140180|gb|EES26582.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia pseudomallei 1106b]
 gi|243062817|gb|EES45003.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia mallei PRL-20]
 gi|254216714|gb|EET06098.1| putative secretion protein [Burkholderia pseudomallei 1710a]
          Length = 422

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 52/401 (12%), Positives = 127/401 (31%), Gaps = 58/401 (14%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +  G +  +  +V++ +  +G++ K  V  G  + +G  L T                 
Sbjct: 59  TTVDGVLTPDTGLVKVYAQQTGVVLKKNVVEGQHVTRGQVLYTVST-------------- 104

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                D+   A    +  L++   +  ++  +  +         
Sbjct: 105 ---------------------DLQSAAAGQTQAALIEQAQQRKTSLQQELDKTRRLQQDE 143

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                +++ S+      ++++ +  R   S      +    L  ++ +S++   Q++  +
Sbjct: 144 RDTLQSKIASLRTELAGIDDQIAAQRTRASIAADAASRYAGLLAQDYISKDQAQQRQADL 203

Query: 224 YKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                +L   + ++ +  + + E  ++    +L+  N L +I R +    RT  +  +K 
Sbjct: 204 LDQRSKLNSLMRDRASTAQSLKEALNDLSGLSLKQQNQLSQIDRSVIDVDRTLIESEAK- 262

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                   +  + +P  GT            A  S PL  IVP          V    + 
Sbjct: 263 -------REFVVTAPETGTATAV-IAEPGQTADTSHPLASIVPTGAHWQAYLFVPSAAVG 314

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN---------NLQTQEYYEVIL 391
            V  G    VR+  Y   +  +++A +  I                     +  YY + +
Sbjct: 315 FVHVGDRVLVRYQAYPYQKFGQYEASVVSIARTALSAAELATSGGPAAQTASGTYYRITV 374

Query: 392 KITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +             L+ G   +     +   L + ++ P+
Sbjct: 375 ALNSQNVMAYGRAQPLQAGMALQADVLQERRRLYEWVLEPL 415


>gi|15606343|ref|NP_213722.1| hypothetical protein aq_1060 [Aquifex aeolicus VF5]
 gi|2983555|gb|AAC07129.1| putative protein [Aquifex aeolicus VF5]
          Length = 374

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 68/409 (16%), Positives = 153/409 (37%), Gaps = 55/409 (13%)

Query: 20  MTLLSIIGIIGLITWSILL---PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
                +  I+G   ++       IE +  ++   +  D +  +    SG + +   + G 
Sbjct: 6   GVFTVVALIVGFGIYAFFFIKHRIEYA-ITNAVFVKADELSYLSFRVSGKVIEVYKDLGD 64

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L   +                    + + EK  L+   +     +KA E + +
Sbjct: 65  YVKRGEALAKLDPT------------------YYELEKRTLEKKMSALLEKKKALEIKIQ 106

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +L                     ++ SL  K  ++ S+   R  L  K   +   +   +
Sbjct: 107 KL------------------EKGLHISLSAKKLKVESLKKKREALREKLLQVEEKIKLVK 148

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDEANL 253
            D    K+LF+K  + +    + +  +     E   L ++I E    ++   +  + A  
Sbjct: 149 LDWERYKSLFQKGLIPRRKFEEVDTNLKVLLHEREYLEKSIQEINTEIKRAKKGIENARN 208

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           EF   ++E+ ++L   +        ++   E+  +   +++P  G +V  +  S  +  +
Sbjct: 209 EF-KTIEELKKELSSLEEEIKSLKERIKTAEQKIKDTVLIAPFDG-VVAKRFISRGDVVR 266

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             QP   +V + +  Y+   +   +++ VK G  A VR   Y DI    F+ ++E+I P 
Sbjct: 267 AGQPAFALV-NPESFYVEVLLEETKLKGVKVGNKAYVRLDAYPDI---LFEGVVEEISPA 322

Query: 374 ISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIE-LRNGFPAEVLFT 416
            +        ++   E+ +V+ +I   +  +  ++  LR G   EV   
Sbjct: 323 SAATFALVPRDVSAGEFTKVVQRIPVKIKITKGDLSLLRVGMGGEVEIR 371


>gi|30387013|emb|CAD56185.1| MchE protein [Escherichia coli]
          Length = 424

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 63/436 (14%), Positives = 141/436 (32%), Gaps = 56/436 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + L SI+ I   + + I+      V+ SGE+      V I S     + +  V  G
Sbjct: 25  PLWLIMLGSIVFITAFLMFIIVGTYSRRVNVSGEVTTWPRAVNIYSGVQRFVVRQFVHEG 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G P+   +  ++T    +     +++   +            + D +    E  +
Sbjct: 85  QLIKKGEPVYLIDISKSTRSGIVTDNHRRDIENQLV-----------RVDKIISRLEESK 133

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  LD L K     +  F      + R+                            +   
Sbjct: 134 KITLDTLEKQRLQYTDAFRRSSDIIQRA-------------------------EEGIKIM 168

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   +N   K  ++++ L  Q  + Y+    L     + +     I  L  +   + 
Sbjct: 169 KNNMENYRNYQAKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQA 228

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A++   I +   Q       E+ K  +      +  I +   G +      +        
Sbjct: 229 ADFDNRIYQMELQRY-----ELQKELVNTDVEGEIIIRALTDGKVDSLSV-TVGQMVNTG 282

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI- 373
             L++++P + +  Y+   V    + ++  G    +R+  +   +  +F A ++ I    
Sbjct: 283 DSLLQVIPENIENYYLILWVPNDAVPYISAGDKVNIRYEAFPAEKFGQFSATVKTISRTP 342

Query: 374 ----------ISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
                      + Q+    +  +Y+VI           +  + L NG  AE     +   
Sbjct: 343 ASTQEMLTYKGAPQNTPGASVPWYKVIAMPEKQIIRYDEKYLPLENGMKAESTLFLEKRR 402

Query: 422 LAQEIIHPITDNWPKI 437
           + Q ++ P  D     
Sbjct: 403 IYQWMLSPFYDMKHSA 418


>gi|167838075|ref|ZP_02464934.1| secretion protein, putative [Burkholderia thailandensis MSMB43]
          Length = 422

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 124/398 (31%), Gaps = 52/398 (13%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +  G +  +  +V++ +  +G++ K  V  G  + +G  L T                 
Sbjct: 59  TTVDGVLTPDTGLVKVYAQQTGVVLKKNVVEGQHVTRGQVLYTVST-------------- 104

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                D+   A    +  L++   +  ++  +  +         
Sbjct: 105 ---------------------DLQSAAAGQTQAALIEQAQQRKTSLQQELDKTRRLQQDE 143

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                +++ S+      ++++ +  R   S      +    L  ++ +S++   Q++  +
Sbjct: 144 RDTLQSKIASLRAELAGIDDQIAAQRTRTSIAADAASRYAGLLAQDYISKDQAQQRQADL 203

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                +L   + ++ +     ++   EA  + +    +    L Q  R+  D    L   
Sbjct: 204 LDQRSKLNSLMRDRASA----SQALKEALNDLSGLSLKQQNQLSQIDRSVIDVDRTLIES 259

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E  RE   + +P  GT            A  S PL  IVP          V    +  V 
Sbjct: 260 EAKRE-FVVTAPETGTATAV-IAEPGQTADTSHPLASIVPTGAHWQAYLFVPSAAVGFVH 317

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN---------NLQTQEYYEVILKIT 394
            G    VR+  Y   +  +++A +  I                     +  YY + + + 
Sbjct: 318 VGDRVLVRYQAYPYQKFGQYEASVVSIARTALSAAELATSGGPAAQTASGTYYRITVALK 377

Query: 395 DLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             +         L+ G   +     +   L + ++ P+
Sbjct: 378 SQSVMAYGRAQPLQAGMALQADVLQERRRLYEWVLEPL 415


>gi|153825961|ref|ZP_01978628.1| probable secretion protein, putative [Vibrio cholerae MZO-2]
 gi|254291605|ref|ZP_04962394.1| probable secretion protein, putative [Vibrio cholerae AM-19226]
 gi|149740369|gb|EDM54505.1| probable secretion protein, putative [Vibrio cholerae MZO-2]
 gi|150422462|gb|EDN14420.1| probable secretion protein, putative [Vibrio cholerae AM-19226]
          Length = 417

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 50/429 (11%), Positives = 131/429 (30%), Gaps = 51/429 (11%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           H  S + +    +  I+ ++T              G I+    ++ +K+   GI+++   
Sbjct: 26  HGFSHRIIITSCLFIILSILTLLTFGTYTQKSYLEGVIMPSTGLIAVKASQDGIVEQVFT 85

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G Q+                                     ++  L    ++ +   +
Sbjct: 86  QEGQQVD-----------------------------------RSIGLLEINSEIFDSNGQ 110

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           S  + L   L + + +      Y             +++  + L     +    L +   
Sbjct: 111 SIHQSLKRSLQQQYDSILSQQRYEKLMSQARTDELKSKIERLKLEIQSAQQSLRLAKERT 170

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +   +     + L E   +S        +    S + L+ +   +  +++ +      A 
Sbjct: 171 ALKNESNESYRKLLESKYISDLTF----KDYLSSLVALKADEESKIMLIQQLERELVGAQ 226

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            +F    +E      +  R     + +   L  T E   I +P++G +   +   +    
Sbjct: 227 YQFDYMQQEGKVRDVELARQLDGIVQQQIELTATTEA-VIYAPVSGEVSALRI-ENGQAV 284

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            + + L+ I+P +    +      + +  ++ G +  +R   Y   +       I+++  
Sbjct: 285 SRGEVLLNIIPETTELQVELYAPSRAVGFLQTGQSVGLRIDAYPFEKFGIQTGTIKRVTK 344

Query: 373 IIS--------QQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTL 422
                       Q      +  Y VI+ +     +       L+ G         +   L
Sbjct: 345 STLSPTEIKSKDQTIRSDAETLYRVIVALNKPTITVYGREEPLKVGMKVSADVYVETRQL 404

Query: 423 AQEIIHPIT 431
            + ++ PIT
Sbjct: 405 YEWLLGPIT 413


>gi|259910177|ref|YP_002650533.1| microcin H47 secretion protein [Erwinia pyrifoliae Ep1/96]
 gi|224965799|emb|CAX57332.1| microcin H47 secretion protein [Erwinia pyrifoliae Ep1/96]
 gi|283480284|emb|CAY76200.1| Leukotoxin secretion protein D [Erwinia pyrifoliae DSM 12163]
          Length = 424

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 59/407 (14%), Positives = 134/407 (32%), Gaps = 62/407 (15%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE---DIETTDLIDLKK 100
           V+ +GEI +      + S   G++ K  V  G  I  G P+   +      +  + D ++
Sbjct: 53  VNVTGEISSYPRAANVYSSVQGVVVKQFVTAGQVIKAGAPVYQIDVSKSTHSGVVSDNQR 112

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             I +    I+   S L              ES ++  LD LGK  +  +  F      +
Sbjct: 113 RDIASQMTRIEQIISRL--------------ESNKKNTLDMLGKQKAQYTSAFQRSTDII 158

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           + +                         R  +   ++++   +    K  ++++ L  Q 
Sbjct: 159 HHA-------------------------REGIRIMKENMENYRQYQTKGLITKDQLTSQV 193

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            + Y+    L     + +     I  L  + +++ A+Y  +I +   Q      + ++  
Sbjct: 194 ALYYQQQNSLLGLSGQNEQNALQITALESQIHIQAADYDNQIYQMELQRYERQKELLN-- 251

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQI 339
                      + +   G I      +          L++I+P++     +   +    I
Sbjct: 252 ---IDAGGAIIVRALADGRIDSLSV-TVGQMVNAGDSLLQIIPNNIDHYSLVLWLPNTAI 307

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI-----------ISQQDNNLQTQEYYE 388
            +V       +R+  +   +  +F   +  I               + +D    +  YY+
Sbjct: 308 PYVNVSDRVNIRYEAFPKEKFGQFAGTVSIISKTPASPQEMMTWQGAPKDGPTASIPYYK 367

Query: 389 VILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           VI++    +       + L NG  A+     +   + Q ++ P  D 
Sbjct: 368 VIVRPEKQSVEYSGKRLSLENGMKAQSTLFLEERKIYQWMLSPFYDM 414


>gi|150024524|ref|YP_001295350.1| ABC transporter membrane fusion efflux protein [Flavobacterium
           psychrophilum JIP02/86]
 gi|149771065|emb|CAL42532.1| Probable ABC-type transport system, membrane fusion efflux protein
           component [Flavobacterium psychrophilum JIP02/86]
          Length = 452

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 70/427 (16%), Positives = 150/427 (35%), Gaps = 54/427 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIK 68
           N P       ++  + I+G+I   + LP   ++S SG +           I++  +G I+
Sbjct: 28  NRPHYKILNKIILFVSILGIII--LFLPWTQNISGSGFVTTLKPNQRPQTIQTAIAGRIE 85

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K+ ++ G  + +G  +L   +I+  D  D     ++N +  ++ +K AL+  + K     
Sbjct: 86  KWYIKEGDFVKKGDTILFISEIK-EDYFDPNL--VRNTKNQVEAKKMALESYDEK----- 137

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                        +    S  + + N     + ++       +  I  + +DLE   + L
Sbjct: 138 -------------VSSLGSQINAIENEKKLKLEQAKNKIKQSLLKIKSDSIDLEAVKTQL 184

Query: 189 R----ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR--ENIHEQKNMLR 242
           +      + S Q +   +K + +   V +  L QQE      T E +   + +E  N   
Sbjct: 185 KIANTQFIRSSQLNKEGLKPMTD---VEEKRLKQQEVEAKIITQENKFLTSKNEYINTKV 241

Query: 243 HINELYDEANLEFANYLKEISRDLE---QNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            IN +  E + + A    +    L      +       ++            I +P +G 
Sbjct: 242 EINRILAEYSEKSAKAKSDKFTALSNQYDTEAQVNKLQNQYVNYSIRNGMYYIKAPQSGY 301

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV--------R 351
           I  +         ++   ++ I+P      +   V+P  +  + KG    V         
Sbjct: 302 INRSLQSGIGETIKEGTSIVSIMPAHYEIAVETYVSPIDLPLISKGEKIRVWFDGWPTIV 361

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD-LAFSDNNIELRNGFP 410
           F  + D+    F   +  I+  IS+          Y +++   +  A     + + +G  
Sbjct: 362 FSGWPDMSYGTFGGKVIAIENFISENGK-------YRILIAPDENEAKWPKQLSIGSGAQ 414

Query: 411 AEVLFTA 417
              L   
Sbjct: 415 TIALLNT 421


>gi|260549532|ref|ZP_05823750.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter sp. RUH2624]
 gi|260407325|gb|EEX00800.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter sp. RUH2624]
          Length = 132

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 39/103 (37%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               +  +  IG++    W+    +E   + +G+++       I+S   GI+ K  V+ G
Sbjct: 23  RASLVIWIVGIGLVIFFIWAWFFQLEEVSTGTGKVIPSSKEQVIQSLEGGILTKLNVQEG 82

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
             + +G  L   +       +   +  +   +      ++ ++
Sbjct: 83  DIVQKGQILAQLDPTRFASNVGESRSLLIAAQATAALLRAEVN 125


>gi|119484294|ref|ZP_01618911.1| hypothetical protein L8106_01212 [Lyngbya sp. PCC 8106]
 gi|119457768|gb|EAW38891.1| hypothetical protein L8106_01212 [Lyngbya sp. PCC 8106]
          Length = 604

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 120/377 (31%), Gaps = 50/377 (13%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+K   + G  +  G  L   ++      ID  +  +   + ++   ++       +   
Sbjct: 145 IQKVLADEGDLVEAGEVLAVLDNSILRSQIDQAEAGLARTQANLSKLQTG--SRPEQIAA 202

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +   +    QL +           V    ++     L     R  S+         +  
Sbjct: 203 AQAKLDRANAQLAELEAGTRPEEIAVAQAKLNEAEARLAD--ARSGSLQDEIAQAVARLE 260

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQ---NDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +A L    + +   + L ++ AVS+    +  Q ER +     E +  I + +   R 
Sbjct: 261 ANKADLQLASERVNRYQKLKDQGAVSEDSLEEYLQNERRLRALVDEAQRRIQQLEQSQRS 320

Query: 244 ---------------INELYDEANLEFANYLKEISRDLEQNQRTF--------------- 273
                          + +L + A LE     +    ++  N                   
Sbjct: 321 QVDRLEATVDMERQALRQLQNGARLEEIAAARAEVAEVRSNLNELINGTRSEEIAVAIAE 380

Query: 274 -ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A+  +++   E   E  T+ +P  G I  N+     +    ++ L  I+       + A
Sbjct: 381 VAEAQAQVRYYEAQLENTTVRAPATGII-ANRVARIGDVTNGTKELFTII-AENQLELHA 438

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           KV   Q+  VK G   T+     ++++    +  + +I P+I  +           V + 
Sbjct: 439 KVPETQLSQVKIGSPVTITSDADSNLK---VQGTVREIAPLIDPESRKAT------VKID 489

Query: 393 ITDLAFSDNNIELRNGF 409
           +  L     +  LR G 
Sbjct: 490 LPPLGAISGSF-LRPGM 505


>gi|307129487|ref|YP_003881503.1| membrane fusion component of tripartite multidrug resistance system
           [Dickeya dadantii 3937]
 gi|306527016|gb|ADM96946.1| Membrane fusion component of tripartite multidrug resistance system
           [Dickeya dadantii 3937]
          Length = 378

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 58/390 (14%), Positives = 130/390 (33%), Gaps = 70/390 (17%)

Query: 37  LLPIEIS-VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
              I+ +     GE+++  +        SG +    V +G  I +   L   +D +    
Sbjct: 44  FTHIDETDARVMGEVISLASR------ESGWVTARPVIDGDAIHKDQLLAQIDDRDARLR 97

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +  ++ ++      I   ++     +           + +  L +   K  S+ S V N 
Sbjct: 98  LAEQEGNLAAADAQISYSQTQRQVTD----------LTTQASLDEARAKLASSDSAVNNA 147

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           G                                   LS  Q +      L + N  ++  
Sbjct: 148 GY---------------------------------QLSLAQNNFQRDDQLLKSNLTARKT 174

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
            ++    + +   ELRE   ++      +N    +      N L+ + R +E  ++    
Sbjct: 175 WDESHTTLLQRQSELREAEAQRHAQQAALNNAVAQ-----RNTLQVLDRQIEMQRQQRIA 229

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             +++  L++    + + SP+ G +V     +  +Y Q  Q +M +V   +  ++ A + 
Sbjct: 230 LQAQVDQLKQEIADRALRSPVDG-VVDRTIVNVGSYVQAGQWIM-LVHDPRNLWVEANIK 287

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE--- 388
              I  V+ G    ++   Y D   K F   + ++    + Q     +   +  + +   
Sbjct: 288 ETAIGRVRVGQKVDIQVDAYPD---KHFSGHVIRVGDAATNQFALLPSPNPSGNFTKITQ 344

Query: 389 ---VILKITDLAFSDNNIELRNGFPAEVLF 415
              V + + D      +  L+ G  AEV  
Sbjct: 345 RVPVRIALDDPENDSPDNRLKPGLMAEVSI 374


>gi|307257837|ref|ZP_07539594.1| hypothetical protein appser10_18220 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306863743|gb|EFM95669.1| hypothetical protein appser10_18220 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 422

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 63/427 (14%), Positives = 140/427 (32%), Gaps = 54/427 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               + LLS +  +  I + +           GEI+ + + + + +  SG I +  VE  
Sbjct: 23  PSWLVFLLSFVITVSFILYVVFGSYTRREMIMGEIVMQPHPITLSASKSGYISERYVEIN 82

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +G PL        TD  ++   SI  ++  I                         
Sbjct: 83  QPIRKGDPLFKITLDRITDSGNVGLNSINAIKTQI------------------------- 117

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                   +       +     +    +L+ ++ + R IY    D +   + +      +
Sbjct: 118 --------QKLDRVIILVKANQTETLANLEKQIAKNRKIYS---DTQKYFAEVTKSTEDY 166

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            + L   + L +K   + +++   +R  Y     LR ++ E    L            E 
Sbjct: 167 YQTLKKYEELMKKGYSANDEV-ALQRSRYFDQKSLRNSLQE---KLIQQESAIISLENEV 222

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            +   +    + + +    D   +L   E +  +  + +P+ G +      +     ++ 
Sbjct: 223 ESRKTDFQNQIIRYELQQNDLEIRLMEFE-SVSELIVNAPLDGLVESVSV-TVGQVIREG 280

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
             L +++P +     +   V    I  +       +R+  +   +  +F+  I+ I  I 
Sbjct: 281 DTLAQMIPANKGEYQLVMWVPNSAISFINPEDKLNIRYEAFPFEKFGQFEGSIKHISTIP 340

Query: 375 SQQDN---------NLQTQEYYEVILKITDLAFSDNNIEL--RNGFPAEVLFTAKNTTLA 423
           +                    Y++++ I D     NN  L   +G  AE     +N  L 
Sbjct: 341 ASLQELAFYKNIPAADPNNPLYKIVVAIADQKVEYNNTSLAFLSGMKAEATLFLENRKLY 400

Query: 424 QEIIHPI 430
           + I+ P+
Sbjct: 401 EWILFPL 407


>gi|311747011|ref|ZP_07720796.1| putative HlyD family secretion protein [Algoriphagus sp. PR1]
 gi|126578711|gb|EAZ82875.1| putative HlyD family secretion protein [Algoriphagus sp. PR1]
          Length = 450

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 58/411 (14%), Positives = 133/411 (32%), Gaps = 53/411 (12%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M    K +         L++I+ I   + W+  +  +  V++   +  E     I S  +
Sbjct: 23  MTLPEKESQKRIKLLAWLIAIVFISLFLPWTQSIRSKGYVTA---VKPEQRAQTIHSIIA 79

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+K+ V  G+ + +G  +L   +I+      +    +   +  +D +  +++    K 
Sbjct: 80  GRIEKWYVSEGAFVSRGDTILRISEIKDEYFDSML---LPRTQMQVDAKSLSVEAYKEKV 136

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L+   ++  E   + + K     +K+    +     S+K +                 
Sbjct: 137 GALQAQLQALRE---NNVLKIQQAENKLKMAELKVQSDSIKFQQA--------------- 178

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-------NIHEQ 237
               +      QK L   + L+ +   S  DL  +         +L         + +E 
Sbjct: 179 ----KVNFDIGQKQLDRAEQLYAEGLRSLTDLESRRLKFQDVQAKLLSVENDYLISQNEM 234

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLE---QNQRTFADEMSKLTILEKTREQKTILS 294
                 +N + +E   + A    EI   +      + +     ++ +  E     + IL+
Sbjct: 235 ITARIDLNTIDNEFRDKIAKTRSEIYTAMSSQYDAEASTTKLENQYSNYEARTGFRYILA 294

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT----- 349
           P  G +            ++ + ++ I+P      +   V P  +  +K G         
Sbjct: 295 PQDGYLAKAIQVGIGETIKEGEQILNIIPSETDLAVEMYVQPVDLPLIKTGNKVRFIFDG 354

Query: 350 ---VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
              + F  +  I    F  ++  ID      +        Y V++      
Sbjct: 355 WPAIVFSGWPKISNGTFGGVVIAIDQYAGTNNQ-------YRVLVAQDPEE 398


>gi|332709037|ref|ZP_08429007.1| RND family efflux transporter, MFP subunit [Lyngbya majuscula 3L]
 gi|332352226|gb|EGJ31796.1| RND family efflux transporter, MFP subunit [Lyngbya majuscula 3L]
          Length = 553

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 59/385 (15%), Positives = 134/385 (34%), Gaps = 72/385 (18%)

Query: 40  IEISVSSSGEILNEDNVV-EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           ++I + ++G+I  + N   ++ +P  G + K  V+ G ++ +G  +     +E  +L   
Sbjct: 70  LDIGIQTTGQIETQPNQQAQVTAPIPGTVAKLLVKPGQRVKKGQAVAVISSLELIELRVE 129

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
               +   +  +   ++ L+        L +    R+ Q+                   +
Sbjct: 130 SLDRLTEAKATLGEAQANLE--------LARENLERQRQIA------------------A 163

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +     + +L   +  Y   L L  + +L R  +   +  L   K L ++ A S+ ++ +
Sbjct: 164 AEIDEAETQLAVAQEEYDKDLALAIEGALARRQMLESKTKLAEAKTLLKR-AFSRREVLE 222

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E               E K     +        L    Y                  + 
Sbjct: 223 AE--------------AELKRAQTAVKAAKSRVQLSDTTYK---------------TRLQ 253

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +L+     + + T+L+PI+GT+   +     ++      LM IV ++   +  A +  K 
Sbjct: 254 QLSNSANEQGKVTVLAPISGTVAQWKLTLGESFEDAGGQLMTIV-NNNQVWATANIYEKD 312

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           +  VK G    +      +     F   + +IDPI++ Q             +    +  
Sbjct: 313 LYKVKIGQKVRLEVSSLPNQT---FTGQVTQIDPIVAGQT-----------RVVPVRVKL 358

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLA 423
            +   +L+ G  A++      T++A
Sbjct: 359 DNPGGQLKPGMFAQLNILTDKTSVA 383


>gi|307944846|ref|ZP_07660184.1| HlyD family secretion protein [Roseibium sp. TrichSKD4]
 gi|307772060|gb|EFO31283.1| HlyD family secretion protein [Roseibium sp. TrichSKD4]
          Length = 193

 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 63/172 (36%), Gaps = 3/172 (1%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            + K   ++  +G+I +  W+    I+I    SG ++       ++    GII++  V  
Sbjct: 9   RAHKLFVVIVALGLIAVFAWAQFTQIDIVTRGSGRVVPSLQNQFVQHLEGGIIREILVRE 68

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAF 131
           G  + +G  LLT  D  +    +  +  + + +     ++ E   L  L    D++    
Sbjct: 69  GQFVKKGDVLLTIRDPFSRAEYEKAQKLLLSRQAELVRLEAESQNLPVLEFSQDMINAVP 128

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +   ++   F  +  S   +           + K K  R+    ++     N
Sbjct: 129 DVVADERDLFNSRQQSLEQQHLILEDHDAQGAGKQKGNRLEHQMIHLRRARN 180


>gi|238793086|ref|ZP_04636715.1| Microcin H47 secretion protein mchE [Yersinia intermedia ATCC
           29909]
 gi|238727686|gb|EEQ19211.1| Microcin H47 secretion protein mchE [Yersinia intermedia ATCC
           29909]
          Length = 424

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 56/449 (12%), Positives = 133/449 (29%), Gaps = 61/449 (13%)

Query: 6   WKNLKRNHPA-SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           W+      P   +  +        +  + + I       V+  GEI      V + S   
Sbjct: 14  WRGRAILLPGIPVWLVGGFCTFFFVAFLAFIIAGTYTRRVNVGGEITTYPRAVSVYSGVQ 73

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V  G  + +G P+   +  ++T    +     + +   ++   + +  +    
Sbjct: 74  GFVVRKFVTEGYIVKKGDPVYLIDISKSTRSGVVSDNQRQGIEHQLERIGNIISRIEISK 133

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                + E ++ Q      +  +  +K                                 
Sbjct: 134 KTTLNSLEKQKIQYTAAFKRSSAIINKA-------------------------------- 161

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  +   + ++   +    K  ++++ L  Q  + Y+    L     + +     I
Sbjct: 162 ----EQGIKIMKDNMDNYRRYQIKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNSLQI 217

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             L  +   + A +   I   +E  + T  +E+    +      +  + +   G I    
Sbjct: 218 INLESQIQTQSAEFDNRIY-QMELQRYTLQNEL----VNTDAGGEIIVRALSDGQIDSLS 272

Query: 305 SFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +          L++I+P         I   V    I ++  G    VR+  +   +  
Sbjct: 273 V-TVGQMVNVGDSLLQIIPELISHYSLVI--WVPNDAIPYITIGDKVNVRYEAFPAEKFG 329

Query: 362 KFKAIIEKID--PIISQQDNNLQTQ---------EYYEVILKITDLAF--SDNNIELRNG 408
           +F   +E I   P   Q+    Q            YY++I++            + L NG
Sbjct: 330 QFAGTVEVISKTPASPQEMMTYQGAPKNTQAASIPYYKIIVRPEQQTVFYDGKRLSLENG 389

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
             A+     +   + + ++ P  D     
Sbjct: 390 MKAQSTLFLEKRKIYEWMLSPFYDMKHSA 418


>gi|281424552|ref|ZP_06255465.1| putative hemolysin secretion transport system membrane protein
           [Prevotella oris F0302]
 gi|281401389|gb|EFB32220.1| putative hemolysin secretion transport system membrane protein
           [Prevotella oris F0302]
          Length = 437

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 50/391 (12%), Positives = 136/391 (34%), Gaps = 28/391 (7%)

Query: 47  SGEILNEDNV--VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           SG+I+         +K+ F+G + +  V++G  +     L    D  +   +D     +K
Sbjct: 57  SGKIVLTSQTPPTLLKTNFNGRLSELYVKDGQHVKANQRLALMYDAASIQDMDELSQFLK 116

Query: 105 NLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            L+          L     K  +++  F +   Q+ ++                  +   
Sbjct: 117 ELKQATSLGVVCNLPVSTLKLGIIQDNFSALTVQVEEYNRFIKYNY----------ISAR 166

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +K K   + +  +  +    + S+ +      +K       L+++  +S  +  + +  +
Sbjct: 167 IKAKEKLLNTNKIQEIIGAKQLSIAKEQYLLQKKSHARNATLYQRGLISSEEYEKTKIEL 226

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           ++     + ++      +  I    ++   E     ++ S  L          + +L  L
Sbjct: 227 FQQ----QSHLESMHTNITDITYSKEQLLSEILELQQDYSEKLNTLTMNIQANIERLLSL 282

Query: 284 EKTRE-QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQH 341
            +T E +  ++SPI G + +   ++++   +  + +  I+P +K+  + +  +  + +  
Sbjct: 283 IRTWEIEHLLISPIDGVVTFTNYWAANQNVEAGKTVFSIIPLNKVAILGKVNLPVQGVGK 342

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD--LAFS 399
           VK G    V   +Y      +    +++I  I    +        Y   ++         
Sbjct: 343 VKIGQKVHVYLDNYPKNEFGQIDGKVKRISLIPDATNE-------YVAEIQFPHGLKTTY 395

Query: 400 DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              +              ++T L +++  PI
Sbjct: 396 GKTLPRSQNMTGNADVIVEDTRLIEQLFLPI 426


>gi|16329980|ref|NP_440708.1| hypothetical protein slr1207 [Synechocystis sp. PCC 6803]
 gi|1652466|dbj|BAA17388.1| slr1207 [Synechocystis sp. PCC 6803]
          Length = 514

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 55/399 (13%), Positives = 132/399 (33%), Gaps = 31/399 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +   P+E+ + +SG +      V I     G + +  VE G  + +G  +   E+ E   
Sbjct: 53  ATESPLEVEIKASGTVQP-QQTVNISPKAPGRLVRLFVEQGDVVKKGDRIAVMENQEFFA 111

Query: 95  LIDLKKVSIKNLRCHIDTEK----SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                +  ++      +  +    + +D L  + +         + QL     +     S
Sbjct: 112 DGKQSEARLREAIARYEQARIRIPAEIDQLRAQVNQGRTRIAQAQSQLASAQARLEQAQS 171

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN- 209
           ++    I  +   +    +R++     R    N+S L    ++  Q D    + L  +  
Sbjct: 172 RI-PSNIDQLRAQVASAESRLKLAENRRN--RNQSLLQEGAITQDQYDELSNEFLNAQAG 228

Query: 210 -AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
              +Q+ LN           ++ + I + +  +    +       +          +L  
Sbjct: 229 LFEAQSRLNNARTTASPEVGQIEQEIVQLQGAIAEAEQGVAAQMAQLRERQGTAETELAT 288

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA--------QQSQPLMK 320
            Q   +   ++L   +   E   I++P  G I   +  +  ++           S     
Sbjct: 289 LQAAASQAEAQLMRSKIAYEDTFIVAPFDGIITQ-KFATVGSFVTPTTSASSTASATSTS 347

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           IV  ++   + A+V    I  ++ G    +    + +     F   + ++ P    ++N 
Sbjct: 348 IVALAQGLEVVARVPEVDISALRPGQMVDIVADAFPNET---FTGRVIRVAPEAIVENNV 404

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 +EV +       +    +LR+    +V+F    
Sbjct: 405 TS----FEVTI-----GLATGQEQLRSKMNVDVVFKGDR 434


>gi|124026807|ref|YP_001015922.1| leukotoxin secretion protein-like protein [Prochlorococcus marinus
           str. NATL1A]
 gi|123961875|gb|ABM76658.1| leukotoxin secretion protein-like protein [Prochlorococcus marinus
           str. NATL1A]
          Length = 376

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 91/269 (33%), Gaps = 12/269 (4%)

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
            L +   I + +  LE K+ ++   +         ++ + ++  V + D  ++ +I+   
Sbjct: 109 ALAKTEEIVIAQGKLEPKTGVIEVQMP--------LEGITKEILVKEGDRVEKGQILIHL 160

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             E+ E           IN+   +     +           Q      +  +KL   E  
Sbjct: 161 DTEITEANQISLIETLKINQEILDNLKYLSEEGAASRIQYLQQSNKVQEIKTKLKENEVQ 220

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            + + I+SP+ G +   Q       A+ S+P++K+VP         ++    I  +  G 
Sbjct: 221 MKYQKIISPVNGIVFDMQPKGPGYVARTSEPILKVVPLD-KLQAEIEIDSSDIGFISLGK 279

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNI 403
              +    +        +  I +I       D  +     +  I+K+        S   +
Sbjct: 280 DTDISIDSFPSSDFGVVEGKIIRIGSDALPPDPRINKGYRFPAIIKLNQQNLILKSGKTL 339

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
            L+ G         +  +  Q +++  +D
Sbjct: 340 PLQAGMSITANIKLRKVSYLQLLLNNFSD 368



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 12/158 (7%)

Query: 15  ASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
                    ++IG     I W  L   E  V + G++  +  V+E++ P  GI K+  V+
Sbjct: 87  KFWAEAITWTLIGGTSFGIAWLALAKTEEIVIAQGKLEPKTGVIEVQMPLEGITKEILVK 146

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +G  L+  +           +++  N    I+T K   + L+N   + E+   S
Sbjct: 147 EGDRVEKGQILIHLD----------TEITEANQISLIETLKINQEILDNLKYLSEEGAAS 196

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           R  Q L    K     +K+    +   Y+ +   +  +
Sbjct: 197 R-IQYLQQSNKVQEIKTKLKENEVQMKYQKIISPVNGI 233


>gi|227538081|ref|ZP_03968130.1| multidrug resistance efflux pump [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227242157|gb|EEI92172.1| multidrug resistance efflux pump [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 364

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 121/377 (32%), Gaps = 70/377 (18%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + N+  I     G + K  V++   + +G  L T E  +    +   + ++   +  ++
Sbjct: 48  VDKNMSPIIPRVGGYVSKVFVKDNDIVKKGDTLFTIEPQDYLVKVQEAQAALLAAKSSLE 107

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             K+ +   +    + + + +S    +     K  +  +       S++Y +  +   + 
Sbjct: 108 VSKADVFASSANVAISDASIKSNVGSVDA--AKIRAEQANNDYVRYSNLYNNHSITKQQY 165

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                 +L+ E +                              ++ QQ+R    S    +
Sbjct: 166 EQALTAKLEAEKQ-----------------------------VEILQQQRNASAS----Q 192

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            N    K  +        +AN+E A  +                    L     +    T
Sbjct: 193 RNAVVSKTTVASKQTSVAQANIERAKAV--------------------LDAANLSLSYTT 232

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           +L+ + G +   +           Q L  IV +S+   + A     Q+  ++ G   T++
Sbjct: 233 VLASVDGQVSNIKI-QPGQMINPGQSLFYIVDNSETWVV-ANFKETQLNKMRPGQKVTIK 290

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDN 401
              + D    +F+  I    P    +      +  T  + +      V +++TD   +D 
Sbjct: 291 VDAFPDT---EFEGEINSFSPATGSRFSLLPPDNATGNFVKTVQRLPVKIRLTDKNTTDK 347

Query: 402 NIELRNGFPAEVLFTAK 418
              LR G  A+V    K
Sbjct: 348 IALLRPGMNADVDVHVK 364


>gi|108758921|ref|YP_630036.1| HlyD family secretion protein [Myxococcus xanthus DK 1622]
 gi|108462801|gb|ABF87986.1| HlyD family secretion protein [Myxococcus xanthus DK 1622]
          Length = 405

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 61/409 (14%), Positives = 130/409 (31%), Gaps = 51/409 (12%)

Query: 21  TLLSIIGIIGLITWSILLPIEIS-VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             L ++   GLI WS+   + +   SS   I   + V  I+ P +G +    ++   ++ 
Sbjct: 23  VALMVLCAGGLIAWSLFAKVPLVKASSQARIEPHNAVHRIEPPSAGRVVLSLLKLDQEVK 82

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L+ F+       ++    ++      +   +  +   + +  +  +  E   ++ L
Sbjct: 83  EGDLLIEFDARAERLELERSNATLAATEKELAIIRQQITNKHEEAALTARVDEVAVKEAL 142

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                    + +L     + + R +L  KS              
Sbjct: 143 -----------------------GREQELAPRHRLAVERAELAFKSPA------------ 167

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                     AVS+ +  + ER      L   +    Q   L  +    +      A  L
Sbjct: 168 ---------GAVSEME--KLERTTDVDALRFAQT--AQGLALIRLRREQNVRRQALAAQL 214

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E+ R+    +    +    +  LE   E+K   +P  G +V      S  +    Q + 
Sbjct: 215 LELEREALGAEGRIRELQGTIDRLEYQIERKLYRAPATGHLVDVAELGSGAFIADGQRVG 274

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IV  +    +RA+   + +  ++ G TA ++   Y         A +  +     Q   
Sbjct: 275 TIVASNAEVRVRARFPKEVVGLIQPGQTARLKLDGYPMTIYGTVPARVTAVGTEPGQTAT 334

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                    V +++      D  I+LR+G    V       +    ++ 
Sbjct: 335 PEAIPG--TVRVELKFAPPDDPRIQLRHGMTLSVEVEVARASPVALLMR 381


>gi|182418778|ref|ZP_02950047.1| putative secretion protein HlyD [Clostridium butyricum 5521]
 gi|237668484|ref|ZP_04528468.1| secretion protein HlyD family protein [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182377377|gb|EDT74936.1| putative secretion protein HlyD [Clostridium butyricum 5521]
 gi|237656832|gb|EEP54388.1| secretion protein HlyD family protein [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 384

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 56/390 (14%), Positives = 119/390 (30%), Gaps = 56/390 (14%)

Query: 41  EISVSS-SGEILNEDNVVE----IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           +  V+  S  ++ + N+      + S   G I +  V  G  + +G  L+  +       
Sbjct: 32  DQIVAGNSNNLVIQSNIKMDESNVNSLTGGQISEVLVSEGDTVTKGQALVALDC------ 85

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                         +  +K+  +    +    +   E+ + Q    L K  +  S+    
Sbjct: 86  ------------DSLLAQKAQAEAGVEQAKAGKTQAEAGKAQAEAALQKAKNGASQEELN 133

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            + S        +   +S Y                    + +    K L++  A SQ +
Sbjct: 134 QLKSAIDIANSNVESAQSAY-----------------DVAKTNYDRTKTLYDSGAASQAE 176

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD----LEQNQR 271
           L  +E  +  +   L              N+    A  E     +         ++Q Q 
Sbjct: 177 LEGKEVNLQSAQTALDNAKSNVDINQEKYNKAVKGATAEEIAQAQAAVDQAQAGIDQAQA 236

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 + +  LE T E+ +++SP+ G +         +      P + +   +    I 
Sbjct: 237 GVEQAEASVKQLEITLEKCSLVSPVDGVVTTLNV-KDGDLVSSGMPAVVVTAINNP-SIT 294

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEY--- 386
             +    +  V       ++ P Y     ++FK  +  I  +   + +       ++   
Sbjct: 295 CNIKETDLDKVDLDQEVKIKLPAY---EGQEFKGRVTNINKNADFATKKATNDNGDFDIL 351

Query: 387 -YEVILKITDLAFSDN-NIELRNGFPAEVL 414
            Y V ++  DL    N  I LR      V 
Sbjct: 352 SYGVKVEFDDLEELKNMGINLRANMTTFVD 381


>gi|312136145|ref|YP_004003483.1| efflux transporter, rnd family, mfp subunit [Caldicellulosiruptor
           owensensis OL]
 gi|311776196|gb|ADQ05683.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           owensensis OL]
          Length = 543

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 63/402 (15%), Positives = 131/402 (32%), Gaps = 39/402 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ ++  SG + + +    I S  +G ++K  V+NG  + +G  +   +D + T  I+  
Sbjct: 55  LKQTLLVSGIVQSSNTRNAI-SKVNGSVRKVFVKNGQYVKKGDLIAQIDDTQATAKIESL 113

Query: 100 KVSIKNLRCHID---------TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           K  +  L    +         T KS  D       V E    ++  Q++  +       +
Sbjct: 114 KRQLLELELQKESLEKQFQNFTLKSPQDGFVQNLSVQEGLLVNQGMQIMTIVDDSKMKMT 173

Query: 151 KVFN----------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             F             +      +   +        NRL     + L   +         
Sbjct: 174 VQFPAWCYGKVKKGQKVDVAISEIISTVEGTIEDISNRLYKNQDNILGFDVKVFLHNRNG 233

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL- 259
           +     +  AV      ++   + +  LE          +   I +++ E   +  +   
Sbjct: 234 VFLEGTKAGAVLNLSGGEKVMSLGEGVLEAFSKKTVLSPVTGKIEQVFVENGQKVKSGQV 293

Query: 260 ------KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                 ++I R L+Q      D  S++   EK  +   I+SPI G IV        +   
Sbjct: 294 LLRFSSEDIERQLKQIDLKIEDVKSQIEETEKELKNFRIISPIDGKIVDLNL-QEGDIVT 352

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q +   V   +   I A+V    I  +K G  A V+       + K  +  +++I   
Sbjct: 353 AGQLICS-VFDPENLVIAAQVEELDILKIKPGQKAEVKLDAVPGTKVKPAEGYVDEIS-- 409

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             ++     +   + V ++  +            G  A+   
Sbjct: 410 --EKAQGESSISKFIVKIRFKNPGSVKF------GMHADAEI 443


>gi|320104760|ref|YP_004180351.1| biotin/lipoyl attachment domain-containing protein [Isosphaera
           pallida ATCC 43644]
 gi|319752042|gb|ADV63802.1| biotin/lipoyl attachment domain-containing protein [Isosphaera
           pallida ATCC 43644]
          Length = 520

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 53/402 (13%), Positives = 133/402 (33%), Gaps = 40/402 (9%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVE 73
            +++     + +I    +  L P    +   G +      +    I++P SG++ K+ V 
Sbjct: 80  ARQLGWWMGLILIAFPLFLALTPWIQVIEGQGRVAAFGPLERRFNIEAPISGVVVKWHVT 139

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            GS++  G  L T  + +   +  L++     +R     ++                   
Sbjct: 140 EGSEVKVGDLLATLSNNDRQFVEALEEQKQAIIRERDTAQRE------------------ 181

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                +DF     +   KV    +++  +S++    ++ ++       E K    +A+  
Sbjct: 182 -----VDFYETIIADTRKVMEAAVAAAEKSVEATEQKVEAV-------EKKVEAFQAVYV 229

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           +        K+      V+  +L+  E    +S  ++ E   E K+    +         
Sbjct: 230 ADFSRFRRFKDTGATGVVAPLELDIAEGKARESRAKVEEAKAELKSSEADLAAKRAFLEE 289

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTR------EQKTILSPIAGTIVYNQSFS 307
             A    E+ + L + Q+  A   +K   L+         E + + +   G I       
Sbjct: 290 TRAKMNAEVQKALVEQQKAIAKVEAKNKELQDVLVKIRQQENREVRAVRNGRIFRILVNE 349

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI- 366
                ++ +PL +++P +    +   V       +  G    ++F  +   +   + ++ 
Sbjct: 350 QLMQVKEGEPLAQLIPETDQPAVELWVAGNDAPLIHLGDPVRLQFEGWPAAQVVGWPSVA 409

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           +      +   D        + +++   +         LR G
Sbjct: 410 VGTFAGEVKVIDTADDGMGRFRIVVVPAEGESWPEARYLRQG 451


>gi|229065303|ref|ZP_04200582.1| hypothetical protein bcere0026_53420 [Bacillus cereus AH603]
 gi|228715953|gb|EEL67690.1| hypothetical protein bcere0026_53420 [Bacillus cereus AH603]
          Length = 398

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 54/412 (13%), Positives = 142/412 (34%), Gaps = 36/412 (8%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W+ +  ++I    +  I ++ ++   ++   G++    V++G  + +G  LL  ++ E
Sbjct: 1   MIWAYVGKVDIVSKGTATIQSKSDISVSRTQIPGVVDTVSVKSGDAVKKGDTLLQLKNQE 60

Query: 92  T---TDLIDLKKVSIKNLRCHIDTEKSALD-----FLNNKYDVLEKAFESREEQLLDFLG 143
           +    + +D     ++  +  ++  K ++      F +     + + +++ E+       
Sbjct: 61  SMDKQNQMDQIVKHLEGQKEMLEQLKKSIKSHKLYFTDEVDKKIREEYKAYEQGYQSLQN 120

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-------RLDLENKSSLLRALLSSHQ 196
           +  +  + + N  +S+    +   L   +            + D EN     + +L    
Sbjct: 121 EKENEVNVIGNSKLSNEQDEILQGLIAEKENIQREIKSINKQKDKENILDEQKQVLDDKI 180

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           + L   +N  EK    +      ER    +T E      +QK     +N+  + A +   
Sbjct: 181 QSLESQQNNIEKRIAQRKGTLDSERKKVDTTKE-----GKQKQKEYALNQYRESAIVSVN 235

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             ++ + ++          +   L+ L    E   I +   G + +       +     Q
Sbjct: 236 QRIQSLEQE-------IFIKKQDLSGLHNQNETMIIKAHQDGVVQFPSILQPGDLIDSGQ 288

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            ++ I+P      ++  ++ ++I+ +KKG         +   +  K    +  I      
Sbjct: 289 EVVSIIPKEDEKRVKILLSAQEIRGIKKGDKVQ---YSFKLNKTDKQMGKVTYISAH--P 343

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
             +       YE+   I          EL  G   +         + + I+ 
Sbjct: 344 IFDKDSKGYVYELEATIEKQVLY----ELHTGMVGKASVVTGEEQIWKFILR 391


>gi|289664878|ref|ZP_06486459.1| membrane-fusion protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 356

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 111/329 (33%), Gaps = 43/329 (13%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL-LTFEDIETTDLIDLKKVSI 103
           + +G+++    +  + +P +G++ +  V  G  +  G  L +      T    D +    
Sbjct: 56  TVTGQLVPIKGLATVMAPATGVVSRLDVSEGQPVKAGQILGVVTVPRATLGSGDTQAALQ 115

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             LR   +  KS+                                  +     + +  + 
Sbjct: 116 HQLRQRGEGLKSS---------------------------------EQAQLQQLDAQEQG 142

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L  +L  +R      + ++ + +  R  ++   + L   + L +   VS   + QQE   
Sbjct: 143 LHAQLANLRQ---ELVQVDAEIATRRNQIALANEVLQRWRQLQDDKYVSVLQIKQQESSA 199

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            + T +++    +   M R   ++  +  +            ++ + R  A  + +  + 
Sbjct: 200 LEYTSQMQALQRQATEMRRSAAQIEQQLRVLPGQ-----RGGVQADYRRDAAAVEQEQVQ 254

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            +      + +P+AG +V  Q        Q  QPL+ +VP          V  + I  + 
Sbjct: 255 TQVNGALVVTAPVAG-VVATQMAKPGQAIQLGQPLLSVVPGDGRLEAELLVPSRAIGFIA 313

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDP 372
            G T  +R+  +   +    +  + +I  
Sbjct: 314 PGDTVLLRYQAFPYQKFGHQQGRLSRISR 342


>gi|220931102|ref|YP_002508010.1| efflux transporter, RND family, MFP subunit [Halothermothrix orenii
           H 168]
 gi|219992412|gb|ACL69015.1| efflux transporter, RND family, MFP subunit [Halothermothrix orenii
           H 168]
          Length = 481

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 63/388 (16%), Positives = 131/388 (33%), Gaps = 55/388 (14%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V + G +  E++  +IK   SG++++  +E G ++ +G  ++  +     D ++L ++S+
Sbjct: 52  VLADGNVTFENDR-DIKVKVSGLVERVYIEEGDEVAEGEKIIKIDGDPLRDNLELARLSL 110

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           K    + +T                         L+    K              ++  +
Sbjct: 111 KEASKNYET-------------------------LVSNFKKQDKINELKLKEARQNLELA 145

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                    S+      L++K    +  L   +K+    K LF+  AV++  +   E+  
Sbjct: 146 RLSLNKEKESLEYKLKTLQDKIDDAKKALDEARKEWEKQKYLFQNKAVAEKAVKNAEKAY 205

Query: 224 YKSTLELRENIHEQKNMLRH-INELYDEANLEFANYLKEI-------------SRDLEQN 269
             +     +   E K + +  I    + ANLE       +               DLE  
Sbjct: 206 QTAQDNYEDLKEELKYLEQKTIPRTIELANLEVGKAENSLELLKNSLEKSNITENDLELA 265

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +         +  +++   +   L+PI GTIV  +        +    + KI    +   
Sbjct: 266 RIKIDRAKKNIADIKEDLNRLETLAPITGTIVSLEIREGDKVVE-GTTVGKIA-DLESLL 323

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I   V    +  V  G + T+    + D    K    + KIDP+ ++  N  +    Y  
Sbjct: 324 IEVMVDEVDVNEVAVGQSVTLTSDSFED----KLTGEVIKIDPVATKVGNLNK----YRT 375

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTA 417
            + ++D         L+ G         
Sbjct: 376 QIVVSDPEGV-----LKPGMFVNAEIVT 398


>gi|146295582|ref|YP_001179353.1| RND family efflux transporter MFP subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409158|gb|ABP66162.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 549

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 63/407 (15%), Positives = 134/407 (32%), Gaps = 37/407 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ ++  SG + +      I S  +G +++  V+NG  + +G  +   +D +    I+  
Sbjct: 55  LKQTLLVSGIVQSSSTRNVI-SKVNGTLERVFVKNGQYVKKGDLIAKIDDSQAVFKIEAL 113

Query: 100 KVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           K  + +L    +  +  L    L +  D   +   + E  L+    +  +          
Sbjct: 114 KRQLLDLELQRENFRRELQNFTLKSPQDGFVQNLTTSEGMLVSQGMQIMTIVDDSKMKLN 173

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN--- 214
                    K+ R +   +  +DL +K   +   L S          +F+   V  N   
Sbjct: 174 VQFPAWCYGKVKRGQKAEVVVVDLMDKVDGVIEGLGSRIYKNQDGTMVFDAKVVVSNKNG 233

Query: 215 ------------DLNQQERIVYKSTL--ELRENIHEQKNMLRHINELYDEANLEFAN--- 257
                        L   E+++  S    E+         +   I +++ E   +      
Sbjct: 234 SLTEGMRASVSLKLLNGEKVISLSEGILEVFSKKSIVSPVSGRIEKVFVENGQKVKTGSL 293

Query: 258 ----YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                  E+   ++Q      D  S++   E   +   +L+PI G I         +   
Sbjct: 294 LLKFSTDEVEMQIKQLDLKIEDIKSQIKAAEDDLKNYEVLAPIDGKIADLNL-QDGDVMT 352

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q +   V   K   I A+V    I  +K G    ++       R +  +  + +I   
Sbjct: 353 VGQMICS-VYDPKHLAISAQVEELDILKIKPGQKVNIKLDAVGSTRNRPLEGYVAEISEK 411

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                N   ++  + V ++       +NN  ++ G  AE     K+ 
Sbjct: 412 AQLDSNGSVSK--FVVKIE------FENNSNIKIGMHAEAEIILKSK 450


>gi|149920020|ref|ZP_01908494.1| secretion protein HlyD [Plesiocystis pacifica SIR-1]
 gi|149819117|gb|EDM78553.1| secretion protein HlyD [Plesiocystis pacifica SIR-1]
          Length = 428

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 61/377 (16%), Positives = 125/377 (33%), Gaps = 48/377 (12%)

Query: 21  TLLSIIGIIGLITW-SILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGS 76
            L  IIG+  LI   +   P + +V+ +G ++     +    +++P  G I ++ V+ GS
Sbjct: 1   MLARIIGVALLIAIVAAFSPWQQNVAGTGRVIAYAPLERQQAVEAPIEGRIVRWHVQEGS 60

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++  G  L         D+ D     +      +D  + A        DV +    S E 
Sbjct: 61  RVRAGDSL--------ADIADNDPDILARYERQLDAAQMAKTASQGSVDVAKARITSLEL 112

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              D           V    + +  R++       R+  LNR   E              
Sbjct: 113 A-ADAKRSSAGLRVDVARDRLVAAERAVDAAKASSRTADLNRDRKEA------------- 158

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL---YDEANL 253
                   LFE+   S+ D+   +        +L       +   R I  L     EA  
Sbjct: 159 --------LFEEGLASKRDVEVAQMKAETEAADLDRAEANLRAAKREIERLGVNRTEAGA 210

Query: 254 EFANYLKEISRDLEQNQRTFA---DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                +++   DL + +   A    E+ K+      +++ TI++P  GT++         
Sbjct: 211 SATASVEKAKADLRKAEADLAKAETEVQKVETRLARQQRMTIVAPRDGTVLKIVVKQDGQ 270

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--------KK 362
             +    + + VP    + +   ++ +    +  G    ++F  +  ++           
Sbjct: 271 MVKAGDAVARFVPDMSASAVEVWMSGRDGPLIAPGRKVRLQFEGWPAVQFVGWPSAAVGT 330

Query: 363 FKAIIEKIDPIISQQDN 379
           F  ++E +D        
Sbjct: 331 FGGVVEFVDATTDDAGR 347


>gi|313115635|ref|ZP_07801092.1| hypothetical protein HMPREF9436_02979 [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310622051|gb|EFQ05549.1| hypothetical protein HMPREF9436_02979 [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 370

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 89/271 (32%), Gaps = 21/271 (7%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN---------DLNQQERIV 223
            I + + +LE++  + +  L  + K L  +++  + N  S+               +  V
Sbjct: 99  DIDMQQDNLESQLKIYQTQLDQYNKLLQCVQD--DTNYFSETNPEDQPYYYQYETYKSQV 156

Query: 224 YKSTLELRENIHE---QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            + T +             +   + +   E    + + ++ IS+ +   Q    +  ++L
Sbjct: 157 SQKTFDATAYQAAGYSDAQIKTMMEQSQSEVEALYYSTMQSISQSITSAQSNVDNVQAQL 216

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
             L        I +P +G I  +  +          PL  +   +    I A VT     
Sbjct: 217 DALNTGANDYYIYAPTSGVIHMDTPYKEGMVLSAGSPLATVASENDDLEIVAMVTVNDRP 276

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD---LA 397
            +  G    +     ++         +  ID  ++   N      YY++ +K      ++
Sbjct: 277 LLHVGDPCKIAITGLSEYSYGTLTGTVTAIDSDVTASSNA----SYYKMTIKPDATYVVS 332

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            S + ++L NG            T  +  + 
Sbjct: 333 RSGDKVDLSNGMSVTARVEYDQVTYFEYAME 363



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 67/197 (34%), Gaps = 3/197 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +++  P       +L  I ++ L+ WS          ++G +    N   I S +SG I 
Sbjct: 18  MEKKLPPYGYAFVILVGIFMLFLVVWSTHTNRIYVSQNAGTVQAS-NKTYIMSSYSGSIT 76

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  +  GS + +G  +   +  +     D  +  +K  +  +D     L  + +  +   
Sbjct: 77  EMYISEGSYVNEGDLVAHIKSTDIDMQQDNLESQLKIYQTQLDQYNKLLQCVQDDTNYFS 136

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE--NKSS 186
           +     +     +         K F+            ++  M     + ++    +   
Sbjct: 137 ETNPEDQPYYYQYETYKSQVSQKTFDATAYQAAGYSDAQIKTMMEQSQSEVEALYYSTMQ 196

Query: 187 LLRALLSSHQKDLTMMK 203
            +   ++S Q ++  ++
Sbjct: 197 SISQSITSAQSNVDNVQ 213


>gi|332995299|gb|AEF05354.1| membrane-fusion protein [Alteromonas sp. SN2]
          Length = 394

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 62/427 (14%), Positives = 139/427 (32%), Gaps = 53/427 (12%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS-GIIKKFQVE 73
           AS   +T + ++ I+G+  +          +  G +     V+ + +    G I +  V 
Sbjct: 5   ASHMGITAILLLWIVGVGIYLTTGSYARKATVEGWLEPSHGVLRLYADARKGRISQVYVS 64

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +G PLL+ E                                   Y V +   E+
Sbjct: 65  EGQKVKKGEPLLSIE-----------------------------------YGVQQPQGET 89

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            E +L   L       S      IS    +    L +++    +   + +  ++      
Sbjct: 90  VELKLQQELLAKRKRISDSLARTISIHKSNNAQLLKQLQHAQKDAETIRHILAISYQQWQ 149

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
                 T ++ L     VS  D +  +  +  S    ++   + +               
Sbjct: 150 LAHNQFTSLEVLRNAGHVSNADFDSYKLELLSS----QQQWKQAERNNLKSEAEVSRLTH 205

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E A   +  + +   ++   +D   +L  L + R++  + +   G +   Q+ S+     
Sbjct: 206 EIAGLPQIQANERTVHENQLSDINQQLLTLNRDRQR-ILYATQNGVVSSLQA-SAGLMVD 263

Query: 314 QSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           Q++PL+ ++P +    I A+  V  +    +  G    +R+  +   +    +  I  I 
Sbjct: 264 QNRPLLSLLPENSP--IEARLLVPVRAAGFIANGQQLAIRYDAFPYQKFGLQEGQIISIS 321

Query: 372 PIIS-----QQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQ 424
             I             ++  Y V  ++   A     N + L+ G            +L +
Sbjct: 322 ETILLPGEWANAPLTVSEPAYLVTARVNSDAIIAYGNPVMLKVGMTFSADVALSQRSLLE 381

Query: 425 EIIHPIT 431
            I+ P+ 
Sbjct: 382 WILEPLL 388


>gi|320160177|ref|YP_004173401.1| secretion protein HlyD family protein [Anaerolinea thermophila
           UNI-1]
 gi|319994030|dbj|BAJ62801.1| secretion protein HlyD family protein [Anaerolinea thermophila
           UNI-1]
          Length = 487

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 68/432 (15%), Positives = 142/432 (32%), Gaps = 55/432 (12%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITW------SIL---------LPIEISVSSSGEI 50
             N  +    +L  + +LSI G      W      +            P+   V ++G +
Sbjct: 18  TGNSMKRTLLTLLIIAVLSIAGYFAFTAWQNSRTIAATNWQTTTVTRGPLVAVVGATGTV 77

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
              +    +    SG I +  V  G  + +   L T ++   +  I L K  +   + ++
Sbjct: 78  RA-NQTAVLAWQTSGRIAEINVSVGDAVQKDQVLATLDEKSLSQSIILAKADLVTAKRNL 136

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +  K   D    +    +    +R+E       +     S+     I     +L +    
Sbjct: 137 ENLK---DSQLAQAQAYQALVAARKELEDAQKNRASKQYSRALPDTIEVARANLALAEEE 193

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE- 229
           ++         +++                   +L    A++  +  +++R   K+ LE 
Sbjct: 194 LKKAQDTYDIFKDRPES----------------DLLRAQALTALNEARKKRDRAKANLEY 237

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L     E +           EA L  A    E  +D   +        +++  +E T E 
Sbjct: 238 LTGGPDELEIEQADARLRLAEAKLADAEREWERVKD-GPDPDDLMAAEARVAAIEATLEL 296

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYT 347
            ++ +P  GT+   +S    +         +I          +  ++T   I  V+ G  
Sbjct: 297 VSLKAPFNGTVTEVRSM-VGDSVNPGTVSFRI---DDLSRLLVDVQITEVDINRVRVGQN 352

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           AT+ F     I  K++   + ++  +      N+Q    + V L++TD      +  +R 
Sbjct: 353 ATLTFDA---IPGKEYHGKVTQVGRV----GTNVQGVVNFTVTLELTDA-----DEAVRP 400

Query: 408 GFPAEVLFTAKN 419
           G  A V      
Sbjct: 401 GMTAAVNIETDR 412


>gi|225849048|ref|YP_002729212.1| multidrug-efflux transporter MFS family [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225643487|gb|ACN98537.1| multidrug-efflux transporter, MFS family [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 378

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 58/364 (15%), Positives = 129/364 (35%), Gaps = 57/364 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +   +   ++  G  +   +D +    I+  +  I+ L       +S L  +  +
Sbjct: 56  SGRVVQLYKKESDEVKAGEVIAKIDDTDYKLQIEALEKEIEALTYQKKQLESQLQRVARE 115

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D+ E       E++   L                                      L+ 
Sbjct: 116 TDINESISALTVEEISKKL------------------------------------ESLKA 139

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE---RIVYKSTLELRENIHEQKNM 240
           +   + + +   +KD    +NL EK  V++    +      ++ K  L + +NI E K  
Sbjct: 140 QKDQIESQIKLAKKDEERYRNLLEKGLVAKRKYEEVHTNLEVLEKQKLAIEKNISELKVS 199

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           +    +  + A  +  +  +E+   +          + K   LE   +   + +P  G +
Sbjct: 200 MEKSKKSVEYAKTQ-KSITEELQNQINAISSQIESLLKKKQDLENQLQYTELKAPFNG-V 257

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V  +  S  +  +  QP+  I+  S   Y++  +   +++ VK G  A ++   Y D   
Sbjct: 258 VAKKFVSIGDVVKAGQPVYAIL-KSDSFYVKVLLEETKLEGVKVGNKAYIKLDAYPD--- 313

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           K F+ ++E ID   + +        +  V   I+   F+     +    P ++  T  + 
Sbjct: 314 KTFEGVVESIDVASAAK--------FALVPRDISAGEFTKLAQRI----PVKIRITKGDI 361

Query: 421 TLAQ 424
           +L +
Sbjct: 362 SLLR 365


>gi|221215551|ref|ZP_03588514.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia multivorans CGD1]
 gi|221164539|gb|EED97022.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia multivorans CGD1]
          Length = 422

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 64/426 (15%), Positives = 144/426 (33%), Gaps = 50/426 (11%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P S    T ++I   +G+I   +        + +G ++    +V+I +P  GI+    V 
Sbjct: 31  PVSFATATAVAICIALGVILLFVFGSYTRRTTVAGVVVPNTGLVKIYAPQPGIVLVRHVT 90

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +G P+           +  +  S  N + H     SA          ++K    
Sbjct: 91  EGQHVEKGHPMFV---------VSRELHSAANGQTHAALIASAHQRKIALQHEIDKVRIL 141

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
              +L     +  +  +++    +    +  +  L    ++  +RL   +  S   A   
Sbjct: 142 HRSELDRLHARIANLRAELGRIDVQLASQERRTHLAVDATLRYDRLLANDFISKDEAQQR 201

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
                     +LF++    Q+ L   +R    S L L + I+E   +         +   
Sbjct: 202 HA--------DLFDQ----QSRLQGLKRERAASALALNDAINELSGLGPKHQNQVSQMRR 249

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              +  + +     + QR F                  + +P +GT+    +      A 
Sbjct: 250 SVIDVDQTVIE--SEAQREF-----------------IVTAPESGTVAAVLT-EPGQTAD 289

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--D 371
            S+PL  IVP          V  + I  ++   +  +R+  Y   +  ++ A +  I   
Sbjct: 290 GSRPLASIVPDGAHWQAHLFVPSEAIGFIRTDDSVLIRYQAYPYQKFGQYAAKVVSIARS 349

Query: 372 PIISQQDNNLQTQE-----YYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQ 424
            + + + +N          +Y V + + +   +    + +L+ G         +   L +
Sbjct: 350 ALSAAELSNSGAPPEIMGSFYRVTVALKEQDVTAYGASQKLQAGMSLHADVFRERRRLYE 409

Query: 425 EIIHPI 430
            ++ P+
Sbjct: 410 WVLEPL 415


>gi|229141782|ref|ZP_04270311.1| hypothetical protein bcere0013_48710 [Bacillus cereus BDRD-ST26]
 gi|228641707|gb|EEK98009.1| hypothetical protein bcere0013_48710 [Bacillus cereus BDRD-ST26]
          Length = 327

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/331 (13%), Positives = 122/331 (36%), Gaps = 21/331 (6%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+R  P  +  +    +I + G I W+    ++I       I  +  +   ++  +G ++
Sbjct: 4   LERKPPRFIAGLLGFLLIALFGFIIWAYFGKLDIVSKGIATIQGKSAISVSRAQMTGNVE 63

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V+ G ++ +G  L+  ++ E  D    K+     +  H++ +K  L+ L       +
Sbjct: 64  DVAVKIGDEVKKGDTLIQLKNSELVD----KENQANQIVQHLEKQKEMLEQLKQSVQSHK 119

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL------TRMRSIYLNRLDLE 182
            AF +  +  +    K +    +       +    +          + ++ +   + ++E
Sbjct: 120 PAFSNEVDTKIKEEFKAYEQAYRTLQNEKENEIELISNSKISDEHDSTLQGLIAEKENIE 179

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                ++      +  L   + L +  A S     + ++I  +  ++ R+ I E      
Sbjct: 180 RDIQSIKKQRK-REDSLKEQQQLLDDKADS----LKFQQISVEKQIQQRKEILESDRKKI 234

Query: 243 HI------NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            I       E  D  N    N +  +++ ++  ++    +  ++T L +  +  TI +  
Sbjct: 235 DITKVGKQKEKKDALNQYRENTVISVNQRIQSLEQEIFMKKQEVTSLLQQNQTTTIKAQK 294

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
            G + +       +     Q ++ I+P  + 
Sbjct: 295 DGIVQFPSIIQKGDLIDPGQEIVFIIPKEEE 325


>gi|218886201|ref|YP_002435522.1| secretion protein HlyD [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218757155|gb|ACL08054.1| secretion protein HlyD family protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 443

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 58/417 (13%), Positives = 128/417 (30%), Gaps = 61/417 (14%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + + +L  + ++    W     +    +   ++  +  +  +    +G +    VE+   
Sbjct: 13  RILGILLGVMVLAAGIW-YWHGLGKVETDDAQV--DGRIFMVSPRVAGYVVDVPVEDNQF 69

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +  E    +   +  +  L+  +  E S           +E+A + R  Q
Sbjct: 70  VKEGEVLARLDPTEYEVAVAEARAQLAALQRGVPLELSQTVHRVTGAQAVEEATKRRAAQ 129

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D                                   + RL  E   + L         
Sbjct: 130 ARDEEDAAR---------------------------YEMERLSTEQAQAAL--------- 153

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D   +++L  + AVS+   ++       +   L  +  + +   +       E     A 
Sbjct: 154 DRRRLESLVGQGAVSREAADRARSTDDAAKARLESSRAKLEAASKARAAAEAEMRRVRAE 213

Query: 258 Y----LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                  ++  ++   Q     + +K+   E   E  T+ +P+ G +             
Sbjct: 214 VDLAGTGQVVAEIRARQVEA--QQAKVRQAELNLEWTTVRAPVDGYVTKKNV-EPGRMVT 270

Query: 314 QSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           + QP+M +VP S    ++ A     ++  VK G    +R   Y ++     K ++E I  
Sbjct: 271 RGQPIMAVVPMSPDHLWVTANFKETELTDVKPGQPCEIRVDTYPNL---VLKGLVESIMA 327

Query: 373 IISQQDNNLQTQ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 +    Q          +   V L++TD   +     LR G     +     
Sbjct: 328 GTGAAFSLFPPQNASGNFVKVVQRIPVRLRLTDYDPATMP-PLRVGMSVVPVIFTGR 383


>gi|159026158|emb|CAO88808.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 485

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/346 (12%), Positives = 106/346 (30%), Gaps = 45/346 (13%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G ++     V +    +G I+   V++G Q+ QG  +   +  +    ++     + + +
Sbjct: 58  GTLI-AQQRVSVSPQITGRIRSIFVKSGDQVTQGQKIAELDPEQQQQQVNASIGQVNSAK 116

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            +++  ++ L                          +     ++     I+    ++   
Sbjct: 117 ANLNASEADL--------------------------RQRQAQARANKAQIAQNRANVANA 150

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              ++S        E      RA L   +K+LT  + L ++ A  Q DL+ + R +  + 
Sbjct: 151 EANVKSQIATLSAAEADLQRARANLDLAEKNLTRAEFLVKQGAQPQQDLDDRRRDIQAAK 210

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE-------------QNQRTFA 274
            E+      +    + +                 I  +L                Q   A
Sbjct: 211 AEVEARSQNRDAARQQVTAARATLQANKEALNIAIQNELASGQQVAAAAATVNSRQAAVA 270

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
               +L    +     TI +PI G +         +     + L  +  ++K   +  ++
Sbjct: 271 SAEGQLGATRQNLVFNTITAPIDGFVGDFNQRKVGDIISLGEELTSLT-NNKTLELNVQI 329

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             +    ++ G    +             +  +  I P +SQ   +
Sbjct: 330 PVELQPRLRVGLPVEI----INPDGSPGVRGQVTFISPTVSQATQS 371


>gi|226310987|ref|YP_002770881.1| hypothetical protein BBR47_14000 [Brevibacillus brevis NBRC 100599]
 gi|226093935|dbj|BAH42377.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 409

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 67/380 (17%), Positives = 127/380 (33%), Gaps = 90/380 (23%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
              V ++G++   + +  + S  SG      V+ G+ + QG  L+T E  +    I+  +
Sbjct: 49  STGVIANGKVAASEEIQVV-SKVSGKAASVNVKEGAVVKQGDVLVTLEAADYQQQINQAQ 107

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            +I   +  +   K+                 +R EQL                      
Sbjct: 108 AAIAGAQAKLRDTKAG----------------ARNEQL---------------------- 129

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                               L +  +   A L   + +   MK LF+  A+SQ       
Sbjct: 130 ------------------TQLGSIVTQAEASLKVVESNYNRMKALFDAGALSQ------- 164

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                   EL ++  E +     + +   + +L  A    +    +   Q   +   S L
Sbjct: 165 -------AELEKSSLELEKARTGLEQAQAQYDLAKAGPTADTVAAM---QAEVSRLGSSL 214

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            + +   +   I +PI G +   ++      A    PLM +V  +    + A V   +I 
Sbjct: 215 ELAKSNYDNTIIRAPITGIVAK-RAVDPGEMAAAGTPLMVLVNMAD-VKVEASVPENEIN 272

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            VK G T  V+         K  K  +E + PI     ++      + + +K+     ++
Sbjct: 273 QVKVGSTVDVKVGSLG---GKVLKGTVEFVSPISDTNSSS------FPIKVKV-----NN 318

Query: 401 NNIELRNGFPAEVLFTAKNT 420
            +  LR G  AEV+   + T
Sbjct: 319 QDGMLRAGMVAEVMLQGQAT 338


>gi|229113571|ref|ZP_04243019.1| hypothetical protein bcere0018_57410 [Bacillus cereus Rock1-15]
 gi|228669870|gb|EEL25265.1| hypothetical protein bcere0018_57410 [Bacillus cereus Rock1-15]
          Length = 414

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 62/425 (14%), Positives = 150/425 (35%), Gaps = 48/425 (11%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W+    I+IS   S  I +    V +K   SG I   +++ G ++ +G PL+      T 
Sbjct: 2   WAYFSKIDISTKGSATIQSSTATVAVKPKVSGEINDIKIKQGEKVHRGDPLIGI----TN 57

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             ++ +K  ++  R  +D E  +L+ L +  +  +       E  +      +     + 
Sbjct: 58  KQLEQEKKHVEENRDKLDAEIKSLNILKDVIEKNQSKLPVDVEGSIKNELDSYLKQKDLL 117

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                +       +L  +       + +LE +   ++      + +      L ++N + 
Sbjct: 118 KNENKNKIADFTFRLQVLNHGKDEVINNLEFEIEAIKNQNDILKIEKEG---LLKQNKII 174

Query: 213 QNDLNQQERI-----VYKSTLELRENIHEQKNMLRHINELYDEANLE------------- 254
           +N+   QE       V +   ++  N+         I     E  LE             
Sbjct: 175 KNENINQETEANMNKVNQLDSQIEGNLKSILIKQEQIKNRTQEIALEKKVINENIRTQES 234

Query: 255 ---------FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                      + + +IS+++++ ++  +     +  +  + EQ  I +P  G I     
Sbjct: 235 NIQDSVESLRISKVSDISKEIDEKKKQLSLLQQDINNINLSYEQTVITAPKDGVIEMPNL 294

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
               +  +Q + ++ I P      +   +  ++I  +K G    +++  +     + +  
Sbjct: 295 IKIGDMIEQDKEVLSISPDENTNRVLLYINSEEINKIKTGDK--IKYT-FEVGTTETYYG 351

Query: 366 IIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            + +I  DP+IS+  +      ++ V   I +        +LR+G   +         + 
Sbjct: 352 SVVQIYHDPVISKNKDTT----FFVVEGTIENTGKK----KLRSGSTGKAAIVVNQKNIL 403

Query: 424 QEIIH 428
             I+ 
Sbjct: 404 SLILE 408


>gi|239905470|ref|YP_002952209.1| efflux system protein [Desulfovibrio magneticus RS-1]
 gi|239795334|dbj|BAH74323.1| efflux system protein [Desulfovibrio magneticus RS-1]
          Length = 404

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/393 (13%), Positives = 125/393 (31%), Gaps = 51/393 (12%)

Query: 46  SSGEIL-----NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           + G++       +  +  I    +G + +  VE+   +  G  L   +  +    +   +
Sbjct: 41  ARGKVSTDDAFVDGRIHPITPRVAGYVDEAPVEDNQLVAAGDVLAVLDPTDYEVALAQAR 100

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +      +  ++  +    ++                                 ++  
Sbjct: 101 ADLAAAESQLAAQELGVPLQRSQTS-----------------------------SKVTGA 131

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              L+ +   +      R     +++ + A L   + D   +  L  K+AVSQ+DL+  E
Sbjct: 132 RAQLESEQRSLDQAVKERDAAVQEAAQIEAQLDQDKLDHARISQLRTKDAVSQSDLDSIE 191

Query: 221 RIVYKSTLELRENIHEQKNMLRHINEL-----YDEANLEFANYLKEIS----RDLEQNQR 271
                   +LR    +     R +  +        + +E A   +E +    R+    + 
Sbjct: 192 NKRRAHEAQLRAAKAKADGAGRRLESIEAVIKRLRSEIELAQTGEEQAVIQTREAAAQRA 251

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-LTYI 330
                  K+   E       I +P+AG +   Q   S       Q LM +VP      ++
Sbjct: 252 KVELARQKVKQAELNLSYTRITAPVAGHVTKKQI-ESGRLVAAGQALMTVVPLDSKELWV 310

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYA-DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
            A     Q++ V+ G +  +    +         ++I      + S   +   +  Y ++
Sbjct: 311 TANFKETQLRDVRPGQSVDIEVDTFPGHAITGTVESIQAGTGSVFSLFPSENASGNYVKI 370

Query: 390 ILKIT-----DLAFSDNNIELRNGFPAEVLFTA 417
           + +I      D + +D   +LR G     +   
Sbjct: 371 VQRIPVKIVFDKSAADKLPQLRLGMSVVPVIHT 403


>gi|327190517|gb|EGE57612.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CNPAF512]
          Length = 335

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 56/382 (14%), Positives = 112/382 (29%), Gaps = 69/382 (18%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G I        + +P SG I +        + +G  ++ F+D    + +      I    
Sbjct: 5   GTIRPIVEKTPLIAPVSGRISRVLAFENDVVAKGKEIIAFDDHVIEEKLSGVLADIHA-- 62

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                                                  S  +  F   ISS  R     
Sbjct: 63  --------------------------------------KSDLAHDFQTLISSGARLSVSP 84

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             +  S    R+   N     +   S+   +L   K L    A     ++  E+      
Sbjct: 85  PLQTESATAERVHFLNLLRENQNARSNAAAELDRAKRLVSAAAAPAKTVD--EKAFALQN 142

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           +E++  I  ++                      + ++ L        +  + L  LE  R
Sbjct: 143 IEVQGEILVRRKT-------------------ADWNQKLLDANLRLKELTATLHQLEHER 183

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           +   I +P++G +      +  +Y Q  Q +  I P+         V+P  I  V+ G  
Sbjct: 184 DLHRIRAPVSGALEQFSGLAHGSYVQSGQTVGWISPNDD-LVAEIYVSPNDIGFVQPGQP 242

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IE 404
             ++   +   +    KA + ++    +Q          ++V   ++    +  +     
Sbjct: 243 VRLQVDAFNYNQWGVIKARVVEV----AQDFTLHDGNPVFKVQCALSRSELALKSGAIGH 298

Query: 405 LRNGFPAEVLFTAKNTTLAQEI 426
           L+ G      F   N TL Q +
Sbjct: 299 LKKGMTVRARFLLANRTLLQLL 320


>gi|300866720|ref|ZP_07111404.1| Secretion protein HlyD family protein [Oscillatoria sp. PCC 6506]
 gi|300335320|emb|CBN56564.1| Secretion protein HlyD family protein [Oscillatoria sp. PCC 6506]
          Length = 552

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/451 (11%), Positives = 127/451 (28%), Gaps = 94/451 (20%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
               ++ +I +  +G +    V +  Q+  G  L+  +  +    + L + ++++ R   
Sbjct: 103 TVSGHIHQISTRINGTVSDVLVADNQQVKPGQLLVKLDPRDYQVKVQLAQAALESARRQA 162

Query: 111 DTEKSALDFLNN-----------KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG--- 156
              +S++   +                 + A  + +  L +      +  + V       
Sbjct: 163 QAAESSVSLASQTNQGKTTQAQGDISTAQAAIGTAQAALREAQAGVPAAQAIVAQEEAGV 222

Query: 157 ------ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 ++    S+     R+R         + + +   A ++  + DL     LF++ A
Sbjct: 223 PAAQAKVTQAESSIPQAQARVREAQAGVSGAQARLAQAEATVTKAKADLQRYDELFKEGA 282

Query: 211 VSQNDLNQQERIVYKSTLE--------------------------------------LRE 232
           ++   L+   +    +  +                                       + 
Sbjct: 283 IAGQQLDTARQAYDVAVAQKTAAQQGIEQAKAQVAQAQQGVATAQAALAEAKEGVNQAQA 342

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEI--------------------SRDLEQNQRT 272
            + + +  +        +A     +   ++                              
Sbjct: 343 KVAQARVGIASAEAKVAQAQEGITSAQSKLEASRGGLQQAQATGQQTQVNRSQYNAALGA 402

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A   + L   +       I +P AG I   +S       Q   PLM IV  S   ++ A
Sbjct: 403 IAQSEATLKDAQLQLSYTNITAPAAGVI-GRKSVEVGQRVQPGTPLMAIV--SNEYWVTA 459

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE 388
                Q+ ++K G    ++   + + +   F+  ++   P    Q      +  T  + +
Sbjct: 460 NFKETQLTNMKPGQKVEIKLDAFPNHK---FEGRVDSFSPASGSQFALLPPDNATGNFTK 516

Query: 389 ------VILKITDLAFSDNNIELRNGFPAEV 413
                 V +     +       +  G  A V
Sbjct: 517 IVQRIPVKVVFDGESVKGYESRIAPGMSAVV 547


>gi|85858810|ref|YP_461011.1| periplasmic component of efflux system [Syntrophus aciditrophicus
           SB]
 gi|85721901|gb|ABC76844.1| periplasmic component of efflux system [Syntrophus aciditrophicus
           SB]
          Length = 336

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 56/372 (15%), Positives = 117/372 (31%), Gaps = 73/372 (19%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG I    + +  +    G +    V  G  I  G  L   +  E T   +  + ++   
Sbjct: 36  SGTIEATQSQLSFQ--TGGRVAVVHVREGDSIKAGQRLAELDTDEWTARYEQARAALDR- 92

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                                     +RE ++L                 ++   +SL  
Sbjct: 93  ----------------------AGKNTREMEIL-----------------LNFYQKSLPA 113

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           ++TR R+   +R ++          L+  +++ T    LFE+  V++ + +  +     +
Sbjct: 114 EVTRARANVESRTNI----------LTEARRNNTRYTQLFERGVVTEKERDAVKLHYDNA 163

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L E     +     +N++                 +LE  +       S L  +   
Sbjct: 164 IASLTEGKAAFRQAESGLNKIEA------------TRMELEAARAQTEAARSALKEVSIQ 211

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP--KQIQHVKK 344
               T+ +P  G I               + +  +   S L  +  K+     +I  V+ 
Sbjct: 212 LAYTTLSAPSDGIITSRNV-EPGEVVTPGREVFTL---SNLATVDLKIFVGETEIGKVRP 267

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G    V+   +       FK  +  I P        +QT +    ++ +  +A  + +I 
Sbjct: 268 GQPVDVKVDTFPGRI---FKGRVSYISPEGEFTPKIIQTFKERVKLVYLVKVAVPNPDIA 324

Query: 405 LRNGFPAEVLFT 416
           L+ G PA+    
Sbjct: 325 LKPGMPADAWLR 336


>gi|220910034|ref|YP_002485345.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7425]
 gi|219866645|gb|ACL46984.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7425]
          Length = 425

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 55/374 (14%), Positives = 116/374 (31%), Gaps = 43/374 (11%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V  G  + +G  ++  +D E    +      I   R  ++  +  +  +    
Sbjct: 78  GRIDFVAVREGDAVKRGQVVVRLDDDEIQAQLQGATAQIAAARQQVEQARWQIGVV---- 133

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                     E Q+ +       T  +            +      + +        + +
Sbjct: 134 ----------ESQIAEAQLNLEQTRGQA--------QGQIYQAEANLAAAQAQLNQAQAQ 175

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  RA L+  +KD      L+++  V+Q  L+Q +     +   L+      K   R +
Sbjct: 176 LNQARAELNLARKDRDRFAQLYQEGVVTQQRLDQAQTTYDTALASLQSRQAGVKTAERQV 235

Query: 245 NELYDEANLEFAN---------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK----- 290
           N           +          ++ +   L   Q        ++ + E  R+Q      
Sbjct: 236 NAAQGALTAIQTSSLNPTISQARIRALQNQLTAAQAQLRQAQQQVKVAEANRQQIQAQIA 295

Query: 291 --TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              ++SPI G +V  +S          + L+ ++ +    Y+R  +    I  V+ G  A
Sbjct: 296 YLNVVSPING-VVTARSVEPGAVVTGGKTLLTVI-NPDTVYLRGFIPEGDIGKVRVGQRA 353

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            V      D      +A +  ID   S    N+  ++     +    +         + G
Sbjct: 354 EVFLDSAPDQ---PLRARVTAIDTQASFTPENIYFRQDRVRQVFGVKIGIEQPGGWAKPG 410

Query: 409 FPAEVLFTAKNTTL 422
            PA+       T+ 
Sbjct: 411 MPADAQILMNPTSA 424


>gi|238789002|ref|ZP_04632792.1| Auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia frederiksenii ATCC 33641]
 gi|238723029|gb|EEQ14679.1| Auxiliary transport protein, membrane fusion protein (MFP) family
           [Yersinia frederiksenii ATCC 33641]
          Length = 425

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 56/405 (13%), Positives = 129/405 (31%), Gaps = 63/405 (15%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  GEI      + I S   G I K  V  G ++++G  +   +  + T    + + + 
Sbjct: 53  VNVHGEITTIPRPINIFSSQQGFITKSLVNVGDEVIKGQAIYHIDISKVTCSGIVSQNNQ 112

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           + ++  +   +S +  L +   V                              +S++   
Sbjct: 113 QAIKQQLVQVQSIIRNLQSNKHV-----------------------------TLSNMSVQ 143

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                   +       D +     +R  ++S+ + L        K  +++  +N Q    
Sbjct: 144 KNKYEAVYQQSAQLVKDSQRNVESMRKTVNSYGEYL-------RKGFITKEQVNNQTYAY 196

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKL 280
           Y+  +      ++       I  L  E     A++  +IS+        QR  ++     
Sbjct: 197 YQQQIASHSLYNQNMQETLQIINLESEMVTRAADFDNQISQYELQYGNLQRQLSE----- 251

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA-KVTPKQI 339
                      I +P+ G I      ++         L +++P S   Y     +    I
Sbjct: 252 ---TDATGILVINAPVDGRIESLSV-TTGQMVNVGDSLAQLIPGSDALYYLVLWLPNGAI 307

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI------------ISQQDNNLQTQEYY 387
            ++  G    VR+  +   +  +F   IE +  +               + +    + YY
Sbjct: 308 PYISAGDRVNVRYDAFPFEKFGQFSGRIETLSTVPASIQEMSSYNSTPPRHSGGGAESYY 367

Query: 388 EVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           ++++ +        +  + L  G  A+     +  +L Q +  P 
Sbjct: 368 KILVVLDKTQLLYQEKILRLTGGMKAQSTLFLEKRSLYQWMFSPF 412


>gi|300772711|ref|ZP_07082581.1| multidrug resistance efflux pump [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300761014|gb|EFK57840.1| multidrug resistance efflux pump [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 364

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 53/377 (14%), Positives = 120/377 (31%), Gaps = 70/377 (18%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + N+  I     G + K  V++   + +G  L T E  +    +   + ++      ++
Sbjct: 48  VDKNMSPIIPRVGGYVSKVFVKDNDIVKKGDTLFTIEPQDYLVKVQEAQAALLAAESSLE 107

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             K+ +   +    + + + +S    +     K  +  +       S++Y +  +   + 
Sbjct: 108 VSKADVFASSANVAISDASIKSNVGSVDA--AKIRAEQANNDYVRYSNLYNNHSITKQQY 165

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                 +L+ E +                              ++ QQ+R    S    +
Sbjct: 166 EQALTAKLEAEKQ-----------------------------VEILQQQRNASAS----Q 192

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            N    K  +        +AN+E A  +                    L     +    T
Sbjct: 193 RNAVVSKTTVASKQTSVAQANIERAKAV--------------------LDAANLSLSYTT 232

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           +++ + G +   +           Q L  IV +S+   + A     Q+  ++ G   T++
Sbjct: 233 VVASVDGQVSNIKI-QPGQMINPGQSLFYIVDNSETWVV-ANFKETQLNKMRPGQKVTIK 290

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDN 401
              + D    +F+  I    P    +      +  T  + +      V +++TD   +D 
Sbjct: 291 IDAFPDT---EFEGEINSFSPATGSRFSLLPPDNATGNFVKTVQRLPVKIRLTDKNTTDK 347

Query: 402 NIELRNGFPAEVLFTAK 418
              LR G  A+V    K
Sbjct: 348 IALLRPGMNADVDVHVK 364


>gi|254430245|ref|ZP_05043948.1| secretion protein HlyD [Cyanobium sp. PCC 7001]
 gi|197624698|gb|EDY37257.1| secretion protein HlyD [Cyanobium sp. PCC 7001]
          Length = 362

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 55/421 (13%), Positives = 120/421 (28%), Gaps = 96/421 (22%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           + G+  +  W    P  + V +SG +        + +P  G + + +++    + QG  +
Sbjct: 13  LSGVALMAIW----PYRVVVRASGSVRPGGETSLVHAPRDGRVGEIRIQPNQVVEQGQVI 68

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
                     ++D   +  + LR                                     
Sbjct: 69  ---------AVLDPADLEGQQLR------------------------------------- 82

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                        +++   L  +L   R++       + +    RA L+    +      
Sbjct: 83  --------LQQDQAALESQLTAQLQEDRAVLAA---AKLEVDKARATLALATSESQRYSQ 131

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E  A S+  + ++   +  +   L +++ E +               + A    E ++
Sbjct: 132 LMESGAASREQMEEKAASLSVARSNLAKSLREVEQQRHRGESAEARLAQQLAQNRAEQAQ 191

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                             L +   +  + +P+ G +      +        Q L +I P 
Sbjct: 192 ------------------LARDLGRTLVRAPVGGVVFTVALRNPLQVVVAGQELARIAPK 233

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII---------- 374
                ++  V+ + I +VK G  A +R            +A +  + P            
Sbjct: 234 GSELLVKVLVSSEDIANVKAGQRADLRLAGCPFPDFGTLRAEVLSVAPDAFVSAGVADPG 293

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEII 427
                S   N       YEV L+         +    LR G       T +  T+ Q ++
Sbjct: 294 GMPAPSGSGNVGVGASGYEVTLRPESRELRSRSRSCALRLGMDLTADITTRVETVHQFLL 353

Query: 428 H 428
            
Sbjct: 354 R 354


>gi|295697684|ref|YP_003590922.1| efflux transporter, RND family, MFP subunit [Bacillus tusciae DSM
           2912]
 gi|295413286|gb|ADG07778.1| efflux transporter, RND family, MFP subunit [Bacillus tusciae DSM
           2912]
          Length = 426

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 54/378 (14%), Positives = 116/378 (30%), Gaps = 76/378 (20%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
              + +G++   D+V  + S     +    V  GS++ +G  L+  +  + T  ++  + 
Sbjct: 49  GGQTVTGKVAAADSVQ-VSSKLGARVTAVHVSEGSRVHKGQVLVELDPTDYTAAVNQAQA 107

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            ++          +       +  + +    +RE+Q+           +           
Sbjct: 108 GLQQ---------AQAGLAAAQAKLADTLAGAREQQIQQLQAAVEQAQA----------- 147

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                                           + Q +LT  +NLF   A  Q+ L+Q + 
Sbjct: 148 -----------------------------AYDTAQDNLTRTQNLFNAGAAPQSALDQAQL 178

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            + ++   L +   +                   AN +  +   ++Q +       + L 
Sbjct: 179 GLAQAKGALDQAKAQLSLAQAGAT----------ANTIAALRAQVDQARGAVNQAQAALQ 228

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
             +       I +P+ G +           A    PLM +V +     + A V    +  
Sbjct: 229 AAQNNLANTKITAPMDGVVASKNIN-PGEMAAPGVPLMTLV-NLDTVKVDASVPQTLLPG 286

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           +  G T  V      D     F   I  + P+  Q +N       + V + +      ++
Sbjct: 287 LHTGQTVAVHVAELGDQI---FTGTITFLSPVSDQNNNT------FPVEVTVP-----NS 332

Query: 402 NIELRNGFPAEVLFTAKN 419
             +LR G  A+V F    
Sbjct: 333 GGQLRAGMVADVTFAGGE 350


>gi|78183802|ref|YP_376236.1| leukotoxin secretion protein [Synechococcus sp. CC9902]
 gi|78168096|gb|ABB25193.1| possible similar to leukotoxin secretion protein [Synechococcus sp.
           CC9902]
          Length = 396

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 54/332 (16%), Positives = 102/332 (30%), Gaps = 22/332 (6%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           L     +  V+ K      + + D          ++      SV     +      +   
Sbjct: 53  LALARTEEIVVAKGQLEPIDSVQDIQMPVGGVVEEILVKEGDSVKAGQVLIKLDTEASEQ 112

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKN-------LFEKNAVSQNDLNQQERIVYKSTLE 229
            R  LE    L R  L+  Q +    +        + E N   Q ++  +   +  +   
Sbjct: 113 QRKSLETSMILKREQLNLKQIERQRYEQVNNAEVRMLENNLALQTEILSRYMQLKAAGAF 172

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               +  QKN +        +   +    L  + + + Q     AD  S+L     T   
Sbjct: 173 SEVQLLTQKNTVEGTRGRLMQTRADRLRQLALLDQQMAQLNSEVADISSRLAEARVTLRY 232

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK--KG-- 345
           + + SP+ G +   Q  S+   AQ ++ +MK+VP         +V   +I  VK   G  
Sbjct: 233 QQLKSPLDGVVFDLQPTSAGYTAQSTETVMKVVPFGS-LEASVEVPSNKIGFVKVPVGCP 291

Query: 346 ------YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-YYEVILKITDLAF 398
                   A +    Y           + +I       +   Q QE  Y V +K+     
Sbjct: 292 KQLANCMNADISIDSYPATDFGILPGKVTRIGSDALAPNPQEQRQELSYPVTVKLIQQQL 351

Query: 399 ---SDNNIELRNGFPAEVLFTAKNTTLAQEII 427
                  + L+ G         +  +  Q ++
Sbjct: 352 QMKRGAKLPLQVGMSLTANIKLRKVSYLQLLL 383



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 81/218 (37%), Gaps = 3/218 (1%)

Query: 15  ASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
               R    ++IG       W  L   E  V + G++   D+V +I+ P  G++++  V+
Sbjct: 32  RFWMRTVTWTLIGTTVFGVGWLALARTEEIVVAKGQLEPIDSVQDIQMPVGGVVEEILVK 91

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L+  +   +       + S+   R  ++ ++          +   +  E+
Sbjct: 92  EGDSVKAGQVLIKLDTEASEQQRKSLETSMILKREQLNLKQIERQRYEQVNNAEVRMLEN 151

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                 + L +Y    +      +  + +   ++ TR R +   R D   + +LL   ++
Sbjct: 152 NLALQTEILSRYMQLKAAGAFSEVQLLTQKNTVEGTRGR-LMQTRADRLRQLALLDQQMA 210

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
               ++  + +   +  V+     Q +  +     +L+
Sbjct: 211 QLNSEVADISSRLAEARVTL-RYQQLKSPLDGVVFDLQ 247


>gi|307153215|ref|YP_003888599.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 7822]
 gi|306983443|gb|ADN15324.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           7822]
          Length = 518

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 100/316 (31%), Gaps = 40/316 (12%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V  G ++  G  ++  +  +    +   K  ++N +  +   ++         
Sbjct: 119 GRITQILVREGDRVEVGQVIVRLDSDDLQAQVAQAKAKLENAKAKLGMLEAG-------- 170

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   SR E + +     +   +++ +    +   ++                 E +
Sbjct: 171 --------SRIEDIAEARANLNQALARLADAKKGARPEAIAQA--------------EAQ 208

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               ++     Q  +   K L E+ AVS ++     +    +T  +RE         +  
Sbjct: 209 LDAAQSEAELAQNRVKRYKQLEEEGAVSIDEYQGYLQQAKSATAAVREAERRLAEAQKSR 268

Query: 245 NELYDEANLEFANYLKEISR--------DLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
               DE   +     + + R        ++ Q +   +D  + L   +   ++  + +P 
Sbjct: 269 QSDIDEQEAQVEQARQNLRRLENGPRSEEIAQARADVSDAAANLQNAQVALQKTNVTAPF 328

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           AG I         +Y ++   L  I   + +  +  ++  +  Q ++ G    +      
Sbjct: 329 AGVIGDIPI-KLGDYVKEGDQLTTIT-ENNVLEVNLQIPLQDAQKLRLGLPVEILNSQGQ 386

Query: 357 DIREKKFKAIIEKIDP 372
            I   K   I   +  
Sbjct: 387 IITTGKISFIAPNVSA 402


>gi|160945496|ref|ZP_02092722.1| hypothetical protein FAEPRAM212_03025 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443227|gb|EDP20232.1| hypothetical protein FAEPRAM212_03025 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105353|emb|CBL02897.1| Multidrug resistance efflux pump [Faecalibacterium prausnitzii
           SL3/3]
          Length = 370

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 84/274 (30%), Gaps = 24/274 (8%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            L   DL+ +   L++ L  +QK L     L +      N  ++          + +   
Sbjct: 94  RLKSTDLDMQKDNLQSQLDIYQKQLDQYNKLLKCIQDDTNYFDETNAEDQPYYYQYQTYK 153

Query: 235 HEQKNML-------------RHINELYDEANLEFAN----YLKEISRDLEQNQRTFADEM 277
            +                    I  L ++   E  +     ++ IS+ +   Q    +  
Sbjct: 154 SQVAQKTFDATTYQAAGYSDTQIKALMEQNQSELESLYYSTMQSISQSITSAQVNVDNLQ 213

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++L  L        I +P +G I  +  +           L  +   +    I A VT  
Sbjct: 214 AQLDSLNTGANDYFIYAPTSGVIHMDSPYKEGMVLSAGSALATVASENDDLEIMAMVTVN 273

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD-- 395
               +  G    +     ++         +  ID  ++  +N      YY++ +K     
Sbjct: 274 DRPLLHVGDPCKIAITGLSEYSYGTLTGTVTSIDSDVTSSNNG----SYYKMTIKPDATY 329

Query: 396 -LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            ++ S + ++L NG            T  +  + 
Sbjct: 330 VVSRSGDKVDLSNGMSVTARVEYDQVTYFEYAME 363



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 72/204 (35%), Gaps = 7/204 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + +  P       +L+ + +I L+ WS          +SG ++   N   I S +SG I 
Sbjct: 18  MDKKLPPYGYAFVILTGLFMIFLVIWSTQTNRIYVSQNSG-VVQAANKTYIMSSYSGSIT 76

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  GS + +G  +   +  +     D  +  +   +  +D     L  + +  +  +
Sbjct: 77  ELYVSEGSYVNEGDLIARLKSTDLDMQKDNLQSQLDIYQKQLDQYNKLLKCIQDDTNYFD 136

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE----NK 184
           +     +     +         K F+            ++  +  +  N+ +LE    + 
Sbjct: 137 ETNAEDQPYYYQYQTYKSQVAQKTFDATTYQAAGYSDTQIKAL--MEQNQSELESLYYST 194

Query: 185 SSLLRALLSSHQKDLTMMKNLFEK 208
              +   ++S Q ++  ++   + 
Sbjct: 195 MQSISQSITSAQVNVDNLQAQLDS 218


>gi|158333837|ref|YP_001515009.1| RND family efflux transporter MFP subunit [Acaryochloris marina
           MBIC11017]
 gi|158304078|gb|ABW25695.1| efflux transporter, RND family, MFP subunit, putative
           [Acaryochloris marina MBIC11017]
          Length = 484

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/372 (12%), Positives = 118/372 (31%), Gaps = 43/372 (11%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           +SG I    +V  +    +G++ K  VE G ++ +G  +   +  +    +     S+  
Sbjct: 64  ASGTITPAKSV-NLSPKQAGVLAKLLVEQGDEVEKGQVIARMDTRDLEGQLIQANASVAQ 122

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +  +   ++                 +R E++     +     +++      +   ++ 
Sbjct: 123 AKARLSELQAG----------------NRPEEIQQARARLVRAEAQLAQIAGGNQLETIT 166

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
              +++ S          + +    L  +  +          +   ++ +L + ++ +  
Sbjct: 167 QVQSQVESAKARLRLALTRLNSFEQLYKAGAETRDRRDEAKAEADTARANLREVQKRL-- 224

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             L       E       + E      L       E    + Q +   A+   +  ++  
Sbjct: 225 QILRQGSQPAEVLRAKADVAEARQAYQLMQKGSRPEA---ILQAKAAVAEAQGRQQVVMT 281

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYIRAKVTPK 337
                 I +P AG I   +  +   +           S     IV  ++   + A V   
Sbjct: 282 QVNDTIIRAPFAGIITQ-KFATEGAFVTPTTTASSTSSATSTSIVALAQKLEVLATVPEI 340

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I  ++ G +  +R   + D     FK  +  + P   ++ N       ++V + IT   
Sbjct: 341 DIGQIRPGQSVEIRADAFPDQ---VFKGRVRLVSPEAIEEQNVTS----FQVRVNITS-- 391

Query: 398 FSDNNIELRNGF 409
                 +LR+G 
Sbjct: 392 ---GQDKLRSGM 400


>gi|310765766|gb|ADP10716.1| microcin H47 secretion protein [Erwinia sp. Ejp617]
          Length = 396

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 59/407 (14%), Positives = 134/407 (32%), Gaps = 62/407 (15%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF---EDIETTDLIDLKK 100
           V+ +GEI +      + S   G++ K  V  G  I  G P+      +   +  + D ++
Sbjct: 25  VNVTGEISSYPRAANVYSSVQGVVVKQFVTAGQVIKAGAPVYQIGVSKSTHSGVVSDNQR 84

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             I +    I+   S L              ES ++  LD LGK  +  +  F      +
Sbjct: 85  RDIASQMTRIEQIISRL--------------ESNKKNTLDMLGKQKAQYTSAFQRSTDII 130

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           + +                         R  +   ++++   +    K  ++++ L  Q 
Sbjct: 131 HHA-------------------------REGIRIMKENMENYRQYQTKGLITKDQLTSQV 165

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            + Y+    L     + +     I  L  + +++ A+Y  +I +   Q      + ++  
Sbjct: 166 ALYYQQQNSLLGLSGQNEQNALQITALESQIHIQAADYDNQIYQMELQRYERQKELLN-- 223

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQI 339
                      + +   G I      +          L++I+P++     +   +    I
Sbjct: 224 ---IDAGGAIIVRALADGRIDSLSV-TVGQMVNAGDSLLQIIPNNIDHYSLVLWLPNTAI 279

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI-----------ISQQDNNLQTQEYYE 388
            +V       +R+  +   +  +F   +  I               + +D    +  YY+
Sbjct: 280 PYVNVSDRVNIRYEAFPKEKFGQFAGTVSIISKTPASPQEMMTWQGAPKDGPTASIPYYK 339

Query: 389 VILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
           VI++    +       + L NG  A+     +   + Q ++ P  D 
Sbjct: 340 VIVRPEKQSVEYSGKRLSLENGMKAQSTLFLEERKIYQWMLSPFYDM 386


>gi|300725259|ref|YP_003714588.1| putative Colicin V secretion protein [Xenorhabdus nematophila ATCC
           19061]
 gi|297631805|emb|CBJ92526.1| putative Colicin V secretion protein [Xenorhabdus nematophila ATCC
           19061]
          Length = 425

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 104/307 (33%), Gaps = 13/307 (4%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           + ++ L K  +  SK  +   +    +      ++++       L+N         +  +
Sbjct: 121 ETVELLNKQRNALSKKLDIAANESKANKIYLSEKIKNKQQEIESLQNLIETSEKQQAWFE 180

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           K   +  N  +K      +   +++  Y STL +     +   +L  + +L ++ ++   
Sbjct: 181 KKSNLYANFKKKGIALDAEWINRKKDYYASTLSISSAKVKVIALLGELQDLKNDVSVIDR 240

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              KE +    +     AD   K+ I EK +E   I++P  G I    +          Q
Sbjct: 241 KLDKETASLTVE----IADIAQKILITEKQKEYL-IVAPFDGMITSVTAH-IGERVTAGQ 294

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP---- 372
            +  ++P      +        +  V  G    +R   Y      K   IIE I      
Sbjct: 295 QIAVLIPQGATEKVELFSPSDSLGEVTSGQQVRMRVSAYPYQWYGKIAGIIETISAAPVN 354

Query: 373 IISQQD--NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           + SQ         +  + ++++   L     NI L  G   E     K   L + +  PI
Sbjct: 355 VTSQMQMKGEEVKKGLFRIVVQ-PKLTGQQTNISLLPGMEVETEIYVKTRKLYEWLFIPI 413

Query: 431 TDNWPKI 437
              + + 
Sbjct: 414 KGAYERA 420


>gi|189465306|ref|ZP_03014091.1| hypothetical protein BACINT_01654 [Bacteroides intestinalis DSM
           17393]
 gi|189437580|gb|EDV06565.1| hypothetical protein BACINT_01654 [Bacteroides intestinalis DSM
           17393]
          Length = 432

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 62/444 (13%), Positives = 139/444 (31%), Gaps = 44/444 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +    P +L R  +    G++ L+            VS+   I  E   V I +  SG
Sbjct: 17  QEILTRPPHALIRWGITVFFGVLALLFIGGSFFKYPDIVSAGITITTEHPPVWIVARGSG 76

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I++   ++   I  G  +   E+   T  +             ++ ++    F+     
Sbjct: 77  KIQEVYRKDRETIKAGDIIAVLENPAITAHV-------------LELKERITSFILTDSC 123

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYG----ISSVYRSLKMKLTRMRSIYLNRLDL 181
           + +  F   + +L +    Y S    + +Y     I    +  +     ++        L
Sbjct: 124 ICQTVF-PEKPELGNIQNAYASFIKCLTDYRNFLSIDLYAQKEQAACKELQEYQKYIRHL 182

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQK 238
             ++ L    +       +  K LF+K  +S+ D  + ++          +L  ++   +
Sbjct: 183 NKQAELDEEQVQIASATHSREKKLFDKGLISKADYEEAQQTYLNRRQGREQLMTSLSSAR 242

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + +   E  +E       IS  L+               +          SP +G
Sbjct: 243 IQEAQLQQNIVEIRMERNREANTISTSLKSALNDLQ------VSISDWELGYLFTSPASG 296

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYAD 357
            + YN  +  +        +  IV  +    I + K+       V  G    +    Y  
Sbjct: 297 ILSYNNIWQKNQNVNAGDKVFSIVASTPGDIIGKIKLPVSGSGKVCPGQRVNISVTGYPY 356

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL-----RNGFPAE 412
           +        +  +  + S+ +        Y V + +     +    +L      +G  AE
Sbjct: 357 MEFGFLTGEVLSVSLLASEDNM-------YTVTVSLPQNLCTSYGKQLDFKGELSG-TAE 408

Query: 413 VLFTAKNTTLAQEIIHPITDNWPK 436
           V+      ++   ++ P+   W K
Sbjct: 409 VM--TDERSVTARLLSPLRYLWEK 430


>gi|318606413|emb|CBY27911.1| hlyd family secretion protein [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 90

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 34/90 (37%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +  +  L ++G+I +  W+    ++      G++        I+S   GII +  V  G+
Sbjct: 1   MSAIVWLMLVGMIVMFIWAYFAILDEVTVGIGKVTPSSRTQLIESLDGGIINELLVHEGA 60

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            I +G  L   +              ++ L
Sbjct: 61  IINKGQILARLDPTHFQSNYGEAAARVRTL 90


>gi|166366831|ref|YP_001659104.1| HlyD family secretion protein [Microcystis aeruginosa NIES-843]
 gi|166089204|dbj|BAG03912.1| putative HlyD family secretion protein [Microcystis aeruginosa
           NIES-843]
          Length = 485

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/346 (12%), Positives = 108/346 (31%), Gaps = 45/346 (13%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G ++ ++ V  +    +G I+   V++G Q+ QG  +   +  +    ++     + + +
Sbjct: 58  GTLIAQERV-SVSPQITGRIRTIFVKSGDQVTQGQKIAELDPEQQQQQVNAGIGQVNSAK 116

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            +++  ++ L                          +     ++     I+    ++   
Sbjct: 117 ANLNASEADL--------------------------RQRQAQARANKAQIAQNRANVANA 150

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              ++S        E      RA L   +K+L   + L ++ A  Q DL+ + R +  + 
Sbjct: 151 EANVKSQIATLSAAEADLQRARANLDLAEKNLKRAEFLVKQGAQPQQDLDDRRRDIQAAK 210

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR-------------TFA 274
            E+      +    + +                 I  +L   Q+               A
Sbjct: 211 AEVEARSQNRDAARQQVTAARATLQANQEALNIAIQNELASRQQVAAAAATVNSRQAAVA 270

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
               +L    +     TI +PI G +         +     + L  +  ++K   +  ++
Sbjct: 271 SAEGQLGATRQNLVFNTITAPIDGFVGDFNQRKVGDIISLGEELTSLT-NNKTLELNVQI 329

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             +    ++ G    +             +  +  I P +SQ   +
Sbjct: 330 PVELQPRLRVGLPVEI----INPDGSPGVRGQVTFISPTVSQATQS 371


>gi|126656746|ref|ZP_01727960.1| Secretion protein HlyD [Cyanothece sp. CCY0110]
 gi|126621966|gb|EAZ92674.1| Secretion protein HlyD [Cyanothece sp. CCY0110]
          Length = 458

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 59/388 (15%), Positives = 130/388 (33%), Gaps = 66/388 (17%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           ++G +  +  +V +    +GI+++  +E G  + +G  +   +D      +   +  +  
Sbjct: 3   ANGTVEPK-KLVNVSPKNAGILRELFIEEGDYVKKGQLIAKMDDSNLLGQLIESEGKLAE 61

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            + ++                               +    S         +  +  +LK
Sbjct: 62  AQANLR----------------------------KLINGNRSQEIAQAEAKLEQLEANLK 93

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
             +T  RS  + +   + +    +A     + +    + LF++ A+SQ  LN+Q  I   
Sbjct: 94  KLITGNRSQEIAQA--QARLINAQATFEQAEDEFKRDEILFKEGAISQLTLNEQRAIRDS 151

Query: 226 STLELRENIHE-----QKNMLRHINELYDE--ANLEFANYLKE--ISRDLEQNQRTFADE 276
           +  E+ E   E     +      I E   E  A  E  + L+E     ++ Q +      
Sbjct: 152 AKAEVTEAEEELSLMNEGTRQEDIEEARAEVKAQTEALSLLEEGTREEEIAQARAEVQST 211

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-----------SQPLMKIVPHS 325
              L  ++   E   I +P  G I  ++      +              S  ++ +   +
Sbjct: 212 KGSLQTIKTEIEDTMIRAPFNGII-SSKYADPGAFVTPMTSGSAVSSATSTSILSLASEN 270

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           ++      V+   I  +K G    +    +  I    F+  + +I P  + Q N      
Sbjct: 271 EIL---TNVSENNIAKIKVGQAVGIEADAFPGII---FEGKVSQIAPQATVQQNVTS--- 321

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            +EV + ++  A       LR+G    V
Sbjct: 322 -FEVKVDLSQEAQQQ----LRSGMNVSV 344


>gi|146299057|ref|YP_001193648.1| hypothetical protein Fjoh_1297 [Flavobacterium johnsoniae UW101]
 gi|146153475|gb|ABQ04329.1| hypothetical protein Fjoh_1297 [Flavobacterium johnsoniae UW101]
          Length = 431

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/365 (13%), Positives = 124/365 (33%), Gaps = 15/365 (4%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               + + +II I+  ++W   +     V++   I       +I S  SG I+   V+N 
Sbjct: 28  RWGTVMIFAIIVILFFVSW--FIKYPDVVNTEIIITTNIPPEKIVSKSSGRIEAILVKNK 85

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           + + +   L   E+      + L K    +           ++    ++   +       
Sbjct: 86  AIVSKNKTLAVIENTANYKDVFLLKSITDSY---------NINDPQAQFPFSKLKNTQLG 136

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E    +        ++  N+ +       + +++    I      LE +  +  + L   
Sbjct: 137 EIESAYAVFQKDYQAQQLNHDLQPFAIENRAQVSEKIQIKERLEILEQQKVINESELQLQ 196

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++   + LF K  +S  ++  ++    ++    R  +     +   + +    +    
Sbjct: 197 KNEIARFEVLFNKGIISAQEMEAKKLGFLQAQKSYRGLLSSISQLKSSLIDNTKSSQNSH 256

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            N  KE   ++   +           +++       + S I+G + + Q ++ +      
Sbjct: 257 INSTKE---EVNLGRNMAQSFFQLKKVIKDWELAYALKSSISGKVTFLQIWTENQTINSG 313

Query: 316 QPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
             +  I+P +K  +I + K        +K G    +R  ++ D      K  I+ I  + 
Sbjct: 314 DNVFSIIPDAKNGFIGKVKAPALNSGKIKIGQRVNIRLANFPDKEFGVLKGKIQNISLVP 373

Query: 375 SQQDN 379
            +  N
Sbjct: 374 DKDGN 378


>gi|283782477|ref|YP_003373232.1| efflux transporter, RND family, MFP subunit [Pirellula staleyi DSM
           6068]
 gi|283440930|gb|ADB19372.1| efflux transporter, RND family, MFP subunit [Pirellula staleyi DSM
           6068]
          Length = 630

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 80/434 (18%), Positives = 157/434 (36%), Gaps = 90/434 (20%)

Query: 23  LSIIGIIGLITWSILL----PIEI---------------SVSSSGEILNEDN---VVEIK 60
           L+++GI   + W++      P+E                 V+  GEI N  N     E+K
Sbjct: 36  LTVLGITAAVVWAVFFREVKPVEGSGPIVNTVSQGAYEFVVTEQGEIENSSNIELRCEVK 95

Query: 61  SPFSGIIKKFQVE-NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           S  +G +   +V   G+ + +G  L+  +    +  +DL++V                  
Sbjct: 96  SRNNGGVTILEVVPEGTLVQKGDVLVRLD----SSSLDLERVQ----------------- 134

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                          ++   +                  S    L+    +   + L  +
Sbjct: 135 ---------------QQITCNTSNSLVIQARNTLEAAKISRIEYLEGTFKQEEKLILAEV 179

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +  ++      L S Q  L   + L  KN V+   L   +  V K+  EL     + + 
Sbjct: 180 FVAEQA------LRSAQLALESAQRLAAKNIVNPLQLEGAQFAVDKARNELEAAQTKLEV 233

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           + ++  E   +   +F + +      L   + ++  E+ KL  +E+     TIL+P AG 
Sbjct: 234 IRKYTREKMLK---QFDSDIATSEAKLSAEENSYQLELDKLKDVERQIAGCTILAPAAGQ 290

Query: 300 IVYNQSFSSS-------NYAQQS------QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           +VY   FSS           +        QPL+++ P S L +++A +   +I  V+ G 
Sbjct: 291 VVYANKFSSGRSGSTAEFVVEAGATVREQQPLIRL-PDSNLMHVKALINEARITLVRPGM 349

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
             T+R      I ++  +  + K++        +    + Y   ++I D   +     LR
Sbjct: 350 PVTIRVDA---ITDELLRGEVTKVNQYAEPGGWSSGNVKKYAAFIRIFDPPTA-----LR 401

Query: 407 NGFPAEVLFTAKNT 420
           +G  AEV    ++ 
Sbjct: 402 SGMNAEVRIHVESR 415


>gi|186683278|ref|YP_001866474.1| RND family efflux transporter MFP subunit [Nostoc punctiforme PCC
           73102]
 gi|186465730|gb|ACC81531.1| efflux transporter, RND family, MFP subunit [Nostoc punctiforme PCC
           73102]
          Length = 486

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 58/385 (15%), Positives = 131/385 (34%), Gaps = 47/385 (12%)

Query: 49  EILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            I     +  I+S        GI+ K  VE G ++ QG  +   ++ E    +   + S+
Sbjct: 65  RITATGKIQPIQSVNISPKNPGILAKLYVEQGQKLQQGQIIAQMDNSEIKTQVIQYQASL 124

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +   ++                 SR E + +         +++      +  + 
Sbjct: 125 DQAKAQLAESQAG----------------SRPEDIAEAKAHVAEAEAQLTVVREGNRLQE 168

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           ++    ++ S        + +    + L  +       ++    ++  ++  L + +R  
Sbjct: 169 IEQAQAQVDSAQAQMELTQARLKRYQELAKAGAISQDSLEQYTSEDRQAKASLEEAQR-- 226

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            + +L+   N +E     + I     EA  +  N  +    +L + + +  +  +KL   
Sbjct: 227 -RLSLQKSGNRNEDIKRQQAIVAQEREALRKLQNGSR--PEELTRLRASVVEANAKLEQQ 283

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYA--------QQSQPLMKIVPHSKLTYIRAKVT 335
           +       I +P +GT+   +  +   Y           S     I+  +K   + AKV 
Sbjct: 284 QVQLADTIIRAPFSGTVTQ-KYATLGAYVSPAISASSDASATSTSIIALAKGLEVVAKVP 342

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              I HVK G    +    YAD     F   +  I P    + N       ++V +++  
Sbjct: 343 EVDIPHVKVGQKVELIIDAYADE---VFHGYVRLISPEAIVEQNVTS----FQVRVQLDT 395

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNT 420
            +      +LR+G   + +     T
Sbjct: 396 ES-----EKLRSGMNVDNVIFIGKT 415


>gi|291500670|gb|ADE08259.1| PlnH [Lactobacillus plantarum]
          Length = 458

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 63/435 (14%), Positives = 157/435 (36%), Gaps = 35/435 (8%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            + +   + +IG I +S++   EI ++ +G +     V  I++  +  IKK  +  G+++
Sbjct: 22  LLIIPVTLLLIGTILFSLVAKREIVINGTGTVQPIGTVPVIQATVNSAIKKNYLVEGARV 81

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  LL + ++   + +    VS + L+  +       D +N   DV     E    +L
Sbjct: 82  KKGQKLLVYTNVFNRNKLREDNVSKRQLQRQVTALDHFKDGINTDSDVFPTTDEFGYREL 141

Query: 139 LDF---LGKYHSTCSKVFNYGISSVY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           L+      + + T +++     S+   +   +  T  + +   + +L+   +L  A+ + 
Sbjct: 142 LESYLKQRQIYLTENQMLAAKSSAASTKKATLTKTAQQVVSNTKTNLDAYQALYNAVANG 201

Query: 195 HQKDLTMMKNLFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            +   +          V++    N+ N ++ +   +  ++++ I   ++ L       +E
Sbjct: 202 SKYANSAKYGSVFNEYVAKSKEANNANDKKEVKSATLADIQQQIDTLQDSLSSAKVQLEE 261

Query: 251 AN-----------------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                              +   + L E++    + ++      + +  L    +  TI 
Sbjct: 262 LQDFDDTKYSVETNNTKLAMLKNDQLSEVAEKRMKAEQDLRTVKADIDSLTTQSKSYTIK 321

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +  AG +    ++  + Y      + KI+P     +   ++  ++   I  VK       
Sbjct: 322 ATKAGVLHVADNYRGAKYVSSGAEIAKILPIIKQQRRVNVKLYISTADISSVKVKQAIRF 381

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           +       +      ++ KI     ++        +YEV   +     +D    LR G  
Sbjct: 382 KVTR-NVPKPIILDGVVTKIGVSPVEESKAT----FYEVTAAVP--ITADQAQLLRYGMI 434

Query: 411 AEVLFTAKNTTLAQE 425
           A+        T    
Sbjct: 435 AQTTIITGKVTWFDY 449


>gi|226328273|ref|ZP_03803791.1| hypothetical protein PROPEN_02167 [Proteus penneri ATCC 35198]
 gi|225203006|gb|EEG85360.1| hypothetical protein PROPEN_02167 [Proteus penneri ATCC 35198]
          Length = 261

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 92/242 (38%), Gaps = 20/242 (8%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            +    P    R+  + I + +I  I W+ +  +++  S+ G+++      +I+      
Sbjct: 30  AVLEKLPTPYSRIIAIIISLSVIIFILWAYIGKLDVLSSAIGKLVVSGYSQQIQIYEHSR 89

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+NG Q+ +G  LLT + +   + I+  K  I+NL             L  +Y  
Sbjct: 90  LTAIHVKNGQQVSKGEALLTLDILGVDEEINNLKNKIENLLL-----------LKIRYQA 138

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           L +          + L + +     + +         S+      + +   N+L    + 
Sbjct: 139 LSQITLPDTFPQFNLLNEKNKESILLSYKKEKDEFDASINNINAEIETNNKNKLLTHQEI 198

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVS-------QNDLNQQERIVYKSTLELRENIHEQK 238
             L  L  + +    + K L++K  +S       Q++L +  R + + + EL     ++K
Sbjct: 199 DSLNKLKKNIENRFNIKKTLYDKKIISTMEFLENQHELLEINRFIKRKSSELIILSSQEK 258

Query: 239 NM 240
             
Sbjct: 259 KA 260


>gi|288817349|ref|YP_003431696.1| multidrug resistance efflux pump [Hydrogenobacter thermophilus
           TK-6]
 gi|288786748|dbj|BAI68495.1| multidrug resistance efflux pump [Hydrogenobacter thermophilus
           TK-6]
 gi|308750956|gb|ADO44439.1| secretion protein HlyD family protein [Hydrogenobacter thermophilus
           TK-6]
          Length = 375

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 123/361 (34%), Gaps = 49/361 (13%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + K   + G ++ +   +   +  +    +   +  I++L    +   + L  ++ +
Sbjct: 53  SGRVIKLYKDLGDEVKKSEVIAEIDPTDYQLNLQNIRAKIESLEAQKEQLLTQLTRVSQE 112

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             V                           NY +S +           + +      LE 
Sbjct: 113 LSV---------------------------NYSMSDISA---------KEVKKREQALEK 136

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + S ++A L   QKD    KNL E+  + +    + +        +    +   + +   
Sbjct: 137 QLSQVQAQLELAQKDRERYKNLLERGVIPRRTFEEADTRYKVLKDQEESLLKSLEELRLS 196

Query: 244 INELYDEANLEFANY--LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             +  +  +L    +   KE+   +E  ++       +  + +       + +P  G +V
Sbjct: 197 YKKSLENVSLSRIAFLKQKELKAQVEALEKEIESLKKQEELAQNYLSNTKLTAPFDG-VV 255

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +  S  +      P+  IV      Y+   +   +++ V+KG  A VR   Y +   K
Sbjct: 256 AKRYVSVGDVVSPGSPVYAIV-KPDSMYVEVLLEESKLRGVQKGCKAYVRLDAYPN---K 311

Query: 362 KFKAIIEKIDPIISQQ----DNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLF 415
            F+ ++E+I P  +        ++   E+ +V   + +       +   LR G   EV  
Sbjct: 312 VFEGVVEEISPASAATFALVPRDISAGEFTKVVQRIPVKIRIIKGDASLLRVGMGGEVEI 371

Query: 416 T 416
            
Sbjct: 372 K 372


>gi|166364016|ref|YP_001656289.1| ABC-transporter DevB-like protein [Microcystis aeruginosa NIES-843]
 gi|166086389|dbj|BAG01097.1| ABC-transporter DevB-like protein [Microcystis aeruginosa NIES-843]
          Length = 412

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 126/350 (36%), Gaps = 47/350 (13%)

Query: 42  ISVSSSGEILNEDNVVEIKS---PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +V++ G +  +  + +I +        + K  V+ G ++ +G  +   ++         
Sbjct: 37  EAVAALGYLEPQGGITQISATAFLEGSRVDKILVKQGEKVAKGEIMAILDNN-------- 88

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                  LR  +   ++ L    +K + + +  +  E    D   +      +      +
Sbjct: 89  -----ARLRAALKQAQANLGLAASKLEKVREGAKKGEIMAQDSRMRQSKAELEGQIMRQT 143

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +   SL+ +L         +L  +     ++A L++   D    ++L+   AVSQ +  +
Sbjct: 144 AAISSLESELEG------EKLGQKATVERIKAELNNSLTDCQRYQSLYRNGAVSQGEKER 197

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                  +   L+E     + +   + +   EA       L  + + +++NQ   +    
Sbjct: 198 FCLEATTTQKRLQEAEANLQRITTTLEQKIQEARANLQRTLNTLEQQIQENQAMLSAVTE 257

Query: 279 ----KLTILEKT--------------REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                L I +                 E   + +P AG I+   +F      + ++ +++
Sbjct: 258 IRPVDLQIAQDEVMTAKANVERAQAELELSYVRAPHAGIILKINTF-PGELVK-NEGILE 315

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +  + +  Y+ A+V    I  VK G + T++     D      +  +E+I
Sbjct: 316 LG-NIQKMYVTAEVYETDISRVKLGQSVTIK----TDKMLGDLEGTVEEI 360


>gi|295136226|ref|YP_003586902.1| secretion protein HlyD family protein [Zunongwangia profunda
           SM-A87]
 gi|294984241|gb|ADF54706.1| secretion protein HlyD family protein [Zunongwangia profunda
           SM-A87]
          Length = 381

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 64/393 (16%), Positives = 123/393 (31%), Gaps = 71/393 (18%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
            + +++  SS G I        + S  SG +    +EN   + +G  LL  E     + +
Sbjct: 44  FIKVDVYTSSQGIIKPNLERSSVSSINSGRVVYSNIENNKTVKKGDTLLFIESTIIDEQL 103

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              +  I  ++ +                         ++ L   L   +   S++ +  
Sbjct: 104 SFSRDQIVEIKEY-------------------------QKDLRYLLAYNNPILSRISSNK 138

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
             S +                 L+ E      +  L   +K     K LF K  ++ ++ 
Sbjct: 139 YRSDF-----------------LEYEQLLIEAQTKLDRLEKKFIRHKTLFNKGVIAASEF 181

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              E               E      +I  L  +   ++ + L   +  LE  Q      
Sbjct: 182 ENIE--------------SEYNLTKSNIQTLKSQQKNKWQSQLISYNDKLEDIQSNTKQL 227

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
           +       + + Q  I +P+ GT++  +  S  ++  Q   L +I P S        ++P
Sbjct: 228 L-------QNKSQYFITAPVTGTLMNTRYLSQGSFISQGTQLAEISPSSD-LIAECYISP 279

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             I  + K      +   Y   +       I +I+  I   DN       +++  KI + 
Sbjct: 280 SDIGLIDKTNQVIFQIDAYNYNQWGLAHGEILEINKDIELMDNT----PLFKIRCKIEEK 335

Query: 397 AFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
                N    EL+ G      F     TL Q +
Sbjct: 336 HLKLKNGVKGELKKGMTFTSRFLITKRTLYQLL 368


>gi|253988824|ref|YP_003040180.1| microcin h47 secretion protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780274|emb|CAQ83435.1| microcin h47 secretion protein [Photorhabdus asymbiotica]
          Length = 428

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 55/401 (13%), Positives = 126/401 (31%), Gaps = 57/401 (14%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           GEI  +   V I +P  G I +  +  G  + +G  L   +  + T+   +   +   L 
Sbjct: 60  GEITTQPRSVNIFAPQQGFISQRFINVGEVVEKGQRLYQIDVSQVTESGKVSANTRHALE 119

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +                                    +    +      +   +L   
Sbjct: 120 SQL------------------------------------AQVDNIIQKLRDNKRTTLDNI 143

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             + +         +     +R  +   + ++   K+  ++  ++++ L+ Q    Y+  
Sbjct: 144 RMQKQQYEAAHQQSKRVLDNVRQGVEFAKNNMQSYKDYQQRGLITKDQLSSQTYSYYQQQ 203

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              +    +       I  L  E     A++  ++S   E  +     +++++       
Sbjct: 204 SLFQNLYSQHIKDSLQITNLDSEIVTRAADFDNQLS-QYELQRNNLQGQLAEVNA----N 258

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH-SKLTYIRAKVTPKQIQHVKKGY 346
               I +P  G I      +          L ++ P+ +   Y+   +    I +V  G 
Sbjct: 259 GTLIINAPTNGRIESLSV-TLGQMVNMGDSLAQLTPNINATYYLVLWLPNSSIPYVSVGD 317

Query: 347 TATVRFPHYADIREKKFKAIIEKID--PIISQQ----------DNNLQTQEYYEVILKIT 394
              +R+  +   +  +F   IE I   P   Q+           +N QT+ YY+V++ + 
Sbjct: 318 VINIRYDAFPFEKFGQFSGRIENITYAPASIQEMATYSSPPVYQSNAQTESYYKVMVALD 377

Query: 395 DLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
              F      ++L NG   +     +   L Q +     D 
Sbjct: 378 KSRFSYQGKELQLTNGMRTQSTLFLEKRPLYQWMFSSFYDM 418


>gi|251790935|ref|YP_003005656.1| secretion protein HlyD family protein [Dickeya zeae Ech1591]
 gi|247539556|gb|ACT08177.1| secretion protein HlyD family protein [Dickeya zeae Ech1591]
          Length = 373

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 57/377 (15%), Positives = 130/377 (34%), Gaps = 64/377 (16%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
               GE++   + V      +G +    V +G  I +   L   +D +    +  ++ ++
Sbjct: 52  ARVMGEVIPLASRV------NGWVTARPVIDGDVIRKDQLLAQIDDRDARLRLAEQEGNL 105

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                 I   ++     +           + +  L +   K  S+ S V N G       
Sbjct: 106 AAADAQISYSQTQRQVTD----------LTTQAALDEARAKLASSDSAVNNAGY------ 149

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                                       LS  Q +      L + N  ++   ++    +
Sbjct: 150 ---------------------------QLSLAQNNFQRDDQLLKSNLTARKTWDESHTTL 182

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +   ELRE   ++      +N    +      N L+ + + +E  ++      +++  L
Sbjct: 183 LQRQSELREAEAQRGAQHAALNNAQAQ-----RNTLQVLDKQIEMQRQQRIALQAQVDQL 237

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           ++    + + SP+ G +V     +  +YAQ  Q +M +V   +  ++ A +    I  V+
Sbjct: 238 KQEIADRALRSPVDG-VVDRTIVNVGSYAQAGQWIM-LVHDPRNLWVEANIKETAIGRVR 295

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAF 398
            G    ++   Y D   K+    + ++    + Q     +   +  + ++  ++   +A 
Sbjct: 296 VGQQVDIQVDAYPD---KQISGHVIRVGDTATSQFALLPSPNPSGNFTKITQRVPVRIAL 352

Query: 399 SDNNIELRNGFPAEVLF 415
            D N  L+ G  AEV  
Sbjct: 353 DDPNSGLKPGLMAEVSI 369


>gi|307592193|ref|YP_003899784.1| DevB family ABC exporter membrane fusion protein [Cyanothece sp.
           PCC 7822]
 gi|306985838|gb|ADN17718.1| ABC exporter membrane fusion protein, DevB family [Cyanothece sp.
           PCC 7822]
          Length = 444

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 51/352 (14%), Positives = 125/352 (35%), Gaps = 34/352 (9%)

Query: 42  ISVSSSGEILNEDNVVEIKSPF------SGIIKKFQVENGSQILQGTPLLTFEDIET-TD 94
            +VS+ G I  E  V+ +  P          I+K  V+ G  +  G  +   +++ T T 
Sbjct: 66  KAVSALGYIKPEKEVIYLSGPTFLNTIGGNRIEKLLVKEGDYVKSGQLIAILDNVSTLTA 125

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   +  I   +  ++  K+       + +  +  FE ++ +L         T  +   
Sbjct: 126 ELSYAEEQITIAQARLEQVKAGAK--KGEIEAQQARFEGKKAEL----EGQIKTQRETIA 179

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              + +      +  ++ SI     + + +    + L  +     +  + +  K   +Q 
Sbjct: 180 TLQAQLLGEENSQNAQIGSIQAELENAQAECKRYQLLYDNSVVSASDQEAICLKEKTNQK 239

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLEQNQ 270
            L + +  +++  L  +  I E K  L       ++   E  + L++I+     D++  +
Sbjct: 240 KLEEAQASLFRIQLSRKAQIEEAKANLNRTISTLEKQIQENESVLQQIAEVRPTDVKLAE 299

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-----SSSNYAQQSQPLMKIVPHS 325
                 ++     ++T E   + +P +G I+   +      S+       Q         
Sbjct: 300 AEVKSAIANAKKAKETVELAYVRAPHSGQILKIYTHDGERISNQGIVSIGQT-------- 351

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
               + A+V    I  V+ G TA +    ++     +    + ++   I +Q
Sbjct: 352 AQMAVTAEVYELDISRVRLGQTAKITSSAFS----GELFGKVIQVGLEIGEQ 399


>gi|172039028|ref|YP_001805529.1| devB-like ABC transporter membrane fusion protein [Cyanothece sp.
           ATCC 51142]
 gi|171700482|gb|ACB53463.1| devB-like ABC transporter membrane fusion protein [Cyanothece sp.
           ATCC 51142]
          Length = 439

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 49/339 (14%), Positives = 124/339 (36%), Gaps = 22/339 (6%)

Query: 42  ISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIETT-DLID 97
            ++S+ G +     V+ +  P       I++  V+ G ++  G  L   ++I+T      
Sbjct: 62  ETISALGRLEPLGEVINLAPPPTQGGAKIEQLLVKEGDKVKVGQTLAILDNIDTKKAAFK 121

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF---- 153
             +  +K  + +++  K+       + +  E   +  E +L   L    +T +++     
Sbjct: 122 TAQEEVKVAQANLEIVKAGAKL--GEIEAQEATIQQLEAELQGELSTNQATLARLEMELE 179

Query: 154 --NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                 ++    LK +L   +  Y    +L     + ++ L   Q +L   +    +   
Sbjct: 180 GEKRQQTATIERLKAELKDAQREYQRYENLAGNGVISQSELEQRQLELDQARESLREGQ- 238

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
                 +  + +     E+     + +  +  +N+    A        +    D+++ Q 
Sbjct: 239 -----ERLSKTINTLQEEIAAEQSQSRKEVNSLNQQIIAAKANLNRIAEIRPVDVQKAQA 293

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                M++L   +   +   I SP+ G ++   ++        +  ++++    K+  I 
Sbjct: 294 ELDRAMAQLEDKQTDLDLAYIKSPLDGQVLKIHTY-PGEKVDDNDGVLELGKTDKMMVI- 351

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           A+V   +I  VK G  A V+     +      +  ++KI
Sbjct: 352 AEVYESEINKVKIGQKAIVKSD--NNSFSGTLEGTVQKI 388


>gi|253989805|ref|YP_003041161.1| hypothetical protein PAU_02325 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781255|emb|CAQ84417.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 323

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 49/302 (16%), Positives = 102/302 (33%), Gaps = 14/302 (4%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           ++   L    +   +       +  +        +++     L+L+N  +     ++   
Sbjct: 13  EITSALKSQKTAIKREIMLKSEASDKESDFLTQLLKNKEAEILELDNLITKSTEQVAWLF 72

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
               +   L  K    + D  ++    Y ++++L       K     +     +     A
Sbjct: 73  DKAQLFNKLVGKGIALETDHIERRSDYYTASVQL----AAYKREKVKLQGESIDIRARLA 128

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                +    E  +R  A     L   E+ RE   I SPI G +            + SQ
Sbjct: 129 TIHIGLETSRETLRRDIARLDQDLVSTEERRE-LYITSPIDGKLTGITGL-VGKRIRSSQ 186

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  +VP S    +    T + I  +++G +  +RF  Y      +   I+  I   + +
Sbjct: 187 ELASVVPTSGRPKVEIFSTSEVIGELREGQSVKLRFDAYPYQWFGQHDGIVTAISTTLVE 246

Query: 377 ------QDNNLQTQEYYEVILKITDLA--FSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                  +NN Q + Y++V ++        + N   LR G   E     +   + + I+ 
Sbjct: 247 GSLGTRDENNRQQKRYFQVHIRPKSDGVLLAGNIHPLRPGMGVETDIFIRKRPIYEWILL 306

Query: 429 PI 430
           P+
Sbjct: 307 PL 308


>gi|1197459|gb|AAA88773.1| MtfA [Escherichia coli]
          Length = 414

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 53/411 (12%), Positives = 122/411 (29%), Gaps = 66/411 (16%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             GEI      V + S   G++ K  V  G +I +G P+   +  ++T    +     ++
Sbjct: 44  VEGEITTWPRPVNVYSGVQGVVIKQFVTEGQRIKKGDPIYLIDVSKSTSSGVVGDNKRRD 103

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           +   +      +  L        +  E +  Q      +      +              
Sbjct: 104 IEKQLSRIGDIISRLEENKKTTLQTLEKQRIQYYSAFERSTEILRRA------------- 150

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                                     +   + ++   K    K  ++++ L  Q  + Y+
Sbjct: 151 -----------------------EEGVKIMKSNMDNYKQYQTKGLINKDQLTNQIALYYQ 187

Query: 226 STLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISRDLEQNQRTFADEMSKLTI 282
               +     + +  L  +  L  +      EF N + ++     + Q+   D       
Sbjct: 188 QQNNILSLSTQNEQNLLQVTSLESQMQTLAAEFDNRIYQVELQRYELQKELVD------- 240

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQI 339
                    I +   G I      +          L++I+P    +    +   V    I
Sbjct: 241 -TDAGRDIIIRALSDGKIDSLSV-TPGQMVSVGDSLLQIIPEEIKNYHLIV--WVPNNAI 296

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI-----------ISQQDNNLQTQEYYE 388
            ++  G    VR+  +   +  +F A I  I               + ++N   +  YY+
Sbjct: 297 PYISVGDNVNVRYEAFPPGKFGQFTAKIMLISRTPASAQEMQTYPGAPRNNTGVSVPYYK 356

Query: 389 VILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           ++L      + + +  + L NG  A+     +   + Q ++ P  +     
Sbjct: 357 IVLNPEQQTIEYGEKKMPLENGMKAQSTLFLEKRKIYQWMLSPFYNMKYSA 407


>gi|297616299|ref|YP_003701458.1| efflux transporter RND family, MFP subunit [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297144136|gb|ADI00893.1| efflux transporter, RND family, MFP subunit [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 482

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 59/441 (13%), Positives = 135/441 (30%), Gaps = 126/441 (28%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITW----------------SILLPIEISVSSSG 48
           +W  L +      K   +   + ++G+  W                +    I  + ++SG
Sbjct: 8   VWSRLSKKT----KLAAVAIAVLLVGIAGWKLIGAGSKDTGYITYQASYADIVQTATASG 63

Query: 49  EILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++        ++S        G +++ +V+ G  +  G  L                   
Sbjct: 64  QVEP------VQSVTLTFKSQGYVQECKVKVGDTVKAGQVLAV--------------ERS 103

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           ++L   ++  +++LD     Y+ L  A+  +  Q                          
Sbjct: 104 EDLETALEQAQASLDNARASYNRLVSAYPHKVAQA------------------------- 138

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                             + +    ++ L   + +    + LFE   +SQ+DL       
Sbjct: 139 ------------------QAQVDQSKSSLDMAKAEFERAQPLFEAGVISQSDL------- 173

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +    +  + + +N L ++    D+ ++E A                     +++   
Sbjct: 174 DSARASYQSALSQYQNALSNLELTKDKGDIEVAA-------------AQLKSAEAQVAQA 220

Query: 284 EKTREQKTILSPIAGTIVYNQSFS-----SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +   +   + +P  G +      +     +   ++ S     I   S    + A+V    
Sbjct: 221 QNNLKNCVMTAPFDGFVAAITGNTGQWTAAGTASEASSSQFSITVSSTELQLAAQVNEAD 280

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  VK G   T     Y D    +F   +  + P+ +  +N     + Y+ ++ I D   
Sbjct: 281 ISKVKVGQKVTFTVNAYPDR---EFSGKLLSLSPLATTSNN----VQVYDAVISIDDYQ- 332

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
                +LR G PA +      
Sbjct: 333 -----DLRAGMPASITIIVGE 348


>gi|307153187|ref|YP_003888571.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7822]
 gi|306983415|gb|ADN15296.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7822]
          Length = 518

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 48/400 (12%), Positives = 131/400 (32%), Gaps = 48/400 (12%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC-- 108
               ++  + S  +G + + +V++  Q+ QG  L+  +  +    +   + +++N +   
Sbjct: 123 TVVGHIHPLASRVAGTVSEVRVDDNQQVRQGQILVKLDPQDYQVKVQQARAALENAKQQA 182

Query: 109 -------HIDTEKSALDFLNNKYDV--LEKAFESREEQLLDFLGKYHSTCSKVFN----- 154
                  ++  E ++      + +V        + +  L +      +  + V       
Sbjct: 183 QAAQSNINLAQENASASVTTAQGEVNKARAGITTAQAALAEAQSGVPTAQAAVEEAQAGV 242

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-----------TMMK 203
               +        + R ++ Y     LE +  + R  L   ++               ++
Sbjct: 243 RSAQAQVAQASATVERTQTDYQRYTQLEQEGVIPRQQLDVAREAYRVAVAEQQTANQGVQ 302

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
               K A +Q  + Q +  V ++   + +   E  + + ++ +   +      N      
Sbjct: 303 QAKAKLARAQQGVLQAQAQVAQAQQGVTQAQAELASAIGNLQQAQAKGQQTQVN-----R 357

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
              E  +   +   + L   +       I++P++GT+  +++       Q   PLM IV 
Sbjct: 358 AQYEAARAAISQSAANLKDAQLQLSYTNIVAPVSGTV-GDKTVEVGQKIQAGTPLMAIV- 415

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DN 379
            +    + A     Q++ ++ G    ++   + +     F   ++ I P           
Sbjct: 416 SNDYWVV-ANFKETQLRKMRPGQKVEIKIDAFGNHT---FTGHLQSISPASGANFSLLPP 471

Query: 380 NLQTQEYYE------VILKITDLAFSDNNIELRNGFPAEV 413
           +  T  + +      V +     +       +  G  A V
Sbjct: 472 DNATGNFTKIVQRIPVKVTFDPQSIKGYESRITPGMSAVV 511


>gi|326201346|ref|ZP_08191218.1| hypothetical protein Cpap_4180 [Clostridium papyrosolvens DSM 2782]
 gi|325988914|gb|EGD49738.1| hypothetical protein Cpap_4180 [Clostridium papyrosolvens DSM 2782]
          Length = 625

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 105/314 (33%), Gaps = 22/314 (7%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + +   E    Q+ +  G+Y S  SK     +S + +++      ++         + K 
Sbjct: 317 ITKAELEDARSQMQNSQGEYTSYKSKF----LSELEKNINDIEISIKEKESKLSGTQGKQ 372

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQ------NDLNQQERIVYKSTLELRENIHEQKN 239
            LL       + +L  +  L E+N  +Q      N +    +    S  EL+       N
Sbjct: 373 GLLDLNEKDRKNNLKAL-YLQERNDAAQAIDGLTNTVGTLRQKNVLSDAELKTITDADGN 431

Query: 240 MLRHIN-ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
               +N  L +   ++      E  + +  +     + + KL   + + +   + + + G
Sbjct: 432 NDDSLNYSLVERTKVQEVVAADERIKAITDSITGVNENVKKL---QLSIDNAIVKAGVNG 488

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPH-SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
            +   +     +       ++ I+P  +    ++  V+ K I  +  G T    F     
Sbjct: 489 EVNIIKDIYPGDLVAAGAEILTIIPDTNSAFKMQITVSNKDIGEIHTGDTVKYNFAALPY 548

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVL 414
               + +  I  I        NN + Q YY V   +     L  S    E++ G   E  
Sbjct: 549 REYGQAQGKITSISKDAV---NNPEGQSYYIVEATVPVTKMLGSSGRQGEIKAGMICEAN 605

Query: 415 FTAKNTTLAQEIIH 428
              K  +  +  + 
Sbjct: 606 VITKEKSFLRYFLE 619



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 96/266 (36%), Gaps = 21/266 (7%)

Query: 7   KNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +  + P     +    +IG ++  + W+     EI V + G++  E  +  +++   G
Sbjct: 15  REMYHSKPHPFVWIFTYILIGLVVTAVIWAAFGKKEIVVKAPGQVRPELGISTVRNIVGG 74

Query: 66  IIKKFQVENGSQILQGTPL-------LTFEDIETTDLIDLKKVSIKNLRCH---IDTEKS 115
            +K   ++ G  +  G  L       L  E     + ++  +  + NL+ +   I TE++
Sbjct: 75  ELKSTNLKQGMAVKAGDVLYVIKHDNLLMEKESAEEKLNELEKDLDNLKIYRKCITTEEN 134

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           + D +          FE   + L+D       T  K        +  S ++  +     Y
Sbjct: 135 SFDSVKEPVY-----FEKVRKLLMDIRFSQTDTAYKTTKLSEEKLLNSTQLNKSLAEIEY 189

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           L +          +  L S ++     K  ++K  +++ ++   +R   +   E++ N  
Sbjct: 190 LKK--YIKSLDNNKNYLDSGEEQEKQFKQKYDKYLIAKTEI---QRKYDRQADEIKSNSP 244

Query: 236 EQKNMLRHINELYDEANLEFANYLKE 261
           +         +   +A       + E
Sbjct: 245 DAMKQSFEEEKSQLKAYQTLKKSVSE 270


>gi|59711485|ref|YP_204261.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Vibrio fischeri ES114]
 gi|59479586|gb|AAW85373.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Vibrio fischeri ES114]
          Length = 346

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 69/426 (16%), Positives = 128/426 (30%), Gaps = 93/426 (21%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITW----SILLPIEISVSSSGEILNEDNVVEIK 60
           M +  K+ + A L    +  + G +G   W          + +         + ++  I 
Sbjct: 1   MTELKKKKNKAPLIATVIFILCGALGAGYWYGYGQYFQSTDNAYL-------QGDITTIS 53

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   G I++  VE+  ++  G  L T +D +                             
Sbjct: 54  SKVGGYIQQTLVEDNQKVKAGDLLATIDDRDFLAE------------------------- 88

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                                  +       V    I+++   LK++  R+R        
Sbjct: 89  ----------------------QEKAEANVAVNAAAITNLNAELKLQDIRIRQS------ 120

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
             ++    +A L   Q+ +   K L +KN  SQ++L         +   L+  I      
Sbjct: 121 -ASQIESAQADLERAQQQVKRTKALIKKNYSSQDEL-------DNNVSHLKVAIANLDAA 172

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
             +     ++ N+        I   + Q         + L           I +PI G I
Sbjct: 173 KANYQASKEQINV--------IESQIGQANAMLNQAKTALDQANLNLSYTKIYAPIDG-I 223

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V  +S       Q   PL+ +VP  +  +I A     Q++ +  G    V    Y D+  
Sbjct: 224 VGKRSLREGLLVQAGMPLLSLVPTKE-VWIEANFKETQLEKIHHGQKVFVDLDAYPDLH- 281

Query: 361 KKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              K I+E   P           +      T+    V +KI+ L     + +L  G    
Sbjct: 282 --LKGIVESFSPATGAKFALLPPENATGNFTKIVQRVPVKISILNTDLLDGKLIPGLSVV 339

Query: 413 VLFTAK 418
                +
Sbjct: 340 ATVDTR 345


>gi|221199718|ref|ZP_03572761.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia multivorans CGD2M]
 gi|221208677|ref|ZP_03581677.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia multivorans CGD2]
 gi|221171488|gb|EEE03935.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia multivorans CGD2]
 gi|221179957|gb|EEE12361.1| auxiliary transport protein, membrane fusion protein family
           [Burkholderia multivorans CGD2M]
          Length = 422

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 61/425 (14%), Positives = 142/425 (33%), Gaps = 53/425 (12%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A+   + +   +G+I L  +          + +G ++    +V+I +P  GI+    V  
Sbjct: 35  ATATAVAICIALGVILLFVFGSYTR---RTTVAGVVVPNTGLVKIYAPQPGIVLVRHVTE 91

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  +           +  +  S  N + H     SA          ++K     
Sbjct: 92  GQHVEKGHSMFV---------VSRELHSAANGQTHAALIASAHQRKIALQHEIDKVRILH 142

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             +L     +  +  +++    +    +  +  L    ++  +RL   +  S   A    
Sbjct: 143 RSELDRLHARIANLRAELGRIDVQLASQERRTHLAVDATLRYDRLLANDFISKDEAQQRH 202

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
                    +LF++    Q+ L   +R    S L L + I+E   +         +    
Sbjct: 203 A--------DLFDQ----QSRLQGLKRERAASALALNDAINELSGLGPKHQNQVSQMRRS 250

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             +  + +     + QR F                  + +P +GT+    +      A  
Sbjct: 251 VIDVDQTVIE--SEAQREF-----------------IVTAPESGTVAAVLT-EPGQTADG 290

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DP 372
           S+PL  IVP          V  + I  ++   +  +R+  Y   +  ++ A +  I    
Sbjct: 291 SRPLASIVPDGAHWQAHLFVPSEAIGFIRTDDSVLIRYQAYPYQKFGQYAAKVVSIARSA 350

Query: 373 IISQQDNNLQTQE-----YYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQE 425
           + + + +N          +Y V + + +   +    + +L+ G         +   L + 
Sbjct: 351 LSAAELSNSGAPPEIMGSFYRVTVALKEQDVTAYGASQKLQAGMSLHADVFRERRRLYEW 410

Query: 426 IIHPI 430
           ++ P+
Sbjct: 411 VLEPL 415


>gi|291571473|dbj|BAI93745.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 552

 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 51/410 (12%), Positives = 122/410 (29%), Gaps = 52/410 (12%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + V +SG +      V +     G + +  VE G ++  G  +   E  E        
Sbjct: 77  LTVIVRASGVVQPV-RRVNLSPKTQGRLAQLYVEQGDRVEAGQIIARMESNELEAQRLQA 135

Query: 100 KVSIKNLRCHIDTEKSA----------LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +  ++  + ++   +                     + E    +R+E++     +     
Sbjct: 136 QARLERAQANLAKLRQGSRPEAIASARARLERTLARLAELQAGTRQEEIAVASARLREAE 195

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS-------HQKDLTMM 202
            ++F+    S+   +    +R+++        + +      L S                
Sbjct: 196 IRLFDARSGSLQNEIDQAQSRIQANLAELELAQGRVQRYEELKSQGAVSEDTLDGYRRDQ 255

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-----ELYDEANLEFAN 257
           + L      ++  L Q +         L   + +++  LR +      E+  +A  +   
Sbjct: 256 RRLEALQDEAKQRLAQLQENRRSQIERLEATVEQERQNLRQLQNGTRPEVIRQAESDVTE 315

Query: 258 YLKEIS--------RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
              ++          D+   +    +  S+L   +   E   I +P AG I    +    
Sbjct: 316 ARSQLDELENGTRPEDIAAAEADVREAESQLRYYQVLLEDTNIRAPFAGIITQRYAI-EG 374

Query: 310 NYAQQSQ--------PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
            +   +             IV  +K   + AK+    I  ++      +    Y D    
Sbjct: 375 AFVTPATSASDATSATSTSIVALAKDLEVLAKIPETDIVQIEPLQRVEIIADAYPDQ--- 431

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
            F+  +  I P   ++ +         V L    +        L++G   
Sbjct: 432 VFEGQVHLIAPEAIKERD---------VTLFQARIDIRTGQDVLQSGMNV 472


>gi|225850357|ref|YP_002730591.1| multidrug-efflux transporter, MFS family [Persephonella marina
           EX-H1]
 gi|225646380|gb|ACO04566.1| multidrug-efflux transporter, MFS family [Persephonella marina
           EX-H1]
          Length = 375

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 50/361 (13%), Positives = 124/361 (34%), Gaps = 49/361 (13%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I K   + G  + +G  L   +  +    ++     IK+L       +  L  +++ 
Sbjct: 53  SGKIIKMHKDEGDDVKKGDILAEIDPSDYKVQLERIVSEIKSLYYRKKALEEKLKRIDD- 111

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                               + + L++    ++ +      L  
Sbjct: 112 -----------------------------------QLNKKLEISKLSLKQVEEGIKGLSL 136

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH--EQKNML 241
           +   +   +   ++D+   +NL +K+      L + E  +    +E    +   EQ  + 
Sbjct: 137 RLKQIDLRIGQLKRDINRFRNLVKKDLAPARKLEKMETELKILKVERESVVSKLEQMKIS 196

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R I E   +        ++E+ +++   +        +   ++   ++  +L+P  G I 
Sbjct: 197 RDITEKKVKQAESDILKVRELKKEISSIEEKMNALKKQKEDIQNLIKETKLLAPFDGKIA 256

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +  +         P+  +V   K  YI   +   +++ ++KG  A ++   Y D    
Sbjct: 257 K-KYKTEGEVVSPGIPVYALV-SDKDIYINVLLEETKLKGIRKGSKAYIKIDAYPDEVY- 313

Query: 362 KFKAIIEKIDPIISQQ----DNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLF 415
             + ++E+I+P  + +      ++   E+ +V   + +       +   LR G   EV  
Sbjct: 314 --EGVVEEINPASAAKFALVPRDVTAGEFTKVAQRIPVKIRIVKGDKTLLRVGMSGEVEI 371

Query: 416 T 416
            
Sbjct: 372 K 372


>gi|91779365|ref|YP_554573.1| hypothetical protein Bxe_B0731 [Burkholderia xenovorans LB400]
 gi|91692025|gb|ABE35223.1| hypothetical protein Bxe_B0731 [Burkholderia xenovorans LB400]
          Length = 401

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 65/426 (15%), Positives = 147/426 (34%), Gaps = 73/426 (17%)

Query: 34  WSILLPIEISVSSSG-----EILNEDNVV-EIKSPF-------SGIIKKFQVENGSQILQ 80
           W       I V + G     E+  + +V  EI SP        SG++    V    ++  
Sbjct: 16  WIAYATSAIVVVAIGFGFLHEVELKQDVQCEIVSPSEVKVRGLSGLVTSVYVRPSERVAS 75

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G PL T          DL   S    R   D++                    R+EQ+  
Sbjct: 76  GAPLFTL-------QRDLSLSSDGRQRTQFDSQ-------------------MRDEQIRV 109

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
              +Y            + +       L    S     + L+ + +  R L    Q+ L 
Sbjct: 110 ADAQY--------AQRKAQLTAQRDASLLTGSSRKAELVALDEQINQNRQLSGESQQKLV 161

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            ++++ +   V+ + + Q     ++  + + + +  ++ +   I  L        +  L 
Sbjct: 162 RLRSVSD--YVTADRIEQASADEHQVKVAIAQGVARREQLRGEIATL--------SGALL 211

Query: 261 EISRDLEQNQRTFADEMSKLTIL-EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++   L++N       + ++ +  E++R+  TI +P  G + +++  +  +  + S   +
Sbjct: 212 DLDAQLKENDARHEQSVQEIQMRFEQSRQDATISAPHEGVVTFSRLVA-GHTLEASDIAL 270

Query: 320 KIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            I            ++  ++   V+KG T  ++F  +   +   ++A I+ I     Q  
Sbjct: 271 VIATDDKGALRAALRIPSRRRGFVEKGQTVRLKFDAFPYAKFGSYEARIDSISDTTMQSS 330

Query: 379 NNLQTQE------------YYE-VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            +L                Y     L+     +   + ++  G  A      +  T+A+ 
Sbjct: 331 PSLPGMPGALAAQAGGDGDYLAWATLRGKTFDYGQQHFDILPGMRATASIVIERRTIAEW 390

Query: 426 IIHPIT 431
           ++ P+ 
Sbjct: 391 VLAPLF 396


>gi|108807606|ref|YP_651522.1| RTX toxin ABC transporter [Yersinia pestis Antiqua]
 gi|108811882|ref|YP_647649.1| toxin ABC transporter [Yersinia pestis Nepal516]
 gi|145598180|ref|YP_001162256.1| toxin ABC transporter [Yersinia pestis Pestoides F]
 gi|108775530|gb|ABG18049.1| ABC associated RTX toxin transporter, HlyD/MFP family [Yersinia
           pestis Nepal516]
 gi|108779519|gb|ABG13577.1| putative ABC associated RTX toxin transporter, HlyD/MFP family
           [Yersinia pestis Antiqua]
 gi|145209876|gb|ABP39283.1| ABC associated RTX toxin transporter, HlyD/MFP family [Yersinia
           pestis Pestoides F]
          Length = 130

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 1/126 (0%)

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              +QPLM +VP      +   +  K +  V  G    V+   +   R       ++ + 
Sbjct: 2   VTTAQPLMVLVPEDYQLELDVMILNKDVGFVLPGQAVEVKVDSFPYTRFGTLSGEVKHVS 61

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               +            + L    L      + L  G             +   ++ P+ 
Sbjct: 62  RDAMEDQQRGLVFP-ARIRLLSDTLMVEGKPVRLSAGMAINAEIKTGRRRVIDYLLSPLQ 120

Query: 432 DNWPKI 437
               + 
Sbjct: 121 QYQSEA 126


>gi|220907173|ref|YP_002482484.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7425]
 gi|219863784|gb|ACL44123.1| secretion protein HlyD family protein [Cyanothece sp. PCC 7425]
          Length = 486

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 59/378 (15%), Positives = 126/378 (33%), Gaps = 37/378 (9%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L  + +L ++G+     WSI   I  +VS  G ++    +VEI+SP +G +++ +VE G
Sbjct: 38  PLLTLAILVLVGV----GWSIWGQIPTTVSGRGVVIRPRRIVEIQSPIAGQLEELKVEVG 93

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G          T     +  V+  +L+  +  ++  L  L N+     +     E
Sbjct: 94  DCVAKG-------PEVTPSPSVIALVNPTDLKQQLQLQREKLQQLQNQ----NRTAAELE 142

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR-SIYLNRLDLENKSSLLRALLSS 194
            + L           +     +  V         + R ++   +L +E +     A +  
Sbjct: 143 LERLQLEKSSREQQRRTLQQRLQQVETLNPRLREQNRVALQQQKLSVEQRLKDAEATVPV 202

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQE---RIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            Q+ L   ++L++  A+ Q+   Q E   R   +   EL+  + +       + + Y EA
Sbjct: 203 LQQRLERRRSLYQAGALDQDTFLQAEQEYRQSLQVVAELKAQLKQLDVEATRVQQEYLEA 262

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR---------------EQKTILSPI 296
               +    ++     Q +    + ++  T  +                      I SP 
Sbjct: 263 YTALSQLETQLRDLAAQEKSLQQEVLTAATARKDQLLEVQQQIQRLEQQIVRNSMIRSPY 322

Query: 297 AGTIVYNQSFSSSNYAQQSQPL--MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
            G I+                L  +++   S      +     + + +K G    V    
Sbjct: 323 PGCILELAVV-PGQILSPGMRLGTLQVNTASDTLKAISYFPVSEGKRIKPGMIIQVTPST 381

Query: 355 YADIREKKFKAIIEKIDP 372
               R       +  +  
Sbjct: 382 VKRERFGGILGKVTAVSS 399


>gi|163795095|ref|ZP_02189063.1| transporter, membrane fusion protein (MFP) family [alpha
           proteobacterium BAL199]
 gi|159179493|gb|EDP64022.1| transporter, membrane fusion protein (MFP) family [alpha
           proteobacterium BAL199]
          Length = 394

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 115/356 (32%), Gaps = 58/356 (16%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G      V +G  + +G  L+ F+D E    ++        L   I   ++ +  +  + 
Sbjct: 82  GRATDRPVTDGQAVTKGQVLVRFDDREALLRLEETDAQQATLLAEISRLEAEIVMIRERT 141

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +                                           +R+        ++   
Sbjct: 142 E-------------------------------------------SRVARAKSQLTEMTAG 158

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             L    LS  + D    + L    A+S + L +      K+  EL     E       I
Sbjct: 159 HELYEHELSFAKADYERARALSTTGAISSSRLERSHTDYLKARQELSRAQAEIAMAQAGI 218

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E    A+L   +  +     LE      A    +L I     E +TI+SPI G +V   
Sbjct: 219 DEAN--ADLAEVSVKRAERTRLEAELAEIAARRERLRI---DLEHRTIVSPIDG-VVGRT 272

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             S+    ++ Q LM +  +    ++ A +   ++  V  G T ++    Y       F+
Sbjct: 273 FVSAGERVEKGQRLMSLH-NPAEIWVEANIRETEVGRVAIGQTVSIHVDAYPGET---FE 328

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLF 415
             +E++    + Q        ++  + +V  +I   +A    +  LR G   EV  
Sbjct: 329 GRVERVGHAANSQYALLPRLNESGTFTKVTQRIEVRVAVEQRDGRLRPGMMVEVSI 384


>gi|254555524|ref|YP_003061941.1| bacteriocin ABC transporter, accessory factor PlnH [Lactobacillus
           plantarum JDM1]
 gi|254044451|gb|ACT61244.1| bacteriocin ABC transporter, accessory factor PlnH [Lactobacillus
           plantarum JDM1]
          Length = 458

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 61/435 (14%), Positives = 153/435 (35%), Gaps = 35/435 (8%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            + +   + +IG I +S++   EI ++ +G +     V  I++  +  IKK  +  G+++
Sbjct: 22  LLIIPVTLLLIGTILFSLVAKREIVINGTGTVQPTGTVPVIQATVNSAIKKNYLVEGARV 81

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  LL + ++   + +    VS + L+  +       D +N   DV     E    +L
Sbjct: 82  KKGQKLLVYTNVFNRNKLREDNVSKRQLQRQVTALDHFKDGINTDSDVFPTTDEFGYREL 141

Query: 139 LDF---LGKYHSTCSKVFNYGISSVY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           L       + + T +++     S+   +   +  T  + +   +  L+   +L  A+ + 
Sbjct: 142 LQSYLKQRQIYLTENQMLAAKSSAASTKKATLTKTAQQVVSNTKTSLDAYQALYNAVANG 201

Query: 195 HQKDLTMMKNLFEKNAVSQND----LNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            +   +          V+++      N ++ +   +  ++++ I   ++ L       +E
Sbjct: 202 SKYANSAKYGSVFNEYVAKSREANNANDKKEVKSATLADIQQQIDTLQDSLSSAKVQLEE 261

Query: 251 AN-----------------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                              +   + L E++    + ++      + +  L    +  TI 
Sbjct: 262 LQDFDDTKYSVETNNTKLAMLKNDQLSEVAEKRMKAEQDLRTVKADIDSLTTQSKSYTIK 321

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +  AG +    ++  + Y      + KI+P     +   ++  ++   I  VK       
Sbjct: 322 ATKAGVLHVADNYRGAKYVSSGAEIAKILPIIKQQRRVNVKLYISTADISSVKVKQAIRF 381

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           +       +      ++ KI     ++        +YEV   +     +D    LR G  
Sbjct: 382 KVTR-NVPKPIILDGVVTKIGVSPVEESKAT----FYEVTAAVP--ITADQAQLLRYGMI 434

Query: 411 AEVLFTAKNTTLAQE 425
            +        T    
Sbjct: 435 GQTAIITGKVTWFDY 449


>gi|332706731|ref|ZP_08426792.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
 gi|332354615|gb|EGJ34094.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
          Length = 420

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 52/371 (14%), Positives = 120/371 (32%), Gaps = 43/371 (11%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G ++ +   ++  +D E    +      + + +      +  ++ + ++
Sbjct: 73  GGRVNFVAVQEGKEVNKDQNIVRLDDQEIQAQLKGATARLVSAQQQELQARLQINLVESQ 132

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              +E          L+       T  +V          S+   + ++   +    + ++
Sbjct: 133 ILEVE----------LNLKKSQEDTRGQVLQA-----EASVAANVAQLNEAFAKLEEAQS 177

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNM 240
           + +L +A      +       L E+ AVS+   +Q +    K+       + +++    +
Sbjct: 178 ELNLAKANRDRFAQ-------LVEQGAVSKQQFDQAQTTFEKAQATVKATQASVNAIGKL 230

Query: 241 LRHINELYDEANLEFAN------YLKEISRDLEQNQRTFADEMSKLTIL-------EKTR 287
           +        +A     N       L  +   L Q +   A   +++ I        +   
Sbjct: 231 VNVAEGQLVQAQTSTLNPDMINAQLSRLQTQLAQARLQLAMVQAEVEIAKAFQQEIKSKI 290

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               I SPI G ++  +           Q L+ ++      Y+R  V    I  ++ G  
Sbjct: 291 SDLEIASPIDGVVIT-RLVEPGEIVSAGQTLLTVI-DPNNVYLRGYVPQGDIGKIRVGQK 348

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           A V      D   K   A +  ID   S    N+  +E     +    L   +     + 
Sbjct: 349 AKVFLDSDPD---KPLSATVTTIDSQASFTPENIYFREDRIRQVFGIKLTIDNPGGFAKP 405

Query: 408 GFPAEVLFTAK 418
           G PA+     +
Sbjct: 406 GMPADAEIITE 416


>gi|225676969|gb|ACO06053.1| accessory factor for ABC-transporter [Lactobacillus plantarum]
          Length = 458

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 62/435 (14%), Positives = 156/435 (35%), Gaps = 35/435 (8%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            + +   + +IG I +S++   EI ++ +G +     V  I++  +  IKK  +  G+++
Sbjct: 22  LLIIPVTLLLIGTILFSLVAKREIVINGTGTVQPTGTVPVIQATVNSAIKKNYLVEGARV 81

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  LL + ++   + +    VS + L+  +       D +N   DV     E    +L
Sbjct: 82  KKGQNLLVYTNVFNRNKLREDNVSKRQLQRQVTALDHFKDGINTDSDVFPTTDEFGYREL 141

Query: 139 LDF---LGKYHSTCSKVFNYGISSVY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           L+      + + T +++     S+   +   +  T  + +   + +L+   +L  A+ + 
Sbjct: 142 LESYLKQRQIYLTENQMLAAKSSAASTKKATLTKTAQQVVSNTKTNLDAYQALYNAVANG 201

Query: 195 HQKDLTMMKNLFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            +   +          V++    N+ N ++ +   +  ++++ I   ++ L       +E
Sbjct: 202 SKYANSAKYGSVFNEYVAKSKEANNANDKKEVKSATLADIQQQIDTLQDSLSSAKVQLEE 261

Query: 251 AN-----------------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                              +   + L E++    + ++      + +  L    +  TI 
Sbjct: 262 LQDFDDTKYSVETNNTKLAMLKNDQLSEVAEKRMKAEQDLRTVKADIDSLTTQSKSYTIK 321

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +  AG +    ++  + Y      + KI+P     +   ++  ++   I  VK       
Sbjct: 322 ATKAGVLHVADNYRGAKYVSSGAEIAKILPIIKQQRRVNVKLYISTADISSVKVKQAIRF 381

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           +       +      ++ KI     ++        +YEV   +     +D    LR G  
Sbjct: 382 KVTR-NVPKPIILDGVVTKIGVSPVEESKAT----FYEVTAAVP--ITADQAQLLRYGMI 434

Query: 411 AEVLFTAKNTTLAQE 425
            +        T    
Sbjct: 435 GQTAIITGKVTWFDY 449


>gi|220905773|ref|YP_002481084.1| DevB family ABC exporter membrane fusion protein [Cyanothece sp.
           PCC 7425]
 gi|219862384|gb|ACL42723.1| ABC exporter membrane fusion protein, DevB family [Cyanothece sp.
           PCC 7425]
          Length = 398

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 62/386 (16%), Positives = 125/386 (32%), Gaps = 56/386 (14%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFS---GIIKKFQVENGSQILQGTPLLTFEDIETT-D 94
           P++  +++ G +  E  V+ +  P       I +  V  G  +  G  L   E  E    
Sbjct: 54  PVKREITALGRLEPEGEVLNVSGPNGPNGERIGQLLVREGQFVKTGQTLAYLESYEERLA 113

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             DL    +   +  +  E S                            +     S+V  
Sbjct: 114 ERDLAANQLAEAQARLKAETSY------------------------GRAQIQEARSRVAM 149

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                    L  + T  R               ++A L + Q+DL     L  + AVSQ 
Sbjct: 150 VTNPKSAAILAQQATIER---------------IQAELINAQRDLRRFAQLQAEGAVSQQ 194

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L+ +   V     EL         + +      D AN + ++   E++R   Q Q   A
Sbjct: 195 ALDDRNLAVKSKQQELSNAQSTLAQLQQEKVTDLDNANAQLSSAQAELAR--SQTQVQIA 252

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              S L + +   ++  I +P +G I+   + S  +   +   ++++  +++   + A+V
Sbjct: 253 SAASNLKLAQARLDRTMITAPQSGQILKIHTHSGESIGDKG--ILEMG-NTRQMSVVAEV 309

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEYYEVILK 392
               I  +K G  AT+    +          +  +I    +++            EV ++
Sbjct: 310 YETDIAKIKVGQPATITSSAFNGSIPGTVTQVGLRIGKNDVLNTDPAANTDARVVEVRIR 369

Query: 393 ITDLAFSDN------NIELRNGFPAE 412
           + D            ++ +     A 
Sbjct: 370 LKDSQKVAGLTNLQVDVAIAPQMAAT 395


>gi|329964284|ref|ZP_08301385.1| conserved domain protein [Bacteroides fluxus YIT 12057]
 gi|328525589|gb|EGF52632.1| conserved domain protein [Bacteroides fluxus YIT 12057]
          Length = 442

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 60/440 (13%), Positives = 138/440 (31%), Gaps = 36/440 (8%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +    P +L R  +     ++               +S+   I  E   V I +  SG
Sbjct: 27  QEILTRPPHALVRWGITVFFTVLALFFIGGCFFKYPDVISAPITITTEHPPVWIVARGSG 86

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            IK+   ++   +  G+ +   E+   T+ + L K  +         + S ++   ++  
Sbjct: 87  KIKEVFHKDRDSVWTGSIIAVLENPAETEDVLLLKQDLA---AFSMADSSIMNARISEMR 143

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            L     +    L   +   +     ++   + +  + L+     +R        L  +S
Sbjct: 144 TLGSIQNTYASFLKSLIDYRNFLSLDLYEQKMEATRKELQEYRNYIRH-------LNKQS 196

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNMLR 242
            L +  L          K LF+K   +Q++  + ++          +L  ++   +    
Sbjct: 197 DLDKEQLGIAATVHNREKLLFDKGLTAQSEYEEAKQAFLNKQQGREQLMTSLSSARIQEA 256

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + +   E  +E A     +   L            K+++         + SP +G + Y
Sbjct: 257 QLQQNIIEIQMERAREANSLGIALNAAYNEL-----KVSVNNWELTYLFV-SPASGILSY 310

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
           N  +  +        +  +V       I + K+       V  G    +    Y  +   
Sbjct: 311 NHIWQKNQNVSNGDKVFSVVAEETGDIIGKIKLPVSGSGKVMPGQRVNISVTGYPYMEFG 370

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL-----RNGFPAEVLFT 416
                +  +  +   +         Y V +K+     +     L      +G  AEV+  
Sbjct: 371 FLTGEVVSVSLLADDESA-------YTVTVKLPQDLRTSYGKTLEFKGELSG-TAEVM-- 420

Query: 417 AKNTTLAQEIIHPITDNWPK 436
               ++   +I P+   W K
Sbjct: 421 TDERSVTGRLISPLRYLWKK 440


>gi|227955431|gb|ACP43451.1| McnA [Escherichia coli]
          Length = 425

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 53/411 (12%), Positives = 122/411 (29%), Gaps = 66/411 (16%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             GEI      V + S   G++ K  V  G +I +G P+   +  ++T    +     ++
Sbjct: 55  VEGEITTWPRPVNVYSGVQGVVIKQFVTEGQRIKKGDPIYLIDVSKSTSSGVVGDNKRRD 114

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           +   +      +  L        +  E +  Q      +      +              
Sbjct: 115 IEKQLSRIGDIISRLEENKKTTLQTLEKQRIQYYSAFERSTEILRRA------------- 161

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                                     +   + ++   K    K  ++++ L  Q  + Y+
Sbjct: 162 -----------------------EEGVKIMKSNMDNYKQYQTKGLINKDQLTNQIALYYQ 198

Query: 226 STLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISRDLEQNQRTFADEMSKLTI 282
               +     + +  L  +  L  +      EF N + ++     + Q+   D       
Sbjct: 199 QQNNILSLSTQNEQNLLQVTSLESQMQTLAAEFDNRIYQVELQRYELQKELVD------- 251

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQI 339
                    I +   G I      +          L++I+P    +    +   V    I
Sbjct: 252 -TDAGRDIIIRALSDGKIDSLSV-TPGQMVSVGDSLLQIIPEEIKNYHLIV--WVPNNAI 307

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI-----------ISQQDNNLQTQEYYE 388
            ++  G    VR+  +   +  +F A I  I               + ++N   +  YY+
Sbjct: 308 PYISVGDNVNVRYEAFPPEKFGQFTAKIMLISRTPASAQEMQTYPGAPRNNTGVSVPYYK 367

Query: 389 VILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           ++L      + + +  + L NG  A+     +   + Q ++ P  +     
Sbjct: 368 IVLNPEQQTIEYGEKKMPLENGMKAQSTLFLEKRKIYQWMLSPFYNMKYSA 418


>gi|75908801|ref|YP_323097.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75702526|gb|ABA22202.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 400

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 140/385 (36%), Gaps = 48/385 (12%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFS--GI-IKKFQVENGSQILQGTPLLTFED-IETT 93
            P+ ++V++ G +  +  +  + +P S  GI + +  V+ G ++  G  L   ED    T
Sbjct: 57  APVRVAVTALGRLQPQGQITTLSAPSSTNGIRVDRLLVKEGDEVQAGQVLAYLEDYSRAT 116

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             ++     ++  +  +   K+                                      
Sbjct: 117 SALEQALDKLQIAKIRLAQVKAGAK----------------------------------- 141

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              I +   ++    ++++     +   +   + + A L++ Q +    + LF++ AVS 
Sbjct: 142 PGDIDAQKATVARLESQLKGEVATQ---QATINRINAELNNAQTENDRYQKLFKEGAVSA 198

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  + +   +     +L E           + +   EA  + ++  +  + D++  Q   
Sbjct: 199 SVSDSKALQLKTVEQQLTEAKASLSRSQNTLADQIKEAKAKLSSVKEVRAVDVDLAQMEV 258

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
              ++ +   +  +E   I +PI G I   ++ + +     S     I   S++  I A+
Sbjct: 259 RSAVTAVKQAKADQELTYIKAPIDGRI--LKTHAKTGEVIPSSGFADIGKTSQMYVI-AE 315

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQDNNLQTQEYYEVIL 391
           V    IQ V+ G  AT+    ++   +   K I  ++D   I S    +   +   EV +
Sbjct: 316 VYQTDIQKVRVGQKATITSTAFSGKLQGTVKEIGWQVDKQSIFSLNPRSDTDRRIIEVKV 375

Query: 392 KITDLAFSDNNIELRNGFPAEVLFT 416
            I + A S+    L N    +V   
Sbjct: 376 SIDNPADSEKVARLTN-LQVDVSIQ 399


>gi|84569633|gb|ABC59161.1| accessory factor PlnH [Lactobacillus plantarum]
          Length = 458

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 61/435 (14%), Positives = 156/435 (35%), Gaps = 35/435 (8%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            + +   + +IG I +S++   EI ++ +G +     V  I++  +  IKK  +  G+++
Sbjct: 22  LLIIPVTLLLIGTILFSLVAKREIVINGTGTVQPTGTVPVIQATVNSAIKKNYLVEGARV 81

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  LL + ++   + +    VS + L+  +       D ++   DV     E    +L
Sbjct: 82  KKGQKLLVYTNVFNRNKLREDNVSKRQLQRQVTALDHFKDGIDTDSDVFPTTDEFGYREL 141

Query: 139 LDF---LGKYHSTCSKVFNYGISSVY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           L+      + + T +++     S+   +   +  T  + +   + +L+   +L  A+ + 
Sbjct: 142 LESYLKQRQIYLTENQMLAAKSSAASTKKATLTKTAQQVVSNTKTNLDAYQALYNAVANG 201

Query: 195 HQKDLTMMKNLFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            +   +          V++    N+ N ++ +   +  ++++ I   ++ L       +E
Sbjct: 202 SKYANSAKYGSVFNEYVAKSKEANNANDKKEVKSATLADIQQQIDTLQDSLSSAKVQLEE 261

Query: 251 AN-----------------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                              +   + L E++    + ++      + +  L    +  TI 
Sbjct: 262 LQDFDDTKYSVETNNTKLAMLKNDQLSEVAEKRMKAEQDLRTVKADIDSLTTQSKSYTIK 321

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +  AG +    ++  + Y      + KI+P     +   ++  ++   I  VK       
Sbjct: 322 ATKAGVLHVADNYRGAKYVSSGAEIAKILPIIKQQRRVNVKLYISTADISSVKVKQAIRF 381

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           +       +      ++ KI     ++        +YEV   +     +D    LR G  
Sbjct: 382 KVTR-NVPKPIILDGVVTKIGVSPVEESKAT----FYEVTAAVP--ITADQAQLLRYGMI 434

Query: 411 AEVLFTAKNTTLAQE 425
            +        T    
Sbjct: 435 GQTTIITGKVTWFDY 449


>gi|323698586|ref|ZP_08110498.1| secretion protein HlyD family protein [Desulfovibrio sp. ND132]
 gi|323458518|gb|EGB14383.1| secretion protein HlyD family protein [Desulfovibrio desulfuricans
           ND132]
          Length = 411

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/356 (13%), Positives = 102/356 (28%), Gaps = 56/356 (15%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V +   + +G  L+  +           +V++   R  + +  +A +    + 
Sbjct: 74  GHVAEVPVHDNQWVEKGDLLVRVDP-------RTFEVALDIARARLQSANAAREEAEAEV 126

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                  + R   L     +     + V  Y                             
Sbjct: 127 AAARSLVDQRNAALSSNRSELAQARAGVEEYA---------------------------- 158

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                A     Q D   M  + E  AVS+ + +        S  +L             I
Sbjct: 159 -----AGHDRDQNDFKRMDEMVEAGAVSRQEYDHARAQAAVSRAKLLSARKRIDTQSAQI 213

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +    A     + L++    + + Q    +  +++   E       I +P AG +   +
Sbjct: 214 RQAVASAQA-AGDGLRQAQAAVVKRQAEAREAEAEVRQAELDLSYTRITAPCAGFVTK-K 271

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           S     Y Q  Q L+ +V   +  ++ A     QI  ++ G    +    Y       F+
Sbjct: 272 SVEPGAYVQVGQKLLSVV--GRDVWVVANFKETQIAGMRPGQPVDIEVDAYPGRT---FE 326

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-----DLAFSDNNIELRNGFPA 411
             ++ I      +         T  + +V+ ++      D    +    L  G   
Sbjct: 327 GHVDSIQRGTGSRFTLLPPENATGNFIKVVQRVPVKIVLDHPNGEGGCLLAPGMSV 382


>gi|28377327|ref|NP_784219.1| bacteriocin ABC transporter, accessory factor PlnH [Lactobacillus
           plantarum WCFS1]
 gi|300767068|ref|ZP_07076981.1| bacteriocin ABC superfamily ATP binding cassette transporter
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|308179542|ref|YP_003923670.1| bacteriocin ABC transporter, accessory factor PlnH [Lactobacillus
           plantarum subsp. plantarum ST-III]
 gi|1495677|emb|CAA64190.1| accessory factor for ABC-transporter PlnH [Lactobacillus plantarum]
 gi|28270159|emb|CAD63058.1| bacteriocin ABC transporter, accessory factor PlnH [Lactobacillus
           plantarum WCFS1]
 gi|86771447|gb|ABD15229.1| bacteriocin ABC transporter [Lactobacillus plantarum]
 gi|300495606|gb|EFK30761.1| bacteriocin ABC superfamily ATP binding cassette transporter
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|308045033|gb|ADN97576.1| bacteriocin ABC transporter, accessory factor PlnH [Lactobacillus
           plantarum subsp. plantarum ST-III]
          Length = 458

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 62/435 (14%), Positives = 155/435 (35%), Gaps = 35/435 (8%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            + +   + +IG I +S++   EI ++ +G +     V  I++  +  IKK  +  G+++
Sbjct: 22  LLIIPVTLLLIGTILFSLVAKREIVINGTGTVQPTGTVPVIQATVNSAIKKNYLVEGARV 81

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  LL + ++   + +    VS + L+  +       D +N   DV     E    +L
Sbjct: 82  KKGQKLLVYTNVFNRNKLREDNVSKRQLQRQVTALDHFKDGINTDSDVFPTTDEFGYREL 141

Query: 139 LDF---LGKYHSTCSKVFNYGISSVY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           L       + + T +++     S+   +   +  T  + +   + +L+   +L  A+ + 
Sbjct: 142 LQSYLKQRQIYLTENQMLAAKSSAASTKKATLTKTAQQVVSNTKTNLDAYQALYNAVANG 201

Query: 195 HQKDLTMMKNLFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            +   +          V++    N+ N ++ +   +  ++++ I   ++ L       +E
Sbjct: 202 SKYANSAKYGSVFNEYVAKSKEANNANDKKEVKSATLADIQQQIDTLQDSLSSAKVQLEE 261

Query: 251 AN-----------------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                              +   + L E++    + ++      + +  L    +  TI 
Sbjct: 262 LQDFDDTKYSVETNNTKLAMLKNDQLSEVAEKRMKAEQDLRTVKADIDSLTTQSKSYTIK 321

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +  AG +    ++  + Y      + KI+P     +   ++  ++   I  VK       
Sbjct: 322 ATKAGVLHVADNYRGAKYVSSGAEIAKILPIIKQQRRVNVKLYISTADISSVKVKQAIRF 381

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           +       +      ++ KI     ++        +YEV   +     +D    LR G  
Sbjct: 382 KVTR-NVPKPIILDGVVTKIGVSPVEESKAT----FYEVTAAVP--ITADQAQLLRYGMI 434

Query: 411 AEVLFTAKNTTLAQE 425
            +        T    
Sbjct: 435 GQTAIITGKVTWFDY 449


>gi|26988702|ref|NP_744127.1| secretion protein HlyD family protein [Pseudomonas putida KT2440]
 gi|24983490|gb|AAN67591.1|AE016388_11 HlyD family secretion protein [Pseudomonas putida KT2440]
          Length = 387

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 112/323 (34%), Gaps = 30/323 (9%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I    S L        V +    S+ + L+           +     +++       
Sbjct: 79  QGEITRISSQLGARIETVPVEDNQHVSKGDLLVRLEAADFELAVERARAALATREAEYAQ 138

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             +R+          + + +  +A     + DL+  + L +   VS+  +       + +
Sbjct: 139 AQSRLTQQGSLIAAGQAQLAATQATFDRSRLDLSRAEKLRKPGFVSEERVTTLSADSHVA 198

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             ++ +   + ++  + +  L               + +L++     A+  + L   E  
Sbjct: 199 GSQVDKARADLQSQRQQVTAL---------------NAELKRLDAQIANARTDLAQAELN 243

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I +PI+GTI   ++  +    Q    L+ IVP     +++A     QI  +  G 
Sbjct: 244 LTRCEIHAPISGTI-GQRNARNGQVVQAGAYLLSIVPDED-IWVQANFKETQIGRMHPGQ 301

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAF 398
            A + F  Y D      +  ++ +      Q      +  T  + +V+    +K+T  A 
Sbjct: 302 RAELLFDSYPDT---PIEGRVDSLFAASGAQFSLLPPDNATGNFTKVVQRIPIKLTFHAD 358

Query: 399 SDNNIELRNGF--PAEVLFTAKN 419
           +  +  +R G    A V   +++
Sbjct: 359 NPLHGRIRPGMSVTATVDLRSED 381


>gi|325289756|ref|YP_004265937.1| efflux transporter, RND family, MFP subunit [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965157|gb|ADY55936.1| efflux transporter, RND family, MFP subunit [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 535

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 55/376 (14%), Positives = 117/376 (31%), Gaps = 46/376 (12%)

Query: 46  SSGEILNEDNVVE--IKSPFSGI-IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           ++G +   + V     +S    + I +  V+ G ++ QG  L   +D      +  K+++
Sbjct: 80  ATGTVNYPNAVKLGFEQSGSGSLQITELNVKQGDKVSQGQVLAKIDDTTLEQTLSQKELN 139

Query: 103 IKNLRC--HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS-TCSKVFNYGISS 159
           + + +       E S    L+     + K  E++E           +   ++VF      
Sbjct: 140 LASAQAKYQEALEGSNSTILSTLASAMTKLNEAQESLNTAKREADPAYLTNQVFLAKQKV 199

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
              S  +   +   +  N    +         L + Q                       
Sbjct: 200 EAASEALTKAQQSGVTTNVPSAQASLDEAEKALKTAQD---------------------- 237

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                    E  + +   +N         + A  +   Y    S  L     + A   + 
Sbjct: 238 -----AQNGEAGKVLESAENAYEAAKTNLEAAQAQAKRYSTSDSPTLLAAMASLAQAQAD 292

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L+  +      +I++P+ G IV     +       S  ++ +V  + +  I   V    I
Sbjct: 293 LSEAQDNYANASIVAPMDGVIVTVSVENY-ETVSSSDSIITMVAATDVFDIETTVDQSDI 351

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             ++ G  A V     AD    +  A + ++D     +         + V + I + +  
Sbjct: 352 TKIEVGQKAVVTLDTLADT---EISATVSQVDL----EGTITSGVTSFSVKVTIDEPSSV 404

Query: 400 DNNIELRNGFPAEVLF 415
                LR+G  A+V  
Sbjct: 405 -----LRSGMNADVSI 415


>gi|119492074|ref|ZP_01623527.1| putative HlyD family secretion protein [Lyngbya sp. PCC 8106]
 gi|119453284|gb|EAW34449.1| putative HlyD family secretion protein [Lyngbya sp. PCC 8106]
          Length = 518

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/390 (13%), Positives = 127/390 (32%), Gaps = 27/390 (6%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  ++  ++S G +        IKSP  G +++  V++G +I  G  L+   + +   ++
Sbjct: 56  LGNVDNKINSGGTVELGGQR-TIKSPEEGAVERLLVQSGDKISPGQELIILRNPQRETIL 114

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  ++ I+     I+  +  ++    K  + +  +E      L+   +   +   + +  
Sbjct: 115 NKSQLEIQKQELIIERNREKIEEAQEKLRIAQANYEDD----LEDYQQEVVSKRAIKDLE 170

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           I  +   +     ++          E K SL  A       +  + +    +  + +   
Sbjct: 171 IKKIKAQINRDRQKVE---------EAKYSLEAAEAELENLEKLLERGFVAQQEIDRQRQ 221

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLEQNQ 270
             +ER       EL     + +     + EL  + ++      E    L++   + +Q+Q
Sbjct: 222 TVRERQTGLRDAELDFKNSQIELETEQVKELEIQNSVSSSPVFEAEIELQQAQSEWKQSQ 281

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                   +      T E   + +PI G I+        +   +S  LM +    +   I
Sbjct: 282 SELERLKVEYQEAALTLENNIVTAPIDGVILNINV-KPGDGVNRSDELMSLGDPDQEL-I 339

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           + +++      V+    A +                I          +++   Q      
Sbjct: 340 QLQLSTLDAAKVQPNQLARISIIGPNSETFTGRVQSIGLQARSSGNNNDSESGQATVPAT 399

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +++     +     L  G    V    +  
Sbjct: 400 IQLDQPTRT-----LIPGSAVSVEIILEER 424


>gi|226314548|ref|YP_002774444.1| hypothetical protein BBR47_49630 [Brevibacillus brevis NBRC 100599]
 gi|226097498|dbj|BAH45940.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 396

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 57/370 (15%), Positives = 113/370 (30%), Gaps = 44/370 (11%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G++     E GS + +G  L   +       +   + ++      ++  ++        
Sbjct: 46  GGLVTNVTAEEGSTVKKGQVLAQIDKRSYQMTVAEAQAALDQATAKLEEARAGS------ 99

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                           D   +      +  N  I                        E+
Sbjct: 100 ---------------RDTTIQRSMANVQQANANIQLAQARKNQAQAGKARAAEQMTQAES 144

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +    +  L   QK L     LFEK A+S  DL+ Q+  V ++  +  +   +       
Sbjct: 145 QWQGAQQTLLYQQKRLEEATALFEKGAISAKDLDTQKEAVNQAKTQADQWAAQVAQTQAQ 204

Query: 244 INELYDEANLEFAN----------------YLKEISRD--LEQNQRTFADEMSKLTILEK 285
            +   ++     A                  +KE S D  +           +KL     
Sbjct: 205 YHSAQEDIAATVAQIGTAQAAQAAAQADLDQVKEGSTDYAIRALLAAQQQAKAKLDQALL 264

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             E+  I +   GT++   S      A+    L  ++  S    +   +   Q+  VKKG
Sbjct: 265 QLEKSKITATDDGTLLR-SSIEQGEVAKTGATLFTMM-KSDQLELVVYIPEAQLNRVKKG 322

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
               ++   Y +     F   I +I         N+QT +    ++    +  +D   ++
Sbjct: 323 QKVGIKVDAYPEET---FTGTISRISEKAEFTPKNVQTPDERTKLVFAVTIHITDGLDKI 379

Query: 406 RNGFPAEVLF 415
           + G PA+VL 
Sbjct: 380 KPGMPADVLL 389


>gi|116625058|ref|YP_827214.1| secretion protein HlyD family protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116228220|gb|ABJ86929.1| secretion protein HlyD family protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 391

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 52/403 (12%), Positives = 129/403 (32%), Gaps = 22/403 (5%)

Query: 18  KRMTLLSIIGIIGLITW----SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           +   LL+ + +IG  T+    +   P +  +  SG I  ++  V I    +G + +  V+
Sbjct: 4   RIPILLAALAVIGAATYWFRSAGKAP-DNRLVISGNIELDE--VNIAFKTAGRLTERAVD 60

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +G  +   +  + T   + +   +      +   ++A++          +  ++
Sbjct: 61  EGDGVKKGQVVARLDRDQLTAQREREAAGLAASESQLLQAQTAVELQRASLAAEIETRQA 120

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             + +   L +  +           +   +   +L R R  +     L     +  A   
Sbjct: 121 DLQSMEARLAELRNGARPQEKLDARAAVDAAASELERARKDWERAQTLHKNDDISTAQFD 180

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
            ++      + + ++          QER          E ++ Q+  +         A  
Sbjct: 181 QYRNRFENAQAMLKQ---------VQEREALVLAGPRVEQVNAQRGQVARAQGSVKMAEA 231

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                LK   +++   +   A   + L +++      T +SP+ G ++  ++        
Sbjct: 232 NALE-LKRREQEVATRRAEIARSKANLALIDSQLADTTAVSPVDGVVL-MKAVDVGEVVA 289

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               ++ +         R  V    +  VK G    V    Y           +  I   
Sbjct: 290 PGTTIVTVGDIDHPWL-RGYVNETDLGKVKIGSKVRVTTDTYPGKVY---NGRVSFIASQ 345

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                  +QTQ+    ++    +   +   EL++  PA+    
Sbjct: 346 AEFTPKQIQTQQERVKLVYRVKIEVENPGRELKSNMPADAEIV 388


>gi|296161968|ref|ZP_06844768.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
 gi|295887844|gb|EFG67662.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
          Length = 394

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 60/409 (14%), Positives = 121/409 (29%), Gaps = 64/409 (15%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L    +L +I +     W I    +   +       E  V ++    SG +K+ +V N  
Sbjct: 29  LAFGGVLVLIAV-CYGVWLIFFAGKTVTTDDAYTAVE--VADVTPLVSGPVKEVKVVNTQ 85

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G  L+  +D +        K+++      +   +  +  +      L   F+ RE 
Sbjct: 86  AVHAGDVLVVLDDTDA-------KIAVDQAEAELGRARRQVRQIMANDTALAGQFDLREA 138

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                                                        E   +  RA      
Sbjct: 139 ----------------------------------------QIASAERDVARARAAYDKAV 158

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            D    +NL +  AVS  D    +  + ++T  L +     K         +       A
Sbjct: 159 LDEKRRRNLVDGGAVSAQDFTNAQAALREATATLGQAEANLKAARAASVSAHGSQQANQA 218

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            +L        +         ++L       ++  I +P+ G +   ++     + Q   
Sbjct: 219 LFLDSTI----ETNPIVVAAKARLDKARVDLDRTIIRAPVDGIVSQ-RAVDIGQHVQAGT 273

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIE 368
            LM IVP  +  Y+ A     Q+++V+ G  AT+    Y D           +       
Sbjct: 274 RLMNIVPI-QQIYVDANFKENQLRNVRPGQKATLTSDLYGDDVEYDGWVEGFEGGSGSAL 332

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            + P  +   N ++  +   V + +       + + +     A V  T 
Sbjct: 333 SVIPAQNATGNWIKVVQRLPVRIHLNPEQLKKHPLRIGLSMEATVDVTT 381


>gi|78779566|ref|YP_397678.1| leukotoxin secretion protein-like [Prochlorococcus marinus str. MIT
           9312]
 gi|78713065|gb|ABB50242.1| leukotoxin secretion protein-like protein [Prochlorococcus marinus
           str. MIT 9312]
          Length = 317

 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 87/227 (38%), Gaps = 15/227 (6%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L+ ++  +     EL  +I  +K +L+ I+ L D   ++   YL++ ++ + +       
Sbjct: 92  LHAKKEGLEAKLGELESSIQSEKEILKEISILADAGGIQKLQYLQQKNK-VSELGYEKKQ 150

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV- 334
             +++  L   + +  ++SP+ G +    S S    A Q + L+KIVP        AK+ 
Sbjct: 151 VEAEIKELNFDKSKTLLVSPVKGKVFNLISVSKGFAANQGETLLKIVPSGDT---EAKIF 207

Query: 335 -TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
                I  VK    A +R   +   +    + I++ I      + N       +   + +
Sbjct: 208 LKNSDIGFVKSNMKAKIRVDAFPFTQFGSIEGILKSI-GDEVIRSNQQNQSSLFPAYVSL 266

Query: 394 TDLAFSDNNIE--LRNGFPAEV-LFTAKNTTLAQEIIHPITDNWPKI 437
                  N  +  +R+G    V L           II  +TD   K 
Sbjct: 267 EKQYLEKNGEKFFVRSGQSVSVNLIVRDKR-----IISLLTDAIDKA 308



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 2/115 (1%)

Query: 14  PASLK-RMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           PASL  R  + +I+G       ++    ++  V + GE+        I++P SGI+ +  
Sbjct: 12  PASLWIRGLIWAIVGSFSFGFIYACFARMDEVVIAKGELQALGAERPIRAPISGIVSEIF 71

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++ G  + + + LL F+        +  +  +  L   I +EK  L  ++   D 
Sbjct: 72  IKEGDSVEKDSKLLRFDSNVLHAKKEGLEAKLGELESSIQSEKEILKEISILADA 126


>gi|296123717|ref|YP_003631495.1| efflux transporter RND family, MFP subunit [Planctomyces
           limnophilus DSM 3776]
 gi|296016057|gb|ADG69296.1| efflux transporter, RND family, MFP subunit [Planctomyces
           limnophilus DSM 3776]
          Length = 598

 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 62/385 (16%), Positives = 126/385 (32%), Gaps = 58/385 (15%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G+ + +G  +   +     D    +K+S+      +   +  ++             
Sbjct: 55  VPEGTFVKEGDIVCELDASALVDRETTQKISLTQAEALLSQAQENVEI------------ 102

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                       +     S V    +      L ++            +L    +L R  
Sbjct: 103 ------------QKTQNESDVAAAELKLSLALLDLRKFEEGEFLQQVNELSGAVTLAREN 150

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK--------NMLRH 243
           LS  ++    +K + +K   SQNDL  +   V K+ ++L+    + K          L  
Sbjct: 151 LSRAEESQAFVKRMAQKGYRSQNDLEAERIAVTKAEIDLKVAEEKLKVLKDFTYVRTLEE 210

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFAD-------EMSKLTILEKTREQKTILSPI 296
           +     E   E     ++    L Q Q   +        E  K   + K  E  TI +P 
Sbjct: 211 LQANAKEFEREIQRVKRKSVAALSQKQAELSKCELTFKVEKDKYERIVKQIEACTIRAPQ 270

Query: 297 AGTIV----------YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            G +V                     ++ Q ++ + P      + A++   +I  +K G 
Sbjct: 271 DGQVVWANARDPRRSDAPVIEEGAVVRERQAIINL-PDYDAMKVNARIHESRISLIKTGL 329

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDNNIEL 405
              VR   YA    + F  +++ +  +     +  +   + YE  +++TD     N  +L
Sbjct: 330 PVRVRIDAYA---GEVFAGVVDTVSSVPLSNSSFSRGDVKEYEASVRLTDAVEKVN--KL 384

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPI 430
           R G  A +        L+  ++ P+
Sbjct: 385 RPGLSANIEIIVAE--LSDVLLAPV 407


>gi|258515976|ref|YP_003192198.1| secretion protein HlyD family protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257779681|gb|ACV63575.1| secretion protein HlyD family protein [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 368

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 54/373 (14%), Positives = 118/373 (31%), Gaps = 46/373 (12%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG I     +V ++S  SG I +  V+ G ++  G  +   ++                 
Sbjct: 37  SGTIEAT--LVPVQSELSGKIVEITVKEGQKVGTGDIVARLDE----------------- 77

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                               L+ A  S + QL     +            I     ++  
Sbjct: 78  ------------------QSLKIALASAQSQLKQAEQRLQDLLGGTRAEEIRRYQANVDQ 119

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
               +         LE   +     L   +K L   + L+++ A+S+ + + Q   +  +
Sbjct: 120 SQAGLEQTAAAEQQLEAIVARDLENLKYEEKFLKDEEALYKEGAISKKEYDAQVHKLKVA 179

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLEQNQRTFADEMSKLTI 282
             + + ++ + +           + N   A     +S      +   +         + +
Sbjct: 180 EQQYKTSLEQYEGTKAQYKSSQAQMNAARAALDLALSGYTQPTILAQKAVVEGAQQAVNL 239

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +    +  I S + GT++Y            +  ++ ++      ++R  V   Q+  +
Sbjct: 240 AKLNLTKAVIRSSVDGTVLYKHV-EPGEVVNPAGRILTVLEPED-IWVRIYVPEAQLNTI 297

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             G  A+V    Y       F   I  I         N+QT+E    I+    +   +  
Sbjct: 298 ALGKKASVSVDAYPGR---SFAGEISNISDRAEFTPKNVQTKEERTSIVFAVKVKLKEGF 354

Query: 403 IELRNGFPAEVLF 415
            +L +G PA+V+ 
Sbjct: 355 GKLNSGMPADVII 367


>gi|147676372|ref|YP_001210587.1| membrane-fusion protein [Pelotomaculum thermopropionicum SI]
 gi|146272469|dbj|BAF58218.1| membrane-fusion protein [Pelotomaculum thermopropionicum SI]
          Length = 468

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 117/390 (30%), Gaps = 106/390 (27%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSG-IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           ++S++G +     V    S  +  IIKK  V+ G  +  G  L               + 
Sbjct: 34  AISATGTVEPVSTVSL--SFENAEIIKKIYVKEGDHVTAGQLLA--------------EQ 77

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
              NL   +    ++L     K ++L+                                 
Sbjct: 78  ESDNLEAQVIQSSASLKGALAKLELLKNG------------------------------- 106

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                      S        E    + +A     + +L   + LF++ AVS+ DL+    
Sbjct: 107 -----------STAEEIAQAEANVVMAQAAYDLTKTNLERYQALFQEGAVSRADLDSASN 155

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               +  +L++     K +L               N  ++I     Q + +     ++L 
Sbjct: 156 EYVNAEAKLKQAQESLKALLNG-------------NRREDIEAQAAQVESS----RAQLQ 198

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM-----------KIVPHSKLTYI 330
           I +K      + SPI G +             + Q               IV  S    +
Sbjct: 199 IAQKALAGTKLFSPINGVVSEVN----GG---EGQRAAANNNSTSSGTGFIVVISDALQV 251

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           RA+V    I  ++ G  A +    + +   K F   +  I P  +   N         V 
Sbjct: 252 RAQVNEADIGRLETGQKAEITVNAFPN---KTFTGRVGSISPQATTVSN---------VQ 299

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +  T +   +N   L+ G PA V    +  
Sbjct: 300 VYDTVIELDENQQGLKAGMPANVNIIVERR 329


>gi|330860448|emb|CBX70755.1| hypothetical protein YEW_GB25110 [Yersinia enterocolitica W22703]
          Length = 106

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 38/106 (35%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     +  + +    +  +  L ++G+I +  W+    ++      G++        I+
Sbjct: 1   MSSLSLQQERAHQERRMSAIVWLMLVGMIVMFIWAYFAILDEVTVGIGKVTPSSRTQLIE 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           S   GII +  V  G+ I +G  L   +              ++ L
Sbjct: 61  SLDGGIINELLVHEGAIINKGQILARLDPTHFQSNYGEAAARVRTL 106


>gi|255035476|ref|YP_003086097.1| hypothetical protein Dfer_1691 [Dyadobacter fermentans DSM 18053]
 gi|254948232|gb|ACT92932.1| hypothetical protein Dfer_1691 [Dyadobacter fermentans DSM 18053]
          Length = 428

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/420 (13%), Positives = 140/420 (33%), Gaps = 25/420 (5%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
                   +++ I     W I  P    + ++  ++ ++    +     G +++  V +G
Sbjct: 29  RSGMSLFFAVLSIFFASCWMIKYP--DVIPATFTLVADNIPRSVIIRSDGKLQRILVRDG 86

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT-EKSALDFLNNKYDVLEKAFESR 134
             + Q   +   E   + D I+L + +I+ L  +I+  +   ++  +     +    +  
Sbjct: 87  QYVNQRQMVAFMESTASHDQINLLEKNIQLLATYIEQGQWENVNGFSTDSYNMLGEIQGD 146

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            +       +  +  +  +     S+ R+       +    + +L L+      R  L  
Sbjct: 147 FQAFAQNFVRLKTFLNSGYCIQKRSLLRNELADFKDLEQNIIEQLQLQ------RQDLIL 200

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            + +  + + LF    +S  +  +++  +    + ++                  E  LE
Sbjct: 201 GKDEFKVQERLFGDRVISSLEYKKEKSKLLAREMPVKSLTASLIQNRSSQTAKRKEI-LE 259

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N + E   +  Q  +T          +E  +++  +L+P+AGT+ +   +    +   
Sbjct: 260 LDNAIAESKANFRQELQTLQS------SIELWKQRYVVLAPVAGTVSFAAPWQEQQHVAV 313

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              L+ + P         K++   +  VK+G    V+   Y        + I+ KI    
Sbjct: 314 DWELLTVEPPQSGFRGLVKLSQGSLGKVKEGQKVLVKLDGYPHQEFGSIEGILSKIST-- 371

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIEL--RNGFPAEVLFTAKNTTLAQEIIHPITD 432
                       Y   + +     +    +L  R+G          +  L   +I  I D
Sbjct: 372 -----TPGRDSSYWGYVALPHQLETKYGRKLTYRSGLSGTAEVVTTDRRLIARLISTIRD 426


>gi|241068477|ref|XP_002408445.1| tRNA synthetase, putative [Ixodes scapularis]
 gi|215492433|gb|EEC02074.1| tRNA synthetase, putative [Ixodes scapularis]
          Length = 476

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 71/216 (32%), Gaps = 10/216 (4%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            +  +       +      +N       +  E+  L+ +     +++        +++  
Sbjct: 268 FSLLETRIKSEHENILGQYRNFLATENRLIAERDNLEQIEFSDFLMQDINLPEVAKIIHT 327

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                 +  +V+N    ++++++     ++         LE K          +Q  L  
Sbjct: 328 QENLFRSRKEVYNSEKDALHQNIAQLEKKIE-------GLEAKKVAASKTAEVYQDRLKA 380

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           ++ L EK  V +  L  QE  V  S  ++     E   +   I E   +   +   Y + 
Sbjct: 381 LRTLKEKGFVQKAALLDQEAKVAASKSDVATTEAEIAGIRHAITETQIKIINQQNKYTER 440

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              +L + Q   A    K   L  +  +  I SP+ 
Sbjct: 441 TLTELREAQVQTASLKEKYNSLTDSLNRVIIRSPVD 476


>gi|300215465|gb|ADJ79878.1| Salivaricin export accesory protein [Lactobacillus salivarius CECT
           5713]
          Length = 383

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 144/410 (35%), Gaps = 60/410 (14%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            + +   I ++ ++ +S     EI++  +G +    N   I+S  +  I+K  ++ G  +
Sbjct: 22  MIIIPFTILLLVVVIFSFFGKKEITIQGAGTLEALGNNPVIQSTVNSPIEKNYLKEGKYV 81

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  LL + ++   D   L     + L   +         + + +D   +  E      
Sbjct: 82  KKGDTLLIYNNVSIQDKGKLYNSQKEILDRQLAALNLLKQGVQDNHDSFGEDDEF----- 136

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                                    LK  L +  +       +++KS   +A  SS   +
Sbjct: 137 --------------------GYRNDLKSYLQQRNTYLTENTMIQDKSKNDKAKQSSINNE 176

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L                  +++     S  +   + ++ +   + I++L        ++ 
Sbjct: 177 L------------------KKQSGSATSIADFDSSKYDIEINNQKISDLQ-------SSK 211

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L  I +++ + ++  ++  + +     T  +  + +   G +  N  +S S+Y      L
Sbjct: 212 LSSIDQEIIKIKQNISELNANINENNNTNREYKVKAVRDGILHINDEYSESHYISAGANL 271

Query: 319 MKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            +I+P     K   ++A V+   I  +K G     +       +       I KI     
Sbjct: 272 AQILPVLKNQKTLKVKAYVSTADISSIKVGQKVRFKVTR-NVSKPIILTGKIYKISI--- 327

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
                +  + YY++  K TD+  ++ ++ L+ G    ++     TT  + 
Sbjct: 328 -SPVEIGKENYYQIEAK-TDIENTNKDL-LKYGMQGRMVVITGKTTFFEY 374


>gi|54302171|ref|YP_132164.1| hypothetical protein PBPRB0491 [Photobacterium profundum SS9]
 gi|46915592|emb|CAG22364.1| hypothetical secretion protein [Photobacterium profundum SS9]
          Length = 359

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 108/320 (33%), Gaps = 28/320 (8%)

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            I    + +  +  K  V +  +    E L +   + +           +    ++    
Sbjct: 59  EISQISAEVAGVVTKVYVTDNQYVQAGELLAEVDKRDYIALRDQAKSAFAMAEATVDNVN 118

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            R++   +N  +   + +  ++      K+     +L  K  +S++  + Q+  + +S+ 
Sbjct: 119 ERIKLQMININEAATRITSAKSDADFQHKEWQRFSDLLRKKLISKSSYDGQKTQMQQSSA 178

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +L     +     + +  L  E     A   +                 + L + +   E
Sbjct: 179 DLDATKLQLAAAKQQLTTLKTERARMIAQRDQ---------------TDAALDLAKLNLE 223

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              + +PI+G IV N+   +  Y  +  PL+ IVP     +I A     QI ++  G   
Sbjct: 224 DTELRAPISG-IVGNRVVRAGRYVNKGNPLLAIVPIDD-IWIEANYKENQITNIYPGQEV 281

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSD 400
            +    + + +    K  +    P    Q      +  T  + +++    +KI+     +
Sbjct: 282 HINLDSFPNYQ---LKGYVISASPATGAQFSLLPPDNATGNFVKIVQRVPVKISIQLPDE 338

Query: 401 NNIELRNGFPAEVLFTAKNT 420
               +  G  AEV     + 
Sbjct: 339 LRGRIVPGLSAEVEVDTNDK 358


>gi|262274295|ref|ZP_06052106.1| putative type-I secretion protein [Grimontia hollisae CIP 101886]
 gi|262220858|gb|EEY72172.1| putative type-I secretion protein [Grimontia hollisae CIP 101886]
          Length = 433

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 63/425 (14%), Positives = 146/425 (34%), Gaps = 33/425 (7%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N+  + P     + + +++    +     L   +I     G +   D+ V I SP SGII
Sbjct: 27  NISLSKPIKTSALAVSAVVMFYLVF----LAKFDIVSEGEGILAINDSNVNILSPSSGII 82

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY-DV 126
           K   V  G  +  G+ LL  E+IE     +L   +    +  ++   + L FL     D 
Sbjct: 83  KSINVTRGDDVKVGSTLLLIENIEDGHKKELLTFNTDFYKNEVEKFSNDLKFLKKTIKDG 142

Query: 127 LEKAFE-SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
               FE  +   +L    KY +  +K  ++   S             +  L + +L  + 
Sbjct: 143 KPAVFEGDKSVAVLKVESKYETYVNKNSDFNKKS------------ENFKLKKENLNEQE 190

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            LL+       K L                  + +  V K  L++ E+           +
Sbjct: 191 MLLKRKSELIYKSLGET-----------VRYLESKLEVEKIKLQVLESQLLLDEAKSLAD 239

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
             Y +      +  ++   +L ++Q   A  +S+   +    +   I S + G+++  + 
Sbjct: 240 AAYSDFTQTTLDLTEQTEDELLKSQEQLAANISEYNTVTDRIDSTVINSTVDGSVLSIKD 299

Query: 306 -FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +   + +++  ++ +  +    ++ AK   K   ++       ++        +  F 
Sbjct: 300 GLAKGVFIERNAEILTLKRNDDGIFVDAKFDSKFRPYISTNSLVKMKVEA--PGIKNVFY 357

Query: 365 AIIEKIDPIISQ-QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
             I  +       ++   +   YY+  +   +   +   ++   G   +V       T  
Sbjct: 358 GRISDVSVDSFAYEEYAKEGGRYYKARIAFENSDENVKKLKAFIGLKMKVYAINDEMTFI 417

Query: 424 QEIIH 428
           + ++ 
Sbjct: 418 EYVLS 422


>gi|197336352|ref|YP_002155640.1| multidrug resistance protein A [Vibrio fischeri MJ11]
 gi|197317842|gb|ACH67289.1| multidrug resistance protein A [Vibrio fischeri MJ11]
          Length = 322

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 113/374 (30%), Gaps = 85/374 (22%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITW----SILLPIEISVSSSGEILNEDNVVEIK 60
           M +  K+ + A L    +  + G +G   W          + +         + ++  I 
Sbjct: 1   MTELKKKKNKAPLIATVIFILCGALGAGYWYGYGQYFQSTDNAYL-------QGDITTIS 53

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   G I++  VE+  ++  G  L T +D +                             
Sbjct: 54  SKVGGYIQQTLVEDNQKVKAGDLLATIDDRDFLAE------------------------- 88

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                                  +       V    I+++    K++  R+R        
Sbjct: 89  ----------------------KEKAEANVAVNAAAITNLNAERKLQDIRIRQA------ 120

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
             ++    +A L   Q+ +   K L +KN  SQ++L         +   L+  I      
Sbjct: 121 -ASQIESAQADLERAQQQVKRTKALIKKNYSSQDEL-------DNNVSHLKVAIANLDAA 172

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
             +     ++ N+        I   + Q         + L           I +PI G I
Sbjct: 173 KANYQASKEQINV--------IESQIGQANAMLNQAKTALDQANLNLSYTKIYAPIDG-I 223

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V  +S       Q   PL+ +VP  +  +I A     Q++ +  G    V    Y D+  
Sbjct: 224 VGKRSLREGLLVQAGMPLLSLVPTKE-VWIEANFKETQLEKIHHGQKVFVDLDAYPDLH- 281

Query: 361 KKFKAIIEKIDPII 374
              K I+E   P  
Sbjct: 282 --LKGIVESFSPAT 293


>gi|188997289|ref|YP_001931540.1| secretion protein HlyD family protein [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188932356|gb|ACD66986.1| secretion protein HlyD family protein [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 374

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 74/417 (17%), Positives = 141/417 (33%), Gaps = 64/417 (15%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIE---ISVSSSGEILNEDNVVEIK-SPFSGIIKKF 70
            S+    +L +I I  +        IE     V S    +  D +  +  +  SG I + 
Sbjct: 3   KSIGLFVVLVLILIFTVF---AFTWIEHRMKYVISDAVFVETDYLSNVGFNRVSGKIIQL 59

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
             + G  +     +   +D +                      K  L+ +N + + L+K 
Sbjct: 60  YKKEGDAVKADETIAKIDDTDY---------------------KIQLENINYEIESLKKQ 98

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               E QL   + +         N  I+S+             I      L  + S   A
Sbjct: 99  KSQLENQLSRIIHENE------LNQKITSLTTQ---------EIEKKIESLSAQKSQAEA 143

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +   +KD    +NL EK  V +    ++N Q +++      + ++I E         E 
Sbjct: 144 QIEKAKKDEERYRNLLEKGLVPKAKYEEINTQLKVLLDQRKAIEKSISELNVSKAKSKES 203

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            +    +     KEI   +   +        +   LE   +   + SP  G I   +  S
Sbjct: 204 VELVKTQ-GQVSKEIQDQISALENKILALTKQKEDLENQIKYTELKSPYNGIIAK-KYVS 261

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             +  +  QP+  IV  +   YI+  +   ++  VK G  A ++   Y D   K F+  +
Sbjct: 262 IGDIVKAGQPIYAIVKENS-FYIKVLLEETKLSGVKVGNKAYIKLDAYPD---KTFEGEV 317

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           E ID   + +        +  V   I+   F+     +    P ++  T  + +L +
Sbjct: 318 ESIDISSAAK--------FALVPRDISAGEFTKLAQRI----PVKIRITKGDISLLR 362


>gi|218439682|ref|YP_002378011.1| ABC transporter [Cyanothece sp. PCC 7424]
 gi|218172410|gb|ACK71143.1| ABC exporter membrane fusion protein, DevB family [Cyanothece sp.
           PCC 7424]
          Length = 607

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/354 (13%), Positives = 130/354 (36%), Gaps = 47/354 (13%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
            P   SVS+ G +  +  V+++ +P       ++   V+ G ++ +G  +   ++ E   
Sbjct: 224 TPQNRSVSALGYLEPQGEVIKVSAPAFVEGTRVENLLVKLGDRVKKGQVIAILDNRE--- 280

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
                      L+  ++  K+ +    ++ D +    +S + +  D   +  S   +   
Sbjct: 281 ----------RLQAALEQAKTQVFVAQSRLDQVLAGSKSGDIKAQDAKFQRTSAELEGQI 330

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +   +L+ +L+        +L  E +   ++A L++  +D    ++L++  AVS  
Sbjct: 331 RVQKAAIANLEAQLSG------EKLAQEAQIERIKAELNNASQDCARYESLYQDGAVSVQ 384

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ------ 268
             +        +   LRE       ++  + +  +EA       +  + + +++      
Sbjct: 385 QRDHVCLEQQTTEKSLREARANLTRIVSTLTKQIEEAKANLERTVVTLQQQIDEDKARLN 444

Query: 269 ------------NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                        Q       S +   +       + +P  G I+  Q +      + ++
Sbjct: 445 SVEEVRSVDVKVAQAELQAAKSAVQKAQADLNLAYVHAPKDGQILDIQVW-PGELVK-NE 502

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
            ++++   +   Y+ A+V    I  ++ G  A ++     D   K  +  +E+I
Sbjct: 503 GIVELG-QTDQMYVTAEVYETDINQIRAGQKAIIK----CDGIVKDLQGTVEEI 551


>gi|17158755|ref|NP_478266.1| hypothetical protein all7619 [Nostoc sp. PCC 7120]
 gi|17134704|dbj|BAB77262.1| all7619 [Nostoc sp. PCC 7120]
          Length = 570

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 53/386 (13%), Positives = 130/386 (33%), Gaps = 77/386 (19%)

Query: 39  PIEISVSSSGEIL--NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
            ++I + ++G+I       V          + +  VE G+++ +G P+            
Sbjct: 76  RLDIGIKTTGKIETLPSQKVEVTTPISGAKVAELLVEPGARVTKGQPVAVL--------- 126

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
                             S+ DF+N + +  EK                          G
Sbjct: 127 ------------------SSPDFVNLRVESQEK-----------------------LVQG 145

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            + + ++L       ++    +   + + +  ++ ++  Q+     ++L    A+ +   
Sbjct: 146 QADLQQALADLKLAQQNYNRYQNIAQAEIAQAQSQVAFAQEKYNKDQSLVINGALPR--- 202

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD-LEQNQRTFAD 275
               R   +S  +L +   E     R  + +  E  ++ A    +++++ +  +  T+  
Sbjct: 203 ----RTALESQTQLAQAKAELVKANRRGDVIEAENQVQRAQAAVKVAKERINLSNTTYQT 258

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ-QSQPLMKIVPHSKLTYIRAKV 334
            +++L  +   +   T+ +PI G +   Q  +     Q     LM I  +    +  A +
Sbjct: 259 RLAQLGAIANNKGLVTVTAPINGQVTDRQV-TIGQSFQDTGSKLMTIA-NDSEVFATANI 316

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             K +  VK G    V+     +     F   I++I  ++  +             +   
Sbjct: 317 YGKDLGKVKIGQPVNVKVASVPNQI---FTGRIKRIGSVVEGET-----------QVVPV 362

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNT 420
               ++ N +L+ G  AE+      T
Sbjct: 363 QAEINNANGQLKPGMFAELEVVTDKT 388


>gi|254489499|ref|ZP_05102702.1| HlyD family secretion protein [Roseobacter sp. GAI101]
 gi|214042006|gb|EEB82646.1| HlyD family secretion protein [Roseobacter sp. GAI101]
          Length = 218

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 68/218 (31%), Gaps = 5/218 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIG----IIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M  N+       L R+ L   +G    +  L  W+    I  +V++ G+I        ++
Sbjct: 1   MTANVPLRPQTDLGRLFLAGGLGAAILVAVLGGWAATTRISGAVAAHGQIDVAGKPKTVQ 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   G+I    V NG  +  G  L   +       +D+ +  +          ++     
Sbjct: 61  SLDGGVIADLAVANGDAVQAGQILARLDPTLLQINLDMARSRLAAALALRARLEAERAGD 120

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                       +     LD + K  +    +F                 +  I   +  
Sbjct: 121 ATLAFEYADLSGTIRTLNLD-MTKAEAGQRAIFAARAEMRRGGRAQAAGSVEDIKTQQRG 179

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           + ++ + +   L     DL  +++L  K    +  L+ 
Sbjct: 180 VSDQINAIEQQLIYLALDLESLRSLEGKGLARRQQLSD 217


>gi|186680593|ref|YP_001863789.1| secretion protein HlyD, DevB [Nostoc punctiforme PCC 73102]
 gi|186463045|gb|ACC78846.1| secretion protein HlyD family protein, DevB [Nostoc punctiforme PCC
           73102]
          Length = 402

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 58/391 (14%), Positives = 134/391 (34%), Gaps = 55/391 (14%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDI-E 91
              P++++V++ G +  E  V  + +P       + +  V+ G  +  G  L   E+   
Sbjct: 56  AATPVKLAVTALGRLEPEGEVTSLTAPASNNGVRVDRLLVKEGETVKAGQLLAYLENYGR 115

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           +   +      ++  +  +   KS         D  + A    E Q    +    +T ++
Sbjct: 116 SRTALQQALDQLQVAKAKLAQVKSGAK--TGDIDAQKAAIARLEPQYKGDVATQEATIAR 173

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +                                    +A + + Q +    + L+++ A+
Sbjct: 174 I------------------------------------QAEVDNAQAENNRYQQLYKQGAI 197

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           + +  + +   +  +  +L E     K       E   +A  +  +  +  S D++  Q 
Sbjct: 198 AASVADTKALQLKTTQQQLSEAQATLKRTQDTFQEQRKQAQAQLTSISEVRSVDVQVAQT 257

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 + +   +   +   I SPI G I+   + +       S+   +I   S++  I 
Sbjct: 258 EVNSATTSVQQAKADLDLSYIKSPINGKILKIHAKT-GEVISTSRGFAEIGKTSQMYVI- 315

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD------NNLQTQE 385
           A+V    +Q V+ G  AT+    +        K  +++I   + +Q+       +   + 
Sbjct: 316 AEVYQTDVQKVRVGQKATITSTAF----TGTIKGTVKEIGWQVDKQNIFSINPGSDTDRR 371

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             EV + I + A S+    L N    +V   
Sbjct: 372 IVEVKISIDNPADSEKVARLTN-LQVDVAIH 401


>gi|323526968|ref|YP_004229121.1| hypothetical protein BC1001_2645 [Burkholderia sp. CCGE1001]
 gi|323383970|gb|ADX56061.1| hypothetical protein BC1001_2645 [Burkholderia sp. CCGE1001]
          Length = 397

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 48/392 (12%), Positives = 129/392 (32%), Gaps = 57/392 (14%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   + ++++   SG++ +  V + +++ QG PL   E                      
Sbjct: 47  IVSPSEIKVQGL-SGLVSEIYVTSPARVEQGAPLFRLE---------------------- 83

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                 L   ++          +R+EQ+     +Y            + +   L      
Sbjct: 84  ----RDLSLASDGRQRPAFDEHARDEQIRTSEAQYL--------QRKADLSAQLDAARLA 131

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             S       L+ +S   R L +  Q+ L  + ++ +   V+ + + Q   + +++ + +
Sbjct: 132 AESRRAEIAALDEQSGQNRQLAAEAQRALARLDSVSD--YVTADRIEQARALTHETKVSV 189

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL-EKTREQ 289
            +N   ++ +   +                 +   L +    +A E+  + +  E+ R+ 
Sbjct: 190 AQNAARRQQLNAELAATIATHAS--------LEAQLAELSARYARELQDIRMRFEQIRQD 241

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTA 348
            TI +P AG + ++               + I     +      ++  ++   V++G   
Sbjct: 242 ATISAPKAGVVTFSGLV-RGRTLAPDDVALVISTGGKEPLRAALRIPSRRRGFVREGQVV 300

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQ-------QDNNLQTQEYYEVILKITDLAFS-- 399
            ++   +   +   + A I+ I     +              +  Y     ++D  F   
Sbjct: 301 RLKLDAFPYAKFGSYAARIDSISRTTVRSAISPTGASGAHGGEGDYMAWATLSDDQFKFE 360

Query: 400 DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               ++  G  A      +  T+A+ ++ P+ 
Sbjct: 361 RQRFDILPGMTATASIVIERRTIAEWVLAPLF 392


>gi|148548990|ref|YP_001269092.1| secretion protein HlyD family protein [Pseudomonas putida F1]
 gi|148513048|gb|ABQ79908.1| secretion protein HlyD family protein [Pseudomonas putida F1]
          Length = 387

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/317 (14%), Positives = 107/317 (33%), Gaps = 28/317 (8%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I    S L        V +    S+ + L+           +     +++       
Sbjct: 79  QGEITRISSQLGARIETVPVEDNQHVSKGDLLVRLEAADFELAVERARAALATREAEYAQ 138

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             +R+          + + +  +A     + DL+  + L +   VS+  +       + +
Sbjct: 139 AQSRLTQQGSLIAAGQAQLAATQATFDRSRLDLSRAEKLRKPGFVSEERVTTLSADSHVA 198

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             ++ +   + ++  + +  L               + +L++     A+  + L   E  
Sbjct: 199 GSQVDKARADLQSQRQQVTAL---------------NAELKRLDAQIANARTDLAQAELN 243

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I +PI+GTI   ++  +    Q    L+ IVP     +++A     QI  +  G 
Sbjct: 244 LTRCEIHAPISGTI-GQRNARNGQVVQAGAYLLSIVPDED-IWVQANFKETQIGRMHPGQ 301

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAF 398
            A + F  Y D      +  ++ +      Q      +  T  + +V+    +K+T  A 
Sbjct: 302 RAELLFDSYPDT---PIEGRVDSLFAASGAQFSLLPPDNATGNFTKVVQRIPIKLTFSAD 358

Query: 399 SDNNIELRNGFPAEVLF 415
           +  +  +R G       
Sbjct: 359 NPLHGRIRPGMSVTATV 375


>gi|294673458|ref|YP_003574074.1| toxin secretion protein [Prevotella ruminicola 23]
 gi|294473010|gb|ADE82399.1| putative toxin secretion protein [Prevotella ruminicola 23]
          Length = 427

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 56/401 (13%), Positives = 144/401 (35%), Gaps = 35/401 (8%)

Query: 45  SSSGEILNEDNV--VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
              G ++   +     I +   G +++ ++ +G Q+ +G  +   E+   TD +    VS
Sbjct: 51  VVQGRVVVTGDTPPNRIVARADGRLQELRLADGQQVSKGAIIAVVENTANTDDV----VS 106

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +K     +      + F  ++   L    +    Q  D +  Y+          ++   +
Sbjct: 107 VKQAVGKLSVSGEPIPFAADQSLRL-GVVQDAYNQFCDAVVSYNQAV------RLNIYRQ 159

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            +        S+  +  +L+ +  + +      + D    K+L E+   S  ++ Q +R 
Sbjct: 160 QILSAQKEHASLLRHESNLKRQLEMSQQQADLVKHDRDREKSLHERKLTSDAEMEQSQRS 219

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           +  + L    ++ + +  +        + +   A    +  +D++    T    ++ L +
Sbjct: 220 LISAQL----SVEQVRTDISQTQLSIAQIDNRLAELQVQYQQDMQHVTATLQSALNTLKV 275

Query: 283 LEKTREQK-TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQ 340
                E    +++P +G + Y   ++ +      Q +  +V   K  ++ +  +      
Sbjct: 276 AIGQWEHLYALVAPASGKLSYTNVWAVNQNITTGQHIFSVVESRKSCFVGKVLLPATGFG 335

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            VK+G    +    Y  +     +  +  +  + +Q          Y   + +     + 
Sbjct: 336 KVKEGQRVNIMLDGYPYLEFGYLRGTVSGLSAVANQDV--------YVATITLPQGLHTT 387

Query: 401 NNIELR-----NGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
              ELR     +G  AEV+   ++ +LA  II P+   +  
Sbjct: 388 VGRELRFTGELSG-QAEVI--TEDISLAVRIIQPLRYIFHH 425


>gi|119485674|ref|ZP_01619949.1| HlyD family secretion protein [Lyngbya sp. PCC 8106]
 gi|119456999|gb|EAW38126.1| HlyD family secretion protein [Lyngbya sp. PCC 8106]
          Length = 651

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 113/339 (33%), Gaps = 62/339 (18%)

Query: 14  PASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           PA    M L  I+ +    I W+    IE +V + GE+   D   EI++P +G + +  V
Sbjct: 17  PAFWSHMFLWVIMLVSTSAIVWAYFARIEQTVPAVGELEFSDGAREIQAPTTGAVVRLHV 76

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR-------------------CHIDTE 113
           ENG ++++  PLLTF     +  +   +   + L                      +DT 
Sbjct: 77  ENGDRVVKNQPLLTFSPTNPSADLKSLEQVRETLERENQFYEGVVRGQGSGQLSAGLDTL 136

Query: 114 KSALDFLNNKYDVLEKAFESR--------------------------------EEQLLDF 141
            +  +    +   L+   +                                  + Q+ + 
Sbjct: 137 ITEREARIGENQALQSLLDELYNGRGGIGSYNPSLSGLVSNYRAEYISRINTVQLQIQEL 196

Query: 142 LGKYHS---------TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             + +             +V    +      L     ++ S          +    + +L
Sbjct: 197 GKQLNQAEDAEAAARDQLRVAQSQLDYARNQLAYSQEQLNSAREQLELARGQLEKSKEVL 256

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S+++ L  +  L E+ A+++   ++Q++ V +   E+     + +  L  IN+   E N
Sbjct: 257 GSNERILGRLDPLVEEGAIAELQQDRQQQEVLRGENEVLRQQDQIETRLGEINQRQGEIN 316

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                       ++ + +    ++  +   L+    + T
Sbjct: 317 TRRGEVNAR-QGEISRIEAEIQNQRVEQERLQVAISRTT 354



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/436 (10%), Positives = 122/436 (27%), Gaps = 99/436 (22%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL--LDFLGKYHSTC 149
               +D  +  +   +  +++ +  L+    + +  ++   S E  L  LD L +  +  
Sbjct: 217 AQSQLDYARNQLAYSQEQLNSAREQLELARGQLEKSKEVLGSNERILGRLDPLVEEGAIA 276

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL---RALLSSHQKDLTMMKNLF 206
               +     V R     L +   I     ++  +   +   R  +++ Q +++ ++   
Sbjct: 277 ELQQDRQQQEVLRGENEVLRQQDQIETRLGEINQRQGEINTRRGEVNARQGEISRIEAEI 336

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +   V      +QER+    +    +  + +    R +    +E N   A+   ++ R  
Sbjct: 337 QNQRV------EQERLQVAISRTTEQLQNTKDAWARELYTRIEENNKAIASTDAQLGRYK 390

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS-----------------SS 309
            +N +  ++  ++L  +E+ R  + + +P  G +      +                 ++
Sbjct: 391 LENTKRLSEINAQLEKVEQERNTQVLRAPSGGIVYELAPSTKAESELDLNQDEICQYITT 450

Query: 310 NYAQQSQP-----------------LMKIVPHSKLTYIRAKVTPKQIQHV---------- 342
           +      P                 L++I+           V    +  V          
Sbjct: 451 SVLNSGDPQIKRCEEAYYEAQQTETLLQILDDDGGLEAVVYVQNTDVALVLNALRNKREK 510

Query: 343 --------------------------------KKGY------TATVRFPHYADIREKKFK 364
                                           + G          V    +         
Sbjct: 511 LVPYNDQEIAGEVIECTPEKDCVCPESEEARQQLGLGDRDCIPVEVNIDAFPAGEFGTVP 570

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF-----SDNNIELRNGFPAEVLFTAKN 419
             ++ I       D   Q   + +  +++    F      +  + L+ G           
Sbjct: 571 GELKWISQEAIPPDELRQYFSF-KAKIQLEREHFVLSQDEEIKVNLQAGMAVNSKINIGK 629

Query: 420 TTLAQEIIHPITDNWP 435
            T+ Q +   +T  + 
Sbjct: 630 RTVLQMLFSRLTGQFN 645


>gi|119490787|ref|ZP_01623119.1| hypothetical protein L8106_04074 [Lyngbya sp. PCC 8106]
 gi|119453771|gb|EAW34929.1| hypothetical protein L8106_04074 [Lyngbya sp. PCC 8106]
          Length = 556

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 50/411 (12%), Positives = 129/411 (31%), Gaps = 60/411 (14%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +++SG +      V +     G + +  VE G  +  G  +   E  E    +   +  +
Sbjct: 85  ITASGVVQPV-RRVNLSPKTQGRLSELFVEQGDYVEAGQVIARMESREIEAQVLQAEAGL 143

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             +R +++  ++            +   +     L +           V    ++     
Sbjct: 144 ARVRANLNKLQTG--SRPEAITTAQAQLDRVLANLAELEAGTRPEEVAVAQAKLNEAEAR 201

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ---NDLNQQE 220
           L     R  S+       E++ +  +A L    + +   ++L  + AVS+    +  Q E
Sbjct: 202 LAD--ARSGSLDDEIAQAESRLTASQADLELASERVRRYQSLRNQGAVSEDSLEEYLQNE 259

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS----------------- 263
           R +     E +  I + K   R   +  +    +    L+++                  
Sbjct: 260 RRLSAVVNEAKRRIEQLKQSQRSQVDRLEATVEQERQALRQLKNGARVEDIAAATAEVAE 319

Query: 264 --------------RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                          ++   Q    +  +++   +   E   + +P +G I    +    
Sbjct: 320 VRSNLNELINGTRPEEIAAAQAEVREAQAQVRYYQTQLEDANVRAPFSGVIAQRYAV-EG 378

Query: 310 NYAQQSQ--------PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
            +   +             IV  +K   + AK+    I  ++      +    Y D    
Sbjct: 379 AFVTPATSASDATSATSASIVALAKDLEVLAKIPETDIGRIQPNQKVEIIADSYPDQ--- 435

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
            F+  ++ I P   ++ +       ++  ++I     +  ++ L++G   +
Sbjct: 436 VFEGRVQLIAPEAVKERDVTL----FQARVEI----ITGKDL-LQSGMNVD 477


>gi|292659249|gb|ADE34579.1| PlnH [Lactobacillus plantarum]
          Length = 458

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 60/435 (13%), Positives = 154/435 (35%), Gaps = 35/435 (8%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            + +   + ++G I +S++   EI ++ +G +     V  I++  +  IKK  +  G+++
Sbjct: 22  LLIIPVTLLLMGTILFSLVAKREIVINGTGTVQPTGTVPVIQATVNSAIKKNYLVEGARV 81

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  LL + ++   + +    VS + L+  +       D +N   DV     E    +L
Sbjct: 82  KKGQNLLVYTNVFNRNKLREDNVSKRQLQRQVTALDHFKDGINTDSDVFPTTDEFGYREL 141

Query: 139 LDF---LGKYHSTCSKVFNYGISSVY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           L       + + T +++     S+   +   +  T  + +   + +L+   +L  A+ + 
Sbjct: 142 LQSYLKQRQIYLTENQMLAAKSSAASTKKATLTKTAQQVVSNTKTNLDAYQALYNAVANG 201

Query: 195 HQKDLTMMKNLFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            +   +          V++    N+ N ++ +   +  ++++ I   ++ L       +E
Sbjct: 202 SKYANSAKYGSVFNEYVAKSKEANNANDKKEVKSATLADIQQQIDTLQDSLSSAKVQLEE 261

Query: 251 AN-----------------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                              +   + L E++    + ++      + +  L    +  TI 
Sbjct: 262 LQGFDDTKYSVETNNTKLAMLKNDQLSEVAEKRMKAEQDLRTVKADIDSLTTQSKSYTIK 321

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +   G +    ++  + Y      + KI+P     +   ++  ++   I  VK       
Sbjct: 322 ATKTGVLHVADNYRGAKYVSSGAEIAKILPIIKQQRRVNVKLYISTADISSVKVKQAIRF 381

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           +       +      ++ KI     ++        +YEV   +     +D    LR G  
Sbjct: 382 KVTR-NVPKPIILDGVVTKIGVSPVEESKAT----FYEVTAAVP--ITADQAQLLRYGMI 434

Query: 411 AEVLFTAKNTTLAQE 425
            +        T    
Sbjct: 435 GQTAIITGKVTWFDY 449


>gi|166711059|ref|ZP_02242266.1| putative membrane fusion protein RaxA [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 412

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 53/391 (13%), Positives = 119/391 (30%), Gaps = 52/391 (13%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G ++  D ++ I +P SG++    V  G ++  G  L                   ++ R
Sbjct: 60  GTVVPADGMIAITTPQSGVVANVGVVQGQRVAAGQVLFVL------------VAEHRDDR 107

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                                       +Q    L +     ++  +   +      +  
Sbjct: 108 GR------------------------PSQQAAAVLAEQQRLTAEAMDQLRAQGRLQQQAA 143

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS- 226
              +  +      ++ +  +LR      Q      +    +  VSQ  +++++  V    
Sbjct: 144 ARALAGLRNRLEQVDAELGVLRHRQQLTQSIEQRYRTALTRGLVSQQFVDEKQADVLDQR 203

Query: 227 --TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              LEL+       + L        +  +     L      L+ ++RT  ++ +      
Sbjct: 204 AHALELQRERLTLADALAQAQAELQQLPVSLRQQLALAGASLQADRRTAIEQAAA----- 258

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
               +  + +P AG +   +         Q Q L  ++P S  T +      +    +  
Sbjct: 259 ---SRSEVRAPRAGRV-ALRPLQRGQAVGQGQRLADLLPTSTATEVVLYAPSRAAGLIGP 314

Query: 345 GYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           G    +RF         +F   + +I   P   + D  L ++  Y V +++   A     
Sbjct: 315 GIPVQLRFDALPYQHYGQFAGRVVEIAAAPEPPRADAALASEPLYRVRVRLAGDAALRAG 374

Query: 403 IE--LRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               LR G   +     +    +Q    P++
Sbjct: 375 HAAVLRPGMRVQGTLALEWRRFSQWAFEPLS 405


>gi|229148335|ref|ZP_04276618.1| hypothetical protein bcere0012_54120 [Bacillus cereus BDRD-ST24]
 gi|296505881|ref|YP_003667581.1| hypothetical protein BMB171_C5053 [Bacillus thuringiensis BMB171]
 gi|228635129|gb|EEK91676.1| hypothetical protein bcere0012_54120 [Bacillus cereus BDRD-ST24]
 gi|296326933|gb|ADH09861.1| hypothetical protein BMB171_C5053 [Bacillus thuringiensis BMB171]
          Length = 381

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/371 (12%), Positives = 126/371 (33%), Gaps = 20/371 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++    V++GS++ +G  LL  ++ E TD  +     +++L   I   +     + +  
Sbjct: 17  GVVDTVNVKSGSEVKKGDILLQLKNWELTDKQNQGDKIVQHLEKQIGMLEQLKRSIESHK 76

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL--KMKLTRMRSIYLNRLDLE 182
                  + +  +      + + +        I ++  S     +   ++ +   + +++
Sbjct: 77  PSFPNDVDKKIREEYQAYDQRYQSIQNEKENEIKAIANSKTSNEQDEVLQGLIAEKENIQ 136

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +  ++       +  L   K + +       +L  Q+  V K   + +E +  ++  + 
Sbjct: 137 REIDIIEKQ-KIKENILEEQKQVMDDKI---GNLESQKNNVEKRIQQRKETLEHEREKVD 192

Query: 243 HINELYDEANLEFANYLKE-----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              E   E   +     KE     +++ +   ++    +  +L  L    +   I +   
Sbjct: 193 ITKEGKQEQKKDALKQYKEETIISVNQRIHSLEQELFIKKQELDGLHHQNDTTIIKAQKD 252

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G + +       +     Q ++ I+P  +   +R  +  ++I+ +KKG         +  
Sbjct: 253 GIVQFTSILQQGDLLNPGQEIVSIIPKEEQKKVRILLPAQEIKGIKKGDKVQY---SFNL 309

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            R  K    +  +   +    +       YE+   I          EL  G         
Sbjct: 310 QRMDKQMGKVTYVS--VYPTFDKETKGYMYELEATIDTKDLQ----ELHTGMIGRASVVT 363

Query: 418 KNTTLAQEIIH 428
              T+ + I+ 
Sbjct: 364 GEETVWKFILR 374


>gi|296157020|ref|ZP_06839857.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
 gi|295892906|gb|EFG72687.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
          Length = 401

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 67/426 (15%), Positives = 151/426 (35%), Gaps = 73/426 (17%)

Query: 34  WSILLPIEISVSSSG-----EILNEDNVV-EIKSPF-------SGIIKKFQVENGSQILQ 80
           W       I V + G     E+  + +V  EI SP        SG++    V    ++  
Sbjct: 16  WIAYATSAIVVVAIGFGFLHEVELKQDVQCEIVSPSEVKVRGLSGLVTSVYVRPSERVTS 75

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G+PL T          DL   S    R   D++                    R+EQ+  
Sbjct: 76  GSPLFTL-------QRDLSLSSDGRQRTLFDSQ-------------------MRDEQIRV 109

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
              +Y            + +       L    S     + L+ + +  R L    Q+ L 
Sbjct: 110 ADAQY--------AQRKAQLTAQRDASLLTGSSRKAELVALDEQITQNRQLSGESQQKLV 161

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            +K++ +   V+ + + Q     ++  + + + +  ++ +L  I+ L        +  L 
Sbjct: 162 RLKSVSD--YVTADRIEQASADEHQVKVAIAQGVARREQLLGEISTL--------SGTLI 211

Query: 261 EISRDLEQNQRTFADEMSKLTIL-EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +++  L++N       + ++ +  E++R+  TI +P AG + +++  +  +  + S   +
Sbjct: 212 DLNAQLKENDARHEQSIQEIQMRFEQSRQDATISAPQAGVVTFSRLVA-GHTLEASDIAL 270

Query: 320 KIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            I            ++  ++   V+KG    ++F  +   +   ++A I+ I     Q  
Sbjct: 271 VIATDDKGALRAALRIPSRRRGFVEKGQIVRLKFDAFPYAKFGSYEARIDAISDTTMQSS 330

Query: 379 NNLQTQE------------YYE-VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            +L                Y     L+     +   + ++  G  A      +  T+A+ 
Sbjct: 331 PSLPGVPGSLAAQAGGDGDYLAWATLRGKTFDYGKQHFDILPGMRATASIVIERRTIAEW 390

Query: 426 IIHPIT 431
           ++ P+ 
Sbjct: 391 VLAPLF 396


>gi|256830745|ref|YP_003159473.1| secretion protein HlyD family protein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579921|gb|ACU91057.1| secretion protein HlyD family protein [Desulfomicrobium baculatum
           DSM 4028]
          Length = 400

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 49/378 (12%), Positives = 124/378 (32%), Gaps = 31/378 (8%)

Query: 44  VSSSGEIL-----NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           V S G +       +  + +I     G I +  VE+   + +G PL+  + +     +  
Sbjct: 37  VRSMGRVSTDDAFVDGRIYQITPRVDGYIVEDLVEDNQLVEEGQPLMALDPVGYEVGVAQ 96

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  +      + + + ++    ++ +       ++ + LL  L +     +      + 
Sbjct: 97  ARADLATAEAQLASLRKSVPLQISQTEFQVTGARAQRDSLLRGLDQARLEEAAAGQMVLQ 156

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +       +L              N+ S LR      Q      ++  +           
Sbjct: 157 AEAELRNAELNF------------NRFSTLREEGIIAQSVFDEARSALDSARAQAGAARD 204

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           + R   ++   L E++   +  +      ++ A+++      +      + +   A    
Sbjct: 205 RARAAGRNVASLSEDVARLRANIGLAQTGHEVASIKDLEVAAQ------EARVELA--RQ 256

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPK 337
           K+   E       IL+P  G +   +  +        QP+M +VP + +  ++ A     
Sbjct: 257 KVRKAELDLGYTRILAPARGHVTKKKIQA-GQIVAAGQPVMALVPLNPEQLWVTANFKET 315

Query: 338 QIQHVKKGYTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           Q++ V+ G   T+    ++      + ++++     + S          Y +V+ +I   
Sbjct: 316 QLEKVRPGQRVTLVVDTFSGREFTGRVESVMAGTGAVFSLFPPENAMGNYVKVVQRIPVK 375

Query: 397 AFSD---NNIELRNGFPA 411
              D       LR G   
Sbjct: 376 IVLDPVNATEPLRLGMSV 393


>gi|90962881|ref|YP_536796.1| AbpD bacteriocin export accessory protein [Lactobacillus salivarius
           UCC118]
 gi|301299562|ref|ZP_07205827.1| bacteriocin secretion accessory protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|21541358|gb|AAM61786.1|AF408405_14 AbpD [Lactobacillus salivarius]
 gi|90822075|gb|ABE00713.1| AbpD bacteriocin export accessory protein [Lactobacillus salivarius
           UCC118]
 gi|148532708|gb|ABQ84450.1| salivaricin export accesory protein [Lactobacillus salivarius]
 gi|300852833|gb|EFK80452.1| bacteriocin secretion accessory protein [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 384

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 144/410 (35%), Gaps = 60/410 (14%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            + +   I ++ ++ +S     EI++  +G +    N   I+S  +  I+K  ++ G  +
Sbjct: 22  MIIIPFTILLLVVVIFSFFGKKEITIQGAGTLEALGNNPVIQSTVNSPIEKNYLKEGKYV 81

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  LL + ++   D   L     + L   +         + + +D   +  E      
Sbjct: 82  KKGDTLLIYNNVSIQDKGKLYNSQKEILDRQLAALNLLKQGVQDNHDSFGEDDEF----- 136

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                                    LK  L +  +       +++KS   +A  SS   +
Sbjct: 137 --------------------GYRNDLKSYLQQRNTYLTENTMIQDKSKNDKAKQSSINNE 176

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L                  +++     S  +   + ++ +   + I++L        ++ 
Sbjct: 177 L------------------KKQSGSATSIADFDSSKYDIEINNQKISDLQ-------SSK 211

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L  I +++ + ++  ++  + +     T  +  + +   G +  N  +S S+Y      L
Sbjct: 212 LSSIDQEIIKIKQNISELNANINENNNTNREYKVKAVRDGILHINDEYSESHYISAGANL 271

Query: 319 MKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            +I+P     K   ++A V+   I  +K G     +       +       I KI     
Sbjct: 272 AQILPVLKNQKTLKVKAYVSTADISSIKVGQKVRFKVTR-NVSKPIILTGKIYKISI--- 327

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
                +  + YY++  K TD+  ++ ++ L+ G    ++     TT  + 
Sbjct: 328 -SPVEIGKENYYQIEAK-TDIENTNKDL-LKYGMQGRMVVITGKTTFFEY 374


>gi|326800066|ref|YP_004317885.1| secretion protein HlyD [Sphingobacterium sp. 21]
 gi|326550830|gb|ADZ79215.1| secretion protein HlyD [Sphingobacterium sp. 21]
          Length = 451

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 65/404 (16%), Positives = 141/404 (34%), Gaps = 51/404 (12%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSG 65
           LK+    +L R+ L + I  I ++     LP   ++   G +     E+    I++   G
Sbjct: 26  LKKRGVMALGRILLFAAILFIVIL----FLPWRQTIPGRGTVTALKPEERPQTIQNQIGG 81

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI-KNLRCHIDTEKSALDFLNNKY 124
            I+ + V++G ++  G  +L   +   +         + + L     +E++A   +    
Sbjct: 82  RIEHWAVQDGDEVQAGDTILVISETAPSYFDPELPQRLNEQLTAKKSSEQAADQKMLATK 141

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNY-----GISSVYRSLKMKLTRMRSIYLNRL 179
             ++        QL     K     + V         + S Y + K +L R    Y N L
Sbjct: 142 AQIDALTAGLRYQLEAARNKVVQARNVVKIDSADLVAMQSFYETSKARLLRYEQGYKNGL 201

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
                       L+  +     ++N   K   +QN L    + +  +T++L         
Sbjct: 202 ----------FSLTDIETRRLNLQNDEAKVVSAQNKLTNARQTLINATIDLD-------- 243

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
              +I   Y+E+  +  + L          Q   A   +++  +E  R+   + +P +G 
Sbjct: 244 ---NIQAKYNESLAKAQSDLGSALSSKASAQGDIAKLRNEIANIEVRRDHYVVRAPQSGY 300

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV---------KKGYTATV 350
           IV           ++ + +  + P   +  +   V    +  +          +G+  +V
Sbjct: 301 IVKTLKAGIGENIKEGESIATLQPKVTVMAVELYVDAMDVPLILRESDTRLQFEGWP-SV 359

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +F  +  +    F   +  ID + S           Y +++K T
Sbjct: 360 QFSGWPSVAVGTFAGKVAVIDKVSSADGK-------YRLLIKPT 396


>gi|17232839|ref|NP_489387.1| hypothetical protein all5347 [Nostoc sp. PCC 7120]
 gi|17134486|dbj|BAB77046.1| all5347 [Nostoc sp. PCC 7120]
          Length = 399

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 59/389 (15%), Positives = 140/389 (35%), Gaps = 56/389 (14%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFS--GI-IKKFQVENGSQILQGTPLLTFED-IETT 93
            P+ ++V++ G +  +  +  + +P S  GI + +  V+ G ++  G  L   ED    T
Sbjct: 56  APVRVAVTALGRLQPQGQITTLSAPSSTNGIRVDRLLVKEGDEVQAGQVLAYLEDYSRAT 115

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             ++     ++  +  +   K+                                      
Sbjct: 116 AALEQALDKLQIAKIKLAQVKAGAK----------------------------------- 140

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              I +   ++    ++++     +   +   + ++A L++ Q +    + LF++ AVS 
Sbjct: 141 PGDIDAQKATVARLESQLKGEVATQ---QATINRIKAELNNAQTENDRYQKLFKEGAVSA 197

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  + +   +     +L E           + +   EA    ++  +  + D++  Q   
Sbjct: 198 SVFDSKALQLKTVEQQLTEAKASLSRSQNTLADQIKEAKATLSSVKEVRAVDVDLAQMEV 257

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
              ++ +   +  +E   I +PI G I   ++ + +     S     I   S++  I A+
Sbjct: 258 RSAVTAVKQAKADQELTYIKAPIDGRI--LKTHAKTGEVIPSSGFADIGKTSQMYVI-AE 314

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD------NNLQTQEYY 387
           V    IQ V+ G  AT+    ++     K +  + +I   + +Q        +   +   
Sbjct: 315 VYQTDIQKVRVGQKATITSTAFS----GKLQGTVREIGWQVDKQSIFSLNPRSDTDRRII 370

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
           EV + I + A S+    L N    +V   
Sbjct: 371 EVKVSIDNPADSERVGRLTN-LQVDVAIQ 398


>gi|116750737|ref|YP_847424.1| secretion protein HlyD family protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116699801|gb|ABK18989.1| secretion protein HlyD family protein [Syntrophobacter fumaroxidans
           MPOB]
          Length = 423

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 58/371 (15%), Positives = 120/371 (32%), Gaps = 45/371 (12%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  VEN  ++ +G  L+  +  +    ++  + ++      +   + ++   + + 
Sbjct: 67  GTVIRVLVENDRRVEEGRVLVELDPTDYRVAVERAQAALNQNEAEVRAAEISVPLTDAQT 126

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               +A E+  +   D   +                                   +L+N 
Sbjct: 127 SGQARAAEAALKAARDAESQARHRLG-----------------------------ELKNT 157

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S + A L+  Q+D     NL++  A ++    Q    + K+  +L     +       +
Sbjct: 158 RSAVAADLAQFQRDFERFDNLYKTGAGTRRQQEQALTALRKAQAQLAAADSQILATEASL 217

Query: 245 NELYDEANLEFANYL--KEISRDLEQNQRTFADEM-------SKLTILEKTREQKTILSP 295
                +     A +   +    ++E  Q   A          ++L          TI +P
Sbjct: 218 AAATQQVERAGAQFQVAQSDRDNVEIQQYRLASLRAGRDKSSAELEAARLNLSYCTITAP 277

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           I G I   +S       Q  QPLM +VP     Y+ A     Q+++V+ G  A++R   Y
Sbjct: 278 IDGFIAQ-KSVQVGARVQPGQPLMAVVPLQD-IYVEANYKETQLKNVRLGQPASIRADIY 335

Query: 356 AD-IREKKFKAIIEKI----DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
                  K   I          I ++       +    V ++I        +  LR G  
Sbjct: 336 PGWSYTGKVAGIRAGTGAAFSLIPAENATGNWIKVVQRVPVRILLDGPPPRDHPLRLGLS 395

Query: 411 AEVLFTAKNTT 421
             V     + +
Sbjct: 396 LVVTVDTSDRS 406


>gi|325108682|ref|YP_004269750.1| efflux transporter RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
 gi|324968950|gb|ADY59728.1| efflux transporter, RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
          Length = 541

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 49/376 (13%), Positives = 116/376 (30%), Gaps = 56/376 (14%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  GS + +G  +   +     +    +++ +      +   K  L+             
Sbjct: 42  VPEGSIVQKGDIVCELDSSSIEEKARQQEIDVTKAEAALSAAKENLEI------------ 89

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                       + +   S +    ++     L         +   R  +  +  L    
Sbjct: 90  ------------QKNQNASDIAIAALTLELAQLDHDKYINGELPQERDTILGQIRLKEEE 137

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---------------RENIHE 236
           L+  ++     K + +K   S ++L  +   V ++ + L               + NI +
Sbjct: 138 LARKRESYDFTKRMAKKGYRSLSELEAERIAVTQAEINLKVEKDKLRVLEDYTSKRNIAQ 197

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +     +    +    +    L +   + E ++ T   E  K           T+ +P 
Sbjct: 198 LEADATELERELERTRRKAEAALSKAEAEFESSKLTLQVEKEKYQEWLSQIANCTLRAPQ 257

Query: 297 AGTIVYNQSFS-----------SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           AG +VY    S                ++ Q ++ I P + L  I A++    I  +K  
Sbjct: 258 AGEVVYANQRSSRRGNDEPDIIEGATVRERQAIINI-PDNTLMKIDARIHESMISKLKTA 316

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
               +R         + F+  + +I  +           + Y+V + +T+    +    L
Sbjct: 317 QPVLIRCDA---QPGEVFQGTVAEISSVPMSGSFPNYDIKEYQVAINLTET--PERVSAL 371

Query: 406 RNGFPAEVLFTAKNTT 421
           R G  A+     ++ +
Sbjct: 372 RPGLSADFEIVVEDRS 387


>gi|119510456|ref|ZP_01629589.1| hypothetical protein N9414_01682 [Nodularia spumigena CCY9414]
 gi|119464878|gb|EAW45782.1| hypothetical protein N9414_01682 [Nodularia spumigena CCY9414]
          Length = 522

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 112/324 (34%), Gaps = 44/324 (13%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +   + G ++ +G  ++  +  +T   +   K S+   +  +   K+         
Sbjct: 119 GRINQILFKEGDRVQKGQVIIRLQSADTQARLRQAKASLDRTQARLAELKAG-------- 170

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   +R E++     +     +++ N    +    +                 E +
Sbjct: 171 --------TRPEEIAQAKARLVQAETRLKNAQGGARPEEIAQA--------------EAQ 208

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL---NQQERIVYKSTLELRENIHEQKNML 241
             + ++ L   Q      + L    AVSQ++L     ++R       E +  + + +   
Sbjct: 209 IEVAKSDLELAQSRGQRYQQLRTDGAVSQDELEGYLGEQRSAEARLQEAQRRLDQLRKSR 268

Query: 242 RH-INELYDEANLEFANYLKEIS----RDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
              I+EL     LE  N  +  +     ++ Q +    +  +++ + +  ++   +++P+
Sbjct: 269 SSDIDELAAAVELEKQNLKQLENGSRPEEIAQARSQVMEAAAQVQVAQAQQQYTNVVAPL 328

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G I+ N      ++  Q  PL  +   ++   +   +   +++ ++ G    V      
Sbjct: 329 TG-ILGNIPAKVGDFVSQGDPLTTLN-KNETLELNLSIPFSEVERLRVGLPVQV----LD 382

Query: 357 DIREKKFKAIIEKIDPIISQQDNN 380
              +      +  I P IS    N
Sbjct: 383 AEGKPAVTGKVSFISPNISVNTQN 406


>gi|186685154|ref|YP_001868350.1| RND family efflux transporter MFP subunit [Nostoc punctiforme PCC
           73102]
 gi|186467606|gb|ACC83407.1| efflux transporter, RND family, MFP subunit [Nostoc punctiforme PCC
           73102]
          Length = 488

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 47/359 (13%), Positives = 116/359 (32%), Gaps = 38/359 (10%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +++SG+++   +V  I     G++ +  V+ G +I QG  L   +           + ++
Sbjct: 64  ITASGKVVPVQSV-NISPKNPGVLSQLYVQQGDRIQQGQILARMDSASIEAQRSQYRANL 122

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +                 E    SR +++     +     +++      +  + 
Sbjct: 123 AQSQAQLA----------------EALAGSRPQEIAQAKARLAQAQAQLAQARAGNRPQE 166

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +    +++ +          +    + L     +   ++     ++  ++  L + ++ +
Sbjct: 167 IAQSQSQVDAAQAKVNYTSEQVKRYQYLYKEGAEKKQLLDQAISEDKSARASLEEAKKRL 226

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                  R    E       +NE      L       E   ++ Q Q   A   ++L  +
Sbjct: 227 SLVQSGTRS--EEIDQRQAAVNEARAALVLLEDGTRSE---EIAQRQAAVASAEAQLKGV 281

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYIRAKVT 335
           +   E   I +P++G +   +      +           S     IV  ++   I A+V 
Sbjct: 282 QVQLEDTIIRAPLSGIVTQ-KYAEPGAFVTPTTSASTSASATSSSIVAVARGLEILAQVP 340

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
              I  +K G    +    Y D     FK  +  I P    +    Q    ++V + + 
Sbjct: 341 EADIGRIKPGQQVEIVADAYPDQ---VFKGHVRLIAPEAVVE----QGVTSFQVRVALD 392


>gi|213422515|ref|ZP_03355581.1| type I secretion membrane fusion protein, HlyD family [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 86

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 1/85 (1%)

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +M+IVP      I  +++P+ I  +  G  A V+   Y          ++E I P   Q 
Sbjct: 1   MMEIVPVDDRLLIETRLSPRDIAFIHPGQRALVKITAYDYAIYGGLDGVVETISPDTIQD 60

Query: 378 DNNLQTQEYYEVILKITDLAFSDNN 402
               +   YY V ++       + +
Sbjct: 61  KVKPEI-FYYRVFIRTHQDYLQNKS 84


>gi|242240656|ref|YP_002988837.1| secretion protein HlyD [Dickeya dadantii Ech703]
 gi|242132713|gb|ACS87015.1| secretion protein HlyD family protein [Dickeya dadantii Ech703]
          Length = 373

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 126/369 (34%), Gaps = 58/369 (15%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               V+ + S  SG +    V +G  I QG  L+  +D +    +  ++ ++      I 
Sbjct: 54  VVGEVISLASRESGWVMARPVIDGDVIRQGQLLVQIDDRDAQLRLAQQEGNLAAADAQI- 112

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                                           +Y  T  +V +    S     + KL   
Sbjct: 113 --------------------------------RYSETQRQVTDLTTQSALEEARAKLAAT 140

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            S   N          +   LS  Q +      L + N  ++ + ++    + +   ELR
Sbjct: 141 ESAINN----------VGYQLSLAQNNFQRDDQLLKSNLTARKNWDETHTALLQRQSELR 190

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E   +    L  ++    E      + L+ + R ++  ++      +++  + +    + 
Sbjct: 191 EAQAQHNAQLAALHTAEAE-----RSTLQVLDRQIDMQRQQRTAIQAQVDQIRQEIADRA 245

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + SP+ G +         +YAQ  Q LM +V   +  ++ A V    I  +K G    ++
Sbjct: 246 LRSPVDGMV-DRTITHQGDYAQAGQWLM-MVHDPRNLWVEANVKETAIDRIKVGQPVNIQ 303

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIELR 406
              Y D     F+  + ++    + Q     +   +  + ++  ++   +A    +  L+
Sbjct: 304 VDAYPDRH---FQGHVMRVGNTATSQFALLPSPNPSGNFTKITQRVPVRIALDQPDAALK 360

Query: 407 NGFPAEVLF 415
            G  AEV  
Sbjct: 361 PGLMAEVSI 369


>gi|167032517|ref|YP_001667748.1| secretion protein HlyD family protein [Pseudomonas putida GB-1]
 gi|166859005|gb|ABY97412.1| secretion protein HlyD family protein [Pseudomonas putida GB-1]
          Length = 351

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 47/317 (14%), Positives = 112/317 (35%), Gaps = 28/317 (8%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I    S L    +   V +    ++ + L+           +  +  +++       
Sbjct: 43  QGEITRISSQLGARIDTVPVEDNQHVNKGDLLVRLEAADFELAVERAHAALATREAEYAQ 102

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             +R+          + + +  +A     + DL+  + L +   VS+  +       + +
Sbjct: 103 AQSRLTQQGSLIAAGQAQVAANQATFDRSRLDLSRAEKLRKPGYVSEERVTTLSADSHVA 162

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             ++ +   + ++  + +N L               + DL++     A+  + L   E  
Sbjct: 163 GSQVDKARADLQSQRQQVNAL---------------NADLKRLDAQIANARADLAQAELN 207

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I +PI+GTI   ++  +    Q    L+ IVP     +++A     QI H++ G 
Sbjct: 208 LTRCEIRAPISGTI-GQRNARNGQVVQAGAYLLSIVPDED-IWVQANFKETQIGHMQPGQ 265

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAF 398
            A + F  Y D      +  ++ +      Q      +  T  + +V+    +K+T  A 
Sbjct: 266 RAELLFDSYPDT---PIEGRVDSLFAASGAQFSLLPPDNATGNFTKVVQRIPVKLTFSAD 322

Query: 399 SDNNIELRNGFPAEVLF 415
           +  +  +R G       
Sbjct: 323 NPLHGRIRPGMSVTATV 339


>gi|228912274|ref|ZP_04075976.1| hypothetical protein bthur0013_63500 [Bacillus thuringiensis IBL
           200]
 gi|228847378|gb|EEM92330.1| hypothetical protein bthur0013_63500 [Bacillus thuringiensis IBL
           200]
          Length = 391

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 49/390 (12%), Positives = 140/390 (35%), Gaps = 35/390 (8%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           ++      +     GII    V +G ++ +G  L+  ++ E  D    K+  +  L  ++
Sbjct: 17  ISVSRTQVV-----GIIDTVLVRSGDEVKKGDLLIQLKNQELMD----KQKQLNQLISYL 67

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL------ 164
           + +K  L+ L       + +F +  ++ +    K +    +       +  +++      
Sbjct: 68  EKQKDMLEQLKKNVRSNQLSFSNEVDEKIIEEYKAYKQGYQSLQNEKENEIKTIITSKFS 127

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
             +   ++ +   + +++ +  L+       +  L   K++ +   V    + Q ++   
Sbjct: 128 NEQDEILQGLIGEKENIQREIKLVEKQ-KMKEDILEEQKSILDDKVV----VLQSQQNSV 182

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLE------FANYLKEISRDLEQNQRTFADEMS 278
           +  +E R+   E +     +N+   E   E        N +  +++ ++  ++    +  
Sbjct: 183 EKRIEQRKENLESERKKNDVNKEGKEKQKEDVLSQYKENMVISVNQRIQSLEQEIFIKKQ 242

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +L  L+K  E+ +I +   G + ++      +     Q ++ I+P      ++  ++ ++
Sbjct: 243 ELDGLDKQNEKTSIKAQKDGIVQFSSILQQGDLIDPGQEMVSIIPREDEKKVKILLSAQE 302

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I+ +KKG         +      K    +  +        +       YE+   I     
Sbjct: 303 IKDIKKGDKIQY---AFKLKNTDKQMGKVTYLSEH--PIFDKELKSYVYELEATIDTKEL 357

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                EL  G  ++         + + I+ 
Sbjct: 358 H----ELHVGMTSKASVVTGEEPIWKFILR 383


>gi|218678892|ref|ZP_03526789.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           etli CIAT 894]
          Length = 235

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 65/171 (38%), Gaps = 1/171 (0%)

Query: 8   NLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L+   P  + RMTL  +   +   ITW+ +  I+  V + G+++     + ++   + I
Sbjct: 50  ELEERAPPRVARMTLYCVTALLAAAITWASVSSIDEVVIAPGKLVTTQPTIVVQPLETSI 109

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+  +V+ G  +  G  L T +   +   +D ++     L   +   ++ L   +     
Sbjct: 110 IRTIEVKAGEVVHAGQTLATLDATFSQADVDQQQAKFSALDAQVKRIEAELAGADYTKMA 169

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            +   +  + QL      +++   + F   I+    +L     +       
Sbjct: 170 GDTPDQLLQAQLFTQRRAFYTAQLQNFEQQIAGQSAALAASKNQGGGAQRQ 220


>gi|209528110|ref|ZP_03276586.1| efflux transporter, RND family, MFP subunit [Arthrospira maxima
           CS-328]
 gi|209491469|gb|EDZ91848.1| efflux transporter, RND family, MFP subunit [Arthrospira maxima
           CS-328]
          Length = 553

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 53/410 (12%), Positives = 129/410 (31%), Gaps = 52/410 (12%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + ++V +SG +      V +     G + +  VE G ++  G  +   E  E        
Sbjct: 78  LTVTVRASGVVQPV-RRVNLSPKTQGRLAQLYVEQGDRVEAGQIIARMESNELEAQRLQA 136

Query: 100 KVSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFE--------SREEQLLDFLGKYHSTC 149
           +  ++  + ++   +     + + +    LE+A          +R+E++     +     
Sbjct: 137 QARLERTQANLAKLRQGSRPEAIASARARLERAIARLAELQAGTRQEEIAVASARLREAE 196

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS-------HQKDLTMM 202
            ++F+    S+   +    +R+++        + +      L S                
Sbjct: 197 IRLFDARSGSLQNEIDQAQSRIQANLAELELAQGRVQRYEELKSQGAVSEDTLDGYRRDQ 256

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-----ELYDEANLEFAN 257
           + L      ++  L Q +         L   + +++  L+ +      E+  +A  +   
Sbjct: 257 RRLEALQDEAKQRLAQLQENRRSQIERLEATVEQERQNLQQLQNGTRPEVIRQAESDVTE 316

Query: 258 YLKEIS--------RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
              +++         D+   +    +  S+L   +   E   I +P AG I    +    
Sbjct: 317 ARSQLNELENGTRPEDIAAAEADVREAESQLRYYQVLLEDTNIRAPFAGIITQRYAV-EG 375

Query: 310 NYAQQ--------SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
            +           S     IV  +K   + AK+    I  ++      +    Y D    
Sbjct: 376 AFVTPATSASDASSATSTSIVALAKDLEVLAKIPETDIVQIEPLQKVEIVADAYPDQ--- 432

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
            F+  +  I P   ++ +         V L    +        L++G   
Sbjct: 433 VFEGAVHLIAPEAIKERD---------VTLFQARIDIRTGQDVLQSGMNV 473


>gi|104780802|ref|YP_607300.1| HlyD family secretion protein [Pseudomonas entomophila L48]
 gi|95109789|emb|CAK14494.1| putative HlyD family secretion protein [Pseudomonas entomophila
           L48]
          Length = 385

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 110/314 (35%), Gaps = 22/314 (7%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I    S L    ++  V +    ++ + L+           +     +++       
Sbjct: 79  QGEITRISSQLGARIDEVRVEDNQHVNKGDLLVRLEVADFELAIERARAALATREAERVQ 138

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             +R+          + + +  +A L   Q DL   + L +   +S+  +       + +
Sbjct: 139 AQSRLAQQGSLIAAGQAQVAASQATLDRSQLDLNRAQALRKPGFISEERVTTLSADSHVA 198

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             ++ +   + K   + ++ L               + +L++     A+  + L   E  
Sbjct: 199 RSQVDKAQADLKGQRQQVDAL---------------TAELKRLDAQIANARADLAQAELN 243

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I +PI+GTI   +S  +    Q    L+ IVP  +  +++A     QI  +  G 
Sbjct: 244 LTRCEIHAPISGTI-GQRSARNGQVVQAGAYLLSIVP-DEAIWVQANFKETQIGRMHPGQ 301

Query: 347 TATVRFPHYADI-REKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDN 401
            A + F  Y D   E +  ++        S    +  T  + +V+    +K+T  A +  
Sbjct: 302 RAELVFDSYPDTPIEGRVNSLFAASGAQFSLLPPDNATGNFTKVVQRIPVKLTFAADNPL 361

Query: 402 NIELRNGFPAEVLF 415
           +  +R G       
Sbjct: 362 HGRIRPGMSVTATV 375


>gi|195953225|ref|YP_002121515.1| secretion protein HlyD family protein [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932837|gb|ACG57537.1| secretion protein HlyD family protein [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 379

 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 72/423 (17%), Positives = 136/423 (32%), Gaps = 66/423 (15%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + RN    +  + +L +I  +    W     I  +VS +  +             SG I 
Sbjct: 1   MDRNKKIGIAVLVILIVIFSVVAFKWIYY-RITHAVSDAVFVEANTFTDVAYRRDSGRII 59

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K   + G ++L+G PL   +D +        K  IK L   I+  K   D L     +  
Sbjct: 60  KLFKKEGDKVLKGEPLAKIDDTDYKLEYKALKYQIKELESEINLYKIQRDRLLVGTGLEA 119

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A                                     L R      N   + NK   L
Sbjct: 120 QA------------------------------------NLYRTMEATQNMQSIMNKVKAL 143

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM--LRHINE 246
            A +S   KD      L++   +S++   ++E  +     E    +++   M  L     
Sbjct: 144 DAKISLVNKDYHRFHKLYKDGVISRHAFEEKETELKNLLNEKNALLNQANAMASLSKAQN 203

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L           +KE+++ ++  +       +KL  +     +  + SPI+G IV  +  
Sbjct: 204 LGVAIAKNNQKQVKELTQKIDATENQIKSLEAKLQNVSDMIVETELTSPISGYIVK-KFV 262

Query: 307 SSSNYAQQSQPL-----------MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           S  +  +  QP+           + I+      +            +KKG    +     
Sbjct: 263 SVGDVVKPGQPIYAVYNPKSVYVLDII-DETKLH-----------GIKKGCLVHIHIDAL 310

Query: 356 ADIREKKFKAIIEKIDPIISQ-QDNNLQTQEYYEVILKIT-DLAFSDNNIE-LRNGFPAE 412
            +   +   + I +           ++   E+ +V  +I   +  +  NI  LR G+  E
Sbjct: 311 PNEHYEGVVSEILRASAAKFALIPRDITAGEFTKVAQRIPVKIKITKGNINLLRVGYSGE 370

Query: 413 VLF 415
           V  
Sbjct: 371 VAI 373


>gi|107102685|ref|ZP_01366603.1| hypothetical protein PaerPA_01003750 [Pseudomonas aeruginosa PACS2]
          Length = 344

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 57/409 (13%), Positives = 127/409 (31%), Gaps = 76/409 (18%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            +    L  +G+I L  +     I   V S+     +  +  + S     +++  V +  
Sbjct: 7   RRLTVFLVAVGLIALAFFLHWWFIGRHVESTDNAYVQGEITRVASQLGARVEEVLVRDNQ 66

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L+  ED +    ++  + ++      +   +S L                   
Sbjct: 67  HVDKGQLLVRLEDADFKLAVERAQAALATREAELAQARSKLV------------------ 108

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                                S +  S         ++   ++DL    +L +    S +
Sbjct: 109 ------------------QQGSLIAASAADVNASQATLGRAQIDLNRAEALRKPGYVSEE 150

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +    +  L   N V+++ L +    +    ++      E K +   I     E      
Sbjct: 151 R----VTTLTADNHVARSQLAKARADLEAQRVQRDTLGAEIKRLEAQIASARTE------ 200

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                  L   E    +  I SPI+G +   +S  +  Y Q   
Sbjct: 201 -----------------------LAQAEINLSRTLIHSPISGLV-GQRSARNGQYVQVGT 236

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDPIIS 375
            L+ +VP     +++A     Q+  ++ G  A + F  + D   + +  ++        S
Sbjct: 237 HLLSLVPDED-IWVQANFKETQVGRMRDGQKARLTFDAFPDTPIDGRIDSLFAASGAQFS 295

Query: 376 QQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               +  T  + +V+    +KI   A +  +  +R G   E     ++ 
Sbjct: 296 LLPPDNATGNFTKVVQRIPVKIVFEADNPLHGRIRPGMSVEAEVELRDR 344


>gi|296388362|ref|ZP_06877837.1| putative secretion protein [Pseudomonas aeruginosa PAb1]
 gi|313108459|ref|ZP_07794463.1| putative secretion protein [Pseudomonas aeruginosa 39016]
 gi|310880965|gb|EFQ39559.1| putative secretion protein [Pseudomonas aeruginosa 39016]
          Length = 344

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 57/409 (13%), Positives = 126/409 (30%), Gaps = 76/409 (18%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            +    L  +G+I L  +     I   V S+     +  +  + S     +++  V +  
Sbjct: 7   RRLTVFLVAVGLIALAFFLHWWFIGRHVESTDNAYVQGEITRVASQLGARVEEVLVRDNQ 66

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L+  ED +    ++  + ++      +   +S L                   
Sbjct: 67  HVDKGQLLVRLEDADFKLAVERAQAALATREAELAQARSKLV------------------ 108

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                                S +  S         ++   ++DL    +L +    S +
Sbjct: 109 ------------------QQGSLIAASAADVNASQATLGRAQIDLNRAEALRKPGYVSEE 150

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +    +  L   N V+++ L +    +    ++      E K +   I     E      
Sbjct: 151 R----VTTLTADNHVARSQLAKARADLEAQRVQRDTLGAEIKRLEAQIASARTE------ 200

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                  L   E    +  I SPI G +   +S  +  Y Q   
Sbjct: 201 -----------------------LAQAEINLSRTLIHSPINGLV-GQRSARNGQYVQVGT 236

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDPIIS 375
            L+ +VP     +++A     Q+  ++ G  A + F  + D   + +  ++        S
Sbjct: 237 HLLSLVPDED-IWVQANFKETQVGRMRDGQKARLTFDAFPDTPIDGRIDSLFAASGAQFS 295

Query: 376 QQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               +  T  + +V+    +KI   A +  +  +R G   E     ++ 
Sbjct: 296 LLPPDNATGNFTKVVQRIPVKIVFEADNPLHGRIRPGMSVEAEVELRDR 344


>gi|238785287|ref|ZP_04629277.1| Microcin H47 secretion protein mchE [Yersinia bercovieri ATCC
           43970]
 gi|238713800|gb|EEQ05822.1| Microcin H47 secretion protein mchE [Yersinia bercovieri ATCC
           43970]
          Length = 345

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 53/372 (14%), Positives = 115/372 (30%), Gaps = 56/372 (15%)

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++ +G PL   +   TT    + +    ++   I                        
Sbjct: 4   GDKVKKGQPLYQIDISRTTTSGVVSQNQKASIEKQIGA---------------------- 41

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            E ++  + +         N   SS   +L+     ++   +               LS 
Sbjct: 42  IENIILRIKENKKVTVSNLNEQKSSYETALQHSAEILKKAQV--------------GLSM 87

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            +K++   +    +  V+++    Q    Y+   +L     + +     +  L      +
Sbjct: 88  MKKNMENYRLYLHQGLVNKDQFTGQMAQYYQQQNDLLGISSQNEQNALQVITLQSTIQTQ 147

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A+Y  +I   LE  +   A +++             + SP+ G +      +       
Sbjct: 148 AADYDNQIY-QLEIQKNDLARQLAD----ADASGTLVVTSPVEGLVDSLSV-TQGQMINV 201

Query: 315 SQPLMKIVPHSKLTYIRA-KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              L++I+P     Y+    +      ++  G    +R+  +   +  +F   I  I   
Sbjct: 202 GDSLLQIIPGEASHYVLVLWIPSHAAPYISIGDKVNIRYDAFPAEKFGQFPGKILSISGT 261

Query: 374 ISQQDN-----------NLQTQEYYEVILKITDLAFSDNNIELRN--GFPAEVLFTAKNT 420
            + Q                 Q +Y+VI+   + +FS     L    G  A      +  
Sbjct: 262 PATQQEMATYPAAPPKTPDIPQTWYKVIVLPENSSFSYQGRRLDAESGMKATSTLFLEKR 321

Query: 421 TLAQEIIHPITD 432
            L Q I+ P+ D
Sbjct: 322 RLYQWILSPLYD 333


>gi|186686401|ref|YP_001869597.1| RND family efflux transporter MFP subunit [Nostoc punctiforme PCC
           73102]
 gi|186468853|gb|ACC84654.1| efflux transporter, RND family, MFP subunit [Nostoc punctiforme PCC
           73102]
          Length = 540

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 49/388 (12%), Positives = 119/388 (30%), Gaps = 43/388 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + I+VS++G +  E   + +    SGI+K    + G  + QG  +   +D      +   
Sbjct: 72  LTITVSANGTVKPE-RSINLSPKNSGILKTLLAKEGDLVKQGQIVAYMDDSNLRGQLTSA 130

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +     ++    +                 +R + +    G      + +      +
Sbjct: 131 QGQLAQAEANLQKAIAG----------------NRPQDIAQAQGVLDEAQANLQKVQAGN 174

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             + +     R++S        E+     + L ++    L  +         +Q  +N+ 
Sbjct: 175 RSQDIAQAQARLQSAQATLRQAEDDFVRNQQLYNAGGISLQTLNQNRATRDSAQASVNEA 234

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           ++ +            + +     + +      L  A   +E   D+   +         
Sbjct: 235 QQALGLQKA--GSRPEDIEQAQAVVKQRQQALALLKAGTRQE---DINAARAQVTSARGS 289

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT--------YIR 331
           L  ++       I +P  G +   +      +   +    ++   S  +         + 
Sbjct: 290 LQNIQAEINDTIIRAPFDGVVTK-KFADPGAFVTPTTASSEVASSSSSSILSLASTNEVV 348

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A +    I  +  G   ++    Y     K F+  + +I      + N       +EV +
Sbjct: 349 ANLAETNISKISLGQKVSITADAYP---GKTFEGKVSQIAAQAIVEQNVTS----FEVRV 401

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
            ++D         LR+G  AEV F    
Sbjct: 402 SLSDPQRL-----LRSGMNAEVDFQVGQ 424


>gi|110801526|ref|YP_697983.1| bacteriocin ABC transporter putative [Clostridium perfringens
           SM101]
 gi|110682027|gb|ABG85397.1| putative bacteriocin ABC transporter [Clostridium perfringens
           SM101]
          Length = 370

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 53/421 (12%), Positives = 134/421 (31%), Gaps = 78/421 (18%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +N P  +  + ++ +  ++  I WS        +   G +  +     + +  SG I   
Sbjct: 18  KNPPKFMMYIIIIVLALLVAFIVWSTKSVKTYIIKGQGIVTTDTKS-NVMTKMSGEITDV 76

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            +E G  + +G  L++   +E+        + +  ++  I                    
Sbjct: 77  FIEEGKDVNEGDTLISLNPLESN-------LQLGQIQAQI-------------------- 109

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                               +V N  I+ + R+ K       +   N  D E +     A
Sbjct: 110 --------------------QVINNRITLLDRAEKDATNGRNTFNKNNSD-EVEFYNKLA 148

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L++ +K+  + K   +K   +   + + E                 K+     +    E
Sbjct: 149 NLNTKRKEFIVDKEEAKKQGATDEQIEKYE-----------------KSQKNKDDVTRYE 191

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
             L+F N  K++  +  +         ++   LE+  E+  I++P +G +  N   +   
Sbjct: 192 GILQFTNEKKQLEFEKSK-------LEAQKKSLEEAAEEFKIVAPKSGKLHLNVPLNKGM 244

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q    +  +    +   I + +   +   +  G   ++     +       +  +  I
Sbjct: 245 VLQAGSLIGTLTNKEEKIIIESLIPSNERPRIHIGDEVSLAVLGLSQSEYGTIEGQVSSI 304

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSD---NNIELRNGFPAEVLFTAKNTTLAQEII 427
           D   +   +N +   ++++ ++      +D     + L  G   E     +  T  +  +
Sbjct: 305 DEDAT--IDNEKGNVFFKIKIEPQKTYLTDTKGEKVNLTLGMLTETRVKYEKITYMKYFL 362

Query: 428 H 428
            
Sbjct: 363 D 363


>gi|313499916|gb|ADR61282.1| Secretion protein HlyD family protein [Pseudomonas putida BIRD-1]
          Length = 351

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 45/317 (14%), Positives = 107/317 (33%), Gaps = 28/317 (8%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I    S L        V +    S+ + L+           +     +++       
Sbjct: 43  QGEITRISSQLGARIETVPVEDNQHVSKGDLLVRLEAADFELAVERARAALATREAEYAQ 102

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             +R+          + + +  +A     + DL+  + L +   VS+  +       + +
Sbjct: 103 AQSRLTQQGSLIAAGQAQLAATQATFDRSRLDLSRAEKLRKPGFVSEERVTTLSADSHVA 162

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             ++ +   + ++  + +  L               + +L++     A+  + L   E  
Sbjct: 163 GSQVDKARADLQSQRQQVTAL---------------NAELKRLDAQIANARTDLAQAELN 207

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I +PI+GTI   ++  +    Q    L+ IVP     +++A     QI  +  G 
Sbjct: 208 LTRCEIHAPISGTI-GQRNARNGQVVQAGAYLLSIVPDED-IWVQANFKETQIGRMHPGQ 265

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAF 398
            A + F  Y D      +  ++ +      Q      +  T  + +V+    +K+T  A 
Sbjct: 266 RAKLLFDSYPDT---PIEGRVDSLFAASGAQFSLLPPDNATGNFTKVVQRIPIKLTFSAD 322

Query: 399 SDNNIELRNGFPAEVLF 415
           +  +  +R G       
Sbjct: 323 NPLHGRIRPGMSVTATV 339


>gi|322436684|ref|YP_004218896.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX9]
 gi|321164411|gb|ADW70116.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX9]
          Length = 393

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 55/412 (13%), Positives = 125/412 (30%), Gaps = 50/412 (12%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ--VENGSQ 77
           +  L I+   G   WS     +    S+ +   + +V  I +   G +      +++   
Sbjct: 17  VVALLILLCGGAFLWSR----DHGSVSTDDAQVDGHVHPINARVGGTVVWVNPDIDDTKF 72

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  GT L   +  +    ID  +                        DV  +  + +  +
Sbjct: 73  VKAGTVLAHLDTNDYQPAIDRLE-----------------------GDVQAQQAQLQTAE 109

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L   + +  S+        ++S + S       + S          +     A     + 
Sbjct: 110 LAVPITQTTSS------SKLASAHDSEAEAEAELASAKAGVRAASAQVQQAEASSRRAEN 163

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D    + L   + +S+++ + +      +  +L       +   + +            +
Sbjct: 164 DRARYEQLVNSHEISRSEYDTRMTDANVTAAQLSAAQANLQAADQKVQAAEQHIAERKQD 223

Query: 258 YLK---------EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            L               +E+         + L   +       I++P++G IV  +S  +
Sbjct: 224 VLSAATAPELVATARSSVERVSGELKKSKAALHDAQLNLGYTDIIAPVSG-IVGRRSIET 282

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  Q L+ IVP     ++ A     Q++HV+ G   T+    Y    +   ++I  
Sbjct: 283 GQRIAPGQLLLNIVPTDD-IWVTANYKETQLRHVQPGAPVTIHIDTYGSDIQGSVESIGG 341

Query: 369 KIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFT 416
                 +    +  T  Y +V+    ++I       +   L  G   E    
Sbjct: 342 ATGSKYALIAPDNATGNYVKVVQRIPVRIRLKTVLADGRPLLPGMSVETSVR 393


>gi|218247627|ref|YP_002372998.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 8801]
 gi|218168105|gb|ACK66842.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           8801]
          Length = 496

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/340 (12%), Positives = 110/340 (32%), Gaps = 29/340 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +    G I    + V IK    G I +  V+ G ++ QG  ++T ++ +    +   
Sbjct: 71  IEDTSEVVGTIE-ARDTVVIKPEIEGRISQILVKEGDRVQQGQVIITLDNSDWQAELLAA 129

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  + +    +   ++                 +R E + +         +++ N    +
Sbjct: 130 KARLASTEARLAELQAG----------------NRAEDIAEARASLREAQARLANAQGGA 173

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
               +     ++RS        + +      L +         +    +   SQ  + Q 
Sbjct: 174 RPEEIAQAEAQLRSAQAEAELAQQRVKRYDRLQAEGAISADQYQEYTTEARSSQAAVEQA 233

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +R + + T   R +I E    +    +          + +      + Q +   A   ++
Sbjct: 234 QRRLSQLTKNRRSDIDELAAAVERERQNLQRLETGPRSEV------IAQARAEVAQATAQ 287

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           + + E    +  I +PI+G +    +    +Y +Q   L  +   + +  +   +  ++ 
Sbjct: 288 VRMAEVKLSKTQIAAPISGIVGDIPA-EVGDYVEQGNNLTTLT-ENNVLELNLSIPLEKA 345

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
             ++ G    +         +      I  I P ++    
Sbjct: 346 PQLRLGLPVEI----LDVSGQAIATGKISFISPNVTSDSQ 381


>gi|92113141|ref|YP_573069.1| secretion protein HlyD [Chromohalobacter salexigens DSM 3043]
 gi|91796231|gb|ABE58370.1| secretion protein HlyD [Chromohalobacter salexigens DSM 3043]
          Length = 394

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 55/427 (12%), Positives = 125/427 (29%), Gaps = 62/427 (14%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILL---PIEISVSSSGEILNEDNVV 57
           M          +         LL  I ++  + W        +    +    ++ +   +
Sbjct: 7   MTDDASTPPTSHRRLPRGAKWLLLAIIVVLFLVWLGFAIAHRMTHVSAQDARVMADQ--I 64

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            + S   G I  F +  G  +++   + T         +   +  +   R  +D EK+  
Sbjct: 65  TVSSRLDGRITHFTLTEGDMLVENDEIATLYSAPDERRLASLEADVVAQRARLDYEKT-- 122

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                                                  ++   + L+  +   R     
Sbjct: 123 --------------------------------------RLAMAEKQLEGGMNLTRQELDA 144

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
               E  +   +A L+  ++D      L++K++VS+   +Q       +  E  +   E 
Sbjct: 145 SKAAEKAA---QARLTEAERDFKRADALYKKHSVSEQRRDQDYYAYQAALAEHAQAQQEV 201

Query: 238 KNMLRHINELYDEANLEFANYLKE---ISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           +      +             L     + + ++  +R  A   +K        +   I S
Sbjct: 202 QVNQALADNARVGFINGSQMPLPNPDVLRQQVKIAERDLASAAAKRDEERLRLDDLHITS 261

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P  G I          Y    QP++ ++      ++ A +    I  +++G    +    
Sbjct: 262 PSDGVINKTLVD-QGEYVSAGQPIL-MMHDPDKLWVEANIKETDIGELRQGQPVAITVDA 319

Query: 355 YADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIELR-NG 408
           + D     FK  +  I    + Q     +   +  + ++  ++   + F D   EL   G
Sbjct: 320 FPDAI---FKGHVSVIGRAATSQFALLPDPNPSGNFTKITQRLPVRIRFDDGPTELIGPG 376

Query: 409 FPAEVLF 415
              EV  
Sbjct: 377 MMVEVDI 383


>gi|37519589|ref|NP_922966.1| hypothetical protein gll0020 [Gloeobacter violaceus PCC 7421]
 gi|35210580|dbj|BAC87961.1| gll0020 [Gloeobacter violaceus PCC 7421]
          Length = 456

 Score = 96.6 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 50/392 (12%), Positives = 124/392 (31%), Gaps = 44/392 (11%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFS---GIIKKFQVENGSQILQGTPLLTFEDIET 92
             +P + SV   G+++    +   ++  +   G + ++ +  G Q+ +G  +    D++ 
Sbjct: 49  SFIPWQQSVVGKGKVMVLSPMQRPQNIEAQIPGRLVRWNIREGQQVQKGAVVAELADLDA 108

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L   +   ++  +  +  +++              A +SR   +   +     +    
Sbjct: 109 KFLDSNQLARLEQQKRVLVAKRA--------------AAQSRIGSIAAQVTALEGSRGLA 154

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                    +S+  +    +S+     +L      ++ L   H K L   ++L     V+
Sbjct: 155 IPAAQQKAAQSVDRERASRQSLEAAETNLTTAGLNVKRLRELHSKGLRSTRDLE----VA 210

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS---RDLEQN 269
           +ND  +      ++   L     E        +++  +     A+    ++     L   
Sbjct: 211 ENDFVKARTERDRAGAALDAARREVSVGRFDQDKVVFDTAASLASSRASLASARETLATI 270

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +         +  L    EQ+ + +P  G +V      S    +    L  + P +    
Sbjct: 271 EGDILKLDVDIENLRSRTEQRIVRAPSDGVVVRLLKVGSGETVKAGDVLAVVAPATTDRA 330

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPIISQQDNNL 381
           +   ++      V +G    ++F  +  ++           F   +  ID +        
Sbjct: 331 VEIYLSDNDAPLVAEGRPVRLQFAGWPAVQFVGWPSVAVGTFAGRVAVIDAVDDGTSR-- 388

Query: 382 QTQEYYEVILKITDLAFS-----DNNIELRNG 408
                Y VI+   + A            LR G
Sbjct: 389 -----YRVIVVPDEQAQRTEQPWPGPQYLRPG 415


>gi|83945747|ref|ZP_00958091.1| secretion protein, putative [Oceanicaulis alexandrii HTCC2633]
 gi|83850837|gb|EAP88698.1| secretion protein, putative [Oceanicaulis alexandrii HTCC2633]
          Length = 407

 Score = 96.6 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 59/422 (13%), Positives = 138/422 (32%), Gaps = 49/422 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P     +  L  + ++  I   +L  +   +  SG +  +   V + +  +G + +  
Sbjct: 25  HTPPGFIPIAALLSLTLVFAIAMLVLFEVPKVIRISGWVQPDSGFVHLAARDNGFVSEIG 84

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE G ++  G  L       T                                       
Sbjct: 85  VEEGDEVKAGDFLARINGDSTGA-----------------------------------PS 109

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           ++  E++L+   +      +    G  +  +    +   +  +      LE    +   L
Sbjct: 110 QTVNERILERFEERRVLIDRASAQGALAAEQREAARAAELGELQAELGMLEALILIQNQL 169

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           ++  Q  L   + L ++ + S   +  ++R++    LE R      + +   +    +EA
Sbjct: 170 VAVSQDQLEQAEALLDRGSGSLLQVQTRQRLL----LEARAEEERMRGIRAQLTA--NEA 223

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILE-KTREQKTILSPIAGTIVYNQSFSSSN 310
            L   N  + ++   EQ          ++  LE + R    + +P  G +V     +  +
Sbjct: 224 TLSARNQAEALALLQEQALLRDQAIEVEIAALEAQQRAGFALTAPEDGQVVSI-VKTEGS 282

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP-HYADIREKKFKAIIEK 369
                  ++ I+PH +   + A +    I  V+ G    +RF        + + K ++  
Sbjct: 283 SVMTGDRILTILPHFEGLEVHALLPVFAIGSVEPGNRIMMRFDAAAGGGEQLQLKGVVSF 342

Query: 370 IDPIISQQDNNLQT----QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           I        N          ++ +I +I +   S  +  L+ G   +   T +   L + 
Sbjct: 343 ISQAPIDARNFDGPLSADGRFHRLIAEIDEGDESLID-RLKPGMTLQATVTYRREPLWRA 401

Query: 426 II 427
           + 
Sbjct: 402 LF 403


>gi|312882400|ref|ZP_07742141.1| secretion protein HlyD family protein [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369800|gb|EFP97311.1| secretion protein HlyD family protein [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 426

 Score = 96.2 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 65/414 (15%), Positives = 143/414 (34%), Gaps = 46/414 (11%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + LL ++     I       I+ ++   G I   ++V  I S  +G I  + +  GS++ 
Sbjct: 35  IYLLLLLSCFVFIL---NFEIDTNILGRGIITYNNSVYTINSSTAGKINYYDLSIGSKVA 91

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L + +  E ++ I + +  IK     ++  K+  +F+ +                 
Sbjct: 92  KGKLLYSVDVSEKSERIKILESQIKTNMERVERIKTCSNFIKD----------------- 134

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                  +T     N  I+ +   +   +     +Y       +    +  +     K++
Sbjct: 135 -------NTYRGGNNKCINEIREKINNHIALKDELYERIKVSNSFLKEIELINDEISKNV 187

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           ++     E   +S  D N     +    L+L++ + E   ++     +  E +L      
Sbjct: 188 SIQDAAHEYKIISSYDKNSNTISLKSRDLDLKKMVSESNILISQQKIIDTELSLYLNIKE 247

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +E+       +        +L  L    ++  + S I GT+     F           ++
Sbjct: 248 RELEAQQHTLEDKTNQLRVELLQLRDELKKSKVFSGIDGTVTNLSEFGLGTNVTLGDYML 307

Query: 320 KIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            + P++     I A+V  K+   +  G  A +   ++  ++       ++          
Sbjct: 308 SLQPNNSDEAIIIAEVPLKESAWLSAGQEAIISLINFPKVKYGHLVGKVKSF-------- 359

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGF-----PAEVLFTAKNTTLAQEII 427
                +E+YEV++ IT+   S N   L  G      P  V F      L + I 
Sbjct: 360 --YFKKEHYEVVISITENNLSKN---LPEGVFQVNSPVSVHFDVGTRKLYEYIF 408


>gi|113475076|ref|YP_721137.1| chromosome segregation ATPase-like protein [Trichodesmium
           erythraeum IMS101]
 gi|110166124|gb|ABG50664.1| Chromosome segregation ATPase-like protein [Trichodesmium
           erythraeum IMS101]
          Length = 726

 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 109/282 (38%), Gaps = 16/282 (5%)

Query: 14  PASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           PA L R+ L  I I     I W+    I+ +V ++G++  +D  +++++P SG + +  V
Sbjct: 18  PAILSRLFLWMIMIMTSSAIIWAYFAEIDQAVPATGKLELKDGSIDVQAPTSGNVVRLHV 77

Query: 73  ENGSQILQGTPLLTFEDIETTDLID--LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           ENG ++ +  PLLTF     +  +   +K             E        +    L K 
Sbjct: 78  ENGDRVEKNQPLLTFSPTAPSADLGSAIKLKETLKRENKFYEEVLNGKVPRDLPSDLRKL 137

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGI-SSVYRSLKMKLTRMRSIYLNRLD-LENKSSLL 188
            + R+ +L +             N G   ++ RSL+      ++ Y +R+  +E +   L
Sbjct: 138 AQERQTRLSENQAYGALIDELYLNRGRFVNIDRSLQGLYINYKAEYNSRVGAVELQVREL 197

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L   +K         E+ A  Q  + Q +    +  LE  +   +  N  + +   Y
Sbjct: 198 QKQLQQAEKQ--------EEAATEQLRVAQDQLQYSRQQLEFAKQ--QLNNSKQKLTYAY 247

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           ++ N      LK     L   Q        +L + +   ++ 
Sbjct: 248 EQLNNT-EKQLKFAREQLNNTQAQLKYSQEQLKLAKGQLDKS 288



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 57/452 (12%), Positives = 129/452 (28%), Gaps = 121/452 (26%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALD----FLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             + ++  +  +K  +  +   K  LD     L++   +LE+     EE  +  L K   
Sbjct: 260 AREQLNNTQAQLKYSQEQLKLAKGQLDKSGQVLDSNQGILEQISPLVEEGAMAELQKKRQ 319

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL-- 205
              +VF  G S + R      +R   I +   ++ ++ + + A           + NL  
Sbjct: 320 EQ-EVFR-GESELLRQQDQIQSRAGEINIRLGEINSRLADINAREGEVNSRRADLNNLEG 377

Query: 206 ---FEKNAV--SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
                +  +   + D+N +E  V     E++    EQ+ +   IN   ++       + +
Sbjct: 378 EVNTREGEINSRKADINAREGEVKARQAEVQRIRLEQQRLNVSINRTREQLKNTRDAWAR 437

Query: 261 EISRDLEQNQ-------------------RTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           E+   + +N+                   +   +  +++  LE+ R+ + + SP++G I 
Sbjct: 438 ELYARIAENEGREISRIDSQFTRLQLENNKRLTEVNAQIEKLEEARDNQVLKSPVSGVIF 497

Query: 302 YNQSFS-----------------SSNYAQQS-----------------QPLMKIVPHSKL 327
             Q  +                  ++  +                   QPL+ ++   + 
Sbjct: 498 DLQPTTKEESSLDIKTDPICQYVINDVLKPGDIQPERCEDASYEAQQTQPLLTVLDDDEG 557

Query: 328 TYIRAKVTPKQIQHV-------------------------------------------KK 344
                 +  K +  V                                           K 
Sbjct: 558 LKAVVYIQNKDVALVLKALNDKRKKLEPYHDEELAGGEVIACEAGKKCACPELKENREKL 617

Query: 345 GY------TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLA 397
           G          V+               +  I       D       + ++  + +    
Sbjct: 618 GLSDVDCVPVEVQVEALPANEFGTVTGEVISISDDAMPPDQEAGRPYFSFKTTIDLERQT 677

Query: 398 FSDNN-----IELRNGFPAEVLFTAKNTTLAQ 424
           F  +N     I L+NG            T+ +
Sbjct: 678 FVLDNENDLEIGLQNGMAINSNINVGKRTVLE 709



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 80/247 (32%), Gaps = 20/247 (8%)

Query: 64  SGIIKKFQVENGSQILQG---TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
             +I +  +  G  +        L      E    +   ++ ++ L+  +   +   +  
Sbjct: 152 GALIDELYLNRGRFVNIDRSLQGLYINYKAEYNSRVGAVELQVRELQKQLQQAEKQEEAA 211

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +  V +   +   +QL +F  +  +   +   Y    +  + K        +   +  
Sbjct: 212 TEQLRVAQDQLQYSRQQL-EFAKQQLNNSKQKLTYAYEQLNNTEKQLKFAREQLNNTQAQ 270

Query: 181 LENKSSLLR----------ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           L+     L+           +L S+Q  L  +  L E+ A+++    +QE+ V++   EL
Sbjct: 271 LKYSQEQLKLAKGQLDKSGQVLDSNQGILEQISPLVEEGAMAELQKKRQEQEVFRGESEL 330

Query: 231 RENIHEQKNMLRHINELYDEANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILE 284
                + ++    IN    E N   A+       +     DL   +        ++   +
Sbjct: 331 LRQQDQIQSRAGEINIRLGEINSRLADINAREGEVNSRRADLNNLEGEVNTREGEINSRK 390

Query: 285 KTREQKT 291
                + 
Sbjct: 391 ADINARE 397


>gi|58583167|ref|YP_202183.1| putative membrane fusion protein RaxA [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|58427761|gb|AAW76798.1| putative membrane fusion protein RaxA [Xanthomonas oryzae pv.
           oryzae KACC10331]
          Length = 439

 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 51/391 (13%), Positives = 118/391 (30%), Gaps = 52/391 (13%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G ++  D ++ I +P SG++    V  G ++  G  L                   ++ R
Sbjct: 87  GAVVPADGMIAITTPQSGVVANVGVVQGQRVAAGQVLFVL------------AAEHRDDR 134

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                                       +Q    L +     ++      +      +  
Sbjct: 135 GR------------------------PSQQAAAVLAEQQRLTAEAMVQLRAQGRLQQQAA 170

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS- 226
              +  +      ++ +  +LR      Q      +    +  VSQ  +++++  V    
Sbjct: 171 ARALAGLRNRLEQVDAELGVLRHRQQLTQSIEQRYRTALTRGLVSQQFVDEKQADVLDQR 230

Query: 227 --TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              LEL+       + L        +  +     L      L+ ++RT  ++ +      
Sbjct: 231 AHALELQRERLTLADALAQAQAELQQLPVSLRQQLALAGASLQADRRTAIEQAAA----- 285

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
               +  + +P AG +   +         Q Q L  ++P S  T +      +    +  
Sbjct: 286 ---SRWEVRAPRAGRV-ALRPLQRGQAVGQGQRLADLLPTSTATEVVLYAPSRAAGLIGP 341

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIIS--QQDNNLQTQEYYEVILKITDLAFSDNN 402
           G    +RF         +F   + +I  +    + D  L ++  Y + +++   A     
Sbjct: 342 GIPVQLRFDALPYQHYGQFAGRVVEIAAVPEPPRADAPLASEPLYRMRVRLAGDAALRAG 401

Query: 403 IE--LRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               LR G   +     +    +Q    P++
Sbjct: 402 HAAVLRPGMRVQGTLALEWRRFSQWAFEPLS 432


>gi|83590736|ref|YP_430745.1| secretion protein HlyD [Moorella thermoacetica ATCC 39073]
 gi|83573650|gb|ABC20202.1| Secretion protein HlyD [Moorella thermoacetica ATCC 39073]
          Length = 395

 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 118/359 (32%), Gaps = 45/359 (12%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I++  V+ G  +  G+ +   +D E    +   K ++      +   ++         
Sbjct: 66  GRIRQVLVQEGQFVTAGSIIAVLDDAELQGQVAQAKAAVAGAEAQLAQVRA--------- 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                ++         I     +L+      R   ++    + K
Sbjct: 117 --------------------VYTAEQAGVEGNIQMALAALQKLTAGARQQEID--AAQKK 154

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR-- 242
               RA L S Q+ L  M+ L ++  +S     Q +     +  +L         ++   
Sbjct: 155 VDQARAKLQSAQEQLRRMETLHQQGVISDEQYQQAKTNYEVARADLGAAEDNLSLLVSGS 214

Query: 243 -----HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                       E  L   + ++   +D++          + L   E+   + TI +  +
Sbjct: 215 RPEDIAAARANYEVALAGRSQVEARRKDVDAAAAALDKAKAALKTAEEQLAKATIRAKTS 274

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           G ++    FS+        P++ +  P      I   V   +I  VK G  A V    + 
Sbjct: 275 GVVLRCN-FSAGEVVNPGIPIVTLSDPADLWLAI--YVPETEIGKVKVGQQAVVTVDSFP 331

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               K+F   +++I         N+QT+E    ++    ++ ++    L+ G PA+ + 
Sbjct: 332 ---GKRFNGRVKEIAGQAEFTPKNIQTKEERVDLVFKVKISLANEEQLLKPGMPADAMV 387


>gi|291297339|ref|YP_003508737.1| efflux transporter, RND family, MFP subunit [Meiothermus ruber DSM
           1279]
 gi|290472298|gb|ADD29717.1| efflux transporter, RND family, MFP subunit [Meiothermus ruber DSM
           1279]
          Length = 448

 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 64/435 (14%), Positives = 124/435 (28%), Gaps = 95/435 (21%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITW------SILLP-IEISVSSSGEILNE---- 53
           M +   RN         +L + G+     W      +   P +E +    G         
Sbjct: 1   MTQARSRNRIPWRWLAVVLVLAGLGVAAYWFLRPKPTSTAPTLETATVQQGVFRVSVSGP 60

Query: 54  DNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
             +  ++S       +G + K     G ++ +G  ++  +  E          +++N R 
Sbjct: 61  GTLEAVQSLSVKPAVNGTVLKLP-TVGDRVQKGQLIVELDPTEYAR-------ALENARL 112

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            +   ++ LD                         K  +           SV  +     
Sbjct: 113 ALQKAQATLD-------------------------KLRADQQSALASAQQSVSSAEVAYD 147

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           +  R +   R +LE                    + LFE    S   L        K+  
Sbjct: 148 SARRDLEAARTNLEA------------------TQKLFELGGASAQSLQSARDTYAKAQA 189

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            L          +  +N   + A    A      +++L   Q         +   E+   
Sbjct: 190 SLE---------MARVN--LNTARQALALRKSADAQELRNAQIAVDQARLDVKNAEENLA 238

Query: 289 QKTILSPIAGTIVYNQ----SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
              I +P  G +        S         S  L+ ++       +  ++   +I  VK 
Sbjct: 239 STKIYAPFDGVVSEVNAQVGSIGVGATVSNSTALLTLI-DDSSVNLPVQIDESEIAKVKV 297

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G    V    + +     F+ ++  I P  + Q N      +Y V ++I +        +
Sbjct: 298 GQKVEVTLDAFNNET---FEGVVTAISPSATIQQNIAV---FY-VTVRIANPER-----K 345

Query: 405 LRNGFPAEVLFTAKN 419
           LR G  AE    A+ 
Sbjct: 346 LRPGMTAEGEIIAEE 360


>gi|323499388|ref|ZP_08104364.1| Multidrug resistance protein A [Vibrio sinaloensis DSM 21326]
 gi|323315573|gb|EGA68608.1| Multidrug resistance protein A [Vibrio sinaloensis DSM 21326]
          Length = 354

 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 57/420 (13%), Positives = 127/420 (30%), Gaps = 85/420 (20%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +   R + A L    L+  +GI+G   W        S         + ++  I    SG 
Sbjct: 11  QRPHRRNRAPLIATALMLSLGILGGGYWFSYGQYFESTD---NAYLQGDITNISPKVSGY 67

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V +   + QG  L+  +D              ++ R  +D  ++ L         
Sbjct: 68  IAESFVADNQSVKQGDLLVQIDD--------------RDFRAALDQAQAHL--------- 104

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                          S +  S++  + +           +++  
Sbjct: 105 -------------------------------SVMQSSVQNLVAQQTLQRSQIAQAKSQVD 133

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +A      + +   ++L ++N  SQ++L+        +  +L ++             
Sbjct: 134 SAQAEYDRAIQQVARSRSLLKRNYASQDELDSMLAQEKVTKADLEQSKASLAAA------ 187

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                     + L  I+ ++EQ      +  ++L+  +   +   + +P  G I   +S 
Sbjct: 188 ---------NDQLLVIASEIEQANAAVVEAQAQLSQAQLNLDYTKVYAPTDGVI-GKRSV 237

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                 Q   PLM +VP ++  +I A     Q+  + KG    +    +     +  + +
Sbjct: 238 REGLLVQAGAPLMSLVP-NQGVWIEANFKETQLAGIHKGQKVDIELDAFP---GQVLEGV 293

Query: 367 IEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           ++   P           +      T+    V +KI           L  G         +
Sbjct: 294 VDSFSPATGAKFALLPPENATGNFTKIVQRVPVKIIIEDQQQLQGRLLPGLSVVATIDTR 353


>gi|303249457|ref|ZP_07335672.1| secretion protein HlyD family protein [Desulfovibrio fructosovorans
           JJ]
 gi|302489134|gb|EFL49112.1| secretion protein HlyD family protein [Desulfovibrio fructosovorans
           JJ]
          Length = 402

 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 117/381 (30%), Gaps = 45/381 (11%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           +  V  I    +G ++   VE+   +  G  L+T +  +    +   K  +      +  
Sbjct: 52  DGKVHPITPRVAGYVETVPVEDNQLVAPGDVLVTLDPTDYKVALAQAKADLAAAEASLAA 111

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
               +    ++                                 ++S    ++ +   + 
Sbjct: 112 LDLGVPLQLSQTS-----------------------------SKVASAQAEMEGQQRGLD 142

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE---RIVYKSTLE 229
                R   E   + ++A +   + D T +  L  ++ V+Q+DL+  E   R        
Sbjct: 143 QATKERDAAEEAVAQIQAQVDQDKLDFTRISQLRHQDVVAQSDLDSIENKRRGHEAELRA 202

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE------MSKLTIL 283
            R         L  I         + A       + + Q +   A          K+   
Sbjct: 203 ARAKAAAANRGLESIQASIRRLRSQIALAKTGEEQAVIQTKEAAAQRAKVELAKEKVRQA 262

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHV 342
           E   E   I++P+AG +   Q   S       Q LM +VP   +  ++ A     Q++HV
Sbjct: 263 ELNLEYTKIVAPVAGHVTKKQI-ESGRLVAAGQALMTVVPLDPEELWVTANYKETQLKHV 321

Query: 343 KKGYTATVRFPHYADI-REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
             G  AT+    Y         ++I+     + S   +   T  Y +V+ +I      D 
Sbjct: 322 HPGQKATIEVDTYPGREITGHVQSIMAGTGSVFSLFPSENATGNYVKVVQRIPVKIVFDK 381

Query: 402 NI----ELRNGFPAEVLFTAK 418
                 +LR G          
Sbjct: 382 ENGELPKLRLGMSVVPTIHTD 402


>gi|152986956|ref|YP_001347372.1| putative secretion protein [Pseudomonas aeruginosa PA7]
 gi|150962114|gb|ABR84139.1| probable secretion protein [Pseudomonas aeruginosa PA7]
          Length = 344

 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 56/409 (13%), Positives = 127/409 (31%), Gaps = 76/409 (18%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            +    L  +G+I L  +     +   V S+     +  +  + S     +++  V +  
Sbjct: 7   RRLTVFLVAVGLIALAFFLHWWFVGRHVESTDNAYVQGEITRVASQLGARVEEVLVRDNQ 66

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L+  ED +    ++  + ++      +   +S L                   
Sbjct: 67  HVDKGQLLVRLEDADFKLAVERAQAALATREAELAQARSKLV------------------ 108

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                                S +  S         ++   ++DL    +L +    S +
Sbjct: 109 ------------------QQSSLIAASAADVNASQATLGRAQIDLNRAEALRKPGYVSEE 150

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +    +  L   N V+++ L +    +    ++      E K +   I     E      
Sbjct: 151 R----VTTLTADNHVARSQLAKARADLEAQRVQRDTLGAEIKRLEAQIASARTE------ 200

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                  L   E    +  I SPI+G +   +S  +  Y Q   
Sbjct: 201 -----------------------LAQAEINLSRTLIHSPISGLV-GQRSARNGQYVQVGT 236

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDPIIS 375
            L+ +VP     +++A     Q+  ++ G  A + F  + D   + +  ++        S
Sbjct: 237 HLLSLVPDED-IWVQANFKETQVGRMRDGQKARLTFDAFPDTPIDGRIDSLFAASGAQFS 295

Query: 376 QQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               +  T  + +V+    +KI   A +  +  +R G   E     ++ 
Sbjct: 296 LLPPDNATGNFTKVVQRIPVKIVFDADNPLHGRIRPGMSVEAEVELRDR 344


>gi|312794460|ref|YP_004027383.1| efflux transporter, rnd family, mfp subunit [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312181600|gb|ADQ41770.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 663

 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 64/405 (15%), Positives = 134/405 (33%), Gaps = 37/405 (9%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           ++   I +SV+ SG I      V++ S  S  I     ++G  + +G  +   E+ +  D
Sbjct: 63  AVRGNITVSVTGSGPIE-SAQSVDLTSLVSSTITNVFFKDGDSVKKGDVIFELENQDAKD 121

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYD---------VLEKAFESREEQLLDFLGKY 145
            ID  K  I ++   I   + ++  L              V E    S+   +L  +   
Sbjct: 122 KIDSIKSQIDDVSSSIADVQESIKNLVITAPISGYIKNLNVQEGDRVSKGSTVLTIIDTS 181

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               +  F+  +    +     +  +  I  +     +             K   +   +
Sbjct: 182 KLKVTLPFSAALFGKVKIGTPAVVYIPDISQSIQGTVSYLGNTTYTNDYGGKVFDVEITI 241

Query: 206 FEKNAVSQNDLNQQE----RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK- 260
               A+ +      E      VY ST ++     +++N+   ++   +E       ++K 
Sbjct: 242 SNPGALQEGMKASAEIKVGNDVYLSTQDVTLEYVDKENVKAKVDGEVEEIFARNNQFVKK 301

Query: 261 ----------EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                     ++S+ L+  Q    +   +L   E+  E   I +P  G +     F   +
Sbjct: 302 GAVLLKLSNDDLSKQLKNYQTQLKNLQDQLKDAEENLENYYIKAPFDGVVTNIN-FKKGD 360

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  + L   V  +K    R  +    I  +K G    +      + +       + KI
Sbjct: 361 NIKAGEVLAT-VFDNKNLVFRVDIDELDIAKIKVGQKVNITVDALPETQTNPLTGKVSKI 419

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            P+     N + T   Y V + I     +  N+++  G  A    
Sbjct: 420 -PLEGTTQNGVTT---YSVTISID----NPKNLKI--GMNANAEI 454



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 51/159 (32%), Gaps = 15/159 (9%)

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++    ++  +    D  S +  ++++ +   I +PI+G I         +   +   ++
Sbjct: 117 QDAKDKIDSIKSQIDDVSSSIADVQESIKNLVITAPISGYIKNLNV-QEGDRVSKGSTVL 175

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I+  +    +    +      VK G  A V  P  +   +         +  + +    
Sbjct: 176 TII-DTSKLKVTLPFSAALFGKVKIGTPAVVYIPDISQSIQG-------TVSYLGNTTYT 227

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           N    + ++V + I++            G  A       
Sbjct: 228 NDYGGKVFDVEITISNPGALQE------GMKASAEIKVG 260


>gi|317478395|ref|ZP_07937558.1| hypothetical protein HMPREF1007_00674 [Bacteroides sp. 4_1_36]
 gi|316905431|gb|EFV27222.1| hypothetical protein HMPREF1007_00674 [Bacteroides sp. 4_1_36]
          Length = 431

 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/435 (11%), Positives = 133/435 (30%), Gaps = 31/435 (7%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L R   A ++    +  + +               +S+S  I  E   + + +  SG IK
Sbjct: 19  LTRPPHALVRWGITVFFVVLALFFIGGCFFKYPDVISASITITTEHPPIWMVARGSGKIK 78

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +   ++   +  G  +   E+   T+ +             +  + ++ +  ++     +
Sbjct: 79  EVYHKDRDSVWTGNIIAVLENPAVTEDV-----------LRLKRQLASFNPADSSACAGQ 127

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSL 187
              +     + +    +  + +   N+   ++Y        R    Y N +  L  ++ L
Sbjct: 128 FPEKLSLGSIQNAYASFLKSLTDYRNFLSLNLYEQKVEATRRELQEYRNYIAHLNRQAEL 187

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNMLRHI 244
            +  +          K LF++   +Q++  + ++          +L  ++   +     +
Sbjct: 188 DKEQVRIASTVHNREKKLFDEGLTAQSEYEEAKQTFLNKQQNREQLMTSLSSARIQEAQL 247

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +   E  +E +     ++  L+            L  +         +SP +G + YN 
Sbjct: 248 QQSIIETQMEQSRESNNLNIALQTAYNEL------LVSINDWELTCLFISPASGILSYNH 301

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            +  +        +  IV       I + K+       V  G    +    Y  +     
Sbjct: 302 IWQKNQNVGSGDKVFSIVAKDPGNIIGKIKLPAGGSGKVMAGQRVNISVTGYPYMEFGFL 361

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIELRNGFPAEVLFTAKNTT 421
              +  +  +  ++         Y V + +           +E +              +
Sbjct: 362 TGKVTIVSLLADEESA-------YTVTVSLPQDLCTSYGKQLEFKGELTGTAEVMTDERS 414

Query: 422 LAQEIIHPITDNWPK 436
           + + ++ P+   W K
Sbjct: 415 VTERLLSPLRYLWEK 429


>gi|70729428|ref|YP_259166.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
 gi|68343727|gb|AAY91333.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
          Length = 367

 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 111/318 (34%), Gaps = 22/318 (6%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I    S L     +  V +     + + L+   G+            + +       
Sbjct: 62  QGEITRVSSQLSARIEEVLVQDNQHVEQGQLLVRLEGQDFQLAVDRAQAALDTREAERLQ 121

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             +++          + + +  +A L   Q DL+  + L +   VS+  +       + +
Sbjct: 122 AQSKLTQQASLIAAGQAQVASSQASLGRSQIDLSRAQTLRKPGYVSEERVTTLSADNHIA 181

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             ++ +   + +   + +N L               + ++++     A+  + L      
Sbjct: 182 RSQVAKAEADLQGQRQQVNAL---------------NAEIKRLDAQIANARADLAQARLN 226

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I +PI+G I   ++  +    Q    L+ IVP     +I+A     QI H++ G 
Sbjct: 227 LTRSEIHAPISGLI-GQRAARNGQVVQAGAYLLSIVPDQD-IWIQANFKETQIGHMQPGQ 284

Query: 347 TATVRFPHYADI-REKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDN 401
            A + F  Y D   + +  ++        S    +  T  + +V+    +K+T  A +  
Sbjct: 285 KAELTFDAYGDTPIQARVDSLFAASGAQFSLLPPDNATGNFTKVVQRIPVKLTFAADNPL 344

Query: 402 NIELRNGFPAEVLFTAKN 419
             ++R G    V    K+
Sbjct: 345 RGKIRPGMSVTVKVNVKD 362


>gi|220922930|ref|YP_002498232.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
 gi|219947537|gb|ACL57929.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
          Length = 383

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/368 (14%), Positives = 117/368 (31%), Gaps = 81/368 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V +   +  G  L   +D +          ++  ++  ++  ++ +       
Sbjct: 87  GYIAEVLVADNQPVKAGQVLARIDDRDFRA-------ALAQVQAEVEAAEATI------- 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                R+L  ++   +++   +   + +
Sbjct: 133 -------------------------------------RNLGAQIALQKAVVDQQ---DAQ 152

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +L +A L    ++    + L    A +       E  + + T +LR +   +    + I
Sbjct: 153 IALTQASLKFASEEAERYQALVRTGAGTLQRAQATEAGLSEKTAQLRRDRAAKLAAQQQI 212

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             L  E                 + QR  A  +++    E       I++P+ GTI  ++
Sbjct: 213 EVLATEIG-------------RAEAQRDRARALAR--QAELNLSYAIIVAPVDGTI-GSR 256

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     Y Q    LM +VP      + A     Q+  V+ G    V    +A  +    K
Sbjct: 257 TLRVGQYVQAGTQLMAVVPLDAAYVV-ANYKETQLADVRPGQPVEVEVDTFAGRK---LK 312

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFTA 417
             ++ + P    +      +  T  + +++ +I      D+      LR G   E     
Sbjct: 313 GHVDSLSPASGLEFALLPPDNATGNFTKIVQRIPVKIVLDDRKTAGMLRAGMSVEPTIDT 372

Query: 418 KNTTLAQE 425
           + T LA+ 
Sbjct: 373 RETALAEW 380


>gi|218437023|ref|YP_002375352.1| ABC transporter [Cyanothece sp. PCC 7424]
 gi|218169751|gb|ACK68484.1| ABC exporter membrane fusion protein, DevB family [Cyanothece sp.
           PCC 7424]
          Length = 439

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 127/337 (37%), Gaps = 18/337 (5%)

Query: 42  ISVSSSGEILNEDNVVEIK---SPFSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLID 97
            SV++ G I  +  V+++    +     + +  +E G ++ +G  +   +++ +    ++
Sbjct: 60  SSVTALGRIEPKGEVIKLAPAPNMGGAKVVQLLIEEGDRVQKGQVVAILDNLKQEQTAVN 119

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           L +  +K  + ++D  K+       +    ++A   R +  LD     H    +     +
Sbjct: 120 LAQQELKVAQANLDIVKAGAKQGEIEA---QRATIQRLQAQLDGEIATHQVTIERLQAEL 176

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +   +  +  + R+    LN  + + +     AL     +     ++L    A ++  + 
Sbjct: 177 AGEQQEQQATIERL-QAELNDAEKDFQRYQKLALDGVISESDLDQRSLNL--ATARERVA 233

Query: 218 QQERIVYKSTLELRENIHEQKN----MLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + +  + K++  L + I E++      +  + +  DEA        +    D+++ Q   
Sbjct: 234 EAKARLKKTSDTLNQRIAEERANFQKQIDTLQKQIDEAKATLDRIAEIRPVDVQKAQAEV 293

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               + L   +   +   + +P+ G I+   S          + + +I    ++  I A+
Sbjct: 294 DKANAALKQAQADLDLAYVKAPVDGQILKIHSR-PGAKVDDDKGIAEIGNTDQMMVI-AE 351

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           V    I  VK G  A +      +    K    + +I
Sbjct: 352 VYESDISKVKLGQKALI--TSENNTFTDKLTGTVTQI 386


>gi|332667132|ref|YP_004449920.1| hypothetical protein Halhy_5221 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332335946|gb|AEE53047.1| hypothetical protein Halhy_5221 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 432

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 71/420 (16%), Positives = 154/420 (36%), Gaps = 17/420 (4%)

Query: 12  NHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
             P+ + R   L+ + I  L+ W + L+     V +   ++++D  V + +P +  I + 
Sbjct: 20  TPPSWMVRWGSLTALAIFVLLMWLAFLVKYPDVVEADIRLVSKDPPVRLTAPNAIRIDEV 79

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V N +Q+  G  LL F        +   +  I  L    D +       NN        
Sbjct: 80  IVRNNTQVDSGEALLAFRSTANFRHVLTLEDYITALPGLRDEDLLKFKVPNN------LV 133

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               +  L DF        S+++    +S  RS + +++R+      + ++  +   +R 
Sbjct: 134 LGELQADLYDFQDVQIKYNSEMYKNLSTSDLRSSQSRISRLDRSLDYQKEMRQQ---IRE 190

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            ++  +++    ++L   +  SQ+D+N+  R + +   EL     E ++    I+ L  +
Sbjct: 191 QIAEAEQERKNKEHLVSVDQASQDDVNKVLRRIMELNKELARTESEIRDRESEISALRIK 250

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN-QSFSSS 309
                +   KE +   E  + +F    + +   ++   Q  I +P +G +    ++ S +
Sbjct: 251 VRSMESGADKETNFASEVLRESFLRLRAGVITWKQ---QHIIEAPTSGLVQIIGRNVSEN 307

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFPHYADIREKKFKAIIE 368
           N+  + +PL+ IVP      I     P      VK      VR            +  + 
Sbjct: 308 NFVYKDEPLLTIVPVRDKEIIGRMFIPFNRSGKVKLNQKVIVRLESLDYQEYGVLQGEVS 367

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                +S +D+  + +   EV      +  +   +        E     +     + I  
Sbjct: 368 WKS--LSPRDDGQKVEVPIEVRFPQGMVTSAGKQVPTEEELFGEARIITEERRFIERIFS 425


>gi|320107373|ref|YP_004182963.1| secretion protein HlyD family protein [Terriglobus saanensis
           SP1PR4]
 gi|319925894|gb|ADV82969.1| secretion protein HlyD family protein [Terriglobus saanensis
           SP1PR4]
          Length = 419

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/369 (12%), Positives = 115/369 (31%), Gaps = 32/369 (8%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + ++  + +   G + K  V +  ++  G  +   +  +    ++  +  + N +    
Sbjct: 69  VDGDLYAVSARVGGQVIKVNVTDNQEVKAGDVIAEIDPRDYQVALEQAEAELANAKASYV 128

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              S +     +         S        + +     +        +   + K  L   
Sbjct: 129 QASSNVPITATQTQTESATTGSDVASAQAGVAQALKQVAAAQARVAQAQANATKAALDVE 188

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           R   L   D+ +K    +A+ ++      +++   + N ++Q                 +
Sbjct: 189 RYTPLVEKDVISKQQFDQAVATAAGTQAALLE--AQSNVIAQ-----------------Q 229

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           EN+ + ++ L        +AN+     +       +          +K+           
Sbjct: 230 ENVRQMQSKLAQARSQASQANINGPKQVAVQQAKAQGATADIQQAQAKVDQARLNLSYTH 289

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P AG I      +        Q ++ I+P     +I A     Q+Q +K G    ++
Sbjct: 290 ITAPTAGVINKKNV-AVGQNISIGQNMLTIIPLDN-LWITANFKETQLQKMKPGQKVEIK 347

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNI 403
                  +    +  + +I      +         T  Y +V+    ++I      +N+ 
Sbjct: 348 VDALGGRKY---EGHVTQIGGATGSRLSLFPPENATGNYVKVVQRIPVRIDLEPNQNNDH 404

Query: 404 ELRNGFPAE 412
            LR GF  +
Sbjct: 405 LLRPGFSVD 413


>gi|146302630|ref|YP_001197221.1| secretion protein HlyD family protein [Flavobacterium johnsoniae
           UW101]
 gi|146157048|gb|ABQ07902.1| secretion protein HlyD family protein [Flavobacterium johnsoniae
           UW101]
          Length = 359

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/370 (13%), Positives = 109/370 (29%), Gaps = 70/370 (18%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    SG I K  V++   + +G  L T +  +    ID    ++       +  K+ + 
Sbjct: 50  IIPRVSGYISKVYVKDNDYVKKGDTLFTIDKRDYQLKIDEANAALLGAEGQFEAAKADIG 109

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
             N    V +                            + S   S++    R+R +    
Sbjct: 110 SANASISVSD--------------------------AQMRSASGSIESAKIRLRQLT--- 140

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
                              D     NL++ + +++    Q +    K   E +  + EQ+
Sbjct: 141 ------------------NDFNRYNNLYKTHTITKQQFEQAQ--AAKDEAENQVRVLEQQ 180

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                  +   ++  + ++   E++              + L +         + + I G
Sbjct: 181 QRASSYQKSVIQSKSKVSDKQTEVAA------ANIKKAKTMLDVAHLNLSYTVVTAAIDG 234

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +            Q  Q L  I+ +++   + A     Q+  +  G    ++   Y + 
Sbjct: 235 QVSKVDI-QPGQLVQPGQSLFYIINNNEAWVV-ANFKETQLNKMVVGQKVGLKVDAYPNY 292

Query: 359 REKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDNNIELRNG 408
              +FK  +    P    +      +  T  + +      V + I +    +    LR G
Sbjct: 293 ---EFKGTVSSFSPATGSRFSLLPPDNATGNFVKTIQRLPVKITIDESNDPEKVKLLRPG 349

Query: 409 FPAEVLFTAK 418
              +V    K
Sbjct: 350 MNVDVDVHLK 359


>gi|218460640|ref|ZP_03500731.1| probable protein secretion protein, HlyD family [Rhizobium etli Kim
           5]
          Length = 168

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 57/158 (36%), Gaps = 8/158 (5%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
              +  + L  LE  R+   I +P++G +      +  +Y Q  Q +  I P+       
Sbjct: 1   RLKELTATLHQLEHERDLHRIRAPVSGALEQFSGLAHGSYVQSGQTVGWISPNDD-LVAE 59

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             V+P  I  V+ G    ++   +   +    KA + ++    +Q          ++V  
Sbjct: 60  IYVSPNDIGFVQPGQPVRLQVDAFNYNQWGVIKARVVEV----AQDFTLHDGNPVFKVQC 115

Query: 392 KITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
            ++    +  +     L+ G      F   N TL Q +
Sbjct: 116 ALSRSELALKSGAIGHLKKGMTVRARFLLANRTLLQLL 153


>gi|167629584|ref|YP_001680083.1| secretion protein hlyd, putative [Heliobacterium modesticaldum
           Ice1]
 gi|167592324|gb|ABZ84072.1| secretion protein hlyd, putative [Heliobacterium modesticaldum
           Ice1]
          Length = 382

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 55/370 (14%), Positives = 120/370 (32%), Gaps = 44/370 (11%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E  +V ++   SG I + +V  G  +  G  +   +D   +  +   +  ++     +
Sbjct: 49  TIEGTMVPVQPEVSGRIVELRVTEGQTVEAGQVIALLDDQTASISLAAAESDLRQAEAKL 108

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                           L+    SR E++           + V      ++    K  L R
Sbjct: 109 ----------------LDLLNGSRVEEIRRQRATVDQFQAVVNQNR--NLIDQYKANLAR 150

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
                                L   ++ L   + LF+  A+S  +L+ Q+     +  + 
Sbjct: 151 D-----------------EENLRREEQILKENQALFDAGALSARELDNQKTRAKTARAQA 193

Query: 231 RENIHEQKNMLRHINELYDE---ANLEFANYLKEISRDLEQNQRTFAD-EMSKLTILEKT 286
                + +     +     +   A       L   +    Q Q+   D    K+ + +  
Sbjct: 194 EATKAQVEAAKFQVESAEAQRSGAQAGLDLALAGYTEPTIQAQKAVVDGLKEKVRLAQVN 253

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I SP+ G ++Y    +       +  ++ ++      +++  V    +  +  G 
Sbjct: 254 AGKAIIKSPVQGRVLYKHVET-GQVVNTASRIITVL-DENDLWVKVFVPEALLGGLSVGT 311

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            A V    Y D     F A + +I         N+QT+E    ++       ++    L+
Sbjct: 312 AAAVSVDAYPDE---SFAATVTQISDKAEFTPKNVQTKEERTNLVFSVKTKLTEGLDRLK 368

Query: 407 NGFPAEVLFT 416
            G PA+V+F 
Sbjct: 369 PGMPADVVFQ 378


>gi|88810957|ref|ZP_01126213.1| hypothetical protein NB231_09153 [Nitrococcus mobilis Nb-231]
 gi|88791496|gb|EAR22607.1| hypothetical protein NB231_09153 [Nitrococcus mobilis Nb-231]
          Length = 477

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/383 (13%), Positives = 122/383 (31%), Gaps = 46/383 (12%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKF 70
           P  L+   L++    + L      +P   ++++ G++      D   +I +  +G IK++
Sbjct: 47  PNRLRTAGLVAASLFVLLTIAVAFIPWTQTITAHGQLSAYSPFDRPQDIHAKITGRIKQW 106

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G ++ +G  ++  ED++   +       ++  +  +   +              +A
Sbjct: 107 HVLEGEEVSRGALIVELEDVDPKFMAPELLELLRQSKEALAQTR--------------EA 152

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              R EQL   + +             + V  +        + I   R+  +      + 
Sbjct: 153 AIDRAEQLSQRIEEMKKLSQAAVPSAKARVLEAENKIQAVTQQIVSARIAYQTAQLNAKR 212

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR-------- 242
            L            L E   VSQ +L    + +  +   L+     ++   +        
Sbjct: 213 HL-----------QLAENGLVSQRELEVAVQTLIATQANLKAAQAAREQAKQAKQALTFG 261

Query: 243 --HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              I     +  L+          +        A    +L+   + R    + +PI GT+
Sbjct: 262 RDQIGADMAQRLLDTKAARAAARAEAASAAEKLAGMKLRLSNAAQRRRAARVTAPIDGTV 321

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF-------- 352
           V      +       + L++I P S    +  +        ++ G    + F        
Sbjct: 322 VRMTHVGAGELVTPGERLVRISPLSHSRAVEFRAKGLDAPLLRPGRKVRLLFKGMPAIPI 381

Query: 353 PHYADIREKKFKAIIEKIDPIIS 375
           P + +I    F   I+ +D +  
Sbjct: 382 PGWPEIMSGTFGGEIKVVDQLDD 404


>gi|224535346|ref|ZP_03675885.1| hypothetical protein BACCELL_00208 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224523035|gb|EEF92140.1| hypothetical protein BACCELL_00208 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 464

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 69/418 (16%), Positives = 154/418 (36%), Gaps = 24/418 (5%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L+R   L+ I ++ ++  S        ++SS  + + +  + I +  SG I+   + +  
Sbjct: 59  LRRGITLTAIIVVVILLGSAFFKYPDVITSSVVLTSTNPAISIVAKSSGRIQHLYINDNQ 118

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            I +G+ L   E+      +            H+     +++ L+    +  K  E    
Sbjct: 119 YIDKGSYLAVIENSAKPHDV-----------LHLKKYLLSINSLDTINLLPNKGLEV--G 165

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            L      ++ T S+   +     Y   +K    ++    ++  D+  +  L+       
Sbjct: 166 NLQALYSSFYLTLSEYIRFKREQYYFLKIKWVQEKIEQYKVSYQDILRQKILVEEQFEIG 225

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           QK       LF +  +S+ +L        +  L L        NM     ++  E+  + 
Sbjct: 226 QKQYRRDSTLFVQKLLSEENLENSYNNYLQRKLTLENIYATLNNMQLQTLQMC-ESLSDM 284

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                E   +LE     +  ++  +T ++       I++PI+G I + Q +S +      
Sbjct: 285 EFQYSEKKNNLETQVNNYITQL--ITEIQNWELSYVIIAPISGQITFTQYWSINQNIASG 342

Query: 316 QPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           +P+  IVP  K   + +A +  ++   VK G T  V F ++ +      K +I+ I  + 
Sbjct: 343 EPIFNIVPEEKGLLMGKALLPAERSGKVKIGQTVNVSFDNFPNNEFGIVKGVIKNISLVP 402

Query: 375 SQQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           S+ +        Y V + +    +   +  +        +      + +L +  + PI
Sbjct: 403 SEIEKKKI----YIVEILLPKGLITSYNKELPYLLEMEGKAEIITDDLSLLERFLLPI 456


>gi|261494537|ref|ZP_05991021.1| secretion permease [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261309786|gb|EEY11005.1| secretion permease [Mannheimia haemolytica serotype A2 str. OVINE]
          Length = 305

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 109/306 (35%), Gaps = 23/306 (7%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           +        +       +   ++     ++++      D ++    +   ++ + + +  
Sbjct: 1   MKSQIQATEQAITALYKNKSETINSLEKQIKNSQKIYQDKQSYLVEIEKSMNDYAELVKR 60

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L +    S +++N Q+   ++     +   +E K  L  +         E      E
Sbjct: 61  YEKLLKVGHSSHDEVNIQKSRYFQQ----KSLFNELKQELIQLKSTQLSLENEIETRKTE 116

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            +  + + +   +D   +L   E +     + + + G I  + S +     +++ PL +I
Sbjct: 117 FNNQIIRYEMQKSDLNIRLMEFE-SVSDIIVNASLDGKI-ESTSVTVGQIIKENDPLAQI 174

Query: 322 VPHSK---LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ-- 376
           +P +K      +   V    I  +K+G    +R+  +   +  +FK  I  I  + +   
Sbjct: 175 LPQNKGNYQLVM--WVPNSAISFIKQGDEVNIRYEAFPFEKFGQFKGKITSISTLPASLQ 232

Query: 377 --------QDNNLQTQEYYEVILKITDLAFSDNNIELR--NGFPAEVLFTAKNTTLAQEI 426
                     N  Q    Y++++++ D     N+  L   +G  AE     +   L + I
Sbjct: 233 ELSFYKNLPVNLEQGIPLYKILIELADQNVKYNDTSLYFMSGMKAEATLFLEKRKLYEWI 292

Query: 427 IHPITD 432
             P+  
Sbjct: 293 FFPMYQ 298


>gi|282896470|ref|ZP_06304490.1| Secretion protein HlyD [Raphidiopsis brookii D9]
 gi|281198576|gb|EFA73457.1| Secretion protein HlyD [Raphidiopsis brookii D9]
          Length = 488

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 62/387 (16%), Positives = 131/387 (33%), Gaps = 65/387 (16%)

Query: 49  EILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            I     V  I+S       +G++ + +VE G ++ QG  +   +D E    I   + ++
Sbjct: 68  RITASGKVQPIQSVNVSPKNAGLLAELKVEQGQKVEQGQIIARMDDSEIRMGILQFQANL 127

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  +  +   ++                 SR E +     + +   +++      S  + 
Sbjct: 128 EQAKAQLADAQAG----------------SRVEDIAQAKARVNQAKAQLEIISSGSRSQE 171

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ----- 218
           ++                +      R+ L   Q  L   +NL ++ A+SQ+ L+Q     
Sbjct: 172 IEQA--------------KASVEGARSQLELTQARLKRYQNLAKEGAISQDTLDQYSTEN 217

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS----RDLEQNQRTFA 274
           +         E R ++ E  N  + I +       E     K  +    +++ + Q    
Sbjct: 218 KRAKFNLQEAEKRLSLQEAGNRQQEIRKQQAVVTQEIEGLRKLQNGSRPQEIVRLQAVVE 277

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSK 326
              S+L   +   E   I +P AG I    +     +           S     IV  ++
Sbjct: 278 AARSQLKRQQVQLEDTIIRAPFAGIITQKYAN-IGAFVTPTTSASSSTSATSSSIVALAR 336

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A V    I  +K+G    +    Y    E+ F   +     +++ +    Q    
Sbjct: 337 GLEVLALVPEADIARIKQGQQVEIISDAYP---EQVFTGRV----RLVAPEAVIEQGVTS 389

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEV 413
           ++V + I      +   +LR+G   +V
Sbjct: 390 FQVRIFI-----VNGGDKLRSGLNVDV 411


>gi|78221879|ref|YP_383626.1| secretion protein HlyD [Geobacter metallireducens GS-15]
 gi|78193134|gb|ABB30901.1| Secretion protein HlyD [Geobacter metallireducens GS-15]
          Length = 335

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 61/407 (14%), Positives = 125/407 (30%), Gaps = 93/407 (22%)

Query: 21  TLLSIIGIIGLITWSIL---LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            +  ++  +  I W +         +V+ SG I   +  VE+     G +++  V+ G  
Sbjct: 7   LIAILLLAVAAIAWFVTRRTGNDSSTVAVSGTIELTE--VEVSFKIPGRVRERLVDEGEL 64

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  +   +D               +LR  +   +   + +      LE  F   +  
Sbjct: 65  VKAGQVVARLDD--------------DDLRLEVAQRERDTEAMAANLRELETGFRKEDIV 110

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D                                             + ++A     + 
Sbjct: 111 RAD------------------------------------------AAVNRVKAETDRLKA 128

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D    + LF ++ +S+ D +  +     S   LRE + +Q+ M R   +           
Sbjct: 129 DFARQEALFRRDVISRRDYDAAKAAHESSQAALREAVAQQELMHRGPRK----------- 177

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                   ++  +  F      L +        T+ +P+AG ++               P
Sbjct: 178 ------EQIDAARARFGQARETLELARTRLGYTTLAAPMAGLVLAKHV-EPGEQVAAGTP 230

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           ++  V     T++RA +    +  VK G  A V+   + D R    +  +  I P     
Sbjct: 231 IIS-VGDMPNTWMRAYIAETDLGRVKVGQKARVKSDTWPDRRY---EGTVTFISPEAEFT 286

Query: 375 --SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             S Q    + +  Y + + I + A      EL+ G P +      +
Sbjct: 287 PKSVQTEKERVKLVYRIKITIPNPAM-----ELKPGMPVDAEIGTGD 328


>gi|302872673|ref|YP_003841309.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575532|gb|ADL43323.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 664

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 136/401 (33%), Gaps = 39/401 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I +SV+ SG I      V++ S  S  I     ++G  + +G  +   E  +  D ID  
Sbjct: 68  ITVSVTGSGPIE-SAQSVDLTSTVSSTITNVFFKDGDSVKKGDVIFELESQDAKDKIDSI 126

Query: 100 KVSIKNLRCHIDTEKSAL---------------------DFLNNKYDVLEKAFESREEQL 138
           K  I ++   I   + ++                     D ++    VL     S+ +  
Sbjct: 127 KSQIDDVNSSIADVQESIKNLVITAPISGYVKNLNVQEGDRVSKGSTVLTIIDTSKLKVT 186

Query: 139 LDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           L F                 I  + +S++  ++ + +      D   K   +   +S+  
Sbjct: 187 LPFSAALFGKVKIGAPAVVYIPDISQSIQGTVSYLGNTTYTN-DYGGKVFDVEITISNPG 245

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LRENI-HEQKNMLRHINELYDEANLE 254
                MK   E    S+  L+ Q+  +     E ++  +  E + +    N+  ++  + 
Sbjct: 246 ALQEGMKASAEIKVGSEVYLSTQDATLEYVDKENVKAKVDGEVEEIFARNNQFVEKGAVL 305

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                 ++S+ L+  Q    +   +L   E   E   I +P  G +     F   +  + 
Sbjct: 306 LKLSNDDLSKQLKNYQTQLKNLQDQLNDAEDNLENYYIKAPFDGVVTNIN-FKKGDNIKA 364

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + L   V  +K    R  +    I  +K G    +      + +       + KI P++
Sbjct: 365 GEVLAT-VFDNKNLVFRVDIDELDIAKIKVGQKVNITVDALPETQTNPLTGKVAKI-PLV 422

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               N + T   Y V + I     +  ++++  G  A    
Sbjct: 423 GTTQNGVTT---YSVTISID----NPKDLKI--GMNANAEI 454



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 52/165 (31%), Gaps = 15/165 (9%)

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++    ++  +    D  S +  ++++ +   I +PI+G +         +   +   ++
Sbjct: 117 QDAKDKIDSIKSQIDDVNSSIADVQESIKNLVITAPISGYVKNLNV-QEGDRVSKGSTVL 175

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I+  +    +    +      VK G  A V  P  +   +         +  + +    
Sbjct: 176 TII-DTSKLKVTLPFSAALFGKVKIGAPAVVYIPDISQSIQG-------TVSYLGNTTYT 227

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           N    + ++V + I++            G  A       +     
Sbjct: 228 NDYGGKVFDVEITISNPGALQE------GMKASAEIKVGSEVYLS 266


>gi|77458104|ref|YP_347609.1| secretion protein HlyD [Pseudomonas fluorescens Pf0-1]
 gi|77382107|gb|ABA73620.1| putative HlyD family efflux pump protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 349

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/321 (15%), Positives = 112/321 (34%), Gaps = 28/321 (8%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I    S L    ++  V +     + + L+              N  +++       
Sbjct: 43  QGEITRVSSQLSARIDEVLVQDNQHVEKGQLLIRLEPNDFRLAVDRANAALATREAERLQ 102

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             +++          + + +  +A L   Q DL+  + L +   VS+  +       + +
Sbjct: 103 AQSKLTQQASLIAASDAQVATTQATLGRSQVDLSRAETLRKPGYVSEERVTTLSADAHIA 162

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             ++ +   + ++  + +N L  E     A                 A+  + L   E  
Sbjct: 163 RSQVAKAQADAQSQRQQVNALTAEIKRLDAQ---------------IANARADLAQAELN 207

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I +PI+G I   ++  +    Q    L+ IVP     +++A     QI H++ G 
Sbjct: 208 LTRSEIHAPISGLI-GQRAARNGQVVQAGAYLLSIVPDED-IWVQANFKETQIGHMQPGQ 265

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAF 398
            A + F  Y D      +A ++ +      Q      +  T  + +V+    +K+T  A 
Sbjct: 266 KAELLFDAYGDT---PVEARVDSLFAASGAQFSLLPPDNATGNFTKVVQRIPVKLTFKAD 322

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
           +  + ++R G         K+
Sbjct: 323 NPLHGKIRPGMSVTATVNIKD 343


>gi|172035329|ref|YP_001801830.1| hypothetical protein cce_0413 [Cyanothece sp. ATCC 51142]
 gi|171696783|gb|ACB49764.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 511

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/323 (11%), Positives = 101/323 (31%), Gaps = 44/323 (13%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V  G  I +G  +L  +  +    +   +  + + +  +   ++         
Sbjct: 110 GRINEILVREGDLITKGQQILQLDSSDWQAELLEAQAQLASRKARLAELEAG-------- 161

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   +R E + +   +     +++ N         +                 E +
Sbjct: 162 --------NRVEDIQEAKARLREAKARLSNAQAGGSLEEIAQA--------------EAQ 199

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +A     Q+ +   K L ++ AVS ++  +       ++ EL +       + +  
Sbjct: 200 VNAAQASAELAQQRVARYKTLEQEGAVSTDEYQEYVTEARNASAELEQAQRRLSQLKKSR 259

Query: 245 NELYDEANLEFANYLKEISR--------DLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
               DE         + + R         + Q +   A+ ++++   E    +  I++PI
Sbjct: 260 LTDIDELQAAVEREEQNLRRLQTGPRQEVIAQARADVAEAIAQVRTAEVNVSKTRIVAPI 319

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G +       + +Y  Q   L  +   +    +   +  +    ++ G    +      
Sbjct: 320 SGIVGDIPV-EAGDYVGQGDTLTTLT-QNHFLELNLSIPLEDASRLRLGLPVQI----ID 373

Query: 357 DIREKKFKAIIEKIDPIISQQDN 379
           +  +      I  I P ++    
Sbjct: 374 NQGKAIATGNISFISPNVTADSQ 396


>gi|86609023|ref|YP_477785.1| membrane fusion protein family protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86557565|gb|ABD02522.1| transporter, membrane fusion protein (MFP) family [Synechococcus
           sp. JA-2-3B'a(2-13)]
          Length = 340

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 119/361 (32%), Gaps = 48/361 (13%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-IETTDLIDLKKVS 102
           V + G +  E  V+ I       + +  V  G +++ G  L   E   E     +     
Sbjct: 7   VGALGRLEPEGEVLRIAGSPGERLGELLVAEGDRVVAGQVLARLESYAERLAEREYAAAQ 66

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           ++  R  +  E                                       F+       R
Sbjct: 67  LQEARARLQAETR-------------------------------------FSQAQIQEAR 89

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +   +L   + +       E     +RA L+  + +L   + L+++ A+SQ +L+Q+  +
Sbjct: 90  TRLSRLDEPQQM--QIRSQEAVVERIRAELADAEANLARFQELWQEGAISQQELDQRRLL 147

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           V +   +LR    E       +    D  N +      E    L Q Q         L +
Sbjct: 148 VRQRQEDLRA--AEATLSQLRLARERDLLNAQAQVQAAEAGLSLAQAQVQLGSLARNLEL 205

Query: 283 LEKTREQKTILSPIAGTIVYNQSFS-SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
            E   E+  I +P AG +   +  +         + ++++    ++  + A+V    I  
Sbjct: 206 AEARLERTLIRAPRAGQV--LKIHTRPGEVIPAGEGILELGNTDQMMVV-AEVYETDILR 262

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEYYEVILKITDLAFS 399
           V+ G  AT+      +  + + + +  +I    +++            EV +++   + +
Sbjct: 263 VRPGQQATISNRALPETLQGRVERVGLQIGKKDVLNTDPAADVDARVVEVYIRLDPESSA 322

Query: 400 D 400
            
Sbjct: 323 R 323


>gi|271499264|ref|YP_003332289.1| secretion protein HlyD family protein [Dickeya dadantii Ech586]
 gi|270342819|gb|ACZ75584.1| secretion protein HlyD family protein [Dickeya dadantii Ech586]
          Length = 373

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 57/385 (14%), Positives = 128/385 (33%), Gaps = 65/385 (16%)

Query: 37  LLPIEIS-VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
              I  +     GE+++  +         G +    V +G  I +   L   +D +    
Sbjct: 44  FTHISETDARVMGEVISLASR------EDGWVTARPVIDGDVIHKDQLLAQIDDRDARLR 97

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +  ++ ++      I                                  Y  T  +V + 
Sbjct: 98  LAEQEGNLAAADAQIA---------------------------------YSQTQRQVTDL 124

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
              +     + KL    S            S     LS  Q +      L + N  ++  
Sbjct: 125 TTQAALDQARAKLASNDSA----------VSNAGYQLSLAQNNFQRDDQLLKSNLTARKT 174

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
            ++   ++ +   ELRE   ++      +N    +      N L+ + R +E  ++    
Sbjct: 175 WDESHTLLLQRQSELREAEAQRTAQQADLNNALAQ-----RNTLQVLDRQIEMQRQQRIA 229

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             +++  +++    + + SP+ G +V     +  +YAQ  Q +M +V   +  ++ A + 
Sbjct: 230 LQAQVDQIKQEIADRALRSPVDG-VVDRTIVNVGSYAQTGQWIM-LVHDPRNLWVEANIK 287

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVIL 391
              I  V+ G    ++   Y D   K F   + ++    + Q     +   +  + ++  
Sbjct: 288 ETAIGRVRVGQRVDIQVDAYPD---KHFSGHVIRVGDAATNQFALLPSPNPSGNFTKITQ 344

Query: 392 KIT-DLAFSDNNIELRNGFPAEVLF 415
           ++   +A    N  L+ G  AEV  
Sbjct: 345 RVPVRIALDSQNNGLKPGLMAEVSI 369


>gi|300724617|ref|YP_003713942.1| hypothetical protein XNC1_3819 [Xenorhabdus nematophila ATCC 19061]
 gi|297631159|emb|CBJ91850.1| hypothetical protein XNC1_3819 [Xenorhabdus nematophila ATCC 19061]
          Length = 240

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 83/219 (37%), Gaps = 21/219 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             SQ ++ + E  V  +++ + +   +  ++   ++    +A  +  +  +EI+      
Sbjct: 40  YESQQEVLRAEEKVKNTSVNITKTQADIISLETELDTKLHKAEEKIIDTSREIT------ 93

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                 ++S+L       E+  I SPI G +         +  ++   L  ++P+  +  
Sbjct: 94  ------QVSQLLAQLDVIERIEITSPINGRVARLDKM-VGDNIKRGDVLAVVIPNGAMPV 146

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +R ++  +    +K G    +R   Y   R  KF A +  +     +++N++     Y  
Sbjct: 147 VRLQIGAESAGEIKIGQEVKLRVAGYPWRRYGKFTATVVSVSEAAIKRENDM-----YFT 201

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           ++ I +       + L+ G   E         L   ++ 
Sbjct: 202 VVAIPEERV---GLPLKQGMQVEASILTGKKHLYSWLLR 237


>gi|237755751|ref|ZP_04584356.1| multidrug-efflux transporter, MFS family [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692086|gb|EEP61089.1| multidrug-efflux transporter, MFS family [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 374

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/311 (17%), Positives = 107/311 (34%), Gaps = 45/311 (14%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I +   + G  +     +   +D +    ++     I++L+      ++ L  +  +
Sbjct: 53  SGKIIQLYKKEGDAVKADETIAKIDDTDYKIQLENINYEIESLKQQKSQLENQLSRIIQE 112

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +                            N  I+S+             I      L  
Sbjct: 113 NE---------------------------LNQKITSLTTQ---------EIEKKIESLSA 136

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNM 240
           + S + A +   +KD    +NL EK  V +    ++N Q +++      + ++I E    
Sbjct: 137 QKSQVEAQIEKAKKDEERYRNLLEKGLVPKAKYEEINTQLKVLLDQKKAIEKSISELNLS 196

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                E  +    +     KEI   +   +        +   LE   +   + SP  G I
Sbjct: 197 KAKSKETVELVKTQ-GQVSKEIQDQISALENKILALTKQKEDLENQIKYTELKSPYNGII 255

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              +  S  +  +  QP+  IV  +   YI+  +   ++  VK G  A ++   Y D   
Sbjct: 256 AK-KYVSIGDIVKAGQPVYAIVKENS-FYIKVLLEETKLSGVKVGNKAYIKLDAYPD--- 310

Query: 361 KKFKAIIEKID 371
           K F+ ++E ID
Sbjct: 311 KTFEGVVESID 321


>gi|255011748|ref|ZP_05283874.1| putative hemolysin secretion transport system membrane protein
           [Bacteroides fragilis 3_1_12]
 gi|313149585|ref|ZP_07811778.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138352|gb|EFR55712.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 439

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 55/404 (13%), Positives = 130/404 (32%), Gaps = 19/404 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S        +++   +  ++    + +  +G +    V+NG ++     L   E+     
Sbjct: 47  SYWFKYPDVITAEVTVSTQEPPSYVMARSAGRLADLYVQNGQEVKPDMNLGVIENTARAV 106

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   K  ++  +    T +S  +       +L +    R  ++      + ST S+V  
Sbjct: 107 DVFSLKGKMQKWKLEGYTPESGKNLF-----LLSETDRWRLGEIQSAYAGFVSTLSEVVR 161

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                 Y         + +      D +  +  L+    +           L+ + A+  
Sbjct: 162 MKELGYYAKKLQSQKELLATQKKYYDQVRRQYFLIEKEYALAHASYARDSILYHRKAMII 221

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +  Q      +S         +   +   I E  +E  L+      E  +  E N R  
Sbjct: 222 TEFEQSGSRYLQSLQSRESARMQLTQVDMQI-EQSEETLLDLEKQAFEEQQTQEVNLRNA 280

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI-RA 332
            D++  L  L    +   + SP+ G + +   +S + Y +    +  + P  +   +  A
Sbjct: 281 TDQL--LGQLAAWEQHYLLRSPVGGKVTFLNVWSVNQYVESGATVFVVAPKEESLPVGTA 338

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            +  +    VK G    +R  +Y D      +  +  + P+          +  Y V + 
Sbjct: 339 LLPLQGSGKVKAGQRVNLRLNNYPDQEFGYVRGEVRSVSPL-------PTAEGMYVVDIA 391

Query: 393 ITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
           + D   ++    + L             +  L + +I P+   +
Sbjct: 392 LPDGLTTNYGKMLPLTREMKGSAEIITDDLRLLERLIMPLRKIF 435


>gi|298489688|ref|YP_003719865.1| DevB family ABC exporter membrane fusion protein ['Nostoc azollae'
           0708]
 gi|298231606|gb|ADI62742.1| ABC exporter membrane fusion protein, DevB family ['Nostoc azollae'
           0708]
          Length = 479

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/387 (13%), Positives = 134/387 (34%), Gaps = 54/387 (13%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSG-----IIKKFQVENGSQILQGTPLLTFEDI 90
            + P   S+S+ G +     V++I +P SG      +++  V  G ++ QG  +   +  
Sbjct: 53  SMTPTPRSISAIGRLEPRGEVIKIAAPNSGLSAGSRVQQLLVREGQRVQQGQVIAILDSR 112

Query: 91  ETT-DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           ++    ++  K  ++  R ++   ++A          +    +++     +      S  
Sbjct: 113 DSNMAAVEEAKAKLQESRANLGQIRAASPRDIQAQAAIIARLQAQLNGEKEAQQASISRI 172

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +   +    +    +K     +R     +  L    S ++A     + D    + L+ + 
Sbjct: 173 AAELSGEKVAQQAGIKRLEAELRG---QKDGLRATISKVQAEQRDAEVDAGRYEFLYGEG 229

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           A+SQ + +++      +  +LRE     +  L  + +   +A       L  + + L + 
Sbjct: 230 AISQQERDKRRLRAATANQQLRETQASLREALGTLQQQIAQARATQVQTLATLEQQLIEA 289

Query: 270 -----------QRTFADEMSKLTILEK-------------------------TREQKTIL 293
                      Q+   +E ++L+ L                             +   + 
Sbjct: 290 TATREKTVATLQKQIDEERARLSRLLDVRPTDVQMAQAQVTNAMAVIRKAQAELQLSYVK 349

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G I   +  + S     +  + +I   +   ++ A++    I  ++ G  AT+   
Sbjct: 350 APTPGEI--LKVHTKSGEVMSTNGIAEIG-QTDQMFVVAEIPEDSIGKIRVGQRATITSD 406

Query: 354 --HYADIREKKFKAIIEKIDPIISQQD 378
              + D      K  I +I   I ++D
Sbjct: 407 NGAFNDQ----LKGTITEIGRKIGKKD 429


>gi|300774293|ref|ZP_07084157.1| HlyD-family transporter [Chryseobacterium gleum ATCC 35910]
 gi|300506937|gb|EFK38071.1| HlyD-family transporter [Chryseobacterium gleum ATCC 35910]
          Length = 432

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/350 (12%), Positives = 117/350 (33%), Gaps = 22/350 (6%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V +   + +++   +I++  S  I+K  +++  ++ +   L+  +       I   K  +
Sbjct: 55  VPAPIIVTSQNPPEKIEARTSSKIEKIFIKDHQEVKKNDVLMVMQSAANYKDILELKKLV 114

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            ++                K   L+  + S  +   D          +     +      
Sbjct: 115 DSITPDKLYTFPIAQASRFKLGELQGEYNSFAKAFQD----------EALFTRLQPYAPE 164

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                  +    +    L+ + +L        +K+    + LF +  +S  +L  ++   
Sbjct: 165 NLAANQSISEYRVRIATLKQQKNLESIKYDLTKKNFNRSQELFNQGVISAMELENEK--- 221

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT-I 282
               L+ ++N+   K  +  ++E     N   +       +D           + +L   
Sbjct: 222 -IKYLQAQQNLENIKISISQMDEGISNLNKTKSGTAINTEKDRITYSSQTLQLLEQLRKS 280

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQH 341
           L++      ++S   G   + Q F  + + +  +P++ I+P + +    R  V       
Sbjct: 281 LKQWELNYLVISSTDGVASFQQFFGENQFVKVGEPILSILPKNKEQLVGRMSVPTTNSGK 340

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           +  G    ++  +Y        +  ++ I  I  ++ N      YY  ++
Sbjct: 341 ITPGEKVLIKLDNYRFQEYGIIEGKVQNISLIPDEKGN------YYVDVI 384


>gi|186682332|ref|YP_001865528.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186464784|gb|ACC80585.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 459

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 63/443 (14%), Positives = 142/443 (32%), Gaps = 61/443 (13%)

Query: 20  MTLLSIIGIIGLITWSILLP-IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           + LL I G I  + W          +  SG I  E    EI    SG I    V  G+ +
Sbjct: 32  LGLLVIAGGISYLLWHSQQQGAANVLKVSGRI--EGYETEIGVKRSGRIVAIAVREGAAV 89

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  L+  +D        L +  ++     + + +S      +    +E   E  + Q+
Sbjct: 90  KKGQELIKLDD----SNDQLLQEQLRGAEARVASAQSDEQQAISDATQVESGIEQIDSQI 145

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +    YH +               ++  L+ + +     L  + ++    A +   + +
Sbjct: 146 SEAKLNYHQSQGDT--------QGRVQQALSNVATAKAQLLQAQAQTKQALAEVKLAKMN 197

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE---------------------- 236
                 L  + A++Q   +Q +     +   L                            
Sbjct: 198 RDRYAKLVTEGAINQQQFDQAQTTFDTAVATLEARKAAVNAGQEQLRAVAGALTQAKTTS 257

Query: 237 -----QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +   +  +N   D++  +  +   ++     + +   A +   LT +  +++   
Sbjct: 258 FNPGIRNAQIEALNRKKDQSFAQLKSAQAKVKSAHAKVKDALASKQQILTQIADSKKDLN 317

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           ++SP+ G +V  +S            ++ +V      Y+R  +    I  V+ G T  + 
Sbjct: 318 VVSPLDG-VVTARSAEIGTVVSSQTKILTVV-DPNTVYLRGFIPEGDIGKVRLGQTTKIF 375

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNL-----QTQEYYEVILKITDLAFSDNNIELR 406
                   EK     +  +DP  S    N+     + ++   V +++ +     N     
Sbjct: 376 L---DSALEKPLMGKVIAVDPQASFTPENIYFQKDRVRQVVGVRIQLQNPPGCFNPENPY 432

Query: 407 N---------GFPAEVLFTAKNT 420
           +         G PA+     ++ 
Sbjct: 433 SGSDLPCAKIGMPADAEIALQDK 455


>gi|296133446|ref|YP_003640693.1| secretion protein HlyD family protein [Thermincola sp. JR]
 gi|296032024|gb|ADG82792.1| secretion protein HlyD family protein [Thermincola potens JR]
          Length = 342

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 57/405 (14%), Positives = 134/405 (33%), Gaps = 73/405 (18%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEIS-------VSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           R  L+ I+ I+  I+   L  +  +       + +SG +   +  +++ +   G +K+ +
Sbjct: 3   RKPLVFILIIVLFISIGALYKVSGAGKTGDKEIFASGTVEASE--IDLAAEVPGKLKEIK 60

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE G ++  G  L   +                                ++ YD+  K  
Sbjct: 61  VEEGQKVKVGDILAKLD--------------------------------SSVYDLQVKQN 88

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E+          +  S                       ++    N   +    +  + +
Sbjct: 89  EALVAAAKAKARETKSGSRDEL-----------------IKQAEANVQQVAALVNGAKTM 131

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           + + + +   +K L++  A ++  L+  E  +     +L   + +     + ++ L + A
Sbjct: 132 VRNAEANYQRIKALYKTGAATEQQLDNAEAQLQNVKAQLEAYVSQMNAARQQLSLLRNGA 191

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             E  N                A   + L + +  + +  I SP+ G +     F    +
Sbjct: 192 TAETINM----------ADAGVAQAQAALEMAKVQQLKTIITSPVDGVVSSVN-FKEGEF 240

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           A     ++ ++   +  +++  +  K I  +K G  A +    Y D     F   +  I 
Sbjct: 241 AAVGASVVTLL-QPENLWVQVYIPEKDIPKIKLGQKALISIDAYPDQ---SFAGEVSYIS 296

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           P       NLQT+E     +    +   +   + + G PA++   
Sbjct: 297 PEAEFTPKNLQTKEERVKTVFAVKIQIKEGIEKFKPGLPADITIK 341


>gi|220906821|ref|YP_002482132.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 7425]
 gi|219863432|gb|ACL43771.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           7425]
          Length = 504

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/383 (11%), Positives = 116/383 (30%), Gaps = 42/383 (10%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +++G +      + +    +G +++  V+ G ++  G  +   ++      +   +  + 
Sbjct: 72  AANGTVKPA-RTINLSPKTAGYLQQLLVQEGDRVQAGQIVAYMDNSNLQGQLTQARAQLA 130

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
               ++    +                 +R + +     +     +++    + +    +
Sbjct: 131 QQEANLAKLLNG----------------NRPQDIAQATAQLQEAQARLQQLQVGNRPEDI 174

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                ++ S   N    E+     ++LL+   +     + + +K +          +   
Sbjct: 175 AQTQAQLASAQANLRQAEDDLQRNQSLLA---EGAISQQTVIQKRSTRDAAQAAVNQAQA 231

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              L+ R +  E+    + + E   +A        +  + D++  +         L  L+
Sbjct: 232 ALRLQQRGSRSEEIAQAQALVEQRRQALSLLQAGSR--AEDIQVARAQVEAARGGLQTLQ 289

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYIRAKVTP 336
              E   I +P  G +   +     ++                 I+  +    + A +  
Sbjct: 290 TQLEDTVIKAPFTGVVTK-KYADPGSFVTPTTAGSGAEGAASNSILTLAATNQVVAYLDE 348

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
            +I  +K G    +    Y D R         K+  I +Q         + EV + +   
Sbjct: 349 AKIARIKVGQPVNITADAYPDRRFS------GKVSQIAAQATTTQNVTSF-EVKVDLEPT 401

Query: 397 AFSDNNIELRNGFPAEVLFTAKN 419
           A       LR G   E  F    
Sbjct: 402 AQQL----LRAGMNVEAEFQVGQ 420


>gi|290770137|gb|ADD61897.1| putative protein [uncultured organism]
          Length = 436

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/425 (12%), Positives = 139/425 (32%), Gaps = 38/425 (8%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
               L  I+ +I +  W    P   ++++   +  E+    + S  +G +    V+NGS 
Sbjct: 32  GITVLALILLMILVGCWIFRYP--DTLAAEVTLATEEPPAFVLSHATGKLDTLYVKNGSL 89

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +     L    +  +++ +   K  +K         +  ++F           F  R  Q
Sbjct: 90  VSTDADLGVIGNAASSEDVRFLKERMKAWEAQDYDWREGVEF-----------FAGRRWQ 138

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L +    + +  + +  Y   + +  L     ++R          +   L         K
Sbjct: 139 LGELQSAFAAFITSLTEY---ARFMELDYYARKLRFQEKQLGGQRSYLRLAEREYELIDK 195

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D+ + ++++ ++++             +S     +++  ++ +   + +   +      N
Sbjct: 196 DIKLAESMYTRDSILYVRKAMIAAEFEESGSRYLQSLRSKEEVRMSLLQAEMQLVQHEEN 255

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT----ILSPIAGTIVYNQSFSSSNYAQ 313
            L    +  ++ Q    D  + +  L            + SP+ G + +   +S +   +
Sbjct: 256 MLDIRKQAYDEEQSRRTDLKNAIEQLAAQLSAWEHSYLLKSPVRGKVTFMTVWSRNQNVK 315

Query: 314 QSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             + +  I P      + +A +  +    V  G    +R  +Y D      K  +  I P
Sbjct: 316 AGETVFTIQPSDSSRVLGKALLPLQGSGKVHVGQRVHIRLNNYPDQEFGYVKGQVASISP 375

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA------EVLFTAKNTTLAQEI 426
                      +  Y V + + D   ++   +L    P              +  + + +
Sbjct: 376 -------APTEEGMYIVEITLPDGMQTNYGKQL----PVSRELKGTADIILADKNVLERL 424

Query: 427 IHPIT 431
           + P+ 
Sbjct: 425 LAPLR 429


>gi|54307467|ref|YP_128487.1| toxin secretion, membrane fusionprotein [Photobacterium profundum
           SS9]
 gi|46911887|emb|CAG18685.1| hypothetical toxin secretion, membrane fusionprotein
           [Photobacterium profundum SS9]
          Length = 189

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 61/170 (35%), Gaps = 8/170 (4%)

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           E  +R  ++  S+++ L    E  T  +P  G I   Q     +   ++ PL+ I+P + 
Sbjct: 14  ESIKREISNLKSQISRLNNQYEFIT-KAPEVGIITAIQQN-IGSQVNENTPLLSIIPINS 71

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI----ISQQDNNLQ 382
              I   +  +    ++ G    +RF  +   +       I  ID +      +      
Sbjct: 72  SLEIELLLPTRSAGFIQLGDNVNIRFDAFPYQKFGFITGGISNIDKVLILPTDKVLPIKI 131

Query: 383 TQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +  Y +   +   +      +  L+ G  A+     +  +L + +  PI
Sbjct: 132 NEAMYRIRATLNQQSVYAYGESFPLKVGMIADADIILEKRSLLEWLFEPI 181


>gi|218438154|ref|YP_002376483.1| efflux transporter RND family, MFP subunit [Cyanothece sp. PCC
           7424]
 gi|218170882|gb|ACK69615.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           7424]
          Length = 467

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/315 (9%), Positives = 101/315 (32%), Gaps = 28/315 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V +G ++  G  +++ +  +    + + +  + N +  +   ++         
Sbjct: 66  GRVNEVLVSDGDRVQAGQAIVSLDSQDLEADLYIAQARLDNAKSRLGLLEAG-------- 117

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   SR E + +         +++ +    +    +     ++ S        +++
Sbjct: 118 --------SRIEDIAEARANLAQAQARLADAKRGARPEEIAQAEAQLDSAQAEADLAQDR 169

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +     L           +   ++   +   + + ER + +     + +I  Q   +   
Sbjct: 170 AKRYDKLQQEGAVSFDEYQGYLQEARSATAAVTEAERRLAQLKKGRQSDIEAQSAQVEQA 229

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +                  ++ Q +   A+  +++ + +   ++  I +P  G I    
Sbjct: 230 RQNLIRFQNGPR------VEEIAQARAEVAEAQAQVQMAQVELDKTRIKAPFDGVIGDIP 283

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                +Y  +   L  I   + +  +  +V  +  Q+++ G    +    +    +   +
Sbjct: 284 V-KIGDYVGEGDELTTIT-ENNVLEVNLQVPIQYKQNLRLGLPVEI----FNTQNQVITR 337

Query: 365 AIIEKIDPIISQQDN 379
             I  I P +S    
Sbjct: 338 GKISFIAPNVSSNSQ 352


>gi|308069104|ref|YP_003870709.1| membrane-fusion protein [Paenibacillus polymyxa E681]
 gi|305858383|gb|ADM70171.1| Membrane-fusion protein [Paenibacillus polymyxa E681]
          Length = 489

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 56/387 (14%), Positives = 121/387 (31%), Gaps = 62/387 (16%)

Query: 46  SSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            +G +     V     +     +    ++ G  +  G  L   +D +    I   + ++ 
Sbjct: 69  VTGTVQASKEVNINFTNVEGAKLIAVNIKAGDSVKAGQVLARLDDSDARLQIKDAESNVA 128

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             R  ++  K                                   + V    ++      
Sbjct: 129 IARAKLEEAKRGPKT-----------------------NDIELQKTNVLKAQMAIKTAKN 165

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
            M+L           +   +   ++  L   QKD      L + +A +++DL   ++ + 
Sbjct: 166 DMELE----------EAAAQKVAVKVTLDKAQKDYDDQAYLVQNDAAAESDLATAKQNLD 215

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--------SRDLEQNQRTFADE 276
           K+ L++     + K       E  +EA + F   L ++        + +++  Q +    
Sbjct: 216 KAKLDMSNAELQYKKAQNKQTEAIEEAEMGFKTALIQLKAAQSPPEASNIQSAQASLQQA 275

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL---TYIRAK 333
            + L   +    +  + +P  G I+             S     IV ++       + AK
Sbjct: 276 ETALEQKKSVLSKLQVTAPWDGIILKVN-----GDVGTSPTAPFIVMNNSNTGVMKVLAK 330

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    I  +K G  AT+    + D   K+FK  +  + P    + N       Y++    
Sbjct: 331 VNESDIAKLKTGLQATMHSNSFPD---KQFKGEVRFVSPEPVTESNVTT----YKI---- 379

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +L+     I L+ G   +V       
Sbjct: 380 -ELSLDSQKIRLQPGMNMDVSLLLAER 405


>gi|288573276|ref|ZP_06391633.1| secretion protein HlyD family protein [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569017|gb|EFC90574.1| secretion protein HlyD family protein [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 394

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/374 (12%), Positives = 111/374 (29%), Gaps = 55/374 (14%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +K    + G ++ +G  L   +  +                  +  E +  + +   
Sbjct: 53  GGYVKTVYTDEGDRVKKGEVLAKLDTED----------------LKLALETAIGEQIMAA 96

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++ E    SR E++           + +      S  + +     R+      R   E 
Sbjct: 97  ANLEELEKGSRPEEIAAASADVQKAKAALAEMEGGSRVQLIAEAQARLNQAVAARRSAE- 155

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L   + D    K+L++  ++ Q +          +  +L E         + 
Sbjct: 156 ------ATLEMAKADDERFKSLYKSGSIGQREYESYRTAYRNAQEKLHEARASVSAASQQ 209

Query: 244 INELYDEANLEFANYL------KEISRDL----------EQNQRTFADEMSKLTILEKTR 287
           ++ L + +  E            +   DL           Q +       +K  +     
Sbjct: 210 LSLLKEGSRREDVQQAYAALQGAQARYDLVTAGPREEVKAQARARLRASKAKTDMAALKL 269

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           E   + +P  GT++  ++           P   +    +  +IR  V    + H+  G +
Sbjct: 270 EYAELRAPFDGTVL-VKASEEGENVSPGTPAFSLARLDRP-WIRCFVMETDLPHIALGQS 327

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNN 402
           A V          +  +  +  I         + +    +    Y + +++      +++
Sbjct: 328 ALVEIDGLD----RGIEGKVTYISSQAEFTPKTVETRKERVNLMYRIKVRVD-----NDD 378

Query: 403 IELRNGFPAEVLFT 416
             L+ G P  V  T
Sbjct: 379 GVLKIGMPVTVRIT 392


>gi|167839056|ref|ZP_02465833.1| secretion protein, putative [Burkholderia thailandensis MSMB43]
          Length = 419

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 55/421 (13%), Positives = 130/421 (30%), Gaps = 58/421 (13%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
              ++ +  + G  T           + SG ++ +  ++++ +  +G++ +  V  G  +
Sbjct: 41  MGVIVILFFVFGSYT--------RRTTVSGVVVPDTGLIKVYAKQNGVVLRKLVTEGQHV 92

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
           ++G  L T                                      D+        +  L
Sbjct: 93  IRGQALYTIST-----------------------------------DLQTPVTGDTQAAL 117

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +  + +  ++  +                  ++ S+      ++++    R   S     
Sbjct: 118 IHQIQQRKASLQQEVVKTRQLQRADRDTLQAKIISLRRQLAGIDDQIISQRIRTSLATDA 177

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
                 L  K+ +S++   Q+E  +     +L   + ++        +L  EA+ + A+ 
Sbjct: 178 SIRYARLLAKDYISKDQAQQREADLLDQQSKLDSLLRDR----ARTAQLLKEASNDLASL 233

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             +   +L Q  R   D    L   E  RE   I +P  GT                 PL
Sbjct: 234 SLKQQNELSQIDRGIIDVDQSLIESEAKRE-VVIAAPETGTAT-VVIAERGQNTDTVHPL 291

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQ 376
             +VP          V    +  ++ G    +R+  Y   +  ++ A +  I    + S 
Sbjct: 292 AGLVPSDAHWQAYLFVPGAAVGFIRVGDPVLIRYQAYPYQKFGQYAASVISIARTALTSA 351

Query: 377 QDNNLQTQ-----EYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHP 429
           +      Q      YY + + +     +       L+ G   +     +   L + ++ P
Sbjct: 352 ELTTSGAQIGGESTYYRITVALKSQYVTAYGKLQPLQAGMAIQADVLQERRRLYEWVLEP 411

Query: 430 I 430
           +
Sbjct: 412 L 412


>gi|220908283|ref|YP_002483594.1| DevB family ABC exporter membrane fusion protein [Cyanothece sp.
           PCC 7425]
 gi|219864894|gb|ACL45233.1| ABC exporter membrane fusion protein, DevB family [Cyanothece sp.
           PCC 7425]
          Length = 399

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 58/348 (16%), Positives = 124/348 (35%), Gaps = 52/348 (14%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSP------FSGIIKKFQVENGSQILQGTPLLTFEDIE 91
            P   +V++ G +  +  V+ + +P      F   + +  V+ G Q+  G  +   +   
Sbjct: 54  APTIATVTALGRLEPQGEVIHLSAPISCPTCFGNRVGQLLVKEGDQVRVGQIVAILDS-- 111

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                                            D L+ A+E  +E++     K   T + 
Sbjct: 112 --------------------------------RDRLQAAYEQSQEEVRVAEAKLAITRAG 139

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                I++    +     + R     +   E   + L+A L++ + +L   + L ++  +
Sbjct: 140 AKQGEINAQRAEIAFLEAQRRGEIEAQ---EATVARLKAELNNAETELIRYERLAKEGVI 196

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S + L+ +  I+  +   ++E       +         +A        +    D+E +Q 
Sbjct: 197 STSYLDNKRLILTMANQSVQEAKAVLARIQSTTPVKLIQAKANLDRIAEVRPVDIEASQA 256

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS-SSNYAQQSQPLMKIVPHSKLTYI 330
                 + +   +   +Q  + SPIAG I   +  +        +  +M I  ++K  YI
Sbjct: 257 EVNRAKAAMKQAKVNLDQSYVRSPIAGEI--LEIHTRVGEVISTNG-IMDIG-NTKRMYI 312

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            A+V    IQ VK G  A       +D    +    +E+ID  + +Q+
Sbjct: 313 VAQVYESDIQRVKLGQQAK----STSDSISGELIGTVERIDSEVKRQN 356


>gi|325110916|ref|YP_004271984.1| secretion protein HlyD [Planctomyces brasiliensis DSM 5305]
 gi|324971184|gb|ADY61962.1| secretion protein HlyD [Planctomyces brasiliensis DSM 5305]
          Length = 493

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/357 (14%), Positives = 124/357 (34%), Gaps = 21/357 (5%)

Query: 36  ILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKF--QVENGSQILQGTPLLTFEDI 90
             +P + +V+ SG +L    +     I++P  G + ++   +   + + +G  +    D+
Sbjct: 63  AFVPWQQNVAGSGSVLAFAPDQRQQVIEAPIKGRVIRWGENIVENALVEKGQFIAEISDL 122

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +        +  + N +   D     L+         +    S E Q+  +      T +
Sbjct: 123 D-ESYAARLEQQLVNSQLTADAAGRQLEASERALTAAKTIVNSYEAQVRAYEKVKEETIA 181

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
              +  +      ++ +  ++         L+ + + +R L +     L  ++ +  K  
Sbjct: 182 -AQDAYVDMAREKVRAEKQQLLEYEAAIPQLQAEQARVRRLEAEGNVSLQKLQEVERKLQ 240

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS------R 264
            ++  +N+ E  V  +  EL   + E+   +       D A         ++S       
Sbjct: 241 EAEAKVNRAEAYVSSAEAELAGKLRERTAKIEKAQVDIDYAEALLQKANGDVSKAESDIA 300

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
             EQ Q+     +  +      ++ + I++P AG IV  Q    +   ++  P+  IVP 
Sbjct: 301 KSEQEQQKAGKAVLDMETKVARQQNQMIMAPFAGYIVQIQPNMKTAVVKEGDPICTIVPE 360

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPI 373
           +    ++  +       V+ G            ++F  +  +    F   +  +D  
Sbjct: 361 TSDRSVQIWMNGNDAPLVEPGRHVRLQFEGWPALQFSGWPSVAVGTFGGEVVSVDAT 417


>gi|295697290|ref|YP_003590528.1| secretion protein HlyD family protein [Bacillus tusciae DSM 2912]
 gi|295412892|gb|ADG07384.1| secretion protein HlyD family protein [Bacillus tusciae DSM 2912]
          Length = 419

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/389 (13%), Positives = 131/389 (33%), Gaps = 56/389 (14%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E   + I++   G ++   V  G+ + +G  L+  +D                    +
Sbjct: 55  TIEGTEIPIQTEVGGTVQSLPVAEGASVKKGQLLVALDDQSY----------------QL 98

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             + +          + +    SR +++   +     T +       +S     K    +
Sbjct: 99  QVQGAGAGVDAALAALRDAEAGSRAQEIAAAMAAVDQTRALADQSAANS-----KAAGEQ 153

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           + ++  N+  L +     +  L+  Q+ L  ++ L +  A +Q  ++  ++ V ++  ++
Sbjct: 154 VNALIANQSQLMSNLKGAQDTLAYQQQQLARVQALQQAGAATQEQVDAAQQAVNQAQTQV 213

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRD------------------LEQNQRT 272
                + + +   I +  +      + Y   ++ +                  L+Q    
Sbjct: 214 DNLQAQLQGIQAQIRQAQNAQAAAQSGYASALANERSAQAKLDLLKAGATDQHLKQLIAM 273

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                +KL       E+  +L+P  G ++  +        +    L  ++  ++L  +  
Sbjct: 274 KDQADAKLAEARLQLEKTRVLAPADGILLR-RDVEVGQVVKPGATLGMLLKTNELKVV-I 331

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ------QDNNLQTQEY 386
            +    +  VK G  A +R   Y       F   +  I    ++      Q  + + +  
Sbjct: 332 YIPEADLGRVKLGQPAAIRVDAYPGET---FSGRVSVI-ADRAEFTPKNVQTPDERAKMV 387

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + V ++IT          LR G PA+V+ 
Sbjct: 388 FAVTVEITSGLD-----RLRAGMPADVVL 411


>gi|257061038|ref|YP_003138926.1| efflux transporter RND family, MFP subunit [Cyanothece sp. PCC
           8802]
 gi|256591204|gb|ACV02091.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           8802]
          Length = 496

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/315 (11%), Positives = 102/315 (32%), Gaps = 28/315 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V+ G ++ QG  ++T ++ +    +   K  + +    +   ++         
Sbjct: 95  GRISEILVKEGDRVQQGQVIMTLDNSDWQAELLAAKARLASTEARLAELQAG-------- 146

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   +R E + +         +++ N    +    +     ++RS        + +
Sbjct: 147 --------NRVEDIAEARASLREAQARLANAQGGARPEEIAQAEAQLRSAQAEAELAQQR 198

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                 L +         +    +   +Q  ++Q +R + + T   R +I E    +   
Sbjct: 199 VKRYDRLQAEGAISADQYQEYTTEARSTQAAVDQAQRRLSQLTKNRRSDIDELAAAVERE 258

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +          + +      + Q +   A   +++ + E    +  I +PI+G +    
Sbjct: 259 RQNLQRLETGPRSEV------IAQARAEVAQATAQVRMAEVKLSKTQIFAPISGIVGDIP 312

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +    +Y +Q   L  +   + +  +   +  ++   ++ G    +         +    
Sbjct: 313 A-EVGDYVEQGNNLTTLT-ENNVLELNLSIPLEKAPQLRLGLPVEI----LDVSGKAIAT 366

Query: 365 AIIEKIDPIISQQDN 379
             I  I P ++    
Sbjct: 367 GKISFISPNVTSDSQ 381


>gi|121533547|ref|ZP_01665375.1| secretion protein HlyD family protein [Thermosinus carboxydivorans
           Nor1]
 gi|121308106|gb|EAX49020.1| secretion protein HlyD family protein [Thermosinus carboxydivorans
           Nor1]
          Length = 342

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/410 (12%), Positives = 116/410 (28%), Gaps = 85/410 (20%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           + H   +  +    + G+ G   W      +   +    I     +V + +  SG + + 
Sbjct: 10  KKHKIIIALLVFFVVAGLGGGAWWWYYTT-KYVTTDDARI--SGTIVNVSAKISGKVVEL 66

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V+ G Q+  G  +   ++ E        + ++   +   +                   
Sbjct: 67  LVKEGDQVKAGQIIARIDNREILAQKAQAEAALAAAKARYE------------------- 107

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                               +V            +  L + R                 A
Sbjct: 108 --------------------EVVAGARPQEIEQARAALDQAR-----------------A 130

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L + QK+   M+ L++  A+S    +  E                        N   ++
Sbjct: 131 NLDNAQKNYERMEKLYKDGAISAAQRDNAETAYA--------------VAREAYNAASEK 176

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            +L  A   +E    +           + L       +   +++P++G++   ++ +   
Sbjct: 177 LDLTIAGAREET---IRAAAAQVKQAEAALEAANVMADNTVVVAPVSGSV-ALKAVNPGE 232

Query: 311 YAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKKFKAIIE 368
                QP++ IV P     ++ A++   +I  +K G         Y           I  
Sbjct: 233 VVAAGQPIVSIVDPSD--LWVNARIEETKIDRIKIGQKVEYTIDSYPGRVFTGTVYDIGT 290

Query: 369 KIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFT 416
             + + +       +  + +V   + I      D+    R G  A V+  
Sbjct: 291 ATNSVFAIIPTENASGNFTKVTQRIPIKITLPKDSPYIFRPG--ASVIIK 338


>gi|84625006|ref|YP_452378.1| putative membrane fusion protein RaxA [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|84368946|dbj|BAE70104.1| putative membrane fusion protein RaxA [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
          Length = 412

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 51/391 (13%), Positives = 118/391 (30%), Gaps = 52/391 (13%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G ++  D ++ I +P SG++    V  G ++  G  L                   ++ R
Sbjct: 60  GAVVPADGMIAITTPQSGVVANVGVVQGQRVAAGQVLFVL------------AAEHRDDR 107

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                                       +Q    L +     ++      +      +  
Sbjct: 108 GR------------------------PSQQAAAVLAEQQRLTAEAMVQLRAQGRLQQQAA 143

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS- 226
              +  +      ++ +  +LR      Q      +    +  VSQ  +++++  V    
Sbjct: 144 ARALAGLRNRLEQVDAELGVLRHRQQLTQSIEQRYRTALTRGLVSQQFVDEKQADVLDQR 203

Query: 227 --TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              LEL+       + L        +  +     L      L+ ++RT  ++ +      
Sbjct: 204 AHALELQRERLTLADALAQAQAELQQLPVSLRQQLALAGASLQADRRTAIEQAAA----- 258

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
               +  + +P AG +   +         Q Q L  ++P S  T +      +    +  
Sbjct: 259 ---SRWEVRAPRAGRV-ALRPLQRGQAVGQGQRLADLLPTSTATEVVLYAPSRAAGLIGP 314

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIIS--QQDNNLQTQEYYEVILKITDLAFSDNN 402
           G    +RF         +F   + +I  +    + D  L ++  Y + +++   A     
Sbjct: 315 GIPVQLRFDALPYQHYGQFAGRVVEIAAVPEPPRADAPLASEPLYRMRVRLAGDAALRAG 374

Query: 403 IE--LRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               LR G   +     +    +Q    P++
Sbjct: 375 HAAVLRPGMRVQGTLALEWRRFSQWAFEPLS 405


>gi|327403754|ref|YP_004344592.1| secretion protein HlyD family protein [Fluviicola taffensis DSM
           16823]
 gi|327319262|gb|AEA43754.1| secretion protein HlyD family protein [Fluviicola taffensis DSM
           16823]
          Length = 361

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/372 (14%), Positives = 132/372 (35%), Gaps = 63/372 (16%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + N++ +++  +G +K+   E+  ++ +G  L+T +D+E    +   + +++N + ++  
Sbjct: 47  DANIIPVRTSITGYVKEVLFEDNQEVKKGQLLVTIDDVEYKAKVAQAEAALENAKANLGA 106

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            KS     N        + E+ +E +                                  
Sbjct: 107 MKSNAMASNQSASAAMFSTETTQETI---------------------------------- 132

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                        +  +A L+  ++D    KN+F   A +Q +L         S  EL  
Sbjct: 133 -------------NSAKAKLNKAKEDNKRTKNMFAAKAATQAEL-------DNSDAELEV 172

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                 + L+ +     ++    +  L ++S  +   +       ++L + +   +  TI
Sbjct: 173 AQATYDSALKQLKVSQSQSAGVKSQALGQVS-MISLAEAMIRQREAELKLAQTQLDYATI 231

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +   +S     Y    Q +   +  +   ++ A     Q+++++ G    ++ 
Sbjct: 232 EAPCDGIVSK-RSIEVGQYVSTGQSVCSAI-DNTSLWVSANFKETQLENMRIGQPVEIKI 289

Query: 353 PHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELR- 406
             Y  I+   K  + +       S    +  T  + +++    +KIT    +   +++  
Sbjct: 290 DAYPHIKLSGKLNSFVGATGAKFSLLPPDNATGNFVKIVQRVPVKITIDHLTKEELKILF 349

Query: 407 NGFPAEVLFTAK 418
            G  A V    K
Sbjct: 350 PGLSAYVSVKVK 361


>gi|332706759|ref|ZP_08426820.1| RND family efflux transporter, MFP subunit [Lyngbya majuscula 3L]
 gi|332354643|gb|EGJ34122.1| RND family efflux transporter, MFP subunit [Lyngbya majuscula 3L]
          Length = 492

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 58/392 (14%), Positives = 134/392 (34%), Gaps = 48/392 (12%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E  ++ SG +        ++SP  G +++  V  G+ +  G  L+   D E    +  +
Sbjct: 61  LEEVINESGTMELGGQ-QTLQSPVDGTVEQILVGVGNSVALGQTLVILRDPERQTALAQQ 119

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++ I+     ++  +      + K  V +K                              
Sbjct: 120 QLEIQKQELKLERNRQKTIEASQKLTVAQKEL---------------------------- 151

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             ++L  +   MR   L       K   L A L++ Q++L   + L +K  + +N+L QQ
Sbjct: 152 --QALAFQEVEMRKQELQLARNREKVLELTAKLNAAQRELQESEVLLQKGFIPENELQQQ 209

Query: 220 ERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           +  +     +LR+    +      L+ + +       E +N +      L+  Q   + +
Sbjct: 210 KDQILTIKSQLRDAELAVDTTVLELQSLQQQRQSKQRELSNQVLTAEAQLQDAQSQVSTD 269

Query: 277 MSKLTIL-------EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLT 328
             +L  L       E+  ++  + + + GT++           +    L+ +  P     
Sbjct: 270 THELERLRLERKKIEEEIQKNLVKATLNGTVLEINV-KVGEVVKLGDALLTLGNPSQG-- 326

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            ++ +++P     V+    A VR         K F   ++ +  + +  +NN +  +   
Sbjct: 327 IVKLQLSPLDAVRVQVNQIARVRVIG---PNAKSFTGRVQSVSKLATTSNNNGEKGKSSG 383

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                  +     +  L  G   +V       
Sbjct: 384 QATVTATIKLDRPSKTLIPGSKLDVEIIVAAR 415


>gi|119510920|ref|ZP_01630043.1| hypothetical protein N9414_20560 [Nodularia spumigena CCY9414]
 gi|119464448|gb|EAW45362.1| hypothetical protein N9414_20560 [Nodularia spumigena CCY9414]
          Length = 514

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/386 (13%), Positives = 123/386 (31%), Gaps = 73/386 (18%)

Query: 39  PIEISVSSSGEIL--NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           P+ +S+ S+G+I                  + +  VE G+ + +G P+      E   L 
Sbjct: 69  PLAVSIKSTGQIETLPSQEAQVTTPIAGAKVVELLVEPGTVVKRGQPVAVVSSPELVSL- 127

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
                        +++E                                     +    G
Sbjct: 128 ------------RVESE-------------------------------------EKLAQG 138

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            + + ++        ++ +  +     + +  +  ++  Q+  +  + L +  A+ Q + 
Sbjct: 139 RAELQQAQADLKLAQQNYHRFQEISAAEIAEAQTQIAFAQEKYSKDQELADAGALPQRNA 198

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +  + ++  +L      +  +         +A +E A     +S ++ + +      
Sbjct: 199 LESQTQLAQAKSQLATANSSRDVIAAQNQVQRAQAAVEVAKSRVSLSNNIYETR------ 252

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
           + +L I    +   TI +PI+GT+   +     ++      LM IV +    +  A +  
Sbjct: 253 LQQLGIRGNAKGLVTITAPISGTVANREVTLGQSFQDAGDKLMTIV-NDSRVFATANIYE 311

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           K ++ V+ G    VR     D     F   I  I  ++  Q             +     
Sbjct: 312 KDLERVRSGQQILVRIASLPDRT---FTGRITVIGSVVGGQT-----------RVIPVKA 357

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTL 422
             S+    L+ G  AE+      T+ 
Sbjct: 358 EISNPGGILKPGMFAELEVLTDETSA 383


>gi|168699822|ref|ZP_02732099.1| hypothetical protein GobsU_09878 [Gemmata obscuriglobus UQM 2246]
          Length = 546

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/404 (13%), Positives = 125/404 (30%), Gaps = 55/404 (13%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSG-IIKKFQVENGSQILQGTPLLTFEDIETT 93
           + +  +EI+V+  GE+ + + V  I     G  I       G+ + +G  +   +     
Sbjct: 83  ATVGDLEIAVADKGELESSEAVQVICEVEGGGKITTIL-PEGTVVKRGDVVARLDTDALQ 141

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             I+ ++V  +     +    S L+                         + +    ++ 
Sbjct: 142 KAINEQEVKWEQAEGKVKAAISELEV------------------------QRNKAEGEIA 177

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA--- 210
              ++ V   +  +              +    L +  L   + +L   + + +K     
Sbjct: 178 KAELAHVLADIDRESFLDAEYKGELDKKKGALELAKKELKEAEDNLEFTRGMVKKGFAQL 237

Query: 211 --VSQNDLNQQERIVYKSTLEL----------RENIHEQKNMLRHINELYDEANLEFANY 258
             +   +L  +++       E           R    E +   +      D      A  
Sbjct: 238 EQIRIVELTHEQKRYAVQQGEADLLLFTKYTKRRKTTELEAKAKDAVRDLDRTKKSQAAA 297

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQS-- 315
            ++ + ++   ++T   E  +   L     +  + +P  G ++Y +     S   +    
Sbjct: 298 TEKAASEVTAARKTADLEKRQFERLRDQLGKCEVKAPAPGIVIYFKRPWDESARIRPGGQ 357

Query: 316 ----QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               QP+  + P      ++ KV    ++ VK G   T++         +  +  +  + 
Sbjct: 358 VFFQQPIFTL-PDLSQMKVKMKVHETVVKKVKAGLGCTMKIDALP---GQVLRGKVMSVA 413

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +    D      + YE  + I D+        LR G  AEV  
Sbjct: 414 TLAQGDDWRGGGVKEYETTISIEDM---PTEAGLRPGMSAEVKI 454


>gi|256819931|ref|YP_003141210.1| secretion protein HlyD family protein [Capnocytophaga ochracea DSM
           7271]
 gi|256581514|gb|ACU92649.1| secretion protein HlyD family protein [Capnocytophaga ochracea DSM
           7271]
          Length = 359

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 66/421 (15%), Positives = 128/421 (30%), Gaps = 78/421 (18%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG-IIKKF 70
            HP  L  + LL+ + +           + ISVS+ G I +     E+ +P SG ++K F
Sbjct: 2   KHPIYLSILLLLTTVVVALPFI-----KVPISVSARGVIRSNFEDTELTAPVSGRVVKCF 56

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
             +N   + +G  LL            L     ++    +    + +   N         
Sbjct: 57  LSQNNQNVQKGDTLLIITTELLNTQQQLVNTQQQDYNAQLQDLTALVSHKNTPLQTP--- 113

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                                               +  + R+ +L R+        L+A
Sbjct: 114 ------------------------------------QYAQERAAFLERIG------QLQA 131

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            LS  +K+L     LF K+ +++                      E + +     EL  +
Sbjct: 132 QLSLAKKELDRANQLFSKDVIAK---------------------AEYEKIYYRHEELLRQ 170

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                     +      + +R      S    L + ++   +++PI GTI   +     N
Sbjct: 171 VQSTQQQQYAQWQAQRTEVERKLQSLQSDEKRLSQEQQNYVVIAPITGTIAQYKGIRQGN 230

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +  Q Q +  I P          V+PK I  +        +   Y   +       +++I
Sbjct: 231 FLSQGQTIATISPEQN-LIAECLVSPKDIGFIHPSQNVRFQIDTYNYNQWGLLNGSVKEI 289

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEII 427
           D  +   +   +    +++   I+       N     +  G      F   N TL Q + 
Sbjct: 290 DKNLVVNEQTGEGL--FKIRCGISKGYLQLKNGYRGNINKGMSFTARFYLTNRTLWQLLF 347

Query: 428 H 428
            
Sbjct: 348 D 348


>gi|320159521|ref|YP_004172745.1| secretion protein HlyD family protein [Anaerolinea thermophila
           UNI-1]
 gi|319993374|dbj|BAJ62145.1| secretion protein HlyD family protein [Anaerolinea thermophila
           UNI-1]
          Length = 388

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/408 (12%), Positives = 134/408 (32%), Gaps = 39/408 (9%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIE---------ISVSSSGEILNEDNVVEIKSPFSG 65
           + L  + +L + G    + W+   P             V +  +++  D+         G
Sbjct: 6   SILSAVIVLWLAGC-SALPWAQSAPQATPVPTVSENGGVLAEAKLVPNDSASLF-FLSGG 63

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + +  V  G Q+  G  L               + ++   +  +   + ALD LN K  
Sbjct: 64  TLAEVLVSEGEQVQAGQVLARL------SESAQAQATLAQAKAELLAAQQALDTLNKKAA 117

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +  +       +      +      ++           L+ +   ++    +R +   + 
Sbjct: 118 LTAEQARVAMLEAEREAVQAWQAFDRLDTRATRDRIDDLRERAADLQQELQDREETLGRY 177

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           S L A   + ++    ++        ++   N   R + + T E+   +   +  L +  
Sbjct: 178 SNLAADNPTRKRAEDDVEQ-------ARLRYNDASRELNQLTNEVE--LARARWDLANQR 228

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                   E    LK    +L   Q       + +   ++   +  + +P  GT+V  + 
Sbjct: 229 LEDARRTYEARQELKPDPDELALAQARVEAAQAAVAAAKEALSRLELRAPFDGTVVEVR- 287

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           +S       +Q ++ +   S+       ++ K +  +K G    +      ++     K 
Sbjct: 288 YSPGESVAPAQTVLVLADLSEWYAETVDLSEKDVVKIKAGQAVEIIPDALPEVT---LKG 344

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            +E+I     ++  ++     Y V ++       +++  LR G   +V
Sbjct: 345 EVERIALFPLERGGDVV----YRVRVR-----LLESDERLRWGMTVDV 383


>gi|325275795|ref|ZP_08141664.1| secretion protein HlyD family protein [Pseudomonas sp. TJI-51]
 gi|324099066|gb|EGB97043.1| secretion protein HlyD family protein [Pseudomonas sp. TJI-51]
          Length = 351

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 111/317 (35%), Gaps = 28/317 (8%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I    S L    +   V +    ++ + L+           +     +++       
Sbjct: 43  QGEITRVSSQLGARIDSVPVEDNQHVNQGDLLVRLEAADFELALERARAALATREAEYAQ 102

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             +R+          + + +  +A     + DL+  + L +   VS+  +       + +
Sbjct: 103 AQSRLTQQSSLIAAGQAQVAANQATFDRSRLDLSRAEKLRKPGFVSEERVTTLSADSHVA 162

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             ++ +   + ++  + ++ L               + +L++     A+  + L   E  
Sbjct: 163 GSQVDKARADLQSQRQQVSAL---------------NAELKRLDAQIANARADLAQAELN 207

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I +PI+GTI   +S  +    Q    L+ IVP     +++A     QI H++ G 
Sbjct: 208 LTRCEIRAPISGTI-GQRSARNGQVVQAGAYLLSIVPDED-IWVQANFKETQIGHMQPGQ 265

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAF 398
            A + F  Y D      +  ++ +      Q      +  T  + +V+    +K+T  A 
Sbjct: 266 RAELLFDSYPDT---PIEGRVDSLFAASGAQFSLLPPDNATGNFTKVVQRIPVKLTFRAD 322

Query: 399 SDNNIELRNGFPAEVLF 415
           +  +  +R G       
Sbjct: 323 NPLHGRIRPGMSVTATV 339


>gi|17229514|ref|NP_486062.1| hypothetical protein all2022 [Nostoc sp. PCC 7120]
 gi|17131113|dbj|BAB73721.1| all2022 [Nostoc sp. PCC 7120]
          Length = 455

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 50/369 (13%), Positives = 125/369 (33%), Gaps = 18/369 (4%)

Query: 15  ASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           +    + L+++  I+G+   WSI   I I+V   G ++   NVV ++S  +G I    V+
Sbjct: 5   SPKSWLPLVALGSIVGVAFIWSIYGSIPITVEGRGVLIYPSNVVPLQSKSAGQIMALNVK 64

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFLNNKYDVLEKA 130
            G  I +G  L T +  E    +  ++  +  L          +        +    ++ 
Sbjct: 65  VGDVIKKGQVLATIDQAELRKQLQQQRGKLTQLESQDKAVGSLQGRRLEQEERSQQQQRQ 124

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           +  +    L+ +     T             +    +   + +++L R+ +  +      
Sbjct: 125 YLRQRILELEAITPLLKTKGNTSVDQQRQGLQQRLQQAQALTAVFLRRMKIRQELFQKEG 184

Query: 191 LLSSHQKDLTMMKNL--FEKNAVSQNDLNQQERIVYKSTLELREN---IHEQKNMLRHIN 245
            +S  +      + L   EK A  Q  L + +    +   + REN   + + ++ L+ ++
Sbjct: 185 AISGDEALKAEQEYLQNLEKIADIQAQLKELDVKETQQEKDYRENLTLVADLQSQLKQLD 244

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                   +    +   ++++++ +R       +L+      +   I+S  +G I+    
Sbjct: 245 SQQASVAQQDLENVTARNKEIQEVKREIGSLELQLS------DNSQIISQHSGRILEITL 298

Query: 306 FSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            +          L  I   +              + + ++ G +  +        R    
Sbjct: 299 -TPGQVVNAGTRLATIEAENPQSKLVGVTYFPVAEGKKIQPGMSIQITPQTVKRERFGGI 357

Query: 364 KAIIEKIDP 372
              +  I  
Sbjct: 358 VGNVTSISR 366


>gi|194097752|ref|YP_002000793.1| putative secretion protein [Neisseria gonorrhoeae NCCP11945]
 gi|193933042|gb|ACF28866.1| putative secretion protein [Neisseria gonorrhoeae NCCP11945]
          Length = 337

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 55/377 (14%), Positives = 112/377 (29%), Gaps = 55/377 (14%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           E+G ++  G  L             +++         + TE      L            
Sbjct: 2   EDGEKVKAGDKLFALSTSRFGAGGSVQQ--------QLKTEAVLKKTLA----------- 42

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              EQ L  L   H   ++     +  +                 +L +  +    +  +
Sbjct: 43  ---EQELGRLKLIHENETRSLKATVERLENQ--------------KLHISQQIDGQKRRI 85

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              ++ L   + L   +AVS+ +    E  + +   +L     E+  +L+ I       N
Sbjct: 86  RLAEEMLRKYRFLSANDAVSKQETMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ----N 141

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           L  A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +       
Sbjct: 142 LTLASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQV 199

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             S+ L+ IVP     Y    +       +K      +R+  Y   +       +  +  
Sbjct: 200 DPSKLLLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVAK 259

Query: 373 IISQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKN 419
               +                 +  Y V +K      +       L+ G   E     + 
Sbjct: 260 TALGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHEK 319

Query: 420 TTLAQEIIHPITDNWPK 436
             L + ++ PI     +
Sbjct: 320 RRLYEWVLEPIYSMSGR 336


>gi|258593887|emb|CBE70228.1| Efflux transporter, RND family, MFP subunit precursor [NC10
           bacterium 'Dutch sediment']
          Length = 479

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 56/424 (13%), Positives = 125/424 (29%), Gaps = 85/424 (20%)

Query: 14  PASLKRMTLLSIIGIIGLITWSIL---LPIE--ISVSSSGEILNE-------DNVVEIK- 60
           P +   + ++ +I + GL  W+ L     +E   +    G+I          + VV ++ 
Sbjct: 4   PKAKVVLVIVGLIALSGLGGWAYLRGQSRVEYRTATVGRGDIEATISATGNPNAVVTVQV 63

Query: 61  -SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
            S  SG IK+   +  +++ +G  +   +       ++  K ++ N R  +   ++ L  
Sbjct: 64  GSQVSGNIKELHADFNTKVKKGQLVARIDPEIFEAKVNQAKGNLDNARAAVLNARAML-- 121

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                                          +     I++   SL++         +  L
Sbjct: 122 -------------------------------QKTEADIANAKASLEVAKANAAKAKVAVL 150

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           D + K              L    NLF++  +S  + +  +     +   L     + + 
Sbjct: 151 DAQIK--------------LRSRINLFKEGGISAEERDSAQATYDSNIAALDAAKAQDQA 196

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               +     +  +  A         +           + L   +   +   I +P+ GT
Sbjct: 197 AGYSLRAAQAQHEVTMA--------QIAAADAQVKQNEAALKQAQVDLDHTYIRAPVDGT 248

Query: 300 IVYNQSFSSSNYAQQ---SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +V                +  L  I        +   V    +  ++ G   T     + 
Sbjct: 249 VVSRNVD-VGQTVAASFSAPTLFLIAQDLTKMQVDTNVDEADVGRIRVGQDTTFTVDAFP 307

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 FK  + +I     Q   N+Q    Y  ++       ++ + +L  G  A V   
Sbjct: 308 GEI---FKGKVVQI----RQAPMNVQNVITYNAVI-----GVANPDFKLFPGMTANVRIL 355

Query: 417 AKNT 420
               
Sbjct: 356 VDRR 359


>gi|222530259|ref|YP_002574141.1| RND family efflux transporter MFP subunit [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222457106|gb|ACM61368.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 663

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 66/405 (16%), Positives = 133/405 (32%), Gaps = 37/405 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I +SV+ SG I      V++ S  S  I     ++G  + +G  +   E  +  + ID  
Sbjct: 68  ITVSVTGSGPIE-SAQSVDLTSTVSSTITNVFFKDGDSVKKGDVIFELESQDAKNKIDSI 126

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDV------LEKAFESREEQLLDFLGKYHSTCSKVF 153
           K  I ++   I   + ++  L     +      L      R  + L  L    ++  KV 
Sbjct: 127 KSQIDDVNSSIADVQESIKNLVITAPISGYVKNLNAQEGDRISKGLSVLTIIDTSKLKVT 186

Query: 154 NYGISSVYR-------------SLKMKLTRMRSIYLNRL---DLENKSSLLRALLSSHQK 197
               ++++               +   +    S   N     D   K   +   +S+   
Sbjct: 187 LPFSAALFDKVKIGAPAVVYIPDISQSIQGTVSYLGNTTYTNDYGGKVFDVEITISNPGA 246

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LRENI-HEQKNMLRHINELYDEANLEF 255
               MK   E    ++  L+ Q+  +     E ++  +  E   +    N+  ++  +  
Sbjct: 247 LKEGMKASAEIKVGAEVYLSTQDATLEYVDKENVKAKVDGEVSEIFARNNQFVEKGAVLL 306

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                ++S+ L+  Q    +   +L   E   E   I +P  G +     F   +  +  
Sbjct: 307 KLSNDDLSKQLKNYQTQLKNLQDQLKDAEDNLENYYIKAPFDGVVTNIN-FKKGDNIKAG 365

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + L   V  +K    R  +    I  +K G    +      + +       + KI P+  
Sbjct: 366 EVLAT-VFDNKNLVFRVDIDELDIAKIKVGQKVNITVDALPETQTNPLTGKVAKI-PLEG 423

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              N + T   Y V + I     +  N+++  G  A         
Sbjct: 424 TTQNGVTT---YSVTISID----NPKNLKI--GMNANAEIIVDQK 459



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 64/173 (36%), Gaps = 16/173 (9%)

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++    ++  +    D  S +  ++++ +   I +PI+G +    +    +   +   ++
Sbjct: 117 QDAKNKIDSIKSQIDDVNSSIADVQESIKNLVITAPISGYVKNLNA-QEGDRISKGLSVL 175

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I+  +    +    +      VK G  A V  P  +   +         +  + +    
Sbjct: 176 TII-DTSKLKVTLPFSAALFDKVKIGAPAVVYIPDISQSIQG-------TVSYLGNTTYT 227

Query: 380 NLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFTAKNTTLAQEIIH 428
           N    + ++V + I++       +    E++ G  AEV  + ++ T  + +  
Sbjct: 228 NDYGGKVFDVEITISNPGALKEGMKASAEIKVG--AEVYLSTQDAT-LEYVDK 277


>gi|17228998|ref|NP_485546.1| hypothetical protein alr1505 [Nostoc sp. PCC 7120]
 gi|17135326|dbj|BAB77871.1| alr1505 [Nostoc sp. PCC 7120]
          Length = 504

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 131/391 (33%), Gaps = 45/391 (11%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             + I+VS++G +  E +V  +    SGI+K+  V+ G  + QG  L   +D      + 
Sbjct: 74  SNLPITVSANGTVQPERSV-NVSPKTSGILKQLLVKEGDSVQQGQILAYMDDSNLQGQLH 132

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   +                 +V +    +R E +     +     + +     
Sbjct: 133 QAQGNLAAAQA----------------NVQKLVNGNRAEDIATAQAQLAEQEANLQKLLN 176

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            +  + +     +++         E+     + L SS    L  +         +Q  + 
Sbjct: 177 GNRLQEVAQAQAQLKDAQYALRQAEDDLQRNQKLYSSGAIALQSLNTFGTSRDRAQTQVK 236

Query: 218 QQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           Q E+         R E+I + + +++   E    +             D++Q +   A  
Sbjct: 237 QAEQATSLVRSGTRPEDITQARAVVKQKQEALSLSQAGSR------PEDIQQARAQVASA 290

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT-------- 328
              + I++       I +P +G +   +     ++   +     +   S  +        
Sbjct: 291 QGAVQIIQANLNDMVIRAPFSGIVAR-KFADPGSFVTPTTAGSAVSSASSSSILALASTN 349

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            I A V    I  ++ G  AT++   Y     K F   + +I    + Q + +Q    +E
Sbjct: 350 QIVADVAEANIAQIRMGIVATIQADAY---TGKTFTGEVTQI----ATQSSVVQNVTSFE 402

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           V   + D         LR+G    V F A  
Sbjct: 403 VKTSVPDPQGL-----LRSGMNVTVDFKAGE 428


>gi|158424829|ref|YP_001526121.1| putative membrane-fusion protein [Azorhizobium caulinodans ORS 571]
 gi|158331718|dbj|BAF89203.1| putative membrane-fusion protein [Azorhizobium caulinodans ORS 571]
          Length = 443

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 132/375 (35%), Gaps = 63/375 (16%)

Query: 15  ASLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           + +  + L   I ++ G + WSIL    I V+ +G +     V+ + SP +G +   +V 
Sbjct: 45  SPMGWLVLAVFICVVLGGLAWSILGTAPIKVAGTGVLQGTGGVLLVSSPGNGPVSDLKVA 104

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G+Q+  G  +    D     ++D +  +I      +  E+  L            AF++
Sbjct: 105 VGAQVHAGEIVAVLSD----PVLDARAQTITARLAQLQEEQRKL-----------AAFQA 149

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           RE+++                               R R+    +  LEN     R   +
Sbjct: 150 REKEV-------------------------------RARADAQRKEALENTIRQAREREA 178

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           +  + L   ++L  +   +++ +   E    ++  +  +  +    +    +E    A  
Sbjct: 179 ALTQVLANQRDLLSRGLATRDRVLITENDREQARRDAADAANAINALGVEADERGIRAE- 237

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                + ++S  L Q+++  A+  ++         +  + +P  G I+     +  +   
Sbjct: 238 ---RDMLDLSARLSQSRQELAEVEAERAA------RTLVRAPGDGRIIELSV-ALGDRVS 287

Query: 314 QSQPLMKIVPH-----SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               LM++VP       +       V   + + V+ G    V        R+   +  + 
Sbjct: 288 AGSSLMRLVPEVRGAAGEGLVGILYVPSSEGKKVRPGMPVQVVPSTVNMERDGFIRGEVI 347

Query: 369 KIDPIISQQDNNLQT 383
           ++    + ++   QT
Sbjct: 348 RVSETPATREAVQQT 362


>gi|220929674|ref|YP_002506583.1| hypothetical protein Ccel_2264 [Clostridium cellulolyticum H10]
 gi|220000002|gb|ACL76603.1| hypothetical protein Ccel_2264 [Clostridium cellulolyticum H10]
          Length = 627

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 51/346 (14%), Positives = 111/346 (32%), Gaps = 19/346 (5%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHS 147
            +  + ++L K + +  +   +   S       K ++ +   + +  E +   +  K+ S
Sbjct: 288 TDYENRLNLLKNTFEEKKRIYEAYLSLSGVAITKSELEDARIQMQNTEGEYTAYKSKFLS 347

Query: 148 TCSK-VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              K + N  IS   +  K+  TR +   L+  + + ++SL              + NL 
Sbjct: 348 ELEKNIKNIEISIKEKESKVSGTRDKQGLLDLNEKDRQNSLKALYFQERNDAAQAIDNLA 407

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +K       +   ++       EL+   +   N    +N  Y          +      +
Sbjct: 408 DK-------VGTMKQKNVLCDAELKTIANADGNNEDSLN--YSLVERTKVQEIVAADEKI 458

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH-S 325
           +    +       +  LE       + + + G +         +   +   ++ I+P   
Sbjct: 459 KAVTDSITGVKENIKKLELCISNAIVKASVNGIVNIITEIYPGDLVAEGAEILTIIPDTG 518

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               ++  V+ K I  +  G T    F         +    I  I        NN + Q 
Sbjct: 519 SAFKMQMTVSNKDIGEIHTGDTVKYSFAALPYREYGQAAGKIINISKDAV---NNAEGQS 575

Query: 386 YY--EVILKITDLAF-SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           YY  E  + +T L   S    E++ G   E     K  +  +  + 
Sbjct: 576 YYIVEATVPVTKLTSNSGRQGEIKAGMICEANVITKQKSFLRYFLE 621



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 91/268 (33%), Gaps = 25/268 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +    P     +    +IG +I  + W+     EI V +SG++  E  +  +++   G
Sbjct: 17  REMYHAKPHPFVWVFTYVLIGLVIAAVIWAAFGKKEIVVKASGQVRPESGISTVRNIVGG 76

Query: 66  IIKKFQVENGSQILQGTPL-------LTFEDIETTDLIDLKKVSIKNLRCH---IDTEKS 115
            ++      G  +  G  L       L  E    T  +   +  ++N R +   I TE++
Sbjct: 77  ELESTNYRQGMAVKAGDILYIIKHDNLLLERESATKKLKKLEKELENHRIYRNCIITEEN 136

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR--SLKMKLTRMRS 173
             D +N         +E   + L+D       T  K        +     L   L  +  
Sbjct: 137 NFDSINEPVY-----YEKVRKLLMDIEFSQTDTAYKTTRLNEEKLLNDTQLNRNLKEIEF 191

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +      L+N  + L +     ++     K  +EK  + + ++   +R   +   ++R N
Sbjct: 192 LKKYIKSLDNNKNYLISGDELEKQY----KQKYEKYLIEKTEI---QRKYDRQADDIRSN 244

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKE 261
             E         +    A       + E
Sbjct: 245 SPEAMKQSIEEEKSQLRAYQTLKKSVSE 272


>gi|146297445|ref|YP_001181216.1| RND family efflux transporter MFP subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145411021|gb|ABP68025.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 665

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 68/401 (16%), Positives = 134/401 (33%), Gaps = 39/401 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I ++VS SG I      V++ S  S  I K    +G  + +G  +   E  +  D ID  
Sbjct: 68  ITVTVSGSGPIE-SAQSVDLTSTVSSTITKVNFNDGDTVKKGDIIFELESQDAKDKIDSI 126

Query: 100 KVSIKNLRCHIDTEKSAL---------------------DFLNNKYDVLEKAFESREEQL 138
           K  I ++   I   + ++                     D ++    +L     S+ +  
Sbjct: 127 KSQIDDVNSSIADIQESIKNLVITAPISGYVKNLNAQEGDRISKGSTILTIIDTSKLKVT 186

Query: 139 LDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           L F                 I  + +S++  ++ + +      D   K   +   +S+  
Sbjct: 187 LPFSAALFGKVKIGAPAVVYIPDISQSIQGTVSYLGNTTYTN-DYGGKVFDVEITISNPG 245

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LRENI-HEQKNMLRHINELYDEANLE 254
                MK   E  A +   L+ Q+  +     E +R  +  E + +    N+  ++  + 
Sbjct: 246 ALQEGMKASAEIKAGNDVYLSTQDSTLEYVDKENVRAKVDGEVEEIFARNNQFVEKGTVL 305

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                 ++S+ L+  Q    +   +L   E   E   I +P  G +     F   +  + 
Sbjct: 306 LKLSNDDLSKQLKNYQTQLKNLQEQLKEAESNLENYYIKAPFDGVVTNIN-FKKGDSIKP 364

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + L   V  +K    R  +    I  +K G    +        +       + KI P+ 
Sbjct: 365 GETLAT-VFDNKNLVFRVDIDELDIAKIKVGQKVNITVDALPQTQTDALTGKVAKI-PLE 422

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               N + T   Y V + I     S  ++++  G  A    
Sbjct: 423 GTTQNGVTT---YSVTISID----SPKDLKI--GMNANAEI 454



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 53/159 (33%), Gaps = 15/159 (9%)

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++    ++  +    D  S +  ++++ +   I +PI+G +    +    +   +   ++
Sbjct: 117 QDAKDKIDSIKSQIDDVNSSIADIQESIKNLVITAPISGYVKNLNA-QEGDRISKGSTIL 175

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I+  +    +    +      VK G  A V  P  +   +         +  + +    
Sbjct: 176 TII-DTSKLKVTLPFSAALFGKVKIGAPAVVYIPDISQSIQG-------TVSYLGNTTYT 227

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           N    + ++V + I++            G  A     A 
Sbjct: 228 NDYGGKVFDVEITISNPGALQE------GMKASAEIKAG 260


>gi|317481008|ref|ZP_07940088.1| hypothetical protein HMPREF1007_03207 [Bacteroides sp. 4_1_36]
 gi|316902901|gb|EFV24775.1| hypothetical protein HMPREF1007_03207 [Bacteroides sp. 4_1_36]
          Length = 436

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/425 (12%), Positives = 139/425 (32%), Gaps = 38/425 (8%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
               L  I+ +I +  W    P   ++++   +  E+    + S  +G +    V+NGS 
Sbjct: 32  GITVLALILLMILVGCWIFRYP--DTLAAEVTLATEEPPAFVLSHATGKLDTLYVKNGSL 89

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +     L    +  +++ +   K  +K         +  ++F           F  R  Q
Sbjct: 90  VSTDADLGVIGNAASSEDVRFLKERMKAWEAQDYDWREGVEF-----------FAGRRWQ 138

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L +    + +  + +  Y   + +  L     ++R          +   L         K
Sbjct: 139 LGELQSAFAAFITSLTEY---ARFMELDYYARKLRFQEKQLGGQRSYLRLAEREYELIDK 195

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D+ + ++++ ++++             +S     +++  ++ +   + +   +      N
Sbjct: 196 DIKLAESMYIRDSILYVRKAMIAAEFEESGSRYLQSLRSKEEVRMSLLQAEMQLVQHEEN 255

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT----ILSPIAGTIVYNQSFSSSNYAQ 313
            L    +  ++ Q    D  + +  L            + SP+ G + +   +S +   +
Sbjct: 256 MLDIRKQAYDEEQSRRTDLKNAIGQLAAQLSAWEHSYLLKSPVRGKVTFMTVWSRNQNVK 315

Query: 314 QSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             + +  I P      + +A +  +    V  G    +R  +Y D      K  +  I P
Sbjct: 316 AGETVFTIQPSDSSRVLGKALLPLQGSGKVHVGQRVHIRLNNYPDQEFGYVKGQVASISP 375

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA------EVLFTAKNTTLAQEI 426
                      +  Y V + + D   ++   +L    P              +  + + +
Sbjct: 376 -------APTEEGMYIVEITLPDGMQTNYGKQL----PVSRELKGTADIILADKNVLERL 424

Query: 427 IHPIT 431
           + P+ 
Sbjct: 425 LAPLR 429


>gi|332826795|gb|EGJ99609.1| hypothetical protein HMPREF9455_04023 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 445

 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 63/435 (14%), Positives = 152/435 (34%), Gaps = 36/435 (8%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP--FS 64
             +       +    ++  I +     W I  P       +G+I    N+  +K P   S
Sbjct: 27  DRMPTAFSKWVAAAIIVFSILLFIFG-WLIKYP----DVVTGQIKINSNMSPVKLPAHVS 81

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I     +    + +G  +   ++   TD +             +  +    +    K+
Sbjct: 82  GKINILGFKAQDTVKEGEYIAVIQNSANTDDVQKI--------ASLMNQFDPNESGTFKH 133

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            V     +    +L      + S+   + +Y   +VY        +  S+       E  
Sbjct: 134 TVTLFPEKVSLGELNMKYYSFLSSLKSIIDYSDDNVYEQ------QQISLVDGIKWREKI 187

Query: 185 SSLLRALLSSHQKDLTMMKNLFEK-NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
            +  +  LS   ++L + +   +K ++++++ ++  E  + +S +EL       +N+++ 
Sbjct: 188 LNETKNALSISTENLEISEKWLDKYSSLNKDLVSTYEFEIDRSRIELLSARQNNQNLVKE 247

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF-ADEMSKLTILEKTREQ----KTILSPIAG 298
           I  +  +   E  N L ++  +  + +R    D  +    L    +Q      + +P  G
Sbjct: 248 IASVEMQI-TESENKLSQLLVERREKERQLHLDLFASYHELNDQIKQWEQTYVLKAPFDG 306

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            + + + +++  + Q  + +  IVP       +  +       VK G   T++   Y   
Sbjct: 307 QVEFLKFWANDQFVQAGEDVFGIVPKENSILGQVLLPAMGAGKVKTGSNVTIKLDDYPYA 366

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL-----RNGFPAEV 413
                K I+  I  I ++   +      Y V++ + D   ++   +L       G   + 
Sbjct: 367 EFGSIKGIVRSISLITNEYKTSQSNINTYLVMVDMPDGLITNYGDKLDFKYEIGG---QA 423

Query: 414 LFTAKNTTLAQEIIH 428
               K+  L + +  
Sbjct: 424 DIIVKDRRLIERLFD 438


>gi|229082955|ref|ZP_04215376.1| hypothetical protein bcere0023_55440 [Bacillus cereus Rock4-2]
 gi|228700355|gb|EEL52920.1| hypothetical protein bcere0023_55440 [Bacillus cereus Rock4-2]
          Length = 337

 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 51/325 (15%), Positives = 128/325 (39%), Gaps = 10/325 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L R  P+ +K         ++  I W  L  I+I    +  + +  +V  I++  +GI++
Sbjct: 17  LDRKPPSFVKWFLGFLGFCLLFGILWGYLGKIDIVSKGTAIVQSGQDVSIIRTSLNGIVE 76

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V++G +I +G  ++ F++ E  D    KK  +  +  HI+ +K+ L  L +  +   
Sbjct: 77  ELRVKSGDEIKKGDIIIQFKNEELMD----KKKQLDIMINHIEIQKNMLLQLKSSIEKEV 132

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            +F    +       K +    K+      S  + L+       +  + +     +  + 
Sbjct: 133 NSFSENVDSKFLEEYKSYENGYKLLRKEKESEIKMLEQNKVSNETDEVLQGLFVEQEKIE 192

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           + +      +   +  + ++    + +L + ++      +E R++I + +N    I + +
Sbjct: 193 QEIKMLEHNNGQDLSGVLKEEFDYKVNLLKSQKGNIGKRIEQRKSILDSENKKILIQKKH 252

Query: 249 DEANLEFA--NYLKE----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            E   + A   Y ++    I++ LE+ +     +  +   L       +I S   G +  
Sbjct: 253 KEEQNKIALDKYKQDNIVAINQRLEKMEEDLFLKKQEKDSLLNNEGNMSIRSSKDGIVQL 312

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKL 327
           +      +  +  Q +  I+P    
Sbjct: 313 SSPLQKGDLLEAGQEITSIIPKESE 337


>gi|703127|gb|AAB51080.1| leucocin A secretion protein [Leuconostoc gelidum]
          Length = 457

 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 58/425 (13%), Positives = 139/425 (32%), Gaps = 35/425 (8%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           ++   RN P  +     L ++ II     S+    EI V +SGEI+    + +I+S  + 
Sbjct: 13  YQRRYRNFPTLIIVPIFLLVVFIILF---SLFAKREIVVKASGEIIPAKVLSDIQSTSNN 69

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I   Q+     + +G  L+TF          L    + NL   + +  +    + N   
Sbjct: 70  AIDSNQLTENKVVKKGDTLVTFTSGNEKISSQLLTQQLNNLNDRLKSLDTYKQSIVNGRS 129

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                 +   + L +       T +  FN   S    + +    ++  +   +     + 
Sbjct: 130 EFGGTDQFGYDSLFNGYMAQVDTLTSEFNQQSSDKQTADQQANHQIDVLKQGQSKNNQQL 189

Query: 186 SLLRALLSSHQK------------------DLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           +  +A+L+S                      L   +   +K+ V Q  L+  ++ + +  
Sbjct: 190 ANYQAILTSINSNTKPTNNPYQAIYDNYSAQLKSAQTTDDKDQVKQTALSNVQQQIDQLQ 249

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKE----ISRDLEQNQRTFADEMSKLTIL 283
                   +   + +           + A+  ++      +++   Q++  +  +K +  
Sbjct: 250 TTSSSYDSQIAGITKSGPLSQSSTLDKIADLKQQQLASAQKEINDQQQSLDELKAKQSSA 309

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQ 340
            +  +   I +P  G +      +   Y  +   + +I P         +   V    I 
Sbjct: 310 NEDYQDTVIKAPEDGILHLATDKTKIKYFPKGTTIAQIYPKLTQKTALNVEYYVPASNII 369

Query: 341 HVKKGYTATVRFPHYADIREK-KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
            +K+     +RF    ++ +       I+ I           +   +Y+++  I      
Sbjct: 370 GLKQRQA--IRFVANQNVTKPLTLNGTIKSISS----APIASKEGSFYKLVATIQASKID 423

Query: 400 DNNIE 404
              I+
Sbjct: 424 REQIK 428


>gi|300868297|ref|ZP_07112926.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300333732|emb|CBN58110.1| conserved exported hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 550

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 61/423 (14%), Positives = 133/423 (31%), Gaps = 60/423 (14%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + I+VS++G I  E +V  +    SG++K   V+ G ++ QG  L   +D      +   
Sbjct: 58  LPIAVSANGTIQPERSV-NVSPKTSGMLKSLLVKEGDRVQQGQLLAYMDDSNLRGQLTQA 116

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  + +   ++    +     +    V       ++  L   L              ++ 
Sbjct: 117 QGQVASAEANLQKLLNG--NRSEDIAVARAQLAEQQANLQKLLNGNRPEDIAAARGQLAE 174

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
              +L+  +   RS  + +    ++ +  +  L     DL   + L+   A++   LN  
Sbjct: 175 QQANLQKVINGNRSQDIAQA--RSRLADAQYALRQAGDDLQRNQELYTAGAIALQSLNTS 232

Query: 220 ERIVYKSTLELR---------------ENIHEQKNMLRHINEL------------YDEAN 252
                ++  +++               E I + +  ++   E               +A 
Sbjct: 233 RTTRDRAQTQVKQAEEALALLQAGARPEEIAQARAAVQQRQEALALLEAGSRPEDIAQAR 292

Query: 253 LEFANYLKEIS--------RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                  + ++         D+ Q +   A     +  +E       I +  +G +   +
Sbjct: 293 AVVQQRQEALALLEAGSRPEDIAQARAQLASAKGSVQTIEALINDTVIRAAFSGIVTR-K 351

Query: 305 SFSSSNYAQQSQPLMKIVPHS--------KLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
                 +   +     +   +            + A V    I  ++     T++   Y 
Sbjct: 352 YADPGAFVTPTTAGSAVSSATSSSILSLASTNQVVANVAETNISQIRLKQEVTIQADAYP 411

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
               K F   + +I P    Q N       +EV + I D    D    LR+G  A V F 
Sbjct: 412 ---GKTFTGQVNQISPQSIVQQNVTS----FEVKVGIID----DPQGLLRSGMNANVEFK 460

Query: 417 AKN 419
              
Sbjct: 461 VGE 463


>gi|253563995|ref|ZP_04841452.1| HlyD family transporter [Bacteroides sp. 3_2_5]
 gi|251947771|gb|EES88053.1| HlyD family transporter [Bacteroides sp. 3_2_5]
 gi|301161699|emb|CBW21239.1| putative HlyD-family transporter [Bacteroides fragilis 638R]
          Length = 437

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 62/432 (14%), Positives = 147/432 (34%), Gaps = 36/432 (8%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L+    +  + ++ +I+ S  +     V ++ EI   +    + S  +G I+    E G 
Sbjct: 23  LRWGITIFFVFLLLVISVSGFIRYPDIVPATVEITTINPPANLISKVNGKIEIIFTEEGE 82

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            I +G  L   E       + +    I  L   I       D L+   +      +    
Sbjct: 83  SITKGQVLAILESPAQWKDMKILDHYITVLENTI-----GKDSLSVIPEPDFLRNDLELG 137

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN-KSSLLRALLSSH 195
           ++           ++++N+  S ++    + L   +      L  EN K  LL+  +   
Sbjct: 138 EVQGRYADLKLNYTELYNFLHSGLFEEEVLSLQEKKQAQKQLLVQENRKRELLKTQIRLA 197

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQ---ERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            K+      LF K  +S++++ Q+         S +++  NI   K+ L+ +     +  
Sbjct: 198 DKEYQRDSILFVKEVISESEIEQRHQNRLQFQSSLVDMEVNILNIKSSLKQLRSDLKKIE 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           L+     +E++  L Q+      +           +   I +PI G + +   +S +   
Sbjct: 258 LKHNTDRQELTNKLLQSTHLLKAQTETWK------QNYLITTPIDGKVSFTTYWSKNQNV 311

Query: 313 QQSQPLMKIVPHSKLTYIRAKV--TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +  + +  +VP       +A++    +    +K+G    ++  +Y           + KI
Sbjct: 312 KSGELIFSVVPIDS-MTTKARLQFPIQNSGKIKEGQQVNIKLQNYPYQEFGMLVGHLSKI 370

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP------AEVLFTAKNTTLAQ 424
             + ++          Y   + +     +     L    P       +      + +L  
Sbjct: 371 SEVPNELL--------YSADVVLDKGLITSYGKRL----PKVQQLKGDAEILTDDLSLLM 418

Query: 425 EIIHPITDNWPK 436
              +P+   +  
Sbjct: 419 RFFNPLRAIFDH 430


>gi|39997916|ref|NP_953867.1| HlyD family secretion protein [Geobacter sulfurreducens PCA]
 gi|39984861|gb|AAR36217.1| HlyD family secretion protein [Geobacter sulfurreducens PCA]
          Length = 329

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 55/379 (14%), Positives = 108/379 (28%), Gaps = 82/379 (21%)

Query: 45  SSSGEILNEDNVVEIKSPFS----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           ++ G +    N+            G +++  V+ G  +  G  +   +D           
Sbjct: 28  TADGIVRVSGNIEVTDVELGFKIPGTVRERLVDEGVMVETGQVVARLDD----------- 76

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                LR  +  E    + L                                        
Sbjct: 77  ---DELRLEVAREGRQAEALA--------------------------------------- 94

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              L+   T  R   + + D   K +   A     + D    + LF +  +S+ D +  +
Sbjct: 95  -AQLRELETGFRREEIAQADAAVKRAQADA--DRLEADFARQEALFRREVISRRDYDAAK 151

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                S  +L E    Q+ M R                       ++  +         L
Sbjct: 152 AARDASQAQLHEVQARQELMHRGPR-----------------REQIDAARARLNQAREAL 194

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +        T+ +P+ G ++               P++ I   S     RA +    + 
Sbjct: 195 ALARTRLSHATLAAPLNGLVLSKHV-EPGEQVAAGTPIITIGDLSNTWL-RAYIPETDLG 252

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            +K G  A ++   + D R    +  I  I P       N+QT +    ++    +A  +
Sbjct: 253 RIKVGQKARIKNDTWPDRRY---EGTITFISPEAEFTPKNVQTDKERVKLVYRIKIAIPN 309

Query: 401 NNIELRNGFPAEVLFTAKN 419
            N EL+ G PA+      +
Sbjct: 310 PNRELKPGMPADAEIITGS 328


>gi|60680174|ref|YP_210318.1| HlyD family transporter [Bacteroides fragilis NCTC 9343]
 gi|60491608|emb|CAH06360.1| putative HlyD-family transporter [Bacteroides fragilis NCTC 9343]
          Length = 437

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 62/432 (14%), Positives = 147/432 (34%), Gaps = 36/432 (8%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L+    +  + ++ +I+ S  +     V ++ EI   +    + S  +G I+    E G 
Sbjct: 23  LRWGITIFFVFLLLVISVSGFIRYPDIVPATVEITTINPPANLISKVNGKIEIIFTEEGE 82

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            I +G  L   E       + +    I  L   I       D L+   +      +    
Sbjct: 83  SITKGQVLAILESPAQWKDMKILDHYITVLENTI-----GKDSLSVIPEPDFLRNDLELG 137

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN-KSSLLRALLSSH 195
           ++           ++++N+  S ++    + L   +      L  EN K  LL+  +   
Sbjct: 138 EVQGRYADLKLNYTELYNFLHSGLFEEEVLSLQEKKQAQKQLLVQENRKRELLKTQIRLA 197

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQ---ERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            K+      LF K  +S++++ Q+         S +++  NI   K+ L+ +     +  
Sbjct: 198 DKEYQRDSILFVKEVISESEIEQRHQNRLQFQSSLVDMEVNILNIKSSLKQLRSDLKKIE 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           L+     +E++  L Q+      +           +   I +PI G + +   +S +   
Sbjct: 258 LKHNTDRQELTNKLLQSTHLLKAQTETWK------QNYLITTPIDGKVSFTTYWSKNQNV 311

Query: 313 QQSQPLMKIVPHSKLTYIRAKV--TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +  + +  +VP       +A++    +    +K+G    ++  +Y           + KI
Sbjct: 312 KSGELIFSVVPIDS-MTTKARLQFPIQNSGKIKEGQQVNIKLQNYPYQEFGMLVGHLSKI 370

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP------AEVLFTAKNTTLAQ 424
             + ++          Y   + +     +     L    P       +      + +L  
Sbjct: 371 SEVPNELL--------YSADVVLDKGLITSYGKRL----PKVQQLKGDAEILTDDLSLLM 418

Query: 425 EIIHPITDNWPK 436
              +P+   +  
Sbjct: 419 RFFNPLRAIFDH 430


>gi|116625387|ref|YP_827543.1| secretion protein HlyD family protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116228549|gb|ABJ87258.1| secretion protein HlyD family protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 422

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 56/376 (14%), Positives = 127/376 (33%), Gaps = 26/376 (6%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + ++  I +  SG I +  VE+   +  G  L+  +  +    +   +  + + R  +  
Sbjct: 61  DGHIHAISARISGHISQVLVEDQQIVKAGDVLVVIDPRDYDVAVAKAEADVADARAALTG 120

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            ++ +   +          ++ +  L D      S   ++      S   + + ++T  +
Sbjct: 121 SQTEIPITSTNT---ASTLQTAQSTLADSRAGLLSAQRQL--SAAESRLAAAEAQVTEAQ 175

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           + Y    D E +   L            + + L+E+ A +             S  E R 
Sbjct: 176 ANYKKAADDERRYKQL-------VDKEEISQQLYEQAAQAAAAAKATVDTRIASVNEARH 228

Query: 233 NIHEQKNMLRHINELYDEANLEFANYL---KEISRDLEQNQRTFADEMSKLTILEKTR-- 287
           N+   +  ++       +A     + L   ++++    + + + A    +  +L + R  
Sbjct: 229 NVAVAEAAIQQAQAKVPQAEASIQSALTAPQQVAISRSKAKSSEAKLAQQAALLAQARLN 288

Query: 288 -EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
               TI++P AG I   ++          Q LM IV    +  I A     Q++ ++ G 
Sbjct: 289 QSYTTIVAPAAGII-GKKTVEVGQNVSPGQQLMAIVQLDDVWVI-ANFKETQLRRMQPGQ 346

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNN 402
                   Y+   + +   I        S       T  Y +V+    ++I      + +
Sbjct: 347 RVRFSVDAYSREYQGRITGIGGASGSRFSLLPPENATGNYVKVVQRIPVRIDLDPGQNAD 406

Query: 403 IELRNGFPAE--VLFT 416
             LR G   +  V   
Sbjct: 407 HHLRPGMSVDPKVFLR 422


>gi|298506852|gb|ADI85575.1| efflux pump, RND family, membrane fusion protein [Geobacter
           sulfurreducens KN400]
          Length = 329

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 55/379 (14%), Positives = 109/379 (28%), Gaps = 82/379 (21%)

Query: 45  SSSGEILNEDNVVEIKSPFS----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           ++ G +    N+            G +++  V+ G  +  G  +   +D           
Sbjct: 28  TADGIVRVSGNIEVTDVELGFKIPGTVRERLVDEGVMVETGQVVARLDD----------- 76

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                LR  +  E+   + L                                        
Sbjct: 77  ---DELRLEVAREERQAEALA--------------------------------------- 94

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              L+   T  R   + + D   K +   A     + D    + LF +  +S+ D +  +
Sbjct: 95  -AQLRELETGFRREEIAQADAAVKRAQADA--DRLEADFARQEALFRREVISRRDYDAAK 151

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                S  +L E    Q+ M R                       ++  +         L
Sbjct: 152 AARDASQAQLHEVQARQELMHRGPR-----------------REQIDAARARLNQAREAL 194

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +        T+ +P+ G ++               P++ I   S     RA +    + 
Sbjct: 195 ALARTRLSHATLAAPLNGLVLSKHV-EPGEQVAAGTPIITIGDLSNTWL-RAYIPETDLG 252

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            +K G  A ++   + D R    +  I  I P       N+QT +    ++    +A  +
Sbjct: 253 RIKVGQKARIKNDTWPDRRY---EGTITFISPEAEFTPKNVQTDKERVKLVYRIKIAIPN 309

Query: 401 NNIELRNGFPAEVLFTAKN 419
            N EL+ G PA+      +
Sbjct: 310 PNRELKPGMPADAEIITGS 328


>gi|284039086|ref|YP_003389016.1| hypothetical protein Slin_4232 [Spirosoma linguale DSM 74]
 gi|283818379|gb|ADB40217.1| hypothetical protein Slin_4232 [Spirosoma linguale DSM 74]
          Length = 341

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 118/355 (33%), Gaps = 19/355 (5%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L T E+    D +     ++  L+  +   K  L  +    D+     +     L + L 
Sbjct: 2   LATIENEARFDNVQQLVQALAELKVRLLQFKPDLLPIKLPDDLQIGELQVVYLNLKNALN 61

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            Y        +  ++S  + +     R+R     +L LE + +     L+  +K L   +
Sbjct: 62  TYQ------LSKKVNSYDKQIIGIKQRIRLYSNLQLQLERQKNTRLEDLALAEKILNTSR 115

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            LF    +++ +  + ++       +L        N    I +   +        L+   
Sbjct: 116 KLFSDRVIAEVEFTRSQQEYLHVKQQLEAIEISLANNQILIKQFEAQIIDLDVRQLEINE 175

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           R L   +       S+L   ++T     + +PIAG +   +  ++  Y      L+ IVP
Sbjct: 176 RLLTDIKTYHRQLESQLITYQQTYW---LEAPIAGRVTLLRFLNNRRYITAGTELITIVP 232

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             +  Y +A V   +   V+ G    V+F ++           I  +  +          
Sbjct: 233 SMQPIYGQAFVPIARSGKVEVGQKVNVKFDNFPYNEFGFVVGYIAAVSSV--------PR 284

Query: 384 QEYYEVILKITDLAFSDNNIEL--RNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
              Y V +       ++ N +L  R            + +L   + + I   + +
Sbjct: 285 DGVYTVRITFPKGLITNYNKKLLFRQEMTGSADVITADISLFNRVFYQIRSIFVR 339


>gi|326801478|ref|YP_004319297.1| secretion protein HlyD [Sphingobacterium sp. 21]
 gi|326552242|gb|ADZ80627.1| secretion protein HlyD family protein [Sphingobacterium sp. 21]
          Length = 390

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 60/419 (14%), Positives = 134/419 (31%), Gaps = 71/419 (16%)

Query: 15  ASLKRMTLLSIIGIIGLITWSI----LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           A +K+ T +  +GI+ L   +     L+ I ISV  SG + +     ++  P +G +  F
Sbjct: 20  ARVKKTTQIIYLGILLLFILAFASLPLVTINISVKGSGLLQSSIEKTDVSIPVNGRLVYF 79

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            +++  ++  G  LL  +   +                             NK D+L K 
Sbjct: 80  NLKDNQKMTLGDTLLIIDGSSS-----------------------------NKQDLLVKG 110

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              R++++  F+   H+   +      S             +           +    R 
Sbjct: 111 ---RQQEISLFVKDLHTLIRQANAEDFSPPNLQSGQYFAIWQQYI-------QEVENARI 160

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                +        L++K  +S  + ++ +    +++  L                    
Sbjct: 161 AKEQAENTFNRYSKLYKKKMLSSAEYDKYDFEYKQASAALA------------------- 201

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
             +    Y  +   ++ Q Q      +S+   + + R+Q  + +PI G++          
Sbjct: 202 --MVSRKYKAQWQTEVNQLQNELRQLLSQQIDINEQRKQFVVTAPIDGSVQNLVGMQKGT 259

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           Y   +Q + +I P          + P  I  +KK      +   +   +       +  I
Sbjct: 260 YVFANQKVAEISP-DTTLLAFCYINPSDIGLIKKEQEVRFQIDAFNYNQWGLLTGRVIDI 318

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
              I   ++    Q  ++V   + +   +  N     ++ G      F+    TL Q +
Sbjct: 319 SDDIVMLND---KQPVFKVRCALNNDHLTLKNGYKGYVKKGMSFTARFSVTERTLFQLL 374


>gi|307154399|ref|YP_003889783.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 7822]
 gi|306984627|gb|ADN16508.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           7822]
          Length = 552

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 49/382 (12%), Positives = 127/382 (33%), Gaps = 33/382 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + + +SG +    +V  I     G + K  V+ G  + QG  L   E+ E        
Sbjct: 118 LSVKIEASGTVEPIQSV-NISPKNPGRMIKLLVDQGMPVKQGQVLAVMENAEIAAQGYQA 176

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  ++    ++   +  +     +        ++R  + L  L +              S
Sbjct: 177 EARVQEALANLKAAEVKIPGEIAQAKARLGQAQARLAENLANLQRSQ-----------QS 225

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           + + ++    ++++I       E++    +AL++          ++      +  +  + 
Sbjct: 226 IPKDIEQAQQQLQAIESRFQLAESRVRRKQALVTQGAITQDEFDSVLNDYFNALANRREA 285

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           ++ + +     +  I++ +  ++       EA +      +    ++ Q +        +
Sbjct: 286 QQRLQQFENTAQPQINQLQQNIQESQAAVAEAKIALEQRQRTADAEIAQLKAQVNAARGQ 345

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYA--------QQSQPLMKIVPHSKLTYIR 331
           L  ++       I +P  G +   +  +   +           S     I+  ++   + 
Sbjct: 346 LEQIKIQYNDTIIRAPFDGIVTQ-RYATEGAFVTPTTSASSTASATSTSILAMARGLKVV 404

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           AKV    +  ++ G  AT+    Y D     FK  + +I P    + N       +EV +
Sbjct: 405 AKVPEVDLSFLQLGQPATIVADAYPDT---LFKGQVVRIAPEAIVEQNVTS----FEVTV 457

Query: 392 KITDLAFSDNNIELRNGFPAEV 413
                A       L +    +V
Sbjct: 458 -----ALLPGQNRLLSKMNVDV 474


>gi|86606525|ref|YP_475288.1| membrane fusion protein family protein [Synechococcus sp. JA-3-3Ab]
 gi|86555067|gb|ABD00025.1| transporter, membrane fusion protein (MFP) family [Synechococcus
           sp. JA-3-3Ab]
          Length = 381

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 53/360 (14%), Positives = 116/360 (32%), Gaps = 46/360 (12%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT-DLIDLKKVS 102
           V + G +  E  VV +  P    + +  V  G ++  G  L   E         +     
Sbjct: 48  VGALGRLEPEGEVVRVAGPPGERLGELLVAEGERVRAGQVLARLESYRERLAEREYAAAQ 107

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           ++  R  ++ E                                         +G + V  
Sbjct: 108 LQEARARLEAET---------------------------------------RFGQAQVEE 128

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +            +     E     LRA L+  + +L   + L+++ A+SQ +L+Q+  +
Sbjct: 129 ARTRLSRLDEPQQMQIRSQEAVVERLRAELADAEANLARFQALWQEGAISQQELDQKALL 188

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           V +   +LR    E       +    D  N +      E      Q Q         L +
Sbjct: 189 VRQRQEDLRA--AEATLDQLRLARERDLRNAQAQVQAAEAGLRRAQAQVQLGSLARNLEL 246

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            E   E+  I +P AG ++  ++            ++++    ++  + A+V    I  V
Sbjct: 247 AEARLERTLIRAPRAGQVLKIRTR-PGEVIAADTGILELGNTDQMMVV-AEVYETDILRV 304

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEYYEVILKITDLAFSD 400
           + G  AT+      +  + + + +  +I    +++            EV +++   + + 
Sbjct: 305 RPGQRATISNRALPETLQGRVERVGLQIGKKDVLNTDPAADVDARVVEVYIRLDPESSAR 364


>gi|188575532|ref|YP_001912461.1| putative membrane fusion protein/putative ABC transporter protein
           required for AvrXa21 activity A (raxA) [Xanthomonas
           oryzae pv. oryzae PXO99A]
 gi|22023552|gb|AAM89121.1|AF389909_2 putative membrane fusion protein RaxA [Xanthomonas oryzae pv.
           oryzae]
 gi|188519984|gb|ACD57929.1| putative membrane fusion protein/putative ABC transporter protein
           required for AvrXa21 activity A (raxA) [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 412

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 53/391 (13%), Positives = 118/391 (30%), Gaps = 52/391 (13%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G ++  D ++ I +P SG++    V  G ++  G  L                   ++ R
Sbjct: 60  GAVVPADGMIAITTPQSGVVANVGVVQGQRVAAGQVLFVL------------AAEHRDDR 107

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                                       +Q    L +     ++      +      +  
Sbjct: 108 GR------------------------PSQQAAAVLAEQQRLTAEAMVQLRAQGRLQQQAA 143

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS- 226
              +  +      ++ +  +LR      Q      +    +  VSQ  +++++  V    
Sbjct: 144 ARALAGLRNRLEQVDAELGVLRHRQQLTQFIEQRYRTALTRGLVSQQFVDEKQADVLDQR 203

Query: 227 --TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              LEL+       + L        +  +     L      L+ ++RT  ++ +      
Sbjct: 204 AHALELQRERLTLADALAQAQAELQQLPVSLRQQLALAGASLQADRRTAIEQAAA----- 258

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
               +  + +P AG +   +         Q Q L  ++P S  T +      +    +  
Sbjct: 259 ---SRWEVRAPRAGRV-ALRPLQRGQAVGQGQRLADLLPTSTATEVVLYAPSRAAGLIGP 314

Query: 345 GYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           G    +RF         +F   + +I   P   + D  L ++  Y V +++   A     
Sbjct: 315 GIPVQLRFDALPYQHYGQFAGRVVEIAAAPEPPRADAALASEPLYRVRVRLAGDAALRAG 374

Query: 403 IE--LRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               LR G   +     +    +Q    P++
Sbjct: 375 HAAVLRPGMRVQGTLALEWRRFSQWAFEPLS 405


>gi|126657530|ref|ZP_01728686.1| hypothetical protein CY0110_29769 [Cyanothece sp. CCY0110]
 gi|126621234|gb|EAZ91947.1| hypothetical protein CY0110_29769 [Cyanothece sp. CCY0110]
          Length = 489

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 45/349 (12%), Positives = 107/349 (30%), Gaps = 26/349 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + + +SG +   ++V  I     G + + +VE G ++ +G  L   E  E        
Sbjct: 56  LAVDIEASGVVEPIESV-NISPKNPGRLIQLRVEQGMKVKEGQILALMEHTEVKAEGKYA 114

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV-FNYGIS 158
           + +       +D  K  +              E ++ Q      +     +K        
Sbjct: 115 EANYNQALAELDAAKVRIPS------------EVQQAQTRYVQAQTQLEQAKANLEQAGQ 162

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            + + +     ++ S         ++      LL            L      +Q  L +
Sbjct: 163 RIPKDIDQIKAQIVSAQSTVQLAASRVKRNEELLQEGAITQDRFDELLNNYNNAQASLIE 222

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  + ++    +  I + K  +        EA ++          ++ + +       +
Sbjct: 223 LQTRLEQANQTTKPEIEQLKQEVVQAQATVAEAQIQLEERKTTAKTEIARLEAAAEASKA 282

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYI 330
           +L  +    +   I +P  G +    +     +           S     I+  ++   +
Sbjct: 283 QLEQVVIQFQDTAIRAPFEGIVTQKYAN-PGAFVTPTTSASSTASATSSSILALARGLKV 341

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            AKV    I  +K+G    +    + +     FK  +  I P    +DN
Sbjct: 342 VAKVPEVDIAMIKQGQPVMITADAFPNE---VFKGQVVLIAPEAVVEDN 387


>gi|37521583|ref|NP_924960.1| hypothetical protein glr2014 [Gloeobacter violaceus PCC 7421]
 gi|35212581|dbj|BAC89955.1| glr2014 [Gloeobacter violaceus PCC 7421]
          Length = 442

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 58/377 (15%), Positives = 110/377 (29%), Gaps = 53/377 (14%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V  G  + +G  ++  +D E    +      I   R      +  +D L  + 
Sbjct: 97  GRVDRVTVREGDAVRRGQLIVQLDDAEIQAQLAGAVARIAAARQQQRQARLQIDVLEAQ- 155

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                     + QL     +  +           +  RS                  E +
Sbjct: 156 --------VTQAQLELTQSRGDARGRIAQADAQVAAARS-------------QLAQAEAQ 194

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S   A L     +    + L  + A S    +Q +     +   L           + +
Sbjct: 195 VSEAEADLKLAVANRNRFEQLVREGATSVQQFDQAQTTFDAAQATLAARKAAVNAARKQV 254

Query: 245 NELYDEANLEFANYLKEISRD--LEQNQRTFADEMSKLTILEKTREQKT----------- 291
                         L    R   L+  +R  A   S+L   E+  +              
Sbjct: 255 TAAEGTLTQTRTTALNPAVRTAGLDVARRQLAQARSQLLATEEDVKNAEATRRELLAQIA 314

Query: 292 ---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              I SPI G +V  +S          + ++ ++   +  Y+R  +   Q+  V+ G  A
Sbjct: 315 YLNITSPIDG-VVTARSVEPGAVVTAGKTVLSLL-DFRTVYLRGYIPEGQLGRVRVGQKA 372

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQD-----NNLQTQEYYEVILKITDLAFSDNNI 403
            V         E+   A +  +DP  S         + + ++ + V L + D A      
Sbjct: 373 RVFL---DSAPERPLAARVAAVDPQASFTPESIYFRDERVRQVFGVKLLLEDPAGYAK-- 427

Query: 404 ELRNGFPAEVLFTAKNT 420
               G PA+     + T
Sbjct: 428 ---PGMPADAEILTEET 441


>gi|260778887|ref|ZP_05887779.1| multidrug resistance protein A [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605051|gb|EEX31346.1| multidrug resistance protein A [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 351

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 50/374 (13%), Positives = 112/374 (29%), Gaps = 82/374 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           +  +  I    +G I+   V +  ++ +G  L+  +D +        + +++  + H+  
Sbjct: 51  QGEITTISPKVAGYIEHSFVSDNQKVKKGDLLVQIDDRDY-------RTALEQAKAHLTV 103

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +S                                               S++    +  
Sbjct: 104 TQS-----------------------------------------------SVENLKAQQT 116

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                    E++    +A      + +   ++L ++N  SQ++++        +  EL E
Sbjct: 117 LQQSQIHQAESRVDSAKAEYDRAVQQVQRSRSLLKRNYASQDEVDNMLAQQKVTQAELDE 176

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                                   + L  I  D++Q Q +  +  + +   +   +   I
Sbjct: 177 AKASLVAA---------------HDQLAVIDSDIKQAQASIVESQTAVEQAQLNLDYTKI 221

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P+ G IV  +S       Q   PLM +VP S   +I A     Q+  + +G    +  
Sbjct: 222 YAPVDG-IVGKRSVREGLLVQAGTPLMSLVPTSD-VWIEANFKETQLSGIHQGQKVEIEL 279

Query: 353 PHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             +     +  + I++   P           +      T+    V +KIT          
Sbjct: 280 DAFP---GQPLEGIVDSFSPATGAKFALLPPENATGNFTKIVQRVPVKITIPDQQALKGR 336

Query: 405 LRNGFPAEVLFTAK 418
           L  G         +
Sbjct: 337 LLPGLSVVATIDTR 350


>gi|306830075|ref|ZP_07463261.1| BlpC ABC superfamily ATP binding cassette transporter
           [Streptococcus mitis ATCC 6249]
 gi|304427788|gb|EFM30882.1| BlpC ABC superfamily ATP binding cassette transporter
           [Streptococcus mitis ATCC 6249]
          Length = 453

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 64/439 (14%), Positives = 148/439 (33%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GE+     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFIVIFSLVATKEITVTSQGEVTPTSVIASIQSTSDNTILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +          +  ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALETQLQRLEKQKEGLGILKQSLEKNTDLFS 131

Query: 129 KAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNR 178
              E        +  +Q  D       T ++V N     +S   +++ ++T+M+      
Sbjct: 132 GEDEFGYYNTFMNFTKQAHDIELGISKTNTEVANQANLANSSSSAIEQEITKMQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +     +++ + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIINKRARLPTGNPHQSILNRYLVASQEQTQETADEPFLSQINQSIANLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P  G +  N  F   N       + +I P    ++   I   V+   +  + KG 
Sbjct: 312 NTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +    V L   D         ++
Sbjct: 372 TVRLKLEKIGN-HGITIIGQLQSIDQTPTRTEQGNLFKLTALVKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|219667806|ref|YP_002458241.1| efflux transporter RND family, MFP subunit [Desulfitobacterium
           hafniense DCB-2]
 gi|219538066|gb|ACL19805.1| efflux transporter, RND family, MFP subunit [Desulfitobacterium
           hafniense DCB-2]
          Length = 457

 Score = 93.5 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 60/420 (14%), Positives = 133/420 (31%), Gaps = 78/420 (18%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEI-------------------LNEDNVVEIK 60
            TL++ + ++ +  W I   +  + S+S  +                   +   N  ++ 
Sbjct: 16  TTLIAALAVVVIGIWGITALLGGNKSASANVAHTKLAKTELINSVDVSGSIKSKNTQKVY 75

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S  S  +K+  V  G ++  G PL   +           ++ I   R   +  +      
Sbjct: 76  STLSYSVKEIYVNIGDKVEAGEPLAQLDT-------SSLELDIAQQRSTFEASQKTGTI- 127

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                             L+   + +    K +  G+++        L    S+     D
Sbjct: 128 -----------------NLESKKRIYEDTKKQYENGMNTE------LLNAENSLKSAEND 164

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L  K +     + S           ++  AVS+ +L+Q E     +     +     +  
Sbjct: 165 LTTKKNTYENNVES-----------YKFGAVSKQELDQSEAGYKLAQNTYNKAAASLEAA 213

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                +    A   + + L + + D          +   L  LEK     TI +PI+G +
Sbjct: 214 KIKAAQDVKTAEANYNSALADYNND---------SQKIALDKLEKNLADATIKAPISGVV 264

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                ++ +        L+ +V  ++   I   V       VK G    ++        +
Sbjct: 265 T--AVYAEAG--SPGNGLLFVVEDAEKLTITTYVKEYDADKVKPGQMVNIKTDA---TED 317

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + F   + +I P  ++  N         V  + T++   + + +L+ G  A +    +  
Sbjct: 318 ELFAGQVVRISPASTKTANGTTDTSNTTVEFE-TEVDILEPDDQLKIGMNARLNIIIEKK 376


>gi|159029798|emb|CAO90852.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 510

 Score = 93.5 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 121/361 (33%), Gaps = 41/361 (11%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           + + GL  W+I+  I   +     IL   ++V I+    G +    ++ G  + +G  L 
Sbjct: 72  LLLGGLSYWAIVGKIPTPIQGRAVILIPRSIVNIEPRQGGRVLTLLIQPGDSVKKGQLLA 131

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           T E  E    +  KK  + +L+             + + D +E +        ++   K 
Sbjct: 132 TLEFPELETELKDKKDRLADLKQQ-----------DKRVDSIEVSRRQLNAASIERQQKA 180

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           +    K     ++S  +  +  L+  R               L+   +S  + L     L
Sbjct: 181 NQLQIKALQVQLASNQKQREAYLSHAR--------------YLKNFQNSTDERLAAYDKL 226

Query: 206 FEKNAVSQNDL---------NQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-LEF 255
            E+ AV++ D           +    + +  +EL       +++   +N L  + N L  
Sbjct: 227 IEEGAVAKLDFPSYLFQFNNLEASNSINRVQIELDRLKGVDESLRAQMNALTAQNNILNT 286

Query: 256 ANYLKEISRDLEQNQR--TFADEMSKLTILEKTRE-QKTILSPIAGTIVYNQSFSSSNYA 312
                ++        R    AD+  ++  L+ T +  K ++S   G I+           
Sbjct: 287 EKRQIDLQDTASDILRYNAIADQQREINTLKTTIQANKNVVSLYNGQILDLSVN-PGEVL 345

Query: 313 QQSQPL--MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                +  +++      T + A       + ++ G    V    Y   R     A +  +
Sbjct: 346 APGGRIGTLEVSNLKAKTNVVALFKSGDAKRLEPGQEVEVVPDLYDRERYGGIVAKVVSV 405

Query: 371 D 371
           D
Sbjct: 406 D 406


>gi|294649655|ref|ZP_06727069.1| MFP family membrane fusion protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292824471|gb|EFF83260.1| MFP family membrane fusion protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 382

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 60/408 (14%), Positives = 128/408 (31%), Gaps = 65/408 (15%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           K +    +I I+  I ++I         S+          ++ S  SG + +  V++  Q
Sbjct: 27  KFLGFFMLILILAAILYAIWALFFNHSVSTDNAYVGAETAQVTSMVSGQVAEVLVKDTQQ 86

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + QG  L+  ++ +    +   +  +   +      ++    LN++  V      S + Q
Sbjct: 87  VKQGDVLVRIDERDAKIQLAQAQAELAKAQRQYKQSQANSRSLNSQVVVRNDEISSAQAQ 146

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +      Y                                           RA L   ++
Sbjct: 147 VTKAQADYD------------------------------------------RASLELKRR 164

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +      L    A+S+ +L++ +  V   K++LEL +    Q    R   E    AN   
Sbjct: 165 N-----ELAATGAISKEELSKAQSAVSTAKASLELAQAGLAQATSSRKAAESTFAANEAL 219

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              + E S              + +   +   E+  I +P+ G I   ++          
Sbjct: 220 IQGVNEAST------PDVLVAKAHVDQAQLDLERTVIRAPVDGVIAR-RNIQIGQRVAPG 272

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA-----DIREKKFKAIIEKI 370
             +M +VP S   Y+ A     Q+  VK G   ++    Y          + F       
Sbjct: 273 TVMMSVVPVSD-LYVDANFKESQLAKVKAGQKVSLTSDLYGGDVIYHGTVQGFSGGTGAA 331

Query: 371 DPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +I  Q+      +  +   V + +     +++ + +     A++  
Sbjct: 332 FALIPAQNATGNWIKVVQRLPVRISLDPKELAEHPLRVGLSMQADIDL 379


>gi|148652320|ref|YP_001279413.1| secretion protein HlyD family protein [Psychrobacter sp. PRwf-1]
 gi|148571404|gb|ABQ93463.1| secretion protein HlyD family protein [Psychrobacter sp. PRwf-1]
          Length = 444

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 96/312 (30%), Gaps = 19/312 (6%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            F+  +  ++         Q+        S    +      +  + L+     ++    N
Sbjct: 128 AFVKGRTTIISPQVSGYVTQVAVQDFAKVSAGDLLIKIDDRNFQQQLEQAAANIQVAITN 187

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKN--LFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           R + E  + + +A + +   DL   +   L  +  V +    +   I   S  E+     
Sbjct: 188 RANNEQDAQVSQAQIDARLADLHSAQARVLSAEQDVQRYQDLEAMTIGAVSKAEVAHTQA 247

Query: 236 EQKNMLRHINELYDEANLEFANYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           +       + +   +ANLE A   ++     L           +     +   +   I +
Sbjct: 248 QLAQAKAGVEQA--QANLEAAQQARQKTIGSLSSLDANIKSAQAVAKQAQINLDNTIITA 305

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P +G +          Y      LM IVP        A     Q+ ++  G  AT++   
Sbjct: 306 PESGQLSQLSV-KIGQYVTPGTQLMYIVPKGVWVI--ANFKETQVANIAIGDRATIQVDA 362

Query: 355 YADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVI----LKITDLAFSDNNIELR 406
                 K F   +  + P      +    N  T  Y +V     ++I   A   + + LR
Sbjct: 363 LG---GKTFTGRVSNLSPATGSELTTGSANPATGNYIKVAQRIPVRIDLDANQPDIVRLR 419

Query: 407 NGFPAEVLFTAK 418
            G   E     K
Sbjct: 420 PGMSVEADVDTK 431


>gi|240114971|ref|ZP_04729033.1| putative secretion protein [Neisseria gonorrhoeae PID18]
          Length = 311

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 101/315 (32%), Gaps = 20/315 (6%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSV-YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +Q L        T ++     +  +     +     +  +   +L +  +    +  +  
Sbjct: 2   QQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLHISQQIDGQKRRIRL 61

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++ L   + L   +AVS+ ++   E  + +   +L     E+  +L+ I       NL 
Sbjct: 62  AEEMLRKYRFLSANDAVSKQEMMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ----NLT 117

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +         
Sbjct: 118 LASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQVDP 175

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           S+ L+ IVP     Y    +       +K      +R+  Y   +       +  +    
Sbjct: 176 SKLLLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVAKTA 235

Query: 375 SQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
             +                 +  Y V +K      +       L+ G   E     +   
Sbjct: 236 LGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHEKRR 295

Query: 422 LAQEIIHPITDNWPK 436
           L + ++ PI     +
Sbjct: 296 LYEWVLEPIYSMSGR 310


>gi|95931227|ref|ZP_01313947.1| Secretion protein HlyD [Desulfuromonas acetoxidans DSM 684]
 gi|95132705|gb|EAT14384.1| Secretion protein HlyD [Desulfuromonas acetoxidans DSM 684]
          Length = 489

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 63/426 (14%), Positives = 142/426 (33%), Gaps = 75/426 (17%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E++V ++G +   D VV   +          VE G+ + +G  L+  +     D +  +
Sbjct: 49  LEVTVEAAGSLRARDQVVISNTLEGRTTILSLVEEGTNVSKGDKLIELDASTLQDRLIDQ 108

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +++++N        +  L+ + N+                          S V    ++ 
Sbjct: 109 QITVQNAEASFVQARENLEVVKNQ------------------------AQSDVDEAKLAV 144

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            Y    +K  R       + +  ++ ++    L   ++ L   + LF++  +SQ +L   
Sbjct: 145 TYAEDDLKKYREGEFPNEKKEQLSQIAVDEEELRRAEEKLEWSRVLFDEKFISQTELQAD 204

Query: 220 ERIVYKSTLELR---------------ENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           E    K+ ++L                  + E    +       +    +    + +   
Sbjct: 205 ELAAQKAGIDLELSRSNLDLLLKFTHVRRLTELNAEVEKTRMALERIQRKAKASVIQAQA 264

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-----------SSSNYAQ 313
           DL   Q     E  +L+       +  +++P  G +VY  SF           ++    +
Sbjct: 265 DLNAKQALLERERGRLSKTRDELNKTVLVAPQDGIVVYATSFQRSWRGNNEPLTAGQEVR 324

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           + Q L+ + P S     + ++    ++ V+ G  A V       +  K F A ++ +   
Sbjct: 325 ERQELIYL-PSSGTMVAQTQIHESNLEKVELGQKARVYV---DSMPGKSFLAEVKSVAVF 380

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF-----------------PAEVLFT 416
                + L       + L  TDL   +++  LR+G                  P + +  
Sbjct: 381 PDATSSWLNPD----LKLYRTDLELLEHDDALRSGLNCRIEIDVAHLEDVVTIPVQAVVI 436

Query: 417 AKNTTL 422
               T 
Sbjct: 437 DGGRTF 442


>gi|150018701|ref|YP_001310955.1| secretion protein HlyD family protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905166|gb|ABR35999.1| secretion protein HlyD family protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 349

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 50/379 (13%), Positives = 120/379 (31%), Gaps = 79/379 (20%)

Query: 46  SSGEILNEDNV----VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           +   ++ + NV    V + +   G +K+ +V+ G  + +G  LL  +           + 
Sbjct: 37  AQSNLIVQSNVDMTDVNVNTLIPGKVKEIKVKEGDNVKKGDVLLIVDSDTLAAQQAQVQA 96

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            I+  +  ++  ++A D  + K ++ +      E                          
Sbjct: 97  QIETAKSQLNAAQAARDAASAKLELAQNGARPEE-------------------------- 130

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                                      ++     +  +  +K L+++ ++ ++D +  E 
Sbjct: 131 -----------------------IDQAKSAYDLAKVTVDRLKVLYDQGSIPKSDFDNAET 167

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +  +  +   +I +       I     + +        + +  +E  +       + L 
Sbjct: 168 QMQVAKDKY--DIAQSGARPEDIKAAQAQVD--------QANASVEAVEGQIKQAEAALQ 217

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
            +       T+ +P  GTI       +         L+ +    + + +   V    +  
Sbjct: 218 GVNVNLNYATVTAPEDGTITQVNV-EAGEVISTGMQLIVVTKTDEPSIL-CNVRETDLSK 275

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS------QQDNNLQTQEYYEVILKITD 395
           V      +V+ P Y D    +FK  + +I+            DN       Y V +++TD
Sbjct: 276 VDLEQEVSVKIPAYKDE---EFKGKVVRINKDADFAVKRATNDNGEFDVLSYGVKVELTD 332

Query: 396 LAFSDNNIELRNGFPAEVL 414
                N+  LR+G  A V 
Sbjct: 333 -----NDKPLRSGMTAFVD 346


>gi|94971603|ref|YP_593651.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
 gi|94553653|gb|ABF43577.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
          Length = 354

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 58/365 (15%), Positives = 123/365 (33%), Gaps = 54/365 (14%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           + + N V + S   G I++  V+ G+ + QG  +   +  E        + +I + R  +
Sbjct: 36  VVDANNVVVSSRIMGRIERLAVDEGTPVKQGDLIAVIDSGELQAQKAAAETTIASYRARV 95

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              ++       +                                  +S   + + +L  
Sbjct: 96  SQARAGATQAEGET---------------------------------ASQLTTAQARLQA 122

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            RS Y             +A L   + D T +  L ++   S+ D   QER    + L++
Sbjct: 123 ARSAYAQS----------QADLDRVKSDATRLIELAKQGVASKAD---QER--SDAQLKM 167

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            +   +  +      E   +         K     L  +Q       ++LT  E      
Sbjct: 168 AQAAVQNASDQIRAAESDVKTYQARLEQAKAAQSTLAGSQEDVKTAEAQLTEAETRLGYT 227

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            +++P+ G +V  ++          Q ++ +V +    ++ A +       +  G T TV
Sbjct: 228 QVVAPVTG-VVNVRAAREGEVVNPGQAIVTVVDYGDT-WVYAPLPETDSGGINLGDTLTV 285

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           R   Y     ++ K I +  +   + Q +  +T+   +  + I     ++   +L  G  
Sbjct: 286 R---YPWNATEQGKVIYKAAEADFATQRDVSRTKRDIK-TIAIKVRVQNNQQGKLVPGMT 341

Query: 411 AEVLF 415
           AEVL 
Sbjct: 342 AEVLV 346


>gi|332876699|ref|ZP_08444457.1| hypothetical protein HMPREF9074_00174 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332685258|gb|EGJ58097.1| hypothetical protein HMPREF9074_00174 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 443

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 98/276 (35%), Gaps = 13/276 (4%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQER 221
                  + + I  N    E   +  + LL +  + LT+ +   +K A + +ND+   E 
Sbjct: 164 QENTYEKQRKGIMDNIRWNERLQTSSKELLETVGRKLTLSQKWLDKYAAANKNDIITYEY 223

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            + ++  E    I E++++ + I  L  +    + N        + + Q+   + ++   
Sbjct: 224 EIDQAKNEYLSTIQEEQSLKKEIISLQKQTADNWNNPHLLDVEQMNEAQKLHLNLLTAYQ 283

Query: 282 ILEKTR----EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
            L        ++    +P  G + + +  S + Y Q  + +  I+P     + +  +   
Sbjct: 284 ELSDNIKSWEQRYVFKAPFDGKVDFLKFVSENQYVQAGEQVFGILPSENKIFGQLLLPSM 343

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
               V KG    ++  +Y        +  +  I  +   Q +   T E Y + +++ +  
Sbjct: 344 GAGKVSKGNKVAIKLDNYPYREYGSIEGRVHSISILTQTQQSVENTVETYLITVELPNGL 403

Query: 398 FSDNNIEL-----RNGFPAEVLFTAKNTTLAQEIIH 428
            ++    L       G         K+  L + +  
Sbjct: 404 ITNYGDTLDFQYELGGI---ADIIVKDRRLLERLFD 436


>gi|323491938|ref|ZP_08097107.1| Multidrug resistance protein A [Vibrio brasiliensis LMG 20546]
 gi|323313796|gb|EGA66891.1| Multidrug resistance protein A [Vibrio brasiliensis LMG 20546]
          Length = 353

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 57/374 (15%), Positives = 113/374 (30%), Gaps = 82/374 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + ++  I    SG I K  V +  Q+ QG  L+  +D +          ++     H+  
Sbjct: 53  QGDITTISPKVSGYIVKSYVSDNQQVKQGQLLVQIDDRDYQA-------ALSQSEAHLVV 105

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            KS                                               S+K  + +  
Sbjct: 106 AKS-----------------------------------------------SVKNLIAQQT 118

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                    E++    +A      + ++  ++L ++N  SQ++L+        +  EL E
Sbjct: 119 LQRSQINQAESRVDSAQAEYDRAVQQVSRSRSLLKRNYASQDELDSMLAQQKVTLAELEE 178

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                                   + L  I+ ++EQ Q +  +  ++L   +   +   +
Sbjct: 179 AKANLAAS---------------NDQLIVIASEIEQAQASVTEAQAQLQQAQLNLDYTKV 223

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G I   +S       Q   PLM +VP +   +I A     Q+  + KG    V  
Sbjct: 224 YAPTDGII-GKRSVREGLLVQAGAPLMSLVPENG-VWIEANFKETQLSGIHKGQKVEVEL 281

Query: 353 PHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             +     K  + +++   P           +      T+    V +KIT    +     
Sbjct: 282 DAFP---GKTLEGVVDSFSPATGAKFALLPPENATGNFTKIVQRVPVKITLPEQNALEGR 338

Query: 405 LRNGFPAEVLFTAK 418
           L  G         +
Sbjct: 339 LLPGLSVVATIDTR 352


>gi|282901146|ref|ZP_06309077.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
 gi|281193978|gb|EFA68944.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
          Length = 488

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 61/389 (15%), Positives = 129/389 (33%), Gaps = 69/389 (17%)

Query: 49  EILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            I     V  I+S       +G++ +  VE G ++ QG  +   +D E    I   + ++
Sbjct: 68  RITASGKVQPIQSVNVSPKNAGLLAELNVEQGQKVEQGQIIARMDDSEIRMGILQFQANL 127

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  +  +   ++                 SR E +     + +   +++      S  + 
Sbjct: 128 EQAKAQLADAEAG----------------SRVEDIAQAKARVNQAKAQLEIISSGSRSQE 171

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           ++                +      R+ L   Q  L   + L ++ A+SQ+ L+Q     
Sbjct: 172 IEQA--------------KASVEGARSQLELTQARLNRYQKLAKEGAISQDTLDQYIAEN 217

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-----------RDLEQNQRT 272
            ++   LRE   E++  L+       E   + A   +E             +++ +    
Sbjct: 218 KRAKSNLRE--AEKRLSLQEAGNREQEIRRQQAVVTQETEGLRKLQNGSRPQEIARLTAV 275

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPH 324
                ++L   +   E   I +P AG I    +     +           S     IV  
Sbjct: 276 VEAAKAQLKRQQVQLEDTIIRAPFAGIITQKYAN-IGAFVTPTTSASSSTSATSSSIVAL 334

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           ++   + A +    I  +K+G    +    Y    E+ F   +  I P    +    Q  
Sbjct: 335 ARGLEVLALIPEADIARIKQGQQVEIISDAYP---EQVFTGRVRLIAPEAVIE----QGV 387

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEV 413
             ++V + I      +   +LR+G   +V
Sbjct: 388 TSFQVRIFI-----VNGGDKLRSGLNVDV 411


>gi|253682096|ref|ZP_04862893.1| efflux transporter, RND family, MFP subunit [Clostridium botulinum
           D str. 1873]
 gi|253561808|gb|EES91260.1| efflux transporter, RND family, MFP subunit [Clostridium botulinum
           D str. 1873]
          Length = 487

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 44/380 (11%), Positives = 111/380 (29%), Gaps = 57/380 (15%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V+ G  +  G  +   +  +    +D  +  ++     +      +   + + 
Sbjct: 69  GKIAELNVKEGDYVRAGQVIGRLDSKDYNFAVDGARGQLEAANGQVAAANGQVAAASGQA 128

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  +   ++ E+Q+             +    + +        L   +   +NR  L  K
Sbjct: 129 EAAKGQMQAAEKQIA------------MAQAKVDAAKAQYDKALNGAQKEDINRAKLAVK 176

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL------------RE 232
           ++      +  +K    ++ L+ +  VS+  L+  +  +  + ++L              
Sbjct: 177 NA--EDTYNYAEKSYERIEKLYAEGIVSKQQLDDIKIKLDSAKVDLDNKKELLTKAENGA 234

Query: 233 NIHEQKNMLRHINELYDEANLEFANY-------------LKEISRDLEQNQRTFADEMSK 279
              +++  L   N    +     A Y                        Q       ++
Sbjct: 235 RDEDKQAALAGYNAAKAQLEAARAQYDAAQGQYNAALGQKNAAQGQSTAAQGMRNSAETQ 294

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
               +   E   + + ++G +V      S        P++ I   +    I  +V    I
Sbjct: 295 YESKQSMLEDTNLKASVSGYVVKVL-NKSGENVAAGYPVVVI--RTDDQVIDIQVAQNDI 351

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +K G    +      DI+       I +I+ +   +         Y+  +++      
Sbjct: 352 NKIKVGIKTDI---AINDIKT---TGSIVEIEQVPDPKSRT------YKAKIRMDKQVPK 399

Query: 400 DNNIELRNGFPAEVLFTAKN 419
           D       G  A V      
Sbjct: 400 DKFFV---GTVANVSIKLAE 416


>gi|296273809|ref|YP_003656440.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
 gi|296097983|gb|ADG93933.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
          Length = 377

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 106/366 (28%), Gaps = 59/366 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           ++     G I    V N   + +G  L+  +  +T+  ++  K ++      +    +  
Sbjct: 61  QVTPSVGGTISDVLVSNTQVVKKGDILVKIDQTDTSLAVEEAKANLSLAIRRVKGYMAN- 119

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                                               N G++++  + K    RM      
Sbjct: 120 ------------------------------------NNGLNALIEARKADEMRM------ 137

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
                 K S  +A     Q DL   + L    A+S ++L + +     +   L E I E 
Sbjct: 138 ----NAKLSSAKADFQKAQIDLKRREKLILSGAISADELTKAKNAYENAKSNLDETIAEV 193

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           K    +I       N         I     +N        ++L        +  I +PI 
Sbjct: 194 KQSKSNIVSAIGSRNQNATR----IDNVSVENNPEVLLAKARLDQAIVNLNRTIIKAPIG 249

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I   Q        Q   PL+ IVP     Y+ A     ++  VK G    V    Y D
Sbjct: 250 GIIAKRQV-ELGQRVQAGTPLLSIVPTQN-IYVNANFKEVKLGKVKVGQDVIVHADIYGD 307

Query: 358 IRE--KKFKAIIEKI----DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
                 K +            I +Q       +    V ++I  L        L+ G   
Sbjct: 308 DVTYHGKVEGFSGGTGAAFSLIPAQNATGNWIKVVQRVPVRIKLLPEELKAHPLKVGLSM 367

Query: 412 EVLFTA 417
           +V    
Sbjct: 368 DVEINT 373



 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
             ++ +       +   N   IK+P  GII K QVE G ++  GTPLL+    +
Sbjct: 230 ARLDQA-------IVNLNRTIIKAPIGGIIAKRQVELGQRVQAGTPLLSIVPTQ 276


>gi|294507416|ref|YP_003571474.1| similar to multidrug resistance efflux pump [Salinibacter ruber M8]
 gi|294343744|emb|CBH24522.1| similar to multidrug resistance efflux pump [Salinibacter ruber M8]
          Length = 457

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 50/375 (13%), Positives = 112/375 (29%), Gaps = 68/375 (18%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIK 68
             PA  + + ++S + ++ L      +P   +VS SGE+     E     ++S  S  + 
Sbjct: 73  QSPAITRSILVVSALFLVVLGVALAFVPWRQTVSGSGEVTAYAPEARPRTVESRISARVA 132

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
            + V  G ++ +G  +   ED+ ++ L D     +   R                     
Sbjct: 133 DWHVVEGDEVAKGDTVAVLEDLGSSYLDDQFADRVAAQRT-------------------- 172

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                       ++ +   ++    ++      R   + K S  
Sbjct: 173 --------------------------NTLNGLRLEVERARQKLAQARQKRRSADEKVSNA 206

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +S+ +  L  +++L +    S  DL        K+    R +       L       
Sbjct: 207 TLGVSTARTRLARIEDLQDDGISSVRDLETARLKFRKA----RTDSVAAAADLAAARRAV 262

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           + A L      +++        R   +   + +          + +PI+GT+        
Sbjct: 263 ESARLNVERKEQKLEAKQAALSRKVGNARERAS-------NAIVRAPISGTVSSINRVGP 315

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY--------ADIRE 360
               ++   L  + P +        V+      ++ G    ++F  +         D   
Sbjct: 316 GQIVKKGTTLATVAPKTDDRAAELFVSSIGASLIEPGRQVQLQFSGFPALQFSGLPDAST 375

Query: 361 KKFKAIIEKIDPIIS 375
             F   +  IDP+  
Sbjct: 376 GTFTGTVRFIDPVGD 390


>gi|312621446|ref|YP_004023059.1| efflux transporter, rnd family, mfp subunit [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201913|gb|ADQ45240.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 663

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 137/401 (34%), Gaps = 39/401 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I +SV+ SG I      V++ S  S  I     ++G  + +G  +   E  +  D ID  
Sbjct: 68  ITVSVTGSGPIE-SAQSVDLTSTVSSTITNVFFKDGDSVKKGDVIFELESQDAKDKIDSI 126

Query: 100 KVSIKNLRCHIDTEKSAL---------------------DFLNNKYDVLEKAFESREEQL 138
           K  I ++   I   + ++                     D ++    +L     S+ +  
Sbjct: 127 KSQIDDVNSSIADVQESIKNLVITAPISGYVKNLNVQEGDRVSKGSTILTIIDTSKLKVT 186

Query: 139 LDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           L F                 IS + +S++  ++ + +      D   K   +   +S+  
Sbjct: 187 LPFSAALFGKVKIGAPAVVYISDISQSVQGTVSYLGNTTYTN-DYGGKVFDVEITISNPG 245

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LRENI-HEQKNMLRHINELYDEANLE 254
                MK   E    ++  L+ Q+  +     E ++  +  E + +    N+  ++  + 
Sbjct: 246 ALQEGMKASAEIKVGTEVYLSTQDATLEYVDKENVKAKVDGEVEEIFARNNQFVEKGAVL 305

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                 ++S+ L+  Q    +   +L   E   E   I +P  G +     F   +  + 
Sbjct: 306 LKLSNDDLSKQLKNYQTQLKNLQDQLKDAEDNLENYYIKAPFDGVVTNIN-FKKGDNIKA 364

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + L   V  +K    R  +    I  +K G    +      + +       + KI P+ 
Sbjct: 365 GEVLAT-VFDNKNLVFRVDIDELDIAKIKVGQKVNITVDALPETQTNPLTGKVSKI-PLE 422

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +  N + T   Y V + I     +  N+++  G  A    
Sbjct: 423 GKTQNGVTT---YSVTISID----NPKNLKI--GMNANAEI 454



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/165 (10%), Positives = 50/165 (30%), Gaps = 15/165 (9%)

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++    ++  +    D  S +  ++++ +   I +PI+G +         +   +   ++
Sbjct: 117 QDAKDKIDSIKSQIDDVNSSIADVQESIKNLVITAPISGYVKNLNV-QEGDRVSKGSTIL 175

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I+  +    +    +      VK G  A V     +   +         +  + +    
Sbjct: 176 TII-DTSKLKVTLPFSAALFGKVKIGAPAVVYISDISQSVQG-------TVSYLGNTTYT 227

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           N    + ++V + I++            G  A             
Sbjct: 228 NDYGGKVFDVEITISNPGALQE------GMKASAEIKVGTEVYLS 266


>gi|298491617|ref|YP_003721794.1| RND family efflux transporter subunit MFP ['Nostoc azollae' 0708]
 gi|298233535|gb|ADI64671.1| efflux transporter, RND family, MFP subunit ['Nostoc azollae' 0708]
          Length = 500

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 50/362 (13%), Positives = 115/362 (31%), Gaps = 42/362 (11%)

Query: 49  EILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            I     V  ++S        GII    +E G ++ +G  +   ++ E    I   + ++
Sbjct: 65  RITASGKVQPVQSVNISPKNPGIITDLDIEQGEKVQKGQIIARMDNSEIKMRILQYQANV 124

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  +  +                 E    SR E++     +     +++      +  + 
Sbjct: 125 EEAKAQLA----------------ESLAGSRPEEIAQAKARVAQAKAQLAIIRGGNRSQE 168

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +      + S        + +    + L  +       ++    +N  S+  L + +   
Sbjct: 169 IDQAKAAVDSAKAQVELTQARVKRYQGLAKAGAISQDSLEQYISENKRSKASLEEAQ--- 225

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            + +L+   N +E       +     E   +  N  +    ++ + + + A  +++L   
Sbjct: 226 ARLSLQKAGNRNEDIKSQEAVVAQEQETMGKLENGNR--PEEIARLKASVAGAVAQLKQQ 283

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYIRAKVT 335
           E   E   I +P AG +    +     +           S     IV  +    + A+V 
Sbjct: 284 EVQLEDTIIRAPFAGVVTQKYAN-IGAFVTPTTSASTSTSATSSSIVALAMGLEVLAQVP 342

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              I  + +G    +    Y D     FK  +  I P    +    Q    ++V + I  
Sbjct: 343 EADIGRISQGQQVEIVADTYPDQ---VFKGRVRLIAPEAVVE----QGVTSFQVRVVIDS 395

Query: 396 LA 397
            A
Sbjct: 396 GA 397


>gi|240125004|ref|ZP_04737890.1| putative secretion protein [Neisseria gonorrhoeae SK-92-679]
          Length = 311

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 101/315 (32%), Gaps = 20/315 (6%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSV-YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +Q L        T ++     +  +     +     +  +   +L +  +    +  +  
Sbjct: 2   QQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLHISQQIDGQKRRIRL 61

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++ L   + L   +AVS+ ++   E  + +   +L     E+  +L+ I       NL 
Sbjct: 62  AEEMLRKYRFLSANDAVSKQEMMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ----NLT 117

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A++ K    +  Q +RT AD   ++   E  R ++ I +  +G I    +         
Sbjct: 118 LASFPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQVDP 175

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           S+  + IVP     Y    +       +K      +R+  Y   +       +  +    
Sbjct: 176 SKLFLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVAKTA 235

Query: 375 SQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
             +                 +  Y V +K      +       L+ G   E     +   
Sbjct: 236 LGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHEKRR 295

Query: 422 LAQEIIHPITDNWPK 436
           L + ++ PI     +
Sbjct: 296 LYEWVLEPIYSMSGR 310


>gi|282899125|ref|ZP_06307106.1| DevB [Cylindrospermopsis raciborskii CS-505]
 gi|281196041|gb|EFA70957.1| DevB [Cylindrospermopsis raciborskii CS-505]
          Length = 478

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 58/425 (13%), Positives = 138/425 (32%), Gaps = 54/425 (12%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSG-----IIKKFQVENGSQILQGTPLLTFEDIETT-DLI 96
           ++++ G +     V++I +P SG      +++  V+ G ++ +G  +   +  ++    +
Sbjct: 59  TITAVGRLEPRGEVIKIAAPNSGLSAGSRVQELLVKEGEKVQKGQIIAILDSRDSNMAAV 118

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  +  ++  R ++   KS+                  + QL        +T +++    
Sbjct: 119 EEARAKLQESRANLAQVKSSSPR---DIQTQNAVIYRLQAQLQGEEKTQQATIARIAAEL 175

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                            +   R  L      +RA   + Q D      L+++ A+SQ + 
Sbjct: 176 SGQKLVQSATVKRLEAELIGQRDILRASVERVRAEQRNAQVDAGRYDFLYKQGAISQQER 235

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN------- 269
           +++      +T +LRE+    K  +  + +   EA       +  + + L +        
Sbjct: 236 DRRSVNAITTTQQLRESQASLKQGIATLQQQISEARANQMRTIATLQQQLLEAIATRNQT 295

Query: 270 ----QRTFADEMSKLTILEK-------------------------TREQKTILSPIAGTI 300
               QR   +E S+L  L                             +   + +P  G I
Sbjct: 296 LSTLQRQIDEERSRLNKLLDVSPMDLQIARAQVSSAIALIKKAQSDLQLSYVKAPTRGEI 355

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              +  + S        + +I   +   ++ A++    I  V  G   TV          
Sbjct: 356 --LKIHTKSGEVMNLNGIAEIG-QTDQMFVVAEIPEDSIGRVSMGQLVTV--TSDNGAFS 410

Query: 361 KKFKAIIEKIDPIISQQDN-NLQTQEYYEVILKITDLAFSDNNIELRNGFP---AEVLFT 416
            +    I +I   I ++D  N       +  +    ++ S  + +  +G       V   
Sbjct: 411 GQIPGNITEIGRKIGKKDVLNTDPAADIDARVVEVKISLSPQDSQRVSGLTNAKVMVEIN 470

Query: 417 AKNTT 421
              ++
Sbjct: 471 TDQSS 475


>gi|186685628|ref|YP_001868824.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186468080|gb|ACC83881.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 474

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 128/377 (33%), Gaps = 50/377 (13%)

Query: 44  VSSSGEILNEDNVVEIKSPFSG-----IIKKFQVENGSQILQGTPLLTFEDIETT-DLID 97
           +S+ G +     VV++ +P SG      I++  V  G Q+ QG  L   ++ +T    ++
Sbjct: 63  ISAVGRLEPRGEVVKLSAPSSGLAPSSRIQQLLVREGEQVKQGQILAILDNRDTQIAGLE 122

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K  ++  R ++   ++                   + Q +       +T +++     
Sbjct: 123 EAKAKVQEARANLAQVRAGSPR---DIQAQRAVVARLQAQFVGERDAQQATIARIAAQLS 179

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                           +   R  L    + +RA   + Q D      L+ + A+SQ + +
Sbjct: 180 GDKLVQQATVNRLEAELSGQREALRATLTRIRAEQRNAQVDAGRYDFLYREGAISQQERD 239

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-------- 269
           ++      S  ++ E+    K  L  I +   EA       L  + + L +         
Sbjct: 240 RRRLSAVTSNQQVAESQATLKQTLATIRQQLAEARANQIQNLATLQQQLIEAKVNRDKTL 299

Query: 270 ---QRTFADEMSKL-------------------------TILEKTREQKTILSPIAGTIV 301
              QR   +E +KL                            E       + +PIAG I 
Sbjct: 300 ATLQRQIEEEKAKLSRILDVSPTDVQVAQAQVSNAIANVRKAEAQLRLSYVQAPIAGEI- 358

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + ++ S  A  +  + +I   +   Y+ A+V    I  V+ G  AT+           
Sbjct: 359 -LKVYTKSGEAIGANGIAEIG-QTSQMYVIAEVAEDSIGKVQIGQNATI--SSDNGAFSG 414

Query: 362 KFKAIIEKIDPIISQQD 378
           + K  + +I   I ++D
Sbjct: 415 ELKGTVTEIGRKIGKKD 431


>gi|126658186|ref|ZP_01729337.1| hypothetical protein CY0110_11647 [Cyanothece sp. CCY0110]
 gi|126620557|gb|EAZ91275.1| hypothetical protein CY0110_11647 [Cyanothece sp. CCY0110]
          Length = 490

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/323 (10%), Positives = 107/323 (33%), Gaps = 44/323 (13%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V++G ++ +G  ++  ++ +    +   +  + + +  +   ++         
Sbjct: 90  GRINEILVQDGDRVGKGQLMVQLDNNDWQAELLEAQAQLASRKARLAELEAG-------- 141

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   +R E + +   +     +++ N         +                 + +
Sbjct: 142 --------NRVEDIQEAKARLREAKARLNNAQTGGSLEEIAQA--------------QAQ 179

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +A     ++ +   +NL ++ A+S ++  +       ++ EL +       + +  
Sbjct: 180 VNSAQASAELAKQRVGRYENLEQEGAISTDEYQEYVTEARSASAELEQAQRRLSQLKKSR 239

Query: 245 NELYDEANLEFANYLKEISR--------DLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
               DE         + + R         + Q +   A+ ++++   E    +  I++PI
Sbjct: 240 LTNVDELQAAVEREEQNLRRLQTGPRQEVIAQARADVAEAIAQVRTAEVNVSKTRIVAPI 299

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G +       + +Y  Q   L  +   + L  +   +  +    ++ G    +      
Sbjct: 300 SGIVGDIPV-EAGDYVDQGDTLTTLT-QNNLLELNLSIPLEDASRLRLGLPVQI----LD 353

Query: 357 DIREKKFKAIIEKIDPIISQQDN 379
           +  +      I  I P ++    
Sbjct: 354 NQGKAIATGNISFISPNVTADSQ 376


>gi|258514232|ref|YP_003190454.1| secretion protein HlyD family protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777937|gb|ACV61831.1| secretion protein HlyD family protein [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 464

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 50/372 (13%), Positives = 119/372 (31%), Gaps = 36/372 (9%)

Query: 22  LLSIIGIIGLIT----WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
             +++ I  ++     W +   I   V   G I N   +  I S  SG I   +V  G  
Sbjct: 32  WFALLAIACILLTSVLWGVFGSIPTKVYGQGVIANSFGIYNIVSGDSGQISDIRVVVGDH 91

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  +      +  + I+  K+ ++ L+                  + E   +   ++
Sbjct: 92  VNKGEVVARINHPQLAEQINDLKIELEQLK-----------------KLDENGIKEGNDK 134

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            +        + ++      +++  +       +  +  +    +N     R      + 
Sbjct: 135 NIGSELADLFSLTQKITEAKAALINAEVDYENAISGLSYDIQMADNSLEQARVSEQGKKS 194

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE--------NIHEQKNMLRHINELYD 249
            L  M +L++  AVS+ND    +R      + ++            + ++ +    +  +
Sbjct: 195 YLDKMTSLYQSGAVSKNDYENAKRDYDLQRMLVQSAEQNLSKLTAGQWQDTIIKYRQNLE 254

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +A L      ++ +           DE+ KL    K      I + + G +V  +     
Sbjct: 255 QAQLSLQMLKEQFATTKATRIAEAEDEVKKLQ--NKLITSSEIAAQVDGRVVEIKVN-RG 311

Query: 310 NYAQQSQPLMKIVPHSKLTYIRA--KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
           +  Q    L+ +          A   V+ ++ + +  G  A +        +       +
Sbjct: 312 DIVQSGTCLVSMDREGSTIKQEAVLYVSAEEGKKILPGMEALISPSTVKKEQYGYILGRV 371

Query: 368 EKID--PIISQQ 377
             I   P  SQ 
Sbjct: 372 TSISEYPATSQD 383


>gi|160425351|gb|ABX39515.1| ABC transporter accessory protein [Streptococcus sanguinis]
          Length = 453

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 70/444 (15%), Positives = 163/444 (36%), Gaps = 41/444 (9%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR +      +T+   + II L+ +S+    E++V+S G+I   + V  I+S     +K 
Sbjct: 13  KRRYHNFATVLTIPLTLLIIFLVLFSLFATKEVTVTSVGQITPTNIVASIQSTSDHTVKV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDV 126
             +     + +G  L+++ +          +  ++  +     ++T K++L   NN +  
Sbjct: 73  NNLTENQTVKKGELLISYTETLEASQKQAIETQLERYKHQKEGLETLKTSLKQGNNLFGD 132

Query: 127 LEK-----AFESREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRL 179
            ++      + +   Q+ D         ++V N     S+V  ++  +++++++   +  
Sbjct: 133 NDEFGYGNIYNNFVNQVNDINLGISKANTEVSNQTAIASNVATAIDNQISKLQAQIKDYN 192

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           DL N  S   + L        M  +      ++Q   NQ   I  +   ++  NI   ++
Sbjct: 193 DLYNAISNNSSSLPEGNSYQDMFNS-----YLNQYKANQDTSITSQYLTQIGSNISSLES 247

Query: 240 MLRHIN--------------ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
            + ++                   +  +    +++   + L   Q    D  ++L   + 
Sbjct: 248 SISNLEIQKAGTGSPSVYDGSATTKIEVLRTQFIQNADQQLVTTQAQITDLENQLNQTDD 307

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHV 342
             +   ++SP  G I  N+S+   N   +   + ++ P    ++  +I   VT   + ++
Sbjct: 308 QLQNNQLISPENGVIHLNESYKGKNLLPKGTEIAQLYPQIKENQEVFISYYVTSAYLPNL 367

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           KKG T  +      +         I+ ID   ++          ++V   I     S  N
Sbjct: 368 KKGQTVRLSLEKIGNQPL-VITGKIKSIDQTATETKEG----SVFKV---IAKAKLSKEN 419

Query: 403 IELRN-GFPAEVLFTAKNTTLAQE 425
            +L   G    V       +    
Sbjct: 420 SKLVRYGLQGRVTSVIAKKSYFNY 443


>gi|310643892|ref|YP_003948650.1| protein [Paenibacillus polymyxa SC2]
 gi|309248842|gb|ADO58409.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
          Length = 486

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 61/394 (15%), Positives = 129/394 (32%), Gaps = 62/394 (15%)

Query: 38  LPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
             I  S+S +G +     V     +     +    V+ G  +  G  L   +D +    I
Sbjct: 63  ANITESLSVTGTVQASKEVNINFTNVEGAKLVAVNVKAGDSVKAGQVLARLDDSDARLQI 122

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              + ++   R  +D  K                                   +      
Sbjct: 123 KDAESNVAIARAKLDEAKRG-------------------------------PKTNDIELQ 151

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            ++V ++     T    + L     + +++ +   L   QKD      L + +A +++DL
Sbjct: 152 KANVLKAQMAIKTAKNGMELEEAAAQKEAAKM--TLDKAQKDYDDQAYLVQNDAAAESDL 209

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--------SRDLEQ 268
              ++ + K+ L++     + K       E  +EA + +   L ++        + +++ 
Sbjct: 210 ATAKQNLDKAKLDMSNAELQYKKAQTKQTEAIEEAEMGYKTALIQLKAAQSPPEASNIQS 269

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL- 327
            Q +     + L   +    +  + +P  G I+             S     IV ++   
Sbjct: 270 AQASLLQAETALEQKKSVLSKLQVTAPWDGIILKVN-----GDVGTSPTAPFIVMNNSNT 324

Query: 328 --TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               + AKV    I  +K G  AT+    + D   K+FK  +  + P    + N      
Sbjct: 325 GVMKVLAKVNESDIAKLKTGLQATMHSNSFPD---KQFKGEVRFVSPEPVTEANVTT--- 378

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            Y++     +L+    NI L+ G   +V      
Sbjct: 379 -YKI-----ELSLDSQNIRLQPGMNMDVSLLLAE 406


>gi|220931349|ref|YP_002508257.1| efflux transporter, RND family, MFP subunit [Halothermothrix orenii
           H 168]
 gi|219992659|gb|ACL69262.1| efflux transporter, RND family, MFP subunit [Halothermothrix orenii
           H 168]
          Length = 509

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 68/455 (14%), Positives = 138/455 (30%), Gaps = 64/455 (14%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP------ 62
           +K N P  +  M L+ +  + G +     +P+ +       I  E++V  +  P      
Sbjct: 1   MKPNKPVIVTLMFLMLVTLLSGQVFGETQIPVSVIEPGVKSIRVEESVTGVIKPYQVVNL 60

Query: 63  ---FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
                GI+ +  VE G ++  G PLL  E  E    +   +  +   R      K     
Sbjct: 61  STKTGGIVDEILVEVGQRVEAGEPLLKLEQEELKAQVKQARAQLAMARASFKKIKDGA-- 118

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
             +  DV +      +        +      K      +S  + L    T++ +      
Sbjct: 119 --SPEDVEKVRGAYNQALASYNGARKALNIIKDMYEDKTSQEQQLTAARTKLDTASKKLE 176

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE------- 232
               +           +K    M+ L+E+  +++++ ++ +     +   L+        
Sbjct: 177 LAREQLKQTEVSYEQAEKSYKRMEYLYEEGVITESEFDKVKTQYENAKSALKSAELGLEQ 236

Query: 233 ----------------------NIHEQKNMLRHINELYDEANLEFANYLKEI------SR 264
                                    EQ+ +         +ANL+ A    +         
Sbjct: 237 AKVNYEGALKGYNLVKEIYENPRSLEQQLLNAETQYEVAKANLQIAKANLDQVLMGAEEE 296

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           DL+  +         L +         + SP  G I           A    P++K+V +
Sbjct: 297 DLQSARAQVEQAEVALELANIRLRDSVLESPFPGLIAAVNIN-EGEMAPPGNPVIKVV-N 354

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
               Y   +V+   +  ++ G    V     A++        IE I P +  +       
Sbjct: 355 LDKVYAEIEVSASTVTSLETGDLVRVEILPLANM---SMTGKIETIAPDVDPRSRA---- 407

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             Y V + I      ++   ++ G    V  T K 
Sbjct: 408 --YPVKVVIP-----NSKNMIKGGMYCRVYLTLKE 435


>gi|78042756|ref|YP_360683.1| putative multidrug resistance protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77994871|gb|ABB13770.1| putative multidrug resistance protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 364

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 53/403 (13%), Positives = 114/403 (28%), Gaps = 56/403 (13%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + L+ ++   G   ++ L       +   ++  +  +  I     G +K+ +V+ G ++ 
Sbjct: 11  IVLVIVLLGAGYGIYAYLDSKNYVTTDDAKVTAD--IYSIGGKTGGKVKEVKVQEGDEVK 68

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G  L+ FED       DL K  ++  +  +   +  L  +     V             
Sbjct: 69  AGELLVKFED-------DLAKAQLEQAQAGLSAAQMQLKKVLKGARV------------- 108

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                   +                 +     L   +   QK  
Sbjct: 109 ----------------------EDVNAARALYEQALAGYNGAKESYEQLSKDIDDLQKKY 146

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +K L    A  Q ++  Q   + K   +L+      K  +         A  +    L
Sbjct: 147 DAVKPLLANPATPQ-EVKDQANELLKQIAQLKYQQLAAKTQMNTAQAGVKAAKSKLDLAL 205

Query: 260 KEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
                 D++  +     + + L + +   +   + +P+ G +V              Q  
Sbjct: 206 NGAQLEDVKAVEAQVKAQEAALKLAKLNLDATEVKAPVKGEVVKVWV-KPGEILAPGQAA 264

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ- 377
           + +       Y+ A +  K+I  VK G +  +          K     +E I        
Sbjct: 265 VSLA-DFNNLYVTANILEKEISGVKVGASVKIYVDALG---GKVLSGKVESIGRATQSTF 320

Query: 378 ---DNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFT 416
                +  T  + +V  +I   +   +    L  G    V   
Sbjct: 321 NLFSADSFTGSFTKVSQRIPVKIKLLEKPEGLIPGLSVTVKIK 363


>gi|166364863|ref|YP_001657136.1| ABC-transporter DevB family protein [Microcystis aeruginosa
           NIES-843]
 gi|166087236|dbj|BAG01944.1| ABC-transporter DevB family protein [Microcystis aeruginosa
           NIES-843]
          Length = 408

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/357 (13%), Positives = 116/357 (32%), Gaps = 49/357 (13%)

Query: 44  VSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIET-TDLIDLK 99
           +++ G I     ++ I +P    S  +K+  V+ G  +  G  +   E  E   D +   
Sbjct: 55  ITALGRIEPRTEIISISAPMLLDSDRVKQLLVDEGDSVKTGQIIAILESRERLEDNLRQA 114

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +K     ++  K+                       +  +    +   K+    +  
Sbjct: 115 QEQVKVATAKLEQVKAGAK--------------------VGEIDANAANVRKIEAQWLGD 154

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ------ 213
                         +  +R   +   + L A   + + +    + L+++ A+S       
Sbjct: 155 QATQRTTIQRLTAQLEGDRAAQKATIAKLEAEYRNAKAEFDRYEKLYQEGAISASSFDSK 214

Query: 214 --------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR- 264
                     L + +  + +     ++ I E K  L  I     +   E  + L ++S  
Sbjct: 215 RLNLETSNQQLTEAKVTLERIESTGKQQIEEAKTTLARIESTGQQQIKEAKSTLNQVSEV 274

Query: 265 ---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
              D+   +      +  +   +    Q  I SPI G ++   +          Q ++ +
Sbjct: 275 RGVDVRAAEAEVNAALVAVKKAQTELNQAYIRSPITGKVIKVNTR-IGEQIS-DQGIVDL 332

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
              ++   + A++    I  ++ G TAT+    +      + +  +  I   + QQ+
Sbjct: 333 A-ETERMEVIAEIYQSDIGKIRSGQTATITGSAFK----GEVRGKVRLIALKVDQQN 384


>gi|188589092|ref|YP_001921467.1| putative secretion protein HlyD family protein [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188499373|gb|ACD52509.1| putative secretion protein HlyD family protein [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 352

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/384 (13%), Positives = 111/384 (28%), Gaps = 76/384 (19%)

Query: 41  EISVSSSGEILNEDNVVE----IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           E   ++   ++ + NV      I S   G IK+  V  G  + +G  L T +        
Sbjct: 32  EKIAAAESSLMVQANVSMDESNINSLTGGKIKEVSVNEGDIVKKGQVLATIDS------- 84

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
                                D +  +    E A E+   Q+        +  +K+    
Sbjct: 85  ---------------------DAILVQKQAAEAAIETITAQISSAEAGKRAAEAKLQETK 123

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
             +  + L                       L +     + +   +K L++         
Sbjct: 124 NGTREQQLNQ---------------------LESAYKLAEANYERVKALYDIGG------ 156

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +  +      L  +I++ +           E        + + +  +   Q      
Sbjct: 157 -ETQANLDAVKCNLDSSINQYELAKAGATA---ETIAAVQAQVDQATAGVAAAQGQLKQA 212

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + L  ++ +    T+ SP  G +      S+ +      P+  I    +   I   +  
Sbjct: 213 QASLEQIKVSLGYTTLTSPTDGIVTKINV-SNGDMVSSGMPVAVITETVEP-SITCNIKE 270

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEY----YEVI 390
             +  V+      ++   Y D   K F   + +I  +   + +       ++    Y V 
Sbjct: 271 TNLAKVELNQNVAIKLSAYGD---KVFNGKVVQINKNADFATKKATNDNGDFDILSYGVK 327

Query: 391 LKITDLAFSDNNIELRNGFPAEVL 414
           ++  D    +  I LR G  A V 
Sbjct: 328 VEFED--LDNTEINLRAGMTAFVD 349



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    ++ + +S  +I        + SP  GI+ K  V NG  +  G P+    + 
Sbjct: 204 AAQGQLKQAQASLEQIKVSLGYTTLTSPTDGIVTKINVSNGDMVSSGMPVAVITET 259


>gi|240112228|ref|ZP_04726718.1| putative secretion protein [Neisseria gonorrhoeae MS11]
          Length = 311

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 101/315 (32%), Gaps = 20/315 (6%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSV-YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +Q L        T ++     +  +     +     +  +   +L +  +    +  +  
Sbjct: 2   QQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLHILQQIDGQKRRIRL 61

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++ L   + L   +AVS+ ++   E  + +   +L     E+  +L+ I       NL 
Sbjct: 62  AEEMLRKYRFLSANDAVSKQEMMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ----NLT 117

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +         
Sbjct: 118 LASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQVDP 175

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           S+ L+ IVP     Y    +       +K      +R+  Y   +       +  +    
Sbjct: 176 SKLLLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVAKTA 235

Query: 375 SQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
             +                 +  Y V +K      +       L+ G   E     +   
Sbjct: 236 LGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHEKRR 295

Query: 422 LAQEIIHPITDNWPK 436
           L + ++ PI     +
Sbjct: 296 LYEWVLEPIYSMSGR 310


>gi|78485477|ref|YP_391402.1| secretion protein HlyD [Thiomicrospira crunogena XCL-2]
 gi|78363763|gb|ABB41728.1| Conserved hypothetical protein [Thiomicrospira crunogena XCL-2]
          Length = 371

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/361 (14%), Positives = 113/361 (31%), Gaps = 64/361 (17%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I K  V  G ++ +   L   +D +    +     +    +  +   K+ L  L  +
Sbjct: 69  SGKILKVLVREGDEVKKDQVLAVLDDAQVRAKVTQAAAAYGAAQARLKAAKTGLKVLKKQ 128

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +     ES        L       S V N   + +      +L    +I  ++     
Sbjct: 129 VPLQIATAESTVRHSKAVLN------SAVENAQQAKLDEQRYARLYEKGTIQKHQ----- 177

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                        +   + K + + N  +++  +N+ ++ + ++ L              
Sbjct: 178 ------------HESAALAKKIADDNVLIAKAAINRAQKALNEAKL-------------- 211

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                      +      +++    QN +  A  M  +++ +  +    I +P  G I  
Sbjct: 212 --------GWQQIEAKQDDVNAVKAQNLQAQAALMEAMSVFDDMK----IKAPTNGVITT 259

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                          L  IV  +   Y++  +   ++  V  G  A ++      + E+ 
Sbjct: 260 KLIN-EGEVIASGAGLFDIVNLN-QVYLKGYIAENKVGLVHLGQKAIIKI---DSMPEQD 314

Query: 363 FKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           F A +  I          +QTQ+      Y + L + D    +    +  G PA+     
Sbjct: 315 FPATVRYIASETEFTPKEVQTQDERVKLVYAIKLYLDD----NPKKRITPGLPADAYIQV 370

Query: 418 K 418
           K
Sbjct: 371 K 371


>gi|332702671|ref|ZP_08422759.1| secretion protein HlyD family protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332552820|gb|EGJ49864.1| secretion protein HlyD family protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 402

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 61/384 (15%), Positives = 129/384 (33%), Gaps = 48/384 (12%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            +  +  I S   G + +  V++  ++  G  L+  +  +        +V++   R  + 
Sbjct: 48  VDGRMYPISSRVPGYVTEVLVQDNQRVRAGEVLVRLDPTDY-------EVALAQARAELA 100

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           + ++ L        +      SR   L   +   +   +++     ++    L+ +    
Sbjct: 101 SAQAQLAAGQLNVPLEISQTSSRVSSLRAQIAGTNRQLAELAKAREAARQALLEAQ---- 156

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                             A+L   + D    ++L     VSQ+ L+     V  +   + 
Sbjct: 157 ------------------AVLDKAKLDSMRYESLLASQVVSQSSLDDARTSVVTNQARVA 198

Query: 232 ------ENIHEQKNMLRHINELYDEANLEFANYLKEIS----RDLEQNQRTFADEMSKLT 281
                 E + +Q+  LR  +    EA +E A   ++++    R+ E          +KL 
Sbjct: 199 AAQARLEAVDDQEATLRE-SRKRLEAEMELAGTGRDVADIRAREAEARAAQVTLAEAKLR 257

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQ 340
             E       I SP  G +               Q L+ IVP  +   ++ A     Q+ 
Sbjct: 258 QAELNLAYVQIKSPADGYVTRKAV-EPGRMISAGQSLLTIVPLGQGDIWVTANFKETQLT 316

Query: 341 HVKKGYTATVRFPHYADIREK-KFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT----- 394
           H++ G  A +    Y   +   + ++I+     + S       T  Y +V+ ++      
Sbjct: 317 HMQPGQRAWISVDTYPGAKIPCRVESIMAGTGSVFSLFPPENATGNYVKVVQRVPVKLAI 376

Query: 395 DLAFSDNNIELRNGFPAEVLFTAK 418
           D A +    +LR G         K
Sbjct: 377 DFAMAGELPQLRMGMSVIATILTK 400


>gi|119512589|ref|ZP_01631666.1| hypothetical protein N9414_22298 [Nodularia spumigena CCY9414]
 gi|119462789|gb|EAW43749.1| hypothetical protein N9414_22298 [Nodularia spumigena CCY9414]
          Length = 485

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/359 (13%), Positives = 124/359 (34%), Gaps = 38/359 (10%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +S+SG+++   +V  I     G++ +  VE G ++ QG  L   +  +    I   + ++
Sbjct: 65  ISASGKVVPVQSV-NISPKNPGVLTQLYVEQGDRVSQGQVLARMDVGDIRAQILQNRANL 123

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             ++  +D  ++                 SR +++     +     +++      +  + 
Sbjct: 124 AQVQAQLDQARAG----------------SRPQEIEQAKARLAQAQAQLNQARAGNRSQE 167

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +     ++ S        +++ +  R L          ++    ++  ++  L++ ++ +
Sbjct: 168 IAQAQAQVNSAQAQVTLTQSRVNRYRQLTQQGATSQDQLEQFISEDQRAKASLDEAQKRL 227

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             S LE+     E       + E      L       E   ++ Q Q       +++   
Sbjct: 228 --SLLEVGSRNEEITAREAAVTEARAALVLLQNGSRPE---EIAQRQAAVKAAQAQIQAA 282

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYIRAKVT 335
           E   +   I +P++G +    +     +           S     IV  ++   + A+V 
Sbjct: 283 EVRLQDTVIRAPLSGIVTQKYAN-VGAFVTPTTSASTSASATSSSIVAVARGLEVLAQVP 341

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
              I  +K+G    +    Y D     FK  +  I P    +    Q    ++V + + 
Sbjct: 342 EVDIGRIKQGQQVEIVADAYPDQ---VFKGNVRLIAPEAVVE----QGVTSFQVRVALD 393


>gi|218246664|ref|YP_002372035.1| hypothetical protein PCC8801_1836 [Cyanothece sp. PCC 8801]
 gi|257059706|ref|YP_003137594.1| hypothetical protein Cyan8802_1862 [Cyanothece sp. PCC 8802]
 gi|218167142|gb|ACK65879.1| conserved hypothetical protein [Cyanothece sp. PCC 8801]
 gi|256589872|gb|ACV00759.1| hypothetical protein Cyan8802_1862 [Cyanothece sp. PCC 8802]
          Length = 865

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/446 (12%), Positives = 135/446 (30%), Gaps = 59/446 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVE- 73
           S    T + I+ ++GLI W     +       G +         I++  SG  +  +V  
Sbjct: 445 SAWLNTGVKILLLVGLIIWLS---LPYQTKPGGTLQLLTPRQIDIQAQVSGKSQIIRVMF 501

Query: 74  ---NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
              N   I  GT +   +DI+  + I+     I   +  + + +S LD L          
Sbjct: 502 PGGNEQLIPAGTVIAQMKDIDLENEIETLGAEIDKAKSTLQSRQSDLDKL---------L 552

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              R+E +     +  +  ++V     +       +++T            E +      
Sbjct: 553 ATPRKEDIQVARDQVKAAQTEVETAKKAIAIAQKNLEVT------------EQQIQSALT 600

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
             + + ++   ++  +++ A++ + +   +R      +E +E         + + +   +
Sbjct: 601 EANFYIRETVRLEEGYQEGAIALSLVEDAQRQAETKKIEAQEKRALLLRQQQEVEQARSQ 660

Query: 251 ANLEFANYL------------------KEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                 N                    +    D+   +        +    +   +  T+
Sbjct: 661 LATAQENLQISQSSLELVLSGPYDDDVEAARHDVATARADLERLNKQQRQSQDKLKLTTL 720

Query: 293 LSPIAGTIVYNQSFS-SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + P+ G +V     +    Y +Q      +   +       +V    +     G    V+
Sbjct: 721 VMPLNGYLVTPYLETKVGTYLEQGDTFA-VAEDATSILAEVQVPEYDVGQFSTGKKVAVK 779

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--YYEVILKITDLAFSDNNIELRNGF 409
              Y +         +  I P  S++      +   Y +V+++I           L+ G 
Sbjct: 780 LAAYPNET---ITGKVVAITPSASEETTETSVESGRYLQVLVEIPYSGRI-----LKTGM 831

Query: 410 PAEVLFTAKNTTLAQEIIHPITDNWP 435
                   +   +      P+   + 
Sbjct: 832 TGYAKIEGQTKPMIVAFTTPMVRFFQ 857


>gi|307270176|ref|ZP_07551492.1| bacteriocin secretion accessory protein [Enterococcus faecalis
           TX4248]
 gi|306513487|gb|EFM82103.1| bacteriocin secretion accessory protein [Enterococcus faecalis
           TX4248]
          Length = 465

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/454 (11%), Positives = 152/454 (33%), Gaps = 43/454 (9%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            + H    + +    I+ +     +      E+ + +  +++       ++ P    IK 
Sbjct: 24  SQQHHTFYRWVLYPVILFLCLTGLFLAFAKKEVVIRTPAQLIAP-KTEVLQVPVEAKIKT 82

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             ++    + +G  L+TF+     +     +     +    +  ++ ++ L N+ ++ E 
Sbjct: 83  NTLKENQIVKKGETLVTFDTTSLQNEKKRLEQENTLIEQQKNAAQTFINSLKNEQNLFET 142

Query: 130 A---------------------FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
                                    + E+ +      ++   ++    +++  + L  + 
Sbjct: 143 EDSFGYSNQLKSFFAEKEATIYNSKQIEETIQKEQDIYNKSKELLEKQLTTRQKEL-QEW 201

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            ++R+ ++N  +++  S  + +     Q  L+ +    +K   S   L   +  + +   
Sbjct: 202 EQVRTAWINEQNIQGFSPEITSKYQLWQTQLSDVTEEQKKQTKSTI-LATIDEQIVQQKK 260

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS-------KLT 281
           E+ +   EQ  ++   N   +E N +     +     L   ++   +           L 
Sbjct: 261 EIEQLQAEQAKLVPP-NTSKNEINSQKEKEKQNKELSLATTKQKITELTDTQQKNELALK 319

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPHSKLTYIRAKVTPKQI 339
            + +   Q T+ +PI GT+  N++  +     +   L +I   P +      A +   + 
Sbjct: 320 TINEQITQSTLKAPITGTVHLNETVKNQLEIPKGTTLAEIYPKPKNSFLTFTALIPANES 379

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +K G T   +      +  K     + +I     +     +   +Y +      L  +
Sbjct: 380 MRIKSGMTVHFKLDK-KGVATKIIDGTLNEIS----ENSTTTEQGTFYTIK----GLLNA 430

Query: 400 DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
             +   R G   E+       T  Q++   + + 
Sbjct: 431 PEDFTSRYGLTGELSLVIGKKTYWQQLKDILFNQ 464


>gi|291279019|ref|YP_003495854.1| multidrug-efflux transporter MFP family [Deferribacter
           desulfuricans SSM1]
 gi|290753721|dbj|BAI80098.1| multidrug-efflux transporter, MFP family [Deferribacter
           desulfuricans SSM1]
          Length = 377

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 63/411 (15%), Positives = 137/411 (33%), Gaps = 50/411 (12%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK-SPFSGIIKKFQVE 73
             +  + L+  + +     ++ L+ I+   +S    +  D +  +      G I K   +
Sbjct: 5   KKIALILLVIGLMVFVYFAYNYLVFIKEYATSDAVFIRSDKITNVSFKRVGGKIIKMYKK 64

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +G  +   + I+     D     I++L    +     +  + ++ D+ +   E 
Sbjct: 65  EGDIVKKGEVIAEIDPIDYKIKYDQVAKKIESLNKKREQLNIQIIKVKDELDLKKNIGEK 124

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +   L D                                        L+   + L   + 
Sbjct: 125 KITYLDD------------------------------------EIKSLKYSIAELNQNIK 148

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             ++D    K+L+E  AVS+      E  +     + +  + + + + +  +   DE  +
Sbjct: 149 QLKRDYKRFKSLYEAKAVSKRKFEDIETNLLALQKKKKSLLSKLEGLKKQKSVAEDELKM 208

Query: 254 EFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +  Y    E+ + LE      A    +L  LE   E   + +P  G I   +       
Sbjct: 209 VYVEYKNVDELKKSLESLDSEIAATKKQLQDLENLIEYCKLKAPFDGKI-GKKFVEEGAI 267

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                P+  +V  +   Y+   +   +++ VK G  A      Y DI    FK  +++I 
Sbjct: 268 INSGFPVYSVV-DTDSLYVEVLLEETKLKGVKPGCEAEFSVDSYPDIT---FKGEVKEIY 323

Query: 372 PIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFT 416
           P  +        ++   E+ +V  +I      D   +  L+ G   E+   
Sbjct: 324 PASAATYALVPRDISAGEFTKVAQRIPVRVSIDEGDKSILKVGMGGEIKIK 374


>gi|167468563|ref|ZP_02333267.1| type I secretion membrane fusion protein, HlyD family protein
           [Yersinia pestis FV-1]
 gi|229894938|ref|ZP_04510116.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis Pestoides A]
 gi|229897680|ref|ZP_04512836.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229898325|ref|ZP_04513472.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229902185|ref|ZP_04517306.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis Nepal516]
 gi|270490657|ref|ZP_06207731.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294503717|ref|YP_003567779.1| ABC associated RTX toxin transporter, HlyD/MFP family [Yersinia
           pestis Z176003]
 gi|229681081|gb|EEO77176.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis Nepal516]
 gi|229688615|gb|EEO80684.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Orientalis str. India 195]
 gi|229694017|gb|EEO84066.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229702033|gb|EEO90054.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis Pestoides A]
 gi|262362163|gb|ACY58884.1| ABC associated RTX toxin transporter, HlyD/MFP family [Yersinia
           pestis D106004]
 gi|262365496|gb|ACY62053.1| ABC associated RTX toxin transporter, HlyD/MFP family [Yersinia
           pestis D182038]
 gi|270339161|gb|EFA49938.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294354176|gb|ADE64517.1| ABC associated RTX toxin transporter, HlyD/MFP family [Yersinia
           pestis Z176003]
 gi|320014917|gb|ADV98488.1| putative ABC associated RTX toxin transporter,HlyD/MFP family
           [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 122

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 13/119 (10%), Positives = 30/119 (25%), Gaps = 1/119 (0%)

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M +VP      +   +  K +  V  G    V+   +   R       ++ +     +  
Sbjct: 1   MVLVPEDYQLELDVMILNKDVGFVLPGQAVEVKVDSFPYTRFGTLSGEVKHVSRDAMEDQ 60

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
                     + L    L      + L  G             +   ++ P+     + 
Sbjct: 61  QRGLVFP-ARIRLLSDTLMVEGKPVRLSAGMAINAEIKTGRRRVIDYLLSPLQQYQSEA 118


>gi|310829123|ref|YP_003961480.1| bacteriocin ABC transporter [Eubacterium limosum KIST612]
 gi|308740857|gb|ADO38517.1| bacteriocin ABC transporter [Eubacterium limosum KIST612]
          Length = 373

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 90/270 (33%), Gaps = 8/270 (2%)

Query: 164 LKMKLTRMRSIYLNRLDLENKS-SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            K ++    +I  NR+ L ++  S L+   ++   + ++    + + AV  +   +Q+  
Sbjct: 101 QKQQIEGQIAITDNRIQLLSRLESNLKYGTNTFDPNDSVEAEFYNRIAVMDSSQAEQQLS 160

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEF-ANYLKEISRDLEQNQRTFADEMSKLT 281
           + +   EL +        ++   + Y     +     L E +++  Q Q        +  
Sbjct: 161 IDQINDELMKKQGMTDEQIQQYKDTYLNKQQQIFDQTLAEATKEKAQYQAERDKLQVQSD 220

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
            LE  + + TI +PI G +      +     Q    +  +       Y    ++      
Sbjct: 221 TLETGKNEYTITAPITGVLHTTIPVADGMVIQAGSAIATLS-GKDNLYFETSISSSDRSK 279

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL---AF 398
           +  G    +      +      K  +  ID   + Q+ +     Y++  ++         
Sbjct: 280 IDIGDPVEIAVNGLLETEFGTLKGKVTDIDADATIQEKD--GNIYFKAKVQPDANCLFDK 337

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            +  + L +G  AEV       +     + 
Sbjct: 338 KNQPVYLTSGMTAEVRVKYDKISYYNYFLD 367


>gi|225874988|ref|YP_002756447.1| transporter, MFP family [Acidobacterium capsulatum ATCC 51196]
 gi|225791319|gb|ACO31409.1| transporter, MFP family [Acidobacterium capsulatum ATCC 51196]
          Length = 413

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 56/415 (13%), Positives = 136/415 (32%), Gaps = 38/415 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +NL+           +++I+ I G + W      E +  +      + N+++I S  SG 
Sbjct: 22  ENLRPKSRKRFILFGVIAIVLIGGGLYWWHSTFYENTDDAQ----IDGNIIQISSRISGH 77

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +   +V+    + +G  L+  +  +    +   +  + +   + +     +   +     
Sbjct: 78  VLNVEVQQNQSVKKGEILVELDPTDYETAVKQDEADLASAEANYEAATVNVPITHVSTSS 137

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
              + ++      D + +            +S+     K KL   R   L + D+ ++  
Sbjct: 138 TLSSADATVLSARDSVAQAERQLQAARAQVLSAQANYTKAKLDLKRYTSLVQKDVISRQQ 197

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              A+ ++      + +        ++ D+   +  V  +  ++ +     +N      +
Sbjct: 198 YDAAVATATADQAAVQQ--------AEADVQAYQAAVSVAHAKVAQAQASYRNAQTGPRQ 249

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +   A  +           L +          KL   +       I +P +G +   +S 
Sbjct: 250 V---AIQKAKADQAAAQVKLAEA---------KLQQAKLNLSYCIIRAPESGIVTT-KSV 296

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                    Q +  +V      ++ A     Q+ ++K G   T+    Y     K+F   
Sbjct: 297 EVGQNVSIGQNMATLVSLDN-VWVTANFKETQLDNMKVGQPVTISVDAYG---GKQFDGK 352

Query: 367 IEKI----DPIISQQDNNLQTQEYYEVILKIT-----DLAFSDNNIELRNGFPAE 412
           + +I      ++S       T  Y +V+ +I           D +  LR G   E
Sbjct: 353 VTEIGGATGSMLSLFPPENATGNYVKVVQRIPVRIDFTNPSQDKDHMLRPGMSVE 407


>gi|152991464|ref|YP_001357186.1| efflux system, membrane fusion protein [Nitratiruptor sp. SB155-2]
 gi|151423325|dbj|BAF70829.1| efflux system, membrane fusion protein [Nitratiruptor sp. SB155-2]
          Length = 385

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 114/308 (37%), Gaps = 43/308 (13%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+K  V +GS++ +G  +   +  E        ++ I+  +                 
Sbjct: 57  GRIQKIFVHDGSKVEKGQVVAILKSPELQAQKREIQMLIQAKKAE--------------- 101

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +KA E + E                     +S+  +++  L    +    +  L+ K
Sbjct: 102 ---QKATEVQREI------------------AQASLPENVRKALYAKEAKGFAKAQLQKK 140

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               + ++   +KDL  ++NLF+++ + ++ L + +  + K    L+    ++K ++  +
Sbjct: 141 IDTFQQVVIQDKKDLLRLQNLFQQHLIPKHKLEEAQLKLTKDKNILKALQEQKKEVVSAL 200

Query: 245 NELYDEANLEFANYLKEISRD--LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                  +   ++  K    D  ++  +++     +K   +E   ++ T+ SP+ G +  
Sbjct: 201 KAAQSTLDQARSDLKKITMLDYTIDALRKSIDSLEAKKMQIEAMIDELTLRSPVDGYVTQ 260

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +          ++ ++   K  Y+   V       +K G  A +    Y +     
Sbjct: 261 -KIANPGEVLGAGMSVVHLI-DPKTLYLEIFVDTIHTGKIKVGDKAEIFLDAYPNR---P 315

Query: 363 FKAIIEKI 370
            +A + +I
Sbjct: 316 IEAYVARI 323


>gi|116071588|ref|ZP_01468856.1| hypothetical protein BL107_05549 [Synechococcus sp. BL107]
 gi|116065211|gb|EAU70969.1| hypothetical protein BL107_05549 [Synechococcus sp. BL107]
          Length = 256

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 83/259 (32%), Gaps = 33/259 (12%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +  +L   L+   + L+    L    A S+  L  Q+  V ++   L            
Sbjct: 4   AEVQMLENNLALQAEILSRYVQLKAAGAFSEVQLLTQKNTVEETRGRL------------ 51

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                  +A       L  + + + Q     AD  S+L     T   + + SP+ G +  
Sbjct: 52  ------MQARANRLRQLALLDQQMAQLNSEVADISSRLAQARVTLRYQQLKSPLDGVVFD 105

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK--G--------YTATVRF 352
            Q  S+   AQ ++ +MK+VP         +V   +I  VK   G          A +  
Sbjct: 106 LQPTSAGYTAQSTETVMKVVPFGS-LEASVEVPSNKIGFVKVPAGCPKQLVNCMNADISI 164

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-YYEVILKITDLAFSDN---NIELRNG 408
             Y           + +I       +   Q QE  Y V +K+            + L+ G
Sbjct: 165 DSYPATDFGILPGKVTRIGSDALAPNPQEQRQELSYPVTVKLIQQQLQMKSGVKLPLQVG 224

Query: 409 FPAEVLFTAKNTTLAQEII 427
                    +  +  Q ++
Sbjct: 225 MSLTANIKLRKVSYLQLLL 243


>gi|255533230|ref|YP_003093602.1| secretion protein HlyD family protein [Pedobacter heparinus DSM
           2366]
 gi|255346214|gb|ACU05540.1| secretion protein HlyD family protein [Pedobacter heparinus DSM
           2366]
          Length = 390

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/399 (12%), Positives = 118/399 (29%), Gaps = 67/399 (16%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
            +   ISV S+G + +     E+  P +G +   ++++  +I QG  LL  +        
Sbjct: 46  FIKTSISVKSAGILQSSIEKTELTVPANGRVITLKLQDNQKIKQGETLLVIDAALAKQQG 105

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           ++ +     L   +      L ++N                                   
Sbjct: 106 NIVQNRQAQLSAFLQDIHLLLVYINRNGYSYPPL-------------------------- 139

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                        +      +      +    R   +  +   +    LF+  A+++++ 
Sbjct: 140 -------------QTGQYTASWQQFAQELESARIAKTQAENTFSRYNRLFQNKAITESEY 186

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              +  + ++   L+                     +  + Y  +   +    +      
Sbjct: 187 EHYKFELQQAESALK---------------------MICSKYRSQWQTEASSLRNELQQL 225

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
             +   L + ++  T+ +P+ G++          Y   +Q + +I P +        V P
Sbjct: 226 SGQQVELNEQKKLYTLKAPVDGSVQNLTGIKEGAYVFANQKIGEISP-NADLTAFCYVKP 284

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             I  +K G     +   Y   +    K  +  I   I   +N+   Q  ++V   ++  
Sbjct: 285 SDIGLIKVGQEVRFQIDAYNYNQWGLAKGTVLDISDDIIVINND---QPVFKVKCALSQN 341

Query: 397 AFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
                N     L+ G      FT    +L Q +   I D
Sbjct: 342 HLLLKNGYKGYLKKGMSFTARFTVTERSLYQLLYDKIDD 380


>gi|186682490|ref|YP_001865686.1| cyclic nucleotide modulated ABC exporter membrane fusion protein
           [Nostoc punctiforme PCC 73102]
 gi|186464942|gb|ACC80743.1| cyclic nucleotide modulated ABC exporter membrane fusion protein,
           DevB family [Nostoc punctiforme PCC 73102]
          Length = 980

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/381 (13%), Positives = 123/381 (32%), Gaps = 61/381 (16%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V + G +     ++ +  P    I   +V  G  +  G  L   E         L+  ++
Sbjct: 642 VIALGRLEPAGEIISVAGPVGERIGHLEVAEGDNVKNGQILAYLESYNER----LQTRNL 697

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +     E+   D L  + +                                S + + 
Sbjct: 698 AAAKVREIQEQIKTDTLLRQVEA---------------------------EKSQSEIEQV 730

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
              +L +++S        E + S +       Q        L ++ A+++ D + ++ IV
Sbjct: 731 NTPQLLQIKSQQALIRKAEVELSEVVKTRDRFQY-------LSQEGAIAKQDFDNKQLIV 783

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEAN--LEFANYLKEISRDLEQNQRTFADEMSKLT 281
            ++     EN+++ K  L  + +         + A    +++     +        + L 
Sbjct: 784 RQAE----ENLNQAKATLEQLAQARSSNIRTAQTAFKASQVNLARVDSHSGLEPAKNNLA 839

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           + +   E+  I +P  G ++   + +      Q + ++++   ++  +  A+V    +  
Sbjct: 840 LGQAQLERSIIRAPQDGKVLKVFAHT-GEAISQ-KSILQLG-DTQQMFAVAEVYETDVSK 896

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS------QQDNNLQTQEYYEVILKITD 395
           VK G  A +  P +     K  K  ++K+  ++             +     EV +++  
Sbjct: 897 VKFGQEAVITSPAF----TKPIKGTVDKVGNLVFKNNTIGDDPTAEKDARIVEVKIRLQQ 952

Query: 396 LAFSDNNIELRNGFPAEVLFT 416
                N   L      +V   
Sbjct: 953 SEQVANFSNL----QVDVRIQ 969


>gi|302390398|ref|YP_003826219.1| efflux transporter, RND family, MFP subunit [Thermosediminibacter
           oceani DSM 16646]
 gi|302201026|gb|ADL08596.1| efflux transporter, RND family, MFP subunit [Thermosediminibacter
           oceani DSM 16646]
          Length = 416

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 56/374 (14%), Positives = 116/374 (31%), Gaps = 79/374 (21%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G+++       + S  +G I K  VE G Q+  G  L               +  +K L
Sbjct: 49  EGQVIPAVEY-SVHSLQAGEIVKLNVEEGQQVKAGDILALLNS-------KELEFQLKQL 100

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  + + +                                   +K F   + S  +S ++
Sbjct: 101 QAELKSLRGE--------------------------------EAKAFQKPLDSEIKSQEL 128

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
            + + R                   L+  + D   M+ L+ + AV+  +      ++  +
Sbjct: 129 LVEQARHD-----------------LTILENDFKRMEKLYSEGAVTLKEYENARNMMETA 171

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            + L+      K +L        E+   ++                     S++ +L+  
Sbjct: 172 KINLQRQQEALK-LLYESRNPTGESRQYYS--------------GRAEALQSQIDLLKYR 216

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            E+  I SP+ G +         +       LMKI        +   V       +  G 
Sbjct: 217 IERCRITSPVDGIVADLTV-KQGDVVNPGSRLMKIF-QKGEYLVEVFVPADSAPDIADGM 274

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              V+           F  ++EK+ P   ++ ++L  +   E  +K+T    +  N++L 
Sbjct: 275 K--VKLIQERKSENLIFDGVVEKVAPTAVEKISSLGLE---EQRVKVTVKPLAPQNLQLI 329

Query: 407 NGFPAEVLFTAKNT 420
            G   +V FT    
Sbjct: 330 PGTVLDVEFTTDKR 343


>gi|10956845|ref|NP_049065.1| putative aromatic efflux pump membrane protein [Novosphingobium
           aromaticivorans]
 gi|146275512|ref|YP_001165673.1| efflux pump membrane protein [Novosphingobium aromaticivorans DSM
           12444]
 gi|3378278|gb|AAD03861.1| putative aromatic efflux pump membrane protein [Novosphingobium
           aromaticivorans]
 gi|145322203|gb|ABP64147.1| efflux pump membrane protein [Novosphingobium aromaticivorans DSM
           12444]
          Length = 381

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/416 (11%), Positives = 120/416 (28%), Gaps = 61/416 (14%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R    ++    L  ++ ++ L   +  + +  +  S+        + ++    +G   + 
Sbjct: 19  RKARRTMWLKRLAIVLAVVALAWGAWYVLVARNYVSTDNAYVNARMAQVTPLIAGSAIEV 78

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            VE+  Q+  G  L+  +       +   +  +   R       +    L+ + D     
Sbjct: 79  LVEDTQQVKAGDVLVRLDQANAKIAVAQAEADLAAARRKFGQAVATNSALSAQIDTSSAG 138

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                 +L     ++                                R+DL  + +++  
Sbjct: 139 LVQARARLRTAESEFDKA-----------------------------RIDLRRREAVI-- 167

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                              A+S  +L Q  +    +       +   +  +  +      
Sbjct: 168 ----------------ASGAISGEELTQARKAYASANA----ALEAARGGISEVTSARRV 207

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           A  + A     +               ++L       ++  I +P++G +   Q      
Sbjct: 208 AQGQLAANDALVRGSSVDTDPAVQAAKARLDAALLDLQRTEIRAPVSGVVSRLQI-QVGQ 266

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY--ADIREKKFKAIIE 368
                Q +M IVP     Y+ A     Q+  V+ G   T++   Y    +   K   +  
Sbjct: 267 RLSPGQTIMTIVPID-KLYVDANFKEGQLGRVRPGMAVTLKSDLYGGDVVYHGKVTGLAG 325

Query: 369 ------KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                  I P  +   N ++T +   V +++       + + +      E+  + +
Sbjct: 326 GTGSSMAIIPAQNATGNWIKTVQRLPVRIELDPAELRKHPLRVGLSMEVEIDVSGE 381


>gi|119511982|ref|ZP_01631079.1| Secretion protein HlyD [Nodularia spumigena CCY9414]
 gi|119463402|gb|EAW44342.1| Secretion protein HlyD [Nodularia spumigena CCY9414]
          Length = 479

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/382 (14%), Positives = 137/382 (35%), Gaps = 50/382 (13%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSG-----IIKKFQVENGSQILQGTPLLTFEDIETT 93
           P+  S+S+ G +  +  V+++ +P +G      ++K  V  G ++ +G  +   ++ +T 
Sbjct: 58  PLTNSISAVGRLEPKGEVLKLSAPAAGLQSSSRVQKIFVSEGERVKKGQMVAILDNHDTQ 117

Query: 94  -DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +++  K  ++  R ++   K            +    +++     D      +  +  
Sbjct: 118 LAIVEEAKARLQEARANLAQVKLGSPRDIEAQTAVIARLQAQLNGERDAQQATIARIAAQ 177

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            +    ++  ++      +R     +  L+   + ++A   + Q D      L+ + A+S
Sbjct: 178 LSGEKLALQATVNRLEAELRG---QKDSLKATIARIQAEQRNAQVDAGRYDMLYREGAIS 234

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN--- 269
           Q + +++         ++ E+    + +   + +   EA       L  + + L +    
Sbjct: 235 QQERDRRRLSAVTFNQQVIESQATLQQVQATLRQQLAEARANQVKTLATLQQQLVEARVN 294

Query: 270 --------QRTFADEMSKL-------------------------TILEKTREQKTILSPI 296
                   Q    +E ++L                            E   +   + +PI
Sbjct: 295 RDKTMMTLQSQINEEQARLSRIKEFRPTDIQRGEAQVSNAIANVKRAEAELKLSYVQAPI 354

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           AG I      + S  A  +  + +I   +++T I A+V    I  V+ G TAT+      
Sbjct: 355 AGEI--LAVHTQSGEAISTNGIAEIGETNQMTVI-AEVPEDTIAQVRIGQTATI--TSEN 409

Query: 357 DIREKKFKAIIEKIDPIISQQD 378
                +    + +I   I ++D
Sbjct: 410 GAFIGELNGTVTEIGRKIGKKD 431


>gi|206889298|ref|YP_002247970.1| multidrug resistance protein A [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741236|gb|ACI20293.1| multidrug resistance protein A [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 364

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 100/297 (33%), Gaps = 32/297 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E L++     +    K     ++++Y  L+   + +          E       A     
Sbjct: 80  EPLVEIETDDYLADVKAKRENVNTLYNQLQEISSSLNEAMAKLKTAEANLQAAHAQRVLA 139

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +K+   +K L+E++ VS++           +   L+  I +++     I E+    N   
Sbjct: 140 EKEYQRIKGLYEEDLVSKSR-------FDSAEASLKVAIAQERAAESQIKEVKSTINT-- 190

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                  +  L+  Q        +L I E   ++  I SP  G I   +S     Y +  
Sbjct: 191 ------FTVKLKTQQHLIGKAQEELKISEINLKRTLIFSPRDGRIAK-KSVEVGQYVRPG 243

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK----ID 371
           Q +M +V   +  ++ A     QI+ ++ G    ++   Y     K FK  +        
Sbjct: 244 QLIMAVV-DEQDIWVGANFKETQIEKMRVGQPVRIKVDAYP---GKIFKGHVASFQPGTG 299

Query: 372 PIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFP----AEVLFTAKNT 420
            + S       T  + +V+    ++I   +  + +  L  G       +V       
Sbjct: 300 AVFSLFPPENATGNFVKVVQRIPVRIIVDSPFEPDYPLWPGMSVIPYVDVTVNTGAK 356



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 81/221 (36%), Gaps = 22/221 (9%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWS-------ILLPIEISVSSSGEILNEDNVVEIKSP 62
           +R   +   ++ +L ++ +  LI  S       +    + +    G I+       I   
Sbjct: 8   ERFKNSKKIKIAILIVVAVGALIFMSKEIYYYIVYERTDDAYI-EGTIVP------ISPQ 60

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG + K  V+   ++ +G PL+  E  +    +  K+ ++  L   +    S+L+    
Sbjct: 61  VSGKVSKVYVDYNQRVKKGEPLVEIETDDYLADVKAKRENVNTLYNQLQEISSSLNEAMA 120

Query: 123 KYDVLEKAFESREEQLLDFLGKYHS-----TCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           K    E   ++   Q +    +Y           V      S   SLK+ + + R+    
Sbjct: 121 KLKTAEANLQAAHAQRVLAEKEYQRIKGLYEEDLVSKSRFDSAEASLKVAIAQERAAESQ 180

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
             ++++  +     L + Q  +   +   +   +S+ +L +
Sbjct: 181 IKEVKSTINTFTVKLKTQQHLIGKAQEELK---ISEINLKR 218


>gi|310641869|ref|YP_003946627.1| protein [Paenibacillus polymyxa SC2]
 gi|309246819|gb|ADO56386.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
          Length = 486

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 116/363 (31%), Gaps = 61/363 (16%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+ G ++ +G  L   +  E    I     S++  +  +   +            
Sbjct: 91  LAAVNVKAGDKVKKGQVLALLDSSEIKMQIQSASDSLEISKAKLAELEKG---------- 140

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                  ++      ++V R+     T   S  L   + + K+S
Sbjct: 141 ---------------------PKAEDIEIQKTNVLRAKMAVDTAQESFELEEAESQKKAS 179

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +  L   +K     K L +  AVS ++L Q E+ + K+  +      + + ++     
Sbjct: 180 --QKQLEQARKAYEDQKFLHDAGAVSNSELEQAEQALDKAQTDYDNLDLQFRKIISQKRR 237

Query: 247 LYDEANLEFANYLKEISR--------DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
              EA + +   L E+ +         ++ ++       ++L   +    +  + +P  G
Sbjct: 238 TISEAEIGYRAALAELRKTQVPADASSIQSSRIEVRRLATELEQKKNELNKLQVTAPWDG 297

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIV---PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            I+             S     IV     S    +  KV+   I  VKKG +A +    Y
Sbjct: 298 VILKVN-----GDVGTSPTAPFIVMNNSDSNDLKVVVKVSQNDIVKVKKGLSAVLTTNAY 352

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                + F   ++ + P  S  +          +   + +L+  D   +L+ G    V  
Sbjct: 353 P---GESFPGKVQFVSPEASTDEG---------MTTYLMELSVHDPKGKLKTGMIMNVAV 400

Query: 416 TAK 418
              
Sbjct: 401 ILG 403


>gi|326792015|ref|YP_004309836.1| efflux transporter RND family, MFP subunit [Clostridium lentocellum
           DSM 5427]
 gi|326542779|gb|ADZ84638.1| efflux transporter, RND family, MFP subunit [Clostridium
           lentocellum DSM 5427]
          Length = 479

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 123/392 (31%), Gaps = 65/392 (16%)

Query: 49  EILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +I +   +  + S       S  I     E G  + QG  +L  +               
Sbjct: 56  KISSSGKLKAVDSQTVYLDASNKIITINKEVGDTVKQGEVILVLDQ-------------- 101

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                  + E S+           +K  E+ E QL+      +          I S   +
Sbjct: 102 -------EAELSS-----------QKNLEALEAQLVAAKESLNQLLGAASKGDILSAQAT 143

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L       +    +  + +   S L   L   + DL + + LFE  A+SQ DL+  +  V
Sbjct: 144 LTQLKNNRKDTETSITNKKVDLSNLEKDLKQAETDLKVNEELFEAGALSQKDLDDSKDKV 203

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYL------------KEISRDLEQNQR 271
                 L++NI + K  +  +     + +L+                     + +   + 
Sbjct: 204 TT----LKQNIDQMKTAIISLESSLKQMDLQIETAQYNLDLLNNKVEDSNKKQQIASAEG 259

Query: 272 TFADEMSKLTILEKTREQ--KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                 S++   +   +    ++++PI G I Y               ++ IV       
Sbjct: 260 QIKSLESQIYTAKNNLQNTSTSVVAPINGVITYLPE-EEGMPVTAGSKILTIV-DPSKLE 317

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   ++P     ++ G  A ++   Y   +  +    + K+  +   + ++        V
Sbjct: 318 VTCDISPYYAADLRVGLDAVIK---YTGSKTIEVAGKVAKVAAVADVKQSSSGETVSLPV 374

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +++T          ++ GF  +V       T
Sbjct: 375 KVEVTQP-----GEVIKPGFSVDVKIITDTRT 401


>gi|310642452|ref|YP_003947210.1| efflux transporter, rnd family, mfp subunit [Paenibacillus polymyxa
           SC2]
 gi|309247402|gb|ADO56969.1| Efflux transporter, RND family, MFP subunit [Paenibacillus polymyxa
           SC2]
          Length = 488

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 137/400 (34%), Gaps = 63/400 (15%)

Query: 42  ISVSSSGEI----LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             V   G I    +     V I     G + +  V+ GS++ +G  L   +D        
Sbjct: 44  QGVIGQGNIYTGTVTPSETVNIVPKVGGKVVELPVDIGSEVKKGQVLFKLDD-------- 95

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                 K++R ++   ++A           + + ES   Q    L +  S   +     I
Sbjct: 96  ------KDMRNNVAKARAAAAAAAAGVSTAQASHESTMVQATSGLVQSKSGVIQS-QSAI 148

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +    ++    T +     +     N     +  L+  QK++T  ++LF+  A +Q  L 
Sbjct: 149 NQAQGAINQATTAVEQATHSVSSAANTVKQTQQALADAQKNVTRTQSLFDAGASTQAQLE 208

Query: 218 QQERIV-----------------YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           Q +  V                     +  ++ +   +N        Y  AN  ++N   
Sbjct: 209 QAKTAVVNAEAAYNNAQNAQANAKDQLIAAQKALTTARNSYESAKNSYSNANSGYSNAQN 268

Query: 261 EI-----SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           ++     +  +E +Q++       + I +   +   + SPI G IV  ++          
Sbjct: 269 QLKVSQNTAGIESSQQSLKQAQLNVNIAQDALDDTVVTSPING-IVGTKNAEVGEMVSAQ 327

Query: 316 QPLMKI--VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            P + I  +           V  +QI +VK G    VR      +        ++ + P+
Sbjct: 328 SPALVIANLSTVNTLI---YVPAEQINNVKAGDKVQVRVAASNIVTT----GTVKNVSPL 380

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            +           Y V + +     ++ +++L++G  A++
Sbjct: 381 DASGKG-------YPVKISV-----ANPDMKLKSGMLADI 408


>gi|256421857|ref|YP_003122510.1| secretion protein HlyD [Chitinophaga pinensis DSM 2588]
 gi|256036765|gb|ACU60309.1| secretion protein HlyD [Chitinophaga pinensis DSM 2588]
          Length = 454

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/354 (13%), Positives = 119/354 (33%), Gaps = 34/354 (9%)

Query: 37  LLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
            LP   ++   G +     ED    +++   G I+++ V  G ++ +G  +L   +   +
Sbjct: 50  FLPWRQTIPGKGTVTALRPEDRPQTVQNQIGGRIERWAVREGQEVKKGDTILVISETSQS 109

Query: 94  DLIDLKKVSI-KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS-- 150
                  + + + L     +E +AL  ++     ++        QL     K H + +  
Sbjct: 110 YFDPELPLRLDEQLEAKKGSEAAALQKMDATNAQIQALGSGLRYQLSAAENKVHQSENYV 169

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K+ +  + +V    +    R++       +       L +L     + L + ++      
Sbjct: 170 KIDSADLVAVQNFYETSKARLQRYESGYKN------GLFSLTDIETRRLKLQED------ 217

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             Q  +  Q+  +  S   L   + +  N+     E   +A  + ++ L          +
Sbjct: 218 --QAKVIGQQNKLNNSKQALLNALIDLDNIKAKYQESLAKAQSDMSSALS----SRASVR 271

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A   + ++ +   R    + +P  G +V           ++ + +  + P       
Sbjct: 272 GEIAKLRNDISNISIRRALYIVRAPQDGFVVKTLKAGIGENIKEGESIATLQPLHPQVAA 331

Query: 331 RAKVTPKQIQHV---------KKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
              V    +  +          +G+  +V+F  +  +    F   +  ID + S
Sbjct: 332 ELYVNAMDVPLILDTSDVRLQFEGWP-SVQFSGWPSVAVGTFAGKVWAIDRVSS 384


>gi|240013439|ref|ZP_04720352.1| putative secretion protein [Neisseria gonorrhoeae DGI18]
 gi|240015879|ref|ZP_04722419.1| putative secretion protein [Neisseria gonorrhoeae FA6140]
 gi|240117256|ref|ZP_04731318.1| putative secretion protein [Neisseria gonorrhoeae PID1]
 gi|240120510|ref|ZP_04733472.1| putative secretion protein [Neisseria gonorrhoeae PID24-1]
          Length = 311

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 100/315 (31%), Gaps = 20/315 (6%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSV-YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +Q L        T ++     +  +     +     +  +   +L +  +    +  +  
Sbjct: 2   QQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLHISQQIDGQKRRIRL 61

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++ L   + L   +AVS+ +    E  + +   +L     E+  +L+ I       NL 
Sbjct: 62  AEEMLRKYRFLSANDAVSKQETMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ----NLT 117

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +         
Sbjct: 118 LASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQVDP 175

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           S+ L+ IVP     Y    +       +K      +R+  Y   +       +  +    
Sbjct: 176 SKLLLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVAKTA 235

Query: 375 SQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
             +                 +  Y V +K      +       L+ G   E     +   
Sbjct: 236 LGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHEKRR 295

Query: 422 LAQEIIHPITDNWPK 436
           L + ++ PI     +
Sbjct: 296 LYEWVLEPIYSMSGR 310


>gi|270294402|ref|ZP_06200604.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270275869|gb|EFA21729.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 436

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 53/425 (12%), Positives = 139/425 (32%), Gaps = 38/425 (8%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
               L  I+ ++ +  W    P   ++++   +  E+    + S  +G +    V+NGS 
Sbjct: 32  GITVLAVILLMVLVGCWIFRYP--DTLAAEVTLATEEPPAFVLSHATGKLDTLYVKNGSS 89

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +   T L    +   ++ + L K  +K                +  +    + F  R  Q
Sbjct: 90  VEADTDLGVIGNAACSEDVRLLKKWMKAWETQ-----------DYDWQKGVELFIGRRWQ 138

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L +    + +  + +  Y   + +  L     ++R          +   L         K
Sbjct: 139 LGELQSAFAAFITSLTEY---ARFMELDYYARKLRFQEKQLGGQRSYLRLAEREYELIDK 195

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D+ + ++++ ++++             +S     +++  ++ +   + +   +      N
Sbjct: 196 DIKLAESMYIRDSILYVRKAMIAAEFEESGSRYLQSLRSKEEVRMSLLQAEMQLVQHEEN 255

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT----ILSPIAGTIVYNQSFSSSNYAQ 313
            L    +  ++ Q    D  + +  L            + SP+ G + +   +S +   +
Sbjct: 256 MLDIRKQAYDEEQSRRTDLKNAIGQLAAQLSAWEHSYLLKSPVRGKVTFMTVWSRNQNVK 315

Query: 314 QSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             + +  I P      + +A +  +    V  G    +R  +Y D      K  +  I P
Sbjct: 316 AGETVFTIQPSDSSRVLGKALLPLQGSGKVHVGQRVHIRLNNYPDQEFGYVKGQVASISP 375

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA------EVLFTAKNTTLAQEI 426
                      +  Y V + + D   ++   +L    P              +  + + +
Sbjct: 376 -------APTEEGMYIVEITLPDGMQTNYGKQL----PVSRELKGTADIILADKNVLERL 424

Query: 427 IHPIT 431
           + P+ 
Sbjct: 425 LAPLR 429


>gi|239998255|ref|ZP_04718179.1| putative secretion protein [Neisseria gonorrhoeae 35/02]
          Length = 311

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 100/315 (31%), Gaps = 20/315 (6%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSV-YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +Q L        T ++     +  +     +     +  +   +L +  +    +  +  
Sbjct: 2   QQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLHISQQIDGQKRRIRL 61

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++ L   + L   +AVS+ ++   E  + +   +L     E+  +L+ I       NL 
Sbjct: 62  AEEMLRKYRFLSANDAVSKQEMMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ----NLT 117

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +         
Sbjct: 118 LASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQVDP 175

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           S+  + IVP     Y    +       +K      +R+  Y   +       +  +    
Sbjct: 176 SKLFLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVAKTA 235

Query: 375 SQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
             +                 +  Y V +K      +       L+ G   E     +   
Sbjct: 236 LGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHEKRR 295

Query: 422 LAQEIIHPITDNWPK 436
           L + ++ PI     +
Sbjct: 296 LYEWVLEPIYSMSGR 310


>gi|218439059|ref|YP_002377388.1| ABC transporter [Cyanothece sp. PCC 7424]
 gi|218171787|gb|ACK70520.1| ABC exporter membrane fusion protein, DevB family [Cyanothece sp.
           PCC 7424]
          Length = 428

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 56/378 (14%), Positives = 124/378 (32%), Gaps = 41/378 (10%)

Query: 44  VSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIE-TTDLIDLK 99
           V++ G +  E  VV I +P       + +  V+ G ++  G  +   +      D +   
Sbjct: 56  VAALGRLEPEAEVVSIAAPLALDGDRVAQLLVKEGDRVEAGQIIAILDSRAPLADAVAQA 115

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +K  +  +   ++              A     E     L +  +  +       ++
Sbjct: 116 KEQVKMAQAKLAQVQAG-------------AKTGEIEAQQAELARIKAEQNTEIEAQKAN 162

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK---DLTMMKNLFEKN----AVS 212
           + R    K T + +       +E + +  +     H+    D  +  +L +        +
Sbjct: 163 IARLEAEKSTEIEAQKAIINQMEAQFANAKIEYERHETLFLDGAISASLRDSKKLTFLTA 222

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLEQ 268
           Q  LN+ +  + +     ++ + E +  L+ I     +  L+    L +I+     D++ 
Sbjct: 223 QQQLNEAQATLKRIESSRKQQLIEAQATLKQIETSRPQEILQAKATLNQIAEVRPVDIQV 282

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--IV--PH 324
            Q         L   +   EQ  I +P+ G I   +  +     +    +    IV    
Sbjct: 283 AQTEVESAKVALKQAQTNLEQAYIRAPMPGKI--LKIHT-----RPGAKIGDSGIVDLAQ 335

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQ 382
           +      A++    I  VK G  A +    +    E     I  ++    I S +     
Sbjct: 336 TDQMIAIAEIYQTDINKVKLGQRAIITSQAFPGELEGNVSLIGLQVSRQNIFSNEPGENL 395

Query: 383 TQEYYEVILKITDLAFSD 400
            +   EV +++   A   
Sbjct: 396 DRRVVEVKIRLNPEASKQ 413


>gi|218248489|ref|YP_002373860.1| DevB family ABC exporter membrane fusion protein [Cyanothece sp.
           PCC 8801]
 gi|218168967|gb|ACK67704.1| ABC exporter membrane fusion protein, DevB family [Cyanothece sp.
           PCC 8801]
          Length = 438

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/345 (13%), Positives = 132/345 (38%), Gaps = 18/345 (5%)

Query: 42  ISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLID 97
             VS+ G +     V+ +  P       + +  V+ G+ + +G  +   +++ +    +D
Sbjct: 61  QGVSALGRLEPLGEVINVAPPPNQGGAKVSQLLVQEGTSVKKGQIIAILDNVDQKKAEVD 120

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + + ++   + ++   ++     + +        +  E +L   +     T ++     +
Sbjct: 121 VAQKAVNLAQANLAIIEAGAK--SGEIQAQAAIIKQLEAELSGEIATNQVTIAR-LEMEL 177

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +   +     + R+ +   +    E +  LL        +DL   +   +K   +Q  L 
Sbjct: 178 AGEKQQQTATINRLEAELKDAQREEQRYELLAQDGVISAEDLEKRQLGLDK---AQESLT 234

Query: 218 QQERIVYKSTLELRENIHEQKNM----LRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + +  + K+   L + I E+K      +  +     EA    +   +    D+++ Q   
Sbjct: 235 EAQEKLKKTINILSQQITEEKAKSTTKINSLRRQIQEAKATLSRIAEVRPVDVQKAQAEV 294

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
              +++L   ++  +   + +P  G I+   S+        S  ++++    ++  I A+
Sbjct: 295 DQAVAQLKESQEDLDLAYVKAPGDGQIIKIHSY-PGEKVDDSNGIVELGETQQMMVI-AE 352

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           V    I  VK G  A ++     +   ++ +  +++I   I ++D
Sbjct: 353 VYESDINKVKIGQKANIK--SENNTFSEELQGTVQEIGRQIGKKD 395


>gi|75907353|ref|YP_321649.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75701078|gb|ABA20754.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 481

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/370 (14%), Positives = 121/370 (32%), Gaps = 20/370 (5%)

Query: 15  ASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           +    + L+++  I+G+   W I   I I+V   G ++   NVV ++S  +G I    V+
Sbjct: 31  SPKSWLPLVALGSIVGVAFIWGIYGSIPITVEGRGVLIYPSNVVPLQSKSAGQIMALNVK 90

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH------IDTEKSALDFLNNKYDVL 127
            G  I +G  L T +  E    +  ++  +  L         +   +   +  + +    
Sbjct: 91  VGDVIKKGQVLATIDQAELRKRLQQQRGKLTQLESQDKAVGSLQGRRLEQEERSQQQQRQ 150

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                  E Q +  L K     S                 LT +    +       +   
Sbjct: 151 YLRQRILELQAITPLLKTKGNTSVGQQRQGLQQRLQQAQALTSVFLRRMKIRQELFQKEG 210

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN---IHEQKNMLRHI 244
             +   + + +   ++NL EK A  Q  L + +    +   + REN   + + ++ L+ +
Sbjct: 211 AISGDEALKAEQEYLQNL-EKIADIQAQLKELDVKETQQEKDYRENLTLVADLQSQLKQL 269

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +        +    +   ++++++ +R       +L       +   I+S  +G I+   
Sbjct: 270 DTQQASVAQQDLENVTARNKEIQEVKREIGALELQLG------DNSQIISQHSGRILEIT 323

Query: 305 SFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
             +          L  I   +              + + ++ G +  +        R   
Sbjct: 324 L-TPGQVVNAGTRLATIEAENPQSKLVGVTYFPVAEGKKIQPGMSIQITPQTVKRERFGG 382

Query: 363 FKAIIEKIDP 372
               +  I  
Sbjct: 383 IVGNVTSISR 392


>gi|147678716|ref|YP_001212931.1| membrane-fusion protein [Pelotomaculum thermopropionicum SI]
 gi|146274813|dbj|BAF60562.1| membrane-fusion protein [Pelotomaculum thermopropionicum SI]
          Length = 464

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 109/366 (29%), Gaps = 27/366 (7%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P +   +  +  I +   + W I   I   V   G +     V  I    SG I   +V 
Sbjct: 29  PRAWFALAAIGAIMVTAAL-WGIFGSIPTRVYGQGIVTKSYGVYNIIPAGSGRITDIRVS 87

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G Q+ +G  +   E     + I+  +  ++NLR          +F  N     EK F  
Sbjct: 88  VGDQVKKGDVVARIEQPRLVEQINGLQDQLENLR----------NFDVNGPGPGEKKFLG 137

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            E   L  L            Y  ++   +L  K   +    +            R   +
Sbjct: 138 PELYDLYELAGKIREARAALPYEEANYKNALSGKEHEIEIARIT-------LRQARVNEA 190

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH-----INELY 248
           + Q+ +  +  L++  A+++ DL   ++ +    L+ R    +   +        I    
Sbjct: 191 NKQEYVDKLTWLYQNGAIAEIDLTGAKKDLELLRLQTRAAEEDLAKLTAGEWEETIITYR 250

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE-QKTILSPIAGTIVYNQSFS 307
            +             +          +   K+  L+        ++S + G ++  +   
Sbjct: 251 AKLQQAQLQLQLLEEKFDTTKAVKITETEEKIKKLQDELNLASEVVSQVDGRVLEVRC-G 309

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRA--KVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
             +  Q   PL  +    +         V  ++ + +  G  A +               
Sbjct: 310 KGDLVQPGMPLFSLERQGRTIKTEVVMYVRAEEGKKITPGMEAMISPTTVKKEEYGYMLG 369

Query: 366 IIEKID 371
            +  + 
Sbjct: 370 RVVSVS 375


>gi|312126701|ref|YP_003991575.1| efflux transporter, rnd family, mfp subunit [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776720|gb|ADQ06206.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 663

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 66/401 (16%), Positives = 135/401 (33%), Gaps = 39/401 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I ++VS SG I      V++ S  S  I +    +G  + +G  +   E  +  D ID  
Sbjct: 68  ITVTVSGSGPIE-SAQSVDLTSTVSSTITRVNFNDGDTVKKGDIIFELESQDAKDKIDSI 126

Query: 100 KVSIKNLRCHIDTEKSAL---------------------DFLNNKYDVLEKAFESREEQL 138
           K  I ++   I   + ++                     D ++    VL     S+ +  
Sbjct: 127 KSQIDDVNSSIADVQESIKNLVITAPISGYVKNLNAQEGDRISKGSTVLTIIDTSKLKVT 186

Query: 139 LDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           L F                 I  + +S++  ++ + +      D   K   +   +S+  
Sbjct: 187 LPFSAALFGKVKIGAPAVVYIPDISQSIQGTVSYLGNTTYTN-DYGGKVFDVEITISNPG 245

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LRENI-HEQKNMLRHINELYDEANLE 254
                MK   E    ++  L+ Q+  +     E ++  +  E + +    N+  ++  + 
Sbjct: 246 ALQEGMKASAEIKVGAEVYLSTQDATLEYVDKENVKAKVDGEVEEIFARNNQFVEKGAVL 305

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                 ++S+ L+  Q    +   +L   E   E   I +P  G +     F   +  + 
Sbjct: 306 LKLSNDDLSKQLKNYQTQLKNLQDQLKDAEDNLENYYIKAPFDGVVTNIN-FKKGDNIKA 364

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + L   V  +K    R  +    I  +K G    +      + +       + KI P+ 
Sbjct: 365 GEVLAT-VFDNKNLVFRVDIDELDIAKIKVGQKVNITVDALPETQTNPLTGKVSKI-PLE 422

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               N + T   Y V + I     +  N+++  G  A    
Sbjct: 423 GTTQNGVTT---YSVTISID----NPKNLKI--GMNANAEI 454



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 64/173 (36%), Gaps = 16/173 (9%)

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++    ++  +    D  S +  ++++ +   I +PI+G +    +    +   +   ++
Sbjct: 117 QDAKDKIDSIKSQIDDVNSSIADVQESIKNLVITAPISGYVKNLNA-QEGDRISKGSTVL 175

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I+  +    +    +      VK G  A V  P  +   +         +  + +    
Sbjct: 176 TII-DTSKLKVTLPFSAALFGKVKIGAPAVVYIPDISQSIQG-------TVSYLGNTTYT 227

Query: 380 NLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFTAKNTTLAQEIIH 428
           N    + ++V + I++       +    E++ G  AEV  + ++ T  + +  
Sbjct: 228 NDYGGKVFDVEITISNPGALQEGMKASAEIKVG--AEVYLSTQDAT-LEYVDK 277


>gi|257059831|ref|YP_003137719.1| efflux transporter RND family, MFP subunit [Cyanothece sp. PCC
           8802]
 gi|256589997|gb|ACV00884.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           8802]
          Length = 487

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/342 (12%), Positives = 109/342 (31%), Gaps = 24/342 (7%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           +SG +   ++V  I     G + +  VE G  + +G  L   E+ E        + +   
Sbjct: 62  ASGTVEPIESV-NISPKTPGRLVRLLVEQGMPVKEGQVLAVMENTEIRAQGKQAQANYGQ 120

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
               +++ K  +    N+        +++ E     L +      K      + +  +  
Sbjct: 121 AMATLESAKIRIPNEINQAQTRFMQAQAQLEAAKANLEQAKQRIPKDVEQLQAQLIAAQS 180

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                   +  NR +L+N+ ++      +   +             +Q ++ +  + + +
Sbjct: 181 RAQLASSRVTRNR-ELKNEGAITEDSFDAVLNEAYN----------AQANVREIAQKLEQ 229

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +       I + +  +        +A L           ++ Q +   A   +++  +  
Sbjct: 230 AKNTAPPEIGQLQQAIYQAEAALMDAKLALEERKNTAQTEIAQLEAAAAAAQAEVERIVI 289

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYIRAKVTPK 337
             +   I +P  G +    +     +           S     I+  ++   + AKV   
Sbjct: 290 QFQDTAIRAPFDGIVTQKYAN-VGAFVTPTTSASSTASATSSSILALARGLEVVAKVPEV 348

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I  +++G    +    Y +     F+  + +I P      N
Sbjct: 349 DIGRLQRGQPVRIMADAYPNDT---FEGQVIRIAPEAIVDQN 387


>gi|156346295|ref|XP_001621501.1| hypothetical protein NEMVEDRAFT_v1g221915 [Nematostella vectensis]
 gi|156207503|gb|EDO29401.1| predicted protein [Nematostella vectensis]
          Length = 310

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 88/251 (35%), Gaps = 7/251 (2%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   E Q   F  +Y    S+V    +         +    R I      L ++ S+  
Sbjct: 6   QFGDIENQFALFQKEY---SSEVLQKQLKPYQVESIAQGFEARQISERLSLLASQKSITE 62

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L   + DL+  + L+++  +++ +  +Q+    +S    +  +     +   +NEL  
Sbjct: 63  SELELQKNDLSRYETLYKRGVIAEQEFEKQKLNYLQSQKNYKNLLSSISQLRSSLNELNR 122

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            +     N  K+    +   +            ++       + + I G + + Q ++ +
Sbjct: 123 NSKTTKINATKDA---INLERNVIQSFFQLKKAIKDWELNYVLRTAIRGRVSFMQLWAEN 179

Query: 310 NYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                   +  +VP     YI + K   +    +K G +  +R  ++ D      K  ++
Sbjct: 180 QTVSAGDQVFSVVPIDNEVYIGKVKALAQNSGKLKAGQSVNIRLANFPDTEFGIIKGKVK 239

Query: 369 KIDPIISQQDN 379
            I     ++ N
Sbjct: 240 NISATPDKEGN 250


>gi|168699828|ref|ZP_02732105.1| secretion protein HlyD [Gemmata obscuriglobus UQM 2246]
          Length = 459

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/408 (14%), Positives = 123/408 (30%), Gaps = 54/408 (13%)

Query: 38  LPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
            P   +V  +G  +          + SP  G +KK+ V  G ++  G  L+   D +   
Sbjct: 44  SPWTQTVHGTGRAIAFNPVQRAQFVISPIEGRVKKWHVVEGDRVKAGQLLVELVDNDPLI 103

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           L  L++     L+     +   LD  N         F   E ++L     Y    ++   
Sbjct: 104 LERLREQETLALQRLALADGRVLDQQN------RLEFVKGEREVLVAEAGYRVEQTEAQV 157

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQ 213
             +    +     L R    Y     L +KS++   +     ++    ++L +    + +
Sbjct: 158 LVVKQELQQSAFNLRREELAYERLRKL-SKSAVGEVVSGDAVEEAERKRDLAKAQVPLVE 216

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             L   ER +  +  +          +++        A  E A+  ++ +    Q +R  
Sbjct: 217 ARLKLAERTLDGAKAQREATDKRTAGLIQTEEAAVKAAKSEQASVRQQYNVIRTQVERQT 276

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS--SNYAQQSQPLMKIVPHSKL---- 327
                           + I + + G I    + +       +  + L  +VP  K     
Sbjct: 277 ---------------NQRIHAAVDGVIFRVLANAEAGGQLVRAGERLAVLVPDVKAVTPD 321

Query: 328 --------TYIRAKVTPKQIQHVKKGYT--------ATVRFPHYADIREKKFKAIIEKID 371
                         +    +  V+ G          A V+F  Y +     F+  +  +D
Sbjct: 322 LTGDYHPGIVAELTIDGNDLPLVRVGDRVLLQFEGWAAVQFAAYPEAAAGTFEGRVYLVD 381

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           P              + V+++    A       LR G  A+       
Sbjct: 382 PTADGAGGR------FRVLVEPAAGAAWPEEQFLRQGVRAQGWIVLNE 423


>gi|227533618|ref|ZP_03963667.1| lactococcin A ABC superfamily ATP binding cassette transporter
           permease protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
 gi|227188754|gb|EEI68821.1| lactococcin A ABC superfamily ATP binding cassette transporter
           permease protein [Lactobacillus paracasei subsp.
           paracasei ATCC 25302]
          Length = 465

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 59/431 (13%), Positives = 146/431 (33%), Gaps = 54/431 (12%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           + ++T + + P++ +V+  G      N +               + G  + +G  LL + 
Sbjct: 52  VTVLTAAEIAPVKTAVTVQGT---AANRIVTNHM----------KEGKHVKRGDTLLVYH 98

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D+     + + +  +  L+      K+ L+ LN      +  F S ++       + + +
Sbjct: 99  DVAHPAQLKVLEQQLATLKDQ----KAQLEVLNQSIAANKNLFASPDKFGYQQQVRDYLS 154

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             +V+     +++ +  +   + + I          S      +   Q  +   + L + 
Sbjct: 155 QRRVYELESEALHATQGVADGKSKEIDQLLQTSMQASEAKMTAIREAQTAIRTDRPLSDN 214

Query: 209 NAVS-------------------------QNDLNQQERIVYKSTLELR-ENIHEQKNMLR 242
           +A +                         Q+ L        ++   LR + I++++  L 
Sbjct: 215 HAYNYLYLQYKAEAKNADAANLNNLKGQYQSQLQNLLTTEKETLASLRTQRINQKQADLS 274

Query: 243 HINELYDEANLEFAN--YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                 +EA L        + ++ +  + Q+   +  +KL  L+   +   + +  +G +
Sbjct: 275 AQQTGQNEAKLASLQSHMQQTMTAEQVKVQQGTQEGEAKLAALKDESKNYQVKASASGVL 334

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPH-SKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYAD 357
               S S + Y      L +I+P  +    +  K  V+P +I  +K+G +  +R      
Sbjct: 335 HLEASLSGNKYIPAGTVLAQILPDLATQKEVELKLAVSPAEIMSLKRGQSVRLRIAE--- 391

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                   +  +ID I      N +   Y++V  ++         +    G   +     
Sbjct: 392 -NVPSPMTLTGRIDAIDVAPTVNAKVGNYFKVQARVPLSELQRQTLHY--GIAGQAAVIT 448

Query: 418 KNTTLAQEIIH 428
              T  Q  + 
Sbjct: 449 GTKTYWQYFVD 459


>gi|304317963|ref|YP_003853108.1| efflux transporter RND family, MFP subunit [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779465|gb|ADL70024.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 414

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 125/381 (32%), Gaps = 86/381 (22%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +  ++  +G +       ++ S  +G +     + G ++  G  L+  +      
Sbjct: 42  ASSGKLNSTIVVNGSLTPNKYA-DVSSKLAGQVIAVNADVGDKVKAGQLLVQIDT----- 95

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
                    K L+  +                                        +  +
Sbjct: 96  ---------KELKAQL----------------------------------------QQAD 106

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             I+   +  +     +++   N    E K +  +  L   QK+   +K+L++  A SQ+
Sbjct: 107 ASIAMANKQAEAAKVSIQAAQQNVEAAEIKVNSAKVSLDDAQKNYDRVKSLYDAGAASQS 166

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L+  +  + ++  +    +++ ++    +N    +  +     L++             
Sbjct: 167 QLDAADTQLKQAQNQYNAALNQYESAKTQVNNAQKQYEIYTGPALQQAE----------- 215

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +   +++       I +P+ G +   ++      A    PL+ I   +    I   +
Sbjct: 216 ---AAKNVVQVQMTNSDIYAPLDGIVTN-RNIQPGELATAGTPLLTIA-ETSTLKIEGTI 270

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               +  ++ G    V    + D   K+F+ +I +I P+ +       T + + + + +T
Sbjct: 271 NEDIVPLLRVGQKVPVVIDAFPD---KQFQGVISQIGPVAT------TTGQIFPIEIAVT 321

Query: 395 DLAFSDNNIELRNGFPAEVLF 415
           +        EL+ G  A+ + 
Sbjct: 322 NPG------ELKPGMTAKAML 336


>gi|84060906|ref|YP_444118.1| CvaA [Escherichia coli]
 gi|76781987|gb|AAX22080.2| CvaA [Escherichia coli]
          Length = 303

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 101/299 (33%), Gaps = 24/299 (8%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL----RALLSSHQKDLTMMKNLFEKNAVS 212
           IS +  S K+ L  +    L   D   +SS +       +   + ++   +    K  ++
Sbjct: 5   ISRLEESKKITLDTLEKQRLQYTDAFRRSSDIIQRAEEGIKIMKNNMENYRYYQSKGLIN 64

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           ++ L  Q  + Y+    L     + +     I  L  +   + A++   I +   Q    
Sbjct: 65  KDQLTNQVALYYQQQNNLLSLSGQNEQNALQITTLESQIQTQAADFDNRIYQMELQRL-- 122

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIR 331
              E+ K  +      +  I +   G +      +          L++++P + +  Y+ 
Sbjct: 123 ---ELQKELVNTDVEGEIIIRALSDGKVDSLSV-TVGQMVNTGDSLLQVIPENIENYYLI 178

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI-----------ISQQDNN 380
             V    + ++  G    +R+  +   +  +F A ++ I               + Q+  
Sbjct: 179 LWVPNDAVPYISAGDKVNIRYEAFPSEKFGQFSATVKTISRTPASTQEMLTYKGAPQNTP 238

Query: 381 LQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
             +  +Y+VI           +  + L NG  AE     +   + Q ++ P  D     
Sbjct: 239 GASVPWYKVIATPEKQIIRYDEKYLPLENGMKAESTLFLEKRRIYQWMLSPFYDMKHSA 297


>gi|299131936|ref|ZP_07025131.1| secretion protein HlyD family protein [Afipia sp. 1NLS2]
 gi|298592073|gb|EFI52273.1| secretion protein HlyD family protein [Afipia sp. 1NLS2]
          Length = 412

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 89/278 (32%), Gaps = 32/278 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              I++   +++    + ++        + +    +A     + D      L EK   S+
Sbjct: 149 RAKIATQEATIQRIGRQAKAQESAVEQAQAQLESAQAAAKRAEADFVRQSQLSEKGFASK 208

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
              +Q +    +S   ++            I+                I     + +   
Sbjct: 209 ATFDQSQATRDQSNASVQGAQANLDAAQAQIDV---------------IKAQQTEAEGQL 253

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +  + L   E+     TI +PI G +  N+  +  +     Q L  +VP     +I A 
Sbjct: 254 GELKTALAKAERDLSFTTIRAPIDG-VFSNRLVNEGDNISVGQRLANVVPLDD-VFIDAN 311

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE- 388
               Q+  ++ G    +       ++ +     +E + P           +  T  + + 
Sbjct: 312 FKETQLARIRPGQPVYISVDA---VKGRDIVGTVESLSPASGSVFTLLPPDNATGNFTKI 368

Query: 389 -----VILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                V +++   A +  N+ LR G   EV    + ++
Sbjct: 369 VQRLPVRVRVPK-AVAHENL-LRAGMSVEVEVDTRKSS 404


>gi|146302521|ref|YP_001197112.1| hypothetical protein Fjoh_4794 [Flavobacterium johnsoniae UW101]
 gi|146156939|gb|ABQ07793.1| hypothetical protein Fjoh_4794 [Flavobacterium johnsoniae UW101]
          Length = 430

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 62/409 (15%), Positives = 143/409 (34%), Gaps = 27/409 (6%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +++    P  + R   + I  II ++ + S ++     VS+   I       ++ S  SG
Sbjct: 15  QDVLSKTPIWMIRWGTIVIFSIIVILFYVSYIIRYPDVVSTEIVITTNIPPEKLVSKSSG 74

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
            I+   + + + + + T L   E+     D+  LKK+           E       N + 
Sbjct: 75  RIEAILISDKATVKKNTMLAVIENSANYKDVFLLKKIIADFDINDTKKEFPFAVMKNKQL 134

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             +E AF   ++              +  N  +       K +++    I      L+ +
Sbjct: 135 GEIESAFAIFQK----------DYEVEKLNENLHPFDVENKAQVSEKTQIKERLEILQQQ 184

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH- 243
             +  + L   + ++     LF K  +S  ++  ++    ++    +  +     +    
Sbjct: 185 KEINESELQLQKNEIGRFGILFNKGIISAQEMETKKLSYLQAQKNYKTLLSSISQLKSSL 244

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVY 302
           I+      NL+ ++  +E++ +     R  A    +L  + K  E   T+ S ++G + +
Sbjct: 245 IDNTKMGHNLQISSTKEEVNLN-----RNMAQSFYQLKKVIKEWELTNTLRSSVSGVVTF 299

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
            Q ++ +    +   +  I+P  +  ++ + K TP     +K G    +R  ++ D    
Sbjct: 300 LQVWTENQTINEGDNVFSIIPDKENGFVGKVKATPLNSGKIKVGQNVNIRLANFPDREFG 359

Query: 362 KFKAIIEKIDPIISQQDN-------NLQTQEYYEVILKITDLAFSDNNI 403
             +  I  I  +  +  N           Q  Y   +           I
Sbjct: 360 VLRGKIHNISLVPDKDGNLLLDVSLPDGLQTSYRKRIPFQQEMKGKAEI 408


>gi|226328858|ref|ZP_03804376.1| hypothetical protein PROPEN_02759 [Proteus penneri ATCC 35198]
 gi|225202044|gb|EEG84398.1| hypothetical protein PROPEN_02759 [Proteus penneri ATCC 35198]
          Length = 142

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 4/121 (3%)

Query: 14  PASLKRMTL-LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P     +   + ++G+   I W+   P++  VS+ G +    N   +++   GII    V
Sbjct: 18  PRKFLIIGWSVILLGLAIFIFWAAFAPLDKGVSTKGNVSISGNKKSVQASVEGIITDILV 77

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           +NG  +++G  L+    I++  L+        NL   + T++     LN K + +    E
Sbjct: 78  KNGDSVIEGQTLIQLSPIQSKALVKSLSEQYDNL---LVTQQRLYAQLNEKTEFILDPNE 134

Query: 133 S 133
           +
Sbjct: 135 N 135


>gi|148238891|ref|YP_001224278.1| multidrug resistance efflux pump [Synechococcus sp. WH 7803]
 gi|147847430|emb|CAK22981.1| Possible multidrug resistance efflux pump [Synechococcus sp. WH
           7803]
          Length = 438

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 62/388 (15%), Positives = 132/388 (34%), Gaps = 80/388 (20%)

Query: 15  ASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           +S  R+ + S+ G  + ++ W+ L  I  +V   G ++   N++ + S   G +K   V+
Sbjct: 25  SSSDRLWIASLSGFTLIVLFWAFLGRIPETVPGKGLLIGPGNILRVFSEADGTVKSVNVK 84

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           NG ++  G  L+                 I +L  ++   ++ ++ L+N Y  L K    
Sbjct: 85  NGDRVKPGDTLVKL--------------QIPDLELNVSNSQNLINKLDNTYMTLNKGS-- 128

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
              QLL+   +  S   +V N  IS                                   
Sbjct: 129 --NQLLNIQKEDVSEQIEVINRQISIRQNQAN---------------------------- 158

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           +++K L   +NL E+  +S+ D+   ER          E+I   +     + E   + NL
Sbjct: 159 NYKKFLENSQNLREEGGISEQDVLSAERNYSSQL----ESIESLQIEKLKLLENKKQLNL 214

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +        + D  + +     E+++L  +        I +   GT+         +  Q
Sbjct: 215 QNQEQRLSRNLDFIEKRSQATLELNRLKRVGD------IQATAKGTVFGLSLL-PGDLIQ 267

Query: 314 QSQPLMKIVPHSKL-TYIR-------------AKVTPKQIQH--------VKKGYTATVR 351
            +Q +  +V  ++    +              A      +          +K G   ++ 
Sbjct: 268 TNQLIATLVFDAQKGLMMEDSNSSERQKGLTSAYAPNTAVIFFRNADSHLLKPGDELSLT 327

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDN 379
              ++       +  +  I  + S ++N
Sbjct: 328 PEGFSQEEFGGIRGELVSISTLPSSREN 355


>gi|307153526|ref|YP_003888910.1| DevB family ABC exporter membrane fusion protein [Cyanothece sp.
           PCC 7822]
 gi|306983754|gb|ADN15635.1| ABC exporter membrane fusion protein, DevB family [Cyanothece sp.
           PCC 7822]
          Length = 591

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/338 (13%), Positives = 120/338 (35%), Gaps = 22/338 (6%)

Query: 42  ISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFED-IETTDLID 97
            +V++ G +  +  V+++ +P       + K  V+ G  +  G  +   ++    +  + 
Sbjct: 214 KAVAALGYLEPKGEVIQVSAPAMMDGLRVDKLLVKEGDSLKAGQKIAILDNYDRLSAALR 273

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                +K  +  +    +     + +    +  FE  + +L   +    +T + +     
Sbjct: 274 QANSQVKIAQARLAQVLAGAK--SGEITAQKSKFEGSQAELEGQINTQKATIADLE---- 327

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           + +      ++  ++ +     +  +       L  S         ++  K   +   +N
Sbjct: 328 AQLQGEKSAQIATIQGLKAQLDNATSDCQRYEFLYQSGGVSQQSRDSVCLKQKTTLEQVN 387

Query: 218 QQERIVYKSTLELRENIHEQ-KNMLRHINELYDEANLEFANYLKEIS---RDLEQNQRTF 273
           + +  + +     +E I +   N+ R I  +  + N + A           D+E  +   
Sbjct: 388 EAQANLKRIITSRQEQIQQAHANLQRTIETVKSQINADKATLQATAQVRPEDIEVAKAEL 447

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS-SSNYAQQSQPLMKIVPHSKLTYIRA 332
               + +   +   +   + SP  G I   +  + +     + Q ++++   +   Y+ A
Sbjct: 448 ESAKTAVDKAKADLKLAYVTSPKDGQI--LKIHTWAGEMVSRDQGIVELG-QTSQMYVTA 504

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +V    I  VK G  A +     A+   K+ K  ++KI
Sbjct: 505 EVYETDITRVKVGQPAIIT----ANGVTKQLKGTVDKI 538


>gi|119486331|ref|ZP_01620390.1| hypothetical protein L8106_16794 [Lyngbya sp. PCC 8106]
 gi|119456544|gb|EAW37674.1| hypothetical protein L8106_16794 [Lyngbya sp. PCC 8106]
          Length = 618

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 64/419 (15%), Positives = 133/419 (31%), Gaps = 61/419 (14%)

Query: 42  ISVSSSGEILN-EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED----------- 89
           I + ++G+I       VE+ SP +G + +  VE G  + QG  L                
Sbjct: 76  IGIKTTGQIETLPRKTVEVTSPLAGKVIELLVEPGDTVNQGEILAVLSSPELVSLRVEAL 135

Query: 90  ----------IETTDLIDLKKVSIKNLR----------------CHIDTEKSALDFLNNK 123
                      +    ++L + + +  +                  +  E+         
Sbjct: 136 QNQGEAQAHLKQAQANLELAQQNYQRQQNIAEAEIEQANNQLKAAQLRYERDQAIVERGA 195

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              + +    R+ ++     +   T  +V                   R    ++  L N
Sbjct: 196 VVGVAQENYQRQIEIAKAEIEQAETALEVALENYQRDEELTNAGALPRRDFLESKERLAN 255

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + L    S  +        L  +  V Q +++   R + +S   L E   +Q    + 
Sbjct: 256 AKTDLARAQSRREV-------LSAETEVKQAEIDLPVRDLRESEGLLAEAKSQQIRANQK 308

Query: 244 INELYDEANLEFANYLKEISR-DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              L  EA L+      E ++ +L  +Q T+   + +L        +  I +PI+G +  
Sbjct: 309 REVLEAEAELKRTEAELEAAKSNLNLSQTTYEIRLQQLGTNGNNEGKVIITAPISGVVSD 368

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +     +      PLM I   +   +  A +  K +  V+ G    ++     +     
Sbjct: 369 REITLGQSVDDAGLPLMTIQ-DNSQVWATANLYEKDVAQVRLGQNVRLKVNSLPNQ---V 424

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           F+  I +I PI+  +             +        + +  L+ G  AE+    + TT
Sbjct: 425 FEGRIAQISPIVEGET-----------RVIPVRAELENEDNLLKPGMFAELELITEKTT 472


>gi|262379213|ref|ZP_06072369.1| multidrug resistance secretion protein [Acinetobacter
           radioresistens SH164]
 gi|262298670|gb|EEY86583.1| multidrug resistance secretion protein [Acinetobacter
           radioresistens SH164]
          Length = 382

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 55/408 (13%), Positives = 125/408 (30%), Gaps = 64/408 (15%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           LK + +L I+ ++    W           S+       +  +I S  SG + +  V++  
Sbjct: 30  LKIVAILFIVAVLIYALWMYFA---SRSVSTDNAYVGADTAQITSMVSGQVTEVLVKDTQ 86

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           Q+ QG  L+  +                                             R+ 
Sbjct: 87  QVKQGDVLVRIDP--------------------------------------------RDA 102

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           ++     +     +K      S+  +SL  +++            + +     A L+  Q
Sbjct: 103 KIALAQAQAELAKAKRQYNQTSANSQSLNSQVSVR---ADEIASAQAQVKKAEADLAKAQ 159

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            D    + L E  A+S+ +++  + ++  +   L   + +        N    ++ L   
Sbjct: 160 ADYERRRKLSETGAISKEEMSSAQTVLDTARASL--TLAQAGLSQAEANRKAAQSTLAAN 217

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             L   + +        A   +++       E+  + +P+ G +V  ++           
Sbjct: 218 EALIRGATERSTPDVLIAQ--ARVEQAMLDLERTEVRAPLDG-VVSRRNVQVGQRVAPGN 274

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD-----IREKKFKAIIEKID 371
            LM +VP     Y+ A     Q+  V+ G    +    Y D      +   F        
Sbjct: 275 SLMVVVPV-AQLYVDANFKESQLAKVRTGQAVELISDFYGDEVVYHGKVLGFSGGTGAAF 333

Query: 372 PIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +I  Q+      +  +   V + +     + + + +     A V  T
Sbjct: 334 ALIPAQNATGNWIKVVQRLPVRIALDPKELAQHPLRVGLSMNATVDLT 381


>gi|332982241|ref|YP_004463682.1| RND family efflux transporter MFP subunit [Mahella australiensis
           50-1 BON]
 gi|332699919|gb|AEE96860.1| efflux transporter, RND family, MFP subunit [Mahella australiensis
           50-1 BON]
          Length = 440

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 109/357 (30%), Gaps = 66/357 (18%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    VE G  + +G  LL  +  +    ID  + +    + +++  K   + L+N  
Sbjct: 78  GKVTAIPVEIGDAVKKGDLLLELDTSDIQPQIDQAQAAYNVAKINVNDTKKKKEDLDNME 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                              +        ++ + +      L+++
Sbjct: 138 ---------------------------------KKLKDQQNSLTSQQKQLNDTVKQLQSQ 164

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            + L+  L+S   +    +         Q+ ++  E  + K+   L       K +   I
Sbjct: 165 LNDLKKQLASAPDERVKAQL--------QSTIDALESQLSKAQDGLSSVNEALKAVQTQI 216

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           + +        ++ L  ++  L+Q +       + L + +       I +PI G +    
Sbjct: 217 SSIATSKMQIPSDEL--LNAQLKQAE-------AALNLAKHQLTNTKIYAPIDGIVASVN 267

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                  AQ + P+  I        +  +V    I  ++KG +  ++     D       
Sbjct: 268 VDEGEMVAQTTLPMNVI--DVSKLLMDIQVAEADISKIQKGQSVNIKVDAVPDQTY---N 322

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             +  I P    +  N      Y V ++I      +    L+ G  A         T
Sbjct: 323 GTVTMISPTPDPRSQN------YPVSIQID-----NKGNYLKAGMFARAELAVDKKT 368


>gi|307689421|ref|ZP_07631867.1| biotin/lipoyl attachment domain-containing protein [Clostridium
           cellulovorans 743B]
          Length = 370

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 89/266 (33%), Gaps = 17/266 (6%)

Query: 177 NRLDLENKSSLLRA---LLSSHQKDLTMMKNLFEKNAVSQ----NDLNQQERIVYKSTLE 229
               +EN+   L     LL   + +     N F+KN + +    N L      + +  ++
Sbjct: 101 QIEQVENQVEFLNKRIDLLKRAENEANKGTNTFDKNNIDELEFYNRLLGSNAKLEEYKVD 160

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL----TILEK 285
             E + +Q      I + YD+A ++      +        +     E  KL      +  
Sbjct: 161 -EEALRKQGYKEAEIKQFYDKAQIKKNQIYYDTILSFTNERNQLEMEKDKLETQKKAIAN 219

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           +  +  I +   G I  N         Q    +  I        + A ++      V++ 
Sbjct: 220 SMNEYIIYAVSDGKIHLNSEIKKGMVLQSGSQIGSIAKVDGELTVEALISGSDRPRVQEN 279

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--- 402
              ++          +     IE ID   +   +N + + Y++V ++  +    D N   
Sbjct: 280 DEVSLAIDGLNQAEYRTLNGNIESIDEDAT--IDNQKGKIYFKVKIRPDNNYIEDKNGDK 337

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIH 428
           ++L+ G   EV    +  T  +  + 
Sbjct: 338 VKLKLGMVTEVRVKYEKITYMKYFME 363



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 108/293 (36%), Gaps = 16/293 (5%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +  P  +  + L+ ++ ++    WS        V+ +G +  E N   I +  SG +K+ 
Sbjct: 18  KKPPRFMYYIILVMLMLVVSFFIWSTKSIKTYIVTGNGIVTTE-NKSNITAKVSGEVKEV 76

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            ++ G ++  G  L+ F   E    I+  +  ++ L   ID  K A +  N   +     
Sbjct: 77  YIQEGKEVKAGDILIVFNSPEPKYQIEQVENQVEFLNKRIDLLKRAENEANKGTNT---- 132

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSV-YRSLKMKLTRMRSIYLNRLDLENKS---S 186
           F+      L+F  +   + +K+  Y +     R    K   ++  Y      +N+    +
Sbjct: 133 FDKNNIDELEFYNRLLGSNAKLEEYKVDEEALRKQGYKEAEIKQFYDKAQIKKNQIYYDT 192

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH-----EQKNML 241
           +L      +Q ++   K   +K A++ +        V    + L   I      +  + +
Sbjct: 193 ILSFTNERNQLEMEKDKLETQKKAIANSMNEYIIYAVSDGKIHLNSEIKKGMVLQSGSQI 252

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             I ++  E  +E      +  R  E ++ + A  +  L   E       I S
Sbjct: 253 GSIAKVDGELTVEALISGSDRPRVQENDEVSLA--IDGLNQAEYRTLNGNIES 303


>gi|302874312|ref|YP_003842945.1| biotin/lipoyl attachment domain-containing protein [Clostridium
           cellulovorans 743B]
 gi|302577169|gb|ADL51181.1| biotin/lipoyl attachment domain-containing protein [Clostridium
           cellulovorans 743B]
          Length = 371

 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 89/266 (33%), Gaps = 17/266 (6%)

Query: 177 NRLDLENKSSLLRA---LLSSHQKDLTMMKNLFEKNAVSQ----NDLNQQERIVYKSTLE 229
               +EN+   L     LL   + +     N F+KN + +    N L      + +  ++
Sbjct: 102 QIEQVENQVEFLNKRIDLLKRAENEANKGTNTFDKNNIDELEFYNRLLGSNAKLEEYKVD 161

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL----TILEK 285
             E + +Q      I + YD+A ++      +        +     E  KL      +  
Sbjct: 162 -EEALRKQGYKEAEIKQFYDKAQIKKNQIYYDTILSFTNERNQLEMEKDKLETQKKAIAN 220

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           +  +  I +   G I  N         Q    +  I        + A ++      V++ 
Sbjct: 221 SMNEYIIYAVSDGKIHLNSEIKKGMVLQSGSQIGSIAKVDGELTVEALISGSDRPRVQEN 280

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN--- 402
              ++          +     IE ID   +   +N + + Y++V ++  +    D N   
Sbjct: 281 DEVSLAIDGLNQAEYRTLNGNIESIDEDAT--IDNQKGKIYFKVKIRPDNNYIEDKNGDK 338

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIH 428
           ++L+ G   EV    +  T  +  + 
Sbjct: 339 VKLKLGMVTEVRVKYEKITYMKYFME 364



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 108/293 (36%), Gaps = 16/293 (5%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +  P  +  + L+ ++ ++    WS        V+ +G +  E N   I +  SG +K+ 
Sbjct: 19  KKPPRFMYYIILVMLMLVVSFFIWSTKSIKTYIVTGNGIVTTE-NKSNITAKVSGEVKEV 77

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            ++ G ++  G  L+ F   E    I+  +  ++ L   ID  K A +  N   +     
Sbjct: 78  YIQEGKEVKAGDILIVFNSPEPKYQIEQVENQVEFLNKRIDLLKRAENEANKGTNT---- 133

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSV-YRSLKMKLTRMRSIYLNRLDLENKS---S 186
           F+      L+F  +   + +K+  Y +     R    K   ++  Y      +N+    +
Sbjct: 134 FDKNNIDELEFYNRLLGSNAKLEEYKVDEEALRKQGYKEAEIKQFYDKAQIKKNQIYYDT 193

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH-----EQKNML 241
           +L      +Q ++   K   +K A++ +        V    + L   I      +  + +
Sbjct: 194 ILSFTNERNQLEMEKDKLETQKKAIANSMNEYIIYAVSDGKIHLNSEIKKGMVLQSGSQI 253

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             I ++  E  +E      +  R  E ++ + A  +  L   E       I S
Sbjct: 254 GSIAKVDGELTVEALISGSDRPRVQENDEVSLA--IDGLNQAEYRTLNGNIES 304


>gi|240080019|ref|ZP_04724562.1| putative secretion protein [Neisseria gonorrhoeae FA19]
 gi|240122810|ref|ZP_04735766.1| putative secretion protein [Neisseria gonorrhoeae PID332]
 gi|260441213|ref|ZP_05795029.1| putative secretion protein [Neisseria gonorrhoeae DGI2]
          Length = 311

 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 100/315 (31%), Gaps = 20/315 (6%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSV-YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +Q L        T ++     +  +     +     +  +   +L +  +    +  +  
Sbjct: 2   QQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLHILQQIDGQKRRIRL 61

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++ L   + L   +AVS+ +    E  + +   +L     E+  +L+ I       NL 
Sbjct: 62  AEEMLRKYRFLSANDAVSKQETMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ----NLT 117

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +         
Sbjct: 118 LASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQVDP 175

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           S+ L+ IVP     Y    +       +K      +R+  Y   +       +  +    
Sbjct: 176 SKLLLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVAKTA 235

Query: 375 SQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
             +                 +  Y V +K      +       L+ G   E     +   
Sbjct: 236 LGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHEKRR 295

Query: 422 LAQEIIHPITDNWPK 436
           L + ++ PI     +
Sbjct: 296 LYEWVLEPIYSMSGR 310


>gi|119511710|ref|ZP_01630814.1| Secretion protein HlyD [Nodularia spumigena CCY9414]
 gi|119463619|gb|EAW44552.1| Secretion protein HlyD [Nodularia spumigena CCY9414]
          Length = 401

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 107/338 (31%), Gaps = 47/338 (13%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIK---SPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + LLP   +V++ G I  +  V+++    S     +++  V  G +I  G  +   +   
Sbjct: 53  AALLPELKTVTALGRIEPQGKVIKLSATTSTEGSRVEELLVREGDRIKAGQVIAILDS-- 110

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                                            D L  A +  EEQ+       +   + 
Sbjct: 111 --------------------------------RDRLLAALKEAEEQVKVEQANLNRIQAG 138

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                I +   ++       +     +   +   + L+A +     +    + L+E+ A+
Sbjct: 139 AKRGEILAQSATIARLEAERQGDIAAQ---KTTLARLQAEVRHAAAEEQRYQALYEEGAI 195

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S +  + +   +  +   L+E   + K       +   EA        +    D+     
Sbjct: 196 SASQRDSKRLTLETAQKNLQEAQTQLKRTESTSQQQIKEAIATLDQISEVPQVDIAAAIA 255

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                ++ +   +   EQ  + SP  G I      +       ++ + +I   +   Y+ 
Sbjct: 256 EVNRAIAAMKRTQANLEQAYVRSPQDGQIFE--IHTRPGELISNEGIAEIG-QTSQMYVI 312

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           A+V    I  V  G    +    + D    + +  +++
Sbjct: 313 AEVYESDIGKVHPGQKVQI----FGDFLAIELQGTVDR 346


>gi|261366204|ref|ZP_05979087.1| putative secretion protein HlyD [Subdoligranulum variabile DSM
           15176]
 gi|282571796|gb|EFB77331.1| putative secretion protein HlyD [Subdoligranulum variabile DSM
           15176]
          Length = 536

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 66/394 (16%), Positives = 131/394 (33%), Gaps = 49/394 (12%)

Query: 43  SVSSSGE---ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
              +SG    +   D+V   K      +    V  G  +  G  + T +  +    I+  
Sbjct: 81  GTVASGSTASVTASDSVKTYK------VTAVNVAVGDTVKTGDVIATLDTSDVEKQIETA 134

Query: 100 KVSIKNLRCHIDT--EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + +  +     +T   +S  D   N   + EK  +++++     L  Y+S+       G 
Sbjct: 135 QQNYNDSLDQAETTYTQSVEDQATNLAQLQEKLDQAQQDYDTLGLTDYYSSMQNA--NGA 192

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS--QND 215
               R L      +         L+N  S L+  L+  Q D +  +    +N +S  QN 
Sbjct: 193 KGTNRELVEYYYGL--YSEKIAQLQNTISNLQIQLTQAQSDGSTDRQQEIQNQLSDYQNQ 250

Query: 216 LNQQERIVYKSTLELRE--NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           L+  +       L L+    I +  N +  + +  D+A   + N +   SR+++  +   
Sbjct: 251 LSIAKGECSIPELGLQGFDTIAQYYNQIEQLRDALDQAQQNYDNAVTTNSRNVDSAETKL 310

Query: 274 AD---EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY----AQQSQPLMKIVPHSK 326
                    LT L+ T E  T+ + + GTI    + +  +         Q +        
Sbjct: 311 EQASRTSDTLTTLQSTLEDCTLTATMDGTITELNA-TVGSVCTGTVATIQDV-------S 362

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              +   +    +  +  G    +      D         + +IDP+ + + +   T   
Sbjct: 363 DLTVEVTIPASSVGKLSTGMQCNITSDATGDA---VIPGTLTRIDPVANSEGSFGAT--- 416

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             V +  TD         L  G  A+V       
Sbjct: 417 --VTVSGTDSG-------LLIGISAQVEIVISEK 441


>gi|170741915|ref|YP_001770570.1| HlyD family secretion protein [Methylobacterium sp. 4-46]
 gi|168196189|gb|ACA18136.1| HlyD family secretion protein [Methylobacterium sp. 4-46]
          Length = 435

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 54/440 (12%), Positives = 127/440 (28%), Gaps = 60/440 (13%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +L++N       + + + +       W        + S  G +      V + +P +G++
Sbjct: 35  DLRQNRTTLFATLLVGATVCATLGGLW--FGRFAQTESVRGVVAATGGFVRLDAPRAGVV 92

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V  G ++  G+P+        T     + V+   +R  + T ++           +
Sbjct: 93  SRLAVTQGDRVAAGSPVYALRLGAATA--GGESVAEAEIRNLLQTRRTQEAEAAAAEAFI 150

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +A   ++    D            F  G+ +  R +     + R+I             
Sbjct: 151 AQATRQQKAIESDQSR---------FYAGLDAQSRQVAAAADKSRAIVRRVSAY------ 195

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                              ++   +++ L  +ER  Y    +    + E +         
Sbjct: 196 ------------------VKEGYATRDVLEARERTTY----DYERQLAEIELRRLEYQRQ 233

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E    +   +          +       S++  L +T     I +P AGT++   +  
Sbjct: 234 DTERRRAYETLVATKQSQKAAARSQIESIDSRIAAL-RTESALEIQAPSAGTVLALGA-K 291

Query: 308 SSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
             +  +  Q +  I  P +    +  +   + +   K G    +++  +           
Sbjct: 292 VGDSVRSGQLVAAIGDPAAAPLIV-VEAPSRAVGLAKVGQRVILKYDAFPYKTFGIHHGT 350

Query: 367 IEKID-------------PIISQQDNNLQTQEYYEVILKIT--DLAFSDNNIELRNGFPA 411
           I  I              P        +  Q  Y + ++    D+      + L+ G   
Sbjct: 351 ITYISEAAVRAPVTEGLPPEAGLDPRPVPMQSAYRIEIRPDRADVDAYGEKVPLKIGATL 410

Query: 412 EVLFTAKNTTLAQEIIHPIT 431
            V    +   L      PI 
Sbjct: 411 SVDIVVERRRLIDWATDPIR 430


>gi|306824605|ref|ZP_07457950.1| BlpC ABC superfamily ATP binding cassette transporter
           [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304433173|gb|EFM36144.1| BlpC ABC superfamily ATP binding cassette transporter
           [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 453

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 65/439 (14%), Positives = 147/439 (33%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEITPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +          +  ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALETQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNR 178
              E        +  +Q  D       T ++V N     +S   +++ ++T+++      
Sbjct: 132 GEDEFGYHNTFMNFTKQSHDIELGITKTNTEVSNQANLANSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALL-SSHQKDLTMMKNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +S+     + + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIINKRARLPTSNPHQSILNRYLVASQGQTQGTAEEPFLSQINQSIANLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLETKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P  G I  N  F   N       + +I P    ++   I   V+   +  + KG 
Sbjct: 312 NTLTAPSKGIIHLNSEFEGKNRIPTGTEIAQIFPIITDTREVLITYYVSSDHLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGN-HGITIIGQLQSIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|186684271|ref|YP_001867467.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186466723|gb|ACC82524.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 399

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/331 (12%), Positives = 105/331 (31%), Gaps = 47/331 (14%)

Query: 42  ISVSSSGEILNEDNVVEIK---SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +V++ G I  +  V+++    S     ++K  V+ G  +  G  +              
Sbjct: 61  KTVTALGRIEPQGKVIKLSAAVSAEGSRVEKLLVKEGDWVKAGQLIAIL----------- 109

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                                  N  D L+   +  +EQ+       + T +      I+
Sbjct: 110 -----------------------NSRDRLQAELKEAQEQVKVAQANLNRTQAGAKRGEIA 146

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +   ++       +     +          +A + + Q +    + L+++ A+S +  + 
Sbjct: 147 AQKAAIARLEAERQGDINTQ---AATIERFQAEVQNAQAEDERYQQLYQQGAISASQRDS 203

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           +   +  +   L+E   +         +   +A        +    D+E  Q      ++
Sbjct: 204 KRLNLETAQKSLQEAQAQLNRTQSASQQQVKQATATLEEIAEVRGVDVEAAQAEINRAVA 263

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            + + +   +Q  + SP  G +    +         +  +  I   +   Y+ A+V    
Sbjct: 264 AMNLGKINLKQAEVRSPQNGQVFEIHTH-PGELVSNNG-IADIG-QTSQMYVIAEVYESD 320

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           I  V  G    +    + D    + + I+++
Sbjct: 321 IGKVHSGQQVRI----FGDYLPIELQGIVDR 347


>gi|218246789|ref|YP_002372160.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 8801]
 gi|218167267|gb|ACK66004.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           8801]
          Length = 487

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/342 (12%), Positives = 110/342 (32%), Gaps = 24/342 (7%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           +SG +   ++V  I     G + +  VE G  + +G  L   E+ E        + +   
Sbjct: 62  ASGTVEPIESV-NISPKTPGRLVRLLVEQGMPVKEGQVLAVMENTEIRAQGKQAQANYGQ 120

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
               +++ K  +    N+        +++ E     L +      K      + +  +  
Sbjct: 121 AMATLESAKIRIPNEINQAQTRFMQAQAQLEAAKANLEQAKQRIPKDVEQLQAQLIAAQS 180

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                   +  NR +L+N+ ++      +   +             +Q ++ +  + + +
Sbjct: 181 RAQLASSRVTRNR-ELKNEGAITEDSFDAVLNEAYN----------AQANVREIAQKLEQ 229

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +       I + + ++        +A L           ++ Q +   A   +++  +  
Sbjct: 230 AKNTAPPEIGQLQQVIYQAEAALMDAKLALEERKNTAQTEIAQLEAAAAAAQAEVERIVI 289

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYIRAKVTPK 337
             +   I +P  G +    +     +           S     I+  ++   + AKV   
Sbjct: 290 QFQDTAIRAPFDGIVTQKYAN-VGAFVTPTTSASSTASATSSSILALARGLEVVAKVPEV 348

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I  +++G    +    Y +     F+  + +I P      N
Sbjct: 349 DIGRLQRGQPVRIMADAYPNDT---FEGQVIRIAPEAIVDQN 387


>gi|322433192|ref|YP_004210413.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX9]
 gi|321165584|gb|ADW71286.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX9]
          Length = 527

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 49/353 (13%), Positives = 114/353 (32%), Gaps = 25/353 (7%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGI+ K  VEN  ++ +G  L+  +D +     +    +    +  +  +   +      
Sbjct: 189 SGIVSKVYVENTFRVKKGQLLVELDDRDNQVAREQAAANYAQSQAAVRAQSPNV------ 242

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                    + ++        Y+   ++         YRS    L +  +   N +  E 
Sbjct: 243 ------GITATDQNTQVISRDYNVINNEAQVAQAEERYRSALADLRQAEAQEGNAIREEE 296

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +  +L            + +  +++ A  +    +       S     +++ + +  L  
Sbjct: 297 RYGMLVV-------KEEVTREQYDQRATERRTQAEVVASRRNSAEAAHKSVTQAEAQLEI 349

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             +   +A  +    ++     L Q + +     ++    +   E   I +P  G I   
Sbjct: 350 AKQQARQARQDTPRQIQMQREMLAQRKASELAAKAQSDQSQLNLEYTRIYAPEDGIIGDK 409

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           Q   ++  A   Q L  +   +   +I A     +I+ +  G   T+     +   +   
Sbjct: 410 QVQVATQVA-PGQELFALTQTND-IWITANFKETEIRRMHPGQGVTIYVDALSQKFQGYV 467

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAE 412
           +A+      + S       T  Y +V+    ++I   A  D    L  G   E
Sbjct: 468 EALPGGTGAVYSLLPPENATGNYVKVVQRLPVRIRINAGQDGAQRLAPGMSVE 520


>gi|257061552|ref|YP_003139440.1| ABC transporter transmembrane protein [Cyanothece sp. PCC 8802]
 gi|256591718|gb|ACV02605.1| ABC exporter membrane fusion protein, DevB family [Cyanothece sp.
           PCC 8802]
          Length = 438

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/345 (13%), Positives = 131/345 (37%), Gaps = 18/345 (5%)

Query: 42  ISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLID 97
             VS+ G +     V+ +  P       + +  V+ G+ + +G  +   +++ +    +D
Sbjct: 61  QGVSALGRLEPLGEVINVAPPPNQGGAKVSQLLVQEGASVKKGQIIAILDNVDQKKAEVD 120

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + + ++   + ++   ++     + +        +  E +L   +     T ++     +
Sbjct: 121 VAQKAVNLAQANLAIIEAGAK--SGEIQAQAAIIKQLEAELSGEIATNQVTIAR-LEMEL 177

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +   +     + R+ +   +    E +  LL        +DL   +   +K   +Q  L 
Sbjct: 178 AGEKQQQTATINRLEAELKDAQREEQRYELLAQDGVISAEDLEKRQLGLDK---AQESLT 234

Query: 218 QQERIVYKSTLELRENIHEQKNM----LRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + +  + K+   L + I E+K      +  +     EA    +   +    D+++ Q   
Sbjct: 235 EAQEKLKKTINILSQQITEEKAKSTTKINSLRRQIQEAKATLSRIAEVRPVDVQKAQAEV 294

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
              M++L   ++  +   + +P  G I+   S+        S  ++++    ++  I  +
Sbjct: 295 DQAMAQLKESQEDLDLAYVKAPGDGQIIKIHSY-PGEKVDDSNGIVELGETQQMMVI-TE 352

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           V    I  VK G  A ++     +   ++ +  +++I   I ++D
Sbjct: 353 VYESDINKVKIGQKANIK--SENNTFSEELQGTVQEIGRQIGKKD 395


>gi|149199948|ref|ZP_01876975.1| Secretion protein HlyD [Lentisphaera araneosa HTCC2155]
 gi|149136923|gb|EDM25349.1| Secretion protein HlyD [Lentisphaera araneosa HTCC2155]
          Length = 474

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 67/384 (17%), Positives = 134/384 (34%), Gaps = 67/384 (17%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  + + ++    D I   + ++ N + +I+ +K  +D                   
Sbjct: 73  VKKGELVASIDNKTMLDEIRGLENNLNNYQRYINLQKLTMDL-----------------N 115

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L  +     +  SK+        Y   K     ++++ +NR   E K       L+  ++
Sbjct: 116 LKSYDASVRTYRSKLKRSREIYSYEKNKPHPHEVKTMKINRKLAELK-------LAEDER 168

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE----------- 246
            L + K L+EKN +S    ++  + V  S   LR+ I E  ++++ ++E           
Sbjct: 169 VLKIEKKLYEKNFISAMAYDKFVKNVKLSKENLRQVITENTSLMKGVDEDKLKVLDQNIE 228

Query: 247 ---LYDEANLEFANYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG--TI 300
              +  E  +E     +E ++  L++ Q      ++ L   +K  +Q  IL+P  G   I
Sbjct: 229 NAKVALEKQVEMRKRQEESLNNKLKETQAKIDTILTDLNYKKKISKQTQILAPEDGYLRI 288

Query: 301 VYNQSFSSSNYAQQ-------SQPLM---KIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
              + +SS              Q ++    I P      +   V       +K G    +
Sbjct: 289 KKKRDWSSGGVYLPYRAGNSVGQNVIIADVINPT--KMEVSCTVNESDYDKIKPGMPVNL 346

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDN----NLQTQEYYEVILKITDLAFSDNNIELR 406
            F  Y +      K  +  I  +   ++N           Y   +KI     + N ++L 
Sbjct: 347 EFIAYPEQT---MKGKVIDIAGLGQDRNNWVDSPDGKSRVYLFEIKI---ELASNKLKLH 400

Query: 407 NGFPAEV-LFTAKNTTLAQEIIHP 429
            G    V    A      Q +  P
Sbjct: 401 PGMSVSVNFKLANKR---QYLTIP 421


>gi|167769520|ref|ZP_02441573.1| hypothetical protein ANACOL_00854 [Anaerotruncus colihominis DSM
           17241]
 gi|167668488|gb|EDS12618.1| hypothetical protein ANACOL_00854 [Anaerotruncus colihominis DSM
           17241]
          Length = 614

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 128/396 (32%), Gaps = 26/396 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  ++S +G + + +  +   +  S ++ +  V+ G ++  G  L   +  + +  I  +
Sbjct: 78  LVSTISVTGTVESANEGLVYSNLNS-LVTEVGVKVGDRVAAGDTLAQLDTSDLSLSIAEQ 136

Query: 100 KVSIKNL--RCHIDTEKSALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKVFN 154
           +  I       +   E+S     N K D+   ++    S E  L     + +S    + +
Sbjct: 137 QAQINKQVKLNNHALEQSQKALDNAKSDIANDVDADLISAENALKLAQQELNSARRDLQD 196

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
           +     Y    M               + +  L  A     +    + + + E+   ++ 
Sbjct: 197 HEDDLEYADSVMNDLEKELNRARNEMNDAERELELAEREERENGTPVPQEVRERYEQAKE 256

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL-------- 266
             +   +   ++      +I       R     Y+ A           SR+L        
Sbjct: 257 KYDAVNKEWVEADRSYGSDISSYSRAYRQARVSYENALANKKAAENRASRNLDTLQDEIT 316

Query: 267 -EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
            +Q Q         L   +K     T+ +PI+GT+    +         +  LM +V  +
Sbjct: 317 GQQIQNDVTSMQISLQKYQKDFADSTLKAPISGTVTAVYA-KEGA---PAGGLMFVVEDT 372

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               I+ K+    I  V+ G    ++        E++F   I  I P   +         
Sbjct: 373 DSLVIKTKLKEYDIASVEVGMPVVIKSDA---TGEQEFMGHISHISPAAVKSSTGEIQT- 428

Query: 386 YYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAKNT 420
             E  ++   ++   + +  LR G    +    +  
Sbjct: 429 --EGSVEFDAEITLDEQDTGLRVGMNTRMTIETERK 462


>gi|282895494|ref|ZP_06303631.1| ABC-transporter DevB family protein [Raphidiopsis brookii D9]
 gi|281199527|gb|EFA74390.1| ABC-transporter DevB family protein [Raphidiopsis brookii D9]
          Length = 399

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 53/345 (15%), Positives = 123/345 (35%), Gaps = 48/345 (13%)

Query: 38  LPIEISVSSSGEILNEDNVVEIK---SPFSGI-IKKFQVENGSQILQGTPLLTFEDIETT 93
            PI   V++ G +  +  ++ +    S   GI I K  V+ G +I QG  +   ++    
Sbjct: 55  SPIITGVAALGRLEPQGEIIRLSASNSLGGGIRIAKLLVKKGDKIRQGQLIAFLDN---- 110

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                                         Y +   A E  + Q+           +   
Sbjct: 111 ------------------------------YSLNLAALEKAKRQVEVAKANLEKVEAGAK 140

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              I +   ++      +R     +  +    + L+A L++ Q++    ++L+E  AVS 
Sbjct: 141 QGDIYAQKATIGRLEAELRGETSAQKAI---IARLQAELNNAQRENQRYEDLYENGAVSA 197

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           ++   +         ++ E         + + +  +EA     + ++    DL+  +   
Sbjct: 198 SNAESKRLRRDTLQQQINEAKAALNRTQQTLQKQLNEAQSRLNSIVEIRPTDLQVAKADL 257

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A   + +T ++   +   I SPI G +   +  +       SQ + ++   ++  Y+ A+
Sbjct: 258 ASAKASITQVQAELDLSIIRSPIDGQV--LKINAWPGEIISSQGIAELG-RTQQMYVVAE 314

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           V    ++ VK G +  +    +      K +  +  I   ++QQ+
Sbjct: 315 VYETDVKKVKLGQSVDITADAFP----GKIQGTVTDIGLQVNQQN 355


>gi|17231202|ref|NP_487750.1| heterocyst specific ABC-transporter, membrane fusion protein
           [Nostoc sp. PCC 7120]
 gi|1490222|emb|CAA67985.1| devB [Nostoc sp. PCC 7120]
 gi|17132844|dbj|BAB75409.1| heterocyst specific ABC-transporter, membrane fusion protein
           [Nostoc sp. PCC 7120]
          Length = 474

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 57/382 (14%), Positives = 135/382 (35%), Gaps = 50/382 (13%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGI-----IKKFQVENGSQILQGTPLLTFEDIETT 93
           P+  SVS+ G +  +  V+++ +P  G+     +K+  V+ G ++ +G  +   ++ +T 
Sbjct: 58  PVITSVSAVGRLEPQGEVIKLSAPVGGMQSASRVKQLFVKEGERVRKGQVIAILDNHDTQ 117

Query: 94  -DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              ++  K  +   R ++   +                    + QL+  +G   ++ +++
Sbjct: 118 LAAVEEAKAKLLESRANLAQVRVGSPR---DIQAQTAVIARLQAQLVGEMGAQQASITRI 174

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            +           +       +   +  L    + +RA   + Q D      L+ + A+S
Sbjct: 175 ASQLSGEKVAQQALVNRLEAELVGQQDSLRATLNRIRAEQRNAQVDAGRYDFLYREGAIS 234

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN--- 269
           Q + +++      +  ++ E+    +  L  + +   EA       L  + + L +    
Sbjct: 235 QQERDRRRLTATTANQQVIESQAALRQALATLRQQVAEARANQMKTLASLQQQLIEARVT 294

Query: 270 --------QRTFADEMSKL-------------------------TILEKTREQKTILSPI 296
                   QR   +E ++L                            E   +   I +P 
Sbjct: 295 RDKTITTLQRQIDEEKARLKRLVEVSPTDVQMAQAQVSNAIANVRRAEAELKLSYIQAPS 354

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           AG I   + +S S  A  +  + ++    ++  I A+V    I  V+ G T T       
Sbjct: 355 AGEI--LKIYSKSGEAITADGIAEMGETEQMMII-AEVPEDSIGRVRIGQTVTANSD--N 409

Query: 357 DIREKKFKAIIEKIDPIISQQD 378
                + +  + +I   I ++D
Sbjct: 410 GAFSGEIRGTVTEIGRKIGKKD 431


>gi|150015128|ref|YP_001307382.1| RND family efflux transporter MFP subunit [Clostridium beijerinckii
           NCIMB 8052]
 gi|149901593|gb|ABR32426.1| efflux transporter, RND family, MFP subunit [Clostridium
           beijerinckii NCIMB 8052]
          Length = 478

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 57/407 (14%), Positives = 128/407 (31%), Gaps = 87/407 (21%)

Query: 39  PIEISVSSSGEILNEDNVV-EIKSPFSGI--------IKKFQVENGSQILQGTPLLTFED 89
            ++ +V   G+I+N  NV+ EIKS  S          +++ +V+ G ++  G  L   + 
Sbjct: 55  QVKSTVLCKGKIVNSVNVLGEIKSKESTNIYSTLNNPVQELKVKEGDKVKAGDVLAVLDS 114

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                 I+    +      +  T+                  +S +++  D L  Y++  
Sbjct: 115 NGLEKDIEQAIATADATEANAKTQ-----------------LDSAQKEYNDELNLYNNNS 157

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +                          +  + E   SL +  L    K     K LF   
Sbjct: 158 N-------------------------ADIKNAEETLSLAQITLDDKAKIYDKNKALFNAQ 192

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           A+S++DLN+ +     +  +  +     +N    +++  ++A  ++         +  Q 
Sbjct: 193 AISESDLNKIKIDYDTAKSDYEKAKTALENAKVKVDQALNKAKSDY---------ETAQT 243

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                 +   +   ++  +  TI +   G +    +            ++  + +     
Sbjct: 244 NYNNKSQRIAIEKQKQQLDDCTIKATSDGIVTNVNAV----VGNSGNGVLFQIENLDNIE 299

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP---------------II 374
           I   +    I +VK G  A ++     D     F   +E + P                 
Sbjct: 300 ITVPIKEVDIANVKVGQRAEIKTDATGDET---FAGEVESVSPAAKKGGGSVPQAQSENS 356

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             Q     +   +E  +K+ D      N  ++ G  A +       +
Sbjct: 357 QSQSQGASSDAGFEAKIKVDD-----TNENMKVGMSARINIITNEKS 398


>gi|15598332|ref|NP_251826.1| secretion protein [Pseudomonas aeruginosa PAO1]
 gi|254236105|ref|ZP_04929428.1| hypothetical protein PACG_02065 [Pseudomonas aeruginosa C3719]
 gi|254241830|ref|ZP_04935152.1| hypothetical protein PA2G_02547 [Pseudomonas aeruginosa 2192]
 gi|9949249|gb|AAG06524.1|AE004737_10 probable secretion protein [Pseudomonas aeruginosa PAO1]
 gi|126168036|gb|EAZ53547.1| hypothetical protein PACG_02065 [Pseudomonas aeruginosa C3719]
 gi|126195208|gb|EAZ59271.1| hypothetical protein PA2G_02547 [Pseudomonas aeruginosa 2192]
          Length = 355

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 106/319 (33%), Gaps = 22/319 (6%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I    S L     +  V +     + + L+           +     +++    L  
Sbjct: 54  QGEITRVASQLGARVEEVLVRDNQHVDKGQLLVRLEDADFKLAVERAQAALATREAELAQ 113

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             +++              +  +A L   Q DL   + L +   VS+  +       + +
Sbjct: 114 ARSKLVQQGSLIAASAADVNASQATLGRAQIDLNRAEALRKPGYVSEERVTTLTADNHVA 173

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             +L +   + +                       +  ++++ +   A   ++L   E  
Sbjct: 174 RSQLAKARADLEAQRVQ---------------RDTLGAEIKRLEAQIASARTELAQAEIN 218

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I SPI+G +   +S  +  Y Q    L+ +VP     +++A     Q+  ++ G 
Sbjct: 219 LSRTLIHSPISGLV-GQRSARNGQYVQVGTHLLSLVPDED-IWVQANFKETQVGRMRDGQ 276

Query: 347 TATVRFPHYADI-REKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDN 401
            A + F  + D   + +  ++        S    +  T  + +V+    +KI   A +  
Sbjct: 277 KARLTFDAFPDTPIDGRIDSLFAASGAQFSLLPPDNATGNFTKVVQRIPVKIVFEADNPL 336

Query: 402 NIELRNGFPAEVLFTAKNT 420
           +  +R G   E     ++ 
Sbjct: 337 HGRIRPGMSVEAEVELRDR 355



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 95/294 (32%), Gaps = 13/294 (4%)

Query: 14  PASLKR--MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           PA LKR     L  +G+I L  +     I   V S+     +  +  + S     +++  
Sbjct: 13  PAQLKRRLTVFLVAVGLIALAFFLHWWFIGRHVESTDNAYVQGEITRVASQLGARVEEVL 72

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V +   + +G  L+  ED +    ++  + ++      +   +S L  +     +   A 
Sbjct: 73  VRDNQHVDKGQLLVRLEDADFKLAVERAQAALATREAELAQARSKL--VQQGSLIAASAA 130

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +    Q      +     ++         Y S +   T     ++ R  L    + L A 
Sbjct: 131 DVNASQATLGRAQIDLNRAEALR---KPGYVSEERVTTLTADNHVARSQLAKARADLEAQ 187

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYD 249
                     +K L  + A ++ +L Q E  + ++ +   +   + ++        ++  
Sbjct: 188 RVQRDTLGAEIKRLEAQIASARTELAQAEINLSRTLIHSPISGLVGQRSARNGQYVQVGT 247

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                  +    +  + ++ Q     +  K  +            PI G I   
Sbjct: 248 HLLSLVPDEDIWVQANFKETQVGRMRDGQKARLTFDAFPDT----PIDGRIDSL 297


>gi|310814997|ref|YP_003962961.1| Type I secretion membrane fusion protein, HlyD [Ketogulonicigenium
           vulgare Y25]
 gi|308753732|gb|ADO41661.1| Type I secretion membrane fusion protein, HlyD [Ketogulonicigenium
           vulgare Y25]
          Length = 760

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 63/429 (14%), Positives = 125/429 (29%), Gaps = 56/429 (13%)

Query: 11  RNHPASLKRMTL-LSIIGIIGLITWSILLPIE-ISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++  A L R    L    ++ L     LLPI   +  + G +      + + +   G + 
Sbjct: 370 QDTLAGLMRSLWHLGAALLVILGGLGALLPIPPTATVARGTMTAPMAAIPLMTIEGGHVA 429

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
                    +     LL  +D       D        L+      +          D   
Sbjct: 430 DSFGAIDQAVFADQRLLGLDDRALRMQRDALLAEAALLQTRRLALQDPAFADAIAADRAA 489

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                 +E+                  G+S+    L+ +L R +     +  L    ++ 
Sbjct: 490 SLAVLAQEE-----------------TGLSARLSLLENRLPRAQRQAEAQAQLAASGAIP 532

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A   + Q+DL  +++                             I     +      L+
Sbjct: 533 AAAALAAQEDLGALQD------------------------SHAALIAGLAAIPERRAALF 568

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +  +       + +  +           ++   L+    Q  I +P+AG ++   + S 
Sbjct: 569 SQEAMRIQELASQTATQISAIDARLVAITAEGNTLDLRIAQYQITAPVAGRLLTYTA-SP 627

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               +  +    ++P          + P+Q  H+  G  A  R       +      I  
Sbjct: 628 GQILRPGEVFASLLPDGTPQQATLPIAPEQATHLHIGQPA--RLTAIGFQQ----AEISA 681

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            I  I ++   + Q + Y  V L++   A      +LR G P EV FT     L   +  
Sbjct: 682 HISAISAEPLLDDQGRAYLRVSLRLDHPA------DLRPGQPVEVRFTGPARPLLAALTD 735

Query: 429 PITDNWPKI 437
           P+T      
Sbjct: 736 PLTRALHTA 744


>gi|300867002|ref|ZP_07111672.1| putative HlyD family secretion protein [Oscillatoria sp. PCC 6506]
 gi|300334985|emb|CBN56838.1| putative HlyD family secretion protein [Oscillatoria sp. PCC 6506]
          Length = 508

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 137/391 (35%), Gaps = 34/391 (8%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           +  IE +++ SG I    N   +KSP    + +  V+ G  +  G  L+   +     ++
Sbjct: 53  IGNIEDTINESGTIEF-GNQQTLKSPLDVTVDEVLVQIGQSVTSGQSLIALRNPARETIL 111

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++++I+  +  ++  +  L     K  + ++              +Y+ +        
Sbjct: 112 GKQELAIQKEKLTLENLRQKLLEAQTKLSMAKETL------------QYYRSVRNDELLA 159

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           I     +L     ++     N    E K   L+ALL         +++  ++  +++ +L
Sbjct: 160 IQKQELTLANNRKKVIEAEENLAASERKLIDLKALLDKGYIAENEVRSQEDQIRIAKANL 219

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              +  +    LEL+    ++++  + + E    A  E      E+S +    Q +  D 
Sbjct: 220 RDAQFQINTDLLELKSLKIKRRDKEQELEEKAIAAESEVRQAQLEVSTNSRNLQTSLLDY 279

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
             K    E+  +   + +PI G ++  +  +    A+    L+ I+       ++ +++ 
Sbjct: 280 REK----EEELKNNIVTAPIDGKVLDIKVKNGDGVAR-GTELL-ILGDPSQELVKLQLST 333

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-------DPIISQQDNNLQTQEYYEV 389
                V+   +  +          K+F   +E +       D   S   +N   Q     
Sbjct: 334 LNAAKVRPNQSVRISIIG---PNSKQFLGRVESLFILAGSGDNNSSNNRSNQGGQATVPA 390

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +++   +       L  G    V    +  
Sbjct: 391 TVRLDIPS-----GTLIPGSQVNVEIILQQR 416


>gi|262281525|ref|ZP_06059305.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter calcoaceticus RUH2202]
 gi|262257113|gb|EEY75851.1| protein secretion efflux system ABC transporter membrane protein
           [Acinetobacter calcoaceticus RUH2202]
          Length = 85

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 27/84 (32%), Gaps = 4/84 (4%)

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE---LR 406
           V+   Y        K  +  I P   + +   Q Q YY V ++       +   +   + 
Sbjct: 2   VKITAYDYSIYGGLKGKVTVISPDTIRDEV-KQDQFYYRVYIRTDSDKLYNKQGKAYGIT 60

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPI 430
            G  A V       T+   ++ P 
Sbjct: 61  PGMVATVDIRTGQKTVLDYLLKPF 84


>gi|308068935|ref|YP_003870540.1| membrane-fusion protein [Paenibacillus polymyxa E681]
 gi|305858214|gb|ADM70002.1| Membrane-fusion protein [Paenibacillus polymyxa E681]
          Length = 486

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 56/359 (15%), Positives = 123/359 (34%), Gaps = 59/359 (16%)

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V+ G ++ +G  L   +  E              ++  I +   +L+   +K   LEK
Sbjct: 94  VNVKAGDKVKKGQVLALLDSSE--------------IKMQIQSASDSLEISKSKLAELEK 139

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             ++ + ++                   ++V R+     T   S  L   + + K S  +
Sbjct: 140 GPKAEDIEI-----------------QKTNVLRAKMAVDTAQESFELEEAESQKKVS--Q 180

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L   +K     K L +  AVS ++L Q E+ + K+  +      + + ++        
Sbjct: 181 KQLEQARKAYEDQKFLHDAGAVSNSELEQAEQALDKAQTDYDNLNLQFRKIMSQKRRTIS 240

Query: 250 EANLEFANYLKEI--------SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           EA + +   L E+        +  ++ ++       ++L   +    +  + +P  G I+
Sbjct: 241 EAEIGYRAALAELHKTQVPADASSIQSSRIEVRRLATELEQKKNELNKLQVTAPWDGVIL 300

Query: 302 YNQSFSSSNYA-QQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
                   +     + P + +         +  KV+   I  VKKG TA +    Y    
Sbjct: 301 KVN----GDVGTSPTAPFITMNNSDSNDLKVVVKVSQNDIVKVKKGLTAVLSTNAYP--- 353

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            + F   ++ + P  S  +          +   + +L+  D   +L+ G    V     
Sbjct: 354 GESFPGKVQFVSPEASTDEG---------MTTYLMELSVHDPKGKLKTGMIMNVAVILG 403


>gi|268609107|ref|ZP_06142834.1| hypothetical protein RflaF_06356 [Ruminococcus flavefaciens FD-1]
          Length = 479

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 112/355 (31%), Gaps = 45/355 (12%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + K  V+ G ++ +G  L  F++    +  D    S    +          D  N  + +
Sbjct: 79  VTKLNVKKGDEVKKGDILCIFDNTTLQEEFDALSASSSKTQ----------DAANYSHGI 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            ++  E                  +     IS   + +   + +    Y +      + +
Sbjct: 129 NQRNLE---------------KAKRDRANAISQAQQDINDAVAKRDQAYADYNAKIQRYN 173

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN---MLRH 243
            +   +     ++    +  E    ++    + +       +EL  +  +       +  
Sbjct: 174 DINQEIDRTYAEMIDAAD-EEAAKAAETKWEEFKAQAAALNVELEADHAQLAGYDDAITA 232

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEM--SKLTILEKTREQKTILSPIAGTIV 301
            N  YD       + L+     ++Q Q    DE    KL  L +  +  T+++PI G I 
Sbjct: 233 ANRAYDTIVKNADDALQNAQDTVDQEQYAAVDEETTEKLKKLSQQIDDCTVIAPIDGIIT 292

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                        S  +M  V  +    +R KV+   I  + KG +A +           
Sbjct: 293 ELNISE--GTLPTSNIIMT-VSDASSLIVRGKVSENDILSIIKGMSAEITASALGKD--- 346

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                +E+I+   + ++ +  +   Y V +   D        +L  G  A V   
Sbjct: 347 VINGKVERIEMSSNGKEADGSSSG-YAVEVSFDDS-------KLLLGMNANVKIV 393


>gi|218890663|ref|YP_002439527.1| putative secretion protein [Pseudomonas aeruginosa LESB58]
 gi|218770886|emb|CAW26651.1| probable secretion protein [Pseudomonas aeruginosa LESB58]
          Length = 355

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 106/319 (33%), Gaps = 22/319 (6%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I    S L     +  V +     + + L+           +     +++    L  
Sbjct: 54  QGEITRVASQLGARVEEVLVRDNQHVDKGQLLVRLEDADFKLAVERAQATLATREAELAQ 113

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             +++              +  +A L   Q DL   + L +   VS+  +       + +
Sbjct: 114 ARSKLVQQGSLIAASAADVNASQATLGRAQIDLNRAEALRKPGYVSEERVTTLTADNHVA 173

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             +L +   + +                       +  ++++ +   A   ++L   E  
Sbjct: 174 RSQLAKARADLEAQRVQ---------------RDTLGAEIKRLEAQIASARTELAQAEIN 218

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I SPI+G +   +S  +  Y Q    L+ +VP     +++A     Q+  ++ G 
Sbjct: 219 LSRTLIHSPISGLV-GQRSARNGQYVQVGTHLLSLVPDED-IWVQANFKETQVGRMRDGQ 276

Query: 347 TATVRFPHYADI-REKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDN 401
            A + F  + D   + +  ++        S    +  T  + +V+    +KI   A +  
Sbjct: 277 KARLTFDAFPDTPIDGRIDSLFAASGAQFSLLPPDNATGNFTKVVQRIPVKIVFEADNPL 336

Query: 402 NIELRNGFPAEVLFTAKNT 420
           +  +R G   E     ++ 
Sbjct: 337 HGRIRPGMSVEAEVELRDR 355



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 95/301 (31%), Gaps = 16/301 (5%)

Query: 10  KRNHP-----ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           +RN P        +    L  +G+I L  +     I   V S+     +  +  + S   
Sbjct: 6   RRNTPPMPAQLKRRLTVFLVAVGLIALAFFLHWWFIGRHVESTNNAYVQGEITRVASQLG 65

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
             +++  V +   + +G  L+  ED +    ++  + ++      +   +S L  +    
Sbjct: 66  ARVEEVLVRDNQHVDKGQLLVRLEDADFKLAVERAQATLATREAELAQARSKL--VQQGS 123

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +   A +    Q      +     ++         Y S +   T     ++ R  L   
Sbjct: 124 LIAASAADVNASQATLGRAQIDLNRAEALR---KPGYVSEERVTTLTADNHVARSQLAKA 180

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR 242
            + L A           +K L  + A ++ +L Q E  + ++ +   +   + ++     
Sbjct: 181 RADLEAQRVQRDTLGAEIKRLEAQIASARTELAQAEINLSRTLIHSPISGLVGQRSARNG 240

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              ++         +    +  + ++ Q     +  K  +            PI G I  
Sbjct: 241 QYVQVGTHLLSLVPDEDIWVQANFKETQVGRMRDGQKARLTFDAFPDT----PIDGRIDS 296

Query: 303 N 303
            
Sbjct: 297 L 297


>gi|116051132|ref|YP_790037.1| putative secretion protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115586353|gb|ABJ12368.1| putative secretion protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 355

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 105/319 (32%), Gaps = 22/319 (6%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I    S L     +  V +     + + L+           +     +++    L  
Sbjct: 54  QGEITRVASQLGARVEEVLVRDNQHVDKGQLLVRLEDADFKLAVERAQAALATREAELAQ 113

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             +++              +  +A L   Q DL   + L +   VS+  +       + +
Sbjct: 114 ARSKLVQQGSLIAASAADVNASQATLGRAQIDLNRAEALRKPGYVSEERVTTLTADNHVA 173

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             +L +   + +                       +  ++++ +   A   ++L   E  
Sbjct: 174 RSQLAKARADLEAQRVQ---------------RDTLGAEIKRLEAQIASARTELAQAEIN 218

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I SPI G +   +S  +  Y Q    L+ +VP     +++A     Q+  ++ G 
Sbjct: 219 LSRTLIHSPINGLV-GQRSARNGQYVQVGTHLLSLVPDED-IWVQANFKETQVGRMRDGQ 276

Query: 347 TATVRFPHYADI-REKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDN 401
            A + F  + D   + +  ++        S    +  T  + +V+    +KI   A +  
Sbjct: 277 KARLTFDAFPDTPIDGRIDSLFAASGAQFSLLPPDNATGNFTKVVQRIPVKIVFEADNPL 336

Query: 402 NIELRNGFPAEVLFTAKNT 420
           +  +R G   E     ++ 
Sbjct: 337 HGRIRPGMSVEAEVELRDR 355



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 95/294 (32%), Gaps = 13/294 (4%)

Query: 14  PASLKR--MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           PA LKR     L  +G+I L  +     I   V S+     +  +  + S     +++  
Sbjct: 13  PAQLKRRLTVFLVAVGLIALAFFLHWWFIGRHVESTDNAYVQGEITRVASQLGARVEEVL 72

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V +   + +G  L+  ED +    ++  + ++      +   +S L  +     +   A 
Sbjct: 73  VRDNQHVDKGQLLVRLEDADFKLAVERAQAALATREAELAQARSKL--VQQGSLIAASAA 130

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +    Q      +     ++         Y S +   T     ++ R  L    + L A 
Sbjct: 131 DVNASQATLGRAQIDLNRAEALR---KPGYVSEERVTTLTADNHVARSQLAKARADLEAQ 187

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYD 249
                     +K L  + A ++ +L Q E  + ++ +   +   + ++        ++  
Sbjct: 188 RVQRDTLGAEIKRLEAQIASARTELAQAEINLSRTLIHSPINGLVGQRSARNGQYVQVGT 247

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                  +    +  + ++ Q     +  K  +            PI G I   
Sbjct: 248 HLLSLVPDEDIWVQANFKETQVGRMRDGQKARLTFDAFPDT----PIDGRIDSL 297


>gi|298492368|ref|YP_003722545.1| DevB family ABC exporter membrane fusion protein ['Nostoc azollae'
           0708]
 gi|298234286|gb|ADI65422.1| ABC exporter membrane fusion protein, DevB family ['Nostoc azollae'
           0708]
          Length = 414

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 61/389 (15%), Positives = 131/389 (33%), Gaps = 56/389 (14%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPF---SGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
            P++++V++ G +  +  +  + +P       ++K  V  G ++  G  L   +D     
Sbjct: 71  TPVKLAVTALGRLQPQGKITYLSAPNSINGVRVEKLLVSEGDEVKPGQVLAYLDD-YARS 129

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            I +K+   K L                         +++  Q+            K   
Sbjct: 130 KIAIKQAFDKLLIA-----------------------KAKLAQVKAGAKPGDINAQKATM 166

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             + S  +      T                + ++A + + QK+    + L++  A+S +
Sbjct: 167 ARLDSQLKGENAAQT-------------ATINRIQAEVDNAQKESDRYQQLYKDGAISAS 213

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             + +   +  S  +L E           + +   EA  +  +  +    D+   +    
Sbjct: 214 IADTKALQLKTSQQQLTEAKATLIRTQNTLQDQIKEATAKLNSIKEVRGVDVALAEGEVK 273

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQ-----SFSSSNYAQQSQPLMKIVPHSKLTY 329
              + +   +   E   I SPI G ++  +       ++S +A+  +             
Sbjct: 274 SIHTVIQQAKADHELTYIKSPIDGRVLKIRSKNGEVITTSGFAELGKT--------AEMS 325

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEYY 387
           + A+V    IQ V+ G  A +    + +      KAI  +ID   I S   N+   ++  
Sbjct: 326 VLAEVYQTDIQKVRVGQKAIITSATFPEKIHGTVKAIGWQIDKQNIFSINPNSDTDRKIV 385

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
           EV + I + A S     L N    +V   
Sbjct: 386 EVKISIDNPADSKKVSRLTN-LQVDVAIQ 413


>gi|308069390|ref|YP_003870995.1| membrane-fusion protein [Paenibacillus polymyxa E681]
 gi|305858669|gb|ADM70457.1| Membrane-fusion protein [Paenibacillus polymyxa E681]
          Length = 488

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 135/391 (34%), Gaps = 60/391 (15%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +G +   + V  +     G + +  V+ GS++ +G  L   +D              K++
Sbjct: 54  TGTVTPSETVNIV-PKVGGKVVELPVDIGSEVKKGQVLFKLDD--------------KDM 98

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R ++   ++A           + + ES   Q    L +  S   +     I+    ++  
Sbjct: 99  RNNVAKARAAAAAAAAGVSTAQASHESTMVQANSGLVQSKSGVIQS-QSAINQAQGAINQ 157

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV--- 223
             T +           N     +  L+  QK++T  ++LF+  A +Q  L Q +  V   
Sbjct: 158 ATTAVEQATHGVSSAANTVKQTQQALADAQKNVTRTQSLFDAGASTQAQLEQAKTAVVNA 217

Query: 224 -------YKSTLELRENIHEQKNMLRHINELYDEANLEFANY------------LKEISR 264
                    +    ++ +   +  L      YD A   ++N             + + + 
Sbjct: 218 EAAYNNAKNAQANAQDQLVAAQKALTTARNSYDSAKNSYSNANSGYSNAQNQLKVSQNTA 277

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--V 322
            +E +Q++       + I +   +   + SPI G IV  ++           P + I  +
Sbjct: 278 VIESSQQSLKQAQLNVNIAQDALDDTVVTSPING-IVGTKNAEVGEMVSAQSPALVIANL 336

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                      V  +QI +VK G    VR      +        ++ + P+ +       
Sbjct: 337 STVNTLI---YVPAEQINNVKAGDKVQVRVAASNIVTT----GTVKNVSPLDASGKG--- 386

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
               Y V + +     ++ + +L++G  A++
Sbjct: 387 ----YPVKISV-----ANPDTKLKSGMLADI 408


>gi|172036922|ref|YP_001803423.1| hypothetical protein cce_2007 [Cyanothece sp. ATCC 51142]
 gi|171698376|gb|ACB51357.1| hypothetical protein cce_2007 [Cyanothece sp. ATCC 51142]
          Length = 519

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/373 (11%), Positives = 126/373 (33%), Gaps = 28/373 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V   G++        + S  +G ++K  V+ G  +  G  +   +D +    +   +  +
Sbjct: 93  VRLLGQVE-AGAKATLSSQVAGTVEKILVKEGDNVTPGMIVAILDDADGQIALAEAQARL 151

Query: 104 KNLRCHIDT-EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
              + +++  E      +  +      A ++RE +  D L +  S    +     + +  
Sbjct: 152 VQEQSNLERLEVGTRSEIIAQRKAELTAAQAREREAQDNLERLISLQPDLMMQRQAELEA 211

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +   +    +        L  + +L    L   +      +N   +   ++  L  +E  
Sbjct: 212 ARS-REKEAKDNLQRIKGLSLEGALSERALVEAEARADETRN---QRLRAEASLKAEETS 267

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
             K   + +  +   K+    +  +  EA         +  R + +  +   ++      
Sbjct: 268 TRKDIAQAQTRVDNAKSDRLRVTAILAEAQAGPTKEEMDAQRGVVKAAQAAVEQ------ 321

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +   E+  I + ++G +   Q+    +Y + + P++ +V   +   I  ++       V
Sbjct: 322 AKLRLERTKIRASVSGVVQSRQAD-PGDYVEVNDPILSLV-SDRSLDIFLEIPESLSGQV 379

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
            +G    +      +  +      + +I  ++   ++N + Q    V + ++     +  
Sbjct: 380 SQGMQVNLFARALPNWEQ------LTQITAVVPSANSNSRRQ---LVRVSLS-----NPP 425

Query: 403 IELRNGFPAEVLF 415
            +L  G   +   
Sbjct: 426 EKLLPGMAIQADL 438


>gi|303249994|ref|ZP_07336196.1| hypothetical protein APP6_1405 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303253166|ref|ZP_07339315.1| hypothetical protein APP2_0471 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307248808|ref|ZP_07530821.1| hypothetical protein appser2_17740 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307253423|ref|ZP_07535294.1| hypothetical protein appser6_19170 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302647848|gb|EFL78055.1| hypothetical protein APP2_0471 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302651057|gb|EFL81211.1| hypothetical protein APP6_1405 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306854735|gb|EFM86925.1| hypothetical protein appser2_17740 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306859102|gb|EFM91144.1| hypothetical protein appser6_19170 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 318

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 101/304 (33%), Gaps = 18/304 (5%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           ++ +        +V     ++   +L     ++        D +   + +      + + 
Sbjct: 6   INAIKTQIQKLDRVIILVKANQTETLANLEKQIAKNRKIYSDTQKYFAEVTKSTEDYYQT 65

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L   + L +K   + +++   +R  Y     LR ++ E    L            E  + 
Sbjct: 66  LKKYEELMKKGYSANDEV-ALQRSRYFDQKSLRNSLQE---KLIQQESAIISLENEVESR 121

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             +    + + +    D   +L   E +  +  + +P+ G +      +     ++   L
Sbjct: 122 KTDFQNQIIRYELQQNDLEIRLMEFE-SVSELIVNAPLDGLVESVSV-TVGQVIREGDTL 179

Query: 319 MKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            +++P +     +   V    I  +       +R+  +   +  +F+  I+ I  I +  
Sbjct: 180 AQMIPANKGEYQLVMWVPNSAISFINPEDKLNIRYEAFPFEKFGQFEGSIKHISTIPASL 239

Query: 378 DN---------NLQTQEYYEVILKITDLAFSDNNIEL--RNGFPAEVLFTAKNTTLAQEI 426
                             Y++++ I D     NN  L   +G  AE     +N  L + I
Sbjct: 240 QELAFYKNIPAADPNNPLYKIVVAIADQKVEYNNTSLAFLSGMKAEATLFLENRKLYEWI 299

Query: 427 IHPI 430
           + P+
Sbjct: 300 LFPL 303


>gi|148990051|ref|ZP_01821305.1| BlpC ABC transporter [Streptococcus pneumoniae SP6-BS73]
 gi|147924577|gb|EDK75664.1| BlpC ABC transporter [Streptococcus pneumoniae SP6-BS73]
          Length = 453

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 62/439 (14%), Positives = 147/439 (33%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEITPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +          +  ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALETQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNR 178
              E        +  +Q  D       T ++V N     +S   +++ ++T+++      
Sbjct: 132 SEDEFGYHNTFMNFTKQSHDIELGISKTNTEVSNQANLTNSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +     +++ + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDTIVNKRARLPTGNPHQSILNRYLIASQEQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+      +++  + N L  +  +    +L+  S+     +    +   +L    +    
Sbjct: 252 LKIQQAGIRSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLGN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P  G +  N  F   N       + +I P    ++   I   V+   +  + KG 
Sbjct: 312 NTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGNHGT-TIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|148998207|ref|ZP_01825676.1| BlpC ABC transporter [Streptococcus pneumoniae SP11-BS70]
 gi|168576564|ref|ZP_02722438.1| BlpC ABC transporter [Streptococcus pneumoniae MLV-016]
 gi|307067157|ref|YP_003876123.1| hypothetical protein SPAP_0528 [Streptococcus pneumoniae AP200]
 gi|147755850|gb|EDK62894.1| BlpC ABC transporter [Streptococcus pneumoniae SP11-BS70]
 gi|183577762|gb|EDT98290.1| BlpC ABC transporter [Streptococcus pneumoniae MLV-016]
 gi|306408694|gb|ADM84121.1| hypothetical protein SPAP_0528 [Streptococcus pneumoniae AP200]
          Length = 453

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 69/440 (15%), Positives = 146/440 (33%), Gaps = 32/440 (7%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGII 67
            +R H  +   +  LS++    LI  S++   EI+V+S GEI     +  I+S   + I+
Sbjct: 13  QRRYHNYATVFIIPLSLLFTFILIF-SLVATKEITVTSQGEITPTSVIASIQSTSDNPIL 71

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V N   + +G  L+ + +             ++ L    +        L    D+ 
Sbjct: 72  ANHLVAN-QVVEKGDLLIKYSETMEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLF 130

Query: 128 EKAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLN 177
               E        +  +Q  D       T ++V N     +S   +++ ++T+++     
Sbjct: 131 SSEDEFGYHNTFMNFTKQSHDIELGISKTNTEVSNQANLTNSSSSAIEQEITKVQQQIGE 190

Query: 178 RLDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQNDLNQ-QERIVYKSTLELRENIH 235
             +L +     RA L +     +++ + L      +Q    +     + +S   L  +I 
Sbjct: 191 YQELRDAIINNRARLPTGNPHQSILNRYLIASQGQTQGTAEEPFLSQINQSIASLESSIA 250

Query: 236 EQKNMLRHI-------NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             K     I       N L  +  +    +L+  S+     +    +   +L    +  E
Sbjct: 251 SLKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLE 310

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKG 345
             T+ +P  G +  N  F   N       + +I P    ++   I   V+   +  + KG
Sbjct: 311 NNTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKG 370

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            T  ++     +         ++ ID   ++ +     +      L   D         +
Sbjct: 371 QTVRLKLEKIGNHGT-TIIGQLQSIDQTPTRTEQGNLFKLTALAKLSNEDSKL------I 423

Query: 406 RNGFPAEVLFTAKNTTLAQE 425
           + G    V       T    
Sbjct: 424 QYGLQGRVTSVTTKKTYFDY 443


>gi|75909791|ref|YP_324087.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|2673751|emb|CAA05975.1| membrane fusion protein [Anabaena variabilis ATCC 29413]
 gi|75703516|gb|ABA23192.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 474

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 56/382 (14%), Positives = 133/382 (34%), Gaps = 50/382 (13%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGI-----IKKFQVENGSQILQGTPLLTFEDIETT 93
           P+  SVS+ G +  +  V+++ +P  G+     +K+  V+ G ++ +G  +   ++ +T 
Sbjct: 58  PVVTSVSAVGRLEPQGEVIKLSAPVGGMQSASRVKQLFVKEGERVRKGQIIAILDNHDTQ 117

Query: 94  -DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              ++  K  +   R ++   +                    + QL+       +T +++
Sbjct: 118 LAAVEEAKAKLLESRANLAQVRVGSPR---DIQAQTAVIARLQAQLVGERDAQQATITRI 174

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            +   +       +       +   +  L    + +RA   + Q D      L+ + A+S
Sbjct: 175 ASQLSAEKVAQQALVNRLEAELLGQQDSLRATLNRIRAEQRNAQVDAGRYDFLYREGAIS 234

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN--- 269
           Q + +++      +  ++ E+    +  L  + +   EA       L  + + L +    
Sbjct: 235 QQERDRRRLTATTANQQVIESQATLRQALATLRQQVAEARANQMKTLASLQQQLIEARVT 294

Query: 270 --------QRTFADEMSKL-------------------------TILEKTREQKTILSPI 296
                   QR   +E ++L                            E   +   I +P 
Sbjct: 295 RDKTVATLQRQIDEEKARLKRLVEVSPTDVQMAQAQVSNAIANVRKAEAELKLSYIQAPS 354

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           AG I   + +S S  A  +  + ++    ++  I A+V    I  V+ G   T       
Sbjct: 355 AGEI--LKIYSKSGEAITADGIAEMGETEQMMII-AEVPEDSIGRVRIGQNVTA--SSDN 409

Query: 357 DIREKKFKAIIEKIDPIISQQD 378
                + +  + +I   I ++D
Sbjct: 410 GAFSGEIRGTVTEIGRKIGKKD 431


>gi|261253366|ref|ZP_05945939.1| multidrug resistance protein A [Vibrio orientalis CIP 102891]
 gi|260936757|gb|EEX92746.1| multidrug resistance protein A [Vibrio orientalis CIP 102891]
          Length = 352

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 50/374 (13%), Positives = 116/374 (31%), Gaps = 82/374 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + ++  I    SG I K  V +   + QG  L   +D              ++ +  +D 
Sbjct: 52  QGDITTISPKVSGYIVKSYVTDNQVVKQGDLLAQIDD--------------RDYQATLDQ 97

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             + L                                  V    ++++Y    ++ +++ 
Sbjct: 98  ANAHL---------------------------------NVAQSSVNNLYAQQTLQRSQIN 124

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                    +++    +A      + +   ++L ++N  SQ++++               
Sbjct: 125 QA-------KSQVDSAQAEYDRAIQQVARSRSLLKRNYASQDEVD--------------S 163

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + +QK  L  + +          + L  I+ ++EQ + +  +  ++L   +       I
Sbjct: 164 MLAQQKVTLAQLEQAKANLAA-ANDQLVVIASEVEQAKASVTEANAQLEQAQLNLNYTKI 222

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G I   +S       Q   PLM +VP +   +I A     Q+  + +G    V  
Sbjct: 223 YAPADGVI-GKRSVREGLLVQAGTPLMSLVP-NNAVWIEANFKETQLSGIHQGQKVEVEL 280

Query: 353 PHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             +        + +++   P           +      T+    V +KI      +    
Sbjct: 281 DAFPGQT---LEGVVDSFSPATGAKFALLPPENATGNFTKIVQRVPVKIVIPDQKELQGR 337

Query: 405 LRNGFPAEVLFTAK 418
           L  G         +
Sbjct: 338 LLPGLSVVTTIDTR 351


>gi|317053254|ref|YP_004119021.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
 gi|316952993|gb|ADU72465.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
          Length = 372

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 62/428 (14%), Positives = 138/428 (32%), Gaps = 82/428 (19%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPI-----EISVSSSGEILNEDNVV 57
               +   +  P +L  M  L II +   I W           +  V +        ++V
Sbjct: 11  QTFTRRYAKPRPRTLMIMIFLLIIALTWGIYWWTTARWMTDTDDAYVRA--------DIV 62

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            +    SG +   +V++  ++  G  L   +D E    +      +K+        ++ +
Sbjct: 63  TLAPRVSGYLSAVEVQDNQRVSAGQVLARIDDNEYQARVSQADAVVKSAEAQKRLRQAQI 122

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             L+ +          ++ ++ + +   H+  ++     + +  +     +++  S    
Sbjct: 123 FNLDARQ-------VQQKNRVDEAMATVHAALAESARAVLEAQRQQR--LVSQHVSSEQQ 173

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
                 + + + A ++  Q  L + +         QN +   ER         +  + EQ
Sbjct: 174 LESANAQMTKMVASVTQAQAALAITRQ--------QNAVLASER---------QAAVAEQ 216

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            N    + +   +  L   +                                  I SPI 
Sbjct: 217 DNADAALRQAQAQRELARID-----------------------------LASTAITSPIT 247

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT+   ++  +  Y +   PL+ +VP +   Y+ A     Q+ H+  G  A +R   Y  
Sbjct: 248 GTV-GQRAIRAGQYVETGAPLLAVVPDN--VYVIANFKETQLDHMHIGQPAEIRVDAYGG 304

Query: 358 IREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGF 409
                F+  ++   P    Q      +  T  + +++    +KI   A  +   E+R G 
Sbjct: 305 RH---FRGTVDSFAPASGAQFALLPPDNATGNFTKIVQRMPVKIRLTAGQNAQDEIRPGM 361

Query: 410 PAEVLFTA 417
              V    
Sbjct: 362 SVVVTVDT 369


>gi|169832543|ref|YP_001694026.1| BlpC ABC transporter [Streptococcus pneumoniae Hungary19A-6]
 gi|182683470|ref|YP_001835217.1| blpC ABC transporter [Streptococcus pneumoniae CGSP14]
 gi|303254211|ref|ZP_07340322.1| blpC ABC transporter [Streptococcus pneumoniae BS455]
 gi|303260642|ref|ZP_07346606.1| blpC ABC transporter [Streptococcus pneumoniae SP-BS293]
 gi|303263087|ref|ZP_07349018.1| blpC ABC transporter [Streptococcus pneumoniae SP14-BS292]
 gi|303265354|ref|ZP_07351263.1| blpC ABC transporter [Streptococcus pneumoniae BS397]
 gi|303267110|ref|ZP_07352980.1| blpC ABC transporter [Streptococcus pneumoniae BS457]
 gi|303269355|ref|ZP_07355127.1| blpC ABC transporter [Streptococcus pneumoniae BS458]
 gi|168995045|gb|ACA35657.1| BlpC ABC transporter [Streptococcus pneumoniae Hungary19A-6]
 gi|182628804|gb|ACB89752.1| blpC ABC transporter [Streptococcus pneumoniae CGSP14]
 gi|301801416|emb|CBW34102.1| ABC transporter BlpB [Streptococcus pneumoniae INV200]
 gi|302598814|gb|EFL65849.1| blpC ABC transporter [Streptococcus pneumoniae BS455]
 gi|302635787|gb|EFL66291.1| blpC ABC transporter [Streptococcus pneumoniae SP14-BS292]
 gi|302638232|gb|EFL68703.1| blpC ABC transporter [Streptococcus pneumoniae SP-BS293]
 gi|302641127|gb|EFL71502.1| blpC ABC transporter [Streptococcus pneumoniae BS458]
 gi|302643372|gb|EFL73649.1| blpC ABC transporter [Streptococcus pneumoniae BS457]
 gi|302645126|gb|EFL75364.1| blpC ABC transporter [Streptococcus pneumoniae BS397]
          Length = 453

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 62/439 (14%), Positives = 146/439 (33%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEITPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +          +  ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALETQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNR 178
              E        +  +Q  D       T ++V N     +S   +++ ++T+++      
Sbjct: 132 SEDEFGYHNTFMNFTKQSHDIELGISKTNTEVSNQANLTNSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +     +++ + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDTIVNKRARLPTGNPHQSILNRYLIASQEQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +    
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLGN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P  G +  N  F   N       + +I P    ++   I   V+   +  + KG 
Sbjct: 312 NTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGNHGT-TIIGQLQSIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|170078330|ref|YP_001734968.1| HlyD family secretion protein [Synechococcus sp. PCC 7002]
 gi|169885999|gb|ACA99712.1| HlyD family secretion protein, putative [Synechococcus sp. PCC
           7002]
          Length = 413

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 49/378 (12%), Positives = 113/378 (29%), Gaps = 43/378 (11%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I +   G ++   V  G  + +G  ++T +  E    +D  +  I   +  ++  +  + 
Sbjct: 58  ISAKVGGKVEAIAVREGDTVQKGQVIVTLDSAELQASLDGAQARINAAQQQVNQAQLQIT 117

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            + N+           E QL     +  +           +  ++   +           
Sbjct: 118 VIENQIT---------EAQLTQRQAQDDTAGRVNAAQANVAAAKAQLAQAQAQ------- 161

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
                    L A L+  + D    + L+    VS+  L Q +     +   L        
Sbjct: 162 ------VKQLEAELALAKADGDRFQELYASGVVSKQRLEQAQTQYLSTKENLDARRAVVA 215

Query: 239 NMLRHINELYDEANLEFANY----LKEISRDLEQNQ------------RTFADEMSKLTI 282
                +           A+     ++ +     Q Q                +  +    
Sbjct: 216 AAAEQVKTAEGNLTQTQASQFNPDIRAVQVQRLQTQLVQAQAQLSAAQAQVQNAQANYNE 275

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
           +    +   ++SPI G ++  ++          + L+ +V      Y+R  +  K++  +
Sbjct: 276 IAAKLQDLELVSPIDGVVLT-RTAEPGEVVATGKTLLTLVNLGD-VYLRGFIPEKEVGAI 333

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           + G  A V         E+  +A +  ID   S    N+  ++     +    L   +  
Sbjct: 334 QIGQAAAVFL---DSAPEEPLRATVAAIDTEASFTPENIYFRDDRVTQVFGLKLQIENEA 390

Query: 403 IELRNGFPAEVLFTAKNT 420
              + G PA+       T
Sbjct: 391 GFAKPGMPADATILTDET 408


>gi|218512444|ref|ZP_03509284.1| putative protein secretion protein, HlyD family [Rhizobium etli
           8C-3]
          Length = 129

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 33/124 (26%), Gaps = 9/124 (7%)

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS------- 375
           P +        +  + I  V  G  A ++   Y   +       +  I            
Sbjct: 2   PINVPLEAEVSINTRDIGRVAVGKEARIKLDAYPFQKYGTASGEVRTISQDTFLTGQQEQ 61

Query: 376 QQDNNLQTQEYYEVILKITD--LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
                     +++  + + D  L  +D  + L  G          N T+    ++P+   
Sbjct: 62  TATPGQPAAPFFKARILLADTRLNVADVPVRLLPGMTVSTEIKVGNRTVISYFLYPLLRG 121

Query: 434 WPKI 437
               
Sbjct: 122 LDNA 125


>gi|149012592|ref|ZP_01833589.1| BlpC ABC transporter [Streptococcus pneumoniae SP19-BS75]
 gi|147763397|gb|EDK70334.1| BlpC ABC transporter [Streptococcus pneumoniae SP19-BS75]
          Length = 453

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 63/439 (14%), Positives = 147/439 (33%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEIAPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +          +  ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALETQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNR 178
              E        +  +Q  D       T ++V N     +S   +++ ++T+++      
Sbjct: 132 SEDEFGYHNTFMNFTKQSHDIELGISKTNTEVSNQANLTNSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +     +++ + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIVNKRARLPTGNPHQSILNRYLIASQEQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKLQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P  G +  N  F   N       + +I P    ++   I   V+   +  + KG 
Sbjct: 312 NTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPIITDTREVLITYYVSSDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGNHGT-TIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|221133885|ref|ZP_03560190.1| membrane-fusion protein [Glaciecola sp. HTCC2999]
          Length = 406

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 64/405 (15%), Positives = 114/405 (28%), Gaps = 43/405 (10%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +  LS    + L TW +    E + +  G          I SP+ GII    V +   ++
Sbjct: 31  LVWLSCGVFVLLTTWVLTRQYEQTKAIQGVTHYTQGEFSIVSPYQGIITDIHVTSNQTVV 90

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L T                                           A    ++   
Sbjct: 91  KGQALFTVN--------------------------------MQPTSGFTPADIQLQQTQY 118

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           + +  +     K  +    +  + LK      R +  N   L  +  LL A   + Q   
Sbjct: 119 NTIQTHLLNKQKNIDVTFIAEKKYLKQSADNTRRVINN---LNEQLVLLNADHLAQQAQG 175

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             M  L  K  VS + + Q +         ++  I + +  L            +  + +
Sbjct: 176 QRMILLLNKGIVSHHQVEQHQVEFRG----IKSRILQIEQSLIERGSQLALFKQQLVDLV 231

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            +    L   +    +  +KL  L+       I +P  G I      +        Q L 
Sbjct: 232 SKRDEKLANIEGHLVENSTKLQALKFQTS-TMITAPKDGVITQL-VLNEGATIFNQQKLA 289

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IVP       R  +       +       ++   Y      + ++ I  ID    Q   
Sbjct: 290 VIVPEHGELVGRLVIPSVATADINIHQLVHLQMKSYPHRIYGQLQSTITSIDKPSFQTQP 349

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           N    +    I ++     S   I L +G     L   +   L Q
Sbjct: 350 NGIHAQ--VAIPEVWQTNKSAQEIILTSGMEFTALIVIEQYPLWQ 392


>gi|332664512|ref|YP_004447300.1| secretion protein HlyD family protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332333326|gb|AEE50427.1| secretion protein HlyD family protein [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 382

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 107/339 (31%), Gaps = 39/339 (11%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           ++   T LI  + ++   +      +   L  LN    +L+   E    Q+ +    +H 
Sbjct: 64  DNTLITALIQGQVIAHNLVEDRPVAKGQKLISLNTG--ILDAEREKLLLQIEEAENAWHD 121

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +         R+   +            +L+ K   L  +L    K       L++
Sbjct: 122 LAILLLKSEQKPALRTSVYQQA-FSQYSREFSNLDIKKQYLFTVLERVHK-------LYK 173

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           ++ V++ D  + +     S  ELR    +Q+                     K    + +
Sbjct: 174 EHVVAKVDFEKAQLDADLSASELRLLEEQQR---------------------KSWELESQ 212

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q  +   D  SKL +LE+  +   I +P  G +V        +Y    Q L  I      
Sbjct: 213 QVHQQLLDLKSKLALLERQSKDYAIYAPCDGILVQTTGLKPGSYVMPGQQLAFIS-THDS 271

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
                 +   QI ++++G   +++   Y           + ++      +   +     +
Sbjct: 272 LLAEIHIPTAQIGYIRRGMPVSLQVDAYNYHEWGAISGTVHQV----PNEVKIINETPVF 327

Query: 388 EVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLA 423
              +K+        N    +L+ G      F  +  +L 
Sbjct: 328 VTQVKLHQKELKLKNGYVGKLKKGMIIRAQFFLQKRSLF 366


>gi|300865331|ref|ZP_07110142.1| putative Efflux transporter, RND family, MFP subunit [Oscillatoria
           sp. PCC 6506]
 gi|300336634|emb|CBN55292.1| putative Efflux transporter, RND family, MFP subunit [Oscillatoria
           sp. PCC 6506]
          Length = 600

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 53/375 (14%), Positives = 125/375 (33%), Gaps = 15/375 (4%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           +  ++ S+  +G +   D +  +       IK+  V+ G  + +G  +   +D      +
Sbjct: 136 VASVDRSIEGTGTVAAYDLLPVLAQVNGLQIKQVLVKEGDAVEKGQVMAILDDSVLRSQL 195

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN-- 154
                 +++    +   ++ +    +  +    AFE  +  L+    +     + V    
Sbjct: 196 AEAIADVQSADATVQQAQAQVQQAQSLQNETVAAFEQAKANLVQAKARALQAQAGVDQAK 255

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
            G+S    S      ++          +N +S     +   +K  T  K   E    S  
Sbjct: 256 AGVSVAQASAAQARAQLEQAQREVERSQNLASEGVISVQDLEKRRTEAKTAQEDLKKSAQ 315

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++NQ    V  +  ++     + +N    ++    +      N       ++  NQ +  
Sbjct: 316 EINQAIEEVKVAEAQIINAQADIRNAEAGVSSARAKFETAGTNIGS-AQANVGNNQASVR 374

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++  L+   EQ  + +P +G I   +     +    SQ L  I+       ++ KV
Sbjct: 375 SSEARVQQLQTQLEQTLVRAPESGIIAE-RIVRVGDVTSASQKLYSII-RDGRLELQLKV 432

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
              Q+  +K G    +             +  + +I P I   +          V + + 
Sbjct: 433 PETQLPQIKIGTEVKL-ISDSDSRI--SLRGNVREIAPNIETGNRQAT------VKINLP 483

Query: 395 DLAFSDNNIELRNGF 409
            +     ++ LR G 
Sbjct: 484 RVTDIRESL-LRPGM 497


>gi|83816716|ref|YP_445532.1| HlyD family secretion protein [Salinibacter ruber DSM 13855]
 gi|83758110|gb|ABC46223.1| HlyD family secretion protein [Salinibacter ruber DSM 13855]
          Length = 401

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 57/411 (13%), Positives = 124/411 (30%), Gaps = 73/411 (17%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIK 68
             PA  + + ++S + ++ L      +P   +VS SGE+     E     ++S  S  + 
Sbjct: 17  QSPAITRSILVVSALFLVVLGVALAFVPWRQTVSGSGEVTAYAPEARPRTVESRISARVA 76

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
            + V  G ++ +G  +   ED+ ++ L D     +   R                     
Sbjct: 77  DWHVVEGDEVAKGDTVAVLEDLGSSYLDDQFADRVAAQRT-------------------- 116

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                       ++ +   ++    ++      R   + K S  
Sbjct: 117 --------------------------NTLNGLRLEVERARQKLAQARQKRRSADEKVSNA 150

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +S+ +  L  +++L +    S  DL        K+    R +       L       
Sbjct: 151 TLGVSTARTRLARIEDLQDDGISSVRDLETARLKFQKA----RTDSVAAAADLAAARRAV 206

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           + A L      +++        R   +   + +          + +PI+GT+        
Sbjct: 207 ESARLNVERKEQKLEAKQAALSRKVGNARERAS-------NAIVRAPISGTVSSINRVGP 259

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY--------ADIRE 360
               ++   L  + P +        V+      ++ G    ++F  +         D   
Sbjct: 260 GQIVKKGTTLATVAPKTDDRAAELFVSSIGASLIEPGRQVQLQFSGFPALQFSGLPDAST 319

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
             F   +  IDP+      +   +    V+   +D     +   LR G PA
Sbjct: 320 GTFTGTVRFIDPV-----GDGSGRFRMLVVPDTSDTTSWPSPEYLRQGAPA 365


>gi|126657280|ref|ZP_01728446.1| ABC-transporter DevB-like protein [Cyanothece sp. CCY0110]
 gi|126621551|gb|EAZ92262.1| ABC-transporter DevB-like protein [Cyanothece sp. CCY0110]
          Length = 438

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/337 (13%), Positives = 127/337 (37%), Gaps = 18/337 (5%)

Query: 42  ISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIETT-DLID 97
            ++S+ G +     V+ +  P       I++  V+ G ++  G  L   ++I++      
Sbjct: 61  ETISALGRLEPLGEVIHLAPPPTQGGAKIEQLLVQEGDRVKIGQTLAILDNIDSKKAAFK 120

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  +K  + +++  K+       + +  +   +  E +L   L    +T ++     +
Sbjct: 121 AAQEEVKVAQANLEIVKAGAK--QGEIEAQKATIQQLEAELKGELTTNQATIAQ-LEMEL 177

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
               R     + R+++      D + +    + L  +     + ++    +   +Q  L 
Sbjct: 178 DGEKRQQTATIERLKA---ELKDAQREYQRYKNLAGNGVISQSELEQRELELEQAQESLK 234

Query: 218 QQERIVYKSTLELRENIHEQKNM----LRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + +  + K+   L+E I  + +     +  +N+    A        +    D+++ Q   
Sbjct: 235 EGQERLNKTINTLQEQIAAESSQSNKEINSLNQQIIAAKANLNRIAEIRPVDVQKAQAEL 294

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
              M++L   +   +   I SP+ G ++   ++        +  ++++    ++  + A+
Sbjct: 295 DRAMAQLEEKQTDLDLAYIKSPLDGQVLKIHTY-PGEKVDDNNGILELGKTEQMMVV-AE 352

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           V   +I  V+ G  A ++     +      +  + KI
Sbjct: 353 VYESEINQVRIGQKAIIKSD--NNSFVGTLEGTVNKI 387


>gi|328676881|gb|AEB27751.1| Membrane-fusion protein [Francisella cf. novicida Fx1]
          Length = 160

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)

Query: 12  NHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
             P  L R  L  +I +I   + W+    I+I  +  G+I+   +V  I+S   G + K 
Sbjct: 60  KPPHPLLRTILYCLIFLIVFTVVWAYFCKIDIITAGQGKIIPAGDVKTIQSSEKGTVIKL 119

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            V++G  +  G  L+  E   T   I+  K  I+
Sbjct: 120 NVDSGQIVKAGDILVVLESEYTESDINKLKEDIE 153


>gi|168485648|ref|ZP_02710156.1| BlpC ABC transporter [Streptococcus pneumoniae CDC1087-00]
 gi|183571177|gb|EDT91705.1| BlpC ABC transporter [Streptococcus pneumoniae CDC1087-00]
          Length = 453

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 63/439 (14%), Positives = 147/439 (33%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEIAPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +          +  ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALETQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNR 178
              E        +  +Q  D       T ++V N     +S   +++ ++T+++      
Sbjct: 132 SEDEFGYHNTFMNFTKQSHDIELGISKTNTEVSNQANLTNSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +     +++ + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIVNKRARLPTGNPHQSILNRYLIASQEQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P  G +  N  F   N       + +I P    ++   I   V+   +  + KG 
Sbjct: 312 NTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPIITDTREVLITYYVSSDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGNHGT-TIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|282901204|ref|ZP_06309133.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
 gi|281193904|gb|EFA68872.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
          Length = 399

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 51/345 (14%), Positives = 128/345 (37%), Gaps = 48/345 (13%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPF---SGI-IKKFQVENGSQILQGTPLLTFEDIETT 93
            PI   V++ G +  +  ++ + +P     GI I K  V+ G +I QG  +   +     
Sbjct: 55  SPIITGVAALGRLEPQGEIIRLSAPNSLGGGIRIAKLLVKKGDKIRQGQLIAFLD----- 109

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
               +   +++  +  ++  K+ L+                         K  +   +  
Sbjct: 110 -SYSINLAALEKAKRQVEVAKANLE-------------------------KVEAGAKQGD 143

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
            Y   ++   L+ +L    S        +   + L+  L++ Q++    ++L+E  A+S 
Sbjct: 144 IYAQKAIIARLQAELRGETSAQ------KAIIARLQVELNNAQRENQRYEDLYENGAISA 197

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           ++   +         ++ E         + + +  +EA     + ++    DL+  +   
Sbjct: 198 SNAESKRLRRDTLQQQINEAKAALNRTQQTLQKQLNEAQARLNSIVEIRPTDLQLAKADL 257

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A   + +   +   +   I SPI G +   +  +       SQ + ++   ++  Y+ A+
Sbjct: 258 ASAKASVIQAQAELDLTIIRSPIDGQV--LKINAWPGEIISSQGIAELG-RTQQMYVVAE 314

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           V    ++ VK G +  +    ++     K +  +  I   ++QQ+
Sbjct: 315 VYETDVKKVKLGQSVDITADAFS----GKIQGTVTDIGLQVNQQN 355


>gi|225860546|ref|YP_002742055.1| BlpC ABC transporter [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229922|ref|ZP_06963603.1| BlpC ABC transporter [Streptococcus pneumoniae str. Canada MDR_19F]
 gi|298254857|ref|ZP_06978443.1| BlpC ABC transporter [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502326|ref|YP_003724266.1| BlpC ABC superfamily transporter [Streptococcus pneumoniae
           TCH8431/19A]
 gi|225727823|gb|ACO23674.1| BlpC ABC transporter [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237921|gb|ADI69052.1| BlpC ABC superfamily ATP binding cassette transporter
           [Streptococcus pneumoniae TCH8431/19A]
 gi|327390274|gb|EGE88615.1| bacteriocin secretion accessory family protein [Streptococcus
           pneumoniae GA04375]
          Length = 453

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 62/439 (14%), Positives = 146/439 (33%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEITPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +          +  ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALETQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNR 178
              E        +  +Q  D       T ++V N     +S   +++ ++T+++      
Sbjct: 132 SEDEFGYHNTFMNFTKQSHDIELGISKTNTEVSNQANLTNSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +     +++ + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDTIVNKRARLPTGNPHQSILNRYLIASQEQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +    
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLGN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P  G +  N  F   N       + +I P    ++   I   V+   +  + KG 
Sbjct: 312 NTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGNHGT-TIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|183599219|ref|ZP_02960712.1| hypothetical protein PROSTU_02678 [Providencia stuartii ATCC 25827]
 gi|188021449|gb|EDU59489.1| hypothetical protein PROSTU_02678 [Providencia stuartii ATCC 25827]
          Length = 424

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 60/403 (14%), Positives = 140/403 (34%), Gaps = 61/403 (15%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           GE++++   V I      I+ K  V  G  + +G  +   +  + T   +L   ++ ++ 
Sbjct: 60  GEVISKKQPVNISVTQQSIVIKKFVNVGDYVKKGQKIYQLDISKVTKNGNLGVNTVNSIN 119

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++             D+++K  +S+E    +   + +                     
Sbjct: 120 YQVE----------KIDDIIKKTIDSKEMTKNNIETQIN--------------------- 148

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           L +  +I    ++L    SL  A LS     L   +   +K  +++  L  Q  I Y+  
Sbjct: 149 LYKKSNIQNKDMELAILKSLNEAKLS-----LDNYRIYLKKGMINKEQLTNQSNIFYQQQ 203

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           +  +   ++       I+ L ++  ++ A++       + + +    D   +L+      
Sbjct: 204 VAYQGIRNQINQDSLMISNLENDLKIKMADF----DTQIYKYESQKIDLQKQLSEA-NAN 258

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK---LTYIRAKVTPKQIQHVKK 344
               ILSPI G I               + ++KI+   +      +   V    + ++  
Sbjct: 259 NTLFILSPIDGFIDTLNVN-EGQLIDPGENIIKIIRSDESGYQLIL--WVPSSSVPYLNV 315

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN------------NLQTQEYYEVILK 392
                +R+  +   +  +F   I  I  +   ++             +     +Y+VI++
Sbjct: 316 KDKIKIRYDSFPYQKFGQFSGSISMISKLPISKNEMLLYSSSPVNLQSSFNTSFYKVIVE 375

Query: 393 ITDLAFSDNNIELR--NGFPAEVLFTAKNTTLAQEIIHPITDN 433
           + + +    N  L   NG  AE +   +   L Q +     D+
Sbjct: 376 LDNQSIKYKNKTLYLSNGLKAEAILFLEKRPLYQWVTSSYYDS 418


>gi|225850359|ref|YP_002730593.1| efflux system, membrane fusion protein [Persephonella marina EX-H1]
 gi|225645454|gb|ACO03640.1| efflux system, membrane fusion protein [Persephonella marina EX-H1]
          Length = 385

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 127/363 (34%), Gaps = 54/363 (14%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K+  VE G ++ +G  +      E    ++  + +IK     I+ ++  L+ L    
Sbjct: 57  GRVKEIFVEEGKEVKKGEIIAVLSGKEYEAELEAVRYNIKAKEKEIEAKEIELEIL---- 112

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                     K     +     SLK+ L+ ++       +LE +
Sbjct: 113 -------------------------KKTLPENVKKARSSLKINLSLLK-------ELEKQ 140

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              +++++   +KD    KNL+EK  + ++ L + +  +      L+  + ++K +++ I
Sbjct: 141 IETVKSIVEKDEKDYERFKNLYEKKLIPEDRLEKIKLKLESDRNRLKGFLEKKKQIIQQI 200

Query: 245 NELYDEANLEFANYLK-EISRD-LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
           +          A   K EI    +   +       S+   L    ++  I SP+ G IV 
Sbjct: 201 DAAKSSLKQAEATVKKIEILEKGISALKIGINALKSREKQLMVILDELKIRSPVDGYIVD 260

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +         +   +  ++   +  Y++  V       +K G  A +    Y D     
Sbjct: 261 -KIADKGEVLGEGMVVATVI-DPETLYLKIFVDTINNGKIKIGDRALIFLDAYPDR---P 315

Query: 363 FKAIIEKIDPIISQQDNNL-----QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT- 416
            +A + +I          +     + Q  Y V +K   +        L+ G PA  + + 
Sbjct: 316 IEARVVRISQRAEFTPKEVAVKEDRIQRVYAVHIKPLKVEPV-----LKLGLPAVGVISI 370

Query: 417 AKN 419
              
Sbjct: 371 TGK 373


>gi|116495831|ref|YP_807565.1| lactococcin A ABC transporter permease protein [Lactobacillus casei
           ATCC 334]
 gi|116105981|gb|ABJ71123.1| lactococcin A ABC transporter permease protein [Lactobacillus casei
           ATCC 334]
          Length = 459

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 59/431 (13%), Positives = 146/431 (33%), Gaps = 54/431 (12%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           + ++T + + P++ +V+  G      N +               + G  + +G  LL + 
Sbjct: 46  VTVLTAAEIAPVKTAVTVQGT---AANRIVTNHM----------KEGKHVKRGDTLLVYH 92

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D+     + + +  +  L+      K+ L+ LN      +  F S ++       + + +
Sbjct: 93  DVAHPAQLKVLEQQLATLKDQ----KAQLEVLNQSIAANKNLFASPDKFGYQQQVRDYLS 148

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             +V+     +++ +  +   + + I          S      +   Q  +   + L + 
Sbjct: 149 QRRVYELESEALHATQGVADGKSKEIDQLLQTSMQASEAKMTAIREAQTAIRTDRPLSDN 208

Query: 209 NAVS-------------------------QNDLNQQERIVYKSTLELR-ENIHEQKNMLR 242
           +A +                         Q+ L        ++   LR + I++++  L 
Sbjct: 209 HAYNYLYLQYKAEAKNADAANLNSLKGQYQSQLQNLLTTEKETLASLRTQRINQKQADLS 268

Query: 243 HINELYDEANLEFAN--YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                 +EA L        + ++ +  + Q+   +  +KL  L+   +   + +  +G +
Sbjct: 269 AQQTGQNEAKLASLQSHMQQTMTAEQVKVQQGTQEGEAKLAALKDESKNYQVKASASGVL 328

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
               S S + Y      L +I+P     K   ++  V+P +I  +K+G +  +R      
Sbjct: 329 HLEASLSGNKYIPAGTVLAQILPDLATQKEAELKLAVSPAEIMSLKRGQSVRLRIAE--- 385

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                   +  +ID I      N +   Y++V  ++         +    G   +     
Sbjct: 386 -NVPSPMTLTGRIDAIDVAPTVNAKVGNYFKVQARVPLSERQRQTLHY--GIAGQAAVIT 442

Query: 418 KNTTLAQEIIH 428
              T  Q  + 
Sbjct: 443 GTKTYWQYFVD 453


>gi|307262556|ref|ZP_07544195.1| hypothetical protein appser12_20900 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306867754|gb|EFM99591.1| hypothetical protein appser12_20900 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 318

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 100/304 (32%), Gaps = 18/304 (5%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +  +        +V     ++   +L     ++        D +   + +      + + 
Sbjct: 6   ISAIKTQIQKLDRVIILVKANQTETLANLEKQIAKNRKIYSDTQKYFAEVTKSTEDYYQT 65

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L   + L +K   + +++   +R  Y     LR ++ E    L            E  + 
Sbjct: 66  LKKYEELMKKGYSANDEV-ALQRSRYFDQKSLRNSLQE---KLIQQESAIISLENEVESR 121

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             +    + + +    D   +L   E +  +  + +P+ G +      +     ++   L
Sbjct: 122 KTDFQNQIIRYELQQNDLEIRLMEFE-SVSELIVNAPLDGLVESVSV-TVGQVIREGDTL 179

Query: 319 MKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            +++P +     +   V    I  +       +R+  +   +  +F+  I+ I  I +  
Sbjct: 180 AQMIPANKGEYQLVMWVPNSAISFINPEDKLNIRYEAFPFEKFGQFEGSIKHISTIPASL 239

Query: 378 DN---------NLQTQEYYEVILKITDLAFSDNNIEL--RNGFPAEVLFTAKNTTLAQEI 426
                             Y++++ I D     NN  L   +G  AE     +N  L + I
Sbjct: 240 QELAFYKNIPAADPNNPLYKIVVAIADQKVEYNNTSLAFLSGMKAEATLFLENRKLYEWI 299

Query: 427 IHPI 430
           + P+
Sbjct: 300 LFPL 303


>gi|149178580|ref|ZP_01857167.1| Secretion protein HlyD [Planctomyces maris DSM 8797]
 gi|148842598|gb|EDL56974.1| Secretion protein HlyD [Planctomyces maris DSM 8797]
          Length = 368

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 55/364 (15%), Positives = 118/364 (32%), Gaps = 37/364 (10%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S   G +K+  +E G  + QG  L+  E                 L    +      +  
Sbjct: 37  SRVGGRVKQVLIEEGQSVSQGDLLIELEP-------------YDLLERRAEAIAGLAEVK 83

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               +++        ++    + +  +  + + N        S   +L    + Y     
Sbjct: 84  AQHAELVAGFRTEEIDEAAAKVDQLKARLTLLINGPRQQEIDSAVAELHLADAEYRLAKA 143

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            + +   L    S+   +L       +  A S+ ++ Q+   + K     +E I E +  
Sbjct: 144 KQMRVETLFGQKSASTDELDTANTELQV-AASRKEVKQKSLDLLK-EGTRKEEIDEARAQ 201

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           L+                      D+EQ   +     + L  +E   ++  I++P+ GTI
Sbjct: 202 LKQAEAALQLLRNGSRK------EDIEQAAASVRKAEAFLQTIEDQIKELKIVAPLDGTI 255

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                    +    + P++ I+      ++R  V    +  ++      V    Y D   
Sbjct: 256 EAVTL-QPGDLVGSNVPVVSIL-DWNALWVRCYVPENHLD-IQVDQEVEVTIDSYPD--- 309

Query: 361 KKFKAIIEKIDPIIS-----QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           K FK  +  +           Q    ++++ + + ++ITD         LR G  A+V  
Sbjct: 310 KTFKGRVSFVSRQAEFVPRNVQTPEERSKQVFRIKVRITDKDKL-----LRPGMAADVWL 364

Query: 416 TAKN 419
             K+
Sbjct: 365 HGKD 368


>gi|283780528|ref|YP_003371283.1| secretion protein HlyD [Pirellula staleyi DSM 6068]
 gi|283438981|gb|ADB17423.1| secretion protein HlyD [Pirellula staleyi DSM 6068]
          Length = 459

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 128/389 (32%), Gaps = 48/389 (12%)

Query: 6   WKNLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKS 61
           W++     P+   R+    + + +  +I   + LP + +   +G ++     +    I++
Sbjct: 26  WQSQMLVRPSIGVRVLAFGLFLALFVMIVGMLYLPWQQTSRGAGRVVAYDPTERPQTIEA 85

Query: 62  PFSGIIKK----FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           P  G + K         G+ + +G  +L   D +              L   ++  K  L
Sbjct: 86  PIYGRVAKWGEGIY--EGASVTKGQLILEIADNDPE--------RALRLEQQVEATKQKL 135

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            F  +K      ++ S+ E+          + +++       +  S         S +  
Sbjct: 136 AFATDKVQ----SYFSQIEEYRASRTLIEESYAQLIAVAEQKIAASKSDLAAAKASEWQL 191

Query: 178 RLDLENKSSLLRALLSSH---QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            +D + + +L +  +      Q+     +    K   S++ +   ER       E +  +
Sbjct: 192 EIDFQRQDTLAKEGIVGGIKGQEAKAKYEQAVAKRQASESYVEAAERERESKLAEGKAKV 251

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E    ++     +  A  E A   KE    L + Q   A    +           T+++
Sbjct: 252 REAVTKVQEAQAKHQAAQGEEALARKE----LAEIQGKLAQFGQR-----------TVVA 296

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT----- 349
           P  G ++      ++   ++  PL  IVP +    +   V    I  ++ G         
Sbjct: 297 PRDGILLRIYVADNTQMLKEGDPLFMIVPETTEQAVELWVNGNDIPLIELGREVRLQFEG 356

Query: 350 ---VRFPHYADIREKKFKAIIEKIDPIIS 375
              V+F  +  +    F   +  ID    
Sbjct: 357 WPAVQFAGWPSVAVGTFSGEVVAIDATDD 385


>gi|239503156|ref|ZP_04662466.1| Multidrug resistance protein A [Acinetobacter baumannii AB900]
          Length = 383

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 56/371 (15%), Positives = 113/371 (30%), Gaps = 65/371 (17%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           +I S  SG + +  V++   + +G  L+  +D +    +   +  +   +       +  
Sbjct: 68  QITSMVSGQVAQVLVKDTQTVHRGDVLVRIDDRDAKIALAQAEAELAKAKRQYKQTAANS 127

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             LN++  V      S                                            
Sbjct: 128 SSLNSQVVVRADEINS-------------------------------------------- 143

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIH 235
               + +    +A       +L     L    AVS+ +L + +  V   K+ LEL +   
Sbjct: 144 ---AKAQVDQAQADYDKAALELNRRAQLAASGAVSKEELTKAQSAVETAKAGLELAKAGL 200

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            Q    R   E    AN      + E S              + +   +   E+  I +P
Sbjct: 201 AQATSSRKAAESTLAANEALIQGVSETST------PDVQVAQAHVEQAQLDLERTVIRAP 254

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G I   ++            +M IVP +   Y+ A     Q++ V+ G   T+    Y
Sbjct: 255 VDGVITR-RNIQVGQRVAPGTSMMMIVPLND-LYVDANFKESQLKKVRPGQPVTLTSDLY 312

Query: 356 AD-----IREKKFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRN 407
            D      +   F         +I  Q+      +  +   V + +     +++ + +  
Sbjct: 313 GDDVEYHGKVVGFSGGTGSAFALIPAQNATGNWIKVVQRLPVRIALDPKELAEHPLRVGL 372

Query: 408 GFPAEVLFTAK 418
              A+V  +AK
Sbjct: 373 SMEAKVDLSAK 383


>gi|307823315|ref|ZP_07653544.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
 gi|307735300|gb|EFO06148.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
          Length = 391

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 133/374 (35%), Gaps = 29/374 (7%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   +VV++ S  SGII+     +   +     L+  +       +D  +  +      +
Sbjct: 41  IVRCDVVDVTSQVSGIIQSVHFHDDQLVNVDDDLINIDPDLYRARLDRAEARLN--IAEL 98

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
               +  D L ++ +  +  FE  ++ L   L       S++     SS    + +KL  
Sbjct: 99  SYSAALKDELLSEINA-KSDFERSKDSLDAALANLEVIKSQMDEAKASSRSAKVDLKLA- 156

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             + Y   L +  K    +A   + + ++   K L    A SQ ++  QE         +
Sbjct: 157 -EANYQRVLSIFQKGMTSKASFDNAESNMDSKKALL---AASQANVEAQENQFGAEKARV 212

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            E        +R  + +Y ++     +   + + ++       A     L  L+    + 
Sbjct: 213 AE--------IRKRSNVYGQSEGSLIS-KAQANTEISSGNVKVARAERDLAALDY--SRT 261

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +  +G I   +  +  ++ + +QP+  IV  ++  +I A     Q+  +K G     
Sbjct: 262 KIKAFRSGIITNRKV-ALGHFVEANQPIGSIVTCTEKAWIEANYKETQVGRMKPGQPVKF 320

Query: 351 RFPHYADIREKKFKAIIEKID----PIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIE 404
               Y D+   +F   +E I      I S       T  + +V   + +      + N++
Sbjct: 321 TVDAYPDV---EFLGEVESISGGSGAIFSLLPPENATGNFTKVVQRIPVRIKINQEQNVK 377

Query: 405 LRNGFPAEVLFTAK 418
           +R G         +
Sbjct: 378 MRVGMSVVATVITE 391


>gi|160891101|ref|ZP_02072104.1| hypothetical protein BACUNI_03548 [Bacteroides uniformis ATCC 8492]
 gi|156859322|gb|EDO52753.1| hypothetical protein BACUNI_03548 [Bacteroides uniformis ATCC 8492]
          Length = 436

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 55/426 (12%), Positives = 139/426 (32%), Gaps = 40/426 (9%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
               L  I+ ++ +  W    P   ++++   +  E+    + S  +G +    V+NGS 
Sbjct: 32  GITVLAVILLMVLVGCWIFRYP--DTLAAEVTLATEEPPAFVLSHATGKLDTLYVKNGSS 89

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +   T L    +   ++ + L K  +K                +  +    + F  R  Q
Sbjct: 90  VEADTDLGVIGNAACSEDVRLLKKWMKAWETQ-----------DYDWQKGVELFIGRRWQ 138

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKL-TRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           L +    + +  + +  Y           KL  + + +   R  L     L         
Sbjct: 139 LGELQSAFAAFITSLTEYARFMELDYYARKLCFQEKQLGGQRSYL----RLAEREYELID 194

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           KD+ + ++++ ++++             +S     +++  ++ +   + +   +      
Sbjct: 195 KDIKLAESMYIRDSILYVRKAMIAAEFEESGSRYLQSLRSKEEVRMSLLQAEMQLVQHEE 254

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT----ILSPIAGTIVYNQSFSSSNYA 312
           N L    +  ++ Q    D  + +  L            + SP+ G + +   +S +   
Sbjct: 255 NMLDIRKQAYDEEQSRRTDLKNAIGQLAAQLSAWEHSYLLKSPVRGKVTFMTVWSRNQNV 314

Query: 313 QQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +  + +  I P      + +A +  +    V  G    +R  +Y D      K  +  I 
Sbjct: 315 KAGETVFTIQPSDSSRVLGKALLPLQGSGKVHVGQRVHIRLNNYPDQEFGYVKGQVASIS 374

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA------EVLFTAKNTTLAQE 425
           P           +  Y V + + D   ++   +L    P              +  + + 
Sbjct: 375 P-------APTEEGMYIVEITLPDGMQTNYGKQL----PVSRELKGTADIILADKNVLER 423

Query: 426 IIHPIT 431
           ++ P+ 
Sbjct: 424 LLAPLR 429


>gi|190151078|ref|YP_001969603.1| hypothetical protein APP7_1809 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|189916209|gb|ACE62461.1| conserved hypothetical protein [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
          Length = 330

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 100/304 (32%), Gaps = 18/304 (5%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +  +        +V     ++   +L     ++        D +   + +      + + 
Sbjct: 18  ISAIKTQIQKLDRVIILVKANQTETLANLEKQIAKNRKIYSDTQKYFAEVTKSTEDYYQT 77

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L   + L +K   + +++   +R  Y     LR ++ E    L            E  + 
Sbjct: 78  LKKYEELMKKGYSANDEV-ALQRSRYFDQKSLRNSLQE---KLIQQESAIISLENEVESR 133

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             +    + + +    D   +L   E +  +  + +P+ G +      +     ++   L
Sbjct: 134 KTDFQNQIIRYELQQNDLEIRLMEFE-SVSELIVNAPLDGLVESVGV-TVGQVIREGDTL 191

Query: 319 MKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            +++P +     +   V    I  +       +R+  +   +  +F+  I+ I  I +  
Sbjct: 192 AQMIPANKGEYQLVMWVPNSAISFINPEDKLNIRYEAFPFEKFGQFEGSIKHISTIPASL 251

Query: 378 DN---------NLQTQEYYEVILKITDLAFSDNNIEL--RNGFPAEVLFTAKNTTLAQEI 426
                             Y++++ I D     NN  L   +G  AE     +N  L + I
Sbjct: 252 QELAFYKNIPAADPNNPLYKIVVAIADQKVEYNNTSLAFLSGMKAEATLFLENRKLYEWI 311

Query: 427 IHPI 430
           + P+
Sbjct: 312 LFPL 315


>gi|332296371|ref|YP_004438294.1| secretion protein HlyD family protein [Thermodesulfobium narugense
           DSM 14796]
 gi|332179474|gb|AEE15163.1| secretion protein HlyD family protein [Thermodesulfobium narugense
           DSM 14796]
          Length = 329

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 62/407 (15%), Positives = 138/407 (33%), Gaps = 95/407 (23%)

Query: 18  KRMTLLSIIGIIGLITWSILL---PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           K + +  +I I  ++ +  L+   P    +  SG I  +   V  +    G +   +V+ 
Sbjct: 5   KAIVIFLLILIAAILVYWFLIRKEPPNNVIEVSGNIEADQYNVSFQ--IYGTLSSLKVQE 62

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++ +G  L T              +S K+L   +                        
Sbjct: 63  GDKVKKGELLAT--------------LSRKDLEDSLQA---------------------- 86

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                     ++   +K       S YR+  +K+             E       A    
Sbjct: 87  --------AIHNMNKAKALYDQYLSGYRTQDIKMA------------EADRDAKLAQFEK 126

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q D    + L++++A+  +  +  + I   S   L+ +  + K +     +        
Sbjct: 127 AQSDYIRYEKLYKEDAIPASSFDDIKSIYLSSKEALKASEQKLKELQSGYRQ-------- 178

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                     ++E  +  + + ++++   +       I SPI G +V+++      +   
Sbjct: 179 ---------EEVESAKEAYKESIAQVEQAKTILGYTKIYSPIDG-VVFSKDSEVGEFVSS 228

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
             P++ +   +   Y++  V+ K I  VK     T++   + D   K F   +E I    
Sbjct: 229 GTPVLTLYDLNST-YVKVYVSEKDIGFVKLNAPCTIKVDSFPD---KNFSGYVEAIS-DK 283

Query: 375 SQ------QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           ++      Q  + + +  + V +KI++         L+ G PA+V  
Sbjct: 284 AEYTPKFIQTKDERVKYMFWVKVKISNPEGI-----LKPGMPADVYI 325


>gi|298386006|ref|ZP_06995563.1| hemolysin secretion protein [Bacteroides sp. 1_1_14]
 gi|298261234|gb|EFI04101.1| hemolysin secretion protein [Bacteroides sp. 1_1_14]
          Length = 441

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 99/253 (39%), Gaps = 9/253 (3%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-LF 206
             S+ +    S VY+++   L +   I    ++  NK  LL+    S +K+     + L+
Sbjct: 150 AHSQYYRTLHSDVYKTMCNSLQQQNEINSEIIENLNKELLLKGKKLSIEKERLTKDSILY 209

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              A+S+ D  +Q+   Y    +L+    E  +          +   +   YL +    L
Sbjct: 210 LAKAISEQDFQRQQSTFY----DLQAAYKELHSSRLSYTAQIKKNEQQIQQYLLQEQETL 265

Query: 267 EQNQRTFADEMSKLTILEKTREQKTI-LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           ++ +   +   S+LT      +++ + +SPI G + Y   +  + + Q  Q L  I+P  
Sbjct: 266 DKLREELSVSKSQLTNTIHAWKKQYLQISPINGQMEYLGFWRENYFVQNGQELFSILPDQ 325

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ- 384
                   V    I  VK G TA V+  +Y  +     K  +  I  + ++      TQ 
Sbjct: 326 NEIVGEMIVPSYGIGKVKIGQTANVKVNNYPYMEYGLIKGKVSSISRLSNKVQMPSATQV 385

Query: 385 --EYYEVILKITD 395
               Y +I+   D
Sbjct: 386 ESNVYRIIITFPD 398


>gi|226952387|ref|ZP_03822851.1| multidrug resistance secretion protein [Acinetobacter sp. ATCC
           27244]
 gi|226836839|gb|EEH69222.1| multidrug resistance secretion protein [Acinetobacter sp. ATCC
           27244]
          Length = 382

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/418 (13%), Positives = 124/418 (29%), Gaps = 68/418 (16%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            +K      L    L+ I+  I    W++         S+          ++ S  SG +
Sbjct: 20  AMKAKRKKFLGFFMLILILAAILYAIWALFFN---HSVSTDNAYVGAETAQVTSMVSGQV 76

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V++  Q+ QG  L+  ++ +        K+ +   +  +   +            L
Sbjct: 77  AEVLVKDTQQVKQGDVLVRIDERDA-------KIQLAQAQAELAKAQRQYKQSQANSRSL 129

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                 R +++                                           + + + 
Sbjct: 130 NSQVVVRNDEI----------------------------------------SSAQAQVTK 149

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHIN 245
            +A       +L     L    A+S+ +L++ +  V   K++LEL +    Q    R   
Sbjct: 150 AQADYDRASLELKRRNELAATGAISKEELSKAQSAVSTAKASLELAQAGLAQATSSRKAA 209

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E    AN      + E S              + +   +   E+  I +P+ G I   ++
Sbjct: 210 ESTFAANEALIQGVNEAST------PDVLVAKAHVDQAQLDLERTVIRAPVDGVIAR-RN 262

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA-----DIRE 360
                       +M +VP S   Y+ A     Q+  VK G   ++    Y          
Sbjct: 263 IQIGQRVAPGTVMMSVVPVSD-LYVDANFKESQLAKVKAGQKVSLTSDLYGGDVIYHGTV 321

Query: 361 KKFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + F         +I  Q+      +  +   V + +      ++ + +     A++  
Sbjct: 322 QGFSGGTGAAFALIPAQNATGNWIKVVQRLPVRISLDPKELVEHPLRVGLSMQADIDL 379


>gi|220907407|ref|YP_002482718.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 7425]
 gi|219864018|gb|ACL44357.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           7425]
          Length = 580

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/392 (14%), Positives = 118/392 (30%), Gaps = 73/392 (18%)

Query: 39  PIEISVSSSGEILNEDNVV-EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            + + + ++GEI    +   E+ +P  G + +  V  G  +  G P+      E      
Sbjct: 93  RLALGIKTTGEIETLPDRQAEVTTPVGGTVIRLLVRPGEAVTVGQPVAIMTSSE------ 146

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                +  LR                      A + + E +               NY  
Sbjct: 147 -----LAELRT--------------------TALDRQAEAIAAIQQAQADLQQAQENYRQ 181

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                +  ++                     R  LS  Q+     K L  + A+ +    
Sbjct: 182 QQKIATTDIQQA-------------------RTQLSFAQERYDKDKELMVQGAIPRRQFL 222

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E  +  +   L +     +           +AN++ A     +S +  Q +      +
Sbjct: 223 ESETQLAAARAALAKASSRLQVTEAAAQLKRAQANVDVARSRLALSGETYQTR------L 276

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
            +L          TI +PI+G +   ++ +  +     + ++ IV +S    + A +  K
Sbjct: 277 RQLGTTPNADGTITIKAPISGIVADREATTGESGEDAGKKILTIV-NSSKVQVSANIYEK 335

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  ++ G    V+     D     F   I  I  ++  Q             +      
Sbjct: 336 DLNQIQIGQPVRVKVNGLPDR---SFAGRISVIGAVVEGQS-----------RVVPVRAE 381

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
            S+ +  L+ G  AE+     N T    +  P
Sbjct: 382 LSNPDGVLKPGMFAELEILT-NRTPTTVLTIP 412


>gi|149279812|ref|ZP_01885939.1| putative HlyD-family transporter [Pedobacter sp. BAL39]
 gi|149229402|gb|EDM34794.1| putative HlyD-family transporter [Pedobacter sp. BAL39]
          Length = 435

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/425 (12%), Positives = 139/425 (32%), Gaps = 25/425 (5%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++  + +  + I+ L   + L+     V +   I +++   ++++  +  I+K  V + +
Sbjct: 30  IRWGSTVICLLIVMLFVMACLIRYPEFVDAPIVISSQNPPEKLEATINSKIEKIFVSDQA 89

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +   +L  E        +     +  L+  +D      +     + +         E
Sbjct: 90  AVKKDQVILLLES-------NADYKDVMQLKAMVD---DLTEDKLLHFPLEAATRFKLGE 139

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              D+     +   ++    +        +    +R      + ++ + +L    L   +
Sbjct: 140 VQDDYTAFAKAIQDELLFSTLKPYDAEGVLAGRNIRDYQHRIVIMKQQYALEGNKLELTE 199

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +    + L  K  +S  +L  ++  +    LE R+N    +  L  + E       +  
Sbjct: 200 TNYKRSELLKTKGVISTLELENEKMKL----LEQRKNYKNIQLSLAQLEESILTFKNQQT 255

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVYNQSFSSSNYAQQS 315
           N     S+D           + KL       E+   I S I G + Y +  +++ + +  
Sbjct: 256 NVTINKSKDRTNFSTGSLLMLEKLRKSIHQWERAYLIKSSINGKVSYLKFLAANQFVKAG 315

Query: 316 QPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
             L+ I+P  +   + +  +  +    +K      ++  +Y        K +++ +    
Sbjct: 316 TVLLSILPDDRSRIVGQMHIAAQNQGKIKPDQNVLIKLDNYRYQEFGMAKGVVKSLSFTP 375

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
            +       + Y EV L+          I        +     +  +LA      I +  
Sbjct: 376 DED-----GKYYLEVTLQAGLKTSYGKQISFDKELTGQASIVTEKMSLAAR----IMNQL 426

Query: 435 PKIFE 439
              F 
Sbjct: 427 RSAFR 431


>gi|182418492|ref|ZP_02949785.1| putative HylD family protein [Clostridium butyricum 5521]
 gi|237667347|ref|ZP_04527331.1| efflux transporter, RND family, MFP subunit [Clostridium butyricum
           E4 str. BoNT E BL5262]
 gi|182377655|gb|EDT75200.1| putative HylD family protein [Clostridium butyricum 5521]
 gi|237655695|gb|EEP53251.1| efflux transporter, RND family, MFP subunit [Clostridium butyricum
           E4 str. BoNT E BL5262]
          Length = 480

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/323 (15%), Positives = 107/323 (33%), Gaps = 63/323 (19%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +IK+ +VE G ++ +G  L   +       +  K+++        D EK+ ++       
Sbjct: 86  VIKEVKVEAGDKVNEGDVLCVLD-----SSVLEKEIAEATSTLEHDKEKAKIE------- 133

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                        L+   + +   S ++   I S                 +  D +   
Sbjct: 134 -------------LEGKKQAYDNASYIYENNIDS-----------------SITDSKEAL 163

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  +  L+  Q+D    K L++  AVSQ+DL+  +  + ++  +  ++    +N      
Sbjct: 164 NTAQIKLNDAQRDYDQKKTLYDNGAVSQSDLDNAKSTLDQAKSDYDKSSVSLENAKVKAK 223

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E  + A  E+ + L E + + ++           L   +   ++  I +P +GTI    +
Sbjct: 224 EAVNNAKNEYDSALIEYNNNKDEI---------SLKGKKDDLDKCVIKAPASGTITTVNA 274

Query: 306 ---FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +S       + L           I   V    +  +  G    V      D +   
Sbjct: 275 SVGNTSQGVLFTIENL------DDP-IIMVNVKEIDVNKINPGQEVEVTTDAAPDDKY-- 325

Query: 363 FKAIIEKIDPIISQQDNNLQTQE 385
            K  +  I   I   +    T  
Sbjct: 326 AKGKVLSISDTIKTSEGTFNTNS 348


>gi|119511075|ref|ZP_01630194.1| Secretion protein HlyD [Nodularia spumigena CCY9414]
 gi|119464246|gb|EAW45164.1| Secretion protein HlyD [Nodularia spumigena CCY9414]
          Length = 402

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 60/387 (15%), Positives = 133/387 (34%), Gaps = 46/387 (11%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPF---SGIIKKFQVENGSQILQGTPLLTFEDIE 91
           +   P++++V++ G +  E  V  + +P       ++K  V+ G ++  G  L   E+  
Sbjct: 56  ATPTPVKVAVTALGRLQPEGEVTNLSAPNSVNGVRVEKTLVKEGEEVKDGQILAYLEN-- 113

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                                           Y     A +   +QL     K     S 
Sbjct: 114 --------------------------------YGRATTALQQALDQLEIAKAKLAQVQSG 141

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                I++   ++    ++++     +   +   + ++A + + Q +    + L++  A+
Sbjct: 142 AKPGDITAQKAAIARLESQLKGDIAAQ---QATINRIQAEVDNAQSENNRYQQLYKDGAI 198

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S +  + +   +     +L E           + +   EA     +  +  + D+E  + 
Sbjct: 199 SASIADSKALQLKTVQQQLTEAKANLNRTQNTLQDQLKEAKARLNSISEIRTVDVELAKT 258

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                ++ +   +  +E   + SPI G ++   + +       +    +I   S++  + 
Sbjct: 259 EVNSAVTAIKQAQADQELTYLKSPINGQVLKIHAKT-GEVINSNG-FAEIGKISQMYVV- 315

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEYYEV 389
           A+V    IQ VK G  AT+    +    +     I  +ID   I S        +   EV
Sbjct: 316 AEVYQTDIQKVKVGQKATITSNAFPGKIQGTVSKIGWQIDRQSIFSLNPAADTDRRIVEV 375

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFT 416
            + I D A S     L N    +V   
Sbjct: 376 KISINDPADSQRVARLTN-LQVDVAIQ 401


>gi|88813589|ref|ZP_01128821.1| Secretion protein HlyD family [Nitrococcus mobilis Nb-231]
 gi|88789151|gb|EAR20286.1| Secretion protein HlyD family [Nitrococcus mobilis Nb-231]
          Length = 371

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/373 (11%), Positives = 106/373 (28%), Gaps = 87/373 (23%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
             N++ +++  +GII +  VE   ++ +G  L+  ++ +               R  +  
Sbjct: 34  TGNLIRVEAQATGIITQVLVEETQRVKKGDLLIRLDEHQA--------------RARLGR 79

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +  L                                                 ++ R+ 
Sbjct: 80  TRGGL-----------------------------------------------GAEVRRIA 92

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           ++++ +  +  K +  RA L   + D+   +      AVS+  L      V     E+RE
Sbjct: 93  ALFVKQRQIRQKLTAKRARLDLVRHDVVRFRQALPSGAVSEQVLENALDQVRALHAEVRE 152

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              E +++   +  +                     +         +         ++ I
Sbjct: 153 AREELQSITARVGGVSIR------------------HHPAVEAAKHRFIEAYLEYIRQRI 194

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P +G +   +     ++     PLM IVP     ++   +    ++ V+ G  A V  
Sbjct: 195 WAPASGYVAK-RKAQVGDHVHPGVPLMTIVPLDH-LWVEVNLRETDLRQVRPGQPALVNV 252

Query: 353 PHYADIRE--KKFKAIIEKIDPIISQQDNNLQTQEYY----EVILKITDLAFSDNNIELR 406
             Y          + ++     + +       T  +      V +++           +R
Sbjct: 253 DVYGKRHTYHGTVEGLVPGTGSVFALLPPENATGNFIHIVERVPIRVALSKKEILEHPVR 312

Query: 407 NGFPAEVLFTAKN 419
            G   +       
Sbjct: 313 PGLSTKTYIHVSE 325


>gi|307264442|ref|ZP_07546028.1| hypothetical protein appser13_18330 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306870258|gb|EFN02016.1| hypothetical protein appser13_18330 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 318

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 100/304 (32%), Gaps = 18/304 (5%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +  +        +V     ++   +L     ++        D +   + +      + + 
Sbjct: 6   ISAIKTQIQKLDRVIILVKANQTETLANLEKQIAKNRKIYSDTQKYFAEVTKSTEDYYQT 65

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L   + L +K   + +++   +R  Y     LR ++ E    L            E  + 
Sbjct: 66  LKKYEELMKKGYSANDEV-ALQRSRYFDQKSLRNSLQE---KLIQQESAIISLENEVESR 121

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             +    + + +    D   +L   E +  +  + +P+ G +      +     ++   L
Sbjct: 122 KTDFQNQIIRYELQQNDLEIRLMEFE-SVSELIVNAPLDGLVESVGV-TVGQVIREGDTL 179

Query: 319 MKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            +++P +     +   V    I  +       +R+  +   +  +F+  I+ I  I +  
Sbjct: 180 AQMIPANKGEYQLVMWVPNSAISFINPEDKLNIRYEAFPFEKFGQFEGSIKHISTIPASL 239

Query: 378 DN---------NLQTQEYYEVILKITDLAFSDNNIEL--RNGFPAEVLFTAKNTTLAQEI 426
                             Y++++ I D     NN  L   +G  AE     +N  L + I
Sbjct: 240 QELAFYKNIPAADPNNPLYKIVVAIADQKVEYNNTSLAFLSGMKAEATLFLENRKLYEWI 299

Query: 427 IHPI 430
           + P+
Sbjct: 300 LFPL 303


>gi|301067381|ref|YP_003789404.1| lactococcin A ABC transporter permease [Lactobacillus casei str.
           Zhang]
 gi|300439788|gb|ADK19554.1| lactococcin A ABC transporter permease protein [Lactobacillus casei
           str. Zhang]
          Length = 459

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 62/431 (14%), Positives = 147/431 (34%), Gaps = 54/431 (12%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           + ++T + + P++ +V+  G      N +               + G  + +G  LL + 
Sbjct: 46  VTVLTAAEIAPVKTAVTVQGT---AANRIVTNHM----------KEGKHVKRGDTLLVYH 92

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D+     + + +  +  L+      K+ L+ LN      +  F S ++       + + +
Sbjct: 93  DVAHPAQLKVLEQQLATLKDQ----KAQLEVLNQSIAANKNLFASPDKFGYQQQVRDYLS 148

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE- 207
             +V+     +++ +  +   + + I          S      +   Q  +   + L + 
Sbjct: 149 QRRVYELESEALHATQGVADGKSKEIDQLLQTSMQASEAKMTAIREAQTAIRTDRPLSDN 208

Query: 208 --------------KNAVS----------QNDLNQQERIVYKSTLELR-ENIHEQKNMLR 242
                         KNA +          Q+ L        ++   LR + I++++  L 
Sbjct: 209 HTYNYLYLQYKAEAKNADAANLNSLKGQYQSQLQNLLTTEKETLASLRTQRINQKQADLS 268

Query: 243 HINELYDEANLEFAN--YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                 +EA L        + ++ +  + Q+   +  +KL  L+   +   + +  +G +
Sbjct: 269 AQQTGQNEAKLASLQSHMQQTMTAEQVKVQQGTQEGEAKLAALKDESKNYQVKASASGVL 328

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPH-SKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYAD 357
               S S + Y      L +I+P  +    +  K  V+P +I  +K+G +  +R      
Sbjct: 329 HLEASLSGNKYIPAGTVLAQILPDLATQKEVELKLAVSPAEIMSLKRGQSVRLRIAE--- 385

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                   +  +ID I      N +   Y++V  ++           L  G   +     
Sbjct: 386 -NVPSPMTLTGRIDAIDVAPTVNAKVGNYFKVQARVP--LSKQQRQTLHYGIAGQAAVIT 442

Query: 418 KNTTLAQEIIH 428
              T  Q  + 
Sbjct: 443 GTKTYWQYFVD 453


>gi|255319892|ref|ZP_05361093.1| multidrug resistance protein K [Acinetobacter radioresistens SK82]
 gi|255303025|gb|EET82241.1| multidrug resistance protein K [Acinetobacter radioresistens SK82]
          Length = 382

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 55/408 (13%), Positives = 125/408 (30%), Gaps = 64/408 (15%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           LK + +L I+ ++    W           S+       +  +I S  SG + +  V++  
Sbjct: 30  LKIVAILFIVAVLIYALWMYFA---SRSVSTDNAYVGADTAQITSMVSGQVTEVLVKDTQ 86

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           Q+ QG  L+  +                                             R+ 
Sbjct: 87  QVKQGDVLVRIDP--------------------------------------------RDA 102

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           ++     +     +K      S+  +SL  +++            + +     A L+  Q
Sbjct: 103 KIALAQAQAELAKAKRQYNQTSANSQSLNSQVSVR---ADEIASAQAQVKKAEADLAKAQ 159

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            D    + L E  A+S+ +++  + ++  +   L   + +        N    ++ L   
Sbjct: 160 ADYERRRKLSETGAISKEEMSSAQTVLDTARASL--TLAQAGLSQAEANRKAAQSTLAAN 217

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             L   + +        A   +++       E+  + +P+ G +V  ++           
Sbjct: 218 EALIRGATERSTPDVLIAQ--ARVEQAMLDLERTEVHAPLDG-VVSRRNVQVGQRVAPGN 274

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-----REKKFKAIIEKID 371
            LM +VP     Y+ A     Q+  V+ G    +    Y D      +   F        
Sbjct: 275 SLMVVVPV-AQLYVDANFKESQLAKVRTGQAVELISDFYGDEVVYHGKVLGFSGGTGAAF 333

Query: 372 PIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +I  Q+      +  +   V + +     + + + +     A V  T
Sbjct: 334 ALIPAQNATGNWIKVVQRLPVRIALDPKELAQHPLRVGLSMNATVDLT 381


>gi|119513064|ref|ZP_01632119.1| hypothetical protein N9414_17727 [Nodularia spumigena CCY9414]
 gi|119462274|gb|EAW43256.1| hypothetical protein N9414_17727 [Nodularia spumigena CCY9414]
          Length = 403

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/376 (12%), Positives = 129/376 (34%), Gaps = 60/376 (15%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPF----SGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           P+   V++ G +     V+ I +P     +  + +  V+ G Q+  G  +   ++     
Sbjct: 57  PVTPKVNALGRLEPAGEVIRISAPTDASGASRVAQLLVDEGKQVNAGDVIAILDN----- 111

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
                                         D L+   +  ++Q+   + + +   +    
Sbjct: 112 -----------------------------RDRLQANLKEAQQQVRVAISRLNQVKAGAKQ 142

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             IS+   +++    ++      +   +  ++ L A L + + +    +NL+++ AV+ +
Sbjct: 143 GEISARAATVRNLQAQLEGEIQIQ---QATTARLEAELQNAEMEFRRYENLYKEGAVAAS 199

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            ++ +   +  +  EL        +  R +     EA        +    D+   Q    
Sbjct: 200 TVDSRRLTLKTAQEELNGARASLASTQRTLTAQIQEAKATLEQTAEVRPTDVAIVQAEVD 259

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--IVPHSK--LTYI 330
             ++ +  ++   +   I +P AG I+  Q       A+  + + +  IV   +    Y 
Sbjct: 260 SAIATVEKMQVEVDTAYIRAPQAGQILRVQ-------ARPGETIGEQGIVELGETTQMYA 312

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID------PIISQQDNNLQTQ 384
            A++    I  ++ G  A +     ++    +   I+++I        ++          
Sbjct: 313 IAEIYESDIGKIRPGQVANI--TSPSNAFAGELTGIVDRIGLKVAKKDVLDSDPTAATDA 370

Query: 385 EYYEVILKITDLAFSD 400
              E  +++ +++   
Sbjct: 371 RVIEAKVRLDEVSSQQ 386


>gi|86145233|ref|ZP_01063564.1| multidrug resistance protein A [Vibrio sp. MED222]
 gi|85836810|gb|EAQ54930.1| multidrug resistance protein A [Vibrio sp. MED222]
          Length = 354

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 93/286 (32%), Gaps = 28/286 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    + + +     N  +S V  S+   + +           E++    +A      +
Sbjct: 85  LVQIDDRDYQSALAQANAHLSVVQSSVHNLIAQQTLQRSQINQAESRVDSAQAEYERAIQ 144

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +   ++L ++N  SQ++++        +  EL E                        +
Sbjct: 145 QVVRSRSLLKRNYASQDEVDSMVAQQKVTQAELEEAKANLVAS---------------ND 189

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L  I+ ++EQ   +  +  ++    +   +   + +P  G I   +S       Q   P
Sbjct: 190 QLIVIASEIEQANASVTEAQAQRDQAQLNLDYTKVYAPADGVI-GKRSVREGLLIQAGAP 248

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           LM +VP +   +I A     Q+  + KG T  V    +     +  + +++   P     
Sbjct: 249 LMSLVP-NNQVWIEANFKETQLSGIHKGQTVEVELDAFP---GQPLEGVVDSFSPATGAK 304

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                 +      T+    V +KIT     +    L  G       
Sbjct: 305 FALLPPENATGNFTKIVQRVPVKITIPDQQELKGRLLPGLSVVATI 350


>gi|159029522|emb|CAO87671.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 427

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/356 (13%), Positives = 117/356 (32%), Gaps = 47/356 (13%)

Query: 44  VSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +++ G I     ++ I +P    S  + +  V+ G  +  G  +   E            
Sbjct: 55  ITALGRIEPRTEIISISAPMLLDSDRVMQLLVDEGDSVKTGQIIAILE------------ 102

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            S + L  ++   +  +     K + +E   +  E      +    +   K+    +   
Sbjct: 103 -SQERLEDNLRQAQEQVKVAAAKLEQVEAGAKVGE------IDANAANVRKIEAQWLGDQ 155

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ------- 213
                        +  +R   +   + L A   + + +    + L+++ A+S        
Sbjct: 156 ATQRTTIQRLTAQLEGDRAAQKATIAKLEAEYRNAKAEFDRHEKLYQEGAISASSFDSKR 215

Query: 214 -------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR-- 264
                    L + +  + +     ++ I E K  L  I     +   E  + L ++S   
Sbjct: 216 LNLETSNQQLTEAKVTLERIERTGKQEIEEAKTTLARIESTGQQQIKEARSTLNQVSEVR 275

Query: 265 --DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
             D+   +      +  +   +    Q  I SPI G +   +  +       +Q ++ + 
Sbjct: 276 GVDVRAAEAEVNAALVAVKKAQTELNQAYIRSPITGKV--IKVNTRVGEQISAQGIVDLA 333

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             +    + A++    I  ++KG TAT+    +      +    +  I   + QQ+
Sbjct: 334 -ETDRMEVIAEIYQSDIGKIRKGQTATITGSAFK----GEVSGKVRLIALKVDQQN 384


>gi|119486441|ref|ZP_01620499.1| hypothetical protein L8106_00565 [Lyngbya sp. PCC 8106]
 gi|119456343|gb|EAW37474.1| hypothetical protein L8106_00565 [Lyngbya sp. PCC 8106]
          Length = 464

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/377 (14%), Positives = 127/377 (33%), Gaps = 49/377 (12%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFS---GIIKKFQVENGSQILQGTPLLTFEDI-ETTDLID 97
            +V++ G +  +  V+++K+  S     I + +V+ G ++  G  +   +        ++
Sbjct: 54  QTVTALGRLEPDGEVIQLKASTSTQESRIAELRVQEGDEVKAGDIIAILDSRDRLQAQLE 113

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  ++  +  ++  K+     +      +      + QL        +T  ++     
Sbjct: 114 QAQKDVEVAKARLEQVKAGAK--SGDLAAQKAQISRLQAQLQGDEAAQKATLQRIQAEWE 171

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                                       S LRA L++ + +    + L+ + A+SQ+  +
Sbjct: 172 GERSAQEATVSRIQAQWEGESTAQAATISRLRAELNNAEAEYQRYQQLYAEGAISQSSFD 231

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ------- 270
            ++  V  S  ++ E +     + R   E   EA        +     + + +       
Sbjct: 232 SKQLNVETSRQKIAEAVANLDRINRTAKEQIIEAVANLDRINRTAKEQIIEAEVTLSRIQ 291

Query: 271 ----RTFADEMSKLTILEKTR-------------------------EQKTILSPIAGTIV 301
               +  +   S+L  L + R                          Q  + SP  G ++
Sbjct: 292 STGSQQISQARSQLESLAEVRPVDVQVAQTEVNQAIANVKQANANLAQVYVRSPQDGVVM 351

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                + +     +Q ++++   ++  Y  A+V    IQ +K G TA +      +I   
Sbjct: 352 D--IHTRAGEVVSNQGIIELG-RTQQMYAIAEVYQSDIQKIKLGQTAKITSEALPEI--- 405

Query: 362 KFKAIIEKIDPIISQQD 378
                +E+ID  + QQ 
Sbjct: 406 -LTGTVERIDHKVQQQS 421


>gi|225856246|ref|YP_002737757.1| BlpC ABC transporter [Streptococcus pneumoniae P1031]
 gi|225724490|gb|ACO20342.1| BlpC ABC transporter [Streptococcus pneumoniae P1031]
          Length = 453

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 69/440 (15%), Positives = 146/440 (33%), Gaps = 32/440 (7%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGII 67
            +R H  +   +  LS++    LI  S++   EI+V+S GEI     +  I+S   + I+
Sbjct: 13  QRRYHNYATVFIIPLSLLFTFILIF-SLVATKEITVTSQGEIAPTSVIASIQSTSDNPIL 71

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V N   + +G  L+ + +             ++ L    +        L    D+ 
Sbjct: 72  ANHLVAN-QVVEKGDLLIKYSETMEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLF 130

Query: 128 EKAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLN 177
               E        +  +Q  D       T ++V N     +S   +++ ++T+++     
Sbjct: 131 SSEDEFGYHNTFMNFTKQSHDIELGISKTNTEVSNQANLTNSSSSAIEQEITKVQQQIGE 190

Query: 178 RLDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQNDLNQ-QERIVYKSTLELRENIH 235
             +L +     RA L +     +++ + L      +Q    +     + +S   L  +I 
Sbjct: 191 YQELRDAIINNRARLPTGNPHQSILNRYLIASQGQTQGTAEEPFLSQINQSIASLESSIA 250

Query: 236 EQKNMLRHI-------NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             K     I       N L  +  +    +L+  S+     +    +   +L    +  E
Sbjct: 251 SIKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLE 310

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKG 345
             T+ +P  G +  N  F   N       + +I P    ++   I   V+   +  + KG
Sbjct: 311 NNTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKG 370

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            T  ++     +         ++ ID   ++ +     +      L   D         +
Sbjct: 371 QTVRLKLEKIGNHGT-TIIGQLQSIDQTPTRTEQGNLFKLTALAKLSNEDSKL------I 423

Query: 406 RNGFPAEVLFTAKNTTLAQE 425
           + G    V       T    
Sbjct: 424 QYGLQGRVTSVTTKKTYFDY 443


>gi|56551861|ref|YP_162700.1| efflux pump membrane protein [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761820|ref|ZP_04759906.1| efflux pump membrane protein [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260752579|ref|YP_003225472.1| efflux pump membrane protein [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|56543435|gb|AAV89589.1| efflux pump membrane protein [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373734|gb|EER63294.1| efflux pump membrane protein [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258551942|gb|ACV74888.1| efflux pump membrane protein [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 401

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 91/299 (30%), Gaps = 53/299 (17%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           ++ +  SG + +  V +  Q+ +G  L+           D +K+S+          +   
Sbjct: 85  QVMALVSGPVAQVFVSDTQQVQKGDLLVRLNP-------DDQKISLAKAEADFAAAERKF 137

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
              +   D L +A  +++  +      Y S  S                           
Sbjct: 138 GQTSASSDALSQAIVAQQANVEQAEANYLSAQS--------------------------- 170

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
                             + D    ++L E  AVS++++      +  +  + R  + + 
Sbjct: 171 -------------TYHRAETDYNRRRSLVESGAVSRDEMTA----ISNALEKARAALLQS 213

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              +   +   +EA   F      I               + L        +  I +P+A
Sbjct: 214 HAAVDQAHAAKEEAIGNFEANQALIKNTTVSTNPQVRAAKAALDQARLDNSRLEIRAPMA 273

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           G +   Q            P+  IVP  +  Y+ A     Q+  VK G TATV+   Y 
Sbjct: 274 GVVTQRQV-QVGQRVNVGTPIATIVPI-EQIYVDANFKETQLGKVKVGQTATVKSDLYG 330


>gi|93005836|ref|YP_580273.1| secretion protein HlyD [Psychrobacter cryohalolentis K5]
 gi|92393514|gb|ABE74789.1| secretion protein HlyD [Psychrobacter cryohalolentis K5]
          Length = 463

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 65/419 (15%), Positives = 129/419 (30%), Gaps = 87/419 (20%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           K+    +L  +  L +IG+  LI ++  L P   ++  +     +     I    SG + 
Sbjct: 122 KKKSFFNLALLIALIVIGV-ALILYAWKLPPFTPTMQQTNNAFVKGQTTIISPQVSGYVT 180

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  VE+ + ++ G  L+  +D              +  +  ++  ++ +D          
Sbjct: 181 EVAVEDFANVVAGDLLVKIDD--------------RTFQQQLEQARANID---------- 216

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                       I+   RS   + T      +     E      
Sbjct: 217 ----------------------------IALTNRSSNAQDTGTSQAQIQAR--EADVYSA 246

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  + S ++D+   + L    AVS  D+   E  + K+   +++                
Sbjct: 247 KVSVDSAREDVNRYQGLIAIGAVSSADVAHAEAQLAKAQAGVQQA--------------- 291

Query: 249 DEANLEFA-NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            EANL+ A    K+ +           +  +     +   +   I +P +G +      +
Sbjct: 292 -EANLQVAVEGSKKTTASRSSLDANIKNAEAAAKQAQINLDNTIIRAPESGQLSQLSVKT 350

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Y      LM IVP        A     Q+ ++  G  AT+        R   F   +
Sbjct: 351 -GQYVTAGTQLMYIVPKGVWII--ANFKETQVANMTIGEAATIHVDALGGTR---FSGRV 404

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAK 418
             I P    +      N  T  Y ++     ++I   +   +   LR G    V    K
Sbjct: 405 SNISPATGSEFSAGAANPATGNYIKIAQRIPVRIDLDSNQPDLARLRPGMSVSVDVDTK 463


>gi|209884370|ref|YP_002288227.1| secretion protein HlyD family protein [Oligotropha carboxidovorans
           OM5]
 gi|209872566|gb|ACI92362.1| secretion protein HlyD family protein [Oligotropha carboxidovorans
           OM5]
          Length = 416

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 100/325 (30%), Gaps = 32/325 (9%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R +     +      +K  V +       + L       +          I++   ++K 
Sbjct: 106 RANNTMLGARAAGYLSKIAVADNTHVKAGDLLFQIDDGDYRIAVDNARARIATQEATIKR 165

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              +  +        + +    +A     + D +    L EK   S+   +Q +    ++
Sbjct: 166 IARQAVAQQSAVEQAQAQLDSAQAAAKRAEADFSRQSQLNEKGFASKAAFDQAQATRDQA 225

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              ++            ++                I     + +    +  + L   E+ 
Sbjct: 226 VASVQGGQASLDAAQAQVDV---------------IKAQQAEAEGQLGELKTALAKAERD 270

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
               TI +PI G +  N+  ++ +  Q  Q L  +VP     +I A     Q+  ++ G 
Sbjct: 271 LSFTTIRAPIDG-VFSNRIVNAGDNIQVGQRLANVVPLDD-VFIDANFKETQLARIRPGQ 328

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDL 396
              +       ++ +     +E + P           +  T  + +      V +++   
Sbjct: 329 PVHISVDA---VKGRDIVGTVESLSPASGSVFTLLPPDNATGNFTKIVQRLPVRIRVPK- 384

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTT 421
           + +  N+ LR G   EV    +  T
Sbjct: 385 SVAQENL-LRAGMSVEVEVDTRKLT 408



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 12/166 (7%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K  V + + +  G  L   +D +        ++++ N R  I T+++ +  +  + 
Sbjct: 118 GYLSKIAVADNTHVKAGDLLFQIDDGDY-------RIAVDNARARIATQEATIKRIARQA 170

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              + A E  + QL           +       S +                 R      
Sbjct: 171 VAQQSAVEQAQAQLDSAQAAAKRAEADF--SRQSQLNEKGFASKAAFDQAQATRDQAVAS 228

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
               +A L + Q  + ++K    + A ++  L + +  + K+  +L
Sbjct: 229 VQGGQASLDAAQAQVDVIK---AQQAEAEGQLGELKTALAKAERDL 271


>gi|322377678|ref|ZP_08052168.1| BlpC ABC transporter [Streptococcus sp. M334]
 gi|321281443|gb|EFX58453.1| BlpC ABC transporter [Streptococcus sp. M334]
          Length = 453

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 63/439 (14%), Positives = 147/439 (33%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEIAPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +          +  ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALETQLQRLEKQKEGLGILRQSLEKATDLFS 131

Query: 129 KA--------FESREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNR 178
                     F +  +Q  D       T ++V N     +S   +++ ++T+++      
Sbjct: 132 GEDEFGYHNTFRNFTKQSHDIELGITKTNTEVSNQANLANSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +     +++ + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIINNRARLPTGNPHQSILNRYLVASQGQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P  G +  N  F   N       + +I P    ++   I   V+   +  + KG 
Sbjct: 312 NTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGN-HGITIIGQLQTIDQTPTRTEQGNLFKVTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|293420889|ref|ZP_06661323.1| conserved hypothetical protein [Escherichia coli B088]
 gi|291324759|gb|EFE64175.1| conserved hypothetical protein [Escherichia coli B088]
          Length = 111

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 39/87 (44%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            +   L++    +L  M +  ++ ++  + W+   P++      G I+       I++  
Sbjct: 25  DVQAALQQEKHHALFLMVIFLLVLVVTFVIWAWNSPLDEVTRGQGSIIPGSREQVIQTLD 84

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDI 90
            GI+K  +V  G  + +G  LLT +D 
Sbjct: 85  PGILKTLEVREGDIVEKGQVLLTLDDT 111


>gi|150015152|ref|YP_001307406.1| RND family efflux transporter MFP subunit [Clostridium beijerinckii
           NCIMB 8052]
 gi|149901617|gb|ABR32450.1| efflux transporter, RND family, MFP subunit [Clostridium
           beijerinckii NCIMB 8052]
          Length = 479

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 117/363 (32%), Gaps = 73/363 (20%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           IK+ +VE G ++     L   +  +    I+  + +I                       
Sbjct: 102 IKEVKVELGDKVKANDVLAVLDTNKLEKQINELEATI----------------------- 138

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
              A  S + +L +   +Y++  ++  +     +  +          +   +LDLENK  
Sbjct: 139 -STADASNKVELANAESEYNTALTQSNDENNGDIKNAEVA-------LEGAKLDLENKK- 189

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                     K     K LFE  A+S+ D++  E     +           KN+   + +
Sbjct: 190 ----------KIYENNKLLFENGAISKQDMDTYEISYKNAQNTFDNCTVSLKNIKTKVQQ 239

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
               A  ++     +              +   +  L+   +   I++P+ G I    + 
Sbjct: 240 NLTTAKNKYDEARVKAEDK---------SQHVSIENLKNDLKDAVIIAPVDGIITAKNA- 289

Query: 307 SSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
              +    S   L +I      T +R  V    I+ +K G  A V+              
Sbjct: 290 ---SVGNPSTGALFEIK-DEDNTTVRLDVKEVDIEKIKVGQKAEVKTDSTGADI---ING 342

Query: 366 IIEKIDPIISQQD--------NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +  I PI   +D        ++   +  +EV +KITD      N +L+ G  A+     
Sbjct: 343 EVVSIQPIAEAEDKSSLTLNNDSNDEEAKFEVKIKITD-----TNYKLKIGMKAQADIIV 397

Query: 418 KNT 420
              
Sbjct: 398 DEK 400


>gi|218506988|ref|ZP_03504866.1| HlyD family type I secretion membrane fusion protein [Rhizobium
           etli Brasil 5]
          Length = 232

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 81/230 (35%), Gaps = 4/230 (1%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            +   +I  +  G+I     V  I+S   G      V NG ++  G  L+  +  E    
Sbjct: 1   YVGTFDIVATGQGKIQPTGRVKVIQSLEVGKTIAVPVSNGIKVEAGDILVELDPTEARAE 60

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF----LGKYHSTCSK 151
           +D   +S+  LR  +    + L  +         +   R E + +F      +  +  + 
Sbjct: 61  VDALSISLSTLRAEVARRSATLAQVAAWQKGDLWSGARRIEIVPEFADSIPAEIRTRETL 120

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           ++   +  +  +L     +    +          +  +AL+++    +TM  NL + +A 
Sbjct: 121 LYTSDLEQLASTLDSLAAQRNQQFAALKRYSEMVAAQQALVATLTDRVTMRSNLVDLSAG 180

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           S++ +     +  K    L E I ++      I     E       ++ +
Sbjct: 181 SRSGVIDAVEVKQKEEATLAEQIGQRAEAETAIVAATSEGLKAIKTFVAD 230


>gi|17231139|ref|NP_487687.1| hypothetical protein alr3647 [Nostoc sp. PCC 7120]
 gi|17132780|dbj|BAB75346.1| alr3647 [Nostoc sp. PCC 7120]
          Length = 434

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/335 (13%), Positives = 111/335 (33%), Gaps = 21/335 (6%)

Query: 44  VSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFED-IETTDLIDLK 99
           +++ G +  E  V+ + +P       I +  VE G ++  G  +   +        +   
Sbjct: 57  ITALGRLEPETEVISLSAPLALDGDRIAQILVEEGDEVQAGQVVAILDSRARLQTAVLQA 116

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  I+  +  ++  K+     + +        ++  E+L        +   +      + 
Sbjct: 117 EKQIRVAQAKLNQVKAGAKTGDIRAQ------QASVERLQAQSQGDRTGQQQTIARIEAQ 170

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                  +   +R +     + E +    + L S      + +         ++  L++ 
Sbjct: 171 WQGDRIAQEATIRKLEAELKNAEAEYQRYQQLYSEGAISSSAIDTRRLSVETAKEQLDEA 230

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLEQNQRTFAD 275
           + ++ +      + + E K  L  IN   ++   E    L  I+     D++  Q    +
Sbjct: 231 KAVLNRINSTASKELAEAKVALNRINATSNKQISEAKATLTSIAEVRPVDVQAAQTEVEE 290

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            ++ L       E   I +P AG I   +  +          +  +    ++  I A+V 
Sbjct: 291 AIASLKRATTDLEAAYIRAPQAGQI--LKIHTRVGEKISDDGIADLAQTDQMLAI-AEVY 347

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
              I  VK G  A +    +      + +  + +I
Sbjct: 348 QTDIGKVKLGQQAVITSQAFG----GELRGKVSQI 378


>gi|320104426|ref|YP_004180017.1| hypothetical protein Isop_2903 [Isosphaera pallida ATCC 43644]
 gi|319751708|gb|ADV63468.1| hypothetical protein Isop_2903 [Isosphaera pallida ATCC 43644]
          Length = 679

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 98/303 (32%), Gaps = 20/303 (6%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           F+     V E    +  E+L +   K     S      I+     L MK      +  +R
Sbjct: 279 FVRKGEVVCELDSAAFREELENQKIKVEEARSNYNQVRIALEVNELAMKEYLEGVLEQDR 338

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             +E      R LL   +++      +  K    +N        + +  + LRE +  + 
Sbjct: 339 QAIETYIKQCRDLLFQAERNYQWSLGVVAKKLQPENQELADRLTLERCRINLREALGMRT 398

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +         +   E+    + I  DL   +     E  +L  +EK      I++P  G
Sbjct: 399 QLEDFTAPRILK---EYQAKSEAIKSDLLSKESVLRQEEQRLQRIEKAIANCVIVAPRDG 455

Query: 299 TIVYNQ----------SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
            + Y                    +Q QP+   VP      ++ ++   +I  +  G T 
Sbjct: 456 ILSYVNETNFWGSIDYRIEPGAIVRQGQPIFS-VPDPSELILKVRINESKISRIVPGQTV 514

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           ++R     D     F   +  +  I +    +L   + Y   ++I   A       L+ G
Sbjct: 515 SIRVDAVKDRI---FNGRVLDVTLIPAPAQGSLSDVKVYNARVQIDAAADLK---LLKPG 568

Query: 409 FPA 411
             A
Sbjct: 569 LTA 571


>gi|307150749|ref|YP_003886133.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 7822]
 gi|306980977|gb|ADN12858.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           7822]
          Length = 474

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/312 (10%), Positives = 100/312 (32%), Gaps = 32/312 (10%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V+ G Q+ +G  +   E  +  + ++    ++++    +   ++       + 
Sbjct: 75  GRIIRLFVKEGDQVSKGQKIAQLEPTKQEEDVNSAASTVQSRIAALTQAQADFRQTQAQR 134

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D  +      +  L +      S  + +                       L +++    
Sbjct: 135 DSAKADIARFQADLANAEANARSKEADLQRATAEE---------------DLAKINYGRA 179

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             L++  +   Q      +NL      ++ ++    +I   +   ++      +  + ++
Sbjct: 180 EFLVKEGVQPQQDLDNNTRNLN----TAKANVESARKIRDAALASVQAAEGALQAAINNL 235

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                         +K     ++Q Q    +   +L  + +     T+ +PI G +    
Sbjct: 236 QAA--------NERVKAAQSVVKQAQANIGEAQGQLGSINQNLIYNTVFAPIDGFVGDFN 287

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
              + +Y +  + L  I   +K+  +   +  +    ++ G    +           + K
Sbjct: 288 QKKNGDYIKTGEELTTIT-DNKVFLLNINIPTEHYNRLRIGLPVQL----INADGTPRIK 342

Query: 365 AIIEKIDPIISQ 376
             +  I P+ ++
Sbjct: 343 GEVSFISPLANE 354


>gi|191639315|ref|YP_001988481.1| SppE [Lactobacillus casei BL23]
 gi|190713617|emb|CAQ67623.1| SppE [Lactobacillus casei BL23]
 gi|327383399|gb|AEA54875.1| AbpD bacteriocin export accessory protein [Lactobacillus casei
           LC2W]
 gi|327386585|gb|AEA58059.1| AbpD bacteriocin export accessory protein [Lactobacillus casei
           BD-II]
          Length = 459

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 59/431 (13%), Positives = 147/431 (34%), Gaps = 54/431 (12%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           + ++T + + P++++V+  G      N +               + G  + +G  LL + 
Sbjct: 46  VTVLTAAEIAPVKMAVTVQGT---AANRIVTNHM----------KEGKHVKRGDTLLVYH 92

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D+     + + +  +  L+      K+ L+ LN      +  F S ++       + + +
Sbjct: 93  DVAHPAQLKVLEQQLATLKDQ----KAQLEVLNQSIAANKNLFASPDKFGYQQQVRDYLS 148

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             +V+     +++ +  +   + + I          S      +   Q  +   + L + 
Sbjct: 149 QRRVYELESEALHATQGVADGKSKEIDQLLQTSMQASEAKMTAIREAQMAIRTDRPLSDN 208

Query: 209 NAVS-------------------------QNDLNQQERIVYKSTLELR-ENIHEQKNMLR 242
           +A +                         Q+ L        ++   LR + I++++  L 
Sbjct: 209 HAYNYLYLQYKAEAKNADAANLNSLKGQYQSQLQSLLTTEKETLASLRTQRINQKQADLS 268

Query: 243 HINELYDEANLEFAN--YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                 +EA L        + ++ +  + Q+   +  +KL  L+   +   + +  +G +
Sbjct: 269 AQQTGQNEAKLASLQSHMQQTMTAEQVKVQQGTQEGEAKLAALKDESKNYQVKASASGVL 328

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
               S S + Y      L +I+P     K   ++  V+P +I  +K+G +  +R      
Sbjct: 329 HLEASLSGNKYIPAGTVLAQILPDLATQKEAELKLAVSPAEIMSLKRGQSVRLRIAE--- 385

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                   +  +ID I      N +   Y++V  ++         +    G   +     
Sbjct: 386 -NVPSPMTLTGRIDAIDVAPTVNAKVGNYFKVQARVPLSERQRQTLHY--GIAGQAAVIT 442

Query: 418 KNTTLAQEIIH 428
              T  Q  + 
Sbjct: 443 GTKTYWQYFVD 453


>gi|162455455|ref|YP_001617822.1| putative secretion protein [Sorangium cellulosum 'So ce 56']
 gi|161166037|emb|CAN97342.1| putative secretion protein [Sorangium cellulosum 'So ce 56']
          Length = 543

 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/382 (11%), Positives = 115/382 (30%), Gaps = 59/382 (15%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVEN-GSQILQGTPLLTFEDIETTDLIDLKKVS 102
            S S  +        +++P  G +   +++  G+++  G  L+  +              
Sbjct: 202 ASVSARLEVGQAAHRVETPLGGRVAAVRLDLLGAEVAAGDVLVELD-------------- 247

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           ++ LR  +D +++ L  +  +   L     +R   L D      +   +       +   
Sbjct: 248 VEPLRRDMDDKQARLSAIAGQMGPLRAEIAARSRALRDGAEAARARIDEAKARLKEAEAG 307

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +   +L   R++                              L +   VS+ +  +    
Sbjct: 308 ARFQELEAARAV-----------------------------RLRQDGLVSEAEAARLAAE 338

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                                      E   E A   +E +      +       + +  
Sbjct: 339 ALSRRSATEALDRAAARADVERRTGQSEQQAELARLDREAAS----LEGERLVLEATIAG 394

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
           L    E++ I SPIAG +       + ++ ++   +  +VP  +   + A+  P  +  +
Sbjct: 395 LLAEIERRKIRSPIAGRVGEITVLRAGSFVREGDVVAAVVPPGE-LRVIAEFPPSSVGRI 453

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           + G    +R   +           +E++     +            + +++       + 
Sbjct: 454 RAGQAGRLRLDAFPWTEYGTLATTVERVASEAQEG----------RIRVELGVRPDPASP 503

Query: 403 IELRNGFPAEVLFTAKNTTLAQ 424
           I +++G P  V+   +  + A 
Sbjct: 504 IPMQHGLPGNVVIEMERVSPAS 525


>gi|42527931|ref|NP_973029.1| bacteriocin ABC transporter, bacteriocin-binding protein, putative
           [Treponema denticola ATCC 35405]
 gi|41818976|gb|AAS12948.1| bacteriocin ABC transporter, bacteriocin-binding protein, putative
           [Treponema denticola ATCC 35405]
          Length = 379

 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 75/429 (17%), Positives = 150/429 (34%), Gaps = 70/429 (16%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           +  + L+         +  +  +  +    W IL   E  V +SG +   +NV  +KS  
Sbjct: 12  YTGEVLQEQKTGIFSSVISIICLLALCTTAWLILGKKEEVVRASGMVRPIENVSFVKSFT 71

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           +G I+     +G  + +G  LL+ +D          + ++++L   I+           K
Sbjct: 72  AGKIQNIHFTSGQYVEKGAILLSIDDTVAQKE----RQNLEDLMLKIE----------EK 117

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               E   +S E+ L+    +      ++ NY          +K    +++ LN    E 
Sbjct: 118 IKDTEACIKSAEKDLMLVPFERKIAYKRMENY--------FSVKTNLEKALELNSRIFEE 169

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +L    L++ + +L  +    EK   S+ DL Q +   + S L  +E +  QK  L +
Sbjct: 170 EKALPDFSLANQKIELLNLN--VEK---SKRDLEQYKNSFFHSLLSEKEALEFQKENLSN 224

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                +E+ L+       IS ++++        +S L   +     + IL          
Sbjct: 225 SIFKMEES-LKLFTVYAPISGEVQE--------ISSLNCGDNVFSGQEIL---------- 265

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTY-IRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                           KIVP S     +  ++   +   V++     ++FP +       
Sbjct: 266 ----------------KIVPSSSENIRVVLRLPSSKAGLVREDMKVRLKFPAFPHHEFGS 309

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKN 419
               +E I P +            Y V +K+      D       L+ G  AE     + 
Sbjct: 310 LDGQVETILPDVFL----GAKSSEYAVFVKLDGNTLPDKKGMAHFLKVGLDAEASIITET 365

Query: 420 TTLAQEIIH 428
            ++   I+ 
Sbjct: 366 GSILSFILK 374


>gi|289164871|ref|YP_003455009.1| hypothetical protein LLO_1537 [Legionella longbeachae NSW150]
 gi|288858044|emb|CBJ11904.1| hypothetical protein LLO_1537 [Legionella longbeachae NSW150]
          Length = 425

 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 60/374 (16%), Positives = 125/374 (33%), Gaps = 64/374 (17%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEI-- 59
                +N++   P S   + +  ++ I G + W I   I   V   G I+   N   I  
Sbjct: 18  REDFQQNIRIITPKSWIYLIIFFMLIISG-VLWLIFGKITTLVEGQG-IIFAKNAEIINV 75

Query: 60  -KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
                 G +K+  V+ G ++ +G  L T  +             I+  +  +        
Sbjct: 76  MSPISGGYVKQLWVDPGVKVKKGQLLATLVNPNMNSEAKELSNYIEQQKIKL-------- 127

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                                    +   T     +  +  +  S+    T   S+   +
Sbjct: 128 ------------------------AELTKTAKFEIDIRLKQIQDSINHAQTINESLQEKK 163

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             LE+               L + +  F+K  +S+ +L   +   Y S    +E I + +
Sbjct: 164 NRLESL--------------LKIQEAAFKKGILSRLELTDIQVAYYDS----KEQITKNE 205

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           N L  +N+  ++    +   ++++   L Q+Q      +  + + E      T+LSP  G
Sbjct: 206 NTLIELNQDKNDYIESWNTKIRDLQEKLAQSQFNLKKLIENIKLTE------TVLSPEDG 259

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ-HVKKGYTATVRFPHYAD 357
            IV N+     ++  + Q L+ I+ H+K   + A      +   +  G  + V   H   
Sbjct: 260 -IVSNEYVKPGDFLTEKQTLINIITHNKDLEVIAFF-NADVGKKIVVGMESKVFPKHVNV 317

Query: 358 IREKKFKAIIEKID 371
           +        +  + 
Sbjct: 318 LEYGGIVGKVTFVS 331


>gi|120553555|ref|YP_957906.1| secretion protein HlyD family protein [Marinobacter aquaeolei VT8]
 gi|120323404|gb|ABM17719.1| secretion protein HlyD family protein [Marinobacter aquaeolei VT8]
          Length = 392

 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/411 (12%), Positives = 126/411 (30%), Gaps = 61/411 (14%)

Query: 8   NLKRNHPASLKR-MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L    P   +    +L+ + ++G   W +   +   V +   +  +  +V + S   G 
Sbjct: 30  ALPPARPRPWRWYGAILATLIVLGGGGWWLYQQLTHVVVTDARVAAD--IVAMSSRVPGW 87

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +   +V +G    +G  L+  +D E+              R  ++   + L  +  + + 
Sbjct: 88  VTVLEVTDGDAAQRGRVLIRIDDRES--------------RLRVEALDAQLAGIARRREE 133

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +E      + Q    +    +          ++  +    +    R+             
Sbjct: 134 IEARIALTDRQTQSRITAKQAAVRAAEARLAAAAAQLDLARQENDRA------------- 180

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                           + L    A+++  L+Q    +  +  +      + +N    + E
Sbjct: 181 ----------------EKLAPSGAINRARLDQTRAALETAKQQTLSAQADLENARAALAE 224

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                          +   L +         ++    E   E +TI+ P  G +V     
Sbjct: 225 AEAARGELTV-----LRTQLAELGPEEQRLRAQKAQAELDLEDRTIVMPFDG-VVDRVFV 278

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
               Y    Q L+ +V   +   + A V    I+  + G +  +        R   F+  
Sbjct: 279 DKGEYVTPGQRLL-MVHDPERVRVEANVKETDIRFFRPGKSVMITVDALPGRR---FEGR 334

Query: 367 IEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAE 412
           + ++    + +     N   +  + ++  ++   +A   +  EL+ G   E
Sbjct: 335 VTRVGQSATSEFALLPNPNPSGNFTKITQRLPVRIAVQQDGGELKPGMMVE 385


>gi|288929227|ref|ZP_06423072.1| hemolysin secretion protein [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288329329|gb|EFC67915.1| hemolysin secretion protein [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 430

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 122/359 (33%), Gaps = 27/359 (7%)

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++ +G  +   E       I   +  + NL  ++       D L                
Sbjct: 84  KVKKGDVISYLESGANYRHILKVEGLLSNLNKNMQAAIDLPDTL---------ILGEVSS 134

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
               F+  Y      + +    +++R+L+ ++T  +S+  N   + N+ +L R LL    
Sbjct: 135 AYNAFMLAYMQYRRVLSSNIYGTMHRNLRQQITSDKSVIAN---INNEVALKRQLLHVSA 191

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             L     L     +S+ +  QQ    + + L L+E +   ++         +   +E  
Sbjct: 192 NQLKKDSVLLAAKVISEQEFQQQ----HAAHLSLQEALLNLQSTRMLKQSEVNHNQMEIQ 247

Query: 257 NYLKEISRDLEQNQRTFADEMSKL-TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             L E S   ++    F    ++L  ++   +E+    +P+AG + Y   +  + + Q  
Sbjct: 248 RILLEESESKDKVYTDFVTRKNELSNVINIWKERYLQYAPVAGQLEYLGFWRDNRFVQNG 307

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q L  I+P          +    +  V  G    V+  ++      + K +++ I  I  
Sbjct: 308 QELFSIIPSKNNILGEVTIPSFGVGKVAIGQHVNVKISNFPYDEYGQLKGVVKSISRISH 367

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP------AEVLFTAKNTTLAQEIIH 428
           +     +  + Y V++       ++    L    P             K   L + +  
Sbjct: 368 KMKVQDKEVDAYLVLISFPHGTLTNFGKRL----PLDFESNGTAEIITKRKRLIERLFD 422


>gi|302038533|ref|YP_003798855.1| putative multidrug resistance protein A [Candidatus Nitrospira
           defluvii]
 gi|300606597|emb|CBK42930.1| putative Multidrug resistance protein A (modular protein)
           [Candidatus Nitrospira defluvii]
          Length = 515

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/295 (15%), Positives = 92/295 (31%), Gaps = 26/295 (8%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +  +   +     + E Q ++                +      L  ++ R+ S+++NR 
Sbjct: 79  VAAQASGIVTQVLAEETQFVNRGDLMIKLDEHQAYAALGRARGRLGEEVRRIASLFINRK 138

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L  K    RA L   + D+   +      A+S+  L      +     E+RE   E  +
Sbjct: 139 QLAEKLRSRRARLELAEHDMDRYQRAAPSGAISKQILQNTADKIASLDAEVRETQAELDS 198

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           +   I                                  +L        ++ I +PI+G 
Sbjct: 199 LDAQIGGTT------------------VMAHPAVDLAKHQLIEAHLEYARQQIRAPISGY 240

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +   +     +  Q    LM IVP     ++ A +   ++QHV+ G  A V    Y   +
Sbjct: 241 VAK-RKAQVGDRVQPGALLMTIVPLDH-LWVEANLRETELQHVRPGQPALVNVSLYGSKQ 298

Query: 360 E--KKFKAIIEKIDPIISQQDNNLQTQEYY----EVILKITDLAFSDNNIELRNG 408
                 + ++       +    +  T  +      V ++I   A       +R G
Sbjct: 299 TFHGTVEGLVPGSGSAFALLPPDNSTGNFIHIVERVPVRIALPADELREHPIRPG 353



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/191 (11%), Positives = 63/191 (32%), Gaps = 13/191 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N+V + +  SGI+ +   E    + +G  ++  ++ +          ++   R  + 
Sbjct: 72  VTGNLVPVAAQASGIVTQVLAEETQFVNRGDLMIKLDEHQA-------YAALGRARGRLG 124

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E   +  L      L +   SR  +L   L ++     +      +   + L+    ++
Sbjct: 125 EEVRRIASLFINRKQLAEKLRSRRARL--ELAEHDMDRYQRAAPSGAISKQILQNTADKI 182

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            S+     + + +   L A +           +L +   +  +     E    +    + 
Sbjct: 183 ASLDAEVRETQAELDSLDAQIGGTTVMAHPAVDLAKHQLIEAH----LEYARQQIRAPIS 238

Query: 232 ENIHEQKNMLR 242
             + ++K  + 
Sbjct: 239 GYVAKRKAQVG 249


>gi|77917886|ref|YP_355701.1| putative MacA-like membrane transport protein [Pelobacter
           carbinolicus DSM 2380]
 gi|77543969|gb|ABA87531.1| putative MacA-like membrane transport protein [Pelobacter
           carbinolicus DSM 2380]
          Length = 417

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 67/424 (15%), Positives = 129/424 (30%), Gaps = 108/424 (25%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS------------ 64
           +  + +L I+ I     W  L   E     + ++++   V ++                 
Sbjct: 9   IILLAVLLIVSIGSYFGWLALHKKETVSVLATDVVSRGPVRQVLEQTGIVKTQVGAIVKI 68

Query: 65  -----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
                G I+K  V+ G ++ +G  +   ++              + +R  +   ++ L  
Sbjct: 69  GTRATGTIEKMLVQVGDRVSRGQLVARIDN--------------REIRAQVAEARAGL-- 112

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY-LNR 178
                                                     R+ + +L R+R I  LN 
Sbjct: 113 ------------------------------------------RTDEAELQRVRRIEPLNI 130

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            + + + +L RA     + +   ++ L  +  VSQ++L   E    ++ +E R     Q 
Sbjct: 131 EEAQAELALTRAQAEYLRSNYQRIRQLAAEGIVSQDEL---ENAQQQAEVETRREAARQT 187

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            + R                 +E   +L Q Q       +KL  L+       I SPI G
Sbjct: 188 ALER---------------LQQEYEENLRQAQLAVQSSRAKLDALQVRLSYTDIHSPIDG 232

Query: 299 TIVYNQSFSSSNYAQQSQPLMKI--VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            +    +            +  +  V  +    +   V    I  V  G     R   Y 
Sbjct: 233 IVSQVTA-QEGETIVAGLQVANLITVLDTSRLEMWIYVDETDIGQVSPGQQVEFRVDAYT 291

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           D   K F   I+ + P    +DN +    YY+ ++ I     +     LR     +V   
Sbjct: 292 D---KVFPGTIQTVYPEPEIRDNIV----YYKALVAIPKPEAA----WLRPEMTTQVQIV 340

Query: 417 AKNT 420
               
Sbjct: 341 VAEK 344


>gi|149195362|ref|ZP_01872448.1| hypothetical protein CMTB2_04277 [Caminibacter mediatlanticus TB-2]
 gi|149134494|gb|EDM22984.1| hypothetical protein CMTB2_04277 [Caminibacter mediatlanticus TB-2]
          Length = 375

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 57/366 (15%), Positives = 124/366 (33%), Gaps = 63/366 (17%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+K  V  G  + +G  L   +           ++  K L  +I+     ++ L+ + 
Sbjct: 53  GKIEKIYVNEGDNVKKGELLAKLDT-------KNLEIQKKELEFNINALAKNIEALSLQK 105

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           + L+K                 +T  K+    ++ +  ++K K   + +    R  L+N 
Sbjct: 106 EKLKKDI---------------NTNLKINAIELAKLQDTIKAKAFGIDAKIYKRNKLKN- 149

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                        D    + LF++N +S+      +        E+  +     +++++ 
Sbjct: 150 -------------DYLRFERLFKENKISREKYETIKTAFLALKDEINADKSMLDSLIKNK 196

Query: 245 NELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             L  +  L   N  KEI R    +E +Q+       KL ++ +  +   + +P +G I 
Sbjct: 197 KLLMQKREL-ILNSKKEIERLKKTIESSQQKLQALNEKLALINQNIKDSYLYAPFSGKIA 255

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSK----LTYIRAKVTPKQIQHVKKGYTATVRFPH--- 354
              + + +        ++ +V  +           K+  K I     G    +       
Sbjct: 256 KKFANN-NEVIGAGMKVLSLVNLNNLYVLDLLEETKM--KGIGK---GCDVKIHIDALNK 309

Query: 355 -YADIREKKFK---AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
            +    EK      A    +   IS  +     Q +Y V ++   +     N+ +  G  
Sbjct: 310 DFDGYIEKILPASAATFALVPRDISSGEFTKLAQRFY-VRIRFKKI---PKNVLV--GMS 363

Query: 411 AEVLFT 416
            EV+  
Sbjct: 364 GEVVIK 369


>gi|319788933|ref|YP_004090248.1| efflux transporter, RND family, MFP subunit [Ruminococcus albus 7]
 gi|315450800|gb|ADU24362.1| efflux transporter, RND family, MFP subunit [Ruminococcus albus 7]
          Length = 462

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 57/386 (14%), Positives = 123/386 (31%), Gaps = 70/386 (18%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   +S++G ++    V          + + +V  G  + +G  L  F+  E  +  D  
Sbjct: 52  LSKVISTTGNVIGNGTVDVTTKLTC-PVSEVKVSLGDMVKEGDLLCEFDPTELQEEYDTL 110

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  + N               ++K +  + +   R+ +      +     ++        
Sbjct: 111 KKKMDN---------------SDKKEKSDSSKNQRDLEAAKTKKEAALARAQRVIDKAEE 155

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V      K   +   Y N ++  + +     + +S ++    + +L +    +++  N  
Sbjct: 156 VRDDAYEKYNSLCGEYNNAVNNNDPNYDYTGVFASLKQLEAGLSDLDDAVTTAKDGYNDT 215

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E     +  +L++ I  +   +                                +D+   
Sbjct: 216 ESQWNDTIQKLQDVIDGEAFDIG-------------------------------SDDQKT 244

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP-LMKIVPHSKLTYIRAKVTPKQ 338
           L  L +  EQ  + +P +G I         +    S P LM IV ++  T I   V    
Sbjct: 245 LDKLAEQIEQCKVYAPQSGIITALNVN-EGSV--PSSPSLMTIV-NTDKTVIELTVKETD 300

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAI-----IEKIDPIISQQDNNLQTQEYYEVILKI 393
           I  + +G  A V          K          I +I  ++S   +   +   Y+V + +
Sbjct: 301 ITKIAEGMKAKV--------TSKVLPGEEFAASITRIVNVVSTDVSAEGSSSGYKVEVTL 352

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN 419
            +      N  L  G  A V  T + 
Sbjct: 353 DE-----TNDSLLIGMTASVDITIEE 373


>gi|83313097|ref|YP_423361.1| multidrug resistance efflux pump [Magnetospirillum magneticum
           AMB-1]
 gi|82947938|dbj|BAE52802.1| Multidrug resistance efflux pump [Magnetospirillum magneticum
           AMB-1]
          Length = 343

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 106/378 (28%), Gaps = 86/378 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + ++  I    +G + +    +   + +G  L+  ++              ++ R  +D
Sbjct: 39  VDGDITTISPKVAGHVVELLARDNRAVAKGDVLVRIDE--------------RDYRARLD 84

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                                                        + +    L     R+
Sbjct: 85  ----------------------------------------EAAGQVKARLAQLIQIDDRV 104

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                         S  RA +   + D    + L  ++ VS+   +  +    ++   L 
Sbjct: 105 AVQEAVITQSGASISAARAEMVRAKADYERSRALVREDYVSRQRFDITQADAARAEAGLT 164

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +    +   R ++ L  E N+  A                     + L + E   E  T
Sbjct: 165 GSGAGLQAARRQLSVLASERNVALAQ---------------LEQAKATLVVAETELEATT 209

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G I  N++     Y +  Q L+ +VP     +I A     QI  +  G    ++
Sbjct: 210 IRSPVDGVI-GNRAVRDGQYVRPGQTLLAVVPLGN-VWIDANFKETQIGRMTPGNRVEIK 267

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDN 401
              +           ++   P    +         T  + +      V +++   +    
Sbjct: 268 VDAFPGA---VIGGSVDSFAPASGAKFSLLPPENATGNFTKVVQRIPVRIRVDQDSPLAG 324

Query: 402 NIELRNGFPAEVLFTAKN 419
             +LR G    V    ++
Sbjct: 325 --QLRPGLSVVVKVDTRD 340


>gi|126657308|ref|ZP_01728467.1| hypothetical protein CY0110_00075 [Cyanothece sp. CCY0110]
 gi|126621295|gb|EAZ92007.1| hypothetical protein CY0110_00075 [Cyanothece sp. CCY0110]
          Length = 515

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/375 (12%), Positives = 126/375 (33%), Gaps = 32/375 (8%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V   G++        + S  SG ++K  V+ G  I  G  +   +D +        K+++
Sbjct: 89  VRLLGQVE-AGAKATLSSQVSGTVEKILVKEGDSITSGMIVAILDDAD-------GKIAL 140

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN--YGISSVY 161
              +  +  E+S L+ L  +     +    R+ +L     +       +         + 
Sbjct: 141 AEAQARLVQEQSNLERL--EVGTRSEIIAQRKAELTSAQAREQEARDNLERLIALQPDLI 198

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
              + +L   RS      D   +   L    +  ++ L   +   ++   ++N   + E 
Sbjct: 199 AQGQAELESARSREKEAQDNLQRIKGLSLEGALSERALVEAEARADE---TRNQRLRAEA 255

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-ISRDLEQNQRTFADEMSKL 280
            +       R++I + +  L +       A    A         +++  +       + +
Sbjct: 256 ALKAEETSTRQDIAQAQTRLDNAKSDRLRATAILAEAQAGPTQEEIDAQRGVVNAAQAAV 315

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              +   E+  I + ++G +   Q+    +Y + + P++ +V   +   I  ++      
Sbjct: 316 EQAKLRLERTKIRASVSGVVQSRQAD-PGDYVEVNDPILSLV-SDRSLDIFLEIPESLSG 373

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            + +G    +        R       + +I  ++   ++N + Q    V + ++     +
Sbjct: 374 QISEGMQVNL------FARALPNWEKLTQITAVVPSANSNSRRQ---LVRVSLS-----N 419

Query: 401 NNIELRNGFPAEVLF 415
              +L  G   +   
Sbjct: 420 PPQKLLPGMAIQADL 434


>gi|240127517|ref|ZP_04740178.1| putative secretion protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 311

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/315 (14%), Positives = 99/315 (31%), Gaps = 20/315 (6%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSV-YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +Q L        T ++     +  +     +     +  +   +L +  +    +  +  
Sbjct: 2   QQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLHILQQIDGQKRRIRL 61

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++ L   + L   +AVS+ +    E  + +   +L     E+  +L+ I       NL 
Sbjct: 62  AEEMLRKYRFLSANDAVSKQETMNVEAELLEQKAKLDAYRREEAGLLQEIRTQ----NLT 117

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A+  K    +  Q +RT AD   ++   E  R ++ I +  +G I    +         
Sbjct: 118 LASLPKRHETEQSQLERTIADISQEVLDFE-MRSEQIIRAGRSGYI-AIPNVEVGRQVDP 175

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           S+  + IVP     Y    +       +K      +R+  Y   +       +  +    
Sbjct: 176 SKLFLSIVPERTELYTHLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVAKTA 235

Query: 375 SQQDN-----------NLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTT 421
             +                 +  Y V +K      +       L+ G   E     +   
Sbjct: 236 LGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHEKRR 295

Query: 422 LAQEIIHPITDNWPK 436
           L + ++ PI     +
Sbjct: 296 LYEWVLEPIYSMSGR 310


>gi|209518427|ref|ZP_03267250.1| secretion protein HlyD family protein [Burkholderia sp. H160]
 gi|209501148|gb|EEA01181.1| secretion protein HlyD family protein [Burkholderia sp. H160]
          Length = 378

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/433 (11%), Positives = 118/433 (27%), Gaps = 97/433 (22%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDN------ 55
           H        RN    +  +  L+++ +IG   W+    +       G  +   +      
Sbjct: 13  HGEAQSAQTRNAKRFI--LVGLALVALIGGALWAGHWWL------VGRFIESTDDAYLQA 64

Query: 56  -VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V +    SG +    V +   +  G PL+  +               +  +  +D   
Sbjct: 65  DSVTVAPKVSGYVTDVFVADNQAVKVGDPLVRLDT--------------RQYQAALDQAS 110

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           + +D  N                                          ++    ++   
Sbjct: 111 ATIDARN----------------------------------------ADIQHAEAQLTQQ 130

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
             N      +  + R  L   Q ++     L    A + + L++ +    K+   +  + 
Sbjct: 131 RANIAQAVAQEEVARVDLRHAQDEVARYTPLAASGAETVDRLSELKSNRDKAQATVAADH 190

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++    I  L               +  L Q +       +     +   E   I S
Sbjct: 191 AAAESARSQIAAL---------------TAQLGQARAQLEAARASAAQSQLDLEHTVIKS 235

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
            IAG +  ++S       Q    ++ +VP     Y+ A     QI  ++ G    +    
Sbjct: 236 SIAGRV-GDRSVRVGQLVQPGTRMLSVVPVQDT-YLTANFKETQIGRMRVGQPVEISVDA 293

Query: 355 YADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            +  +    + +++   P        +  +      T+    V ++I      +    L 
Sbjct: 294 LSGHK---LRGVVDSFSPGTGSQFALLPPENATGNFTKIVQRVPVRIHLETGPETRKVLL 350

Query: 407 NGFPAEVLFTAKN 419
            G         ++
Sbjct: 351 PGMSVTAEVDTRS 363


>gi|307150353|ref|YP_003885737.1| DevB family ABC exporter membrane fusion protein [Cyanothece sp.
           PCC 7822]
 gi|306980581|gb|ADN12462.1| ABC exporter membrane fusion protein, DevB family [Cyanothece sp.
           PCC 7822]
          Length = 428

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/393 (10%), Positives = 122/393 (31%), Gaps = 23/393 (5%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           +   P    V++ G +     VV I +P       + +  V+ G ++  G  +   +   
Sbjct: 47  AQAAPTLKKVAALGRLEPYSEVVSIAAPLNLDGDRVAQLLVKQGDRVKAGQIIAILDSRA 106

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           T +   L + + +         +        +    +      E Q    + +  +  ++
Sbjct: 107 TLENA-LAQATQQVKMAQAKLAQVKAGAKTGEIQAQQAQLARIEAQKRSEIQEQQANIAR 165

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +       +     +  +    +     ++E++   L     +    +   K+L      
Sbjct: 166 LEAEKAGEIQEQQAIITSLQAQLAN--AEIEDRRHQLLYQEGAISASVRDAKHLAF--LT 221

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLE 267
            Q +L + +    +      + + E +     I     +   +    L EI+     D++
Sbjct: 222 VQQELAEAKAAKERIENSKEQQLVEARAAFERIQTSRPQEIRQAQATLNEIAEVRPVDVQ 281

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI----VP 323
             Q    + ++     +   EQ  I +P+ G I   +  +     +    +  +    + 
Sbjct: 282 VAQTEVDNAIAAQLQAKTNLEQANIRAPMDGQI--LKIHT-----RPGAKIGDLGLLDMA 334

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            +      A+V    I  ++ G  A ++   +A   +     I  +++      +   + 
Sbjct: 335 QTDQMVAVAEVYQTDIGKIRLGQRAIIKSQAFAGQLQGTVSEIGLQVNRQNVFSNQPGEN 394

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   + +K+         +        EV+  
Sbjct: 395 LDRRVIEVKVRLNPLDSKRVSGLTNLQVEVVIQ 427


>gi|149005644|ref|ZP_01829383.1| BlpC ABC transporter [Streptococcus pneumoniae SP18-BS74]
 gi|307126741|ref|YP_003878772.1| BlpC ABC transporter [Streptococcus pneumoniae 670-6B]
 gi|147762584|gb|EDK69544.1| BlpC ABC transporter [Streptococcus pneumoniae SP18-BS74]
 gi|306483803|gb|ADM90672.1| BlpC ABC transporter [Streptococcus pneumoniae 670-6B]
 gi|332076968|gb|EGI87430.1| bacteriocin secretion accessory family protein [Streptococcus
           pneumoniae GA17545]
          Length = 453

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 68/440 (15%), Positives = 148/440 (33%), Gaps = 32/440 (7%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGII 67
            +R H  +   +  LS++    LI  S++   EI+V+S GEI     +  I+S   + I+
Sbjct: 13  QRRYHNYATVFIIPLSLLFTFILIF-SLVATKEITVTSQGEIAPTSVIASIQSTSDNPIL 71

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V N   + +G  L+ + +             ++ L    +        L    D+ 
Sbjct: 72  ANHLVAN-QVVEKGDLLIKYSETMEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLF 130

Query: 128 EKAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLN 177
               E        +  +Q  D       T ++V N     +S   +++ ++T+++     
Sbjct: 131 SSEDEFGYHNTFMNFTKQSHDIELGISKTNTEVSNQANLTNSSSSAIEQEITKVQQQIGE 190

Query: 178 RLDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTL 228
             +L +     RA L +     +++ + L      +Q        + +NQ    +  S  
Sbjct: 191 YQELRDAIINNRARLPTGNPHQSILNRYLIASQGQTQGTAEEPFLSQINQSIAGLESSIA 250

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E
Sbjct: 251 SLKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLE 310

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKG 345
             T+ +P  G +  N  F   N       + +I P    ++   I   V+   +  + KG
Sbjct: 311 NNTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKG 370

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            T  ++     +         ++ ID   ++ +     +      L   D         +
Sbjct: 371 QTVRLKLEKIGNHGT-TIIGQLQSIDQTPTRTEQGNLFKLTALAKLSNEDSKL------I 423

Query: 406 RNGFPAEVLFTAKNTTLAQE 425
           + G    V       T    
Sbjct: 424 QYGLQGRVTSVTTKKTYFDY 443


>gi|104781143|ref|YP_607641.1| multidrug efflux MFS membrane fusion protein [Pseudomonas
           entomophila L48]
 gi|95110130|emb|CAK14837.1| putative multidrug efflux MFS membrane fusion protein [Pseudomonas
           entomophila L48]
          Length = 378

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/367 (10%), Positives = 91/367 (24%), Gaps = 65/367 (17%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I +  SG + +  V + + +  G  L+  +  +  D +   +  +      +  ++    
Sbjct: 66  ISARVSGYVAEVAVADNATVKAGDLLVRLDPRDFHDRLRKAEARLAVSEAAVQVQRMR-- 123

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                                                        L              
Sbjct: 124 ---------------------------------------------LHTFAAEQDEQVQAI 138

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
              E +    R        D    + L E  A S   + Q      ++    R    E  
Sbjct: 139 ARAEAERGGSRGEAQRAAADWQRYQRLAEWQAASVQRMEQARATSIQAHALQRAADAELA 198

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                            A   +++  +L Q +       ++  +         I +P  G
Sbjct: 199 RQQAR--------KAVLAQQGRQLEAELVQREADLDQARAEAALARSALADTEIRAPFDG 250

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +V  +      Y     PL+ +VP ++   + A     Q+ H++ G   T+    +   
Sbjct: 251 -VVGQRKVRQQQYVTPGLPLLAVVPVAQAYVV-ANFKETQLAHLRPGQPVTLEVDTFGQH 308

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEY------YEVILKITDLAFSDNNIELRNGFPAE 412
                 ++      + +    +  T  +      + V + +   A       L  G    
Sbjct: 309 WRGTVDSLSPGSGAVFALLPPDNATGNFTKIVQRFPVRIHLDPPADDAPG--LLPGMSVI 366

Query: 413 VLFTAKN 419
                + 
Sbjct: 367 ATVDTRQ 373


>gi|27383069|ref|NP_774598.1| multidrug resistance efflux pump [Bradyrhizobium japonicum USDA
           110]
 gi|27356243|dbj|BAC53223.1| multidrug resistance efflux pump [Bradyrhizobium japonicum USDA
           110]
          Length = 446

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 57/377 (15%), Positives = 113/377 (29%), Gaps = 82/377 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +   I    SG + +  V +   +  G  L   +D +        +V++   R  + 
Sbjct: 107 VKADNTTIAPKVSGYLNRVLVADNEHVKAGQVLARIDDRDF-------RVALDQARADVQ 159

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                                                     N  I+S    L+++   +
Sbjct: 160 A----------------------------------------ANATIASKEAQLEVQQAVI 179

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           ++             + +A L+   +D     +L    + S  +  Q +  +  +   L 
Sbjct: 180 KAARAT-------LDVDQAALTFAAQDNKRYTDLAATGSGSVQNAQQAQSRIASAQATLE 232

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +     + L+ ++ L  E     A   +  +                    E      T
Sbjct: 233 RDTANLASALKQVDLLKAEIVQAKAAAARAEAVQ---------------HQAELNLGYTT 277

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           ++SPI G +V N+S     + Q    LM IVP      + A     Q+ HV+ G    + 
Sbjct: 278 VISPIDG-VVGNRSLRVGQFVQAGTQLMSIVPTDGAYVV-ANFKETQLTHVQAGQAVDIE 335

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNI 403
              +           ++ I P   Q+      +  T  + +V+    +KI   A     I
Sbjct: 336 VDMFPGQI---VHGRVDSIAPASGQEFALLPPDNATGNFTKVVQRIPVKIALDAAHGPAI 392

Query: 404 ELRNGFPAEVLFTAKNT 420
            LR G         ++T
Sbjct: 393 ALRPGMSVIPTIATRST 409


>gi|329964510|ref|ZP_08301564.1| hypothetical protein HMPREF9446_03169 [Bacteroides fluxus YIT
           12057]
 gi|328524910|gb|EGF51962.1| hypothetical protein HMPREF9446_03169 [Bacteroides fluxus YIT
           12057]
          Length = 436

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 53/425 (12%), Positives = 134/425 (31%), Gaps = 38/425 (8%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
               L  I+  +    W    P   ++++   +  E+    + S  +G +    VENGS 
Sbjct: 32  GITVLAVILLTVLAGCWIFRYP--DTLAAEVTLATEEPPAFVLSHATGKLDTLYVENGSS 89

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +     L    +   ++ +   K  +K         +  ++            F  R  Q
Sbjct: 90  VEADADLGVIGNAAESEDVRFLKGQMKVWEAQRYEPQEGVEL-----------FVGRHLQ 138

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L +    + +  + +  Y   + +  L     ++RS         +   L         K
Sbjct: 139 LGELQPAFAAFITSLTGY---ARFMELDYYARKLRSQEKRMGRQRSYLRLAEREYELTAK 195

Query: 198 DLTMMKNLFEKN---AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           D+ +  N++ ++    V +  +  +        L+        +  L        +    
Sbjct: 196 DIKLAGNMYARDSILYVRKAMITAEFEESASKYLQSLRAGESARMNLVQAEMQLVQHEEN 255

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVYNQSFSSSNYAQ 313
             +  K+   + ++++    + M +L       E    + SP++G + +   +  +   +
Sbjct: 256 LLDIRKQAYDEEQKHRIGLKNAMEQLLAQLGAWEHSYLLRSPVSGKVTFMTVWGRNRNVK 315

Query: 314 QSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             + +  I P      + +A +  +    V  G    +R  +Y D      K  ++ + P
Sbjct: 316 SGETVFVIQPSDSSGVLGKALLPLQGSGKVHTGQRVHIRLDNYPDQEFGYVKGRVKSVSP 375

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA------EVLFTAKNTTLAQEI 426
                      +  Y V + + D   ++    L    P              +  + + +
Sbjct: 376 -------APTEEGMYVVEISLPDGLRTNYGRLL----PVSRELKGTADIILADRNVLERL 424

Query: 427 IHPIT 431
           + P+ 
Sbjct: 425 LAPLR 429


>gi|225268112|ref|YP_002720030.1| accessory protein [Lactobacillus paracasei subsp. paracasei]
 gi|225183126|emb|CAR92202.1| accessory protein [Lactobacillus paracasei subsp. paracasei]
          Length = 362

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/329 (14%), Positives = 128/329 (38%), Gaps = 24/329 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + + +++ ++  + + +    E+++++SGE+      V ++S  +  I +  ++ G  + 
Sbjct: 24  LIVPAVMALVIALAFVLFAKREVTITTSGELTPVQKAVSVQSTTTSRIIENHLKEGRFVK 83

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE-SREEQL 138
           +G PL+T+ D+     + + +   K L+            L +  D   +       + L
Sbjct: 84  KGDPLVTYHDVNNPTQLKVLETQTKQLQDQTAALDKYKAGLTSNQDTFNQDDPFGYRQAL 143

Query: 139 LDFLGKYH--------------------STCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            D+L +                      +   ++    I+S  +++      + +I    
Sbjct: 144 QDYLSQRQIYALGSQQVSGQQSSENSKTAKVGQLLQQSIASSNQNIAAYQALLTAIQHQS 203

Query: 179 --LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              D +  S L ++ ++  +       +  + + +SQ D           +L+L++  +E
Sbjct: 204 GYNDSQPYSYLYKSFIAESKDMTGSDLDKVKTSYISQIDAKMDTEKSQLESLKLQQANNE 263

Query: 237 QKNM-LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
             +   + + E   +     A+ LK ++    Q  ++  +   K+ IL+      T+ +P
Sbjct: 264 ASDTSQQQLAENEQKMAALQASQLKSVADQKNQAAQSLTELNGKVAILKDQTSDVTVKAP 323

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            +GT+  + S    +Y      L +I P 
Sbjct: 324 TSGTLHIDASLQGKHYVPSGTTLAEIYPV 352


>gi|118480202|ref|YP_897353.1| periplasmic component of efflux system [Bacillus thuringiensis str.
           Al Hakam]
 gi|118419427|gb|ABK87846.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 352

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 103/265 (38%), Gaps = 4/265 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L++  P  +    L+  I +IG   W++   ++I    +  I N+++++  KS  +G++ 
Sbjct: 29  LEKKPPKFILLSLLVLFIFLIGFSIWALFGKVDIVSKGNASIQNKEDLIIYKSQINGVVS 88

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V++G  + +G  L+  E+ + ++  +  + ++KN     +  KS L+ L N   + +
Sbjct: 89  SVFVKSGDTVKKGDILIQLENQDLSNKKNELEAALKNF----EMNKSMLEQLKNSIKLNQ 144

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            +F    ++      K +    K        +      K   + SI      ++ +  + 
Sbjct: 145 DSFMDDIDKKFLEEYKAYEDGYKSLKLEKEDISSIEAYKSNAIVSINQRIQAIDQEHFIK 204

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L S  K   ++K    K+ V Q     Q+  +  +  EL   I E       I    
Sbjct: 205 KQELDSINKQSELLKIQANKDGVVQFSSAIQKGDLIDANEELVALIPEIDKKKVKIYLSA 264

Query: 249 DEANLEFANYLKEISRDLEQNQRTF 273
            E          + + +L+   +  
Sbjct: 265 QEIKGIRKGNQVQYAFNLKGADKQL 289



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 93/255 (36%), Gaps = 12/255 (4%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           I L   DL NK + L A L + + + +M++ L     ++Q+        + K  LE  + 
Sbjct: 105 IQLENQDLSNKKNELEAALKNFEMNKSMLEQLKNSIKLNQDSFMD---DIDKKFLEEYKA 161

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +    L+   E         +N +  I++ ++   +    +  +L  + K  E   I 
Sbjct: 162 YEDGYKSLKLEKEDISSIEAYKSNAIVSINQRIQAIDQEHFIKKQELDSINKQSELLKIQ 221

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +   G + ++ +    +    ++ L+ ++P      ++  ++ ++I+ ++KG        
Sbjct: 222 ANKDGVVQFSSAIQKGDLIDANEELVALIPEIDKKKVKIYLSAQEIKGIRKGNQVQ---Y 278

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            +      K    I  I        N  +     +  + I D        EL  G   + 
Sbjct: 279 AFNLKGADKQLGKITYISKYPIFDKNTKEYVYELDATINIKDTN------ELYTGMIGKA 332

Query: 414 LFTAKNTTLAQEIIH 428
                 +++ + I+ 
Sbjct: 333 AVITGESSVWEFILR 347


>gi|284052174|ref|ZP_06382384.1| hypothetical protein AplaP_11961 [Arthrospira platensis str.
           Paraca]
 gi|291568938|dbj|BAI91210.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 500

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 129/388 (33%), Gaps = 42/388 (10%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G IL       IKSP  G ++   V+ G ++ QG  L+T  +     ++  K++ I+  
Sbjct: 65  EGGILELGGQRSIKSPEDGAVENILVQVGDRVTQGQQLMTLRNPNQQTILQKKQLEIQKQ 124

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              ++  +  +     +    ++  +  + Q               +   ++S      +
Sbjct: 125 EITVERHRQEVAEAQEQLTASQRQLQIDQAQ---------------YQQELASQKTVQDL 169

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           K+ R+ S      +   K       L++ +++L   + L E+  V+Q ++ + E  V + 
Sbjct: 170 KIQRLESQVNRHRE---KVEEAEIELAAAEEELASSRELLERGFVAQQEIERGEESVRQQ 226

Query: 227 TLELRENIHEQKNMLRHINELYDEANL-----------EFANYLKEISRDLEQNQRTFAD 275
           T  LR   H+    L  +     E              E    L++    L Q+      
Sbjct: 227 TTALRNAKHDLNTTLMELASAKAELITVSTTVNTSPVVESEIRLRQAQSTLRQSLSELER 286

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +        +   I SPI G ++        +   +   L+ +   ++   +R +++
Sbjct: 287 LQIEYQEEALKLQNFVITSPINGVVLNINVR-EGDGLNRGHDLITLGDPNQE-IVRLQLS 344

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN---LQTQEYYEVILK 392
                 V++     VR        E  F   ++++D    Q + N      Q      +K
Sbjct: 345 TLNAVQVRQNQ--LVRVTEIGPNPE-VFTGRVDQVDLATRQSEGNQDSGSGQASVFATVK 401

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +           L  G P  V       
Sbjct: 402 LDRPT-----GRLIPGSPVSVEIVLNQR 424


>gi|325289781|ref|YP_004265962.1| efflux transporter, RND family, MFP subunit [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965182|gb|ADY55961.1| efflux transporter, RND family, MFP subunit [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 431

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 58/387 (14%), Positives = 124/387 (32%), Gaps = 89/387 (22%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V +SG ++   +   + S  SG ++   V+ G ++  G  LL  +               
Sbjct: 70  VPASGNVVAA-DREIVYSQASGTVENIHVKMGQKVTAGQALLDID--------------- 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                             ++D   K     +K+    ++     
Sbjct: 114 ----------------------------------IIDAEQKLAEARAKLAAANLAFSQAR 139

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
              + T + S      + EN            +  L   + L E+ AV+Q DL++ +  +
Sbjct: 140 SGDQTTALISARSALTEAEN-------TYKQDKDHLERTRILVEQGAVAQVDLDKAQADL 192

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             S                     YD+A   F    +     L+  Q        +L  +
Sbjct: 193 NNS------------------QAAYDQAQANFRQAEQNAPLQLQSLQANVESAGLQLEAI 234

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           EK    + +LSP  G ++     +  +       L+ I  +     I A +    +  +K
Sbjct: 235 EKQVAGRNLLSPCDGYVLSIAVNT-GDQIDDKTQLLTIG-NVAKLNIEADIPESGVGKIK 292

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G   ++    +    E+KF+  + ++   +  +  N Q   +  V++++      + + 
Sbjct: 293 NGQAVSISCNAFP---EEKFQGKVTQVGLEMVTKTKNNQQDTFLPVMVEV------EGDS 343

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            L  GF  ++     +    Q ++ PI
Sbjct: 344 RLLPGFKTDLEIVTAD---IQTLVVPI 367


>gi|239630233|ref|ZP_04673264.1| lactococcin A secretion protein lcnD [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|239527845|gb|EEQ66846.1| lactococcin A secretion protein lcnD [Lactobacillus paracasei
           subsp. paracasei 8700:2]
          Length = 465

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 60/431 (13%), Positives = 146/431 (33%), Gaps = 54/431 (12%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           + ++T + + P++ +V+  G      N +               + G  + +G  LL + 
Sbjct: 52  VTVLTAAEIAPVKTAVTVQGT---AANRIVTNHM----------KEGKHVKRGDTLLVYH 98

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D+     + + +  +  L+      K+ L+ LN      +  F S ++       + + +
Sbjct: 99  DVAHPAQLKVLEQQLATLKDQ----KAQLEVLNQSIAANKNLFASPDKFGYQQQVRDYLS 154

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             +V+     +++ +  +   + + I          S      +   Q  +   + L + 
Sbjct: 155 QRRVYELESEALHATQGVVDGKSKEIDQLLQTSMQASEAKMTAIREAQTAIRTDRPLSDN 214

Query: 209 NAVS-------------------------QNDLNQQERIVYKSTLELR-ENIHEQKNMLR 242
           +A +                         Q+ L        ++   LR + I++++  L 
Sbjct: 215 HAYNYLYLQYKAEAKNADAANLNSLKGQYQSQLQNLLTTEKETLASLRTQRINQKQADLS 274

Query: 243 HINELYDEANLEFAN--YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                 +EA L        + ++ +  + Q+   +  +KL  L+   +   + +  +G +
Sbjct: 275 AQQTGQNEAKLASLQSHMQQTMTAEQVKVQQGTQEGEAKLAALKDESKNYQVKASASGVL 334

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
               S S + Y      L +I+P     K   ++  V+P +I  +K+G +  +R      
Sbjct: 335 HLEASLSGNKYIPAGTVLAQILPDLATQKEAELKLAVSPAEIMSLKRGQSVRLRIAE--- 391

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                   +  +ID I      N +   Y++V  ++           L  G   +     
Sbjct: 392 -NVPSPMTLTGRIDAIDVAPTVNAKVGNYFKVQARVP--LSKQQRQTLHYGIAGQAAVIT 448

Query: 418 KNTTLAQEIIH 428
              T  Q  + 
Sbjct: 449 GTKTYWQYFVD 459


>gi|308205588|gb|ADO19061.1| secretion protein [Nostoc flagelliforme str. Sunitezuoqi]
          Length = 226

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 65/167 (38%), Gaps = 3/167 (1%)

Query: 17  LKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
             R  +++++ +    I W+ L  IE  V ++G++  E  V ++++P SG++K   V++G
Sbjct: 60  WSRTIMITLMALACFGIAWAYLAKIEQVVPATGQLKPEGTVKDVQAPVSGVVKTVNVKDG 119

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVS--IKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             +  G  LLTF+ I +   +D  K      N    I               +  +    
Sbjct: 120 QAVKPGDLLLTFDSIASVAELDSLKKIRVALNREHQIYRRLMGASTATESELLYLRGNLP 179

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +E   L          +++    + +      +     + + + + D
Sbjct: 180 QEAAFLLKSRAALVGENELLRTQLKNSGVGTALGSDEQQLLQVAKKD 226


>gi|16332185|ref|NP_442913.1| ABC transporter [Synechocystis sp. PCC 6803]
 gi|1653814|dbj|BAA18725.1| sll1481 [Synechocystis sp. PCC 6803]
          Length = 451

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/358 (12%), Positives = 117/358 (32%), Gaps = 45/358 (12%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIK----SPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +   P +  V++ G I     ++++     S     + +  V+ G ++ +G  +   +  
Sbjct: 57  ATQAPEDKPVAALGRIAPLGEIIKLSASPGSFGGAKVARVLVKEGDKVKEGQVVAVLDSY 116

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E                  +  ++S      +   +   A           + K  +   
Sbjct: 117 EQKAA------------AVVSAQESVRVAQADLAIIEAGAKRGEIAAQESQVRKAQAELE 164

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + F    +++   +       + +   +L+ +     L+A ++    D    ++L E  A
Sbjct: 165 QNFAVNQAALANLV-------KQLEGEKLEQQATIDRLQAEVNQAANDDRRYRSLAENGA 217

Query: 211 V--------------SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +              S   L + +  + K+   L E I EQ+++     +          
Sbjct: 218 IAMADWEQRRLNLETSNQRLREAQARLMKTEATLEEQIREQQSVRDKDAQTMVLERESAR 277

Query: 257 NYLKEISR----DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
             L +I+     D+++ +      M++        +   + +P+   ++   +       
Sbjct: 278 ATLSQIAEIRPVDVQKAKAELNLAMARFQEARAELDTALVRAPVDSQVLKIYTR-PGEKV 336

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  ++ +   +    + A+V    I  V+ G TA VR     D    + +  +  I
Sbjct: 337 SDTNGILDLG-ITSQMIVVAEVYENDIGRVELGQTAWVR--SENDSFSGELEGRVTNI 391


>gi|67922293|ref|ZP_00515806.1| Secretion protein HlyD [Crocosphaera watsonii WH 8501]
 gi|67855869|gb|EAM51115.1| Secretion protein HlyD [Crocosphaera watsonii WH 8501]
          Length = 439

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 94/329 (28%), Gaps = 46/329 (13%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +     V    S  +G IK+  V  G  + QG  L+  E  +    +     ++K   
Sbjct: 42  GTLEARQRVQLAPSRTNGRIKQILVREGDLVRQGQRLIEIEPQQQQQELVAATGNLKVAM 101

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +                                        KV               
Sbjct: 102 ADL----------------------------------------KVAEAEYRQRQAERDTA 121

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              + +   N    E     + A L   +K+    K L  +  V   +L++  + +  + 
Sbjct: 122 KADVETAKANLAKSEADVQEIEANLVLAKKEYERAKFLESEGVVPTQNLDEATQNLDNTQ 181

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L   I  +      +N   ++        +++   +++  Q        +      T 
Sbjct: 182 AQLESRIKTRDASQEALNASQNQLQA-AERQIEQALANIDSRQSAIVQAEGQQGSTAATL 240

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           +   +LSPI G I         +     + +  I   +++ Y+   +  +    ++KG  
Sbjct: 241 DYNFLLSPITGVIGEFNEKKIGDSVSVGEGITTIT-DNQVFYLNVNIPTENRNRLRKGLP 299

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQ 376
             +             +  I  I P++ Q
Sbjct: 300 VEL----INPDGSPGVRGQITYIAPLVDQ 324


>gi|251777877|ref|ZP_04820797.1| putative secretion protein HlyD family protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243082192|gb|EES48082.1| putative secretion protein HlyD family protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 352

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/384 (13%), Positives = 110/384 (28%), Gaps = 76/384 (19%)

Query: 41  EISVSSSGEILNEDNVVE----IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           E   ++   ++ + NV      I S   G IK+  V  G  + +G  L T +        
Sbjct: 32  EKIAAAESSLMVQANVSMDESNINSLTGGKIKEVSVNEGDIVKKGQVLATIDS------- 84

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
                                D +  +    E A E+   Q+        +  +K+    
Sbjct: 85  ---------------------DAILVQKQAAEAAIETITAQISSAEAGKRAAEAKLQETK 123

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
             +  + L                       L +     + +   +K L++         
Sbjct: 124 NGTREQQLNQ---------------------LESAYKLAEANYERVKALYDIGG------ 156

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +  +      L  +I++ +           E        + + +  +   Q      
Sbjct: 157 -ETQANLDAVKCNLDSSINQYELAKAGATA---ETIAAVQAQVDQATAGVAAAQGQLKQA 212

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + L  ++ +    T+ SP    +      S+ +      P+  I    +   I   +  
Sbjct: 213 QASLEQIKVSLGYTTLTSPTDSIVTKINV-SNGDMVSSGMPVAVITETVEP-SITCNIKE 270

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQDNNLQTQEY----YEVI 390
             +  V+      ++   Y D   K F   + +I+     + +       ++    Y V 
Sbjct: 271 TNLAKVELNQNVAIKLSAYGD---KVFNGKVVQINKNADFATKKATNDNGDFDILSYGVK 327

Query: 391 LKITDLAFSDNNIELRNGFPAEVL 414
           ++  D    +  I LR G  A V 
Sbjct: 328 VEFED--LDNTEINLRAGMTAFVD 349


>gi|189463843|ref|ZP_03012628.1| hypothetical protein BACINT_00176 [Bacteroides intestinalis DSM
           17393]
 gi|189438793|gb|EDV07778.1| hypothetical protein BACINT_00176 [Bacteroides intestinalis DSM
           17393]
          Length = 436

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 63/382 (16%), Positives = 131/382 (34%), Gaps = 44/382 (11%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR-CHIDTEKSALDFLNNK 123
           G I    V NG  +  G  L   ++   T+ +      +K+      +  K A  F+  +
Sbjct: 77  GKIDTLYVHNGDTVKAGEHLGVIQNASVTEDVLWLTDRMKDWEIAGYEPVKGAEYFIGKR 136

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             + E      + +   F+         +     +    + K++L   RS YLN ++ E+
Sbjct: 137 LQLGE-----LQSEYASFMIALSDYVRFIEQDYYAKKMDAGKIQLAGQRS-YLNLVEREH 190

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAV-------SQNDLNQQERIVYKSTLELRENIHE 236
             +     L+    D   +  L+ +NA+       S +   Q  R    S + L +   +
Sbjct: 191 TLTEKEMELAQSMYDRDSI--LYARNAMIVAEFEESGSRYLQSLRTRETSGMSLLQAEMQ 248

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            K    ++ +L  +A  E  N   E+   +EQ Q   +             +     SPI
Sbjct: 249 LKQQEENLLDLGKQAYDEEQNRRLELKNAIEQLQAQLSS----------WAQNYLFSSPI 298

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHY 355
              I +   +S +   Q  + +  + P      + +AK+  +    V+ G    +R  +Y
Sbjct: 299 CSKITFMTVWSRNQNVQSGETVFVVQPSEDSKVVGKAKLPLQGSGKVQVGQKVHIRMDNY 358

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP----- 410
            D      +  +E I P  ++          Y V + + +   ++    L    P     
Sbjct: 359 PDQEFGYVRGKVESISPAPTEDGL-------YVVEIVLPEGLHTNYGKTL----PTLREL 407

Query: 411 -AEVLFTAKNTTLAQEIIHPIT 431
                    +  + + ++ P+ 
Sbjct: 408 KGTADIILADRNVLERLLAPLR 429


>gi|254423407|ref|ZP_05037125.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
 gi|196190896|gb|EDX85860.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
          Length = 439

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 109/350 (31%), Gaps = 72/350 (20%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             + + +++SG +      V +    +GI++K  VE G ++  G  +   +  +    + 
Sbjct: 45  SELTVRITASGSVEPI-RTVNVSPKSAGIVEKLFVEQGDRVTAGQLIAQMDREQVEAQMI 103

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  +   R                                    +     +   +  I
Sbjct: 104 QNQAGVAEAR-----------------------------------AQLEDALNGASDTDI 128

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +    +L+    ++R                +A L   ++D    ++LFE+ AVS++ L 
Sbjct: 129 AQAEAALESARAQLREA--------------QARLELAEEDRDRTQSLFERGAVSRSAL- 173

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                      E R      + +   +NE       +      E    + Q +       
Sbjct: 174 ------DLDVSESRSAAATVEQLAARVNEAEQRLIDQQNGSDAEA---IAQAEARLLRAQ 224

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--------IVPHSKLTY 329
            +L  ++       I +P AG +   +  S   +   +    +        IV  +    
Sbjct: 225 GQLQGMQSQLADTNIRAPFAGIVTQ-RFASEGAFVTPTATASEVTSATSTAIVAIASGLE 283

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           + A+V    I  ++ G    ++   +     + F+  ++ I P   ++ N
Sbjct: 284 VIAEVPEADIGRIQVGQPVEIQADAF---LGEIFEGEVKLIAPEAIERRN 330


>gi|332185790|ref|ZP_08387537.1| hlyD secretion family protein [Sphingomonas sp. S17]
 gi|332014148|gb|EGI56206.1| hlyD secretion family protein [Sphingomonas sp. S17]
          Length = 398

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 92/292 (31%), Gaps = 28/292 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + LL    + +S  +      I     + +    ++R           +    ++  +  
Sbjct: 102 QPLLQIDTRDYSAQTAQIQAQIGVARANAEGVQAQIREQQAAIDRARAELRAAQSDAAFA 161

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q ++T    L    A S+  L+Q +    ++   +           R +  L        
Sbjct: 162 QAEVTRYTPLAASGAESRERLSQLQNQARQANARVASASAALAAAQRRVGTL-------- 213

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                  +  ++Q +       ++L   E       I + IAG +  N++     + Q  
Sbjct: 214 -------NAQVQQARSQGQAAKAQLDAAEVNLGSTLIRASIAGRV-GNKTVRVGQFVQAG 265

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--- 372
              M IVP     YI A     Q+  ++ G    +      D+   + K  +E + P   
Sbjct: 266 TRTMSIVPV-SQLYIEANFKETQLGLMRPGQPVKIEVDALPDV---EIKGHVESVAPGTG 321

Query: 373 -----IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                +  Q      T+    V ++I   A       L  G   EV+   ++
Sbjct: 322 AQFSLLPPQNATGNFTKIVQRVPVRIAVDADPQTRSLLVPGMSVEVVVDTRS 373



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/286 (9%), Positives = 80/286 (27%), Gaps = 7/286 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           ++     +  + + +I  I G+  ++    +   + S+ +   + + V +    SG + K
Sbjct: 30  QKKRRIRVILLVVAAIAIIGGVFWYARYKSVGQYMQSTNDAFIQADAVTVAPKVSGYVDK 89

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V     +  G PLL  +  + +      +  I   R + +  ++ +       D    
Sbjct: 90  VFVGENQDVKAGQPLLQIDTRDYSAQTAQIQAQIGVARANAEGVQAQIREQQAAID--RA 147

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             E R  Q      +   T         +     L     + R             +  +
Sbjct: 148 RAELRAAQSDAAFAQAEVTRYTPLAASGAESRERLSQLQNQARQANARVASASAALAAAQ 207

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS--TLELRENIHEQKNMLRHINEL 247
             + +    +   ++   +   ++  L+  E  +  +     +   +  +   +    + 
Sbjct: 208 RRVGTLNAQVQQARS---QGQAAKAQLDAAEVNLGSTLIRASIAGRVGNKTVRVGQFVQA 264

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                         I  + ++ Q         + I         I 
Sbjct: 265 GTRTMSIVPVSQLYIEANFKETQLGLMRPGQPVKIEVDALPDVEIK 310


>gi|307150873|ref|YP_003886257.1| DevB family ABC exporter membrane fusion protein [Cyanothece sp.
           PCC 7822]
 gi|306981101|gb|ADN12982.1| ABC exporter membrane fusion protein, DevB family [Cyanothece sp.
           PCC 7822]
          Length = 440

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/351 (13%), Positives = 121/351 (34%), Gaps = 46/351 (13%)

Query: 42  ISVSSSGEILNEDNVVEIK---SPFSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLID 97
            +V++ G I  +  V++I    +     + +  VE G  + +G  +   +++ +    + 
Sbjct: 60  SAVTALGRIEPQGEVIKIAPAPNMGGAKVVQLLVEEGDLVKKGQTIAILDNLPQEQAAVG 119

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + +  ++    ++D  K+       + +         + +L   +     T +++     
Sbjct: 120 VAQKEVEVALANLDIVKAGAK--QGEIEAQRATIARLQAELSGEIATNQVTIARL----- 172

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                          S+   + + +     L+A L   +KD    + L ++  +S +DL+
Sbjct: 173 -------------QASLAGEQEEQQATIERLQAELRDAEKDFQRYEKLAQEGVISDSDLD 219

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-------- 269
           ++   +  +  ++ E     K  +  +NE   E +      +  + + +++         
Sbjct: 220 ERSLKLATAREKVSEAKARLKKTVDTLNEQIKEQSSLSQKQVDTLQKQIDEAKATLERIA 279

Query: 270 ----------QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                     Q       + L   +   E   + +P+ G I+   S            + 
Sbjct: 280 EVRPVDVQKAQAEVDKANANLKKAQADLELAYVKAPLNGQILKIYSR-PGAKVDDKNGIA 338

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +I  ++    + A+V    I  VK G TA +      +   +K    I  I
Sbjct: 339 EIG-NTDQMIVIAEVYESDINKVKLGQTAFI--TSENNTFSQKLTGKIYHI 386


>gi|169796911|ref|YP_001714704.1| multidrug resistance secretion protein [Acinetobacter baumannii
           AYE]
 gi|184157179|ref|YP_001845518.1| multidrug resistance efflux pump [Acinetobacter baumannii ACICU]
 gi|213156686|ref|YP_002318347.1| RND family multidrug resistance secretion protein [Acinetobacter
           baumannii AB0057]
 gi|215484374|ref|YP_002326605.1| Multidrug resistance protein A [Acinetobacter baumannii AB307-0294]
 gi|260555799|ref|ZP_05828019.1| multidrug resistance secretion protein [Acinetobacter baumannii
           ATCC 19606]
 gi|301346247|ref|ZP_07226988.1| Multidrug resistance protein A [Acinetobacter baumannii AB056]
 gi|301513781|ref|ZP_07239018.1| Multidrug resistance protein A [Acinetobacter baumannii AB058]
 gi|301596948|ref|ZP_07241956.1| Multidrug resistance protein A [Acinetobacter baumannii AB059]
 gi|332852696|ref|ZP_08434330.1| efflux pump membrane protein [Acinetobacter baumannii 6013150]
 gi|332871101|ref|ZP_08439714.1| efflux pump membrane protein [Acinetobacter baumannii 6013113]
 gi|332874181|ref|ZP_08442104.1| efflux pump membrane protein [Acinetobacter baumannii 6014059]
 gi|88758878|emb|CAJ77828.1| RND family multidrug resistance secretion protein [Acinetobacter
           baumannii AYE]
 gi|169149838|emb|CAM87729.1| multidrug resistance secretion protein [Acinetobacter baumannii
           AYE]
 gi|183208773|gb|ACC56171.1| Multidrug resistance efflux pump [Acinetobacter baumannii ACICU]
 gi|193076652|gb|ABO11340.2| RND family multidrug resistance secretion protein [Acinetobacter
           baumannii ATCC 17978]
 gi|213055846|gb|ACJ40748.1| RND family multidrug resistance secretion protein [Acinetobacter
           baumannii AB0057]
 gi|213987267|gb|ACJ57566.1| Multidrug resistance protein A [Acinetobacter baumannii AB307-0294]
 gi|260410710|gb|EEX04008.1| multidrug resistance secretion protein [Acinetobacter baumannii
           ATCC 19606]
 gi|322507076|gb|ADX02530.1| RND family multidrug resistance secretion protein [Acinetobacter
           baumannii 1656-2]
 gi|323516943|gb|ADX91324.1| multidrug resistance efflux pump [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332729049|gb|EGJ60397.1| efflux pump membrane protein [Acinetobacter baumannii 6013150]
 gi|332731861|gb|EGJ63141.1| efflux pump membrane protein [Acinetobacter baumannii 6013113]
 gi|332737603|gb|EGJ68507.1| efflux pump membrane protein [Acinetobacter baumannii 6014059]
          Length = 383

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 56/371 (15%), Positives = 113/371 (30%), Gaps = 65/371 (17%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           +I S  SG + +  V++   + +G  L+  +D +    +   +  +   +       +  
Sbjct: 68  QITSMVSGQVAQVLVKDTQTVHRGDVLVRIDDRDAKIALAQAEAELAKAKRQYKQTAANS 127

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             LN++  V      S + Q+      Y     ++                         
Sbjct: 128 SSLNSQVVVRADEINSAKAQVAQAQADYDKAALELNRRA--------------------- 166

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIH 235
                                      L    AVS+ +L + +  V   K+ LEL +   
Sbjct: 167 --------------------------QLAASGAVSKEELTKAQSAVETAKAGLELAKAGL 200

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            Q    R   E    AN      + E S              + +   +   E+  I +P
Sbjct: 201 AQATSSRKAAESTLAANEALIQGVSETST------PDVQVAQAHVEQAQLDLERTVIRAP 254

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G I   ++            +M IVP +   Y+ A     Q++ V+ G   T+    Y
Sbjct: 255 VDGVITR-RNIQVGQRVAPGTSMMMIVPLND-LYVDANFKESQLKKVRPGQPVTLTSDLY 312

Query: 356 AD-----IREKKFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRN 407
            D      +   F         +I  Q+      +  +   V + +     +++ + +  
Sbjct: 313 GDDVEYHGKVVGFSGGTGSAFALIPAQNATGNWIKVVQRLPVRIALDPKELAEHPLRVGL 372

Query: 408 GFPAEVLFTAK 418
              A+V  +AK
Sbjct: 373 SMEAKVDLSAK 383


>gi|60679607|ref|YP_209751.1| hypothetical protein BF0010 [Bacteroides fragilis NCTC 9343]
 gi|60491041|emb|CAH05789.1| putative exported protein [Bacteroides fragilis NCTC 9343]
          Length = 411

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 101/288 (35%), Gaps = 17/288 (5%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              ++    I S  R    +  ++ S      +  N+  L + +L + Q  L+    L  
Sbjct: 126 QYERLLTSDIYSTMRQKLQQ--QIISDEAVIANFNNELRLKKQILDNSQNQLSKDSILLS 183

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
              +S+ +  Q+    + + L L+E+    ++  +          LE      E +   E
Sbjct: 184 MKGISEQEYQQK----FSTHLSLKESQLNLQSNRQMKQSEISRNQLEIQRICLEETEAKE 239

Query: 268 QNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           +    +    ++L+   K  ++  +  +P+ G + Y   + ++ + Q  Q L  I+P   
Sbjct: 240 KAYSDYITRKNELSNAIKLWKEHYLQYAPVEGELEYLGFWRNNRFVQSGQELFSIIPDKT 299

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
                  +       V+ G T  V+  +Y        K +++ +  I ++        + 
Sbjct: 300 NILGEVVIPSFGAGKVEVGQTVNVKMDNYPYDEYGLLKGVVKSVSRITNKIKTQNGDMDT 359

Query: 387 YEVILKITDLAFSDNNIELRN------GFPAEVLFTAKNTTLAQEIIH 428
           Y VI+   D   ++   ++        G    V    K   L + +  
Sbjct: 360 YLVIISFPDGTLTNFG-KILPLDFETKG---TVEIITKRKRLIERLFD 403


>gi|238785699|ref|ZP_04629674.1| type I secretion protein [Yersinia bercovieri ATCC 43970]
 gi|238713384|gb|EEQ05421.1| type I secretion protein [Yersinia bercovieri ATCC 43970]
          Length = 95

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 4/85 (4%)

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF---SDNNIEL 405
           TV+   Y        + ++E + P   Q +   + Q YY + +          +  +  +
Sbjct: 2   TVKIAAYDSSIYGNLEGVLETVSPDTLQDEV-KRDQFYYRIYVHTDRAELMNKAGKSFPI 60

Query: 406 RNGFPAEVLFTAKNTTLAQEIIHPI 430
             G  A V       T+   +I P+
Sbjct: 61  LPGMVASVEIKTGQKTVLDYLIKPL 85


>gi|157825454|ref|YP_001493174.1| multidrug resistance protein A [Rickettsia akari str. Hartford]
 gi|157799412|gb|ABV74666.1| Multidrug resistance protein A [Rickettsia akari str. Hartford]
          Length = 350

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 57/418 (13%), Positives = 128/418 (30%), Gaps = 88/418 (21%)

Query: 11  RNHPASLKRMTLLSIIGIIG--LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           R+       +  L I   +G  +  W+     + +         + ++  + +  SG++ 
Sbjct: 14  RHPFTKYVTIIALIIFIYLGYRIYVWANTQSTDNAYI-------DADISNVSAEVSGVVT 66

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K  V + +++ +G  +   +D              ++ +  +   +++++      +++E
Sbjct: 67  KLFVTDNTKVNKGDLIAEIDD--------------RDYKAKLAALEASIEACIKNIEIIE 112

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                                 + T +  I L +     K  L 
Sbjct: 113 --------------------------------------QKTSIGQIRLEQA--AEKLKLT 132

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +        D T ++ L +    S   LN  +    K+  + ++   +     +H+  L 
Sbjct: 133 KISFDIVSTDFTRVQELNKAKFASSKTLNDSKNAYQKAKTDYKQAQLDLDISKQHLQLLE 192

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E  +E               Q    +      +  ++ +   +++ + G I  N S   
Sbjct: 193 LEKAVE---------------QEKLKELTENKKVTLRSLQNTKLIAMVPG-IFGNSSLEV 236

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            NY    + L  IV      YI+A     QI+  K G    + F              I 
Sbjct: 237 GNYIVPGRVLFSIV-QDDTMYIQANFKETQIKKFKSGMKVKIEFDALPKKI---IDGKIR 292

Query: 369 KIDPIISQQ----DNNLQTQEYYEVILKITD-LAFSDNNIELRNGFPAEVLFTAKNTT 421
            I P    +      +  T  + +++ ++   + F   N  L  G  A V       T
Sbjct: 293 NIAPATGSKFSLIPPDNATGNFTKIVQRVPVLIDFESPNANLVPGMSAMVSIRTDQKT 350


>gi|257454155|ref|ZP_05619427.1| AcrA protein [Enhydrobacter aerosaccus SK60]
 gi|257448442|gb|EEV23413.1| AcrA protein [Enhydrobacter aerosaccus SK60]
          Length = 418

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/367 (11%), Positives = 114/367 (31%), Gaps = 38/367 (10%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             +++ S  +G + +  V  G  + +GTPL+T     +++ +D +    +  +   +  K
Sbjct: 46  QNIDVASLRAGRVSQVLVHEGDLVEKGTPLVTL----SSEELDTQLQGAEAAKLQAEAAK 101

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +  +    +    EK  E    +    + +  +  +      +     +L       +  
Sbjct: 102 ARAEGAVTRAMGTEKRAEGGYARTQGGVNQADAVIAAK-KAQLQIALDNLNNTKALRKDD 160

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            ++  +L+ +    +A                     ++ ++   +    ++     E  
Sbjct: 161 LVSIAELQQREQAYQA---------------------AKAEVLAAQAAKAQAAAGGTEAQ 199

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                    I E         A  + +    +EQ Q       S++  ++  +    + +
Sbjct: 200 AGIAEAQSGIAEAKAAVAEAQAG-INQAQAGIEQAQAGINQAQSQINRVKSIQSDMYVRA 258

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P AG +   +     N       ++ +V  +   Y+   +       V+ G  A +    
Sbjct: 259 PQAGRV-EYRIVEVGNVIAPGSKVVTLVDPND-VYLEIFLPTDSSNQVQIGSPARIVLDG 316

Query: 355 YADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                +    A +  +         S +  N + +  Y V L +     S     L+ G 
Sbjct: 317 ----IKAVLPAKVSFVANQSQFTPKSVETKNEREKMMYRVKLSLDPQVASRYQTLLKGGM 372

Query: 410 PAEVLFT 416
            A+    
Sbjct: 373 TAQGYVQ 379


>gi|172035562|ref|YP_001802063.1| glycolipid ABC transporter membrane protein [Cyanothece sp. ATCC
           51142]
 gi|171697016|gb|ACB49997.1| ABC transporter membrane fusion protein, probable glycolipid
           exporter [Cyanothece sp. ATCC 51142]
          Length = 487

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/402 (13%), Positives = 138/402 (34%), Gaps = 68/402 (16%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEIS-------------------VSSSGEILNEDNVV 57
             R+  L+ +G++ L   ++   I I+                   +++ G +  +  ++
Sbjct: 65  RSRLLFLTAVGLLSLGVTAVYSSIFIARQSTSSTPQSQQQPSLPTRIAALGYLEPQGEII 124

Query: 58  EIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLIDLKKVSIKNLRCHIDTE 113
           E+ +P       +   QV+ G +I  G  +   ++       ++  K  +   + ++   
Sbjct: 125 EVSAPAFLEGARVMDLQVKRGDRIQAGQIIAILDNHHRLKASLEQAKTQVAVAQANLAKV 184

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++                 +++  +     ++  T +++   G  ++ RS    L     
Sbjct: 185 QAG----------------AKQGDIQAQNARFMGTKAEL--EGQIAMQRSTISNLES--Q 224

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ--------------- 218
           +   R   +     L+A L++   +      L++  AVS  + ++               
Sbjct: 225 LLGERSAQQASIERLKAELANKTTECQRYATLYDSGAVSAQERDRVCLEQEITEQQLREA 284

Query: 219 ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
               +RIV     ++R         +  ++    E         +    DL+  Q     
Sbjct: 285 QANLQRIVNTLQDQIRAAKANLSRTIATLDTQIAENQARLNAVAEVRPVDLQVAQSELLA 344

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             + +   E   +   + +P  G I   +  +      Q+Q ++ +   +   Y+ A+V 
Sbjct: 345 AEAAVKQAEANLDLSYVKAPRDGQI--LEVHTWPGEIVQNQGIVALG-ETAQMYVTAEVY 401

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
              I  V+KG   T+      D   ++ +  +E++   + +Q
Sbjct: 402 ESDITRVQKGQPVTIT----TDGITEELQGTVEEVGLQVDRQ 439


>gi|331268911|ref|YP_004395403.1| HlyD family secretion protein [Clostridium botulinum BKT015925]
 gi|329125461|gb|AEB75406.1| HlyD family secretion protein, putative [Clostridium botulinum
           BKT015925]
          Length = 471

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/380 (11%), Positives = 109/380 (28%), Gaps = 57/380 (15%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V+ G  +  G  +   +  +    +D  +  ++     +          + + 
Sbjct: 53  GKIAELNVKEGDYVSAGQVIGRLDSKDYNFAVDGARGQLEAANGQVAAANGQTAAASGQA 112

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  +   ++ ++Q+             +    + +        L   +   +NR  L  K
Sbjct: 113 EAAKGQMQAAQKQIA------------MAQAKVDAAKAQYDKALNGAQKEDINRARLAVK 160

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL--NQQERIVYK----------STLELRE 232
           ++      +  Q+    ++ L+ +  VS+  L   + +R   K          +  E   
Sbjct: 161 NA--EDTYNYAQQSYERIEKLYAEGIVSKQQLDDIKIKRDSAKVDLDNKKELLTKAENGA 218

Query: 233 NIHEQKNMLRHINELYDEANLEFANY-------------LKEISRDLEQNQRTFADEMSK 279
              +++  L   N    +     A Y                        Q       ++
Sbjct: 219 RDEDKQAALAGYNAAKAQLEAARAQYGAAQGQYNAALGQKNAAQGQSSAAQGMRNSAQTQ 278

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
               +   +   + + ++G +V      S        P++ I   +    I  +V    I
Sbjct: 279 YESKQSMLDDTNLRASVSGYVVKVL-NKSGENVAAGYPVVVI--RTDDQVIDIQVAQNDI 335

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           + +K      +      DI+       I +I+ +   +         Y+  +++      
Sbjct: 336 EKIKVDTKTDISI---NDIKT---TGSIVEIEQVPDPKSRT------YKAKIRMDKQVPK 383

Query: 400 DNNIELRNGFPAEVLFTAKN 419
           D       G  A V      
Sbjct: 384 DK---FYVGTVANVSIKLAE 400


>gi|147679121|ref|YP_001213336.1| hypothetical protein PTH_2786 [Pelotomaculum thermopropionicum SI]
 gi|146275218|dbj|BAF60967.1| hypothetical membrane protein [Pelotomaculum thermopropionicum SI]
          Length = 402

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 89/268 (33%), Gaps = 42/268 (15%)

Query: 154 NYGISSVYRSLKMKLTRMR--SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
              ++++      +L + R   +   +   E   +   A   + + D    K L E   +
Sbjct: 99  AAELAALVDLYAAQLDKARNSDLPAQKTQAELALANAEAAYKTARADYERSKQLREAGVI 158

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           SQ    Q E++  ++    +        ++          N      +++    L + Q 
Sbjct: 159 SQQQFEQAEKMYTQAEAAFKAAQESLDILV----------NATIPQTIRQFEAQLRKAQA 208

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
            +A                 I +P+ G +           A   QP++ IV       ++
Sbjct: 209 DYA--------------NSIIRAPVGGVVTARNVN-PGEMASPGQPVVTIVALD-PLVVQ 252

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A VT  QI ++K G    VR      +R++ F  I+  I    +           Y V +
Sbjct: 253 ADVTEDQINYIKVGQELKVRVSS---VRDEPFTGIVTNISLAANPSTKA------YPVKI 303

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +I++         L+ G  AEV    K 
Sbjct: 304 QISNPEHV-----LKPGMFAEVFLNTKE 326



 Score = 43.1 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 49/165 (29%), Gaps = 2/165 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +      +G++    +   +    +G +    VE GSQ+ +G  L++ +  E   L+D
Sbjct: 49  GKLTGGTVVTGKLEALHSANVV-PKMAGKVASITVEVGSQVAEGDLLVSLDAAELAALVD 107

Query: 98  LKKVSIKNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           L    +   R   +  +K+  +      +   K   +  E+          +  +     
Sbjct: 108 LYAAQLDKARNSDLPAQKTQAELALANAEAAYKTARADYERSKQLREAGVISQQQFEQAE 167

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                     K  +     L    +        A L   Q D   
Sbjct: 168 KMYTQAEAAFKAAQESLDILVNATIPQTIRQFEAQLRKAQADYAN 212


>gi|150024601|ref|YP_001295427.1| membrane fusion efflux protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771142|emb|CAL42609.1| Probable membrane fusion efflux protein [Flavobacterium
           psychrophilum JIP02/86]
          Length = 359

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/374 (12%), Positives = 109/374 (29%), Gaps = 70/374 (18%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E N+  I    SG I K  V++   + +G  L T ++ + +  I+  K ++         
Sbjct: 44  EKNMNPIIPRVSGYITKVYVKDNQSVKKGDTLFTIDNRDYSIKIEEAKAALIGAE----- 98

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                                                      G +     +      + 
Sbjct: 99  ------------------------------------------QGYAVSKADIGTAQANVS 116

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               N           +  L+    D     NL++ +++++    Q E    ++  +LR 
Sbjct: 117 VSDANVQSASGNIETAKIRLNRASNDYERYNNLYKNHSITKQQFEQAEATKLEAQSQLR- 175

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            I +++       +    +    ++   E++              + L   +       +
Sbjct: 176 -ILQEQQKASTYQKTVASSRSNVSSKQAEVAA------ANIKRAQAILESAKLNLNYTVV 228

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            + I G +          + Q  Q L  I+ +++  ++ A     Q+  + +G   TV+ 
Sbjct: 229 TASIDGQVSKIAI-QPGQFIQPGQSLFYII-NNQEVWVIANFKETQLSKMVEGQKVTVKV 286

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDNN 402
             + D     F   I    P    +      +  T  + +      V + +     +   
Sbjct: 287 DAFPDT---DFSGTITSFSPATGARFSILPPDNATGNFVKTIQRLPVKISLDATNEAAKI 343

Query: 403 IELRNGFPAEVLFT 416
             LR G  A+V   
Sbjct: 344 KLLRPGMNADVDVH 357


>gi|320160289|ref|YP_004173513.1| secretion protein HlyD family protein [Anaerolinea thermophila
           UNI-1]
 gi|319994142|dbj|BAJ62913.1| secretion protein HlyD family protein [Anaerolinea thermophila
           UNI-1]
          Length = 465

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 55/389 (14%), Positives = 118/389 (30%), Gaps = 39/389 (10%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
              +E     S  I     V  ++S       SG +++   E G  +  G  L       
Sbjct: 31  TAKLETGSI-SAVITTSGAVRPVRSADLTWQISGKVQEVHGEIGDTVQDGQELARL---- 85

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                 L +  +     ++  E+   D  + + ++ +   E  + Q  +   K       
Sbjct: 86  --AEDSLPQNVLLAWNDYLQAEEYLKDLQDTQPELAQAQMELAQAQ--EEYEKVEKRYRN 141

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-KNA 210
                 +    ++      +     N    +    L +   ++  +    +K L + + A
Sbjct: 142 FNPERRNVSQATIDTAKADLALAEKNLEMAQKYFDLFKGRDANDPERAEALKMLAKAQQA 201

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                 N        S  E ++   E       +    D+A  +     K +S       
Sbjct: 202 RDSAYFNYLYVTGKPSNTEAQKIQAELALAKSRL----DQAKKKVEELSKGVST------ 251

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  ++L   ++T +Q  + +P AG I   +     +       L   +      Y+
Sbjct: 252 LELTAAQARLRAAQQTLDQIVLKAPFAGIITNRRI-QPGDVVTAG-TLAFQMEDRSHLYV 309

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              ++  +I  +     AT+ F    +         + +I        NN Q    Y V 
Sbjct: 310 EVNISEIEINDIHLEQEATLTFDALPEKTY---HGRVVQIGL----SGNNQQGAVTYPVT 362

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           ++ITD      +  +++G  A V    + 
Sbjct: 363 IEITDA-----DENIKSGMTAMVQIETRK 386


>gi|320103864|ref|YP_004179455.1| RND family efflux transporter MFP subunit [Isosphaera pallida ATCC
           43644]
 gi|319751146|gb|ADV62906.1| efflux transporter, RND family, MFP subunit [Isosphaera pallida
           ATCC 43644]
          Length = 623

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 56/389 (14%), Positives = 127/389 (32%), Gaps = 66/389 (16%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ-VENGSQILQGTPLLTFEDIETTDLI 96
             +E+ V   G +    N +E+KS   G       V  G+++ +G  ++  +     D  
Sbjct: 68  GKLEVLVKEKGTLE-SANNIEVKSQVEGNPTIIWIVPEGTRVKKGEKIVELDSASLRD-- 124

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            L +  I   +     E++ L+    +  V+E                            
Sbjct: 125 SLLQQKINTDQAVSAYEQARLNREVAETSVVE---------------------------- 156

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                           +   N   LE + +L  + ++  +  +   + +  K  +S++ L
Sbjct: 157 ------------YEEGTYLQNLQSLEGEIALAESDVTRGKDRVEWTERMTRKGYLSRSQL 204

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             ++R +     +L+      + + ++      +   E  + ++    D    Q     E
Sbjct: 205 LAEQRSLDNYMFQLQNAKKRIEVLEKYTKPKMLK---ELQSNVERFKADEASKQSALLIE 261

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQ----------SFSSSNYAQQSQPLMKIVPHSK 326
             K   LE+  E  TI +P  G +VY              +     +Q Q ++++ P   
Sbjct: 262 RDKQKRLEEQIENCTIYAPGDGLVVYANETGGRGGQEVIIAEGVAVRQRQTIIRL-PDIN 320

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              +  K+    +  V+ G  A ++   + D        +++ + P+           + 
Sbjct: 321 NMRVNTKIHESMVARVRPGLRAEIQVDAFPDQ---PLAGVVDYVAPLPDPTGWLASDVKQ 377

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLF 415
           Y   +++           LR G  A+V  
Sbjct: 378 YTAYVRVNQADP-----RLRPGLSAQVKI 401


>gi|190894679|ref|YP_001984972.1| multidrug efflux transporter protein [Rhizobium etli CIAT 652]
 gi|190700340|gb|ACE94422.1| multidrug efflux transporter protein [Rhizobium etli CIAT 652]
          Length = 394

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 59/429 (13%), Positives = 126/429 (29%), Gaps = 87/429 (20%)

Query: 3   HFMWKNLKRNHPASLK--RMTLLSIIGIIGLITWSILLP----IEISVSSSGEILNEDNV 56
           H +   +    PA  +  R  LL    ++ +   +        +     ++ +   + + 
Sbjct: 34  HLVEPAVLSEPPARRRTGRGLLLGATAVVLIAATAYYGHNYWTVGRFEIATDDAYVKADN 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             +    SG I +  V + + +  G PL   +D              ++ R  +D  K+ 
Sbjct: 94  TTVAPKVSGYIAEVLVSDNAVVKAGQPLARIDD--------------RDFRAALDQTKA- 138

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                                                   +++   +L  K   +     
Sbjct: 139 ---------------------------------------DVAAAEATLNAKQASLDIQQS 159

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                     + +A  +  +++     NL            Q    +  +   +  +   
Sbjct: 160 TIAAARATVEVDKANETFAEQNNKRYANLATNGYAPVQTAQQAASTIAAAQATITRDTAA 219

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
               ++ +  L               + +L Q + T A + +     E      TI +P+
Sbjct: 220 LDAAVKQVELL---------------NAELAQARATLAHDQAVQHQAELNLSYATITAPV 264

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GTI  N++     Y Q    LM +VP S +  I A     Q+  V+ G    +    + 
Sbjct: 265 DGTI-GNRTLRIGQYVQAGTQLMSVVPTSAVYVI-ANYKETQLTDVRAGQPVDIEVDTFP 322

Query: 357 DIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSD---NNIELRNGF 409
                     ++ + P   Q+      +  T  + +V+ +I      D    N +LR G 
Sbjct: 323 GRTY---HGHVDSLAPASGQEFALLPPDNATGNFTKVVQRIPVKIVLDAEAANGDLRPGM 379

Query: 410 PAEVLFTAK 418
             +     K
Sbjct: 380 SVQPSIDTK 388


>gi|17230144|ref|NP_486692.1| hypothetical protein all2652 [Nostoc sp. PCC 7120]
 gi|17131745|dbj|BAB74351.1| all2652 [Nostoc sp. PCC 7120]
          Length = 396

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/330 (13%), Positives = 111/330 (33%), Gaps = 42/330 (12%)

Query: 43  SVSSSGEILNEDNVVE--IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +V + G+I  E  V++  + +     + +  V+ G  +     +   +       ID  +
Sbjct: 50  AVIALGQIEPEGEVIKLSVPNAQDSRVNQILVKEGDFVKTNQVIAILQG------IDQLE 103

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +++   ++   ++ L                    L    G+            I+ +
Sbjct: 104 ADLRDAEANVRLHEAEL--------------------LKVEQGEAKQGEMAAQRATIARL 143

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              LK + T+           +   +   A L   Q      ++L  + A+S  D +  +
Sbjct: 144 EAQLKAETTQK----------QAAINSAEATLQEAQLTYQRRQDLSTEGAISIADADTAK 193

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R +  +   L E   E +  +  +     +     A   +    D+  ++         +
Sbjct: 194 RELATAEATLMERQAELEKTITTLQAQITQEEATLAQLKEIRPVDVRISKVHLEKAKIAV 253

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              +   E   + +P AG I+   +         +Q +++I   +++  + A+V    I 
Sbjct: 254 IQRKAQLENAKVRAPSAGQILKINTR-IGEQVNTNQGIVEIAQTNQMFAV-AEVAETDID 311

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKI 370
            V++G  A +    Y      + K  +E+I
Sbjct: 312 KVRRGQKAIIS-SEYGGF-SGEIKGTVEQI 339


>gi|153011310|ref|YP_001372524.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563198|gb|ABS16695.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 383

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 102/310 (32%), Gaps = 14/310 (4%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            +L      +      R   LL    ++  T   +     +     +      + +    
Sbjct: 70  AYLRADTTPVSAEVGGRIVHLLVEDYQHVKTGQLLMQIDPTQYQAQVDQAGASVAAAQAA 129

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             + ++  +L + ++   +  L  +    E+     +      +  + +  +L   I + 
Sbjct: 130 IRNAQSNITLQQRVIEQAEAGLAALNADRERVVSEGHRQTSLTKDGWSTAQKLEAAIADV 189

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           K +   I E   E   E    L  ++   +Q Q   +++ + L + +   ++  I +P+ 
Sbjct: 190 KRIEAQIAEKQAEIAAER-QKLDVLATQSDQAQAELSNQQAALRLAQIDLDRTHITAPMD 248

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +V         Y +    L+ +VP     YI A     Q+   + G   +V    +  
Sbjct: 249 G-VVGVSGAREGQYVRAGSQLVSVVPV-SKLYIVANFKETQLAKFRPGQVVSVTVDTFP- 305

Query: 358 IREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGF 409
              K+ +  +E++ P    +      +  T  + +V     ++I      + +  LR G 
Sbjct: 306 --GKELRGYVERLSPATGSEFSLLPPDNATGNFTKVAQRVGVRIALEQNGELDELLRPGM 363

Query: 410 PAEVLFTAKN 419
                     
Sbjct: 364 SVVATVHTDQ 373



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 65/170 (38%), Gaps = 12/170 (7%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I    VE+   +  G  L+  +  +    +D    S+   +  I   +S +      
Sbjct: 84  GGRIVHLLVEDYQHVKTGQLLMQIDPTQYQAQVDQAGASVAAAQAAIRNAQSNIT----- 138

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             + ++  E  E  L           S+   +  +S+ +       ++ +   +   +E 
Sbjct: 139 --LQQRVIEQAEAGLAALNADRERVVSE--GHRQTSLTKDGWSTAQKLEAAIADVKRIEA 194

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           + +  +A +++ ++ L +   L  ++  +Q +L+ Q+  +  + ++L   
Sbjct: 195 QIAEKQAEIAAERQKLDV---LATQSDQAQAELSNQQAALRLAQIDLDRT 241


>gi|332204551|gb|EGJ18616.1| bacteriocin secretion accessory family protein [Streptococcus
           pneumoniae GA47901]
          Length = 453

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 64/439 (14%), Positives = 145/439 (33%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEIAPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +          +  ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMDESQKTALETQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNR 178
              E        +  +Q  D       T ++V N     +S   +++ ++T+++      
Sbjct: 132 GEDEFGYHNTFMNFTKQSHDIELGITKTNTEVSNQANLANSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQNDLNQ-QERIVYKSTLELRENIHE 236
            +L +     RA L +     +++ + L      +Q    +     + +S   L  +I  
Sbjct: 192 QELRDAIINNRARLPTGNPHQSILNRYLIASQGQTQGTAEEPFLSQINQSIASLESSIAS 251

Query: 237 QKNMLRHI-------NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            K     I       N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P  G +  N  F   N       + +I P    ++   I   V+   +  + KG 
Sbjct: 312 NTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLLLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGNHGT-TIIGQLQSIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTTKKTYFDY 443


>gi|332976682|gb|EGK13522.1| HlyD family secretion protein [Psychrobacter sp. 1501(2011)]
          Length = 454

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 89/275 (32%), Gaps = 19/275 (6%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM--KNLFEKNAVSQND 215
            +  + L+   + ++    NR   E    + +A + + + DL     + L  +  V +  
Sbjct: 168 RNFQQQLQQAESNIQVAVTNRAANEQDVQVSQAQIEAREADLHSAEARVLSAEQDVQRYQ 227

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA-NYLKEISRDLEQNQRTFA 274
             +   I   S  E+     +       + +    ANLE A    ++   +         
Sbjct: 228 DLEAMTIGAVSKAEVAHTQAQLAQAKAGVEQA--RANLEAAKQARQKTLSNHSSYDANIE 285

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           +  +     +   +   I +P +G +      +   Y      LM IVP        A  
Sbjct: 286 NAQAAAKQAKINLDNTFITAPESGQLSQLSVKN-GQYVTPGMQLMYIVPQGVWVI--ANF 342

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVI 390
              Q+ ++  G  AT++         K F   +  I P      +    N  T  Y +V 
Sbjct: 343 KETQVANIVIGDRATIQVDALG---GKTFTGRVSNISPATGSELTTGSANPATGNYIKVA 399

Query: 391 ----LKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
               ++I   A   +   LR G   E     K+ T
Sbjct: 400 QRIPVRIDLDANQPDLARLRPGMSVEADVDTKSHT 434



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 75/205 (36%), Gaps = 5/205 (2%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           + W   K+     +  + L+ I  ++ L  W  L P   +V  +     +     I    
Sbjct: 83  YSWSPKKKPLLHLIFLIALIVIGVLLILYAW-KLPPFTPTVQHTDNAFVKGRTTIISPQV 141

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V++ +++  G  L+  +D      +   + +I+    +    +  +     +
Sbjct: 142 SGYVTQVAVQDFAKVAAGDLLVKIDDRNFQQQLQQAESNIQVAVTNRAANEQDVQVSQAQ 201

Query: 124 YDVLEKAFESREEQLLDF---LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRL 179
            +  E    S E ++L     + +Y    +        +     + +L + ++ +   R 
Sbjct: 202 IEAREADLHSAEARVLSAEQDVQRYQDLEAMTIGAVSKAEVAHTQAQLAQAKAGVEQARA 261

Query: 180 DLENKSSLLRALLSSHQKDLTMMKN 204
           +LE      +  LS+H      ++N
Sbjct: 262 NLEAAKQARQKTLSNHSSYDANIEN 286


>gi|32474568|ref|NP_867562.1| hypothetical protein RB6978 [Rhodopirellula baltica SH 1]
 gi|32445107|emb|CAD75109.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 731

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 65/451 (14%), Positives = 140/451 (31%), Gaps = 90/451 (19%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWS-ILLP------------------IEI 42
           H     +  R     +  +  L +IG+ G   +   +                     + 
Sbjct: 150 HPASKADHPRTGGIMVGLLICLVLIGVGGYFGYQQYIAKQSTISADDLIVSEVVKEAFDH 209

Query: 43  SVSSSGEILNEDNVVEIKSPF--SGIIKKFQ--VENGSQILQGTPLLTFEDIETTDLIDL 98
           +V   GEI +  N   I       G        ++ GS++ +G  L+  +       +  
Sbjct: 210 TVVEQGEIESSSNTEIICQIESRGGSGTSILWVIDEGSRVRKGDKLVELDSSNLEVQLKE 269

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            ++ +     ++ T  +          ++E+A  +REE L             V+     
Sbjct: 270 NRIEVIVAEANVATASA----------MVEQAKIAREEYL-----------EGVYKTDEK 308

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           ++   + +    +R   L                      +   + L  K  V    L  
Sbjct: 309 AILSEIAVAEQELRKAQLA---------------------IGSTERLVAKGLVKSLQLEA 347

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  +  +  +L       K +    N    +  ++F + +      L   +    +E  
Sbjct: 348 DKFALANAQNQLESAQGRLKVLQ---NLTRRKMLVQFDSDIDAAEATLSAARSELLEEQQ 404

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSN-----YAQQS------QPLMKIVPHSKL 327
           +L  +E+  E   + +P  G +V+   +SS         +        Q ++++ P    
Sbjct: 405 ELAEVEQQIEVCVMYAPTDGVVVHANRYSSRGGNAEFVVEAGAQVRERQAIIEL-PDPTR 463

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +R KV   ++  +K+G  A +R     D+     K  + K++           + + Y
Sbjct: 464 MQVRCKVNESRVTLLKRGMPAKIRLDALPDV---VLKGRVTKVNRYAEPGSWFSSSVKEY 520

Query: 388 EVILKITDLAFSDNNIELRNGFPA--EVLFT 416
                 T +   D    +R G  A  EV   
Sbjct: 521 A-----TTIEIIDPPEIIRTGMTAAVEVFIQ 546


>gi|223936253|ref|ZP_03628166.1| secretion protein HlyD family protein [bacterium Ellin514]
 gi|223895115|gb|EEF61563.1| secretion protein HlyD family protein [bacterium Ellin514]
          Length = 416

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 65/422 (15%), Positives = 125/422 (29%), Gaps = 92/422 (21%)

Query: 7   KNLKRNHPASLKRMTLLSI-IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +  KR  P  +  +T++ + IG  G + W  +        ++       ++ +I S  SG
Sbjct: 71  EPRKRFSPKVIGVLTVVLLAIGFAGYLWWEHM----QGYVNTDNAYVTGHIHQISSRISG 126

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I +  V++   +  G  LL  +                                     
Sbjct: 127 TISEVLVDDNQSVTNGQVLLKLD------------------------------------- 149

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                   R+ ++     +     ++       +     + +L +             + 
Sbjct: 150 -------PRDNEVHLEQARTQVQQAEAQIAQNQAAADQAEAQLNQAS----------AQI 192

Query: 186 SLLRALLSSHQKDLTMMKNLFEKN--AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           S   A L     D    KNLF     A+SQ +L+  +     +   L+            
Sbjct: 193 SQAEAQLEKTSLDYQRAKNLFRDGMKAISQQELDAAKAAYDVAQGALKA---------AK 243

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            NE+  +A ++ A   + ++    QN        + L   E      TI  P +G I  +
Sbjct: 244 ANEVGSKAQVQSAKAAQSVALAKRQN------AEAALKDAELQLSYTTIPVPTSGRI-GH 296

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++       Q  Q L+ +      T++ A     Q+  +K G    V        R   F
Sbjct: 297 KTVEVGQRVQPGQALLAV--ADDQTWVVANFKETQLAKMKPGQKVEVELDALPHHR---F 351

Query: 364 KAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDNNIELRNGFPAEV 413
              +E   P    Q      +  T  + +      V +     +       +  G  AEV
Sbjct: 352 SGRVESFAPASGAQFALLPPDNATGNFTKIVQRVPVKVVFDPESIRGFESRIVPGLSAEV 411

Query: 414 LF 415
             
Sbjct: 412 DV 413


>gi|319406159|emb|CBI79796.1| multidrug resistance efflux pump VceA protein [Bartonella sp. AR
           15-3]
          Length = 362

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/378 (12%), Positives = 117/378 (30%), Gaps = 82/378 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + ++  I    SG I++  V+    + +G  L   +  +        +++++  + H+D
Sbjct: 53  VQGDIAAIAPKLSGYIEELSVKANQAVKKGDILFRLDSGDY-------QIALEQTKAHLD 105

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T++  L  ++                                                ++
Sbjct: 106 TQQKILMRID-----------------------------------------------AQI 118

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            + +    D + +     A+ ++ Q  L  +  L     VSQ++++  +    ++   + 
Sbjct: 119 VAAHSALDDAQAQKVAASAVATNAQLTLQRITELKTDRYVSQSNVDNAKSSYEQAIANVT 178

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               +      +I  L                    + +             ++  +   
Sbjct: 179 RTDAQIAAARANIQVL---------------EAQRHEVESQTKSLELTRDQAKRNLDSTI 223

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P  G I    +          Q L  +VP     YI A     Q+Q+++ G TA + 
Sbjct: 224 LRAPFDGIIGNLTAKKGDFVVN-GQRLAALVPIHS-LYIEANYKETQLQNIQSGQTAYIS 281

Query: 352 FPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNI 403
              +   ++  F+  +  I P          SQ      T+    + ++I+   ++  + 
Sbjct: 282 VDAF---KKDVFEGKVLSISPATGAVFSLLPSQNATGNFTKITQRIPIRISIPEYALKSG 338

Query: 404 ELRNGFPAEVLFTAKNTT 421
            ++ G    V    +  T
Sbjct: 339 RIKAGMSVTVTVDTRAKT 356


>gi|293376009|ref|ZP_06622266.1| efflux transporter, RND family, MFP subunit [Turicibacter sanguinis
           PC909]
 gi|292645365|gb|EFF63418.1| efflux transporter, RND family, MFP subunit [Turicibacter sanguinis
           PC909]
          Length = 519

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 134/367 (36%), Gaps = 37/367 (10%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD-------- 118
           I +  V+ G ++  G  + T  +    D ++     ++     + + K+           
Sbjct: 103 IGELFVKEGERVSIGDKIATISEKFINDKLEELNSQLERATATLVSTKNNKQVTVLNQNK 162

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK--MKLTRMRSIYL 176
              +K    +  +ES+   L++ + +     + V N  +  V R ++    L   R++  
Sbjct: 163 AWEDKVQGSKNQYESQRNSLVNNINQLTDKLNDV-NKKLEDVRRQIEEMQNLATARNVDE 221

Query: 177 NRLDLENK----SSLLRALLSSHQKDLTMMK------NLFEKNAVSQNDLNQQERIVYKS 226
           N +  EN     ++LL+    + + D   ++       L E   +S+  L + E  +  +
Sbjct: 222 NHVLQENSTVEDTNLLQESNETKESDAEEIEAKLQELKLTESTLLSEKSLLETE--IKNT 279

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     E+        +         A    E+   +   Q+       ++  + K 
Sbjct: 280 NQSLNSLDVERTKEKESEVKEESANREINALTNSELDHSINNAQKEVDKINEQIAKVNKL 339

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           +E  T+ + I GTI+    ++  +      P++ I   +   +    VT ++I  +++G 
Sbjct: 340 KENSTLYAQIDGTILNLN-YTVGSTTSSEIPIVTIG-ENAKVFAEITVTQEEITKIEEGQ 397

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              +    Y D      +  +  I    + + N   +   Y V+++I++     N+++L 
Sbjct: 398 RVNLIVSAYQDQ---MLEGTVSFI----NLKPNGQGSSVNYSVMVEISE-----NDLKLL 445

Query: 407 NGFPAEV 413
            G     
Sbjct: 446 EGMTVSA 452


>gi|126640958|ref|YP_001083942.1| RND family multidrug resistance secretion protein [Acinetobacter
           baumannii ATCC 17978]
          Length = 362

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 56/371 (15%), Positives = 113/371 (30%), Gaps = 65/371 (17%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           +I S  SG + +  V++   + +G  L+  +D +    +   +  +   +       +  
Sbjct: 47  QITSMVSGQVAQVLVKDTQTVHRGDVLVRIDDRDAKIALAQAEAELAKAKRQYKQTAANS 106

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             LN++  V      S + Q+      Y     ++                         
Sbjct: 107 SSLNSQVVVRADEINSAKAQVAQAQADYDKAALELNRRA--------------------- 145

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIH 235
                                      L    AVS+ +L + +  V   K+ LEL +   
Sbjct: 146 --------------------------QLAASGAVSKEELTKAQSAVETAKAGLELAKAGL 179

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            Q    R   E    AN      + E S              + +   +   E+  I +P
Sbjct: 180 AQATSSRKAAESTLAANEALIQGVSETST------PDVQVAQAHVEQAQLDLERTVIRAP 233

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G I   ++            +M IVP +   Y+ A     Q++ V+ G   T+    Y
Sbjct: 234 VDGVITR-RNIQVGQRVAPGTSMMMIVPLND-LYVDANFKESQLKKVRPGQPVTLTSDLY 291

Query: 356 AD-----IREKKFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRN 407
            D      +   F         +I  Q+      +  +   V + +     +++ + +  
Sbjct: 292 GDDVEYHGKVVGFSGGTGSAFALIPAQNATGNWIKVVQRLPVRIALDPKELAEHPLRVGL 351

Query: 408 GFPAEVLFTAK 418
              A+V  +AK
Sbjct: 352 SMEAKVDLSAK 362


>gi|291568352|dbj|BAI90624.1| HlyD family secretion protein [Arthrospira platensis NIES-39]
          Length = 514

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 54/387 (13%), Positives = 119/387 (30%), Gaps = 59/387 (15%)

Query: 36  ILLPIEISVSS-----SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            + P+E++  +     +G +   D +  +       I++  V  G  + QG  +   +D 
Sbjct: 96  TVAPVEMTTVARTLDVTGTVEAYDLLPVLPQASGVQIQQVLVNQGEMVTQGQVMAVLDDS 155

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                ID     +++    +   ++ L          + +    E  L     +      
Sbjct: 156 VLRSQIDQANAQVESANSLVRQREANLGQAQAGLAQAQASLLEAESLLTQNQARLAEA-- 213

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                                                 +A L   ++++   ++L  +  
Sbjct: 214 --------------------------------------KANLDQARREVERYEDLSSQGV 235

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VS+ +L  +      +   +R       +    I+          AN       ++   +
Sbjct: 236 VSRQELETRITTAKTAEEGVRVAEANISSARATISSARANIGSAQANVES-AESNIRSAE 294

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  +++  LE  REQ  + +P++G +   Q  +       +Q L  I+       +
Sbjct: 295 AEVRSAQARVRQLETQREQTVVRAPMSGIV--AQRTARVGDVTGNQQLFSII-AENQLEL 351

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            AKV   Q+  V+ G   TV         +   + ++ +I P+I  Q           V 
Sbjct: 352 HAKVPETQLSQVRIGAAVTVTSDA-DQNLQ--VRGVVREIAPLIDPQSRQAT------VK 402

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTA 417
           + +  L    ++  LR G       T 
Sbjct: 403 IDLPPLGAIRDSF-LRPGMFLRAAITT 428


>gi|218437770|ref|YP_002376099.1| efflux transporter RND family, MFP subunit [Cyanothece sp. PCC
           7424]
 gi|218170498|gb|ACK69231.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           7424]
          Length = 479

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 49/360 (13%), Positives = 107/360 (29%), Gaps = 55/360 (15%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V+ G ++ QG  L   +D      +   K      R  +   +S +       
Sbjct: 91  GQLQELTVDVGDEVKQGEILARLDDKLLLSEVSQAKAQKAAQRSQVVQAQSQV------- 143

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                        N  +  V ++          I   +  L   
Sbjct: 144 -----------------------------NDALIRVEQARLELQQAQADITRLQASLNAT 174

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               R        D   ++ L ++ A+ +    Q E    ++   L       +  +   
Sbjct: 175 VEQARLEAQQTAADAARLRLLAQEGAIPEQQAEQAETEAKQAQQILLNQQASAEQQISQA 234

Query: 245 NELYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                 A     +   ++  + +Q    Q     +   +T  +  +    + SP+ G ++
Sbjct: 235 QTAAQTAAQILRSAEAQVKIEQQQVSTAQAQVEAQRELMTQAKTRQSYSILTSPVTGKVL 294

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +     N  Q    ++K+   S++  I  +V+  Q   +K G    V+   +      
Sbjct: 295 E-KVSEPGNLIQPGTEILKLGDFSRVKVI-VEVSELQRSKIKTGQRVDVKLDAFPQEN-- 350

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            F  I+ +I P                  L   ++  S+   ++ +G  A V F+    T
Sbjct: 351 -FLGIVTRISPAADPT-----------ARLIPVEITISNPEGKIGSGLLARVSFSQGEQT 398


>gi|255617558|ref|XP_002539854.1| Microcin H47 secretion protein mchE, putative [Ricinus communis]
 gi|223501723|gb|EEF22529.1| Microcin H47 secretion protein mchE, putative [Ricinus communis]
          Length = 291

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 99/296 (33%), Gaps = 23/296 (7%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +  + +S    L + +++   R D+E++   ++A     ++ +   +NL +   +S 
Sbjct: 2   QLNLVDLEKSRLSLLAQEQNLQSLRADIEHQEKRVQA----DEQTVARYENLQKSGFLSD 57

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             +  ++  +    L L     +  N    +  L  +  L       +I+RD  Q  RT 
Sbjct: 58  LQVQDKKNELTDQRLRLVTMHTDLVNANAEVARL--KIELSSTPLRGKIARD--QLDRTI 113

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           ++  ++LT  ++      + +P  G I         N A    PL+ IVP +        
Sbjct: 114 SNLEAELTK-QQIGRLWKVTAPCDGLITAIAISKDQN-ATSGSPLISIVPSNSALQATLY 171

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI----------DPIISQQDNNLQT 383
              + +  ++      +R   +   +       +  I                  +   +
Sbjct: 172 APSRALGFIQPTQRVELRMDAFPFQKFGTVLGRVSSIADTPLNTQERSSATRLATSVEAS 231

Query: 384 QEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           +  Y + + +             LR G   E     +   L + ++ P+  +  + 
Sbjct: 232 EPVYTIRVDLDSQLLIAYGKAQRLRPGLQFEADVQLETRRLYEWLLEPLY-SLRRA 286


>gi|1708987|sp|Q10419|MESE_LEUME RecName: Full=Mesentericin Y105 secretion protein mesE
 gi|609085|emb|CAA57403.1| mesE [Leuconostoc mesenteroides]
          Length = 457

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 63/428 (14%), Positives = 148/428 (34%), Gaps = 41/428 (9%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           ++   RN P  +     L ++ I+     S+    EI V +SGEI+    + +I+S  + 
Sbjct: 13  YQRRYRNFPTLIIVPIFLLVVFIVLF---SLFAKREIVVKASGEIIPAKVLSDIQSTSNN 69

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL----- 120
            I   Q+     + +G  L+TF          L    I NL   I +  +    +     
Sbjct: 70  AIDSNQLAENKMVKKGDTLVTFTSGNEKISSQLLTQQINNLNNRIQSLDTYKHSIIDGRS 129

Query: 121 ------NNKYDVLEKAFESREEQLLDFLGKYHS---TCSKVFNYGISSVYRSLKMKLTRM 171
                    YD L   + ++ + L     + +S   T  +  N+ I  + +       ++
Sbjct: 130 EFGGTDQFGYDNLFNGYMAQVDTLTSEFNQQNSDKQTADQQANHQIDVLKQGQSKNNQQL 189

Query: 172 RSIYLNRLDLENKS----SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
            +       + + +    +  +++  ++   L   +   +K  V Q  L+  ++ + +  
Sbjct: 190 ANYQAILTSINSNTKPTNNPYQSIYDNYAAQLKSAQTTDDKEQVKQTALSSVQQQIDQLQ 249

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKE----ISRDLEQNQRTFADEMSKLTIL 283
                   +   + +           + A+  ++      +++   Q++  +  +K +  
Sbjct: 250 TTSSSYDSQIAGITKSGPLSQSSTLDKIADLKQQQLASAQKEINDQQQSLDELKAKQSSA 309

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQ 340
            +  +   I +P +G +      ++  Y  +   + +I P         +   V      
Sbjct: 310 NEDYQDTVIKAPESGILHLTSDKATIKYFPKGTTVTQIYPMLNKRTKLSVEYYVPTSNSV 369

Query: 341 HVKKGYTATVRFPHYADIREKK--FKAIIEKID--PIISQQDNNLQTQEYYEVILKITDL 396
            +K+G    +RF        K       I+ I   PII ++      + +Y+ I  I   
Sbjct: 370 GLKRGQ--NIRFVA-NQNVTKPLILTGTIKTISSAPIIIKE------ESFYKCIASINVN 420

Query: 397 AFSDNNIE 404
                 I+
Sbjct: 421 VREHEQIK 428


>gi|315578872|gb|EFU91063.1| bacteriocin secretion accessory protein [Enterococcus faecalis
           TX0630]
          Length = 455

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 56/442 (12%), Positives = 140/442 (31%), Gaps = 37/442 (8%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            + H    + +    I+ +     + +    EI + +  ++     V +++ P    IK 
Sbjct: 14  SQQHHTFYRWVLYPVILFLCLGGFFLVFAKKEIVIRTPAQLTA-QKVEKLQVPIEAKIKA 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             ++    + +G  L+TF+     +     +     +       +  +D L ++ ++ E 
Sbjct: 73  NNLKENQTVKKGELLVTFDTTSLQNEKTQIEQENTTIEQQKSAAQIFIDSLMSEQNLFET 132

Query: 130 AFE-SREEQLLDFLGKYHSTCSKVFNYGISSVYRSL--KMKLTRMRSIYLNRLDLENKSS 186
             +     Q+  FL +  +T   +    +++            ++   +  R   + +  
Sbjct: 133 EDDFGYSNQVKSFLAEKEATLYALKQSEVATQKEQETYDKAKEQLEKQFTMRQKEQRELE 192

Query: 187 LLR------ALLSSHQKDLTMMKNLFEKNA--VSQNDLNQQERIVYKSTLEL----RENI 234
            +R        L     ++T    L++     V +    Q +  +  +  EL    ++ I
Sbjct: 193 QVRTAWVDEQSLEGFSPEITSKYQLWKVQLTDVPEEQKKQVKATILATIDELITQKKKEI 252

Query: 235 HEQKNMLRHI---NELYDEANLEFANYLKEISRDLEQNQRTFADEMS-------KLTILE 284
            + +     +   + + +E N +     +     L   +   A+           L  + 
Sbjct: 253 EQLQAEQAKLVIPSTIENEINSQKEKGKQSKELALATAKEKVAELTETQKKNDIALKTIN 312

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHV 342
           +   Q  + +PI GTI  N    +     +   L ++ P          A +   +   V
Sbjct: 313 EQLTQSALKAPITGTIHLNAEVENQLEVPKGTTLAEVYPEHKKSELRFTALLPTSESMRV 372

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G     +      +  K     +++I     +         +Y +   +       +N
Sbjct: 373 KPGMDVHFKLDK-KGVATKTINGTLKEIS----ENSTTTDQGTFYTIKGILNPS----DN 423

Query: 403 IELRNGFPAEVLFTAKNTTLAQ 424
              R G   E+       T  Q
Sbjct: 424 FTSRYGLTGELSLIVGKKTYWQ 445


>gi|218680992|ref|ZP_03528889.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           etli CIAT 894]
          Length = 127

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 31/120 (25%), Gaps = 9/120 (7%)

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS-------QQDN 379
                  +  + I  V  G  A V+   Y   +       +  I                
Sbjct: 4   PLEAEVSINTRDIGRVAVGKEARVKLDAYPFQKYGTATGKVRTISEDTFLTGQQEQTATP 63

Query: 380 NLQTQEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           N     +++  + + D     SD  + L  G          N T+    ++P+       
Sbjct: 64  NQPAAPFFKARILLADTRLNASDVPVRLLPGMTVSTEIKVGNRTVISYFLYPLLRGLDNA 123


>gi|119509820|ref|ZP_01628964.1| hypothetical protein N9414_06984 [Nodularia spumigena CCY9414]
 gi|119465555|gb|EAW46448.1| hypothetical protein N9414_06984 [Nodularia spumigena CCY9414]
          Length = 397

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/344 (13%), Positives = 119/344 (34%), Gaps = 47/344 (13%)

Query: 38  LPIEISVSSSGEILNEDNVVEIK---SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
            P + +V++ G +  +  V+ +    S     + K  V  G  + QG  +   +   T  
Sbjct: 54  SPTKAAVAALGRLEPQGEVIRLSAANSQAGVRVAKLLVNQGDWVSQGQVVAILDSYYTR- 112

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
                                              A E  ++Q+L      +   +    
Sbjct: 113 ---------------------------------LAALEKAQKQVLVAEAVVNQVKAGAKA 139

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             IS+   ++     ++R     +   +   + L A L + + +    + L+++ A+S +
Sbjct: 140 GDISAQEATIARLEAQLRGETSAQ---QATIARLEAELRNAESENQRYQQLYQEGAISAS 196

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
               ++  V     +L E     K  +  + +   EA     +  +    D++  Q    
Sbjct: 197 SFETKQLRVDTVRQQLNEAEAAFKRTVETLQKQLKEAEARLESIAEVRPTDIQAAQTDVE 256

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
             ++ +   +   +  ++ SPI G +   +  +       +  + ++   ++  Y+ A+V
Sbjct: 257 SAIASVRQAQADWDLTSVRSPIDGQV--LKINTRPGEIISNAGIAELG-RTQQMYVVAEV 313

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
               IQ V+ G +A +    +      + +  +  I   +S+Q+
Sbjct: 314 YETDIQKVRLGQSAMITSNAF----TGELRGKVTDIGLQVSRQN 353


>gi|92118744|ref|YP_578473.1| secretion protein HlyD [Nitrobacter hamburgensis X14]
 gi|91801638|gb|ABE64013.1| secretion protein HlyD [Nitrobacter hamburgensis X14]
          Length = 385

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 50/375 (13%), Positives = 113/375 (30%), Gaps = 81/375 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +   I    SG I +  V +   +  G  L   +D              ++ R  +D
Sbjct: 61  VKADSTIIAPKVSGYIDRVLVSDNQPVKAGQVLARIDD--------------RDFRTALD 106

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              + +         L+     ++  +                                 
Sbjct: 107 QAHADVVAAEAAVSNLDAQIALQQPMIAQQTAD--------------------------- 139

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                         +   A L    ++      L +  + +     Q +  +++ T +L+
Sbjct: 140 -------------VAAAEAGLKFASEEQARYDGLMKTGSGTVQRAQQTDAALHEKTAQLQ 186

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                     + ++ L  E +   A   +  + + +                       T
Sbjct: 187 HGQSALLAAHKKVDVLTTERSKAVAQVARAHAVERQMALN---------------LSYTT 231

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P+ GT+   ++     Y     PLM +VP   +  + A     Q+ HV++G    VR
Sbjct: 232 ITAPVDGTV-GARALRVGQYVTAGTPLMAVVPLDAVYIV-ANFKETQLTHVRQGQPVDVR 289

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIE-- 404
              + D+R    K  ++ + P    +      +  T  + +++ ++   +   D+ +   
Sbjct: 290 IDSFHDVR---LKGHVDSLSPASGLEFALLPPDNATGNFTKIVQRVPVKIVLDDHRLAGL 346

Query: 405 LRNGFPAEVLFTAKN 419
           LR G  AE     K+
Sbjct: 347 LRPGMSAEPTVNTKS 361


>gi|296131804|ref|YP_003639051.1| biotin/lipoyl attachment domain-containing protein [Thermincola sp.
           JR]
 gi|296030382|gb|ADG81150.1| biotin/lipoyl attachment domain-containing protein [Thermincola
           potens JR]
          Length = 376

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 51/377 (13%), Positives = 103/377 (27%), Gaps = 34/377 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + R   A +    +++I  + G I  +  +  E  +  +G +  E   V+I S   G I 
Sbjct: 1   MNRKRVALISVALIITIGTLTGFIL-NRNVHAENGLVVTGTL--EGKEVDINSKIPGRIV 57

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K  V  G ++  G  L    D E        +  +   +  +D    A++          
Sbjct: 58  KLYVSEGQKVKTGQLLAKISDEELLAKKAQAQALVDAAKSQLDQANLAVELQRQVNQTNV 117

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                  +  +  L K  +           + Y        R+  +Y        K   +
Sbjct: 118 NKAMGAYQASVAQLKKARNGARTQEIAQAQASYDLWLKTSQRVHKLYAKGAVAAQKVDEV 177

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L   ++ L M K                           +E+I     M        
Sbjct: 178 DTQLKVAEETLKMAKE-----------------------GARKEDIEAAAAMAESAKASL 214

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           ++AN            ++   +  +   ++ L  +E   +   I +P AG +       +
Sbjct: 215 EQANAGLLQ-TSLAEMNVAAAKAKYEQALAGLKEVEAYLKDTEIKAPAAGEVSVIYV-EN 272

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                   P+  I       ++  KV    +  V       V  P         +   + 
Sbjct: 273 GELISTGMPIATIT-SDDSLWVEVKVRETDLDKVSLHQKVEVELP-----TGTTYPGEVA 326

Query: 369 KIDPIISQQDNNLQTQE 385
            I+            + 
Sbjct: 327 WINRKPDFAAKRATGER 343


>gi|113473746|ref|YP_718009.1| multidrug resistance protein VceA [Sphingomonas sp. KA1]
 gi|112821426|dbj|BAF03297.1| multidrug resistance protein VceA [Sphingomonas sp. KA1]
          Length = 388

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/372 (11%), Positives = 106/372 (28%), Gaps = 61/372 (16%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NV +I     G +++ +V++   + +G  L+  +D +                    
Sbjct: 68  VGANVAQITPLVGGPVREVRVDDTQMVKRGDILVKIDDTDAR------------------ 109

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                                                   +    +  ++ +      ++
Sbjct: 110 -----------------------------IALARAEAELALTERRVRGLHATGTGLDAQI 140

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +   ++   + + +  RA L   + DL   + L +  +VS  +L      +  +T  LR
Sbjct: 141 AARASDQARADAQLTSARADLDRARIDLQRREALAQSGSVSGEELTIARNALATATANLR 200

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +     +            AN +      +  N    A   ++        E+  
Sbjct: 201 AAEALRAQAASNRTAAIG---SRDANRVLIADTAIGDNPEVLAARAARDQARID-LERTV 256

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P+ G +   Q        Q    LM IVP     ++ A     Q+  VK G    + 
Sbjct: 257 LRAPVDGVVSRRQV-QIGQRVQPGAMLMVIVPIDAT-FVDANFKEVQLAKVKPGQPVKLH 314

Query: 352 FPHY--ADIREKKFKAIIE------KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
              Y    +   +             + P  +   N ++  +   V + +     + + +
Sbjct: 315 SDLYGKDVVYTGRVVGFSGGTGAAFAVVPAQNATGNWIKVVQRLPVRIALDPKELNKHPL 374

Query: 404 ELRNGFPAEVLF 415
            +     A++  
Sbjct: 375 RVGLSMTADIDI 386


>gi|304317971|ref|YP_003853116.1| secretion protein HlyD [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302779473|gb|ADL70032.1| secretion protein HlyD family protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 403

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 125/376 (33%), Gaps = 30/376 (7%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           + E+  V++ S   G I+  +V+ G  +  G  L   E  E  D     + +++  +   
Sbjct: 48  VVENQEVDVASKLPGRIETVKVKEGDTVKAGQVLAYMEIKELQDKEKQAEAAVEAAQAQY 107

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +  K         Y + +K  ++  +     L +  +  +KV N   S      K KL  
Sbjct: 108 NNAKDT-------YQLQQKVNDADIQAAQAALDQATAQYNKVKNGARSQEIEQAKAKLDE 160

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            ++          ++S L    ++ Q+ L  +K   +  A S +    +E +        
Sbjct: 161 AKAALDVAEKSYQRTSQLFEAGAASQQTLDEVK--AKYQAASDDVHYAEEALSLIQEGAQ 218

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            E+I      +        +A              ++  +       + L  ++   E  
Sbjct: 219 PEDIKAAAAAVEQAKAAIMKAEAGKLQTAI-AGDAVKMAEANLNAAKAALDEVKANIEDA 277

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-VPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           TI +P  G I   ++           P+  I  P     ++  KV   Q+  +K G    
Sbjct: 278 TIKAPCDGIIT-VKNVEEGEIVSAGTPIFTIQQPKDN--WVNVKVKETQVGKIKVGQKVK 334

Query: 350 VRFPHYADIREKKFKAIIEKI------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           V    +       F  ++E I          S  + + +    Y V +++       NN 
Sbjct: 335 VTSADFPKE---VFTGVVESINEKPDYAAQRSTNERDDKDIVAYNVKVRL-------NNE 384

Query: 404 ELRNGFPAEVLFTAKN 419
           +L+ G    V F+   
Sbjct: 385 KLKAGMSVTVDFSGSK 400


>gi|32470443|ref|NP_863266.1| EntD1071 [Enterococcus faecalis]
 gi|25990279|gb|AAN76340.1| EntD1071 [Enterococcus faecalis]
          Length = 455

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 58/443 (13%), Positives = 141/443 (31%), Gaps = 39/443 (8%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            + H    + +    I+ +     +      E+ + +  ++  +     ++ P    IK 
Sbjct: 14  SQQHHTFYRWVLYPVILFLCLGALFLAFAKKEVVIRTPAQLTAQKTEK-LQVPVEAKIKT 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             ++    + +G  L+TFE     +     +     +       ++ +D L N+ ++ E 
Sbjct: 73  NTLKENQTVKKGEELVTFETTPLQNEKKQLEQENTTIEEQKKAAQTFIDSLTNEQNLFET 132

Query: 130 AFE-SREEQLLDFLGKYHSTC-------------SKVFNYGISSVYRSLKMKLTRM---- 171
                   Q+  FL +  +T               + +N     + + L  +        
Sbjct: 133 EDSFGYSNQVKSFLAEKEATRYASKQSETNTQKEQEAYNKTKEQLEKQLTTRQKEQKEWE 192

Query: 172 --RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
             R+ ++N   LE  S+ + +   + Q  LT +    +K  +    L   +  + +   E
Sbjct: 193 QVRTAWINEQSLEGFSTEITSRYQAWQSQLTDV-PEEQKKQIKATTLATIDEQISQVKKE 251

Query: 230 LRENIHEQKNMLR------HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           + +   EQ  ++        ++   ++        L    + + +   T     + L  +
Sbjct: 252 IEQLQSEQSKLVAPTTSDNEVSSQTEKTKQTKELALATAKQKVVELTETQKKNETALKTI 311

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQH 341
            +   Q T+ +PI GT+  N+   +     +   L +I P          A +   +   
Sbjct: 312 NEQLAQSTLKAPITGTVHVNEEVKNQLEVPKGTTLAEIYPKSKDPQLTFTALIPTSESMR 371

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           +K G     +      +  K     + +I     +     +   +Y +   +        
Sbjct: 372 IKPGMAIHFKLDK-KGVATKTIDGTLTEIS----ENSTTTEQGAFYTIKGTLKP----PK 422

Query: 402 NIELRNGFPAEVLFTAKNTTLAQ 424
               R G   E+       T  Q
Sbjct: 423 EFTGRYGLTGELSLIVGKKTYWQ 445


>gi|119509900|ref|ZP_01629043.1| heterocyst specific ABC-transporter, membrane fusion protein DevB
           [Nodularia spumigena CCY9414]
 gi|119465509|gb|EAW46403.1| heterocyst specific ABC-transporter, membrane fusion protein DevB
           [Nodularia spumigena CCY9414]
          Length = 429

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 46/355 (12%), Positives = 121/355 (34%), Gaps = 35/355 (9%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           P+   +S+ G +  E  V+ + +P       I +  V+ G  +  G  +   +       
Sbjct: 52  PVTPKISALGRLEPETEVISLSAPLDLDGDRIAQILVQEGDTVKSGQVVAILD------- 104

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
               ++    L+     + +       +        ++++  +     +           
Sbjct: 105 -SRTRLQTAVLQAEKQVQVAKAKLAQVEAGAKTGEIQAQQAIIQRLQAQLQGDKIAQQEA 163

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS--- 212
                 +SL  +L +  +I      L N  +              +  +LF+   +S   
Sbjct: 164 IARIEAQSLGERLAQEATINKLSAQLNNAQAEYER-YQQLSSQGAISLSLFDSKRLSFDT 222

Query: 213 -QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLE 267
            +  L+Q + ++ +        + + +  L  IN   ++   E    L  I+     D+ 
Sbjct: 223 AKQQLSQAQAVLNQINSTASIELAQAQVTLTRINATGNKQISEAKATLNSIAEIRPVDIA 282

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI----VP 323
             +    + ++ L  ++   E  +I++PIAG I   +  +     +  + + +     + 
Sbjct: 283 AAKSEVENAIATLKQMQINLESTSIIAPIAGQI--LKIHT-----RVGEKISEAGIADLA 335

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            ++     A+V    I  VK G +A +    +      + +  +  I   +++Q+
Sbjct: 336 QTEQMIAVAQVYQTDISKVKLGQSAVITSQAFP----GELRGTVSHIGLQVNRQN 386


>gi|291294740|ref|YP_003506138.1| secretion protein HlyD family protein [Meiothermus ruber DSM 1279]
 gi|290469699|gb|ADD27118.1| secretion protein HlyD family protein [Meiothermus ruber DSM 1279]
          Length = 327

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 81/227 (35%), Gaps = 7/227 (3%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L  + A++Q +   +     +  L  R  I + +  L  +  +     LE    L++  
Sbjct: 97  RLQLQTAMAQAEEAVRTLAQVREQLAQRRRIAQIQTSLYQVGAIARVEYLEALENLRQAE 156

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             +   +   +   ++   L K+R    + SP  G I+   S  +       Q L +++P
Sbjct: 157 AAVRVAEARVSTLRAQAQAL-KSRRNIHLNSPATGRILTLSSHRAGEPVMAGQVLAEVLP 215

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                  RA +  ++   ++    A V +  +   R    +  +E+I P     +N    
Sbjct: 216 QDVPLVFRAYLPERERPKLRAKAEAEVAWNAFPRQRFGTSRGTVERISPSTVVYNN---- 271

Query: 384 QEYYEVILKITDLAF--SDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           Q  YEV + +  L    ++   ++  G   E    A   +    +  
Sbjct: 272 QAVYEVEISLPSLTLSSAEGTRQVVPGMLGEARIVAARRSALSLLWD 318



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 55/155 (35%), Gaps = 15/155 (9%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT- 93
           + L P+++   +SG +     V+ + +P  G +    V+ G  + +G  L T + + ++ 
Sbjct: 34  AWLTPVQVYALASGALEPRGQVLRVLAPSGGRLVYVGVQPGQLVQKGQRLYTLDGLGSSP 93

Query: 94  -----------DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
                         +    ++  +R  +   +       + Y V      +R E L    
Sbjct: 94  EEARLQLQTAMAQAEEAVRTLAQVREQLAQRRRIAQIQTSLYQV---GAIARVEYLEALE 150

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
               +  +        S  R+    L   R+I+LN
Sbjct: 151 NLRQAEAAVRVAEARVSTLRAQAQALKSRRNIHLN 185


>gi|253564590|ref|ZP_04842047.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251948366|gb|EES88648.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 434

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 101/288 (35%), Gaps = 17/288 (5%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              ++    I S  R    +  ++ S      +  N+  L + +L + Q  L+    L  
Sbjct: 149 QYERLLTSDIYSTMRQKLQQ--QIISDEAVIANFNNELRLKKQILDNSQNQLSKDSILLS 206

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
              +S+ +  Q+    + + L L+E+    ++  +          LE      E +   E
Sbjct: 207 MKGISEQEYQQK----FSTHLSLKESQLNLQSNRQMKQSEISRNQLEIQRICLEETEAKE 262

Query: 268 QNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           +    +    ++L+   K  ++  +  +P+ G + Y   + ++ + Q  Q L  I+P   
Sbjct: 263 KAYSDYITRKNELSNAIKLWKEHYLQYAPVEGELEYLGFWRNNRFVQSGQELFSIIPDKT 322

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
                  +       V+ G T  V+  +Y        K +++ +  I ++        + 
Sbjct: 323 NILGEVVIPSFGAGKVEVGQTVNVKMDNYPYDEYGLLKGVVKSVSRITNKIKTQNGDMDT 382

Query: 387 YEVILKITDLAFSDNNIELRN------GFPAEVLFTAKNTTLAQEIIH 428
           Y VI+   D   ++   ++        G    V    K   L + +  
Sbjct: 383 YLVIISFPDGTLTNFG-KILPLDFETKG---TVEIITKRKRLIERLFD 426


>gi|312620957|ref|YP_003993685.1| microcin h47 secretion protein mche [Photobacterium damselae subsp.
           damselae]
 gi|311872678|emb|CBX86772.1| Microcin H47 secretion protein mchE [Photobacterium damselae subsp.
           damselae]
          Length = 364

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 115/325 (35%), Gaps = 43/325 (13%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           GEI +      I S F+GII +  V+ G  I +G  +   +  +  ++  +     + + 
Sbjct: 55  GEISSSPRPTWIYSNFTGIISERFVQEGDSIKKGASIYKIDVSKKNNIGIVSDNRKRTIL 114

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             I                      ++  ++ + L + +   +++    +     S+K  
Sbjct: 115 IQI----------------------NKINEINENLKENYDRNTRIIQNKLKQYQESIKFL 152

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              +++  +   + +N              ++   K+  +K  ++++ L  Q     +  
Sbjct: 153 SLEIKNNKITINEFKN--------------NMINYKSYQKKGLINKDQLISQILNYNQQ- 197

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              +  +               + N E  +   ++  +L  N+    D ++K  I   + 
Sbjct: 198 ---QSTLTNLIQQENQYKLQVTDLNGELVSNKLKLDNELNNNELKIFD-LNKEPINNSSE 253

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGY 346
           +   I SPI G +                 L++I+P+     Y+   V+ K I ++KKG 
Sbjct: 254 QSIIIRSPINGVVDSLSINH-GQMISVRDSLVQIIPNDISDYYLVLWVSNKIIPYIKKGD 312

Query: 347 TATVRFPHYADIREKKFKAIIEKID 371
              +++  +   +  +FK  I  I 
Sbjct: 313 PVYIKYDAFPAEKFGQFKGTIFDIS 337


>gi|332076365|gb|EGI86828.1| bacteriocin secretion accessory family protein [Streptococcus
           pneumoniae GA41301]
          Length = 453

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 64/439 (14%), Positives = 145/439 (33%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEIAPTSVISSIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +             ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNR 178
              E        +  +Q  D       T ++V N     +S   +++ ++T+++      
Sbjct: 132 GEDEFGYHNTFMNFTKQSHDIELGITKTNTEVSNQANLANSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALL-SSHQKDLTMMKNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +S+     + + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIINNRARLPTSNPHQSILNRYLVASQGQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P  G +  N  F   N       + +I P    ++   I   V    +  + KG 
Sbjct: 312 NTLTAPSKGIVHLNSEFEGENRIPTGTEIAQIFPIITDTREVLITYYVASDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGN-HGITIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|313673856|ref|YP_004051967.1| secretion protein hlyd family protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940612|gb|ADR19804.1| secretion protein HlyD family protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 375

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 67/422 (15%), Positives = 133/422 (31%), Gaps = 70/422 (16%)

Query: 15  ASLKRMTLLSIIGIIGLITWSIL---LPIEISV-----SSSGEILNEDNVVEIKSPFSGI 66
             +K   +L  IG I  +  +       +E +        S  I N           SG 
Sbjct: 3   KKIKIALVLLTIGFIIFVVIATWWIKARLEYASTDAFFIKSDTISNVGFKRV-----SGK 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +   + G ++ +G  L   +D +     +  K  I++L                    
Sbjct: 58  VIQLNFKEGDRVKKGDLLAVIDDSDYRVKAEQLKYEIQSL-------------------- 97

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                   E+Q      K   T S +          S KM+  ++ ++       +    
Sbjct: 98  --------EQQAKSLDDKSSKTSSDIIT--------STKMQTDKVAALKYELASSKKSIE 141

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +  L++  QKD+   K L+EKNA+ +         +     +      + + + + I+ 
Sbjct: 142 EIDILIAQSQKDMERYKVLYEKNAIPKKSYEDIANNLETLKKKRESLQLKIEALGKQIDI 201

Query: 247 LYDEANLEFANY--LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             +E ++   N   + EIS++             +L  L    E   + +P  G +V  +
Sbjct: 202 AENEKDMIKNNRYIISEISKNKSSIAEKINSLKKQLDDLNNMIEDCKLYAPFDG-VVGMK 260

Query: 305 SFSSSNYAQQSQPLMKIVPHSKL----TYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                        +  IV    L         K+    +     G  AT     Y   R 
Sbjct: 261 YVDLGTVVSSGNFIYSIVGDKNLYGYVLLEEGKLKGVDV-----GDKATFIVDAYPKER- 314

Query: 361 KKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIELRN-GFPAEVL 414
             F+  +E I P  +        ++   E+ +V  +I   +  +   ++L   G   E+ 
Sbjct: 315 --FEGEVEAIYPASAATYALVPRDISAGEFTKVSQRIPIRIKITGGKLDLLKVGMGGEIK 372

Query: 415 FT 416
             
Sbjct: 373 IK 374


>gi|219855423|ref|YP_002472545.1| hypothetical protein CKR_2080 [Clostridium kluyveri NBRC 12016]
 gi|219569147|dbj|BAH07131.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 466

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 125/365 (34%), Gaps = 75/365 (20%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           IIK+ +V+ G ++  G  L   +  +    I+  + S+K  +    T KS LD     YD
Sbjct: 90  IIKEIKVKIGDEVKSGDILALLDTKDLQKEIEQMEASLKTTQA---TNKSKLDNAQKAYD 146

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             EK                             S             ++   +LDL++K 
Sbjct: 147 NAEKL----------------------------SREGENSQIAAAEGAVNAAKLDLDDKK 178

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +                K LF+  A+S+ DLN+ E     +    ++   E    L +I 
Sbjct: 179 NTYE-----------DNKVLFQCGAISEQDLNKSEISFKNA----QDTYSESSVALNNIK 223

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +  +       +  ++     E   +  A E  K     +     T+L+P  G I     
Sbjct: 224 DKVNLDLNTAKSNYEQAKFLYEDKSQQIAIERKK-----QQFSDCTVLAPADGII----- 273

Query: 306 FSSSNYAQ--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            S +       S  L++I     +  I  +V    I  VK G    V+     D      
Sbjct: 274 SSVNGVEGNPASGSLLQIQSTDNIVAI-MEVKEADIDKVKNGQKVKVKTDSTGDKI---I 329

Query: 364 KAIIEKIDPIISQQDNNL--------QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +  I KI+ I  ++DN++          +  +EV +KI DL     N +L+ G  A    
Sbjct: 330 QGEIIKIEDIAKEEDNDMLKLKDDSNDEEAKFEVKIKIKDL-----NHKLKIGMKATADI 384

Query: 416 TAKNT 420
             +  
Sbjct: 385 ILEEK 389


>gi|226311691|ref|YP_002771585.1| hypothetical protein BBR47_21040 [Brevibacillus brevis NBRC 100599]
 gi|226094639|dbj|BAH43081.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 396

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 51/369 (13%), Positives = 114/369 (30%), Gaps = 57/369 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I++  ++ G ++  G  + T    E     +  + + K     +D  K  +   ++ 
Sbjct: 55  GGSIEQLSLKEGDEVKAGQVVATLSSAEILAKKEQAEAAYKLSLVKLDQAKKGVSVTDSS 114

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                  +         ++S    L       RS  + +  L+ 
Sbjct: 115 S----------------------NAQVDQAKAVVNSAQAQLDANRNGARSEEITQ--LKA 150

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-----NIHEQK 238
           K    +        +L  MK L  + AV Q  + + +    K+  E +       + +  
Sbjct: 151 KLQAAQTSNQIAATNLERMKKLMAEGAVPQVKVEEAQMQADKAQAEFKAAEEQLKMAQTG 210

Query: 239 NMLRHINELYDEANLEFANYLKEISR---------DLEQNQRTFADEMSKLTILEKTREQ 289
           +    ++    + +   A Y + ++          D++  +         L  +E     
Sbjct: 211 SRKEQVDAAQAQLDQAKAAYNQAVAGRGQVGLKELDVKSAEANVMQAKGALAEMEAYVNN 270

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P+ G +             Q   ++ I   S   Y++  V    + +VK G    
Sbjct: 271 TKLTAPVDGIVKAVAV-QKGELVSQGFTVLTIQTKSDK-YVKFYVNEYMLSNVKTGDQVK 328

Query: 350 VRFPHYADIREKKFKAIIEKIDPIIS------QQDNNLQTQEYYEVILKITDLAFSDNNI 403
           +  P       ++  A +  + P          Q+   +    ++V L ++D        
Sbjct: 329 LFVPALN----REVDAKVVTVAPAADFAVKKATQELGDRDIRSFQVKLLVSDS------- 377

Query: 404 ELRNGFPAE 412
           ELR G   E
Sbjct: 378 ELRPGLTVE 386


>gi|327192259|gb|EGE59224.1| multidrug efflux transporter protein [Rhizobium etli CNPAF512]
          Length = 394

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 59/429 (13%), Positives = 126/429 (29%), Gaps = 87/429 (20%)

Query: 3   HFMWKNLKRNHPASLK--RMTLLSIIGIIGLITWSILLP----IEISVSSSGEILNEDNV 56
           H +   +    PA  +  R  LL    ++ +   +        +     ++ +   + + 
Sbjct: 34  HLVEPAVLSEPPARRRTGRGLLLGATAVVLIAATAYYGHNYWTVGRFEIATDDAYVKADN 93

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             +    SG I +  V + + +  G PL   +D              ++ R  +D  K+ 
Sbjct: 94  TTVAPKVSGYIAEVLVSDNAVVKAGQPLARIDD--------------RDFRAALDQTKA- 138

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                                                   +++   +L  K   +     
Sbjct: 139 ---------------------------------------DVAAAEATLNAKQASLDIQQS 159

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                     + +A  +  +++     NL            Q    +  +   +  +   
Sbjct: 160 TIAAARATVEVDKANETFAEQNNKRYANLATNGYAPVQTAQQAASAIAAAQATITRDTAA 219

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
               ++ +  L               + +L Q + T A + +     E      TI +P+
Sbjct: 220 LDAAVKQVELL---------------NAELAQARATLAHDQAVQHQAELNLSYATITAPV 264

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GTI  N++     Y Q    LM +VP S +  I A     Q+  V+ G    +    + 
Sbjct: 265 DGTI-GNRTLRIGQYVQAGTQLMSVVPTSAVYVI-ANYKETQLTDVRAGQPVDIEVDTFP 322

Query: 357 DIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSD---NNIELRNGF 409
                     ++ + P   Q+      +  T  + +V+ +I      D    N +LR G 
Sbjct: 323 GRTY---HGHVDSLAPASGQEFALLPPDNATGNFTKVVQRIPVKIVLDAEAANGDLRPGM 379

Query: 410 PAEVLFTAK 418
             +     K
Sbjct: 380 SVQPSIDTK 388


>gi|312882434|ref|ZP_07742175.1| Multidrug resistance protein A [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369834|gb|EFP97345.1| Multidrug resistance protein A [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 354

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 98/290 (33%), Gaps = 30/290 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    + + T     N  ++    S           + +    ++     +A      +
Sbjct: 85  LVQIDERDYQTALTQANAHLAVTQASKSNLTAEQALQHSHIHQAQSGVDSAQAEYDRASQ 144

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +T  ++L +K+  SQ+              EL   + +QK  L  ++E   +AN E A 
Sbjct: 145 QVTRSRSLLKKHYASQD--------------ELDSMLAQQKVTLAQLHEA--QANFEAAR 188

Query: 258 YLKEI-SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              ++ +  + Q Q +  +  + +T  +   +   I +P  G I   +S       Q   
Sbjct: 189 DQLDVINSQIVQAQASVKEAEAGVTQAQLNLQYTKIYAPADGFI-GKRSVREGLLTQAGT 247

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-- 374
           PLM +VP     ++ A     Q+ ++ KG   TV    +     ++   I++   P    
Sbjct: 248 PLMSLVP-DNAVWVEANFKETQLNNIHKGQKVTVDIDAFP---GQELTGIVDSFSPATGA 303

Query: 375 ------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                  +      T+    V +KI      +    L  G         +
Sbjct: 304 KFALLPPENATGNFTKIVQRVPVKILITDAKNLKGRLLPGLSVVAKIDTR 353



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 78/235 (33%), Gaps = 17/235 (7%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +    ++  IG+ G   W         V S+     + ++  I    SG I K  + +  
Sbjct: 21  IAATIVMLFIGLAGSGYWFGYGQY---VQSTDNAYLQGDITSISPKVSGYIVKSYITDNQ 77

Query: 77  QILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
           ++ +G  L+  ++        +    + + + S  NL      + S +    +  D  + 
Sbjct: 78  RVHKGDLLVQIDERDYQTALTQANAHLAVTQASKSNLTAEQALQHSHIHQAQSGVDSAQA 137

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            ++   +Q+           +      + S+    K+ L ++     N     ++  ++ 
Sbjct: 138 EYDRASQQVTRSRSLLKKHYAS--QDELDSMLAQQKVTLAQLHEAQANFEAARDQLDVIN 195

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + +   Q  +        +  V+Q  LN Q   +Y            ++ +L   
Sbjct: 196 SQIVQAQASVKE-----AEAGVTQAQLNLQYTKIYAPADGFIGKRSVREGLLTQA 245


>gi|294023820|ref|YP_003547139.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292677600|dbj|BAI99116.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 383

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 49/418 (11%), Positives = 107/418 (25%), Gaps = 65/418 (15%)

Query: 12  NHPASLKRMTLLSIIG----IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             P S KR  L    G    +I L  W     I     S+        V ++     G +
Sbjct: 17  PSPKSQKRKRLFLFFGGGLVLIALSWWIWATFIAGDTESTENAYTNVEVAQVTPLVGGPV 76

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           K+  V N   +  G  L   +D +        ++++      +   +  +  +      L
Sbjct: 77  KRVLVVNTQAVRAGDVLAELDDTD-------LRLAVAQAEAALGRARRQVRQVQETDANL 129

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                 R               + +    +    R                         
Sbjct: 130 AGQVAVRAADEATARADLVRAQADLDKAQLDERRR------------------------- 164

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                          + L    A+SQ +L+  +  V  +   + +            N  
Sbjct: 165 ---------------RRLAGPGAISQQELSDAQTAVRVAQAAVEQARARIAAAEAARNAA 209

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                     +         +         ++L        +  I +P+ G +V  +  +
Sbjct: 210 SGARRANQVLFEDTTV----ETNPEVLAATARLDQARVDLSRAVIRAPVDG-VVDQRHVA 264

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY--ADIREKKFKA 365
                Q   P+M +VP     Y+ A     Q+  V+ G   T+    Y    +   + + 
Sbjct: 265 VGQRVQPGVPIMVVVPVQN-MYVDANFKEGQLSQVRPGLPVTLTSDLYGSDVVYHGRVEG 323

Query: 366 II-EKIDPIISQQDNNLQTQ-----EYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                     +    N         +   V +++      ++ + +     A +  + 
Sbjct: 324 FAGGSGSAFAAIPAQNATGNWIKVVQRLPVRIRLDPRELQEHPLRVGLSMHATIDLSG 381


>gi|225858366|ref|YP_002739876.1| BlpC ABC transporter [Streptococcus pneumoniae 70585]
 gi|225720064|gb|ACO15918.1| BlpC ABC transporter [Streptococcus pneumoniae 70585]
          Length = 453

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 63/439 (14%), Positives = 145/439 (33%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEIAPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +             ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNR 178
              E        +  +Q  D       T ++V N     +S   +++ ++T+++      
Sbjct: 132 GEDEFSYHNTFMNFTKQSHDIELGISKTNTEVSNQANLANSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +     +++ + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIINNRARLPTGNPHQSILNRYLVASQGQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P  G +  N  F   N       + +I P    ++   I   V    +  + KG 
Sbjct: 312 NTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPIITDTREVLITYYVASDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGN-HGITIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|298292263|ref|YP_003694202.1| secretion protein HlyD [Starkeya novella DSM 506]
 gi|296928774|gb|ADH89583.1| secretion protein HlyD family protein [Starkeya novella DSM 506]
          Length = 407

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 83/279 (29%), Gaps = 30/279 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K     I++   ++     ++ +   +      +     A L+  Q +      L +   
Sbjct: 134 KAAEDKIATQQATIDRYGQQISAGQASVDQARAQLVADEAELNRSQLEFDRQSELVKSQF 193

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+  L+       K+   +  +     +   +I  L                    +  
Sbjct: 194 SSKATLDNARADRDKAQAAVDASKASVASAQANIAVL---------------EAQRTEAA 238

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           R   +  +     ++  +   + +P  G ++ N++       Q    L  +VP     Y+
Sbjct: 239 RVLDEYRTSRDQAQRDLDFTVVKAPFDG-VMGNRAVQVGQLVQPGTRLAALVPLD-KVYV 296

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQ 382
            A     Q+  +K G T  V    Y D +   F   +  + P           +      
Sbjct: 297 DANFKETQLGELKPGQTVDVEVDAYPDEQ---FHGRVVSVAPASGSVFSLLPPENATGNF 353

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFP--AEVLFTAKN 419
           T+    V ++I   A +    ELR G    A V      
Sbjct: 354 TKIVQRVPVRIELDAAAREKAELRPGMSVIATVDTRTGE 392


>gi|332970548|gb|EGK09535.1| macrolide efflux protein MacA [Psychrobacter sp. 1501(2011)]
          Length = 459

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 59/389 (15%), Positives = 122/389 (31%), Gaps = 83/389 (21%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    IE +V +SG++    N V++ +  SG + K  V+ G Q+ +G  +   + I   +
Sbjct: 48  AQTGDIERNVMASGKVKA-LNTVDVGAQVSGEVTKLYVKVGDQVKKGDLIAQIDQITQKN 106

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +                                                  S       
Sbjct: 107 NL--------------------------------------------------SNQQATLE 116

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
            G + +  +     +R   +   + DL ++ + L+  +S    D   ++ L  ++A+SQ 
Sbjct: 117 QGRAGLQSAQAEYYSRKAGLESAQADLASREADLKQAIS----DYDRLRPLLAQDAISQQ 172

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++   +  V K+   +       K     +                    ++  N+    
Sbjct: 173 EVQTAQTNVEKAQASVAAARAAIKTAQAALVTAQS---------------NIASNEADIR 217

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRA 332
              + L+         TI +PI GT+V             +Q    IV  +      I A
Sbjct: 218 KAQTNLSTANTDLGYTTIRAPIDGTVVAV-VTEQGTTVNANQAAPTIVTLADLSTVRINA 276

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--YYEVI 390
           +++   + +VK G      F    D    K+ A++  I+P   +  N   T    YY   
Sbjct: 277 QISEADVINVKAGMPVY--FNTIGDPDT-KYDAVLTAIEPAPEEISNTSSTDSAIYYIGY 333

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +++ +         +     A+V      
Sbjct: 334 VEVPNPER---RFRI--DMTAQVYVVVDK 357


>gi|53711302|ref|YP_097294.1| putative hemolysin secretion protein [Bacteroides fragilis YCH46]
 gi|52214167|dbj|BAD46760.1| putative hemolysin secretion protein [Bacteroides fragilis YCH46]
 gi|301161089|emb|CBW20626.1| putative exported protein [Bacteroides fragilis 638R]
          Length = 452

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 101/288 (35%), Gaps = 17/288 (5%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              ++    I S  R    +  ++ S      +  N+  L + +L + Q  L+    L  
Sbjct: 167 QYERLLTSDIYSTMRQKLQQ--QIISDEAVIANFNNELRLKKQILDNSQNQLSKDSILLS 224

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
              +S+ +  Q+    + + L L+E+    ++  +          LE      E +   E
Sbjct: 225 MKGISEQEYQQK----FSTHLSLKESQLNLQSNRQMKQSEISRNQLEIQRICLEETEAKE 280

Query: 268 QNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           +    +    ++L+   K  ++  +  +P+ G + Y   + ++ + Q  Q L  I+P   
Sbjct: 281 KAYSDYITRKNELSNAIKLWKEHYLQYAPVEGELEYLGFWRNNRFVQSGQELFSIIPDKT 340

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
                  +       V+ G T  V+  +Y        K +++ +  I ++        + 
Sbjct: 341 NILGEVVIPSFGAGKVEVGQTVNVKMDNYPYDEYGLLKGVVKSVSRITNKIKTQNGDMDT 400

Query: 387 YEVILKITDLAFSDNNIELRN------GFPAEVLFTAKNTTLAQEIIH 428
           Y VI+   D   ++   ++        G    V    K   L + +  
Sbjct: 401 YLVIISFPDGTLTNFG-KILPLDFETKG---TVEIITKRKRLIERLFD 444


>gi|295135404|ref|YP_003586080.1| secretion protein HlyD family protein [Zunongwangia profunda
           SM-A87]
 gi|294983419|gb|ADF53884.1| secretion protein HlyD family protein [Zunongwangia profunda
           SM-A87]
          Length = 360

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 57/377 (15%), Positives = 117/377 (31%), Gaps = 70/377 (18%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E N+  I    SG I+K  V +  ++ +G  LL  ++ +        KV ++  + ++ 
Sbjct: 44  VEANMNPIIPHVSGYIEKVFVSDNQKVKKGDTLLIIDNRDY-------KVKLQQAKANLL 96

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +S +                                  V    I S   +     +++
Sbjct: 97  AAESQVG---------------------------------VAKASIGSYQANAAASNSQV 123

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +S   N    E K       L   Q+D    +NLF  +++++    Q      ++  +L 
Sbjct: 124 KSAGGNIKSAEIK-------LWRAQQDFKRYENLFANHSITEQQYEQALAAKQEAEQQLE 176

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +++K      N    +  +            +   +       + L       +   
Sbjct: 177 ILKNQEKASASQRNAAVSQTKIS--------ENQVNVAEANVESAKAALDAASLNMDYTI 228

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +PI G +          + Q  Q L  +V       I A     Q++ ++ G    + 
Sbjct: 229 ITAPIDGQLSSVDI-QPGQFVQPGQSLFYLVNTYDKWII-ANFKETQLEKMRIGQKVGIE 286

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDN 401
              Y D    +F+  I    P    +      +  T  + +      V ++ +D    + 
Sbjct: 287 VDAYPDY---EFEGKITAFSPATGARFSLLPPDNATGNFVKTVQRLPVKIEFSDENDKEK 343

Query: 402 NIELRNGFPAEVLFTAK 418
              LR+G    V    K
Sbjct: 344 LDRLRSGMNVLVDVHLK 360


>gi|218437921|ref|YP_002376250.1| efflux transporter RND family, MFP subunit [Cyanothece sp. PCC
           7424]
 gi|218170649|gb|ACK69382.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           7424]
          Length = 490

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 49/382 (12%), Positives = 115/382 (30%), Gaps = 33/382 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + + SSG +   ++V  I     G + K  V+ G ++ +G  L   E+ E        
Sbjct: 56  LSVKIESSGTVEPIESV-NISPKNQGRLVKLLVDQGMRVKRGQVLAVMENAEIQAQGYQA 114

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +     +    +  +               ++ +  L                   S
Sbjct: 115 QARLVEAEANFKAAQVRI-----------PGEIAQAKARLAQAQARFGQAQASLRQSQES 163

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           + R ++    ++R++       E +    ++L             +      ++  L + 
Sbjct: 164 IPRDIEQARAQLRAVESRYQLAEARVKRNQSLAEQGAITEDDFDAVVNDYLNAKASLLEA 223

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            + + +        I + +  +        EA +      K    ++ Q           
Sbjct: 224 VQRLEQFKYTANPEIAQLQQDVVEAQAAVGEAQIALEQREKTAEAEIAQLGAAVQAAKGA 283

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYIR 331
           L  ++       I +P  G I   +  S   +           S     I+  ++   + 
Sbjct: 284 LEEVKIQFNDTVIRAPFEGIITQ-RYASEGAFVTPTTSASSTASATSSSILAMARGLKVV 342

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           AKV    +  ++ G  AT+    + +     FK  + +I P    + N       +EV +
Sbjct: 343 AKVPEVDLSLLQTGQPATIIADAFPNE---VFKGQVVRIAPEAIIEQNVTS----FEVTI 395

Query: 392 KITDLAFSDNNIELRNGFPAEV 413
                A      +L +    +V
Sbjct: 396 -----ALLTGQEKLLSKMNVDV 412


>gi|149276766|ref|ZP_01882909.1| putative hemolysin secretion protein [Pedobacter sp. BAL39]
 gi|149232435|gb|EDM37811.1| putative hemolysin secretion protein [Pedobacter sp. BAL39]
          Length = 437

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 54/387 (13%), Positives = 133/387 (34%), Gaps = 15/387 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + ++ I+ I     W I  P    V+    I  E + +++ +  SG I     ++   + 
Sbjct: 32  IFVVLIMIIFCSFGWIIKYP--DVVTGEIVINAESSPIKLVANSSGRINLLNSKDMMDVQ 89

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G+ +   ++      +   K  + N +          D  NN+  +          +L 
Sbjct: 90  PGSYIAVIQNSANYSDVLTIKSILVNFKG---------DGSNNEQILKILPRNVSLGELN 140

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL-LSSHQKD 198
                + ++ S+   Y + + Y      L ++   Y   LD+    S +    LS   K 
Sbjct: 141 IKYFTFVNSLSQFVEYRVDNSYNKQNKILQKLLDEYRRILDISKTRSDMSGQNLSIMNKL 200

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
             +   L  K  +SQ + ++ +  +  +    +  + +       + +   +        
Sbjct: 201 HNIDTGLLSKKVLSQLEKDRSQINLIAAQEGHQNMLKDVSLTTAQLQQTQSQLEQNILQQ 260

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            ++ S+       +FA+    +   E    +    +P+ G + + + +++  + Q  +  
Sbjct: 261 RQKESQLTLDLLTSFAELEDNIKAWE---HKYVFKAPMTGKLQFLKFWNTDQFIQNGESA 317

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             +VP       +  +       VKKG    ++  +Y  +     K  +  I    +   
Sbjct: 318 FTVVPSKNHIIGQMTLLASGAGKVKKGQEVIIKLDNYPYMEYGSIKGRVSSISLTTNPIS 377

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIEL 405
                ++ Y V + + D   ++   EL
Sbjct: 378 TKEGMKDTYLVSVDLPDRLKTNYGSEL 404


>gi|17231772|ref|NP_488320.1| hypothetical protein alr4280 [Nostoc sp. PCC 7120]
 gi|17133415|dbj|BAB75979.1| alr4280 [Nostoc sp. PCC 7120]
          Length = 436

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 47/393 (11%), Positives = 124/393 (31%), Gaps = 54/393 (13%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSP----FSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           +  P   +V++ G +  +  V+++ +P        ++K  V+ G ++  G  +   ++  
Sbjct: 55  VTAPQIKTVTALGRLEPKGEVIKLSAPSSSGQGSRVEKLLVKEGDRVKAGQVIAILDN-R 113

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                  ++         ++ EK        + +  +      + Q      +   T ++
Sbjct: 114 DRLEAAYQEAQEAVKVAQVNLEKVREGAKVGEINAQKAEIARVQAQTTGDGREQQETVAR 173

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +                             +     L A L + Q +    + L+   A+
Sbjct: 174 LEAQWQGEKSAQ------------------QATVKRLEAELKNAQSEWERYQKLYADGAI 215

Query: 212 SQ--------------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           SQ                L++ +  + +     R+ I E K  L  IN    +     A 
Sbjct: 216 SQSSYDTKRLSLDTITQQLSEAQANLQRIDSTGRKQISEAKTALYRINATGSKQVSAAAA 275

Query: 258 YLKEISR----DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
            L +I+     D++  +      ++     +   +Q  + SP  G I    + +      
Sbjct: 276 TLNKIAEVRPIDVQAAKVEVNRAVAAAKQAKANLDQVYVRSPQDGVIFDIYTRA-GEVVS 334

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-- 371
               ++++   +   Y   +V    +  V+ G    +     +     K +  ++++   
Sbjct: 335 T-DGIVEMG-QTSQMYAVVEVYQSDVNKVRPGQKVEIS----SKSLSGKLQGTVDQVGWK 388

Query: 372 ----PIISQQDNNLQTQEYYEVILKITDLAFSD 400
                II+   +        EV +++ + +   
Sbjct: 389 VQRQNIINSDPSENIDSRVVEVHVRLDEASSQK 421


>gi|265764749|ref|ZP_06093024.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263254133|gb|EEZ25567.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 452

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 101/288 (35%), Gaps = 17/288 (5%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              ++    I S  R    +  ++ S      +  N+  L + +L + Q  L+    L  
Sbjct: 167 QYERLLTSDIYSTMRQKLQQ--QIISDEAVIANFNNELRLKKQILDNSQNQLSKDSILLS 224

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
              +S+ +  Q+    + + L L+E+    ++  +          LE      E +   E
Sbjct: 225 MKGISEQEYQQK----FSTHLSLKESQLNLQSNRQMKQSEISRNQLEIQRICLEETEAKE 280

Query: 268 QNQRTFADEMSKLTILEKTREQKTIL-SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           +    +    ++L+   K  ++  +  +P+ G + Y   + ++ + Q  Q L  I+P   
Sbjct: 281 KAYSDYITRKNELSNAIKLWKEHYLQYAPVEGELEYLGFWRNNRFVQSGQELFSIIPDKT 340

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
                  +       V+ G T  V+  +Y        K +++ +  I ++        + 
Sbjct: 341 NILGEVVIPSFGAGKVEVGQTVNVKMDNYPYDEYGLLKGVVKSVSRITNKIKTQNGDMDT 400

Query: 387 YEVILKITDLAFSDNNIELRN------GFPAEVLFTAKNTTLAQEIIH 428
           Y VI+   D   ++   ++        G    V    K   L + +  
Sbjct: 401 YLVIISFPDGTLTNFG-KILPLDFETKG---TVEIITKRKRLIERLFD 444


>gi|186686809|ref|YP_001870002.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186469161|gb|ACC84961.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
          Length = 538

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 69/511 (13%), Positives = 158/511 (30%), Gaps = 90/511 (17%)

Query: 15  ASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           +    +TL+S+  ++ L I WS+   I I++   G ++    V+ ++S  SG +    ++
Sbjct: 31  SPKSWLTLISLSSLVILSIVWSVYGRIPITIEGKGVLIYPRKVIPLESKSSGQLLNLNIK 90

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH------IDTEKSALDFLNNKYDVL 127
            G  I +G  L T +       +  +K  +  +         +  + +  D+   +    
Sbjct: 91  VGDIIQKGQLLATIDQTLLHTQLQQQKSKLTEMTAQNQAASLLQGQGNTQDYKTIQQQRQ 150

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT------RMRSIYLNRLDL 181
                 +E Q L  + +  S  S            +    LT         S+   R   
Sbjct: 151 NAQQRIQELQALSPILRTKSFESIQKQRLQLQQRVTKLEALTPILKRKNHESLQQQRQSF 210

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK--- 238
           + +    +A L   +K +   K L ++  VS+ +L Q +   +K   E+ +   + K   
Sbjct: 211 QQRIQAAKAQLPFIEKKVKSFKQLVQQKVVSETELYQTQEEYFKKVEEIAQLETQVKDLE 270

Query: 239 ------------------------------------------NMLRHINELYDEANLEFA 256
                                                     N +  +     + +   A
Sbjct: 271 VREGDAQERYINNQNEIASNLADLQKLELEETNADEAYLKNQNEIAQLRAELKDLDSREA 330

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTRE-QKTILSPIAGTIVYNQSFSSSNYAQQS 315
           N+ K+  +D     R   +   ++  LE+       I+S  +G I+     +        
Sbjct: 331 NHAKQNLQDSSSRNREIQEVKREIASLEEQLNSNSQIISQHSGRILEITV-TPGQVINVG 389

Query: 316 QPLMKIV---PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             L  +    P +KL  +         + ++ G    +        R       I  + P
Sbjct: 390 TRLANVGAENPSNKLLSV-TYFPIADGKKIQSGMPIQITPQTVKRERFGGIVGNINDVSP 448

Query: 373 IISQQDN---------------NLQTQEYYEVILKITDLAFSDNN----------IELRN 407
               ++                + + + + +V  ++   + + +           +++  
Sbjct: 449 FPITKEAAASLVGNPELVEGLVSQKQEGFLQVFAELEQDSTTPSGYKWSSSNGPQMKISP 508

Query: 408 GFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           G    V    +       ++ PI  +   IF
Sbjct: 509 GTTTVVRVKVEERAPITFVL-PILRSVSGIF 538


>gi|206889817|ref|YP_002249422.1| HlyD family secretion protein, putative [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206891184|ref|YP_002249372.1| HlyD family secretion protein, putative [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206741755|gb|ACI20812.1| HlyD family secretion protein, putative [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206743122|gb|ACI22179.1| HlyD family secretion protein, putative [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 316

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 90/298 (30%), Gaps = 34/298 (11%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +  +   +    + R  +L    G        +       +    +  +   ++ Y + 
Sbjct: 42  RIEGRETNISPKIQGRITKLYKDEGDTARQEELLCEIDSEQLTARYRNAVETAQAYYSSI 101

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
                     +A     +KD     +L ++  VS++D ++ +     +  E+   +    
Sbjct: 102 AQARANLIKAQASYEKAKKDYDRYSSLLKEELVSKSDFDRVKMQYESAQAEVEAAVKAIT 161

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                                KE   DL + +                     I SP  G
Sbjct: 162 QAESSYRAAEQRI--------KEAQADLNETK---------------------IYSPAGG 192

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            I+                L  +V      Y++  +   +I  +K G  A V    Y D 
Sbjct: 193 VILSRPV-EVGEVVNPGTVLYVMV-DLNKLYVKVYIPEPEIGKLKIGLPARVYIDAYPD- 249

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             K F   I KI         N++T+E    ++   +++  +    L+ G PA+V+  
Sbjct: 250 --KYFNGKITKIYEQAEFTPKNVETKEERVKLVFGVEVSVENPEGLLKPGMPADVVIK 305



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 54/190 (28%), Gaps = 15/190 (7%)

Query: 18  KRMTLLSIIGIIGLITWSILLPI----EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           K + +  I+  I  + + ++       E  +  SG I  E     I     G I K   +
Sbjct: 7   KLLIVFVILIFIFSLVYIVITKTTKFPEGLIILSGRI--EGRETNISPKIQGRITKLYKD 64

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G    Q   L   +  + T        + +     I   ++ L      Y+  +K ++ 
Sbjct: 65  EGDTARQEELLCEIDSEQLTARYRNAVETAQAYYSSIAQARANLIKAQASYEKAKKDYDR 124

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
               L + L         V       V    +     + +        E+        + 
Sbjct: 125 YSSLLKEEL---------VSKSDFDRVKMQYESAQAEVEAAVKAITQAESSYRAAEQRIK 175

Query: 194 SHQKDLTMMK 203
             Q DL   K
Sbjct: 176 EAQADLNETK 185


>gi|84385882|ref|ZP_00988912.1| multidrug resistance protein A [Vibrio splendidus 12B01]
 gi|84379198|gb|EAP96051.1| multidrug resistance protein A [Vibrio splendidus 12B01]
          Length = 354

 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 92/286 (32%), Gaps = 28/286 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    + + +     N  +S V  S+   + +           E++    +A      +
Sbjct: 85  LVQIDDRDYQSALAQANAHLSVVQSSVHNLIAKQTLQRSQINQAESRVDSAQAEYERAIQ 144

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +   ++L ++N  SQ++++        +  EL E                        +
Sbjct: 145 QVVRSRSLLKRNYASQDEVDSMVAQQKVTQAELEEAKANLVAS---------------ND 189

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L  I+ ++EQ   +  +  ++    +   +   + +P  G I   +S       Q   P
Sbjct: 190 QLIVIASEIEQANASVTEAQAQRDQAQLNLDYTKVYAPADGVI-GKRSVREGLLIQAGAP 248

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           LM +VP +   +I A     Q+  + KG T  V    +     +  + +++   P     
Sbjct: 249 LMSLVP-NNQVWIEANFKETQLSGIHKGQTVEVELDAFP---GQPLEGVVDSFSPATGAK 304

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                 +      T+    V +KI      +    L  G       
Sbjct: 305 FALLPPENATGNFTKIVQRVPVKIIIPDQQELKGRLLPGLSVVATI 350


>gi|281358134|ref|ZP_06244618.1| conserved hypothetical protein [Victivallis vadensis ATCC BAA-548]
 gi|281315507|gb|EFA99536.1| conserved hypothetical protein [Victivallis vadensis ATCC BAA-548]
          Length = 441

 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 54/409 (13%), Positives = 129/409 (31%), Gaps = 71/409 (17%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
               L   + ++  + W I   I   VS +G ++ +     I++P  G++  F +E G  
Sbjct: 32  ALALLALGVTVVAALAWGICGVIYERVSGNGIVMLQSRFDTIQAPAGGVLISFDLETGDF 91

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  +         + +      +K L+ +++  +    +L                 
Sbjct: 92  VRRGQMVGRLFSFSDLENLRESYQKLKMLQGNLEEVRRYTGWL----------------- 134

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                                        K  +      +   L+     L   L    +
Sbjct: 135 -----------------------------KKGKQNHFQKSSEVLDETIGRLNEELEWLSR 165

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +   + L E+ A+SQ   ++++    K   +L+         L   N L  EA+   A 
Sbjct: 166 YVDKGRGLSERGAISQQQWHEEQ---EKYHAKLKSRADYLLRKLEEENSL-SEADFTLAK 221

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            +  +  +++          +KL           I+S  +GT+     ++  +       
Sbjct: 222 EVMSVEVEVKSALYEVELLRNKLEY------NTRIVSTHSGTVTSVN-YTPGSIVAAEAN 274

Query: 318 LMKIVPHSKLT----YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           L  ++     T     + A  +    + ++ G +A V        R+   +  +  +   
Sbjct: 275 LASLIDLDDQTDETWELYAYFSVADSKKIRPGMSAIVTPSSVKAERDGSIRGTVTHVGTY 334

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF-TAKNTT 421
           I   ++  +T           + AF+   ++     P EV    +++ +
Sbjct: 335 ILPVESIDRTFR---------NAAFAQYLLKQCANMPVEVRILLSRDRS 374


>gi|284051299|ref|ZP_06381509.1| RND family efflux transporter MFP subunit [Arthrospira platensis
           str. Paraca]
          Length = 494

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 54/387 (13%), Positives = 119/387 (30%), Gaps = 59/387 (15%)

Query: 36  ILLPIEISVSS-----SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            + P+E++  +     +G +   D +  +       I++  V  G  + QG  +   +D 
Sbjct: 96  TVAPVEMTTVARTLDVTGTVEAYDLLPVLPQASGVQIQQVLVNQGEMVTQGQVMAVLDDS 155

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                ID     +++    +   ++ L          + +    E  L     +      
Sbjct: 156 VLRSQIDQANAQVESANSLVRQREANLGQAQAGLAQAQASLLEAESLLTQNQARLAEA-- 213

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                                                 +A L   ++++   ++L  +  
Sbjct: 214 --------------------------------------KANLDQARREVERYEDLSSQGV 235

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VS+ +L  +      +   +R       +    I+          AN       ++   +
Sbjct: 236 VSRQELETRITTAKTAEEGVRVAEANISSARATISSARANIGSAQANVES-AESNIRSAE 294

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  +++  LE  REQ  + +P++G +   Q  +       +Q L  I+       +
Sbjct: 295 AEVRSAQARVRQLETQREQTVVRAPMSGIV--AQRTARVGDVTGNQQLFSII-AENQLEL 351

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            AKV   Q+  V+ G   TV         +   + ++ +I P+I  Q           V 
Sbjct: 352 HAKVPETQLSQVRIGAAVTVTSDA-DQNLQ--VRGVVREIAPLIDPQSRQAT------VK 402

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTA 417
           + +  L    ++  LR G       T 
Sbjct: 403 IDLPPLGAIRDSF-LRPGMFLRAAITT 428


>gi|183219781|ref|YP_001837777.1| putative associated RTX toxin transporter [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
 gi|189909916|ref|YP_001961471.1| efflux pump [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|106879718|emb|CAJ90428.1| putative associated RTX toxin transporter [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
 gi|167774592|gb|ABZ92893.1| Efflux pump [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167778203|gb|ABZ96501.1| Putative associated RTX toxin transporter [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 367

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 63/182 (34%), Gaps = 5/182 (2%)

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +YD++ LEF      +  ++++ +   A       + ++      I  P +G I      
Sbjct: 185 IYDQSLLEFNEEFGNLKDEIQREENIIASLRGDTKLKKERVANAVIRMPFSGVIGELAVN 244

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +      + Q +  ++   +      +V+ K I  VK G +A ++   +        +  
Sbjct: 245 NVGQNIIRGQTVASLMEEGQPLEAIVEVSSKDIGAVKIGLSAVIKVKAFHQNDFGVVEGT 304

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           + +I P   ++D+         +IL   DL       +L  G             + Q +
Sbjct: 305 VSQIIPNTKEKDSFSV-----ILILGTQDLNQDGKQFQLFPGLKVVADIVIDRKNIYQIL 359

Query: 427 IH 428
             
Sbjct: 360 FR 361


>gi|37520344|ref|NP_923721.1| hypothetical protein gll0775 [Gloeobacter violaceus PCC 7421]
 gi|35211337|dbj|BAC88716.1| gll0775 [Gloeobacter violaceus PCC 7421]
          Length = 448

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 56/385 (14%), Positives = 111/385 (28%), Gaps = 94/385 (24%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS++G +     V  I     G +    V+ G  + +G  L   ++              
Sbjct: 61  VSAAGIVKPLTPV-NISPKQPGRLAALYVDQGQAVKKGQVLARMDNT------------- 106

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                               D  G+       +     +     
Sbjct: 107 ------------------------------------DLQGQLLQAQGTLAAAQANLRKLQ 130

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
              +   +R    N  D E +    R+   S+ +       LF   AVS+N         
Sbjct: 131 AGNRTQEIRQAEQNLRDAEAQLIGARSTYESNAQ-------LFASGAVSRN--------- 174

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                 L  +  + +++   I  L  +A+L  A +  E   D++  +         L  +
Sbjct: 175 -----ALDVSRSQYESLQARIGALRQQADLSKAGFRPE---DIDTARAQVLQAEGALKTI 226

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--------IVPHSKLTYIRAKVT 335
           +       I +P AG I   +  +  ++   +             I+  +      A V 
Sbjct: 227 QTQVNDTAIRAPFAGVITQ-KFANPGSFVTPTTSASATSSATSSSILAMAGELEAVASVA 285

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              ++++  G + T++   Y       FK  +  + P      N       +EV ++ITD
Sbjct: 286 ESDVRNIYPGQSVTLQVDAYPGR---SFKGQVRLVAPEAVVVQNVTS----FEVRVRITD 338

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNT 420
                    L++G     +F     
Sbjct: 339 PDRRL----LKSGMNLTAVFRVGER 359


>gi|168490576|ref|ZP_02714719.1| BlpC ABC transporter [Streptococcus pneumoniae CDC0288-04]
 gi|183574936|gb|EDT95464.1| BlpC ABC transporter [Streptococcus pneumoniae CDC0288-04]
          Length = 453

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 60/439 (13%), Positives = 144/439 (32%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEIAPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +             ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
              E          +++   ++      +T         +S   +++ ++T+++      
Sbjct: 132 GEDEFGYHNTFMNFTKQSHDIELGITKTNTEVSNQANLSNSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +     +++ + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIINNRARLPTGNPHQSILNRYLVASQGQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ SP  G +  N  F   N       + +I P    ++   I   V+   +  + KG 
Sbjct: 312 NTLTSPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGNHGT-TIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|149276140|ref|ZP_01882285.1| hypothetical protein PBAL39_22755 [Pedobacter sp. BAL39]
 gi|149233568|gb|EDM38942.1| hypothetical protein PBAL39_22755 [Pedobacter sp. BAL39]
          Length = 455

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 46/372 (12%), Positives = 112/372 (30%), Gaps = 53/372 (14%)

Query: 42  ISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            ++   G +     +D    I++   G I+++ V  G ++ +G  +L             
Sbjct: 55  QTIPGRGTVTALRPQDRPQTIQNQIGGRIERWYVSEGQEVKKGDTIL------------- 101

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                      + +E S   F       L++   +++        K  +T +++     S
Sbjct: 102 -----------LISELSQSYFDPELPQRLQEQLMAKQGSEDAAKQKMRATETQISALN-S 149

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +   L     +++               +R      Q  L   +  F+    S  D+  
Sbjct: 150 GLRFQLVSAENKVKQSINYVTSDSADLEAVRQYYKVSQARLERYEQGFKNGLFSLTDIET 209

Query: 219 QERIVYKSTLEL----------RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           +   V     +L          R+ +   +  L +I   Y E+  +  + +         
Sbjct: 210 RRLNVQNDNAKLIAQENKLNSSRQGLLNARIELDNIRAKYQESLGKAQSDMGTALSSQAS 269

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +   A   +++   +  R    + +P  G ++           ++S+ +  + P   + 
Sbjct: 270 AKGDIAKLRNEIANFDFRRGLYAVRAPQDGYVIKTMKAGIGENIKESESVATLQPKHPMV 329

Query: 329 YIRAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
                V    +  +               V+F  +  +    F   +  ID + S     
Sbjct: 330 AAEIYVNAMDVPLILDNSEVRLQFEGWPSVQFSGWPSVAVGTFAGQVFSIDRVSSAGGT- 388

Query: 381 LQTQEYYEVILK 392
                 Y V++K
Sbjct: 389 ------YRVLVK 394


>gi|328542229|ref|YP_004302338.1| Secretion protein HlyD family protein [polymorphum gilvum
           SL003B-26A1]
 gi|326411979|gb|ADZ69042.1| Secretion protein HlyD family protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 363

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 54/415 (13%), Positives = 128/415 (30%), Gaps = 61/415 (14%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            R  P  L   TL ++I ++G   W +         +   +  +  +V + S   G +  
Sbjct: 5   ARTRPWRLYGATLAALI-VLGAGGWWLYQQFIHVFVTDARVAAD--IVALSSRVPGWVTA 61

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            +V  G  + +G  L+  +D E+  L+      I  +    +  ++ +   +        
Sbjct: 62  VEVIEGDSVQKGRVLVRIDDRESRLLVQELDAQIVGISRRREEIEARIKLTD-------- 113

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                                              +   +R+ +        E   +   
Sbjct: 114 -----------------------------------RQTASRIAAKEAAVRAAEAALAAAM 138

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A     ++D    + L    A+++  L+Q    +  +  ++     + +N    + E   
Sbjct: 139 AQRDLARQDNDRAEKLVPSGAITRARLDQTRAALETAKQQVLSAQADLENARAALAEAEA 198

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                       +   L +         ++        E +TI  P  G +V      + 
Sbjct: 199 AREELTV-----LRTQLAELGPEEQRLRAQRERAALDLEDRTIAMPFDG-VVDRTFVDAG 252

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            Y    Q L+ +V   +   + A V    I+  + G   T+        R   F+  + +
Sbjct: 253 EYITPGQRLL-MVHDPEQVRVEANVKETDIRFFQPGKIVTITVDALPGRR---FEGTVTR 308

Query: 370 IDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAKN 419
           +    + +     N   +  + ++  ++   +A   +  EL+ G   E+   A +
Sbjct: 309 VGQAATSEFALLPNPNPSGNFTKITQRLPVRIAVRQDGGELKPGMMVELEARAGD 363


>gi|262373202|ref|ZP_06066481.1| multidrug resistance secretion protein [Acinetobacter junii SH205]
 gi|262313227|gb|EEY94312.1| multidrug resistance secretion protein [Acinetobacter junii SH205]
          Length = 378

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 43/366 (11%), Positives = 100/366 (27%), Gaps = 61/366 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           ++ S   G + +  V++  Q+ +G  L+  +  +    +   +  +   +      ++  
Sbjct: 63  QVTSMIGGQVAEVLVKDTQQVKRGDILVKIDQRDAQIQLAQAQAELAKAQRQYKQSQANS 122

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             LN++  V +    S                                            
Sbjct: 123 SSLNSQVIVTKDEITS-------------------------------------------- 138

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
               + + +  +A       +L     L    A+S+ +L++ +  V  +   L       
Sbjct: 139 ---AQAQVNKAQAEYDRVSLELKRRNELAASGAISKEELSKSQSAVSTAKASLELAQAGL 195

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              +   N          A                 A     L       E+  I +P+ 
Sbjct: 196 AQAISSRNAAVSTLAANDALIQGVNEASTPDVLVAKAHVDQALL----DLERTIIRAPVD 251

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +                 +M +VP     Y+ A     Q+  VK G T T+    Y D
Sbjct: 252 GVVTRKNI-QIGQRVAPGTVMMSVVPV-SALYVDANFKESQLAKVKAGQTVTLTSDLYGD 309

Query: 358 I-----REKKFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRNGF 409
                 + + F         +I  Q+      +  +   V + +     +++ + +    
Sbjct: 310 EVVYHGKVQGFSGGTGAAFALIPAQNATGNWIKVVQRLPVRITLDPKELAEHPLRVGLSM 369

Query: 410 PAEVLF 415
             ++  
Sbjct: 370 QVDIDL 375


>gi|224373659|ref|YP_002608031.1| hypothetical protein NAMH_1651 [Nautilia profundicola AmH]
 gi|223590040|gb|ACM93776.1| putative protein [Nautilia profundicola AmH]
          Length = 374

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 50/364 (13%), Positives = 107/364 (29%), Gaps = 61/364 (16%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+K  V+ G  + +G  L   E           ++  K L  +I   +  +     + 
Sbjct: 53  GKIEKIYVKEGENVKKGELLAKLET-------KELEIQKKELLANIKALEDKIKATVIQK 105

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           + L    ++  + L +   K                                N   +   
Sbjct: 106 NKLSSDIDTNLKLLNNEKLKLQK-----------------------------NIEAMAFA 136

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              +R  L   + D    + L+++  +S+   +  +   Y    ++     +   +    
Sbjct: 137 IDAMRYKLDKLKNDYKKFQKLYKQGKISKEKYDSVKVAYYSLKDQISSQERKFDALQLEN 196

Query: 245 NELYDEANLEFAN--YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
           N L  +  L   N   ++ + + +E  Q        KL ++    +   I SPI G +  
Sbjct: 197 NTLELKIKLALNNKKEIQRLQKSIEAQQNQLKGLNEKLALINTNIQNSYIYSPINGRVAK 256

Query: 303 NQSFSSSNYAQQSQPLMKIV-PHS---KLTYIRAKVTPKQIQHVKKGYTATVRFPH---- 354
            +  + +        ++ +V P            K+       +K G    +        
Sbjct: 257 -KFANDNEVLDAGMKVLSVVNPKDLYVLDLLEETKMK-----GIKPGCKVKIHIDALDKD 310

Query: 355 ---YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              Y         A    +   IS  +     Q +Y V +K   +    + + +  G   
Sbjct: 311 FDGYVSEILPASAATFALVPRDISSGEFTKLAQRFY-VRIKFDKI---PDGVLV--GMSG 364

Query: 412 EVLF 415
           EV  
Sbjct: 365 EVEI 368


>gi|319946015|ref|ZP_08020264.1| competence factor transporter ComB [Streptococcus australis ATCC
           700641]
 gi|319747823|gb|EFW00068.1| competence factor transporter ComB [Streptococcus australis ATCC
           700641]
          Length = 453

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 81/439 (18%), Positives = 161/439 (36%), Gaps = 39/439 (8%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
            L ++ I+G    S+    E+++SS G I     V +I+S  +  I+   ++   +I +G
Sbjct: 29  FLLLLFIVGF---SVFAKKEVTLSSRGTIEATRVVDQIQSTSNSPIQVNHLKENKEIKKG 85

Query: 82  TPLLTFED----------IETTDLIDLKKVSIKNLRCHIDTEKSALDF-LNNKYDVLEKA 130
             L+ +++           +  DL+  ++  +K L+  I+T +S      +  YD L K 
Sbjct: 86  EILVEYQEDQEKQQGMSLTQQLDLLKKQEEQLKLLKTSIETGESQFTGNEHFGYDQLFKD 145

Query: 131 FESREEQLLDFLGKYHST------CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN- 183
           ++ +   L     + ++T       +      I    +  + +LT  RS+    L+  + 
Sbjct: 146 YQQQIAILQAQAHQQNATIASQNASASSSQAEIGQAIQDQEKRLTDYRSLKSALLEGRSL 205

Query: 184 -KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
             +  L +L  S+ +     +N  +  A   + L+ Q + +  S    R       +   
Sbjct: 206 DVTHPLYSLYQSYAQQPHGEEN-AQAQASFISQLDSQIQQLEASISNYRIQYAGSGSQQA 264

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
               L  +     A  L ++ +DL    +  AD  SKL   E   ++  IL+   G I  
Sbjct: 265 FSTSLDSQIASLKAQQLSKVGQDLLLLSQQIADLDSKLKTQETLLQKTQILAKDEGVIHL 324

Query: 303 NQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           N     ++   +  PL ++ P     K   I   +  K I  +  G    +RF      +
Sbjct: 325 NDETKGASIVTEGTPLAQVYPLIQKEKEVKIVTYIPSKDIATIHVGD--RIRFSTQGSKQ 382

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +     +  +I  I S      Q   +  E +L++ D         LR G   + +    
Sbjct: 383 KPIT--LEARISSIASSATRTEQGNFFKIEGVLRLKDQEAKL----LRYGLEGKCVLITG 436

Query: 419 NTTLAQEIIHPITDNWPKI 437
             +          D +   
Sbjct: 437 EKSYFSF----FVDQFLGA 451


>gi|320108071|ref|YP_004183661.1| secretion protein HlyD family protein [Terriglobus saanensis
           SP1PR4]
 gi|319926592|gb|ADV83667.1| secretion protein HlyD family protein [Terriglobus saanensis
           SP1PR4]
          Length = 415

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 55/374 (14%), Positives = 119/374 (31%), Gaps = 17/374 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            +  +V +    SG I +  V++   + +G  +   +  +    +D    ++K  +    
Sbjct: 52  VDGRLVPVSPKISGYISELLVDDNQIVHKGAVIARIDPRDAQVRVDQALAALKVAQAQAA 111

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           +  S +              E+          +  +T  K  +   S +  ++     R 
Sbjct: 112 SSLSDVPLTAGVTGSAVAGAEANLADARAEYARARATSEKAHHADTSLISANVA---DRQ 168

Query: 172 RSIYLNRLDLENKSSLL-RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            +    R DL     L  +  +S  Q D  +   L  K   SQ +  QQ       T ++
Sbjct: 169 ANYERTRADLARMKDLADKHEISHLQYDRFVADELMAK---SQLEAAQQSLASQGGTAQI 225

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            + I +         +    A       +   S+D +  Q       + L   +      
Sbjct: 226 SDAIVQAAAARVQQAQAQLSAAHTNRGQVGMRSQDADAMQAAVLAAHANLDAAKLQVSYT 285

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I++P  G +   ++  +  Y    Q L+ +VP     ++ A     Q+++V  G    V
Sbjct: 286 EIIAPQEGKVTR-RTVEAGAYVAPGQTLLTLVPTRD-VWVTANFKETQLRNVHGGERVEV 343

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE------VILKITDLAFSDNNIE 404
           +             ++       +S       T  + +      V + +   A S N + 
Sbjct: 344 KVDQLGRTFSGHVASVSNATGSRLSLLPPENATGNFVKIVQRIPVKIALDPEAVSSNALS 403

Query: 405 LRNGFPAEVLFTAK 418
           +  G   +V    +
Sbjct: 404 V--GANVDVTIHTR 415


>gi|294667524|ref|ZP_06732740.1| membrane-fusion protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292602753|gb|EFF46188.1| membrane-fusion protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 331

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 89/297 (29%), Gaps = 20/297 (6%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             +       +SV    ++ + +   +      L  + + L   + +          L+E
Sbjct: 28  QIASKLQQLKASVESQQRLSVLKEHDLRDRIELLRARIATLTLQIKNQDIRYKAANALYE 87

Query: 208 ------KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
                    VS   L QQ    Y + L+ +    + +N         +++  E       
Sbjct: 88  TWRTKASGLVSGYQLAQQ----YDTALQQKSLAQDVRNQRLQAMLELNQSEAELIQLPHI 143

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               +       AD  ++    E+ R Q  I + + G +V   +        ++  L+ I
Sbjct: 144 TGERIVALNVQIADVENEKAENEQRRSQ-VIHASMDGIVVNVLAH-PGMAVDEASQLLVI 201

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ---- 377
           +P +             +  ++ G    + +  +   R  + +  I  I           
Sbjct: 202 LPRNSKLVAELWAPGSAVGLLQVGKPVDISYDAFPAARYGRQRGKIISISTNAVSALEIG 261

Query: 378 --DNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
               N Q    Y +I+ I D + S        + G         +  +L   ++ P 
Sbjct: 262 RILGNAQPSSGYRMIVAIDDASSSSFLRRFAAKPGMTLTAKVDVETRSLIDWMLRPF 318


>gi|288818251|ref|YP_003432599.1| periplasmic component of efflux system [Hydrogenobacter
           thermophilus TK-6]
 gi|288787651|dbj|BAI69398.1| periplasmic component of efflux system [Hydrogenobacter
           thermophilus TK-6]
 gi|308751848|gb|ADO45331.1| efflux transporter, RND family, MFP subunit [Hydrogenobacter
           thermophilus TK-6]
          Length = 407

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 87/275 (31%), Gaps = 38/275 (13%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +F   +     S++     +         LE      +A+L   ++DL   K L+EK+
Sbjct: 91  PSLFLAQLQQGRASVETAKANLEKERRTMQVLEANLEGAQAVLEKARRDLQRAKYLYEKS 150

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +S++D++  ++    +   +     + +     I    ++     AN            
Sbjct: 151 LLSESDMDVAQQSYKSALANVEAIKAQIEAQRLAIKSAENQLKQALAN------------ 198

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSK 326
                     ++I E       I+SP+ G ++             S     L  I     
Sbjct: 199 ----------MSIAETNLRYTKIVSPVDGIVITKNV-EVGQTVAASFQTPTLFLIAKDLS 247

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A V+   I  +K+G         Y     +   + + ++ P+  Q          
Sbjct: 248 KMQVEATVSEADIGKIKEGQEVEFTVDAYPGRVFRGRVSQV-RLSPVNIQNVIT------ 300

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           Y VI+ + +         L+ G  A V F     T
Sbjct: 301 YTVIIPVDNSHML-----LKPGMTANVSFLVAKKT 330



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 103/310 (33%), Gaps = 33/310 (10%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS++G I     V  + S  SG I     +  S++ +G  L   +       +   + S+
Sbjct: 47  VSATGTINPVATV-IVGSQVSGKIVAIYADYNSRVRKGQVLAEIDPSLFLAQLQQGRASV 105

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  + +++ E+  +  L    +  +   E     L     KY    S +    +    +S
Sbjct: 106 ETAKANLEKERRTMQVLEANLEGAQAVLEKARRDLQ--RAKYLYEKSLLSESDMDVAQQS 163

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            K  L  + +I   +  +E +   +++  +  ++ L  M ++ E N      ++  + IV
Sbjct: 164 YKSALANVEAI---KAQIEAQRLAIKSAENQLKQALANM-SIAETNLRYTKIVSPVDGIV 219

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
               +E+ + +              D + ++    + E      +  +     +      
Sbjct: 220 ITKNVEVGQTVAASFQTPTLFLIAKDLSKMQVEATVSEADIGKIKEGQEVEFTVDAYPGR 279

Query: 284 EKTREQKTIL-SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                   +  SP+   I    +++             I+P      +           +
Sbjct: 280 VFRGRVSQVRLSPVN--IQNVITYTV------------IIPVDNSHML-----------L 314

Query: 343 KKGYTATVRF 352
           K G TA V F
Sbjct: 315 KPGMTANVSF 324


>gi|227832149|ref|YP_002833856.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
 gi|262183999|ref|ZP_06043420.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
 gi|227453165|gb|ACP31918.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
          Length = 536

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 61/417 (14%), Positives = 132/417 (31%), Gaps = 53/417 (12%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            SVS++G +  E  +    S   G I+    + G ++     L   +  ET   ++ ++ 
Sbjct: 51  SSVSATGTVSAERELSLTTSLT-GPIQSLDAKVGDRVEAQQLLGRMDTTETERELEAQRT 109

Query: 102 -----------SIKNLRCHIDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGKYHST- 148
                       I++ +  +   + +LD  LN + +  + A  S + +  +   K     
Sbjct: 110 SQEAGKLEAVHQIEDAQLQLRQLQDSLDQGLNPEVNSAQSAVNSAQTEYAEAQRKLDDAL 169

Query: 149 -----CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE---------NKSSLLRALLSS 194
                  +V     +       ++    +S       +          N +S   + L S
Sbjct: 170 ATKGDRPEVAEARAAVEQARSGVRDAESKSFQSALASIGTATEDPSGINTASAFLSYLDS 229

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            +      + L +        L   +R + +       +     +  R +         +
Sbjct: 230 DEAVQDSERQLKQSEESYGRVLRGIDRELGEQQRATAASYQAVADAERALQASNLAIEQQ 289

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            ++  + ++  +E      A+   +   LE    Q  + SP+AG +              
Sbjct: 290 ISSQSQAVNHAVETAASASANNAKENGPLEYRLSQADLRSPLAGVVTAVN----GEAGMP 345

Query: 315 SQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           ++ P++  V       +++ V    I  +K G   T  F        K+FK  +  I P 
Sbjct: 346 AEGPILT-VADDSSLLVKSTVKEGDIARIKVGDEVT--FTS-PSSPGKEFKGKVTFISPT 401

Query: 374 ISQQD-----------NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             Q D               ++  + V +++       N   LR G   +V    K 
Sbjct: 402 AEQPDAEAGAGGGSGKPTGSSKPEFPVHIRVD-----GNREGLRLGSTTKVRIITKK 453


>gi|257453845|ref|ZP_05619123.1| multidrug resistance protein A [Enhydrobacter aerosaccus SK60]
 gi|257448772|gb|EEV23737.1| multidrug resistance protein A [Enhydrobacter aerosaccus SK60]
          Length = 431

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 51/350 (14%), Positives = 105/350 (30%), Gaps = 56/350 (16%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L ++ I  +  W  +      VS+  +     N V+I +  SG +    V +   +  G 
Sbjct: 41  LIVLAIAAVTLWLYVTQWRYQVSTE-DAYVSGNQVQINAQISGTVTAIGVNDTDMVKAGQ 99

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L+  +  +    ++  K  ++       T+ +                           
Sbjct: 100 TLVALDQADNGLALETAKAQLRTAIRQYKTQTA--------------------------- 132

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                               S++     +        +++++    +  L + Q D    
Sbjct: 133 --------------------SIQQADVNISQAQTAMNEVQSQIESAKIALLAAQSDYQRR 172

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             L    AVSQ ++      V K+  +L   + +Q      +     + N+  AN  K  
Sbjct: 173 AALMASQAVSQEEVQHAADTVKKAQAQLDAAVAKQATARSAVVTAQAQRNVTVANLGKND 232

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
                 +Q      M+ +        +  I++PI G I                PLM IV
Sbjct: 233 VL----SQPAVQTAMANIQTAWLNLNRTQIVAPIDGQIAKRGV-QLGQKISAGTPLMVIV 287

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           P     ++ A     QI+ +  G    +    Y   +E  +   +  +  
Sbjct: 288 PLHD-LWVDANFKESQIKDIHLGQAVNLTSDIYG--KEVVYHGKVIGLSA 334


>gi|254412525|ref|ZP_05026299.1| ABC exporter membrane fusion protein, DevB family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196180835|gb|EDX75825.1| ABC exporter membrane fusion protein, DevB family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 463

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 47/348 (13%), Positives = 122/348 (35%), Gaps = 46/348 (13%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFS----GIIKKFQVENGSQILQGTPLLTFEDI-ETTDLI 96
            +V++ G +     V+ I +P S     ++K   V  G ++ +   +   ++       +
Sbjct: 54  EAVTALGRLEPAGEVITISAPTSLEGASVVKSLLVSEGDRVRENQVIAIMDNRDRLQASV 113

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           DL K  ++  + +++  K+       K   ++   E+      +  G+  +  SK+    
Sbjct: 114 DLAKKQVEIAQANLERVKAGA-----KAGAIQAQKETINRLDKELEGETKAQQSKINRLE 168

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            + +  + K +   +++        E     L A   +   D T  + L E  A+S ++L
Sbjct: 169 -TELRETTKAQEATIQAQQATVKGQEATIRRLEAEKRNADNDFTRYQQLAEDGAISTSEL 227

Query: 217 NQQERIVY---KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS---------- 263
             +   V    +   E +EN+ +Q+  L        +        L+E            
Sbjct: 228 ESRRLRVETALERLSEAQENLSQQQAHLIQAEANKAQTIANLNEQLEEARVNRNKTIAIL 287

Query: 264 -------------------RDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYN 303
                               D++Q +      ++ +   +   +    + +   G I+  
Sbjct: 288 EARIKEEEARLEEIQEIRPVDIKQAEAEVESTLAAVEQAQADLDSLAYVRASEDGRILEI 347

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
            + +     ++ + ++++    ++  + A+V    I  V+ G    +R
Sbjct: 348 NTRA-GETIKEGEGIVELGKTDEMIVV-AEVYESDISQVRLGQRVAIR 393


>gi|284037576|ref|YP_003387506.1| secretion protein HlyD [Spirosoma linguale DSM 74]
 gi|283816869|gb|ADB38707.1| secretion protein HlyD family protein [Spirosoma linguale DSM 74]
          Length = 369

 Score = 86.2 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/368 (11%), Positives = 107/368 (29%), Gaps = 48/368 (13%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + +V  +     G +K  + ++   + +G  L+  +D +    +   + ++++       
Sbjct: 41  DGDVNPVIPKAGGYVKAIRFKDNQFVKEGDTLVVLDDADYRIRVAQAEAALQSAMAAAGV 100

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +S                     Q+        S+ + V             +   + R
Sbjct: 101 SRS---------------------QVSVASATIQSSQASVLTARNQVATAQANVTAAQAR 139

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +   N+                   D      L  +  V Q   +  +     +  +L+ 
Sbjct: 140 ARKANQ-------------------DFERYSRLLAEKTVPQQQFDAVQAERDAAQAQLQA 180

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + +     +     +  +  +         +   Q       ++L +         +
Sbjct: 181 AQAQLQTAQAQVAAAGTQTGVTSSQRRA-TEGQISVAQAAIKQRQTELDMANLQLSYTIV 239

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P++G +V  ++       Q  Q L  IV  +   ++ A     Q++ ++ G    V  
Sbjct: 240 RAPVSG-VVSKRAVQVGQLVQPGQALCSIV-GNTSLWVTANFKETQLKQMQPGQKVEVDV 297

Query: 353 PHY-ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN----IELRN 407
             +  D    +  +         +    +  T  Y +V+ ++      D N      LR 
Sbjct: 298 DAFEGDKLVGQVGSFAGATGAKFTLLPPDNATGNYVKVVQRVPVRIELDKNSPLYARLRP 357

Query: 408 GFPAEVLF 415
           G  A V  
Sbjct: 358 GMSATVAV 365


>gi|158338145|ref|YP_001519321.1| secretion protein HlyD [Acaryochloris marina MBIC11017]
 gi|158308386|gb|ABW30003.1| secretion protein HlyD [Acaryochloris marina MBIC11017]
          Length = 469

 Score = 86.2 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 43/358 (12%), Positives = 97/358 (27%), Gaps = 41/358 (11%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I++  V+ G ++ QG  +   +D      +   +  +     ++    +         
Sbjct: 59  GVIEQLLVQEGDRVRQGQLMAIMDDANLRGQLIQVQGQLAQQEANLQRLLAG-------- 110

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   +R E +     +     +++      S  + +     R++         E  
Sbjct: 111 --------NRREDIAKAKAQLTEARAQLQQLQSGSRPQEVAQAEARLQQAQATLKLRETD 162

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               + L  +                V++N + + E+ +       R    E       +
Sbjct: 163 WQRYQQLYQAGAVSRESRDQKRTDRDVAKNQVREAEQALALQQAGPRS--EELTQAEARV 220

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +         A    E   D+ Q +         L  ++       IL+P  G I    
Sbjct: 221 TQQEQTLAALQAGNRTE---DIAQARAQVLSAQGSLATIQAQLRDAKILAPFDGVITQIY 277

Query: 305 SFSSSNYAQQSQ--------PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +     +   S             +   S    +   ++  QI  VK      V+     
Sbjct: 278 AD-VGAFVSPSMAGSGISASSSSILTLASDRYEVVVNLSEAQIAQVKLDQKVNVKIDALP 336

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
                     + +I P  +   N       +EV + +          +L+ G   E  
Sbjct: 337 KT---PLTGTVSQIAPQATVTQNVTS----FEVRVTLPSTTTE----KLKVGMNVEAD 383


>gi|172037903|ref|YP_001804404.1| hypothetical protein cce_2990 [Cyanothece sp. ATCC 51142]
 gi|171699357|gb|ACB52338.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 489

 Score = 86.2 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 53/389 (13%), Positives = 121/389 (31%), Gaps = 35/389 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + + +SG +   ++V  I     G + + +VE G ++ +G  L   E  E        
Sbjct: 56  LAVDIEASGVVEPIESV-NISPKNPGRLVQLRVEQGMKVKEGQILALMEHSEDKAQGKFA 114

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV-FNYGIS 158
           +         ++  K  +              E ++ Q      +     +K        
Sbjct: 115 EAKYNQALADLEAAKVRIPS------------EVQQAQTRYVQAQTQLEQAKANLQRATE 162

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            + + +     ++ S         ++      LL            L      +Q  L +
Sbjct: 163 RIPKEIDQIKAQIVSAQSGLELAASRVKRNEELLREGAITQDRFDELLNNYNNAQASLME 222

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            ++ + ++T      I + K  + H      EA ++     +    D+   +       +
Sbjct: 223 LQKRLEQTTQTQNPEIDQLKQEVLHAQATVAEAQIQLEERKRTAKIDITSLELAAEAAKA 282

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYI 330
           +L  +    +   I +P  G +    +     +           S     I+  ++   +
Sbjct: 283 ELEQMVIQFQDTAIRAPFDGIVTQKYAN-PGAFVTPTTSASSTASATSSSILALARGLKV 341

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            AKV    I  +++    T+    Y +     FK  +  I P    +DN       +EV 
Sbjct: 342 VAKVPEVDIAMIQQSQPVTITADAYPNE---VFKGQVVLIAPEAVVEDNVTS----FEVT 394

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +     A  +   +L +    +V F  + 
Sbjct: 395 I-----ALMEGQDKLLSRMNVDVNFLGQE 418


>gi|124006402|ref|ZP_01691236.1| HlyD family secretion protein [Microscilla marina ATCC 23134]
 gi|123988059|gb|EAY27730.1| HlyD family secretion protein [Microscilla marina ATCC 23134]
          Length = 417

 Score = 86.2 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 48/369 (13%), Positives = 116/369 (31%), Gaps = 63/369 (17%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + L +          +     I  L+ WS    +  +V   G ++    + +I S  SGI
Sbjct: 24  QELVQVTSTRSWLALIALGGLIFALLLWSFFGELPKTVRGKGILIQSGGIADITSMGSGI 83

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V  G  + +   +                V+   LR  I+  +  L +L  K   
Sbjct: 84  VGQVLVREGESVSKNDTIAI--------------VAQPELRLQIENAQEKLTYLKEK--- 126

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE-NKS 185
                                  +++ NY I S          R + +   +  LE N+ 
Sbjct: 127 ----------------------RNRIINYTIKS---------ARKKQLLKAKYALEDNEQ 155

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             ++ LL   +     ++ L ++  + + ++++   I   +    +      + +L+  N
Sbjct: 156 GKIKRLLKQQELKFKNLELLLQRKRIPKAEVDKAHLIYLTT----KTRYDSLETVLQRYN 211

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +            L+ +  D+   +   ++   K  +L        I S   G ++   +
Sbjct: 212 QQIFALPGVKDQELETLESDINDLRGNISEMNVKFNLL------TYIKSSYEGKVIELMA 265

Query: 306 FSSSNYAQQSQPLMKIVPHS---KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                  +Q  P++ +       +       + P+  + V +G    +            
Sbjct: 266 -KKGQLVEQGAPIISLEVEDHKYEGLEAVIYIPPEDGKKVAQGMEVKIAPTTVKIEETGY 324

Query: 363 FKAIIEKID 371
            K  + ++ 
Sbjct: 325 IKGKVVQVS 333


>gi|325841068|ref|ZP_08167251.1| efflux transporter, RND family, MFP subunit [Turicibacter sp. HGF1]
 gi|325490085|gb|EGC92429.1| efflux transporter, RND family, MFP subunit [Turicibacter sp. HGF1]
          Length = 519

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 133/367 (36%), Gaps = 37/367 (10%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD-------- 118
           I +  V+ G ++  G  + T  +    D ++     ++     + + K+           
Sbjct: 103 IGELFVKEGERVSIGDKIATISEKFINDKLEELNSQLERATATLVSTKNNKQVTVLNQNK 162

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK--MKLTRMRSIYL 176
              +K    +  +ES+   L++ + +     + V N  +  V R ++    L   R++  
Sbjct: 163 AWEDKVQGSKNQYESQRNSLVNNINQLTDKLNDV-NKKLEDVRRQIEEMQNLATARNVDE 221

Query: 177 NRLDLENK----SSLLRALLSSHQKDLTMMK------NLFEKNAVSQNDLNQQERIVYKS 226
           N +  EN     ++LL+    + + D   ++       L E   +S+  L + E  +  +
Sbjct: 222 NHVLQENSTVEDTNLLQESDETKESDAEEIEAKLQELKLTESTLLSEKSLLETE--IKNT 279

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     E+        +         A    E+   +   Q+       ++  + K 
Sbjct: 280 NQSLNSLDVERTKEKESEVKEESANREINALTNSELDHSINNAQKEVDKINEQIAKVNKL 339

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           +E  T+ + I GTI+    ++  +      P++ I   +   +    VT ++I  +++G 
Sbjct: 340 KENSTLYAQIDGTILNLN-YTVGSTTSSEIPIVTIG-ENAKVFAEITVTQEEITKIEEGQ 397

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              +    Y D      +  +  I    + + N   +   Y V+++I+      N+++L 
Sbjct: 398 RVNLIVSAYQDQ---MLEGTVSFI----NLKPNGQGSSVNYSVMVEIS-----GNDLKLL 445

Query: 407 NGFPAEV 413
            G     
Sbjct: 446 EGMTVSA 452


>gi|260552465|ref|ZP_05825841.1| multidrug resistance secretion protein [Acinetobacter sp. RUH2624]
 gi|260405272|gb|EEW98768.1| multidrug resistance secretion protein [Acinetobacter sp. RUH2624]
          Length = 383

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 56/371 (15%), Positives = 112/371 (30%), Gaps = 65/371 (17%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           +I S  SG + +  V +   + +G  L+  +D +    +   +  +   +       +  
Sbjct: 68  QITSMVSGQVAQVLVNDTQTVHRGDVLVRIDDRDAKIALAQAEAELAKAKRQYKQTAANS 127

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             LN++  V      S + Q+      Y     ++                         
Sbjct: 128 SSLNSQVVVRADEINSAKAQVAQAQADYDKAALELNRRA--------------------- 166

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIH 235
                                      L    AVS+ +L + +  V   K+ LEL +   
Sbjct: 167 --------------------------QLAASGAVSKEELTKAQSAVETAKAGLELAKAGL 200

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            Q    R   E    AN      + E S              + +   +   E+  I +P
Sbjct: 201 AQATSSRKAAESTLAANEALIQGVSETST------PDVQVAQAHVEQAQLDLERTVIRAP 254

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G I   ++            +M IVP +   Y+ A     Q++ V+ G   T+    Y
Sbjct: 255 VDGVITR-RNIQVGQRVAPGSSMMMIVPLND-LYVDANFKESQLKKVRPGQPVTLTSDLY 312

Query: 356 AD-----IREKKFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRN 407
            D      +   F         +I  Q+      +  +   V + +     +++ + +  
Sbjct: 313 GDDVEYHGKVVGFSGGTGSAFALIPAQNATGNWIKVVQRLPVRIALDPKELAEHPLRVGL 372

Query: 408 GFPAEVLFTAK 418
              A+V  +AK
Sbjct: 373 SMEAKVDLSAK 383


>gi|332711858|ref|ZP_08431788.1| RND family efflux transporter, MFP subunit [Lyngbya majuscula 3L]
 gi|332349186|gb|EGJ28796.1| RND family efflux transporter, MFP subunit [Lyngbya majuscula 3L]
          Length = 509

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 108/304 (35%), Gaps = 14/304 (4%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           GE+   + +  IKS   G+I++ +V  G ++  G  +   +  +    +   K  +   +
Sbjct: 86  GEVEASEKI-TIKSQVDGVIQQVKVREGDRVKPGMTIAILDGADQQLALAQAKARLAQEK 144

Query: 108 CHIDTEKSA-LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            ++   +      +  +      A ++RE++  D L    +    +    I+     L  
Sbjct: 145 SNLARLQVGTRPEILAQRQAELDAAKAREQEAKDNLDGMIAVQPNL----IAQRQAELDG 200

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R +    N   +E  +        +  +          +   +Q  L+ ++    + 
Sbjct: 201 AQAREQEAKDNLKRIEALTLEGALSERAKVEAEKAADAATSERLRAQAALSAEQTKTQQE 260

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             E R  +    +    I  L  EA +           +++  +   A  ++ +   +  
Sbjct: 261 IAEARSTVDATISERLRIAALLAEAQVGPTQ------EEIDAQKGVVAAAVAAVEQAQLA 314

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            E+ TI +PIAG +   Q  +  NY +    ++ +V ++    I  +V  K    VK G 
Sbjct: 315 SERATIKAPIAGVVQSRQVDT-GNYVEGGDAIITLV-NNAQFDIFLQVPEKFTNQVKPGM 372

Query: 347 TATV 350
              +
Sbjct: 373 YVEL 376


>gi|159030605|emb|CAO88270.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 494

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 48/388 (12%), Positives = 124/388 (31%), Gaps = 33/388 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + + +SG +    +V  I     G + +  V+ G  + +G  L   +++E        
Sbjct: 56  LAVEIKASGRVEPIQSV-NISPKNPGRLVRLLVDQGMIVKKGQTLAVMDNLEVYAQGMQS 114

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  ++     ++  K ++     +        ++  +QL   L +      K  +   + 
Sbjct: 115 EARLREALASLEQAKRSIPEDIRQLQARFYQAQASYKQLEARLAQAKERIPKDLDQLQAQ 174

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V  +          +  N   +   +       +   + L    NL E        + + 
Sbjct: 175 VQAAQSRFRLAENRVKRNENLVREGAIAQDQFDAVLNEYLNAKANLDES-------IRRL 227

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E+    ++ E+       +  +        EA        K    +L + + + A   + 
Sbjct: 228 EQADKTASPEVAG----IEQEMIRAAAAIAEAKFALEQRQKTQETELARLESSVAAARAS 283

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYA--------QQSQPLMKIVPHSKLTYIR 331
           L  ++       I +P  G +   +  +  ++           S     I+  +    + 
Sbjct: 284 LEQIKIQYRDTVITAPFDGIVTQ-KYATEGSFVTPTTSASSTASATSTSIIALASGLEVI 342

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           AKV    +  +++G    +    +    E+ F+  +  + P    +DN       +EV +
Sbjct: 343 AKVPEVDVGLLQRGQPVQIVADAFP---EEVFEGRVILVAPEAIIEDNVTS----FEVRI 395

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
                       +L++    +V F  + 
Sbjct: 396 -----GLVTGRDKLKSKMNVDVTFVGQQ 418


>gi|83591496|ref|YP_425248.1| secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
 gi|83574410|gb|ABC20961.1| Secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
          Length = 390

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 58/374 (15%), Positives = 108/374 (28%), Gaps = 82/374 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + ++  I    SG + +  V +   +  G  L+  +  +        +V +   R + + 
Sbjct: 66  QGDITAIAPKVSGYVDEVAVGDNEVVSAGQLLVRLDSADY-------RVQVDQARANAEG 118

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           + + L  +    D+ + A       +     ++                           
Sbjct: 119 KAAELASIIANIDLQQTAIAQARGAMDAAQARFDRAA----------------------- 155

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                                   KDL   ++L  + A S+  L+           ELR 
Sbjct: 156 ------------------------KDLARYQDLVGRGATSRQSLDSAREQATSGAAELRS 191

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                    + +  L  + +   A           Q QR  A+                I
Sbjct: 192 AAAALDGAQKRLAVLSADRDAAAAEVRS------AQAQRALAEI---------NLANTEI 236

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +PIAG +V N+   +  Y      LM IVP     +I A     Q+  +  G T  V  
Sbjct: 237 RAPIAG-VVGNRGVRAGQYVAPGSALMAIVPLEG-LWIAANFKETQLGAMAPGQTVKVEI 294

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIE 404
             Y+       +  +    P    Q         T  + +V+    ++I  LA    +  
Sbjct: 295 DAYSGRHG---QGRVVSFAPASGAQFSLLPPENATGNFTKVVQRVPVRIEMLADDPLSAL 351

Query: 405 LRNGFPAEVLFTAK 418
           +R G   EV    +
Sbjct: 352 MRPGLSVEVSVDTR 365


>gi|301793743|emb|CBW36130.1| ABC transporter BlpB [Streptococcus pneumoniae INV104]
          Length = 453

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 60/439 (13%), Positives = 144/439 (32%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEIAPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +             ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
              E          +++   ++      +T         +S   +++ ++T+++      
Sbjct: 132 GEDEFGYHNTFMNFTKQSHDIELGITKTNTEVSNQANLSNSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +     +++ + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIINNRARLPTGNPHQSILNRYLVASQGQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLNQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ SP  G +  N  F   N       + +I P    ++   I   V+   +  + KG 
Sbjct: 312 NTLTSPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGNHGT-TIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTTKKTYFDY 443


>gi|71065912|ref|YP_264639.1| multidrug efflux pump (emrA) [Psychrobacter arcticus 273-4]
 gi|71038897|gb|AAZ19205.1| probable multidrug efflux pump (emrA) [Psychrobacter arcticus
           273-4]
          Length = 467

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 63/419 (15%), Positives = 122/419 (29%), Gaps = 87/419 (20%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           K+    +L  +  L +IG+  LI ++  L P   ++  +     +     I    SG + 
Sbjct: 126 KKKSFFNLGLLIALIVIGV-ALILYAWKLPPFTPTMQQTNNAFVKGQTTIISPQVSGYVT 184

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  VE+ + +  G  L+  +D        + +  ++  + +ID   +            +
Sbjct: 185 EVAVEDFANVAAGDLLVKIDD-------RIFQQQLEQAQANIDIALTNRSSNAQDTGTSQ 237

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              ++RE  +        S    V  Y                                 
Sbjct: 238 AQIQAREADVYSAKVSVDSAREDVNRYQ-------------------------------- 265

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                           L    AVS+ D+   E  + K+   +++                
Sbjct: 266 ---------------GLVAIGAVSRADVAHAEAQLAKAQAGVQQA--------------- 295

Query: 249 DEANLEFANY-LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            EANL+ A    K+++           +  +     +   +   I +P +G +      +
Sbjct: 296 -EANLQVAKEGSKKMTASRSSLDANIKNAEAAAKQAQINLDNTIIRAPESGQLSQLTVQT 354

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Y      LM IVP        A     Q+ ++  G  AT+        +   F   +
Sbjct: 355 -GQYVTAGTQLMYIVPKGVWII--ANFKETQVANMTIGEAATIHVDALGGTQ---FSGRV 408

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAK 418
             I P    +      N  T  Y ++     ++I           LR G    V    K
Sbjct: 409 SNISPATGSEFSAGAANPATGNYIKIAQRIPVRIDLDPNQPELARLRPGMSVSVDVDTK 467


>gi|260460267|ref|ZP_05808519.1| secretion protein HlyD family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259033912|gb|EEW35171.1| secretion protein HlyD family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 364

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 89/320 (27%), Gaps = 27/320 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           LR  I +    L     + DV + A  S+   L       +    +     + +    + 
Sbjct: 42  LRADITSIAPKLAGYVVEVDVDDNASVSKGAVLFRIDDSDYKAKVEQAKANVDARRAEVA 101

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                 +         E +     A L   + +L     L +    S   L   +    K
Sbjct: 102 NIQASHKLQDALIAQAEAQKQSAAADLQFVRANLNRYVTLQKNGTASDQKLQDAQASYDK 161

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +   L             +  L                  L   Q   +   + L +   
Sbjct: 162 AKASLDGAEANLLAQRLKLGVL---------------EAQLSGAQAALSQARAALDLAML 206

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             +   + +P+ G IV N+      Y       + IVP   +  + A     Q++ V+ G
Sbjct: 207 DLDNTVVRAPVDG-IVGNRQIRVGRYVTPGNAALDIVPVDDIWIV-ANFKETQLKQVEIG 264

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSD 400
               V    Y D+   +   I+E   P           +  T  +  V+ ++   +    
Sbjct: 265 QRVRVTVDEYPDL---EIDGIVESFAPGSGAAFSLLPPDNATGNFIRVVQRVPVKIRMRR 321

Query: 401 NNI--ELRNGFPAEVLFTAK 418
           N +   L  G  A V     
Sbjct: 322 NPLPGRLVPGLSARVAIALG 341


>gi|302390685|ref|YP_003826506.1| efflux transporter, RND family, MFP subunit [Thermosediminibacter
           oceani DSM 16646]
 gi|302201313|gb|ADL08883.1| efflux transporter, RND family, MFP subunit [Thermosediminibacter
           oceani DSM 16646]
          Length = 538

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 71/414 (17%), Positives = 148/414 (35%), Gaps = 46/414 (11%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             + +SV +SG I     + E+     G ++K  V+ G ++ +G PLL   + ET   + 
Sbjct: 44  GNLTVSVKASGAIQPY-ELHELLPRSGGKVEKIYVKAGDRVKKGDPLLVLSNEETDISLQ 102

Query: 98  LKKVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESR------------EEQLLDFLG 143
             K+++   +  +D   SAL+   + +    L K    R              QL     
Sbjct: 103 KAKINVSQQKTALDEALSALENTEVRSPDKGLVKEITVRKGESVTKGAVVARLQLNPGKT 162

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +  +      I    ++  + L  + +      ++E + ++  +    +   + +  
Sbjct: 163 LVRAPFNGHQIKYIKPGQKAQVLFLDSLFTTEGVVKEVEERGAVQPSGAVFYYATVEISG 222

Query: 204 NLFEKNAVSQNDL-----NQQERIVYKSTLELRENI---HEQKNMLRHI----NELYDEA 251
           + + +   +  D+     N  E+ +    LE  E +    E    ++ I    N + DE 
Sbjct: 223 DYYIEGEETPVDVSIFTQNGTEQSLESVPLEPPELVDVKAEASGTVKEIYVKENAVVDEG 282

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               +   +E+ R++E  +++         +  + +EQ T  +P  GTIV   +      
Sbjct: 283 GRILSISSEEVDRNVENARQSLEQAQLDYQLRLRQKEQLTYTAPFDGTIVEVNASEGEEL 342

Query: 312 AQQS-----QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
            Q        PL+ IV       +   V       +K G  A +      D   K ++  
Sbjct: 343 VQSGSQESRDPLI-IVADYSKMKVVVSVDELDAIKIKPGMPAKITSDALPD---KTWEGT 398

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +E +  I + Q++       ++V +    +       ELR G    V    +  
Sbjct: 399 VEHVAEIGTVQNDVST----FDVTVVTKPIE------ELRAGMTVNVEIVMETK 442


>gi|330502897|ref|YP_004379766.1| secretion protein HlyD family protein [Pseudomonas mendocina NK-01]
 gi|328917183|gb|AEB58014.1| secretion protein HlyD family protein [Pseudomonas mendocina NK-01]
          Length = 349

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 109/308 (35%), Gaps = 8/308 (2%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E +   ++  +   +     +R E++L    ++      +     +    + +  L  + 
Sbjct: 35  ESTDNAYVQGEITRVSSQLNARIEKVLVRDNQHVEAGQLLAMLEDADFRLTRQRALAALE 94

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +    R   ++K     +L+++ Q D+   +   +++ +         +  Y S   +  
Sbjct: 95  THQAERAQAQSKLDQQASLIAASQADVAASQATLDRSRLDLGRAQTLRKPGYVSEERVTT 154

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + +     + +   +   +    +  +  +L++         + L   +    +  I
Sbjct: 155 LAADNRVARSQVAKAQADLQAQRQQ-VSSLEAELKRLDALILSAQADLEQADLNLSRTQI 213

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +PI+G +   +S       Q    L+ +VP     +I+A     QI  ++ G  A + F
Sbjct: 214 HAPISGMV-GQRSAREGQVVQSGAYLLSLVPDQD-IWIQANFKETQIGRMRPGQKAELLF 271

Query: 353 PHYADI-REKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRN 407
             Y D   E +  ++        S    +  T  + +V+    +K+T  A +     +R 
Sbjct: 272 DSYPDTPIEGRIDSLFAASGAQFSLLPPDNATGNFTKVVQRIPVKLTFAADNPLRGLIRP 331

Query: 408 GFPAEVLF 415
           G   EV  
Sbjct: 332 GMSVEVTV 339


>gi|209516915|ref|ZP_03265764.1| secretion protein HlyD family protein [Burkholderia sp. H160]
 gi|209502584|gb|EEA02591.1| secretion protein HlyD family protein [Burkholderia sp. H160]
          Length = 378

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/289 (11%), Positives = 85/289 (29%), Gaps = 22/289 (7%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+    + +    +  +  I +    ++    ++     N      +  + R  L   
Sbjct: 92  QPLVRLDTRQYQAALEQASATIDARNADIEHAKAQLTQQRANIAQAAAQEEVARVNLGHA 151

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q ++T    L    A +   L++ +    ++   +  +    ++    I           
Sbjct: 152 QDEVTRYTPLAATGAETAERLSELKSNRDQAQATVAADHAATESARSQIGA--------- 202

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                 ++  L Q         +     +   E   I S IAG +  ++S     + Q  
Sbjct: 203 ------VTAQLGQAHAQLEAARASAAQSQLDLENTVIRSSIAGRV-GDRSVRVGQFVQPG 255

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF-----KAIIEKI 370
             ++ +VP     Y+ A     QI  ++ G    +     +                 + 
Sbjct: 256 TRMLSVVPVQDT-YLTANFKETQIGRMRVGQPVEISVDALSGHTLHGVVDSFAPGTGSQF 314

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             + ++      T+    V ++I      + +  L  G         ++
Sbjct: 315 SLLPAENATGNFTKIVQRVPVRIHLETGPETHKVLLPGMSVTARVDTRS 363



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 52/190 (27%), Gaps = 18/190 (9%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDN-------VVEIKSPFSGIIKKFQVENG 75
           L++ G++G   W     +       G  +   +        V +    SG +    V + 
Sbjct: 32  LALAGLVGGAFWGGHWWL------VGRFIESTDDAYLTADSVTVAPKVSGYVTDVFVADN 85

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G PL+  +  +    ++    +I      I+  K+ L              E   
Sbjct: 86  QAVQVGQPLVRLDTRQYQAALEQASATIDARNADIEHAKAQLTQQRANIAQAAAQEEVAR 145

Query: 136 EQLLDFLGKY-----HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             L     +       +         +S +  +       + + +       ++   + A
Sbjct: 146 VNLGHAQDEVTRYTPLAATGAETAERLSELKSNRDQAQATVAADHAATESARSQIGAVTA 205

Query: 191 LLSSHQKDLT 200
            L      L 
Sbjct: 206 QLGQAHAQLE 215


>gi|258516077|ref|YP_003192299.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257779782|gb|ACV63676.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 505

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 62/394 (15%), Positives = 119/394 (30%), Gaps = 108/394 (27%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSG-IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           ++ ++G I     V    S  +  +IKK  V+ G  +  G  L               + 
Sbjct: 64  TIPATGTIEPVSTVSL--SFENAEVIKKIYVKTGDPVTAGQLLA--------------EQ 107

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
              +L+  +    ++L     K  +L+K                                
Sbjct: 108 EEDSLQAQLTQSSASLKSNAAKLALLKKG------------------------------- 136

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                      S        E+   + R+     +  L   + L  +  +SQ D +    
Sbjct: 137 -----------STEEEIAKAESSVKVARSAYELVKSKLDKNQKLLAEKVISQTDFDDINN 185

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               +   L++     K++ +                      ++EQ +       ++L 
Sbjct: 186 EFISAEGNLKQAEEALKSLQKG-----------------NRIEEIEQAEAQVESSNAQLK 228

Query: 282 ILEKTREQKTILSPIAGTI-----------VYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           I +K      ++SP+ G +             N + +SS           IV  SK   +
Sbjct: 229 IAQKDLAGTKMISPMDGIVSEVNGGEGQRATANNNSTSSGTG-------FIVLISKSLQV 281

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A+V    I  ++ G TA      Y +   K F   +  I P    +   +   + Y +I
Sbjct: 282 EAQVNEADIGKLEIGQTAEFTVNSYPN---KVFTGKVSSISP----EAETVSNVQVYNII 334

Query: 391 LKITDLAFSDNNIELRNGFPA--EVLFTAKNTTL 422
           ++           EL+ G PA   ++   K  TL
Sbjct: 335 IQ-----LEGEQQELKAGMPANLNIIINKKENTL 363


>gi|218508455|ref|ZP_03506333.1| HlyD family type I secretion membrane fusion protein [Rhizobium
           etli Brasil 5]
          Length = 141

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 13/137 (9%), Positives = 37/137 (27%), Gaps = 23/137 (16%)

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 I A +  + I  V  G  A ++   +   R       + ++      + +  Q 
Sbjct: 1   DDASLEIEAYLPNRDIGFVSPGQPAVIKVEAFPFTRYGILNGTVTRVATDAIPEPDAQQL 60

Query: 384 QE---------------------YYEVILKIT--DLAFSDNNIELRNGFPAEVLFTAKNT 420
           +                       + +++K     +      + L  G    V     + 
Sbjct: 61  EGQPAKELQSVIPIGNAQRVQNLVFPIVIKPDVASIDIDGTRVALSPGMSVTVEVKTGSR 120

Query: 421 TLAQEIIHPITDNWPKI 437
            + + +  P+ +   + 
Sbjct: 121 RILEYLYSPLAEIASEA 137


>gi|315498478|ref|YP_004087282.1| secretion protein hlyd family protein [Asticcacaulis excentricus CB
           48]
 gi|315416490|gb|ADU13131.1| secretion protein HlyD family protein [Asticcacaulis excentricus CB
           48]
          Length = 381

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/419 (13%), Positives = 125/419 (29%), Gaps = 65/419 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
              K N         L +++ +  L   +  + +     S+          ++ +   G 
Sbjct: 16  SPAKSNDRRRQLLTGLAAVVAVGVLGYGAYYMLVASHYVSTDNAYVGAETAQVNALVGGP 75

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V+    +  G  LL  +D +         +++++ R  + T +  +         
Sbjct: 76  VARILVKETQTVKAGDVLLVIDDADAN-------IAVQSARAALATAERRVMGYYANDKA 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L     +RE  ++       +  ++V                                  
Sbjct: 129 LGGQMGAREADIVRADAGIKAAEAEVNRTKF----------------------------- 159

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                      +    KNL    AVSQ ++   E     +      N++  +        
Sbjct: 160 -----------EFERRKNLATSGAVSQEEVVATE----SAYAAAIANLNAARAARIQAQA 204

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
               A     +    I+              ++L   E   E+  + +P+AG +   +S 
Sbjct: 205 ALASAEGNRQSNATLIAGVKPGENPEIMAARARLASAELELERTVVRAPVAGVVTR-KSV 263

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                 Q   PLM +VP S+  Y+ A     Q++ V+ G    +    Y      K+K  
Sbjct: 264 QVGQQVQTGTPLMSVVPISQA-YVDANFKEVQLKKVQPGQEVELTSDLYG--EGVKYKGK 320

Query: 367 IEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +  +           P  +   N ++  +   V ++I +     + + +     A++  
Sbjct: 321 VVGVSGGTGSAFSLIPAQNASGNWIKVVQRLPVRIQIDEKDLKMHPLRVGLSMKAKIDV 379


>gi|153954978|ref|YP_001395743.1| hypothetical protein CKL_2360 [Clostridium kluyveri DSM 555]
 gi|146347836|gb|EDK34372.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
          Length = 452

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 73/365 (20%), Positives = 125/365 (34%), Gaps = 75/365 (20%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           IIK+ +V+ G ++  G  L   +  +    I+  + S+K  +    T KS LD     YD
Sbjct: 76  IIKEIKVKIGDEVKSGDILALLDTKDLQKEIEQMEASLKTTQA---TNKSKLDNAQKAYD 132

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             EK                             S             ++   +LDL++K 
Sbjct: 133 NAEKL----------------------------SREGENSQIAAAEGAVNAAKLDLDDKK 164

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +                K LF+  A+S+ DLN+ E     +    ++   E    L +I 
Sbjct: 165 NTYE-----------DNKVLFQCGAISEQDLNKSEISFKNA----QDTYSESSVALNNIK 209

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +  +       +  ++     E   +  A E  K     +     T+L+P  G I     
Sbjct: 210 DKVNLDLNTAKSNYEQAKFLYEDKSQQIAIERKK-----QQFSDCTVLAPADGII----- 259

Query: 306 FSSSNYAQ--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            S +       S  L++I     +  I  +V    I  VK G    V+     D      
Sbjct: 260 SSVNGVEGNPASGSLLQIQSTDNIVAI-MEVKEADIDKVKNGQKVKVKTDSTGDKI---I 315

Query: 364 KAIIEKIDPIISQQDNNL--------QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +  I KI+ I  ++DN++          +  +EV +KI DL     N +L+ G  A    
Sbjct: 316 QGEIIKIEDIAKEEDNDMLKLKDDSNDEEAKFEVKIKIKDL-----NHKLKIGMKATADI 370

Query: 416 TAKNT 420
             +  
Sbjct: 371 ILEEK 375


>gi|15900443|ref|NP_345047.1| BlpC ABC transporter [Streptococcus pneumoniae TIGR4]
 gi|9798563|emb|CAC03518.1| BlpB protein [Streptococcus pneumoniae]
 gi|11611196|emb|CAC18583.1| ABC transporter [Streptococcus pneumoniae]
 gi|14972004|gb|AAK74687.1| BlpC ABC transporter [Streptococcus pneumoniae TIGR4]
 gi|156465156|gb|ABU67980.1| SpiD [Streptococcus pneumoniae]
 gi|156465187|gb|ABU68009.1| SpiD [Streptococcus pneumoniae]
          Length = 453

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 60/439 (13%), Positives = 144/439 (32%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEIAPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +             ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
              E          +++   ++      +T         +S   +++ ++T+++      
Sbjct: 132 GEDEFGYHNTFMNFTKQSHDIELGITKTNTEVSNQANLSNSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +     +++ + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIINNRARLPTGNPHQSILNRYLVASQGQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ SP  G +  N  F   N       + +I P    ++   I   V+   +  + KG 
Sbjct: 312 NTLTSPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGNHGT-TIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTTKKTYFDY 443


>gi|189423817|ref|YP_001950994.1| PAS/PAC sensor protein [Geobacter lovleyi SZ]
 gi|189420076|gb|ACD94474.1| putative PAS/PAC sensor protein [Geobacter lovleyi SZ]
          Length = 607

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/386 (13%), Positives = 119/386 (30%), Gaps = 89/386 (23%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  S++ +G++L    +V I SP SG + +  V  G  +  G PLLT +  E   +I  
Sbjct: 219 PVSSSIALTGKLLP-LQMVNITSPISGKVGQVMVRYGDVVKAGQPLLTMDTSE--AMIKY 275

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           ++     ++     ++  ++  +   DV                                
Sbjct: 276 REAKAAYIKAQNSYQQ--MEKWDASADVARA----------------------------- 304

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                        RS+   +L LEN+   L              + L++K  +   +   
Sbjct: 305 ------------HRSLAKAKLSLENQKKTLDES-----------ERLYKKGIIPATEYES 341

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +       ++ +    E K      N    +                  ++    +  S
Sbjct: 342 AKHQYSNQQMDYQSAQEELKAAQEKGNSENRKV-----------------SRFELENAES 384

Query: 279 KLTILEKTREQKTILSPIAGTI---------VYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           ++   EK     T+++P++G I            ++       QQ + L+ I        
Sbjct: 385 RMRQAEKDIASSTVVAPVSGIIMKPPASGQSKEGRTVERGTTFQQGELLLAIG-DLSGFS 443

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A++    +  V+ G    V    +     ++    I+ I P   + +       +  +
Sbjct: 444 VNARLDEVDVTKVQLGQKVRVSGDAFP---GQQLTGSIQSISPHAEEGEAGKSVSSF-GI 499

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
            + I  +        +  G  A +  
Sbjct: 500 KVVIDSVPPELKK-RIMVGMTANLEI 524


>gi|75909845|ref|YP_324141.1| heterocyst specific ABC-transporter, membrane fusion protein DevB
           [Anabaena variabilis ATCC 29413]
 gi|75703570|gb|ABA23246.1| heterocyst specific ABC-transporter, membrane fusion protein DevB
           [Anabaena variabilis ATCC 29413]
          Length = 434

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/336 (12%), Positives = 114/336 (33%), Gaps = 23/336 (6%)

Query: 44  VSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFED-IETTDLIDLK 99
           +++ G +  E  V+ + +P       + +  VE G ++  G  +   +        +   
Sbjct: 57  ITALGRLEPETEVISLSAPLALDGDRVAQILVEEGDEVQAGQVVAILDSRARLQTAVLQA 116

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  I+  +  ++  K+     + +        ++  E+L        +   +      + 
Sbjct: 117 EKQIRVAQAKLNQVKAGAKTGDIRAQ------QASVERLQAQSQGDRTGQQQTIARIEAQ 170

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                  +   +R +     + E +    + L S      + +         ++  L++ 
Sbjct: 171 WQGDRIAQEATIRKLEAELKNAEAEYQRYQQLYSEGAISSSAIDTRRLSVETAKEQLDEA 230

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLEQNQRTFAD 275
           + ++ +      + + E K  L  IN   ++   E    L  I+     D++  Q    D
Sbjct: 231 KAVLNRINSTASKELAEAKVALNRINATSNKQISEAKATLTSIAEVRPVDVQAAQTEVED 290

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFS-SSNYAQQSQPLMKIVPHSKLTYIRAKV 334
            ++ L       E   I +P AG I   +  +       ++  +  +   +++  + A+V
Sbjct: 291 AIASLKRATTDLEAAYIRAPQAGQI--LKIHTRVGEKISENG-IADLAQTNQMLAV-AEV 346

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
               I  VK G  A +    +      + +  + +I
Sbjct: 347 YQTDIGKVKLGQQAAITSQAFG----GELRGKVSQI 378


>gi|282850661|ref|ZP_06260040.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Veillonella parvula ATCC 17745]
 gi|282580154|gb|EFB85558.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Veillonella parvula ATCC 17745]
          Length = 346

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 72/408 (17%), Positives = 128/408 (31%), Gaps = 97/408 (23%)

Query: 19  RMTLLSIIGIIGLITW----SILLPIEISVSSSGEILNEDNVVEIKSPFSG--IIKKFQV 72
            +T L I+G +G   +    + +      +   G +    N+ E+   F G   I    V
Sbjct: 23  MITFLIILGGVGYYAYNQYEAYMA--SHHIVLQGNV----NLREVNVAFRGSDRIASLLV 76

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G+ + QG  L      E    +   K +I   +  +D  ++                 
Sbjct: 77  DEGAVVSQGQILGYLHSDELNLAVQQAKATIAAQKAIVDKLQAG---------------- 120

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
                                     S    +     R+ S        + ++  L+   
Sbjct: 121 --------------------------SRPEEIAQASARVTSAEAALAQSKQEAEKLQKSY 154

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           ++               AVS+  ++  +  V  S  +L              NE     N
Sbjct: 155 NASNG-----------KAVSRQSVDDIQAKVKVSEAKL--------------NEAQQAYN 189

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           L  A   +E   D+ Q Q       S+L   E    Q  + +PI G I   +     + A
Sbjct: 190 LAVAGPRQE---DIAQAQAQLDSMKSELARQEFLLNQTVLTAPIDGVITA-RLLQVGDMA 245

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             S P+ K+   +   ++R  V  + +  +  G  A V    Y +         I  I  
Sbjct: 246 SPSTPVFKLA-ENTKKWVRVYVNERDLGKIYNGMAANVTTDTYKNE---PIHGTIGYISS 301

Query: 373 II-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +      S +  +++T   YEV + + D    DN + L  G PA V  
Sbjct: 302 VAEFTPKSVETEDVRTTLVYEVRVYVDDP---DNRLRL--GMPATVSI 344


>gi|288802859|ref|ZP_06408296.1| HlyD family secretion protein [Prevotella melaninogenica D18]
 gi|288334676|gb|EFC73114.1| HlyD family secretion protein [Prevotella melaninogenica D18]
          Length = 325

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 110/284 (38%), Gaps = 18/284 (6%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + + L    +  +T ++      S +  + +      ++    +LDLE + + +R  +++
Sbjct: 53  DSRQLSLKREQLATSNEQLTATHSQLEANKRQLEANRQATASRQLDLEKQVASIRQQIAN 112

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q++      L +  AV +  ++  +  +      L++ +   +  +   N    E N  
Sbjct: 113 QQRERERFSELLKDGAVPRKQVDDIDYQIQV----LQKQLVATQEQIASQNTSLAEQNKG 168

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A  +  IS          A   ++   ++       + SP+ GT++  +      +   
Sbjct: 169 LAAQMDGISSQQTGVSAQQAGVRNQQAQIDDQIAHTFVKSPLTGTVLE-KYVEQGEFVSV 227

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            +PL KI   +K  Y+RA +T +Q+++VK G    V    Y    +K++  ++  I    
Sbjct: 228 GKPLFKIA-DTKRMYLRAYITSEQLKNVKLGQKVKV-IADYGGGEKKQYDGVVTWISSRS 285

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                S   ++ +    Y + ++  +  ++        G   EV
Sbjct: 286 EFTPKSIVTDDERADLVYAIKIQFQNDGYAKI------GMYGEV 323


>gi|209525572|ref|ZP_03274111.1| efflux transporter, RND family, MFP subunit [Arthrospira maxima
           CS-328]
 gi|209494071|gb|EDZ94387.1| efflux transporter, RND family, MFP subunit [Arthrospira maxima
           CS-328]
          Length = 514

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/351 (13%), Positives = 106/351 (30%), Gaps = 54/351 (15%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I++  V  G  + +G  +   +D      ID     +++    +   ++ L         
Sbjct: 132 IQQVLVNQGEMVTEGQVMAVLDDSVLRSQIDQANAQVESANSLVRQREANLGQAQAGLAQ 191

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            + +    E  L     +                                          
Sbjct: 192 AQASLLEAESLLTQNQARLAEA-------------------------------------- 213

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +A L   ++++   ++L  +  VS+ +L  +      +   +R       +    I+ 
Sbjct: 214 --KANLDQARREVERYEDLSSQGVVSRQELETRITTAKTAEEGVRVAEANISSARATISS 271

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                    AN       ++   +       +++  LE  REQ  + +P++G +   Q  
Sbjct: 272 ARANIGSAEANVES-AESNIRSAEAEVRSAQARVRQLETQREQTIVRAPMSGIV--AQRT 328

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       +Q L  I+       + AKV   Q+  V+ G   TV         +   + +
Sbjct: 329 ARVGDVTGNQQLFSII-AENQLELHAKVPETQLSQVRIGAAVTVTSDA-DQNLQ--VRGV 384

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           + +I P+I  Q           V + +  L    ++  LR G       T 
Sbjct: 385 VREIAPLIDPQSRQAT------VKIDLPPLGAIRDSF-LRPGMFLRAAITT 428


>gi|320449353|ref|YP_004201449.1| secretion protein HlyD [Thermus scotoductus SA-01]
 gi|320149522|gb|ADW20900.1| secretion protein HlyD [Thermus scotoductus SA-01]
          Length = 429

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 91/297 (30%), Gaps = 29/297 (9%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           K  E   E   D   +   +         +S+  +     + + S+     + E   +  
Sbjct: 80  KVGEVLAELDPDPFRRAWESARADLQRAEASLANARAQGESSLASLQAGVKNAEVAYANA 139

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +A L + +++L   + L++    S+  L   E     +   L       +     +    
Sbjct: 140 QASLETARRNLEATRLLYQAGGTSRQALWDAETAYANAQRALENARASLEAQREALRL-- 197

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                       ++  DL   +   +     L   +   E+  + +P AG ++   +   
Sbjct: 198 ---------RQAQLQEDLRAQEAALSQARLALAEAQANLEKTRVRAPFAGVVLSVSAN-P 247

Query: 309 SNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                   PL+ +   S     +   V   +I  V+ G    V            F+  +
Sbjct: 248 GAQVGPGTPLLTLGNLSAYALVLE--VDETEIAKVRVGQRVDVTLEGLPGET---FQGRV 302

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN-TTLA 423
           E I P    Q   +     ++V +++        +  LR G  A+     +   ++ 
Sbjct: 303 EAISP----QGQVVNNIPVFKVTVRL------PYDPRLRPGMSADGEIVVEEARSVL 349



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 68/203 (33%), Gaps = 13/203 (6%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               + + V+ SG++      +E++    GI+    VE G  +  G  L   +       
Sbjct: 39  ARGEVRVVVAGSGQLQP-WRTLEVRPEVQGILLSV-VEEGKAVKVGEVLAELDPDPFRRA 96

Query: 96  IDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC-- 149
            +  +  ++     +   ++     L  L       E A+ + +  L        +T   
Sbjct: 97  WESARADLQRAEASLANARAQGESSLASLQAGVKNAEVAYANAQASLETARRNLEATRLL 156

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +       +++ +        R++   R  LE +   LR   +  Q+DL       ++ 
Sbjct: 157 YQAGGTSRQALWDAETAYANAQRALENARASLEAQREALRLRQAQLQEDLR-----AQEA 211

Query: 210 AVSQNDLNQQERIVYKSTLELRE 232
           A+SQ  L   E         +R 
Sbjct: 212 ALSQARLALAEAQANLEKTRVRA 234


>gi|328468935|gb|EGF39895.1| multidrug resistance efflux pump [Vibrio parahaemolyticus 10329]
          Length = 337

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/374 (13%), Positives = 106/374 (28%), Gaps = 83/374 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  I     G + +  V++   + +GTPL   +D                      
Sbjct: 35  VHSDVTAISPEVGGQVSEIFVKDNQWVSKGTPLFVIDDE--------------------- 73

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                 DF+ NK                           ++    +     +L     + 
Sbjct: 74  ------DFIANK---------------------------EIARAALDVASSALTANQIKT 100

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
               +     +       A  +    +   +  L +K +VS+N    Q+    +++  L 
Sbjct: 101 DMQLMKIEQAKQGIRRASANAAHQAAEFKRLSRLVQKQSVSKNQFEAQKTRSIEASSNLE 160

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                     + ++ L  E     A   K                 + L +   + E+ T
Sbjct: 161 TAKLALAAEQKQLDTLMTEKLQLTAQRKK---------------AEANLRLAHISLERTT 205

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P  G +   Q      + Q    L+ +VP     +I A     Q+++V  G    V 
Sbjct: 206 VRAPFDGYVADRQV-QVGKFVQPGMGLIVMVP--DYVWIEANFKETQLENVLPGQEVKVV 262

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNI 403
              + +         +  I P    Q         T  + +V+    ++I      + + 
Sbjct: 263 LDMFPNR---PLHGRVSSITPATGAQFSLLPPQNATGNFVKVVQRVPVRIELEIPQELSQ 319

Query: 404 ELRNGFPAEVLFTA 417
            +  G  AEV    
Sbjct: 320 RVYPGLSAEVSIET 333


>gi|260591490|ref|ZP_05856948.1| secretion protein, HlyD family [Prevotella veroralis F0319]
 gi|260536521|gb|EEX19138.1| secretion protein, HlyD family [Prevotella veroralis F0319]
          Length = 338

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 106/284 (37%), Gaps = 18/284 (6%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + + L    +  ++ ++        +  + +      ++    +LDL+ + + +R  +++
Sbjct: 66  DARQLTLKREQLTSSNEQLAATHGQLAANKRQLAANQQATSSKQLDLKKQVAAIRQQIAN 125

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q++      L +  AV++  ++  +  +     +L     +  +    + E     N  
Sbjct: 126 QQRERQRFAELLQDGAVARKQVDDIDYQIQVLLKQLAATEEQISSQNTSLAEQ----NKG 181

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
               ++ I           A   ++   L+       + SPI GT++  +   +  Y   
Sbjct: 182 ITAQMEGIDAQQAGINAQQAGVRTQQAQLDDQIAHTFVRSPITGTVLE-KYVEAGEYVPV 240

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            +PL KI   +K  ++RA VT +Q++ VK G    V    Y   ++K +  ++  I    
Sbjct: 241 GKPLFKIA-DTKRMFLRAYVTSEQLKRVKIGQKVKVM-ADYGKGQKKTYNGVVTWISSRS 298

Query: 375 SQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                    ++ +    Y + ++ T+  +         G   EV
Sbjct: 299 EFTPKTIVTDDERADLVYAIKIQFTNDGYVKI------GMYGEV 336


>gi|209525218|ref|ZP_03273761.1| efflux transporter, RND family, MFP subunit [Arthrospira maxima
           CS-328]
 gi|209494403|gb|EDZ94715.1| efflux transporter, RND family, MFP subunit [Arthrospira maxima
           CS-328]
          Length = 500

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/386 (14%), Positives = 125/386 (32%), Gaps = 38/386 (9%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G IL       IKSP  G ++   V+ G ++ QG  L++  +     ++  K++ I+  
Sbjct: 65  EGGILELGGQRSIKSPEDGAVENILVQVGDRVTQGQQLMSLRNPNQQTILQKKQLDIQKQ 124

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              ++  +  +                 EEQL     +     ++ +   ++S      +
Sbjct: 125 EIIVERHRQEVTEA--------------EEQLAAAQRQLQIDQAQ-YQQELASKKAVKDL 169

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
            + R+ S          K       L++ ++ L   + L E+  V+Q ++ + E  V + 
Sbjct: 170 TIQRLESQVNRNR---QKVEEAEIELAAAEEKLASSRELLERGFVAQQEIERGEESVRQQ 226

Query: 227 TLELRENIHEQKNMLRHINELYDEANL-----------EFANYLKEISRDLEQNQRTFAD 275
           T  LR   H+    L  +     E              E    L++    L Q+      
Sbjct: 227 TTALRNAKHDLNTTLMELASAKAELITVSTTVNTSPVVESEIRLRQAKTTLRQSISELER 286

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +        +   I SPI G ++     +  +   +   L+ +   ++   +R +++
Sbjct: 287 LQIEYQEEALKLQNFVITSPINGVVLNINVKA-GDGLNRGHDLITLGDPNQE-IVRLQLS 344

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI-T 394
                 V++   A +             +  I ++D +      +   Q+       +  
Sbjct: 345 TLNAVQVRQNQLARI------TEIGPNPEVFIGRVDQVDLATRQSEGNQDSGSGQASVFA 398

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNT 420
            +        L  G P  V       
Sbjct: 399 TVKLDRPTGRLIPGSPVSVEIVLNQR 424


>gi|167589855|ref|ZP_02382243.1| secretion protein HlyD family protein [Burkholderia ubonensis Bu]
          Length = 336

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/372 (13%), Positives = 106/372 (28%), Gaps = 75/372 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NV  +    +G + +  V +  ++  G  L+          +D +    K  +   D
Sbjct: 34  VGGNVTVLAPKVNGFVDEILVTDNQRVKAGDVLVR---------LDARDYDAKLAQATAD 84

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E +                                               ++     + 
Sbjct: 85  VEGARA---------------------------------------------AVAELEAKQ 99

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +  Y        + S   A L+    D    + L + +AVS   + + +    K++  + 
Sbjct: 100 QLQYAVIGQQTAEKSASTAELTRASSDRVRYRELVKSDAVSNQIVERADADYSKASAAVD 159

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   +      ++   +     E  T
Sbjct: 160 RSDAALLAAKRQLDVL---------------GAQLADARARVNTALAAQRVAALNVEYTT 204

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +  N++      A    PL+ IVP S   +I A     Q++ ++ G    V 
Sbjct: 205 IRSPVDGYV-GNRTGRVGMLANVGVPLLTIVPASG-LWIDANFKEDQLKKMRPGDRVDVS 262

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRN 407
               +     + +++        S       T  + +++    +++   A       LR 
Sbjct: 263 LDASSLRVHGRVESLAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDAQPGLENVLRP 322

Query: 408 GFPAEVLFTAKN 419
           G  A V      
Sbjct: 323 GLSAVVTVHTAR 334


>gi|254228238|ref|ZP_04921667.1| Multidrug resistance efflux pump [Vibrio sp. Ex25]
 gi|151939311|gb|EDN58140.1| Multidrug resistance efflux pump [Vibrio sp. Ex25]
          Length = 346

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 53/374 (14%), Positives = 105/374 (28%), Gaps = 83/374 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  I     G + +  V++   + +GTPL   +D +                    
Sbjct: 44  VHSDVTAISPEVGGQVSEIFVKDNQWVREGTPLFVIDDEDFIAN---------------- 87

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                        ++   A +  + +L     K      K+          S   +    
Sbjct: 88  ------------QEIARAALDVAKSELTANQIKTDMQLMKIEQAKQGIRRASANAEHQAA 135

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
               L+R                          L +K +VS+N    Q+    +++  L 
Sbjct: 136 EFQRLSR--------------------------LVQKQSVSKNQFEAQKTRSIEASSNLE 169

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                     + ++ L  E     A   K                 + L +   + E+ T
Sbjct: 170 TAKLGLAAEQKQLDTLMTEKLQLTAQRKK---------------AEANLRLANISLERTT 214

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P  G +   Q      + Q    L+ +VP     +I A     Q+++V  G    V 
Sbjct: 215 VRAPFDGYVADRQV-QVGKFVQPGMGLIVMVP--DYVWIEANFKETQLENVVPGQEVEVV 271

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNI 403
              + +         +  I P    Q         T  + +V+    ++I      + + 
Sbjct: 272 LDMFPNH---PLHGRVSSITPATGAQFSLLPPQNATGNFVKVVQRVPVRIELEIPQELSQ 328

Query: 404 ELRNGFPAEVLFTA 417
            +  G  AEV    
Sbjct: 329 RVYPGLSAEVSIET 342


>gi|325474844|gb|EGC78030.1| bacteriocin ABC transporter [Treponema denticola F0402]
          Length = 379

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 102/280 (36%), Gaps = 23/280 (8%)

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                +++    + +E K     A + S +KDL M+     K A  + +     +   + 
Sbjct: 100 AQKERQNLEDLMIKIEQKIKDTEACIVSAEKDL-MLVPFERKIAYKRMENYFSVKTNLEK 158

Query: 227 TLELRENIHEQKNMLRH---INELYDEANLEFANYLKEISR-----------DLEQNQRT 272
            LEL   I E++  L      N+  +  NL      +++ +           + E  +  
Sbjct: 159 ALELNSRIFEEEKALPDFSLANQKIELLNLNVEKSKRDLEQYKNSFFHSLLSEKEALEFQ 218

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY-IR 331
             +  + L  +E++ +  T+ +PI+G +    S +  +     Q ++KIVP S     + 
Sbjct: 219 KENLSNSLFKMEESLKLFTVYAPISGEVQEISSLNCGDNVFSGQEILKIVPSSSENIRVV 278

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            ++   +   V++     ++FP +           +E I P +            Y V +
Sbjct: 279 LRLPSSKAGLVREDMKVRLKFPAFPHHEFGSLDGQVETILPDVFL----GAKSSEYAVFV 334

Query: 392 KITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIH 428
           K+      D       L+ G  AE     +  ++   I+ 
Sbjct: 335 KLDGNTLPDKKGVAHFLKVGLDAEASIITETGSILSFILK 374



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 88/238 (36%), Gaps = 10/238 (4%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           +  + L+         +  +  +  +    W IL   E  V +SG +   +NV  +KS  
Sbjct: 12  YTGEVLQEQKTGIFSSVISIICLLALCTTAWLILGKKEEVVRASGMVRPIENVSFVKSFT 71

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETT-------DLIDLKKVSIKNLRCHIDTEKSA 116
           +G I+     +G  + +G  LL  +D           DL+   +  IK+    I + +  
Sbjct: 72  AGKIQNIHFTSGQYVEKGAVLLNIDDTVAQKERQNLEDLMIKIEQKIKDTEACIVSAEKD 131

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI-- 174
           L  +  +  +  K  E+    +   L K     S++F    +    SL  +   + ++  
Sbjct: 132 LMLVPFERKIAYKRMENYF-SVKTNLEKALELNSRIFEEEKALPDFSLANQKIELLNLNV 190

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
             ++ DLE   +     L S ++ L   K     +     +  +   +    + E++E
Sbjct: 191 EKSKRDLEQYKNSFFHSLLSEKEALEFQKENLSNSLFKMEESLKLFTVYAPISGEVQE 248


>gi|299770093|ref|YP_003732119.1| multidrug resistance efflux pump [Acinetobacter sp. DR1]
 gi|298700181|gb|ADI90746.1| multidrug resistance efflux pump [Acinetobacter sp. DR1]
          Length = 353

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 93/299 (31%), Gaps = 29/299 (9%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +  F  + E L     + +       +  +S    +L ++    +S   +  + ++    
Sbjct: 75  DNQFVKKGETLAVLDHRDYQARYDQASSVVSLKEAALGVQQQNEKSAKSSITEAKSGVVA 134

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A L+  +KD    ++L +   +++ +    +     +  +L +           +  L
Sbjct: 135 AQADLTRLRKDFERYQDLLKDGVITRQNFEGIQSQYLTAQAQLSKAQAAVNAAEAQLGSL 194

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                               Q         + L + +       ++SP+ G I       
Sbjct: 195 K---------------ASRAQLLADIQSAHANLNLYQVDLASSKVVSPVDGKIGSLAI-Q 238

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             +       LM I+P +   Y++A     QI+ +  G    ++   Y  +        I
Sbjct: 239 KGSRVSPQTRLMAIIPENS-LYVQANFKETQIEKMHIGQKVELKLDAYPSLTY---SGKI 294

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE---LRNGF--PAEVLFTA 417
           E   P           +  T  + +V+ +I      D++     ++ G    A V    
Sbjct: 295 ESFSPASGATFSLMPPDNATGNFNKVVQRIPVRIAIDSSPHIDLIKPGMSVSATVDLRT 353



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/218 (10%), Positives = 66/218 (30%), Gaps = 8/218 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V  +    SG + +  + +   + +G  L   +  +     D     +      + 
Sbjct: 53  VQADVTWVMPKISGEVIELLINDNQFVKKGETLAVLDHRDYQARYDQASSVVSLKEAALG 112

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--------SKVFNYGISSVYRS 163
            ++       +     +    + +  L      +            ++    GI S Y +
Sbjct: 113 VQQQNEKSAKSSITEAKSGVVAAQADLTRLRKDFERYQDLLKDGVITRQNFEGIQSQYLT 172

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            + +L++ ++               RA L +  +      NL++ +  S   ++  +  +
Sbjct: 173 AQAQLSKAQAAVNAAEAQLGSLKASRAQLLADIQSAHANLNLYQVDLASSKVVSPVDGKI 232

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
               ++    +  Q  ++  I E        F     E
Sbjct: 233 GSLAIQKGSRVSPQTRLMAIIPENSLYVQANFKETQIE 270


>gi|298492697|ref|YP_003722874.1| DevB family ABC exporter membrane fusion protein ['Nostoc azollae'
           0708]
 gi|298234615|gb|ADI65751.1| ABC exporter membrane fusion protein, DevB family ['Nostoc azollae'
           0708]
          Length = 399

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/395 (12%), Positives = 127/395 (32%), Gaps = 67/395 (16%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPF---SGI-IKKFQVENGSQILQGTPLLTFED-IET 92
            PI  ++++ G +  E  ++ + +P     G+ + K  V  G +I QG  +   +     
Sbjct: 55  TPIATAIAALGRLEPEGGIIHLSAPNSQGGGVRVAKLLVNKGDKIRQGQVVAILDSYTPN 114

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +   K  ++  +  +   ++                                     
Sbjct: 115 IAALGKAKQQVEVAQASVKRVEAGAK---------------------------------- 140

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               I +   ++      +R     +   +   + L A  ++ + +    + L++  A+S
Sbjct: 141 -QGDIYAQKATIARLDAELRGETYAQ---KATIARLEAEFNNAEIEHQRYQKLYQHGAIS 196

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            +D + +         +L E        +  + +  +EA     + ++    D++  Q  
Sbjct: 197 ASDGDTKRLRRDTLQQQLNEAKASLNRTVETLQKQLNEAQARLNSIVEIRPTDIQAAQAD 256

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKL 327
                +     +   +  +I SPI G I+   ++         +      + ++   ++ 
Sbjct: 257 VNSAKASFKQAQAELDFSSIRSPIDGQILKINAW-------PGETIGNNGIAELG-RTQK 308

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD------NNL 381
            Y+ A+V    I+ V+ G +  +    +      K +  +  I   + +Q+         
Sbjct: 309 MYVVAEVYETDIKKVRLGQSVVITSDAF----TGKIQGTVTDIGLQVGKQNIFNNNPGAD 364

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              +   V ++I     +     L N    +VL  
Sbjct: 365 TDNKIINVKIRIDKSTDNQRVAALTN-LQVQVLIK 398


>gi|154252805|ref|YP_001413629.1| secretion protein HlyD family protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154156755|gb|ABS63972.1| secretion protein HlyD family protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 344

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/350 (14%), Positives = 106/350 (30%), Gaps = 28/350 (8%)

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G  L+             ++     LR  I +    +       DV +      
Sbjct: 11  GVSVTAG-LLIILSFGWLYAGRFEEETDNAYLRADITSIAPKVSGYVVGVDVADNETVEA 69

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            + L     K + T        ++S + SL                 E +    RA    
Sbjct: 70  GDILFRIDDKDYRTRLARAEADVASAHASLLNMEAERDLQESTIAQSEAQLDAARASQKF 129

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++    ++L   N VS+  L Q+E    ++   +       +   + +N L  +    
Sbjct: 130 FAREFERYRSLVRTNVVSRAQLEQREAASTQADAAVGAARAAVEVQRKKLNVLAAQREA- 188

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                          +   +   +   + +   +   + +P++G +V N+          
Sbjct: 189 --------------AEAALSQAEASRALAQIDLDNTIVKAPVSG-VVGNRQVRVGRLVTA 233

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
             PL+ +VP   +  + A     Q++HV+ G    V    Y      + + +++ + P  
Sbjct: 234 GMPLLDLVPIPHIWVV-ANFKESQLEHVRVGQPVRVTVDAYPHA---EVRGVVDSLSPGS 289

Query: 375 SQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTA 417
                    +  T  +  V+ ++     L      + L  G  A V    
Sbjct: 290 GAAFSLIPPDSATGNFVRVVQRVPVNIRLTSVVPQLRLVPGLSARVTIDT 339



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 48/155 (30%), Gaps = 2/155 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V +   +  G  L   +D +    +   +  + +    +   ++  D   + 
Sbjct: 53  SGYVVGVDVADNETVEAGDILFRIDDKDYRTRLARAEADVASAHASLLNMEAERDLQEST 112

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDL 181
               E   ++       F  ++    S V       + + +          ++   R  +
Sbjct: 113 IAQSEAQLDAARASQKFFAREFERYRSLVRTNVVSRAQLEQREAASTQADAAVGAARAAV 172

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           E +   L  L +  +     +       A++Q DL
Sbjct: 173 EVQRKKLNVLAAQREAAEAALSQAEASRALAQIDL 207


>gi|61227654|sp|P0A3G5|LCND_LACLA RecName: Full=Lactococcin A secretion protein lcnD
 gi|61227655|sp|P0A3G6|LCND_LACLC RecName: Full=Lactococcin A secretion protein lcnD
 gi|149420|gb|AAA92855.1| export/processing protein [Lactococcus lactis]
          Length = 474

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 70/445 (15%), Positives = 157/445 (35%), Gaps = 50/445 (11%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           +G + ++     E++V S+G I     V +I+S  +  I +  ++ G  + + + LL + 
Sbjct: 33  VGGVIFTFFAHKELTVISTGSIEPTKIVAKIQSTNANPIIENNLKEGEAVKENSLLLKYN 92

Query: 89  DIETTDLIDL---KKVSIKNLRCHIDTEKSAL-----DFLNNKYDVLEKAFESREEQLLD 140
                  +     +K    + +  +D  + +L     +F        EK+FE+ E Q+  
Sbjct: 93  GTPEQTQLSELLTQKKQALDKKVQLDLLQRSLTNEKNEFPTADSFGYEKSFENYEAQVKS 152

Query: 141 FLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLDLEN--------------- 183
                  +   V +   S  S  ++++ ++  ++    N  ++EN               
Sbjct: 153 LEATIQKSNQAVEDQNKSTESQKQAIQNQVATLQQAIQNYSEIENAVSSGGGVSQDNPYL 212

Query: 184 -KSSLLRALLSSHQKDLTMMKN---LFEKNAVSQNDLNQQE--RIVYKSTLELRENIHEQ 237
            + +  +A  ++ + DL   KN     ++ A SQ +  + +    +  S   L+  I   
Sbjct: 213 SQYNSYQAQQATLEADLKNQKNPDETAKQAAKSQEESLKSQFLSGLASSKDSLKSQIQSF 272

Query: 238 KNMLRHI-------NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                 +       N    +     +  L   ++++     T  D  +K+++ ++  +  
Sbjct: 273 NVQESSLTGSNAYDNSQSSQILTLKSQALSASNKEMTDLNSTLTDLETKISLQKQDDQYS 332

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYT 347
            + +  AG +                P+ +I P         + + +   QI  +K G  
Sbjct: 333 QVFAEQAGVLHVLPDILGMKKIPIGTPIAEIYPLLKSETQVNLTSYIPSTQISGMKVGQK 392

Query: 348 ATVRFPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
             VRF    ++ + +    II +ID          +    Y+V    T  A    N  +R
Sbjct: 393 --VRFTVQQNLPQPEILTGIINQIDS----APTAFKEGNAYKVSATTTINAKDLPN--IR 444

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPIT 431
            G   + +      T     +  I 
Sbjct: 445 YGLQGKTVTIIGKKTYFNYFLDKIM 469


>gi|153954835|ref|YP_001395600.1| hypothetical protein CKL_2217 [Clostridium kluyveri DSM 555]
 gi|219855294|ref|YP_002472416.1| hypothetical protein CKR_1951 [Clostridium kluyveri NBRC 12016]
 gi|146347693|gb|EDK34229.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219569018|dbj|BAH07002.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 348

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/405 (13%), Positives = 125/405 (30%), Gaps = 81/405 (20%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE----IKSPFSGIIKKFQVENGS 76
            ++ I    G    + L   +++  S+  ++ + N+      I S  +G I   + + G 
Sbjct: 11  LVIIISFFTGCGNIAALTGDDLTQKSNSNLIVQGNIETKEVNINSKVAGKITAIKADEGD 70

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G  L+T ++            S+         E                  E+   
Sbjct: 71  SVKSGQVLITIDN-----------SSLVAKEAQSQAE-----------------IEAATG 102

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q+        +  +K+      +    +                     +  ++     +
Sbjct: 103 QMKAAQAAKEAAQAKLSQAQNGARPDEI---------------------ASAKSQYDLAK 141

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLEF 255
                +  LF++   ++ +L++ E  +  +  +        +   +  +     +A+   
Sbjct: 142 ATYDRINTLFQQGYTTKENLDKAETSMNVAENQYNIVKDGARTEDIAALQAQVSQADATI 201

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             Y       ++Q Q   ++  S +T         TI +P  G I               
Sbjct: 202 QAYQ----AQIKQAQGGKSEVQSYIT-------DTTITAPADGIINQRNV-EVGELVSTG 249

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PI 373
            PL+ I   +   +I   V    +  VK   T +V+   Y   +   FK  + +I+  P 
Sbjct: 250 MPLLVITNTTTP-WIECNVKETDLSKVKLNQTVSVKLSSYPKQK---FKGKVVRINEKPD 305

Query: 374 ISQQDNNLQTQEY----YEVILKITDLAFSDNNIELRNGFPAEVL 414
            + +       ++    Y V +++T +     N  L  G  A V 
Sbjct: 306 FAVKRATNDNGDFDVLSYGVKVELTSV-----NKTLYQGMTAFVD 345


>gi|168492691|ref|ZP_02716834.1| BlpC ABC transporter [Streptococcus pneumoniae CDC3059-06]
 gi|221231364|ref|YP_002510516.1| ABC transporter [Streptococcus pneumoniae ATCC 700669]
 gi|225854079|ref|YP_002735591.1| BlpC ABC transporter [Streptococcus pneumoniae JJA]
 gi|183577067|gb|EDT97595.1| BlpC ABC transporter [Streptococcus pneumoniae CDC3059-06]
 gi|220673824|emb|CAR68326.1| ABC transporter BlpB [Streptococcus pneumoniae ATCC 700669]
 gi|225722935|gb|ACO18788.1| BlpC ABC transporter [Streptococcus pneumoniae JJA]
          Length = 453

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 65/440 (14%), Positives = 146/440 (33%), Gaps = 32/440 (7%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGII 67
            +R H  +   +  LS++    LI  S++   EI+V+S GEI     +  I+S   + I+
Sbjct: 13  QRRYHNYATVFIIPLSLLFTFILIF-SLVATKEITVTSQGEIAPTSVIASIQSTSDNPIL 71

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V N   + +G  L+ + +             ++ L    +        L    D+ 
Sbjct: 72  ANHLVAN-QVVEKGDLLIKYSETMEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLF 130

Query: 128 EKAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
               E          +++   ++      +T         +S   +++ ++T+++     
Sbjct: 131 SGEDEFGYHNTFMNFTKQSHDIELGITKTNTEVSNQANLSNSSSSAIEQEITKVQQQIGE 190

Query: 178 RLDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTL 228
             +L +     RA L +     +++ + L      +Q        + +NQ    +  S  
Sbjct: 191 YQELRDAIINNRARLPTGNPHQSILNRYLVASQGQTQGTAEEPFLSQINQSIAGLESSIA 250

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E
Sbjct: 251 SLKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLE 310

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKG 345
             T+ SP  G +  N  F   N       + +I P    ++   I   V+   +  + KG
Sbjct: 311 NNTLTSPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKG 370

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            T  ++     +         ++ ID   ++ +     +      L   D         +
Sbjct: 371 QTVRLKLEKIGNHGT-TIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------I 423

Query: 406 RNGFPAEVLFTAKNTTLAQE 425
           + G    V       T    
Sbjct: 424 QYGLQGRVTSVTTKKTYFDY 443


>gi|326798314|ref|YP_004316133.1| secretion protein HlyD [Sphingobacterium sp. 21]
 gi|326549078|gb|ADZ77463.1| secretion protein HlyD family protein [Sphingobacterium sp. 21]
          Length = 348

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 62/409 (15%), Positives = 127/409 (31%), Gaps = 94/409 (22%)

Query: 22  LLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
              I+  I ++ W  +        E +  +      +  +  I +   G I K   ++  
Sbjct: 16  WFGIVLFIAIVIWGAIYFFKGYRYEQTNDAQ----VDAYLSPINAKVGGYISKIYYKDNQ 71

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           Q+ +G  L+  E       +D   +        + +  + L  L    +           
Sbjct: 72  QVQKGDTLVVIE-------LDEYGLKRDAALAELMSSHAKLPILTANEE----------- 113

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                                           T+++SI + R  L    +  +A L+  Q
Sbjct: 114 --------------------------------TQIKSIEVIRAQL----AGAKARLNQQQ 137

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++    KNL    + +Q   +     +  +  + ++     +     +++L   A  +  
Sbjct: 138 REFDRYKNLLADESTTQQKFDNVSASLAITQADYKQTKASLQVAESKLDDLG--AQRKAI 195

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
               +I   L + Q             E       I +P  G I   ++       Q  Q
Sbjct: 196 EAEIKIKEALLERQ-------------ELDIRYTVITAPFDGQI-GKKTIQEGQLIQPGQ 241

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  +V  ++  ++ A     Q+   K G T TV    + + +   F  +IE + P    
Sbjct: 242 TLAFLVNSAEEKWVIANFKETQVGSFKVGQTVTVEVDAFPNDK---FSGLIESLSPTTGS 298

Query: 377 Q----DNNLQTQEYYE------VILKITDLAFSDNNIELRNGFPAEVLF 415
           +      +  T  + +      V +K+TD A      +L  G  A V  
Sbjct: 299 RYSLLPPDNATGNFVKIIQRIPVRIKLTDTAEKLA--KLSAGMNANVYV 345


>gi|85375830|ref|YP_459892.1| hlyD family multidrug secretion protein [Erythrobacter litoralis
           HTCC2594]
 gi|84788913|gb|ABC65095.1| putative hlyD family multidrug secretion protein [Erythrobacter
           litoralis HTCC2594]
          Length = 382

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 85/301 (28%), Gaps = 28/301 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E    +  + L+    + +   +      I++          + +           + 
Sbjct: 87  VTENQTVASGDALVQLDVRDYRAQTNQVEAQIAASLAGADTVRAQQQEQDAAIAQARAQL 146

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +          + +   + L    A  +  L+Q E    ++  ++           R   
Sbjct: 147 AAASTQAGLAAEQVVRYRPLAASGAEPRERLDQLEAQASEAQAQVAAARAVLTAAQRR-- 204

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                           +S  ++Q         ++L          T+ + I+G +     
Sbjct: 205 -------------QNTLSEQIDQANSQANAARAQLEAARLNLSSTTLQASISGRVGDLTV 251

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                + Q  Q LM +VP     Y+ A     Q+  V+ G   T+      D+   +   
Sbjct: 252 R-PGQFVQPGQRLMSLVPTD-RLYVTANFKETQLGLVRPGQPVTLEIDALPDL---ELLG 306

Query: 366 IIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +E I P        +  Q      T+    V ++I+  A  +    L  G         
Sbjct: 307 RVESIAPGTGAEFSILPPQNATGNFTKIVQRVPVRISIQASPEILRLLVPGMSVVASVDT 366

Query: 418 K 418
           +
Sbjct: 367 R 367



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 24/249 (9%), Positives = 66/249 (26%), Gaps = 7/249 (2%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           + V I    +G +++  V     +  G  L+  +  +     +  +  I       DT +
Sbjct: 70  DSVIISPKIAGYVERVLVTENQTVASGDALVQLDVRDYRAQTNQVEAQIAASLAGADTVR 129

Query: 115 SALDFLNNKYDVLEKAFESREEQL-----LDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +     +           +   Q           +  +         +  +         
Sbjct: 130 AQQQEQDAAIAQARAQLAAASTQAGLAAEQVVRYRPLAASGAEPRERLDQLEAQASEAQA 189

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++ +        + + + L   +          +   E   ++ +     +  +     +
Sbjct: 190 QVAAARAVLTAAQRRQNTLSEQIDQANSQANAARAQLEAARLNLSS-TTLQASISGRVGD 248

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L     +     + +  L     L      KE    L +  +    E+  L  LE    +
Sbjct: 249 LTVRPGQFVQPGQRLMSLVPTDRLYVTANFKETQLGLVRPGQPVTLEIDALPDLE-LLGR 307

Query: 290 KTILSPIAG 298
              ++P  G
Sbjct: 308 VESIAPGTG 316


>gi|168488218|ref|ZP_02712417.1| BlpC ABC transporter [Streptococcus pneumoniae SP195]
 gi|237650743|ref|ZP_04524995.1| BlpC ABC transporter [Streptococcus pneumoniae CCRI 1974]
 gi|237822331|ref|ZP_04598176.1| BlpC ABC transporter [Streptococcus pneumoniae CCRI 1974M2]
 gi|183573052|gb|EDT93580.1| BlpC ABC transporter [Streptococcus pneumoniae SP195]
 gi|332074342|gb|EGI84818.1| bacteriocin secretion accessory family protein [Streptococcus
           pneumoniae GA17570]
          Length = 453

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 63/439 (14%), Positives = 145/439 (33%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEIAPTSVISSIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +             ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE--------SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNR 178
              E        +  +Q  D       T ++V N     +S   +++ ++T+++      
Sbjct: 132 GEDEFGYHNTFMNFTKQSHDIELGITKTNTEVSNQANLANSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALL-SSHQKDLTMMKNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +S+     + + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIINNRARLPTSNPHQSILNRYLVASQGQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P  G +  N  F   N       + ++ P    ++   I   V    +  + KG 
Sbjct: 312 NTLTAPSKGIVHLNSEFEGENRIPTGTEIAQVFPIITDTREVLITYYVASDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGN-HGITIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|50084134|ref|YP_045644.1| multidrug resistance secretion protein [Acinetobacter sp. ADP1]
 gi|49530110|emb|CAG67822.1| multidrug resistance secretion protein [Acinetobacter sp. ADP1]
          Length = 378

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 53/406 (13%), Positives = 122/406 (30%), Gaps = 61/406 (15%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           K +++ +++ +I  I ++I         S+          +I S  +G + + +V +  Q
Sbjct: 23  KLLSIFALVIVIVAILYAIWFFFFNHTVSTDNAYVGAETAQITSMVTGQVAEIRVHDTQQ 82

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +                                             R+ Q
Sbjct: 83  VHKGDILAQVD--------------------------------------------PRDAQ 98

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +     +     ++       +  +SL  ++             + +    +A  ++  +
Sbjct: 99  IALSQAQAMLAKAQRQYRQTEANSKSLNSQVF---VSDDGIASAQAQVGKAQADYNNAIE 155

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +L   + L +  A+S+ +L+  +     +   L       K  +         A    A 
Sbjct: 156 ELKRRQTLEQSGAISKEELSTAQTAAQTAKAALDV----AKAAVSQAQSSRKAAQSNLAA 211

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
               I    E +        + +   +   E+  I SP+ G I   ++            
Sbjct: 212 NQALIQGASENSAPDVLSAEANVQQAQLDLERTVIRSPVDGVITG-RNIQVGQRVAPGSV 270

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD-----IREKKFKAIIEKIDP 372
           LMKIVP     Y+ A     Q+  V+ G  AT+    Y        +   F         
Sbjct: 271 LMKIVPL-SALYVDANFKESQLSKVRVGQAATLTSDLYGSDVEYHGKVIGFSGGTGSAFA 329

Query: 373 IISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +I  Q+      +  +   V + +     +++ + +     A +  
Sbjct: 330 LIPAQNATGNWIKVVQRLPVRIALDPKELAEHPLRVGLSMDASIDL 375


>gi|300716363|ref|YP_003741166.1| toxin secretion, membrane fusion protein [Erwinia billingiae Eb661]
 gi|299062199|emb|CAX59315.1| putative toxin secretion, membrane fusion protein [Erwinia
           billingiae Eb661]
          Length = 410

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/391 (12%), Positives = 123/391 (31%), Gaps = 71/391 (18%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V  G  +  G  + +                       +          N   
Sbjct: 63  GNVSAIYVNEGDSVNPGDAIFS-----------------------VALLWQNTKDHNGVG 99

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++ E+  +   E L++F  +              +  + L  K      +  +    EN 
Sbjct: 100 NMAEETTKRLNETLVEFETER--------ENQSENDDQLLIQKERYFNELTQSISIAENA 151

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                     +   L  +  L++ NA+++ ++    +++ ++ L ++++  E+  +L   
Sbjct: 152 IKNYHDKKRLYATQLRDLTRLYKDNAITKTEVENTRQLIIENELGVKKSEVEKSGLL--- 208

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +   E  + +A   +E  +      R   +  S+L  + + R++  + SPI G +    
Sbjct: 209 -QTKIEKEIHYARLEQESLQRKNDISRKIREIGSELNNI-RMRQEYIVTSPIKGIVHDMG 266

Query: 305 SFS---------SSNYA----QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
                       + +        ++P++ +           +++ KQI  +  G    VR
Sbjct: 267 ILKGDFIDGRALTPSVILKENSAAEPVVVL-----------QLSSKQIGLISPGEKVFVR 315

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN---- 407
              +         A +  I    ++   + + + ++ V L I     +++          
Sbjct: 316 VDTFPYESYGVLAAKVINISTTPTRVSVDDK-ESWFRVKLNI----LANDKHNKIPMEFL 370

Query: 408 --GFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
             G            TL + +  P+     +
Sbjct: 371 ADGMTVSASLRQPKQTLIEWLFLPVKQALKR 401


>gi|239502540|ref|ZP_04661850.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB900]
 gi|260554964|ref|ZP_05827185.1| RND family drug transporter [Acinetobacter baumannii ATCC 19606]
 gi|260411506|gb|EEX04803.1| RND family drug transporter [Acinetobacter baumannii ATCC 19606]
          Length = 353

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 94/299 (31%), Gaps = 29/299 (9%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +  F  + E L     + +          +S    +L ++    +S   + ++  +    
Sbjct: 75  DNQFVKKGETLAVLDHRDYQARYDQARSVVSLKEAALGVQQQNEKSAKSSIIEANSGVVA 134

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A L+  +K+    ++L +   +++ +    +     +  +L +           +  L
Sbjct: 135 AQADLARLKKEFERYQDLLKDGVITRQNFEGIQSQYLTAQAQLSKAQAAVNAAEAQLGSL 194

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                               Q         + L + +       ++SP++G I       
Sbjct: 195 Q---------------ASRAQLLADIQSANANLNLYQVDLASSKVVSPVSGKIGSLAI-Q 238

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             +       LM I+P +   Y++A     QI+ +  G    ++   Y  +    F   I
Sbjct: 239 KGSRVSPQTRLMAIIPENS-LYVQANFKETQIEKMHIGQKVKLKLDAYPSLN---FTGKI 294

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE---LRNGF--PAEVLFTA 417
           E   P           +  T  + +V+ +I      D++     ++ G    A V    
Sbjct: 295 ESFSPASGATFSLMPPDNATGNFNKVVQRIPVRIAIDSSPHIDLIKPGMSVSATVDLRT 353



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/218 (10%), Positives = 66/218 (30%), Gaps = 8/218 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V  +    SG + +  + +   + +G  L   +  +     D  +  +      + 
Sbjct: 53  VQADVTWVMPKISGEVMELLINDNQFVKKGETLAVLDHRDYQARYDQARSVVSLKEAALG 112

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--------SKVFNYGISSVYRS 163
            ++       +          + +  L     ++            ++    GI S Y +
Sbjct: 113 VQQQNEKSAKSSIIEANSGVVAAQADLARLKKEFERYQDLLKDGVITRQNFEGIQSQYLT 172

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            + +L++ ++               RA L +  +      NL++ +  S   ++     +
Sbjct: 173 AQAQLSKAQAAVNAAEAQLGSLQASRAQLLADIQSANANLNLYQVDLASSKVVSPVSGKI 232

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
               ++    +  Q  ++  I E        F     E
Sbjct: 233 GSLAIQKGSRVSPQTRLMAIIPENSLYVQANFKETQIE 270


>gi|166365509|ref|YP_001657782.1| efflux transporter MFP subunit [Microcystis aeruginosa NIES-843]
 gi|166087882|dbj|BAG02590.1| efflux transporter MFP subunit [Microcystis aeruginosa NIES-843]
          Length = 508

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/330 (14%), Positives = 113/330 (34%), Gaps = 51/330 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G + +  V  G  + QGTPL   +D +            +     +   ++        
Sbjct: 104 GGTMTQLLVTEGQWVNQGTPLARLDDRQLIAQTQDLLAQKQQALAQLKEMEAG------- 156

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                    SR E +           +++    +     ++     R++           
Sbjct: 157 ---------SRAETIAAAQANLAQEKAQLQEMEVGPRTETIAAAQARLK----------- 196

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-------QERIVYKSTLELRENIHE 236
               L+A L+  +      +NL+ + A+S    ++       Q+  V ++  +L E +  
Sbjct: 197 ---TLQAQLALARSKRERRQNLYTQGAISLEQFDEVVTDMDSQQARVNEAQSQLDELLAG 253

Query: 237 QK-NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM-SKLTILEKTREQKTILS 294
            +  +L        +A  +    L    R++ + Q+    ++ S+L  +E   E+  + +
Sbjct: 254 TRPEILTQQQARVKQAQSQLDELLAGTRREVIEAQKAAIKQLDSRLASIELDLEKTVLKA 313

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKKGYTATVRF 352
           P +G I   +        Q  Q ++++V       ++A   V       +K G + T++ 
Sbjct: 314 PFSGKIQK-RYLDQGTAVQAGQGVVRLVQLDG---VKAHIGVPTSLTSEIKIGQSQTLKI 369

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  +K + A ++ I P +      + 
Sbjct: 370 D------QKSYSATVKAILPELDAASRTVT 393


>gi|300772275|ref|ZP_07082145.1| HlyD-family transporter [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760578|gb|EFK57404.1| HlyD-family transporter [Sphingobacterium spiritivorum ATCC 33861]
          Length = 435

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/430 (12%), Positives = 143/430 (33%), Gaps = 32/430 (7%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +    P  L R   L I+GII    + + ++     ++S   I +++   +I+     
Sbjct: 19  QEVLETPPNWLIRWGSLVILGIILLFFSLACIIKYPEFITSPIIISSQNPPEKIEIRIDS 78

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I+K   ++   + +G  L+  E       I   K  + ++     +          +  
Sbjct: 79  RIEKLIAKDQQTVKKGDLLMVLESSADDKDIHQLKGILDSISTKHLSRFPLHLVSGFRLG 138

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            +++ + +  + L +          ++    +             +        +L+ + 
Sbjct: 139 EVQEDYNAFAKALEE----------EILFNSLQPYAAEEITAAKGITDYKERIANLKQQH 188

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            L  +     +K+    ++L  +  +S  +L  ++  +    LE ++N    +  +  + 
Sbjct: 189 ILESSKYQLTEKNYKRSESLHREGVISALELENEKLKL----LEAQKNFKNTEIAIAQLE 244

Query: 246 ELYDEAN-LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           E       L+    +  +      +  +          L +      + + I GT+ Y Q
Sbjct: 245 ETILNFRKLKSGADVNIVKEKTSYSSASVLLLEKLKKSLRQWERNYLVYASIDGTLSYLQ 304

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                 + +    L+ ++P+++   I +  +  +    +K      ++  +Y        
Sbjct: 305 FLGEKQFVKAGTTLLSVLPNNRQITIGQMHIGAQNQGKIKTDQKVLIKLDNYKYQEYGIV 364

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL-----RNGFPAEVLFTAK 418
           K  I+ I  +  +          Y V + + +   +  +  L      +G         +
Sbjct: 365 KGKIKSIAMVQDKDSK-------YYVEVSLPEGLQTSYHKTLAFDKELSG---TADIVTE 414

Query: 419 NTTLAQEIIH 428
             TLA+ I+ 
Sbjct: 415 ELTLAERILS 424


>gi|292571839|gb|ADE29754.1| Multidrug resistance protein A [Rickettsia prowazekii Rp22]
          Length = 355

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 58/421 (13%), Positives = 131/421 (31%), Gaps = 90/421 (21%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           K  H + +K + ++ +I           W+     + +         + ++  I +  SG
Sbjct: 16  KYKHYSFIKHVIIIVLIIFTYFGYRIYVWANTQSTDNAYI-------DADISNISAEVSG 68

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++ K  V N +++ +G  +   +D              ++ +  +               
Sbjct: 69  VLTKLFVTNNTRVNKGELIGEIDD--------------RDYKARLAA------------- 101

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                                       +  I +  +++++   ++    +    +  K 
Sbjct: 102 ---------------------------LDAAIQACIKNIEIIEQKISIGKMRLEQVAEKL 134

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            L +        D T ++ L     VS   L+  +    K   E ++           ++
Sbjct: 135 KLTKISFDIISIDFTRVQALSNAKFVSSKTLDDSKNEYQKVKTEYKQ---------AQLD 185

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               + NL+     K         Q    +      I  ++ +   I++ + G I  N +
Sbjct: 186 LDISKHNLQLLELEK------SAAQEKLKELTENKKITLRSLQNTKIIAMVPG-IFSNSN 238

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +  NY    + L  IV      YI+A     QI++ K G    + F  +     K    
Sbjct: 239 LAVGNYIVMGKALFSIV-QDNTMYIKANFKETQIKNFKSGMKVKIVFDAFP---TKVIYG 294

Query: 366 IIEKIDPIISQQ----DNNLQTQEYYEVILKITD-LAFSDNNIELRNGFPAEVLFTAKNT 420
            I  I P    +      +  T  + +++ +++  + F   N  L  G  A V      +
Sbjct: 295 KIRNIAPATGAKFSLIPPDNATGNFTKIVQRVSVLIDFVSPNANLVPGMSARVSIRTDQS 354

Query: 421 T 421
           T
Sbjct: 355 T 355


>gi|17232465|ref|NP_489013.1| hypothetical protein alr4973 [Nostoc sp. PCC 7120]
 gi|17134111|dbj|BAB76672.1| alr4973 [Nostoc sp. PCC 7120]
          Length = 399

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 115/340 (33%), Gaps = 47/340 (13%)

Query: 42  ISVSSSGEILNEDNVVEI---KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            ++++ G I  +  VV++   ++  S  I +  V+ G +I +G  +   ++ +T      
Sbjct: 60  KAITALGRIEPQGEVVQVSVSQTAGSNRIAELLVKQGDRINKGQIIAILDNRDTR----- 114

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                                          A    ++Q+     +     +      I+
Sbjct: 115 -----------------------------LAALNRAKQQVAVAQSQLAQVKAGAKQGEIA 145

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +   ++      +R     R+        L A + + Q +    ++L    AVS +  + 
Sbjct: 146 AQQATIAELAAELRQEVAARV---ATVRRLEAEVRNAQIEYQRYQSLQADGAVSVSIRDS 202

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           ++  +  +   LRE +  +      + E   +A        +    D++  Q       +
Sbjct: 203 KKLTLETAEESLREALANRSQTSETLQERLRQAKATLNQIAEVRPTDVQAAQAEVESAKA 262

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            +   +       + SP AG I   +  +        + +++I   +   Y+ A+V    
Sbjct: 263 AVQEAQANLNLTYVKSPKAGQI--LKIHTLVGEVVSDKGIVEIG-QTNQMYVVAEVYEVD 319

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           I  VK G  ATV           +    +E I  +I+++D
Sbjct: 320 INRVKIGQRATVT----QLNLPGELTGTVEDIGLLIAKKD 355


>gi|218676612|ref|YP_002395431.1| Multidrug resistance protein A [Vibrio splendidus LGP32]
 gi|218324880|emb|CAV26639.1| Multidrug resistance protein A [Vibrio splendidus LGP32]
          Length = 354

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 92/286 (32%), Gaps = 28/286 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    + + +     N  +S V   +K  + +           E++    +A      +
Sbjct: 85  LVQIDDRDYQSALAQANAHLSVVQSDVKNLVAQQTLQRSKINQAESRVDSAQAEYERAIQ 144

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +   ++L ++N  SQ++++        +  +L E                        +
Sbjct: 145 QVVRSRSLLKRNYASQDEVDSMAAQQKVTQADLEEAKANLVAT---------------ND 189

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L  I+ ++EQ   +  +  ++    +   +   + +P  G I   +S       Q   P
Sbjct: 190 QLTVIASEIEQANASVTEAQAQRDQAQLNLDYTKVYAPADGVI-GKRSVREGLLIQAGAP 248

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           LM +VP +   +I A     Q+  + KG +  V    +     +  + +++   P     
Sbjct: 249 LMSLVP-NNQVWIEANFKETQLSGIHKGQSVEVELDAFP---GQPLEGVVDSFSPATGAK 304

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                 +      T+    V +KI      +    L  G       
Sbjct: 305 FALLPPENATGNFTKIVQRVPVKIIIPDQQELKGRLLPGLSVVATI 350


>gi|262279133|ref|ZP_06056918.1| HlyD family secretion family protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259484|gb|EEY78217.1| HlyD family secretion family protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 353

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 93/299 (31%), Gaps = 29/299 (9%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +  F  + E L     + +       +  +S    +L ++    +S   +  +  +    
Sbjct: 75  DNQFVKKGETLAVLDHRDYQARYDQASSVVSLKEAALGVQQQNEKSAKSSITEANSGVVA 134

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A LS  +KD    ++L +   +++ +    +     +  +L +           +  L
Sbjct: 135 AQADLSRLRKDFERYQDLLKDGVITRQNFEGVQSQYLTAQAQLSKAQAAVNAAEAQLGSL 194

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                               Q         + L + +       ++SP+AG I       
Sbjct: 195 ---------------QASRAQLLADIQSANANLNLYQIDLASSKVVSPVAGKIGSLAI-Q 238

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             +       LM I+P +   Y++A     QI+ +  G    ++   Y  +        I
Sbjct: 239 KGSRVSPQTRLMAIIPENS-LYVQANFKETQIEKMHIGQKVKLKLDAYPSLTY---SGTI 294

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE---LRNGF--PAEVLFTA 417
           E   P           +  T  + +V+ +I      D++     ++ G    A V    
Sbjct: 295 ESFSPASGATFSLMPPDNATGNFNKVVQRIPVRIAIDSSPHIDLIKPGMSVSATVDLRT 353


>gi|332854419|ref|ZP_08435351.1| efflux pump membrane protein [Acinetobacter baumannii 6013150]
 gi|332868474|ref|ZP_08438186.1| efflux pump membrane protein [Acinetobacter baumannii 6013113]
 gi|88758840|emb|CAJ77848.1| RND family drug transporter [Acinetobacter baumannii AYE]
 gi|332727995|gb|EGJ59387.1| efflux pump membrane protein [Acinetobacter baumannii 6013150]
 gi|332733361|gb|EGJ64548.1| efflux pump membrane protein [Acinetobacter baumannii 6013113]
          Length = 355

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 94/299 (31%), Gaps = 29/299 (9%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +  F  + E L     + +          +S    +L ++    +S   + ++  +    
Sbjct: 77  DNQFVKKGETLAVLDHRDYQARYDQARSVVSLKEAALGVQQQNEKSARSSIIEANSGVVA 136

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A L+  +K+    ++L +   +++ +    +     +  +L +           +  L
Sbjct: 137 AQADLARLKKEFERYQDLLKDGVITRQNFEGIQSQYLTAQAQLSKAQAAVNAAEAQLGSL 196

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                               Q         + L + +       ++SP++G I       
Sbjct: 197 Q---------------ASRAQLLADIQSANANLNLYQVDLASSKVVSPVSGKIGSLAI-Q 240

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             +       LM I+P +   Y++A     QI+ +  G    ++   Y  +    F   I
Sbjct: 241 KGSRVSPQTRLMAIIPENS-LYVQANFKETQIEKMHIGQKVKLKLDAYPSLN---FTGKI 296

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE---LRNGF--PAEVLFTA 417
           E   P           +  T  + +V+ +I      D++     ++ G    A V    
Sbjct: 297 ESFSPASGATFSLMPPDNATGNFNKVVQRIPVRIAIDSSPHIDLIKPGMSVSATVDLRT 355



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/218 (10%), Positives = 66/218 (30%), Gaps = 8/218 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V  +    SG + +  + +   + +G  L   +  +     D  +  +      + 
Sbjct: 55  VQADVTWVMPKISGEVMELLINDNQFVKKGETLAVLDHRDYQARYDQARSVVSLKEAALG 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--------SKVFNYGISSVYRS 163
            ++       +          + +  L     ++            ++    GI S Y +
Sbjct: 115 VQQQNEKSARSSIIEANSGVVAAQADLARLKKEFERYQDLLKDGVITRQNFEGIQSQYLT 174

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            + +L++ ++               RA L +  +      NL++ +  S   ++     +
Sbjct: 175 AQAQLSKAQAAVNAAEAQLGSLQASRAQLLADIQSANANLNLYQVDLASSKVVSPVSGKI 234

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
               ++    +  Q  ++  I E        F     E
Sbjct: 235 GSLAIQKGSRVSPQTRLMAIIPENSLYVQANFKETQIE 272


>gi|260550376|ref|ZP_05824587.1| multidrug resistance efflux pump [Acinetobacter sp. RUH2624]
 gi|260406482|gb|EEW99963.1| multidrug resistance efflux pump [Acinetobacter sp. RUH2624]
          Length = 353

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 98/310 (31%), Gaps = 34/310 (10%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           ++ L N   V++K          D+  +Y    S V     S    +L ++    +S   
Sbjct: 69  MELLINDNQVVKKGETLAVLDHRDYQARYDQARSVV-----SLKEAALGVQQQNEKSAKS 123

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           +  +  +     +A LS  +K+    ++L +   +++ +    +     +  +L +    
Sbjct: 124 SITEANSGVVAAQADLSRLKKEFERYQDLLKDGVITRQNFEGIQSQYLTAQAQLSKAQAA 183

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                  +  L                    Q         + L + +       ++SP+
Sbjct: 184 VNAAEAQLGSLQ---------------ASRAQLLADIQSANANLNLYQVDLASSKVISPV 228

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G I         +       LM I+P +   Y++A     QI+ +  G    ++   Y 
Sbjct: 229 SGKIGSLAI-QKGSRVSPQTRLMAIIPENS-LYVQANFKETQIEKMHIGQKVKLKLDAYP 286

Query: 357 DIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE---LRNGF 409
            +        IE   P           +  T  + +V+ +I      D++     ++ G 
Sbjct: 287 SLTY---TGKIESFSPASGATFSLMPPDNATGNFNKVVQRIPVRIAIDSSPHIDLIKPGM 343

Query: 410 --PAEVLFTA 417
              A V    
Sbjct: 344 SVSATVDLRT 353



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/218 (10%), Positives = 66/218 (30%), Gaps = 8/218 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V  +    SG + +  + +   + +G  L   +  +     D  +  +      + 
Sbjct: 53  VQADVTWVMPKISGEVMELLINDNQVVKKGETLAVLDHRDYQARYDQARSVVSLKEAALG 112

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--------SKVFNYGISSVYRS 163
            ++       +          + +  L     ++            ++    GI S Y +
Sbjct: 113 VQQQNEKSAKSSITEANSGVVAAQADLSRLKKEFERYQDLLKDGVITRQNFEGIQSQYLT 172

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            + +L++ ++               RA L +  +      NL++ +  S   ++     +
Sbjct: 173 AQAQLSKAQAAVNAAEAQLGSLQASRAQLLADIQSANANLNLYQVDLASSKVISPVSGKI 232

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
               ++    +  Q  ++  I E        F     E
Sbjct: 233 GSLAIQKGSRVSPQTRLMAIIPENSLYVQANFKETQIE 270


>gi|169795885|ref|YP_001713678.1| putative multidrug resistance efflux pump [Acinetobacter baumannii
           AYE]
 gi|213157419|ref|YP_002319464.1| RND family drug transporter [Acinetobacter baumannii AB0057]
 gi|215483373|ref|YP_002325584.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB307-0294]
 gi|301347805|ref|ZP_07228546.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB056]
 gi|301512227|ref|ZP_07237464.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB058]
 gi|301595916|ref|ZP_07240924.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB059]
 gi|169148812|emb|CAM86681.1| putative multidrug resistance efflux pump [Acinetobacter baumannii
           AYE]
 gi|213056579|gb|ACJ41481.1| RND family drug transporter [Acinetobacter baumannii AB0057]
 gi|213987033|gb|ACJ57332.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB307-0294]
          Length = 353

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 94/299 (31%), Gaps = 29/299 (9%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +  F  + E L     + +          +S    +L ++    +S   + ++  +    
Sbjct: 75  DNQFVKKGETLAVLDHRDYQARYDQARSVVSLKEAALGVQQQNEKSARSSIIEANSGVVA 134

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A L+  +K+    ++L +   +++ +    +     +  +L +           +  L
Sbjct: 135 AQADLARLKKEFERYQDLLKDGVITRQNFEGIQSQYLTAQAQLSKAQAAVNAAEAQLGSL 194

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                               Q         + L + +       ++SP++G I       
Sbjct: 195 Q---------------ASRAQLLADIQSANANLNLYQVDLASSKVVSPVSGKIGSLAI-Q 238

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             +       LM I+P +   Y++A     QI+ +  G    ++   Y  +    F   I
Sbjct: 239 KGSRVSPQTRLMAIIPENS-LYVQANFKETQIEKMHIGQKVKLKLDAYPSLN---FTGKI 294

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE---LRNGF--PAEVLFTA 417
           E   P           +  T  + +V+ +I      D++     ++ G    A V    
Sbjct: 295 ESFSPASGATFSLMPPDNATGNFNKVVQRIPVRIAIDSSPHIDLIKPGMSVSATVDLRT 353



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/218 (10%), Positives = 66/218 (30%), Gaps = 8/218 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V  +    SG + +  + +   + +G  L   +  +     D  +  +      + 
Sbjct: 53  VQADVTWVMPKISGEVMELLINDNQFVKKGETLAVLDHRDYQARYDQARSVVSLKEAALG 112

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--------SKVFNYGISSVYRS 163
            ++       +          + +  L     ++            ++    GI S Y +
Sbjct: 113 VQQQNEKSARSSIIEANSGVVAAQADLARLKKEFERYQDLLKDGVITRQNFEGIQSQYLT 172

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            + +L++ ++               RA L +  +      NL++ +  S   ++     +
Sbjct: 173 AQAQLSKAQAAVNAAEAQLGSLQASRAQLLADIQSANANLNLYQVDLASSKVVSPVSGKI 232

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
               ++    +  Q  ++  I E        F     E
Sbjct: 233 GSLAIQKGSRVSPQTRLMAIIPENSLYVQANFKETQIE 270


>gi|303238588|ref|ZP_07325122.1| efflux transporter, RND family, MFP subunit [Acetivibrio
           cellulolyticus CD2]
 gi|302593986|gb|EFL63700.1| efflux transporter, RND family, MFP subunit [Acetivibrio
           cellulolyticus CD2]
          Length = 488

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 123/399 (30%), Gaps = 37/399 (9%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G ++ + +V  I S  SG I     + G ++ +G  L T +  E T+ I   K+S++   
Sbjct: 56  GTVVFD-DVYNITSLTSGRILSADFKEGDKVSEGQVLYTIDSTEITNQIQATKISLEKAS 114

Query: 108 CHIDTEKSALDFLN---------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN---- 154
             +   K+A   L           K  + +  F +    + D +       +  FN    
Sbjct: 115 ESLRQYKNAAADLGLFAKASGMVTKVYINKGDFVNPGTPIADIVDSNMLKLTVPFNLPAN 174

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-LFEKNAVSQ 213
            GI     +  +      ++Y     +   S       S    ++ +      ++   + 
Sbjct: 175 SGIHEGTSAEVILADSGLTVYGTVSKVYESSQAFDDGTSGVNVEIHISNPGAVKEGNQAS 234

Query: 214 NDL-----NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL-KEISRDLE 267
             +        E +  ++   +      +   +            +        ++  + 
Sbjct: 235 AKIGAFLSLTSEPLKNRTNQSIVSTQSGEVENIYIREGSRVSVGTKIVQLKNSAVTNAIN 294

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
               +  +  + L+ LE       I SPI G +V   S +  + A    PL  I   +  
Sbjct: 295 TAAISVKEISNSLSQLESKLGDYVIKSPIKGIVVNKYSKT-GDIASALSPLSTIA-DTGR 352

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
            Y+   +    I+ + KG    V    Y D         + +I    +          YY
Sbjct: 353 LYVDVDIDELYIKQISKGQKTKVLL-EYGDTEY---SGKVYRI----NDSGTEKNGVTYY 404

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
            V + +      DN   L +G    V         A  +
Sbjct: 405 TVRIAL------DNPEGLIDGMNVNVRIITGVKANAAYL 437


>gi|300311270|ref|YP_003775362.1| HlyD family membrane-fusion protein [Herbaspirillum seropedicae
           SmR1]
 gi|124483360|emb|CAM32553.1| HlyD family membrane-fusion protein [Herbaspirillum seropedicae]
 gi|300074055|gb|ADJ63454.1| HlyD family membrane-fusion protein [Herbaspirillum seropedicae
           SmR1]
          Length = 358

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 53/419 (12%), Positives = 122/419 (29%), Gaps = 84/419 (20%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIE---ISVSSSGEILNEDNVVEIKSPFSG 65
           + R+    L    LL ++  +G   W+     +     VSS+G +   +  V+I S   G
Sbjct: 1   MNRSLQHPLFAGLLLVVLAAVGWTGWAWWRDADAPAGLVSSNGRLEATE--VDIGSRLGG 58

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I+   V+ G  +  G  L           +D     ++  R                  
Sbjct: 59  RIRHMLVDEGEAVQAGQVLAYL-------QVDSLHAQLREARA----------------- 94

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                                    +  + G++     L M+ +  R         +  +
Sbjct: 95  -----------------------QQQRASQGVTVAQAQLAMRRSEQRIA-------QALT 124

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                 LS+  + +   + L    A++  +++ +E  + ++  +L     +++     I 
Sbjct: 125 VQRHKSLSAATRRVERSQPLGRMQALTAQEVDDEENTLAEARAQLDAAQAQEEGARAAIR 184

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                              D+   +       +    +E   E+  I +P  G I Y + 
Sbjct: 185 AA---------------EADVASARALLEAAQAATARIEADLEESAIRAPRDGHIQY-RL 228

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
             +     +   L+ ++  S   ++   +  +    V+ G    V              A
Sbjct: 229 AQAGEVVSEGSKLLNLIDLSD-LHMHFFLPAELAGKVRLGQEVRVVLDA---APTDALPA 284

Query: 366 IIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            I  +         + +  N + +  + V  ++T  +       L+ G P         
Sbjct: 285 RITYVSRQAQFTPKAVETANERQKLMFRVKAQLTPSSRGSIAPHLKAGMPGVAWIKTAE 343


>gi|302873644|ref|YP_003842277.1| secretion protein HlyD family protein [Clostridium cellulovorans
           743B]
 gi|307686632|ref|ZP_07629078.1| secretion protein HlyD family protein [Clostridium cellulovorans
           743B]
 gi|302576501|gb|ADL50513.1| secretion protein HlyD family protein [Clostridium cellulovorans
           743B]
          Length = 370

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 91/300 (30%), Gaps = 15/300 (5%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA---LLSSHQKD 198
           + K      +VF      +     +         L    +  +  +L     LL   +++
Sbjct: 66  MSKIQGEVKEVFVEEGKQINEGDVILTINSVQSNLQLEQVNGQVQVLDRRINLLKRAEEE 125

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML---RHINELYDEANLEF 255
            T  KN F+K+   + +   +    Y    E + +    K        I +  ++A  + 
Sbjct: 126 ATHWKNTFDKDNPEEVEFYNKLVNSYIKANEYKVDEAALKKQNYTDDQIKQYKEQAANKA 185

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLT----ILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                +        +     E SKL      L+K+ E+  +L+  +G +  N   +    
Sbjct: 186 DQIYYDTILSFTTEKNQLELEKSKLQTQGDALQKSGEEYKLLASKSGVVHLNSQINKGLV 245

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q    L  I    +   +   +   +   +      ++                +  ID
Sbjct: 246 LQAGTLLGSITNADEELVVEIMLPSSERPRIHNDDEVSIAVSGLNQAEYGTIPGKVLSID 305

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKNTTLAQEIIH 428
              +   NN + + Y++V +K       D     + L  G   E     +  T  +  + 
Sbjct: 306 KDAT--INNEKGEVYFKVKVKPDITTLKDKKGEEVNLTLGMLTETRVKYEKITYMKYFLE 363



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 96/269 (35%), Gaps = 6/269 (2%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +  P  +  +  + +  I+G + WS        V   G I+   N   I S   G +K+ 
Sbjct: 18  KKPPRFMVYIIFIVLFLIVGFLFWSTKSIKTYVVKGQG-IVTTANKAFIMSKIQGEVKEV 76

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            VE G QI +G  +LT   +++   ++     ++ L   I+  K A +   +  +  +K 
Sbjct: 77  FVEEGKQINEGDVILTINSVQSNLQLEQVNGQVQVLDRRINLLKRAEEEATHWKNTFDKD 136

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                E     +  Y        +            ++ + +    N+ D     ++L  
Sbjct: 137 NPEEVEFYNKLVNSYIKANEYKVDEAALKKQNYTDDQIKQYKEQAANKADQIYYDTILSF 196

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQN----DLNQQERIVYKSTLEL-RENIHEQKNMLRHIN 245
               +Q +L   K   + +A+ ++     L   +  V     ++ +  + +   +L  I 
Sbjct: 197 TTEKNQLELEKSKLQTQGDALQKSGEEYKLLASKSGVVHLNSQINKGLVLQAGTLLGSIT 256

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFA 274
              +E  +E      E  R    ++ + A
Sbjct: 257 NADEELVVEIMLPSSERPRIHNDDEVSIA 285


>gi|254255100|ref|ZP_04948417.1| Secretion protein HlyD [Burkholderia dolosa AUO158]
 gi|124899745|gb|EAY71588.1| Secretion protein HlyD [Burkholderia dolosa AUO158]
          Length = 363

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/372 (13%), Positives = 102/372 (27%), Gaps = 75/372 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    SG + +  V +  ++  G  L+  +           +  +      +D
Sbjct: 61  VGGDVTVLAPKVSGFVDRILVTDNQRVKAGDVLVQLD-------ARDYEAKLAQASAEVD 113

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +SA+  L  K  +                                             
Sbjct: 114 AARSAVAELEAKQQL--------------------------------------------- 128

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
              Y          +   A L+    D    + L + +AVS   + + +    K+   + 
Sbjct: 129 --QYAVIGQHAADRNASSAELTRAASDRVRYRELVKADAVSNQIVERADADYAKANAAVE 186

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   +      ++   +     E  T
Sbjct: 187 RSDAALLASKRQLDVL---------------GAQLADARARVNTALAAQRVAALNVEYTT 231

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +  N++      A    PL+ IVP S   +I A     Q++ ++ G  A V 
Sbjct: 232 IRSPVDGYV-GNRTGRVGMLANVGAPLLTIVPASG-LWIDANFKEDQLRKMRAGDRADVS 289

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIE--LRN 407
                     +  ++        S       T  + ++   + +         +E  LR 
Sbjct: 290 LDASGARLHGRVDSLAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGLEQVLRP 349

Query: 408 GFPAEVLFTAKN 419
           G  A V      
Sbjct: 350 GLSAVVTVHTDR 361


>gi|298293704|ref|YP_003695643.1| secretion protein HlyD [Starkeya novella DSM 506]
 gi|296930215|gb|ADH91024.1| secretion protein HlyD family protein [Starkeya novella DSM 506]
          Length = 418

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/294 (11%), Positives = 87/294 (29%), Gaps = 28/294 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     + +          ++    ++  +  ++        +   +    +A L+  Q+
Sbjct: 123 LAVIDQRDYQAAVDQATADVAQAKATIDSQAAQLDEQQAVIAEARAQIDSDKAALTFAQQ 182

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +      L +                 ++  +    I + +  L H     D A  + A 
Sbjct: 183 NDERFTKLAKDGYGP-----------VETAQQTASQIAQAQATLAHDTAALDAAQKQVAI 231

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
               +   L Q + T     + L           + +P+ G +V  ++     + +    
Sbjct: 232 ----LDAQLAQAKATLGHNEAALDTARLNLGYTVLRAPVDG-VVGARTLRVGQFVEPGNE 286

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L+ +VP      I A     Q+  V+ G   ++    +  +     +  +  + P   Q+
Sbjct: 287 LLAVVPLQATYII-ANYKETQLTDVRAGQPVSISVDTFPGVT---IRGFVRSLAPASGQE 342

Query: 378 ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
                 +  T  + +++    +++           +R G   E          A
Sbjct: 343 FALLPPDNATGNFTKIVQRIPVRVDLDPTDPLAGLIRPGMSVETTIRTDEQVPA 396


>gi|149177398|ref|ZP_01856002.1| hypothetical protein PM8797T_18891 [Planctomyces maris DSM 8797]
 gi|148843731|gb|EDL58090.1| hypothetical protein PM8797T_18891 [Planctomyces maris DSM 8797]
          Length = 666

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/361 (10%), Positives = 123/361 (34%), Gaps = 28/361 (7%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G+ + +G  +   +     D    +++ +      +   +  ++    + +    A 
Sbjct: 127 VPEGTMVEKGDVVCELDSSLLVDKEKQQQIQVTQTEAELKQAEENVEIQKTQNESDTSAA 186

Query: 132 E-SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           E +     LD          +  N    ++ ++ +       +   ++          ++
Sbjct: 187 ELALILAKLDLEKFLKGESQRDLNVKEGAITKAREDLQRAEEAFEFSKR---IAKKGYKS 243

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                   + ++K   +     ++   +++ +  +   EL  ++ E+K  L       D 
Sbjct: 244 QNDVEADRINVVKAEIDLEIAKEDLKVEKDYVQTRKHKELEADVDEKKRNL-------DR 296

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ------ 304
              +      +    L+ +Q T+  E S+L  + +      +++P  G +VY        
Sbjct: 297 VIRQGIATQAQFDARLKASQLTYEVEKSELERIREQIVACKLIAPQNGQVVYANQDSGRR 356

Query: 305 -----SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
                        ++ Q ++++ P      + A++   +I  + +G    +R   + +  
Sbjct: 357 SSGEDVIEEGTEVRERQSIIQL-PDFSQMKVDARIHESKISMINQGLPVDIRVDAFPEQL 415

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +    I++++  +    +      + Y+  ++I     + +  +L+ G  AE+      
Sbjct: 416 YR---GIVDQVSSVPISSNWMRPDLKEYKATIRILPD--NGDITKLKPGLTAEIEIRVDQ 470

Query: 420 T 420
            
Sbjct: 471 R 471


>gi|186687097|ref|YP_001870240.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186469400|gb|ACC85199.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
          Length = 481

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 137/369 (37%), Gaps = 19/369 (5%)

Query: 15  ASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           +    + L+++  I+G+ + WSI   I I+V   G ++   NVV ++S  +G +    ++
Sbjct: 31  SPRSWLPLVALGSIVGVAVIWSIYGRIPITVEGKGVLIYPSNVVPLQSKSAGQLMALNIK 90

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  I +G  L T +  E    +  ++  +  L    +   S       +    +     
Sbjct: 91  VGDVIKKGQVLATIDQAELRKQLQQQQAKLTQLESQDEAVGSLQGQRLQQEKRSQSQQSH 150

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS---IYLNRLDLENK--SSLL 188
             +Q +  L           N  I    + L+ +L + ++   I+L R+++  +      
Sbjct: 151 YLQQRILELRTITPLLKTKGNTSIGQQRQGLQQRLLQAQALNPIFLQRMEIRRQFKKEGA 210

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            +   +   +   ++NL EK +  QN L + +    ++  + REN+    ++   + EL 
Sbjct: 211 ISGDEALTAEQEYLQNL-EKISDIQNQLKELDVKTTQTEKDYRENLSTISDLQAQLKELD 269

Query: 249 DEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            +        L+ ++    ++++ +R  A    +L       +   I+S  +G I+   +
Sbjct: 270 SKQASVAQQDLESVTTRKKEIQEVKREIAQLEVQLG------DNSQIISQYSGRILEI-T 322

Query: 306 FSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            +     +    L  I   +              + + +K G T  +        R    
Sbjct: 323 QTPGQVVEAGTRLATIEAENPKSKLIGVTYFPVAEGKKIKAGMTIQITPQTVKRERFGGI 382

Query: 364 KAIIEKIDP 372
            A +  I  
Sbjct: 383 VANVTSISR 391


>gi|23016152|ref|ZP_00055911.1| COG1566: Multidrug resistance efflux pump [Magnetospirillum
           magnetotacticum MS-1]
          Length = 343

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 107/378 (28%), Gaps = 86/378 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + ++  I    +G + +    +   + +G  L+  ++              ++ R  +D
Sbjct: 39  VDGDITAISPKVAGHVVELAARDNRMVAKGDVLVRIDE--------------RDYRARLD 84

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                                                        + +    L     R+
Sbjct: 85  ----------------------------------------EAAGQVKARLAQLVQIDDRV 104

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                         S  +A +     D    + L  ++ VS+   +  +    ++   L 
Sbjct: 105 AVQESVIAQSGASISAAKAEVVRATADFERSRKLVREDYVSRQRFDISQADAARAAAGLT 164

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +  + +   R ++ L  E N+  A                     + L + E   E   
Sbjct: 165 GSGAQLQGARRQLSVLASEHNVALAQ---------------LEQAKAALILAETELEATV 209

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G I  N++     Y +  Q L+ +VP     +I A     QI  +K G  A ++
Sbjct: 210 IRSPVDGVI-GNRAVRDGQYVRPGQMLLAVVPLGN-VWIDANFKETQIGRMKPGNRAEIK 267

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDN 401
              +           ++   P    +         T  + +      V +++   +    
Sbjct: 268 VDAFPGA---VITGTVDSFAPASGAKFSLLPPENATGNFTKVVQRIPVRIRVDPDSPLAG 324

Query: 402 NIELRNGFPAEVLFTAKN 419
             +LR G    V    ++
Sbjct: 325 --QLRPGLSVVVKVDTRD 340


>gi|332709046|ref|ZP_08429016.1| ABC exporter membrane fusion protein, DevB family [Lyngbya
           majuscula 3L]
 gi|332352235|gb|EGJ31805.1| ABC exporter membrane fusion protein, DevB family [Lyngbya
           majuscula 3L]
          Length = 439

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 53/353 (15%), Positives = 134/353 (37%), Gaps = 20/353 (5%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFS---GIIKKFQVENGSQILQGTPLLTFEDI- 90
           +   P   +V++ G    E  V+++ +P +     + +  V+ G ++     +   E+  
Sbjct: 53  ASKTPAIRAVTALGRFEPEGEVIQLAAPTTFQAPRVAQLLVKEGDKVGANQLIAIMENRG 112

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSA-----LDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                ++  K  +K  R +++  K+      +     K   LE  +  ++E L   + + 
Sbjct: 113 RLQADLERAKAEVKVSRANLEKVKAGAKSGTIAAQEAKIKRLEAEYRGQKEALQTRIDRL 172

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            +   +      ++V R L+ +L  +++ +     LE   ++  + L S + ++   +  
Sbjct: 173 QTQLQETQQEKDATVRR-LEAQLRNVQADFQRYQQLERDGAIAISELDSRRLNVETAQES 231

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +   ++         +     +L+E +  +K  L  +    +EA        +    D
Sbjct: 232 VSEAIANRTQ------TISTLREQLKEAMVNRKQTLAVVEAQINEAKATLEEIKEVRLVD 285

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           + Q        M+++   E   +   + SP+   ++   ++       Q + ++++    
Sbjct: 286 IRQADAELEMAMAQVKQAEAELKFAYVHSPLDSQVLKINTY-PGETVDQEKGIVELGQTD 344

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           ++  + A+V    I  VK G   T+     A   E K    + +I   I +QD
Sbjct: 345 QMMVV-AEVYESDIGKVKLGQKVTIISESKAF--EGKLNGSVVRIGQQIDKQD 394


>gi|227519178|ref|ZP_03949227.1| accessory protein family proteinue [Enterococcus faecalis TX0104]
 gi|255976372|ref|ZP_05426958.1| 4'-phosphopantetheinyl transferase entD [Enterococcus faecalis T2]
 gi|312905257|ref|ZP_07764374.1| bacteriocin secretion accessory protein [Enterococcus faecalis
           TX0635]
 gi|227073377|gb|EEI11340.1| accessory protein family proteinue [Enterococcus faecalis TX0104]
 gi|255969244|gb|EET99866.1| 4'-phosphopantetheinyl transferase entD [Enterococcus faecalis T2]
 gi|310631418|gb|EFQ14701.1| bacteriocin secretion accessory protein [Enterococcus faecalis
           TX0635]
 gi|315167623|gb|EFU11640.1| bacteriocin secretion accessory protein [Enterococcus faecalis
           TX1341]
          Length = 455

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 58/444 (13%), Positives = 141/444 (31%), Gaps = 41/444 (9%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            + H    + +    I+ +     + +    EI + +  ++     V +++ P    IK 
Sbjct: 14  SQQHHTFYRWVLYPVILFLCLGGFFLVFAKKEIVIRTPAQLTA-QKVEKLQVPIEAKIKA 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             ++    + +G  L+TF+     +     +     +       +  +D L ++ ++ E 
Sbjct: 73  NNLKENQTVKKGESLVTFDTTSLQNEKTQIEQENTTIEQQKSAAQIFIDSLMSEQNLFET 132

Query: 130 AFE-SREEQLLDFLGKYHSTCSKVFNYGISSVYRSL------KMKLTRMRSIYLNRLDLE 182
                   Q+  FL +  +T   +    +++           +    ++      + +LE
Sbjct: 133 EDAFGYSNQVKSFLAEKEATLYALKQSEVATQKEQETYDKAKEQLEKQLTMRQKEQRELE 192

Query: 183 NKSSLL--RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKN 239
              +       L     ++T    L++       +  +Q++ V  + L  + E I ++K 
Sbjct: 193 QVRTAWIDEQSLEGFSPEITSKYQLWKVQLTDAPE--EQKKQVKATILATIDELITQKKK 250

Query: 240 MLRHIN----------ELYDEANLEFANYLKEISRDLEQNQRTFADEMS-------KLTI 282
            +  +              +E N +     +     L   +   A+           L  
Sbjct: 251 EIEQLQVEQAKLVVPSTTENEINSQKEKGKQSKELALATAKEKVAELTETQKKNDIALKT 310

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH--SKLTYIRAKVTPKQIQ 340
           + +   Q T+ +PI GTI  N    +     +   L ++ P   +      A +   +  
Sbjct: 311 INEQLTQSTLKAPITGTIHLNAEVENQLEVPKGTTLAEVYPEHKNSELRFTALLPTSESM 370

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            VK G     +      +  K     +++I     +         +Y +   +       
Sbjct: 371 RVKPGMDIHFKLDK-KGVATKTINGTLKEIS----ENSTTTDQGTFYTIKGILNPS---- 421

Query: 401 NNIELRNGFPAEVLFTAKNTTLAQ 424
           +N   R G   E+       T  Q
Sbjct: 422 DNFTSRYGLTGELSLIVGKKTYWQ 445


>gi|327543402|gb|EGF29827.1| efflux transporter, RND family, MFP subunit [Rhodopirellula baltica
           WH47]
          Length = 620

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 65/451 (14%), Positives = 140/451 (31%), Gaps = 90/451 (19%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWS-ILLP------------------IEI 42
           H     +  R     +  +  L +IG+ G   +   +                     + 
Sbjct: 39  HPASKADHPRTGGIMVGLLICLVLIGVGGYFGYQQYIAKQSTISADDLIVSEVVKEAFDH 98

Query: 43  SVSSSGEILNEDNVVEIKSPF--SGIIKKFQ--VENGSQILQGTPLLTFEDIETTDLIDL 98
           +V   GEI +  N   I       G        ++ GS++ +G  L+  +       +  
Sbjct: 99  TVVEQGEIESSSNTEIICQIESRGGSGTSILWVIDEGSRVRKGDKLVELDSSNLEVQLKE 158

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            ++ +     ++ T  +          ++E+A  +REE L             V+     
Sbjct: 159 NRIEVIVAEANVATASA----------MVEQAKIAREEYL-----------EGVYKTDEK 197

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           ++   + +    +R   L                      +   + L  K  V    L  
Sbjct: 198 AILSEIAVAEQELRKAQLA---------------------IGSTERLVAKGLVKSLQLEA 236

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  +  +  +L       K +    N    +  ++F + +      L   +    +E  
Sbjct: 237 DKFALANAQNQLESAQGRLKVLQ---NLTRRKMLVQFDSDIDAAEATLSAARSELLEEQQ 293

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSN-----YAQQS------QPLMKIVPHSKL 327
           +L  +E+  E   + +P  G +V+   +SS         +        Q ++++ P    
Sbjct: 294 ELAEVEQQIEVCVMYAPTDGVVVHANRYSSRGGNAEFVVEAGAQVRERQAIIEL-PDPTR 352

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +R KV   ++  +K+G  A +R     D+     K  + K++           + + Y
Sbjct: 353 MQVRCKVNESRVTLLKRGMPAKIRLDALPDV---VLKGRVTKVNRYAEPGSWFSSSVKEY 409

Query: 388 EVILKITDLAFSDNNIELRNGFPA--EVLFT 416
                 T +   D    +R G  A  EV   
Sbjct: 410 A-----TTIEIIDPPEIIRTGMTAAVEVFIQ 435


>gi|307824054|ref|ZP_07654281.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
 gi|307734838|gb|EFO05688.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
          Length = 401

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/340 (14%), Positives = 111/340 (32%), Gaps = 35/340 (10%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            +I    + L    +   V  +   ++  Q  D L +     ++V    +     +L   
Sbjct: 56  AYITGNLAPLKAQTSGTVVDVRVDNTQHVQQGDVLVRLDGLQAQV---ALERAEANLADS 112

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           + ++ + +     L  K +   A+L+  +KDL   +++    AVS   +   E  V +  
Sbjct: 113 VRQIETAFSQADMLRQKLASKEAILNRSRKDLARYRSVAGDGAVSAQQIENSEFQVRELE 172

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            ++R+   E       I       N +                      ++ L       
Sbjct: 173 ADVRQIRAELGGAEALIQNTSPADNPKVLQA------------------VAALKQAYLDN 214

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            ++ I++P++G +   ++       +   PL+ IVP     ++ A     ++  V+ G  
Sbjct: 215 ARQQIVAPVSGFVAK-RTIQPGEQVRPETPLLAIVPLD-YLWVEANFLENELADVQPGQP 272

Query: 348 ATVRFPHY--ADIREKKFKAIIEKIDPIISQQDNNLQTQEYY----EVILKITDLAFSDN 401
             +    Y    +   + + +      +      +  T  Y      V +++   A    
Sbjct: 273 VEITVDLYGSDVVYHGEVQGLGAGTGSVFGLLPPDNATGNYIHIVERVPVRVGLRAEELK 332

Query: 402 NIELRNGFPAEVLFTA--KNTTLAQEIIHPITDNWPKIFE 439
              LR G  A V         ++ +    P+T      ++
Sbjct: 333 ANPLRPGLSAVVRIDTVHPGRSVLE----PLTTTPATAYK 368



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 61/160 (38%), Gaps = 9/160 (5%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
             N+  +K+  SG +   +V+N   + QG  L+  + ++    ++  + ++ +    I+T
Sbjct: 59  TGNLAPLKAQTSGTVVDVRVDNTQHVQQGDVLVRLDGLQAQVALERAEANLADSVRQIET 118

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDF--------LGKYHSTCSKVFNYGISSVYRSL 164
             S  D L  K    E       + L  +        +       S+     + +  R +
Sbjct: 119 AFSQADMLRQKLASKEAILNRSRKDLARYRSVAGDGAVSAQQIENSEFQVRELEADVRQI 178

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           + +L    ++  N    +N   +L+A+ +  Q  L   + 
Sbjct: 179 RAELGGAEALIQNTSPADNPK-VLQAVAALKQAYLDNARQ 217


>gi|222087170|ref|YP_002545705.1| multidrug resistance efflux protein [Agrobacterium radiobacter K84]
 gi|221724618|gb|ACM27774.1| multidrug resistance efflux protein [Agrobacterium radiobacter K84]
          Length = 406

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 86/264 (32%), Gaps = 14/264 (5%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +L+     + +  L+   ++ + +  +A L+  Q     ++       ++Q    + +  
Sbjct: 144 ALEQAQASLVTEQLSLHTIDAQIAAGQATLAQSQAQKVALEATVRGAQITQTRAAELQAK 203

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +T  L            ++           AN +  +     Q + T     +    
Sbjct: 204 SVGTTASLDSANIALDQAKANLVGGDAAIASAQAN-INLLQAQRTQAESTIKGLEAARDK 262

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
             +      + +P  G +V N+S    +     Q LM IVP  +  YI A     QIQH+
Sbjct: 263 AARDLSFTVLKAPYDG-VVGNRSVQEGDLVSPGQKLMAIVPT-RQLYIDANFKETQIQHL 320

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKIT 394
             G    V    Y+D         +E I P           +      T+    V ++I 
Sbjct: 321 VPGSKVNVHVDAYSDH---PIVGTVESISPASGSVFSLLPPENATGNFTKIIQRVPVRIA 377

Query: 395 DLAFSDNNIELRNGFPAEVLFTAK 418
               + ++  LR G    V    +
Sbjct: 378 LPQDALDSGRLRAGLSVVVDVDTR 401



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 81/262 (30%), Gaps = 19/262 (7%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E ++  I+   +G + K  V    Q+  G  L T +D +        K++++  +  + T
Sbjct: 102 EGDIATIQPKVTGYVAKVNVVANQQVKTGDVLATLDDGDY-------KLALEQAQASLVT 154

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFL-----GKYHSTCSKVFNYGISSVYRSLKMK 167
           E+ +L  ++ +    +      + Q +         +   T +            SL   
Sbjct: 155 EQLSLHTIDAQIAAGQATLAQSQAQKVALEATVRGAQITQTRAAELQAKSVGTTASLDSA 214

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              +     N +  +   +  +A ++  Q   T  ++   K   +  D   ++       
Sbjct: 215 NIALDQAKANLVGGDAAIASAQANINLLQAQRTQAESTI-KGLEAARDKAARDLSFTVLK 273

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                 +  +      +     +           I  + ++ Q       SK+ +     
Sbjct: 274 APYDGVVGNRSVQEGDLVSPGQKLMAIVPTRQLYIDANFKETQIQHLVPGSKVNVHVDAY 333

Query: 288 EQKTIL------SPIAGTIVYN 303
               I+      SP +G++   
Sbjct: 334 SDHPIVGTVESISPASGSVFSL 355


>gi|168482772|ref|ZP_02707724.1| BlpC ABC transporter [Streptococcus pneumoniae CDC1873-00]
 gi|172043642|gb|EDT51688.1| BlpC ABC transporter [Streptococcus pneumoniae CDC1873-00]
 gi|332203699|gb|EGJ17766.1| bacteriocin secretion accessory family protein [Streptococcus
           pneumoniae GA47368]
          Length = 453

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 59/439 (13%), Positives = 143/439 (32%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEIAPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +             ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
              E          +++   ++      +T         +S   +++ ++T+++      
Sbjct: 132 GEDEFGYHNTFMNFTKQSHDIELGITKTNTEVSNQANLSNSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +     +++ + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIINNRARLPTGNPHQSILNRYLVASQGQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P  G +  N  F   N       + +I P    ++   I   V    +  + KG 
Sbjct: 312 NTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPIITDTREVLITYYVASDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGN-HGITIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|163784702|ref|ZP_02179519.1| hypothetical protein HG1285_12532 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880029|gb|EDP73716.1| hypothetical protein HG1285_12532 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 374

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 126/361 (34%), Gaps = 51/361 (14%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I KF  + G ++ +G  L   +               K+    ++  K  ++ L  K
Sbjct: 53  SGKIIKFYKKEGDKVKKGEILAKIDP--------------KDYVLQLEKIKKEINSLIFK 98

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              LE+  +   +Q+               +  I  V  SLK       S+      +++
Sbjct: 99  KQALEEKKDRINKQI---------------DKNIQIVKISLKENKKLQDSLLSQIKGIDS 143

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER---IVYKSTLELRENIHEQKNM 240
           + S L+       KD     NL  K+   +  L + E    ++      L   + + K  
Sbjct: 144 RLSQLK-------KDRERFLNLVNKDLAPRRKLEEIETNIDVLSSQKEALLAKLEQLKLQ 196

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            + +NE      ++     +  S     + +  +   SK  I E   E   + +P  G I
Sbjct: 197 KQSLNEKVKLTKIKKLQIKEIESEISSLSSKINSLRKSKEDI-ENLIEYTKLRAPFDGVI 255

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              +  S         P+  I P +   YI+  +   +++ VK G  A +    Y D   
Sbjct: 256 AK-RFKSVGEIVSSGVPVFAIYPLND-IYIKVLLEETKLKGVKIGNKAIIHIDAYPDEY- 312

Query: 361 KKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIELRN-GFPAEVL 414
             F+ ++ +I P  + +      ++   E+ +V  +I   +      IEL   G   EV 
Sbjct: 313 --FEGVVYEISPAAASKFALVPRDITAGEFTKVAQRIPVKIKIIRGKIELLKVGMGGEVE 370

Query: 415 F 415
            
Sbjct: 371 I 371


>gi|325121236|gb|ADY80759.1| multidrug resistance secretion protein [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 383

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 114/371 (30%), Gaps = 65/371 (17%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           +I S  SG + +  V++   + +G  L+  +D +    +   +  +   +       +  
Sbjct: 68  QITSMVSGQVAQVVVKDTQTVHRGDVLVRIDDRDAKIALAQAEAELAKAKRQYKQTAANS 127

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             LN++  V      S + Q+      Y     ++                         
Sbjct: 128 SSLNSQVVVRADEINSAKAQVAQAQADYDKAALELNRRA--------------------- 166

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIH 235
                                      L    AVS+ +L + +  V   K+ LEL +   
Sbjct: 167 --------------------------QLAASGAVSKEELTKAQSAVETAKAGLELAKAGL 200

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            Q +  R   E    AN      + E S              + +   +   E+  I +P
Sbjct: 201 AQASSSRKAAESTLAANEALIQGVSETST------PDVQVAQAHVEQAQLDLERTVIRAP 254

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +   ++            +M IVP +   Y+ A     Q++ V+ G   T+    Y
Sbjct: 255 VDGVVTR-RNIQVGQRVAPGTSMMMIVPLND-LYVDANFKESQLKKVRPGQAVTLTSDLY 312

Query: 356 AD-----IREKKFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRN 407
            D      +   F         +I  Q+      +  +   V + +     +++ + +  
Sbjct: 313 GDDVEYHGKVMGFSGGTGSAFALIPAQNATGNWIKVVQRLPVRIALDPKELAEHPLRVGL 372

Query: 408 GFPAEVLFTAK 418
              A+V  +AK
Sbjct: 373 SMEAKVDLSAK 383


>gi|147677793|ref|YP_001212008.1| membrane-fusion protein [Pelotomaculum thermopropionicum SI]
 gi|146273890|dbj|BAF59639.1| membrane-fusion protein [Pelotomaculum thermopropionicum SI]
          Length = 513

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 101/362 (27%), Gaps = 106/362 (29%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           IIKK  V+ G ++  G  L               +    NL   +    ++L     K +
Sbjct: 91  IIKKIYVKVGDRVTAGQLLA--------------EQESINLEAQLTQASASLKAATAKLE 136

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +L+      E                                                  
Sbjct: 137 LLKNGARPEE------------------------------------------VAQARENL 154

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            + +A     +  L   + L+E+ AVS+ D +        +  +L++     K +L    
Sbjct: 155 KIAQAAYDLAKAKLERYQKLYEEGAVSRADYDTANNEWINAEAKLKQADESLKLLLAG-- 212

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI----- 300
                              D+   +       ++  + +   E   + SPI G +     
Sbjct: 213 ---------------NRPEDIAAAEAQVESSTAQFQVAKSDLEGTKMFSPINGIVSAVNG 257

Query: 301 -------VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
                    N + S             IV  S+   ++A+V    I  ++ G  A     
Sbjct: 258 AEGQRAAANNNNISGGGL---------IVIISEALQLKAQVNEADIGKLQVGQKAEFTVN 308

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            + D     F   +  I P    Q   +   + Y+ ++++ +     N   L  G PA V
Sbjct: 309 SFPDRI---FTGRVRSISP----QAYTVSNVQIYDAVIQLDE-----NQKGLLAGMPANV 356

Query: 414 LF 415
             
Sbjct: 357 NI 358


>gi|152991462|ref|YP_001357184.1| major facilitator superfamily multidrug-efflux transporter
           [Nitratiruptor sp. SB155-2]
 gi|151423323|dbj|BAF70827.1| multidrug-efflux transporter, MFS family [Nitratiruptor sp.
           SB155-2]
          Length = 371

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 50/361 (13%), Positives = 124/361 (34%), Gaps = 50/361 (13%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G + K   + G  + +   L   +D +        +  I +L+   +  +   + L + 
Sbjct: 51  GGKVVKMAKKEGEDVQKNELLALIDDRDFVIEKKRLQSQIDSLKQKSEALRIKKEKLAHD 110

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +        + ++LD   K      + F Y I++                        
Sbjct: 111 IAI--------QREILDNTRKKLKKDIEAFGYEIAAD----------------------- 139

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +A L    +DL   ++L++++ + +  L + E         +R    +   +   
Sbjct: 140 -----KAKLKQTTRDLRRYRSLYQRHLIQKEKLEKIETQKDMLEDGIRAKTAKLMALKVD 194

Query: 244 INELYDEANLEFANYL--KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           +  +  +  L   +    KE+S+++   Q+      +    +E   E   + +PI G I 
Sbjct: 195 LANIDQKEALLQNSLQSIKELSKEIASLQKRVEALQASKKEIENKIEYCRLYAPIEGRIA 254

Query: 302 YNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                      ++  P+  IV P     ++   ++ K++  V  G    +    + D + 
Sbjct: 255 KKYIN-IQRVVKKGSPVYSIVDPKD--LHVEVLLSEKKLHGVVPGNPVEIWVDAFKDRKY 311

Query: 361 KKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILK-ITDLAFSDNNIELRNGFPAEVLF 415
                 +E I P  +        ++ + E+ ++  + +  ++  +   +L+ G  AEV  
Sbjct: 312 ---HGKVESILPASAATFSLVPRDIASGEFTKLDQRFVVRISLENPTPDLKVGMGAEVAI 368

Query: 416 T 416
            
Sbjct: 369 K 369


>gi|146307757|ref|YP_001188222.1| secretion protein HlyD family protein [Pseudomonas mendocina ymp]
 gi|145575958|gb|ABP85490.1| secretion protein HlyD family protein [Pseudomonas mendocina ymp]
          Length = 349

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 55/369 (14%), Positives = 113/369 (30%), Gaps = 76/369 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            +  +  + S  +  I+K  V +   +  G  L   ED +          +++  +    
Sbjct: 42  VQGEITRVSSQLNARIEKVLVRDNQHVEAGQLLAVLEDADFRLARQRALAALQTHQAERA 101

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +S LD                                       S +  SL       
Sbjct: 102 QAQSKLD------------------------------------QQASLIAASLADVAASQ 125

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            ++   +LDL    +L +    S ++    +  L   N V+++ + + +  +     ++ 
Sbjct: 126 ATLERAQLDLGRAQTLRKPGYVSEER----VTTLAADNRVARSQVAKAQADLQAQRQQVA 181

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E K +   I     +                             L   +    +  
Sbjct: 182 SLEAELKRLDALILSAQAD-----------------------------LEQADLNLSRTQ 212

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +PI+G +   +S       Q    L+ +VP  +  +I+A     QI  +  G TA + 
Sbjct: 213 IHAPISGMV-GQRSAREGQVVQSGAYLLSLVP-DQAIWIQANFKETQIGRMYPGQTAELL 270

Query: 352 FPHYADI-REKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELR 406
           F  Y D   E +  ++        S    +  T  + +V+    +K++  A +     +R
Sbjct: 271 FDSYPDTPIEGRIDSLFAASGAQFSLLPPDNATGNFTKVVQRIPVKLSFAADNPLRGLIR 330

Query: 407 NGFPAEVLF 415
            G   EV  
Sbjct: 331 PGMSVEVTV 339


>gi|325122301|gb|ADY81824.1| putative multidrug resistance efflux pump [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 353

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 98/310 (31%), Gaps = 34/310 (10%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           ++ L N   V++K          D+  +Y    S V     S    +L ++    +S   
Sbjct: 69  MELLINDNQVVKKGETLAVLDHRDYQARYDQARSVV-----SLKEAALGVQQQNEKSAKS 123

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           + ++  +     +A L+  +K+    ++L +   +++ +    +     +  +L +    
Sbjct: 124 SIIEAHSGVVAAQADLTRLRKEFERYQDLLKDGVITRQNFEGVQSQYLTAQAQLSKAQAA 183

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                  +  L                    Q         + L + +       ++SP+
Sbjct: 184 VNAAEAQLGSLQ---------------ASRAQLLADIQSANANLNLYQVDLASSKVVSPV 228

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G I         +       LM I+P +   Y++A     QI+ +  G    ++   Y 
Sbjct: 229 NGKIGSLAI-QKGSRVSPQTRLMAIIPENS-LYVQANFKETQIEKMHIGQKVELKLDAYP 286

Query: 357 DIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE---LRNGF 409
            +        IE   P           +  T  + +V+ +I      D++     ++ G 
Sbjct: 287 SLTY---SGKIESFSPASGATFSLMPPDNATGNFNKVVQRIPVRIAIDSSPHIDLIKPGM 343

Query: 410 --PAEVLFTA 417
              A V    
Sbjct: 344 SVSATVDLRT 353



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/218 (10%), Positives = 66/218 (30%), Gaps = 8/218 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V  +    SG + +  + +   + +G  L   +  +     D  +  +      + 
Sbjct: 53  VQADVTWVMPKISGEVMELLINDNQVVKKGETLAVLDHRDYQARYDQARSVVSLKEAALG 112

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--------SKVFNYGISSVYRS 163
            ++       +          + +  L     ++            ++    G+ S Y +
Sbjct: 113 VQQQNEKSAKSSIIEAHSGVVAAQADLTRLRKEFERYQDLLKDGVITRQNFEGVQSQYLT 172

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            + +L++ ++               RA L +  +      NL++ +  S   ++     +
Sbjct: 173 AQAQLSKAQAAVNAAEAQLGSLQASRAQLLADIQSANANLNLYQVDLASSKVVSPVNGKI 232

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
               ++    +  Q  ++  I E        F     E
Sbjct: 233 GSLAIQKGSRVSPQTRLMAIIPENSLYVQANFKETQIE 270


>gi|293608048|ref|ZP_06690351.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828621|gb|EFF86983.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 355

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 98/310 (31%), Gaps = 34/310 (10%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           ++ L N   V++K          D+  +Y    S V     S    +L ++    +S   
Sbjct: 71  MELLINDNQVVKKGETLAVLDHRDYQARYDQARSVV-----SLKEAALGVQQQNEKSAKS 125

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           + ++  +     +A L+  +K+    ++L +   +++ +    +     +  +L +    
Sbjct: 126 SIIEAHSGVVAAQADLTRLRKEFERYQDLLKDGVITRQNFEGVQSQYLTAQAQLSKAQAA 185

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                  +  L                    Q         + L + +       ++SP+
Sbjct: 186 VNAAEAQLGSLQ---------------ASRAQLLADIQSANANLNLYQVDLASSKVVSPV 230

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G I         +       LM I+P +   Y++A     QI+ +  G    ++   Y 
Sbjct: 231 NGKIGSLAI-QKGSRVSPQTRLMAIIPENS-LYVQANFKETQIEKMHIGQKVELKLDAYP 288

Query: 357 DIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE---LRNGF 409
            +        IE   P           +  T  + +V+ +I      D++     ++ G 
Sbjct: 289 SLTY---SGKIESFSPASGATFSLMPPDNATGNFNKVVQRIPVRIAIDSSPHIDLIKPGM 345

Query: 410 --PAEVLFTA 417
              A V    
Sbjct: 346 SVSATVDLRT 355



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/218 (10%), Positives = 66/218 (30%), Gaps = 8/218 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V  +    SG + +  + +   + +G  L   +  +     D  +  +      + 
Sbjct: 55  VQADVTWVMPKISGEVMELLINDNQVVKKGETLAVLDHRDYQARYDQARSVVSLKEAALG 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--------SKVFNYGISSVYRS 163
            ++       +          + +  L     ++            ++    G+ S Y +
Sbjct: 115 VQQQNEKSAKSSIIEAHSGVVAAQADLTRLRKEFERYQDLLKDGVITRQNFEGVQSQYLT 174

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            + +L++ ++               RA L +  +      NL++ +  S   ++     +
Sbjct: 175 AQAQLSKAQAAVNAAEAQLGSLQASRAQLLADIQSANANLNLYQVDLASSKVVSPVNGKI 234

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
               ++    +  Q  ++  I E        F     E
Sbjct: 235 GSLAIQKGSRVSPQTRLMAIIPENSLYVQANFKETQIE 272


>gi|83591149|ref|YP_431158.1| secretion protein HlyD [Moorella thermoacetica ATCC 39073]
 gi|83574063|gb|ABC20615.1| Secretion protein HlyD [Moorella thermoacetica ATCC 39073]
          Length = 398

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 59/393 (15%), Positives = 131/393 (33%), Gaps = 42/393 (10%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +     S++++G I     +   K P  G I+   V+ G+++ QG  L   +  E   
Sbjct: 38  AAIAEERDSLTATGTIEARTAMAAFKVP--GKIETLLVDEGARVEQGQELARLDSSELNA 95

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   + +    +     E  A + +  +   +E   +  E  + +          +V  
Sbjct: 96  KLTQAEGAYAAAQGQ---ESQASNNVTYQSQQIEAKIKQAEAGVAEAQVGVKDAQDQVNA 152

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +          +   +    N  DL ++  LL    +   + L   KN +E+   +QN
Sbjct: 153 AEVG---------VKDAKDQLNNAKDLYDRLRLLHDQGAIDDRKLEEAKNGYER---AQN 200

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             N  +    ++         + +     +++             ++ +   +  Q   A
Sbjct: 201 AYNAAQISYERAQNAYNAAQKKLQEAQALLDQAISARTGVAVAQAQQEAAAGQVKQAGGA 260

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT--YIRA 332
            E +K  + +       + +PIAG I   +            P+ +I   + L   Y++ 
Sbjct: 261 VEEAKTYLAD-----AILKAPIAGFITQ-KLLEQGEMVNAGTPVFEI---TDLLHTYVKV 311

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY------ 386
            ++ K+I  V  G  A +          K FK  +  I+             +Y      
Sbjct: 312 YISEKKIARVHLGQEAEITVDALP---GKVFKGKVVWINDAGEFAVKKAINDQYEHDIRS 368

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +EV + +      + ++ L+ G  A V      
Sbjct: 369 FEVKIDVP-----NPDLVLKTGMTARVKILEGK 396


>gi|293608992|ref|ZP_06691295.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829565|gb|EFF87927.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 383

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 114/371 (30%), Gaps = 65/371 (17%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           +I S  SG + +  V++   + +G  L+  +D +    +   +  +   +       +  
Sbjct: 68  QITSMVSGQVAQVVVKDTQTVHRGDVLVRIDDRDAKIALAQAEAELAKAKRQYKQTAANS 127

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             LN++  V      S + Q+      Y     ++                         
Sbjct: 128 SSLNSQVVVRADEINSAKAQVAQAQADYDKATLELNRRA--------------------- 166

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIH 235
                                      L    AVS+ +L + +  V   K+ LEL +   
Sbjct: 167 --------------------------QLAASGAVSKEELTKAQSAVETAKAGLELAKAGL 200

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            Q +  R   E    AN      + E S              + +   +   E+  I +P
Sbjct: 201 AQASSSRKAAESTLAANEALIQGVSETST------PDVQVAQAHVEQAQLDLERTVIRAP 254

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +   ++            +M IVP +   Y+ A     Q++ V+ G   T+    Y
Sbjct: 255 VDGVVTR-RNIQVGQRVAPGTSMMMIVPLND-LYVDANFKESQLKKVRPGQAVTLTSDLY 312

Query: 356 AD-----IREKKFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRN 407
            D      +   F         +I  Q+      +  +   V + +     +++ + +  
Sbjct: 313 GDDVEYHGKVMGFSGGTGSAFALIPAQNATGNWIKVVQRLPVRIALDPKELAEHPLRVGL 372

Query: 408 GFPAEVLFTAK 418
              A+V  +AK
Sbjct: 373 SMEAKVDLSAK 383


>gi|325679198|ref|ZP_08158789.1| efflux transporter, RND family, MFP subunit [Ruminococcus albus 8]
 gi|324109127|gb|EGC03352.1| efflux transporter, RND family, MFP subunit [Ruminococcus albus 8]
          Length = 463

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 52/381 (13%), Positives = 121/381 (31%), Gaps = 60/381 (15%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  ++S++G ++    V       S  + + +V  G  + +G  L  F+  E  +  D  
Sbjct: 52  LSETISTTGSVIGNGTVDVTTKL-SATVSEVKVSLGDVVKEGDLLCVFDSTELKEEYDDL 110

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  + N                          + + +   D   +   +        +  
Sbjct: 111 KKQLDN-------------------------SDKKTQSGHDKNARDLESAKNKKQTALDR 145

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             R++   +      Y     L  + +                       A+   D    
Sbjct: 146 AQRAIDKAIKERDDAYEKYNKLVGEFNA----------------------AIDAGDELYD 183

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL-EQNQRTFADEMS 278
              V  +  +++  +    + +    E Y++ + ++ + ++ I   +  +   +      
Sbjct: 184 YDTVNATLEQMKPTLTTLDDAVTAAQEAYNDTSAQYDDTIQGIQDIIDAEAYDSTDSIQK 243

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           ++  +++  +Q  + +P +G I              +  LM IV ++  T I   V    
Sbjct: 244 QMDKIQEQIDQCEVYAPQSGIITVLNVNE--GSLPSAPTLMTIV-NTDQTVIELTVRETD 300

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  + +G  A V      D    +F A I +I  ++S      +    Y+V + +     
Sbjct: 301 ITKISEGMRAIVTSKVLPDE---EFPAKITRIVNVVSTDTTAAEPTSGYKVEVTLDQP-- 355

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
              N +L  G  A V    K+
Sbjct: 356 ---NDKLLIGMSATVDVVIKD 373


>gi|256397443|ref|YP_003119007.1| efflux transporter RND family, MFP subunit [Catenulispora
           acidiphila DSM 44928]
 gi|256363669|gb|ACU77166.1| efflux transporter, RND family, MFP subunit [Catenulispora
           acidiphila DSM 44928]
          Length = 462

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 52/386 (13%), Positives = 112/386 (29%), Gaps = 39/386 (10%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               +   V +   +  +  +  + +   G + +  V +G  +  G  LL  +  +    
Sbjct: 38  AYGAVTQVVEAPATVTPKTQI-TVNATAGGSVAQLMVADGQHVTAGQTLLRIDSPDAQAQ 96

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++  K +            S    ++           S  E L D   +     ++    
Sbjct: 97  LNAAKAADAQAAAQGKRSSSGSSAIDF----------SESESLADANAQKSFDAAQTTAE 146

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            I+       +K + ++ I   R      SS +R+ +++    L    ++          
Sbjct: 147 QIADP----AIKASILKQITSARNQYATASSDVRSTIANFNNGLASASDVV-------GS 195

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L+  +R   ++ + + +   +   M   I            + +   S          + 
Sbjct: 196 LSGAQRTQTQAAVAIAQKTVDSLTMKASIAGDIS-----LRSGVGGASASGVDVSSLLSQ 250

Query: 276 EMSKLTILEKTREQKTILSPIAGTIV---YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               L  L          +   G       +   +  +       L+ I   S    + A
Sbjct: 251 LGGNLGSLAGAAGGSLGSAASGGGSTDPSDDTVITQGSPVDSGAALLVIT-DSSTLTLTA 309

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +V    I  +  G TA V+     D      +A +  ID   SQ  ++ +    Y V L 
Sbjct: 310 QVDETSILQITPGITADVQLDAVPDADY---QASVISID---SQGQSSSRGGVTYRVRLS 363

Query: 393 ITDLAFSDNNIE--LRNGFPAEVLFT 416
           +      D +     R G  A     
Sbjct: 364 LGAGKLGDGSAAPVPRPGMSAVADLQ 389


>gi|301017568|ref|ZP_07182242.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 69-1]
 gi|300400062|gb|EFJ83600.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 69-1]
          Length = 342

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/408 (12%), Positives = 126/408 (30%), Gaps = 99/408 (24%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQVENG 75
           + + G++  I W           S+G  +          N+  + S  SG I   +V + 
Sbjct: 16  IILAGVVFFIWW----------VSTGRFIQTTDDAYIGGNITTVASKVSGYISAIEVRDN 65

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +L  +D +    +   +  IK+ + ++++ ++ +     +  +++ A E+ +
Sbjct: 66  QSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLESIQATIAM---QQSIIQSASETWQ 122

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
               +   +   T         +++ + +         I   R D +             
Sbjct: 123 AVKHEEQKRLRDTERYEKFAQSAAISQQI---------IDNARFDYQQ------------ 161

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                               +  +ER      L  ++ +        ++    +E     
Sbjct: 162 --------------------VAAKERKAANDFLVEKQRLAVLSAQEENVRASIEEVQAAL 201

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L +                          E   + +PI G +    + +  ++ +  
Sbjct: 202 TQALLD-------------------------LEYTLVRAPIDGIVANRSAHT-GSWVEGG 235

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             L+ +VP S+  ++ A     QI  +K G  A +R      ++ + F   IE + P   
Sbjct: 236 TSLVSLVPVSE-LWVDANYKENQIAGMKPGMKAEIRA---DILKGEVFHGHIESLSPATG 291

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   +      T+    V ++I      +    LR G    V  
Sbjct: 292 ASFSLIPIENATGNFTKIVQRVPVRIAFDDAKELKQLLRPGLSVTVSV 339


>gi|282857038|ref|ZP_06266289.1| periplasmic component of efflux system [Pyramidobacter piscolens
           W5455]
 gi|282585199|gb|EFB90516.1| periplasmic component of efflux system [Pyramidobacter piscolens
           W5455]
          Length = 391

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 56/300 (18%), Positives = 103/300 (34%), Gaps = 21/300 (7%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E+  +S +      +    S  S +   G  S   ++ +      +I    +D  +K S 
Sbjct: 25  ERRADSADVSYRTAVAARGSLRSVIQATGTLSAEETVDVGTQISGTINDIYVDYNDKVSQ 84

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            + +     +      ++ + N +S + DL + +  + K+  +L+      K  L   +E
Sbjct: 85  GQLIAVMDNRTQQAEVDMAKANVLSAKADLAKAQASLLKANRDLKRTRELIKKDLIARSE 144

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +   +        + D+   Q   A   + L   E +     I SP+ G +V     
Sbjct: 145 LDADVAAQ-----STANADVMAAQAKVAQYEATLRKAEISLGYTKIYSPVDGVVVAKNVE 199

Query: 307 SSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                A   Q   + +I    K   +   V    I  VK G  A      YAD      K
Sbjct: 200 KGQTVAASYQTPSIAEIARDLKQMQVEVNVDEADIGSVKVGQDAEFTVDAYADTTFSG-K 258

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLA 423
               +I P  S    +      Y VI+K+     +++  +L  G  A V L   +   + 
Sbjct: 259 VTQVRISPSTSDNVVS------YTVIVKV-----ANDEEKLMPGMTANVSLVVTEKKDVL 307



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 54/133 (40%), Gaps = 5/133 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +   + ++G +  E+ V ++ +  SG I    V+   ++ QG  +   ++     
Sbjct: 40  AARGSLRSVIQATGTLSAEETV-DVGTQISGTINDIYVDYNDKVSQGQLIAVMDNRTQQA 98

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +D+ K ++ + +  +   +++L      L    ++++K   +R E   D   +  +   
Sbjct: 99  EVDMAKANVLSAKADLAKAQASLLKANRDLKRTRELIKKDLIARSELDADVAAQSTANAD 158

Query: 151 KVFNYGISSVYRS 163
            +      + Y +
Sbjct: 159 VMAAQAKVAQYEA 171


>gi|158335721|ref|YP_001516893.1| DevB-like secretion protein [Acaryochloris marina MBIC11017]
 gi|158305962|gb|ABW27579.1| DevB-like secretion protein, putative [Acaryochloris marina
           MBIC11017]
          Length = 394

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/393 (12%), Positives = 119/393 (30%), Gaps = 64/393 (16%)

Query: 44  VSSSGEILNEDNVVE--IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT-DLIDLKK 100
           V + G+I+ E +V++  + +     + +  V+ G ++     + T +  +     +   +
Sbjct: 48  VVARGKIIPEFDVIKLSVSNAEDSRVNRILVKVGDRVRANQVIATLQGADRRLADLKAAQ 107

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            ++K L+  +   K                                       +     +
Sbjct: 108 TNVKLLQARLIKAKQG-------------------------------------DAKPGGI 130

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                + +     + +     E +    +A L          + LF++ A+S+ +++   
Sbjct: 131 AAQQAVVIRLETQLPVEIKQKEAEIVSAQASLREAALTYQRRQQLFQQGAISRAEVDTAR 190

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                +   L   I   +  +  +     EA    A   +    D+   Q        ++
Sbjct: 191 EEFETTHATLATQIASLEQTVTTLKAQIQEAKARLAELQQVRPIDVTIAQAELERAFIEV 250

Query: 281 TILEKTREQKTILSPIAGTI------VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                      + +PI G I      V  Q  +        +         +  +++A+V
Sbjct: 251 EQRRADYNDTQVRAPIPGQILRINTKVGEQVNTQLGIVDLGRT--------EQMFVQAEV 302

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE----KIDPIISQQDNNLQTQEYYEVI 390
               +  V+KG  AT+    Y    E + + +++    +IDP      NN  T +     
Sbjct: 303 YETDVSKVQKGQRATI-LSEYGGF-EGEIQGVVDDVGLQIDPRTLSTGNNNPTTDE-NAR 359

Query: 391 LKITDLAFSDNNIELRNG---FPAEVLFTAKNT 420
           +    +    ++  +  G       V    +  
Sbjct: 360 VVNVSIRIDPDDSPIVAGLTNMQVRVTIDLQEK 392


>gi|70733764|ref|YP_257404.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
 gi|68348063|gb|AAY95669.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
          Length = 395

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 56/429 (13%), Positives = 133/429 (31%), Gaps = 78/429 (18%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K  KR+    +     L+++ +   + W ++ P   S  ++ +     +   +     G+
Sbjct: 20  KPRKRSKRPLIAGAIALTLVAVG--VGWVLMAP---STQATDDAYIAADATSVAPRVHGL 74

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V++   +  G PL+     E    + L +  + + +  +   ++AL         
Sbjct: 75  VTEVLVKDHQNVTAGQPLVRINSEEFDSRVSLAEGDLADNQAQVALAEAALT-------- 126

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                   ++ +  + +   S++      +     R   +    
Sbjct: 127 ------------------IQDAEQRLASARVQAARTSIRTNQAESKRAGAERNRFD---- 164

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                             L    AV++N++ +            +    EQ         
Sbjct: 165 -----------------TLVTTGAVARNEVEKY---------STQAISAEQGLAYAQAML 198

Query: 247 LYDEANLEFANYLKEISRDLEQ-NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              E +L      ++  +   Q  +       ++L + ++     TI +P+ GT+  N+ 
Sbjct: 199 QVAENDLAVTTAQRQRLQAQLQMAKAKVVTAKARLELAQQDLRHTTIYAPMDGTV-GNRQ 257

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
               +Y Q    L+ +VP     Y+ A     Q QH+  G +  ++      +       
Sbjct: 258 IQVGDYVQPGSRLLTLVPLHD-LYVLANFKETQTQHMYPGQSTQIKIDALPGV---SITG 313

Query: 366 IIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +E + P        +  +      T+    V ++I   A       LR G         
Sbjct: 314 TVESLAPGSGSTFALLPFEPGTGNFTKIVQRVPVRIRFDANQSGLERLRPGLSVTAKVDL 373

Query: 418 ---KNTTLA 423
              ++ T+A
Sbjct: 374 DDPQDRTVA 382


>gi|209550576|ref|YP_002282493.1| hypothetical protein Rleg2_3000 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209536332|gb|ACI56267.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 337

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 100/357 (28%), Gaps = 92/357 (25%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V+ G  +  GT L   +       +   + +   LR  +D  K+        
Sbjct: 56  SGRLSELGVDEGDVVKSGTVLAKLDAAPYEFAVRSGEANAAALRATLDKLKAG------- 108

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                     R  ++      Y  + + + N  ++                         
Sbjct: 109 ---------PRPTEIAQARAAYDESLADLENANLA------------------------- 134

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                              + L  +  +S+  L                   +Q    R 
Sbjct: 135 ---------------YDRARQLRPQGTISEATL-------------------DQATAARA 160

Query: 244 INELYDEANLEFANYLKEISR--DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           +     E+  E    L+E SR  D+           + L     +     + +P  G I+
Sbjct: 161 MAAARSESANEALKLLQEGSRIEDIAAADAQVKAAEATLASARTSLADTELRAPNDGVIL 220

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +   +      +  +  ++  ++   +R+ V    +  +  G   +V          K
Sbjct: 221 S-RVRENGAIVSPADTVF-VLSLTEPVSVRSYVAEPDLGRIHPGMKVSV---ASDTAPNK 275

Query: 362 KFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            ++  I  I P+      S +   L+T   Y + + I          +LR G P  V
Sbjct: 276 PYEGTIGFISPVAEFTPKSVETPELRTDLVYRLRIVID-----KPGADLRQGMPVTV 327


>gi|307823688|ref|ZP_07653916.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
 gi|307734982|gb|EFO05831.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
          Length = 395

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 66/427 (15%), Positives = 130/427 (30%), Gaps = 73/427 (17%)

Query: 5   MWKNLKRNHPASLKRMTLL-----SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEI 59
           M  +   NH  + KR  +L     ++I +  L+T +++  I      + + +   N+V I
Sbjct: 1   MENSQTDNHAINFKRRMMLGRIIGTLIVLGALLTGALVWRINYQHPRTNDAMVRANIVGI 60

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
               SG I +  VE+   + QG  L   +       +   K  +      +  EK     
Sbjct: 61  APEVSGRIVELHVEDNQYVKQGDLLYVIDPRPYQAKLAQAKAEL------LVAEKD---- 110

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                                                + S   S       +  +   R 
Sbjct: 111 -------------------------------------VDSRRASSGSAELAIERLEHQRA 133

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             E + S + A        L  ++ L EK  V+ + L Q       S  EL +   ++ +
Sbjct: 134 AAEAEVSRIEAEDEYLHSYLERLEPLAEKQYVTADQLKQARSKYAASRAELADARAKELS 193

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               I+E   ++    +     +   +           + +   E   E  ++ +P    
Sbjct: 194 ARSAIDEAKSDSRRAVS-----LIAQVGNVNARIEAAKAVVAAAELDVEYCSVRAPFDAY 248

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +    +     YA+    +  +V   +  Y  A      +Q ++ G  A V    Y   R
Sbjct: 249 VTNLNTR-EGEYAKTGTQMFALV-DDRHWYAIANFKETYLQSIRPGQEADVFLIGYPGKR 306

Query: 360 EKKF-----------KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            +                 + + P + +  N +     + V ++I +    D    LR G
Sbjct: 307 YRGVVTGIGWANYPDNIKQQGVLPEVQRTLNWVILASRFPVRIEIHE---RDPEHPLRMG 363

Query: 409 FPAEVLF 415
             A V  
Sbjct: 364 MTAFVTV 370


>gi|217979559|ref|YP_002363706.1| secretion protein HlyD family protein [Methylocella silvestris BL2]
 gi|217504935|gb|ACK52344.1| secretion protein HlyD family protein [Methylocella silvestris BL2]
          Length = 380

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 55/418 (13%), Positives = 116/418 (27%), Gaps = 90/418 (21%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIKSP-FSGII 67
            +L  + +L  +   G   W            +G  L   +         + +P   G +
Sbjct: 23  RTLGVIVVLIALAAGGHFGWRWW--------VTGRFLESTDNAFLQADKVVAAPKVGGYV 74

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V +  ++  G  L   ++              ++ R  +   ++ LD      D +
Sbjct: 75  AEVLVSDNQRVQAGQILARIDE--------------RDYRIALLQSQADLDKARASIDGV 120

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
             A                                        +        + +   + 
Sbjct: 121 AAA----------------------------------------LIQQAAKIEEAKADIAT 140

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             A L    ++     +L +K A +    +Q    + +    L +         +  + L
Sbjct: 141 ATAALDFATEEERRYSSLLQKGAGTTQRSHQATSDLLQRQAALDKARASYDAAEKQTDAL 200

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                LE A        ++  +Q                 +  TI SPI G +V ++S  
Sbjct: 201 RS---LEAAARASLQRAEINLDQAKL------------NLDYTTIKSPIDG-VVGDRSVR 244

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFKAI 366
                Q    L+ IVP  +  Y+ A     Q+  + +G TA+     Y   +   +  + 
Sbjct: 245 KGQLVQPGSNLLTIVPMGEAIYLVANFKETQLGGMVEGQTASFTVDAYSGHVFHGRLDSF 304

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN----IELRNGFPAEVLFTAKNT 420
                   +       T  + +++ ++      D        LR G  AE     +  
Sbjct: 305 APGTGAQFALLPPENATGNFTKIVQRVPVKIVLDGGDPMISRLRPGLSAEATVDTRAR 362


>gi|307822598|ref|ZP_07652829.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
 gi|307736202|gb|EFO07048.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
          Length = 338

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 101/296 (34%), Gaps = 27/296 (9%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +     + + L+    + +          IS+    ++       S + +          
Sbjct: 61  DNQAVKQNDVLVTIDDRDYQARVIQAEANISAEVAHIERLRAMKTSQHAHIETAGANIVA 120

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           ++A     QKDL  + NL ++ + ++  L++ +    ++  ELR +          +  L
Sbjct: 121 VQARREQIQKDLQRVNNLIDRGSAARQSLDKVQSESKQAAAELRGSQASASAEHNQLATL 180

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E               + + +    +  ++LT+ +   E   + +P+ G I  N+   
Sbjct: 181 DIE---------------ITETEARLENAQAQLTLAKIDLEHTQVKAPVDGII-GNRGVQ 224

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                +    L  +V  +   ++ A     Q+QH++ G   TV+   Y D+   +    +
Sbjct: 225 LGQLVRPGVALASLV-QNSKIWVEANFKETQLQHMRLGQPVTVKVDAYPDL---ELTGKV 280

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE---LRNGFPAEVLFT 416
           +   P    +         T  + +++ ++      D+      LR G    V   
Sbjct: 281 DSFSPASGSEFSILPEENATGNFTKIVRRVPVKIVFDSAENIQLLRPGLSVAVKVK 336



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 84/255 (32%), Gaps = 15/255 (5%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + N+V I     G +    V +   + Q   L+T +D +    +   + +I     HI+ 
Sbjct: 40  QSNIVLISPRVQGYVTHIAVNDNQAVKQNDVLVTIDDRDYQARVIQAEANISAEVAHIER 99

Query: 113 EKSALDFLNNKYDVLEK---AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            ++     +   +       A ++R EQ+   L + ++          S+  +SL    +
Sbjct: 100 LRAMKTSQHAHIETAGANIVAVQARREQIQKDLQRVNN-----LIDRGSAARQSLDKVQS 154

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
             +         +  +S     L++   ++T  +   E NA +Q  L + +    +    
Sbjct: 155 ESKQAAAELRGSQASASAEHNQLATLDIEITETEARLE-NAQAQLTLAKIDLEHTQVKAP 213

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +   I  +   L  +            N    +  + ++ Q         +T+       
Sbjct: 214 VDGIIGNRGVQLGQLVRPGVALASLVQNSKIWVEANFKETQLQHMRLGQPVTVKVDAYPD 273

Query: 290 KTIL------SPIAG 298
             +       SP +G
Sbjct: 274 LELTGKVDSFSPASG 288


>gi|253989677|ref|YP_003041033.1| membrane Secretion protein HlyD [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781127|emb|CAQ84289.1| membrane Secretion protein HlyD [Photorhabdus asymbiotica]
          Length = 411

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 119/316 (37%), Gaps = 44/316 (13%)

Query: 121 NNKYDVLEKAFESREEQLLDFLGK---YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + + + +   FE+  +Q+L   G+      T   +    +    R  ++++ +  S+   
Sbjct: 56  SGRLETIPAPFEAIIKQVLVKEGQWVKEGQTLVTLDTRKLDIELRQAQVEMIKASSVVDQ 115

Query: 178 RLDLENKSSLLRALLS---------SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             D EN   ++RA  S           + +L   + LF +  V + ++   E+ + +   
Sbjct: 116 LHDWENSQEVIRARRSVENANHMVMELKNNLAKTQALFSRGIVPKMEVETLEQQLRRQLT 175

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           EL       ++ L  I +    +N+  A                  +  S+   L++   
Sbjct: 176 EL----ASVQDDLTSIRQKGSASNVHVAEM-------------ELQNATSRYQALQEQYS 218

Query: 289 QKTILSPIAGTI--------VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            K I +P +G +            +  +     +  PL++I+  +    + A+V    + 
Sbjct: 219 HKEIKAPFSGVVLRAAQGESKKLLTIQTGVRVTEGMPLLEIM-DTTQYQVLAQVEETDLA 277

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            +K+G    +    ++D+        IE I  + S   +   +  YY+V++K+T  +  +
Sbjct: 278 KLKEGQVVKISGEGFSDL---PLDGEIETI-AMQSVSTDKPGSAIYYDVVIKVT--SSMN 331

Query: 401 NNIELRNGFPAEVLFT 416
               +R G  A+V   
Sbjct: 332 QGYPIRPGMSAKVNIV 347


>gi|15604113|ref|NP_220628.1| multidrug resistance protein A (emrA) [Rickettsia prowazekii str.
           Madrid E]
 gi|3860805|emb|CAA14705.1| MULTIDRUG RESISTANCE PROTEIN A (emrA) [Rickettsia prowazekii]
          Length = 350

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 58/421 (13%), Positives = 131/421 (31%), Gaps = 90/421 (21%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           K  H + +K + ++ +I           W+     + +         + ++  I +  SG
Sbjct: 11  KYKHYSFIKHVIIIVLIIFTYFGYRIYVWANTQSTDNAYI-------DADISNISAEVSG 63

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++ K  V N +++ +G  +   +D              ++ +  +               
Sbjct: 64  VLTKLFVTNNTRVNKGELIGEIDD--------------RDYKARLAA------------- 96

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                                       +  I +  +++++   ++    +    +  K 
Sbjct: 97  ---------------------------LDAAIQACIKNIEIIEQKISIGKMRLEQVAEKL 129

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            L +        D T ++ L     VS   L+  +    K   E ++           ++
Sbjct: 130 KLTKISFDIISIDFTRVQALSNAKFVSSKTLDDSKNEYQKVKTEYKQ---------AQLD 180

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               + NL+     K         Q    +      I  ++ +   I++ + G I  N +
Sbjct: 181 LDISKHNLQLLELEK------SAAQEKLKELTENKKITLRSLQNTKIIAMVPG-IFSNSN 233

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +  NY    + L  IV      YI+A     QI++ K G    + F  +     K    
Sbjct: 234 LAVGNYIVMGKALFSIV-QDNTMYIKANFKETQIKNFKSGMKVKIVFDAFP---TKVIYG 289

Query: 366 IIEKIDPIISQQ----DNNLQTQEYYEVILKITD-LAFSDNNIELRNGFPAEVLFTAKNT 420
            I  I P    +      +  T  + +++ +++  + F   N  L  G  A V      +
Sbjct: 290 KIRNIAPATGAKFSLIPPDNATGNFTKIVQRVSVLIDFVSPNANLVPGMSARVSIRTDQS 349

Query: 421 T 421
           T
Sbjct: 350 T 350


>gi|325168324|ref|YP_004280114.1| secretion protein HlyD [Agrobacterium sp. H13-3]
 gi|325064047|gb|ADY67736.1| secretion protein HlyD family protein [Agrobacterium sp. H13-3]
          Length = 364

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/364 (13%), Positives = 106/364 (29%), Gaps = 83/364 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V +  ++ +G  L   +  +     D     ++     I              
Sbjct: 73  GYISEVAVRDNQRVTKGQVLARIDSKDYRTAYDAAAADVRASSATIA------------- 119

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   + E Q++    +     + V     +  +  ++ K  R   +  +R   E +
Sbjct: 120 --------NIEAQIVAQQARIEEAEADVLASEATLAFARVEHK--RYEQLADSRAGTEQR 169

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +    A                         L + E    +S   +   I ++K +    
Sbjct: 170 AEEAAA------------------------RLRESEAAFSRSQATVAAAIGQKKVLETQ- 204

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               ++A LE A      +    ++                     TIL+PI G I  ++
Sbjct: 205 -RGIEQARLERARAALTAAASALED--------------------TTILAPIDGII-GSR 242

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +       Q    LM +VP     Y+ A     Q+ +V+ G  A V    +         
Sbjct: 243 TARVGQMVQPGNALMAVVP--DAIYVVANFKETQLTNVRGGEPAEVTVDAFPGR---VLS 297

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKITDL----AFSDNNIELRNGFPAEVLFT 416
             ++ + P    +     ++  T  + +++ ++         +D    LR G   E    
Sbjct: 298 GHLDSMSPATGLEFSLLPSDNATGNFTKIVQRVPGKIVIDDLADLKELLRPGMSVEAEIM 357

Query: 417 AKNT 420
               
Sbjct: 358 TTPR 361


>gi|281178529|dbj|BAI54859.1| putative secretion protein [Escherichia coli SE15]
          Length = 342

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 53/408 (12%), Positives = 120/408 (29%), Gaps = 99/408 (24%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQVENG 75
           + + G++  I W           S G  +          N+  + S  SG I   +V + 
Sbjct: 16  ILLAGVVFFIWW----------VSKGRFIQTTDDAYIGGNITTVTSKVSGYISAIEVRDN 65

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +L  +D +    +   +  IK+ + ++++ ++ +                  
Sbjct: 66  QSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLESIQATIAM---------------- 109

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                  S+ +S       ++     RL    +   L    +  
Sbjct: 110 ---------------------QQSIIQSASETWQAVKHEEQKRLRDTERYEKLAQSAAIS 148

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+ +   +            +  +ER      L  ++ +        ++    +E     
Sbjct: 149 QQIIDNAR-------FDYQQVAAKERKAANDFLVEKQRLAVLSAQEENVRASIEEVQAAL 201

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L +                          E   + +PI G +    + +  ++ +  
Sbjct: 202 TQALLD-------------------------LEYTLVRAPIDGIVANRSAHT-GSWVEGG 235

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             L+ +VP S+  ++ A     QI  +K G  A +R      ++ + F   IE + P   
Sbjct: 236 TSLVSLVPVSE-LWVDANYKENQIAGMKPGMKAEIRA---DILKGEVFHGHIESLSPATG 291

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   +      T+    V ++I      +    LR G    V  
Sbjct: 292 ASFSLIPIENATGNFTKIVQRVPVRIAFDDAKELKQLLRPGLSVTVSV 339


>gi|209522895|ref|ZP_03271452.1| efflux transporter, RND family, MFP subunit [Arthrospira maxima
           CS-328]
 gi|209496482|gb|EDZ96780.1| efflux transporter, RND family, MFP subunit [Arthrospira maxima
           CS-328]
          Length = 515

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/347 (8%), Positives = 106/347 (30%), Gaps = 29/347 (8%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I+   SG++K+  V  G Q+  G P++  +  +     +    +++  +  +   ++ L
Sbjct: 65  IIRPRVSGLVKEVYVRLGDQVTVGDPIIQIDGSQQLANFEGTIATVQARQAQLSGAEAEL 124

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + L             + +       +            +    ++ +  L   R     
Sbjct: 125 EALRANLTRTRAELSFQSQGANLQRSERELEAQIEEQERLEFELQNAQDNLEGSRRELDR 184

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA----VSQNDLNQQERIVYKSTLELRE- 232
           R  +  +            ++  +   L+++       S+ ++  QE+ V  +T  ++  
Sbjct: 185 REAVRQQRQATYERYERLWQEGVVSSELYDEKLRDRQTSEAEVANQEQQVLAATARVQSA 244

Query: 233 --NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL---------- 280
             N+  Q   +       + +  +    +  +   +   ++    + +++          
Sbjct: 245 RMNLSRQGRTIEAARASVESSRRDLERQIATLEAQIASQEKAIEAQQAQIALIGREIQGA 304

Query: 281 ----TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                  +   +  ++++PI+G +      +  +       +  I   ++   +   +  
Sbjct: 305 RSGAVAQQVQLDYYSVVAPISGIVSNVPIKA-GDLVDSQTTVTTIR-QNQNLEVNINIPI 362

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             +  ++ G    +           +       I  I     +  QT
Sbjct: 363 SLLPQLRVGIPVQLI-----SQETGEVIGT-TSISYIAPDAGSGTQT 403


>gi|215486634|ref|YP_002329065.1| predicted multidrug resistance efflux pump, HlyD family
           [Escherichia coli O127:H6 str. E2348/69]
 gi|215264706|emb|CAS09078.1| predicted multidrug resistance efflux pump, HlyD family
           [Escherichia coli O127:H6 str. E2348/69]
          Length = 343

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 53/408 (12%), Positives = 120/408 (29%), Gaps = 99/408 (24%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQVENG 75
           + + G++  I W           S G  +          N+  + S  SG I   +V + 
Sbjct: 17  IILAGVVFFIWW----------VSKGRFIQTTDDAYIGGNITTVASKVSGYISAIEVRDN 66

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +L  +D +    +   +  IK+ + ++++ ++ +                  
Sbjct: 67  QSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLESIQATIAM---------------- 110

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                  S+ +S       ++     RL    +   L    +  
Sbjct: 111 ---------------------QQSIIQSASETWQAVKHEEQKRLRDTERYEKLAQSAAIS 149

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+ +   +            +  +ER      L  ++ +        ++    +E     
Sbjct: 150 QQIIDNAR-------FDYQQVAAKERKAANDFLVEKQRLAVLSAQEENVRASIEEVQAAL 202

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L +                          E   + +PI G +    + +  ++ +  
Sbjct: 203 TQALLD-------------------------LEYTLVRAPIDGIVANRSAHT-GSWVEGG 236

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             L+ +VP S+  ++ A     QI  +K G  A +R      ++ + F   IE + P   
Sbjct: 237 TSLVSLVPVSE-LWVDANYKENQIAGMKPGMKAEIRA---DILKGEVFHGHIESLSPATG 292

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   +      T+    V ++I      +    LR G    V  
Sbjct: 293 ASFSLIPIENATGNFTKIVQRVPVRIAFDDAKELKQLLRPGLSVTVSV 340


>gi|153212710|ref|ZP_01948367.1| multidrug resistance protein VceA [Vibrio cholerae 1587]
 gi|124116360|gb|EAY35180.1| multidrug resistance protein VceA [Vibrio cholerae 1587]
          Length = 395

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 51/378 (13%), Positives = 102/378 (26%), Gaps = 63/378 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E+     GII +  V +   + QG  L+  +D +        ++++      +   K  +
Sbjct: 62  EVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTDA-------RLALLQAEADLALAKRRV 114

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                  + L    E++E        +  +  +      I                    
Sbjct: 115 RSYLANDEGLSAMVEAQEANEQRVKAQLKAAQADFERAKI-------------------- 154

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
                               DL+  ++L    +VS  +L   +    ++   L       
Sbjct: 155 --------------------DLSRREDLVRSGSVSGEELTNAKTGFEQAQANLNAAKAAM 194

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                             A            +        ++    +   E+  I +PI+
Sbjct: 195 AQAQATKLSTIGSQKANAALTDNTTV----DSNPEVLLAKARYEQAKIDLERTVIRAPIS 250

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q        Q   PLM +VP     Y+ A     +++ VK G   T+    Y D
Sbjct: 251 GIVAKRQV-QVGRRVQVGMPLMTVVPTDH-IYVDANFKEVELRDVKVGQPVTLTADLYGD 308

Query: 358 IRE--KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN---G--F 409
                              S       T  + +V+ ++   +     +++      G   
Sbjct: 309 DVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSM 368

Query: 410 PAEVLF--TAKNTTLAQE 425
            A +    T    TL Q 
Sbjct: 369 VATIDTAGTTDPQTLVQY 386


>gi|94497881|ref|ZP_01304446.1| putative aromatic efflux pump membrane protein [Sphingomonas sp.
           SKA58]
 gi|94422609|gb|EAT07645.1| putative aromatic efflux pump membrane protein [Sphingomonas sp.
           SKA58]
          Length = 388

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 82/299 (27%), Gaps = 53/299 (17%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           ++            V +   + +G  L+  +       +   +  +   R       +  
Sbjct: 74  QVTPLIGAQAIDVLVSDTQSVKKGDILVKLDPTNAKIAVAQAEADLAEARRRFRQTDATS 133

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D L                                                 ++++   +
Sbjct: 134 DSLA-----------------------------------------------AQVQARSAD 146

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            +    + +  +A L   + DL   + L    AVS +++   +     +   LR      
Sbjct: 147 IVQARAQLATAQADLEKARVDLQRREALVADGAVSGDEVTAAQTAYASAQAALRLAQAGV 206

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           K           +     A     +    E          ++L   +   E+ TI +PI 
Sbjct: 207 KTAQATRGAATGQLEANQAL----VRGSTEDTDPAVLAAKARLESAKLDLERTTIRAPID 262

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           G +   Q         Q  P+M IVP     Y+ A    KQ++ V+ G  A V    Y 
Sbjct: 263 GVVTKRQV-QVGQRVAQGSPIMSIVPI-SQVYVDANFKEKQLRGVRIGMPAKVTSDLYG 319


>gi|254417200|ref|ZP_05030945.1| auxiliary transport protein, MFP family, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196176006|gb|EDX71025.1| auxiliary transport protein, MFP family, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 478

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/401 (11%), Positives = 121/401 (30%), Gaps = 57/401 (14%)

Query: 49  EILNEDNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            I     V  I+        SG + K +VE G ++  G  +   E  +        +  +
Sbjct: 54  RITANGTVQPIQTVNLSPKTSGRLVKLEVEQGDRVDAGDVVAVMEQEDVKARFLAVRADL 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           K  +  +   K+                  R E++     + +   ++     +      
Sbjct: 114 KQAQARLAEAKAG----------------PRPEEIKQAEQRLYQAKAR-LAEALVGNPSE 156

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +   + ++++          +    + L+          + +F +   ++  L++ ++ +
Sbjct: 157 INQAIAQVQTASSRFDLARVRFRRYKYLVEEGVVSQDQFQEVFAEARTAKAQLDEAQQRL 216

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTI 282
            +          E    +  +N    EA       +K     ++ Q +       ++   
Sbjct: 217 EQVR---ETKNTETSPEIFQLNAAVKEAEFALQQLVKGTRKEEIAQFEAAVEAAKAQTQA 273

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYA--------QQSQPLMKIVP-HSKLTYIRAK 333
                +   I +P  G I   +  +   +           S     IV   +K   + A+
Sbjct: 274 AYIQLQDTIIRAPFPGIITQ-KYATVGAFVTPTTSASSTASATSTSIVALATKQLEVLAE 332

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    I  +++     V    + D     F+  +  + P    Q++       ++V + +
Sbjct: 333 VPEVDIGQIQEKQPVQVISDAFPDQ---AFRGQVRLVAPEAVVQNDVTS----FQVRVAL 385

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
              A      +LR+G   +             +  PI+D  
Sbjct: 386 APEA----QEKLRSGMNVD----------LTFLGKPISDAL 412


>gi|241258626|ref|YP_002978510.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240863096|gb|ACS60759.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 394

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 53/379 (13%), Positives = 105/379 (27%), Gaps = 83/379 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +   I    SG + +  V +   +  G PL   +D +                    
Sbjct: 90  VKADNSTIAPKVSGYLAEVLVMDNETVKAGQPLARIDDRDF------------------- 130

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             K+ALD  +      E    +++  L        +  + V     +  +     K    
Sbjct: 131 --KAALDQASADVAAAEATVNAKQASLDIQQSTIAAARATVDVDRANETFAEQNNKRYS- 187

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                                           NL            Q    +  +   + 
Sbjct: 188 --------------------------------NLATSGYAPVQTAQQAASQIAAAQASIV 215

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +       ++ ++ L               + +L Q +   A   +     E      T
Sbjct: 216 RDTASLDAAVKQVDLL---------------NAELAQAKAALARSQAVQHQAELNLSYAT 260

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P+ GT+  N++     Y Q    LM +VP +    I A     Q+  VK G    + 
Sbjct: 261 ITAPVDGTV-GNRTLRVGQYVQAGTQLMSVVPTTAAYVI-ANYKETQLTDVKAGQPVDIE 318

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDN----NI 403
              +           ++ + P   Q+      +  T  + +V+ +I      D     N 
Sbjct: 319 VDMFPGRTY---HGHVDSLAPASGQEFALLPPDNATGNFTKVVQRIPVKIVLDGDAAANG 375

Query: 404 ELRNGFPAEVLFTAK-NTT 421
           +LR G   +     K + +
Sbjct: 376 DLRPGMSVQPDINTKNDRS 394


>gi|166365858|ref|YP_001658131.1| ABC-transporter membrane fusion protein [Microcystis aeruginosa
           NIES-843]
 gi|166088231|dbj|BAG02939.1| ABC-transporter membrane fusion protein [Microcystis aeruginosa
           NIES-843]
          Length = 492

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/388 (12%), Positives = 125/388 (32%), Gaps = 33/388 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + + +SG +    +V  I     G + +  V+ G  + +G  L   +++E        
Sbjct: 56  LAVEIKASGRVEPIQSV-NISPKNPGRLVRLLVDQGMIVKKGQTLAVMDNLEVYARGMQS 114

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  ++    +++  K ++     +        ++  +QL   L +      K  +   + 
Sbjct: 115 EAHLREALANLEQAKRSIPEDIRQLQARFYQAQASYKQLEARLAQAKERIPKDLDQLQAQ 174

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V  +          +  N   +   +       +   + L    NL E        + + 
Sbjct: 175 VQAAQSRFRLAENRVKRNENLVREGAIAQDQFDAVLNEYLNAKANLDES-------IRRL 227

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E+    ++ E+       +  +        EA        K    +L + + + A   + 
Sbjct: 228 EQADKTASPEVAG----IEQEMIGAAAAIAEAKFALEQRQKTQETELARLESSVAAARAD 283

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYA--------QQSQPLMKIVPHSKLTYIR 331
           L  ++       I +P  G +   +  +  ++           S     I+  +    + 
Sbjct: 284 LEQIKIQYRDTVITAPFDGIVTQ-KYATEGSFVTPTTSASSTASATSTSIIALASGLEVI 342

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           AKV    +  +++G    +    +    E+ F+  +  + P    +DN       +EV +
Sbjct: 343 AKVPEVDVGLLQRGQPVRIVADAFP---EEVFEGRVILVAPEAIIEDNVTS----FEVRI 395

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
                       +L++    +V F  + 
Sbjct: 396 -----GLVTGRDKLKSKMNVDVTFVGQQ 418


>gi|168186785|ref|ZP_02621420.1| putative HlyD family secretion protein [Clostridium botulinum C
           str. Eklund]
 gi|169295313|gb|EDS77446.1| putative HlyD family secretion protein [Clostridium botulinum C
           str. Eklund]
          Length = 487

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/380 (12%), Positives = 113/380 (29%), Gaps = 57/380 (15%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +   + G  +  G  L   +  +          ++   R  ++     +   N + 
Sbjct: 69  GKISQLNAKEGDYVSAGQALGQLDTKDYN-------FAVNGARGQLEAANGQVSAANGQS 121

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +      E+ + Q+     +     +KV      +        +   +   +NR  L  K
Sbjct: 122 EAAGGQAEAAKGQMQAAQKQISMAQAKV-----DASKAQYDKAVNGAQVEDINRAKLAVK 176

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLELRENI-------- 234
           ++         +K    ++ L+++  VS+  L   + +R   K  L+ +  I        
Sbjct: 177 NA--EDTYEYAEKSYGRIEKLYKEGIVSKQQLDDIKIKRDSAKVDLDNKREILNKAENGA 234

Query: 235 --HEQKNMLRHINELYDEANLEFANY---LKEISRDLEQNQRT----------FADEMSK 279
              +++  L   N    +     A Y     + +  L Q                   ++
Sbjct: 235 REEDKRAALAGYNAAKAQLEAAKAQYSAAQGQYNAALGQKNAAQGQSAAAQGMRESAQTQ 294

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
               +   +   + + ++G +V      +        P++ I   +    I   V    I
Sbjct: 295 YESKQSMLDDTVLRASVSGYVVKVL-NKAGENVAAGYPVVVI--RTDDQVIDIGVAQNDI 351

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           + +K G    +      DI+       I +I+ +   +         Y+  +++      
Sbjct: 352 EKIKVGTKTDI---AINDIKT---TGSIVEIEQVPDPKSRT------YKAKVRMDKQVPK 399

Query: 400 DNNIELRNGFPAEVLFTAKN 419
           D       G  A V      
Sbjct: 400 DK---FYVGTVANVSIKLAE 416


>gi|149921061|ref|ZP_01909520.1| HlyD family secretion protein [Plesiocystis pacifica SIR-1]
 gi|149818065|gb|EDM77522.1| HlyD family secretion protein [Plesiocystis pacifica SIR-1]
          Length = 397

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 97/324 (29%), Gaps = 47/324 (14%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
            +  +    EI +  +G +   +V  G ++  G  L+  +D ET   ++  +  +++L  
Sbjct: 53  RVQVDAVSREIAASRAGRVSSVRVSIGDRVEAGDLLIELDDRETALALERAEARLESLDA 112

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
                                                      V       V  S +   
Sbjct: 113 -------------------------------------------VIVQREREVAASREALE 129

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               +    RL+   +     A     + +L   + L + +  +  +L + E    +   
Sbjct: 130 ALELAAGAARLEARARVDAALAQARLAESELEDTRGLEQSDVATAAELRRSEAEAERQRA 189

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           + RE            +    +          E++          AD   ++  LE   E
Sbjct: 190 QARERRSASSFARLDGDRQVRDRLARIVAIEGEVAVLAVDR----ADAQGRIAALEIELE 245

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           Q  + +P+AGT+    +     +  + + L  +VP  +L  +      + +  +K G  A
Sbjct: 246 QHRLRAPVAGTVGELAAIERGAWVDRGERLGAVVPAGELEVVAEFSPSQAVGRIKAGQPA 305

Query: 349 TVRFPHYADIREKKFKAIIEKIDP 372
            +R   +         A +  +  
Sbjct: 306 RLRLAGFPWAEYGSVGAQVSAVAR 329


>gi|118443568|ref|YP_877629.1| HlyD family secretion protein [Clostridium novyi NT]
 gi|118134024|gb|ABK61068.1| HlyD family secretion protein, putative [Clostridium novyi NT]
          Length = 487

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/362 (11%), Positives = 109/362 (30%), Gaps = 54/362 (14%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V+ G  +  G  L   +  +          ++   R  ++     +   N + 
Sbjct: 69  GKIAQLNVKEGDYVSAGEALGQLDTKDYN-------FAVNGARGQLEAANGQVSAANGQA 121

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +      E+ + Q+     +     +KV      +        L   ++  +NR  L  K
Sbjct: 122 EAAGGQAEAAKGQMQAAQKQIAMAQAKV-----DASKAQYDKALNGAQAEDINRARLAVK 176

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL---------------NQQERIVYKSTLE 229
           ++         +K    ++ L+++  VS+  L               N++E +       
Sbjct: 177 NA--EDTYEYAEKSYGRIEKLYKEGIVSKQQLDDIKIKRDSAKVDLDNKKELLAKAENGA 234

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT----------FADEMSK 279
             E+               + A  +++    + +  L Q                   ++
Sbjct: 235 REEDKRAALAGYNAAKAQLEAAKSQYSAAQGQYNAALGQRNAAQGQSAAAQGMRESAQTQ 294

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
               +   +   + + ++G +V      +        P++ I   +    I   V    I
Sbjct: 295 YESKQSMLDDTVLRASVSGYVVKVL-NKAGENVAAGYPVVVI--RTDDQVIDIGVAQNDI 351

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           + +K G  A +      D++       I +I+ +   +         Y+  +++      
Sbjct: 352 EKIKVGAKADI---AINDLKT---TGSIAEIEQVPDPKSRT------YKAKIRMDKQLPK 399

Query: 400 DN 401
           D 
Sbjct: 400 DK 401


>gi|77458084|ref|YP_347589.1| secretion protein HlyD [Pseudomonas fluorescens Pf0-1]
 gi|77382087|gb|ABA73600.1| putative periplasmic protein [Pseudomonas fluorescens Pf0-1]
          Length = 390

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLP--------------IEISVSSSGEILNED 54
           +KR  PA    +  L +I +I +  W +L P              IE SV++ G +    
Sbjct: 1   MKRPRPARRALLIALCLIPVIAIAAWQVLPPGRDKFTTVQVSRGDIESSVTALGTLQPRR 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ +  SG I+K  VE G  + +G  L+  +       +D  + SI+NL+  +  ++
Sbjct: 61  YV-DVGAQASGQIRKIHVEVGDVVKEGQLLVEIDPATQKAKLDASQFSIENLKAQLQEQQ 119

Query: 115 SALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    KY     L     +REE +     +  +T +++  F   I     SL+    
Sbjct: 120 AQHELARQKYQRQQNLAAGGATREEDVQTARAELKATQARIDMFQAQIRQAQASLRSDQA 179

Query: 170 RM 171
            +
Sbjct: 180 EL 181



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 3/134 (2%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL    ++++  L       +E        LK     ++  Q      
Sbjct: 111 LKAQLQEQQAQHELARQKYQRQQNLAAGGATREEDVQTARAELKATQARIDMFQAQIRQA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   +       I +P+AGT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QASLRSDQAELGYTRIYAPMAGTVVALDAR-EGQTLNAQQQTPLILRIAKLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTA 348
           +   I HVK G +A
Sbjct: 230 SEADIGHVKPGMSA 243


>gi|167629197|ref|YP_001679696.1| hypothetical protein HM1_0880 [Heliobacterium modesticaldum Ice1]
 gi|167591937|gb|ABZ83685.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
          Length = 385

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/411 (12%), Positives = 119/411 (28%), Gaps = 32/411 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K+   A      LL+ IG      W+    +      +G +  E     + S  +G +++
Sbjct: 3   KKLTAAIAIGAVLLTAIGFTAF-PWASRSKVRAGQPLTGYV--EGVEFSVASKVAGRVQE 59

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V+ G ++  G  +   E  E  + ++  K ++   +         +D    +      
Sbjct: 60  VLVKEGDRVEAGQIIARLESRELVEQLNQAKAALAQAQIGHTLTADTVDGQVAQAKAALD 119

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A +++ + L           ++         Y + K+   R   ++ N      +    +
Sbjct: 120 AAQAKLDALKKGARPQEIEQARAAVDQAQVAYDNAKLNAERTEKLFANGAASAKQRDDAQ 179

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           +        L M K                      S +E      E       +     
Sbjct: 180 SAADVALATLKMAKE-------------------KLSLVEAGARPEEIDGAKAQV----- 215

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E               +           + +   +   +   I +P  G +      +  
Sbjct: 216 EQAAAALQLAIASRSQVSLKAAATDQAQAAVEAAQAMVDNTVIRAPQKGVVTAKLVQA-G 274

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  P++ +V      +++A V   ++  ++ G    V      +    K   +   
Sbjct: 275 EMVAAGLPIVTVV-DIDTVWVKANVPEDKVAQLQLGQEIEVSVEGIENRLTGKLTWVSAS 333

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            D    +  +++   E     +K+      + +  L+ G  A+V   A +T
Sbjct: 334 ADFATKKASHDMGDFERKTFGIKV---ELPNPDGVLKQGMTAKVYLPAGST 381


>gi|312966731|ref|ZP_07780949.1| hlyD family secretion family protein [Escherichia coli 2362-75]
 gi|312288195|gb|EFR16097.1| hlyD family secretion family protein [Escherichia coli 2362-75]
          Length = 342

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 53/408 (12%), Positives = 120/408 (29%), Gaps = 99/408 (24%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQVENG 75
           + + G++  I W           S G  +          N+  + S  SG I   +V + 
Sbjct: 16  IILAGVVFFIWW----------VSKGRFIQTTDDAYIGGNITTVASKVSGYISAIEVRDN 65

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +L  +D +    +   +  IK+ + ++++ ++ +                  
Sbjct: 66  QSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLESIQATIAM---------------- 109

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                  S+ +S       ++     RL    +   L    +  
Sbjct: 110 ---------------------QQSIIQSASETWQAVKHEEQKRLRDTERYEKLAQSAAIS 148

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+ +   +            +  +ER      L  ++ +        ++    +E     
Sbjct: 149 QQIIDNAR-------FDYQQVAAKERKAANDFLVEKQRLAVLSAQEENVRASIEEVQAAL 201

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L +                          E   + +PI G +    + +  ++ +  
Sbjct: 202 TQALLD-------------------------LEYTLVRAPIDGIVANRSAHT-GSWVEGG 235

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             L+ +VP S+  ++ A     QI  +K G  A +R      ++ + F   IE + P   
Sbjct: 236 TSLVSLVPVSE-LWVDANYKENQIAGMKPGMKAEIRA---DILKGEVFHGHIESLSPATG 291

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   +      T+    V ++I      +    LR G    V  
Sbjct: 292 ASFSLIPIENATGNFTKIVQRVPVRIAFDDAKELKQLLRPGLSVTVSV 339


>gi|284051232|ref|ZP_06381442.1| hypothetical protein AplaP_07142 [Arthrospira platensis str.
           Paraca]
          Length = 515

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/314 (8%), Positives = 101/314 (32%), Gaps = 23/314 (7%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I+   SG++K+  V  G Q+  G P++  +  +     +    +++  +  +   ++ L
Sbjct: 65  IIRPRVSGLVKEVYVRLGDQVTVGDPIIQIDGSQQLANFEGTIATVQARQAQLIGAEAQL 124

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + L             + +       +         +  +    ++ +  L   R     
Sbjct: 125 ESLRADLTRTRAELSFQSQGANLQRSERELEAQMEEHERLEFDLQNAQDNLEGARRELDR 184

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA----VSQNDLNQQERIVYKSTLELRE- 232
           R  +  +            ++  +  +L+++       S+ ++  QE+ V  +T  ++  
Sbjct: 185 REAVRQQRQATYERYERLWQEGVVSSDLYDEKLRDRQTSEAEVANQEQQVLAATARVQSA 244

Query: 233 --NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL---------- 280
             N+  Q   +       + +  +    +  +   +   ++    + +++          
Sbjct: 245 RMNLSRQGRTIEAARASVESSRRDLERQIATLEAQIASQEKAIEAQQAQIALIGREIQGA 304

Query: 281 ----TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                  +   +  ++++PI+G +         +       +  I   ++   +   +  
Sbjct: 305 RSGAVAQQVQLDYYSVVAPISGIVSNVPI-KVGDLVDSQTTVTTIR-QNQNLEVNINIPI 362

Query: 337 KQIQHVKKGYTATV 350
             +  ++ G    +
Sbjct: 363 SLLPQLRVGIPVQL 376


>gi|229591388|ref|YP_002873507.1| putative HlyD family secretion protein [Pseudomonas fluorescens
           SBW25]
 gi|229363254|emb|CAY50347.1| putative HlyD-family secretion protein [Pseudomonas fluorescens
           SBW25]
          Length = 383

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 63/423 (14%), Positives = 128/423 (30%), Gaps = 86/423 (20%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           ++L+    +SL    +  +  +I L  W  L P   +V ++   L    V  I    SG 
Sbjct: 32  RSLRVRIVSSLGFAAIAIVGVLIVLYAWQ-LPPFSSAVETTENALVRGQVTIIGPQLSGY 90

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V++   +  G  L+  +D        + K  +      +  +K++L  +  + + 
Sbjct: 91  VFDVPVQDFQYVKAGDLLVRLDD-------RIYKQRLDQALAQLAVQKASLANVVQQRNS 143

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E   + R+  L+D   +   + +                                    
Sbjct: 144 AEATIQLRQAALVDSQAQARKSTA------------------------------------ 167

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                      DL   + L    +VS+ +L                ++    N       
Sbjct: 168 -----------DLRRNEALISDGSVSKREL----------------DVTRAANAQTVAAV 200

Query: 247 LYDEANLEFA-NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              +A+LE A   L+ +  +    +   A   + + +         I++P  G +     
Sbjct: 201 AQAQASLEIARQDLQTVIVNRGSLEAAVASAEAAVELARIDLSNTRIIAPRDGQLGQIGV 260

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                Y      LM +VP  K  ++ A +   Q+ +V+ G   T         +   F  
Sbjct: 261 R-LGAYVNSGAQLMALVP--KQLWVIANMKETQMDNVQVGQPVTFTVDALNHRK---FHG 314

Query: 366 IIEKIDPIISQQ----DNNLQTQEYY----EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            ++ I P    +      +  T  +      V ++IT       +  LR G    V    
Sbjct: 315 TVQHISPATGSEFSLLQADNATGNFVKIAQRVPVRITVDPDQAESERLRPGLSVVVSIDT 374

Query: 418 KNT 420
              
Sbjct: 375 AGR 377


>gi|184158169|ref|YP_001846508.1| multidrug resistance efflux pump [Acinetobacter baumannii ACICU]
 gi|183209763|gb|ACC57161.1| Multidrug resistance efflux pump [Acinetobacter baumannii ACICU]
          Length = 353

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 100/310 (32%), Gaps = 34/310 (10%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           ++ L N   V++K          D+  +Y    S V     S    +L ++    +S   
Sbjct: 69  MELLINDNQVVKKGETLAVLDHRDYQARYDQARSVV-----SLKEAALGVQQQNEKSARS 123

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           + ++  +     +A L+  +K+    ++L +   +++ +    +     +  +L +    
Sbjct: 124 SIIEANSGVVAAQADLARLKKEFERYQDLLKDGVITRQNFEGIQSQYLTAQAQLSKAQAA 183

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                  +  L                    Q         + L + +       ++SP+
Sbjct: 184 VNAAEAQLGSLQ---------------ASRAQLLADIQSAHANLNLYQVDLASSKVVSPV 228

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G I         +       LM I+P +   Y++A     QI+ +  G    ++   Y 
Sbjct: 229 SGKIGSLAI-QKGSRVSPQTRLMAIIPENS-LYVQANFKETQIEKMHIGQKVKLKLDAYP 286

Query: 357 DIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE---LRNGF 409
            +    F   IE   P           +  T  + +V+ +I      D++     ++ G 
Sbjct: 287 SLN---FTGKIESFSPASGATFSLMPPDNATGNFNKVVQRIPVRIAIDSSPHIDLIKPGM 343

Query: 410 --PAEVLFTA 417
              A V    
Sbjct: 344 SVSATVDLRT 353



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/218 (10%), Positives = 66/218 (30%), Gaps = 8/218 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V  +    SG + +  + +   + +G  L   +  +     D  +  +      + 
Sbjct: 53  VQADVTWVMPKISGEVMELLINDNQVVKKGETLAVLDHRDYQARYDQARSVVSLKEAALG 112

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--------SKVFNYGISSVYRS 163
            ++       +          + +  L     ++            ++    GI S Y +
Sbjct: 113 VQQQNEKSARSSIIEANSGVVAAQADLARLKKEFERYQDLLKDGVITRQNFEGIQSQYLT 172

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            + +L++ ++               RA L +  +      NL++ +  S   ++     +
Sbjct: 173 AQAQLSKAQAAVNAAEAQLGSLQASRAQLLADIQSAHANLNLYQVDLASSKVVSPVSGKI 232

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
               ++    +  Q  ++  I E        F     E
Sbjct: 233 GSLAIQKGSRVSPQTRLMAIIPENSLYVQANFKETQIE 270


>gi|332872719|ref|ZP_08440686.1| efflux pump membrane protein [Acinetobacter baumannii 6014059]
 gi|322508488|gb|ADX03942.1| RND family drug transporter [Acinetobacter baumannii 1656-2]
 gi|323518109|gb|ADX92490.1| multidrug resistance efflux pump [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332739113|gb|EGJ69973.1| efflux pump membrane protein [Acinetobacter baumannii 6014059]
          Length = 355

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 100/310 (32%), Gaps = 34/310 (10%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           ++ L N   V++K          D+  +Y    S V     S    +L ++    +S   
Sbjct: 71  MELLINDNQVVKKGETLAVLDHRDYQARYDQARSVV-----SLKEAALGVQQQNEKSARS 125

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           + ++  +     +A L+  +K+    ++L +   +++ +    +     +  +L +    
Sbjct: 126 SIIEANSGVVAAQADLARLKKEFERYQDLLKDGVITRQNFEGIQSQYLTAQAQLSKAQAA 185

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                  +  L                    Q         + L + +       ++SP+
Sbjct: 186 VNAAEAQLGSLQ---------------ASRAQLLADIQSAHANLNLYQVDLASSKVVSPV 230

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G I         +       LM I+P +   Y++A     QI+ +  G    ++   Y 
Sbjct: 231 SGKIGSLAI-QKGSRVSPQTRLMAIIPENS-LYVQANFKETQIEKMHIGQKVKLKLDAYP 288

Query: 357 DIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE---LRNGF 409
            +    F   IE   P           +  T  + +V+ +I      D++     ++ G 
Sbjct: 289 SLN---FTGKIESFSPASGATFSLMPPDNATGNFNKVVQRIPVRIAIDSSPHIDLIKPGM 345

Query: 410 --PAEVLFTA 417
              A V    
Sbjct: 346 SVSATVDLRT 355



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/218 (10%), Positives = 66/218 (30%), Gaps = 8/218 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V  +    SG + +  + +   + +G  L   +  +     D  +  +      + 
Sbjct: 55  VQADVTWVMPKISGEVMELLINDNQVVKKGETLAVLDHRDYQARYDQARSVVSLKEAALG 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--------SKVFNYGISSVYRS 163
            ++       +          + +  L     ++            ++    GI S Y +
Sbjct: 115 VQQQNEKSARSSIIEANSGVVAAQADLARLKKEFERYQDLLKDGVITRQNFEGIQSQYLT 174

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            + +L++ ++               RA L +  +      NL++ +  S   ++     +
Sbjct: 175 AQAQLSKAQAAVNAAEAQLGSLQASRAQLLADIQSAHANLNLYQVDLASSKVVSPVSGKI 234

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
               ++    +  Q  ++  I E        F     E
Sbjct: 235 GSLAIQKGSRVSPQTRLMAIIPENSLYVQANFKETQIE 272


>gi|332305129|ref|YP_004432980.1| secretion protein HlyD family protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172458|gb|AEE21712.1| secretion protein HlyD family protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 360

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 92/307 (29%), Gaps = 14/307 (4%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E++   ++ +    +      R E L     ++      +     S     L      ++
Sbjct: 34  EETDNAYIKSDNVSIRAEITGRIETLAVQENQHVQQGQLLVRINASDYQAKLAQANAELK 93

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                 ++ + + +L    +   + ++   K   ++  ++       ++  + S  +L+ 
Sbjct: 94  VARAALVNTQQQITLQDKKIDEAKANIDAAKAEVKRGELNLARFQILDKQAFDSKQQLQN 153

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +       + +           Y   +    +          S++   +    +  I
Sbjct: 154 TEADVAVAKASLAQAKAAFAAAQQMY-SVLDAQQQSASANITAAQSQIAYAQSQLAKTEI 212

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +    + +     Q +  L  +VP   +  + A     QI H+  G   T+  
Sbjct: 213 RAPSDGIVGNLGART-GGLVQPTMTLFYLVPLPDVYVV-ANYKETQIGHMTIGQPVTLTV 270

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEY----YEVILKITDLAFSDNNIE 404
                    +F  ++  I P    +      +  T  +      V ++I      ++   
Sbjct: 271 DA---QDGVEFTGVVASISPATGSEFSLLPKDNATGNFNKIVQRVPVRIEVTGPREHMHL 327

Query: 405 LRNGFPA 411
           LR G   
Sbjct: 328 LRPGLSV 334



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 66/205 (32%), Gaps = 21/205 (10%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQVENG 75
             +I II L+ W+     +    + G  + E        + V I++  +G I+   V+  
Sbjct: 7   FLLIIIIALVGWAATEGYDW--YAHGRFIEETDNAYIKSDNVSIRAEITGRIETLAVQEN 64

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + QG  L+     +    +      +K  R  +   +  +   + K D  +   ++ +
Sbjct: 65  QHVQQGQLLVRINASDYQAKLAQANAELKVARAALVNTQQQITLQDKKIDEAKANIDAAK 124

Query: 136 E------------QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                        Q+LD          +     ++    SL        +       L+ 
Sbjct: 125 AEVKRGELNLARFQILDKQAFDSKQQLQNTEADVAVAKASLAQAKAAFAAAQQMYSVLDA 184

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEK 208
           +     A +++ Q  +   ++   K
Sbjct: 185 QQQSASANITAAQSQIAYAQSQLAK 209


>gi|331682833|ref|ZP_08383452.1| secretion protein HlyD [Escherichia coli H299]
 gi|331080464|gb|EGI51643.1| secretion protein HlyD [Escherichia coli H299]
          Length = 343

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 53/408 (12%), Positives = 120/408 (29%), Gaps = 99/408 (24%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQVENG 75
           + + G++  I W           S G  +          N+  + S  SG I   +V + 
Sbjct: 17  IILAGVVFFIWW----------VSKGRFIQTTDDAYIGGNITTVASKVSGYISAIEVRDN 66

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +L  +D +    +   +  IK+ + ++++ ++ +                  
Sbjct: 67  QSVKKGDIILRLDDRDYRANVARLEAKIKSRKANLESIQATITM---------------- 110

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                  S+ +S       ++     RL    +   L    +  
Sbjct: 111 ---------------------QQSIIQSASETWQAVKHEEQKRLRDTERYEKLVQSAAIS 149

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+ +   +            +  +ER      L  ++ +        ++    +E     
Sbjct: 150 QQIIDNAR-------FDYQQVAAKERKAANDFLVEKQRLAVLSAQEENVRASIEEVQAAL 202

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L +                          E   + +PI G +    + +  ++ +  
Sbjct: 203 TQALLD-------------------------LEYTLVRAPIDGIVANRSAHT-GSWVEGG 236

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             L+ +VP S+  ++ A     QI  +K G  A +R      ++ + F   IE + P   
Sbjct: 237 TSLVSLVPVSE-LWVDANYKENQIAGMKPGMKAEIRA---DILKGEVFHGHIESLSPATG 292

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   +      T+    V ++I      +    LR G    V  
Sbjct: 293 ASFSLIPIENATGNFTKIVQRVPVRIAFDDAKELKQLLRPGLSVTVSV 340


>gi|291567208|dbj|BAI89480.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 515

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/314 (8%), Positives = 100/314 (31%), Gaps = 23/314 (7%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I+   SG++K+  V  G Q+  G P++  +  +     +    +++  +  +   ++ L
Sbjct: 65  IIRPRVSGLVKEVYVRLGDQVTVGDPIIQIDGSQQLANFEGTIATVQAKQAQLIGAEAQL 124

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + L             + +       +            +    ++ +  L   R     
Sbjct: 125 ESLRADLTRTRAELSFQSQGANLQRSERELEAQMEEQERLEFELQNAQDNLEGARRELDR 184

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA----VSQNDLNQQERIVYKSTLELRE- 232
           R  +  +            ++  +  +L+++       S+ ++  QE+ V  +T  ++  
Sbjct: 185 REAVRQQRQATYERYERLWQEGVVSSDLYDEKLRDRQTSEAEVANQEQQVLAATARVQSA 244

Query: 233 --NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL---------- 280
             N+  Q   +       + +  +    +  +   +   ++    + +++          
Sbjct: 245 RMNLSRQGRTIEAARASVESSRRDLERQIATLEAQIASQEKAIEAQQAQIALIGREIQGA 304

Query: 281 ----TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                  +   +  ++++PI+G +         +       +  I   ++   +   +  
Sbjct: 305 RSGAVAQQVQLDYYSVVAPISGIVGNVPI-KVGDLVDSQTTVTTIR-QNQNLEVNINIPI 362

Query: 337 KQIQHVKKGYTATV 350
             +  ++ G    +
Sbjct: 363 SLLPQLRVGIPVQL 376


>gi|117623590|ref|YP_852503.1| putative secretion protein [Escherichia coli APEC O1]
 gi|218558324|ref|YP_002391237.1| HlyD family secretion protein [Escherichia coli S88]
 gi|331657392|ref|ZP_08358354.1| secretion protein HlyD [Escherichia coli TA206]
 gi|115512714|gb|ABJ00789.1| putative secretion protein [Escherichia coli APEC O1]
 gi|218365093|emb|CAR02800.2| Putative HlyD family secretion protein [Escherichia coli S88]
 gi|323956899|gb|EGB52631.1| HlyD family protein secretion protein [Escherichia coli H263]
 gi|331055640|gb|EGI27649.1| secretion protein HlyD [Escherichia coli TA206]
          Length = 343

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 53/408 (12%), Positives = 120/408 (29%), Gaps = 99/408 (24%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQVENG 75
           + + G++  I W           S G  +          N+  + S  SG I   +V + 
Sbjct: 17  ILLAGVVFFIWW----------VSKGRFIQTTDDAYIGGNITTVASKVSGYISAIEVRDN 66

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +L  +D +    +   +  IK+ + ++++ ++ +                  
Sbjct: 67  QSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLESIQATIAM---------------- 110

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                  S+ +S       ++     RL    +   L    +  
Sbjct: 111 ---------------------QQSIIQSASETWQAVKHEEQKRLRDTERYEKLAQSAAIS 149

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+ +   +            +  +ER      L  ++ +        ++    +E     
Sbjct: 150 QQIIDNAR-------FDYQQVAAKERKAANDFLVEKQRLAVLSAQEENVRASIEEVQAAL 202

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L +                          E   + +PI G +    + +  ++ +  
Sbjct: 203 TQALLD-------------------------LEYTLVRAPIDGIVANRSAHT-GSWVEGG 236

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             L+ +VP S+  ++ A     QI  +K G  A +R      ++ + F   IE + P   
Sbjct: 237 TSLVSLVPVSE-LWVDANYKENQIAGMKPGMKAEIRA---DILKGEVFHGHIESLSPATG 292

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   +      T+    V ++I      +    LR G    V  
Sbjct: 293 ASFSLIPIENATGNFTKIVQRVPVRIAFDDAKELKQLLRPGLSVTVSV 340


>gi|331672868|ref|ZP_08373654.1| secretion protein HlyD [Escherichia coli TA280]
 gi|331070089|gb|EGI41458.1| secretion protein HlyD [Escherichia coli TA280]
          Length = 356

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 52/408 (12%), Positives = 120/408 (29%), Gaps = 99/408 (24%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQVENG 75
           + + G++  I W           S G  +          N+  + S  SG I   +V + 
Sbjct: 30  IILAGVVFFIWW----------VSKGRFIQTTDDAYIGGNITTVASKVSGYISAIEVRDN 79

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +L  +D +    +   +  IK+ + ++++ ++ +                  
Sbjct: 80  QSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLESIQATITM---------------- 123

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                  S+ +S       ++     RL    +   L    +  
Sbjct: 124 ---------------------QQSIIQSASETWQAVKHEEQKRLRDTERYEKLAQSAAIS 162

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+ +   +            +  +ER      +  ++ +        ++    +E     
Sbjct: 163 QQIIDNAR-------FDYQQVAAKERKAANDFMVEKQRLAVLSAQEENVRASIEEVQAAL 215

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L +                          E   + +PI G +    + +  ++ +  
Sbjct: 216 TQALLD-------------------------LEYTLVRAPIDGIVANRSAHT-GSWVEGG 249

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             L+ +VP S+  ++ A     QI  +K G  A +R      ++ + F   IE + P   
Sbjct: 250 TSLVSLVPVSE-LWVDANYKENQIAGMKPGMKAEIRA---DILKGEVFHGHIESLSPATG 305

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   +      T+    V ++I      +    LR G    V  
Sbjct: 306 ASFSLIPIENATGNFTKIVQRVPVRIAFDDAKELKQLLRPGLSVTVSV 353


>gi|237667605|ref|ZP_04527589.1| hypothetical membrane protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|237655953|gb|EEP53509.1| hypothetical membrane protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 459

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 111/357 (31%), Gaps = 54/357 (15%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++    E G ++ +   L   ++ E T  ++  K S  +     D   S         
Sbjct: 66  GKVQSINFELGQEVKKDDVLFVLDNTELTYKLNAAKASYDSASASYDKVASGSAKQAQID 125

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              EKA E+ + +L D    Y                          +  Y N  ++ + 
Sbjct: 126 A--EKALEAAQNELKDAQKAYDIA-----------------------KDQYSNNTNITSA 160

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +       S + +      L+     S+ DL   +  +  S   L          L   
Sbjct: 161 QTA----YDSAKLNYDRTNTLYTAGGASEADLEAAQDKLATSKAALDLAKDNTSMALSTA 216

Query: 245 NELYDEANLEFANYLKEIS--------RDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                 AN  + +     +         ++   + +     + L + + + +   I +P+
Sbjct: 217 ETRLSNANASYNSASANATITSSITNPDNITAAKASMDSAKASLDLAQYSFDNAVIKAPV 276

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G I      S   Y   +Q    I+ +        KVT   IQ++K+G  A +    Y 
Sbjct: 277 DGKISAKNI-SVGEY-TSTQTPSCIITNENTLKTTIKVTETNIQNIKEGLDANI----YI 330

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                 +   +  I P              ++V + IT+    D N+++  G  A V
Sbjct: 331 PSSGASYSGTVYAISPSADTSTGM------FDVKINITNP---DENLKV--GMVANV 376


>gi|269798424|ref|YP_003312324.1| hemolysin D [Veillonella parvula DSM 2008]
 gi|269095053|gb|ACZ25044.1| secretion protein HlyD family protein [Veillonella parvula DSM
           2008]
          Length = 348

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 70/405 (17%), Positives = 130/405 (32%), Gaps = 91/405 (22%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV--VEIKSPFSG--IIKKFQVENG 75
           + +  +I + G+  ++       +  +S  I+ + NV   E+   F G   I    V+ G
Sbjct: 24  IMIAFLIILGGVGYYAYNQY--EAYMASHHIVLQGNVNLREVNVAFRGSDRIASLLVDEG 81

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           + + QG  L            D   ++++  +  I  +++ +  L               
Sbjct: 82  AVVSQGQILGYLHS-------DELNLAVQQAKATIAAQEAIVAKL--------------- 119

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                  S    +     R+ S        + ++  L+   ++ 
Sbjct: 120 --------------------QAGSRPEEIAQASARVTSAEAALAQSKQEAEKLQKSYNAS 159

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                         AVS+  ++  +  V  S  +L              NE     NL  
Sbjct: 160 NG-----------KAVSRQSVDDIQAKVKVSEAKL--------------NEAQQAYNLAV 194

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A   +E   D+ Q Q       S+L   E    Q  + +PI G I   +     + A  S
Sbjct: 195 AGPRQE---DIAQAQAQLDSMKSELARQEFLLNQTVLTAPIDGVITA-RLLQVGDMASPS 250

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
            P+ K+   +   ++R  V  + +  +  G  A V    Y +         I  I  +  
Sbjct: 251 TPVFKLA-ENTKKWVRVYVNERDLGKIYNGMAANVTTDTYKNE---PIHGTIGYISSVAE 306

Query: 375 ----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               S +  +++T   YEV + + D      N  LR G PA V  
Sbjct: 307 FTPKSVETEDVRTTLVYEVRVYVDDP-----NNRLRLGMPATVSI 346


>gi|78063775|ref|YP_373683.1| HlyD family secretion protein [Burkholderia sp. 383]
 gi|77971660|gb|ABB13039.1| Secretion protein, HlyD family [Burkholderia sp. 383]
          Length = 372

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 54/416 (12%), Positives = 128/416 (30%), Gaps = 65/416 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
               R H  +      +  +   G   W++   IE +  +        ++V +    +G 
Sbjct: 11  ARFARRHWIAAGVFITVIALAGFGWRWWTVGRFIEHTDDAY----VRADIVTVSPRVAGY 66

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V++   + +G  L+T +D +    +D  + ++      +  E++A   L+     
Sbjct: 67  VARVAVDDNQPVKRGDVLVTLDDRDYRAKLDDAQAAVAAADATLQAEEAAAATLD----- 121

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                                   ++ + RS+          ++
Sbjct: 122 ---------------------------------------AQVGQQRSVIEQAQ---ADAA 139

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             RA  +    D    + L  ++A S     Q      K+  EL       +        
Sbjct: 140 AARAEATRRDADAVRYQQLLAESAASGQRWEQAHADALKARAELARASAAVR-------- 191

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             D+          + +  +EQ +   A   +KL + +   E   I +   GTI   ++ 
Sbjct: 192 AQDDQQTVLRRRRAQSTAAIEQARARLAASRAKLALAQLDVEHTVIRATRDGTI-GQRAV 250

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKKFKA 365
            +  Y +   PL+ +VP   +  + A     Q+  +  G    +    Y+      +   
Sbjct: 251 RAGQYVEVGMPLLAVVPLRDVYVV-ANFKETQLGAMHDGQPVEIDVDTYSGRTLHGRVLG 309

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTAK 418
           +        +    +  T  + +++ ++     L    + + LR G         +
Sbjct: 310 LAPGSGAEFALLPPDNATGNFTKIVQRVPVKIRLDAPPSGLVLRPGMSVIARVDTR 365


>gi|299771267|ref|YP_003733293.1| Multidrug resistance protein A [Acinetobacter sp. DR1]
 gi|298701355|gb|ADI91920.1| Multidrug resistance protein A [Acinetobacter sp. DR1]
          Length = 383

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 115/371 (30%), Gaps = 65/371 (17%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           +I S  SG + +  V++   + +G  L+  +D +    +   +  +   +       +  
Sbjct: 68  QITSMVSGQVAQVVVKDTQTVHRGEVLVRIDDRDAKIALAQAEAELAKAKRQYKQTAANS 127

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             LN++  V      S + Q+      Y     ++                         
Sbjct: 128 SSLNSQVVVRADEINSAKAQVAQAQADYDKAGLELNRRA--------------------- 166

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIH 235
                                      L    AVS+ +L + +  V   K+ LEL +   
Sbjct: 167 --------------------------QLAASGAVSKEELTKAQSAVETAKAGLELAKAGL 200

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            Q +  R   E    AN      + E+S              + +   +   E+  I +P
Sbjct: 201 AQASSSRKAAESTLAANEALIQGVSEVST------PDVQVAQAHVEQAQLDLERTVIRAP 254

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +   ++            +M IVP +   Y+ A     Q++ V+ G   T+    Y
Sbjct: 255 VDGVVTR-RNIQVGQRVAPGTSMMMIVPLND-LYVDANFKESQLKKVRPGQIVTLTSDLY 312

Query: 356 AD-----IREKKFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRN 407
            D      +   F         +I  Q+      +  +   V + +     +++ + +  
Sbjct: 313 GDDVEYHGKVMGFSGGTGSAFALIPAQNATGNWIKVVQRLPVRIALDPKELAEHPLRVGL 372

Query: 408 GFPAEVLFTAK 418
              A+V  +AK
Sbjct: 373 SMEAKVDLSAK 383


>gi|188578834|ref|YP_001915763.1| putative secretion protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188523286|gb|ACD61231.1| putative secretion protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 425

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 49/388 (12%), Positives = 123/388 (31%), Gaps = 58/388 (14%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           + + ++  +++   G++ +     GS + +G  LL                         
Sbjct: 68  VPQTDLTTVRAGLGGVVTEMVRGPGSAVKRGDTLLRI--------------------ASY 107

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
               S           L+ +F    + LL+ +       +      +   Y         
Sbjct: 108 AASASGTGAWQQ----LDDSFVKSSQMLLEKISLVADRRAAAGAENLGRQYA-------- 155

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
                       NK + L+  ++  Q DL + + L      S  D  + + I   +    
Sbjct: 156 ----------CRNKITSLKKQIADKQFDLKVQEELLA----SWADAIKLQYISRYAEQSQ 201

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R  I   +  +  + +         ++  K+   D E      A    +L+  +   ++ 
Sbjct: 202 RTIISNTRQSVATLTDGLVSEQATLSSLKKQQLLDDESFDSEVASYRQQLSEQKLEHDRT 261

Query: 291 ------TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
                 ++++P+ G +V        +   +  P++ I P +    ++  +    I  V  
Sbjct: 262 ALGFEQSLVAPVDGYVVSVPVR-KGSGVTEGMPVVSIAPSALSFRLKGNLPSALIGWVAD 320

Query: 345 GYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           G    + +  Y      +F   + ++   P++    +   ++  ++  +   D   +   
Sbjct: 321 GSRVRLHYNAYPYQIYGEFTGRVCEVARAPLMLPDSSTQASETMFDFAVCPDDAEITIGG 380

Query: 403 IELRN--GFPAEVLFTAKNTTLAQEIIH 428
           I  R   G  A V+ T+    + Q ++ 
Sbjct: 381 IH-RPVLGLQAVVVLTSPPRRIYQWLLR 407


>gi|17158768|ref|NP_478279.1| hypothetical protein all7632 [Nostoc sp. PCC 7120]
 gi|17134717|dbj|BAB77275.1| all7632 [Nostoc sp. PCC 7120]
          Length = 561

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/386 (11%), Positives = 124/386 (32%), Gaps = 75/386 (19%)

Query: 39  PIEISVSSSGEIL--NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
            + + + ++G+I       V          + +  VE G+ + +G P+            
Sbjct: 76  KLAVGIKTTGQIETLPSQRVEVTTPISGAKVVELLVEPGANVKKGQPV------------ 123

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
                                  + +  D++E    S+E+                   G
Sbjct: 124 ----------------------AVVSSPDLVELRVNSQEK----------------LAQG 145

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            + + ++        ++    +     + +  ++ ++  Q+     + L +  A+ +   
Sbjct: 146 QADLRQAQADLRLAQQNYDRYQQIAAAEIAQAQSQVAFAQEKYNKDRQLADAGALPRRTA 205

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +  + ++  +L      +  +         ++++E A    ++S    Q +      
Sbjct: 206 LESQTQLAEAKAKLTTANSRRDVIEAEAKLKTAQSSVELAQSKIQLSSTTYQTR------ 259

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ-QSQPLMKIVPHSKLTYIRAKVT 335
           +S+L      +   T+ +PI+G +   +  +     Q     LM IV +    +  A + 
Sbjct: 260 LSQLGNRANAQGLVTVNAPISGKVADREV-TLGQTFQDAGGKLMTIV-NDSRVFATANIY 317

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            K +  +K G   +++     +     F   I  I+ +++               +    
Sbjct: 318 EKDLDKIKTGQRVSLKVASVPNRT---FNGRIAVIESVVAGDT-----------RVVPVK 363

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNTT 421
               +++  L+ G  AE+      T+
Sbjct: 364 AEIDNSSGVLKPGMFAELEVLTNQTS 389


>gi|91210632|ref|YP_540618.1| putative secretion protein [Escherichia coli UTI89]
 gi|237705368|ref|ZP_04535849.1| multidrug resistance protein A [Escherichia sp. 3_2_53FAA]
 gi|91072206|gb|ABE07087.1| putative secretion protein [Escherichia coli UTI89]
 gi|226900125|gb|EEH86384.1| multidrug resistance protein A [Escherichia sp. 3_2_53FAA]
 gi|294490809|gb|ADE89565.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli IHE3034]
 gi|307627088|gb|ADN71392.1| Putative HlyD family secretion protein [Escherichia coli UM146]
 gi|315289070|gb|EFU48468.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 110-3]
 gi|315297168|gb|EFU56448.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 16-3]
 gi|320195648|gb|EFW70273.1| Multidrug resistance protein A [Escherichia coli WV_060327]
 gi|323187572|gb|EFZ72881.1| hlyD family secretion family protein [Escherichia coli RN587/1]
 gi|323949059|gb|EGB44951.1| HlyD family protein secretion protein [Escherichia coli H252]
          Length = 342

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 53/408 (12%), Positives = 120/408 (29%), Gaps = 99/408 (24%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQVENG 75
           + + G++  I W           S G  +          N+  + S  SG I   +V + 
Sbjct: 16  ILLAGVVFFIWW----------VSKGRFIQTTDDAYIGGNITTVASKVSGYISAIEVRDN 65

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +L  +D +    +   +  IK+ + ++++ ++ +                  
Sbjct: 66  QSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLESIQATIAM---------------- 109

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                  S+ +S       ++     RL    +   L    +  
Sbjct: 110 ---------------------QQSIIQSASETWQAVKHEEQKRLRDTERYEKLAQSAAIS 148

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+ +   +            +  +ER      L  ++ +        ++    +E     
Sbjct: 149 QQIIDNAR-------FDYQQVAAKERKAANDFLVEKQRLAVLSAQEENVRASIEEVQAAL 201

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L +                          E   + +PI G +    + +  ++ +  
Sbjct: 202 TQALLD-------------------------LEYTLVRAPIDGIVANRSAHT-GSWVEGG 235

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             L+ +VP S+  ++ A     QI  +K G  A +R      ++ + F   IE + P   
Sbjct: 236 TSLVSLVPVSE-LWVDANYKENQIAGMKPGMKAEIRA---DILKGEVFHGHIESLSPATG 291

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   +      T+    V ++I      +    LR G    V  
Sbjct: 292 ASFSLIPIENATGNFTKIVQRVPVRIAFDDAKELKQLLRPGLSVTVSV 339


>gi|53803696|ref|YP_114675.1| HlyD family secretion protein [Methylococcus capsulatus str. Bath]
 gi|53757457|gb|AAU91748.1| HlyD family secretion protein [Methylococcus capsulatus str. Bath]
          Length = 341

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 109/318 (34%), Gaps = 27/318 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L+ H+    S       +  + +     + + L     +            +++    ++
Sbjct: 42  LKAHLILLSSKETGYVKEVLLQDNQQVRKGDLLAVIDDQEFKARVAEAGAEVAATAARIE 101

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
              +  R+      + +   +   A     ++DL  +  L +  A S   L+  E    +
Sbjct: 102 ALESEKRTQAARVREEDANIASALADHDRSRRDLQRLDRLADAGAASAQSLDGAEAAYKQ 161

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +   L +N   +      +  L               +  + + +       ++L +   
Sbjct: 162 AKALLDKNRSARDQAEIRLIAL---------------NALIAETRAQLQRAQARLELARI 206

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             E   IL+PI GT+  N S       Q    +  ++P     ++ A     QI+H++ G
Sbjct: 207 DLENTRILAPIDGTV-GNLSLQVGQLLQPGSVIAYLIPADG-VFVEANFKETQIEHLRIG 264

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSD 400
            TA+V    Y D     F+A+++ + P    +         T  + +++ ++   LAF+ 
Sbjct: 265 QTASVVVDAYPDR---PFEAVVDSLAPASGSEFSILPPENATGNFTKIVRRLPVKLAFAP 321

Query: 401 NN--IELRNGFPAEVLFT 416
                 L+ G   +V   
Sbjct: 322 GTDLSLLKPGLSVQVSIK 339


>gi|186683380|ref|YP_001866576.1| heterocyst specific ABC-transporter membrane fusion protein
           DevB-like protein [Nostoc punctiforme PCC 73102]
 gi|186465832|gb|ACC81633.1| heterocyst specific ABC-transporter, membrane fusion protein
           DevB-like protein [Nostoc punctiforme PCC 73102]
          Length = 440

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/331 (13%), Positives = 115/331 (34%), Gaps = 45/331 (13%)

Query: 43  SVSSSGEILNEDNVVEIKSP-----FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
           +V++ G +  +  V+++ +P         + K  V+ G ++  G  +   ++ E      
Sbjct: 60  AVAARGYLEPKGEVIKLSAPTSIQGEGVRLAKLLVKQGDKVKTGQVVAILDNQE------ 113

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                    R     E++  +   ++  + +    ++   +     KY  T +++   G 
Sbjct: 114 ---------RLQAALEQAKTEVNVSQAKLEQTKAGAKTGDINAQTAKYQQTRAEL--EGQ 162

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            ++ R+    L     +   +         ++A L   Q +      L++K  VS +  +
Sbjct: 163 LTIQRATIANLAA--QLQGEKNSQAATIKRIQAELQYAQTECDRYNALYQKGVVSASQRD 220

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                   +  +L E     + ++    E   EA   F   L  + +++E+ + T     
Sbjct: 221 STCLQNNTAQEQLAEAESNLQKIITTRTEQVKEAQANFNRTLATLKKEVEEAKATLNATA 280

Query: 278 S----KLTILEKTREQKT--------------ILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                 + + E   +                 + SP  G +   +  + +     +  ++
Sbjct: 281 EVRPVDVNVAESELKNAQAAVKKSQANLNLAYVRSPKNGQV--LKIHTWAGEVISNDGII 338

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           ++   ++  Y  A+V    I  V+ G  ATV
Sbjct: 339 ELG-QTEQMYAIAEVYETDISKVRLGQQATV 368


>gi|209967286|ref|YP_002300201.1| multidrug resistance protein A [Rhodospirillum centenum SW]
 gi|209960752|gb|ACJ01389.1| multidrug resistance protein A [Rhodospirillum centenum SW]
          Length = 390

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 48/366 (13%), Positives = 101/366 (27%), Gaps = 61/366 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           +I    S  +K   V +  ++++G  L+  +D +T   +   +   +  R   +   +  
Sbjct: 68  QITPLISAPVKAVPVSDTQRVVRGDVLVELDDADTRIALARAEAEWQQARRQFERTVATS 127

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             L  +    E   E    QL+     +                                
Sbjct: 128 AALAGQVAAREAEIERARAQLVVAQANFDK------------------------------ 157

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
                             + DL   +NL +  AVS  +L         +      N+   
Sbjct: 158 -----------------AKIDLERRRNLAKGGAVSAEELTTATNAFTAAQA----NLTLA 196

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +  +         A  E +     ++          A   ++L      +E+  I +P+ 
Sbjct: 197 RAGVTQAEAALAAAKGELSANEALVAGSTVDTDPAVAAARARLDQARLDQERTLIRAPVD 256

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-- 355
           G +   Q            P+M IVP     Y+ A     Q+  V+ G   T+    Y  
Sbjct: 257 GIVTRRQV-QVGQRVAAGAPVMTIVPVD-QLYVDANFKEGQLTKVRVGQKVTLVSDLYGP 314

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE------VILKITDLAFSDNNIELRNGF 409
             +   +   +        +       T  + +      V + +       + + +    
Sbjct: 315 DVVYHGRVTGLAGGTGAAFALIPAQNATGNWIKVVQRLPVRVTLDPDELKAHPLRVGLSM 374

Query: 410 PAEVLF 415
            AE+  
Sbjct: 375 DAEIDL 380


>gi|152983987|ref|YP_001347487.1| multidrug resistance protein A [Pseudomonas aeruginosa PA7]
 gi|150959145|gb|ABR81170.1| multidrug resistance protein A [Pseudomonas aeruginosa PA7]
          Length = 393

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 45/370 (12%), Positives = 104/370 (28%), Gaps = 68/370 (18%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I +  SG + +  V++   +  G PL+   D +    +                     
Sbjct: 75  TISAKVSGYVAEVLVQDNQAVAAGDPLVRIHDRDYQARL--------------------- 113

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                                     +     S+       +   +L  +L   +++   
Sbjct: 114 -----------------------LQARARQGESRAAVAAQQAALVTLDARLKEQQALIDQ 150

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
                      +A     Q D    ++L  + A S   L        ++   L       
Sbjct: 151 ---ASADIESAKAERHRAQLDFQRYRDLVAQQAASSQRLESVTADYARARSALSRAEAAA 207

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 +  L            ++ +  LE+ +   A+  + L +     E   I +PIA
Sbjct: 208 SRQRTRMAVLKAS--------REQAAALLERQKARSAEADASLALASNELEDTLIRAPIA 259

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +V  +      Y     PL+ +VP  +   + A     Q++ +  G    +R   + D
Sbjct: 260 G-VVGQRRVRQRQYVTPGLPLLAVVPVEQSYVV-ANYKETQLRRMHPGQPVEIRVDSFPD 317

Query: 358 IREKKFKAIIEKIDP----IISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGF 409
                    ++   P    + +    +  T  + +++    +K+     +   + +  G 
Sbjct: 318 A---VLHGRVDSFSPGSGAVFALLPPDNATGNFTKIVQRFPIKVVLDPDARQQVAILPGM 374

Query: 410 PAEVLFTAKN 419
                   + 
Sbjct: 375 SVITEVDTRQ 384


>gi|282895642|ref|ZP_06303767.1| ABC-transporter DevB family protein [Raphidiopsis brookii D9]
 gi|281199336|gb|EFA74201.1| ABC-transporter DevB family protein [Raphidiopsis brookii D9]
          Length = 419

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 54/371 (14%), Positives = 132/371 (35%), Gaps = 27/371 (7%)

Query: 44  VSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLIDLK 99
           V++ G +  E  V+++ +P       ++K  ++ G  +  G  +   +   +    ++  
Sbjct: 47  VTALGRLEPETPVIKLSAPLALDGDRVEKILLQEGDVVKAGQIIAILDSRNKLQSAVERA 106

Query: 100 KVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           +  +   +  ++  KS      + ++   +EK     E     ++       ++      
Sbjct: 107 QKQVNVAQAKLEQIKSGAKPGEIQSQKANVEKLKAEYEGNKNAYIQTIARIEAQWQGDRT 166

Query: 158 SSV--YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           +     R L  +L   +S Y     L ++ ++  +L+ S + ++            S+  
Sbjct: 167 AQEANIRQLAAELKNAKSEYQRYQQLYSQGAVSNSLIDSKRLNVE----------TSEQK 216

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHIN---ELYDEANLEFANYLKEISR-DLEQNQR 271
           L +   I+ +      + + E +  L+ I+        A  E  N + E+   D+   + 
Sbjct: 217 LTEARAILKRINTTASKQMAEARVELKRISNTGTKQIRAAEETLNSIAEVRAVDVNLART 276

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                +S L   +   E   I +P++G I   +  +       +  +      ++   + 
Sbjct: 277 ELESAISVLDSAKTDLESAFIRAPMSGRI--LKIHTRVGEKITASGIADFA-QTEKMSVV 333

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEYYEV 389
           A+V    I  VK G  A +  P  ++  E     I  +++   + S Q          EV
Sbjct: 334 AEVYQTDINRVKIGQKAKIMSPTLSEKLEGNVIQIGLQVNRQNVFSNQPGENLDSRVVEV 393

Query: 390 ILKITDLAFSD 400
            +++T      
Sbjct: 394 KIRLTPQDSKK 404


>gi|194398189|ref|YP_002037194.1| BlpC ABC transporter [Streptococcus pneumoniae G54]
 gi|194357856|gb|ACF56304.1| BlpC ABC transporter [Streptococcus pneumoniae G54]
          Length = 453

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 60/439 (13%), Positives = 144/439 (32%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEIAPTSVIASIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +             ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIXYSEXMEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE----------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
              E          +++   ++      +T         +S   +++ ++T+++      
Sbjct: 132 GEDEFGYHNTFMNFTKQSHDIELGITKTNTEVSNQANLSNSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +     +++ + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIINNRARLPTGNPHQSILNRYLVASQGQTQGTAEEPFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ SP  G +  N  F   N       + +I P    ++   I   V+   +  + KG 
Sbjct: 312 NTLTSPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGNHGT-TIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTTKKTYFDY 443


>gi|67924385|ref|ZP_00517815.1| Secretion protein HlyD [Crocosphaera watsonii WH 8501]
 gi|67853778|gb|EAM49107.1| Secretion protein HlyD [Crocosphaera watsonii WH 8501]
          Length = 510

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 44/396 (11%), Positives = 126/396 (31%), Gaps = 54/396 (13%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITW-----------SILLP------IEISVSSSGEILN 52
            R     +    L+ +IG    +TW                      ++++  ++G + +
Sbjct: 29  PRRKRWPIVIGILVVLIGTGSGVTWWLSQQNNNTSLGAFAQKTPPTSVKLATITTGVVKS 88

Query: 53  EDNVV--------EIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
             +VV         I  P  +G I +  V+ G +I +G  ++  ++ +    +   +  +
Sbjct: 89  VSDVVGTLEADSAVILKPEITGRINRILVQEGDRISKGQLIMELDNSDWQTELLEAQAQL 148

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            N +  +   ++                 +R E + +   +     +++ N    S    
Sbjct: 149 ANAQARLAEREAG----------------NRIEDIEEAKARLREAKARLRNAQTGSSLEE 192

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +     ++++        E +      L           +    ++  +  +L Q +R +
Sbjct: 193 IAQAKAQVKAAEARAELAEQRVGRYEGLQEQGAISADEYQEFVTESRSAIAELEQAQRRL 252

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +       +I E + ++    +            +      + Q +   A+ ++++   
Sbjct: 253 SQLETRRLIDIDELQAVVDREAQNLRRLETGPRQEV------IAQAKADVAESLAQVRRA 306

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E    +  I++PI+G +      +  ++  Q   L  +   + L  +   V  +    ++
Sbjct: 307 EVNVGKTRIVAPISGVVGDIPVDA-GDFVDQGDTLTSLT-ANNLLELNLSVPLEDAPRLR 364

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            G    +             +  I  I P ++    
Sbjct: 365 LGLPVEIM----DKQGATLARGNISFISPDVTADSQ 396


>gi|293409733|ref|ZP_06653309.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291470201|gb|EFF12685.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 342

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 53/408 (12%), Positives = 119/408 (29%), Gaps = 99/408 (24%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQVENG 75
           + + G++  I W           S G  +          N+  + S  SG I   +V + 
Sbjct: 16  IILAGVVFFIWW----------VSKGRFIQTTDDAYIGGNITTVASKVSGYISAIEVRDN 65

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +L  +D +    +   +  IK+ + ++++ ++ +                  
Sbjct: 66  QSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLESIQATIAM---------------- 109

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                  S+ +S       ++     RL    +   L    +  
Sbjct: 110 ---------------------QQSIIQSASETWQAVKHEEQKRLRDTERYEKLAQSAAIS 148

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+ +   +            +  +ER      L  ++ +        +     +E     
Sbjct: 149 QQIIDNAR-------FDYQQVAAKERKAANDFLVEKQRLAVLSAQEENARASIEEVQAAL 201

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L +                          E   + +PI G +    + +  ++ +  
Sbjct: 202 TQALLD-------------------------LEYTLVRAPIDGIVANRSAHT-GSWVEGG 235

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             L+ +VP S+  ++ A     QI  +K G  A +R      ++ + F   IE + P   
Sbjct: 236 TSLVSLVPVSE-LWVDANYKENQIAGMKPGMKAEIRA---DILKGEVFHGHIESLSPATG 291

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   +      T+    V ++I      +    LR G    V  
Sbjct: 292 ASFSLIPIENATGNFTKIVQRVPVRIAFDDAKELKQLLRPGLSVTVSV 339


>gi|158334162|ref|YP_001515334.1| membrane fusion protein DevB [Acaryochloris marina MBIC11017]
 gi|158304403|gb|ABW26020.1| membrane fusion protein DevB, putative [Acaryochloris marina
           MBIC11017]
          Length = 433

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 47/342 (13%), Positives = 108/342 (31%), Gaps = 19/342 (5%)

Query: 44  VSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +++ G +     +V++ +P       +   +V+ G  +  G P+   +      L ++ +
Sbjct: 57  IAALGRLEPTGEIVKVAAPLTLDGDRLSTLKVKLGDTVQAGDPIAVLDS-RDRLLDEVAQ 115

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +     +   +          +           +L   L     T +++        
Sbjct: 116 AQAQLRVAQVKLAQVQAGAKPGAINAQRATVSQESAELTGQLRIQRQTIARLEAQYEGDR 175

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                        +   + +L    SL +A   S     +   ++       +    +  
Sbjct: 176 SAQTAAVQRLQAELRTAQKELARYQSLYQAGAVSASLFDSKQLSVDTTRQALKQATAELS 235

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R    +   LRE   E   +          A    A   +  S D++  Q         L
Sbjct: 236 RTDGIAQRRLREAQAELGRLETTGQAQVATAQSRLAEVAEVRSVDIQMAQAEVEAARVAL 295

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--IVP--HSKLTYIRAKVTP 336
           T  +K  ++ TI +P  G I+   +       +  + +    IV    ++   + A+V  
Sbjct: 296 TKAQKNLDRATIKAPSDGQILKIYT-------RPGEQMSSDGIVALGQTEQMLVVAEVYQ 348

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             I  V+ G  AT+R   +      + +  + ++   IS+Q 
Sbjct: 349 SDIHRVQVGQAATIRGQGFP----GELRGKVIELGRQISRQQ 386


>gi|254239604|ref|ZP_04932926.1| hypothetical protein PA2G_00221 [Pseudomonas aeruginosa 2192]
 gi|126192982|gb|EAZ57045.1| hypothetical protein PA2G_00221 [Pseudomonas aeruginosa 2192]
          Length = 383

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/367 (11%), Positives = 108/367 (29%), Gaps = 65/367 (17%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SG + +  V + + +  G  LL  +  +    +   +      +  ++ +++ L+
Sbjct: 67  VSAQVSGYVAEVLVADDADVQAGDLLLRLDPRDFRQRLRAAEAREAAAQAALEAQRAKLE 126

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L+                                           +  L + ++I   R
Sbjct: 127 TLD-------------------------------------------RQLLEQAQTISRAR 143

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            D E   +  R      + D    + L +++A S+  L   +    ++    R    E+ 
Sbjct: 144 ADGEAARAEWRR----AETDWRRYRQLADEHATSRQRLENADAAHQRARAAARRASAEEG 199

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                       A     +  +E    L Q Q    +  +   +     +   I +P AG
Sbjct: 200 RQRA--------ARDVLKSRRREAEAALAQRQAELQEAAAARELARHALDDTEIRAPFAG 251

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   +      Y     PL+ +VP  +   + A     Q++ ++ G    +    +   
Sbjct: 252 RVGQRKVR-LRQYVTPGLPLLAVVPLEQAYVV-ANYKETQLERIRPGQPVELEVDTFGRR 309

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEY------YEVILKITDLAFSDNNIELRNGFPAE 412
              +  ++      + +    +  T  +      + V +++   A       L  G    
Sbjct: 310 WRGRVDSVAPASGAVFALLPPDNATGNFTKIVQRFPVRIRLDADAAERG--RLLPGMSVI 367

Query: 413 VLFTAKN 419
                + 
Sbjct: 368 ATVDTRE 374


>gi|288573571|ref|ZP_06391928.1| efflux transporter, RND family, MFP subunit [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569312|gb|EFC90869.1| efflux transporter, RND family, MFP subunit [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 393

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 75/219 (34%), Gaps = 23/219 (10%)

Query: 213 QNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANY------LKEIS 263
           Q ++++ E  +  +  +L E   ++      L    EL     +   +       +    
Sbjct: 93  QANVDKAEAALLTAQADLAEGKASLAHANRALARKKELVGRNLIAKVDLDDAELSVATAR 152

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKI 321
             L   +   A   + L+  E       I+SPI G +   +       A    +  L  I
Sbjct: 153 ATLRALEGKVAQARAALSSSEIDLAHTEIVSPINGVVTAKEVDEGQTVAASLSAPELFTI 212

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
               +   + A +    I  VK+G   +     Y +     F   +++I  +   + +N+
Sbjct: 213 AEDLRRMRVEADIDEADIGSVKEGQDVSFTVDAYPNRT---FSGKVDRI-RLAPTETDNV 268

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            T   Y V     ++  S++++ L  G  AEV       
Sbjct: 269 VT---YTV-----EIGVSNDDLSLYPGMTAEVAVVTDRR 299



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 90/265 (33%), Gaps = 43/265 (16%)

Query: 17  LKRMTLLSIIGIIGLITWSILL-----PIE------------ISVSSSGEILNEDNVVEI 59
           +K++  L +I  IG   W          I              +VS++G +    N V +
Sbjct: 1   MKKLFALILIATIGAGIWWYRGDGEKQRISYRTESLRRGDMVKTVSATGTLEAI-NTVLV 59

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
            S  SG + +  V+   ++ +G  L   +       +D  + ++   +  +   K++L  
Sbjct: 60  GSQVSGNLSEVLVDYNDEVTKGQLLARIDPTLFQANVDKAEAALLTAQADLAEGKASLAH 119

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            N                    L +      +     +      L +   R         
Sbjct: 120 AN------------------RALARKKELVGRNLIAKVDLDDAELSVATAR-----ATLR 156

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            LE K +  RA LSS + DL   + +      V+  ++++ + +    +      I E  
Sbjct: 157 ALEGKVAQARAALSSSEIDLAHTEIVSPINGVVTAKEVDEGQTVAASLSAPELFTIAEDL 216

Query: 239 NMLRHINELYDEANLEFANYLKEIS 263
             +R +    DEA++      +++S
Sbjct: 217 RRMR-VEADIDEADIGSVKEGQDVS 240


>gi|254248757|ref|ZP_04942077.1| Secretion protein HlyD [Burkholderia cenocepacia PC184]
 gi|124875258|gb|EAY65248.1| Secretion protein HlyD [Burkholderia cenocepacia PC184]
          Length = 374

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 44/363 (12%), Positives = 102/363 (28%), Gaps = 82/363 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V +   +  G PL+  +       +   +V++      +D  ++ +       
Sbjct: 78  GYVTDVYVRDNQPVKAGDPLVRLD-------VRQYQVALAQALATVDARRADIARAEADI 130

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                          +   L + D + K
Sbjct: 131 S---------------------------------------------QQRANLEQADAQAK 145

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S + A  +S   + T    L    A +   +            +L+    +    L   
Sbjct: 146 VSRINAQHAS--DEYTRYAPLAATGAETHERV-----------ADLKSTRDQAAATLAAN 192

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N     A  + A++    +  L+Q +       +     +   +   + S +AG +  ++
Sbjct: 193 NASIAAARTQIASF----TAQLQQARAQLEAAQASAAQAQLDLDNTIVRSTLAGRV-GDR 247

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     Y Q    L+ +VP   +  + A     QI +++ G    +      D       
Sbjct: 248 TVRVGQYVQPGTRLLTVVPVDSIYLV-ANFKETQIGNMRIGQPVELHVDALPD---GPLS 303

Query: 365 AIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +++   P        +  +      T+    V ++I   A +     L  G    V   
Sbjct: 304 GVVDSFAPGTGAQFALLPPENATGNFTKIVQRVPVRIRLAANARAQRMLLPGLSVTVDVD 363

Query: 417 AKN 419
            ++
Sbjct: 364 TRS 366


>gi|262369101|ref|ZP_06062430.1| multidrug resistance secretion protein [Acinetobacter johnsonii
           SH046]
 gi|262316779|gb|EEY97817.1| multidrug resistance secretion protein [Acinetobacter johnsonii
           SH046]
          Length = 383

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 61/420 (14%), Positives = 132/420 (31%), Gaps = 64/420 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + LK     SL  + ++ II  I  + W +        + +  +  E     I S  +G 
Sbjct: 20  QALKAKRKKSLGFVAMILIIAAILFLIWKLFFN-HSVSTDNAYVGAETAS--ITSMVTGQ 76

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++K  V +   + QG  L+  +  +    +   +  +   +       +    LN++  V
Sbjct: 77  VEKVLVSDTQTVKQGDVLVLVDHRDAEIAVAQAQAELLKAQRQYKQSAANSSSLNSQVFV 136

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            + A  S                                                E + +
Sbjct: 137 SDDAIHS-----------------------------------------------AEAQVA 149

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +A L   Q DL   + L    A+S+ +L+        +  +   N+ +        ++
Sbjct: 150 KAKAELDKAQDDLNRRQQLSATGAISKEELSTA--QAALNNAQAGYNLAQAGLAQAKSSQ 207

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              ++NL     L + S +   +        +KL       E+  I +P  G +   +  
Sbjct: 208 KAAQSNLAANEALIKGSNE--NSTPDVLVAQAKLKQALLDLERTEIKAPFDGVVTSRKI- 264

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-----REK 361
                      LM +VP     Y+ A     Q+++V+ G  A +    Y D         
Sbjct: 265 QVGQRVAPGSVLMVVVPI-SQIYVDANFKESQLENVRPGQKAVLTSDLYGDSVEFHGTVL 323

Query: 362 KFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            F         +I  Q+      +  +   V +++     +++ + +     A++   +K
Sbjct: 324 GFSGGTGSAFALIPAQNATGNWIKVVQRLPVRIQLDPKELAEHPLRVGLSMEAQIDLKSK 383


>gi|326201724|ref|ZP_08191595.1| efflux transporter, RND family, MFP subunit [Clostridium
           papyrosolvens DSM 2782]
 gi|325988324|gb|EGD49149.1| efflux transporter, RND family, MFP subunit [Clostridium
           papyrosolvens DSM 2782]
          Length = 645

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 56/413 (13%), Positives = 125/413 (30%), Gaps = 57/413 (13%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +E+S+S SG I +      + +    IIK    + G  + +G  L   +D +    I 
Sbjct: 55  GNMEVSLSGSGTIESASTSDVMSNVQGKIIKS-YKKVGDTVKKGDLLYEMDDTDAKLQIQ 113

Query: 98  LKKVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHS-------- 147
             + SI+  +              +   +        + +   ++      +        
Sbjct: 114 KIQNSIEQQQLSESNTSKNYSNMSVTAPFSGKVTGVSAVKGDNVNNGMSLFTITDTSKLK 173

Query: 148 -----TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                + + +    I    +    + T   S  +  +     ++    ++      +   
Sbjct: 174 LSVPLSTANIPFVKIGQSVKVNLQQFTDTISGVVTEIGDNTHTAATGGMVRDVTVTVNNP 233

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-- 260
             L +++  S  D          S  E R +   ++ +           N++   ++K  
Sbjct: 234 GTLTDESMASSVDFKLTNGTEVSSKEESRFSYASRETVKAQAQGSLSAVNVKENQFVKKG 293

Query: 261 EISRDLEQNQRTF---------ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           ++   +E +Q             D  ++L   +K  E   ILS I GT+      +  + 
Sbjct: 294 DLLVRIENDQLQLTFKTDSLKMQDLQNQLDAAQKQLEDYKILSSIDGTVTALTYKT-GDS 352

Query: 312 AQQSQPLMK---------IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +    L+          ++P  +L           I  +K G  ATV      +  ++ 
Sbjct: 353 VKSGDTLISLRDFNQMQFVIPIDEL----------DISKIKVGQKATVTVDALPETTKQP 402

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               +  I    + +  +      Y V +KI +         L  G  A    
Sbjct: 403 LDGEV--ISR--AMEGTSSNGVATYNVTIKINETE------NLLAGMNANANI 445


>gi|127512472|ref|YP_001093669.1| secretion protein HlyD family protein [Shewanella loihica PV-4]
 gi|126637767|gb|ABO23410.1| secretion protein HlyD family protein [Shewanella loihica PV-4]
          Length = 352

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 110/319 (34%), Gaps = 28/319 (8%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I    + +  + N   + +  +    E L     + +         G++    ++  
Sbjct: 52  QGEISQVSAEVSGIINHVYITDNQYVEAGELLAQIDDRDYLAQYNQAKAGLTMAQAAIAN 111

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R++   ++   +  +     A  + H+ +   ++NL +K  +SQ+    Q     ++
Sbjct: 112 IDERIKLQQISIKQVSTQIDSTMADATFHRAEWHRLQNLLDKELISQSQFEAQTNKNNQA 171

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             +L  +  +  +  + +N L                 D  +         + L + +  
Sbjct: 172 KAKLAASQLQLSSAKQQLNTL---------------RSDKARLNAQAEQANAALALAKLR 216

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            E   + +P+AG I  N++  +  +A +  PL+ IVP     +I A     QI ++  G 
Sbjct: 217 LENTQVRAPVAGII-GNRALRAGRFASKGAPLLAIVPVES-IWIEANYKETQITNILPGQ 274

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAF 398
              V    +    E+  K  +  I P    Q      +  T  + +++    +KI     
Sbjct: 275 LVDVMLDSFP---EEHLKGRVLSIAPATGAQFGLLPPDNATGNFVKIVQRVPIKIALEIP 331

Query: 399 SDNNIELRNGFPAEVLFTA 417
                 +  G  AEV    
Sbjct: 332 RALQGRIVPGLSAEVTIDT 350



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/201 (10%), Positives = 77/201 (38%), Gaps = 10/201 (4%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            M + L++     +K+  ++S + +   + +    P +  + S+     +  + ++ +  
Sbjct: 4   IMKQLLRKTQGNKIKKAIIISSMMLFASLFYYYQFP-KAGLISTDNAYVQGEISQVSAEV 62

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGII    + +   +  G  L   +D +               +  +   ++A+  ++ +
Sbjct: 63  SGIINHVYITDNQYVEAGELLAQIDDRDYLA-------QYNQAKAGLTMAQAAIANIDER 115

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             + + + +    Q+   +    +T  +   + + ++     +  ++  +        + 
Sbjct: 116 IKLQQISIKQVSTQIDSTMA--DATFHRAEWHRLQNLLDKELISQSQFEAQTNKNNQAKA 173

Query: 184 KSSLLRALLSSHQKDLTMMKN 204
           K +  +  LSS ++ L  +++
Sbjct: 174 KLAASQLQLSSAKQQLNTLRS 194


>gi|291528460|emb|CBK94046.1| hypothetical protein ERE_21550 [Eubacterium rectale M104/1]
          Length = 376

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/422 (11%), Positives = 138/422 (32%), Gaps = 77/422 (18%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +N PA    +  +  I +   + WS       ++ + G + N+++   + S    I+   
Sbjct: 20  KNPPAFGYILITVVAIFMTIAVVWSTKASKVYTIQAQGNVTNDESNYVMCSYTGEILDCS 79

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
             + G  +  G  L T +  +               +  ++  + +     ++Y +L K+
Sbjct: 80  M-KEGELVKAGDVLFTVKSTD-----------YDLQQTQLEENRQSYVEQVSQYQLLIKS 127

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +             +   +K  +    S+Y + K ++ + +               ++A
Sbjct: 128 IKD---------DTNYFDEAKAEDGLYWSLYETYKSQIDQNKVDVSTYQAYGYTDDQIQA 178

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L ++Q              + +   +  +                            +E
Sbjct: 179 QLETNQ------------GKIDEVYYSAIQ----------------------SAEAKIEE 204

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           ANL+ A+   +                  L  +   ++   + +  +G +    ++ S  
Sbjct: 205 ANLQIASIDAQ------------------LAAVTSGQDAYEVKATTSGVLHMLGNYKSGM 246

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q +  +  I P +   ++ A V+   +  + +G +  V     +         ++ +I
Sbjct: 247 VVQTTTTVATITPENSQRFLEAYVSTSDMARMHEGDSVQVVVDGLSQNVYGTISGMVSRI 306

Query: 371 DP-IISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           D  + +Q+ ++    + ++V++ +     L+   + +++ NG  A         T    +
Sbjct: 307 DSNVTTQESSDGSASQAFKVMIVLNQDYVLSREGDKVDITNGMTAVARIRYDKVTYFNYV 366

Query: 427 IH 428
           + 
Sbjct: 367 LE 368


>gi|50086617|ref|YP_048127.1| putative multidrug resistance efflux pump [Acinetobacter sp. ADP1]
 gi|49532591|emb|CAG70305.1| putative multidrug resistance efflux pump [Acinetobacter sp. ADP1]
          Length = 358

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 44/369 (11%), Positives = 102/369 (27%), Gaps = 81/369 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + ++  I    SG + +   +    + +  PL+  ++              ++L+   D
Sbjct: 55  VKSDLTWIMPKVSGEVIELLAKENQYVEKDQPLVILDN--------------RDLQARAD 100

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             K+ L                                              L ++    
Sbjct: 101 QAKAMLAL----------------------------------------KQAGLSVQSENE 120

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +S     L+ ++     +A +S    D    + L ++  +++      +     +  +L 
Sbjct: 121 KSAQSTILEAQSARDAAQADVSRLSSDYRRYQQLLKEGVITRQRFEATQAEYLSAQAQLN 180

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                              A          +     Q      +  + + + +       
Sbjct: 181 ---------------KAQAAIQAAQAQFSGVQAGRAQLYADLDNAKATVKLYDVDLGASE 225

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P+AG I         +       LM I+P +   Y+ A     QI+ ++ G T ++ 
Sbjct: 226 IQAPVAGKIGSLAVR-LGSRVSPQTRLMAIIPKNS-LYVEANFKETQIEKMRVGQTVSLV 283

Query: 352 FPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEV--ILKITDLAFSDNNIEL 405
              Y  +  +     +E   P      S    +  T  + +V   + +         I+L
Sbjct: 284 LDAYPSLTYR---GKVESFAPASGATFSMMPPDNATGNFNKVVQRIPVRISILPHPQIDL 340

Query: 406 R-NGFPAEV 413
              G   E 
Sbjct: 341 IKPGMSVEA 349


>gi|75908466|ref|YP_322762.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75702191|gb|ABA21867.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 399

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 117/340 (34%), Gaps = 47/340 (13%)

Query: 42  ISVSSSGEILNEDNVVEI---KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            ++++ G I  +  VV++   ++  S  I +  V+ G +I +G  +   ++ +T      
Sbjct: 60  KAITALGRIEPQGEVVQVSVSQTAGSNRIAELLVKQGDRINKGQIIAILDNRDTR----- 114

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                                          A    ++Q+     +     +      I+
Sbjct: 115 -----------------------------LAALNRAKQQVAVAQSQLAQVKAGAKQGEIA 145

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +    +      +R     R+        L A + + Q +    ++L    AVS +  + 
Sbjct: 146 AQQAIIAELAAELRQEVAARV---ATVRRLEAEVRNAQVEYQRYQSLQADGAVSVSMRDS 202

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           ++  +  +   LRE +  +      + E   +A        +    D++  Q       +
Sbjct: 203 KKLTLETTEESLREALANRSQTSETVQERLRQAKATLNRIAEVRPTDVQAAQAEVESAKA 262

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            +   +   +   + SP AG I   ++ + +      + +++I   +   Y+ A+V    
Sbjct: 263 AVQEAQANLDLTYVKSPKAGQI--LKTHTLAGEVVSDKGIVEIG-QTNQMYVVAEVYEVD 319

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           I  VK G  ATV           +    +E I  +I+++D
Sbjct: 320 INRVKVGQRATVT----QLNLPGELTGTVEDIGLLIAKKD 355


>gi|325295051|ref|YP_004281565.1| secretion protein HlyD family protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065499|gb|ADY73506.1| secretion protein HlyD family protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 422

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 56/381 (14%), Positives = 123/381 (32%), Gaps = 41/381 (10%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I K   +    + +  PL   +D        L +  ++ L+  +++ K     L+ K
Sbjct: 51  SGKIVKLFKKEYESVSKEEPLFKVDD-------SLYRKDVEILKAKLESLKQKKKELSEK 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              L++   +  +   + L       +++    +               S+      LE 
Sbjct: 104 LSRLKEQLPADVKISKENLKALEKKLNQLKYQELMEKTNYETSTQKAESSLKAAEKGLEA 163

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH-------- 235
                +   +  +      K L++K  +S+  L + E    ++  +L             
Sbjct: 164 ----AKVSFNHWKNQYNRYKRLYKKRIISKEQLEEVELAYKEALYKLESAKARLQAAKGD 219

Query: 236 ----------------EQKNMLRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEM 277
                           +Q+ +   I  L ++  +  AN  K  E+S  + Q +       
Sbjct: 220 LENAKSLKNRIAIIRKQQEEVKNKIEALKEQVKISKANLKKINELSHSIRQLEEDIKSIE 279

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           S++   +       + SP+ G I   +     ++     P+  I  +SK  ++ A +   
Sbjct: 280 SQIEKAKILLSHTLVKSPVEGFIAK-KWKEEGDFISPGLPVYSIY-NSKSFFVLAWIEED 337

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITD 395
           +I+ +K G    V         + K  +I      I S    +    EY +V   + +  
Sbjct: 338 KIKDIKVGNKVKVELEVCKKTFKGKVYSIGTSAGSIFSLIPRDTSQGEYTKVTQRIPVKI 397

Query: 396 LAFSDNNIELRNGFPAEVLFT 416
                  + ++ G    V   
Sbjct: 398 KVEKVPPVCIKPGTNVTVYIK 418


>gi|300855404|ref|YP_003780388.1| putative transporter protein [Clostridium ljungdahlii DSM 13528]
 gi|300435519|gb|ADK15286.1| predicted transporter protein [Clostridium ljungdahlii DSM 13528]
          Length = 248

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 82/206 (39%), Gaps = 17/206 (8%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
              VS+    +  + V    + ++ +  + ++ +       +      ++     + ++ 
Sbjct: 57  SGRVSEMS-TELGKKVNLGDVVIKLDTSDLQSKVDQAKSAVNAVQTNLSSAATSTASNIS 115

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q Q   A   ++L   E + +  +I +PI+G +         +     +PL+ IV ++  
Sbjct: 116 QYQSELAQAQAQLKTSEASLKDASITAPISGIVSSQNIN-VGDMVIPGKPLISIV-NADN 173

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
            Y+   V    +  ++ G +  ++ P  +D R   F   I  I+  ++ Q  +       
Sbjct: 174 LYVNVYVPINVLNQIQVGQSVVIKVPDISDNR---FLGKIAVINSKVNSQSQD------- 223

Query: 388 EVILKITDLAFSDNNIELRNGFPAEV 413
            V++K+T    +  N  L+ G  AEV
Sbjct: 224 -VLVKVT---LNSKNGLLKPGMFAEV 245



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/119 (10%), Positives = 48/119 (40%), Gaps = 10/119 (8%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +  ++ V+I S  SG + +   E G ++  G  ++  +  +    +D  K ++  ++ ++
Sbjct: 44  IATNDSVDITSNISGRVSEMSTELGKKVNLGDVVIKLDTSDLQSKVDQAKSAVNAVQTNL 103

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            +  ++     ++Y          + +L     +  ++ + + +  I++    +     
Sbjct: 104 SSAATSTASNISQY----------QSELAQAQAQLKTSEASLKDASITAPISGIVSSQN 152


>gi|294792292|ref|ZP_06757440.1| heat shock protein HtpX [Veillonella sp. 6_1_27]
 gi|294457522|gb|EFG25884.1| heat shock protein HtpX [Veillonella sp. 6_1_27]
          Length = 348

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 70/413 (16%), Positives = 129/413 (31%), Gaps = 91/413 (22%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV--VEIKSPFSG--II 67
           N+      + +  +I + G+  ++       +  +S  I+ + NV   E+   F G   I
Sbjct: 16  NNRKKCAGIMIAFLIILGGVSYYAYNQY--EAYIASHHIVLQGNVNLREVNVAFRGSDRI 73

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V+ G+ + QG  L      E    +   K +I      +   ++            
Sbjct: 74  ASLLVDEGAVVSQGQILGYLHSDELNLAVQQAKATIAAQDAIVAKLQAG----------- 122

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                                          S    +     R+ S        + ++  
Sbjct: 123 -------------------------------SRPEEIAQASARVTSAEAALAQSKQEAEK 151

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L+   ++               AVS+  ++  +  V  S  +L              NE 
Sbjct: 152 LQKSYNASNG-----------KAVSRQSVDDIQAKVKVSEAKL--------------NEA 186

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
               NL  A   +E   D+ Q Q       S+L   E    Q  + +PI G I   +   
Sbjct: 187 QQAYNLAVAGPRQE---DIAQAQAQLDAMKSELARQEFLLNQTVLTAPIDGVITA-RLLQ 242

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             + A  + P+ K+   +   ++R  V  + +  +  G  A V    Y +         I
Sbjct: 243 VGDMASPNTPVFKLA-ENTKKWVRVYVNERDLGKIYNGMDANVTTDTYKNE---PIHGTI 298

Query: 368 EKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             I  +      S +  +++T   YEV + + D    DN + L  G PA V  
Sbjct: 299 GYISSVAEFTPKSVETKDVRTTLVYEVRVYVDDP---DNRLRL--GMPATVSI 346


>gi|306832258|ref|ZP_07465412.1| BlpC ABC superfamily ATP binding cassette transporter
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
 gi|304425697|gb|EFM28815.1| BlpC ABC superfamily ATP binding cassette transporter
           [Streptococcus gallolyticus subsp. gallolyticus TX20005]
          Length = 464

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 60/462 (12%), Positives = 153/462 (33%), Gaps = 44/462 (9%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSI---IGIIGLITWSILLPIEISVSSSGEILNEDNVV 57
           M+  ++++ +  H       T+L I   + +  L+ +S++   EI+V++ G I     + 
Sbjct: 1   MNPKLFQSAEFYHRRYHNFATVLVIPMTLLVFFLLAFSLIGKKEITVTTLGSIRPTKVIA 60

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            ++S  +  +    +     + +G  L+ + D      ++  +  IK      +      
Sbjct: 61  VVQSSSNNTVLTNNLSENKAVKKGDLLIQYSDKLEDSQLNAIQTQIKRYERQQEALNQLK 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + L    ++     E      ++       T +   +    SV +          +I   
Sbjct: 121 ESLKQGQNLFTGDDEFGYSATVERFLNQSQTITAQVSQSNQSVAKQEAGVNQANAAIANQ 180

Query: 178 RLDLENKSSLLRALLSSHQKD-----------------LTMMKNLFEKNAVSQNDLNQQE 220
             +L+ ++S  + +  + Q D                 L+ ++ +  +++ + N+   +E
Sbjct: 181 IANLQTQASQYQEVKDAIQTDKTNVSGNNPYATTLNSYLSQIQTINTQSSSTDNNSASKE 240

Query: 221 RIVYKSTLELRENIHEQKNMLRHIN--------------ELYDEANLEFANYLKEISRDL 266
            +  +   +L+  I      +  +                  ++        L +    L
Sbjct: 241 SVKNQFLTDLQGQIDSINASISSLQTQAASNYSTGSYDTSATNQIESLRQQELTQAETQL 300

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH-- 324
            Q  +   +  ++L     ++    + +  +G +  +  F       Q   + +I P   
Sbjct: 301 AQITQEKENLQAQLDQTNLSKADTVLKASQSGILHVSDEFEGQTLLPQGSQIAEIYPDIA 360

Query: 325 -SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            ++   IR  V    +  +KKG T  +     ++        I  KI  I S      + 
Sbjct: 361 KTQQVAIRYYVDSTHVSQLKKGQTVRLTLEKISNHAI----VITGKISKIASSATQTKEG 416

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
             +    L   D     ++ +L+ G   + + T    T    
Sbjct: 417 NVFEVTALATVD---KQDSSKLKYGLQGKTISTIGKKTFFNY 455


>gi|329119757|ref|ZP_08248436.1| auxiliary transporter [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464152|gb|EGF10458.1| auxiliary transporter [Neisseria bacilliformis ATCC BAA-1200]
          Length = 325

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 111/341 (32%), Gaps = 42/341 (12%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P S   +T  +      ++ + I        +  G++L    VV + +P +G+I +  
Sbjct: 27  SRPYSGVVLTWCAAAAASAVLLFLIFGSYTEKTTVEGQLLPVSGVVRVYAPDTGVITEKY 86

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V +  ++  G  L             +++         +  E      L           
Sbjct: 87  VGDEIKVNAGDKLFALSTSRFDGSGSIQQ--------RLAKEAVLKKTLA---------- 128

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               +Q L  L   H   ++     I+ +   L              L ++ +    +  
Sbjct: 129 ----QQELVRLKLIHDNETRSLRNTINRLNSQL--------------LYIKGQVESQKRR 170

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +    + L   + L   +A S+ +    E  + +   +L     E+  +++ I       
Sbjct: 171 VKLTGELLHKYRFLATSDAASKQEEMNAEADMLEQKAKLDAYRREEVGLMQEIKAQ---- 226

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            L  A+  +    +  Q +R  AD   ++   E  R ++ I +P +G             
Sbjct: 227 ELSAASLPQRHQTEQSQLERAIADISQEILDFE-MRSEQIIRAPRSGYAATPNV-EVGQQ 284

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
              S+ LM IVP     Y    V  K    +K G    +R+
Sbjct: 285 VDPSKLLMSIVPEHSELYANLYVPSKAAGFIKPGKKVVLRY 325


>gi|307592159|ref|YP_003899750.1| DevB family ABC exporter membrane fusion protein [Cyanothece sp.
           PCC 7822]
 gi|306985804|gb|ADN17684.1| ABC exporter membrane fusion protein, DevB family [Cyanothece sp.
           PCC 7822]
          Length = 437

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/349 (12%), Positives = 117/349 (33%), Gaps = 49/349 (14%)

Query: 44  VSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFED-IETTDLIDLK 99
           +++ G +     V+++ +P       + +  V+ G  + +G  +   ++       +   
Sbjct: 58  IAALGYLEPRGEVIKLSAPALMEGTRVDQLLVKRGDLVKKGQVIAILDNYARLQAALTQA 117

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  ++  +  +   K+            +K   + ++   +           +    I+S
Sbjct: 118 QAQVEIAQSRLAQTKAGA----------KKGEIAAQDARFEGSSAELQGQIAIQKATIAS 167

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +   LK + +            E      +A L +   D    K LFE  AVS+ + ++ 
Sbjct: 168 LEAQLKGEKSAQ----------EATIERTKAQLINADTDCKRYKMLFEDGAVSEQERDRF 217

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS- 278
                 +     E     + +   + E   EA       +  +++ +++NQ T +     
Sbjct: 218 CLQADTALATYTEAQANLERITTTLEEKITEAKANLQRTVLTLNKKIKENQATLSAVEEV 277

Query: 279 -----------------KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
                             +   +   +   + +   G I+    +        ++ ++++
Sbjct: 278 RPVDVKVAQSELISAQANVKKAKADLDLAYVRASRDGQILKIHIW-PGELVS-NEGIVEL 335

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
              +   Y+RA+V    I  V  G  AT++    ++        ++++I
Sbjct: 336 G-QTSQMYVRAEVYETDIYRVHLGQKATIK----SNGVVGILNGVVDEI 379


>gi|260892027|ref|YP_003238124.1| efflux transporter, RND family, MFP subunit [Ammonifex degensii
           KC4]
 gi|260864168|gb|ACX51274.1| efflux transporter, RND family, MFP subunit [Ammonifex degensii
           KC4]
          Length = 432

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 52/377 (13%), Positives = 110/377 (29%), Gaps = 77/377 (20%)

Query: 54  DNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
             V  ++        SG IK+     G ++  G  + T               S+  +  
Sbjct: 51  GKVKAVQEVNLLPKISGRIKEINFNLGDRVKAGQVVFTL--------------SVPEIEA 96

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            +   ++ +          E                                  SL    
Sbjct: 97  EVARAQAGVKQAQAAKAAAET---------------------------------SLAQAN 123

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            ++                 +      +++    K L ++ A+++      E+      +
Sbjct: 124 FQVEQARAALEQARTALEQAKENFRLAEENYKRGKFLLDQGAIAKATF---EQQFETPYI 180

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             + N+ + ++ L      Y +A          +   + Q Q       + L   E T  
Sbjct: 181 NAKANMEQAQSALTRAEAAYQQAVNYRDKV---VPAQIRQAQAAEEAAQAALAAAETTLA 237

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           Q  ++SPI G +V  ++             P++ I        +   V   +I  VK G 
Sbjct: 238 QAVVVSPIDGYVVA-RNAEVGELVGPQMPMPVLTIA-QLDPILVEIMVPEDKINLVKVGE 295

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              VRFP   +      +  ++ I P  + Q         Y V ++++     + +++L+
Sbjct: 296 KLAVRFPALEER---VLEGKVKYISPASNPQTKG------YTVQIELS-----NPDLKLK 341

Query: 407 NGFPAEVLFTAKNTTLA 423
            G  A V+       L 
Sbjct: 342 PGMAA-VVLLGGEKGLL 357


>gi|220914948|ref|YP_002490256.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
 gi|219952699|gb|ACL63089.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
          Length = 354

 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 48/350 (13%), Positives = 106/350 (30%), Gaps = 78/350 (22%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I    V+ G+ + +G  L + E +   D +   +      R ++D  ++     N  
Sbjct: 67  GGRIASLAVDEGATVREGQSLASLEKVYFEDAVAQARAQRDQARANLDKAQNG----NRP 122

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++ +      E +      +  S  ++      +   ++    L  +R           
Sbjct: 123 EEIAQAQASVAEREATLANARLASDRAEQLLRSGAGTTKAHDDALAALRQA--------- 173

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L+S ++ L +M+                            E+I   +  L +
Sbjct: 174 -----DAQLNSARQYLALMR-----------------------AGARAEDIAAARAQLAN 205

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                                 L   QR  AD                +++P  GT++  
Sbjct: 206 SEAA------------------LAVAQRQLAD--------------AELVAPTDGTVLS- 232

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +   +       + +  ++  +   ++R+ V+   +  V+ G  AT+R           F
Sbjct: 233 RVRETGAIVNAGETVF-VLSLTNPVWVRSYVSQVDLGRVRPGQMATIRI---DTPGAPTF 288

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           K  +  I          ++T+E    ++    +   D    LR G P  +
Sbjct: 289 KGWVGFISTTAEFTPKTVETRELRTALVYRIRVVAEDPRGVLRQGMPVTI 338


>gi|291279966|ref|YP_003496801.1| hypothetical protein DEFDS_1587 [Deferribacter desulfuricans SSM1]
 gi|290754668|dbj|BAI81045.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 391

 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 62/383 (16%), Positives = 135/383 (35%), Gaps = 44/383 (11%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E ++V+I     G + K   + G  + +G  L   +  E  + ++  K     +   I  
Sbjct: 37  EADIVDISPKIPGEVIKVYFDEGDSVKKGDLLAEIDRRELLEKLNQLKSQKNQITNLIKA 96

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           +   L  L  K++      E  E++L                        ++K+    + 
Sbjct: 97  KTKELQSLKIKHEQTNIKKEKAEKELSI----------------------AIKVAENNLN 134

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ------------- 219
                   +ENK S+ +  L   + DL+  K L+ +  +S++   +              
Sbjct: 135 IAKEKISIIENKISVAKQQLQKIKNDLSRYKKLYNEGGISKSKFEEISLKFEEIDKQYNT 194

Query: 220 ---ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              E+ V  +  E  +   E   +      + ++  +     +     +L+  +    + 
Sbjct: 195 LLKEKDVAINNYENAKKNLENTKLKDKDISILEKELMNIKTAISAKEYELDITKNRLNEI 254

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
              ++  +   +   I SPI G I+  +S      A     L  I    +  Y +     
Sbjct: 255 NHIISQTKIKLDDTFIKSPINGIIMT-KSIEEGEIATNLTTLFSIY-DPEKIYFKGYFPE 312

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           K +  +K G  A+V    + D ++K FKA+I  I          +Q+++     +     
Sbjct: 313 KYLSKIKIGDKASV----FIDGQDKPFKAVISYISSKAEFTPKEIQSKDERVKQVFAIKA 368

Query: 397 AFSDNNIELRNGFPAEVLFTAKN 419
            F +++  L+ G PA+++   + 
Sbjct: 369 YFENSSEYLKPGMPADLIINLEK 391


>gi|258592874|emb|CBE69183.1| Secretion protein HlyD precursor [NC10 bacterium 'Dutch sediment']
          Length = 351

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 52/376 (13%), Positives = 122/376 (32%), Gaps = 80/376 (21%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + ++G I   +  VE+ S   G + +  V+ G Q+     +                  
Sbjct: 36  VLVANGTIEATE--VEVSSKLPGRLAQLLVKEGDQVQANQVI------------------ 75

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
                  +DT +   +    +  +     + +E                           
Sbjct: 76  -----ARLDTSEIEAEVTQAQAALAMAGAQLKE--------------------------- 103

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
              +  +R++ I   R +L+     L+      + +     NLF++ A+S      QER 
Sbjct: 104 --LLAGSRLQEIEEARANLQQAEDNLK----LAKDEWDRFDNLFKEGAIS-----AQERD 152

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
             K+ +E+             +    +   L       E    +E  +       + L +
Sbjct: 153 QAKNKVEVAS---------SQVRATRERYELVRVGPRPET---IEAARHERDRAKATLGM 200

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +      TIL+P+   ++  ++           P++ I+      ++R  +   +I  V
Sbjct: 201 AQVRLRDSTILAPLTAIVLTKRA-EQGEVVNPGFPIV-ILIDPDDLWLRVYIPESEIGLV 258

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             G  A+V    + + R   F+  + +I          +QT++    ++    +  +++ 
Sbjct: 259 SIGQEASVAVDSFPNRR---FEGKVVEISSKAEFTPRTVQTKKERVNLVFGVKIRLNNHE 315

Query: 403 IELRNGFPAEVLFTAK 418
             L++G PA+      
Sbjct: 316 RLLKSGMPADAEIKTG 331


>gi|186683741|ref|YP_001866937.1| carbamoyl-phosphate synthase L chain, ATP-binding [Nostoc
           punctiforme PCC 73102]
 gi|186466193|gb|ACC81994.1| Carbamoyl-phosphate synthase L chain, ATP-binding [Nostoc
           punctiforme PCC 73102]
          Length = 435

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 47/398 (11%), Positives = 123/398 (30%), Gaps = 71/398 (17%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWS----------------ILLPIEISVSSSGEILNE 53
            +N   S   + +++ + I G+  ++                 + P+  +V++ G +  +
Sbjct: 13  SQNLVRSPVLLAIITSLAIGGISVYAVMKLQATANEKQKTSVAIQPVVKTVTALGRLEPK 72

Query: 54  DNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLIDLKKVSIKNLRCH 109
             V+++ +P       +++  V+ G  I  G  +   ++       +   +  +K  +  
Sbjct: 73  GEVIKLSAPSSNEGNRVEQLLVKEGDAIKAGQVVAIMDNRDRLQATLGEAEKQVKVAKSR 132

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           ++  K+                          +G   +T +++       +         
Sbjct: 133 LNQVKAGAK--------------------QGEIGARQATVNRLQVELEGDIKTQQATINR 172

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE--------- 220
               +   +  L+   + + A   + Q ++   + L++  A+S  +++ +          
Sbjct: 173 IEAELLGQQRSLQATVARVAAERRNAQAEVQRYETLYKAGAISSQEVDSRRLSAETSTQA 232

Query: 221 ---------RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
                    R V     +L E    Q   L  + +  +EA        +    D+   Q 
Sbjct: 233 LIESQATQTRTVATLQQQLNEAKANQDKTLASLQQQINEAKANLNQTAEVRPTDIANAQA 292

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF---SSS--NYAQQSQPLMKIVPHSK 326
                 + +  ++    Q  I++P AG I+   +    +          Q          
Sbjct: 293 EIESAQATVEKIKAELAQAYIVAPKAGRILEINTRAGETVGDEGIVALGQT--------D 344

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             Y   +V    I+ V+ G    V      +  E +  
Sbjct: 345 QMYAVVEVYQSDIKRVRPGQDVRVSSDSLRNELEGRVD 382


>gi|161521224|ref|YP_001584651.1| secretion protein HlyD family protein [Burkholderia multivorans
           ATCC 17616]
 gi|189352601|ref|YP_001948228.1| multidrug resistance protein A [Burkholderia multivorans ATCC
           17616]
 gi|160345274|gb|ABX18359.1| secretion protein HlyD family protein [Burkholderia multivorans
           ATCC 17616]
 gi|189336623|dbj|BAG45692.1| multidrug resistance protein A [Burkholderia multivorans ATCC
           17616]
          Length = 372

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/365 (9%), Positives = 89/365 (24%), Gaps = 86/365 (23%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V +   +  G PL+  +              ++  R  +D   + +D      
Sbjct: 76  GYVTDVYVRDNQPVKAGDPLVRLD--------------VRPYRVALDQANATVD------ 115

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                             +    +      +     N    + +
Sbjct: 116 ----------------------------------ARRADIARAQAEISQQRANLEQAQAQ 141

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + + +        +      L    A +   + + +    ++   L  N          I
Sbjct: 142 AKVSQINARHASDEYARYAPLAATGAETHERVAELKSARDQALATLAANDAAIAAARTQI 201

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                                L+Q +       +         +   + + + G +  ++
Sbjct: 202 AS---------------FGAQLQQARAQLEAAQASAAQSRLDLDNTIVRATLDGRV-GDR 245

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     Y Q    L+ +VP   +  + A     QI  ++ G    +      D       
Sbjct: 246 TVRVGQYVQPGTRLLTVVPVDAIYLV-ANFKETQIGRMRVGQPVELHVDALPDDT---LS 301

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDNNIELRNGFPAEVL 414
            +++   P    Q         T  + +      V ++I     + +   L  G    V 
Sbjct: 302 GVVDSFAPGTGAQFALLPPENATGNFTKIVQRVPVRIRIAPNERARH--MLLPGLSVTVD 359

Query: 415 FTAKN 419
              ++
Sbjct: 360 VDTRS 364


>gi|39937165|ref|NP_949441.1| hlyD family multidrug secretion protein [Rhodopseudomonas palustris
           CGA009]
 gi|39651023|emb|CAE29546.1| putative hlyD family multidrug secretion protein [Rhodopseudomonas
           palustris CGA009]
          Length = 404

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 88/302 (29%), Gaps = 28/302 (9%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            V++    +  +QL     + +    +     +             +   Y        +
Sbjct: 102 PVVQNQTIAAGDQLAKIDDRSYRVRVEQAKAQLDQARAGKARAEAELNRQYAQIEQANAQ 161

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  L+  +  +   + L    A +    +Q      ++  ++  N  + ++  R +
Sbjct: 162 LGQSEVSLAFAENQVARYRPLAASGAEATERYDQIRNQRDQARAQVALNNAQVESARRMV 221

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             +  +     A   +                 ++L   +   +   ++SPIAG +    
Sbjct: 222 PSIEAQIAEAQAAIEQ---------------AEAQLHQAQIDLDNTVVVSPIAGRVGDLT 266

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     + Q    +M +VP     Y+ A     QI  ++ G  AT+      + +     
Sbjct: 267 AR-VGQFVQPGMRMMTVVPLHD-LYLEANYKETQIGLMRVGQPATIEVDALPNEK---LH 321

Query: 365 AIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             +    P        +  Q      T+    V ++I   A  +    L  G    V   
Sbjct: 322 GEVLSFSPGTGSEFSLLPPQNATGNFTKVVQRVPVRIRIDAGPEARKVLVPGLSIVVDVD 381

Query: 417 AK 418
            +
Sbjct: 382 TR 383



 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 40/134 (29%), Gaps = 9/134 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V     I  G  L   +D          +V ++  +  +D  ++       +
Sbjct: 95  SGYLVGVPVVQNQTIAAGDQLAKIDD-------RSYRVRVEQAKAQLDQARAGKARAEAE 147

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +      E    QL           ++V  Y    +  S      R   I   R     
Sbjct: 148 LNRQYAQIEQANAQLGQSEVSLAFAENQVARYR--PLAASGAEATERYDQIRNQRDQARA 205

Query: 184 KSSLLRALLSSHQK 197
           + +L  A + S ++
Sbjct: 206 QVALNNAQVESARR 219


>gi|67923634|ref|ZP_00517104.1| Secretion protein HlyD [Crocosphaera watsonii WH 8501]
 gi|67854516|gb|EAM49805.1| Secretion protein HlyD [Crocosphaera watsonii WH 8501]
          Length = 489

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 51/389 (13%), Positives = 117/389 (30%), Gaps = 35/389 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + + +SG +   ++V  I     G + + +VE G ++ QG  L   E  E        
Sbjct: 56  LSVDIEASGVVEPIESV-NISPKNPGRLVQLRVEQGMRVKQGQILALMEHSENKARGKFA 114

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV-FNYGIS 158
           +         ++  K  +              E R+ ++     +      K      + 
Sbjct: 115 EARYNQALADLEGAKVRIPS------------EIRQAEIRYIQAQSKLEQRKANLKRAVE 162

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            + R +     ++ S         ++    + LL            L      +Q +L +
Sbjct: 163 RIPRDIDQIKAQIVSARSGLQLAASRVKRNQELLEEGAITQDRFDELLNNYNNAQANLIE 222

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E  + ++       I + K  + H      E  ++     +  + D+   +       +
Sbjct: 223 LETRLDQANNTQNPEIDQLKQEVIHAEATLLETQVQLEERKRTATMDIASLELAAEAAKA 282

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--------KLTYI 330
           +L       +   I +P  G +    +     +   +         +        +   I
Sbjct: 283 ELEEEVIQFQDTAIRAPFDGIVTQKYAN-PGAFVTPTTSASSTASATSSSIIALARGLKI 341

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            AKV    I  +K+G    +    + +     F+  +  I P    + N       +EV 
Sbjct: 342 VAKVPEVDIAMIKQGQPVMITADAFPNQ---VFEGQVVLIAPEAVVEANVTS----FEVT 394

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +     A      +L +    +V F  + 
Sbjct: 395 I-----ALRTGEDKLLSRMNVDVNFLGQE 418


>gi|300777249|ref|ZP_07087107.1| possible multidrug resistance efflux pump [Chryseobacterium gleum
           ATCC 35910]
 gi|300502759|gb|EFK33899.1| possible multidrug resistance efflux pump [Chryseobacterium gleum
           ATCC 35910]
          Length = 386

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 53/360 (14%), Positives = 113/360 (31%), Gaps = 70/360 (19%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I + +      + +G  LL  +D E    +   + +  +     +   S++    N    
Sbjct: 87  ITEIRFVEHQYVKKGDTLLILDDREIQTQLGQAEATYMSALASKNATSSSVKTATN---- 142

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                                       + ++  N    +    
Sbjct: 143 -------------------------------------------NVNTVGANVQAAKANIE 159

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +A L + +++    KNL    AV++   +Q +        +L   I + ++++     
Sbjct: 160 ATKARLWNAEQNFNRYKNLLADEAVTRQQFDQIKTDFEAQKAQLEAQISQYQSVINSKTT 219

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                N        E+   L  N        S L + +       I +P  G I+  ++ 
Sbjct: 220 SELSVN--------EVQSRLGMNDADIKRTQSALDMAKLNLSYTVITAPHDG-IMGRRTV 270

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +       SQ +  IV  +   ++ A    KQ+ +V+ G  A ++         K+F+  
Sbjct: 271 NVGQLLNPSQQVGTIVDINN-IWVTANYREKQMGNVQIGGLAKIQVDALG---GKEFEGK 326

Query: 367 IEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           I  +           P+ +   N ++ Q+   V ++ TD    ++   LR G   EV   
Sbjct: 327 ITAVSGATGARYAAVPVDNSTGNFVKVQQRIPVRIEFTDKNKPEDLKLLRAGMNVEVNLK 386


>gi|312127437|ref|YP_003992311.1| secretion protein hlyd family protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777456|gb|ADQ06942.1| secretion protein HlyD family protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 365

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 66/400 (16%), Positives = 131/400 (32%), Gaps = 45/400 (11%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           K + LLS   I               + SS     E   ++I S  +G ++K  VE GS+
Sbjct: 9   KLVLLLSFCIIFLFFLTGCKAKNGEDIYSS---TVEVKSIDINSEIAGRVEKVYVEEGSK 65

Query: 78  ILQGTPLLTFED--IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           + +G  ++  +   +E    + L  + I  +   I  E   +  L               
Sbjct: 66  VKKGDVIVKLDSGILEIQKNLSLYNLEIAKISSKIAKENLEIAKL--------------- 110

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                   KY     K   Y +  +  S+    T       N   L      L+A+  S+
Sbjct: 111 --------KYALMNKKPSKYQLEQLKESIFQLQTLKEGNAKNISLLRQAIEDLKAVRVSN 162

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            + L  +  L       +  LN  E        ++     E +  +     +  E    +
Sbjct: 163 TEMLKTLTEL-------KIQLNSLEAQNESVAHQINSL--EVQLQMVKNETVMPEDKSIY 213

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  ++   ++  Q           L + E+  ++ +I+SP  G I   +      +    
Sbjct: 214 AISVEIAQKNYSQALEYVKIAEGNLKLCEENLKKASIISPADGII-SIKGVEEGQFIGPG 272

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             + +I       Y++  V   ++  VK G   ++          +K    I  I     
Sbjct: 273 SFVAQI--SLDYYYLKIYVPSTELGKVKIGKEVSI-----VSEDGQKAYGKIVYISDKAE 325

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               N++T+E  + ++ +  +  + N   L+ G    V+ 
Sbjct: 326 FTPRNVETKEEKQKMVFMVKIDVTKNKEILKPGMIVNVIL 365


>gi|302338276|ref|YP_003803482.1| efflux transporter RND family, MFP subunit [Spirochaeta smaragdinae
           DSM 11293]
 gi|301635461|gb|ADK80888.1| efflux transporter, RND family, MFP subunit [Spirochaeta
           smaragdinae DSM 11293]
          Length = 450

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 43/361 (11%), Positives = 110/361 (30%), Gaps = 52/361 (14%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S   G + +  V+ G ++ +G  L   +  E        +  I +    ++  +  L+
Sbjct: 68  VSSLVEGTVVRLLVDEGDRVTKGELLALIDTEELDIKQSEAEAEIVSAEAAVELARQQLE 127

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                                                 I + + S+K    ++  +    
Sbjct: 128 D---------------------------------GKKQIEAKFISIKNAEAKIEQLKAEL 154

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             +       + L          +++L  +   ++ +L   E  +    +  R +I   +
Sbjct: 155 EQVSRNYENKKQLFEIEGVTAEELQSLLVQKKSAETELFTAEGELAIQNIGFR-DIDITQ 213

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             L    E  +   +      + +  +L   +       S L  +     +  I +PI G
Sbjct: 214 AGLSVPQEEEERIKVLIEVNTRTLQAELTVAEARLHAARSNLQSVNLLISRSEIRAPIQG 273

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            I     +     A    PL  I        ++A++  ++ + ++KG    +R    +D+
Sbjct: 274 VIAAKNIY-LGEKASTETPLFTIF-SQNALIVQAEIPEQETRLIQKGQRVEIR----SDL 327

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            ++ +   +  I P  + +             +++ D++       LR G    +     
Sbjct: 328 SDRCYTGTLYFIAPYTNAESRTTA------AKIRLDDVS------SLRPGMFVRLTIETG 375

Query: 419 N 419
            
Sbjct: 376 E 376


>gi|188589008|ref|YP_001921941.1| putative HylD family protein [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188499289|gb|ACD52425.1| efflux transporter, RND family, MFP subunit [Clostridium botulinum
           E3 str. Alaska E43]
          Length = 482

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 65/423 (15%), Positives = 142/423 (33%), Gaps = 88/423 (20%)

Query: 20  MTLLSIIGIIGLITWSILLP-------------IEISVSSSGEILNEDNVVEIKSPFSGI 66
           + +L I+GI G   +S   P             I  S++  GE+   +N   + +    I
Sbjct: 35  VAILVIVGI-GFKMFSSKAPNMQAQNTILNKTNIVNSINVLGEVK-SENSTNVYTNSGNI 92

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K+ +V+ G ++  G  L   +  +  + I+    ++                 N K D+
Sbjct: 93  VKEVKVKVGDEVKTGDVLAILDTEKLKEEIEQLTETLSASEA------------NGKLDL 140

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                +  + ++  +     +L   L          ++  +   
Sbjct: 141 --------------------DSKKRAYDNIVYINENNLNTDL----------INANSMLE 170

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +  L   ++     K +     +S  +  + E    K+  +  +   E +N    I E
Sbjct: 171 TAKMTLEDAERLYQYNKTILGYGEISNQEFKKSENDYNKAKDDYNKANVELENSKLKIQE 230

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                +L+ A    E ++   +N+       +K    +K  ++ TI +P+ GTI    + 
Sbjct: 231 -----DLKNAQNSYESAKIAYENKSERVALENK----KKELDECTIKAPVDGTITTVNAT 281

Query: 307 SSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                   S   L KI        I+A +    I ++K G    ++     D+   +   
Sbjct: 282 ----VGNPSTGTLFKI-EDLNNLIIKASIKEVDIANIKVGQKTIIKTDATDDL---ELLG 333

Query: 366 IIEKIDPIISQQDNNL--------QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            I +I P     +  +             +E  +KI ++   + NI++  G  A++    
Sbjct: 334 EISEISPTAKVDEPTVPTGNSTANSGDVIFEAKVKINEM---NENIKI--GMKAKLNIIL 388

Query: 418 KNT 420
           +  
Sbjct: 389 EEK 391


>gi|255035787|ref|YP_003086408.1| secretion protein HlyD family protein [Dyadobacter fermentans DSM
           18053]
 gi|254948543|gb|ACT93243.1| secretion protein HlyD family protein [Dyadobacter fermentans DSM
           18053]
          Length = 366

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 49/419 (11%), Positives = 121/419 (28%), Gaps = 94/419 (22%)

Query: 19  RMTLLSIIGIIGLITWSIL-------------LPIEISVSSSGEILNEDNVVEIKSPFSG 65
           R  ++  + IIG  TW                  I+             ++  +    SG
Sbjct: 17  RFLIILAVLIIGGGTWGFTKYNHGLHHEETDDAQID------------SDISPVIPRISG 64

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + + +V++   + +G  L+  ++         + + ++  +  +   + +L   N   +
Sbjct: 65  YVTEIRVKDNQTVKKGDTLIVLDN-------RDQIIKLEQAKAGLLGSQGSLTVANETTN 117

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
               +  + E  +     +       ++                                
Sbjct: 118 ASAASGITYEANIAVVAAQIEEAKVNLWRA------------------------------ 147

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                      +D    +NL + ++++Q +  Q +    K+   L   + ++    R   
Sbjct: 148 ----------NQDFARYENLIKDHSITQQEFEQAQATKQKAERALAVLVAQKGAAERQAK 197

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               +            S              +++   E       I +P  G +    +
Sbjct: 198 AAGRQTKA--------TSVQTAVANANIKARQAEIANAELNLSYTVITAPTDGRVSKVNA 249

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                + Q  Q L  I+   K  ++ A     Q+  +K G    +    Y +    +F+A
Sbjct: 250 -QLGQFLQAGQSLFSIISTHKP-WVTANFKETQLTKMKIGQHVKIHVDAYPEH---EFEA 304

Query: 366 IIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNI-ELRNGFPAEVLF 415
            +    P    +      +  +  + +V+    ++I      D  I +LR G    V  
Sbjct: 305 QVASFSPATGARFALLPPDNASGNFVKVVQRLPVRIEFTKADDEKIAQLRPGMNVFVDV 363


>gi|87310141|ref|ZP_01092273.1| hypothetical protein DSM3645_13755 [Blastopirellula marina DSM
           3645]
 gi|87287131|gb|EAQ79033.1| hypothetical protein DSM3645_13755 [Blastopirellula marina DSM
           3645]
          Length = 561

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 55/391 (14%), Positives = 131/391 (33%), Gaps = 69/391 (17%)

Query: 44  VSSSGEILNEDNVVE---IKSPFSGIIKKFQ--VENGSQILQGTPLLTFEDIETTDLIDL 98
           V   GE+ +  NV     ++S  +    +    +E G+ + +G  L+  +     +   L
Sbjct: 69  VVERGEVESASNVEVKSEVRSYRTTNSFEILWAIEEGASVKKGDLLIRLDSSALEEEHTL 128

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           +++ +      +   ++ L                                         
Sbjct: 129 QQLDVTQSIASLAKAENELAA--------------------------------------- 149

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                + M    + +      ++E++ +L    +   ++ L     L  K  V+   L  
Sbjct: 150 ---AEIGMNEYVLGTFVEEMNEIESEITLAEENVRRAEEYLLYSGRLAAKGYVTSLQLQG 206

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  + K+ +EL ++  ++  +  +  E   +   E  + +K    DLE  +     E  
Sbjct: 207 DQFALKKAKIELEKSQTKKNVLKEYTKEKKIK---ELDSAIKVAEADLEAAKEKLGLENK 263

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFS----------SSNYAQQSQPLMKIVPHSKLT 328
            L   E+      I +P  G +VY    S               ++ Q L+++ P  +  
Sbjct: 264 MLQFFEEQISACEIRAPQNGQVVYANVSSGRDSSDFVLEPGAKVRERQTLIRL-PDYEAM 322

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            I   V   +I  + K   AT++   Y      +    + +++   +       + + Y 
Sbjct: 323 QIVCDVNESRIALIDKEMPATIKLDAYEGS---ELMGEVIRVNEYPTPGHWMSSSVKKYA 379

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           V +K+      +  +++R G  A+V    ++
Sbjct: 380 VTVKV-----LNPTMQIRPGLTAQVSIHVES 405


>gi|300868382|ref|ZP_07113007.1| putative chromosome segregation ATPase-like protein [Oscillatoria
           sp. PCC 6506]
 gi|300333600|emb|CBN58195.1| putative chromosome segregation ATPase-like protein [Oscillatoria
           sp. PCC 6506]
          Length = 606

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 76/478 (15%), Positives = 136/478 (28%), Gaps = 125/478 (26%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     +++L  + I+GL  WSI   I I++   G  +    VV+ +SP SG +K   V+
Sbjct: 35  PKEWVPLSVLGGLVIVGL-AWSIFGKIPITIDGRGIFIAPRQVVDFQSPISGQLKTLYVQ 93

Query: 74  NGSQILQGTPLLTFEDIE-----------------------------TTDLIDLKKVSIK 104
            G  I +   L T +  E                             T    D    S  
Sbjct: 94  AGQCIAKNERLATIDPSELKQRLKLAQDKQAQLQQQSNETSLLLNQGTRSEQDAIIASKI 153

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           +L+  +   +S    L NK      A   + + L   L         + + G+ ++ R  
Sbjct: 154 SLQQRLLAAQSMTPMLQNKGL---DAIAQQRQSLQQRLQDLQQMTPLIQSKGLDAIVRQR 210

Query: 165 KMKLTRMRS---------------IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +    ++R                I   R  L+ +    + L     + L   + LF + 
Sbjct: 211 QSIQQQLRDTKSLTPTLKEKGLNTITEQRQSLQQRLENAKKLAPVLAERLEKRRQLFSEG 270

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNM----------------------------- 240
           A+ Q+ L + E+  ++    + E   E K++                             
Sbjct: 271 AIPQDTLLEAEQEYFQKLESVAELKAELKDLDAREVEAQQQYLENLNQIGALQAKLKDID 330

Query: 241 -------------LRHINELYDEA------NLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                        L  INE+  +         E      E    + Q Q    +  +K  
Sbjct: 331 VQEATTQQQYLNSLNQINEIQAQLKDLEVKETESQQRHLENLNQIRQTQADLQELETKAK 390

Query: 282 ILEKT--------------------------REQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            LE+                            +   I SP AG I+   + +        
Sbjct: 391 RLEQDNLEQLNNKQNPIQDVRREIAQLQQQIIDNSEIRSPHAGCILEIMA-TEGQVVSPG 449

Query: 316 QPL--MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
             L  + +          +  T K  + VK G    +        R       +  + 
Sbjct: 450 TNLGSLNVTSRKGTIVGVSYFTVKDGKKVKPGMMIQITPDTVKRQRYGGIVGTVTSVS 507


>gi|86359889|ref|YP_471779.1| multidrug efflux transporter protein [Rhizobium etli CFN 42]
 gi|86283991|gb|ABC93052.1| multidrug efflux transporter protein [Rhizobium etli CFN 42]
          Length = 394

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 53/375 (14%), Positives = 110/375 (29%), Gaps = 83/375 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +   +    SG I +  V +   +  G PL   +D              ++ R  +D
Sbjct: 89  VKADNTTVAPKVSGYIAEVLVGDNQVVKAGQPLARIDD--------------RDFRAALD 134

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH-STCSKVFNYGISSVYRSLKMKLTR 170
             K+ +       +  + + + ++  +      +     ++ F    +  Y         
Sbjct: 135 QAKADVAAAEATLNAKQASLDIQQSTIAAARATFEVDKANETFAEQNNKRYA-------- 186

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
                                            NL            Q    +  +   +
Sbjct: 187 ---------------------------------NLATNGYAPVQTAQQAASAIAAAQATI 213

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +       ++ ++ L               + +L Q + T A + +     E      
Sbjct: 214 VRDNAALDAAVKQVDLL---------------NAELAQAKATLAHDQAVQRQAELNLSYA 258

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           TI +P+ GTI  N++     Y Q    LM +VP S +  I A     Q+  V+ G    +
Sbjct: 259 TITAPVDGTI-GNRALRVGQYVQAGTQLMSVVPTSAVYVI-ANYKETQLTDVRAGQPVDI 316

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDN---NI 403
               Y     +     ++ + P   Q+      +  T  + +V+ +I      D    N 
Sbjct: 317 EVDTYPGRTYR---GHVDSLAPASGQEFALLPPDNATGNFTKVVQRIPVKIVLDGEAANG 373

Query: 404 ELRNGFPAEVLFTAK 418
           +LR G   +     K
Sbjct: 374 DLRPGMSVQPSIDTK 388


>gi|312884062|ref|ZP_07743776.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368281|gb|EFP95819.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 334

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 90/286 (31%), Gaps = 24/286 (8%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     +      K+    ++             +       +  +K S  +A       
Sbjct: 69  LAVLDDRELLIKEKLAEATLAQNQAEESNANAAYKMQQSTIQEYTSKVSSAKAQYDYSLS 128

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                + L ++N VS+ D          S    + +  +       +    D+       
Sbjct: 129 QYHRFQALEKQNYVSKGD-------RDNSAAAYKVDEAQYVEAKASLKTQQDK------- 174

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L  +   ++Q +       + L+ ++       I++PI GT+      +     Q  Q 
Sbjct: 175 -LSVLDSQIKQAEAMLKQAKANLSQIQLELSYTQIIAPIDGTVTNRSMQT-GMMVQPGQA 232

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++ IV  +   +IRA     Q   + KG    V+   Y +   K FKA I+ + P     
Sbjct: 233 IVSIV-SNNPPWIRANFKETQKARMHKGQAVEVKIDAYPN---KVFKAKIDSMSPATGAT 288

Query: 378 ----DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                    T  + +V+ ++         + + NG  A V    + 
Sbjct: 289 FALLPPENATGNFTKVVQRVPVKITFTEPVNIDNGLSAVVTVDTRE 334


>gi|218689327|ref|YP_002397539.1| putative HlyD family secretion protein [Escherichia coli ED1a]
 gi|218426891|emb|CAR07746.2| Putative HlyD family secretion protein [Escherichia coli ED1a]
          Length = 343

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 53/408 (12%), Positives = 121/408 (29%), Gaps = 99/408 (24%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQVENG 75
           + + G++  I W           S G  +          N+  + S  SG I   +V + 
Sbjct: 17  ILLAGVVFFIWW----------VSKGRFIQTTDDAYIGGNITTVASKVSGYISAIEVRDN 66

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +L  +D +    +   +  IK+ + ++++ ++ +                  
Sbjct: 67  QSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLESIQATIAM---------------- 110

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                  S+ +S       ++     RL    +   L    +  
Sbjct: 111 ---------------------QQSIIQSASETWQAVKHEEQKRLRDTERYEKLAQSAAIS 149

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+ +   +            +  +ER      L  ++ +        ++    +E     
Sbjct: 150 QQIIDNAR-------FDYQQVAAKERKAANDFLVEKQRLAVLSAQEENVRTSIEEVQAAL 202

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L ++                         E   + +PI G +    + +  ++ +  
Sbjct: 203 TQALLDL-------------------------EYTLVRAPIDGIVANRSAHT-GSWVEGG 236

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             L+ +VP S+  ++ A     QI  +K G  A +R      ++ + F   IE + P   
Sbjct: 237 TSLVSLVPVSE-LWVDANYKENQIAGMKPGMKAEIRA---DILKGEVFHGHIESLSPATG 292

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   +      T+    V ++I      +    LR G    V  
Sbjct: 293 ASFSLIPIENATGNFTKIVQRVPVRIAFDDAKELKQLLRPGLSVTVSV 340


>gi|255010779|ref|ZP_05282905.1| putative multidrug resistance protein [Bacteroides fragilis 3_1_12]
 gi|313148584|ref|ZP_07810777.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313137351|gb|EFR54711.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 355

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 113/359 (31%), Gaps = 87/359 (24%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNK 123
           G IK+ +      +  G  LL  +D              +  R  + D E + +D L ++
Sbjct: 67  GYIKEVRFTEHQYVRAGDTLLILDD--------------REYRIRLKDAEAALMDALGSR 112

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                      +V N GI              R+  +N    + 
Sbjct: 113 ---------------------------EVLNSGI--------------RTSGVNIAVQDA 131

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +  +A LS  + +L     L +K A+SQ D    +     +       + +++     
Sbjct: 132 NIAETQARLSQQEAELNRYTRLLKKQAISQQDYELAKANFEATRARYNALLRQKEAAQSQ 191

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            +E    +    AN L++                +++ + +       + +P  G +   
Sbjct: 192 YSETSKRSTSAEANILRK---------------EAEVDMAKLNLSYTVVTAPYDGYM-GR 235

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     + Q  Q L  +V  +   ++ A     QI H+  G    ++   ++      F
Sbjct: 236 RTLEPGQFVQGGQTLSYLVRGNDK-WVTANYKETQIAHIYIGQKVRIKVDAFSGRT---F 291

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +  I           P  +   N ++ Q+   V + + D +  +    LR G   E
Sbjct: 292 HGTVTAISEATGSKYSLVPTDNSAGNFVKVQQRIPVRIDLNDASPKEMEC-LRAGMMVE 349


>gi|253559391|gb|ACT32362.1| SilD [Streptococcus sp. 'group G']
          Length = 459

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 53/395 (13%), Positives = 142/395 (35%), Gaps = 28/395 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R H      + L S++ +  L+ +++    EI+++S GE+     +  ++S     I   
Sbjct: 14  RRHHNFATFLILPSVLLVSFLVIFALFAKKEITITSQGELTPTKVIASVQSTSDHTIVVN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            ++N   I +G  ++ +           ++ +  ++   +  +   +++L+   N +   
Sbjct: 74  NLKNNKFIKKGDVIIQYSKTMENSQKKALEKRLATLNKQKNGLQILRTSLEQETNLFKGE 133

Query: 128 EK--------AFESREEQLLDFLGKYHST---CSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           ++         F  + + ++  + K ++     + + N+ IS +   L     ++     
Sbjct: 134 DEFGYSDTFNHFFKQSQDIITGIAKKNAEVNNQASLANHAISVITSQLDELHQKITDYEE 193

Query: 177 NRLDLENKSSLL------RALLSSHQKDLTMMK--NLFEKNAVSQNDLNQQERIVYKSTL 228
            +  + N+   L      +  L  +Q      +  +  ++  +SQ   N  E     + L
Sbjct: 194 LKQAINNQEYKLSPDNPHQTALKKYQTQFQTQEDNSALKEEYLSQISQNISELESSMANL 253

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            ++       N+         + +     +L+  S+ L   +    +   ++       +
Sbjct: 254 NIQR--ASTGNLSLPDTSHRIKIDSLKTQFLQNTSQQLTTVENQITELKDQIEQANIQLK 311

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK---LTYIRAKVTPKQIQHVKKG 345
              I++P  GTI  N  F   +       + +I P  +     +I   VT + +  +K+ 
Sbjct: 312 NNIIIAPETGTIHLNSEFEGKSLIPNGSEVAQIYPDIQKIKEVFITYYVTSEHVSLLKEK 371

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
               +      + +       I+ ID   ++ D  
Sbjct: 372 QGVRLSLEKVGN-QTLTINGTIQTIDKSATKTDQG 405


>gi|330996074|ref|ZP_08319968.1| hypothetical protein HMPREF9442_01043 [Paraprevotella xylaniphila
           YIT 11841]
 gi|329574071|gb|EGG55649.1| hypothetical protein HMPREF9442_01043 [Paraprevotella xylaniphila
           YIT 11841]
          Length = 436

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 53/427 (12%), Positives = 141/427 (33%), Gaps = 22/427 (5%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + +  P   +    +    ++  +  S       S+++   +       E+ +  SG + 
Sbjct: 21  MGQVPPWIQRWDITVMAFLMVLFLGISWFFKFPQSLNAQVTLTTATPPAELHARSSGQLD 80

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V++  ++  GT L    +      +        N +    T  S   FL  + +   
Sbjct: 81  FVAVKDKERVEAGTVLAVIRNTANFRDMSELATLYHNWKSGKITADSMWVFL-ERKEWQA 139

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             ++S        L  Y +   + +     ++ +  + +   M       + L  K + +
Sbjct: 140 GEWQSVFLAFKQSLENYLNYQKRNYYPRKIALKKEERARRMDMEHHKREEMMLGEKQAEV 199

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-QERIVYKSTLELRENIHEQKNMLRHINEL 247
              +            LF K   S+   ++  +  +      L   +++++  ++ + E 
Sbjct: 200 ARKIYLRDSV------LFSKQIGSEESYDEALQAYLQSRRSVLDNMLNQKEMSMQRLQEK 253

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E  L+  +  +E +    Q      +++     L+   +   + SPI G +     +S
Sbjct: 254 --ETELDLEHQYEETASTCRQALWAAGEQLE--AQLKAWEQAYVLRSPITGNVNLMGIWS 309

Query: 308 SSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S+ +    + +  ++P        +A +       V+KG    VR  ++ D         
Sbjct: 310 SNQHVAAGELVFIVLPEKPDAPIGKALLPAAGAGKVEKGQRVNVRLNNFPDKEYGFLVGR 369

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQ 424
           ++ +  I  ++ N       Y V ++      +     + +            K+  L +
Sbjct: 370 VKGVSDIPDEESN-------YFVEIEFPKGLTTNYKRKLPMSKQMVGTAQIIIKDKRLIE 422

Query: 425 EIIHPIT 431
             + P++
Sbjct: 423 TFVEPVS 429


>gi|206562789|ref|YP_002233552.1| efflux system transport protein [Burkholderia cenocepacia J2315]
 gi|198038829|emb|CAR54791.1| efflux system transport protein [Burkholderia cenocepacia J2315]
          Length = 374

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 44/363 (12%), Positives = 103/363 (28%), Gaps = 82/363 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V +   +  G PL+  +       +   +V++      +D  ++         
Sbjct: 78  GYVTDVYVRDNQPVKAGDPLVRLD-------VRQYQVALAQALATVDARRA--------- 121

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                           I+     +  +   +        D + K
Sbjct: 122 -------------------------------DIARAEADISQQHANLEQ-----ADAQAK 145

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S + A  +S   + T    L    A +   +            +L+    +    L   
Sbjct: 146 VSRINAQHAS--DEYTRYAPLAATGAETHERV-----------ADLKSTRDQAAATLAAN 192

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N     A  + A++    +  L+Q +       +     +   +   + S +AG +  ++
Sbjct: 193 NASIAAARTQIASF----TAQLQQARAQLEAAQASAAQAQLDLDNTIVRSTLAGRV-GDR 247

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     Y Q    L+ +VP   +  + A     QI +++ G    +      D       
Sbjct: 248 TVRVGQYVQPGTRLLTVVPVDSIYLV-ANFKETQIGNMRIGQPVELHVDALPD---GPLS 303

Query: 365 AIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +++   P        +  +      T+    V ++I   A +     L  G    V   
Sbjct: 304 GVVDSFAPGTGAQFALLPPENATGNFTKIVQRVPVRIRLAANARAQRMLLPGLSVTVDVD 363

Query: 417 AKN 419
            ++
Sbjct: 364 TRS 366


>gi|148983913|ref|ZP_01817232.1| BlpC ABC transporter [Streptococcus pneumoniae SP3-BS71]
 gi|147924060|gb|EDK75172.1| BlpC ABC transporter [Streptococcus pneumoniae SP3-BS71]
 gi|301799595|emb|CBW32148.1| ABC transporter BlpB [Streptococcus pneumoniae OXC141]
          Length = 453

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 63/439 (14%), Positives = 144/439 (32%), Gaps = 31/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIK 68
           +R +      + +   +    ++ +S++   EI+V+S GEI     +  I+S   + I+ 
Sbjct: 13  QRRYHNYATVLIIPLSLLFTFILIFSLVATKEITVTSQGEIAPTSVISSIQSTSDNPILA 72

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V N   + +G  L+ + +             ++ L    +        L    D+  
Sbjct: 73  NHLVAN-QVVEKGDLLIKYSETMEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLFS 131

Query: 129 KAFE--------SREEQLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNR 178
              E        +  +Q  D       T ++V N     +S   +++ ++T+++      
Sbjct: 132 GEDEFGYHNTFMNFTKQSHDIELGITKTNTEVSNQASLANSSSSAIEQEITKVQQQIGEY 191

Query: 179 LDLENKSSLLRALL-SSHQKDLTMMKNLFEKNAVSQ--------NDLNQQERIVYKSTLE 229
            +L +     RA L +S+     + + L      +Q        + +NQ    +  S   
Sbjct: 192 QELRDAIINNRARLPTSNPHQSILNRYLVASQGQTQGTAEESFLSQINQSIAGLESSIAS 251

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+       ++  + N L  +  +    +L+  S+     +    +   +L    +  E 
Sbjct: 252 LKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLEN 311

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGY 346
            T+ +P    +  N  F   N       + +I P    ++   I   V    +  + KG 
Sbjct: 312 NTLTAPSKDIVHLNSEFEGKNRIPTGTEIAQIFPIITDTREVLITYYVASDYLPLLDKGQ 371

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           T  ++     +         ++ ID   ++ +     +      L   D         ++
Sbjct: 372 TVRLKLEKIGN-HGITIIGQLQTIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQ 424

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    V       T    
Sbjct: 425 YGLQGRVTSVTAKKTYFDY 443


>gi|238923328|ref|YP_002936843.1| hypothetical protein EUBREC_0945 [Eubacterium rectale ATCC 33656]
 gi|238875002|gb|ACR74709.1| Hypothetical protein EUBREC_0945 [Eubacterium rectale ATCC 33656]
          Length = 376

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 51/422 (12%), Positives = 144/422 (34%), Gaps = 77/422 (18%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +N PA    +  +  + +I  + WSI  P   ++ + G + N+++   + S    I+   
Sbjct: 20  KNPPAFGYILITVVAVFLIVAVVWSIKTPKVYTIQAQGTVTNDESNYVMCSYTGEILDS- 78

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            +E G+ +  G  L T +  +               +  ++  + + +   ++Y +L K+
Sbjct: 79  NMEEGALVEAGDVLFTIKSTD-----------YDLQQTQLEDNRKSYEEQISQYSLLIKS 127

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +             +   +K  +    S++ + K ++ + ++              ++A
Sbjct: 128 IKD---------DTNYFDETKADDGLYWSLFETYKSQVEQNKADVSTYQAYGYTDEQIQA 178

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L ++Q              + +   +  +                            +E
Sbjct: 179 QLETNQ------------GKIDEVYYSAIQ----------------------SAETKIEE 204

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           ANL+ A+   +++                   +   ++   + +  +G +    ++ S  
Sbjct: 205 ANLQIASIDAQLA------------------AVTSGQDAYEVKATTSGVLHMLGNYKSGM 246

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q +  +  I P +   Y+ A V+   +  +++G    V     +          + +I
Sbjct: 247 VVQTTTTVATITPENSQRYLEAYVSTSDMARMREGDRVQVVMDGLSQNVYGTISGSVSRI 306

Query: 371 DP-IISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           D  + +Q+  +  T   ++V++ +     L+   + +++ NG  A         T    +
Sbjct: 307 DSNVTTQEGQDGATSRAFKVMIVLDQDYVLSREGDKVDVTNGMTAAARIQYDKVTYFNYV 366

Query: 427 IH 428
           + 
Sbjct: 367 LE 368


>gi|81299364|ref|YP_399572.1| secretion protein HlyD [Synechococcus elongatus PCC 7942]
 gi|81168245|gb|ABB56585.1| Secretion protein HlyD [Synechococcus elongatus PCC 7942]
          Length = 450

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 49/388 (12%), Positives = 130/388 (33%), Gaps = 81/388 (20%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++  V++SG I+     V +    +G++ +  VE G ++ QG  +   ++ E        
Sbjct: 62  LQEKVTASGSIVPI-RTVNLSPKTAGLLVEVLVEQGQKVQQGQLIARMDNRELRAQQLQA 120

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++   +  +   ++                                T  +V + G  +
Sbjct: 121 RAALAAAQAQLQVLRNG-------------------------------TRPEVLDQGREA 149

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           + ++            L + +L+ +                  + L  + A+++   ++ 
Sbjct: 150 IRQAQAAAQQAAARRALAQQELKRQ------------------EALVGEGAIARQAYDRA 191

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                ++   L++ I   + + R   EL + A  E          ++ Q +    + + +
Sbjct: 192 LTDAAETDAALQQAIGRLREVERRQQELQNGARPE----------EVRQAEARVGEAIGR 241

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--------IVPHSKLTYIR 331
           L  +E       I +P +G I   +      +   +             IV  ++   + 
Sbjct: 242 LQSVEVQLADTEIRAPFSGIITQ-RYADPGAFVTPTTSASATASATSTSIVALAEGLEVL 300

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A+V    I  ++ G +  VR   +     + F+  +  + P   ++ N       ++V +
Sbjct: 301 AQVPEVDISRIRVGQSVQVRVDAFP---TQTFEGKVRLVAPEAVEEQNVTS----FQVRV 353

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
                       +L +G  A++ F  ++
Sbjct: 354 -----TLQTGQNQLGSGMNADLDFIGRS 376


>gi|309390065|gb|ADO77945.1| efflux transporter, RND family, MFP subunit [Halanaerobium
           praevalens DSM 2228]
          Length = 492

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 57/401 (14%), Positives = 131/401 (32%), Gaps = 57/401 (14%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +G +    +V +I +   G+ +K  VE G +I  G+ L+  +D          + ++++ 
Sbjct: 45  TGTLTPIQDV-DIPAQTGGVAEKVNVEIGDEIEAGSELIKIDDQTLLIQKRQSEAALESA 103

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R + +  K+       +   ++ ++E+ +  L           +K     +  +Y + + 
Sbjct: 104 RANYNELKNGATE--EEMTRVKSSYENAKNSL---------ESAKTNLKLMEELYNNRRS 152

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              ++ S      + +   +  +      +KD    K L+  N +S+N L+Q E     +
Sbjct: 153 LEQQLVSAEQQLENSKQSLNQAQINYDQAKKDYQRSKKLYADNVISENKLDQAENSFENA 212

Query: 227 TLELRENIHEQKNMLR-------------HINELYDEANLEFANYLKEIS---RDLEQNQ 270
              L +         R              + +  + A  +  N    +     +L++ +
Sbjct: 213 ESSLSQAKTSLAVAERNYQLTKATYDNPTELKQQLENARNQVENAQSNLEVSKANLDEAE 272

Query: 271 R------------TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           R            +     + L   +    +  I +   G +               Q +
Sbjct: 273 RGPREEKVRAGLASLRQAEASLDQTKDQISKTKITASFTGVVNQVNVD-QGEMISNGQTV 331

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + ++ +    Y    VT      +KKG    V+     +  +      I  I P      
Sbjct: 332 VNLI-NIDELYAEIGVTAATASAIKKGELVKVK----PETMQHFIDGEITNIAPAADSSS 386

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   + V +KI      + + +LR G  A+V      
Sbjct: 387 RT------FLVKVKI-----ENKDHKLRAGMFADVSLAKGK 416


>gi|325109676|ref|YP_004270744.1| efflux transporter RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
 gi|324969944|gb|ADY60722.1| efflux transporter, RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
          Length = 521

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/318 (10%), Positives = 101/318 (31%), Gaps = 43/318 (13%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           ++G +      + + +   G++++  V  G  +  G P+     I+    +   + ++K 
Sbjct: 88  AAGWVEPRPTPINVTALTEGVVEELLVVEGQPVQAGEPVARLIQIDAKLALRQAENALKL 147

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +   ++ ++ L                +    L                 ++ +  S+ 
Sbjct: 148 RQAEQESVQAELTA---------AEMRVKYPVHLQAALADAQAALAQTETKLAKLPHSID 198

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               R++    N    +     +   L         ++    ++  +++ L + ++    
Sbjct: 199 AAEARVQYTQQNYEGKQAAKDAIAGRL---------VQQALSEHLDAKSQLTELQKRRPY 249

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
              E++    +   +   +  L +E+       LK+    L+  +   AD    +  ++ 
Sbjct: 250 LENEVKTLQDKVTALNSQLELLIEESRQ-----LKDARARLKMAENQVADAELTVEKVQL 304

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM-----------KIVPHSKL--TYIRA 332
             E+  + +P +G ++          A     +M            +V         +RA
Sbjct: 305 ALERTVVKAPTSGRVLTL-------VAAPGSRVMGLDSNSVHNSSTVVTMYDPARLQVRA 357

Query: 333 KVTPKQIQHVKKGYTATV 350
            V  + +  V+ G    +
Sbjct: 358 DVRLEDVPLVQPGQPVEI 375


>gi|327190508|gb|EGE57604.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CNPAF512]
          Length = 575

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 41/359 (11%), Positives = 97/359 (27%), Gaps = 88/359 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + + +V+ G  +  G  L   +       +     +   LR  +D  K+        
Sbjct: 294 SGRLSELRVDEGDVVKSGAVLAKLDATPNELAVRSADANAAALRATLDKLKAG------- 346

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                     R  ++      Y  + + + N  ++                         
Sbjct: 347 ---------PRPTEIAQARAAYDESLADLQNANLA------------------------- 372

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                              + L  +  +S+  L+Q       +    +      K +   
Sbjct: 373 ---------------YDRARQLRPQGTISEASLDQATAAKAMAAARSQSAREALKLLQEG 417

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                              + D+           + L     +     + +P  G I+  
Sbjct: 418 SR-----------------NEDIAAADAQLKAAEATLASAHTSLADTELHAPNDGVILS- 459

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +   +      +  +  ++  ++  ++R+ V    +  +  G   +V         +K +
Sbjct: 460 RVRENGAIVSPADTVF-VLSLTEPVWVRSYVAEPDLGRLHPGMKVSV---ASDTAPDKPY 515

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +  I  I P+      S +   L+T   Y + + I          +LR G P  V  + 
Sbjct: 516 EGTIGFISPVAEFTPKSVETPELRTDLVYRLRIVIDKPGP-----DLRQGMPVTVRLST 569


>gi|86358849|ref|YP_470741.1| hypothetical protein RHE_CH03250 [Rhizobium etli CFN 42]
 gi|86282951|gb|ABC92014.1| probable protein secretion protein, HlyD family [Rhizobium etli CFN
           42]
          Length = 337

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 39/355 (10%), Positives = 98/355 (27%), Gaps = 88/355 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + + +V+ G  +  GT L   +       +   + +   LR  +D  K+        
Sbjct: 56  SGRLSELRVDEGDVVKSGTVLAKLDAAPYEFAVRSGEANAAALRATLDKLKAG------- 108

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                     R  ++      Y  + + + N  ++                         
Sbjct: 109 ---------PRPTEIAQARAAYDESLADLQNANLA------------------------- 134

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                              + L  +  +S+ +L+Q       +    +      K +   
Sbjct: 135 ---------------YDRARQLRPQGTISEANLDQATAAKAMAAARSQSASEALKLLQEG 179

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                                D+           + L     +     + +P  G I+  
Sbjct: 180 SR-----------------VEDIAAADAQLKAAEATLASARTSLADTELRAPNDGVILS- 221

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +   +      +  +  ++  ++  ++R+ V    +  +  G   ++         ++ +
Sbjct: 222 RVRENGAIVSPADTVF-VLSLTEPVWVRSYVAEPDLGRIHPGMKVSI---ASDTRPDRPY 277

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +  I  + P+      S +   L+T   Y + + I          +LR G P  V
Sbjct: 278 EGTIGFVSPVAEFTPKSVETPELRTDLVYRLRIVIDTPGP-----DLRQGMPVTV 327


>gi|291565987|dbj|BAI88259.1| putative HlyD family secretion protein [Arthrospira platensis
           NIES-39]
          Length = 526

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 35/328 (10%), Positives = 111/328 (33%), Gaps = 28/328 (8%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               VE++S   G I +  V +G  + QG  +      +    +   + ++   +  +  
Sbjct: 122 ARESVEVRSEIEGRITQVYVRSGEMVNQGQAIARLRSDDLEAQLRQAQANLVRTQARVAE 181

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            ++                 SR E++ +  G+   + +++ +    S+   +     ++ 
Sbjct: 182 LQAG----------------SRPEEIAEARGRLAESVARLNDAQSGSLLAEINQAQAQID 225

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +        E + +  + L  +          L  +   +Q +L   ER + +     + 
Sbjct: 226 ANIAAAELAEKRVTRFQELTEAGAISRDEFDALVSQKQTAQANLRAAERRLEQLQQNRQS 285

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            I  ++  +    +                 ++++Q +   A+  +++  LE   ++ T+
Sbjct: 286 EIALREAGVEQSQQALRRLESGTR------PQEIDQAEAQVAEAAARVRQLEVQLQETTV 339

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +    +    ++  +   L  +   +    +R  +  ++   +++G    ++ 
Sbjct: 340 QAPFTGIVGDVTAR-PGDFVNRGATLTSLT-ENDRLELRLSIPLERQGDLREGLAVEMQ- 396

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNN 380
                  +      I  I P ++    +
Sbjct: 397 ---DPQGQPIGTGRISFISPTVNPNSQS 421


>gi|254425482|ref|ZP_05039199.1| auxiliary transport protein, MFP family, putative [Synechococcus
           sp. PCC 7335]
 gi|196187905|gb|EDX82870.1| auxiliary transport protein, MFP family, putative [Synechococcus
           sp. PCC 7335]
          Length = 435

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 60/413 (14%), Positives = 143/413 (34%), Gaps = 24/413 (5%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILL-------PIEISVSSSGEILNEDNVVEIKSPFS 64
           + P S +   L  +I +  L+  + L        P + ++S SG I  E    ++ +   
Sbjct: 25  HKPFSNRMKKLRVLIPVGLLLVVAGLGVRYRFNRPDDSTISLSGRI--ESYESDLGAKVG 82

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++   V  G  + QG  + T +D ET   ++  K  +      I   +  ++ + ++ 
Sbjct: 83  GRVESIAVREGDGVTQGQVIATLDDSETRARLEAAKARVSAAEQQITQAELQIEVVASQV 142

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK--LTRMRSIYLNRLDLE 182
              + +    +   +  +G+  ++ +       ++  ++ +    L   R        L 
Sbjct: 143 IEAQLSLAQAQGDTVGRMGQSEASVAAAQAQLAAAEAQAQQAASTLRLARVDRDRFAMLV 202

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           ++ ++ +      Q      ++       +     QQ      +  + + +    +    
Sbjct: 203 DQGAIAQQQFDQAQTQFETAQDTLSARQAAVTAAQQQVNAAQGALTQTQTSQLNPEIRAA 262

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +N L  +              +L+Q Q   A+  +++  LE       I SPI G ++ 
Sbjct: 263 QVNRLQKQQAQAQTQLAV-AQAELKQAQADQAEIEARINDLE-------IKSPIDGVVLT 314

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++            ++ ++ + +  Y+R  +   Q+  V+ G  A V      D     
Sbjct: 315 -RTVEPGEVISTGTSVLTVI-NLEEVYLRGYIPEGQVGAVRVGQAAQVFLDSAPDR---P 369

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             A +  ID   S    N+  ++     +    L   +     + G PA+   
Sbjct: 370 LAATVTAIDTEASFTPENIYFEDDRVTQVFGLKLTIDNPQGFAKPGMPADGEI 422


>gi|92116496|ref|YP_576225.1| secretion protein HlyD [Nitrobacter hamburgensis X14]
 gi|91799390|gb|ABE61765.1| secretion protein HlyD [Nitrobacter hamburgensis X14]
          Length = 449

 Score = 82.8 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 54/387 (13%), Positives = 116/387 (29%), Gaps = 74/387 (19%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I   V +SG +    +V ++ S  SG I +  V     +  G P+   +       ++
Sbjct: 37  GNISTLVKASGTVEPVVSV-DVSSQLSGRIAEVFVSFNDSVTAGQPIAQVDQEIFAARVN 95

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++                                               +V     
Sbjct: 96  EARAAL-----------------------------------------------RVAKATA 108

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                +LK     M +        +++S+   A     +++ +    L    + ++ DL+
Sbjct: 109 QVQRAALKRANVAMTNAKTAETLAKDQSAANEARQGEAEREFSRKLALARTGSGTERDLS 168

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q   +      +LR ++ +         ++  EA             +LE          
Sbjct: 169 QARALRDAGAADLRASLEQI--------QMKAEAIAIAEAEKHMAEANLENADAVVEQRQ 220

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKLTYIRAKVT 335
           + +   E   ++  + +PI G I+          A    ++ L KI    +   +  K+ 
Sbjct: 221 ATVDQAELDLDRTVLRAPIDGIIIKRDVNPGQTVAVSLEAKTLFKIANDLREMEVHGKID 280

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKI 393
              +  +K G TA      Y D     F   + +I   P + Q          Y  I+  
Sbjct: 281 EADVGQLKVGQTARFSVDAYPDRT---FSGQVLQIRKSPEVLQNVVT------YTAIVSA 331

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
                 ++++ L  G  A++     +T
Sbjct: 332 P-----NSDLLLLPGMTAQLRIVVSDT 353


>gi|294673830|ref|YP_003574446.1| toxin secretion protein [Prevotella ruminicola 23]
 gi|294474301|gb|ADE83690.1| putative toxin secretion protein [Prevotella ruminicola 23]
          Length = 430

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 64/428 (14%), Positives = 147/428 (34%), Gaps = 47/428 (10%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             +L ++ I   I          +++ +  I   +  V I +  SG +++   ++G  + 
Sbjct: 35  GGILLVLFIGCFI-----FKYPDTITCTVTITKTEPPVWIVAKTSGRLQELYAQDGQHVN 89

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G  +   E+   T  +      +  L    + E   L   +     ++  + +  + + 
Sbjct: 90  AGDVIAVIENPANTQDVLKLDSILSVL--FENGEGINLHLDDAHLGSIQSTYTTLAKAIT 147

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D+    +     +++  I++    L+     + SI       E      + +     ++ 
Sbjct: 148 DYNNFVNKN---LYDQRIAAEEAQLRPYSEYVESI-------EKLVCYSQRIKFLSNENY 197

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNMLRHINELYDEANLEFA 256
              K L +K   S +DL   E+ +  S +   ++R ++   K  +  I     E  L+  
Sbjct: 198 QREKTLHDKGLTSTSDLESTEQSLLSSNMSAEQIRSSLANAKIQMAQIYNTISELKLQKE 257

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              ++    L      ++      T + + ++   + SPI G + YN  +  +     S 
Sbjct: 258 QERQQQETIL------WSAWEGTRTAIREWKQTYLLQSPIEGFVSYNNLWKINQNITSSD 311

Query: 317 PLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
               ++  SK   I +AK+       VK G    ++   Y  +        I  +  +  
Sbjct: 312 KAFSVISSSKEQSIGKAKIPVAGSGKVKIGQRVNIQLDGYPYLEYGFLTGCITSVALMPD 371

Query: 376 QQ-------DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           +          N QT  Y + I +  DL+                     + ++A+ II 
Sbjct: 372 EDIYTATFELQNSQTTSYGKAIRQTGDLSGVGE-------------IITDDLSVAERIIG 418

Query: 429 PITDNWPK 436
           P+   + +
Sbjct: 419 PLKYLFHR 426


>gi|327538657|gb|EGF25309.1| ABC transporter membrane fusion protein, DevB type [Rhodopirellula
           baltica WH47]
          Length = 430

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 59/382 (15%), Positives = 130/382 (34%), Gaps = 47/382 (12%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL-IDLKKVS 102
           V + G +     ++ + +     + K  VE G ++  GT L+  E +    L + + +  
Sbjct: 75  VMALGTLEPRGGILAVMAAPGDRVSKIYVEPGQEVAAGTVLMDLESLPARQLELSIAQTK 134

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   +  I  E++A +    K  V   + +  E +L D   ++    SK     ++ + +
Sbjct: 135 LDEAKRRIAAERAAGEA---KLQVARSSLKQAESKLSDAQKRFKD--SKADGGELNLLKQ 189

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +  +   R+R +                         +  ++   +  VS+N L+ +   
Sbjct: 190 AADLGQRRLRQLE------------------------SASRDPARQRLVSENALDTEALK 225

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           V +S       + + +  +       D A  E      E+S    +   +      ++ +
Sbjct: 226 VSESQARYESALRDAQEAIDEGRFAVDSAEQEI--RATELSLIAAEQSASLESLKQQIEL 283

Query: 283 LEKTREQKTILSPIAGTI--VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
           L+       +++P  G +  V     +++        LM +   +      A+V    + 
Sbjct: 284 LKFNVATSRLVAPTKGRVLRVDATIGTATGV----SALMHMA-DTSNMVCVAEVNVADLS 338

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI----TDL 396
            V+ G TAT+  P   +    K + I   I          +   + Y   + I     D 
Sbjct: 339 RVEVGQTATITSPALREPLRGKVQRIQSLIAAPTLASPYPMAAVDRYSADVVIAIDSDDS 398

Query: 397 AFSDNNIELRNGFPAEVLFTAK 418
             +   IEL      +V   A 
Sbjct: 399 TSASRLIEL----QVDVEIKAG 416


>gi|213420348|ref|ZP_03353414.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 195

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 70/248 (28%), Gaps = 53/248 (21%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
               ++S   GI+ +  V  G ++     +   +       +       +          
Sbjct: 1   REQVLQSLDGGILAQLTVREGDRVQANQIVAQLDPTRLASNVGESAAKYRASLA------ 54

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
            +   L  +   L  AF +      D +                             R  
Sbjct: 55  -SSARLTAEVSDLPLAFPAELNGWPDLIA-------------------------AETRLY 88

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              R  L +  + LR  L+S  K+LT+ + L +  A S  ++ + +R      L++ +  
Sbjct: 89  KSRRAQLADTEAELRDALASVNKELTITQRLEKSGAASHVEVLRLQRQKSDLGLKITDLR 148

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            +                     Y  +    L +         + L   E +  + TI S
Sbjct: 149 SQ---------------------YYVQAREALSKANAEVDMLSAILKGREDSVTRLTIRS 187

Query: 295 PIAGTIVY 302
           P+ G +  
Sbjct: 188 PVRGIVKN 195


>gi|312792292|ref|YP_004025215.1| secretion protein hlyd family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179432|gb|ADQ39602.1| secretion protein HlyD family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 542

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/396 (14%), Positives = 147/396 (37%), Gaps = 44/396 (11%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           PI+  +   G +  E+    I S  SGI++K  V  G  + +G  L+  +       +  
Sbjct: 56  PIKEKLVLRGIVRAEE--KAIYSLVSGIVRKVYVCEGDYVKKGKQLVYIDSSNKVFELKK 113

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN---- 154
           K+  ++ L   I   +  L+    +      +F+ + +++    G+  S  S +F     
Sbjct: 114 KEKELEKLSNEIKKLQEKLEKCKFR-----TSFDGQVQEVYVTEGESVSLGSNLFKIVSD 168

Query: 155 -------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL--LSSHQKDLTMMKNL 205
                     S +++S+++       +    ++ E       ++  ++ + + +  +K +
Sbjct: 169 KSLFLTVAFPSWLFKSIRVGQKLKVVLTEYDIETEGSVDAKSSVFYINDNGQSVFDVKIV 228

Query: 206 FEKNAVSQ------------NDLNQQERIVYKSTLELRENI--HEQKNMLRHI----NEL 247
            +    S              +  Q+ R V +  L++ E +   E +  ++ I     + 
Sbjct: 229 VDNEGKSLPSGAKAFCVMTSGNFYQEVRSVNEGILKMDEIVIKSEVEGRIKKIFVKQYDR 288

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             + ++    + ++I   ++  +    +    +  L+K      ++SP+ G I      S
Sbjct: 289 IKKGDILIEFFDQDIREQIDVKKDQIYETKEAIENLKKEINNCKVISPVNGVISNLNV-S 347

Query: 308 SSNYAQQSQPLMKI-VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFKA 365
                     +  I  P+       +K++   +  VKKG    + F  + + I E +   
Sbjct: 348 EGKLINMGDSICSIWSPND--LIFESKISEYDVYKVKKGDRVKLNFTPHSSYIPESELDG 405

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           ++E I+P     ++  Q   ++ + ++  D      
Sbjct: 406 VVESINP-RPLDEDLSQNISWFNIKVRFHDENIKRG 440


>gi|49475970|ref|YP_034011.1| multidrug resistance protein vceA [Bartonella henselae str.
           Houston-1]
 gi|49238778|emb|CAF28044.1| Multidrug resistance protein vceA [Bartonella henselae str.
           Houston-1]
          Length = 353

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 88/277 (31%), Gaps = 32/277 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +++  ++L     ++ + +    D + + +   A+ ++ Q  L     L       Q
Sbjct: 93  EARLNTQQKTLLRIDAQIVAAHSALDDAQAQKAAASAIATNAQLTLKRTTELKADRYAPQ 152

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +D++  +    ++   +     +      +I  L                    + +   
Sbjct: 153 SDVDDAKSAYEQAIANVNRADAQIAAARANIQVL---------------EAQRSETESQT 197

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                     ++  +   I +P  G I    + +        Q L  +VP  +  YI A 
Sbjct: 198 KSLELTRDKAKRDLDSTIIRAPFDGIIGNLTAKTGDFVVN-GQRLAALVPI-QALYIEAN 255

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYE- 388
               Q+Q++  G TA + F  +   +++ F   +  I P      S       T  + + 
Sbjct: 256 YKETQLQNIHAGQTAYITFDAF---KKEVFTGRVLSIAPATGAVFSLLPPQNATGNFTKI 312

Query: 389 -----VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                V + I + A  D    +R G    V    +  
Sbjct: 313 VQRIPVRISIPEEALKDK--RIRAGMSVSVQIDTRTK 347



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 74/221 (33%), Gaps = 14/221 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
            + ++  I    +G IKK  ++    + +   L   ++        +T   ++ ++ ++ 
Sbjct: 45  VQGDIAAIAPKLNGYIKKIAIKANQVVKKDDVLFCLDNGDYQIALDQTEARLNTQQKTLL 104

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL---LDFLGKYHSTCSKVFNYGISSVY 161
            +   I    SALD    +         + +  L    +     ++  S V +    S Y
Sbjct: 105 RIDAQIVAAHSALDDAQAQKAAASAIATNAQLTLKRTTELKADRYAPQSDVDDA--KSAY 162

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                 + R  +               R+   S  K L + ++  +++  S       + 
Sbjct: 163 EQAIANVNRADAQIAAARANIQVLEAQRSETESQTKSLELTRDKAKRDLDSTIIRAPFDG 222

Query: 222 IVYKSTLELRENI--HEQKNMLRHINELYDEANLEFANYLK 260
           I+   T +  + +   ++   L  I  LY EAN +      
Sbjct: 223 IIGNLTAKTGDFVVNGQRLAALVPIQALYIEANYKETQLQN 263


>gi|260598053|ref|YP_003210624.1| hypothetical protein CTU_22610 [Cronobacter turicensis z3032]
 gi|260217230|emb|CBA31128.1| hypothetical protein CTU_22610 [Cronobacter turicensis z3032]
          Length = 360

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 96/302 (31%), Gaps = 29/302 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V + A   + + L+    + +          ++    +L   L + RS        +   
Sbjct: 77  VQDFAHVKQGDVLMTIDDRIYKQRVHQAQATLAMREAALANNLQQRRSAEATIAQNKAAL 136

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  RA    +Q DL  +K L +  ++S                E    I         + 
Sbjct: 137 ASARAQSLHNQADLRRVKELAQDGSLS--------------VRERDAAIASAAQGSASVE 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +   +  +   N L+ +  +    +    +  + L + E   +   I++P  G +     
Sbjct: 183 QAAAQLEVSRQN-LQSVIVNRASLEADVENARAALELAEIDLQNTRIIAPRDGQLGQITV 241

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                Y      L  +VP        A +   Q+  VK G   T       D +   F+ 
Sbjct: 242 R-QGGYVTAGARLTSLVPPQNWII--ANLKETQLADVKTGQPVTFTVDALNDEK---FEG 295

Query: 366 IIEKIDPII----SQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTA 417
            ++ I P      S    +  T  + ++     ++I  L  ++    LR G   +V    
Sbjct: 296 RVQSISPATGVEFSAITPDNATGNFVKIAQRIPVRIEVLGDAEKRARLRPGMSVQVTINT 355

Query: 418 KN 419
           ++
Sbjct: 356 RS 357


>gi|90425082|ref|YP_533452.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90107096|gb|ABD89133.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 404

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 88/302 (29%), Gaps = 28/302 (9%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            V++    +  +QL     + +    +     +             +   Y        +
Sbjct: 102 PVVQNQTIAAGDQLAKIDDRSYRVRVEQAKAQLDQARAGKARAEAELNRQYAQIEQANAQ 161

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  L+  +  +   + L    A +    +Q      ++  ++  N  + ++  R +
Sbjct: 162 LGQSEVSLAFAENQVARYRPLAASGAEATERYDQIRNQRDQARAQVALNNAQVESARRMV 221

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             +  +     A   +                 ++L   +   +   ++SPIAG +    
Sbjct: 222 PSIEAQIAEAQAAIEQ---------------AEAQLHQAQIDLDNTVVVSPIAGRVGDLT 266

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     + Q    +M +VP     Y+ A     QI  ++ G  AT+      + +     
Sbjct: 267 AR-VGQFVQPGMRMMTVVPVHD-LYLEANYKETQIGLMRVGQPATIEVDALPNEK---LH 321

Query: 365 AIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             +    P        +  Q      T+    V ++I   A  +    L  G    V   
Sbjct: 322 GEVLSFSPGTGSEFSLLPPQNATGNFTKVVQRVPVRIRIDAGPEARKVLVPGLSIVVDVD 381

Query: 417 AK 418
            +
Sbjct: 382 TR 383



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 40/134 (29%), Gaps = 9/134 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V     I  G  L   +D          +V ++  +  +D  ++       +
Sbjct: 95  SGYLVGVPVVQNQTIAAGDQLAKIDD-------RSYRVRVEQAKAQLDQARAGKARAEAE 147

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +      E    QL           ++V  Y    +  S      R   I   R     
Sbjct: 148 LNRQYAQIEQANAQLGQSEVSLAFAENQVARYR--PLAASGAEATERYDQIRNQRDQARA 205

Query: 184 KSSLLRALLSSHQK 197
           + +L  A + S ++
Sbjct: 206 QVALNNAQVESARR 219


>gi|323139713|ref|ZP_08074752.1| secretion protein HlyD family protein [Methylocystis sp. ATCC
           49242]
 gi|322395019|gb|EFX97581.1| secretion protein HlyD family protein [Methylocystis sp. ATCC
           49242]
          Length = 397

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 80/267 (29%), Gaps = 30/267 (11%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           ++     +          +  + +++ NR  +  K +   A+    + DL   ++     
Sbjct: 86  AQRARAALGQAEAEFGRAVRAVGALFANRQQVCQKLASRTAIRERTRHDLARYRSAAPSG 145

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           A S+  L   E  +     +LRE   E +     +       + +        +    + 
Sbjct: 146 AASRQILQNTEDQLAAQEADLRETRSELEAFDARLVNATRVRHPDIEAAKARFNDAYVET 205

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
            R                    I +P+ G +   +        +    +M IVP     +
Sbjct: 206 LRQ------------------NIRAPVTGYVAKRRV-QVGFRVKPGDQIMNIVPLDH-LW 245

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYA--DIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
           + A +   +++ ++ G  A +    Y   ++     + ++     + +    +  T  + 
Sbjct: 246 VEANLWENRLERIRPGQKAEIIVDLYGGKEVYHGTVEGVVPGSGSVFATLPPDNATGNFI 305

Query: 388 E------VILKITDLAFSDNNIELRNG 408
                  V + I           LR G
Sbjct: 306 RIVQRIPVRIAIDPEELKKR--PLRPG 330



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/204 (10%), Positives = 58/204 (28%), Gaps = 7/204 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPI--EISVSSSGEILNEDNVVEIKSPFSGII 67
           +++  A    +  +  +GI      ++   +  +    ++       N++ + +  +G++
Sbjct: 5   RKSIRARRSFLLKVVFLGIAIAAFLALFKWLTYDRDRVTTDNAFVTGNIIPVMADATGVV 64

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               VE    + +G  L+  +       +   +         +    +    +  K    
Sbjct: 65  ASVNVEETQFVKKGDVLVRLDAQRARAALGQAEAEFGRAVRAVGALFANRQQVCQKLASR 124

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
               E     L  +     S  +         +  +      +   +   R +LE   + 
Sbjct: 125 TAIRERTRHDLARYRSAAPSGAA-----SRQILQNTEDQLAAQEADLRETRSELEAFDAR 179

Query: 188 LRALLSSHQKDLTMMKNLFEKNAV 211
           L         D+   K  F    V
Sbjct: 180 LVNATRVRHPDIEAAKARFNDAYV 203


>gi|78063191|ref|YP_373099.1| HlyD family secretion protein [Burkholderia sp. 383]
 gi|77971076|gb|ABB12455.1| Secretion protein, HlyD family [Burkholderia sp. 383]
          Length = 364

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/371 (12%), Positives = 102/371 (27%), Gaps = 75/371 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    +G + K  V +  ++  G  L+  +  +           +      +D
Sbjct: 62  VGGDVTVLAPKVNGFVDKILVTDNQRVKAGDVLVQLDARDYDA-------KLAQASAEVD 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           + +SA+  L  K  +                                             
Sbjct: 115 SARSAVTELAAKQQL--------------------------------------------- 129

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
              Y          +   A L+    D    + L + +AVS   + + +    K+   + 
Sbjct: 130 --QYAVIGQQAADKNASSAELTRAASDRVRYRELVKSDAVSNQIVERADADYSKAGAAVE 187

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   Q      ++   +     E  T
Sbjct: 188 RSDAALLASKRQLDVL---------------GAQLADAQARVNTALAAQRVAALNVEYTT 232

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +  N++      A    PL+ +VP     ++ A     Q++ +  G    V 
Sbjct: 233 IRSPVDGYV-GNRTGRVGMLANVGVPLLTVVPA-AGLWVDANFKEDQLRKMHAGDRVDVS 290

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRN 407
               +     +  ++        S       T  + +++    +++        +  LR 
Sbjct: 291 LDASSTKLHGRVDSLAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGLDHVLRP 350

Query: 408 GFPAEVLFTAK 418
           G  A V     
Sbjct: 351 GLSAVVTVHTD 361


>gi|157377334|ref|YP_001475934.1| hypothetical protein Ssed_4202 [Shewanella sediminis HAW-EB3]
 gi|157319708|gb|ABV38806.1| conserved hypothetical secretion protein [Shewanella sediminis
           HAW-EB3]
          Length = 355

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/376 (15%), Positives = 111/376 (29%), Gaps = 82/376 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               + +I +  SG I +  V +   +  G  L T +                       
Sbjct: 45  VHGEITQISAEASGRITEIFVTDNQLVQAGDLLATID----------------------- 81

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                        D L +  +++  Q                    S    SL+   +R 
Sbjct: 82  -----------PRDYLARRDQAKAAQ--------------------SMATASLENNRSRT 110

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
               +   +      + RA     Q++L     L +  AVS+   + Q      +   L 
Sbjct: 111 ELQRVKIDETAAYLEVARATYELEQRELRRYSKLVKTGAVSKTLHDAQTNKARIADANLE 170

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               +       +  L  E +   A   +                 + L + E   +   
Sbjct: 171 AAQLKLTAAKHQLITLQTERSQIVAQEQQ---------------TRAALELRELELQDTQ 215

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           IL+PI G +  N+S     + +    ++ IVP     +++A     Q+ H+K G    V 
Sbjct: 216 ILAPITGLV-GNRSLQLGKFVKAGSGVLAIVPIDN-LWVQANYKETQLTHIKPGQEVEVL 273

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNI 403
              +      +FK  +    P    Q      +  T  + +V+    +KI      +   
Sbjct: 274 LDMFPGT---EFKGRVTSTSPSTGAQFSLLPPDNATGNFVKVVQRVPVKIQLEIPGELQG 330

Query: 404 ELRNGFPAEVLFTAKN 419
            +  G  AEV    ++
Sbjct: 331 RVVPGLSAEVTINTES 346


>gi|296136270|ref|YP_003643512.1| secretion protein HlyD family protein [Thiomonas intermedia K12]
 gi|295796392|gb|ADG31182.1| secretion protein HlyD family protein [Thiomonas intermedia K12]
          Length = 345

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/358 (12%), Positives = 105/358 (29%), Gaps = 88/358 (24%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G + +  V+ G  + +G  +   + +   D ++                ++    L  
Sbjct: 54  DAGRVSELLVQEGDAVRKGQVVARIDAVRYQDAVN----------------RAQAALLAQ 97

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  + +    SR +++ +      +  +   N   +                        
Sbjct: 98  QNVLAKLKAGSRPQEIAEARAGVDAALAAQANAKAT------------------------ 133

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                               K L E   + +  L+   + +  +   ++         ++
Sbjct: 134 ----------------YARQKTLVESGFLPRQSLDNVTQQLDTAAAGVQRARQALSLAVQ 177

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              +                  D+   +     + S L + ++      + SP  G +V 
Sbjct: 178 GPRK-----------------EDIAAAEAMVKADESALALAQRQLTDAVLYSPENG-VVE 219

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           N+     + A    P+M I   +   ++RA V   ++  +  G  A +    +     + 
Sbjct: 220 NRILEVGDMAAPQTPVMTIA-VNNPVWVRAYVPETELGKIAPGMRADILTDSFP---GQP 275

Query: 363 FKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           FK  +  I P       S Q   L+ Q  Y V +        + + +LR G P  V  
Sbjct: 276 FKGWVGNISPTAEFTPKSVQTTELRAQLVYRVRV-----YACNPDQKLRLGMPVTVQV 328


>gi|251781932|ref|YP_002996234.1| hypothetical protein SDEG_0518 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390561|dbj|BAH81020.1| hypothetical protein SDEG_0518 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 454

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/395 (13%), Positives = 142/395 (35%), Gaps = 28/395 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R H      + L S++ +  L+ +++    EI+++S GE+     +  ++S     I   
Sbjct: 14  RRHHNFATFLILPSVLLVSFLVIFALFAKKEITITSQGELTPTKVIASVQSTSDHTIVVN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDL---IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            ++N   I +G  ++ +           ++ +  ++   +  +   +++L+   N +   
Sbjct: 74  NLKNNKFIKKGDVIIQYSKTMENSQKKALEKRLATLNKQKNGLQILRTSLEQETNLFKGE 133

Query: 128 EK--------AFESREEQLLDFLGKYHST---CSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           ++         F  + + ++  + K ++     + + N+ IS +   L     ++     
Sbjct: 134 DEFGYSDTFNHFFKQSQDIITGIAKKNAEVNNQASLANHAISVITSQLDELHQKITDYEE 193

Query: 177 NRLDLENKSSLL------RALLSSHQKDLTMMK--NLFEKNAVSQNDLNQQERIVYKSTL 228
            +  + N+   L      +  L  +Q      +  +  ++  +SQ   N  E     + L
Sbjct: 194 LKQAINNQEYKLSPDNPHQTALKKYQTQFQTQEDNSALKEEYLSQISQNISELESSMANL 253

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            ++       N+         + +     +L+  S+ L   +    +   ++       +
Sbjct: 254 NIQR--ASTGNLSLPDTSHRIKIDSLKTQFLQNTSQQLTTVENQITELKDQIEQANIQLK 311

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK---LTYIRAKVTPKQIQHVKKG 345
              I++P  GTI  N  F   +       + +I P  +     +I   VT + +  +K+ 
Sbjct: 312 NNIIIAPETGTIHLNSEFEGKSLIPNGSEVAQIYPDIQKIKEVFITYYVTSEHVSLLKEK 371

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
               +      + +       I+ ID   ++ D  
Sbjct: 372 QGVRLSLEKVGN-QTLTINGTIQTIDKSATKTDQG 405


>gi|78222587|ref|YP_384334.1| secretion protein HlyD [Geobacter metallireducens GS-15]
 gi|78193842|gb|ABB31609.1| Secretion protein HlyD [Geobacter metallireducens GS-15]
          Length = 374

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 92/312 (29%), Gaps = 24/312 (7%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  ++ +      A    + Q +             +   + S    L M       
Sbjct: 71  EAHIHAISPRVSGTVTAVPVMDNQFVKKGETLVELDPTDYEVRVRSAAADLDMARNETSG 130

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
            Y          S  RA L   + DL     LF K  + +  L++ E     +  +LRE 
Sbjct: 131 DYAQVEAARAAVSHARARLDQAELDLRRGSVLFTKEVIPREQLDRLETARRVTAAQLREA 190

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +     +                         +   A   +KL     +     I+
Sbjct: 191 EEGVRKAQAELGLAGTGGK-----------------EARVAQREAKLREASLSLSYTRIV 233

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P+ G +      +  +  Q  QPLM +V  +   ++ A     Q+ H+K G   T    
Sbjct: 234 APVDGYVTRKSVET-GSTVQAGQPLMAVVALNDT-WVTANYKESQLAHMKPGQKVTFTVD 291

Query: 354 HYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNG 408
            Y       +  +I+       S   +   T  Y +V+    +KI     SD    LR G
Sbjct: 292 AYPSRTFTGRVDSIMAGTGAAFSLLPSENATGNYVKVVQRVPVKIVVDTGSDPRHLLRVG 351

Query: 409 FPAEVLFTAKNT 420
                       
Sbjct: 352 MSVIPTVNTGRK 363



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 57/178 (32%), Gaps = 3/178 (1%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R    +   + LL++I I   +     L    ++ ++     E ++  I    SG +  
Sbjct: 29  QRGGKRTRAGIILLAVIAIGLFMGTHWFLR-SKTLITTDNAFVEAHIHAISPRVSGTVTA 87

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V +   + +G  L+  +  +    + ++  +        +T          +  V   
Sbjct: 88  VPVMDNQFVKKGETLVELDPTDY--EVRVRSAAADLDMARNETSGDYAQVEAARAAVSHA 145

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                + +L    G    T   +    +  +  + ++   ++R         + +  L
Sbjct: 146 RARLDQAELDLRRGSVLFTKEVIPREQLDRLETARRVTAAQLREAEEGVRKAQAELGL 203


>gi|115360229|ref|YP_777367.1| secretion protein HlyD family protein [Burkholderia ambifaria AMMD]
 gi|115285517|gb|ABI91033.1| secretion protein HlyD family protein [Burkholderia ambifaria AMMD]
          Length = 363

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/371 (13%), Positives = 103/371 (27%), Gaps = 75/371 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    +G + K  V +  ++  G  L+  +  +           +      +D
Sbjct: 61  VGGDVTVLAPKVNGFVDKILVTDNQRVKAGDVLVQLDARDYDA-------KLAQAAAEVD 113

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           + +SA+  L  K  +                                             
Sbjct: 114 SARSAVTELEAKQQL--------------------------------------------- 128

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
              Y          +   A L+    D    + L + +AVS   + + +    K+   + 
Sbjct: 129 --QYAVIGQHAADRNASSAELTRASSDRVRYRELVKSDAVSNQIVERADADYSKADAAVA 186

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   +      ++   +     E  T
Sbjct: 187 RSDAALLASKRQLDVL---------------GAQLADARARVNTALAAQRVAALNVEYTT 231

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +  N++      A    PL+ +VP S   +I A     Q++ ++ G    V 
Sbjct: 232 IRSPVDGYV-GNRTSRVGMLANVGVPLLTVVPASG-LWIDANFKEDQLRKMRAGDRVDVT 289

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIE--LRN 407
               +     +  ++        S       T  + ++   + +         +E  LR 
Sbjct: 290 LDASSTRLHGRVDSLAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGLEHVLRP 349

Query: 408 GFPAEVLFTAK 418
           G  A V     
Sbjct: 350 GLSAAVTVHTD 360


>gi|218248418|ref|YP_002373789.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 8801]
 gi|218168896|gb|ACK67633.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           8801]
          Length = 516

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/377 (14%), Positives = 126/377 (33%), Gaps = 36/377 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V   G++        + S   G ++K  V+ G  I  G  +   +D +    +   K  +
Sbjct: 90  VRLLGQVEAGGKA-TLSSQIDGTVQKIVVKEGDVITPGMTVAILDDADANIALAQAKARL 148

Query: 104 KNLRCHIDTEKSA-LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY- 161
              + ++   +      +  + +    A ++RE + L+ L    +    +     + +  
Sbjct: 149 VQEKSNLARLQVGTRPEIIRQREAELTAAQAREREALETLESLIALQPDLIAQRQAELET 208

Query: 162 ---RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
              R  + +  R R   L+     ++ +L+ A  S+       ++        +Q  L  
Sbjct: 209 VKTREKEAQDNRQRIQRLSLEGALSERALVEAKSSADAFRSERIR--------AQAALKA 260

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           QE    K+  E R      K+    I  L  EA             +++  Q   +   +
Sbjct: 261 QETESRKAIAEARTGYDNAKSDRLRIAALLAEAQAGPTQ------EEIQAQQGVVSAANA 314

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            +   +   E+  I + ++G +V ++     +Y + + P++ +V   +   I  ++    
Sbjct: 315 AVEQAKLALERTKIKASVSG-VVQSREADPGDYVEVNDPIVTLV-SDRSLDIFLEIPETL 372

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
              V +G    +        R         +I  ++   + N + Q    V +       
Sbjct: 373 SGQVTEGMRVNL------FARALPNWQKATEITAVVPVANVNSRRQ---LVRV-----TL 418

Query: 399 SDNNIELRNGFPAEVLF 415
           ++    L  G   +   
Sbjct: 419 NNPPKNLLPGMAIQADL 435


>gi|110641571|ref|YP_669301.1| multidrug resistance protein A [Escherichia coli 536]
 gi|191171012|ref|ZP_03032563.1| multidrug resistance protein A [Escherichia coli F11]
 gi|300972029|ref|ZP_07171789.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 200-1]
 gi|110343163|gb|ABG69400.1| multidrug resistance protein A [Escherichia coli 536]
 gi|190908744|gb|EDV68332.1| multidrug resistance protein A [Escherichia coli F11]
 gi|300309251|gb|EFJ63771.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 200-1]
 gi|324011382|gb|EGB80601.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 60-1]
          Length = 342

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/408 (12%), Positives = 121/408 (29%), Gaps = 99/408 (24%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQVENG 75
           + + G++  I W           S G  +          N+  + S  SG I   +V + 
Sbjct: 16  ILLAGVVFFIWW----------VSKGRFIQTTDDAYIGGNITTVASKVSGYISAIEVRDN 65

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  +L  +D +    +   +  IK+ + ++++ ++ +                  
Sbjct: 66  QSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLESIQATIAM---------------- 109

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                  S+ +S       ++     RL    +   L    +  
Sbjct: 110 ---------------------QQSIIQSASETWQAVKHEEQKRLRDTERYEKLAQSAAIS 148

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+ +   +            +  +ER      L  ++ +        ++    +E     
Sbjct: 149 QQIIDNAR-------FDYQQVAAKERKAANDFLVEKQRLAVLSAQEENVRASIEEVLAAL 201

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L ++                         E   + +PI G +    + +  ++ +  
Sbjct: 202 TQALLDL-------------------------EYTLVRAPIDGIVANRSAHT-GSWVEGG 235

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             L+ +VP S+  ++ A     QI  +K G  A +R      ++ + F   IE + P   
Sbjct: 236 TSLVSLVPVSE-LWVDANYKENQIAGMKPGMKAEIRA---DILKGEVFHGHIESLSPATG 291

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   +      T+    V ++I      +    LR G    V  
Sbjct: 292 ASFSLIPIENATGNFTKIVQRVPVRIAFDDAKELKQLLRPGLSVTVSV 339


>gi|289806252|ref|ZP_06536881.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 251

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 84/250 (33%), Gaps = 14/250 (5%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + I   V   G I  +DN   I     G I+   V  G  + +G  L    + +    
Sbjct: 16  YFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNFD---- 71

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                     L+      ++   +L+   + +    +   E  L  L    S  +K    
Sbjct: 72  ----------LQKEYQRYRTQKGYLDKDVNEISFILDKENESGLITLDGTRSLSNKEVKA 121

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            I  V+  ++ K  +  S+      L+ K S     L+   +++ ++  L +K      +
Sbjct: 122 NIELVHSQIRAKELKKTSLDSEISGLQEKLSSKEKELALLAEEINILSPLVKKGISPYTN 181

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              +++   K   E+ +           I  + ++           +S+ + +N +    
Sbjct: 182 FLNKKQAYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLSKIISKNLQELEV 241

Query: 276 EMSKLTILEK 285
             S L ++EK
Sbjct: 242 VNSTLKVIEK 251


>gi|296121850|ref|YP_003629628.1| secretion protein HlyD family protein [Planctomyces limnophilus DSM
           3776]
 gi|296014190|gb|ADG67429.1| secretion protein HlyD family protein [Planctomyces limnophilus DSM
           3776]
          Length = 420

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 119/393 (30%), Gaps = 97/393 (24%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + + P  + + S G I+ E  +  +    SG I +  V+ G+++ +G  L   E  E   
Sbjct: 106 AAVDPEAMVLLSQGYIIPEQQI-LVSPQVSGRIIELNVKEGTRVEKGFVLAKLEPTEYRA 164

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
                           D E +  +    +  + E    +R E++     +          
Sbjct: 165 ----------------DYEGARANVAAAEARLAELREGNRPEEIAQAQAEL--------- 199

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                     K  L ++   +    +L  +  L       ++++    ++L         
Sbjct: 200 -------GEAKATLKQLEQTFRRNAELYGQKIL-------NKQEFEDSESLL---MAQAQ 242

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + E +V                             L    + KE   + E N     
Sbjct: 243 RVLKLEAMV----------------------------KLAEDGFRKERKLEGEANLHKAM 274

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--------PLMKIVPHSK 326
            E+ +    +   +  TI +PI+GTI+   +    N               L  +     
Sbjct: 275 AELER---AKWRLDNCTIAAPISGTILKKNA-EEGNIVNPVAFNGSFSLCDLADL----S 326

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              +   +  + I  V  G    VR   + D        ++ ++ PI  +    +     
Sbjct: 327 KLEVDLTIQERDISKVFPGQKCKVRSEAFPDRAY---DGVVSRLMPIADRAKGAI----- 378

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             V + I+  A  +  + L+    A+V F A  
Sbjct: 379 -PVRVAISVPA-DEEGMYLKPEMSAQVTFYAGK 409


>gi|32472695|ref|NP_865689.1| hypothetical protein RB3730 [Rhodopirellula baltica SH 1]
 gi|32443932|emb|CAD73374.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 430

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 59/382 (15%), Positives = 129/382 (33%), Gaps = 47/382 (12%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL-IDLKKVS 102
           V + G +     ++ + +     + K  VE G  +  GT L+  E +    L + + +  
Sbjct: 75  VMALGTLEPRGGILAVMAAPGDRVSKIYVEPGQDVAAGTVLMDLESLPARQLELSIAQTK 134

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   +  I  E++A +    K  V   + +  E +L D   ++    SK     ++ + +
Sbjct: 135 LDEAKRRIAAERAAGEA---KLQVARSSLKQAESKLSDAQKRFKD--SKADGGELNLLKQ 189

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +  +   R+R +                         +  ++   +  VS+N L+ +   
Sbjct: 190 AADLGQRRLRQLE------------------------SASRDPARQRLVSENALDTEALK 225

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           V +S       + + +  +       D A  E      E+S    +   +      ++ +
Sbjct: 226 VSESQARYESALRDAQEAIDEGRFAVDSAEQEI--RATELSLIAAEQSASLESLKQQIEL 283

Query: 283 LEKTREQKTILSPIAGTI--VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
           L+       +++P  G +  V     +++        LM +   +      A+V    + 
Sbjct: 284 LKFNVATSRLVAPTKGRVLRVDATIGTATGV----SALMHMA-DTSNMVCVAEVNVADLS 338

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI----TDL 396
            V+ G TAT+  P   +    K + I   I          +   + Y   + I     D 
Sbjct: 339 RVEVGQTATITSPALREPLRGKVQRIQSLIAAPTLASPYPMAAVDRYSADVVIAIDSDDS 398

Query: 397 AFSDNNIELRNGFPAEVLFTAK 418
             +   IEL      +V   A 
Sbjct: 399 TSASRLIEL----QVDVEIKAG 416


>gi|87306327|ref|ZP_01088474.1| HlyD family secretion protein [Blastopirellula marina DSM 3645]
 gi|87290506|gb|EAQ82393.1| HlyD family secretion protein [Blastopirellula marina DSM 3645]
          Length = 374

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 64/400 (16%), Positives = 144/400 (36%), Gaps = 35/400 (8%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPI-EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           S +   +  ++ + G +       +    +  SG I  ED    + S   G I +   + 
Sbjct: 2   SSRIAIIAVLVLVFGSLL--AYSQLRHEPLKVSGYIEAEDIR--LGSRVGGRIAEVLADE 57

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FES 133
           G ++ +G  L+  E  +  +        +   +   D +++ LD L   Y V E A  ++
Sbjct: 58  GDRVEKGQILVRLEPFDLNE-------QLAAAKAEQDDKQAILDKLKFGYRVEEVAQAKA 110

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           + +QL   L K      K       +  +    +L   ++ +    ++  K +  +    
Sbjct: 111 KTDQLTARLKKLVDGPRKQEIDAARAELKMASSQLELAQANFKREKEVFEKGAGTQESFD 170

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              +   +++     + V +N+L+             +E I E +  L    + Y+    
Sbjct: 171 ---RVADLLREAESSSVVRENNLSLL------VEGTRQEEIDEARAALDEATQQYELMKS 221

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
            F         D+ Q     A   + +  ++K  E+  I++P    +   +     +   
Sbjct: 222 GFRT------EDIAQAAAAVAAATANVAAIQKRIEELDIVAPSDAIVEALEL-EPGDLMA 274

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            + P++ ++      ++RA V    + +++ G    +    +      +F+  I  I   
Sbjct: 275 PNAPMLTLI-DPNKLWVRAYVPENHL-NIELGQMLPITVDSFD----GEFQGEITFIARN 328

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                NN+QT E     +    +   D   +LR+G  A+V
Sbjct: 329 AEFTPNNVQTPEERSKQVFRIKVTLLDGRDKLRSGMAADV 368


>gi|119488970|ref|ZP_01621905.1| hypothetical protein L8106_19451 [Lyngbya sp. PCC 8106]
 gi|119454926|gb|EAW36069.1| hypothetical protein L8106_19451 [Lyngbya sp. PCC 8106]
          Length = 574

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 126/361 (34%), Gaps = 44/361 (12%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V+I+S  +G I +  VE+G  + +G  +   +       +   + ++   + ++   +
Sbjct: 120 RSVDIRSETAGRITRIFVESGDTVTEGQAIARLKSDNIEAELRRAQANVTRAQANLAQLR 179

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +       + D  E      + +L +      S         ++     L     R  S+
Sbjct: 180 AG--TRPEEIDQAEARLNQAQARLDELKAGTRSEEVAQARARLNQAQARLTD--ARSGSL 235

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL------ 228
                   ++    +A L   ++       L E+ AVSQ++L +  +   + +       
Sbjct: 236 EDEIAQARSRIEANQADLELARERTNRYNQLREQGAVSQDELEEFRQNERRLSATVEESQ 295

Query: 229 ---------------ELRENIHEQKNMLRHIN-----ELYDEANLEFANYLKEISRDLEQ 268
                          +L+  + E++  LR +      E       E A    E+++ L  
Sbjct: 296 RRLQQLQQSQRTQIEQLQSTVEEERQALRQLENGARPEEIALVEAEVAEVQSELNQLLNG 355

Query: 269 NQ--------RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
            +           A+ +++++ LE   E+  I++P  G IV + S    ++  Q   +  
Sbjct: 356 TRPEEIAQAEAEVAEAIAEVSGLEVQLEETAIVAPFTG-IVGDVSGKIGDFLSQGDAITT 414

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +   ++   +R  +  ++   +K G   T+         E      I  I P ++Q    
Sbjct: 415 LT-ENQRLDLRLPIPIERKADLKIGLPVTIS----DPQGEVLATGKISFISPTVNQNSQT 469

Query: 381 L 381
           L
Sbjct: 470 L 470


>gi|146297192|ref|YP_001180963.1| secretion protein HlyD family protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410768|gb|ABP67772.1| secretion protein HlyD family protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 369

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 116/356 (32%), Gaps = 48/356 (13%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++K  +E GS++ +G  +   +        ++ + +++  +   D  +   +    KY
Sbjct: 57  GRVEKIFIEEGSKVKKGDIIAKIDSNLYEIQKNIAQANLEVAKLSADIAEQNWELAKLKY 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +L K                                   K    ++  I  N L L++ 
Sbjct: 117 RLLSK-----------------------------------KPSKYQINQIKENILQLQDI 141

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S     +   ++++  ++ +   N  +   L++ +  +     +     H+  ++   +
Sbjct: 142 KSGNENNIEFLEENIKNLEKMKMANLDTIKLLSELKMQLNSLKAQNSSVTHQINSLENQL 201

Query: 245 NELYDEANLEFANYLKEISRDLE-----QNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
             + +E+  +    + EIS D+      Q           L I      + TI SP+ G 
Sbjct: 202 GMVKNESVTDEDKMITEISVDIAKRNYLQALSYVNMAEQNLKIANLNLRKTTITSPVDGI 261

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           ++         +      + +I        I   V   Q+Q +  G    +         
Sbjct: 262 VLTKGVD-QGQFVGIGTFIAQIGLSDYYLKI--YVPSAQLQKLSLGKKVEIILDS----- 313

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            KK    I  I         N++T+E  + ++ +  +    N   LR G   +V  
Sbjct: 314 NKKAYGEIVFISDKGEFTPRNVETKEEKQKVVFMVKVKIIKNKDILRPGMLVDVKI 369


>gi|148975481|ref|ZP_01812352.1| multidrug resistance protein A [Vibrionales bacterium SWAT-3]
 gi|145964909|gb|EDK30160.1| multidrug resistance protein A [Vibrionales bacterium SWAT-3]
          Length = 359

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 93/286 (32%), Gaps = 28/286 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    + +       N  ++ V   +K  + +           E+      A      +
Sbjct: 90  LVQIDDRDYQATLAQANAHLAVVQSDVKNLIAQQTLQRSKISQAESGVDSAEAEYERAIQ 149

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +   ++L ++N  SQ++++                + +QK  L  + E          +
Sbjct: 150 QVQRSRSLLKRNYASQDEVD--------------SMVAQQKVTLADLEEAKANLVAS-ND 194

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L  I+ ++EQ + +  +  ++    +   E   + +P  G I   +S       Q   P
Sbjct: 195 QLTVIASEIEQAKASVTEAQAQQEQAQLNLEYTKVYAPTDGVI-GKRSVREGLLIQAGAP 253

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           LM +VP +   +I A     Q+  + KG T  V    +     +  + +++   P     
Sbjct: 254 LMSLVP-NNQVWIEANFKETQLSGIHKGQTVEVELDAFP---GQPLEGVVDSFSPATGAK 309

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                 +      T+    V +KIT          L  G       
Sbjct: 310 FALLPPENATGNFTKIVQRVPVKITIPDQQGLKGRLLPGLSVVATI 355


>gi|86359242|ref|YP_471134.1| multidrug resistance efflux protein [Rhizobium etli CFN 42]
 gi|86283344|gb|ABC92407.1| probable multidrug resistance efflux protein [Rhizobium etli CFN
           42]
          Length = 405

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 87/289 (30%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L       +       N  I++   SL     ++     + +  + + + L A +   + 
Sbjct: 132 LATLDNGDYQNALDQANAQIATEQLSLSRIDAQIEGAKASLVQAQAQKTALEATVRGAEI 191

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                 +L  K+  +  DL+     + ++   L            +I  L          
Sbjct: 192 KQKRQSDLQAKSVGTTADLDDANTALDQAKANLAGGDANIVAAQANIAIL---------- 241

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                     + + +      +     +      + +P  G IV N+S    +     Q 
Sbjct: 242 -----EAQRREAEGSVRTLEIQRDKAARDLSFTVLKAPYDG-IVGNRSVQEGDLVSPGQR 295

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           LM +VP  +  YI A     QIQH+  G    V    Y D         +E I P     
Sbjct: 296 LMALVPV-RQLYIDANFKETQIQHLVAGSKVNVHVDAYDDH---PIVGTVESISPASGSV 351

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++I     + ++  LR G    V    +
Sbjct: 352 FSLLPPENATGNFTKVIQRVPVRIALPQDALDSGRLRAGLSVVVDVDTR 400



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 58/167 (34%), Gaps = 19/167 (11%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKN 105
           E ++  I    +G + K  V    ++  G  L T ++        +    I  +++S+  
Sbjct: 101 EGDIATISPKVTGYVAKVNVVANQEVKAGDVLATLDNGDYQNALDQANAQIATEQLSLSR 160

Query: 106 LRCHIDTEKSALDFLNNKYDVLE---KAFESREEQLLDFLGKYHSTCSKV---------F 153
           +   I+  K++L     +   LE   +  E ++++  D   K   T + +          
Sbjct: 161 IDAQIEGAKASLVQAQAQKTALEATVRGAEIKQKRQSDLQAKSVGTTADLDDANTALDQA 220

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
              ++    ++      +  +   R + E     L        +DL+
Sbjct: 221 KANLAGGDANIVAAQANIAILEAQRREAEGSVRTLEIQRDKAARDLS 267


>gi|86749103|ref|YP_485599.1| secretion protein HlyD [Rhodopseudomonas palustris HaA2]
 gi|86572131|gb|ABD06688.1| Secretion protein HlyD [Rhodopseudomonas palustris HaA2]
          Length = 411

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 86/277 (31%), Gaps = 32/277 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              I++   +++    ++ +        + +     A       D    + L  K   S+
Sbjct: 156 RAKIATQQATIERIGRQVTAQESAVEQAQAQRESAEASARRATLDFDRQQALSTKGFASR 215

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
                           + E     ++           A     + ++       + +   
Sbjct: 216 ---------------AVFETSQASRDQGTASVAAAKAAYDAARDNVEVTKAQQNEARAQL 260

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +  S L   E+  +   + +P+ G +  N+  ++ +Y    Q L  IVP S   YI A 
Sbjct: 261 VELQSSLAKAERDLDFTNVRAPVDG-VFSNRMVNTGDYINAGQRLGNIVPLSG-VYIDAN 318

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEV 389
               Q+  +K G T  +    Y+  +    +  ++ + P   Q       +  T  + +V
Sbjct: 319 FKETQLARLKPGQTVDISVDAYSGRK---IEGTVDSLSPAAGQVFTLLPPDNATGNFTKV 375

Query: 390 ILKIT-----DLAFSDNNIELRNGFPAEVLFTAKNTT 421
           + ++          +   + LR G    V       T
Sbjct: 376 VQRVPVRIRVPAEVAREGL-LRAGM--SVYIRVDTRT 409


>gi|282899659|ref|ZP_06307623.1| ABC-transporter DevB family protein [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195538|gb|EFA70471.1| ABC-transporter DevB family protein [Cylindrospermopsis raciborskii
           CS-505]
          Length = 419

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/368 (14%), Positives = 131/368 (35%), Gaps = 21/368 (5%)

Query: 44  VSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIE-TTDLIDLK 99
           V++ G +  E  V+++ +P       ++K  ++ G  +  G  +   +  +     ++  
Sbjct: 47  VTALGRLEPETPVIKLSAPLALDGDRVEKILLQEGDAVKAGQIIAILDSRDKLQSAVERA 106

Query: 100 KVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           +  +   +  +   KS      + ++   +EK     E     ++       ++      
Sbjct: 107 QKQVNVTQAKLKQIKSGAKPGEIQSQKANVEKLKAEYEGNKNAYIQTIARIEAQWQGDRT 166

Query: 158 SSV--YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-LFEKNAVSQN 214
           +     R L  +L   +S Y     L ++ ++  +L+ S + ++   +  L E  A+   
Sbjct: 167 AQEANIRQLAAELKNAKSEYQRYQQLYSQGAVSNSLIDSKRLNVETSEQKLSEARAI--- 223

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                ERI   ++ +L E   +   +     +    A     +  +  + D+   +    
Sbjct: 224 ----LERINTTASKQLAEARVQLNRISATSAKQIRAAEETLNSIAEVRAVDVNLAKTELE 279

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
             +S L   +   E   I +P++G I   +  + +     +  +      ++   + A+V
Sbjct: 280 SAVSVLDSAKTDVESAFIRAPMSGRI--LKIHTRAGEKITASGIADFA-QTEKMSVVAEV 336

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEYYEVILK 392
               I  VK G  A +  P  ++  E     I  +++   + S Q          EV ++
Sbjct: 337 YQTDISRVKIGQKAKIMSPTLSEKLEGNVIQIGLQVNRQNVFSNQPGENLDSRVVEVKIR 396

Query: 393 ITDLAFSD 400
           +T      
Sbjct: 397 LTPQDSKK 404


>gi|193213737|ref|YP_001994936.1| HlyD family secretion protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193087214|gb|ACF12489.1| HlyD family secretion protein [Chloroherpeton thalassium ATCC
           35110]
          Length = 424

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/367 (12%), Positives = 99/367 (26%), Gaps = 75/367 (20%)

Query: 44  VSSSGEI---LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           V  SG +   +       I +   G I K+ V  G+ +  G  +    DI+T        
Sbjct: 63  VIGSGTVTSFVPNARPQSIDAQIDGRIVKWFVNEGAPVAAGDTIAVLRDIDTK------- 115

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                                     L+  F  +   + +   K                
Sbjct: 116 -------------------------FLDTNFVEKNAIIRENTAKEQEL------------ 138

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             S+     ++       L    +    +   ++ +        L  +  + + DL    
Sbjct: 139 --SVIAAEQKVIQARQKHLSAIAQRENTKVGTATARIQYNRALALESEGLIPRKDLELSL 196

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
               K+  +  +   E    LR I     E N +     ++ +  + + +  F +   + 
Sbjct: 197 LKYQKAISDSIKAEAELSIALRTIYAAEAERNAK----ERKANAIIAKAELEFGNVSQRK 252

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                      +++PI GT+V           ++   L  I P +        V      
Sbjct: 253 NAG-------VVIAPIDGTVVRISQAGPGQTVKKGSQLAIIAPETDDIAAEIMVGSLDAA 305

Query: 341 HVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            +  G  A ++F  +  I+           F   +  ID +             Y V++ 
Sbjct: 306 LISPGRPARMQFAGFPAIQFSGWPDMSLGTFGGTVAVIDAVDDGTGR-------YRVLIV 358

Query: 393 ITDLAFS 399
                 +
Sbjct: 359 PDQNDRA 365


>gi|325269235|ref|ZP_08135854.1| hypothetical protein HMPREF9141_1064 [Prevotella multiformis DSM
           16608]
 gi|324988464|gb|EGC20428.1| hypothetical protein HMPREF9141_1064 [Prevotella multiformis DSM
           16608]
          Length = 344

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 98/263 (37%), Gaps = 12/263 (4%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + + L       +T +            + +      ++    +LDLE + + +R  ++ 
Sbjct: 72  DARQLALKRDQLATDNDQLRATHGQFEANRRQLAASRQATVSRQLDLEKQVAAIRQQIAD 131

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q++      LF   A  +  +++ +  +      L++ +   +  +   N    E +  
Sbjct: 132 QQRERKRFDELFRDGAAPRRQVDEIDYQIQV----LKKQLAAAEEQIASQNAALAEQDKG 187

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A  ++ I+          A   ++   ++       + SPI GT++  +      + Q 
Sbjct: 188 IAAQMEGIAAQQAGVDAQQAGVRTQQAQIDDQIAHTFVKSPITGTVLE-KYAERGEFVQA 246

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            +PL K+   +   +IRA +T  Q+++V+ G    V    Y   ++K +  I+  I    
Sbjct: 247 GRPLFKLA-DTVRMFIRAYITSAQLRNVRIGQRVKVM-ADYGKGQKKSYNGIVTWISSRS 304

Query: 375 SQQ-----DNNLQTQEYYEVILK 392
                    ++ +    Y V ++
Sbjct: 305 EFTPKTILTDDERADLVYAVKIR 327


>gi|256419604|ref|YP_003120257.1| secretion protein HlyD family protein [Chitinophaga pinensis DSM
           2588]
 gi|256034512|gb|ACU58056.1| secretion protein HlyD family protein [Chitinophaga pinensis DSM
           2588]
          Length = 375

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/374 (12%), Positives = 115/374 (30%), Gaps = 69/374 (18%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E NV  +    +G +K+ +V++   + QG  L+  +D                      
Sbjct: 60  VEANVSPVIPRVTGYVKEVRVKDNQVVKQGDTLVVLDD---------------------- 97

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                                 R+ Q+     +     ++V    +     +     + +
Sbjct: 98  ----------------------RDLQIKVQQAEAALAAAEV---NVQVAVATTNAARSNI 132

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            S   N   ++ +    +  +    +D     NL + ++++Q    Q       +  +L 
Sbjct: 133 SSSQANISAVDAQIEAGKVNVWRANQDYERYANLIKDHSITQQQYEQALAAKQTAERQLN 192

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               ++K   R  + +  +++          +  +   +    +  ++L   + T     
Sbjct: 193 VLQEQKKVAARQTSAVSTQSDA--------TAEQINAAKAIIKERQAELDNAKLTASYAV 244

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           IL+P  G +            Q  Q L  +V  + +  + A     Q+  +K G   +V 
Sbjct: 245 ILAPENGVVSKIYV-QPGQLVQAGQSLFSVVLSNDVWVV-ANFKETQLDKMKLGQKVSVH 302

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNI 403
              +     K  +  I    P    +      +  +  + +V+    +KI     +   +
Sbjct: 303 IDAFP---GKSLEGKITSFSPATGARFALLPPDNASGNFVKVVQRLPVKIEFNDLNQAEV 359

Query: 404 E-LRNGFPAEVLFT 416
           + LR G    V   
Sbjct: 360 KQLRPGMNVLVDVH 373


>gi|107026809|ref|YP_624320.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116691998|ref|YP_837531.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           HI2424]
 gi|170736008|ref|YP_001777268.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
 gi|105896183|gb|ABF79347.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116649998|gb|ABK10638.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           HI2424]
 gi|169818196|gb|ACA92778.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
          Length = 374

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/363 (11%), Positives = 96/363 (26%), Gaps = 82/363 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V +   +  G PL+  +  +    +   + ++   R  I   ++         
Sbjct: 78  GYVTDVYVRDNQPVKAGDPLVRLDVRQYQVALAQAQATVDARRADIARAEA--------- 128

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                  +  +   +        D + K
Sbjct: 129 --------------------------------------DISQQRANLEQ-----ADAQAK 145

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S + A  +S   + T    L    A +   +   +    ++   L  N          I
Sbjct: 146 VSRINAQHAS--DEYTRYAPLAATGAETHERVADLKSTRDQAAATLAANNASIAAARTQI 203

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                             +  L+Q +       +     +   +   + S +AG +  ++
Sbjct: 204 AS---------------FTAQLQQARAQLEAAQASAAQAQLDLDNTIVRSTLAGRV-GDR 247

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     Y Q    L+ +VP   +  + A     QI +++ G    +      D       
Sbjct: 248 TVRVGQYVQPGTRLLTVVPVDSIYLV-ANFKETQIGNMRIGQPVELHVDALPD---GPLS 303

Query: 365 AIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +++   P        +  +      T+    V ++I   A +     L  G    V   
Sbjct: 304 GVVDSFAPGTGAQFALLPPENATGNFTKIVQRVPVRIRLAANARAQRMLLPGLSVTVDVD 363

Query: 417 AKN 419
            ++
Sbjct: 364 TRS 366


>gi|148263254|ref|YP_001229960.1| secretion protein HlyD family protein [Geobacter uraniireducens
           Rf4]
 gi|146396754|gb|ABQ25387.1| secretion protein HlyD family protein [Geobacter uraniireducens
           Rf4]
          Length = 354

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/321 (13%), Positives = 94/321 (29%), Gaps = 28/321 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           +R  I    S +          +    +  + L+           ++    +     +  
Sbjct: 39  IRSEITQVSSKVSGYVKDVPAEDNTLVAAGDPLVRIEDLEFGVRLELGRKKLEERKAAQL 98

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           +   R R           + +  RA       DL    +LF    VS+ D +       K
Sbjct: 99  VAYNRSRLQDSRIDACTAQLAAARAEQLKKTGDLRRFGSLFPDGIVSELDYDAVVTAEKK 158

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  E    +   K     +  L  E                 + +     +  +L +L K
Sbjct: 159 ARAETGSAVANLKMAESELAALLAEER---------------RLEAELHQQEEELKLLAK 203

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 + SPI G +  N+   +  Y +    L+ ++P + + ++ A     Q+  + +G
Sbjct: 204 ELADTVVRSPITGEV-GNRRVRAGQYVKPGTVLLTVIPRN-VLWVEANFKEVQLSRMHEG 261

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDN 401
              ++    +           +E + P    +         T  + +++ ++        
Sbjct: 262 QPVSIEVDAFPGR---PLTGRVESLSPASGAEYSVLPPENATGNFTKIVQRVPVKIRFQP 318

Query: 402 N----IELRNGFPAEVLFTAK 418
                 ELR G    V    +
Sbjct: 319 GQPLLRELRAGMSVVVSLDTR 339


>gi|116326530|ref|YP_796453.1| lactococcin A ABC transporter permease protein [Lactococcus lactis
           subsp. cremoris SK11]
 gi|116108897|gb|ABJ74022.1| lactococcin A ABC transporter permease protein [Lactococcus lactis
           subsp. cremoris SK11]
          Length = 456

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/377 (13%), Positives = 127/377 (33%), Gaps = 33/377 (8%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E+ + S G++     V +I+ P  G + + ++     + +G  L+  +        +  +
Sbjct: 45  EMIIKSQGQLT-STIVSKIQIPIEGKVLENKLSENLAVKKGETLVKLDLESFKKNKEALE 103

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             I  +   I + ++ ++ LN          E   +  L+ L   +S      N  I + 
Sbjct: 104 QEIPLIENQIKSAETFIESLNKGTSQFTSDDEFGYKNQLESLLAENSANDASLNQSIETH 163

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM---KNLFEKNAVSQNDL- 216
                      +SI L+    + +    + + S+      +      +  +    QN L 
Sbjct: 164 KNEQATYENTKKSIALSIYKKKEERRNWQDIRSAWTSQSNITNFPTEITAQYTTFQNQLK 223

Query: 217 ----NQQERIVYKSTLELRENIHEQKNMLRHINELY----------DEANLEFANYLKEI 262
                ++E++       + E I + +  +  +              +E + +     + I
Sbjct: 224 TSSKEEKEQVKSTVASTINEKIEQIQKEIDQLEMDQSRLTPPVPYSNEISNQGYKKKQSI 283

Query: 263 SRDLEQNQRTFADEMS-------KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            + + + ++              +L+ L+   + + I SPI+G +  N +F       + 
Sbjct: 284 EQAIAETKQKVIGLKESLKKNNIELSELKNQIKNEVIASPISGFVHVNDNFKEQKLIPKG 343

Query: 316 QPLMKIVPH--SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           + + +I P    K     +++    +  VK G     +                 KID I
Sbjct: 344 EVIAEIYPEINDKEIQFTSQIQASDLTQVKTGMKVHFKLDS-KGNDPIMMDG---KIDEI 399

Query: 374 ISQQDNNLQTQEYYEVI 390
                N+ +   +Y + 
Sbjct: 400 AVNATNSERG-TFYLIK 415


>gi|170697932|ref|ZP_02889016.1| secretion protein HlyD family protein [Burkholderia ambifaria
           IOP40-10]
 gi|170137207|gb|EDT05451.1| secretion protein HlyD family protein [Burkholderia ambifaria
           IOP40-10]
          Length = 363

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/371 (13%), Positives = 103/371 (27%), Gaps = 75/371 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    +G + K  V +  ++  G  L+  +  +           +      +D
Sbjct: 61  VGGDVTVLAPKVNGFVDKILVTDNQRVKAGDVLVQLDARDYDA-------KLAQAAAEVD 113

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           + +SA+  L  K  +                                             
Sbjct: 114 SARSAVTELEAKQQL--------------------------------------------- 128

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
              Y          +   A L+    D    + L + +AVS   + + +    K+   + 
Sbjct: 129 --QYAVIGQHAADRNASSAELTRASSDRVRYRELVKSDAVSNQIVERADADYSKADAAVA 186

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   +      ++   +     E  T
Sbjct: 187 RSDAALLASKRQLDVL---------------GAQLADARARVNTALAAQRVAALNVEYTT 231

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +  N++      A    PL+ +VP S   +I A     Q++ ++ G    V 
Sbjct: 232 IRSPVDGYV-GNRTSRVGMLANVGVPLLTVVPASG-LWIDANFKEDQLRKMRAGDRVDVT 289

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN----IELRN 407
               +     +  ++        S       T  + +++ ++      D        LR 
Sbjct: 290 LDASSTRLHGRVDSLAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGIEHVLRP 349

Query: 408 GFPAEVLFTAK 418
           G  A V     
Sbjct: 350 GLSAAVTVHTD 360


>gi|257885418|ref|ZP_05665071.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
 gi|257821274|gb|EEV48404.1| conserved hypothetical protein [Enterococcus faecium 1,231,501]
          Length = 455

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/441 (12%), Positives = 150/441 (34%), Gaps = 37/441 (8%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           + H +  + +    I+ +  +  +      E+ + ++ ++  E  + +++ P    I + 
Sbjct: 15  KQHHSFYRWVLYPVILFLCIIGLFLTFAKKEVVIRTTAQLNPE-KIEKLQVPLEAKIMEN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            ++    + +   L+  +     +     +   + +   I   +  ++ ++   ++    
Sbjct: 74  FLKENQFVHKDDVLVRLDCSLIENEKAQIEQENQRITQQIKMAQLFIESISKGENLFSTD 133

Query: 131 FE-SREEQLLDFLGKYHSTCSKVFNYGISSV---------YRSLKMKLTRMRSIYLNRLD 180
                  QL   L +  S    +    ++            R L+ K+    S       
Sbjct: 134 DSFGYSNQLKSMLSEKESLRYALKQSELNDQKQLEVYEKTKRQLEKKIESSDSKLQEWQQ 193

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEK-NAVSQNDLNQQERIVYKSTLE----LRENIH 235
           ++   S  ++L    ++ +   +N  E+ N VS +  NQ +  +  S  E    L++ + 
Sbjct: 194 VQVAWSNNQSLKDFSKEMMANYENWQEQLNNVSDDQKNQVKLTISASINEQIEQLKKEVE 253

Query: 236 EQKNMLRHI---NELYDEANLEFANYLKEISRDLEQNQRTFADEMSK-------LTILEK 285
           + ++    +       ++   +     +E+ + +   ++T  +   K       L  L+ 
Sbjct: 254 QYQSEKAKLVKPTTSENDRISQTEKGKQELEQAITTVKQTVTELNEKQEKNQSVLKSLDD 313

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQHVK 343
              +  + +P++GT+  N+         +   L +I P          A +   +  ++K
Sbjct: 314 QLSKGILKAPVSGTVHLNEETKGQAELAKGTVLAEIYPIHEKSKMKFTALLPANESNYIK 373

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           +G     +       ++      I+     IS+     +   +Y V   +     +  + 
Sbjct: 374 EGMKVHFKLD-----QKGGAPITIDGTLDEISENSTATEKGVFYAVKGTL----KTTQSF 424

Query: 404 ELRNGFPAEVLFTAKNTTLAQ 424
             R G   E+       T  Q
Sbjct: 425 PFRYGLTGELSLIVGEKTYWQ 445


>gi|294670933|ref|ZP_06735789.1| hypothetical protein NEIELOOT_02637 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307420|gb|EFE48663.1| hypothetical protein NEIELOOT_02637 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 372

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 84/261 (32%), Gaps = 22/261 (8%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +      L  + + L          L + K        ++  L++  R   +      + 
Sbjct: 118 VAQAEAGLAGQQAALNKTAQDKASALAVSKANQAAIDNARAQLDRARREWQRIQAVSADA 177

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRD--------LEQNQRTFADEMSKLTILEK 285
           + +             EA L+ A     +++          E  Q   A+  + L + ++
Sbjct: 178 VSQSSRDAAQTAVKQAEAGLKQAQEQYAVAQQNIINTGVGREGAQAGIANAQALLDLAKQ 237

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 I +P +G  +   S            LM +VP  +     A +    + +VK G
Sbjct: 238 DLGHTVIYAPASGK-LGEVSVKQGQLVSAGTQLMSVVPPERWII--ANIKETDMANVKIG 294

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLA 397
            +A+V          K F   + +I P  + +      +  T  + +++    +KI   A
Sbjct: 295 QSASVSIDALG---GKAFSGKVAEISPATASEFSLIKADSGTGNFVKIVQRIAVKIVFDA 351

Query: 398 FSDNNIELRNGFPAEVLFTAK 418
              +   L  G  AEV    K
Sbjct: 352 GQQDLERLAPGMSAEVNIATK 372



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 53/166 (31%), Gaps = 18/166 (10%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI- 110
              +V  +     G ++K  V +   +  G PL+  +       +   +  +   +  + 
Sbjct: 74  VRGSVTTVSPRVGGYVQKVLVRDFDNVKAGQPLVEIDPAPYRAKVAQAEAGLAGQQAALN 133

Query: 111 -------------DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY----HSTCSKVF 153
                           ++A+D    + D   + ++  +    D + +       T  K  
Sbjct: 134 KTAQDKASALAVSKANQAAIDNARAQLDRARREWQRIQAVSADAVSQSSRDAAQTAVKQA 193

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             G+        +    + +  + R   +   +  +ALL   ++DL
Sbjct: 194 EAGLKQAQEQYAVAQQNIINTGVGREGAQAGIANAQALLDLAKQDL 239


>gi|159026970|emb|CAO86688.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 486

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/364 (12%), Positives = 111/364 (30%), Gaps = 76/364 (20%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           ++G +   + +  +       IK+  V+ G  + QG  L   +D                
Sbjct: 111 ATGSVAAYELIPILSQATGLQIKEIFVDEGDIVSQGQILARLDDT--------------- 155

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                                        + QL         + S++      S    + 
Sbjct: 156 ---------------------------VLQAQLTQAQANVAQSRSRLAELQAGSRKEEIA 188

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                ++ I       ++   L +  +  +Q       +L  + A++++ L++       
Sbjct: 189 RAKQTIQRIKAEISQAQSDWDLAKKRVQRNQ-------SLEAEGAIARDRLDEVLNEERN 241

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
               +++         + + +L      E           + Q      +  S+L I++ 
Sbjct: 242 KAAIVQQTQSRLGEAEQQLAQLQAGNRPEV----------IAQATAQLTEAQSRLAIVKA 291

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              +  ++SP++G I    +    +       L KI+  +    +R +V   Q+  ++ G
Sbjct: 292 QLNETRLISPVSGKIAERNAR-IGDTTNGQNALFKII-ENGRLELRLRVPENQLPLIRVG 349

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
              T+           K    + +I+PI+ +            V + +TD      N  L
Sbjct: 350 APVTITSDA---NSSLKLSGQVREINPIVDEASRQAT------VKVDLTD------NTGL 394

Query: 406 RNGF 409
           + G 
Sbjct: 395 KPGM 398


>gi|251779376|ref|ZP_04822296.1| efflux transporter, RND family, MFP subunit [Clostridium botulinum
           E1 str. 'BoNT E Beluga']
 gi|243083691|gb|EES49581.1| efflux transporter, RND family, MFP subunit [Clostridium botulinum
           E1 str. 'BoNT E Beluga']
          Length = 485

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 58/394 (14%), Positives = 137/394 (34%), Gaps = 75/394 (19%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  S++  GE+   +N   + +    I+K+ +V+ G ++  G  L   +  +  + I+
Sbjct: 65  ANIVNSINVLGEVK-SENSTNVYTNSGNIVKEVKVKVGDEVKTGDVLAILDTEKLKEEIE 123

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
               ++                 N+K D+                     +  +V++  +
Sbjct: 124 QLTETLNASEA------------NSKLDL--------------------DSKKRVYDNIV 151

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                +L   L          ++  +     +  L   ++     K +     +S  +L 
Sbjct: 152 YINENNLNTDL----------INANSMLETAKMTLEDAERLYQYNKTILGYGEISNQELK 201

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E    K+  +  +   E +N    I E     +L+ A    E ++   +N+       
Sbjct: 202 KSENDYNKAKDDYNKANVELENSKLKIQE-----DLKNAQNSYESAKIAYENKSERVALE 256

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +K    +K  ++ TI +P+ GTI    + +  +    +  L KI        I+A +   
Sbjct: 257 NK----KKELDECTIKAPVDGTITTINA-TVGS--PSTGTLFKI-EDLNNLIIKASIKEV 308

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----------SQQDNNLQTQEY 386
            I + K G   T++     D+   +    + +I+P             + +  +      
Sbjct: 309 DIANAKVGQKTTIKTDAIEDL---ELLGEVSEINPTAKSGEISVPAAGNAESTSSNGDVT 365

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           ++  +KI +    + NI++  G  A++    +  
Sbjct: 366 FDAKVKINEQ---NENIKI--GMKAKLNIILEEK 394


>gi|297616913|ref|YP_003702072.1| secretion protein HlyD [Syntrophothermus lipocalidus DSM 12680]
 gi|297144750|gb|ADI01507.1| secretion protein HlyD family protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 331

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/400 (13%), Positives = 122/400 (30%), Gaps = 85/400 (21%)

Query: 23  LSIIGIIGLITWS--ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           ++ +G+   + +      P    + +SG I      +  K+   G+I+   V+ G  + +
Sbjct: 11  VTALGVGTFLAYEHYYSSPQNTGIQASGTIEATTAELTAKAA--GVIEYVTVKEGDHVQK 68

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G  +            +L +  +   R     E+ AL  L  K             QL D
Sbjct: 69  GQLV-----------AELSRNDLVAQR-----ERDALSVLKAK------------AQLRD 100

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                                                         + +A L    +DLT
Sbjct: 101 LTSGAREEEIAEAAAN----------------------------VEIAKASLKQATEDLT 132

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             + L++  A+++++L + +        +L+      + +                    
Sbjct: 133 KREELYQAGAITKDELEKFQTAQAIEKQKLQAAEARLRLLKAGSR--------------- 177

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
             S  + Q +       + L   E       + SPI G ++  +++    Y Q    L  
Sbjct: 178 --SEQITQAELEVKRCEAVLKATEAMIRDLKVFSPIDGVVLN-RNYEPGEYVQAGASLAT 234

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ-QDN 379
           +   +   +I+  +    +  ++ G    +      ++   +   I  + +      Q  
Sbjct: 235 VANLND-LWIKVYIPTDDLPAIRLGQEVKITVSGSPEVFTGRVTYIASRGEYTPKMIQTK 293

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +T   + V + +      + +  L+ G PA+V+F    
Sbjct: 294 KERTNVVFAVKISVD-----NKDGVLKPGMPADVVFDGGK 328


>gi|119773542|ref|YP_926282.1| HlyD family secretion protein [Shewanella amazonensis SB2B]
 gi|119766042|gb|ABL98612.1| HlyD family secretion protein [Shewanella amazonensis SB2B]
          Length = 348

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 106/327 (32%), Gaps = 31/327 (9%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            +++ + S L        V  +  +++       L K   +  +       +   S+  +
Sbjct: 36  AYVEADISQLSVKVPGLVVQSEVQDNQYVTAGTLLAKLDDSEFRARVLQSEARLASVGAE 95

Query: 168 LTRMRSIYLNRLDLENKS----SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L  + +  L +  L  ++        A +   Q+ LT    L  ++  SQ+D+++     
Sbjct: 96  LATLEAKLLLQASLIAQAKAGVQATEADVRRVQQQLTRASELRRRDYSSQDDVDRLTAEF 155

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +   L E+        + +  L  +    FA                 A+  + L + 
Sbjct: 156 DGAEARLAESRASLAAREQELGVLKAQREQLFAAR---------------AEANAGLELA 200

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +   +   I +P  G +    +F    Y Q  Q L  +VP     +I A     QIQ + 
Sbjct: 201 QLQLKDTEIRAPFNGIVGKRGAF-VGQYVQPGQALFSLVP-DGTVWITANFKETQIQAMV 258

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DL 396
            G    V    + D     F  +I+ + P    +         T  + +++ +I     L
Sbjct: 259 PGQPVAVSLDAFPDH---DFHGVIDSLSPASGAKFSLLPAENATGNFTKIVQRIPVRIRL 315

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLA 423
                  ++  G  A V      T   
Sbjct: 316 ELPPGEQKVVPGLSAVVSVDTAATPAL 342


>gi|209524587|ref|ZP_03273135.1| efflux transporter, RND family, MFP subunit [Arthrospira maxima
           CS-328]
 gi|209495045|gb|EDZ95352.1| efflux transporter, RND family, MFP subunit [Arthrospira maxima
           CS-328]
          Length = 524

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/316 (10%), Positives = 105/316 (33%), Gaps = 28/316 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V +G  + QG  +      +    +   + ++   +  +   ++         
Sbjct: 132 GRITQVYVRSGEMVNQGQAIARLRSDDLEAQLRQAQANLVRTQARVSELQAG-------- 183

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   SR E++ +   +   + +++ +    S+   +     ++ +        E +
Sbjct: 184 --------SRPEEIAEARARLGESIARLSDAESGSLLAEINQAKAQIDANIAAAELAEKR 235

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  + L  +          L  +   +Q +L   ER + +     +  I  ++  +   
Sbjct: 236 VTRFQELTEAGAISRDEFDALVSQKQTAQANLRASERRLEQLQQNRQSEIALRQAGVEQS 295

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +                 ++++Q +   A+  +++  LE   ++ T+ +P  G +    
Sbjct: 296 EQALRRLESGTR------PQEIDQAEAQVAEAAARVRQLEVQLQETTVQAPFTGIVGDVT 349

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +    ++  + + L  +   +    +R  +  ++   +++G    ++        E    
Sbjct: 350 AR-PGDFVSRGETLTTLT-ENDRLELRLSIPLERQGDLREGLAVEMQ----DPQGEPIGT 403

Query: 365 AIIEKIDPIISQQDNN 380
             I  I P +     +
Sbjct: 404 GRISFISPTVDPNSQS 419


>gi|171321364|ref|ZP_02910320.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MEX-5]
 gi|171093362|gb|EDT38554.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MEX-5]
          Length = 363

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/371 (12%), Positives = 104/371 (28%), Gaps = 75/371 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    +G + K  V +  ++  G  L+  +  +    +      +   R  + 
Sbjct: 61  VGGDVTVLAPKVNGFVDKILVTDNQRVKAGDVLVQLDARDYDAKLAQANAEVDGARAAV- 119

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                               E++++     +G++ +  +                     
Sbjct: 120 -----------------TELEAKQQLQYAVIGQHAADRNASSAE---------------- 146

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                               L+    D    + L + +AVS   + + +    K+   + 
Sbjct: 147 --------------------LTRASSDRVRYRELVKSDAVSNQIVERADADYSKADAAVA 186

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   +      ++   +     E  T
Sbjct: 187 RSDAALLASKRQLDVL---------------GAQLADARARVNTALAAQRVAALNVEYTT 231

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +  N++      A    PL+ +VP S   +I A     Q++ ++ G    V 
Sbjct: 232 IRSPVDGYV-GNRTSRVGMLANVGVPLLTVVPASG-LWIDANFKEDQLRKMRAGDRVDVT 289

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN----IELRN 407
               +     +  ++        S       T  + +++ ++      D        LR 
Sbjct: 290 LDASSTRLHGRVDSLAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGIEHVLRP 349

Query: 408 GFPAEVLFTAK 418
           G  A V     
Sbjct: 350 GLSAAVTVHTD 360


>gi|221210945|ref|ZP_03583925.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD1]
 gi|221169901|gb|EEE02368.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD1]
          Length = 363

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/371 (13%), Positives = 104/371 (28%), Gaps = 75/371 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    +G + +  V +  ++  G  L+  +  +           +      +D
Sbjct: 61  VGGDVTVLAPKVAGFVDRILVTDNQRVKAGDVLVQLDARDYAA-------KLAQASAEVD 113

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +SA+  L  K                                      + L+  +   
Sbjct: 114 AARSAVAELEAK--------------------------------------QQLQAAVIGQ 135

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +   N    E         L+    D    + L + +AVS   + + +    K+   + 
Sbjct: 136 HAADKNASSAE---------LTRAAADRVRYRELVKADAVSNQLVERADADYAKAHAAVE 186

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   +      ++   +     E  T
Sbjct: 187 RSDAALLASKRELDVL---------------GAQLADARARVNTALAAQRVAALNVEYTT 231

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P+ G +  N++      A    PL+ IVP S   +I A     Q++ ++ G    V 
Sbjct: 232 IRAPVDGYV-GNRTGRVGMLANVGVPLLTIVPASG-LWIDANFKEDQLRKMRAGDRVDVS 289

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIE--LRN 407
                     +  ++        S       T  + ++   + +         +E  LR 
Sbjct: 290 LDASGARLHGRVDSVAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGLEQVLRP 349

Query: 408 GFPAEVLFTAK 418
           G  A V     
Sbjct: 350 GLSAVVTVHTD 360


>gi|239834833|ref|ZP_04683161.1| protein secretion protein [Ochrobactrum intermedium LMG 3301]
 gi|239822896|gb|EEQ94465.1| protein secretion protein [Ochrobactrum intermedium LMG 3301]
          Length = 347

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/375 (13%), Positives = 105/375 (28%), Gaps = 81/375 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N   I S  +G +    V +   +     L   +D              ++ R  + 
Sbjct: 45  VRGNTTAIASKVTGYVTVVDVADNQYVRANDVLFRIDD--------------RDFRARLA 90

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ ++      D +E                                          +
Sbjct: 91  QAEANVEAAQAHIDNVE----------------------------------------AEI 110

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +  ++       +     A L+   K     + L   N+VS+  +++ +    K+   L 
Sbjct: 111 QLQHILVKQATAQKRAAEADLALAVKASQRQRELVRTNSVSRAQVDESDAARSKAEAGLL 170

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 +     I  L  +     A  L          Q   A +++++       +   
Sbjct: 171 GAKAAVEAQETRIKVLTTQKEAALAAVL----------QARAARDLARI-----DLDNTV 215

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P  G I  N+             L+ +VP   +  + A     QI+ ++ G +A V 
Sbjct: 216 VRAPFDGVI-GNRQVRVGRLVSPGASLIDLVPIKDVWIV-ANFKETQIESIQPGQSAQVT 273

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNI--E 404
              Y  I     +  ++   P           +  T  +  V+ ++   +    N I   
Sbjct: 274 VDAYPGII---IEGKVDSFAPGSGSAFSLLPADNATGNFVRVVQRVPVKIKLVQNPIPGR 330

Query: 405 LRNGFPAEVLFTAKN 419
           L  G  A V     +
Sbjct: 331 LVPGLSARVQIILGS 345


>gi|158334172|ref|YP_001515344.1| secretion protein HlyD [Acaryochloris marina MBIC11017]
 gi|158304413|gb|ABW26030.1| secretion protein HlyD, putative [Acaryochloris marina MBIC11017]
          Length = 394

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/345 (11%), Positives = 110/345 (31%), Gaps = 48/345 (13%)

Query: 38  LPIE-ISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
            P+E  +VS+ G +  +  +V++ +P       + +  V+ G  +  G  +   +     
Sbjct: 51  APLEIKTVSALGRLEPQGELVQLSAPSSAEGNRMSQLLVKEGEAVSSGQIIAILD----- 105

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                                 + D L       ++     E +L               
Sbjct: 106 ----------------------SRDRLQADLQTAQEQVRVAEAELARIKAGAKQGELAAQ 143

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              I+ +    + ++T   +    R           A + +   +    ++L+++ A+S 
Sbjct: 144 RAEIARLDAQRQGEMTAQSATIARR----------HAEVDNALAEFNRYQSLYQQGAISA 193

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           ++ +Q++ ++  +   L+E       +    +     A        +    D+   Q   
Sbjct: 194 SERDQKQLVLQTAQRSLQEAQAVANRLQAVQSPELVAARARLNQIAEVRPVDVNVAQANI 253

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               + +   +   +Q  I +P +G ++   +            ++++   ++  Y  A+
Sbjct: 254 NQARASVKQAQARLDQAYIKAPQSGVVLDIHTH-PGEVVGT-DGILELG-QTQQMYAVAE 310

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           V    ++ +K G    V                ++++   + +Q 
Sbjct: 311 VYQSDVRKIKTGQAVKVNSEALPQS----LSGTVDRVSTKVRRQT 351


>gi|56750977|ref|YP_171678.1| hypothetical protein syc0968_d [Synechococcus elongatus PCC 6301]
 gi|56685936|dbj|BAD79158.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 450

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/388 (12%), Positives = 130/388 (33%), Gaps = 81/388 (20%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++  V++SG I+     V +    +G++ +  VE G ++ QG  +   ++ E        
Sbjct: 62  LQEKVTASGSIVPI-RTVNLSPKTAGLLVEVLVEQGQKVQQGQLIARMDNRELRAQQLQA 120

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++   +  +   ++                                T  +V + G  +
Sbjct: 121 RAALAAAQAQLQVLRNG-------------------------------TRPEVLDQGREA 149

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           + ++            L + +L+ +                  + L  + A+++   ++ 
Sbjct: 150 IRQAQAAAQQAAARRALAQQELKRQ------------------EALVGEGAIARQAYDRA 191

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                ++   L++ I   + + R   EL + A  E          ++ Q +    + + +
Sbjct: 192 LTDAAETDAALQQAIGWLREVERRQQELQNGARPE----------EVRQAEARVGEAIGR 241

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--------IVPHSKLTYIR 331
           L  +E       I +P +G I   +      +   +             IV  ++   + 
Sbjct: 242 LQSVEVQLADTEIRAPFSGIITQ-RYADPGAFVTPTTSASATASATSTSIVALAEGLEVL 300

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A+V    I  ++ G +  VR   +     + F+  +  + P   ++ N       ++V +
Sbjct: 301 AQVPEVDISRIRVGQSVQVRVDAFP---TQTFEGKVRLVAPEAVEEQNVTS----FQVRV 353

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
                       +L +G  A++ F  ++
Sbjct: 354 -----TLQTGQNQLGSGMNADLDFIGRS 376


>gi|120586939|ref|YP_961284.1| secretion protein HlyD family protein [Desulfovibrio vulgaris
           subsp. vulgaris DP4]
 gi|120564353|gb|ABM30096.1| secretion protein HlyD family protein [Desulfovibrio vulgaris DP4]
          Length = 353

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/385 (11%), Positives = 115/385 (29%), Gaps = 102/385 (26%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V +SG +      + +    SG+I    V  G ++ +G PL    +        ++K  +
Sbjct: 49  VVASGIVEPVTKELVLGFETSGVIDTVFVAEGDKVEKGQPLARLRN-------GMEKAQL 101

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  + +    +                        ++F    + +  +     ++   R+
Sbjct: 102 EEAQANALAAR------------------------MEFEKLTNGSRPEEKGEALAQERRA 137

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                                      +   ++ + T  + L++++A+S+ DL + +R +
Sbjct: 138 F-------------------------KVYEQYRDEATRRQRLWQQDAISREDLERAQRDM 172

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +  E      + K +                        D+ +     A   S + + 
Sbjct: 173 DVARQEYVAATQQLKLVEDMYR-----------------REDVAKAGYQLAAADSAVGVA 215

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSN----------YAQQSQPLMKIVPHSKLTYIRAK 333
               E+  + +P++GT+   +                                   +RA+
Sbjct: 216 RAALERMELRAPVSGTV--LRVHGEPGEVFSLFAPSPVISVGDI--------SALNVRAE 265

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIRE-KKFKAIIEKIDPIISQQDNNLQT--QEYYEVI 390
           V  + I  ++ G  A VR   Y   +   K   ++  + P   +  N  +   +   EV+
Sbjct: 266 VDERDIGRIRVGQVAFVRADAYGSEKFNGKVGRVVLSLTPKRLRTGNPSEPVDRSVLEVL 325

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF 415
           + +           L +G   +   
Sbjct: 326 IALDAPG------PLVSGLRVDAFI 344


>gi|303247757|ref|ZP_07334026.1| secretion protein HlyD family protein [Desulfovibrio fructosovorans
           JJ]
 gi|302490841|gb|EFL50740.1| secretion protein HlyD family protein [Desulfovibrio fructosovorans
           JJ]
          Length = 361

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 60/382 (15%), Positives = 125/382 (32%), Gaps = 75/382 (19%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N+V+I    SG I +  V +   + +G  L   +               +  +  +D
Sbjct: 40  VRANIVQIAPRVSGPIVQLPVIDNQFVHKGDVLFEIDP--------------RTYQAALD 85

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ LD   ++ + LE   +S E  L        +    V                   
Sbjct: 86  QARANLDKTRDEIENLEAQVKSAEAALEQSRTTVRNASFGV------------------- 126

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                         +  +A      KDL   K L +   +++ D +    +  +S +  +
Sbjct: 127 --------------TSAKAHSEEVHKDLGRNKTLVDNGTIARRDFD----LSQESAITAQ 168

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++++ +  L        +A  E A     +     +N     + +++    +   E   
Sbjct: 169 ASLNQAEAQLDKAGAAKLQAGAELARAKAALGAP-GENNPHLREAVAQWEQAKLNLEFTK 227

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P+ G +         + A  +QPL+ +V  ++  ++        I +++KG  A V 
Sbjct: 228 VRAPVNGYVTNLNLR-LGSQAVANQPLLALV-DTESFWVAGYFRETVINNIRKGDKAVVT 285

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ---------------EYYEVILKITDL 396
              Y +        ++E I   I+Q D +                   +   V + IT  
Sbjct: 286 LMSYPET---PLPGVVESIGQGIAQDDGSTGQDLLPTISPTFEWIRLAQRVPVRVHITK- 341

Query: 397 AFSDNNIELRNGFPAEVLFTAK 418
                ++ LR G  A VL   K
Sbjct: 342 --KPRDVALRVGTTASVLVLTK 361


>gi|294340504|emb|CAZ88888.1| putative Secretion protein HlyD [Thiomonas sp. 3As]
          Length = 345

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/358 (12%), Positives = 105/358 (29%), Gaps = 88/358 (24%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G + +  V+ G  + +G  +   + +   D ++                ++    L  
Sbjct: 54  DAGRVSELLVQEGDAVRKGQVVARIDAVRYQDAVN----------------RAQAALLAQ 97

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  + +    SR +++ +      +  +   N   +                        
Sbjct: 98  QNVLAKLKAGSRPQEIAEARAGVDAALAAQANAKAT------------------------ 133

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                               K L E   + +  L+   + +  +   ++         ++
Sbjct: 134 ----------------YARQKTLVESGFLPRQSLDNVTQQLDTAAAGVQRARQALSLAVQ 177

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              +                  D+   +     + S L + ++      + SP  G +V 
Sbjct: 178 GPRK-----------------EDIAAAEAMVKADESALALAQRQLTDAVLYSPENG-VVE 219

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           N+     + A    P+M I   +   ++RA V   ++  +  G  A +    +     + 
Sbjct: 220 NRILEVGDMAAPQTPVMTIA-VNNPVWVRAYVPETELGKIAPGMRADILTDSFP---GQP 275

Query: 363 FKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           FK  +  I P       S Q   L+ Q  Y V +        + + +LR G P  V  
Sbjct: 276 FKGWVGNISPTAEFTPKSVQTTELRAQLVYRVRV-----YACNPDQKLRLGMPVTVQV 328


>gi|186681760|ref|YP_001864956.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186464212|gb|ACC80013.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 401

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/331 (13%), Positives = 112/331 (33%), Gaps = 47/331 (14%)

Query: 43  SVSSSGEILNEDNVVEIKSPF--SGI-IKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++++ G +  +  V+ + +P    G+ + K  V  G ++ QG  +   +           
Sbjct: 63  TIAALGRLEPQGEVIRLSAPESQGGVRVTKLMVNKGDKVRQGQVVAMLDS---------- 112

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
                                   Y     A E  ++Q+L      +   +      IS+
Sbjct: 113 ------------------------YFPRLAALEKAQQQVLVAQASLNQVKAGAKAGDISA 148

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
              ++      +R     +   E   + L+A   + + +    + L++  A+S +D + +
Sbjct: 149 QKATIARLEAELRGETSAQ---EATIARLQADWRNAESENQRYQQLYKDGAISASDADTK 205

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
              V     +L E     K  +  + +   EA     +  +    D+   Q    + ++ 
Sbjct: 206 RLRVDTVQQQLNEAKASLKRSIETLQKQLIEAKARLKSIAEVRPTDIAAAQADVENALAS 265

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           +   +   +   + SPI G I   +  +       +  +  +   ++  Y+ A+V    I
Sbjct: 266 VNQAKAEWDLSIVRSPITGQI--MKINTWPGEIIGTTGIADLG-RTQQMYVVAEVYETDI 322

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           + V+ G +A +           K +  +  I
Sbjct: 323 KKVRIGQSAIITSDALP----GKLRGKVTDI 349


>gi|170699455|ref|ZP_02890499.1| secretion protein HlyD family protein [Burkholderia ambifaria
           IOP40-10]
 gi|170135655|gb|EDT03939.1| secretion protein HlyD family protein [Burkholderia ambifaria
           IOP40-10]
          Length = 373

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/362 (10%), Positives = 87/362 (24%), Gaps = 82/362 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V +   +  G PL+  +       +   +V++      +D  ++         
Sbjct: 77  GYVTDVYVRDNQVVKAGDPLVRLD-------VRQYQVALAQSTATVDARRA--------- 120

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                  +      +     N    E +
Sbjct: 121 --------------------------------------DIARAEADISQQRANLEQAEAQ 142

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + + R        +      L    A +   +   +    ++   L  N          I
Sbjct: 143 AKVSRINARHASDEYARYAPLAATGAETHERVADLKSTRDQAAATLTANNASIAAARTQI 202

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                             +  L+Q +       +         +   + S + G +  ++
Sbjct: 203 AS---------------FTAQLQQARAQLEAAQASAAQARLDLDNTIVRSTLDGRV-GDR 246

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     Y Q    L+ +VP   +  + A     QI  ++ G    +      D       
Sbjct: 247 TVRVGQYVQPGTRLLTVVPVDAIYLV-ANFKETQIGRMRIGQPVELHVDALPDDT---LS 302

Query: 365 AIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             ++   P        +  +      T+    V ++I   A +     L  G    V   
Sbjct: 303 GTVDSFAPGTGAQFALLPPENATGNFTKIVQRVPVRIRLAANARAPRMLLPGLSVTVDVD 362

Query: 417 AK 418
            +
Sbjct: 363 TR 364


>gi|301164081|emb|CBW23637.1| putative HlyD-family secretion protein [Bacteroides fragilis 638R]
          Length = 355

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 110/359 (30%), Gaps = 87/359 (24%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNK 123
           G IK+ +      +  G  LL  +D              +  R  + D E + +D L +K
Sbjct: 67  GYIKEVRFTEHQYVHAGDTLLILDD--------------REYRIRLKDAEAALMDALGSK 112

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                      +V N GI              R+  +N    E 
Sbjct: 113 ---------------------------EVLNSGI--------------RTSGVNVAVQEA 131

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +   A LS  + +L     L +K AVSQ D    +     +       + +++     
Sbjct: 132 NIAETLARLSQQEAELNRYTRLLKKQAVSQQDYELAKANFEATRARYNALLRQKEAAQSQ 191

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            +E    +    AN L++                + L + +       + +P  G     
Sbjct: 192 YSETSKRSTGAEANILRK---------------EADLEMAKLNLSYTVVTAPYDGY-TGR 235

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     + Q  Q L  +V  +   ++ A     QI H+  G    ++   ++      F
Sbjct: 236 RTLEPGQFVQGGQTLSYLVRGNDK-WVTANYKETQIAHIYIGQKVRIKVDAFSGRT---F 291

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +  I           P  +   N ++ Q+   V + + D +  +    LR G   E
Sbjct: 292 HGTVTAISEATGSKYSLVPTDNSAGNFVKVQQRIPVRIDLNDASPEEMEC-LRAGMMVE 349


>gi|110803265|ref|YP_697649.1| antibiotic ABC transporter [Clostridium perfringens SM101]
 gi|110683766|gb|ABG87136.1| putative bacteriocin ABC exporter accessory factor [Clostridium
           perfringens SM101]
          Length = 324

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/273 (19%), Positives = 112/273 (41%), Gaps = 27/273 (9%)

Query: 11  RNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            + P  L  + L  II  I+    WS     EI V  +G +  ++ +  + +   G ++ 
Sbjct: 2   ESKPNKLMFIFLYIIIALIVTFFIWSWFSEKEIIVKVNGVVRPDNEIKAVSNIVQGEVES 61

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            +++NG  + +G  L   +  E    ++ KK  I     +I+T+   L+ LN   +    
Sbjct: 62  VKMKNGESVSKGEVLFKIKSTE----LENKKNQIDEQIEYINTDNENLEKLNKSINDNTN 117

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            FE+ +++             K + Y   S     K+      +I+ ++ +L N+   L 
Sbjct: 118 YFENNDKE-------------KEYYYKFQSYEAGNKVSFEEKNNIFSSKDELNNQKVELE 164

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            L  S  ++    KNL ++     +  + Q      S   ++  I + +N  + +NE  +
Sbjct: 165 TLSKSISEN----KNLNKEG----STYSDQYESYISSREMIQNKIEQLENNKKALNEKIE 216

Query: 250 EANLEFANYLKEISRDLEQNQ-RTFADEMSKLT 281
           E N E      E  + +  ++ +   +++S++ 
Sbjct: 217 ENNKEKNKLNDENRKTIIDDKDKQINNQISQID 249


>gi|15672062|ref|NP_266236.1| lactococcin A ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
 gi|56404662|sp|Q9CJB7|LCNDL_LACLA RecName: Full=Lactococcin A secretion protein lcnD-like
 gi|12722923|gb|AAK04178.1|AE006246_8 lactococcin A ABC transporter permease protein [Lactococcus lactis
           subsp. lactis Il1403]
          Length = 473

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/445 (15%), Positives = 155/445 (34%), Gaps = 50/445 (11%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           +G + ++     E++V S+G I     V +I+S  +  I +  ++ G  + + + LL + 
Sbjct: 33  VGGVIFTFFAHKELTVISTGSIEPTKIVAKIQSTNANPIIENNLKEGKVVKENSLLLKYN 92

Query: 89  DIETTDLIDL---KKVSIKNLRCHIDTEKSAL-----DFLNNKYDVLEKAFESREEQLLD 140
                  +     +K  + + +  +D  + +L     +F        EK+FE+ E Q+  
Sbjct: 93  GTPEQTQLSELLTQKKQVLDKKAQLDLLQKSLTNEKNEFPTTDSFGYEKSFENYESQVKS 152

Query: 141 FLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLDLEN--------------- 183
                  +   V +   S  S  ++++ ++  ++    N  ++EN               
Sbjct: 153 LEATIQKSNQAVEDQNKSTESQKQAIQNQVATLQQAIQNYSEIENAVSSGGGVSQDNPYL 212

Query: 184 -KSSLLRALLSSHQKDLTMMKN---LFEKNAVSQNDLNQQE--RIVYKSTLELRENIHEQ 237
            + +  +A  ++ + DL   KN     ++   SQ +  + +    +  S   L+  I   
Sbjct: 213 SQYNSYQAQQATLEADLKNQKNPDETAKQATKSQEESLKSQFLSGLASSKDSLKSQIQSF 272

Query: 238 KNMLRHI-------NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                 +       N    +        L   ++++     T  D  +K+++ ++  +  
Sbjct: 273 NVQESSLTGSNAYDNSQSSQILTLKTQALSASNKEMTDLNSTLTDLETKISLQKQDDQYS 332

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYT 347
            + +   G +                P+ +I P         + + +   QI  +K G  
Sbjct: 333 QVFAEQTGVLHVLPDILGMKKIPIGTPIAEIYPLLKAETQVNLTSYIPSTQISGMKVGQK 392

Query: 348 ATVRFPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
             VRF    ++ + +    II++ID          +    Y+V       A    N  +R
Sbjct: 393 --VRFTVQQNLPKPEILTGIIKQIDS----APTAFKEGNAYKVSATTAINAKDLPN--IR 444

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPIT 431
            G   + +      T     +  I 
Sbjct: 445 YGLQGKTVTIIGKKTYFNYFLDKIM 469


>gi|75909073|ref|YP_323369.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75702798|gb|ABA22474.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 489

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/359 (11%), Positives = 116/359 (32%), Gaps = 38/359 (10%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +++SG+++   +V  +     G++ +  VE G ++ QG  +   +  E    I   + +I
Sbjct: 65  ITASGKVVPVQSV-NLSPKNPGVLAQLYVEQGDRVEQGQIIARMDVGEIEAQIAQYRANI 123

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +D  ++                 +R +++     +     +++      +  + 
Sbjct: 124 AQAQAQLDEARAG----------------NRPQEIAQSKARLAQAQAQLAESVAGNRPQE 167

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +    +++ +          +    + L +   +   +      ++  ++ +L + ++ +
Sbjct: 168 VAKAQSQVDAAQARVNYTSEQVKRYQYLFNQGAERKQLFDQAVSEDKSARANLAEAQKQL 227

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                  R  +         + E      L       E   ++ Q Q       ++L   
Sbjct: 228 SLLQSGTRSEV--ISAKEAAVTEARAALVLSQEGSRPE---EIAQRQAAVKAAQAQLAAA 282

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYIRAKVT 335
           +       I +P +G +    S     +           S     IV  ++   I A+V 
Sbjct: 283 QVRLADTIIRAPFSGIVTQKYSN-VGAFVTPTTSASTSASATSSSIVALARGVEILAQVP 341

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
              I  +K+G    +    Y D     F+  +  I P    +         ++V + I 
Sbjct: 342 EADIGRIKQGQQVEIVADAYPDE---VFQGRVRLIAPEAVIEQGVTS----FQVRVAID 393


>gi|238925409|ref|YP_002938926.1| hypothetical protein EUBREC_3064 [Eubacterium rectale ATCC 33656]
 gi|238877085|gb|ACR76792.1| Hypothetical protein EUBREC_3064 [Eubacterium rectale ATCC 33656]
          Length = 376

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/266 (11%), Positives = 94/266 (35%), Gaps = 7/266 (2%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +   +  NR   E + S    L+ S + D          + +  +     +  V ++ ++
Sbjct: 103 QQTQLEDNRKSYEEQISQYSLLIKSIKDDTNYFDETKADDGLYWSLFETYKSQVEQNKVD 162

Query: 230 LRENIH---EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           +          + +   +     + +  + + ++     +E+     A   ++L  +   
Sbjct: 163 VSTYQAYGYTDEQIQAQLETNQGKIDEVYYSAIQSAETKIEEANLQIASIDAQLAAVTSG 222

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           ++   + +  +G +    ++ S    Q +  +  I P +   Y+ A V+   +  + +G 
Sbjct: 223 QDAYEVKATTSGVLHMLGNYKSGMVVQTTTTVATITPENSQRYLEAYVSTSDMARMHEGD 282

Query: 347 TATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYYEVILKITD---LAFSDNN 402
              V     +          + +ID  + +Q+  +  T   ++V++ +     L+   + 
Sbjct: 283 RVQVVMDGLSQNVYGTISGSVSRIDSNVTTQEGQDGATSRAFKVMIVLDQDYVLSREGDK 342

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIH 428
           +++ NG  A         T    ++ 
Sbjct: 343 VDVTNGMTAAARIQYDKVTYFNYVLE 368



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 73/205 (35%), Gaps = 14/205 (6%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +N PA    +  +  + +I  + WSI  P   ++ + G + N+++   + S    ++   
Sbjct: 20  KNPPAFGYILITVVAVFLIVAVVWSIKTPKVYTIQAQGTVTNDESNYVMCSYTGELLDS- 78

Query: 71  QVENGSQILQGTPLLT-------FEDIETTDLIDLKKVSIKNLRCHIDTEKSA---LDFL 120
            +E G+ +  G  L T        +  +  D     +  I      I + K      D  
Sbjct: 79  NMEEGALVEAGDVLFTIKSTDYDLQQTQLEDNRKSYEEQISQYSLLIKSIKDDTNYFDET 138

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                +    FE+ + Q+     K   +  + + Y    +   L+    ++  +Y + + 
Sbjct: 139 KADDGLYWSLFETYKSQV--EQNKVDVSTYQAYGYTDEQIQAQLETNQGKIDEVYYSAIQ 196

Query: 181 -LENKSSLLRALLSSHQKDLTMMKN 204
             E K       ++S    L  + +
Sbjct: 197 SAETKIEEANLQIASIDAQLAAVTS 221


>gi|163868808|ref|YP_001610032.1| multidrug resistance efflux pump VceA protein [Bartonella
           tribocorum CIP 105476]
 gi|161018479|emb|CAK02037.1| multidrug resistance efflux pump VceA protein [Bartonella
           tribocorum CIP 105476]
          Length = 364

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 92/319 (28%), Gaps = 28/319 (8%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           I      L+    K  +       +++ L       +          +++  ++L     
Sbjct: 59  IAAIAPKLNGYIEKIAIKANQIVKKDDILFYLDNGDYQIALDQTEARLNTQKKTLLRIDA 118

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++ + + +  D + + +   A+ ++ Q  L  +  L E     Q+D++  +    ++   
Sbjct: 119 QITAAHSSLDDAKAQKAAASAIATNAQLTLKRVTELKENRYAPQSDVDDAKSAYEQAIAN 178

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +     +      +I  L                    + +             ++    
Sbjct: 179 VNRADAQIAAARANIQVL---------------EAQRSETESQTKSLELSREKAQRDLNS 223

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I +P  G I    + +        Q L  +VP     YI A     Q+Q++  G  A 
Sbjct: 224 TIIRAPFDGIIGNLTAKTGDFVVN-GQRLAALVPIH-ALYIEANYKETQLQNIHAGQKAY 281

Query: 350 VRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDN 401
           +    +       F   +  I P           Q      T+    + ++I+       
Sbjct: 282 ISVDAFEKE---VFTGTVLSISPATGAVFSLLPPQNATGNFTKIVQRIPVRISIPEEILK 338

Query: 402 NIELRNGFPAEVLFTAKNT 420
              +R G    V    +  
Sbjct: 339 TGHIRAGMSVSVEVDTRTK 357



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 55/170 (32%), Gaps = 19/170 (11%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
            + ++  I    +G I+K  ++    + +   L   ++        +T   ++ +K ++ 
Sbjct: 55  VQGDIAAIAPKLNGYIEKIAIKANQIVKKDDILFYLDNGDYQIALDQTEARLNTQKKTLL 114

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGISSVYRS 163
            +   I    S+LD    +         + +  L      K +    +       S Y  
Sbjct: 115 RIDAQITAAHSSLDDAKAQKAAASAIATNAQLTLKRVTELKENRYAPQSDVDDAKSAYEQ 174

Query: 164 LKMKLTR-----------MRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
               + R           ++ +   R + E+++  L       Q+DL   
Sbjct: 175 AIANVNRADAQIAAARANIQVLEAQRSETESQTKSLELSREKAQRDLNST 224


>gi|289665323|ref|ZP_06486904.1| membrane fusion protein RaxA [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 449

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 95/300 (31%), Gaps = 10/300 (3%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +    L +      +      +      +     +  +      ++ +  LLR      
Sbjct: 149 RRAAAVLAEQQRLAVEAMAQLRAQGRLQQQAAARALAGLRDRLQQVDAELDLLRHRQQLT 208

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q      +    +  VSQ  +++++  V    L+ R +  E +     + +   +A  E 
Sbjct: 209 QSIEQRYRTALTRGLVSQQFVDEKQADV----LDQRTHTLEVERERMALADALAQAQAEL 264

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                 + + L        ++  +  I +    +  + +P AG +   +         Q 
Sbjct: 265 QQLPSSLRQQLAIAGAGLQEDR-RAAIEQAAASRWEVRAPRAGRM-ALRPLQRGQAVAQG 322

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPI 373
           Q L  ++P S  T +           +  G    +RF         +F   + +I   P 
Sbjct: 323 QRLADLLPTSIATEVVLYAPSGAAGLIGPGMPVQLRFDALPYQHYGQFAGRVVEIAAAPE 382

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            ++ D+   ++  Y V +++   A         LR G   +     +    +Q    P++
Sbjct: 383 PARVDSASASEPLYRVRVRLAGDAALRAGRMAVLRPGMRVQGTLALEWRRFSQWAFEPLS 442


>gi|284052876|ref|ZP_06383086.1| RND family efflux transporter MFP subunit [Arthrospira platensis
           str. Paraca]
          Length = 508

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/328 (10%), Positives = 111/328 (33%), Gaps = 28/328 (8%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               VE++S   G I +  V +G  + QG  +      +    +   + ++   +  +  
Sbjct: 104 ARESVEVRSEIEGRITQVYVRSGEMVNQGQAIARLRSDDLEAQLRQAQANLVRTQARVAE 163

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            ++                 SR E++ +  G+   + +++ +    S+   +     ++ 
Sbjct: 164 LQAG----------------SRPEEIAEARGRLAESVARLNDAQSGSLLAEINQAQAQID 207

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +        E + +  + L  +          L  +   +Q +L   ER + +     + 
Sbjct: 208 ANIAAAELAEKRVTRFQELTEAGAISRDEFDALVSQKQTAQANLRAAERRLEQLQQNRQS 267

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            I  ++  +    +                 ++++Q +   A+  +++  LE   ++ T+
Sbjct: 268 EIALREAGVEQSQQALRRLESGTR------PQEIDQAEAQVAEAAARVRQLEVQLQETTV 321

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +    +    ++  +   L  +   +    +R  +  ++   +++G    ++ 
Sbjct: 322 QAPFTGIVGDVTAR-PGDFVNRGATLTSLT-ENDRLELRLSIPLERQGDLREGLAVEMQ- 378

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNN 380
                  +      I  I P ++    +
Sbjct: 379 ---DPQGQPIGTGRISFISPTVNPNSQS 403


>gi|294623116|ref|ZP_06702002.1| EntD [Enterococcus faecium U0317]
 gi|291597485|gb|EFF28650.1| EntD [Enterococcus faecium U0317]
          Length = 477

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/441 (10%), Positives = 145/441 (32%), Gaps = 37/441 (8%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           + H +  + +    I+ +  +  +      E+ + ++ ++  E  + +++ P    I + 
Sbjct: 37  KQHHSFYRWVLYPVILFLCIIGLFLTFAKKEVVIRTTAQLNPE-KIEKLQVPLEAKIMEN 95

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL---------- 120
            ++    + +   L+  +     +     +   + +   I   +  ++ +          
Sbjct: 96  FLKENQFVHKDDVLVRLDCSLIENEKAQIEQENQRITQQIKMAQLFIESISKGKNLFSTD 155

Query: 121 -NNKYDVLEKAFESREEQLLDFLGKYH---STCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            +  Y    K+  S +E L   L +         +V+      + + ++   ++++    
Sbjct: 156 DSFGYSNQLKSMLSEKESLRYALKQSELNDQKQLEVYEKTKRQLEKQIESSDSKLQEWQQ 215

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL-NQQERIVYKSTLELRENIH 235
            ++   N  SL               + L   +   +N +       + +   +L++ + 
Sbjct: 216 VQVAWSNNQSLKDFSKEMMANYENWQEQLNNVSDDQKNQVKLTISASINEQIEQLKKEVE 275

Query: 236 EQKNMLRHI---NELYDEANLEFANYLKEISRDLEQNQRTFADEMSK-------LTILEK 285
           + ++    +       ++   +     +E+ + +   ++T  +   K       +  L+ 
Sbjct: 276 QYQSEKAKLVKPTTSENDRISQTEKGKQELEQAITTVKQTVTELNEKQEKNQSVIKSLDD 335

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQHVK 343
              +  + +P++GT+  N+         +   L +I P          A +   +  ++K
Sbjct: 336 QLSKGILKAPVSGTVHLNEETKGQAELAKGTVLAEIYPIHEKSKMKFTALLPANESTYIK 395

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           +G     +       ++      I+     IS+     +   +Y V   +     +  + 
Sbjct: 396 EGMKVHFKLD-----QKGGAPITIDGTLDEISENSTATEKGVFYAVKGTL----KTTQSF 446

Query: 404 ELRNGFPAEVLFTAKNTTLAQ 424
             R G   E+       T  Q
Sbjct: 447 PFRYGLTGELSLIVGEKTYWQ 467


>gi|53714583|ref|YP_100575.1| putative multidrug resistance protein [Bacteroides fragilis YCH46]
 gi|52217448|dbj|BAD50041.1| putative multidrug resistance protein [Bacteroides fragilis YCH46]
          Length = 355

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 109/359 (30%), Gaps = 87/359 (24%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNK 123
           G IK+ +      +  G  LL  +D              +  R  + D E + +D L +K
Sbjct: 67  GYIKEVRFTEHQYVHAGDTLLILDD--------------REYRIRLKDAEAALMDALGSK 112

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                      +V N GI              R+  +N    E 
Sbjct: 113 ---------------------------EVLNSGI--------------RTSGVNVAVQEA 131

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +   A LS  + +L     L +K AVSQ D    +     +       + +++     
Sbjct: 132 NIAETLAHLSQQEAELNRYTRLLKKQAVSQQDYELAKANFEATRARYNALLRQKEAAQSQ 191

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            +E    +    AN L++                + L +         + +P  G     
Sbjct: 192 YSETSKRSTGAEANILRK---------------EADLEMARLNLSYTVVTAPYDGY-TGR 235

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     + Q  Q L  +V  +   ++ A     QI H+  G    ++   ++      F
Sbjct: 236 RTLEPGQFVQGGQTLSYLVRGNDK-WVTANYKETQIAHIYIGQKVRIKVDAFSGRT---F 291

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +  I           P  +   N ++ Q+   V + + D +  +    LR G   E
Sbjct: 292 HGTVTAISEATGSKYSLVPTDNSAGNFVKVQQRIPVRIDLNDASPEEMEC-LRAGMMVE 349


>gi|298485502|ref|ZP_07003585.1| HlyD family secretion protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298159966|gb|EFI01004.1| HlyD family secretion protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 166

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 1/98 (1%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K +HPA  +      +      + W+ L  I++  ++SG+I+       I+S  + ++K 
Sbjct: 49  KPSHPAP-RVFMWAIMFFAALALLWACLGKIDVVATASGKIIPSGKTKTIQSSETAVVKA 107

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
             V +G  +  G  LL  +       +   +  +   R
Sbjct: 108 IHVRDGQSVKAGQLLLELDSTSADADVGRVRSDLLAAR 145


>gi|146337675|ref|YP_001202723.1| efflux pump protein [Bradyrhizobium sp. ORS278]
 gi|146190481|emb|CAL74480.1| putative efflux pump protein (HlyD domain), EmrA-FarA family
           [Bradyrhizobium sp. ORS278]
          Length = 385

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 95/299 (31%), Gaps = 28/299 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +E Q ++   +     +  +   +     +L    T   ++  N         L    + 
Sbjct: 93  KEGQQVEKGDELFEIDAVPYRLAVDQAKAALAQARTAYDNLTANIKIYGQMLDLANQGID 152

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             QKD+   + L + N  SQ DL+     +  +  + +    +  N    +    D    
Sbjct: 153 LKQKDVERKQTLAKNNFGSQLDLDNAANALVTAGAQAQFIKQQLSNAKTQLLGNPDLPLE 212

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           EF  Y++                 +KL   ++  +  T+ +P+ G            +  
Sbjct: 213 EFPPYVQ---------------AKAKLEDAQRDLDHTTLRAPMPGIATQVDQIQLGRFVA 257

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              P+  ++  S   ++ A        +V  G    +    + + R   FK  +  + P 
Sbjct: 258 AGTPVFSVIDISNP-WVDANPKESDFTYVAVGQPVELDVDAFPNHR---FKGTVSSLSPG 313

Query: 374 ISQQ----DNNLQTQEYYEVILKIT-DLAFSDNN---IELRNGFPAEVLFTAK-NTTLA 423
              Q         T  + +V+ ++   +AF   +     L+ G    V        TLA
Sbjct: 314 TGAQFAILPPQNATGNFVKVVQRVPVRIAFDKTDKFVARLKAGMSVNVSIDTGHERTLA 372



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 63/188 (33%), Gaps = 15/188 (7%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIK 104
                V I    SG I K  V+ G Q+ +G  L   + +       +    +   + +  
Sbjct: 72  VGAQKVLITPDISGKIIKVLVKEGQQVEKGDELFEIDAVPYRLAVDQAKAALAQARTAYD 131

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS- 163
           NL  +I      LD  N   D+ +K  E ++    +  G      +       +      
Sbjct: 132 NLTANIKIYGQMLDLANQGIDLKQKDVERKQTLAKNNFGSQLDLDNAANALVTAGAQAQF 191

Query: 164 LKMKLTRMRSIYLNRLDLENKS----SLLRALLSSHQKDLTMMKNLFE--KNAVSQNDLN 217
           +K +L+  ++  L   DL  +        +A L   Q+DL     L        +Q D  
Sbjct: 192 IKQQLSNAKTQLLGNPDLPLEEFPPYVQAKAKLEDAQRDLDHT-TLRAPMPGIATQVDQI 250

Query: 218 QQERIVYK 225
           Q  R V  
Sbjct: 251 QLGRFVAA 258


>gi|328954506|ref|YP_004371840.1| secretion protein HlyD family protein [Desulfobacca acetoxidans DSM
           11109]
 gi|328454830|gb|AEB10659.1| secretion protein HlyD family protein [Desulfobacca acetoxidans DSM
           11109]
          Length = 339

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/355 (12%), Positives = 105/355 (29%), Gaps = 78/355 (21%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GII K   + G  +  G  +   +  +  D +   +  +   +  +    +         
Sbjct: 54  GIIAKINFQEGDYLQIGQVVAELDAKDLRDEVAAAEARVGAAQAVLKRFLTG-------- 105

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   SR +++ +         + + N  + +                         
Sbjct: 106 --------SRVQEIAEARAAVLQAQADLENKRLDN------------------------- 132

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                          + M+ L ++ AV  +      R   ++   + E +      LR  
Sbjct: 133 ---------------SRMEGLLKRGAVPVSR-----RDSARAAYLMAEEV------LRRA 166

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E Y                D++Q +       + L + +      T+ +P+ G ++  +
Sbjct: 167 EENYSLVKEGPRK------EDIDQAKAELKQAQANLELTQTRLNYATLTAPVNGVVLA-R 219

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                  A     ++         Y+ A +    +  V+ G  A V    Y D +     
Sbjct: 220 PAEPGEVAAIGSIILT-TGDLDNVYLEAYIPELDLARVRLGQKAVVTTDSYPDKKY---A 275

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +  I+         ++T +    ++  T +   + + EL+ G PAE +   ++
Sbjct: 276 GWVSFINAKAEFTPKTVETFKERVALVYRTKIRVENPHYELKPGMPAEAVILLED 330


>gi|107100686|ref|ZP_01364604.1| hypothetical protein PaerPA_01001712 [Pseudomonas aeruginosa PACS2]
          Length = 383

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/367 (11%), Positives = 109/367 (29%), Gaps = 65/367 (17%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SG + +  V + + +  G  LL  +  +    +   +      +  ++ +++ L+
Sbjct: 67  VSAQVSGYVAEVLVADDADVQAGDLLLRLDPRDFRQRLRAAEAREAAAQAALEAQRAKLE 126

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L+                                           +  L + ++I   R
Sbjct: 127 TLD-------------------------------------------RQLLEQAQTISRAR 143

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            D E   +  R      + D    + L +++A S+  L   + +  ++    R    E+ 
Sbjct: 144 ADGEAARAEWRR----AETDWRRYRQLADEHATSRQRLENADAVHQRARAAARRASAEEG 199

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                       A     +  +E    L Q Q    +  +   +     +   I +P AG
Sbjct: 200 RQRA--------ARDVLKSRRREAEAALAQRQAELQEAAAARELARHALDDTEIRAPFAG 251

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   +      Y     PL+ +VP  +   + A     Q++ ++ G    +    +   
Sbjct: 252 RVGQRKVR-LRQYVTPGLPLLAVVPLEQAYVV-ANYKETQLERIRPGQPVELEVDTFGRR 309

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEY------YEVILKITDLAFSDNNIELRNGFPAE 412
              +  ++      + +    +  T  +      + V +++   A       L  G    
Sbjct: 310 WRGRVDSVAPASGAVFALLPPDNATGNFTKIVQRFPVRIRLDADAAERG--RLLPGMSVI 367

Query: 413 VLFTAKN 419
                + 
Sbjct: 368 ATVDTRE 374


>gi|254253614|ref|ZP_04946931.1| Multidrug resistance efflux pump [Burkholderia dolosa AUO158]
 gi|124898259|gb|EAY70102.1| Multidrug resistance efflux pump [Burkholderia dolosa AUO158]
          Length = 372

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/363 (10%), Positives = 93/363 (25%), Gaps = 82/363 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V +   +  G PL+  +       +   +V++      +D  +          
Sbjct: 76  GYVTDVYVRDNQAVKAGDPLVRLD-------VRQYRVALDQALATVDARR---------- 118

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                  +      +     N    E +
Sbjct: 119 -------------------------------------ADIARAEADIAQQRANLEQAEAQ 141

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + + +        +      L    A +   +            EL+    +    L   
Sbjct: 142 AKVSQINARHASDEYARYAPLAATGAETHERV-----------AELKSTRDQALATLAAN 190

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N     A  + A++    +  L+Q +       +         +   + S + G +  ++
Sbjct: 191 NASIAAARTQIASF----TAQLQQTRAQLEAAEASAAQARLDLDNTIVRSTLDGRV-GDR 245

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     Y Q    L+ +VP   +  + A     QI  ++ G    +      D    +  
Sbjct: 246 TVRVGQYVQPGTRLLTVVPVDSIYLV-ANFKETQIGRMRIGQPVELHVDALPDA---ELT 301

Query: 365 AIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             ++   P        +  +      T+    V ++I   A +     L  G    V   
Sbjct: 302 GTVDSFAPGTGAQFALLPPENATGNFTKIVQRVPVRIRLAADARAQRMLLPGLSVTVDVD 361

Query: 417 AKN 419
            ++
Sbjct: 362 TRS 364


>gi|308186344|ref|YP_003930475.1| Multidrug resistance protein K [Pantoea vagans C9-1]
 gi|308056854|gb|ADO09026.1| Multidrug resistance protein K [Pantoea vagans C9-1]
          Length = 364

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 97/316 (30%), Gaps = 32/316 (10%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +  + F++ + +    + E  + Q +       +   +++   +      L MK   + +
Sbjct: 59  RGQVTFISPQVNGYLTSVEVIDLQPVKKGQLLMTIDDRIYRQRVHQAQAQLAMKQAALNN 118

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               R   E      +A L + +          +       DL + E +    +L +RE 
Sbjct: 119 NLQQRRSAEATIQSNKAALENAKAQA------LKSGF----DLKRVENLTADGSLSVRER 168

Query: 234 --IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                     +                L+ +  + +  +       + L + E       
Sbjct: 169 DAARAANAQAQAQVRQAAAQIAVAEQNLQTVIVNRDALEGDVDSARAALELAEIDLANTR 228

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P  G +      +   Y      L  +VP+ K     A +   Q+ +++ G   T+R
Sbjct: 229 ITAPDDGQLGQLSVRT-GAYVTAGTRLTSVVPNHKWII--ANLKETQLANIRPGLPVTIR 285

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDN 401
                    K+F   +E I P    +      +  T  + +      V ++I D      
Sbjct: 286 VDALD---GKRFNGQVEFISPAAGSEFSAISPDNATGNFVKIAQRIPVRIRINDQDMHQ- 341

Query: 402 NIELRNGFPAEVLFTA 417
              LR G   EV    
Sbjct: 342 ---LRPGMSVEVNIDT 354



 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/348 (12%), Positives = 114/348 (32%), Gaps = 26/348 (7%)

Query: 16  SLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           S+   + + +IG++ ++  W +  P   ++ S+        V  I    +G +   +V +
Sbjct: 22  SIAAGSGIVVIGVLVILYAWQLW-PFTSAIQSTENAYVRGQVTFISPQVNGYLTSVEVID 80

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L+T +D        + +  +   +  +  +++AL+    +    E   +S 
Sbjct: 81  LQPVKKGQLLMTIDD-------RIYRQRVHQAQAQLAMKQAALNNNLQQRRSAEATIQSN 133

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +  L +   +   +   +      +   SL ++          +   + + +  +  ++ 
Sbjct: 134 KAALENAKAQALKSGFDLKRVENLTADGSLSVRERDAARAANAQAQAQVRQAAAQIAVAE 193

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
                 ++     +  V       +   +  +   +      Q   L      Y  A   
Sbjct: 194 QNLQTVIVNRDALEGDVDSARAALELAEIDLANTRITAPDDGQLGQLSVRTGAYVTAGTR 253

Query: 255 FANYL---KEISRDLEQNQRTFADEMSKLTILEKTRE------QKTILSPIAGTIVYNQS 305
             + +   K I  +L++ Q         +TI     +      Q   +SP AG       
Sbjct: 254 LTSVVPNHKWIIANLKETQLANIRPGLPVTIRVDALDGKRFNGQVEFISPAAG------- 306

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
            S  +           V  ++   +R ++  + +  ++ G +  V   
Sbjct: 307 -SEFSAISPDNATGNFVKIAQRIPVRIRINDQDMHQLRPGMSVEVNID 353


>gi|213584694|ref|ZP_03366520.1| putative type I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 165

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 60/192 (31%), Gaps = 32/192 (16%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +G+++       ++S   GI+ +  V  G ++     +   +       +       +
Sbjct: 2   TGNGKVIPSSREQVLQSLDGGILAQLTVREGDRVQANQIVAQLDPTRLASNVGESAAKYR 61

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                      +   L  +   L  AF +      D +                      
Sbjct: 62  ASLA-------SSARLTAEVSDLPLAFPAELNGWPDLIA--------------------- 93

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                  R     R  L +  + LR  L+S  K+LT+ + L +  A S  ++ + +R   
Sbjct: 94  ----AETRLYKSRRAQLADTEAELRDALASVNKELTITQRLEKSGAASHVEVLRLQRQKS 149

Query: 225 KSTLELRENIHE 236
              L++ +   +
Sbjct: 150 DLGLKITDLRSQ 161


>gi|218681418|ref|ZP_03529315.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CIAT 894]
          Length = 406

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 87/289 (30%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L       +     +    I++   SL+    ++     + +  + +   L A +   + 
Sbjct: 133 LATLDNGDYQNALDLAQAQIATEQLSLQRIDAQIEGANASLVQAQAQKVALEAAVRGAEI 192

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                  L  K+  +  DL+     + ++   L            +I  L          
Sbjct: 193 TQKRQSELQAKSVGTAADLDNANIALDQAKANLAGGDANITAAQANITIL---------- 242

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                    ++ + +            +      + +P  G IV N+S    +     Q 
Sbjct: 243 -----QAQRKEAEGSVRSLEISRDKAARDLSFTVLKAPYDG-IVGNRSVQEGDLVSPGQR 296

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           LM +VP  +  YI A     QIQH+  G    V    Y+D         +E I P     
Sbjct: 297 LMALVPVHE-LYIDANFKETQIQHLVPGSKVNVHVDAYSDH---PVVGTVESISPASGSV 352

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++I     + ++  LR G    V    +
Sbjct: 353 FSLLPPENATGNFTKVIQRVPVRIALPQDALDSGRLRAGLSVVVDVDTR 401



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E ++  I    +G + K  V    ++  G  L T ++ +  + +DL +  I   +  +  
Sbjct: 102 EGDIATISPKVTGYVAKVNVVANQEVKAGDVLATLDNGDYQNALDLAQAQIATEQLSLQR 161

Query: 113 -----EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                E +    +  +   +      R  ++           S      + +   +L   
Sbjct: 162 IDAQIEGANASLVQAQAQKVALEAAVRGAEITQKRQSELQAKSVGTAADLDNANIALDQA 221

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +     N    +   ++L+A     +  +  ++
Sbjct: 222 KANLAGGDANITAAQANITILQAQRKEAEGSVRSLE 257


>gi|307153731|ref|YP_003889115.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 7822]
 gi|306983959|gb|ADN15840.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           7822]
          Length = 474

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/382 (12%), Positives = 115/382 (30%), Gaps = 56/382 (14%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + L  +   +  +G       V  ++S   G +++  V+ G ++  G  L   +D     
Sbjct: 61  AGLGKLRQDIEYTGNTTPVREV-SLRSQVEGQLQQLNVDVGDEVKLGQILARLDDDLLLS 119

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            ++  K      R  +                                    S  S+V +
Sbjct: 120 AVNQAKAQKAAQRSQVV-----------------------------------SAQSEVND 144

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             I      L+++      I      L+      R        D   ++ L  + A+ + 
Sbjct: 145 ARIKVEQARLELQQASA-DITRLEASLKASIEQARLEAQQTAADAARLRLLANQGAIPEQ 203

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ---NQR 271
              Q E    ++   L          +               +   +++ + +Q    Q 
Sbjct: 204 QAEQAETKAQQAQQSLLNQQASASQQISQAKTRAQTNAQILRSAQAQVAIEQQQVSAAQA 263

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               + + +   +  +    + SP+ G ++  +S    N  Q    ++K+        I 
Sbjct: 264 EVDAQKALINQAKTRQSYAVLTSPVTGKVLQ-KSSELGNLVQPGTEILKLG-DFSRVKIM 321

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            +V+  Q+  +K G    ++   +       F  I+ +I P                  L
Sbjct: 322 VEVSELQLSKIKIGQKVPIKLDAFPQEN---FSGIVTRISPAADPT-----------ARL 367

Query: 392 KITDLAFSDNNIELRNGFPAEV 413
              ++  ++ ++++ +G  A V
Sbjct: 368 VPIEITLNNPDVKIGSGLLARV 389


>gi|116049189|ref|YP_792009.1| putative multidrug resistance efflux pump [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|296390385|ref|ZP_06879860.1| putative multidrug resistance efflux pump [Pseudomonas aeruginosa
           PAb1]
 gi|115584410|gb|ABJ10425.1| putative multidrug resistance efflux pump [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 383

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/367 (11%), Positives = 110/367 (29%), Gaps = 65/367 (17%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SG + +  V + + +  G  LL  +  +    +   +      +  ++ +++ L+
Sbjct: 67  VSAQVSGYVAEVLVADDADVQAGDLLLRLDPRDFRQRLRAAEAREAAAQAALEAQRAKLE 126

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L+                                           +  L ++++I   R
Sbjct: 127 TLD-------------------------------------------RQLLEQVQTISRAR 143

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            D E   +  R      + D    + L +++A S+  L   +    ++    R    E+ 
Sbjct: 144 ADGEAARAEWRR----AETDWRRYRQLADEHATSRQRLENADAAHQRARAAARRASAEEG 199

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                       A     +  +E    L Q Q    +  +   +     +   I +P AG
Sbjct: 200 RQRA--------ARDVLKSRRREAEAALAQRQAELQEAAAARELARHALDDTEIRAPFAG 251

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   +      Y     PL+ +VP  +   + A     Q++H++ G    +    +   
Sbjct: 252 RVGQRKVR-LRQYVTPGLPLLAVVPLEQAYVV-ANYKETQLEHIRPGQPVELEVDTFGRR 309

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEY------YEVILKITDLAFSDNNIELRNGFPAE 412
              +  ++      + +    +  T  +      + V +++   A       L  G    
Sbjct: 310 WRGRVDSVAPASGAVFALLPPDNATGNFTKIVQRFPVRIRLDTDAAERG--RLLPGMSVI 367

Query: 413 VLFTAKN 419
                + 
Sbjct: 368 ATVDTRE 374


>gi|46562226|ref|YP_009061.1| hypothetical protein DVUA0021 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46447763|gb|AAS94429.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311235403|gb|ADP88256.1| secretion protein HlyD family protein [Desulfovibrio vulgaris RCH1]
          Length = 353

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/385 (11%), Positives = 113/385 (29%), Gaps = 102/385 (26%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V +SG +      + +    SG+I    V  G ++ +G PL    +      ++  + + 
Sbjct: 49  VVASGIVEPVTKELVLGFETSGVIDTVFVAEGDKVEKGQPLARLRNGMEKAQLEEAQANA 108

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  R                               ++F    + +  +     ++   R+
Sbjct: 109 QAAR-------------------------------MEFEKLTNGSRPEEKGEALAQERRA 137

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                                      +   ++ + T  + L++++A+S+ DL + +R +
Sbjct: 138 F-------------------------KVYEQYRDEATRRQRLWQQDAISREDLERAQRDM 172

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +  E      + K +                        D+ +     A   S + + 
Sbjct: 173 DVARQEYVAATQQLKLVEDMYR-----------------REDVAKAGYQLAAADSAVGVA 215

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSN----------YAQQSQPLMKIVPHSKLTYIRAK 333
               E+  + +P++GT+   +                                   +RA+
Sbjct: 216 RAALERMELRAPVSGTV--LRVHGEPGEVFSLFAPSPVISVGDI--------SALNVRAE 265

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIRE-KKFKAIIEKIDPIISQQDNNLQT--QEYYEVI 390
           V  + I  ++ G  A VR   Y   +   K   ++  + P   +  N  +   +   EV+
Sbjct: 266 VDERDIGRIRVGQVAFVRADAYGSEKFNGKVGRVVLSLTPKRLRTGNPSEPVDRSVLEVL 325

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF 415
           + +           L +G   +   
Sbjct: 326 IALDAPG------PLVSGLRVDAFI 344


>gi|323481852|gb|ADX81288.1| bacteriocin secretion accessory family protein [Enterococcus
           faecalis 62]
          Length = 428

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 57/432 (13%), Positives = 138/432 (31%), Gaps = 43/432 (9%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           ++  + + G     +    EI + +  ++     V +++ P    IK   ++    + +G
Sbjct: 1   MILFLCLGGFFL--VFAKKEIVIRTPAQLTA-QKVEKLQVPIEAKIKANNLKENQTVKKG 57

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE-SREEQLLD 140
             L+TF+     +     +     +       +  +D L ++ ++ E         Q+  
Sbjct: 58  ESLVTFDTTSLQNEKTQIEQENTTIEQQKSAAQIFIDSLMSEQNLFETEDAFGYSNQVKS 117

Query: 141 FLGKYHSTCSKVFNYGISSVYRSL------KMKLTRMRSIYLNRLDLENKSSLL--RALL 192
           FL +  +T   +    +++           +    ++      + +LE   +       L
Sbjct: 118 FLAEKEATLYALKQSEVATQKEQETYDKAKEQLEKQLTMRQKEQRELEQVRTAWIDEQSL 177

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHIN------ 245
                ++T    L++       +  +Q++ V  + L  + E I ++K  +  +       
Sbjct: 178 EGFSPEITSKYQLWKVQLTDAPE--EQKKQVKATILATIDELITQKKKEIEQLQVEQAKL 235

Query: 246 ----ELYDEANLEFANYLKEISRDLEQNQRTFADEMS-------KLTILEKTREQKTILS 294
                  +E N +     +     L   +   A+           L  + +   Q T+ +
Sbjct: 236 VVPSTTENEINSQKEKGKQSKELALATAKEKVAELTETQKKNDIALKTINEQLTQSTLKA 295

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPH--SKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           PI GTI  N    +     +   L ++ P   +      A +   +   VK G     + 
Sbjct: 296 PITGTIHLNAEVENQLEVPKGTTLAEVYPEHKNSELRFTALLPTSESMRVKPGMDIHFKL 355

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                +  K     +++I     +         +Y +   +       +N   R G   E
Sbjct: 356 DK-KGVATKTINGTLKEIS----ENSTTTDQGTFYTIKGILNPS----DNFTSRYGLTGE 406

Query: 413 VLFTAKNTTLAQ 424
           +       T  Q
Sbjct: 407 LSLIVGKKTYWQ 418


>gi|229515776|ref|ZP_04405235.1| hypothetical protein VCB_003434 [Vibrio cholerae TMA 21]
 gi|229347545|gb|EEO12505.1| hypothetical protein VCB_003434 [Vibrio cholerae TMA 21]
          Length = 395

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/378 (13%), Positives = 103/378 (27%), Gaps = 63/378 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E+     GII +  V +   + QG  L+  +D +                  +   ++  
Sbjct: 62  EVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTD----------------ARLALLQAEA 105

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D                                 +    + S   + +     + +   N
Sbjct: 106 DL-------------------------------ALAKRRVRSYLANDEGLSAMVEAQEAN 134

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              ++ +    +A     + DL+  ++L    +VS  +L   +    ++   L       
Sbjct: 135 EQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAM 194

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                             A            +        ++    +   E+  I +PI+
Sbjct: 195 AQAQATKLSTIGSQKANAALTDNTTV----DSNPEVLLAKARYEQAKIDLERTVIRAPIS 250

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q        Q   PLM +VP     Y+ A     +++ VK G   T+    Y D
Sbjct: 251 GIVAKRQV-QVGRRVQVGMPLMTVVPTDH-IYVDANFKEVELRDVKVGQPVTLTADLYGD 308

Query: 358 IRE--KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN---G--F 409
                              S       T  + +V+ ++   +     +++      G   
Sbjct: 309 EVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSM 368

Query: 410 PAEVLF--TAKNTTLAQE 425
            A +    T    TL Q 
Sbjct: 369 VATIDTAGTTDPQTLVQY 386


>gi|311748325|ref|ZP_07722110.1| hypothetical protein ALPR1_18618 [Algoriphagus sp. PR1]
 gi|126576830|gb|EAZ81078.1| hypothetical protein ALPR1_18618 [Algoriphagus sp. PR1]
          Length = 391

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/414 (13%), Positives = 142/414 (34%), Gaps = 66/414 (15%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               + L  +  ++  I    L+ ++++V + G   +      + S   G ++K+ +   
Sbjct: 25  RSSIIYLFLLGFLVAFIISLPLIYVDVAVQTRGTFQSALQRNSLISSVRGRLEKWNLFEN 84

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++ +G  L      E    I   +  I  L           +F+++   +L       E
Sbjct: 85  QKVQKGDVLAIVRGEEINLEIGGLEERIFLLE----------NFIHDLNKLLNLDMAKSE 134

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L+                              R ++   + L+ ++  +   AL+   
Sbjct: 135 IELISL----------------------------RSKNYQASLLEFQSSVNNQIALIQKL 166

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++D    + L+E  +++                       E  N+     +   E +L  
Sbjct: 167 ERDFDRAELLYESKSIA---------------------FAEFDNIDVQFKQAKAELDLVK 205

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L E  ++L ++        ++L +  +  +Q  I++  +GT++  Q+ +  ++    
Sbjct: 206 KQKLNEWEQNLIEHSNEKIRLRNQLEVYSEKLDQYKIIAGTSGTLLNVQNLNKGDFVYPQ 265

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q L +I P + +  I   ++P  I  ++K    +++   Y   +    +  + ++   ++
Sbjct: 266 QRLAEISPDTTIMAI-TYISPADIAFIRKEQKVSIQVDAYNYNQWGVVEGRVVEVADDLT 324

Query: 376 QQDNNLQTQEYYEVILKITDLAF---SDNNIELRNGFPAEVLFTAKNTTLAQEI 426
             +        Y V  K+   +    +     ++ G      F     +L Q +
Sbjct: 325 LLNEKEAG---YLVTSKLESPSLHLSTGQTGAIKKGMTFNARFVIARRSLFQLL 375


>gi|329118232|ref|ZP_08246942.1| HlyD family secretion protein [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465653|gb|EGF11928.1| HlyD family secretion protein [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 384

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 83/261 (31%), Gaps = 22/261 (8%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +      L  + + L   +      L + K        ++  L++  R   +      + 
Sbjct: 130 VAQAEAGLAGQQAALNKTVQDKASALAVSKANQAAIDNARAQLDRARREWQRIQAVSADA 189

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRD--------LEQNQRTFADEMSKLTILEK 285
           + +             EA L+ A     +++          E  Q   A+  + L + ++
Sbjct: 190 VSQSSRDAAQTAVKQAEAGLKQAQEQYAVAQQNIINTGVGREGAQAGIANAQALLDLAKQ 249

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 I +P +G  +   S            LM +VP  +     A +    + +VK G
Sbjct: 250 DLGHTVIYAPASGK-LGEVSVKQGQLVSAGTQLMSVVPPERWII--ANIKETDMANVKIG 306

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYY----EVILKITDLA 397
            +A+V          K F   + +I P  + +      +  T  +      + +KI   A
Sbjct: 307 QSASVSIDALG---GKAFSGKVAEISPATASEFSLIKADSGTGNFVKIAQRIAVKIVFDA 363

Query: 398 FSDNNIELRNGFPAEVLFTAK 418
              +   L  G  AEV    K
Sbjct: 364 GQQDLERLAPGMSAEVNIATK 384



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 53/166 (31%), Gaps = 18/166 (10%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI- 110
              +V  +     G ++K  V +   +  G PL+  +       +   +  +   +  + 
Sbjct: 86  VRGSVTTVSPRVGGYVQKVLVRDFDNVKAGQPLVEIDPAPYRAKVAQAEAGLAGQQAALN 145

Query: 111 -------------DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY----HSTCSKVF 153
                           ++A+D    + D   + ++  +    D + +       T  K  
Sbjct: 146 KTVQDKASALAVSKANQAAIDNARAQLDRARREWQRIQAVSADAVSQSSRDAAQTAVKQA 205

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             G+        +    + +  + R   +   +  +ALL   ++DL
Sbjct: 206 EAGLKQAQEQYAVAQQNIINTGVGREGAQAGIANAQALLDLAKQDL 251


>gi|311108509|ref|YP_003981362.1| hemolysin D [Achromobacter xylosoxidans A8]
 gi|310763198|gb|ADP18647.1| HlyD family secretion family protein 4 [Achromobacter xylosoxidans
           A8]
          Length = 351

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 85/246 (34%), Gaps = 18/246 (7%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE + +++   ++  + DL  ++  + ++   ++     E    +   E   +  +    
Sbjct: 108 LERQQAVIDQAIAVTRADLADIR--YAESEAQRHRRLASEGAGTQQAYEQARSRLDMAQA 165

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            +  +    +A  +  + L+      +           +    E       ++SPI G I
Sbjct: 166 RQAEHTATLQAARKQRDVLEANHEAAQAGLLRAQALKDR---AELNLSHTQVVSPIDG-I 221

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V  +S     Y     P++ +VP  +   + A    KQ+  ++ G  A +    Y D   
Sbjct: 222 VGRRSLRVGAYVSPGTPILAVVPLQQAYVV-ANFREKQLTRMRPGQPAIITVDAYPDT-- 278

Query: 361 KKFKAIIEKIDPII----SQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAE 412
                 ++ I P      S    +  T  + +V     +KI   A +D    LR G   E
Sbjct: 279 -PLHGRVQSIAPATGLSFSPVVPSNATGNFTKVAQRLPVKIVLDAPADGAPPLRAGMSVE 337

Query: 413 VLFTAK 418
            +    
Sbjct: 338 AVVDTG 343



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 63/206 (30%), Gaps = 8/206 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           + L R   L  + ++    WS       +  S+ +     +   +    SG I    VE+
Sbjct: 8   SPLPRAGALGALVLLAYAGWSWSA--TGAAESTDDATVVADHTIVAPQVSGFIDAVLVED 65

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + QG  L   +D +    +      +      +     A   L  +  V+++A    
Sbjct: 66  NQPVKQGQLLARIDDRDHRAALAAASAELAVASARLS---DAAATLERQQAVIDQAIAVT 122

Query: 135 EEQLLDFL-GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
              L D    +  +   +      +   ++ +   +R+      + +        R    
Sbjct: 123 RADLADIRYAESEAQRHRRLASEGAGTQQAYEQARSRLDMAQARQAEHTATLQAARKQRD 182

Query: 194 SHQKDLTMMKN--LFEKNAVSQNDLN 217
             + +    +   L  +    + +LN
Sbjct: 183 VLEANHEAAQAGLLRAQALKDRAELN 208


>gi|171779143|ref|ZP_02920114.1| hypothetical protein STRINF_00989 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282199|gb|EDT47626.1| hypothetical protein STRINF_00989 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 464

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 59/462 (12%), Positives = 153/462 (33%), Gaps = 44/462 (9%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSI---IGIIGLITWSILLPIEISVSSSGEILNEDNVV 57
           M+  ++++ +  H       T+L I   + +  L+ +S++   EI+V++ G I     + 
Sbjct: 1   MNPKLFQSAEFYHRRYHNFATVLVIPMTLLVFFLLAFSLIGKKEITVTTLGSIRPTKVIA 60

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            ++S  +  +    +     + +G  L+ + D      ++  +  I+      +      
Sbjct: 61  VVQSSSNNTVLTNNLSENKAVKKGDLLIQYSDKLEDSQLNAIQTQIERYERQQEALNQLK 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + L    ++     E      ++       T +   +    SV +          +I   
Sbjct: 121 ESLKQGQNLFTGDDEFDYSATVEHFLNQSQTITAQVSQSNQSVAKQEAGVNQANAAIANQ 180

Query: 178 RLDLENKSSLLRALLSSHQKD-----------------LTMMKNLFEKNAVSQNDLNQQE 220
             +L+ ++S  + +  + Q D                 L+ ++ +  +++ + N+   +E
Sbjct: 181 IANLQTQASQYQEVKDAIQTDKTNVSGNNPYATTLNSYLSQIQTIDTQSSSTDNNSASKE 240

Query: 221 RIVYKSTLELRENIHEQKNMLRHIN--------------ELYDEANLEFANYLKEISRDL 266
            +  +   +L+  I      +  +                  ++        L +    L
Sbjct: 241 SVKNQFLTDLQGQIDSINTSISSLQTQAASNYSTGSYDTSATNQIESLRQQELTQAETQL 300

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH-- 324
            Q  +   +  ++L     ++    + +  +G +  +  F       Q   + +I P   
Sbjct: 301 TQITQEKENLQAQLDQTNLSKADTVLKASQSGILHVSDEFEGQTLLPQGSQIAEIYPEIA 360

Query: 325 -SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            ++   IR  V    +  +KKG T  +     ++        I  KI  I S      + 
Sbjct: 361 KTQQVAIRYYVDSTHVSQLKKGQTVRLTLEKISNHAI----VITGKISKIASSATQTKEG 416

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
             +    L   D     ++ +L+ G   + + T    T    
Sbjct: 417 NVFEVTALATVD---KQDSSKLKYGLQGKTISTIGKKTFFNY 455


>gi|325104047|ref|YP_004273701.1| secretion protein HlyD family protein [Pedobacter saltans DSM
           12145]
 gi|324972895|gb|ADY51879.1| secretion protein HlyD family protein [Pedobacter saltans DSM
           12145]
          Length = 364

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 58/424 (13%), Positives = 128/424 (30%), Gaps = 74/424 (17%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIG--LITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           M  N + + P + K   +L+II ++G     +  +       +   +I  E N+  I + 
Sbjct: 1   MENNTQTHKPKNPKFAVILAIILVVGGGFGIYKYIHGQAHETTDDAQI--ERNLNPIIAR 58

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G I +  V++   + +G  L T +  +    ++  K ++       +  K+ ++  + 
Sbjct: 59  VGGYIDRIYVQDNQMVKKGDTLFTIQQADYEIKVEEAKAALLAAESSYEVAKADVNAASA 118

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              + E   +S    +     +     +    Y            L +  SI        
Sbjct: 119 NVAISEATIQSNTGTVEAAEIRLQQATNDFNRY----------ANLYQNHSITKQ----- 163

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                        Q +  M   L  +    Q ++ +Q+R    S                
Sbjct: 164 -------------QYEQAMTAKLEAEK---QVEVLKQQRRASSS---------------- 191

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
             N +  + ++         S+     Q       + L   E       +L+ + G +  
Sbjct: 192 QKNAVVSKTDV--------ASKQTRVAQANIDRAKATLKAAELNLSYTAVLASVDGQVSN 243

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +           Q +  I+ +++   + A     Q+  ++ G    ++   Y D     
Sbjct: 244 IRL-QPGQLVNPGQSVFYIINNTQTWVV-ANFKETQLNKIRAGQLVEIKVDAYPDD---V 298

Query: 363 FKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIE-----LRNGFPAE 412
            +  +E   P    +      +N        V      + F+ NN       LR G   +
Sbjct: 299 IEGKVESFSPATGSKFALLPPDNATGNFVKTVQRLPVKITFTANNKPEIIAMLRPGMNVD 358

Query: 413 VLFT 416
           V   
Sbjct: 359 VDVH 362


>gi|284929445|ref|YP_003421967.1| RND family efflux transporter, MFP subunit [cyanobacterium UCYN-A]
 gi|284809889|gb|ADB95586.1| RND family efflux transporter, MFP subunit [cyanobacterium UCYN-A]
          Length = 456

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/342 (13%), Positives = 114/342 (33%), Gaps = 45/342 (13%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +G I  + N++ +KS   G IK+   + G  I +   ++ F+       +   +  + + 
Sbjct: 31  TGTIEAK-NILILKSEIYGKIKQILAKEGDNITKNQIIMEFDPDNLQAKLLESQAKLAST 89

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  +                LE    +R E L +   +      ++ N  I      +  
Sbjct: 90  KARL----------------LELETGNRIEDLKEAKARLRGAKVRLNNTKIGDSIEEIAQ 133

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
               + S               +A L   Q+ +   K L E+  +S ++  +   I+ ++
Sbjct: 134 ARANLNSS--------------QASLELAQQRVARYKMLKEQGVISIDEYQEHITILRRA 179

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR--------DLEQNQRTFADEMS 278
             +L +       + +      DE        L+ + R         + Q +    +  +
Sbjct: 180 RADLEQTKRRLSQLKKRRLADLDELTTVVETELQNLQRLQAGPRREVIAQAKADVIEASA 239

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +L   +    +  + +P +G +V N     + Y ++   L+ ++ ++    +R  +  K 
Sbjct: 240 QLQTSQIHISKTKVKAPFSG-VVENIFTRDNEYVKEGDSLISLI-NNNTLRLRLTIPLKY 297

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
              +  G    +      D  +      I  I   I +   +
Sbjct: 298 SSRLSIGLPVEI----IDDSEKIITTGKISFISSNIIKNSQS 335


>gi|238022756|ref|ZP_04603182.1| hypothetical protein GCWU000324_02667 [Kingella oralis ATCC 51147]
 gi|237865959|gb|EEP67095.1| hypothetical protein GCWU000324_02667 [Kingella oralis ATCC 51147]
          Length = 372

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 83/261 (31%), Gaps = 22/261 (8%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +      L  + + L          L + K        ++  L++  R   +      + 
Sbjct: 118 VAQAEAGLAGQQAALNKTAQDKASALAVSKANQAAIDNARAQLDRARREWQRIQAVSTDA 177

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRD--------LEQNQRTFADEMSKLTILEK 285
           + +             EA L+ A     +++          E  Q   A+  + L + ++
Sbjct: 178 VSQSSRDAAQTAVKQAEAGLKQAQEQYAVAQQNIINTGVGREGAQAGIANAQALLDLAKQ 237

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                TI +P +G  +   S            LM +VP  +     A +    + +VK G
Sbjct: 238 DLGHTTIYAPASGK-LGEVSVKQGQLVSAGTQLMSVVPPERWVI--ANIKETDMANVKIG 294

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYY----EVILKITDLA 397
            +A+V          K F   + +I P  + +      +  T  +      + +KI   A
Sbjct: 295 QSASVSIDALG---GKAFSGKVAEISPATASEFSLIKADSGTGNFVKIAQRIAVKIVFDA 351

Query: 398 FSDNNIELRNGFPAEVLFTAK 418
              +   L  G  AEV    K
Sbjct: 352 GQQDLERLAPGMSAEVNIATK 372



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/214 (10%), Positives = 73/214 (34%), Gaps = 19/214 (8%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI- 110
              +V  +     G ++K  V +   +  G PL+  +       +   +  +   +  + 
Sbjct: 74  VRGSVTTVSPRVGGYVQKVLVRDFDNVKAGQPLVEIDPAPYRAKVAQAEAGLAGQQAALN 133

Query: 111 -------------DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY----HSTCSKVF 153
                           ++A+D    + D   + ++  +    D + +       T  K  
Sbjct: 134 KTAQDKASALAVSKANQAAIDNARAQLDRARREWQRIQAVSTDAVSQSSRDAAQTAVKQA 193

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
             G+        +    + +  + R   +   +  +ALL   ++DL     ++   +   
Sbjct: 194 EAGLKQAQEQYAVAQQNIINTGVGREGAQAGIANAQALLDLAKQDLGHT-TIYAPASGKL 252

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +++ ++  +  +  +L   +  ++ ++ +I E 
Sbjct: 253 GEVSVKQGQLVSAGTQLMSVVPPERWVIANIKET 286


>gi|218892786|ref|YP_002441655.1| putative multidrug resistance efflux pump [Pseudomonas aeruginosa
           LESB58]
 gi|218773014|emb|CAW28826.1| probable multidrug resistance efflux pump [Pseudomonas aeruginosa
           LESB58]
          Length = 383

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/367 (11%), Positives = 108/367 (29%), Gaps = 65/367 (17%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SG + +  V + + +  G  LL  +  +    +   +      +  ++ +++ L+
Sbjct: 67  VSAQVSGYVAEVLVADDADVQAGDLLLRLDPRDFRQRLRAAEAREAAAQAALEAQRAKLE 126

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L+                                           +  L + ++I   R
Sbjct: 127 TLD-------------------------------------------RQLLEQAQTISRAR 143

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            D E   +  R      + D    + L +++A S+  L   +    ++    R    E+ 
Sbjct: 144 ADGEAARAEWRR----AETDWRRYRQLADEHATSRQRLENADAAHQRARAAARRANAEEG 199

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                       A     +  +E    L Q Q    +  +   +     +   I +P AG
Sbjct: 200 RQRA--------ARDVLKSRRREAEAALAQRQAELQEAAAARELARHALDDTEIRAPFAG 251

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   +      Y     PL+ +VP  +   + A     Q++ ++ G    +    +   
Sbjct: 252 RVGQRKVR-LRQYVTPGLPLLAVVPLEQAYVV-ANYKETQLERIRPGQPVELEVDTFGRR 309

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEY------YEVILKITDLAFSDNNIELRNGFPAE 412
              +  ++      + +    +  T  +      + V +++   A       L  G    
Sbjct: 310 WRGRVDSVAPASGAVFALLPPDNATGNFTKIVQRFPVRIRLDADAAERG--RLLPGMSVI 367

Query: 413 VLFTAKN 419
                + 
Sbjct: 368 ATVDTRE 374


>gi|262280004|ref|ZP_06057789.1| multidrug resistance secretion protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262260355|gb|EEY79088.1| multidrug resistance secretion protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 383

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 114/371 (30%), Gaps = 65/371 (17%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           +I S  SG + +  V++   + +G  L+  +D +    +   +  +   +       +  
Sbjct: 68  QITSMVSGQVAQVVVKDTQTVHRGDVLVRVDDRDAKIALAQAEAELAKAKRQYKQTVANS 127

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             LN++  V      S + Q+      Y     ++                         
Sbjct: 128 SSLNSQVVVRADEITSAKAQVAQAQADYDRAALELNRRA--------------------- 166

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIH 235
                                      L    AVS+ +L + +  V   K+ LEL +   
Sbjct: 167 --------------------------QLAASGAVSKEELTKSQSAVETAKAGLELAKAGL 200

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            Q +  R   E    AN      + E S              + +   +   E+  I +P
Sbjct: 201 AQASSSRKAAESTFAANEALIQGVSETST------PDVQVAQAHVEQAQLDLERTVIRAP 254

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +   ++            +M IVP +   Y+ A     Q++ V+ G   T+    Y
Sbjct: 255 VDGVVTR-RNIQVGQRVAPGTSMMMIVPLND-LYVDANFKESQLKKVRPGQIVTLTSDLY 312

Query: 356 AD-----IREKKFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRN 407
            D      +   F         +I  Q+      +  +   V + +     +++ + +  
Sbjct: 313 GDDVEYHGKVMGFSGGTGSAFALIPAQNATGNWIKVVQRLPVRIALDPKELAEHPLRVGL 372

Query: 408 GFPAEVLFTAK 418
              A+V  +AK
Sbjct: 373 SMEAKVDLSAK 383


>gi|255526238|ref|ZP_05393156.1| secretion protein HlyD family protein [Clostridium carboxidivorans
           P7]
 gi|296185588|ref|ZP_06853997.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
 gi|255510078|gb|EET86400.1| secretion protein HlyD family protein [Clostridium carboxidivorans
           P7]
 gi|296049716|gb|EFG89141.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
          Length = 349

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 60/374 (16%), Positives = 109/374 (29%), Gaps = 73/374 (19%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
              G I  E   V I S  +G I   +V  G  I  G  L+T ++          K  I+
Sbjct: 42  VVQGNI--ETKEVNINSKVAGKITAIKVAEGDSIKNGQVLITIDNSTLVAKDAQSKAQIE 99

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                +   +SA           +      E                             
Sbjct: 100 AATGQMKAAQSAKAAAQAALSKAQNGARPEE----------------------------- 130

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                                   +A           +K LF+KN  +Q DL++ +  + 
Sbjct: 131 --------------------IDEAKAQYDLALSTYNRVKGLFDKNYAAQADLDKAKASLD 170

Query: 225 KSTLELR-ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            ++ +        +K  +  +    ++A+     Y       ++Q +   ++  S     
Sbjct: 171 VASSQYNLAKDGARKEDIAALQAQVNQADATIQGYQ----AQIKQAEGGQSEVQS----- 221

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
                  TI +P  G +                PL+ I  ++   +I   V    +   K
Sbjct: 222 --YIADTTITAPADGIVNQLNV-EVGELVSTGMPLLVIT-NTTKPWIECNVKETDLSKAK 277

Query: 344 KGYTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEY--YEVILKITDLAFSD 400
              T +V+ P Y   +   K   I EK D  + +  N+    +   Y V +++ D     
Sbjct: 278 LNGTVSVKLPSYPKEKFTGKIVRINEKPDFAVKRATNDNGDFDVLSYGVKVELQDTTK-- 335

Query: 401 NNIELRNGFPAEVL 414
              +L  G  A V 
Sbjct: 336 ---QLHQGMTALVD 346


>gi|255524332|ref|ZP_05391290.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|296185288|ref|ZP_06853698.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|255512015|gb|EET88297.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|296050122|gb|EFG89546.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
          Length = 428

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 111/359 (30%), Gaps = 91/359 (25%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V  G ++  G  L T +  E              LR  +  +++ +D  N K
Sbjct: 88  SGKVASVNVNVGDKVTAGQTLFTLDTSE--------------LRATLQQQQAMVDSANAK 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                                      + T   +        E 
Sbjct: 134 L------------------------------------------QQTGGSNYQKQLTSYEQ 151

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +  +   ++ Q+D    + L+   AVS+ND +Q+      ++ +L+ +          
Sbjct: 152 DLTSKQIKCNAAQRDYDNYQRLYSTGAVSKNDFDQKADTFKTASADLQTSQQNLNLFENQ 211

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I                    D            + ++  +      T+ +PI+G +V  
Sbjct: 212 IGAQ-----------------DTRVAAAAVTQAQAGVSTAQIQINNATVTAPISG-VVSV 253

Query: 304 QSFSSSNYAQQSQP-LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           ++          Q   + I+  S        V  K I  ++ G +  V      D   K+
Sbjct: 254 KNVEVGQ-ISGGQSGSVTII-DSSSLNAEINVPDKIIGKIQVGQSVPVIITALDD---KE 308

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            K  I+ I P  + +DN+      Y V +KI + +      EL+ G   +V   A+N +
Sbjct: 309 IKGTIDNISPNTNSKDNS------YTVKVKIDNAS-----GELKAGMFTKVSLQAENKS 356


>gi|222529563|ref|YP_002573445.1| hypothetical protein Athe_1576 [Caldicellulosiruptor bescii DSM
           6725]
 gi|222456410|gb|ACM60672.1| conserved hypothetical protein [Caldicellulosiruptor bescii DSM
           6725]
          Length = 538

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 125/368 (33%), Gaps = 33/368 (8%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           PI+  +   G +  E+    I S  SG+++K  V  G  + +G  L   +       +  
Sbjct: 52  PIKEKIVLRGIVRAEE--KAIYSLVSGMVRKVYVREGDYVKKGKLLAYIDASNKVSELKK 109

Query: 99  KKVSIKNLRCHIDTEKSAL---------DFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           K+  ++ L   I   +  L         D    +  V E    S    L   +       
Sbjct: 110 KEKELEKLSNEIKKFQDKLEKYKFSSTFDGQVQEIYVTEGESVSLGANLFKIVNNKSLFL 169

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +  F   + +  R  +     +    +      +  S L  +  + Q    +   +  + 
Sbjct: 170 TVAFPSWLFNSIRVGQRLKVVLTEYDIETEGFVDAKSSLFYVNDNGQSVFDVKICVDNEG 229

Query: 210 ------------AVSQNDLNQQERIVYKSTLELRENI--HEQKNMLRHI----NELYDEA 251
                         S+N   +  R V +  L++ E +   E +  ++ I     +   + 
Sbjct: 230 RSLPSGAKAFCVITSKNPYQEI-RSVNEGILKMDEIVIKSEVEGRIKKIFVKQYDRIKKG 288

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           ++    + ++I   ++  +    +    +  L+K      ++SPI G I      S    
Sbjct: 289 DILIEFFDQDIKEQIDGLKDQIDETKEAIETLKKEINNCKVMSPINGVISNLNI-SEGKL 347

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF-PHYADIREKKFKAIIEKI 370
                 +  +   +      +K++   +  VKKG    + F PH + I E +   I+E I
Sbjct: 348 INMGDSICSVWSTND-LIFESKISEYDVYKVKKGDRVKINFAPHSSYIPESEIDGIVESI 406

Query: 371 DPIISQQD 378
           +P    ++
Sbjct: 407 NPRPLDEE 414


>gi|199598920|ref|ZP_03212330.1| lactococcin A ABC transporter permease protein [Lactobacillus
           rhamnosus HN001]
 gi|199590228|gb|EDY98324.1| lactococcin A ABC transporter permease protein [Lactobacillus
           rhamnosus HN001]
          Length = 458

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/380 (12%), Positives = 115/380 (30%), Gaps = 33/380 (8%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G ++ +G  LL + D+     I L K  +  L+            +    D+  KA  
Sbjct: 76  KEGKRVKKGETLLVYHDVANPTQIKLLKQQLATLKEQQQQLDVLKQSVTENKDLFSKADR 135

Query: 133 -SREEQLLDFLGKYHSTCSKVFNYGISS-------------VYRSLKMKLTRMRSIYLNR 178
              ++Q+ D+L +             +              +  S++    +M +I   +
Sbjct: 136 FGYQQQVQDYLSQRRVLTLTAEAEQATQTVASEKNKEIDRLLSASIQTSQAKMAAISEAK 195

Query: 179 LDLENKSSL----------LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             ++    L           +        D     NL  +          +E+    S  
Sbjct: 196 AAIQANKPLPSRHAYHYLYQQYESEIKNTDAEAQANLKRQYLAQLQTQLDEEQTNLTSLE 255

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           + R    +     +   E         +   +    +  + Q+    + +KL  L    +
Sbjct: 256 QQRAGQKQADVSAQKAGETQANLTALQSRLQQTAVAEQTKVQQQVQADEAKLATLNDETQ 315

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH-SKLTYIRAK--VTPKQIQHVKKG 345
              + +  +G +    + + + Y      L +I+P  ++ T    K  V+P +I  +K+G
Sbjct: 316 NYHVKASASGVLHLETALAGNQYVPSGSVLARILPDLTEQTVADIKLGVSPTEIMSIKRG 375

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
               +R     ++       +  ++  I      + +   ++ V  ++           L
Sbjct: 376 QKVRLRIA--ENVPTPTI--LDGRVYAIDVAPTRDPKVGNFFTVKARV--KLSKSQRQSL 429

Query: 406 RNGFPAEVLFTAKNTTLAQE 425
             G   +        T    
Sbjct: 430 YYGLAGQASVITGTKTYWDY 449


>gi|325663031|ref|ZP_08151481.1| hypothetical protein HMPREF0490_02221 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325470485|gb|EGC73715.1| hypothetical protein HMPREF0490_02221 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 561

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/375 (12%), Positives = 117/375 (31%), Gaps = 51/375 (13%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE-----TTDLIDLKK 100
            SG +   +      SP +  + + + + G  +  G  L+ F+  +         +DL+ 
Sbjct: 86  VSGTVD-SEKKKVFYSPVNAPVSQLRAKVGQAVKAGDLLVAFDTSDLEKNNQKAQMDLQS 144

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
               N       ++SA +      D    A  +R +             +K  +  ++S+
Sbjct: 145 AVNTNQSAREQADRSASEAAKAAADAQAAAGAARAQAEQQIASVESQISAK--SQQMASL 202

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            +S++ ++T  +++     +   + +     +S    ++   +       VS     Q E
Sbjct: 203 EQSVQDEITTNQTLQPQLDEWNAQKAANLERISVLYGEVNSHREEINAGNVSDEKKAQLE 262

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             + + + E+ E       +   I ++  +          +I ++++  Q       + +
Sbjct: 263 AEITEKSKEISEKEGANAALDAQIAQVSAQIQTGSQQAYAQIQQEVQALQAQAEQLRASI 322

Query: 281 TILEKT-----------------------------------REQKTILSPIAGTIVYNQS 305
           ++   +                                   + +  I +   G I   ++
Sbjct: 323 SVETPSASIPDTSLTQGQINNMAITENLAELAVLSSEELMAKARDGIKADFDGVISDVKT 382

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A     L  +V  ++   ++ ++       V+ G  A V+   Y          
Sbjct: 383 M-EGGTAVAGGELFTLV-SNQDVNVKLEIPASDFDKVEVGSKAVVKIGKYKY------DG 434

Query: 366 IIEKIDPIISQQDNN 380
           ++E ID I       
Sbjct: 435 VVESIDKIAVPNTKG 449


>gi|295291733|gb|ADF87541.1| InfAE-Acc [Streptococcus infantarius subsp. infantarius]
          Length = 464

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 57/462 (12%), Positives = 151/462 (32%), Gaps = 44/462 (9%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSI---IGIIGLITWSILLPIEISVSSSGEILNEDNVV 57
           M+  ++++ +  H       T+L I   + +  L+ +S++   EI+V++ G I     + 
Sbjct: 1   MNPKLFQSAEFYHRRYHNFATVLVIPMTLLVFFLLAFSLIGKKEITVTTLGSIRPTKVIA 60

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            ++S  +  +    +     + +G  L+ + D      ++  +  I+      +      
Sbjct: 61  VVQSSSNNTVLTNNLSENKAVKKGDLLIQYSDKLEDSQLNAIQTQIERYERQQEALNQLK 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + L    ++     E      ++       T +   +    SV +          +I   
Sbjct: 121 ESLKQGQNLFTGDDEFDYSATVEHFLNQSQTITAQVSQSNQSVAKQEAGVNQANAAIANQ 180

Query: 178 RLDLENKSSLLRALLSSHQKD-----------------LTMMKNLFEKNAVSQNDLNQQE 220
             +L+ ++S  + +  + Q D                 L+ ++ +  +++ + N+   +E
Sbjct: 181 IANLQTQASQYQEVKDAIQTDKTNVSGNNPYATTLNSYLSQIQTIDTQSSSTDNNSASKE 240

Query: 221 RIVYKSTLELRENIHEQKNMLRHIN--------------ELYDEANLEFANYLKEISRDL 266
            +  +   +L+  I      +  +                  ++        L +    L
Sbjct: 241 SVKNQFLTDLQGQIDSINTSISSLQTQAASNYSTGSYDTSATNQIESLRQQELTQTETQL 300

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH-- 324
            Q  +   +  ++L     ++    + +  +G +  +  F       Q   + +I P   
Sbjct: 301 TQITQEKENLQAQLDQTNLSKADTVLKASQSGILHVSDEFEGQTLLPQGSQIAEIYPEIA 360

Query: 325 -SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            ++   IR  V    +  +KKG T  +     ++         I KI    +Q       
Sbjct: 361 KTQQVAIRYYVDSTHVSQLKKGQTVRLTLEKISN-HAIVITGKISKIASSATQTKEGNVF 419

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           +      +   D +      +L+ G   + + T    T    
Sbjct: 420 EVTALATVDKQDSS------KLKYGLQGKTISTIGKKTFFNY 455


>gi|315179758|gb|ADT86672.1| multidrug resistance protein VceA [Vibrio furnissii NCTC 11218]
          Length = 399

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 84/303 (27%), Gaps = 53/303 (17%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E+     GII    V +   + +G  L+  +D +    +   +  +              
Sbjct: 66  EVTPAVGGIIASVSVVDTQYVNKGDVLVQIDDTDARLALSQAEADLA------------- 112

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                                             +    + S   + +     + +   +
Sbjct: 113 ----------------------------------LATRRVRSYLANDEGLTAMVEAQEAS 138

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
               E +    +A  +  + DL   ++L    +VS  +L   +    ++   L       
Sbjct: 139 EQRAEAQLKAAQADFARAKIDLARREDLVRSGSVSGEELTNAKTGFQQAQANLNAAKAAM 198

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                             A           +N        ++    +   E+  I +PI+
Sbjct: 199 AQAQATKLSTIGSQKANAALTDNTTV----ENNPEVLLAKARYEQAQIDLERTVIRAPIS 254

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I   Q        Q   PLM +VP +   Y+ A     ++++VK G   T+    Y D
Sbjct: 255 GIIAKRQV-QVGRRVQVGMPLMTVVPVNN-IYVDANFKEVELRNVKVGQPVTLTADLYGD 312

Query: 358 IRE 360
              
Sbjct: 313 DVT 315


>gi|255659172|ref|ZP_05404581.1| putative periplasmic component of efflux system [Mitsuokella
           multacida DSM 20544]
 gi|260848623|gb|EEX68630.1| putative periplasmic component of efflux system [Mitsuokella
           multacida DSM 20544]
          Length = 377

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/218 (22%), Positives = 77/218 (35%), Gaps = 32/218 (14%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYL----KEISRDLEQNQRTFADEMSKL 280
           ++   L    +E K           +A  E  +YL     +  + LE  Q  +   +S+L
Sbjct: 90  QTVATLDAKDYEAKRDQAQYKVTNTQAEYERISYLYSIGADTQKQLEDAQMNYDTAVSEL 149

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSS--NYAQQSQP--LMKIVPHSKLTYIRAKVTP 336
              E    + +IL+P+ GT+V     +      A    P  +M+I   S    I+AKV  
Sbjct: 150 AQAESDASETSILAPMDGTVVGEPK-TVGTMAVATSDNPTVIMRIADLSSK-QIKAKVDE 207

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE----------- 385
             I ++K G  AT     Y D   K F A + KI    +    +  +             
Sbjct: 208 TDIGNIKVGQQATFTVDTYTD---KTFTARVTKISQTDTSNSWDTSSSSSSSSSSSSSSA 264

Query: 386 ---YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              YY V L + D      + +L     A V     + 
Sbjct: 265 SVIYYYVTLDVDDP-----DSQLLPAMTARVEINTADK 297



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 12/125 (9%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +VS++G I   D+V E+ S  +  +K   V+   ++  G  + T +  +     D  + 
Sbjct: 51  STVSATGTIQPVDSV-EVSSKITARLKSVLVKENDKVTAGQTVATLDAKDYEAKRDQAQY 109

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            + N +   +           +   L       ++QL D    Y +  S++      +  
Sbjct: 110 KVTNTQAEYE-----------RISYLYSIGADTQKQLEDAQMNYDTAVSELAQAESDASE 158

Query: 162 RSLKM 166
            S+  
Sbjct: 159 TSILA 163


>gi|110634270|ref|YP_674478.1| secretion protein HlyD [Mesorhizobium sp. BNC1]
 gi|110285254|gb|ABG63313.1| secretion protein HlyD [Chelativorans sp. BNC1]
          Length = 383

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 94/281 (33%), Gaps = 26/281 (9%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + +   ++    +L+    ++  +  +    E ++    + ++  +  L   ++
Sbjct: 107 LFKVDPEPYRIALAQAEAALEGARLQVEQLRASYSQAEAQARDADSEVAYLETQLKRQQD 166

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L  K   SQ+ L+Q ER + K+   L        + L  +            N   E   
Sbjct: 167 LSGKGVASQSSLDQAERNLQKARESLSATRQAVASALAALG----------GNPKIET-- 214

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                  T    ++          Q T+ +P  G I     F +  +     PL  +V  
Sbjct: 215 ---DKHPTVLSALAARDKAAYELAQTTVRAPADGIIAQASDFRNGQFVSTGTPLFSLV-E 270

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNN 380
           ++ +++ A     Q+ H+K G  A + F  Y D      +A +E I      +       
Sbjct: 271 TRSSWVEANFKETQLTHMKPGQKAEIVFDTYPDR---PLEATVEDISAGTGAEFSLLPAQ 327

Query: 381 LQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTAK 418
             T  + +V  +I     L   +  + LR G  A V     
Sbjct: 328 NATGNWVKVTQRIPVRLKLQIEEPELLLRTGMSATVTVDTG 368


>gi|116249514|ref|YP_765352.1| putative type I HlyD transporter [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115254162|emb|CAK03770.1| putative type I HlyD transporter [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 394

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 53/379 (13%), Positives = 105/379 (27%), Gaps = 83/379 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +   I    SG + +  V +   +  G PL   +D +                    
Sbjct: 90  VKADNSTIAPKVSGYLAEVLVMDNETVKAGQPLARIDDRDF------------------- 130

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             K+ALD  +      E    +++  L        +  + V     +  +     K    
Sbjct: 131 --KAALDQASADVAAAEATVNAKQASLDIQQSTIAAARATVDVDRANETFAEQNNKRYS- 187

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                                           NL            Q    +  +   + 
Sbjct: 188 --------------------------------NLATSGYAPVQTAQQAASQIAAAQASIV 215

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +       ++ ++ L               + +L Q +   A   +     E      T
Sbjct: 216 RDSASLDAAVKQVDLL---------------NAELAQAKAALARSQAVQHQAELNLSYAT 260

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P+ GT+  N++     Y Q    LM +VP +    I A     Q+  VK G    + 
Sbjct: 261 ITAPVDGTV-GNRTLRVGQYVQAGTQLMSVVPTTAAYVI-ANYKETQLTDVKAGQPVDIE 318

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDN----NI 403
              +           ++ + P   Q+      +  T  + +V+ +I      D     N 
Sbjct: 319 VDMFPGRTY---HGHVDSLAPASGQEFALLPPDNATGNFTKVVQRIPVKIVLDGDAAANG 375

Query: 404 ELRNGFPAEVLFTAK-NTT 421
           +LR G   +     K + +
Sbjct: 376 DLRPGMSVQPSIDTKNDRS 394


>gi|300312565|ref|YP_003776657.1| multidrug resistance transmembrane efflux pump protein
           [Herbaspirillum seropedicae SmR1]
 gi|300075350|gb|ADJ64749.1| multidrug resistance transmembrane efflux pump protein
           [Herbaspirillum seropedicae SmR1]
          Length = 411

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/371 (11%), Positives = 112/371 (30%), Gaps = 65/371 (17%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            +    +GI+    V +   + +G  L+  +D +                  +  +++A 
Sbjct: 75  TVTPAINGIVAAVDVVDTQAVKKGDVLVRIDDAD----------------ARLAVDQAAA 118

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D    +  V                        K F    + +   +  +    +     
Sbjct: 119 DLDRTERKV------------------------KGFFANDAGLAAQVLAREAEQKRASAQ 154

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            L  +         L   + DL   + L +  +VS  +L+     +  +   L+     +
Sbjct: 155 LLSAQAD-------LKRAEIDLQRREALAKSGSVSGEELSNARTALLTAQANLKAAEAAE 207

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                +I         + A+ +   +  ++ N        +KL   +   E+  + +P+ 
Sbjct: 208 VQSRANIKATQG---AQKASTVLTANTTVDDN-PEVVLARAKLEQAKLDLERTVLRAPVD 263

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I   Q        Q    L+ +VP  +  ++ A     Q+  V+ G   T++   Y  
Sbjct: 264 GVIARRQV-QVGQRVQSGATLLSVVPL-QQMHVDANFKEGQLTKVRIGQPVTMKADLYGG 321

Query: 358 IREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
               ++  ++  +           P  +   N ++  +   V + +     +   + +  
Sbjct: 322 SV--EYHGVVTGLSGGTGSAFAVIPAQNATGNWIKVVQRLPVRISLDPKELAQRPLSVGL 379

Query: 408 GFPAEVLFTAK 418
               E+    +
Sbjct: 380 SMVVEIDTRGQ 390


>gi|186683545|ref|YP_001866741.1| RTX secretion protein D [Nostoc punctiforme PCC 73102]
 gi|186465997|gb|ACC81798.1| Gram-negative RTX secretion protein D [Nostoc punctiforme PCC
           73102]
          Length = 391

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/327 (10%), Positives = 114/327 (34%), Gaps = 47/327 (14%)

Query: 44  VSSSGEILNEDNVVEI---KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +++ G +     V+ +   ++  +  + +  ++ G ++ +G  + T +  ++        
Sbjct: 55  ITALGRLQPLTEVIRLSAPQTLENDRVAQLFIKEGDKLKKGQIIATLDSKQS-------- 106

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                                     L+ A +  +EQ+     +Y    +      I + 
Sbjct: 107 --------------------------LQLALKEAQEQVRVAQSRYDQIKAGAKAGDIQAQ 140

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             ++      ++     +   +   +  ++ +++ Q +    ++L+++ A++ +D +++ 
Sbjct: 141 KATITKLQAELQGEIATQ---KANIARWQSEVTNAQAEYNRSQSLYQQGAIAVSDFDRKR 197

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             +  +  +L +   +Q   +  +     EA        +    DL+  +       + +
Sbjct: 198 LALETAQAQLAQASAQQNGTVATLEAQITEAKEVLNRIAEVRPVDLQAAKTEIDRANAAV 257

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
             ++    Q  I +PIAG I   +  +        + +  +   + +  I A+V    I 
Sbjct: 258 KRVQNDLNQADIKAPIAGQI--IKIHTRPGEKLTDEGIADLGQTNDMVAI-AEVYQTDIA 314

Query: 341 HVKKGYTATVRFPHYADIREKKFKAII 367
            +  G  A +    +      + K  +
Sbjct: 315 KIHVGQKALITSQAF----TGQVKGTV 337


>gi|172062664|ref|YP_001810315.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
 gi|171995181|gb|ACB66099.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
          Length = 363

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/371 (13%), Positives = 103/371 (27%), Gaps = 75/371 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    +G + K  V +  ++  G  L+  +  +           +      +D
Sbjct: 61  VGGDVTVLAPKVNGFVDKILVSDNQRVKAGDVLVQLDARDYDA-------KLAQADAEVD 113

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           + +SA+  L  K  +                                             
Sbjct: 114 SARSAVTELEAKQQL--------------------------------------------- 128

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
              Y          +   A L+    D    + L + +AVS   + + +    K+   + 
Sbjct: 129 --QYAVIGQHAADRNASSAELTRASSDRVRYRELVKSDAVSNQIVERADADYSKADAAVA 186

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   +      ++   +     E  T
Sbjct: 187 RSDAALLASKRQLDVL---------------GAQLADARARVNTALAAQRVAALNVEYTT 231

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +  N++      A    PL+ +VP S   +I A     Q++ ++ G    V 
Sbjct: 232 IRSPVDGYV-GNRTSRVGMLANVGVPLLTVVPASG-LWIDANFKEDQLRKMRAGDRVDVT 289

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIE--LRN 407
               +     +  ++        S       T  + ++   + +         +E  LR 
Sbjct: 290 LDASSTRLRGRVDSLAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGLEHVLRP 349

Query: 408 GFPAEVLFTAK 418
           G  A V     
Sbjct: 350 GLSAAVTVHTD 360


>gi|87199732|ref|YP_496989.1| secretion protein HlyD [Novosphingobium aromaticivorans DSM 12444]
 gi|87135413|gb|ABD26155.1| secretion protein HlyD [Novosphingobium aromaticivorans DSM 12444]
          Length = 383

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 80/282 (28%), Gaps = 28/282 (9%)

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           + T        +     +    L  +                 +  L+    ++  M+ L
Sbjct: 104 YDTRLAQSTAQVEVARATETATLAAINEAQSAVGQARAALQASQRELAYLNGEVARMRPL 163

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
               A  +   +Q      K+  ++             +     +A    A      ++ 
Sbjct: 164 VASGAEPRQAFDQLVANRDKAAADVSAKQAALSAASDRVASTRAQAGQSAAQVKAAQAQR 223

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
                                     I++P++G I  N +     + Q  Q LM IVP  
Sbjct: 224 ---------------QAASTDLATTRIVAPVSGKI-GNSTVRVGQFVQPGQRLMTIVPT- 266

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQ 377
           +  Y+ A     QI  ++ G   TV      D+    F   +E I P        I  Q 
Sbjct: 267 QAIYVEANFKETQIGLMRAGQPVTVHVDALPDV---DFHGTVESITPGTGANFSLIPPQN 323

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                T+    V ++I   A  ++   L  G    V    ++
Sbjct: 324 ATGNFTKIVQRVPVRIRINAGPESRKVLVPGLSLTVEVDTRS 365


>gi|320160201|ref|YP_004173425.1| secretion protein HlyD family protein [Anaerolinea thermophila
           UNI-1]
 gi|319994054|dbj|BAJ62825.1| secretion protein HlyD family protein [Anaerolinea thermophila
           UNI-1]
          Length = 475

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 63/437 (14%), Positives = 135/437 (30%), Gaps = 90/437 (20%)

Query: 24  SIIGIIGLITWSILL--------------------------PIEISVSSSGEILNEDNVV 57
             + ++GL  W                               + +S S +G +       
Sbjct: 22  VAVLVLGLAVWGYFALWVPRMQTASAATTTTGTQTAQVRRGNLVVSASGTGTLT-AGKTA 80

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTF-EDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           E+  P SG +    V  G Q+ +G  L    +       +   +V++   +  ++T K+ 
Sbjct: 81  ELAFPVSGTVGAVYVSVGQQVEEGQVLAELADRTSLEAAMKSAEVTLLLAQQELETLKA- 139

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                           S EE L +                +S+  ++L+     ++    
Sbjct: 140 ----------------SGEENLAN------------ARLAVSTAEKALQTAQASLKQSGQ 171

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR--ENI 234
           +R   E  ++   + L + ++     ++L    A     +   ++ + ++    R     
Sbjct: 172 SRCSEETTTAYYDSYLKAKERY----EDLKSSGADYLTRVLPAKQSMDQAYANYRYCSGY 227

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRD--------LEQNQRTFADEMSKLTILEKT 286
           ++ +        +  +A+LE A                 L Q +    +        +K 
Sbjct: 228 YDYEITASQAEYVIAKADLEKAQATLATLEANNGIDPTTLAQAESKVLNAQVAYEQAKKN 287

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT--YIRAKVTPKQIQHVKK 344
            E   + +P AGT++      + +       +  I     L    +   V    +  V  
Sbjct: 288 YEGAILRAPFAGTVLSVAG-EAGDAVGTGTFITLI----DLLHPLVEFAVDETDMDKVAV 342

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI- 403
           GY A V F    D+        ++++ P +  +         Y+V+  +  L  S  N+ 
Sbjct: 343 GYPAEVVFDALPDLTFP---GTVQQVSPSLVSEGG-------YKVLKGVVALDLSQMNLN 392

Query: 404 -ELRNGFPAEVLFTAKN 419
             L  G  A V   A  
Sbjct: 393 QPLLAGLNAAVDIIAAR 409


>gi|312877851|ref|ZP_07737798.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311795355|gb|EFR11737.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 270

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 91/251 (36%), Gaps = 3/251 (1%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P     +T + +  IIGL+ WSI+  I+I+V   G I   ++   I S   G +K+  V+
Sbjct: 23  PKYGLFITYILLTLIIGLVLWSIVGEIDINVKVQGIIRPWEDEARIISYVGGKVKEIFVK 82

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +G  L   +D E     DL K  ++     +   K     +     +  K   +
Sbjct: 83  EGEYVKKGEVLFKIDDEEYVKKRDLLKQQLREYEKKVSDLKELRKSIEKDESLRNK--NN 140

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                        +   K           S+     ++ S+     +++   S L+ +  
Sbjct: 141 VYYLRYLSYSYEVNKLKKAAEEERVQREYSIMDFKKQIESLEEKIKNIDKFESTLKEIKE 200

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              K   +    ++   +    L++ E    +   +L  +  ++K ++  I+   DE   
Sbjct: 201 IVDKGEQIKLAKYDIGYMGFI-LSEIEVYNQQVKAKLDGSDIQKKILVSKIDLKLDELKQ 259

Query: 254 EFANYLKEISR 264
             +  + +  +
Sbjct: 260 SKSELVLQKQK 270


>gi|213029660|ref|ZP_03344107.1| type I secretion membrane fusion protein, HlyD family [Salmonella
          enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 93

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 31/78 (39%)

Query: 9  LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +    +   R+ L+  +  + L  W+    ++   + +G+++       ++S   GI+ 
Sbjct: 16 QRERAFSGAGRIVLICSLLFLILGIWAWFGRLDEVSTGNGKVIPSSREQVLQSLDGGILA 75

Query: 69 KFQVENGSQILQGTPLLT 86
          +  V  G ++     +  
Sbjct: 76 QLTVREGDRVQANQIVAQ 93


>gi|121591268|ref|ZP_01678564.1| multidrug resistance protein VceA [Vibrio cholerae 2740-80]
 gi|147673357|ref|YP_001216967.1| multidrug resistance protein VceA [Vibrio cholerae O395]
 gi|153817760|ref|ZP_01970427.1| multidrug resistance protein VceA [Vibrio cholerae NCTC 8457]
 gi|229505014|ref|ZP_04394524.1| hypothetical protein VCF_000220 [Vibrio cholerae BX 330286]
 gi|229511316|ref|ZP_04400795.1| hypothetical protein VCE_002723 [Vibrio cholerae B33]
 gi|229518434|ref|ZP_04407878.1| hypothetical protein VCC_002458 [Vibrio cholerae RC9]
 gi|229529519|ref|ZP_04418909.1| hypothetical protein VCG_002614 [Vibrio cholerae 12129(1)]
 gi|229608018|ref|YP_002878666.1| hypothetical protein VCD_002936 [Vibrio cholerae MJ-1236]
 gi|254848528|ref|ZP_05237878.1| multidrug resistance protein VceA [Vibrio cholerae MO10]
 gi|255745790|ref|ZP_05419738.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio cholera CIRS 101]
 gi|262158930|ref|ZP_06030042.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio cholerae INDRE 91/1]
 gi|262169293|ref|ZP_06036985.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio cholerae RC27]
 gi|121546873|gb|EAX57030.1| multidrug resistance protein VceA [Vibrio cholerae 2740-80]
 gi|126511698|gb|EAZ74292.1| multidrug resistance protein VceA [Vibrio cholerae NCTC 8457]
 gi|146315240|gb|ABQ19779.1| multidrug resistance protein VceA [Vibrio cholerae O395]
 gi|229333293|gb|EEN98779.1| hypothetical protein VCG_002614 [Vibrio cholerae 12129(1)]
 gi|229345149|gb|EEO10123.1| hypothetical protein VCC_002458 [Vibrio cholerae RC9]
 gi|229351281|gb|EEO16222.1| hypothetical protein VCE_002723 [Vibrio cholerae B33]
 gi|229357237|gb|EEO22154.1| hypothetical protein VCF_000220 [Vibrio cholerae BX 330286]
 gi|229370673|gb|ACQ61096.1| hypothetical protein VCD_002936 [Vibrio cholerae MJ-1236]
 gi|254844233|gb|EET22647.1| multidrug resistance protein VceA [Vibrio cholerae MO10]
 gi|255736865|gb|EET92262.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio cholera CIRS 101]
 gi|262022106|gb|EEY40815.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio cholerae RC27]
 gi|262029115|gb|EEY47767.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio cholerae INDRE 91/1]
 gi|327484076|gb|AEA78483.1| Membrane fusion component of tripartite multidrug resistance system
           [Vibrio cholerae LMA3894-4]
          Length = 395

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/378 (13%), Positives = 103/378 (27%), Gaps = 63/378 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E+     GII +  V +   + QG  L+  +D +                  +   ++  
Sbjct: 62  EVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTD----------------ARLALLQAEA 105

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D                                 +    + S   + +     + +   N
Sbjct: 106 DL-------------------------------ALAKRRVRSYLANDEGLSAMVEAQEAN 134

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              ++ +    +A     + DL+  ++L    +VS  +L   +    ++   L       
Sbjct: 135 EQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAM 194

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                             A            +        ++    +   E+  I +PI+
Sbjct: 195 AQAQATKLSTIGSQKANAALTDNTTV----DSNPEVLLAKARYEQAKIDLERTVIRAPIS 250

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q        Q   PLM +VP     Y+ A     +++ VK G   T+    Y D
Sbjct: 251 GIVAKRQV-QVGRRVQVGMPLMTVVPTDH-IYVDANFKEVELRDVKVGQPVTLTADLYGD 308

Query: 358 IRE--KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN---G--F 409
                              S       T  + +V+ ++   +     +++      G   
Sbjct: 309 DVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSM 368

Query: 410 PAEVLF--TAKNTTLAQE 425
            A +    T    TL Q 
Sbjct: 369 VATIDTAGTTDPQTLVQY 386


>gi|303249159|ref|ZP_07335398.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           fructosovorans JJ]
 gi|302489432|gb|EFL49380.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           fructosovorans JJ]
          Length = 421

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 55/426 (12%), Positives = 126/426 (29%), Gaps = 107/426 (25%)

Query: 15  ASLKRMTLLSIIGIIGLITW-----------------SILLPIEISVSSSGEILNE-DNV 56
              K + LL++I   GL  W                 + +  +   + ++G I  +   +
Sbjct: 2   RIFKWLFLLAVIAGAGLFAWKHYTKKAEPPRVLATAEAKIGDVRKVLEATGIIKAQVGAI 61

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           V+I +  +G IK+  V+ G ++ +G  +   +D              + LR  +   ++ 
Sbjct: 62  VKIGARATGTIKEMNVKVGDEVHKGQLIAVIDD--------------RELRAGLAEAEAK 107

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           L+  + +   +E  +  R                                          
Sbjct: 108 LERASAELGQVEAVYPKR------------------------------------------ 125

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              + + +  L  A       +    + LF K  ++++ L    R       E+      
Sbjct: 126 -IAEAQAEQRLSEAKSEYAASNHKRQQQLFNKELIARDVLEAARRDALVGHNEVLAKQAS 184

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
              +                    E  ++  + Q+   +  + +  ++       I+SPI
Sbjct: 185 LVRL------------------TTEFDKERLKAQKAKEEAQAVIDSIKTKISYTRIVSPI 226

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA--KVTPKQIQHVKKGYTATVRFPH 354
            G + +  S +          +  ++     T +     V    +  VK G     R   
Sbjct: 227 NGVVAFVTSQA-GETVVAGLQVANLITVLDPTRLEMWIYVDETDVGQVKPGMPVEFRVDA 285

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           Y       FK  + +I P    Q        YY+ ++++     +  ++ LR     +  
Sbjct: 286 YPATT---FKGSVNQIYP----QPEIRDNIVYYQALVRLD----TKESMRLRPEMTTQCQ 334

Query: 415 FTAKNT 420
              +  
Sbjct: 335 IVVQEK 340


>gi|15596434|ref|NP_249928.1| multidrug resistance efflux pump [Pseudomonas aeruginosa PAO1]
 gi|9947167|gb|AAG04626.1|AE004553_3 probable multidrug resistance efflux pump [Pseudomonas aeruginosa
           PAO1]
          Length = 383

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/367 (11%), Positives = 108/367 (29%), Gaps = 65/367 (17%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SG + +  V + + +  G  LL  +  +    +   +      +  ++ +++ L+
Sbjct: 67  VSAQVSGYVAEVLVADDADVQAGDLLLRLDPRDFRQRLRAAEAREAAAQAALEAQRAKLE 126

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L+                                           +  L + ++I   R
Sbjct: 127 TLD-------------------------------------------RQLLEQAQTISRAR 143

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            D E   +  R      + D    + L +++A S+  L   +    ++    R    E+ 
Sbjct: 144 ADGEAARAEWRR----AETDWRRYRQLADEHATSRQRLENADAAHQRARAAARRASAEEG 199

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                       A     +  +E    L Q Q    +  +   +     +   I +P AG
Sbjct: 200 RQRA--------AKDVLKSRRREAEAALAQRQAELQEAAAARELARHALDDTEIRAPFAG 251

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   +      Y     PL+ +VP  +   + A     Q++ ++ G    +    +   
Sbjct: 252 RVGQRKVR-LRQYVTPGLPLLAVVPLEQAYVV-ANYKETQLERIRPGQPVELEVDTFGRR 309

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEY------YEVILKITDLAFSDNNIELRNGFPAE 412
              +  ++      + +    +  T  +      + V +++   A       L  G    
Sbjct: 310 WRGRVDSVAPASGAVFALLPPDNATGNFTKIVQRFPVRIRLDADAAERG--RLLPGMSVI 367

Query: 413 VLFTAKN 419
                + 
Sbjct: 368 ATVDTRE 374


>gi|288906210|ref|YP_003431432.1| accessory factor for bacteriocin ABC-transporter [Streptococcus
           gallolyticus UCN34]
 gi|288732936|emb|CBI14515.1| putative accessory factor for bacteriocin ABC-transporter
           [Streptococcus gallolyticus UCN34]
          Length = 464

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 58/462 (12%), Positives = 151/462 (32%), Gaps = 44/462 (9%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSI---IGIIGLITWSILLPIEISVSSSGEILNEDNVV 57
           M+  ++++ +  H       T+L I   + +  L+ +S++   EI+V++ G I     + 
Sbjct: 1   MNPKLFQSAEFYHRRYHNFATVLVIPMTLLVFFLLAFSLIGKKEITVTTLGSIRPTKVIA 60

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            ++S  +  +    +     + +G  L+ + D      ++  +  IK      +      
Sbjct: 61  VVQSSSNNTVLTNNLSENKAVKKGDLLIQYSDKLEDSQLNAIQTQIKRYERQQEALNQLK 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + L    ++     E      ++       T +   +    SV +          +I   
Sbjct: 121 ESLKQGQNLFTGDDEFGYSATVERFLNQSQTITAQVSQSNQSVAKQEAGVNQANAAIANQ 180

Query: 178 RLDLENKSSLLRALLSSHQKD-----------------LTMMKNLFEKNAVSQNDLNQQE 220
             +L+ ++S  + +  + Q D                 L+ ++ +  +++ + N+   +E
Sbjct: 181 IANLQTQASQYQEVKDAIQTDKTNVSGNNPYATTLNSYLSQIQTIDTQSSSTDNNSASKE 240

Query: 221 RIVYKSTLELRENIHEQKNMLRHIN--------------ELYDEANLEFANYLKEISRDL 266
            +  +   +L+  I      +  +                  ++        L +    L
Sbjct: 241 SVKNQFLTDLQGQIDSINASISSLQTQAASNYSTGSYDTSATNQIESLRQQELTQAETQL 300

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH-- 324
            Q  +   +  ++L     ++    + +  +G +  +  F       Q   + +I P   
Sbjct: 301 MQITQEKENLQAQLDQTNLSKADTVLKASQSGILHVSDEFEGQTLLPQGSQIAEIYPDIA 360

Query: 325 -SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            ++   IR  V    +  +KKG T  +     ++         I KI    +Q       
Sbjct: 361 KTQQVAIRYYVDSTHVSQLKKGQTVRLTLEKISN-HAIVITGKISKIASSATQTKEENVF 419

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           +      +   D +      +L+ G   + + T    T    
Sbjct: 420 EVTALATVDKQDSS------KLKYGLQGKTISTIGKKTFFNY 455


>gi|229552813|ref|ZP_04441538.1| lactococcin A ABC superfamily ATP binding cassette transporter
           permease protein [Lactobacillus rhamnosus LMS2-1]
 gi|229313795|gb|EEN79768.1| lactococcin A ABC superfamily ATP binding cassette transporter
           permease protein [Lactobacillus rhamnosus LMS2-1]
          Length = 459

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/380 (12%), Positives = 115/380 (30%), Gaps = 33/380 (8%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G ++ +G  LL + D+     I L K  +  L+            +    D+  KA  
Sbjct: 77  KEGKRVKKGETLLVYHDVANPTQIKLLKQQLATLKEQQQQLDVLKQSVTENKDLFSKADR 136

Query: 133 -SREEQLLDFLGKYHSTCSKVFNYGISS-------------VYRSLKMKLTRMRSIYLNR 178
              ++Q+ D+L +             +              +  S++    +M +I   +
Sbjct: 137 FGYQQQVQDYLSQRRVLTLTAEAEQATQTVASEKNKEIDRLLSASIQTSQAKMAAISEAK 196

Query: 179 LDLENKSSL----------LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             ++    L           +        D     NL  +          +E+    S  
Sbjct: 197 AAIQANKPLASRHAYHYLYQQYESEIKNTDAEAQANLKRQYLAQLQTQLDEEQTNLTSLE 256

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           + R    +     +   E         +   +    +  + Q+    + +KL  L    +
Sbjct: 257 QQRAGQKQADVSAQKAGETQANLTALQSRLQQTAVAEQTKVQQQVQADEAKLATLNDETQ 316

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH-SKLTYIRAK--VTPKQIQHVKKG 345
              + +  +G +    + + + Y      L +I+P  ++ T    K  V+P +I  +K+G
Sbjct: 317 NYHVKASASGVLHLETALAGNQYVPSGSVLARILPDLTEQTVADIKLGVSPTEIMSIKRG 376

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
               +R     ++       +  ++  I      + +   ++ V  ++           L
Sbjct: 377 QKVRLRIA--ENVPTPTI--LDGRVYAIDVAPTRDPKVGNFFTVKARV--KLSKSQRQSL 430

Query: 406 RNGFPAEVLFTAKNTTLAQE 425
             G   +        T    
Sbjct: 431 YYGLAGQASVITGTKTYWDY 450


>gi|262191715|ref|ZP_06049890.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio cholerae CT 5369-93]
 gi|262032410|gb|EEY50973.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio cholerae CT 5369-93]
          Length = 395

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/378 (13%), Positives = 103/378 (27%), Gaps = 63/378 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E+     GII +  V +   + QG  L+  +D +                  +   ++  
Sbjct: 62  EVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTD----------------ARLALLQAEA 105

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D                                 +    + S   + +     + +   N
Sbjct: 106 DL-------------------------------ALAKRRVRSYLANDEGLSAMVEAQEAN 134

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              ++ +    +A     + DL+  ++L    +VS  +L   +    ++   L       
Sbjct: 135 EQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAM 194

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                             A            +        ++    +   E+  I +PI+
Sbjct: 195 AQAQATKLSTIGSQKANAALTDNTTV----DSNPEVLLAKARYEQAKIDLERTVIRAPIS 250

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q        Q   PLM +VP     Y+ A     +++ VK G   T+    Y D
Sbjct: 251 GIVAKRQV-QVGRRVQVGMPLMTVVPTDH-IYVDANFKEVELRDVKVGQPVTLTADLYGD 308

Query: 358 IRE--KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN---G--F 409
                              S       T  + +V+ ++   +     +++      G   
Sbjct: 309 DVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSM 368

Query: 410 PAEVLF--TAKNTTLAQE 425
            A +    T    TL Q 
Sbjct: 369 VATIDTAGTTDPQTLVQY 386


>gi|148257433|ref|YP_001242018.1| putative multidrug resistance protein A [Bradyrhizobium sp. BTAi1]
 gi|146409606|gb|ABQ38112.1| putative multidrug resistance protein A [Bradyrhizobium sp. BTAi1]
          Length = 456

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 95/292 (32%), Gaps = 36/292 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRALLSSHQK- 197
           D + +      K+      S   + +  + R+ R +   +  +E   + L +  ++ ++ 
Sbjct: 165 DVIFRIDDGDYKIAVDAARSKIATQEATIARIGRQVAAQQSAVEQAQANLTSSEAAMKRA 224

Query: 198 --DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             D    + L  K   S     Q E                 ++           A    
Sbjct: 225 GLDYERQQALSSKGFASHATFEQSE---------------AARDQGMAAVRAARAAFDAA 269

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            + ++       + Q   A+  + L   E+  E  T+ +P+ GT       +  ++    
Sbjct: 270 RDNVEVTKAQQVEAQAQLAELKTSLAKAERDLEFATVRAPVDGTFSNRLVNT-GDFVAVG 328

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--- 372
           Q L  +VP     +I A     Q++ ++ G   T++   Y       FK +++ I P   
Sbjct: 329 QRLGNVVPLDD-VFIDANFKETQLKRIRPGQPVTIKVDAYGAR---GFKGVVDSISPAAG 384

Query: 373 -IISQQDNNLQTQEYYE------VILKITDLAFSDNNIELRNGFPAEVLFTA 417
            + +    +  T  + +      V +++       N   LR G    V    
Sbjct: 385 SVFTLLPPDNATGNFTKIVQRLPVRIRVPKEVARQN--LLRAGMSVYVTVDT 434


>gi|265765953|ref|ZP_06093994.1| HlyD family secretion protein [Bacteroides sp. 2_1_16]
 gi|263253621|gb|EEZ25086.1| HlyD family secretion protein [Bacteroides sp. 2_1_16]
          Length = 355

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 109/359 (30%), Gaps = 87/359 (24%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNK 123
           G IK+ +      +  G  LL  +D              +  R  + D E + +D L +K
Sbjct: 67  GYIKEVRFTEHQYVHAGDTLLILDD--------------REYRIRLKDAEAALMDALGSK 112

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                      +V N GI              R+  +N    E 
Sbjct: 113 ---------------------------EVLNSGI--------------RTSGVNVAVQEA 131

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +   A LS  + +L     L +K AVSQ D    +     +       + +++     
Sbjct: 132 NIAETLARLSQQEAELNRYTRLLKKQAVSQQDYELAKANFEATRARYNALLRQKEAAQSQ 191

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            +E    +    AN L++                + L +         + +P  G     
Sbjct: 192 YSETSKRSTGAEANILRK---------------EADLEMARLNLSYTVVTAPYDGY-TGR 235

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     + Q  Q L  +V  +   ++ A     QI H+  G    ++   ++      F
Sbjct: 236 RTLEPGQFVQGGQTLSYLVRGNDK-WVTANYKETQIAHIYIGQKVRIKVDAFSGRT---F 291

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +  I           P  +   N ++ Q+   V + + D +  +    LR G   E
Sbjct: 292 HGTVTAISEATGSKYSLVPTDNSAGNFVKVQQRIPVRIDLNDASPEEMEC-LRAGMMVE 349


>gi|13471111|ref|NP_102680.1| secretion protein [Mesorhizobium loti MAFF303099]
 gi|14021855|dbj|BAB48466.1| probable secretion protein [Mesorhizobium loti MAFF303099]
          Length = 417

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 104/322 (32%), Gaps = 21/322 (6%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E +   ++      +         ++L    +  +    +          +L      MR
Sbjct: 81  ESTDDAYVKADSTTIAPKVSGYIAEVLVRDNQKVTVGQVLARIDDRDFRAALDQAQADMR 140

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +      +L+ +  L RAL+   +  +   +      AV  +      +    +T +   
Sbjct: 141 AAEATVRNLDAQIVLQRALIEQARATVAATQASLRFAAVDADRYATLAKSGTGTTQKAEA 200

Query: 233 NIH---EQKNMLRHINELYDEANLEFANYLKEISRDLEQN-QRTFADEMSKLTILEKTRE 288
           +     +    L         A +       E  + L Q  +   A E ++L        
Sbjct: 201 SRAGADQLAAGLARDQAAVVAAEVRIDVLATERDKALAQVDRAQAAGEQARLN-----LS 255

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             TI +P+ GT+   ++     Y      LM +VP + +  + A     Q+ +V+ G   
Sbjct: 256 YATITAPVDGTV-GARTLRIGQYVGAGTQLMAVVPQNAVYVV-ANFKETQLTYVRGGQPV 313

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDN 401
            V    +  +   + +  ++ + P    +      +  T  + +++ +I     +   + 
Sbjct: 314 RVAIDGFPGV---ELEGHVDSLSPASGLEFALLPPDNATGNFTKIVQRIPVKIMIEDQEL 370

Query: 402 NIELRNGFPAEVLFTAKNTTLA 423
              LR G   E     K T LA
Sbjct: 371 GGLLRAGMSVEPTIDTKATVLA 392



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 46/164 (28%), Gaps = 12/164 (7%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC--- 108
            + +   I    SG I +  V +  ++  G  L   +D +    +D  +  ++       
Sbjct: 88  VKADSTTIAPKVSGYIAEVLVRDNQKVTVGQVLARIDDRDFRAALDQAQADMRAAEATVR 147

Query: 109 ---------HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
                        E++       +  +   A ++     L   G   +  ++    G   
Sbjct: 148 NLDAQIVLQRALIEQARATVAATQASLRFAAVDADRYATLAKSGTGTTQKAEASRAGADQ 207

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +   L      + +  +    L  +     A +   Q      +
Sbjct: 208 LAAGLARDQAAVVAAEVRIDVLATERDKALAQVDRAQAAGEQAR 251


>gi|257061484|ref|YP_003139372.1| efflux transporter RND family, MFP subunit [Cyanothece sp. PCC
           8802]
 gi|256591650|gb|ACV02537.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           8802]
          Length = 516

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 53/377 (14%), Positives = 126/377 (33%), Gaps = 36/377 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V   G++        + S   G ++K  V+ G  I  G  +   +D +    +   K  +
Sbjct: 90  VRLLGQVEAGGKA-TLSSQIDGTVQKIVVKEGDVITPGMTVAILDDADANIALAQAKARL 148

Query: 104 KNLRCHIDTEKSA-LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY- 161
              + ++   +      +  + +    A ++RE + L+ L    +    +     + +  
Sbjct: 149 VQEKSNLARLQVGTRPEIIRQREAELTAAQAREREALETLESLIALQPDLIAQRQAELET 208

Query: 162 ---RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
              R  + +  R R   L+     ++ +L+ A  S+       ++        +Q  L  
Sbjct: 209 VKTREKEAQDNRQRIQRLSLEGALSERALVEAKSSADAFRSERIR--------AQAALKA 260

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           QE    K+  E R      K+    I  L  EA             +++  Q   +   +
Sbjct: 261 QETESRKAIAEARTGYDNAKSDRLRIAALLAEAQAGPTQ------EEIQAQQGVVSAANA 314

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            +   +   E+  I + ++G +V ++     +Y + + P++ +V   +   I  ++    
Sbjct: 315 AVEQAKLALERTKIKASVSG-VVQSREADPGDYVEVNNPIVTLV-SDRSLDIFLEIPETL 372

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
              V +G    +        R         +I  ++   + N + Q    V +       
Sbjct: 373 SGQVTEGMRVNL------FARALPNWQKATEITAVVPVANVNSRRQ---LVRV-----TL 418

Query: 399 SDNNIELRNGFPAEVLF 415
           ++    L  G   +   
Sbjct: 419 NNPPKNLLPGMAIQADL 435


>gi|119477489|ref|ZP_01617680.1| HlyD family secretion protein [marine gamma proteobacterium
           HTCC2143]
 gi|119449415|gb|EAW30654.1| HlyD family secretion protein [marine gamma proteobacterium
           HTCC2143]
          Length = 361

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 55/368 (14%), Positives = 123/368 (33%), Gaps = 58/368 (15%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
             ++++I S  SG + +F V +G  + +   L   +  ET   +      I  +    + 
Sbjct: 36  ASDMIDISSKVSGWLVEFPVSSGDLLQKNDVLAVIDSRETVLKLQELASHISAMAADYEG 95

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            ++    +                                            +  +  ++
Sbjct: 96  RQAERSMVE-------------------------------------------RQTMGALQ 112

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +        E   +   + L     + T  + L E+  +SQ D    + +  KS    + 
Sbjct: 113 AAESQLAMAEASLAASDSELEFRASEWTRAQALRERRIISQQDYEADKSLFKKSQQGRQA 172

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            +    +    + E   EA       ++     L+  Q +   E+++  I     + +T+
Sbjct: 173 ALGSVASARAKLIEA--EAAQSRLIVMERHLARLKFEQESQVAELARHRI---DLQDRTM 227

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP+ G +          Y Q  + L+ ++      ++ A +   +I+ ++ G +  V  
Sbjct: 228 VSPLKGIVDRIFID-PGEYVQPGRRLL-MMHDPDNVWVDANIKETEIRRLRPGQSVAVSV 285

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIELRN 407
             Y D     F  IIEKI    + Q     +   +  + +V  ++T  +A    +  L+ 
Sbjct: 286 DAYPDE---VFTGIIEKIGHAATSQFSLLPSTNPSGNFTKVTQRLTVKIALQQRDGLLKP 342

Query: 408 GFPAEVLF 415
           G   EV  
Sbjct: 343 GMMVEVSI 350


>gi|154623592|dbj|BAF74799.1| accessory protein homologue [Enterococcus faecium]
          Length = 455

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/449 (10%), Positives = 149/449 (33%), Gaps = 41/449 (9%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           + H +  + +    I+ +  +  +      E+ + ++ ++  E  + +++ P    I + 
Sbjct: 15  KQHHSFYRWVLYPVILFLCIIGLFLTFAKKEVVIRTTAQLNPE-KIEKLQVPLEAKIMEN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL---------- 120
            ++    + +   L+  +     +     +   + +   I   +  ++ +          
Sbjct: 74  FLKENQFVHKDDVLVRLDCSLIENEKAQIEQENQRITQQIKMAQLFIESISKGKNLFSTD 133

Query: 121 -NNKYDVLEKAFESREEQLLDFLGKYH---STCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            +  Y    K+  S +E L   L +         +V+      + + ++   ++++    
Sbjct: 134 DSFGYSNQLKSMLSEKESLRYALKQSELNDQKQLEVYEKTKRQLEKQIESSDSKLQEWQQ 193

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL-NQQERIVYKSTLELRENIH 235
            ++   N  SL               + L   +   +N +       + +   +L++ + 
Sbjct: 194 VQVAWSNNQSLKDFSKEMMANYENWQEQLNNVSDDQKNQVKLTISASINEQIEQLKKEVE 253

Query: 236 EQKNMLRHI---NELYDEANLEFANYLKEISRDLEQNQRTFADEMSK-------LTILEK 285
           + ++    +       ++   +     +E+ + +   ++T  +   K       +  L+ 
Sbjct: 254 QYQSEKAKLVKPTTSENDRISQTEKGKQELEQAITTVKQTVTELNEKQEKNQSVIKSLDD 313

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQHVK 343
              +  + +P++GT+  N+         +   L +I P          A +   +  ++K
Sbjct: 314 QLSKGILKAPVSGTVHLNEETKGQAELAKGTVLAEIYPIHEKSKMKFTALLPANESTYIK 373

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           +G     +       ++      I+     IS+     +   +Y V   +     +  + 
Sbjct: 374 EGMKVHFKLD-----QKGGAPITIDGTLDEISENSTATEKGVFYAVKGTL----KTTQSF 424

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
             R G   E+      TT  Q    PI D
Sbjct: 425 PFRYGLTGELSLIVGETTYCQ----PIVD 449


>gi|225628594|ref|ZP_03786628.1| HlyD family secretion protein [Brucella ceti str. Cudo]
 gi|225616440|gb|EEH13488.1| HlyD family secretion protein [Brucella ceti str. Cudo]
          Length = 413

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 89/289 (30%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 137 IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 196

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++   L     +  +   +I             
Sbjct: 197 TMARVQKLHETRFVAQSELDNAQSALDQARARLAGADAQIASAKTNI------------- 243

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
               +     +   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 244 --SVLEAQYNEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 300

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P     
Sbjct: 301 IAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAV 356

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++IT    +  + ++R G    V    +
Sbjct: 357 FSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDTR 405



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 65/257 (25%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +   +  +    +D     +       +
Sbjct: 105 VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 164

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 165 RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSALDQ 224

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+          +   S+L A  +        ++ L    A                
Sbjct: 225 ARARLAGADAQIASAKTNISVLEAQYNEAASSTKSLE-LARDKAARDLSFTSLRAPFDGV 283

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +     + I  L     L      KE      +   T    +  +   +  
Sbjct: 284 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETQLAHIKVGETAHIYVDAIDGTKFD 343

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 344 GKVASI-APASGAVFSL 359


>gi|325523712|gb|EGD01977.1| secretion protein HlyD family protein [Burkholderia sp. TJI49]
          Length = 336

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/370 (12%), Positives = 105/370 (28%), Gaps = 75/370 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    +G + +  V +  ++  G  L+  +  +    +      + + R  + 
Sbjct: 34  VGGDVTVLAPKVNGFVDRILVTDNQRVKAGDVLVQLDARDYDAKLAQAGAEVDSARAAVA 93

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                               E++++     +G++ +  S                     
Sbjct: 94  ------------------ELEAKQQLQYAVIGQHAADRSAS------------------- 116

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                             A L+    D    + L + +AVS   + + +    K+   + 
Sbjct: 117 -----------------SAELTRAASDRVRYRELVKSDAVSNQIVERADADYTKADAAVA 159

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   +      ++   +     E  T
Sbjct: 160 RSDAALLASKRQLDVL---------------GAQLADARARVNTALAAQRVAALNVEYTT 204

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +  N++      A    PL+ IVP +   +I A     Q++ ++ G    V 
Sbjct: 205 IRSPVDGYV-GNRTGRVGMLANVGVPLLTIVPATG-LWIDANFKEDQLRKMRAGDRVDVT 262

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIE--LRN 407
                     +  ++        S       T  + ++   + +         +E  LR 
Sbjct: 263 LDASGTPLHGRIDSLAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGLERVLRP 322

Query: 408 GFPAEVLFTA 417
           G  A V    
Sbjct: 323 GLSAVVTVHT 332


>gi|17989463|ref|NP_542096.1| multidrug resistance protein A [Brucella melitensis bv. 1 str. 16M]
 gi|256043039|ref|ZP_05445984.1| multidrug resistance protein A [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260564272|ref|ZP_05834757.1| multidrug resistance protein A [Brucella melitensis bv. 1 str. 16M]
 gi|265989478|ref|ZP_06102035.1| secretion protein HlyD family protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|17985343|gb|AAL54360.1| multidrug resistance protein a [Brucella melitensis bv. 1 str. 16M]
 gi|260151915|gb|EEW87008.1| multidrug resistance protein A [Brucella melitensis bv. 1 str. 16M]
 gi|263000147|gb|EEZ12837.1| secretion protein HlyD family protein [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 405

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 91/289 (31%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +  F    +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 129 IFQFDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 188

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++   L     +  +   +I+ L          
Sbjct: 189 TMARVQKLHETRFVAQSELDNAQSALDQARARLAGVDAQIASAKANISVL---------- 238

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                     +   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 239 -----EAQYNEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 292

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P     
Sbjct: 293 IAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAV 348

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++IT    +  + ++R G    V    +
Sbjct: 349 FSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDTR 397



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/257 (12%), Positives = 67/257 (26%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +  F+  +    +D     +       +
Sbjct: 97  VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQFDAGDYQIALDEANAKLATQKETLI 156

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 157 RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSALDQ 216

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+  +       +   S+L A  +        ++ L    A                
Sbjct: 217 ARARLAGVDAQIASAKANISVLEAQYNEAASSTKSLE-LARDKAARDLSFTSLRAPFDGV 275

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +     + I  L     L      KE      +   T    +  +   +  
Sbjct: 276 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETQLAHIKVGETAHIYVDAIDGTKFD 335

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 336 GKVASI-APASGAVFSL 351


>gi|325979184|ref|YP_004288900.1| bacteriocin secretion accessory protein [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|325179112|emb|CBZ49156.1| bacteriocin secretion accessory protein [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
          Length = 464

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 57/462 (12%), Positives = 151/462 (32%), Gaps = 44/462 (9%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSI---IGIIGLITWSILLPIEISVSSSGEILNEDNVV 57
           M+  ++++ +  H       T+L I   + +  L+ +S++   EI+V++ G I     + 
Sbjct: 1   MNPKLFQSAEFYHRRYHNFATVLVIPMTLLVFFLLAFSLIGKKEITVTTLGSIRPTKVIA 60

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            ++S  +  +    +     + +G  L+ + D      ++  +  I+      +      
Sbjct: 61  VVQSSSNNTVLTNNLSENKAVKKGDLLIQYSDKLEDSQLNAIQTQIERYERQQEALNQLK 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + L    ++     E      ++       T +   +    SV +          +I   
Sbjct: 121 ESLKQGQNLFTGDDEFGYSATVERFLNQSQTITAQVSQSNQSVAKQEAGVNQANAAIANQ 180

Query: 178 RLDLENKSSLLRALLSSHQKD-----------------LTMMKNLFEKNAVSQNDLNQQE 220
             +L+ ++S  + +  + Q D                 L+ ++ +  +++ + N+   +E
Sbjct: 181 IANLQTQASQYQEVKDAIQTDKTNVSGNNPYATTLNSYLSQIQTIDTQSSSTDNNSASKE 240

Query: 221 RIVYKSTLELRENIHEQKNMLRHIN--------------ELYDEANLEFANYLKEISRDL 266
            +  +   +L+  I      +  +                  ++        L +    L
Sbjct: 241 SVKNQFLTDLQGQIDSINASISSLQTQAASNYSTGSYDTSATNQIESLRQQELTQAETQL 300

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH-- 324
            Q  +   +  ++L     ++    + +  +G +  +  F       Q   + +I P   
Sbjct: 301 MQITQEKENLQAQLDQTNLSKADTVLKASQSGILHVSDEFEGQTLLPQGSQIAEIYPDIA 360

Query: 325 -SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            ++   IR  V    +  +KKG T  +     ++         I KI    +Q       
Sbjct: 361 KTQQVAIRYYVDSTHVSQLKKGQTVRLTLEKISN-HAIVITGKISKIASSATQTKEENVF 419

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           +      +   D +      +L+ G   + + T    T    
Sbjct: 420 EVTALATVDKQDSS------KLKYGLQGKTISTIGKKTFFNY 455


>gi|282898397|ref|ZP_06306388.1| ABC-transporter, DevB family protein [Raphidiopsis brookii D9]
 gi|281196928|gb|EFA71833.1| ABC-transporter, DevB family protein [Raphidiopsis brookii D9]
          Length = 431

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 106/335 (31%), Gaps = 19/335 (5%)

Query: 43  SVSSSGEILNEDNVVEIKSPF---SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +V++ G +     V+++ +P       +++  VE G  +  G  +   +   +      +
Sbjct: 58  TVTALGRLEPRGKVIKLSAPTPTQGNRVERLLVEEGDMVKVGQVVAILDS-RSRLQAAYQ 116

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +         I+ EK        +    +      E Q +        T  ++       
Sbjct: 117 EAEATVKIAQINLEKVQQGAKIGEIKAQKAEIGRIEAQRIGDESGQQLTILRLEAQWQGE 176

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                 +       I   +L+LE    L R    +  + L   K L  +    Q  L + 
Sbjct: 177 TTSQRAIINRLQVQIKNAQLELERYQQLYRDG--AISQSLFDSKTLTVETIAQQ--LKEA 232

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLEQNQRTFAD 275
              + +     R  I E K  L  I     E  +     L +I+     D+   +     
Sbjct: 233 TANLERMDKSGRRQIEEAKTALNRIRSTGGEQIISAKATLDKIAEVRPIDVAAARAELNR 292

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             +     + + +Q  I SP  G I      + +     ++ +++I   +   Y  A+V 
Sbjct: 293 AKAVAKQAKASFDQVYIKSPQKGIIFD--IHTRAGELVGNEGIVEIG-ETSQMYAVAEVY 349

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
              I  +       +     +   E + +  +++I
Sbjct: 350 QSDISKILPQQRVKI----LSSSLEGELQGTVDRI 380


>gi|60682605|ref|YP_212749.1| HlyD family secretion protein [Bacteroides fragilis NCTC 9343]
 gi|60494039|emb|CAH08831.1| putative HlyD-family secretion protein [Bacteroides fragilis NCTC
           9343]
          Length = 355

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 109/359 (30%), Gaps = 87/359 (24%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNK 123
           G IK+ +      +  G  LL  +D              +  R  + D E + +D L +K
Sbjct: 67  GYIKEVRFTEHQYVHAGDTLLILDD--------------REYRIRLKDAEAALMDALGSK 112

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                      +V N GI              R+  +N    E 
Sbjct: 113 ---------------------------EVLNSGI--------------RTSGVNVAVQEA 131

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +   A LS  + +L     L +K AVSQ D    +     +       + +++     
Sbjct: 132 NIAETLAHLSQQEAELNRYTRLLKKQAVSQQDYELAKANFEATRARYNALLRQKEAAQSQ 191

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            +E    +    AN L++                + L +         + +P  G     
Sbjct: 192 YSETSKRSTGAEANILRK---------------EADLEMARLNLSYTVVTAPYDGY-TGR 235

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     + Q  Q L  +V  +   ++ A     QI H+  G    ++   ++      F
Sbjct: 236 RTLEPGQFVQGGQTLSYLVRGNDK-WVTANYKETQIAHIYIGQKVRIKVDAFSGRT---F 291

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +  I           P  +   N ++ Q+   V + + D +  +    LR G   E
Sbjct: 292 HGTVTAISEATGSKYSLVPTDNSAGNFVKVQQRIPVRIDLNDASPEEMEC-LRAGMMVE 349


>gi|225685979|ref|YP_002733951.1| secretion protein HlyD family protein [Brucella melitensis ATCC
           23457]
 gi|225642084|gb|ACO01997.1| secretion protein HlyD family protein [Brucella melitensis ATCC
           23457]
          Length = 413

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 89/289 (30%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 137 IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 196

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++   L     +  +   +I             
Sbjct: 197 TMARVQKLHETRFVAQSELDNAQSALDQARARLAGVDAQIASAKANI------------- 243

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
               +     +   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 244 --SVLEAQYNEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 300

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P     
Sbjct: 301 IAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAV 356

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++IT    +  + ++R G    V    +
Sbjct: 357 FSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDTR 405



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 66/257 (25%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +   +  +    +D     +       +
Sbjct: 105 VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 164

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 165 RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSALDQ 224

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+  +       +   S+L A  +        ++ L    A                
Sbjct: 225 ARARLAGVDAQIASAKANISVLEAQYNEAASSTKSLE-LARDKAARDLSFTSLRAPFDGV 283

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +     + I  L     L      KE      +   T    +  +   +  
Sbjct: 284 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETQLAHIKVGETAHIYVDAIDGTKFD 343

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 344 GKVASI-APASGAVFSL 359


>gi|325859976|ref|ZP_08173103.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella denticola CRIS 18C-A]
 gi|325482502|gb|EGC85508.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella denticola CRIS 18C-A]
          Length = 344

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 96/263 (36%), Gaps = 12/263 (4%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + + L       +T +         +  + +       +    RLDL  + + +R  +++
Sbjct: 72  DARQLVLKRDQLATNNDQLQATHGQLEANKRQLAANREATASRRLDLTRQVASIRQQIAN 131

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q++      L    AV++  ++  +  +      L++ +   +  +   N    E +  
Sbjct: 132 QQRERQRFAELLRDGAVARKQVDDIDYQIQV----LQKQLAATEEQIASQNASLAEQDKG 187

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A  ++ I+          A   S+   L+       + SPI GT++  +      +   
Sbjct: 188 IAAQMEGINAQQAGVNAQQAGIRSQRAQLDDQIAHTFVKSPITGTVLE-KYAECGEFVPV 246

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            +PL K+   +   +IRA +T  Q++ V+ G    V    Y D + K +  ++  I    
Sbjct: 247 GKPLFKMA-DTGRMFIRAYLTSGQLKRVRIGQRVKVM-ADYGDGQRKTYDGVVAWISSRS 304

Query: 375 SQQ-----DNNLQTQEYYEVILK 392
                    ++ +    Y V ++
Sbjct: 305 EFTPKTILTDDERADLVYAVKVQ 327


>gi|257882223|ref|ZP_05661876.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
 gi|4760911|gb|AAD29141.1|AF099088_10 EntD [Enterococcus faecium]
 gi|257817881|gb|EEV45209.1| conserved hypothetical protein [Enterococcus faecium 1,231,502]
          Length = 455

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/441 (10%), Positives = 145/441 (32%), Gaps = 37/441 (8%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           + H +  + +    I+ +  +  +      E+ + ++ ++  E  + +++ P    I + 
Sbjct: 15  KQHHSFYRWVLYPVILFLCIIGLFLTFAKKEVVIRTTAQLNPE-KIEKLQVPLEAKIMEN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL---------- 120
            ++    + +   L+  +     +     +   + +   I   +  ++ +          
Sbjct: 74  FLKENQFVHKDDVLVRLDCSLIENEKAQIEQENQRITQQIKMAQLFIESISKGKNLFSTD 133

Query: 121 -NNKYDVLEKAFESREEQLLDFLGKYH---STCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            +  Y    K+  S +E L   L +         +V+      + + ++   ++++    
Sbjct: 134 DSFGYSNQLKSMLSEKESLRYALKQSELNDQKQLEVYEKTKRQLEKQIESSDSKLQEWQQ 193

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL-NQQERIVYKSTLELRENIH 235
            ++   N  SL               + L   +   +N +       + +   +L++ + 
Sbjct: 194 VQVAWSNNQSLKDFSKEMMANYENWQEQLNNVSDDQKNQVKLTISASINEQIEQLKKEVE 253

Query: 236 EQKNMLRHI---NELYDEANLEFANYLKEISRDLEQNQRTFADEMSK-------LTILEK 285
           + ++    +       ++   +     +E+ + +   ++T  +   K       +  L+ 
Sbjct: 254 QYQSEKAKLVKPTTSENDRISQTEKGKQELEQAITTVKQTVTELNEKQEKNQSVIKSLDD 313

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQHVK 343
              +  + +P++GT+  N+         +   L +I P          A +   +  ++K
Sbjct: 314 QLSKGILKAPVSGTVHLNEETKGQAELAKGTVLAEIYPIHEKSKMKFTALLPANESTYIK 373

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           +G     +       ++      I+     IS+     +   +Y V   +     +  + 
Sbjct: 374 EGMKVHFKLD-----QKGGAPITIDGTLDEISENSTATEKGVFYAVKGTL----KTTQSF 424

Query: 404 ELRNGFPAEVLFTAKNTTLAQ 424
             R G   E+       T  Q
Sbjct: 425 PFRYGLTGELSLIVGEKTYWQ 445


>gi|326793489|ref|YP_004311309.1| secretion protein HlyD [Marinomonas mediterranea MMB-1]
 gi|326544253|gb|ADZ89473.1| secretion protein HlyD family protein [Marinomonas mediterranea
           MMB-1]
          Length = 368

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 104/315 (33%), Gaps = 34/315 (10%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +  +     +    +E Q++       S  +K +   +      L+     +RS
Sbjct: 68  QANITPITTQISGKVQQLAVKENQVVKKGALLFSLDAKTYQVAVKKAEAQLQQVKIDLRS 127

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 +   + +L ++    +++D    +NL  ++ +S   L+   +    S L+++  
Sbjct: 128 EKAAYDEKLAEVTLAKSRFEFNKRDQMRQENLRNQHFISDAQLDSSAQATTVSQLKIQTL 187

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + + +   +     +                 +   T+    + L       E+  + 
Sbjct: 188 QKDLRRLREALGGDIKQPI---------------ELHPTYLAAKAVLEQARLNVERANVT 232

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +          Y       M +V  +K  ++ A  T K +  V+ G    ++  
Sbjct: 233 APADGVVSKLP--KVGEYLAPGSTAMVLV-GNKNLWVEANYTEKDLTFVQPGQDVEIKVD 289

Query: 354 HYADIREKKFKAIIEKIDPIISQQ----------DNNLQTQEYYEVILKITDLAFSDNNI 403
            Y  +    +K  ++ I P    +           N ++  +   V + I          
Sbjct: 290 TYPGVT---WKGTVDSISPATGSEFSVIPAENATGNWVKVAQRLPVRIHIKPQNGLP--- 343

Query: 404 ELRNGFPAEVLFTAK 418
           +LR G  +EV    +
Sbjct: 344 QLRAGMSSEVSIDTQ 358



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 75/226 (33%), Gaps = 14/226 (6%)

Query: 5   MWKNLKRNHP---ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           M  + +R  P   +S KR  LL  + ++ ++  S +  +      +     + N+  I +
Sbjct: 17  MASSHERGTPVSSSSWKRKGLLFGVPLLAVLLASAVYLMSGRYVETENAYVQANITPITT 76

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             SG +++  V+    + +G  L + +       +   +  ++ ++  + +EK+A D   
Sbjct: 77  QISGKVQQLAVKENQVVKKGALLFSLDAKTYQVAVKKAEAQLQQVKIDLRSEKAAYDEKL 136

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +  + +  FE           K      +            L           L    L
Sbjct: 137 AEVTLAKSRFE---------FNKRDQMRQENLRNQHFISDAQLDSSAQATTVSQLKIQTL 187

Query: 182 ENKSSLLRALLSSHQKDLTMMKN--LFEKNAVSQNDLNQQERIVYK 225
           +     LR  L    K    +    L  K  + Q  LN +   V  
Sbjct: 188 QKDLRRLREALGGDIKQPIELHPTYLAAKAVLEQARLNVERANVTA 233


>gi|294794154|ref|ZP_06759291.1| heat shock protein HtpX [Veillonella sp. 3_1_44]
 gi|294455724|gb|EFG24096.1| heat shock protein HtpX [Veillonella sp. 3_1_44]
          Length = 346

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 70/413 (16%), Positives = 129/413 (31%), Gaps = 91/413 (22%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV--VEIKSPFSG--II 67
           N+      + +  +I + G+  ++       +  +S  I+ + NV   E+   F G   I
Sbjct: 14  NNRKKCAGIMIAFLIILGGVSYYAYNQY--EAYIASHHIVLQGNVNLREVNVAFRGSDRI 71

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V+ G+ + QG  L      E    +   K +I      +   ++            
Sbjct: 72  ASLLVDEGAVVSQGQILGYLHSDELNLTVQQAKATIAAQDAIVAKLQAG----------- 120

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                                          S    +     R+ S        + ++  
Sbjct: 121 -------------------------------SRPEEIAQASARVTSAEAALAQSKQEAEK 149

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L+   ++               AVS+  ++  +  V  S  +L              NE 
Sbjct: 150 LQKSYNASNG-----------KAVSRQSVDDIQAKVKVSEAKL--------------NEA 184

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
               NL  A   +E   D+ Q Q       S+L   E    Q  + SPI G I   +   
Sbjct: 185 QQAYNLAVAGPRQE---DIAQAQAQLDAMKSELARQEFLLNQSVLTSPIDGVITA-RLLQ 240

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             + A  + P+ K+   +   ++R  V  + +  +  G  A V        + +     I
Sbjct: 241 VGDMASPNTPVFKLA-ENTKKWVRVYVNERDLGKIYNGMDANV---TTDTNKNEPIHGTI 296

Query: 368 EKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             I  +      S +  +++T   YEV + + D    DN + L  G PA V  
Sbjct: 297 GYISSVAEFTPKSVETKDVRTTLVYEVRVYVDDP---DNRLRL--GMPATVSI 344


>gi|306846309|ref|ZP_07478870.1| HlyD family secretion protein [Brucella sp. BO1]
 gi|306273304|gb|EFM55173.1| HlyD family secretion protein [Brucella sp. BO1]
          Length = 405

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 90/289 (31%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 129 IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 188

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++  +L     +  +   +I  L          
Sbjct: 189 TMARVQKLHETRFVAQSELDNAQSALDQARAKLAGADAQIASAKANIAVL---------- 238

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                     +   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 239 -----EAQYNEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 292

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P     
Sbjct: 293 IAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAV 348

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++IT    +  + ++R G    V    +
Sbjct: 349 FSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDTR 397



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/257 (10%), Positives = 65/257 (25%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +   +  +    +D     +       +
Sbjct: 97  VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 156

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 157 RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSALDQ 216

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              ++          +   ++L A  +        ++ L    A                
Sbjct: 217 ARAKLAGADAQIASAKANIAVLEAQYNEAASSTKSLE-LARDKAARDLSFTSLRAPFDGV 275

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +     + I  L     L      KE      +   T    +  +   +  
Sbjct: 276 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETQLAHIKVGETAHIYVDAIDGTKFD 335

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 336 GKVASI-APASGAVFSL 351


>gi|158320303|ref|YP_001512810.1| secretion protein HlyD family protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158140502|gb|ABW18814.1| secretion protein HlyD family protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 397

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 58/386 (15%), Positives = 130/386 (33%), Gaps = 61/386 (15%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           + + GE+     + EI   F   + +  V+ G Q+    PL+  +  E    +       
Sbjct: 54  IVAWGEVKYA-RMKEINVDFPSTVTQVMVQEGDQVTLRQPLVLLDLSEYNGNV------- 105

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           K L   +   +SAL         L+   E  + Q+     +Y S  +             
Sbjct: 106 KKLEHQLSANQSALLIAEQDISALQADIEQTQGQIARKFKEYDSNTN------------- 152

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                          + L+N  +L    L S ++DL   + L+E  AVS+  ++Q + +V
Sbjct: 153 ------------AEMVLLQNSLNLAYDELVSAKEDLQNYQTLYEAGAVSKAMVDQYKTMV 200

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                 + +     +     + E  D+ N+   +  +++S+    N      +   ++  
Sbjct: 201 DGRQKAVEDIETNLQKTKSALKEELDKLNVLLKSKQEQLSQQQRGNTVNVTKQQGSISSA 260

Query: 284 EKTREQKTILSP-------------IAGTIVYNQSFSSS--NYAQQSQPLMKIVPHSKLT 328
           +   +   + +                G +        S       +  +++I+  +   
Sbjct: 261 QVDLDAMRVKTEKEYLQGNQIVSDIKNGIVQNIAVHEGSHLGVQGSATRVLQII-DADSI 319

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            I A+V  + I++V  G    +      D         + +I  +  +++          
Sbjct: 320 MISAEVDEEFIRNVHVGEVVEIVPTSVPDS---SLTGTVVQIPAMAVEKNGRRIIY---- 372

Query: 389 VILKITDLAFSDNNIELRNGFPAEVL 414
           V++K  D      +  L+ G+ A+V 
Sbjct: 373 VLIKPNDP-----DHLLKPGYTADVY 393


>gi|121602426|ref|YP_989350.1| MFP family transporter [Bartonella bacilliformis KC583]
 gi|120614603|gb|ABM45204.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Bartonella bacilliformis KC583]
          Length = 368

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 96/321 (29%), Gaps = 28/321 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L+  I    + L+       V       + + L       +          +++  ++L 
Sbjct: 56  LQGDIAAIATKLNGYIQDIPVDANQAVKKGDVLFHLKRDDYQNSLDQAEANLNTQQKTLM 115

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               ++ +      +   +     A+ ++ +  L     L   + V+Q++++  +    +
Sbjct: 116 RIDAQITAARSALDEARAQKDAASAVATNAKLTLERATQLKADSYVAQSNVDNAKSAYEQ 175

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +   +     +      +I     EA  +      +    +                 E 
Sbjct: 176 AVANVTRTDAQIAAARANIR--ILEAQQDEVKSQTKSLELMRDK-------------AEY 220

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                T+ +P  G I    + +        Q L  +VP   + Y+ A     Q++++  G
Sbjct: 221 DLNSTTLHAPFDGIIGNLTAKTGDFVVN-GQRLAALVPTH-VLYVDANYKETQLKNIHSG 278

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLA 397
            TA V    + +      K  +  I P           Q      T+    V ++I   A
Sbjct: 279 QTAYVTVDAFKNE---VLKGTVLSISPATGAIFSLLPPQNATGNFTKITQRVPVRIAIPA 335

Query: 398 FSDNNIELRNGFPAEVLFTAK 418
            +  +   R G    V    +
Sbjct: 336 DALKSGRFRAGMSVSVTIDTR 356



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/151 (11%), Positives = 48/151 (31%), Gaps = 9/151 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTF--ED-----IETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           G I+   V+    + +G  L     +D      +    ++ ++ ++  +   I   +SAL
Sbjct: 69  GYIQDIPVDANQAVKKGDVLFHLKRDDYQNSLDQAEANLNTQQKTLMRIDAQITAARSAL 128

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D    + D    +  +   +L           S V    + +   + +  +  +      
Sbjct: 129 DEARAQKD--AASAVATNAKLTLERATQLKADSYVAQSNVDNAKSAYEQAVANVTRTDAQ 186

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
                    +L A     +     ++ + +K
Sbjct: 187 IAAARANIRILEAQQDEVKSQTKSLELMRDK 217


>gi|22087261|gb|AAM90902.1|AF493605_5 SilD [Streptococcus pyogenes]
 gi|253559382|gb|ACT32354.1| SilD [Streptococcus pyogenes]
 gi|253559403|gb|ACT32373.1| SilD [Streptococcus pyogenes]
          Length = 454

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 56/395 (14%), Positives = 138/395 (34%), Gaps = 28/395 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R H      + L S++ +  L+ +S+    EI+++S GE+     +  ++S     I   
Sbjct: 14  RRHHNFATFLILPSVLLVSFLVLFSLFAKKEITITSQGEMTPTKVIASVQSTSDHTIVVN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDVL 127
            ++N   I +G  ++ +            +  +  L      +   K++L+   N +   
Sbjct: 74  NLKNNKFIKKGDVIIQYSKTMENSQKKALEKQLATLNKQKNGLQILKTSLEQETNLFKGE 133

Query: 128 EK--------AFESREEQLLDFLGKYHST---CSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           ++         F  + + ++    K ++     + + N+ IS +   L     ++     
Sbjct: 134 DEFGYSDTFNHFLKQTQDIIIGFAKKNAEVNNQASLANHAISVITSQLDELHQKITDYEE 193

Query: 177 NRLDLENKSSLL------RALLSSHQKDLTMMK--NLFEKNAVSQNDLNQQERIVYKSTL 228
            +  + N+   L      +  L  +Q      +  +  ++  +SQ   N  E     + L
Sbjct: 194 LKRAINNQEYKLSPENPHQTALKKYQTQFQAQEDNSALKEEYLSQISQNISELESSMANL 253

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            ++       N+         + ++    +L+  S+ L   +    +   ++       +
Sbjct: 254 SIQR--ASTGNLSLPDTSHRIKIDILKTQFLQNASQQLTTVENQITELKDQIEQANIQLK 311

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK---LTYIRAKVTPKQIQHVKKG 345
              I++P  GTI  N  F   +       + +I P  +     +I   VT + +  +K+ 
Sbjct: 312 NNIIIAPETGTIHLNSEFEGKSLIPNGSEVAQIYPDIQKIKEVFITYYVTSEHVSLLKEK 371

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
               +      +         I+ ID   ++ D  
Sbjct: 372 QGVRLSLEKVGNQ-TLTINGTIQTIDKSATKTDQG 405


>gi|322386125|ref|ZP_08059759.1| competence factor transporter ComB [Streptococcus cristatus ATCC
           51100]
 gi|321269817|gb|EFX52743.1| competence factor transporter ComB [Streptococcus cristatus ATCC
           51100]
          Length = 451

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 66/450 (14%), Positives = 153/450 (34%), Gaps = 38/450 (8%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R + +   R+ L +   +I ++ +S+    EI+++S   I     +  I+S  +  I   
Sbjct: 14  RRYSSFSVRVILPTFFLLIFVVLFSLFAKKEITITSGASIEPSKILANIQSTSNNAIVTN 73

Query: 71  QVENGSQILQGTPLLTF----EDIE---TTDLIDLKKVSIKNLRCHIDTEKSA-LDFLNN 122
            ++    + +G  L+ +    E+ +    +  ++  K   + L    ++ K+    F   
Sbjct: 74  NLKENKVVKKGDLLVQYKSDSENTQKETFSSQVESLKEQKRQLELLQESLKTGTSQFSGE 133

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVF---------NYGISSVYRSLKMKLTR--- 170
                E+AF   + Q            S +             + ++      KL     
Sbjct: 134 DRFGYEQAFNDYKNQAASIRSNTEQQNSTIASQNSAASNSQAELGNLINETNAKLADYQT 193

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +R+   N   + + ++      +   +     +   +   +SQ D   Q      +    
Sbjct: 194 LRNAIQNGTSVPSTNAGYSIYQAYETQAAADSQGQLKSQVLSQID--SQISQFESALAGY 251

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R           +   L  +     A  L ++ ++L    +   +  + L +     ++ 
Sbjct: 252 RVQYAGSGAQQAYSGSLDSQLESLKAQQLTKVGQELTALNQKILEVENNLKVQGGITQKG 311

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYT 347
            I +   G +  N   + +N   + + L ++ P     K   I   VT K +  +KKG  
Sbjct: 312 MITATEDGILHLNPETAGANLVPEGKLLAQLYPVLTKEKKVVITTYVTSKDVASLKKGE- 370

Query: 348 ATVRFPHYA-DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            T+RF     + +E   K+ I  ID   ++ +       +++V  +IT        +   
Sbjct: 371 -TLRFTAMDGNNKEFVLKSKISNIDSNATKTEKG----NFFKVEAEITLTGAQAKKVRY- 424

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
            G     +    + T     +    D + +
Sbjct: 425 -GIEGRAVVITGSKTYFDYYL----DQFLR 449


>gi|226953240|ref|ZP_03823704.1| secretion protein HlyD-like protein [Acinetobacter sp. ATCC 27244]
 gi|226836015|gb|EEH68398.1| secretion protein HlyD-like protein [Acinetobacter sp. ATCC 27244]
          Length = 355

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 90/291 (30%), Gaps = 27/291 (9%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +  F  + E L     + +          ++    +L ++    +S   +  +  +    
Sbjct: 77  DNQFVKKGETLAVLDQRDYQARLNQAKSLVTLKEAALAVQEQNEKSAQSSIHEANSGVLA 136

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A LS  +KD    ++L +   +++ +    +     +  +L   +            L
Sbjct: 137 AQADLSRLKKDFLRYQDLLKDGVITRQNFENIQSQYLSAQAQLSRALAGVNAAEAQFGSL 196

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                               Q      +  + L + +       I+SP+ G +       
Sbjct: 197 K---------------ASRAQLLADIQNAKASLDLYQIDLASARIISPVTGKVGSLAI-Q 240

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             +       LM I+P     Y++A     QIQ +  G T +++   Y  +        I
Sbjct: 241 KGSRVSPQTRLMAIIP-DNSLYVQANFKETQIQKMHIGQTVSLKLDAYPSLTY---TGKI 296

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPA 411
           E   P           +  T  + +V+ +I     +  S +   ++ G   
Sbjct: 297 ESFSPASGATFSLMPPDNATGNFNKVVQRIPVRIAIDPSPHIELIKPGMSV 347


>gi|330864188|emb|CBX74250.1| hypothetical protein YEW_KY46690 [Yersinia enterocolitica W22703]
          Length = 183

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 47/109 (43%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R      +R      + ++ ++ WSI   ++I  S++G+++  ++   I+S   G++ 
Sbjct: 43  VERPVAPLARRTAWFLALTLLLVLVWSIAGRLDIHASANGKVIVAEHSKIIQSLEPGVVV 102

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
              V +G +++ G  LL    I     ++     + +         + L
Sbjct: 103 AINVHDGDRVVAGQVLLELNPIGVDAEVNNINQQLMHRSLEAARMSALL 151


>gi|149177170|ref|ZP_01855777.1| probable membrane protein [Planctomyces maris DSM 8797]
 gi|148844062|gb|EDL58418.1| probable membrane protein [Planctomyces maris DSM 8797]
          Length = 493

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 59/430 (13%), Positives = 124/430 (28%), Gaps = 87/430 (20%)

Query: 23  LSIIGIIGLITWSI----LLPIEISVS------------------SSGEILNEDNVVEIK 60
           + I G + LITW+       P +++V                   ++G +      V + 
Sbjct: 12  VLIFGFLALITWAARDFIFPPRQVTVMPVIVTQASIRNAGTPLFQAAGWVEPRPTPVRVA 71

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +   G+I++  V    ++ +G P+      +    +      +K     +   K+ L   
Sbjct: 72  ALSPGVIEELLVVEDQKVKRGEPIALLVKEDAALSVRAATADLKLREAELKQAKATL--- 128

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                                        ++V          +L+     +  I     +
Sbjct: 129 ---------------------------AAAEVRLAQPVHREATLRAAEAELAKIETELKN 161

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L       ++ L+  Q D    + L  K AVSQ  +++    +  +     E    Q ++
Sbjct: 162 LPFMVRRAQSELNFAQNDYK--RRLSAKAAVSQRAVDEALTALESARAAAEELEGRQVSL 219

Query: 241 LRHINELYD---------EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +     L           E   E      E    ++            +   + T ++ T
Sbjct: 220 VAERKALKSRCDALSKELELLTEETQARDETIAIIQAATARLDQARVAVDQAKLTLDRMT 279

Query: 292 ILSPIAGTIVYNQSFSSSNYAQ--------QSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           I +P++G I        S+               ++ +    ++  +R  V  + I  V 
Sbjct: 280 IRAPVSGRIYRLIGHPGSSVGNMLTQMSSHDGSTVVTMY-QPEMLQVRVDVRFEDIPKVS 338

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
                 +  P  ++         +  I      Q N LQ      V + I        N 
Sbjct: 339 LDQPVEINNPALSESVT----GKVLFISSEADIQKNTLQ------VKVDIDAA-----NP 383

Query: 404 ELRNGFPAEV 413
            L+     +V
Sbjct: 384 VLKPEMLVDV 393


>gi|170690033|ref|ZP_02881200.1| secretion protein HlyD family protein [Burkholderia graminis C4D1M]
 gi|170144468|gb|EDT12629.1| secretion protein HlyD family protein [Burkholderia graminis C4D1M]
          Length = 366

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 93/298 (31%), Gaps = 21/298 (7%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V +  F    + L+    + +          + S   ++     +             ++
Sbjct: 79  VRDNQFVHANDVLIQLDARDYDARLAQARAEVRSAQAAVIELQAKKSLQLATINQQAAEA 138

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L+    D T  + L + +AVS   + + +  + K+   +  +        R I 
Sbjct: 139 RASGAELTRSAADQTRYRELVKDDAVSNQVVERADADLVKARAAVDRSAAALTAAQRQIA 198

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L                  +   +   A   +   +     E  TI +PI G I  N++
Sbjct: 199 VL---------------DAQIGDAEARIATAQAAERVAALNVEYTTIRAPIDGYI-GNRT 242

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A    PL+ +VP     +I A     Q++ ++ G +  V    ++       ++
Sbjct: 243 ARVGVLASAGVPLLTVVPSGG-LWIDANFKEDQLKKMRVGDSVDVDLDAFSTPIHGVVES 301

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +        S       T  + +++    +++      +    LR G  A V     +
Sbjct: 302 LAPATGATFSVLPAENATGNFTKIVQRVPVRVHLTVPKNMEGALRPGLSATVKVHVDS 359


>gi|58040510|ref|YP_192474.1| multidrug resistance protein MdtN [Gluconobacter oxydans 621H]
 gi|58002924|gb|AAW61818.1| Putative HlyD-family protein [Gluconobacter oxydans 621H]
          Length = 422

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 50/419 (11%), Positives = 126/419 (30%), Gaps = 98/419 (23%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +  +  +  +G+  L     +   + +  SS     +  +V + S   G +K+  V  
Sbjct: 83  KPIGIVIAVVCVGVAVLFG-VHVSHEDSTHPSSDSGSIDAEMVHVASTVGGRLKELDVSV 141

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L   +        +  +++++  + ++D                       
Sbjct: 142 NQHVHKGDVLYRLDP-------EPYELTVRQAQANLD----------------------- 171

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                                 ++S     + +L  +++      D  ++    +     
Sbjct: 172 ----------------------LASAEVENQTRLLSIKTSNAATAD--DQVVRAQTNRDL 207

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             + +  ++ L  K+ +     +Q    ++ + + L ++ ++       I +L       
Sbjct: 208 AARTVQRLQPLAGKSYIPWQQYDQARVALHDAEVSLAQSRNQSAAATTAIGDLKSSIAAR 267

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A+                    + L        Q T+++P+ G +   +          
Sbjct: 268 DASQ-------------------AALDHARYELRQTTVIAPVDGYVTSLRV-KPGEVLAP 307

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--- 371
           SQ L  ++      Y  A +    +  V+ G   TV      D R    +  +E I    
Sbjct: 308 SQVLFTLI-ADDEWYATANIREINLGAVQIGDCVTVH--SMIDRRTP-LRGHVESIGWGV 363

Query: 372 ------------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                       PI+ +Q + +   + + V +++       N + LR G  A V     
Sbjct: 364 LSADSAGIARSLPIVPRQMDWVHVAQRFPVRIRLEKA----NPLLLRLGATATVEIRHG 418


>gi|193077396|gb|ABO12200.2| RND family drug transporter [Acinetobacter baumannii ATCC 17978]
          Length = 293

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 100/310 (32%), Gaps = 34/310 (10%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           ++ L N   V++K          D+  +Y    S V     S    +L ++    +S   
Sbjct: 9   MELLINDNQVVKKGETLAVLDHRDYQARYDQARSVV-----SLKEAALGVQQQNEKSARS 63

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           + ++  +     +A L+  +K+    ++L +   +++ +    +     +  +L +    
Sbjct: 64  SIIEANSGVVAAQADLARLKKEFERYQDLLKDGVITRQNFEGIQSQYLTAQAQLSKAQAA 123

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                  +  L                    Q         + L + +       ++SP+
Sbjct: 124 VNAAEAQLGSLQ---------------ASRAQLLADIQSSHANLNLYQVDLASSKVVSPV 168

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G I         +       LM I+P +   Y++A     QI+ +  G    ++   Y 
Sbjct: 169 SGKIGSLAI-QKGSRVSPQTRLMAIIPENS-LYVQANFKETQIEKMHIGQKVKLKLDAYP 226

Query: 357 DIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIEL---RNGF 409
            +    F   IE   P           +  T  + +V+ +I      D++  +   + G 
Sbjct: 227 SLN---FTGKIESFSPASGATFSLMPPDNATGNFNKVVQRIPVRIAIDSSPHIDLVKPGM 283

Query: 410 --PAEVLFTA 417
              A V    
Sbjct: 284 SVSATVDLRT 293



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/206 (10%), Positives = 62/206 (30%), Gaps = 8/206 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  + +   + +G  L   +  +     D  +  +      +  ++       + 
Sbjct: 5   SGEVMELLINDNQVVKKGETLAVLDHRDYQARYDQARSVVSLKEAALGVQQQNEKSARSS 64

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTC--------SKVFNYGISSVYRSLKMKLTRMRSIY 175
                    + +  L     ++            ++    GI S Y + + +L++ ++  
Sbjct: 65  IIEANSGVVAAQADLARLKKEFERYQDLLKDGVITRQNFEGIQSQYLTAQAQLSKAQAAV 124

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                        RA L +  +      NL++ +  S   ++     +    ++    + 
Sbjct: 125 NAAEAQLGSLQASRAQLLADIQSSHANLNLYQVDLASSKVVSPVSGKIGSLAIQKGSRVS 184

Query: 236 EQKNMLRHINELYDEANLEFANYLKE 261
            Q  ++  I E        F     E
Sbjct: 185 PQTRLMAIIPENSLYVQANFKETQIE 210


>gi|109899087|ref|YP_662342.1| RND family efflux transporter MFP subunit [Pseudoalteromonas
           atlantica T6c]
 gi|109701368|gb|ABG41288.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           atlantica T6c]
          Length = 489

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 88/287 (30%), Gaps = 45/287 (15%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           QL        S+   +      ++   L+     + S   +   L+      +   +  Q
Sbjct: 73  QLNADFNDEVSSGQVIARIDDRTILSRLRQSEADLASSKASLTQLKAALKKAQTEATLAQ 132

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++    K L +KN VS ++L                +I E  N L  +     +A +   
Sbjct: 133 REFNRTKELKDKNLVSASEL----------------DISETNNALAKVAIETAQAAILVG 176

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-- 314
               E S+             S L   +   ++  I SP+ G ++  Q  +         
Sbjct: 177 EAQVEQSQ-------------SNLEQTKLDLDRTYIRSPVDGVVIDRQVDT-GQTVSASL 222

Query: 315 -SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            +  L  I        I A V    I  + K          + + +   F  ++ ++   
Sbjct: 223 SAPTLFSIAQDLVKMQIEADVDEADIGRIAKDQKVNFTVDAFPERK---FAGVVSQVRKA 279

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +  +N +     Y+VI+ +      +  + L  G  A V       
Sbjct: 280 ATVTNNVVT----YKVIISV-----ENEQLLLLPGMTANVDVILGER 317



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 61/176 (34%), Gaps = 3/176 (1%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            L  IE +V+SSG I     V  + S  SG+I +   +   ++  G  +   +D      
Sbjct: 41  SLGDIESTVNSSGTISPVVTV-LVGSELSGLISQLNADFNDEVSSGQVIARIDDRTILSR 99

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   +  + + +  +   K+AL     +  + ++ F   +E     L           N 
Sbjct: 100 LRQSEADLASSKASLTQLKAALKKAQTEATLAQREFNRTKELKDKNLVSASELDISETNN 159

Query: 156 GIS--SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            ++  ++  +    L     +  ++ +LE     L         D  ++    +  
Sbjct: 160 ALAKVAIETAQAAILVGEAQVEQSQSNLEQTKLDLDRTYIRSPVDGVVIDRQVDTG 215


>gi|255527102|ref|ZP_05393990.1| secretion protein HlyD family protein [Clostridium carboxidivorans
           P7]
 gi|296187891|ref|ZP_06856284.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
 gi|255509204|gb|EET85556.1| secretion protein HlyD family protein [Clostridium carboxidivorans
           P7]
 gi|296047512|gb|EFG86953.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
          Length = 350

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 53/389 (13%), Positives = 106/389 (27%), Gaps = 88/389 (22%)

Query: 41  EISVSSSG-EILNEDNVVE----IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           +  V   G  ++ + NV      I S  +G I   ++  G  I  G  L+T ++      
Sbjct: 31  DKIVKQQGDHLIVQGNVETKEVNINSKVAGKITAIKIAEGDSIKNGQVLITIDNSTLVAK 90

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
               K  I      +   ++A      +    +      E                    
Sbjct: 91  EAQSKAQIDAATGQMKAAEAAKSAAQAQLQKAQNGARPEE-------------------- 130

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                                         +  ++     +     +  L+ K   ++ D
Sbjct: 131 -----------------------------IAQAKSQYDLSKSTYDRVNGLYSKGYAAKED 161

Query: 216 LNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLEFANYLKEISRD---LEQNQR 271
           L++ +  +     +        +   +  +     +A+     Y  +I +      + Q 
Sbjct: 162 LDKAKTAMDVYEKQYDVAKDGARSEDIAALQAQVSQADATIQGYQAQIKQAEGGQSEVQT 221

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             AD               TI +P  G +                PL+ +   +   +I 
Sbjct: 222 YIAD--------------TTITAPADGIVNQLNV-EVGELVSTGMPLLVMTNTTAP-WIE 265

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS------QQDNNLQTQE 385
             V    +  VK     +V+   Y + +   FK  I +I+            DN      
Sbjct: 266 CNVKETDLSKVKLNGEVSVKLSSYPNQQ---FKGKIVRINKDADFAVKRATNDNGEFDVL 322

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
            Y V +++ D+     N  L  G  A V 
Sbjct: 323 SYGVKVELIDM-----NKPLHAGMTAFVD 346


>gi|94498316|ref|ZP_01304875.1| putative hlyD family multidrug secretion protein [Sphingomonas sp.
           SKA58]
 gi|94422196|gb|EAT07238.1| putative hlyD family multidrug secretion protein [Sphingomonas sp.
           SKA58]
          Length = 382

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 82/299 (27%), Gaps = 22/299 (7%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V+E     + + L +   + +   ++     I +   +     +++          + + 
Sbjct: 85  VIENQTVRQGQSLAELDPREYRAQTEQITSQIETATAAGDTTRSQISEQQATIAQAQAQL 144

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              RA  +   + +T  + L    A       Q +                Q    R   
Sbjct: 145 DAARAEAAFAAQQVTRYQPLAASGAEPGERFAQLQ---------------TQARQARERT 189

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                A +     +  +S  + Q Q       ++L +     E   + + I G +     
Sbjct: 190 NAAHAALIAAQRRVGTLSAQVRQAQSQAEAARAQLKVARVNVESTVLKAAINGRVGDLAV 249

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA-----DIRE 360
                + Q    LM +VP     +I A     Q+  ++ G    +               
Sbjct: 250 R-VGQFVQPGTRLMTLVPVD-RLFIEANFKETQLGLMRVGQPVGIEIDALPGVELTGRIA 307

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   +   +  Q      T+    V ++I   A  +    L  G    V    ++
Sbjct: 308 SVAPGTGAQFSVLPPQNATGNFTKIVQRVPVRIAIDAPLEVRRLLVPGMSVGVTVDTRS 366



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/239 (11%), Positives = 68/239 (28%), Gaps = 7/239 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V     + QG  L   +  E     +     I+      DT +S +       
Sbjct: 78  GYVERVFVIENQTVRQGQSLAELDPREYRAQTEQITSQIETATAAGDTTRSQISEQQATI 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFN-----YGISSVYRSLKMKLTRMRSIYLNRL 179
              +   ++   +      +         +        + +    +    R  + +   +
Sbjct: 138 AQAQAQLDAARAEAAFAAQQVTRYQPLAASGAEPGERFAQLQTQARQARERTNAAHAALI 197

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             + +   L A +   Q      +   +   V+  +    +  +     +L   + +   
Sbjct: 198 AAQRRVGTLSAQVRQAQSQAEAARAQLKVARVN-VESTVLKAAINGRVGDLAVRVGQFVQ 256

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
               +  L     L      KE    L +  +    E+  L  +E T    ++ +P  G
Sbjct: 257 PGTRLMTLVPVDRLFIEANFKETQLGLMRVGQPVGIEIDALPGVELTGRIASV-APGTG 314


>gi|327189565|gb|EGE56718.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CNPAF512]
          Length = 404

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 87/267 (32%), Gaps = 16/267 (5%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L     ++ +  L+   ++ +     A L+  Q     ++       ++Q   ++ +
Sbjct: 140 QNALDQAQAQIATEQLSLQRIDAQIEGANASLAQAQAQKVALEAAVRGAEITQKRQSELQ 199

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFADEMSK 279
                +  +L  +           N    +AN+  A     I     ++ + +       
Sbjct: 200 AKSVGTAADL--DNANIALDQAKANLAGGDANITAAQANITILQAQRKEAEGSVRALEIS 257

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                +      + +P  G IV N+S    +     Q LM +VP  +  YI A     QI
Sbjct: 258 RDKAARDLSFTVLKAPYDG-IVGNRSVQEGDLVSPGQRLMALVPVHE-LYIDANFKETQI 315

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVIL 391
           QH+  G    V    Y+D         +E I P           +      T+    V +
Sbjct: 316 QHLVAGSKVNVHVDAYSDH---PVVGTVESISPASGSVFSLLPPENATGNFTKVIQRVPV 372

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAK 418
           +I     + ++  LR G    V    +
Sbjct: 373 RIALPQDALDSGRLRAGLSVVVDVDTR 399



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/156 (10%), Positives = 48/156 (30%), Gaps = 5/156 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E ++  I    +G + K  V    ++  G  L T ++ +  + +D  +  I   +  +  
Sbjct: 100 EGDIATISPKVTGYVAKVNVVANQEVKAGDVLATLDNGDYQNALDQAQAQIATEQLSLQR 159

Query: 113 -----EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                E +       +   +      R  ++           S      + +   +L   
Sbjct: 160 IDAQIEGANASLAQAQAQKVALEAAVRGAEITQKRQSELQAKSVGTAADLDNANIALDQA 219

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +     N    +   ++L+A     +  +  ++
Sbjct: 220 KANLAGGDANITAAQANITILQAQRKEAEGSVRALE 255


>gi|288960273|ref|YP_003450613.1| multidrug resistance protein A [Azospirillum sp. B510]
 gi|288912581|dbj|BAI74069.1| multidrug resistance protein A [Azospirillum sp. B510]
          Length = 379

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/375 (12%), Positives = 109/375 (29%), Gaps = 82/375 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + ++  +    S  ++  +V     +  G  L   +D +           +      + 
Sbjct: 54  VQSDITVVSPKISAYVRDVKVAENQLVRAGDVLAILDDQDFRA-------KLAETEAAVT 106

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +K+AL  L++K                           ++    I     +L       
Sbjct: 107 AQKAALGTLDSKL--------------------------ELQRTMIDQAAATLASAEAEQ 140

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           R                       Q++    ++L   +  S+  L   +  + K+  ++ 
Sbjct: 141 R---------------------RAQQEYDRSRSLASDSWTSRQKLETADADLRKAVAQVL 179

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           ++     +    IN L                    + +   A   + L       +   
Sbjct: 180 KSRAALASENEQINVL---------------RATRTETEAHLAQSQATLQTARNDLDNTI 224

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P+ G +V N+      YA+    L+ +VP   +  + A     Q+  ++ G   ++ 
Sbjct: 225 IHAPVDG-VVGNRGVQVGQYARPGVQLLSLVPLPDVYVV-ANFKETQLSRMRPGQHVSIS 282

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNI--- 403
              + D R      ++    P    +         T  + +++ ++   +A   +N    
Sbjct: 283 VDAFPDRR---LDGMVASFAPASGSKFSLLPPENATGNFTKIVQRVPVRIALPRDNALSG 339

Query: 404 ELRNGFPAEVLFTAK 418
            LR G         +
Sbjct: 340 LLRPGLSVVAEVDTR 354


>gi|318040214|ref|ZP_07972170.1| membrane-fusion protein [Synechococcus sp. CB0101]
          Length = 446

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 51/371 (13%), Positives = 119/371 (32%), Gaps = 68/371 (18%)

Query: 23  LSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           + + G+ G ++ W++  P+   V  +G ++  +N   + +   G +++  V  G  + +G
Sbjct: 35  VCLAGVTGSVVLWALFWPVPTEVKGTGVLIYPENAGILNARSGGQVREVFVRVGQTVKRG 94

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L+                 +  L   ++ ++  L  L    + L+   E R       
Sbjct: 95  QVLMQL--------------YLPVLERQLEQQRGNLRQLERHNEKLDYRDELR------- 133

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                                     LT  R++        +       L S++   L  
Sbjct: 134 -------------------------LLTEKRALDTALAKYSDDRRRYGELQSTYSSKLRN 168

Query: 202 MKNLFEKNAVS--QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           +  L ++  V+    ++   E+ +  +++    N+ E K   R++   Y +  L      
Sbjct: 169 LDWLAKREVVAPLSTEVVSAEQGLTSTSV----NLDEVKINERNVVTSYQQVKLNIETQA 224

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            +    ++  +R  A   +K+           + +   GT++  Q           Q L 
Sbjct: 225 LQRRYQIDDLKREIAVTQAKIAY------DGKVHAERDGTVLDLQVI-PGQTVSTGQRLG 277

Query: 320 KIV-PH-----SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDP 372
            I  P       +     A   P   + +  G    V  P +    R       + ++  
Sbjct: 278 TIGRPEQPNAKDRPLKAVAYFPPADARRLPLGLPVEV-VPLWKQRGRFGGIVGKVTQVLT 336

Query: 373 IISQQDNNLQT 383
           + + +D+   T
Sbjct: 337 LPATEDDISTT 347


>gi|190893078|ref|YP_001979620.1| protein secretion protein, HlyD family [Rhizobium etli CIAT 652]
 gi|190698357|gb|ACE92442.1| probable protein secretion protein, HlyD family [Rhizobium etli
           CIAT 652]
          Length = 337

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/359 (11%), Positives = 98/359 (27%), Gaps = 88/359 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + + +V+ G  +  G  L   +       +   + +   LR  +D  K+        
Sbjct: 56  SGRLSELRVDEGDVVKSGAVLAKLDATPNELAVRSAEANAAALRATLDKLKAG------- 108

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                     R  ++      Y  + + + N  ++                         
Sbjct: 109 ---------PRPTEIAQARAAYDESLADLQNANLA------------------------- 134

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                              + L  +  +S+  L+Q       +    +      K +   
Sbjct: 135 ---------------YDRARQLRPQGTISEASLDQATAAKAMAAARSQSAREALKLLQEG 179

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                              + D+           + L     +     + +P  G I+  
Sbjct: 180 SR-----------------NEDIAAADAQLKAAEATLASARTSLADTELRAPNDGVILS- 221

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +   +      +  +  ++  ++  ++R+ V    +  +  G   +V         +K +
Sbjct: 222 RVRENGAIVSPADTVF-VLSLTEPVWVRSYVAEPDLGRLHPGMKVSV---ASDTAPDKPY 277

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +  I  I P+      S +   L+T   Y + + I          +LR G P  V  + 
Sbjct: 278 EGTIGFISPVAEFTPKSVETPELRTDLVYRLRIVIDKPGP-----DLRQGMPVTVRLST 331


>gi|328952100|ref|YP_004369434.1| secretion protein HlyD family protein [Desulfobacca acetoxidans DSM
           11109]
 gi|328452424|gb|AEB08253.1| secretion protein HlyD family protein [Desulfobacca acetoxidans DSM
           11109]
          Length = 365

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 98/303 (32%), Gaps = 11/303 (3%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K   +    +  +   + +  + QL     +  S   +V    I   Y + +++ T + +
Sbjct: 63  KDRGETAARRELLARLSSDQIQAQLDQARDRMLSWQERVQQAEIDLDYTASQVQ-TDIAA 121

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                  +  +     A+L  ++ D     +L+ +    +  L+        +       
Sbjct: 122 SQARVAAVRARIEEAAAVLEKNRLDFHRYDSLYARRVAPKQKLDDAVANYQAADANKAAL 181

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             E       ++             ++    +L+  + + A   + L   E   +   I 
Sbjct: 182 TKELSLAQAQLDRAEL-----LPRTVELKRAELQMARASLAAAQAALREAEANLQDTFIY 236

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
            P AG I+  +            PL  +V      Y++  +    I  ++ G  A +   
Sbjct: 237 CPAAG-ILLTREIEPGEVVNPGTPLFTLV-DLNQLYLKVFINEPDIGKIRLGQEARIYVD 294

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            + D     FKA + ++ P        ++T E    ++   +L   +    L+ G P E 
Sbjct: 295 AFPDR---PFKARVSRVSPRAEFTPKYVETLEERVKLVFAVELRAENPEGFLKPGMPGEG 351

Query: 414 LFT 416
           +  
Sbjct: 352 VIR 354


>gi|306821543|ref|ZP_07455143.1| RND family efflux transporter MFP subunit [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550437|gb|EFM38428.1| RND family efflux transporter MFP subunit [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 486

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 44/355 (12%), Positives = 112/355 (31%), Gaps = 64/355 (18%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V+ G ++ +   L   +  +  + I + +  +   +  +  + S    +    + 
Sbjct: 80  VVEINVKEGDKVQKNQILARLDTKDLKNEIAILEKEVAYEQIRLQEQYSDAGNVYTSTES 139

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L+ A        LD     ++     FN  + ++ +                        
Sbjct: 140 LKLA--------LDDAKLRNTNAKIAFNQAVDNLKKQ----------------------- 168

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                           ++LF   A  + D+   +    ++ + L     + +   +   E
Sbjct: 169 ----------------EDLFAAGAAPEQDVQNAKNAKEQAEVSLE----QSEVAYKQAQE 208

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             ++   +  N +K+ +   E  + + + +++ L           I SPI+GT+    + 
Sbjct: 209 SMEKGQHDINNAVKQATPK-ESARASLSIKLATLQQKRDKLNDLNIKSPISGTVTRVYA- 266

Query: 307 SSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                A+ ++    M I+      ++ AKV    I  +K     T+             K
Sbjct: 267 KLGRTAKDTENNRAMFIIEDESRKFLVAKVGQYDISDIKLNQEVTITSDVLGKDSA---K 323

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             + +I P   +      T      I+    +  + ++  L  G  A+      +
Sbjct: 324 GTVSRISPTGEKSSTANNT------IVIPVKILVTKSDNRLITGVSAKAKIKTDS 372


>gi|189424691|ref|YP_001951868.1| secretion protein HlyD [Geobacter lovleyi SZ]
 gi|189420950|gb|ACD95348.1| secretion protein HlyD family protein [Geobacter lovleyi SZ]
          Length = 368

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 90/295 (30%), Gaps = 30/295 (10%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R+ QL+          +  +   +      L +         L            R    
Sbjct: 87  RDNQLVKKGDLLVMLDANDYRVAVDKAEAELGIARNETSGDRLQVAASRAAVQSARIQRD 146

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             + DL     LF K  + +  L++ +     S   L++     K     I  +  E+  
Sbjct: 147 QAELDLKRGTALFGKEVIPREQLDRLQTAQQLSEARLKQAEESLKKDQA-IAGISGESTN 205

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +     ++ +  LE+N+                     I++P+ G I            Q
Sbjct: 206 KARIRKQQAA--LEENRLKLG--------------YTRIVAPVDGYITRKGV-EVGATVQ 248

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q LM +VP S   +I A     Q+ H+K G   T R   Y       FK  ++ I   
Sbjct: 249 PGQALMAVVPLSNT-WITANYKESQLTHIKPGQQVTFRVDSYPGQT---FKGTVDSIMAG 304

Query: 374 ISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                        T  Y +V+    +KI   + SD    LR G   E       T
Sbjct: 305 TGAAFSLLPPENATGNYVKVVQRIPVKIKIDSSSDPRHLLRVGMSVEPTVLTGRT 359



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/146 (9%), Positives = 45/146 (30%), Gaps = 3/146 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V +   + +G  L+  +  +    +D  +  +       +T    L    ++ 
Sbjct: 79  GTVTTVLVRDNQLVKKGDLLVMLDANDYRVAVDKAEAELG--IARNETSGDRLQVAASRA 136

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            V     +  + +L    G        +    +  +  + ++   R++    + L  +  
Sbjct: 137 AVQSARIQRDQAELDLKRGTALFGKEVIPREQLDRLQTAQQLSEARLKQAEES-LKKDQA 195

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNA 210
            + +    ++  +       L E   
Sbjct: 196 IAGISGESTNKARIRKQQAALEENRL 221


>gi|147679136|ref|YP_001213351.1| multidrug resistance efflux pump [Pelotomaculum thermopropionicum
           SI]
 gi|146275233|dbj|BAF60982.1| multidrug resistance efflux pump [Pelotomaculum thermopropionicum
           SI]
          Length = 357

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 53/368 (14%), Positives = 114/368 (30%), Gaps = 49/368 (13%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF--------------LNNKY 124
            +   ++ F  +    L  L   S+   +  +  E+ +L                +  K 
Sbjct: 12  KKNKLIVAFLFLAIIALSALIIFSLHRRQASLSEERDSLTATGTVEAKNVTASFKVAGKI 71

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           + +  A  SR E+  +         +   N  + +   +L        S+ L    +E  
Sbjct: 72  EAIFAAEGSRVEEGQELAVLEAKEITAKLNQALGAHEAALAQARQAGESVPLTSQQVETA 131

Query: 185 SSLLRALLSSHQKDLTMMKNLFEK-------NAVSQNDLNQQERIVYKSTLELRENIHEQ 237
               RA ++  +  L   + L+E+        AV+Q   +  +     +   L+E     
Sbjct: 132 IDQARAKVAQAEVGLNDARLLYERTAKLWENGAVAQKSYDDAKNNYELAQNRLKEAQAAL 191

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              L         A L+      +    L Q+++            +   E   + +PI+
Sbjct: 192 DQALS--------ARLKVQVAQAQHEAALAQSRQAAGAVQE----AQVYLENTRLKAPIS 239

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I   +            P+ +I       Y++  ++ K+I  V+ G  A V    +  
Sbjct: 240 GYITQ-KFVEQGEMVNAGTPVFEITDLEHT-YVKVFISEKKIGRVRLGQDAEVTVDSFPG 297

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEY------YEVILKITDLAFSDNNIELRNGFPA 411
                    +  I+            ++Y      +EV + +      + ++ L+ G  A
Sbjct: 298 RVFP---GKVVWINDAGEFAVRKAVNEQYEHDIRSFEVKIDVP-----NPDLALKTGMTA 349

Query: 412 EVLFTAKN 419
            V      
Sbjct: 350 HVRILEGR 357


>gi|87124739|ref|ZP_01080587.1| Secretion protein HlyD [Synechococcus sp. RS9917]
 gi|86167618|gb|EAQ68877.1| Secretion protein HlyD [Synechococcus sp. RS9917]
          Length = 440

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 55/442 (12%), Positives = 129/442 (29%), Gaps = 94/442 (21%)

Query: 23  LSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
            S++G+ G  + W +  P+   V   G ++  +N   + +  +G +    V  G ++ +G
Sbjct: 25  ASLLGVGGIFLFWLVFWPVPTQVKGQGVLIYPNNAGVLNARATGQVLDVNVSVGDKVRKG 84

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L+T                                       VLE+  E ++  L   
Sbjct: 85  QVLMTL-----------------------------------YLPVLERQLEQQKGNLAQL 109

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           + + ++  ++     I++   +L   L ++        D + + + L+A   S  ++L  
Sbjct: 110 VRQ-NNELNQRDALRINTAQIALDTTLAKL-------ADDQARLAQLQATYGSKVENLNW 161

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              L ++  V+          +    +   + +      L  I     EA   F      
Sbjct: 162 ---LAKRAVVA---------PLSSEVVTAEQGLTSTSVQLDDIKIQRKEAVTNFQQIKLN 209

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           +  +         D   ++ + E       TI +  +G ++  Q        +    L  
Sbjct: 210 VETEQLNRNYQIDDLKRQIKVTEAQIAYDGTITAERSGIVLDLQVI-PGQTIKAKDRLGT 268

Query: 321 IV-----PHSK-----LTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEK 369
           I      P  +          A   P   + +  G    V  P +    R    +  +  
Sbjct: 269 IGRAEAPPAGEKKAGGDLIAVAYFPPADARRLPLGLPVEV-VPLWNQRGRFGGIEGTVRS 327

Query: 370 IDPIISQQDNNLQT-------------QEYYEVILKITDLAFSDNN-----------IEL 405
           +  + +  ++   T                    + +     SD+              +
Sbjct: 328 VLTLPATPEDISTTVGNTQLADALVKEGPVMRAEISLDRDPRSDDGYRWTLSGGSGVFPI 387

Query: 406 RNGFPAEVLFTAKNTTLAQEII 427
           R+G   +     +  +    I+
Sbjct: 388 RDGLTVDTFAYVEWRSPITYIL 409


>gi|296111367|ref|YP_003621749.1| lactococcin A ABC transporter permease protein [Leuconostoc kimchii
           IMSNU 11154]
 gi|295832899|gb|ADG40780.1| lactococcin A ABC transporter permease protein [Leuconostoc kimchii
           IMSNU 11154]
          Length = 449

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 67/428 (15%), Positives = 147/428 (34%), Gaps = 59/428 (13%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +     E+ V S+GEI  +  +  I+S   + +IK   +   + +  G  L+ +++ ET 
Sbjct: 39  AFFTHKEVVVKSTGEINPDKILATIQSTSNNAVIKNNLISK-NSVRHGDMLIQYQNSETD 97

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY-HSTCSKV 152
             + L+  +++NLR     EK+ L + N+          S ++ L   +  Y +S   + 
Sbjct: 98  TTLKLENANLQNLRAR---EKALLTYKNS---------LSEDKNLFSEIDAYGYSDAFQN 145

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +      +    + +L         +  L +  +     L+ +Q  L  ++N    N   
Sbjct: 146 YLSQSHMLANDYQQQLDGQNRATQQKDILTSSLNKKENNLNHYQSLLLAIQN--NTNLSP 203

Query: 213 QNDLNQQ--ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE--------- 261
           +N+  +   E     +TL   E+ + ++N +  + E  D+     ANY  +         
Sbjct: 204 ENNYYRMFSEYRNQTATLNTEESANIKRNTINTLKEQIDQLEDAIANYKTQYTTLPSENA 263

Query: 262 --------------------ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                               +++DL    +       +    + +     I+SP  GT+ 
Sbjct: 264 LSPNILPDKLSDLKSQQLSTVAKDLSAVTQEIKQIKIQHQATQDSYNNA-IVSPETGTVK 322

Query: 302 YNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
                + + Y  Q   + +I P         +   +   +I ++ KG           + 
Sbjct: 323 LLVDKTKTRYMPQGTNIAQIYPNLAEKPKLKVTFYINTSEITNISKGQLVRYMLSQNNNT 382

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +      +I  I  I +      Q   Y    +  T    +++   +  G    V     
Sbjct: 383 KST----LIGHISQIAAHPVTTKQGHFY---QVDATLNLKNNDYSTVHYGQEGTVSVITG 435

Query: 419 NTTLAQEI 426
            +T    +
Sbjct: 436 KSTWFVYL 443


>gi|70729909|ref|YP_259648.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
 gi|68344208|gb|AAY91814.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
          Length = 374

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 63/420 (15%), Positives = 125/420 (29%), Gaps = 86/420 (20%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           + L     +SL    +  +  +I L  W  L P   ++ S+   L    V  I    SG 
Sbjct: 30  RPLAVRIISSLGFAAIAIVGVLIVLYAWQ-LPPFSSAIESTENALVRGQVTIIGPQLSGY 88

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V++  Q+  G  L+  +D        + +  +      +  +K+AL     + + 
Sbjct: 89  VFEVPVQDFQQVKAGDLLVRLDD-------RIYQQRLDQSLAQLAVQKAALANALQQRNS 141

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E   + R+  L+D   +   + +                                    
Sbjct: 142 AEATIKLRQAALVDSQAQARKSAA------------------------------------ 165

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                      DL   + L    +VS+ +L                ++    N       
Sbjct: 166 -----------DLQRNEALIADGSVSRREL----------------DVTRAANAQTVAAV 198

Query: 247 LYDEANLEFA-NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              +A LE A   L+ +  +    +   A   + + +         IL+P  G +     
Sbjct: 199 AQAQAQLEIARQDLQTVIVNRGSLEAAVASAEAAVELARIDLSNTRILAPRDGQLGQIGV 258

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                Y      LM +VP     ++ A +   Q+ +V+ G   +         +   F  
Sbjct: 259 R-LGAYVNSGAQLMALVP--NQLWVIANMKETQMDNVRVGQPVSFTVDALNHRK---FTG 312

Query: 366 IIEKIDPIISQQ----DNNLQTQEYY----EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +++I P    +      +  T  +      V ++IT          LR G    V    
Sbjct: 313 KVQRISPATGSEFALLQADNATGNFVKIAQRVPVRITVDPDQPELERLRPGLSVVVSIDT 372


>gi|94970122|ref|YP_592170.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
 gi|94552172|gb|ABF42096.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
          Length = 410

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 46/417 (11%), Positives = 115/417 (27%), Gaps = 48/417 (11%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +RN  A    + +L  + +  +  W      E +  +      + ++  I S  SG +  
Sbjct: 36  QRNPAARWIFLLVLIALIVGAVFVWRYYTVRESTDDAQ----IDGHLTPISSRVSGTVVT 91

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V +   +  G  ++  +  +    +   K  + +     +  ++++            
Sbjct: 92  LNVTDNQVVNAGDLIVQLDPKDYEVALSRVKADLGDAIATAEGARTSVPITTI------- 144

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                                        S   SL      + +   +      +    +
Sbjct: 145 -----------------------------STGGSLDTAKANLAASKKDVDAASARVVEAQ 175

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A      KDL   K L +K+ +S+   +        +   +     +      H+ +   
Sbjct: 176 ANYDKLSKDLERAKMLVQKDEISRQQYDSAVAAEQAAKATVDAAQAQFAASQSHVAQAQA 235

Query: 250 EANLEFANYLKEI--SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
           +         + +     +   +     + + +   +       + +P  G I  N++  
Sbjct: 236 QLQTAGTAPQQVLVSRSRVGSAEAQVQRQQAAVNQAQLNLGYTAVRAPANGII-SNRTVE 294

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                   QPL  ++      ++ A     Q++ +K G    +    +    +    +  
Sbjct: 295 VGQTVSPGQPLAALIDLDD-VWVTANFKEDQLKKMKIGQKVKIHVDAFDKDFDGHLDSFA 353

Query: 368 EKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                  S       T  Y +V+    +KI      D    LR G          + 
Sbjct: 354 GASGARFSLLPPENATGNYVKVVQRLPVKIVFEKGQDPQHMLRPGLSVVPTVLTDSK 410


>gi|327313774|ref|YP_004329211.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella denticola F0289]
 gi|326946065|gb|AEA21950.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella denticola F0289]
          Length = 344

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 96/263 (36%), Gaps = 12/263 (4%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + + L       +T +         +  + +       +    RLDL  + + +R  +++
Sbjct: 72  DARQLVLKRDQLATNNDQLRATHGQLEANRRQLAANREATASRRLDLARQVASIRQQIAN 131

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q++      L    AV++  ++  +  +      L++ +   +  +   N    E +  
Sbjct: 132 QQRERQRFAELLRDGAVARKQVDDIDYQIQV----LQKQLAATEEQIASQNASLAEQDKG 187

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A  ++ I+          A   S+   ++       + SPI GT++  +      +   
Sbjct: 188 IAAQMEGINAQQAGVNAQQAGIRSQRAQIDDQIAHTFVKSPITGTVLE-KYAECGEFVPV 246

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            +PL K+   +   +IRA +T  Q++ V+ G    V    Y D + K +  ++  I    
Sbjct: 247 GKPLFKMA-DTGRMFIRAYLTSGQLKRVRIGQRVKVM-ADYGDGQRKTYDGVVAWISSRS 304

Query: 375 SQQ-----DNNLQTQEYYEVILK 392
                    ++ +    Y V ++
Sbjct: 305 EFTPKTILTDDERADLVYAVKVQ 327


>gi|306841078|ref|ZP_07473800.1| HlyD family secretion protein [Brucella sp. BO2]
 gi|306288888|gb|EFM60193.1| HlyD family secretion protein [Brucella sp. BO2]
          Length = 405

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 91/289 (31%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 129 IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQN 188

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++  +L     +  +   +I  L          
Sbjct: 189 TMARVQKLHETRFVAQSELDNAQSALDQARAKLAGADAQIASAKANIAVL---------- 238

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                    ++   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 239 -----EAQYKEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 292

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P     
Sbjct: 293 IAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAV 348

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++IT    +  + ++R G    V    +
Sbjct: 349 FSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDTR 397



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/257 (11%), Positives = 64/257 (24%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    QI  G  +   +  +    +D     +       +
Sbjct: 97  VQGDIASIAPKVTGYIENIPVVANQQIKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 156

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 157 RIQAQTDAAKAALLQANADQQAAKAVLLNAQNTMARVQKLHETRFVAQSELDNAQSALDQ 216

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              ++          +   ++L A           ++ L    A                
Sbjct: 217 ARAKLAGADAQIASAKANIAVLEAQYKEAASSTKSLE-LARDKAARDLSFTSLRAPFDGV 275

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +     + I  L     L      KE      +   T    +  +   +  
Sbjct: 276 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETQLAHIKVGETAHIYVDAIDGTKFD 335

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 336 GKVASI-APASGAVFSL 351


>gi|157373593|ref|YP_001472193.1| secretion protein HlyD family protein [Shewanella sediminis
           HAW-EB3]
 gi|157315967|gb|ABV35065.1| secretion protein HlyD family protein [Shewanella sediminis
           HAW-EB3]
          Length = 352

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 94/300 (31%), Gaps = 27/300 (9%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D+ +    +  + L       +          + S    L+    ++   +      +  
Sbjct: 58  DITDNQHVNAGQLLAQLEDNQYEAKLAQSQAELDSSQAELQTLSAKVELQHALIAQAQAG 117

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +   +     ++ L   K L EKN  SQ+D++Q +     S   L E         R +
Sbjct: 118 VAAAGSDRLRSEQQLRRSKKLKEKNYSSQDDVDQMQASFESSVAHLDEANAALVAKQREL 177

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                             +  L Q         + L + +       + +P +G I   +
Sbjct: 178 AV---------------FNAQLLQADANVVKAKAGLELAKIQLADTQVRAPFSGVI-GKR 221

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y Q  Q L  +VP     +I A     QIQH++ G +  V    + D   K F 
Sbjct: 222 GALKGQYVQPGQALYSLVP-DGAVWITANFKETQIQHMQPGQSVQVNLDAFPD---KTFT 277

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTA 417
            +I+ + P    +         T  + +++ +I     L   +    L  G  A V    
Sbjct: 278 GVIDSLSPASGAKFSLLPAENATGNFTKIVQRIPVRIRLELGEERERLVPGLSAIVKVDT 337


>gi|118591064|ref|ZP_01548463.1| putative multidrug efflux system protein [Stappia aggregata IAM
           12614]
 gi|118436140|gb|EAV42782.1| putative multidrug efflux system protein [Stappia aggregata IAM
           12614]
          Length = 444

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 89/289 (30%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL      +    +     I S   ++    T++ +   +    E   +   A       
Sbjct: 162 LLKIDDGDYKLAVQSAKDSIDSARATVNRIATQITAAKASVQQAEASVAAATAKKDEASA 221

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +    K L +    SQ  L+  +  +  +  +L            +I+ L  +       
Sbjct: 222 NFDRQKKLADNKFASQATLDTADAALKGAQADLENAQAAVTLAKANIDVLNGQQK----- 276

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                     + ++      + L   E+      I +P+ G IV N++    +  Q    
Sbjct: 277 ----------EAEQAVVAAKTALEKAERDLAFTVIRAPVDG-IVGNRAAQVGSLLQPGSR 325

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  IVP +   +I A     Q++ ++ G    +    Y D      +  +E I P     
Sbjct: 326 IAAIVPLADT-HIDANFKETQLEGIQPGAEVEISVDAYPDQ---PIRGTVESIAPATGSV 381

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                ++      T+    V +KI        +  LR G    V    +
Sbjct: 382 FSLLPAENATGNFTKVVQRVPVKIKVPEEEITSGHLRAGMSVVVAVDTR 430



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 113/351 (32%), Gaps = 44/351 (12%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDN-------VVEIKSPFSGIIKKFQV 72
           + LL+ +G  G   +             G  +   +       +  I S  SG +    V
Sbjct: 99  LILLAGLGFGGYEAYHWWTE--------GRFIASTDDAYVTADITVILSKVSGYVASVAV 150

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            +  ++  G  LL  +D +    +   K SI + R  ++   + +     K  V +    
Sbjct: 151 GDNQRVKAGDVLLKIDDGDYKLAVQSAKDSIDSARATVNRIATQIT--AAKASVQQAEAS 208

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
                        +    K       +   +L      ++    +  + +   +L +A +
Sbjct: 209 VAAATAKKDEASANFDRQKKLADNKFASQATLDTADAALKGAQADLENAQAAVTLAKANI 268

Query: 193 SSHQKDLTMMKNLFEKNAV-SQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYD 249
                 L   +   E+  V ++  L + ER +  + +   +   +  +   +  + +   
Sbjct: 269 DV----LNGQQKEAEQAVVAAKTALEKAERDLAFTVIRAPVDGIVGNRAAQVGSLLQPGS 324

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL------SPIAGTIVYN 303
                       I  + ++ Q       +++ I       + I       +P  G++   
Sbjct: 325 RIAAIVPLADTHIDANFKETQLEGIQPGAEVEISVDAYPDQPIRGTVESIAPATGSVFSL 384

Query: 304 --QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI--QHVKKGYTATV 350
                ++ N+      +++ VP      ++ KV  ++I   H++ G +  V
Sbjct: 385 LPAENATGNF----TKVVQRVP------VKIKVPEEEITSGHLRAGMSVVV 425


>gi|310643797|ref|YP_003948555.1| protein [Paenibacillus polymyxa SC2]
 gi|309248747|gb|ADO58314.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
          Length = 445

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 61/405 (15%), Positives = 118/405 (29%), Gaps = 69/405 (17%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +   +V+   Q+ +G  L+T + ++    I+  K  I      I   K  L   + K
Sbjct: 54  GGKVNTIEVKEEQQVKKGDVLMTLDPVDLDLQIEKLKTDIAQADVKIKQAKDGLQNQSEK 113

Query: 124 YDVLEK--AFESREEQLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRL 179
               EK    + +  Q  + L    +    +      I +  +SL   LT + +   N  
Sbjct: 114 ISTSEKQGQLDIQAAQAGESLLNQGTRAEDILRQKLAIEAAQQSLDAALTGVETAKRNAE 173

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL--------- 230
             +   S  +  L     +   +K L++  A ++ +L+  +  +  + + L         
Sbjct: 174 IAQKTVSSRQHALDLANVNYNRIKALYDAGAGTKAELDNAKNQLDNAQIALDTAKDQVEI 233

Query: 231 ------------------------------RENIHEQKNMLRHINELYDEANLEFANYLK 260
                                              E++   R   E   EA  + +   K
Sbjct: 234 AKNQIIAASKQSDIAKNGIAQQQTALDKMEAGATAEERQQARIKTEKAKEALTQTSQTRK 293

Query: 261 EISR-----DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           ++       DL   Q+       +L  LE  R +  + +   G +               
Sbjct: 294 DVKNSEYNVDLLAQQKQALSV--QLKTLELQRGRMVLKASTDGKVSRI-VPKMGEIVSTG 350

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--- 372
                I   +   Y    V    I   K G   T           K  +  +  I     
Sbjct: 351 ATGAVI--ETNQLYYDIYVGEDSISQFKAGGNVTSHVVALD----KDVQGKVRYITSAPQ 404

Query: 373 ---IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
              +   +D  L     ++V + +   +      EL  G   EV+
Sbjct: 405 YTNMRMSRDKGLSDISSFQVRVDVQRTS------ELLPGMTVEVV 443


>gi|159028738|emb|CAO88210.1| devB [Microcystis aeruginosa PCC 7806]
          Length = 434

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/350 (13%), Positives = 123/350 (35%), Gaps = 47/350 (13%)

Query: 42  ISVSSSGEILNEDNVVEIKS---PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +V++ G +      ++I +        + K  V+ G Q+  G  L   +        D 
Sbjct: 55  KAVAALGYVEPAGETIKISAAAFMEGSRLDKLLVKQGEQVDAGQVLAILD------SRDR 108

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            + ++K  +  +   +S L  +            +++  ++    ++  T S+     I+
Sbjct: 109 LQAALKQAQDQVRIAQSLLTQVKAG---------AKQGDIIAQNARFEGTRSE-LEGQIT 158

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +   ++     +++   + +         ++A   + QKD      L+E+ AVS+ + ++
Sbjct: 159 TQRATIASLTAQLQGEKMAQY---ATIERIKAEFHNAQKDCQRYHTLYEEGAVSEQERDR 215

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN--------- 269
              +   S   LRE       ++  +    DEA       +  + + +++N         
Sbjct: 216 FCLMAQTSQESLREANANLSRIVTTLTARIDEAKANLQRTVATLDQKIKENQATLDAVAE 275

Query: 270 ---------QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                    Q       S +   +   +   + +P AG I   + ++        + ++ 
Sbjct: 276 VRPVDVEVAQSQLIAAKSAVQKAKADLDLAFVKAPKAGQI--LKIYTWPGELIGDKGILD 333

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +   +   Y+ ++V    +  VK G  A +      D    + +  + +I
Sbjct: 334 LG-QTSQMYVTSEVYETDVSRVKLGQRAKIT----TDGLIGELRGTVAEI 378


>gi|85706603|ref|ZP_01037696.1| Secretion protein, HlyD family protein [Roseovarius sp. 217]
 gi|85669015|gb|EAQ23883.1| Secretion protein, HlyD family protein [Roseovarius sp. 217]
          Length = 386

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 56/415 (13%), Positives = 122/415 (29%), Gaps = 63/415 (15%)

Query: 11  RNHPASLKRMTLL---SIIGIIGLITWSI----LLPIEISVSSSGEILNEDNVVEIKSPF 63
           R+ P    R+       I  +I +  W      +        +   I     VV + S  
Sbjct: 21  RHSPPRRSRIRWARLTVIGAVIAVAVWLAAPWAIARFTTVHINDARI--AARVVTVSSEV 78

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           +G +    V  G  + +       +D+      +  +  +  +   +    + L  L  +
Sbjct: 79  AGRVTAIPVLLGDFVKK-------DDLIAAINRESSQTQLDAVLSKLAATDAQLSELQAR 131

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +L+K   +R +  L  +    +                                  E 
Sbjct: 132 KVLLDKQLSARRDAALAGIAAAEANH--------------------------------EA 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             ++L    + HQ+ +     L E+N  SQ  L++    +  +  + R      ++    
Sbjct: 160 SLAVLTNARTRHQRAI----KLAEQNITSQQALDEARAALDTAAQQERAAFAAIESARAS 215

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +     EA+ E  N L+     +       +   +   I E     + + +   G IV  
Sbjct: 216 L--AIVEADAEQLNVLE---SQIASLLAERSGTEADRRIKEIDLSHRQVTARFDG-IVDA 269

Query: 304 QSFSSSNYAQQSQPL-MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE-K 361
                  Y      + M   P     +I A V   +   +  G  A++    +       
Sbjct: 270 TFVDVGEYVTPGTRIAMYHAPDD--VWIDANVKETEFGRIHVGSRASITVDAFPGRTFEG 327

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLF 415
           K   +       ++   +   +  + +V  ++   +    +   LR G   EV  
Sbjct: 328 KVIGMGGAATSELALLPSPNPSGNFTKVTQRLPIRVVIDTDGSMLRPGMMVEVYV 382


>gi|258509380|ref|YP_003172131.1| bacteriocin ABC transporter permease [Lactobacillus rhamnosus GG]
 gi|257149307|emb|CAR88280.1| ABC transporter, bacteriocin transporter permease protein
           [Lactobacillus rhamnosus GG]
 gi|259650659|dbj|BAI42821.1| putative transporter protein [Lactobacillus rhamnosus GG]
          Length = 459

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/380 (12%), Positives = 112/380 (29%), Gaps = 33/380 (8%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G ++ +G  LL + D+     I L K  +  L+            +    D+  KA  
Sbjct: 77  KEGKRVKKGETLLVYHDVANPTQIKLLKQQLATLKEQQQQLDVLKQSVTENKDLFSKADR 136

Query: 133 -SREEQLLDFLGKYHSTCSKVFNYGISS-------------VYRSLKMKLTRMRSIYLNR 178
              ++Q+ D+L +             +              +  S++    +M +I   +
Sbjct: 137 FGYQQQVQDYLSQRRVLTLTAEAEQATQTVASEKNKEIDRLLSASIQTSQAKMAAISGAK 196

Query: 179 LDLENKSSL----------LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             ++    L           +        D     NL  +          +E+    S  
Sbjct: 197 AAIQANKPLPSRHAYHYFYQQYESEIKNTDAEAQANLKRQYLAQLQTQLDEEQTNLTSLE 256

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           + R    +     +   E         +   +    +  + Q+    + +KL  L    +
Sbjct: 257 QQRAGQKQADVSAQKAGETQANLTALQSRLQQTAVAEQTKVQQQIQADEAKLATLNDETQ 316

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKG 345
              + +  +G +    + + + Y      L +I+P         I+  V P +I  +K+G
Sbjct: 317 NYHVKASASGVLHLETALAGNQYVPSGSVLARILPDLTEQTAADIKLGVLPTEIMSIKRG 376

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
               +R     ++       +  ++  I      + +   ++ V  ++           L
Sbjct: 377 QKVRLRIA--ENVPTPTI--LDGRVYAIDVAPTRDPKVGNFFTVKARV--KLSKSQRQSL 430

Query: 406 RNGFPAEVLFTAKNTTLAQE 425
             G   +        T    
Sbjct: 431 YYGLAGQASVITGTKTYWDY 450


>gi|209552326|ref|YP_002284241.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209539438|gb|ACI59370.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 394

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 55/421 (13%), Positives = 116/421 (27%), Gaps = 88/421 (20%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL-------NEDNVVEIKSPFS 64
           + P   +R     ++G   ++  +       +  + G           + +   +    S
Sbjct: 42  SEPPVRRRAGRGLLVGATAIVLIAATAYYGHTYWTVGRFEIATDDAYVKADNSTVAPKVS 101

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V +   +  G PL   +D +                      ++ALD      
Sbjct: 102 GYIADVLVSDNQMVKAGQPLARIDDRDF---------------------RAALDQAKADV 140

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E    +++  L        +  + V     +  +     K                 
Sbjct: 141 AAAEATVNAKQASLDIQQSTIAAARATVDVDKANETFAEQNNKRYA-------------- 186

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                              NL            Q    +  +   +  +       ++ +
Sbjct: 187 -------------------NLATSGYAPVQTAQQAASAIAAAQATIIRDSAALDAAVKQV 227

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           + L               + +L Q +   A   +     E      TI +P+ G++  N+
Sbjct: 228 DLL---------------NAELAQAKAALARSQAVQQQAELNLSYATIAAPVDGSV-GNR 271

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     Y Q    LM +VP S +  I A     Q+  V+ G    +    +     +   
Sbjct: 272 TLRVGQYVQAGTQLMSVVPTSAVYVI-ANYKETQLTDVRAGQPVDIEVDTFPGRTYR--- 327

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTA 417
             ++ + P   Q+      +  T  + +V+ +I      D    N +LR G   +     
Sbjct: 328 GHVDSLAPASGQEFALLPPDNATGNFTKVVQRIPVKIVLDGQAANGDLRPGMSVQPSIDT 387

Query: 418 K 418
           K
Sbjct: 388 K 388


>gi|260553961|ref|ZP_05826227.1| multidrug resistance efflux pump [Acinetobacter sp. RUH2624]
 gi|260404915|gb|EEW98419.1| multidrug resistance efflux pump [Acinetobacter sp. RUH2624]
          Length = 361

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 62/428 (14%), Positives = 128/428 (29%), Gaps = 90/428 (21%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGL--ITWS---ILLPIEISVSSSGEILNEDNVV 57
           H M ++ K      LK+  ++ I  II L  I W    I LP  +  +    +  E +  
Sbjct: 9   HSMTESPKLTKMQYLKKHWVMVIAFIIVLVSILWILKVIFLPSSVVKTDDARVDVEYS-- 66

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I    SG I++  +++   + +G  L                         ID      
Sbjct: 67  TIAPKVSGNIEEIYIKDHQTVKKGQLL-----------------------ARIDAR---- 99

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                            +  L +    Y    + +    ++   +   ++          
Sbjct: 100 ---------------DYQAALAEAESNYAKAQADLNEAKLAVERQPTVIR---------- 134

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             + E +   + A +   + +    + L    A S+    Q +  + +   +L  +  + 
Sbjct: 135 --ETEAQLRKVEAGIKLTKDNTARYEQLQALGAESRLITQQSKTTLTEQYADLDSSKEKV 192

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +    +N+   +   +               +       + L   +       I SPI 
Sbjct: 193 TDAQYQLNQYKIQVQAK---------------EAALKQAQAALDKAKLNLSYTEIRSPID 237

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I   +S +  N+     PLM +VP     Y+ A     +++ +K G    V    Y  
Sbjct: 238 GMI-GQKSANVGNFVGAGNPLMVVVPLD-QVYVEANFREIELKQIKIGQPVIVYVDAYN- 294

Query: 358 IREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIE----LRNGF 409
               + K +++   P      S       T  + +++ ++        N      LR G 
Sbjct: 295 ---VELKGVVDSFSPSTGAFFSPISATNATGNFTKIVQRLPLRIKLLENQPDIKLLRPGL 351

Query: 410 PAEVLFTA 417
              V    
Sbjct: 352 SVVVSVDT 359


>gi|91977872|ref|YP_570531.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5]
 gi|91684328|gb|ABE40630.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5]
          Length = 419

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 89/278 (32%), Gaps = 32/278 (11%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 I++   +++    ++ ++       + +     A       D    + L  K  
Sbjct: 161 DAARAKIATQQATIERIGRQVSALQSAVEQAQAQRDSAEAAAKRAALDFDRQQALSTKGF 220

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQN 269
            S+                    + +        +    +A  + A    E++     + 
Sbjct: 221 ASRATF----------------EVSQAGRDQGVASVAAAKAAFDAARDNVEVTKAQQNEA 264

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +    +  S L   E+  +   + +P+ G +  N+  ++ ++ Q  Q L  IVP     Y
Sbjct: 265 RAQLVELQSSLAKAERDLDFTNVRAPVEG-VFSNRLVNTGDFIQAGQRLANIVPLDG-VY 322

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQE 385
           + A     Q+  +K G    +    Y+  +    +  ++ + P   Q       +  T  
Sbjct: 323 VDANFKETQLGRLKPGQKVDISVDAYSSRK---IEGTVDSLAPAAGQVFTLLPPDNATGN 379

Query: 386 YYEVILKIT-----DLAFSDNNIELRNGFPAEVLFTAK 418
           + +++ ++          +  N+ LR G    V    K
Sbjct: 380 FTKIVQRVPVRIRVPAEVARENL-LRAGMSVYVRVDTK 416


>gi|325141728|gb|EGC64183.1| leukotoxin secretion protein D [Neisseria meningitidis 961-5945]
          Length = 191

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 52/139 (37%), Gaps = 3/139 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  +        P    R  +   +     + WS    I+I  ++SG+ ++      I+ 
Sbjct: 43  HLELTDTPVSAAPKWAARFIMAFALL---ALLWSWFGKIDIVAAASGKTVSGGRSKTIQP 99

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             + ++K   V +G  + QG  L   E + T   +   + +++  +      ++ L  L 
Sbjct: 100 LETAVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALE 159

Query: 122 NKYDVLEKAFESREEQLLD 140
           ++        ++R   L D
Sbjct: 160 SRTVPHIDMAQARSLGLSD 178


>gi|304397155|ref|ZP_07379034.1| secretion protein HlyD family protein [Pantoea sp. aB]
 gi|304355304|gb|EFM19672.1| secretion protein HlyD family protein [Pantoea sp. aB]
          Length = 364

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 85/279 (30%), Gaps = 32/279 (11%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +++   +      L MK   +++    R   E      +A L + +          +   
Sbjct: 96  RIYRQRVHQAQAQLAMKQAALKNNLQQRRSAEATIQSNKAALENAKAQA------LKSGF 149

Query: 211 VSQNDLNQQERIVYKSTLELREN--IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
               DL + E +    +L +RE           +                L+ +  + + 
Sbjct: 150 ----DLKRVENLAADGSLSVRERDAARAANAQAQAQVRQAAAQIAVAQQNLQTVIVNRDA 205

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +       + L + E       I +P  G +      +   Y      L  +VP+ K  
Sbjct: 206 LEGDVESARAALELAEIDLANTRITAPDDGQLGQLSVRT-GAYVTAGTRLTSVVPNHKWI 264

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
              A +   Q+ H++ G   T+R         K+F   +E I P    +      +  T 
Sbjct: 265 I--ANLKETQLAHIRPGLPVTIRVDALD---GKRFNGQVEFISPAAGSEFSAISPDNATG 319

Query: 385 EYYE------VILKITDLAFSDNNIELRNGFPAEVLFTA 417
            + +      V ++I +         LR G   EV    
Sbjct: 320 NFVKIAQRIPVRIRINEQDMQQ----LRPGMSVEVDIDT 354



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 69/208 (33%), Gaps = 21/208 (10%)

Query: 16  SLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           S+   + + +IG++ ++  W +  P   ++ S+        V  I    +G +   +V +
Sbjct: 22  SIAAGSGIVVIGVLVILYAWQLW-PFTSAIQSTENAYVRGQVTFISPQVNGYLTSVKVID 80

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-------------------DTEKS 115
              + +G  L+T +D      +   +  +   +  +                     E +
Sbjct: 81  LQPVKKGQLLMTIDDRIYRQRVHQAQAQLAMKQAALKNNLQQRRSAEATIQSNKAALENA 140

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
               L + +D+      + +  L           +      +      + +    ++++ 
Sbjct: 141 KAQALKSGFDLKRVENLAADGSLSVRERDAARAANAQAQAQVRQAAAQIAVAQQNLQTVI 200

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +NR  LE      RA L   + DL   +
Sbjct: 201 VNRDALEGDVESARAALELAEIDLANTR 228


>gi|149186604|ref|ZP_01864916.1| putative hlyD family multidrug secretion protein [Erythrobacter sp.
           SD-21]
 gi|148829831|gb|EDL48270.1| putative hlyD family multidrug secretion protein [Erythrobacter sp.
           SD-21]
          Length = 382

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 83/301 (27%), Gaps = 28/301 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E    +  + L+    + +   +      I++          + +           + 
Sbjct: 87  VTENQTVASGDALVQLDVRDYRAQTNQVEAQIAASLAGADTVRAQQQEQDAAIAQARAQL 146

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +   A      + +   + L    A  +  L+Q                  Q    +   
Sbjct: 147 AAASAQAGLAAEQVVRYRPLAASGAEPRERLDQL---------------EAQAREAQAQV 191

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                A          +S  ++Q         ++L          T+ + I+G +     
Sbjct: 192 AAARAALTAAQRRQNTLSEQIDQANSQANAARAQLEAARLNLASTTLQASISGRVGDLTV 251

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                + Q  Q LM +VP     Y+ A     Q+  V+ G   T+      D+   +   
Sbjct: 252 R-PGQFVQPGQRLMSLVPTD-RLYVTANFKETQLGLVRPGQPVTLEIDALPDL---ELLG 306

Query: 366 IIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +E I P        +  Q      T+    V ++I+  A  +    L  G         
Sbjct: 307 RVESIAPGTGAEFSILPPQNATGNFTKIVQRVPVRISIQASPEILRLLVPGMSVVASVDT 366

Query: 418 K 418
           +
Sbjct: 367 R 367


>gi|332663249|ref|YP_004446037.1| RND family efflux transporter MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332332063|gb|AEE49164.1| efflux transporter, RND family, MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 474

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 77/280 (27%), Gaps = 38/280 (13%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             V+   +     SL     +  +          +   + A L + ++     + LF+  
Sbjct: 96  PDVYQSQVEQGMASLNQAKAQEANARAQIESQRGQREQILANLENAREIHKRNEKLFKSG 155

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +S+ D       +      ++ +    K+     N                        
Sbjct: 156 VISEADYQASLSNMRALEANVKGSEASIKSAQESANG----------------------A 193

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHS 325
           + +     + L  L  + ++ TI SP  G +                     +M+I   +
Sbjct: 194 RFSIQSSEATLKQLRTSLKRTTIYSPTNGIVSMLNVEKGERVVGTIQMAGTEMMRIANLN 253

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNNLQ 382
               +R  V+   I  VK G    V    Y     +KF   + +I       +       
Sbjct: 254 N-MEVRVDVSENDIPRVKLGDLVDVEVDAY---IGRKFVGRVTEIANSSSNSATAALTSD 309

Query: 383 TQEYYEVILKITDLAFSD-----NNIELRNGFPAEVLFTA 417
               +EV + I   ++ D          R G  A V    
Sbjct: 310 QITNFEVRIGIDPSSYKDLIEPRKRYPFRPGMSASVEINT 349



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 71/197 (36%), Gaps = 11/197 (5%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    I+  V++SG++  +  V  I S  SG I +  ++ G  +  G  L   +      
Sbjct: 43  ADFRTIKEVVAASGKVFPQTEVK-ISSDVSGEIVELFIKEGDSVRIGQVLARIDPDVYQS 101

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            ++    S+   +      ++ ++    + + +    E+  E        + S    +  
Sbjct: 102 QVEQGMASLNQAKAQEANARAQIESQRGQREQILANLENAREIHKRNEKLFKSGV--ISE 159

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK------ 208
               +   +++     ++    +    +  ++  R  + S +  L  ++   ++      
Sbjct: 160 ADYQASLSNMRALEANVKGSEASIKSAQESANGARFSIQSSEATLKQLRTSLKRTTIYSP 219

Query: 209 --NAVSQNDLNQQERIV 223
               VS  ++ + ER+V
Sbjct: 220 TNGIVSMLNVEKGERVV 236


>gi|56750165|ref|YP_170866.1| hypothetical protein syc0156_d [Synechococcus elongatus PCC 6301]
 gi|56685124|dbj|BAD78346.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 411

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 119/345 (34%), Gaps = 50/345 (14%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +    V+ +++P  GI+  FQ+  G +I    PLL  E+  T+            L+  +
Sbjct: 57  IVNAKVITLQAPDDGIVTDFQIRPGEEIPANQPLLRIENPRTST------FEQARLQTQL 110

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           DTE+                           L       S +          +   +   
Sbjct: 111 DTEQQK-------------------------LKLQQDQLSNISQLRQQVERDNRNQRQLE 145

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV-------SQNDLNQQERIV 223
           +      R  L+   +  R  L+  ++     ++L    A+       ++ D  +Q+  +
Sbjct: 146 INKFTAQRRKLQADINAARGQLALAKRIYERRRDLATTGAIAIEVADQAETDYLRQQDAL 205

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              T EL     + K     +  +    N + +  L+E+     Q +   A + +++  L
Sbjct: 206 TALTKELTSREQDLKAAQLGLTLINSRTNYDPSVRLQELKIQETQLRSQVAAQTAQVNGL 265

Query: 284 EKTREQKT----------ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           +   ++ T          + SP+  T+++  S S+ +   + QPL K +   +  +I   
Sbjct: 266 KNQLQEITRNTRSRQNIPLSSPV-PTVLWQSSVSNGDVVTRGQPLAKTI-DCRDRWIDVY 323

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +    ++ V+ G +A +           K   I   +  +   +D
Sbjct: 324 IGETALRQVRIGESARIDLIGKDQSITGKVAFIRSGVGRLRIGED 368


>gi|293568401|ref|ZP_06679722.1| EntD [Enterococcus faecium E1071]
 gi|291588922|gb|EFF20749.1| EntD [Enterococcus faecium E1071]
          Length = 477

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/441 (9%), Positives = 145/441 (32%), Gaps = 37/441 (8%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           + H +  + +    I+ +  +  +      ++ + ++ ++  E  + +++ P    I + 
Sbjct: 37  KQHHSFYRWVLYPVILFLCIIGLFLTFAKKKVVIRTTAQLNPE-KIEKLQVPLEAKIMEN 95

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL---------- 120
            ++    + +   L+  +     +     +   + +   I   +  ++ +          
Sbjct: 96  FLKENQFVHKDDVLVRLDCSLIENEKAQIEQENQRITQQIKMAQLFIESISKGKNLFSTD 155

Query: 121 -NNKYDVLEKAFESREEQLLDFLGKYH---STCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            +  Y    K+  S +E L   L +         +V+      + + ++   ++++    
Sbjct: 156 DSFGYSNQLKSMLSEKESLRYALKQSELNDQKQLEVYEKTKRQLEKQIESSDSKLQEWQQ 215

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL-NQQERIVYKSTLELRENIH 235
            ++   N  SL               + L   +   +N +       + +   +L++ + 
Sbjct: 216 VQVAWSNNQSLKDFSKEMMANYENWQEQLNNVSDDQKNQVKLTISASINEQIEQLKKEVE 275

Query: 236 EQKNMLRHI---NELYDEANLEFANYLKEISRDLEQNQRTFADEMSK-------LTILEK 285
           + ++    +       ++   +     +E+ + +   ++T  +   K       +  L+ 
Sbjct: 276 QYQSEKAKLVKPTTSENDRISQTEKGKQELEQAITTVKQTVTELNEKQEKNQSVIKSLDD 335

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQHVK 343
              +  + +P++GT+  N+         +   L +I P          A +   +  ++K
Sbjct: 336 QLSKGILKAPVSGTVHLNEETKGQAELAKGTVLAEIYPIHEKSKMKFTALLPANESTYIK 395

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           +G     +       ++      I+     IS+     +   +Y V   +     +  + 
Sbjct: 396 EGMKVHFKLD-----QKGGAPITIDGTLDEISENSTATEKGVFYAVKGTL----KTTQSF 446

Query: 404 ELRNGFPAEVLFTAKNTTLAQ 424
             R G   E+       T  Q
Sbjct: 447 PFRYGLTGELSLIVGEKTYWQ 467


>gi|254248909|ref|ZP_04942229.1| Secretion protein HlyD [Burkholderia cenocepacia PC184]
 gi|124875410|gb|EAY65400.1| Secretion protein HlyD [Burkholderia cenocepacia PC184]
          Length = 364

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 50/371 (13%), Positives = 106/371 (28%), Gaps = 75/371 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    +G + K  V +  ++  G  L+  +  +           +      +D
Sbjct: 62  VGGDVTVLAPKVNGFVDKILVTDNQRVKAGDVLVQLDARDYDA-------KLAQASAEVD 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           + +SA+  L  K                                      + L+  +   
Sbjct: 115 SARSAVTELEAK--------------------------------------QQLQFAVIGQ 136

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +   N    E         L+    D    + L + +AVS   + + +    K+   + 
Sbjct: 137 HAADKNASSAE---------LTRAASDRVRYRELVKSDAVSNQIVERADADYSKAGAAVE 187

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   +      ++   +     E  T
Sbjct: 188 RSDAALLASKRQLDVL---------------GAQLADARARVNTALAAQRVAALNVEYTT 232

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +  N++      A    PL+ +VP S   +I A     Q++ ++ G    V 
Sbjct: 233 IRSPVDGYV-GNRTGRVGMLANVGAPLLTVVPASG-LWIDANFKEDQLRKMRAGDRVDVA 290

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN----IELRN 407
               +     +  ++        S       T  + +++ ++      D        LR 
Sbjct: 291 LDASSTRLHGRVDSLAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGIEHVLRP 350

Query: 408 GFPAEVLFTAK 418
           G  A V     
Sbjct: 351 GLSAVVTVHTD 361


>gi|190893496|ref|YP_001980038.1| protein secretion protein, HlyD family [Rhizobium etli CIAT 652]
 gi|190698775|gb|ACE92860.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CIAT 652]
          Length = 404

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 87/267 (32%), Gaps = 16/267 (5%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L     ++ +  L+   ++ +     A L+  Q     ++       ++Q   ++ +
Sbjct: 140 QNALDQAEAQIATEQLSLQRIDAQIEGANASLAQAQAQKVALEAAVRGAEITQKRQSELQ 199

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFADEMSK 279
                +  +L  +           N    +AN+  A     I     ++ + +       
Sbjct: 200 AKSVGTAADL--DNANIALDQAKANLAGGDANITAAQANITILQAQRKEAEGSVRALEIS 257

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                +      + +P  G IV N+S    +     Q LM +VP  +  YI A     QI
Sbjct: 258 RDKAARDLSFTVLKAPYDG-IVGNRSVQEGDLVSPGQRLMALVPVHE-LYIDANFKETQI 315

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVIL 391
           QH+  G    V    Y+D         +E I P           +      T+    V +
Sbjct: 316 QHLVAGSKVNVHVDAYSDH---PVVGTVESISPASGSVFSLLPPENATGNFTKVIQRVPV 372

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAK 418
           +I     + ++  LR G    V    +
Sbjct: 373 RIALPQDALDSGRLRAGLSVVVDVDTR 399



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/156 (10%), Positives = 48/156 (30%), Gaps = 5/156 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E ++  I    +G + K  V    ++  G  L T ++ +  + +D  +  I   +  +  
Sbjct: 100 EGDIATISPKVTGYVAKVNVVANQEVKAGDVLATLDNGDYQNALDQAEAQIATEQLSLQR 159

Query: 113 -----EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                E +       +   +      R  ++           S      + +   +L   
Sbjct: 160 IDAQIEGANASLAQAQAQKVALEAAVRGAEITQKRQSELQAKSVGTAADLDNANIALDQA 219

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +     N    +   ++L+A     +  +  ++
Sbjct: 220 KANLAGGDANITAAQANITILQAQRKEAEGSVRALE 255


>gi|294853141|ref|ZP_06793813.1| multidrug resistance protein A [Brucella sp. NVSL 07-0026]
 gi|294818796|gb|EFG35796.1| multidrug resistance protein A [Brucella sp. NVSL 07-0026]
          Length = 405

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 90/289 (31%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 129 IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 188

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++   L     +  +   +I+ L          
Sbjct: 189 TMARVQKLHETRFVAQSELDNAQSALDQARARLAGADAQIASAKANISVL---------- 238

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                     +   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 239 -----EAQYNEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 292

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P     
Sbjct: 293 IAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAV 348

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++IT    +  + ++R G    V    +
Sbjct: 349 FSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDTR 397



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 65/257 (25%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +   +  +    +D     +       +
Sbjct: 97  VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 156

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 157 RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSALDQ 216

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+          +   S+L A  +        ++ L    A                
Sbjct: 217 ARARLAGADAQIASAKANISVLEAQYNEAASSTKSLE-LARDKAARDLSFTSLRAPFDGV 275

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +     + I  L     L      KE      +   T    +  +   +  
Sbjct: 276 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETQLAHIKVGETAHIYVDAIDGTKFD 335

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 336 GKVASI-APASGAVFSL 351


>gi|158334984|ref|YP_001516156.1| membrane fusion protein [Acaryochloris marina MBIC11017]
 gi|158305225|gb|ABW26842.1| membrane fusion protein, putative [Acaryochloris marina MBIC11017]
          Length = 394

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 48/334 (14%), Positives = 105/334 (31%), Gaps = 52/334 (15%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLIDLKKVS 102
           +S+ G I     V+++  P    + +  V+ G Q+ +G  +   E   E    + L    
Sbjct: 55  ISALGRIEPAGQVLQVGGPTGERVLQLLVKEGQQLEKGETIAFLESYPERQAEVKLAASR 114

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   +     E+                                         G  +  R
Sbjct: 115 LLEAQNRFIAERELGKA-----------------------------------QGQEARTR 139

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
             + +  +MR I      ++      +      +  L   + L +  AVS+ +L+ +   
Sbjct: 140 RNQAETPKMREIAAQDALVKQS----KVEYEQAKITLKRYEFLQKAGAVSKQELDDRFLS 195

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                 +L   I     +   +    + A  +      ++     Q Q   A   S L +
Sbjct: 196 FRSKQQQLNNAIATLAMLQEELQTNSNNARAQIN--RTKVGTLRSQAQIDLASAKSNLEL 253

Query: 283 LEKTREQKTILSPIAGTIVYNQSF---SSSNYAQQSQPLMK-IVPHS--KLTYIRAKVTP 336
            +    +  I +P AG I+        +    +     + K IV     +  Y+ A+V  
Sbjct: 254 AKARMTRTIIRAPNAGQILKVHIRQGEAIPAVSTSGSEVQKGIVEMGNTRQMYVVAEVYE 313

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             I  ++ G  A +     + + + + +  ++KI
Sbjct: 314 TDINQIQIGQLAKIN----SPVIKGEIEGTVDKI 343


>gi|218439695|ref|YP_002378024.1| efflux transporter RND family, MFP subunit [Cyanothece sp. PCC
           7424]
 gi|218172423|gb|ACK71156.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           7424]
          Length = 475

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/344 (10%), Positives = 106/344 (30%), Gaps = 44/344 (12%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I K  VE G  +  G P+   E     + +     +++N     +  ++ L     + 
Sbjct: 75  GQIIKIFVEEGDAVNVGQPIAELEPTREEEQVFSAAANVQNRIAAFNQAEAELRQRQAER 134

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D  E      +  +      + S  ++V                  +  + L +++ +  
Sbjct: 135 DGAESEIARLKADVARAQSDFRSREAEVQRA---------------LGDLDLAQVNYKRA 179

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + L+   +   Q      +NL      ++ +L    ++   +   +       +  + ++
Sbjct: 180 AFLVNEGVQPTQDLDDNTRNLN----TAKANLESARKLRDSALASVEAAQGALQASINNL 235

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               +                ++Q +    +   +L  + +     T+ +PI G +    
Sbjct: 236 QAAEERIQA--------ARAVVDQAKAAIEEAQGQLGAINQDLVYNTMSAPITGVVGDFN 287

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                ++    +    I   +++  +   +  +    ++ G    +      +    + +
Sbjct: 288 EKKVGDFMNVGEEFTTIT-DNEVFLLNISIPTEFYNRLRIGLPVEI----LNNDGTPRIR 342

Query: 365 AIIEKIDP------------IISQQDNNLQTQEYYEVILKITDL 396
             +  + P            I  + D +L+  +Y  V +   + 
Sbjct: 343 GQVSFVAPRVRQDAQTVLTKITFRNDGSLRNNQYVRVRVIWDEK 386


>gi|75907455|ref|YP_321751.1| heterocyst specific ABC-transporter, membrane fusion protein DevB
           [Anabaena variabilis ATCC 29413]
 gi|75701180|gb|ABA20856.1| heterocyst specific ABC-transporter, membrane fusion protein DevB
           [Anabaena variabilis ATCC 29413]
          Length = 444

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/395 (11%), Positives = 122/395 (30%), Gaps = 62/395 (15%)

Query: 42  ISVSSSGEILNEDNVVEIKSP----FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            +V++ G +  +  V+++ +P        ++K  V+ G ++  G  +   ++        
Sbjct: 61  KTVTALGRLEPKGEVIKLSAPSSPGQGSRVEKLLVKEGDKVKAGQVIAILDN-RDRLEAA 119

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            ++         ++ EK        + +         + Q      +   T +++     
Sbjct: 120 YQEAQEAVKVAQVNLEKVREGAKVGEIEAQRAEIARVQAQTTGDEREQQETVARLEAQWQ 179

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ---- 213
                                   +     L A L + Q +    + L+   A+SQ    
Sbjct: 180 GEKSAQ------------------QATVKRLEAELKNAQSEWERYQKLYADGAISQSSYD 221

Query: 214 ----------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                       L++ +  + +     R+ I E K  L  IN    +     A  L +I+
Sbjct: 222 TKRLSVDTITQQLSEAQANLQRIDSTGRKQISEAKTALSRINTTGSKQVSAAAATLNKIA 281

Query: 264 R----DLEQNQRTFADEMSKLTILEKTREQKTIL--------SPIAGTIVYNQSFSSSNY 311
                D++  +      ++     +   +Q  +         SP  G I    + +    
Sbjct: 282 EVRPIDIQAAKVEVDRALAAAKQAKANLDQVYVRWPKDLAEPSPQDGVIFDIYTRA-GEV 340

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 +++I    ++  +  +V    +  V+ G    +     +     K +  +++I 
Sbjct: 341 VST-DGIVEIGRIDQMYAV-VEVYQSDVNKVRTGQKVEIS----SKSLPGKLRGTVDQIG 394

Query: 372 ------PIISQQDNNLQTQEYYEVILKITDLAFSD 400
                  II+   +        EV +++ + +   
Sbjct: 395 WKVQRQNIINSDPSENIDSRVVEVHVQLDEASSQK 429


>gi|17228304|ref|NP_484852.1| hypothetical protein all0809 [Nostoc sp. PCC 7120]
 gi|17130154|dbj|BAB72766.1| all0809 [Nostoc sp. PCC 7120]
          Length = 406

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 105/320 (32%), Gaps = 51/320 (15%)

Query: 42  ISVSSSGEILNEDNVVEIK---SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +V++ G I  +  V+++    S     +++  V+ G ++  G  +   +          
Sbjct: 60  KTVTALGRIEPKGKVIKLSATTSSEGSRVEQLLVKEGDRVKPGQLIAILDS--------- 110

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                                     D L+ A +  +EQ+       + T +      I+
Sbjct: 111 -------------------------RDRLKAALKEAQEQVKVAQANLNRTQAGAKGGEIA 145

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +   ++       R     +L      + L+A + +   +    + L+++ AVS ++ ++
Sbjct: 146 AQMATIAKLEAEGRGNIAAQL---ATVARLQAEVRNATAENQRYQTLYQQGAVSASEGDR 202

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           Q   +  +   L+E   + + +     +   +A    A   +    D+E  +      ++
Sbjct: 203 QRLNLETAQKTLQEAQADLQRIQTTSQQQLQQAKATLAQITEVRGVDVEAAKAEVNRAIA 262

Query: 279 KLTILEKTREQKTIL--------SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +   +   +Q  +         SP    +    +            ++ I   +   Y+
Sbjct: 263 AMNQAKVHLQQAYVRWPKELRGSSPQDAQVFEIHTH-PGELVST-DGIVDIG-QTNQMYV 319

Query: 331 RAKVTPKQIQHVKKGYTATV 350
            A+V    I  VK G    +
Sbjct: 320 VAEVYESDISRVKPGQKVRI 339


>gi|332877520|ref|ZP_08445267.1| hypothetical protein HMPREF9074_00998 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332684626|gb|EGJ57476.1| hypothetical protein HMPREF9074_00998 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 432

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 68/430 (15%), Positives = 145/430 (33%), Gaps = 30/430 (6%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS-- 64
           +++    P        L + G++G++     L I+   +  G+I        I+      
Sbjct: 17  RDIIDRMPTRWSGWIALVVGGLMGVVLLLGYL-IKYPDTVDGQISITGTHAPIRLLAGTN 75

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V N +++ +G  +   E+    D I   +         +  E   +D      
Sbjct: 76  GRI-HLMVSNQARVKEGDLIAYIENGADMDDIQTLE--------QLVGEDIRMDTELTLP 126

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LEN 183
             LE         L      +  +      Y  S +Y ++K  L +   +     D L+ 
Sbjct: 127 TGLELG------DLSSVYNSFLLSYRVYDQYRKSELYTNMKSTLLKQIDVDGKVADNLKR 180

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +  L+  ++++ ++ L     L  K  +S+ + + Q   +               + L  
Sbjct: 181 ELKLVGRIVANEREHLKKDSLLLLKGGISKLNYDDQHNALLAQEETEVGLQSSHLSKLSD 240

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           IN+   E +       + + +  E     + + M++L +    + +  +++P  G + Y 
Sbjct: 241 INKNKLEIDRLNIEESETLQKAYESVLVNYNELMNQLNV---WKIKYLLIAPEGGDLEYL 297

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             +  + + Q S+ L  I+P          +T      VK G  A V+   Y        
Sbjct: 298 GFWRENTHVQVSEELFTILPEKNEVIGEVYMTSVGAGKVKSGQEANVKLTDYPYDEYGLL 357

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL-----RNGFPAEVLFTAK 418
           K  ++ +  + +       T E Y V +   D   ++   +L       G    +    K
Sbjct: 358 KGRVQNVSQLTNTISTQNGTVETYLVTVTFPDGLRTNFGKQLSLNFETKG---SIEIITK 414

Query: 419 NTTLAQEIIH 428
              L Q +  
Sbjct: 415 PKRLIQRLFD 424


>gi|187934135|ref|YP_001887021.1| HylD family protein [Clostridium botulinum B str. Eklund 17B]
 gi|187722288|gb|ACD23509.1| efflux transporter, RND family, MFP subunit [Clostridium botulinum
           B str. Eklund 17B]
          Length = 482

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 57/391 (14%), Positives = 131/391 (33%), Gaps = 72/391 (18%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  S++  GE+   +N   + +    I+K+ +V+ G ++  G  L   +  +  + I+
Sbjct: 65  ANIVNSINVLGEVK-SENSTNVYTNSGNIVKEVKVKVGDEVKTGDVLAILDTEKLKEEIE 123

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
               ++                 N K D+                     +  + ++  +
Sbjct: 124 QLTETLSASEA------------NGKLDL--------------------DSKKRAYDNIV 151

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                +L   L          ++  +     +  L   ++     K +     +S  +  
Sbjct: 152 YINENNLNTDL----------INANSMLETAKITLEDAERLYQYNKTILGYGEISNQEFK 201

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E    K+  +  +   E +N    I E     +L+ A    E ++   +N+       
Sbjct: 202 KSENDYNKAKDDYNKANVELENSKLKIQE-----DLKNAQNSYESAKIAYENKSERVALE 256

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +K    +K  ++ TI + + GTI    + +  +    +  L KI        I+A +   
Sbjct: 257 NK----KKELDECTIKASVDGTITTVNA-TVGS--PSTGTLFKI-EDLNNLIIKASIKEV 308

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN--------NLQTQEYYEV 389
            I ++K G    ++     D+   +    I +I P     +                +E 
Sbjct: 309 DIANIKVGQKTMIKTDATDDL---ELLGEISEISPTAKVDEPIVPTGNSTANSGDVIFEA 365

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +KI ++   D NI++  G  A++    +  
Sbjct: 366 KVKINEM---DENIKI--GMKAKLNIILEEK 391


>gi|157149748|ref|YP_001451344.1| transport protein ComB [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|1698422|gb|AAB37565.1| ComB [Streptococcus gordonii]
 gi|157074542|gb|ABV09225.1| transport protein ComB [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 452

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 68/428 (15%), Positives = 151/428 (35%), Gaps = 29/428 (6%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + + S+I ++ L+ +S+L   EI++SS   +     + +I+S  +  I    +    ++ 
Sbjct: 23  LIVPSLILLVFLVGFSMLAKKEITISSRASVEASRVLAQIQSTSNQPIIANHLAENKEVK 82

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDV-----LEKAF 131
           +G  L+ +               +  L+     ++T +S+L+   N++        E++F
Sbjct: 83  KGELLIQYAVEGEGAQEQKFSSQLDLLKDQKGKLETLRSSLESGRNQFTEPDSYGYEQSF 142

Query: 132 ESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL-- 187
           +  + Q+       +   + +   N   S     L   ++ + S   +  +L+N      
Sbjct: 143 KDYQNQVESMTSSVNQQNATIASQNAAASQSQAELGGVISDVDSKLNDHRNLKNAIQSGV 202

Query: 188 ---LRALLSSHQKDLTMMKNLFEKNAVSQND----LNQQERIVYKSTLELRENIHEQKNM 240
                  L S  +      +L E  A +Q+     L+ Q   +  +    R         
Sbjct: 203 GIDASHPLHSLYQSYRDQLSLAEDKATAQSQIVAQLDGQISQLEATAATYRVQYAGAGAQ 262

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
             + + L  +     A YL ++ ++L    +   +  S L + E   ++  IL+ + G +
Sbjct: 263 QAYASNLSSQLASLKAQYLVKVGQELTTLTQQILEAESNLKLQETVSKRGQILAEMDGLL 322

Query: 301 VYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
             N     S    +   L +I P   + +   I   V+ K +  +K G            
Sbjct: 323 HLNPEVQGSTLVAEGTALAQIYPKITNERKIKIVTYVSSKDVSTIKNGDKVRF-ITADDA 381

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            ++    + I  ID   +Q     Q   +    ++       D   +LR G   + +   
Sbjct: 382 NKQMILTSQISSIDANATQ---TKQGNFF---KVECEMAVSKDQAKKLRYGLEGKFVMVT 435

Query: 418 KNTTLAQE 425
              T    
Sbjct: 436 GEKTYFSY 443


>gi|261364418|ref|ZP_05977301.1| HlyD family secretion protein [Neisseria mucosa ATCC 25996]
 gi|288567325|gb|EFC88885.1| HlyD family secretion protein [Neisseria mucosa ATCC 25996]
          Length = 384

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 22/261 (8%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +      L  + + L          + + K        ++  L++  R   +      + 
Sbjct: 130 VAQAEAGLAGQQAALNKTAQDKASAIAVSKANQAAIDNARAQLDRARREWQRIQAVSADA 189

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRD--------LEQNQRTFADEMSKLTILEK 285
           + +             EA L+ A     +++          E  Q   A+  + L + ++
Sbjct: 190 VSQSSRDAAQTAVKQAEAGLKQAQEQYAVAQQNIINTGVGREGAQAGIANAQALLDLAKQ 249

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 I +P +G  +   S            LM +VP  +     A +    + +VK G
Sbjct: 250 DLGHTVIYAPASGK-LGEVSVKQGQLVSAGTQLMSVVPPERWII--ANIKETDMANVKIG 306

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYY----EVILKITDLA 397
            +A+V          K F   + +I P  + +      +  T  +      + +KI   A
Sbjct: 307 QSASVSIDALG---GKAFSGKVAEISPATASEFSLIKADSGTGNFVKIAQRIAVKIVFDA 363

Query: 398 FSDNNIELRNGFPAEVLFTAK 418
              +   L  G  AEV    K
Sbjct: 364 GQQDLERLAPGMSAEVNIATK 384



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 53/166 (31%), Gaps = 18/166 (10%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI- 110
              +V  +     G ++K  V +   +  G PL+  +       +   +  +   +  + 
Sbjct: 86  VRGSVTAVSPRVGGYVQKVLVRDFDNVKAGQPLVEIDPAPYRAKVAQAEAGLAGQQAALN 145

Query: 111 -------------DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY----HSTCSKVF 153
                           ++A+D    + D   + ++  +    D + +       T  K  
Sbjct: 146 KTAQDKASAIAVSKANQAAIDNARAQLDRARREWQRIQAVSADAVSQSSRDAAQTAVKQA 205

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             G+        +    + +  + R   +   +  +ALL   ++DL
Sbjct: 206 EAGLKQAQEQYAVAQQNIINTGVGREGAQAGIANAQALLDLAKQDL 251


>gi|293572175|ref|ZP_06683175.1| ABC transporter accessory factor [Enterococcus faecium E980]
 gi|291607749|gb|EFF37071.1| ABC transporter accessory factor [Enterococcus faecium E980]
          Length = 452

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 55/415 (13%), Positives = 142/415 (34%), Gaps = 40/415 (9%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
              E+ + +S +I      +E+    + II+   V    ++ +G  L+TF+         
Sbjct: 41  AKKEVVIRTSAKITANACKLEV-PIDTKIIENQLV-ENKEVKKGEKLVTFDAQNLQLQKA 98

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE-SREEQLLDFLGKYHSTCSKVFNYG 156
             +   + +    ++ +  +D LN   +  ++      E+QL   L +  +   ++    
Sbjct: 99  PLETENEQISKEKESAQRLIDSLNTDSNQFQQPDPFGYEDQLKSILSENTANQLEIEKKK 158

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT--------MMKNLFEK 208
           +++  +  +        +       +N+ +    + ++ Q   +        M +    +
Sbjct: 159 LAN-QKEQEAYQKANNQLTKQLQSYKNQVTEWEQVRTAWQNQQSLQGFPTEIMTEYQAWQ 217

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH-------------INELYDEANLEF 255
             V +    Q+E+     TL++ E I + K+M+               I     +    +
Sbjct: 218 TQVKEVSEEQKEQTKASITLQINERITQIKSMIEQLENEQVKLVEPTSIEPEIQKQTETY 277

Query: 256 ANYLKEISRDLEQNQRTFADEMSK----LTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               ++     +Q  +  +   +K    + +L +  +Q  I +PI G I  N        
Sbjct: 278 IQIKEQAITATKQKIKELSSTENKNKQTIQLLNEQIQQAVIKAPITGKIHLNDEVKGLTE 337

Query: 312 AQQSQPLMKIVPH--SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                 + +I P    +     A +    +  VK      ++  +   ++ +     + +
Sbjct: 338 IPTGTVIAEIYPALNKEKQLFTAYIPSSDMTRVKVNMPVHLKIDN-KGVKTEILNGKLTQ 396

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           I    ++     +  ++Y V   I+        +++R G   E+       T  Q
Sbjct: 397 I----AETSTPTEKGDFYLVKGTIS----IPKKLDIRYGITGELSLIIGKKTYLQ 443


>gi|170736150|ref|YP_001777410.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
 gi|169818338|gb|ACA92920.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
          Length = 364

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 50/371 (13%), Positives = 106/371 (28%), Gaps = 75/371 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    +G + K  V +  ++  G  L+  +  +           +      +D
Sbjct: 62  VGGDVTVLAPKVNGFVDKILVTDNQRVKAGDVLVQLDARDYDA-------KLAQASAEVD 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           + +SA+  L  K                                      + L+  +   
Sbjct: 115 SARSAVTELEAK--------------------------------------QQLQFAVIGQ 136

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +   N    E         L+    D    + L + +AVS   + + +    K+   + 
Sbjct: 137 HAADKNASSAE---------LTRAASDRVRYRELVKSDAVSNQIVERADADYSKAGAAVE 187

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   +      ++   +     E  T
Sbjct: 188 RSDAALLASKRQLDVL---------------GAQLADARARVNTALAAQRVAALNVEYTT 232

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +  N++      A    PL+ +VP S   +I A     Q++ ++ G    V 
Sbjct: 233 IRSPVDGYV-GNRTGRVGMLANVGVPLLTVVPASG-LWIDANFKEDQLRKMRAGDRVDVA 290

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN----IELRN 407
               +     +  ++        S       T  + +++ ++      D        LR 
Sbjct: 291 LDASSTRLHGRVDSLAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGIKHVLRP 350

Query: 408 GFPAEVLFTAK 418
           G  A V     
Sbjct: 351 GLSAVVTVHTD 361


>gi|156744089|ref|YP_001434218.1| secretion protein HlyD family protein [Roseiflexus castenholzii DSM
           13941]
 gi|156235417|gb|ABU60200.1| secretion protein HlyD family protein [Roseiflexus castenholzii DSM
           13941]
          Length = 477

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 60/442 (13%), Positives = 124/442 (28%), Gaps = 87/442 (19%)

Query: 39  PIEISVSSSGEILNEDN---VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           PI++ ++  GE+ +  +     +++    G + +  V+ G  + +G  L   +       
Sbjct: 56  PIQLGITGIGEVKSAQDANLSFQVQ----GTVAQVFVKEGDFVKKGDLLAILDTRAFDQQ 111

Query: 96  IDLKKVSI------------------------------------------KNLRCHIDTE 113
           ++  K ++                                          ++LR      
Sbjct: 112 LEQAKAALANALAQEAALTEDPRQTDLNAARAAVAQAQAALEALQRGPKEQDLRMAEAAL 171

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL--------- 164
            +A   L    D L  A    E Q+           ++      +  Y            
Sbjct: 172 AAAEANLQATRDRLSFAKTQAEIQMEQAAAALTQAQARYAQAKYNWEYARDTGNDPIVPE 231

Query: 165 ----KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                 +    +     R +   +     A L   +K L     L  K A S        
Sbjct: 232 VAAPNGQRVPNKLSDGQRENYYAQFVQAEAGLRQAEKAL----ELAVKGAESARQAEVTG 287

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-------RDLEQNQRTF 273
               ++ +E      E+  +    + L            +E               +   
Sbjct: 288 IQAAEAQVEQARLTLEKLRLPPDPDRLAAARAALAQARAQEARLIPDPRDSQKAAARAGV 347

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               + LT+ +  RE+  + +P  G +             Q  P ++IV      Y+  +
Sbjct: 348 EQAQAALTLAQINRERAELRAPFDGVVSIVSIDPGDPSVTQGLPAIQIV-DMSKLYVDVQ 406

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           ++   I  V++G +A +      D         +E + P  + Q  +      Y V + +
Sbjct: 407 ISDVDIARVREGQSAKISISSIPDREY---TGKVEYVAPTATVQGLSRS----YRVRIAL 459

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
            D+        LR G  A V  
Sbjct: 460 DDIT------GLRAGMSARVDI 475


>gi|300866994|ref|ZP_07111664.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300334977|emb|CBN56830.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 587

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/356 (11%), Positives = 113/356 (31%), Gaps = 36/356 (10%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             VEIK    G++ +  V++G  + QG  +   +       +   + ++   +  +   +
Sbjct: 119 RSVEIKPEIDGLVTEIFVKSGDFVEQGQAIARIKSDSAQADLRQSQANLIRAQSRLAELQ 178

Query: 115 SA----------LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           +                 + ++ +    SR E++     +     + + +    S+   +
Sbjct: 179 AGTRPEEIAQAQAQVAQAQANLAQLRSGSRPEEVGQGQARVSQAEADLADAQSGSLLEDI 238

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                ++ +          +    +AL          ++   +K+  ++ +L + +R   
Sbjct: 239 AQARAQIEASKAEAELASQQLVRYQALAQEGAASANTLQEYIQKDRSAKANLREAQRRFE 298

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANL-EFANYLKEISRDLEQNQRTFADEMS----- 278
           +     +  I  +   LR   E   +         +     ++ Q +   A+  +     
Sbjct: 299 QRQKNRQAEIERRTGALRQQREALRQLQNGSRPEEIARAEAEVAQAKSRLAELANGTRQE 358

Query: 279 --------------KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                         ++   E   ++  + +P AG I          Y Q+   ++  V  
Sbjct: 359 QLDQAEAQVAEAAAQVRGFEVQLQETALTAPFAGVIGDVPV-KVGYYLQKGD-VLTAVTE 416

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           ++L  +R  +  +++  ++ G    +         +   K  I  I P +S     
Sbjct: 417 NQLLDLRLSIPLERMPQLRLGLPVEM----LDAQGKAIAKGQISFISPNVSANSQT 468


>gi|292487905|ref|YP_003530780.1| putative RND efflux system, membrane fusion protein [Erwinia
           amylovora CFBP1430]
 gi|291553327|emb|CBA20372.1| putative RND efflux system, membrane fusion protein [Erwinia
           amylovora CFBP1430]
          Length = 398

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 84/287 (29%), Gaps = 15/287 (5%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           ++LDF   +        +  I    + +     ++        + + +     A++  +Q
Sbjct: 112 EVLDFQPVHRGDLLMTIDDRI--YRQRVHQSGAQLNMKKAALANNQQQRRSAEAVIERNQ 169

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             L   K    K  +    +         S  E   +      ML  + +      +   
Sbjct: 170 AALQNAKAQAVKGGLDLKRVEDLVADGSISVRERDASRASNSQMLAGVQQAQATLEVSRQ 229

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           +    I  +    +   A+  + L + +   +   I++P  G +          Y     
Sbjct: 230 DLQTTIV-NRASLEADVANARAALELAQIDLDNTRIIAPRDGQLGQIAVR-QGAYVTAGT 287

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  +VP        A +   Q+  ++ G               + F   +E I P    
Sbjct: 288 RLTSLVPQQMWLI--ANMKETQMARIRPGLPVIFTVDALD---GESFNGEVEYISPAAGS 342

Query: 377 Q----DNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +      +  T  + ++   + +     SDN   LR G   EV    
Sbjct: 343 EFSAISPDNATGNFVKIAQRIPVRIKITSDNAAHLRPGMSVEVTINT 389



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 76/216 (35%), Gaps = 20/216 (9%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIK 104
               V  I    SG I   +V +   + +G  L+T +D        ++   +++KK ++ 
Sbjct: 93  VRGQVTFISPQVSGYITAVEVLDFQPVHRGDLLMTIDDRIYRQRVHQSGAQLNMKKAALA 152

Query: 105 N-----LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN----- 154
           N            E++     N K   ++   + +  + L   G                
Sbjct: 153 NNQQQRRSAEAVIERNQAALQNAKAQAVKGGLDLKRVEDLVADGSISVRERDASRASNSQ 212

Query: 155 --YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
              G+     +L++    +++  +NR  LE   +  RA L   Q DL   + +  ++   
Sbjct: 213 MLAGVQQAQATLEVSRQDLQTTIVNRASLEADVANARAALELAQIDLDNTRIIAPRDG-Q 271

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +  ++     +   L   + +Q  ++ ++ E  
Sbjct: 272 LGQIAVRQGAYVTAGTRLTSLVPQQMWLIANMKETQ 307


>gi|254711383|ref|ZP_05173194.1| HlyD family secretion protein [Brucella pinnipedialis B2/94]
 gi|254711982|ref|ZP_05173793.1| HlyD family secretion protein [Brucella ceti M644/93/1]
 gi|254715052|ref|ZP_05176863.1| HlyD family secretion protein [Brucella ceti M13/05/1]
 gi|256029987|ref|ZP_05443601.1| HlyD family secretion protein [Brucella pinnipedialis M292/94/1]
 gi|256158151|ref|ZP_05456067.1| HlyD family secretion protein [Brucella ceti M490/95/1]
 gi|256252898|ref|ZP_05458434.1| HlyD family secretion protein [Brucella ceti B1/94]
 gi|261216759|ref|ZP_05931040.1| secretion protein HlyD family protein [Brucella ceti M13/05/1]
 gi|261219986|ref|ZP_05934267.1| secretion protein HlyD family protein [Brucella ceti B1/94]
 gi|261318989|ref|ZP_05958186.1| secretion protein HlyD family protein [Brucella pinnipedialis
           B2/94]
 gi|261319626|ref|ZP_05958823.1| secretion protein HlyD family protein [Brucella ceti M644/93/1]
 gi|265987008|ref|ZP_06099565.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M292/94/1]
 gi|265996669|ref|ZP_06109226.1| secretion protein HlyD family protein [Brucella ceti M490/95/1]
 gi|260918570|gb|EEX85223.1| secretion protein HlyD family protein [Brucella ceti B1/94]
 gi|260921848|gb|EEX88416.1| secretion protein HlyD family protein [Brucella ceti M13/05/1]
 gi|261292316|gb|EEX95812.1| secretion protein HlyD family protein [Brucella ceti M644/93/1]
 gi|261298212|gb|EEY01709.1| secretion protein HlyD family protein [Brucella pinnipedialis
           B2/94]
 gi|262550966|gb|EEZ07127.1| secretion protein HlyD family protein [Brucella ceti M490/95/1]
 gi|264659205|gb|EEZ29466.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M292/94/1]
          Length = 405

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 90/289 (31%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 129 IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 188

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++   L     +  +   +I+ L          
Sbjct: 189 TMARVQKLHETRFVAQSELDNAQSALDQARARLAGADAQIASAKTNISVL---------- 238

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                     +   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 239 -----EAQYNEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 292

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P     
Sbjct: 293 IAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAV 348

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++IT    +  + ++R G    V    +
Sbjct: 349 FSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDTR 397



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 65/257 (25%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +   +  +    +D     +       +
Sbjct: 97  VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 156

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 157 RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSALDQ 216

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+          +   S+L A  +        ++ L    A                
Sbjct: 217 ARARLAGADAQIASAKTNISVLEAQYNEAASSTKSLE-LARDKAARDLSFTSLRAPFDGV 275

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +     + I  L     L      KE      +   T    +  +   +  
Sbjct: 276 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETQLAHIKVGETAHIYVDAIDGTKFD 335

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 336 GKVASI-APASGAVFSL 351


>gi|222529504|ref|YP_002573386.1| secretion protein HlyD family protein [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222456351|gb|ACM60613.1| secretion protein HlyD family protein [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 365

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 63/400 (15%), Positives = 128/400 (32%), Gaps = 45/400 (11%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           K + L S   I            +  + SS     E   ++I S  +G ++K  VE GS+
Sbjct: 9   KLVLLSSFCIIFLFFLTGCKAKNDEDIYSS---TVEVKSIDINSEIAGRVEKVYVEEGSK 65

Query: 78  ILQGTPLLTFED--IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           + +G  +   +   +E    + L  + I  +   I  E   +  L               
Sbjct: 66  VKKGDVIAKLDSGILEIQKNLSLYNLEIAKISSEIAKENLEIAKL--------------- 110

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                   KY     K   Y +  +  ++            N   L      L+A+  S+
Sbjct: 111 --------KYALVNKKPSKYQLEQLKENIFQLEALKEGNTKNISLLRKAIEDLKAVRVSN 162

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            + L  +  L       +  LN  E        ++     E +  +     +  E    +
Sbjct: 163 TEMLKTLTEL-------KIQLNSLEAQNESVAHQINSL--EVQLQMVKNENVMPEDKSIY 213

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  ++   ++  Q           L + E+  ++ +I+SP  G I   +      +    
Sbjct: 214 AISVEIAQKNYSQALEYVKIAEGNLKLCEENLKKASIISPADGII-SIKGVEEGQFIGPG 272

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             + +I       Y++  V   ++  VK G    +          +K    I  I     
Sbjct: 273 SFVAQI--SLDHYYLKIYVPSTKLGKVKIGKEVNI-----VSEEGQKAYGKIVYISDKAE 325

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               N++T+E    ++ +  +  + N   L+ G   +V+ 
Sbjct: 326 FTPRNVETKEERHNMVFMVKINITKNKDILKPGMIVDVIL 365


>gi|111657264|ref|ZP_01408031.1| hypothetical protein SpneT_02001522 [Streptococcus pneumoniae
           TIGR4]
          Length = 419

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 59/417 (14%), Positives = 137/417 (32%), Gaps = 31/417 (7%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           + +S++   EI+V+S GEI     +  I+S   + I+    V N   + +G  L+ + + 
Sbjct: 1   MIFSLVATKEITVTSQGEIAPTSVIASIQSTSDNPILANHLVAN-QVVEKGDLLIKYSET 59

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE----------SREEQLLD 140
                       ++ L    +        L    D+     E          +++   ++
Sbjct: 60  MEESQKTALATQLQRLEKQKEGLGILKQSLEKATDLFSGEDEFGYHNTFMNFTKQSHDIE 119

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                 +T         +S   +++ ++T+++       +L +     RA L +     +
Sbjct: 120 LGITKTNTEVSNQANLSNSSSSAIEQEITKVQQQIGEYQELRDAIINNRARLPTGNPHQS 179

Query: 201 MM-KNLFEKNAVSQ--------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           ++ + L      +Q        + +NQ    +  S   L+       ++  + N L  + 
Sbjct: 180 ILNRYLVASQGQTQGTAEEPFLSQINQSIAGLESSIASLKIQQAGIGSVATYDNSLATKI 239

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +    +L+  S+     +    +   +L    +  E  T+ SP  G +  N  F   N 
Sbjct: 240 EVLRTQFLQTASQQQLTVENQLTELKVQLDQATQRLENNTLTSPSKGIVHLNSEFEGKNR 299

Query: 312 AQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 + +I P    ++   I   V+   +  + KG T  ++     +         ++
Sbjct: 300 IPTGTEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQTVRLKLEKIGNHGT-TIIGQLQ 358

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            ID   ++ +     +      L   D         ++ G    V       T    
Sbjct: 359 TIDQTPTRTEQGNLFKLTALAKLSNEDSKL------IQYGLQGRVTSVTTKKTYFDY 409


>gi|312888648|ref|ZP_07748217.1| putative hemolysin secretion protein [Mucilaginibacter paludis DSM
           18603]
 gi|311298962|gb|EFQ76062.1| putative hemolysin secretion protein [Mucilaginibacter paludis DSM
           18603]
          Length = 444

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 74/229 (32%), Gaps = 11/229 (4%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           LF + A ++ D ++       S    +  + +  +    I+   ++          E S+
Sbjct: 213 LFSQKAATEEDFDRSNISFLSSKENYQSIVTDINSTEETISTDQNKLQQLSIQKDDEESQ 272

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                  ++ D    +   E+        SP++G + +++ ++ + + Q  + +  +VP 
Sbjct: 273 MNLDVLTSYGDLKDAIKAWEQKF---VFKSPMSGILEFSKFWTKNQFVQSGEDVFTVVPD 329

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                 +  +       VK G    ++  +Y          ++  I    S+   N    
Sbjct: 330 KNHIIGQVDLPANGAGKVKIGQKVIIKLDNYPFEEYGSVSGLVSSISLTKSKMKVNQDDV 389

Query: 385 EYYEVILKITDLAFSDNNIEL-----RNGFPAEVLFTAKNTTLAQEIIH 428
           + Y V + + +   ++    L       G        +   +L      
Sbjct: 390 DIYLVEVTLPNGLTTNYKSNLEFKYEIKG---TADIVSNERSLLSRFFD 435


>gi|256262897|ref|ZP_05465429.1| multidrug resistance protein A [Brucella melitensis bv. 2 str.
           63/9]
 gi|263092734|gb|EEZ16943.1| multidrug resistance protein A [Brucella melitensis bv. 2 str.
           63/9]
 gi|326410303|gb|ADZ67367.1| secretion protein HlyD family protein [Brucella melitensis M28]
 gi|326553596|gb|ADZ88235.1| secretion protein HlyD family protein [Brucella melitensis M5-90]
          Length = 405

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 90/289 (31%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 129 IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 188

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++   L     +  +   +I+ L          
Sbjct: 189 TMARVQKLHETRFVAQSELDNAQSALDQARARLAGVDAQIASAKANISVL---------- 238

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                     +   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 239 -----EAQYNEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 292

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P     
Sbjct: 293 IAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAV 348

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++IT    +  + ++R G    V    +
Sbjct: 349 FSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDTR 397



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 66/257 (25%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +   +  +    +D     +       +
Sbjct: 97  VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 156

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 157 RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSALDQ 216

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+  +       +   S+L A  +        ++ L    A                
Sbjct: 217 ARARLAGVDAQIASAKANISVLEAQYNEAASSTKSLE-LARDKAARDLSFTSLRAPFDGV 275

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +     + I  L     L      KE      +   T    +  +   +  
Sbjct: 276 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETQLAHIKVGETAHIYVDAIDGTKFD 335

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 336 GKVASI-APASGAVFSL 351


>gi|148653630|ref|YP_001280723.1| RND family efflux transporter MFP subunit [Psychrobacter sp.
           PRwf-1]
 gi|148572714|gb|ABQ94773.1| efflux transporter, RND family, MFP subunit [Psychrobacter sp.
           PRwf-1]
          Length = 464

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 56/393 (14%), Positives = 120/393 (30%), Gaps = 87/393 (22%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  +E +V +SG++    N V++ +  SG + K  V+ G ++ +G  +   + +    
Sbjct: 48  AEMGDVENNVMASGKVK-ALNTVDVGAQVSGEVTKLFVDVGDEVKKGDLIAQIDQVT--- 103

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
                                                               S       
Sbjct: 104 -----------------------------------------------QKNNLSNQQATLE 116

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
            G +++  +     +R   +   + DL ++ + L+      Q D   ++ L   +A+SQ 
Sbjct: 117 QGRAALQSAQADYYSRKAGLESAQADLASREADLKQ----AQSDYARLRPLLAMDAISQQ 172

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++      V K+   +       K     +           A+  K              
Sbjct: 173 EVENARTTVEKAQASVAAAKAAIKTAQAALITAQSNIASSEADVRK-------------- 218

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRA 332
              + L          TI +P+ GT+V             +Q    IV  +      I A
Sbjct: 219 -AQTNLDTASTDLGYTTIRAPMDGTVVAV-VTEQGTTVNANQAAPTIVKLADLSTVRINA 276

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREK--KFKAIIEKIDPIISQQDNNLQTQE--YYE 388
           +++   + +VK G        ++  I +   K+ AI+  ++P   Q  +   T    YY 
Sbjct: 277 QISEADVINVKAGMPV-----YFNTIGDPDKKYDAILTAVEPAPEQISDTSSTDSAIYYV 331

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             +++ +         +     A+V       T
Sbjct: 332 GYIEVPNPER---RFRI--DMTAQVYVIIDKAT 359


>gi|239907349|ref|YP_002954090.1| secretion protein HlyD family protein [Desulfovibrio magneticus
           RS-1]
 gi|239797215|dbj|BAH76204.1| secretion protein HlyD family protein [Desulfovibrio magneticus
           RS-1]
          Length = 422

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 54/389 (13%), Positives = 112/389 (28%), Gaps = 90/389 (23%)

Query: 35  SILLPIEISVSSSGEILNE-DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           + L  +   + ++G I  +   +V+I +  +G IK+  V+ G ++ +   +   +     
Sbjct: 39  ASLGNVRKVLEATGIIKAQVGAIVKIGARATGTIKEMHVKVGDEVKRDQLIAVIDS---- 94

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                     + LR  +D  ++ L   N +   +E  +  R                   
Sbjct: 95  ----------RELRSQLDEAEARLARANAELSQVETVYPRR------------------- 125

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                                     + E +  L +A        L     LF K  V++
Sbjct: 126 ------------------------IAEAEAELRLSQAKYDYAASTLKRQDELFRKELVAR 161

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + L+   R    S  E+                              E  ++L + QR  
Sbjct: 162 DVLDAARRDNLVSQNEVLAR------------------EASLVRVRTEFEKELIKAQRVR 203

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA- 332
            +  + +           I+SPI G +V   +  +         +  ++     + +   
Sbjct: 204 DEAQAVIDSANTKISYTRIVSPIDG-VVALVTSQAGETVVAGLQVANLITVLDPSRLEMW 262

Query: 333 -KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             V    +  VK       R   Y       FK  + +I P    Q        YY+ ++
Sbjct: 263 IYVDETDVGQVKAAMPVEFRVDAYPGTT---FKGSVNQIYP----QPEIRDNIVYYQALV 315

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           ++     S    +LR     +     +  
Sbjct: 316 RLDPAESS----KLRPEMTTQCQIVVQEK 340


>gi|254286143|ref|ZP_04961103.1| multidrug resistance protein VceA [Vibrio cholerae AM-19226]
 gi|150423812|gb|EDN15753.1| multidrug resistance protein VceA [Vibrio cholerae AM-19226]
          Length = 406

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 49/378 (12%), Positives = 105/378 (27%), Gaps = 63/378 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E+     GII +  V +   + QG  L+  +D +    +   +  +   +  + +  +  
Sbjct: 73  EVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLAND 132

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + L+                                                 + +   N
Sbjct: 133 EGLS-----------------------------------------------AMVEAQEAN 145

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              ++ +    +A     + DL+  ++L    +VS  +L   +    ++   L       
Sbjct: 146 EQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAM 205

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                             A            +        ++    +   E+  I +PI+
Sbjct: 206 AQAQATKLSTIGSQKANAALTDNTTV----DSNPEVLLAKARYEQAKIDLERTVIRAPIS 261

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q        Q   PLM +VP     Y+ A     +++ VK G   T+    Y D
Sbjct: 262 GIVAKRQV-QVGRRVQVGMPLMTVVPTDH-IYVDANFKEVELRDVKVGQPVTLTADLYGD 319

Query: 358 IRE--KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN---G--F 409
                              S       T  + +V+ ++   +  +  +++      G   
Sbjct: 320 DVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELNPKDLQAYPLQVGLSM 379

Query: 410 PAEVLF--TAKNTTLAQE 425
            A +    T    TL Q 
Sbjct: 380 VATIDTAGTTDPQTLVQY 397


>gi|281358091|ref|ZP_06244575.1| efflux transporter, RND family, MFP subunit [Victivallis vadensis
           ATCC BAA-548]
 gi|281315464|gb|EFA99493.1| efflux transporter, RND family, MFP subunit [Victivallis vadensis
           ATCC BAA-548]
          Length = 508

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 57/369 (15%), Positives = 128/369 (34%), Gaps = 24/369 (6%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           ++  S++  G  +  FE     + I+  ++   NL+  +D  +       +   V  ++ 
Sbjct: 94  IDENSKVKAGDVMAKFETDSLKEKIEDLEIEALNLQKELDLARENAKIQESTNAVDLQSA 153

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E    Q  D L KY           +     + +  L + R+ Y    D E  +   ++ 
Sbjct: 154 EEALSQADDALRKYRRFERTSKRDELDLAIDTAQSNLDKARTDYETARDAEVDA---KSG 210

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQE--RIVYKSTLELRENIHEQKNMLRHINELYD 249
             + +K    +K+   K   ++N L   E  R V++   +    +    N L        
Sbjct: 211 EDADEKKRQSLKDAQAKIDEAENKLATAEDNRKVFRRY-DHPSKMTRLLNALEQAKLNLR 269

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN------ 303
           +  +   + + +  + +E  +R       +L   ++   Q  +++P+ G ++Y       
Sbjct: 270 KTKISTESKMIQQVKSIENLRRRLRRTNEQLNRYKEYMTQMVLIAPVDGVVIYGDPDNRW 329

Query: 304 --QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                       + Q L+ I P      +   +  +    +K G  A +       +  +
Sbjct: 330 SRLDVKPGIDVGKGQILITI-PEMSNLIVDFDLPEQYRSKLKIGDRAVI---SPDSLPGE 385

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           KF+  I  ID +     N   +       +  + + F   +  L NG   ++       T
Sbjct: 386 KFEGQISHIDTLPVNLVNWDSSSP----KIYKSKIRFDKQSPRLVNGMSVQISVVT--KT 439

Query: 422 LAQEIIHPI 430
           + Q +  P+
Sbjct: 440 IPQTLFVPV 448


>gi|291562288|emb|CBL41104.1| RND family efflux transporter, MFP subunit [butyrate-producing
           bacterium SS3/4]
          Length = 587

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 47/399 (11%), Positives = 111/399 (27%), Gaps = 55/399 (13%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E+ S   G + +   E G  + +G  L   +       +   + S++  +    T +S  
Sbjct: 82  EVTSLVEGEVIEANFEEGDVVEKGQILYRIDATSMDSDLSSAETSLQRAKESAQTAQSNY 141

Query: 118 DFLNNKYD----------------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                +                  + E    +   ++ D         +  F  G ++  
Sbjct: 142 AEETARIAGNTYRSTASGYIKTLYIKEGDKVNNGTKIADLYDDSVMKITVPFLSGEAAEI 201

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL---------------- 205
                    +              S +   LS  +    +   +                
Sbjct: 202 NVGDEAAVILEDTGEQISGTVTVVSSMEETLSGGRLVKNVTVEVSNPGGLTTDTAASVKV 261

Query: 206 ------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                  E    ++ +      I    +LE+   +  + + +   +EL+         YL
Sbjct: 262 DGFVCSAEGTFAAKTETTLSVEISGNKSLEIENLLIHEGSYVEKNSELFQVTAKTAEEYL 321

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA---QQSQ 316
           KE    +E       +  +KL+  + + +  TI +PI+GT++   +    +         
Sbjct: 322 KEFKDAVESADDNLENAENKLSNTQDSVDDYTITAPISGTVITKNA-KVGDKISKSSSGT 380

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
             M ++       +   V    +  +K G +  +       +  + F   +  +    S 
Sbjct: 381 TTMAVIYDLSTMTLEMSVDELDVSSIKVGQSVEI--TA-DAVEGETFTGTVTNVSLQSSY 437

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +        Y V + + D         L  G   +   
Sbjct: 438 SNGVTN----YPVTVTLDDTG------SLLPGMNVDAKI 466


>gi|325928613|ref|ZP_08189798.1| Membrane fusion protein RaxA [Xanthomonas perforans 91-118]
 gi|325541046|gb|EGD12603.1| Membrane fusion protein RaxA [Xanthomonas perforans 91-118]
          Length = 447

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 51/391 (13%), Positives = 119/391 (30%), Gaps = 52/391 (13%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G ++    ++ + +P SG++ +     G ++  G  L                       
Sbjct: 95  GTVVPAGGLISVTTPQSGVVVQVGAVQGQRVAAGQLLFVLS------------------- 135

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                  +       +         + +++L            +V     +     L+ +
Sbjct: 136 -------AEHRDDRGRPTQRAAVVLAEQQRLAVEAMAQLRAQGRVQQQAAARALAGLRDR 188

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS- 226
           L +          ++ +  LLR      Q      +    +  VSQ  +++++  V    
Sbjct: 189 LQQ----------IDAELDLLRHRQQLTQSIEQRYRTALTRGLVSQQFVDEKQADVLDQR 238

Query: 227 --TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
             TLEL+       + L        +        L      L++++R   ++ +      
Sbjct: 239 AHTLELQRERMALADALAQAQAEVQQLPSNLRQQLAMAGAGLQEDRRAAIEQAAA----- 293

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
               +  + +P AG +   +         Q Q L  ++P S  T +      +    +  
Sbjct: 294 ---SRWEVRAPRAGRV-ALRPLQRGQAVAQGQRLADLLPTSMATEVVLYAPSRAAGLIGP 349

Query: 345 GYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           G    +RF         +F   + +I   P   + D+   ++  Y V +++   A     
Sbjct: 350 GMPVQLRFDALPYQHYGQFAGQVVEIAVAPEPPRVDSVSVSEPLYRVRVRLAGDAALRAG 409

Query: 403 IE--LRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               LR G   +     +    +Q    P++
Sbjct: 410 RTAVLRPGMRVQGTLALEWRRFSQWAFEPLS 440


>gi|270295681|ref|ZP_06201882.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274928|gb|EFA20789.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 365

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 58/366 (15%), Positives = 111/366 (30%), Gaps = 85/366 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IKK       ++ +G  LL  +D          K+ +      +   ++    +   
Sbjct: 75  SGYIKKICFTEHQEVHKGDTLLILDD-------REYKIRVMEAEAALKDAQAGATVIGAT 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +      +  + +                                           
Sbjct: 128 LQTTQTTASVYDASIAE------------------------------------------- 144

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               +   L+  +KD    +NL ++NA +   L Q E     +  +L     +QK  L  
Sbjct: 145 ----IEIRLTKLEKDRQRYQNLVKRNAATPIQLEQIETEYAATHKKLEAVKRQQKAALSG 200

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +N               E+S   E  +       + L +         +++P  G  +  
Sbjct: 201 VN---------------EVSHRRENTEAAIQRATAALEMARLNLSYTVVVAPCDGK-LGR 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     +    Q +  I+P ++   I A     QI+++  G    +     +D   K+F
Sbjct: 245 RTLEEGQFITAGQTITYILPDTQKWII-ANYKETQIENLHLGQEVVITVDAISD---KEF 300

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           K  I  I           P  +   N ++ Q+   V +  TDL+  DN+  L  G    V
Sbjct: 301 KGKITAISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTDLSKEDNS-SLAAGMMVIV 359

Query: 414 LFTAKN 419
               K 
Sbjct: 360 KAKTKK 365


>gi|16329241|ref|NP_439969.1| hypothetical protein sll1053 [Synechocystis sp. PCC 6803]
 gi|1651721|dbj|BAA16649.1| sll1053 [Synechocystis sp. PCC 6803]
          Length = 520

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 93/313 (29%), Gaps = 28/313 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V  G ++ QG  L   ++    D++  + +  +        + + L+  + + 
Sbjct: 113 GRVEEILVREGQRVEQGQVLFRIDN----DVLQTQLLEAQANLAAARAQLAELEAGSRQE 168

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DV   A + R+        +  +         I+     L                  N 
Sbjct: 169 DVAAAAAQLRQA-----QTRLANAQGGASPEEIAQAQAQLDSAKAAAELASERVRRFRNL 223

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  L ++ + L   +        +Q  L Q  +        L   +  Q+  L  +
Sbjct: 224 RDQGVISLDAYDQQLKEERQAIADVEAAQRRLQQLRQARSSDVERLTAEVDAQRQNLNRL 283

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                           E    + Q +      ++ +  L+   ++  I +P AG + Y  
Sbjct: 284 QA-------------GERPETIAQARARVGQALASVKTLQARLDKSEITAPFAGVVGYIP 330

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                +Y Q +  L  +   ++   +   V   Q   ++ G    +         +   +
Sbjct: 331 V-KLGDYVQANDDLTNLT-ENQQLDLNLAVPLAQAPRLRPGLVVEI----LDGQEKAIAR 384

Query: 365 AIIEKIDPIISQQ 377
             I  + P +   
Sbjct: 385 GQISFVSPDVDND 397


>gi|154245459|ref|YP_001416417.1| secretion protein HlyD family protein [Xanthobacter autotrophicus
           Py2]
 gi|154159544|gb|ABS66760.1| secretion protein HlyD family protein [Xanthobacter autotrophicus
           Py2]
          Length = 405

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 48/363 (13%), Positives = 96/363 (26%), Gaps = 82/363 (22%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +K   V     +  G  +   +D + T       ++++  +  I T+++AL   + +
Sbjct: 113 GGYVKSVDVVANQWVKAGDVIARIDDGDYT-------LALRAAQDKIATQEAALSRFDEQ 165

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               E A      QL+                                            
Sbjct: 166 EKAAEAAVAQARAQLVANQAD--------------------------------------- 186

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                   L   Q +      L   +  SQ+ L+                    ++  + 
Sbjct: 187 --------LQRTQLEFDRQNKLASSHFASQSVLDNARAD---------------RDKAQA 223

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                  A       +  I     +  R      +     ++  +   + +PI G +V N
Sbjct: 224 NVAAGQAAVASAEAAVAVIKAQRTEAARVLDQYRTARDQAQRDLDFTVVRAPIDG-VVGN 282

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++       Q    L  +VP     Y+ A     Q+  + +G    V    Y D     F
Sbjct: 283 RAVQVGQLVQAGTRLAAVVPL-AGVYVDANFKETQLGRLHQGQKVRVSVDAYPDR---DF 338

Query: 364 KAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              +  + P           +      T+    V ++I   A +     LR G     + 
Sbjct: 339 VGTVMSVSPASGSVFSLLPPENATGNFTKIVQRVPVRIGFDAGALEGRNLRPGMSVTAVV 398

Query: 416 TAK 418
             +
Sbjct: 399 DTR 401


>gi|319789835|ref|YP_004151468.1| secretion protein HlyD family protein [Thermovibrio ammonificans
           HB-1]
 gi|317114337|gb|ADU96827.1| secretion protein HlyD family protein [Thermovibrio ammonificans
           HB-1]
          Length = 420

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 49/375 (13%), Positives = 132/375 (35%), Gaps = 29/375 (7%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I K  V+   ++ +G PL   +D    + +   +  +K +   I+  K  L  L  +
Sbjct: 51  SGKIVKLYVKEFQRVSKGQPLFKVDDSSYRERLRQVEAQLKAVDAQIEAAKLRLSRLQVQ 110

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                   E+        +       S+      +++ ++         ++   ++DLE 
Sbjct: 111 LPASVGEAEAALSGAKASVSALGRQLSEAEANYRATLAQAQAAVPAARSALEAAKVDLER 170

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNA----------VSQNDLNQQERIVYKSTLELREN 233
               L    + +++ +  ++   +  A           +++ L Q +  + K+   L+E 
Sbjct: 171 WRRRLERYRALYERRVISLQQFEDVKAAYYKALSAYRAAESRLVQADSSLKKAEA-LKEQ 229

Query: 234 IHEQKNMLRHINELY---------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           +   +  L+ +              EA+L+     + + ++L   ++    + +++ +L 
Sbjct: 230 VKALEARLKAVRAKVVAYGQRLKASEASLKQIEETRALLKELLARRKALVAQEAQVKLL- 288

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
                  + SP++G +   +     ++     P+   V      Y+ A +   +++ ++ 
Sbjct: 289 --LSHTLVRSPVSGFVAK-RWKEVGDFTSPGLPVFS-VYDPSSFYVLAWIDEDKVRFIRN 344

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G    V         + +  A+      + +    +    EY  V+ ++  +     N+ 
Sbjct: 345 GTEGRVELETCGRSFKARVVAVGRSAGSVFALIPRDTSQGEYTRVVQRVP-VKIKVFNVP 403

Query: 405 L---RNGFPAEVLFT 416
           L   + G    V   
Sbjct: 404 LECVKPGTNVTVYLR 418


>gi|221197004|ref|ZP_03570051.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD2M]
 gi|221203677|ref|ZP_03576695.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD2]
 gi|221175843|gb|EEE08272.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD2]
 gi|221183558|gb|EEE15958.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD2M]
          Length = 372

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 51/427 (11%), Positives = 113/427 (26%), Gaps = 99/427 (23%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK-------SP 62
            RN  +  + +  ++++  IG   W             G  +   N   ++         
Sbjct: 20  PRNGVSKRRILLAIAVLAAIGGAVW--FARWWTV----GRFIESTNDAYLQADSMTAAPK 73

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G +    V +   +  G PL+                     R  +   + ALD  N 
Sbjct: 74  VAGYVTDVYVRDNQPVKAGDPLV---------------------RLDVRPYQVALDQANA 112

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             D         E ++           ++     I++ + S                   
Sbjct: 113 TVDARRADIARAEAEISQQRANLEQAQAQAKVSQINARHAS------------------- 153

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                          +      L    A ++  +            EL+    +    L 
Sbjct: 154 --------------DEYARYAPLAATGAETRERV-----------AELKSTRDQALATLA 188

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
             N     A  + A++       L+Q +       +         +  T+ + + G +  
Sbjct: 189 ANNAAIAAARTQIASF----GAQLQQARAQLEAAQASAAQSRLDLDNTTVRATLDGRV-G 243

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           +++     Y Q    L+ +VP   +  + A     QI  ++ G    +      D     
Sbjct: 244 DRTVRVGQYVQPGTRLLTVVPVDAIYLV-ANFKETQIGRMRVGQPVELHVDALPDDT--- 299

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDNNIELRNGFPAE 412
              +++   P    Q         T  + +      V ++I     + +   L  G    
Sbjct: 300 LSGVVDSFAPGTGAQFALLPPENATGNFTKIVQRVPVRIRIAPDERARH--MLLPGLSVT 357

Query: 413 VLFTAKN 419
           V    ++
Sbjct: 358 VDVDTRS 364


>gi|189426706|ref|YP_001953882.1| hypothetical protein Glov_3663 [Geobacter lovleyi SZ]
 gi|189422965|gb|ACD97362.1| hypothetical protein Glov_3663 [Geobacter lovleyi SZ]
          Length = 343

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 77/201 (38%), Gaps = 17/201 (8%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           NDL Q E  +  +  EL + I + +       ++    + +  + + +I+      Q   
Sbjct: 107 NDLFQAEESLKAARAELLKTIRKYEMSYAVYKDVIPTLSEKKVSEIPDIAI----LQSIV 162

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVY-NQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
             E  ++ +  K  ++  + SPIAG +V  +         ++ + +  IV       ++A
Sbjct: 163 NKEEKQVEMRRKKVKKTRLFSPIAGVVVTPDLQKRVGTSIKEGETVA-IVADLSKWVVKA 221

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI-----------ISQQDNNL 381
            V  + I  V+ G T  ++   +  +  K F   +  I  I            S  + + 
Sbjct: 222 YVPERDIPKVRIGDTTKIKISAFPFMEFKVFTGTVTAISSIPMLKLNTEIMNQSADEKDE 281

Query: 382 QTQEYYEVILKITDLAFSDNN 402
           + Q Y+EV + + D     N 
Sbjct: 282 KQQRYFEVTIDLADSYAKKNG 302



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 53/142 (37%), Gaps = 11/142 (7%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            +  + ++V + G +       E+++     IK+    +G  + +   ++   + +  + 
Sbjct: 50  SVFSVNLAVRAKGALEPATYS-EVRTEIPSTIKQVHCNSGDIVAKDQLIVELTEDQYHND 108

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKY-DVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           +   + S+K  R  +       +     Y DV+    E +  ++ D           +  
Sbjct: 109 LFQAEESLKAARAELLKTIRKYEMSYAVYKDVIPTLSEKKVSEIPDI---------AILQ 159

Query: 155 YGISSVYRSLKMKLTRMRSIYL 176
             ++   + ++M+  +++   L
Sbjct: 160 SIVNKEEKQVEMRRKKVKKTRL 181


>gi|257454413|ref|ZP_05619675.1| macrolide-specific efflux protein MacA [Enhydrobacter aerosaccus
           SK60]
 gi|257448179|gb|EEV23160.1| macrolide-specific efflux protein MacA [Enhydrobacter aerosaccus
           SK60]
          Length = 436

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 58/379 (15%), Positives = 119/379 (31%), Gaps = 76/379 (20%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV S+G+I     V ++ +  SG + K  VE G  + +G  +   + +   + +   
Sbjct: 48  IENSVMSTGKIEGIKQV-DVGAQVSGEVTKLYVEVGDTVKKGDVIAQIDPVTLQNTL--- 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
                                                          +T         ++
Sbjct: 104 -----------------------------------------------TTQQATLQQSKAN 116

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +  +     T+  ++   R DL+ K + L+      Q +   +K+L   NA+S+ +L Q 
Sbjct: 117 LESTKSAYQTKQAALATARADLKGKIATLQQS----QTEYNRLKSLLAMNAISKQELEQA 172

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
              V  +   +            +I                    D+   Q+T     + 
Sbjct: 173 GTAVKTAQANVDSAKEAIATAQANIASS---------------QADIVSAQQTIKKSQTD 217

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPK 337
           +   EK      I++P++GT++   +         +Q    IV  +      ++AK++  
Sbjct: 218 VNTAEKNLGYSQIVAPMSGTVISI-TTKQGQTVNANQSAPTIVTLADLSSVRVKAKISEA 276

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            + ++K G           D +    +A +  I P       +  +      I  I    
Sbjct: 277 DVVNLKVGLPVYFNIIGRPDKKY---QATLSTIGPAPDGTTASDSSTSTDSAIYYIGYFT 333

Query: 398 FSDNNIELRNGFPAEVLFT 416
             + +  LR    A+V   
Sbjct: 334 VPNPDGALRINMTAQVYIV 352


>gi|172062827|ref|YP_001810478.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
 gi|171995344|gb|ACB66262.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
          Length = 373

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/362 (10%), Positives = 86/362 (23%), Gaps = 82/362 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V +   +  G PL+  +       I   +V +      +D  ++         
Sbjct: 77  GYVTDVYVRDNQVVKAGDPLVRLD-------IRQYQVVLAQSTATVDARRA--------- 120

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                  +      +     N    E +
Sbjct: 121 --------------------------------------DIARAEADISQQRANLEQAEAQ 142

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + + +        +      L    A +   +   +    ++   L  N          I
Sbjct: 143 AKVSQINARHASDEYARYAPLAATGAETHERVADLKSTRDQAVATLAANTASIAAARTQI 202

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                             +  L+Q +       +         +   + S + G +  ++
Sbjct: 203 AS---------------FTAQLQQARAQLEAAQASAAQARLDLDNTIVRSTLDGRV-GDR 246

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     Y Q    L+ +VP   +  + A     QI  ++ G    +      D       
Sbjct: 247 TVRVGQYVQPGTRLLTVVPVDAIYLV-ANFKETQIGRMRIGQPVELHVDALPDDT---LS 302

Query: 365 AIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             ++   P        +  +      T+    V ++I   A +     L  G    V   
Sbjct: 303 GTVDSFAPGTGAQFALLPPENATGNFTKIVQRVPVRIRLAANARAPRMLLPGLSVTVDVD 362

Query: 417 AK 418
            +
Sbjct: 363 TR 364


>gi|332662661|ref|YP_004445449.1| NHPM bacteriocin system secretion protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332331475|gb|AEE48576.1| NHPM bacteriocin system secretion protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 422

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 108/351 (30%), Gaps = 63/351 (17%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W  +  ++  ++++G +L    V ++ S   G +    +  G ++ +G  +   +  E  
Sbjct: 49  WGCVGQVKTKINTAGILLG-GEVYDVVSTSQGQLVSLSIAVGDEVRKGQVIAAVDQPELL 107

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             ++  + +++  +  ++                         QLL F  K       + 
Sbjct: 108 QQVEAAEAALQERQYELE-------------------------QLLAFGSKDARLQHDL- 141

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                               I   RL L+ +       ++  ++ L   +NL +K  +++
Sbjct: 142 --------------------IAQQRLSLKQQIESSEKNVAFLRQQLIAERNLLDKGLITR 181

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             +   E+ +  +    +  I   +  L  ++      +      +  + + + Q +   
Sbjct: 182 PQVVASEQNLANA----QNQIESLRAQLVQLSSQALNTDFSQEQRVTVVRQRIAQEEIRL 237

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-----VPHSKLT 328
                +  I      +  I SP  G +V   S +         PL K+     V  +   
Sbjct: 238 EQLREQYQI------KSAITSPHDGVVVEVLSST-GTVVGMGTPLFKLKNELQVAENGKV 290

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
                V  +  + +K G  A V             KA +  +      Q  
Sbjct: 291 RGVLYVPSQDGKKIKVGMEALVVPSTVKPQEYGYMKAKVTYVSAFPVTQQG 341


>gi|260768057|ref|ZP_05876991.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio furnissii CIP 102972]
 gi|260616087|gb|EEX41272.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio furnissii CIP 102972]
          Length = 399

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 47/365 (12%), Positives = 107/365 (29%), Gaps = 61/365 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E+     GII +  V +   + QG  L+  +D +                  +  +++A 
Sbjct: 66  EVTPAVGGIIARVSVVDTQYVNQGDVLVQIDDTD----------------ARLALKQAAA 109

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D                                 +    + S   + +     + +   +
Sbjct: 110 DL-------------------------------ALAERRVRSYLANDEGLTAMVEAQEAS 138

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
               E +    +A  +  + DLT  ++L    +VS  ++   +    ++   L       
Sbjct: 139 EQRAEAQLKAAQADFARAKIDLTRREDLVRSGSVSGEEVTNAKTGYQQAQANLNAAKAAM 198

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                             A           +N        ++    +   ++  I +PI+
Sbjct: 199 AQAQATKLSTIGSQKANAALTDNTTV----ENNPEVLLAKARFEQAKVDLDRTVIRAPIS 254

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-A 356
           G I   Q        Q   PLM +VP +   Y+ A     ++++VK G   T+    Y  
Sbjct: 255 GIIAKRQV-QVGRRVQVGMPLMTVVPINS-IYVDANFKEVELRNVKVGQPVTLTADIYGD 312

Query: 357 DIREKKF-------KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           D+  +               + P  +   N ++  +   V +++       + +++    
Sbjct: 313 DVTYRGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPVRIELDPTDLQSHPLQVGLSM 372

Query: 410 PAEVL 414
              V 
Sbjct: 373 VVTVD 377


>gi|15641421|ref|NP_231053.1| multidrug resistance protein VceA [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121727555|ref|ZP_01680667.1| multidrug resistance protein VceA [Vibrio cholerae V52]
 gi|153821315|ref|ZP_01973982.1| multidrug resistance protein VceA [Vibrio cholerae B33]
 gi|183179393|ref|ZP_02957604.1| multidrug resistance protein VceA [Vibrio cholerae MZO-3]
 gi|227081581|ref|YP_002810132.1| multidrug resistance protein VceA [Vibrio cholerae M66-2]
 gi|298498511|ref|ZP_07008318.1| multidrug resistance protein VceA [Vibrio cholerae MAK 757]
 gi|9655906|gb|AAF94567.1| multidrug resistance protein VceA [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121630139|gb|EAX62542.1| multidrug resistance protein VceA [Vibrio cholerae V52]
 gi|126521133|gb|EAZ78356.1| multidrug resistance protein VceA [Vibrio cholerae B33]
 gi|183012804|gb|EDT88104.1| multidrug resistance protein VceA [Vibrio cholerae MZO-3]
 gi|227009469|gb|ACP05681.1| multidrug resistance protein VceA [Vibrio cholerae M66-2]
 gi|227013325|gb|ACP09535.1| multidrug resistance protein VceA [Vibrio cholerae O395]
 gi|297542844|gb|EFH78894.1| multidrug resistance protein VceA [Vibrio cholerae MAK 757]
          Length = 406

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 49/378 (12%), Positives = 104/378 (27%), Gaps = 63/378 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E+     GII +  V +   + QG  L+  +D +    +   +  +   +  + +  +  
Sbjct: 73  EVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLAND 132

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + L+                                                 + +   N
Sbjct: 133 EGLS-----------------------------------------------AMVEAQEAN 145

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              ++ +    +A     + DL+  ++L    +VS  +L   +    ++   L       
Sbjct: 146 EQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAM 205

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                             A            +        ++    +   E+  I +PI+
Sbjct: 206 AQAQATKLSTIGSQKANAALTDNTTV----DSNPEVLLAKARYEQAKIDLERTVIRAPIS 261

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q        Q   PLM +VP     Y+ A     +++ VK G   T+    Y D
Sbjct: 262 GIVAKRQV-QVGRRVQVGMPLMTVVPTDH-IYVDANFKEVELRDVKVGQPVTLTADLYGD 319

Query: 358 IRE--KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN---G--F 409
                              S       T  + +V+ ++   +     +++      G   
Sbjct: 320 DVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSM 379

Query: 410 PAEVLF--TAKNTTLAQE 425
            A +    T    TL Q 
Sbjct: 380 VATIDTAGTTDPQTLVQY 397


>gi|329963853|ref|ZP_08301195.1| auxiliary transport protein, membrane fusion protein family protein
           [Bacteroides fluxus YIT 12057]
 gi|328527106|gb|EGF54112.1| auxiliary transport protein, membrane fusion protein family protein
           [Bacteroides fluxus YIT 12057]
          Length = 363

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 108/360 (30%), Gaps = 79/360 (21%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IKK       +I +G  LL  +D          K+ +      +    +    +   
Sbjct: 75  SGYIKKIYFTEHQEIHKGDTLLVLDD-------REYKIRVMEAEAALKDALAGATVIGAT 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +      +  + +                                           
Sbjct: 128 LQTTQTTASVYDASIAE------------------------------------------- 144

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               +   L+  +KD    +NL ++ A +   L Q E     +  +L     +QK  L  
Sbjct: 145 ----IEIRLAKLEKDRQRYQNLVKRKAATPIQLEQIETEYEATHKKLEAVKRQQKAALSG 200

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +N               E+S   E  +       + L +         + +P  G  +  
Sbjct: 201 VN---------------EVSHRRENTEAAIQRATAALEMARLNLSYTVVTAPCDGK-LGR 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKK 362
           ++     +    Q +  I+P ++   I A     QI++++ G   T+     +D +   K
Sbjct: 245 RTLEEGQFITAGQTITYILPDTQKWII-ANYKETQIENLRPGQEVTITVDAVSDRKFTGK 303

Query: 363 FKAIIE------KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             AI         + P  +   N ++ Q+   V +  TDL+  DN  +L  G    V   
Sbjct: 304 ITAISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTDLSKEDNE-KLAAGMMVIVKVK 362


>gi|92116236|ref|YP_575965.1| secretion protein HlyD [Nitrobacter hamburgensis X14]
 gi|91799130|gb|ABE61505.1| secretion protein HlyD [Nitrobacter hamburgensis X14]
          Length = 388

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 92/299 (30%), Gaps = 28/299 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +E Q +             F + +      L        ++  N  +    S+L +  ++
Sbjct: 98  KEGQHVKTGDPLFEIDPAPFRFAVQQAQAKLNDATIEYNTLKSNLANYAQSSALAQESIN 157

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q+D+     L + N  SQ DL+     + ++    +  + +  +    +    D    
Sbjct: 158 VKQRDVDRKTALAKNNVGSQLDLDNSLSALVQAEGINQILLQQISSTRNKLLGDPDLPLA 217

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +F +Y+ +    L   QR  A                 + +PI G      +     +  
Sbjct: 218 KFPDYV-QARAALADAQRNLA--------------NTELRAPIDGIATQVDNIQLGRFVA 262

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              P+  +V      ++ A        +V  G    +    + D     FK  +  + P 
Sbjct: 263 AGTPVFSVVDLGHP-WVDANPKESDFTYVAVGQPVDLSIDSFPDH---VFKGTVGSLSPG 318

Query: 374 ISQQ----DNNLQTQEYYEVILKITDLAFSDNN----IELRNGFPAEVLFTA-KNTTLA 423
                        T  + +V+ +I    + D +      L++G    V        TLA
Sbjct: 319 TGATFAILPPQNATGNFVKVVQRIPVRIYFDKDDPMVARLKSGMSVYVSIDTHHRRTLA 377



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 13/187 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                V I    SG I    V+ G  +  G PL   +       +   +  + +     +
Sbjct: 77  VGAQKVLITPEVSGKIDSVTVKEGQHVKTGDPLFEIDPAPFRFAVQQAQAKLNDATIEYN 136

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           T KS L        + +++   ++  +     L K +       +  +S++ ++  +   
Sbjct: 137 TLKSNLANYAQSSALAQESINVKQRDVDRKTALAKNNVGSQLDLDNSLSALVQAEGINQI 196

Query: 170 RMRSIYLNRLDLENKSS----------LLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQ 218
            ++ I   R  L                 RA L+  Q++L   +         +Q D  Q
Sbjct: 197 LLQQISSTRNKLLGDPDLPLAKFPDYVQARAALADAQRNLANTELRAPIDGIATQVDNIQ 256

Query: 219 QERIVYK 225
             R V  
Sbjct: 257 LGRFVAA 263


>gi|51892113|ref|YP_074804.1| hypothetical protein STH975 [Symbiobacterium thermophilum IAM
           14863]
 gi|51855802|dbj|BAD39960.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 517

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 54/406 (13%), Positives = 126/406 (31%), Gaps = 54/406 (13%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V + G +     V E+++PF+      +V  G ++  G  L   +D +    +  ++  +
Sbjct: 52  VIAPGVLEATG-VHEVRAPFTTKAVTLKVGIGERVTAGQVLAVLDDADLALQVSAQEAQV 110

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             +   + + +        +   L++       QLL    +  S   +            
Sbjct: 111 ARMESTLASLRLQQQEAPLQ---LDQRLAQARAQLLQAEDQLASVMRQDDALRTRLEQAR 167

Query: 164 LKMKLTRMRSIYLNRLD----------------------LENKSSLLRALLSSHQKDLTM 201
           + +   + RS                             L  K    R+      +    
Sbjct: 168 VNLTTLQNRSAEGAERVAAARAALLEAEEAYKADPGNPALRAKYEQARSAYDEALRQSQQ 227

Query: 202 MKNLFEKNAVSQ-NDLNQQERIVYKSTL------ELRENIHEQKNMLRHINELYDEANLE 254
                     +  ++L   E    + +       +L  +  E   +   + E+  E+   
Sbjct: 228 AAEQAAAQLRAAYDELAAAEADYARVSGDNPVAVQLAASQVEAARIALQLAEMEAESGGA 287

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A  ++    +L   + + A    KL   +       + +P++GT++   +      AQ+
Sbjct: 288 LAEQVRAAEIELAAARTSLAAMREKLAQAQ-------LTAPVSGTVLAVAA-QDGMPAQE 339

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           +Q L+ I  +  +  ++A+V    I  V+     +V          + F   + ++    
Sbjct: 340 TQVLLTIG-NLDVLKVKAQVDELDIGKVRPEQPLSV---ETNGTPGELFHGRVTRVAA-- 393

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             Q        ++ V     +   ++    LR G  AEV       
Sbjct: 394 --QATAAGGSPFFVV-----EGEVANREGLLRAGLNAEVTIATAER 432


>gi|119485965|ref|ZP_01620027.1| hypothetical protein L8106_05575 [Lyngbya sp. PCC 8106]
 gi|119456740|gb|EAW37868.1| hypothetical protein L8106_05575 [Lyngbya sp. PCC 8106]
          Length = 541

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 36/335 (10%), Positives = 106/335 (31%), Gaps = 45/335 (13%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            ++   SG +K+  V  G Q+  G P++  +  +    ++ +  ++++ R  ++T K+ L
Sbjct: 64  VLQPRVSGWVKQVYVRLGDQVSTGDPIMLIDPSQQQANLESRLAAVESRRAQLETAKANL 123

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D    +   L+    S + Q  +      +  ++               +   ++     
Sbjct: 124 DAQRAELRRLQAEL-SYQSQEANLRDAEQTLAAERQEKQRIEYELEFLSEAANLKDAQEQ 182

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL------- 230
                 +      +           + L+E+  VS    +Q+ R + ++   L       
Sbjct: 183 LEAARRERDRRAIVKEERDSAFERYEKLWEEGVVSSEAYDQRLREIREAEAALAQQEDTV 242

Query: 231 ---------------------RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
                                +  I  Q++ +       + A   F   +  ++  +   
Sbjct: 243 RSAQAQVVAAQQDLERQISTLQAQISTQQSRIEAARARVESAGQAFERQVATLNAQIASQ 302

Query: 270 QRTFADEMSKLTILEKTREQK--------------TILSPIAGTIVYNQSFSSSNYAQQS 315
           ++    + S++  L +  +Q               ++ +PI+G +         ++    
Sbjct: 303 EKVIEAQQSEVNRLGREIQQAQADATGQQVELDYYSLEAPISGIVGELPV-KVGDFVDSQ 361

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
             +  I   +    +   V   ++  ++ G    +
Sbjct: 362 TTVTSIR-QNDQLEVNIDVPVGRLSQIRVGTPVEL 395


>gi|227820362|ref|YP_002824333.1| multidrug resistance protein A [Sinorhizobium fredii NGR234]
 gi|227339361|gb|ACP23580.1| multidrug resistance protein A [Sinorhizobium fredii NGR234]
          Length = 362

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/417 (11%), Positives = 119/417 (28%), Gaps = 83/417 (19%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +    P  +  + L     ++    W+       S +S+       +V  +    +G + 
Sbjct: 19  MAGPKPKKIVGLALCLGAVVVVAGGWA-WAR-SGSAASTDNAYVRGDVTALAPKVAGYVT 76

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V++   +  G  L   +D              ++ R  +    + ++    +   ++
Sbjct: 77  AVAVKDNQAVRAGDVLFRIDD--------------RDYRARLAQAVANVEAAEARLINVD 122

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E                           +  +L  +           LDL  K+   
Sbjct: 123 AETE---------------------------LQHALIRQAEAQGRAAAAELDLATKAYER 155

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R             + L   N +SQ  +++ +    ++   +       +   + I  L 
Sbjct: 156 R-------------RELIRSNTISQAHVDESDAARSRAEASVAAAAATVEAQRQRIAVLA 202

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +     A   +  +                  + E   +   + +P+ G ++ N+    
Sbjct: 203 AQREAAVAAVAQAEAAR---------------DLAEIDLDSTVVRAPV-GGVIGNRQVRI 246

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
             +      L+ IVP   +  + A     Q++H++ G  A +    Y          +++
Sbjct: 247 GRFVAPGAALLDIVPVDDVWVV-ANFKETQVEHIRPGQRARITIDGYPA---GALDGVVD 302

Query: 369 KIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNI--ELRNGFPAEVLFTAK 418
              P           +  T  +  V+ ++   +  + N +   L  G  A V     
Sbjct: 303 SFAPGSGSAFSLLPPDNATGNFVRVVQRVPVKIRLAGNPLAGRLVPGLSARVEIVQG 359


>gi|184158210|ref|YP_001846549.1| multidrug resistance efflux pump [Acinetobacter baumannii ACICU]
 gi|332875783|ref|ZP_08443581.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6014059]
 gi|183209804|gb|ACC57202.1| Multidrug resistance efflux pump [Acinetobacter baumannii ACICU]
 gi|332736009|gb|EGJ67038.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6014059]
          Length = 362

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 63/431 (14%), Positives = 129/431 (29%), Gaps = 90/431 (20%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGL--ITWS---ILLPIEISVSSSGEILNEDNVV 57
           H M ++ K      LK+  ++ I  II L  I W    I LP  I  +    +  E +  
Sbjct: 9   HSMTESPKLTKMQYLKKHWVMVIAFIIVLVSILWILKVIFLPSSIVKTDDARVDVEYS-- 66

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I    SG I++  +++   + +G  L                         ID      
Sbjct: 67  TIAPKVSGNIEEIYIKDHQTVKKGQLL-----------------------ARIDAR---- 99

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                            +  L +    Y    + +    ++   +   ++          
Sbjct: 100 ---------------DYQAALAEAESNYAKAQADLNEAMLAVERQPTVIR---------- 134

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             + E +   + A +   + +    + L    A S+    Q +  + +   +L  +  + 
Sbjct: 135 --ETEAQLRKVEAGIKLTKDNTARYEQLQALGAESRLITQQSKTTLTEQYADLDSSKEKV 192

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +    +N+   +   + A   +  +                    +       I +PI 
Sbjct: 193 IDAQYQLNQYKIQVQAKQAALKQAQAAL---------------DKAKLNLSYTEIRAPID 237

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I   +S +  N+     PLM +VP     Y+ A     +++ +K G   TV    Y  
Sbjct: 238 GMI-GQKSANVGNFVGAGNPLMVVVPLD-QVYVEANFREIELKQIKIGQPVTVYVDAYN- 294

Query: 358 IREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIE----LRNGF 409
               + K +++   P      S       T  + +++ ++        N      LR G 
Sbjct: 295 ---VELKGVVDSFSPSTGAFFSPISATNATGNFTKIVQRLPLRIKLLENQPDIKLLRPGL 351

Query: 410 PAEVLFTAKNT 420
              V       
Sbjct: 352 SVVVSVDTTKK 362


>gi|163783128|ref|ZP_02178123.1| hypothetical protein HG1285_01095 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881808|gb|EDP75317.1| hypothetical protein HG1285_01095 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 362

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 113/357 (31%), Gaps = 59/357 (16%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I++   E G ++ +G PL   ED +    +   +  I  L   I+       FL  + 
Sbjct: 56  GRIEELYREEGDRVRKGEPLAKLEDQDYRLKLRELRNQIGRLDKEIEALILKAKFLREEI 115

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                         +  +      ++ K
Sbjct: 116 G-------------------------------------------KSIEVVEKEARAIQEK 132

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              LR  +   +KD    + LF K  V        +  +     E+     ++  +L   
Sbjct: 133 IESLRVKVGLLEKDRERFRKLFSKGVVPSRKFEDVDTALRSLKREIESLKAKRSAVLARK 192

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             L  +        + EI + +E  +R      SK   LE   ++  + SP+ G +V  +
Sbjct: 193 GVLRAKLKQ-----VGEIDKRIEALKRQKRALKSKEEDLENLLQETVLRSPVEGYVVK-R 246

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             S     +Q Q +   V      YI   +   +++ V++G    +       ++ +   
Sbjct: 247 FVSEGEVVRQGQFI-YAVYDPTDLYILVLLEETKLRGVREGNDVIISIDALPGVKYR--- 302

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLF 415
             +++I+   + +      ++   E+ +V   + I       +   LR G   EV  
Sbjct: 303 GKVKEINRATAAKFAVIPRDITAGEFTKVAQRIPIKVEITEGDKSLLRVGMGGEVAI 359


>gi|32812397|emb|CAD97585.1| putative hylD family protein [Clostridium beijerinckii]
          Length = 475

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 105/370 (28%), Gaps = 79/370 (21%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           IK+ +V+ G ++  G  L   +  +    I+  + +      +   E             
Sbjct: 93  IKEVRVKVGDKVKAGDILAVLDSGDLEKDIEQAEATTAANEANNKME------------- 139

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                       L+   K +     ++N  ++S  +                 + E   +
Sbjct: 140 ------------LNAAKKEYENTLYLYNNNLNSEIK-----------------NAEEAVN 170

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +  L   +      K L E   +S+ +L Q++     +  E  +     +N      +
Sbjct: 171 SAKLSLEDKENIYEYNKMLLESGEISKQELKQKKIDFENAKSEYDKAAVALENAKVKALQ 230

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             D A   +            QN      E   L   +   E+  I +PI GT+      
Sbjct: 231 ELDTAKNNYEK---------AQNAANNNSERIALEKQQSNLEKCQIKAPIDGTV-----T 276

Query: 307 SSSNYAQ-QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           S S  A       +  V       I A +       +K G  A +R     D        
Sbjct: 277 SVSAVAGDPGSGNLFRVEDLDNIEINASIKEIDRASIKVGQKAEIRTDSTGDA---VIYG 333

Query: 366 IIEKIDPIISQQDNNLQTQEY--------------YEVILKITDLAFSDNNIELRNGFPA 411
            +  I P  +  +  + T++               +E  +KI++      N  +  G   
Sbjct: 334 EVVSISPTANTSEIPINTEKSQLTNTSTNTSTEEGFEAKIKISEP-----NESIYVGMST 388

Query: 412 EVLFTAKNTT 421
                    +
Sbjct: 389 RANIILSEKS 398


>gi|107026951|ref|YP_624462.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116691852|ref|YP_837385.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           HI2424]
 gi|105896325|gb|ABF79489.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116649852|gb|ABK10492.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           HI2424]
          Length = 364

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/371 (13%), Positives = 106/371 (28%), Gaps = 75/371 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    +G + K  V +  ++  G  L+  +  +           +      +D
Sbjct: 62  VGGDVTVLAPKVNGFVDKILVTDNQRVKAGDVLVQLDARDYDA-------KLAQASAEVD 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           + +SA+  L  K                                      + L+  +   
Sbjct: 115 SARSAVTELEAK--------------------------------------QQLQFAVIGQ 136

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +   N    E         L+    D    + L + +AVS   + + +    K+   + 
Sbjct: 137 HAADKNASSAE---------LTRAASDRVRYRELVKSDAVSNQIVERADADYSKAGAAVE 187

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   +      ++   +     E  T
Sbjct: 188 RSDAALLASKRQLDVL---------------GAQLADARARVNTALAAQRVAALNVEYTT 232

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +  N++      A    PL+ +VP S   +I A     Q++ ++ G    V 
Sbjct: 233 IRSPVDGYV-GNRTGRVGMLANVGVPLLTVVPASG-LWIDANFKEDQLRKMRAGDRVDVA 290

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN----IELRN 407
               +     +  ++        S       T  + +++ ++      D        LR 
Sbjct: 291 LDASSTRLHGRVDSLAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGIEHVLRP 350

Query: 408 GFPAEVLFTAK 418
           G  A V     
Sbjct: 351 GLSAVVTVHTD 361


>gi|153826999|ref|ZP_01979666.1| multidrug resistance protein VceA [Vibrio cholerae MZO-2]
 gi|254226127|ref|ZP_04919724.1| multidrug resistance protein VceA [Vibrio cholerae V51]
 gi|125621362|gb|EAZ49699.1| multidrug resistance protein VceA [Vibrio cholerae V51]
 gi|149739160|gb|EDM53446.1| multidrug resistance protein VceA [Vibrio cholerae MZO-2]
          Length = 406

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/378 (12%), Positives = 104/378 (27%), Gaps = 63/378 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E+     GII +  V +   + QG  L+  +D +    +   +  +   +  + +  +  
Sbjct: 73  EVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLAND 132

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + L+                                                 + +   N
Sbjct: 133 EGLS-----------------------------------------------AMVEAQEAN 145

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              ++ +    +A     + DL+  ++L    +VS  +L   +    ++   L       
Sbjct: 146 EQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAM 205

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                             A            +        ++    +   E+  I +PI+
Sbjct: 206 AQAQATKLSTIGSQKANAALTDNTTV----DSNPEVLLAKARYEQAKIDLERTVIRAPIS 261

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q        Q   PLM +VP     Y+ A     +++ VK G   T+    Y D
Sbjct: 262 GIVAKRQV-QVGRRVQVGMPLMTVVPTDH-IYVDANFKEVELRDVKVGQPVTLTADLYGD 319

Query: 358 IRE--KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN---G--F 409
                              S       T  + +V+ ++   +     +++      G   
Sbjct: 320 EVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSM 379

Query: 410 PAEVLF--TAKNTTLAQE 425
            A +    T    TL Q 
Sbjct: 380 VATIDTAGTTDPQTLVQY 397


>gi|312878303|ref|ZP_07738221.1| secretion protein HlyD family protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311794921|gb|EFR11332.1| secretion protein HlyD family protein [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 365

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/401 (13%), Positives = 130/401 (32%), Gaps = 47/401 (11%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           K + L S   I   +        +  + SS     E   +++ S  +G ++K  VE GS+
Sbjct: 9   KLVLLASFCIIFLFLLTGCKAKNDEDIYSS---TVEVKSIDVNSEIAGRVEKVYVEEGSK 65

Query: 78  ILQGTPLLTFED--IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           + +G  +   +   +E    + L  + +  +   I  E   +  L               
Sbjct: 66  VKRGDVIAKLDSGILEIQKNLALYNLEVAKISSEIAKENLEIAKL--------------- 110

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                   KY     K   Y +  +  ++            N   L      L+A+  S+
Sbjct: 111 --------KYALVSKKPSKYQLEQLKENIFQLKELKAGNEKNISLLRQAIEDLKAVRVSN 162

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            + +  +  L       +  LN  E        ++     + + +        D++    
Sbjct: 163 PEMIKALTEL-------KVQLNSLEAQNESLAHQINSLEVQLQMVKNETVMPEDKSIYAI 215

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           +  + + +          A+    L + E+  ++ TI+SP  G I   +      +    
Sbjct: 216 SVEIAQKNYSQAMEYVKIAE--GNLKLCEENLKKATIISPADGII-SIKGVEEGQFIGPG 272

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK-AIIEKIDPII 374
             + +I       Y++  V   ++  V  G   ++           +     I  I    
Sbjct: 273 SFVAQI--SLAQYYLKIYVPSTKLGKVNIGKEVSI------ASESGQIAYGKIVYISDKA 324

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                N++T++  + ++ +  ++ + N   L+ G   +V+ 
Sbjct: 325 EFTPRNVETKDEKQKMVFMVKISITKNKEILKPGMIVDVIL 365


>gi|218659425|ref|ZP_03515355.1| protein secretion protein, HlyD family [Rhizobium etli IE4771]
          Length = 76

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 31/67 (46%)

Query: 10 KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
          KR+    +  +  LSI  + G+  W+    +  +V   G ++ + +V +I+ P  GI+ K
Sbjct: 10 KRSLNRHVAVVGALSIALVCGIGGWAATTELSSAVIGEGVVIVDGDVKKIQHPTGGIVSK 69

Query: 70 FQVENGS 76
            V    
Sbjct: 70 LLVAEND 76


>gi|255009591|ref|ZP_05281717.1| putative ABC transport system, lipoprotein [Bacteroides fragilis
           3_1_12]
 gi|313147370|ref|ZP_07809563.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136137|gb|EFR53497.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 298

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 92/247 (37%), Gaps = 33/247 (13%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         M+S+   R D+  + +  R  +++ Q++   ++NL +  A +Q  L+ 
Sbjct: 71  QLYLKKLQLQASMKSVESQRPDVNKQIAATRQQIATAQREKKRVENLLKAGAANQKQLDD 130

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  V     +L   +   +N    + E      ++ A                      
Sbjct: 131 WDAQVALLERQLAAQMSSLQNSTNSLTEQGSSVAIQVAQ--------------------- 169

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E    +  I+SPI+GT++  +   +   A   +PL K V      Y+RA +T +Q
Sbjct: 170 ----VEDQLAKCHIVSPISGTVLA-KYAEAGELAAVGKPLFK-VADVDHMYLRAYITSEQ 223

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKI 393
           +  VK G   TV F  Y     K++  ++  I          + T+E      Y V + +
Sbjct: 224 LSQVKIGNRVTV-FSDYGGNERKEYPGVVSWISDRSEFTPKTILTKEERANLVYAVKITV 282

Query: 394 TDLAFSD 400
            +     
Sbjct: 283 ENDGLLK 289


>gi|197119007|ref|YP_002139434.1| RND family multidrug resistance efflux pump membrane fusion protein
           EmrA [Geobacter bemidjiensis Bem]
 gi|197088367|gb|ACH39638.1| multidrug resistance efflux pump, RND family, membrane fusion
           protein EmrA [Geobacter bemidjiensis Bem]
          Length = 366

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 90/312 (28%), Gaps = 24/312 (7%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +S +  + ++   L       + Q +             +    +S   S++M       
Sbjct: 65  ESHVHSIASRVPGLVHRVAVVDNQFVRKGDLLVELDPSDYRARENSAAASVEMAKNETSG 124

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
            Y           L  A L     DL   + L+ K  + +  L +Q      + ++L+E 
Sbjct: 125 DYAQVESARANIGLAAARLEQANLDLRRAEALYAKEVIPREQLERQRTAHRVAQMQLKEA 184

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              ++     I                             A++ ++L           I+
Sbjct: 185 QEAERKAKAMIG-----------------ISGTGSKDARVAEKQAELETAHLNLSYTRIV 227

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +         NY Q  Q LM +VP     +I A     Q+  V+ G        
Sbjct: 228 APGDGFVTRKGV-EPGNYVQPGQALMAVVPLEGA-WITANYKESQLAKVRPGQNVEFTVD 285

Query: 354 HYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNG 408
            Y       K ++I+       S       T  Y +V     ++I     SD    LR G
Sbjct: 286 TYPGRTFTGKVESIMAGTGAAFSLLPPENATGNYVKVTQRIPVRIAIDRRSDPEHLLRVG 345

Query: 409 FPAEVLFTAKNT 420
                      T
Sbjct: 346 MSVVPTILTGQT 357



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 63/186 (33%), Gaps = 18/186 (9%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNE-----DNVVEI 59
             + L +     +  + ++ I  ++G+  W         V S   I  +      +V  I
Sbjct: 21  ERRGLNKRQRGGIVLLVIIVIGALLGVHRW---------VRSKTHIETDNAFIESHVHSI 71

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
            S   G++ +  V +   + +G  L+  +  +     +    S++  +     + + ++ 
Sbjct: 72  ASRVPGLVHRVAVVDNQFVRKGDLLVELDPSDYRARENSAAASVEMAKNETSGDYAQVES 131

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                 +      +R EQ    L +  +  +K          +    ++ +M+       
Sbjct: 132 ARANIGLAA----ARLEQANLDLRRAEALYAKEVIPREQLERQRTAHRVAQMQLKEAQEA 187

Query: 180 DLENKS 185
           + + K+
Sbjct: 188 ERKAKA 193


>gi|116621741|ref|YP_823897.1| secretion protein HlyD family protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116224903|gb|ABJ83612.1| secretion protein HlyD family protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 448

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/415 (10%), Positives = 122/415 (29%), Gaps = 49/415 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +       + L+ ++ I GL+ W      E +  +    + + +   + +  +G +    
Sbjct: 63  HPVRKFILIALVLVLAIGGLLWWLHARNFESTDDA----IVDGHTSGLAARVAGTVIAVY 118

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE    +  G  ++  +  +    +   +  ++  +     E  ++              
Sbjct: 119 VEENQFVKAGQVVVDLDPRDYEAAVASARGQLQQAQAQQQAELPSVPVTRVTS------- 171

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                                    I++   S+      + +   N     ++    +A 
Sbjct: 172 ----------------------QTNIANAGSSIASAEAGVAAAQRNYEAALDRVREAQAT 209

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR----------ENIHEQKNML 241
            +  Q D+   + L EK+ V +   +Q       S   +           + + + +  L
Sbjct: 210 AAKAQSDVDRYRPLAEKDEVPREQFDQVVATATSSAAAVAANQAGAQAALKQVDQARAQL 269

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
               +   E        +     ++     +     ++L           I +P++G + 
Sbjct: 270 AQARQTAGEVANNAPRQIAIQQANVRSRAGSAQMSRAQLEQALLNLSYCKIQTPVSGIVA 329

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +      +    Q ++ +V      ++ A     QI+ +  G +A +     A   + 
Sbjct: 330 R-RVAEIGQHVAPGQEVL-LVTRLDDLWVTANFRETQIRRMVAGQSARIHVDALAQDFDG 387

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAE 412
             +++      I S       T  + +V+ ++               LR G   E
Sbjct: 388 YVESMPAASGSITSLLPPENATGNFIKVVQRLPVRIRFKQGQNGLDRLRPGMSVE 442


>gi|317485856|ref|ZP_07944719.1| HlyD family secretion protein [Bilophila wadsworthia 3_1_6]
 gi|316922898|gb|EFV44121.1| HlyD family secretion protein [Bilophila wadsworthia 3_1_6]
          Length = 331

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 97/281 (34%), Gaps = 24/281 (8%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E+L     K +          +S     L+  +   R+  + +       S  +A+ ++ 
Sbjct: 69  ERLARLDAKPYEEVFDQAAAQLSMQEIELRKMVAGYRTEDIEQA--RATLSGAQAVYANA 126

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +L  ++ L ++NAVSQ  L++                    + L   N   ++  L  
Sbjct: 127 ASNLRRVERLRQQNAVSQQSLDEAR--------------ASYGDALSRRNAAREQLQLME 172

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           + Y  E   D+E+ +       ++L       +   + +P  G ++  +        Q  
Sbjct: 173 SGYRSE---DVERQKAAVEAARAELARATTNLQDTELFAPQDGVVLT-RVHEIGAVVQGG 228

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q +   V  +   +IRA VT   + +++ G    +      D   +     I  I P   
Sbjct: 229 QTV-YTVTLNNPVWIRAYVTQPNLGNIRPGQEVLLSIDATPDKTYR---GRIGFISPTAE 284

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                ++T+E    ++    +   D +  +R G P  V   
Sbjct: 285 FTPKTVETKEVRNDLVFRFRVIADDPDNVMRQGMPVTVTLR 325



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/137 (9%), Positives = 33/137 (24%), Gaps = 4/137 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G + +   E G  +  G  L   +     ++ D     +      +    +        
Sbjct: 51  GGRVTELFKEEGDAVKTGERLARLDAKPYEEVFDQAAAQLSMQEIELRKMVAGYRT---- 106

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D+ +        Q +      +    +      +   +SL             R     
Sbjct: 107 EDIEQARATLSGAQAVYANAASNLRRVERLRQQNAVSQQSLDEARASYGDALSRRNAARE 166

Query: 184 KSSLLRALLSSHQKDLT 200
           +  L+ +   S   +  
Sbjct: 167 QLQLMESGYRSEDVERQ 183


>gi|261753123|ref|ZP_05996832.1| LOW QUALITY PROTEIN: secretion protein HlyD family protein
           [Brucella suis bv. 3 str. 686]
 gi|261742876|gb|EEY30802.1| LOW QUALITY PROTEIN: secretion protein HlyD family protein
           [Brucella suis bv. 3 str. 686]
          Length = 368

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 90/289 (31%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 92  IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 151

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++   L     +  +   +I+ L          
Sbjct: 152 TMARVQKLHETRFVAQSELDNAQSALDQARARLAGADAQIASAKANISVL---------- 201

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                     +   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 202 -----EAQYNEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 255

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P     
Sbjct: 256 IAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAV 311

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++IT    +  + ++R G    V    +
Sbjct: 312 FSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDTR 360



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 65/257 (25%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +   +  +    +D     +       +
Sbjct: 60  VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 119

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 120 RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSALDQ 179

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+          +   S+L A  +        ++ L    A                
Sbjct: 180 ARARLAGADAQIASAKANISVLEAQYNEAASSTKSLE-LARDKAARDLSFTSLRAPFDGV 238

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +     + I  L     L      KE      +   T    +  +   +  
Sbjct: 239 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETQLAHIKVGETAHIYVDAIDGTKFD 298

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 299 GKVASI-APASGAVFSL 314


>gi|322833683|ref|YP_004213710.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
 gi|321168884|gb|ADW74583.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
          Length = 344

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/405 (12%), Positives = 120/405 (29%), Gaps = 82/405 (20%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           + ++   L + + +I L+  ++ +  + ++  + +     +   +    SG I    V++
Sbjct: 5   SPVRLSWLCAAVVVIFLVVIALWILGKSTLPVTDDAFVSADSTLVAPRISGTIADVYVQD 64

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              +  G  L   +D +  + +         L    + E +    L              
Sbjct: 65  NQMVKAGDVLARIDDRDYRNAV---------LTAEANLETANAQML-------------- 101

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                                       SL  +L + +   L    L N  +   A ++ 
Sbjct: 102 ----------------------------SLTAQLAKQQQTILQARALVNADA---ASIAY 130

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++     K L +         +       +S   LR  +  Q++ +         A L 
Sbjct: 131 ARQSADRYKRLLQNG-------SGTADARDESDANLRSKLAAQQSDMA--------AALG 175

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
               +  +  +  + +       + L   +       I +P+ G +V  +S     Y   
Sbjct: 176 AEKQVDVLKAEQAEAKAAIDSAATALAQAKLNLSYTEITAPVDG-VVGQRSLRIGGYVAA 234

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              ++ +VP      +   +  +    V+      ++      +     K  ++ I P  
Sbjct: 235 GARVLAVVPLKNAYIVANYLETQL-GDVQPHQPVEIKVDALPGVT---LKGKVDSISPAT 290

Query: 375 ----SQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPA 411
               S    +  T  Y +V+ ++      D+N      L+ G   
Sbjct: 291 GVTFSPISPDNATGNYTKVVQRLAVKIVLDSNQPDVKRLKVGMSV 335


>gi|300023474|ref|YP_003756085.1| secretion protein HlyD [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525295|gb|ADJ23764.1| secretion protein HlyD family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 360

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/382 (13%), Positives = 117/382 (30%), Gaps = 78/382 (20%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            +  +E   ++ G I  +   V + S   G I +  V+   ++ +G  L+  +D E    
Sbjct: 56  AVTRVEWLAAAPGRIEPKSGTVRVGSALLGRIAEVAVKQNDKVEEGELLIRLDDDEARAR 115

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   +  + + +                                          ++  + 
Sbjct: 116 LQAAETEVASRK--------------------------------------RERDAQPLDK 137

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
               +  +        R +   R +LE +    R    + Q+ +               D
Sbjct: 138 ARDELREAEDNVFATERELTNARFELEYELQARREGNGTDQRVVH-----ARDGLAKAKD 192

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
             Q ER  Y +  + + NI     +   +                               
Sbjct: 193 KLQDERSAY-AKAQAKSNIPAPNRLESALQAA---------------------------- 223

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             S + + E   E+  IL+P++GT++   + +    A      + ++    +  ++A+V 
Sbjct: 224 -RSDVAVAEALLEKTRILAPVSGTVLQLPAKAGEMVAPSPDQTLAVLGDMSVVRLKAEVD 282

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              +  +K G    V+   Y     K+F+  + ++ P ++     L+      V +++  
Sbjct: 283 EIDVSKIKVGGKVVVKSNAYP---GKEFEGTVAELAPSLTSPQFALRGARR-PVDVEVLP 338

Query: 396 LAF-SDNNIELRNGFPAEVLFT 416
           +      N  L  G  A+  F 
Sbjct: 339 VTIDLQGNPPLLPGMRADAFFK 360


>gi|239504250|ref|ZP_04663560.1| multidrug resistance efflux pump [Acinetobacter baumannii AB900]
          Length = 362

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 62/431 (14%), Positives = 129/431 (29%), Gaps = 90/431 (20%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGL--ITWS---ILLPIEISVSSSGEILNEDNVV 57
           H M ++ K      LK+  ++ I  II L  I W    I LP  +  +    +  E +  
Sbjct: 9   HSMTESPKLTKMQYLKKHWVMVIAFIIVLVSILWILKVIFLPSSVVKTDDARVDVEYS-- 66

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I    SG I++  +++   + +G  L                         ID      
Sbjct: 67  TIAPKVSGNIEEIYIKDHQTVKKGQLL-----------------------ARIDAR---- 99

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                            +  L +    Y    + +    ++   +   ++          
Sbjct: 100 ---------------DYQAALAEAESNYAKAQADLNEAMLAVERQPTVIR---------- 134

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             + E +   + A +   + +    + L    A S+    Q +  + +   +L  +  + 
Sbjct: 135 --ETEAQLRKVEAGIKLTKDNTARYEQLQALGAESRLITQQSKTTLTEQYADLDSSKEKV 192

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +    +N+   +   + A   +  +                    +       I +PI 
Sbjct: 193 IDAQYQLNQYKIQVQAKQAALKQAQAAL---------------DKAKLNLSYTEIRAPID 237

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I   +S +  N+     PLM +VP     Y+ A     +++ +K G   TV    Y  
Sbjct: 238 GMI-GQKSANVGNFVGAGNPLMVVVPLD-QVYVEANFREIELKQIKIGQPVTVYVDAYN- 294

Query: 358 IREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIE----LRNGF 409
               + K +++   P      S       T  + +++ ++        N      LR G 
Sbjct: 295 ---VELKGVVDSFSPSTGAFFSPISATNATGNFTKIVQRLPLRIKLLENQPDIKLLRPGL 351

Query: 410 PAEVLFTAKNT 420
              V       
Sbjct: 352 SVVVSVDTTKK 362


>gi|158321632|ref|YP_001514139.1| RND family efflux transporter MFP subunit [Alkaliphilus oremlandii
           OhILAs]
 gi|158141831|gb|ABW20143.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
           oremlandii OhILAs]
          Length = 406

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 58/345 (16%), Positives = 116/345 (33%), Gaps = 58/345 (16%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD-----------F 141
           T   DLK+V ++     ++ E + +  L N+   + K   + E  ++             
Sbjct: 26  TSSTDLKEVQVEEKYIPVEIETAEIASLGNRTRFMGKVAANEELAVIPKAMGIVTSINVE 85

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN-------KSSLLRALLSS 194
           LG      S +F      + +S++     +     +    EN          L +  + +
Sbjct: 86  LGDVVEEGSVLFTIEQGDISKSVEQAANAVELANRSVSQAENGLKTASVNYELSKEKIEN 145

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
              +L   K L+E+ A+S++ L Q E       L++             I     +A + 
Sbjct: 146 AMLNLERTKKLYEEGAISKSQLEQAELAASDKNLDV-------------IKGQVTQAEIS 192

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
           +   L      L Q + ++   MS             + +P++GTI              
Sbjct: 193 YQQALN----QLRQAEISYEQAMS-------GLNNTVVQAPMSGTIASLNV-KEGQIIAN 240

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            Q    IV  +   Y++  V    I  ++ G  A V      D +     + I  I P +
Sbjct: 241 GQVAATIV-DTDKVYVQMNVVENMINKLQVGQEAEVHISSAGDTK---ITSTISYIAPTV 296

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             ++        Y V + I +L     + +++ G   E++     
Sbjct: 297 DPRNQL------YPVKIYIDNL-----DNKIKPGMSGEIILNIDK 330



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 61/170 (35%), Gaps = 1/170 (0%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  +       G++   + +  I     GI+    VE G  + +G+ L T E  + + 
Sbjct: 48  AEIASLGNRTRFMGKVAANEELAVI-PKAMGIVTSINVELGDVVEEGSVLFTIEQGDISK 106

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            ++    +++     +   ++ L   +  Y++ ++  E+    L      Y         
Sbjct: 107 SVEQAANAVELANRSVSQAENGLKTASVNYELSKEKIENAMLNLERTKKLYEEGAISKSQ 166

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  S K        +    +  +   + LR    S+++ ++ + N
Sbjct: 167 LEQAELAASDKNLDVIKGQVTQAEISYQQALNQLRQAEISYEQAMSGLNN 216


>gi|269959317|ref|ZP_06173701.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269836019|gb|EEZ90094.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 337

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 88/300 (29%), Gaps = 29/300 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V +  + S+   L     +      ++    +     +L    T+     +     +   
Sbjct: 55  VEDNQWVSKGAPLFSIDDEDFVANQEIAKSALDVAKAALTANQTKTEMQLVKIEQAKQGI 114

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A       +   +  L +K +VS+N    Q     ++   L           + ++
Sbjct: 115 HSANANAEHQAAEFKRLSRLVQKQSVSKNQFEAQRTRSIEANSNLETAKLALAAEQKQLD 174

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L  E     A   +                 + L ++    E+  + +P  G +   Q 
Sbjct: 175 ALVTEKMQLIAQRKQ---------------AEANLRLVNIALERTIVRAPFDGYVADRQV 219

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                + Q    L+ +VP     +I A     Q+++V +G    V    + D        
Sbjct: 220 -QVGKFVQPGMGLIVMVP--DYVWIEANFKETQLENVAQGQDVEVVLDMFPDH---PLHG 273

Query: 366 IIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTA 417
            +  I P    Q         T  + +V+    ++I      +    +  G  AEV    
Sbjct: 274 RVSSITPATGAQFSLLPPQNATGNFVKVVQRVPVRIELDIPQELKQRIYPGLSAEVSIET 333



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 53/155 (34%), Gaps = 2/155 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  I     G + +  VE+   + +G PL + +D +     ++ K ++   +  + 
Sbjct: 35  VHSDVTAISPEVGGQVSQLFVEDNQWVSKGAPLFSIDDEDFVANQEIAKSALDVAKAALT 94

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLT 169
             ++  +    K +  ++   S          ++      V    +S           + 
Sbjct: 95  ANQTKTEMQLVKIEQAKQGIHSANANAEHQAAEFKRLSRLVQKQSVSKNQFEAQRTRSIE 154

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              ++   +L L  +   L AL++   + +   K 
Sbjct: 155 ANSNLETAKLALAAEQKQLDALVTEKMQLIAQRKQ 189


>gi|258514327|ref|YP_003190549.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257778032|gb|ACV61926.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 500

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 86/292 (29%), Gaps = 52/292 (17%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L +  G   +         + S    L +     RS  + +       ++ +      
Sbjct: 102 QLLAEQDGSNLTEQLNQSRASLKSAEAKLALLQNGARSEDIAQS--RENVNMAQNAYDLA 159

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +  L   + L E+ A+SQ D ++ +     +   L++     K +L              
Sbjct: 160 KSTLERNQVLKEQGALSQFDFDKAQSDFKNAESRLKQEQESLKALLAG------------ 207

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI------------VYN 303
                    D+           S+L +         + SP+ GT+              N
Sbjct: 208 -----NRPEDIATASAQVDSAKSQLQMALNDMSGTKLYSPMNGTVSVMNGAEGQRATANN 262

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            + S   +             S    +RA+V    I  VK G    +    Y D     F
Sbjct: 263 NNTSGGGFISV---------ISDQLQVRAQVNESDIGKVKNGQKVELSVNSYQDKI---F 310

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              I  I P    Q   +   + Y+VI+            EL+ G PA V  
Sbjct: 311 NGKISSISP----QAYTVSNVQIYDVIINPDQNYS-----ELKAGMPANVNI 353


>gi|153829972|ref|ZP_01982639.1| multidrug resistance protein VceA [Vibrio cholerae 623-39]
 gi|148874558|gb|EDL72693.1| multidrug resistance protein VceA [Vibrio cholerae 623-39]
          Length = 406

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/372 (12%), Positives = 102/372 (27%), Gaps = 63/372 (16%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GII +  V +   + QG  L+  +D +    +   +  +   +  + +  +  + L+  
Sbjct: 79  GGIIAQVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLANDEGLS-- 136

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                                          + +   N   ++ 
Sbjct: 137 ---------------------------------------------AMVEAQEANEQRVKA 151

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +    +A     + DL+  ++L    +VS  +L   +    ++   L             
Sbjct: 152 QLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQAT 211

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                       A            +        ++    +   E+  I +PI+G +   
Sbjct: 212 KLSTIGSQKANAALTDNTTV----DSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKR 267

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--K 361
           Q        Q   PLM +VP     Y+ A     +++ VK G   T+    Y D      
Sbjct: 268 QV-QVGRRVQVGMPLMTVVPTDH-IYVDANFKEVELRDVKVGQPVTLTADLYGDEVTYHG 325

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN---G--FPAEVLF 415
                        S       T  + +V+ ++   +     +++      G    A +  
Sbjct: 326 VVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATIDT 385

Query: 416 --TAKNTTLAQE 425
             T    TL Q 
Sbjct: 386 AGTTDPQTLVQY 397


>gi|27382704|ref|NP_774233.1| multidrug resistance efflux pump [Bradyrhizobium japonicum USDA
           110]
 gi|27355876|dbj|BAC52858.1| multidrug resistance efflux pump [Bradyrhizobium japonicum USDA
           110]
          Length = 393

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/367 (13%), Positives = 108/367 (29%), Gaps = 81/367 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +   +    SG I K  V +  ++  G  L   +D +                    
Sbjct: 71  VKADSTIVAPKVSGYIAKVLVGDNEKVKAGQVLARIDDRDF------------------- 111

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             K+ALD         E +  + + QL         + + V                   
Sbjct: 112 --KAALDQARADVAAAEASVRNLDAQLELQQPIIEQSTADV------------------- 150

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                         +   A L   Q++     +L +  + +     Q +  +  S  +L+
Sbjct: 151 --------------TAADANLKFAQEERARYDDLMKSGSGTIQRAQQTDAALRASNAQLQ 196

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                     R ++ L               +    Q         +             
Sbjct: 197 HAKSGLLAAQRKVDVL---------------TTQRAQATAQLERARAVAQQAALNLSYTE 241

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P+ GT+   +S     Y Q    LM +VP   +  + A     Q+ HV+ G    +R
Sbjct: 242 ITAPVDGTV-GARSLRVGQYVQSGTQLMAVVPLDAVYVV-ANFKETQLTHVRAGQPVELR 299

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIE-- 404
              +   R +  +  ++ + P    +      +  T  + +++ ++   +   D+++   
Sbjct: 300 VDSF---RSQTLRGHVDSLSPASGLEFALLPPDNATGNFTKIVQRVPVKIVLDDHSLTGL 356

Query: 405 LRNGFPA 411
           LR G  A
Sbjct: 357 LRPGMSA 363


>gi|292899126|ref|YP_003538495.1| efflux pump HlyD family protein [Erwinia amylovora ATCC 49946]
 gi|291198974|emb|CBJ46085.1| putative efflux pump HlyD-family protein [Erwinia amylovora ATCC
           49946]
          Length = 362

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 84/287 (29%), Gaps = 15/287 (5%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           ++LDF   +        +  I    + +     ++        + + +     A++  +Q
Sbjct: 76  EVLDFQPVHRGDLLMTIDDRI--YRQRVHQSGAQLNMKKAALANNQQQRRSAEAVIERNQ 133

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             L   K    K  +    +         S  E   +      ML  + +      +   
Sbjct: 134 AALQNAKAQAVKGGLDLKRVEDLVADGSISVRERDASRASNSQMLAGVQQAQATLEVSRQ 193

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           +    I  +    +   A+  + L + +   +   I++P  G +          Y     
Sbjct: 194 DLQTTIV-NRASLEADVANARAALELAQIDLDNTRIIAPRDGQLGQIAVR-QGAYVTAGT 251

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  +VP        A +   Q+  ++ G               + F   +E I P    
Sbjct: 252 RLTSLVPQQMWLI--ANMKETQMARIRPGLPVIFTVDALD---GESFNGEVEYISPAAGS 306

Query: 377 Q----DNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +      +  T  + ++   + +     SDN   LR G   EV    
Sbjct: 307 EFSAISPDNATGNFVKIAQRIPVRIKITSDNAAHLRPGMSVEVTINT 353



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 76/216 (35%), Gaps = 20/216 (9%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIK 104
               V  I    SG I   +V +   + +G  L+T +D        ++   +++KK ++ 
Sbjct: 57  VRGQVTFISPQVSGYITAVEVLDFQPVHRGDLLMTIDDRIYRQRVHQSGAQLNMKKAALA 116

Query: 105 N-----LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN----- 154
           N            E++     N K   ++   + +  + L   G                
Sbjct: 117 NNQQQRRSAEAVIERNQAALQNAKAQAVKGGLDLKRVEDLVADGSISVRERDASRASNSQ 176

Query: 155 --YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
              G+     +L++    +++  +NR  LE   +  RA L   Q DL   + +  ++   
Sbjct: 177 MLAGVQQAQATLEVSRQDLQTTIVNRASLEADVANARAALELAQIDLDNTRIIAPRDG-Q 235

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +  ++     +   L   + +Q  ++ ++ E  
Sbjct: 236 LGQIAVRQGAYVTAGTRLTSLVPQQMWLIANMKETQ 271


>gi|75906824|ref|YP_321120.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75700549|gb|ABA20225.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 406

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/320 (12%), Positives = 104/320 (32%), Gaps = 51/320 (15%)

Query: 42  ISVSSSGEILNEDNVVEIK---SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +V++ G I  +  V+++    S     +++  V+ G ++  G  +   +          
Sbjct: 60  KTVTALGRIEPKGKVIKLSATTSSEGSRVEQLLVKEGDRVKPGQLIAILDS--------- 110

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                                     D LE A +  +EQ+       + T +      I+
Sbjct: 111 -------------------------RDRLEAALKEAQEQVKVAQANLNRTQAGAKGGEIA 145

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +   ++       R     +L      + L+A + +   +    + L+++ AVS ++ ++
Sbjct: 146 AQQATIAKLEAEGRGNIAAQL---ATVARLQAEVKNATAENQRYQALYQQGAVSASEGDR 202

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           +   +  +   L+E   + + +     +   +A        +    D+E  +      ++
Sbjct: 203 KRLNLETAQKTLQEAQADLQRIQTTSQQQLQQAKATLTQITEVRGVDVEAAKAEVNRAIA 262

Query: 279 KLTILEKTREQKTIL--------SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +   +   +Q  +         SP    +    +            ++ I   +   Y+
Sbjct: 263 AVNQAKVHLQQAYVRWPKELGGSSPQDAQVFEIHTH-PGELVST-DGIVDIG-QTNQMYV 319

Query: 331 RAKVTPKQIQHVKKGYTATV 350
            A+V    I  VK G    +
Sbjct: 320 VAEVYESDISRVKPGQKVRI 339


>gi|299770062|ref|YP_003732088.1| multidrug resistance efflux pump [Acinetobacter sp. DR1]
 gi|298700150|gb|ADI90715.1| multidrug resistance efflux pump [Acinetobacter sp. DR1]
          Length = 362

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 62/431 (14%), Positives = 131/431 (30%), Gaps = 90/431 (20%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGL--ITW---SILLPIEISVSSSGEILNEDNVV 57
           H   ++ K      LK+  ++ I  II L  I W    I LP     +    +  E +  
Sbjct: 9   HSATESAKLTKVQYLKKHWVMVIAFIIVLASILWVLKLIFLPSSTIETDDARVDVEYS-- 66

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I    SG I++  +++   + +G  L                         ID      
Sbjct: 67  TIAPKVSGNIEEIYIKDHQTVKKGQLL-----------------------ARIDAR---- 99

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                            E  L +    Y    + +    ++   +   ++          
Sbjct: 100 ---------------DYEAALAEAESNYAKAEADLNEAKLAVERQPTVIR---------- 134

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             + E +   + A +   + +    + L    A S+    Q +  + +   +L  +  + 
Sbjct: 135 --ETEAQLRKVEAGIKLTKDNTARYEQLQALGAESRLITQQSKTTLTEQYADLDSSKEKV 192

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +    +N+   +   + A   +  +                    +       + +PI 
Sbjct: 193 TDAQYQLNQYKIQVQAKQAALKQAQAAL---------------DKAKLNLSYTEVRAPID 237

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I   +S +  N+     PLM +VP     Y+ A     +++ +K G   TV    Y  
Sbjct: 238 GMI-GQKSANVGNFVGAGNPLMVVVPLD-QVYVEANFREIELKQIKIGQPVTVYVDAYN- 294

Query: 358 IREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKIT---DLAFSDNNIE-LRNGF 409
               + K +++   P      S       T  + +++ ++     L  +  +I+ LR G 
Sbjct: 295 ---VELKGVVDSFSPSTGAFFSPISATNATGNFTKIVQRLPLRIKLIENQKDIKLLRPGL 351

Query: 410 PAEVLFTAKNT 420
              V       
Sbjct: 352 SVVVSVDTNKK 362


>gi|307150241|ref|YP_003885625.1| DevB family ABC exporter membrane fusion protein [Cyanothece sp.
           PCC 7822]
 gi|306980469|gb|ADN12350.1| ABC exporter membrane fusion protein, DevB family [Cyanothece sp.
           PCC 7822]
          Length = 405

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/339 (12%), Positives = 105/339 (30%), Gaps = 51/339 (15%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           L   + +V++ G +  +  V+ + +P       + +  V+ G Q+     +   ++    
Sbjct: 56  LATPDQAVAALGRLEPQGEVINLSAPAFNEGTRVDQLLVKMGDQVKAKQIIAILDN---- 111

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                                          D LE A    + Q+           +   
Sbjct: 112 ------------------------------RDRLEAALRKAKSQVKVAQANLAKIKAGAK 141

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              I++   +++     +     ++   +     + A L++ Q +    ++L+   A+S 
Sbjct: 142 IGAINAQKATIERIQAELEGQMNSQ---QATVEQIAAELNNAQTECGRYQSLYGDGAISA 198

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +D +           +L      +      +N+   EA    A   +    D+   Q   
Sbjct: 199 SDRDNMCVKEASLQEQLASAQANRDRTKATLNQQLAEAKASLAEIAEVRPVDVAIAQAQL 258

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIR 331
            D ++     +   +   + SP AG ++   +++      +      IV        Y  
Sbjct: 259 EDAIAAEKEAQANLDLAYVRSPQAGQVLKIHTYAGERVGDKG-----IVELGNTAQMYAI 313

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           A+V    I  V  G  + +    +      K    ++++
Sbjct: 314 AEVYETDISQVHIGQRSQITGAGFK----GKLLGTVDEV 348


>gi|262283688|ref|ZP_06061453.1| transporter ComB [Streptococcus sp. 2_1_36FAA]
 gi|262260745|gb|EEY79446.1| transporter ComB [Streptococcus sp. 2_1_36FAA]
          Length = 452

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 69/430 (16%), Positives = 155/430 (36%), Gaps = 33/430 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + + S+I ++ L+ +S+L   EI++SS   +     + +I+S  +  I    +    ++ 
Sbjct: 23  LIVPSLILLVFLVGFSMLAKKEITISSRASVEASRVLAQIQSTSNQPIIANHLSENKEVK 82

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDV-----LEKAF 131
           +G  L+ +               +  L+     ++T +S+L+   N++        E++F
Sbjct: 83  KGDLLIQYAVEGEGAQEQKFSSQLDLLKDQKGKLETLRSSLESGRNQFTEPDSYGYEQSF 142

Query: 132 ESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL-- 187
           +  + Q+       +   + +   N   S     L   ++ + S   +  +L+N      
Sbjct: 143 KDYQNQVASMTSSVNQQNATIASQNAAASQSQAELGGVISDVDSKLNDYRNLKNAIQSGV 202

Query: 188 -------LRALLSSHQKDLTMM--KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
                  L +L  S++  L++   K   +   V+Q  L+ Q   +  +    R       
Sbjct: 203 GIDASHPLYSLYQSYRDQLSLAEDKTTAQSQIVAQ--LDGQISQLEATAATYRVQYAGAG 260

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
               + + L  +     A YL ++ ++L    +   +  S L + E   ++  IL+ + G
Sbjct: 261 AQQAYASNLSSQLASLKAQYLVKVGQELTTLTQQILEAESNLKLQETVSKRGQILAEMDG 320

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +  N     S    +   L +I P   + +   I   V+ K +  +K G          
Sbjct: 321 LLHLNPEVQGSTLVAEGTALAQIYPKITNERKIKIVTYVSSKDVSTIKNGDKVRF-ITAD 379

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              ++    + I  ID   +Q     Q   +    ++       D   +LR G   + + 
Sbjct: 380 DANKQMILTSQISSIDANATQ---TKQGNFF---KVECEMAVSKDQAKKLRYGLEGKFVM 433

Query: 416 TAKNTTLAQE 425
                T    
Sbjct: 434 VTGQKTYFSY 443


>gi|156933871|ref|YP_001437787.1| hypothetical protein ESA_01697 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532125|gb|ABU76951.1| hypothetical protein ESA_01697 [Cronobacter sakazakii ATCC BAA-894]
          Length = 360

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 97/302 (32%), Gaps = 29/302 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V + A   + + L+    + +          ++    +L   L + RS        +   
Sbjct: 77  VQDFAHVKQGDVLMTIDDRIYKQRVHQAQATLAMREAALANNLQQRRSAEATIAQNKAAL 136

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  RA    +Q DL  +K L +  ++S                E    I         + 
Sbjct: 137 ASARAQSLHNQADLRRVKELTQDGSLS--------------VRERDAAIASAAQGSASVE 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +   +  +   N L+ +  +    +    +  + L + +   +   I++P  G +     
Sbjct: 183 QAAAQLEVSRQN-LQSVIVNRASLEADVENARAALELAQIDLQNTRIIAPRDGQLGQIAV 241

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                Y      L  +VP        A +   Q+  VK G + T       D +   F+ 
Sbjct: 242 R-QGGYVTAGTRLTSLVPPQNWVI--ANLKETQLADVKTGQSVTFTVDALNDEK---FEG 295

Query: 366 IIEKIDPII----SQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTA 417
            ++ I P      S    +  T  + ++     ++I  L  ++    LR G   +V    
Sbjct: 296 RVQSISPATGVEFSAITPDNATGNFVKIAQRIPVRIEVLGDAEKRARLRPGMSVQVTINT 355

Query: 418 KN 419
           ++
Sbjct: 356 RS 357



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/304 (11%), Positives = 83/304 (27%), Gaps = 24/304 (7%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +G I    V++ + + QG  L+T +D      +   + ++      +        
Sbjct: 64  ISPQVNGYITAVNVQDFAHVKQGDVLMTIDDRIYKQRVHQAQATLAMREAALANNLQQRR 123

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                    + A  S   Q L              +  +S   R        + S     
Sbjct: 124 SAEATIAQNKAALASARAQSLHNQADLRRVKELTQDGSLSVRERD-----AAIASAAQGS 178

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFE--KNAVSQNDLNQQERIVYKSTLELRENIHE 236
             +E  ++ L     + Q  +    +L    +NA +  +L Q +    +        + +
Sbjct: 179 ASVEQAAAQLEVSRQNLQSVIVNRASLEADVENARAALELAQIDLQNTRIIAPRDGQLGQ 238

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE------QK 290
                                    +  +L++ Q         +T             + 
Sbjct: 239 IAVRQGGYVTAGTRL-TSLVPPQNWVIANLKETQLADVKTGQSVTFTVDALNDEKFEGRV 297

Query: 291 TILSPIAGTIVYNQS--FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             +SP  G      +   ++ N+ + +Q +           I      ++   ++ G + 
Sbjct: 298 QSISPATGVEFSAITPDNATGNFVKIAQRI--------PVRIEVLGDAEKRARLRPGMSV 349

Query: 349 TVRF 352
            V  
Sbjct: 350 QVTI 353


>gi|91205782|ref|YP_538137.1| multidrug resistance protein A [Rickettsia bellii RML369-C]
 gi|91069326|gb|ABE05048.1| Multidrug resistance protein A [Rickettsia bellii RML369-C]
          Length = 353

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 93/275 (33%), Gaps = 18/275 (6%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +   ++++  S+      +  I       +N+       L        ++   F    
Sbjct: 88  RDYKAKLAALEASIGASEKNIEIIDQKISIGQNQLEQSGEKLKLAATSFNIVSTDF---- 143

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                + +  +  + S   L ++ +  +       +   + ++   N L+ +  +    Q
Sbjct: 144 ---TRVQELNKAKFASIKALDDSKNAYQKAKTDYKQAQLDIDISKQN-LQLLGLEKAAEQ 199

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +  +   I+ ++ +   +++ ++G +  N S    NY    + L  IV      YI
Sbjct: 200 EKLKELEANKKIILRSLQNTKLIAAVSG-VFGNSSLEVGNYITPGRALFSIV-QDNSMYI 257

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEY 386
           +A     QI+  + G    ++F     I +K F   I  I P    +      +  T  +
Sbjct: 258 QANFKETQIKKFQPGMKVEIQFDA---IPKKTFYGKIRNISPATGSKFTLIPPDNATGNF 314

Query: 387 YEVILKITDLAFSDNNI-ELRNGFPAEVLFTAKNT 420
            +++ ++  L   D  +  L  G    V       
Sbjct: 315 TKIVQRVPVLIDFDAPVANLIPGMSVIVSIRTDQK 349


>gi|81300208|ref|YP_400416.1| hypothetical protein Synpcc7942_1399 [Synechococcus elongatus PCC
           7942]
 gi|81169089|gb|ABB57429.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 384

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 119/345 (34%), Gaps = 50/345 (14%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +    V+ +++P  GI+  FQ+  G +I    PLL  E+  T+            L+  +
Sbjct: 30  IVNAKVITLQAPDDGIVTDFQIRPGEEIPANQPLLRIENPRTST------FEQARLQTQL 83

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           DTE+                           L       S +          +   +   
Sbjct: 84  DTEQQK-------------------------LKLQQDQLSNISQLRQQVERDNRNQRQLE 118

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV-------SQNDLNQQERIV 223
           +      R  L+   +  R  L+  ++     ++L    A+       ++ D  +Q+  +
Sbjct: 119 INKFTAQRRKLQADINAAREQLALAKRIYERRRDLATTGAIAIEVADQAETDYLRQQDAL 178

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              T EL     + K     +  +    N + +  L+E+     Q +   A + +++  L
Sbjct: 179 TALTKELTSREQDLKAAQLGLTLINSRTNYDPSVRLQELKIQETQLRSQVAAQTAQVNGL 238

Query: 284 EKTREQKT----------ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           +   ++ T          + SP+  T+++  S S+ +   + QPL K +   +  +I   
Sbjct: 239 KNQLQEITRNTRSRQNIPLSSPV-PTVLWQSSVSNGDVVTRGQPLAKTI-DCRDRWIDVY 296

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +    ++ V+ G +A +           K   I   +  +   +D
Sbjct: 297 IGETALRQVRIGESARIDLIGKDQSITGKVAFIRSGVGRLRIGED 341


>gi|229521510|ref|ZP_04410929.1| hypothetical protein VIF_002047 [Vibrio cholerae TM 11079-80]
 gi|229341608|gb|EEO06611.1| hypothetical protein VIF_002047 [Vibrio cholerae TM 11079-80]
          Length = 395

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/378 (13%), Positives = 103/378 (27%), Gaps = 63/378 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E+     GII +  V +   + QG  L+  +D +        ++++      +   K  +
Sbjct: 62  EVTPVVGGIIAQVNVVDTEYVKQGDVLVQLDDTDA-------RLALLQAEADLALAKRRV 114

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                  + L    E++E        ++ +  +      I                    
Sbjct: 115 RSYLANDEGLSAMVEAQEANEQRVKAQFKAAQADFERAKI-------------------- 154

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
                               DL+  ++L    +VS  +L   +    ++           
Sbjct: 155 --------------------DLSRREDLVRSGSVSGEELTNAKTGFAQAQANFNAAKAAM 194

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                             A            +        ++    +   E+  I +PI+
Sbjct: 195 AQAQATKLSTIGSQKANAALTDNTTV----DSNPEVLLAKARYEQAKIDLERTVIRAPIS 250

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   Q        Q   PLM +VP     Y+ A     ++++VK G   T+    Y D
Sbjct: 251 GVVAKRQV-QVGRRVQVGMPLMTVVPT-TQIYVDANFKEVELRNVKVGQPVTLTADLYGD 308

Query: 358 IRE--KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN---G--F 409
                              S       T  + +V+ ++   +     +++      G   
Sbjct: 309 EVTYHGVVVGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSM 368

Query: 410 PAEVLF--TAKNTTLAQE 425
            A +    T    TL Q 
Sbjct: 369 VATIDTAGTTDPQTLVQY 386


>gi|224373655|ref|YP_002608027.1| putative membrane fusion protein [Nautilia profundicola AmH]
 gi|223588430|gb|ACM92166.1| putative membrane fusion protein [Nautilia profundicola AmH]
          Length = 369

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 55/409 (13%), Positives = 135/409 (33%), Gaps = 64/409 (15%)

Query: 20  MTLLSIIGIIGLITWSILLPIEI---SVSSSGEI---LNEDNVVEIKSPFSGIIKKFQVE 73
           + +++++ + G   +  L P E+    V + G I   +   N         G + K  V+
Sbjct: 9   VIIIALLVVAGYFIYVKLNPKEVPPYLVEAVGRIDADVVNLNTKY-----PGRVVKLNVD 63

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +G  +      E                                          
Sbjct: 64  TGDEVQKGEVIAKLNSKEF----------------------------------------- 82

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             ++ L+ L +     +  F    S +  ++K     +++       L  +   L+ +++
Sbjct: 83  --QEKLNALNEQIKAKTNEFKALKSKIENTIKKAELNIKAKTAEINALNAQIDALQKVIN 140

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              KD   + +L ++N   +++L            +L+  + +++ +   +     + N+
Sbjct: 141 QDVKDEKRLSSLVKRNLAKEHELEMARLKTQTDKDKLKGLLAKKEALKSALEAAKKDLNI 200

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             +        +L+  + +          L+   ++ T+ SP+ G +    + +      
Sbjct: 201 ALSQ-----QNNLKAFEHSIKALEHNRDELQTMIDEMTLKSPVNGFVDTKIANT-GEVIG 254

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              P++ I+  +   Y++  V       +K G  A +    + D   K  KA + KI   
Sbjct: 255 AGMPVVSII-DNSSFYLKIYVDEITNGKIKLGDKAEIFLDSFPD---KPIKAEVVKIAKR 310

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
                  +  +      +    L   + N  L+ G PA  +    N +L
Sbjct: 311 AEFTPKEVAVRSDRITRVYEVHLKPVEPNKYLKLGLPATGVVLIGNGSL 359


>gi|189467243|ref|ZP_03016028.1| hypothetical protein BACINT_03629 [Bacteroides intestinalis DSM
           17393]
 gi|189435507|gb|EDV04492.1| hypothetical protein BACINT_03629 [Bacteroides intestinalis DSM
           17393]
          Length = 363

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 108/360 (30%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I+K       ++ +G  LL  +D          K+ +      +   ++    +   
Sbjct: 75  SGYIRKIYFTEHQEVRKGDTLLVLDD-------REYKIRVMEAEAALKDAQAGATVIGAT 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +                                                     + 
Sbjct: 128 LQTTQTTASV-----------------------------------------------YDA 140

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             S +   L+  +KD    +NL ++NA +   L Q E     +  +L     ++K  L  
Sbjct: 141 SISEIEIRLAKLEKDRQRYENLVKRNAATPIQLEQIETEYEATHKKLEAVKRQRKAALSG 200

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +N               E+S   E  +       + L + +       +++P  G  +  
Sbjct: 201 VN---------------EVSHRRESTEAAIQRATAALEMAKLNLSYTVVVAPCDGK-LGR 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     +    Q +  I+P ++   + A     QI+++  G    +     +D    +F
Sbjct: 245 RALEEGQFISAGQTITYILPDTQKWIV-ANYKETQIENLHLGQEVVITVDAISDR---EF 300

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
              +  I           P  +   N ++ Q+   V +  T+L+  DN  +L  G    V
Sbjct: 301 TGTVTAISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTNLSKEDNG-KLAAGMMVVV 359


>gi|296120741|ref|YP_003628519.1| secretion protein HlyD family protein [Planctomyces limnophilus DSM
           3776]
 gi|296013081|gb|ADG66320.1| secretion protein HlyD family protein [Planctomyces limnophilus DSM
           3776]
          Length = 414

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 94/316 (29%), Gaps = 77/316 (24%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
              P    V+ SG I  +   + + +  +G++ +  V  G  + +G  L   +D +    
Sbjct: 38  ARSPYRQVVAGSGLIEAKSENISVAAETAGVVTEIAVRVGQSVEKGQVLFRLDDRKQRSE 97

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           + ++  ++ + +  ++     L  L    D+   A                         
Sbjct: 98  LGVQTAALLSAKAELER----LKALPRPEDLPPSA------------------------- 128

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                                       K +  R  L   +  L   + L  K  + Q +
Sbjct: 129 ---------------------------AKLAEAREDLELQRDQLNRAEELVAKRVIQQEE 161

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +R    S    R    E ++          E +++ A  L+   + + Q Q     
Sbjct: 162 LV--QRKQAYSMARARLENAEAQDQKLRAGAWSYEIDVQKAAVLR-AEQQVAQAQTEI-- 216

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRAK 333
                       ++  + SPI G ++         +      QPL+ I+      ++R  
Sbjct: 217 ------------DRLVVKSPINGVVLKVDLR-PGEFVGAPPGQPLI-IMGDLSTLHVRVD 262

Query: 334 VTPKQIQHVKKGYTAT 349
           +  + I   + G  A 
Sbjct: 263 IDEQDIPRFRPGLPAK 278


>gi|126659482|ref|ZP_01730615.1| hypothetical protein CY0110_07144 [Cyanothece sp. CCY0110]
 gi|126619216|gb|EAZ89952.1| hypothetical protein CY0110_07144 [Cyanothece sp. CCY0110]
          Length = 454

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/329 (11%), Positives = 93/329 (28%), Gaps = 46/329 (13%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +     V    S  +G IK   V  G ++ QG  L+  E  +    +     ++K   
Sbjct: 57  GTLEARQRVELAPSRTNGRIKAIFVREGDRVSQGQRLIEIEPQQQQQDLVAATGNLKVAM 116

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +   ++                                                    
Sbjct: 117 ADLKAAEAEY----------------------------------------RQREAERDRA 136

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           L  + +   N    + +   ++A L   +K+      L  ++ V    L+   R +  + 
Sbjct: 137 LADVETARANLASTDAEVQRVQAELILAEKNHQRATFLESEDVVPTETLDDATRTLNATQ 196

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L+  I  +    + +    +         + +   +++  + +      +      T 
Sbjct: 197 AQLQSTIKTRDASQQALKAQQNNLRA-AERRVDQALANVDSRRSSIVQAQGQQGATAVTL 255

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               + +PI G I         +     +P+  I   +++ Y+   V  +    ++KG  
Sbjct: 256 GYNFLEAPITGVIGEFNEKKIGDSVSIGEPITTIT-DNQVFYLNVNVPIENRNRLQKGLP 314

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQ 376
             +             +  I  I P + Q
Sbjct: 315 VEL----INQNGTSGVQGQITYIAPQVDQ 339


>gi|299143714|ref|ZP_07036794.1| putative efflux transporter, RND family, MFP subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
 gi|298518199|gb|EFI41938.1| putative efflux transporter, RND family, MFP subunit [Peptoniphilus
           sp. oral taxon 386 str. F0131]
          Length = 688

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 128/349 (36%), Gaps = 44/349 (12%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             + +  +  +      + NL+  ++ EK  +    N+ ++L+ + E++++ +     + 
Sbjct: 266 QIDPV-LSARLTQANSDMVNLKNRLEFEKLRVPKDENEINILQLSVENQQKLIDSIQAEI 324

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            ++         SS+ + L+    ++  +     DL+ K   L + +  +Q ++   +  
Sbjct: 325 KNSMIDN-----SSLIKELENVTNQISELNTISKDLKAKIVELESDIKKYQAEVETGRKT 379

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHE-------QKNMLRHINELYDEANLEFANY 258
            ++    + D  QQ   +  +   +  N+ +       +++ML+   +  D+    + N 
Sbjct: 380 IDEK---KKDFEQQRLALENANKNISSNVEQKNLSDKSRQDMLKSYRKNADDLKHAYENA 436

Query: 259 LKEISRDLEQNQRTFADEMS----------------KLTILEKTREQKTILSPIAGTIVY 302
           +K +               +                +L  L +  E+  I +P+ GTI  
Sbjct: 437 IKNVKVAEVAQDNEINALKNNLKTAGANGDTTVNSIELKNLYQDLERTVIKAPMDGTITE 496

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                       +  + KI      T + +++    +  VK G    +    +   ++K 
Sbjct: 497 KNLI-QGQV--PTDYVAKI-ETIDRTIVESQIKEFDLNRVKVGMDVEITSDAFG--KDKI 550

Query: 363 FKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           FK  +E I+P  S+    +    +  Y   +   D + +D    L+ G 
Sbjct: 551 FKGKVESINPTPSKKRDQSQNSNEVVYTTKISFDDTSVTD----LKPGM 595



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 84/246 (34%), Gaps = 17/246 (6%)

Query: 42  ISVSSSGEILNEDNVVEI--KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
            +V+ SG++L+ED+      KS     +K+  +E G Q+ +G  +   +D      I +K
Sbjct: 56  SAVNESGKVLSEDSAQIYAEKSLP---VKEINIEVGMQVKKGDVIARLDDTTIKQQIAIK 112

Query: 100 KVSI----KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
              I    K+    +   +  LD                    +        T  K +N 
Sbjct: 113 SAMIGATNKSTSLQVKNAQDKLDEALKNKSDGTNGSVVSANNAVTAAYDAWITAEKTYNN 172

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
              S+      +L   +S   +  +  N + L  A   S+ +    +++L E        
Sbjct: 173 YKKSLEEGYNEQLVANKSTMDSLQNGANSAGLNYAQ--SNDRLNKEIQSLNESGR----- 225

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                + V    L+ R++ ++++       +   +A          +S  L Q      +
Sbjct: 226 -LAYMKSVELGNLKARDSENDRRIAELQRKQETLKAQSTAPQIDPVLSARLTQANSDMVN 284

Query: 276 EMSKLT 281
             ++L 
Sbjct: 285 LKNRLE 290


>gi|78046801|ref|YP_362976.1| membrane fusion protein RaxA [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78035231|emb|CAJ22876.1| membrane fusion protein RaxA [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 412

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/388 (12%), Positives = 120/388 (30%), Gaps = 46/388 (11%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G ++    ++ + +P SG++ +     G ++  G  L                       
Sbjct: 60  GTVVPAGGLISVTTPQSGVVVQVGAVQGQRVAAGQLLFVLS------------------- 100

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                  +       +         + +++L            +V     +     L+ +
Sbjct: 101 -------AEHRDDRGRPTQRAAVVLAEQQRLAVEAMAQLRAQGRVQQQAAARALAGLRDR 153

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           L +          ++ +  LLR      Q      +    +  VSQ  +++++  V    
Sbjct: 154 LQQ----------IDAELDLLRHRQQLTQSIEQRYRTALTRGLVSQQFVDEKQADV---- 199

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           L+ R +  E +     + +   +A  E       + + L        ++  +  I +   
Sbjct: 200 LDQRAHTLELQRERMALADALAQAQAEVQQLPSNLRQQLAMAGAGLQEDR-RAAIEQAAA 258

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +  + +P AG +   +         Q Q L  ++P S  T +      +    +  G  
Sbjct: 259 SRWEVRAPRAGRV-ALRPLQRGQAVAQGQRLADLLPTSMATEVVLYAPSRAAGLIGPGMP 317

Query: 348 ATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE- 404
             +RF         +F   + +I   P   + D+   ++  Y V +++   A        
Sbjct: 318 VQLRFDALPYQHYGQFAGQVVEIAVAPEPPRVDSVSVSEPLYRVRVRLAGDAALRAGRTA 377

Query: 405 -LRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            LR G   +     +    +Q    P++
Sbjct: 378 VLRPGMRVQGTLALEWRRFSQWAFEPLS 405


>gi|221068756|ref|ZP_03544861.1| secretion protein HlyD family protein [Comamonas testosteroni KF-1]
 gi|220713779|gb|EED69147.1| secretion protein HlyD family protein [Comamonas testosteroni KF-1]
          Length = 390

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/429 (11%), Positives = 122/429 (28%), Gaps = 75/429 (17%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITW---SILLPIEISVSSSGEILNEDNVVEI 59
           +   +  +RN   +     +L   G  G   W   S  +  + + ++         V ++
Sbjct: 11  NPAAREQRRNRLLAALAGVVLLAGGAAGAYWWLHASHFVSTDNAYAA-------AEVAQV 63

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
                G + +  V +   + QG  L+  +  +    +   +  +      +    +    
Sbjct: 64  TPSIGGTVLEVLVRDTQAVKQGDVLVRIDPTDARLALAQAEAELARATRRVKGYVANDGG 123

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           L  +    E                             +   R+    L     +    +
Sbjct: 124 LKAQVTARE-----------------------------ADEKRAAAQLLAAEADMERATI 154

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           DL+ + +                  L +  +VS  +L Q +     +  +L   +  Q  
Sbjct: 155 DLQRRQA------------------LAKSGSVSGEELTQAQNAFAAAKAQLASAVAAQAQ 196

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
              +         +        I     Q         ++    +   ++ T+ +P+ G 
Sbjct: 197 ARANREAAIGAKQVN----ASLIEGADAQTNPEVQLAQARRDQAQVDLDRSTVRAPVDG- 251

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +V  +S       Q   PLM +VP  +  Y+ A     Q+  V+ G    ++   Y    
Sbjct: 252 VVAKRSVQIGQRVQAGAPLMTVVPV-QRIYVDANFKEGQLGKVRVGQRVQLQSDLYGSDV 310

Query: 360 EKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
             K+   +              P  +   N ++  +   V +++     + N + +    
Sbjct: 311 --KYSGTVVGFSGGSGSAFAAIPAQNATGNWIKVVQRLPVRIQLDAAELARNPLRVGLSM 368

Query: 410 PAEVLFTAK 418
              V   + 
Sbjct: 369 QVTVDTRSG 377


>gi|318042366|ref|ZP_07974322.1| membrane-fusion protein [Synechococcus sp. CB0101]
          Length = 443

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/376 (14%), Positives = 119/376 (31%), Gaps = 66/376 (17%)

Query: 21  TLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
            LLS+I + GL   W++  P+   V   G ++       + S   G I++  V+ G ++ 
Sbjct: 28  VLLSLISVGGLTALWALFWPVPTEVVGRGVVIVPGGATVLDSRAEGQIRELNVKVGDRVR 87

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L+  +       ++ ++  ++ L      E+   D        L  A E R+  L 
Sbjct: 88  KGQLLMVLDQPALEKQLERQERDLREL------EQINGDLNRRDAIRLAAAREVRDTAL- 140

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                                    LE +   +R+L  ++ + +
Sbjct: 141 ---------------------------------------RKLERERQRVRSLQGTYAQKV 161

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
               +L +   V+   L Q+         +L+  + E     + +   Y +  L+     
Sbjct: 162 ADFAHLAKTEVVAP--LGQEVVATSDRNTQLQVELDELNIREKDVISAYTKVKLDIDTEQ 219

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++    ++  +R      ++L        +  + +   G+I+  Q        +  Q L 
Sbjct: 220 QQRRFRIDNTRREVRVSEARLKY------EGNLTAKRDGSILDLQVI-RGQTVKPGQRLG 272

Query: 320 KI-VPHSKL-------TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +  P +             A   P   + ++ G    V        R    + ++E++ 
Sbjct: 273 TLGAPAATDTNTQPPALQAIAYFHPADARRLQHGQGIEVVPDWQQRGRFGGIQGVVERVS 332

Query: 372 --PIISQQDNNLQTQE 385
             P   +  N      
Sbjct: 333 LLPATPEDINTTMGNP 348


>gi|294650438|ref|ZP_06727798.1| multidrug efflux MFS membrane fusion protein [Acinetobacter
           haemolyticus ATCC 19194]
 gi|292823658|gb|EFF82501.1| multidrug efflux MFS membrane fusion protein [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 355

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 90/291 (30%), Gaps = 27/291 (9%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +  F  + E L     + +          ++    +L ++    +S   +  +  +    
Sbjct: 77  DNQFVKKGETLAVLDQRDYQARLNQAKSLVTLKEAALVVQEQNEKSAQSSIHEANSGVLA 136

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A LS  +KD    ++L +   +++ +    +     +  +L   +            L
Sbjct: 137 AQADLSRLKKDFLRYQDLLKDGVITRQNFENIQSQYLSAQAQLSRALAGVNAAEAQFGSL 196

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                               Q      +  + L + +       I++P+ G +       
Sbjct: 197 K---------------ASRAQLLADIQNAKASLDLYQIDLASARIITPVTGKVGSLAI-Q 240

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             +       LM I+P     Y++A     QIQ +  G T +++   Y  +        I
Sbjct: 241 KGSRVSPQTRLMAIIP-DNSLYVQANFKETQIQKMHIGQTVSLKLDAYPSLTY---TGKI 296

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPA 411
           E   P           +  T  + +V+ +I     +  S +   ++ G   
Sbjct: 297 ESFSPASGATFSLMPPDNATGNFNKVVQRIPVRIAIDPSPHIELIKPGMSV 347


>gi|307295078|ref|ZP_07574920.1| efflux pump membrane protein [Sphingobium chlorophenolicum L-1]
 gi|306879552|gb|EFN10770.1| efflux pump membrane protein [Sphingobium chlorophenolicum L-1]
          Length = 383

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/358 (12%), Positives = 94/358 (26%), Gaps = 61/358 (17%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V +   + +G  L+  +       +   +  +   R       +    L  + +   
Sbjct: 79  EVLVTDTQSVKRGDILVKLDPTNARIAMAQAEADLAEARRRFRQTVATSGSLAAQVEARG 138

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E    QL      +                                           
Sbjct: 139 ADIERARAQLATAQADFDKARI-------------------------------------- 160

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                    DL   + L    AVS  +L        K+    +  + + +  +       
Sbjct: 161 ---------DLRRREALAPNGAVSGEELT----SARKAYAAAQAALDQARAGVATAEATR 207

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A  + A     +               ++L       ++  I +PI G +   Q    
Sbjct: 208 GAATGQLAANDALVRGSTIDTDPAVLAAKARLDNARLDLDRSVIRAPIDGVVTRRQV-QV 266

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA-----DIREKKF 363
                Q  P+M IVP     Y+ A    +Q+  VK G  ATV    Y        +   F
Sbjct: 267 GQRVAQGTPIMTIVPL-AQVYVDANFKERQLGRVKVGMPATVTSDLYGGDVVYHGKVVGF 325

Query: 364 KAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                    +I  Q+      +  +   V + +     +++ + +     AE+  + +
Sbjct: 326 SGGTGASMALIPAQNATGNWIKVVQRLPVRIALDPKELAEHPLRVGLSMEAEIDLSGE 383


>gi|78224651|ref|YP_386398.1| secretion protein HlyD [Geobacter metallireducens GS-15]
 gi|78195906|gb|ABB33673.1| Secretion protein HlyD [Geobacter metallireducens GS-15]
          Length = 335

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 100/299 (33%), Gaps = 34/299 (11%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE----------- 182
           R E+LL   G+       V     S + R ++ +   + +     L+L+           
Sbjct: 53  RVERLLTDEGRKVVAGEAVAVLDRSELLRQMEAQRAVIDASSARLLELQHGSRPQEKRSA 112

Query: 183 -NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
               +   A L    KDL   + LF   A++      Q+R V K + E+ +   +     
Sbjct: 113 RAMVASASADLEKAVKDLERAETLFRNGAIA-----AQQRDVAKRSFEVAKAQQDHAVQN 167

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             + +                   +   +       ++L +  +      + +P+ G ++
Sbjct: 168 ESLVKEGPRLET------------IRATEAQVRQAGAQLGVYREQLADMELKTPVKGVVL 215

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                 +        P+  +       +++  V   ++  VK G  A V    Y   +  
Sbjct: 216 RKNV-EAGETVTAGTPIFTVGELEHP-WVKIYVKEDKLGLVKLGQKAEVTVDTYPGRK-- 271

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            F  ++  I         N+QTQE    ++    ++  + N EL+ G PA+V     + 
Sbjct: 272 -FAGVVTYISSEAEFTPKNVQTQEERVKLVFGVKVSVDNPNQELKPGMPADVRIVTGDR 329



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 58/174 (33%), Gaps = 13/174 (7%)

Query: 47  SGEILNEDNVVEIKSPFS----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +G +L+  NV   +        G +++   + G +++ G  +   +  E    ++ ++  
Sbjct: 30  TGILLSSGNVEVTEVDLGFKVPGRVERLLTDEGRKVVAGEAVAVLDRSELLRQMEAQRAV 89

Query: 103 IKNLRCHI---------DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           I      +           ++SA   + +    LEKA +  E     F     +   +  
Sbjct: 90  IDASSARLLELQHGSRPQEKRSARAMVASASADLEKAVKDLERAETLFRNGAIAAQQRDV 149

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                 V ++ +    +  S+      LE   +    +  +  +     + L +
Sbjct: 150 AKRSFEVAKAQQDHAVQNESLVKEGPRLETIRATEAQVRQAGAQLGVYREQLAD 203


>gi|115358027|ref|YP_775165.1| secretion protein HlyD family protein [Burkholderia ambifaria AMMD]
 gi|115283315|gb|ABI88831.1| secretion protein HlyD family protein [Burkholderia ambifaria AMMD]
          Length = 372

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/362 (10%), Positives = 92/362 (25%), Gaps = 82/362 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V +   +  G PL+  +       +   +V++      +D  ++         
Sbjct: 76  GYVTDVYVRDNQVVKAGDPLVRLD-------VRQYQVALAQSTATVDARRA--------- 119

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                  +      +     N    E +
Sbjct: 120 --------------------------------------DIARAEADISQQRANLEQAEAQ 141

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + + +        +      L    A +   +            +L+    +    L   
Sbjct: 142 AKVSQINARHSSDEYARYAPLAATGAETHERV-----------ADLKSTRDQAAATLAAN 190

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                 A  + A++    +  L+Q +       +         +   + S + G +  ++
Sbjct: 191 TASIAAARTQIASF----TAQLQQARAQLEAAQASAAQARLDLDNTIVRSTLDGRV-GDR 245

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     Y Q    L+ +VP + +  + A     QI  ++ G    +      D       
Sbjct: 246 TVRVGQYVQPGTRLLTVVPVNAIYLV-ANFKETQIGRMRIGQPVELHVDALPDDT---LS 301

Query: 365 AIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             ++   P        +  +      T+    V ++I   A +     L  G    V   
Sbjct: 302 GTVDSFAPGTGAQFALLPPENATGNFTKIVQRVPVRIRLAANARAPRMLVPGLSVTVDVD 361

Query: 417 AK 418
            +
Sbjct: 362 TR 363


>gi|331086638|ref|ZP_08335715.1| hypothetical protein HMPREF0987_02018 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330409804|gb|EGG89239.1| hypothetical protein HMPREF0987_02018 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 561

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/375 (11%), Positives = 120/375 (32%), Gaps = 51/375 (13%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE-----TTDLIDLKK 100
            SG +   +      SP +  + + + + G  +  G  L+ F+  +         +DL+ 
Sbjct: 86  VSGTVD-SEKKKVFYSPVNAPVSQLRAKVGQAVKAGDLLVAFDTSDLEKNNQKAQMDLQS 144

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
               N       ++SA +      D    A  +R +             +K  +  ++S+
Sbjct: 145 AVNTNQSAREQADRSASEAAKAAADAQAAAGAARAQAEQQIASVESQISAK--SQQMASL 202

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            +S+K ++T  +++     +   + +     ++    ++  ++       +S+ D  + +
Sbjct: 203 EQSVKDEITANQTLQPQLDEWNAQKAANLERIAVLYGEIEKIRIDLADENLSEEDKKRLQ 262

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
               + +LE+ E       +   I ++  +          +I ++++  Q       + +
Sbjct: 263 TQRDEKSLEVSEKEGANAALDAQIAQVSAQIQTGSQQAYAQIQQEVQALQAQAEQLRASI 322

Query: 281 TILEKT-----------------------------------REQKTILSPIAGTIVYNQS 305
           ++   +                                   + +  I +   G I   ++
Sbjct: 323 SVETPSASIPDTSLTQGQINNMAITENLAELAVLSSEELMAKARDGIKADFDGVISDVKT 382

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A     L  +V  ++   ++ ++       V+ G  A V+   Y          
Sbjct: 383 M-EGGTAVAGGELFTLV-SNQDVNVKLEIPASDFDKVEVGSKAVVKIGKYKY------DG 434

Query: 366 IIEKIDPIISQQDNN 380
           ++E ID I       
Sbjct: 435 VVESIDKIAVPNTKG 449


>gi|150376136|ref|YP_001312732.1| secretion protein HlyD family protein [Sinorhizobium medicae
           WSM419]
 gi|150030683|gb|ABR62799.1| secretion protein HlyD family protein [Sinorhizobium medicae
           WSM419]
          Length = 371

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/416 (12%), Positives = 120/416 (28%), Gaps = 83/416 (19%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +KR         T L + G+      +      +   +        ++  I    +G + 
Sbjct: 1   MKRKIKGVASAATALLVFGVGAYFGRAWWQEFRMHERTD-NAYVRADITAISPKVAGYVS 59

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V++   +  G  LL  +D +     D                               
Sbjct: 60  TVLVDDNQVVEAGAILLRIDDDDYLAQRD------------------------------- 88

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                             +         + ++ R   ++L  +R       + E    + 
Sbjct: 89  ----------------RAAASVAQAEAAVGNLTRRKSLQLANIR-------EAEAMIDVA 125

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           RA L   +++L+    L ++   +Q       R    +T + +                 
Sbjct: 126 RADLELSRRELSRATRLVDQGWTAQ-------RNHDTATAKAQSARATLVRAEAAAAAAR 178

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +  +        +  +  Q     A+  + L + E    +  I +P++G +V N+    
Sbjct: 179 AQLAV--------LDSESPQISARLAEARANLRLAEIALSETVIRAPVSG-VVGNRKVRE 229

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
             Y +    L+ +VP   +  + A +   Q+  V  G  A +R   Y+       +  ++
Sbjct: 230 GEYVRPGSVLLSVVPLDGIWVV-ANLKETQLARVMPGQRAEIRVDGYS---TTVIEGRVD 285

Query: 369 KIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFT 416
            + P           +  T  + +V+ ++      + +      L  G   +V   
Sbjct: 286 SLAPASGAAFSLLPPDNATGNFIKVVQRVPVKIRLEPDHAFQGRLVPGLSVDVAIH 341


>gi|329900781|ref|ZP_08272585.1| Membrane fusion component of tripartite multidrug resistance system
           [Oxalobacteraceae bacterium IMCC9480]
 gi|327549370|gb|EGF33938.1| Membrane fusion component of tripartite multidrug resistance system
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 402

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 87/296 (29%), Gaps = 32/296 (10%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + Q +              N  +      L   +  +R++++N   L    +   
Sbjct: 77  AINADDTQRVQAGASLVLLDPSDANVALDQATAQLAQAVREVRTLFVNNGALNANITSRN 136

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L   + DL   + L    AVS+ +L                     +  L+       
Sbjct: 137 SELERARNDLARRQELIGSGAVSKEEL------------------AHARTALQSAESAAV 178

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A  + A+      +       T     +++        + T+ +PIAG I   +S    
Sbjct: 179 AAREQLASNRVLTDQTSVAQHPTVLRAAAQVQAAYLATARMTLPAPIAGYIAK-RSVQVG 237

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  PL+ IVP     ++ A     QI  ++ G   T+    Y       +   +  
Sbjct: 238 QRIAAGMPLLSIVPLDS-LWVDANFKEVQIDRMRIGQPVTLHSDVYGSKA--NYHGKVIG 294

Query: 370 IDPIISQQDNNLQTQ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +          L TQ          +   V + +     ++  + L      EV  
Sbjct: 295 LSAGTGSAFALLPTQNASGNWIKVVQRVPVRISLDPAELAERPLRLGVSMQVEVDI 350



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 13/237 (5%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSI---LLPIEISVSSSGEILNEDNVVE 58
           +      +    P   +R  LL + G++ L+  +             S+ +     NVV+
Sbjct: 7   NPPASVPVVTAPPRGKRRFLLLVMTGVLILLLIAYGIWWFIFASHFESTDDAYVAGNVVQ 66

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S   G +     ++  ++  G  L+  +  +    +D     +      + T      
Sbjct: 67  VTSQIGGTVIAINADDTQRVQAGASLVLLDPSDANVALDQATAQLAQAVREVRTLFVNNG 126

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLTRMRSIYL 176
            LN          E     L        S     +   +  +++  +    +     +  
Sbjct: 127 ALNANITSRNSELERARNDLARRQELIGSGAVSKEELAHARTALQSAESAAVAAREQLAS 186

Query: 177 NRL-----DLENKSSLLRALLSSHQKDLTMMK---NLFEKNAVSQNDLNQQERIVYK 225
           NR+      +    ++LRA        L   +          +++  +   +RI   
Sbjct: 187 NRVLTDQTSVAQHPTVLRAAAQVQAAYLATARMTLPAPIAGYIAKRSVQVGQRIAAG 243


>gi|169795869|ref|YP_001713662.1| putative multidrug resistance efflux pump [Acinetobacter baumannii
           AYE]
 gi|213157438|ref|YP_002319483.1| multidrug resistance efflux pump [Acinetobacter baumannii AB0057]
 gi|215483354|ref|YP_002325565.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB307-0294]
 gi|301345661|ref|ZP_07226402.1| multidrug resistance efflux pump [Acinetobacter baumannii AB056]
 gi|301511006|ref|ZP_07236243.1| multidrug resistance efflux pump [Acinetobacter baumannii AB058]
 gi|301597457|ref|ZP_07242465.1| multidrug resistance efflux pump [Acinetobacter baumannii AB059]
 gi|88758856|emb|CAJ77840.1| Putative RND family drug transporter [Acinetobacter baumannii AYE]
 gi|169148796|emb|CAM86664.1| putative Multidrug resistance efflux pump [Acinetobacter baumannii
           AYE]
 gi|213056598|gb|ACJ41500.1| multidrug resistance efflux pump [Acinetobacter baumannii AB0057]
 gi|213987407|gb|ACJ57706.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB307-0294]
          Length = 361

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 63/428 (14%), Positives = 129/428 (30%), Gaps = 90/428 (21%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGL--ITWS---ILLPIEISVSSSGEILNEDNVV 57
           H M ++ K      LK+  ++ I  II L  I W    I LP  I  +    +  E +  
Sbjct: 9   HSMTESPKLTKMQYLKKHWVMVIAFIIVLVSILWILKVIFLPSSIVKTDDARVDVEYS-- 66

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I    SG I++  +++   + +G  L                         ID      
Sbjct: 67  TIAPKVSGNIEEIYIKDHQTVKKGQLL-----------------------ARIDAR---- 99

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                            +  L +    Y    + +    ++   +   ++          
Sbjct: 100 ---------------DYQAALAEAESNYAKAQADLNEAMLAVERQPTVIR---------- 134

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             + E +   + A +   + +    + L    A S+    Q +  + +   +L  +  + 
Sbjct: 135 --ETEAQLRKVEAGIKLTKDNTARYEQLQALGAESRLITQQSKTTLTEQYADLDSSKEKV 192

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +    +N+   +   + A   +  +                    +       I +PI 
Sbjct: 193 IDAQYQLNQYKIQVQAKQAALKQAQAAL---------------DKAKLNLSYTEIRAPID 237

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I   +S +  N+     PLM +VP     Y+ A     +++ +K G   TV    Y  
Sbjct: 238 GMI-GQKSANVGNFVGAGNPLMVVVPLD-QVYVEANFREIELKQIKIGQPVTVYVDAYN- 294

Query: 358 IREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIE----LRNGF 409
               + K +++   P      S       T  + +++ ++        N      LR G 
Sbjct: 295 ---VELKGVVDSFSPSTGAFFSPISATNATGNFTKIVQRLPLRIKLLENQPDIKLLRPGL 351

Query: 410 PAEVLFTA 417
              V    
Sbjct: 352 SVVVSVDT 359


>gi|163748652|ref|ZP_02155905.1| HlyD family secretion protein [Shewanella benthica KT99]
 gi|161331762|gb|EDQ02566.1| HlyD family secretion protein [Shewanella benthica KT99]
          Length = 352

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/297 (19%), Positives = 109/297 (36%), Gaps = 34/297 (11%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLS 193
            QL D   +   T  +       +  ++L  K++  +++        +  +S  LRA   
Sbjct: 72  AQLEDNQYEAKVTQKQAELDSTKAEQQTLVAKVSLQQALITQAQAGVIAAESDRLRA--- 128

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q+ LT  + L  KN  SQ+D+++++     +   L E         R +   Y +   
Sbjct: 129 --QQQLTRSQKLKVKNYSSQDDVDERQAGFESAEAHLDEAKAALIAKRRELEVFYAQHVQ 186

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             AN ++                 + L + +       + +P +G I   +      Y Q
Sbjct: 187 ADANVVQ---------------ARAGLDLAKIQLADTQVRAPFSGVI-GKRGAMKGQYVQ 230

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q L  +VP     +I A     QIQ+++ G T  +    + D   K F  +I+ + P 
Sbjct: 231 PGQALYSLVP-DGAVWITANFKETQIQNMQPGQTVKISLDAFPD---KTFTGVIDSLSPA 286

Query: 374 ISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
              +         T  + +++ +I     L  S+    L  G  A V    ++ +LA
Sbjct: 287 SGAKFSLLPAENATGNFTKIVQRIPVRIRLDLSEVEARLVPGLSAVVKVDTRSVSLA 343


>gi|241206399|ref|YP_002977495.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860289|gb|ACS57956.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 404

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 89/267 (33%), Gaps = 16/267 (5%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L +   ++ +  L+   ++ +     A L   Q     ++       ++Q   +  +
Sbjct: 140 QNALDLAQAQIVTEQLSLQRIDAQIEGANASLVQAQAQKVALEAAVRGAEITQKRQSDLQ 199

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFADEMSK 279
                +  +L  +           N    +AN+  A     I     ++ + +       
Sbjct: 200 AKSVGTAADL--DNANIALDQAKANLAGGDANITAAQANITILQAQRKEAEGSVRSLEIS 257

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                +      + +P  G IV N+S    +     Q LM +VP  +  YI A     QI
Sbjct: 258 RDKAVRDLSFTVLKAPYDG-IVGNRSVQEGDLVSPGQRLMALVPV-RQLYIDANFKETQI 315

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVI----L 391
           QH+  G    V+   Y+D         +E I P      S       T  + +VI    +
Sbjct: 316 QHLVPGSKVNVQVDAYSDH---PIVGTVESISPASGSVFSMLPPENATGNFTKVIQRVPV 372

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAK 418
           +I     + ++  LR G    V    +
Sbjct: 373 RIALPQEALDSGRLRAGLSVVVDVDTR 399



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E ++  I    +G + K  V    ++  G  L T ++ +  + +DL +  I   +  +  
Sbjct: 100 EGDIATISPKVTGYVAKVNVVANQEVKAGDVLATLDNGDYQNALDLAQAQIVTEQLSLQR 159

Query: 113 -----EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                E +    +  +   +      R  ++           S      + +   +L   
Sbjct: 160 IDAQIEGANASLVQAQAQKVALEAAVRGAEITQKRQSDLQAKSVGTAADLDNANIALDQA 219

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +     N    +   ++L+A     +  +  ++
Sbjct: 220 KANLAGGDANITAAQANITILQAQRKEAEGSVRSLE 255


>gi|323136026|ref|ZP_08071109.1| secretion protein HlyD family protein [Methylocystis sp. ATCC
           49242]
 gi|322399117|gb|EFY01636.1| secretion protein HlyD family protein [Methylocystis sp. ATCC
           49242]
          Length = 397

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 84/272 (30%), Gaps = 26/272 (9%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +     +      L      + +++  R  +  K +   AL    + DL   +      
Sbjct: 88  RQRAEASLLQAAGDLARTTRNVGALFATRRQVCEKIASRAALRDRARHDLARYQQAATTG 147

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +VSQ  +      +     +LRE+  E   +   +N +                      
Sbjct: 148 SVSQQQVQNTRDQLAALEADLRESRAELHAIEARVNGVTP------------------AT 189

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                   +K         ++ + +P +G I   +        +    LM IVP     +
Sbjct: 190 HPDVEAARAKYLDAHIEYVRQQVRAPASGFIAK-RKAQVGQRVKPGDQLMTIVPLDH-LW 247

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIR--EKKFKAIIEKIDPIISQQDNNLQTQEYY 387
           I A +   +++ V+ G    +R   Y D          I+     + +    +  T  + 
Sbjct: 248 IEANLWENRLERVRPGQPVNIRVDLYGDSPRFHGTVDGIVPGSGSVFALLPPDNATGNFI 307

Query: 388 EVILKIT-DLAFSDNNIE---LRNGFPAEVLF 415
            ++ ++   +A   + IE   LR G    +  
Sbjct: 308 RIVQRVPVRIALRPDEIEKHPLRPGLSTNITI 339



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/179 (10%), Positives = 55/179 (30%), Gaps = 5/179 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            R +        ++++ G+     W +    +    S+       N++ + +  +GI+  
Sbjct: 12  ARRNLLLAGVGVVVALAGLFFGGKWLVK---DRFFVSTDNAFVTGNLIPVYADATGIVSD 68

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            +VE    + +G  L+  +       +      +     ++    +    +  K      
Sbjct: 69  VRVEETQSVKKGDVLMLLDRQRAEASLLQAAGDLARTTRNVGALFATRRQVCEKIASRAA 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             +     L  +  +  +T   V    + +    L      +R        +E + + +
Sbjct: 129 LRDRARHDLARY--QQAATTGSVSQQQVQNTRDQLAALEADLRESRAELHAIEARVNGV 185


>gi|260554926|ref|ZP_05827147.1| multidrug resistance efflux pump [Acinetobacter baumannii ATCC
           19606]
 gi|260411468|gb|EEX04765.1| multidrug resistance efflux pump [Acinetobacter baumannii ATCC
           19606]
          Length = 361

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 62/428 (14%), Positives = 128/428 (29%), Gaps = 90/428 (21%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGL--ITWS---ILLPIEISVSSSGEILNEDNVV 57
           H M +  K      LK+  ++ I  I+ L  I W    I LP  I  +    +  E +  
Sbjct: 9   HSMTEPPKLTKMQYLKKHWVMVIAFIVVLVSILWILKVIFLPSSIVKTDDARVDVEYS-- 66

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I    SG I++  +++   + +G  L                         ID      
Sbjct: 67  TIAPKVSGNIEEIYIKDHQTVKKGQLL-----------------------ARIDAR---- 99

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                            +  L +    Y    + +    ++   +   ++          
Sbjct: 100 ---------------DYQAALAEAESNYAKAQADLNEAMLAVERQPTVIR---------- 134

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             + E +   + A +   + +    + L    A S+    Q +  + +   +L  +  + 
Sbjct: 135 --ETEAQLRKVEAGIKLTKDNTARYEQLQALGAESRLITQQSKTTLTEQYADLDSSKEKV 192

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +    +N+   +   + A   +  +                    +       I +PI 
Sbjct: 193 IDAQYQLNQYKIQVQAKQAALKQAQAAL---------------DKAKLNLSYTEIRAPID 237

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I   +S +  N+     PLM +VP     Y+ A     +++ +K G   TV    Y  
Sbjct: 238 GMI-GQKSANVGNFVGAGNPLMVVVPLD-QVYVEANFREIELKQIKIGQPVTVYVDAYN- 294

Query: 358 IREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIE----LRNGF 409
               + K +++   P      S       T  + +++ ++        N      LR G 
Sbjct: 295 ---VELKGVVDSFSPSTGAFFSPISATNATGNFTKIVQRLPLRIKLLENQPDIKLLRPGL 351

Query: 410 PAEVLFTA 417
              V    
Sbjct: 352 SVVVSVDT 359


>gi|148264746|ref|YP_001231452.1| secretion protein HlyD family protein [Geobacter uraniireducens
           Rf4]
 gi|146398246|gb|ABQ26879.1| secretion protein HlyD family protein [Geobacter uraniireducens
           Rf4]
          Length = 368

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 93/306 (30%), Gaps = 30/306 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  ++ +   + +    R+ Q +             +   ++    ++ M       
Sbjct: 64  EAHIHSISARIPGIVRNVAVRDNQFVKKGDLIVELDPIDYQARVADATATMNMARNETSG 123

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
            +          SL +  L     DL   K LF K  V +  L++ E     + +E R+ 
Sbjct: 124 EHAKVDAARTAVSLAKVKLEQADTDLRRGKALFAKEVVPKEQLDRLETAYKVAVMEKRQA 183

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +     +  +                          A + ++    E       I 
Sbjct: 184 EETLRRAEAEVGLIGT-----------------GSKDAKVAQKKAQFDEAELNLSYTKIF 226

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G I   +S  + NY Q  QPLM +V      ++ A     Q+ HVK G        
Sbjct: 227 APADGYITR-KSVEAGNYIQPGQPLMALVKLEDS-WVTANYKESQLTHVKPGQKVEFNVD 284

Query: 354 HYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIEL 405
            Y       F+  ++ I                T  Y +V+    +KI     SD    L
Sbjct: 285 AYPGQT---FRGTVDSIMAGTGAAFSLLPPENATGNYVKVVQRIPIKIAVDRNSDPGHHL 341

Query: 406 RNGFPA 411
           R G   
Sbjct: 342 RIGMSV 347



 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 60/175 (34%), Gaps = 8/175 (4%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISV-SSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           A +  + +L++ G  G   W     I+     ++     E ++  I +   GI++   V 
Sbjct: 30  AGIFLLIILAVGGAFGFKWW-----IKGQTHITTDNAFVEAHIHSISARIPGIVRNVAVR 84

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +   + +G  ++  + I+    +     ++   R     E + +D       + +   E 
Sbjct: 85  DNQFVKKGDLIVELDPIDYQARVADATATMNMARNETSGEHAKVDAARTAVSLAKVKLEQ 144

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            +  L    GK       V    +  +  + K+ +   R         E +  L+
Sbjct: 145 ADTDL--RRGKALFAKEVVPKEQLDRLETAYKVAVMEKRQAEETLRRAEAEVGLI 197


>gi|242280990|ref|YP_002993119.1| PAS/PAC sensor protein [Desulfovibrio salexigens DSM 2638]
 gi|242123884|gb|ACS81580.1| putative PAS/PAC sensor protein [Desulfovibrio salexigens DSM 2638]
          Length = 583

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 87/252 (34%), Gaps = 37/252 (14%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +   R +LE     L +  +  ++D    K LFEK  + +N  +   + +  +   L  
Sbjct: 296 EVLKARRELEQARRTLNSSKAKTEED----KMLFEKGIIPRNQYDTSFQELKNNESRLVS 351

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +    +++L   +  Y E                   +   A+  +    L++   + T+
Sbjct: 352 SQETYRDVLNKGDHEYVEI-----------------ARMELANAETNYNTLKEKMSRSTV 394

Query: 293 LSPIAGTIV-------YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
            +P++G  +         +  +S     + QPL+ I        I AKV    I  ++ G
Sbjct: 395 TAPVSGVALRPNSKSGDAKEITSGMSVTEGQPLLSIASLEG-LSISAKVDELNINSLQLG 453

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
              TV    + D +    K  I  I      Q         +E  +++  L   D +  +
Sbjct: 454 QPVTVTGDAFPDHK---LKGEIAMISS----QAGGEGKVPTFETTIRLPHL-PKDVSKNV 505

Query: 406 RNGFPAEVLFTA 417
           R G  A +    
Sbjct: 506 RIGMTANMQVET 517


>gi|220926218|ref|YP_002501520.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
 gi|219950825|gb|ACL61217.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
          Length = 392

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 60/405 (14%), Positives = 129/405 (31%), Gaps = 77/405 (19%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
             +  L ++G +G++TW I+ P     + +  +    +   I     G +   +VEN   
Sbjct: 38  WALASLIVLGFVGVVTWHIIAPHPNVWTDNAYVRV--HYAAIAPRVPGQVTGVRVENNDV 95

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+  +D +    +   + ++   R  ++   +++       +  +   ++ E Q
Sbjct: 96  VKAGQVLIELDDRDYQVAVASAEANLARDRAAVENAAASIVRQGPLIEQAKALVKTAEAQ 155

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L      +    +K ++Y  ++   S+K +     S++ +R  L+   + L A  +  + 
Sbjct: 156 L-----SFSEADAKRYDYLATTGSGSIKTQQQADSSLHQSRASLDGAKAALEAAQAQLK- 209

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                                               I + +    + +    EA LE A 
Sbjct: 210 ------------------------------------ILQTQEASANASVRASEAQLEQAR 233

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                            TI +P+ G +         NY      
Sbjct: 234 L---------------------------NLSYTTIRAPVDGMVAQRGV-QVGNYVSSGTG 265

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM +VP S+  Y+ A     +++HV+ G  A +    Y    E     +        +  
Sbjct: 266 LMAVVPLSE-VYVEANYREVELKHVQAGQRARIHVDAYDIDLEGTVVGVPAATGATFATI 324

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVLFTAK 418
             N  T  + +++ ++        N      LR G   E     +
Sbjct: 325 QPNNATGNFTKIVQRLPVQIVIAPNQPLARLLRVGLSVETTIETQ 369


>gi|325843178|ref|ZP_08167864.1| efflux transporter, RND family, MFP subunit [Turicibacter sp. HGF1]
 gi|325489422|gb|EGC91792.1| efflux transporter, RND family, MFP subunit [Turicibacter sp. HGF1]
          Length = 478

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/355 (10%), Positives = 126/355 (35%), Gaps = 25/355 (7%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++++F V+ G  I  G PL           ++     +      ++  K+A +      +
Sbjct: 75  MVEEFFVKVGDAIKAGDPLAKISGEAIQKQLEDLNEQLTKANMALEQAKNAKELNILNNE 134

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                     ++  +       +  K  +  ++++         ++  + + ++   N++
Sbjct: 135 KSWNQVTQSSQEQYNSEKSVVESELKKLDEQLANIQTKKHEITQKINELEVTQVQANNEA 194

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             L    ++ +  L   + L +     +  L+  E+       ++ + I  + ++    +
Sbjct: 195 PDLEEEGTNPEILLNSDEELQQ----LRQQLSDLEQQEESVRAQINDAIARKNDIDWRRD 250

Query: 246 ELYDEANLEFANYLK-------EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           +   +   E ++  +       E+ + ++           +++ +++  E  T++S + G
Sbjct: 251 KEVQKEQQEASSNKQINDKTLIEMDQSIQLASMEVEKIQKEISKVKELSENNTLVSDVDG 310

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +     ++ +      +P++ I     +T +   V+   +  +++G    +    Y   
Sbjct: 311 IVTSLG-YTPNTMTSTDKPVVTIGTLDMVTAVIG-VSQNDVNKLEEGQVVQLEVNAYP-- 366

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             +K  A ++ I+ +     +N      Y+V +++     +     L  G     
Sbjct: 367 -GEKLMAKVKSINYV----PSNEGGSVVYKVTVELDSTERA-----LLEGMTVNA 411


>gi|156933304|ref|YP_001437220.1| hypothetical protein ESA_01116 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531558|gb|ABU76384.1| hypothetical protein ESA_01116 [Cronobacter sakazakii ATCC BAA-894]
          Length = 424

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 65/381 (17%), Positives = 112/381 (29%), Gaps = 92/381 (24%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +E ++   G I        + +PF G+IK+  V+ G ++     L      +    I L
Sbjct: 58  RLEQNIGLVGRIEAVRQ-QTLSAPFEGVIKEIMVQEGQRVAANQILAHINPEQI--QIQL 114

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           ++     L+     E   L   +N  DV+                       +       
Sbjct: 115 RQAQGDLLKAQ--RELHQLKNWSNSPDVVR--------------------ARRALKASQD 152

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           S+  +    L   + ++   +    +   L A L S Q+DL+           SQ++LN 
Sbjct: 153 SL-NATYANLRETQLLFKRGIVARMEVDSLEAQLRSQQQDLS----------ASQDELNV 201

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E        EL                    A L   N        L Q+QR       
Sbjct: 202 IELKGQGEEYEL--------------------ARLNLVNAQARFQMLLAQSQRQI----- 236

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQ--------SFSSSNYAQQSQPLMKIVPHSKLTYI 330
                        I +P AG IV                    Q  PL+ +V       +
Sbjct: 237 -------------ITAPFAGVIVRQSPMENSKKIVIQPGMPVNQGTPLLTLV-SLDHLQV 282

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
             KV    I  + +G    +    +     ++ +  +  I  + S   +      YY+VI
Sbjct: 283 VTKVEESDIHRIHEGMPVKITGDGF---VGEELEGHVSAI-AVQSDAADASGMSVYYDVI 338

Query: 391 LKITDLAFSDNNIELRNGFPA 411
           + +   +        R G  A
Sbjct: 339 ISVDTPSKGA-----RTGMSA 354


>gi|189460378|ref|ZP_03009163.1| hypothetical protein BACCOP_01015 [Bacteroides coprocola DSM 17136]
 gi|189432930|gb|EDV01915.1| hypothetical protein BACCOP_01015 [Bacteroides coprocola DSM 17136]
          Length = 294

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 112/360 (31%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IKK        + +G  LL  +D              +  R  +   ++AL      
Sbjct: 6   SGYIKKIYFTEHQSVKKGDTLLVLDD--------------REYRIRVMEAEAALKDAMAG 51

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             V++   ++ +     +                                        E 
Sbjct: 52  ATVIDATLQTTQNSASVY----------------------------------------EA 71

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + +   L+  +KD    +NL ++NA +   L Q E     +  +L     +QK  +  
Sbjct: 72  SIAEIEIRLAKLEKDRQRYENLLKRNAATPIQLEQIETEYEATRKKLEATKRQQKAAMSG 131

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I               KE+S   E  +       + L +         +L+P  G  +  
Sbjct: 132 I---------------KEVSNRRESTEAAIQRATAALEMARLNLSYTVVLAPCDGK-LGR 175

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     Y    Q +  I+P ++   I A     Q++++  G    +     +D   K+F
Sbjct: 176 RALEEGQYIGAGQSITYILPDTQKWVI-ANYKETQVENLHVGQEVRITVDAISD---KEF 231

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
              I  I           P  +   N ++ Q+   V +  T+L+  DN   L  G    V
Sbjct: 232 TGKITAISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTNLSSEDNE-RLAAGMMVVV 290


>gi|83648089|ref|YP_436524.1| multidrug resistance efflux pump [Hahella chejuensis KCTC 2396]
 gi|83636132|gb|ABC32099.1| Multidrug resistance efflux pump [Hahella chejuensis KCTC 2396]
          Length = 372

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/409 (10%), Positives = 119/409 (29%), Gaps = 65/409 (15%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL-----NEDNVVEIKSPFSGIIKKFQ 71
           ++ M   S+ G+ G   +             G++       E +V+ +    SG++ +  
Sbjct: 6   IRLMLFFSLAGVAGCGYYLWHA---------GKVSTDDAFVERDVIYLTPRVSGVLVEVL 56

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V +  ++  G  L   +       +      +   +  +   ++ L+             
Sbjct: 57  VSDNQKVATGDLLARIDPKPYEAELQSASARVAMQQAAMVKAQADLEAF----------- 105

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                                    ++ +    +  L ++      +   E+  + L A 
Sbjct: 106 -------------------------VARLEARKQDALAQVNVAKAEKQHHESNLARLDAQ 140

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           ++  ++D+   + L  +  VS+  L   +  +   + E              +   + + 
Sbjct: 141 IAQARRDVDRYERLAGRKQVSEQALEDAKTNLATLSAERETVKASIDVAASKVAAAHSQQ 200

Query: 252 NLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
               ++      +   + Q++       +         +   I +   G I   +     
Sbjct: 201 KTVASDERNIAVLRAAIGQSEAALKQAQADEARASLALQWTEIRATSNGWISRVEKH-PG 259

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           ++          +  +   +++A     QI  V+ G   +V    Y  +    F A +E 
Sbjct: 260 SFVSPQTNFA--IEVTGAAWVKANFKETQIGDVRVGDKVSVEVDAYPGVT---FSAKVES 314

Query: 370 IDPIISQQ----DNNLQTQEYYEVILKITDLAFSDN---NIELRNGFPA 411
             P    +         +  Y +V+ ++      D     ++L  G   
Sbjct: 315 FQPGTGSRFSLLPPENASGNYVKVVQRVPVKIIFDEVPDGVQLWPGMSV 363


>gi|300023644|ref|YP_003756255.1| secretion protein HlyD [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525465|gb|ADJ23934.1| secretion protein HlyD family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 434

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 54/433 (12%), Positives = 124/433 (28%), Gaps = 98/433 (22%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNED------- 54
                K   R  P  +    L  + G+     W+    I     + G  +          
Sbjct: 75  SKDASKPASRKKPIFIGIGALALMAGL-----WAGYHYI-----TVGRFIVSTDDAYVGV 124

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++  +    S  +    V +   +  G  L+  +D               + R  +D  K
Sbjct: 125 HMSMVSPKVSAYVADVPVADNQFVKGGDVLVRLDD--------------GDYRLALDQAK 170

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           S L   N      +   ++ E        +  ++ + V                      
Sbjct: 171 SKLATQNAAIATFDAQIKAAEAAAAQARAQIDASKANVIKT------------------- 211

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                                + D +    L  K+  ++  L+        +  +++ N 
Sbjct: 212 ---------------------EADFSRTNALTAKDYATKASLDAAIAARDSARAQVKANE 250

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++          +AN+   +  +E +  + +  +   ++ ++            I +
Sbjct: 251 AAIQSA---------DANIALLHAQREQATQVAKELQVAVEQAAR------DLSFTVIRA 295

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P  G I  N++    +Y   ++ L  I+P     Y+ A +   Q+  +  G  A V    
Sbjct: 296 PFDGII-GNKNVQVGDYVTPAKRLAAIIPLD-KVYVDANLKETQLGPIVVGQEADVEVDA 353

Query: 355 YADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIELRN 407
                    K  +  + P    Q         T  + +++ ++    ++  S+    LR 
Sbjct: 354 LGGT---VLKGKVVSVAPASGSQFSLLPPENATGNFTKIVQRVPVRIEVPASEAKGRLRP 410

Query: 408 GFPAEVLFTAKNT 420
           G    V    + T
Sbjct: 411 GLSVVVDIDTRTT 423


>gi|116073032|ref|ZP_01470294.1| Secretion protein HlyD [Synechococcus sp. RS9916]
 gi|116068337|gb|EAU74089.1| Secretion protein HlyD [Synechococcus sp. RS9916]
          Length = 445

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/443 (12%), Positives = 126/443 (28%), Gaps = 96/443 (21%)

Query: 23  LSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +++ G+ G    W +  P+   V   G ++  +N   + +   G +    V+ G ++ +G
Sbjct: 30  VALCGVGGLFGVWLLFWPVPTQVKGKGILIYPNNAGILNARAGGQVVDVAVKVGDRVRKG 89

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L+          + + +  ++  R ++   +   + LN +                  
Sbjct: 90  QVLMRL-------YLPVLERQLEQQRGNLAQLRRQNEELNARD----------------- 125

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                               R L      + +      D E + + L+A  S+   +L  
Sbjct: 126 -------------------VRRLSTAQAALDTTLAKLGDDEQRLAQLQATYSAKVSNLNW 166

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              L  +  V+          +  + +   E +      L  I     +A   F      
Sbjct: 167 ---LSRRAVVA---------PLSSAVVSAEEGLTGTSVQLDDIKIQRKQAITAFQQIELA 214

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           I  +    Q    D   ++ + E        + +   G ++  Q  +     +    L  
Sbjct: 215 IETEQLDRQFAIDDLNREIAVTEARIAYDGDVSAGRDGDVLDLQVIA-GQTIKIGDRLGT 273

Query: 321 IV-----------PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIE 368
           I            P   L  + A   P+  + +  G    V  P +    R    +  I 
Sbjct: 274 IGRAALHSKNRQQPVDDLMAV-AYFAPEDARRLPLGLPVEV-VPLWRQRGRFGGIEGTIR 331

Query: 369 KIDPIISQQDNNLQT-------------QEYYEVILKITDLAFSDNN-----------IE 404
            +  + + QD+   T                    + +   + S++              
Sbjct: 332 SVLSLPATQDDIATTIGNPQLAQDLLKDGPVMRAEIALDRDSRSEDGYRWTLSQGSGVFP 391

Query: 405 LRNGFPAEVLFTAKNTTLAQEII 427
           +R+G   +     +  +    II
Sbjct: 392 IRDGLTVDTFAYVEWRSPITYII 414


>gi|293375021|ref|ZP_06621314.1| efflux transporter, RND family, MFP subunit [Turicibacter sanguinis
           PC909]
 gi|292646359|gb|EFF64376.1| efflux transporter, RND family, MFP subunit [Turicibacter sanguinis
           PC909]
          Length = 478

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/355 (10%), Positives = 126/355 (35%), Gaps = 25/355 (7%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++++F V+ G  I  G PL           ++     +      ++  K+A +      +
Sbjct: 75  MVEEFFVKVGDAIKAGDPLAKISGEAIQKQLEDLNEQLTKANMALEQAKNAKELNILNNE 134

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                     ++  +       +  K  +  ++++         ++  + + ++   N++
Sbjct: 135 KSWNQVTQSSQEQYNSEKSVVESELKKLDEQLANIQTKKHEITQKINELEVTQVQANNEA 194

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             L    ++ +  L   + L +     +  L+  E+       ++ + I  + ++    +
Sbjct: 195 PDLEEEGTNPEILLNSDEELQQ----LRQQLSDLEQQEESVRAQINDAIARKNDIDWRRD 250

Query: 246 ELYDEANLEFANYLK-------EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           +   +   E ++  +       E+ + ++           +++ +++  E  T++S + G
Sbjct: 251 KEVQKEQQEASSNKQINDKTLIEMDQSIQLASMEVEKIQKEISKVKELSENNTLVSDVDG 310

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +     ++ +      +P++ I     +T +   V+   +  +++G    +    Y   
Sbjct: 311 IVTSLG-YTPNTMTSTDKPVVTIGTLDMVTAVIG-VSQNDVNKLEEGQVVQLEVNAYP-- 366

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             +K  A ++ I+ +     +N      Y+V +++     +     L  G     
Sbjct: 367 -GEKLMAKVKSINYV----PSNEGGSVVYKVTVELDSTERA-----LLEGMTVNA 411


>gi|218675010|ref|ZP_03524679.1| putative transmembrane efflux pump [Rhizobium etli GR56]
          Length = 416

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/330 (10%), Positives = 93/330 (28%), Gaps = 41/330 (12%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            S   ++ +I      +     +  V + +    ++ L     + +          ++SV
Sbjct: 95  TSQAQVQAYIVGIAPEVTGRVVEVGVADNSRVEADQVLFRIDPERYELAVSEAEAALASV 154

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            +S+      + +     + ++     LR   +   +       L ++   S+   +  +
Sbjct: 155 GQSIGASTASVDAAQAKLVQMQADRDNLRDQYARATE-------LVKRGVFSKARFDAAK 207

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
               ++   +     +       +    ++                          ++ L
Sbjct: 208 SAYDQAEASVSGAQADLAKAKEQLGPSGNDN-------------------PQLRAALAGL 248

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              +    + T+ +P AG +   Q  +        QP M  +  +   +I A      ++
Sbjct: 249 EKAQLDLVRTTVHAPSAGVVTNLQL-TIGKVVSAGQPAMTFI-DAGTIWINAAFKENSLE 306

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEK-ID----------PIISQQDNNLQTQEYYEV 389
            V  G  A + F              +   +           P I      +Q  + + V
Sbjct: 307 KVAVGNKADILFDALPGRLFPATVESVGFGVSQGNTDPNTGLPTIRNDSGWVQEAQRFPV 366

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            L I +         +R G  A V+    +
Sbjct: 367 RLVIKEAQLPKGG--IRYGSQATVVIYTGD 394



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 54/167 (32%), Gaps = 6/167 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
             S+ +   +  +V I    +G + +  V + S++     L   +       +   + ++
Sbjct: 92  TPSTSQAQVQAYIVGIAPEVTGRVVEVGVADNSRVEADQVLFRIDPERYELAVSEAEAAL 151

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF-----LGKYHSTCSKVFNYGIS 158
            ++   I    +++D    K   ++   ++  +Q          G +             
Sbjct: 152 ASVGQSIGASTASVDAAQAKLVQMQADRDNLRDQYARATELVKRGVFSKARFDAAKSAYD 211

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK-DLTMMKN 204
               S+      +           N +  LRA L+  +K  L +++ 
Sbjct: 212 QAEASVSGAQADLAKAKEQLGPSGNDNPQLRAALAGLEKAQLDLVRT 258


>gi|307152179|ref|YP_003887563.1| hypothetical protein Cyan7822_2310 [Cyanothece sp. PCC 7822]
 gi|306982407|gb|ADN14288.1| hypothetical protein Cyan7822_2310 [Cyanothece sp. PCC 7822]
          Length = 382

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 71/414 (17%), Positives = 148/414 (35%), Gaps = 68/414 (16%)

Query: 19  RMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R  L  I+ +IGL I+W I + +E  V   GE+   + V  I+ P   +I++  V+ G Q
Sbjct: 25  RAILCLILAVIGLAISWLIFVKVEPVVFLLGELQPIETVERIELPQDSVIEEIYVQPGEQ 84

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + QG  LL+F+   +   +                          K D LEK+ +   + 
Sbjct: 85  VQQGQELLSFDVANSFPKLK-------------------------KLDDLEKSLKKENKF 119

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L D       + S + N  I   +  + +                 K  L++ ++S  ++
Sbjct: 120 LQDV------SNSWINNDQIEGDFDDINLSP--------------QKIILVKNIISLLKE 159

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           + T+ K +FE  A     + Q E        E++     Q+  + +  +       + + 
Sbjct: 160 NQTIQKKIFEDKAKLLLKIRQGEDHESDIADEIKS----QQKAIIYQQKYLISIEEKLSE 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
               I   + +N+        K    +K ++   + SPI+G +      +          
Sbjct: 216 LQTRIKVIISENENFINQIEKKKEKYQKFKKNIFLNSPISGQVKEINIQNKR-------- 267

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            ++I+P  K       +  +  + + K     V   +            I  I   I   
Sbjct: 268 -LEILP-DKKLIAYLFIAYQDQKLIHKNMKLKVMVNNSEQNNNFLLTGQIILIGSDILPP 325

Query: 378 DNNLQTQEYY----EVILKITDLAFSDNNIELRNGFPAEVLFTA-KNTTLAQEI 426
           ++      +Y    ++ L+  ++   +  I L+ G P +V   + +  +L + +
Sbjct: 326 NDA---YPFYHLPVQISLETEEMTTKEQEIFLKPGIPVKVELPSPQKKSLLEVL 376


>gi|319408971|emb|CBI82630.1| multidrug resistance efflux pump VceA protein [Bartonella
           schoenbuchensis R1]
          Length = 354

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 89/313 (28%), Gaps = 18/313 (5%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            ++      +        E++     +       +F         SL+    R+ +    
Sbjct: 43  AYVQGDIAAIAPKLNGYIEEIAVKANQAVKKDDVLFRLESGDYQISLEQTKARLDTQQKT 102

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              ++ +    R++L   Q   T    +     ++     + +   Y S           
Sbjct: 103 LARIDAQIIAARSVLDDAQAQKTAASAIATNAQLTLQRATELKADHYVSQSNFDNAKSAY 162

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +  + ++    D         ++ +     + +             ++  +   + +P  
Sbjct: 163 EQAIANV-ARTDAQIAAAQANIRVLEAQRNEIESETKSLELMRDKAKRDLDSTILRAPFN 221

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I    + +        Q L  +VP     YI A     Q++++  G TA +    + +
Sbjct: 222 GVIGNLTAKTGDFVVN-GQRLAALVPIH-TLYIEANYKETQLKNIYSGQTAYISVDAFKN 279

Query: 358 IREKKFKAIIEKIDPII----SQQDNNLQTQEYYE------VILKITDLAFSDNNIELRN 407
                FK  +  I P      S       T  + +      V + I D A       +R 
Sbjct: 280 E---VFKGKVLSISPATGAVFSLLPPQNATGNFTKITQRIPVRISIPDDALKSG--RIRA 334

Query: 408 GFPAEVLFTAKNT 420
           G    V    +  
Sbjct: 335 GMSVLVKIDTRTR 347



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 54/169 (31%), Gaps = 8/169 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
            + ++  I    +G I++  V+    + +   L   E         +T   +D ++ ++ 
Sbjct: 45  VQGDIAAIAPKLNGYIEEIAVKANQAVKKDDVLFRLESGDYQISLEQTKARLDTQQKTLA 104

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGISSVYRS 163
            +   I   +S LD    +         + +  L      K     S+       S Y  
Sbjct: 105 RIDAQIIAARSVLDDAQAQKTAASAIATNAQLTLQRATELKADHYVSQSNFDNAKSAYEQ 164

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               + R  +               R  + S  K L +M++  +++  S
Sbjct: 165 AIANVARTDAQIAAAQANIRVLEAQRNEIESETKSLELMRDKAKRDLDS 213


>gi|209550991|ref|YP_002282908.1| secretion protein HlyD [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536747|gb|ACI56682.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 406

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 86/267 (32%), Gaps = 16/267 (5%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L     ++ +  L+   ++ +     A L   +     ++       ++Q   ++ +
Sbjct: 142 QNALDQAQAQIATEQLSLQRIDAQIEGANASLVQARAQKVALEAAVRGAEITQKRQSELQ 201

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFADEMSK 279
                +  +L  +           N    +AN+  A     I     ++ + +       
Sbjct: 202 AKSVGTAADL--DNANIALDQAKANLAGGDANITAAQANITILQAQRKEAEGSVRSLEIS 259

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                +      + +P  G IV N+S    +     Q LM +VP  +  YI A     QI
Sbjct: 260 RDKAARDLSFTVLKAPYDG-IVGNRSVQEGDLVSPGQRLMALVPV-RELYIDANFKETQI 317

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVIL 391
           QH+  G    V    Y+D         +E I P           +      T+    V +
Sbjct: 318 QHLVAGSKVNVHVDAYSDH---PVVGTVESISPASGSVFSLLPPENATGNFTKVIQRVPV 374

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAK 418
           +I     + ++  LR G    V    +
Sbjct: 375 RIALPQDALDSGRLRAGLSVVVDVDTR 401



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/206 (10%), Positives = 63/206 (30%), Gaps = 23/206 (11%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSP 62
           +R+    +  + +L+  G  G   W           ++G  +          ++  I   
Sbjct: 63  RRSPVLPIVALVILAGGGWYGYEWW-----------TNGRFMVSTDDAYIEGDIATISPK 111

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT-----EKSAL 117
            +G + +  V    ++  G  L T ++ +  + +D  +  I   +  +       E +  
Sbjct: 112 VTGYVARVNVVANQEVKAGDVLATLDNGDYQNALDQAQAQIATEQLSLQRIDAQIEGANA 171

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +   +      R  ++           S      + +   +L      +     N
Sbjct: 172 SLVQARAQKVALEAAVRGAEITQKRQSELQAKSVGTAADLDNANIALDQAKANLAGGDAN 231

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMK 203
               +   ++L+A     +  +  ++
Sbjct: 232 ITAAQANITILQAQRKEAEGSVRSLE 257


>gi|70730311|ref|YP_260050.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
 gi|68344610|gb|AAY92216.1| HlyD family secretion protein domain protein [Pseudomonas
           fluorescens Pf-5]
          Length = 431

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 58/384 (15%), Positives = 116/384 (30%), Gaps = 94/384 (24%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+I      V + +PF G ++   VE G ++  G  LL  +      L++++     +  
Sbjct: 64  GKIEP-QKTVVLTAPFEGNVQASLVEQGQRVEAGQVLLQMDP----GLVEIQSREALSTL 118

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                    L   NN   V       R  Q+                             
Sbjct: 119 LKARRTVQELQDWNNGAVVTRARRTLRNSQM----------------------------- 149

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
                                   L++ ++ L   +NLF++  + +N+LN QE+      
Sbjct: 150 -----------------------SLANTERKLRESQNLFQRGIIPRNELNDQEQQAQMQR 186

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           L+L     E +  L      Y +                   +    +   K   L K  
Sbjct: 187 LDLAAAQSELQQALNQGTGEYRQI-----------------AEMELTNATVKYDALRKLL 229

Query: 288 EQKTILSPIAGTIV--------------YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           E K +++P AG +V               N    + +     Q L  +  + +   I +K
Sbjct: 230 EHKDVVAPFAGIVVPPPNGGAGPNTAGAANGPVQTGSRLSPGQVLFGLA-NIEQLKIVSK 288

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V+   I  + +G    +    +   R    + +++ +  +    +      ++  V L +
Sbjct: 289 VSELDINQLHQGQRVEILGDGFDGER---LEGVVDIVSSLALPNETAGAGAQF-PVTLSV 344

Query: 394 TDLAFSDNNIELRNGFPAEVLFTA 417
             L+       +R G  A +    
Sbjct: 345 PKLSREQLQ-RVRLGMSARLTIVT 367


>gi|109897071|ref|YP_660326.1| secretion protein HlyD [Pseudoalteromonas atlantica T6c]
 gi|109699352|gb|ABG39272.1| secretion protein HlyD [Pseudoalteromonas atlantica T6c]
          Length = 363

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 95/307 (30%), Gaps = 14/307 (4%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E++   ++ +    +      R E L     ++      +     S     L      + 
Sbjct: 34  EETDNAYIKSDNISIRAEISGRIETLAVQENQHVRQGQLLVKINASDYQAKLAQANAELS 93

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                 ++ + + SL    +   + ++   K   ++  ++       ++  + S  +L+ 
Sbjct: 94  VAEAALVNAQQQISLQDKKIDEAKANIDAAKAEVKRGELNLARFQVLDKQSFDSKQQLQN 153

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +         +           +   +    +      +   S++   +    +  I
Sbjct: 154 TEADVAVAKAKQAQAEAAYAAAQQMFAV-LDAQKQSAAANISSAESQIAYAQSQLAKTDI 212

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           L+P  G +    + +     Q +  L+ +VP  ++  + A     QI H+  G    +  
Sbjct: 213 LAPSDGIVGNLGART-GGLVQPTMTLLYLVPLPQVYVV-ANYKETQIGHMTIGQPVKLTV 270

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEY----YEVILKITDLAFSDNNIE 404
               D+   +F  ++  I P    +      +  T  +      V ++I     S+    
Sbjct: 271 DAQDDV---EFTGVVASISPATGSEFSLLPKDNATGNFNKIVQRVPVRIHVTGPSEYLHL 327

Query: 405 LRNGFPA 411
           LR G   
Sbjct: 328 LRPGLSV 334



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 17/167 (10%), Positives = 53/167 (31%), Gaps = 12/167 (7%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            + + I++  SG I+   V+    + QG  L+     +    +      +      +   
Sbjct: 43  SDNISIRAEISGRIETLAVQENQHVRQGQLLVKINASDYQAKLAQANAELSVAEAALVNA 102

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLD---FLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +  +   + K D  +   ++ + ++      L ++     + F+           + + +
Sbjct: 103 QQQISLQDKKIDEAKANIDAAKAEVKRGELNLARFQVLDKQSFDSKQQLQNTEADVAVAK 162

Query: 171 MRSIYLNRLD---------LENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +                 L+ +     A +SS +  +   ++   K
Sbjct: 163 AKQAQAEAAYAAAQQMFAVLDAQKQSAAANISSAESQIAYAQSQLAK 209


>gi|265993423|ref|ZP_06105980.1| LOW QUALITY PROTEIN: HlyD family secretion protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|262764293|gb|EEZ10325.1| LOW QUALITY PROTEIN: HlyD family secretion protein [Brucella
           melitensis bv. 3 str. Ether]
          Length = 332

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 90/289 (31%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 56  IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 115

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++   L     +  +   +I+ L          
Sbjct: 116 TMARVQKLHETRFVAQSELDNAQSALDQARARLAGVDAQIASAKANISVL---------- 165

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                     +   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 166 -----EAQYNEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 219

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P     
Sbjct: 220 IAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAV 275

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++IT    +  + ++R G    V    +
Sbjct: 276 FSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDTR 324



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 66/257 (25%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +   +  +    +D     +       +
Sbjct: 24  VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 83

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 84  RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSALDQ 143

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+  +       +   S+L A  +        ++ L    A                
Sbjct: 144 ARARLAGVDAQIASAKANISVLEAQYNEAASSTKSLE-LARDKAARDLSFTSLRAPFDGV 202

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +     + I  L     L      KE      +   T    +  +   +  
Sbjct: 203 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETQLAHIKVGETAHIYVDAIDGTKFD 262

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 263 GKVASI-APASGAVFSL 278


>gi|95929227|ref|ZP_01311971.1| secretion protein HlyD [Desulfuromonas acetoxidans DSM 684]
 gi|95134725|gb|EAT16380.1| secretion protein HlyD [Desulfuromonas acetoxidans DSM 684]
          Length = 343

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/359 (12%), Positives = 103/359 (28%), Gaps = 70/359 (19%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V+ G QI QG  L   ED + T  + + +      +  +             
Sbjct: 51  SGRLSELHVDEGDQIKQGQQLAVLEDSDETLAVAVAEAQRDYQQTVL------------- 97

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                     ++V     +   R  +  +   R+          
Sbjct: 98  --------------------------NEVLAGSRTQQIREAQAAINEARAAE-------- 123

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +A L   Q D      L+E+   S+  L   +  +  +   +++           
Sbjct: 124 --QASQAELEQAQLDEQRFSQLYEEGGTSRRTLELYQTALKTAQQHVKQARAAVGQARER 181

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++   + +  E           +   Q              +      + +P+ GTI+  
Sbjct: 182 LSLAVEGSRNEA----------ILSAQAQVKVAEQTTAQARQQLTYTHLNAPLDGTILT- 230

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +      Y Q    +          + R  V+   +  ++ G  A +R   + +     F
Sbjct: 231 RPAEVGEYVQPGSVIFT-AAVLDEVWARVYVSETDLGRIQLGQKAVIRSDSWPER---DF 286

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILK---ITDLAFSDNNIELRNGFPAEVLFTAKN 419
             ++  I     + +   ++ + Y   +       +  ++   EL+ G P E     ++
Sbjct: 287 NGVVTYIS---DEAEFTPKSVQTYRERINFMYRVKITLANPQHELKPGMPVEGQILLES 342


>gi|304397006|ref|ZP_07378885.1| secretion protein HlyD family protein [Pantoea sp. aB]
 gi|304355155|gb|EFM19523.1| secretion protein HlyD family protein [Pantoea sp. aB]
          Length = 384

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/354 (11%), Positives = 103/354 (29%), Gaps = 73/354 (20%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +    ++ I+ I+GL  W     IE +  +      E + V I    SG + K  V++  
Sbjct: 48  IILAVVVVIMLIVGLWFWLSTRNIETTDDA----FTEGDAVTIAPKASGYVVKLLVKDNQ 103

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++ +G  L+  +  +     +     +      +                        + 
Sbjct: 104 RVKKGDLLVEIDPSDNRAQREQANAQLGLAVAQL---------------------HQAQA 142

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           QL     +Y +   +       +    L  +    R                        
Sbjct: 143 QLALSKVQYPAQRDQALADQAKAEANMLNAQADYRRQ----------------------- 179

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                      +    +      +R +  ++ +LR    + ++    +     E   + A
Sbjct: 180 -----------RGVDPRA---TSQRNIDSASAQLRSAQAQLQSAKAQV-----EVASQVA 220

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             +++   ++E  Q+      ++L+  +       + +P  G I            Q   
Sbjct: 221 LQIRQQETNVEARQQQVEQAKAQLSTADLNLSYTQVRAPYDGFITKRNV-QLGTLVQAGS 279

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
            L  +V      ++ A     Q++ +  G    +    + D++    +  ++ I
Sbjct: 280 SLFSLVSPD--IWVTANFKESQLERMNPGDKVKISVDAWPDMK---LEGHVDSI 328


>gi|319637976|ref|ZP_07992740.1| HlyD family secretion protein [Neisseria mucosa C102]
 gi|317400621|gb|EFV81278.1| HlyD family secretion protein [Neisseria mucosa C102]
          Length = 384

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 81/261 (31%), Gaps = 22/261 (8%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +      L  + + L          L + K        ++  L++  R   +      + 
Sbjct: 130 VAQAEAGLAGQQAALNKTAQDKASALAVSKANQAAIDNARAQLDRARREWQRIQAVSADA 189

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRD--------LEQNQRTFADEMSKLTILEK 285
           + +             EA L+ A     +++          E  Q   A+  + L + ++
Sbjct: 190 VSQSSRDAAQTAVKQAEAGLKQAQEQYAVAQQNIINTGVGREGAQAGIANAQALLDLAKQ 249

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 I +P +G  +   S            LM +VP  +     A +    + +VK G
Sbjct: 250 DLGHTVIYAPASGK-LGEVSVKQGQLVSAGTQLMSVVPPERWII--ANIKETDMANVKIG 306

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYY----EVILKITDLA 397
            +A+V          K F   + +I    + +      +  T  +      + +KI   A
Sbjct: 307 QSASVSIDALG---GKAFSGKVAEISLATASEFSLIKADSGTGNFVKIAQRIAVKIVFDA 363

Query: 398 FSDNNIELRNGFPAEVLFTAK 418
              +   L  G  AEV    K
Sbjct: 364 GQQDLERLAPGMSAEVNIATK 384



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 53/166 (31%), Gaps = 18/166 (10%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI- 110
              +V  +     G ++K  V +   +  G PL+  +       +   +  +   +  + 
Sbjct: 86  VRGSVTAVSPRVGGYVQKVLVRDFDNVKAGQPLVEIDPAPYRAKVAQAEAGLAGQQAALN 145

Query: 111 -------------DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY----HSTCSKVF 153
                           ++A+D    + D   + ++  +    D + +       T  K  
Sbjct: 146 KTAQDKASALAVSKANQAAIDNARAQLDRARREWQRIQAVSADAVSQSSRDAAQTAVKQA 205

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             G+        +    + +  + R   +   +  +ALL   ++DL
Sbjct: 206 EAGLKQAQEQYAVAQQNIINTGVGREGAQAGIANAQALLDLAKQDL 251


>gi|153011541|ref|YP_001372755.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563429|gb|ABS16926.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 411

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 89/289 (30%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +          +++  ++L        +     L          A+L++ Q 
Sbjct: 135 IFQLDAGDYQIALDEAEAKLATQKQTLIRIKAETDAAQAILLQANADKQAATAVLTNAQN 194

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q DL+  +  + ++  ++     +  +   +I  L          
Sbjct: 195 TIARVQKLHETRFVAQADLDTAQSSLDQARAKVAGGDAQVASAKANIEVL---------- 244

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                +    +   T            +     ++ +P  G I  N +    +     Q 
Sbjct: 245 -----NAQYSEADSTMKSLELARDKAARDLSFTSLRAPFDGVI-GNLAGKKGDLVSPGQK 298

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP ++  YI A     Q+  ++ G TA +        +   F   +  I P     
Sbjct: 299 IAALVPVNE-LYIDANFKETQLAKIRTGETAHIYVDAIDGTK---FDGKVASIAPASGAV 354

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++I     +  + ++R G    V    +
Sbjct: 355 FSLLPPENATGNFTKIVQRVPVRIMIPKEALESGKIRAGLSVVVDIDTR 403



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/257 (11%), Positives = 72/257 (28%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC--- 108
            + ++  I    +G I+   V    Q+  G  +   +  +    +D  +  +   +    
Sbjct: 103 VQGDIASIAPKVTGYIENIPVVANQQVKAGDVIFQLDAGDYQIALDEAEAKLATQKQTLI 162

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLKM 166
            I  E  A   +  + +  ++A  +      + + +        F     + +   SL  
Sbjct: 163 RIKAETDAAQAILLQANADKQAATAVLTNAQNTIARVQKLHETRFVAQADLDTAQSSLDQ 222

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              ++          +    +L A  S     +  ++ L    A                
Sbjct: 223 ARAKVAGGDAQVASAKANIEVLNAQYSEADSTMKSLE-LARDKAARDLSFTSLRAPFDGV 281

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +  +  + I  L     L      KE      +   T    +  +   +  
Sbjct: 282 IGNLAGKKGDLVSPGQKIAALVPVNELYIDANFKETQLAKIRTGETAHIYVDAIDGTKFD 341

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 342 GKVASI-APASGAVFSL 357


>gi|126641818|ref|YP_001084802.1| RND family drug transporter [Acinetobacter baumannii ATCC 17978]
          Length = 251

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 85/266 (31%), Gaps = 29/266 (10%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L ++    +S   + ++  +     +A L+  +K+    ++L +   +++ +    +
Sbjct: 6   EAALGVQQQNEKSARSSIIEANSGVVAAQADLARLKKEFERYQDLLKDGVITRQNFEGIQ 65

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                +  +L +           +  L                    Q         + L
Sbjct: 66  SQYLTAQAQLSKAQAAVNAAEAQLGSLQ---------------ASRAQLLADIQSSHANL 110

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            + +       ++SP++G I         +       LM I+P +   Y++A     QI+
Sbjct: 111 NLYQVDLASSKVVSPVSGKIGSLAI-QKGSRVSPQTRLMAIIPENS-LYVQANFKETQIE 168

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDL 396
            +  G    ++   Y  +    F   IE   P           +  T  + +V+ +I   
Sbjct: 169 KMHIGQKVKLKLDAYPSLN---FTGKIESFSPASGATFSLMPPDNATGNFNKVVQRIPVR 225

Query: 397 AFSDNNIEL---RNGF--PAEVLFTA 417
              D++  +   + G    A V    
Sbjct: 226 IAIDSSPHIDLVKPGMSVSATVDLRT 251


>gi|282891187|ref|ZP_06299690.1| hypothetical protein pah_c048o011 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498880|gb|EFB41196.1| hypothetical protein pah_c048o011 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 284

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 82/252 (32%), Gaps = 20/252 (7%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           + + ++DL  + S L   L   + D      L     + +     Q      +   +  N
Sbjct: 40  VDIRQVDLGFRVSGLVEKLFFDEGDEVHAGTLV--GVLDKKIYEDQVAQAEANVKSISAN 97

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +   + + +   EL    ++   + L +   +            + L + +       + 
Sbjct: 98  LANAEKLYKRRQELLPSGSVSQED-LDDAYSNWNVLTANLEQSQASLRVAQDNLFYTEMY 156

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G I+  +     +  ++S P+   V      +IRA V+   +  +     A V   
Sbjct: 157 APTDGFILT-RIREPGSVVKESDPVCT-VSIKSPLWIRAYVSEGNLGKIYPNMPAEV--- 211

Query: 354 HYADIRE-KKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            Y D      +   I  I P+      + +   L+T   Y + + + D         LR 
Sbjct: 212 -YTDTPTMPVYHGHIGFISPVSEFTPKTVETTQLRTDLVYRLRVIVDDPDRY-----LRQ 265

Query: 408 GFPAEVLFTAKN 419
           G P  V     +
Sbjct: 266 GMPVTVRLKLGD 277



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 39/100 (39%), Gaps = 4/100 (4%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG+++K   + G ++  GT +   +     D +   + ++K++  ++    +  + L  +
Sbjct: 52  SGLVEKLFFDEGDEVHAGTLVGVLDKKIYEDQVAQAEANVKSISANL----ANAEKLYKR 107

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              L  +    +E L D    ++   + +     S     
Sbjct: 108 RQELLPSGSVSQEDLDDAYSNWNVLTANLEQSQASLRVAQ 147


>gi|299136511|ref|ZP_07029694.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX8]
 gi|298601026|gb|EFI57181.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX8]
          Length = 413

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 54/434 (12%), Positives = 127/434 (29%), Gaps = 57/434 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGII----GLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                  P   KR  +L ++ I+    G   W      +     + +   + ++ ++ + 
Sbjct: 16  APEAEPAPKKSKRGIVLVVVLILAIAAGFYFWRSTFTED-----TDDAQVDGDLYQVSAR 70

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G +    V +   +  G P+   +  +    + L + +        D E++ ++    
Sbjct: 71  VAGQVVHVDVTDNQLVKAGDPIAEVDPKDF--EVALAQANANLASAQADLEQARVNLPIT 128

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             +V                              +S+    +      +     N    +
Sbjct: 129 HVNV---------------------------RTSVSTSGSDVLGSQASLSQAQANVAAAQ 161

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           ++    +A     Q D+     L  K+ +S+   +   +    +   L E     K    
Sbjct: 162 SRVDQAQANAVKAQLDVDRYTPLVAKDVISKQQFDAAVQQAAATKAALAEAERSVKAQQD 221

Query: 243 HINELYDEANLEFAN----------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            ++          A            +K     ++      A   +K+   +       I
Sbjct: 222 QVSFAQQHVAQSQAQAQQSAQNAPGQVKAQQARIQAAIAEVAQAQAKVDQAQLNLGYTKI 281

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++PI+G +               Q L+ +VP     ++ A     Q++ +K G    ++ 
Sbjct: 282 VAPISGIVSKKNVD-VGENLSVGQDLLTVVPLDN-LWVTANFKETQLKQMKVGQEVDLKV 339

Query: 353 PHYADIRE-KKFKAIIEKIDPIISQQDNNLQTQEYYE------VILKITDLAFSDNNIEL 405
                 +   + + I       +S       T  Y +      V +  T+L   + +  L
Sbjct: 340 DALGGRKFKGELQQIGGATGSRLSLFPPENATGNYVKVVQRIPVRINFTNLEAENKDHAL 399

Query: 406 RNGFPAEVLFTAKN 419
           R G       T K 
Sbjct: 400 RPGMSVTPDVTVKQ 413


>gi|150007333|ref|YP_001302076.1| putative multidrug resistance protein [Parabacteroides distasonis
           ATCC 8503]
 gi|149935757|gb|ABR42454.1| putative multidrug resistance protein [Parabacteroides distasonis
           ATCC 8503]
          Length = 356

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 106/359 (29%), Gaps = 85/359 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+ + +    + QG  LL  +D E    +              + E + +D     
Sbjct: 67  SGYIKEVRFKEHQYVHQGDTLLILDDREYRIKLK-------------EAEAALIDA---- 109

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                                  S  +  + + + + N    + 
Sbjct: 110 -------------------------------------QGSQDVLRSGIETSHTNIAVQDA 132

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +  +A L   ++D    + L ++ +V +    Q +     +    +  + ++K     
Sbjct: 133 NIAEAKAKLWQLEQDYHRFERLLKEESVPEQQYEQSKAAFEAAQARYQALVEQKKAAFSQ 192

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E   +     A  L++                + L +         I +P  G +   
Sbjct: 193 FTETSKKTTGAEAAILRK---------------EADLDLARLNLSYTVITAPYDGHV-GR 236

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     Y Q  Q +  +V   K  +I A     QI H+  G    ++         K F
Sbjct: 237 RTLEPGQYVQAGQTISYLV-RDKDKWITANYKETQIPHIYIGQKVRIKVDALP---GKIF 292

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +  I           P  +   N ++ Q+   V + + +L+  D    LR G   E
Sbjct: 293 NGEVTAISDATGSKYSLVPTDNSAGNFVKVQQRIPVRIDLENLSQEDTQY-LRAGMMVE 350


>gi|116253525|ref|YP_769363.1| efflux pump protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258173|emb|CAK09274.1| putative efflux pump protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 364

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 104/313 (33%), Gaps = 28/313 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  L      +       E + +       S  S  F   +      L  +  ++ +
Sbjct: 50  QADMVGLTTDVSGIVDQINVHENEAVKAGQVLFSLRSDSFKIALDGAKAQLGAQRNQIMN 109

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +  +      + +  +A L  +Q      +NL    + +Q+  ++ +  +  +  ++   
Sbjct: 110 LKASYQQSLAEITQAQADLPYYQDQFDRQQNLVNNGSATQSAYDEAKHNLEAAQQKVAVA 169

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             E    L  +    D+   E   YL+                 S++   ++  +   + 
Sbjct: 170 KAEAATTLAQLGGNADQPAEENPLYLQ---------------AKSQVDNAQRELDHSVVK 214

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +    +    +Y Q SQ    +V  +   +I A     ++ +VK G TA +   
Sbjct: 215 APFDGIVTNVNALQVGSYLQASQQAFSLV-ATDRLWIAASPKETELTYVKPGQTAEIYVD 273

Query: 354 HYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            Y  +    +K  +E I P          +Q       +    + ++++ +  +D    L
Sbjct: 274 TYPGVT---WKGKVESISPASGSSFSLLPAQNTTGNWVKVVQRIPMRVS-IEDTDGKPPL 329

Query: 406 RNGFPAEVLFTAK 418
           R G    V     
Sbjct: 330 RVGMSTVVDVETG 342



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 57/166 (34%), Gaps = 12/166 (7%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGI+ +  V     +  G  L +          D  K+++   +  +  +++ +  L   
Sbjct: 61  SGIVDQINVHENEAVKAGQVLFSL-------RSDSFKIALDGAKAQLGAQRNQIMNLKAS 113

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y          +  L  +  ++    + V N   S+   +       + +        + 
Sbjct: 114 YQQSLAEITQAQADLPYYQDQFDRQQNLVNNG--SATQSAYDEAKHNLEAAQQKVAVAKA 171

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +++   A L  +         L+ +   +++ ++  +R +  S ++
Sbjct: 172 EAATTLAQLGGNADQPAEENPLYLQ---AKSQVDNAQRELDHSVVK 214


>gi|229591409|ref|YP_002873528.1| putative periplasmic protein [Pseudomonas fluorescens SBW25]
 gi|229363275|emb|CAY50377.1| putative periplasmic protein [Pseudomonas fluorescens SBW25]
          Length = 389

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLP--------------IEISVSSSGEILNED 54
           +KR  PA    + +  +I II +  W +L P              IE SV++ G +    
Sbjct: 1   MKRPRPARRALLAIACLIPIIAVAAWQVLPPGRDALTTVAVTRGNIENSVTALGTLQPRR 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ +  SG I+K  VE G  + +G  L+  +       +D  + +I+NL+  +  +K
Sbjct: 61  YV-DVGAQASGQIRKIHVEAGDHVQEGQLLVEIDPSTQKAKLDASRYAIENLKAQLQEQK 119

Query: 115 SALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    KY     L     +REE +     +  +T ++V  F   I     SL+    
Sbjct: 120 AQHELARQKYQRQQRLAAGNATREEDVQTAKAELSATQARVDMFQAQILQAQASLRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 EL 181



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 64/195 (32%), Gaps = 5/195 (2%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            + ++     + +    S  + ++ +E    +    L       T    L       +N 
Sbjct: 52  ALGTLQPRRYVDVGAQASGQIRKIHVEAGDHVQEGQLLVEIDPSTQKAKLDASRYAIEN- 110

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
             + +    K+  EL    ++++  L   N   +E        L      ++  Q     
Sbjct: 111 -LKAQLQEQKAQHELARQKYQRQQRLAAGNATREEDVQTAKAELSATQARVDMFQAQILQ 169

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAK 333
             + L   E       I +P+ GT+V   +          Q  PL+  +       + A+
Sbjct: 170 AQASLRSDEAELGYTRIYAPMTGTVVAVDAR-VGQTLNAQQQTPLILRIAKLSPMTVWAE 228

Query: 334 VTPKQIQHVKKGYTA 348
           V+   I HVK G TA
Sbjct: 229 VSEADIGHVKPGMTA 243


>gi|317127999|ref|YP_004094281.1| efflux transporter RND family, MFP subunit [Bacillus
           cellulosilyticus DSM 2522]
 gi|315472947|gb|ADU29550.1| efflux transporter, RND family, MFP subunit [Bacillus
           cellulosilyticus DSM 2522]
          Length = 442

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 60/390 (15%), Positives = 128/390 (32%), Gaps = 87/390 (22%)

Query: 35  SILLPIEISVSSSGEILNEDNVV---------EIKSPFSGIIKKFQVENGSQILQGTPLL 85
           + + P+EI +   G + +E  +           + S  +G + +  + NG  + +G  L+
Sbjct: 43  AAIFPVEIGMVEKGILSSESRISGNVMAEKHMPVLSMLTGEVTEVHISNGDIVEKGDILI 102

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                +    I   +  ++    + ++ KS          + E+  +  E QL      Y
Sbjct: 103 ELNATDMELNISQARAGLQAAEANYNSAKS----------MREQGIKQAELQLEQAEDAY 152

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +   GI S                   LDL+     L+ +           + L
Sbjct: 153 DMLDDIINGDGIESE----------------QDLDLDKIPEELQEVF---------TRIL 187

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
              N +        ER +  S  E+     E        N   + A         EIS +
Sbjct: 188 MSNNNMP------TERDL--SQAEMAVKQAEIALEQAQSNAQVEAAEASVKQ--AEISLE 237

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           + ++Q+T                   I +P++G +    +           PLM++V   
Sbjct: 238 MAESQKT----------------NAVITAPMSGEVTNFNTI-VGETVSPQAPLMQLVKMD 280

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           +   +R  V    + +++      +  P Y     K ++ +++ I  +  +Q  +     
Sbjct: 281 EP-IVRIDVNESMLPNLEVDQEINIFIPSYN----KTYEGVVKYISIMPGEQSRS----- 330

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            Y V     ++   + + +LR G  A+ + 
Sbjct: 331 -YPV-----EIGIVNPDHDLRIGMHAQAVL 354


>gi|253565087|ref|ZP_04842543.1| HlyD family secretion protein [Bacteroides sp. 3_2_5]
 gi|251946552|gb|EES86929.1| HlyD family secretion protein [Bacteroides sp. 3_2_5]
          Length = 302

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 58/359 (16%), Positives = 109/359 (30%), Gaps = 87/359 (24%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNK 123
           G IK+ +      +  G  LL  +D              +  R  + D E + +D L +K
Sbjct: 14  GYIKEVRFTEHQYVHAGDTLLILDD--------------REYRIRLKDAEAALMDALGSK 59

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                      +V N GI              R+  +N    E 
Sbjct: 60  ---------------------------EVLNSGI--------------RTSGVNVAVQEA 78

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +   A LS  + +L     L +K AVSQ D    +     +       + +++     
Sbjct: 79  NIAETLAHLSQQEAELNRYTRLLKKQAVSQQDYELAKANFEATRARYNALLRQKEAAQSQ 138

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            +E    +    AN L++                + L +         + +P  G     
Sbjct: 139 YSETSKRSTGAEANILRK---------------EADLEMARLNLSYTVVTAPYDGY-TGR 182

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     + Q  Q L  +V  +   ++ A     QI H+  G    ++   ++      F
Sbjct: 183 RTLEPGQFVQGGQTLSYLVRGNDK-WVTANYKETQIAHIYIGQKVRIKVDAFSGRT---F 238

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +  I           P  +   N ++ Q+   V + + D +  +    LR G   E
Sbjct: 239 HGTVTAISEATGSKYSLVPTDNSAGNFVKVQQRIPVRIDLNDASPEEMEC-LRAGMMVE 296


>gi|78063038|ref|YP_372946.1| HlyD family secretion protein [Burkholderia sp. 383]
 gi|77970923|gb|ABB12302.1| Secretion protein, HlyD family [Burkholderia sp. 383]
          Length = 373

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/363 (11%), Positives = 99/363 (27%), Gaps = 82/363 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V +   +  G PL+  +       +   +V++      +D  +          
Sbjct: 77  GYVTDVYVRDNQAVKAGDPLVRLD-------VRQYQVALAQSLATVDARR---------- 119

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                  +      +   + N    + +
Sbjct: 120 -------------------------------------ADIARAEADISQQHANLDQADAQ 142

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + + R        + T    L    A +   +            +L+    +    L   
Sbjct: 143 AKVSRINAQHASDEYTRYAPLAATGAETHERV-----------ADLKSTRDQAAATLAAN 191

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N     A  + A++    +  L+Q +       +     +   +   + S +AG +  ++
Sbjct: 192 NASIAAARTQIASF----TAQLQQARAQLEAAQASAAQAQLDLDNTIVRSTLAGRV-GDR 246

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     Y Q    L+ +VP   +  + A     QI +++ G +  +      D       
Sbjct: 247 TVRVGQYVQPGTRLLTVVPVDAIYLV-ANFKETQIGNMRIGQSVELHVDALPD---GALS 302

Query: 365 AIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +++   P        +  +      T+    V ++I   A +     L  G    V   
Sbjct: 303 GVVDSFAPGTGAQFALLPPENATGNFTKIVQRVPVRIRLAANARAQRMLLPGLSVTVDVD 362

Query: 417 AKN 419
            ++
Sbjct: 363 TRS 365


>gi|308070611|ref|YP_003872216.1| membrane-fusion protein [Paenibacillus polymyxa E681]
 gi|305859890|gb|ADM71678.1| Membrane-fusion protein [Paenibacillus polymyxa E681]
          Length = 445

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/405 (13%), Positives = 115/405 (28%), Gaps = 69/405 (17%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +   +V+   Q+ +G  L+T + ++    I+  K  I      I   K  L   + K
Sbjct: 54  GGRVNTIEVKEEQQVKKGDVLMTLDPVDLDLQIEKLKTDIAQADVKIKQAKDGLQNQSEK 113

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKV----FNYGISSVYRSLKMKLTRMRSIYLNRL 179
               EK  +   +         +              I +  +SL   LT + +   N  
Sbjct: 114 ISNSEKQGQLDIQAAQAGESLLNQGTRAEDIVRQKLAIEAAQQSLDAALTGVETAKRNAE 173

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL--------- 230
             +   +  +  L   + +   ++ L++  A ++ +++  +  +  + + L         
Sbjct: 174 IAQKTVASRQQALDLAKVNYNRIQALYDAGAGTKAEMDNAKNQLDNAQIALDTAKDQVEI 233

Query: 231 ------------------------------RENIHEQKNMLRHINELYDEANLEFANYLK 260
                                              E++   R   E   EA  + +   K
Sbjct: 234 SNNQITAASKQSDIAKNGIAQQQTALDKMEAGATAEERQQARIKTEKAKEALTQTSQTRK 293

Query: 261 EISR-----DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           ++       DL   Q+       +L  LE  R +  + +   G +               
Sbjct: 294 DVKNSEYNVDLLAQQKQALSV--QLKTLELQRGRMVLKASTDGKVARI-VPKMGEIVSTG 350

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--- 372
                I   +   Y    V    I   K G   T           K  +  +  I     
Sbjct: 351 ATGAVI--ETNQLYYDIYVGEDSISQFKAGGNVTSHVVALD----KDVQGKVRYITSAPQ 404

Query: 373 ---IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
              +   +D  L     ++V + +   +      EL  G   EV+
Sbjct: 405 YTNMRMSRDKGLSDISSFQVRVDLQRTS------ELLPGMTVEVV 443


>gi|218461834|ref|ZP_03501925.1| probable protein secretion protein, HlyD family [Rhizobium etli Kim
           5]
          Length = 342

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 105/313 (33%), Gaps = 28/313 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +      +      RE + +       S  +  F   +      L ++  ++ +
Sbjct: 28  QADMVGVTTDVSGIVNEINVRENEAVKAGQVLFSLRTDSFKIALDGAKAQLGVQRNQIMN 87

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +  +      + +  +A L  +Q+     +NL    + +Q+  ++ +  +  +  ++   
Sbjct: 88  LKASYQQSLAEITQAQADLPYYQEQFDRQQNLVNNGSATQSAYDEAKHNLEAAQQKVTVA 147

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             E    L  +    D+   E   YL+                 S +   ++  +   + 
Sbjct: 148 KAEAATTLAQLGGSADQPIEENPLYLQ---------------AKSNVDNAQRELDHSVVK 192

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +    +    +Y Q SQ    +V  +   +I A     ++ +VK G TA +   
Sbjct: 193 APFDGIVTNVNALQVGSYLQASQQGFSLV-ATDHLWIAASPKETELTYVKPGQTAEIYVD 251

Query: 354 HYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            Y  +    +K  +E I P          +Q       +    + ++++ +  +     L
Sbjct: 252 TYPGVT---WKGKVESISPASGSSFALLPAQNTTGNWVKVVQRIPMRVS-IEDTQGKPPL 307

Query: 406 RNGFPAEVLFTAK 418
           R G    V     
Sbjct: 308 RVGMSTVVDVETG 320


>gi|241206052|ref|YP_002977148.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859942|gb|ACS57609.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 413

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 103/313 (32%), Gaps = 28/313 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  L      +       E + +       S  S  F   +      L  +  ++ +
Sbjct: 99  QADMVGLTTDVSGIVDQINVHENEAVKTGQVLFSLRSDSFKIALDGAKAQLGAQRNQIMN 158

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +  +      + +  +A L  +Q      +NL    + +Q+  ++ +  +  +  ++   
Sbjct: 159 LKASYQQSLAEITQAQADLPYYQDQFDRQQNLVNNGSATQSAYDEAKHNLEAAQQKVTVA 218

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             E    L  +    D+   E   YL+                 S +   ++  +   + 
Sbjct: 219 KAEAATTLAQLGGNADQPAEENPLYLQ---------------AKSNVDNAQRELDHSVVK 263

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +    +    +Y Q SQ    +V  +   +I A     ++ +VK G TA +   
Sbjct: 264 APFDGIVTNVNALQVGSYLQASQQAFSLV-ATDHLWIAASPKETELTYVKPGQTAEIYID 322

Query: 354 HYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            Y  +    +K  +E I P          +Q       +    + ++++ +  ++    L
Sbjct: 323 TYPGVT---WKGKVESISPASGSSFSLLPAQNTTGNWVKVVQRIPMRVS-IEDTEGKPPL 378

Query: 406 RNGFPAEVLFTAK 418
           R G    V     
Sbjct: 379 RVGMSTVVDVETG 391


>gi|206562070|ref|YP_002232833.1| efflux system transport protein [Burkholderia cenocepacia J2315]
 gi|198038110|emb|CAR54058.1| efflux system transport protein [Burkholderia cenocepacia J2315]
          Length = 374

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/416 (12%), Positives = 126/416 (30%), Gaps = 65/416 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
               R    +   +  +  + + G   W++   IE +  +        +VV + S  SG 
Sbjct: 13  ARFSRRQLIAAGVVLAVIALAVFGWHWWTVGRFIEGTDDAY----VRADVVTVSSRVSGY 68

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V++   + +G  L+  +D +    +D  + ++      +  E++A   L+     
Sbjct: 69  VAQVAVDDNQPVKRGDVLVRLDDRDYRAKVDDAQAAVAAAEATLQAEQAAASTLD----- 123

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                                      ++          +  ++
Sbjct: 124 ------------------------------------------AQIGQQRSQIAQADADAA 141

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             RA  +    D T  K L  ++A S     Q      K+  EL       +        
Sbjct: 142 AARAEAARRDADATRYKQLLAESAASGQRWEQAHADALKARAELARAGAAVR-------- 193

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  +         ++ +  + Q +   A   +KL + +   +   I +   G+I   ++ 
Sbjct: 194 VQTDQQTVLQRRREQSTAAIAQARARLAAAQAKLALAQLDLDHTVIRATRDGSI-GQRAV 252

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFKA 365
            +  Y +   PL+ +VP S +  + A     Q+  +  G    +    Y       +   
Sbjct: 253 RAGQYVEVGMPLLAVVPLSDVYVV-ANFKETQLGAMHDGQPVEIDVDTYSGHTLHGRVIG 311

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTAK 418
           +        +    +  T  + +++ +I     +      + LR G         +
Sbjct: 312 LAPGSGAQFALLPPDNATGNFTKIVQRIPVKIRVDAPPAGVVLRPGMSVIARVDTR 367


>gi|37519915|ref|NP_923292.1| hypothetical protein gll0346 [Gloeobacter violaceus PCC 7421]
 gi|35210907|dbj|BAC88287.1| gll0346 [Gloeobacter violaceus PCC 7421]
          Length = 442

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/386 (14%), Positives = 110/386 (28%), Gaps = 81/386 (20%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               +   V +SG +        +    +G I +  V+ G Q+ QG  +   E       
Sbjct: 48  ATTNLGQQVQASGLVQPI-RKTNLSPRQAGRIGRLLVDEGRQVKQGELVAQMES------ 100

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             L +  ++     +   ++ L                                      
Sbjct: 101 -RLPEAQVRQAEASLARAQAEL-------------------------------------- 121

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
               + +    +   +R      L  E       A L    ++L   + L  + A SQN 
Sbjct: 122 ----LQKRRGARPEEIREAQARLLSAEAAVRQGAARLERTGEELARYRRLAGEGATSQNA 177

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L+       ++   L     + +   + +  L     +E          ++ Q +   A 
Sbjct: 178 LSDYVNREREAAANLAGQRSQLEAQAQVLARLRKGTRIE----------EIRQAEAGVAL 227

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKL 327
             ++L       E+  + +P AG I   +     +Y                 IV     
Sbjct: 228 AQAQLDYFRTQLEETRVYAPFAGVISR-RFAQQGDYVTPSTAASTSDGASSTSIVELVSG 286

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + AKV    +  +  G    +R   Y       FK  +  + P   +++N        
Sbjct: 287 LEVEAKVPEASLAQIYPGQAVQIRTDAYPGA---VFKGRVRLVTPRAVREENVTT----- 338

Query: 388 EVILKITDLAFSDNNIELRNGFPAEV 413
            + +K+T         +LR G   +V
Sbjct: 339 -IRVKVT---LLSGQGQLRPGLNVKV 360


>gi|288960723|ref|YP_003451063.1| hypothetical protein AZL_a09880 [Azospirillum sp. B510]
 gi|288913031|dbj|BAI74519.1| hypothetical protein AZL_a09880 [Azospirillum sp. B510]
          Length = 426

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/340 (12%), Positives = 99/340 (29%), Gaps = 60/340 (17%)

Query: 34  WSILLPIEISVSSSGEILNEDNVV-EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           WSI+  I   V+  G ++N    +    SP SG +       G  + +G  +        
Sbjct: 57  WSIVGSIPTYVNGPGLLINSGGRIYSTLSPGSGRLGALNARIGDMVQEGQVIARI----- 111

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                                             +    E +     D + +      + 
Sbjct: 112 ----------------------------------VHDDLEQQHRNAEDTVAERRHEVDRQ 137

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
             +  + V +       R +++   R     +   L        + L   + L  +  V+
Sbjct: 138 IAFAATEVEQKTAALGRRRKALATIREAARQREQAL-------GRKLADEEALLTERVVT 190

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  + Q  +   +++ E    + E  N +  ++    +        +++    L + +R 
Sbjct: 191 RQSVLQTRQAWNQASQE----VAEIANQIAQLDNEELDLRFRADQRVRDAENALGEAERR 246

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A       I E  R Q  I +P +G +   Q+ +     Q  + ++ I        +  
Sbjct: 247 LAQ------IGETRRMQTDIRAPASGRVNEIQANA-GALVQHGENILSIETQGNGLQLLM 299

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIRE-KKFKAIIEKID 371
                Q   +K G    +  P      E      ++  + 
Sbjct: 300 FADQNQGDRLKPGMEVRIS-PANTQREEDGTLLGVVSFVS 338


>gi|319957824|ref|YP_004169087.1| secretion protein hlyd family protein [Nitratifractor salsuginis
           DSM 16511]
 gi|319420228|gb|ADV47338.1| secretion protein HlyD family protein [Nitratifractor salsuginis
           DSM 16511]
          Length = 385

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 59/397 (14%), Positives = 131/397 (32%), Gaps = 48/397 (12%)

Query: 20  MTLLSIIGIIGLITWSILLPIE---ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           + +L ++GI  ++ +  L P E     V+ +G I  + ++V + + + G I    V++G 
Sbjct: 11  LLVLILVGIAAVLIYLKLHPKELPANLVAGTGRI--DGDLVNLNTKYPGRIVSLNVDDGV 68

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G  +      E        +  I      +  ++  L     K   L         
Sbjct: 69  PVKNGMLVARLSSKEFEAQKQSLEDQIAAKNKELKAKEIELSINETKIPQL--------- 119

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                                      L      +++      +LEN  +  RAL+   +
Sbjct: 120 ---------------------------LHKAQAALKAKESQLQELENSIASQRALVEQDR 152

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +DL  M+ L+ +  + ++ L +           L+    ++K +L+ I     + +   A
Sbjct: 153 RDLERMQKLYAQKLIEKHKLEEIRLKYDVDHNALQALDDKRKQLLQAIAIAKSDLSDAIA 212

Query: 257 NYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                  +   +   ++  A   +    +E   E+ T+ SP+ G  V   + +       
Sbjct: 213 AQKSLDAMREGVAALRKGIAALEASKAQVEAMIEELTLKSPLTGFTVEKIANT-GEVIGA 271

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
             P+  +V   +  Y++  V   +   +K    A +    + D       A + +I    
Sbjct: 272 GMPVATLV-APESLYLKIFVDTIENGKIKLHDKAEIFLDAWPDR---PIPAEVVRIAQKA 327

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
                 +  +      +    L     +  L+ G PA
Sbjct: 328 EFTPKEVSVRSDRIQRVFAVHLKPLKPDPLLKLGLPA 364


>gi|298375320|ref|ZP_06985277.1| multidrug resistance protein [Bacteroides sp. 3_1_19]
 gi|301310666|ref|ZP_07216605.1| putative multidrug resistance protein [Bacteroides sp. 20_3]
 gi|298267820|gb|EFI09476.1| multidrug resistance protein [Bacteroides sp. 3_1_19]
 gi|300832240|gb|EFK62871.1| putative multidrug resistance protein [Bacteroides sp. 20_3]
          Length = 356

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 106/359 (29%), Gaps = 85/359 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+ + +    + QG  LL  +D E    +              + E + +D     
Sbjct: 67  SGYIKEVRFKEHQYVHQGDTLLILDDREYRIKVK-------------EAEAALIDA---- 109

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                                  S  +  + + + + N    + 
Sbjct: 110 -------------------------------------QGSQDVLRSGIETSHTNIAVQDA 132

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +  +A L   ++D    + L ++ +V +    Q +     +    +  + ++K     
Sbjct: 133 NIAEAKAKLWQLEQDYHRFERLLKEESVPEQQYEQSKAAFEAAQARYQALVEQKKAAFSQ 192

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E   +     A  L++                + L +         I +P  G +   
Sbjct: 193 FTETSKKTTGAEAAILRK---------------EADLDLARLNLSYTVITAPYDGHV-GR 236

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     Y Q  Q +  +V   K  +I A     QI H+  G    ++         K F
Sbjct: 237 RTLEPGQYVQAGQTISYLV-RDKDKWITANYKETQIPHIYIGQKVRIKVDALP---GKIF 292

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +  I           P  +   N ++ Q+   V + + +L+  D    LR G   E
Sbjct: 293 NGEVTAISDATGSKYSLVPTDNSAGNFVKVQQRIPVRIDLENLSQEDTQY-LRAGMMVE 350


>gi|332717139|ref|YP_004444605.1| Multidrug resistance efflux pump [Agrobacterium sp. H13-3]
 gi|325063824|gb|ADY67514.1| Multidrug resistance efflux pump [Agrobacterium sp. H13-3]
          Length = 422

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 84/265 (31%), Gaps = 16/265 (6%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +L+    ++R+  L+   ++ +     A           + +      ++Q    + +  
Sbjct: 152 ALEQADAQIRTEELSLKRIDAQIIGGEAAQEQAVAQKGALDSALRGAEITQKRATELQAK 211

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFADEMSKLT 281
              +      +  +        N +  EA +  A    E+     E+ + T         
Sbjct: 212 DVGTVA--ASDSAQVALDQARANVVAGEAAISSAKANVELLRAQREEAESTIRSLQLSKD 269

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
              +      + +P  G I      +  +     + L  +VP ++  YI A     Q+  
Sbjct: 270 KAARDLAFTVLKAPYDGVIGNLAVQT-GDLVSVGKRLASLVPLNE-LYIDANFKETQLAR 327

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDP----IISQQDNNLQTQEYYEVILKIT-DL 396
           V  G    V    + D      +  ++ I P    + S       T  + +VI ++   +
Sbjct: 328 VVPGSKVRVHVDAFDDET---IEGTVQSISPGSGSVFSMLPPENATGNFTKVIQRVPVRI 384

Query: 397 AFSDNNI---ELRNGFPAEVLFTAK 418
            FS  ++    LR G    V    +
Sbjct: 385 VFSKEDLAKHNLRAGLSVVVDVDTR 409



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 100/317 (31%), Gaps = 41/317 (12%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEI 59
           K  KR+    +  + LL+  G  G   W     I+      G  +          ++  I
Sbjct: 68  KKKKRSPLLPIFAIALLAGAGWYGYNWW-----ID------GRFMVSTDDAYIQGDIAVI 116

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDT 112
               SG I K  V    ++  G PL+T +D        +    I  +++S+K +   I  
Sbjct: 117 APKVSGYIAKVNVVENQEVKAGDPLVTLDDGDYRIALEQADAQIRTEELSLKRIDAQIIG 176

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            ++A +    +   L+ A   R  ++                    S   +L      + 
Sbjct: 177 GEAAQEQAVAQKGALDSAL--RGAEITQKRATELQAKDVGTVAASDSAQVALDQARANVV 234

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +        +    LLRA     +  +  ++ L +  A         +         L  
Sbjct: 235 AGEAAISSAKANVELLRAQREEAESTIRSLQ-LSKDKAARDLAFTVLKAPYDGVIGNLAV 293

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +  ++ + +  L     L        I  + ++ Q       SK+ +     + +TI
Sbjct: 294 QTGDLVSVGKRLASLVPLNEL-------YIDANFKETQLARVVPGSKVRVHVDAFDDETI 346

Query: 293 ------LSPIAGTIVYN 303
                 +SP +G++   
Sbjct: 347 EGTVQSISPGSGSVFSM 363


>gi|226312474|ref|YP_002772368.1| efflux system [Brevibacillus brevis NBRC 100599]
 gi|226095422|dbj|BAH43864.1| putative efflux system [Brevibacillus brevis NBRC 100599]
          Length = 444

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/349 (12%), Positives = 102/349 (29%), Gaps = 75/349 (21%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V+ G  + +G  +   +  E    +   + ++   + +++             
Sbjct: 93  GTVSQILVKKGDTVKKGQVIGKLDQTEAQLKLRQAEAALAVAKANLE------------- 139

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                  T  ++ N  +    ++                   + 
Sbjct: 140 -----------------HSNKMGTSGELANSQLKQAEQT-----------------FASV 165

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              +   L+  Q +    K LFE+ A+S+ +L   E    ++  + +  + + +  L + 
Sbjct: 166 KRTMEQGLTLAQANYNRSKKLFEEKALSKGELENAENAYLQAKNQYQSQLDQAQTALINA 225

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               + A+         + +   +             I     E   I S I G +   Q
Sbjct: 226 RSQVNTADKNGRVTQASVQQGQVEV-----------DISRNALENTLIKSTIDGIVTDIQ 274

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                +     +P+  ++ +     ++  V+ K +   KKG    ++ P     +  K  
Sbjct: 275 V-QEGDTINPQKPVATVI-NLDPMIVKVNVSEKSLASFKKGTQLNLQVP----SQNIKVN 328

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             I  +    + Q             L   ++   +    L  G  AEV
Sbjct: 329 GSITYVGLKAADQS-----------KLFPVEIEVPNPKGTLLPGMKAEV 366


>gi|218247922|ref|YP_002373293.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 8801]
 gi|218168400|gb|ACK67137.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           8801]
          Length = 463

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/339 (10%), Positives = 101/339 (29%), Gaps = 50/339 (14%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +   + V    S  +G I +  V+ G  + +G  L+  +  +  + +     +++  +
Sbjct: 59  GTLEARERVNLAPSRTNGRIVRIFVKEGDVVSRGQKLVEIQPYQEKEDVRAAIGNLQVAQ 118

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +                                        +V               
Sbjct: 119 ADL----------------------------------------RVAEAEYRQREAERDQA 138

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND----LNQQERIV 223
             ++     N    E      +A  +  +++    K L+E  AVS+ D    L+Q  R +
Sbjct: 139 QAQVEQARANVARAEADVQDAQAEFTLAEQNYPRSKFLYETGAVSKGDETRGLDQAIRNL 198

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                +L+  +  +      +    D         +++   +++  +        +L   
Sbjct: 199 DTRQAQLKSRLQIRDAEKAALQAAIDNFRAS-QKRVEQSFANIDSAKSAIVRAQGQLGST 257

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            +T +   + +PI G +         +     + +  +   +++  +   +  +    ++
Sbjct: 258 SETLDYNFLTAPINGVVGSFIDKKVGDNVNVGEGITTLT-DNQVFNLNVGIPTENRNRLR 316

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           +G    +             +  I  I P++ Q    +Q
Sbjct: 317 QGLPVEI----INPDGTPGVRGQITYIAPLVEQNAQAIQ 351


>gi|29348203|ref|NP_811706.1| putative multidrug resistance protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340106|gb|AAO77900.1| putative multidrug resistance protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 363

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 63/417 (15%), Positives = 129/417 (30%), Gaps = 96/417 (23%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSG--EILNEDNVVEIKSPF------SGI 66
             L+R  ++  +  + +I W +   IEI     G  +    ++    +         SG 
Sbjct: 21  RKLRRWQIIVSLFGVAVIVWGV---IEIVFLFLGYKQTETSNDAQIEQYVSPVNLRASGY 77

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I K       Q+ +G  LL  +D          K+ +      +   ++    +N     
Sbjct: 78  INKIYFTEHQQVRKGDTLLVLDD-------REYKIRVMEAEAALKDAQAGATVINATLQT 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +      +  + +                                              
Sbjct: 131 TQTTASVYDASIAE---------------------------------------------- 144

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +   L+  +KD    +NL ++NA +   L Q       +  +L     +++  L  +N 
Sbjct: 145 -IEIRLAKLEKDRQRYENLVKRNAATPIQLEQITTEYEATFKKLEATRRQREAALSGVN- 202

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                         E+S   E  +       + L +         +L+P  G  +  +S 
Sbjct: 203 --------------EVSHRRENTEAAIQRATAALEMARLNLSYTVVLAPCDGK-LGRRSL 247

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
               +    Q +  I+P ++   I A     QI++++ G    +       I +K+F   
Sbjct: 248 EEGQFITAGQCITYILPDTQKWII-ANYKETQIENLRIGQEVAITVDA---ISKKEFTGK 303

Query: 367 IEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +  I           P  +   N ++ Q+   V +  TDL+  DN+ +L  G    V
Sbjct: 304 VTAISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTDLSKEDND-KLAAGMMVVV 359


>gi|240851010|ref|YP_002972410.1| multidrug resistance protein VceA [Bartonella grahamii as4aup]
 gi|240268133|gb|ACS51721.1| multidrug resistance protein VceA [Bartonella grahamii as4aup]
          Length = 364

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 82/266 (30%), Gaps = 14/266 (5%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +L      + +     L ++ + +   + L   +        +     +S   + + ++ 
Sbjct: 98  ALDQTEAHLNTQKKTLLRIDAQITAAHSALDDAKAQKAAASAIATNAQLSLKRVTELKKN 157

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            Y    ++ +     +  + ++N    +     AN    +     + +            
Sbjct: 158 RYAPQSDVDDAKSAYEQAIANVNRADAQIAAARANIRV-LEAQRSEIESQTKSLELSREK 216

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            ++  +   I +P  G I    + +        Q L  +VP     YI A     Q+Q++
Sbjct: 217 AQRDLDSTIIRAPFDGVIGNLTAKTGDFVVN-GQRLAALVPIH-ALYIEANYKETQLQNI 274

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKIT 394
             G  A +    +   +++ F   +  I P           Q      T+    + ++I+
Sbjct: 275 HAGQKAYIAIDAF---KKEFFTGKVLSISPATGAVFSLLPPQNATGNFTKIVQRIPVRIS 331

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNT 420
                  N  +R G    V    +  
Sbjct: 332 IPEEVLKNGHIRAGMSVSVKVDTRTK 357



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 51/157 (32%), Gaps = 19/157 (12%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           G I+K  ++    + +   L   ++        +T   ++ +K ++  +   I    SAL
Sbjct: 68  GYIEKIAIKANQVVKKDDVLFYLDNGDYQIALDQTEAHLNTQKKTLLRIDAQITAAHSAL 127

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGISSVYRSLKMKLTR------ 170
           D    +         + +  L      K +    +       S Y      + R      
Sbjct: 128 DDAKAQKAAASAIATNAQLSLKRVTELKKNRYAPQSDVDDAKSAYEQAIANVNRADAQIA 187

Query: 171 -----MRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                +R +   R ++E+++  L       Q+DL   
Sbjct: 188 AARANIRVLEAQRSEIESQTKSLELSREKAQRDLDST 224


>gi|197286904|ref|YP_002152776.1| multidrug efflux protein [Proteus mirabilis HI4320]
 gi|194684391|emb|CAR46058.1| putative multidrug efflux protein [Proteus mirabilis HI4320]
          Length = 366

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 104/334 (31%), Gaps = 28/334 (8%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                +      ++      KS +    ++ +  +     R E + +   K      +  
Sbjct: 43  SDARYQTTDNAYIKADSTILKSRMTGFISQINKEDYQVVKRGEVIAEINKKEQILNRQAA 102

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L      ++   LN   L N+       ++  ++   + K+L    A++Q
Sbjct: 103 LAEYQKAQLALDNLTEEIKEYQLNIEKLANRYQASVIDVTQAKRSPMLRKDLINSGAITQ 162

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +    +  + +         +E     + +  L  +  +  A       +D+ Q Q   
Sbjct: 163 QNYLDAQSDLQRLMKLQSAAKNEWDQAKQALVLLKSQEKIRLAQ------KDIAQTQYQ- 215

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                     E      TI +P    +   +     +       ++ + P + +  I A 
Sbjct: 216 --------QAETELSYATIKAPFDAQLNKIKVN-IGSLVTAGSEIVTLTPINDVYII-AN 265

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD----NNLQTQEYYEV 389
           +   QI+ V+   +  ++   +       F   +  I    S +      +  +  + +V
Sbjct: 266 LKETQIKKVQPEQSVAIKVDAFP---TDVFSGKVRYIGAQSSGESALIPADNASGNFTKV 322

Query: 390 I----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +    + IT  + + +  +LR G   +V     +
Sbjct: 323 VQRIPVYITLNSDNRHLAKLRAGMSVQVKIDTDS 356


>gi|299065722|emb|CBJ36896.1| putative multidrug resistance transport transmembrane protein
           [Ralstonia solanacearum CMR15]
          Length = 390

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/371 (11%), Positives = 95/371 (25%), Gaps = 83/371 (22%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++V +    SG +++  V N   +  G  LL  +  E           +      ++   
Sbjct: 77  DIVTVAPKVSGYVEQVDVANNQAVRAGQRLLRIDPREYAA-------QLAQYLAQVEAAN 129

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           ++ D    +    + A      QL         T S+   Y                   
Sbjct: 130 ASADNARAQLATQKAAIAQARAQLQSAEHDAQFTASQTQRYA------------------ 171

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                                        +L    A +++ L+  +    ++    +   
Sbjct: 172 -----------------------------SLVASGAETRDRLSTLQNQAAQARANAQAQR 202

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                    I  L  +                 Q +       ++  + E       + +
Sbjct: 203 AALTKATLEIASLQAQLR---------------QAEAQAKTARAQAAVAEVNLAATELRA 247

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
              G +  +Q  +   +      LM +VP     YI A     Q+  ++ G    +    
Sbjct: 248 STDGRVGDSQVRA-GQFVSAGTRLMSVVPTH--LYITANFKETQLGRMRIGQPVHIHVDA 304

Query: 355 YADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIELRN--- 407
           + D      +  +E + P    Q         T  + +++ ++      D    L+    
Sbjct: 305 FPDE---AIEGHVESLSPGTGAQFSLLPPQNATGNFIKIVQRVPVRIALDVTDRLKPLLA 361

Query: 408 -GFPAEVLFTA 417
            G    V    
Sbjct: 362 AGMSVTVDVDT 372


>gi|221212393|ref|ZP_03585370.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD1]
 gi|221167492|gb|EED99961.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD1]
          Length = 372

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/365 (10%), Positives = 89/365 (24%), Gaps = 86/365 (23%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V +   +  G PL+                     R  +   + ALD  N   
Sbjct: 76  GYVTDVYVRDNQPVKAGDPLV---------------------RLDVRPYQVALDQANATV 114

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D         E ++           ++     I++ + S                     
Sbjct: 115 DARRADIARAEAEISQQRANLEQAQAQAKVSQINARHAS--------------------- 153

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                        +      L    A +   + + +    ++   L  N          I
Sbjct: 154 ------------DEYARYAPLAATGAETHERVAELKSARDQALATLAANDAAIAAARTQI 201

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                                L+Q +       +         +   + + + G +  ++
Sbjct: 202 AS---------------FGAQLQQARAQLEAAQASAAQSRLDLDNTIVRATLDGRV-GDR 245

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +     Y Q    L+ +VP   +  + A     QI  ++ G    +      D       
Sbjct: 246 TVRVGQYVQPGTRLLTVVPVDAIYLV-ANFKETQIGRMRVGQPVELHVDALPDDT---LS 301

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDNNIELRNGFPAEVL 414
            +++   P    Q         T  + +      V ++I     + +   L  G    V 
Sbjct: 302 GVVDSFAPGTGAQFALLPPENATGNFTKIVQRVPVRIRIAPNERARH--MLLPGLSVTVD 359

Query: 415 FTAKN 419
              ++
Sbjct: 360 VDTRS 364


>gi|160884042|ref|ZP_02065045.1| hypothetical protein BACOVA_02016 [Bacteroides ovatus ATCC 8483]
 gi|237718849|ref|ZP_04549330.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293371895|ref|ZP_06618299.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CMC 3f]
 gi|298480143|ref|ZP_06998342.1| multidrug resistance protein [Bacteroides sp. D22]
 gi|156110384|gb|EDO12129.1| hypothetical protein BACOVA_02016 [Bacteroides ovatus ATCC 8483]
 gi|229451981|gb|EEO57772.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292633141|gb|EFF51718.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CMC 3f]
 gi|298273952|gb|EFI15514.1| multidrug resistance protein [Bacteroides sp. D22]
          Length = 363

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 68/427 (15%), Positives = 138/427 (32%), Gaps = 95/427 (22%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPI-----EISVSSSGEILNEDNV 56
           H    K +K+     L+R  +   +  + +I W ++  I          +S +   E  V
Sbjct: 13  HQEKAKKMKK-----LRRWQIAISLFGVAIIVWGVIEVICLFLNYSQTETSNDAQIEQYV 67

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I    SG I K       ++ +G  LL  +D          K+ +      +   ++ 
Sbjct: 68  SPINLRASGYIDKIYFTEHQEVHKGDTLLVLDD-------REYKIRVMEAEAALKDAQAG 120

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              +N   +  +      +  + +                                    
Sbjct: 121 ATVINATLNTTQTTASVYDASIAE------------------------------------ 144

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                      +   L+  +KD    +NL ++NA +   L Q       +  +L     +
Sbjct: 145 -----------IEVRLAKLEKDRKRYENLVKRNAATPIQLEQIVTDYEATRKKLEATKRQ 193

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +K  L  ++E+            + ++ +    + T A EM++L           +++P 
Sbjct: 194 KKAALSGVDEV----------SYRRMNTEAAIQRATAALEMARLN-----LSYTVVIAPC 238

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G  +  +S     +    Q +  I+P ++   + A     QI+++  G    V     +
Sbjct: 239 DGK-LGRRSLEEGQFISAGQTITYILPDTQKWIV-ANYKETQIENLHIGQEVFVTVDAIS 296

Query: 357 DIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           D   K+FK  +  I           P  +   N ++ Q+   V +  TDL+  DN   L 
Sbjct: 297 D---KEFKGKVTSISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTDLSKEDNE-RLA 352

Query: 407 NGFPAEV 413
            G    V
Sbjct: 353 AGMMVVV 359


>gi|116253917|ref|YP_769755.1| HlyD secretion protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258565|emb|CAK09669.1| putative HlyD secretion protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 403

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 87/267 (32%), Gaps = 16/267 (5%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L +   ++ +  L+   ++ +     A L   Q     ++       ++Q   +  +
Sbjct: 139 QNALDLAQAQIVTEQLSLQRIDAQIEGANASLVQAQAQKVALEAAVRGAEITQKRQSDLQ 198

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFADEMSK 279
                +  +L  +           N    +AN+  A     I     ++ + +       
Sbjct: 199 AKSVGTAADL--DNANIALDQAKANLAGGDANITAAQANITILQAQRKEAEGSVRSLEIS 256

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                +      + +P  G IV N+S    +     Q LM +VP  +  YI A     QI
Sbjct: 257 RDKAVRDLSFTVLKAPYDG-IVGNRSVQEGDLVSPGQRLMALVPV-RQLYIDANFKETQI 314

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVIL 391
           QH+  G    V+   Y+D         +E I P           +      T+    V +
Sbjct: 315 QHLVPGSKVNVQVDAYSDH---PIVGTVESISPASGSVFSLLPPENATGNFTKVIQRVPV 371

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAK 418
           +I     + ++  LR G    V    +
Sbjct: 372 RIALPQDALDSGRLRAGLSVVVDVDTR 398



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E ++  I    +G + K  V    ++  G  L T ++ +  + +DL +  I   +  +  
Sbjct: 99  EGDIATISPKVTGYVAKVNVVANQEVKAGDVLATLDNGDYQNALDLAQAQIVTEQLSLQR 158

Query: 113 -----EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                E +    +  +   +      R  ++           S      + +   +L   
Sbjct: 159 IDAQIEGANASLVQAQAQKVALEAAVRGAEITQKRQSDLQAKSVGTAADLDNANIALDQA 218

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +     N    +   ++L+A     +  +  ++
Sbjct: 219 KANLAGGDANITAAQANITILQAQRKEAEGSVRSLE 254


>gi|332884992|gb|EGK05245.1| hypothetical protein HMPREF9456_02915 [Dysgonomonas mossii DSM
           22836]
          Length = 359

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 114/358 (31%), Gaps = 83/358 (23%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I K        + +G  LL  +D              +  +  +   +++L       
Sbjct: 70  GYIHKIYFIEHQFVKKGDTLLVIDD--------------REYQIRLKEAEASLQDAMAGS 115

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            V++ +  + +  ++ F                 S     + +L ++ + Y    +L ++
Sbjct: 116 QVIDASVNTSKSNIIVF----------------DSNIEETEARLRKLETDYTRYRNLLSR 159

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           ++     +   + DL              N L QQ+R    S+ E+R+     +  +   
Sbjct: 160 NATTPIQVEQIKTDLDATT-------ARLNALKQQKRTAESSSDEVRKRRGNSEASILRA 212

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +                                  L + +       I +P  G  +  +
Sbjct: 213 SAA--------------------------------LDMAKLNLSYTVITAPCDGF-LGRR 239

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +          Q +  I+P+++   + A     QI+++  G   T+    +     K+FK
Sbjct: 240 ALEEGQLVNAGQNMTYIIPNTQKWIV-ANFKETQIKNLYIGQDVTITIDAFDK---KEFK 295

Query: 365 AIIEKIDPII----SQQDNNLQTQEYYEVILKIT-----DLAFSDNNIELRNGFPAEV 413
             + +I        S    +  T  + ++  +I      D   S++N++L  G  A V
Sbjct: 296 GKVTEISNATGAKYSLVPADNSTGNFVKIQQRIPIRIEFDNLSSEDNMKLAAGMMAVV 353


>gi|298386104|ref|ZP_06995661.1| multidrug resistance protein [Bacteroides sp. 1_1_14]
 gi|298261332|gb|EFI04199.1| multidrug resistance protein [Bacteroides sp. 1_1_14]
          Length = 363

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 63/417 (15%), Positives = 129/417 (30%), Gaps = 96/417 (23%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSG--EILNEDNVVEIKSPF------SGI 66
             L+R  ++  +  + +I W +   IEI     G  +    ++    +         SG 
Sbjct: 21  RKLRRWQIIVSLFGVAVIVWGV---IEIVFLFLGYKQTETSNDAQIEQYVSPVNLRASGY 77

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I K       Q+ +G  LL  +D          K+ +      +   ++    +N     
Sbjct: 78  INKIYFTEHQQVRKGDTLLVLDD-------REYKIRVMEAEAALKDAQAGATVINATLQT 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +      +  + +                                              
Sbjct: 131 TQTTASVYDASIAE---------------------------------------------- 144

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +   L+  +KD    +NL ++NA +   L Q       +  +L     +++  L  +N 
Sbjct: 145 -IEIRLAKLEKDRQRYENLVKRNAATPIQLEQITTEYEATFKKLEATRRQREAALSGVN- 202

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                         E+S   E  +       + L +         +L+P  G  +  +S 
Sbjct: 203 --------------EVSHRRENTEAAIQRATAALEMARLNLSYTVVLAPCDGK-LGRRSL 247

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
               +    Q +  I+P ++   I A     QI++++ G    +       I +K+F   
Sbjct: 248 EEGQFITAGQCITYILPDTQKWII-ANYKETQIENLRIGQKVAITVDA---ISKKEFTGK 303

Query: 367 IEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +  I           P  +   N ++ Q+   V +  TDL+  DN+ +L  G    V
Sbjct: 304 VTAISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTDLSKEDND-KLAAGMMVVV 359


>gi|170728841|ref|YP_001762867.1| secretion protein HlyD family protein [Shewanella woodyi ATCC
           51908]
 gi|169814188|gb|ACA88772.1| secretion protein HlyD family protein [Shewanella woodyi ATCC
           51908]
          Length = 351

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/344 (15%), Positives = 103/344 (29%), Gaps = 30/344 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            +   +       ++    HI  +      + +  D           QL D   +     
Sbjct: 26  TQVRFIESTDNAYVEADISHISVKVPGYVVMTDITDNQHVEVGQLLAQLEDNQYEAKVAQ 85

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S+     + +  ++L  K+T   ++               +     ++ L     L  KN
Sbjct: 86  SQAALESVKAEQQTLAAKVTLQDALINQ---AAAGVKAAESDHLRAEQQLNRTVQLKVKN 142

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             SQ+D++Q +     +   L E         R +                     L+Q 
Sbjct: 143 YSSQDDVDQMQASFESAIAHLDEAKAALIAKQRELAV---------------FKAQLQQV 187

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                   + L + E       + +P +G I   +      Y Q  Q L  +VP     +
Sbjct: 188 DANVVQARAGLKLAEIQLSDTQVRAPFSGII-GKRGAMKGQYVQPGQALYSLVP-DGAVW 245

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQE 385
           I A     QIQH++ G    V    + D   K F  +I+ + P    +         T  
Sbjct: 246 ITANFKETQIQHMQAGQQVKVTLDAFPD---KAFTGVIDSLSPASGAKFSLLPAENATGN 302

Query: 386 YYEV--ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
           + ++   + +     ++  + +  G  A V       +     I
Sbjct: 303 FTKIVQRIPVRIRLAANQEMRIVPGLSAVVEVDTHEAS-INYAI 345


>gi|237717315|ref|ZP_04547796.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262406081|ref|ZP_06082631.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294648148|ref|ZP_06725691.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CC 2a]
 gi|294809706|ref|ZP_06768394.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides xylanisolvens SD CC 1b]
 gi|229443298|gb|EEO49089.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262356956|gb|EEZ06046.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292636532|gb|EFF55007.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CC 2a]
 gi|294443081|gb|EFG11860.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 363

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 115/360 (31%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I K       ++ +G  LL  +D          K+ +      +   ++    +N  
Sbjct: 75  SGYIDKIYFTEHQEVHKGDTLLVLDD-------REYKIRVMEAEAALKDAQAGATVINAT 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +  +      +  + +                                           
Sbjct: 128 LNTTQTTASVYDASIAE------------------------------------------- 144

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               +   L+  +KD    +NL ++NA +   L Q       +  +L     ++K  L  
Sbjct: 145 ----IEVRLAKLEKDRKRYENLVKRNAATPIQLEQIVTDYEATRKKLEATKRQKKAALSG 200

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++E+            + ++ +    + T A EM++L           +++P  G  +  
Sbjct: 201 VDEV----------SYRRMNTEAAIQRATAALEMARLN-----LSYTVVIAPCDGK-LGR 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +S     +    Q +  I+P ++   + A     QI+++  G    V     +D   K+F
Sbjct: 245 RSLEEGQFISAGQTITYILPDTQKWIV-ANYKETQIENLHIGQEVFVTVDAISD---KEF 300

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           K  +  I           P  +   N ++ Q+   V +  TDL+  DN   L  G    V
Sbjct: 301 KGKVTSISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTDLSKEDNE-RLAAGMMVVV 359


>gi|27380413|ref|NP_771942.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110]
 gi|27353577|dbj|BAC50567.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110]
          Length = 476

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 58/383 (15%), Positives = 120/383 (31%), Gaps = 72/383 (18%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V+ +G +      +E+ S  SG + +  V+    + +  PL   +       +D  
Sbjct: 76  IEQTVTVTGALQPV-KTIEVGSQLSGQLARVYVDFNDTVAKDQPLALIDPRSFAAKVDEA 134

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S+      +D  ++ LD                                         
Sbjct: 135 RASLAVANSLVDIARAKLDRARID------------------------------------ 158

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                      +++   +R  L  K    +A+ +S Q+ L     L  +N V+   ++  
Sbjct: 159 -----------LQNARGSRDVLAAKLESAQAVKASAQRTLQRKLALQSQNVVATTTVDDA 207

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +        + RE           ++    +        ++ I  +L+Q +    ++ + 
Sbjct: 208 QTEFTARLAQEREAEVLMSLNSYSVDGAQAD--------VRRIEAELQQARMAVPEKAAV 259

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTP 336
           L   +   ++  I SPI G +V  +  +           +    +    +   I A+V  
Sbjct: 260 LAAAQADLDRTVIRSPIDGVVVG-RFVNEGQTLAVGLESRTTFVVAHRLEDMEIHAQVDE 318

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             I  +  G  A      Y D R        E +   + +   N Q    Y V+L  ++L
Sbjct: 319 ADIGRIASGQRAHFTVDAYPDRRF-------EAVVRQVRKAPQNQQHVVTYTVVLSTSNL 371

Query: 397 AFSDNNIELRNGFPAEVLFTAKN 419
                +  L  G  A V    + 
Sbjct: 372 -----DGALLPGMTALVKIVIER 389


>gi|257060755|ref|YP_003138643.1| efflux transporter RND family, MFP subunit [Cyanothece sp. PCC
           8802]
 gi|256590921|gb|ACV01808.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           8802]
          Length = 463

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/339 (10%), Positives = 101/339 (29%), Gaps = 50/339 (14%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +   + V    S  +G I +  V+ G  + +G  L+  +  +  + +     +++  +
Sbjct: 59  GTLEARERVNLAPSRTNGRIVRIFVKEGDVVSRGQKLVEIQPYQEKEDVRAAIGNLQVAQ 118

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +                                        +V               
Sbjct: 119 ADL----------------------------------------RVAEAEYRQREAERDQA 138

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND----LNQQERIV 223
             ++     N    E      +A  +  +++    K L+E  AVS+ D    L+Q  R +
Sbjct: 139 QAQVEQARANVARAEADVQDAQAEFTLAEQNYPRSKFLYETGAVSKGDETRGLDQAIRNL 198

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                +L+  +  +      +    D         +++   +++  +        +L   
Sbjct: 199 DTRQAQLKSRLQIRDAEKAALQAAIDNFRAS-QKRVEQSFANIDSAKSAIVRAQGQLGST 257

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            +T +   + +PI G +         +     + +  +   +++  +   +  +    ++
Sbjct: 258 SETLDYNFLTAPINGVVGSFIDKKVGDNVNVGEGITTLT-DNQVFNLNVGIPTENRNRLR 316

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           +G    +             +  I  I P++ Q    +Q
Sbjct: 317 QGLPVEI----INPDGTPGVRGQITYIAPLVEQNAQAIQ 351


>gi|113474707|ref|YP_720768.1| chromosome segregation ATPase-like protein [Trichodesmium
           erythraeum IMS101]
 gi|110165755|gb|ABG50295.1| Chromosome segregation ATPase-like protein [Trichodesmium
           erythraeum IMS101]
          Length = 666

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 54/298 (18%), Positives = 109/298 (36%), Gaps = 30/298 (10%)

Query: 22  LLSIIGIIGL----ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            LS     GL    I WSI   I I+V+  G ++    VV  +S   G +   ++ +G  
Sbjct: 44  WLSFSIFGGLVLVGILWSIFGKIPITVTGKGVLIRPRQVVTFQSAIEGNLDSLKIRDGEC 103

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-IDTEKSALDFLNNKYDVLEKAFESREE 136
           + +   L T    +    ++L++  +   +   +DT++        + D L    E   +
Sbjct: 104 VKKDEVLATINPSQLKKQLELQRQKLFLFQTQALDTQRLEGQRTQLEVDGLTTKAEGLRQ 163

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +L D      +  S      +    ++L+ +L  M+++       E K   +     S +
Sbjct: 164 RLRDTQSLTPTLQSNTLEA-LREKGQTLEQRLQDMQAVTPRLK--EEKLQEINKQRVSLE 220

Query: 197 KDLTMMKNLFEK------NAVSQNDLNQQERIVY----------KSTLELRENIHEQKNM 240
           K L   K L  +       A+++  +  QER+            K+ L L++     K  
Sbjct: 221 KRLGDAKKLTPELRDKKLQAIAEQKITLQERLQSAKSLTPILRDKNELALQQQRESLKQR 280

Query: 241 LRHINELYDEANLEFANYLKEI------SRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           L+   EL            K +        +L Q ++ F   +  +  ++   +Q  +
Sbjct: 281 LKDAQELVPVFEQRLTKRQKLLDDGAISQDNLLQTEQEFRQNLQSIAQIKTELKQVEV 338



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 88/293 (30%), Gaps = 11/293 (3%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            +   L+D   +S  NL       +  L  +      L K  E +E +  +   +  ST 
Sbjct: 296 TKRQKLLDDGAISQDNLLQTEQEFRQNLQSIAQIKTEL-KQVEVQEAETAEKYLQNFSTI 354

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +++    +  +         R         ++E +   L +  +   K      N   + 
Sbjct: 355 NEI-EDKLKDLEVEEVETNQRYLDNVNTIREIEGQLQGLDSQTTETSKQFLDNLNQINEI 413

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V   ++  QE    +  LE +  + + K  L  +         E           +E+ 
Sbjct: 414 KVQLQEVKLQETEAMEKFLESQNIMAQLKVDLLDLETQKKRLEQENLEAANTRKNQIEEV 473

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL-- 327
            R  A         ++  +   ILSP+ G I+  +  +   Y      L KI    +L  
Sbjct: 474 NREIAQLE------KQVADNSKILSPVDGCILEIKG-TVGQYVSPGTVLGKINVQGRLSG 526

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
               +    K  + +K     T+        R       I  I      ++  
Sbjct: 527 LMAVSYFPVKDGKMIKSDMKITITPDTVKRERFGGIIGNITSISSFPVTKEGA 579


>gi|225872203|ref|YP_002753658.1| efflux transporter, RND family, MFP subunit [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791266|gb|ACO31356.1| efflux transporter, RND family, MFP subunit [Acidobacterium
           capsulatum ATCC 51196]
          Length = 405

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 79/244 (32%), Gaps = 41/244 (16%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E++ +     L  +++     K ++ +  VSQ   N  ER    +  +      +    L
Sbjct: 132 EDRVNAAAPDLPMYRETFQRNKKMYAEGLVSQQAFNDAERDYLAAANKQNTAKAQIHVDL 191

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI- 300
                                   L+Q      +  + L  L +     T++SPI G + 
Sbjct: 192 AK----------------------LQQALAQVQEAKASLDQLNQQLGYTTLVSPIDGVVL 229

Query: 301 -----VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
                V +   S       +  +M I       Y+  KV    I +V  G  AT+    +
Sbjct: 230 SRDVQVGDAVSSILVLGSTATKVMTIG-DINQVYVDGKVDEADIGNVYLGQPATIHVQSF 288

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +   K F+  + KI P+   +DN       +EV + I      +   EL+    A    
Sbjct: 289 PN---KTFQGKVTKISPMGVDKDNVTT----FEVRVSI-----ENPGHELKALMTANAEI 336

Query: 416 TAKN 419
               
Sbjct: 337 RVSE 340



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 58/154 (37%), Gaps = 1/154 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V ++G I     V +I+S  SGI++K  V+    + +G  L   +  E    +  ++ ++
Sbjct: 58  VVATGPIEPITKV-DIQSKASGIVEKLYVDINQHVTKGEKLAQLDQQEILAQVQAQQATL 116

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              + ++++ K+ +          +        Q    +        + FN        +
Sbjct: 117 AAAQANVESAKANVAEDRVNAAAPDLPMYRETFQRNKKMYAEGLVSQQAFNDAERDYLAA 176

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
              + T    I+++   L+   + ++   +S  +
Sbjct: 177 ANKQNTAKAQIHVDLAKLQQALAQVQEAKASLDQ 210


>gi|188586557|ref|YP_001918102.1| efflux transporter, RND family, MFP subunit [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179351244|gb|ACB85514.1| efflux transporter, RND family, MFP subunit [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 450

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 61/380 (16%), Positives = 125/380 (32%), Gaps = 91/380 (23%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V+ SG +   D+ + I    SG I+    E G ++ Q   L+  +  +        
Sbjct: 68  IEKTVTVSGNVEAADDRLVI-PQASGEIETIHYEEGDKVSQDDILMEIDSED-------- 118

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
                     +  +++       + ++ E    +++ +L                     
Sbjct: 119 --------ARLQRQEAEAALDAARANLEEAEAGAQDAEL--------------------- 149

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                              ++ EN  S     L   +K+L  ++ + ++   +   L Q 
Sbjct: 150 -------------------VEAENAVSNAEDNLRQAEKELERIEEMHQEEFATDQQLEQA 190

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E     +  +L      +  +     +   +A LE      E   +L             
Sbjct: 191 EMQYNNAKSQLESAEAAKDAVEDGARQEQLDA-LEAQVRQAETGVEL------------- 236

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
               ++  E   + +P +GTIV ++ FS    A   +P   I+       + A      +
Sbjct: 237 ---AKRAEENSQVKAPASGTIVSSE-FSEGEMAGAGEPAFMIM-DQDTFQVTATAPASYV 291

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +  G +  +R P   +     F+  I++I  I +++  N      Y V + IT+    
Sbjct: 292 HQISVGDSTEIRIPALNEN----FQGEIQRIGEIPAEKGRN------YPVEIAITEE--- 338

Query: 400 DNNIELRNGFPAEVLFTAKN 419
             N +LR G  AE     + 
Sbjct: 339 --NNDLRTGMFAENYLVIER 356


>gi|283478827|emb|CAY74743.1| putative RND efflux system, membrane fusion protein [Erwinia
           pyrifoliae DSM 12163]
          Length = 398

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 86/289 (29%), Gaps = 15/289 (5%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           ++LDF   +        +  I    + +     ++        + + +     A++  ++
Sbjct: 112 EVLDFQPVHRGDLLMTIDDRI--YRQRVHQSAAQLNMKKAALANNQQQRRSAEAVIKRNE 169

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             L   K    K  +    +         S  E   +      ML  + +      +   
Sbjct: 170 AALHNAKAQALKGGLDLKRVENLAADGSLSVRERDASRASNSQMLAGVQQAQATLEVSRQ 229

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           +    I  +    +   A+  + L + +   +   I +P  G +          Y     
Sbjct: 230 DLQTTIV-NRASLEADVANAQAALELAQIDLDNTRISAPRDGQLGQIAVR-QGAYVTAGS 287

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  +VP     ++ A +   Q+  ++ G   +           + F   +E I P    
Sbjct: 288 RLTSLVPQ--QMWVIANMKETQMARIRPGLPVSFTVDALD---GEGFNGEVEYISPAAGS 342

Query: 377 Q----DNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +      +  T  + ++   + +      DN   LR G   EV     +
Sbjct: 343 EFSAISPDNATGNFVKIAQRIPVRIKITGDNAARLRPGMSVEVTINTAD 391



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 19/171 (11%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIK 104
               V  I    SG I   +V +   + +G  L+T +D        ++   +++KK ++ 
Sbjct: 93  VRGQVTFISPQVSGYITAVEVLDFQPVHRGDLLMTIDDRIYRQRVHQSAAQLNMKKAALA 152

Query: 105 N-----LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN----- 154
           N            +++     N K   L+   + +  + L   G                
Sbjct: 153 NNQQQRRSAEAVIKRNEAALHNAKAQALKGGLDLKRVENLAADGSLSVRERDASRASNSQ 212

Query: 155 --YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              G+     +L++    +++  +NR  LE   +  +A L   Q DL   +
Sbjct: 213 MLAGVQQAQATLEVSRQDLQTTIVNRASLEADVANAQAALELAQIDLDNTR 263


>gi|148258804|ref|YP_001243389.1| efflux pump protein [Bradyrhizobium sp. BTAi1]
 gi|146410977|gb|ABQ39483.1| putative efflux pump protein (HlyD domain), EmrA-FarA family
           [Bradyrhizobium sp. BTAi1]
          Length = 385

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 94/299 (31%), Gaps = 28/299 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +E Q +    +        +   +     +L+   T   ++  N         L +  + 
Sbjct: 93  KEGQQVQKGDELFEIDPVPYRLAVDQAKAALEQARTSYENLTANVKIYGQMLDLAQQGID 152

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             QKD+   + L + N  SQ DL+     +  ++ + +    +  N    +    D    
Sbjct: 153 LKQKDVERKQTLAKNNFGSQLDLDNAANALVTASAQAQFIKQQLSNARTQLLGNPDLPLE 212

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +F  Y++                 +KL   ++  +  T+ +P+ G            +  
Sbjct: 213 QFPPYVQ---------------AKAKLEDAQRDLDHTTLRAPMPGVATQVDQIQLGRFVT 257

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              P+  ++  S   ++ A        +V  G    +    + + R   FK  I  + P 
Sbjct: 258 AGTPVFSVIDVSNP-WVDANPKESDFTYVAVGQPVELDVDAFPNHR---FKGTIGSLSPG 313

Query: 374 ISQQ----DNNLQTQEYYEVILKITDLAFSDNN----IELRNGFPAEVLFTAK-NTTLA 423
              Q         +  + +V+ ++    + D        L+ G    V        TLA
Sbjct: 314 TGAQFAILPPQNASGNFVKVVQRVPVRIYFDKTDKFVTRLKAGMSVNVSIDTGHQRTLA 372



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 65/188 (34%), Gaps = 15/188 (7%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIK 104
                V I    SG I K  V+ G Q+ +G  L   + +       +    ++  + S +
Sbjct: 72  VGAQKVLITPDISGKIVKVVVKEGQQVQKGDELFEIDPVPYRLAVDQAKAALEQARTSYE 131

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS- 163
           NL  ++      LD      D+ +K  E ++    +  G      +       +S     
Sbjct: 132 NLTANVKIYGQMLDLAQQGIDLKQKDVERKQTLAKNNFGSQLDLDNAANALVTASAQAQF 191

Query: 164 LKMKLTRMRSIYLNRLDLENKS----SLLRALLSSHQKDLTMMKNLFE--KNAVSQNDLN 217
           +K +L+  R+  L   DL  +        +A L   Q+DL     L        +Q D  
Sbjct: 192 IKQQLSNARTQLLGNPDLPLEQFPPYVQAKAKLEDAQRDLDHT-TLRAPMPGVATQVDQI 250

Query: 218 QQERIVYK 225
           Q  R V  
Sbjct: 251 QLGRFVTA 258


>gi|268608321|ref|ZP_06142048.1| hypothetical protein RflaF_02323 [Ruminococcus flavefaciens FD-1]
          Length = 548

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/444 (10%), Positives = 144/444 (32%), Gaps = 80/444 (18%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++  ++ +G + + ++   +    +  I+   V+ G ++ +G  +   +D +  + +   
Sbjct: 49  LKQCITVTGTVKSCESSALVSELINSEIRSVDVKAGDRVKKGDVIAVLDDSDLQEQLKRA 108

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++ + +   D   +A   + +     +     R  + +++  + ++   K  +    S
Sbjct: 109 EKTLASAKERNDISINAAKRMYDTAVSDKNTNSQRGSRTVEYARESYNKAVKNRDDVYDS 168

Query: 160 VYRSLKMKLTR---------------------MRSIYLNRLDLENKSSLLRALLSSHQ-- 196
            Y ++  +                          ++   R  + N  +   A++ + +  
Sbjct: 169 YYDAVNARDDAEYEAEQAAQTAAEAAESAAALQVALEEARSAVNNARAQYEAVMENRESS 228

Query: 197 -KDLTMMKNLFEKNAVSQNDLNQQ----------------------------ERIVYKST 227
            ++    K+ F++ + +   L +Q                            E+ +  S 
Sbjct: 229 DEERNAAKSAFDEASSAAAQLEEQLKAANSGVQAASEEAKKAAETYAAAMMAEKELKSSL 288

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ----RTFADEMSKLTIL 283
             +   + E ++ +   ++   E    F + +   + +L+  +     + AD   ++  +
Sbjct: 289 AAVDNCVDEARHGIESASDSKAETEHTFDSTIASSADNLKTTEISVDDSVADIEEQIRTI 348

Query: 284 EKTREQKTILSPIAGTIVYNQSFS----SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           +K   + TI + IAG I      +            Q             I A      I
Sbjct: 349 KKNIAKCTIKADIAGIITEVNVKAGETYGGGAIAVIQ-------DDSSYKIEAAAEQYDI 401

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI----ISQQDNNLQTQEYYEVILKITD 395
             ++KG    +       +        +  + P         D +  + +Y        +
Sbjct: 402 SKLEKGMPTEITVQA---VSSAPMNGTLSFVSPTPQAPTFSADGSGSSTDY------TIE 452

Query: 396 LAFSDNNIELRNGFPAEVLFTAKN 419
            +F++   +LR G  A++      
Sbjct: 453 ASFNNKEDQLRLGMTAKLNIIVGE 476


>gi|170748026|ref|YP_001754286.1| secretion protein HlyD family protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654548|gb|ACB23603.1| secretion protein HlyD family protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 414

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/375 (12%), Positives = 111/375 (29%), Gaps = 81/375 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + + V +    +G +    V +   +  G  +   +D         +   ++  +   + 
Sbjct: 88  QSDKVTVAPRIAGTVAAVLVGDNQPVKAGEVIARLDD---------RSYRVQLKQAEAEV 138

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           EK     L     +++                                         +  
Sbjct: 139 EKDRAQILGVASAIVQ-----------------------------------------QRA 157

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +  +R DL N      A L+  Q++ T  +NL +  + +            ++  +LR+
Sbjct: 158 QVASSRADLAN----AEAALTFAQQEYTRYQNLLQTGSGTVQR-------QQQADADLRQ 206

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +      ++    + +   A             + +     +K+  +       TI
Sbjct: 207 RHAARDKAAASLDAAQKQIDSLKALEAS--------TRASLEGAQAKVEGVRLDLSYTTI 258

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++PI G +  +++            L+ +VP  +  Y+ A     Q   + +G   T   
Sbjct: 259 VAPIDG-VAGDRALRIGQVVSAGTGLLTLVPMGRDIYLVANFKETQTGRMVEGQHVTFTV 317

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNN----IE 404
             + D    +F+  +E   P    Q         T  + +V+ ++      D +      
Sbjct: 318 DAFGDH---EFQGRVESFSPGTGSQFALLPPENATGNFTKVVQRVPVRVALDPSDPLIAR 374

Query: 405 LRNGFPAEVLFTAKN 419
           LR G   E      +
Sbjct: 375 LRPGLSVEATVHTAD 389


>gi|67459436|ref|YP_247060.1| multidrug resistance protein A [Rickettsia felis URRWXCal2]
 gi|67004969|gb|AAY61895.1| Multidrug resistance protein A [Rickettsia felis URRWXCal2]
          Length = 355

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 91/260 (35%), Gaps = 5/260 (1%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L      + +   N   +E K S+ +  L    + L + K  F+  +     + +  +  
Sbjct: 99  LAALEASIEACIKNIEIIEQKISIGQISLEQASEKLKLTKISFDIVSTDFTRVQELNKAK 158

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           + S+  L ++ +  +       +   + ++   N L+ +  +    Q    +      + 
Sbjct: 159 FASSKTLDDSKNAYQKAKTDYKQAQLDLDISKQN-LQLLELEKAAEQEKLKELTENKKVT 217

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            ++ +   +++ + G I  N S    NY    + L  IV      YI+A     QI+  K
Sbjct: 218 LRSLQNTKLIAMVPG-IFGNSSLEVGNYIVPGRALFSIV-QDNTMYIQANFKETQIKKFK 275

Query: 344 KGYTATVRFPHYAD-IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD-LAFSDN 401
            G    + F      I   K + I        S    +  T  + +++ ++   + F   
Sbjct: 276 SGMKVKIEFDALPKKIIYGKIRNIAPATGSKFSLIPPDNATGNFTKIVQRVPVLIDFESP 335

Query: 402 NIELRNGFPAEVLFTAKNTT 421
           N  L  G  A V      +T
Sbjct: 336 NANLVPGMSAIVSIRTDQST 355


>gi|303237039|ref|ZP_07323609.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella disiens FB035-09AN]
 gi|302482426|gb|EFL45451.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella disiens FB035-09AN]
          Length = 344

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 109/285 (38%), Gaps = 18/285 (6%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           L       +T  K  N     +  + +       +     LDL N+ + L+  +++ +++
Sbjct: 71  LQLKRNQLATSKKKLNASRQQIATTQRQMAANRAANDSRTLDLGNQIASLQQQIANLKRE 130

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               + L    A ++  ++  E  +    L L++ +   +  L   NE   + +      
Sbjct: 131 KQRFQELLNDGAATRKQVDDIEYNI----LVLQKQLVATQEQLASANESLSQQSKGINAQ 186

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           ++ +       +    +   + + ++       I+SPI G ++  +    S +A   +PL
Sbjct: 187 IEGLDAQRAMVKADDENLTIETSQIDDQISNTNIVSPINGIVLE-KYMEQSEFAVAGKPL 245

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ- 377
            K+   +    +RA +T +Q+ +VK G    V F  Y + + K++K  I  I        
Sbjct: 246 FKMA-DTNQMIMRAYITSEQLMNVKVGQIVKV-FADYGNEQRKEYKGKITWISNKSEFTP 303

Query: 378 ----DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                ++ +    Y + +++       N+  ++ G   EV    +
Sbjct: 304 KTILTDDERADLVYAIKIRV------KNDGYIKIGMYGEVELLGE 342


>gi|260173269|ref|ZP_05759681.1| putative multidrug resistance protein [Bacteroides sp. D2]
 gi|315921543|ref|ZP_07917783.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|295085488|emb|CBK67011.1| Multidrug resistance efflux pump [Bacteroides xylanisolvens XB1A]
 gi|313695418|gb|EFS32253.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 363

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 115/360 (31%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I K       ++ +G  LL  +D          K+ +      +   ++    +N  
Sbjct: 75  SGYIDKIYFTEHQEVHKGDTLLVLDD-------REYKIRVMEAEAALKDAQAGATVINAT 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +  +      +  + +                                           
Sbjct: 128 LNTTQTTASVYDASIAE------------------------------------------- 144

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               +   L+  +KD    +NL ++NA +   L Q       +  +L     ++K  L  
Sbjct: 145 ----IEVRLAKLEKDRKRYENLVKRNAATPIQLEQIVTDYEATRKKLEATKRQKKAALSG 200

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++E+            + ++ +    + T A EM++L           +++P  G  +  
Sbjct: 201 VDEV----------SYRRMNTEAAIQRATAALEMARLN-----LSYTVVIAPCDGK-LGR 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +S     +    Q +  I+P ++   + A     QI+++  G    V     +D   K+F
Sbjct: 245 RSLEEGQFISAGQTITYILPDTQKWIV-ANYKETQIENLHIGQEVFVTVDAISD---KEF 300

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           K  +  I           P  +   N ++ Q+   V +  TDL+  DN   L  G    V
Sbjct: 301 KGKVTSISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTDLSKEDNE-RLAAGMMVVV 359


>gi|156934686|ref|YP_001438602.1| hypothetical protein ESA_02521 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532940|gb|ABU77766.1| hypothetical protein ESA_02521 [Cronobacter sakazakii ATCC BAA-894]
          Length = 385

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/365 (12%), Positives = 115/365 (31%), Gaps = 74/365 (20%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLP-IEISVSSSGEILNEDNVVEIKSPFSG 65
           +N KR     L  + ++ +I +IG I W  +   +E +  +      E + V +    +G
Sbjct: 37  ENRKRPGKKPLIILGIVVVIMVIGAIIWWFMTRNLETTDDA----FIEGDAVTVAPKVAG 92

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + + +V++  ++ +G  L+  +  + T                     +  D    +  
Sbjct: 93  YVTELRVKDNQRVKKGDLLVVIDPRDAT---------------------AQRDQAQAQLS 131

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + E      + QL     +Y +   +     + +       +L   R+ Y  +  ++ ++
Sbjct: 132 LAESQLHQAQAQLALAKVQYPAQRDQAKAQVLRAQ-----AELANARAEYQRQRGVDPRA 186

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  +                                 +  +  +LR       N    + 
Sbjct: 187 TSKQN--------------------------------IDAANAQLRSAEAGLANAQAQL- 213

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               E   +    +++   ++E  Q       ++L   E       + +P  G +     
Sbjct: 214 ----EVAEQVQLQIRQQETNVEARQSQVEQARAQLKTAELNLSYTEVRAPFDGYVTKRNV 269

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +     Q    L  IV      ++ A     Q++ ++ G    +    + D+   + + 
Sbjct: 270 QN-GTLVQAGSALFSIVSPD--IWVVANFKESQLERMRPGNKVEISVDAFPDL---ELEG 323

Query: 366 IIEKI 370
            +E I
Sbjct: 324 HVESI 328


>gi|51473441|ref|YP_067198.1| multidrug resistance protein A [Rickettsia typhi str. Wilmington]
 gi|51459753|gb|AAU03716.1| multidrug resistance protein A [Rickettsia typhi str. Wilmington]
          Length = 350

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 55/418 (13%), Positives = 133/418 (31%), Gaps = 84/418 (20%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           K  + + +K + ++ +I           W+     + +         + ++  + +  SG
Sbjct: 11  KYKYHSFIKYVIIIVLIVFTYFGYRIYVWANTQSTDNAYI-------DADISNVSTEVSG 63

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++ K  V N +++ +G  +   +D              ++ +  +               
Sbjct: 64  VLTKLFVTNNTRVNKGDLIGEIDD--------------RDYKARLAA------------- 96

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                                       +  I +  +++++   ++    +    +  K 
Sbjct: 97  ---------------------------LDASIQACIKNIEIIEKKISIGQMRLEQVTEKL 129

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            L +        DLT ++ L     VS   L+  +    K   E ++           ++
Sbjct: 130 KLTKISFDIISIDLTRVQALSNAKFVSSKTLDDSKNGYQKVKTEYKQ---------AQLD 180

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               + NL+     K         Q    + +    +  ++ +   I++ + G I  N +
Sbjct: 181 LDISKHNLQLLELEK------AAAQEKLKELIENKKVTLRSLQNTKIIAMVPG-IFSNSN 233

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD-IREKKFK 364
            +  NY  + + L  IV      YI+A     QI++ K G    + F      +   K +
Sbjct: 234 LAIGNYIVKGKVLFSIV-QDNTMYIKANFKETQIKNFKSGMKVKIVFDALPAKVIYGKIR 292

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITD-LAFSDNNIELRNGFPAEVLFTAKNTT 421
            I        S    +  T  + +++ ++   + F+  N  L  G  A V      +T
Sbjct: 293 NIAPATGAKFSLIPPDNATGNFTKIVQRVPVLIDFAPTNDTLVPGMSARVSIRTDQST 350


>gi|326789324|ref|YP_004307145.1| hypothetical protein Clole_0193 [Clostridium lentocellum DSM 5427]
 gi|326540088|gb|ADZ81947.1| hypothetical protein Clole_0193 [Clostridium lentocellum DSM 5427]
          Length = 379

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 145/368 (39%), Gaps = 31/368 (8%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G++  + N   I   F   +    V+NG  + +   L T +  +    +  K+  ++  +
Sbjct: 41  GDVTPD-NSQLITLDFPAKVTAVHVKNGDILQKDDILFTLDFSDYLLQMSSKEKELEEAQ 99

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +   + +L+    +YD           + L    KY    S      + S    L+ +
Sbjct: 100 IQLKNLEQSLNPQLAQYDATS--------ENLALKKKYLQQDSDPEIIPLESELELLEKE 151

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
            T  +S+Y    +L     L +  L + ++    +  L +  A S    +  ++I    T
Sbjct: 152 ATTTKSLYETNQELFTNGLLAQQELEASEQAYKAI--LQKIKATS----SAIKQIKDART 205

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           LE+    +E K++   I+      + E +  L+++   +   + T ++  SKL   E   
Sbjct: 206 LEVNTLSNELKSLKSQISN----TDQEKSTSLEKLRVQIALLEETISNMKSKLD--EPYL 259

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            + TI++P+   +VY+ +  + +    +  ++  +      YI A +  + +  VK+G  
Sbjct: 260 RENTIIAPVNDMVVYDIAVMNGSDLSSTNGILGKLLSQDSLYILADIPEESLSLVKEGQP 319

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            ++    + D  +      I +I    + +D +       E  +++T+      +  L+ 
Sbjct: 320 VSISLAGHTDS-QPVLAGTISQIAGCATLKDGDTVV----EAHIQVTE-----GSKHLKA 369

Query: 408 GFPAEVLF 415
           G  A+++ 
Sbjct: 370 GLSADIIV 377


>gi|301061698|ref|ZP_07202439.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [delta proteobacterium NaphS2]
 gi|300444158|gb|EFK08182.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [delta proteobacterium NaphS2]
          Length = 376

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 81/227 (35%), Gaps = 23/227 (10%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + +   +      L    T ++ +    ++    ++  +A L        M+K 
Sbjct: 92  LFQMDPEPWQNRVDEYEAQLASAGTSVQKLGQKVVEARADAAQTQANLKGAVAKYQMIKR 151

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             EKNAVS+  L + E+ V     +++ +    +      +                   
Sbjct: 152 AAEKNAVSRIHLEEIEQRVAALKAQIKADKAAVRTAQLAFDSAVG--------------- 196

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                    A+ ++KL   +   +   I +P  G     Q +    +A+  +P+M  V +
Sbjct: 197 ---DEHTRIAEVLAKLATAKYNVKNTIIRAPSDGYAANMQLY-PGFFARLKKPVMSFV-N 251

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           ++  +I AK+  + IQHV+ G  A V    +     K F A +  + 
Sbjct: 252 TEKYWIVAKMDQRGIQHVRPGDHAEV---AFDMYPGKVFPAKVVSVT 295



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/212 (10%), Positives = 68/212 (32%), Gaps = 17/212 (8%)

Query: 28  IIGLITW--SILLPIEISVSSSGEILNEDNVVEIKSPF-------SGIIKKFQVENGSQI 78
            +    W  + L  I     S G+         ++S          G++K+  +   + +
Sbjct: 31  FVVFGLWVAAALTEI----LSLGQFTPYSKEAFVQSYVVQMAPEYGGLVKEVFITANTPV 86

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G PL   +     + +D  +  + +       +K     +  + D  +     +    
Sbjct: 87  KKGDPLFQMDPEPWQNRVDEYEAQLAS--AGTSVQKLGQKVVEARADAAQTQANLKGAVA 144

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              + K  +  + V    +  + + +     ++++          + +   A+   H + 
Sbjct: 145 KYQMIKRAAEKNAVSRIHLEEIEQRVAALKAQIKADKAAVR--TAQLAFDSAVGDEHTRI 202

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             ++  L       +N + +     Y + ++L
Sbjct: 203 AEVLAKLATAKYNVKNTIIRAPSDGYAANMQL 234


>gi|253569495|ref|ZP_04846905.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251841514|gb|EES69595.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 363

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 63/417 (15%), Positives = 129/417 (30%), Gaps = 96/417 (23%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSG--EILNEDNVVEIKSPF------SGI 66
             L+R  ++  +  + +I W +   IEI     G  +    ++    +         SG 
Sbjct: 21  RKLRRWQIIVSLFGVAVIVWGV---IEIVFLFLGYKQTETSNDAQIEQYVSPVNLRASGY 77

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I K       Q+ +G  LL  +D          K+ +      +   ++    +N     
Sbjct: 78  INKIYFTEHQQVRKGDTLLVLDD-------REYKIRVMEAEAALKDAQAGATVINATLQT 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +      +  + +                                              
Sbjct: 131 TQTTASVYDASIAE---------------------------------------------- 144

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +   L+  +KD    +NL ++NA +   L Q       +  +L     +++  L  +N 
Sbjct: 145 -IEIRLAKLEKDRQRYENLVKRNAATPIQLEQITTEYEATFKKLEATRRQREAALSGVN- 202

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                         E+S   E  +       + L +         +L+P  G  +  +S 
Sbjct: 203 --------------EVSHRRENTEAAIQRATAALEMARLNLSYTVVLAPCDGK-LGRRSL 247

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
               +    Q +  I+P ++   I A     QI++++ G    +       I +K+F   
Sbjct: 248 EEGQFITAGQCITYILPDTQKWII-ANYKETQIENLRIGQEVAITVDA---ISKKEFTGK 303

Query: 367 IEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +  I           P  +   N ++ Q+   V +  TDL+  DN+ +L  G    V
Sbjct: 304 VTAISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTDLSKEDND-KLAAGMMVVV 359


>gi|256839623|ref|ZP_05545132.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256738553|gb|EEU51878.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 356

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 51/359 (14%), Positives = 106/359 (29%), Gaps = 85/359 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+ + +    + QG  LL  +D E    +              + E + +D     
Sbjct: 67  SGYIKEVRFKEHQYVHQGDTLLILDDREYRIKVK-------------EAEAALIDA---- 109

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                                  S  +  + + + + N    + 
Sbjct: 110 -------------------------------------QGSQDVLRSGIETSHTNIAVQDA 132

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +  +A L   ++D    + L ++ ++ +    Q +     +    +  + ++K     
Sbjct: 133 NIAEAKAKLWQLEQDYHRFERLLKEESIPEQQYEQSKAAFEAAQARYQALVEQKKAAFSQ 192

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E   +     A  L++                + L +         I +P  G +   
Sbjct: 193 FTETSKKTTGAEAAILRK---------------EADLDLARLNLSYTVITAPYDGHV-GR 236

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     Y Q  Q +  +V   K  +I A     QI H+  G    ++         K F
Sbjct: 237 RTLEPGQYVQAGQTISYLV-RDKDKWITANYKETQIPHIYIGQKVRIKVDALP---GKIF 292

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +  I           P  +   N ++ Q+   V + + +L+  D    LR G   E
Sbjct: 293 NGEVTAISDATGSKYSLVPTDNSAGNFVKVQQRIPVRIDLENLSQEDTQY-LRAGMMVE 350


>gi|332799730|ref|YP_004461229.1| RND family efflux transporter MFP subunit [Tepidanaerobacter sp.
           Re1]
 gi|332697465|gb|AEE91922.1| efflux transporter, RND family, MFP subunit [Tepidanaerobacter sp.
           Re1]
          Length = 545

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 73/425 (17%), Positives = 148/425 (34%), Gaps = 52/425 (12%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E+ +  SG +L  +    I     G +KK   E G  + +G  L   ED + +  ++  
Sbjct: 50  LEVVLKGSGTLLPMEQ-ETINLKVDGTVKKVYFEEGDVVKKGDLLFELEDEDLSISLEKS 108

Query: 100 KVSIKNLRCHIDT--EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV----- 152
           ++S+   + ++    E+     +    D + K+ + +    ++      +   +      
Sbjct: 109 QLSLIQQQINLQEINEQKQKAVIYAPEDGVVKSVDVKVGDSVNANSVLATIQDQNKCQVK 168

Query: 153 ---FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
               +  I ++ +  K ++  +  IY    ++  K+  +  L S+      +   +    
Sbjct: 169 VPFISSQIKNIKQGQKAEVMFLDPIYTVEGEV-TKTDTVGTLTSTGSIYYYVTVTMNSNY 227

Query: 210 AVSQNDLNQQERIVYKSTLELRENIH-----EQKNMLRHINELYDEANLEFANY------ 258
            V + D   Q  ++  S  EL          E  ++   I+    E   E          
Sbjct: 228 YVEEKDTAVQVHVITDSGKELGIEQALIEPEEAVDVKSEISSKVKEIYAEEGEVVKKGQK 287

Query: 259 -----LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                L++I+RD+E+ Q T       L       E   + SPI GTI+        +  +
Sbjct: 288 LFSLDLEDINRDIEKQQLTLQQAELDLKSKISQLENLLVYSPIDGTIIEQNVR-EGDLIR 346

Query: 314 Q-------SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                   S P   IV +     +   V    I +V+ G    +      D     F+  
Sbjct: 347 PSTSSSSSSDPAAVIV-NYAKMQVVLPVDELDINNVEIGMPVKITAEAVPDQ---VFEGQ 402

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +EKI    ++Q  +      ++V +    +       EL+ G   +V     +      +
Sbjct: 403 VEKI----AEQGQSQNNVSTFDVTITTDKVD------ELKAGMTVDVEMVVASK--QDVL 450

Query: 427 IHPIT 431
           I PIT
Sbjct: 451 ILPIT 455


>gi|319899287|ref|YP_004159382.1| multidrug resistance efflux pump VceA protein [Bartonella
           clarridgeiae 73]
 gi|319403253|emb|CBI76812.1| multidrug resistance efflux pump VceA protein [Bartonella
           clarridgeiae 73]
          Length = 366

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 114/378 (30%), Gaps = 82/378 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + ++  I    SG I++  +E    + +G  L   E  +    +D         + H+D
Sbjct: 54  VQGDIAAISPKLSGYIEEVSIEANQAVKKGDILFRLESGDYQINLD-------QTKTHLD 106

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T++  L  ++                                                ++
Sbjct: 107 TQQKILMRID-----------------------------------------------AQI 119

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            + +    D + + +   A+ ++ Q  L  +  L     VSQ++++  +    ++   + 
Sbjct: 120 VAAHSALDDAQAQKAAASAVATNTQLTLQRITELKNDRYVSQSNVDNAKSAYEQAIANVT 179

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               +      +I  L                    + +    +         +  +   
Sbjct: 180 RTEAQIAAARANIQVL---------------EAQRHEIESQTKNLELTRDKARRDLDSTI 224

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P  G I    +          Q L  +VP ++  YI A     QIQ+++ G TA + 
Sbjct: 225 LRAPFDGIIGNLTAKKGDFVVN-GQRLAALVPINE-LYIEANYKETQIQNIQSGQTAYIS 282

Query: 352 FPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNI 403
              +   R+  F+  +  + P           Q      T+    + ++I+       + 
Sbjct: 283 VDAF---RKDVFEGTVLSVSPATGAVFSLLPPQNATGNFTKITQRIPIRISIPEHILKSE 339

Query: 404 ELRNGFPAEVLFTAKNTT 421
            ++ G    V    +  T
Sbjct: 340 RIKAGMSVIVTIDTRPKT 357


>gi|307823000|ref|ZP_07653230.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
 gi|307735775|gb|EFO06622.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
          Length = 408

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 82/265 (30%), Gaps = 34/265 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L   +  + +++  R  +  K     A L+    D+T  +      +VS+
Sbjct: 90  QTALGQRRGELGQVVREIGAVFSTRRQICQKLIARSARLARVHHDVTRFRQALPTGSVSE 149

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHI--NELYDEANLEFANYLKEISRDLEQNQR 271
             +   E        E+RE   E K +   +         ++E A Y             
Sbjct: 150 QVMQNAEDQATALEAEMREAEAELKAIEAKVGGTSKILHPDVEAAKY------------- 196

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                  K         ++ I +P++G +   +     +  Q   PLM IVP     ++ 
Sbjct: 197 -------KFIAAYLEYSRQQIHAPVSGYV-SMRRAQVGSRVQPGDPLMTIVPLDH-LWVE 247

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIR--EKKFKAIIEKIDPIISQQDNNLQTQEY--- 386
           A +   +I  ++ G  A V    Y   R      + +I     + +    +     +   
Sbjct: 248 ANLRETEIAQIRPGQPAEVSVDLYGKNRIYHGTVEGLIPGTGSVFALLPPDNAVGNFIHI 307

Query: 387 ---YEVILKITDLAFSDNNIELRNG 408
                V + +       N   +R G
Sbjct: 308 VERIPVRIALRQDEILKN--PIRPG 330



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/140 (12%), Positives = 43/140 (30%), Gaps = 2/140 (1%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
             N++ +++  +GI+ +  VE    + +G  L++ ++      +  ++  +  +   I  
Sbjct: 50  TGNLIPVEADATGIVTQVLVEESQHVNKGDLLVSLDEHRAQTALGQRRGELGQVVREIGA 109

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             S    +  K              +  F     +    V    + +           MR
Sbjct: 110 VFSTRRQICQKLIARSARLARVHHDVTRFRQALPTGS--VSEQVMQNAEDQATALEAEMR 167

Query: 173 SIYLNRLDLENKSSLLRALL 192
                   +E K      +L
Sbjct: 168 EAEAELKAIEAKVGGTSKIL 187


>gi|300722116|ref|YP_003711398.1| hypothetical protein XNC1_1118 [Xenorhabdus nematophila ATCC 19061]
 gi|297628615|emb|CBJ89189.1| conserved hypothetical protein; putative exported protein
           [Xenorhabdus nematophila ATCC 19061]
          Length = 426

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 111/314 (35%), Gaps = 44/314 (14%)

Query: 123 KYDVLEKAFESREEQLLDFLGKY---HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           + + L   FE    Q+L   G+          +    I    R  ++++ +  S+     
Sbjct: 73  RLETLPAPFEGIINQVLVKEGQRVNADQILVTLDTRKIDIELRQAQVEMIKASSVVDQLH 132

Query: 180 DLENKSSLLRALLS---------SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           D EN   ++RA  +           + +    + LF +  V + ++   E+ + +   +L
Sbjct: 133 DWENSQEVIRARRNVENANHMVMELKNNFAKTQALFSRGIVPRMEVETLEQQLRRQLTDL 192

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                E                   +   K    ++   +    +  S+  +L++    K
Sbjct: 193 ASAQDEL-----------------VSTRQKGNVNNVRVAEMELQNATSRYQVLQQQHAHK 235

Query: 291 TILSPIAGTIVYNQSFSSS-------NY-AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            I +P +G ++                    +  PL++I+  +    I A+V    +  +
Sbjct: 236 EIKAPFSGVVLRATQGEKGKFLTIQTGVRVTEGTPLLEIM-DTTQYQILAQVEESDLVKL 294

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K+G    +    +AD         IE I  + S  ++      YY+V++K+  ++  + N
Sbjct: 295 KEGQAVKISGEGFADH---PLDGEIETI-AMQSANNDKSGAAIYYDVVIKV--ISSMNQN 348

Query: 403 IELRNGFPAEVLFT 416
             +R G  A+V   
Sbjct: 349 YPIRPGMSAKVNIV 362


>gi|294146692|ref|YP_003559358.1| multidrug resistance efflux pump [Sphingobium japonicum UT26S]
 gi|292677109|dbj|BAI98626.1| multidrug resistance efflux pump [Sphingobium japonicum UT26S]
          Length = 383

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/373 (10%), Positives = 99/373 (26%), Gaps = 82/373 (21%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           + + +    SG + +  VE    +  G PL+  +               ++ R       
Sbjct: 64  DSITVAPKVSGYVDRVFVEENQDVRAGQPLVQIDP--------------RDYRAQAAQSV 109

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           + +D        +                                        + ++   
Sbjct: 110 AQIDVARANAAGV----------------------------------------VAQIAEQ 129

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                  E   +   A  +    ++   + L    A ++  L++ +    ++        
Sbjct: 130 RAAIAQAEADLNAANANAAFAASEVERYRPLAASGAETRERLSELQNQAIQARARAAAAR 189

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               +  + I  L                  + Q +       ++L+      E   + +
Sbjct: 190 ATLTSAQKRIATL---------------QTQVRQAEAQGEAARAQLSAASTNVEATILRA 234

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
              G I  ++S     + Q +  LM +VP     Y+ A     Q+  ++ G    +    
Sbjct: 235 AADGRI-GDKSVRQGQFVQAASRLMTLVPK-ASLYVEANFKETQLGLMRVGQPVKIEVDA 292

Query: 355 YADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              +   +    +  I P        +  Q      T+    + ++I   A  +    L 
Sbjct: 293 LPGV---ELPGRVASIAPGTGAQFSVLPPQNATGNFTKIVQRIPVRIAVSAGPETRKLLV 349

Query: 407 NGFPAEVLFTAKN 419
            G   EV    ++
Sbjct: 350 PGMSVEVSVDTRS 362


>gi|198276163|ref|ZP_03208694.1| hypothetical protein BACPLE_02352 [Bacteroides plebeius DSM 17135]
 gi|198270975|gb|EDY95245.1| hypothetical protein BACPLE_02352 [Bacteroides plebeius DSM 17135]
          Length = 360

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 54/360 (15%), Positives = 109/360 (30%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IKK        + +G  LL  +D          ++ +      +    +    ++  
Sbjct: 72  SGYIKKIYFTEHQDVRKGDTLLVLDD-------REYRIRVMEAEAALKDALAGATVIDAT 124

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               + +                                                   E 
Sbjct: 125 LQTTQNSASV-----------------------------------------------YEA 137

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + +   L+  +KD    +NL ++NA +   L Q E     +  +L     +Q+  +  
Sbjct: 138 SIAEIEIRLAKLEKDRQRYENLVKRNAATPIQLEQIETEYEATRKKLEATKRQQRAAMSG 197

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +               KE+S   E  +       + L +         +++P  G  +  
Sbjct: 198 V---------------KEVSNRRESTEAAIQRATAALEMARLNLSYTVVVAPCDGK-LGR 241

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     Y    Q +  I+P ++   I A     Q++++K G    +     +D    +F
Sbjct: 242 RTLEEGQYITAGQTVTYILPDTQKWVI-ANYKETQVENLKVGQEVRISVDAISDR---EF 297

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
              I  I           P  +   N ++ Q+   V ++ TDL+  DN+  L  G    V
Sbjct: 298 TGRITAISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIEFTDLSKEDND-RLAAGMMVVV 356


>gi|4928922|gb|AAD33771.1|AF139107_1 hypothetical multidrug resistance protein [Pseudomonas aeruginosa]
          Length = 328

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 82/252 (32%), Gaps = 17/252 (6%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I    S L     +  V +     + + L+           +     +++    L  
Sbjct: 87  QGEITRVASQLGARVEEVLVRDNQHVDKGQLLVRLEDADFKLAVERAQAALATREAELAQ 146

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             +++              +  +A L   Q DL   + L +   VS+  +       + +
Sbjct: 147 ARSKLVQQGSLIAASAADVNASQATLGRAQIDLNRAEALRKPGYVSEERVTTLTADNHVA 206

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             +L +   + +                       +  ++++ +   A   ++L   E  
Sbjct: 207 RSQLAKARADLEAQRVQ---------------RDTLGAEIKRLEAQIASARTELAQAEIN 251

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  I SPI G +   +S  +  Y Q    L+ +VP     +++A     Q+  ++ G 
Sbjct: 252 LSRTLIHSPINGLV-GQRSARNGQYVQVGTHLLSLVPDED-IWVQANFKETQVGRMRDGQ 309

Query: 347 TATVRFPHYADI 358
            A + F  + D 
Sbjct: 310 KARLTFDAFPDT 321



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 91/286 (31%), Gaps = 11/286 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            +    L  +G+I L  +     I   V S+     +  +  + S     +++  V +  
Sbjct: 51  RRLTVFLVAVGLIALAFFLHWWFIGRHVESTDNAYVQGEITRVASQLGARVEEVLVRDNQ 110

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L+  ED +    ++  + ++      +   +S L  +     +   A +    
Sbjct: 111 HVDKGQLLVRLEDADFKLAVERAQAALATREAELAQARSKL--VQQGSLIAASAADVNAS 168

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q      +     ++         Y S +   T     ++ R  L    + L A      
Sbjct: 169 QATLGRAQIDLNRAEALR---KPGYVSEERVTTLTADNHVARSQLAKARADLEAQRVQRD 225

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYDEANLE 254
                +K L  + A ++ +L Q E  + ++ +   +   + ++        ++       
Sbjct: 226 TLGAEIKRLEAQIASARTELAQAEINLSRTLIHSPINGLVGQRSARNGQYVQVGTHLLSL 285

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
             +    +  + ++ Q     +  K  +            PI G I
Sbjct: 286 VPDEDIWVQANFKETQVGRMRDGQKARLTFDAFPDT----PIDGRI 327


>gi|306826224|ref|ZP_07459558.1| competence factor transporter ComB [Streptococcus sp. oral taxon
           071 str. 73H25AP]
 gi|304431500|gb|EFM34482.1| competence factor transporter ComB [Streptococcus sp. oral taxon
           071 str. 73H25AP]
          Length = 449

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 62/440 (14%), Positives = 145/440 (32%), Gaps = 32/440 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R +     R+ L   +  + L+ +++    EIS+S+   +     +  I+S  +  I   
Sbjct: 14  RRYHNFSSRVILPMSLLFVFLLGFAVFAEKEISLSTRATVEPSRIIANIQSTSNQRIVAN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            +E    + QG  L+ ++       ++     ++ L+            L    D   +A
Sbjct: 74  YLEENKLVKQGELLVEYQQGAEAVQVEAYASQLEMLKDQKKQLGYLQSSLKEGSDQFPEA 133

Query: 131 FE-SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR------SIYLNRLDLEN 183
            +   +E   D+L + +   S V     +   ++     T+               D + 
Sbjct: 134 DKFGYQEMFRDYLSQANGLRSNVSQQNETIASQNAAASQTQAEIGNLISQTEAKIRDYQT 193

Query: 184 KSSLLRALLSSHQKDLTMM-----------KNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
             S +    S   ++L                  +  AV+Q +   Q   +  S    R 
Sbjct: 194 AKSAIETGASLTSQNLAYSLYQSYKSQREENPQAKAQAVAQVE--AQLSQLESSLATYRV 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                     + + L  +     + +L ++ ++L    +   +  S   +     ++  I
Sbjct: 252 QYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLDQKILEAESGKKVQGNLLDKGKI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTAT 349
            +   G +  N   S S    +   L ++ P       T + A ++ K +  VK G +  
Sbjct: 312 TASEDGVLHLNPETSESTMVAEGTLLAQLYPSLEKEGKTKLTAYLSSKDVARVKIGDS-- 369

Query: 350 VRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           VR+    D + +    + I  ID   ++ +       ++++ ++      S+    LR G
Sbjct: 370 VRYTTTNDAKNQIFLDSTITSIDATATKTEKG----NFFKIEVET--HLTSEQASTLRYG 423

Query: 409 FPAEVLFTAKNTTLAQEIIH 428
               +       +  +    
Sbjct: 424 LEGRLQMITGKKSYLRYFWD 443


>gi|261343571|ref|ZP_05971216.1| multidrug resistance protein A [Providencia rustigianii DSM 4541]
 gi|282568720|gb|EFB74255.1| multidrug resistance protein A [Providencia rustigianii DSM 4541]
          Length = 393

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 66/419 (15%), Positives = 123/419 (29%), Gaps = 110/419 (26%)

Query: 20  MTLLSIIGIIGLITWSILLPI--------EISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +  L+ I I   I W+    +        + +  +        N V+I++  SG +    
Sbjct: 25  LMFLTFIFIAIGIVWAAYWYLVLRHYESTDNAYVA-------GNQVQIQAQISGSVMTVN 77

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+N   +  G+ L+  +  +                  +  EK+  +  N+     +   
Sbjct: 78  VDNTDFVQSGSVLVELDPRD----------------AELALEKAKTELANSVRQSRQHII 121

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            SR+ Q                                          ++E K S L  L
Sbjct: 122 NSRQYQ-----------------------------------------ANIEVKRSELARL 140

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               Q DL   + L   N + + +L      V  +   L   I +       +     E 
Sbjct: 141 ----QNDLKRREVLGSSNLIGKEELQHARDAVVTAKGALDVAIEQYNANQAIVLGTALEK 196

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                    ++                       T ++  I+SP+ G +   +S    + 
Sbjct: 197 QPLVEQAATQVRNAWL------------------TLQRTKIVSPVDGYVSR-RSVQIGSQ 237

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              S PLM IVP S   ++ A     Q+  ++ G  A V    Y       FK  +  +D
Sbjct: 238 ITPSTPLMAIVPSSG-MWVDANFKETQLADMRIGQPAKVTSDFYGKKI--VFKGTVVGLD 294

Query: 372 ----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                     P  +   N ++  +   V + +      +  + +  G   EV    KN 
Sbjct: 295 MGTGSAFSLLPAQNASGNWIKVVQRLPVRIALDPAQLDEYPLRI--GLSTEVEVDTKNK 351


>gi|255014037|ref|ZP_05286163.1| putative multidrug resistance protein [Bacteroides sp. 2_1_7]
          Length = 356

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 51/359 (14%), Positives = 106/359 (29%), Gaps = 85/359 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+ + +    + QG  LL  +D E    +              + E + +D     
Sbjct: 67  SGYIKEVRFKEHQYVHQGDTLLILDDREYRIKVK-------------EAEAALIDA---- 109

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                                  S  +  + + + + N    + 
Sbjct: 110 -------------------------------------QGSQDVLRSGIETSHTNIAVQDA 132

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +  +A L   ++D    + L ++ ++ +    Q +     +    +  + ++K     
Sbjct: 133 NIAEAKAKLWQLEQDYHRFERLLKEESIPEQQYEQSKAAFEAAQARYQALVEQKKAAFSQ 192

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E   +     A  L++                + L +         I +P  G +   
Sbjct: 193 FTETSKKTIGAEAAILRK---------------EADLDLARLNLSYTVITAPYDGHV-GR 236

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     Y Q  Q +  +V   K  +I A     QI H+  G    ++         K F
Sbjct: 237 RTLEPGQYVQAGQTISYLV-RDKDKWITANYKETQIPHIYIGQKVRIKVDALP---GKIF 292

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +  I           P  +   N ++ Q+   V + + +L+  D    LR G   E
Sbjct: 293 NGEVTAISDATGSKYSLVPTDNSAGNFVKVQQRIPVRIDLENLSQEDTQY-LRAGMMVE 350


>gi|255007565|ref|ZP_05279691.1| HlyD family secretion protein [Bacteroides fragilis 3_1_12]
 gi|313145257|ref|ZP_07807450.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134024|gb|EFR51384.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 344

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 52/381 (13%), Positives = 109/381 (28%), Gaps = 90/381 (23%)

Query: 48  GEILNEDNVVEIKSPF------SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           G +   DN    +          G I+K        + +G  L   ED E        + 
Sbjct: 33  GNVEFTDNAQVRQHIVPVNCRVQGFIRKIYFTEYQTVHKGDTLALIEDAEF-------RF 85

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +  +        S    + +                                       
Sbjct: 86  RLAQVEADYQNALSGKTVMTSS-------------------------------------- 107

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                    + +I  N    +      +  + +  ++    +NL E++AV++   +  + 
Sbjct: 108 ---------IHTIQNNISVSDASIQEAKIRMDNAGREYKRYQNLLERDAVTRQQYDAVKT 158

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               S       + ++K+                A   +E +  LEQ +       + L 
Sbjct: 159 NFEASKARYELLLRQKKST---------------ALVKQEQTERLEQTEAGIKLAEAALE 203

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           I         I +P  GT    +        Q  Q L+ +V  +    + A     QI H
Sbjct: 204 IARLNLSYTVITAPCDGT-TGRKEIQEGVLVQPGQTLVNLVDENDKWVV-ANYKETQITH 261

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVIL 391
           + +GY   +       +    FK +++ +           P  +   N ++ ++   V +
Sbjct: 262 IGEGYPVDIEVDAIPGV---VFKGVVKSVSQATGASFSLLPQDNSAGNFVKVEQRIPVRI 318

Query: 392 KITDLAFSDNNIELRNGFPAE 412
           + +D    ++   LR G   E
Sbjct: 319 EFSDGNKPEDMKRLRAGMNVE 339


>gi|332799661|ref|YP_004461160.1| RND family efflux transporter MFP subunit [Tepidanaerobacter sp.
           Re1]
 gi|332697396|gb|AEE91853.1| efflux transporter, RND family, MFP subunit [Tepidanaerobacter sp.
           Re1]
          Length = 408

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 54/386 (13%), Positives = 111/386 (28%), Gaps = 86/386 (22%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +I   I   +++ G +       E+ S   G+++    E G Q+ +G  +L  +D E   
Sbjct: 40  AIKGDISSKITALGNVE-TRQKQEVYSGIQGMVEYI-AEEGQQVKKGDVVLKIDDGE--- 94

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
                          ++ E++         ++       R E+L     KY    +    
Sbjct: 95  -------------LKLELEQAQSKVKQQNVELSRLLGGPRPEELKKARIKYQEALT---- 137

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                                                  +  +D    + LF + A+S+N
Sbjct: 138 ------------------------------------SYEAALEDYEKNQGLFNEGAISEN 161

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +    +R +     +L                   E  L       E   ++   Q    
Sbjct: 162 EYINIKRELDVKKNQL----------------AIMEVELSLLENPDE--HEIALKQAALE 203

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           +    L  + K  ++  IL+   G ++  +             L+ I        I   V
Sbjct: 204 EAEKSLANITKKLDKTIILAEFDGIVIKQEI-KQGMTVSSGNLLLSIGSPDD-LQIDIGV 261

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
                 ++K G  A +    + D      K  + KI P  S    +   +   +  +K+ 
Sbjct: 262 NEYDASNIKVGQKAIITGDGFGDKIY---KGEVVKIAPSASTIQTSRGNETTVKATIKVN 318

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNT 420
           D      +  ++ GF      T ++ 
Sbjct: 319 DP-----DENIKPGFSTTAEITIEDK 339


>gi|316933174|ref|YP_004108156.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315600888|gb|ADU43423.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 421

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/327 (11%), Positives = 107/327 (32%), Gaps = 36/327 (11%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            ++    + L    + +       ++ E +  D + +      K+      +   + +  
Sbjct: 116 AYVRANNTTLGARVSGHLAAILPRDNSEVKAGDVVFRIDDGDYKIAVASARAKIATQEAT 175

Query: 168 LTRM-RSIYLNRLDLENKSSLLRALLSSHQK---DLTMMKNLFEKNAVSQNDLNQQERIV 223
           + R+ R I   +  +E   + L +  ++ ++   D    + L  K   S+      +   
Sbjct: 176 IARIGRQIAAQQSAVEQAQAQLESAEAAARRAALDFDRQQALSTKGFASRAVFETSQAG- 234

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                         ++           A     + ++       + +    +  S L   
Sbjct: 235 --------------RDQTVASVAAAKAAYDAARDGVEVTRAQQAEARAQLVELQSSLAKA 280

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E+  +   + +P++G +  N+  +  ++    Q +  IVP     YI A     Q++ +K
Sbjct: 281 ERDLDFTQVRAPVSG-VFSNRLVNLGDFINAGQRMANIVPLHG-VYIDANFKETQLRRLK 338

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT----- 394
            G    +    Y+  +    + +++ + P   Q       +  T  + +++ ++      
Sbjct: 339 PGQKVNISVDAYSSRK---IEGVVDSLSPAAGQVFTLLPPDNATGNFTKIVQRVPVRIRV 395

Query: 395 DLAFSDNNIELRNGFP--AEVLFTAKN 419
               +  N+ LR G     +V      
Sbjct: 396 PAEVAGENL-LRAGMSVYVDVDTRTGE 421


>gi|117621561|ref|YP_854884.1| HlyD family secretion protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562968|gb|ABK39916.1| HlyD family secretion protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 350

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 113/375 (30%), Gaps = 82/375 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           +  V  I S  SG I +  V +   +  G  +   +D E    +   +  +         
Sbjct: 42  QSEVTGIGSKLSGYISEVLVTDNQPVKAGQLIARLDDREYKTKVAEAEADL--------- 92

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                                                 ++      ++  +   +L+ +R
Sbjct: 93  --------------------------------------RLNQATAENLAATRTQQLSLIR 114

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                    E K S   A     Q+ +  +  L +++  SQ+ L++    +  +  + +E
Sbjct: 115 QA-------EAKVSSANAEQVRAQQQVRRVSQLNQRHYSSQDSLDEVRAGLQVNQAQEQE 167

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                +     +  L  EA                QNQ   A   ++L   +       +
Sbjct: 168 AKAALQAARERLLVLDAEAK---------------QNQAKLALSAAQLEQAKLELAYTEL 212

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G I   +S  +  Y Q    +  +VP  +  ++ A     Q+ H++ G    V  
Sbjct: 213 RAPADGII-GKRSLRAGLYVQSGMQVASLVPL-QQVWVEANFKETQLLHMQPGQKVEVIL 270

Query: 353 PHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             Y D      + II+ + P           +      T+    V +KI          +
Sbjct: 271 DAYPDQ---PVEGIIDSLAPATGAKFALLPPENATGNFTKIVQRVPVKIRIPEPGPLAGK 327

Query: 405 LRNGFPAEVLFTAKN 419
           L  G   EV+   ++
Sbjct: 328 LLPGLSTEVIVDTRS 342


>gi|118581309|ref|YP_902559.1| secretion protein HlyD family protein [Pelobacter propionicus DSM
           2379]
 gi|118504019|gb|ABL00502.1| secretion protein HlyD family protein [Pelobacter propionicus DSM
           2379]
          Length = 329

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 87/278 (31%), Gaps = 10/278 (3%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            G+  +    V       +   L  +    R+      DL  K+   R  +   ++ L  
Sbjct: 61  EGEMVTAGQLVAQLEDDELREELNTRSAEQRAARAMLADL--KAGSRREEIRQGEEVLAR 118

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +   E+ +     + +  R       EL      + +    + E  +   L       +
Sbjct: 119 TRAEAERLSRDALRMEKLYRRDVIPLRELEAARAGRDSSAAAVREAEERLRLLRIGPRPD 178

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
             R+            + L++ E       + +P AG I+   +  +        P++ +
Sbjct: 179 AVRERS---ARVEAAEAGLSLAETRLSHSILNAPAAGLILSKHA-EAGEMLAPGSPVLTL 234

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                  ++RA +    +  V  G  A V    +           +  I         N+
Sbjct: 235 G-VMDQVWLRAYIPEGDLGRVVVGQKARVSVDSWPGRSFP---GRVSFISSQAEFTPKNV 290

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           QT++    ++    +   +  +EL+ G PA+ L    +
Sbjct: 291 QTEKERVKLVYRIKITLDNPKMELKPGMPADALIETSS 328



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 41/130 (31%), Gaps = 8/130 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA--LDFLN 121
            G + +  V+ G  +  G  +   ED E  + ++ +    +  R  +   K+    + + 
Sbjct: 51  GGRMSRRLVDEGEMVTAGQLVAQLEDDELREELNTRSAEQRAARAMLADLKAGSRREEIR 110

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              +VL +     E    D L         V         R L+       S      + 
Sbjct: 111 QGEEVLARTRAEAERLSRDALRMEKLYRRDVIP------LRELEAARAGRDSSAAAVREA 164

Query: 182 ENKSSLLRAL 191
           E +  LLR  
Sbjct: 165 EERLRLLRIG 174


>gi|146276018|ref|YP_001166178.1| secretion protein HlyD family protein [Novosphingobium
           aromaticivorans DSM 12444]
 gi|145322709|gb|ABP64652.1| secretion protein HlyD family protein [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 356

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/316 (12%), Positives = 90/316 (28%), Gaps = 34/316 (10%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K  +  +  +   L  + + +E Q +       +     F          +     R+ +
Sbjct: 65  KQDIVSVAGEVTGLVTSVKVKENQHVKAGDVLFTIDPSSFTVATRQADAQIASAQARVIA 124

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +  +        +  R  L+  Q +    K L ++   ++  ++  E             
Sbjct: 125 LNADVTAKAADLAGARDDLALAQANYAREKALMDRGFNTRARMDAAE-----------HA 173

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +   ++ +  I    ++A  E A         +       A   +         E+  + 
Sbjct: 174 VATARDRIVSIQAEVEQARAELAQ-----GSQVPGVNPEIAAAQANRAKAALDVERTVVR 228

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +                P++ IV       I A      + H++ G  A +   
Sbjct: 229 APADGIVTQVTRLQIGQMVFPGVPMLSIV-RDGGARIEANFKETDLNHMRPGQRADIEID 287

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQ----------EYYEVILKITDLAFSDNNI 403
            Y  ++    K  +E I      + + L  Q          +   V + I D +      
Sbjct: 288 AYPGLK---LKGRVESIGAGTGSEFSVLPAQNATGNWVKVIQRVPVRIAIEDKSPR---- 340

Query: 404 ELRNGFPAEVLFTAKN 419
            L  G  ++V      
Sbjct: 341 PLIAGLSSDVTVHVGK 356



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 64/187 (34%), Gaps = 22/187 (11%)

Query: 10  KRNHPASLKRMTLLSI--IGIIGLITWSILLPIEISVSSSGEILNEDN--VVEIKSPFS- 64
           +R   +   R  L+++  I  IG   W             G +  ++     +I S    
Sbjct: 22  ERRTRSKRLRTVLMALGPILAIGGGLWYWFGR-------PGVVETDNAYIKQDIVSVAGE 74

Query: 65  --GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS-----AL 117
             G++   +V+    +  G  L T +    T         I + +  +    +     A 
Sbjct: 75  VTGLVTSVKVKENQHVKAGDVLFTIDPSSFTVATRQADAQIASAQARVIALNADVTAKAA 134

Query: 118 DFLNNKYDV-LEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           D    + D+ L +A  +RE+ L+D  F  +     ++           S++ ++ + R+ 
Sbjct: 135 DLAGARDDLALAQANYAREKALMDRGFNTRARMDAAEHAVATARDRIVSIQAEVEQARAE 194

Query: 175 YLNRLDL 181
                 +
Sbjct: 195 LAQGSQV 201


>gi|188534199|ref|YP_001907996.1| HlyD family secretion protein [Erwinia tasmaniensis Et1/99]
 gi|188029241|emb|CAO97115.1| HlyD family secretion protein [Erwinia tasmaniensis Et1/99]
          Length = 362

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 81/265 (30%), Gaps = 13/265 (4%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + +     ++        + + +     A++  +Q  L   K    K A+    +    
Sbjct: 98  RQRVHQSSAQLNMKKAALANNQQQRRSAEAVIKRNQAALQNAKAQALKGALDLKRVENLV 157

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                S  E   +      ML  + +      +   +    I  +    +   A+  + L
Sbjct: 158 ADGSLSVRERDASRASNSQMLAGVEQAQATLEVSRQDLETTIV-NRASLEADVANAQAAL 216

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            + +   +   I++P  G +          Y      L  +VP     ++ A +   Q+ 
Sbjct: 217 ELAQIDLDNTKIIAPRDGQLGQIAVR-QGAYVTAGTRLTSLVPQ--QMWVIANLKETQMA 273

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEV--ILKIT 394
            ++ G   +         R   F   +E I P    +      +  T  + ++   + + 
Sbjct: 274 RIRPGLPVSFSVDALDGER---FNGEVEYISPAAGSEFSAISPDNATGNFVKIAQRIPVR 330

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
               SDN   LR G   EV     +
Sbjct: 331 IKITSDNAARLRPGMSVEVSIDTAD 355



 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 91/252 (36%), Gaps = 20/252 (7%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S+   + ++++G++ ++    L P      S+        V  I    SG I    V + 
Sbjct: 21  SIALGSGIALVGVLVILYAWQLPPFTSQTQSTENAYVRGQVTFISPQVSGYITAVNVLDF 80

Query: 76  SQILQGTPLLTFEDI-------ETTDLIDLKKVSIKN-----LRCHIDTEKSALDFLNNK 123
             + +G  L+  +D        +++  +++KK ++ N            +++     N K
Sbjct: 81  QPVHRGDLLMKIDDRIYRQRVHQSSAQLNMKKAALANNQQQRRSAEAVIKRNQAALQNAK 140

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFN-------YGISSVYRSLKMKLTRMRSIYL 176
              L+ A + +  + L   G                   G+     +L++    + +  +
Sbjct: 141 AQALKGALDLKRVENLVADGSLSVRERDASRASNSQMLAGVEQAQATLEVSRQDLETTIV 200

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           NR  LE   +  +A L   Q DL   K +  ++      +  ++     +   L   + +
Sbjct: 201 NRASLEADVANAQAALELAQIDLDNTKIIAPRDG-QLGQIAVRQGAYVTAGTRLTSLVPQ 259

Query: 237 QKNMLRHINELY 248
           Q  ++ ++ E  
Sbjct: 260 QMWVIANLKETQ 271


>gi|254699428|ref|ZP_05161256.1| HlyD family secretion protein [Brucella suis bv. 5 str. 513]
 gi|261749879|ref|ZP_05993588.1| secretion protein HlyD family protein [Brucella suis bv. 5 str.
           513]
 gi|261739632|gb|EEY27558.1| secretion protein HlyD family protein [Brucella suis bv. 5 str.
           513]
          Length = 405

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 89/289 (30%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 129 IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 188

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++   L     +  +   +I+ L          
Sbjct: 189 TMARVQKLHETRFVAQSELDNAQSALDQARARLAGADAQIASAKANISVL---------- 238

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                     +   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 239 -----EAQYNEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 292

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P     
Sbjct: 293 IAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAV 348

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++IT    +  + + R G    V    +
Sbjct: 349 FSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKTRAGLSVIVDVDTR 397



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 65/257 (25%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +   +  +    +D     +       +
Sbjct: 97  VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 156

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 157 RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSALDQ 216

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+          +   S+L A  +        ++ L    A                
Sbjct: 217 ARARLAGADAQIASAKANISVLEAQYNEAASSTKSLE-LARDKAARDLSFTSLRAPFDGV 275

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +     + I  L     L      KE      +   T    +  +   +  
Sbjct: 276 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETQLAHIKVGETAHIYVDAIDGTKFD 335

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 336 GKVASI-APASGAVFSL 351


>gi|170738457|ref|YP_001767112.1| membrane-fusion protein [Methylobacterium sp. 4-46]
 gi|168192731|gb|ACA14678.1| membrane-fusion protein [Methylobacterium sp. 4-46]
          Length = 422

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/425 (11%), Positives = 117/425 (27%), Gaps = 81/425 (19%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEIL-NEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
             + ++  +TWS++  +    +  G ++     VV+  S  SG +   +V  G +++QG 
Sbjct: 41  VALLLVSALTWSVVGRVPTRAAGEGILVSVGGRVVDAVSAASGRLAAIEVAAGDRVVQGQ 100

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
           P+      +  +            R     E                            +
Sbjct: 101 PVARIAQTDIEE------------RHRAAVE----------------------------V 120

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            +            +     +      ++   +   +   ++       +     ++  +
Sbjct: 121 HREREREHATLRAKVKDELAAKARNFAKLEEAFDQIVHATDQR------IEYLSTEVRNL 174

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + L  K   ++  +  + R +     E R+   + +N +  +     +   +    L++ 
Sbjct: 175 ETLLGKGITTRRVVEDRRRELT----EARQRREDAQNEVLKLRTQKTDLETQRERELQDS 230

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              L   +R       +L           +LSPI G ++  +  S  +      P++ + 
Sbjct: 231 QFRLNDTRRQMEQLAGELG------RNTQVLSPIDGRVLEVKV-SPGSVLTVGMPVIAVE 283

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQDN- 379
              K       +   + + VK G    +                +  I   PI  Q    
Sbjct: 284 SEGKALEAVVYIPADKGKTVKPGMETRLEPSTVKREEYGTLVGSVVSISDFPITPQGMAA 343

Query: 380 -----------NLQTQEY-YEVILKITDLAF--------SDNNIELRNGFPAEVLFTAKN 419
                      + +   Y   V L+                 ++ L +G       T + 
Sbjct: 344 VLHNDRLVSRFSQEGAPYAALVRLQPDPATASGYAWAVGRGPDLRLTSGTLVRAEITTRQ 403

Query: 420 TTLAQ 424
                
Sbjct: 404 HRPLD 408


>gi|326799088|ref|YP_004316907.1| secretion protein HlyD [Sphingobacterium sp. 21]
 gi|326549852|gb|ADZ78237.1| secretion protein HlyD family protein [Sphingobacterium sp. 21]
          Length = 370

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/368 (10%), Positives = 110/368 (29%), Gaps = 70/368 (19%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    SG IK+ +V +   + +G  L+  +D +    +   + S+ + + +     +   
Sbjct: 61  VIPRVSGYIKEVRVSDNQMVHKGDTLVILDDRDYQVSLAQAEASLASAQSNAHVAGAG-- 118

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                                                        +++    + +  +N 
Sbjct: 119 ---------------------------------------------IQVAQANINTSQVNV 133

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             +E +    +  L   + D    +NL + ++++Q    +       +  +L     +++
Sbjct: 134 NTVEAQIESAKVNLWRAENDFKRYENLIKDHSITQQQYEEALATKQLAQRQLDVLQTQKQ 193

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           +  R    +  + ++         +      + T     +++   +       I + I G
Sbjct: 194 SAARQAAAVGTQKSVS--------AGQASVAEATIKQREAEVEAAKLNVSYTVITASIDG 245

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +          +    Q L  IVP ++   I A     Q+  +K G   +++   Y D 
Sbjct: 246 QVGKVNL-QPGQFLGAGQSLFNIVPTTEKWVI-ANFKETQLTKMKTGQKVSIKVDAYPDS 303

Query: 359 REKKFKAIIEKIDPIISQQD----NNLQTQEYYE------VILKITDLAFSDNNIELRNG 408
                + ++    P           +  +  + +      V +   +    +   ++R G
Sbjct: 304 T---LEGVVASFSPATGAAQSLLPPDNASGNFVKVVQRIPVRIDFNEGQSPELIQKIRTG 360

Query: 409 FPAEVLFT 416
               V   
Sbjct: 361 MNVLVDVH 368


>gi|308071127|ref|YP_003872732.1| membrane-fusion protein [Paenibacillus polymyxa E681]
 gi|305860406|gb|ADM72194.1| Membrane-fusion protein [Paenibacillus polymyxa E681]
          Length = 448

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/356 (12%), Positives = 112/356 (31%), Gaps = 54/356 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I+   +  G ++ +G  L T +  +  D I   + S +    ++   +S        
Sbjct: 72  SGKIQSINLTVGQKVSKGDTLFTIDQKDLQDAIKQSQESYQVALANLKQAESGAA----- 126

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                            +     S+    + +          + 
Sbjct: 127 -------------------------------QSVQQAESSVDQAKSALVQQDNTITQAQT 155

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHEQKNMLR 242
                ++ +   Q  L   + LF   A+SQ++L Q +    ++   +    I        
Sbjct: 156 SLVDAQSSVRDAQNTLNRNQQLFSAGALSQSELEQSQIAHRRALTAVENAQITLHNAQTS 215

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
             +     +N + +  L +    ++  + +     S L           + +PI+GTI  
Sbjct: 216 KESAQTTYSNAQKSLRLAQQKTGIDVARASVNQAKSSLDTARSQLVDSVVKAPISGTI-S 274

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
             + +          +  I  ++     +  V+  ++  ++ G + TV          K+
Sbjct: 275 VVTGTQGQMVSAQSAVATIA-NTNPIIAKVNVSESELLKLQVGSSVTVGVDSLD----KR 329

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            +A +  ++P++            Y V + +      + + EL++G    V   ++
Sbjct: 330 IEARVSAVNPVMDNDLKA------YPVEISVP-----NGSGELKSGMVVTVYMKSE 374


>gi|300854723|ref|YP_003779707.1| hypothetical protein CLJU_c15410 [Clostridium ljungdahlii DSM
           13528]
 gi|300434838|gb|ADK14605.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 350

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/357 (13%), Positives = 102/357 (28%), Gaps = 77/357 (21%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I   +V  G  I  G  L+T ++   + LI  +  S   +    +  K+A    ++  
Sbjct: 60  GKITAIKVAEGDSIKNGQVLITIDN---SSLIAKEAQSKAQIDAATEQMKAAQAAKSSAQ 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L+KA      + +D                                            
Sbjct: 117 AQLQKAQNGARPEEID-------------------------------------------- 132

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHEQKNMLRH 243
               ++     +     +  L+ K   ++ DL++ +  +  +  +        +   +  
Sbjct: 133 --EAKSQYDLAKSTYDRINALYSKGYAAKEDLDKAQTDMEVAQNQYDVAKDGSRPEDIAA 190

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +     +A+     Y           Q            ++      TI +P  G +   
Sbjct: 191 LQAQVSQADATIQGY-----------QAQIKQAEGGQDEVQSYINDTTITAPADGVVNQL 239

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                        PL+ +       ++   +    +  VK      V+ P Y + +   F
Sbjct: 240 NV-EVGELVSTGMPLLVMTNTVAP-WVECDIKETDLSKVKLNEEVPVKIPAYPNQK---F 294

Query: 364 KAIIEKI--DPIISQQDNNLQTQEY----YEVILKITDLAFSDNNIELRNGFPAEVL 414
           K  I +I  D   + +       ++    Y + +++ D+     N  L  G  A V 
Sbjct: 295 KGKIVRINKDADFAVKRATNDNGDFDIVSYGIKVELIDM-----NKPLHAGMTAFVD 346


>gi|317047655|ref|YP_004115303.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
 gi|316949272|gb|ADU68747.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
          Length = 362

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 96/311 (30%), Gaps = 23/311 (7%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +  + F++ +      +    + Q ++      +   +++   +      L MK   + +
Sbjct: 59  RGQVTFISPQVSGYLTSVNVVDLQPVEKGQLLMTIDDRIYRQRVHQAQAQLAMKQAALNN 118

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               R   +      +A L + +          +       DL + E +    +L +RE 
Sbjct: 119 NQQQRKSAQATIVSNQASLDNAKAQA------LKSGF----DLKRVENLTADGSLSVRER 168

Query: 234 --IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                     +      +         L+ +  +    +   A+  + L + E       
Sbjct: 169 DATRAADAQAQAQVRQAEAQLAVAQQNLQTVIVNRASLEGDVANAQAALELAEIDLANTR 228

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I++P  G +          +      L  +VP +K     A +   Q+  ++ G   T+R
Sbjct: 229 IIAPDNGQLGQLSVR-KGTFVTAGTRLTSVVPDNKWVI--ANLKETQLARIRPGLPVTIR 285

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE-LR 406
                  R       +E I P    +      +  T  + ++  +I        +++ LR
Sbjct: 286 VDALDGKRY---DGTVEFISPAAGSEFSAISPDNATGNFVKIAQRIPVRIKVHGDLQALR 342

Query: 407 NGFPAEVLFTA 417
            G   EV    
Sbjct: 343 PGMSVEVDIDT 353



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 87/253 (34%), Gaps = 22/253 (8%)

Query: 16  SLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           S+   + + ++G++ ++  W +  P   ++ S+        V  I    SG +    V +
Sbjct: 22  SIAAGSGIVLVGVLVILYAWQLW-PFTSTIQSTENAYVRGQVTFISPQVSGYLTSVNVVD 80

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L+T +D      +   +  +   +  ++  +             + + ++ 
Sbjct: 81  LQPVEKGQLLMTIDDRIYRQRVHQAQAQLAMKQAALNNNQQQRKSAQATIVSNQASLDNA 140

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRS-------------------LKMKLTRMRSIY 175
           + Q L          +   +  +S   R                    L +    ++++ 
Sbjct: 141 KAQALKSGFDLKRVENLTADGSLSVRERDATRAADAQAQAQVRQAEAQLAVAQQNLQTVI 200

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           +NR  LE   +  +A L   + DL   + +   N      L+ ++     +   L   + 
Sbjct: 201 VNRASLEGDVANAQAALELAEIDLANTRIIAPDNG-QLGQLSVRKGTFVTAGTRLTSVVP 259

Query: 236 EQKNMLRHINELY 248
           + K ++ ++ E  
Sbjct: 260 DNKWVIANLKETQ 272


>gi|51894409|ref|YP_077100.1| putative membrane efflux protein [Symbiobacterium thermophilum IAM
           14863]
 gi|51858098|dbj|BAD42256.1| putative membrane efflux protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 359

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 57/176 (32%), Gaps = 17/176 (9%)

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E   E         ++I   L           ++L +   + E   I +P  G ++  + 
Sbjct: 127 EALLEQGAVSQQQAEQIRTQLTLANAQVEAARAQLELATSSYEGARITAPADG-VLAARY 185

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                      PL ++V       + A V    I  V+ G   TV  P       + F  
Sbjct: 186 VEPGGMVGAGSPLFQLV-DLSTVVVEAGVAEAAINAVRPGVAVTVSVPALN----RTFTG 240

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +E + P +  Q  +      Y V + +      + +  L+ G  AEV+      T
Sbjct: 241 EVESVSPQMDLQTRS------YRVRVTLP-----NPDGVLKGGMFAEVIIPLAEQT 285



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 42/116 (36%), Gaps = 4/116 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED---IETTDLI 96
           +  +  +SG++    N+  I +   G +     + G  + +G  L+  +D          
Sbjct: 47  LTATSRASGQLSPIRNI-TITAKVPGKVVAVHKQMGDTVQEGDLLVELDDKDLASQLAAA 105

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +    +  R     + S L+ L  +  V ++  E    QL     +  +  +++
Sbjct: 106 QAQYTQAQAQRAEAARQASRLEALLEQGAVSQQQAEQIRTQLTLANAQVEAARAQL 161


>gi|313672509|ref|YP_004050620.1| hypothetical protein Calni_0544 [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939265|gb|ADR18457.1| hypothetical protein Calni_0544 [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 385

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 71/409 (17%), Positives = 145/409 (35%), Gaps = 39/409 (9%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +L+++ I+ L         +  +  SG I  ++  +  K P  G+I++     G  IL+ 
Sbjct: 4   ILTLLFIVVLTI--SCTKNDNKIVISGRIEADEINLSFKYP--GMIEEINFSEGDFILKD 59

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE----KSALDFLNNKYDVLEKAFESREEQ 137
           T L   +  +    I+  K+    +   +D +    +SAL+ L       +   +S   +
Sbjct: 60  TILAKIKANDIKAQINRSKLEENTVSTALDAKYLQYQSALNRLEQLKIKKQFLNDSINNE 119

Query: 138 LLDFLGKYHSTCSKVFNYGISSV-----YRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +L       +   K+    I+       Y  +K    R + +Y      + K   +  L 
Sbjct: 120 ILMAENNVKNADHKLKIDKINIQKAMANYEKVKNDYERFKVLYNENAIPKQKFDEIETLH 179

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNMLRHINELYD 249
              + DL++ +   +   +S+ +    +  +  S     E+     E K   + I  +  
Sbjct: 180 KISKDDLSLAEESLK---ISEKNYLSAQNSLAISKARKKEIEAIEKEIKAAEKDIGIIKK 236

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E ++   N LK I            +  ++LT         TI +P    I+  + F   
Sbjct: 237 EIDITSLNKLKTI------------EVTNELTSHMDD---TTIKAPNN-LIITRKFFQKG 280

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                 Q L  +  + +  Y R  +    +  +K      ++   Y D   K FK  I  
Sbjct: 281 EIIAAGQSLA-VGYNPEEIYFRGFIPEPLLGKIKLNMEGELKIDSYPD---KSFKGKITF 336

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           I+        ++QT +     + +       N   L+ G PA+ +   +
Sbjct: 337 INSRSEFTPKDVQTPQERVKQVFLIKAKIDHNENILKPGMPADFIIKTE 385


>gi|307944298|ref|ZP_07659639.1| hypothetical protein TRICHSKD4_2955 [Roseibium sp. TrichSKD4]
 gi|307772644|gb|EFO31864.1| hypothetical protein TRICHSKD4_2955 [Roseibium sp. TrichSKD4]
          Length = 426

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 63/425 (14%), Positives = 146/425 (34%), Gaps = 51/425 (12%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S K +  +     +  I+ +I + +       G++  +  +  I +P +G I +  V   
Sbjct: 29  STKIIVFVLSTTFLSAISLAISVKLPEIRKVKGQVRAQGLIANIAAPRAGRILEVMVSRD 88

Query: 76  SQILQGTPLLTF-EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
             + +  PL+    D+   +  D  ++  + ++  I   ++      +K  + ++     
Sbjct: 89  ESVKKNQPLIAIGTDLVREEKGDANEIERERIKKRILQLENQKTNFEDKLLLEQETHAVT 148

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             QL +       +  K     IS   + LK K  R+++++   +  E++      LL  
Sbjct: 149 TRQLAN-----EESTHKHLLRTISGEEKLLKQKCDRLQTLHDRGVVSEDQRET--CLLKI 201

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           +  +   ++         +  L   +R   +     +E     +N +  +    D  +LE
Sbjct: 202 NDTEQRHIRE--------KLGLLHLQRNTEEQKKRNQETTSALQNDITKVMAEIDLLSLE 253

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             +                             R+  T+L+P  G + + ++   S+    
Sbjct: 254 LLDLEN--------------------------RDSITLLAPFNGFVTHIRTQKGSSVFSN 287

Query: 315 SQPLMKIVPHSKL---TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
             PL++I    +     +    V  + ++ V  G+   +    +       F A+I  I 
Sbjct: 288 GAPLIQISQDHREQGGFFTEFVVQSRNLRDVAVGHAVRIELVTFDVSEWGTFPAVITNIS 347

Query: 372 ----PIISQQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTAKNTTLAQE 425
               P ++    + + +  + +       A  D  I  +LR+G       +     L   
Sbjct: 348 ETGLPNLNLPSQSAEDKPSFLIEAAFNRDATFDREILPKLRDGLEVTGFISIDQRPLISW 407

Query: 426 IIHPI 430
           II PI
Sbjct: 408 IIEPI 412


>gi|253700229|ref|YP_003021418.1| secretion protein HlyD [Geobacter sp. M21]
 gi|251775079|gb|ACT17660.1| secretion protein HlyD family protein [Geobacter sp. M21]
          Length = 366

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 50/311 (16%), Positives = 91/311 (29%), Gaps = 24/311 (7%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +S +  + ++   L +     + Q +             +    +S   S++M       
Sbjct: 65  ESHVHSIASRVPGLVQRVAVVDNQFVRKGDLLVELDPSDYRARENSAAASVEMAKNETSG 124

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
            Y           L  A L     DL   + L+ K  + +  L +Q      + ++L+E 
Sbjct: 125 DYAQVESARANIGLAAARLEQANLDLRRAEALYAKEVIPREQLERQRTAHRIAQMQLKEA 184

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              ++     I                             A++ ++L           I+
Sbjct: 185 QEAERKAKAMIG-----------------ISGTGSKDARVAEKQAELETARLNLSYTRIV 227

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +         NY Q  Q LM +VP     +I A     Q+  V+ G +      
Sbjct: 228 APGDGFVTRKGV-EPGNYVQPGQALMAVVPLEGA-WITANYKESQLAKVRPGQSVEFTVD 285

Query: 354 HYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNG 408
            Y       K ++I+       S       T  Y +V     ++I     SD    LR G
Sbjct: 286 TYPGRNFTGKVESIMAGTGAAFSLLPPENATGNYVKVTQRIPVRIAIDRGSDPEHLLRIG 345

Query: 409 FPAEVLFTAKN 419
                      
Sbjct: 346 MSVVPTILTDQ 356



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 66/210 (31%), Gaps = 13/210 (6%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNE-----DNV 56
           +H      +R      +   +L  I +IG       L +   V S   I  +      +V
Sbjct: 14  NHPAPDGERRGLNKRQRGGIVLLAIIVIG-----AFLGVHRWVRSKTHIETDNAFIESHV 68

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I S   G++++  V +   + +G  L+  +  +     +    S++  +     + + 
Sbjct: 69  HSIASRVPGLVQRVAVVDNQFVRKGDLLVELDPSDYRARENSAAASVEMAKNETSGDYAQ 128

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHST---CSKVFNYGISSVYRSLKMKLTRMRS 173
           ++       +     E     L      Y        ++     +     +++K  +   
Sbjct: 129 VESARANIGLAAARLEQANLDLRRAEALYAKEVIPREQLERQRTAHRIAQMQLKEAQEAE 188

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +   + +    A ++  Q +L   +
Sbjct: 189 RKAKAMIGISGTGSKDARVAEKQAELETAR 218


>gi|206891108|ref|YP_002247972.1| efflux transporter, RND family, MFP subunit [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206743046|gb|ACI22103.1| efflux transporter, RND family, MFP subunit [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 386

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 80/255 (31%), Gaps = 52/255 (20%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             ++    +  + ++        L   ++ L   + LF ++ +++++L+  E     +  
Sbjct: 97  NELKQSEADLYNAKSNLFKSEVSLKDAERTLKRKQELFNRDFIARSELDDAETAYNTAKA 156

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +    I + K     + +                                          
Sbjct: 157 QYEIAIAQLKKAEAGLRQAKT------------------------------------NLG 180

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              I+SP+ G ++             S     L  I P      +   V    I  +K G
Sbjct: 181 YTRIVSPVNGVVIAKNV-EVGQTVAASFQTPTLFTIAPDLTKMQVDTNVDEADISKIKNG 239

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
             AT     Y+D + K   A I ++ P ++Q          Y+V++ +      + ++ L
Sbjct: 240 MEATFTVDAYSDRKFKGVVAQI-RLSPTVTQNVVT------YDVVIAVD-----NTHLLL 287

Query: 406 RNGFPAEVLFTAKNT 420
           + G  A V F A+  
Sbjct: 288 KPGMTANVTFVAQEK 302



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 55/142 (38%), Gaps = 7/142 (4%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +V+++G +     +  + +  SG I     +  S + +G  +   +     + +   + 
Sbjct: 46  QTVTATGNVNPVTTI-LVGTRVSGTIVALYADYNSLVKKGQLIAQIDPTPFENELKQSEA 104

Query: 102 SIKNLRCHI----DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            + N + ++     + K A   L  K ++  + F +R E  LD     ++T    +   I
Sbjct: 105 DLYNAKSNLFKSEVSLKDAERTLKRKQELFNRDFIARSE--LDDAETAYNTAKAQYEIAI 162

Query: 158 SSVYRSLKMKLTRMRSIYLNRL 179
           + + ++         ++   R+
Sbjct: 163 AQLKKAEAGLRQAKTNLGYTRI 184


>gi|289669180|ref|ZP_06490255.1| membrane fusion protein RaxA [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 403

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 102/314 (32%), Gaps = 14/314 (4%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD----L 181
           VLE        +         +   ++    ++ +    +M+            D    +
Sbjct: 89  VLEAEHRDDRGRPTRRAAAVLAEQQRLAVEAMAQLRAQGRMQQQAAARALAGLRDRLQQV 148

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +  LLR      Q      +    +  VSQ  +++++  V    L+ R +  E +   
Sbjct: 149 DAELDLLRHRQQLTQSIEQRYRTALTRGLVSQQFVDEKQADV----LDQRTHTLEVERER 204

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             + +   +A +E       + + L        ++  +  I +    +  + +P AG + 
Sbjct: 205 MALADALAQAQVELQQLPSSLRQQLAIAGAGLQEDR-RAAIEQAAASRWEVRAPRAGRM- 262

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +         Q Q L  ++P S  T +           +  G    +RF         
Sbjct: 263 ALRPLQRGQAVVQGQRLADLLPTSIATEVVLYAPSGAAGLIGPGMPVQLRFDALPYQHYG 322

Query: 362 KFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNI--ELRNGFPAEVLFTA 417
           +F   + +I   P  ++ D+   ++  Y V +++   A         LR G   +     
Sbjct: 323 QFAGRVVEIAAAPEPARVDSASASEPLYRVRVRLAGDAALRTGRMAVLRPGMRVQGTLAL 382

Query: 418 KNTTLAQEIIHPIT 431
           +    +Q    P++
Sbjct: 383 EWRRFSQWAFEPLS 396


>gi|186473311|ref|YP_001860653.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
 gi|184195643|gb|ACC73607.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
          Length = 374

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 53/420 (12%), Positives = 124/420 (29%), Gaps = 84/420 (20%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             K+        + ++S+I +I   T S    +   V ++ +     +V  +    +G +
Sbjct: 15  AAKQARSIPWMLLAVISVIVVIAAAT-SYWFFVGRFVETTDDAYVGGDVTVLAPKVNGFV 73

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V++   +  G  L+  +               ++    +    + +         L
Sbjct: 74  SDVLVQDNQYVTAGQVLIRLD--------------ARDYDARLAQADAEVASAEAAVTEL 119

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E     +   + +   +  ++ +++      SV                           
Sbjct: 120 EAKKSLQLATINEQGAEVRASNAELTRSASDSVR-------------------------- 153

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                          + L + +AVS   + + +  + K+   +  +        R +  L
Sbjct: 154 --------------YRQLVKDDAVSNQVVERADADLAKAHASVDRSSAALTAAQRQLAVL 199

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                             +       A  ++   +     E  TI +PI G +  N++  
Sbjct: 200 ---------------DAQINDAHARVATALAAQRVAALNVEYTTIRAPIDGYV-GNRTAR 243

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
               A     L+ +VP S   +I A     Q++ +K G T  V          ++ + ++
Sbjct: 244 VGVLANVGVSLLTVVPASG-LWIDANFKEDQLKKMKVGDTVDVDLDA----SSRRIEGVV 298

Query: 368 EKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           E + P          ++      T+    V +++      D    LR G  A V    + 
Sbjct: 299 ESLAPATGATFSVLPAENATGNFTKIVQRVPVRVRLSVPKDMQGVLRPGLSATVKVHLRE 358


>gi|254446717|ref|ZP_05060192.1| efflux transporter, RND family, MFP subunit [Verrucomicrobiae
           bacterium DG1235]
 gi|198256142|gb|EDY80451.1| efflux transporter, RND family, MFP subunit [Verrucomicrobiae
           bacterium DG1235]
          Length = 371

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 98/291 (33%), Gaps = 20/291 (6%)

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           S +   L    K H     V         R + ++      +  + L+L  K S    L+
Sbjct: 26  SLQPMALVATAKRHVAVRSVPGTIQVVAEREMLIRSDLQGRVLESNLELGAKVSEGDVLI 85

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           S    D+ +     +    +   + +Q        + ++E + + K           E  
Sbjct: 86  SLDLGDIEIGIEKVKIEIEAAELILEQGSSRQFDLVTVKERLADAKRRFEAGIASKSEFE 145

Query: 253 LEFAN---YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
               +     + I  +L   +   A   ++L +LE+ +E+ +I +P+ G +    ++   
Sbjct: 146 ARQRDLTEVEQAIEAELNAKEVRIAQYKNELKLLERNKEKMSIRAPMDGVVTEVLAY-RG 204

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           +     Q + KI+   +   +  KV+ +    ++ G  A V+F  Y D     F A + K
Sbjct: 205 DLIAGGQEVAKIISVDR--IVEVKVSEENFSGIELGQIARVKFLGYGDTT---FDASVSK 259

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             P+             Y V L++           L  G   E   T    
Sbjct: 260 TLPVADPLTQR------YTVHLEVDIEV-----ERLFPGLTGEATITLDER 299



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 64/182 (35%), Gaps = 12/182 (6%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSS---------SGEI-LNEDNVVEIKSPFSGI 66
           +K   +L+ IG  G    S L P+ +  ++          G I +  +  + I+S   G 
Sbjct: 7   IKLFLVLAAIGAGGFYFVSSLQPMALVATAKRHVAVRSVPGTIQVVAEREMLIRSDLQGR 66

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  +E G+++ +G  L++ +  +    I+  K+ I+     ++   S    L    + 
Sbjct: 67  VLESNLELGAKVSEGDVLISLDLGDIEIGIEKVKIEIEAAELILEQGSSRQFDLVTVKER 126

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L  A    E  +            +       ++   L  K  R+         LE    
Sbjct: 127 LADAKRRFEAGIAS--KSEFEARQRDLTEVEQAIEAELNAKEVRIAQYKNELKLLERNKE 184

Query: 187 LL 188
            +
Sbjct: 185 KM 186


>gi|16127944|ref|NP_422508.1| HlyD family secretion protein [Caulobacter crescentus CB15]
 gi|221236766|ref|YP_002519203.1| multidrug resistance protein A [Caulobacter crescentus NA1000]
 gi|13425482|gb|AAK25676.1| HlyD family secretion protein [Caulobacter crescentus CB15]
 gi|220965939|gb|ACL97295.1| multidrug resistance protein A [Caulobacter crescentus NA1000]
          Length = 396

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/377 (10%), Positives = 97/377 (25%), Gaps = 81/377 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + + V++    SG + +  V +  ++  G  L   +       +               
Sbjct: 73  VQADTVQVSPQVSGYVAEVLVADNQRVEPGQVLAKIDPSTFQARV--------------- 117

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                                              +  +            SL+  +   
Sbjct: 118 ------------------------------DQAIANAAAADAAVRAIDDKNSLEQAVIAQ 147

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           R+  +     +   +         + DL     L ++  VSQ  +        +S   + 
Sbjct: 148 RAAGVTSAQADASRA---------KADLDRYNALADQGWVSQQKVQTTRAAATQSAAGVA 198

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 +   R    L        A      +                    +   E+  
Sbjct: 199 SAQAALEAEKRAAQSLGSAKAQAIAQAAAAHAAV---------------EQAKLDLERTV 243

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P++G +V  ++       Q    LM +VP  +   + A     Q+  ++ G    ++
Sbjct: 244 IRAPVSG-VVGARAVRPGQLVQPGVALMSVVPLGQAYVV-ANFKETQVARLRIGQPVEIK 301

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDN----NLQTQEYYEVILKIT---DLAFSDNNIE 404
              +   +       ++   P   Q+            + ++  ++     +  S     
Sbjct: 302 ADAFGKEK---IVGKVDSFAPATGQEFALIPIENAVGNFTKITQRLPVKIAVDRSQLGAA 358

Query: 405 LRNGFPAEVLFTAKNTT 421
           LR G   E+    ++ +
Sbjct: 359 LRPGLSVEIKVDVRDRS 375


>gi|49474542|ref|YP_032584.1| multidrug resistance protein vceA [Bartonella quintana str.
           Toulouse]
 gi|49240046|emb|CAF26470.1| Multidrug resistance protein vceA [Bartonella quintana str.
           Toulouse]
          Length = 364

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 100/319 (31%), Gaps = 28/319 (8%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           I      L+    +  +       +++ L       +    K     +++  ++L     
Sbjct: 59  IAAIAPKLNGYIKEIAIKANQVVKKDDVLFHLDNGDYQIALKQTENCLNTQQKTLLRIDA 118

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++ + +    D + + +   A+ ++ Q  L  +  L       Q+D++  +    ++   
Sbjct: 119 QIIAAHSALDDAQAQKAAASAIATNAQLTLKRITELKANRYAPQSDVDDAKSAYEQAIAN 178

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           ++    +      +I  L                    + +             ++  + 
Sbjct: 179 VKRADAQIAAARANIQVL---------------EAQRSETESQTKSLELTREKAQRDLDS 223

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I +P  G I    + +  ++    Q L  +VP     Y+ A     Q+Q+++ G TA 
Sbjct: 224 TIIRAPFDGVIGNLTAKT-GDFVGNGQRLAALVPIH-ALYVEANYKETQLQNIRAGQTAY 281

Query: 350 VRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDN 401
           +    +   ++  F   +  I P           Q      T+    + ++++    +  
Sbjct: 282 IAVDAF---KKDVFTGTVLSIAPATGAVFSLLPPQNATGNFTKIVQRIPVRVSIPKEALK 338

Query: 402 NIELRNGFPAEVLFTAKNT 420
              +R G    V    +  
Sbjct: 339 GGRIRAGMSVSVQIDTRTK 357



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 63/170 (37%), Gaps = 19/170 (11%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
            + ++  I    +G IK+  ++    + +   L   ++        +T + ++ ++ ++ 
Sbjct: 55  VQGDIAAIAPKLNGYIKEIAIKANQVVKKDDVLFHLDNGDYQIALKQTENCLNTQQKTLL 114

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESRE---EQLLDFLGKYHSTCSKV------FNY 155
            +   I    SALD    +         + +   +++ +     ++  S V      +  
Sbjct: 115 RIDAQIIAAHSALDDAQAQKAAASAIATNAQLTLKRITELKANRYAPQSDVDDAKSAYEQ 174

Query: 156 GISSVYR---SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            I++V R    +      ++ +   R + E+++  L       Q+DL   
Sbjct: 175 AIANVKRADAQIAAARANIQVLEAQRSETESQTKSLELTREKAQRDLDST 224


>gi|224418780|ref|ZP_03656786.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Helicobacter canadensis MIT 98-5491]
 gi|253826697|ref|ZP_04869582.1| HlyD family secretion protein [Helicobacter canadensis MIT 98-5491]
 gi|313142296|ref|ZP_07804489.1| secretion protein HlyD [Helicobacter canadensis MIT 98-5491]
 gi|253510103|gb|EES88762.1| HlyD family secretion protein [Helicobacter canadensis MIT 98-5491]
 gi|313131327|gb|EFR48944.1| secretion protein HlyD [Helicobacter canadensis MIT 98-5491]
          Length = 353

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 97/301 (32%), Gaps = 29/301 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + + A   + + L     +  +   K     + S   +L       R    N  + E + 
Sbjct: 74  IKDFALVKKGQPLFQIDNRIFTQRVKEAQANLQSAESALLAYEENYRLYEANIAEKEAQI 133

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             + A L + Q +      L +  A+S+ D +  +           +   + +  ++ + 
Sbjct: 134 KSVEANLKNAQAENDRATTLIKNKALSKRDYDNAKAQFLSLQANYVQAKAQFQKAIQELE 193

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                         K     LE   +     +    +     +   I +P+ G +    +
Sbjct: 194 A------------HKTTKSSLEAGVKRANALLE---LALIDLDNSVIKAPVDGQLGEILA 238

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                +  Q   L  IVP +      A +   ++  V  G          +    K+F  
Sbjct: 239 H-IGQFVSQESALAYIVPQTHWVV--ANIKETKMDKVALGQKVHFSVDALS---GKEFSG 292

Query: 366 IIEKIDPIISQQDNNLQ----TQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTA 417
           ++E+I P    + + ++    T  + +VI    +KI   + ++   ELR G    V    
Sbjct: 293 VVEEISPATGSEFSPIRVNNATGNFIKVIQRIPVKIKIDSTNERLEELRAGMSVVVEIET 352

Query: 418 K 418
           K
Sbjct: 353 K 353



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 65/187 (34%), Gaps = 6/187 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I +  +++ + + +G PL   ++   T  +   + ++++    +   +         
Sbjct: 66  SGYITEVYIKDFALVKKGQPLFQIDNRIFTQRVKEAQANLQSAESALLAYEENYRLYEAN 125

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               E   +S E  L +   +     + + N  +S   R       +  S+  N +  + 
Sbjct: 126 IAEKEAQIKSVEANLKNAQAENDRATTLIKNKALSK--RDYDNAKAQFLSLQANYVQAKA 183

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +       L +H+      K+  E      N L +   I   +++       +   +L H
Sbjct: 184 QFQKAIQELEAHK----TTKSSLEAGVKRANALLELALIDLDNSVIKAPVDGQLGEILAH 239

Query: 244 INELYDE 250
           I +   +
Sbjct: 240 IGQFVSQ 246


>gi|152970040|ref|YP_001335149.1| putative multidrug resistance efflux pump [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|150954889|gb|ABR76919.1| putative multidrug resistance efflux pump [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
          Length = 361

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 87/301 (28%), Gaps = 29/301 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V + A     E L     + +          ++    +L+  L + +S        E   
Sbjct: 77  VKDFAIVQPGEVLFQIDDRIYKQRVHQAQATLAMKEAALRNNLQQRKSAEATIAKNEAAL 136

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              RA     Q DL  ++ L    ++S     ++      S  +   +I + K  L    
Sbjct: 137 QNARAQNLKIQADLKRIQQLTADGSLS----IRERDSARASAAQGAADIEQAKAALEMSR 192

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +  +   +   +   ++           A   + L + +   +   I++P  G +     
Sbjct: 193 QDRESTIVNRDSLEADV-----------ASAKAALELAQIDLQNTQIIAPTGGQLGQISV 241

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA--------D 357
                Y      L  +VP        A +   Q+  V+ G   T                
Sbjct: 242 R-LGAYVSAGTHLTSLVPSQHWVI--ANLKETQLAEVRVGQPVTFTVDALNGETFHGKVQ 298

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                       I P  +  +     Q    + ++IT     +N+  LR G   +V    
Sbjct: 299 SISPATGVEFSAISPDNATGNFVKIAQ---RIPVRITVNDGQNNSERLRPGMSVQVTIDT 355

Query: 418 K 418
           +
Sbjct: 356 R 356



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 52/194 (26%), Gaps = 10/194 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                  I    +G I    V++ + +  G  L   +D      +   + ++      + 
Sbjct: 57  VRGQTTFISPQVNGYITAVNVKDFAIVQPGEVLFQIDDRIYKQRVHQAQATLAMKEAALR 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                           E A ++   Q L              +  +S   R      +  
Sbjct: 117 NNLQQRKSAEATIAKNEAALQNARAQNLKIQADLKRIQQLTADGSLSIRERD-----SAR 171

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            S      D+E   + L       +  +    +L    A ++  L      + +  L+  
Sbjct: 172 ASAAQGAADIEQAKAALEMSRQDRESTIVNRDSLEADVASAKAAL-----ELAQIDLQNT 226

Query: 232 ENIHEQKNMLRHIN 245
           + I      L  I+
Sbjct: 227 QIIAPTGGQLGQIS 240


>gi|162146816|ref|YP_001601277.1| HlyD family secretion protein [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161785393|emb|CAP54941.1| putative secretion protein, HlyD-family [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 358

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 56/417 (13%), Positives = 108/417 (25%), Gaps = 92/417 (22%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL------NEDNVVEIKSPFSGIIKKFQ 71
           K + L + + ++G   W      +  V   G  +             +     G I    
Sbjct: 6   KALLLAAGVVVLGAAAWGG----DRLVLGDGVRVETNDAYVSAYSSVVAPKVGGRIDAVM 61

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            ++  Q+ +G  L   ED               + R  +   +  L         L+   
Sbjct: 62  AQDNEQVRKGEVLAHIED--------------DDYRAALTVARGNLAAARADIANLQAEL 107

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             ++  +        S  ++                                        
Sbjct: 108 ARQDALIAAARAAVQSDDAE---------------------------------------- 127

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L   Q+D    +NL    A                T E R+    Q           + +
Sbjct: 128 LVFAQQDEARYRNLAVGGA---------------GTTEQRQRTAAQTREATAAKARDEAS 172

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                     ++  + + +        +    E      TI +P+ G +V  +     NY
Sbjct: 173 VQAATQEKDVLAAQIARARGNLTRAEGEEQRAELDLSYCTIPAPVDG-VVGARGVRVGNY 231

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 LM + P      + A     Q+ HV  G  ATV    +     +  +A ++ I 
Sbjct: 232 VNPGSALMAVTPVQDAFVV-AHFQETQLTHVVPGQKATVWVDTFP---GQPLRAHVDSIP 287

Query: 372 PII----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRN----GFPAEVLFTAKNT 420
           P      +    +  T  + +V+ ++      D    L      G   EV     + 
Sbjct: 288 PATGVAFAPIQPDNATGNFTKVVQRLPVRITFDPGQPLAARVRVGMSVEVRVDTASR 344


>gi|330810840|ref|YP_004355302.1| Macrolide-specific efflux protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327378948|gb|AEA70298.1| Macrolide-specific efflux protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 382

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 72/195 (36%), Gaps = 24/195 (12%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLP--------------IEISVSSSGEILNED 54
           +KR  P     +   +++  +    W  + P              IE SV++ G +    
Sbjct: 1   MKRPRPTRRAWLLTFALLPAVAFAAWQAVAPSRAPLVTAPVTRGDIENSVTALGTLQPRR 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ +  SG I+K  VE G ++ +G  L+  +       +D  + SI+NL+  +  ++
Sbjct: 61  YV-DVGAQASGQIQKIHVEAGDEVREGQLLVEIDPSTQKARLDAGRFSIENLKAQLQEQR 119

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +  D    K         SR +Q L   G       +     + +    + M   ++R  
Sbjct: 120 AQHDLAQQK---------SRRQQQLKAGGATREEDVQTAQAEVRATQARIDMFQAQIRQA 170

Query: 175 YLNRLDLENKSSLLR 189
             +    E +    R
Sbjct: 171 QASLRSDEAELGYTR 185



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 68/195 (34%), Gaps = 5/195 (2%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            + ++     + +    S  + ++ +E     +R      + D +  K   +    S  +
Sbjct: 52  ALGTLQPRRYVDVGAQASGQIQKIHVEA-GDEVREGQLLVEIDPSTQKARLDAGRFS-IE 109

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
             + +    ++  +L +    ++  L+      +E        ++     ++  Q     
Sbjct: 110 NLKAQLQEQRAQHDLAQQKSRRQQQLKAGGATREEDVQTAQAEVRATQARIDMFQAQIRQ 169

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAK 333
             + L   E       I +P++GT+V   +          Q  PL+  +       + A+
Sbjct: 170 AQASLRSDEAELGYTRIYAPMSGTVVAVGAR-EGQTLNAQQQTPLILRIARLSPMTVWAE 228

Query: 334 VTPKQIQHVKKGYTA 348
           V+   I HVK G TA
Sbjct: 229 VSEADIGHVKPGMTA 243


>gi|326387600|ref|ZP_08209206.1| secretion protein HlyD [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207646|gb|EGD58457.1| secretion protein HlyD [Novosphingobium nitrogenifigens DSM 19370]
          Length = 376

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 55/423 (13%), Positives = 118/423 (27%), Gaps = 84/423 (19%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEIS--VSSSGEILNEDNVVEIKSPFS 64
              K      L R  +++++   GL  ++ +  +     V S+ +   + + + I S  S
Sbjct: 12  AEQKTARRRLLARAGIVALVIGGGLGIYAYVGYLNHGQYVQSTDDAYVKADGITISSKLS 71

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +   +V +   +  G  L+  +  +                      +  L   N + 
Sbjct: 72  GYVTALKVADNQAVKAGDLLVQVDPTDY---------------------RIRLAQTNAQE 110

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DV      + E  + +         + +                                
Sbjct: 111 DVARAGQATSEAAVTEAEAGVEQASAALATAQRD-------------------------- 144

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  L+ +  ++   + L    +  +  L+Q      K+  ++             +
Sbjct: 145 -------LAFYSGEVARYRPLVASGSEPKQTLDQYISNRDKAAAQVAAQKAAVDAAKGKL 197

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                                L Q         ++    +       IL+PI GT+  + 
Sbjct: 198 ASA---------------QAQLGQAASQIEAAAAQKDSAKTDLGFTRILAPIGGTVASSS 242

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 + Q  Q LM +VP  +  Y+ A     QI  ++ G   T+       +   +F 
Sbjct: 243 VR-LGQFVQPGQRLMTLVPV-QAIYVEANYKETQIGLMRPGQPVTMEVDALPGV---EFH 297

Query: 365 AIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             +  I P        +  Q      T+    V ++I   A  +    L  G   +V   
Sbjct: 298 GTVASITPGTGANFSLVPPQNATGNFTKIVQRVPVRIHIDAGPEARRVLVPGLSIKVDVD 357

Query: 417 AKN 419
             +
Sbjct: 358 TSS 360


>gi|323344095|ref|ZP_08084321.1| hypothetical protein HMPREF0663_10857 [Prevotella oralis ATCC
           33269]
 gi|323094824|gb|EFZ37399.1| hypothetical protein HMPREF0663_10857 [Prevotella oralis ATCC
           33269]
          Length = 437

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 69/436 (15%), Positives = 147/436 (33%), Gaps = 44/436 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L+    +  I + GL+  S       ++ +   I +    VE+ +  +G ++   V +  
Sbjct: 30  LQWGITVIAIVLFGLLLGSYFFKYPDTLIAPVVITSSSTPVELNAYATGKLENLFVRDKQ 89

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G  L   E+   +  +             ++         N    +L K  +    
Sbjct: 90  NVQAGDYLAIIENNANSQDV-----------LMLNKIFQKWQSKNLSSSLLYKKLKGYTL 138

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL---ENKSSLLRALLS 193
           +L D    Y      +  Y + +       KL   ++    +++L        +L A  +
Sbjct: 139 RLGDVQLPYSGFMEALQYYILYTKTNYYPQKLALKQNQLSKQVELDLNRKHEYILHAQQA 198

Query: 194 SHQKDLTMMKN-LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              K++ +  + LF K   +  + +       +S      +I  QK +         E  
Sbjct: 199 DISKNIYLRDSALFAKKIKTGEEFDNSRYTYLQSHQTQLNDIRTQKEVQMQ-KLQDREVM 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           L+     KE            AD++     ++  ++   I++PIAG +     +S +   
Sbjct: 258 LDLEQQYKETHEKSILELNRAADQLG--NAIKLWQKNYLIVAPIAGYVNMMSVWSKNQNV 315

Query: 313 QQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              + +M ++P +    I +AK        ++       R  +Y D      + I+  I 
Sbjct: 316 TAGELIMIVMPKTPTESIGKAKFPALGAGKIQINQRVITRLNNYPDEEFGFIEGIVSNIS 375

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP--------AEVLFTAKNTTLA 423
            I  +  N       Y V +K  +   ++    L    P        A+++    +  L 
Sbjct: 376 DIPDKDGN-------YIVEIKFPNHLRTNYGKNL----PQTKQILGNAQIIIK--DKRLI 422

Query: 424 QEIIHPITDNWPKIFE 439
           +  I P+     KIF+
Sbjct: 423 ENFIQPL----EKIFK 434


>gi|17227947|ref|NP_484495.1| hypothetical protein alr0451 [Nostoc sp. PCC 7120]
 gi|17129796|dbj|BAB72409.1| alr0451 [Nostoc sp. PCC 7120]
          Length = 489

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/359 (11%), Positives = 117/359 (32%), Gaps = 38/359 (10%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +++SG+++   +V  +     G++ +  VE G ++ QG  +   +  E    I   + ++
Sbjct: 65  ITASGKVVPVQSV-NLSPKNPGVLAQLYVEQGDRVEQGQIIARMDVGEIEAQIAQHRANV 123

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +D  ++                 +R +++     +     +++      +  + 
Sbjct: 124 AQAQAQLDEARAG----------------NRPQEIAQSQARLAQAQAQLAESVAGNRPQE 167

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +    +++ +          +    + L +   +   +      ++  ++ +L + ++ +
Sbjct: 168 VAKAQSQVDAAQARVNYTSEQVKRYQYLFNQGAERKQLFDQAVSEDKSARANLAEAQKQL 227

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                  R  +         + E      L       E   ++ Q Q       ++L   
Sbjct: 228 SLLQSGTRSEV--ISAKEAAVTEARAALVLSQEGSRPE---EIAQRQAAVKAAQAQLAAA 282

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYIRAKVT 335
           +       I +P +G +    +     +           S     IV  ++   I A+V 
Sbjct: 283 QVRLADTIIRAPFSGIVTQKYAN-VGAFVTPTTSASTSASATSSSIVALARGVEILAQVP 341

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
              I  +K+G    +    Y D     F+  +  I P    +    Q    ++V + I 
Sbjct: 342 EADIGRIKQGQQVEIVADAYPDE---VFQGRVRLIAPEAVIE----QGVTSFQVRVAID 393


>gi|332307176|ref|YP_004435027.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174505|gb|AEE23759.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 491

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 82/287 (28%), Gaps = 45/287 (15%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           QL         +   +      ++   L+     + S   +   L+      +   +  Q
Sbjct: 73  QLNADFNDEVRSGQVIARIDDRTILSRLRQSEADLASSKASLTQLKAALKKAQTEATLAQ 132

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++    K L  KN VS ++L+  E     + + +                L  EA +E +
Sbjct: 133 REFNRTKELRNKNLVSASELDISETSHELAKVAIETAKAAI---------LVGEARVEQS 183

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-- 314
                                S L   +   ++  I SP+ G ++  Q  +         
Sbjct: 184 Q--------------------SSLEQTKLDLDRTYIRSPVDGVVIDRQVDT-GQTVSASL 222

Query: 315 -SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            +  L  I        I A V    I  + K          + + + +   + + K   +
Sbjct: 223 SAPTLFSIAQDLVKMQIEADVDEADIGRIAKDQKVNFTVDAFPERQFRGVVSQVRKAATV 282

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +           Y+VI+ +      +  + L  G  A V       
Sbjct: 283 TNNVVT-------YKVIISV-----QNEQLLLLPGMTANVDVVLGER 317



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 88/267 (32%), Gaps = 21/267 (7%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            L  IE +V+SSG I     V  + S  SG+I +   +   ++  G  +   +D      
Sbjct: 41  SLGKIESTVNSSGTISPVVTV-LVGSELSGLISQLNADFNDEVRSGQVIARIDDRTILSR 99

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   +  + + +  +   K+AL     +  + ++ F            +     +K    
Sbjct: 100 LRQSEADLASSKASLTQLKAALKKAQTEATLAQREF-----------NRTKELRNKNLVS 148

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVS 212
                      +L ++         L  ++ + ++  S  Q  L + +          V 
Sbjct: 149 ASELDISETSHELAKVAIETAKAAILVGEARVEQSQSSLEQTKLDLDRTYIRSPVDGVVI 208

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL-----E 267
              ++  + +    +     +I +    +  I    DEA++      ++++  +      
Sbjct: 209 DRQVDTGQTVSASLSAPTLFSIAQDLVKM-QIEADVDEADIGRIAKDQKVNFTVDAFPER 267

Query: 268 QNQRTFADEMSKLTILEKTREQKTILS 294
           Q +   +      T+       K I+S
Sbjct: 268 QFRGVVSQVRKAATVTNNVVTYKVIIS 294


>gi|114330497|ref|YP_746719.1| RND family efflux transporter MFP subunit [Nitrosomonas eutropha
           C91]
 gi|114307511|gb|ABI58754.1| efflux transporter, RND family, MFP subunit [Nitrosomonas eutropha
           C91]
          Length = 498

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 67/204 (32%), Gaps = 19/204 (9%)

Query: 217 NQQERIVYKSTLELRENIHEQKNML--RHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + ++ +  L L + I++++  L    I    D    +       I+  L   +    
Sbjct: 234 LRSQYLLARKRLVLAQTIYDREEQLWREKITAKQDYLVAQQQREEASIATQLAAERLRAL 293

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
               +  +  +      I SPI+G ++     +     ++ +    IV      +   +V
Sbjct: 294 GVQPESGLSWENIAHYKIRSPISGIVIDEAIVT-GEVVKEDKT-AYIVADISTVWAAVRV 351

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
            P+ +  V  G  A +R   Y   R    +  +  +  ++ +Q               I 
Sbjct: 352 FPRNLHQVHIGQQAVIRANAYDLTR----EGKVIYVTTLLDEQTRTA-----------IA 396

Query: 395 DLAFSDNNIELRNGFPAEVLFTAK 418
            +   + + + R G   +     +
Sbjct: 397 RVQLDNRDEQWRPGMFVKADLQTE 420


>gi|310767258|gb|ADP12208.1| putative RND efflux system, membrane fusion protein [Erwinia sp.
           Ejp617]
          Length = 362

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 86/289 (29%), Gaps = 15/289 (5%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           ++LDF   +        +  I    + +     ++        + + +     A++  ++
Sbjct: 76  EVLDFQPVHRGDLLMTIDDRI--YRQRVHQSAAQLNMKKAALANNQQQRRSAEAVIKRNE 133

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             L   K    K  +    +         S  E   +      ML  + +      +   
Sbjct: 134 AALHNAKAQALKGGLDLKRVENLAADGSLSVRERDASRASNSQMLAGVQQAQATLEVSRQ 193

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           +    I  +    +   A+  + L + +   +   I +P  G +          Y     
Sbjct: 194 DLQTTIV-NRASLEADVANAQAALELAQIDLDNTRISAPRDGQLGQIAVR-QGAYVTAGS 251

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  +VP     ++ A +   Q+  ++ G   +           + F   +E I P    
Sbjct: 252 RLTSLVPQ--QMWVIANMKETQMARIRPGLPVSFTVDALD---GEGFNGEVEYISPAAGS 306

Query: 377 Q----DNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +      +  T  + ++   + +      DN   LR G   EV     +
Sbjct: 307 EFSAISPDNATGNFVKITQRIPVRIKITGDNAARLRPGMSVEVTINTAD 355



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 19/171 (11%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIK 104
               V  I    SG I   +V +   + +G  L+T +D        ++   +++KK ++ 
Sbjct: 57  VRGQVTFISPQVSGYITAVEVLDFQPVHRGDLLMTIDDRIYRQRVHQSAAQLNMKKAALA 116

Query: 105 N-----LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN----- 154
           N            +++     N K   L+   + +  + L   G                
Sbjct: 117 NNQQQRRSAEAVIKRNEAALHNAKAQALKGGLDLKRVENLAADGSLSVRERDASRASNSQ 176

Query: 155 --YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              G+     +L++    +++  +NR  LE   +  +A L   Q DL   +
Sbjct: 177 MLAGVQQAQATLEVSRQDLQTTIVNRASLEADVANAQAALELAQIDLDNTR 227


>gi|264677050|ref|YP_003276956.1| secretion protein HlyD [Comamonas testosteroni CNB-2]
 gi|262207562|gb|ACY31660.1| secretion protein HlyD [Comamonas testosteroni CNB-2]
          Length = 406

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/370 (12%), Positives = 105/370 (28%), Gaps = 75/370 (20%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G + +  V +   + QG  L+  +  +    +   +  +      +    +    L  +
Sbjct: 84  GGTVLEVLVRDTQAVKQGDVLVRIDPTDARLALAQAEAELARATRRVKGYVANDGGLKAQ 143

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               E                             +   R+    L     +    +DL+ 
Sbjct: 144 VTARE-----------------------------ADEKRAAAQLLAAEADMERATIDLQR 174

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +                  L +  +VS  +L Q +     +  +L   +  Q     +
Sbjct: 175 RQA------------------LAKSGSVSGEELTQAQNAFAAAKAQLASAVAAQAQASAN 216

Query: 244 INELYDEAN-----LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                         +E A+        L Q +R            +   ++ T+ +P+ G
Sbjct: 217 REAAIGAKQVNATLIEGADAQSNPEVQLAQARR---------DQAQVDLDRSTVRAPVDG 267

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +V  +S       Q   PLM +VP  +  Y+ A     Q+  V+ G    ++   Y   
Sbjct: 268 -VVAKRSVQIGQRVQAGAPLMTVVPV-QRIYVDANFKEGQLGKVRVGQRVQLQSDLYGSD 325

Query: 359 REKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
              K+   +              P  +   N ++  +   V +++     + N + +   
Sbjct: 326 V--KYSGTVVGFSGGSGSAFAAIPAQNATGNWIKVVQRLPVRIQLDAAELARNPLRVGLS 383

Query: 409 FPAEVLFTAK 418
               V   + 
Sbjct: 384 MQVTVDTRSG 393


>gi|167761795|ref|ZP_02433922.1| hypothetical protein BACSTE_00136 [Bacteroides stercoris ATCC
           43183]
 gi|167700301|gb|EDS16880.1| hypothetical protein BACSTE_00136 [Bacteroides stercoris ATCC
           43183]
          Length = 363

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 59/415 (14%), Positives = 122/415 (29%), Gaps = 92/415 (22%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF------SGIIK 68
             L+R  +   +    ++ W I+  +             ++    +         SG IK
Sbjct: 21  RKLRRWQIAVSLLGAAIVVWGIV-EVACLFLGYNRTETSNDAQIEQYISPINLRASGYIK 79

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K       ++ +G  LL  +D          K+ +      +    +    +       +
Sbjct: 80  KIYFTEHQEVHKGDTLLVLDD-------REYKIRVMEAEAALKDALAGATVIGATLQTTQ 132

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                                                +   S +
Sbjct: 133 TTASV-----------------------------------------------YDASISEI 145

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L+  +KD    +NL ++NA +   L Q E     +  +L     +QK  L  +N   
Sbjct: 146 EIRLAKLEKDRQRYQNLVQRNAATPIQLEQIETEYEATRKKLEATKRQQKAALSGVN--- 202

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                       E+S   E  +       + L +         +++P  G  +  ++   
Sbjct: 203 ------------EVSHRRESTEAAIQRATAALEMARLNLSYTVVVAPCDGK-LGRRALEE 249

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
             +    Q +  I+P ++   + A     Q++++  G   T+     +D   K+F   I 
Sbjct: 250 GQFITAGQTITYILPDTQKWIV-ANYKETQVENLHIGQEVTITVDAISD---KEFTGTIT 305

Query: 369 KID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            I           P  +   N ++ Q+   V +  T+L+  DN  +L  G    V
Sbjct: 306 AISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTNLSKEDNE-KLAAGMMVIV 359


>gi|299144690|ref|ZP_07037758.1| putative multidrug resistance protein [Bacteroides sp. 3_1_23]
 gi|298515181|gb|EFI39062.1| putative multidrug resistance protein [Bacteroides sp. 3_1_23]
          Length = 363

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 56/360 (15%), Positives = 115/360 (31%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I K       ++ +G  LL  +D          K+ +      +   ++    +N  
Sbjct: 75  SGYIDKIYFTEHQEVHKGDTLLILDD-------REYKIRVMEAEAALKDAQAGATVINAT 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +  +      +  + +                                           
Sbjct: 128 LNTTQTTASVYDASIAE------------------------------------------- 144

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               +   L+  +KD    +NL ++NA +   L Q       +  +L     ++K  L  
Sbjct: 145 ----IEVRLTKLEKDRKRYENLVKRNAATPIQLEQIVTDYDATRKKLEATKRQKKAALSG 200

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++E+            + ++ +    + T A EM++L           +++P  G  +  
Sbjct: 201 VDEV----------SYRRMNTEAAIQRATAALEMARLN-----LSYTVVIAPCDGK-LGR 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +S     +    Q +  I+P ++   + A     QI+++  G    V     +D   K+F
Sbjct: 245 RSLEEGQFISAGQTITYILPDTQKWIV-ANYKETQIENLHIGQEVFVTVDAISD---KEF 300

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           K  +  I           P  +   N ++ Q+   V +  TDL+  DN   L  G    V
Sbjct: 301 KGKVTSISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTDLSKEDNE-RLAAGMMVVV 359


>gi|83952113|ref|ZP_00960845.1| HlyD family secretion protein [Roseovarius nubinhibens ISM]
 gi|83837119|gb|EAP76416.1| HlyD family secretion protein [Roseovarius nubinhibens ISM]
          Length = 81

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 3/80 (3%)

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFTAKN 419
            +    +  I P     +  +  Q Y+ V +++T        + EL  G P E       
Sbjct: 2   PELSGQVADISPSSVMDE--VTGQHYFRVTVEVTAEELGRLGDRELVPGMPVEAYVQTGE 59

Query: 420 TTLAQEIIHPITDNWPKIFE 439
            T+   ++ P  +   + F 
Sbjct: 60  RTVLSYLVKPFEEQLMQAFR 79


>gi|315221838|ref|ZP_07863750.1| bacteriocin secretion accessory protein [Streptococcus anginosus
           F0211]
 gi|315189071|gb|EFU22774.1| bacteriocin secretion accessory protein [Streptococcus anginosus
           F0211]
          Length = 453

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 67/452 (14%), Positives = 155/452 (34%), Gaps = 36/452 (7%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSI---IGIIGLITWSILLPIEISVSSSGEILNEDNVV 57
           M+  ++K+ +  H       T+L +     I+ L+ +S +   E++V S GEI     + 
Sbjct: 1   MNPNLFKSAEFYHRRYHNFATVLILPLAFFILFLVLFSFVGQKEVTVKSIGEITPTKVIA 60

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFE---DIETTDLIDLKKVSIKNLRCHIDTEK 114
            I+S     +    +     + +G  L+ +    +      I+ +  + +  +  ++T K
Sbjct: 61  MIQSTSDNTVLTNHLAENKTVTKGELLVQYTKNMEASQQTAIETQLATYQRQKAELETLK 120

Query: 115 SALDFLNNKYDVLEK--------AFESREEQLLDFLGKYHSTCSK---VFNYGISSVYRS 163
           ++L    N +   ++         F  + E L   + K +S  SK   + N+ I+++   
Sbjct: 121 NSLQQGTNLFTNKDEFGYANTFNNFIKQSEDLTIGISKNNSEVSKQASLTNHTIAAIDDQ 180

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS------QNDLN 217
           +     +M   +     + + +S L    + HQ    + KN ++            + +N
Sbjct: 181 MNELTKQMNDYHELYHAISSNASNL-PQNNPHQATFNLYKNEYQVKPDPSTTNQYLSQIN 239

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                +  S   L            + N L  +  +    +++   + L        D  
Sbjct: 240 TNISNLKSSLANLNIQKAGTGTATTYDNSLSTKIEVLRTQFIQTADQQLTSLTTQITDLQ 299

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKV 334
           ++L       +   + +P  G +  + +    +   +   + +I P    +K   I   V
Sbjct: 300 NQLNQANAQLQNNQLTAPETGILHISSALKGKSLLPKGTEIAQIYPDITKTKEVLITYYV 359

Query: 335 TPKQIQHVKKGYTATVRFPHY-ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
               + ++KKG T+ +                II KI+ I +      Q   +    +  
Sbjct: 360 PSAYMTNLKKGQTSRLILEKIGNQTIT-----IIGKINSIDTSATETKQGNLF---KITA 411

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
                  ++  L+ G    V       +    
Sbjct: 412 KASVSKKDSQILKYGLQGRVTSVIAKKSFFHY 443


>gi|158339212|ref|YP_001520389.1| RND family efflux transporter MFP subunit [Acaryochloris marina
           MBIC11017]
 gi|158309453|gb|ABW31070.1| efflux transporter, RND family, MFP subunit [Acaryochloris marina
           MBIC11017]
          Length = 454

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 94/312 (30%), Gaps = 60/312 (19%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V  G ++ +G  ++  E     + ++    S+   R                 
Sbjct: 74  GRILEIFVRQGDRVRRGDKIVRLEPTRDRENVNAASQSVNVERA---------------- 117

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                           +      L+       +        +  
Sbjct: 118 -------------------------------RLGQAVAELRTAQANRAAAAAQVKSAKAD 146

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              + A +   Q +L   K L +   + Q +L+   R       +L+ NI ++ +    +
Sbjct: 147 LQTIEAEVELAQINLDRTKKLVKDGVLPQQNLDDSTR-------DLKTNIAQRNSRRESL 199

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N    E+       + +   +++  +   A   ++L  + +  E  TI +PI G I    
Sbjct: 200 NAAI-ESQQAADQQVDQAQANVDSQKAAIARSKAELRAVGQNLEFNTIRAPIDGVIGSFD 258

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           S    +Y    + L  +  +++   +   +  +    +K+G           +      +
Sbjct: 259 SKKVGDYVSVGEQLTTLT-NNQTLELNINIPIENRDQIKRGLAVE----TIGNNERHIVR 313

Query: 365 AIIEKIDPIISQ 376
             I  I P++ Q
Sbjct: 314 GQINYIAPLVQQ 325


>gi|119508878|ref|ZP_01628030.1| hypothetical protein N9414_20900 [Nodularia spumigena CCY9414]
 gi|119466407|gb|EAW47292.1| hypothetical protein N9414_20900 [Nodularia spumigena CCY9414]
          Length = 388

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/330 (13%), Positives = 102/330 (30%), Gaps = 42/330 (12%)

Query: 43  SVSSSGEILNEDNVV--EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +V + G+I  E  V+   + +     + +  V+ G  + +   +                
Sbjct: 42  AVVALGQIEPEGEVIRLSVPNAQDSRVNQILVKEGDFVQRNQIIAIL------------- 88

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                           +D L       E     ++ +LL           +     I++ 
Sbjct: 89  --------------QGIDQLEADLKDAETDVSLQQAELLKVQ------QGEAKKAEIAAQ 128

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             ++     ++++  + +   +   ++  A L   Q      + L  + A+S  D +  +
Sbjct: 129 TATINRLKAQLKAETIQK---QAARNIADATLEEAQLTYQRRQYLSTQGAISIADADTAK 185

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R +  +   L E   E    +  +     E         +    D+E            +
Sbjct: 186 RELATAEATLMERTAELDKTITTLQAQILEEEARLTQLTEIRPVDIEIANLRLQKAKIAV 245

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              +   E   + +P  G I+   +         S  +++I    ++  + A+V    I 
Sbjct: 246 IQRKARLENAKVRAPAFGQILRINTR-IGEQVNTSLGIVEIARTDRMFAV-AEVAETDID 303

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKI 370
            ++ G  AT+    Y        K  +E+I
Sbjct: 304 KIRLGQQATIS-SEYGGF-SGDIKGNVEQI 331


>gi|170734655|ref|YP_001773769.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
 gi|169820693|gb|ACA95274.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
          Length = 470

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/405 (10%), Positives = 120/405 (29%), Gaps = 78/405 (19%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  +  + ++ +IG + W          +       + N + +    SG +
Sbjct: 124 ERKRPGKKPLIILGAVVLVLLIGGLVW-WFATRNQESTDDAY--TDGNAIAVAPHVSGYV 180

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V++ + + +G  L+  +               ++ R  +D  ++ L     + D  
Sbjct: 181 TRLAVDDNTFVRRGDVLVEIDP--------------RDYRAQVDAAQAQLGLAQAQLDAA 226

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
               +                   +      + YR  + ++    + Y   L  +++   
Sbjct: 227 RVQLD-------------------IARVQYPAQYRQARAQIESAEAAYRQALAAQSRQRA 267

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           + A  +S Q                  D    +R    + + + +      +++      
Sbjct: 268 VDARATSQQ----------------AIDAADAQRATADANVAMAQAQARTASLVPQ---- 307

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                      +++    +E+ ++      ++L           + +P  G +       
Sbjct: 308 ----------QIRQAETAVEERRQQVLQARAQLETANLNLSYCEMRAPSDGWVTRRNV-Q 356

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             ++ Q    +  IV  +   ++ A     Q++ ++ G    V    Y D+        +
Sbjct: 357 LGSFLQPGTSIFSIV--TPRVWVTANFKESQLERMRIGDRVDVSVDAYPDL---DLHGHV 411

Query: 368 EKI-----DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           + I         +    N     + +++ ++      D  +  R 
Sbjct: 412 DSIQLGSGSRFSAFPTENATGN-FVKIVQRVPVKIVLDGPLPTRP 455


>gi|323518147|gb|ADX92528.1| multidrug resistance efflux pump [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 343

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 57/412 (13%), Positives = 123/412 (29%), Gaps = 88/412 (21%)

Query: 20  MTLLSIIGIIGLITWS---ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           + +++ I ++  I W    I LP  I  +    +  E +   I    SG I++  +++  
Sbjct: 9   VMVIAFIIVLVSILWILKVIFLPSSIVKTDDARVDVEYS--TIAPKVSGNIEEIYIKDHQ 66

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L                         ID                       + 
Sbjct: 67  TVKKGQLL-----------------------ARIDAR-------------------DYQA 84

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            L +    Y    + +    ++   +   ++            + E +   + A +   +
Sbjct: 85  ALAEAESNYAKAQADLNEAMLAVERQPTVIR------------ETEAQLRKVEAGIKLTK 132

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +    + L    A S+    Q +  + +   +L  +  +  +    +N+   +   + A
Sbjct: 133 DNTARYEQLQALGAESRLITQQSKTTLTEQYADLDSSKEKVIDAQYQLNQYKIQVQAKQA 192

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              +  +                    +       I +PI G I   +S +  N+     
Sbjct: 193 ALKQAQAAL---------------DKAKLNLSYTEIRAPIDGMI-GQKSANVGNFVGAGN 236

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK------- 369
           PLM +VP     Y+ A     +++ +K G   TV    Y      + K +++        
Sbjct: 237 PLMVVVPLD-QVYVEANFREIELKQIKIGQPVTVYVDAYN----VELKGVVDSFSPSTGA 291

Query: 370 -IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              PI +       T+    + L+I  L    +   LR G    V       
Sbjct: 292 FFSPISATNATGNFTKIVQRLPLRIKLLENQPDIKLLRPGLSVVVSVDTTKK 343


>gi|298387357|ref|ZP_06996910.1| ABC transport system [Bacteroides sp. 1_1_14]
 gi|298260026|gb|EFI02897.1| ABC transport system [Bacteroides sp. 1_1_14]
          Length = 304

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 55/289 (19%), Positives = 107/289 (37%), Gaps = 39/289 (13%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++      +  QL    G       +V       +Y         M+S+   R DL  + 
Sbjct: 39  IVSAEAAGKLLQLEVEEGTRLKAGEEVGLVDTVQLYLKKLQLEANMKSVESQRPDLAKQI 98

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  +  +++ Q++   ++NL    A +Q  L+  +  V       R+ I ++ ++++  N
Sbjct: 99  AATKQQITTAQREKKRVENLLAAGAANQKQLDDWDAQVTLLQ---RQLIAQESSLMKSTN 155

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L ++ N         +S  + Q               E    +  I SPI GT++  + 
Sbjct: 156 SLTEQGNS--------VSIQVAQV--------------EDQLNKCHIQSPIEGTVLA-KY 192

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
             +   A   +PL K V      Y+RA +T +Q+  VK G   TV +  Y +  +K +  
Sbjct: 193 AEAGELASVGKPLFK-VGEVDRMYLRAYITSEQLSQVKLGDKVTV-YSDYGNSEQKAYPG 250

Query: 366 IIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           ++  I              N +    Y V + +       N+  L+ G 
Sbjct: 251 VVTWISDRSEFTPKTILTKNERANLVYAVKIAV------KNDGSLKIGM 293



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 83/232 (35%), Gaps = 27/232 (11%)

Query: 26  IGIIGLITWSILLPIEISVS---SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           IGI G+  W +            ++G     +  V + +  +G + + +VE G+++  G 
Sbjct: 7   IGIYGMAVWMLSA-CGNGTPDYDATGTFEATE--VIVSAEAAGKLLQLEVEEGTRLKAGE 63

Query: 83  -------PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE---KAFE 132
                    L  + ++    +   +    +L   I   K  +     +   +E    A  
Sbjct: 64  EVGLVDTVQLYLKKLQLEANMKSVESQRPDLAKQIAATKQQITTAQREKKRVENLLAAGA 123

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS------- 185
           + ++QL D+  +      ++     SS+ +S      +  S+ +    +E++        
Sbjct: 124 ANQKQLDDWDAQVTLLQRQLI-AQESSLMKSTNSLTEQGNSVSIQVAQVEDQLNKCHIQS 182

Query: 186 ---SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                + A  +   +  ++ K LF+   V +  L         S ++L + +
Sbjct: 183 PIEGTVLAKYAEAGELASVGKPLFKVGEVDRMYLRAYITSEQLSQVKLGDKV 234


>gi|311278363|ref|YP_003940594.1| efflux pump membrane protein [Enterobacter cloacae SCF1]
 gi|308747558|gb|ADO47310.1| efflux pump membrane protein [Enterobacter cloacae SCF1]
          Length = 390

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 88/276 (31%), Gaps = 34/276 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                    L   + + R + +N   L+    + +  LS  Q DL     L   N + + 
Sbjct: 99  QAFEKAQTQLASSVRQTRQLMINSKQLQANIDVKKTALSQAQTDLNRRIPLGTANLIGRE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  EL   I +       +     E          E+            
Sbjct: 159 ELQHARDAVASAQAELDVAIQQYNANQAMVLATKLEEQPAVQQAATEVRNAWL------- 211

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   +S         + PLM +VP S   ++ A  
Sbjct: 212 -----------ALERTKIVSPMTGYVSR-RSVQPGAQISPTTPLMAVVPASD-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ H++ G  AT+    Y D    K+   +  +D          P  +   N ++  
Sbjct: 259 KETQLAHMRIGQPATITSDIYGDSV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 316

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +   V +++     +++ + +  G    V     N 
Sbjct: 317 QRLPVRIELDAKQLAEHPLRI--GLSTLVEVDTSNR 350



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 51/164 (31%), Gaps = 3/164 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L++ +  +     +  +  + +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDYVQKGDVLVSLDPTDAKQAFEKAQTQLASSVRQTR 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L     LG  +    +   +   +V  +      
Sbjct: 117 QLMINSKQLQANIDVKKTALSQAQTDLNRRIPLGTANLIGREELQHARDAVASAQAELDV 176

Query: 170 RMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            ++    N+   L  K     A+  +  +       L     VS
Sbjct: 177 AIQQYNANQAMVLATKLEEQPAVQQAATEVRNAWLALERTKIVS 220


>gi|271501800|ref|YP_003334826.1| efflux pump membrane protein [Dickeya dadantii Ech586]
 gi|270345355|gb|ACZ78120.1| efflux pump membrane protein [Dickeya dadantii Ech586]
          Length = 391

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 63/410 (15%), Positives = 128/410 (31%), Gaps = 104/410 (25%)

Query: 19  RMTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            M L   IG +    W ++L      + +  +        N V+I S  +G + +  V+N
Sbjct: 28  LMILFFFIGCVWFAYWYLVLRHHQETDDAYVA-------GNQVQIMSQVNGSVTRVNVDN 80

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L+  +  ++                                   E+AFE  
Sbjct: 81  TDFVKKGDVLIELDPTDS-----------------------------------EQAFERA 105

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +  L + + + H     V  Y  +   + +   L +  S    R  L   +++ R  L  
Sbjct: 106 QTTLANSVRQVHQQMINVRQYKANIELQQIT--LDQAISDLNRREALGRANAIGREDLQH 163

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            +  +   K   E    ++      + +V  + LE +  I +    LR+           
Sbjct: 164 ARDQVASAKASLE---ATKQQYAAAQALVLNTPLEQQPAIAQAATDLRN----------- 209

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                                            ++  I+SP+ G +   +S         
Sbjct: 210 ----------------------------AWLALKRTHIVSPVDGYVSR-RSVQLGARITP 240

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--- 371
           S  LM +VP     ++ A     Q+ +++ G  ATV    Y D     +K  +  +D   
Sbjct: 241 SSSLMAVVPA-APLWVDANFKETQLANMRIGQPATVTSDLYGDNV--VYKGKVVGLDMGT 297

Query: 372 -------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
                  P  +   N ++  +   V +++     +DN + +       V 
Sbjct: 298 GSAFSLLPAQNATGNWIKVVQRLPVRIELDPKQLADNPLRIGLSMLVNVD 347


>gi|220920449|ref|YP_002495750.1| membrane-fusion protein [Methylobacterium nodulans ORS 2060]
 gi|219945055|gb|ACL55447.1| membrane-fusion protein [Methylobacterium nodulans ORS 2060]
          Length = 422

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 109/366 (29%), Gaps = 58/366 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL-NEDNVVEIKSPFSG 65
            +L R    +   +  +  + +   +TWS++  I    +  G ++     VV+  S  +G
Sbjct: 24  DHLVRITKPADWILGAVIALLLTTALTWSVVGRIPTRAAGEGILVSVGGRVVDAVSATAG 83

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +   +V  G ++ QG  +      E                            +  +Y 
Sbjct: 84  RLATIEVAVGDRVAQGQTVARIAQTE----------------------------IEQRYR 115

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
              +    RE +      K  S  +          +  L+   T++      R+D     
Sbjct: 116 NAVEVHREREREHTTLKAKTESELAAKARN-----FAKLEEAFTQIVQATEQRIDY---- 166

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                       ++  ++ L  K   ++  +  + R +  +    R+   + +N +  + 
Sbjct: 167 ---------LAGEVKNLEMLLSKGITTRRIVEDRRRELTDA----RQRRQDAQNEVLKLR 213

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               +   +    +++    L + +R       +L           + SPI G ++  + 
Sbjct: 214 SQKADLETQRERDIQDSEFRLNEARRQMEQLAGELG------RNTQVTSPIEGRVLEIKV 267

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            S  +      P++ +    K       +   + + VK G    +               
Sbjct: 268 -SPGSVLSVGTPVIAVETEGKALEAVIYIPADKGKAVKPGMETRLEPSTVKREEFGTLVG 326

Query: 366 IIEKID 371
            +  I 
Sbjct: 327 TVVSIS 332


>gi|262382093|ref|ZP_06075231.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262297270|gb|EEY85200.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 356

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 52/359 (14%), Positives = 105/359 (29%), Gaps = 85/359 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+ + +    + QG  LL  +D E    +              + E + +D     
Sbjct: 67  SGYIKEVRFKEHQYVHQGDTLLILDDREYRIKVK-------------EAEAALIDA---- 109

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                                  S  +  + + + + N    + 
Sbjct: 110 -------------------------------------QGSQDVLRSGIETSHTNIAVQDA 132

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +  +A L   ++D      L ++ +V +    Q +     +    +  + ++K     
Sbjct: 133 NIAEAKAKLWQLEQDYHRFGRLLKEESVPEQQYEQSKAAFEAAQARYQALVEQKKAAFSQ 192

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E   +     A  L++                + L +         I +P  G +   
Sbjct: 193 FTETSKKTTGAEAAILRK---------------EADLDLARLNLSYTVITAPYDGHV-GR 236

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     Y Q  Q +  +V   K  +I A     QI H+  G    ++         K F
Sbjct: 237 RTLEPGQYVQAGQTISYLV-RDKDKWITANYKETQIPHIYIGQKVRIKVDALP---GKIF 292

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +  I           P  +   N ++ Q+   V + + +L+  D    LR G   E
Sbjct: 293 NGEVTAISDATGSKYSLVPTDNSAGNFVKVQQRIPVRIDLENLSQEDTQY-LRAGMMVE 350


>gi|330818238|ref|YP_004361943.1| Multidrug resistance efflux pump [Burkholderia gladioli BSR3]
 gi|327370631|gb|AEA61987.1| Multidrug resistance efflux pump [Burkholderia gladioli BSR3]
          Length = 371

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/353 (10%), Positives = 90/353 (25%), Gaps = 82/353 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V +   +  G PL+  +  +    +     S+   R  I   ++        
Sbjct: 76  SGYVTDVYVRDNQSVKAGDPLVKLDVRQYQVSLQNSLASVDARRADIARTQA-------- 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                            I+  + +L+    + +   +N      
Sbjct: 128 --------------------------------DIAQQHANLEQAQAQAQVSSIN------ 149

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                   L    ++      L    A +   +   +    ++   L  N          
Sbjct: 150 --------LKHASEEYARYAPLAATGAETHERIADLKNTRDQAQATLAANNASIAAARAQ 201

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           IN    +     A      +                    +   +   + S + G +  +
Sbjct: 202 INSSTAQLQQAQAQLEAAQASA---------------AQSQLDLDNTVVRSTLDGRV-GD 245

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     Y Q    L+ +VP   +  + A     Q+  ++ G   T+      D      
Sbjct: 246 RTVRVGQYVQPGTRLLTVVPVQDIYLV-ANFKETQVGRMRVGQPVTLHVDALPDRT---L 301

Query: 364 KAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNG 408
              ++   P    Q      +  T  + +++    ++I      +    L  G
Sbjct: 302 HGTVDSFSPGTGSQFALLPPDNATGNFTKIVQRVPVRIHVDTDDETRRVLLPG 354


>gi|325122325|gb|ADY81848.1| multidrug resistance protein A [Acinetobacter calcoaceticus PHEA-2]
          Length = 361

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 55/409 (13%), Positives = 117/409 (28%), Gaps = 88/409 (21%)

Query: 20  MTLLSIIGIIGLITW---SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +  ++ I ++  I W    I LP  +  +    +  E +   I    SG I++  +++  
Sbjct: 28  VMAIAFIIVLASILWVLKLIFLPSSVVETDDARVDVEYS--TIAPKVSGNIEEIYIKDHQ 85

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L            D +           +  K+  D       V  +    R  
Sbjct: 86  TVKKGQLLARI---------DARDYQAALAEAESNYAKAQADLSEAMLAVDRQPTVIR-- 134

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                                                      + E +   + A +   +
Sbjct: 135 -------------------------------------------ETEAQLRKVEAGIKLTK 151

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +    + L    A S+    Q +  + +   +L  +  +  N    +N+   +   + A
Sbjct: 152 DNTARYEQLQALGAESRLITQQSKTTLTEQYADLDSSKEKVINAQYQLNQYKIQVQAKQA 211

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              +  +                    +       + +PI G I   +S +  N+     
Sbjct: 212 ALKQAQAAL---------------DKAKLNLSYTEVRAPIDGMI-GQKSANVGNFVSAGN 255

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK------- 369
           PLM +VP     Y+ A     +++ +K G    V    Y      + K +++        
Sbjct: 256 PLMVVVPLD-QVYVEANFREIELKKIKIGQPVNVYVDAYN----VELKGVVDSFSPSTGA 310

Query: 370 -IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
              PI +       T+    + L+I  +    +   LR G    V    
Sbjct: 311 FFSPISATNATGNFTKIVQRLPLRIKLIENQKDVKLLRPGLSVLVSIDT 359


>gi|260568547|ref|ZP_05839016.1| multidrug resistance protein A [Brucella suis bv. 4 str. 40]
 gi|260155212|gb|EEW90293.1| multidrug resistance protein A [Brucella suis bv. 4 str. 40]
          Length = 317

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 90/289 (31%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 41  IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 100

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++   L     +  +   +I+ L          
Sbjct: 101 TMARVQKLHETRFVAQSELDNAQSALDQARARLAGADAQIASAKANISVL---------- 150

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                     +   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 151 -----EAQYNEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 204

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P     
Sbjct: 205 IAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAV 260

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++IT    +  + ++R G    V    +
Sbjct: 261 FSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDTR 309



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 65/257 (25%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +   +  +    +D     +       +
Sbjct: 9   VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 68

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 69  RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSALDQ 128

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+          +   S+L A  +        ++ L    A                
Sbjct: 129 ARARLAGADAQIASAKANISVLEAQYNEAASSTKSLE-LARDKAARDLSFTSLRAPFDGV 187

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +     + I  L     L      KE      +   T    +  +   +  
Sbjct: 188 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETQLAHIKVGETAHIYVDAIDGTKFD 247

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 248 GKVASI-APASGAVFSL 263


>gi|329295869|ref|ZP_08253205.1| Multidrug resistance protein A [Plautia stali symbiont]
          Length = 375

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/365 (11%), Positives = 108/365 (29%), Gaps = 74/365 (20%)

Query: 7   KNLKRNHPASLKRMTLLSII-GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
              KR     L  + ++ +I  ++G   W     IE +  +      E + V I    SG
Sbjct: 28  SPRKRPGKKPLIILAIVVVIMLLVGFWFWFSTRNIETTDDA----FTEGDAVTIAPKASG 83

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + +  V++  ++ +G  L+  +  +     D         +  +   ++ L     +  
Sbjct: 84  YVVQLLVKDNQRVKKGDLLVLIDPRDNAAQRD-------QAKAQLGLAQAQLHQAQAQLA 136

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +    + ++ +Q L    +                                       ++
Sbjct: 137 LARVQYPAQRDQALADQAR--------------------------------------AQA 158

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +LL A      +     +                +R +  +  +LR    + ++    + 
Sbjct: 159 NLLNAQADYRHQRGVDPRA-------------TSQRNIDTAAAQLRSAEAQLQSAKAQV- 204

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               E   +    +++   ++E  Q+      S+L   E       + +P  G +     
Sbjct: 205 ----EVASQVQLQIRQQETNVEARQQQVEQARSQLNTAELNLSYTEVRAPYDGFVTKRNV 260

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                  Q    L  +V      +I A     Q+  +  G    +    + D++    + 
Sbjct: 261 -QPGTLVQAGSALFSLVSPD--IWITANFKESQLARMNPGDKVEIGVDAWPDMK---LEG 314

Query: 366 IIEKI 370
            ++ +
Sbjct: 315 HVDSV 319


>gi|116253421|ref|YP_769259.1| hypothetical protein RL3680 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258069|emb|CAK09169.1| putative HlyD family secretion protein [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 337

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/359 (11%), Positives = 94/359 (26%), Gaps = 88/359 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +   + G  +  GT L   +       +   +  +  L+  +D  K+        
Sbjct: 56  SGRLAELHADEGDVVKTGTVLAKLDAAPYEFAVRSGEADVAALQATLDKLKAG------- 108

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                     R  ++      Y  + + + N  ++                         
Sbjct: 109 ---------PRPTEIAQARAAYDESIADLRNANLA------------------------- 134

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                              + L  +  +S+  L+Q       +           K +L  
Sbjct: 135 ---------------YDRARQLRPQGTISEASLDQATAARAMAAARSDSANEALKLLLEG 179

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                                D+           + L     + +   + +P  G I+  
Sbjct: 180 SR-----------------VEDIAVAAAQLKAAQATLASARTSLDDTELRAPNDGVILS- 221

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +   +      +  +  ++  ++  ++R  V    +  +  G    V         +K  
Sbjct: 222 RVRENGAIVSPADTVF-VLSLTEPVWVRTYVAEPDLGRIHPGMKVAV---TSDTAPDKPC 277

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +  I  I P+      S +   L+T   Y + + I          +LR G P  V F  
Sbjct: 278 EGTIGFISPVAEFTPKSVETPELRTDLVYRLRVVIDKPGP-----DLRQGMPVTVRFPT 331


>gi|259908842|ref|YP_002649198.1| HlyD family secretion protein [Erwinia pyrifoliae Ep1/96]
 gi|224964464|emb|CAX55973.1| HlyD family secretion protein [Erwinia pyrifoliae Ep1/96]
          Length = 362

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 86/289 (29%), Gaps = 15/289 (5%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           ++LDF   +        +  I    + +     ++        + + +     A++  ++
Sbjct: 76  EVLDFQPVHRGDLLMTIDDRI--YRQRVHQSAAQLNMKKAALANNQQQRRSAEAVIKRNE 133

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             L   K    K  +    +         S  E   +      ML  + +      +   
Sbjct: 134 AALHNAKAQALKGGLDLKRVENLAADGSLSVRERDASRASNSQMLAGVQQAQATLEVSRQ 193

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           +    I  +    +   A+  + L + +   +   I +P  G +          Y     
Sbjct: 194 DLQTTIV-NRASLEADVANAQAALELAQIDLDNTRISAPRDGQLGQIAVR-QGAYVTAGS 251

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  +VP     ++ A +   Q+  ++ G   +           + F   +E I P    
Sbjct: 252 RLTSLVPQ--QMWVIANMKETQMARIRPGLPVSFTVDALD---GEGFNGEVEYISPAAGS 306

Query: 377 Q----DNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +      +  T  + ++   + +      DN   LR G   EV     +
Sbjct: 307 EFSAISPDNATGNFVKIAQRIPVRIKITGDNAARLRPGMSVEVTINTAD 355



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 19/171 (11%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIK 104
               V  I    SG I   +V +   + +G  L+T +D        ++   +++KK ++ 
Sbjct: 57  VRGQVTFISPQVSGYITAVEVLDFQPVHRGDLLMTIDDRIYRQRVHQSAAQLNMKKAALA 116

Query: 105 N-----LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN----- 154
           N            +++     N K   L+   + +  + L   G                
Sbjct: 117 NNQQQRRSAEAVIKRNEAALHNAKAQALKGGLDLKRVENLAADGSLSVRERDASRASNSQ 176

Query: 155 --YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              G+     +L++    +++  +NR  LE   +  +A L   Q DL   +
Sbjct: 177 MLAGVQQAQATLEVSRQDLQTTIVNRASLEADVANAQAALELAQIDLDNTR 227


>gi|160887732|ref|ZP_02068735.1| hypothetical protein BACUNI_00133 [Bacteroides uniformis ATCC 8492]
 gi|317478667|ref|ZP_07937822.1| HlyD family secretion protein [Bacteroides sp. 4_1_36]
 gi|156862763|gb|EDO56194.1| hypothetical protein BACUNI_00133 [Bacteroides uniformis ATCC 8492]
 gi|316905178|gb|EFV26977.1| HlyD family secretion protein [Bacteroides sp. 4_1_36]
          Length = 364

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 57/360 (15%), Positives = 110/360 (30%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IKK       ++ +G  LL  +D          K+ +      +   ++    +   
Sbjct: 75  SGYIKKICFTEHQEVHKGDTLLILDD-------REYKIRVMEAEAALKDAQAGATVIGAT 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +      +  + +                                           
Sbjct: 128 LQTTQTTASVYDASIAE------------------------------------------- 144

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               +   L+  +KD    +NL ++NA +   L Q E     +  +L     +QK  L  
Sbjct: 145 ----IEIRLTKLEKDRQRYQNLVKRNAATPIQLEQIETEYAATHKKLEAVKRQQKAALSG 200

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +N               E+S   E  +       + L +         +++P  G  +  
Sbjct: 201 VN---------------EVSHRRENTEAAIQRATAALEMARLNLSYTVVVAPCDGK-LGR 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     +    Q +  I+P ++   I A     QI+++  G    +     +D   K+F
Sbjct: 245 RTLEEGQFITAGQTITYILPDTQKWII-ANYKETQIENLHLGQEVVITVDAISD---KEF 300

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           K  I  I           P  +   N ++ Q+   V +  TDL+  DN+  L  G    V
Sbjct: 301 KGKITAISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTDLSKEDNS-SLAAGMMVIV 359


>gi|327393439|dbj|BAK10861.1| multidrug resistance protein A EmrA [Pantoea ananatis AJ13355]
          Length = 366

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 103/312 (33%), Gaps = 24/312 (7%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +  + F++ + +      +  + Q +       +   +++   +      L MK   + +
Sbjct: 59  RGQVTFISPQVNGYLTQVDVVDLQPVKKGQLLMTIDDRIYRQRVHQAQAQLAMKQAALNN 118

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               RL  +      +A L + +          +       DL + E +    +L +RE 
Sbjct: 119 NQQQRLSAQATIQSNKAALENAKAQA------VKSGL----DLKRVENLAADGSLSMRER 168

Query: 234 IHEQKNMLRHINEL-YDEANLEFANY-LKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +    + + +L   EA +  A   L+ +  +    +   A   + L + E       
Sbjct: 169 DAARAANAQGLAQLHQAEAQVAVAQQNLQTVIVNRASLEGDVASAKAALELAEIDLANTR 228

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP  G +          Y      L  +VP+ K     A     Q+ H++ G   T+R
Sbjct: 229 ITSPDEGQLGQLSVR-KGAYVTAGTRLTSVVPNHKWII--ANYKETQLAHIRPGLPVTIR 285

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEV--ILKITDLAFSDNNIEL 405
                    K F+  +E + P    +      +  T  + ++   + +      +   +L
Sbjct: 286 VDALD---GKTFQGRVEYLSPAAGSEFSAISPDNATGNFVKIAQRIPVRIDVAPEVQQQL 342

Query: 406 RNGFPAEVLFTA 417
           R G   EV    
Sbjct: 343 RPGMSVEVSIDT 354



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 72/216 (33%), Gaps = 20/216 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +  +R   +      ++    ++ L  W +  P   SV S+        V  I    +G 
Sbjct: 14  RANRRRILSIALGSGIVVTGVLVILYAWQLW-PFTSSVQSTENAYVRGQVTFISPQVNGY 72

Query: 67  IKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSI-----KNLRCHIDTEK 114
           + +  V +   + +G  L+T +D        +    + +K+ ++     + L      + 
Sbjct: 73  LTQVDVVDLQPVKKGQLLMTIDDRIYRQRVHQAQAQLAMKQAALNNNQQQRLSAQATIQS 132

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR---- 170
           +     N K   ++   + +  + L   G              +     L     +    
Sbjct: 133 NKAALENAKAQAVKSGLDLKRVENLAADGSLSMRERDAARAANAQGLAQLHQAEAQVAVA 192

Query: 171 ---MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              ++++ +NR  LE   +  +A L   + DL   +
Sbjct: 193 QQNLQTVIVNRASLEGDVASAKAALELAEIDLANTR 228


>gi|268592352|ref|ZP_06126573.1| multidrug resistance protein A [Providencia rettgeri DSM 1131]
 gi|291312137|gb|EFE52590.1| multidrug resistance protein A [Providencia rettgeri DSM 1131]
          Length = 390

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 49/425 (11%), Positives = 116/425 (27%), Gaps = 96/425 (22%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H+    N KR     +    ++ ++ +     W ++L  +       +       + I +
Sbjct: 10  HNQKTTNEKRRTIWMVIATIIIILLFVAYGAYWFLVLRFQEYTD---DAYVSGLQIPIVA 66

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             +G + +   EN   +  G  L+  +                     +  E++  D   
Sbjct: 67  QTTGNVTQVNFENTDLVKAGDVLVVLDKTN----------------ARLAFEQAKHD--- 107

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                                                     L   + + + +Y+N  + 
Sbjct: 108 ------------------------------------------LATTVRKTKELYINGDEY 125

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +    R  L+  QKD      L     +S+ DL   +  V  +   L  +I +     
Sbjct: 126 QAQIQKNRVTLAQAQKDYQRRVALGRSGTISKEDLQHSQEAVQLAQAALDISIQQYNANR 185

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             +     +           +                         ++  I SP+ G + 
Sbjct: 186 ALLRNTELKKQPAIQQAADSVRSAWI------------------NLQRTEIKSPMTGYVS 227

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                   +       LM IVP  +  ++ A     Q++ V+ G   T+    Y D    
Sbjct: 228 RRNV-QVGSQVSPQSSLMAIVPV-QPVWVDANFKETQLEKVRIGQPVTINSDFYGDDI-- 283

Query: 362 KFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
            +   +  +D          P  +   N ++  +   V +++     + + + +      
Sbjct: 284 VYNGTVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRVELDPEQVAKHPLRIGLSMNV 343

Query: 412 EVLFT 416
            +   
Sbjct: 344 TIDIK 348


>gi|92112685|ref|YP_572613.1| secretion protein HlyD [Chromohalobacter salexigens DSM 3043]
 gi|91795775|gb|ABE57914.1| secretion protein HlyD [Chromohalobacter salexigens DSM 3043]
          Length = 350

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/263 (12%), Positives = 86/263 (32%), Gaps = 20/263 (7%)

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ +     +  V +    +  + L+        +        ++    +      ++
Sbjct: 48  AVRAEVTGRVAEVAVADNQRVAAGDILVKLDPSDAKSQLAQAQASLAVAQANAVSAARQV 107

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                   + + + +  +A +   +  L   + L EKN  SQ +    +  +  +   L 
Sbjct: 108 EQQQAAIEEAQARVTSAQADVEQARLHLERSQRLAEKNYASQQEYQDDQAALQVAEATLA 167

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                  +  + ++ L               + + +  +       + L       ++  
Sbjct: 168 ARRATLASSRKQLDVL---------------NAERDSAEANIEAARADLDNARHQLDKTR 212

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P+AG I  N++      AQ S  LM +VP      + A     Q   ++ G   ++ 
Sbjct: 213 LRAPVAGVI-GNKTVEVGTLAQPSLTLMHLVPIRSAYVV-ANYKETQTARMRSGQPVSLH 270

Query: 352 FPHYADIREKKFKAIIEKIDPII 374
              Y DI    F+ +++ + P  
Sbjct: 271 VDAYPDI---AFEGVVDSLAPAT 290


>gi|167647149|ref|YP_001684812.1| secretion protein HlyD family protein [Caulobacter sp. K31]
 gi|167349579|gb|ABZ72314.1| secretion protein HlyD family protein [Caulobacter sp. K31]
          Length = 375

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 58/430 (13%), Positives = 126/430 (29%), Gaps = 72/430 (16%)

Query: 1   MHHFMWKNLKRNHPASLKRMTL--LSIIGIIGLITWSILLPIEISVSSSGEILNED---- 54
           M            P   +R  L  L+++ +IGL+ W++          S ++  ++    
Sbjct: 1   MSDTASSAQAPGKPNGNRRQLLTGLAVVVVIGLVLWALYA----FFVGSRQVETDNAYVG 56

Query: 55  -NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             V ++    SG + K  V     +  G PL+  +D +    +   + ++   +  +   
Sbjct: 57  AEVAQVTPLISGPVAKVLVSETQVVAAGQPLVVIDDADAKIAVLSAQAALGQAQRKVQGY 116

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            ++   L  +                                G++    SL+        
Sbjct: 117 FASDTALGGQV-------------------AARDADIARAQAGVTGAQASLEQ------- 150

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                                 + +L+  K L +  AVS  +L   +     +    +  
Sbjct: 151 ---------------------ARIELSRRKALSDSGAVSGEELTTAQSQFTNA----QSA 185

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           + E +  L         A       +  IS          A   ++L   +   ++  + 
Sbjct: 186 LLEARAALAQAKANRAAAEGSRDVNVALISGLPASKNPEIAAAEARLASAQLALDRTVLR 245

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P+AG +            Q   PLM IVP +   ++ A     Q+  V+ G    +   
Sbjct: 246 APLAGVVSKKNV-QVGQQVQIGAPLMAIVPTTDA-FVDANFKEVQLDKVRIGQPVILTSD 303

Query: 354 HYA-----DIREKKFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIEL 405
            Y        R K           +I  Q+ +    +  +   V + +       + + +
Sbjct: 304 LYGGGVKFHGRVKGLSGGTGSAFSLIPAQNASGNWIKVVQRLPVRIALDPAELKAHPLRV 363

Query: 406 RNGFPAEVLF 415
                A +  
Sbjct: 364 GLSMKAAIDI 373


>gi|313205175|ref|YP_004043832.1| ABC transport system, lipoprotein [Paludibacter propionicigenes
           WB4]
 gi|312444491|gb|ADQ80847.1| putative ABC transport system, lipoprotein [Paludibacter
           propionicigenes WB4]
          Length = 307

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 94/261 (36%), Gaps = 39/261 (14%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           + +Y   +  ++  +++   R D++ + + +   +++ + +    +NL + NA +Q  L+
Sbjct: 79  TQLYLRKQQIISSKKALLSRRPDIKKQIAAIEQQIATAKTEHKRFENLVKANAANQKQLD 138

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                +     +L           + IN+  +  +L+ +                     
Sbjct: 139 DINAQIALLEKQLDAQKTTLVTGNQGINDDSEGISLQVSQ-------------------- 178

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
                L+   ++  I SPI GT++  +       A   + L KI   +    +RA VT  
Sbjct: 179 -----LDDQLKKCNITSPIDGTVL-VKYAEMGEVAAPGKALFKIA-DTNNMILRAYVTAD 231

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILK 392
           Q+  +K G    V    +     K++   +  I         + Q  + +    Y V + 
Sbjct: 232 QLTKLKIGQQVKVM-TDFGKDDTKEYTGTLAWISSKSEFTPKTIQTRDERANLVYAVKIN 290

Query: 393 ITDLAFSDNNIELRNGFPAEV 413
           +       NN  L+ G   EV
Sbjct: 291 V------KNNGLLKIGMYGEV 305


>gi|312113959|ref|YP_004011555.1| secretion protein HlyD [Rhodomicrobium vannielii ATCC 17100]
 gi|311219088|gb|ADP70456.1| secretion protein HlyD family protein [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 336

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 93/287 (32%), Gaps = 20/287 (6%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R E L    G    T   + +        SL     +      N   L+    +    ++
Sbjct: 51  RIETLAVDEGDRVHTGQTLASLEKIYFRESLAQMRAQADQAAANYAKLKAGYRV--EEIA 108

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +  +   +       +++       +    S     +    ++     +N   +   L
Sbjct: 109 QARAAVAEREATLANATITRKRAESLLKTPAGSQKVFDDTQAAERQAEALLNSAREALRL 168

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + A Y KE   D+   +    +  +    +E+      +++P  GT++  +        Q
Sbjct: 169 QEAGYRKE---DIAYAKAQLDERKAVTATIERQLADADLIAPGDGTVLS-RVREVGAIVQ 224

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             + +  +V  +   ++R  VT   +  ++ G   TV          K ++  +  I   
Sbjct: 225 PGETVF-VVSLTSPVWVRTYVTEPDLGRIRPGMPVTVH---TDTPGGKVYRGKVGFISTA 280

Query: 374 I-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                 + Q + L+T   Y + + +       N+ ELR G P  V  
Sbjct: 281 AEFTPKTVQTDELRTSLVYRLRVVVD-----GNDEELRQGMPVTVEL 322



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 72/217 (33%), Gaps = 18/217 (8%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS----GIIKKFQVEN 74
            +  L+I+   G   W  +        ++GE+    NV   +        G I+   V+ 
Sbjct: 5   LLIALAIVAAGGGYWWYRVSH-----ETTGELRLHGNVEVRQVNLGFKVAGRIETLAVDE 59

Query: 75  GSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           G ++  G  L + E I       +     D    +   L+     E+ A           
Sbjct: 60  GDRVHTGQTLASLEKIYFRESLAQMRAQADQAAANYAKLKAGYRVEEIAQARAAVAEREA 119

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL--ENKS 185
             A  +   +  + L K  +   KVF+   ++  ++  +  +   ++ L       E+ +
Sbjct: 120 TLANATITRKRAESLLKTPAGSQKVFDDTQAAERQAEALLNSAREALRLQEAGYRKEDIA 179

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
                L        T+ + L + + ++  D     R+
Sbjct: 180 YAKAQLDERKAVTATIERQLADADLIAPGDGTVLSRV 216


>gi|157803461|ref|YP_001492010.1| multidrug resistance protein A [Rickettsia canadensis str. McKiel]
 gi|157784724|gb|ABV73225.1| Multidrug resistance protein A [Rickettsia canadensis str. McKiel]
          Length = 350

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 62/420 (14%), Positives = 132/420 (31%), Gaps = 90/420 (21%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           K  H    K + +++++  I        W+     + +         + ++  + +  SG
Sbjct: 11  KYTHHPFTKYVIIIALVIFIYFGYRIYVWANTQSTDNAYI-------DADISNVSAEVSG 63

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++ K  V N +++ +G  +   +D +           +  L   I+  K  ++ +  K  
Sbjct: 64  VLIKLFVTNNTKVNKGDLIGEIDDRDYKA-------KLAALEASIEACKKNIEIIEQKTS 116

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +   + E   E+L     K       +     + V    K KL   +++   R + +   
Sbjct: 117 IGRISLEQAAEKL-----KLTKISFDIATTDFTRVQELNKAKLASSKTLDDARNNYQKAK 171

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  +      Q DL + K            L   E+                        
Sbjct: 172 TAYKQ----AQLDLDISKQNVA--------LLDLEKSAA--------------------- 198

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                         KE  ++L +N++          +  ++ +   +++ ++G I  N S
Sbjct: 199 --------------KEKFKELTENKK----------VTLRSLQSTKLIAMVSG-IFGNSS 233

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +  NY    + L  IV      YI+A     QI+  K G    + F        K    
Sbjct: 234 LAIGNYILPGRVLFSIV-QDNTMYIQANFKETQIKKFKSGMKVKIEFDALPK---KVIYG 289

Query: 366 IIEKIDPIISQQ----DNNLQTQEYYEVILKITD-LAFSDNNIELRNGFPAEVLFTAKNT 420
            I  I P    +      +     + +++ ++   + F   N  L  G  A V       
Sbjct: 290 KIRNIAPATGSKFSLIPPDNAAGNFTKIVQRVPVLIDFESPNANLVPGMSAIVSIRTDQK 349


>gi|75910303|ref|YP_324599.1| heterocyst specific ABC-transporter, membrane fusion protein DevB
           [Anabaena variabilis ATCC 29413]
 gi|75704028|gb|ABA23704.1| heterocyst specific ABC-transporter, membrane fusion protein DevB
           [Anabaena variabilis ATCC 29413]
          Length = 408

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/316 (11%), Positives = 105/316 (33%), Gaps = 55/316 (17%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           +  +  + +  V+ G  + +G  +   +++ +    +   ++ ++  +  +   ++    
Sbjct: 87  ALQTARLDQVLVKEGDNVRRGQLIAVLDNVSQLQTTLAKAQMGVRVAQSQLSQAQAG--- 143

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                                                      + + ++  +++ +   +
Sbjct: 144 -----------------------------------TTKQGEIAAQQARIASLQAQFQGDI 168

Query: 180 DL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           ++ ++K + L A L + + +    ++L+E+ A+S    + +   V     +L+E      
Sbjct: 169 NIHKSKIAGLEAQLRNAETEYGRFRSLYEQGAISAVTKDTKLLAVETLQAQLKEAQSSLN 228

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             L    +   EA    A   +    D++  Q       + +   +       + SP+  
Sbjct: 229 QTLSSFPKQIQEAKASLAELKEVRPVDVQVAQSELERAKAAVLEAKANLALAYVRSPMNA 288

Query: 299 TIVYNQSFSSSNYAQQSQPLMK--IVP--HSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
            I+   +F         + + +  IV    ++  Y+ A++    +  +K G  A +    
Sbjct: 289 KILKVNTF-------PGETISEKGIVELAQTQQMYVVAEIYETDVSKIKIGQKAEISSKA 341

Query: 355 YADIREKKFKAIIEKI 370
                 K     +EKI
Sbjct: 342 LP----KGMIGTVEKI 353


>gi|30249603|ref|NP_841673.1| HlyD family secretion protein [Nitrosomonas europaea ATCC 19718]
 gi|30138966|emb|CAD85550.1| HlyD family secretion protein [Nitrosomonas europaea ATCC 19718]
          Length = 497

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 63/204 (30%), Gaps = 19/204 (9%)

Query: 217 NQQERIVYKSTLELRENIHEQKNML--RHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
              + ++ +    L + I++++  L    I    D            I+  L   +    
Sbjct: 233 LHSQYLLARRRQTLAQTIYDREEQLWREKITARQDYLTARQQREEASITTQLAAERLLAL 292

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
               K  +  K   +  I SPI+G ++     +     ++ +    I+      +   +V
Sbjct: 293 GVQPKSDLSGKNLARYEIRSPISGIVIDEAIVT-GEVVKEDKT-AFIIADISTIWAAVRV 350

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
            P  +  V  G  A +R   Y   R    +  +  +  ++ +Q               + 
Sbjct: 351 FPGNLHQVHVGQRAVIRANAYDLTR----EGEVTYVTTLLDEQTRTA-----------VA 395

Query: 395 DLAFSDNNIELRNGFPAEVLFTAK 418
            +   + +   R G   +     +
Sbjct: 396 RVQLDNQDERWRPGMFVKADLQTE 419


>gi|77459670|ref|YP_349177.1| secretion protein HlyD [Pseudomonas fluorescens Pf0-1]
 gi|77383673|gb|ABA75186.1| putative HlyD-family secretion protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 380

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 47/344 (13%), Positives = 97/344 (28%), Gaps = 30/344 (8%)

Query: 83  PLLTFEDIETTDLIDLKKVSIKNL-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            L+     +        + +   L R  +      L     +  V +  F    + L+  
Sbjct: 50  VLIVLYAWQLPPFSSAVETTENALVRGQVTIIGPQLSGYVFEVPVQDFQFVKEGDLLVRL 109

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             + +          ++    SL   + +  S        +   +   A L   + DL  
Sbjct: 110 DDRIYQQRLDQSLAQLAVQKASLANVVQQRNSAEATIKLRQAVVADSEAQLRKSEADLRR 169

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            K L    +VS+       R +  +     ++I        ++     +      N    
Sbjct: 170 NKALVNDGSVSK-------REMDVALAANAQSIAAVAQAKANLEIARQDLQTVIVNRGS- 221

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
                   +   A   + + +         I++P  G +          Y      LM +
Sbjct: 222 -------LEAAVASAEAAVQLARIDLSNTRIIAPRDGQLGQIGVR-LGAYVNSGAQLMAL 273

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ---- 377
           VP+ K     A +   Q+ +V+ G  A+         +   F   ++ I P    +    
Sbjct: 274 VPNQKWVI--ANLKETQMDNVRVGQPASFTVDALNHRK---FTGHVQHISPGTGSEFALL 328

Query: 378 DNNLQTQEYY----EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
             +  T  +      V ++IT       +  LR G    V    
Sbjct: 329 QADNATGNFVKIAQRVPVRITIDPDQQESERLRPGMSVVVSIDT 372



 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 80/228 (35%), Gaps = 4/228 (1%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           ++L+    +SL    +  +  +I L  W  L P   +V ++   L    V  I    SG 
Sbjct: 30  RSLRVRIISSLGFAGVAIVGVLIVLYAWQ-LPPFSSAVETTENALVRGQVTIIGPQLSGY 88

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V++   + +G  L+  +D      +D     +   +  +       +       +
Sbjct: 89  VFEVPVQDFQFVKEGDLLVRLDDRIYQQRLDQSLAQLAVQKASLANVVQQRNSAEATIKL 148

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY--RSLKMKLTRMRSIYLNRLDLENK 184
            +      E QL           + V +  +S      +L      + ++   + +LE  
Sbjct: 149 RQAVVADSEAQLRKSEADLRRNKALVNDGSVSKREMDVALAANAQSIAAVAQAKANLEIA 208

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              L+ ++ +       + +      +++ DL+   RI+     +L +
Sbjct: 209 RQDLQTVIVNRGSLEAAVASAEAAVQLARIDLSNT-RIIAPRDGQLGQ 255


>gi|154499880|ref|ZP_02037918.1| hypothetical protein BACCAP_03537 [Bacteroides capillosus ATCC
           29799]
 gi|150271478|gb|EDM98735.1| hypothetical protein BACCAP_03537 [Bacteroides capillosus ATCC
           29799]
          Length = 550

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 54/398 (13%), Positives = 121/398 (30%), Gaps = 66/398 (16%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN---- 122
           I +  V  G  +  G  L   +D +  + I+  +  I  L   +D     L  L      
Sbjct: 96  ILEVYVSAGDTVEAGDLLYVQDDAQLDEEIETYQDEIAELEEELDGYYDQLSDLQESLSA 155

Query: 123 ------------KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                       + D  E        +L   +     T ++ F+Y  +            
Sbjct: 156 LTVTAPFAGRLTEVDAEEGDSVQNGGKLAVLVDDSRMTLTQYFSYAYADQVYVGMSAGVS 215

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN---------------- 214
           + S+ LN         ++  L +   +   +   +    A+++                 
Sbjct: 216 VASLMLNLEGTVTDVQMVERLTAEGTRCFAVTVTVNNPGALTEGMTGAGYLIADSGEKIY 275

Query: 215 -------DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                  +   QE I  +   E+          +     L+     ++   L+ +++ + 
Sbjct: 276 PAVEGSLEYADQETIQAQVAGEITYADAVPYQTVSAGQPLFTVDGSDYEEQLETVNKRIT 335

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMK-----I 321
           Q +        K+T  E++R   ++ + I+G     +  S     +  + P M+      
Sbjct: 336 QTEEEITSAQEKITEAEESRSDYSVTAEISG-----KVISVG--VRAGESPRMEATTAVT 388

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           + +     I A +    I  ++ G   T+     A   EK ++  + +I      +  N 
Sbjct: 389 IYNMDTMTITANIDELDIDKIEMGMDVTIV----ASSGEKTYRGTVTEISY----EATNS 440

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               Y+ + ++I          EL  G       +  +
Sbjct: 441 SGVAYFPITIEIDSAG------ELSAGVNVSYYISTGD 472


>gi|291616985|ref|YP_003519727.1| EmrA [Pantoea ananatis LMG 20103]
 gi|291152015|gb|ADD76599.1| EmrA [Pantoea ananatis LMG 20103]
          Length = 366

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 103/312 (33%), Gaps = 24/312 (7%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +  + F++ + +      +  + Q +       +   +++   +      L MK   + +
Sbjct: 59  RGQVTFISPQVNGYLTQVDVVDLQPVKKGQLLMTIDDRIYRQRVHQAQAQLAMKQAALNN 118

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               RL  +      +A L + +          +       DL + E +    +L +RE 
Sbjct: 119 NQQQRLSAQATIQSNKAALENAKAQA------VKSGL----DLKRVENLAADGSLSVRER 168

Query: 234 IHEQKNMLRHINEL-YDEANLEFANY-LKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +    + + +L   EA +  A   L+ +  +    +   A   + L + E       
Sbjct: 169 DAARAANAQGLAQLHQAEAQVAVAQQNLQTVIVNRASLEGDVASAKAALELAEIDLANTR 228

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP  G +          Y      L  +VP+ K     A     Q+ H++ G   T+R
Sbjct: 229 ITSPDEGQLGQLSVR-KGAYVTAGTRLTSVVPNHKWII--ANYKETQLAHIRPGLPVTIR 285

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEV--ILKITDLAFSDNNIEL 405
                    K F+  +E + P    +      +  T  + ++   + +      +   +L
Sbjct: 286 VDALD---GKTFQGRVEYLSPAAGSEFSAISPDNATGNFVKIAQRIPVRIDVAPEVQQQL 342

Query: 406 RNGFPAEVLFTA 417
           R G   EV    
Sbjct: 343 RPGMSVEVSIDT 354



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 72/216 (33%), Gaps = 20/216 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +  +R   +      ++    ++ L  W +  P   SV S+        V  I    +G 
Sbjct: 14  RANRRRILSIALGSGIVVTGVLVILYAWQLW-PFTSSVQSTENAYVRGQVTFISPQVNGY 72

Query: 67  IKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSI-----KNLRCHIDTEK 114
           + +  V +   + +G  L+T +D        +    + +K+ ++     + L      + 
Sbjct: 73  LTQVDVVDLQPVKKGQLLMTIDDRIYRQRVHQAQAQLAMKQAALNNNQQQRLSAQATIQS 132

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR---- 170
           +     N K   ++   + +  + L   G              +     L     +    
Sbjct: 133 NKAALENAKAQAVKSGLDLKRVENLAADGSLSVRERDAARAANAQGLAQLHQAEAQVAVA 192

Query: 171 ---MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              ++++ +NR  LE   +  +A L   + DL   +
Sbjct: 193 QQNLQTVIVNRASLEGDVASAKAALELAEIDLANTR 228


>gi|322418004|ref|YP_004197227.1| secretion protein HlyD family protein [Geobacter sp. M18]
 gi|320124391|gb|ADW11951.1| secretion protein HlyD family protein [Geobacter sp. M18]
          Length = 332

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 52/370 (14%), Positives = 114/370 (30%), Gaps = 84/370 (22%)

Query: 49  EILNEDNVVEIKSPFS----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            +    N+   +S       G + +  VE G  +  G  L                    
Sbjct: 34  SVTLSGNIEAHESAVGFKVPGRLTELPVEEGQLVKAGDTL-------------------- 73

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                +D           +  + E    +RE +L                 G+++     
Sbjct: 74  ---ARLDQ-----SDYRQQVQIDEATLGTREAEL-----------------GLATAGSRP 108

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + K    +S+   + D E K   L+   + ++KD                +++ Q R   
Sbjct: 109 QEKKAAHQSVLDAQADYELKKHDLQRYQALYEKD----------------EVSAQVRDTA 152

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR-DLEQNQRTFADEMSKLTIL 283
            +              L+  +   + A   +   L+ + R  +  N+         L + 
Sbjct: 153 TA-------------ALKRSHAALERARQNYDQVLEGVRREQIAINRAGVQSARQALELS 199

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
                  T+ +PI+G ++  +            P++ I       ++R  ++   +  VK
Sbjct: 200 RIKLGYTTLQAPISGVVL-VRHAELGEVLSAGTPVVTIA-DLDHLWMRGYLSETDLGRVK 257

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G  ATV+   Y     K ++  +  I         +++T +    ++    +   +   
Sbjct: 258 LGQAATVKTDTYP---GKAYQGRVSFISSQAEFTPKSVETHKERVTLVYRIKIDLENPGH 314

Query: 404 ELRNGFPAEV 413
           EL+ G PA+ 
Sbjct: 315 ELKPGMPADA 324


>gi|16331629|ref|NP_442357.1| hypothetical protein sll0180 [Synechocystis sp. PCC 6803]
 gi|1001690|dbj|BAA10427.1| sll0180 [Synechocystis sp. PCC 6803]
          Length = 501

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/319 (12%), Positives = 108/319 (33%), Gaps = 22/319 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +   + G Q+ +G P+L  E  +  + ++    ++   R +    ++ L    ++ 
Sbjct: 73  GRILRIYAQWGQQVNEGDPILLLEPTQQQENVNAAVGNLNIQRSNFQVSEANLRTSESER 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D  +    ++E  L   +    ++  +V     + + R+         ++ L +++ +  
Sbjct: 133 DAAQSFVTTQEANLARAIADLANSQ-EVLKTREADLKRA-------QANLNLAQINFKRA 184

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             L+   +   Q        L +  A ++      ++ V  +   ++ N          +
Sbjct: 185 QFLVETGVQPQQDLDNRTTELEDARANTE----AAQKTVQAAKATVQANQSSVSASRSAV 240

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +  D         +      +   +        +L    +      +L+P++G +V N 
Sbjct: 241 QQAKDNYQAAV-QRVSASRATINAQKGAIEQAQGQLGATSQELIYNRVLAPVSG-VVGNL 298

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                ++ +  Q    I  ++    +   V  ++   ++ G    V       +R     
Sbjct: 299 PLQIGDFVRTGQSFTTIT-NNNEFELDINVPVERYNDLRLGLPVEV-------VRSDGQA 350

Query: 365 AIIEKIDPIISQQDNNLQT 383
             + +I  I    + N Q+
Sbjct: 351 GEVGRISFISPTANRNDQS 369


>gi|51892947|ref|YP_075638.1| hypothetical protein STH1809 [Symbiobacterium thermophilum IAM
           14863]
 gi|51856636|dbj|BAD40794.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 529

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/369 (11%), Positives = 107/369 (28%), Gaps = 28/369 (7%)

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             VE G Q+ +G  L+  +  E  + +  K+  +  L+   + E+      +    +   
Sbjct: 48  VYVEAGQQVEEGQLLVELDATELQEEVKTKERDL--LQAQRELEELLRQMESAPLQLERN 105

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             E+R++                 +  +  +   +    +++ +      +     +   
Sbjct: 106 LQEARQQLAEAQSNLARVKAGGGESSDVERLRAQIDQLRSQVAAAQQPVEEARENLAAAE 165

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY---------------KSTLELRENI 234
           A   ++  D    +         +  + + +  V                          
Sbjct: 166 AAYLANPSDSQAAQAYRAAEEAYREAVRKSQATVQEAAEKLAEAEAELAALLEGSQDGAS 225

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTREQKT 291
            E    L  I     E  ++ A        D+ Q    +       + L  L    E   
Sbjct: 226 RELNVRLAEIQVSLAEVAVKEAEEAVRRGPDMGQVELARARVEAAQATLDKLRANLEATR 285

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I++   GT++        +  QQ   L++ V   +   +  +V    +  ++ G    V 
Sbjct: 286 IVAAAPGTVLSVHV-KDGDPVQQGASLLR-VGDMERMELIGQVEAVDLDSLEPGQPIMVT 343

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT---DLAFSDNNIELRNG 408
                      F+  + +I    +Q ++       Y +   +T        + +  L++G
Sbjct: 344 SSLLPLA---SFEGTVTRISQQTAQSNDGFYGGPIYYMGDTVTFEVRGEVMNADGRLKSG 400

Query: 409 FPAEVLFTA 417
              E+    
Sbjct: 401 MSVEMRIQT 409


>gi|29345971|ref|NP_809474.1| hypothetical protein BT_0561 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29337865|gb|AAO75668.1| putative ABC transport system, lipoprotein [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 304

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 106/290 (36%), Gaps = 41/290 (14%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++      +  QL    G       +V       +Y         M+S+   R DL  + 
Sbjct: 39  IVSAEAAGKLLQLEVEEGTRLKAGEEVGLVDTVQLYLKKLQLEASMKSVESQRPDLAKQI 98

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  +  +++ Q++   ++NL    A +Q  L+  +  V     +L   I ++ ++++  N
Sbjct: 99  AATKQQITTAQREKKRVENLLAAGAANQKQLDDWDAQVTLLQQQL---IAQESSLMKSTN 155

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L ++ N         +S  + Q               E    +  I SPI GT+     
Sbjct: 156 SLTEQGNS--------VSIQVAQV--------------EDQLNKCHIQSPIEGTV--LAK 191

Query: 306 FSSSN-YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           ++     A   +PL K V      Y+RA VT +Q+  VK G   TV +  Y +  +K + 
Sbjct: 192 YAEGGELASVGKPLFK-VGEVDRMYLRAYVTSEQLSQVKLGDKVTV-YSDYGNSEQKAYP 249

Query: 365 AIIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            ++  I              N +    Y V + +       N+  L+ G 
Sbjct: 250 GVVTWISDRSEFTPKTILTKNERANLVYAVKIAV------KNDGSLKIGM 293



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 84/232 (36%), Gaps = 27/232 (11%)

Query: 26  IGIIGLITWSILLPIEISVS---SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           IGI G+  W +            ++G     +  V + +  +G + + +VE G+++  G 
Sbjct: 7   IGIYGMAVWMLSA-CGNGTPDYDATGTFEATE--VIVSAEAAGKLLQLEVEEGTRLKAGE 63

Query: 83  PLLTFEDIE----------TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            +   + ++          +   ++ ++  +         + +       + + L  A  
Sbjct: 64  EVGLVDTVQLYLKKLQLEASMKSVESQRPDLAKQIAATKQQITTAQREKKRVENLLAAGA 123

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS------- 185
           + ++QL D+  +      ++     SS+ +S      +  S+ +    +E++        
Sbjct: 124 ANQKQLDDWDAQVTLLQQQLI-AQESSLMKSTNSLTEQGNSVSIQVAQVEDQLNKCHIQS 182

Query: 186 ---SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                + A  +   +  ++ K LF+   V +  L         S ++L + +
Sbjct: 183 PIEGTVLAKYAEGGELASVGKPLFKVGEVDRMYLRAYVTSEQLSQVKLGDKV 234


>gi|297181441|gb|ADI17629.1| multidrug resistance efflux pump [uncultured alpha proteobacterium
           HF0130_20P23]
          Length = 385

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 116/325 (35%), Gaps = 20/325 (6%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +     ++ ++    + +D    +  V E    S+ + L       ++   ++       
Sbjct: 57  ETENAYVKTNVIAISADIDGRVTEVFVDENQLISKGDLLFKLDPNTYAVAIQMAESKREK 116

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V + +         I     + +  ++  +A ++ H+++    + L +K+  ++  L++ 
Sbjct: 117 VRQDISALQAEYYQILAEIEEKKANAAYKKADVAYHKREARRQRMLIKKSITTRARLDEA 176

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E  + ++  EL     E     + I  +      +                  F    ++
Sbjct: 177 ESKLDEAEFELLAANQEVLTRKQKIKTVLARLGGDPNRSF--------DQHPDFIGAEAE 228

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L++ +       + +P+ G +   +      + +  +P   I+  +   +I A +   Q+
Sbjct: 229 LSLAKMNLGYTEVRAPVGGIVTRLKL-EPGEWVESGEPAFGII-ANNRVWIEANLKETQL 286

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT- 394
            HV +G   TV    Y D+    ++A +  I P    +         +  + +V+ ++  
Sbjct: 287 THVVEGQKTTVEVDAYPDVI---WEAKVASISPATGAEFSVLPPQNASGNWVKVVQRLPV 343

Query: 395 --DLAFSDNNIELRNGFPAEVLFTA 417
             ++  ++N   LR G  + V    
Sbjct: 344 RIEILSTENKPPLRAGMTSTVSIDT 368


>gi|310644356|ref|YP_003949115.1| efflux system [Paenibacillus polymyxa SC2]
 gi|309249307|gb|ADO58874.1| Putative efflux system [Paenibacillus polymyxa SC2]
          Length = 448

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 48/385 (12%), Positives = 116/385 (30%), Gaps = 55/385 (14%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    I  S    G    ++    +    SG I+   +  G ++ +G  L T +  +  D
Sbjct: 44  AAKGSINDSTGIIGSFAPKETAQ-VSPKISGKIQSINLTVGQKVNKGDTLFTIDQKDIQD 102

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            I   + S +    ++   +S                                       
Sbjct: 103 SIKQSQESYQVALANLKQAESGAA------------------------------------ 126

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +     S+    + +     +    +      +  +   Q  L   + LF   A+SQ+
Sbjct: 127 QSVQQSESSVDQAKSALVQQDNSITQAQTSLLDAQNSVRDAQNTLNRNQQLFSVGALSQS 186

Query: 215 DLNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +L Q +    K+   +    I          +      N + +  L +    ++  + + 
Sbjct: 187 ELEQSQIAYRKAQTAVENAQIALHNAQTSKESAQTTYNNAQKSLRLAQQKTGIDVARASV 246

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               + L           + +PI+GTI                 ++ I  ++     +  
Sbjct: 247 NQAKASLDTARSQLVDAVVKAPISGTISVVTGV-QGQMVSAQSAVVTIA-NTNPIIAKVN 304

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V+  ++  ++ G + TV          K+ +A +  ++P++            Y V + +
Sbjct: 305 VSESELLKMQVGSSVTVGVDSLD----KRIEARVSAVNPVMDNDLKA------YPVEISV 354

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAK 418
                 + + EL++G    V    +
Sbjct: 355 P-----NGSGELKSGMVVTVYMKTE 374


>gi|114797985|ref|YP_761099.1| membrane fusion protein family protein [Hyphomonas neptunium ATCC
           15444]
 gi|114738159|gb|ABI76284.1| transporter, membrane fusion protein (MFP) family [Hyphomonas
           neptunium ATCC 15444]
          Length = 392

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 116/362 (32%), Gaps = 66/362 (18%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I   QV  G ++  G  L T +D E    +   +     LR  +  E++      +K
Sbjct: 75  SGRITSVQVNEGDRVSAGDILYTIDDREAVFTLAQLEAEATRLRAEMAREETRAGLATSK 134

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                             S V       L+   S+   R +LE 
Sbjct: 135 AG--------------------------------SQVAARRAGTLSASASVEAARSNLE- 161

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                       Q+D    K+LFE+  + Q++L+Q      K+ L+ R     +    R 
Sbjct: 162 ----------IAQRDYDRTKDLFERGLMPQSNLDQ-----AKNVLDTRAQALRRAEAERE 206

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI--- 300
                          ++ I  +L           +++   +   EQ TI SPI G +   
Sbjct: 207 TAAADQRTASITGQEVRLIDYELTVLGAALDQAEARVEAQKVVVEQHTIRSPIDGVVDEL 266

Query: 301 -VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
              N   S   Y       M +V      +I A +    I+HV+   +A VR        
Sbjct: 267 FFDNGEHSLRGY------RMALVHDPDAVWISANIKETDIRHVRPSASALVRA---DSDP 317

Query: 360 EKKFKAIIEKI-DPIISQQ---DNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVL 414
             +    + +I D  + +     N      + ++  +I   +A    +++LR G    V 
Sbjct: 318 SHEISGRVVRIHDATLGEAAMMPNPNANGVFTKITQRIGVRIALDPTDVDLRPGTMVRVR 377

Query: 415 FT 416
             
Sbjct: 378 IR 379


>gi|183600560|ref|ZP_02962053.1| hypothetical protein PROSTU_04146 [Providencia stuartii ATCC 25827]
 gi|188019837|gb|EDU57877.1| hypothetical protein PROSTU_04146 [Providencia stuartii ATCC 25827]
          Length = 360

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/343 (11%), Positives = 111/343 (32%), Gaps = 28/343 (8%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           T            ++ +   ++      KS +    ++  V +  +    + + +   + 
Sbjct: 33  TLNWDRWQSNRRYQESNNAYIKSDSAILKSRMTGYISRILVEDYQYVREGDVIAEINNQE 92

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                ++         + L      ++   L    L N+       +S  Q+   + K L
Sbjct: 93  ELLNQQIAKANYKKAQQQLNNLADEIKEYDLTIEKLWNRYKAAGIEVSQMQRSPLLRKEL 152

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +  A++  +             +   ++     + +     +++A        ++ +  
Sbjct: 153 IKSGAITSQNYL-----------DANSDLQRLIKLEQAAKAEWEQAKQSKLLLAQQENIR 201

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L +     A+               TI +P  G +   +     +       ++ + P S
Sbjct: 202 LAERDIALAN----YQQANTQISYATITAPFDGQLNKIKLN-VGSLVTPGTEIVTVTPRS 256

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD----NNL 381
           +   I A +   Q+++V+ G +  +    + D++   F  ++  I    S +      + 
Sbjct: 257 QPYVI-AHLKETQLKNVQSGQSVAISVDAFPDMK---FSGVVRDIGAQSSGESALIPADN 312

Query: 382 QTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +  + +V+    + I+ L+      +LR G    V    ++T
Sbjct: 313 SSGNFTKVVQRIPVYISLLSEQSAIDKLRPGMSVIVNIDTQST 355


>gi|323344147|ref|ZP_08084373.1| hypothetical protein HMPREF0663_10909 [Prevotella oralis ATCC
           33269]
 gi|323094876|gb|EFZ37451.1| hypothetical protein HMPREF0663_10909 [Prevotella oralis ATCC
           33269]
          Length = 437

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 69/436 (15%), Positives = 147/436 (33%), Gaps = 44/436 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L+    +  I + GL+  S       ++ +   I +    VE+ +  +G ++   V +  
Sbjct: 30  LQWGITVIAIVLFGLLLGSYFFKYPDTLIAPVVITSSSTPVELNAYATGKLENLFVRDKQ 89

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G  L   E+   +  +             ++         N    +L K  +    
Sbjct: 90  NVQAGDYLAIIENNANSQDV-----------LMLNKIFQKWQSKNLSSSLLYKKLKGYTL 138

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL---ENKSSLLRALLS 193
           +L D    Y      +  Y + +       KL   ++    +++L        +L A  +
Sbjct: 139 RLGDVQLPYSGFMEALQYYILYTKTNYYPQKLALKQNQLSKQVELDLNRKHEYILHAQQA 198

Query: 194 SHQKDLTMMKN-LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              K++ +  + LF K   +  + +       +S      +I  QK +         E  
Sbjct: 199 DISKNIYLRDSALFAKKIKTGEEFDNSRYTYLQSHQTQLNDIRTQKEVQMQ-KLQDREVM 257

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           L+     KE            AD++     ++  ++   I++PIAG +     +S +   
Sbjct: 258 LDLEQQYKETHEKSILELNRAADQLG--NAIKLWQKNYLIVAPIAGYVNMMSVWSKNQNV 315

Query: 313 QQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              + +M ++P +    I +AK        ++       R  +Y D      + I+  I 
Sbjct: 316 TAGELIMIVMPKTPTESIGKAKFPALGAGRIQINQRVITRLNNYPDEEFGFIEGIVSNIS 375

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP--------AEVLFTAKNTTLA 423
            I  +  N       Y V +K  +   ++    L    P        A+++    +  L 
Sbjct: 376 DIPDKDGN-------YIVEIKFPNHLRTNYGKNL----PQTKQILGNAQIIIK--DKRLI 422

Query: 424 QEIIHPITDNWPKIFE 439
           +  I P+     KIF+
Sbjct: 423 ENFIQPL----EKIFK 434


>gi|218660743|ref|ZP_03516673.1| probable protein secretion protein, HlyD family [Rhizobium etli
           IE4771]
          Length = 312

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 99/292 (33%), Gaps = 28/292 (9%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E + +       S  +  F   +      L ++  ++ ++  +      + +  +A L  
Sbjct: 19  ENEAVKAGQVLFSLRADSFKIALDGAKAQLGVQRNQIMNLKASYQQSLAEITQAQADLPY 78

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           +Q+     +NL    + +Q+  ++ +  +  +  ++     E    L  +    D+   E
Sbjct: 79  YQEQFDRQQNLVNNGSATQSAYDEAKHNLEAAQQKVTVAKAEAATTLAQLGGSADQPIEE 138

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              YL+                 S +   ++  +   + +P  G +    +    +Y Q 
Sbjct: 139 NPLYLQ---------------AKSNVDNAQRELDHSVVKAPFDGIVTNVNALQVGSYLQA 183

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           SQ    +V  +   +I A     ++ +VK G TA +    Y  +    +K  +E I P  
Sbjct: 184 SQQGFSLV-ATDHLWIAASPKETELTYVKPGQTAEIYVDTYPGVT---WKGKVESISPAS 239

Query: 375 --------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                   +Q       +    + ++++ +  +     LR G    V     
Sbjct: 240 GSSFALLPAQNTTGNWVKVVQRIPMRVS-IEDTQGKPPLRVGMSTVVDVETG 290


>gi|182412738|ref|YP_001817804.1| secretion protein HlyD family protein [Opitutus terrae PB90-1]
 gi|177839952|gb|ACB74204.1| secretion protein HlyD family protein [Opitutus terrae PB90-1]
          Length = 335

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 114/370 (30%), Gaps = 82/370 (22%)

Query: 50  ILNEDNVVEIKSPFS----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           ++   N+  + +       G +    V+ G+++  G  +   +D E T  + L++  +  
Sbjct: 40  LVLSGNIEVVDAQLGFKVPGRVVARTVDEGARVTAGQLIARLDDAEQTQELALRRAELAA 99

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           +   +   ++                 SR +++   L   HS  ++     +       +
Sbjct: 100 VEAVLAELEAG----------------SRPQEIAAALAGLHSAEAERDRARLDF----TR 139

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
            +  R R +  +R D E   +LL+   +   +    +  L                    
Sbjct: 140 AQELRARDVIADR-DFETAQALLKVAEARAAEAGERLALL-------------------- 178

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
                 E I + +            A    AN                            
Sbjct: 179 QAGPRTETIQQARARTEQARAAVALAETRLAN---------------------------- 210

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 +LSP+ G ++ +       +     P++  V      ++RA V    + HVK G
Sbjct: 211 ----TQLLSPLTGQVLSHNI-EPGEFVAAGTPVVT-VADLAHVWVRAYVNQTDLGHVKLG 264

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
               VR   + D      +  +  I          +QT +    ++    +  ++ N EL
Sbjct: 265 QKVAVRTDTFPDKTY---EGTVGFISSEAEFTPKTVQTPKERVKLVFRIKVDVANPNDEL 321

Query: 406 RNGFPAEVLF 415
           ++G PA+V  
Sbjct: 322 KSGMPADVTI 331


>gi|325525706|gb|EGD03461.1| multidrug resistance protein A [Burkholderia sp. TJI49]
          Length = 372

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 41/366 (11%), Positives = 94/366 (25%), Gaps = 86/366 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V +   +  G PL+              ++  +  +  +D   +  D     
Sbjct: 75  SGYVTDVYVRDNQAVKAGDPLV--------------RLDTRQYQVSLDQALATAD----- 115

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                              +    +      +     N    E 
Sbjct: 116 -----------------------------------ARRADIARAEADINQQRANLEQAEA 140

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           ++ + +        +      L    A +   +            EL+    +    L  
Sbjct: 141 QAKVSQINARHASDEYARYAPLAATGAETHERV-----------AELKSTRDQALATLAA 189

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            N     A  + A++    +  L+Q +       +         +   + S + G +  +
Sbjct: 190 NNASIAAARTQIASF----TAQLQQARAQLEAAQASAAQSRLDLDNTIVRSTLDGRV-GD 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     Y Q    L+ +VP   +  + A     QI  ++ G    +      D      
Sbjct: 245 RTVRVGQYVQPGTRLLTVVPVDAIYLV-ANFKETQISRMRVGQHVELHIDALPDDT---L 300

Query: 364 KAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDNNIELRNGFPAEV 413
             +++   P    Q         T  + +      V ++I   A +     L  G    V
Sbjct: 301 SGVVDSFAPGTGAQFALLPPENATGNFTKIVQRVPVRIRIAPNARAQQ--RLLPGLSVTV 358

Query: 414 LFTAKN 419
               ++
Sbjct: 359 DVDTRS 364


>gi|157828204|ref|YP_001494446.1| multidrug resistance protein A [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932907|ref|YP_001649696.1| multidrug resistance protein A [Rickettsia rickettsii str. Iowa]
 gi|157800685|gb|ABV75938.1| multidrug resistance protein A [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165907994|gb|ABY72290.1| multidrug resistance protein A [Rickettsia rickettsii str. Iowa]
          Length = 355

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 87/263 (33%), Gaps = 11/263 (4%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L      + +   N   +E K S+ R+ L    + L + K  F+  A     + +  +  
Sbjct: 99  LAALEASIEACIKNIEIIEQKISIGRSSLEQAAEKLKLNKISFDIVATDFMRVQELNKAK 158

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           + S   L ++ +  +       +   + ++    +L+ +  +    Q    +      + 
Sbjct: 159 FASPKTLDDSKNAYQKAKTDYKQAQLDLDIS-KQHLQLLELEKAAEQEKLKELTENKKVT 217

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            ++ +   +++ + G I  N S    NY    + L  IV      YI+A     QIQ  K
Sbjct: 218 LRSLQNTKLIAMVPG-IFGNSSLEVGNYIVPGRVLFSIV-QDNTMYIQANFKETQIQKFK 275

Query: 344 KGYTATVRFPHYAD-IREKKF----KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
            G    + F      +   K      A   K   I         T+    V + I    F
Sbjct: 276 SGMKVKIEFDALPKKVIYGKIRNIAPATGSKFSLIPPDHATGNFTKSVQRVPVLID---F 332

Query: 399 SDNNIELRNGFPAEVLFTAKNTT 421
              N  L  G  A V      +T
Sbjct: 333 ESPNANLVPGMSAIVSIRTDQST 355



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 63/193 (32%), Gaps = 23/193 (11%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
            W+     + +         + ++  + +  SG++ K  V + +++ +G  +   +D + 
Sbjct: 43  VWANTQSTDNAYI-------DADISNVSAEVSGVLTKLFVTDNTKVNKGDLIGEIDDRDY 95

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL------LDFLGKYH 146
                     +  L   I+     ++ +  K  +   + E   E+L       D +    
Sbjct: 96  KA-------KLAALEASIEACIKNIEIIEQKISIGRSSLEQAAEKLKLNKISFDIVATDF 148

Query: 147 STCSKVFNYGISS---VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               ++     +S   +  S              +LDL+     L+ L      +   +K
Sbjct: 149 MRVQELNKAKFASPKTLDDSKNAYQKAKTDYKQAQLDLDISKQHLQLLELEKAAEQEKLK 208

Query: 204 NLFEKNAVSQNDL 216
            L E   V+   L
Sbjct: 209 ELTENKKVTLRSL 221


>gi|134299443|ref|YP_001112939.1| secretion protein HlyD family protein [Desulfotomaculum reducens
           MI-1]
 gi|134052143|gb|ABO50114.1| secretion protein HlyD family protein [Desulfotomaculum reducens
           MI-1]
          Length = 328

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 63/404 (15%), Positives = 128/404 (31%), Gaps = 87/404 (21%)

Query: 18  KRMTLLSIIGII-GLITWSI---LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           KR+    ++G++ G++ W       P E ++++SG I      VE+ +   G I    V 
Sbjct: 3   KRVVAFILVGLLAGVLYWGYQRFYNPQESALTASGTIEVT--KVELSAKLPGTIGAISVV 60

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++ +G  +                  I         E+ AL  L  +  + +    +
Sbjct: 61  AGDKVKKGQLV----------------GQIIRNDLVAQKERDALGVLKTESQLKDLNSGA 104

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R +++ +     +                                           A   
Sbjct: 105 RVQEIKEASANVNVAQ----------------------------------------ASYE 124

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               D    + LF+  A+ Q  L + +  +     +L          L  + E      +
Sbjct: 125 KALADYERGEKLFQAAALPQEQLEKLQTDLRIKENQL----ASFSAKLSLLEEGNRPDAI 180

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + A    E +R +             L   E       I SP++G ++  ++     + Q
Sbjct: 181 KAAQIEMERARAI-------------LKASEALLADTKIFSPVSGIVLS-KNQEPGEFVQ 226

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               L+ +   +   +IR  V    +  ++ G           D    + + I  + +  
Sbjct: 227 AGVSLVTVADLND-MWIRVYVPTDDLPKLRLGQEVYFTVSGSNDHYAGQIEEIASQGEYT 285

Query: 374 -ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             + Q  N +T   Y V +++T       N  L+ G PA+V+F 
Sbjct: 286 PKTIQTKNERTNIVYAVKIRVT-----KPNGTLKPGMPADVVFQ 324


>gi|312878287|ref|ZP_07738207.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311794936|gb|EFR11345.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 413

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 12/181 (6%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E + +    N+   +  +       ++S+ L+  Q    +   +L   E+  E   I +
Sbjct: 36  GEVEEIFARNNQFVKKGAVLLKLSNDDLSKQLKNYQTQLKNLQDQLKDAEENLENYYIKA 95

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P  G +     F   +  +  + L   V  +K    R  +    I  +K G    +    
Sbjct: 96  PFDGVVTNIN-FKKGDNIKAGEVLAT-VFDNKNLVFRVDIDELDIAKIKVGQKVNITVDA 153

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
             + +       + KI P+     N + T   Y V + I     +  N+++  G  A   
Sbjct: 154 LPETQTNPLTGKVSKI-PLEGTTQNGVTT---YSVTISID----NPKNLKI--GMNANAE 203

Query: 415 F 415
            
Sbjct: 204 I 204



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 24/54 (44%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           G +++    N   + +G  LL   + + +  +   +  +KNL+  +   +  L+
Sbjct: 36  GEVEEIFARNNQFVKKGAVLLKLSNDDLSKQLKNYQTQLKNLQDQLKDAEENLE 89


>gi|225163954|ref|ZP_03726244.1| efflux transporter, RND family, MFP subunit [Opitutaceae bacterium
           TAV2]
 gi|224801447|gb|EEG19753.1| efflux transporter, RND family, MFP subunit [Opitutaceae bacterium
           TAV2]
          Length = 450

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 76/211 (36%), Gaps = 21/211 (9%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q+ LNQ E  +  +        H    +         E NL     L + +  LEQ +  
Sbjct: 98  QSRLNQAEAQLANTQAN-----HTLVKLNADRVRSLRERNLVSQQELDQANAQLEQAEAQ 152

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVPHSKLTY 329
              + + +   +    +  I +PI GT++  Q+ +          +  L  +V   +   
Sbjct: 153 LKIQRASVETAKVDLTRCVIDAPIDGTVLDRQA-TVGKTVAASLNAPTLFILVTDLRKLQ 211

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I A +    I +V++G T       + + R   F   + +I    + Q N         V
Sbjct: 212 INAAIAEADIGNVREGQTVHFTVDAFPNRR---FDGTVAQIRNSPTTQSN---------V 259

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +   T +A +++++ L+ G  A V       
Sbjct: 260 VTYATIIAVNNDDLSLKPGMTANVSVVVNQR 290



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 46/124 (37%), Gaps = 4/124 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  SV+++G +   + + E+ S  S II +  V+  S + +G  L   +       ++
Sbjct: 44  GNLTQSVTATGTLEPVEKI-EVSSQISAIITEVPVDYNSAVKKGDVLARLDPATYQSRLN 102

Query: 98  LKKVSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  + N + +   +      +  L  +  V ++  +    QL     +     + V  
Sbjct: 103 QAEAQLANTQANHTLVKLNADRVRSLRERNLVSQQELDQANAQLEQAEAQLKIQRASVET 162

Query: 155 YGIS 158
             + 
Sbjct: 163 AKVD 166


>gi|307308861|ref|ZP_07588549.1| secretion protein HlyD family protein [Sinorhizobium meliloti
           BL225C]
 gi|307320309|ref|ZP_07599727.1| secretion protein HlyD family protein [Sinorhizobium meliloti AK83]
 gi|306894031|gb|EFN24799.1| secretion protein HlyD family protein [Sinorhizobium meliloti AK83]
 gi|306900666|gb|EFN31278.1| secretion protein HlyD family protein [Sinorhizobium meliloti
           BL225C]
          Length = 365

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/358 (12%), Positives = 105/358 (29%), Gaps = 81/358 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +   +VE+   +  G  L   +D +    +     +++     +    + +       
Sbjct: 76  GYVTAIEVEDNQAVRAGDVLFRIDDRDYRAKLAQAVANVEAAEARLTNVDAEM------- 128

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                             ++  +L  +    R   +  L+L  K
Sbjct: 129 ----------------------------------ALQHALIRQAEAQRRSVVAELNLAAK 154

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +S  R             + L   N +SQ  +++ +    ++   +       +   + I
Sbjct: 155 ASDRR-------------RELIRSNTISQAHVDESDAAKSRAEANVLAASATVEAQQQRI 201

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             L  +     A   +  +                  +     E   + +P+ G ++ N+
Sbjct: 202 AVLAAQREAAVAAVAQAEAAR---------------DLAGIDLESTVVRAPV-GGVIGNR 245

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                        L+ IVP   +  + A     Q++H++ G  A++    Y        +
Sbjct: 246 QVRVGRLVAPGASLLDIVPLDNVWIV-ANFKETQLEHIRPGQRASITIDGYPR---GALE 301

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNI--ELRNGFPAEVLF 415
            +++   P           +  T  +  V+ ++   + F+ N +   L  G  A V  
Sbjct: 302 GVVDSFSPGSGSAFSLLPADNATGNFVRVVQRVPVKIRFAGNPLSGRLLPGLSARVEI 359


>gi|229586492|ref|YP_002844993.1| Multidrug resistance protein A [Rickettsia africae ESF-5]
 gi|228021542|gb|ACP53250.1| Multidrug resistance protein A [Rickettsia africae ESF-5]
          Length = 350

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 52/394 (13%), Positives = 114/394 (28%), Gaps = 86/394 (21%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
            W+     + +         + ++  + +  SG++ K  V + +++ +G  +   +D   
Sbjct: 38  VWANTQSTDNAYI-------DADISNVSAEVSGVLTKLFVTDNTKVNKGDLIGEIDD--- 87

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                      ++ +  +   +++++      +++E                        
Sbjct: 88  -----------RDYKAKLAALEASIEACIKNIEIIE------------------------ 112

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                            ++    ++      K  L +        D   ++ L +    S
Sbjct: 113 ----------------QKISIGQISLEQAAEKLKLNKISFDIVATDFLRVQELNKAKFAS 156

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
              L+  +    K+  + ++   +     +H+  L  E   E               Q  
Sbjct: 157 SKTLDDSKNAYQKAKTDYKQAQLDLDISKQHLQLLELEKAAE---------------QEK 201

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
             +      +  ++ +   +++ + G I  N S    NY    + L  IV      YI+A
Sbjct: 202 LKELTENKKVTLRSLQNTKLIAMVPG-IFGNSSLEVGNYIVPGRVLFSIV-QDNTMYIQA 259

Query: 333 KVTPKQIQHVKKGYTATVRFPHYAD-IREKKF----KAIIEKIDPIISQQDNNLQTQEYY 387
                QIQ  K G    + F      +   K      A   K   I         T+   
Sbjct: 260 NFKETQIQKFKSGMKVKIEFDALPKKVIYGKIRNIAPATGSKFSLIPPDHATGNFTKSVQ 319

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            V + I    F   N  L  G  A V      +T
Sbjct: 320 RVPVLID---FESPNANLVPGMSAIVSIRTDQST 350


>gi|107022835|ref|YP_621162.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116686924|ref|YP_840171.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           HI2424]
 gi|105893024|gb|ABF76189.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116652639|gb|ABK13278.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           HI2424]
          Length = 475

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 42/405 (10%), Positives = 120/405 (29%), Gaps = 78/405 (19%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  +  + ++ +IG + W          +       + N + +    SG +
Sbjct: 129 ERKRPGKKPLIILGAVVLVLLIGGLVW-WFATRNQESTDDAY--TDGNAIAVAPHVSGYV 185

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V++ + + +G  L+  +               ++ R  +D  ++ L     + D  
Sbjct: 186 TRLAVDDNTFVRRGDVLVEIDP--------------RDYRAQVDAAQAQLGLAQAQLDAA 231

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
               +                   +      + YR  + ++    + Y   L  +++   
Sbjct: 232 RVQLD-------------------IARVQYPAQYRQARAQIESAEAAYRQALAAQSRQRA 272

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           + A  +S Q                  D    +R    + + + +      +++      
Sbjct: 273 VDARATSQQ----------------AIDAADAQRATADANVAMAQAQARTASLVPQ---- 312

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                      +++    +E+ ++      ++L           + +P  G +       
Sbjct: 313 ----------QIRQAETAVEERRQQVLQARAQLETANLNLSYCEMRAPSDGWVTRRNV-Q 361

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             ++ Q    +  IV  +   ++ A     Q++ ++ G    V    Y D+        +
Sbjct: 362 LGSFLQPGTSIFSIV--TPRVWVTANFKESQLERMRIGDRVDVSVDAYPDL---DLHGHV 416

Query: 368 EKI-----DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           + I         +    N     + +++ ++      D  +  R 
Sbjct: 417 DSIQLGSGSRFSAFPTENATGN-FVKIVQRVPVKIVLDGPLPTRP 460


>gi|39996581|ref|NP_952532.1| multidrug resistance protein [Geobacter sulfurreducens PCA]
 gi|39983462|gb|AAR34855.1| multidrug resistance protein, putative [Geobacter sulfurreducens
           PCA]
 gi|298505597|gb|ADI84320.1| multidrug resistance efflux pump, RND family, membrane fusion
           protein EmrA [Geobacter sulfurreducens KN400]
          Length = 372

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 57/316 (18%), Positives = 94/316 (29%), Gaps = 29/316 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +S +  ++++      A    + Q +             +   +S    +L M       
Sbjct: 69  ESHIHAVSSRVPGTVAAVYVTDNQAVKKGDLLAELDPSDYRTRVSEATAALAMARNETSG 128

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
            Y             RA L+    DLT    L  K  + +   ++ E     +  ++RE 
Sbjct: 129 DYAQVEAARAAVDHARARLAQADLDLTRGTALLAKEVIPREQFDRLETAKRVAVAQVREA 188

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +     I      +        +E    L   Q         L           IL
Sbjct: 189 EEQMRKAQAEIGLSGSGS--------REARVALRDAQ---------LATASLNLSYTKIL 231

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +   +S    N  Q  QPLM +V      +I A     Q+ H+K G   T    
Sbjct: 232 APADGYVTR-KSVEPGNTVQAGQPLMAVVDLDD-VWITANYKESQLTHMKPGQKVTFTVD 289

Query: 354 HYADIRE-KKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNG 408
            Y       +  +I+       S       T  Y +V+    +KI     SD    LR G
Sbjct: 290 AYPGRTFSGRIDSIMAGTGAAFSLLPPENATGNYVKVVQRVPVKIAVDRASDPGHLLRVG 349

Query: 409 FPA--EVLFTAKNTTL 422
                 V       +L
Sbjct: 350 MSVVPSVDV---ERSL 362



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 69/218 (31%), Gaps = 21/218 (9%)

Query: 15  ASLKRMTLLSIIGIIGLIT---WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
              +    L I+ ++G +    W +     I+  S+     E ++  + S   G +    
Sbjct: 31  KRRRAGIFLLILFVVGAVIGLRWLVHG---ITYISTDNAFVESHIHAVSSRVPGTVAAVY 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR-------CHIDTEKSALD-----F 119
           V +   + +G  L   +  +    +     ++   R         ++  ++A+D      
Sbjct: 88  VTDNQAVKKGDLLAELDPSDYRTRVSEATAALAMARNETSGDYAQVEAARAAVDHARARL 147

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                D+        +E +         T  +V    +      ++     +        
Sbjct: 148 AQADLDLTRGTALLAKEVIPREQFDRLETAKRVAVAQVREAEEQMRKAQAEI--GLSGSG 205

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDL 216
             E + +L  A L++   +L+  K L      V++  +
Sbjct: 206 SREARVALRDAQLATASLNLSYTKILAPADGYVTRKSV 243


>gi|107027305|ref|YP_624816.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116691298|ref|YP_836831.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           HI2424]
 gi|105896679|gb|ABF79843.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116649298|gb|ABK09938.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           HI2424]
          Length = 374

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 51/417 (12%), Positives = 126/417 (30%), Gaps = 65/417 (15%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
                R    +   +  +  + + G   W++   IE +  +        +VV + S  SG
Sbjct: 12  TARFSRRQLIAAGVVLAVIALAVFGWHWWTVGRFIESTDDAY----VRADVVTVSSRVSG 67

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + +  V++   + +G  L+  +D +    +D  + ++      +  E++A   L+    
Sbjct: 68  YVTQVAVDDNQPVKRGDVLVRLDDRDYRAKVDDAQAAVAAADATLQAEQAAAAMLD---- 123

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                                                       ++          +  +
Sbjct: 124 -------------------------------------------AQIGQQRSQIAQADADA 140

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  RA  +    D T  K L  ++A S     Q      K+  EL       +       
Sbjct: 141 AAARAEAARRDADATRYKQLLAESAASGQRWEQAHADALKARAELTRAGAAVR------- 193

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            +  +         ++ +  + Q +   A   +KL + +   +   I +   G++   ++
Sbjct: 194 -VQTDQQTVLQRRREQSTAAIAQARARLAAAQAKLALAQLDLDHTVIRATRDGSV-GQRA 251

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFK 364
             +  Y +   PL+ +VP S +  + A     Q+  +  G    +    Y       +  
Sbjct: 252 VRAGQYVEVGMPLLAVVPLSDVYVV-ANFKETQLGAMHDGQPVQIDVDTYSGHTLHGRVI 310

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTAK 418
            +        +    +  T  + +++ +I     +      + LR G         +
Sbjct: 311 GLAPGSGAQFALLPPDNATGNFTKIVQRIPVKIRVDTPPAGVVLRPGMSVIARVDTR 367


>gi|253571191|ref|ZP_04848598.1| predicted protein [Bacteroides sp. 1_1_6]
 gi|251839144|gb|EES67228.1| predicted protein [Bacteroides sp. 1_1_6]
          Length = 443

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 64/429 (14%), Positives = 153/429 (35%), Gaps = 36/429 (8%)

Query: 14  PASLKRMTLLSIIGIIGLI---TWSILLPIEISVSSSGEILNEDNVVEIK--SPFSGIIK 68
           P +  +    ++I    L+    W I  P +      G+I    N+  ++  +  SG ++
Sbjct: 30  PMTFGKWVARAVIFFFVLLLTMGWVIKYP-DTVT---GQIKINSNLSPVRLVANASGKMQ 85

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              +     + +G  +   ++  TT  +    + I NL    D         NN   +L 
Sbjct: 86  LLNITPQENVKEGQYIAIIQNSATTVDV----IRINNLIHAFD--------PNNLEMILH 133

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGI----SSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +    ++  L +   KY++  S + +Y       S  +  +  LT ++  ++   +  + 
Sbjct: 134 EKLFPKKVSLGELNLKYYAFLSALESYKRFLSGDSYKQQKRNLLTNIKWQHITATENSSG 193

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            ++ +  L   +K     + + +K+AV+ +D++        + L  +    E  ++   I
Sbjct: 194 INISQKKLDVTEKWYRKYQTMNKKDAVAGHDVDNILNDFLSAKLNYQNLKKENASIQLQI 253

Query: 245 NE-LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            E  Y    LE     K+    + +   T+ D    L + E    +    +P  G + + 
Sbjct: 254 AENEYQLNRLEIEQNEKDSQLQM-ELLTTYYDLRDNLKVWE---NKYIFKAPFTGKVEFL 309

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             +  + + Q  + +  I+P   +T  +  +       VK G    ++  ++        
Sbjct: 310 NFWVDNQFIQSGEEVFSIIPPQNITVGQMLLPASGAGKVKNGSNVIIKLNNFPYTEFGSI 369

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE----VLFTAKN 419
              +  I  I  +Q     + + Y + + +     ++    L   F  E         ++
Sbjct: 370 NGTVASISLITKEQKAQESSIDSYLITVDLPQGLKTNYGEVLE--FQYELGGIADIIIRD 427

Query: 420 TTLAQEIIH 428
             L + +  
Sbjct: 428 RRLIERLFD 436


>gi|221197189|ref|ZP_03570236.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD2M]
 gi|221203861|ref|ZP_03576879.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD2]
 gi|221176027|gb|EEE08456.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD2]
 gi|221183743|gb|EEE16143.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD2M]
          Length = 363

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 92/311 (29%), Gaps = 7/311 (2%)

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E +   ++     VL        +++L    +       +           L      +
Sbjct: 53  QESTDDAYVGGDVTVLAPKVAGFVDRILVTDNQRVKAGDVLVQLDARDYAAKLAQASAEV 112

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            + +    +LE K  L  A++  H  D         + A  +    +  +    S   + 
Sbjct: 113 DAAHSAVAELEAKQQLQDAVIGQHAADKNASSAELTRAAADRVRYRELVKADAVSNQLVE 172

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               +       + E  D A L     L  +   L   +      ++   +     E  T
Sbjct: 173 RADADYAKAHAAV-ERSDAALLASKRELDVLGAQLADARARVNTALAAQRVAALNVEYTT 231

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P+ G +  N++      A    PL+ IVP S   +I A     Q++ ++ G    V 
Sbjct: 232 IRAPVDGYV-GNRTGRVGMLANVGVPLLTIVPASG-LWIDANFKEDQLRKMRAGDRVDVS 289

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIE--LRN 407
                     +  ++        S       T  + ++   + +         +E  LR 
Sbjct: 290 LDASGARLHGRVDSVAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGLEQVLRP 349

Query: 408 GFPAEVLFTAK 418
           G  A V     
Sbjct: 350 GLSAVVTVHTD 360


>gi|186684140|ref|YP_001867336.1| RND family efflux transporter MFP subunit [Nostoc punctiforme PCC
           73102]
 gi|186466592|gb|ACC82393.1| efflux transporter, RND family, MFP subunit [Nostoc punctiforme PCC
           73102]
          Length = 541

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 42/326 (12%), Positives = 100/326 (30%), Gaps = 28/326 (8%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V IK    G + +  ++ G+++ QG  +++ E       +   K ++   +  +   K
Sbjct: 110 RSVIIKPQVEGRVTQIYIKEGNRVQQGQVIISLESDSVQAQLLQAKAALAQAQARLAELK 169

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +       +           + +L D                I S    +++  +R +  
Sbjct: 170 AG--TRQEEVAQARAQLTQAQARLRDAQSGSQPQEIAQAEAQIQSAKSDVELAQSRAKRY 227

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              R +       L   +   Q     +        V+Q  L Q  +    S  EL   +
Sbjct: 228 AQLRKEGAVSQDTLEGYVKEQQSAEAAL-------VVAQKRLAQLRQSRTSSVNELAGAL 280

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            +QK  LR +                    ++ Q +       +++   +   +   +L+
Sbjct: 281 EQQKQNLRQLENGSR-------------PEEIAQARSQVTQAAAQVQAAQVQLQYTKVLA 327

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P  GT+    +    +Y +++  L  +   +    +   V  ++ + ++ G    +    
Sbjct: 328 PFTGTVGDIPT-KVGDYVEKADQLTTLT-RNDSLELNISVPLEEAKKLRLGLLVQM---- 381

Query: 355 YADIREKKFKAIIEKIDPIISQQDNN 380
                +      I  I P  S     
Sbjct: 382 LNIQGQPTATGKISFISPDASSDSQT 407


>gi|260589551|ref|ZP_05855464.1| auxiliary transport protein, membrane fusion protein [Blautia
           hansenii DSM 20583]
 gi|260540119|gb|EEX20688.1| auxiliary transport protein, membrane fusion protein [Blautia
           hansenii DSM 20583]
          Length = 522

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 60/402 (14%), Positives = 129/402 (32%), Gaps = 49/402 (12%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF--EDIETTDLIDLKKVSI 103
           +SG +   +      SP +  I+   VE G  +  G  L+ F  +++E  +         
Sbjct: 60  ASGNVE-SEWKKTFYSPVNATIENMTVEAGDSVEAGQKLIAFNVDNLEADNQKAELTART 118

Query: 104 KNLRCHIDTEKSA-----LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             L      E++      +         LEK  E+++ +L D   +   T          
Sbjct: 119 GKLELEDAQEQANQAASKVAEAKADIPKLEKQIENKKNKLSDLRQQIAETQKNAQAQVQE 178

Query: 159 SVYRSLKMKLTRMRSIYLNRLD---------LENKSSLLRALLSS---HQKDLTMMKNLF 206
            V  + +  +    + Y   +D          + +   L+  ++     + D    ++L 
Sbjct: 179 EVESAYQAAVLAAETKYQEEMDTYNNVTKPEYDKELEALKQKINEGKGTETDKEDYRHLL 238

Query: 207 EK--NAVSQNDLNQQERIVYKS-TLELRENIHEQKNMLRHINELYDEANLEFANYLKE-- 261
           +         ++N  +  +  +   +      E +N+   +  L  E   + A    E  
Sbjct: 239 DNPPKVPELEEVNPADFQMTGTGMADTSALEAEMENVSSELAALQSELASKEALAQSETT 298

Query: 262 ----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                +++  +      +  +K         +K I +  +G I   +  S      Q   
Sbjct: 299 GLTDAAKEKIRISNNLTELETKNLQELLEEGRKGIEAEFSGVISDTKV-SQGATVTQGME 357

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L  +        + A ++      VK+G  ATV+         KK+   IEK++ I    
Sbjct: 358 LFTLQSMDD-VCVDASISKYDFDKVKEGQKATVKLGD------KKYNGTIEKVNRIAVPN 410

Query: 378 D------------NNLQTQEYYEVILKITDLAFSDNNIELRN 407
           +            +N     +  V  K++  A    N+ +  
Sbjct: 411 EKGAPTIGVVVHIDNPDDGIFIGVEAKVSIQAAEVKNVPILP 452


>gi|254469557|ref|ZP_05082962.1| fusaric acid resistance protein FusE [Pseudovibrio sp. JE062]
 gi|211961392|gb|EEA96587.1| fusaric acid resistance protein FusE [Pseudovibrio sp. JE062]
          Length = 381

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 64/382 (16%), Positives = 121/382 (31%), Gaps = 75/382 (19%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NV++I +  SG I +  + +  ++  G  L   +               +  +    
Sbjct: 42  VRANVIQIATRVSGPIVELPIVDNQKVEAGELLFIIDP--------------RTFQATYA 87

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +K+ LD   ++ + LEK  E+ E  +  +        S++ +                 
Sbjct: 88  QKKADLDQTVDQLNALEKEREAAEANVAQYRSNVEQASSELRSSI--------------- 132

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                             A L + + +L     L +   V+Q   +Q E+    +  +  
Sbjct: 133 ------------------ATLKNIKGNLDRNAKLLKDGYVTQRTYDQIEKSYIVALAD-- 172

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               + ++ L        EA    A  +  +    + N       M+ L   E       
Sbjct: 173 --TEQAQSGLAQAEAALVEAQASLAKVVASLGAKGKDN-AQLRSAMAALQTAELDLGFTQ 229

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P++G +         +   ++QP + +V  S   +I A     +I  +  G    + 
Sbjct: 230 VAAPVSGYVTNLNLR-LGSQTVENQPALALV-DSSSFWIDAYFPETKISRIDIGDKVVMT 287

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ---------------EYYEVILKITDL 396
              Y D         +E I   ISQ D +  +                +   V +KITDL
Sbjct: 288 LMAYPDQ---VVHGEVESIGWGISQSDGSTGSDLLPNINPTFEWIRLAQRIPVRVKITDL 344

Query: 397 AFSDNNIELRNGFPAEVLFTAK 418
                NI LR G    VL    
Sbjct: 345 ---PQNILLRVGTTVSVLVLTG 363


>gi|206602530|gb|EDZ39011.1| Putative secretion protein HlyD [Leptospirillum sp. Group II '5-way
           CG']
          Length = 317

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 99/260 (38%), Gaps = 26/260 (10%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           ++   L R+D    ++  + L   ++ + +  K+L  +NA+S  +  +   ++  +  + 
Sbjct: 77  VKGQELARID----TTGFQRLRQINESNQSAFKDL--QNAISTEESLKV--LLLNAESQY 128

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R  I      LR    +  +        + +    L Q ++    E  +L I E      
Sbjct: 129 RRGIR-----LRKGGFITAQDLENLRTAVDDDRSRLLQAKKVVLSERMRLEITESHPLNY 183

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           T+ SPI G +   +           QPL+ +V P     +I AKV   ++ +V+ G    
Sbjct: 184 TVHSPIDGQVAE-RIAQIGEVVSPGQPLLSVVNPQD--IWITAKVKETRMTNVRVGQPVD 240

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE- 404
           +    Y + +   F   +E+I P+ +           +  + +VI +I      D+    
Sbjct: 241 IDVDTYPERK---FHGHVERILPVSAAAVSLLPPENASGTFVKVIQRIPVRIHVDDAGPY 297

Query: 405 -LRNGFPAEVLFTAKNTTLA 423
            LR G   EV    +  +  
Sbjct: 298 ILRPGMSTEVRIHIRKGSPW 317



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 49/128 (38%), Gaps = 9/128 (7%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRC 108
            + N++ I +  +G + +F +  G  +++G  L   +      L  + +    + K+L+ 
Sbjct: 50  VDGNIILISANANGRVMEFPLNQGDPVVKGQELARIDTTGFQRLRQINESNQSAFKDLQN 109

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESR------EEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            I TE+S    L N      +    R       + L +         S++       +  
Sbjct: 110 AISTEESLKVLLLNAESQYRRGIRLRKGGFITAQDLENLRTAVDDDRSRLLQAKKVVLSE 169

Query: 163 SLKMKLTR 170
            +++++T 
Sbjct: 170 RMRLEITE 177


>gi|313675142|ref|YP_004053138.1| efflux transporter, rnd family, mfp subunit [Marivirga tractuosa
           DSM 4126]
 gi|312941840|gb|ADR21030.1| efflux transporter, RND family, MFP subunit [Marivirga tractuosa
           DSM 4126]
          Length = 446

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 92/303 (30%), Gaps = 41/303 (13%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L         +L    G   +    +      +   +L+     +          E    
Sbjct: 70  LSPDVAGEITELAVEEGDPVNKGDLLVKIRPDNFQSALERAQANLNQQKAALAQAEASLE 129

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +A L+  ++     K L+E+  +S +D    E  V    +   + +  +K++L     
Sbjct: 130 RAKAQLTQAKQTFERQKKLYEEKVISTSDY---EAAVANYQIAQNDKLASEKSVLA---- 182

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                                  + T     + +    +   + TI SP+ GT+      
Sbjct: 183 ----------------------ARYTVKSSQATVDEASENLRRTTIYSPVDGTVSKLSVE 220

Query: 307 SSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                          +M+I   +    +R  V    I  +  G TA +    Y  + EK+
Sbjct: 221 LGERVVGTQQMAGTEMMRIANLNN-MEVRVDVNENDIIRINIGDTANIEVDSYTYM-EKE 278

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKI-----TDLAFSDNNIELRNGFPAEVLFTA 417
           FK I+  I    +    +      +EV +KI      DL   D +   R G  A V    
Sbjct: 279 FKGIVTAI-ANTANDKASQDAVTEFEVKVKILNSSYKDLIKDDGDSPFRPGMTASVEIMT 337

Query: 418 KNT 420
           +  
Sbjct: 338 ETK 340



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 100/266 (37%), Gaps = 9/266 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V++SG +     V    SP  +G I +  VE G  + +G  L+          ++  + +
Sbjct: 56  VNASGTVQPVVEVKL--SPDVAGEITELAVEEGDPVNKGDLLVKIRPDNFQSALERAQAN 113

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS--V 160
           +   +  +   +++L+    +    ++ FE +++   + +       + V NY I+    
Sbjct: 114 LNQQKAALAQAEASLERAKAQLTQAKQTFERQKKLYEEKVISTSDYEAAVANYQIAQNDK 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN----AVSQNDL 216
             S K  L    ++  ++  ++  S  LR        D T+ K   E         Q   
Sbjct: 174 LASEKSVLAARYTVKSSQATVDEASENLRRTTIYSPVDGTVSKLSVELGERVVGTQQMAG 233

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            +  RI   + +E+R +++E   +  +I +  +     +    KE    +     T  D+
Sbjct: 234 TEMMRIANLNNMEVRVDVNENDIIRINIGDTANIEVDSYTYMEKEFKGIVTAIANTANDK 293

Query: 277 MSKLTILEKTREQKTILSPIAGTIVY 302
            S+  + E   + K + S     I  
Sbjct: 294 ASQDAVTEFEVKVKILNSSYKDLIKD 319


>gi|283478985|emb|CAY74901.1| HlyD family secretion protein [Erwinia pyrifoliae DSM 12163]
          Length = 410

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 58/417 (13%), Positives = 128/417 (30%), Gaps = 86/417 (20%)

Query: 7   KNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           KN  R     L  + +++++ + + L+ W +   IE +  +      E + V I    SG
Sbjct: 63  KNRPRPGKKPLIILAIVAVVMLSVALVFWLMNRNIETTDDA----FTEADAVTIAPKASG 118

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I + +V++  ++ +G  L+  +  + +   D                            
Sbjct: 119 YITQLKVKDNQRVKKGDLLVVIDVRDASAQRDRA-------------------------- 152

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLDLEN 183
                    + +L   + + H   +++    +   +       +L R  + YLN  + + 
Sbjct: 153 ---------QAELGVAVAQLHQAQAQLALARVQYPAQKEQALAQLARAEANYLNAREDDK 203

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +   +    +S                         +R +  ++ +LR    E KN    
Sbjct: 204 RQRGVDPRATS-------------------------QRNIDAASAQLRSAKAELKNAQAQ 238

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +         + A  +++    +E  Q       ++L           + +P  G I   
Sbjct: 239 VA-----VASQVALQIRQQETSVEARQSQVDQGQAQLNTASLNLSYTEVRAPYDGFITKR 293

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                    Q    L  +V      +I A     Q+  +K G    +    + D++    
Sbjct: 294 NV-QVGTLVQAGSSLFSLVSPD--MWIVANFKESQLARMKPGNKVDISVDAWPDLK---L 347

Query: 364 KAIIEKI--------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           K  ++ +            S+       +    V +KI   +  D N  L  G   E
Sbjct: 348 KGHVDSVQMGSGSRFSAFPSENATGNYVKIVQRVPVKIVIDSGLDANHPLPIGLSVE 404


>gi|223041887|ref|ZP_03612073.1| membrane-fusion protein [Actinobacillus minor 202]
 gi|208435928|gb|ACI28437.1| membrane-fusion protein [Actinobacillus minor 202]
          Length = 353

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 56/407 (13%), Positives = 120/407 (29%), Gaps = 86/407 (21%)

Query: 19  RMTLLSIIGIIGLITW---SILLPI-EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            + LL +  I G + W        + E   S +G +  +   V++ + ++G +++  V+ 
Sbjct: 5   LIALLVLAAIGGGVYWKQTQSQAKLPEGIASVNGRLTVD--RVDVATLYAGRVEEMLVKE 62

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +   L      +    ++     I                               
Sbjct: 63  GEDVEKNQALARLSSSQIESQVNATSAQI------------------------------- 91

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                + +    +         + +V R+      + + + + +L+L+N           
Sbjct: 92  -----EAMQAQVAQAKAQKQRALETVSRANAEINAQQQQLSMAKLELDNA---------- 136

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
                   K L   N +S ++L +++     +    +  I   K           +A+  
Sbjct: 137 --------KKLRRDNLISASELERRQANYKVA----QSAIDTAKAARAEAQATVSQADAT 184

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            +     + R     Q             +   E   I SP++G +   Q     N    
Sbjct: 185 ISQAQAMVERAKADAQN-----------AQSQNEDMLIRSPLSGRV-EYQLADVGNVLGV 232

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              ++ I+      YI   +   Q   VK G  A V         E  F A +  I    
Sbjct: 233 GGKVVSILDLDD-VYINVFLPSYQANQVKIGDEARVIVDG----VEAVFPAKVSYISSQA 287

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                S +    +T+  +++ L+I +     N    + G  A     
Sbjct: 288 QFTPKSVETAEERTKMMFKIKLQIPEEIVKQNPAFFKGGMTAMGYVK 334


>gi|147677852|ref|YP_001212067.1| membrane-fusion protein [Pelotomaculum thermopropionicum SI]
 gi|146273949|dbj|BAF59698.1| membrane-fusion protein [Pelotomaculum thermopropionicum SI]
          Length = 325

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 54/401 (13%), Positives = 126/401 (31%), Gaps = 87/401 (21%)

Query: 18  KRMTLLSIIGIIGLITWSILLPI----EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           +   +L ++ +     W            ++ ++G I      VE+++  SG ++K  V 
Sbjct: 4   RIAGMLLVVVLGAAAYWGYFSYTGGAKASALQATGTIEATQ--VELRAKLSGTLQKLSVN 61

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +G Q+ +   +                  I      +  E+ AL  L  +  + +    +
Sbjct: 62  SGDQVKKDQVV----------------GQIYRSDLIVQKERDALGVLKARAQLADLVSGA 105

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           RE+++                                         + E   S  +    
Sbjct: 106 REQEI----------------------------------------KEAEIAVSTAQINYD 125

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              +D      LF++ A+S++++ + E  + +S  +L         +L        EA  
Sbjct: 126 RAGEDYNRAMALFQEKAISESEMEKAEAALKQSLNQLESAKARLSLLLAGSRPEQVEA-- 183

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                           +      ++ L   E   E   I+ PI GT++  ++F    Y Q
Sbjct: 184 ---------------ARAELERSIAVLKASEAMLEDTKIICPIDGTVLT-RNFEEGEYVQ 227

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-P 372
               +  +   +   +I+  +    +  ++ G            +     + I  + +  
Sbjct: 228 AGASVATVANLND-MWIKVYIPTDDLPKIRLGQQVRFTVSGSPAVYTGIIEEIASRGEFT 286

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             + Q    +    Y V +++     ++    L+ G PA+V
Sbjct: 287 PKTIQTKKERANIVYAVKIRV-----NNEGGVLKPGMPADV 322


>gi|238028561|ref|YP_002912792.1| Multidrug resistance efflux pump [Burkholderia glumae BGR1]
 gi|237877755|gb|ACR30088.1| Multidrug resistance efflux pump [Burkholderia glumae BGR1]
          Length = 380

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/290 (10%), Positives = 76/290 (26%), Gaps = 28/290 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    + +    +     + +    +      +     N    + ++ +    L     
Sbjct: 105 LVRLDVRQYQVALQQARATVDARRADIARAEADIAQQRANLEQAQAQARVSSINLHHASD 164

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +      L    A ++  +        ++   L  N          I             
Sbjct: 165 EYARYAPLAATGAETRERIADLRNTRDQAQATLAANTASIAAARTQIAAS---------- 214

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                +  L+Q +       +     +   +   + S + G +  +++     Y Q    
Sbjct: 215 -----TAQLQQARAQLEAAQASAAQSQLDLDNTVVRSTLDGRV-GDRTVRVGQYVQPGTR 268

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP----- 372
           L+ +VP   L  + A     Q+  ++ G   T+           +    +E   P     
Sbjct: 269 LLTVVPVQSLYLV-ANFKETQLGRMRPGQPVTLHVDALPGR---ELHGRVESFAPGTGAQ 324

Query: 373 ---IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              +  +      T+    V ++I           L  G    V    ++
Sbjct: 325 FALLPPENATGNFTKIVQRVPVRIHVDTDDQARRVLLPGLSVTVDVDTRD 374



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/140 (8%), Positives = 38/140 (27%), Gaps = 2/140 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V +   +  G PL+  +  +    +   + ++   R   D  ++  D    +
Sbjct: 85  SGYVTDVYVGDNQPVKAGAPLVRLDVRQYQVALQQARATVDARRA--DIARAEADIAQQR 142

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++ +   ++R   +                   +     +                   
Sbjct: 143 ANLEQAQAQARVSSINLHHASDEYARYAPLAATGAETRERIADLRNTRDQAQATLAANTA 202

Query: 184 KSSLLRALLSSHQKDLTMMK 203
             +  R  +++    L   +
Sbjct: 203 SIAAARTQIAASTAQLQQAR 222


>gi|223985483|ref|ZP_03635542.1| hypothetical protein HOLDEFILI_02848 [Holdemania filiformis DSM
           12042]
 gi|223962572|gb|EEF67025.1| hypothetical protein HOLDEFILI_02848 [Holdemania filiformis DSM
           12042]
          Length = 556

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 62/387 (16%), Positives = 123/387 (31%), Gaps = 32/387 (8%)

Query: 40  IEISVSSSGEILNED--NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE----DIETT 93
           +  S+S +G + +    NV   +S     +K   V+ G  +  G  +   +    D    
Sbjct: 60  LNNSISLTGTVESASVSNVTTNQSLA---VKSIPVQVGDWVEAGDIICVLDTDEIDKNIE 116

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV- 152
             ++  + +I N +  + + +  L +  +  D        +E  +      Y S  S V 
Sbjct: 117 KTLESLQENIDNAKDSLASAEENLTWAQSDADSAWNTMAEKESAMNSAKTAYESARSSVD 176

Query: 153 -FNYGISSVYRSLKMKLTRMRSIY--LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            F   +     + +  +         LN    +   + L     +        K     +
Sbjct: 177 AFQANVDQAQAAYQSAVEAENQALSALNSAISDGTCTGLEDTACAAGTAYNDAKQ-ASAD 235

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQ 268
           A S+ D  QQ+    +S +                N      N    N    +   +  +
Sbjct: 236 AKSKADSAQQDLKSAQSAMNYDTLAAAYNTAQSAYNAALTAWNTARNNRDSWQTKVEDAK 295

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
              T A     L  L + +E  T+ +  AG +      +  + A  +  +  I   +   
Sbjct: 296 EAVTKASSSDTLDDLYEKKENCTLTAETAGKVTAINV-TVGSMATNNTTIATIQ-DTDAL 353

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            I   +   +IQ+V+ G TA +         E + +  + +I P+ S Q+         E
Sbjct: 354 KITVTIPEYEIQNVELGMTAKITTDA----TEGEIEGTLTQISPVASSQNGGFSA----E 405

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLF 415
           V +   +         L  G  A V  
Sbjct: 406 VTVTTPNSG-------LYVGINATVEI 425


>gi|241205941|ref|YP_002977037.1| hypothetical protein Rleg_3250 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859831|gb|ACS57498.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 337

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 41/359 (11%), Positives = 96/359 (26%), Gaps = 88/359 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +   + G  +  GT L   +       +   + ++  L+  +D  K+        
Sbjct: 56  SGRLAELHADEGDLVKTGTVLAKLDAAPYEFAVRSGEANVAALQATLDKLKAG------- 108

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                     R  ++      Y  + + + N  ++                         
Sbjct: 109 ---------PRPTEIAQARAAYDESIADLRNANLA------------------------- 134

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                              + L  +  +S+  L+Q       +           K +L  
Sbjct: 135 ---------------YDRARQLRPQGTISEASLDQATAARAMAAARSDSANEALKLLLEG 179

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                                D+           + L     + +   + +P  G ++  
Sbjct: 180 SR-----------------VEDIAAADAQLKAAEATLASARTSLDDTELRAPNDGVMLS- 221

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +   +      +  +  ++  ++  ++R  V    +  +  G    V         +K +
Sbjct: 222 RVRENGAIVSPADTVF-VLSLTEPVWVRTYVAEPDLGLIHPGMKVAV---TSDTAPDKPY 277

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +  I  I P+      S +   L+T   Y + + I          +LR G P  V F  
Sbjct: 278 EGTIGFISPVAEFTPKSVETPELRTDLVYRLRIVIDKPGP-----DLRQGMPVTVRFPT 331


>gi|227354860|ref|ZP_03839276.1| multidrug resistance efflux pump [Proteus mirabilis ATCC 29906]
 gi|227165063|gb|EEI49897.1| multidrug resistance efflux pump [Proteus mirabilis ATCC 29906]
          Length = 356

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 40/334 (11%), Positives = 104/334 (31%), Gaps = 28/334 (8%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                +      ++      KS +    ++ +  +     R E + +   K      +  
Sbjct: 32  SDARYQTTDNAYIKADSTILKSRMTGFISQINKEDYQVVKRGEVIAEINKKEQILNRQAA 91

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L      ++   LN   L N+       +   ++   + K+L    A++Q
Sbjct: 92  LAEYQKAQLALDNLTEEIKEYQLNIEKLANRYQASVIDVIQAKRSPMLRKDLINSGAITQ 151

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +    +  + +         +E     + +  L  +  +  A       +D+ Q Q   
Sbjct: 152 QNYLDAQSDLQRLMKLQSAAKNEWDQAKQALVLLKSQEKIRLAQ------KDIAQTQYQ- 204

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                     E      TI +P    +   +     +       ++ + P + +  I A 
Sbjct: 205 --------QAETELSYATIKAPFDAQLNKIKVN-IGSLVTAGSEIVTLTPINNVYII-AN 254

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD----NNLQTQEYYEV 389
           +   QI+ V+   +  ++   +       F   +  I    S +      +  +  + +V
Sbjct: 255 LKETQIKKVQPEQSVAIKVDAFP---TDVFSGKVRYIGAQSSGESALIPADNASGNFTKV 311

Query: 390 I----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +    + IT  + + +  +LR G   +V    ++
Sbjct: 312 VQRIPVYITLNSDNRHLAKLRAGMSVQVKIDTES 345


>gi|198284563|ref|YP_002220884.1| secretion protein HlyD family protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218666433|ref|YP_002427231.1| secretion protein, HlyD family [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198249084|gb|ACH84677.1| secretion protein HlyD family protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218518646|gb|ACK79232.1| secretion protein, HlyD family [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 345

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 106/338 (31%), Gaps = 52/338 (15%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           + I+ ++   D     LD    + D ++K      + L D               G+++ 
Sbjct: 43  IDIRQVQAAFDDNGRLLDLRVQEGDRVKKG-----QLLADLDPVRFQDAVDKDAAGMAAQ 97

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L   L   R   +       +++  +A LS+ +      + L  +  V +  L+   
Sbjct: 98  EQVLARLLAGSRPEEIAEAR--AEAAAAQATLSNAEITWQRQQALAARQYVPKQSLDNAA 155

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             +  +   L          ++   +                  D+   ++    + + L
Sbjct: 156 AALKTARANLDRAQQALTLAIKGPRK-----------------EDIAAARQQLQADKAGL 198

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
           ++  +      + +P  G +   +     +      P+  +       ++RA +  K + 
Sbjct: 199 SLARRELTDTRLYAPEDGVVQD-RILEPGDMVSPQTPVFTLA-LDNPVWVRAYLPEKALG 256

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITD 395
            V+ G  AT+    +     K F   +  I P       + Q   L+T+  Y V +    
Sbjct: 257 QVRLGMKATISSDSFP---GKSFPGWVGFISPTAEFTPKTVQTTELRTELVYRVRV---- 309

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDN 433
               +    LR G P  V               P+TDN
Sbjct: 310 -YACNPQHRLRLGMPVTVHI-------------PLTDN 333


>gi|251772388|gb|EES52955.1| Secretion protein HlyD [Leptospirillum ferrodiazotrophum]
          Length = 378

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 64/207 (30%), Gaps = 17/207 (8%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              Q      +  ++   I   +  L    +L     +  + Y  +    L  +  +   
Sbjct: 96  YQAQVAQAESNLSKISTKIALDRIQLSRDKDLLAHHIIARSTYDSD-QAQLMMDAASKRQ 154

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP---LMKIVPHSKLTYIRA 332
             + L + +      TI SPI G ++  +          +     L  I    ++  +  
Sbjct: 155 LEAALNLAKTDLSYTTIRSPIDGVVISRKV-QIGQTVTSAFKTPRLFTIAHDLRMMRLDT 213

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +V+   I  ++ G   T R P Y +     F   +     ++      +     Y+V+  
Sbjct: 214 RVSEADIGSIRPGQAVTFRVPAYPER---LFTGSVT----VVRDHPRTVSHVVTYDVLST 266

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +      + +  L+ G  A V      
Sbjct: 267 VP-----NPDTALKPGMTATVTIHTGE 288



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 64/167 (38%), Gaps = 4/167 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ +V+++G +    N V + +  SGII K  V+  S + +G  L   +       +   
Sbjct: 45  LKKTVTATGRLK-ALNTVHVGAQVSGIIMKINVDFNSHVRKGEVLAQIDPAIYQAQVAQA 103

Query: 100 KVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + ++  +   I  ++  L     L   + +    ++S + QL+          + +    
Sbjct: 104 ESNLSKISTKIALDRIQLSRDKDLLAHHIIARSTYDSDQAQLMMDAASKRQLEAALNLAK 163

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               Y +++  +  +      ++     S+     L +   DL MM+
Sbjct: 164 TDLSYTTIRSPIDGVVISRKVQIGQTVTSAFKTPRLFTIAHDLRMMR 210


>gi|281420336|ref|ZP_06251335.1| multidrug resistance protein A [Prevotella copri DSM 18205]
 gi|281405638|gb|EFB36318.1| multidrug resistance protein A [Prevotella copri DSM 18205]
          Length = 370

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 105/360 (29%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I K       ++ +G  LL  +D          ++ +      +   K+  + +N  
Sbjct: 81  SGYIAKVCFREHQEVHKGDTLLVLDD-------REYRIRLMEAEAALKDAKAGANVINAT 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               E +                                                   + 
Sbjct: 134 EQTTETSASI-----------------------------------------------YQA 146

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               +   L+   KD    +NL EK A +   L Q E     +  +L     +Q    + 
Sbjct: 147 SIDEINVRLAKLAKDCERYRNLVEKKAATPIQLEQLEVEYAATRKKLEGVKKQQAAAYKG 206

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +NE+        A+            +   A EM+KL           +++P  G  +  
Sbjct: 207 VNEVTTRKQNVAASI----------ERAEAAVEMAKLN-----LSYCVVVAPCDGK-LGR 250

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +S            +  I+P +    I A     QI+++  G    +     ++   K+F
Sbjct: 251 RSIEEGQMVNAGTTITYIIPTNNKWVI-ANYKETQIENLYVGQKVRMTVDAISN---KEF 306

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +  +  I           P  +   N ++ Q+   V +   +L+  DN   L  G    V
Sbjct: 307 EGTVTAISGATGSKYSLVPTDNSAGNFVKIQQRVPVRIDFNNLSKEDNE-HLAAGMMVVV 365


>gi|224824195|ref|ZP_03697303.1| secretion protein HlyD family protein [Lutiella nitroferrum 2002]
 gi|224603614|gb|EEG09789.1| secretion protein HlyD family protein [Lutiella nitroferrum 2002]
          Length = 379

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 50/421 (11%), Positives = 127/421 (30%), Gaps = 64/421 (15%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSI---LLPIEISVSSSGEILNEDNVVEIKS 61
               L +   A+ ++   L++ G + L   +       +     ++        + ++  
Sbjct: 7   ATAPLPQIDNAAKRKKLFLALGGAVALSAAAYGAYWTLVASHHVTTDNAYVAAEIAQVTP 66

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             S  ++  +V +   + +G  L+  +D +        +++++     +   +  +    
Sbjct: 67  SISANVRAVKVVDTQAVKRGDVLVELDDTDA-------RLALEQAEAELARAERKVKGYL 119

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              D L+    +R+ +LL                                          
Sbjct: 120 ASDDGLQAQVSARDAELLRA---------------------------------------- 139

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + + S  ++ L   + DL   + L +  +VS  +L   +     +         +     
Sbjct: 140 KAQLSSAQSDLERAKIDLERRQALAKSGSVSGEELTHAKTAYDTAKS--ALEAAKAALAQ 197

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
              N+L  + +L+    L   +          A   +K        E+  I +PI G + 
Sbjct: 198 AGANKLAAQGSLKANQTL--TANTTVDTNPEVALARAKRNQARVDLERTVIRAPIDGVVA 255

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-- 359
             Q        Q    LM +VP  +  ++ A     Q++ V+ G   T+    Y      
Sbjct: 256 KRQV-QVGQRIQSGAQLMSVVPL-QQVHVDANFKEVQLEKVRVGQPVTLHSDIYGSDVVY 313

Query: 360 ------EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                           + P  +   N ++  +   + +++       + +++     A V
Sbjct: 314 HGKVVGFSGGSGSAFSLIPAQNATGNWIKVVQRLPLRIELDPAELKVHPLQVGLSMTATV 373

Query: 414 L 414
            
Sbjct: 374 D 374


>gi|15892250|ref|NP_359964.1| multidrug resistance protein A [Rickettsia conorii str. Malish 7]
 gi|15619388|gb|AAL02865.1| multidrug resistance protein A [Rickettsia conorii str. Malish 7]
          Length = 355

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 88/263 (33%), Gaps = 11/263 (4%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L      + +   N   +E K S+ +  L    + L + K  F+  A     + +  +  
Sbjct: 99  LAALEASIEACIKNIEIIEQKISIGQISLEQAAEKLKLNKISFDIVATDFMRVQELNKAK 158

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           + S+  L ++ +  +       +   + ++    +L+ +  +    Q    +      ++
Sbjct: 159 FASSKTLDDSKNAYQKAKTDYKQAQLDLDIS-KQHLQLLELEKAAEQEKLKELTENKKVI 217

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            ++ +   +++ + G I  N S    NY    + L  IV      YI+A     QIQ  K
Sbjct: 218 LRSLQNTKLIAMVPG-IFGNSSLEVGNYIVPGRALFSIV-QDNTMYIQANFKETQIQKFK 275

Query: 344 KGYTATVRFPHYAD-IREKKF----KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
            G    + F      +   K      A   K   I         T+    V + I    F
Sbjct: 276 SGMKVKIEFDALPKKVIYGKIRNIAPATGSKFSLIPPDHATGNFTKSVQRVPVLID---F 332

Query: 399 SDNNIELRNGFPAEVLFTAKNTT 421
              N  L  G  A V      +T
Sbjct: 333 ESPNANLVPGMSAIVSIRTDQST 355


>gi|301060349|ref|ZP_07201212.1| efflux transporter, RND family, MFP subunit [delta proteobacterium
           NaphS2]
 gi|300445545|gb|EFK09447.1| efflux transporter, RND family, MFP subunit [delta proteobacterium
           NaphS2]
          Length = 415

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 65/457 (14%), Positives = 136/457 (29%), Gaps = 116/457 (25%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLIT-------W---------------SILLPIEISVSSS 47
           K + P   KR+  L I G+I  +        W               +    +  +V ++
Sbjct: 3   KNDSPKRGKRLFWLLISGLIVAMAVVFVCRPWRANTKKALERPATARASFEDVVSTVLAT 62

Query: 48  GEILNE-DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           G+++ +    V + +  SG ++K  V  G  +++G  +   E           K  ++ +
Sbjct: 63  GKVMPQVGAEVNVGARISGRLEKLYVNVGDSVVKGQVIAEIE-----------KEDLEAM 111

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
               + E +                                    +    ++++      
Sbjct: 112 MAVAEAEVT------------------------------------LIQVRLAALKTEGPQ 135

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           ++ +           E + +  +A     +  L   + LF K+ +S+ D  +        
Sbjct: 136 EIAQA----------EAEMAEQKARFEFVKCKLGRDEQLFGKSLISKEDWEE-------- 177

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
                         +           LE A    E   ++ Q     +   + L   +  
Sbjct: 178 --------ASSDFKMARARYEVSRRGLELARTRYE--EEMRQLAAELSRARASLRNAQVK 227

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
                I +P++G +V + S                + IV   K   + A V    I  +K
Sbjct: 228 LSYAVIRAPLSG-VVGSVSTREGETVAAGLSAPTFVTIV-DLKRLQLDAYVDEVDIGRIK 285

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G         + D    +F   +  I P    QDN +     Y+ I+ I          
Sbjct: 286 AGQKGVFSVDAFPDR---EFYGRVTAIYPQAVIQDNVIT----YDCIIHIETPYAGL--- 335

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
            LR    A V+   +N      ++ P++    +  +R
Sbjct: 336 -LRPQMTASVMIEVENRE--NVLVLPVSAVKRRAGKR 369


>gi|316931937|ref|YP_004106919.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315599651|gb|ADU42186.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 388

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 109/312 (34%), Gaps = 32/312 (10%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +E Q ++   +        F   ++     L    T   ++  N     +   L+ A ++
Sbjct: 93  KEGQHVEPGDELFQIDPVPFRLAVAQAQAKLADAKTSHANLVANVKLYGHTVELVNAGIA 152

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q+D+    +L +  A SQ DL+     +  +  +L+    +Q      +N+L  +  L
Sbjct: 153 LKQRDVERKTSLVQSRAGSQLDLDNSTAALVTAQAQLQLVKQQQSTA---LNQLLGDPEL 209

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               +              +A   + L   E+     T+ +P+ GT     +     +  
Sbjct: 210 PLEKF------------PAYAQAKAALEDAERNLRLATVRAPMRGTATQVDNIQLGRFVA 257

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              P+  ++  +   ++ A        +V  G T T+    + D     FK  +  + P 
Sbjct: 258 AGTPVFSVI-DTSQPWVDANPKESDFTYVAVGQTVTLDVDAFPDH---PFKGRVTSLSPG 313

Query: 374 ISQQ----DNNLQTQEYYEVILKIT-DLAFSDNN---IELRNGFPAEVLFTAKNTTLAQE 425
              Q         T  + +V+ ++   +AF+DN+    +L+ G    V    ++      
Sbjct: 314 TGAQFAVLPPQNATGNFVKVVQRVPLRIAFNDNDPMIKKLKAGMSVNVAIDTRHRRSLAG 373

Query: 426 IIHPITDNWPKI 437
           ++      + + 
Sbjct: 374 LL-----GFGRA 380


>gi|253568628|ref|ZP_04846039.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251842701|gb|EES70781.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 304

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 54/289 (18%), Positives = 105/289 (36%), Gaps = 39/289 (13%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++      +  QL    G       +V       +Y         M+S+   R DL  + 
Sbjct: 39  IVSAEAAGKLLQLEVEEGTRLKAGEEVGLVDTVQLYLKKLQLEASMKSVESQRPDLAKQI 98

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  +  +++ Q++   ++NL    A +Q  L+  +  V       R+ I ++ ++++  N
Sbjct: 99  AATKQQITTAQREKKRVENLLAAGAANQKQLDDWDAQVTLLQ---RQLIAQESSLMKSTN 155

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L ++ N       +                      +E    +  I SPI GT++  + 
Sbjct: 156 SLTEQGNSVGIQVAQ----------------------VEDQLSKCHIQSPIEGTVL-VKY 192

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
             +   A   +PL K V      Y+RA VT +Q+  VK G   TV +  Y +  +K +  
Sbjct: 193 AEAGELASVGKPLFK-VGEVDRMYLRAYVTSEQLSQVKLGDEVTV-YSDYGNSEQKAYPG 250

Query: 366 IIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           ++  I              N +    Y V + +       N+  L+ G 
Sbjct: 251 VVTWISDRSEFTPKTILTKNERANLVYAVKIAV------KNDGSLKIGM 293



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 84/232 (36%), Gaps = 27/232 (11%)

Query: 26  IGIIGLITWSILLPIEISVS---SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           IGI G+  W +L           ++G     +  V + +  +G + + +VE G+++  G 
Sbjct: 7   IGIYGMAVW-LLSACGNGTPDYDATGTFEATE--VIVSAEAAGKLLQLEVEEGTRLKAGE 63

Query: 83  PLLTFEDIE----------TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            +   + ++          +   ++ ++  +         + +       + + L  A  
Sbjct: 64  EVGLVDTVQLYLKKLQLEASMKSVESQRPDLAKQIAATKQQITTAQREKKRVENLLAAGA 123

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL- 191
           + ++QL D+  +      ++     SS+ +S      +  S+ +    +E++ S      
Sbjct: 124 ANQKQLDDWDAQVTLLQRQLI-AQESSLMKSTNSLTEQGNSVGIQVAQVEDQLSKCHIQS 182

Query: 192 ---------LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                     +   +  ++ K LF+   V +  L         S ++L + +
Sbjct: 183 PIEGTVLVKYAEAGELASVGKPLFKVGEVDRMYLRAYVTSEQLSQVKLGDEV 234


>gi|238894499|ref|YP_002919233.1| putative multidrug resistance efflux pump [Klebsiella pneumoniae
           NTUH-K2044]
 gi|330015031|ref|ZP_08308061.1| auxiliary transport protein, membrane fusion protein family protein
           [Klebsiella sp. MS 92-3]
 gi|238546815|dbj|BAH63166.1| putative multidrug resistance efflux pump [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|328532119|gb|EGF58924.1| auxiliary transport protein, membrane fusion protein family protein
           [Klebsiella sp. MS 92-3]
          Length = 361

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 87/301 (28%), Gaps = 29/301 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V + A     E L     + +          ++    +L+  L + +S        E   
Sbjct: 77  VKDFAIVQPGEVLFQIDDRIYKQRVHQAQATLAMKEAALRNNLQQRKSAEATIAKNEAAL 136

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              RA     Q DL  ++ L    ++S     ++      S  +   +I + K  L    
Sbjct: 137 QNARAQNLKIQADLKRIQQLTADGSLS----IRERDSARASAAQGAADIEQAKAALEMSR 192

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +  +   +   +   ++           A   + L + +   +   I++P  G +     
Sbjct: 193 QDRESTIVNRDSLEADV-----------ASAKAALELAQIDLQNTQIIAPTGGQLGQISV 241

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA--------D 357
                Y      L  +VP        A +   Q+  V+ G   T                
Sbjct: 242 R-LGAYVSAGTHLTSLVPPQHWVI--ANLKETQLAEVRVGQPVTFTVDALNGETFHGKVQ 298

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                       I P  +  +     Q    + ++IT     +N+  LR G   +V    
Sbjct: 299 SISPATGVEFSAISPDNATGNFVKIAQ---RIPVRITVNDGQNNSERLRPGMSVQVTIDT 355

Query: 418 K 418
           +
Sbjct: 356 R 356



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 52/194 (26%), Gaps = 10/194 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                  I    +G I    V++ + +  G  L   +D      +   + ++      + 
Sbjct: 57  VRGQTTFISPQVNGYITAVNVKDFAIVQPGEVLFQIDDRIYKQRVHQAQATLAMKEAALR 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                           E A ++   Q L              +  +S   R      +  
Sbjct: 117 NNLQQRKSAEATIAKNEAALQNARAQNLKIQADLKRIQQLTADGSLSIRERD-----SAR 171

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            S      D+E   + L       +  +    +L    A ++  L      + +  L+  
Sbjct: 172 ASAAQGAADIEQAKAALEMSRQDRESTIVNRDSLEADVASAKAAL-----ELAQIDLQNT 226

Query: 232 ENIHEQKNMLRHIN 245
           + I      L  I+
Sbjct: 227 QIIAPTGGQLGQIS 240


>gi|45440811|ref|NP_992350.1| hypothetical protein YP_0975 [Yersinia pestis biovar Microtus str.
           91001]
 gi|108807089|ref|YP_651005.1| hypothetical protein YPA_1093 [Yersinia pestis Antiqua]
 gi|108812976|ref|YP_648743.1| hypothetical protein YPN_2816 [Yersinia pestis Nepal516]
 gi|153948790|ref|YP_001401775.1| hypothetical protein YpsIP31758_2812 [Yersinia pseudotuberculosis
           IP 31758]
 gi|166211730|ref|ZP_02237765.1| transport protein, MFP family [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167400439|ref|ZP_02305952.1| transport protein, MFP family [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167424177|ref|ZP_02315930.1| transport protein, MFP family [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|170025122|ref|YP_001721627.1| hypothetical protein YPK_2900 [Yersinia pseudotuberculosis YPIII]
 gi|229894066|ref|ZP_04509252.1| Hypothetical UPF0194 membrane protein ybhG [Yersinia pestis
           Pestoides A]
 gi|229903413|ref|ZP_04518526.1| Hypothetical UPF0194 membrane protein ybhG [Yersinia pestis
           Nepal516]
 gi|294503184|ref|YP_003567246.1| hypothetical protein YPZ3_1074 [Yersinia pestis Z176003]
 gi|47117903|sp|Q93AA7|YBHG_YERPE RecName: Full=UPF0194 membrane protein YP_0975; Flags: Precursor
 gi|123245876|sp|Q1C912|Y1093_YERPA RecName: Full=UPF0194 membrane protein YPA_1093; Flags: Precursor
 gi|123373023|sp|Q1CFT7|Y2816_YERPN RecName: Full=UPF0194 membrane protein YPN_2816; Flags: Precursor
 gi|166988521|sp|A7FKJ7|Y2812_YERP3 RecName: Full=UPF0194 membrane protein YpsIP31758_2812; Flags:
           Precursor
 gi|226701558|sp|B1JSP3|Y2900_YERPY RecName: Full=UPF0194 membrane protein YPK_2900; Flags: Precursor
 gi|45435669|gb|AAS61227.1| Membrane-fusion protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|108776624|gb|ABG19143.1| membrane-fusion protein [Yersinia pestis Nepal516]
 gi|108779002|gb|ABG13060.1| membrane-fusion protein [Yersinia pestis Antiqua]
 gi|152960285|gb|ABS47746.1| transport protein, MFP family [Yersinia pseudotuberculosis IP
           31758]
 gi|166207501|gb|EDR51981.1| transport protein, MFP family [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167050388|gb|EDR61796.1| transport protein, MFP family [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057026|gb|EDR66789.1| transport protein, MFP family [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169751656|gb|ACA69174.1| secretion protein HlyD family protein [Yersinia pseudotuberculosis
           YPIII]
 gi|229679183|gb|EEO75286.1| Hypothetical UPF0194 membrane protein ybhG [Yersinia pestis
           Nepal516]
 gi|229703951|gb|EEO90964.1| Hypothetical UPF0194 membrane protein ybhG [Yersinia pestis
           Pestoides A]
 gi|262361221|gb|ACY57942.1| hypothetical protein YPD4_1033 [Yersinia pestis D106004]
 gi|294353643|gb|ADE63984.1| hypothetical protein YPZ3_1074 [Yersinia pestis Z176003]
 gi|320014323|gb|ADV97894.1| Hypothetical UPF0194 membrane protein ybhG [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 328

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 97/255 (38%), Gaps = 21/255 (8%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS---QNDLNQQERIVY 224
           L  ++    N    + + +LL+A     ++++  +++   +   +    ++  ++++ ++
Sbjct: 81  LNALKQAQANVQSAQAQLALLKAGY--REEEIAQVRSEVAQRQAAFDYADNFLKRQQGLW 138

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTIL 283
            S       +   +            A  + A +L     +++ Q +   A   ++L   
Sbjct: 139 ASKAVSANELENARTARNQAQANLQAAKDKLAQFLSGNRPQEIAQAEANLAQTEAELAQA 198

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +   +   +L+P AGT++  ++         S  +   V  +   ++RA V+ + +    
Sbjct: 199 QLNLQDTILLAPSAGTVLT-RAVEPGTILSASNTVFT-VSLTDPVWVRAYVSERHLGQAI 256

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAF 398
            G    V F       +K +   I  + P       + +  +L+T   Y + + ITD   
Sbjct: 257 PGSEVEV-FT--DGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDLVYRLRIIITDA-- 311

Query: 399 SDNNIELRNGFPAEV 413
              +  LR G P  V
Sbjct: 312 ---DESLRQGMPVTV 323


>gi|94967339|ref|YP_589387.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
 gi|94549389|gb|ABF39313.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
          Length = 421

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 102/335 (30%), Gaps = 42/335 (12%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                    +     K+ V   A   R + L     +  S  ++    G      S K  
Sbjct: 54  LQQAAITPKVSAPVRKFFVQRGARVHRGQLLARLESRDVSAAAEDARGGFQQAESSYKTA 113

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
                     + +L+ + +  +  L   QK     + LF++ A+   DL+     + ++ 
Sbjct: 114 TQAAVPEEYQKAELDYEQA--KTNLDVQQKIFDARQKLFQEGAIPGRDLDTARLNLVQAQ 171

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +  E     ++      E                   +   +        KL + E + 
Sbjct: 172 SQFNEASKHLESAKAVTREQ-----------------SMRNAEGQLQSARGKLQVAEASV 214

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               I SPI G +     F          PL+ ++  +     +A +   + Q +K G  
Sbjct: 215 SYTEIRSPIDGVVTDRPFF-DGEMTTPGTPLITVM-ETSSLLAKAHLPQAEAQQLKPGDD 272

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           ATV         EK     +  + P +      +      EV +K+      +    L+ 
Sbjct: 273 ATVTV----QGLEKPVPGKVTMVSPALDPGSTTV------EVWVKV-----ENKEGALKP 317

Query: 408 GFPAEVLFTAKNTTLAQEIIHP----ITDNWPKIF 438
           G  A V   A   TL   +  P    + D+  K F
Sbjct: 318 GTAARVAIAA--RTLKDALTIPSSAVLKDDSGKAF 350



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 58/152 (38%), Gaps = 15/152 (9%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT----------EKSA 116
           ++KF V+ G+++ +G  L   E  + +   +  +   +       T          +K+ 
Sbjct: 67  VRKFFVQRGARVHRGQLLARLESRDVSAAAEDARGGFQQAESSYKTATQAAVPEEYQKAE 126

Query: 117 LDFLNNK--YDVLEKAFESREEQLLD-FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           LD+   K   DV +K F++R++   +  +       +++      S +      L   ++
Sbjct: 127 LDYEQAKTNLDVQQKIFDARQKLFQEGAIPGRDLDTARLNLVQAQSQFNEASKHLESAKA 186

Query: 174 IYLNR--LDLENKSSLLRALLSSHQKDLTMMK 203
           +   +   + E +    R  L   +  ++  +
Sbjct: 187 VTREQSMRNAEGQLQSARGKLQVAEASVSYTE 218


>gi|226225936|ref|YP_002760042.1| multidrug resistance protein [Gemmatimonas aurantiaca T-27]
 gi|226089127|dbj|BAH37572.1| multidrug resistance protein [Gemmatimonas aurantiaca T-27]
          Length = 345

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 76/250 (30%), Gaps = 21/250 (8%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
             +T +R+    R     +    +A L   Q DLT  K L  K  +S   L+  +     
Sbjct: 106 QAVTVVRTASSQRDVGSAQVDAAKAQLIRAQADLTRAKELAGKQIISMAQLDGAQATFDA 165

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +T  L     +       I                     +   Q   A   +       
Sbjct: 166 ATANLEATQRQVLAATGSIANAQ---------------AGVRLAQARLAAAEAARDNAAL 210

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                T+ +P++G +   Q        Q  Q +M IV      ++ A +   Q+  ++ G
Sbjct: 211 QLSYATVEAPLSGIVSRKQV-ELGQLIQAGQAMMSIV-ADTGLFVTANMKETQLARLRVG 268

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDN 401
               +    Y    E + ++I        +    +  T  + +V+    ++I        
Sbjct: 269 QKVDLEIDAYEATAEGEVESIASATGAKFALLPPDNATGNFTKVVQRVPVRIRVTKDLGK 328

Query: 402 NIELRNGFPA 411
           +  LR G   
Sbjct: 329 DRPLRPGMSV 338


>gi|300864814|ref|ZP_07109664.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300337218|emb|CBN54812.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 466

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/378 (10%), Positives = 119/378 (31%), Gaps = 53/378 (14%)

Query: 43  SVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLIDL 98
           +V++ G +  +   + + +        I K  V+ G  +  G  +   +        ++ 
Sbjct: 57  TVTALGRLEPQGEAIALSASSSAEGNRIDKLLVKEGDWVKTGQTIAILDSRDRLLAALEQ 116

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  ++  +  + T K+     + +    E A    + +    +    +  +++     +
Sbjct: 117 AQQQVRVSQAKLATVKAGAK--SGEIQAQEAAIARLQAERRTDIEAAEAVLNRLEAERRT 174

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +                     E   + L+A L + + +    + L ++ A+S    + 
Sbjct: 175 DIEGQKAAIARIQAEKEGEIAGQEAAIARLKAELENAKTEAQRYEQLNQEGAISTQQRDS 234

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD--- 275
           ++  +  +  +L E       +     +  +EA  + +   +  +  +++ +        
Sbjct: 235 KQLTLETAQQKLNEARTNLTRIHSSRQQQLNEAEAKLSQIYQSRASQIDEAKAKLNQSQT 294

Query: 276 -EMSKLTILEKTREQKT--------------------------------ILSPIAGTIVY 302
            + +++   E   ++ +                                I +P    ++ 
Sbjct: 295 AQRAQIIEAEANLDRISEIRPTDIQTAEAEVSAAIATAKQAQANLDLAYIRAPKDAQVLK 354

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
             ++              IV   +    Y  A+V    I+ VK G  A +     +    
Sbjct: 355 IYTYPGEKVGNDG-----IVQLGQTHNMYAVAEVYESDIEGVKIGQKAKITSTSLS---- 405

Query: 361 KKFKAIIEKIDPIISQQD 378
            + +  +E+I   + +Q+
Sbjct: 406 GELQGNVEQIGLQVLKQN 423


>gi|157964312|ref|YP_001499136.1| multidrug resistance protein A [Rickettsia massiliae MTU5]
 gi|157844088|gb|ABV84589.1| Multidrug resistance protein A [Rickettsia massiliae MTU5]
          Length = 355

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 87/263 (33%), Gaps = 11/263 (4%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L      + +   N   +E K S+ +  L    + L + K  F+  A     + +  +  
Sbjct: 99  LAALEASIEACIKNIEIIEQKISIGQISLEQAAEKLKLNKISFDIVATDFIRVQELNKAK 158

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           + S+  L ++ +  +       +   + ++    +L+ +  +    Q    +      + 
Sbjct: 159 FASSKTLDDSKNAYQKAKTDYKQAQLDLDIS-KQHLQLLELEKAAEQEKLKELTENKKVT 217

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            ++ +   +++ + G I  N S    NY    + L  IV      YI+A     QIQ  K
Sbjct: 218 LRSLQNTKLIAMVPG-IFGNSSLEIGNYIVPGRALFSIV-QDNTMYIQANFKETQIQKFK 275

Query: 344 KGYTATVRFPHYAD-IREKKF----KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
            G    + F      +   K      A   K   I         T+    V + I    F
Sbjct: 276 SGMKVKIEFDALPKKVIYGKIRNIAPATGSKFSLIPPDHATGNFTKSVQRVPVLID---F 332

Query: 399 SDNNIELRNGFPAEVLFTAKNTT 421
              N  L  G  A V      +T
Sbjct: 333 ESPNANLVPGMSAIVSIRTDQST 355


>gi|51595556|ref|YP_069747.1| hypothetical protein YPTB1212 [Yersinia pseudotuberculosis IP
           32953]
 gi|186894612|ref|YP_001871724.1| hypothetical protein YPTS_1292 [Yersinia pseudotuberculosis PB1/+]
 gi|81640028|sp|Q66D37|Y1212_YERPS RecName: Full=UPF0194 membrane protein YPTB1212; Flags: Precursor
 gi|226695905|sp|B2K8W1|Y1292_YERPB RecName: Full=UPF0194 membrane protein YPTS_1292; Flags: Precursor
 gi|16611841|gb|AAL27384.1|AF426171_15 putative membrane protein [Yersinia pestis]
 gi|51588838|emb|CAH20452.1| putative HlyD family multidrug secretion protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|186697638|gb|ACC88267.1| secretion protein HlyD family protein [Yersinia pseudotuberculosis
           PB1/+]
          Length = 328

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 97/255 (38%), Gaps = 21/255 (8%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS---QNDLNQQERIVY 224
           L  ++    N    + + +LL+A     ++++  +++   +   +    ++  ++++ ++
Sbjct: 81  LNALKQAQANVQSAQAQLALLKAGY--REEEIAQVRSEVAQRQAAFDYADNFLKRQQGLW 138

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTIL 283
            S       +   +            A  + A +L     +++ Q +   A   ++L   
Sbjct: 139 ASKAVSANELENARTARNQARANLQAAKDKLAQFLSGNRPQEIAQAEANLAQTEAELAQA 198

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +   +   +L+P AGT++  ++         S  +   V  +   ++RA V+ + +    
Sbjct: 199 QLNLQDTILLAPSAGTVLT-RAVEPGTILSASNTVFT-VSLTDPVWVRAYVSERHLGQAI 256

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAF 398
            G    V F       +K +   I  + P       + +  +L+T   Y + + ITD   
Sbjct: 257 PGSEVEV-FT--DGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDLVYRLRIIITDA-- 311

Query: 399 SDNNIELRNGFPAEV 413
              +  LR G P  V
Sbjct: 312 ---DESLRQGMPVTV 323


>gi|310657765|ref|YP_003935486.1| RNS family efflux transporter MFP subunit [Clostridium sticklandii
           DSM 519]
 gi|308824543|emb|CBH20581.1| putative Efflux transporter, RND family, MFP subunit precursor
           [Clostridium sticklandii]
          Length = 461

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 60/383 (15%), Positives = 122/383 (31%), Gaps = 78/383 (20%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE S+S +G+I   D+     S    I+ +  V+ G  + +G  L   +D +    I+L 
Sbjct: 71  IEHSLSITGKIEGTDSAEISSSLNYEIV-QINVKEGDYVEKGQVLAVLDDKDLKQEINLS 129

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  ++                                                +   I S
Sbjct: 130 QKDLELAELQ-------------------------------------------YKENIDS 146

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             +      +   S+  ++++ +     L            + K LFE  A+ + +  Q 
Sbjct: 147 KSKLDTSTASANISVNQSQIEYDEAKRQLE-----------IKKALFESGAIPKEEYTQA 195

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E  V KS + L       +     + +  DE + + ++            ++    +  +
Sbjct: 196 EISVQKSEIALELAKDGLRKAKLDVQKTIDEQSPKASD------------KKALEIKREQ 243

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPK 337
           L   ++  E+  I SPI+GT+    +       Q S     + +V +     ++  ++  
Sbjct: 244 LNQKQQDLEKVYIKSPISGTVTRVNAR-LGRTPQASDDNKPLFVVENLSDLRMKVSISEF 302

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I  +K G  A +       +   K  A++  I P    ++     +    VIL I D  
Sbjct: 303 DIGSIKAGLGAEI--SA-DVLGSDKVNALVYNISPTGEPKEGGNSKEMVIPVILDIVDED 359

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
                  L  G  A      +  
Sbjct: 360 P-----RLIAGVTASAKIMIEQK 377


>gi|218132091|ref|ZP_03460895.1| hypothetical protein BACEGG_03718 [Bacteroides eggerthii DSM 20697]
 gi|217985741|gb|EEC52082.1| hypothetical protein BACEGG_03718 [Bacteroides eggerthii DSM 20697]
          Length = 363

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 55/360 (15%), Positives = 109/360 (30%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IKK       +I +G  LL  +D          K+ +      +   ++    +   
Sbjct: 75  SGYIKKIYFTEHQEIHKGDTLLVLDD-------REYKIRVMEAEAALKDAQAGATVIGAT 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +                                                     + 
Sbjct: 128 LQTTQTTASV-----------------------------------------------YDA 140

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             S +   L+  +KD    +NL ++NA +   L Q E     +  +L     +QK  L  
Sbjct: 141 SISEIEIRLAKLEKDRQRYQNLVQRNAATPIQLEQIETEYEATRKKLEATKRQQKAALSG 200

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +N               E+S   E  +       + L +         +++P  G  +  
Sbjct: 201 VN---------------EVSHRRESTEAAIQRATAALEMARLNLSYTVVVAPCDGK-LGR 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     +    Q +  I+P ++   + A     Q++++  G   +V     ++   K+F
Sbjct: 245 RALEEGQFITAGQTITYILPDTQKWIV-ANYKETQVENLHIGQKVSVTVDAISN---KEF 300

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
              I  I           P  +   N ++ Q+   V +  T+L+  DN  +L  G    V
Sbjct: 301 TGTITAISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTNLSKEDNE-KLAAGMMVIV 359


>gi|87125332|ref|ZP_01081178.1| hypothetical protein RS9917_07940 [Synechococcus sp. RS9917]
 gi|86167101|gb|EAQ68362.1| hypothetical protein RS9917_07940 [Synechococcus sp. RS9917]
          Length = 435

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 46/336 (13%), Positives = 99/336 (29%), Gaps = 63/336 (18%)

Query: 23  LSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LS+IG+  L   W++  P+   V+  G ++       I S   G I++  V  G  + +G
Sbjct: 23  LSLIGLWSLTGLWALFWPVPTEVTGRGVMIVPGGATLIDSRAEGQIRQLNVSVGDAVRRG 82

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L+  +       + L+K  ++ L                              Q+   
Sbjct: 83  DVLMVLDQPALEQQLQLQKKDLREL-----------------------------IQINAD 113

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           L +  +           +  R L  +  ++  +       +   + L            +
Sbjct: 114 LNRQDAIRLTDARLVRDTALRQLDREQAQLEQLQATYAQKQADFAHLA--------QREV 165

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +  L ++   + +   Q    +    +  +E ++    +   I+    +      N  +E
Sbjct: 166 VAPLAKEVVATSDRNTQLTVDLDNLAIRRKEVVNAYSKVQLAIDTEQQQRRFRIDNLRRE 225

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           I+                     K R Q  +++   GT++  Q        +  Q L  I
Sbjct: 226 IT-----------------VTEAKLRYQADLIAKRDGTVIDLQVI-QGQTVKPGQRLGTI 267

Query: 322 -------VPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
                     S      A   P   + ++ G    V
Sbjct: 268 SNTAAERTGQSPELQAVAYFHPADARRLQPGLGVEV 303


>gi|256420818|ref|YP_003121471.1| secretion protein HlyD family protein [Chitinophaga pinensis DSM
           2588]
 gi|256035726|gb|ACU59270.1| secretion protein HlyD family protein [Chitinophaga pinensis DSM
           2588]
          Length = 355

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 52/347 (14%), Positives = 121/347 (34%), Gaps = 30/347 (8%)

Query: 80  QGTPLLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            G  L+       + L +L+K        +  +I+   + +    ++ +  E     + +
Sbjct: 23  AGVILIALAIWGISTLFELRKYEETNDAQVEEYINPVTARVTGYISRINYEENQDVKKGD 82

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            LL      +    +  N  + +    +++  + + +   N    E + +  +A L   Q
Sbjct: 83  TLLIIDDSEYQLQQQEANAALLNAQAQVQVLESNVNTTAKNANVTEAQIAAAKAKLWKQQ 142

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++    + L++  + ++  L   E  +  +  + +  I+     +  IN++  +  +  A
Sbjct: 143 QEYDRYQKLYDAESATKQQLENVETALNVAKADYQTVINNYDAAVSKINDIKSQKAVLAA 202

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                        +R      +KL +         I +P  G +   ++       Q  Q
Sbjct: 203 EI----------ERRQAMLGRNKLDV-----SYTVIRAPYDGKM-GRRTIQEGQLIQAGQ 246

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  IV  +   +I A     Q+ H+  G TA +    +     K F   IE + P    
Sbjct: 247 TLAFIVNQATGKWIIANFKETQVSHMHIGQTADIEIDAFP---GKTFNGTIESLSPATGS 303

Query: 377 Q----DNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVLF 415
           +      +  +  + +++ +I       +N+     LR G  A V  
Sbjct: 304 RFSLLPPDNSSGNFVKIVQRIPVRIKLTSNVTETALLRAGMNATVAI 350



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 78/214 (36%), Gaps = 18/214 (8%)

Query: 10  KRNHPASLKRMT----LLSIIGIIGLITW--SILLPI---EISVSSSGEILNEDNVVEIK 60
           K NH  + + +T      + + +I L  W  S L  +   E +  +      E+ +  + 
Sbjct: 5   KNNHARTDRLITTITGWAAGVILIALAIWGISTLFELRKYEETNDAQ----VEEYINPVT 60

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +  +G I +   E    + +G  LL  +D E          ++ N +  +   +S ++  
Sbjct: 61  ARVTGYISRINYEENQDVKKGDTLLIIDDSEYQLQQQEANAALLNAQAQVQVLESNVNTT 120

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCS-----KVFNYGISSVYRSLKMKLTRMRSIY 175
               +V E    + + +L     +Y                + +V  +L +     +++ 
Sbjct: 121 AKNANVTEAQIAAAKAKLWKQQQEYDRYQKLYDAESATKQQLENVETALNVAKADYQTVI 180

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            N     +K + +++  +    ++   + +  +N
Sbjct: 181 NNYDAAVSKINDIKSQKAVLAAEIERRQAMLGRN 214


>gi|294012847|ref|YP_003546307.1| multidrug resistance protein A [Sphingobium japonicum UT26S]
 gi|292676177|dbj|BAI97695.1| multidrug resistance protein A [Sphingobium japonicum UT26S]
          Length = 383

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 47/358 (13%), Positives = 95/358 (26%), Gaps = 61/358 (17%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V +   + +G  L+  +       +   +  +   R       +    L  + +   
Sbjct: 79  EVLVTDTQAVKRGDILVKLDPTNARIAVAQAEADLAEARRRFRQAVATSGSLAAQVEARG 138

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                   QL      +                                           
Sbjct: 139 ADISQARAQLATAQADFDKARI-------------------------------------- 160

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                    DL   + L    AVS  +L        K+    +  +   K  +       
Sbjct: 161 ---------DLRRREALAPNGAVSGEELT----SARKAYAAAQAALDLAKAGVATAEATR 207

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A+ + A     +               +KL       ++  I +PI G +   +S   
Sbjct: 208 GAASGQLAANDALVRGSTIDTDPAVLAAKAKLENARLDLDRSVIRAPIDGVVTR-RSVQV 266

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA-----DIREKKF 363
                Q  P+M IVP     Y+ A    +Q++ VK G  ATV    Y        +   F
Sbjct: 267 GQRVAQGSPIMTIVPL-ARVYVDANFKERQLRRVKIGMPATVTSDLYGGGVVYHGKVVGF 325

Query: 364 KAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                    +I  Q+      +  +   V + +     +++ + +     AE+  + +
Sbjct: 326 SGGTGASMALIPAQNATGNWIKVVQRLPVRIALDPRELAEHPLRIGLSMEAEIDLSGE 383


>gi|50083972|ref|YP_045482.1| putative multidrug resistance efflux pump [Acinetobacter sp. ADP1]
 gi|49529948|emb|CAG67660.1| putative multidrug resistance efflux pump [Acinetobacter sp. ADP1]
          Length = 389

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 56/410 (13%), Positives = 120/410 (29%), Gaps = 84/410 (20%)

Query: 20  MTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           +    ++  IGLI W+  + P    +  +     +     + S  +G IK+  V++   +
Sbjct: 55  IMFFVLLVGIGLIMWAWRIGPFHTMIEQTDNSYVKGKTTVLSSQINGYIKEVLVKDFDDV 114

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            QG PLL  +       +   + ++   +  +                            
Sbjct: 115 KQGQPLLYIDATTYDQKVTQAESAVAQAQNTL---------------------------- 146

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                   +  ++      + +  +            L+   L     L  +  +S  + 
Sbjct: 147 --------ANQTQTIAQREADIIAAQAQVDQAQAEYQLSLDQLRRYQQLGDSGAASKSEQ 198

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
             +        A ++N+L   ++      +   E +   +     +N     A  +    
Sbjct: 199 DQIA-------ATAKNNLAALKKAKANVKVA-NEALKTAQVAEVGLNAQVTSAQAQ---- 246

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
                                L   + T+    I +P+ G  +   +     Y      L
Sbjct: 247 ---------------------LDQAKTTKNYSVITAPMDGQ-LGEVTPRIGQYVAAGSQL 284

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ- 377
           + ++P+       A     QI H+K G  AT         +   FK  IE+I P    + 
Sbjct: 285 LYLIPNQTWVI--ANFKETQIAHMKIGQPATFTVDALDHQK---FKGHIEQISPAAGSEF 339

Query: 378 ---DNNLQTQEYYEVILKIT-DLAFSDNN---IELRNGFPAEVLFTAKNT 420
                +  T  + +V+ +I+  +A   N      LR G          + 
Sbjct: 340 SVLKADNATGNFTKVVQRISVRIAIDPNQDELKRLRPGMSVITSVDTSSR 389


>gi|254414803|ref|ZP_05028567.1| auxiliary transport protein, MFP family, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196178292|gb|EDX73292.1| auxiliary transport protein, MFP family, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 398

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 52/390 (13%), Positives = 124/390 (31%), Gaps = 51/390 (13%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIK---SPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
            + P   +V++ G +     ++ +    S  +  I+K  VE G ++  G  +   ++   
Sbjct: 53  SVAPEITTVTALGRLEPAGEMINLTASTSIQASRIEKLLVEEGDRVQTGQIIAILDN--- 109

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                                    D L       E      + +L        +   + 
Sbjct: 110 ------------------------RDRLQASLQKAENQVRVAQAKLAQVKAGAKTGELQA 145

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               I+ +       L   R+              L A + + + +    ++L+++ AVS
Sbjct: 146 QRAEIARLQADRTGSLAAQRAA----------VERLEAEVQNARLEYERYESLYQQGAVS 195

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            +  + +      +  ++++   E   +     E   +A        +    DLE  +  
Sbjct: 196 ASQRDAKRLAYITAQQQVQQAQAELGRIETTSQEQIQQAQATLDRLAEVRPVDLEAAEAE 255

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--IVPHSKLTYI 330
                + +   +   EQ  + SP AG I+   ++         + +    IV   +   +
Sbjct: 256 VQSAKATVVEAQANLEQAEVRSPRAGQIIKIHTY-------PGEKIADQGIVTLGQTQQM 308

Query: 331 R--AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           +  A+V    I  V++G  AT+  P   +  +   + I  +++      ++     +   
Sbjct: 309 KAIAEVYQSDILKVQEGQPATITSPVIPNSLQGTVERIGLQVEQQQVVDEDPAANIDAKV 368

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           V + I     S  N+   +     V    +
Sbjct: 369 VEVHIRLDPNSSQNVARLSNLQVTVTIQTE 398


>gi|15890507|ref|NP_356179.1| multidrug resistance efflux pump [Agrobacterium tumefaciens str.
           C58]
 gi|15158745|gb|AAK88964.1| multidrug resistance efflux pump [Agrobacterium tumefaciens str.
           C58]
          Length = 432

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 92/296 (31%), Gaps = 26/296 (8%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E++E +  D L        ++      +  R+ ++ L R+ +  +     + ++   +  
Sbjct: 138 ENQEVKAGDPLVTLDDGDYRIAFEQADAQIRTEQLSLKRIDAQIIGGEAAQEQAVAQKGA 197

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L +  +   + +                E            +  +        N +  EA
Sbjct: 198 LDAALRGAEITQK------------RATELQAKDVGTVAASDNAQVALDQARANVVAGEA 245

Query: 252 NLEFANYLKEI-SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            +  A    E+     E+ + T            +      + +P  G I      +  +
Sbjct: 246 AISSAKANVELLRAQREEAESTIRSLQLSKDKAARDLAFTVLKAPYDGVIGNLAVQT-GD 304

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                + L  +VP ++  YI A     Q+  V  G    V    + D      +  ++ I
Sbjct: 305 LVSVGKRLASLVPMNE-LYIDANFKETQLARVVPGSKVRVHVDAFDDE---AIEGTVQSI 360

Query: 371 DP----IISQQDNNLQTQEYYEVILKIT-DLAFSDNNI---ELRNGFPAEVLFTAK 418
            P    + S       T  + +VI ++   + FS  ++    LR G    V    +
Sbjct: 361 SPGSGSVFSMLPPENATGNFTKVIQRVPVRIVFSKEDLAKHNLRAGLSVVVDVDTR 416



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 95/305 (31%), Gaps = 36/305 (11%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQ 71
            + + ++  ++G   +     I+      G  +          ++  I    +G + K  
Sbjct: 82  LLPIFALALLVGAGWYGYNWWID------GRFMVSTDDAYIQGDIAVIAPKVAGYVAKVN 135

Query: 72  VENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           V    ++  G PL+T +D        +    I  +++S+K +   I   ++A +    + 
Sbjct: 136 VVENQEVKAGDPLVTLDDGDYRIAFEQADAQIRTEQLSLKRIDAQIIGGEAAQEQAVAQK 195

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L+ A   R  ++                    +   +L      + +        +  
Sbjct: 196 GALDAAL--RGAEITQKRATELQAKDVGTVAASDNAQVALDQARANVVAGEAAISSAKAN 253

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             LLRA     +  +  ++ L +  A         +         L     +  ++ + +
Sbjct: 254 VELLRAQREEAESTIRSLQ-LSKDKAARDLAFTVLKAPYDGVIGNLAVQTGDLVSVGKRL 312

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI------LSPIAG 298
             L     L        I  + ++ Q       SK+ +     + + I      +SP +G
Sbjct: 313 ASLVPMNEL-------YIDANFKETQLARVVPGSKVRVHVDAFDDEAIEGTVQSISPGSG 365

Query: 299 TIVYN 303
           ++   
Sbjct: 366 SVFSM 370


>gi|170736663|ref|YP_001777923.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
 gi|169818851|gb|ACA93433.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
          Length = 374

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/417 (12%), Positives = 126/417 (30%), Gaps = 65/417 (15%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
                R    +   +  +  + + G   W++   IE +  +        +VV + S  SG
Sbjct: 12  TARFSRRQLIAAGVVLAVIALAVFGWHWWTVGRFIESTDDAY----VRADVVTVSSRVSG 67

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + +  V++   + +G  L+  +D +    +D  + ++      +  E++A   L+    
Sbjct: 68  YVTQVAVDDNQPVKRGDVLVRLDDRDYRAKVDDAQAAVAAADATLQAEQAAAATLD---- 123

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                                                       ++          +  +
Sbjct: 124 -------------------------------------------AQIGQQRSQIAQADADA 140

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  RA  +    D T  K L  ++A S     Q      K+  EL       +       
Sbjct: 141 AAARAEAARRDADATRYKQLLAESAASGQRWEQAHADALKARAELTRAGAAVR------- 193

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            +  +         ++ +  + Q +   A   +KL + +   +   I +   G++   ++
Sbjct: 194 -VQTDQQTVLQRRREQSTAAIAQARARLAAAQAKLALAQLDLDHTVIRATRDGSV-GQRA 251

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFK 364
             +  Y +   PL+ +VP S +  + A     Q+  +  G    +    Y       +  
Sbjct: 252 VRAGQYVEVGMPLLAVVPLSDVYVV-ANFKETQLGAMHDGQPVQIDVDTYSGHTLHGRVI 310

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTAK 418
            +        +    +  T  + +++ +I     +      + LR G         +
Sbjct: 311 GLAPGSGAQFALLPPDNATGNFTKIVQRIPVKIRVDAPPAGVVLRPGMSVIARVDTR 367


>gi|227498913|ref|ZP_03929053.1| secretion protein [Acidaminococcus sp. D21]
 gi|226904365|gb|EEH90283.1| secretion protein [Acidaminococcus sp. D21]
          Length = 350

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 105/351 (29%), Gaps = 75/351 (21%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I +  VE G  + +   L   +        D  +  +K     +  +++ +D L+N   
Sbjct: 74  RIAEILVEEGDAVKKDQVLARLDS-------DALQYKVKIAEAQVAAQQAVVDKLHN--- 123

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                                            +  + L   + + +    NR  L+ + 
Sbjct: 124 --------------------------------GTRRQELDQAVAKAQETAANRDFLQREY 151

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              +A   + Q      ++L +                            +        N
Sbjct: 152 ERKQAAYDASQGRSISDESLDDVK-------------------------SKLDAATARAN 186

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E      L  A   KE   D+   +        +L  L+ T  Q  + +P  G I  ++ 
Sbjct: 187 EAQANYELALAGPRKE---DIASGEAKLESLTQELKELQYTLGQYELKAPQDGVI-RSRL 242

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
               + A   +P+ +I   +   ++R  V    +  + +G  A+V    + +      + 
Sbjct: 243 LEVGDMASPQKPVFRIS-LNTKKWVRVYVKESDLGKLHEGSQASVYIDSFPNH---AIQG 298

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +  I         N++T++    +L    +   D +  LR G PA V   
Sbjct: 299 QVGYISGTAEFTPKNVETKDLRSALLYEVRVYVEDPDNLLRMGMPATVKIK 349


>gi|291571469|dbj|BAI93741.1| ABC transporter membrane fusion protein DevB homolog [Arthrospira
           platensis NIES-39]
          Length = 470

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/383 (14%), Positives = 124/383 (32%), Gaps = 55/383 (14%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGI----IKKFQVENGSQILQGTPLLTFEDI-ETT 93
           P+ I V++ G +  E  V+ I S   G+    I++  V+ G  + +G  +   +      
Sbjct: 57  PVSIKVTALGRLEPEGEVISI-SAAGGMENNLIQQLLVQEGDWVQEGDAIAILDSRDRLL 115

Query: 94  DLIDLKKVSIKNLRCHIDTEKSA-----LDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             I+  +  +      ++  K+      L+        LE    +  E     + +  + 
Sbjct: 116 AAIEKAQEQVGLATAKLEQIKAGAKIGELEAARATIARLETERLTNIEAGQAMIARLETE 175

Query: 149 CS----------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            S                    ++  +  + R+ + Y N ++ E +   L    +  ++ 
Sbjct: 176 RSTDIVATEAKIARLQAQKQGEWQVAQATINRIEAEYNNAVNDERRYQELHQQGAISEEL 235

Query: 199 LTMMK---------------NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML-- 241
             + +               NL          + + +  + +  L  ++ I E K  L  
Sbjct: 236 WNLKRLHRITTEEQLQEARFNLIRIENTYNQQIQETQAQLTQIQLAKQQQIEEAKANLDG 295

Query: 242 --RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
             R   +   EA        +    D+   +       + L   E       I++P  G 
Sbjct: 296 MDRGGTQQIREAMATLTAQAEVRPVDIAVAEAEVRSAQAALRQAEADLALAEIIAPRNGQ 355

Query: 300 IVYNQSFSSSNYAQQSQPL--MKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           I+   ++         + +  + IV   +       A+V    I  VK G +A +     
Sbjct: 356 ILKIHAY-------PGEIIDNLGIVELGETRQMVAIAEVYQSDIHRVKIGQSARITSAAL 408

Query: 356 ADIREKKFKAIIEKIDPIISQQD 378
               E +   I++++   I +QD
Sbjct: 409 ----EGELSGIVDRVGLQIQRQD 427


>gi|218662880|ref|ZP_03518810.1| hypothetical protein RetlI_27629 [Rhizobium etli IE4771]
          Length = 338

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/338 (10%), Positives = 91/338 (26%), Gaps = 83/338 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + + +V+ G  + +   L   +       +   + +   LR  +D  K+        
Sbjct: 56  SGRLSELRVDEGDVVKRDAVLAKLDAAPYEFAVRSGEANAAALRATLDKLKAG------- 108

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                     R  ++      Y  + + + N  ++                         
Sbjct: 109 ---------PRPTEIAQARAAYDESLADLENANLA------------------------- 134

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                              + L  +  +S+  L+Q       +    +      K +   
Sbjct: 135 ---------------YERARQLRPQGTISEASLDQATAAKAMAAARSQSANEALKLLEEG 179

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                                D+           + L     + E   + +P  G I+  
Sbjct: 180 SR-----------------VEDIAAADAQLKAAEATLASARTSLEDTELRAPNDGIILS- 221

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +   +      +  +  ++  ++  ++R+ V    +  +  G   +V         EK +
Sbjct: 222 RVRENGAIVSPADTVF-VLSLTEPVWVRSYVAEPDLGRIHPGMKVSV---ASDTAPEKPY 277

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDL 396
           +  I  I P+      S +   L+T   Y + + I   
Sbjct: 278 EGTIGFISPVAEFTPKSVETPELRTDLVYRLRIVIDKP 315


>gi|34580730|ref|ZP_00142210.1| multidrug resistance protein A [Rickettsia sibirica 246]
 gi|28262115|gb|EAA25619.1| multidrug resistance protein A [Rickettsia sibirica 246]
          Length = 355

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 87/263 (33%), Gaps = 11/263 (4%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L      + +   N   +E K S+ +  L    + L + K  F+  A     + +  +  
Sbjct: 99  LAALEASIEACIKNIEIIEQKISIGQISLEQAAEKLKLNKISFDIVATDFMRVQELNKAK 158

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           + S+  L ++ +  +       +   + ++    +L+ +  +    Q    +      + 
Sbjct: 159 FASSKTLDDSKNAYQKAKTDYKQAQLDLDIS-KQHLQLLELEKAAEQEKLKELTENKKVT 217

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            ++ +   +++ + G I  N S    NY    + L  IV      YI+A     QIQ  K
Sbjct: 218 LRSLQNTKLIAMVPG-IFGNSSLEVGNYIVPGRVLFSIV-QDNTMYIQANFKETQIQKFK 275

Query: 344 KGYTATVRFPHYAD-IREKKF----KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
            G    + F      +   K      A   K   I         T+    V + I    F
Sbjct: 276 SGMKVKIEFDALPKKVIYGKIRNIAPATGSKFSLIPPDHATGNFTKSVQRVPVLID---F 332

Query: 399 SDNNIELRNGFPAEVLFTAKNTT 421
              N  L  G  A V      +T
Sbjct: 333 ESPNANLVPGMSAIVSIRTDQST 355


>gi|299137134|ref|ZP_07030316.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX8]
 gi|298600539|gb|EFI56695.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX8]
          Length = 375

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 98/357 (27%), Gaps = 18/357 (5%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+   V    ++  G      +D             I      +                
Sbjct: 23  IRSQWVRE--EVGSGEQ--RTDDAYVKAFQTPLSTRISGSVKRVAARDYQPAKAGELVVE 78

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           LE A      +      +              +   S++     +     +    +    
Sbjct: 79  LEDADYQAVLKESQAALEAAQAEYSANQDAKRAADASIEAAQAGIEQAQASADAAQASID 138

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              A L+  Q +    + L E  A ++    Q +         L     +       +  
Sbjct: 139 ATGASLAQAQSEFDRHQGLLETKAATRQQFEQAQSARLNFVAGLSGKKADLARAQAAVKA 198

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                +      +   ++D +        + + + + +       I SP  G++   +  
Sbjct: 199 SEAGLSSAKQQRVSLNAKD-QGLLAQIEAKKAAIVVAQVNVGYTKIFSPADGSLGEFRVH 257

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                    Q ++ +V      +I A     Q+ + K G  A +R         K F   
Sbjct: 258 -PGQLVGAGQQIVDLV--QSEIWIEANFRETQLGYAKSGDPADIRIDALPS---KVFHGH 311

Query: 367 IEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFT 416
           I +I P    Q      +  T  + +VI ++      D +    +LR GF AEV+  
Sbjct: 312 ILEIAPASGSQFALLPPDNATGNFTKVIQRVPVKISLDQDPSLTQLRPGFSAEVVIH 368


>gi|300779374|ref|ZP_07089232.1| Acr family acridine efflux pump AcrA [Chryseobacterium gleum ATCC
           35910]
 gi|300504884|gb|EFK36024.1| Acr family acridine efflux pump AcrA [Chryseobacterium gleum ATCC
           35910]
          Length = 420

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 82/228 (35%), Gaps = 24/228 (10%)

Query: 215 DLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           DL + +    K+ L+  + N+   +  +   ++LY    +  A+Y    +      +   
Sbjct: 95  DLLKFQSEQIKANLQNAKSNLAYNEININRQSQLYKVGAISKADYDN-ATNQYNAAKAQV 153

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKLTYIR 331
               ++L+  +K      I SPI GT++          A    +  L  I        +R
Sbjct: 154 NAVTAQLSTADKNLSLTNIYSPIDGTVLNRNVSEGQTVASSFSTPTLFSIAKDLTKMRVR 213

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQDNNLQTQEYYEV 389
           A V    I +VK G  AT     + D     F   + ++   P +S    N      Y  
Sbjct: 214 ASVDEADIGNVKVGQKATFTVDAFPDET---FDGEVSEVRLHPTVSSNVVN------YTT 264

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH-PITDNWPK 436
           I+        +++++L+ G  A +    +   +   ++  P+     +
Sbjct: 265 IINAD-----NSSLKLKPGMTANITIYTQ---VLNNVMKIPVAATSFR 304



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 59/172 (34%), Gaps = 28/172 (16%)

Query: 18  KRMTLLSIIGIIGLI-TWSIL-----------------LPIEISVSSSGEILNEDNVVEI 59
           K+     + GII +   W                      I  S++++G I   D V  +
Sbjct: 6   KKWLYWVVGGIIAIGAVWFFFIREKEIKIQLETVKPEMGDISNSITATGTIQPVDTV-AV 64

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
            +  SGIIK   V+  S + +G  L T +        DL K   + ++ ++   KS L +
Sbjct: 65  GTQVSGIIKNIYVDFNSTVKKGQLLATLDP-------DLLKFQSEQIKANLQNAKSNLAY 117

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                +   + ++       D+    +          +++V   L      +
Sbjct: 118 NEININRQSQLYKVGAISKADYDNATN--QYNAAKAQVNAVTAQLSTADKNL 167


>gi|265764268|ref|ZP_06092836.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263256876|gb|EEZ28222.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 298

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 89/237 (37%), Gaps = 33/237 (13%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             M+S+   R D+  + +  R  +++ +++   ++NL +  A +Q  L+  E  +     
Sbjct: 81  ASMKSVESQRPDVNKQIAATRQQIATARREKRRVENLLKAGAANQKQLDDWEAQIALLER 140

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +L   +   +N    + E      ++ A                          +E    
Sbjct: 141 QLTAQMSSLQNSTNSLTEQGSSVAIQVAQ-------------------------VEDQLA 175

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SPI+GT++  +       A   +PL K V      Y+RA +T +Q+  VK G   
Sbjct: 176 KCHVVSPISGTVLA-KYAEVGELAAVGKPLFK-VADIDQMYLRAYITSEQLSQVKLGNRV 233

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSD 400
           TV F  Y     K++  ++  I          + T+E      Y V + + +     
Sbjct: 234 TV-FSDYGGDERKEYPGVVTWISDRSEFTPKTILTKEERANLVYAVKIAVKNDGLLK 289


>gi|70731437|ref|YP_261178.1| RND family efflux transporter MFP subunit [Pseudomonas fluorescens
           Pf-5]
 gi|68345736|gb|AAY93342.1| efflux transporter, RND family, MFP subunit [Pseudomonas
           fluorescens Pf-5]
          Length = 390

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 74/182 (40%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR  P     +  L +I ++ +  W  +                IE SV++ G +    
Sbjct: 1   MKRPRPTRRALLAALCVIPVVAIAAWKFIPAGRDQFTTVQVSRGDIESSVTALGTLQPRR 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ +  SG I+K  VE+G Q+ +G  L+  +       +D  + SI+NL+  +  + 
Sbjct: 61  YV-DVGAQASGQIRKIHVESGDQVKEGQLLVEIDPSTQQAKLDASRFSIENLQAQLQEQY 119

Query: 115 SALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +       KY     L+    +REE +     +  +T +++  +   I     SL+    
Sbjct: 120 AQNQLARQKYQRQQNLKAGGATREEDVQTAQAELKATQARIDMYKAQIRQAQASLRSDQA 179

Query: 170 RM 171
            +
Sbjct: 180 EL 181



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 65/195 (33%), Gaps = 5/195 (2%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            + ++     + +    S  + ++ +E+   +    L       T    L       +N 
Sbjct: 52  ALGTLQPRRYVDVGAQASGQIRKIHVESGDQVKEGQLLVEIDPSTQQAKLDASRFSIEN- 110

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
             Q +     +  +L    ++++  L+      +E        LK     ++  +     
Sbjct: 111 -LQAQLQEQYAQNQLARQKYQRQQNLKAGGATREEDVQTAQAELKATQARIDMYKAQIRQ 169

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAK 333
             + L   +       I +P++GT+V   +          Q  PL+  +       + A+
Sbjct: 170 AQASLRSDQAELGYTRIYAPMSGTVVAVDAR-EGQTLNAQQQTPLILRIAKLSPMTVWAE 228

Query: 334 VTPKQIQHVKKGYTA 348
           V+   I HVK G  A
Sbjct: 229 VSEADIGHVKPGMHA 243


>gi|288958217|ref|YP_003448558.1| efflux transporter MFP subunit [Azospirillum sp. B510]
 gi|288910525|dbj|BAI72014.1| efflux transporter MFP subunit [Azospirillum sp. B510]
          Length = 549

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/385 (10%), Positives = 109/385 (28%), Gaps = 70/385 (18%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P+  +++++G +     V E+ S  SG I +   +  S++  G  L      +    + 
Sbjct: 42  GPLVSTITATGTMSALVTV-EVSSQLSGQIAELYADFNSRVTSGQILARLNGDQLAARLA 100

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                + + +  +  +++ LD                   L +      +  +++    +
Sbjct: 101 QAGADVDSAKASLIQQQALLD--------------KARADLANAQASVANADAQIVRADL 146

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +       ++  R                                     +  V+  DL 
Sbjct: 147 AQRDAERDLRRRRDLQG---------------------------------RGVVAAADLE 173

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E   + +  ++     +++              +  A             +   A   
Sbjct: 174 KAETAAHSAQAQVIAARAQKRQAEAAEASAEASLAVAVAQVEV--------ARAQVAQRE 225

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRAKVT 335
           + L ++     +  I SPI G +V     +    A    +  L  I    +   + A + 
Sbjct: 226 AALQLVRVDVNRSVIRSPIDGVVVNRAVSTGQTVAASLSAPTLFTIAQDLRQMEVLANID 285

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              I  V++G         +       F   + ++  +  ++D  + T            
Sbjct: 286 EADIGRVREGMPVRFTVNAFPGD---SFIGRVAQV-RLAPKEDQTVVTYI--------VV 333

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNT 420
           +   +  + L  G  A +  T +  
Sbjct: 334 ITVENPELRLLPGMTANLRITVEER 358


>gi|153805856|ref|ZP_01958524.1| hypothetical protein BACCAC_00095 [Bacteroides caccae ATCC 43185]
 gi|149130533|gb|EDM21739.1| hypothetical protein BACCAC_00095 [Bacteroides caccae ATCC 43185]
          Length = 363

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/360 (15%), Positives = 116/360 (32%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I K       ++ +G  L+  +D          K+ +      +   ++    +N  
Sbjct: 75  SGYIDKIYFTEHQEVHKGDTLMVLDD-------REYKIRVMEAEAALKDAQAGATIINAT 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +  +      +  + +                                           
Sbjct: 128 LNTTQTTASVYDASIAE------------------------------------------- 144

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               +   L+  +KD    +NL ++NA +   L Q       +  +L     ++K  L  
Sbjct: 145 ----IEVRLAKLEKDRKRYENLVKRNAATPIQLEQIITDYEATRKKLEAVERQKKAALSG 200

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++E+            + +S +    + T A EM++L           +++P  G  +  
Sbjct: 201 VDEV----------SYRRVSTEAAIQRATAALEMARLN-----LSYTVVVAPCDGK-LGR 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +S     +    Q +  I+P+++   + A     QI+++  G   +V     +D   K+F
Sbjct: 245 RSLEEGQFISAGQTITYILPNTQKWIV-ANYKETQIENLHIGQEVSVTVDAISD---KEF 300

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
              +  I           P  +   N ++ Q+   V +  T+L+  DN   L  G    V
Sbjct: 301 TGKVTSISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTNLSKEDNE-RLAAGMMVVV 359


>gi|119489101|ref|ZP_01622007.1| hypothetical protein L8106_22401 [Lyngbya sp. PCC 8106]
 gi|119454850|gb|EAW35994.1| hypothetical protein L8106_22401 [Lyngbya sp. PCC 8106]
          Length = 516

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 59/473 (12%), Positives = 149/473 (31%), Gaps = 83/473 (17%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K++   +      + I+G+ G+    +   I  S   +  +        +  P +G +  
Sbjct: 40  KKSTFPTQWIAWGVVILGLGGIGMIPVNHSISGSTIITSTV---GERQSVTMPEAGTLT- 95

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V +   +  G  L T       D     +  I   +  ++  +  L     + +V + 
Sbjct: 96  LHVRSNQTVKPGDVLATVSSSALEDKKAATEQKISEAKTAVNGAEQKLIIAQTRLEVAKS 155

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                 EQ        +          I ++ +      + ++ I    L LEN+ + L 
Sbjct: 156 LESIALEQRNRKQQDLNQAQFSSGAARIRAIQQEQAGIESEIKGIENQILGLENERAGLE 215

Query: 190 --------------ALLSSHQKDLTMMKNLFEKNAV--SQNDLNQQERIVYKSTLELREN 233
                           L   +  L   K L E   +  +  +L   +    +   +++  
Sbjct: 216 NELVGIGKNIEGLNEQLEIVESALEKRKGLVEDGLIGSASPELMNLKVKAAELKTQIKRE 275

Query: 234 ------------------------------------------IHEQKNMLRHINELYDEA 251
                                                     I   +  L     L ++ 
Sbjct: 276 ENSIETHQQKINQKQNQILQTQQLINQRQQQIGVKSEGVNEVIENLEEQLEEAENLVEQK 335

Query: 252 NLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTREQKTILSPIAGTI----VYNQ 304
            +E  +  +E+   L +    Q   + + ++L  LE+ ++Q  I + ++GTI    +   
Sbjct: 336 TVERISTQREVEASLAEIADKQYLLSQQSAELNRLEQQQQQLAIKATVSGTITTTDLDLL 395

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +  +    +  + ++ +V +        ++  ++I  + +    T +          +++
Sbjct: 396 NNQT---LEAGREILNVV-NLSSLTGLVEIQQEEIDLIHQSLPVTFKP---RQATVDQYQ 448

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           A IE I P+I   ++   +     + ++IT     +++ +L+ G         
Sbjct: 449 AKIEDIQPVIKSDESGQNS----VLQIRIT---IDNDDRQLQPGLEGVAHIQT 494


>gi|312961814|ref|ZP_07776312.1| HlyD family secretion protein [Pseudomonas fluorescens WH6]
 gi|311284073|gb|EFQ62656.1| HlyD family secretion protein [Pseudomonas fluorescens WH6]
          Length = 381

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/423 (14%), Positives = 127/423 (30%), Gaps = 86/423 (20%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           ++L+    +SL    +  +  +I L  W  L P   +V ++   L    V  I    SG 
Sbjct: 30  RSLRVRILSSLGFAAIAVVGVLIVLYAWQ-LPPFSSAVETTENALVRGQVTIIGPQLSGY 88

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V++   +  G  L+              ++  +  R  +D   + L         
Sbjct: 89  VFEVPVQDFQYVKAGDLLV--------------RLDDRIYRQRLDQALAQLA-------- 126

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                    V    +++V +        ++      +D + ++ 
Sbjct: 127 -------------------------VQKAALANVVQQRNSAEATIKLRQAALVDSQAQAR 161

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              A       DL   + L    +VS+ +L+       ++   + +     +   + +  
Sbjct: 162 KSTA-------DLRRNEELISDGSVSRRELDVTRAANAQTIAAVAQAQASLEIARQDLQT 214

Query: 247 LY-DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +  +  +LE A    + + +L                         I +P  G +     
Sbjct: 215 VIVNRGSLEAAVASADAAVEL----------------ARIDLSNTRITAPRDGQLGQIGV 258

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                Y      LM +VP  K  ++ A +   Q+ +V+ G   T           +KF  
Sbjct: 259 R-LGAYVNSGAQLMALVP--KQLWVIANMKETQMDNVQVGQPVTFTVDAL---THRKFHG 312

Query: 366 IIEKIDPIISQQ----DNNLQTQEYY----EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            ++ I P    +      +  T  +      V ++IT       +  LR G    V    
Sbjct: 313 TVQHISPATGSEFSLLQADNATGNFVKIAQRVPVRITVDPDQAESERLRPGLSVVVSIDT 372

Query: 418 KNT 420
              
Sbjct: 373 AGR 375


>gi|303256230|ref|ZP_07342246.1| efflux transporter, RND family, MFP subunit [Burkholderiales
           bacterium 1_1_47]
 gi|331001288|ref|ZP_08324914.1| efflux transporter, RND family, MFP subunit [Parasutterella
           excrementihominis YIT 11859]
 gi|302860959|gb|EFL84034.1| efflux transporter, RND family, MFP subunit [Burkholderiales
           bacterium 1_1_47]
 gi|329569015|gb|EGG50811.1| efflux transporter, RND family, MFP subunit [Parasutterella
           excrementihominis YIT 11859]
          Length = 433

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 74/209 (35%), Gaps = 16/209 (7%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +S+  L +    + ++  +L   + E + +    +    E + + A  + +    ++  Q
Sbjct: 135 LSKATLAESLATLKEAKAKL-SRLQEVRRLSGGKSPSKTEIDAQEA-LVAKAQASVQSAQ 192

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLT 328
               D    L   E    +  I SPI G ++          A   Q   L+K+    K  
Sbjct: 193 AKITDSEQALKSAESDLSKTHISSPIDGVVLARSVEPGYAVAASLQAVELLKLATDLKDL 252

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            ++  V    +  VK G  A+     Y D       A ++K+    ++ DN         
Sbjct: 253 ELQVNVDEADVGAVKPGQKASFTVSAYPDRNFP---AELKKVAFGSTKTDN--------- 300

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTA 417
           V+  +T L   + ++ LR G  A      
Sbjct: 301 VVTYVTYLDVKNPDLLLRPGMTATATIRT 329



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 76/226 (33%), Gaps = 15/226 (6%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS++G I      V + S  SGI++K  V+   Q+ +G  L+  +D +    ++  K S+
Sbjct: 75  VSANGTINPI-RTVSLGSELSGIVRKVNVDVNDQVKKGEVLIELDDTKLKASVERAKASL 133

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +    + L     K   L         Q +  L    S      +   + V ++
Sbjct: 134 DLSKATLAESLATLKEAKAKLSRL---------QEVRRLSGGKSPSKTEIDAQEALVAKA 184

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV-----SQNDLNQ 218
                +    I  +   L++  S L     S   D  ++    E            +L +
Sbjct: 185 QASVQSAQAKITDSEQALKSAESDLSKTHISSPIDGVVLARSVEPGYAVAASLQAVELLK 244

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
               +    L++  +  +   +       +  +     N+  E+ +
Sbjct: 245 LATDLKDLELQVNVDEADVGAVKPGQKASFTVSAYPDRNFPAELKK 290


>gi|255022170|ref|ZP_05294173.1| secretion protein HlyD family protein [Acidithiobacillus caldus
           ATCC 51756]
 gi|254968434|gb|EET25993.1| secretion protein HlyD family protein [Acidithiobacillus caldus
           ATCC 51756]
          Length = 346

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/406 (11%), Positives = 120/406 (29%), Gaps = 98/406 (24%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSG-EILNEDNV--VEIKSP--FSGIIKKFQVEN 74
             LL+ + +  LI W     +    ++    +    N+   ++++    +G +++  V+ 
Sbjct: 10  GLLLAAVLVGALIFW-----LTQRTTAPSNRLTIYGNIDIRQVQTAFDDNGRVQRLLVQE 64

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++  G  L   + +   D +                               E A  ++
Sbjct: 65  GDRVRAGQLLAEIDPVRFADAVARD----------------------------EAAVAAQ 96

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E+ +   L              +++   SL                             +
Sbjct: 97  EQVVAKLLAGTRPEEIAEARAELAAAAASLH----------------------------N 128

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            +      K L   + V +  L+     +  +      +       +R   +        
Sbjct: 129 AELVWQRQKALAADHYVPRQSLDNAAAALKSARANYERSRQALTLAVRGPRK-------- 180

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                     D+   +   A + + L++ ++  +   + +P    +   +     +    
Sbjct: 181 ---------EDIAAARAQLAADRAALSLAQRQLQDTKLRAPADAVVQD-RIVEMGDMVSP 230

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           + P+  +       ++RA +  K +  V+ G  A ++   +     + F+  +  I P  
Sbjct: 231 NTPVFSLA-LDNPVWVRAYLPEKALGKVRLGMRAEIQSDSFP---GQSFRGWVGFISPTA 286

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                + Q   L+T+  Y V +        ++   LR G P  V  
Sbjct: 287 EFTPKTVQTPELRTELVYRVRV-----YACNSQHRLRLGMPVTVQI 327


>gi|291618551|ref|YP_003521293.1| EmrA [Pantoea ananatis LMG 20103]
 gi|291153581|gb|ADD78165.1| EmrA [Pantoea ananatis LMG 20103]
 gi|327394931|dbj|BAK12353.1| multidrug resistance protein A EmrA [Pantoea ananatis AJ13355]
          Length = 390

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 87/277 (31%), Gaps = 34/277 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     L   + ++    +N    +   +L +  L   Q DL   + L   N + +
Sbjct: 98  QQAFEKAQTGLATSVRQVHQEMINAKQYQATIALRQTALDQAQADLKRREPLGASNLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  EL   + +       I     E                  NQ   
Sbjct: 158 EELQHARDAVASAKAELDVAVQQYNANQAMILNTSLE------------------NQPAV 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L       ++  I SP+ G +   +S    +    S PLM +VP +   ++ A 
Sbjct: 200 KQSAAQLRDAWLALQRTDIRSPMDGYVSR-RSVQVGSQINTSTPLMAVVPATD-LWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+  V+ G  ATV    Y D     +   +  +D          P  +   N ++ 
Sbjct: 258 FKETQLAGVRIGQPATVVADIYGDDV--VYHGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +   V +++     + + + +  G    V     N 
Sbjct: 316 VQRLPVRIELNQDEVAKHPLRI--GLSTLVEIDTDNK 350



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/175 (10%), Positives = 53/175 (30%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V++ +  SG + K   ++   + +G  L++ +  +     +  +  +      + 
Sbjct: 57  VAGNQVQVMAQVSGSVNKVWFDDTDFVKKGDVLVSLDKTDAQQAFEKAQTGLATSVRQVH 116

Query: 112 TE-------KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            E       ++ +       D  +   + RE      L               +     +
Sbjct: 117 QEMINAKQYQATIALRQTALDQAQADLKRREPLGASNLIGREELQHARDAVASAKAELDV 176

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
            ++        +    LEN+ ++ ++        L + +          VS+  +
Sbjct: 177 AVQQYNANQAMILNTSLENQPAVKQSAAQLRDAWLALQRTDIRSPMDGYVSRRSV 231


>gi|269103125|ref|ZP_06155822.1| multidrug resistance efflux pump [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163023|gb|EEZ41519.1| multidrug resistance efflux pump [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 335

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 102/351 (29%), Gaps = 29/351 (8%)

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G  L T       +  + +      +   +      +        V +  +  +  
Sbjct: 6   IVFIGIILATVAGYRYIESQNEESTDNAYVHADVTAISPEVGGQVMAIHVKDNQWVKQGT 65

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            L       +    ++    +     +LK   TR+    +     +   +   A  +   
Sbjct: 66  PLFSIDNADYEANYQISQAAVEVAQAALKNNQTRIDMQKVKIEQAKQNIASADANANHQN 125

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +L     L +   +S+N    Q      +  +L+       +  + +  L+ E     A
Sbjct: 126 AELKRFARLLKPKMISENHYEAQRSTTIDANAKLKSAQLLLTSEQKLLETLHTEKQQLIA 185

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              +                 +KL +   + ++  I +P  G I   Q      Y Q   
Sbjct: 186 QVQQ---------------VQAKLKLNAISLQRTVIKAPFDGYIASRQV-QVGKYVQPGM 229

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-- 374
            ++ +VP  +  ++ A     Q++ +  G    V    Y D         ++ I P    
Sbjct: 230 GVIVMVP--RKVWVEANFKETQLKEISVGQIVDVVLDGYPDT---VLTGKVDSITPATGA 284

Query: 375 ------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 +Q       +    V ++I          ++  G  AEV    ++
Sbjct: 285 QFSLLPAQNATGNFVKVVQRVPVRIDITIPKALEHKVYPGLSAEVTVVTQS 335



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 61/169 (36%), Gaps = 5/169 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  I     G +    V++   + QGTPL + ++ +      + + +++  +  + 
Sbjct: 35  VHADVTAISPEVGGQVMAIHVKDNQWVKQGTPLFSIDNADYEANYQISQAAVEVAQAALK 94

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS--VYRSLKMKLT 169
             ++ +D    K +  ++   S +        +       +    IS           + 
Sbjct: 95  NNQTRIDMQKVKIEQAKQNIASADANANHQNAELKRFARLLKPKMISENHYEAQRSTTID 154

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQND 215
               +   +L L ++  LL  L +  Q+ +  ++ +  K   NA+S   
Sbjct: 155 ANAKLKSAQLLLTSEQKLLETLHTEKQQLIAQVQQVQAKLKLNAISLQR 203


>gi|322420015|ref|YP_004199238.1| secretion protein HlyD family protein [Geobacter sp. M18]
 gi|320126402|gb|ADW13962.1| secretion protein HlyD family protein [Geobacter sp. M18]
          Length = 359

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 88/312 (28%), Gaps = 24/312 (7%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +S +  + ++   L +     + Q +             +   + +   SL+M       
Sbjct: 58  ESHIHSVASRVPALVQRVAVVDNQFVHKGDLLVELDPADYQARVKAAAGSLEMARNETSG 117

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
            Y           L  A L     DL   + L+ K  + +  L +       +  ++RE 
Sbjct: 118 DYAEVESARASVGLTAARLEQANLDLKRAEALYAKEVIPKEQLERTRTAQRVAQAQVREA 177

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              +      I                             A +  +L   +       IL
Sbjct: 178 QEAENRAKAMIG-----------------VSGTGSKDARVAQKQGELETAKLNLSYARIL 220

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G I         NY Q  Q LM +V      +I A     Q+ +V+ G        
Sbjct: 221 APSDGYITRKGV-EVGNYVQPGQALMAVVALDDA-WITANYKESQLGNVRPGQAVEFTVD 278

Query: 354 HYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNG 408
            Y       K ++I+       S       T  Y +V     ++IT    SD    LR G
Sbjct: 279 GYPGRHFTGKVESIMAGTGAAFSLLPPENATGNYVKVTQRIPVRITIDRKSDPEHVLRIG 338

Query: 409 FPAEVLFTAKNT 420
                      T
Sbjct: 339 MSVVPTILTGQT 350



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/177 (9%), Positives = 51/177 (28%), Gaps = 4/177 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
               + L +     +  + ++ +  + GL  W        +   +     E ++  + S 
Sbjct: 12  PTERRGLSKKQRGGIVLLIIILVATVFGLRQWIR----SKTHIETDNAFVESHIHSVASR 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
              ++++  V +   + +G  L+  +  +    +     S++  R     + + ++    
Sbjct: 68  VPALVQRVAVVDNQFVHKGDLLVELDPADYQARVKAAAGSLEMARNETSGDYAEVESARA 127

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              +     E     L      Y            +   + +     R      NR 
Sbjct: 128 SVGLTAARLEQANLDLKRAEALYAKEVIPKEQLERTRTAQRVAQAQVREAQEAENRA 184


>gi|167567839|ref|ZP_02360755.1| HlyD family secretion protein [Burkholderia oklahomensis EO147]
          Length = 331

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 86/253 (33%), Gaps = 26/253 (10%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKS-TL 228
            R I ++R + + +++ + A  S+            E   VS + DL +++R   ++ TL
Sbjct: 90  RRQIDIDRANADVQTAQVEANRSNVAA--------LEHGVVSDRFDLAEKQRDFARADTL 141

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISR-DLEQNQRTFADEMSKLTILEKTR 287
             +  + +Q   L    E    A L     L   +R D+           +K  + E T 
Sbjct: 142 ARQSAVSQQSRDLAQTAERQSAAALARDQALLAAARNDVALAAANVTAVQAKRKLDETTL 201

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               + +P  G I   +       A     +  I       ++RA V    +  ++ G  
Sbjct: 202 SYAELAAPFDGVI-SVRHAELGQLAGPGVAIFTIAELDH-VWLRAYVNEPDVGRIRIGEA 259

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-----EYYEVILKITDLAFSDNN 402
             VR   Y     +     I  + P        ++T      + Y + + I +       
Sbjct: 260 VDVRTDAYPSAVYR---GRISFVSPQAEFTPKTVETHEERITQVYRIRIDIDNPT----- 311

Query: 403 IELRNGFPAEVLF 415
            EL  G PA+   
Sbjct: 312 HELLPGMPADATI 324


>gi|124514666|gb|EAY56178.1| putative secretion protein HlyD [Leptospirillum rubarum]
          Length = 317

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 81/234 (34%), Gaps = 15/234 (6%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN--LEFA 256
              ++ + E N  +  DL +         + L     + +  +R     +  A       
Sbjct: 90  FQRLRQINESNQSAFKDLQKAISTEESLKVLLLNAESQYRRGIRLRKGGFITAQDLENLR 149

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             + +    L Q ++    E  +L I E      T+ +PI G +   +           Q
Sbjct: 150 TTVDDDRSQLLQAKKVVLSERMRLEITESHPLNYTVHAPIDGQVAE-RIAQIGEVVSPGQ 208

Query: 317 PLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           PL+ +V P     +I AKV   ++  V+ G    +    Y + +   F   +E+I P+ +
Sbjct: 209 PLLSVVNPRD--IWITAKVKETRMTSVRVGQPVDIDVDTYPERK---FHGHVERILPVSA 263

Query: 376 QQ----DNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEVLFTAKNTTLA 423
                      +  + +VI +I      D+     LR G   EV    +  +  
Sbjct: 264 AAVSLLPPENASGTFVKVIQRIPVRIHVDDAGPYILRPGMSTEVRIHIRKGSPW 317



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 49/128 (38%), Gaps = 9/128 (7%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRC 108
            + N++ I +  +G + +F +  G  +++G  +   +      L  + +    + K+L+ 
Sbjct: 50  VDGNIILISANANGRVMEFPLNQGDPVVKGQEVARIDTTGFQRLRQINESNQSAFKDLQK 109

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESR------EEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            I TE+S    L N      +    R       + L +         S++       +  
Sbjct: 110 AISTEESLKVLLLNAESQYRRGIRLRKGGFITAQDLENLRTTVDDDRSQLLQAKKVVLSE 169

Query: 163 SLKMKLTR 170
            +++++T 
Sbjct: 170 RMRLEITE 177


>gi|332295963|ref|YP_004437886.1| efflux transporter, RND family, MFP subunit [Thermodesulfobium
           narugense DSM 14796]
 gi|332179066|gb|AEE14755.1| efflux transporter, RND family, MFP subunit [Thermodesulfobium
           narugense DSM 14796]
          Length = 368

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 88/278 (31%), Gaps = 19/278 (6%)

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +     ++V    I+ V  S      ++ +       +  +   L   + S  +   ++ 
Sbjct: 39  QQEVKTAQVTKRTITEVVNSTGTINPQVGAQINVGARITGQVIKLNVQVGSVVQAGEVLA 98

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            +       +  +   E+        L  N +  K       +L++E  +    Y    +
Sbjct: 99  EI-----DPRPQIAALEQAKSNYQAAL-SNYNYAKVTYERYAKLFEEGLISKDKYDNAKA 152

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-SQPLMKIV 322
             L Q +       + +   +   E  TI +PI+G +    +          + P    +
Sbjct: 153 NYLAQ-KGAVDAAKAAVNTAQVNLEYCTITAPISGMVSAVTTHQGETVVSGLNAPNFVTI 211

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  + A V    I  VK G  AT     Y D   K F   +  I P  +   N + 
Sbjct: 212 DDLDKLEVDASVDETDIGKVKVGMPATFTVLAYPD---KTFTGTVAAIYPTSTVVSNVV- 267

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              YY  ++KI     S+    LR G  A V    +  
Sbjct: 268 ---YYTTVIKID----SNPEHLLRPGMTANVNIKVQEK 298



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 52/136 (38%), Gaps = 4/136 (2%)

Query: 40  IEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           I   V+S+G I  +      + +  +G + K  V+ GS +  G  L   +       ++ 
Sbjct: 52  ITEVVNSTGTINPQVGAQINVGARITGQVIKLNVQVGSVVQAGEVLAEIDPRPQIAALEQ 111

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            K + +    + +  K   +     ++   + +  +++ +   L   G   +  + V   
Sbjct: 112 AKSNYQAALSNYNYAKVTYERYAKLFEEGLISKDKYDNAKANYLAQKGAVDAAKAAVNTA 171

Query: 156 GISSVYRSLKMKLTRM 171
            ++  Y ++   ++ M
Sbjct: 172 QVNLEYCTITAPISGM 187


>gi|27376043|ref|NP_767572.1| multidrug resistance protein A [Bradyrhizobium japonicum USDA 110]
 gi|27349182|dbj|BAC46197.1| multidrug resistance protein A [Bradyrhizobium japonicum USDA 110]
          Length = 387

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 98/302 (32%), Gaps = 27/302 (8%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           RE QL+    +        F   +      L    +   ++  N     +  SL +  + 
Sbjct: 94  REGQLVKQGDELFEIDPVPFRLAVDEARAQLAQAQSTYDNLRANIKIYGDMLSLAQQGVD 153

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q+D+   + L + +  SQ DL+     +  S   + + + +Q +  +   +L  + +L
Sbjct: 154 LKQRDVERKQALVKNSYGSQLDLDNAANALVTS-GSIAQYVKQQISAAK--TQLLGDTDL 210

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               +              +A   SKL   E+  +   + +P+ G     +      Y  
Sbjct: 211 PLEKF------------PPYAQAKSKLDNAERNLDHAVVRAPMGGVATQVEQIQLGRYVT 258

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              P+  I+  +   ++ A      + +V +G   T+    + +     FK  I  + P 
Sbjct: 259 AGTPVFSIIDVAHP-WVDANPKESDLTYVTEGQPVTLEVDAFPNH---VFKGKIGSLSPG 314

Query: 374 ISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
              Q         T  + +V+    ++I          +L+ G          +      
Sbjct: 315 TGAQFAILPPQNATGNFVKVVQRVPIRIYFDETDKYVRKLKAGMSVYATIDTGHRRSLAG 374

Query: 426 II 427
           + 
Sbjct: 375 LF 376



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 59/175 (33%), Gaps = 8/175 (4%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              +R  L+ ++ I+  I    L         + +       V +    SG I+K  V  
Sbjct: 36  RRYRRFLLMVVLPIVAAIGGLTLYLNGGRYVGTDDAYVGAQKVLVTPDISGKIEKVVVRE 95

Query: 75  GSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           G  + QG  L   + +       E    +   + +  NLR +I      L       D+ 
Sbjct: 96  GQLVKQGDELFEIDPVPFRLAVDEARAQLAQAQSTYDNLRANIKIYGDMLSLAQQGVDLK 155

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS-LKMKLTRMRSIYLNRLDL 181
           ++  E ++  + +  G      +       S      +K +++  ++  L   DL
Sbjct: 156 QRDVERKQALVKNSYGSQLDLDNAANALVTSGSIAQYVKQQISAAKTQLLGDTDL 210


>gi|256425079|ref|YP_003125732.1| secretion protein HlyD family protein [Chitinophaga pinensis DSM
           2588]
 gi|256039987|gb|ACU63531.1| secretion protein HlyD family protein [Chitinophaga pinensis DSM
           2588]
          Length = 347

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/419 (14%), Positives = 123/419 (29%), Gaps = 82/419 (19%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLIT----WSILLPIEISVSSSGEILNEDNVVEIK 60
           M     + HP ++    + + +   G+      W      E +  +      E  +  + 
Sbjct: 1   MKATKTQIHPGNIVLTIIAAGLLFAGIYYITRYWRYSQQYEETNDAQ----VESYINPVS 56

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +   G I++   E    + +G  L+  +D              +  R  +          
Sbjct: 57  ARAGGYIQRVCFEEHQLVKEGDTLVILDD--------------REYRAQL---------- 92

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                V E A E    QL             V    I++   S ++   +++        
Sbjct: 93  ----QVAEAATEDAHAQLT------------VLTANIAAAVTSTRVNQDQIKGAA----- 131

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                    A     Q D+    NL ++ A +  +L Q +     +  +     +  K  
Sbjct: 132 ---------AKYVQQQLDIKRYTNLVKEEAATGAELEQVKARYDVAESDYSAARNSLKTN 182

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              I EL     L  A+            ++  A E+++L           I +P +G  
Sbjct: 183 EARIAELRTHFALLQADIK----------RKKAALELARLN-----LSYTVIRAPYSGR- 226

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           +  ++       Q  QPL+ I+ + K  +I A     Q+  +  G +  +R         
Sbjct: 227 LGRKNILEGQQIQPGQPLVSII-NEKQKWITANYKETQVADMYVGQSVEIRVDAIDGKVF 285

Query: 361 K-KFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFT 416
             +  AI        S    +  T  + ++   + +           +  G    V   
Sbjct: 286 PGRIMAIAGSTGARFSLLPPDNSTGNFVKIIQRVPVKIAFEGPGTGNVVAGMNVTVAVK 344


>gi|153002349|ref|YP_001368030.1| secretion protein HlyD family protein [Shewanella baltica OS185]
 gi|217974936|ref|YP_002359687.1| secretion protein HlyD family protein [Shewanella baltica OS223]
 gi|151366967|gb|ABS09967.1| secretion protein HlyD family protein [Shewanella baltica OS185]
 gi|217500071|gb|ACK48264.1| secretion protein HlyD family protein [Shewanella baltica OS223]
          Length = 352

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/328 (18%), Positives = 112/328 (34%), Gaps = 31/328 (9%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC-SKVFNYGISSVYRSLKM 166
            +++ + S +      Y VL    +++  Q  + L +      S   +   +S+  S   
Sbjct: 37  AYVEADISHISVKVPGYVVLSDVTDNQHVQKGELLAQLEDNQFSAKVSQAEASLASSKAD 96

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLS---SHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
             T    + L R  +   S+ + A  S     Q+ L+  K L   N  SQ+D++Q +   
Sbjct: 97  LQTLAAKVELQRALITQASAGVVAAESDKIRAQQQLSRSKKLKVSNYSSQDDVDQLQAGF 156

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +   L E         R +                  +  L+Q         + L + 
Sbjct: 157 DSAAARLDEAKAVLVAKQRELAV---------------FNAQLDQAGSVVEQADATLELA 201

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +       + +P +G I   +      Y Q  Q L  +VP     +I A     QIQH++
Sbjct: 202 KIQLNDTRVTAPFSGVI-GKRGAMVGQYVQPGQALYSLVP-DGAVWITANFKETQIQHMQ 259

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DL 396
            G +  V    + D   K F  +I+ + P    +         T  + +++ +I     L
Sbjct: 260 PGQSVQVSLDAFPD---KTFIGVIDSLSPASGAKFSLLPAENATGNFTKIVQRIPVRIRL 316

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             S+    +  G  A V     + T   
Sbjct: 317 DLSEEEAHMLPGLSAVVKVDTASGTAIS 344


>gi|153956107|ref|YP_001396872.1| hypothetical protein CKL_3510 [Clostridium kluyveri DSM 555]
 gi|219856440|ref|YP_002473562.1| hypothetical protein CKR_3097 [Clostridium kluyveri NBRC 12016]
 gi|146348965|gb|EDK35501.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219570164|dbj|BAH08148.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 372

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 131/360 (36%), Gaps = 50/360 (13%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK  +VE G+++  G  +   +  E T  ++   +S++N    +             
Sbjct: 56  SGKIKDIKVEEGTKVKSGDIIAVLDSDENTINVNQANISLQNAENELGKINDG------- 108

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                    +R E++        +   ++     S V +      T   ++   + + + 
Sbjct: 109 ---------TRIEEI--------NAQKELVKQSESLVTQGEAALETSQNNLNSAQTNYDY 151

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K  +    L+ ++K     +NL +     +NDL+  +  +  +   L     + ++    
Sbjct: 152 KKKIYDDHLTLNEKGYESNENLDKY----KNDLDNAQTALNNTKSALSSANAQLESYKAQ 207

Query: 244 INELYDEANL--EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           +    D+ +L    A    E +     +Q      +SK+       E+  I +   G + 
Sbjct: 208 LAAATDKLDLLVNSATARDEATAKYGIDQAQQNIALSKIA-----LEKSNIKASSDGIVE 262

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
               F    Y     P++ ++  S   YI+  V  K + +VK     T++      I++K
Sbjct: 263 TVN-FKKGEYVSLGSPIITLL-DSNNMYIKIYVPEKILPYVKLNKEVTMKS---DFIKDK 317

Query: 362 KFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             K  +  I         N+ T+E      YEV +KI+D     N   +++G   +V   
Sbjct: 318 VIKGKVCYISKEAEFTPMNIVTKEDRMKLVYEVKIKISD-----NLETVKSGMLLDVTLK 372


>gi|258648985|ref|ZP_05736454.1| putative ABC transport system, lipoprotein [Prevotella tannerae
           ATCC 51259]
 gi|260850597|gb|EEX70466.1| putative ABC transport system, lipoprotein [Prevotella tannerae
           ATCC 51259]
          Length = 297

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 91/277 (32%), Gaps = 39/277 (14%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            GK      +V       +    +       S    R D+  + +  R  LS  + +   
Sbjct: 53  EGKLVEAHQQVGLIDTVQLQLKARQIGATRESFAEQRPDISAQIAATRQQLSKAELEQKR 112

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              LF   A ++   +     V     +L   I    N  R +N     A ++    L  
Sbjct: 113 TAALFADGAATRKQTDDASNAVRVLQSQLNAQISALSNSTRSLNSQVSGAEIQRLQVL-- 170

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
                                     ++  I SPIAGT++  +      +A   +PL K 
Sbjct: 171 -----------------------DQLKKCHITSPIAGTVLE-KYAEQGEFATIGKPLFK- 205

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ---- 377
           V  ++  +IRA +T +Q+  VK G    V F +Y     + +   +  I P         
Sbjct: 206 VADTRHMFIRAYITSRQLAQVKLGQRVKV-FSNYGSDTRRSYSGTVTWISPNAEFTPKSI 264

Query: 378 -DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             ++ +    Y V + + +  +      L+ G   EV
Sbjct: 265 LTDDERADIVYAVKIAVINDGY------LKMGMYGEV 295


>gi|198283118|ref|YP_002219439.1| secretion protein HlyD family protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|198247639|gb|ACH83232.1| secretion protein HlyD family protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
          Length = 389

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/433 (12%), Positives = 117/433 (27%), Gaps = 103/433 (23%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL-----NEDNVVEIKSPFSGIIKK 69
              + + L+++I ++  + W+    +         I         N+  + S  +G I +
Sbjct: 17  KRTRLLVLVTLIFVLAGLIWAAWWFL----RGQYWIETNDAYVSGNITPVDSQTAGTISR 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             VEN   +  G  +                 +++  R  I  +++              
Sbjct: 73  VLVENTEFVRAGQVM----------------ATLQAHRSQIALQQAGAH----------- 105

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                                             L   + ++R  +     L+   S   
Sbjct: 106 ----------------------------------LAATVRQVRRDFAKVTALQQTVSAKN 131

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L     D    K      AVS   L   +  +  +T ++       K     I     
Sbjct: 132 AELRKLNADFIRYKQSLPSGAVSAIRLEDTQNEIAAATAQVAAAQAALKGTQAIIAGTTL 191

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           + N        +  +                   +   +++ + +P++G +     +   
Sbjct: 192 QTNPLVRQAAAQFEQ------------------ADIQWQRRVVRAPVSGYVAERTVY-PG 232

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY--ADIREKKFKAII 367
                 Q L  +VP + L  + A V    ++HV  G    +   +Y        +   ++
Sbjct: 233 LMVHPDQRLFSVVPLNDLWVV-ANVKETAMRHVHPGQCVQLTSDYYGGDVRYHGEVLGLL 291

Query: 368 EKIDPIISQQDNNLQTQEYY----EVILKITDLAFSDNNIELRNG--FPAEVL-FTAKNT 420
                          T  Y      V ++I   A       LR G    A +    ++  
Sbjct: 292 PGAGSAFGILPPENATGNYIHIVERVPIRIALSAAELAQYPLRPGLSMVAGIHWTRSQKH 351

Query: 421 TLAQEIIHPITDN 433
           ++      P+T  
Sbjct: 352 SVL----KPLTTT 360


>gi|218132448|ref|ZP_03461252.1| hypothetical protein BACPEC_00307 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992558|gb|EEC58560.1| hypothetical protein BACPEC_00307 [Bacteroides pectinophilus ATCC
           43243]
          Length = 549

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/400 (12%), Positives = 129/400 (32%), Gaps = 65/400 (16%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-----IDTEKSALDF 119
           G + +   + G ++  G  L   +D      I LK+ S+ N          D +KS  D+
Sbjct: 74  GEVTQVYFKEGDEVKAGDVLAQIDDKTIRQNIALKEASLSNTELSNYYAIRDAKKSYEDY 133

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS---SVYRSLKMKLTRMRSIYL 176
            N+  +         +  L +    Y S  S      +    ++  S+     ++ S+  
Sbjct: 134 KNSIDNGDNATINQAKAALDNAKTAYDSAVSDYNRAKLELDNNIDASMIAAGNQLESVKA 193

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFE-----------KNAVSQNDLNQQERIVYK 225
                +       A +   +K ++  ++ ++             A +  ++ + +R   +
Sbjct: 194 ALEQAKKNYDDNEADIRGCEKGVSNAEDAYDADPSPANAASLAGAKANVEMLEAKRDALQ 253

Query: 226 STLELRE-------------------NIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           + ++  +                   N+ + ++ +   +E Y +A   + + L    + L
Sbjct: 254 TAVDNAQLSYDNQYKSYLSTFNTVNTNLSKYEDAVNSRHESYLQAQQSYESALVAADQTL 313

Query: 267 EQNQRTFADEMS----------KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            Q     A+++           +L  L    E   I + I+GT+         +    ++
Sbjct: 314 -QTYANAAEKVEALSNNNVAALELDNLYTQLEDYKIKASISGTLTDFNV-KVGDTLSTAK 371

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            + ++        +  K+    I  V+ G    +          + ++  I  +     +
Sbjct: 372 AVAEVT-DYSTVQVSIKIDEYDILGVEDGVDVGISVDALK----RDYEGKITNVS----K 422

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +    +   Y+   ++         +  +R G   EV   
Sbjct: 423 KATVEKGVSYFTADVE------FRADSYIRTGMSVEVKLK 456


>gi|29349697|ref|NP_813200.1| putative hemolysin secretion protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29341607|gb|AAO79394.1| putative hemolysin secretion protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 416

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/361 (12%), Positives = 121/361 (33%), Gaps = 24/361 (6%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++ +G  +   ++  +T+ +      I +L   ID + + L  L + +       E   
Sbjct: 65  EEVKKGEYIAVVQNPASTEDVR----KIADLINRIDFDGTHLLALKDTFPDKVYLGEINP 120

Query: 136 E---QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +    L     +       V+     ++  S++ K   +R    ++   +++  + R  L
Sbjct: 121 QYYAFLAALKAQCDYLQQNVYEKQRENITTSIEWKKKIVREAEDSQKAAKDRMDVARKWL 180

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
             +           ++ A  + + +Q +     +  E++    E  +    I E Y    
Sbjct: 181 KRYVSLDQ------QEIATYEYETDQIKNNYLTTVQEVQNINREIASTRMQITEAYHRLE 234

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                 L++      +   T  + ++ +   E+        +P  G + + +  S   + 
Sbjct: 235 QLEVEQLEKERELKVELLSTHQNLIANMAAWEQK---YVFKAPFDGKVEFLKFISDGQFV 291

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           Q  + +  ++P     Y +  +       VK+     ++  +Y  +     +  +  I  
Sbjct: 292 QAGEAVFGVIPKENHIYGQVLLPANGAGKVKENSKVVIKLENYPYMEYGYIEGYVSSISL 351

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIEL-----RNGFPAEVLFTAKNTTLAQEII 427
           +   Q    +T E Y + +++ +   ++    L       G         K+  L + + 
Sbjct: 352 VTQTQKTGEKTIETYLINVELPNGLTTNYEETLDFKYELGG---TADIIVKDRRLIERLF 408

Query: 428 H 428
            
Sbjct: 409 D 409


>gi|255533013|ref|YP_003093385.1| RND family efflux transporter MFP subunit [Pedobacter heparinus DSM
           2366]
 gi|255345997|gb|ACU05323.1| efflux transporter, RND family, MFP subunit [Pedobacter heparinus
           DSM 2366]
          Length = 416

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 75/223 (33%), Gaps = 30/223 (13%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE--------- 261
           V +  L  Q   + K+ ++   +           N+ Y +AN      L E         
Sbjct: 81  VKKGQLLAQ---LDKTLIQTTVDQARASVAQAQSNQAYQQANFNRQKQLFETGSISRADY 137

Query: 262 --ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---Q 316
                +L+    +  +  ++L   E+      I SPI G ++  +S S       S    
Sbjct: 138 DQALNNLQVATASVNNARAQLRSAERNLSFTQIYSPIDGVVLG-RSVSIGQTVAASFNTP 196

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +  I        ++AKV    I +V KG  AT     + D     F   ++ I     Q
Sbjct: 197 TIFSIAKDITKMQVQAKVDEADIGNVAKGQRATFTVDAFIDDT---FNGTVKDI---RLQ 250

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              +     Y  +      +   ++N +L+ G  A ++   K 
Sbjct: 251 PSISSNVVTYATL------IDAPNDNKKLKPGMTANIIIYTKE 287



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 62/180 (34%), Gaps = 34/180 (18%)

Query: 15  ASLKRMTLLSIIGIIGLITWSIL-----------------LPIEISVSSSGEILNEDNVV 57
            S K + +++ + ++  + W                     PI  SV+++G +   D V 
Sbjct: 2   KSRKTILIIASVIVVLGLIWYFFLRTKEQPVVLSQEKPTIGPISSSVTATGTVQPVDTV- 60

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            + +  SG I     +  S + +G  L   +       +D  + S+   + +        
Sbjct: 61  IVGTQVSGTISALYADFNSTVKKGQLLAQLDKTLIQTTVDQARASVAQAQSN-------- 112

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                     ++A  +R++QL +      +   +  N  +     S+     ++RS   N
Sbjct: 113 -------QAYQQANFNRQKQLFETGSISRADYDQALNN-LQVATASVNNARAQLRSAERN 164


>gi|94970558|ref|YP_592606.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
 gi|94552608|gb|ABF42532.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
          Length = 400

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 68/386 (17%), Positives = 128/386 (33%), Gaps = 105/386 (27%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  SV ++G++     V EIKS  SGI+KK        +  G                  
Sbjct: 51  LAKSVVATGKVEPITKV-EIKSKASGIVKKLY------VEYGD----------------- 86

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           KV    L   +D             D +     S++ QL       H+  +      + +
Sbjct: 87  KVKAGQLLAELD------------KDEIIAQVRSQKAQLESAESNMHAAEADYERSKVDA 134

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
               +                             + Q+     K++ +   VSQ+ L+  
Sbjct: 135 AGVDIP----------------------------TLQRAYERAKSMAKDGVVSQSALDDS 166

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +R    +T   ++N+   +  +    E   +A             D+++ Q T A    +
Sbjct: 167 QRAYEMATN--KQNVARAQVTVNKAKEAQAQA-------------DVQKAQATLAQLNEQ 211

Query: 280 LTILEKTREQKTILSPIAGTI------VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           L+         TI++PI G +      V +   S       +  +M +   +   Y++ K
Sbjct: 212 LS-------YTTIVAPIDGIVLSRDVEVGDAVSSILVLGSSATLVMTLG-DTSEVYVKGK 263

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    I  V  G  A ++   + D   K F+  + KI P+  ++DN       +EV + I
Sbjct: 264 VDESDIAKVYIGEAARIKVESFKD---KTFQGKVTKISPMGVEKDNVTT----FEVRVSI 316

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN 419
                ++   EL+    A      + 
Sbjct: 317 -----NNPGGELKAAMTANAEIILEE 337


>gi|329894647|ref|ZP_08270452.1| secretion protein HlyD family protein [gamma proteobacterium
           IMCC3088]
 gi|328922903|gb|EGG30232.1| secretion protein HlyD family protein [gamma proteobacterium
           IMCC3088]
          Length = 323

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 103/272 (37%), Gaps = 31/272 (11%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++    I +  R+  + +TR +S      +LE + +LL   L   +++    K+L  K  
Sbjct: 70  ELRAQQIEAEQRAFAIDITRKKSALN---ELEAQKALLLEDLRYAREEWQREKDLTAKGL 126

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            +++DL  ++  + ++   +     +    L  +    D A                ++ 
Sbjct: 127 NAEHDLAVKQHDLQRAERAITVIEADIATALSELLGQTDLA---------------VEDH 171

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            T+    S+L   ++      + SPI+G ++         +A++ +P+  +V  +   ++
Sbjct: 172 PTYKALQSQLDQAKRDVANTVVRSPISGMLIEKPV--LGTHAERGRPITSVVDINN-LWV 228

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A      +  +  G  A V    Y D   K +K  +  + P    +   L  Q      
Sbjct: 229 EANFLETDVARLTPGLLAEVHIDTYPD---KVWKGRVASLSPATGAEFAILPPQNATGNW 285

Query: 391 LKIT-------DLAFSDNNIELRNGFPAEVLF 415
           +KIT       +L  S     LR G  AEV+ 
Sbjct: 286 VKITQRIPVRVELESSHAGTVLRKGMTAEVVV 317


>gi|307700678|ref|ZP_07637703.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
 gi|307613673|gb|EFN92917.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
          Length = 752

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/293 (11%), Positives = 93/293 (31%), Gaps = 12/293 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +     +      ++  R       +AL   +   D+   +  S +  L     +     
Sbjct: 255 VTQEAALRTAYQEVEKTRMSASRIGAALKEADRMRDLESISLASDKADLALRQKELQKAQ 314

Query: 150 SK--VFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           +   +     + V  +L+ ++  +  +        +          S  +++   ++   
Sbjct: 315 NDSSLSKEKKAEVINALQWEINHLTEVIAEGEAKTQAAKEKYDTAWSQEKENKLKIRQAT 374

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE--LYDEANLEFANYLKEISR 264
           E   +++         V +   + ++ +   ++ +   N      EA  +  N   + + 
Sbjct: 375 ENLGMARRQYRLALLKVDRELADAQDAVARAQDGILDANAGLQQAEATAQLQNRTNQRAI 434

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +  ++  T A     +  L       T+ +P+ G I    +         +Q  + +V  
Sbjct: 435 ETARSGATNAQGQQAIAKLRADINSATVRAPMTGVITSVTAK----VGSPAQGALFMVED 490

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++   ++  V  K +  +  G   T + P   D +       +  I P  S+ 
Sbjct: 491 NQNLLVKTAVKEKDVAKLSVGQQVTFKTPATGDKKY---TGTVTFISPAASRD 540


>gi|218133757|ref|ZP_03462561.1| hypothetical protein BACPEC_01626 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991132|gb|EEC57138.1| hypothetical protein BACPEC_01626 [Bacteroides pectinophilus ATCC
           43243]
          Length = 568

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 67/409 (16%), Positives = 131/409 (32%), Gaps = 59/409 (14%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG +    +   IK   S  +    V  G ++ +G  + T +D E    I  ++ S+ N 
Sbjct: 60  SGNVEAVSDA-TIKPKVSKTVTAVNVSIGDEVKKGDVIATLDDSEIQRSIKKQEASLSNT 118

Query: 107 RCH----------------IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             +                 D E      + +  + +E A  S E+    +        +
Sbjct: 119 ELNNFYSIRDSQKKYDNYKADLENGQNSQIMSAANSVENARTSYEQAKETYERNKMELEN 178

Query: 151 KVFNYGISSVYRSLKMKLT-------------RMRSIYLNRLDLENKSSLLRALLSSHQK 197
            + +  ISS  +    K               ++R       + E+      +  ++ QK
Sbjct: 179 NMDSSVISSNQKVASAKQALDDANQDYADNEAKIRGYDKGVANAESIYGEDSSEAANAQK 238

Query: 198 DLTMMKNLFE--KNAVSQND------LNQQERIVYKSTLELRENIHEQKN---MLRHINE 246
           +L   +   +  + A+          +N      Y S + L  +    +      +    
Sbjct: 239 ELESAEEKSDSLQKAIDNAQTNYDNAVNDLLMSYYTSNVNLNSDYENMQQKYTAYQQAQA 298

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMS--KLTILEKTREQKTILSPIAGTIVYNQ 304
            Y+ A       L++ +  LE+ Q T     +  +L  L    E   I +PI G I    
Sbjct: 299 SYEIAVKSAGETLQDYADSLEKTQATSNTTTATVELEALYDQLEDYKITAPIDGVITVLN 358

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                + A  S    ++  +     ++ K+    I  +  G   TV          K +K
Sbjct: 359 IN-VGDSASTSDTAAEVT-NYDKMKVQIKIDEDNISALDNGTEVTVSVDALN----KTYK 412

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             IE +    +  +N      Y+   +            ++R+G  AEV
Sbjct: 413 GTIENMSKKATVSNN----VSYFTADVTFDADD------DIRSGLSAEV 451


>gi|148558373|ref|YP_001257184.1| HlyD family secretion protein [Brucella ovis ATCC 25840]
 gi|148369658|gb|ABQ62530.1| HlyD family secretion protein [Brucella ovis ATCC 25840]
          Length = 413

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 88/289 (30%), Gaps = 28/289 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 137 IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 196

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++   L     +  +   +I             
Sbjct: 197 TMARVQKLHETRFVAQSELDNAQSALDQARARLAGADAQIASAKANI------------- 243

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
               +     +   +            +     ++ +   G I  N S    +     Q 
Sbjct: 244 --SVLEAQYNEAASSTKSLELARDKAARDLSFTSLRALFDGVI-GNLSGKKGDLVAPGQK 300

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P     
Sbjct: 301 IAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAV 356

Query: 375 -----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +      T+    V ++IT    +  + ++R G    V    +
Sbjct: 357 FSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDTR 405



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 66/257 (25%), Gaps = 7/257 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +   +  +    +D     +       +
Sbjct: 105 VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 164

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 165 RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSALDQ 224

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+          +   S+L A  +        ++ L    A           +    
Sbjct: 225 ARARLAGADAQIASAKANISVLEAQYNEAASSTKSLE-LARDKAARDLSFTSLRALFDGV 283

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L     +     + I  L     L      KE      +   T    +  +   +  
Sbjct: 284 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETQLAHIKVGETAHIYVDAIDGTKFD 343

Query: 287 REQKTILSPIAGTIVYN 303
            +  +I +P +G +   
Sbjct: 344 GKVASI-APASGAVFSL 359


>gi|150397993|ref|YP_001328460.1| secretion protein HlyD family protein [Sinorhizobium medicae
           WSM419]
 gi|150029508|gb|ABR61625.1| secretion protein HlyD family protein [Sinorhizobium medicae
           WSM419]
          Length = 402

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 72/253 (28%), Gaps = 14/253 (5%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
             L     + + +  +A L+  +     ++       ++Q   ++ +   + +   L   
Sbjct: 144 QKLALSRFDAQIAGAKASLTQTEAQKKALEATVRGAELAQRRASELQSKSFGTDASLDSA 203

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                    ++           AN    +     + + T            +      + 
Sbjct: 204 QVALDQARANLAGAEANIAAAKANITV-LEAQRNEAESTIHSLELARDKASRDLGFTVLK 262

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G I  N +    +     Q L  +VP     YI A     QI H+  G    +   
Sbjct: 263 APYDGVI-GNVAVQVGDLVSAGQRLAALVPTD-QLYIDANFKETQIAHLVPGSKVEIHVD 320

Query: 354 HYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            Y D      +  +  I P          ++      T+    V ++IT  A       L
Sbjct: 321 AYEDR---PIEGTVASISPASGSVFSLLPAENATGNFTKVIQRVPVRITLPADVLAEGHL 377

Query: 406 RNGFPAEVLFTAK 418
           R G    V    +
Sbjct: 378 RAGLSVVVDVDTR 390



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 84/262 (32%), Gaps = 19/262 (7%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-- 110
           E ++  I    SG I K  V     +  G PL+T +D +     +  +  I   +  +  
Sbjct: 91  EGDIATISPKVSGYIAKVDVVANQHVKAGDPLVTLDDGDYRIAAEQAEAQIATQKLALSR 150

Query: 111 -DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLKMK 167
            D + +       + +  +KA E+          +     SK F  +  + S   +L   
Sbjct: 151 FDAQIAGAKASLTQTEAQKKALEATVRGAELAQRRASELQSKSFGTDASLDSAQVALDQA 210

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              +     N    +   ++L A  +  +  +  ++ L    A         +       
Sbjct: 211 RANLAGAEANIAAAKANITVLEAQRNEAESTIHSLE-LARDKASRDLGFTVLKAPYDGVI 269

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             +   + +  +  + +  L     L        I  + ++ Q       SK+ I     
Sbjct: 270 GNVAVQVGDLVSAGQRLAALVPTDQL-------YIDANFKETQIAHLVPGSKVEIHVDAY 322

Query: 288 EQKTI------LSPIAGTIVYN 303
           E + I      +SP +G++   
Sbjct: 323 EDRPIEGTVASISPASGSVFSL 344


>gi|322508531|gb|ADX03985.1| Putative RND family drug transporter [Acinetobacter baumannii
           1656-2]
          Length = 334

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/411 (13%), Positives = 122/411 (29%), Gaps = 88/411 (21%)

Query: 21  TLLSIIGIIGLITWS---ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            +++ I ++  I W    I LP  I  +    +  E +   I    SG I++  +++   
Sbjct: 1   MVIAFIIVLVSILWILKVIFLPSSIVKTDDARVDVEYS--TIAPKVSGNIEEIYIKDHQT 58

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L                         ID                       +  
Sbjct: 59  VKKGQLL-----------------------ARIDAR-------------------DYQAA 76

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L +    Y    + +    ++   +   ++            + E +   + A +   + 
Sbjct: 77  LAEAESNYAKAQADLNEAMLAVERQPTVIR------------ETEAQLRKVEAGIKLTKD 124

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +    + L    A S+    Q +  + +   +L  +  +  +    +N+   +   + A 
Sbjct: 125 NTARYEQLQALGAESRLITQQSKTTLTEQYADLDSSKEKVIDAQYQLNQYKIQVQAKQAA 184

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
             +  +                    +       I +PI G I   +S +  N+     P
Sbjct: 185 LKQAQAAL---------------DKAKLNLSYTEIRAPIDGMI-GQKSANVGNFVGAGNP 228

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK-------- 369
           LM +VP     Y+ A     +++ +K G   TV    Y      + K +++         
Sbjct: 229 LMVVVPLD-QVYVEANFREIELKQIKIGQPVTVYVDAYN----VELKGVVDSFSPSTGAF 283

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             PI +       T+    + L+I  L    +   LR G    V       
Sbjct: 284 FSPISATNATGNFTKIVQRLPLRIKLLENQPDIKLLRPGLSVVVSVDTTKK 334


>gi|295676265|ref|YP_003604789.1| efflux pump membrane protein [Burkholderia sp. CCGE1002]
 gi|295436108|gb|ADG15278.1| efflux pump membrane protein [Burkholderia sp. CCGE1002]
          Length = 413

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 85/271 (31%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R ++ +    E + +  +A LS  Q DL     + +  AVSQ
Sbjct: 97  RVALEQAEANLAQVVRQVRGLFADDSQYEARVAASQADLSRAQDDLKRRMTVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A      +     N    
Sbjct: 157 EE------------------ISHARDAVKSAQAALDAAKQQLAANRALTANTTIANHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +KL        + T+ +P+ G +   +S           PLM IVP     ++ A 
Sbjct: 199 QAAAAKLRDAYLNHARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMAIVPLHD-VWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRIGQPVELTADVYGSSVPYHGKVIGFSAGTGSAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V + +       + + +     A+V   
Sbjct: 317 RLPVRISLDPQELEKHPLRIGLSMQADVNIK 347



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 67/186 (36%), Gaps = 6/186 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSS-SGEILNEDNVVEIKS 61
                    N+    + MTLL I+ +I  + + +   ++      + +     NVV+I  
Sbjct: 6   QPATPPQAANNGKRKRMMTLLVIVILIAAVAYGLYYFLDARFHEDTDDAYVSGNVVQITP 65

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             +G +     ++   +  G PL+  +  +    ++  + ++      +  +   L   +
Sbjct: 66  QVTGTVIAVNADDTQVVKAGDPLVVLDPADARVALEQAEANL----AQVVRQVRGLFADD 121

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++Y+    A ++   +  D L +   T ++        +  +     +   ++   +  L
Sbjct: 122 SQYEARVAASQADLSRAQDDLKRRM-TVAQTGAVSQEEISHARDAVKSAQAALDAAKQQL 180

Query: 182 ENKSSL 187
               +L
Sbjct: 181 AANRAL 186


>gi|222054876|ref|YP_002537238.1| secretion protein HlyD family protein [Geobacter sp. FRC-32]
 gi|221564165|gb|ACM20137.1| secretion protein HlyD family protein [Geobacter sp. FRC-32]
          Length = 336

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/351 (13%), Positives = 105/351 (29%), Gaps = 78/351 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V+ G  +  G  L   E  + +  +             ++ ++S ++      
Sbjct: 51  GRVKSRLVDEGETVRVGQVLALLEPEDLSHDV-----------ARLEADRSVMEA----- 94

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                            L +  +   +       +     + +  R+             
Sbjct: 95  ----------------SLAELEAGSRREEIAQAQAAAARAEAEANRL------------- 125

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                      +K+    K LF +  +SQ  L+        S    R  + E +  L  +
Sbjct: 126 -----------EKEYQRDKALFAREVISQRQLDASGTAFETS----RAAVSEAREGLALV 170

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +                   ++Q +    +  + L   E      T+ SPI+G ++   
Sbjct: 171 RKGPR-------------REKIDQARGRLKEAQAALAQAETRLGYATLTSPISGLVLSKH 217

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +           P++ +   +     RA ++   +  VK G    V+   Y     +   
Sbjct: 218 A-EPGELVAAGTPVVTLGDITDTWL-RAYISETDLGRVKVGQAVLVKVDTYPGRSYR--- 272

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  I P       N+QT++    ++    +   +  +EL+ G PA+   
Sbjct: 273 GKVTFISPEAEFTPKNVQTEKERVKLVYRIKITVPNPQMELKPGMPADAEI 323


>gi|320333508|ref|YP_004170219.1| RND family efflux transporter MFP subunit [Deinococcus maricopensis
           DSM 21211]
 gi|319754797|gb|ADV66554.1| efflux transporter, RND family, MFP subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 464

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 82/284 (28%), Gaps = 25/284 (8%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +   D      +          + +      + +       + +            + + 
Sbjct: 107 QVQADAAATAVTNARLALQKAQAQLASVRAAQASTRAQNASSTVQASVSVQNAERDVQTA 166

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +  L     L+    VS+  ++     + K+   L      Q   L+ ++          
Sbjct: 167 RTALDAQTRLYSVGGVSRVSVDDARAALAKAQATLATARAAQAATLQGLDAQTASN---- 222

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                  S DL+  Q       + L   E T     + +P  GT+      S       +
Sbjct: 223 -------STDLQNAQIAVDQARADLQDAETTVAGTKLYAPFDGTVSVVNG-SVGGAVNAN 274

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ I+   +   +  ++   QI  V+ G  A +      D     F   + ++ P  +
Sbjct: 275 TALVTII-DDQTVDLPVQIDETQIGSVQVGQRADITLDALEDQ---SFTGTVTRLSPAAT 330

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           Q         Y+   +++      + +  LR G  AE     + 
Sbjct: 331 QDS----GISYFTATVQV-----RNPDGLLRPGMTAEADIVQQE 365


>gi|302390684|ref|YP_003826505.1| efflux transporter, RND family, MFP subunit [Thermosediminibacter
           oceani DSM 16646]
 gi|302201312|gb|ADL08882.1| efflux transporter, RND family, MFP subunit [Thermosediminibacter
           oceani DSM 16646]
          Length = 414

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/367 (10%), Positives = 97/367 (26%), Gaps = 92/367 (25%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +     V  + +  SG ++   V+ G ++  G  L+  E  +           +   
Sbjct: 55  PGTVEAAGQV-TVTAKMSGRVEAVLVKAGEKVKAGQVLVRLEQQDVKS-------QVDQA 106

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +   +   +  + +N+                                            
Sbjct: 107 KAGYEAALANYNKINS-------------------------------------------- 122

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                  +      LE+          +  ++   M  L++  A+S+       R     
Sbjct: 123 ------QLEQEVQRLESALKQAEENYKNTAQNYERMSGLYQDGAISK-------REFEGI 169

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            L+ +    + ++    +    ++A          +   +   +       + L+  +  
Sbjct: 170 ELQYKIAKEQYESARVQLEMTKEKA----------VPGTVAAAKAQVEQAKAALSAAQSA 219

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            E   I +PI G +V               P+  +  ++    ++  V+   I  VK G 
Sbjct: 220 LESTLITAPIDG-VVGAVDVKVGQLITPGIPVATLG-NTGSMVVKINVSEDVINSVKTGQ 277

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              V             +  +  + P    +         Y V + I+          ++
Sbjct: 278 KVEVAIEA----AGVNLEGTVTSVSPYKDARTGT------YPVEVNIS-----GAGETVK 322

Query: 407 NGFPAEV 413
            G  A V
Sbjct: 323 PGMFARV 329


>gi|73538314|ref|YP_298681.1| secretion protein HlyD [Ralstonia eutropha JMP134]
 gi|72121651|gb|AAZ63837.1| Secretion protein HlyD [Ralstonia eutropha JMP134]
          Length = 358

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/419 (13%), Positives = 116/419 (27%), Gaps = 79/419 (18%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGE--ILNEDNVVEIKSPFSGI 66
           +       ++ + L +I   +G++ W+    +    S+          +   +    +G 
Sbjct: 1   MSSATRPPIRNIRLAAIFIAVGIVAWAC-ATLVPGSSAQSTNDAYVTADFTLVAPRIAGQ 59

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V++   +  G  L+  +D                                     
Sbjct: 60  ISEVLVDDNQWVKAGQVLVRIDD------------------------------------- 82

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                        DF     S  + V      ++  +   ++ R  S+         K  
Sbjct: 83  ------------RDFRAALQSAQADVLAA--KAMVANYDAEIARHPSLVEQ---ARAKLR 125

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              A +   + + +  +NL E  A         E+   +++  L E + +Q      ++ 
Sbjct: 126 SDEASVEFARANASRYRNLSEAGA-------GTEQEQQRASSTLAEQVAQQSRDRAALST 178

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                       L  ++   ++     A   + L           I +P+ G I   +S 
Sbjct: 179 T--------EQNLMVLNTQRDKAAGALARAEAALEQARLNLSYAEIHAPVDGKI-GRRSA 229

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-----REK 361
               Y      ++ IVP S    + A     QI  ++ G +A ++      +        
Sbjct: 230 RVGAYVTAGASVLAIVPVSDAYVV-ANFQENQIAGMRPGQSARIKVDSLPGVEIQGHIHS 288

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              A      PI         T+    V +KIT          L  G   EV       
Sbjct: 289 LAPATGVSFAPIAPDNATGNFTKIVQRVPVKITIDRGQKAASGLSVGLSVEVDVAIARR 347


>gi|304317967|ref|YP_003853112.1| efflux transporter RND family, MFP subunit [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779469|gb|ADL70028.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 415

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 128/384 (33%), Gaps = 91/384 (23%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + L  IE   + +G I +E+++  + S  SG +K+   + GS + +G PL+  +      
Sbjct: 49  AELNKIENYSTYTGVITSEEDIK-VSSKISGKVKEVNFQVGSYVKEGDPLIVLDT----- 102

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
                                                     +L   L +  ++      
Sbjct: 103 -----------------------------------------NELNIQLAQAKASLDAAEA 121

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              ++ Y +L  +L + ++ Y          S   +   + + +   +K+L++  A S+ 
Sbjct: 122 NLAANEYGNLPQELAQAKTAY----------SQAESNYLNAKSNYDRVKSLYDAGATSKQ 171

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L+  +     +                     Y+ A  +     K+   +L+  Q    
Sbjct: 172 SLDSAQLQYQTA------------------ESQYENAKEQLDIIQKKQPENLKALQSQVE 213

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++ + E   +   I +PI+G I   Q  +     Q    L+ I  +     +   V
Sbjct: 214 QAQAQVELAETNVQNGIITAPISGIITSKQIDA-GEMCQAGTTLLTIA-NMNNVNVVINV 271

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               I ++K G  A V      +      K  I +I P  SQQ         ++V + + 
Sbjct: 272 PEDDINNLKVGQDALVSVDAINNGN--NLKGKISEISP-SSQQSGI------FQVKISLD 322

Query: 395 DLAFSDNNIELRNGFPAEVLFTAK 418
                + +  L++G  A+V    +
Sbjct: 323 -----NKDNLLKSGMFAKVSIVTE 341


>gi|253569937|ref|ZP_04847346.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251840318|gb|EES68400.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 414

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/362 (12%), Positives = 122/362 (33%), Gaps = 26/362 (7%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++ +G  +   ++  +T+ +      I +L   ID + + L  L + +       E   
Sbjct: 63  EEVKKGEYIAVVQNPASTEDVR----KIADLINRIDFDGTHLLALKDTFPDKVYLGEINP 118

Query: 136 E---QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +    L     +       V+     ++  S++ K   +R       + E+     +  +
Sbjct: 119 QYYAFLAVLKAQCDYLQQNVYEKQRENITTSIEWKKKIVR-------EAEDSQKAAKDRM 171

Query: 193 SSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
              QK L    +L ++   + + + +Q +     +  E++    E  +    I E Y   
Sbjct: 172 DVAQKWLKRYVSLDQQEIATYEYETDQIKNNYLTTVQEVQNINREIASTRMQITEAYHRL 231

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                  L++      +   T  + ++ +   E+        +P  G + + +  S   +
Sbjct: 232 EQLEVEQLEKERELKVELLSTHQNLIANMAAWEQK---YVFKAPFDGKVEFLKFISDGQF 288

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  + +  ++P     Y +  +       VK+     ++  +Y  +     +  +  I 
Sbjct: 289 VQAGEAVFGVIPKENHIYGQVLLPANGAGKVKENSKVVIKLENYPYMEYGYIEGYVSSIS 348

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL-----RNGFPAEVLFTAKNTTLAQEI 426
            +   Q    +T E Y + +++ +   ++    L       G         K+  L + +
Sbjct: 349 LVTQTQKTGEKTIETYLINVELPNGLTTNYEETLDFKYELGG---TADIIVKDRRLIERL 405

Query: 427 IH 428
             
Sbjct: 406 FD 407


>gi|83591174|ref|YP_431183.1| secretion protein HlyD [Moorella thermoacetica ATCC 39073]
 gi|83574088|gb|ABC20640.1| Secretion protein HlyD [Moorella thermoacetica ATCC 39073]
          Length = 509

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/429 (13%), Positives = 108/429 (25%), Gaps = 115/429 (26%)

Query: 18  KRMTLLSIIGI--IGLITWSILLPIEI-------SVSSSGEIL---NEDNVVEIKSPFS- 64
           KR+  L  + +  I    W                 +  G I+   +    +E       
Sbjct: 16  KRIIWLVAVFLTLIIAAGWYWWARGHQKAPNFLTVTAGKGSIVETVSTSGKIEALHSIGL 75

Query: 65  -----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
                G IK   V+ G  +  G  L   +  +                            
Sbjct: 76  SFKNPGTIKAIYVKEGQSVKAGQLLALQDPTD---------------------------- 107

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                  LE   +  +  L + + K  S  +      ++     ++              
Sbjct: 108 -------LELQVKEAQANLDNAMAKLKSLQAGPLATDVAQAEAGVEQAQVE--------- 151

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
                         + Q  L   + L++  A+S+ DLN   +    +   L++     + 
Sbjct: 152 ------------YDNAQDTLKRDQALYDAGALSEVDLNNARKAEATAAANLKKAQAALEA 199

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           +                        D+   Q       ++L + +       I +P  G 
Sbjct: 200 LKNGSR-----------------PEDIAAAQAQVDAARAQLQLAQNNLAATEIRAPWDGI 242

Query: 300 IVYNQSFSSSNYAQQSQP--------LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           +              +          +  I P      +R +V    I  VK G      
Sbjct: 243 VTNVNG-QVGQRVGSNTSATDASNSFIFLISPE---LQLRVQVNEADINKVKVGQDVEFT 298

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
                D     FK  +  I P    Q   +   + Y+V++ + D   S     L+ G  A
Sbjct: 299 VNAQPDRT---FKGKVTAIAP----QAQTVSNIQLYDVLVNVGDAGAS-----LKAGESA 346

Query: 412 EVLFTAKNT 420
            V       
Sbjct: 347 SVTIIISRK 355


>gi|189468194|ref|ZP_03016979.1| hypothetical protein BACINT_04590 [Bacteroides intestinalis DSM
           17393]
 gi|189436458|gb|EDV05443.1| hypothetical protein BACINT_04590 [Bacteroides intestinalis DSM
           17393]
          Length = 344

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/401 (14%), Positives = 115/401 (28%), Gaps = 90/401 (22%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIK------SPFSGIIKKFQVENGSQILQG 81
           ++ L+  + L+ +       G +   DN    +      S   G IKK   +   ++ +G
Sbjct: 13  VVSLLLIAGLVWVCSHFVHLGSVAYTDNAQVKQLIVPVNSRVQGFIKKIYFDEYQEVRKG 72

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L   ED E    +   +                                         
Sbjct: 73  DTLALIEDSEFRFRLAQAEAD--------------------------------------- 93

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                      F   IS          T   +I ++   L+      +  L + +++   
Sbjct: 94  -----------FQNAISGKNAVATTVHTTQNNIAVSDAGLQEA----KVRLDNAEREYHR 138

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            KNL  ++AV++   +  +     S                   EL            +E
Sbjct: 139 YKNLLAQDAVTKQQYDAVQTDYEASKARY---------------ELLLRQRQSTTLVKQE 183

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            +  LEQ         + L +         IL+P  GT    +        Q  Q ++ I
Sbjct: 184 QTHRLEQTDAGIKLAQAALELARLNLSYTVILAPCDGT-TGRKDIQEGQLLQPGQTVVDI 242

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII------- 374
           V  ++   + A     Q  ++++G    +       I    FK I++ I           
Sbjct: 243 VDENERWVV-ANYKETQTTYIREGQPVEIEVDAVPGII---FKGIVKSISRATGASFSLL 298

Query: 375 ---SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +   N ++ ++   + ++ +     ++   LR G   E
Sbjct: 299 PQDNSAGNFVKVEQRVPIRIEFSTGNRPEDMERLRAGMNVE 339


>gi|284929788|ref|YP_003422310.1| multidrug resistance efflux pump [cyanobacterium UCYN-A]
 gi|284810232|gb|ADB95929.1| multidrug resistance efflux pump [cyanobacterium UCYN-A]
          Length = 479

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 108/331 (32%), Gaps = 23/331 (6%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           + ++G +   +++ +I   + G + +   + G ++ QG  L   E  E      +     
Sbjct: 60  IKANGVLEPVESI-DIGPKYPGRLVQLVTKQGEKVKQGQILAFMERAEIRTEGKIADAKY 118

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                 ++  +  +     +        E+R E++   L +      K            
Sbjct: 119 NQSLAEMEAARIRIPSEIQQAQAQFIKAEARLEEIKTKLEQASKRSPKKIEELK------ 172

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM---KNLFEKNAVSQNDLNQQE 220
                   + + L++ +L+  +S ++      Q+ +        L      +     + +
Sbjct: 173 --------KELVLSQSNLQLATSKMKRGEELLQEGIVNQNDFDKLVNDYHKATTIFLKNK 224

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             + + T      I++ +  +        EA +      K    +  + +       ++L
Sbjct: 225 TFLKQITNSQNLEINQLRQKVLQSKAEVTEAKIIVDERKKIAKNEFSRLESLINLSKAQL 284

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-SQPLMKIVPHSKLTYIRAKVTPKQI 339
             +    E   I SP  G +V  Q      +    S  L  ++  +K   + A++    I
Sbjct: 285 EQVVIKFEDTAIRSPYDGLVVK-QYAKPGEFINPISASLNSVISLAKGLKVIAEIPEIDI 343

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             V++    T+    Y     + F+  + +I
Sbjct: 344 NKVQENQLVTITSDVYP---GELFQGKVTRI 371


>gi|148658387|ref|YP_001278592.1| secretion protein HlyD family protein [Roseiflexus sp. RS-1]
 gi|148570497|gb|ABQ92642.1| secretion protein HlyD family protein [Roseiflexus sp. RS-1]
          Length = 477

 Score = 75.4 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/438 (12%), Positives = 128/438 (29%), Gaps = 79/438 (18%)

Query: 39  PIEISVSSSGEILNEDN---VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           PI++ V+  GE+ +  +     +++    G + +  V+ G  + +G  L   +       
Sbjct: 56  PIQLGVTGIGEVKSAQDANLSFQVQ----GTVAQVFVKEGDIVKKGDLLAILDTRAFDQQ 111

Query: 96  IDL--KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           ++     ++    +    TE      LN     + +A  + E        +         
Sbjct: 112 LEQAKAALANALAQEAALTEAPRQVDLNAARAAVAQAQAALEALQRGPKEQDIRMAEAAL 171

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +++  +            +         +  +A  +  + +    ++      V +
Sbjct: 172 AAAEANLQATRDRLSFAKTQAEIQMEQAAAALTQAQARYAQAKYNWEYARDTGNDPIVPE 231

Query: 214 ----------NDLNQQERI-VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
                     N L+  +R   Y   ++    + + +  L    +  + A       ++  
Sbjct: 232 VAAPNGQRVPNKLSDGQRENYYAQFVQAEAGLRQAEKALELAVKGAESARQAEVTGIRAA 291

Query: 263 SRDLEQNQRTFADEM--------------------------------------------- 277
              +EQ + T                                                  
Sbjct: 292 EAQVEQARLTLEKLRLPPDPDRLAAARAALAQARAQEARIVPDPRESQKAAARAAVEQAQ 351

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + LT+ +  RE+  + +P  G I             Q  P ++I+      Y+  +++  
Sbjct: 352 AALTLAQINRERAELRAPFDGVISIVSIDPGDPSVTQGLPAIQII-DMSSLYVDVQISDT 410

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I  V++G +A V      D         +E I P  + Q  +      Y V + + D+ 
Sbjct: 411 DIVRVREGQSAKVTVSSIPDREY---TGKVEFIAPTATVQGLSRS----YRVRIALDDIT 463

Query: 398 FSDNNIELRNGFPAEVLF 415
                  LR G  A V  
Sbjct: 464 ------GLRAGMSARVDI 475


>gi|88860909|ref|ZP_01135545.1| putative hlyD family multidrug secretion protein [Pseudoalteromonas
           tunicata D2]
 gi|88817122|gb|EAR26941.1| putative hlyD family multidrug secretion protein [Pseudoalteromonas
           tunicata D2]
          Length = 319

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 92/255 (36%), Gaps = 26/255 (10%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKN------LFEKNAVSQNDLNQQERIVYKSTLELREN 233
           ++ ++    +  L + Q++L  +KN      L  + AV +N+L  ++  +  S  + + +
Sbjct: 72  NIASQIEQTKVTLFTAQEELQRIKNNNGQSALEGEYAVKRNELLLEKARIDASVPKKQLS 131

Query: 234 IHEQKNMLRHINELYDE---ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            ++ +     + +   E   A       +      L++ Q       ++L   E+  +  
Sbjct: 132 AYDYEKYQLELEKAAIELNKAKQNLEKIITNNDVALKKQQLLIEQTGNELERSERQLDLM 191

Query: 291 TILSPIAGTIV-------YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           ++ +  AG ++         + F     AQ    +  I P     YI A +       +K
Sbjct: 192 SLKAERAGPVIYGQHPWNGEKVF-VGMTAQPGWKIANI-PSLSGLYIEAWIHEVDFHQLK 249

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G  A ++F  +       FKA +  I     ++        Y+    K  +      ++
Sbjct: 250 LGQVADLKFDAFPSQ---SFKAELVNIST-QPEERKPWGEDAYFRTEFKFANSE----SL 301

Query: 404 ELRNGFPAEVLFTAK 418
           +L  G  A++     
Sbjct: 302 KLIPGMSAQLALQGG 316


>gi|261339747|ref|ZP_05967605.1| secretion protein, HlyD family [Enterobacter cancerogenus ATCC
           35316]
 gi|288318577|gb|EFC57515.1| secretion protein, HlyD family [Enterobacter cancerogenus ATCC
           35316]
          Length = 360

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 93/280 (33%), Gaps = 28/280 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +++   +      L MK+  + +    R   E   +   A L          KN   +N 
Sbjct: 95  RIYRQRVHQAEAQLAMKIAALNNNLQQRKSAEAVIAKNDAAL----------KNARAQNL 144

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN- 269
            +Q DL + + +    +L +RE      +     +   ++A        +++   +    
Sbjct: 145 KNQADLKRVKDLTADGSLSVRERDAALASA-AQGSADIEQAKATLEMSRQDLQTVIVNRG 203

Query: 270 --QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +    +  + L + +   +   I++P  G +          Y      L  +VP    
Sbjct: 204 SLEADVDNAKAALELAQIDLQNTRIVAPRDGQLGQIAVR-LGAYVTAGTHLTTLVPPQHW 262

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQT 383
               A +   Q+ +++ G   T       D   K ++  +E I P      S    +  T
Sbjct: 263 VI--ANIKETQLANLRVGQPVTFTVDALND---KAYQGRVESISPATGVEFSAITPDNAT 317

Query: 384 QEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             + ++     ++I  L   + +  LR G   +V    + 
Sbjct: 318 GNFVKIAQRIPVRIEVLGDPEASALLRPGMSVQVTIDTRE 357



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/312 (11%), Positives = 83/312 (26%), Gaps = 24/312 (7%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                  I    +G I   +V++  ++ +G  LL  +D      +   +  +      ++
Sbjct: 57  VRGQTTFISPQVNGYITDVRVKDFDKVKKGDLLLQIDDRIYRQRVHQAEAQLAMKIAALN 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                           + A ++   Q L              +  +S   R        +
Sbjct: 117 NNLQQRKSAEAVIAKNDAALKNARAQNLKNQADLKRVKDLTADGSLSVRERD-----AAL 171

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE--KNAVSQNDLNQQERIVYKSTLE 229
            S      D+E   + L       Q  +    +L     NA +  +L Q +    +    
Sbjct: 172 ASAAQGSADIEQAKATLEMSRQDLQTVIVNRGSLEADVDNAKAALELAQIDLQNTRIVAP 231

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE- 288
               + +    L                    +  ++++ Q         +T        
Sbjct: 232 RDGQLGQIAVRLGAYVTAGTHLTT-LVPPQHWVIANIKETQLANLRVGQPVTFTVDALND 290

Query: 289 -----QKTILSPIAGTIVYNQS--FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                +   +SP  G      +   ++ N+ + +Q +           I     P+    
Sbjct: 291 KAYQGRVESISPATGVEFSAITPDNATGNFVKIAQRI--------PVRIEVLGDPEASAL 342

Query: 342 VKKGYTATVRFP 353
           ++ G +  V   
Sbjct: 343 LRPGMSVQVTID 354


>gi|148656230|ref|YP_001276435.1| secretion protein HlyD family protein [Roseiflexus sp. RS-1]
 gi|148568340|gb|ABQ90485.1| secretion protein HlyD family protein [Roseiflexus sp. RS-1]
          Length = 541

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/275 (12%), Positives = 81/275 (29%), Gaps = 7/275 (2%)

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                         +++ ++L       ++  +     E + S+ +A L+  +   T  +
Sbjct: 269 AQFVQAEAALRQAETALEQALVQAEEARQAEAVGVRQAELQVSIAQATLAKAEAGPTRQE 328

Query: 204 -NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
               E    +   L      +  +  +LR  +   +           +A           
Sbjct: 329 IAAAETALANAQRLLDVVEAMRANPQQLRAAVDAARTQQAIAEAQLAQARARLDLARNGA 388

Query: 263 SRDLEQNQRTFADEMS-KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
             +  Q       +    L  +E   ++  + +P  G ++               PLM I
Sbjct: 389 RPEQIQAAEAQLAQARASLHQVEVMIDKARLRAPRTGIVLSRPIH-EGEQVTPGTPLMTI 447

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                   +   ++   I  V+ G  A V    +       F   +  I         N+
Sbjct: 448 GALD-PVRLTVYISEADIGRVRLGQAAEVTVDSFPGR---VFHGTVTFIAQRAEFTPRNV 503

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           QT++     +    +   + +  L+ G PA+V+  
Sbjct: 504 QTRDERATTVFAVRIELPNADYALKPGMPADVVLV 538



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 69/205 (33%), Gaps = 15/205 (7%)

Query: 13  HPASLKRMTLLSIIGIIGLITW----SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           HP +   + L+ +  +IG   W    S       +++ +G I  E+  V + +  +G ++
Sbjct: 2   HPRARIIILLVLVAVLIGGGYWLLQESAQAR-NGTLTGTGTIEAEE--VLVTAEIAGRVQ 58

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA--------LDFL 120
              V+ GS++  G  L   +       +D  K ++     ++   ++          +  
Sbjct: 59  HLFVDEGSEVRIGEDLAQIDTALLEAQLDQAKAAVAAAEANLAQIRAGTRSEEIAIAEAQ 118

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             + +   +  E   E  L+ L        ++             ++  R      +   
Sbjct: 119 VKQAEAAARGAEQAYEHALEILNNPQELELQLVQARAQRDAALRTLEKLRAGVRQEDIDA 178

Query: 181 LENKSSLLRALLSSHQKDLTMMKNL 205
                 L +  L S +  L+  K L
Sbjct: 179 ARASMHLAQEGLQSARDRLSAAKTL 203


>gi|325300110|ref|YP_004260027.1| secretion protein HlyD family protein [Bacteroides salanitronis DSM
           18170]
 gi|324319663|gb|ADY37554.1| secretion protein HlyD family protein [Bacteroides salanitronis DSM
           18170]
          Length = 355

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/359 (12%), Positives = 103/359 (28%), Gaps = 85/359 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+ +      + +G  LL  ++ E         + +K     +   + A D L++ 
Sbjct: 66  SGYIKEVRFREHQYVHKGDTLLVLDNSEY-------LIRVKEAEAALLDARGAQDVLHS- 117

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                                          + + + N    + 
Sbjct: 118 ----------------------------------------------GIETSHANIAVQDA 131

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +  +A L   ++D    + L ++ ++ Q    Q +     +    +  + +++     
Sbjct: 132 NIAEAKARLWQLEQDYHRFQRLLKEESIPQQQFEQAKASYEAAQARYQALLEQKRAAQSQ 191

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E                       + T     + L +         +++P  G +   
Sbjct: 192 YTETSKRT---------------VSAEATILRMEADLDLARLNLSYTILIAPYDGYM-GR 235

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     Y Q  Q +  +V      ++ A     QI H+  G    ++           F
Sbjct: 236 RTLEPGQYVQAGQTISYLV-RGDDKWVTANYKETQIMHIYIGQPVRIKVDALPGR---VF 291

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           +  +  I           P  +   N ++ Q+   V + + D A  D+   LR G   E
Sbjct: 292 RGEVTAISEATGSKYSLVPTDNSAGNFVKVQQRIPVRIDLKD-ASDDDMRHLRAGMMVE 349


>gi|317477125|ref|ZP_07936366.1| HlyD family secretion protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316906668|gb|EFV28381.1| HlyD family secretion protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 363

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 60/415 (14%), Positives = 126/415 (30%), Gaps = 92/415 (22%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF------SGIIK 68
             L+R  ++  +  + ++ W I+  +     S       ++    +         SG IK
Sbjct: 21  RKLRRWQIVVSLLGVAIVVWGII-EVACLFLSYNRTETSNDAQIEQYISPINLRASGYIK 79

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K       +I +G  LL  +D          K+ +      +   ++    +       +
Sbjct: 80  KIYFTEHQEIHKGDTLLVLDD-------REYKIRVMEAEAALKDAQAGATVIGATLQTTQ 132

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                                                +   S +
Sbjct: 133 TTASV-----------------------------------------------YDASISEI 145

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L+  +KD    +NL ++NA +   L Q E     +  +L     +QK  L  +N   
Sbjct: 146 EIRLAKLEKDRQRYQNLVQRNAATPIQLEQIETEYEATRKKLEATKRQQKAALSGVN--- 202

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                       E+S   E  +       + L +         +++P  G  +  ++   
Sbjct: 203 ------------EVSHRRESTEAAIQRATAALEMARLNLSYTVVVAPCDGK-LGRRALEE 249

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
             +    Q +  I+P ++   + A     Q++++  G   +V     ++   K+F   I 
Sbjct: 250 GQFITAGQTITYILPDTQKWIV-ANYKETQVENLHIGQKVSVTVDAISN---KEFTGTIT 305

Query: 369 KID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            I           P  +   N ++ Q+   V +  T+L+  DN  +L  G    V
Sbjct: 306 AISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTNLSKEDNE-KLAAGMMVIV 359


>gi|254412157|ref|ZP_05025932.1| efflux transporter, RND family, MFP subunit, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196181123|gb|EDX76112.1| efflux transporter, RND family, MFP subunit, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 499

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/400 (11%), Positives = 108/400 (27%), Gaps = 92/400 (23%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           ++G +   +    +       I++  VE G  +  G  L   +D      +   + S+  
Sbjct: 126 ATGSVAAFEMSPVLSQATGLQIQQVLVEEGQVVKAGQLLARLDDSVLQAQLRQAQASVAQ 185

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
               +   ++     +   ++          +      +     ++        +     
Sbjct: 186 AEARLAELRAG----SRSEEIARAKEVVSSAESAVAAAESDLELARTRVDRNKKLQAEGA 241

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           +   R+  +Y       ++    +A L    + L  +                       
Sbjct: 242 IARDRLDEVYNQERSYRSQLEQAQARLREANQQLAQL----------------------- 278

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
                      Q    R +    +    +    ++ +   L   +               
Sbjct: 279 -----------QAGPRREVITQAEAQLAQAQAQVQSMMAQLNNTR--------------- 312

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 I++P++G I    +    +    SQ L KI+  +    +   V   Q+  +K G
Sbjct: 313 ------IVAPVSGKIAERNAR-VGDVTSGSQTLFKII-ENGRLELIVNVPETQLPQIKPG 364

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            + T+           +    + +IDPII +     Q      V + +   A       L
Sbjct: 365 QSVTITSDA---DSSLQLSGKVREIDPIIDEASRQAQ------VKINLPASA------AL 409

Query: 406 RNGF----------------PAEVLFTAKNTTLAQEIIHP 429
           + G                 PA+ +    + +    I+ P
Sbjct: 410 KPGMFLRASITTSAAQGLTVPAKAILPQSDGSAIAYILQP 449


>gi|157145695|ref|YP_001453014.1| hypothetical protein CKO_01444 [Citrobacter koseri ATCC BAA-895]
 gi|157082900|gb|ABV12578.1| hypothetical protein CKO_01444 [Citrobacter koseri ATCC BAA-895]
          Length = 360

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 88/280 (31%), Gaps = 28/280 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +++   +      L MK+  + +    R   E   +   A+L + +           ++ 
Sbjct: 95  RIYRQRVHQGEAQLAMKIAALNNNLQQRKSAEAVIARNEAVLKNAK----------AQSL 144

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN- 269
            +Q DL + + +    +L +RE      +         D+A        +++   +    
Sbjct: 145 KTQADLKRVKDLTADGSLSIRERDAALASA-AQGRADIDQAKATLEMSRQDLQTVIVNRG 203

Query: 270 --QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +    +  + L + +   +   I++P  G +          Y      L  +VP    
Sbjct: 204 ALEADVENARAALELAQIDLQNTRIVAPRDGQLGQIAVR-LGAYVTAGTHLTTLVPPQHW 262

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQT 383
               A +   Q+  ++ G           D      +  +E I P      S    +  T
Sbjct: 263 VI--ANIKETQLAELRVGQPVRFTVDALNDRAY---EGRVESISPATGVEFSAITPDNAT 317

Query: 384 QEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             + ++     +++  L   +    LR G   +V    + 
Sbjct: 318 GNFVKIAQRIPVRVEVLGKPEEIARLRPGMSVQVHIDTRE 357



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 91/308 (29%), Gaps = 16/308 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                  I    +G I +  V++  Q+ +G  L+  +D      +   +  +      ++
Sbjct: 57  VRGQTTFISPQVNGYITQVNVQDFVQVKKGELLMQIDDRIYRQRVHQGEAQLAMKIAALN 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR--SLKMKLT 169
                           E   ++ + Q L              +  +S   R  +L     
Sbjct: 117 NNLQQRKSAEAVIARNEAVLKNAKAQSLKTQADLKRVKDLTADGSLSIRERDAALASAAQ 176

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK--ST 227
               I   +  LE     L+ ++ +       ++N      ++Q DL     +  +    
Sbjct: 177 GRADIDQAKATLEMSRQDLQTVIVNRGALEADVENARAALELAQIDLQNTRIVAPRDGQL 236

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            ++   +        H+  L    +   AN  +    +L   Q       +      +  
Sbjct: 237 GQIAVRLGAYVTAGTHLTTLVPPQHWVIANIKETQLAELRVGQPVRFTVDALNDRAYEG- 295

Query: 288 EQKTILSPIAGTIVYNQS--FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
            +   +SP  G      +   ++ N+ + +Q +           +     P++I  ++ G
Sbjct: 296 -RVESISPATGVEFSAITPDNATGNFVKIAQRI--------PVRVEVLGKPEEIARLRPG 346

Query: 346 YTATVRFP 353
            +  V   
Sbjct: 347 MSVQVHID 354


>gi|167570124|ref|ZP_02362998.1| multidrug resistance protein [Burkholderia oklahomensis C6786]
          Length = 406

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 91/273 (33%), Gaps = 32/273 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVKAAQASLDTAKQQLASNRALTANTTIADHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+     +  + T+ +P+ G +   +S           PLM +VP     ++ A 
Sbjct: 199 LAAAAKVRDAYLSNARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPL-SAVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q++H++ G    +    Y      K+   +              P  +   N ++ 
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSI--KYHGKVIGFSAGTGAAFSLLPAQNATGNWIKV 314

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   V ++I      D+ + +      +V   
Sbjct: 315 VQRLPVRVEIDPKDLKDHPLRIGLSMQVDVDIK 347



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 46/134 (34%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L   L   +  +   +  ++   +V  +     T
Sbjct: 116 GLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASLDT 175

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 176 AKQQLASNRALTAN 189


>gi|332880142|ref|ZP_08447824.1| efflux transporter, RND family, MFP subunit [Capnocytophaga sp.
           oral taxon 329 str. F0087]
 gi|332681901|gb|EGJ54816.1| efflux transporter, RND family, MFP subunit [Capnocytophaga sp.
           oral taxon 329 str. F0087]
          Length = 388

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 75/223 (33%), Gaps = 17/223 (7%)

Query: 204 NLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLK 260
           +L +K   +++ D       +  +   L     E      +    +  +E  L   N  +
Sbjct: 78  SLVKKGQVIAELDKTTLNSELNSARANLASAKSELDYQTANYKRYKTLNEKGLVSRNDYE 137

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--L 318
               D  +   T+      +   E      TI SPI G ++  +       A   +   L
Sbjct: 138 VAYLDYRKALETYNTTKESVKKAETNIGYATITSPIDGIVLSKEVEEGQTVAASFETPTL 197

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             I        + A +    I  V++G   T     Y +     F   + ++    ++ D
Sbjct: 198 FTIAKDLTDMRVIADIDEADIGSVREGQNVTFTVDAYPNDT---FHGQVTQVRQEATETD 254

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           N +     YEV++        +N+++L+ G  A V  +    T
Sbjct: 255 NVIT----YEVVISAP-----NNDLKLKPGLTANVSVSTLERT 288



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 4/171 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII    V+  S + +G  +   +       ++  
Sbjct: 43  IRNSVTATGTIEPVTEV-EVGTQVSGIISNIYVDYNSLVKKGQVIAELDKTTLNSELNSA 101

Query: 100 KVSIKNLRCHIDTEKS---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + ++ + +  +D + +       LN K  V    +E         L  Y++T   V    
Sbjct: 102 RANLASAKSELDYQTANYKRYKTLNEKGLVSRNDYEVAYLDYRKALETYNTTKESVKKAE 161

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            +  Y ++   +  +             +S     L +  KDLT M+ + +
Sbjct: 162 TNIGYATITSPIDGIVLSKEVEEGQTVAASFETPTLFTIAKDLTDMRVIAD 212


>gi|255524373|ref|ZP_05391330.1| secretion protein HlyD family protein [Clostridium carboxidivorans
           P7]
 gi|296187498|ref|ZP_06855893.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
 gi|255511930|gb|EET88213.1| secretion protein HlyD family protein [Clostridium carboxidivorans
           P7]
 gi|296048020|gb|EFG87459.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
          Length = 334

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 119/367 (32%), Gaps = 90/367 (24%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG+I  + N   I S  +  + + +V+ G+++  G P++  ++ +    ++         
Sbjct: 50  SGKIQAD-NYANISSQINAKVTEIKVDVGTKVNAGDPIIYLDNKDLQSQVN-------QA 101

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              + T ++ LD +                                              
Sbjct: 102 EAAVSTNQANLDKIKAG------------------------------------------- 118

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             TR  SI   R  ++   +         QK+    K L +    ++ +L Q ++    +
Sbjct: 119 --TRPESIASQRALVDGDKTA----YDIAQKNYARQKQLLQGGNTAEVNLEQAQQAFSAA 172

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             +   +     +M     +                  D+  ++       +   I + +
Sbjct: 173 KAKYDADSQALASMENGPTQ-----------------SDINASRALVKQAEAAAEISKTS 215

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                I +PI+GT+           +  +QPL+ IV      +I +      +  +K G 
Sbjct: 216 LTHTVITAPISGTVTVKNIN-VGEMSGTNQPLVTIV-SGDGLHIDSYAPENLLAKLKVGI 273

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              V+   ++D   K F+  I  I+  I  ++ +            +  +A  D++  L+
Sbjct: 274 QVNVKVSGFSD---KVFQGEISTINSQIDSRNKDA-----------LVKIALKDHSDILK 319

Query: 407 NGFPAEV 413
            G  AE+
Sbjct: 320 PGMFAEI 326


>gi|118590671|ref|ZP_01548072.1| hypothetical protein SIAM614_05873 [Stappia aggregata IAM 12614]
 gi|118436647|gb|EAV43287.1| hypothetical protein SIAM614_05873 [Stappia aggregata IAM 12614]
          Length = 337

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 18/206 (8%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + +++    + + R  + E +   + + +   E  L+         +  ++ Q    
Sbjct: 76  QVKKGDQLAELDSGDARATLAELE-ARQELAQSDKERALQLLERRVVSQQVYDKAQNELI 134

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +     ++      I++P+ G ++     S    A+  + L  I        + A+V
Sbjct: 135 RINATTAAQKERLRDYVIVAPMDGMVLR-ADGSVGEVAEPGEILFWIG-QPSPLQLVAEV 192

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             + I  V KG+ A +R   + D   K+  A +  I P       N      Y V L + 
Sbjct: 193 NEEDIPKVAKGHKALIRADAFPD---KELTAEVASITPKGDPVLKN------YRVYLDLP 243

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNT 420
           +      +  LR G  AE+       
Sbjct: 244 E------DTPLRIGMTAEINIVTSEK 263



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 43/121 (35%), Gaps = 13/121 (10%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE----NGSQILQGTPLLTFEDIETTDLI 96
              V ++  +             + II++  V      G Q+ +G  L   +  +     
Sbjct: 41  AEVVYATAVVEPVRWAKV-----TSIIRERIVSLCGCEGEQVKKGDQLAELDSGDARA-- 93

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            L ++  +      D E++    L  +  V ++ ++  + +L+       +   ++ +Y 
Sbjct: 94  TLAELEARQELAQSDKERAL--QLLERRVVSQQVYDKAQNELIRINATTAAQKERLRDYV 151

Query: 157 I 157
           I
Sbjct: 152 I 152


>gi|83720021|ref|YP_443077.1| multidrug resistance protein [Burkholderia thailandensis E264]
 gi|167620243|ref|ZP_02388874.1| multidrug resistance protein [Burkholderia thailandensis Bt4]
 gi|257139307|ref|ZP_05587569.1| multidrug resistance protein [Burkholderia thailandensis E264]
 gi|83653846|gb|ABC37909.1| multidrug resistance protein [Burkholderia thailandensis E264]
          Length = 410

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 93/273 (34%), Gaps = 32/273 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D AN + A+     +     N    
Sbjct: 157 EE------------------ISHARDAVKAAQASLDAANQQLASNRALTANTTIANHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+AG +   +S           PLM +VP +   +I A 
Sbjct: 199 LAAAAKVRDAYLNNARNTLPAPVAGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWIDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q++H++ G    +    Y      K+   +              P  +   N ++ 
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSV--KYHGKVVGFSAGTGAAFSLLPAQNATGNWIKV 314

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   V +++      D+ + +      +V   
Sbjct: 315 VQRLPVRIELDPKELKDHPLRIGLSMQVDVDIK 347



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 57/181 (31%), Gaps = 10/181 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                  +        + D+ +   + R    +   G             + +   SL  
Sbjct: 116 GLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASLDA 175

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQER 221
              ++ S      +  + N  ++L A        L   +N         V++  +   +R
Sbjct: 176 ANQQLASNRALTANTTIANHPNVLAAAAKVRDAYLNNARNTLPAPVAGYVAKRSVQVGQR 235

Query: 222 I 222
           +
Sbjct: 236 V 236


>gi|20455421|sp|Q9L9D4|YBHG_THIFE RecName: Full=UPF0194 membrane protein in asrC 5'region; AltName:
           Full=ORF1; Flags: Precursor
 gi|7769075|gb|AAF69246.1|AF173880_9 unknown [Acidithiobacillus ferrooxidans]
          Length = 338

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 80/255 (31%), Gaps = 45/255 (17%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K +  +A LS+ +      + L  +  V +  L+     +  +   L          ++ 
Sbjct: 119 KPAAAQATLSNAEITWQRQQALAARQYVPKQSLDNAAAALKTARANLDRAQQALTLAIKG 178

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             +                  D+   ++    + + L++  +      + +P  G +   
Sbjct: 179 PRK-----------------EDIAAARQQLQADKAGLSLARRELTDTRLYAPEDGVVQD- 220

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +     +      P+  +       ++RA +  K +  V+ G  AT+    +     K F
Sbjct: 221 RILEPGDMVSPQTPVFTLA-LDNPVWVRAYLPEKALGQVRLGMKATISSDSFP---GKSF 276

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
              +  I P       + Q   L+T+  Y V +        +    LR G P  V     
Sbjct: 277 PGWVGFISPTAEFTPKTVQTTELRTELVYRVRV-----YACNPQHRLRLGMPVTVHI--- 328

Query: 419 NTTLAQEIIHPITDN 433
                     P+TDN
Sbjct: 329 ----------PLTDN 333



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 80/222 (36%), Gaps = 26/222 (11%)

Query: 18  KRMTLLSIIGIIGLITWSIL----LPIEISVSSSGEILNEDNVVEIKSP--FSGIIKKFQ 71
           + + L+ ++ + G + +  L     P E +V+  G I    ++ ++++    +G +   +
Sbjct: 8   RALALVVVLIVAGAVAYYFLSRHHAP-EKTVTIYGNI----DIRQVQAAFDDNGRLLDLR 62

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKV----SIKNLRC------HIDTEKSALDFLN 121
           V+ G ++ +G  L   + +   D +D          +  R          + +       
Sbjct: 63  VQEGDRVKKGQLLADLDPVRFQDAVDKDAAVWPRKSRCWRACWRVPVRKKSPRPGPKPAA 122

Query: 122 NKYDVLEKAFESREEQLLDFLG----KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            +  +       + +Q L        +     +       +++ R+ +     ++     
Sbjct: 123 AQATLSNAEITWQRQQALAARQYVPKQSLDNAAAALKTARANLDRAQQALTLAIKGPRKE 182

Query: 178 RLDLE-NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +     +    +A LS  +++LT  +    ++ V Q+ + +
Sbjct: 183 DIAAARQQLQADKAGLSLARRELTDTRLYAPEDGVVQDRILE 224


>gi|206562649|ref|YP_002233412.1| efflux system transport protein [Burkholderia cenocepacia J2315]
 gi|198038689|emb|CAR54650.1| efflux system transport protein [Burkholderia cenocepacia J2315]
          Length = 364

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/371 (12%), Positives = 98/371 (26%), Gaps = 75/371 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    +G + K  V +  ++  G  L           + L             
Sbjct: 62  VGGDVTVLAPKVNGFVDKILVTDNQRVKAGDVL-----------VQLDARDYDAKLAQAS 110

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E                                           + S   ++     + 
Sbjct: 111 AE-------------------------------------------VDSARSAVTELEAKQ 127

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +  Y          +   A L+    D    + L + +AVS   + + +    K+   + 
Sbjct: 128 QLQYAVIGQHAADKNASSAELTRAASDRVRYRELVKSDAVSNQIVERADADYSKAGAAVE 187

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   +      ++   +     E  T
Sbjct: 188 RSDAALLASKRQLDVL---------------GAQLADARARVNTALAAQRVAALNVEYTT 232

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +  N++      A    PL+ +VP S   +I A     Q++ ++ G    V 
Sbjct: 233 IRSPVDGYV-GNRTGRVGMLANVGVPLLTVVPASD-LWIDANFKEDQLRKMRAGDRVDVA 290

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIE--LRN 407
               +     +  ++        S       T  + ++   + +         IE  LR 
Sbjct: 291 LDASSTRLHGRVDSLAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGIEQVLRP 350

Query: 408 GFPAEVLFTAK 418
           G  A V     
Sbjct: 351 GLSAVVTVHTD 361


>gi|223940249|ref|ZP_03632108.1| efflux transporter, RND family, MFP subunit [bacterium Ellin514]
 gi|223891076|gb|EEF57578.1| efflux transporter, RND family, MFP subunit [bacterium Ellin514]
          Length = 428

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/357 (12%), Positives = 102/357 (28%), Gaps = 71/357 (19%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +    +   + QG  LL  +  +    +  K  ++K+    + T KS         
Sbjct: 77  GQVIELHATDNRLVNQGDLLLRIDPRDYEAKVKEKNAALKSSETGLTTAKSR-------- 128

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                  L++  + + +   NR  LE +
Sbjct: 129 ---------------------------------------LEVARSALTAAEANRAQLEAQ 149

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           ++  +A  +  + DL   K L  +  +S  + +        +                 +
Sbjct: 150 ANAAKAEATKAESDLERNKELLARKTISPQEFDTFRATAKTTAANYEAARQRVAAGESQV 209

Query: 245 NELYDE-ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           N+   E    + A         L Q           L   E       I +P+   +   
Sbjct: 210 NQSRAELTAAQIAIETANADIKLAQA---------SLQTAELNLSYTHIQAPLTAYVTR- 259

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++    +Y Q  Q +M +VP +   Y+ A     Q+ +++ G    +    Y     +  
Sbjct: 260 RAVDVGSYLQIGQNIMALVPTN--IYVVANFKENQLHYMRPGQAVEIDVSAYPHQPYR-- 315

Query: 364 KAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIELR----NGFPAE 412
              ++ I      +            + +V+ ++      D  +  +     G   E
Sbjct: 316 -GHVDSIQQGSGARFSLLPPENAVGNFVKVVQRVPVKILFDEPLNPKLVFGPGMSVE 371


>gi|260175289|ref|ZP_05761701.1| putative multidrug resistance protein [Bacteroides sp. D2]
 gi|315923522|ref|ZP_07919762.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313697397|gb|EFS34232.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 356

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 97/285 (34%), Gaps = 31/285 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL    + +    K     +   + S  +  + + + + N    +   +  +A L   ++
Sbjct: 87  LLVLDNREYQIKVKEAEAALLDAHGSQDVLHSGIETSHTNIAVQDANIAEAKAKLWQLEQ 146

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D    + L ++ +V +    Q +     +    +  + +++  L    E   +     A 
Sbjct: 147 DYHRFERLLKEESVPEQQYEQAKAAYEIAKARYQALVAQKQAALSQYAETSKKTTGTEAA 206

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L++                + L + +       + +P  G +   ++     Y Q  Q 
Sbjct: 207 ILRK---------------EADLDLAKLNLSYTVLTAPYDGYM-GRRTLEPGQYVQTGQT 250

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID------ 371
           +  +V  +K  +I A     QI ++  G    ++      +  K F   +  I       
Sbjct: 251 ISYLV-RNKDKWITANYKETQIANIYIGQQVRIKVDA---VPGKIFHGEVTAISEATGSK 306

Query: 372 ----PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
               P  +   N ++ Q+   V + + D++  +   +LR G   E
Sbjct: 307 YSLVPTDNSAGNFVKVQQRIPVRIDLEDVS-PEEMAQLRAGMMVE 350



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 52/154 (33%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+ + +    + QG  LL  ++ E    +   + ++ +     D   S ++  +  
Sbjct: 67  SGYIKEVRFKEHQYVHQGDTLLVLDNREYQIKVKEAEAALLDAHGSQDVLHSGIETSHTN 126

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             V +      + +L      YH     +    +             +       L  + 
Sbjct: 127 IAVQDANIAEAKAKLWQLEQDYHRFERLLKEESVPEQQYEQAKAAYEIAKARYQALVAQK 186

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +++L +   +S +   T    L ++  +    LN
Sbjct: 187 QAALSQYAETSKKTTGTEAAILRKEADLDLAKLN 220


>gi|218667019|ref|YP_002425347.1| drug resistance transporter, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|218519232|gb|ACK79818.1| drug resistance transporter, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 387

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/433 (12%), Positives = 117/433 (27%), Gaps = 103/433 (23%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL-----NEDNVVEIKSPFSGIIKK 69
              + + L+++I ++  + W+    +         I         N+  + S  +G I +
Sbjct: 15  KRTRLLVLVTLIFVLAGLIWAAWWFL----RGQYWIETNDAYVSGNITPVDSQTAGTISR 70

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             VEN   +  G  +                 +++  R  I  +++              
Sbjct: 71  VLVENTEFVRAGQVM----------------ATLQAHRSQIALQQAGAH----------- 103

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                                             L   + ++R  +     L+   S   
Sbjct: 104 ----------------------------------LAATVRQVRRDFAKVTALQQTVSAKN 129

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L     D    K      AVS   L   +  +  +T ++       K     I     
Sbjct: 130 AELRKLNADFIRYKQSLPSGAVSAIRLEDTQNEIAAATAQVAAAQAALKGTQAIIAGTTL 189

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           + N        +  +                   +   +++ + +P++G +     +   
Sbjct: 190 QTNPLVRQAAAQFEQ------------------ADIQWQRRVVRAPVSGYVAERTVY-PG 230

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY--ADIREKKFKAII 367
                 Q L  +VP + L  + A V    ++HV  G    +   +Y        +   ++
Sbjct: 231 LMVHPDQRLFSVVPLNDLWVV-ANVKETAMRHVHPGQCVQLTSDYYGGDVRYHGEVLGLL 289

Query: 368 EKIDPIISQQDNNLQTQEYY----EVILKITDLAFSDNNIELRNG--FPAEVL-FTAKNT 420
                          T  Y      V ++I   A       LR G    A +    ++  
Sbjct: 290 PGAGSAFGILPPENATGNYIHIVERVPIRIALSAAELAQYPLRPGLSMVAGIHWTRSQKH 349

Query: 421 TLAQEIIHPITDN 433
           ++      P+T  
Sbjct: 350 SVL----KPLTTT 358


>gi|167562934|ref|ZP_02355850.1| multidrug resistance protein [Burkholderia oklahomensis EO147]
          Length = 406

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 91/273 (33%), Gaps = 32/273 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVKAAQASLDTAEQQLASNRALTANTTIADHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+     +  + T+ +P+ G +   +S           PLM +VP     ++ A 
Sbjct: 199 LAAAAKVRDAYLSNARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPL-SAVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q++H++ G    +    Y      K+   +              P  +   N ++ 
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSI--KYHGKVIGFSAGTGAAFSLLPAQNATGNWIKV 314

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   V ++I      D+ + +      +V   
Sbjct: 315 VQRLPVRVEIDPKDLKDHPLRIGLSMQVDVDIK 347



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 47/142 (33%), Gaps = 9/142 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++       +V+++    ++ 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKAGDPLVVLDPADS-------QVALQQAEANLA 108

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                +  L    D        R+  L           +      +S     +      +
Sbjct: 109 QTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ--EEISHARDAV 166

Query: 172 RSIYLNRLDLENKSSLLRALLS 193
           ++   +    E + +  RAL +
Sbjct: 167 KAAQASLDTAEQQLASNRALTA 188


>gi|153806131|ref|ZP_01958799.1| hypothetical protein BACCAC_00386 [Bacteroides caccae ATCC 43185]
 gi|149130808|gb|EDM22014.1| hypothetical protein BACCAC_00386 [Bacteroides caccae ATCC 43185]
          Length = 356

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 104/295 (35%), Gaps = 31/295 (10%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E  +  + + LL    + +    K     +   + S ++  + + + + N    +   + 
Sbjct: 77  EHQYVRQGDTLLVLDNREYQIKVKEAEAALLDAHGSQEVLHSGIETAHTNIAVQDANIAE 136

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +  L   ++D    + L ++ +V +    Q +     +    +  + +++++L    E 
Sbjct: 137 AKTKLWQLEQDYHRFERLLKEESVPEQQFEQIKAAYEAAKARNQALVAQKQSVLSQYTET 196

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +                   + T   + + L + +       + +P  G +   ++  
Sbjct: 197 SKKTTS---------------AEATILRKEADLDLAKLNLSYTVLTAPYDGYM-GRRTLE 240

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Y Q  Q +  +V  +K  +I A     QI ++  G    ++      +  K F   +
Sbjct: 241 PGQYVQTGQTISYLV-RNKDKWITANYKETQIANIYIGQQVRIKVDA---VPGKIFHGEV 296

Query: 368 EKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             I           P  +   N ++ Q+   V +++ D++ S+   +LR G   E
Sbjct: 297 TAISEATGSKYSLVPTDNSAGNFVKVQQRIPVRIELEDVS-SEEMAQLRAGMMVE 350



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 57/167 (34%), Gaps = 12/167 (7%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+   +    + QG  LL  ++ E    +   + ++ +     +   S ++  +  
Sbjct: 67  SGYIKEVCFKEHQYVRQGDTLLVLDNREYQIKVKEAEAALLDAHGSQEVLHSGIETAHTN 126

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             V +      + +L      YH     +    +              +     +   E 
Sbjct: 127 IAVQDANIAEAKTKLWQLEQDYHRFERLLKEESVPE------------QQFEQIKAAYEA 174

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             +  +AL++  Q  L+      +K   ++  + ++E  +  + L L
Sbjct: 175 AKARNQALVAQKQSVLSQYTETSKKTTSAEATILRKEADLDLAKLNL 221


>gi|71065141|ref|YP_263868.1| macrolide secretion protein MacA [Psychrobacter arcticus 273-4]
 gi|71038126|gb|AAZ18434.1| macrolide secretion protein MacA, HlyD family [Psychrobacter
           arcticus 273-4]
          Length = 455

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/384 (13%), Positives = 121/384 (31%), Gaps = 79/384 (20%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  IE +V +SG++    N V++ +  SG + +  VE G ++ +G  +   + +   +
Sbjct: 44  AEIGDIENNVMASGKVKA-LNTVDVGAQVSGEVTRLFVEVGDEVQKGDLIAQIDQVTQKN 102

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +  ++ S                                                    
Sbjct: 103 NLSNEQAS--------------------------------------------------LE 112

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              + +  +    L+R   +   + DL ++ + LR      Q D + ++ L   +A+SQ 
Sbjct: 113 QSEAGLQSARAESLSRQAGLKSAQADLASRQAELRQ----AQADFSRLQGLLAIDAISQQ 168

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           D + Q   V  +   +             I                  + ++   Q    
Sbjct: 169 DYDTQGTKVQTAQAAVANARASIDTAKAAIATT---------------AANINSQQAALR 213

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRA 332
              + ++  ++     TI +P++GT+V   +         +Q    IV  +      I A
Sbjct: 214 KSQTNVSTAQEDLSYTTIRAPMSGTVVSV-TTEQGTTVNANQTAPTIVTLADLSTVRINA 272

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +++   + +VK G           D +       IE   P      ++     YY   ++
Sbjct: 273 QISEADVINVKAGLPVYFNIIGNPDQKYDSILKAIEP-APEKISDTSSTDAAIYYVGYIE 331

Query: 393 ITDLAFSDNNIELRNGFPAEVLFT 416
           + ++        +     A+V   
Sbjct: 332 VPNIER---RFRI--DMTAQVYIV 350


>gi|160877073|ref|YP_001556389.1| secretion protein HlyD family protein [Shewanella baltica OS195]
 gi|160862595|gb|ABX51129.1| secretion protein HlyD family protein [Shewanella baltica OS195]
 gi|315269277|gb|ADT96130.1| secretion protein HlyD family protein [Shewanella baltica OS678]
          Length = 352

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 60/328 (18%), Positives = 112/328 (34%), Gaps = 31/328 (9%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC-SKVFNYGISSVYRSLKM 166
            +++ + S +      Y VL    +++  Q  + L +      S   +   +S+  S   
Sbjct: 37  AYVEADISHISVKVPGYVVLSDVTDNQHVQKGELLAQLEDNQFSAKVSQAEASLASSKAD 96

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLS---SHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
             T    + L R  +   S+ + A  S     Q+ L+  K L   N  SQ+D++Q +   
Sbjct: 97  LQTLAAKVELQRALITQASAGVVAAESDKIRAQQQLSRSKKLKVSNYSSQDDVDQLQAGF 156

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +   L E         R +                  +  L+Q         + L + 
Sbjct: 157 DSAAARLDEAKAVLVAKQRELAV---------------FNAQLDQAGSVVEQADATLELA 201

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +       + +P +G I   +      Y Q  Q L  +VP     +I A     QIQH++
Sbjct: 202 KIQLNDTRVTAPFSGVI-GKRGAMVGQYVQPGQALYSLVP-DGAVWITANFKETQIQHMQ 259

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DL 396
            G +  V    + D   K F  +I+ + P    +         T  + +++ +I     L
Sbjct: 260 PGQSVQVSLDAFPD---KTFIGVIDSLSPASGAKFSLLPAENATGNFTKIVQRIPVRIRL 316

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             S+    +  G  A V     + T   
Sbjct: 317 DLSEAEAHMLPGLSAVVKVDTASGTAIS 344


>gi|34496164|ref|NP_900379.1| multidrug resistance transmembrane protein [Chromobacterium
           violaceum ATCC 12472]
 gi|34102018|gb|AAQ58385.1| probable multidrug resistance transmembrane protein
           [Chromobacterium violaceum ATCC 12472]
          Length = 380

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/359 (11%), Positives = 100/359 (27%), Gaps = 61/359 (16%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K+ +V +   +  G  L+   D +    +   +  +      +    +  + L+   
Sbjct: 73  GTVKEVKVVDTQPVKAGEVLVVLNDSDARLALAQAEADLARAERRVKGYFANDEGLS--- 129

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                        + ++   ++     +
Sbjct: 130 --------------------------------------------AQAQARSADQARSAAQ 145

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               RA L+  + DL   + L +  +VS  +L+  +     +   L+      +    + 
Sbjct: 146 LGSARADLARARLDLQRRQALAKSGSVSGEELSNAQNAYSTAQASLKAAEAASRQSEANY 205

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                      AN     +  ++ N        +K        E+  I + + G +V  +
Sbjct: 206 RAAVGSLK---ANQTLTANTTVDDN-PEVTLARAKRDQARLDLERTVIRAQVDG-VVAKR 260

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-----R 359
                   Q   PLM +VP     ++ A     Q+  V+ G    +    Y +      +
Sbjct: 261 QAQVGQRVQSGTPLMSVVPLQNA-HVDANFKEVQLNKVRVGQPVELTADLYGNKVVYHGK 319

Query: 360 EKKFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                        +I  Q+      +  +   V + +       + +++     A +  
Sbjct: 320 VAGLSGGSGSAFAMIPAQNATGNWIKVVQRLPVRIALDQAELKAHPLQVGLSMEATIDV 378


>gi|157827090|ref|YP_001496154.1| multidrug resistance protein A [Rickettsia bellii OSU 85-389]
 gi|157802394|gb|ABV79117.1| Multidrug resistance protein A [Rickettsia bellii OSU 85-389]
          Length = 284

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 93/275 (33%), Gaps = 18/275 (6%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +   ++++  S+      +  I       +N+       L        ++   F    
Sbjct: 19  RDYKAKLAALEASIGASEKNIEIIDQKISIGQNQLEQSGEKLKLAATSFNIVSTDF---- 74

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                + +  +  + S   L ++ +  +       +   + ++   N L+ +  +    Q
Sbjct: 75  ---TRVQELNKAKFASIKALDDSKNAYQKAKTDYKQAQLDIDISKQN-LQLLGLEKAAEQ 130

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +  +   I+ ++ +   +++ ++G +  N S    NY    + L  IV      YI
Sbjct: 131 EKLKELEANKKIILRSLQNTKLIAVVSG-VFGNSSLEVGNYITPGRALFSIV-QDNSMYI 188

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEY 386
           +A     QI+  + G    ++F     I +K F   I  I P    +      +  T  +
Sbjct: 189 QANFKETQIKKFQPGMKVEIQFDA---IPKKTFYGKIRNISPATGSKFTLIPPDNATGNF 245

Query: 387 YEVILKITDLAFSDNNI-ELRNGFPAEVLFTAKNT 420
            +++ ++  L   D  +  L  G    V       
Sbjct: 246 TKIVQRVPVLIDFDAPVANLIPGMSVIVSIRTDQK 280


>gi|182419401|ref|ZP_02950653.1| putative auxiliary transport protein, membrane fusion protein
           family [Clostridium butyricum 5521]
 gi|237666915|ref|ZP_04526900.1| putative auxiliary transport protein, MFP family [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182376732|gb|EDT74304.1| putative auxiliary transport protein, membrane fusion protein
           family [Clostridium butyricum 5521]
 gi|237658114|gb|EEP55669.1| putative auxiliary transport protein, MFP family [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 416

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 114/356 (32%), Gaps = 84/356 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I++  V+ G ++ +G  LL  +  +                                
Sbjct: 67  GGTIEEMNVQLGEKVTKGQTLLKIKGTD-------------------------------- 94

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              +E + +S +  +      Y+ +     +  +++    L+  LT  +  Y   +    
Sbjct: 95  ---IENSIKSAQAAVNSAQAAYNDS-----DVSMANTENQLESGLTNAKVAYDKAV---- 142

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 +     ++       L+E  A+S+ND  Q +  + ++   + +         + 
Sbjct: 143 ------SGYEETKRQFDNTTQLYEAGAISENDYKQAKANLEQTQRSVDQAKASLDAAQKS 196

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            +                   + E  +         L      R++ T+ SP+ G I   
Sbjct: 197 YDTGVG---------------NRESAKAAIESAKVGLESALSNRDKLTLQSPVDGVITA- 240

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++F  +  A Q QP   I+    +  I   +T   I    +G T +V+        E+  
Sbjct: 241 KNFDVNEMATQGQP-AFIISSPDILQIDLSITQADIGKFSEGQTVSVKID------EQVI 293

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              +  +  +         +   Y+V + I      ++  + ++G  AEV  + + 
Sbjct: 294 DGTVNYVPTVAD------ASSSLYKVEVLID-----NSEGQFKSGMSAEVEVSIEK 338


>gi|322434981|ref|YP_004217193.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX9]
 gi|321162708|gb|ADW68413.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX9]
          Length = 454

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/390 (13%), Positives = 126/390 (32%), Gaps = 56/390 (14%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + ++ +I S  +G +     E+ +++ +G  L+  +          K   +   +    
Sbjct: 80  VDGDIYQISSRITGQVIHVYAEDNTKVNKGDLLIEIDP---------KDYQVALEQAQAA 130

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              +  D+ N   +V   +  S                    N  +S+    ++   + +
Sbjct: 131 LASAQADYTNANVNVPITSTTS--------------------NTQVSTSNSDVRGSASSV 170

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL---NQQERIVYKSTL 228
                       +    +A      KD+     L EK+ +S+          R    + L
Sbjct: 171 TQAQQQAAAAAARVEQEQANAIKAAKDVERYTPLVEKDVISRQQYDAAIASSRASSAAVL 230

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E   N+  Q++ +    +  D++  +     K   + ++  Q      ++++   +   +
Sbjct: 231 EAENNLVAQQSAVTTAQQKLDQSRAQAMQAAKNGPQQVKAQQARAQSMLAQVKSAQAKVD 290

Query: 289 Q-------KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           Q         +++P +G I               Q L+ I+P +   ++ A     Q++ 
Sbjct: 291 QALLNLSYTRVVAPSSGVINKKSVV-VGANLAVGQDLLTIIPLTN-LWVTANFKETQLKG 348

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VIL 391
           + +     ++          +F   + +I      +         T  Y +      V +
Sbjct: 349 MHRCQEVGIKVDALGGR---EFSGKVTQIGGATGSRLSLFPPENATGNYVKVVQRIPVRI 405

Query: 392 KITDLAFSDNNIELRNGFPA--EVLFTAKN 419
             T+L   + +  LR GF    +V    K+
Sbjct: 406 DFTNLDKENGDYALRPGFSVTPDVTIKGKD 435


>gi|330995831|ref|ZP_08319728.1| efflux transporter, RND family, MFP subunit [Paraprevotella
           xylaniphila YIT 11841]
 gi|329574561|gb|EGG56126.1| efflux transporter, RND family, MFP subunit [Paraprevotella
           xylaniphila YIT 11841]
          Length = 388

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 76/223 (34%), Gaps = 17/223 (7%)

Query: 204 NLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLK 260
           +L +K   +++ D       +  +   L     E      +    +  +E  L   N  +
Sbjct: 78  SLVKKGQVIAELDKTTLNSELNSARANLASAKSELDYQTANYKRYKTLNEKGLVSRNDYE 137

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--L 318
               D  +   T+      +   E      TI SPI G ++  +       A   +   L
Sbjct: 138 VAYLDYRKALETYNTTKESVKKAETNIGYATITSPIDGIVLSKEVEEGQTVAASFETPTL 197

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             I        + A +    I +VK+G   T     Y +     F   + ++    ++ D
Sbjct: 198 FTIAKDLTDMRVIADIDEADIGNVKEGQNVTFTVDAYPNDT---FHGQVTQVRQEATETD 254

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           N +     YEV++        +N+++L+ G  A V  +    T
Sbjct: 255 NVIT----YEVVISAP-----NNDLKLKPGLTANVSVSTLERT 288



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 65/171 (38%), Gaps = 4/171 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII    V+  S + +G  +   +       ++  
Sbjct: 43  IRNSVTATGTIEPVTEV-EVGTQVSGIISNIYVDYNSLVKKGQVIAELDKTTLNSELNSA 101

Query: 100 KVSIKNLRCHIDTEKS---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + ++ + +  +D + +       LN K  V    +E         L  Y++T   V    
Sbjct: 102 RANLASAKSELDYQTANYKRYKTLNEKGLVSRNDYEVAYLDYRKALETYNTTKESVKKAE 161

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            +  Y ++   +  +             +S     L +  KDLT M+ + +
Sbjct: 162 TNIGYATITSPIDGIVLSKEVEEGQTVAASFETPTLFTIAKDLTDMRVIAD 212


>gi|121534071|ref|ZP_01665896.1| efflux transporter, RND family, MFP subunit [Thermosinus
           carboxydivorans Nor1]
 gi|121307174|gb|EAX48091.1| efflux transporter, RND family, MFP subunit [Thermosinus
           carboxydivorans Nor1]
          Length = 358

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 86/263 (32%), Gaps = 21/263 (7%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           RS+ + R D+ +  S    +   +  D++  +  L ++  V++ND  +  +++       
Sbjct: 43  RSVAVERGDITSVVSATGTIKPVNSVDISSKITGLIKEVRVAENDQVKAGQVLIVLDDTH 102

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +  Q            E +   A       + L+  +  +    +     +   E  
Sbjct: 103 LRALVNQAAARLANAAANLERSQRLAAIGAISQQQLDAARMDYDVAKAAYDDAQSQLEDT 162

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQS----QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           TI +PI G ++     +              LM I        I  ++    I  VK G 
Sbjct: 163 TIKAPIDGKVIGKPIPA-GQTVAPGISNPMVLMTIA-DMSKMQIETQIDESDIGKVKVGQ 220

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            AT     Y       F  ++  I    S Q N +    YY VI+ +   A       L+
Sbjct: 221 KATFTVDAYPGQT---FSGVVSSISEKASIQQNVV----YYPVIIDVETGAGL-----LK 268

Query: 407 NGFPAEVLFTAKNT--TLAQEII 427
               A V      +  TL   ++
Sbjct: 269 PTMTARVSILVGESKNTLLVPLM 291



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 60/161 (37%), Gaps = 24/161 (14%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITW-----SILLP--------IEISVSSSGE 49
             +W+ L ++    +  + +   +     + W     + +          I   VS++G 
Sbjct: 2   QALWRKLLQHKKWWILLIIIAVAVKFGAPLLWTEPKPATVGRSVAVERGDITSVVSATGT 61

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-------- 101
           I    N V+I S  +G+IK+ +V    Q+  G  L+  +D     L++            
Sbjct: 62  IKPV-NSVDISSKITGLIKEVRVAENDQVKAGQVLIVLDDTHLRALVNQAAARLANAAAN 120

Query: 102 --SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
               + L       +  LD     YDV + A++  + QL D
Sbjct: 121 LERSQRLAAIGAISQQQLDAARMDYDVAKAAYDDAQSQLED 161


>gi|307295673|ref|ZP_07575506.1| secretion protein HlyD family protein [Sphingobium chlorophenolicum
           L-1]
 gi|306878329|gb|EFN09550.1| secretion protein HlyD family protein [Sphingobium chlorophenolicum
           L-1]
          Length = 383

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 88/302 (29%), Gaps = 28/302 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E       + L+    + +   +      I     S      ++          + + 
Sbjct: 81  VEENQDVKAGQPLVQIDPRDYRAQAAQSVAQIDVARASAAGVAAQIEEQRAAIAQAKAER 140

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A  +    +    + L    A ++  L++ +    ++            +  + + 
Sbjct: 141 DAANANAAFAASEAERYRPLAASGAETRERLSELQNQATQAKARAAAAQAALTSAQKRVA 200

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L                  + Q Q       ++L+      E   + + + G I  ++S
Sbjct: 201 TL---------------EAQVRQAQAQGEAARAQLSAANTDVEATILRAAVDGRI-GDRS 244

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                + Q +  LM +VP     Y+ A     Q+  ++ G   T+       +   + + 
Sbjct: 245 VRQGQFIQAATRLMTLVPS-ASLYVEANFKETQLGLMRVGQPVTIEVDALPGV---ELRG 300

Query: 366 IIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +  I P        +  Q      T+    + ++I   A  +    L  G   EV    
Sbjct: 301 RVASIAPGTGAQFSVLPPQNATGNFTKIVQRIPVRIAIDAGPETRKLLVPGMSVEVSVDT 360

Query: 418 KN 419
           ++
Sbjct: 361 RS 362



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/252 (11%), Positives = 64/252 (25%), Gaps = 7/252 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-----NL 106
            + + + I    SG + +  VE    +  G PL+  +  +           I        
Sbjct: 61  VQSDSITIAPKVSGYVDRVFVEENQDVKAGQPLVQIDPRDYRAQAAQSVAQIDVARASAA 120

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                 E+        K +       +          +  +         +S +      
Sbjct: 121 GVAAQIEEQRAAIAQAKAERDAANANAAFAASEAERYRPLAASGAETRERLSELQNQATQ 180

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R  +        + + + L A +   Q      +      A +  +       V   
Sbjct: 181 AKARAAAAQAALTSAQKRVATLEAQVRQAQAQGEAARAQL-SAANTDVEATILRAAVDGR 239

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             +      +       +  L   A+L      KE    L +  +    E+  L  +E  
Sbjct: 240 IGDRSVRQGQFIQAATRLMTLVPSASLYVEANFKETQLGLMRVGQPVTIEVDALPGVELR 299

Query: 287 REQKTILSPIAG 298
               +I +P  G
Sbjct: 300 GRVASI-APGTG 310


>gi|283780731|ref|YP_003371486.1| secretion protein HlyD [Pirellula staleyi DSM 6068]
 gi|283439184|gb|ADB17626.1| secretion protein HlyD family protein [Pirellula staleyi DSM 6068]
          Length = 541

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 112/373 (30%), Gaps = 91/373 (24%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G I     +  +    SG+I   QVE G ++ QG  L   E ++              
Sbjct: 183 AKGYITPAHQI-LVSPKVSGMITTLQVEEGRRVEQGEVLAILEMVDYEA----------- 230

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                D  ++       +  + E    +R E++                           
Sbjct: 231 -----DAARARATVRLARERLRELENGNRPEEI--------------------------- 258

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                           E + +  RA L   + D      L + NA+S  +L + E     
Sbjct: 259 -------------SQAEAELNEARATLPRLESDYKRNSELKQNNAISAQELQESESDYLS 305

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +   +      Q   L  I    +   +           +LEQ +   AD+M      E 
Sbjct: 306 AVQRVERLT--QAVRLMRIGARIERVEI--------ARAELEQAE---ADQMK----AEW 348

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQ-----SQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                TI +PI+GTI+   +    N         S  L ++   S    +   +  ++I 
Sbjct: 349 RLGNCTIRAPISGTILKKNA-EVGNLVNPVAFNGSFSLCEMADLSD-LEVDLNIQEREIS 406

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            V  G    +R   Y        +  ++++ PI  +    +       V +KI       
Sbjct: 407 AVFVGQKCRIRAEAYPQRDY---EGYVDRLMPIADRAKGAIPV----RVKVKIPADE--- 456

Query: 401 NNIELRNGFPAEV 413
             I L+    A V
Sbjct: 457 EGIYLKPEMGAIV 469


>gi|167622445|ref|YP_001672739.1| secretion protein HlyD family protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167352467|gb|ABZ75080.1| secretion protein HlyD family protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 357

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/341 (13%), Positives = 104/341 (30%), Gaps = 34/341 (9%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            +  +        +++   HI  +           D           QL D   +     
Sbjct: 26  TQVRNFESTDNAYVESDISHISVKVPGYVTATFVTDNQHVKKGQLLAQLEDNQFRAKVAQ 85

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           ++       +  ++L  ++   +++       +       A     Q+ LT    L  KN
Sbjct: 86  NQAVLASAKAKLQTLNAQIDLQQALITQ---AQASVVAAEAERVRSQQQLTRATKLKVKN 142

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             SQ+ +++ +     +T  + E         R +               K  +  L + 
Sbjct: 143 YSSQDAVDEAQAAFESATAHVDEIHAVLVAKQREL---------------KVFNAQLVEA 187

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
             +     + L + +       I +P  G I   +      Y Q  Q +  +VP  +  +
Sbjct: 188 DSSVEQAKAGLQLAQIQLADTQITAPFTGII-GKRGAQQGQYVQPGQAIYSLVP-DEAVW 245

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNL 381
           I A     QI  +  G   T+    ++    K+F  +I+ + P          ++     
Sbjct: 246 ITANFKETQIAKMHAGQKVTIELDAFS---GKEFSGVIDSLSPASGAKFSLLPAENATGN 302

Query: 382 QTQEYYEVILKI---TDLAFSDNNIELRNGFPAEVLFTAKN 419
            T+    + ++I   ++ A       +  G  A V     +
Sbjct: 303 FTKIVQRIPVRIRLDSNAAEKLEQGRIVPGLSALVKVDTAS 343



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 74/253 (29%), Gaps = 9/253 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E ++  I     G +    V +   + +G  L   ED +    +   +  + + +  + 
Sbjct: 39  VESDISHISVKVPGYVTATFVTDNQHVKKGQLLAQLEDNQFRAKVAQNQAVLASAKAKLQ 98

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T  + +D         + +  + E +      +   T +        S   ++       
Sbjct: 99  TLNAQIDLQQALITQAQASVVAAEAE--RVRSQQQLTRATKLKVKNYSSQDAVDEAQAAF 156

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            S   +  ++       +  L      L    +  E+ A +   L Q +    + T    
Sbjct: 157 ESATAHVDEIHAVLVAKQRELKVFNAQLVEADSSVEQ-AKAGLQLAQIQLADTQITAPFT 215

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             I ++        +          +    I+ + ++ Q        K+TI       K 
Sbjct: 216 GIIGKRGAQQGQYVQPGQAIYSLVPDEAVWITANFKETQIAKMHAGQKVTIELDAFSGKE 275

Query: 292 I------LSPIAG 298
                  LSP +G
Sbjct: 276 FSGVIDSLSPASG 288


>gi|118590415|ref|ZP_01547817.1| hypothetical protein SIAM614_02531 [Stappia aggregata IAM 12614]
 gi|118436878|gb|EAV43517.1| hypothetical protein SIAM614_02531 [Stappia aggregata IAM 12614]
          Length = 374

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 56/386 (14%), Positives = 118/386 (30%), Gaps = 81/386 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NV+++    SG I +  + +   +  G  L   +           +      R  +D
Sbjct: 39  VRANVIQVAPRVSGPIIELSITDNQFVTAGDLLFRIDP-------RTYEAQYARARAELD 91

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +S L  L                                         R ++     +
Sbjct: 92  RTQSDLVALA----------------------------------------RQVEAAQASV 111

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV---YKSTL 228
           R   +     E++    RA  ++ ++ L   + L E+   SQ   +  ER       +  
Sbjct: 112 RQYEVAITAAESEVKATRANRTASERTLERSRILMERGDTSQAQFDTAEREYLVNLATEQ 171

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +    +   ++ L        +A  +     +E +              + L       E
Sbjct: 172 KAEAALLSARSALTQATATLAQAEAQLGAPGEENAL--------LRSAKADLEQARLELE 223

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              + + + G +   Q     +    +QP+M ++  S   +I A     Q++ ++ G  A
Sbjct: 224 FTEVRASVDGMVTNLQPR-IGSQVVANQPIMALI-DSGSFWIDAYFRETQLERMRAGNQA 281

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ---------------EYYEVILKI 393
            V    Y D      +A ++ I   I++QD +                   +   V +++
Sbjct: 282 FVTLMSYPDTI---IEASVDSIGWGIAKQDGSTSQNLLPSVSPTFEWIRLAQRIPVRIRL 338

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN 419
             +    + +ELR G  A VL   + 
Sbjct: 339 DAV---PDTVELRVGSTASVLVRTQE 361


>gi|113970437|ref|YP_734230.1| secretion protein HlyD family protein [Shewanella sp. MR-4]
 gi|113885121|gb|ABI39173.1| secretion protein HlyD family protein [Shewanella sp. MR-4]
          Length = 351

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 101/295 (34%), Gaps = 33/295 (11%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E++  +    L +      KV     S+    +K  L  +++ Y  +   + + +L    
Sbjct: 72  ENQRVEKGQVLFRLDDAMFKVMVDKASAKLAQVKTDLAVLKASYHEK---QAEITLAETK 128

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+  +K+    +NL  K+ VS++ L    +    +    R+NI   +  L  I E    +
Sbjct: 129 LTFAEKEQKRQENLIGKHFVSESQLEDARQNTDIA----RQNIQTLQKDLHRIAESLGGS 184

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                           +   ++ + +++L   +    +  I +P++G +          Y
Sbjct: 185 PDFPI-----------EQHPSYLEALAQLNEAKLDLSRVEIKAPVSGVVSQLP--KLGQY 231

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                  + +V      +I A  T   + HVK G    +    + D R   ++  +E + 
Sbjct: 232 VNVGAIALALV-ADHALWIEANFTETDLTHVKPGQKVNIHIDTFPDNR---WQGTVESLS 287

Query: 372 PII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           P          +Q       +    V ++I           LR G  A V    +
Sbjct: 288 PATGAEFSLIPAQNATGNWVKIAQRVPVRIAIDTVLPE-APLRAGLSAVVDIDTE 341



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 71/195 (36%), Gaps = 13/195 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + + V + +  +G +    V    ++ +G  L   +D     ++D     +  ++  + 
Sbjct: 50  VKADKVPVSAQVAGNVDSLYVVENQRVEKGQVLFRLDDAMFKVMVDKASAKLAQVKTDLA 109

Query: 112 TEKSALDFLNNKYDVLEKAF---ESREEQLLDFLGKYHSTCSKVFNYGI-----SSVYRS 163
             K++      +  + E      E  +++  + +GK+  + S++ +            ++
Sbjct: 110 VLKASYHEKQAEITLAETKLTFAEKEQKRQENLIGKHFVSESQLEDARQNTDIARQNIQT 169

Query: 164 LKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQ 218
           L+  L R+        D  +E   S L AL   ++  L + +   +      VSQ     
Sbjct: 170 LQKDLHRIAESLGGSPDFPIEQHPSYLEALAQLNEAKLDLSRVEIKAPVSGVVSQLPKLG 229

Query: 219 QERIVYKSTLELREN 233
           Q   V    L L  +
Sbjct: 230 QYVNVGAIALALVAD 244


>gi|326402486|ref|YP_004282567.1| macrolide export protein MacA [Acidiphilium multivorum AIU301]
 gi|325049347|dbj|BAJ79685.1| macrolide export protein MacA [Acidiphilium multivorum AIU301]
          Length = 412

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 21/214 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           AV Q  L + E  +  +    R N     +++       + A+   A Y +++      +
Sbjct: 135 AVDQAQLRKDEASLDYA----RGNYRRLASLVPQRYASENAADSAKATY-RQLEAQAALD 189

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSK 326
           +     + +KL   +       I+SP+ G +V     +       S     L  I     
Sbjct: 190 RAVIRQDEAKLAAAQANLGYTDIVSPVNGIVVSRNV-TIGQTVAASFQTPTLFLIATDLT 248

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              +   V+   I  ++KG  A      +       F   + ++     Q    +Q    
Sbjct: 249 RMQVDTNVSEGDIADIRKGEAARFTVLAFPGET---FDGTVTQV----RQSPQTVQNVVT 301

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           Y+V++++      + +++L+ G  A V       
Sbjct: 302 YDVVIEVD-----NRDLKLKPGMTASVRIITAAR 330



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 49/135 (36%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +V+++G +     V  + S  SGII+    +  + +  G      +      ++D  
Sbjct: 72  ITRAVTATGTVNPILTV-IVGSAVSGIIQDISCDYNTIVKLGQICARIDPRPYQAVVDQD 130

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI-S 158
           + ++   +  +  ++++LD+    Y  L      R            +         +  
Sbjct: 131 RAAVAVDQAQLRKDEASLDYARGNYRRLASLVPQRYASENAADSAKATYRQLEAQAALDR 190

Query: 159 SVYRSLKMKLTRMRS 173
           +V R  + KL   ++
Sbjct: 191 AVIRQDEAKLAAAQA 205


>gi|293608035|ref|ZP_06690338.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828608|gb|EFF86970.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 361

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/409 (13%), Positives = 116/409 (28%), Gaps = 88/409 (21%)

Query: 20  MTLLSIIGIIGLITW---SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +  ++ I ++  I W    I LP  +  +    +  E +   I    SG I++  +++  
Sbjct: 28  VMAIAFIIVLASILWVLKLIFLPSSVVETDDARVDVEYS--TIAPKVSGNIEEIYIKDHQ 85

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L                         ID                         
Sbjct: 86  TVKKGQLL-----------------------ARIDAR----------------------- 99

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              D+        S             L   +  +        + E +   + A +   +
Sbjct: 100 ---DYQAALAEAESNYAKAQ-----ADLSEAMLAVDRQPTIIRETEAQLRKVEAGIKLTK 151

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +    + L    A S+    Q +  + +   +L  +  +  +    +N+   +   + A
Sbjct: 152 DNTARYEQLQALGAESRLITQQSKTTLTEQYADLDSSKEKVIDAQYQLNQYKIQVQAKQA 211

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              +  +                    +       + +PI G I   +S +  N+     
Sbjct: 212 ALKQAQAAL---------------DKAKLNLSYTEVRAPIDGMI-GQKSANVGNFVSAGN 255

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK------- 369
           PLM +VP     Y+ A     +++ +K G    V    Y      + K +++        
Sbjct: 256 PLMVVVPLD-QVYVEANFREIELKKIKIGQPVNVYVDAYN----VELKGVVDSFSPSTGA 310

Query: 370 -IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
              PI +       T+    + L+I  +    +   LR G    V    
Sbjct: 311 FFSPISATNATGNFTKIVQRLPLRIKLIENQKDVKLLRPGLSVLVSIDT 359


>gi|219848579|ref|YP_002463012.1| RND family efflux transporter MFP subunit [Chloroflexus aggregans
           DSM 9485]
 gi|219542838|gb|ACL24576.1| efflux transporter, RND family, MFP subunit [Chloroflexus aggregans
           DSM 9485]
          Length = 608

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/342 (9%), Positives = 111/342 (32%), Gaps = 26/342 (7%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           I+    +D    ++++ R  +   K+  +    +     +  ++   ++ +   +     
Sbjct: 191 IQAQAQVDQAIAALQSQRDSLSAAKTRAESQLFQAANTLRDRQAEYSRIYNDNREREQQL 250

Query: 150 SK----VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           ++    +    + +   +L+        +   ++  E         ++  +  +   +  
Sbjct: 251 ARFGQSLPQSALDNEAAALRAVQNAEEQMRQAQVAYEQAKQAEITGIAQAEAQVRSAQAN 310

Query: 206 FEKNAV--SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-- 261
            ++      ++ +      + ++   L + + +Q+       +    +       +K   
Sbjct: 311 LDRVLAGADRDQIAAARAQLAQAEANLNKLLGDQRAGSLAAAQAAVASAQANLQRVKAPP 370

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI--VYNQSFSSSNYAQQSQPLM 319
              DL   +   A+  + L   +   E+ T+++PI G +  V  +     N A+ +  L 
Sbjct: 371 SDADLASAEAQVANARASLAQAQLALERATLVAPINGVVAEVNLEVGELYNAARPAIVLA 430

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +       Y+   V    +  +  G    +      ++   + +  + +I+P+ + Q  
Sbjct: 431 DL----SGYYVDVTVDEIDVAQIAVGQQVILTLDALPNL---ELRGTVARINPLSTVQSG 483

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                  Y V +   D   +     +R G  A         +
Sbjct: 484 VTA----YIVRIVTNDPPAA-----VRPGMSASADIIVAEKS 516



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 90/261 (34%), Gaps = 7/261 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PI   V++SG I     V+++    SG+I +  V+ G  +  G PL   +  +    ++
Sbjct: 55  GPISAVVNASGTIQP-QQVLDLTFTSSGLISEVLVKIGDTVSAGQPLARLDTRDLELRVE 113

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                +   + ++D  ++     +      + A    + +    +G             +
Sbjct: 114 QSAAQLAQAQANLDRLRAGPTEADIAAADAQLAQAQAQLRQT--MGNVTEQDLAAARAQV 171

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV-SQNDL 216
                +L+  L   ++  +  +  + +     A L S +  L+  K   E     + N L
Sbjct: 172 EQARANLERLLGGPKASEV--IQAQAQVDQAIAALQSQRDSLSAAKTRAESQLFQAANTL 229

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             ++    +   + RE   +     + + +   +        ++     + Q Q  + ++
Sbjct: 230 RDRQAEYSRIYNDNREREQQLARFGQSLPQSALDNEAAALRAVQNAEEQMRQAQVAY-EQ 288

Query: 277 MSKLTILEKTREQKTILSPIA 297
             +  I    + +  + S  A
Sbjct: 289 AKQAEITGIAQAEAQVRSAQA 309


>gi|269120096|ref|YP_003308273.1| secretion protein HlyD [Sebaldella termitidis ATCC 33386]
 gi|268613974|gb|ACZ08342.1| secretion protein HlyD family protein [Sebaldella termitidis ATCC
           33386]
          Length = 349

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 116/356 (32%), Gaps = 87/356 (24%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I +  VE G  + +G  L + +       I+  K  I+     +   K+          
Sbjct: 62  RIDQIYVEEGDIVKKGQLLASLDTENIKLQIEKNKSQIEAQESIVSRLKNG--------- 112

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                  SR ++    L K ++  ++  N  I         +L R+ + Y +        
Sbjct: 113 -------SRPQEKSQMLAKVNAAKAEAQNAKI---------QLQRIENAYNDSDG----- 151

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK-NMLRHI 244
                                   +VS+ +++        ++  ++E     +  +L   
Sbjct: 152 -----------------------RSVSKQEIDNARSNFKVTSARVKETSESYRLAVLGPR 188

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E   EA         E++                    E   EQ  + SPI G I  ++
Sbjct: 189 KEEITEAEARLKAEKAELAIQ------------------EYLLEQAQLKSPIDGVI-RSR 229

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                + A   Q +  ++  +   ++RA +  KQ+ ++ +G   +V    Y+D   K  K
Sbjct: 230 LQEPGDMASP-QQITFLLAVNDKKWVRAYIQEKQLGYINEGMEVSVYIDSYSD---KPIK 285

Query: 365 AIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             I  I  +      + Q   L+T   YE+ + + D         LR G PA +  
Sbjct: 286 GQIGYISSVAEFTPKTVQTAELRTSLLYEIRVYVKDSEDI-----LRMGMPATIKI 336


>gi|126172732|ref|YP_001048881.1| secretion protein HlyD family protein [Shewanella baltica OS155]
 gi|125995937|gb|ABN60012.1| secretion protein HlyD family protein [Shewanella baltica OS155]
          Length = 352

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 60/328 (18%), Positives = 112/328 (34%), Gaps = 31/328 (9%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC-SKVFNYGISSVYRSLKM 166
            +++ + S +      Y VL    +++  Q  + L +      S   +   +S+  S   
Sbjct: 37  AYVEADISHISVKVPGYVVLSDVTDNQHVQKGELLAQLEDNQFSAKVSQAEASLASSKAD 96

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLS---SHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
             T    + L R  +   S+ + A  S     Q+ L+  K L   N  SQ+D++Q +   
Sbjct: 97  LQTLAAKVELQRALITQASAGVVAAESDKIRAQQQLSRSKKLKVSNYSSQDDVDQLQAGF 156

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +   L E         R +                  +  L+Q         + L + 
Sbjct: 157 DSAAARLDEAKAVLVAKQRELAV---------------FNAQLDQAGSVVEQADATLELA 201

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +       + +P +G I   +      Y Q  Q L  +VP     +I A     QIQH++
Sbjct: 202 KIQLNDTRVTAPFSGVI-GKRGAMVGQYVQPGQALYSLVP-DGAVWITANFKETQIQHMQ 259

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DL 396
            G +  V    + D   K F  +I+ + P    +         T  + +++ +I     L
Sbjct: 260 PGQSVLVSLDAFPD---KTFIGVIDSLSPASGAKFSLLPAENATGNFTKIVQRIPVRIRL 316

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             S+    +  G  A V     + T   
Sbjct: 317 DLSEEEAHMLPGLSAVVKVDTASGTAIS 344


>gi|170721675|ref|YP_001749363.1| secretion protein HlyD family protein [Pseudomonas putida W619]
 gi|169759678|gb|ACA72994.1| secretion protein HlyD family protein [Pseudomonas putida W619]
          Length = 377

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/424 (12%), Positives = 120/424 (28%), Gaps = 91/424 (21%)

Query: 12  NHPASLKRMTLLSIIGIIG-------LITWSI-LLPIEISVSSSGEILNEDNVVEIKSPF 63
             P   +R+ +LS +           L+ ++  L P   ++ S+   +    V  I    
Sbjct: 27  TSPVRTRRVRILSSVMFACVALAGILLVLYAWRLPPFGSAIESTENAMVRGQVTIIGPQL 86

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V +   +  G  L+  +D        + K  +      +  E++AL     +
Sbjct: 87  SGYVVDVPVHDFQFVKAGDLLVQLDD-------RIYKQRLAQAIAQLQQEQAALANNLQQ 139

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +  E     R+  + D   +     +                                 
Sbjct: 140 RNSAEATIAQRQAAIGDAKAQAEKARA--------------------------------- 166

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                         DL+  + L    +VS+ DL+                    +     
Sbjct: 167 --------------DLSRNQALVSDGSVSRRDLDVTR---------------ASQAAAVA 197

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                  A        + +  +    + +  +  + + +     +   + +P  G +   
Sbjct: 198 TLAQAKAALAIARQDRETVIVNRAALEASVENAKAAVELARIDLDNTRVTAPRDGQLGQI 257

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            +     Y      LM +VP     ++ A +   Q+  V+ G   T        ++    
Sbjct: 258 GTR-LGAYVNSGAQLMALVP--DTVWVIANMKETQMADVRIGQPVTFTVDALNHLK---L 311

Query: 364 KAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLF 415
           +  +++I P    +      +  T  + ++     ++IT  A       L  G    V  
Sbjct: 312 RGHVQQISPATGSEFALLQADNATGNFVKIAQRIPVRITVDADQPAARRLSPGMSVVVSI 371

Query: 416 TAKN 419
             ++
Sbjct: 372 DTRD 375


>gi|148259326|ref|YP_001233453.1| RND family efflux transporter MFP subunit [Acidiphilium cryptum
           JF-5]
 gi|146401007|gb|ABQ29534.1| efflux transporter, RND family, MFP subunit [Acidiphilium cryptum
           JF-5]
          Length = 413

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 73/214 (34%), Gaps = 21/214 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           AV Q  L + E  +  +    R N     +++       + A+   A Y +++      +
Sbjct: 136 AVDQAQLRKDEASLDYA----RGNYRRLASLVPQRYASENAADSAKATY-RQLEAQTALD 190

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSK 326
           +     + +KL   +       I+SP+ G +V     +       S     L  I     
Sbjct: 191 RAVIRQDEAKLAAAQANLGYTDIVSPVNGIVVSRNV-TIGQTVAASFQTPTLFLIATDLT 249

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              +   V+   I  ++KG  A      +       F   + ++     Q    +Q    
Sbjct: 250 RMQVDTNVSEGDIADIRKGEAARFTVLAFPGET---FDGTVTQV----RQSPQTVQNVVT 302

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           Y+V++++      + +++L+ G  A V       
Sbjct: 303 YDVVIEVD-----NRDLKLKPGMTASVRIITAAR 331



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 49/135 (36%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +V+++G +     V  + S  SGII+    +  + +  G      +      ++D  
Sbjct: 73  ITRAVTATGTVNPILTV-IVGSAVSGIIQDISCDYNTIVKLGQICARIDPRPYQAVVDQD 131

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI-S 158
           + ++   +  +  ++++LD+    Y  L      R            +         +  
Sbjct: 132 RAAVAVDQAQLRKDEASLDYARGNYRRLASLVPQRYASENAADSAKATYRQLEAQTALDR 191

Query: 159 SVYRSLKMKLTRMRS 173
           +V R  + KL   ++
Sbjct: 192 AVIRQDEAKLAAAQA 206


>gi|291286729|ref|YP_003503545.1| secretion protein HlyD family protein [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290883889|gb|ADD67589.1| secretion protein HlyD family protein [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 343

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 104/355 (29%), Gaps = 74/355 (20%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I K   + G  I     + T +D++    +   +  +      +            
Sbjct: 50  TSGRIDKIYYDEGDDIPLDAVVSTLDDVDERLAVTAAEAELAYRNAEL------------ 97

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                                      S+V         R+ K  L +           +
Sbjct: 98  ---------------------------SEVLAGSRKQEIRNAKAALDKA----------Q 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                  A LS  Q D    + LF +N VS+      +    K+     E    ++    
Sbjct: 121 AAVKSASAELSQAQSDEERFRALFAENGVSKRTYELYKTAYEKAKHTYEEAKAAERQTEE 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++   + A  E     K +    EQ           L   ++  E  T+ SPI+GT++ 
Sbjct: 181 SLSLAIEGARNEAITKAKAVVSISEQA----------LMQAKQKLEYTTLKSPISGTVLT 230

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +      + Q    ++  V      +IR  V+   +  +K G    +    + +     
Sbjct: 231 -KVAEEGEFIQTGSVILT-VSDLSDMWIRGYVSEPYLGKIKLGQKVEIVSDSHPNKTY-- 286

Query: 363 FKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRNGFPAE 412
               I  I          +QT +      Y + + + + A      EL+ G P E
Sbjct: 287 -TGEITYISSEAEFTPKTVQTYDERINFMYRIKVTVDNSAR-----ELKQGMPVE 335


>gi|298383959|ref|ZP_06993520.1| hemolysin secretion protein [Bacteroides sp. 1_1_14]
 gi|298263563|gb|EFI06426.1| hemolysin secretion protein [Bacteroides sp. 1_1_14]
          Length = 446

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/361 (12%), Positives = 121/361 (33%), Gaps = 24/361 (6%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++ +G  +   ++  +T+ +      I +L   ID + + L  L + +       E   
Sbjct: 95  EEVKKGEYIAVVQNPASTEDVR----KIADLINRIDFDGTHLLALKDTFPDKVYLGEINP 150

Query: 136 E---QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +    L     +       V+     ++  S++ K   +R    ++   +++  + R  L
Sbjct: 151 QYYAFLAALKAQCDYLQQNVYEKQRENITTSIEWKKKIVREAEDSQKAAKDRMDVARKWL 210

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
             +           ++ A  + + +Q +     +  E++    E  +    I E Y    
Sbjct: 211 KRYVSLDQ------QEIATYEYETDQIKNNYLTTVQEVQNINREIASTRMQITEAYHRLE 264

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                 L++      +   T  + ++ +   E+        +P  G + + +  S   + 
Sbjct: 265 QLEVEQLEKERELKVELLSTHQNLIANMAAWEQK---YVFKAPFDGKVEFLKFISDGQFV 321

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           Q  + +  ++P     Y +  +       VK+     ++  +Y  +     +  +  I  
Sbjct: 322 QAGEAVFGVIPKENHIYGQVLLPANGAGKVKENSKVVIKLENYPYMEYGYIEGYVSSISL 381

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIEL-----RNGFPAEVLFTAKNTTLAQEII 427
           +   Q    +T E Y + +++ +   ++    L       G         K+  L + + 
Sbjct: 382 VTQTQKTGEKTIETYLINVELPNGLTTNYEETLDFKYELGG---TADIIVKDRRLIERLF 438

Query: 428 H 428
            
Sbjct: 439 D 439


>gi|224538036|ref|ZP_03678575.1| hypothetical protein BACCELL_02925 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520326|gb|EEF89431.1| hypothetical protein BACCELL_02925 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 344

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 107/381 (28%), Gaps = 90/381 (23%)

Query: 48  GEILNEDNVVEIK------SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           G +   DN    +      S   G IKK   +   ++ +G  L+  ED E    +   + 
Sbjct: 33  GNVAYTDNAQVKQLIVPVNSRVQGFIKKIYFDEYREVHKGDTLVLIEDSEFRFRLAQAEA 92

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                                                              F   IS   
Sbjct: 93  D--------------------------------------------------FQNAISGKN 102

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                  T   +I ++   L+      +  L + +++    KNL  ++AV++   +  + 
Sbjct: 103 AVATTVHTTQNNIAVSDAGLQEA----KVRLDNAEREYHRYKNLLAQDAVTKQQYDAVQT 158

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               S                   EL            +E +  LEQ         + L 
Sbjct: 159 NYEASKARY---------------ELLLRQRQSTTLVKQEQTHRLEQTDAGIKLAQAALE 203

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +         IL+P  GT    +        Q  Q L+ IV  ++   + A     Q  H
Sbjct: 204 LARLNLSYTVILAPCDGT-TGRKEIQEGQLIQPGQTLVDIVDENERWIV-ANYKETQTTH 261

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPII----------SQQDNNLQTQEYYEVIL 391
           +++G    +       I    FK  ++ I              +   N ++ ++   V +
Sbjct: 262 IREGQPVEIEVDAVPGIT---FKGAVKSISRATGASFSLLPQDNSAGNFVKVEQRIPVRI 318

Query: 392 KITDLAFSDNNIELRNGFPAE 412
           + +     ++   LR G   E
Sbjct: 319 EFSTGNRPEDMERLRAGMNVE 339


>gi|308186187|ref|YP_003930318.1| Multidrug resistance protein A [Pantoea vagans C9-1]
 gi|308056697|gb|ADO08869.1| Multidrug resistance protein A [Pantoea vagans C9-1]
          Length = 384

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/357 (10%), Positives = 101/357 (28%), Gaps = 75/357 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E + V I    SG + K  V++  ++ +G  L+  +  +     +     +      +  
Sbjct: 80  EGDAVTIAPKASGYVVKLLVKDNQRVKKGDLLVEIDPSDNRAQREQANAQLGLAVAQL-- 137

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                                 + QL     +Y +   +       +    L  +    R
Sbjct: 138 -------------------HQAQAQLALSKVQYPAQRDQALADQAKAEANLLNAQADYRR 178

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                                              +    +      +R +  ++ +LR 
Sbjct: 179 Q----------------------------------RGVDPRA---TSQRNIDSASAQLRS 201

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + ++    +     E   + A  +++   ++E  Q+      ++L+  +       +
Sbjct: 202 AQAQLQSAKAQV-----EVASQVALQIRQQETNVEARQQQVEQAKAQLSTADLNLSYTQV 256

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G I            Q    L  +V  S   ++ A     Q+Q +  G    +  
Sbjct: 257 RAPYDGFITKRNV-QLGTLVQAGSSLFSLV--SPEIWVTANFKESQLQRMNPGDKVEISV 313

Query: 353 PHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             + D++    +  ++ I         +    N     Y +++ ++      D  ++
Sbjct: 314 DAWPDMK---LEGHVDSIQMGSGSRFSTFPSENATGN-YVKIVQRVPVKIVIDKGLD 366


>gi|299532530|ref|ZP_07045920.1| multidrug resistance protein VceA [Comamonas testosteroni S44]
 gi|298719477|gb|EFI60444.1| multidrug resistance protein VceA [Comamonas testosteroni S44]
          Length = 390

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/423 (12%), Positives = 117/423 (27%), Gaps = 75/423 (17%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R    +     L  ++ + G    +          S+        V ++     G + + 
Sbjct: 15  REQRRNRLLAGLAGVVLLGGAGAGAYWWMHASRFVSTDNAYAAAEVAQVTPSIGGTVLEV 74

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V +   + QG  LL  +  +    +   +  +      +    +    L  +    E  
Sbjct: 75  LVRDTQAVKQGDVLLRIDPTDARLALAQAEAELARAMRRVKGYVANDGGLKAQVTARE-- 132

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                                      +   R+    L     +    +DL+ + +    
Sbjct: 133 ---------------------------ADEKRAAAQLLAAEADMERATIDLQRRQA---- 161

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                         L    +VS  +L Q +     +  +L   +  Q     +       
Sbjct: 162 --------------LARSGSVSGEELTQAQNAFAAAKAQLASAVAAQAQARANREAAIGA 207

Query: 251 AN-----LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                  +E A+        L Q +R            +   ++ T+ +P+ G +V  +S
Sbjct: 208 KQVNATLIEGADAQSNPEVQLAQARR---------DQAQVDLDRSTVRAPVDG-VVARRS 257

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                  Q   PLM +VP  +  Y+ A     Q+  V+ G    ++   Y      K+  
Sbjct: 258 VQIGQRVQAGAPLMTVVPV-QRIYVDANFKEGQLGKVRVGQRVQLQSDLYGSDV--KYSG 314

Query: 366 IIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +              P  +   N ++  +   V +++     + N + +       V  
Sbjct: 315 TVVGFSGGSGSAFAAIPAQNATGNWIKVVQRLPVRIQLDAAELARNPLRVGLSMQVTVDT 374

Query: 416 TAK 418
            + 
Sbjct: 375 RSG 377


>gi|167621672|ref|YP_001672180.1| secretion protein HlyD family protein [Caulobacter sp. K31]
 gi|167351795|gb|ABZ74521.1| secretion protein HlyD family protein [Caulobacter sp. K31]
          Length = 324

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/356 (13%), Positives = 103/356 (28%), Gaps = 58/356 (16%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V+ G Q+ +G  L++ E  +    +     +I NLR                 
Sbjct: 18  GRIVQLDVKAGDQVKRGQLLVSIEPRDAQYSLAEIDANIANLRAQ--------------- 62

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                       QLL       +T         ++V  +    LTR   + + R   +  
Sbjct: 63  ----------RAQLLAQQSLVRNTVGNQAGVSSATVDSAQADYLTRQAELTVARAAFQR- 111

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                             + L+ K  V+++   + +  +  +                  
Sbjct: 112 -----------------TEILYGKGLVAKSRFEEDQARLRAAEQTAVRARAAISGAKAGA 154

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                E        ++ I+  +           ++         ++ I +   G I    
Sbjct: 155 -----EVTQTGLQQVQVIAEQIAGVDAQIDALAARREQQRLDLGRRQIAAAFNGVI-DQT 208

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
              +  Y      ++ +       ++   V   + + ++ G  A V+   Y       F 
Sbjct: 209 VVDAGEYVSPGSRIL-LYHDPHSVWVDVNVKETEFRKLRVGAPAKVKVDAYPGRT---FA 264

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLF 415
           A ++++    + Q     N   +  + +V  ++   LA       LR G  AEV  
Sbjct: 265 ARVQRLGGAATSQFALLPNPNPSGNFTKVTQRLPVRLAIIQQQNLLRPGMMAEVTI 320


>gi|78355718|ref|YP_387167.1| secretion protein HlyD [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218123|gb|ABB37472.1| Secretion protein HlyD [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 432

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 81/226 (35%), Gaps = 27/226 (11%)

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           S H +    +  L + + +++       R +       R +++E     + +  L  +  
Sbjct: 137 SQHVEQGQTVAELDKSDFITKV------RNIESQLGGARASLNEATLNFKRMETLLGQDT 190

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           +  A+Y K     ++           +L    +  E  T+ +P +G I      +     
Sbjct: 191 ISKADYDK-ARASMDNANAKVLSLTQQLKQATQDLEYTTLRAPFSGVIAKKYVKNY-ELV 248

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHV----KKGYTATV-RFPHYADIREKKFKAII 367
           Q  QP++K+  ++    +  +V    I  +    +K   A V RF  +            
Sbjct: 249 QAQQPVLKL-ENTDRLDVEVEVPEFVIAQLRHQDRKNMPAPVARFSAF--------PGRS 299

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            ++     Q   N QTQ Y    + +T  +   ++I L  G  A+V
Sbjct: 300 FELSLKEYQTSANPQTQTY---TVTLTMQS--PDDIRLLPGMTADV 340



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/156 (10%), Positives = 55/156 (35%), Gaps = 8/156 (5%)

Query: 41  EISV--SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +  V     G++      VE+    +G + +F V+    + QG  +   +  +    +  
Sbjct: 102 DKGVRRVFPGKV-VAGEKVELGFRVAGQLTRFPVKESQHVEQGQTVAELDKSDFITKVRN 160

Query: 99  KKVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            +  +   R  ++        ++ L  +  + +  ++     + +   K  S   ++   
Sbjct: 161 IESQLGGARASLNEATLNFKRMETLLGQDTISKADYDKARASMDNANAKVLSLTQQLKQA 220

Query: 156 GISSVYRSLKMKLTRM--RSIYLNRLDLENKSSLLR 189
                Y +L+   + +  +    N   ++ +  +L+
Sbjct: 221 TQDLEYTTLRAPFSGVIAKKYVKNYELVQAQQPVLK 256


>gi|312793716|ref|YP_004026639.1| secretion protein hlyd family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180856|gb|ADQ41026.1| secretion protein HlyD family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 358

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 65/403 (16%), Positives = 141/403 (34%), Gaps = 58/403 (14%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           K + L S   I   +        +  + SS     E   +++ S  +G I+K  VE GS+
Sbjct: 9   KLVLLASFCIIFLFLLTGCKAKNDEDIYSS---TVEVKNIDVNSEIAGRIEKVYVEEGSK 65

Query: 78  ILQGTPLLTFED--IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES-- 133
           + +G  +   +   +E    + L  + +  +   I   K AL         LE+  E+  
Sbjct: 66  VKRGDVIAKLDSGILEIQKNLALYNLEVAKISSEIAKLKYALVSKKPSKYQLEQLKENIF 125

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           + ++L     K  S   +     I ++  S    +  +  + +    LE ++  L   ++
Sbjct: 126 QLKELKAGNEKNISLLRQAI-EDIKAIRVSNPEMVKALTELKVQLNSLEVQNESLAHQIN 184

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           S +  L M+KN           +  +++ +Y  ++E+ +  + Q      I E       
Sbjct: 185 SLEVQLQMVKN---------ETVMPEDKSIYAISVEIAQKNYSQALEYVKIAEGN----- 230

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                                     L + E+  ++ TI+SP  G I   +      +  
Sbjct: 231 --------------------------LKLCEENLKKATIISPADGII-SIKGVEEGQFIG 263

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK-AIIEKIDP 372
               + +I       Y++  V   ++  V  G   ++           +     I  I  
Sbjct: 264 PGSFVAQI--SLDQYYLKIYVPSTKLGKVNIGKEVSI------ASESGQIAYGKIVYISD 315

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                  N++T+E  + ++ +  ++ + N   L+ G   +V+ 
Sbjct: 316 KAEFTPRNVETKEEKQKMVFMIKISITKNKEILKPGMIVDVIL 358


>gi|261210863|ref|ZP_05925153.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio sp. RC341]
 gi|260839838|gb|EEX66438.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio sp. RC341]
          Length = 329

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/372 (12%), Positives = 100/372 (26%), Gaps = 63/372 (16%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GII +  V +   + QG  L+  +D +        ++++      +   +  +      
Sbjct: 2   GGIIAQVNVVDTEYVKQGDVLVQLDDTDA-------RLALLQAEADLALAERRVRSYLAN 54

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            + L    E++E        ++ +  +      I                          
Sbjct: 55  DEGLTAMVEAQEANEQRVKAQFKAAQADFERAKI-------------------------- 88

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                         DL+  ++L    +VS  +L   +    ++                 
Sbjct: 89  --------------DLSRREDLVRSGSVSGEELTNAKTGFAQAQANFNAAKAAMAQAQAT 134

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                       A            +        ++    +   E+  I +PI+G +   
Sbjct: 135 KLSTIGSQKANAALTDNTTV----DSNPEVLLAKARYEQAKIDLERTVIRAPISGVVAKR 190

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--K 361
           Q        Q   PLM +VP     Y+ A     ++++VK G   T+    Y D      
Sbjct: 191 QV-QVGRRVQVGMPLMTVVPT-TQIYVDANFKEVELRNVKVGQPVTLTADLYGDEVTYHG 248

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN-----GFPAEVLF 415
                        S       T  + +V+ ++   +     +++           A V  
Sbjct: 249 VVVGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATVDT 308

Query: 416 --TAKNTTLAQE 425
                  TLAQ 
Sbjct: 309 AGNTDPQTLAQY 320


>gi|167582082|ref|ZP_02374956.1| multidrug resistance protein [Burkholderia thailandensis TXDOH]
          Length = 408

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 92/273 (33%), Gaps = 32/273 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D AN + A+           N    
Sbjct: 157 EE------------------ISHARDAVKAAQASLDAANQQLASNRALTGNTTIANHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+AG +   +S           PLM +VP +   +I A 
Sbjct: 199 LAAAAKVRDAYLNNARNTLPAPVAGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWIDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q++H++ G    +    Y      K+   +              P  +   N ++ 
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSV--KYHGKVVGFSAGTGAAFSLLPAQNATGNWIKV 314

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   V +++      D+ + +      +V   
Sbjct: 315 VQRLPVRIELDPKELKDHPLRIGLSMQVDVDIK 347



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 56/181 (30%), Gaps = 10/181 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                  +        + D+ +   + R    +   G             + +   SL  
Sbjct: 116 GLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASLDA 175

Query: 167 KLTRMRS--IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQER 221
              ++ S         + N  ++L A        L   +N         V++  +   +R
Sbjct: 176 ANQQLASNRALTGNTTIANHPNVLAAAAKVRDAYLNNARNTLPAPVAGYVAKRSVQVGQR 235

Query: 222 I 222
           +
Sbjct: 236 V 236


>gi|296132340|ref|YP_003639587.1| efflux transporter, RND family, MFP subunit [Thermincola sp. JR]
 gi|296030918|gb|ADG81686.1| efflux transporter, RND family, MFP subunit [Thermincola potens JR]
          Length = 425

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/375 (13%), Positives = 123/375 (32%), Gaps = 81/375 (21%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +G+++++    +I S   G +K   V+ G  + +G  L   +              +   
Sbjct: 62  TGKVVSDS-TEDIYSEIQGRVKAVYVDTGDSVEKGKLLAVID-----------VGELDTQ 109

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              ++ E                                           + SV    + 
Sbjct: 110 IARLEGE-------------------------------------------LKSVEGQEQT 126

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
            L+++ S  + + +L  + +  R  L   + +   +K L+ + A ++ +L+Q E  +   
Sbjct: 127 ALSQVDSNQIKQQELAVEQA--RVALGLAKANYERIKELYAQGAATRVELDQSEADLATR 184

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
               ++ + + +  L  + +    + L++    + +  +L   Q   A            
Sbjct: 185 ----QKAVSQAEAALASLKKQNKSSQLQYEGQRESLQAELRHLQGQKA------------ 228

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             +  + +   G +   +     +       L+  V   + T I   V  K +  V  G 
Sbjct: 229 --KSRVTADRDGIVFTRKV-KEGDIVSPGS-LLFTVGSREKTKIEVYVNNKDMMRVNTGD 284

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              V F       + + K +I++I P  +++  +       ++ + +  L      I + 
Sbjct: 285 EVKVIFR--VPGEDVEVKGVIDRIAP-AAEEIISSLGIPEDKIKVTVN-LKEKPAGIRVI 340

Query: 407 NGFPAEVLFTAKNTT 421
            G   +V+ T +  T
Sbjct: 341 PGATVDVVVTTQKAT 355


>gi|284050249|ref|ZP_06380459.1| ABC exporter membrane fusion protein, DevB family [Arthrospira
           platensis str. Paraca]
          Length = 470

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 54/411 (13%), Positives = 132/411 (32%), Gaps = 61/411 (14%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGI----IKKFQVENGSQILQGTPLLTFEDI-ETT 93
           P+ I V++ G +  E  V+ I S   G+    I++  V+ G  + +G  +   +      
Sbjct: 57  PVSIKVTALGRLEPEGEVISI-SAAGGMENNLIQQLLVQEGDWVQEGDAIAILDSRDRLL 115

Query: 94  DLIDLKKVSIKNLRCHIDTEKSA-----LDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             I+  +  +      ++  K+      L+        LE    +  E     + +  + 
Sbjct: 116 AAIEKAQEQVGLATAKLEQIKAGAKIGELEAARATIARLETERLTNIEAGQAMIARLEAE 175

Query: 149 CS----------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            S                    ++  +  + R+ + Y N ++ E +   L    +  ++ 
Sbjct: 176 RSTDIVATEAKIARLQAQKQGEWQVARATINRIEAEYNNAVNDERRYQELHQQGAISEEL 235

Query: 199 LTMMK---------------NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + +               NL          + + +  + +  L  ++ I E +  L  
Sbjct: 236 WNLKRLHRITTEEQLQEARFNLIRIENTYNPQIQETQAQLTQIRLAKQQQIEEAQANLDG 295

Query: 244 INELYDEANLEFANYLKEISR----DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           I+    +   E    L  I+     D+   +       + L   +       I++P  G 
Sbjct: 296 IDRGGTQQIREAMATLNRIAEVRPVDIAVAEAEVRSAQAALRQAQADLALAEIIAPRNGQ 355

Query: 300 IVYNQSFSSSNYAQQSQPL--MKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           ++   +          + +  + I+   +       A+V    I  VK G +A +     
Sbjct: 356 VLKIHAH-------PGEKIDNLGILELGETRQMVAIAEVYESDIHRVKIGQSARITSAAL 408

Query: 356 ADIREKKFKAIIEKID------PIISQQDNNLQTQEYYEVILKITDLAFSD 400
               E +   I++++        +I+   +        EV +++ + A   
Sbjct: 409 ----EGELSGIVDRVGLQIQRQDVINADPSANIDSRVVEVRVRLDETASQK 455


>gi|53713922|ref|YP_099914.1| hypothetical protein BF2630 [Bacteroides fragilis YCH46]
 gi|60682129|ref|YP_212273.1| putative ABC transporter lipoprotein [Bacteroides fragilis NCTC
           9343]
 gi|253567085|ref|ZP_04844536.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|52216787|dbj|BAD49380.1| putative membrane protein [Bacteroides fragilis YCH46]
 gi|60493563|emb|CAH08351.1| putative ABC transport system, lipoprotein [Bacteroides fragilis
           NCTC 9343]
 gi|251944209|gb|EES84718.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301163600|emb|CBW23151.1| putative ABC transport system, lipoprotein [Bacteroides fragilis
           638R]
          Length = 298

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 90/237 (37%), Gaps = 33/237 (13%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             M+S+   R D+  + +  R  +++ +++   ++NL +  A +Q  L+  E  +     
Sbjct: 81  ASMKSVESQRPDVNKQIAATRQQIATARREKRRVENLLKAGAANQKQLDDWEAQIALLER 140

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +L   +   +N    + E      ++ A                          +E    
Sbjct: 141 QLTAQMSSLQNSTNSLTEQGSSVAIQVAQ-------------------------VEDQLA 175

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ++SPI+GT++  +   +   A   +PL K V      Y+RA +T +Q+  VK G   
Sbjct: 176 KCHVVSPISGTVLA-KYAEAGELAAVGKPLFK-VADIDQMYLRAYITSEQLSQVKLGNRV 233

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSD 400
           TV F  Y     K++  ++  I          + T+E      Y V + + +     
Sbjct: 234 TV-FSDYGGDERKEYPGVVTWISDRSEFTPKTILTKEERANLVYAVKIAVKNDGLLK 289


>gi|331082977|ref|ZP_08332097.1| hypothetical protein HMPREF0992_01021 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330399972|gb|EGG79630.1| hypothetical protein HMPREF0992_01021 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 522

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 61/402 (15%), Positives = 129/402 (32%), Gaps = 49/402 (12%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF--EDIETTDLIDLKKVSI 103
           +SG +   +      SP +  I+   VE G  +  G  L+ F  +++E  +         
Sbjct: 60  ASGNVE-SEWKKTFYSPVNATIENMTVEAGDSVEAGQKLIAFNVDNLEADNQKAELTART 118

Query: 104 KNLRCHIDTEKSA-----LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             L      E++      +         LEK  E+++ +L D   +   T          
Sbjct: 119 GKLELEDAQEQANQAASKVAEAKADIPKLEKQIENKKNKLSDLRQQIAETQKNAQAQVQE 178

Query: 159 SVYRSLKMKLTRMRSIYLNRLD---------LENKSSLLRALLSS---HQKDLTMMKNLF 206
            V  + +  +    + Y   +D          + +   L+  ++     + D    ++L 
Sbjct: 179 EVESAYQAAVLAAETKYQEEMDTYNNVTKPEYDKELEALKQKINEGKGTETDKEDYRHLL 238

Query: 207 EK--NAVSQNDLNQQERIVYKS-TLELRENIHEQKNMLRHINELYDEANLEFANYLKE-- 261
           +         D+N  +  +  +   +      E +N+   +  L  E   + A    E  
Sbjct: 239 DNPPKVPELEDVNPADFQMTGTGMADTSALEAEMENVSSELAALQSELASKEALAQSETT 298

Query: 262 ----ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                +++  +      +  +K         +K I +  +G I   +  S      Q   
Sbjct: 299 GLTDAAKEKIRISNNLTELETKNLQELLEEGRKGIEAEFSGVISDTKV-SQGATVTQGME 357

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L  +        + A ++      VK+G  ATV+         KK+   IEK++ I    
Sbjct: 358 LFMLQSMDD-VCVDASISKYDFDKVKEGQKATVKLGD------KKYNGTIEKVNRIAVPN 410

Query: 378 D------------NNLQTQEYYEVILKITDLAFSDNNIELRN 407
           +            +N     +  V  K++  A    N+ +  
Sbjct: 411 EKGAPTIGVVVHIDNPDDGIFIGVEAKVSIQAAEVKNVPILP 452


>gi|295697717|ref|YP_003590955.1| efflux transporter, RND family, MFP subunit [Bacillus tusciae DSM
           2912]
 gi|295413319|gb|ADG07811.1| efflux transporter, RND family, MFP subunit [Bacillus tusciae DSM
           2912]
          Length = 420

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/376 (10%), Positives = 95/376 (25%), Gaps = 89/376 (23%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            V+  G ++ +     + S     +++  V+ G  + QG  L+          +   +  
Sbjct: 58  GVTVPGTVVADGTSQ-VASKIMASVQQVLVKEGDFVKQGQTLVVLNPEPLAAAVKQAQAG 116

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
               +  +   +S    ++                                     ++ +
Sbjct: 117 SAQAQAGVQAAQSVQAQID------------------------------------EAIRQ 140

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S         ++   + D E   SL                  +E  A S+ D +  +  
Sbjct: 141 SQASLQAAQANLQGAQSDFERTQSL------------------YEAGAASRQDYDHAQTR 182

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +  +                +    A         E    L + Q       + +  
Sbjct: 183 YQAAKAQY---------------DQAQAALQGALAQKAEAQARLGEAQAALGQAQASVQA 227

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                    + +P  G +         + A    PL+ +        +      K    +
Sbjct: 228 ASANLSDTVLKAPFDGFVTSKTVN-EGDMASPGMPLLTV--EKGPFALEVYAEEKLAAAM 284

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G T +V  P            I  +IDP              +++ +++        +
Sbjct: 285 KIGDTVSVHIPALNRSVTGTVYEITPRIDPASRT----------FKMKIRL------PGD 328

Query: 403 IELRNGFPAEVLFTAK 418
           +E+R G   E +    
Sbjct: 329 VEVRPGMFGEAVLGTG 344


>gi|224368668|ref|YP_002602830.1| multidrug efflux system, efflux pump [Desulfobacterium
           autotrophicum HRM2]
 gi|223691384|gb|ACN14667.1| multidrug efflux system, efflux pump [Desulfobacterium
           autotrophicum HRM2]
          Length = 347

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 56/368 (15%), Positives = 115/368 (31%), Gaps = 89/368 (24%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  V+ G+ + +G  L    D      +   K  ++                      
Sbjct: 57  VREILVDEGAMVEKGQLLAMLRDKRLLAQLQEAKSMVEA--------------------- 95

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                    + N         ++ +L   +    N   L  +  
Sbjct: 96  ------------------QDQVLRLLVNGTRPQEIARIEAQLEAAQVKVANGERLAKRLK 137

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           +     +S  +DL         NAV++ D+ + E  V K TL L                
Sbjct: 138 VTSETGASTIQDLD--------NAVAELDVARAEFNVVKETLALAR-------------- 175

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                      +  E    + + +     + +K+ +L++  +   + +P  G I  ++  
Sbjct: 176 ---------EGFRSE---KIAEARAVLKAQQAKVMLLQERLKDTFLYAPAPGII-ESRIM 222

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                A   + ++ +       ++RA +    +  V +G  A V    +++     FK  
Sbjct: 223 EPGELAAPGRTVLSLA-LMAPKWVRAYLAEPDLGFVAQGMEAMVHSDSFSE----AFKGK 277

Query: 367 IEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           +  I         S Q   L+TQ  YE+ + + D    DN   L  G P  V+   + +T
Sbjct: 278 VGFISSSAEFTPKSIQTTELRTQLVYEIRIWLDDP---DNRFRL--GMPVTVVLKKRGST 332

Query: 422 LAQEIIHP 429
            A   + P
Sbjct: 333 NADTRVKP 340


>gi|318605728|emb|CBY27226.1| secretion protein HlyD family protein [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 382

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 121/357 (33%), Gaps = 48/357 (13%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +   +V+   Q+ +G  L+  ++++T   I+  K  I++    I  E+SA+    N+
Sbjct: 63  GGKLISRKVQESQQVKKGDVLMVLDEVDTDIAIERLKAVIRSQEALIRQEESAIRIATNE 122

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             + E +   + E++   L    ++ +                     R+ +     L N
Sbjct: 123 TTLTEVSSWRKIEEIQATLSAARASENLA-------------------RTDFNRIAKLHN 163

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             S+ +++L + +  LT               + Q ER +  + +       +  +    
Sbjct: 164 TGSVSQSVLDNAKSSLTTT----------HAAVIQAERQLASAMIGTTPAQVKNLSEKES 213

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              +  ++       +K     L+Q         ++L  LE  R++ T+ +P +G ++  
Sbjct: 214 AQGMTLQSIANSRESIKNRQNILDQLLAQLDQSHAELRQLEVNRQRLTLTAPASGKVLKL 273

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             +          P + +   +   Y+   V    +   + G T T + P          
Sbjct: 274 L-YQPGEMIPAGAPAVLL--ETDRKYVDIYVNENMVTIYQPGTTVTAQVPALDSQ----V 326

Query: 364 KAIIEKIDP------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           + ++           +   ++        Y+V +   D        +L +G   EV 
Sbjct: 327 RGVVRFASAAPSFADLRMTRERGQADLTSYQVRIYTEDKP------QLLSGMTLEVD 377


>gi|294012686|ref|YP_003546146.1| multidrug resistance protein A [Sphingobium japonicum UT26S]
 gi|292676016|dbj|BAI97534.1| multidrug resistance protein A [Sphingobium japonicum UT26S]
          Length = 351

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 56/413 (13%), Positives = 117/413 (28%), Gaps = 92/413 (22%)

Query: 20  MTLLSIIGIIGLITW----SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           M L      + L  W    S     + +           +V  +     G +    V + 
Sbjct: 20  MLLCVAAASVALGAWVWGGSGAAQTDNA-------YVRGDVTSMAPKVGGYVVSVAVRDN 72

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  L   +D         +    K  +   + + +     N+  D+         
Sbjct: 73  QAVRPGDILFRIDD---------RDYRAKLAQAEANVKAAQARLANSGEDI--------- 114

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                   +   L  +    R   +  L L  ++S  R      
Sbjct: 115 -----------------------RLQHILVRQAAAQRGAAVADLGLARRTSDRRN----- 146

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                    L +  A+SQ  +++ E    ++   +  +        + +  L  +     
Sbjct: 147 --------ELIDGGAISQAQVDESETARSRAEAGVSVSTAAIDAQRQRVELLGTQRQAAV 198

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A   + I+                  +     E   + +PIAG +V N+           
Sbjct: 199 AALAQAIAAR---------------DLARIDLENTVVRAPIAG-VVGNRQVRVGRLVAPG 242

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ IVP +   Y+ A     Q++H++ G  A +R   Y D+     K +++ + P   
Sbjct: 243 ASLLDIVPVAD-LYVVANFKETQLEHIRPGQGARIRVDGYPDV---VIKGVVDSLAPGSG 298

Query: 376 QQ----DNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTAKNTT 421
                   +  T  +  V+ ++     +  +     L  G  A V       +
Sbjct: 299 SAFALIPTDNATGNFVRVVQRVPVKIRIQRNPLPGRLVPGLSARVEVERGARS 351


>gi|183596958|ref|ZP_02958451.1| hypothetical protein PROSTU_00187 [Providencia stuartii ATCC 25827]
 gi|188023611|gb|EDU61651.1| hypothetical protein PROSTU_00187 [Providencia stuartii ATCC 25827]
          Length = 390

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/373 (12%), Positives = 94/373 (25%), Gaps = 89/373 (23%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                V I +  +G + +   EN   +  G  L+  +                     + 
Sbjct: 57  VSGVQVPIVAQTTGNVTQVNFENTDLVKAGDVLVVLDKTN----------------ARLA 100

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E++  D                                             L   + + 
Sbjct: 101 YEQAKHD---------------------------------------------LATTVRKT 115

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           + +Y+N  + + +    R  L+  QKD      L     +S+ DL   +  V  +   L 
Sbjct: 116 KELYINGDEYQAQIQKNRISLAQAQKDYQRRAALGRSGTISKEDLQHSQEAVQLAQAALD 175

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +I +       +                 +                       T ++  
Sbjct: 176 ISIQQYNANQALLRNTELRKQPAIQQAADNVRNAWI------------------TLQRTE 217

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + SPI G +         +       LM IVP  +  ++ A     Q++ V+ G   T+ 
Sbjct: 218 VKSPITGYVSRRNV-QVGSQVGPQGSLMAIVPA-QPVWVDANFKETQLEKVRIGQPVTLT 275

Query: 352 FPHYADIR--EKKFKAI-IEKIDPIISQQDNNLQTQ-----EYYEVILKITDLAFSDNNI 403
              Y D      K   + +            N         +   V +++     +   +
Sbjct: 276 SDFYGDDIVYTGKVAGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRVELDPEQVAKYPL 335

Query: 404 ELRNGFPAEVLFT 416
            +     A +   
Sbjct: 336 RIGLSMNATIDIK 348


>gi|172039608|ref|YP_001806109.1| hypothetical protein cce_4695 [Cyanothece sp. ATCC 51142]
 gi|171701062|gb|ACB54043.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 453

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/329 (11%), Positives = 98/329 (29%), Gaps = 46/329 (13%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +     V    S  +G IK   V+ G  + QG  L+  E  +    +     ++K   
Sbjct: 57  GTLEARQRVELAPSRTNGRIKAIFVQEGDVVRQGQRLIEIEPQQQQQDLVAATGNLKVAM 116

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +   ++       + D  +   E+ +  L                             
Sbjct: 117 ADLKAAEAEYRQREAERDRAKADVENAKATLAS--------------------------- 149

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
                         + +   ++A L+  +++    K L  ++ V    L+   R +  + 
Sbjct: 150 -------------TDAEVQRVQAELTLAKQNYDRAKFLESEDVVPTQTLDDATRTLNATQ 196

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L+  I  +      +N   +         +++   +++  + +      +      T 
Sbjct: 197 AQLQSTIKTRDASREALNAQQNNLQA-AERRVEQALANVDSRRSSIVQAQGQQGATAVTL 255

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               + +PI G I         +     + +  I   +++ Y+   +  +    +++G  
Sbjct: 256 GYNFLEAPITGVIGEFNEKKIGDSVSIGERITTIT-DNQVFYLNVNIPIENRNRLRQGLP 314

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQ 376
             +             +  I  I P + Q
Sbjct: 315 VELV----NQDGSPGVQGQITYIAPQVDQ 339


>gi|327541769|gb|EGF28284.1| efflux transporter, RND family, MFP subunit [Rhodopirellula baltica
           WH47]
          Length = 519

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/313 (12%), Positives = 107/313 (34%), Gaps = 33/313 (10%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           S G I      + + +   G+I+   V  G  + +G P+     I+    +   K ++  
Sbjct: 85  SPGWIEPRPTAISVAALAPGVIESLLVVEGQPVKRGEPVARLISIDAELNVQQAKNTVAI 144

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +  +   ++  +    ++    K     E QL D   +     ++     +  +  + +
Sbjct: 145 RQGELQRAEAEWNAAMVRF----KNPVHLEVQLAD--AESMLARAETELAKLPFMIEAAQ 198

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
             +   R+    +   E   S    +++  + D          +A     L + +R    
Sbjct: 199 ANVEYARNNMQGKRSAEGAISG--RIVARAESD----------HAAESARLQELQRRQPN 246

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
              E+     + + + + +N L +E        ++E    +  ++  + +   +L   E 
Sbjct: 247 LQREVDALKTKVRALEKQLNLLVEETRQ-----VEEAKAKVASSKALWEEAKLELRQAEL 301

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQ--------QSQPLMKIVPHSKLTYIRAKVTPK 337
             E+  + +P+ G I+     S               +  ++++        +RA V  +
Sbjct: 302 ALERNVVKAPMDGRILRL-IASPGTRVSGMASSTGHSASTVVEMY-DPDRLQVRADVRLE 359

Query: 338 QIQHVKKGYTATV 350
            +  ++KG    +
Sbjct: 360 DVPMIRKGQPVEI 372


>gi|257455612|ref|ZP_05620841.1| secretion protein, HlyD family [Enhydrobacter aerosaccus SK60]
 gi|257446895|gb|EEV21909.1| secretion protein, HlyD family [Enhydrobacter aerosaccus SK60]
          Length = 370

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 108/330 (32%), Gaps = 29/330 (8%)

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           L++     ++ +I    + ++    K  V +     + + L+      +S        G+
Sbjct: 62  LQQTENSYVKGNITLLSAQINGYIEKVYVTDFEDVKQGQPLVKVSSANYSQQVVQAESGL 121

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                +L  +   +     +    + K + ++  L    + L  +++L    AVSQN+++
Sbjct: 122 EQATTNLANQQQIIEQRKADVKAAQAKVAQVKTQLELSIQQLKRLESLVGVGAVSQNEVD 181

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             +  V  +   + + I    ++ R   +  + A +     +K  +  L Q         
Sbjct: 182 TAKAAVKNNEALMSQAIASV-DVAREGQKTAEVAKIGLVAQIKSANAQLNQ--------- 231

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
                    +E   I +P +G +      +      Q   L+ ++P S   ++ A     
Sbjct: 232 -----ANTNQEYGLITAPTSGKLGQINIRT-GQLVTQGTQLVYLIPKS--MWVIANFKET 283

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEV 389
           QI  +K G  A          +   F  +++ I P        I +       T+    +
Sbjct: 284 QIDKMKIGQKAWFTVDALGKQK---FTGVVKSISPATGSEFSVIKTDNATGNFTKVVQRI 340

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            ++I          EL  G          +
Sbjct: 341 SVRIDIDGNQSRLNELMPGMSVVATVDTSS 370


>gi|209550680|ref|YP_002282597.1| secretion protein HlyD [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536436|gb|ACI56371.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 407

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 103/313 (32%), Gaps = 28/313 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  L      + +  +  E + +       S  +  F   +      L ++  ++ +
Sbjct: 93  QADMVGLTTDVSGIVEKIDVHENEAVKAGQVLFSLRADSFKIALDGAKAQLGVQRNQIMN 152

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +  +      + +  +A L  +Q      +NL    + +Q+  ++ +  +  +  ++   
Sbjct: 153 LKASYQQSLAEITQAQADLPYYQDQFDRQQNLVNNGSATQSAYDEAKHNLEAAQQKVTVA 212

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             E    L  +    D+   E   YL+                 S +   ++  +   + 
Sbjct: 213 KAEAATTLAQLGGSADQPIEENPLYLQ---------------AKSNVDNAQRELDHSVVK 257

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +    +    +Y Q SQ    +V  +   +I A     ++ +VK G TA +   
Sbjct: 258 APFDGIVTNVNALQVGSYLQASQQAFSLV-ATDHLWIAASPKETELTYVKSGQTAEIYVD 316

Query: 354 HYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            Y  +    +K  +E I P          +Q       +    + ++++          L
Sbjct: 317 TYPGV---MWKGKVESISPASGSSFSLLPAQNTTGNWVKVVQRIPMRVSIEDVQGKP-PL 372

Query: 406 RNGFPAEVLFTAK 418
           R G    V     
Sbjct: 373 RVGMSTVVDVETG 385


>gi|292492738|ref|YP_003528177.1| secretion protein HlyD [Nitrosococcus halophilus Nc4]
 gi|291581333|gb|ADE15790.1| secretion protein HlyD family protein [Nitrosococcus halophilus
           Nc4]
          Length = 326

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 95/269 (35%), Gaps = 13/269 (4%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              + +      +   + + KL R R++ +  L+  ++   ++   +  +     ++N  
Sbjct: 61  QRLAVLERDRFINRVAAARAKLERQRAV-VKELETGSRPEEIKKARAEQEAAEVALRN-A 118

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           ++    +  L   E +  ++  + RE    +     ++        L      +E   D+
Sbjct: 119 QRIYERRLTLVHTEAVSEETVDDAREV---RDRAAANLEAARQVFQLAIEGPRQE---DI 172

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           E  +       ++L + ++  +   I +P AGTI   +           +P+  +     
Sbjct: 173 EAARAEAQALEAELALAQEDLKDTEIYAPAAGTI-RVRILEPGAIVAAGEPVYTLA-LKN 230

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
             ++RA V+   +  +  G    V F       +  ++  +  I P        +QT E 
Sbjct: 231 PVWVRAYVSEPDLGRIYPGMPVEV-FT--DSRPKHPYQGQVGFISPTAEFTPKTVQTPEV 287

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLF 415
              ++    +  ++ +  L  G P  ++ 
Sbjct: 288 RTSLVYRIRVIIANPDYGLHQGMPVTLII 316



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 64/182 (35%), Gaps = 11/182 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++   +E G ++  G  L   E     + +   +  ++  R  +   ++      ++ 
Sbjct: 44  GRVEYMLMEEGDEVAPGQRLAVLERDRFINRVAAARAKLERQRAVVKELETG-----SRP 98

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           + ++KA   +E   +           ++      +V          +R      L+   +
Sbjct: 99  EEIKKARAEQEAAEVALRNAQRIYERRLTLVHTEAVSEETVDDAREVRDRAAANLEAARQ 158

Query: 185 SSLLRALLSSHQKDLTMMK----NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              L A+    Q+D+   +     L  + A++Q DL   E I   +   +R  I E   +
Sbjct: 159 VFQL-AIEGPRQEDIEAARAEAQALEAELALAQEDLKDTE-IYAPAAGTIRVRILEPGAI 216

Query: 241 LR 242
           + 
Sbjct: 217 VA 218


>gi|282877682|ref|ZP_06286497.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella buccalis ATCC 35310]
 gi|281300254|gb|EFA92608.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella buccalis ATCC 35310]
          Length = 297

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 102/289 (35%), Gaps = 39/289 (13%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V+      R  QL    G   S   +V       +    +      +SI   + D+  + 
Sbjct: 37  VVSAEQNGRLLQLGVAEGSEVSKGQQVGLIDTVQLTLKARQVGANSKSIANQKPDVNAQI 96

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           ++LR  L   +++    + L    A ++  L+     V     +L        N  R +N
Sbjct: 97  AVLRQQLKQAEQERQRFEGLVNDGAANRKQLDDATSAVRVLKRQLAAQQSSLNNSTRALN 156

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                 +++    L                            ++  + SP+ GT++  + 
Sbjct: 157 SQISANDIQKYQVL-------------------------DQLKKCHVTSPLTGTVLE-KY 190

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                +A   +PL K V  +K  ++RA +T +Q++ VK G   TV F  Y D   K++K 
Sbjct: 191 AEEGEFASIGKPLFK-VADTKNLFLRAYLTSRQLEKVKIGQQVTV-FSDYGDDTSKEYKG 248

Query: 366 IIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            +  I P           ++ +  + Y V + +       N+  ++ G 
Sbjct: 249 KVVWISPRSEFTPKTILTDDERADQVYAVKIAV------QNDGHIKIGM 291



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 58/155 (37%), Gaps = 12/155 (7%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           V + +  +G + +  V  GS++ +G  +   + ++ T       +  + +  +  +  + 
Sbjct: 36  VVVSAEQNGRLLQLGVAEGSEVSKGQQVGLIDTVQLT-------LKARQVGANSKSIANQ 88

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              +N +  VL +  +  E++   F G  +   +         +  +        R +  
Sbjct: 89  KPDVNAQIAVLRQQLKQAEQERQRFEGLVNDGAAN-----RKQLDDATSAVRVLKRQLAA 143

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +  L N +  L + +S++      + +  +K  V
Sbjct: 144 QQSSLNNSTRALNSQISANDIQKYQVLDQLKKCHV 178


>gi|197334258|ref|YP_002156932.1| periplasmic component of efflux system [Vibrio fischeri MJ11]
 gi|197315748|gb|ACH65195.1| periplasmic component of efflux system [Vibrio fischeri MJ11]
          Length = 370

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 87/234 (37%), Gaps = 30/234 (12%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           +K ++L A +++  ++L     L  K       + + + I      +L   + + K +  
Sbjct: 80  DKQAILGAQVAAQIEEL-----LVNKG----VRVTKGQPIARLDMADLDLQLSQAKAIYS 130

Query: 243 -HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             + E      L+      E++    Q+Q + A+  +++   E   E  TI +P  G + 
Sbjct: 131 VRMKEFNAAKELKRKGLQGEVA--FSQSQASLAEAKARVRNAELILENTTITAPFDGIVE 188

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
           +       ++  +  P+ K+V       I   V+ + I  + K   A V F     I   
Sbjct: 189 HLFI-EVGDFVSRGDPVAKVV-VLDPLVIDVNVSERHISQITKQQKADVSF-----INGA 241

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  +  I  I S   N       + V ++I ++       ++  G  +EV  
Sbjct: 242 SIEGYVRYISKISSSSTNT------FSVEIEIPNI-----GGKIPAGVSSEVAI 284



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 4/126 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I++  V  G ++ +G P+   +       +DL+    K +      E +A   L  K   
Sbjct: 93  IEELLVNKGVRVTKGQPIARLD----MADLDLQLSQAKAIYSVRMKEFNAAKELKRKGLQ 148

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E AF   +  L +   +  +    + N  I++ +  +   L      +++R D   K  
Sbjct: 149 GEVAFSQSQASLAEAKARVRNAELILENTTITAPFDGIVEHLFIEVGDFVSRGDPVAKVV 208

Query: 187 LLRALL 192
           +L  L+
Sbjct: 209 VLDPLV 214


>gi|37527227|ref|NP_930571.1| hypothetical protein plu3351 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786661|emb|CAE15725.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 404

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 112/319 (35%), Gaps = 50/319 (15%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           IK + V +G  + +G  +    + +  +   +   +IK     I+  +  +D +  +  +
Sbjct: 69  IKNYNVRDGDVVKKGDSIYNAINPDLEEAESILLQNIKRDNTKINAMEKYIDNVYERMKI 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                   E+   DF  K++   S++ N  I S+ +  +         Y  +++  +K  
Sbjct: 129 --------EKNYEDF--KFNKNESELKN--IDSILKDHRDDYDFFSQSYREQMNFVDKLL 176

Query: 187 LLRALLSSHQKDLTMMKNLF--EKNAVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                  S +  +     LF   +  ++ ++D+   E+  Y    E    I         
Sbjct: 177 NQNNNYLSKKDIIKYKMELFSSRRGLINLESDILDLEKRKYSLDDEQSRYI--------- 227

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-------LEKTREQKTILSPI 296
                       A   KE+  +L Q +   +  +S+L +       ++  + +   ++  
Sbjct: 228 ----------IGATKYKELDMELNQLRGELSVLVSELNVKNTGMENIKNGKLRIEGIAKA 277

Query: 297 AGTIVYNQSFSSSNYAQQ-----SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
            G + +N         +       + +  I P       +  V+ K I+ +K G +  ++
Sbjct: 278 DGKVEFNNING----IRPKQVKKGELVFTIYPDGNHFIAKGVVSEKYIRKIKIGQSVELK 333

Query: 352 FPHYADIREKKFKAIIEKI 370
              Y  ++    K  +E I
Sbjct: 334 MDAYDYLKYGAIKGKVEAI 352


>gi|94314511|ref|YP_587720.1| HlyD family multidrug resistance protein [Cupriavidus metallidurans
           CH34]
 gi|93358363|gb|ABF12451.1| multidrug resistance protein (hlyD family), emrA-like secretion
           [Cupriavidus metallidurans CH34]
          Length = 381

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 79/292 (27%), Gaps = 28/292 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           ++L+    + +          ++S    +      +            +    RA     
Sbjct: 95  QELVRLDNRQYQAAYDESQATVASRQADVTRAEADLAQQQARIAQAAAEVDGARANSRYA 154

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              +     L +  A ++    +      +++  L  N    +        L        
Sbjct: 155 ASQVERYAPLVKSGAETEERTAELRNAQTRASTTLAANEAALRVEQSQTVTLKAR----- 209

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                     LEQ         +     +   +   + S  AG +          +AQ  
Sbjct: 210 ----------LEQAHAQLDVAQASARQAKLNLDDTVVRSTTAGRVADKGVR-VGQFAQPG 258

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--- 372
             L+ +VP     Y+ A     Q+  ++ G   T+          ++   +++ + P   
Sbjct: 259 MRLLTVVPVQD-LYLTANFKETQVGRMRPGQPVTLHVDALP---GEELHGVVDSLSPGTG 314

Query: 373 -----IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                + +Q      T+    V ++I     ++    L  G    V    + 
Sbjct: 315 SQFALLPAQNATGNFTKIVQRVPVRIHVDVPTEARAILVPGLSVVVDIDTRE 366


>gi|22299286|ref|NP_682533.1| hypothetical protein tlr1743 [Thermosynechococcus elongatus BP-1]
 gi|22295469|dbj|BAC09295.1| tlr1743 [Thermosynechococcus elongatus BP-1]
          Length = 428

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 57/424 (13%), Positives = 130/424 (30%), Gaps = 111/424 (26%)

Query: 20  MTLLSIIGIIGLITW-SILLPIE---------------ISVSSSGEILNEDNVVEIKSPF 63
           +    ++G +GL  W S   P++                 ++++G+++     V I    
Sbjct: 22  VIAAGLVGGVGLFLWRSRQTPLDLDRYTVPVQDSRDFIARIAATGKVVP-GQSVNISPKR 80

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           +G++ +  VE G ++  G  +                                       
Sbjct: 81  AGLLAELYVEQGDRVKAGQII--------------------------------------- 101

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                   +SR+EQ      + +   +      I          +   R+  + + + + 
Sbjct: 102 -----ARMDSRDEQAQLAQAQANLADAIARRDRI----------VAGNRAEEIAQAEAQV 146

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +++  RA L+  ++ L   + L  +  + ++ L + +                + + + +
Sbjct: 147 RAATSRAQLA--EERLKRNEWLAAEGVIPRDTLAELK--------------ANRDSAIAN 190

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +NE      L       E   D+ Q     A   +++       E   I +P  G I   
Sbjct: 191 LNEAQKRLQLLQRGSRSE---DIRQADAMVAAAQAQVQAARAALEDTVIRAPFTGIITQK 247

Query: 304 QSFSSSNYAQQSQPLMK--------IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +     +   +             IV  +K   I A+V    I  V  G    +R   Y
Sbjct: 248 YAN-PGAFVTPTTTASATTSATSTSIVAIAKGLEILAEVPEVDIGQVLVGQPVEIRADAY 306

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                  F+  +  + P    + N      +++V +     +      +LR+G    + F
Sbjct: 307 PGET---FQGRVRLVAPEAVVEQN----VTFFQVRV-----SLQTGREKLRSGMNVNLDF 354

Query: 416 TAKN 419
             + 
Sbjct: 355 LGQK 358


>gi|198276638|ref|ZP_03209169.1| hypothetical protein BACPLE_02834 [Bacteroides plebeius DSM 17135]
 gi|198270163|gb|EDY94433.1| hypothetical protein BACPLE_02834 [Bacteroides plebeius DSM 17135]
          Length = 354

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 88/285 (30%), Gaps = 31/285 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL    + +    K     +  V  S ++  + + +   N    +   +  +A L   ++
Sbjct: 85  LLILDNREYQIKVKEAEAALLDVKGSKEVLHSGIETSQTNIAVQDANIAEAKAKLWQLEQ 144

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D      L ++ +V +    Q +     +    +  + ++K       E           
Sbjct: 145 DYRRFARLLKEESVPEQQYEQAKASYEAAQARYQALLEQRKAAQSQFTETTRRTTS---- 200

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                       +     + + L +         + +P  G +   ++     Y Q  Q 
Sbjct: 201 -----------AEAAILSKEASLDLARLNLSYTVLTAPYDGYM-GRRTLEPGQYVQAGQT 248

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID------ 371
           +  +V  +   ++ A     QI H+  G    ++         K F   +  I       
Sbjct: 249 ISYLV-RNTDKWVTANYKETQIIHIYIGQEVRIKVDALP---GKVFHGTVTAISEATGSK 304

Query: 372 ----PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
               P  +   N ++ Q+   V + + D+   + N  LR G   E
Sbjct: 305 YSLVPTDNSAGNFVKVQQRIPVRIDLKDITPEEMN-NLRAGMMVE 348


>gi|117920668|ref|YP_869860.1| secretion protein HlyD family protein [Shewanella sp. ANA-3]
 gi|117613000|gb|ABK48454.1| secretion protein HlyD family protein [Shewanella sp. ANA-3]
          Length = 351

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 102/295 (34%), Gaps = 33/295 (11%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E++  +    L +      KV     S+    +K  L  +++ Y  +   + + +L    
Sbjct: 72  ENQRVEKGKVLFRLDDAMFKVMVDKASAKLAQVKTDLAVLKASYHEK---QAEITLAETK 128

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+  +K+    +NL  K+ VS++ L    +    +    R+NI   +  L  I E    +
Sbjct: 129 LAFAEKEQKRQENLIGKHFVSESQLEDARQNTDIA----RQNIQTLQKDLHRIAESLGGS 184

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                           +   ++ + +++L   +    +  I +P++G +          Y
Sbjct: 185 PDFPI-----------EQHPSYLEALAQLNEAKLDLSRVEIKAPVSGVVSQLP--KLGQY 231

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                  + +V      +I A  T   + HVK G    +    + D     ++  +E + 
Sbjct: 232 VNVGAIALALV-ADHALWIEANFTETDLTHVKPGQKVNIHIDTFPDNH---WQGTVESLS 287

Query: 372 PII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           P          +Q       +    V ++I  +  +     LR G  A V    +
Sbjct: 288 PATGAEFSLIPAQNATGNWVKIAQRVPVRIA-IDTALPEAPLRAGLSAVVDIDTE 341



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 71/195 (36%), Gaps = 13/195 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + + V + +  +G +    V    ++ +G  L   +D     ++D     +  ++  + 
Sbjct: 50  VKADKVPVSAQVAGNVDSLYVVENQRVEKGKVLFRLDDAMFKVMVDKASAKLAQVKTDLA 109

Query: 112 TEKSALDFLNNKYDVLEKAF---ESREEQLLDFLGKYHSTCSKVFNYGI-----SSVYRS 163
             K++      +  + E      E  +++  + +GK+  + S++ +            ++
Sbjct: 110 VLKASYHEKQAEITLAETKLAFAEKEQKRQENLIGKHFVSESQLEDARQNTDIARQNIQT 169

Query: 164 LKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQ 218
           L+  L R+        D  +E   S L AL   ++  L + +   +      VSQ     
Sbjct: 170 LQKDLHRIAESLGGSPDFPIEQHPSYLEALAQLNEAKLDLSRVEIKAPVSGVVSQLPKLG 229

Query: 219 QERIVYKSTLELREN 233
           Q   V    L L  +
Sbjct: 230 QYVNVGAIALALVAD 244


>gi|302871690|ref|YP_003840326.1| secretion protein HlyD family protein [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574549|gb|ADL42340.1| secretion protein HlyD family protein [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 374

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 115/360 (31%), Gaps = 51/360 (14%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I K  VE GS++ +G  +   +        ++ + +++  +   D  +   +    KY
Sbjct: 57  GRIVKVFVEEGSKVKKGDIIAKIDSSLYEVQKNIAQANLEVAKLSADIAEQNWELAKLKY 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +L K                                   K    ++  I  N L L++ 
Sbjct: 117 QLLSK-----------------------------------KPSKYKINQIKENILQLKDI 141

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  +   ++++  ++ +   +  +   L++ +  +     +     H+  ++   +
Sbjct: 142 KLGNENNIEFLEENIKNLEKMKMADLDTIKLLSELKMQLNSLKAQNSSLTHQINSLENQL 201

Query: 245 NELYDEANLEFANYLKEISRDLE-----QNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
             + +E+  +    + EIS D+      Q           L I +   E+ TI SP+ G 
Sbjct: 202 EMVKNESVTDEDKMIAEISVDIAKRNYLQALSYVKVAEQNLKISDLNLEKTTITSPVDGI 261

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP----HY 355
           ++         +      + +I        I   V   Q+Q +  G    +        Y
Sbjct: 262 VLTKGVD-QGQFVGIGTFIAQIGLSDYYLKI--YVPSAQLQKLSLGKKVELILDNNKKAY 318

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +I     K          + +    + +  + V LKI  L    +   LR G   +V  
Sbjct: 319 GEIVFISDKGEFTP----RNVETKEEKQKVVFMVKLKIIKLKIIKDKEILRPGMLVDVKI 374


>gi|87310188|ref|ZP_01092320.1| hypothetical protein DSM3645_13990 [Blastopirellula marina DSM
           3645]
 gi|87287178|gb|EAQ79080.1| hypothetical protein DSM3645_13990 [Blastopirellula marina DSM
           3645]
          Length = 594

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 97/312 (31%), Gaps = 25/312 (8%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +    +++     + E+QL      Y    +       +     L ++     +    
Sbjct: 106 KRVTQGEEIIRIDTSAIEDQLNAQKIVYEKALATKIETQEAFEAAKLAVQEYAEGTFLQT 165

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              +E    + +  L++ Q  L   K +  K  V+          V ++ L+L      +
Sbjct: 166 LQQMEATIKIAQQNLTTAQDMLGYSKRMSRKGYVTALQREADVYAVERAKLDLEVAETSK 225

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           + +    +    +   E           +   +  F  E ++L  LEK      I +P  
Sbjct: 226 RVL---TDFTKQKTIRELEAARDSAEARMRSEEAAFQLEKARLDRLEKQLVNCVITAPQN 282

Query: 298 GTIVYNQS----------FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           G +VY              +     ++ Q +++I P      ++  +   +I  ++ G  
Sbjct: 283 GMVVYANETDRRGSTETGIAEGTIVREGQTIVRI-PDLAKMQVKVTIHESKIDRIRTGMP 341

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           A +       I+++ F+  +  I              + Y  I+ I           LR 
Sbjct: 342 ARI------VIQDRTFQGKVTGIANQPEPTGWFSANVKEYGTIVSID-----GTQEALRP 390

Query: 408 GFPAEVLFTAKN 419
           G  A V     +
Sbjct: 391 GLTAFVEIQVAD 402


>gi|320106940|ref|YP_004182530.1| secretion protein HlyD family protein [Terriglobus saanensis
           SP1PR4]
 gi|319925461|gb|ADV82536.1| secretion protein HlyD family protein [Terriglobus saanensis
           SP1PR4]
          Length = 381

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/362 (11%), Positives = 102/362 (28%), Gaps = 55/362 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +KK  VE+   ++ G  L+  +D +    +   + ++   +  +   ++     + K
Sbjct: 56  SGTVKKVDVEDYEAVVPGQTLVELDDADYRATLAQTEAALAGSQAALANNQATKQIQDAK 115

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               E   +     +        S    V    +                          
Sbjct: 116 VQNAEAMVQQAAAAMAAAQAGVDSVQPDVTRSDL-------------------------- 149

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                         + T  + L +  A +            + +  L     + +     
Sbjct: 150 --------------ERTRQQALLDARATTHQQYELAIADATRFSGLLASRQADLQRAQAA 195

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++        E    +  ++      Q     + + + + +       I +P  G +V  
Sbjct: 196 LSSSRTLVEAEKRQRVA-LNTQDALYQADIRAKQAGIVVAQVNLGYTHIAAP-TGGVVGE 253

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +             ++ +V      +I+A     Q+ ++++G  A +R   + D      
Sbjct: 254 RHVQVGQLVAPGMQVIDLV--QGGVWIQANFKETQLTNMRRGDDADIRVDTFPDA---VL 308

Query: 364 KAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVLF 415
              + +I P    Q      +  T  + +V+ +I      D        LR GF   V  
Sbjct: 309 HGKVVEIAPASGSQFALLPPDNATGNFTKVVQRIPVKIKLDPGHTLPAGLRPGFSVIVTV 368

Query: 416 TA 417
             
Sbjct: 369 HT 370


>gi|89896366|ref|YP_519853.1| hypothetical protein DSY3620 [Desulfitobacterium hafniense Y51]
 gi|89335814|dbj|BAE85409.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 311

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 83/244 (34%), Gaps = 17/244 (6%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
             L+ EN        L++ +         ++  AVS+ +L+Q E     +     +    
Sbjct: 4   ELLNAENSLKSAENDLTTKKNTYENNVESYKFGAVSKQELDQSEAGYKLAQNTYNKAAAS 63

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +       +    A   + + L + + D          +   L  LEK     TI +PI
Sbjct: 64  LEAAKIKAAQDVKTAEANYNSALADYNND---------SQKIALDKLEKNLADATIKAPI 114

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G +     ++ +        L+ +V  ++   I   V       VK G    ++     
Sbjct: 115 SGVVT--AVYAEAG--SPGNGLLFVVEDAEKLTITTYVKEYDADKVKPGQMVNIKTDA-- 168

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              ++ F   + +I P  ++  N         V  + T++   + + +L+ G  A +   
Sbjct: 169 -TEDELFAGQVVRISPASTKTANGTTDTSNTTVEFE-TEVDILEPDDQLKIGMNARLNII 226

Query: 417 AKNT 420
            +  
Sbjct: 227 IEKK 230


>gi|296184901|ref|ZP_06853312.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
 gi|296050683|gb|EFG90106.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
          Length = 371

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 64/411 (15%), Positives = 140/411 (34%), Gaps = 69/411 (16%)

Query: 18  KRMTLLSIIGIIGLITWSILLPI----EISV---SSSGEILNEDNVVEIKSPFSGIIKKF 70
           KR+  L+I+ I+ ++++S+   +    +        SG    E + + + S  SG I   
Sbjct: 4   KRILKLAILFIVLILSFSVFFTVKSLKDKQSDEFIYSGT--AEADTINVTSETSGKIGDI 61

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +++ GS++  G  +      ET   +   ++SIKN    ++  K                
Sbjct: 62  KIKEGSKVKSGDLVAIISSDETEVNLQNSEISIKNAENELEKIKDG-------------- 107

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             +R E+                   I +    ++     ++    N  + +N     + 
Sbjct: 108 --NRIEE-------------------IKAQQALVEQAQAAVKQGDANVNNAKNNLDAAKT 146

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN--ELY 248
                +K       L+   + S+  ++  +  +   +  L             +N  +  
Sbjct: 147 NYDYKKKLYDDAVTLYNSGSESKYKVDAAKNELDNISNTLNNAKSTMDMSQAQLNNYKAQ 206

Query: 249 DEANLEFANYLKE--ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             A  E  N L      RD    Q       +   + +   ++  ++S + GT+     F
Sbjct: 207 LSAASEKLNLLVNGATERDKNTAQYNLDKAQNSYELSKIQLDKNNLVSAVDGTVQTIN-F 265

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKV-TPKQI-QHVKKGYTATVRFPHYADIREKKFK 364
               Y      +  ++       +  K+  P+ I  ++K     T++      I+ K  K
Sbjct: 266 KKGEYVTPGTAVATLI---DTKNVWVKIYVPESILPNIKLDKNVTLKS---DFIKNKTIK 319

Query: 365 AIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIEL-RNGF 409
             I  I P       N+ T++      Y V ++I D      N+++ ++G 
Sbjct: 320 GKITYISPDAEFTPMNIVTKKDRMKIVYAVKIQILD------NLDIVKSGM 364


>gi|114047370|ref|YP_737920.1| secretion protein HlyD family protein [Shewanella sp. MR-7]
 gi|113888812|gb|ABI42863.1| secretion protein HlyD family protein [Shewanella sp. MR-7]
          Length = 351

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 101/295 (34%), Gaps = 33/295 (11%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E++  +    L +      KV     S+    +K  L  +++ Y  +   + + +L    
Sbjct: 72  ENQRVEKGQVLFRLDDAMFKVMVDKASAKLAQVKTDLAVLKASYHEK---QAEITLAETK 128

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+  +K+    +NL  K+ VS++ L    +    +    R+NI   +  L  I E    +
Sbjct: 129 LAFAEKEQKRQENLIGKHFVSESQLEDARQNTDIA----RQNIQTLQKDLHRIAESLGGS 184

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                           +   ++ + +++L   +    +  I +P++G +          Y
Sbjct: 185 PDFPI-----------EQHPSYLEALAQLNEAKLDLSRVEIKAPVSGVVSQLP--KLGQY 231

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                  + +V      +I A  T   + HVK G    +    + D R   ++  +E + 
Sbjct: 232 VNVGAIALALV-ADHALWIEANFTETDLTHVKPGQKVNIHIDTFPDNR---WQGTVESLS 287

Query: 372 PII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           P          +Q       +    V ++I           LR G  A V    +
Sbjct: 288 PATGAEFSLIPAQNATGNWVKIAQRVPVRIAIDTVLPE-APLRAGLSAVVDIDTE 341



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 71/195 (36%), Gaps = 13/195 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + + V + +  +G +    V    ++ +G  L   +D     ++D     +  ++  + 
Sbjct: 50  VKADKVPVSAQVAGNVDNLYVVENQRVEKGQVLFRLDDAMFKVMVDKASAKLAQVKTDLA 109

Query: 112 TEKSALDFLNNKYDVLEKAF---ESREEQLLDFLGKYHSTCSKVFNYGI-----SSVYRS 163
             K++      +  + E      E  +++  + +GK+  + S++ +            ++
Sbjct: 110 VLKASYHEKQAEITLAETKLAFAEKEQKRQENLIGKHFVSESQLEDARQNTDIARQNIQT 169

Query: 164 LKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQ 218
           L+  L R+        D  +E   S L AL   ++  L + +   +      VSQ     
Sbjct: 170 LQKDLHRIAESLGGSPDFPIEQHPSYLEALAQLNEAKLDLSRVEIKAPVSGVVSQLPKLG 229

Query: 219 QERIVYKSTLELREN 233
           Q   V    L L  +
Sbjct: 230 QYVNVGAIALALVAD 244


>gi|308071118|ref|YP_003872723.1| membrane-fusion protein [Paenibacillus polymyxa E681]
 gi|305860397|gb|ADM72185.1| Membrane-fusion protein [Paenibacillus polymyxa E681]
          Length = 469

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/365 (12%), Positives = 107/365 (29%), Gaps = 30/365 (8%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    +  G+ + +G  + + +D +    +     SI   +  ID  ++ L    + 
Sbjct: 72  GGTVASAYLTVGTAVQKGAVIASLDDADYKLQVAQATASILEAQAGIDNAQANLQAATSV 131

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLE 182
               +         +           +KV     +   +  +  + + +S Y+  + D E
Sbjct: 132 IQSADAGITGARANV-----------NKVNKGARAQEKQQAQATVDKAQSAYIKAKTDSE 180

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
               L  A  ++   +     N       +   L   ER     +L L     E     +
Sbjct: 181 RTQKLFEAGAATASDNENARLN-------ATAALKDLERAKDSLSLLLEGATAEDHQSAQ 233

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              +       +     ++     +Q    +   +      E    +  + SP+ G I+ 
Sbjct: 234 ASFQDALAGKTKALAATEQAEASKKQASANYQKALVAKGQAELALSRTRLTSPVNGVILD 293

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +  +     Q + +I        +   V   +I+  KKG    V    Y + R+  
Sbjct: 294 KIVNT-GDLVASGQAVYRIG-SIDRLKVLLPVPDSEIKDWKKGQQVKVVL--YEETRQGT 349

Query: 363 FKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
              +             +   N   +++    +       +DNN  L     AE +    
Sbjct: 350 VSNVYPSTSTDTGRVNVEIVINNPQRDWLPGQVIKAAQQVTDNNGILVP---AEAVINTG 406

Query: 419 NTTLA 423
           +    
Sbjct: 407 SKPFI 411


>gi|302343926|ref|YP_003808455.1| membrane-fusion protein [Desulfarculus baarsii DSM 2075]
 gi|301640539|gb|ADK85861.1| membrane-fusion protein [Desulfarculus baarsii DSM 2075]
          Length = 416

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/371 (12%), Positives = 110/371 (29%), Gaps = 58/371 (15%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L+   P     +  L ++ ++  I WS+L  I   V   G ++    V+++ S   G + 
Sbjct: 24  LQVTRPGGWIALGALCLV-LLAAIVWSVLGRIPTKVDGVGMLIRPGGVLDVVSLGQGQVS 82

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             +V +G  + QG  +           +  + VS +     +  ++  L     K D L+
Sbjct: 83  AIKVGSGDMVAQGQVVAEL----FQPSLQAQIVSARQELGQLTKQRQTLGAFYEKQDKLQ 138

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                                      + +   R +L      +
Sbjct: 139 ------------------------------------------QQLLTEQRKNLRAAMDDI 156

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L+  +K +   + L ++  ++   L   +  V  +  + R+++ + K++     +  
Sbjct: 157 DVRLNWLEKRVGDQQKLLDQGLITSQTLMDTKSQVMSAKEQKRQHMVDLKDLEEGYLKFQ 216

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D+   + A            +            +      +  ++S  AG ++  ++   
Sbjct: 217 DQQERDLAQ----------SDLSVLQSRGRLELLESDLSLRSRVISQYAGRVLELKAR-V 265

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                   PL  +    K     A     Q + +KKG T                   + 
Sbjct: 266 GAEVDVGTPLFSVERLDKDLVTVAYAPAAQGKRIKKGMTIETTPSTVKRDEYGYMIGRVT 325

Query: 369 KIDPIISQQDN 379
            + P  +    
Sbjct: 326 DVSPFPATDQG 336


>gi|251773411|gb|EES53960.1| secretion protein HlyD [Leptospirillum ferrodiazotrophum]
          Length = 327

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 75/242 (30%), Gaps = 43/242 (17%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            DL  K  + R +  +    L   K L   + +S+ DL   E    K    L E      
Sbjct: 120 RDLARKVQVAREVTDARDHYLRG-KKLLSSHFISEQDLEDLETTYQKKKEALEE------ 172

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                             N + E  R+L             L   E     +T+ +P  G
Sbjct: 173 -----------------INRMVEADREL-------------LATSEVHPRNRTVFAPRNG 202

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIV-PHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            I+  +  +  +  + SQPL+ +V P S +  ++ A +   Q+  V  G    +    Y 
Sbjct: 203 QIIQ-RLATLGDVVRPSQPLVSLVDPRSREDLWVDAYLRETQVWKVHPGQKVHIHIDAYP 261

Query: 357 DIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEV 413
                      I       S+         + +V+ ++      D      L  G  AEV
Sbjct: 262 GAVFTGHVLEFIPAASQAFSRLPIQNAAGTFVKVVQRVPVRIVFDSLQGKPLYPGMSAEV 321

Query: 414 LF 415
             
Sbjct: 322 AI 323



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 69/207 (33%), Gaps = 18/207 (8%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL------NEDNVVEIKSPFSGII 67
           P+      L+ ++G+   + W + L ++      G  +       +  +  + SP  G +
Sbjct: 21  PSWRSPRILIPLLGLAATLVWGLFLLVD-----RGRYVRSVDCYVQGKITLVASPVGGRL 75

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V  G  +  G  + T +          +     NL  +I   ++    L  K  V 
Sbjct: 76  IALTVNEGDPVSLGEVIATIDTT------GDRYNRHHNLSGNISPYRTLARDLARKVQVA 129

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSS 186
            +  ++R+  L           S+     + + Y+  K  L  + R +  +R  L     
Sbjct: 130 REVTDARDHYLRGKKLLSSHFISEQDLEDLETTYQKKKEALEEINRMVEADRELLATSEV 189

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQ 213
             R       ++  +++ L     V +
Sbjct: 190 HPRNRTVFAPRNGQIIQRLATLGDVVR 216


>gi|126641845|ref|YP_001084829.1| RND efflux transporter [Acinetobacter baumannii ATCC 17978]
 gi|126387729|gb|ABO12227.1| Putative RND family drug transporter [Acinetobacter baumannii ATCC
           17978]
          Length = 294

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 108/355 (30%), Gaps = 80/355 (22%)

Query: 21  TLLSIIGIIGLITWS---ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            +++ I ++  I W    I LP  +  +    +  E +   I    SG I++  +++   
Sbjct: 1   MVIAFIIVLVSILWILKVIFLPSSVVKTDDARVDVEYS--TIAPKVSGNIEEIYIKDHQT 58

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L                         ID                       +  
Sbjct: 59  VKKGQLL-----------------------ARIDAR-------------------DYQAA 76

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L +    Y    + +    ++   +   ++            + E +   + A +   + 
Sbjct: 77  LAEAESNYAKAQADLNEAMLAVERQPTVIR------------ETEAQLRKVEAGIKLTKD 124

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +    + L    A S+    Q +  + +   +L  +  +  +    +N+   +   + A 
Sbjct: 125 NTARYEQLQALGAESRLITQQSKTTLTEQYADLDSSKEKVIDAQYQLNQYKIQVQAKQAA 184

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
             +  +                    +       I +PI G I   +S +  N+     P
Sbjct: 185 LKQAQAAL---------------DKAKLNLSYTEIRAPIDGMI-GQKSANVGNFVGAGNP 228

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           LM +VP     Y+ A     +++ +K G   TV    Y      + K +++   P
Sbjct: 229 LMVVVPLD-QVYVEANFREIELKQIKIGQPVTVYVDAYN----VELKGVVDSFSP 278


>gi|330959430|gb|EGH59690.1| secretion protein HlyD [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 387

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/388 (12%), Positives = 114/388 (29%), Gaps = 87/388 (22%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PIE + ++      +     I    SG + +  V++   +  G  L+  +D        
Sbjct: 66  SPIESTENAQ----VKGQTTLIGPQLSGYVYEVPVQDFQFVKAGDLLVRLDD-------R 114

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + +  +      +  +K++L     +    E     R+ +L + + +   + +       
Sbjct: 115 IYRQRLDQAEAQLAVQKASLANNLQQRRSAEATIGQRQAELQNSMAQSRKSAA------- 167

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                                                   DL   K L    +VS+++L+
Sbjct: 168 ----------------------------------------DLRRNKALVTDGSVSKSELD 187

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             E    ++   + +                    L     L+ +  +    + + A+  
Sbjct: 188 VTEAADAQANAAVAQAKAVL---------------LIAREDLQTVIVNRGSLEASVANAQ 232

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + + +     +   I++P  G +          Y      LM +VP  +     A +   
Sbjct: 233 AAVELARIDLDNTRIVAPRDGQLGQIGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKET 289

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKI 393
           Q+ +V+ G   +       D    +    I++I P    +      +  T  + ++  +I
Sbjct: 290 QMANVRLGQPVSFTVDALDDR---EMHGHIQRISPAAGSEFSLLPADNATGNFVKISQRI 346

Query: 394 TDLAFSDNNIE----LRNGFPAEVLFTA 417
                 D +      LR G    V    
Sbjct: 347 PVRIVVDADQPMLDHLRPGMSVVVSIDT 374


>gi|38505867|ref|NP_942485.1| hypothetical protein slr6042 [Synechocystis sp. PCC 6803]
 gi|38423891|dbj|BAD02099.1| slr6042 [Synechocystis sp. PCC 6803]
          Length = 545

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/389 (12%), Positives = 119/389 (30%), Gaps = 78/389 (20%)

Query: 40  IEISVSSSGEILN-EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           ++  + ++G+I       VE+ +P  G + +  V  G  +  G P+ T     T+  +  
Sbjct: 70  LDTGIRTTGQIETLPQQRVEVTTPVGGKLLELLVNPGESVTAGQPVATM----TSAELAE 125

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            + + ++ R                   +E+A    E    ++  +     S++    ++
Sbjct: 126 LRTTAQDRRSSAIA-------------AVEEAQADLELARENYRQQQQVAQSEIEEARLA 172

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
             +                                  Q+     + L    A+ +    +
Sbjct: 173 KEFA---------------------------------QERYDRDRELEANGALPRRQFLE 199

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E  + ++   L                   +A L  A    ++S +       +   + 
Sbjct: 200 SEVALAQAQANLVRTQSRLPVSEAQAQIKRAQAALSVAQKQVKLSEE------NYQTRLQ 253

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQS-----FSSSNYAQ-QSQPLMKIVPHSKLTYIRA 332
           +L    +      I +PI G +V   +            Q   +P+  ++ +S+   + A
Sbjct: 254 QLGTDARPDGTIVIKAPIDGIVVDPATTPEHEIKVGESRQDAGEPIFTLI-NSQQVQVSA 312

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            +  K +  +++G           D   K F+  I +I  ++  ++            + 
Sbjct: 313 NIYEKDLNKIRRGQGIRGWVSSSPD---KTFRGRINQIGSVVEGEN-----------RIV 358

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                  + + +L+ G   E+      T+
Sbjct: 359 AVKATLDNPDGQLKPGLFVELEVLTDRTS 387


>gi|293395375|ref|ZP_06639659.1| multidrug resistance efflux pump [Serratia odorifera DSM 4582]
 gi|291422059|gb|EFE95304.1| multidrug resistance efflux pump [Serratia odorifera DSM 4582]
          Length = 372

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 113/362 (31%), Gaps = 69/362 (19%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V++   +  G  L   +  +    ++L + ++       D +++ +  L  + 
Sbjct: 70  GYLVAVAVQDNQPVKAGQLLARIDPRDFQAKVELAEAAVAAAVAENDVKQARIANLAARQ 129

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                           IS +  +               L+   +
Sbjct: 130 -----------------------------QQQISLIAEAQAAVRAAAAESNRAALEDRRQ 160

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             L R  +SS Q+                         V  S  + R+ + +       +
Sbjct: 161 HRLARQNISSAQQ-------------------------VESSDADARKTVAQLAQAQARL 195

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                +A    A+  +    + ++ +       + LTI         I+SPI GT+    
Sbjct: 196 ASQ-QQALSVLASSQQATEAERDKAKAMLTQAQAILTIARINLASTRIVSPINGTV-GEH 253

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +  +  YA+   PL+ +VP +   Y+ A     QI H++    A V+   +     + FK
Sbjct: 254 ALRAGQYAETGSPLLSVVPGNT--YVVANFKETQIDHMQVDQPAEVQVDAFG---GQVFK 308

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFT 416
             +E   P    Q      +  T  + +++    ++I   A      ++R G    V   
Sbjct: 309 GKVESFSPASGAQFALLPPDNATGNFTKIVQRMPVRIRLDAGQTRVEQVRPGMSVMVTVD 368

Query: 417 AK 418
            +
Sbjct: 369 TR 370


>gi|322376083|ref|ZP_08050593.1| competence factor transport protein ComB [Streptococcus sp. C300]
 gi|321279033|gb|EFX56076.1| competence factor transport protein ComB [Streptococcus sp. C300]
          Length = 449

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 58/444 (13%), Positives = 138/444 (31%), Gaps = 40/444 (9%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R +     R+ L   +  + L+ +++    EIS+S+   +     +  I+S  +  I   
Sbjct: 14  RRYHNFSSRVILPMSLLFMFLLGFAVFAEKEISLSTRATVEPSRIIANIQSTSNQRIVAN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            +E    + QG  L+ ++       ++     ++ L+      K  L +L +        
Sbjct: 74  YLEENKLVKQGDLLVQYQQGAEAVQVEAYASQLEMLKDQ----KKQLGYLQSSLKEGSDQ 129

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           F   ++     + + + + +      +S    S+  +            +L +++     
Sbjct: 130 FPEADKFGYQEMFRDYLSQASSLRSNVSQQNASISSQNAAASQSQAEIGNLISQTEDKIR 189

Query: 191 LLSSHQKDLTMMKNL----------------------FEKNAVSQNDLNQQERIVYKSTL 228
              + +  +     L                       +   ++Q D   Q   +  S  
Sbjct: 190 DYKTAKSAIEKGDQLDSQNPAYSFYQTYKNQGEEDPQAKSQVIAQVD--AQIAQLESSLA 247

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             R           H   L  +     + +L ++ ++L    +   +  S   +     +
Sbjct: 248 TYRVQYAGSGAQQAHATGLDSQLESLKSQHLVKVGQELTLLDQKILEAESGKKVQGGLLD 307

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKG 345
           +  I +   G +  N   S S    +   L ++ P       T + A ++ K +  VK G
Sbjct: 308 KGKITASEDGVLHLNPETSDSTMVAEGTLLAQLYPSLEKEGKTKLTAYLSSKDVARVKIG 367

Query: 346 YTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
            +  VR+    D + +    + I  ID   ++ +     +   E  L     A     +E
Sbjct: 368 DS--VRYTTTNDAKNQIFLDSTITSIDATATKTEQGNFFKIEAETHLTSEQAATLRYGLE 425

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIH 428
            R              +  +    
Sbjct: 426 GRLQM------ITGKKSYLRYFWD 443


>gi|238650395|ref|YP_002916247.1| multidrug resistance protein A [Rickettsia peacockii str. Rustic]
 gi|238624493|gb|ACR47199.1| multidrug resistance protein A [Rickettsia peacockii str. Rustic]
          Length = 350

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 86/261 (32%), Gaps = 11/261 (4%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L      + +   N   +E K S+ ++ L    + L + K  F+  A     + +  +  
Sbjct: 94  LAALEASIEACIKNIEIIEQKISIGQSSLEQAAEKLKLNKISFDIVATDFMRVQELNKAR 153

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           + S+  L ++ +  +       +   + ++    +L+ +  +    Q    +      + 
Sbjct: 154 FASSKTLDDSKNAYQKAKTDYKQAQLDLDIS-KQHLQLLDLEKAAEQEKLKELTENKKVT 212

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            ++ +   +++ + G I  N S    NY    + L  IV      YI+A     QIQ  K
Sbjct: 213 LRSLQNTKLIAMVPG-IFGNSSLEVGNYIVPGRALFSIV-QDNTMYIQANFKETQIQKFK 270

Query: 344 KGYTATVRFPHYA-DIREKKF----KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
            G    + F      +   K      A   K   I         T+    V + I    F
Sbjct: 271 SGMKVKIEFDALPKKVIYGKIRNIAPATGSKFSLIPPDHATGNFTKSVQRVPVLID---F 327

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
              N  L  G  A V      
Sbjct: 328 ESPNANLVPGMSAIVSIRTDQ 348



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 23/193 (11%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
            W+     + +         + ++  + +  SG++ K  V + +++ +G  +   +D + 
Sbjct: 38  VWANTQSTDNAYI-------DADISNVSAEVSGVLTKLFVTDNTKVNKGDLIGEIDDRDY 90

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL------LDFLGKYH 146
                     +  L   I+     ++ +  K  + + + E   E+L       D +    
Sbjct: 91  KA-------KLAALEASIEACIKNIEIIEQKISIGQSSLEQAAEKLKLNKISFDIVATDF 143

Query: 147 STCSKVFNYGISS---VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               ++     +S   +  S              +LDL+     L+ L      +   +K
Sbjct: 144 MRVQELNKARFASSKTLDDSKNAYQKAKTDYKQAQLDLDISKQHLQLLDLEKAAEQEKLK 203

Query: 204 NLFEKNAVSQNDL 216
            L E   V+   L
Sbjct: 204 ELTENKKVTLRSL 216


>gi|158340473|ref|YP_001521467.1| RND family efflux transporter MFP subunit [Acaryochloris marina
           MBIC11017]
 gi|158310714|gb|ABW32328.1| efflux transporter, RND family, MFP subunit [Acaryochloris marina
           MBIC11017]
          Length = 492

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 103/321 (32%), Gaps = 38/321 (11%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           ++S   G ++K  VE G ++ +G  L   +D   TD ++             + E   +D
Sbjct: 58  VRSQVDGQLQKLAVEVGDRVEKGQILGQQDDGVLTDTVNT---------ARAEREAQVVD 108

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               +  V        + +L     K +    +      +     L+ +  R  +  L +
Sbjct: 109 VAKARSQVGAAKANVEQARLALVQAKGNVLQLQN-AARANIEAARLEAQQNRQDANRLTQ 167

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           L     +S   A  +      T  + L    A S  ++ Q +  V  +   L+  I +  
Sbjct: 168 LANAGATSQQEAEQARTLAQRT-QQTLVNTQANSVQEITQAQTAVKTAEQALQAAIAQVD 226

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +N                        QR    + S L      R    + +P+ G
Sbjct: 227 IEQGTVNA----------------------TQRRVYAQQSVLNQALGQRSFTVLSAPLTG 264

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +   + N  Q    ++++    K   I  +V  + +  ++ G  A +    +   
Sbjct: 265 VVME-RLSEAGNLLQTGDSILRLG-DFKKIKITIQVPARLLSQLRMGQQAKITLDAFPQQ 322

Query: 359 REKKFKAIIEKIDPIISQQDN 379
              ++   I  I P+ +    
Sbjct: 323 ---EWSGKITLISPLANTTSR 340


>gi|332161765|ref|YP_004298342.1| Membrane-fusion protein [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|325665995|gb|ADZ42639.1| Membrane-fusion protein [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
          Length = 366

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 121/357 (33%), Gaps = 48/357 (13%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +   +V+   Q+ +G  L+  ++++T   I+  K  I++    I  E+SA+    N+
Sbjct: 47  GGKLISRKVQESQQVKKGDVLMVLDEVDTDIAIERLKAVIRSQEALIRQEESAIHIATNE 106

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             + E +   + E++   L    ++ +                     R+ +     L N
Sbjct: 107 TTLTEVSSWRKIEEIQATLSAARASENLA-------------------RTDFNRIAKLHN 147

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             S+ +++L + +  LT               + Q ER +  + +       +  +    
Sbjct: 148 TGSVSQSVLDNAKSSLTTT----------HAAVIQAERQLASAMIGTTPAQVKNLSEKES 197

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              +  ++       +K     L+Q         ++L  LE  R++ T+ +P +G ++  
Sbjct: 198 AQGMTLQSIANSRESIKNRQNILDQLLAQLDQSHAELRQLEVNRQRLTLTAPASGKVLKL 257

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             +          P + +   +   Y+   V    +   + G T T + P          
Sbjct: 258 L-YQPGEMIPAGAPAVLL--ETDRKYVDIYVNENMVTIYQPGTTVTAQVPALDSQ----V 310

Query: 364 KAIIEKIDP------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           + ++           +   ++        Y+V +   D        +L +G   EV 
Sbjct: 311 RGVVRFASAAPSFADLRMTRERGQADLTSYQVRIYTEDKP------QLLSGMTLEVD 361


>gi|209520200|ref|ZP_03268971.1| efflux pump membrane protein [Burkholderia sp. H160]
 gi|209499359|gb|EDZ99443.1| efflux pump membrane protein [Burkholderia sp. H160]
          Length = 412

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 85/273 (31%), Gaps = 32/273 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R ++ +    E + +  +A LS  Q DL     + +  AVSQ
Sbjct: 97  RVALQQAEANLAQVVRQVRGLFADDSQYEARVAASQADLSRAQDDLKRRMTVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A      +     +    
Sbjct: 157 EE------------------ISHARDSVKSAQAALDAAKQQLAANRALTANTTIADHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +KL        + T+ +P+ G +   +S           PLM IVP     ++ A 
Sbjct: 199 QAAAAKLRDAYLNHARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMAIVPLHD-VWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q++ ++ G    +    Y       F   +              P  +   N ++ 
Sbjct: 257 FKEVQLKRMRIGQPVELTADVYGSSV--PFHGKVVGFSAGTGSAFSLLPAQNATGNWIKV 314

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   V + +       + + +     A+V   
Sbjct: 315 VQRLPVRISLDPQELEKHPLRIGLSMQADVNIK 347



 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/136 (11%), Positives = 48/136 (35%), Gaps = 5/136 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +     ++   +  G PL+  +  +    +   + ++      + 
Sbjct: 56  VSGNVVQITPQVTGTVIAVNADDTQVVKAGDPLVVLDPADARVALQQAEANL----AQVV 111

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +   L   +++Y+    A ++   +  D L +   T ++        +  +     +  
Sbjct: 112 RQVRGLFADDSQYEARVAASQADLSRAQDDLKRRM-TVAQTGAVSQEEISHARDSVKSAQ 170

Query: 172 RSIYLNRLDLENKSSL 187
            ++   +  L    +L
Sbjct: 171 AALDAAKQQLAANRAL 186


>gi|30909073|gb|AAP37398.1| MesE [Leuconostoc mesenteroides subsp. mesenteroides]
          Length = 457

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 56/403 (13%), Positives = 150/403 (37%), Gaps = 38/403 (9%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +I +S++   EI V + GEI+    + +I+S  +  +    +     + +G  L+TF+  
Sbjct: 35  IILFSLIARREIVVKAGGEIVPAKILSDIQSTSNNAVDINHLAENKSVKKGETLVTFKSD 94

Query: 91  ETTDLIDLKKVSIKNLRCHIDTE----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
                + L    + N+   + +     +S +D  N+   + +  ++S     +  +   +
Sbjct: 95  NEKISVQLLNQQVNNINDRLQSLDIYKQSIIDEHNHFGGIDKFGYDSLFNGYIAQVNTLN 154

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           S  ++  +   ++  ++        +    N   L +  ++L ++ ++ +      ++++
Sbjct: 155 SEFNQQNSDKQTADQQANHQIDVLKQGQSKNNQQLSDYQAILTSINNNTRPTNNPYQSIY 214

Query: 207 E---KNAVSQNDLNQQERIVYKSTLELRENIHEQK-------NMLRHI--------NELY 248
           +       S    + +E++   +   +R+ I + +       N +  I        +   
Sbjct: 215 DNYASQLKSAQTADDKEQLKQTALSNVRQQIDQLQTNSSSYDNQIAGISKSGPLSKSSTL 274

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D+        L    +++   Q++ A+  +K + + +  +   I +P +G +      ++
Sbjct: 275 DKIADLKQQQLASSQKEINDQQQSLAELKAKQSSVNEDYQDTVIKAPESGILHLTSDKAT 334

Query: 309 SNYAQQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK--F 363
             Y  +   + +I P         +   V       +K+G    +RF        K    
Sbjct: 335 IKYFPKGTTVTQIYPMLNKRTKLSVEYYVPTSNSVGLKRGQ--NIRFVA-NQNVTKPLIL 391

Query: 364 KAIIEKID--PIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
              I+ I   PII ++      + +Y+ I  I         I+
Sbjct: 392 TGTIKTISSAPIIIKE------ESFYKCIASINVNVREHEQIK 428


>gi|161521511|ref|YP_001584938.1| secretion protein HlyD family protein [Burkholderia multivorans
           ATCC 17616]
 gi|189352320|ref|YP_001947947.1| putative multidrug resistance efflux pump [Burkholderia multivorans
           ATCC 17616]
 gi|160345561|gb|ABX18646.1| secretion protein HlyD family protein [Burkholderia multivorans
           ATCC 17616]
 gi|189336342|dbj|BAG45411.1| putative multidrug resistance efflux pump [Burkholderia multivorans
           ATCC 17616]
          Length = 363

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 81/271 (29%), Gaps = 7/271 (2%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +           L      + +      +LE K  L  A++  H  D         + A 
Sbjct: 93  LVQLDARDYAAKLAQASAEVDAARSAVAELEAKQQLQDAVIGQHAADKNASSAELTRAAA 152

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            +    +  +    S   +     +       + E  D A L     L  +   L   + 
Sbjct: 153 DRVRYRELVKADAVSNQLVERADADYAKAHAAV-ERSDAALLASKRELDVLGAQLADARA 211

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                ++   +     E  TI +P+ G +  N++      A    PL+ IVP S   +I 
Sbjct: 212 RVNTALAAQRVAALNVEYTTIRAPVDGYV-GNRTGRVGMLANVGVPLLTIVPASG-LWID 269

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV-- 389
           A     Q++ ++ G    V     A     +  ++        S       T  + ++  
Sbjct: 270 ANFKEDQLRKMRAGDRVDVSLDASAARLHGRVDSVAPATGATFSVLPPENATGNFTKIVQ 329

Query: 390 ILKITDLAFSDNNIE--LRNGFPAEVLFTAK 418
            + +         +E  LR G  A V     
Sbjct: 330 RVPVRVHLDPQPGLEQVLRPGLSAVVTVHTD 360


>gi|296116683|ref|ZP_06835293.1| multidrug resistance protein A [Gluconacetobacter hansenii ATCC
           23769]
 gi|295976895|gb|EFG83663.1| multidrug resistance protein A [Gluconacetobacter hansenii ATCC
           23769]
          Length = 363

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/353 (12%), Positives = 103/353 (29%), Gaps = 67/353 (18%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               V I     G + +  V +   + +G  L   +D +     D    +++  R     
Sbjct: 59  SGRAVTIAPHVRGYVTELLVNDNQFVHEGQVLARLDDRDWRAERDQAAANLEMARAQ--- 115

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  + +   +L  A ++    LL   G      ++ F             +   + 
Sbjct: 116 -------VASSELMLAVAQKNFPGHLLAAQGALQGAQAQEFRAQTD------FRRQHSVA 162

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               ++ D++  ++ L                       ++  + Q +  + ++ L +  
Sbjct: 163 RAATSQQDIDYATAALDE---------------------AKARVLQAQGELQQA-LPVEP 200

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           NI   ++ +        EA                          ++L   E   E   I
Sbjct: 201 NISSTQSKVSQAQAQEHEAE-------------------------ARLRQAELNLEWTVI 235

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G I   ++      AQ  Q L  IV      +I A     Q+ +++ G    +  
Sbjct: 236 RAPHDGWISQ-RNIERGTLAQVGQTLFSIV--EPEVWIVANYKETQLANMRPGQKVDIAV 292

Query: 353 PHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             Y  ++ +    ++        S       T  Y +++ ++      D  + 
Sbjct: 293 DAYPFLKLKGHVDSLQLGTGATFSAFPPENATGNYVKIVQRVPVKILIDEGLR 345


>gi|262279169|ref|ZP_06056954.1| multidrug resistance efflux pump [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259520|gb|EEY78253.1| multidrug resistance efflux pump [Acinetobacter calcoaceticus
           RUH2202]
          Length = 362

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 55/412 (13%), Positives = 120/412 (29%), Gaps = 88/412 (21%)

Query: 20  MTLLSIIGIIGLITW---SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           + +++ I ++  I W    I LP  I  +    +  E +   I    SG I++  +++  
Sbjct: 28  VMVIAFIIVLVSILWVLKLIFLPSSIVETDDARVDVEYS--TIAPKVSGNIEEIYIKDHQ 85

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L            D +           +  K+  D       V  +    R  
Sbjct: 86  TVKKGQLLARI---------DARDYQAALAEAESNYAKAQADLSEAMLAVDRQPTVIR-- 134

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                                                      + E +   + A ++  +
Sbjct: 135 -------------------------------------------ETEAQLRKVEAGITLTK 151

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +    + L    A S+    Q +  + +   +L  +  +  +    +N+   +   + A
Sbjct: 152 DNTARYEQLQALGAESRLITQQSKTTLTEQYADLDSSKEKVIDAQYQLNQYKIQVQAKQA 211

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              +  +                    +       + +PI G I   +S +  N+     
Sbjct: 212 ALKQAQAAL---------------DKAKLNLSYTEVRAPIDGMI-GQKSANVGNFVGAGN 255

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK------- 369
           PLM +VP +   Y+ A     +++ +K G    V    Y      + K +++        
Sbjct: 256 PLMVVVPLN-QVYVEANFREIELKQIKIGQPVNVYVDAYN----IELKGVVDSFSPSTGA 310

Query: 370 -IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              PI +       T+    + L+I  +    +   LR G    V       
Sbjct: 311 FFSPISATNATGNFTKIVQRLPLRIKLVENQPDIKLLRPGLSVLVSVDTTKK 362


>gi|206577106|ref|YP_002238806.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|288935737|ref|YP_003439796.1| secretion protein HlyD [Klebsiella variicola At-22]
 gi|290509763|ref|ZP_06549134.1| membrane fusion protein (MFP) family auxiliary transporter
           [Klebsiella sp. 1_1_55]
 gi|206566164|gb|ACI07940.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|288890446|gb|ADC58764.1| secretion protein HlyD family protein [Klebsiella variicola At-22]
 gi|289779157|gb|EFD87154.1| membrane fusion protein (MFP) family auxiliary transporter
           [Klebsiella sp. 1_1_55]
          Length = 361

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 85/301 (28%), Gaps = 29/301 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V + A     E L     + +          ++    +L+  L + +S        E   
Sbjct: 77  VKDFAIVQPGEVLFQIDDRIYKQRVHQAQATLAMKEAALRNNLQQRKSAEATIAKNEAAL 136

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              RA     Q DL  ++ L    ++S     ++      S  +   +I + K  L    
Sbjct: 137 QNARAQNLKIQADLKRVQELTADGSLS----IRERDSARASAAQGAADIEQAKAALEMSR 192

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +  +   +   +   ++           A   + L + +   +   I++P  G +     
Sbjct: 193 QDRESTIVNRDSLEADV-----------ASAKAALELAQIDLQNTQIIAPTGGQLGQISV 241

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA--------D 357
                Y      L  +VP        A +   Q+  V+ G   T                
Sbjct: 242 R-LGAYVSAGTHLTSLVPPQHWVI--ANLKETQLAEVRIGQPVTFTVDALNGERFHGKVQ 298

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                       I P  +  +     Q    + ++IT       +  LR G   +V    
Sbjct: 299 SISPATGVEFSAISPDNATGNFVKIAQ---RIPVRITVNDGQKYSEHLRPGMSVQVTIDT 355

Query: 418 K 418
           +
Sbjct: 356 R 356



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 52/194 (26%), Gaps = 10/194 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                  I    +G I    V++ + +  G  L   +D      +   + ++      + 
Sbjct: 57  VRGQTTFISPQVNGYITAVNVKDFAIVQPGEVLFQIDDRIYKQRVHQAQATLAMKEAALR 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                           E A ++   Q L              +  +S   R      +  
Sbjct: 117 NNLQQRKSAEATIAKNEAALQNARAQNLKIQADLKRVQELTADGSLSIRERD-----SAR 171

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            S      D+E   + L       +  +    +L    A ++  L      + +  L+  
Sbjct: 172 ASAAQGAADIEQAKAALEMSRQDRESTIVNRDSLEADVASAKAAL-----ELAQIDLQNT 226

Query: 232 ENIHEQKNMLRHIN 245
           + I      L  I+
Sbjct: 227 QIIAPTGGQLGQIS 240


>gi|225182092|ref|ZP_03735521.1| efflux transporter, RND family, MFP subunit [Dethiobacter
           alkaliphilus AHT 1]
 gi|225167211|gb|EEG76033.1| efflux transporter, RND family, MFP subunit [Dethiobacter
           alkaliphilus AHT 1]
          Length = 402

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 79/255 (30%), Gaps = 21/255 (8%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            + R           K  L +      ++++   +   E+   ++N L + E  +     
Sbjct: 99  AQQRIKKAELALQMAKLQLEQVTSGPREEEVARARINLEQ---AENKLKEAEETLSVLKD 155

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYL----KEISRDLEQNQRTFADEMSKLTILE 284
           +      +  N  R ++    +  L    Y     K    D+ Q +       + L    
Sbjct: 156 DEETPSGQLDNAQREVDNADAQYRLAQQQYSLTKNKYTQNDIAQAEARVEQAANDLQEAR 215

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
              EQ TI +PI G +     +        +  L+K++       + A +    I  ++K
Sbjct: 216 ALAEQGTITAPIDGVVAELHIY-PGAVVSGNSNLIKLI-DLNRLIVEALIDETDIIAIEK 273

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G  A +          +  +  +  I P+   +   +     Y VI+ +  +A       
Sbjct: 274 GQQAAITLDSLD---TETLEGTVGSISPLAKNESGIIN----YPVIISLEHVAAG----- 321

Query: 405 LRNGFPAEVLFTAKN 419
                 A V    + 
Sbjct: 322 FYPDMTAVVTIYLEE 336



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 61/172 (35%), Gaps = 6/172 (3%)

Query: 46  SSGEILNE-DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + G +  E   +V+I +P +G++++  VE G+ +  G  L           I   +++++
Sbjct: 52  AVGTLKPELGAMVQIDTPGAGVVEEVLVEQGAAVKAGDTLAVITIDGAQQRIKKAELALQ 111

Query: 105 NLRCHIDT-----EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +  ++       +  +       +  E   +  EE L        +   ++ N     
Sbjct: 112 MAKLQLEQVTSGPREEEVARARINLEQAENKLKEAEETLSVLKDDEETPSGQLDNAQREV 171

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + +L + +         +N  +   A +     DL   + L E+  +
Sbjct: 172 DNADAQYRLAQQQYSLTKNKYTQNDIAQAEARVEQAANDLQEARALAEQGTI 223


>gi|222081055|ref|YP_002540418.1| multidrug resistance efflux system protein [Agrobacterium
           radiobacter K84]
 gi|221725734|gb|ACM28823.1| multidrug resistance efflux system protein [Agrobacterium
           radiobacter K84]
          Length = 387

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 92/291 (31%), Gaps = 27/291 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L     +             ++   ++     ++R         +      RA L   
Sbjct: 112 QVLARIDDRDFQAALSQAKADFNAADAAITNIDAQIRLQQSVIDQAKASLDASRASLVYA 171

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q D      L    A +Q+   Q + +  ++   +  +          +  L  E     
Sbjct: 172 QSDAARNARLIANGAGTQSRAEQTQSLNDQAVAAVERDQAAFVAAQNKVPVLQTE----- 226

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                   RD    QR  AD  + +   E       I++ + GT+   +S     +    
Sbjct: 227 --------RDQAVAQRDHAD--AAVHQAELNLSYTDIVAAVDGTV-GARSIRVGQFVTAG 275

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM +VP   +  + A     Q+ +V+      ++   + D+     K  ++ I P   
Sbjct: 276 TQLMAVVPLHAVYVV-ANFKETQLTNVRPRQPVEIKIDSFPDV---AIKGHVDSISPASG 331

Query: 376 QQ----DNNLQTQEYYEVILKIT-DLAFSDNNIE--LRNGFPAEVLFTAKN 419
            +      +  T  + +++ +I   +   D  +   LR+G   E     ++
Sbjct: 332 LEFSLLPPDNATGNFTKIVQRIPVKILIDDEGLVGLLRSGMSVEPEIDTRD 382



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/247 (11%), Positives = 67/247 (27%), Gaps = 9/247 (3%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I    +G IK+  V +      G  L   +D +    +   K         I    + +
Sbjct: 88  TIAPKVTGYIKEVLVNDNDTAKAGQVLARIDDRDFQAALSQAKADFNAADAAITNIDAQI 147

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
               +  D  + + ++    L+            + N   +         L       + 
Sbjct: 148 RLQQSVIDQAKASLDASRASLVYAQSDAARNARLIANGAGTQSRAEQTQSLNDQAVAAVE 207

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R      ++  +  +   ++D  + +      AV Q +LN            +   +  +
Sbjct: 208 RDQAAFVAAQNKVPVLQTERDQAVAQRDHADAAVHQAELN---LSYTDIVAAVDGTVGAR 264

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL---- 293
              +        +       +   +  + ++ Q T       + I   +     I     
Sbjct: 265 SIRVGQFVTAGTQLMAVVPLHAVYVVANFKETQLTNVRPRQPVEIKIDSFPDVAIKGHVD 324

Query: 294 --SPIAG 298
             SP +G
Sbjct: 325 SISPASG 331


>gi|32473032|ref|NP_866026.1| hypothetical protein RB4310 [Rhodopirellula baltica SH 1]
 gi|32397711|emb|CAD73712.1| probable membrane protein [Rhodopirellula baltica SH 1]
          Length = 519

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 109/322 (33%), Gaps = 51/322 (15%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           S G I      + + +   G+I+   V  G  + +G P+     I+    +   K ++  
Sbjct: 85  SPGWIEPRPTAISVAALAPGVIESLLVVEGQPVKRGEPVARLISIDAELNVQQAKNTVAI 144

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +  +   ++  +    ++    K     E QL D           +     + + +   
Sbjct: 145 RQGELQRAEAEWNAAMVRF----KNPVHLEVQLADAES--------MLARAETELAKLPF 192

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           M      ++   R +++ K S                     + A+S   + + E     
Sbjct: 193 MIEAAQANVEYARNNMQGKRS--------------------AEGAISGRIVARAESDHAA 232

Query: 226 STLELRENIHEQKNMLRHINELYDEANL--EFANYLKEISRDLEQNQRTFADEMS----- 278
            + +L+E    Q N+ R ++ L  +     +  N L E +R +E+ +   A   +     
Sbjct: 233 ESAKLQELQRRQPNLQREVDALKTKVRAFEKQLNLLVEETRQVEEAKAKVASSKALWEEA 292

Query: 279 --KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--------QSQPLMKIVPHSKLT 328
             +L   E   E+  + +P+ G I+     S               +  ++++       
Sbjct: 293 KIELRQAELALERNVVKAPMDGRILRL-IASPGTRVSGMASSTGHSASTVVEMY-DPDRL 350

Query: 329 YIRAKVTPKQIQHVKKGYTATV 350
            +RA V  + +  ++KG    +
Sbjct: 351 QVRADVRLEDVPMIRKGQPVEI 372


>gi|300853795|ref|YP_003778779.1| hypothetical protein CLJU_c05950 [Clostridium ljungdahlii DSM
           13528]
 gi|300433910|gb|ADK13677.1| hypothetical protein CLJU_c05950 [Clostridium ljungdahlii DSM
           13528]
          Length = 264

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 73/205 (35%), Gaps = 22/205 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN---- 269
             +   + ++   T +L+  + + +N L   N     A     N           N    
Sbjct: 74  TKVTDGQVVIKLDTQDLQNQVDQAQNALNAANSNLTSAQSSTYNSTSLTGSSTSSNISTY 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q       + L   + +    TI SPIAGT+         + A   +PL+ IV +S   Y
Sbjct: 134 QSQVNQAQAALKSAQNSLNNATITSPIAGTVSAKNVN-VGDMAYPGKPLISIV-NSDKLY 191

Query: 330 IRAKVTPKQI-QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           + A   P  I   +  G    +R P   D     F+  +  I+  +  Q +++  Q    
Sbjct: 192 VNAY-APSYILNKINVGQNVIIRVPDLPDQ---DFQGKVTVINSKVEPQSSDILVQ---- 243

Query: 389 VILKITDLAFSDNNIELRNGFPAEV 413
                  ++ +  N  L+ G  AE+
Sbjct: 244 -------VSINGKNPSLKPGMFAEI 261



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 44/113 (38%), Gaps = 2/113 (1%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+I   ++   I S  S  + +  V+ G+++  G  ++  +  +  + +D  + ++    
Sbjct: 47  GKIATNEDTQ-ITSNISARVSEVSVDIGTKVTDGQVVIKLDTQDLQNQVDQAQNALNAAN 105

Query: 108 CHI-DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            ++   + S  +  +           + + Q+        S  + + N  I+S
Sbjct: 106 SNLTSAQSSTYNSTSLTGSSTSSNISTYQSQVNQAQAALKSAQNSLNNATITS 158


>gi|260777186|ref|ZP_05886080.1| multidrug resistance protein A [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260606852|gb|EEX33126.1| multidrug resistance protein A [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 334

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 92/286 (32%), Gaps = 24/286 (8%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     +      ++    ++             +       + ++K +  +A      +
Sbjct: 69  LAQLDDREFVIKEQLAEATLAQSQAEQSNADAAYKMQKSTIEEYQSKVTSAKAKYQYSLQ 128

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
               ++ L ++N VS+               E        K       E       +  +
Sbjct: 129 QYKRLQALEKQNYVSK--------------GERDNGASAYKVDKAAYLEAKASLKTQ-QD 173

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L  +  ++EQ         + L+  +       I++PI G I  N++       Q  Q 
Sbjct: 174 KLSVLESEIEQADAMVKQATASLSQAKLELGYTRIVAPIDGVI-SNRNLQVGMMVQPGQS 232

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++ IV   +  +I A     Q   + KG +  V    Y     K F A I+ + P     
Sbjct: 233 VVSIV-SDRTPWILANFKETQKSRMHKGQSVDVTIDAYP---GKTFSARIDSVSPATGAT 288

Query: 378 ----DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 +  T  + +V+ ++      ++++++ NG  A V    + 
Sbjct: 289 FALLPPDNATGNFTKVVQRVPVKIVFNDSVQVDNGLSAVVTVDTRQ 334


>gi|325291080|ref|YP_004267261.1| secretion protein HlyD family protein [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324966481|gb|ADY57260.1| secretion protein HlyD family protein [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 339

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 55/405 (13%), Positives = 115/405 (28%), Gaps = 90/405 (22%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSS-------GEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +   +G++G    +++  +   V SS       G+   E   VE+ +   G + + +V+ 
Sbjct: 10  VFIGLGVVGAAV-AMVFLLSGVVHSSDGSRELTGK--AEAKTVEVSTKIPGRVIQIKVKE 66

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G  L   +D +           I      I    +A+D+               
Sbjct: 67  GQTVKAGDVLAQIDDSDLKGNEQQVLAGIAAAEGSIAKAGAAVDYA-------------- 112

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                       ++         + + ++   ++                          
Sbjct: 113 -----------EASSGAALEKARAGLAKAQADEV-------------------------L 136

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            +K    ++ L++  A+SQ DL++ +     +       +   +  L        + +L 
Sbjct: 137 AEKTYQRLEELWKSGAISQMDLDKAKHDYDAAQA----GVAAAEGDLATAGAAQTQVDLY 192

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A+            Q       + L I+    ++  I +P  G I              
Sbjct: 193 RADARS--------AQAALDKSQADLQIVRNNLKETVIKAPCDGVITAVNI-EEKELVSS 243

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--- 371
              LM +    +  ++  KV    +  +  G    V  P       K  K  IE I    
Sbjct: 244 GFALMSVT-DYQENWVNLKVPQNLLGQLAVGNPLEVYLPG---EEGKTIKGTIEDISSKP 299

Query: 372 ---PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                 +  D   +    Y V ++           EL+ G    V
Sbjct: 300 EFATARATNDRGEKDIISYNVKIRTDSA-------ELKPGMNVSV 337


>gi|301311019|ref|ZP_07216948.1| putative multidrug resistance protein [Bacteroides sp. 20_3]
 gi|300831082|gb|EFK61723.1| putative multidrug resistance protein [Bacteroides sp. 20_3]
          Length = 344

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 119/404 (29%), Gaps = 90/404 (22%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIK------SPFSGIIKKFQVENGSQILQG 81
           ++G++    +  +       G++   DN    +      S   G I+K   +   ++ +G
Sbjct: 13  VVGVLIACGIAWVSAKFIHLGKVEYTDNAQVKQLIVPVNSRVQGFIQKIYFDEYQKVRKG 72

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L   ED E               R  +   ++                          
Sbjct: 73  DTLAIIEDAEF--------------RLRLAQAEAD------------------------- 93

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                      +   +S          T   +I ++   ++      +  L + +++   
Sbjct: 94  -----------YQNALSGKTVMTSTIHTTQNNISVSDAGIQEA----KIRLDNAEREYKR 138

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            KNL E++AV++   +        S                   EL        A   +E
Sbjct: 139 YKNLLEQDAVTKQQYDAIHTNYEASKARY---------------ELLLRQKQSTALVKQE 183

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            ++ L QN        ++L I         I++P  GT    +        Q  Q ++ +
Sbjct: 184 QTQRLAQNDAGIKLAEAELEIARLNLSYTVIVAPCDGT-TGRKEIQEGQLIQPGQTVVDL 242

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII------S 375
           V  +    + A     Q  ++ +G    +       I    FK  ++ I           
Sbjct: 243 VDLNSKWIM-ANYKETQTANILEGQPVEIEVDAIPGI---VFKGQVKSISQATGASFSLF 298

Query: 376 QQDNNLQT----QEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            QDN+       ++   + ++ ++    ++   LR G   E L 
Sbjct: 299 PQDNSAGNFVKIEQRIPIRIEFSEENKPEDMERLRAGMNVECLV 342


>gi|268590431|ref|ZP_06124652.1| multidrug resistance protein A [Providencia rettgeri DSM 1131]
 gi|291314345|gb|EFE54798.1| multidrug resistance protein A [Providencia rettgeri DSM 1131]
          Length = 393

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 88/278 (31%), Gaps = 34/278 (12%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +     +      L   + + R   +N   L+    + R+ L+  Q DL   + L   +
Sbjct: 95  PRDAELALDKAKTELANSVRQTRQHMVNSRQLQANIEVKRSELNRLQNDLKRREVLGSSH 154

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + + +L      V  +   L   I +       +     E          ++       
Sbjct: 155 VIGKEELQHAREAVVSAKAALDMAIEQYNANQAIVLNSSIEKQPAVEQAATQVRNAWL-- 212

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                           T ++  I+SP+ G +   +S    +    S PLM IVP +   +
Sbjct: 213 ----------------TLQRTKIVSPVDGYVSR-RSVQVGSQITPSTPLMAIVPSNG-MW 254

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDN 379
           I A     Q+  ++ G  A V    +   ++  F   +  +D          P  +   N
Sbjct: 255 IDANFKETQLADMRIGQPAKV-ITDF-YGKDIVFNGTVVGLDMGTGSAFSLLPAQNASGN 312

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            ++  +   V + + +    +  + +  G   EV    
Sbjct: 313 WIKVVQRLPVRIALDENQLEEYPLRI--GLSTEVTVDT 348



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 54/176 (30%), Gaps = 3/176 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I+S  SG +    V+N   +  GT L+  +  +    +D  K  + N      
Sbjct: 58  VAGNQVQIQSQVSGSVMTVNVDNTDFVTSGTVLVELDPRDAELALDKAKTELANSVRQTR 117

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                   L    +V        +  L   + LG  H    +   +   +V  +      
Sbjct: 118 QHMVNSRQLQANIEVKRSELNRLQNDLKRREVLGSSHVIGKEELQHAREAVVSAKAALDM 177

Query: 170 RMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
            +     N+ + L +      A+  +  +       L     VS  D     R V 
Sbjct: 178 AIEQYNANQAIVLNSSIEKQPAVEQAATQVRNAWLTLQRTKIVSPVDGYVSRRSVQ 233


>gi|332976967|gb|EGK13781.1| HlyD family secretion protein [Psychrobacter sp. 1501(2011)]
          Length = 333

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 105/330 (31%), Gaps = 29/330 (8%)

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           L++     ++ +I    + ++    K  V +     + + L+      +S        G+
Sbjct: 25  LQQTENSYVKGNITLLSAQINGYIEKVYVSDFEDVKQGQPLVKVSSANYSQQVVQAESGL 84

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                +L  +   +     +    + K + ++  L    + L  +++L    AVSQN+++
Sbjct: 85  EQATTNLANQQQIIEQRKADVKAAQAKVAQVKTQLELSIQQLKRLESLVGVGAVSQNEVD 144

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             +  V  +   L + I           E    A +     + +I               
Sbjct: 145 TAKAAVKNNEALLSQAIASVDVA----REGQKTAEVTKIGLVAQIK-----------SAN 189

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++L      +E   I +P +G +      +      Q   L+ ++P S   ++ A     
Sbjct: 190 AQLKQANTNQEYGLITAPTSGKLGQINIRT-GQLVTQGTQLVYLIPKS--MWVIANFKET 246

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEV 389
           QI  +K G  A          +   F  +++ I P        I +       T+    +
Sbjct: 247 QIDKMKIGQKAWFTVDALGKQK---FTGVVKSISPATGSEFSVIKTDNATGNFTKVVQRI 303

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            ++I          EL  G          +
Sbjct: 304 SVRIDIDGNQSRLNELIPGMSVVATVDTSS 333


>gi|226328844|ref|ZP_03804362.1| hypothetical protein PROPEN_02745 [Proteus penneri ATCC 35198]
 gi|225202030|gb|EEG84384.1| hypothetical protein PROPEN_02745 [Proteus penneri ATCC 35198]
          Length = 210

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 57/155 (36%), Gaps = 2/155 (1%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +    +  ++  I  SIL  +EI  +++G++       EIK   + I+++  V+ G  
Sbjct: 58  RLIAYFIMAFLVIAIILSILGKVEIVATANGKLALSGRSKEIKPIENSIVQEIMVKEGEL 117

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  LL           D  K     L+  ++  +  +   + + + L +     +  
Sbjct: 118 VKKGHVLLKL--TALGAEADTLKSQSSLLQAKLEQFRYQMLAKSIESNKLPEIKLPNDPD 175

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           L +         + +     S+       K  + R
Sbjct: 176 LQNISEDEMLRLTSLIEEQFSTWQNQKYQKRIKFR 210


>gi|114048996|ref|YP_739546.1| secretion protein HlyD family protein [Shewanella sp. MR-7]
 gi|113890438|gb|ABI44489.1| secretion protein HlyD family protein [Shewanella sp. MR-7]
          Length = 351

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 95/302 (31%), Gaps = 27/302 (8%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DV +     + E L        S         ++S    L+    ++   +         
Sbjct: 58  DVTDNQHVRKGELLAQLEDNQFSAKVSQAEASLASAKADLQTLAAKVELQHALISQASAG 117

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A     ++ LT  K L   N  SQ+D++Q +     +   L E         R +
Sbjct: 118 VVAAQADKLRAEQQLTRAKKLKVSNYSSQDDVDQLQAGFDSAAAGLDEAKALLVAKEREL 177

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                             +  L Q         + L + +       + +P +G I   +
Sbjct: 178 AV---------------FNAQLNQAGSVVEQSNAALELAKIQLNDTRVTAPFSGVI-GKR 221

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y Q  Q L  +VP     +I A     QIQH++ G +  V    + D   K F 
Sbjct: 222 GAMVGQYVQPGQALYSLVP-DGAVWITANFKETQIQHMQPGQSVQVSLDAFPD---KTFT 277

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTA 417
            +I+ + P    +         T  + +++ +I     L  S+    +  G  A V    
Sbjct: 278 GVIDSLSPASGAKFSLLPAENATGNFTKIVQRIPVRIRLDLSEEEARVVPGLSAVVKVDT 337

Query: 418 KN 419
            +
Sbjct: 338 AS 339


>gi|227875211|ref|ZP_03993353.1| possible membrane-fusion protein [Mobiluncus mulieris ATCC 35243]
 gi|227844116|gb|EEJ54283.1| possible membrane-fusion protein [Mobiluncus mulieris ATCC 35243]
          Length = 752

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/294 (11%), Positives = 92/294 (31%), Gaps = 14/294 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +     +      ++  R       +AL   +   D+   +  S +  L     +     
Sbjct: 255 VTQEAALRTAYQEVEKTRMSASRIGAALKEADRMRDLESISLASDKADLALRQKELQKAQ 314

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL----SSHQKDLTMMKNL 205
           +   +         +      +  +     + E K+  ++       S  +++   ++  
Sbjct: 315 NDS-SLSKEKKAEVINALQWEINHLTEVIAEGEAKTQAVKEKYDTAWSQEKENKLKIRQA 373

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE--LYDEANLEFANYLKEIS 263
            E   +++         V +   + ++ +   ++ +   N      EA  +  N   + +
Sbjct: 374 TENLGMARRQYRLALLKVDRELADAQDAVARAQDGILDANAGLQQAEATAQLQNRTNQRA 433

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            +  ++  T A     +  L       T+ +P+ G I    +         +Q  + +V 
Sbjct: 434 IETARSGATNAQGQQAIAKLRADINSATVRAPMTGVITSVTAK----VGSPAQGALFMVE 489

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            ++   ++  V  K +  +  G   T + P   D +       +  I P  S+ 
Sbjct: 490 DNQNLLVKTAVKEKDVSKLSVGQQVTFKTPATGDKKY---TGTVTFISPAASRD 540


>gi|186687177|ref|YP_001870320.1| RND family efflux transporter MFP subunit [Nostoc punctiforme PCC
           73102]
 gi|186469480|gb|ACC85279.1| efflux transporter, RND family, MFP subunit [Nostoc punctiforme PCC
           73102]
          Length = 471

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/383 (12%), Positives = 129/383 (33%), Gaps = 63/383 (16%)

Query: 40  IEISVSSSGEILNEDN-VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           I + V+  G +    N   ++    +G +    V +G Q+ +G  +   ++ +  D ++ 
Sbjct: 60  IPVVVNIRGTVSASPNANAKVSPAVAGKLVAVTVVSGQQVTKGQIIARLDNRQNLDQVNQ 119

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
              ++++ +  +   ++ L+                         K  +   +++N  ++
Sbjct: 120 VTAALRSAQAGVAQARTNLE----------------------LAQKNFARSRRLYNEALN 157

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
              ++    +   R             +  ++ L   Q +L   + LF++    + DL  
Sbjct: 158 PTQKATDPGIQGARGG----------VAQAQSNLILAQNNLQRQQQLFKEGITPKKDLIA 207

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  +  +   L       + +    + +  ++ +E A      +   E+      D+  
Sbjct: 208 AQNQIETAQGALVTAQAAVQQVAPDKDVIAAQSQVETAKAQLAAAIAQEKQANASRDQ-- 265

Query: 279 KLTILEKTREQKTILSPIAGTIVY---NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                +       I SPI G +     N S ++      + P++++V +     +   + 
Sbjct: 266 ----AQTQLSFTDIRSPITGIVANRFLNNSDTT----DPNTPVIQVV-NLSKVIVNGNIN 316

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
             +  +++ G +A V       +    +  ++  + PI+  Q N    Q    + ++ + 
Sbjct: 317 ADKKANIRVGQSAKVL-----SLTGSSYSGVVTAVSPIVDPQSNTWNIQ----IRVENSG 367

Query: 396 LAFSDNNIELRNGFPAEVLFTAK 418
               +N I            T  
Sbjct: 368 GQLKENQI-------VTASITTD 383


>gi|78184271|ref|YP_376706.1| secretion protein HlyD [Synechococcus sp. CC9902]
 gi|78168565|gb|ABB25662.1| Secretion protein HlyD [Synechococcus sp. CC9902]
          Length = 417

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 96/268 (35%), Gaps = 30/268 (11%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND--LNQQERIVYKS 226
           T  R      +    +   ++ +  S ++   + K L ++  V + +  L   +R     
Sbjct: 93  TAERGALSGVVTASGELQAIQKVNVSPRQQGLLQKLLVDEGDVVKANQILAVMDRGDLDD 152

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEF-------ANYLKEISRDLEQNQRTFADEMSK 279
            L+ RE + +Q      I +   E   +        A+    +  ++   Q        +
Sbjct: 153 RLQEREALLQQAKAQYTIKKQEYERRNKLFEMAVISADDFSTVQNEMLARQAAMTAAQER 212

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--------IVPHSKLTYIR 331
           +  LE+T+ +  I +P AG I   +      +   +             IV  S+   + 
Sbjct: 213 VEQLEQTKRELDIRAPFAGMITA-RYAEPGAFVTPTTAASATAGATSSSIVELSQGLEVS 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A+V    I  +  G  A +R   + D R   F+A + +I P   +Q+N +     +EV L
Sbjct: 272 ARVPESDIGRIAIGQAAQIRVDAFPDER---FQARVSEIAPRAVKQENVIS----FEVKL 324

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
                A  +   +L  G   +V F    
Sbjct: 325 -----ALMNPPKKLLIGMTTDVDFQTGR 347



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/274 (10%), Positives = 86/274 (31%), Gaps = 19/274 (6%)

Query: 47  SGEILNEDNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           SG +     +  I+         G+++K  V+ G  +     L   +  +  D +  ++ 
Sbjct: 100 SGVVTASGELQAIQKVNVSPRQQGLLQKLLVDEGDVVKANQILAVMDRGDLDDRLQEREA 159

Query: 102 SIKNLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            ++  +     +K   +  N  ++   +    F + + ++L       +   +V     +
Sbjct: 160 LLQQAKAQYTIKKQEYERRNKLFEMAVISADDFSTVQNEMLARQAAMTAAQERVEQLEQT 219

Query: 159 SVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                ++     M +         +   ++      ++    + + + L     V ++D+
Sbjct: 220 KRELDIRAPFAGMITARYAEPGAFVTPTTAASATAGATSSSIVELSQGLEVSARVPESDI 279

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
               RI      ++R +    +     ++E+   A  +      E+   L    +     
Sbjct: 280 ---GRIAIGQAAQIRVDAFPDERFQARVSEIAPRAVKQENVISFEVKLALMNPPKKL--- 333

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              L  +    + +T  S +   +      +   
Sbjct: 334 ---LIGMTTDVDFQTGRSAVKTLVPTVAIVTEGG 364


>gi|148239952|ref|YP_001225339.1| membrane-fusion protein [Synechococcus sp. WH 7803]
 gi|147848491|emb|CAK24042.1| Membrane-fusion protein [Synechococcus sp. WH 7803]
          Length = 390

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 81/240 (33%), Gaps = 35/240 (14%)

Query: 203 KNLFEKNAVSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           + L +   V + D + + + +    + +  + + E   + R     ++    ++  Y K 
Sbjct: 96  QGLLDALYVDEGDAVTKGQVLARMDSGDFTDRMDELSALERQARADFEAKRADYIRYQKL 155

Query: 262 ------ISRDLEQNQRTFADEMSKLTILEKTREQKT-------ILSPIAGTIVYNQSFSS 308
                  + DL+  +  F      LT   +  +Q+        I +P +G I   +    
Sbjct: 156 ENSGAISASDLDGYRAAFLSSKEALTAARERIQQRDVEGNELLIRAPFSGVITE-RFAEP 214

Query: 309 SNYAQQ--------SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
             +                 IV  S+   + AKV    I  ++ G  ATVR   + D R 
Sbjct: 215 GAFVTPTTTASANAGATSSSIVELSEGLEVAAKVPESDIGRIRIGQDATVRVDAFPDQRF 274

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               A +  I P   + DN +  +          +L   D    LR G   +V F    T
Sbjct: 275 P---ARVRDIAPRAEKTDNVISFEV---------ELTLIDPPPTLRIGMTVDVDFQTGRT 322



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 52/134 (38%), Gaps = 5/134 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   +++SGE+      V +     G++    V+ G  + +G  L   +  + TD +D  
Sbjct: 73  LPGVITASGELEPI-RRVNVSPKRQGLLDALYVDEGDAVTKGQVLARMDSGDFTDRMD-- 129

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++S    +   D E    D++  +Y  LE +       L  +   + S+   +       
Sbjct: 130 ELSALERQARADFEAKRADYI--RYQKLENSGAISASDLDGYRAAFLSSKEALTAARERI 187

Query: 160 VYRSLKMKLTRMRS 173
             R ++     +R+
Sbjct: 188 QQRDVEGNELLIRA 201


>gi|295110932|emb|CBL27682.1| RND family efflux transporter, MFP subunit [Synergistetes bacterium
           SGP1]
          Length = 425

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 15/179 (8%)

Query: 245 NELYDEANLEFANY-LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            +L   + L+ A   L      L +N        + L   E +     I+SP+ G ++  
Sbjct: 136 RDLIARSELDAAETKLSLARASLAENNAQVVQAKASLKQAETSLGYARIVSPVDGVVIAR 195

Query: 304 QSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
           +       A   Q   L  I        I A V    I  + +G  A  RF  + D    
Sbjct: 196 KVDVGQTVAASLQTPTLFSIARDLTRMQIEASVDEADIGRIAEGQRAICRFDAWPDTT-- 253

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            F+  + ++  + S   +N+ T   Y VI+++      ++ ++L+    A V    +  
Sbjct: 254 -FEGTVTQV-RLKSTVVSNVVT---YTVIIRVD-----NSELKLKPSMTANVTIVTEEK 302



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 71/206 (34%), Gaps = 18/206 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++G +     +V++ +  SG IK+  V+  S++ +G  +   +       I+  
Sbjct: 44  ISATVSATGSVNPV-EMVDVGTQVSGTIKEIYVDYNSRVTKGQLIAMLDTDMLQSRIEEA 102

Query: 100 KVSIKNLRCHIDTEKSALD-----------------FLNNKYDVLEKAFESREEQLLDFL 142
           K ++   +    + K+++                     ++ D  E         L +  
Sbjct: 103 KAALALAQARTTSAKASVADADRTFKRNKELWGRDLIARSELDAAETKLSLARASLAENN 162

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            +     + +     S  Y  +   +  +       +     +SL    L S  +DLT M
Sbjct: 163 AQVVQAKASLKQAETSLGYARIVSPVDGVVIARKVDVGQTVAASLQTPTLFSIARDLTRM 222

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTL 228
           +     +      + + +R + +   
Sbjct: 223 QIEASVDEADIGRIAEGQRAICRFDA 248


>gi|237807805|ref|YP_002892245.1| secretion protein HlyD family protein [Tolumonas auensis DSM 9187]
 gi|237500066|gb|ACQ92659.1| secretion protein HlyD family protein [Tolumonas auensis DSM 9187]
          Length = 402

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 48/368 (13%), Positives = 109/368 (29%), Gaps = 63/368 (17%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E+     GI+K   V +  Q+  G  L+  +D +    +   +  +   R  + +  +  
Sbjct: 69  EVTPAVGGIVKAVNVVDTQQVRMGDVLVVLDDTDARLALAQAEADLGLARRRVHSYLAND 128

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + L                                                 ++++   +
Sbjct: 129 EGLA-----------------------------------------------AQVKAREAD 141

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
               + + +  +A L+  Q D+   + L    +VS  +L   +  + ++   L       
Sbjct: 142 EKRAQAQLAAAQADLARAQVDMQRRQALLASGSVSGEELTNAKNALAQAEANLTSAKAAA 201

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              + +            A  +        +         ++    +   E+  I +P+ 
Sbjct: 202 AQSVANRMSTIGSKKANAALTVDSTV----ETNPEVLLAKARYEQAKVDLERTVIKAPVD 257

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GTI   Q        Q   PL+ +VP     ++ A     +++ VK G    V    Y D
Sbjct: 258 GTIAKRQV-QVGRRVQIGAPLLSVVPTQN-IHVDANFKEVELRDVKIGQPVEVTADIYGD 315

Query: 358 IREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                ++ ++  +          I +Q       +    + ++IT  A    +  L+ G 
Sbjct: 316 KV--VYRGVVSGLSGGTGSAFSMIPAQNATGNWIKVVQRLPVRITLDANEMKHRPLQVGL 373

Query: 410 PAEVLFTA 417
             E     
Sbjct: 374 SMEATIDT 381


>gi|330984279|gb|EGH82382.1| multidrug resistance protein A [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 327

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 87/290 (30%), Gaps = 28/290 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +     + +          ++S   S++     +     N    +      +A       
Sbjct: 47  IAKLDARPYRAAYDQSLASVASKQASVEKIQASLTQQAQNIKQAQALVQSAKADADHAAH 106

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           + +    L  +N  S   L   ++    S  EL  +     +    ++ L          
Sbjct: 107 EYSRHAPLVARNIESGESLADLKKTRDSSAAELVADQAAAHSAQLQVSVL---------- 156

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                  DL Q +    +  +       +     I SPI+G +  ++S     Y Q    
Sbjct: 157 -----QADLAQAKADLLEAQANAEQARISLTDTEIQSPISGRV-GDKSVRVGAYVQSGTR 210

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP----- 372
           ++ +VP +K+  + A     QI  ++ G   +V          +    +I+   P     
Sbjct: 211 MLTLVPTNKIYAV-ANFKETQIGKMRIGQPVSVNVDALP---GQPITGVIDSFSPGTGSD 266

Query: 373 ---IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              + SQ      T+    V +KI      +    L +G   +V      
Sbjct: 267 FALLPSQNATGNFTKIVQRVPVKIRLQVSREIQARLTSGMSIDVEVDTHE 316



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 55/163 (33%), Gaps = 5/163 (3%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            +    SG + +  V +   +  G+ +   +        D    S+ + +  ++  +++L
Sbjct: 21  TVAPRVSGYVTEVLVNDNQYVEAGSVIAKLDARPYRAAYDQSLASVASKQASVEKIQASL 80

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN-----YGISSVYRSLKMKLTRMR 172
                     +   +S +        +Y      V         ++ + ++       + 
Sbjct: 81  TQQAQNIKQAQALVQSAKADADHAAHEYSRHAPLVARNIESGESLADLKKTRDSSAAELV 140

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           +        + + S+L+A L+  + DL   +   E+  +S  D
Sbjct: 141 ADQAAAHSAQLQVSVLQADLAQAKADLLEAQANAEQARISLTD 183


>gi|295095903|emb|CBK84993.1| Multidrug resistance efflux pump [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 360

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 87/302 (28%), Gaps = 29/302 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V + A   + E LL    + +          ++    +L   L + +S        E   
Sbjct: 77  VQDFAQVKKGELLLQIDDRIYRQRVHQAEAQLAMKIAALNNNLQQRKSAEAVIAKNEAAL 136

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              RA     Q DL  +K L    ++S        R    +     +   +       + 
Sbjct: 137 KNARAQSLKTQADLKRVKELTADGSLSI-------RERDSALASAAQGSADIDQAKATLE 189

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               +      N            +    +  + L + +   +   I++P  G +     
Sbjct: 190 MSRQDLQTVIVNRGS--------LEADVENAKAALELAQIDLQNTRIVAPRDGQLGQIAV 241

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                Y      L  +VP        A +   Q+ +++ G           D   K ++ 
Sbjct: 242 R-LGAYVTAGTHLTTLVPPQHWVI--ANIKETQLANLRVGQPVKFTVDALND---KAYQG 295

Query: 366 IIEKIDPII----SQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTA 417
            +E I P      S    +  T  + ++     ++I  L   +    LR G   +V    
Sbjct: 296 RVESISPATGVEFSAITPDNATGNFVKIAQRIPVRIEVLGEPEEYRLLRPGMSVQVTIDT 355

Query: 418 KN 419
           + 
Sbjct: 356 RE 357


>gi|114571154|ref|YP_757834.1| RND family efflux transporter MFP subunit [Maricaulis maris MCS10]
 gi|114341616|gb|ABI66896.1| efflux transporter, RND family, MFP subunit [Maricaulis maris
           MCS10]
          Length = 493

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 86/271 (31%), Gaps = 21/271 (7%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            +  I S+Y      +   + I     +             +       ++      AV+
Sbjct: 66  LSGQIESLYADFNDSVEAGQVIAQLNPETYETRIREAEANRATAAATLALQRANRLTAVA 125

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
                QQE    ++  + R    +         +   +ANL  ++        +   Q  
Sbjct: 126 NARSAQQEYDRVRALFD-RGISAQAALDNALTAQEAAQANLAVSD------AQIRNAQAV 178

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKLTYI 330
            A   + L  ++   E+ TI +PI G +V          A    +  L  I        I
Sbjct: 179 LAQRDATLEGVQIDLERTTIRAPINGIVVDRAVDEGQTVAASLSAPTLFTIAQDLGQVQI 238

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A+V    I  + +G   +     Y   +  +   ++E+I  +  Q  +N+ T   Y V+
Sbjct: 239 DAQVDEADIGQIAEGQPVSFTVDAY---QGLELTGVVEQI-RLAPQTLSNVVT---YTVV 291

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           +     + ++    L  G  A +       T
Sbjct: 292 V-----SAANPGQRLLPGMTANMDIITGERT 317


>gi|94968857|ref|YP_590905.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
 gi|94550907|gb|ABF40831.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
          Length = 449

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/381 (11%), Positives = 113/381 (29%), Gaps = 91/381 (23%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  ++S++G++    +     +P S  ++K  V+ G  + +G  LLT +D          
Sbjct: 85  LTATISTNGKVEPVADFQAH-APISTTVQKIYVKAGDHVKKGQILLTLDD---------- 133

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
                                                          +  ++ F    ++
Sbjct: 134 -------------------------------------------ASVRAQSARAFAQLKTA 150

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                 ++    R   +NR   +++    +A   + Q++L  ++ L +  A S  ++   
Sbjct: 151 QAEQAAVQNGGSREEVINR---QSQLVKAQADRDAAQRNLAALQKLLQSGAASPAEVQAA 207

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E  +  S   +                      L+     +   +D  + Q +  +  + 
Sbjct: 208 ENQLRVSEAAVSS--------------------LQQTGTQRYSPQDATRVQASEKEAQAT 247

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
               + T  Q  I S + GT+          +      L+  V   K   +RA +    +
Sbjct: 248 YDAAQATLGQTNIRSDVEGTVYSLPVR-EGTFVNPGD-LLVGVAELKTIEVRAFIDEPDL 305

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             + +G    V +          +   + ++   +  +   +      E+++ +      
Sbjct: 306 GRLSQGEQVNVSWDALPGRT---WTGTVTRVPSTVVTRGTRMVG----EILVNVP----- 353

Query: 400 DNNIELRNGFPAEVLFTAKNT 420
           +++ +L       V       
Sbjct: 354 NDDGKLLPNINVTVSIITAQK 374


>gi|307727582|ref|YP_003910795.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1003]
 gi|307588107|gb|ADN61504.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1003]
          Length = 402

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/299 (11%), Positives = 76/299 (25%), Gaps = 53/299 (17%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    SGI++     +   + +G  L+  +D +    ++  +  +      +    +   
Sbjct: 81  ITPSVSGIVRSVAAVDTQHVRKGDVLVVIDDTDAKLALEQAEAEVGRAERRVRGYLATDA 140

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L  + D    A E+R                                            
Sbjct: 141 GLAAQVDA-RAADEAR-------------------------------------------- 155

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             +  + +  +A       DL   + L    +VS  +L+  +     +   L        
Sbjct: 156 --MNAQIASAKADFDRAAIDLKRREALAHSGSVSGEELSNAQTSFASAQAALMAARAAAL 213

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                        +     ++                  +K        E+  + +P+ G
Sbjct: 214 QAQASRAAAVGSQDANKVLFVDTTV----DTNPEVRLARAKRDQARVDLERTVLRAPVDG 269

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
            +   Q        +    L+ +VP     ++ A     Q+  V+ G    +    Y  
Sbjct: 270 VVARRQV-QVGQRVEPGASLLSVVPVDS-LHVDANFKEVQLDKVRIGQPVELTSDLYGS 326


>gi|298486289|ref|ZP_07004352.1| HlyD family secretion protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298159296|gb|EFI00354.1| HlyD family secretion protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 424

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 46/388 (11%), Positives = 102/388 (26%), Gaps = 48/388 (12%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PIE + ++      +     I    SG + +  V++   +  G  L+  +D        
Sbjct: 64  SPIESTENAQ----VKGQTTLIGPQLSGYVYEVPVQDFQFVKAGDLLVRLDD-------- 111

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                 +                                                     
Sbjct: 112 ---RIYRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 168

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                           I   + +L+N  +  R   +    DL   + L    +VS+++L 
Sbjct: 169 XXXXXXXXXXXXXXXXIGQRQAELQNSIAQSRKSAA----DLRRNQALVTDGSVSKSEL- 223

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                V ++          +   +  I              L+ +  +    + + A+  
Sbjct: 224 ----DVTRAADAQANAAVAEARAVLQIA----------REDLQTVIVNRGSLEASVANAQ 269

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + + +     +   I++P  G +          Y      LM +VP  +     A +   
Sbjct: 270 AAIELARIDLDNTRIVAPRDGQLGQIGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKET 326

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKI 393
           Q+ HV+ G   +            +    +++I P    +      +  T  + ++  +I
Sbjct: 327 QMAHVRLGQPVSFTVDALDGH---EMHGHVQRISPAAGSEFSLLPADNATGNFVKISQRI 383

Query: 394 TDLAFSDNNIE----LRNGFPAEVLFTA 417
                 D +      LR G    V    
Sbjct: 384 PVRIVVDADQPMLEHLRPGMSVVVSIDT 411


>gi|260223184|emb|CBA33493.1| hypothetical protein Csp_B19330 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 425

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/333 (12%), Positives = 98/333 (29%), Gaps = 42/333 (12%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC------ 149
           ++ +  +I           S      ++  V  +      + L+DF  +  +        
Sbjct: 32  VEYRTAAITRGNLQATVAASGAVSPVSQVSVGTQVSGQIRDVLVDFNSEVKAGQLIAQID 91

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + F Y + S    +      + +   N L  + + S  +  L   ++D    ++L +K 
Sbjct: 92  PETFEYRVRSAQADVDAARAAVLTAQANALAAQTQVSRAQVDLDEARRDSDRKQSLADKQ 151

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            ++ ++ ++   +V  S   ++    +       +                         
Sbjct: 152 FIATSEADKARALVNTSMEAMKSVQAQVGVAQAQVKT----------------------A 189

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKL 327
           Q   A   + L        +  I SP+ G ++          A   Q   L  I  +   
Sbjct: 190 QANVAQREAALAQARIDLARTRITSPVNGIVIKRTIERGQTVASSLQAPELFVIAQNLSD 249

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + A +    +  ++ G  A+     +       F+  I ++    +   N +     Y
Sbjct: 250 MQVEAAIDESDVGRLQTGQKASFTVDAFPGQT---FEGSIRQVRKAATNVANVVT----Y 302

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             I+      F +   +L  G  A V       
Sbjct: 303 VAIV-----GFKNEGGKLLPGMTANVRVITDQR 330



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 76/231 (32%), Gaps = 6/231 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             ++ +V++SG +     V  + +  SG I+   V+  S++  G  +   +       + 
Sbjct: 42  GNLQATVAASGAVSPVSQV-SVGTQVSGQIRDVLVDFNSEVKAGQLIAQIDPETFEYRVR 100

Query: 98  -----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                +       L    +   +       + D+ E   +S  +Q L       ++ +  
Sbjct: 101 SAQADVDAARAAVLTAQANALAAQTQVSRAQVDLDEARRDSDRKQSLADKQFIATSEADK 160

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               +++   ++K    ++          +   +   A L+  + DL   +     N + 
Sbjct: 161 ARALVNTSMEAMKSVQAQVGVAQAQVKTAQANVAQREAALAQARIDLARTRITSPVNGIV 220

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                ++ + V  S       +  Q      +    DE+++      ++ S
Sbjct: 221 IKRTIERGQTVASSLQAPELFVIAQNLSDMQVEAAIDESDVGRLQTGQKAS 271


>gi|116620775|ref|YP_822931.1| RND family efflux transporter MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116223937|gb|ABJ82646.1| efflux transporter, RND family, MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 446

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 60/436 (13%), Positives = 122/436 (27%), Gaps = 117/436 (26%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLP----------------IEISVSSSGEI 50
           K           R  +  I+  + L  W +L                  I  + +  G I
Sbjct: 14  KRRSTEPSRWAARWIVTGIVVFLLLGAWRVLSSDKFNSAPEVEVTRVRSISAASAPEGVI 73

Query: 51  ------LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
                 +   + +E+ +   G +K   V+ G  + +G  L+  ED E    +   K ++ 
Sbjct: 74  LNATGYIVAAHKIEVAAKVVGKVKWIGVDKGDHVTEGQVLVRLEDDEYQAQLLQAKGNLV 133

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           +L+  +                 E    SR E++   L   H+  S + N  ++      
Sbjct: 134 SLQAKLA----------------EATNGSRPEEVAAALANVHTAESDLDNAKVT------ 171

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                                             L   + L +   V+Q  ++  +    
Sbjct: 172 ----------------------------------LDRNRLLLKNGVVAQQVVDDAQ---- 193

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                         N L  +  L     L      +E    ++  +         L   E
Sbjct: 194 ----------ARYDNALHRVASLQKSFELVKLGPRQE---QIDSLRGQVDQARGALVYAE 240

Query: 285 KTREQKTILSPIAGTIVYNQS-----FSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPK 337
                  I +P+ GTI+          ++S    +      +V  +      +   +   
Sbjct: 241 TNLANTIIRAPVTGTILERAVEKGEFVTTSFVGDRGAK-GYVVSLADLNDLEVELDIAQN 299

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
               +  G    V    + D +       I++I P  ++Q   +Q      + +K+    
Sbjct: 300 DFAKLHAGQHGAVTTDAFPDRKY---DGFIKEISPEANRQKATVQ------IKVKV---- 346

Query: 398 FSDNNIELRNGFPAEV 413
            +  +  LR    A V
Sbjct: 347 -AQPDNYLRPEMNASV 361


>gi|189467762|ref|ZP_03016547.1| hypothetical protein BACINT_04154 [Bacteroides intestinalis DSM
           17393]
 gi|189436026|gb|EDV05011.1| hypothetical protein BACINT_04154 [Bacteroides intestinalis DSM
           17393]
          Length = 355

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 112/359 (31%), Gaps = 85/359 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+ +      +  G  LL  ++           + +K+    +   K A D L++ 
Sbjct: 66  SGYIKEVRFTEHQPVHAGDTLLILDN-------REYLIKVKDAEAALMDAKGAKDVLSS- 117

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                                          +++  +N    E 
Sbjct: 118 ----------------------------------------------GIQTSQVNVAIQEA 131

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +  +A L   ++D     NL  + +VSQ    Q +     +    +  + +++     
Sbjct: 132 NIAETKAKLWQQEQDYRRYANLLAEESVSQQQYEQVKTAYEATKARYQALLQQKEAAKSQ 191

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            +E   ++    AN L++                + L + +       + +P  G +  +
Sbjct: 192 YSETSKKSTGIKANILRK---------------EADLDMAKLNLSYTIVTAPYDGYM-GH 235

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     + Q  Q +  ++  +   +I A     QI H+  G    ++   +   R   F
Sbjct: 236 RTLEPGQFVQAGQTISYLIRGNDK-WITANYKETQISHIYIGQKVRIKVDAF---RGHIF 291

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +  I           P  +   N ++ Q+   V +++ D +  +    LR G   E
Sbjct: 292 HGTVTAISEATGSKYALVPTDNSAGNFVKVQQRIPVRIELDDASPEEMK-SLRAGMMVE 349


>gi|160938103|ref|ZP_02085459.1| hypothetical protein CLOBOL_02997 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438907|gb|EDP16663.1| hypothetical protein CLOBOL_02997 [Clostridium bolteae ATCC
           BAA-613]
          Length = 354

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 110/363 (30%), Gaps = 75/363 (20%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I +   G IK   VE G  + +G  L+  +                              
Sbjct: 57  INALTGGQIKDVLVEEGDLVTKGQELVRLDS----------------------------- 87

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                 D L    E  +  L      Y S  +      +  +            ++ + +
Sbjct: 88  ------DTLMAQREQAQAALAQAQAAYQSLLNGATEEQMKQL----------QLAVQIAQ 131

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            +LEN  +    + + +Q+ L     L    AVSQ+ ++ Q+  +  +   L  +    +
Sbjct: 132 ANLENAQAAYTRMDADYQRTLA----LVPAGAVSQSSVDAQKAALASAKAALDSSRSNLE 187

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                ++E  + A  E           + Q Q       + L  ++ T ++  + SP+ G
Sbjct: 188 ISQSKLSEAQNGATPE----------QIAQAQAGVDQAKAALKQIDTTLDKCVLTSPVDG 237

Query: 299 TIVYNQSFSSSNYAQQSQP---LMKI-VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
            +      S  +      P   +  I  P+        K+       VK      +    
Sbjct: 238 LVTTVNVKS-GDVVSSGLPSVVVADIYTPYITCDVDEMKLP-----RVKLDQEVDISLAA 291

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI---LKITDLAFSDNNIELRNGFPA 411
                    K  + +I+            +  ++++   +K+T    +    ELR+G  A
Sbjct: 292 LGKDTY---KGKVVRINKEADFATKKASNEADWDILTYGIKVTFENLTGLQDELRSGMTA 348

Query: 412 EVL 414
            V 
Sbjct: 349 YVD 351


>gi|183598089|ref|ZP_02959582.1| hypothetical protein PROSTU_01452 [Providencia stuartii ATCC 25827]
 gi|188020246|gb|EDU58286.1| hypothetical protein PROSTU_01452 [Providencia stuartii ATCC 25827]
          Length = 393

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 81/281 (28%), Gaps = 34/281 (12%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               +     +     +L   + +     +N    +    + R+ L S Q DL   + L 
Sbjct: 92  ELDPRDAQLALEKAKTTLANSVRQTHQQIVNSRQYQANIDMKRSELISLQNDLKRREVLG 151

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             N + + +L      V  +   L   I +       I +   E          E+    
Sbjct: 152 SSNLIGKEELQHAREAVVSAKAALEVAIEQLNANKAIILDTPLEKQPAVEAAATEVRNTW 211

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                                ++  I+SP+ G +   +S    +    S PLM IVP   
Sbjct: 212 L------------------ALQRTKIVSPVDGYVSR-RSVQVGSQITTSTPLMAIVPSEG 252

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQ 376
             +I A     Q+  ++ G    V    Y       F   +  +D          P  + 
Sbjct: 253 -MWIDANFKETQLADMRIGQPVKVTTDFYGKNI--VFNGTVAGLDMGTGSAFSLLPAQNA 309

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
             N ++  +   V + +         + +  G   EV    
Sbjct: 310 TGNWIKVVQRLPVRIVLDPAQLEQYPLRI--GLSTEVTVDT 348


>gi|170750012|ref|YP_001756272.1| secretion protein HlyD family protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656534|gb|ACB25589.1| secretion protein HlyD family protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 422

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 83/281 (29%), Gaps = 28/281 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L     + +          +++    +K    ++++ Y N    + + +   A L   
Sbjct: 154 QILFQVFQRDYDIALDQAKAQVAADEAGIKNIDAQIQAQYANIDVSKAQVATAEAALKFA 213

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+D    K+L E+ + S          + +    ++          + +  L  +     
Sbjct: 214 QEDAARYKDLAERGSGSVQQSQSATSTLQQRQAAVQSANASVVAAQKQVGSLQAQK---- 269

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                         Q     + +++   E      T+ +   G IV          AQ  
Sbjct: 270 -----------ASTQAQLGRDRAQVEQAELNLGYTTVRAVQGGRIVRLTG-GVGQLAQAG 317

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q L   VP     ++ A     QI  +++G    +    Y   +    +  +  + P   
Sbjct: 318 QTLAMFVPDD--IWVTANFKETQITDMRQGQPVDIEIDAYPGRK---IQGTVASVQPGSG 372

Query: 376 QQ----DNNLQTQEYYEVILKITDLAFSDN---NIELRNGF 409
                      T  Y +V  +I       N   ++ +  G 
Sbjct: 373 TAFSLLPAQNATGNYVKVTQRIPVKIVVKNWPTDVSIGPGM 413



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 86/270 (31%), Gaps = 15/270 (5%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWS-ILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           L+R+  A L     +  + +     W   + P E +  +      +   + I+    G +
Sbjct: 84  LRRHPVAFLLGGLAVVALCVGVFFYWLLYMHPYESTDDA----FVDARSISIQPKVGGYL 139

Query: 68  KKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
               V +   +  G  L             +    +   +  IKN+   I  + + +D  
Sbjct: 140 VDVPVTDNQHVEAGQILFQVFQRDYDIALDQAKAQVAADEAGIKNIDAQIQAQYANIDVS 199

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +    E A +  +E    +          V      S   +L+ +   ++S   + + 
Sbjct: 200 KAQVATAEAALKFAQEDAARYKDLAERGSGSVQQSQ--SATSTLQQRQAAVQSANASVVA 257

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            + +   L+A  +S Q  L   +   E+  ++         +     + L   + +    
Sbjct: 258 AQKQVGSLQAQKASTQAQLGRDRAQVEQAELNLG-YTTVRAVQGGRIVRLTGGVGQLAQA 316

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQ 270
            + +     +     AN+ +    D+ Q Q
Sbjct: 317 GQTLAMFVPDDIWVTANFKETQITDMRQGQ 346


>gi|312897752|ref|ZP_07757168.1| efflux transporter, RND family, MFP subunit [Megasphaera
           micronuciformis F0359]
 gi|310621136|gb|EFQ04680.1| efflux transporter, RND family, MFP subunit [Megasphaera
           micronuciformis F0359]
          Length = 377

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 68/212 (32%), Gaps = 23/212 (10%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI----SRDLEQNQRTFADEMSKL 280
           +    L    +  K           +   E A  L E      +DL+  Q  +    S L
Sbjct: 95  QVVATLDGKDYAAKKDQAQYKLTNAQLKYERAKALYEAGAGSKQDLDNAQFEYDTAASSL 154

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS----QPLMKIVPHSKLTYIRAKVTP 336
           +  E    +  I +P++G +V     +    A Q       +M+I        I AKV  
Sbjct: 155 SEAESDVAETVITAPMSGVVVGEPK-TPGTMAVQGNSSPTVIMRIADTGTKQII-AKVDE 212

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--------YYE 388
             I  +K G  AT     Y +       + I + D   S    N  +          YY 
Sbjct: 213 TDIGKIKVGQDATFTVDSYTNKTFTAHVSKISQTDTTYSWDTTNTTSSASASSASVIYYY 272

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           V L + D      N +LR G  A V  +    
Sbjct: 273 VTLDVDDP-----NDDLRLGMTARVDISTSQK 299



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 1/91 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+ S+S++G I    N VE+    +  I    V+   ++ +G  + T +  +     D  
Sbjct: 54  IKSSISATGVISPV-NSVEVSPKITARISTVAVKENDRVEKGQVVATLDGKDYAAKKDQA 112

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +  + N +   +  K+  +        L+ A
Sbjct: 113 QYKLTNAQLKYERAKALYEAGAGSKQDLDNA 143


>gi|296104359|ref|YP_003614505.1| efflux pump membrane protein [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295058818|gb|ADF63556.1| efflux pump membrane protein [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 390

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 89/277 (32%), Gaps = 34/277 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + + R + +N   L+    + +  L+  Q DL     L   N + +
Sbjct: 98  QQAFEKAQTALASSVRQTRQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGTANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVASAQAQLDVAIQQYNANQAMILGTSLENQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         ++  I+SP+ G +   +S         + PLM +VP     ++ A 
Sbjct: 212 ------------ALQRTKIVSPMTGYVSR-RSVQPGAQISPTTPLMAVVPADN-LWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ H++ G TATV    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQLAHMRIGQTATVISDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +   V +++     +D+ + +  G    V     N 
Sbjct: 316 VQRLPVRIELDPKQLADHPLRI--GLSTLVTVDTANR 350



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 54/160 (33%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  + ++ +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVQKGDVLVTLDPTDAQQAFEKAQTALASSVRQTR 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L     LG  +    +   +   +V  +      
Sbjct: 117 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGTANLIGREELQHARDAVASAQAQLDV 176

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+       LEN+ ++ +A        L + + 
Sbjct: 177 AIQQYNANQAMILGTSLENQPAVQQAATEVRNAWLALQRT 216


>gi|222055202|ref|YP_002537564.1| efflux transporter, RND family, MFP subunit [Geobacter sp. FRC-32]
 gi|221564491|gb|ACM20463.1| efflux transporter, RND family, MFP subunit [Geobacter sp. FRC-32]
          Length = 397

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 69/216 (31%), Gaps = 22/216 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE-LYDEANLEFANYL-KEISRDLEQN 269
           S+ +    +  + ++  E+ +     +   + I + +  ++  + A+   K+    ++  
Sbjct: 99  SRGNYISAQANLDRAKAEMVDARRALERNRQLIKDGILAQSEFDTADTRYKQALAAVKAA 158

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSK 326
           + + +      +  +   +  TI SP+ G +V             S     L  I     
Sbjct: 159 EGSISQTRGSYSQAQTNLKYATITSPVDGIVVSRNVD-VGQTVAASFQTPTLFTIAQDLT 217

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQ 384
              I   V    I  V  G   T     Y           + +I   PII+Q        
Sbjct: 218 NMKIDTSVDEADISRVMVGQPVTFTVDSYPKNNFP---GKVTQIRNAPIINQNVVT---- 270

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             Y V++ +      +  ++L+ G  A V       
Sbjct: 271 --YTVVIGVD-----NKELKLKPGMTANVTIETARK 299



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/114 (10%), Positives = 39/114 (34%), Gaps = 2/114 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I +  V+  S + +G  +   +    +  ++  + +  + + ++D  ++  + ++ +
Sbjct: 64  SGTISRLFVDFNSPVKKGQAIAQIDPALFSARVEESRGNYISAQANLD--RAKAEMVDAR 121

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +       ++  L         T  K     + +   S+            N
Sbjct: 122 RALERNRQLIKDGILAQSEFDTADTRYKQALAAVKAAEGSISQTRGSYSQAQTN 175


>gi|227823476|ref|YP_002827449.1| putative multidrug resistance protein [Sinorhizobium fredii NGR234]
 gi|227342478|gb|ACP26696.1| putative multidrug resistance protein [Sinorhizobium fredii NGR234]
          Length = 404

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 77/254 (30%), Gaps = 16/254 (6%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
             L     + + +  +A LS  +      +       ++Q   +  +   + +      +
Sbjct: 146 QKLALSRFDAQIAGAQASLSQAEAQKNAFEAAVRGAELTQKRASDLQSKAFGTDAS--RD 203

Query: 234 IHEQKNMLRHINELYDEANLEFANY-LKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
             +        N +  EAN+  A   +  +     +++ T            +      +
Sbjct: 204 SAQVALDQARANLVGAEANIASAKANITVLEAQRAESESTIRSLGLSRDKANRDLGFTVL 263

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G I  N +    +     Q L  +VP     YI A     QI H+  G    V  
Sbjct: 264 KAPYDGVI-GNVAVQVGDLVAAGQRLAALVPTD-QLYIDANFKETQIAHLVPGSKVQVHV 321

Query: 353 PHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             Y +      +  +  I P          ++      T+    V ++IT  A +     
Sbjct: 322 DAYDEH---AIEGTVASISPASGSVFSLLPAENATGNFTKVIQRVPVRITLPADALAKGN 378

Query: 405 LRNGFPAEVLFTAK 418
           LR G    V    +
Sbjct: 379 LRAGLSVVVDVDTR 392



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 82/262 (31%), Gaps = 19/262 (7%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-- 110
           E ++  I    SG + +  V     +  G PL+T +D +     +  +  I   +  +  
Sbjct: 93  EGDIATISPKVSGYVARVDVVANQHLKAGDPLVTLDDGDYRIAAEQAEAQIATQKLALSR 152

Query: 111 -DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLKMK 167
            D + +      ++ +  + AFE+          +     SK F  +    S   +L   
Sbjct: 153 FDAQIAGAQASLSQAEAQKNAFEAAVRGAELTQKRASDLQSKAFGTDASRDSAQVALDQA 212

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              +     N    +   ++L A  +  +  +  +  L    A         +       
Sbjct: 213 RANLVGAEANIASAKANITVLEAQRAESESTIRSL-GLSRDKANRDLGFTVLKAPYDGVI 271

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             +   + +     + +  L     L        I  + ++ Q       SK+ +     
Sbjct: 272 GNVAVQVGDLVAAGQRLAALVPTDQL-------YIDANFKETQIAHLVPGSKVQVHVDAY 324

Query: 288 EQKTI------LSPIAGTIVYN 303
           ++  I      +SP +G++   
Sbjct: 325 DEHAIEGTVASISPASGSVFSL 346


>gi|146311603|ref|YP_001176677.1| secretion protein HlyD family protein [Enterobacter sp. 638]
 gi|145318479|gb|ABP60626.1| secretion protein HlyD family protein [Enterobacter sp. 638]
          Length = 360

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 87/280 (31%), Gaps = 28/280 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +++   +      L MK+  + +    R   E       A L          KN   +N 
Sbjct: 95  RIYRQRVHQAEAQLAMKIAALNNNLQQRKSAEAVIVRNDAAL----------KNARAQNL 144

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN- 269
            +Q DL + + +    +L +RE      +     +   D+A        +++   +    
Sbjct: 145 KTQADLKRVKDLTADGSLSIRERDAALASA-AQGSADIDQAKATLEMSRQDLQTVIVNRG 203

Query: 270 --QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +       + L + +   +   I +P  G +          Y      L  +VP    
Sbjct: 204 ALEADVESAKAALELAQIDLQNTRITAPRDGQLGQIAVR-LGAYVTAGTHLTTLVPPQHW 262

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQT 383
               A +   Q+  ++ G               K ++  +E I P      S    +  T
Sbjct: 263 VI--ANIKETQLADLRVGQPVKFTVDALN---GKAYQGRVESISPATGVEFSAITPDNAT 317

Query: 384 QEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             + ++     ++I  L   + +  LR G   +V    + 
Sbjct: 318 GNFVKIAQRIPVRIEVLGKPEASALLRPGMSVQVSIDTRE 357


>gi|15966652|ref|NP_387005.1| putative multidrug efflux system protein [Sinorhizobium meliloti
           1021]
 gi|15075924|emb|CAC47478.1| Multidrug resistance efflux system [Sinorhizobium meliloti 1021]
          Length = 382

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 72/253 (28%), Gaps = 14/253 (5%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
             L     + + S  +A L+  +     ++       ++Q   ++ +   + +       
Sbjct: 124 QKLALSRFDAQISGAKASLAQSEAQKKALEATVRGAELAQKRASELQSKSFGTDASRDSA 183

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                    ++           AN    +     + + T           ++      + 
Sbjct: 184 QVALDQARANLAGAEANIAAAKANITV-LEAQQMEAESTIRSLELARDKADRDLGFTILK 242

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G I  N +    +     Q L  +VP     YI A     QI H+  G    +   
Sbjct: 243 APYDGVI-GNVAVQVGDLVSAGQRLAALVPTD-QLYIDANFKETQIAHLVPGSKVEIHVD 300

Query: 354 HYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            Y D      +  +  I P          ++      T+    V ++IT  A       L
Sbjct: 301 AYEDH---PIEGTVASISPASGSVFSLLPAENATGNFTKVIQRVPVRITLPADVLAEGHL 357

Query: 406 RNGFPAEVLFTAK 418
           R G    V    +
Sbjct: 358 RAGLSVVVDVDTR 370



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 65/216 (30%), Gaps = 6/216 (2%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-- 110
           E ++  I    SG + K  V     +  G PL+T +D +     +  +  I   +  +  
Sbjct: 71  EGDIATISPKVSGYVAKVDVVANQHVKAGDPLVTLDDGDYRIAAEQAEAQIATQKLALSR 130

Query: 111 -DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLKMK 167
            D + S       + +  +KA E+          +     SK F  +    S   +L   
Sbjct: 131 FDAQISGAKASLAQSEAQKKALEATVRGAELAQKRASELQSKSFGTDASRDSAQVALDQA 190

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              +     N    +   ++L A     +  +  ++ L    A         +       
Sbjct: 191 RANLAGAEANIAAAKANITVLEAQQMEAESTIRSLE-LARDKADRDLGFTILKAPYDGVI 249

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             +   + +  +  + +  L     L      KE  
Sbjct: 250 GNVAVQVGDLVSAGQRLAALVPTDQLYIDANFKETQ 285


>gi|115524105|ref|YP_781016.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           BisA53]
 gi|115518052|gb|ABJ06036.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           BisA53]
          Length = 401

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 85/278 (30%), Gaps = 32/278 (11%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 I++   ++     ++ +        + +     A  +    D    + L  K  
Sbjct: 145 DAARAKIATQQATIARIGRQVIAQQSAAEQAKAQVVSAEAAANRAALDFDRQQALSTKGF 204

Query: 211 VSQN--DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            S+   +++Q  R    + ++  +  +        + +                     +
Sbjct: 205 ASRATFEVSQAGRDQGAAAVQAAQAAYNASRDNVEVTKAQQ-----------------AE 247

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +    +  + L   E+  +   + +PI G I  N+  ++ +Y Q  Q L  IVP     
Sbjct: 248 ARAQLEELKASLAKAERDLDFAAVRAPIDG-IFANRLVNAGDYVQAGQRLANIVPLDG-V 305

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNN 380
           YI A     Q++ +K G    +    Y+       +  +E + P                
Sbjct: 306 YIDANFKETQLRRIKPGQPVAISVDAYSGR---SIEGTVESLSPAAGAVFTLLPPDNATG 362

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             T+    V +++   A       LR G    V    K
Sbjct: 363 NFTKIVQRVPVRVKVPADVARENLLRAGMSVYVSVNTK 400



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 46/152 (30%), Gaps = 12/152 (7%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI------------DT 112
           G +      + +Q+  G  L   +D +    +D  +  I   +  I              
Sbjct: 113 GHVAAIVPGDNAQVRAGDVLFRIDDGDYRIAVDAARAKIATQQATIARIGRQVIAQQSAA 172

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E++    ++ +      A +   +Q L   G       +V   G      +++       
Sbjct: 173 EQAKAQVVSAEAAANRAALDFDRQQALSTKGFASRATFEVSQAGRDQGAAAVQAAQAAYN 232

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           +   N    + + +  RA L   +  L   + 
Sbjct: 233 ASRDNVEVTKAQQAEARAQLEELKASLAKAER 264


>gi|255021910|ref|ZP_05293920.1| secretion protein HlyD family protein [Acidithiobacillus caldus
           ATCC 51756]
 gi|254968734|gb|EET26286.1| secretion protein HlyD family protein [Acidithiobacillus caldus
           ATCC 51756]
          Length = 349

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 94/304 (30%), Gaps = 33/304 (10%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             S         + +   +L   + ++R  +    + + K    +A L+  + DL   + 
Sbjct: 47  LASLQGDRSLLALQASEAALGRTVRQLRQEFAAVQETQAKLRAQQAQLTKLRDDLQRYRG 106

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
                AV+   +    + V     E+     + +     +     + N            
Sbjct: 107 AQASGAVATIQIADTTQDVNALQAEIAATAAKLQAAQALVEGTTLQNNP----------- 155

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
              Q +   AD   +         ++ + +PI+G +V   ++         + L  IVP 
Sbjct: 156 ---QVRAAVADLERRYI----DWARRDLRAPISGFVVQRSAY-PGLMIHPGERLFTIVPL 207

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR--EKKFKAIIEKIDPIISQQDNNLQ 382
             L  + A V   Q+ H++ G    +   +Y D        + ++       +       
Sbjct: 208 DDLWVV-ANVKETQMAHLRPGQPVRLESYYYGDRVIFHGTVQGLLPGAGSAFAVLPPENA 266

Query: 383 TQEYY----EVILKITDLAFSDNNIELRNG--FPAEVLF-TAKNTTLAQEIIHPITDNWP 435
           T  Y      V ++I+          LR G    A +         + +    PIT    
Sbjct: 267 TGNYIHIVERVPIRISLRRAEIRRYPLRPGLSMIAHIDIHQEGPKNVLE----PITTTPT 322

Query: 436 KIFE 439
           + +E
Sbjct: 323 RGYE 326



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 37/103 (35%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E NV  +++  +G I++  VEN   +  GT L + +   +   +   + ++      + 
Sbjct: 15  VEGNVTPVQAQSAGTIRRVYVENTEYVRAGTILASLQGDRSLLALQASEAALGRTVRQLR 74

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            E +A+     K    +       + L  + G   S       
Sbjct: 75  QEFAAVQETQAKLRAQQAQLTKLRDDLQRYRGAQASGAVATIQ 117


>gi|39936605|ref|NP_948881.1| multidrug resistance efflux pump [Rhodopseudomonas palustris
           CGA009]
 gi|39650461|emb|CAE28984.1| possible multidrug resistance efflux pump [Rhodopseudomonas
           palustris CGA009]
          Length = 422

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 115/378 (30%), Gaps = 84/378 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N   + +  SG I      + S++  G  +   +D +        K+++ + R  I 
Sbjct: 117 VRANNTTLGARVSGHIAAILPRDNSEVKAGDVVFRIDDGDY-------KIAVDSARAKIA 169

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T+++ +  +                              +      S+V ++     +  
Sbjct: 170 TQEATIARI-----------------------------GRQIVAQQSAVEQAQAQLASAE 200

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +     LD + + +L     +S        + +FE +  S++           +    R
Sbjct: 201 AAAKRADLDFDRQQALSTKGFAS--------RAVFETSQASRDQTVASVAAAKAAYDAAR 252

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +N+   K                             + +    +  S L   E+      
Sbjct: 253 DNVEVTKAQQ-------------------------AEARAQLIELQSALAKAERDLAFTN 287

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P+ G +  N+  +  +Y    Q L  IVP     YI A     Q++ +K G    + 
Sbjct: 288 VRAPVTG-VFSNRLVNVGDYINAGQRLANIVPLDG-VYIDANFKETQLRRLKPGQKVGIS 345

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE--- 404
              ++  +    +  ++ + P   Q       +  T  + +++ ++        ++    
Sbjct: 346 VDAFSSRK---IEGTVDSLAPAAGQVFTLLPPDNATGNFTKIVQRVPVRIRVPADVAREG 402

Query: 405 -LRNGFP--AEVLFTAKN 419
            LR G     +V      
Sbjct: 403 LLRAGMSVYVDVDTRTGE 420


>gi|224538641|ref|ZP_03679180.1| hypothetical protein BACCELL_03535 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519735|gb|EEF88840.1| hypothetical protein BACCELL_03535 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 355

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 51/359 (14%), Positives = 110/359 (30%), Gaps = 85/359 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+ +      +  G  LL  ++           + +K+    +   K   D L++ 
Sbjct: 66  SGYIKEVRFTEHQPVHAGDTLLILDN-------REYLIKVKDAEAALMDAKGTKDVLSS- 117

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                                          +++  +N    E 
Sbjct: 118 ----------------------------------------------GIQTSQVNVAIQEA 131

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +  +A L   ++D     NL  + +VSQ    Q +     +    +  + +++     
Sbjct: 132 NIAETKAKLWQQEQDYRRYANLLAEESVSQQQYEQVKTAYEATQARYQALLQQKEAAKSQ 191

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            +E   ++    AN L++                + L + +       + +P  G +   
Sbjct: 192 YSETSKKSTGIEANILRK---------------EADLDMAKLNLSYTIVTAPYDGYM-GR 235

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     + Q  Q +  +V  +   +I A     QI H+  G    ++   +   RE  F
Sbjct: 236 RTLEPGQFVQAGQTISYLVRGNDK-WITANYKETQISHIYIGQKVRIKVDAF---REHIF 291

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              +  I           P  +   N ++ Q+   V +++ D    +    LR G   E
Sbjct: 292 HGTVTAISEATGSKYALVPTDNSAGNFVKVQQRIPVRIELDDATPEEMK-SLRAGMMVE 349


>gi|225872943|ref|YP_002754400.1| transporter, MFP family [Acidobacterium capsulatum ATCC 51196]
 gi|225792832|gb|ACO32922.1| transporter, MFP family [Acidobacterium capsulatum ATCC 51196]
          Length = 383

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 53/411 (12%), Positives = 121/411 (29%), Gaps = 55/411 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            +  +   + + +     W+     +  V  + +     N + + +  SG +K   V + 
Sbjct: 9   PVAVLATAAFLILAIRGHWTSW-QSDAVVQKTDDAYVTANQIPLSTRISGTVKAVDVHDY 67

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G PL+  +D +   ++   + +I   +  +   ++A    + +  V   A    +
Sbjct: 68  QGVRAGEPLIVLDDADYQAVVSEAQAAIAAAQAELAANQAAKHAADAQ--VQSAASGIAQ 125

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q      +     ++      +S YR +        +               +A L + 
Sbjct: 126 AQAAARAAQDAIAAAQAQADDAASEYRRVHALYANQAATQEQYDHALAARESTQAALQAK 185

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q      +        ++    +Q   +      L   I  +K                 
Sbjct: 186 QAQAAQAQAAIASGETARAAALEQRAGLNAKDRALEAQIAAKK----------------- 228

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                 ++L + +      TI +P +G I   Q           
Sbjct: 229 ----------------------AQLIVAQVNLSYATISAPASGRIGKLQVH-PGQLIGAG 265

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             ++  VPH    ++ A     Q++ ++    A V    +       F   +++I P   
Sbjct: 266 VEVVDFVPHDP--WVEANYQETQLRRIRVSDRADVHIDAFPGRT---FHGHVQEIAPASG 320

Query: 376 QQD----NNLQTQEYYEVILKITDLAFSDN---NIELRNGFPAEVLFTAKN 419
                   +  T  + +V+ +I      D+      LR G  AEV     +
Sbjct: 321 AATALLPPDNATGNFTKVVQRIPVKIVLDDLPPGDLLRPGLSAEVAIHTND 371


>gi|153809409|ref|ZP_01962077.1| hypothetical protein BACCAC_03723 [Bacteroides caccae ATCC 43185]
 gi|149127995|gb|EDM19217.1| hypothetical protein BACCAC_03723 [Bacteroides caccae ATCC 43185]
          Length = 344

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 62/384 (16%), Positives = 117/384 (30%), Gaps = 89/384 (23%)

Query: 48  GEILNEDNVVEIKSPFS------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           G I   DN    +          G IKK   E   Q+ +G  L+  ED E          
Sbjct: 34  GNIEYTDNAQVKQHITPINTRVPGFIKKICFEEYQQVRKGDTLVIIEDAEF--------- 84

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                   +   ++  D  N                                    +   
Sbjct: 85  -------RLRVAQAEADLAN----------------------------------ATAGRQ 103

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +     T   ++ ++   +E     +R  + + Q++L   + L +++AV++   +    
Sbjct: 104 ATTIGIATTQNNLSVSDASIEE----VRVQMENAQRELNRFEKLLQEDAVTKQQYD---- 155

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                      N+H      +   E    A    +    E +  L QN+       + L 
Sbjct: 156 -----------NVHTAYETAKARYEQVSRAKQSTSLVKSEQTHRLGQNEAGVRLAKAALE 204

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +         I++P  GT    +        Q  Q ++ IV  S   ++ A     Q+ +
Sbjct: 205 LARLNLSYTVIIAPCDGT-TGKKEILEGQLVQPGQTMVDIV-DSSDLWVIANYRETQLSN 262

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKID----PIISQQDNNLQTQEYYEVI----LKI 393
           +++G  A V       +    FK I+E I        S    +  T  + +V     ++I
Sbjct: 263 IREG--ADVEMTA-DAVPGVTFKGIVESISDATGAAFSMIPQDNATGNFVKVEQRIPVRI 319

Query: 394 TDLAFSDNNI-ELRNGFPAEVLFT 416
           +       ++  LR GF  E    
Sbjct: 320 SLKGNKPEDLKRLRAGFNVECEVK 343


>gi|119490778|ref|ZP_01623110.1| hypothetical protein L8106_04029 [Lyngbya sp. PCC 8106]
 gi|119453762|gb|EAW34920.1| hypothetical protein L8106_04029 [Lyngbya sp. PCC 8106]
          Length = 537

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 49/374 (13%), Positives = 125/374 (33%), Gaps = 57/374 (15%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLI----DLKKVSIKNLRCHIDTEKSALDFLN 121
           +++  QV+ G Q+  G  LL  ++I     +      +K+ ++  +     +++      
Sbjct: 146 VVEDVQVQIGDQVTAGQSLLVLKNIAAERELKQAQKEQKLRLQERKIARQQQQALRQQQK 205

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTC-----------SKVFNYGISSVYRSLKMKLTR 170
                 E A + ++  L +                      +     ++     ++K+ +
Sbjct: 206 IAQQQQETALQQKDMALQEQQMAQQQQVLELEQKIKYFDENIAPLRTNAAEAEAELKMAQ 265

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            +   +     ++     +AL           K L ++ A+SQ+ L Q E  +  +  +L
Sbjct: 266 NQMQQVPLPQRQDSVERAQALYQRATSRYQRYKGLRQQGAISQDQLEQIEAEMKIAEADL 325

Query: 231 REN----IHEQKNMLRHINELYDEANLEFANYLKEIS-------------RDLEQNQRTF 273
                  +   +       +   E  L      +E++             + L + ++  
Sbjct: 326 ESAKAVIVAAGRFAEVQTKQSQLERQLIVDQQQQELTEMKAKLELAQLQYQQLTEQRQMI 385

Query: 274 ADEMSKLT--------------------ILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
             ++++L                     ILE   +    I +  +G IV     +  N  
Sbjct: 386 QQQLAELREIQLPYESIETEQSGAEETEILESEIKTTEVIQATRSGVIVDLPV-AIGNQI 444

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                ++ +    +   +   V+ + I  +  G  ATV        + ++F A + +I+P
Sbjct: 445 FAGTKVVDLA-EMEHLNVEVPVSSRLINALYPGQQATVEIG--GGRKTQEFAATVVRINP 501

Query: 373 IISQQDNNLQTQEY 386
           + S+  N+    ++
Sbjct: 502 LPSEDLNHQVILQF 515


>gi|260430118|ref|ZP_05784093.1| secretion protein HlyD family protein [Citreicella sp. SE45]
 gi|260419041|gb|EEX12296.1| secretion protein HlyD family protein [Citreicella sp. SE45]
          Length = 389

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 98/328 (29%), Gaps = 27/328 (8%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +     ++  +    S L     +  V      +R E L+      +    +     + +
Sbjct: 73  ETDDAYVQADLSLVSSKLQGYVAEIPVQANQHVTRGEVLVRIEDGDYRIALEHAQAKLPT 132

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           + R+L     ++ +   +    E + S   A L +       +K L ++   SQ DL+  
Sbjct: 133 LDRTLARIDAQITAAEASVTQAEAQLSAAEATLRTAGITQARIKGLADRKVASQADLDDA 192

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
              +  +           K     I  L                 +  + + +  D    
Sbjct: 193 NGALETAEANRAAAQAAIKGAQAEIEVL---------------RAERAETESSRRDLELG 237

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           +   ++  +   + +P  GT+       +         L  +VP     Y+ A     Q+
Sbjct: 238 IAQAQRDLDHTVLRAPFDGTVANIAI-EAGELVNVGARLAAVVP-DHGLYVEANFKETQL 295

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKIT- 394
             +  G TA V       +   + +  +  + P      S    +  T  + +++ ++  
Sbjct: 296 PGIVAGETARVSIDA---MEGHEIEGRVVSVAPATGSVFSLLPADNATGNFTKIVQRVPV 352

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNTTL 422
            +   D    LR G    V       T 
Sbjct: 353 RIELPDGTPGLRAGLSVVVEI--DQRTA 378


>gi|192292427|ref|YP_001993032.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192286176|gb|ACF02557.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 422

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 48/378 (12%), Positives = 115/378 (30%), Gaps = 84/378 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N   + +  SG I      + S++  G  +   +D +        K+++ + R  I 
Sbjct: 117 VRANNTTLGARVSGHIAAILPRDNSEVKAGDVVFRIDDGDY-------KIAVDSARAKIA 169

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T+++ +  +                              +      S+V ++     +  
Sbjct: 170 TQEATIARI-----------------------------GRQIVAQQSAVEQAQAQLASAE 200

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +     LD + + +L     +S        + +FE +  S++           +    R
Sbjct: 201 AAAKRADLDFDRQQALSTKGFAS--------RAVFETSQASRDQTVASVAAAKAAYDAAR 252

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +N+   K                             + +    +  S L   E+      
Sbjct: 253 DNVEVTKAQQ-------------------------AEARAQLIELQSALAKAERDLAFTN 287

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P+ G +  N+  +  +Y    Q L  IVP     YI A     Q++ +K G    + 
Sbjct: 288 VRAPVTG-VFSNRLVNVGDYINAGQRLANIVPLDG-VYIDANFKETQLRRLKPGQKVGIS 345

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE--- 404
              ++  +    +  ++ + P   Q       +  T  + +++ ++        ++    
Sbjct: 346 VDAFSSRK---IEGTVDSLAPAAGQVFTLLPPDNATGNFTKIVQRVPVRIRVPADVAREG 402

Query: 405 -LRNGFP--AEVLFTAKN 419
            LR G     +V      
Sbjct: 403 LLRAGMSVYVDVDTRTGE 420


>gi|93005393|ref|YP_579830.1| secretion protein HlyD [Psychrobacter cryohalolentis K5]
 gi|92393071|gb|ABE74346.1| secretion protein HlyD [Psychrobacter cryohalolentis K5]
          Length = 456

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 53/384 (13%), Positives = 123/384 (32%), Gaps = 79/384 (20%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  IE +V +SG++    N V++ +  SG + +  VE G ++ +G  +   + +   +
Sbjct: 44  AEIGDIENNVMASGKVKA-LNTVDVGAQVSGEVTRLFVEVGDEVQKGDLIAQIDQVTQKN 102

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +  ++ S                                                    
Sbjct: 103 SLSNEQAS--------------------------------------------------LE 112

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              +++  +    L+R   +   + DL ++ + LR      Q D + ++ L   +A+SQ 
Sbjct: 113 QSEAALQSARAESLSRQAGLKSAQADLASRQAELRQ----AQADFSRLQGLLAIDAISQQ 168

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           D + Q   V  +   +             I                  + ++   Q    
Sbjct: 169 DYDTQRTKVQTAQAAVANARASIDTAKAAIATT---------------AANINSQQAALR 213

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRA 332
              + ++  ++     TI +P++GT+V   +         +Q    IV  +      I A
Sbjct: 214 KSQTNVSTAQEDLSYTTIRAPMSGTVVSV-TTEQGTTVNANQSAPTIVTLADLSTVRINA 272

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +++   + +VK G           D +       IE   P      ++     YY   ++
Sbjct: 273 QISEADVINVKAGLPVYFNIIGNPDQKYDSILKAIEP-APEKISDTSSTDAAIYYVGYIE 331

Query: 393 ITDLAFSDNNIELRNGFPAEVLFT 416
           + +   ++    +     A+V   
Sbjct: 332 VPN---TERRFRI--DMTAQVYIV 350


>gi|307300313|ref|ZP_07580093.1| secretion protein HlyD family protein [Sinorhizobium meliloti
           BL225C]
 gi|307319596|ref|ZP_07599022.1| secretion protein HlyD family protein [Sinorhizobium meliloti AK83]
 gi|306894718|gb|EFN25478.1| secretion protein HlyD family protein [Sinorhizobium meliloti AK83]
 gi|306904479|gb|EFN35063.1| secretion protein HlyD family protein [Sinorhizobium meliloti
           BL225C]
          Length = 403

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 72/253 (28%), Gaps = 14/253 (5%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
             L     + + S  +A L+  +     ++       ++Q   ++ +   + +       
Sbjct: 145 QKLALSRFDAQISGAKASLAQSEAQKKALEATVRGAELAQKRASELQSKSFGTDASRDSA 204

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                    ++           AN    +     + + T           ++      + 
Sbjct: 205 QVALDQARANLAGAEANIAAAKANITV-LEAQQMEAESTIRSLELARDKADRDLGFTILK 263

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G I  N +    +     Q L  +VP     YI A     QI H+  G    +   
Sbjct: 264 APYDGVI-GNVAVQVGDLVSAGQRLAALVPTD-QLYIDANFKETQIAHLVPGSKVEIHVD 321

Query: 354 HYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            Y D      +  +  I P          ++      T+    V ++IT  A       L
Sbjct: 322 AYEDH---PIEGTVASISPASGSVFSLLPAENATGNFTKVIQRVPVRITLPADVLAEGHL 378

Query: 406 RNGFPAEVLFTAK 418
           R G    V    +
Sbjct: 379 RAGLSVVVDVDTR 391



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 65/216 (30%), Gaps = 6/216 (2%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-- 110
           E ++  I    SG + K  V     +  G PL+T +D +     +  +  I   +  +  
Sbjct: 92  EGDIATISPKVSGYVAKVDVVANQHVKAGDPLVTLDDGDYRIAAEQAEAQIATQKLALSR 151

Query: 111 -DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLKMK 167
            D + S       + +  +KA E+          +     SK F  +    S   +L   
Sbjct: 152 FDAQISGAKASLAQSEAQKKALEATVRGAELAQKRASELQSKSFGTDASRDSAQVALDQA 211

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              +     N    +   ++L A     +  +  ++ L    A         +       
Sbjct: 212 RANLAGAEANIAAAKANITVLEAQQMEAESTIRSLE-LARDKADRDLGFTILKAPYDGVI 270

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             +   + +  +  + +  L     L      KE  
Sbjct: 271 GNVAVQVGDLVSAGQRLAALVPTDQLYIDANFKETQ 306


>gi|90423683|ref|YP_532053.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90105697|gb|ABD87734.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 408

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 88/261 (33%), Gaps = 15/261 (5%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           +    I   +  +E     + A LS+ ++    + +    +  +  D ++Q+ +  K   
Sbjct: 153 SARAKIATQQATIERIGRQVTAQLSAVEQAKAQLASADAASKRAGLDFDRQQALSTKGFA 212

Query: 229 ELRE-NIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEKT 286
                 + +             +A    A+   E++     + +    +  + L    + 
Sbjct: 213 SRATFEVSQAGRDQGAAAVQAAQAAYAAASDNVEVTKAQQLEARAQLVELQAALAKALRD 272

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            +   + +P+ G I  N+  ++ ++ Q  Q L  +VP     YI A     Q++ +K G 
Sbjct: 273 LDFTIVRAPVDG-IFSNRLVNTGDFIQAGQRLGNVVPLDD-VYIDANFKETQLRRLKPGQ 330

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAF 398
              +    +++      +  ++ + P                  T+    V +++   A 
Sbjct: 331 KVDISVDAFSNRH---IEGTLDSLSPAAGAVFTLLPPDNATGNFTKIVQRVPVRVKVPAA 387

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
                 LR G    V    K+
Sbjct: 388 VARENMLRAGMSVYVSVNTKD 408


>gi|254425950|ref|ZP_05039667.1| auxiliary transport protein, MFP family, putative [Synechococcus
           sp. PCC 7335]
 gi|196188373|gb|EDX83338.1| auxiliary transport protein, MFP family, putative [Synechococcus
           sp. PCC 7335]
          Length = 344

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/382 (11%), Positives = 108/382 (28%), Gaps = 48/382 (12%)

Query: 45  SSSGEILNEDNVV--EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + G I  E  V+   + +     + + +V  G  +     +   +              
Sbjct: 2   VALGRIEPEGEVIRLSVSNAADSRVNEIRVSEGDWVEAQQVIAVLQG------------- 48

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
                     E+   D  +    V ++  E  ++Q         S   +      + +  
Sbjct: 49  ---------AERRQADLNSAYALVRQRQAELAQQQNGSVKPASLSAQRETIARLEAQLST 99

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
             + +              E   +  +A+L   Q      + L    A+ + +L+   R 
Sbjct: 100 QSRQR--------------EAAIAKAQAVLQESQAKYQRYQALAAAGALERVELDVALRD 145

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   L      ++   + ++    E         + +   +E           +++ 
Sbjct: 146 YETAQANLAVEQSAREETEKTLSAQIAEEKARLTELGQVLPEAVEIAYAQLEQARIQVSQ 205

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +   +   + +P+AG I+   +          Q ++++    ++  I A+V    I+ V
Sbjct: 206 SQADLDDVLVRAPVAGQILKINTR-VGEQVNTQQGIVELAQTDQMMVI-AEVYETDIRKV 263

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKI------DPIISQQDNNLQTQEYYEVILKITDL 396
             G    V    Y  +       ++++I           +  +  Q      V +KI   
Sbjct: 264 SLGQPVEVT-SEYGGVET-DLTGVVDQIGLKIGKASFGGEDADPTQDVNARVVTVKIRLN 321

Query: 397 AFSDNNIELRNGFPAEVLFTAK 418
                 +    G    V     
Sbjct: 322 DEDSERVAALTGMQVRVSIDTD 343


>gi|319780373|ref|YP_004139849.1| secretion protein HlyD family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166261|gb|ADV09799.1| secretion protein HlyD family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 399

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 58/425 (13%), Positives = 118/425 (27%), Gaps = 91/425 (21%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK-------SPFSG 65
            PA  KR     ++ +IG+              ++G  +   +   ++          SG
Sbjct: 40  APARKKRSVRSFLLPVIGVALLGAGAWYGYDYWTTGRFMISTDDAYVQADMAFISPKISG 99

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + + +V     +  G PLL  +D +        K+++      I T    LD ++ + D
Sbjct: 100 YVDQVKVSENQLVKAGDPLLVVDDGDY-------KIAVAQAEAQIATLSKTLDRIDAQTD 152

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
               + +  + Q +       +                                      
Sbjct: 153 AARASLQQAQAQKVADQAAADNAAKVAARASQ---------------------------- 184

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                              L + +  +Q  L+  +  V ++   L     +      +I 
Sbjct: 185 -------------------LLKTHVGTQAQLDDAQTAVQQADAALVGADAQIAAAQANIG 225

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L  +                 ++  T A          +      + +P  G IV N+S
Sbjct: 226 VLQAQ---------------RAESASTLASLQLSHDKALRDLSFTVLKAPYDG-IVGNRS 269

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
               +     Q L  IVP     YI A     Q+  +  G    +          + F+ 
Sbjct: 270 VEQGDLVSPGQKLAVIVPMD-KLYIVANFKETQLARLVPGEKVRISVDA---TDGQDFEG 325

Query: 366 IIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +  + P           +      T+    V ++I   A +  + +LR G    V+   
Sbjct: 326 TVSSLAPASGAVFSLLPPENATGNFTKVVQRVPVRIDVPADALKSGKLRAGL--SVVVAV 383

Query: 418 KNTTL 422
            + T 
Sbjct: 384 DSRTA 388


>gi|186472221|ref|YP_001859563.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
 gi|184194553|gb|ACC72517.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
          Length = 382

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 84/292 (28%), Gaps = 28/292 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+    + +    +  N  I++    +      +            +     A  +  
Sbjct: 88  QPLVRLDSRQYDAVLEQANATIAARRADILRGEAELAQQQAAIAQARAQLDGATANEAHA 147

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              +   + L    A +   +        +++     +    ++  R I           
Sbjct: 148 ADQVKRYEPLAATGAETNERVADLRNTQRQASATRAADAAALQSAERQIATT-------- 199

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                     +EQ++   A   +     +   +   + SPI G +  ++S     YAQ  
Sbjct: 200 -------HAAIEQSRAQLAAAEASARQAQLDAQDTMVKSPIDGRV-GDRSVRVGQYAQPG 251

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--- 372
              M IVP   +  + A     QI  ++ G   T+R       +       I+   P   
Sbjct: 252 TRFMTIVPVQDVYLV-ANFKETQIGMMRIGQPVTLRVDALPGAK---LHGTIDSFSPGTG 307

Query: 373 -----IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                + +Q      T+    V ++I      +    L  G    V    ++
Sbjct: 308 SQFALLPAQNATGNFTKIVQRVPVRIKLDVGPETRKVLLPGLSVNVDVDTRS 359



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/144 (10%), Positives = 45/144 (31%), Gaps = 5/144 (3%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEK 114
            +    SG + +  V +  ++  G PL+  +  +   +++    +I   R      + E 
Sbjct: 64  TVAPKVSGYVAEVLVGDNQRVTSGQPLVRLDSRQYDAVLEQANATIAARRADILRGEAEL 123

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--KVFNYGISSVYRSLKMKLTRMR 172
           +       +         + E    D + +Y    +     N  ++ +  + +       
Sbjct: 124 AQQQAAIAQARAQLDGATANEAHAADQVKRYEPLAATGAETNERVADLRNTQRQASATRA 183

Query: 173 SIYLNRLDLENKSSLLRALLSSHQ 196
           +        E + +   A +   +
Sbjct: 184 ADAAALQSAERQIATTHAAIEQSR 207


>gi|254425496|ref|ZP_05039213.1| efflux transporter, RND family, MFP subunit, putative
           [Synechococcus sp. PCC 7335]
 gi|196187919|gb|EDX82884.1| efflux transporter, RND family, MFP subunit, putative
           [Synechococcus sp. PCC 7335]
          Length = 500

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 97/296 (32%), Gaps = 45/296 (15%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P+++++++ G+   +     + +P +G +++  ++ G ++  G  +   + +     + 
Sbjct: 99  GPLQVTIAAEGKTRVK-ERFVVAAPVTGRLERIALDVGDRVTAGETIAQIDPLPLGTQVS 157

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  ++ L+  I   ++                                          
Sbjct: 158 AAQAKLQELQAQISGVETQRPK-------------------------------------- 179

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
               + L     R++S    +   E + +   A     ++D      L  + AVS+ DL 
Sbjct: 180 ---SQELVQAEARLQSARAEQRADEAEVARAEAQWEQAKRDRDRTAQLESQGAVSRRDLE 236

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             + +      EL     +     + +N   ++  L   +  ++    +   Q   A   
Sbjct: 237 MAQTLESTRQRELEAARQQLAQSEQAVNAAAEDIPL-LQDQQRDPDYLIGVYQAQIAAVE 295

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRA 332
           ++L  L     + TI +P AG ++     S+    Q    L++I         I  
Sbjct: 296 AELANLADEASRTTITAPEAGDVLRVIEDSARFV-QAGDSLVEIGNAEDLELVIDV 350


>gi|322419559|ref|YP_004198782.1| RND family efflux transporter MFP subunit [Geobacter sp. M18]
 gi|320125946|gb|ADW13506.1| efflux transporter, RND family, MFP subunit [Geobacter sp. M18]
          Length = 418

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 73/222 (32%), Gaps = 28/222 (12%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY------LKEIS 263
           AV Q+  N        +  + R  + + K  L    EL  E  +  ++        +  +
Sbjct: 94  AVQQSRGNAL--TAEANLAKARVTVADTKRTLGRNRELLKEGIISQSDMDAAQTAYESAA 151

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMK 320
             ++  +         L   E      TI SP+ G +V             S     L  
Sbjct: 152 AGVKAAEAAVMQTRGALKQAETNLNYSTIRSPVDGIVVSRNVD-VGQTVAASFQTPTLFT 210

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQD 378
           I        I   V    I  VK G  AT     Y+D +   F+  + +I   P+++Q  
Sbjct: 211 IAQDLTKMQIDTSVDESDISKVKVGQKATFTVDAYSDQQ---FEGAVVQIRNAPVVTQN- 266

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                     V+  +T +A  +  ++L+ G  A V    +  
Sbjct: 267 ----------VVTYVTVIAVDNKELKLKPGMTANVTVETQRK 298


>gi|238480358|gb|ACR43773.1| putative bacteriocin secretion protein [Lactococcus lactis]
          Length = 456

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 51/377 (13%), Positives = 118/377 (31%), Gaps = 33/377 (8%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           EI + S  +I ++          S II+         + +G  L+  +           +
Sbjct: 45  EIIIKSQAQITSDLVSKIQIPIESKIIENKL-SENLSVKKGEALVKLDIESLKQQKSSLE 103

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE-SREEQLLDFLGKY-------------H 146
             I  ++  I   ++ +D L     +     +     QL   L +              H
Sbjct: 104 KEIPLVQNQILANQTFIDSLKQGKSLFTSDDDFGYSNQLQSLLSENTASDYAFKQSIIDH 163

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
            +    +    +S+ +S+  K          +    ++S+L  A   +  + L   + L 
Sbjct: 164 ESEKSTYQNSKNSIQKSISKKQVEKNDWEKIKSAWSSQSNLSGASEDTTSQYLNFQEQLK 223

Query: 207 EKNAVSQNDL-----NQQERIVYKSTLELRENIHEQKNML--RHINELYDEANLEFANYL 259
             +   +  +     +     + +   EL +   EQ  +      +        +    +
Sbjct: 224 ASSKEEKEQVKVTISSSINDKISQIDQELEQLEMEQSKLTPPASYDNEKSSQEYKKKQLV 283

Query: 260 KEISRDLEQNQRTFADEMSK----LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           ++     +Q +  F +   K    L  + K  + + I SPI G +  N +        + 
Sbjct: 284 EQTIATAKQKRIEFKEAQEKYNLELQEVNKQIQDEIITSPIDGFVHINYNVKDQKIIPKG 343

Query: 316 QPLMKIVPHSKLTYIR--AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           + + +I P  K   I   +++    +  VK G     +     +      +  I++I   
Sbjct: 344 EVIAEIYPEIKPGKIEFTSQIEASDLTQVKSGMRVHFKLDSKGNSPI-IMEGKIKEISAN 402

Query: 374 ISQQDNNLQTQEYYEVI 390
               +       +Y V 
Sbjct: 403 AETSERG----SFYVVK 415


>gi|322506951|gb|ADX02405.1| multidrug resistance efflux pump [Acinetobacter baumannii 1656-2]
          Length = 375

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 29/284 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  + K   +RA     
Sbjct: 105 QVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVEQVRAQYELS 164

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              L   + L    A S+++         K+  +   N+   K    ++        L  
Sbjct: 165 LAQLRRYQQLGNSGAASKSE-------QDKAAADAENNLAALKQAEANV--------LVA 209

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              LK         +   +   ++L   + T++   I++P+ G  +   +     Y    
Sbjct: 210 KEALKTAQVAEAGLEAQVSSAKAQLDQAQTTKDYSVIVAPMDGQ-LGEVNPRVGQYVAAG 268

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P        A     QI +++ G  A         ++ KKF   +E+I P   
Sbjct: 269 SQLLYLIPQQTWVI--ANFKETQIANMRIGQKAWFTVDA---MKHKKFTGHVEQISPAAG 323

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPA 411
            +      +  T  + +V+    ++IT     +    LR G   
Sbjct: 324 SEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGMEHLRPGMSV 367



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 92/270 (34%), Gaps = 13/270 (4%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P     +  +  + IIG++   W+  + P   SV  +     +     + S  +G +K  
Sbjct: 34  PTKRSTLLWMLGVLIIGILVILWAWRIGPFATSVQQTDNSYVKGKTTILSSQINGYVKDV 93

Query: 71  QVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            V++   + +G  L+  +         +    ++  K ++ N    I  +++ +     K
Sbjct: 94  LVKDFDHVKKGQVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAK 153

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            + +   +E    QL  +    +S  +       ++        L  ++    N L  + 
Sbjct: 154 VEQVRAQYELSLAQLRRYQQLGNSGAASKSEQDKAAADAE--NNLAALKQAEANVLVAKE 211

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   +  +  ++  K   ++   ++ D +     +     E+   + +       
Sbjct: 212 ALKTAQVAEAGLEAQVSSAKAQLDQAQTTK-DYSVIVAPMDGQLGEVNPRVGQYVAAGSQ 270

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  L  +     AN+ +    ++   Q+ +
Sbjct: 271 LLYLIPQQTWVIANFKETQIANMRIGQKAW 300


>gi|169797035|ref|YP_001714828.1| putative multidrug resistance efflux pump [Acinetobacter baumannii
           AYE]
 gi|184157052|ref|YP_001845391.1| multidrug resistance efflux pump [Acinetobacter baumannii ACICU]
 gi|213156560|ref|YP_002318221.1| secretion protein HlyD [Acinetobacter baumannii AB0057]
 gi|215484495|ref|YP_002326730.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB307-0294]
 gi|332852123|ref|ZP_08433950.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6013150]
 gi|332867521|ref|ZP_08437674.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6013113]
 gi|332872627|ref|ZP_08440595.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6014059]
 gi|88758810|emb|CAJ77865.1| Putative RND family drug transporter [Acinetobacter baumannii AYE]
 gi|169149962|emb|CAM87856.1| putative multidrug resistance efflux pump [Acinetobacter baumannii
           AYE]
 gi|183208646|gb|ACC56044.1| Multidrug resistance efflux pump [Acinetobacter baumannii ACICU]
 gi|213055720|gb|ACJ40622.1| secretion protein HlyD [Acinetobacter baumannii AB0057]
 gi|213985763|gb|ACJ56062.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB307-0294]
 gi|323516818|gb|ADX91199.1| multidrug resistance efflux pump [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332729495|gb|EGJ60834.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6013150]
 gi|332733938|gb|EGJ65083.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6013113]
 gi|332739156|gb|EGJ70015.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6014059]
          Length = 377

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 29/284 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  + K   +RA     
Sbjct: 107 QVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVEQVRAQYELS 166

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              L   + L    A S+++         K+  +   N+   K    ++        L  
Sbjct: 167 LAQLRRYQQLGNSGAASKSE-------QDKAAADAENNLAALKQAEANV--------LVA 211

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              LK         +   +   ++L   + T++   I++P+ G  +   +     Y    
Sbjct: 212 KEALKTAQVAEAGLEAQVSSAKAQLDQAQTTKDYSVIVAPMDGQ-LGEVNPRVGQYVAAG 270

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P        A     QI +++ G  A         ++ KKF   +E+I P   
Sbjct: 271 SQLLYLIPQQTWVI--ANFKETQIANMRIGQKAWFTVDA---MKHKKFTGHVEQISPAAG 325

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPA 411
            +      +  T  + +V+    ++IT     +    LR G   
Sbjct: 326 SEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGMEHLRPGMSV 369



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 92/270 (34%), Gaps = 13/270 (4%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P     +  +  + IIG++   W+  + P   SV  +     +     + S  +G +K  
Sbjct: 36  PTKRSTLLWMLGVLIIGILVILWAWRIGPFATSVQQTDNSYVKGKTTILSSQINGYVKDV 95

Query: 71  QVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            V++   + +G  L+  +         +    ++  K ++ N    I  +++ +     K
Sbjct: 96  LVKDFDHVKKGQVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAK 155

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            + +   +E    QL  +    +S  +       ++        L  ++    N L  + 
Sbjct: 156 VEQVRAQYELSLAQLRRYQQLGNSGAASKSEQDKAAADAE--NNLAALKQAEANVLVAKE 213

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   +  +  ++  K   ++   ++ D +     +     E+   + +       
Sbjct: 214 ALKTAQVAEAGLEAQVSSAKAQLDQAQTTK-DYSVIVAPMDGQLGEVNPRVGQYVAAGSQ 272

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  L  +     AN+ +    ++   Q+ +
Sbjct: 273 LLYLIPQQTWVIANFKETQIANMRIGQKAW 302


>gi|300112832|ref|YP_003759407.1| HlyD family secretion protein [Nitrosococcus watsonii C-113]
 gi|299538769|gb|ADJ27086.1| secretion protein HlyD family protein [Nitrosococcus watsonii
           C-113]
          Length = 412

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 86/294 (29%), Gaps = 32/294 (10%)

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           + + QL+             F         +L + + +++S++      +    L +A L
Sbjct: 79  AEQTQLVKQGQPLVKLDETDFQIAFERAKANLAITVRQVQSLFEAARQQQASVKLQQAQL 138

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              QK+    K L  KN VSQ  L+     +  +   L    H+       I     +  
Sbjct: 139 KLAQKNYYRAKKLIVKNLVSQQRLDDSLTNLQVAQDSLALAQHQLSGSEAIIAGTTVK-- 196

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                           +        ++L       ++  IL+P+ G +   ++       
Sbjct: 197 ----------------DHPQVKLAGAQLQEAYLALKRTRILAPVTGFVAK-RAVQVGQEV 239

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                +M IVP  +  +I A      +  V+ G   T+    Y       +   +  +  
Sbjct: 240 NPGMAMMAIVPL-RQVWIEANFKETSLAGVRIGQPVTLTADFYGSDVT--YHGKVAGLSA 296

Query: 373 IISQQDNNLQTQ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                   L  Q          +   V +++       + + +     A V   
Sbjct: 297 GTGAAFELLPPQNATGNWIKIVQRLPVRIELNQKELRQHPLFIGLSMSATVDIH 350



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 58/171 (33%), Gaps = 11/171 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N+V+     SG +     E    + QG PL+  ++ +        +++ +  + ++ 
Sbjct: 59  VRGNLVQFMPRVSGTVTVIGAEQTQLVKQGQPLVKLDETDF-------QIAFERAKANLA 111

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                +  L       + + + ++ QL      Y+     +    +S   + L   LT +
Sbjct: 112 ITVRQVQSLFEAARQQQASVKLQQAQLKLAQKNYYRAKKLIVKNLVSQ--QRLDDSLTNL 169

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +    +    +++ S   A+++           L    A  Q      +R 
Sbjct: 170 QVAQDSLALAQHQLSGSEAIIAGTTVKDHPQVKLA--GAQLQEAYLALKRT 218


>gi|257064811|ref|YP_003144483.1| multidrug resistance efflux pump [Slackia heliotrinireducens DSM
           20476]
 gi|256792464|gb|ACV23134.1| multidrug resistance efflux pump [Slackia heliotrinireducens DSM
           20476]
          Length = 536

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 57/383 (14%), Positives = 122/383 (31%), Gaps = 51/383 (13%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS+SG      +V  +     GII   QV  G Q+ +G  L   ++              
Sbjct: 116 VSASGSTQPASSV-VVTPEVDGIITDVQVAEGDQVEEGDVLFYIKN-------------- 160

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                  D+   A+   N +    +    S E  L +         S +     + V R 
Sbjct: 161 -------DSLDKAVTEANQQVKTAQNGVTSAELALKNAKKALSDANSGINGLASAKVQRP 213

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                    +   +      +++ +R    +  +D T              D  +     
Sbjct: 214 YGAAEFSWATYRPH------EAATVRTDYINGPEDDTSPDGAA---YADAGDYGE----- 259

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           Y    +   +       ++  +   +E  L   N   E    L+                
Sbjct: 260 YADYGDYGGSGDSDAYAVQQPSVSTEELQLAVDNAQIE----LDNANIALQSAKDAYDQA 315

Query: 284 EKTREQKTILSPIAGTIVYNQS-------FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
             T E++T+ +P +GTI+   +        +    +Q +  L+ I    +   +  +V  
Sbjct: 316 VATAEKRTVKAPKSGTIIAMSAEEGAAIGQAEGGTSQATGSLVTIA-DLESLQVTVQVNE 374

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             + +V++G  A V F    D+   +  A +  I  + S      ++ +   ++    +L
Sbjct: 375 VDVNNVQEGQQAKVTFAALPDV---ELDAEVRHIATLASGNPGEGESYQPGGIVTYAVEL 431

Query: 397 AFSDNNIELRNGFPAEVLFTAKN 419
              + +  ++ G  A V   +++
Sbjct: 432 VIPEPDERVKPGMTASVKIVSQS 454


>gi|296102440|ref|YP_003612586.1| putative multidrug efflux protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295056899|gb|ADF61637.1| putative multidrug efflux protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 360

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 94/305 (30%), Gaps = 29/305 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V + A   + E LL    + +          ++    +L   L + +S        +
Sbjct: 74  EVKVQDFAQVKKGELLLQIDDRIYRQRVHQAEAQLAMKIAALNNNLQQRKSAEAVIAKND 133

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA     Q DL  +K+L    ++S  + +       + + ++ +     +    
Sbjct: 134 AALKNARAQSLKTQADLKRVKDLTADGSLSIRERDAALASAAQGSADIEQAKATLEMS-- 191

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                           L+ +  +    +    +  + L + +   +   I++P  G +  
Sbjct: 192 -------------RQDLQTVIVNRGALEADVENAKAALELAQIDLQNTRIVAPRDGQLGQ 238

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      L  +VP        A +   Q+  ++ G           +   K 
Sbjct: 239 IAVR-LGAYVTAGTHLTTLVPPQHWVI--ANIKETQLAELRVGQPVKFTVDALNN---KA 292

Query: 363 FKAIIEKIDPII----SQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVL 414
           ++  +E I P      S    +  T  + ++     ++I  L   + +  LR G   +V 
Sbjct: 293 YQGRVESISPATGVEFSAITPDNATGNFVKIAQRIPVRIEVLGKPEESALLRPGMSVQVT 352

Query: 415 FTAKN 419
              + 
Sbjct: 353 IDTRE 357


>gi|254413963|ref|ZP_05027731.1| ABC exporter membrane fusion protein, DevB family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196179099|gb|EDX74095.1| ABC exporter membrane fusion protein, DevB family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 399

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 103/266 (38%), Gaps = 10/266 (3%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E   +  + N  + L+ A    + Q+     +     +   +  I++    +      + 
Sbjct: 93  EADQVIAIMNSQNRLQTALLEAQAQVKVAQAELAQVKAGAKSGEIAAQKSEIVRLQKNLE 152

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                +   +   +  +A + + Q +      L+++ A+S ++L+Q++ ++  +  +L +
Sbjct: 153 GELATQ---QAAIARWQAEVKTAQAEYDRYLWLYQEGAISASELDQKKLVLDTTQAQLNQ 209

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +Q      I E   +A        +    D++  Q      ++ +   +    +  I
Sbjct: 210 ASAQQDQSADTIREQIRQAQANLDKIAEIRPVDVQIAQAQVDRAIAAVKKAQADLAEAYI 269

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +PIAG I+   + S       +  + ++   +    + A+V    I  V++G TA +  
Sbjct: 270 RAPIAGRILDIYAQS-GEVVDATG-IAQLG-QTSQMQVVAEVYQTDIGEVREGQTAMITS 326

Query: 353 PHYADIREKKFKAIIEKIDPIISQQD 378
             ++     + +  +++I   + QQ+
Sbjct: 327 SSFS----GELRGTVQQIGLQVLQQE 348


>gi|116749819|ref|YP_846506.1| secretion protein HlyD family protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116698883|gb|ABK18071.1| secretion protein HlyD family protein [Syntrophobacter fumaroxidans
           MPOB]
          Length = 348

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 49/352 (13%), Positives = 102/352 (28%), Gaps = 82/352 (23%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I    V  G ++  G  L T E        +  + ++   R  +++++           
Sbjct: 57  RIASMLVREGDRVKPGQLLATLET-------ERLQYAVDRSRGQLESQR----------- 98

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                                 T S++         R  +  +   ++   N  +   + 
Sbjct: 99  ---------------------QTVSRLIAGSRPEEVRKARADVAAAQAQAANATNFAGRR 137

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +                  L E+NAVS+ +             E      E         
Sbjct: 138 A-----------------PLAERNAVSREE------------AETARYNAETAQAQHKSA 168

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +      LE          D+E  + T     ++  +  K     ++ +P  G I   + 
Sbjct: 169 QETLALALEGPRI-----EDVESAKATLQALEAEYALALKQLADASLYAPADGIIQN-RI 222

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
               +     +P+  +   ++  ++RA  +   +  ++ G  A V    Y   R + +  
Sbjct: 223 LEPGDMVTPQKPVYTLA-LTEPLWVRAYASESDLGKLRPGMIAEVTTDSYPGKRYRGWIG 281

Query: 366 IIEKIDPIISQQDNNL--QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            I        +    L  +T   Y+V + +      +   ELR G PA V  
Sbjct: 282 FISPTAQFTPKTVETLEIRTSLVYQVRVFVC-----NPQDELRLGMPATVTV 328


>gi|304410839|ref|ZP_07392456.1| secretion protein HlyD family protein [Shewanella baltica OS183]
 gi|307304990|ref|ZP_07584740.1| secretion protein HlyD family protein [Shewanella baltica BA175]
 gi|304350736|gb|EFM15137.1| secretion protein HlyD family protein [Shewanella baltica OS183]
 gi|306912392|gb|EFN42816.1| secretion protein HlyD family protein [Shewanella baltica BA175]
          Length = 352

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 59/323 (18%), Positives = 111/323 (34%), Gaps = 31/323 (9%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC-SKVFNYGISSVYRSLKM 166
            +++ + S +      Y VL    +++  Q  + L +      S   +   +S+  S   
Sbjct: 37  AYVEADISHISVKVPGYVVLSDVTDNQHVQKGELLAQLEDNQFSAKVSQAEASLASSKAD 96

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLS---SHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
             T    + L R  +   S+ + A  S     Q+ L+  K L   N  SQ+D++Q +   
Sbjct: 97  LQTLAAKVELQRALITQASAGVVAAESDKIRAQQQLSRSKKLKVSNYSSQDDVDQLQAGF 156

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +   L E         R +                  +  L+Q         + L + 
Sbjct: 157 DSAAARLDEAKAVLVAKQRELAV---------------FNAQLDQAGSVVEQADATLELA 201

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +       + +P +G I   +      Y Q  Q L  +VP     +I A     QIQH++
Sbjct: 202 KIQLNDTRVTAPFSGVI-GKRGAMVGQYVQPGQALYSLVP-DGAVWITANFKETQIQHMQ 259

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DL 396
            G +  V    + D   K F  +I+ + P    +         T  + +++ +I     L
Sbjct: 260 PGQSVQVSLDAFPD---KTFIGVIDSLSPASGAKFSLLPAENATGNFTKIVQRIPVRIRL 316

Query: 397 AFSDNNIELRNGFPAEVLFTAKN 419
             S+    +  G  A V     +
Sbjct: 317 DLSEEEAHMLPGLSAVVKVDTAS 339


>gi|300698052|ref|YP_003748713.1| multidrug resistance homolog transmembrane protein (emrA)
           [Ralstonia solanacearum CFBP2957]
 gi|299074776|emb|CBJ54339.1| putative multidrug resistance homolog transmembrane protein (emrA)
           [Ralstonia solanacearum CFBP2957]
          Length = 363

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 106/344 (30%), Gaps = 31/344 (9%)

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G  L+                 ++     I ++ +         D  E    +    + 
Sbjct: 20  AGAFLVLNRPESEASEQSTDDAYVQADSTVIVSQVAGTITRVEIADHQEVRAGAPLASID 79

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D   +  +  +K       +    L+ ++ R RS            +   A L   + + 
Sbjct: 80  DRDLRIAADNAKAHIASAQATMDGLQAQIARQRSTIDQ---ARATVAATGANLKLAEANR 136

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
               NL    + +     Q +            ++   ++  +    L            
Sbjct: 137 NRFANLARDGSGTVQAQQQADAQWEIQRAARERDLAGLRSAEQQTAIL------------ 184

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                +LE+ + +     ++    +       + +P++G +V  +S     YA+  QPL+
Sbjct: 185 ---RAELEKARASLLSAQAEKAAADLNLSYARVTAPVSG-VVAQRSARVGGYARVGQPLL 240

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----S 375
            +VP     Y+ A     Q+  V+ G  AT+      +IR    K  +E + P      S
Sbjct: 241 TLVPLD-AVYVEANFRETQLARVRVGQPATITVDALPNIR---LKGRVESLGPASGVSFS 296

Query: 376 QQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLF 415
               +  T  + +++    ++I      ++   LR G       
Sbjct: 297 ATPPHNATGNFTKIVQRLPVRIRIEPGQEDARLLRVGMSVRPYI 340


>gi|220920358|ref|YP_002495659.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
 gi|219944964|gb|ACL55356.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
          Length = 400

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 21/235 (8%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     + ++   +     ++S   +++    ++ +   +  + E +     A L+  ++
Sbjct: 134 LFQIDRRDYAAALREAQAQVASAEAAIRNIDAQIEAQRGSIAEAEAQVEQADAALAFARQ 193

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +    ++L ++ A S     Q    + +    L           + +  L          
Sbjct: 194 EAARYQDLAQRGAGSIQQSQQSTSNLQQQQANLSRARAAVTVAQKQVGSL---------- 243

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                       + + A   ++           T+ +  AG +V     +   YAQ  Q 
Sbjct: 244 -----QAQRAGAEASLAQARAQEEQARLNLGYTTVTAAQAGRVVRLTG-AVGQYAQAGQA 297

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           L   VP     +I A     QI  ++ G    V    Y D      K  +E + P
Sbjct: 298 LGMFVPDD--IWITANFKETQITDMRPGQDVDVEIDAYPDRT---IKGRVESVQP 347



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/244 (9%), Positives = 67/244 (27%), Gaps = 15/244 (6%)

Query: 11  RNHPASLKRMTLLSII-GIIGLITWSILLP----IEISVSSSGEILNEDNVVEIKSPFSG 65
           R HP       +L +  G  G   W + +      + +  ++ +      V       SG
Sbjct: 63  RRHPVWFALGAILLVATGAAGFWYWLVFVHPYESTDDAFVAARQFSVAPKV-------SG 115

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +    V +   +  G+ L   +  +    +   +  + +    I    + ++       
Sbjct: 116 YVVAVPVTDNQHVEAGSVLFQIDRRDYAAALREAQAQVASAEAAIRNIDAQIEAQRGSIA 175

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             E   E  +  L     +  +   +      +   +  +   + ++    N        
Sbjct: 176 EAEAQVEQADAALA--FARQEAARYQDLAQRGAGSIQQSQQSTSNLQQQQANLSRARAAV 233

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           ++ +  + S Q      +    + A +Q +  +        T      +      +    
Sbjct: 234 TVAQKQVGSLQAQRAGAEASLAQ-ARAQEEQARLNLGYTTVTAAQAGRVVRLTGAVGQYA 292

Query: 246 ELYD 249
           +   
Sbjct: 293 QAGQ 296


>gi|254427421|ref|ZP_05041128.1| efflux transporter, RND family, MFP subunit [Alcanivorax sp. DG881]
 gi|196193590|gb|EDX88549.1| efflux transporter, RND family, MFP subunit [Alcanivorax sp. DG881]
          Length = 441

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 89/278 (32%), Gaps = 11/278 (3%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +    +     + +  +  +    R   L   +     +        +S     L ++
Sbjct: 32  ARVRFVLADPQARSPQIQLFGRVQSPRAAGLTAVVTANVDSIPVRAGNRVS--EGQLLIQ 89

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           L    +          +      L ++  +  +  KNL  +  ++Q   +  ERI     
Sbjct: 90  LDDTEAALARDRAKATRDEAAAQLETTRLRYQSDKKNLALEKKLAQLSADNLERIQSLRE 149

Query: 228 LEL--RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
            +L  +  + E +      +    +  L  +++  E    L + +   A   ++L   + 
Sbjct: 150 RKLVAQTQLDEAEQAQARADLSLSQRQLSVSDFRNE----LARMEARLASAEAQLEQAKI 205

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              + T+ +P  GTI      +     +  +PL+ +        +RA++  + +  V++G
Sbjct: 206 DLARTTVNAPFDGTITQVSV-APGERVRPGEPLIDLF-ADTELEVRAQIPDRYLPAVRQG 263

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             A         +        ++++    +     +  
Sbjct: 264 LIAG-DLAASTQLEGHTLPLKLKRLAGDAADARGGIDG 300



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 52/140 (37%), Gaps = 8/140 (5%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V  G+++ +G  L+  +D E     D  K +       ++T +     L  + D 
Sbjct: 70  VDSIPVRAGNRVSEGQLLIQLDDTEAALARDRAKATRDEAAAQLETTR-----LRYQSDK 124

Query: 127 LEKAFESREEQL-LDFLGKYHSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              A E +  QL  D L +  S   +  V    +    ++       +    L+  D  N
Sbjct: 125 KNLALEKKLAQLSADNLERIQSLRERKLVAQTQLDEAEQAQARADLSLSQRQLSVSDFRN 184

Query: 184 KSSLLRALLSSHQKDLTMMK 203
           + + + A L+S +  L   K
Sbjct: 185 ELARMEARLASAEAQLEQAK 204


>gi|332296599|ref|YP_004438522.1| secretion protein HlyD family protein [Thermodesulfobium narugense
           DSM 14796]
 gi|332179702|gb|AEE15391.1| secretion protein HlyD family protein [Thermodesulfobium narugense
           DSM 14796]
          Length = 361

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 56/375 (14%), Positives = 111/375 (29%), Gaps = 82/375 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E   + I    SG I    VE   ++ +G  L   E  + T+ ++L + ++   +  I 
Sbjct: 60  VEGTYIYISPEISGKIVAVNVERYQEVKKGQVLAEIETSDYTNALNLNEATLNKAKATI- 118

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                     N+ +  EK  E+  +Q +D                               
Sbjct: 119 ----------NELESSEKQAEAALQQAMDN------------------------------ 138

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                         S  +A     QK+    ++L++++AVS                ++ 
Sbjct: 139 -------------YSSAKAQAELAQKEKVRYEDLYKQDAVS---------------ADVY 170

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +    ++       E   +A  +    L  I               + L       ++  
Sbjct: 171 DTYVTKEKTAVAAMEAAKKAVAQAKAALDTIRAQKVTALYAIKQAKANLDQALVNVKRTK 230

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P  G I   +     NYA   Q L  +V  +   ++ A     Q+  ++ G    + 
Sbjct: 231 IYAPEDGYIAK-KFAEVGNYAVPGQTLFILVKKND-LWVTANFKETQLDKMRVGQKVDIY 288

Query: 352 FPHYADIREKKFKAIIEK----IDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNI 403
              Y  I+   F+  +E        + S       T  + +V+    ++I   +  D   
Sbjct: 289 VDAYPGIK---FEGHVESFQPGTGAVFSLLPPENATGNFVKVVQRVPVRIAIDSPYDPKH 345

Query: 404 ELRNGFPAEVLFTAK 418
            L  G          
Sbjct: 346 PLYPGLSVNPYVDTG 360


>gi|113968867|ref|YP_732660.1| secretion protein HlyD family protein [Shewanella sp. MR-4]
 gi|113883551|gb|ABI37603.1| secretion protein HlyD family protein [Shewanella sp. MR-4]
          Length = 351

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 94/302 (31%), Gaps = 27/302 (8%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DV +     + E L        S         + S    L+    ++   +         
Sbjct: 58  DVTDNQHVRKGELLAQLEDNQFSAKVSQAEASLGSAKADLQTLAAKVELQHALISQASAG 117

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A     ++ LT  K L   N  SQ+D++Q +     +   L E         R +
Sbjct: 118 VVAAQADKLRAEQQLTRAKKLKVSNYSSQDDVDQLQAGFDSAAAGLDEAKALLVAKEREL 177

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                             +  L Q         + L + +       + +P +G I   +
Sbjct: 178 AV---------------FNAQLNQAGSVVEQSNAALELAKIQLNDTRVTAPFSGVI-GKR 221

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y Q  Q L  +VP     +I A     QIQH++ G +  V    + D   K F 
Sbjct: 222 GAMVGQYVQPGQALYSLVP-DGAVWITANFKETQIQHMQPGQSVQVSLDAFPD---KTFT 277

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTA 417
            +I+ + P    +         T  + +++ +I     L  S+    +  G  A V    
Sbjct: 278 GVIDSLSPASGAKFSLLPAENATGNFTKIVQRIPVRIRLDLSEEEARVVPGLSAVVKVDT 337

Query: 418 KN 419
            +
Sbjct: 338 AS 339


>gi|118581046|ref|YP_902296.1| secretion protein HlyD family protein [Pelobacter propionicus DSM
           2379]
 gi|118503756|gb|ABL00239.1| secretion protein HlyD family protein [Pelobacter propionicus DSM
           2379]
          Length = 375

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 82/259 (31%), Gaps = 28/259 (10%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           + L++ D   + +   A +S  + + T  + L  + A +  +L +         L   E 
Sbjct: 103 VELDQEDYRVQVAQAEAGVSVAENE-TGGEQLRAEGARATVELARARAEQADLDLRRGEA 161

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR------------TFADEMSKLT 281
           +  ++ + R   +    A     + L+E     +Q Q                   + L 
Sbjct: 162 LFRREVIPREQLDRLGTAQRVAQSQLREAREGFKQAQAVAGLAGPGGNRARVRQRQALLN 221

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPK 337
                     +L+P  G I            Q  QPLM +VP      I      ++T  
Sbjct: 222 EARLRLSYTRVLAPTNGYITRKAV-EPGANIQAGQPLMALVPLQDAWIIANYKEGQLT-- 278

Query: 338 QIQHVKKGYTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
              H++ G         Y D     +  +I+       S       T  Y +V+ +I   
Sbjct: 279 ---HIRPGQKVEFTVDAYPDRSFTGRVNSIMAGTGAAFSLLPPENATGNYVKVVQRIPVK 335

Query: 397 AFSDNNIE----LRNGFPA 411
              DNN +    LR G   
Sbjct: 336 ISIDNNSDPEHLLRVGMSV 354



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/154 (11%), Positives = 43/154 (27%), Gaps = 14/154 (9%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV------------SIKNLRCHIDT 112
           G +K+  VE+   + +G  L+  +  +    +   +              ++        
Sbjct: 83  GTVKRVLVEDNQYVGKGDALVELDQEDYRVQVAQAEAGVSVAENETGGEQLRAEGARATV 142

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E +         D+       R E +         T  +V    +         K  +  
Sbjct: 143 ELARARAEQADLDLRRGEALFRREVIPREQLDRLGTAQRVAQSQLREARE--GFKQAQAV 200

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           +          +    +ALL+  +  L+  + L 
Sbjct: 201 AGLAGPGGNRARVRQRQALLNEARLRLSYTRVLA 234


>gi|83746748|ref|ZP_00943796.1| Transmembrane multidrug resistance transport protein. HLYD family
           [Ralstonia solanacearum UW551]
 gi|83726517|gb|EAP73647.1| Transmembrane multidrug resistance transport protein.   HLYD family
           [Ralstonia solanacearum UW551]
          Length = 391

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/321 (11%), Positives = 87/321 (27%), Gaps = 30/321 (9%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           ++  I T    +     + DV         ++LL    + ++     +   + +   S  
Sbjct: 72  IQADIVTVAPKVSGYVERVDVANNQEVRAGQRLLRIDPREYAAQLAQYQAQVEAANASAD 131

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               ++ +          +                   +L    A +++ L+  +    +
Sbjct: 132 NARAQLATQKAAIAQARAQLQSAEHDAQFTASQTQRYASLVASGAETRDRLSTLQNQAAQ 191

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +                 I  L                  L Q +       ++  + E 
Sbjct: 192 ARANAAAQRAALTKATLEIAALQ---------------AQLRQAEAQAKTARAQAAVAEV 236

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 + +   G +  +Q      +      LM +VP     YI A     Q+ H++ G
Sbjct: 237 NLAATELRASTDGRVGDSQVR-IGQFVSAGTRLMSVVPAH--LYITANFKETQLSHMRIG 293

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSD 400
               V    + D      +  +E + P    Q         T  + +++ ++   +A   
Sbjct: 294 QPVHVHVDAFPDE---AIEGHVESLSPGTGAQFSLLPPQNATGNFIKIVQRVPVRIALDV 350

Query: 401 NNIELRN----GFPAEVLFTA 417
            +  ++     G    V    
Sbjct: 351 TDDRIKPLLAAGMSVTVDVDT 371


>gi|187251583|ref|YP_001876065.1| RND family efflux transporter MFP subunit [Elusimicrobium minutum
           Pei191]
 gi|186971743|gb|ACC98728.1| Efflux transporter, RND family, MFP subunit [Elusimicrobium minutum
           Pei191]
          Length = 390

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 73/214 (34%), Gaps = 21/214 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           A  +  + QQE  + K+  EL       +       +LY + N    + L +       N
Sbjct: 108 ATLRQQVLQQEASLMKAQSEL----TNSQRTYERYQQLYAQ-NFVSKSELDQAETTYLTN 162

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHS-K 326
           Q       + L   +   +   I SP+ G ++  ++         S   P + +V     
Sbjct: 163 QANTIQAKASLAKAKTDLDYTRITSPVDGIVIS-RAVDLGQTVAASFNTPTLFLVAQDLT 221

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              I   V+   I  V++G   T     Y  +    FK ++ ++          +Q    
Sbjct: 222 KMQIEVPVSEADIIKVQEGQNVTFTIDGYPSVT---FKGVVNQV----RLSPETVQGMVA 274

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           Y VI+ + +       ++L+ G  A V    +  
Sbjct: 275 YTVIIMVDNPE-----LKLKPGMTANVTIITQEK 303



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 5/134 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   V +SG I       E+ +  SG I K  V+  S + +G  L   +       +  +
Sbjct: 59  IREVVEASGTINPVSQT-EVGTQVSGTIYKLYVDFNSPVKRGQLLAEIDPATLRQQVLQQ 117

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S+   +  +   +   +    +Y  L       + +L      Y +  +       S 
Sbjct: 118 EASLMKAQSELTNSQRTYE----RYQQLYAQNFVSKSELDQAETTYLTNQANTIQAKASL 173

Query: 160 VYRSLKMKLTRMRS 173
                 +  TR+ S
Sbjct: 174 AKAKTDLDYTRITS 187


>gi|300867453|ref|ZP_07112107.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300334568|emb|CBN57275.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 512

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/262 (9%), Positives = 88/262 (33%), Gaps = 20/262 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLI 96
             +V++ G +  +  V+++ +P       I + +VE G ++ +G  +   +        +
Sbjct: 64  AKTVTALGRLSPKGEVIKVAAPSLSEGSKIDQLRVEEGDRVREGQVIAILDSRDRLRAAL 123

Query: 97  DLKKVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           +  +  +K     +   K+      ++ +   + +     + +      K     +++  
Sbjct: 124 EEAEKEVKFQLAELAKIKAGAKTGEISAQQAEITRLEAQFQRETEAQQAKVARLEAQLQR 183

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK----------- 203
               +     +++    R   + +  L N  + LR  +++    +  ++           
Sbjct: 184 QTEVAQANLARLQAQLQRQTQVEQAKLANLQAQLRGEIAARNATIDRLEAELRNATAEDE 243

Query: 204 ---NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               L++  A+S +  + +   V      ++E        ++ + +   E+       L+
Sbjct: 244 RNLELYQTGAISASAYDSKRLTVETGVERIKEAKANLDKTVQTLQQQIKESQANLTQTLE 303

Query: 261 EISRDLEQNQRTFADEMSKLTI 282
                + Q +      +  L  
Sbjct: 304 TGRAQVNQAKAELNQTLETLAQ 325


>gi|33593283|ref|NP_880927.1| putative multidrug resistance protein. [Bordetella pertussis Tohama
           I]
 gi|33563658|emb|CAE42562.1| putative multidrug resistance protein [Bordetella pertussis Tohama
           I]
 gi|332382692|gb|AEE67539.1| putative multidrug resistance protein [Bordetella pertussis CS]
          Length = 396

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 47/421 (11%), Positives = 114/421 (27%), Gaps = 80/421 (19%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSIL-LPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
              HPA  + + L + +  +  I +++          S+ +     N+V+I     G + 
Sbjct: 5   PTTHPARKRLLWLATGVFAVLAIAYAVWWALFGSHFESTDDAYVHGNLVQITPQVPGTVV 64

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             + ++   +  G  L+  +  +T        V+++     +      +  L  + D L 
Sbjct: 65  AIEADDTEAVTAGQALVRLDPADTD-------VALQQAEARLAQTVRQVRTLYVQNDALA 117

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              + R+ ++           S                                      
Sbjct: 118 ADIDVRQAEIARAQADLKRAQS-------------------------------------- 139

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                    DL   + L +   VS  ++   E  +  +   L +           +    
Sbjct: 140 ---------DLQRRQTLAKSGGVSGEEILHAETALKSAQSALAQARANLAAAQAKLATNQ 190

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                       ++     Q +  +             R +  + +P+ G +   ++   
Sbjct: 191 ALTEGTTVAEHPDVRNAAAQVRNAWL-----------NRSRTVLPAPVDGIVAR-RAAQV 238

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                    LM +VP     ++ A     Q++H++ G  A +    Y       +   + 
Sbjct: 239 GQRVAPGAMLMNVVPLD-QIWVEANFKEGQLRHMRIGQPARITADLYGGSV--VYDGKVI 295

Query: 369 KIDPIISQQDNNLQTQ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            +D         L  Q          +   V + +       + + +      EV   A+
Sbjct: 296 GLDAGTGSAFALLPAQNASGNWIKVVQRVPVRIALDPEQLKTHPLRVGLSMDVEVDVGAE 355

Query: 419 N 419
            
Sbjct: 356 E 356


>gi|113475147|ref|YP_721208.1| RND family efflux transporter MFP subunit [Trichodesmium erythraeum
           IMS101]
 gi|110166195|gb|ABG50735.1| efflux transporter, RND family, MFP subunit [Trichodesmium
           erythraeum IMS101]
          Length = 634

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 55/462 (11%), Positives = 140/462 (30%), Gaps = 100/462 (21%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H     N     P S +R TL+ ++ I  +        ++ +    G +    ++  IK 
Sbjct: 74  HSNKTPNETSAVPPSRRRSTLVKVMPIKTI-------SLQETSEFVGTMEATRSIK-IKP 125

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK------- 114
              G + +  V+ G+ + +G  +   +       +   K +++     +   +       
Sbjct: 126 EIDGRVVEILVKEGTFVSEGQAIAKLKSDNVEANLKRAKANLQQSEARLAQLRIGARPEK 185

Query: 115 ---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              +      ++  + E    +R E++     +   + +++      +    +      +
Sbjct: 186 IAAARARLQQSQARLAEMKRGTRPEKIAAARARLQQSQARLAELRAGTRDEEIAQAKAEL 245

Query: 172 RS------------IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV-------- 211
           +             +       + +  + +A L    + +   +NL  + A+        
Sbjct: 246 QEAKVRLENARSGGLLEEIAQAKAQIKVQQAELELASEQVKRNQNLRAEGAIAELTFQEI 305

Query: 212 -------------SQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFAN 257
                        ++  + Q +R    +   L   + +Q+ +LR + N    E       
Sbjct: 306 FQEEKAAQARVEEAKRRVTQLQRNRESTIQTLEAAVEQQRQILRRLKNGTRPEEITRVEA 365

Query: 258 YLKEISRDLEQNQR------------TFADEMSKLTILEK-------------------- 285
            + E   +LE+ Q               A+  S L  L+                     
Sbjct: 366 EVGEARNNLEELQNGTRLEEIARAEAEVAEARSNLEELQNGTRPEEIAEGLAEVAAALAE 425

Query: 286 ------TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                   E+  +++P AG I  +      ++      +M  V  +++  +   +  +++
Sbjct: 426 VDSWQAEFEETVVVAPFAGVI-GDMIVKIGDFVNDGD-IMTTVTANQVLSVNLLIPLERL 483

Query: 340 QHVKKGYTATVRFPHYADIREKKF--KAIIEKIDPIISQQDN 379
             +  G    VR        E K      +  I P +S    
Sbjct: 484 GDLWLGLPVEVR------SPEGKVLGMGKVSFISPTVSDSQT 519


>gi|193076554|gb|ABO11214.2| Putative RND family drug transporter [Acinetobacter baumannii ATCC
           17978]
          Length = 375

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 29/284 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  + K   +RA     
Sbjct: 105 QVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVEQVRAQYELS 164

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              L   + L    A S+++         K+  +   N+   K    ++        L  
Sbjct: 165 LAQLRRYQQLGNSGAASKSE-------QDKAAADAENNLAALKQAEANV--------LVA 209

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              LK         +   +   ++L   + T++   I++P+ G  +   +     Y    
Sbjct: 210 KEALKTAQVAEAGLEAQVSSAKAQLDQAQTTKDYSVIVAPMDGQ-LGEVNPRVGQYVAAG 268

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P        A     QI +++ G  A         ++ KKF   +E+I P   
Sbjct: 269 SQLLYLIPQQTWVI--ANFKETQIANMRIGQKAWFTVDA---MKHKKFTGHVEQISPAAG 323

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPA 411
            +      +  T  + +V+    ++IT     +    LR G   
Sbjct: 324 SEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGMEHLRPGMSV 367



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 92/270 (34%), Gaps = 13/270 (4%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P     +  +  + IIG++   W+  + P   SV  +     +     + S  +G +K  
Sbjct: 34  PTKRSTLLWMLGVLIIGILVILWAWRIGPFATSVQQTDNSYVKGKTTILSSQINGYVKDV 93

Query: 71  QVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            V++   + +G  L+  +         +    ++  K ++ N    I  +++ +     K
Sbjct: 94  LVKDFDHVKKGQVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAK 153

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            + +   +E    QL  +    +S  +       ++        L  ++    N L  + 
Sbjct: 154 VEQVRAQYELSLAQLRRYQQLGNSGAASKSEQDKAAADAE--NNLAALKQAEANVLVAKE 211

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   +  +  ++  K   ++   ++ D +     +     E+   + +       
Sbjct: 212 ALKTAQVAEAGLEAQVSSAKAQLDQAQTTK-DYSVIVAPMDGQLGEVNPRVGQYVAAGSQ 270

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  L  +     AN+ +    ++   Q+ +
Sbjct: 271 LLYLIPQQTWVIANFKETQIANMRIGQKAW 300


>gi|255021255|ref|ZP_05293305.1| Membrane fusion component of tripartite multidrug resistance system
           [Acidithiobacillus caldus ATCC 51756]
 gi|254969370|gb|EET26882.1| Membrane fusion component of tripartite multidrug resistance system
           [Acidithiobacillus caldus ATCC 51756]
          Length = 385

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/336 (12%), Positives = 106/336 (31%), Gaps = 33/336 (9%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           + +R +    +  +  +  + +   +     + + +       S         + +   +
Sbjct: 41  QRIRTNDAYVQGNIVPVQAQTEATVRRVYVEDTEYVHAGALLASVQGDRSYLALKASEAA 100

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L   +  +R  +     L++     +A  +   ++L+  +      AV+   +   +  +
Sbjct: 101 LGRTVRELRREFAEVQRLQHSLDAQKAEYAKLGENLSRYRKAQAGGAVATIRITDTQADM 160

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                 LR  +   +  L     L    NL     ++     +E    ++A         
Sbjct: 161 RV----LRAQMGATRAKLAAALALVGNTNLSDNPLVRAAVTRVESAYLSWA--------- 207

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
                ++ + +P++G +    ++         Q L  IVP   L  + A V   ++  V+
Sbjct: 208 -----RRDLRAPVSGYVAQRHAY-PGLRIHPGQQLFSIVPLHGLWVV-ANVKETEMAQVR 260

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQEYY---EVILKITD 395
            G   TVR   Y       ++ ++E +              N      +    V L+I+ 
Sbjct: 261 PGD--TVRLTSYYYGDSVVYRGVVEGLVPGAGSAFSILPPENATGNYIHIVERVPLRISL 318

Query: 396 LAFSDNNIELRNG--FPAEVLFTA-KNTTLAQEIIH 428
            A +     LR G    A +        ++   +  
Sbjct: 319 PAKALAKHPLRPGLSMVARIDIAGKGKRSVLAPLTK 354



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 45/121 (37%), Gaps = 4/121 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + N+V +++     +++  VE+   +  G  L + +   +   +   + ++      + 
Sbjct: 50  VQGNIVPVQAQTEATVRRVYVEDTEYVHAGALLASVQGDRSYLALKASEAALGRTVRELR 109

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E + +  L +  D  +  +     +L + L +Y    +      I        M++ R 
Sbjct: 110 REFAEVQRLQHSLDAQKAEY----AKLGENLSRYRKAQAGGAVATIRITDTQADMRVLRA 165

Query: 172 R 172
           +
Sbjct: 166 Q 166


>gi|196233005|ref|ZP_03131854.1| efflux transporter, RND family, MFP subunit [Chthoniobacter flavus
           Ellin428]
 gi|196222983|gb|EDY17504.1| efflux transporter, RND family, MFP subunit [Chthoniobacter flavus
           Ellin428]
          Length = 402

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 77/222 (34%), Gaps = 18/222 (8%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELR--ENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +     V+Q D       V +   +L   + + E   +     +   E +      L  
Sbjct: 77  PVKANQVVAQIDPAVYVANVDQCNGDLANAKAVLELAQLTAKRKQELVEQHAAPQADLDT 136

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLM 319
               L Q + T   + + L + +   E  TI SP+ G ++  +S         +   P++
Sbjct: 137 AIATLHQAEATVKVKEANLELAKVNLEHCTIYSPVDGIVIS-RSVDVGQTVAAAMNAPVL 195

Query: 320 KIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            ++ +      I + V    + +V+ G         +       F   + + +   +   
Sbjct: 196 FLIANDLTKMQIDSNVAEADVGNVEVGQDVDFSVDAFPYRT---FHGKVVQ-NRNAAVTV 251

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            N+ T   Y+V++ +      +++++L+ G  A V       
Sbjct: 252 QNVVT---YDVVISVD-----NSDLKLKPGMTATVQIIISRK 285



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 46/150 (30%), Gaps = 21/150 (14%)

Query: 19  RMTLLSIIGIIGLITWSI-----------LLPIEI-----SVSSSGEILNEDNVVEIKSP 62
             TLL I G++    W                IE       V+++G +    NV  + S 
Sbjct: 4   LFTLLIIAGLLAGGWWYYKRNQNNEPQFLTATIEKGSLTKVVTATGTLNPVLNV-TVGSQ 62

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I K   +  S +     +   +       +D     + N +  ++           
Sbjct: 63  ISGNIVKLYADWNSPVKANQVVAQIDPAVYVANVDQCNGDLANAKAVLE----LAQLTAK 118

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +   L +   + +  L   +   H   + V
Sbjct: 119 RKQELVEQHAAPQADLDTAIATLHQAEATV 148


>gi|149195358|ref|ZP_01872444.1| Secretion protein HlyD [Caminibacter mediatlanticus TB-2]
 gi|149134490|gb|EDM22980.1| Secretion protein HlyD [Caminibacter mediatlanticus TB-2]
          Length = 372

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 110/352 (31%), Gaps = 63/352 (17%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++K  V+ G  I +G  L      E  D +      IK+    ++             
Sbjct: 57  GRVEKIYVKAGDNIKKGEVLTKLNSQEFLDKLKAINEEIKSKEKELE------------- 103

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                    SK  N  I     ++  KL  +++       L  +
Sbjct: 104 -----------------------FASKNLNLTIKEANLNINAKLNEIKA-------LNYQ 133

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              L+A++   +KDL  ++ L  +N    + L      + K   EL   I ++  +   +
Sbjct: 134 IDTLKAVIKQDKKDLKRIEKLVLQNKAPHHKLELSILKLTKDKNELNALIKKRDILNVAL 193

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N           +YLK     ++          +K   ++    + T+ SPI G +  ++
Sbjct: 194 NVAKTNLTKAKTSYLK-----IKALSNGINALKAKRDEIKTIINELTLKSPINGYV-ESK 247

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +          ++ ++      Y++  V       ++ G  A +              
Sbjct: 248 IANEGEVIGAGGVVLDLI-DPSSFYLKVYVDTLTNDKIRLGQKAEIFL---DSDLNSPIP 303

Query: 365 AIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRNGFPA 411
           A +  I          +  +       YEV L+       DN ++L  G PA
Sbjct: 304 AKVVYISKKAEFTPKEVAVRSDRITRVYEVWLRP---LKPDNRLKL--GLPA 350


>gi|291616841|ref|YP_003519583.1| EmrA [Pantoea ananatis LMG 20103]
 gi|291151871|gb|ADD76455.1| EmrA [Pantoea ananatis LMG 20103]
          Length = 381

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/357 (10%), Positives = 98/357 (27%), Gaps = 75/357 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E N V I +  SG + K  V +  ++ +G  L+  +  +        K  +         
Sbjct: 77  EGNAVTIAAKASGYVVKLLVNDNQRVRKGDLLVEIDPSDNEAQRAQAKAQLGLATA---- 132

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                                 + QL     +Y +   +       +    +  +    R
Sbjct: 133 -----------------QLHQAQAQLALSRVQYPAQRDQALADQAKAEANYMNAQADYRR 175

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                                              +    +      +R +  ++ +LR 
Sbjct: 176 Q----------------------------------RGVDPRA---TSQRNIDSASAQLRS 198

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + ++    +     E   + A  +++   ++E  Q       ++L + E       +
Sbjct: 199 AQAQLQSAKAQV-----EVASQVALQIRQQETNVEARQEQVEQAKAQLNVAELNLSYTLV 253

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +            Q    L  +V      +I A     Q++ +  G    +  
Sbjct: 254 RAPYDGFVTKRNV-QMGTLVQAGSALFSLVSPD--IWITANFKESQLERMNPGDKVAISV 310

Query: 353 PHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             + D++    +  ++ I         +    N     Y +++ ++      D  ++
Sbjct: 311 DAWPDMK---LEGHVDSIQMGTGSRFSTFPSENATGN-YVKIVQRVPVKIVIDKGLD 363


>gi|237803567|ref|ZP_04591152.1| HlyD family secretion protein [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331025549|gb|EGI05605.1| HlyD family secretion protein [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 384

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 48/388 (12%), Positives = 114/388 (29%), Gaps = 87/388 (22%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PIE + ++      +     I    SG + +  V++   +  G  L+  +D        
Sbjct: 66  SPIESTENAQ----VKGQTTLIGPQLSGYVYEVAVQDFQFVKAGDLLVRLDD-------R 114

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + +  ++     +  +K++L     +    E     R+ +L + + +   + +       
Sbjct: 115 IYRQRLEQAVAQLAMQKASLANNLQQRRSAEATIGQRQAELQNSIAQSRKSAA------- 167

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                                                   DL   + L    +VS+++L 
Sbjct: 168 ----------------------------------------DLRRNQALVTDGSVSKSEL- 186

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                V ++          +   +  I              L+ +  +    + + A+  
Sbjct: 187 ----DVTRAADAQANAAVAEAKAVLQIA----------REDLQTVIVNRGSLEASVANAQ 232

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + + +     +   I++P  G +          Y      LM +VP  +     A +   
Sbjct: 233 AAIELARIDLDNTRIVAPRDGQLGQIGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKET 289

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKI 393
           Q+ HV+ G   +       D    +    +++I P    +      +  T  + ++  +I
Sbjct: 290 QMAHVRLGQPVSFTVDALDDR---EMHGHVQRISPAAGSEFSLLPADNATGNFVKISQRI 346

Query: 394 TDLAFSDNNIE----LRNGFPAEVLFTA 417
                 D +      LR G    V    
Sbjct: 347 PVRIVVDADQPMLEHLRPGMSVVVSIDT 374


>gi|182414039|ref|YP_001819105.1| secretion protein HlyD family protein [Opitutus terrae PB90-1]
 gi|177841253|gb|ACB75505.1| secretion protein HlyD family protein [Opitutus terrae PB90-1]
          Length = 364

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 100/304 (32%), Gaps = 32/304 (10%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E++   +   L +      ++      +   +++++L   R+ Y  ++         
Sbjct: 71  AVRENQPVAVGQVLFRLDDEPYRIALAEAQAELAAVRLELATSRANYQAKV---AAIGEA 127

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L+  + +L   + L   N                    L +  H  ++  R ++ L 
Sbjct: 128 QEQLAFAETELHRQEELNATNVAP--------------AAALDQARHAVESARRRVSVLQ 173

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            EA    A+       D  +    F    +++   ++   +  I +PIAG +    +   
Sbjct: 174 QEAATVLASLGGVDRPD--EQNPDFLAARARVAKAQRDLARTVITAPIAGIVANVTNLPV 231

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI--------RE 360
             + Q +QP   +V  +   +I A +   ++ H++ G    +    Y             
Sbjct: 232 GKFLQPAQPAFTLV-AADHVWIEANLKETELTHLQPGNPVKIEIDTYPHRQWLGRVAAIG 290

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               A    I P  +  +     Q    V +++     +D    LR G  AEV     +T
Sbjct: 291 PATGAEFALIPPQNASGNWVKTVQRI-PVRIRV---ESNDPARPLRAGMSAEVRIDTGHT 346

Query: 421 TLAQ 424
              +
Sbjct: 347 RALR 350



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 66/207 (31%), Gaps = 16/207 (7%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDN------VVEIKSPFSG 65
             PA   R  +L + G + +   ++ L +       G I+  DN       + + +  +G
Sbjct: 11  PTPAHRWRRRVLLLAGPLLVAVAALWLYLHG-----GRIVTSDNAYVHADKLTVTAEVAG 65

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL----- 120
            +K   V     +  G  L   +D      +   +  +  +R  + T ++          
Sbjct: 66  AVKDVAVRENQPVAVGQVLFRLDDEPYRIALAEAQAELAAVRLELATSRANYQAKVAAIG 125

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +  +     E   ++ L+      +       + + S  R + +      ++  +   
Sbjct: 126 EAQEQLAFAETELHRQEELNATNVAPAAALDQARHAVESARRRVSVLQQEAATVLASLGG 185

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++         L++  +     ++L  
Sbjct: 186 VDRPDEQNPDFLAARARVAKAQRDLAR 212


>gi|293368944|ref|ZP_06615545.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CMC 3f]
 gi|292635964|gb|EFF54455.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CMC 3f]
          Length = 363

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 97/285 (34%), Gaps = 31/285 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL    + +    K     +   + S  +  + + + + N    +   +  +A L   ++
Sbjct: 94  LLVLDNREYQIKVKEAEAALLDAHGSQDVLHSGIETSHTNIAVQDANIAEAKAKLWQLEQ 153

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D    + L ++ +V +    Q +     +    +  + +++  L    E   +     A 
Sbjct: 154 DYHRFERLLKEESVPEQQYEQAKAAYEAAKARYQALVAQKQAALSQYAETSKKTTGTEAA 213

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L++                + L + +       + +P  G +   ++     Y Q  Q 
Sbjct: 214 ILRK---------------EADLDLAKLNLSYTVLTAPYDGYM-GRRTLEPGQYVQTGQT 257

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID------ 371
           +  +V  +K  +I A     QI ++  G    ++      +  K F   +  I       
Sbjct: 258 ISYLV-RNKDKWITANYKETQIANIYIGQQVRIKVDA---VPGKIFHGEVTAISEATGSK 313

Query: 372 ----PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
               P  +   N ++ Q+   V + + D++  +   +LR G   E
Sbjct: 314 YSLVPTDNSAGNFVKVQQRIPVRIDLEDVS-PEEMAQLRAGMMVE 357



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 51/154 (33%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+ + +    + QG  LL  ++ E    +   + ++ +     D   S ++  +  
Sbjct: 74  SGYIKEVRFKEHQYVHQGDTLLVLDNREYQIKVKEAEAALLDAHGSQDVLHSGIETSHTN 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             V +      + +L      YH     +    +                     L  + 
Sbjct: 134 IAVQDANIAEAKAKLWQLEQDYHRFERLLKEESVPEQQYEQAKAAYEAAKARYQALVAQK 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +++L +   +S +   T    L ++  +    LN
Sbjct: 194 QAALSQYAETSKKTTGTEAAILRKEADLDLAKLN 227


>gi|212711862|ref|ZP_03319990.1| hypothetical protein PROVALCAL_02937 [Providencia alcalifaciens DSM
           30120]
 gi|212685384|gb|EEB44912.1| hypothetical protein PROVALCAL_02937 [Providencia alcalifaciens DSM
           30120]
          Length = 356

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 87/300 (29%), Gaps = 19/300 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F  + ++L     +            +     ++    + +      +L  +   
Sbjct: 64  VKEGDFVQQGQELARMDTRALQEQLHEVQAQLRQAISAVATAESGLVQRKSEKLAAQAVV 123

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L + QK L   + L +  AVSQ  ++     +  +   L  +    K  +    
Sbjct: 124 RQREAELDAAQKRLNRSRVLVKTKAVSQQQVDDDTAQMQGAKAALEAS----KAQVAAST 179

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              D A          +       +R  AD            E   + +P +G + Y + 
Sbjct: 180 AAIDSAQAGIVQAKNRVEAATATERRITAD-----------LEDSILKAPRSGRVQY-RV 227

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +Q   V  G    +      +I       
Sbjct: 228 AEPGEVLGAGGRVLNMVDLSD-VYMTFFLPTEQAGKVALGSEVHIILDAAPNIVIPAKTT 286

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            +  +     +  +  N + +  + V  +I+      +   ++ G P +        T  
Sbjct: 287 FVASVAQFTPKTVETQNERLKLMFRVRARISPELLEKHLEYVKTGLPGKAYVRLDEQTPW 346



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 52/154 (33%), Gaps = 2/154 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V+ G  + QG  L   +     + +   +  ++     + T +S L    ++ 
Sbjct: 57  GRIDTILVKEGDFVQQGQELARMDTRALQEQLHEVQAQLRQAISAVATAESGLVQRKSEK 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +     RE +L     + +   S+V     +   + +     +M+         + +
Sbjct: 117 LAAQAVVRQREAELDAAQKRLN--RSRVLVKTKAVSQQQVDDDTAQMQGAKAALEASKAQ 174

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +   A + S Q  +   KN  E    ++  +  
Sbjct: 175 VAASTAAIDSAQAGIVQAKNRVEAATATERRITA 208


>gi|209543858|ref|YP_002276087.1| secretion protein HlyD family protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209531535|gb|ACI51472.1| secretion protein HlyD family protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 358

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 87/293 (29%), Gaps = 28/293 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E L       +    KV    + +    +      +                  A L+  
Sbjct: 72  EVLAHIEDDDYRAVLKVAQGNVVAARADIANLQATLIRQDSLIAGARAAVLADDAQLAFA 131

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+D    +NL    A     + Q++R   ++       + ++ ++     E         
Sbjct: 132 QQDEARYRNLAAGGA---GTMEQRQRTAAQTREATAAKVRDEASVQAATQEKDV------ 182

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                 ++  + + +        +    E      TI +P+ G +V  +     NY    
Sbjct: 183 ------LAAQIARARGNLTRAEGEEQRAELDLSYCTIPAPVDG-VVGARGVRVGNYVNPG 235

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             LM + P      + A     Q+ HV  G  ATV    +     +  +A ++ I P   
Sbjct: 236 SALMAVTPVQDAFVV-AHFQETQLTHVLPGQKATVWVDTFP---GQPLRAHVDSIPPATG 291

Query: 375 ---SQQDNNLQTQEYYEVILKITDLAFSDNNIELRN----GFPAEVLFTAKNT 420
              +    +  T  + +V+ ++      D    L      G   EV     + 
Sbjct: 292 VAFAPIQPDNATGNFTKVVQRLPVRITFDPGQPLAARVRVGMSVEVAVDTASR 344



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 70/219 (31%), Gaps = 22/219 (10%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL------NEDNVVEIKSPFSGIIKKFQ 71
           K + L + + ++G   W      +  V   G  +             +     G I    
Sbjct: 6   KALLLAAGVVVLGAAAWGG----DRLVLGDGVRIETNDAYVSAYSSVVAPKVGGRIDAVM 61

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            ++  Q+ +G  L   ED +   ++ + + ++   R  I   ++ L   ++       A 
Sbjct: 62  AQDNEQVRKGEVLAHIEDDDYRAVLKVAQGNVVAARADIANLQATLIRQDSLIAGARAAV 121

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            + + QL           +       +   R      TR  +    R +   +++     
Sbjct: 122 LADDAQLAFAQQDEARYRNLAAGGAGTMEQRQRTAAQTREATAAKVRDEASVQAATQEKD 181

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +            L  + A ++ +L + E    ++ L+L
Sbjct: 182 V------------LAAQIARARGNLTRAEGEEQRAELDL 208


>gi|156741746|ref|YP_001431875.1| secretion protein HlyD family protein [Roseiflexus castenholzii DSM
           13941]
 gi|156233074|gb|ABU57857.1| secretion protein HlyD family protein [Roseiflexus castenholzii DSM
           13941]
          Length = 541

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/304 (11%), Positives = 75/304 (24%), Gaps = 18/304 (5%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  ++     +    +            + +         +L+   T +    +      
Sbjct: 237 QDALMPLVLVTTPAGVQRLPNTVSDGAREHYYAQFVQAEAALRQAETALEQALVQAEQAR 296

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ------------NDLNQQERIVYKSTLEL 230
               +                   E     Q              L      +     +L
Sbjct: 297 QAEVVGVRQAELQVDSAQAALAKAEAGPTPQDMAAAETALANAQRLFDVVEAMRADPQQL 356

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR-EQ 289
           R  +   +           +A             +  Q       +        +   E+
Sbjct: 357 RAAVDAARAQQAIAEAQLAQARARLEMARNGARPEQIQAAEAQLAQARAAQRQIEVMIEK 416

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            T+ +P +G I+               PLM I        +   ++   I  V+ G TA 
Sbjct: 417 ATLRAPRSGIILSRPIH-EGEQVTPGMPLMTIG-SLDTVRLTVYISEADIGRVRLGQTAE 474

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           V    +       F+  +  I         N+QT++     +    +   + +  L+ G 
Sbjct: 475 VTVDSFPGR---VFRGTVTFIAQNAEFTPRNVQTRDERATTVFAVRIELPNADHALKPGM 531

Query: 410 PAEV 413
           PA+V
Sbjct: 532 PADV 535



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 83/299 (27%), Gaps = 29/299 (9%)

Query: 13  HPASLKRMTLLSIIGIIGLITW----SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           HP +   + LL I G+IG   W    S       +++ SG I  E+  V + +  +G  +
Sbjct: 2   HPRTRIVVPLLLITGLIGGGYWWFQQSAQAR-NGALTGSGTIEAEE--VLVTAEIAGRAQ 58

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDL-------------------KKVSIKNLRCH 109
           +   + GS++  G  L   +       +D                    +   I      
Sbjct: 59  RLFADEGSEVRVGQELAQIDTALLEAQLDQAKAAVAAAEANLAQIRAGTRSEEIAIAEAQ 118

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREE---QLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +   ++A       Y+       +  E   QL        S    +      +    +  
Sbjct: 119 VKQAEAAAAGAARAYEHALAILNNPRELDLQLAQARANRDSALRALEQLRAGTRQEDIDA 178

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
               +     N     +K S  + L  +  +         +          +  R   + 
Sbjct: 179 ARAALALAQENLHAARDKLSAAKTLAEAQVEQAAAALTQAQARYAQAKSNWEYVRDTGQD 238

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
            L     +     + R  N + D A   +     +    L Q +      + +     +
Sbjct: 239 ALMPLVLVTTPAGVQRLPNTVSDGAREHYYAQFVQAEAALRQAETALEQALVQAEQARQ 297


>gi|187478681|ref|YP_786705.1| multidrug resistance protein A [Bordetella avium 197N]
 gi|115423267|emb|CAJ49800.1| multidrug resistance protein A [Bordetella avium 197N]
          Length = 395

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 47/417 (11%), Positives = 119/417 (28%), Gaps = 80/417 (19%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
              HPA  + +     + ++  + + +          S+ +     N+V+I     G + 
Sbjct: 4   PTTHPARKRLLLSAGGVFLVLALGYGAWWALYGSHFESTDDAYVRGNLVQITPQVPGTVI 63

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             + ++  ++  G PL+  +  +T        +++++    +      +  L  + D L 
Sbjct: 64  AIETDDTDKVEAGQPLVRLDPSDTD-------IALQDAEARLAQTVRKVHTLYVQNDSLA 116

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E R+ ++       +   S                                      
Sbjct: 117 ADVEVRQAEIARAQADLNRAQS-------------------------------------- 138

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                    DL   + L     VS  +L   E +V  +   L +      +    +    
Sbjct: 139 ---------DLKRRQALSASGGVSGEELLHAETMVKTAQSGLAQARAALASAQAKLTTNQ 189

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                       ++ +     +  +               +  + +P+ G +   +S   
Sbjct: 190 SLTRGTTVENHPDVLQAAANLRNAWLAS-----------SRTVLPAPVDGLVAR-RSVQV 237

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                    LM +VP     ++ A     Q++H++ G   T+    Y    +  +   I 
Sbjct: 238 GQRVAPGAVLMNVVPLD-QVWVDANFKEGQLRHMRVGQPVTMTADLYGSSVQ--YHGKIV 294

Query: 369 KID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +D          P+ +   N ++  +   V + +       + + +      EV  
Sbjct: 295 GMDAGTGSAFALLPVQNATGNWIKVVQRVPVRIALDPEELKKHPLRVGLSMNVEVDV 351


>gi|268317330|ref|YP_003291049.1| secretion protein HlyD family protein [Rhodothermus marinus DSM
           4252]
 gi|262334864|gb|ACY48661.1| secretion protein HlyD family protein [Rhodothermus marinus DSM
           4252]
          Length = 320

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 88/266 (33%), Gaps = 22/266 (8%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++             + L    +   +    E +       L   ++D   ++ L  +  
Sbjct: 74  QLRQAEADVAAARANLALLEAGARAEDLEQAEARRQQAETRLEQARRDAARLETLHAQG- 132

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                 +  +R +  + L+LR    E +     + +L   A  E          +L   +
Sbjct: 133 ------SATDRQLEDARLQLRLAEAEYRAAQAQLEKLRHLARPE----------ELAVAR 176

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A   ++  +L +  +   + +P  G +V  +       A     L+ +V      Y+
Sbjct: 177 ARVAQAEARRDLLRRQLDDACLEAPTDG-VVSRRVADPGELAAPGSVLLTLV-RLDTVYV 234

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           +  +    I  ++ G   TVR   + D     F+  +  I P       N+QT+E    +
Sbjct: 235 QLYIPEPLIGAIRYGQPVTVRVDTWPDR---SFEGHVTYIAPEAEFTPRNVQTKEDRTRL 291

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFT 416
           +    +   +    L+ G PA+    
Sbjct: 292 VFRIKVTLPNPEGLLKPGMPADATLQ 317



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 16/175 (9%), Positives = 57/175 (32%), Gaps = 7/175 (4%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G ++ +G PL+  +  +    +   +  +   R ++   ++         D+ +   
Sbjct: 51  VDEGDRVARGQPLVCQDTTQLVLQLRQAEADVAAARANLALLEAGARA----EDLEQAEA 106

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             ++ +      +  +   +  +   S+  R L+    ++R         + +   LR L
Sbjct: 107 RRQQAETRLEQARRDAARLETLHAQGSATDRQLEDARLQLRLAEAEYRAAQAQLEKLRHL 166

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
               +  +   +    +   ++ DL +++             +  +      +  
Sbjct: 167 ARPEELAVARARVAQAE---ARRDLLRRQLDDACLEAPTDGVVSRRVADPGELAA 218


>gi|217978577|ref|YP_002362724.1| secretion protein HlyD family protein [Methylocella silvestris BL2]
 gi|217503953|gb|ACK51362.1| secretion protein HlyD family protein [Methylocella silvestris BL2]
          Length = 395

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/356 (11%), Positives = 102/356 (28%), Gaps = 71/356 (19%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            SL R+ LL    +I    +  L   +I  +       +   V I    SG++    V +
Sbjct: 55  RSLLRIGLLIFAALIAGGGYLYLSTRDIQSTDDA--FTDGRAVTIAPQVSGLVVSLDVTD 112

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  ++  +        D       + +  ++  ++ L+ L    ++  K F   
Sbjct: 113 NQFVRKGDAMIHIDPRRYLQDRD-------SAKGALEIARAQLEGLKLGVEIARKNFP-- 163

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                                  + + ++     +   +      D + + SL +   + 
Sbjct: 164 -----------------------AQLEQAKAQLASAQAAAAKADADYQRQKSLPKQATT- 199

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
                                    ++ V  +T  LR+   +       ++         
Sbjct: 200 -------------------------QQEVDAATASLRQAQAQVMLAQAQLDAATP----- 229

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
               + +   D+ +         ++L       E   + +P  G I         +Y   
Sbjct: 230 VPQRIGQADADVGRLTGQVEQAQAQLDQANLNLEWTVVRAPQDGWITKRNV-EVGSYVTP 288

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
            Q +  IV      ++ A     Q+  ++ G    +    Y  ++    K  ++ I
Sbjct: 289 GQSIFSIVSPD--VWVTANFKETQLDRIRPGQEVDIEIDAYPQLK---LKGHVDSI 339


>gi|78186944|ref|YP_374987.1| putative ABC transport system, lipoprotein [Chlorobium luteolum DSM
           273]
 gi|78166846|gb|ABB23944.1| putative ABC transport system, lipoprotein [Chlorobium luteolum DSM
           273]
          Length = 302

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 91/291 (31%), Gaps = 32/291 (10%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V+      R  +     G      +       + +  SL     + +++   +  L  +S
Sbjct: 42  VVSSETAGRLLEFPLEEGDRLKKGALTAIIDTTQLQFSLLQLEAQQKALEAKKPSLSAES 101

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            + R    + Q D+     L    A     L            ++R  +   +  ++ +N
Sbjct: 102 GVYRQKRRNLQHDVERYTRLVADGAAPAKQLE-----------DIRNEVKVMERQIQSVN 150

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               E N E                       +++  L     + TI SPI GT++  + 
Sbjct: 151 SRTPEINAE------------------LQSMEARICQLRDQIGRSTIRSPIEGTVLA-KY 191

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                     +PL +I       Y+RA V  +Q+  ++ G    V           + + 
Sbjct: 192 AEPGELVSPGKPLYRIA-DLDNMYLRAYVGARQLPSIRIGQEVDVLIDGRKPADS-RLRG 249

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            I  I          +QT+E    ++    +   + N  L+ G P E+   
Sbjct: 250 TITWISSKAEFTPKIIQTREDRINMVYALKILVKNPNGILKIGMPGEMRLK 300



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 62/181 (34%), Gaps = 8/181 (4%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            HP+ + R  +L +   IGL   S       +  + G    E   V + S  +G + +F 
Sbjct: 2   KHPSPIARRAILGVTLTIGLAGCSGQ----SASDAYGNF--ESTEVVVSSETAGRLLEFP 55

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           +E G ++ +G      +  +    +   +   K L     +  +       K   L+   
Sbjct: 56  LEEGDRLKKGALTAIIDTTQLQFSLLQLEAQQKALEAKKPSLSAESGVYRQKRRNLQHDV 115

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E     + D  G   +   +     +  + R ++   +R   I      +E +   LR  
Sbjct: 116 ERYTRLVAD--GAAPAKQLEDIRNEVKVMERQIQSVNSRTPEINAELQSMEARICQLRDQ 173

Query: 192 L 192
           +
Sbjct: 174 I 174


>gi|88809000|ref|ZP_01124509.1| possible membrane fusion protein [Synechococcus sp. WH 7805]
 gi|88786942|gb|EAR18100.1| possible membrane fusion protein [Synechococcus sp. WH 7805]
          Length = 359

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 92/282 (32%), Gaps = 25/282 (8%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYL-NRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             +K+ NY  ++   +L   +T    +    R+++  K   L   L   + D      + 
Sbjct: 26  RENKLANYTATAERGTLPGVITASGELEAIRRVNVSPKRQGLLDALFVDEGDAVTKGQVL 85

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            +  +   D   ++  +     + R +   ++       +L D   +  ++ L       
Sbjct: 86  ARMEI--GDFTDRKDELSALERQARADYEAKRADYLRYRKLKDSGAISASD-LDGFRAAF 142

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPL 318
             ++   A    ++   +    +  I +P +G I   +      +               
Sbjct: 143 LSSKEALAAARERIQQRDVEGSELLIRAPFSGVITE-RFAEPGAFVTPTTTASANAGATS 201

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             IV  S+   + AKV    I  +  G  A+VR   + D R     A +  I P   + D
Sbjct: 202 ASIVELSEGLEVVAKVPENDIGRILVGQNASVRVDAFPDQRFP---ARVRDIAPRAEKTD 258

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           N +  +          +L   D    LR G   +V F    T
Sbjct: 259 NVISFEV---------ELTLIDPPPTLRIGMTVDVDFQTGRT 291



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 5/134 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   +++SGE+      V +     G++    V+ G  + +G  L   E  + TD  D  
Sbjct: 42  LPGVITASGELEAI-RRVNVSPKRQGLLDALFVDEGDAVTKGQVLARMEIGDFTDRKD-- 98

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++S    +   D E    D+L  +   L+ +       L  F   + S+   +       
Sbjct: 99  ELSALERQARADYEAKRADYLRYRK--LKDSGAISASDLDGFRAAFLSSKEALAAARERI 156

Query: 160 VYRSLKMKLTRMRS 173
             R ++     +R+
Sbjct: 157 QQRDVEGSELLIRA 170


>gi|327393267|dbj|BAK10689.1| multidrug resistance protein A EmrA [Pantoea ananatis AJ13355]
          Length = 381

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/357 (10%), Positives = 98/357 (27%), Gaps = 75/357 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E N V I +  SG + K  V +  ++ +G  L+  +  +        K  +         
Sbjct: 77  EGNAVTIAAKASGYVFKLLVNDNQRVRKGDLLVEIDPSDNEAQRAQAKAQLGLATA---- 132

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                                 + QL     +Y +   +       +    +  +    R
Sbjct: 133 -----------------QLHQAQAQLALSRVQYPAQRDQALADQAKAEANYMNAQADYRR 175

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                                              +    +      +R +  ++ +LR 
Sbjct: 176 Q----------------------------------RGVDPRA---TSQRNIDSASAQLRS 198

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + ++    +     E   + A  +++   ++E  Q       ++L + E       +
Sbjct: 199 AQAQLQSAKAQV-----EVASQVALQIRQQETNVEARQEQVEQAKAQLNVAELNLSYTQV 253

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +            Q    L  +V      +I A     Q++ +  G    +  
Sbjct: 254 RAPYDGFVTKRNV-QMGTLVQAGSALFSLVSPD--IWITANFKESQLERMNPGDKVAISV 310

Query: 353 PHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             + D++    +  ++ I         +    N     Y +++ ++      D  ++
Sbjct: 311 DAWPDMK---LEGHVDSIQMGTGSRFSTFPSENATGN-YVKIVQRVPVKIVIDKGLD 363


>gi|116327712|ref|YP_797432.1| membrane efflux protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331627|ref|YP_801345.1| membrane efflux protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120456|gb|ABJ78499.1| Membrane efflux protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125316|gb|ABJ76587.1| Membrane efflux protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 476

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 57/396 (14%), Positives = 138/396 (34%), Gaps = 61/396 (15%)

Query: 37  LLPIEISVSSSGEILNED----NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           L  I+   SSSG  +          E+ S   G I+++  E G  +L G  L   E +  
Sbjct: 50  LAKIDPGESSSGLKVLGSVSFFKKAEVTSKILGRIQQYFKEEGDSVLAGDVLAKMETL-- 107

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                       NL   +  ++S+++    + D+        ++++   L       + V
Sbjct: 108 ------------NLEIQLSKDQSSVEVQTRQRDLASAKLLIAKQRVDRELANIEKAEADV 155

Query: 153 FNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     +++ RS + K     +  ++  +L++  + L +   S  K    + +L +   
Sbjct: 156 RDSREIRNNLLRSAENKKKLNEAGAVSETELKSVETSLNSAEISLFKAEKNLASL-KMGY 214

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +         + K+ +++ +N  E K     +N + +             + +L+  +
Sbjct: 215 RPE--------DLNKANIQIPKNKSELKEAYIKLNTMIE-------------NAELDMAE 253

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
             F   +  +   +   ++  I SP++GT+   +        +  + L  IV  +    +
Sbjct: 254 ANFKSTLKNMESTQLLLKESNIKSPLSGTVAS-RIKEQGEAVKGGEAL-YIVVDTSKVIL 311

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           +  +   ++  +KK          Y       F+  +  I PI+  Q             
Sbjct: 312 KFNIGESELWKLKKDQKVNFIVDAYPGQN---FEGKVYIISPIVDPQSRT---------- 358

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN---TTLA 423
           +++  +A ++  + L+ G         +     T  
Sbjct: 359 VEVKVIAQNEKKL-LKPGMFTRGYILLEEARKKTFL 393


>gi|163848932|ref|YP_001636976.1| secretion protein HlyD family protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222526885|ref|YP_002571356.1| secretion protein HlyD family protein [Chloroflexus sp. Y-400-fl]
 gi|163670221|gb|ABY36587.1| secretion protein HlyD family protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450764|gb|ACM55030.1| secretion protein HlyD family protein [Chloroflexus sp. Y-400-fl]
          Length = 517

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 114/333 (34%), Gaps = 23/333 (6%)

Query: 91  ETTDLIDLKKVSIKNLR--CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +    +++++ ++   +    +   ++A    + +    +  +E+RE +    L K+   
Sbjct: 202 QAEANLNIQRTNLSAAKSNAELQMLQAANALRDAQQAYSDLYWENRERE--QQLAKFGLE 259

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFE 207
             K        + R+++    R +   L      +N+   + A  +  +   + ++ L +
Sbjct: 260 LPKEAKDAEEQLLRAVESAEARYKQTQLAYEQARQNEIDGIAAAEAQLRSAQSNLQRLLD 319

Query: 208 KNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
                            ++TLE LR +                +ANLE        +++L
Sbjct: 320 GPTADLIAAADAAVAQAQATLERLRGDQRAGALAAAQAGVAAAQANLERITAPP-TAQNL 378

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHS 325
              +       + L   +   E+  + +P AG +         + A     P+++IV  +
Sbjct: 379 AAAEAAVKIAEAALAAAKLNLEKAVLRAPFAGVVAQVNVD-PGDLAGTGALPVVQIV-DA 436

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
              Y+ A ++   I  V++G    VR           F   ++ + P+ +   N      
Sbjct: 437 SELYVEAAISDTDIARVREGQKVEVRLDALPGT---VFTGTLDFVAPVANAVGNVRT--- 490

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            + V +K+          ELR G    +     
Sbjct: 491 -FTVRVKLDRQE------ELRAGMSVRITILTD 516



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/261 (11%), Positives = 83/261 (31%), Gaps = 23/261 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I + V++SGE++   +  E+     G++ +  V  G  +  G PL+  +  E    +   
Sbjct: 60  ISLGVTASGEVVARSSA-ELSFRIPGVVAEVFVNEGDTVQAGDPLVALDARELELQVAQA 118

Query: 100 KVSIKNLRCHIDTEKSALD-----------------FLNNKYDVLEKAFESREEQLLDFL 142
           + S+   R + +                            +  V E    + E  L   +
Sbjct: 119 EASLAQARANYERLLEGATPEEIAAVRAQVAQAQAALRQARGSVTEADIAAAEAALAQAI 178

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD-LTM 201
            + +       N  +++   +++     +     N    ++ + L     ++  +D    
Sbjct: 179 ARRNDLLDGPNNAELTAARAAVEQAEANLNIQRTNLSAAKSNAELQMLQAANALRDAQQA 238

Query: 202 MKNLFEKNAVSQNDL----NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             +L+ +N   +  L     +  +    +  +L   +   +   +     Y++A     +
Sbjct: 239 YSDLYWENREREQQLAKFGLELPKEAKDAEEQLLRAVESAEARYKQTQLAYEQARQNEID 298

Query: 258 YLKEISRDLEQNQRTFADEMS 278
            +      L   Q      + 
Sbjct: 299 GIAAAEAQLRSAQSNLQRLLD 319


>gi|301346908|ref|ZP_07227649.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB056]
 gi|301511511|ref|ZP_07236748.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB058]
 gi|301595889|ref|ZP_07240897.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB059]
          Length = 353

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 29/284 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  + K   +RA     
Sbjct: 83  QVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVEQVRAQYELS 142

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              L   + L    A S+++         K+  +   N+   K    ++        L  
Sbjct: 143 LAQLRRYQQLGNSGAASKSE-------QDKAAADAENNLAALKQAEANV--------LVA 187

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              LK         +   +   ++L   + T++   I++P+ G  +   +     Y    
Sbjct: 188 KEALKTAQVAEAGLEAQVSSAKAQLDQAQTTKDYSVIVAPMDGQ-LGEVNPRVGQYVAAG 246

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P        A     QI +++ G  A         ++ KKF   +E+I P   
Sbjct: 247 SQLLYLIPQQTWVI--ANFKETQIANMRIGQKAWFTVDA---MKHKKFTGHVEQISPAAG 301

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPA 411
            +      +  T  + +V+    ++IT     +    LR G   
Sbjct: 302 SEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGMEHLRPGMSV 345



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 92/270 (34%), Gaps = 13/270 (4%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P     +  +  + IIG++   W+  + P   SV  +     +     + S  +G +K  
Sbjct: 12  PTKRSTLLWMLGVLIIGILVILWAWRIGPFATSVQQTDNSYVKGKTTILSSQINGYVKDV 71

Query: 71  QVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            V++   + +G  L+  +         +    ++  K ++ N    I  +++ +     K
Sbjct: 72  LVKDFDHVKKGQVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAK 131

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            + +   +E    QL  +    +S  +       ++        L  ++    N L  + 
Sbjct: 132 VEQVRAQYELSLAQLRRYQQLGNSGAASKSEQDKAAADAE--NNLAALKQAEANVLVAKE 189

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   +  +  ++  K   ++   ++ D +     +     E+   + +       
Sbjct: 190 ALKTAQVAEAGLEAQVSSAKAQLDQAQTTK-DYSVIVAPMDGQLGEVNPRVGQYVAAGSQ 248

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  L  +     AN+ +    ++   Q+ +
Sbjct: 249 LLYLIPQQTWVIANFKETQIANMRIGQKAW 278


>gi|293609118|ref|ZP_06691421.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829691|gb|EFF88053.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 372

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 91/285 (31%), Gaps = 31/285 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  + K   ++A     
Sbjct: 102 QVLMHIDATTYDQKVTQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVDQVKAQYELS 161

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLE 254
              L   + L    A S+++ ++       +   L++           +      EA LE
Sbjct: 162 LAQLRRYQQLGNSGAASKSEQDKAAADAENNLAALKQAEANLLVAKEALKTAQVAEAGLE 221

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                              +   ++L   + T++   I++P+ G  +   +     Y   
Sbjct: 222 ----------------AQVSSAKAQLDQAQTTKDYSVIVAPMDGQ-LGEVNPRVGQYVAA 264

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              L+ ++P        A     QI +++ G  A         ++ KKF   +E+I P  
Sbjct: 265 GSQLLYLIPQQTWVI--ANFKETQIANMRIGQKAWFTVDA---MKHKKFTGHVEQISPAA 319

Query: 375 SQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPA 411
             +      +  T  + +V+    ++IT     +    LR G   
Sbjct: 320 GSEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGMEHLRPGMSV 364



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 94/270 (34%), Gaps = 13/270 (4%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P     +  + ++ I+G++   W+  + P   SV  +     +     + S  +G +K  
Sbjct: 31  PTKRSTLLWMLVVLIVGILVILWAWRIGPFATSVQQTDNSYVKGKTTILSSQINGYVKDV 90

Query: 71  QVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            V++   + +G  L+  +         +    ++  K ++ N    I  +++ +     K
Sbjct: 91  LVKDFDHVKKGQVLMHIDATTYDQKVTQAASGVEQAKNTLANQTQSIAQKQADIVAAQAK 150

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D ++  +E    QL  +    +S  +       ++        L  ++    N L  + 
Sbjct: 151 VDQVKAQYELSLAQLRRYQQLGNSGAASKSEQDKAAADAE--NNLAALKQAEANLLVAKE 208

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   +  +  ++  K   ++   ++ D +     +     E+   + +       
Sbjct: 209 ALKTAQVAEAGLEAQVSSAKAQLDQAQTTK-DYSVIVAPMDGQLGEVNPRVGQYVAAGSQ 267

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  L  +     AN+ +    ++   Q+ +
Sbjct: 268 LLYLIPQQTWVIANFKETQIANMRIGQKAW 297


>gi|167572867|ref|ZP_02365741.1| HlyD family secretion protein [Burkholderia oklahomensis C6786]
          Length = 330

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 86/253 (33%), Gaps = 26/253 (10%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKS-TL 228
            R   ++R +++ +++ + A  S+            E   VS + DL +++R   ++ TL
Sbjct: 89  RRQTDIDRANVDVQTAQVEANRSNVAA--------LEHGVVSDRFDLAEKQRDFARADTL 140

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISR-DLEQNQRTFADEMSKLTILEKTR 287
             +  + +Q   L    E    A L     L   +R D+           +K  + E T 
Sbjct: 141 ARQSAVSQQSRDLAQTAERQSAAALARDQALLAAARNDVALAAANVTAAQAKRKLDETTL 200

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               + +P  G I   +       A     +  I       ++RA V    +  ++ G  
Sbjct: 201 SYAALAAPFDGVI-SVRHAELGQLAGPGVAIFTIAELDH-VWLRAYVNEPDVGRIRIGEA 258

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-----EYYEVILKITDLAFSDNN 402
             VR   Y     +     I  + P        ++T      + Y + + I +       
Sbjct: 259 VDVRTDAYPSAVYR---GRISFVSPQAEFTPKTVETHEERITQVYRIRIDIDNPT----- 310

Query: 403 IELRNGFPAEVLF 415
            EL  G PA+   
Sbjct: 311 HELLPGMPADATI 323


>gi|284039260|ref|YP_003389190.1| secretion protein HlyD [Spirosoma linguale DSM 74]
 gi|283818553|gb|ADB40391.1| secretion protein HlyD family protein [Spirosoma linguale DSM 74]
          Length = 370

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 63/420 (15%), Positives = 129/420 (30%), Gaps = 69/420 (16%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
              + K    A L R+ +  ++ + G   +   +       ++     E N   + +  +
Sbjct: 9   ATTDEKSGIKAYLPRIIIALVLLVGGYFGYKAYVH-SQQYETTDNAQIEGNSAPVLARVA 67

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V++ + + +G PL+T +          ++  +   +   D ++S  D  N + 
Sbjct: 68  GYVTAVNVDDYANVKRGQPLVTIDP---------QEYDVALAQAEADYQQSLADLENARA 118

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D+      +R            +T   + N  + +  R       + R       +L  +
Sbjct: 119 DLQNAQANARNVA--------QNTRVALSNAQVQAARR------DKSRQDLQRDQNLYKE 164

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            SL R  L   Q +  +    +E N    N     + +      + + NI + + +L+  
Sbjct: 165 QSLTRKQLEDSQNNADVQGRQYEANVEQINLAKTSQGVAQAGIAKAQANIQKIQAVLKVK 224

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               D A L                                      + +PIAG I    
Sbjct: 225 QAAIDNAKLRVG--------------------------------YARLAAPIAGKIGRKN 252

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y Q  Q L  IV      ++ A     Q++ ++ G    ++   Y D+     K
Sbjct: 253 VV-VGQYVQPGQNLFTIV-ADSTFWVVANFKETQLEKMQLGQAVDIKLDAYPDL---DIK 307

Query: 365 AIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             I  +            +   +    +    V +KI  L       +LR G   +    
Sbjct: 308 GRISSLSDATGARFALLPADNASGNFVKITQRVPVKIEILNPEKYKDQLRAGLSVDAEVR 367


>gi|167644825|ref|YP_001682488.1| secretion protein HlyD family protein [Caulobacter sp. K31]
 gi|167347255|gb|ABZ69990.1| secretion protein HlyD family protein [Caulobacter sp. K31]
          Length = 358

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 89/296 (30%), Gaps = 35/296 (11%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+    + +          + +   +L   L    S        + ++   RA L+  
Sbjct: 87  QVLVQIDDRIYRQKLAQAAASVQAAQAALDANLQAQTSNAAQIRLAQAQAESGRAALAKA 146

Query: 196 QKDLTMMKNLFEKN--AVSQNDLNQ-QERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           Q D+   + L  +   A SQ D+ Q  +R       +   NI   +  L       +   
Sbjct: 147 QIDVRRAEPLLAQGWLAPSQRDVLQVAQRQASAGVAQTAANIDIARQALATTKVNRESLQ 206

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              AN    +                   +        TI +P  G +          Y 
Sbjct: 207 ASLANAQAAVE------------------LARIDLANTTIRAPEDGAVGEVGV-KLGQYV 247

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                LM +VP     ++ A     Q  H++ G  A VR      +     +  +E++ P
Sbjct: 248 PVGTLLMGVVPRET--WVTANFKETQTAHIRVGQRAVVRVDALGGMT---LRGHVERLGP 302

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVLFTAKNT 420
               +      +  T  + +V+ ++      D N E    LR G   E      + 
Sbjct: 303 AAGSEFAVIKPDNATGNFTKVVQRLPVRIVLDPNQEGVARLRPGMSVEARVDTADR 358



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 20/179 (11%), Positives = 50/179 (27%), Gaps = 3/179 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V++   +  G  L+  +D      +     S++  +  +D    A      + 
Sbjct: 70  GYVTAVTVKDFETVRAGQVLVQIDDRIYRQKLAQAAASVQAAQAALDANLQAQTSNAAQI 129

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + +   ES    L             +    ++   R +       R            
Sbjct: 130 RLAQAQAESGRAALAKAQIDVRRAEPLLAQGWLAPSQRDVLQ--VAQRQASAGVAQTAAN 187

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + R  L++ + +   ++     NA +  +L + +             + E    L  
Sbjct: 188 IDIARQALATTKVNRESLQASLA-NAQAAVELARIDLANTTIRAPEDGAVGEVGVKLGQ 245


>gi|107104259|ref|ZP_01368177.1| hypothetical protein PaerPA_01005333 [Pseudomonas aeruginosa PACS2]
          Length = 400

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 86/269 (31%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + ++R ++ N      + +  +  L+  + D    KNL +  A+SQ +
Sbjct: 101 ALQRAEANLAHTVRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQEE 160

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   L  +    +  L     L D+  +     +K  +  L Q     A 
Sbjct: 161 LAHARDALDSAKASLTSS----EQQLNTNRALVDDTQITSHPDVKAAAAQLRQAYLDDA- 215

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        + TI++P+ G +   +S       Q    LM +VP     +I A   
Sbjct: 216 -------------RSTIVAPVTGYVAK-RSVQVGQRVQPGTALMAVVPLD-QIWIDANFK 260

Query: 336 PKQIQHVKKGYTATVRFPHY--ADIREKKFKAI-IEKIDPIISQQDNNLQTQ-----EYY 387
             Q++H++ G    +R   Y           ++ +            N         +  
Sbjct: 261 ETQLKHMRIGQPVEIRSDLYGSDVRYSGTVDSLGVGTGSAFSLLPAQNATGNWIKIVQRV 320

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + I       + + +      +V   
Sbjct: 321 PVRIHIDPQELQKHPLRIGLSMDVKVDLH 349



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            NVV+I     G +     ++G  + +G  L+ F+  +         ++++    ++   
Sbjct: 60  GNVVQITPQIVGTVVSIGADDGDLVRKGQELVRFDPSDAD-------IALQRAEANLAHT 112

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              +  L +  D       +R+  L      Y    +   +  IS     L      + S
Sbjct: 113 VRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQ--EELAHARDALDS 170

Query: 174 IYLNRLDLENKSSLLRALLSSHQ 196
              +    E + +  RAL+   Q
Sbjct: 171 AKASLTSSEQQLNTNRALVDDTQ 193


>gi|253988775|ref|YP_003040131.1| hemolysin secretion protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780225|emb|CAQ83386.1| similarities with hemolysin secretion protein [Photorhabdus
           asymbiotica]
          Length = 404

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 104/309 (33%), Gaps = 30/309 (9%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           IK + V +G  I +G  +    + +  +   +   +IK     I+  +  +D +  +  +
Sbjct: 69  IKNYNVRDGDVIKKGDSIYNAINPDLEEAESILLQNIKRDNTKINAMEKYIDNVYERMKI 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                   E+   DF  K++   S++ N  I S+    +         Y  +++  +K  
Sbjct: 129 --------EKNYEDF--KFNKNESELKN--IDSILNDHRDDYDFFSQSYREQMNFVDKLL 176

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                  S +  +     LF     S+  L   E  +            EQ   +    +
Sbjct: 177 KHNNNYLSTKDIIKYKMELFS----SRRGLINLESDILDLEKRKYSLDDEQSRYIIGATK 232

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                  E    L ++  +L         + +++  ++  + +   ++   G + +N   
Sbjct: 233 YK-----ELDMELNQLRGELSVLVSELNVKNTRIESIKNGKLRIEGIAKADGKVEFNNIN 287

Query: 307 SSSNYAQQ-----SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                 +       + +  I P       +  V+ K I+ +K G +  ++   Y  ++  
Sbjct: 288 G----IRPKQVKKGELVFTIYPDGNHFIAKGVVSEKYIRKIKIGQSVELKMDAYDYLKYG 343

Query: 362 KFKAIIEKI 370
             K  +E I
Sbjct: 344 AIKGKVETI 352


>gi|332654440|ref|ZP_08420183.1| putative auxiliary transport protein, membrane fusion protein (MFP)
           family [Ruminococcaceae bacterium D16]
 gi|332516404|gb|EGJ46010.1| putative auxiliary transport protein, membrane fusion protein (MFP)
           family [Ruminococcaceae bacterium D16]
          Length = 567

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 47/401 (11%), Positives = 123/401 (30%), Gaps = 47/401 (11%)

Query: 49  EILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            + +   +  I S       +G + +   E G Q+ +G  L   +       +   ++S+
Sbjct: 100 SVSSTGTIQPIDSYNVSGMVTGEVLEAPFEVGDQVEKGDVLYRIDPGSAETALQQAQLSV 159

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEK---------AFESREEQLLDFLGKYHSTCSKVFN 154
           +  + + D+    L+   +   V++K         +  S    + D      +   +  +
Sbjct: 160 QQAQLNYDSIVDGLNPKASGAGVVQKLHVKKGDLVSAGSPIADISDTSTMTLTVPFQSAD 219

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN---------- 204
               +V  S ++ L          ++    + L+    +  ++    ++N          
Sbjct: 220 AQRIAVGSSAQVTLAGTLETLTGTVESVANADLVGNGGALVRQVKIRVQNPGALTTSTTA 279

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             +  +++       E  + ++ +       E  ++            +           
Sbjct: 280 TAKVGSIACAGSGTFEANLTQTVVATGS--GEVVSLNVSAGSRVSAGQVLATLGGSSAQT 337

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPL 318
            LE    +  +    L   +   +  TI +PI+GT++  ++F + +             L
Sbjct: 338 SLENASISLQNAQLSLQNAQDALDNYTITAPISGTVIE-KNFKAGDTIDNNSLTAAGGTL 396

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             +           K+  K I  V+ G   T+       +    F  +++ ++       
Sbjct: 397 AVLY-DMSTLTFEMKIDEKDINKVQVGQEVTI--TA-DAVEGVTFSGVVDTVNI----NG 448

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +  Q  Y V + I D        +L+ G         + 
Sbjct: 449 TTVSGQTNYPVTVVINDPQ------DLKPGMNVSADIIVER 483


>gi|198274209|ref|ZP_03206741.1| hypothetical protein BACPLE_00349 [Bacteroides plebeius DSM 17135]
 gi|198272884|gb|EDY97153.1| hypothetical protein BACPLE_00349 [Bacteroides plebeius DSM 17135]
          Length = 354

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 56/385 (14%), Positives = 109/385 (28%), Gaps = 90/385 (23%)

Query: 48  GEILNEDNVVEIKSPF------SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           G +   DN    +          G IKK   E    + +G  L   ED E          
Sbjct: 43  GNVEYTDNAQVKQHLTPVSTRVQGFIKKICFEEYQTVKKGDTLAIIEDTEY--------- 93

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                   +   ++  D+ N                                        
Sbjct: 94  -------RLKVAQAEADYRNA--------------------------------------L 108

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                  T + +   N L  +      R  L + Q D    + L ++ AV+    ++ + 
Sbjct: 109 AGKSAMHTTINTTQNNILVTDAAIDEQRIRLQNAQTDYKRYQELLKEEAVTPQQFDRVKT 168

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               +     + + ++++ L    E                   LEQN+       + L 
Sbjct: 169 DYEATQARYEQLLRQKQSTLLQKQEQTQR---------------LEQNESAIKLAEAALN 213

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           + +       IL+   G +   ++       Q  Q L+ +V      ++ A     Q   
Sbjct: 214 LAKLNLSYTVILATTDG-VTGRKNIHEGELVQPGQALVTLV-DGTEKWVIANYKETQTTD 271

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVIL 391
           +K+     VR     D++   F+  I  I           P  +   N ++ ++   V +
Sbjct: 272 MKRNQLVEVRVDAIPDVK---FEGRIASISDATGASYSLIPQNNSAGNFVKVEQRIPVRI 328

Query: 392 KITDLAFSDNNIELRNGFPAEVLFT 416
           + T+    ++   LR G   E    
Sbjct: 329 EFTENNRPEDLQRLRAGMNVECYVK 353


>gi|114561685|ref|YP_749198.1| secretion protein HlyD family protein [Shewanella frigidimarina
           NCIMB 400]
 gi|114332978|gb|ABI70360.1| secretion protein HlyD family protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 364

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 94/280 (33%), Gaps = 16/280 (5%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +     S     L      + S   N   L  K  L +AL++  +  +   ++   +  +
Sbjct: 71  LAQLEDSQFVAKLAQSKAVLASTQANLQTLAAKVDLQQALINQAKATVVASQS---EQLI 127

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS---RDLEQ 268
           +Q  L + +++   +    + ++ + +      +   DEA        +E+S     L Q
Sbjct: 128 AQQQLKRSQKLKISNYSS-QNDVDQLQAGFDSASAHVDEAQAALVAKQRELSVFNAQLLQ 186

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            Q      M+ + +         + +P +G I   +      Y Q  Q L  +VP     
Sbjct: 187 VQADVDQAMASVELANIQLVDTRVTAPFSGII-GKRGAMVGQYVQPGQALFSLVP-DAQV 244

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF-------KAIIEKIDPIISQQDNNL 381
           +I A     QI+H++ G    V    Y D     F             + P  +   N  
Sbjct: 245 WITANFKETQIEHMQAGQAVKVSLDAYPDYVFSGFIDSLAPASGSKFSLLPAENATGNFT 304

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           +  +   V +++     S     +  G  A V    ++ T
Sbjct: 305 KIVQRIPVRIRLEHDQPSSAIGRILPGLSALVEVDTESAT 344



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 93/264 (35%), Gaps = 7/264 (2%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           ++ ++ + G+  WS +  IE + ++   +  + + + +K P  G I +  V +   + +G
Sbjct: 13  IIVVLVVAGVYWWSQVRYIESTDNA--YVEADISNISVKVP--GYIVQSTVVDNQHVNKG 68

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L   ED +    +   K  + + + ++ T  + +D      +  +    + + + L  
Sbjct: 69  ELLAQLEDSQFVAKLAQSKAVLASTQANLQTLAAKVDLQQALINQAKATVVASQSEQL-- 126

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           + +     S+       S    +        S   +  + +      +  LS     L  
Sbjct: 127 IAQQQLKRSQKLKISNYSSQNDVDQLQAGFDSASAHVDEAQAALVAKQRELSVFNAQLLQ 186

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           ++   ++ A++  +L   + +  + T      I ++  M+    +          +    
Sbjct: 187 VQADVDQ-AMASVELANIQLVDTRVTAPFSGIIGKRGAMVGQYVQPGQALFSLVPDAQVW 245

Query: 262 ISRDLEQNQRTFADEMSKLTILEK 285
           I+ + ++ Q         + +   
Sbjct: 246 ITANFKETQIEHMQAGQAVKVSLD 269


>gi|152971541|ref|YP_001336650.1| multidrug resistance secretion protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238896138|ref|YP_002920874.1| multidrug resistance secretion protein [Klebsiella pneumoniae
           NTUH-K2044]
 gi|262043927|ref|ZP_06017015.1| multidrug resistance protein A [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330013355|ref|ZP_08307626.1| multidrug resistance protein A [Klebsiella sp. MS 92-3]
 gi|150956390|gb|ABR78420.1| multidrug resistance secretion protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|238548456|dbj|BAH64807.1| multidrug resistance secretion protein [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|259038781|gb|EEW39964.1| multidrug resistance protein A [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328533543|gb|EGF60266.1| multidrug resistance protein A [Klebsiella sp. MS 92-3]
          Length = 390

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 89/277 (32%), Gaps = 34/277 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     L   + + R   +N   L+    + +  L+  Q DL     L   N + +
Sbjct: 98  QQAFEKAKTQLAASVRQTRQQMINSKQLQANIDVKKTALAQAQADLNRRIPLGAANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  EL   I +       +     E          E+           
Sbjct: 158 EELQHARDTVASAQAELDVAIQQYNANQAIVLGTRLEQQPAVLQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         ++  I+SPI+G +   +S         + PLM +VP +   +I A 
Sbjct: 212 ------------ALQRTQIVSPISGYVSR-RSVQPGAQIGTTTPLMAVVPATN-LWIDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ H++ G  ATV    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQLAHMRIGQPATVISDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +   V +++ +   +++ + +  G    V     + 
Sbjct: 316 VQRLPVRIELDEKQLAEHPLRI--GLSTLVEVNTTDR 350



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 54/160 (33%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  +G + K   +N   + +G PL+T +  +     +  K  +        
Sbjct: 57  VAGNQVQIMAQVAGSVTKVWADNTDYVQKGDPLVTLDRTDAQQAFEKAKTQLAASVRQTR 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            +      L    DV + A    +  L     LG  +    +   +   +V  +      
Sbjct: 117 QQMINSKQLQANIDVKKTALAQAQADLNRRIPLGAANLIGREELQHARDTVASAQAELDV 176

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+       LE + ++L+A        L + + 
Sbjct: 177 AIQQYNANQAIVLGTRLEQQPAVLQAATEVRNAWLALQRT 216


>gi|260551009|ref|ZP_05825214.1| secretion protein HlyD [Acinetobacter sp. RUH2624]
 gi|260405957|gb|EEW99444.1| secretion protein HlyD [Acinetobacter sp. RUH2624]
          Length = 387

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 90/284 (31%), Gaps = 29/284 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  + K   ++A     
Sbjct: 117 QVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVDQVKAQYELS 176

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              L   + L    A S+++         K+  +   N+   K    ++        L  
Sbjct: 177 LAQLRRYQQLGNSGAASKSE-------QDKAAADAENNLAALKQAEANV--------LVA 221

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              LK         +   +   ++L   + T++   I++P+ G  +   +     Y    
Sbjct: 222 KEALKTAQVAEAGLEAQVSSAKAQLDQAQTTKDYSVIVAPMDGQ-LGEVNPRVGQYVAAG 280

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P        A     QI +++ G  A            KKF   +E+I P   
Sbjct: 281 SQLLYLIPQQTWVI--ANFKETQIANMRIGQKAWFTVDAMN---HKKFTGHVEQISPAAG 335

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPA 411
            +      +  T  + +V+    ++IT     +    LR G   
Sbjct: 336 SEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGMEHLRPGMSV 379



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 93/270 (34%), Gaps = 13/270 (4%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P     +  +  + IIG++   W+  + P   SV  +     +     + S  +G +K  
Sbjct: 46  PTKRSTLLWMLGVLIIGILVILWAWRIGPFATSVQQTDNSYVKGKTTVLSSQINGYVKDV 105

Query: 71  QVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            V++   + +G  L+  +         +    ++  K ++ N    I  +++ +     K
Sbjct: 106 LVKDFDHVKKGQVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAK 165

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D ++  +E    QL  +    +S  +       ++        L  ++    N L  + 
Sbjct: 166 VDQVKAQYELSLAQLRRYQQLGNSGAASKSEQDKAAADAE--NNLAALKQAEANVLVAKE 223

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   +  +  ++  K   ++   ++ D +     +     E+   + +       
Sbjct: 224 ALKTAQVAEAGLEAQVSSAKAQLDQAQTTK-DYSVIVAPMDGQLGEVNPRVGQYVAAGSQ 282

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  L  +     AN+ +    ++   Q+ +
Sbjct: 283 LLYLIPQQTWVIANFKETQIANMRIGQKAW 312


>gi|150376425|ref|YP_001313021.1| secretion protein HlyD family protein [Sinorhizobium medicae
           WSM419]
 gi|150030972|gb|ABR63088.1| secretion protein HlyD family protein [Sinorhizobium medicae
           WSM419]
          Length = 365

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 52/409 (12%), Positives = 124/409 (30%), Gaps = 85/409 (20%)

Query: 16  SLKRMTLLSIIG--IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
             K + L+  +G  ++    WS     E    S+       +V  +    +G +    VE
Sbjct: 27  RRKMIGLVLCLGSVVVVATGWSWTC--ENGAMSTDNAYVRGDVTALAPKVAGYVTAVGVE 84

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +   +  G  L   +D              ++ R  +    + ++               
Sbjct: 85  DNQAVRAGDILFRIDD--------------RDYRARLAQAVANVEA-------------- 116

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                                  +++V    +++   +R         E +     A L+
Sbjct: 117 -------------------AQARLTNVDAEKELQHALIRQA-------EAQRRSAIAELN 150

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              K     + L   N VSQ  +++ +    ++   +       +   + I  L  +   
Sbjct: 151 LASKAYDRRRELIRSNTVSQAHVDESDAARSRAEANVLAASATVEAQQQRIAVLAAQREA 210

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A   +  +                  + E   E   + +P+ G ++ N+         
Sbjct: 211 AVAAVAQAQAAR---------------ALAEIDLESTVVRAPV-GGVIGNRQVRVGRLVA 254

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              PL+ +VP   +  + A     Q++H++ G  A++    Y +      + +++   P 
Sbjct: 255 SGAPLLDVVPLDNVWIV-ANFKETQLEHLRPGQRASITIDGYPNA---VLEGVVDSFAPG 310

Query: 374 ISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNI--ELRNGFPAEVLF 415
                     +  T  +  V+ ++   + F+ + +   L  G  A V  
Sbjct: 311 SGTAFSLLPADNATGNFVRVVQRVPVKIRFAGSPLPGRLVPGLSARVEI 359


>gi|169634160|ref|YP_001707896.1| putative multidrug resistance efflux pump [Acinetobacter baumannii
           SDF]
 gi|169152952|emb|CAP01997.1| putative multidrug resistance efflux pump [Acinetobacter baumannii]
          Length = 381

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 29/284 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  + K   +RA     
Sbjct: 111 QVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVEQVRAQYELS 170

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              L   + L    A S+++         K+  +   N+   K    ++        L  
Sbjct: 171 LAQLRRYQQLGNSGAASKSE-------QDKAAADAENNLAALKQAEANV--------LVA 215

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              LK         +   +   ++L   + T++   I++P+ G  +   +     Y    
Sbjct: 216 KEALKTAQVAEAGLEAQVSSAKAQLDQAQTTKDYSVIVAPMDGQ-LGEVNPRVGQYVAAG 274

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P        A     QI +++ G  A         ++ KKF   +E+I P   
Sbjct: 275 SQLLYLIPQQTWVI--ANFKETQIANMRIGQKAWFTVDA---MKHKKFTGHVEQISPAAG 329

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPA 411
            +      +  T  + +V+    ++IT     +    LR G   
Sbjct: 330 SEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGIEHLRPGMSV 373



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 92/270 (34%), Gaps = 13/270 (4%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P     +  +  + IIG++   W+  + P   SV  +     +     + S  +G +K  
Sbjct: 40  PTKRSTLLWMLGVLIIGILVILWAWRIGPFATSVQQTDNSYVKGKTTILSSQINGYVKDV 99

Query: 71  QVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            V++   + +G  L+  +         +    ++  K ++ N    I  +++ +     K
Sbjct: 100 LVKDFDHVKKGQVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAK 159

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            + +   +E    QL  +    +S  +       ++        L  ++    N L  + 
Sbjct: 160 VEQVRAQYELSLAQLRRYQQLGNSGAASKSEQDKAAADAE--NNLAALKQAEANVLVAKE 217

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   +  +  ++  K   ++   ++ D +     +     E+   + +       
Sbjct: 218 ALKTAQVAEAGLEAQVSSAKAQLDQAQTTK-DYSVIVAPMDGQLGEVNPRVGQYVAAGSQ 276

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  L  +     AN+ +    ++   Q+ +
Sbjct: 277 LLYLIPQQTWVIANFKETQIANMRIGQKAW 306


>gi|302187959|ref|ZP_07264632.1| secretion protein HlyD [Pseudomonas syringae pv. syringae 642]
          Length = 385

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 50/423 (11%), Positives = 123/423 (29%), Gaps = 94/423 (22%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLIT----WS---ILLPIEISVSSSGEILNEDNVVEIKSP 62
            R+    +    +   + + G++     W       PIE + ++      +     I   
Sbjct: 29  PRSTRKRVVSSVIFGAVALAGVLVVLYAWQLPPFASPIESTENAQ----VKGQTTLIGPQ 84

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG + +  V++   +  G  L+  +D        + +  +      +  +K++L     
Sbjct: 85  LSGYVYEVPVQDFQFVKAGDLLVRLDD-------RIYRQRLDQANAQLAVQKASLANNLQ 137

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +    E     R+ +L + + +   + +                                
Sbjct: 138 QRRSAEATIGQRQAELQNSIAQSRKSAA-------------------------------- 165

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                          DL   + L    +VS+++L      V ++          +   + 
Sbjct: 166 ---------------DLRRNQALVTDGSVSKSEL-----DVTRAADAQANAAVAEARAVL 205

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I              L+ +  +    + + A+  + + +     +   I++P  G +  
Sbjct: 206 QIA----------REDLQTVIVNRGSLEASVANAQAAIELARIDLDNTRIVAPRDGQLGQ 255

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP  +     A +   Q+ +V+ G   +           ++
Sbjct: 256 IGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKETQMANVRLGQPVSFTVDALD---GQQ 309

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYY----EVILKITDLAFSDNNIELRNGFPAEVL 414
               +++I P    +      +  T  +      + ++IT  A       LR G    V 
Sbjct: 310 MHGHVQRISPAAGSEFSLLPADNATGNFVKISQRIPVRITVDADQPMLEHLRPGMSVVVS 369

Query: 415 FTA 417
              
Sbjct: 370 IDT 372


>gi|332701647|ref|ZP_08421735.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332551796|gb|EGJ48840.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 463

 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 96/284 (33%), Gaps = 33/284 (11%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY-LNRLDLENKSSLLRALLSSHQKD 198
           D +        +       +   S++ +L+R+R +Y L   + + +  L +A  +  Q +
Sbjct: 86  DLVAVIDDREQQAEQAETEARLASVQAELSRVRQVYPLQIAEAQAQLDLAQAQYAYAQAN 145

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               ++L  ++   Q+ L+Q  R +  S  EL       + +                  
Sbjct: 146 FKRQQDLVARDVQPQDILDQARRDLDVSRNELEARQATLRRL------------------ 187

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            +E  ++L + +R      + L  ++       I++PI+G +    +            +
Sbjct: 188 RQEFEQELTKARRAVDVAQATLRSIKVRISYTRIITPISGLVSQVTA-QEGETVVSGLQV 246

Query: 319 MKIVPHSKLTYIRA--KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
             +V     T +     V    +  VK G     R   Y   +E+ F+  IE+I P    
Sbjct: 247 TNLVTVIDPTRLEMWIYVDETDVGQVKPGMPVEFRVDAY---QERMFQGRIEQIYP---- 299

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +        YY  ++ +         + LR     +     +  
Sbjct: 300 EPEIRDNIVYYRALVPLDP----QQALALRPEMTTQCQIVVEQR 339


>gi|189347032|ref|YP_001943561.1| efflux transporter, RND family, MFP subunit [Chlorobium limicola
           DSM 245]
 gi|189341179|gb|ACD90582.1| efflux transporter, RND family, MFP subunit [Chlorobium limicola
           DSM 245]
          Length = 415

 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 78/218 (35%), Gaps = 20/218 (9%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           +++ + N      L  + R +       + ++  ++ ++   + L  + N + A+   E 
Sbjct: 107 QSMAQLNLAKAQSLEAKSRKIKAEDDFRKASLLFREKLISQTDFLAAKTNADAASASFEA 166

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPL 318
           S    +  R+  D+       +    +  I +PI GTI+   S +              +
Sbjct: 167 STYAIEQYRSLYDQN------QDRMRKTVIRAPIDGTIIKLNSKTGERVVGTGQFPGTEV 220

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-PIISQQ 377
           + +  +     +  +V    I +V+KG    +    + D     F+ ++ +I    ISQ 
Sbjct: 221 LGLA-NLDSMQVEVEVNENDIVNVRKGNPVAITVDAFGDRI---FRGVVHEISNSAISQA 276

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               +    + V ++I +         L+ G  A    
Sbjct: 277 AGTQEEVTNFSVKIRILNHMRL-----LKPGMSATADI 309



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 9/139 (6%)

Query: 43  SVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            V+++G+I  E  V    SP  SG I +  V++G Q+ +G  L   +     + ++    
Sbjct: 53  VVTATGKIEPETEVAM--SPDVSGEIIELPVKDGQQVRKGDLLFKIQPDVYINQVEQSMA 110

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +   +      KS      + +      F  +     DFL       +K      S+ +
Sbjct: 111 QLNLAKAQSLEAKSRKIKAEDDFRKASLLFREKLISQTDFLA------AKTNADAASASF 164

Query: 162 RSLKMKLTRMRSIYLNRLD 180
            +    + + RS+Y    D
Sbjct: 165 EASTYAIEQYRSLYDQNQD 183


>gi|291520615|emb|CBK75836.1| Membrane-fusion protein [Butyrivibrio fibrisolvens 16/4]
          Length = 462

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 114/388 (29%), Gaps = 80/388 (20%)

Query: 40  IEISVSSSGEILNEDNVVEIK----SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           ++ SVS +G +   D          S     +KK   E G  + +G  ++ F+  +    
Sbjct: 60  VQKSVSVTGTLNATDTAKVTSTIGGSMTGVKVKKINYEVGDYVEKGAVVVEFDGDDYDRK 119

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           I                       LN +Y++  K  E     L   +             
Sbjct: 120 ISE---------------------LNAQYNITNKESEVNIGDLNKKIADT---------- 148

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                           + I  ++  L+ K      L  ++ K L         N   + +
Sbjct: 149 ---------------QKQIEDDQKWLDEKKLYYDNLKDAYDKYLEHP------NYDDRKE 187

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFA 274
             + E  + +S       I   +     I  L D        Y  +I    L Q      
Sbjct: 188 RYESEAAICQSR--YNFTIETYEAKRDGIKTLQDS----IITYQNQIELAQLRQAFNQNY 241

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
            ++ +   + ++++   + +PI+G I+     +  N   Q   +  I   +    + A V
Sbjct: 242 TQVDEKDKIYESKDATHVEAPISGYILTMNV-TEGNNYAQGNTVFTIA-DTSEFIVEATV 299

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS-------QQDNNLQTQEYY 387
               I  +  G  A V+F    D     F   +  +            Q          Y
Sbjct: 300 NEYDIAKISTGLPAKVKFESTGDET---FDGEVTFVSLASEGSIGGNPQGQPAATGVASY 356

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLF 415
           +V +K       DN+  +R G  A+   
Sbjct: 357 KVKIK-----MKDNDDRMRVGMTAKASV 379


>gi|206578040|ref|YP_002236977.1| multidrug resistance protein A [Klebsiella pneumoniae 342]
 gi|288933935|ref|YP_003437994.1| efflux pump membrane protein [Klebsiella variicola At-22]
 gi|290510987|ref|ZP_06550356.1| multidrug resistance protein A [Klebsiella sp. 1_1_55]
 gi|206567098|gb|ACI08874.1| multidrug resistance protein A [Klebsiella pneumoniae 342]
 gi|288888664|gb|ADC56982.1| efflux pump membrane protein [Klebsiella variicola At-22]
 gi|289775980|gb|EFD83979.1| multidrug resistance protein A [Klebsiella sp. 1_1_55]
          Length = 390

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 89/277 (32%), Gaps = 34/277 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     L   + + R   +N   L+    + +  L+  Q DL     L   N + +
Sbjct: 98  QQAFEKAKTQLAASVRQTRQQMINSKQLQANIDVKKTALAQAQADLNRRIPLGAANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  EL   I +       +     E          E+           
Sbjct: 158 EELQHARDTVASAQAELDVAIQQYNANQAIVLGTKLEQQPAVLQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         ++  I+SPI+G +   +S         + PLM +VP +   +I A 
Sbjct: 212 ------------ALQRTQIVSPISGYVSR-RSVQPGAQIGTTTPLMAVVPATN-LWIDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ H++ G  ATV    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQLAHMRIGQPATVISDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +   V +++ +   +++ + +  G    V     + 
Sbjct: 316 VQRLPVRIELDEKQLAEHPLRI--GLSTLVEVNTTDR 350



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 54/160 (33%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G PL+T +  +     +  K  +        
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDYVQKGDPLVTLDQTDAQQAFEKAKTQLAASVRQTR 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            +      L    DV + A    +  L     LG  +    +   +   +V  +      
Sbjct: 117 QQMINSKQLQANIDVKKTALAQAQADLNRRIPLGAANLIGREELQHARDTVASAQAELDV 176

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+       LE + ++L+A        L + + 
Sbjct: 177 AIQQYNANQAIVLGTKLEQQPAVLQAATEVRNAWLALQRT 216


>gi|150388153|ref|YP_001318202.1| RND family efflux transporter MFP subunit [Alkaliphilus
           metalliredigens QYMF]
 gi|149948015|gb|ABR46543.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
           metalliredigens QYMF]
          Length = 384

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 76/265 (28%), Gaps = 40/265 (15%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           GI     ++K                EN+  + +      Q +L  +K+L++  AV +  
Sbjct: 103 GIEQAEEAVKSATKGTEQAAQGIALAENQYKMAKDQYDDAQANLERIKSLYDAGAVPKTQ 162

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L+Q E             +      L        +A + +           +Q       
Sbjct: 163 LDQAE-------------MAAADGSLVAARSQITQAEISY-----------QQTLGQLRQ 198

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
               +           + +P +G I              +QP+  IV      YI+ ++ 
Sbjct: 199 AEISVDQARTNLNHLEVKAPASGIISTLDLR-VGQMVTNAQPVATIV-DVNALYIQFELP 256

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              I   K+G    V  P       +  KA +  +     Q+         Y V + +T 
Sbjct: 257 ENMINQFKRGQEVVVSIPA---ANVRDAKATVGLVSAATDQRTQL------YPVRIDLTK 307

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNT 420
                    +R G   EV      T
Sbjct: 308 SGDL-----VRPGSTGEVQVATNQT 327



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 5/172 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE-DIETTDLIDLKKVSIKNLRCH 109
           +  +N V +     GI+    V+ G  + +   L   E D      I+  + ++K+    
Sbjct: 58  VFSENEVMVLPRTPGIVDCVNVKLGDSVQKDQVLFVLEQDSSVLLGIEQAEEAVKSATKG 117

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            +     +    N+Y + +  ++  +  L      Y +          + +  +    + 
Sbjct: 118 TEQAAQGIALAENQYKMAKDQYDDAQANLERIKSLYDAGAVPKTQLDQAEMAAADGSLVA 177

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF----EKNAVSQNDLN 217
               I    +  +     LR    S  +  T + +L         +S  DL 
Sbjct: 178 ARSQITQAEISYQQTLGQLRQAEISVDQARTNLNHLEVKAPASGIISTLDLR 229


>gi|17546572|ref|NP_519974.1| multidrug resistance transmembrane protein [Ralstonia solanacearum
           GMI1000]
 gi|17428871|emb|CAD15555.1| probable multidrug resistance transmembrane protein [Ralstonia
           solanacearum GMI1000]
          Length = 385

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 45/360 (12%), Positives = 98/360 (27%), Gaps = 67/360 (18%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I + +V +   + +G  L+  +  +        K++++     + +    +       
Sbjct: 70  GTIAEVRVSDTQAVKKGDVLVVIDPTDA-------KLALEQAEAQLGSAVRRVRGYVAND 122

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L     +RE           S  +      I                           
Sbjct: 123 SSLGAQIIAREADEKRAAADLFSAQADFERAKI--------------------------- 155

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                        DL   + L    +VS  +L +       +          Q    R+ 
Sbjct: 156 -------------DLRRREALVASGSVSGEELTKARNAHATADAARAAPASAQARANRNA 202

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                +AN        E            A   +K         +  I +P+ G +   Q
Sbjct: 203 AVGSRQANAVLIANATE------DTNPEVALARAKRDQAAVDLGRTVIRAPVDGVVAKRQ 256

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                   +    L+ IVP     ++ A     Q+++V+ G  ATV+   Y       ++
Sbjct: 257 V-QLGQRVKSGTALLSIVPVQD-MHVDANFKEVQLENVRIGQPATVKADIYGGSA--SYR 312

Query: 365 AIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
            ++E             P  +   N ++  +   V +K+       + +++       + 
Sbjct: 313 GVVEGFSGGSGAAFAAIPAQNATGNWIKVVQRLPVRIKLDAAELEKHPLKVGLSMVVTID 372


>gi|114565748|ref|YP_752902.1| secretion protein HlyD [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114336683|gb|ABI67531.1| secretion protein HlyD [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 334

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 109/324 (33%), Gaps = 26/324 (8%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +   L D ++           T  ++         +L     + E+     + +     +
Sbjct: 30  QQKALADRRESLAATGTIEAKTIMTSFKVPGRIETLLFDEGATVEKGQELAVLETQEIEA 89

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++      S   +  +     +++ L    +E K +   A L+++Q+    +K+L E  A
Sbjct: 90  RLLQAE-GSCQAAEGLAGQAEKAVSLTSQTVEAKIAQAEANLTNYQQKFDRVKSLHESGA 148

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           ++ +  ++    +  +  +L E    ++ +     E+  + +L      ++    L++ Q
Sbjct: 149 IADSQFDEAANALKAAQGQLDEARAGREKV-----EVAQQEHLAAVGKAQQAQGVLQEAQ 203

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                                + SPI+G I   +            P+ +I       Y+
Sbjct: 204 TA--------------MNNTRLKSPISGYITQ-KVIEEGEMLNAGTPVFEISDLKHP-YV 247

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEV 389
           +  +  ++I  V       VR   +     K F   +  I             ++Y +++
Sbjct: 248 KVFIDERKIGRVYLQQAVEVRVDAFPR---KVFPGKVVWISDAGQFAVQKAINEQYSHDI 304

Query: 390 ILKITDLAFSDNNIELRNGFPAEV 413
                 +   ++++ L+ G  A V
Sbjct: 305 RSFEVKIDLPNDDLALKTGMTASV 328



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 75/232 (32%), Gaps = 21/232 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEIKSPF 63
           + R   A +  + +L ++ +     +       L     S++++G I  +  +   K P 
Sbjct: 1   MARKKYAVIIFLVMLLLVAMGIFYAYFYQQQKALADRRESLAATGTIEAKTIMTSFKVP- 59

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I+    + G+ + +G  L   E  E    +   + S +           A   ++  
Sbjct: 60  -GRIETLLFDEGATVEKGQELAVLETQEIEARLLQAEGSCQAAEGLA---GQAEKAVSLT 115

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              +E      E  L ++  K+           + S++ S  +  ++           + 
Sbjct: 116 SQTVEAKIAQAEANLTNYQQKFD---------RVKSLHESGAIADSQFDEAANALKAAQG 166

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           +    RA     + ++   ++L       Q     QE     +   L+  I 
Sbjct: 167 QLDEARAGRE--KVEVAQQEHLAAVGKAQQAQGVLQEAQTAMNNTRLKSPIS 216


>gi|258542396|ref|YP_003187829.1| hypothetical protein APA01_13030 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633474|dbj|BAH99449.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256636533|dbj|BAI02502.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256639586|dbj|BAI05548.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256642642|dbj|BAI08597.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256645697|dbj|BAI11645.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256648750|dbj|BAI14691.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256651803|dbj|BAI17737.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654794|dbj|BAI20721.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 339

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 85/289 (29%), Gaps = 42/289 (14%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  QLL   G   ++   +     ++V         +             +    ++ L 
Sbjct: 70  RITQLLAQEGDNVTSGQILAQEDKAAVQAQYDQASAQQNRAASATGRASAELVARQSALQ 129

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             + +L   + + ++N VS  ++ Q+   V  +   +                   +A  
Sbjct: 130 LARDELRHAQKMRQQNLVSDMEVTQRHTQVETAQAAVNAAF---------------QAVQ 174

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E  +  +  +  + Q Q    D               TI +P++G I   +   + +   
Sbjct: 175 EALHAKEGAAAQVNQVQTVLDDM--------------TIRAPVSGRI-EYRVIETGSVLP 219

Query: 314 QSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               +  ++ P      +        I ++K G  A +RF            A +  ID 
Sbjct: 220 PGGRVYSMLDPVDPYMTL--FFPTASISNLKIGDEARIRFDGMDT----PVAATVSFIDS 273

Query: 373 IIS-----QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                    +    + Q  Y V L++T          L+ G   E    
Sbjct: 274 QAQFTPKYVETATEREQLVYRVKLRVTADEQKRLGTLLKAGMTGEGYIK 322



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 59/187 (31%), Gaps = 10/187 (5%)

Query: 12  NHPASLKRMTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             PA +  + L       G   W     +  +P +  +  +G +      V +K P  G 
Sbjct: 14  KAPAKIAIIALSLFAVAGGAFAWHEHQVAQSVP-DGIIYGNGRLEFTRVDVAVKYP--GR 70

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +   + G  +  G  L   +        D  + S +  R    T +++ + +  +  +
Sbjct: 71  ITQLLAQEGDNVTSGQILAQEDKAAVQAQYD--QASAQQNRAASATGRASAELVARQSAL 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                E R  Q +              +  + +   ++      ++     +     + +
Sbjct: 129 QLARDELRHAQKMRQQNLVSDMEVTQRHTQVETAQAAVNAAFQAVQEALHAKEGAAAQVN 188

Query: 187 LLRALLS 193
            ++ +L 
Sbjct: 189 QVQTVLD 195


>gi|209964942|ref|YP_002297857.1| HlyD family secretion protein [Rhodospirillum centenum SW]
 gi|209958408|gb|ACI99044.1| HlyD family secretion protein [Rhodospirillum centenum SW]
          Length = 421

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 79/222 (35%), Gaps = 23/222 (10%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNM--------LRHINELYDEANLEFANYLKE 261
           AV++  + + E  V ++ +EL +   + +          L   +       L+ A+   +
Sbjct: 106 AVARARVTEAEAQVRRAEVELEDARRDFRRREALRKGGNLSERDYDIARTRLDTADVGLD 165

Query: 262 ISR-DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PL 318
           ++R  L   +     + + L   E   E+  I +PI G ++  +       A   Q   L
Sbjct: 166 LARAQLVNARAAVLQQEATLNQAEIDLERTCIRAPITGVVIKREVEPGQTVAASLQAPTL 225

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            ++V +     ++A+V    I  V  G TA      +       F+  + +I     +  
Sbjct: 226 FELVTNLTEMEVQARVDEADIGRVAVGQTARFSVDAFPGRT---FQGRVTQI----QKSP 278

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +Q    Y V++        + +  L  G  A++       
Sbjct: 279 KEVQNVITYTVLVSAP-----NPDERLLPGLTAKLDIVVGEK 315



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 55/155 (35%), Gaps = 10/155 (6%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PI  +VS+SG +    +V  + S  SG I +  V+  S + +G  L   +       + 
Sbjct: 41  GPIVSAVSTSGTVQPAASV-IVGSQLSGQISEVLVDFNSVVREGDVLARLDPKTYEARVR 99

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE---------EQLLDFLGKYHST 148
             +  +   R  +   ++ +     + +   + F  RE         E+  D       T
Sbjct: 100 QNQALLAVARARVTEAEAQVRRAEVELEDARRDFRRREALRKGGNLSERDYDIARTRLDT 159

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                +   + +  +    L +  ++    +DLE 
Sbjct: 160 ADVGLDLARAQLVNARAAVLQQEATLNQAEIDLER 194


>gi|304436978|ref|ZP_07396941.1| RND family efflux transporter [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304369929|gb|EFM23591.1| RND family efflux transporter [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 370

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 71/214 (33%), Gaps = 27/214 (12%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLEQNQRTFADEMSKL 280
           +    L    +E K            A     +YL+ I      DLE  +  +    S L
Sbjct: 88  QIVATLDGKDYEAKRDQAQYRVTNTRAKYNRMSYLESIGAKSKSDLEDAEYNYDTAQSTL 147

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPK 337
                   +  I +PI+G +V     + +   Q S     +M+I        I+AKV   
Sbjct: 148 EEANSDANETIITAPISGVVVGEPKNAGTMAVQGSDNPTVIMRIA-DLSKKQIKAKVDET 206

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----------Y 386
            I  ++ G +AT     + D   K F A + KI         +  +             Y
Sbjct: 207 DIGSIRIGQSATFSVDAFTD---KTFTARVSKISQTDVTNSWDTSSSSSSSASSNASVIY 263

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           Y V L + D     +N+ L     A V+    + 
Sbjct: 264 YYVTLDVDD----PDNL-LLPAMTARVVIDTADK 292



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +  + I+ +V ++G I   D+V E+ S  +  I    V+    +  G  + T +  +   
Sbjct: 42  AARMNIKSTVEATGTIRPVDSV-EVSSKITARISSVLVKENDTVTAGQIVATLDGKDYEA 100

Query: 95  LIDLKKVSIKNLRC 108
             D  +  + N R 
Sbjct: 101 KRDQAQYRVTNTRA 114


>gi|299149280|ref|ZP_07042340.1| putative multidrug resistance protein [Bacteroides sp. 3_1_23]
 gi|298512714|gb|EFI36603.1| putative multidrug resistance protein [Bacteroides sp. 3_1_23]
          Length = 356

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 97/285 (34%), Gaps = 31/285 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL    + +    K     +   + S  +  + + + + N    +   +  +A L   ++
Sbjct: 87  LLVLDNREYQIKVKEAEAALLDAHGSQDVLHSGIETSHTNIAVQDANIAEAKAKLWQLEQ 146

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D    + L ++ +V +    Q +     +    +  + +++  L    E   +     A 
Sbjct: 147 DYHRFERLLKEESVPEQQYEQAKAAYEAAKARYQALVAQKQAALSQYAETSKKTTGTEAA 206

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L++                + L + +       + +P  G +   ++     Y Q  Q 
Sbjct: 207 ILRK---------------EADLDLAKLNLSYTVLTAPYDGYM-GRRTLEPGQYVQTGQT 250

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID------ 371
           +  +V  +K  +I A     QI ++  G    ++      +  K F   +  I       
Sbjct: 251 ISYLV-RNKDKWITANYKETQIANIYIGQQVRIKVDA---VPGKIFHGEVTAISEATGSK 306

Query: 372 ----PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
               P  +   N ++ Q+   V + + D++  +   +LR G   E
Sbjct: 307 YSLVPTDNSAGNFVKVQQRIPVRIDLEDVS-PEEMAQLRAGMMVE 350



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 51/154 (33%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+ + +    + QG  LL  ++ E    +   + ++ +     D   S ++  +  
Sbjct: 67  SGYIKEVRFKEHQYVHQGDTLLVLDNREYQIKVKEAEAALLDAHGSQDVLHSGIETSHTN 126

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             V +      + +L      YH     +    +                     L  + 
Sbjct: 127 IAVQDANIAEAKAKLWQLEQDYHRFERLLKEESVPEQQYEQAKAAYEAAKARYQALVAQK 186

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +++L +   +S +   T    L ++  +    LN
Sbjct: 187 QAALSQYAETSKKTTGTEAAILRKEADLDLAKLN 220


>gi|300716164|ref|YP_003740967.1| HlyD family secretion protein [Erwinia billingiae Eb661]
 gi|299062000|emb|CAX59116.1| HlyD family secretion protein [Erwinia billingiae Eb661]
          Length = 364

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 100/327 (30%), Gaps = 27/327 (8%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            ++      +R  +      ++      DVL+     + + L+    + ++      +  
Sbjct: 49  QIQSTENAYVRGQVTFISPQVNGYLTSVDVLDYQPVRQGDLLMTIDDRIYNQKVHQADAQ 108

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           ++    +L   + + RS        +      +A       DL  ++NL    ++S    
Sbjct: 109 VAMKKAALANNIQQRRSAQAVIERNQAALQNAKAQAVKSGLDLKRVENLVSDGSLSI--- 165

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
               R    S     + + + +     ++    +      N            +   A  
Sbjct: 166 ----REGDASRASNSQTMADVQQAKATLDVSRQDLQTVIVNRAS--------LEADVASA 213

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + L + +       I++P  G +          Y      L  +VP  K  ++ A +  
Sbjct: 214 EAALELTQIDLANTKIIAPRDGQLGQISVR-QGAYVTAGTRLTSVVP--KQLWVVANMKE 270

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEV--I 390
            Q+  ++ G           + R   F+  +E I P    +      +  T  + ++   
Sbjct: 271 TQMARIRPGLPVNFTVDALNEER---FEGEVEYISPAAGSEFSAISPDNATGNFVKIAQR 327

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTA 417
           + +     SDN   LR G   EV    
Sbjct: 328 IPVRIKITSDNAAHLRPGMSVEVNIDT 354



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 71/207 (34%), Gaps = 19/207 (9%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S+     ++++G++ ++    L P    + S+        V  I    +G +    V + 
Sbjct: 22  SIAFGAGIALVGVLVILYAWQLPPFTSQIQSTENAYVRGQVTFISPQVNGYLTSVDVLDY 81

Query: 76  SQILQGTPLLTFEDI-------ETTDLIDLKKVSIKN-----LRCHIDTEKSALDFLNNK 123
             + QG  L+T +D        +    + +KK ++ N            E++     N K
Sbjct: 82  QPVRQGDLLMTIDDRIYNQKVHQADAQVAMKKAALANNIQQRRSAQAVIERNQAALQNAK 141

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFN-------YGISSVYRSLKMKLTRMRSIYL 176
              ++   + +  + L   G                    +     +L +    ++++ +
Sbjct: 142 AQAVKSGLDLKRVENLVSDGSLSIREGDASRASNSQTMADVQQAKATLDVSRQDLQTVIV 201

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMK 203
           NR  LE   +   A L   Q DL   K
Sbjct: 202 NRASLEADVASAEAALELTQIDLANTK 228


>gi|289166969|ref|YP_003445236.1| competence factor transport protein ComB [Streptococcus mitis B6]
 gi|288906534|emb|CBJ21366.1| competence factor transport protein ComB [Streptococcus mitis B6]
          Length = 449

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 54/436 (12%), Positives = 141/436 (32%), Gaps = 30/436 (6%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R +     R+ +   + ++ L+ ++     E+S+S+   +     +  I+S  +  I   
Sbjct: 14  RRYHNFSSRVIVPMSLLLVFLLGFATFAEKEMSLSTRATVEPSRILANIQSTSNNRILVN 73

Query: 71  QVENGSQILQGTPLLTF----EDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            +E    + +G  LL +    E ++       +D+ K   K L     + +   D+   +
Sbjct: 74  HLEENKLVKKGELLLQYQEGAEGVQAEAYASQLDMLKDQKKQLEYLQKSLQEGTDYFPEE 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                +A           L    S  ++      ++  ++       +        D + 
Sbjct: 134 DKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQAEAKIRDYQT 193

Query: 184 KSSLLRALLSSHQKDLTMM-----------KNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
             S +    S   ++L                  +  AV+Q +   Q   +  S    R 
Sbjct: 194 AKSAIETGASLGNQNLAYSLYQSYKSQGEENPQAKAQAVAQVE--AQLSQLESSLATYRV 251

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                 +   + + L  +     + +L ++ ++L    +   +  S   +     ++  I
Sbjct: 252 QYAGSGSQQAYASGLSSQLESLKSQHLAKVGQELTLLDQKILEVESGKKVQGNLLDKGKI 311

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTAT 349
            +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G +  
Sbjct: 312 TASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEKEGKAKLTAYLSSKDVARIKVGDSVR 371

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                +    +    + I  ID   ++ +       ++++  +      S+   +LR G 
Sbjct: 372 YT-TTHDAKNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLRYGV 424

Query: 410 PAEVLFTAKNTTLAQE 425
              +       +  + 
Sbjct: 425 EGRLQMITGKKSYLRY 440


>gi|283796154|ref|ZP_06345307.1| putative secretion protein HlyD [Clostridium sp. M62/1]
 gi|291076373|gb|EFE13737.1| putative secretion protein HlyD [Clostridium sp. M62/1]
 gi|295092209|emb|CBK78316.1| RND family efflux transporter, MFP subunit [Clostridium cf.
           saccharolyticum K10]
          Length = 574

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 51/463 (11%), Positives = 132/463 (28%), Gaps = 68/463 (14%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITW--SILLPIEISVSSSGEI----LNED---------- 54
           R +   +  ++ L +   +    W  S     E S  S+G++    +             
Sbjct: 14  RKNWKRIAAVSGLILAAAVLSAVWKLSESGETEESAVSTGKVTRQDIVSTLSASGTLEPK 73

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           +   I S   G + +   E G Q+ +G  L   +       +      ++  +   DT  
Sbjct: 74  DTYSITSMAEGEVVEASFEEGDQVTEGQVLYRIDASSMESRLQSASNDVERAQDSYDTAV 133

Query: 115 SALDFLNNKYD----------------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           S  +   ++Y                 +      S   Q+ D            F    +
Sbjct: 134 SDYNEAASRYSGNTYKAEKAGYIKTLYIEAGDKVSSNTQIADIYNDSVMKVRIPFLNTEA 193

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS------ 212
           +        +  + S            S +   L+  +    +   +     +S      
Sbjct: 194 AQIPEGAQAVLTLSSTAEQISGTVTGVSSMDEALTGGRLIRYVTIEVENPGGLSSSVAAT 253

Query: 213 --------------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
                         +  ++         ++E+   + ++ +++     L+   +      
Sbjct: 254 AQVGEFYSSGDGTFEPSVDTVLVADLPQSVEVAGLLVQEGDLVSVGTPLFSMTSDSAKKL 313

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L+     ++  Q       S L   +++ +  TI +PI+GT++  +S    +  Q     
Sbjct: 314 LQSYKDSMDTAQSQLESAQSSLDSTQESYDDYTITAPISGTVIT-KSVKVGDKIQNGSSA 372

Query: 319 --MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
             + ++        +  +    I  V++G    ++   +       F   +  +      
Sbjct: 373 STLAVIYDLSALTFQINIDELDISQVEEGQEVEIQADAFEGET---FSGTVTNVS----M 425

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  +     YY V + + +         L  G   +      +
Sbjct: 426 EGTSSNGVTYYPVTVTLNESG------SLLPGMNVDGTIITAS 462


>gi|310767122|gb|ADP12072.1| Putative multidrug resistance protein K [Erwinia sp. Ejp617]
          Length = 380

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 58/417 (13%), Positives = 127/417 (30%), Gaps = 86/417 (20%)

Query: 7   KNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           KN  R     L  + ++ ++ + + L+ W +   IE +  +      E + V I    SG
Sbjct: 33  KNRPRPGKKPLIILAIVVVVMLSVALVFWLMNRNIETTDDA----FTEADAVTIAPKASG 88

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I + +V++  ++ +G  L+  +  + +   D                            
Sbjct: 89  YITQLKVKDNQRVKKGDLLVVIDVRDASAQRDRA-------------------------- 122

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLDLEN 183
                    + +L   + + H   +++    +   +       +L R  + YLN  + + 
Sbjct: 123 ---------QAELGVAVAQLHQAQAQLALARVQYPAQKEQALAQLARAEANYLNAREDDK 173

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +   +    +S                         +R +  ++ +LR    E KN    
Sbjct: 174 RQRGVDPRATS-------------------------QRNIDAASAQLRSAKAELKNAQAQ 208

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +         + A  +++    +E  Q       ++L           + +P  G I   
Sbjct: 209 VA-----VASQVALQIRQQETSVEARQSQVDQAQAQLNTASLNLSYTEVRAPYDGFITKR 263

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                    Q    L  +V      +I A     Q+  +K G    +    + D++    
Sbjct: 264 NV-QVGTLVQAGSSLFSLVSPD--MWIVANFKESQLARMKPGNKVDISVDAWPDLK---L 317

Query: 364 KAIIEKI--------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           K  ++ +            S+       +    V +KI   +  D N  L  G   E
Sbjct: 318 KGHVDSVQMGSGSRFSAFPSENATGNYVKIVQRVPVKIVIDSGLDANHPLPIGLSVE 374


>gi|7677417|gb|AAF67159.1|AF233286_3 putative transport protein RmrA [Rhizobium etli CFN 42]
          Length = 396

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 49/376 (13%), Positives = 108/376 (28%), Gaps = 83/376 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +   +    SG I +  V +   +  G PL   +D              ++ R  +D
Sbjct: 89  VKADNTTVAPKVSGYIAEVLVGDNQVVKAGQPLARIDD--------------RDFRAALD 134

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH-STCSKVFNYGISSVYRSLKMKLTR 170
             K+ +       +  + + + ++  +      +     ++ F    +  Y         
Sbjct: 135 QAKADVAEAEATLNAKQASLDIQQSTIAAARATFEVDKANETFAEQNNKRYA-------- 186

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
                                            NL            Q    +  +   +
Sbjct: 187 ---------------------------------NLATNGYAPVQTAQQAASAIAAAQATI 213

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA-DEMSKLTILEKTREQ 289
             +       ++ ++ L               + +L Q + T A D+  +          
Sbjct: 214 VRDNAALDAAVKQVDLL---------------NAELAQAKATLAHDQAVQRQAELNPLFM 258

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           + I +P+    + N++     Y Q    LM +VP S +  I A     Q+  V+ G    
Sbjct: 259 RPITAPVRTGPIGNRALRVGQYVQAGTQLMSVVPTSAVYVI-ANYKETQLTDVRAGQPVD 317

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDN---N 402
           +    Y     +     ++ + P   Q+      +  T  + +V+ +I      D    N
Sbjct: 318 IEVDTYPGRTYR---GHVDSLAPASGQEFALLPPDNATGNFTKVVQRIPVKIVLDGEAAN 374

Query: 403 IELRNGFPAEVLFTAK 418
            +LR G   +     K
Sbjct: 375 GDLRPGMSVQPSIDTK 390


>gi|162449274|ref|YP_001611641.1| hypothetical protein sce1004 [Sorangium cellulosum 'So ce 56']
 gi|161159856|emb|CAN91161.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
          Length = 373

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 76/256 (29%), Gaps = 20/256 (7%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN-DLNQQERIVYKSTLELRE 232
           +   R++   +  L   +     + L       +K  +    D    ER V ++  EL  
Sbjct: 55  LETGRIEAREQVELKSKVAGQVAEVLADEGARVQKGQLLLVLDPTDYEREVARAEAELAR 114

Query: 233 NIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                    R + +     EA++  A  L     DL +           L+         
Sbjct: 115 ARAAAGFAKRVVAQRTAGVEASVVPAQELDTAKHDLTEKTVAIRLAEVALSAARDQLRYT 174

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQS------QPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
            I SP+ GT++  ++                   +  V       ++  +    +  V  
Sbjct: 175 KIASPLDGTVIQ-RNIEPGEVVTPGVQSTFNGKALLTVADLSTLVVKVDLNQIDVAKVAL 233

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G TAT+              A + KI P   + +         EV +   +   +  +  
Sbjct: 234 GQTATLTLDALPGKTY---AARVTKIAPASVKLEGR-------EVDVFPVEAELTQIDGL 283

Query: 405 LRNGFPAEVLFTAKNT 420
           ++ G  A+V     + 
Sbjct: 284 IKPGMTADVRIRLDSR 299



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 30  GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
            L+  +    + + +  +G I   + V E+KS  +G + +   + G+++ +G  LL  + 
Sbjct: 40  ALVVTAKRGDLAVEILETGRIEAREQV-ELKSKVAGQVAEVLADEGARVQKGQLLLVLDP 98

Query: 90  IETTDLI 96
            +    +
Sbjct: 99  TDYEREV 105


>gi|33600873|ref|NP_888433.1| putative multidrug resistance protein [Bordetella bronchiseptica
           RB50]
 gi|33568473|emb|CAE32385.1| putative multidrug resistance protein [Bordetella bronchiseptica
           RB50]
          Length = 404

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 48/420 (11%), Positives = 113/420 (26%), Gaps = 86/420 (20%)

Query: 10  KRNHPASLKRMTL----LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
              HPA  + + L     +++ I   I W++         S+ +     N+V+I     G
Sbjct: 13  PTTHPARKRLLWLATGVFAVLAIAYAIWWALFG---SHFESTDDAYVHGNLVQITPQVPG 69

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +   + ++   +  G  L+  +  +T        V+++     +      +  L  + D
Sbjct: 70  TVVAIEADDTEAVTAGQALVRLDPADTD-------VALQQAEARLAQTVRQVRTLYVQND 122

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            L    + R+ ++           S                                   
Sbjct: 123 ALAADIDVRQAEIARAQADLKRAQS----------------------------------- 147

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                       DL   + L +   VS  ++   E  +  +   L +           + 
Sbjct: 148 ------------DLQRRQTLAKSGGVSGEEILHAETALKSAQSALAQARANLAAAQAKLA 195

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                          ++     Q +  +             R +  + +P+ G +   ++
Sbjct: 196 TNQALTEGTTVAEHPDVRNAAAQVRNAWL-----------NRSRTVLPAPVDGIVAR-RA 243

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       LM +VP     ++ A     Q++H++ G  A +    Y       +  
Sbjct: 244 AQVGQRVAPGAMLMNVVPLD-QIWVEANFKEGQLRHMRIGQPARITADLYGGSV--VYDG 300

Query: 366 IIEKIDPIISQQDNNLQTQ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +  +D         L  Q          +   V + +       + + +      EV  
Sbjct: 301 KVIGLDAGTGSAFALLPAQNASGNWIKVVQRVPVRIALDPEQLKTHPLRVGLSMDVEVDV 360


>gi|59712740|ref|YP_205516.1| periplasmic component of efflux system [Vibrio fischeri ES114]
 gi|59480841|gb|AAW86628.1| periplasmic component of efflux system [Vibrio fischeri ES114]
          Length = 370

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 86/234 (36%), Gaps = 30/234 (12%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           +K ++L A +++  ++L     L +K A     + + + I      +L   + + K +  
Sbjct: 80  DKQAILGAQVAAQIEEL-----LVKKGA----RVTKGQPIARLDMADLDLQLSQAKAIYS 130

Query: 243 -HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             + E      L+      E++    Q+Q + A+  +++   E   E  TI +P  G + 
Sbjct: 131 VRMKEFNAAKELKRKGLQGEVA--FSQSQASLAEAKARVRNAELILENTTITAPFDGIVE 188

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
           +       ++  +  P+ K+V       I   V+ + I  + K   A V F     I + 
Sbjct: 189 HLFI-EVGDFVSRGDPVAKVV-VLDPLVIDVNVSERHISQITKQQKAEVSF-----INDV 241

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  +  I  I S   N               ++   +   ++  G  +EV  
Sbjct: 242 SIEGYVRYISKISSLSTNTFSV-----------EIEILNIGGKIPAGISSEVEI 284



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 4/126 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I++  V+ G+++ +G P+   +       +DL+    K +      E +A   L  K   
Sbjct: 93  IEELLVKKGARVTKGQPIARLD----MADLDLQLSQAKAIYSVRMKEFNAAKELKRKGLQ 148

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E AF   +  L +   +  +    + N  I++ +  +   L      +++R D   K  
Sbjct: 149 GEVAFSQSQASLAEAKARVRNAELILENTTITAPFDGIVEHLFIEVGDFVSRGDPVAKVV 208

Query: 187 LLRALL 192
           +L  L+
Sbjct: 209 VLDPLV 214


>gi|313110221|ref|ZP_07796117.1| multidrug resistance protein [Pseudomonas aeruginosa 39016]
 gi|310882619|gb|EFQ41213.1| multidrug resistance protein [Pseudomonas aeruginosa 39016]
          Length = 394

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 86/269 (31%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + ++R ++ N      + +  +  L+  + D    KNL +  A+SQ +
Sbjct: 95  ALQRAEANLAHTVRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQEE 154

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   L  +    +  L     L D+  +     +K  +  L Q     A 
Sbjct: 155 LAHARDALDSAKASLTSS----EQQLNTNRALVDDTQITSHPDIKAAAAQLRQAYLDDA- 209

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        + TI++P+ G +   +S       Q    LM +VP     +I A   
Sbjct: 210 -------------RSTIVAPVTGYVAK-RSVQVGQRVQPGTALMAVVPLD-QIWIDANFK 254

Query: 336 PKQIQHVKKGYTATVRFPHY--ADIREKKFKAI-IEKIDPIISQQDNNLQTQ-----EYY 387
             Q++H++ G    +R   Y           ++ +            N         +  
Sbjct: 255 ETQLKHMRIGQPVEIRSDLYGSDVRYSGTVDSLGVGTGSAFSLLPAQNATGNWIKIVQRV 314

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + I       + + +      +V   
Sbjct: 315 PVRIHIDPQELQKHPLRIGLSMDVKVDLH 343



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            NVV+I     G +     ++G  + +G  L+ F+  +         ++++    ++   
Sbjct: 54  GNVVQITPQIVGTVVSIGADDGDLVRKGQELVRFDPSDAD-------IALQRAEANLAHT 106

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              +  L +  D       +R+  L      Y    +   +  IS     L      + S
Sbjct: 107 VRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQ--EELAHARDALDS 164

Query: 174 IYLNRLDLENKSSLLRALLSSHQ 196
              +    E + +  RAL+   Q
Sbjct: 165 AKASLTSSEQQLNTNRALVDDTQ 187


>gi|196233946|ref|ZP_03132783.1| secretion protein HlyD family protein [Chthoniobacter flavus
           Ellin428]
 gi|196221995|gb|EDY16528.1| secretion protein HlyD family protein [Chthoniobacter flavus
           Ellin428]
          Length = 508

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 46/402 (11%), Positives = 123/402 (30%), Gaps = 38/402 (9%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    +G + K  V++ +++ +G  ++  +       + +K+ ++   +  + 
Sbjct: 70  VNSHVTFVAPRVAGQVAKVLVDDNNRVHKGDVIVVLDKEPYQVQVAIKQAALDTAQADLI 129

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ +     +        +   E + + +    +  + +      S     K +  R 
Sbjct: 130 AAQATVRGQVAQARSARYKLQHTIEDVDNKIAVLRANAAALAKS--KSSLELAKQEFDRY 187

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV------------SQNDLNQQ 219
           + +   R+  + +    +    S Q ++        ++ V               D+ + 
Sbjct: 188 QKLLTTRVASKEEFDQRKTTYDSAQAEVNQATENVIQSRVNLGLPAKPADGQPLTDVPED 247

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN--YLKEISRDL----------- 266
               + S  + + ++ +    +      Y     E  +  Y ++ S D+           
Sbjct: 248 LPQTFSSVRQAQADLLQSAAQISIFPSSYKLTPKEMVDEFYRRDPSGDIDVIYSKIIKDA 307

Query: 267 ---EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
              +Q           L   E       I++ I G +         N  Q  Q LM I  
Sbjct: 308 PTQKQAAAKLLQAQHDLEDAELNLRYCDIVAEIDGIVTRRNVN-PGNNVQVGQSLMAIR- 365

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR--EKKFKAIIEKIDPIISQQDNNL 381
                +I A     Q+  ++ G    +    Y      + +           +S      
Sbjct: 366 SLTEVWIDANFKETQLSQLRIGLPVDIHADMYGKRHVFKGRISGFTMGTGSTLSLLPAEN 425

Query: 382 QTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            T  + +V+    ++I  + ++ +   L  G   E +   K 
Sbjct: 426 ATGNFVKVVQRLPVRIDLIDYNPDVEPLFVGVSVEPVVRIKE 467


>gi|153833707|ref|ZP_01986374.1| secretion protein, HlyD family [Vibrio harveyi HY01]
 gi|148869986|gb|EDL68946.1| secretion protein, HlyD family [Vibrio harveyi HY01]
          Length = 368

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 92/291 (31%), Gaps = 43/291 (14%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF--EKNAV 211
           ++ I+      K+K+            +  ++ L  AL++         + L   EK  V
Sbjct: 92  DHQIAVKQAEAKLKIAGQNVGSQMAGVMSAQAQLTTALVAQENAKRQGQRVLAMAEKGVV 151

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S++D +     + K+  ++       +     +    +E                     
Sbjct: 152 SKSDADTTRAAIDKANADVVNAKANLEKAKAQVGAAGEEN-------------------A 192

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                + +L   +    + T+ +P  G +      S   YA    PLM  V  S   ++ 
Sbjct: 193 QIQSALLELQQAQLNLSRTTMRAPSDGAVTNFNL-SQGAYATAGSPLMTFV-ESDGLWLE 250

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--------------PIISQQ 377
           A      + ++  G    +          + F   +  +D                +  Q
Sbjct: 251 AFFRENSMGNINAGDKVEI---ALDYAPGQTFSGTVSSVDLGVAWGANNQPGTLATVKNQ 307

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           +  L+  +   V +K+ D   +D    +R G  A+V+   ++ TL   +  
Sbjct: 308 NGWLRDTQRMPVTIKLDDKHAAD---FMRIGGQADVVIYTESNTLFNFLGK 355



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 78/213 (36%), Gaps = 11/213 (5%)

Query: 1   MHHFMWKNLKRNHPAS---LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVV 57
           M     KN     P     +KR T   +   +  I  +I+   +  + ++  +  E NVV
Sbjct: 1   MSETAIKNQATQAPQPVNKIKRTTNALLALTMVSIGTAIVA--DRIIPTTDNVRVEGNVV 58

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            +    SG +    ++  +++ +G  LL     +    +   +  +K    ++ ++ + +
Sbjct: 59  SLIPQVSGQVDSISIKPNTEVKKGDVLLQINTTDHQIAVKQAEAKLKIAGQNVGSQMAGV 118

Query: 118 DFLNNKY--DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                +    ++ +    R+ Q +  + +         +   +++ ++    +    ++ 
Sbjct: 119 MSAQAQLTTALVAQENAKRQGQRVLAMAEKGVVSKSDADTTRAAIDKANADVVNAKANLE 178

Query: 176 LNRLDL----ENKSSLLRALLSSHQKDLTMMKN 204
             +  +    E  + +  ALL   Q  L + + 
Sbjct: 179 KAKAQVGAAGEENAQIQSALLELQQAQLNLSRT 211


>gi|218894259|ref|YP_002443128.1| multidrug resistance protein [Pseudomonas aeruginosa LESB58]
 gi|218774487|emb|CAW30304.1| multidrug resistance protein [Pseudomonas aeruginosa LESB58]
          Length = 394

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 86/269 (31%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + ++R ++ N      + +  +  L+  + D    KNL +  A+SQ +
Sbjct: 95  ALQRAEANLAHTVRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQEE 154

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   L  +    +  L     L D+  +     +K  +  L Q     A 
Sbjct: 155 LAHARDALDSAKASLTSS----EQQLNTNRALVDDTQITSHPDVKAAAAQLRQAYLDDA- 209

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        + TI++P+ G +   +S       Q    LM +VP     +I A   
Sbjct: 210 -------------RSTIVAPVTGYVAK-RSVQVGQRVQPGTALMAVVPLD-QIWIDANFK 254

Query: 336 PKQIQHVKKGYTATVRFPHY--ADIREKKFKAI-IEKIDPIISQQDNNLQTQ-----EYY 387
             Q++H++ G    +R   Y           ++ +            N         +  
Sbjct: 255 ETQLKHMRIGQPVEIRSDLYGSDVRYSGTVDSLGVGTGSAFSLLPAQNATGNWIKIVQRV 314

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + I       + + +      +V   
Sbjct: 315 PVRIHIDPQELQKHPLRIGLSMDVKVDLH 343



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            NVV+I     G +     ++G  + +G  L+ F+  +         ++++    ++   
Sbjct: 54  GNVVQITPQIVGTVVSIGADDGDLVRKGQELVRFDPSDAD-------IALQRAEANLAHT 106

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              +  L +  D       +R+  L      Y    +   +  IS     L      + S
Sbjct: 107 VRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQ--EELAHARDALDS 164

Query: 174 IYLNRLDLENKSSLLRALLSSHQ 196
              +    E + +  RAL+   Q
Sbjct: 165 AKASLTSSEQQLNTNRALVDDTQ 187


>gi|149278229|ref|ZP_01884367.1| multidrug resistance protein A [Pedobacter sp. BAL39]
 gi|149230995|gb|EDM36376.1| multidrug resistance protein A [Pedobacter sp. BAL39]
          Length = 347

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 88/291 (30%), Gaps = 29/291 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    + +    +    G       + +  +++ +   N    +      R  L+  QK
Sbjct: 77  LVKLDDRDYKVKVEQAEAGQVGANAGVGVSQSQIIATQANTSTAKANIDAARVKLNLAQK 136

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D     NL +  +++Q   +Q +     +    +    +    L+ +             
Sbjct: 137 DYARYANLVKDGSITQQQFDQAKAEKESAEAAFKAATDQYTAALKQVGTTQS-------- 188

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                   L  +        S +   +       + +P  G +               Q 
Sbjct: 189 -------QLAVSNSGVTQRQSDVDFAKLQLSYTDVKAPATGIVSKKNI-QKGQLIAAGQA 240

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L  IV +    Y+ A     Q++ +  G    +    Y +    +    +    PI   +
Sbjct: 241 LFSIV-NENSIYVTANFKETQLEDITPGQKVKIEVDAYPND---EVIGEVYNFAPITGAK 296

Query: 378 ----DNNLQTQEYYEVILKIT---DLAFSDNNI--ELRNGFPAEVLFTAKN 419
                 +  T  + +V+ +I     +  +  +I  +LR G   +V  + K+
Sbjct: 297 GSLLPPDNATGNFVKVVQRIPVKIKITKAQKDILAKLRPGMSVKVSVSIKD 347



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/310 (8%), Positives = 86/310 (27%), Gaps = 20/310 (6%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + ++  + +   G ++    E  + + +G  L+  +D +    ++  +         +  
Sbjct: 46  DGDISPVVARVGGYVQDINFEENTMVKEGDVLVKLDDRDYKVKVEQAEAGQVGANAGVGV 105

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +S +          +   ++   +L      Y    + V +  I+   +          
Sbjct: 106 SQSQIIATQANTSTAKANIDAARVKLNLAQKDYARYANLVKDGSITQ--QQFDQAKAEKE 163

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           S         ++ +     + + Q  L +  +   +   S  D  + +            
Sbjct: 164 SAEAAFKAATDQYTAALKQVGTTQSQLAVSNSGVTQRQ-SDVDFAKLQLSYTDVKAPATG 222

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + ++      +                 ++ + ++ Q        K+ I         +
Sbjct: 223 IVSKKNIQKGQLIAAGQALFSIVNENSIYVTANFKETQLEDITPGQKVKIEVDAYPNDEV 282

Query: 293 L------SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV--TPKQI-QHVK 343
           +      +PI G        +  +           V   +   ++ K+    K I   ++
Sbjct: 283 IGEVYNFAPITG--------AKGSLLPPDNATGNFVKVVQRIPVKIKITKAQKDILAKLR 334

Query: 344 KGYTATVRFP 353
            G +  V   
Sbjct: 335 PGMSVKVSVS 344


>gi|330861608|emb|CBX71795.1| hypothetical protein YEW_BM07020 [Yersinia enterocolitica W22703]
          Length = 327

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 51/357 (14%), Positives = 121/357 (33%), Gaps = 48/357 (13%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +   +V+   Q+ +G  L+  ++++T   I+  K  I++    I  E+SA+    N+
Sbjct: 8   GGKLISRKVQESQQVKKGDVLMVLDEVDTDIAIERLKAVIRSQEALIRQEESAIHIATNE 67

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             + E +   + E++   L    ++ +                     R+ +     L N
Sbjct: 68  TTLTEVSSWRKIEEIQATLSAARASENLA-------------------RTDFNRIAKLHN 108

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             S+ +++L + +  LT               + Q ER +  + +       +  +    
Sbjct: 109 TGSVSQSVLDNAKSSLTTT----------HAAVIQAERQLASAMIGTTPAQVKNLSEKES 158

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              +  ++       +K     L+Q         ++L  LE  R++ T+ +P +G ++  
Sbjct: 159 AQGMTLQSIANSRESIKNRQNILDQLLAQLDQSHAELRQLEVNRQRLTLTAPASGKVLKL 218

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             +          P + +   +   Y+   V    +   + G T T + P          
Sbjct: 219 L-YQPGEMIPAGAPAVLL--ETDRKYVDIYVNENMVTIYQPGTTVTAQVPALDSQ----V 271

Query: 364 KAIIEKIDP------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           + ++           +   ++        Y+V +   D        +L +G   EV 
Sbjct: 272 RGVVRFASAAPSFADLRMTRERGQADLTSYQVRIYTEDKP------QLLSGMTLEVD 322


>gi|66045017|ref|YP_234858.1| secretion protein HlyD [Pseudomonas syringae pv. syringae B728a]
 gi|63255724|gb|AAY36820.1| Secretion protein HlyD [Pseudomonas syringae pv. syringae B728a]
 gi|330972564|gb|EGH72630.1| secretion protein HlyD [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 385

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 49/423 (11%), Positives = 122/423 (28%), Gaps = 94/423 (22%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLIT----WS---ILLPIEISVSSSGEILNEDNVVEIKSP 62
            R+    +    +   + + G++     W       PIE + ++      +     I   
Sbjct: 29  PRSTRKRVVSSVIFGAVALAGVLVVLYAWQLPPFASPIESTENAQ----VKGQTTLIGPQ 84

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG + +  V++   +  G  L+  +D        + +  +      +  +K++L     
Sbjct: 85  LSGYVYEVPVQDFQFVKAGDLLVRLDD-------RIYRQRLDQAIAQLAVQKASLANNLQ 137

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +    E     R+ +L + + +   + +                                
Sbjct: 138 QRRSAEATIGQRQAELQNSIAQSRKSAA-------------------------------- 165

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                          DL   + L    +VS+++L      V ++          +   + 
Sbjct: 166 ---------------DLRRNQALVTDGSVSKSEL-----DVTRAADAQANAAVAEARAVL 205

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I              L+ +  +    + + A+  + + +     +   I++P  G +  
Sbjct: 206 QIA----------REDLQTVIVNRGSLEASVANAQAAIELARIDLDNTRIVAPRDGQLGQ 255

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP  +     A +   Q+ +V+ G   +            +
Sbjct: 256 IGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKETQMANVRLGQPVSFTVDALDGH---E 309

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVL 414
               +++I P    +      +  T  + ++  +I      D +      LR G    V 
Sbjct: 310 MHGHVQRISPAAGSEFSLLPADNATGNFVKISQRIPVRIVVDADQPMLEHLRPGMSVVVS 369

Query: 415 FTA 417
              
Sbjct: 370 IDT 372


>gi|85711339|ref|ZP_01042398.1| efflux pump protein FarA [Idiomarina baltica OS145]
 gi|85694840|gb|EAQ32779.1| efflux pump protein FarA [Idiomarina baltica OS145]
          Length = 367

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 97/274 (35%), Gaps = 30/274 (10%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   ++     L   +T + ++     + + +  L ++  +  +++    K L + ++VS
Sbjct: 91  YAIKVAQAKSQLAQVVTEIETLKAQYAEQQEQLVLAQSNAAFAEREFARQKRLVKSDSVS 150

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           ++ L++       +   ++      K +   +    +    +   YL+            
Sbjct: 151 ESTLDKYRHQWRVAKENVKSVEQGLKRIAASLAGQPNIDVKQHPRYLQ------------ 198

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                + L   E+  EQ  +++P++G    +++ S+  Y     P M +V      +I A
Sbjct: 199 ---AKAALDEAERNLEQTHVVAPMSG--FASKTPSAGQYIDPRNPAMVVVATEAP-WIEA 252

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQ 384
            +   Q+ HVK G    +    Y DI    +   ++ I            +Q       +
Sbjct: 253 NLKETQLTHVKVGQKVVIHVDAYPDI---VWHGNVKSIAAASGSEFALLPAQNSTGNWVK 309

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
               V ++I  +   D    LR G   E+     
Sbjct: 310 VVQRVPVRIAVVDTGDKP-PLRAGMSTEISIDTG 342


>gi|330999975|ref|ZP_08323672.1| auxiliary transport protein, membrane fusion protein family protein
           [Parasutterella excrementihominis YIT 11859]
 gi|329573199|gb|EGG54814.1| auxiliary transport protein, membrane fusion protein family protein
           [Parasutterella excrementihominis YIT 11859]
          Length = 328

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 116/350 (33%), Gaps = 79/350 (22%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            IK   VE G  +  G P              + +     L+  I+  K+A       Y 
Sbjct: 53  RIKSILVEEGDFVKAGQP--------------VSEQETDTLKIEIEQAKAAEQAAYQTYL 98

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            L+    SR E +           S++        +  +       +   +++  L+ +S
Sbjct: 99  ALKNG--SRPEDIAKAEAAVLVAQSRLHLAQKD--FERVDGTFKSTKGQGVSKQSLDTQS 154

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           S L+                     V++N+L   ++ +  + +  R              
Sbjct: 155 SQLQ---------------------VAKNELFSAQKSLELAKIGPRA------------- 180

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                              D+ +    +    +++  LE   +Q T+ +P+  T V ++ 
Sbjct: 181 ------------------EDVARAYAQWQQTKAQVAQLEVKLKQSTLYAPLD-TTVRSRL 221

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
               + A    P++ +   +   ++RA V    +  +K G  A V    Y + +      
Sbjct: 222 LQPGDMASAQVPVLALA-INSPKWVRAYVNEVNLGKIKPGQQAYVTIDAYPNEKIPGHVG 280

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            I  +     +  Q  +L+T   YEV + + D    +N++ L  G PA V
Sbjct: 281 FISSVAEFTPKTVQTPDLRTNLVYEVRILVDD---KENHLRL--GMPATV 325


>gi|296134319|ref|YP_003641566.1| efflux transporter, RND family, MFP subunit [Thermincola sp. JR]
 gi|296032897|gb|ADG83665.1| efflux transporter, RND family, MFP subunit [Thermincola potens JR]
          Length = 372

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 80/252 (31%), Gaps = 54/252 (21%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            +++         +  +      +     +L  M+NL+++ A+S+      E  + +  L
Sbjct: 102 AQLKQAQAALELAKGNAVQNDYRIQDAWNNLKRMENLYKEGAISKQQY---ELALLQYNL 158

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            L      Q   ++      D    + AN                               
Sbjct: 159 SLNTPTEAQ---VKQAQANVDLIKAQIANAR----------------------------- 186

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              I +PI G I   ++         S P++ IV  +   Y+   +T K I  V++G   
Sbjct: 187 ---ITAPINGEI-SVKNVEIGELVGPSAPVLTIV-DTGNVYVEGVITEKDIPFVREGQKV 241

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            V         EK     I  + P    +         Y+V +KI      + + +++ G
Sbjct: 242 KVEIDALG---EKDIVGTIAALSPAADSRTKG------YQVKVKI-----ENADGKIKPG 287

Query: 409 FPAEVLFTAKNT 420
             AE+  T +  
Sbjct: 288 MFAEISITTQAR 299



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/131 (11%), Positives = 51/131 (38%), Gaps = 4/131 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
              +G++     V+ I    +G + +  V+ GS++ +G  L+  +  E    +   + ++
Sbjct: 53  TVITGKVTARAEVMII-PKIAGKVTRVTVDVGSKVKRGDLLVQLDTTELNAQLKQAQAAL 111

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFES---REEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  + +       +    N    +E  ++     ++Q    L +Y+ + +      +   
Sbjct: 112 ELAKGNAVQNDYRIQDAWNNLKRMENLYKEGAISKQQYELALLQYNLSLNTPTEAQVKQA 171

Query: 161 YRSLKMKLTRM 171
             ++ +   ++
Sbjct: 172 QANVDLIKAQI 182


>gi|295111363|emb|CBL28113.1| Multidrug resistance efflux pump [Synergistetes bacterium SGP1]
          Length = 343

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 96/282 (34%), Gaps = 34/282 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR--LDLENKSSLLRALLSSHQK 197
           D L        ++            K  L ++   +      +   +   ++A L   +K
Sbjct: 76  DLLSILDPVPYRIKRSEARGAMLQAKAALDKLHRGFRTEEVREAAAQRDRVQASLDLAEK 135

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D + + NLF + AV++++L++                  Q+N LR      + A      
Sbjct: 136 DYSRISNLFAQKAVAKSELDRA---------------SSQRNALRAELAAAENALALMRE 180

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
             +    D+E  +  +    ++    E       + SP  GTI+  +           Q 
Sbjct: 181 GYR--REDIEAAEAAYEAASARFAAAENALSDTELRSPADGTILT-RVTEPGTVVGAGQ- 236

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS-- 375
           ++  +   +   +RA +   Q+  V+ G  A +      D      +  +  I P     
Sbjct: 237 VVYALALERPIQVRAYIPEPQLGRVRVGMPAQIV----TDSSPAPIEGTLTFISPTAEFT 292

Query: 376 ---QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
               Q  +L+T   Y   + + D    D +  L+NG P  VL
Sbjct: 293 PKQVQTEDLRTDLVYRARILVED----DRDGRLKNGMPVTVL 330



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 9/123 (7%)

Query: 54  DNVVEIKSPFS----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
            NV   +        G ++    E G ++  G  L   + +         + ++   +  
Sbjct: 44  GNVEIRQVLLGFRVSGRVEAVYREEGERVASGDLLSILDPVPYRIKRSEARGAMLQAKAA 103

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +D           +      A   R +  LD   K +S  S +F     +V +S   + +
Sbjct: 104 LDKLHRGF---RTEEVREAAAQRDRVQASLDLAEKDYSRISNLFAQ--KAVAKSELDRAS 158

Query: 170 RMR 172
             R
Sbjct: 159 SQR 161


>gi|254415998|ref|ZP_05029754.1| cyclic diguanylate phosphodiesterase (EAL) domain protein
           [Microcoleus chthonoplastes PCC 7420]
 gi|196177173|gb|EDX72181.1| cyclic diguanylate phosphodiesterase (EAL) domain protein
           [Microcoleus chthonoplastes PCC 7420]
          Length = 712

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 144/390 (36%), Gaps = 30/390 (7%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +    ++  +G +G+   SI   +   V   G  +    +V +++P +G I+ F  + G 
Sbjct: 276 VGTGFVVLGLGAVGVGIASIGYRLSHLVV-DGSTI-NGRIVRLQAPTTGNIQAFYAQPGV 333

Query: 77  QILQGTPLLTF----EDIETTDLIDLKKVSI-KNLRCHIDT--EKSALDFLNNKYDVLEK 129
            +  G  L          E   L+ L++    + +R  +++   +  +     +    ++
Sbjct: 334 VVKSGQLLARISQEPSPQEQEALLRLERAQDQEQIRNQLESLELQGQIQVNATQLASAKQ 393

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           +    + QL     +  +        G+ SV     +           RLD +   +LL 
Sbjct: 394 SLALLKTQLQQLERRDQAVRQVDVELGLDSVKEQQAVVQAAQAKAEAARLDYQRYQTLLE 453

Query: 190 ALLSSHQKDLTM---MKNLFEKNAVSQNDLNQQERIVYKSTLELREN---------IHEQ 237
           A   S Q+   +    ++   +   +Q+ L+  ++ V  +   +  +         + +Q
Sbjct: 454 AGGVSAQETDQLRLVWQSAQAEVQQAQSVLDATQKAVNAAQAGIARSNRNNIMGGVLSDQ 513

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQN---QRTFADEMSKLTILEKTREQKTILS 294
           +  L+   +            L ++ + L  +   Q+     ++ L  L+  R+ + + +
Sbjct: 514 RISLQQTIQQQSVVVNTMEAQLAKLKQQLNNSQSLQKNAPSLVNDLKQLQSERKIQNVSA 573

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P AG +VY           Q +P++ ++      ++   V+ +Q   +      TV    
Sbjct: 574 PFAG-VVYTAEREQGEQVNQLEPIVTLL-DCNNLWVETVVSAEQASSINTDKPVTVGLAG 631

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           YA       K  I+ I PI + Q  N  TQ
Sbjct: 632 YAQT----VKGEIDLIQPISNMQQLNKLTQ 657


>gi|70731482|ref|YP_261223.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
 gi|68345781|gb|AAY93387.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
          Length = 369

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/373 (11%), Positives = 98/373 (26%), Gaps = 69/373 (18%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            ++V I    +G +   +V +   +  G  L   +D +    ++  + +++         
Sbjct: 56  SDIVTIAPRVAGYLVAVEVRDNQPLKAGDLLARIDDSDYRARVEQAEAALRE-------- 107

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                                                        +    L     R + 
Sbjct: 108 ---------------------------------------AQAEQRAGQARLANLAARQQQ 128

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 + + +     A      ++    ++L  +   S   L     +  ++   L   
Sbjct: 129 QQSLIAEAQARVGAAEAEAQRAGQEGRRQQHLASQQVSSVQQLENAAALARQADAALGAA 188

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                   + +  L  E         +     L++ +   A   ++  +      +  I 
Sbjct: 189 RASLAARRQQVQVLDTE--------QQSARAQLDKLEAGVARVTAQRQLARIDLARTLIR 240

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ G I   +      Y +   PL+ +VP     Y+ A     Q+  ++ G  A V   
Sbjct: 241 SPVDG-IAGQRRLRLGQYVEVGAPLLAVVPEDA--YVVANYKETQVDGMRPGQAARVEVD 297

Query: 354 HYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
                     +  +E   P          +       T+    + ++I          +L
Sbjct: 298 ALGGH---VLEGRVESFAPASGAEFALLPADNATGNFTKIVQRMPVRIRLDPGQPRQAQL 354

Query: 406 RNGFPAEVLFTAK 418
           R G    V    +
Sbjct: 355 RPGMSVVVTVDTR 367


>gi|320102174|ref|YP_004177765.1| RND family efflux transporter MFP subunit [Isosphaera pallida ATCC
           43644]
 gi|319749456|gb|ADV61216.1| efflux transporter, RND family, MFP subunit [Isosphaera pallida
           ATCC 43644]
          Length = 511

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 116/355 (32%), Gaps = 60/355 (16%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G+ + +G  +   +  E  ++          L+  ++ E+S  +    + D+  + 
Sbjct: 102 LVPEGTLVRKGDVICELDSSEYVEM---------ELQQTLEVEESRFELRQAELDL--EV 150

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            E+   + LD L                                     + + + +L  +
Sbjct: 151 AEAARHEFLDGLAP-------------------------------QTLENYQGQLALAES 179

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                   +   K + ++  +S + L  +ER + K+ L+++  I     + R        
Sbjct: 180 DQVRLVDRVEWTKRMVDRGYMSLSQLRSEERNLAKAQLDVQR-ILRSFQVYRDYTIPRQR 238

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY-----NQS 305
           A LE +   ++    +E  +R      ++L  + +     TI +P  G ++Y     ++ 
Sbjct: 239 AGLEASILSRK--SIVESRRRRLERHENRLEQIRQMIANCTIRAPHDGMVIYANDDPDRP 296

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                    +Q L  + P  +     A++    +  VK G  A VR     D     F  
Sbjct: 297 MVEGAQVYTNQKLFFL-PDLEHMEAVARLNESVVHQVKPGMKARVRTESMPDRT---FIG 352

Query: 366 IIEKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           ++  +D              + Y+  +K+           L  G  +E+   A  
Sbjct: 353 VVSSVDEFPEPPVRGRPMDVKTYKAHIKLD-----GGVNGLLPGMNSEIEIVADQ 402


>gi|116071084|ref|ZP_01468353.1| Secretion protein HlyD [Synechococcus sp. BL107]
 gi|116066489|gb|EAU72246.1| Secretion protein HlyD [Synechococcus sp. BL107]
          Length = 372

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 94/268 (35%), Gaps = 30/268 (11%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND--LNQQERIVYKS 226
           T  R      +    +   ++ +  S ++   +   L ++  V + +  L   +R     
Sbjct: 48  TAERGSLSGVVTASGELQAIQKVNVSPRQQGLLQTLLVDEGDVVKANQILAVMDRGDLND 107

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEF-------ANYLKEISRDLEQNQRTFADEMSK 279
            L+ RE + +Q      I +   E   +        A+    +  ++   Q        +
Sbjct: 108 RLQEREALLQQAKAQYRIKKQEYERRNKLFEMAVISADDFSTVQNEMLARQAAMTAAQER 167

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--------IVPHSKLTYIR 331
           +  LE+T+ +  I +P AGTI   +      +   +             IV  S+   + 
Sbjct: 168 VEQLEQTKRELDIRAPFAGTITA-RYAEPGAFVTPTTAASATAGATSSSIVELSQGLEVS 226

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A+V    I  +  G  A +R   + D R   F+A + +I P   +Q+N +  +       
Sbjct: 227 ARVPESDIGRIAIGQAAQIRVDAFPDER---FQARVSEIAPRAVKQENVISFEV------ 277

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
               LA  +   +L  G   +V F    
Sbjct: 278 ---QLALMNPPKKLLIGMTTDVDFQTGR 302



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/274 (9%), Positives = 84/274 (30%), Gaps = 19/274 (6%)

Query: 47  SGEILNEDNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           SG +     +  I+         G+++   V+ G  +     L   +  +  D +  ++ 
Sbjct: 55  SGVVTASGELQAIQKVNVSPRQQGLLQTLLVDEGDVVKANQILAVMDRGDLNDRLQEREA 114

Query: 102 SIKNLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            ++  +     +K   +  N  ++   +    F + + ++L       +   +V     +
Sbjct: 115 LLQQAKAQYRIKKQEYERRNKLFEMAVISADDFSTVQNEMLARQAAMTAAQERVEQLEQT 174

Query: 159 SVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                ++       +         +   ++      ++    + + + L     V ++D+
Sbjct: 175 KRELDIRAPFAGTITARYAEPGAFVTPTTAASATAGATSSSIVELSQGLEVSARVPESDI 234

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
               RI      ++R +    +     ++E+   A  +      E+   L    +     
Sbjct: 235 ---GRIAIGQAAQIRVDAFPDERFQARVSEIAPRAVKQENVISFEVQLALMNPPKKL--- 288

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              L  +    + +T  S I   +      +   
Sbjct: 289 ---LIGMTTDVDFQTGRSAIKTLVPTVAIVTEGG 319


>gi|116053306|ref|YP_793630.1| multidrug resistance protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115588527|gb|ABJ14542.1| multidrug resistance protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 394

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 86/269 (31%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + ++R ++ N      + +  +  L+  + D    KNL +  A+SQ +
Sbjct: 95  ALQRAEANLAHTVRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQEE 154

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   L  +    +  L     L D+  +     +K  +  L Q     A 
Sbjct: 155 LAHARDALDSAKASLTSS----EQQLNTNRALVDDTQITSHPDVKAAAAQLRQAYLDDA- 209

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        + TI++P+ G +   +S       Q    LM +VP     +I A   
Sbjct: 210 -------------RSTIVAPVTGYVAK-RSVQVGQRVQPGNALMAVVPLD-QIWIDANFK 254

Query: 336 PKQIQHVKKGYTATVRFPHY--ADIREKKFKAI-IEKIDPIISQQDNNLQTQ-----EYY 387
             Q++H++ G    +R   Y           ++ +            N         +  
Sbjct: 255 ETQLKHMRIGQPVEIRSDLYGSDVRYSGTVDSLGVGTGSAFSLLPAQNATGNWIKIVQRV 314

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + I       + + +      +V   
Sbjct: 315 PVRIHIDPQELQKHPLRIGLSMDVKVDLH 343



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            NVV+I     G +     ++G  + +G  L+ F+  +         ++++    ++   
Sbjct: 54  GNVVQITPQIVGTVVSIGADDGDLVRKGQELVRFDPSDAD-------IALQRAEANLAHT 106

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              +  L +  D       +R+  L      Y    +   +  IS     L      + S
Sbjct: 107 VRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQ--EELAHARDALDS 164

Query: 174 IYLNRLDLENKSSLLRALLSSHQ 196
              +    E + +  RAL+   Q
Sbjct: 165 AKASLTSSEQQLNTNRALVDDTQ 187


>gi|87310625|ref|ZP_01092753.1| probable multidrug resistance transmembrane protein
           [Blastopirellula marina DSM 3645]
 gi|87286606|gb|EAQ78512.1| probable multidrug resistance transmembrane protein
           [Blastopirellula marina DSM 3645]
          Length = 514

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 46/395 (11%), Positives = 129/395 (32%), Gaps = 35/395 (8%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V  +    SG +    V++  ++ +G  LL  +       + LK+  ++    ++ 
Sbjct: 81  VDGHVTFVAPRVSGQVLNVLVDDNVRVQKGDLLLQIDPEPYETDVALKEAQVRVAEANLS 140

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T ++ ++ +  +      A E   E + + +    S  ++      S V         R 
Sbjct: 141 TAEAQVEGIVAQTRSNRFALEHAMESVRNQIAVLRSNVAQAKVEEASLVLAQRN--FDRN 198

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA------VSQNDLNQQERIVYK 225
           R +  + +  +++  +  A L+  +  +   K + ++        +++ +       + +
Sbjct: 199 RKLATDNVIAQSEFDVYTAQLAEAESRVDSAKEVVQQTRSALGLPINEANPLDMPADLDQ 258

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKE-----ISRDLEQNQRTF------- 273
           +   +RE +      +  I       +L     + +     +S DL+   +         
Sbjct: 259 NFSVVRETLANLMQSIAEIGYRPKSWDLTPNQAIDDFFHLNVSGDLDTIYKQLIADAPAI 318

Query: 274 -------ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                       +L + +       I+S I G +         N+ Q  + ++  V    
Sbjct: 319 KQAAAALLQAQRQLDLAKLNLRYCNIVSDIDGVVTRRNVN-PGNFVQSGESVLA-VRSLT 376

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--KKFKAIIEKIDPIISQQDNNLQTQ 384
             ++ A     Q+ +++ G    +    Y   R+   +           +        T 
Sbjct: 377 EIWVNANFKETQLNNLRIGQRVDLHVDMYGRERQFHGRISGFTMGTGQTLELLPPQNATG 436

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLF 415
            + +++    ++I  L +  +   L  G       
Sbjct: 437 NFVKIVQRLPVRIDLLEYDPDEAPLFAGLSVTPYV 471


>gi|160885830|ref|ZP_02066833.1| hypothetical protein BACOVA_03834 [Bacteroides ovatus ATCC 8483]
 gi|156108643|gb|EDO10388.1| hypothetical protein BACOVA_03834 [Bacteroides ovatus ATCC 8483]
          Length = 356

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 97/285 (34%), Gaps = 31/285 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL    + +    K     +   + S  +  + + + + N    +   +  +A L   ++
Sbjct: 87  LLVLDNREYQIKVKEAEAALLDAHGSQDVLHSGIETSHTNIAVQDANIAEAKAKLWQLKQ 146

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D    + L ++ +V +    Q +     +    +  + +++  L    E   +     A 
Sbjct: 147 DYHRFERLLKEESVPEQQYEQAKAAYEAAKARYQALVAQKQAALSQYAETSKKTTGTEAA 206

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L++                + L + +       + +P  G +   ++     Y Q  Q 
Sbjct: 207 ILRK---------------EADLDLAKLNLSYTVLTAPYDGYM-GRRTLEPGQYVQTGQT 250

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID------ 371
           +  +V  +K  +I A     QI ++  G    ++      +  K F   +  I       
Sbjct: 251 ISYLV-RNKDKWITANYKETQIANIYIGQQVRIKVDA---VPGKIFHGEVTAISEATGSK 306

Query: 372 ----PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
               P  +   N ++ Q+   V + + D++  +   +LR G   E
Sbjct: 307 YSLVPTDNSAGNFVKVQQRIPVRIDLEDVS-PEEMAQLRAGMMVE 350



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 51/154 (33%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+ + +    + QG  LL  ++ E    +   + ++ +     D   S ++  +  
Sbjct: 67  SGYIKEVRFKEHQYVHQGDTLLVLDNREYQIKVKEAEAALLDAHGSQDVLHSGIETSHTN 126

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             V +      + +L      YH     +    +                     L  + 
Sbjct: 127 IAVQDANIAEAKAKLWQLKQDYHRFERLLKEESVPEQQYEQAKAAYEAAKARYQALVAQK 186

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +++L +   +S +   T    L ++  +    LN
Sbjct: 187 QAALSQYAETSKKTTGTEAAILRKEADLDLAKLN 220


>gi|303328238|ref|ZP_07358676.1| heat shock protein HtpX [Desulfovibrio sp. 3_1_syn3]
 gi|302861568|gb|EFL84504.1| heat shock protein HtpX [Desulfovibrio sp. 3_1_syn3]
          Length = 331

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 57/411 (13%), Positives = 120/411 (29%), Gaps = 97/411 (23%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS----PFSGII 67
           + P  ++ + +L+I+   G + W +          SG++    NV   +        G I
Sbjct: 2   HIPRKIQVIAVLAILTGAGFLAWHLF-----GARQSGDLTLYGNVDIRQVDLGFRVGGRI 56

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V+ G  + +G PL                  + +       +++A      K D+ 
Sbjct: 57  AAVLVDEGDAVSEGQPLAR----------------LDDDLLRQQRDQAAAKLAGQKADLA 100

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                 R E++        +  +   N  I+                             
Sbjct: 101 RLERGYRVEEIAQARASVVAATAVAENASIN----------------------------- 131

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                      L  +  +   NA+SQ +L+       ++  +LR    +   +     E 
Sbjct: 132 -----------LKRVAAMRASNAISQKELDNARAAEREAAAKLRSAQDQLDMLTSGYRE- 179

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                            D+   +   A   ++L   E       + +P  G I+  ++  
Sbjct: 180 ----------------EDVLAQRAAVAAADAELNHAEIQVRDAVLAAPQKGIILT-RARE 222

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
           +    Q  Q +  +   +   ++RA V    +  VK G +  V          K F   +
Sbjct: 223 AGAIVQAGQTVYTLT-LTNPVWLRAYVDEPNLGRVKPGMSVRV---AVDAAPGKTFPGTV 278

Query: 368 EKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             I P       + +   ++T   Y + +++ D            G P  +
Sbjct: 279 GFISPTAEFTPKTVETREVRTALVYRLRVQVEDPENVMRQ-----GMPVTI 324


>gi|253996847|ref|YP_003048911.1| RND family efflux transporter MFP subunit [Methylotenera mobilis
           JLW8]
 gi|253983526|gb|ACT48384.1| efflux transporter, RND family, MFP subunit [Methylotenera mobilis
           JLW8]
          Length = 514

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 20/212 (9%)

Query: 210 AVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            VS   +  Q   +   +  L+L    +E++  L       ++  L+    L+E    L+
Sbjct: 244 VVSSQGIADQRSDLMAAQKRLDLARVTYEREKKLWEEKISAEQDYLQEKQDLQEAEISLQ 303

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + ++      + L        +  I SPI G I   Q  S+          + +V     
Sbjct: 304 RAKQKLQSIGAGL-GASNNLTRYEIKSPIDGVITDKQI-SAGQVLN-GDESIFVVADLST 360

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
            +    +  K +  VK G   TVR   +           +  +  ++ +Q          
Sbjct: 361 LWAEMTIYAKDVNAVKVGQKVTVRATAFEAQTT----GTVAYVGALVGEQSRTAMA---- 412

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            V+LK  D  +         G P  +   A  
Sbjct: 413 RVVLKNADKVW-------LPGLPVNIELQADE 437



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 35/105 (33%), Gaps = 12/105 (11%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI++      G ++ +G  L+        D            R  +   +  LD     Y
Sbjct: 223 GIVESVSANAGDKVHKGQLLVVVSSQGIADQ-----------RSDLMAAQKRLDLARVTY 271

Query: 125 DVLEKAFESREEQLLDFLGKYHSTC-SKVFNYGISSVYRSLKMKL 168
           +  +K +E +     D+L +      +++         +S+   L
Sbjct: 272 EREKKLWEEKISAEQDYLQEKQDLQEAEISLQRAKQKLQSIGAGL 316


>gi|77456371|ref|YP_345876.1| secretion protein HlyD [Pseudomonas fluorescens Pf0-1]
 gi|77380374|gb|ABA71887.1| putative HlyD family efflux pump protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 356

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 83/258 (32%), Gaps = 17/258 (6%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              + R  L+N  + L    S   +    + +   + A +Q +LN+   +       ++ 
Sbjct: 94  QTLVARAQLQNAKATLERQSSVIAQAQASVVSAKAEMAFAQQELNRYNHLAGVGAGTVQ- 152

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEIS---RDLEQNQRTFADEMSKLTILEKTREQ 289
           N  + +  +   +   D A  + A   K++       +  + +     + L I       
Sbjct: 153 NAQQARTRIDQASARLDTATAKLAAERKQVEILTAQRDAAEGSLKHAQAALEIASFELSY 212

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I +P  G I   ++     Y      L+ +VP  +   + A     Q+  V+ G    
Sbjct: 213 TRITAPQDGMI-GERAVRVGAYVTPGSKLLAVVPLKQAYVV-ANFQETQLTDVQPGQDVV 270

Query: 350 VRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNN--- 402
           VR         +     +E I P      +    +  T  + +V+ +I            
Sbjct: 271 VRVDSLG---GEALTGRVESIAPATGVTFAAVKPDNATGNFTKVVQRIPVKVLLYPGQPL 327

Query: 403 -IELRNGFPAEVLFTAKN 419
              LR G   E     K+
Sbjct: 328 AERLRVGMSVEASIDTKS 345



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/254 (10%), Positives = 73/254 (28%), Gaps = 9/254 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +   +    +G IK+  VE+  Q+  G  L   +D +     +         R  + 
Sbjct: 44  VSADFTLVVPRVAGFIKEVLVEDNQQVKAGQLLALIDDRDLRAAAEAADAQTLVARAQLQ 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             K+ L+  ++     + +  S + ++     +             +   ++ +   TR+
Sbjct: 104 NAKATLERQSSVIAQAQASVVSAKAEMA--FAQQELNRYNHLAGVGAGTVQNAQQARTRI 161

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                       K +  R  +          +    K+A +  ++   E    + T    
Sbjct: 162 DQASARLDTATAKLAAERKQVEILTAQRDAAEGSL-KHAQAALEIASFELSYTRITAPQD 220

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR---- 287
             I E+   +        +           +  + ++ Q T       + +   +     
Sbjct: 221 GMIGERAVRVGAYVTPGSKLLAVVPLKQAYVVANFQETQLTDVQPGQDVVVRVDSLGGEA 280

Query: 288 --EQKTILSPIAGT 299
              +   ++P  G 
Sbjct: 281 LTGRVESIAPATGV 294


>gi|332188520|ref|ZP_08390240.1| efflux transporter, RND family, MFP subunit [Sphingomonas sp. S17]
 gi|332011425|gb|EGI53510.1| efflux transporter, RND family, MFP subunit [Sphingomonas sp. S17]
          Length = 462

 Score = 72.7 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 65/215 (30%), Gaps = 19/215 (8%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS----- 278
                + R  + E +  L  + ++Y  +N    +   E+       QR  A         
Sbjct: 126 QAQVAQARATVAEAQAQLARLEQVYKLSNGRVPSA-TELQAGRADAQRAVAALRVAEANV 184

Query: 279 -----KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKLTYIR 331
                +L   +  R++  I SP++G ++  Q       A    +  L  I        + 
Sbjct: 185 AAARAQLAQSQTQRQRAIIRSPVSGVVLARQVDPGQTVAASFNTPTLFVIAEDLTKMKLE 244

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY---- 387
             +    +  VK G  A      +           ++    +      +  +        
Sbjct: 245 VAIDEADVGEVKVGQKANFTVDAFPGRTFPATITRVDLGSNLTVSAATSSTSSTASTTST 304

Query: 388 --EVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +V+    DL  ++ +++LR G  A       + 
Sbjct: 305 AGQVVSYAADLTVANPDLQLRPGMTATADIVTSDK 339



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 55/171 (32%), Gaps = 11/171 (6%)

Query: 28  IIGLITWSILL-------PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
             G    +           + ++VS++G++     V  + S  SG++ K  V+   ++  
Sbjct: 41  CFGGSDEAGFATAPVTRGNLTVTVSATGKLAPTSQV-TVGSQLSGLVTKVVVDVNDRVRA 99

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE---SREEQ 137
           G  L   +  +  D I   + ++   +  +   ++ +     +   LE+ ++    R   
Sbjct: 100 GEALALIDPEQIDDQIRAGQATLNANQAQVAQARATVAEAQAQLARLEQVYKLSNGRVPS 159

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             +           V    ++    +              R  + +  S +
Sbjct: 160 ATELQAGRADAQRAVAALRVAEANVAAARAQLAQSQTQRQRAIIRSPVSGV 210


>gi|300776817|ref|ZP_07086675.1| HlyD family secretion protein [Chryseobacterium gleum ATCC 35910]
 gi|300502327|gb|EFK33467.1| HlyD family secretion protein [Chryseobacterium gleum ATCC 35910]
          Length = 367

 Score = 72.7 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 49/372 (13%), Positives = 122/372 (32%), Gaps = 69/372 (18%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
             N+  + S  SG + + +V++   + +G  L+  ++         +K++++  +  + T
Sbjct: 53  ASNMAPVISKISGYVAEVKVKDNQFVKKGDTLVILDN-------RDQKMALEQAQAALST 105

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            KS +           K   S E  ++    +  +    V+                   
Sbjct: 106 AKSNISNAEAATTATSKNIGSSEAAVITANAQIEAAKVNVW------------------- 146

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                      K+S      ++  KD ++ +  +E+   ++   ++Q +++     ++ +
Sbjct: 147 -----------KTSQDLKRYANLVKDHSITEQQYEQALAAKQSADKQLQVLVDQRNQIAQ 195

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
             H   +     ++    A                  QR    E ++L           I
Sbjct: 196 QTHIASSQTAASSQQISVAGS-------------VAKQREVDVENARLN-----LSYTVI 237

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           L+P  G +    + +   Y Q    L  +V + +   + A     Q+  + +G    +  
Sbjct: 238 LAPEDGYVGKVPTQA-GQYLQAGSQLFALVKNDQKWVV-ANFKETQVDKMVEGQKVKIEI 295

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNI-- 403
             + D    +F+ ++    P           +  +  + +V+ ++    D    D NI  
Sbjct: 296 DAFPDQ---EFEGVVSSFSPATGATFSILPPDNASGNFVKVVQRLPVKIDFVNLDKNIAK 352

Query: 404 ELRNGFPAEVLF 415
            LR G   +   
Sbjct: 353 RLRTGMNVKAEV 364


>gi|294338691|emb|CAZ87022.1| Multidrug resistance protein A EmrA [Thiomonas sp. 3As]
          Length = 421

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 93/297 (31%), Gaps = 19/297 (6%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D  +       + L+   G       +     ++   R +++      ++       +  
Sbjct: 90  DADDTQLVKSGQPLVQLDGADTHVALQQAEALLAQAVRQVRVSFANNGTLAAQVAVRQTD 149

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S+ +A ++  Q  L   + L    AV   +L Q +  +  +   L       K     +
Sbjct: 150 VSVAQANVAKAQDALRRRQELAGTGAVGAEELRQAQIALQSAQAALTTAQAGVKAAQEQL 209

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                                   N  +     +KL       E+ TI +P++G +V  +
Sbjct: 210 AASEALTAGTVI-----------ANNPSVKLAAAKLREAYLAYERTTIPAPVSG-VVARR 257

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA--DIREKK 362
           +          QPLM +VP +   +I A +   Q++ V+ G  ATV    Y         
Sbjct: 258 TVQLGQRVAPGQPLMWVVPLND-VWIDANLKETQLRDVRIGQKATVTADTYGGSFTYTGH 316

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLF 415
              +        S       T  + +V+    +++        +  LR G   EV  
Sbjct: 317 VVGLSAGTGAAFSLLPAQNATGNWIKVVQRLPVRVALDPKQVASHPLRVGMSTEVTI 373


>gi|220904761|ref|YP_002480073.1| secretion protein HlyD family protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869060|gb|ACL49395.1| secretion protein HlyD family protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 332

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/352 (13%), Positives = 99/352 (28%), Gaps = 78/352 (22%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I    V+ G+ +++G  L   +                             D L  +
Sbjct: 53  GGRIADVLVDEGASVVRGQALACLD----------------------------ADMLTQQ 84

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D      E +   L+     Y           +S+     +     +R +   R     
Sbjct: 85  RDEAAAYLEGQRAALMRLERGYRVEEIAQARASVSAATALAENAAINLRRVVAMRS---- 140

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                                    NA+SQ +L+       +++ +LR    +   +L  
Sbjct: 141 ------------------------SNAISQKELDNARAQSREASAKLRSAQDQLDMLLSG 176

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E                  D+   + +     + L   E       + +P  G ++  
Sbjct: 177 YRE-----------------EDVLAQRASVDAAAAALKRAEIQLNDAVLTAPQKGVVLT- 218

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++  +    Q  Q +  +   +   ++RA V   ++  +K G    V          K F
Sbjct: 219 RAREAGAIVQSGQTVYTLT-LTDPVWLRAYVDEPELGRIKPGMPVRVLVDA---APGKSF 274

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              +  I P        ++T++    ++    +   D    +R G P  +L 
Sbjct: 275 PGTVGFISPTAEFTPKTVETRQVRTALVYRLRVQVEDPENVMRQGMPVTILV 326


>gi|209695987|ref|YP_002263917.1| membrane protein, putative periplasmic component of a bacterial
           drug efflux pump [Aliivibrio salmonicida LFI1238]
 gi|208009940|emb|CAQ80254.1| membrane protein, putative periplasmic component of a bacterial
           drug efflux pump [Aliivibrio salmonicida LFI1238]
          Length = 370

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 86/234 (36%), Gaps = 30/234 (12%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           ++ + L A +++  +++     L +K A     + +++ I      +L   + + K +  
Sbjct: 80  DRETTLGAQVAAQIEEI-----LVKKGA----QVKKEQPIARLDMADLDLQLSQVKAIYS 130

Query: 243 -HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             + E      L       E++    Q+Q + A+  +++   E   +  TI++P  G + 
Sbjct: 131 VRMKEFKASKELRRKGLQGEVA--FSQSQASLAEAKARVRNAELILKNTTIVAPFDGIVE 188

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
           +       ++  +  P+ K+V       I   V+ + I  +       V F     I + 
Sbjct: 189 HLFV-EVGDFVSRGDPVAKVV-VLDPLVIEVNVSERHIIQLNVNQKTRVSF-----INDS 241

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  +  I  + S   N       + V ++I ++        L  G   EV  
Sbjct: 242 SIEGRVRYISRVSSISTNT------FPVEIEIPNIGD-----RLPAGISTEVEI 284



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 4/126 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I++  V+ G+Q+ +  P+   +       +DL+   +K +      E  A   L  K   
Sbjct: 93  IEEILVKKGAQVKKEQPIARLD----MADLDLQLSQVKAIYSVRMKEFKASKELRRKGLQ 148

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E AF   +  L +   +  +    + N  I + +  +   L      +++R D   K  
Sbjct: 149 GEVAFSQSQASLAEAKARVRNAELILKNTTIVAPFDGIVEHLFVEVGDFVSRGDPVAKVV 208

Query: 187 LLRALL 192
           +L  L+
Sbjct: 209 VLDPLV 214


>gi|260555673|ref|ZP_05827893.1| secretion protein HlyD [Acinetobacter baumannii ATCC 19606]
 gi|260410584|gb|EEX03882.1| secretion protein HlyD [Acinetobacter baumannii ATCC 19606]
          Length = 377

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 92/284 (32%), Gaps = 29/284 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  + K   ++A     
Sbjct: 107 QVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVEQVKAQYELS 166

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              L   + L    A S+++         K+  +   N+   K    ++        L  
Sbjct: 167 LAQLRRYQQLGNSGAASKSE-------QDKAAADAENNLAALKQAEANV--------LVA 211

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              LK         +   +   ++L   + T++   I++P+ G  +   +     Y    
Sbjct: 212 KEALKTAQVAEAGLEAQVSSAKAQLDQAQTTKDYSVIVAPMDGQ-LGEVNPRVGQYVAAG 270

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P        A     QI +++ G  A         ++ KKF   +E+I P   
Sbjct: 271 SQLLYLIPQQTWVI--ANFKETQIANMRIGQKAWFTVDA---MKHKKFTGHVEQISPAAG 325

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPA 411
            +      +  T  + +V+    ++IT     +    LR G   
Sbjct: 326 SEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGIEHLRPGMSV 369



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 93/270 (34%), Gaps = 13/270 (4%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P     +  +  + IIG++   W+  + P   SV  +     +     + S  +G +K  
Sbjct: 36  PTKRSTLLWMLGVLIIGILVILWAWRIGPFATSVQQTDNSYVKGKTTILSSQINGYVKDV 95

Query: 71  QVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            V++   + +G  L+  +         +    ++  K ++ N    I  +++ +     K
Sbjct: 96  LVKDFDHVKKGQVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAK 155

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            + ++  +E    QL  +    +S  +       ++        L  ++    N L  + 
Sbjct: 156 VEQVKAQYELSLAQLRRYQQLGNSGAASKSEQDKAAADAE--NNLAALKQAEANVLVAKE 213

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   +  +  ++  K   ++   ++ D +     +     E+   + +       
Sbjct: 214 ALKTAQVAEAGLEAQVSSAKAQLDQAQTTK-DYSVIVAPMDGQLGEVNPRVGQYVAAGSQ 272

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  L  +     AN+ +    ++   Q+ +
Sbjct: 273 LLYLIPQQTWVIANFKETQIANMRIGQKAW 302


>gi|307130285|ref|YP_003882301.1| membrane fusion component of tripartite multidrug resistance system
           [Dickeya dadantii 3937]
 gi|306527814|gb|ADM97744.1| Membrane fusion component of tripartite multidrug resistance system
           [Dickeya dadantii 3937]
          Length = 392

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 80/269 (29%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +      L   + ++R +Y    + + + +  +  L     D    K L  K A+S  D
Sbjct: 95  ALQQSEAQLASVVRQVRGLYSTVDNYQAQVASRQVALQQAVGDYNRRKGLMAKGAISAED 154

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  V  +   L       +     ++    + + E  N + ++             
Sbjct: 155 LAHYQDAVNSARSALDAAEQALRTNQAMVDNTVLDDHPEIKNAVADLRSKYLD------- 207

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        +  I++P++G +   ++            LM IVP     ++ A   
Sbjct: 208 -----------WARSAIVAPVSGYVAK-RAVQVGMRVSTGATLMTIVPLD-QVWVDANFK 254

Query: 336 PKQIQHVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPIISQQDNNLQTQEYY 387
             Q+ H++ G   T+    Y D                    + P  +   N ++  +  
Sbjct: 255 ESQMLHMRLGQPVTLTADLYGDKTVYHGTIQSLGIGTGSAFSLLPAQNASGNWIKIVQRL 314

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + +         + +     A V   
Sbjct: 315 PVRIALDPEGLKQRPLRIGLSMQASVDLH 343



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 12/138 (8%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N++ +     G + +  V++G  + +G  L+     +T        ++++     + 
Sbjct: 52  VGGNLITLTPQVGGTVTQVSVDDGDYVEKGQLLVQLSPSDT-------LIALQQSEAQLA 104

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           +    +  L +  D  +    SR+  L   +G Y+     +    IS+            
Sbjct: 105 SVVRQVRGLYSTVDNYQAQVASRQVALQQAVGDYNRRKGLMAKGAISAE-----DLAHYQ 159

Query: 172 RSIYLNRLDLENKSSLLR 189
            ++   R  L+     LR
Sbjct: 160 DAVNSARSALDAAEQALR 177


>gi|91779360|ref|YP_554568.1| major facilitator superfamily multidrug efflux pump membrane fusion
           protein [Burkholderia xenovorans LB400]
 gi|91692020|gb|ABE35218.1| MFS multidrug efflux pump, membrane fusion protein, EmrA subfamily
           [Burkholderia xenovorans LB400]
          Length = 375

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 90/292 (30%), Gaps = 21/292 (7%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V +  F    + L+    + +          + S   ++     +         +   + 
Sbjct: 79  VRDNQFVHANQVLIRLDARDYDARLAQATAEVQSAQAAVIELQAKKSLQLATINEQAAEV 138

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L+    D T  + L +  AVS   + + +  + K+   +  +        R I 
Sbjct: 139 RASGAELTRSAADQTRYRELVKDEAVSNQVVERADADLTKAHAAVDRSNAALVAAQRQIA 198

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L                  +   +   A   +   +     E  TI SPI G +  N++
Sbjct: 199 VL---------------DAQIGDAEARIATAQAAQRVAALNVEYTTIRSPIDGYV-GNRT 242

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A     L+ +VP S   +I A     Q++ ++ G +  V     +       ++
Sbjct: 243 ARVGLLANTGVSLLTVVPSSG-LWIDANFKEDQLKKMRVGDSVDVDLDASSRRIHGIVES 301

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEV 413
           +        S       T  + +++    +++      D    LR G  A V
Sbjct: 302 LAPATGATFSVLPAENATGNFTKIVQRVPVRVRLDVPKDMQGVLRPGLSATV 353


>gi|300728013|ref|ZP_07061389.1| periplasmic component of efflux system [Prevotella bryantii B14]
 gi|299774728|gb|EFI71344.1| periplasmic component of efflux system [Prevotella bryantii B14]
          Length = 394

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 76/225 (33%), Gaps = 21/225 (9%)

Query: 204 NLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           ++ +K  V     + +LN Q      +    +  +  +       + LY +  +   +Y 
Sbjct: 80  SIVKKGQVIAELDKTNLNSQLNTAKANLASAQSKLAYELANYNRYHTLYKKGLVSADDYE 139

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---Q 316
             +     Q + T       +   +      TI SP+ G ++  +S         S    
Sbjct: 140 NALLA-YNQAKATLKTSKESVAQAQTNLSYATITSPVDGIVLS-KSVEEGQTVAASFSTP 197

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  I        + A V    I +VK+G         + D     F   + ++    + 
Sbjct: 198 ELFTIAQDLTKMRVIANVDEADIGNVKQGDKVKFTVDAFPDDT---FHGSVTQVRQEATT 254

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +N +     YEV++     +  +N+++L+ G  A V  +     
Sbjct: 255 TNNVVT----YEVVI-----SAENNDLKLKPGLTANVTISTSEKV 290



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 70/176 (39%), Gaps = 4/176 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V+++G I    +V  + +  SGII K  V+  S + +G  +   +       ++  
Sbjct: 45  LESTVTATGTIEPVTSV-TVGTQVSGIIDKLYVDYNSIVKKGQVIAELDKTNLNSQLNTA 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K ++ + +  +  E +  +  +  Y     + +  E  LL +     +  +   +   + 
Sbjct: 104 KANLASAQSKLAYELANYNRYHTLYKKGLVSADDYENALLAYNQAKATLKTSKESVAQAQ 163

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
              S     + +  I L++   E ++        S  +  T+ ++L +   ++  D
Sbjct: 164 TNLSYATITSPVDGIVLSKSVEEGQTVAASF---STPELFTIAQDLTKMRVIANVD 216


>gi|197295318|ref|YP_002153859.1| efflux system transport protein [Burkholderia cenocepacia J2315]
 gi|195944797|emb|CAR57402.1| efflux system transport protein [Burkholderia cenocepacia J2315]
          Length = 462

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/396 (10%), Positives = 119/396 (30%), Gaps = 79/396 (19%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +    +L ++ + GL+ W      E +  +      + N + +    SG + +  V++ +
Sbjct: 126 IILGAVLIVLLVGGLVWWLATRNQESTDDAY----TDGNAIAVAPHVSGYVTRLAVDDNT 181

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L+  +  +    +D         +  +   ++ LD    + D           
Sbjct: 182 FVRRGDVLVEIDPRDYRAQVD-------AAQAQLGLAQAQLDAARVQLD----------- 223

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                          +      + YR  + ++    + Y   L  + +   + A  +S Q
Sbjct: 224 ---------------IARVQYPAQYRQARAQIESAEAAYRQALAAQARQRAVDARATSQQ 268

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                             D    +R    + + + +      +++               
Sbjct: 269 ----------------AIDAADAQRATADANVAMAQAQARTASLVPQ------------- 299

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             +++    +E+ ++      ++L           + +P  G +         ++ Q   
Sbjct: 300 -QIRQAETAVEERRQQVLQARAQLETANLNLSYCEMRAPSDGWVTRRNV-QLGSFLQPGT 357

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----D 371
            +  IV  +   +I A     Q++ ++ G    V    Y D+        ++ I      
Sbjct: 358 SIFSIV--TPRVWITANFKESQLERMRIGDRVDVSVDAYPDL---DLHGHVDSIQLGSGS 412

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
              +    N     + +++ ++      D  +  R 
Sbjct: 413 RFSAFPTENATGN-FVKIVQRVPVKIVLDGPLPTRP 447


>gi|301061240|ref|ZP_07202022.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [delta proteobacterium NaphS2]
 gi|300444559|gb|EFK08542.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [delta proteobacterium NaphS2]
          Length = 353

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/356 (14%), Positives = 97/356 (27%), Gaps = 88/356 (24%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+K  V+ G  +  G  +   + I                         A   +  K 
Sbjct: 57  GRIEKLSVQEGDAVKPGQLVAELDPIRYE-----------------AAVAKASAEVAAKN 99

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            VL +       +++                                        +   +
Sbjct: 100 QVLSRLLAGSRPEVV---------------------------------------REARER 120

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                A L+  +     MK L    + S+   +  ER                K    ++
Sbjct: 121 VKAEEANLADAKALYERMKFLVRTGSTSKQKFDDAERAF--------------KAARANL 166

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                E  L      KE   D+   +       + L + E+      + +P AG I  N+
Sbjct: 167 KAAKQELILAVKGPRKE---DIALARAQLRAGEAALKLAERELTDTKLYAPEAGVIQ-NR 222

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                + A    P+  +   +   ++RA ++   +  V  G  A +    +   +    +
Sbjct: 223 ILEPGDMAFPETPVFTLA-LTNPVWVRAYISEPDLGKVAPGMRAYLTTDSFPGKKY---E 278

Query: 365 AIIEKIDPIIS-----QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             I  I P         Q   L+T+  Y + +        +   ELR G P  V  
Sbjct: 279 GWIGFISPTAEFTPKQVQTTELRTKLVYRLRI-----YACNPRNELRLGMPVTVTV 329


>gi|322832678|ref|YP_004212705.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
 gi|321167879|gb|ADW73578.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
          Length = 374

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/359 (13%), Positives = 100/359 (27%), Gaps = 68/359 (18%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V +  ++  G  L+  +  E T  +   +  +++ R  +              
Sbjct: 69  GFVSTVLVRHNQRVHAGDKLVLIDSEEFTARLASAQGELEDARAQVTQ------------ 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                    +E  LL    +     +++     +      + +                 
Sbjct: 117 ---------QEAALLSQQAQEQLALTQIEAARTAIRSSRAEQQHAEAEQQRYQ------- 160

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                              +L    A S+ND ++ + +    T E           +   
Sbjct: 161 -------------------SLAVSGATSRNDADRYKTV--AVTAEQTSAHAAAMLDVAQN 199

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                 A         EI   L   +       +   + ++     TI++ I G I  N+
Sbjct: 200 QAAVTHAR------RAEIQAALALAKAAVVKAQAAQALAQQDLNHTTIVAAIDG-IAGNR 252

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                +Y    Q LM +VP     Y+ A     Q   ++ G  A V       +    F+
Sbjct: 253 QVQVGDYVTPGQRLMTLVPEQG-IYVTANFKETQTGRMQPGQRADVHVDALPGVT---FR 308

Query: 365 AIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             ++ + P        +  +      T+    V ++I   A   +   LR G   +   
Sbjct: 309 GEVDSLAPGSGSTFALLPFEPGTGNFTKIVQRVPVRIRLDAGQPDLAALRPGLSVDARV 367


>gi|302135008|ref|ZP_07260998.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato
           NCPPB 1108]
          Length = 428

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/423 (11%), Positives = 121/423 (28%), Gaps = 94/423 (22%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI----TWSI---LLPIEISVSSSGEILNEDNVVEIKSP 62
            R+    +    +   + + G++     W       PIE + ++      +     I   
Sbjct: 31  PRSTRKRVVSSVIFGAVALAGVLLVLYAWQFPPFASPIESTENAQ----VKGQTTLIGPQ 86

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG + +  V++   +  G  L+  +D        + +  +      +  +K++L     
Sbjct: 87  LSGYVYEVPVQDFQFVKAGDLLVRLDD-------RIYRQRLDQALAQLAVQKASLANNLQ 139

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +    E     R+ +L + + +   + +                                
Sbjct: 140 QRRSAEATIGQRQAELQNSIAQSRKSAA-------------------------------- 167

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                          DL   + L    +VS+++L+       ++   + E          
Sbjct: 168 ---------------DLRRNQALVTDGSVSKSELDVTRAADAQANAAVAEAKAVLLIARE 212

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +  +           +   S +        A E++++       +   I++P  G +  
Sbjct: 213 DLQTVI----------VNRGSLEASVANAQAAIELARI-----DLDNTRIVAPRDGQLGQ 257

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP  +     A +   Q+ +V+ G   +            +
Sbjct: 258 IGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKETQMANVRLGQPVSFTVDALDGR---E 311

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVL 414
               +++I P    +      +  T  + ++  +I      D +      LR G    V 
Sbjct: 312 MHGHVQRISPAAGSEFSLLPADNATGNFVKISQRIPVRIVVDADQPMLEHLRPGMSVVVS 371

Query: 415 FTA 417
              
Sbjct: 372 IDT 374


>gi|322435493|ref|YP_004217705.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX9]
 gi|321163220|gb|ADW68925.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX9]
          Length = 471

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/390 (13%), Positives = 102/390 (26%), Gaps = 97/390 (24%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
             V+ +G+I  +  V  I +   G I    V+ G  + +G  L T E+I+ T  +     
Sbjct: 46  SVVTGTGQIKPKTYV-NIGATAFGRITHLNVKEGDHVKKGATLATVENIQPTATV----- 99

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                                                        +          ++V 
Sbjct: 100 ---------------------------------------------AAQQATIASSKTNVT 114

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             +  + T   +I   R DLE +       L            L+    +++ D + ++ 
Sbjct: 115 ADVAAEQTAHANIAAARADLEQRKLDYDRALE-----------LYNDKLIAKQDFDAKKA 163

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
           +   S   L + I  +       N      N   A+                        
Sbjct: 164 VYDASVATLDQRIASESQARAQTNSQRAMVNQAVASQRSNF------------------- 204

Query: 282 ILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTP 336
                 ++    +P  G +         +        +   LM +     +     KV  
Sbjct: 205 ---DALDKTVSRAPFDGLVTNVPVREGETMVIGIQNAEGSTLMTLA-DMSVITAEVKVDE 260

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIE-----KIDPIISQQDNNLQTQEY-YEVI 390
             I +V    TA +          K     +      +   + + Q      +   ++V+
Sbjct: 261 TDIVNVAMNQTAEITVDALPGRIFKGHVTEVGDQALLRTTGVATSQSTTGTEEAKDFKVV 320

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + I ++    NN ELR G       T    
Sbjct: 321 VTIDNVD-GQNNDELRPGLSTTAKITTARR 349


>gi|189465574|ref|ZP_03014359.1| hypothetical protein BACINT_01932 [Bacteroides intestinalis DSM
           17393]
 gi|189437848|gb|EDV06833.1| hypothetical protein BACINT_01932 [Bacteroides intestinalis DSM
           17393]
          Length = 300

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 87/247 (35%), Gaps = 33/247 (13%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y +       ++S+   R D+  + +  +  +S+ Q++   + NL +  A +Q  L+ 
Sbjct: 71  QLYLTKLQLEASIKSVEEQRPDILKQVAATKEQISAAQRERNRVANLLKVGAANQKQLDD 130

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E  +     +L        N  + +        ++ A                      
Sbjct: 131 AEDQLEVLRKQLVAQNSTLSNSHQSLTWQSSSVGIQVAQ--------------------- 169

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E   ++  I SPI GT++  +   +        PL K V  ++  Y+RA +T +Q
Sbjct: 170 ----VEDQLKKCHITSPITGTVLA-KYAEAGELTAMGTPLFK-VADTEQMYLRAYITSEQ 223

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV F  Y     K++  ++  I              N +    Y V + +
Sbjct: 224 LSQVKLGQKVTV-FSDYGTDEHKQYPGVVTWISDTSEFTPKTILTKNERANLVYAVKIAV 282

Query: 394 TDLAFSD 400
            +     
Sbjct: 283 HNDGLLK 289


>gi|167894520|ref|ZP_02481922.1| putative multidrug resistance protein [Burkholderia pseudomallei
           7894]
          Length = 390

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 89/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 76  QVALQQAEANLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 135

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 136 EE------------------ISHARDAVKAAQASLDAAGQQLASNRALTANTTVADHPNV 177

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 178 LAAAAKVRDAYLNNARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWVDAN 235

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 236 FKEVQLKHMRIGQPVELTADIYGSSVKYHGKVIGFSAGTGAAFSLLPAQNATGNWIKVVQ 295

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++      ++ + +      +V   
Sbjct: 296 RLPVRVELDPKELKEHPLRIGLSMQVDVDIK 326



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 35  VNGNVVQITPQVTGTVIAVKADDTQTVKSGDPLVVLDPADSQVALQQAEANLAQTVRQVR 94

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L   L   +  +   +  ++   +V  +      
Sbjct: 95  GLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASLDA 154

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 155 AGQQLASNRALTAN 168


>gi|262394127|ref|YP_003285981.1| multidrug resistance efflux pump [Vibrio sp. Ex25]
 gi|262337721|gb|ACY51516.1| multidrug resistance efflux pump [Vibrio sp. Ex25]
          Length = 271

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 82/276 (29%), Gaps = 29/276 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            ++    +      L     +     +     +       A       +   +  L +K 
Sbjct: 13  QEIARAALDVAKSELTANQIKTDMQLMKIEQAKQGIRRASANAEHQAAEFQRLSRLVQKQ 72

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +VS+N    Q+    +++  L           + ++ L  E     A   K         
Sbjct: 73  SVSKNQFEAQKTRSIEASSNLETAKLGLAAEQKQLDTLMTEKLQLTAQRKK--------- 123

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                   + L +   + E+ T+ +P  G +   Q      + Q    L+ +VP     +
Sbjct: 124 ------AEANLRLANISLERTTVRAPFDGYVADRQV-QVGKFVQPGMGLIVMVP--DYVW 174

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQE 385
           I A     Q+++V  G    V    + +         +  I P    Q         T  
Sbjct: 175 IEANFKETQLENVVPGQEVEVVLDMFPNH---PLHGRVSSITPATGAQFSLLPPQNATGN 231

Query: 386 YYEVI----LKITDLAFSDNNIELRNGFPAEVLFTA 417
           + +V+    ++I      + +  +  G  AEV    
Sbjct: 232 FVKVVQRVPVRIELEIPQELSQRVYPGLSAEVSIET 267


>gi|226312590|ref|YP_002772484.1| hypothetical protein BBR47_30030 [Brevibacillus brevis NBRC 100599]
 gi|226095538|dbj|BAH43980.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 389

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/385 (13%), Positives = 115/385 (29%), Gaps = 49/385 (12%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G I+  + +        G +    V+   ++ +G  +L  +  +    I      I++  
Sbjct: 38  GSIITAEQINVSFQQVGGKVTNVGVQEEMEVKRGDVMLQLDPTDVNLQIAKVTSDIQSTD 97

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             I   + ++        + E+  E++E Q    +    +  SK+               
Sbjct: 98  IRIKQMQDSI-------RIGEQKIETQESQASLGIRSAQTAESKILEG------------ 138

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
            TR   +   RL ++  S  L+    + Q +   + +L+E  AV +  L+     V  + 
Sbjct: 139 -TRKEELEKQRLAVDTASESLK----NAQTNYDRIHSLYESGAVPKASLDTAYLQVTSAK 193

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA------------- 274
             L++     + M R   +   +   +           + Q++                 
Sbjct: 194 NSLKQQDETYRQMSRGAQQQDKDLARQATEKAMLGLEVVAQSKAELQNSAMGIDLLIKSR 253

Query: 275 -DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                +L  L   +++ T+ +P  G IV     +         P+  I+  +   Y    
Sbjct: 254 EALQIQLESLRVQKDRLTLRAPHDGKIVKVIPKT-GENVSAGVPV--ILLETNQIYYDFY 310

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE--KIDPIISQQDNNLQTQEYYEVIL 391
           V   Q    K G +                K I    +   +   ++        +++ +
Sbjct: 311 VDETQAAKFKVGQSVAGHLVSTDQDITGMIKFITAAPQFASLRMSREKGQSDLNTFQIRV 370

Query: 392 KITDLAFSDNNIELRNGFPAEVLFT 416
                        +  G   EV   
Sbjct: 371 YPERTK------NILPGMTIEVNIK 389


>gi|313895984|ref|ZP_07829538.1| efflux transporter, RND family, MFP subunit [Selenomonas sp. oral
           taxon 137 str. F0430]
 gi|312975409|gb|EFR40870.1| efflux transporter, RND family, MFP subunit [Selenomonas sp. oral
           taxon 137 str. F0430]
          Length = 370

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 69/215 (32%), Gaps = 28/215 (13%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI----SRDLEQNQRTFADEMSKL 280
           ++   L    +E K            A     NYL  I     +DLE  Q  +    S L
Sbjct: 88  QTVATLDGKDYEAKRDQAQYRVTNTRAKYNRMNYLAGIGAKSQQDLEDAQYNYETAQSTL 147

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPK 337
                   +  I +PI+G +V     + +   Q S     +M+I        I+AKV   
Sbjct: 148 EEAVSDANETIITAPISGVVVGEPKTAGTMAVQGSDNPTVIMRIA-DLSRKQIKAKVDET 206

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE------------ 385
            I +++ G  AT     + D +   F A + KI         +  +              
Sbjct: 207 DIGNIRVGQDATFTVDAFTDQK---FTARVSKISQTDVSNSWDTSSSSSSSSSSSSASVI 263

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           YY V L + D         L     A V+    + 
Sbjct: 264 YYYVTLDVDDPDSM-----LLPAMTARVVINTADK 293



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 1/121 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+ +V ++G I   D+V E+ S  +  I    V+    +  G  + T +  +     D  
Sbjct: 47  IKSTVEATGTIQPVDSV-EVSSKITARISSVLVKENDTVTAGQTVATLDGKDYEAKRDQA 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  + N R   +               LE A  + E                +    IS 
Sbjct: 106 QYRVTNTRAKYNRMNYLAGIGAKSQQDLEDAQYNYETAQSTLEEAVSDANETIITAPISG 165

Query: 160 V 160
           V
Sbjct: 166 V 166


>gi|268316212|ref|YP_003289931.1| efflux transporter, RND family, MFP subunit [Rhodothermus marinus
           DSM 4252]
 gi|262333746|gb|ACY47543.1| efflux transporter, RND family, MFP subunit [Rhodothermus marinus
           DSM 4252]
          Length = 425

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 70/224 (31%), Gaps = 26/224 (11%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT- 272
             L+Q       ST         Q     +     DEA L+ A    E    L   QR  
Sbjct: 145 VQLSQSGAAGIDSTRLAEARRAWQAAQEAYARGEIDEAALDEARQRYEALLLLSGAQREA 204

Query: 273 -------FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
                   A+   ++        +  I +P AG +   Q      +    Q LM+++   
Sbjct: 205 VRRVVTGLAEAEQRVARARLQLNRTRIRAPFAGRVADLQV-EVGRHVSPGQVLMQLL-DD 262

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           +   +   V    + H++ G +A VR P   D        ++  ++P I  +        
Sbjct: 263 RRMKVEVDVLEADLVHIRPGASAWVRLPALGDT---VVAGVVHTVNPRIDPKTGAG---- 315

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
              V + + +         L  G  A V       TL   ++ P
Sbjct: 316 --RVTVAVPNPE-----GRLLAGMFAYVALET--RTLPDRLVVP 350



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 2/152 (1%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           ++G +       EI +  SG + + +VE G ++  G  L+  +D E    +   + ++  
Sbjct: 80  ATGTLAPWRQT-EISAEISGRVVERRVEEGDRVAAGQVLVVLDDEEARLALAEAEAALLK 138

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFES-REEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            R     + S           L +A  + +  Q     G+              ++    
Sbjct: 139 ARSEYAVQLSQSGAAGIDSTRLAEARRAWQAAQEAYARGEIDEAALDEARQRYEALLLLS 198

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             +   +R +     + E + +  R  L+  +
Sbjct: 199 GAQREAVRRVVTGLAEAEQRVARARLQLNRTR 230


>gi|39933592|ref|NP_945868.1| efflux pump protein FarA [Rhodopseudomonas palustris CGA009]
 gi|39647438|emb|CAE25959.1| possible efflux pump protein FarA [Rhodopseudomonas palustris
           CGA009]
          Length = 389

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 100/295 (33%), Gaps = 27/295 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +E Q +    +        F   ++     L    T   ++  N         L+ A ++
Sbjct: 94  KEGQRVQPGDELFQIDPVPFRLAVAQAQAKLADAKTSHANLVANVKLYGQTIDLVNAGIA 153

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q+D+    +L +  A SQ DL+     +  +  +L+    +Q      +N+L  +  L
Sbjct: 154 LKQRDVERKTSLVQSRAGSQLDLDNSTAALVTAQAQLQLVKQQQSTA---LNQLLGDPEL 210

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               +              +A   + L   E+     T+ +P++GT     +     +  
Sbjct: 211 PLEKF------------PAYAQAKAALDDAERNLRLSTVRAPMSGTATQVDNIQLGRFVA 258

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              P+  ++  +   ++ A        +V  G T T+    + D +   FK  +  + P 
Sbjct: 259 AGTPVFSVI-DTTQPWVDANPKESDFTYVAVGQTVTLDVDAFPDHQ---FKGRVSSLSPG 314

Query: 374 ISQQ----DNNLQTQEYYEVILKIT-DLAFSDNN---IELRNGFPAEVLFTAKNT 420
              Q         T  + +V+ ++   +A  + +     L+ G    V     + 
Sbjct: 315 TGAQFAVLPPQNATGNFVKVVQRVPLRIALDETDPMIKRLKAGMSVNVAIDTHHR 369


>gi|239501269|ref|ZP_04660579.1| putative multidrug resistance efflux pump [Acinetobacter baumannii
           AB900]
          Length = 381

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 91/284 (32%), Gaps = 29/284 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  + K   +RA     
Sbjct: 111 QVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVEQVRAQYELS 170

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              L   + L    A S+++         K+  +   N+   K    ++        L  
Sbjct: 171 LAQLRRYQQLGNSGAASKSE-------QDKAAADAENNLAALKQAEANV--------LVA 215

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              LK         +   +   ++L   + T++   I +P+ G  +   +     Y    
Sbjct: 216 KEALKTAQVAEAGLEAQVSSAKAQLDQAQTTKDYSVIAAPMDGQ-LGEVNPRVGQYVAAG 274

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P        A     QI +++ G  A         ++ KKF   +E+I P   
Sbjct: 275 SQLLYLIPQQTWVI--ANFKETQIANMRIGQKAWFTVDA---MKHKKFTGHVEQISPAAG 329

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPA 411
            +      +  T  + +V+    ++IT     +    LR G   
Sbjct: 330 SEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGMEHLRPGMSV 373



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 92/270 (34%), Gaps = 13/270 (4%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P     +  +  + IIG++   W+  + P   SV  +     +     + S  +G +K  
Sbjct: 40  PTKRSTLLWMLGVLIIGILVILWAWRIGPFATSVQQTDNSYVKGKTTILSSQINGYVKDV 99

Query: 71  QVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            V++   + +G  L+  +         +    ++  K ++ N    I  +++ +     K
Sbjct: 100 LVKDFDHVKKGQVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAK 159

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            + +   +E    QL  +    +S  +       ++        L  ++    N L  + 
Sbjct: 160 VEQVRAQYELSLAQLRRYQQLGNSGAASKSEQDKAAADAE--NNLAALKQAEANVLVAKE 217

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   +  +  ++  K   ++   ++ D +     +     E+   + +       
Sbjct: 218 ALKTAQVAEAGLEAQVSSAKAQLDQAQTTK-DYSVIAAPMDGQLGEVNPRVGQYVAAGSQ 276

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  L  +     AN+ +    ++   Q+ +
Sbjct: 277 LLYLIPQQTWVIANFKETQIANMRIGQKAW 306


>gi|260436565|ref|ZP_05790535.1| secretion protein HlyD [Synechococcus sp. WH 8109]
 gi|260414439|gb|EEX07735.1| secretion protein HlyD [Synechococcus sp. WH 8109]
          Length = 357

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 106/271 (39%), Gaps = 38/271 (14%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           T  R +    +    +    + +  S ++   + + + ++  V +N+    + +      
Sbjct: 34  TAERGVLSGVISASGELQAQQKVNVSPRQPGLLAELMVDEGDVVENE----QVLAVMDRG 89

Query: 229 ELRENIHEQKNMLRHINELYDEANLEF-------------ANYLKEISRDLEQNQRTFAD 275
           +L + + E++ +LR  +  +     EF             A+       DL   Q     
Sbjct: 90  DLDDRLQEKQALLRQADANFKSRKEEFERKNQLFASGVISADEFSGARFDLLARQAGLVA 149

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--------IVPHSKL 327
             +++  LE+   +KTI +P +GTI   +     ++   +             IV  S+ 
Sbjct: 150 ARARVEQLEQESREKTIRAPFSGTITA-RYAEPGSFVTPTTAASATAGATSASIVELSQG 208

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +RA+V    I  ++ G TA +R   Y D R   F+A + ++ P  +++++       +
Sbjct: 209 LEVRARVPESDIGRIEPGQTAEIRVDAYPDER---FQATVSEVAPRAAKENSVTS----F 261

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           EV L      F +   +L+ G  A++ F   
Sbjct: 262 EVKLN-----FVNPQNKLKIGMTADINFQTG 287



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 84/239 (35%), Gaps = 9/239 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   +S+SGE+  +  V  +     G++ +  V+ G  +     L   +  +  D +  K
Sbjct: 40  LSGVISASGELQAQQKV-NVSPRQPGLLAELMVDEGDVVENEQVLAVMDRGDLDDRLQEK 98

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  ++    +  + K   +  N  +    +    F      LL       +  ++V    
Sbjct: 99  QALLRQADANFKSRKEEFERKNQLFASGVISADEFSGARFDLLARQAGLVAARARVEQLE 158

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             S  ++++   +   +         +   ++      ++    + + + L  +  V ++
Sbjct: 159 QESREKTIRAPFSGTITARYAEPGSFVTPTTAASATAGATSASIVELSQGLEVRARVPES 218

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           D+ + E      T E+R + +  +     ++E+   A  E +    E+  +    Q   
Sbjct: 219 DIGRIE---PGQTAEIRVDAYPDERFQATVSEVAPRAAKENSVTSFEVKLNFVNPQNKL 274


>gi|251788495|ref|YP_003003216.1| efflux pump membrane protein [Dickeya zeae Ech1591]
 gi|247537116|gb|ACT05737.1| efflux pump membrane protein [Dickeya zeae Ech1591]
          Length = 391

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 93/288 (32%), Gaps = 35/288 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL---RALLSSHQ 196
           DF+ K              +  RS       +R ++   +++    + +   +  L    
Sbjct: 82  DFVKKGDVLVELDPADAEQAFERSKTTLANSVRQVHQQMINVRQYKANIDLQQITLDQAI 141

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            DL   + L   NA+ + DL      V  +   L                    A  ++A
Sbjct: 142 SDLNRREALGRANAIGREDLQHARDQVASARASLEA------------------AKQQYA 183

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                +     + Q   A   + L       ++  I+SP+ G +   +S         S 
Sbjct: 184 ATQALVLNTPLEQQPAIAQASTDLRNAWLALKRTHIVSPVDGYVSR-RSVQLGARVTPSS 242

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----- 371
            LM +VP     ++ A     Q+ +++ G +AT+    Y D     +K  +  +D     
Sbjct: 243 ALMAVVPA-APLWVDANFKETQLANMRIGQSATITSDLYGD--TVVYKGKVVGLDMGTGS 299

Query: 372 -----PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
                P  +   N ++  +   V +++     +D  + +       V 
Sbjct: 300 AFSLLPAQNATGNWIKVVQRLPVRVELDPKQLADYPLRIGLSMLVNVD 347



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 66/197 (33%), Gaps = 18/197 (9%)

Query: 19  RMTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            M L   IG +    W ++L      + +  +        N V+I S  +G + +  V+N
Sbjct: 28  LMILFFFIGCVWFAYWYLVLRHHQETDDAYVA-------GNQVQIMSQVNGSVVRVNVDN 80

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L+  +  +     +  K ++ N    +  +   +       D+ +   +  
Sbjct: 81  TDFVKKGDVLVELDPADAEQAFERSKTTLANSVRQVHQQMINVRQYKANIDLQQITLDQA 140

Query: 135 EEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-----DLENKSSL 187
              L   + LG+ ++   +   +    V  +        +     +       LE + ++
Sbjct: 141 ISDLNRREALGRANAIGREDLQHARDQVASARASLEAAKQQYAATQALVLNTPLEQQPAI 200

Query: 188 LRALLSSHQKDLTMMKN 204
            +A        L + + 
Sbjct: 201 AQASTDLRNAWLALKRT 217


>gi|239626791|ref|ZP_04669822.1| predicted protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516937|gb|EEQ56803.1| predicted protein [Clostridiales bacterium 1_7_47FAA]
          Length = 229

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 54/150 (36%), Gaps = 11/150 (7%)

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           D + +  +L +      I SPI GT+V N   +++       PL  I   +   YI   V
Sbjct: 85  DLVEQDQVLGRQEVLPYITSPITGTVVKNDG-AANQTVAAGTPLAVIA-DTSNLYIGVNV 142

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVI 390
               I  +  G    VR   Y       FK  + +IDP      +   +   +  Y +V 
Sbjct: 143 EETDIMKIHLGQLVDVRLDAYPHRT---FKGQVTEIDPATQTYFTNTTSFSTSGTYTKVT 199

Query: 391 --LKITDLAFSDNNIELRNGFPAEVLFTAK 418
             + I     +  N+ L  G  A V    K
Sbjct: 200 QLIPIKVTIENKENLPLVFGMNASVKVHLK 229


>gi|34496222|ref|NP_900437.1| multidrug resistance secretion protein [Chromobacterium violaceum
           ATCC 12472]
 gi|34102076|gb|AAQ58443.1| multidrug resistance secretion protein [Chromobacterium violaceum
           ATCC 12472]
          Length = 382

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/305 (13%), Positives = 90/305 (29%), Gaps = 81/305 (26%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              ++V++     G + K  V++   +  G  L+++++ +                  + 
Sbjct: 48  VGGHLVQVTPEVGGTVAKILVDDTVAVKAGQVLVSYDNSD----------------AQLA 91

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E++  +F                                                + + 
Sbjct: 92  FERARNEF---------------------------------------------AQTVRQT 106

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           R +  N   L+ + +L +A LS  + DL   K L    A+S  +L               
Sbjct: 107 RQLMANSQQLDAQVALRQAELSRAESDLKRRKLLAGSEAMSAEEL--------------- 151

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                  + +         A  +    L  + +D   +Q       S+L       ++  
Sbjct: 152 ---GHASDAVAAAQAALAAAQEQAKAGLALVGKDELAHQPAVKAAASRLKEAWLALQRTE 208

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ GT+                PLM +VP  +  ++ A     Q+  ++ G    ++
Sbjct: 209 IKSPVNGTVARRNV-QVGQRVAAGTPLMAVVPL-EHLWVDANFKEGQLAKIRIGQPVELK 266

Query: 352 FPHYA 356
              Y 
Sbjct: 267 SDLYG 271


>gi|53719528|ref|YP_108514.1| putative multidrug resistance protein A [Burkholderia pseudomallei
           K96243]
 gi|52209942|emb|CAH35914.1| putative multidrug resistance protein A [Burkholderia pseudomallei
           K96243]
          Length = 411

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 89/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVKAAQASLDAAGQQLASNRALTANTTVADHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 LAAAAKVRNAYLNNARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSVKYHGKVIGFSAGTGAAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++      ++ + +      +V   
Sbjct: 317 RLPVRVELDPKELKEHPLRIGLSMQVDVDIK 347



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKSGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L   L   +  +   +  ++   +V  +      
Sbjct: 116 GLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASLDA 175

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 176 AGQQLASNRALTAN 189


>gi|163846743|ref|YP_001634787.1| RND family efflux transporter MFP subunit [Chloroflexus aurantiacus
           J-10-fl]
 gi|222524555|ref|YP_002569026.1| RND family efflux transporter MFP subunit [Chloroflexus sp.
           Y-400-fl]
 gi|163668032|gb|ABY34398.1| efflux transporter, RND family, MFP subunit [Chloroflexus
           aurantiacus J-10-fl]
 gi|222448434|gb|ACM52700.1| efflux transporter, RND family, MFP subunit [Chloroflexus sp.
           Y-400-fl]
          Length = 606

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/325 (13%), Positives = 93/325 (28%), Gaps = 17/325 (5%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           D    +       +    + L     +Y  +      RE+QL  F      +        
Sbjct: 208 DSLSAAKTRAESQLLQAANTLRDRQAEYSRIYNENREREQQLARFGQSLPQSALDTEAAA 267

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + +V  + +       +    R       +   A L S Q +L   + L   +       
Sbjct: 268 LRAVENAEEQMRQAQVAYEQARQAEITGIAQAEAQLRSAQANLE--RILAGADPDQVAAA 325

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             Q      +  +L  +         +      +ANL+          DL   +   A  
Sbjct: 326 RAQLAQAEANLNKLLGDQRAGSLAAANAAVASAQANLQRITAPPS-EADLASAEAQVASA 384

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + L   +   E+ T+ +PIAG +          +   ++P + ++      Y+   V  
Sbjct: 385 RASLAQAQLALERATLTAPIAGVVAEVNL-EVGEFYNAARPAV-VLADLSGYYVDVTVDE 442

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             +  +  G    +      ++     +  + +I+P+   Q         Y V +   D 
Sbjct: 443 IDVAQIAVGQPVILVLDALPNL---DLRGTVARINPLSIVQSGVTA----YTVRIVTDDP 495

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTT 421
                   +R G  A         +
Sbjct: 496 -----PASVRPGMSASADIIVAEKS 515



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 83/263 (31%), Gaps = 23/263 (8%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PI  +V++SG I     V+++    SG+I +  V+ G Q+  G  L   +  +    +D
Sbjct: 54  SPISATVNASGSIQP-QQVIDLTFASSGLISEVLVQVGDQVAAGQVLARLDTRDLELRVD 112

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR----------EEQLLDFLGKYHS 147
                +   +  +D  ++            + A              E+ L     +   
Sbjct: 113 QAAAQLAQAQASLDRLRAGPSAAEVAAAEAQLAQAQAQLRQTTGNVTEQDLAAARAQVEQ 172

Query: 148 TCSKVFN----YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             + +         S V ++         ++   R  L    +   + L      L   +
Sbjct: 173 ARANLERVLGGPKASEVAQAQAQVDQAAAALQAQRDSLSAAKTRAESQLLQAANTLRDRQ 232

Query: 204 ----NLFEKNAVSQNDLNQQERIVYKSTLELR----ENIHEQKNMLRHINELYDEANLEF 255
                ++ +N   +  L +  + + +S L+        +   +  +R     Y++A    
Sbjct: 233 AEYSRIYNENREREQQLARFGQSLPQSALDTEAAALRAVENAEEQMRQAQVAYEQARQAE 292

Query: 256 ANYLKEISRDLEQNQRTFADEMS 278
              + +    L   Q      ++
Sbjct: 293 ITGIAQAEAQLRSAQANLERILA 315


>gi|134282284|ref|ZP_01768989.1| multidrug resistance protein [Burkholderia pseudomallei 305]
 gi|167816036|ref|ZP_02447716.1| putative multidrug resistance protein [Burkholderia pseudomallei
           91]
 gi|167824411|ref|ZP_02455882.1| putative multidrug resistance protein [Burkholderia pseudomallei 9]
 gi|167902924|ref|ZP_02490129.1| putative multidrug resistance protein [Burkholderia pseudomallei
           NCTC 13177]
 gi|167911161|ref|ZP_02498252.1| putative multidrug resistance protein [Burkholderia pseudomallei
           112]
 gi|167919185|ref|ZP_02506276.1| putative multidrug resistance protein [Burkholderia pseudomallei
           BCC215]
 gi|226199716|ref|ZP_03795269.1| multidrug resistance protein [Burkholderia pseudomallei Pakistan 9]
 gi|254179978|ref|ZP_04886577.1| multidrug resistance protein [Burkholderia pseudomallei 1655]
 gi|254197819|ref|ZP_04904241.1| multidrug resistance protein [Burkholderia pseudomallei S13]
 gi|254297813|ref|ZP_04965266.1| multidrug resistance protein [Burkholderia pseudomallei 406e]
 gi|134246322|gb|EBA46411.1| multidrug resistance protein [Burkholderia pseudomallei 305]
 gi|157807821|gb|EDO84991.1| multidrug resistance protein [Burkholderia pseudomallei 406e]
 gi|169654560|gb|EDS87253.1| multidrug resistance protein [Burkholderia pseudomallei S13]
 gi|184210518|gb|EDU07561.1| multidrug resistance protein [Burkholderia pseudomallei 1655]
 gi|225928302|gb|EEH24336.1| multidrug resistance protein [Burkholderia pseudomallei Pakistan 9]
          Length = 411

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 89/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVKAAQASLDAAGQQLASNRALTANTTVADHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 LAAAAKVRDAYLNNARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSVKYHGKVIGFSAGTGAAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++      ++ + +      +V   
Sbjct: 317 RLPVRVELDPKELKEHPLRIGLSMQVDVDIK 347



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKSGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L   L   +  +   +  ++   +V  +      
Sbjct: 116 GLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASLDA 175

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 176 AGQQLASNRALTAN 189


>gi|242310150|ref|ZP_04809305.1| secretion protein HlyD [Helicobacter pullorum MIT 98-5489]
 gi|239523447|gb|EEQ63313.1| secretion protein HlyD [Helicobacter pullorum MIT 98-5489]
          Length = 350

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 65/426 (15%), Positives = 146/426 (34%), Gaps = 84/426 (19%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M  + W   K      +  +  ++I  ++ L  W  L P  ++V ++ +   + +   + 
Sbjct: 1   MKKYSWLPSKPKLFVIISTIVGMAIGVLLILYAWQ-LPPFFMNVVATNDAYIQSSTTILS 59

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG I +  V++   I +G PL   +         +    ++  R ++   ++AL   
Sbjct: 60  PQVSGYITEIYVKDFETIKEGQPLFQIDK-------RIFTQRVEEARANLTIAQNALKTY 112

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
              Y + E   + +E Q+            K     + ++    K     ++   L++ D
Sbjct: 113 AQDYLLHEANIKEKEAQI------------KAVEANLQNMQADFKRSKMLIKQQALSKRD 160

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            +N ++ L++                             +    ++  +L++ + E ++ 
Sbjct: 161 YDNAAANLKS----------------------------TQAQHIQAKAQLQQALQEFESF 192

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
               N+   EA ++ A  L E+                         +   I + IAG +
Sbjct: 193 KA--NQTTLEAEVKRAESLLEL--------------------ALIDLDNSLIKALIAGKL 230

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
               +     +  Q   L+ +VP     ++ A V   ++  VK G           D   
Sbjct: 231 GEIGA-KIGQFVSQDTALVYLVPKD--IWVIANVKETKMDKVKIGQKVVFSVDALNDN-- 285

Query: 361 KKFKAIIEKIDPIISQQDN----NLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAE 412
            +F  ++E+I P    + +    N  T  + +++ +I      D+N     +LR G    
Sbjct: 286 -EFSGVVEEISPATGSEFSAIKVNHATGNFIKIVQRIPVKIKIDSNQARLDDLRAGMSVV 344

Query: 413 VLFTAK 418
           V    +
Sbjct: 345 VEVHTQ 350


>gi|76811629|ref|YP_333319.1| multidrug resistance protein [Burkholderia pseudomallei 1710b]
 gi|126441188|ref|YP_001058783.1| multidrug resistance protein [Burkholderia pseudomallei 668]
 gi|126454488|ref|YP_001066036.1| multidrug resistance protein [Burkholderia pseudomallei 1106a]
 gi|167845942|ref|ZP_02471450.1| multidrug resistance protein [Burkholderia pseudomallei B7210]
 gi|217423491|ref|ZP_03454992.1| multidrug resistance protein [Burkholderia pseudomallei 576]
 gi|237812046|ref|YP_002896497.1| multidrug resistance protein A [Burkholderia pseudomallei MSHR346]
 gi|242314376|ref|ZP_04813392.1| multidrug resistance protein [Burkholderia pseudomallei 1106b]
 gi|254188611|ref|ZP_04895122.1| multidrug resistance protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254259021|ref|ZP_04950075.1| multidrug resistance protein [Burkholderia pseudomallei 1710a]
 gi|76581082|gb|ABA50557.1| multidrug resistance protein [Burkholderia pseudomallei 1710b]
 gi|126220681|gb|ABN84187.1| multidrug resistance protein [Burkholderia pseudomallei 668]
 gi|126228130|gb|ABN91670.1| multidrug resistance protein [Burkholderia pseudomallei 1106a]
 gi|157936290|gb|EDO91960.1| multidrug resistance protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|217393349|gb|EEC33370.1| multidrug resistance protein [Burkholderia pseudomallei 576]
 gi|237505938|gb|ACQ98256.1| multidrug resistance protein A [Burkholderia pseudomallei MSHR346]
 gi|242137615|gb|EES24017.1| multidrug resistance protein [Burkholderia pseudomallei 1106b]
 gi|254217710|gb|EET07094.1| multidrug resistance protein [Burkholderia pseudomallei 1710a]
          Length = 411

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 89/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVKAAQASLDAAGQQLASNRALTANTTVADHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 LAAAAKVRDAYLNNARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSVKYHGKVIGFSAGTGAAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++      ++ + +      +V   
Sbjct: 317 RLPVRVELDPKELKEHPLRIGLSMQVDVDIK 347



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKSGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L   L   +  +   +  ++   +V  +      
Sbjct: 116 GLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASLDA 175

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 176 AGQQLASNRALTAN 189


>gi|262373350|ref|ZP_06066629.1| conserved hypothetical protein [Acinetobacter junii SH205]
 gi|262313375|gb|EEY94460.1| conserved hypothetical protein [Acinetobacter junii SH205]
          Length = 387

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 98/297 (32%), Gaps = 31/297 (10%)

Query: 125 DVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           DVL K F+   + + L+      +         G+     SL  +   +     + +  +
Sbjct: 104 DVLVKDFDQVKQGQVLMHIDATTYDQKVTQAFSGVEQAENSLANQTQAIAQRQADVVAAQ 163

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            K   ++A        L   + L +  A S+++         K+  + + N+   K    
Sbjct: 164 AKLDQVKAQYDLSIAQLKRYQQLGDSGAASKSE-------QDKAAADAQNNLALLKQAQA 216

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
           +I        L     LK         +       ++L     T++  TI++P+ G  + 
Sbjct: 217 NI--------LVAQEALKTAQVAQAGLKAQVNSAQAQLDQANTTKDYSTIVAPLDGQ-LG 267

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
             +     Y      L+ ++P        A     QI ++K G  A          +   
Sbjct: 268 EVNPRVGQYVAAGTQLLYLIPKQTWVI--ANFKETQIANMKIGQKAYFTVDAMNHQK--- 322

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIE-LRNGFPA 411
           F   +E+I P    +      +  T  + +V+ +I     +  +   IE LR G   
Sbjct: 323 FTGHVEQISPAAGSEFSVLKPDNATDNFTKVVQRIAVRIAIDPNQKGIENLRPGMSV 379


>gi|32476869|ref|NP_869863.1| cobalt-zinc-cadmium resistance protein [Rhodopirellula baltica SH
           1]
 gi|32447417|emb|CAD79006.1| cobalt-zinc-cadmium resistance protein [Rhodopirellula baltica SH
           1]
          Length = 407

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/321 (15%), Positives = 105/321 (32%), Gaps = 35/321 (10%)

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           P  G+++   V+ G  + +G P+              +  SI   R  I +EK+ L+ L 
Sbjct: 18  PTDGVLESILVKTGDSVDRGQPVAVL-----------RSPSIGTARNQILSEKANLE-LA 65

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +    E    +    L   +        +  +    S+      +         ++ +L
Sbjct: 66  QEAYRWEADIHAGVSDLAKRIR-----AGEAIDAIKQSLQDKTIGEFGGQLLTMYSKSNL 120

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            N+ S               + +L    A+S   + +++    +S   L   I +     
Sbjct: 121 ANRLS-------------RSVDDLGGSGAISGRVVQERQSDRQQSEAMLEAAIEQSLFQT 167

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL--EKTREQKTILSPIAGT 299
           R      +    E    L+   + L     T AD M  L +   E    + TI SP++GT
Sbjct: 168 RQSMIQAEAKRNEAERRLRIAKQTLGTLLGTLADSMGGLDVSPNELDVSRLTIQSPLSGT 227

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I      +S   A Q++  + ++  +   ++ A +  +  + +  G    V       + 
Sbjct: 228 IESKAFSASERVAAQNE--LFVIADTSSLWVEADIRGRDWESIHVGQGDEVMVST-PAMN 284

Query: 360 EKKFKAIIEKIDPIISQQDNN 380
                A +  +   +      
Sbjct: 285 MPPHPATVYTVGRQVDPASGA 305


>gi|307710095|ref|ZP_07646539.1| transport protein comB [Streptococcus mitis SK564]
 gi|307619075|gb|EFN98207.1| transport protein comB [Streptococcus mitis SK564]
          Length = 449

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/434 (11%), Positives = 147/434 (33%), Gaps = 26/434 (5%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R +     R+ +   + ++ L+ ++     E+S+S+   +     +  I+S  +  I   
Sbjct: 14  RRYHNFSSRVIVPMSLLLVFLLGFATFAEKEMSLSTRATVEPSRILANIQSTSNNRILVN 73

Query: 71  QVENGSQILQGTPLLTF----EDIETTD------LIDLKKVSIKNLRCHI-DTEKSALDF 119
            +E    + +G  L+ +    E ++         ++  +K  ++ L+  + + E    + 
Sbjct: 74  HLEENKLVKKGELLVRYQEGAEGVQAEAYASQLDMLKDQKKQLEYLQKSLQEGENHFPEE 133

Query: 120 LNNKYDVLEKAFESREEQL---LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
               Y    + + S+   L        +  ++ +   +   + +   +     ++R    
Sbjct: 134 DKFGYQATFRDYISQAGSLRTSTSQQNETIASQNAAASQTQAEIGNLISQTEAKIRDYQT 193

Query: 177 NRLDLENKSSLLRALLS--SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            +  +E  +SL    L+   +Q   +  +   +  A +   +  Q   +  S    R   
Sbjct: 194 AKSAIETGASLASQNLAYSLYQSYKSQGEENPQAKAEAVAQVEAQLSQLESSLATYRVQY 253

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                   + + L  +     + +L ++ ++L    +   +  S   +     ++  I +
Sbjct: 254 AGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLDQKILEVESGKKVQGSLLDKGKITA 313

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVR 351
              G +  N   S S    +   L ++ P         + A ++ K +  VK G +    
Sbjct: 314 GEDGVLHLNPETSDSTMVAEGALLAQLYPSLEKEGKVKLTAYLSSKDVARVKIGDSVRYT 373

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              +    +    + I  ID   ++ +       ++++  +      ++   +LR G   
Sbjct: 374 -TTHDTKNQIFLDSTITSIDATATKTEKG----NFFKIEAETN--LTAEQAEKLRYGVEG 426

Query: 412 EVLFTAKNTTLAQE 425
            +       +    
Sbjct: 427 RLQMITGKKSYLSY 440


>gi|254243960|ref|ZP_04937282.1| multidrug resistance protein [Pseudomonas aeruginosa 2192]
 gi|296392014|ref|ZP_06881489.1| multidrug resistance protein [Pseudomonas aeruginosa PAb1]
 gi|126197338|gb|EAZ61401.1| multidrug resistance protein [Pseudomonas aeruginosa 2192]
          Length = 394

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 86/269 (31%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + ++R ++ N      + +  +  L+  + D    KNL +  A+SQ +
Sbjct: 95  ALQRAEANLAHTVRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQEE 154

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   L  +    +  L     L D+  +     +K  +  L Q     A 
Sbjct: 155 LAHARDALDSAKASLTSS----EQQLNTNRALVDDTQITSHPDVKAAAAQLRQAYLDDA- 209

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        + TI++P+ G +   +S       Q    LM +VP     +I A   
Sbjct: 210 -------------RSTIVAPVTGYVAK-RSVQVGQRVQPGNALMAVVPLD-QIWIDANFK 254

Query: 336 PKQIQHVKKGYTATVRFPHY--ADIREKKFKAI-IEKIDPIISQQDNNLQTQ-----EYY 387
             Q++H++ G    +R   Y           ++ +            N         +  
Sbjct: 255 ETQLKHMRIGQPVEIRSDLYGSDVRYSGTVDSLGVGTGSAFSLLPAQNATGNWIKIVQRV 314

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + I       + + +      +V   
Sbjct: 315 PVRIHIDPQELQKHPLRIGLSMDVKVDLH 343



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            NVV+I     G +     ++G  + +G  L+ F+  +         ++++    ++   
Sbjct: 54  GNVVQITPQIVGTVVSIGADDGDLVRKGQELVRFDPSDAD-------IALQRAEANLAHT 106

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              +  L +  D       +R+  L      Y    +   +  IS     L      + S
Sbjct: 107 VRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQ--EELAHARDALDS 164

Query: 174 IYLNRLDLENKSSLLRALLSSHQ 196
              +    E + +  RAL+   Q
Sbjct: 165 AKASLTSSEQQLNTNRALVDDTQ 187


>gi|86143667|ref|ZP_01062043.1| putative multidrug resistance protein [Leeuwenhoekiella blandensis
           MED217]
 gi|85829710|gb|EAQ48172.1| putative multidrug resistance protein [Leeuwenhoekiella blandensis
           MED217]
          Length = 353

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 94/288 (32%), Gaps = 31/288 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+           +     ++     L +  + + +   N    + +     A L   QK
Sbjct: 84  LVVLETNESEVSLQEAKAALAEAEAQLMVLESNVNTANSNATVNQAQIGAAEAKLWQQQK 143

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +    K L E  AV+Q      +  +  +   L               E          N
Sbjct: 144 EYERYKKLHEAEAVTQQQFEDVKTRLGVAKSNL---------------EAVKNTFNTSQN 188

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
              + S  +   +     + S L  ++       IL+P  G +   +   +  + Q+ Q 
Sbjct: 189 RSNDASTQIAVAKAHIEKQKSVLDRIQLELNYAVILAPSDGYM-GEKRLQAGQFVQKGQT 247

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L  IV  ++  ++ A     QI ++++G    ++   + D     F+ +IE + P    Q
Sbjct: 248 LSFIVDQTQGKWVIANFEETQIANLREGQPVNIQVDAFPDE---AFEGVIESLSPATGSQ 304

Query: 378 ----DNNLQTQEY------YEVILKITDLAFSDNNIELRNGFPAEVLF 415
                 +  T  +      + V +++       +  +LR G   EV  
Sbjct: 305 FSLMPPDNATGNFVKITQRFPVRIRLKKEQQDLS--KLRAGMNVEVAI 350


>gi|150018913|ref|YP_001311167.1| secretion protein HlyD family protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905378|gb|ABR36211.1| secretion protein HlyD family protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 327

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 84/239 (35%), Gaps = 35/239 (14%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                 +             +K+    K L +  A +Q  L    + +  +         
Sbjct: 119 EQISQAQATLDSANEAYDVAKKNYDRTKALVDAGANTQQQLEAAHQQLTTAE-------S 171

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           +QK+    +N L + A     +  K             A   + L   + T    T+ +P
Sbjct: 172 QQKSAQEQLNMLNNGATQTSIDVYK----------AQVAQAEAALKTAQTTLNNGTLTAP 221

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFPH 354
           I+G +V  +S +    A     L+ I  +     + A   P  I   +++G    V+   
Sbjct: 222 ISG-VVNAKSINVGEMASPGATLVSIS-NPDALVVNAY-APLDIAGQLQEGQDVVVKVSE 278

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             ++   +F   I  I+  ++ Q  N        +++K++    +D N +L+ G  AE+
Sbjct: 279 VDNV---EFDGKITVINSKLNSQSRN--------ILVKVS---LADPNSQLKPGMFAEI 323



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 56/170 (32%), Gaps = 9/170 (5%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE--DIETTDLIDLKKVSIKN 105
           G+I   D    I S  S  + +  V+ GS++  G  ++  +  D++         V   N
Sbjct: 48  GKIEANDQA-NIASKISARVSEVLVDVGSKVNAGDTIVKLDTQDLQAQVNQAQAAVDTAN 106

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF-LGKYHSTCSKVFNYGISSVYRSL 164
                    +  + ++     L+ A E+ +    ++   K            + + ++ L
Sbjct: 107 ATLTNAMNSTRPEQISQAQATLDSANEAYDVAKKNYDRTKALVDAGANTQQQLEAAHQQL 166

Query: 165 KMKLTRMRSIYLNRLDL-----ENKSSLLRALLSSHQKDLTMMKNLFEKN 209
               ++ +S       L     +    + +A ++  +  L   +      
Sbjct: 167 TTAESQQKSAQEQLNMLNNGATQTSIDVYKAQVAQAEAALKTAQTTLNNG 216


>gi|148256510|ref|YP_001241095.1| hypothetical protein BBta_5197 [Bradyrhizobium sp. BTAi1]
 gi|146408683|gb|ABQ37189.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 411

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 76/246 (30%), Gaps = 37/246 (15%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               R +L+  ++ +   + L+++  VS+ +    E+        +     +    L   
Sbjct: 132 VEAARTVLARLERKVNDTRQLYDRGIVSRVEFEAAEQERDNQAFTVATAEQDLTATLARG 191

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY-N 303
                      A+  +    +LE  +   AD        ++  +   + +P+AG IV   
Sbjct: 192 G----------ADSRRLAELELENAKARLADV-------QRQADGTIVRAPVAGVIVKPP 234

Query: 304 QSFSSSNY---------AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
              +S             Q+ Q L   V       +  KV    +  ++ G +  +    
Sbjct: 235 TVNASGAVPQTVETGARVQRGQTLFS-VADLSSLIVDGKVDEIDVNQIRIGQSVAISSDA 293

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           +  +     +  +  +    +Q   N      + V + I D    D    +R G  A + 
Sbjct: 294 FPGL---PLRGHVVGVSSEATQDSANQTAM--FNVRVLIDDTKKDD----IRIGMSARMT 344

Query: 415 FTAKNT 420
                 
Sbjct: 345 IELDAR 350


>gi|119492103|ref|ZP_01623556.1| PAS sensor diguanylate cyclase/phosphodiesterase [Lyngbya sp. PCC
           8106]
 gi|119453313|gb|EAW34478.1| PAS sensor diguanylate cyclase/phosphodiesterase [Lyngbya sp. PCC
           8106]
          Length = 940

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 55/315 (17%), Positives = 115/315 (36%), Gaps = 28/315 (8%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGI--IGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
            +     K N    L   T    + I  +G+   S+   +   V   G  +    +V ++
Sbjct: 367 KYATPEQKSNSVNRLLWGTAFVGVSIAALGIAVTSVWHRMSHIVVKHG--VVNGRLVRLR 424

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTE 113
           SPF G +++F    G Q+     L   E I       +  +  + + +S+ +      T 
Sbjct: 425 SPFYGHVREFYARPGVQVKADQILAHIEHIPDEENFYQKPERAEHQSISVLDFDSEPPTY 484

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ LD    KY+ LE      +++++   G+  +  +++          SL  +L  +R 
Sbjct: 485 ETLLDD-TKKYEKLEDQAYDIQQKIVRLQGELQTNQNQL--SASEQTVASLSTRLAEIRQ 541

Query: 174 IYLNRLDLENKSSLLR------------ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            Y     +E   S               A     + +    ++L  + AVS   ++Q + 
Sbjct: 542 KYQQLRTVEISISATEVPQSQADLDKALASAKLARTEYERFRDLRLEGAVSSQRVDQLQV 601

Query: 222 IVYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDLEQNQRTFADEMSK 279
               +  E+++   + K      N       ++ +++N L E +  LEQ     + +   
Sbjct: 602 AWETAQAEVQQAREQLKAAQVTYNASQMGLASDNKYSNALAEEADQLEQELEQESMKART 661

Query: 280 LTILEKTREQKTILS 294
           L       EQ+  L+
Sbjct: 662 LQAEVANLEQQLTLA 676



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 37/329 (11%), Positives = 102/329 (31%), Gaps = 37/329 (11%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           ++   +D    S K  R   +  +         + + D L+ A+E+ + ++     +  +
Sbjct: 560 QSQADLDKALASAKLARTEYERFRDLRLEGAVSSQRVDQLQVAWETAQAEVQQAREQLKA 619

Query: 148 TCS--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                     G++S  +           +         K+  L+A +++ ++ LT+ +NL
Sbjct: 620 AQVTYNASQMGLASDNKYSNALAEEADQLEQELEQESMKARTLQAEVANLEQQLTLAENL 679

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           +                  +     +E ++ Q+          ++         ++  + 
Sbjct: 680 YN----------------QRQAQMQQEQVNIQRIRQERQQRYEEQLAFHQQQVQQQEQQI 723

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
             +       +   +T L+       + +P   ++VY           +S+ ++ ++   
Sbjct: 724 QAEQIAQQQLQQQTITPLK-----TQLKAPFT-SVVYRTEREKGELVNKSEAVLSLL-DC 776

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
              ++ A +  +    +    +  VR         +  K  I+ I P+      +     
Sbjct: 777 NSLWVEAVIPAEDASRLDTQKSVQVRL----ANNSEILKGEIDLIQPVSVISTASQTGSF 832

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
                  I           L    PAE++
Sbjct: 833 -----ADIDKQGRRMQVQALSPTIPAELM 856


>gi|312961716|ref|ZP_07776214.1| HlyD family secretion protein domain protein [Pseudomonas
           fluorescens WH6]
 gi|311283975|gb|EFQ62558.1| HlyD family secretion protein domain protein [Pseudomonas
           fluorescens WH6]
          Length = 414

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 109/383 (28%), Gaps = 94/383 (24%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+I  +  +  + +PF G ++   VE G ++  G  LL  +       +         L 
Sbjct: 54  GKIEPDTTL-TLTAPFDGNVQANLVEQGQRVEAGQVLLRMDPATLEVQLR------DALS 106

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +   ++  +                         +   +   V     S     +   
Sbjct: 107 AQLKARRAVQEM------------------------QDWDSSPAVSRARRSLRTAEMSAG 142

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
            T+ +                          LT  +NLF++  + +N+L+  ++   +  
Sbjct: 143 NTQRK--------------------------LTESENLFKRGIIPRNELDDLKQQAQQQQ 176

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           L+L     E +  L      Y +                        +   K   L +  
Sbjct: 177 LDLVAARSELQQALDQGKGEYRQI-----------------ADMELTNATVKYEALRRLL 219

Query: 288 EQKTILSPIAGTIV-------------YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           E + I +P +G +V              N    +     Q Q L  +  + +   I AKV
Sbjct: 220 EGQEIKAPFSGIVVPAPGNHASQGGNDNNAPIQAGGKVSQGQVLFGLA-NIERLKIVAKV 278

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   I  + +G    V    +   R       +  +  +    D+    Q  + V L I 
Sbjct: 279 SELDINQLHQGQAVEVMGDGFDGER---LSGSVSVVSGLAVASDSQGSAQ--FPVTLSIP 333

Query: 395 DLAFSDNNIELRNGFPAEVLFTA 417
            L        +R G  A +    
Sbjct: 334 KLTPQQLQ-RVRLGMSARLTIVT 355


>gi|28210232|ref|NP_781176.1| membrane-associated protein [Clostridium tetani E88]
 gi|28202668|gb|AAO35113.1| conserved membrane-associated protein [Clostridium tetani E88]
          Length = 437

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 130/381 (34%), Gaps = 69/381 (18%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +    +++G +          +P   +IK   V+ G  + +   L+  +  +    ++  
Sbjct: 49  LNKVATATGNVEANHRNDIALNPSLKVIK-VNVKEGQMVKKDDVLVELDSKDLKTQLEKA 107

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++++KN                                  D L ++     +        
Sbjct: 108 ELNLKNAN--------------------------------DTLAQFQGAEVE-------- 127

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                  K T   S+   RL LEN  S    L     K L+  K LFE   VSQN+ +  
Sbjct: 128 -----NQKKTASGSLVQARLALENAKSTHEDL----SKKLSQNKKLFEGGYVSQNEYDAS 178

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            +   ++   ++      KN   +++ +    N +  +            +   A   S 
Sbjct: 179 VKAAKEAENGVKNAEAALKNAENNLSGIDISTNNKIIS-----------QRNQIAMIQSD 227

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           +  ++   E   I + ++G IV   +   + Y    +  M ++       + A +     
Sbjct: 228 IKSIKDKIEDCYIKANVSGKIVRMDA-KENQYPNSGE--MIVIDDVSKYRVNADINQYDA 284

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
            ++KKG    ++         K++K  IE++  I  ++          E  L I  +A  
Sbjct: 285 VNIKKGQKVNIKIKGID----KEYKGKIEEVGEIAEKKIAKSGAGADAEHKLNI-KVALD 339

Query: 400 DNNIELRNGFPAEVLFTAKNT 420
            ++ ++++G+ A++    +  
Sbjct: 340 KSDSKVKSGYEADLEIILQER 360


>gi|148548881|ref|YP_001268983.1| secretion protein HlyD family protein [Pseudomonas putida F1]
 gi|148512939|gb|ABQ79799.1| secretion protein HlyD family protein [Pseudomonas putida F1]
          Length = 381

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/354 (11%), Positives = 97/354 (27%), Gaps = 67/354 (18%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K +V +   +  G  L+  ++              ++ R  +D  ++ +       
Sbjct: 73  GYVAKVEVADDQPVKAGDVLVRLQN--------------RDYRARLDQARAGVTEAQAAL 118

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              + + +   E                                 R+       L  E  
Sbjct: 119 AAAQASQQIATE---------------------------------RIDQQQQAILQAEAV 145

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                A     + D+   + L   +A +   L        ++    +      +     +
Sbjct: 146 VRSATAEQHRSELDVQRYRGLVRDDAATMQRLETASAHASQAQAARQGAQAALRQQRAQL 205

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                 A  +  +   E            A    +L+  E+  +   I +PI G +   +
Sbjct: 206 ------AMAKARSAQAEAELQQRAAALARALAHQQLS--EQDEQDTVIRAPITGVVGQRR 257

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +   Y    QPL+ +VP  +   + A     Q+  ++ G    +    +A        
Sbjct: 258 VRT-GQYVVPGQPLLAVVPLQQAYVV-ANYKETQLARMRPGQPVEIHVDSFASQ---PLH 312

Query: 365 AIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRNGFPA 411
             +    P      +   ++  T  + +++ +       D  +   ++  G   
Sbjct: 313 GHVASFSPASGNVFALLPSDNATGNFTKIVQRFPVRILLDKPLDGPQVLPGMSV 366


>gi|116625734|ref|YP_827890.1| multidrug resistance efflux pump-like protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116228896|gb|ABJ87605.1| Multidrug resistance efflux pump-like protein [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 441

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 87/269 (32%), Gaps = 18/269 (6%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQ 218
           V R  ++     + I  +  D+E      R  +   Q  L       ++   V +  L++
Sbjct: 116 VKRGQRIAEIDAQDIKDHLDDVEAGIVQSRLDIKRRQAQLLAQMENLKQGLRVLKATLDK 175

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            ++      +    +    +  +      YDEA  +     +    DL+  Q ++  ++ 
Sbjct: 176 AKQNARAIPVSNSISQENLRLAVEEYQAAYDEAVKQMPLTEERQLADLKLYQLSYEHDIR 235

Query: 279 KLTILEKTREQKTILSPIAGTIV--------YNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                     + TI +P+ G +V                +     QP M +V       +
Sbjct: 236 HRDRHMTDFRRCTIEAPMDGMVVMQTTYRGGEMNQIKVGDRLSPGQPFMAVV-DPNSMQL 294

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A ++  + + V+ G  ATVRF  + DI     K  ++ +           +   YY   
Sbjct: 295 DAMMSQAESELVRLGQPATVRFDAFPDI---VVKGRVKAVGAFAM----GGRRVNYYVRR 347

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + +  +   + +  +     A        
Sbjct: 348 IPV-RVELENPDERVIPDLSASADVLTGR 375


>gi|294101492|ref|YP_003553350.1| efflux transporter, RND family, MFP subunit [Aminobacterium
           colombiense DSM 12261]
 gi|293616472|gb|ADE56626.1| efflux transporter, RND family, MFP subunit [Aminobacterium
           colombiense DSM 12261]
          Length = 401

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 81/222 (36%), Gaps = 19/222 (8%)

Query: 205 LFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQ-KNMLRHINELYDEANLEFANYLKEI 262
           L + N   ++ D+   +  + K+   ++     + +    +  +L  E+ L+ A    + 
Sbjct: 91  LLQANLETAKADVLSAQADLAKAEATVKNTRKNRDRKKELYSRDLIAESELDAAQTEYDT 150

Query: 263 SRDLEQNQR-TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PL 318
           +    +  + + A   + L   E +     I SPI G ++  ++         SQ    L
Sbjct: 151 ALAQLKAAKASLAQSQANLRHKEVSLGYTRITSPINGVVID-RTVEVGQTVNASQSAPTL 209

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             I        + A +    I  ++ G         Y ++    F   IE+I  +    +
Sbjct: 210 FTIAEDLTKMKVEANIDEADIGQIEAGQRVEFTVDAYPEL---FFIGSIEEI-RLAPNAE 265

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            N+ T   Y VI+ +      + +++L  G  A V   AK  
Sbjct: 266 GNIVT---YTVIIMV-----QNPDLKLMPGMTANVSVIAKEK 299


>gi|213416941|ref|ZP_03350085.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 107

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 38/98 (38%), Gaps = 4/98 (4%)

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           +       +        + K + A I+ I P   +++     Q YY+VI+       +++
Sbjct: 1   IYVDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVIIAFD---VNED 57

Query: 402 NIE-LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           ++  L+ G   +        ++ + ++ P+     K F
Sbjct: 58  DLRWLKPGMTVDASVITGKHSIMEYLLSPLMKGVDKAF 95


>gi|156932788|ref|YP_001436704.1| hypothetical protein ESA_00584 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531042|gb|ABU75868.1| hypothetical protein ESA_00584 [Cronobacter sakazakii ATCC BAA-894]
          Length = 391

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 81/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     L   + + R + +N         + +  L+  Q DL     L   N + +
Sbjct: 99  QQAFEKAKTELASSVRQTRQLMINSKQYAANIEVKKTALAQAQSDLNRRVPLGSANLIGR 158

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 159 EELQHARDAVASAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 212

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   +S         + PLM IVP S   ++ A 
Sbjct: 213 ------------ALERTKIVSPMTGYVSR-RSVQVGAQISPTTPLMAIVPSSG-LWVDAN 258

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ H++ G  ATV    Y D    ++   +  +D          P  +   N ++ 
Sbjct: 259 FKETQLAHMRIGQPATVVSDIYGDDV--EYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 316

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++       + + +
Sbjct: 317 VQRLPVRIELDAKQLEQHPLRI 338



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 58/160 (36%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
              N V+I +  SG + K  VEN   + +G  L+T +  +     +  K  + +      
Sbjct: 58  VAGNQVQIMAQVSGSVTKVWVENTDFVKKGDVLVTLDPTDAQQAFEKAKTELASSVRQTR 117

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I++++ A +    K  + +   +      L           +     ++S    L +
Sbjct: 118 QLMINSKQYAANIEVKKTALAQAQSDLNRRVPLGSANLIGREELQHARDAVASAQAQLDV 177

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
            + +  +     L   LE++ ++ +A        L + + 
Sbjct: 178 AIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERT 217


>gi|91778009|ref|YP_553217.1| multidrug resistance protein MdtN [Burkholderia xenovorans LB400]
 gi|91690669|gb|ABE33867.1| Putative efflux pump, membrane fusion protein, unknown subfamily
           [Burkholderia xenovorans LB400]
          Length = 349

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/317 (12%), Positives = 92/317 (29%), Gaps = 80/317 (25%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I    V     + +G  L   + +  +       +++   +  +   ++ALD     
Sbjct: 58  GGRIVAIPVAENMHVAKGDLLFQIDPVPYS-------LTVAQTQADLSVAQAALD----- 105

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                   T  +V +   S+   S                   +
Sbjct: 106 ------------------------TQRRVLSTQRSTATVS------------------AD 123

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +    +A L+  ++ +  +  L  K  V     +Q +   + +T  L++   +Q   ++ 
Sbjct: 124 QVQRAKANLALAERTVERLGPLASKGYVPAQQFDQAQTAKHDATTSLQQAREQQTAAVQA 183

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I+                        + T     + L I +      T+ +P  G +V  
Sbjct: 184 IDTEAG-------------------AEATVRARQAALDIAQHALGDTTVRAPHGGRVVGL 224

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKK 362
              +       +Q L  +V +    ++ A      +  +  G         ++ I R + 
Sbjct: 225 SVLT-GEIVAPAQTLFTLV-NDDEWFVVANFRETDLHAIAVGDCV----TAFSMIDRARP 278

Query: 363 FKAIIEKIDPIISQQDN 379
            K  ++ I   +   D 
Sbjct: 279 IKGTVQGIGAGVLDTDR 295


>gi|17548661|ref|NP_522001.1| putative multidrug resistance transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17430909|emb|CAD17591.1| putative multidrug resistance homolog transmembrane protein
           [Ralstonia solanacearum GMI1000]
          Length = 363

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 104/340 (30%), Gaps = 30/340 (8%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                   +      ++       S +     + +V +         L     +     +
Sbjct: 28  RPESEASEQSTDDAYVQADSTVIVSQVAGTITRVEVADHQEVQAGAPLASIDERDLRIAA 87

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 I+S   ++     ++              +   A L   + +     NL    +
Sbjct: 88  DNAKAHIASAQATIDGLQAQIARQQSAIEQARAAVAATGANLKLAEANRNRFANLARDGS 147

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            +     Q +            ++    +  +    L                 DLE+ +
Sbjct: 148 GTVQAQQQADAQWDIQRAARERDLAGLHSAEQQTAIL---------------RADLEKAR 192

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++    E       +++P++G +V  +S     YA+  QPL+ +VP     Y+
Sbjct: 193 ASLLSAQAEKATAELNLSYARVIAPVSG-VVAQRSARVGGYARVGQPLLTLVPLD-AVYV 250

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEY 386
            A     Q+ HV+ G  AT+      ++R    K  +E + P      S    +  T  +
Sbjct: 251 EANFRETQLAHVRVGQPATITVDALPNVR---LKGRVESLGPASGVSFSTTPPHNATGNF 307

Query: 387 YEVI----LKITDLAFSDNNIELRNGFPA--EVLFTAKNT 420
            +++    ++I      ++   LR G      +   A+ T
Sbjct: 308 TKIVQRLPVRIRIEPGQEDARLLRVGMSVRPSIDVRAQET 347


>gi|115522218|ref|YP_779129.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           BisA53]
 gi|115516165|gb|ABJ04149.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           BisA53]
          Length = 385

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/381 (14%), Positives = 119/381 (31%), Gaps = 89/381 (23%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                V I    +G I   +V+ G  +  G  L   + +         ++++   R  ++
Sbjct: 72  VGAQKVLITPDVAGKIIDVEVKEGQLVKTGDVLFRIDPVPF-------QLAVAQARAKLE 124

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +++   L                       K +    ++ N GI    R ++ K + +
Sbjct: 125 DSRTSHANLVANV-------------------KLYGQTIELVNAGIQIKQRDVERKSSLV 165

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           RS   ++LDL+N +S L                     A +Q  L +Q+R          
Sbjct: 166 RSSAGSQLDLDNANSALVT-------------------AQAQLQLVKQQRSTA------- 199

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                       +N+L  +  L    +   +               + L   ++  +  T
Sbjct: 200 ------------LNQLLGDPELPLEQFPAYLQA------------KAALDDAQRNLDLST 235

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P+ GT     +     +     P+  ++  +   ++ A        +V  G    + 
Sbjct: 236 VRAPMDGTATQVDNIQLGRFVAAGNPVFSVI-DTTAPWVDANPKESDFTYVAVGQKVRID 294

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNN----I 403
              + D     F A +  + P    Q         T  + +V+ ++    + D N     
Sbjct: 295 IDAFPDH---VFTATVGSLSPGTGAQFAILPAQNATGNFVKVVQRVPVRLYFDVNDKAVR 351

Query: 404 ELRNGFPAEVLF-TAKNTTLA 423
            L+ G  A V   T    +LA
Sbjct: 352 RLKAGMSAVVSIDTTHTRSLA 372


>gi|241768208|ref|ZP_04765647.1| fis family transcriptional regulator [Acidovorax delafieldii 2AN]
 gi|241360354|gb|EER57549.1| fis family transcriptional regulator [Acidovorax delafieldii 2AN]
          Length = 188

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 52/161 (32%), Gaps = 14/161 (8%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLM 319
              D    + +  D  + L+       + +I SPI G ++       +  A   Q   L 
Sbjct: 1   AQADEASARASVDDARAALSTDVTNLSKASIRSPIDGVVLTRSVEPGNAVAASLQAVTLF 60

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +        +   V    +  VK    A+     Y   R     A + ++    ++ DN
Sbjct: 61  TLAEDLTRLRLDVNVDEADVGSVKVDQKASFTVSAYPSRRYP---AKVTRVSFGSTKTDN 117

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                    V+  IT L   + ++ LR G  A    T+   
Sbjct: 118 ---------VVTYITWLEVDNTDLSLRPGMTAAATITSTER 149


>gi|167719811|ref|ZP_02403047.1| putative multidrug resistance protein [Burkholderia pseudomallei
           DM98]
          Length = 397

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 89/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVKAAQASLDAAGQQLASNRALTANTTVADHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 LAAAAKVRDAYLNNARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSVKYHGKVIGFSAGTGAAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++      ++ + +      +V   
Sbjct: 317 RLPVRVELDPKELKEHPLRIGLSMQVDVDIK 347



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKSGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L   L   +  +   +  ++   +V  +      
Sbjct: 116 GLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASLDA 175

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 176 AGQQLASNRALTAN 189


>gi|225155196|ref|ZP_03723691.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
 gi|224804143|gb|EEG22371.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
          Length = 334

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 108/358 (30%), Gaps = 88/358 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +   + G  I     L   +D      +D  + S+                    
Sbjct: 57  SGRVAEVLHDEGDAITADEVLARLDDGPYRHEVDQARASLAA------------------ 98

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                     ++     +++ YR  ++   R        ++   
Sbjct: 99  --------------------------AESDAQRLAAGYRPEEIDQARASVEQAEVVNANA 132

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K +  RA            ++L  KN + Q               E  + +  +    + 
Sbjct: 133 KLNANRA------------RDLITKNVIPQE--------------EHDDRLAREAETDKQ 166

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +        L  A Y  E   D+ + +   A   + L   +   +  T+ +P +GT+V  
Sbjct: 167 LQAARANLALLAAGYRAE---DIAKARAQVAQARAVLATAQLNLDDTTLTAPSSGTLVT- 222

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++    +  Q    ++ +    +  ++RA V  + +  V  G    V F      + K +
Sbjct: 223 RALEPGSIVQPGVTVLTLS-LDRPVWVRAYVDERDLGLVAPGTEVDV-FT--DARQGKPY 278

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +  I  + P       + +  NL+T   Y + + + +         LR G P  V   
Sbjct: 279 RGKIGFVSPRAEFTPKTVETENLRTSLVYRLRIVVAEPDSL-----LRQGMPVTVRVK 331


>gi|86358955|ref|YP_470847.1| HlyD family protein secretion protein [Rhizobium etli CFN 42]
 gi|86283057|gb|ABC92120.1| probable protein secretion protein, HlyD family [Rhizobium etli CFN
           42]
          Length = 405

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 99/313 (31%), Gaps = 28/313 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +      L    +  E Q +       S  +  F   +      L  +  ++ +
Sbjct: 91  QADMVGVTTDVSGLVDRIDVHENQAVKAGQVLFSLKADSFKIALDGAKAQLGAQRNQIMN 150

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +  +      + +  +A L  +Q      + L    + +Q+  ++ +  +  +  ++   
Sbjct: 151 LKASYQQSLAEITQAQADLPYYQDQFDRQQALVNNGSATQSAYDEAKHNLEAAQQKVAVA 210

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             E    L  +    D+   E A YL+                 S +    +      + 
Sbjct: 211 KAEAATTLAQLGGSADQPVEENALYLQ---------------AKSNVDNARRELANSIVK 255

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +    +    +Y Q SQ    +V  +   +I A     ++ +VK G  AT+   
Sbjct: 256 APFDGIVTNVHALQVGSYLQASQQAFSLV-ATDHLWIAASPKETELTYVKPGQMATIYVD 314

Query: 354 HYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            Y  +    +   +E I P          +Q       +    + ++++    +     L
Sbjct: 315 TYPGVT---WSGKVESISPASGSSFSLLPAQNTTGNWVKVVQRIPMRVSIEDAAGKP-PL 370

Query: 406 RNGFPAEVLFTAK 418
           R G    V     
Sbjct: 371 RVGMSTVVDVETG 383



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 47/153 (30%), Gaps = 5/153 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID-----TEKSALD 118
           SG++ +  V     +  G  L + +       +D  K  +   R  I       ++S  +
Sbjct: 102 SGLVDRIDVHENQAVKAGQVLFSLKADSFKIALDGAKAQLGAQRNQIMNLKASYQQSLAE 161

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               + D+     +   +Q L   G    +      + + +  + + +      +     
Sbjct: 162 ITQAQADLPYYQDQFDRQQALVNNGSATQSAYDEAKHNLEAAQQKVAVAKAEAATTLAQL 221

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
               ++     AL    + ++   +     + V
Sbjct: 222 GGSADQPVEENALYLQAKSNVDNARRELANSIV 254


>gi|262407087|ref|ZP_06083636.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294648025|ref|ZP_06725572.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CC 2a]
 gi|262355790|gb|EEZ04881.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292636644|gb|EFF55115.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CC 2a]
          Length = 344

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 118/384 (30%), Gaps = 89/384 (23%)

Query: 48  GEILNEDNVVEIKSPFS------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           G I   DN    +          G IKK   +   Q+ +G  LL  ED E          
Sbjct: 34  GNIEYTDNAQVRQHITPINTRVPGFIKKICFDEYQQVHKGDTLLIIEDTEF--------- 84

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                   +   ++  D  N                                    +   
Sbjct: 85  -------RLRMAQAEADLAN----------------------------------ATAGRQ 103

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +     T   ++ ++   +E     +R  + + +++L   + L +++AV++   +    
Sbjct: 104 ATTIGIATTQNNLSVSDASIEE----VRVQMENARRELNRFEKLLQEDAVTKQQYD---- 155

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                      N+H      +   E    A L  +    E +  L QN+       + L 
Sbjct: 156 -----------NVHTAYEAAKARYEQVSRAKLSTSLVKSEQTHRLGQNEAGVRLAEAALE 204

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +         I++P  GT    +        Q  Q ++ IV  S   ++ A     Q+ +
Sbjct: 205 LARLNLSYTVIIAPCDGT-TGKKEILEGQLVQPGQTMVDIV-DSSDLWVIANYRETQLPN 262

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKID----PIISQQDNNLQTQEYYEVI----LKI 393
           +K+G    +      +I    FK ++E I        S    +  T  + +V     ++I
Sbjct: 263 IKEGAEVEITADAVPNIT---FKGVVESISDATGAAFSMIPQDNATGNFVKVEQRIPVRI 319

Query: 394 TDLAFSDNNI-ELRNGFPAEVLFT 416
           +       ++  +R GF  E    
Sbjct: 320 SLKGNKPEDLKRMRAGFNVECEVK 343


>gi|167738813|ref|ZP_02411587.1| putative multidrug resistance protein [Burkholderia pseudomallei
           14]
          Length = 385

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 89/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVKAAQASLDAAGQQLASNRALTANTTVADHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 LAAAAKVRDAYLNNARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSVKYHGKVIGFSAGTGAAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++      ++ + +      +V   
Sbjct: 317 RLPVRVELDPKELKEHPLRIGLSMQVDVDIK 347



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKSGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L   L   +  +   +  ++   +V  +      
Sbjct: 116 GLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASLDA 175

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 176 AGQQLASNRALTAN 189


>gi|238763829|ref|ZP_04624787.1| hypothetical protein ykris0001_33270 [Yersinia kristensenii ATCC
           33638]
 gi|238697959|gb|EEP90718.1| hypothetical protein ykris0001_33270 [Yersinia kristensenii ATCC
           33638]
          Length = 321

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 90/253 (35%), Gaps = 17/253 (6%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-LNQQERIVYKS 226
           L  ++    N    + +  LL+A     +      +    + A S  D   ++++ ++ S
Sbjct: 74  LNALKQAQANVQSAQAQLDLLKAGYREEEIAQVRAEVSQREAAFSYADSFLKRQQGLWTS 133

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEK 285
                  +   +            +  + A YL     +++ Q +   A   ++L   + 
Sbjct: 134 KAVSANELENARTARSQAQANLQASKDKLAQYLSGNRPQEIAQAEANLAQSEAELAQAQL 193

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             +  T+LSP  GT++  ++         S  +  +   +   ++RA V+ + +     G
Sbjct: 194 NLQDTTLLSPSGGTVLT-RAVEPGTILSASNTVFTLS-LTDPVWVRAYVSERHLGQAIPG 251

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSD 400
               + F        K +   I  + P       S +  +L+T   Y + + ITD     
Sbjct: 252 TEVEI-FT--DGRPGKPYHGKIGFVSPTAEFTPKSVETPDLRTDLVYRLRIIITDA---- 304

Query: 401 NNIELRNGFPAEV 413
            +  LR G P  +
Sbjct: 305 -DESLRQGMPVTI 316


>gi|237714034|ref|ZP_04544515.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|294809835|ref|ZP_06768515.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides xylanisolvens SD CC 1b]
 gi|229445858|gb|EEO51649.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|294442973|gb|EFG11760.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 346

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 60/384 (15%), Positives = 118/384 (30%), Gaps = 89/384 (23%)

Query: 48  GEILNEDNVVEIKSPFS------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           G I   DN    +          G IKK   +   Q+ +G  LL  ED E          
Sbjct: 36  GNIEYTDNAQVRQHITPINTRVPGFIKKICFDEYQQVHKGDTLLIIEDTEF--------- 86

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                   +   ++  D  N                                    +   
Sbjct: 87  -------RLRMAQAEADLAN----------------------------------ATAGRQ 105

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +     T   ++ ++   +E     +R  + + +++L   + L +++AV++   +    
Sbjct: 106 ATTIGIATTQNNLSVSDASIEE----VRVQMENARRELNRFEKLLQEDAVTKQQYD---- 157

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                      N+H      +   E    A L  +    E +  L QN+       + L 
Sbjct: 158 -----------NVHTAYEAAKARYEQVSRAKLSTSLVKSEQTHRLGQNEAGVRLAEAALE 206

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +         I++P  GT    +        Q  Q ++ IV  S   ++ A     Q+ +
Sbjct: 207 LARLNLSYTVIIAPCDGT-TGKKEILEGQLVQPGQTMVDIV-DSSDLWVIANYRETQLPN 264

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKID----PIISQQDNNLQTQEYYEVI----LKI 393
           +K+G    +      +I    FK ++E I        S    +  T  + +V     ++I
Sbjct: 265 IKEGAEVEITADAVPNIT---FKGVVESISDATGAAFSMIPQDNATGNFVKVEQRIPVRI 321

Query: 394 TDLAFSDNNI-ELRNGFPAEVLFT 416
           +       ++  +R GF  E    
Sbjct: 322 SLKGNKPEDLKRMRAGFNVECEVK 345


>gi|192288946|ref|YP_001989551.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192282695|gb|ACE99075.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 389

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 100/295 (33%), Gaps = 27/295 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +E Q +    +        F   ++     L    T   ++  N         L+ A ++
Sbjct: 94  KEGQRVQPGDELFQIDPVPFRLAVAQAQAKLADAKTSHANLVANVKLYGQTIDLVNAGIA 153

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q+D+    +L +  A SQ DL+     +  +  +L+    +Q      +N+L  +  L
Sbjct: 154 LKQRDVERKTSLVQSRAGSQLDLDNSTAALVTAQAQLQLVKQQQSTA---LNQLLGDPEL 210

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               +              +A   + L   E+     T+ +P++GT     +     +  
Sbjct: 211 PLEKF------------PAYAQAKAALDDAERNLRLSTVRAPMSGTATQVDNIQLGRFVA 258

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              P+  ++  +   ++ A        +V  G T T+    + D +   FK  +  + P 
Sbjct: 259 AGTPVFSVI-DTTQPWVDANPKESDFTYVAVGQTVTLDVDAFPDHQ---FKGRVSSLSPG 314

Query: 374 ISQQ----DNNLQTQEYYEVILKIT-DLAFSDNN---IELRNGFPAEVLFTAKNT 420
              Q         T  + +V+ ++   +A  + +     L+ G    V     + 
Sbjct: 315 TGAQFAVLPPQNATGNFVKVVQRVPLRIALDETDPMIKRLKAGMSVNVAIDTHHR 369


>gi|134292857|ref|YP_001116593.1| secretion protein HlyD family protein [Burkholderia vietnamiensis
           G4]
 gi|134136014|gb|ABO57128.1| secretion protein HlyD family protein [Burkholderia vietnamiensis
           G4]
          Length = 367

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/372 (12%), Positives = 102/372 (27%), Gaps = 75/372 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  +    +G + K  V +  ++  G  L+              ++  ++    + 
Sbjct: 65  VGGDVTVLAPKVNGFVDKILVTDNQRVKAGDVLV--------------QLDARDYDAKLA 110

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              + +D   +    LE                                         + 
Sbjct: 111 QASAEVDGARSAVAELE----------------------------------------AKQ 130

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +  Y              A L+    D    + L + +AVS   + + +    K+   + 
Sbjct: 131 QLQYAVIGQHAADRHASAAELARAASDRERYRELVKSDAVSNQIVERADADYSKADAAVA 190

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +        R ++ L                  L   +      ++   +     E  T
Sbjct: 191 RSDAALLAAQRQLDVL---------------GAQLADARARVNTALAAQRVAALNVEYTT 235

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +  N++      A    PL+ IVP +   +I A     Q++ ++ G    V 
Sbjct: 236 IRSPVDGYV-GNRTGRVGMLANVGAPLLTIVPATG-LWIDANFKEDQLRRMRAGERVDVA 293

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIE--LRN 407
               +     +  ++        S       T  + ++   + +         +E  LR 
Sbjct: 294 LDASSTRLHGRVDSLAPATGATFSVLPPENATGNFTKIVQRVPVRVHLDPQPGLERVLRP 353

Query: 408 GFPAEVLFTAKN 419
           G  A V      
Sbjct: 354 GLSAVVTVHLDR 365


>gi|259908975|ref|YP_002649331.1| Putative multidrug resistance protein K [Erwinia pyrifoliae Ep1/96]
 gi|224964597|emb|CAX56110.1| Putative multidrug resistance protein K [Erwinia pyrifoliae Ep1/96]
          Length = 380

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/417 (13%), Positives = 128/417 (30%), Gaps = 86/417 (20%)

Query: 7   KNLKRNHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           KN  R     L  + +++++ + + L+ W +   IE +  +      E + V I    SG
Sbjct: 33  KNRPRPGKKPLIILAIVAVVMLSVALVFWLMNRNIETTDDA----FTEADAVTIAPKASG 88

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I + +V++  ++ +G  L+  +  + +   D                            
Sbjct: 89  YITQLKVKDNQRVKKGDLLVVIDVRDASAQRDRA-------------------------- 122

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLDLEN 183
                    + +L   + + H   +++    +   +       +L R  + YLN  + + 
Sbjct: 123 ---------QAELGVAVAQLHQAQAQLALARVQYPAQKEQALAQLARAEANYLNAREDDK 173

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +   +    +S                         +R +  ++ +LR    E KN    
Sbjct: 174 RQRGVDPRATS-------------------------QRNIDAASAQLRSAKAELKNAQAQ 208

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +         + A  +++    +E  Q       ++L           + +P  G I   
Sbjct: 209 VA-----VASQVALQIRQQETSVEARQSQVDQGQAQLNTASLNLSYTEVRAPYDGFITKR 263

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                    Q    L  +V      +I A     Q+  +K G    +    + D++    
Sbjct: 264 NV-QVGTLVQAGSSLFSLVSPD--MWIVANFKESQLARMKPGNKVDISVDAWPDLK---L 317

Query: 364 KAIIEKI--------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           K  ++ +            S+       +    V +KI   +  D N  L  G   E
Sbjct: 318 KGHVDSVQMGSGSRFSAFPSENATGNYVKIVQRVPVKIVIDSGLDANHPLPIGLSVE 374


>gi|255658824|ref|ZP_05404233.1| efflux transporter, RND family, MFP subunit [Mitsuokella multacida
           DSM 20544]
 gi|260849223|gb|EEX69230.1| efflux transporter, RND family, MFP subunit [Mitsuokella multacida
           DSM 20544]
          Length = 360

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 75/226 (33%), Gaps = 18/226 (7%)

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            +LS + ++ + ++       ++  D+ QQ         + R  +   +  L   +ELY 
Sbjct: 71  QILSRNVQEGSRVRAGDTLMVINAKDVVQQSNAGDAQVAQARAQLDLAQRNLARYSELYQ 130

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +   A+ L +   + +    T+   ++             + +   G I   ++    
Sbjct: 131 E-DAVAASVLDQYQANYDAAFATYQQALATAAQGHNALGYTNLTAGADGVISEIKA-EEG 188

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                 Q +M +V  +    +   V   +I  V  G    V F   +     +    + +
Sbjct: 189 QVVAAGQTVMTLV-QTDELEVEIAVPENRIDDVAVGTPVKVSFWALSQ----EVNGTVRE 243

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + P+             Y+V + I +       ++L  G  A V  
Sbjct: 244 VAPMADSTSRT------YKVRVSIPNP---LEGMQL--GMTASVAV 278



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 43/155 (27%), Gaps = 4/155 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I    V+ GS++  G  L+     +     +     +   R  +D  +  L   +  
Sbjct: 69  GGQILSRNVQEGSRVRAGDTLMVINAKDVVQQSNAGDAQVAQARAQLDLAQRNLARYSEL 128

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y     A    ++   ++   + +    +                     +       E 
Sbjct: 129 YQEDAVAASVLDQYQANYDAAFATYQQALATAAQGHNALGYTNLTAGADGVISEIKAEEG 188

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +       + +    L     L  + AV +N ++ 
Sbjct: 189 QVVAAGQTVMT----LVQTDELEVEIAVPENRIDD 219


>gi|323692085|ref|ZP_08106332.1| hypothetical protein HMPREF9475_01195 [Clostridium symbiosum
           WAL-14673]
 gi|323503885|gb|EGB19700.1| hypothetical protein HMPREF9475_01195 [Clostridium symbiosum
           WAL-14673]
          Length = 562

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 55/414 (13%), Positives = 123/414 (29%), Gaps = 53/414 (12%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  ++SSSG I  + +   I S   G + +   E G ++  G  L   +       +   
Sbjct: 50  ITSTLSSSGTISPK-DTYSITSMSEGEVVQADFEEGDRVEAGQILYRIDASSMESKLSSA 108

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYD----------------VLEKAFESREEQLLDFLG 143
             S++  +   DT  S  +    KY                 +      +   Q+ D   
Sbjct: 109 SNSLERAQSSYDTAVSDYNEAVGKYSGNTYKATKSGYIKQLYIEAGDKVASNTQIADIYN 168

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                    F    ++        +  +              S +   L+  +    +  
Sbjct: 169 DQIMKIKVPFLNMEAAAIAPGSPAVLTLSDTLEQLNGTVLSVSSMDEALTGGRLVRYVTI 228

Query: 204 NLFEKN--------------AVSQND------LNQQERIVYKSTLELRENIHEQKNMLRH 243
            +                   VS  D      ++        S +E+   +  + + +  
Sbjct: 229 QVANPGGLTADMTATAAVGDFVSSGDGTFSATVDTVLAADLSSNVEVEALLVNEGDFVSV 288

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + ++          +K     ++  Q +     S L   + T +  TI +PI+GT++  
Sbjct: 289 GSPIFSMKASTAEKLIKTYKDSMDNAQASLEQAQSSLDSTQDTYDDYTITAPISGTVIK- 347

Query: 304 QSFSSSNYAQQS--QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
           +S+   +  Q       + ++        +  +    I +VK G T  V    + + +  
Sbjct: 348 KSYKVGDKVQNGSSASALAVIYDMSSVTFQMNIDELDISNVKTGQTVEVTADAFENEK-- 405

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            F   +  I      +  +     YY V + + ++        L  G   + + 
Sbjct: 406 -FSGKVTNISL----EGTSSNGVTYYPVTVTLDEVG------GLLPGMNVDGVI 448


>gi|299134790|ref|ZP_07027982.1| secretion protein HlyD family protein [Afipia sp. 1NLS2]
 gi|298590600|gb|EFI50803.1| secretion protein HlyD family protein [Afipia sp. 1NLS2]
          Length = 388

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/398 (13%), Positives = 116/398 (29%), Gaps = 86/398 (21%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
            LL I+ + GL  W  +   E +  +            + +   G + +  V +   +  
Sbjct: 63  GLLLIVLVAGLAYWLDIRDYESTDDA----FVAARSFSVAAKVGGYVTEVPVTDNQHVKA 118

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G  L               ++  ++ R  +D  K+ +       D ++            
Sbjct: 119 GDLLA--------------RIDDRDYRNAVDQAKAQVAVAQANIDNIK------------ 152

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                                        ++ S +      + +    +A L   Q++ +
Sbjct: 153 ----------------------------AQIASQHEQIDQAQAQVEQAKAQLEFAQQEES 184

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             K+L +K A              +   +   N+  Q+  +   +     A L      K
Sbjct: 185 RAKDLVQKGA-----------GTVQHEQQTHSNLQSQQANMTRSSAALSAAKLGV----K 229

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
            +   LE  + +     ++L       +   + +  AG +V     +  ++    Q LM 
Sbjct: 230 TLEAQLEGARASLQQAQAQLNQANLNLQYTRVTAAQAGRVVKLSG-AVGSFVTAGQSLMM 288

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ--- 377
            VP     +I A     Q+++++ G         Y D +       +  + P        
Sbjct: 289 FVP--DEVWIVANYKETQLKYMRPGQHVDFTIDAYPDRK---LTGHVASVQPGSGTAFSL 343

Query: 378 -DNNLQTQEYYEVILKITDLAFSD---NNIELRNGFPA 411
                 T  Y +V+ ++      D    +I +  G   
Sbjct: 344 LPAENATGNYVKVVQRVPVKIVVDHWPEDIPIGPGMSV 381


>gi|226311093|ref|YP_002770987.1| hypothetical protein BBR47_15060 [Brevibacillus brevis NBRC 100599]
 gi|226094041|dbj|BAH42483.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 531

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 113/365 (30%), Gaps = 65/365 (17%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I   QV  G  +  G  L T +D      +   + ++ + +  ++               
Sbjct: 93  ISTIQVGVGDAVKAGQVLATMDDSVARIQVTNAEANLLSAQARLE--------------- 137

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENK 184
                                   +     I+S+  ++            N       N 
Sbjct: 138 --------------------EAQKRKSPAEITSLQAAVNQTKNEWELAKQNIDGKKAAND 177

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQND-------LNQQERIVYKSTLELRENIHEQ 237
               +A L+S QK  T  + LF   A+++++       L+Q +R    + L  R+   + 
Sbjct: 178 VEKAKASLASAQKTYTSQQVLFAAGAIAKSEFDSAQASLDQAQRDYNTAMLTARQTTGQA 237

Query: 238 KNMLRHINELYDEAN--LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
              +      Y  A   L+ AN   + +  L   +       + L   +K     T+ +P
Sbjct: 238 GVKVEQALAAYQTAQEALQEANEGPDAATVLS-AKAAVEQAKAGLQQAQKAWRAVTLKAP 296

Query: 296 IAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           + G +V                  +M          + A+++   I  V++G   T    
Sbjct: 297 MDGVVVQVNGNVGE---IPGNDFIIMDNSNSGD-LEVVAQISQSDIGKVQEGLPVTFTTS 352

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            YAD     F+  ++ I P              Y+V+L +     ++ + +L+ G    V
Sbjct: 353 SYADET---FRGKVKLIYPEAKTDAGVTT----YDVLLSV-----ANQDNKLKIGMTMNV 400

Query: 414 LFTAK 418
                
Sbjct: 401 AIERG 405


>gi|972715|gb|AAB81308.1| accessory protein [Carnobacterium maltaromaticum]
          Length = 455

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/415 (13%), Positives = 140/415 (33%), Gaps = 39/415 (9%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
              E+ +    +I  E     +++P    I +  +     + +G  ++ F+ +   +   
Sbjct: 42  ARKEVVIRMPAKITAETISK-LQAPIETKITENYLYENKVVKKGEIVVVFDTLSLENEQK 100

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVL----------EKAFESREEQLLDFLGKYHS 147
             +  +  L       ++ +  + N  +            +      E++ + ++ +  +
Sbjct: 101 QFEDEVLVLEEQKKAAQTFIISVENNENQFVADDSFGYANQLNALFAEQESIQYITQQAT 160

Query: 148 TCSKVFNYGISSVYRSLKMKLT----------RMRSIYLNRLDLENKSSLLRALLSSHQK 197
             S++           L  +LT          +++  + N+ +++  S+ + +   + Q 
Sbjct: 161 DLSEINQEAYKKTEEQLDFQLTKRLNAQSEWEQVKKAWGNQQEVQEFSTEIISKYKTWQL 220

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR------HINELYDEA 251
            +       +KN V    L+  +  + +   E+ +   E+  ++        IN    + 
Sbjct: 221 QVNDATE-EQKNQVIAAILSTIDENIAELKKEIEQIQGEKAKLIAPTTSKNEINSGNAKV 279

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                  L +  +D+ +           +  L++  +Q  + +PI GTI  N+ F +   
Sbjct: 280 KQNKEQLLAKTKQDIIEFDDKQKKIEVSIKQLKEKIQQGMLKAPIDGTISLNEEFKTMID 339

Query: 312 AQQSQPLMKIVPH--SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
             +   + +I P   ++     A++   ++  +KKG            +  K     +  
Sbjct: 340 IPKGALIAEIYPTTGNREQMFTAQLPANEMTRIKKGMNVHFTLDK-KGVAAKIVDGKLTG 398

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           I       +N      +Y +  KI        N  +R G   E+       T  Q
Sbjct: 399 ISETSETTENGT----FYTITGKI----KIPKNFSIRYGLTGEISLIVGKKTYWQ 445


>gi|309789509|ref|ZP_07684092.1| secretion protein HlyD family protein [Oscillochloris trichoides
           DG6]
 gi|308228475|gb|EFO82120.1| secretion protein HlyD family protein [Oscillochloris trichoides
           DG6]
          Length = 524

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/341 (12%), Positives = 106/341 (31%), Gaps = 21/341 (6%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +       +   + +++  R  +   K+  + + N+     +  +    ++     +   
Sbjct: 176 DLAAAEAQLAQAQTNLQATRDRLSMAKTQAESVVNQAANNLRNAQDAYSRIYWENRELED 235

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               V    + +   + +       ++   ++ LE+     +  +++ +  +  M    E
Sbjct: 236 RGVDVPQAKLDAETAAQRAVENAQEALNQAQMALESAVQNEQTGVAAAESQVATMTATVE 295

Query: 208 K--NAVSQNDLNQQERIVYKSTLELRENIHEQKN----MLRHINELYDEANLEFANYLKE 261
           K  N   + D+   +  +  +   L + +  + N               A  +      +
Sbjct: 296 KLRNGPRKEDVAAAQTALTNAQRVLDQMLAMRSNPQQLQAAVDAAAAQLAAADAQVSQAQ 355

Query: 262 ISRDLEQN----------QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
              +L Q           Q   +   + L  +E    + T+ +P AG ++          
Sbjct: 356 ARVELAQAGARPEQVQAAQAQLSQAQANLRQIEVQLAKATLRAPRAGLVLTRPIH-EGEQ 414

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 LM I    +   +   +    I  V  G  A V    + D     F  ++  I 
Sbjct: 415 VLPGTVLMTIG-SLETVRLTLYIAEPDIGRVFPGQQAQVTVDSFPDR---VFTGVVTYIA 470

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                   N+QTQ+     +    +   + +  L+ G PA+
Sbjct: 471 QEAEFTPRNVQTQDERATTVFAVQVEIENPDHALKPGMPAD 511



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/246 (10%), Positives = 74/246 (30%), Gaps = 3/246 (1%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            ++S SG I  E+  V + S  +G ++   V+ G ++     L T +        D    
Sbjct: 35  SALSGSGTIEAEE--VLVSSEVAGRVQTLLVDEGDEVEPDQILATLDPALLQAQRDQAAA 92

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +     ++   ++     +        A                    +      + V 
Sbjct: 93  GVAVAEANLALLQAGSRPEDVAAAQAALAQAQALRDGAAAAHANALEALRNPQQLTTQVV 152

Query: 162 RSLKMKLTRMRSIYLNRLDLENK-SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           ++   + +  R++   +    ++  +   A L+  Q +L   ++           +  Q 
Sbjct: 153 QARATRDSAQRALEQVQAGSRSEDLAAAEAQLAQAQTNLQATRDRLSMAKTQAESVVNQA 212

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
               ++  +    I+ +   L        +A L+     +    + ++        +   
Sbjct: 213 ANNLRNAQDAYSRIYWENRELEDRGVDVPQAKLDAETAAQRAVENAQEALNQAQMALESA 272

Query: 281 TILEKT 286
              E+T
Sbjct: 273 VQNEQT 278


>gi|16264621|ref|NP_437413.1| hypothetical protein SM_b21207 [Sinorhizobium meliloti 1021]
 gi|307318625|ref|ZP_07598058.1| secretion protein HlyD family protein [Sinorhizobium meliloti AK83]
 gi|20455436|sp|Q92V44|Y5573_RHIME RecName: Full=UPF0194 membrane protein RB0873; Flags: Precursor
 gi|15140759|emb|CAC49273.1| putative protein secretion protein, HlyD family [Sinorhizobium
           meliloti 1021]
 gi|306895652|gb|EFN26405.1| secretion protein HlyD family protein [Sinorhizobium meliloti AK83]
          Length = 334

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 101/355 (28%), Gaps = 88/355 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I + +V+ G  +  G  +   +       +   +   +  R  +   ++        
Sbjct: 54  SGRIAELRVDEGDSVKAGDVIAKLDAEPFRQAVGAAEAEAEVTRATLAKLRAG------- 106

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                    +R  ++      +    +++ N  ++                         
Sbjct: 107 ---------ARAAEIAQARATHEERLAELENAKLA------------------------- 132

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                              K L     +SQ +L+Q       +    R            
Sbjct: 133 ---------------FERAKQLRPNGTISQAELDQANASRAAADARARSAREAL------ 171

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                    LE  N  ++I+    Q     A   S    LE       + +P  G I+  
Sbjct: 172 -------VLLEEGNRAEDIAAAAAQANAATAKADSARISLED----TQLAAPSDGVILS- 219

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +   +      +  ++ ++  ++  ++RA V    +  V  G   T+      D      
Sbjct: 220 RVRETGAIVSPAD-IVYVLSLTEPVWVRAYVAEPDLGRVHPGMKVTITSDTAPDRIY--- 275

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +  +  I P+      S +   L+T   Y + + I     ++   +LR G P  V
Sbjct: 276 EGTVGFISPVAEFTPKSVETPELRTDLVYRLRIVI-----ANPGKDLRQGMPVTV 325


>gi|126640832|ref|YP_001083816.1| RND efflux transporter [Acinetobacter baumannii ATCC 17978]
          Length = 333

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 29/284 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  + K   +RA     
Sbjct: 63  QVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVEQVRAQYELS 122

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              L   + L    A S+++         K+  +   N+   K    ++        L  
Sbjct: 123 LAQLRRYQQLGNSGAASKSE-------QDKAAADAENNLAALKQAEANV--------LVA 167

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              LK         +   +   ++L   + T++   I++P+ G  +   +     Y    
Sbjct: 168 KEALKTAQVAEAGLEAQVSSAKAQLDQAQTTKDYSVIVAPMDGQ-LGEVNPRVGQYVAAG 226

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P        A     QI +++ G  A         ++ KKF   +E+I P   
Sbjct: 227 SQLLYLIPQQTWVI--ANFKETQIANMRIGQKAWFTVDA---MKHKKFTGHVEQISPAAG 281

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPA 411
            +      +  T  + +V+    ++IT     +    LR G   
Sbjct: 282 SEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGMEHLRPGMSV 325



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 92/262 (35%), Gaps = 12/262 (4%)

Query: 20  MTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           M  + IIGI+ +I W+  + P   SV  +     +     + S  +G +K   V++   +
Sbjct: 1   MLGVLIIGIL-VILWAWRIGPFATSVQQTDNSYVKGKTTILSSQINGYVKDVLVKDFDHV 59

Query: 79  LQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            +G  L+  +         +    ++  K ++ N    I  +++ +     K + +   +
Sbjct: 60  KKGQVLMHIDATTYDQKVAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVEQVRAQY 119

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E    QL  +    +S  +       ++        L  ++    N L  +      +  
Sbjct: 120 ELSLAQLRRYQQLGNSGAASKSEQDKAAADAENN--LAALKQAEANVLVAKEALKTAQVA 177

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            +  +  ++  K   ++   ++ D +     +     E+   + +       +  L  + 
Sbjct: 178 EAGLEAQVSSAKAQLDQAQTTK-DYSVIVAPMDGQLGEVNPRVGQYVAAGSQLLYLIPQQ 236

Query: 252 NLEFANYLKEISRDLEQNQRTF 273
               AN+ +    ++   Q+ +
Sbjct: 237 TWVIANFKETQIANMRIGQKAW 258


>gi|224025473|ref|ZP_03643839.1| hypothetical protein BACCOPRO_02213 [Bacteroides coprophilus DSM
           18228]
 gi|224018709|gb|EEF76707.1| hypothetical protein BACCOPRO_02213 [Bacteroides coprophilus DSM
           18228]
          Length = 344

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/428 (13%), Positives = 123/428 (28%), Gaps = 101/428 (23%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF- 63
           M KN KR  P     + L      +G I+W             G +   DN    +    
Sbjct: 1   MIKNKKRAIPNFFIALIL------VGGISWVC-----GKFIHLGNVEYTDNAQVKQHLSP 49

Query: 64  -----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
                 G IKK   E    + +G  L+  E+ E    +   +                  
Sbjct: 50  INTRVQGFIKKIYFEEYQSVKKGDTLVVIENTEYLLKVAQAEAD---------------- 93

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                                             +   ++          T   +I++  
Sbjct: 94  ----------------------------------YQNALAGKSAMHTTINTTQNNIFVTE 119

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             +E +    R  L + + D    + L ++ AV+    ++ +     +     + + +++
Sbjct: 120 AAIEEQ----RIRLENAETDYKRYEGLMKEEAVTPQQFDRVQTEYAAAKARYEQLLRQKQ 175

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           +                    +E ++ LEQN+       + L + +       I +   G
Sbjct: 176 SSEL---------------VKQEQTQRLEQNESDIKLAEAALNLAKLHLSYTVICATADG 220

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   ++       Q  Q L+ +V      ++ A     Q   +K+G    ++     ++
Sbjct: 221 -VTGRKNIHEGELVQSGQTLVTLV-DGTEKWVIANYKETQTTDMKQGQLVEMKVDAIPNV 278

Query: 359 REKKFKAIIEKID-------PIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRNG 408
                +  I  I         +I Q ++     + ++   V ++ T      N   LR G
Sbjct: 279 VY---EGRIVSISDATGSFYSLIPQDNSAGNFVKVEQRIPVRIEFTGNNEQKNLNRLRAG 335

Query: 409 FPAEVLFT 416
              E    
Sbjct: 336 MNVECYVK 343


>gi|168483652|ref|ZP_02708604.1| transport protein ComB [Streptococcus pneumoniae CDC1873-00]
 gi|172042914|gb|EDT50960.1| transport protein ComB [Streptococcus pneumoniae CDC1873-00]
 gi|332205076|gb|EGJ19139.1| bacteriocin secretion accessory family protein [Streptococcus
           pneumoniae GA47368]
          Length = 449

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/438 (11%), Positives = 142/438 (32%), Gaps = 34/438 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R +     R+ +   + ++ L+ ++     EIS+S+   +     +  I+S  +  I   
Sbjct: 14  RRYHNFSSRVIVPMSLLLVFLLGFATFAEKEISLSTRATVEPSRILANIQSTSNNRILVN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            +E    + +G  L+ +++       +     +  L+      K  L++L       E  
Sbjct: 74  HLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGENH 129

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           F   ++       + + + +       S    ++  +            +L +++     
Sbjct: 130 FPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKIR 189

Query: 191 LLSSHQKDLTMMKNLFEKNAV--------SQND---------LNQQERIVYKSTLELREN 233
              + +  +    +L  +N          SQ +         + Q E  + +    L   
Sbjct: 190 DYQTAKSAIETGASLAGQNLAYSLYQSYKSQGEENPQIKVQAVAQVEAQISQLESSLATY 249

Query: 234 IHEQKN---MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +         + + L  +     + +L ++ ++L    +   +  S   +     ++ 
Sbjct: 250 RVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDKG 309

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYT 347
            I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G +
Sbjct: 310 KITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDVARIKVGDS 369

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
                  +    +    + I  ID   ++ +       ++++  +      S+   +LR 
Sbjct: 370 VRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLRY 422

Query: 408 GFPAEVLFTAKNTTLAQE 425
           G    +       +  + 
Sbjct: 423 GVEGRLQMITGKKSYLRY 440


>gi|291326283|ref|ZP_06123888.2| secretion protein, HlyD family [Providencia rettgeri DSM 1131]
 gi|291314978|gb|EFE55431.1| secretion protein, HlyD family [Providencia rettgeri DSM 1131]
          Length = 361

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 83/293 (28%), Gaps = 19/293 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F    ++L     +            +     ++    + +      ++  +   
Sbjct: 69  VKEGDFVKEGQELARMDTRALQEQLHEVQAQLRQAISAVTTAESALAQRKSEKVAAQAVV 128

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L + QK L   + L   NAVSQ  ++     +  S   L  +  +         
Sbjct: 129 RQREAELDAAQKRLNRSRALVRTNAVSQQQVDDDTAQMQGSRAALEASKAQVAAA----T 184

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              D A+         +       +R  AD            +   + +P  G I Y + 
Sbjct: 185 SAIDSASAGIVQAKNRVDAATATERRIIAD-----------LDDSILKAPRNGRIQY-RV 232

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +    V  G    +      +I       
Sbjct: 233 AEPGEVLGAGGRVLNMVDLSD-VYMTFFLPTEDAGKVALGSDVHIILDAAPNIVIPAKTT 291

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +  +     +  +  N + +  + V  +I+      +   ++ G P +    
Sbjct: 292 FVASVAQFTPKTVETQNERLKLMFRVRARISPELLEQHLEYVKTGLPGKAYVR 344



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 72/207 (34%), Gaps = 18/207 (8%)

Query: 20  MTLLSIIGIIGLITW--------SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + L+ II   G   W        +          S+G I   +  ++I +  +G I+   
Sbjct: 17  IILILIIVAGGFYYWNVNSGGLPAGFAQ------SNGRIEATE--IDIATKTAGRIETIN 68

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +G  L   +     + +   +  ++     + T +SAL    ++    +   
Sbjct: 69  VKEGDFVKEGQELARMDTRALQEQLHEVQAQLRQAISAVTTAESALAQRKSEKVAAQAVV 128

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             RE +L     + + + + V    +S   + +     +M+         + + +   + 
Sbjct: 129 RQREAELDAAQKRLNRSRALVRTNAVSQ--QQVDDDTAQMQGSRAALEASKAQVAAATSA 186

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           + S    +   KN  +    ++  +  
Sbjct: 187 IDSASAGIVQAKNRVDAATATERRIIA 213


>gi|83593128|ref|YP_426880.1| hypothetical protein Rru_A1793 [Rhodospirillum rubrum ATCC 11170]
 gi|83576042|gb|ABC22593.1| Secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
          Length = 347

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/354 (14%), Positives = 96/354 (27%), Gaps = 88/354 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I +  V+ G  + +GT L   +                                   
Sbjct: 57  SGRIDQAMVDEGDFVTEGTVLARLD--------------------------------VAP 84

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           YD   +A E+   +    L K  +           +VY      LT  R           
Sbjct: 85  YDDAVRAAEAGVGERQASLDKRVAGPRPAEIAQAKAVYAEHLANLTYARQ---------- 134

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                         D      L    AVS++  +  +               ++   L  
Sbjct: 135 --------------DFDKADKLLPSGAVSRSLFDHAQ--------------AQRGVALAR 166

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++   +   L       E   D+   + +     + L+     R    + +P  G I+  
Sbjct: 167 VDAAREALRLLEEGTRAE---DIAAARASLLAAQADLSSARTARRDTELKAPADGVILS- 222

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +             ++ ++      ++RA V+   +  V  G    V          K +
Sbjct: 223 RVREPGAIVASGD-IVYVMSLKAPVWVRAYVSESNLGRVYPGLPVEV-LT--DGAPHKPY 278

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           +  +  I P+      + +  +L+T   Y + + I           LR G P  
Sbjct: 279 RGTVGFISPVAEFTPKTVETPDLRTDLVYRLRVVIAQADDG-----LRQGMPVT 327


>gi|113476009|ref|YP_722070.1| RND family efflux transporter MFP subunit [Trichodesmium erythraeum
           IMS101]
 gi|110167057|gb|ABG51597.1| efflux transporter, RND family, MFP subunit [Trichodesmium
           erythraeum IMS101]
          Length = 609

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/467 (12%), Positives = 140/467 (29%), Gaps = 104/467 (22%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  +E +++++G ++  D +  +       I++  VE G  + QG  +   +D      I
Sbjct: 77  LARVERTLNATGSVVAFDLLPVLPQVSGLQIQQVLVEEGETVTQGQVMAILDDSVLKSKI 136

Query: 97  DLKKVSIKNLRCHIDTEK--------------SALDFLNNKYDVLEKAFESREE---QLL 139
           +  K  + + R  ++  +              +A +    + D ++      +    + +
Sbjct: 137 NQAKSQVASARSQVEQRRAVHSKTKVGVEQAIAAWEQARAERDGVKATITQAQAGKDEAI 196

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-------LENKSSLLRALL 192
             L +  ++    F   +     S       +R    +R D        E + S  +A  
Sbjct: 197 AALKQAQASRDDAF-AALKQTQASRDDAFAALRQTQASRDDTLAFVAQTEARLSEAQANE 255

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQ--------------------------------- 219
               +D    + L  +  +S  +L  +                                 
Sbjct: 256 EQTLRDFERYQTLRGEGVISSQELETRSTATKTAREGVRVAKANINSAQAKVDIAEANID 315

Query: 220 ----------------ERIVYKSTLELRENIHEQKNMLRHINELYDE----------ANL 253
                           +  V  +   +R      ++    ++    +          A  
Sbjct: 316 SAQAKVDIAEANIDSAQAKVDIAGSNVRSAEARVESAQASLSSTIAQLRSAEAKVNSAKA 375

Query: 254 EFANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
             ++   E++  L        + + + ++L   +    Q  + +P  G I+  +     +
Sbjct: 376 NISSAQAEVNSALSNINSAMSSVSSDEARLEEKQTQLSQTLVKAPANG-ILAERIARVGD 434

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
            +  S+ L  I+       ++ +V   Q+  VK G    +           K   I+ +I
Sbjct: 435 VSSSSKKLFSII-KDNQLELQLEVPETQLPQVKIGTKVNISSDA-DSRI--KISGIVRQI 490

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            P++++Q           V + + +         LR G       T 
Sbjct: 491 APLVNEQTREAT------VKIDLPNSDL------LRPGMFLRAKITT 525


>gi|325121104|gb|ADY80627.1| putative secretion protein [Acinetobacter calcoaceticus PHEA-2]
          Length = 372

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 92/284 (32%), Gaps = 29/284 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  + K   ++A     
Sbjct: 102 QVLMHIDATTYDQKVTQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVDQVKAQYELS 161

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              L   + L    A S+++         K+  +   N+   K    ++        L  
Sbjct: 162 LAQLRRYQQLGNSGAASKSE-------QDKAAADAENNLAALKQAEANV--------LVA 206

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              LK         +   +   ++L   + T++   I++P+ G  +   +     Y    
Sbjct: 207 KEALKTAQVAEAGLEAQVSSAKAQLDQAQTTKDYSVIVAPMDGQ-LGEVNPRVGQYVAAG 265

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P        A     QI +++ G  A         ++ KKF   +E+I P   
Sbjct: 266 SQLLYLIPQQTWVI--ANFKETQIANMRIGQKAWFTVDA---MKHKKFTGHVEQISPAAG 320

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPA 411
            +      +  T  + +V+    ++IT     +    LR G   
Sbjct: 321 SEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGIEHLRPGMSV 364



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 94/270 (34%), Gaps = 13/270 (4%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P     +  + ++ I+G++   W+  + P   SV  +     +     + S  +G +K  
Sbjct: 31  PTKRSTLLWMLVVLIVGILVILWAWRIGPFATSVQQTDNSYVKGKTTILSSQINGYVKDV 90

Query: 71  QVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            V++   + +G  L+  +         +    ++  K ++ N    I  +++ +     K
Sbjct: 91  VVKDFDHVKKGQVLMHIDATTYDQKVTQAASGVEQAKNTLANQTQSIAQKQADIVAAQAK 150

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D ++  +E    QL  +    +S  +       ++        L  ++    N L  + 
Sbjct: 151 VDQVKAQYELSLAQLRRYQQLGNSGAASKSEQDKAAADAE--NNLAALKQAEANVLVAKE 208

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   +  +  ++  K   ++   ++ D +     +     E+   + +       
Sbjct: 209 ALKTAQVAEAGLEAQVSSAKAQLDQAQTTK-DYSVIVAPMDGQLGEVNPRVGQYVAAGSQ 267

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  L  +     AN+ +    ++   Q+ +
Sbjct: 268 LLYLIPQQTWVIANFKETQIANMRIGQKAW 297


>gi|330952822|gb|EGH53082.1| secretion protein HlyD [Pseudomonas syringae Cit 7]
          Length = 385

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/423 (11%), Positives = 122/423 (28%), Gaps = 94/423 (22%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLIT----WS---ILLPIEISVSSSGEILNEDNVVEIKSP 62
            R+    +    +   + + G++     W       PIE + ++      +     I   
Sbjct: 29  PRSTRKRVVSSVIFGAVALAGVLVVLYAWQLPPFASPIESTENAQ----VKGQTTLIGPQ 84

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG + +  V++   +  G  L+  +D        + +  +      +  +K++L     
Sbjct: 85  LSGYVYEVPVQDFQFVKAGDLLVRLDD-------RIYRQRLDQAIAQLAVQKASLANNLQ 137

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +    E     R+ +L + + +   + +                                
Sbjct: 138 QRRSAEATIGQRQAELQNSIAQSRKSAA-------------------------------- 165

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                          DL   + L    +VS+++L      V ++          +   + 
Sbjct: 166 ---------------DLRRNQALVTDGSVSKSEL-----DVTRAADAQANAAVAEAKAVL 205

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I              L+ +  +    + + A+  + + +     +   I++P  G +  
Sbjct: 206 QIA----------REDLQTVIVNRGSLEASVANAQAAIELARIDLDNTRIVAPRDGQLGQ 255

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP  +     A +   Q+ +V+ G   +         +   
Sbjct: 256 IGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKETQMANVRLGQPVSFTVDALDGHQ--- 309

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVL 414
               +++I P    +      +  T  + ++  +I      D +      LR G    V 
Sbjct: 310 MHGHVQRISPAAGSEFSLLPADNATGNFVKISQRIPVRIVVDADQPMLEHLRPGMSVVVS 369

Query: 415 FTA 417
              
Sbjct: 370 IDT 372


>gi|330825944|ref|YP_004389247.1| RND family efflux transporter MFP subunit [Alicycliphilus
           denitrificans K601]
 gi|329311316|gb|AEB85731.1| efflux transporter, RND family, MFP subunit [Alicycliphilus
           denitrificans K601]
          Length = 533

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 117/359 (32%), Gaps = 32/359 (8%)

Query: 71  QVENGSQILQGT--PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK----SALDFLNNKY 124
             ++G  +  G     +T E +               L+     E+    +A        
Sbjct: 120 LFKDGKPVAPGQAQVAVTLERLGRPPEQFSFTPQQDYLKGSATVEEPHSFNAAIKAQAGT 179

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM----KLTRMRSIYLNRLD 180
              E  FE  E ++     +      ++ + G + +  SL++    KL + RS+++    
Sbjct: 180 QTYEFKFEQVEGRVQMTDEQLQRNGVELGDAGPARIRSSLQLLGEVKLNQDRSVFVTPR- 238

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L      +RA      +   ++  +  +    Q    + E +  +  L L    +E++  
Sbjct: 239 LAGIVESVRANAGDPVRRGQVLAVISSQALADQ----RSELLAAQKRLNLARTTYEREKK 294

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           L       ++  L      +E     E  ++  A   +  T   +   +  + +PI G I
Sbjct: 295 LWEDKISAEQDYLTARQLYQEAEIATESARQKLASLGAGATESTQGLTRYEVRAPIDGVI 354

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              +  S     ++   + ++       ++   V  K +  +K G  A V+        E
Sbjct: 355 TDKKI-SVGEVLKEDGTVFQLA-DLSTVWVELIVPAKDVGRIKVGDQARVKSAAL----E 408

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +  A +  +  +I +Q  N               L   +   + R G P  V  T+  
Sbjct: 409 GEASAKVSYVGALIGEQSRNA-----------TARLVLGNAKGQWRPGLPVSVDLTSDE 456


>gi|27381733|ref|NP_773262.1| multidrug resistance efflux pump [Bradyrhizobium japonicum USDA
           110]
 gi|27354902|dbj|BAC51887.1| multidrug resistance efflux pump [Bradyrhizobium japonicum USDA
           110]
          Length = 438

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 87/278 (31%), Gaps = 30/278 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 I++   ++     ++ ++       + +     A L     D    + L  K  
Sbjct: 162 DAAATRIATQQATIDRIGRQIAALESQVAQAKAQLVSAEAGLKRADLDYERQQALSSKGF 221

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+      E    +    ++         + +++    +     A   +          
Sbjct: 222 ASRATFESSEAGRDQGAAAVKAAQAAYDVAVSNVDVTKAQQAEAQAQLAE---------- 271

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  + L   E+      + +P+ GT   N+  S+ ++    Q L  +VP     YI
Sbjct: 272 -----LKTSLAKAERDLAFTAVRAPVNGT-FSNRLVSAGDFVAVGQRLGNVVPLDD-VYI 324

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP----IISQQDNNLQTQEY 386
            A     Q++ ++ G   T++   Y   +   F  +++ I      + +    +  T  +
Sbjct: 325 DANFKETQLKRIRPGQPVTIKVDAYGMRK---FSGVVDSIAAGAGSVFTLLPPDNATGNF 381

Query: 387 YEVILKIT-----DLAFSDNNIELRNGFPAEVLFTAKN 419
            +++ ++        + +  N+ LR G           
Sbjct: 382 TKIVQRVPVRIRVPKSVAKQNL-LRAGMSVYATVDTNK 418



 Score = 36.9 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 26/86 (30%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I      + + +  G  +   +D +    +D     I   +  ID     +  L ++ 
Sbjct: 130 GHISSILAGDNTTVRAGDVIFRIDDGDYKIAVDAAATRIATQQATIDRIGRQIAALESQV 189

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCS 150
              +    S E  L      Y    +
Sbjct: 190 AQAKAQLVSAEAGLKRADLDYERQQA 215


>gi|222081018|ref|YP_002540381.1| multidrug resistance efflux pump protein [Agrobacterium radiobacter
           K84]
 gi|221725697|gb|ACM28786.1| multidrug resistance efflux pump protein [Agrobacterium radiobacter
           K84]
          Length = 383

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/337 (12%), Positives = 97/337 (28%), Gaps = 28/337 (8%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           T    ++      +R  +    + +        V +       + L++     +      
Sbjct: 65  TAQASVQSTDNAYIRAELTRLSARVSGNLKSAPVQDFEHVKAGQLLMEIDPSDYEVKVAQ 124

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               + S    L+    + R  +        +           +++      L +  + +
Sbjct: 125 AKASLDSAVAQLQNLANQERLQHAAIDQANAQFQAASVTAELARQEAVRQTALLQSGSGT 184

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +                 +E    +K       +    + +     L  +S    Q Q +
Sbjct: 185 KQK---------------QEQADAEKQQTAAAAQASQASVVSARAQLDVVSGQRAQLQAS 229

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                S L   +       +++P  G +   Q     +Y   +  L+ +VP     Y+ A
Sbjct: 230 VDAAKSNLDAAQLNLSYTKVVAPFDGIVSERQVH-VGDYISVASNLLTVVPL-PNVYVTA 287

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE 388
                Q+  +  G    ++   +     + F+  +E + P    Q      +  T  + +
Sbjct: 288 NFKETQLARMSVGQRVIIKVDTFP---GQVFRGHVESLSPASGSQFALLPADNATGNFTK 344

Query: 389 VILKITDLAFSDNN----IELRNGFPAEVLFTAKNTT 421
           V  +I      D +     +LR G  + V     N T
Sbjct: 345 VTQRIPVRIAFDEDASVLEKLRPGMSSVVAVQVDNVT 381



 Score = 43.1 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 54/173 (31%), Gaps = 20/173 (11%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSA 116
           SG +K   V++   +  G  L+  +         +    +D     ++NL      + +A
Sbjct: 90  SGNLKSAPVQDFEHVKAGQLLMEIDPSDYEVKVAQAKASLDSAVAQLQNLANQERLQHAA 149

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK----------- 165
           +D  N ++       E   ++ +       S          +   +              
Sbjct: 150 IDQANAQFQAASVTAELARQEAVRQTALLQSGSGTKQKQEQADAEKQQTAAAAQASQASV 209

Query: 166 -MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDL 216
                ++  +   R  L+      ++ L + Q +L+  K +      VS+  +
Sbjct: 210 VSARAQLDVVSGQRAQLQASVDAAKSNLDAAQLNLSYTKVVAPFDGIVSERQV 262


>gi|212712924|ref|ZP_03321052.1| hypothetical protein PROVALCAL_04022 [Providencia alcalifaciens DSM
           30120]
 gi|212684402|gb|EEB43930.1| hypothetical protein PROVALCAL_04022 [Providencia alcalifaciens DSM
           30120]
          Length = 393

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 85/281 (30%), Gaps = 34/281 (12%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +     +      L   + + +   +N    +    + R+ LS  Q DL   + L   N
Sbjct: 95  PRDAELALEKAKTELANSVRQSQQHIINSRQFQANIDVKRSELSRLQNDLKRREVLGNSN 154

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + + +L      V  +   L   I +       +     E          ++       
Sbjct: 155 LIGKEELQHAREAVVSAKSALDVAIEQYNANQAIVLNTALEKQPLVEQAATQVRNAWL-- 212

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                             ++  I+SP+ G +   +S    +    + PLM IVP S   +
Sbjct: 213 ----------------ALQRTKIVSPVDGYVSR-RSVQVGSQITPNTPLMAIVPSSG-MW 254

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDN 379
           I A     Q+  ++ G  A V    Y       F   +  +D          P  +   N
Sbjct: 255 IDANFKETQLSSMRIGQPAKVTTDFYGKNV--VFNGTVVGLDMGTGSAFSLLPAQNASGN 312

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            ++  +   V + + +    +  + +  G   EV     N 
Sbjct: 313 WIKVVQRLPVRIALDEAQLDEYPLRI--GLSTEVEVDTANK 351


>gi|15600352|ref|NP_253846.1| multidrug resistance protein [Pseudomonas aeruginosa PAO1]
 gi|9951460|gb|AAG08544.1|AE004928_10 multidrug resistance protein [Pseudomonas aeruginosa PAO1]
          Length = 394

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 86/269 (31%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + ++R ++ N      + +  +  L+  + D    KNL +  A+SQ +
Sbjct: 95  ALQRAEANLAHTVRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQEE 154

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   L  +    +  L     L D+  +     +K  +  L Q     A 
Sbjct: 155 LAHARDALDSAKASLTSS----EQQLNTNRALVDDTQITSHPDVKAAAAQLRQAYLDDA- 209

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        + TI++P+ G +   +S       Q    LM +VP     +I A   
Sbjct: 210 -------------RSTIVAPVTGYVAK-RSVQVGQRVQPGNALMAVVPLD-QIWIDANFK 254

Query: 336 PKQIQHVKKGYTATVRFPHY--ADIREKKFKAI-IEKIDPIISQQDNNLQTQ-----EYY 387
             Q++H++ G    +R   Y           ++ +            N         +  
Sbjct: 255 ETQLKHMRIGQPVEIRSDLYGSDVRYSGTVDSLGVGTGSAFSLLPAQNATGNWIKIVQRV 314

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + I       + + +      +V   
Sbjct: 315 PVRIHIDPQELQKHPLRIGLSMDVKVDLH 343



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            NVV+I     G +     ++G  + +G  L+ F+  +         ++++    ++   
Sbjct: 54  GNVVQITPQIVGTVVSIGADDGDLVRKGQELVRFDPSDAD-------IALQRAEANLAHT 106

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              +  L +  D       +R+  L      Y    +   +  IS     L      + S
Sbjct: 107 VRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQ--EELAHARDALDS 164

Query: 174 IYLNRLDLENKSSLLRALLSSHQ 196
              +    E + +  RAL+   Q
Sbjct: 165 AKASLTSSEQQLNTNRALVDDTQ 187


>gi|89893673|ref|YP_517160.1| hypothetical protein DSY0927 [Desulfitobacterium hafniense Y51]
 gi|219668054|ref|YP_002458489.1| secretion protein HlyD [Desulfitobacterium hafniense DCB-2]
 gi|89333121|dbj|BAE82716.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219538314|gb|ACL20053.1| secretion protein HlyD family protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 517

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 11/164 (6%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            S +L + +    D + K  +L +      I SPI GT++ N S         +  L  I
Sbjct: 71  ASGELLEWKVKEGDLVEKNQVLGRQAVLPYITSPIQGTVIKNNSI-QGQAVTPASQLAVI 129

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQ 377
              +   YI   +    I  +K G    V+   Y  +        +++ID       S  
Sbjct: 130 A-DTDHLYIGVNIEETDIARIKVGQRVDVKLDAYPGVTFP---GRVQEIDRATQTYFSGA 185

Query: 378 DNNLQTQEYYEVI--LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +   +  Y +V   + +  +  + +N+ L  G  A V    K 
Sbjct: 186 SSFSTSGTYAKVTQLIPVKVVIDNQDNLPLTFGMNATVKIHIKE 229



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 77/223 (34%), Gaps = 33/223 (14%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ--KDLTMMKNLFEKNAVSQNDL 216
            V ++         S   N+   ++++++  A ++ ++   +   +K L++  AVS+ +L
Sbjct: 300 QVKQATANYNAAAASYNHNKASYDSQTAVTPAQIAYNEAMDNYIRIKALYDGGAVSEVEL 359

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           N  +  V  +  +L+   +  K  +         A                         
Sbjct: 360 NNAQDKVEITHAQLQTAQNSAKGAVDAAAAQMASAQAG---------------------- 397

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
              L I +K  +   + +P+AG +   ++      A      M ++ +++   +   VT 
Sbjct: 398 ---LDIAQKKLDDCIVRAPMAGEV-AAKTIEVGMMASPQAAAMTLI-NTQQVKVHINVTE 452

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
             I  +K G TA V+        +      +  I P    +  
Sbjct: 453 TNIAKIKVGSTAEVKVQAINAAAQ----GKVVNIAPASDAKTG 491



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 39/137 (28%), Gaps = 1/137 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K  V  G ++ +G  L   +  +    +     +        +  K++ D      
Sbjct: 270 GKVSKINVSIGQRVEKGDVLFQLDSTDLELQVKQATANYNAAAASYNHNKASYDSQTAVT 329

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                  E+ +  +           S+V  N     V  +     T   S          
Sbjct: 330 PAQIAYNEAMDNYIRIKALYDGGAVSEVELNNAQDKVEITHAQLQTAQNSAKGAVDAAAA 389

Query: 184 KSSLLRALLSSHQKDLT 200
           + +  +A L   QK L 
Sbjct: 390 QMASAQAGLDIAQKKLD 406


>gi|259418197|ref|ZP_05742115.1| secretion protein HlyD family protein [Silicibacter sp. TrichCH4B]
 gi|259345592|gb|EEW57436.1| secretion protein HlyD family protein [Silicibacter sp. TrichCH4B]
          Length = 353

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 75/238 (31%), Gaps = 31/238 (13%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +KDL    NL     V    L            E+   +  +             A  + 
Sbjct: 133 EKDLHRTNNLISDGWVPAERL------------EVVTAVAIKARAGHESASAGLRAQEQK 180

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L   S  L+      A   ++L + E +  + TI +   G I    +     YA+  
Sbjct: 181 LRVLDAQSSALDAAIEQAA---AQLQLAEISLSETTIRATERGFIGNLHA-EPGQYARPG 236

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            PL+ +V +     + A     Q+  ++ G T ++R   + D+        +E I P   
Sbjct: 237 APLLSVVSNDHKWVV-ANFKETQLGRIEPGQTVSIRVDSFQDL---ALTGRVESIAPASG 292

Query: 376 QQ----DNNLQTQEYYEVILKITDLAFSDNNIEL----RNGFPAEVLFTAKNTTLAQE 425
            +      +  T  +  V+ +I      D    L    R G  A V      TT    
Sbjct: 293 AEFSLLPPDNATGNFIRVVQRIPVKIELDQQHPLFHKLRPGMSAAVSI---ETTRLPY 347


>gi|327537543|gb|EGF24262.1| Secretion protein HlyD [Rhodopirellula baltica WH47]
          Length = 491

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/321 (15%), Positives = 104/321 (32%), Gaps = 35/321 (10%)

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           P  G+++   V+ G  + +G P+              +  SI   R  I +EK+ L+ L 
Sbjct: 102 PTDGVLESILVKTGDSVDRGQPVAVL-----------RSPSIGTARNQILSEKANLE-LA 149

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +    E    +    L   +        +  +    S+      +         ++ +L
Sbjct: 150 QEAYRWEADIHAGVSDLAKRIR-----AGEAIDAIKQSLQDKTIGEFGGQLLTMYSKSNL 204

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            N+ S               + +L    A+S   + +++    +S   L   I +     
Sbjct: 205 ANRLS-------------RSVDDLGGSGAISGRVVQERQSDRQQSEAMLEAAIEQSLFQT 251

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL--EKTREQKTILSPIAGT 299
           R      +    E    L+   + L     T AD M  L +   E    + TI SP+AGT
Sbjct: 252 RQSMIQAEAKRNEAERRLRIAKQTLGTLLGTLADSMGGLDVSPNELDVSRLTIQSPLAGT 311

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I      +S      +Q  + ++  +   ++ A +  +  + +  G    V       + 
Sbjct: 312 IESKAFSASERV--AAQDELFVIADTSSLWVEADIRGRDWESIHVGQGDEVMVST-PAMN 368

Query: 360 EKKFKAIIEKIDPIISQQDNN 380
                A++  +   +      
Sbjct: 369 MPPHPAMVYTVGRQVDPASGA 389


>gi|302392600|ref|YP_003828420.1| efflux transporter, RND family, MFP subunit [Acetohalobium
           arabaticum DSM 5501]
 gi|302204677|gb|ADL13355.1| efflux transporter, RND family, MFP subunit [Acetohalobium
           arabaticum DSM 5501]
          Length = 380

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 104/295 (35%), Gaps = 24/295 (8%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSS 186
           E+A    E +  + + +  S  SK+      +    LK++L     +   R ++L  + S
Sbjct: 28  EQAVADSEPKKQESVQQEDSKDSKLVVQVAEATRDDLKVELDFTGELAAYREVNLVPEIS 87

Query: 187 LLRALLSSHQKDLTMMKNLFEK--NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +   +   + D      L  K   A+ Q ++ + E  +  +    +  +   +   + I
Sbjct: 88  GVVREIKFEENDQVNKGQLLLKLDQAMEQAEVEKVEGNLEVA----KSRLDNARKKFKRI 143

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             LY++  +  + Y        E  +       + L   E    + TI SPI G I   +
Sbjct: 144 KSLYEKNVISKSEYDS-TKSKYEVARAQLKQAKASLNSAETQLNKTTIESPIKGVIAQKR 202

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                  A    P+ KIV   +       ++   +  V+ G + TV    Y +     F 
Sbjct: 203 V-ELGEMATTGNPVAKIV-QLRPLEFEGSISTTDLTKVEVGQSVTVEVDSYPERT---FT 257

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             + K+ P ++  +  L      +V ++      ++  + L+ G  A        
Sbjct: 258 GEVNKVAPTVNPSNRGL------KVTVQ-----LANEELLLKPGMFAAGRILVDE 301



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 58/157 (36%), Gaps = 4/157 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG++++ + E   Q+ +G  LL  +       ++  + +++  +  +D  +     + + 
Sbjct: 87  SGVVREIKFEENDQVNKGQLLLKLDQAMEQAEVEKVEGNLEVAKSRLDNARKKFKRIKSL 146

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y+         + +      KY    +++     S      ++  T + S     +  + 
Sbjct: 147 YE----KNVISKSEYDSTKSKYEVARAQLKQAKASLNSAETQLNKTTIESPIKGVIAQKR 202

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                 A   +    +  ++ L  + ++S  DL + E
Sbjct: 203 VELGEMATTGNPVAKIVQLRPLEFEGSISTTDLTKVE 239


>gi|299771396|ref|YP_003733422.1| HlyD family secretion family protein [Acinetobacter sp. DR1]
 gi|298701484|gb|ADI92049.1| HlyD family secretion family protein [Acinetobacter sp. DR1]
          Length = 375

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 91/284 (32%), Gaps = 29/284 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  + K    +A     
Sbjct: 105 QVLMHIDATTYDQKVTQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVDQAKAQYELS 164

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              L   + L    A S+++         K+  +   N+   K    ++        L  
Sbjct: 165 LAQLRRYQQLGNSGAASKSE-------QDKAAADAENNLAALKQAEANV--------LVA 209

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              LK         +   +   ++L   + T++   I++P+ G  +   +     Y    
Sbjct: 210 NEALKTAQVAEAGLEAQVSSAKAQLDQAQTTKDYSVIVAPMDGQ-LGEVNPRVGQYVAAG 268

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P        A     QI +++ G  A         ++ KKF   +E+I P   
Sbjct: 269 SQLLYLIPQQTWVI--ANFKETQIANMRIGQKAWFTVDA---MKHKKFTGHVEQISPAAG 323

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPA 411
            +      +  T  + +V+    ++IT     +    LR G   
Sbjct: 324 SEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGMEHLRPGMSV 367



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 91/270 (33%), Gaps = 13/270 (4%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P     +  +  + I+G++   W+  + P   SV  +     +     + S  +G +K  
Sbjct: 34  PTKRSTLLWMLGVLIVGILVILWAWRIGPFATSVQQTDNSYVKGKTTILSSQINGYVKDV 93

Query: 71  QVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            V++   + +G  L+  +         +    ++  K ++ N    I  +++ +     K
Sbjct: 94  VVKDFDHVKKGQVLMHIDATTYDQKVTQAASGVEQAKNTLANQTQSIAQKQADIVAAQAK 153

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D  +  +E    QL  +    +S  +       ++        L  ++    N L    
Sbjct: 154 VDQAKAQYELSLAQLRRYQQLGNSGAASKSEQDKAAADAE--NNLAALKQAEANVLVANE 211

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   +  +  ++  K   ++   ++ D +     +     E+   + +       
Sbjct: 212 ALKTAQVAEAGLEAQVSSAKAQLDQAQTTK-DYSVIVAPMDGQLGEVNPRVGQYVAAGSQ 270

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  L  +     AN+ +    ++   Q+ +
Sbjct: 271 LLYLIPQQTWVIANFKETQIANMRIGQKAW 300


>gi|332701559|ref|ZP_08421647.1| secretion protein HlyD family protein [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332551708|gb|EGJ48752.1| secretion protein HlyD family protein [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 350

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 87/293 (29%), Gaps = 35/293 (11%)

Query: 128 EKAFESREEQLLDFLGKYH-STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           E+  E R   LL  L K       ++    +      L    T  R   + +   + +  
Sbjct: 62  EEGDEVRAGDLLAVLNKRPLEDEVRLARAQVEVAEAELLKLETGTRPQEIAQA--QAQVE 119

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                L + ++     ++L +  AVS+   +       ++   L+      +       E
Sbjct: 120 ERETTLRNAERYFQRQRDLHDTGAVSKQAYDDAMARRNEAKARLQSAREGLRLAQEGFRE 179

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                             D+ Q +       ++L       +   + +P  G I+  +  
Sbjct: 180 -----------------EDVLQGRANLRAAKARLAEALTRLDDADLYAPSDGVILT-RVR 221

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      +   +   +  ++RA V   Q+  +  G    V   +        ++  
Sbjct: 222 EPGTVVAAGS-IAYTLSLHEPVWVRAYVPEPQLGRIYPGLPVQV---YTDTSPNTPYEGQ 277

Query: 367 IEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           +  + P       S +  +L+T   Y + + +           LR G P  V+
Sbjct: 278 VGFVSPQAEFTPKSVETTSLRTDLVYRIRVIVEKPDKG-----LRQGMPVTVV 325


>gi|189218911|ref|YP_001939552.1| membrane fusion component of tripartite multidrug resistance system
           [Methylacidiphilum infernorum V4]
 gi|189185769|gb|ACD82954.1| Membrane fusion component of tripartite multidrug resistance system
           [Methylacidiphilum infernorum V4]
          Length = 431

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/377 (12%), Positives = 108/377 (28%), Gaps = 91/377 (24%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N+V +KS  SG++ +   EN   + QG  L+                 +  L   + 
Sbjct: 80  VIGNLVPLKSQVSGVVTEVLYENTQLVHQGDVLVR----------------LDRLDSRVA 123

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E++  +                                             L   + R+
Sbjct: 124 LERAEAN---------------------------------------------LGETVRRV 138

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
             ++       N+     A L   + DL   K++    AVS+  ++  E+ V +   ++ 
Sbjct: 139 EDLFFQVQVNRNRLLAEIARLDRLKHDLARYKSVVSYGAVSEQLVDDTEQQVRELEAQVN 198

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           ++     +    I     E +        E                  L        ++ 
Sbjct: 199 QDQASLNDAESQIFNTKIEDHPLVKQAASE------------------LKNAYLDYVRRE 240

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P+ G I  N+     +  +    L+ +VP     ++ A    ++++ ++ G   T+ 
Sbjct: 241 VYAPVTGYI-ANRKVQPGDEVRPDTYLLSVVPLD-YLWVEANYREREMKKIRPGQPVTIT 298

Query: 352 FPHYADIR--EKKFKAIIEKIDPIISQQDNNLQTQEY------YEVILKITDLAFSDNNI 403
             +Y        + + +        +       T  Y        V ++++      +  
Sbjct: 299 VDYYGRRLIYHGQVEGLHPGTGSAFALLPPENATGNYIHIVERVPVRIRLSSEELKKH-- 356

Query: 404 ELRNGFPAEVLFTAKNT 420
            LR G     +      
Sbjct: 357 PLRPGLSVIAVTHVGKK 373


>gi|26988793|ref|NP_744218.1| multidrug efflux MFS membrane fusion protein, putative [Pseudomonas
           putida KT2440]
 gi|24983591|gb|AAN67682.1|AE016398_6 multidrug efflux MFS membrane fusion protein, putative [Pseudomonas
           putida KT2440]
          Length = 425

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/354 (11%), Positives = 99/354 (27%), Gaps = 67/354 (18%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K +V +   +  G  L+  ++              ++ R  +D  ++ +       
Sbjct: 117 GYVAKVEVADDQPVKAGDVLVRLQN--------------RDYRARLDQARAGVTEAQAAL 162

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              + + +   E                                 R+       L  E  
Sbjct: 163 AAAQASQQVATE---------------------------------RIDQQQQAILQAEAV 189

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                A     + D+   + L   +A +   L        ++   L+      +     +
Sbjct: 190 VRSATAEQRRSELDVQRYRGLVRDDAATVQRLETASAHASQAQAALQGAQAALRQQRSQL 249

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                 A             +L+Q     A   +   + E+  +   I +PI G +   +
Sbjct: 250 AMAKARAAQ--------AEAELQQRAAALARAQAHQQLAEQDEQDTVIRAPITGVVGQRR 301

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +   Y    QPL+ +VP  +   + A     Q+  ++ G    +R   +A        
Sbjct: 302 VRT-GQYVVPGQPLLAVVPLQQAYVV-ANYKETQLARMRPGQPVEIRVDSFASQ---PLH 356

Query: 365 AIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRNGFPA 411
             +    P      +   ++  T  + +++ +       D  +   ++  G   
Sbjct: 357 GHVASFSPASGNVFALLPSDNATGNFTKIVQRFPVRILLDKPLDGPQVLPGMSV 410


>gi|307303524|ref|ZP_07583278.1| secretion protein HlyD family protein [Sinorhizobium meliloti
           BL225C]
 gi|306902915|gb|EFN33507.1| secretion protein HlyD family protein [Sinorhizobium meliloti
           BL225C]
          Length = 334

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/355 (12%), Positives = 101/355 (28%), Gaps = 88/355 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I + +V+ G  +  G  +   +       +   +   +  R  +   ++        
Sbjct: 54  SGRIAELRVDEGDSVKAGDVIAKLDAEPFRQAVGAAEAEAEVTRATLAKLRAG------- 106

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                    +R  ++      +    +++ N  ++                         
Sbjct: 107 ---------ARAAEIAQARATHEERLAELENAKLA------------------------- 132

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                              K L     +SQ +L+Q       +    R            
Sbjct: 133 ---------------FERAKQLRPNGTISQAELDQANASRAAADARARSAREAL------ 171

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                    LE  N  ++I+    Q     A   S    LE       + +P  G I+  
Sbjct: 172 -------VLLEEGNRAEDIAAAAAQANAATAKADSARISLED----TQLAAPSDGVILS- 219

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +   +      +  ++ ++  ++  ++RA V    +  V  G   T+      D      
Sbjct: 220 RVRETGAIVSPAD-IVYVLSLTEPVWVRAYVAEPDLGRVHPGMKVTITSDTAPDRIY--- 275

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +  +  I P+      + +   L+T   Y + + I     ++   +LR G P  V
Sbjct: 276 EGTVGFISPVAEFTPKTVETPELRTDLVYRLRIVI-----ANPGKDLRQGMPVTV 325


>gi|91202210|emb|CAJ75270.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 336

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 104/281 (37%), Gaps = 17/281 (6%)

Query: 149 CSKVFNYGISSVYRSLKMKLTR---MRSIYLNRLDLENKSSLLRALLSSHQ-KDLTMMKN 204
             ++ + G +     +  +L      + + L R ++    ++   L + ++ +++   + 
Sbjct: 62  EERLVDEGETVSAGQIIARLESTELAQEVLLYRAEVNAARAVFEELETGYRTEEIEEWEA 121

Query: 205 LFEKNAVSQNDLN----QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           +  +  V  + L     +QER+  +  +   E    + +        Y E N     + K
Sbjct: 122 VVRRTRVDLDRLAADYKRQERLYAEKIISTSEFDAAKADYDAE-EARYREVNKRLVLFKK 180

Query: 261 EISRD-LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
              ++ +++ +       + L + +      TI S I+G ++         Y     P++
Sbjct: 181 GPRKEKIDKARADLQRTRAALRLAKTRLGYTTIKSSISGIVLSKNV-EPGEYVSPGTPVV 239

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I   +   ++RA +    +  +K G    +    Y +      +  +  I         
Sbjct: 240 IIGNLND-IWLRAYINETDLGRIKVGQKVHITTDTYPEKIY---EGHVSFIASEAEFTPK 295

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAE--VLFTAK 418
           N+QT+E    ++    +   +  +EL+ G PA+  +L   +
Sbjct: 296 NVQTKEERVKLVYRIKIVVYNPEMELKPGMPADGKILLKTE 336



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 25/195 (12%)

Query: 18  KRMTLLSIIGIIGLITW----SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           K + L+ +  +IG++ +    S +  ++  +  SG I   D  V +    SG +++  V+
Sbjct: 10  KIVLLMLLPIVIGIVIYLYAESWMGRVKDEIDVSGNIEVTD--VAVSFRISGWVEERLVD 67

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----------------- 116
            G  +  G  +   E  E    + L +  +   R   +  ++                  
Sbjct: 68  EGETVSAGQIIARLESTELAQEVLLYRAEVNAARAVFEELETGYRTEEIEEWEAVVRRTR 127

Query: 117 --LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
             LD L   Y   E+ +  +     +F        ++   Y   +    L  K  R   I
Sbjct: 128 VDLDRLAADYKRQERLYAEKIISTSEFDAAKADYDAEEARYREVNKRLVLFKKGPRKEKI 187

Query: 175 YLNRLDLENKSSLLR 189
              R DL+   + LR
Sbjct: 188 DKARADLQRTRAALR 202


>gi|29346659|ref|NP_810162.1| putative multidrug resistance protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|298387260|ref|ZP_06996813.1| multidrug resistance protein [Bacteroides sp. 1_1_14]
 gi|29338556|gb|AAO76356.1| putative multidrug resistance protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|298259929|gb|EFI02800.1| multidrug resistance protein [Bacteroides sp. 1_1_14]
          Length = 342

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 101/295 (34%), Gaps = 31/295 (10%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E  +  + + LL    + +    K     +   +    +  + + + + N    +   + 
Sbjct: 63  EHQYVRQGDTLLVLDNREYQIKVKEAEAALLDAHGLQDVLHSGIETSHTNIAVQDANIAE 122

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A L   ++D    + L ++ +V +    Q +     +    +  + +++  L    E 
Sbjct: 123 AKAKLWQLEQDYHRFERLLKEESVPEQQYEQTKAAYEAAEARYQALVAQKQAALSQYAET 182

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +     A  L++                + L + +       + +P  G +   ++  
Sbjct: 183 SKKTTGVQAGILRK---------------EADLDLAKLNLSYTVLTAPYDGYM-GRRTLE 226

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Y Q  Q +  +V  +K  +I A     QI ++  G    V+         K F   +
Sbjct: 227 PGQYVQTGQTISYLV-RNKDKWITANYKETQIANIYIGQQVRVKVDALP---GKIFNGEV 282

Query: 368 EKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             I           P  +   N ++ Q+   V +++ +++ S+   +LR G   E
Sbjct: 283 TAISEATGSKYSLVPTDNSAGNFVKVQQRIPVRIELENIS-SEEMAQLRAGMMVE 336



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 51/152 (33%), Gaps = 12/152 (7%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK  + +    + QG  LL  ++ E    +   + ++ +     D   S ++  +  
Sbjct: 53  SGYIKDIRFKEHQYVRQGDTLLVLDNREYQIKVKEAEAALLDAHGLQDVLHSGIETSHTN 112

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL------------KMKLTRM 171
             V +      + +L      YH     +    +                   +  + + 
Sbjct: 113 IAVQDANIAEAKAKLWQLEQDYHRFERLLKEESVPEQQYEQTKAAYEAAEARYQALVAQK 172

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           ++      +   K++ ++A +   + DL + K
Sbjct: 173 QAALSQYAETSKKTTGVQAGILRKEADLDLAK 204


>gi|299137329|ref|ZP_07030511.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX8]
 gi|298600734|gb|EFI56890.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX8]
          Length = 399

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 65/421 (15%), Positives = 130/421 (30%), Gaps = 51/421 (12%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +  +  H   L R  L+ ++    L     +  ++    +  +     N +EI    S
Sbjct: 1   MDQETQSTHRKRLGRWVLIGVVIAAVLTLLLTVYQVDRHPRTD-DANVWANYIEIAPEVS 59

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V++ + + +G  L   +       +         L   I  E   +   N+  
Sbjct: 60  GRLVQLPVKDNAFVKKGDLLFVIDPRPYEYALQQALADQDLLEQQIIDEARKIAAQNSSV 119

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D    A                     V   GI +   S+ +    +          E +
Sbjct: 120 DAATAAVH-------------------VSKTGIQTASSSIDLAKAAVTRAQAASAAAEAR 160

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  L     DL  ++ L +K  V+ + ++Q    V  +     E+          +
Sbjct: 161 -------LKYATNDLNRIQPLLQKQYVTVDQVDQANTAVRVAQGNYDESQAALAQSQAAL 213

Query: 245 NELYDEANLEFANYLKEISRDLEQN----------QRTFADEMSKLTILEKTREQKTILS 294
           N+   +   +  N   E    L Q                   S++       E+  +L+
Sbjct: 214 NQAVLQHE-QAGNTAVESQARLGQAIHTVDRVETLIAQRPARASRVDSARLDLERTRVLA 272

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P    +      S   YA+   PL  ++  S+  Y+ A     +++++  G    V    
Sbjct: 273 PFDAYVTSMNI-SEGAYARPGSPLFTLI-DSRNWYVIANYRESKLKNIHIGSPVDVYVMA 330

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           + D R   F+  +E I   I  +D              + ++  + N + L   FP  V 
Sbjct: 331 HPDHR---FEGHVESIGYGIFPEDGKQADG--------LPNIERTLNWVHLSARFPVRVH 379

Query: 415 F 415
            
Sbjct: 380 I 380


>gi|296157025|ref|ZP_06839862.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
 gi|295892911|gb|EFG72692.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
          Length = 375

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 92/296 (31%), Gaps = 29/296 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V +  F    + L+    + +          + S   ++     +         +   + 
Sbjct: 79  VQDNQFVHANQVLIRLDARDYDARLAQATAEVQSAQAAVIELQAKKSLQLATINEQAAEV 138

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L+    D T  + L +  AVS   + + +  + K+   +  +        R I 
Sbjct: 139 RASGAELTRSAADQTRYRELVKDEAVSNQVVERADADLTKAHAAVDRSNAALVAAQRQIA 198

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L                  +   +   A   +   +     E  TI SPI G +  N++
Sbjct: 199 VL---------------DAQIGDAEARIATAQAAQRVAALNVEYTTIRSPIDGYV-GNRT 242

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A     L+ +VP S   +I A     Q++ ++ G +  V          K+   
Sbjct: 243 ARVGLLANTGVSLLTVVPASG-LWIDANFKEDQLKKMRVGDSVDVDLDA----SSKRIHG 297

Query: 366 IIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           I+E + P          ++      T+    V +++      D    LR G  A V
Sbjct: 298 IVESLAPATGATFSVLPAENATGNFTKIVQRVPVRVRLDVPKDMQGVLRPGLSATV 353


>gi|150388124|ref|YP_001318173.1| RND family efflux transporter MFP subunit [Alkaliphilus
           metalliredigens QYMF]
 gi|149947986|gb|ABR46514.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
           metalliredigens QYMF]
          Length = 388

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 79/263 (30%), Gaps = 49/263 (18%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            V  +        +    +     N++    A L         M  L+E+ A+ +  L +
Sbjct: 101 GVNAARSQYQALQKQAESSINSGVNQAV---AHLEFVNTQYDRMLKLYEEGAIPKKTLEE 157

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E  +  +  + +E++         +++                               +
Sbjct: 158 VETQIVVAQNKYQESLDASPIAEAQLDQA-----------------------------RT 188

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            L   E       + SPI GT++  ++F          P + I+       +   V    
Sbjct: 189 GLEAAESKIGDTILKSPITGTVIK-RTFEVGETVAPGHPTI-ILGRLDKLEVEIGVPDGL 246

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           + +++ G    V    +    +K+ K  I  ID     +         + V ++I     
Sbjct: 247 VDNIRIGKNVDV----FIYGLDKEIKGTIASIDTTADLETRT------FGVKVEID---- 292

Query: 399 SDNNIELRNGFPAEVLFTAKNTT 421
            +    +R G  A+V+      T
Sbjct: 293 -NKENRIRPGMIAKVMMNTDKLT 314



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 46/130 (35%), Gaps = 10/130 (7%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK--------SA 116
           G+I    VE G  + +G  L+  +  +    ++  +   + L+   ++          + 
Sbjct: 71  GVIDHIHVEEGDIVKEGQTLMQLDPYDYQLGVNAARSQYQALQKQAESSINSGVNQAVAH 130

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           L+F+N +YD + K +E  E  +     +   T   V          +  +   ++     
Sbjct: 131 LEFVNTQYDRMLKLYE--EGAIPKKTLEEVETQIVVAQNKYQESLDASPIAEAQLDQART 188

Query: 177 NRLDLENKSS 186
                E+K  
Sbjct: 189 GLEAAESKIG 198


>gi|332186671|ref|ZP_08388414.1| hypothetical protein SUS17_1733 [Sphingomonas sp. S17]
 gi|332013323|gb|EGI55385.1| hypothetical protein SUS17_1733 [Sphingomonas sp. S17]
          Length = 357

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 60/175 (34%), Gaps = 12/175 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + L  +   V      +R++    +  +    +L+ E      +Y ++    +  +    
Sbjct: 105 SRLAAERAQVEAEIASVRQSQAVAQIDVNRTRQLFSEGLASRRDY-EQAQIKVADSGAKL 163

Query: 274 ADEMSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           A+  +KL  ++    +++   + +P  G I    + +   Y      L  + P      +
Sbjct: 164 AESRAKLNRIDVQLNRQSAQLVRAPRDGRIQNLNAAAGGAYVSAGTALAVVAPEQVERAV 223

Query: 331 RAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQ 377
              +  + +  ++ G            ++F  +  +    F   +  IDP  + Q
Sbjct: 224 ELMIDGRDVPLLRPGRPVRLEFEGWPAIQFSGWPSVAYGFFDGRVRTIDPNANAQ 278



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 70/191 (36%), Gaps = 15/191 (7%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKF 70
           P     +  +  +G+   I     +P   +    G+++    +D   ++ +   G ++++
Sbjct: 20  PRVTVAIAWILTVGVAVAIFILFFVPWLQTAQGRGQVVSLDPQDRAQDVTALVPGRVERW 79

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V +G Q+ +G P+    D++           +   R  ++ E +++     +   + + 
Sbjct: 80  YVHDGQQVKRGDPIARIVDLDPN-----LLSRLAAERAQVEAEIASV----RQSQAVAQI 130

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             +R  QL     +  ++        I       K+  +R +   ++       + L+RA
Sbjct: 131 DVNRTRQLF---SEGLASRRDYEQAQIKVADSGAKLAESRAKLNRIDVQLNRQSAQLVRA 187

Query: 191 LLSSHQKDLTM 201
                 ++L  
Sbjct: 188 PRDGRIQNLNA 198


>gi|253568708|ref|ZP_04846119.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251842781|gb|EES70861.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 355

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 101/295 (34%), Gaps = 31/295 (10%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E  +  + + LL    + +    K     +   +    +  + + + + N    +   + 
Sbjct: 76  EHQYVRQGDTLLVLDNREYQIKVKEAEAALLDAHGLQDVLHSGIETSHTNIAVQDANIAE 135

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A L   ++D    + L ++ +V +    Q +     +    +  + +++  L    E 
Sbjct: 136 AKAKLWQLEQDYHRFERLLKEESVPEQQYEQTKAAYEAAEARYQALVAQKQAALSQYAET 195

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +     A  L++                + L + +       + +P  G +   ++  
Sbjct: 196 SKKTTGVQAGILRK---------------EADLDLAKLNLSYTVLTAPYDGYM-GRRTLE 239

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Y Q  Q +  +V  +K  +I A     QI ++  G    V+         K F   +
Sbjct: 240 PGQYVQTGQTISYLV-RNKDKWITANYKETQIANIYIGQQVRVKVDALP---GKIFNGEV 295

Query: 368 EKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             I           P  +   N ++ Q+   V +++ +++ ++   +LR G   E
Sbjct: 296 TAISEATGSKYSLVPTDNSAGNFVKVQQRIPVRIELENIS-TEEMAQLRAGMMVE 349



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 51/152 (33%), Gaps = 12/152 (7%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK  + +    + QG  LL  ++ E    +   + ++ +     D   S ++  +  
Sbjct: 66  SGYIKDIRFKEHQYVRQGDTLLVLDNREYQIKVKEAEAALLDAHGLQDVLHSGIETSHTN 125

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL------------KMKLTRM 171
             V +      + +L      YH     +    +                   +  + + 
Sbjct: 126 IAVQDANIAEAKAKLWQLEQDYHRFERLLKEESVPEQQYEQTKAAYEAAEARYQALVAQK 185

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           ++      +   K++ ++A +   + DL + K
Sbjct: 186 QAALSQYAETSKKTTGVQAGILRKEADLDLAK 217


>gi|163752356|ref|ZP_02159552.1| hypothetical protein KT99_10858 [Shewanella benthica KT99]
 gi|161327763|gb|EDP98949.1| hypothetical protein KT99_10858 [Shewanella benthica KT99]
          Length = 349

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 53/347 (15%), Positives = 120/347 (34%), Gaps = 40/347 (11%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +  L    +     ++ T  S +      +   +    + +   +             +
Sbjct: 18  AIFSLPVSMLVAAEANVSTAPSGISGPGVTHLSEQTLLLTGQISSVQSQSFMVPKAGDAW 77

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-LLSSHQKDLTMMKNLFEKNAVS 212
            Y I  +     +       +  ++  + N+   L A LL    ++ ++  +L      +
Sbjct: 78  RYQIQWMLPEGSVAEPGQTVVIFDKSQIANQIEQLEASLLRVTAQEQSLSIDLTASVLQA 137

Query: 213 QNDLNQQERIVYKSTL---------------ELRENIHEQKNMLRHINELYDEANLEFAN 257
           + D+ QQ+  + KS L               E + N+ +  + L    +   E   + A 
Sbjct: 138 KFDVKQQQSELEKSRLDADVPADYIAAKDYAENQFNLMQAGSELSKAEQALKEVLDKQAA 197

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY------NQSFSSSNY 311
              +++ D  + Q   A  ++ L  LE       + + I G ++Y      N+ F+  + 
Sbjct: 198 SKAQLAIDRRRAQLELAQALNGLEQLE-------LKAKIKGPVLYGSDPRSNKKFAVGDT 250

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q  + +   VP  +   + A V    +  + +G   T+R         K F   I+ I 
Sbjct: 251 VQIGRQIAT-VPAMEELEVVAWVNEVDVDKLAEGSPVTLRL---DSQLSKPFTGSIKGIS 306

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
               +Q    Q+  +    ++++  A  D +I++  G    VL +  
Sbjct: 307 RQAQKQPAWGQSNWF---KVEVSFEA--DEDIKIVPGM--SVLVSTG 346


>gi|121533334|ref|ZP_01665162.1| efflux transporter, RND family, MFP subunit [Thermosinus
           carboxydivorans Nor1]
 gi|121307893|gb|EAX48807.1| efflux transporter, RND family, MFP subunit [Thermosinus
           carboxydivorans Nor1]
          Length = 366

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 74/235 (31%), Gaps = 20/235 (8%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +  +  +L    + +T  + L    +V   +L    R+   +    + N    +   +  
Sbjct: 78  AGRIEQVLVQDGQRVTAGQPLVTLESV---ELANAVRMAQDAVTRAQANYDNVQADYQRY 134

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             LY +  +     L  +   L+  Q   +   + L+   +     T+ +P+ G IV N+
Sbjct: 135 LTLYQQNAISR-QMLDSVETRLKVAQADLSSAYANLSSARQQYGYATVTAPVDG-IVANK 192

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           + +          L+  V      Y    +  K    V+ G TA +    Y       F 
Sbjct: 193 TATIGQVVAAGMQLLT-VEDINNVYAVVNIEQKDAGAVRVGQTAEITVDAYPGRT---FT 248

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +  I+P         +           T +A  +    L+ G   +V      
Sbjct: 249 GKVAVINPAAGASSRMFR-----------TKIAIDNAEGLLKPGMFVKVQLITGE 292



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 9/106 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I++  V++G ++  G PL+T E +E  + + + + ++   + + D         N + 
Sbjct: 79  GRIEQVLVQDGQRVTAGQPLVTLESVELANAVRMAQDAVTRAQANYD---------NVQA 129

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           D        ++  +   +     T  KV    +SS Y +L     +
Sbjct: 130 DYQRYLTLYQQNAISRQMLDSVETRLKVAQADLSSAYANLSSARQQ 175


>gi|260768703|ref|ZP_05877637.1| secretion protein HlyD family protein [Vibrio furnissii CIP 102972]
 gi|260616733|gb|EEX41918.1| secretion protein HlyD family protein [Vibrio furnissii CIP 102972]
          Length = 335

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/372 (12%), Positives = 103/372 (27%), Gaps = 83/372 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V  +    SG +    V +   +  G PL   +D +    +++ + +I   +  + 
Sbjct: 35  VKADVTLVSPEVSGRVTHLFVRDNQWVKAGDPLFQIDDQDYQANVNISQAAIAVAQSALA 94

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              S +       +  + A E           ++  +  + F   + S   S      + 
Sbjct: 95  NNASRMQLQQVSIEQAKTAIEGASAN-----AQFQQSERQRFQQLLKSASVSQTAFDHQN 149

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                 +  L+N    L A                                   +  +L 
Sbjct: 150 TQAINAKASLKNARLALDA-----------------------------------AHQQLN 174

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E++ +   + +   +  L                                  ++  
Sbjct: 175 TLTAEREQLNAQLKQAQSKLALNTI-----------------------------ALQRTL 205

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P+ G I   Q      + Q     + ++P  +  ++ A     Q+ H+  G    VR
Sbjct: 206 VKAPVDGFIANRQV-QEGKFVQPGMGTITLIP--ETVWLNANFKETQLSHLIAGQAVDVR 262

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNI 403
              Y D        +I+ I P    Q         T  + +V+    +KIT         
Sbjct: 263 LDMYPDT---VIAGLIDSITPATGAQFSMIPPQNATGNFVKVVQRVPVKITLTLPDSLKG 319

Query: 404 ELRNGFPAEVLF 415
            +  G  A V  
Sbjct: 320 RVYPGLSAVVSI 331


>gi|241203693|ref|YP_002974789.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857583|gb|ACS55250.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 413

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 96/313 (30%), Gaps = 13/313 (4%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E +   ++   Y  +         Q+L            +          +L      ++
Sbjct: 90  ESTDDAYVKADYTTVAPKVAGYISQVLVNDNDAVKAGQVLARIDDRDFQAALSQAKADVK 149

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +      +++ + SL ++++   +  +   +   +          +       +     +
Sbjct: 150 AAEAAITNIDAQISLQQSVIEQARATVDASQASLDFAVSDAARSARLITNGAGTQSRAEQ 209

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +      + E    A +   N +  +  + EQ         +     E       I
Sbjct: 210 TQSARDQAAAAV-ERDRAALVTAQNKVPVLQTEREQTVAQRDRAAAAAQQAELNLSYTDI 268

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++ + GT+   +S     Y      LM +VP   +  + A     Q+ ++  G    ++ 
Sbjct: 269 VAAVDGTV-GARSIRVGQYVTSGTQLMAVVPLHAVYVV-ANFKETQLTYISPGQPVEIKV 326

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIE--L 405
             + DI     K  ++ + P    +      +  T  + +++ +I   +   D  +   L
Sbjct: 327 DSFPDI---SIKGHVDSVSPASGLEFSLLPPDNATGNFTKIVQRIPVKIVIDDEPLSGLL 383

Query: 406 RNGFPAEVLFTAK 418
           R+G   E     K
Sbjct: 384 RSGMSVEPEIDTK 396



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/240 (10%), Positives = 69/240 (28%), Gaps = 9/240 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V +   +  G  L   +D +    +   K  +K     I    + +    +  
Sbjct: 110 GYISQVLVNDNDAVKAGQVLARIDDRDFQAALSQAKADVKAAEAAITNIDAQISLQQSVI 169

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +      ++ +  L   +     +   + N   +              +  + R      
Sbjct: 170 EQARATVDASQASLDFAVSDAARSARLITNGAGTQSRAEQTQSARDQAAAAVERDRAALV 229

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           ++  +  +   +++ T+ +      A  Q +LN            +   +  +   +   
Sbjct: 230 TAQNKVPVLQTEREQTVAQRDRAAAAAQQAELN---LSYTDIVAAVDGTVGARSIRVGQY 286

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL------SPIAG 298
                +       +   +  + ++ Q T+      + I   +    +I       SP +G
Sbjct: 287 VTSGTQLMAVVPLHAVYVVANFKETQLTYISPGQPVEIKVDSFPDISIKGHVDSVSPASG 346


>gi|291526107|emb|CBK91694.1| Membrane-fusion protein [Eubacterium rectale DSM 17629]
          Length = 521

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/379 (12%), Positives = 125/379 (32%), Gaps = 36/379 (9%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I       + +  V    Q+  G  LL ++    +  +++K++ I++L   + +EK  
Sbjct: 66  QTINLKDGQKVTEVYVTKDQQVKAGDKLLAYDVTSLSLSVEMKQLEIQSLENQLASEKQK 125

Query: 117 LDFLNNKYDVLEKA-----FESREEQLLDFLGKYHSTCSKVFNY-GISSVYRSLKMKLTR 170
           LD L N   V ++       E + +       + H   S +    GI +         T 
Sbjct: 126 LDKLKNTKPVEKQPETPVTPEPQPDTQPSAPDEQHDVISDLSEAKGIGTEDDPYVFTCTE 185

Query: 171 MRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
              +    L+  ++ S +   +   +   D+ ++          ++D  +       +  
Sbjct: 186 ASYVSGELLNTLSEKSAVARFVIGDASAPDMELIVRGDRLGGYDESDEIKLFLAGTTTAG 245

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLK--------EISRDLEQNQRTFADEMSKL 280
           +  ++    +      +   ++     A+           E+   +++  R+ AD   + 
Sbjct: 246 DASDDTEGSEPSDTKTDSATEQTAQTEADTAAEEKTYTADELKDAIKEQTRSVADVDLQK 305

Query: 281 TILEKTREQKTILSPIAGTIVYNQ----SFSSSNYAQQ---SQPLMKIVPHSKLTYIRAK 333
            I +   +   + S +   +VY +      +  + A       P +++   +   YI   
Sbjct: 306 RIAQADLK--ELQSELEDGVVYAKKDGIVTTVGDPANPPQDGTPFLQLS-GASGLYISGT 362

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ------QDNNLQTQEYY 387
           +    +  VK G +          +    ++  I +I  + S         N   +   Y
Sbjct: 363 IGELDLDTVKIGQSV----SAVNYMTGDTYEGTISEISNVPSDSVNYYGDSNPNSSFYEY 418

Query: 388 EVILKITDLAFSDNNIELR 406
              ++        +++EL 
Sbjct: 419 TAYIENPQNLKKGDSLELT 437


>gi|182419631|ref|ZP_02950876.1| putative auxiliary transport protein, membrane fusion protein (MFP)
           family [Clostridium butyricum 5521]
 gi|237665484|ref|ZP_04525472.1| efflux transporter, RND family, MFP subunit [Clostridium butyricum
           E4 str. BoNT E BL5262]
 gi|182376521|gb|EDT74098.1| putative auxiliary transport protein, membrane fusion protein (MFP)
           family [Clostridium butyricum 5521]
 gi|237658431|gb|EEP55983.1| efflux transporter, RND family, MFP subunit [Clostridium butyricum
           E4 str. BoNT E BL5262]
          Length = 428

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 80/260 (30%), Gaps = 43/260 (16%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +     I +    L++   ++ S        +     L+  +   Q++    K LF+  A
Sbjct: 104 QDIQNSIKTATAQLEVNEKQVNSAEQQLNSTQTSLEKLKINVDDAQRNYDREKALFDAGA 163

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VSQ++L+  E+ +  S  +        +     I         +  N             
Sbjct: 164 VSQSELDASEKTLNTSKADYNSGQANIEISKASIESAKASVEAQKVN------------- 210

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                    +  L+       I +PI+G I             Q   L KI   + ++Y+
Sbjct: 211 ---------IDKLQNDLNNVVIKAPISGVISEKNVN-VGQIINQGAVLAKI---NDISYV 257

Query: 331 RA--KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            A  +V  ++I  ++ G  A V       +      +I    D  +              
Sbjct: 258 FATIQVPQEKINDIEVGKPAEVTLEDNNTVHNGTLDSIDLSGDSTL-------------- 303

Query: 389 VILKITDLAFSDNNIELRNG 408
             +    +   ++N EL  G
Sbjct: 304 -RVFNCKIKMENSNKELLPG 322



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 82/206 (39%), Gaps = 16/206 (7%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE-------TTDLIDLKKVSIKNLRCHI 110
            I S  S  + K  VENG  + +G  +   +D +        T  +++ +  + +    +
Sbjct: 72  IISSKISAKVTKVVVENGQYVNEGDTIAVLDDQDIQNSIKTATAQLEVNEKQVNSAEQQL 131

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           ++ +++L+ L    D  ++ ++ RE+ L D      S      +    ++  S     + 
Sbjct: 132 NSTQTSLEKLKINVDDAQRNYD-REKALFDAGAVSQSE----LDASEKTLNTSKADYNSG 186

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK----NAVSQNDLNQQERIVYKS 226
             +I +++  +E+  + + A   +  K    + N+  K      +S+ ++N  + I   +
Sbjct: 187 QANIEISKASIESAKASVEAQKVNIDKLQNDLNNVVIKAPISGVISEKNVNVGQIINQGA 246

Query: 227 TLELRENIHEQKNMLRHINELYDEAN 252
            L    +I      ++   E  ++  
Sbjct: 247 VLAKINDISYVFATIQVPQEKINDIE 272


>gi|163853500|ref|YP_001641543.1| secretion protein HlyD family protein [Methylobacterium extorquens
           PA1]
 gi|163665105|gb|ABY32472.1| secretion protein HlyD family protein [Methylobacterium extorquens
           PA1]
          Length = 401

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/365 (11%), Positives = 102/365 (27%), Gaps = 85/365 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V NG  + +G  +   +D +    +      +      I             
Sbjct: 100 SGYLAAVPVVNGQAVKRGDVIARLDDGDYRLALKAAADKLATQESTIAR----------- 148

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              + +  E+ + Q+L    +  +  +     G +   R+  M+                
Sbjct: 149 ---VGRQAEAAQAQVLQSAAQIDAAKADAVRAG-ADYARATGMQAD-------------- 190

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                                      V+++ L+Q +    ++   ++           +
Sbjct: 191 --------------------------FVAKSRLDQAKADRDRTEAAVKSAEAALVAARAN 224

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +  L                  + + Q   A+  +      +  +   I +P  G +V N
Sbjct: 225 VEVLK---------------AQIREAQNLAAELRTAADRARRDLDFAVIRAPFDG-VVGN 268

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++  +  Y      +  +VP  +   + A     Q+  V+ G    +    Y D      
Sbjct: 269 KAVEAGAYVSPGSHIAALVPL-QSVRVDANFKETQLARVRPGQEVHIHVDAYPDR---DI 324

Query: 364 KAIIEKIDPII----SQQDNNLQTQEYYEVILKIT-----DLAFSDNNIELRNGFPAEVL 414
              +E + P      S    +  T  + +++ ++          +   + LR G    V 
Sbjct: 325 VGTVESLSPASGSVFSLLPPDNATGNFTKIVQRLPVRVHVPEDVAREGL-LRPGLSVVVK 383

Query: 415 FTAKN 419
              + 
Sbjct: 384 VDTRE 388


>gi|53724829|ref|YP_102756.1| multidrug resistance protein [Burkholderia mallei ATCC 23344]
 gi|121599580|ref|YP_992833.1| putative multidrug resistance protein [Burkholderia mallei SAVP1]
 gi|124385949|ref|YP_001026176.1| putative multidrug resistance protein [Burkholderia mallei NCTC
           10229]
 gi|126448102|ref|YP_001080554.1| putative multidrug resistance protein [Burkholderia mallei NCTC
           10247]
 gi|167001012|ref|ZP_02266813.1| putative multidrug resistance protein [Burkholderia mallei PRL-20]
 gi|254177816|ref|ZP_04884471.1| putative multidrug resistance protein [Burkholderia mallei ATCC
           10399]
 gi|254199705|ref|ZP_04906071.1| putative multidrug resistance protein [Burkholderia mallei FMH]
 gi|254206028|ref|ZP_04912380.1| putative multidrug resistance protein [Burkholderia mallei JHU]
 gi|254358400|ref|ZP_04974673.1| putative multidrug resistance protein [Burkholderia mallei
           2002721280]
 gi|52428252|gb|AAU48845.1| multidrug resistance protein, putative [Burkholderia mallei ATCC
           23344]
 gi|121228390|gb|ABM50908.1| putative multidrug resistance protein [Burkholderia mallei SAVP1]
 gi|124293969|gb|ABN03238.1| putative multidrug resistance protein [Burkholderia mallei NCTC
           10229]
 gi|126240972|gb|ABO04065.1| putative multidrug resistance protein [Burkholderia mallei NCTC
           10247]
 gi|147749301|gb|EDK56375.1| putative multidrug resistance protein [Burkholderia mallei FMH]
 gi|147753471|gb|EDK60536.1| putative multidrug resistance protein [Burkholderia mallei JHU]
 gi|148027527|gb|EDK85548.1| putative multidrug resistance protein [Burkholderia mallei
           2002721280]
 gi|160698855|gb|EDP88825.1| putative multidrug resistance protein [Burkholderia mallei ATCC
           10399]
 gi|243063190|gb|EES45376.1| putative multidrug resistance protein [Burkholderia mallei PRL-20]
          Length = 411

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 89/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVKAAQASLDAAGQQLASNRALTANTTVADHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 LAAAAKVRDAYLNNARNTLPAPVTGYVAK-RSVRVGQRVSPGTPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSVKYHGKVIGFSAGTGAAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++      ++ + +      +V   
Sbjct: 317 RLPVRVELDPKELKEHPLRIGLSMQVDVDIK 347



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKSGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L   L   +  +   +  ++   +V  +      
Sbjct: 116 GLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASLDA 175

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 176 AGQQLASNRALTAN 189


>gi|237752534|ref|ZP_04583014.1| macrolide-specific efflux protein macA [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229376023|gb|EEO26114.1| macrolide-specific efflux protein macA [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 415

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 77/222 (34%), Gaps = 27/222 (12%)

Query: 213 QNDLNQQERIVYKSTLELRENI---------HEQKNMLRHINELYDEANLEFANYLKEIS 263
           + +L + E  +  +  +L+            ++Q   L    +    + L+  +     +
Sbjct: 112 EQNLLRLEAQLASAKAQLKSAQVNLDEKKWQYQQLQTLHQKTQGKTPSKLDLQSAKTAYN 171

Query: 264 RDLEQN---QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQP 317
             L +    + +  +  + +   +   +   I +PI G ++  +S            +  
Sbjct: 172 AALSEVGIKEASITEIETSIRSTQVDLKNAHITTPIDGVVLS-RSIEVGQSVAASFQAPE 230

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
              I    +   +   ++   I  V  G         Y +   K F A +++++   ++ 
Sbjct: 231 FFIIAESLEEMELNVSISEADIGKVAIGQEVHFSVDSYPN---KTFSAKVDRVNFGANES 287

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +N+ +   YE  + +      + ++ LR G  A    T K+
Sbjct: 288 TDNIVS---YEARISVD-----NKDLLLRPGMSATADITTKS 321



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 60/149 (40%), Gaps = 3/149 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  I+ S+S++G +    + V I S  SGI+ +  V+   ++ +G  L   +      
Sbjct: 55  AKIGDIQTSISANGTLSP-THEVSIGSVISGIVLEVLVDVNDEVSKGQILAKIDSESIEQ 113

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   +  + + +  + + +  LD    +Y  L+   +  + +    L     +    +N
Sbjct: 114 NLLRLEAQLASAKAQLKSAQVNLDEKKWQYQQLQTLHQKTQGKTPSKLD--LQSAKTAYN 171

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +S V            SI   ++DL+N
Sbjct: 172 AALSEVGIKEASITEIETSIRSTQVDLKN 200


>gi|170700018|ref|ZP_02891043.1| secretion protein HlyD family protein [Burkholderia ambifaria
           IOP40-10]
 gi|170135077|gb|EDT03380.1| secretion protein HlyD family protein [Burkholderia ambifaria
           IOP40-10]
          Length = 407

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 87/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRQSDLSKAQDDLRRRVAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ +R      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVRAAQASVDAAQQQLASNRALTANTTIASHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        +  + +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 MAAAAKVRDAYLANARNVLPAPVTGYVAK-RSVQVGQRVSPGNPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSAVYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V ++I       + + +      +V   
Sbjct: 317 RLPVRIEIDPKELEKHPLRIGLSMQVDVDIK 347



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/134 (10%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQITGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L     + +  +   +  ++   +V  +      
Sbjct: 116 GLFVNDDQYRAQVALRQSDLSKAQDDLRRRVAVAQTGAVSQEEISHARDAVRAAQASVDA 175

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 176 AQQQLASNRALTAN 189


>gi|117918976|ref|YP_868168.1| secretion protein HlyD family protein [Shewanella sp. ANA-3]
 gi|117611308|gb|ABK46762.1| secretion protein HlyD family protein [Shewanella sp. ANA-3]
          Length = 351

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 94/302 (31%), Gaps = 27/302 (8%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DV +     + E L        S         ++S    ++    ++   +         
Sbjct: 58  DVTDNQHVRKGELLAQLEDNQFSAKVSQAEALLASAKADMQTLAAKVELQHALISQASAG 117

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A     ++ L+  K L   N  SQ+D++Q +     +   L E         R +
Sbjct: 118 VVAAQADKLRAEQQLSRAKKLKVSNYSSQDDVDQLQAGFDSAAAGLDEAKALLVAKEREL 177

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                             +  L Q         + L + +       + +P +G I   +
Sbjct: 178 AV---------------FNAQLNQAGSVVEQSNAALELAKIQLNDTRVTAPFSGVI-GKR 221

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y Q  Q L  +VP     +I A     QIQH++ G +  V    + D   K F 
Sbjct: 222 GAMVGQYVQPGQALYSLVP-DGAVWITANFKETQIQHMQPGQSVQVSLDAFPD---KTFT 277

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTA 417
            +I+ + P    +         T  + +++ +I     L  S     +  G  A V    
Sbjct: 278 GVIDSLSPASGAKFSLLPAENATGNFTKIVQRIPVRIRLDLSAEEARVVPGLSAVVKVDT 337

Query: 418 KN 419
            +
Sbjct: 338 AS 339


>gi|293364591|ref|ZP_06611312.1| competence factor transporter ComB [Streptococcus oralis ATCC
           35037]
 gi|307702843|ref|ZP_07639791.1| transport protein comB [Streptococcus oralis ATCC 35037]
 gi|291316849|gb|EFE57281.1| competence factor transporter ComB [Streptococcus oralis ATCC
           35037]
 gi|307623523|gb|EFO02512.1| transport protein comB [Streptococcus oralis ATCC 35037]
          Length = 449

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 57/439 (12%), Positives = 144/439 (32%), Gaps = 36/439 (8%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R +     R+ L   + ++ L  +++    EIS+S+   +     +  I+S  +  I   
Sbjct: 14  RRYHNFSSRVILPMSLMLVFLFGFAVFAEKEISLSTRATVEPSRIIANIQSTSNQRIVAN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            +E    + QG  L+ ++        +     ++ L+      K  L +L +        
Sbjct: 74  YLEENKLVKQGDLLVEYQQGAEAVQAEAYASQLEMLKDQ----KKQLGYLQSSLKEGSDQ 129

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           F   ++     + + + + +      +S    S+  +            +L +++     
Sbjct: 130 FPEADKFGYQEMFRDYLSQASSLRSNVSQQNASISSQNAAASQSQAEIGNLISQTEDKIR 189

Query: 191 LLSSHQKDLTMMKNLFEKNAV------------------SQN--DLNQQERIVYKSTLEL 230
              + +  +     L  +NA                   SQ    ++ Q   +  S    
Sbjct: 190 DYKTAKSAIEKGDQLDSQNAAYSFYQTYKNQAGDDSQAKSQVIAQVDAQIAQLESSLATY 249

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R           +   L  +     + +L ++ ++L    +   +  S   +     ++ 
Sbjct: 250 RVQYAGSGAQQAYATGLDSQLESLKSQHLVKVGQELTLLDQKILEAESGKKVQGGLLDKG 309

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYT 347
            I++   G +  N   S S    +   L ++ P       T + A ++ K +  VK G +
Sbjct: 310 KIIASEDGVLHLNPETSESTMVAEGTLLAQLYPSLEKEGKTKLTAYLSSKDVARVKIGDS 369

Query: 348 ATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
             VR+    D + +    + I  ID   ++ +       ++++  + +     +    LR
Sbjct: 370 --VRYTTTNDAKNQIFLDSTITSIDATATKTEKG----NFFKIEAETS--LTPEQAESLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGSEGRLTLITGKKSYLRY 440


>gi|308048920|ref|YP_003912486.1| secretion protein HlyD family protein [Ferrimonas balearica DSM
           9799]
 gi|307631110|gb|ADN75412.1| secretion protein HlyD family protein [Ferrimonas balearica DSM
           9799]
          Length = 338

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 84/296 (28%), Gaps = 23/296 (7%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V +  +  + ++L     + +          ++     L    +R     +       + 
Sbjct: 60  VSDNQWVEQGDELFRLDDRDYRAALSQAQAAVALADAGLASNDSRTALQRVQIEQARAQI 119

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +   A  S  Q +L   + L    +VSQ   + Q     ++   L       K   + + 
Sbjct: 120 ASAEANASLQQAELKRYRQLVTSGSVSQTQFDVQSARAVEAQTGLDNARLALKAAEQQLA 179

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L  E          E  R   + Q   +             E+  I +P+AG +   Q 
Sbjct: 180 TLASE------RVQLEAQRQQAEAQHQLSAI---------ALERTIIRAPMAGRVANRQV 224

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFK 364
                  Q     + +VP  +  ++ A     Q+  +  G    V    Y       +  
Sbjct: 225 -QIGKLVQPGMAALTLVP--EAVWLEANFKETQLAQMAAGQAVEVVLDGYPDQPISGEVD 281

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL----RNGFPAEVLFT 416
           ++        S       T  + +V+ ++          EL      G  A V   
Sbjct: 282 SVTHATGAQFSLLPPQNATGNFVKVVQRVPVKIRLQLPAELKDRVYPGLSATVTVK 337



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/337 (12%), Positives = 108/337 (32%), Gaps = 20/337 (5%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           L++++ +  +   ++   I  S  S+     + ++  I    SG +    V +   + QG
Sbjct: 10  LIAVLALGLVGASALYYGIGSSGVSTDNAYVKADLTLIAPQVSGQVVGVAVSDNQWVEQG 69

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L   +D +    +   + ++      + +  S       + +       S E      
Sbjct: 70  DELFRLDDRDYRAALSQAQAAVALADAGLASNDSRTALQRVQIEQARAQIASAEANASLQ 129

Query: 142 LGKYHSTCSKVFNYGISSVY--RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             +       V +  +S           +     +   RL L+     L A L+S +  L
Sbjct: 130 QAELKRYRQLVTSGSVSQTQFDVQSARAVEAQTGLDNARLALKAAEQQL-ATLASERVQL 188

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              +   E    +Q+ L+            +   +  ++  +  + +    A L      
Sbjct: 189 EAQRQQAE----AQHQLSAIALERTIIRAPMAGRVANRQVQIGKLVQPGM-AALTLVPEA 243

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------Q 313
             +  + ++ Q         + ++      +    PI+G +  + + ++           
Sbjct: 244 VWLEANFKETQLAQMAAGQAVEVVLDGYPDQ----PISGEV-DSVTHATGAQFSLLPPQN 298

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            +   +K+V       IR ++  +    V  G +ATV
Sbjct: 299 ATGNFVKVV-QRVPVKIRLQLPAELKDRVYPGLSATV 334


>gi|310644348|ref|YP_003949107.1| efflux transporter, rnd family, mfp subunit [Paenibacillus polymyxa
           SC2]
 gi|309249299|gb|ADO58866.1| Efflux transporter, RND family, MFP subunit [Paenibacillus polymyxa
           SC2]
          Length = 469

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/365 (12%), Positives = 109/365 (29%), Gaps = 30/365 (8%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +   ++  G+ + +GT +   +D +    +     SI+     ID  ++ L    + 
Sbjct: 72  GGTVASAEITTGTLVQKGTTIARLDDADYRLQVAQATASIQEALAGIDNAQANLQAATSA 131

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY-LNRLDLE 182
               +    +    +           SKV     +   +  +  + + +S Y   + D E
Sbjct: 132 IQSADAGIANARANV-----------SKVNKGARAQEKQQAQTTVDKAQSAYNKAKTDSE 180

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
               L  A  ++   +     N       +   L   E+     +L L     E+   ++
Sbjct: 181 RTQKLFEAGAATASDNENARLN-------TTTALQNLEQAKASLSLLLEGATAEEHQSVQ 233

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              +       +     ++     +Q +  +   +      E    +  + SP+ G I+ 
Sbjct: 234 ASFQNAIAGKTKALAASEQAEASQKQARANYEKALVAKDQAELALSRTRLASPVNGVILD 293

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +  +     Q + +I        +   V   +I+  KKG    V    Y + R+  
Sbjct: 294 KIVNT-GDLVASGQAVYRIG-SIDRLKVLLPVPDSEIKDWKKGQQVKVAL--YEETRQGT 349

Query: 363 FKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
              +             +       +++    +       +D N  L     AE +    
Sbjct: 350 VSNVYPSTSTDTGRVNVEIVIANPQRDWLPGQVIKAAHQVTDKNGILVP---AEAVINTG 406

Query: 419 NTTLA 423
           +    
Sbjct: 407 SKPFI 411


>gi|323528546|ref|YP_004230698.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1001]
 gi|323385548|gb|ADX57638.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1001]
          Length = 391

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 89/292 (30%), Gaps = 21/292 (7%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V +  F    + L+    + +          +SS   ++     +         +   + 
Sbjct: 104 VQDNQFVHAGQVLVRLDARDYDARLAQAAAEVSSAQAAVTELQAKKSLQLATINEQAAEV 163

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L+    D    + L + +AVS   + +    + K+   +  +        R I 
Sbjct: 164 RASGAELTRSAADQLRYRELVKDDAVSNQVVERANADLSKAHAAVDRSSAALIAAQRQIA 223

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L                  +   +   A   +   +     E  TI SPI G I  N++
Sbjct: 224 VL---------------DAQIGDAEARIATAQAARRVAALNVEYTTIRSPIDGYI-GNRT 267

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A     L+ +VP S   +I A     Q++ ++ G    V     +       ++
Sbjct: 268 ARVGLLANTGVSLLTVVPASG-LWIDANFKEDQLKKMRVGDAVDVELDASSQHMHGVVES 326

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEV 413
           +        S       T  + +++    +++      +    LR G  A V
Sbjct: 327 LAPATGATFSVLPAENATGNFTKIVQRVPVRVRLNVPKEMQGVLRPGLSATV 378


>gi|207721596|ref|YP_002252035.1| multidrug resistance transport protein [Ralstonia solanacearum
           MolK2]
 gi|206586757|emb|CAQ17342.1| multidrug resistance transport protein [Ralstonia solanacearum
           MolK2]
          Length = 391

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/321 (11%), Positives = 87/321 (27%), Gaps = 30/321 (9%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           ++  I T    +     + DV         ++LL    + ++     +   + +   S  
Sbjct: 72  IQADIVTVAPKVSGYVERVDVANNQEVRAGQRLLRIDPREYAAQLAQYQAQVEAANASAD 131

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               ++ +          +                   +L    A +++ L+  +    +
Sbjct: 132 NARAQLATQKAAIAQARAQLQSAEHDAQFTASQTQRYASLVASGAETRDRLSTLQNQAAQ 191

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +                 I  L                  L Q +       ++  + E 
Sbjct: 192 ARANAAAQRAALTKATLEIAAL---------------QAQLRQAEAQAKTARAQAAVAEV 236

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 + +   G +  +Q      +      LM +VP     YI A     Q+ H++ G
Sbjct: 237 NLAATELHASTDGRVGDSQVR-IGQFVSAGTRLMSVVPAH--LYITANFKETQLSHMRIG 293

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSD 400
               V    + D      +  +E + P    Q         T  + +++ ++   +A   
Sbjct: 294 QPVHVHVDAFPDE---AIEGHVESLSPGTGAQFSLLPPQNATGNFIKIVQRVPVRIALDV 350

Query: 401 NNIELRN----GFPAEVLFTA 417
            +  ++     G    V    
Sbjct: 351 TDDRIKPLLAAGMSVTVDVDT 371


>gi|168703475|ref|ZP_02735752.1| hypothetical protein GobsU_28340 [Gemmata obscuriglobus UQM 2246]
          Length = 432

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/375 (12%), Positives = 125/375 (33%), Gaps = 20/375 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E ++  + +   G+I +  VE    +  G  L   +       +DL           + 
Sbjct: 30  VESHLTHLGAQTPGLITRVLVEERDAVKAGQLLAEIDPEPHRRAVDLAAAKRAKAEGELT 89

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--------FNYGISSVYRS 163
            E+S  + L  ++     A ++        + +  +    V             +     
Sbjct: 90  LERSTWERLEKEHPRRVAAAKADLAFAEAGVSQAKTELEVVRVDVDKAVREAEAAVASAK 149

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
             +      +    RL  E     ++   +   +          +  + +   N+++  +
Sbjct: 150 ASLVKADEDATRYERLFKEASVPKVKWEDAVKARAAADADVQTAEAKLDRATSNRRKVAI 209

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +  + +  +  ++      + EL      E    +K + R+++Q +R  A   ++L   
Sbjct: 210 AEQAVAVASSRRDKAAEELRLTELGRLTVEEAGLKVKVLEREVDQAKRNEASVRTQL--- 266

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               E   +++P  G +V  +  +  ++A    P++ +     L Y+ A +   ++  V 
Sbjct: 267 ----EYCRVVAPFDGIVVK-RYRNPGDHAPLGSPVLSLY-DPDLVYVTAYLEEDRLAGVS 320

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G  A ++   +      +   + +      +    ++ + E+ +V  ++      D + 
Sbjct: 321 PGNAAVLKLDAFRQPLAGRVVWVGQATGANFALVPRDVSSGEFTKVPQRVPVRILPDRDE 380

Query: 404 E---LRNGFPAEVLF 415
               LR G    V+ 
Sbjct: 381 RWGDLRPGLSVSVVI 395


>gi|115361301|ref|YP_778438.1| secretion protein HlyD family protein [Burkholderia ambifaria AMMD]
 gi|115286629|gb|ABI92104.1| secretion protein HlyD family protein [Burkholderia ambifaria AMMD]
          Length = 460

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/412 (12%), Positives = 126/412 (30%), Gaps = 82/412 (19%)

Query: 10  KRNHPASLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           KR     L  +  ++++ +I GL+ W      E +  +      + N V +    SG + 
Sbjct: 116 KRPGKKPLIILGAVAVVLVIAGLVWWLATRNQESTDDAY----TDGNAVAVAPHVSGYVT 171

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V++ + + +G  L+  +  +    +D         R  +   ++ LD    + D   
Sbjct: 172 RLAVDDNTYVHRGDVLVEIDPRDYRAQVD-------AARAQLGLAQAQLDASRVQLD--- 221

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                  + +    + Y+  + ++    + Y   L  + +   +
Sbjct: 222 -----------------------IAHVQFPAQYKQARAQIESAEAAYRQALAAQERQRAV 258

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A  +S Q                  D    +R    + + + +      +++       
Sbjct: 259 DARATSQQ----------------AIDAADAQRASADANVAMAQAQARTASLVPQ----- 297

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                     +++    +E+ ++      ++L           + +P  G +        
Sbjct: 298 ---------QIRQAETAVEERRQQVLAARAQLDTANLNLSYCEVRAPSDGWVTRRNV-QL 347

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +Y Q    +  +V  +   +I A     Q++ ++ G    V    Y D+        ++
Sbjct: 348 GSYLQAGASVFSVV--TPRVWITANFKESQLERMRIGDRVDVSVDAYPDL---DLHGHVD 402

Query: 369 KI--------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
            I            ++       +    V +KI       NN  L  G  AE
Sbjct: 403 SIQLGSGARFSAFPAENATGNFVKIVQRVPVKIVLDGPLPNNPPLGLGLSAE 454


>gi|291296525|ref|YP_003507923.1| efflux transporter, RND family, MFP subunit [Meiothermus ruber DSM
           1279]
 gi|290471484|gb|ADD28903.1| efflux transporter, RND family, MFP subunit [Meiothermus ruber DSM
           1279]
          Length = 409

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 99/296 (33%), Gaps = 42/296 (14%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +  E R  +             +  N        +  ++  R R I     +  +  + L
Sbjct: 66  RVAEVRVREGQAVQAGQVLAVLETVNETAQRRVAAENLQALRAR-IQAQEAEFASNRTRL 124

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L   +++L++++ L     V+ N++ Q ER V     +L   +  + +  R +    
Sbjct: 125 QNQLQEARRNLSLLQALLATGGVAANEVRQAERQVKDLEAQLTSLLQNRLSTQREL---- 180

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI------VY 302
                                Q       ++L  LE+T  Q T+ +P+AG +      V 
Sbjct: 181 ---------------------QAQLQARQNELAALERTIAQSTLRAPVAGVVSSVGFLVG 219

Query: 303 NQSFSSSN-YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
            ++ +        S P +++V       ++A+++  +I  V+ G    +         E+
Sbjct: 220 VETTAPGGSGTSPSAPAIRLVEAGS-LRVQARLSEAEIPFVRPGQPVRIELDA---APEQ 275

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
             +  ++++   +  +           V ++  D          R G  A    T 
Sbjct: 276 PLQGKVDRLG--VQAEVAAGGGSAVLPVFIRFLDP---QAEALARPGLTATANITT 326



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 72/185 (38%), Gaps = 27/185 (14%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V +SG +  E  V  +  P  G + + +V  G  +  G  L   E +  T    +   ++
Sbjct: 46  VRASGTV--EARVYTLTFPRPGRVAEVRVREGQAVQAGQVLAVLETVNETAQRRVAAENL 103

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           + LR  I  +++  +F +N+  +  +  E+R    L                 + ++  +
Sbjct: 104 QALRARIQAQEA--EFASNRTRLQNQLQEARRNLSL-----------------LQALLAT 144

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
             +    +R       DLE + + L       Q  L+  + L  +    QN+L   ER +
Sbjct: 145 GGVAANEVRQAERQVKDLEAQLTSL------LQNRLSTQRELQAQLQARQNELAALERTI 198

Query: 224 YKSTL 228
            +STL
Sbjct: 199 AQSTL 203


>gi|315612126|ref|ZP_07887042.1| competence factor transporter ComB [Streptococcus sanguinis ATCC
           49296]
 gi|315315789|gb|EFU63825.1| competence factor transporter ComB [Streptococcus sanguinis ATCC
           49296]
          Length = 449

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 58/444 (13%), Positives = 143/444 (32%), Gaps = 40/444 (9%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R +     R+ L   +  + L+ +++    EIS+S+   +     +  I+S  + +I   
Sbjct: 14  RRYHNFSSRVILPMSLLFMFLLGFAVFAEKEISLSTRATVEPSRIIANIQSTSNQLIVAN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            +E    + QG  L+ ++       ++     ++ L+      K  L +L          
Sbjct: 74  YLEENKLVKQGELLVQYQQGAEAVQVEAYTSQLEMLKDQ----KKQLGYLQFSLKEGSDQ 129

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           F   ++     + + + + +      +S    S+  +            +L +++     
Sbjct: 130 FPEADKFGYQEMFRDYLSQANGLRSNVSQQNASISSQNAAASQSQAEIGNLISQTEEKIR 189

Query: 191 LLSSHQKDLTMMKNL----------------------FEKNAVSQNDLNQQERIVYKSTL 228
              + +  +     L                       +   ++Q D   Q   +  S  
Sbjct: 190 DYKTAKSAIEKGDQLDSQNPAYSFYQTYKNQGEEDPQAKSQVIAQVD--AQIAQLESSLA 247

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             R           H   L  +     + +L ++ ++L    +   +  S   +     +
Sbjct: 248 TYRVQYAGSGAQQAHATGLDSQLESLKSQHLVKVGQELTLLDQKILEAESGKKVQGGLLD 307

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKG 345
           +  I +   G +  N   S S  A +   L ++ P       T + A ++ K +  VK G
Sbjct: 308 KGKITASEDGVLHLNPETSDSTMAAEGTLLAQLYPSLEKEGKTKLTAYLSSKDVARVKIG 367

Query: 346 YTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
            +  VR+    D + +    + I  ID   ++ +       ++++  +      S+    
Sbjct: 368 DS--VRYTTTNDAKNQIFLDSTITSIDATATKTEQG----NFFKIEAETN--LTSEQAAT 419

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIH 428
           LR G    +       +  +    
Sbjct: 420 LRYGLEGRLQMITGKKSYLRYFWD 443


>gi|303257475|ref|ZP_07343488.1| heat shock protein HtpX [Burkholderiales bacterium 1_1_47]
 gi|302859832|gb|EFL82910.1| heat shock protein HtpX [Burkholderiales bacterium 1_1_47]
          Length = 328

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 116/350 (33%), Gaps = 79/350 (22%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            IK   VE G  +  G P+               +     L+  I+  K+A       Y 
Sbjct: 53  RIKSILVEEGDFVKAGQPVA--------------EQETDILKIEIEQAKAAEQAAYQTYL 98

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            L+    SR E +           S++        +  +       +   +++  L+ +S
Sbjct: 99  ALKNG--SRPEDIAKAEAAVLVAQSRLHLAQKD--FERVDGIFKSTKGQGVSKQSLDTQS 154

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           S L+                     V++N+L   ++ +  + +  R              
Sbjct: 155 SQLQ---------------------VAKNELFSAQKSLELAKIGPRA------------- 180

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                              D+ +    +    +++  LE   +Q T+ +P+  T V ++ 
Sbjct: 181 ------------------EDVARAYAQWQQTKAQVAQLELKLKQSTLYAPLD-TTVRSRL 221

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
               + A    P++ +   +   ++RA V    +  +K G  A V    Y + +      
Sbjct: 222 LQPGDMASAQVPVLALA-INSPKWVRAYVNEVNLGKIKPGQQAYVTIDAYPNEKIPGHVG 280

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            I  +     +  Q  +L+T   YEV + + D    +N++ L  G PA V
Sbjct: 281 FISSVAEFTPKTVQTPDLRTNLVYEVRILVDD---KENHLRL--GMPATV 325


>gi|224023882|ref|ZP_03642248.1| hypothetical protein BACCOPRO_00599 [Bacteroides coprophilus DSM
           18228]
 gi|224017104|gb|EEF75116.1| hypothetical protein BACCOPRO_00599 [Bacteroides coprophilus DSM
           18228]
          Length = 356

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 92/295 (31%), Gaps = 31/295 (10%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E  F    + L+    + +    K     +     S  +  + +R+ +    + +   + 
Sbjct: 76  EHQFVHEGDTLVVLDNREYLIRQKEAEASLLDAQGSRDVLTSGIRTSHTRIAEQDANLAE 135

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A L   ++D    + L ++ +V +   +Q +     +       + +++      +  
Sbjct: 136 AKARLWQTEQDYRRYERLLKEESVPEQQYDQAKASYEAARAHYDALLRQKEAAHSQYD-- 193

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                        E S+     +       + L +         + +P +G +   ++  
Sbjct: 194 -------------ETSKKQVGVEAGILRAEAALDLANLNLSYTVVTAPYSGYM-GRRTLE 239

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Y    Q L  IV  S   +I A     QI ++  G    ++         K     +
Sbjct: 240 PGQYVSAGQTLSYIVRQSGK-WITANYRETQIANIYIGQPVRIKVDGLP---GKVLHGHV 295

Query: 368 EKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             I           P  +   N ++ Q+   V + + +      ++ LR G   E
Sbjct: 296 TAISEATGSKYSLVPTDNSAGNFVKVQQRIPVRIDLDEADEKYMSL-LRAGMMVE 349



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 71/228 (31%), Gaps = 12/228 (5%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H  +K LKR    ++    +  +I   GL+  +      I+   + +   +  +  +   
Sbjct: 5   HLKYKRLKRQKRRNIILNIVCLLIAGSGLVWTANYFWRYINYEITNDAFVDQYIAPVNVR 64

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G I++ +      + +G  L+  ++           +  K     +   + + D L +
Sbjct: 65  VAGYIQEVRFREHQFVHEGDTLVVLDN-------REYLIRQKEAEASLLDAQGSRDVLTS 117

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                      ++  L +   +   T      Y       S+  +          +   E
Sbjct: 118 GIRTSHTRIAEQDANLAEAKARLWQTEQDYRRYERLLKEESVPEQ-----QYDQAKASYE 172

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
              +   ALL   +   +      +K    +  + + E  +  + L L
Sbjct: 173 AARAHYDALLRQKEAAHSQYDETSKKQVGVEAGILRAEAALDLANLNL 220


>gi|134295578|ref|YP_001119313.1| secretion protein HlyD family protein [Burkholderia vietnamiensis
           G4]
 gi|134138735|gb|ABO54478.1| secretion protein HlyD family protein [Burkholderia vietnamiensis
           G4]
          Length = 407

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 87/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QIALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ +R      D A  E A+     +     +    
Sbjct: 157 EE------------------ISHARDAVRAAQASVDAAQQELASNRALTANTTIASHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        +  + +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 MAAAAKVRDAYLANARNVLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLRHMRIGQPVELTADIYGSSAVYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V ++I       + + +      +V   
Sbjct: 317 RLPVRIEIDPKDLDKHPLRIGLSMQVDVDIK 347



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/136 (10%), Positives = 44/136 (32%), Gaps = 5/136 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   I  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTIKAGDPLVVLDPADSQIALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                 D    +  + +      ++ L     +     ++        +  +        
Sbjct: 116 GLFVNDDQYRAQVALRQSDLSKAQDDL-----RRRLAVAQTGAVSQEEISHARDAVRAAQ 170

Query: 172 RSIYLNRLDLENKSSL 187
            S+   + +L +  +L
Sbjct: 171 ASVDAAQQELASNRAL 186


>gi|319404651|emb|CBI78253.1| multidrug resistance efflux pump VceA protein [Bartonella
           rochalimae ATCC BAA-1498]
 gi|319404670|emb|CBI78272.1| multidrug resistance efflux pump VceA protein [Bartonella
           rochalimae ATCC BAA-1498]
          Length = 362

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/311 (10%), Positives = 91/311 (29%), Gaps = 14/311 (4%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            ++      +        E+L     +       +F         +L      + +    
Sbjct: 51  AYVQGDIAAISPKLSGYIEELSVKANQTVKKGDTLFRLESGDYQIALDQTKAHLDTQQKI 110

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            + ++ +     + L   Q        +     ++   + + +   Y S   +       
Sbjct: 111 LMRIDAQIVAAHSALDDAQAQKAAASAIATNAQLTLQRITELKTDRYVSQSNVDNAKSAY 170

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +  + ++     +     AN    +     + +    +        ++  +   + +P  
Sbjct: 171 EQAIANVTRADAQIAAARANIQV-LEAQRHEVESQTKNLELTRDKAKRDLDSTILRAPFD 229

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I    +          Q L  +VP     YI A     Q+Q+++ G TA +    +  
Sbjct: 230 GIIGNLTAKKGDFVVD-GQRLAALVPIH-ALYIEANYKETQLQNIQSGQTAYISIDAF-- 285

Query: 358 IREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            ++  F+  +  + P           Q      T+    + ++I+    +  +  ++ G 
Sbjct: 286 -KKDVFEGTVLSVSPATGAVFSLLPPQNATGNFTKITQRIPIRISIPEHALKSGRIKAGM 344

Query: 410 PAEVLFTAKNT 420
              V    +N 
Sbjct: 345 SVTVTVDTRNR 355



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 81/263 (30%), Gaps = 19/263 (7%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
            + ++  I    SG I++  V+    + +G  L   E         +T   +D ++  + 
Sbjct: 53  VQGDIAAISPKLSGYIEELSVKANQTVKKGDTLFRLESGDYQIALDQTKAHLDTQQKILM 112

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESRE---EQLLDFLGKYHSTCSKVFNYGISSVY 161
            +   I    SALD    +         + +   +++ +     + + S V N    S Y
Sbjct: 113 RIDAQIVAAHSALDDAQAQKAAASAIATNAQLTLQRITELKTDRYVSQSNVDNA--KSAY 170

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                 +TR  +               R  + S  K+L + ++  +++  S         
Sbjct: 171 EQAIANVTRADAQIAAARANIQVLEAQRHEVESQTKNLELTRDKAKRDLDSTI----LRA 226

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                   L     +     + +  L     L      KE    L+  Q      +S   
Sbjct: 227 PFDGIIGNLTAKKGDFVVDGQRLAALVPIHALYIEANYKE--TQLQNIQSGQTAYISIDA 284

Query: 282 ILEKTREQKTI-LSPIAGTIVYN 303
             +   E   + +SP  G +   
Sbjct: 285 FKKDVFEGTVLSVSPATGAVFSL 307


>gi|312796194|ref|YP_004029116.1| multidrug resistance protein A [Burkholderia rhizoxinica HKI 454]
 gi|312167969|emb|CBW74972.1| Multidrug resistance protein A [Burkholderia rhizoxinica HKI 454]
          Length = 413

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 84/271 (30%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L   + ++R++Y+N    +   +  ++ LS  Q DL     + +  AVSQ
Sbjct: 99  RVALQQAEADLAQTVRQVRTLYVNNNQYQAAVAQRQSDLSRAQNDLRRRLTIAQTGAVSQ 158

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +          
Sbjct: 159 EE------------------ISHARDAVKAAQAALDIAQQQLASNRALTANVAIAQHPNV 200

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM IVP ++  ++ A 
Sbjct: 201 LAAAAKVKDAYLNYARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMAIVPLNE-VWVDAN 258

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--EKKFKA-IIEKIDPIISQQDNNLQTQ-----E 385
               Q++H++ G    V    Y        K +                N         +
Sbjct: 259 FKEVQLKHMRIGQPVKVVSDVYGSSVVYHGKIQGFSAGTGSAFSLLPAQNATGNWIKVVQ 318

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++       + + +     A V   
Sbjct: 319 RLPVRVQLDPEELKQHPLRIGLSMTANVSIK 349



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/127 (10%), Positives = 42/127 (33%), Gaps = 5/127 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
              NVV+I    +G +   + ++   + +G PL+  +  ++   +   +  +        
Sbjct: 58  VNGNVVQITPQVTGTVTAVKADDTQVVQKGQPLVLLDPADSRVALQQAEADLAQTVRQVR 117

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +++  +        + D+     + R    +   G             + +   +L +
Sbjct: 118 TLYVNNNQYQAAVAQRQSDLSRAQNDLRRRLTIAQTGAVSQEEISHARDAVKAAQAALDI 177

Query: 167 KLTRMRS 173
              ++ S
Sbjct: 178 AQQQLAS 184


>gi|190893183|ref|YP_001979725.1| protein secretion protein, HlyD family [Rhizobium etli CIAT 652]
 gi|190698462|gb|ACE92547.1| probable protein secretion protein, HlyD family [Rhizobium etli
           CIAT 652]
          Length = 406

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 100/313 (31%), Gaps = 28/313 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +      +       E + +       S  +  F   +      L ++  ++ +
Sbjct: 92  QADMVGVTTDVSGIVDQINVHENEAVKAGQVLFSLRADSFKIALDGAKAQLGVQRNQIMN 151

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +  +      + +  +A L  +Q      ++L    + +Q+  ++ +  +  +  ++   
Sbjct: 152 LKASYQQSLAEITQAQADLPYYQDQFDRQQSLVNNGSATQSAYDEAKHNLEAARQKVTVA 211

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             E    L  +    D+   E   YL+                 S +   ++  +   + 
Sbjct: 212 KAEAATTLAQLGGSADQPIEENPLYLQ---------------AKSNVDNAQRELDHSVVK 256

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +    +    +Y Q SQ    +V  +   +I A     ++ +VK G  A +   
Sbjct: 257 APFDGIVTNVNALQVGSYLQASQQAFSLV-ATDHLWIAASPKETELTYVKSGQMAEIYVD 315

Query: 354 HYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            Y  +    +K  +E I P          +Q       +    + ++++          L
Sbjct: 316 TYPGVT---WKGKVESISPASGSSFALLPAQNTTGNWVKVVQRIPMRVSIEDVQGKP-PL 371

Query: 406 RNGFPAEVLFTAK 418
           R G    V     
Sbjct: 372 RVGMSTVVDVDTG 384


>gi|116626959|ref|YP_829115.1| secretion protein HlyD family protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116230121|gb|ABJ88830.1| secretion protein HlyD family protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 475

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/393 (13%), Positives = 113/393 (28%), Gaps = 89/393 (22%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   V++SGE+  + N + I +   G +K+  V+ G ++ +G                L 
Sbjct: 45  LTSLVTASGEVKPK-NYINIGANAQGELKEILVKEGDRVRRGQL--------------LA 89

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++        +D +++ L+         E   ++ +E L                     
Sbjct: 90  RIENVQPEADVDAQRATLNSAEADSAAAEAGLKAADENL--------------------- 128

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                                L+ +    +A L   + D    ++L++++ +++ D    
Sbjct: 129 -------------------RTLQAQIDKDKADLEHTKADFDRSESLYKEHLLAKQDW--- 166

Query: 220 ERIVYKSTLELRE-NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                    EL++     Q+  +        +A  +    L      L   Q+  A   +
Sbjct: 167 ---------ELKKFTFEAQRATVTQSEMRLVQARAQREQSL----AQLASAQKRIAQYKA 213

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS------QPLMKIVPHSKLTY-IR 331
            L       ++    +P+ G +                       +M I           
Sbjct: 214 VLVRFNDILQKHNAFAPLDGVVTNLPVR-VGETVVPGVQNSAASTIMTI--ADMSLITAE 270

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            KV    I +VK      V      +   K FK  + +I      +   +   +      
Sbjct: 271 VKVDETDIVNVKLSQAVDVTIDAIPN---KTFKGHVVEIGNTAILRSTGVAASQSAISSQ 327

Query: 392 KITD----LAFSDNNIELRNGFPAEVLFTAKNT 420
           +  D    +A  +   E+R G       T    
Sbjct: 328 EAKDFKVVVALDNPPDEIRPGLSCTAKITTATR 360


>gi|282890809|ref|ZP_06299329.1| hypothetical protein pah_c026o158 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499402|gb|EFB41701.1| hypothetical protein pah_c026o158 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 362

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/396 (11%), Positives = 106/396 (26%), Gaps = 73/396 (18%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L IIGI+  + W   +  +     SG    E   + +    +G IK+  VE G  +  G 
Sbjct: 15  LLIIGILAFVLWQSYMQHKKKDIISGNGRIEATEINLAPRIAGQIKELLVEEGDYVKAGQ 74

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L   +        D+ +  ++  +  +   +S +                         
Sbjct: 75  VLAYMDP-------DVLEAQLREAKGRLLAARSDVA------------------------ 103

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                                  +  +R+      +   E       A L   +K L   
Sbjct: 104 -----------------------INQSRLIQKKSEKAAAEAVLKQREAELEVSEKRLARS 140

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             L  + A SQ   +        +       I + +     I    +E            
Sbjct: 141 SKLVLEGATSQQTADDDYASFKSAVAAKNAAIAQVEADDAAIVTAQEEVTG--------- 191

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
                  + +       +  +E   +   + +P  G + Y +   +         ++ +V
Sbjct: 192 ------AKSSVEANEGSVAKIEADIKDSALKTPRDGRVQY-RVAQAGEVVPAGGAVLSLV 244

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNN 380
             S   Y+   ++      V  G    +            + + I  +     +  +   
Sbjct: 245 DLSD-VYMTFFLSTAYAGKVSIGQEVRLILDAAPYYVIPAYVSFISDVAQFTPKTVETAT 303

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            + +  + +  +I      +N  +++ G P      
Sbjct: 304 EREKLMFRIKAQIPKDFLKENIAQIKTGLPGVAYLR 339


>gi|220910090|ref|YP_002485401.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 7425]
 gi|219866701|gb|ACL47040.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           7425]
          Length = 432

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 110/339 (32%), Gaps = 28/339 (8%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV--LEKAFESREEQLLDFLGKYHST 148
            +++ IDL+  ++        T + +            +      R  QLL   G     
Sbjct: 39  RSSNQIDLQNYTVPVQAAQNLTVRVSASGTVVPIQTVNISPKTAGRLVQLLVEQGDRVRQ 98

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              +     S +   L      +      + ++   +       +  Q +    +     
Sbjct: 99  GQIIARMDSSDIEAQLAQAQANLAEAQARQAEILAGNRAQEIAQAQAQVNAAQARVDLTS 158

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             V++N    +E  + +  L+  E I +  +   ++ E     NL  A    E   ++ Q
Sbjct: 159 GRVTRNRPLAEEGAISRDRLD--EVIADDNSARANLREAQQRLNLLRAGSRPE---EIAQ 213

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK-------- 320
            +   A   ++L  ++       I +P  G I   +  +   +   +             
Sbjct: 214 TRAAVAAAAAQLKAVQVQLNDTIIRAPFNGVITQ-KYATEGAFVTPTTSASSTSSATSTS 272

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           IV  ++   I AKV    I  +K+G    ++   Y D     F+  +  + P    + N 
Sbjct: 273 IVAIAEGLEILAKVPEVDIAQIKRGQRVEIQADAYPDRT---FQGQVRLVSPEAVVEQNV 329

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 ++V + I          +LR+G  A+++F    
Sbjct: 330 TS----FQVRVSI-----VTGLDQLRSGMNADLVFLGSK 359



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 53/148 (35%), Gaps = 5/148 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS+SG ++     V I    +G + +  VE G ++ QG  +   +    +  I+ +    
Sbjct: 63  VSASGTVVPI-QTVNISPKTAGRLVQLLVEQGDRVRQGQIIARMD----SSDIEAQLAQA 117

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +         ++ +   N   ++ +   +    Q    L     T ++      +     
Sbjct: 118 QANLAEAQARQAEILAGNRAQEIAQAQAQVNAAQARVDLTSGRVTRNRPLAEEGAISRDR 177

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           L   +    S   N  + + + +LLRA 
Sbjct: 178 LDEVIADDNSARANLREAQQRLNLLRAG 205


>gi|16331157|ref|NP_441885.1| hypothetical protein sll0141 [Synechocystis sp. PCC 6803]
 gi|1653651|dbj|BAA18563.1| sll0141 [Synechocystis sp. PCC 6803]
          Length = 467

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 86/268 (32%), Gaps = 9/268 (3%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           D  +        + D+L  A +  + + +    +  +  S+V +  I  V ++       
Sbjct: 95  DRVRGEEILAEIEDDLLLGAVDQAKAEKMAQRSEVLTAQSQVGDAQIR-VEQARLQLQQA 153

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
              I      L  +    R  +   Q D    + L E+ A       Q E    ++   L
Sbjct: 154 QADIIRLETSLNARIEQARLEVDQTQADAARFRLLAEEGAGGAQQAEQAETRARQAKEIL 213

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTR 287
           R         L         A+    + + ++  + ++          + + +   +  +
Sbjct: 214 RNEQASASQQLSQAKTAAKTASQILNSAIAQVQIEQQRVGAATAQMNAQRASIEQAQTRQ 273

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           +  T+ +P  G ++  +     N  Q    ++++    +   I  +V+  Q+  +     
Sbjct: 274 QYATVRAPFPGRVLR-RLSEPGNLVQPGTEILQLG-DFRQLEIDVQVSELQLAQIALQQK 331

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIIS 375
             V+   +       F  ++ +I P   
Sbjct: 332 VNVKLDAFPGQT---FTGVVTRISPQAD 356


>gi|332885717|gb|EGK05963.1| hypothetical protein HMPREF9456_02227 [Dysgonomonas mossii DSM
           22836]
          Length = 360

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 62/211 (29%), Gaps = 19/211 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +S +D+  +   V     E        +        L ++ ++     L+ ++       
Sbjct: 91  ISSDDILAKRAQVQAMITEAEAAAKNAQRDYERFKTLRNQNSVSDKE-LENVALQNTSMN 149

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                   ++  +        I +P +G +   +     + A    P++ I   +    +
Sbjct: 150 AKVQMARQQMNEVNAMLSYTNIRAPFSGVVTQ-KMIDEGSMANPGMPILTI-EQNGELQV 207

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A +    IQ+VK G  A +                + ++ P   +          Y + 
Sbjct: 208 TASIPENYIQYVKVGDVAKMEL----KSLGITIDGKVSELSPSAFRTGGQ------YSMK 257

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF--TAKN 419
           L I     + +   +R G    +L       
Sbjct: 258 LAID----TKDKENIRPGMYVNILIPNKTGE 284



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 34/101 (33%), Gaps = 2/101 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K  V+ G ++  G  L++    +   L    +V           + +  D+   K 
Sbjct: 69  GYVTKIYVKPGDKVASGQLLVSISSDDI--LAKRAQVQAMITEAEAAAKNAQRDYERFKT 126

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
              + +   +E + +       +   ++    ++ V   L 
Sbjct: 127 LRNQNSVSDKELENVALQNTSMNAKVQMARQQMNEVNAMLS 167


>gi|332526595|ref|ZP_08402703.1| hypothetical protein RBXJA2T_11947 [Rubrivivax benzoatilyticus JA2]
 gi|332110859|gb|EGJ11036.1| hypothetical protein RBXJA2T_11947 [Rubrivivax benzoatilyticus JA2]
          Length = 826

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 95/279 (34%), Gaps = 22/279 (7%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              ++V +  + +  ++   ++   R++     DL+++       L+  + ++   +  F
Sbjct: 550 QVIARVASTDLKAQLQTFDARIAAQRAVV---ADLKSRPRKEEVALAQSELEIARQRARF 606

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
               V + +   QER +  S  EL     E +   R + +      L  A    +    +
Sbjct: 607 SGERVPRLERMHQERTI--SFEELDSARKEAEVDRRELAQREAALALVRAGTPPD---RI 661

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHS 325
              + T    + +   +E    +  +  P  GTI+  +     ++   +  P    V  +
Sbjct: 662 AAEEATLQSLVQQRAEVEGRAGRTVMTMPFDGTILSLRLKDRLNSVLDKGAPFAT-VEAN 720

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               +   V   +I HVK G    VR   + D     F+  +E+ID  +S +        
Sbjct: 721 GSMTVEIDVPEGEIGHVKVGAPVRVRPNAFNDRT---FEGRVERIDGNVSVKPAG----- 772

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
                +        +    L++G        A    + Q
Sbjct: 773 ----RVVKVVAVVDNGGGALKSGMTGYAKVDAGTMPVWQ 807


>gi|300693762|ref|YP_003749735.1| multidrug resistance homolog transmembrane protein (emra)
           [Ralstonia solanacearum PSI07]
 gi|299075799|emb|CBJ35107.1| putative multidrug resistance homolog transmembrane protein (emrA)
           [Ralstonia solanacearum PSI07]
          Length = 370

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 97/327 (29%), Gaps = 28/327 (8%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                 +      ++       S +     + DV +         L     +     +  
Sbjct: 30  ESEASEQSTDDAYVQADFTVIVSQVAGTIIRVDVADHQEVRAGAPLASIDDRDLRIAADN 89

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               I+S   ++     ++              +   A L   + + +   NL    + +
Sbjct: 90  AKAHIASAQATIDGLQAQIARQLSTIEQARAAVAATGANLKLAEANRSRFANLARDGSGT 149

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
                Q E            ++    +  +    L                 DLE+ +  
Sbjct: 150 VQAQQQAEAQWDIQRAARERDLAGLHSAEQQTAIL---------------RADLEKARAN 194

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                ++    +       + +P++G +V  +S     YA+  QPL+ +VP     Y+ A
Sbjct: 195 LLSAQAEKATADLNLSYARVTAPVSG-VVAQRSARVGGYARVGQPLLTLVPLD-AVYVEA 252

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYE 388
                Q+  V+ G   T+      +IR    +  +E + P      S    +  T  + +
Sbjct: 253 NFRETQLARVRAGQPVTITVDALPNIR---LQGRVESLGPASGISFSTTPPHNATGNFTK 309

Query: 389 VI----LKITDLAFSDNNIELRNGFPA 411
           ++    ++I      +   +LR G   
Sbjct: 310 IVQRLPVRIRLEPGQEAARQLRVGMSV 336


>gi|242239889|ref|YP_002988070.1| secretion protein HlyD [Dickeya dadantii Ech703]
 gi|242131946|gb|ACS86248.1| secretion protein HlyD family protein [Dickeya dadantii Ech703]
          Length = 393

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 84/269 (31%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     SL   +  +R +Y    + + +    +  L     D    + L  K A+S  D
Sbjct: 96  ALQQSEASLAKTVREVRGLYSTVDNYQAQVVSRQVALQQAIGDYNRRRGLVAKGAISTED 155

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  V  +   L              +          A     +  D    +   AD
Sbjct: 156 LAHYQDAVNSARSAL--------------DAAEQSLRTNQAMVDNTVIDDHPDIKSAVAD 201

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             SK         + TI++P++G +   ++            LM IVP  +  ++ A   
Sbjct: 202 LRSKYL----DWARSTIVAPVSGYVAK-RAVQVGMRVSAGATLMSIVPL-EQVWVDANFK 255

Query: 336 PKQIQHVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPIISQQDNNLQTQEYY 387
             Q+Q ++ G + T+    Y D  +                 + P  +   N ++  +  
Sbjct: 256 ESQMQQMRLGQSVTLTADIYGDNAQYHGTIQSLGIGTGSAFSLLPAQNASGNWIKIVQRL 315

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + +   A   + + +     A V   
Sbjct: 316 PVRIALDPEALKQHPLRIGLSMQARVDLR 344



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 61/180 (33%), Gaps = 16/180 (8%)

Query: 14  PASLKR---MTLLSIIGIIGLITWSILLPIEISVS-SSGEILNEDNVVEIKSPFSGIIKK 69
           PA  +R     +L I+ ++    W       +    ++ +     N++ +    SG    
Sbjct: 11  PAPGRRKRQFAILFIVLLLAAAGWGAYYQFYLRFYEATDDAYVNGNLITLTPQISGTATT 70

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V++G  + +G  L+     +T        ++++     +      +  L +  D  + 
Sbjct: 71  VSVDDGDYVEKGQVLVQLSPSDT-------LIALQQSEASLAKTVREVRGLYSTVDNYQA 123

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              SR+  L   +G Y+     V    I     S +       ++   R  L+     LR
Sbjct: 124 QVVSRQVALQQAIGDYNRRRGLVAKGAI-----STEDLAHYQDAVNSARSALDAAEQSLR 178


>gi|71909529|ref|YP_287116.1| secretion protein HlyD [Dechloromonas aromatica RCB]
 gi|71849150|gb|AAZ48646.1| Secretion protein HlyD [Dechloromonas aromatica RCB]
          Length = 433

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 67/201 (33%), Gaps = 23/201 (11%)

Query: 231 RENIHEQKNMLRHINELYD--------EANLEFANYLKEIS-RDLEQNQRTFADEMSKLT 281
           +  + E    L  + ++ +        +  LE A+  ++ +   L   +       +   
Sbjct: 145 QATVAETTASLNRMRQVAELSGGKVPAKTELETADAARQRAIATLASARADVVQARATAK 204

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-SQPLMKIVPHS-KLTYIRAKVTPKQI 339
             E    + TI SP+ G ++  +           + P++ ++        ++ KV    +
Sbjct: 205 TDETNLGKATIRSPVDGVVLTRKVEPGQTVVAAMTTPVLFVLAEDLAKMELQVKVDEADV 264

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
            +VK G TA+     +   +       +                   Y+ IL++     +
Sbjct: 265 GNVKIGQTASFTVSAWPGRKFPASIQRVGLGSTTTDNVVT-------YKTILRV-----N 312

Query: 400 DNNIELRNGFPAEVLFTAKNT 420
           ++++ LR G  A       + 
Sbjct: 313 NDDLALRPGMTATAAIVTASR 333



 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 61/202 (30%), Gaps = 10/202 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           ++L  + ++ S+SG +      V++ S  SG +    V+    + +G  L   +  +  D
Sbjct: 67  AVLGNLLVTASASGTLQP-TKSVDVGSELSGTLASVLVQENDVVKKGQLLAQLDTAKLKD 125

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE------SREEQLLDFLGKYHST 148
            +   + ++      +   ++ +       + + +  E        + +L          
Sbjct: 126 AVAKSQAAVAAAEASVALAQATVAETTASLNRMRQVAELSGGKVPAKTELETADAARQRA 185

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            + + +     V      K               +   L R +         M   +   
Sbjct: 186 IATLASARADVVQARATAKTDETNLGKATIRSPVDGVVLTRKVEPGQTVVAAMTTPVL-- 243

Query: 209 NAVSQNDLNQQERIVYKSTLEL 230
             V   DL + E  V     ++
Sbjct: 244 -FVLAEDLAKMELQVKVDEADV 264


>gi|107022578|ref|YP_620905.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116689526|ref|YP_835149.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           HI2424]
 gi|170732830|ref|YP_001764777.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
 gi|254245582|ref|ZP_04938903.1| Secretion protein HlyD [Burkholderia cenocepacia PC184]
 gi|105892767|gb|ABF75932.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116647615|gb|ABK08256.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           HI2424]
 gi|124870358|gb|EAY62074.1| Secretion protein HlyD [Burkholderia cenocepacia PC184]
 gi|169816072|gb|ACA90655.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
          Length = 404

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 87/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 96  QVALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 155

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 156 EE------------------ISHARDAVKAAQASVDAAQQQLASNRALTANTTIASHPNV 197

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        +  + +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 198 MAAAAKVRDAYLANARNVLPAPVTGYVAK-RSVQVGQRVSPGNPLMSVVPLN-AVWVDAN 255

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 256 FKEVQLKHMRIGQPVELTADIYGSSVTYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 315

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++       + + +      +V   
Sbjct: 316 RLPVRIELDPKDLDKHPLRIGLSMQVDVDIK 346



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 55  VNGNVVQITPQVTGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L   L   +  +   +  ++   +V  +      
Sbjct: 115 GLFVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASVDA 174

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 175 AQQQLASNRALTAN 188


>gi|322378223|ref|ZP_08052707.1| competence factor transport protein ComB [Streptococcus sp. M334]
 gi|321280853|gb|EFX57869.1| competence factor transport protein ComB [Streptococcus sp. M334]
          Length = 449

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/438 (11%), Positives = 142/438 (32%), Gaps = 34/438 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R +     R+ +   + ++ L+ ++ +   E+S+S+   +     +  I+S  +  I   
Sbjct: 14  RRYHNFSSRVIVPMSLLLVFLLGFATVAEKEMSLSTRATVEPSRILASIQSTSNNRILVN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            +E    + +G  L+ +++       +     +  L+      K  L++L       E  
Sbjct: 74  HLEENKLVKKGELLVQYQEGAEGVQAEAYASQLDMLKDQ----KKQLEYLQKSLQEGENH 129

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           F   ++       + + + +       S    ++  +            +L +++     
Sbjct: 130 FPEEDKFGYQATFRDYLSQAGSLKASTSQQNETIASQNAAASQTQAEIGNLISQTEAKIR 189

Query: 191 LLSSHQKDLTMMKNLFEKNAV--------SQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              + +  +    +L  +N          SQ + N Q +    + +E + +  E      
Sbjct: 190 DYQTAKSAIETGASLANQNLAYSLYQSYKSQGEENPQAKAQAVAQVEAQLSQLESSLATY 249

Query: 243 HINELYDEANLEFA------------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            I          +A             +L ++ ++L    +   +  S   +     ++ 
Sbjct: 250 RIQYAGSGTQQSYASGLSSQLESLKSQHLAKVGQELTLLDQKILEVASGKKVQGNLLDKG 309

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYT 347
            I +   G +  N   S S    +   L ++ P         + A ++ K I  +K G +
Sbjct: 310 KITASEDGVLHLNPETSDSTMVAEGTLLAQLYPSLEKEGKAKLTAYLSSKDIARIKVGDS 369

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
                  +    +    + I  ID   ++ +       ++++  +      S+   +LR 
Sbjct: 370 VRYT-TTHDSKNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLRY 422

Query: 408 GFPAEVLFTAKNTTLAQE 425
           G    +       +  + 
Sbjct: 423 GVEGRLQMITGKKSYLRY 440


>gi|293371124|ref|ZP_06617661.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CMC 3f]
 gi|292633782|gb|EFF52334.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CMC 3f]
          Length = 344

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 58/384 (15%), Positives = 118/384 (30%), Gaps = 89/384 (23%)

Query: 48  GEILNEDNVVEIKSPFS------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           G I   DN    +          G IKK   +   Q+ +G  LL  ED E          
Sbjct: 34  GNIEYTDNAQVKQHITPINTRVPGFIKKIYFDEYQQVRKGDTLLIIEDAEF--------- 84

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                   +   ++  D  N                                    +   
Sbjct: 85  -------RLRVAQAEADLAN----------------------------------ATAGRQ 103

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +     T   ++ ++   +E     +R  + + +++L   + L +++AV++   +    
Sbjct: 104 ATTIGIATTQNNLSVSDASIEE----VRVQMENAKRELNRFEKLLQEDAVTKQQYD---- 155

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                      N+H      +   E    A +  +    E +  L QN+       + L 
Sbjct: 156 -----------NVHTAYEAAKARYEQVSRAKMSTSLVKSEQTHRLGQNEAGVRLAEAALE 204

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +         I++P  GT    +        Q  Q ++ IV  S   ++ A     Q+ +
Sbjct: 205 LARLNLSYTVIIAPCDGT-TGKKEILEGQLVQPGQTMVDIV-DSSDLWVIANYRETQLPN 262

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKID----PIISQQDNNLQTQEYYEVI----LKI 393
           +K+G    +      ++    FK ++E I        S    +  T  + +V     ++I
Sbjct: 263 IKEGAEVEITADAVPNVT---FKGVVESISDATGAAFSMISQDNATGNFVKVEQRIPVRI 319

Query: 394 TDLAFSDNNI-ELRNGFPAEVLFT 416
           +       ++  +R GF  E    
Sbjct: 320 SLKGNKPEDLKRMRAGFNVECEVK 343


>gi|172065548|ref|YP_001816260.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
 gi|171997790|gb|ACB68707.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
          Length = 460

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/412 (12%), Positives = 126/412 (30%), Gaps = 82/412 (19%)

Query: 10  KRNHPASLKRMTLLSIIGII-GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           KR     L  +  ++++ +I GL+ W      E +  +      + N V +    SG + 
Sbjct: 116 KRPGKKPLIILGAVAVVLVIAGLVWWLATRNQESTDDAY----TDGNAVAVAPHVSGYVT 171

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V++ + + +G  L+  +  +    +D         R  +   ++ LD    + D   
Sbjct: 172 RLAVDDNTYVHRGDVLVEIDPRDYRAQVD-------AARAQLGLAQAQLDASRVQLD--- 221

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                  + +    + Y+  + ++    + Y   L  + +   +
Sbjct: 222 -----------------------IAHVQFPAQYKQARAQIESAEAAYRQALAAQERQRAV 258

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A  +S Q                  D    +R    + + + +      +++       
Sbjct: 259 DARATSQQ----------------AIDAADAQRASADANVAMAQAQARTASLVPQ----- 297

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                     +++    +E+ ++      ++L           + +P  G +        
Sbjct: 298 ---------QIRQAETAVEERRQQVLAARAQLDTANLNLSYCEVRAPSDGWVTRRNV-QL 347

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +Y Q    +  +V  +   +I A     Q++ ++ G    V    Y D+        ++
Sbjct: 348 GSYLQAGASVFSVV--TPRVWITANFKESQLERMRIGDRVDVSVDAYPDL---DLHGHVD 402

Query: 369 KI--------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
            I            ++       +    V +KI       NN  L  G  AE
Sbjct: 403 SIQLGSGARFSAFPAENATGNFVKIVQRVPVKIVLDGPLPNNPPLGLGLSAE 454


>gi|237720192|ref|ZP_04550673.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|299148049|ref|ZP_07041112.1| putative multidrug resistance protein [Bacteroides sp. 3_1_23]
 gi|229450744|gb|EEO56535.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|298514232|gb|EFI38118.1| putative multidrug resistance protein [Bacteroides sp. 3_1_23]
          Length = 344

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 58/384 (15%), Positives = 118/384 (30%), Gaps = 89/384 (23%)

Query: 48  GEILNEDNVVEIKSPFS------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           G I   DN    +          G IKK   +   Q+ +G  LL  ED E          
Sbjct: 34  GNIEYTDNAQVKQHITPINTRVPGFIKKIYFDEYQQVRKGDTLLIIEDAEF--------- 84

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                   +   ++  D  N                                    +   
Sbjct: 85  -------RLRVAQAEADLAN----------------------------------ATAGRQ 103

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +     T   ++ ++   +E     +R  + + +++L   + L +++AV++   +    
Sbjct: 104 ATTIGIATTQNNLSVSDASIEE----VRVQMENAKRELNRFEKLLQEDAVTKQQYD---- 155

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                      N+H      +   E    A +  +    E +  L QN+       + L 
Sbjct: 156 -----------NVHTAYEAAKARYEQVSRAKMSTSLVKSEQTHRLGQNEAGVRLAEAALE 204

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +         I++P  GT    +        Q  Q ++ IV  S   ++ A     Q+ +
Sbjct: 205 LARLNLSYTVIIAPCDGT-TGKKEILEGQLVQPGQTMVDIV-DSSDLWVIANYRETQLPN 262

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKID----PIISQQDNNLQTQEYYEVI----LKI 393
           +K+G    +      ++    FK ++E I        S    +  T  + +V     ++I
Sbjct: 263 IKEGAEVEITADAVPNVT---FKGVVESISDATGAAFSMIPQDNATGNFVKVEQRIPVRI 319

Query: 394 TDLAFSDNNI-ELRNGFPAEVLFT 416
           +       ++  +R GF  E    
Sbjct: 320 SLKGNKPEDLKRMRAGFNVECEVK 343


>gi|210633457|ref|ZP_03297782.1| hypothetical protein COLSTE_01695 [Collinsella stercoris DSM 13279]
 gi|210159143|gb|EEA90114.1| hypothetical protein COLSTE_01695 [Collinsella stercoris DSM 13279]
          Length = 493

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 81/236 (34%), Gaps = 27/236 (11%)

Query: 204 NLFEKNAVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           N+    AV++ D+         +R V ++   LR+   E  +  + + +   +A +   +
Sbjct: 164 NVVAGQAVNEGDVLMTIKNPDLDRAVAEADRALRQAKSELGSAQQALKDAKAQAAVPQQD 223

Query: 258 Y---LKEISRDLEQNQRTFADEMSKLTILEKTREQ---KTILSPIAGTIVYNQSF----- 306
                 ++S   +      A   S     +    +   +T+ +P AG++V   +      
Sbjct: 224 GSMPAVDVSSAQQAVNAAQAAVESAQAAYDDAVAKAALRTVKAPAAGSVVALNAQVGTDL 283

Query: 307 --SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKF 363
             +         PLM+I        +  +V  + I  V    TAT+  P +   +   + 
Sbjct: 284 SDNMGGSGATG-PLMQIA-DLSKMKVTIQVDEQDIASVAVDQTATITCPAFADLVLTGRV 341

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            AI        S    +      + V + I        +  L+ G  AEV  T + 
Sbjct: 342 TAIASIASTDSSSMSYDGMGSPTFAVDILIDAP-----DARLKPGMTAEVSLTTQQ 392



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 38/95 (40%), Gaps = 1/95 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           ++L      V + G +    +   I    +G ++   V  G  + +G  L+T ++ +   
Sbjct: 129 AMLGTFSTVVDAKGTLQPLSST-IITPEVTGQVESINVVAGQAVNEGDVLMTIKNPDLDR 187

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            +     +++  +  + + + AL     +  V ++
Sbjct: 188 AVAEADRALRQAKSELGSAQQALKDAKAQAAVPQQ 222


>gi|119357467|ref|YP_912111.1| RND family efflux transporter MFP subunit [Chlorobium
           phaeobacteroides DSM 266]
 gi|119354816|gb|ABL65687.1| efflux transporter, RND family, MFP subunit [Chlorobium
           phaeobacteroides DSM 266]
          Length = 418

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 89/233 (38%), Gaps = 23/233 (9%)

Query: 210 AVSQNDLNQQERIVYKST-LELRENIHEQKNMLRHINELYDEANLEFANYL------KEI 262
            ++Q + +Q +    KS  LE      + ++  R  N L+ E  +   +Y+      +  
Sbjct: 101 YINQVEQSQAQLNQAKSQSLEAGSRKLKAEDDFRKANLLFREKLISETDYMTAKTNVQAA 160

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPL 318
               E +        S L +     ++  + +PI+G+IV   S S              +
Sbjct: 161 RASYESSLYAIQQNKSLLDLNNDRMKKTVVSAPISGSIVALNSKSGERVVGTGQFPGTEV 220

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-PIISQQ 377
           +++  +     +  +V    I +VKKG   +V    Y D     FK ++ +I    ++Q 
Sbjct: 221 LRLA-NLDSMQVSVEVNENDIVNVKKGDPVSVTVDAYGDRI---FKGVVHEISNSALAQA 276

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
             + +    + V ++I      ++N  L+ G  A          +A  ++ PI
Sbjct: 277 VGSQEEVTNFSVKIRI-----LNHNRLLKPGMSATADIETDR--VANALVVPI 322



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 68/177 (38%), Gaps = 23/177 (12%)

Query: 9   LKRNHPASLKRMTLLSIIGI----IGLITWSIL--LPIEIS------------VSSSGEI 50
           + +  P+  +   + ++ GI      L TW +L   P+E++            V+++G+I
Sbjct: 1   MSKKKPSQKRNTIIFALTGILVAGGILFTWMMLREKPLEVTTEKAFRKDVIHLVTATGKI 60

Query: 51  LNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
             E  +    SP  SG I +  V+ G Q+L G  L   +     + ++  +  +   +  
Sbjct: 61  EPE--IEVAMSPDVSGEIIELPVKEGDQVLMGALLFKIQPDVYINQVEQSQAQLNQAKSQ 118

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             + ++    L  + D  +     RE+ + +       T  +       S   +++ 
Sbjct: 119 --SLEAGSRKLKAEDDFRKANLLFREKLISETDYMTAKTNVQAARASYESSLYAIQQ 173


>gi|307705082|ref|ZP_07641962.1| transport protein comB [Streptococcus mitis SK597]
 gi|307621342|gb|EFO00399.1| transport protein comB [Streptococcus mitis SK597]
          Length = 449

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/434 (12%), Positives = 151/434 (34%), Gaps = 26/434 (5%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R +     R+ +   + ++ L+ ++I    EIS+S+   +     +  I+S  +  I   
Sbjct: 14  RRYHNFSSRVIVPMSLLLVFLLGFAIFAEKEISLSTRATVEPSRILANIQSTSNNRILVN 73

Query: 71  QVENGSQILQGTPLLTF----EDIETT------DLIDLKKVSIKNLRCHI-DTEKSALDF 119
            +E    + +G  L+ +    E ++        D++  +K  ++ L+  + + E    + 
Sbjct: 74  HLEENKLVKKGELLVQYQEGAEGVQAESYASQLDMLKDQKKQLEYLQKSLQEGENHFPEE 133

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHST---CSKVFNYGISSVYRSLKMKLTRMRSIYL 176
               Y    + + S+   L     + + T    +   +   + +   +     ++R    
Sbjct: 134 DKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKIRDYQT 193

Query: 177 NRLDLENKSSLLRALLS--SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            +  +E  +SL    L+   +Q   +  +   +  A + + +  Q   +  S    R   
Sbjct: 194 AKSAIETGASLASQNLAYSLYQSYKSQGEENSQAKAQAISQVEAQLSQLESSLATYRVQY 253

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                   + + L  +     + +L ++ ++L    +   +  S   +     ++  I +
Sbjct: 254 AGSGAQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGRKVQGNLLDKGKITA 313

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVR 351
              G +  N   S S    +   L ++ P         + A ++ K +  +K G +    
Sbjct: 314 SEDGVLHLNPETSDSTMVAEGALLAQLYPSLEKEGKAKLTAYLSSKDVARIKVGDSVRYT 373

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              +    +    + I  ID   ++ +       ++++  +      S+   +LR G   
Sbjct: 374 -TTHDAKNQLFLDSTITGIDATATKTEKG----NFFKIEAETN--LTSEQAEKLRYGVEG 426

Query: 412 EVLFTAKNTTLAQE 425
            +       +  + 
Sbjct: 427 RLQMITGKKSYLRY 440


>gi|206889619|ref|YP_002249207.1| secretion protein HlyD [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741557|gb|ACI20614.1| secretion protein HlyD [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 423

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 68/233 (29%), Gaps = 35/233 (15%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--------------- 253
             +++ D ++ E  + ++   L     +Q      ++E   +                  
Sbjct: 105 QILAKIDTSKLEAQLAQAEASLESAKAKQLQAQATVDEALLKLKQLQKVKELSGGKMPSQ 164

Query: 254 ----EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                     +    +L   + +  +  +K+   +    +  I SPI G ++        
Sbjct: 165 TEMDSAEASYRRALAELASAKASIMEAQAKIKEYKTEISKSFIRSPIRGIVLKRNV-EPG 223

Query: 310 NYAQQ---SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                   +  L  I        +   +    +  +K+G  AT +   Y +     F   
Sbjct: 224 QTVAATLEAPELFTIAEDLTKMELHLNIDEADVGKIKEGQRATFKVDAYPEQT---FDGK 280

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + ++        N +     Y  IL++++         LR G  A      K 
Sbjct: 281 VIQVRYASKTVSNVVT----YTAILEVSNPELL-----LRPGMTATADILVKE 324



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 56/156 (35%), Gaps = 14/156 (8%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             + + V+++G +  +   V + S  SGIIK   V    ++  G  L   +  +    + 
Sbjct: 62  GNLTVMVTATGTLEAK-KTVTVGSELSGIIKTVYVTYNDRVKAGQILAKIDTSKLEAQLA 120

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S+++ +      ++ +D    K   L+K              K  S         +
Sbjct: 121 QAEASLESAKAKQLQAQATVDEALLKLKQLQKV-------------KELSGGKMPSQTEM 167

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            S   S +  L  + S   + ++ + K    +  +S
Sbjct: 168 DSAEASYRRALAELASAKASIMEAQAKIKEYKTEIS 203


>gi|197103293|ref|YP_002128671.1| heavy metal efflux system, membrane fusion protein
           [Phenylobacterium zucineum HLK1]
 gi|196480569|gb|ACG80096.1| heavy metal efflux system, membrane fusion protein
           [Phenylobacterium zucineum HLK1]
          Length = 342

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 82/245 (33%), Gaps = 23/245 (9%)

Query: 184 KSSLLRALLSSHQKDLTMMK--------NLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           K+  L A L +   +L  ++         L       Q ++ +      +S L+  E + 
Sbjct: 91  KAGQLVAQLDAGDYELQALRAGAQRSAAELAAAQVGPQLNVARHHAQTARSDLQRFETLA 150

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
               +     +L   +    A  ++ +S    +           L +      +  I +P
Sbjct: 151 PAGAVSAREVDLQRNSYQAAAEQVRALSAQRSEALAQAEVASHSLALARSQIAKTRIYAP 210

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           I+G ++  +           Q +  +        +R  ++ + +  ++ G    +R   +
Sbjct: 211 ISGAVLE-RLAEPGEVIGAGQAVAVMA-DLARVKLRVFISERDLGKIRLGAPVRLRVDAF 268

Query: 356 ADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
                  F+A + +ID             + +++  Y V ++    A +   + L+ G P
Sbjct: 269 PGRY---FEARVARIDAQAQFTPRDVHMADERSRTVYGVTVE----AANPEGL-LKPGMP 320

Query: 411 AEVLF 415
           A+   
Sbjct: 321 ADAWI 325



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/212 (8%), Positives = 67/212 (31%), Gaps = 23/212 (10%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPI----------EISVSSSGEIL 51
            +     ++R+     +R++ +  +G++ L   +    +          +  +  SG I 
Sbjct: 8   RNLGQSYVERSVGLPARRISYIVALGLVVLA--AGSAGLYWTLKPRPLPDQVIYGSGRIE 65

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            ++  + ++ P  G + +     G  +  G  +   +              ++ LR    
Sbjct: 66  ADEVRIGVEVP--GRLVENAAVEGQTLKAGQLVAQLD---------AGDYELQALRAGAQ 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              + L        +      ++  +      +  +    V    +     S +    ++
Sbjct: 115 RSAAELAAAQVGPQLNVARHHAQTARSDLQRFETLAPAGAVSAREVDLQRNSYQAAAEQV 174

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           R++   R +   ++ +    L+  +  +   +
Sbjct: 175 RALSAQRSEALAQAEVASHSLALARSQIAKTR 206


>gi|152984272|ref|YP_001351215.1| multidrug resistance protein [Pseudomonas aeruginosa PA7]
 gi|150959430|gb|ABR81455.1| multidrug resistance protein [Pseudomonas aeruginosa PA7]
          Length = 400

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 87/269 (32%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + ++R ++ N      + +  +  L+  + D    KNL +  A+SQ +
Sbjct: 101 ALQRAEANLAHTVRQVRGLFSNVDGYRAEVATRKVALAKAEADYRRRKNLADDGAISQEE 160

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   L  +    +  L     L D+  +     +K  +  L Q     A 
Sbjct: 161 LAHARDALDSAKASLTSS----EQQLNTNRALVDDTQITSHPDVKAAAAQLRQAYLDDA- 215

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        + TI++P+ G +   +S       Q    LM +VP  +  +I A   
Sbjct: 216 -------------RSTIVAPVTGYVAK-RSVQVGQRVQPGNALMAVVPL-EQIWIDANFK 260

Query: 336 PKQIQHVKKGYTATVRFPHY--ADIREKKFKAI-IEKIDPIISQQDNNLQTQ-----EYY 387
             Q++H++ G    +R   Y           ++ +            N         +  
Sbjct: 261 ETQLKHMRIGQPVEIRSDLYGSDVRYSGTVDSLGVGTGSAFSLLPAQNATGNWIKIVQRV 320

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + I       + + +      +V   
Sbjct: 321 PVRIHIDPEELQKHPLRIGLSMDVKVDLH 349



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            NVV+I     G +     ++G  + +G  L+ F+  +         ++++    ++   
Sbjct: 60  GNVVQITPQIVGTVVSIGADDGDLVRKGQELVRFDPSDAD-------IALQRAEANLAHT 112

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              +  L +  D       +R+  L      Y    +   +  IS     L      + S
Sbjct: 113 VRQVRGLFSNVDGYRAEVATRKVALAKAEADYRRRKNLADDGAISQ--EELAHARDALDS 170

Query: 174 IYLNRLDLENKSSLLRALLSSHQ 196
              +    E + +  RAL+   Q
Sbjct: 171 AKASLTSSEQQLNTNRALVDDTQ 193


>gi|32470772|ref|NP_863765.1| membrane-fusion protein [Rhodopirellula baltica SH 1]
 gi|32442917|emb|CAD71436.1| probable membrane-fusion protein [Rhodopirellula baltica SH 1]
          Length = 484

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/343 (11%), Positives = 109/343 (31%), Gaps = 35/343 (10%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFESREEQLLDFL 142
           ++    E T             R  + ++ S     F  +  + +E      +  + +  
Sbjct: 84  VSVTPTEVTRTSVQPATVHAYYRAELRSQASGYVESFTADIGEYVESGTVLAKISVPERQ 143

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRM--RSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            +     +K+            +++L +   +S        +++   + A +++   +  
Sbjct: 144 QQRRVMEAKIRRSESQEKQAESQVELAQASKKSAEAKLAQAKSEVDAVEASVAAANAEFN 203

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             ++L  + ++ QN +  + R        ++ +    +           +A++E A+   
Sbjct: 204 RTEDLVSRGSL-QNRMLDEAR--------MKRDSESARKQAVQSAVASAQADVEVASARV 254

Query: 261 E-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ----- 314
           E    DLE  +        +L  L+   +   I +P +G I   ++    +  +      
Sbjct: 255 ESARADLETARAETDVVRRELDELDAWIDYAEIKAPFSGIITE-RNIEPGDLVRAANEVG 313

Query: 315 -SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             +PL  I        ++  V       V  G   ++ FP +A   E    A + +    
Sbjct: 314 LGKPLFVIS-QIDRVRVQIPVPENHAPLVSPGDEVSLTFPSFAS--EPSITAQVTRRSGS 370

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +  Q   +             ++   + + +L  G   +    
Sbjct: 371 LDAQTRTMMV-----------EVEMDNPDGKLIPGMFGQATIQ 402


>gi|295697287|ref|YP_003590525.1| efflux transporter, RND family, MFP subunit [Bacillus tusciae DSM
           2912]
 gi|295412889|gb|ADG07381.1| efflux transporter, RND family, MFP subunit [Bacillus tusciae DSM
           2912]
          Length = 433

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 84/244 (34%), Gaps = 34/244 (13%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                 +         + + + +L   K LFE   VS   L + E + ++  L +     
Sbjct: 151 EEITAAKENVRQAEIAVEAARTNLERTKKLFENGVVS---LKESENVQHEYDLAMSRLAA 207

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            ++N+L        EA       +     +L + + ++   +SK       R    ++SP
Sbjct: 208 AEQNLLLLKRSPTPEA-------VAVAEAELNKARTSYHTALSK-------RNDARVISP 253

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           ++G I          +     P   I  +    +I  +V+   I  V+ G   TV+FP  
Sbjct: 254 VSGYISGL-VIQEGEFLAAGTPFAVI-ENPNAFHITVRVSESDIHFVRLGDNVTVKFPTL 311

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                     +++++ P    +             L    L   +++ +++ G  A V+ 
Sbjct: 312 QLSTT----GVVDEVSPSADPRTG-----------LFPVKLTIENHDGQVKPGMVANVII 356

Query: 416 TAKN 419
             + 
Sbjct: 357 PLER 360


>gi|170079146|ref|YP_001735784.1| RND family efflux transporter MFP subunit [Synechococcus sp. PCC
           7002]
 gi|169886815|gb|ACB00529.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7002]
          Length = 474

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 99/326 (30%), Gaps = 49/326 (15%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + + ++G +    +V  I     G + +  VE G  + +G  L   ++ E        
Sbjct: 57  LAVRIEANGIVEPIQSV-NISPKTPGRLAQLLVEQGDVVTEGQELAIMDNSELYAEGIRA 115

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +   K     +   ++ +                 + ++ +   +Y  T +++       
Sbjct: 116 ESLTKQRIAELRATETRI-----------------QGEIEEARARYIRTQAQLQQAE--- 155

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                       + I         + +  +A L   Q  +   + L +  A++Q   +  
Sbjct: 156 ------------QRIPKEIDQANAQLAAAQANLQRTQDKVERFETLLDSGAIAQETYDDV 203

Query: 220 ERIVYKSTL---ELRENIHEQKNM----LRHINELYDEANLEFANYLKEISRDLEQNQRT 272
                 ++    E ++ + + +N     L  +     EA        +     L Q    
Sbjct: 204 RNEFDNASARFFEAQQRLAQVRNTANPELEALTAATVEARASLDRLERNAEPQLTQLTAA 263

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPH 324
                ++  I     +   I +P  G I   +  +   +           S     I+  
Sbjct: 264 LEQAQAQRQIAAVQFQDSIIRAPFDGVITQ-KFATEGAFVTPTTAASSTASATSSSILAL 322

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATV 350
           ++   + A+V    IQ ++ G    +
Sbjct: 323 ARGLEVVARVPEVDIQQIEPGQDVEI 348


>gi|134291286|ref|YP_001115055.1| secretion protein HlyD family protein [Burkholderia vietnamiensis
           G4]
 gi|134134475|gb|ABO58800.1| secretion protein HlyD family protein [Burkholderia vietnamiensis
           G4]
          Length = 437

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/363 (11%), Positives = 107/363 (29%), Gaps = 72/363 (19%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  +  + ++ +I  + W  L   +   +       + N V +    SG +
Sbjct: 91  ERKRPGKKPLIILGAVLLVLLIAGLVW-WLATRDQESTDDAY--TDGNAVAMAPHVSGYV 147

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V++ + + +G  L+  +  +    +D  +  +   +  +D  +  LD         
Sbjct: 148 TRLAVDDNTFVHRGDVLVEIDPRDYRARVDAARAQLGLAQAQLDAARVQLD--------- 198

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                                   +      + YR  + ++    + Y   L  + +   
Sbjct: 199 ------------------------IARVQYPAQYRQARAQIESADAAYRQALAAQERQRA 234

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           + A  +S Q                  D    +R    + + +        +++      
Sbjct: 235 VDARATSQQ----------------AIDAADAQRASADANVAMARAQARTASLVPQ---Q 275

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +A        +++ +             ++L   E       + +P  G +       
Sbjct: 276 IRQAETVVEERRQQVLQA-----------RAQLATAELDLSYCELRAPSDGWVTRRNV-Q 323

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             +Y Q    +  IV  +   +I A     Q++ ++ G    V    Y D+        +
Sbjct: 324 LGSYLQAGASVFSIV--TPQMWITANFKESQLERMRIGDRVDVSVDAYPDL---DLHGHV 378

Query: 368 EKI 370
           + I
Sbjct: 379 DSI 381


>gi|91975948|ref|YP_568607.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5]
 gi|91682404|gb|ABE38706.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5]
          Length = 421

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 57/383 (14%), Positives = 105/383 (27%), Gaps = 96/383 (25%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  +V +SG I      VEI S  +G +    V  G ++ +G  L+            
Sbjct: 62  GNLVQTVVASGHIETP-YRVEIGSQITGTVADVLVREGQEVREGQKLVAI---------- 110

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                          E S L     + +      E+R  QL            ++     
Sbjct: 111 ---------------EASELQAAMVQAEGAVAQAEARVRQL-----------RELTKPAA 144

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
               +     L    + Y     L       +A L    K+L           V++  + 
Sbjct: 145 DQALQQAHANLLNAEAAYERASKLAASGYGTKATLDDATKNLD----------VARTQVR 194

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             E  VY S+                                  +  D    +       
Sbjct: 195 TAELQVYTSSP---------------------------------VGSDYVMAETLLGQAR 221

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + L          +I++P  G ++  +     +  Q  + L+ + P      +  ++  K
Sbjct: 222 ANLNTARARLGYASIVAPRDG-VLITRKVERGSVVQPGKALLVLAPAGDSQIV-VQIDEK 279

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  +  G +A      Y D   K+F A +  I+P +                ++I  LA
Sbjct: 280 NLGQLALGQSALASADAYPD---KRFAARLSYINPSVDIN----------RASVEI-KLA 325

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
            +D    LR      V       
Sbjct: 326 VTDPPNYLRQDMTVSVDIATARR 348


>gi|327390457|gb|EGE88797.1| bacteriocin secretion accessory family protein [Streptococcus
           pneumoniae GA04375]
          Length = 449

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/439 (11%), Positives = 147/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L N++    
Sbjct: 129 RFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLINQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV------SQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               + Q  +    +L  +N         ++   +  +   ++  ++   I + ++ L  
Sbjct: 189 RDYQTAQSAMETGASLASQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 244 INELYDEANLEFA--------------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               Y  +  + A               +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|262173958|ref|ZP_06041635.1| hypothetical protein VII_001048 [Vibrio mimicus MB-451]
 gi|261891316|gb|EEY37303.1| hypothetical protein VII_001048 [Vibrio mimicus MB-451]
          Length = 344

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 105/299 (35%), Gaps = 27/299 (9%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           + +   V++ A E     L    G+  +    +F     ++   L      +  + +N+ 
Sbjct: 66  VTSDPVVIKAAEEGVVGSLNLVTGQSVTEQQALFEIVNDALSGELDFIRQEIAQLNVNQE 125

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFE----KNAVSQNDLNQQERIVYKSTLELRENIH 235
           +  +  +L       +   +  ++  +E    K  VS  D      + Y +  EL     
Sbjct: 126 ESFDYHTLTIENAQKNADQIQQIRKRYEFYKAKGQVSDVDYAAIINLAYSAQNELNSRHI 185

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
              +   +  E             + ++  + Q +R+    M +L + +   +Q  + SP
Sbjct: 186 ALDDAQNNYQE-------------RRLAGPISQARRSL---MKELVVKQTQLDQLNVRSP 229

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G +V           ++  P+M I   + + ++ A + PK +   + G  A V+FP  
Sbjct: 230 YDGRVVDIPVV-EGQQVEKGDPVMVIA-KNVMPHVTAYLNPKYLDIAQFGNKAKVKFPD- 286

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYY-EVILKITDLAFSDNNIELRNGFPAEV 413
                      +E +  + +Q     + Q  Y +V L   +    +  IE   G   EV
Sbjct: 287 GKTYSATVSQAVEIVSKLPTQLTKPFEGQPAYMKVTLAFDEEVGQNRWIE---GMTVEV 342



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 71/218 (32%), Gaps = 14/218 (6%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
             M+   KR        + L  +I  ++ +  +     + +   +    +   + V IK+
Sbjct: 20  KVMYGQAKRGGYRLRWYLILALVISPLLAMGYYLYRDKVLVIAPA----IVTSDPVVIKA 75

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G++    +  G  + +   L    +   +  +D  +  I  L  + +          
Sbjct: 76  AEEGVVGSLNLVTGQSVTEQQALFEIVNDALSGELDFIRQEIAQLNVNQEESFDYHTL-- 133

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               +      + + Q +    +++    +V +   +++          + S ++   D 
Sbjct: 134 ---TIENAQKNADQIQQIRKRYEFYKAKGQVSDVDYAAIINLAYSAQNELNSRHIALDDA 190

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +N     R      Q   ++MK L     V Q  L+Q 
Sbjct: 191 QNNYQERRLAGPISQARRSLMKELV----VKQTQLDQL 224


>gi|317502622|ref|ZP_07960742.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315666241|gb|EFV05788.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 296

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 84/244 (34%), Gaps = 39/244 (15%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              + +   + + LR  +   Q+D+     L +  A ++  L+     +     +L    
Sbjct: 85  QAQKPNASTQVAALRQQIVKAQEDVKRYAELVKDGAANRKILDDSRNQLLVLQRQLAAQN 144

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               N  R ++     A++E    +                             +  I S
Sbjct: 145 STLGNSTRSLSAQMGTADVEKLQVI-------------------------DQLRKCHITS 179

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           PI+G ++  +      +    +PL K V   +  Y+RA +T +Q+  VK G   TV F  
Sbjct: 180 PISGNVLE-KYAEQGEFVMTGKPLFK-VADIQRLYLRAYITSQQLSKVKLGQRVTV-FSD 236

Query: 355 YADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           Y +   K ++ ++  I             N+ +    Y + + +       N+  ++ G 
Sbjct: 237 YGNNLRKSYQGVVSWISSQSEFTPKTILTNDERADLVYAIKVAV------KNDGSIKIGM 290

Query: 410 PAEV 413
             EV
Sbjct: 291 YGEV 294


>gi|326403988|ref|YP_004284070.1| hypothetical protein ACMV_18410 [Acidiphilium multivorum AIU301]
 gi|325050850|dbj|BAJ81188.1| hypothetical protein ACMV_18410 [Acidiphilium multivorum AIU301]
          Length = 337

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 93/278 (33%), Gaps = 21/278 (7%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN--- 204
              +        +  +L                   K++L R L  S  +++   K    
Sbjct: 51  AVQEGARVRRGELLATLDDTSYAAALAQAEAAMANRKATLARMLAGSRPEEIAQAKATMD 110

Query: 205 -LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L  +         + E +  KS   L++  + Q   L   ++                +
Sbjct: 111 ALKAQADNDGRVYRRLESLSRKSAASLQDRDNAQAAFLAARDQYQASRQAYLLAVKGPRA 170

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-V 322
            D+   +  + +  + + +  +  ++  + +P  G I  ++     + A  + P+  I +
Sbjct: 171 EDIAAARAAWREAAAAVALARRNLDETKLHAPANGVI-EDRILEPGDMASPATPVFTIAL 229

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQ 377
           P     ++RA V   ++  ++ G TA+V    +   R +     I  I P       + +
Sbjct: 230 PS--PLWVRAYVPEAELGRLRPGMTASVSTDSFPGTRYR---GWIGYISPTAEFTPRTIE 284

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              L+T   Y + + + D       + L  G PA V  
Sbjct: 285 SPELRTALVYRIRVYVCDP---RGQLRL--GMPATVRI 317


>gi|113954036|ref|YP_730252.1| hypothetical protein sync_1040 [Synechococcus sp. CC9311]
 gi|113881387|gb|ABI46345.1| conserved hypothetical protein [Synechococcus sp. CC9311]
          Length = 435

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/442 (12%), Positives = 127/442 (28%), Gaps = 90/442 (20%)

Query: 19  RMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R     + G+ GL T W +  P+   V   G ++  DN   + +  +G +    V  G +
Sbjct: 20  RQVGACLAGMGGLFTAWLLFWPVPTQVEGKGVLIYPDNAGVLNARSAGQVLNVDVRVGDR 79

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +   L+T                +  L   ++ EK  L                    
Sbjct: 80  VEKQQVLMTL--------------YLPELERELEQEKGNL-------------------- 105

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             + L K +   ++     I +  ++L   L +++       +L++  S           
Sbjct: 106 --NQLQKQNIELNQRDVLRIETARQALDTTLAKLKDDERRLGELQSTFSG---------- 153

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L  ++ L  +  V+          +    +   + +      L  +     +A   F  
Sbjct: 154 KLRNLEWLSRRAVVA---------PLSSEVVSAEQGLTSTSVALDDLKIQGKQALTIFQQ 204

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTRE-QKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              ++  +         D   K+ + E       TI +   G+++  Q        +   
Sbjct: 205 IKLDVESEQLDRTFVIDDLKRKIRVSEAKLAFDGTITAQRDGSVLDLQVI-PGQTIKMGD 263

Query: 317 PLMKI----VPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEK 369
            L  I    V           A   P   + +  G    V  P +    R    +  ++ 
Sbjct: 264 RLGTIGRGEVARGNGPDLIAVAYFPPADARRLPLGLPVEV-VPRWNQRGRFGGIEGKVKN 322

Query: 370 IDPIISQQDNNLQT-------------QEYYEVILKITDLAFSDNN-----------IEL 405
           +  + + Q++   T                    + +   + SD+              +
Sbjct: 323 VLTLPATQEDIATTTGNAQLAEDLAGDGPVMRAEISLQRRSRSDDGFLWTLSNGSGVFPI 382

Query: 406 RNGFPAEVLFTAKNTTLAQEII 427
           R+G   +     +  +    ++
Sbjct: 383 RDGLTVDTFAYVEWRSPITYVL 404


>gi|163745212|ref|ZP_02152572.1| hypothetical protein OIHEL45_06475 [Oceanibulbus indolifex HEL-45]
 gi|161382030|gb|EDQ06439.1| hypothetical protein OIHEL45_06475 [Oceanibulbus indolifex HEL-45]
          Length = 413

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 76/239 (31%), Gaps = 23/239 (9%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E ++   R  +   +    + + L  K AV +               +L     E     
Sbjct: 80  EGQALPDRDTMVRAESGGEIAEVLVAKGAVLEAGDLIARLSTTARDSDLARAREELNRAQ 139

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R  +          +   +     + Q + T A   + +T  E+      I +P  G  +
Sbjct: 140 REYDNAEALLERGVSTVDR-----VSQARATLASAQASVTTAEEALNNTEIRAPFPGR-L 193

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                S+  +      + ++V  +    I+ +V  + ++ VK+G  A V F     I   
Sbjct: 194 EMLDISAGEFVSTGDDIARLV-DNTPLTIQVQVPQQALKDVKEGQEADVTF-----ITGA 247

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + +  ++ +    S +          E+ ++ T+ A          G  A V      T
Sbjct: 248 EAQGEVQFVSSSASAETRTFTA----EIRVENTEGAIP-------AGISARVRIPTGET 295



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 58/183 (31%), Gaps = 11/183 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-------ET 92
           +     + G+ L + +   +++   G I +  V  G+ +  G  +               
Sbjct: 73  VTQVFVAEGQALPDRDT-MVRAESGGEIAEVLVAKGAVLEAGDLIARLSTTARDSDLARA 131

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES---REEQLLDFLGKYHSTC 149
            + ++  +    N    ++   S +D ++     L  A  S    EE L +   +     
Sbjct: 132 REELNRAQREYDNAEALLERGVSTVDRVSQARATLASAQASVTTAEEALNNTEIRAPFPG 191

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                   +  + S    + R+       + ++     L+ +    + D+T +     + 
Sbjct: 192 RLEMLDISAGEFVSTGDDIARLVDNTPLTIQVQVPQQALKDVKEGQEADVTFITGAEAQG 251

Query: 210 AVS 212
            V 
Sbjct: 252 EVQ 254


>gi|22298187|ref|NP_681434.1| devB-like secretion protein [Thermosynechococcus elongatus BP-1]
 gi|22294366|dbj|BAC08196.1| devB-like secretion protein [Thermosynechococcus elongatus BP-1]
          Length = 387

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 115/389 (29%), Gaps = 59/389 (15%)

Query: 35  SILL-PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           + L  PI   +++ G +  E  VV + +P                  G  L+   D    
Sbjct: 47  AALANPISDRITALGRLEPEGEVVAVSAPS------------MTERLGQLLVREGDRVVA 94

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                   +    R   D   S L     +Y+   +   ++  +      + +       
Sbjct: 95  GQPLAYLDTYPERRAERDLAASQLQEARLRYEAETRLALAQIAEAERRRDRANEPAIAAI 154

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +++ R                         ++A L +  ++      LF   AVSQ
Sbjct: 155 AAQQATIQR-------------------------IQAELETAHREYQRFAQLFAAGAVSQ 189

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            DL+ +   V     EL         + +        AN E       + R   Q Q   
Sbjct: 190 QDLDNRTVRVRSLQEELHNAQANLVRLQQQRRTEVATANAEVDAAQANLGR--VQTQVQL 247

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--IVPHS--KLTY 329
                 L + E   ++  I +P  G I   +  +     +  + + +  I+        Y
Sbjct: 248 LSAERNLQLAEARLQRTIIRAPRGGRI--LRIHT-----RAGENINEKGILELGNTDQMY 300

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
             A+V    +  V+ G  A +R               + ++  ++++ D    T    + 
Sbjct: 301 AVAEVYETDVPRVRVGQRAEIRSSALRA----PLSGRVAQVGLVVAKNDVT-DTDPAAKT 355

Query: 390 ILKITDLAFSDNNIELRNG---FPAEVLF 415
             ++ ++    +N E   G      EV  
Sbjct: 356 DARVVEVKIRLDNSEPVAGLTNMQVEVAI 384


>gi|254412804|ref|ZP_05026577.1| efflux transporter, RND family, MFP subunit [Microcoleus
           chthonoplastes PCC 7420]
 gi|196180539|gb|EDX75530.1| efflux transporter, RND family, MFP subunit [Microcoleus
           chthonoplastes PCC 7420]
          Length = 476

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 78/226 (34%), Gaps = 27/226 (11%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +    ++     L    + +        + + ++   R  L   + D T ++NL ++ A+
Sbjct: 149 LLQTAVTEAQAELAALNSEVARAQTQVGNAQARAEQARLELQQAKVDATRLQNLAQEGAI 208

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S+ +    +     +   L+  + + +   + +    +    +               Q 
Sbjct: 209 SRQEAELAQTAAATAQQNLQATLKQIRTEQQAVAAAQERVKAQ---------------QA 253

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             A+   +       +    + SPI G ++  +   S N       L+K+        + 
Sbjct: 254 ILAENKER-------QSYSLLASPINGVVLE-RVTESGNLVTPGSELLKLG-DFSQVKVE 304

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            +V+ +++ +++ G + TV     A+     F   + +I P    +
Sbjct: 305 VQVSDRELANIQVGQSVTVHLDALANE---SFSGKVTRISPAADSE 347



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 52/141 (36%), Gaps = 5/141 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDF 119
           G +    V+ G ++ QG  L   +D      +   +  +  L     R       +    
Sbjct: 123 GRVLNLAVDIGDRVKQGQILAQVDDALLQTAVTEAQAELAALNSEVARAQTQVGNAQARA 182

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + ++ +   ++   Q L   G      +++     ++  ++L+  L ++R+      
Sbjct: 183 EQARLELQQAKVDATRLQNLAQEGAISRQEAELAQTAAATAQQNLQATLKQIRTEQQAVA 242

Query: 180 DLENKSSLLRALLSSHQKDLT 200
             + +    +A+L+ +++  +
Sbjct: 243 AAQERVKAQQAILAENKERQS 263


>gi|167836817|ref|ZP_02463700.1| multidrug resistance protein [Burkholderia thailandensis MSMB43]
          Length = 412

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 90/273 (32%), Gaps = 32/273 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y+N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A+ + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVKAAQASLDAADQQLASNRALTANTTVADHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        +  + +P+ G +   +S           PLM +VP     ++ A 
Sbjct: 199 LAAAAKVRDAYLNNARNMLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPL-SAVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q++H++ G    +    Y      K+   +              P  +   N ++ 
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSV--KYHGKVVGFSAGTGAAFSLLPAQNATGNWIKV 314

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   V +++      ++ + +      +V   
Sbjct: 315 VQRLPVRVELDPKELKEHPLRIGLSMQVDVDIK 347



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 58/181 (32%), Gaps = 10/181 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                  +        + D+ +   + R    +   G             + +   SL  
Sbjct: 116 GLYVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASLDA 175

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
              ++ S      +  + +  ++L A        L   +N+        V++  +   +R
Sbjct: 176 ADQQLASNRALTANTTVADHPNVLAAAAKVRDAYLNNARNMLPAPVTGYVAKRSVQVGQR 235

Query: 222 I 222
           +
Sbjct: 236 V 236


>gi|238794072|ref|ZP_04637689.1| hypothetical protein yinte0001_24210 [Yersinia intermedia ATCC
           29909]
 gi|238726577|gb|EEQ18114.1| hypothetical protein yinte0001_24210 [Yersinia intermedia ATCC
           29909]
          Length = 321

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 90/253 (35%), Gaps = 17/253 (6%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-LNQQERIVYKS 226
           L  ++    N    + + +LL+A     +      +    + A S  D   ++++ ++ S
Sbjct: 74  LNALKQAQANVQSAQAQLALLKAGYRDEEIAQVKSEVAQREAAFSYADSFLKRQQGLWSS 133

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEK 285
                  +   +            +  + A YL     +++ Q +   A   ++L   + 
Sbjct: 134 KATSANELENARTARNQAQANLQASKDKLAQYLSGNRPQEIAQAEANLAQSEAELAQAQL 193

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             +  T+L+P AGT++  ++         S  +  +   +   ++RA V+   +     G
Sbjct: 194 NLQDTTLLAPSAGTVLT-RAVEPGTILSASNTVFTLS-LTDPVWVRAYVSEPHLNQAIPG 251

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSD 400
               V F        K +   I  + P       S +   L+T   Y + + ITD     
Sbjct: 252 TEVDV-FT--DGRPGKPYHGKIGFVSPTAEFTPKSVETPELRTDLVYRLRIIITDA---- 304

Query: 401 NNIELRNGFPAEV 413
            +  LR G P  +
Sbjct: 305 -DESLRQGMPVTI 316



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 87/307 (28%), Gaps = 51/307 (16%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G +I  G  L   ++    + +   + ++++ +               +
Sbjct: 45  GGRLASLTVDEGDKIQPGEVLGKLDNGPYLNALKQAQANVQSAQA--------------Q 90

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +L+  +   E   +              +  +         K T    +   R     
Sbjct: 91  LALLKAGYRDEEIAQVKSEVAQREAAFSYADSFLKRQQGLWSSKATSANELENARTARNQ 150

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + L+A      + L+  +           ++ Q E  + +S  EL      Q  +   
Sbjct: 151 AQANLQASKDKLAQYLSGNRP---------QEIAQAEANLAQSEAELA-----QAQLNLQ 196

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              L   +         E    L  +   F   ++    +     +  +   I GT V  
Sbjct: 197 DTTLLAPSAGTVLTRAVEPGTILSASNTVFTLSLTDPVWVRAYVSEPHLNQAIPGTEVD- 255

Query: 304 QSFSSSNYAQQSQP----LMKIVPHSK-------------LTYIRAKVTPKQIQH-VKKG 345
             F+     +  +P    +  + P ++                 R ++        +++G
Sbjct: 256 -VFTDG---RPGKPYHGKIGFVSPTAEFTPKSVETPELRTDLVYRLRIIITDADESLRQG 311

Query: 346 YTATVRF 352
              T+RF
Sbjct: 312 MPVTIRF 318


>gi|219847717|ref|YP_002462150.1| RND family efflux transporter MFP subunit [Chloroflexus aggregans
           DSM 9485]
 gi|219541976|gb|ACL23714.1| efflux transporter, RND family, MFP subunit [Chloroflexus aggregans
           DSM 9485]
          Length = 521

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/388 (14%), Positives = 120/388 (30%), Gaps = 48/388 (12%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SGI++   VE G+Q+  G  L   +     D +   +++ +  R  I+   +       
Sbjct: 93  ESGILRNLYVEVGTQVTSGQLLAEIDLGTLEDQLRRARINAEQDRLAIEQTIARAQIDVR 152

Query: 123 KYDVLEKAFESREEQL-LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
             +V     + R  +L         +          +++ R+                D 
Sbjct: 153 SAEVALATAKDRLAELTAPASAAEIAEARAALQRAEAALARTRNDASAVKTRAERALADR 212

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ--NDLNQQERIVYKSTLELRENIHEQKN 239
             +   ++A     +  L +   L  +  V+Q    L   E  V  + +EL      +  
Sbjct: 213 VAELQQVQAAYGQARARLEVENTLEVQALVNQLATQLRAAESSVALAQIELDTARGNEIA 272

Query: 240 MLRHINELYDEANLEFANYLK--------EISRDLEQNQRTFADEMSK------------ 279
            ++      + A  +    L            R ++Q Q        +            
Sbjct: 273 AVQAAEADVELARAKLDRLLSGPDQFEVAAAERAVQQAQIQLDAARQRTIPDPSLVKSLA 332

Query: 280 -----LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK- 333
                +  +E+  E + I +P  GTI   +S       Q   P+++++  +    I    
Sbjct: 333 ASELVIKEIERQIENRRIYAPFDGTITAIESL-VGFPVQAEAPVLRLM-DNSGLQITVSA 390

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           ++   ++ +  G   ++ F  Y              K+D + S + +             
Sbjct: 391 LSSADLERIVNGSQVSITFTRYPGRTFTGIVHKPTTKVDRLSSPELH------------- 437

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              ++F+  N+ +  G PA V       
Sbjct: 438 ---ISFNTGNLPVVIGDPALVTIDFGQR 462


>gi|330883357|gb|EGH17506.1| Type I secretion membrane fusion protein, HlyD [Pseudomonas
          syringae pv. glycinea str. race 4]
          Length = 71

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 26/64 (40%)

Query: 3  HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
          H+     +R     ++   +L + G      W+ L P++  ++  G ++       ++S 
Sbjct: 8  HYAVPGKERGVQFFVRAGWILMLAGAGSFFLWASLAPLDQGIAVQGTVVVSGKRKAVQSL 67

Query: 63 FSGI 66
            G+
Sbjct: 68 DGGV 71


>gi|238788771|ref|ZP_04632562.1| hypothetical protein yfred0001_10870 [Yersinia frederiksenii ATCC
           33641]
 gi|238723076|gb|EEQ14725.1| hypothetical protein yfred0001_10870 [Yersinia frederiksenii ATCC
           33641]
          Length = 321

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 91/253 (35%), Gaps = 17/253 (6%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-LNQQERIVYKS 226
           L  ++    N    + + +LL+A     +      +    + A S  D   ++++ ++ +
Sbjct: 74  LNALKQAQANVQSAQAQLALLKAGYREEEIAQVKSEVSQREAAFSYADSFLKRQQGLWAN 133

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEK 285
                  +   +            +  + A YL     +++ Q +   A   ++L   + 
Sbjct: 134 KATSANELENARTARNQAQANLQASKDKLAQYLSGNRPQEIAQAEANLAQSEAELAQAQL 193

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             +  T+LSP +GT++  ++         S  +  +   +   ++RA V+   +     G
Sbjct: 194 NLQDTTLLSPSSGTVLT-RAVEPGTILSASNTVFTLS-LTDPVWVRAYVSEPHLNQAIPG 251

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSD 400
               + F        K +   I  + P       S +  +L+T   Y + + ITD     
Sbjct: 252 TEVEI-FT--DGRPNKPYHGKIGFVSPTAEFTPKSVETPDLRTDLVYRLRIIITDA---- 304

Query: 401 NNIELRNGFPAEV 413
            +  LR G P  V
Sbjct: 305 -DESLRQGMPVTV 316


>gi|152985547|ref|YP_001347689.1| putative secretion protein [Pseudomonas aeruginosa PA7]
 gi|150960705|gb|ABR82730.1| probable secretion protein [Pseudomonas aeruginosa PA7]
          Length = 352

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/366 (11%), Positives = 97/366 (26%), Gaps = 82/366 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++   VE+   +  G  L   +D +                       +  D L  + 
Sbjct: 56  GFVQDVLVEDNQPVKAGQLLARLDDRDF----------------RTALAAAEADVLGAEA 99

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++       + +Q L    +                                       K
Sbjct: 100 NLANAEANLQRQQALIEQAR--------------------------------------AK 121

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A L   + + +  + L  K A S  +  Q +  +  ++  L E+        + +
Sbjct: 122 VRAGQAELVFARHEQSRYQTLASKGAGSLQNAQQAQSRIDTASARLAEDQAAVDATRKQV 181

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           + L                  + Q +       ++            I +P  G +   +
Sbjct: 182 SVLEAR---------------VGQARGDLQRMQARRDQARLDLSYCEIRAPFDGMV-GRR 225

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y      L+ +VP  +   +       Q+ HV+ G    +R   +     +  +
Sbjct: 226 QLRVGAYVTPGSALLAVVPLQQAYVV-GNFQETQLTHVRPGQAVEIRVDTFP---GEVLR 281

Query: 365 AIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFT 416
             ++ I P      +    +  T  + +V+ +I      +        LR G   +    
Sbjct: 282 GHVDSIAPATGLSFAPIAPDNATGNFTKVVQRIPVKILLEPRQALVGRLRVGMSVDARID 341

Query: 417 AKNTTL 422
               T 
Sbjct: 342 TGTATA 347


>gi|260599076|ref|YP_003211647.1| multidrug efflux system protein EmrA [Cronobacter turicensis z3032]
 gi|260218253|emb|CBA33183.1| Multidrug resistance protein A [Cronobacter turicensis z3032]
          Length = 391

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 81/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     L   + + R + +N         + +  L+  Q DL     L   N + +
Sbjct: 99  QQAFEKAKTELASSVRQTRQLMINSKQYAANIDVQKTALAQAQSDLNRRVPLGSANLIGR 158

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 159 EELQHARDAVASAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 212

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         ++  I+SP+ G +   ++         + PLM IVP S   ++ A 
Sbjct: 213 ------------ALQRTKIVSPMTGFVSR-RAVQVGAQISPTTPLMAIVPSSG-LWVDAN 258

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ H++ G  ATV    Y D    ++   +  +D          P  +   N ++ 
Sbjct: 259 FKETQLAHMRIGQPATVVSDIYGDDV--EYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 316

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++       + + +
Sbjct: 317 VQRLPVRIELDAKQLEQHPLRI 338



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 53/160 (33%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K  VEN   + QG  L+T +  +     +  K  + +      
Sbjct: 58  VAGNQVQIMAQVSGSVTKVWVENTDFVKQGDVLVTLDPTDAQQAFEKAKTELASSVRQTR 117

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                        DV + A    +  L     LG  +    +   +   +V  +      
Sbjct: 118 QLMINSKQYAANIDVQKTALAQAQSDLNRRVPLGSANLIGREELQHARDAVASAQAQLDV 177

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+       LE++ ++ +A        L + + 
Sbjct: 178 AIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALQRT 217


>gi|303247953|ref|ZP_07334220.1| secretion protein HlyD family protein [Desulfovibrio fructosovorans
           JJ]
 gi|302490677|gb|EFL50580.1| secretion protein HlyD family protein [Desulfovibrio fructosovorans
           JJ]
          Length = 368

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/412 (12%), Positives = 123/412 (29%), Gaps = 88/412 (21%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           ++  P  +  +  L   G+ G + W      E +  +        +V  +     G +K+
Sbjct: 30  RKRRPRLVVLIVFLLCCGVGGALYWRHARHFESTDDA----FVAGHVTSVAPRVPGRVKE 85

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V +  Q+ QG  LL  + +              N +  ++  ++ALD           
Sbjct: 86  VLVTDNQQVRQGDVLLRIDPV--------------NYQTRLEAAQAALDTA--------- 122

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                                           R+L+  +++  +        E + +  +
Sbjct: 123 -------------------------------KRNLEEAVSQEGAALATADAAEAQVASAK 151

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A   +  K+      L  +  VSQ               E ++N            ++  
Sbjct: 152 ATADNAVKERVRYDKLLSERVVSQ---------------ESKDNADTTARTAVAALDVAR 196

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           + ++     +   +  +E  +    +  +     +       + + ++G +         
Sbjct: 197 KKHIADVAQVALAAAAIETARSKVNEAQADRDQADLDLTHTVVHARVSGRVTNKAV-EPG 255

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           +Y Q  Q +M +V      ++ A     Q+ H++ G   ++    + D   K+ +  ++ 
Sbjct: 256 DYLQAGQAVMSLV--QPDVWVVANFKETQLTHMRPGQPVSMVVDAFPD---KELRGRVDS 310

Query: 370 IDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNI-ELRNGFPAE 412
           I                T  Y +V+    +KI         +  L  G   E
Sbjct: 311 IQRGTGAAFSLLPPENATGNYVKVVQRVPVKIVFDGIRPETLSRLAPGMSVE 362


>gi|282901122|ref|ZP_06309053.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
 gi|281193954|gb|EFA68920.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
          Length = 418

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 88/262 (33%), Gaps = 38/262 (14%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +   G+      L  + + +    +   ++E +   +R  L   + D    + L ++ A+
Sbjct: 99  LLKTGLEQQEAELGDRESEVERARIQVGNIEAEVEKVRLELMQAKSDSDRQQKLLQEGAI 158

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           SQ    Q    V      L+  I +Q+   + +                         Q 
Sbjct: 159 SQQAAQQAVTKVKTYQQILKSTIEKQRTEKKAVAA----------------------AQN 196

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               + + +    +      ++SPI G +   +     N  Q    ++KI   S++  + 
Sbjct: 197 RVLAQSAVVKAARERLSYTDLISPITGVVTE-KITEPGNLLQSGNEVIKIADLSQIKVV- 254

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            KV+  ++  V+ G    V    + D +       IE+I P+                 +
Sbjct: 255 VKVSELELGKVEIGQRVEVNLDAFPDEK---IIGRIERISPVADST-----------ARV 300

Query: 392 KITDLAFSDNNIELRNGFPAEV 413
              ++   ++  ++R+G  A V
Sbjct: 301 VPVEIVIPNSQGKIRSGMLARV 322



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 60/155 (38%), Gaps = 5/155 (3%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---- 106
                ++ ++S   G +    +E G ++ +G  +   +DI     ++ ++  + +     
Sbjct: 59  TVPRKIISVRSQVEGRLIGLDLEIGDRVSKGQRVGRLDDILLKTGLEQQEAELGDRESEV 118

Query: 107 -RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            R  I       +    + ++++   +S  +Q L   G      ++     + +  + LK
Sbjct: 119 ERARIQVGNIEAEVEKVRLELMQAKSDSDRQQKLLQEGAISQQAAQQAVTKVKTYQQILK 178

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             + + R+        +N+     A++ + ++ L+
Sbjct: 179 STIEKQRTEKKAVAAAQNRVLAQSAVVKAARERLS 213


>gi|187919131|ref|YP_001888162.1| secretion protein HlyD family protein [Burkholderia phytofirmans
           PsJN]
 gi|187717569|gb|ACD18792.1| secretion protein HlyD family protein [Burkholderia phytofirmans
           PsJN]
          Length = 366

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 91/298 (30%), Gaps = 21/298 (7%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V +  F    + L+    + +          + S   S+     +         +   + 
Sbjct: 79  VHDNQFVHANDVLIRLDARDYDARLAQATAEVQSAQASVTELQAKKSLQLATINEQAAEV 138

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L+    D T  + L + +AVS   + + +  + K+   +  +        R I 
Sbjct: 139 RASGAELTRSAADQTRYRELVKDDAVSNQVVERADADLTKAHAAVDRSSAALIAAQRQIA 198

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L                  +   +   A   +   +     E  TI SPI G +  N++
Sbjct: 199 VL---------------DAQIGDAEARIATAQAAQRVAALNVEYTTIRSPIDGYV-GNRT 242

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A     L+ +VP S   +I A     Q++ ++ G +  V     +       ++
Sbjct: 243 ARVGLLANTGVSLLTVVPSSG-LWIDANFKEDQLKKMRVGDSVDVDLDASSTPIHGVVES 301

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +        S       T  + +++    +++           LR G  A V     +
Sbjct: 302 LAPATGATFSVLPAENATGNFTKIVQRVPVRVRLDVPKSMQGVLRPGLSATVKVHLDS 359


>gi|16265154|ref|NP_437946.1| protein secretion protein [Sinorhizobium meliloti 1021]
 gi|15141294|emb|CAC49806.1| putative multidrug resistance efflux protein [Sinorhizobium
           meliloti 1021]
          Length = 365

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/358 (11%), Positives = 104/358 (29%), Gaps = 81/358 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +   +VE+   +  G  L   +D              ++ R  +              
Sbjct: 76  GYVTAVEVEDNQAVRAGDVLFRIDD--------------RDYRAKLAQ------------ 109

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                     +     +++V   + ++   +R         E +
Sbjct: 110 ---------------------AVANVEAAEARLTNVDAEMALQHALIRQA-------EAQ 141

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              + A L+   K     + L     +SQ  +++ +    ++   +       +   + I
Sbjct: 142 RRSVVAELNLAAKAYDRRRELIRSETISQAHVDESDAAKSRAEANVLAASATVEAQQQRI 201

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             L  +     A   +  +                  +     E   + +P+ G ++ N+
Sbjct: 202 AVLAAQREAAVAAVAQAEAAR---------------DLAGIDLESTVVRAPV-GGVIGNR 245

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                        L+ IVP   +  + A     Q++H++ G  A++    Y   +    +
Sbjct: 246 QVRVGRLVAPGASLLDIVPLDNVWIV-ANFKETQLEHIRPGQRASITIDGY---KSGALE 301

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNI--ELRNGFPAEVLF 415
            +++   P           +  T  +  V+ ++   + F+ N +   L  G  A V  
Sbjct: 302 GVVDSFAPGSGSAFSLLPADNATGNFVRVVQRVPVKIRFAGNPLSGRLLPGLSARVEI 359


>gi|94313435|ref|YP_586644.1| efflux pump HlyD family protein [Cupriavidus metallidurans CH34]
 gi|93357287|gb|ABF11375.1| membrane fusion protein of efflux pump HlyD family [Cupriavidus
           metallidurans CH34]
          Length = 349

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/372 (12%), Positives = 114/372 (30%), Gaps = 86/372 (23%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISV--SSSGEILNEDNVVEIKSPFSGIIK 68
           +  P   + +TL  ++  + L  ++     E +V   SS +   + +VV + SP  G I 
Sbjct: 7   QKGPLRGRVITLAIVLVAVLLSVYAY----ERTVHHPSSDDATLDADVVHVASPVGGRIA 62

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V     + +G  L   + +         K+++   R  ++  ++ L           
Sbjct: 63  RIAVTENQHVAKGDVLFEIDPVPY-------KLAVDQARADLELAQAGLG---------- 105

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                          +  +  S+     I+S   +   +   + +  + R          
Sbjct: 106 --------------TRRRTIVSERAAASIASEQTTRAAQNYALTARTVER---------- 141

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                        ++ L     V +  L+Q +   + + + L++   +     + I    
Sbjct: 142 -------------LRPLAADGYVPKQQLDQAQVAQHDAAVSLKQANVQHSASTQAIGND- 187

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                             +          + L I ++  +   + +P  G +      + 
Sbjct: 188 ------------------DDAIAAVHAREAALAIAQRALQDTVVHAPQEGRVTGLSVLA- 228

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAII 367
                 +Q L  +V   +   + A      +  +  G  ATV    Y+ I R K  +  +
Sbjct: 229 GEVVIPNQSLFLLVHTGEWFAV-ANFRETSLADIHIGDCATV----YSMIDRRKAIRGTV 283

Query: 368 EKIDPIISQQDN 379
             I   I+  + 
Sbjct: 284 TGIGAGITDTER 295


>gi|307132321|ref|YP_003884337.1| membrane fusion component of tripartite multidrug resistance system
           [Dickeya dadantii 3937]
 gi|306529850|gb|ADM99780.1| Membrane fusion component of tripartite multidrug resistance system
           [Dickeya dadantii 3937]
          Length = 391

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 83/252 (32%), Gaps = 32/252 (12%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L   + ++    +N    +    L +  L     DL   + L   NA+ + DL      V
Sbjct: 109 LANSVRQVHQQMINVRQYQANIDLQQIALDKAISDLNRREVLGRANAIGREDLQHARDQV 168

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +   L                    A  ++A     +     + Q   A   + L   
Sbjct: 169 ASARASLEA------------------AKQQYAATQALVLNTSLEQQPAIAQAATDLRNA 210

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               ++  I+SP+ G +   +S         S  LM +VP     ++ A     Q+ +++
Sbjct: 211 WLALKRTHIVSPVDGYVSR-RSVQLGARVTPSSALMAVVPA-APLWVDANFKETQLANMR 268

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKI 393
            G  AT+    Y D     +K  +  +D          P  +   N ++  +   V +++
Sbjct: 269 IGQPATIISDLYGDSV--VYKGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIEL 326

Query: 394 TDLAFSDNNIEL 405
                +D  + +
Sbjct: 327 DPKQLTDYPLRI 338



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 69/203 (33%), Gaps = 8/203 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            ++  +    +TLL I+       W +    +      + +     N ++I S  +G + 
Sbjct: 15  SKSKKSRKGILTLLMIVFFFIGCVWFAYWYLVLRHHQETDDAYVAGNQIQIMSQVNGSVA 74

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+N   + +G  L+  +  +     +  K ++ N    +  +   +       D+ +
Sbjct: 75  RVNVDNTDFVKKGDVLVELDPTDAEQAFERSKTTLANSVRQVHQQMINVRQYQANIDLQQ 134

Query: 129 KAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-----DL 181
            A +     L   + LG+ ++   +   +    V  +        +     +       L
Sbjct: 135 IALDKAISDLNRREVLGRANAIGREDLQHARDQVASARASLEAAKQQYAATQALVLNTSL 194

Query: 182 ENKSSLLRALLSSHQKDLTMMKN 204
           E + ++ +A        L + + 
Sbjct: 195 EQQPAIAQAATDLRNAWLALKRT 217


>gi|182679451|ref|YP_001833597.1| secretion protein HlyD family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182635334|gb|ACB96108.1| secretion protein HlyD family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 358

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/311 (10%), Positives = 94/311 (30%), Gaps = 14/311 (4%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            ++   + ++      R +Q+     +      ++ +        +L      + +   +
Sbjct: 40  AYVTADFTIVAPKISGRIDQVKVEDNQRVRQGEELAHIEDDDYRTALMAAEAEVTTAKAD 99

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             +L  + S   A+++  +  +       +    +    +   +    +  + +    E 
Sbjct: 100 IANLTAEISRQEAVIAQAKAAVEADAAALDFAKANAQRYHNLSKGGAGTVEQQQAAESEY 159

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +  +       + A +     +  +     + Q       S     E      TI +P+ 
Sbjct: 160 RQRVA-ARTRDEAAVVAAEKQIAVLEAQKARAQGARESAESHRYQAELNLSYTTIPAPVD 218

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   +      Y      L+ +VP  +   + A     Q+ HV  G  A +    + D
Sbjct: 219 GMV-GARGVRVGAYVNPGTALLAVVPLQEAYVL-ANFQETQLTHVVPGQKALIHVDTFPD 276

Query: 358 IREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNN----IELRNGF 409
                    ++ I P      +    +  T  + +V+ ++      D +     ++R G 
Sbjct: 277 T---PIHGHVDSIAPATGVAFAPIQPDNATGNFTKVVQRLPVKIVFDPDQDIVRKIRVGM 333

Query: 410 PAEVLFTAKNT 420
             E      + 
Sbjct: 334 SVEAEIDTASK 344



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 65/202 (32%), Gaps = 17/202 (8%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGE------ILNEDNVVEIKSPFSGIIKK 69
            +K+  LL+  G++ L   +    ++  VS  G            +   +    SG I +
Sbjct: 2   PIKKPLLLASSGVVILTALAW--HMDRLVSGDGIHQMTDDAYVTADFTIVAPKISGRIDQ 59

Query: 70  FQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +VE+  ++ QG  L   ED       +     +   K  I NL   I  +++ +     
Sbjct: 60  VKVEDNQRVRQGEELAHIEDDDYRTALMAAEAEVTTAKADIANLTAEISRQEAVIAQAKA 119

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             +    A +  +     +          V      +     + ++          +  E
Sbjct: 120 AVEADAAALDFAKANAQRYHNLSKGGAGTV--EQQQAAESEYRQRVAARTRDEAAVVAAE 177

Query: 183 NKSSLLRALLSSHQKDLTMMKN 204
            + ++L A  +  Q      ++
Sbjct: 178 KQIAVLEAQKARAQGARESAES 199


>gi|262280123|ref|ZP_06057908.1| secretion protein HlyD [Acinetobacter calcoaceticus RUH2202]
 gi|262260474|gb|EEY79207.1| secretion protein HlyD [Acinetobacter calcoaceticus RUH2202]
          Length = 369

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 91/284 (32%), Gaps = 29/284 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  + K    +A     
Sbjct: 99  QVLMHIDATTYDQKVTQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVDQAKAQYELS 158

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              L   + L    A S+++         K+  +   N+   K    ++        L  
Sbjct: 159 LAQLRRYQQLGNSGAASKSE-------QDKAAADAENNLAALKQAEANV--------LVA 203

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              LK         +   +   ++L   + T++   I++P+ G  +   +     Y    
Sbjct: 204 NEALKTAQVAEAGLEAQVSSAKAQLDQAQTTKDYSVIVAPMDGQ-LGEVNPRVGQYVAAG 262

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P        A     QI +++ G  A         ++ KKF   +E+I P   
Sbjct: 263 SQLLYLIPQQTWVI--ANFKETQIANMRIGQKAWFTVDA---MKHKKFTGHVEQISPAAG 317

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPA 411
            +      +  T  + +V+    ++IT     +    LR G   
Sbjct: 318 SEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGMEYLRPGMSV 361



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 91/270 (33%), Gaps = 13/270 (4%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P     +  +  + I+G++   W+  + P   SV  +     +     + S  +G +K  
Sbjct: 28  PTKRSTLLWMLGVLIVGILVILWAWRIGPFATSVQQTDNSYVKGKTTILSSQINGYVKDV 87

Query: 71  QVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            V++   + +G  L+  +         +    ++  K ++ N    I  +++ +     K
Sbjct: 88  LVKDFDHVKKGQVLMHIDATTYDQKVTQAASGVEQAKNTLANQTQSIAQKQADIVAAQAK 147

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D  +  +E    QL  +    +S  +       ++        L  ++    N L    
Sbjct: 148 VDQAKAQYELSLAQLRRYQQLGNSGAASKSEQDKAAADAE--NNLAALKQAEANVLVANE 205

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   +  +  ++  K   ++   ++ D +     +     E+   + +       
Sbjct: 206 ALKTAQVAEAGLEAQVSSAKAQLDQAQTTK-DYSVIVAPMDGQLGEVNPRVGQYVAAGSQ 264

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  L  +     AN+ +    ++   Q+ +
Sbjct: 265 LLYLIPQQTWVIANFKETQIANMRIGQKAW 294


>gi|14970545|emb|CAC44350.1| EmrA protein [Erwinia chrysanthemi]
          Length = 391

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 83/252 (32%), Gaps = 32/252 (12%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L   + ++    +N    +    L +  L     DL   + L   NA+ + DL      V
Sbjct: 109 LANSVRQVHQQMINVRQYQANIDLQQIALDKAISDLNRREVLGRANAIGREDLQHARDQV 168

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +   L                    A  ++A     +     + Q   A   + L   
Sbjct: 169 ASARASLEA------------------AKQQYAATQALVLNTSLEQQPAIAQAATDLRNA 210

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               ++  I+SP+ G +   +S         S  LM +VP     ++ A     Q+ +++
Sbjct: 211 WLALKRTHIVSPVDGYVSR-RSVQLGARVTPSSALMAVVPA-APLWVDANFKETQLANMR 268

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKI 393
            G  AT+    Y D     +K  +  +D          P  +   N ++  E   V +++
Sbjct: 269 IGQPATIISDLYGDSV--VYKGKVVGLDMGTGSAFSLLPAQNATGNWIKVVERLPVRIEL 326

Query: 394 TDLAFSDNNIEL 405
                +D  + +
Sbjct: 327 DPKQLTDYPLRI 338



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 69/203 (33%), Gaps = 8/203 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            ++  +    +TLL I+       W +    +      + +     N ++I S  +G + 
Sbjct: 15  SKSKKSRKGILTLLMIVFFFIGCVWFAYWYLVLRHHQETDDAYVAGNQIQIMSQVNGSVA 74

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+N   + +G  L+  +  +     +  K ++ N    +  +   +       D+ +
Sbjct: 75  RVNVDNTDFVKKGDVLVELDPTDAEQAFERSKTTLANSVRQVHQQMINVRQYQANIDLQQ 134

Query: 129 KAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-----DL 181
            A +     L   + LG+ ++   +   +    V  +        +     +       L
Sbjct: 135 IALDKAISDLNRREVLGRANAIGREDLQHARDQVASARASLEAAKQQYAATQALVLNTSL 194

Query: 182 ENKSSLLRALLSSHQKDLTMMKN 204
           E + ++ +A        L + + 
Sbjct: 195 EQQPAIAQAATDLRNAWLALKRT 217


>gi|188534328|ref|YP_001908125.1| Putative multidrug resistance protein K [Erwinia tasmaniensis
           Et1/99]
 gi|188029370|emb|CAO97247.1| Putative multidrug resistance protein K [Erwinia tasmaniensis
           Et1/99]
          Length = 380

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 110/370 (29%), Gaps = 81/370 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E + V I    SG I + +V++  ++ +G  L+  +         L+  S +  R     
Sbjct: 76  EADAVTIAPKVSGYITQLKVKDNQRVKKGDLLVVID---------LRDASAERDRA---- 122

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTR 170
                                 + QL   + + H   +++    +   +       +L R
Sbjct: 123 ----------------------QAQLGIAVAQLHQAQAQLALARVQYPAQKEQALAQLAR 160

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             + YLN  + + +   +    +S                         +R +  ++ +L
Sbjct: 161 AEANYLNAREDDKRQRGVDPRATS-------------------------QRNIDAASAQL 195

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R    E KN    +         + A  +++    +E  Q       ++L          
Sbjct: 196 RSAKAELKNAQAQVA-----VASQVALQIRQQETSVEARQSQVDQAQAQLNTASLNLSYT 250

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P  G I            Q    L  +V      +I A     Q+  +K G    +
Sbjct: 251 EVRAPYDGFITKRNV-QVGTLVQAGSSLFSLVSAD--MWIVANFKESQLARMKPGSKVDI 307

Query: 351 RFPHYADIREKKFKAIIEKI--------DPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
               + D++    K  ++ I            ++       +    V +KI   +  D N
Sbjct: 308 SVDAWPDLK---LKGHVDSIQMGSGSRFSAFPTENATGNYVKIVQRVPVKIVIDSGLDAN 364

Query: 403 IELRNGFPAE 412
             L  G   E
Sbjct: 365 HPLPIGLSVE 374


>gi|6578955|gb|AAF18149.1|AF207838_8 accessory protein CbaC [Carnobacterium maltaromaticum]
          Length = 455

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 65/406 (16%), Positives = 132/406 (32%), Gaps = 39/406 (9%)

Query: 49  EILNEDNVVEI---KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
            I  +     I   ++P    I +  +     + +G  ++ F+ +   +     +  +  
Sbjct: 49  RIAPKSTTQTISKLQAPIETQITENYLYENKVVKKGEIVVVFDTLSLENEQKQFEDEVLV 108

Query: 106 LRCHIDTEKSALDFL-NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           L       ++ +  + NN+   +         QL     +  S           S     
Sbjct: 109 LEEQKKAAQTFIISVENNENQFVADDSFGYPNQLNALFAEQESLQYITQQATDLSEINQE 168

Query: 165 KMKLTRMRS--IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN----Q 218
             K T  +       RL+ +++   ++    + Q+       +  K    Q  +N    +
Sbjct: 169 AYKKTEEQLDFQLTKRLNAQSEWEQVKKAWGNQQEIQEFSTEIISKYKTWQLQVNDGTEE 228

Query: 219 QERIVYKSTLE-LRENIHEQKNMLRHIN----------ELYDEANLEFANYLKEISRDLE 267
           Q+  V  + L  + ENI E K  +  I              +E N E A   +   + L 
Sbjct: 229 QKNQVIGAILSTIDENIGELKKEIEQIQGEKAKLIGPITSKNEINSENAKVKQNKEQLLA 288

Query: 268 QNQRTFADEMSK-------LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           + ++   +   K       +  L++  +Q  + +PI GTI  N+ F +     +   + +
Sbjct: 289 KTKQDIIEFDDKQKKIEVSIKQLKEKIQQGILKAPIGGTISLNEEFKTMIDIPKGALIAE 348

Query: 321 IVPH--SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           I P   S+     A++   ++  +KKG            +  K     +  I       +
Sbjct: 349 IYPTTGSREQTFTAQLPANEMTRIKKGMNVHFTLDK-KGVAAKIVDGKLTGISETSETTE 407

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           N      +Y V  KI        N  +R G   E+       T  Q
Sbjct: 408 NGT----FYTVTGKIQ----IPKNFSIRYGLTGEISLIVGKKTYWQ 445


>gi|148239859|ref|YP_001225246.1| membrane-fusion protein [Synechococcus sp. WH 7803]
 gi|147848398|emb|CAK23949.1| Membrane-fusion protein [Synechococcus sp. WH 7803]
          Length = 440

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/441 (12%), Positives = 134/441 (30%), Gaps = 92/441 (20%)

Query: 23  LSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +S+ G+ G    W +  P+   V   G ++  DN   + +   G + +   + G ++ QG
Sbjct: 25  VSLAGVGGLFGLWLMFWPVPTQVEGQGVLIYPDNAGILNARSGGQVLRIDTKVGDRVRQG 84

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L+T         +D ++ +++ L                                   
Sbjct: 85  QVLMTLYLPVLERQLDQQQGNLEQLMLQ-------------------------------- 112

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
               +   ++     I++   +L   L ++         L++  +     L    +   +
Sbjct: 113 ----NEELNQRDALRIATAKAALDTALAKLDDDQKRLAKLQSTYTSKLKNLDWLAQR-EV 167

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +  L      ++  L      +    ++ ++ I + + +   I     + N +  +  ++
Sbjct: 168 VAPLSRAVVSAEQGLTTTSVQLDDIKIQRKDEITQFQQIKLGIETEQLDRNFQIDDLKRK 227

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           I                K+T  +   + K I +  +GT++  Q  +     + S  L  I
Sbjct: 228 I----------------KVTEAKIAFDGKVI-AERSGTVLDLQVIA-GQTVKTSDRLGTI 269

Query: 322 ----VPHSKL------TYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKI 370
                P              +  +P   + +  G    V  PH+    R    +  +  +
Sbjct: 270 GRNQAPGGDQRKTGGDLIAVSYFSPADARRLPLGLPVEV-VPHWNQRGRFGGIEGKVRSV 328

Query: 371 DPIISQQDNNLQT-------------QEYYEVILKITDLAFSDNN-----------IELR 406
             + + Q++   T                    +++  L  SD+              +R
Sbjct: 329 LTLPATQEDISTTVGNSQLAEELVKDGPVMRAEIELDRLPGSDDGYRWTLSQGSGVFPIR 388

Query: 407 NGFPAEVLFTAKNTTLAQEII 427
           +G   +     +  +    II
Sbjct: 389 DGLTVDTFAYVEWRSPITYII 409


>gi|121535651|ref|ZP_01667456.1| efflux transporter, RND family, MFP subunit [Thermosinus
           carboxydivorans Nor1]
 gi|121305755|gb|EAX46692.1| efflux transporter, RND family, MFP subunit [Thermosinus
           carboxydivorans Nor1]
          Length = 372

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 58/195 (29%), Gaps = 19/195 (9%)

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+  + + K  L +   +  E               L+  +  +    +    +     +
Sbjct: 105 LQAQVTQAKERLDN-AAVKYERIARLTAIGGASKEQLDTARMDYNIAKASYDEVMSKLSE 163

Query: 290 KTILSPIAGTIVYNQSFS----SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             I+SPI GT++     +    +         ++  V       I A+V    I  V  G
Sbjct: 164 AVIVSPIDGTVIGKPLSAGEMVTQGVNNP--TVILTVADMSKMQIEAQVDQTDIGKVALG 221

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
              T     Y     K+F   +  I     ++    Q   YY V + + +         L
Sbjct: 222 QKVTFTVDAYP---GKEFTGTVATIS----KKPVVQQNVTYYPVTIDVNNAENL-----L 269

Query: 406 RNGFPAEVLFTAKNT 420
             G  A V  T    
Sbjct: 270 NPGMVARVSITVSER 284



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 11/120 (9%)

Query: 21  TLLSIIGIIGLITWSILLP----------IEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
            +  +    G    S   P          I  +V+++G I    N+V+I S  +  IK+ 
Sbjct: 25  VIAGLFFAQGAGKMSAAAPQQVIQVERGDIVATVAATGTIKPV-NMVDISSKITAQIKEV 83

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +V+   Q+  G  L+  ED      +   K  + N     +             + L+ A
Sbjct: 84  KVKENDQVKAGQVLVILEDSGLQAQVTQAKERLDNAAVKYERIARLTAIGGASKEQLDTA 143


>gi|300722296|ref|YP_003711580.1| multidrug resistance secretion protein [Xenorhabdus nematophila
           ATCC 19061]
 gi|297628797|emb|CBJ89375.1| multidrug resistance secretion protein [Xenorhabdus nematophila
           ATCC 19061]
          Length = 395

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 77/269 (28%), Gaps = 28/269 (10%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 +     +      L   +        +    +    + +  L   Q DL   + 
Sbjct: 91  LIQLDPRDAELALEKAENELANTVRATHQNMADSKKYQAAIEIKKIALRKAQNDLNRREF 150

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L  K+ + + +L     +V  +  +L   I + K+    I +   E           +  
Sbjct: 151 LGTKDLIGKEELQHMREMVSAAQADLDIAIAQYKSNQAVILDTPLEKQPSVEKAASSVRD 210

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                                T ++  I+SP+ G I   +S    +      PLM I+P 
Sbjct: 211 AWL------------------TLQRTKIVSPVDGYIAR-RSVQVGSRINSGTPLMAIIPA 251

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHY--ADIREKKFKAI-IEKIDPIISQQDNNL 381
           +   +I A     Q+ +++ G    +    Y    +   K   I +            N 
Sbjct: 252 TN-MWIEANFKETQLTNMRIGQPVKITSDFYGSDVVYTGKVTGIDMGTGSAFSLLPAQNA 310

Query: 382 QTQ-----EYYEVILKITDLAFSDNNIEL 405
                   +   V +++       + + +
Sbjct: 311 SGNWIKVVQRLPVRVELDPAQVKQHPLRI 339



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 71/204 (34%), Gaps = 9/204 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           N KR     +  MTLL +I   G +  +    I      +       N V++ S  +G +
Sbjct: 17  NKKRQRRNIILLMTLLFLIS--GAMYTAYWFIILRHYQETDNAYVAGNQVQVMSQITGSV 74

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNN 122
                +N   +  G  L+  +  +    ++  +  + N      +   D++K        
Sbjct: 75  TTVNFDNTDFVKSGQILIQLDPRDAELALEKAENELANTVRATHQNMADSKKYQAAIEIK 134

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-- 180
           K  + +   +    + L           +     +S+    L + + + +S     LD  
Sbjct: 135 KIALRKAQNDLNRREFLGTKDLIGKEELQHMREMVSAAQADLDIAIAQYKSNQAVILDTP 194

Query: 181 LENKSSLLRALLSSHQKDLTMMKN 204
           LE + S+ +A  S     LT+ + 
Sbjct: 195 LEKQPSVEKAASSVRDAWLTLQRT 218


>gi|237653487|ref|YP_002889801.1| efflux transporter RND family, MFP subunit [Thauera sp. MZ1T]
 gi|237624734|gb|ACR01424.1| efflux transporter, RND family, MFP subunit [Thauera sp. MZ1T]
          Length = 476

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 100/307 (32%), Gaps = 38/307 (12%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI-YLNR 178
           ++ +     +A E RE   L           + +   ++    ++     R+R +  L  
Sbjct: 135 VSAQIAGRVQAVEVREGDALAPGQALLRLDEREWGAAVAQAGAAVVQGEARLRQLRELGL 194

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
              E       A     Q+    ++ L  +   SQ  L++  R +  +  ++R    ++ 
Sbjct: 195 PVAEQALRQAEATALQAQRHHRRVQELVARGFYSQAQLDEARRALDVADSQVRSARLQRA 254

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           +                         ++E  +       + L   E      T+ +P+AG
Sbjct: 255 SQQPG-------------------GSEIELARSALEQARAALAAAETRLSYATLRAPVAG 295

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T++      + +  Q   PLM I P      +  ++  K +  +  G  A      Y   
Sbjct: 296 TVLTRNV-EAGDTVQPGTPLMTIAPAGAT-ELTVQIDEKNLALLHPGQAALASADAYPGE 353

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA- 417
           R   F A++  I P +  Q  ++      EV L++ +      +          +   A 
Sbjct: 354 R---FAAVLAYIAPSVDAQRGSV------EVRLRVPEPPPYLRHE-----MTVSLDIEAA 399

Query: 418 -KNTTLA 423
            +  TLA
Sbjct: 400 RRERTLA 406



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 51/145 (35%), Gaps = 2/145 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P+  ++ +SG +      + + +  +G ++  +V  G  +  G  LL  ++ E    + 
Sbjct: 115 GPLRQAIVASGRVRTP-ERIVVSAQIAGRVQAVEVREGDALAPGQALLRLDEREWGAAVA 173

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
               ++      +   +  L     +  + +    + + Q      +            +
Sbjct: 174 QAGAAVVQGEARLRQLR-ELGLPVAEQALRQAEATALQAQRHHRRVQELVARGFYSQAQL 232

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLE 182
               R+L +  +++RS  L R   +
Sbjct: 233 DEARRALDVADSQVRSARLQRASQQ 257


>gi|163857897|ref|YP_001632195.1| secretion protein [Bordetella petrii DSM 12804]
 gi|163261625|emb|CAP43927.1| probable secretion protein [Bordetella petrii]
          Length = 345

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/329 (11%), Positives = 95/329 (28%), Gaps = 26/329 (7%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                   +      +R  I +    +  L     V E       + L+    + +    
Sbjct: 28  RPESAAATQSTDDAYIRAEITSVAPEITGLVEAVLVEENQPVRAGQLLVQIDDREYVLAE 87

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +     ++    +      ++          ++     +A     + D +  K+L    +
Sbjct: 88  RNAAAALAHARAAADGIHAQIEVQQSVIRQAQSTIEADQATRELARLDYSRYKSLAADGS 147

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +  +++   +  +E  +   +Q  +                     +  DL + Q
Sbjct: 148 ---GTVQARQQAKARLQVEKAQQTKDQAILQAQ------------KGRQAALQADLLRAQ 192

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  + L        +  I +PIAGTI + +     NYA+   PL+ +VP +   YI
Sbjct: 193 AEIRQAEAALAQARLDLSRTRITAPIAGTIGHKRVR-VGNYARTGDPLLTLVPLTD-IYI 250

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIRE-------KKFKAIIEKIDPIISQQDNNLQT 383
            A     Q+  +++G    V                      +   +    +   N  + 
Sbjct: 251 EANFRETQLARMRQGQPVRVTVDALPGRTFTGTVQSLGPASGVSYSVIAPHNATGNFTKI 310

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAE 412
            +   V + +       + + +  G   +
Sbjct: 311 VQRLPVRIALDPQQDGADQLRV--GMSVQ 337


>gi|153832840|ref|ZP_01985507.1| secretion protein, HlyD family [Vibrio harveyi HY01]
 gi|148870974|gb|EDL69864.1| secretion protein, HlyD family [Vibrio harveyi HY01]
          Length = 373

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 76/241 (31%), Gaps = 24/241 (9%)

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              R  QL++   +        +   +     +L++    + +   +    + + +    
Sbjct: 76  INVRPNQLVEEGDELAVLDKSDYEIAVKQAEENLEIAGQNVGAQTASIASAQARLTSAIV 135

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + +     +  + EK  VS++D ++    +  +   +     + +   + +    +E
Sbjct: 136 ERQNTEAQANRVLAMAEKGVVSKSDADKARASLATARANVVNAEADLEKAKQQLGAEGEE 195

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            +   A  L                    L   +   E+  I +P  G +  N S +   
Sbjct: 196 NSQVKAALLA-------------------LEQAQLNLERTVIRAPTQGGV-SNFSLTEGF 235

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           YA   QP+M  V      +I A      + +V  G    +       +  K  K  +  I
Sbjct: 236 YASAGQPIMTFVSTED-IWIEAYFRENSLGNVSIGDEVEI---ALDFVPGKVIKGKVSSI 291

Query: 371 D 371
           D
Sbjct: 292 D 292



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 80/222 (36%), Gaps = 13/222 (5%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +N + N    +K +T   ++ I+ ++ +SI+   +  +  +     +  +V IK   SG 
Sbjct: 15  ENKETNKKDKVKTVTNYLLLFIVVMLGFSIVS--DRIIPVTDNARVKGYIVPIKPQVSGN 72

Query: 67  IKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           +    V     + +G  L   +         +  + +++   ++      I + ++ L  
Sbjct: 73  VLNINVRPNQLVEEGDELAVLDKSDYEIAVKQAEENLEIAGQNVGAQTASIASAQARLTS 132

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              +    E A  +R   + +      S   K      ++    +  +    ++      
Sbjct: 133 AIVERQNTE-AQANRVLAMAEKGVVSKSDADKARASLATARANVVNAEADLEKAKQQLGA 191

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQ 218
           + E  S +  ALL+  Q  L + + +     +  VS   L +
Sbjct: 192 EGEENSQVKAALLALEQAQLNLERTVIRAPTQGGVSNFSLTE 233


>gi|309790836|ref|ZP_07685380.1| RND family efflux transporter MFP subunit [Oscillochloris
           trichoides DG6]
 gi|308227123|gb|EFO80807.1| RND family efflux transporter MFP subunit [Oscillochloris
           trichoides DG6]
          Length = 573

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/341 (13%), Positives = 99/341 (29%), Gaps = 25/341 (7%)

Query: 90  IETTDLIDLKKVSIKNLR--CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            E    +D ++ ++   +       E+ A    + +       ++    +  +   +   
Sbjct: 187 TEAQAELDRQRNALAAAKENARATVEQRANALRDAQAAYSSAYWDYEHVKQYETDPRTGR 246

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLN-----RLDLENKSSLLRALLSSHQKDLTMM 202
           T +       +       + L    S            ++N+ S L    +        +
Sbjct: 247 TLNDAQMRDFADALNRATLNLADAESALNQAQIAYDTAIQNEVSGLATAQARVTSAQANL 306

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE- 261
             L     V   DL +    V ++  EL      Q++      +   +A       L   
Sbjct: 307 DQLLAGAEVD--DLARARADVARAEAELARLTGAQRSGTIAAQQANLDAAQARLQQLTSD 364

Query: 262 -ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
             S DL + +   A   ++L   +   +  T+ +P AGTI      +        Q  + 
Sbjct: 365 PTSSDLARAEARVAQAQAQLDQAQIRLDDATLRAPFAGTIAAVTV-APGETISAQQAPIT 423

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           ++  +    ++  V    I  V  G    V                + +++P+       
Sbjct: 424 LI-DTSRYLVKVTVDEVDIGKVAVGQPVQVLIDALGA---PSLAGQVLRVEPLPKGDSAV 479

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                 Y V L++           L+ G  A     A+  +
Sbjct: 480 TA----YLVTLEVDPAER-----NLKPGMTASATIIAEQRS 511



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 74/236 (31%), Gaps = 4/236 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +++ V+++G +          S  SG + + +V  G Q+  G  LLT +  +    +   
Sbjct: 45  LQLGVAATGSVEPRTQAELAFSGVSGRVAEVRVAEGDQVAAGAVLLTLDSRQLAAEVTAA 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++   +  +   +           V E   + R  Q          T + +       
Sbjct: 105 QANLAVAQADLQALRDGA----TPQQVAEAQAQVRAAQGSLTQTTGSVTDADLRAARAQI 160

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                 +           R   ++  +  +A L   +  L   K         + +  + 
Sbjct: 161 EQARAALAALEAGPKTDARTQAQSSLTEAQAELDRQRNALAAAKENARATVEQRANALRD 220

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
            +  Y S     E++ + +   R    L D    +FA+ L   + +L   +     
Sbjct: 221 AQAAYSSAYWDYEHVKQYETDPRTGRTLNDAQMRDFADALNRATLNLADAESALNQ 276


>gi|323530268|ref|YP_004232420.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1001]
 gi|323387270|gb|ADX59360.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1001]
          Length = 358

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 56/417 (13%), Positives = 114/417 (27%), Gaps = 77/417 (18%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVS-SSGEILNEDNVVEIKSPFSGII 67
           +    P+ LK   + + I +IGL+ W+ +     + + S+ +     +   +     G +
Sbjct: 1   MSSTTPSPLKISRIAAAIIVIGLVAWACVRLFSSASTESTNDAYVTADFTLVAPRVPGQV 60

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V +   +  G  L+  +D              ++ R  + +  + +          
Sbjct: 61  TDVFVNDNEDVKAGQLLVRIDD--------------RDYRAALLSATAEVAAAKASVANF 106

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +    +R+  L+            +  +  ++  R   +  T   +    +L     +  
Sbjct: 107 DAEI-ARQPSLVGQARATLRADEALIGFARANAARYQNLSATGAGTAQEQQLSSSTLAQQ 165

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L          L   +NL         D+ + +R    S L+  E + EQ  +       
Sbjct: 166 LAQQARDQAALLATQQNL---------DVLRTQRDKAASALQHAEAVQEQARL------- 209

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                                                       I +P+ G +   +S  
Sbjct: 210 --------------------------------------NLSYTEIRAPVDGKV-GRRSAR 230

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK----- 362
              +      ++ IVP S    I A     QI +++ G    V       +  +      
Sbjct: 231 VGAFLTPGAAVLAIVPLSNAYVI-ANFQESQITNMRLGEAVRVTVDSLPGVVIRGRVDSL 289

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             A      PI         T+    V +KIT          L  G   E       
Sbjct: 290 APATGVSFAPIAPDNATGNFTKVVQRVPVKITIDHGQSAASALSVGLSVEAEVAVGR 346


>gi|123443105|ref|YP_001007079.1| hypothetical protein YE2891 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332161010|ref|YP_004297587.1| hypothetical protein YE105_C1388 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166200395|sp|A1JSL8|Y2891_YERE8 RecName: Full=UPF0194 membrane protein YE2891; Flags: Precursor
 gi|122090066|emb|CAL12929.1| HlyD family secretion protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318604882|emb|CBY26380.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor protein YbhG [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325665240|gb|ADZ41884.1| hypothetical protein YE105_C1388 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330859403|emb|CBX69748.1| UPF0194 membrane protein YE2891 [Yersinia enterocolitica W22703]
          Length = 328

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 96/255 (37%), Gaps = 21/255 (8%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS---QNDLNQQERIVY 224
           +  ++    N    + + +LL+A     ++++  +++   +   +    +   ++++ ++
Sbjct: 81  VNALKQAQANVQSAQAQLALLKAGY--REEEIAQVRSEVSQREAAFSYADSFLKRQQGLW 138

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTIL 283
            +       +   +            +  + A YL     +++ Q +   A   ++L   
Sbjct: 139 ANKATSANELENARTARNQAQANLQASKDKLAQYLSGNRPQEIAQAEANLAQSEAELAQA 198

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +   +  T+LSP  GT++  ++         S  +  +   +   ++RA V+ + +    
Sbjct: 199 QLNLQDTTLLSPSGGTVLT-RAVEPGTILSASNTVFTLS-LTDPVWVRAYVSERHLGQAI 256

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAF 398
            G    V F       +K +   I  + P       S +  +L+T   Y + + ITD   
Sbjct: 257 PGTEVEV-FT--DGRPDKPYHGKIGFVSPTAEFTPKSVETPDLRTDLVYRLRIIITDA-- 311

Query: 399 SDNNIELRNGFPAEV 413
              +  LR G P  V
Sbjct: 312 ---DESLRQGMPVTV 323


>gi|309790288|ref|ZP_07684856.1| efflux transporter, RND family, MFP subunit [Oscillochloris
           trichoides DG6]
 gi|308227676|gb|EFO81336.1| efflux transporter, RND family, MFP subunit [Oscillochloris
           trichoides DG6]
          Length = 618

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/340 (10%), Positives = 93/340 (27%), Gaps = 30/340 (8%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            +       ++  ++S+++ R  +   K+  +          +  +     +     +  
Sbjct: 200 IDLATAQSSVEQARLSLESQRVSLSAAKTKAESAVTTAANSLRDAQESYSTIYWNNREQE 259

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL- 205
               ++          +L+       +++   L            +   + +L+  +   
Sbjct: 260 RARGELTQSAKDEEAAALRAVENAQENLHQAELAYTQAQQAETIGIQQAEANLSDAEQQL 319

Query: 206 --FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
              +  A +    + +  +    +             L       ++A L   N     S
Sbjct: 320 ADVQSGATASEIASARASLASAKSNLANLQHPASAQDLAMARASVEQARLSLENLTSPAS 379

Query: 264 RD-LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-----P 317
              L   + + A         +   E  T+ +P AG +                      
Sbjct: 380 ASTLASAEASLAQSQVAYAQAKLDLEDATLTAPFAGVVAEVD-------VDPGDDAAVAT 432

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +  I   S    I   ++   I  V  G   T+ F   +D+R       ++ + P+ +  
Sbjct: 433 ITLI--DSSAFVIDLSLSESDIGTVAVGQPVTLSFDALSDLR---ITGEVQSVAPLATVT 487

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            N       Y V +     +F   +  +R G  A      
Sbjct: 488 SNVAT----YTVRV-----SFQATDAAIRAGMSATGAIQT 518



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 81/262 (30%), Gaps = 18/262 (6%)

Query: 49  EILNEDNVVEIKS-----PFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
            +     V  I++     P +G + +  V+ G  ++QG PL   +        ++    +
Sbjct: 70  SVTGSGTVQPIQTRNLTFPLAGTVSEVLVQVGDTVVQGQPLARLDTEDLQMALLQAEANL 129

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              +  +   +    T                   ++R   +                  
Sbjct: 130 KSAQAQVAAAQGEGATANEVAQAQAQLASAQASYEKTRTGDVTAAELAAAQAQVVSAQAQ 189

Query: 157 ISSVY--RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
           +  +    S     T   S+   RL LE++   L A  +  +  +T   N       S +
Sbjct: 190 LDDLLDGASAIDLATAQSSVEQARLSLESQRVSLSAAKTKAESAVTTAANSLRDAQESYS 249

Query: 215 DL----NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            +     +QER   + T   ++        + +  E   +A L +    +  +  ++Q +
Sbjct: 250 TIYWNNREQERARGELTQSAKDEEAAALRAVENAQENLHQAELAYTQAQQAETIGIQQAE 309

Query: 271 RTFADEMSKLTILEKTREQKTI 292
              +D   +L  ++       I
Sbjct: 310 ANLSDAEQQLADVQSGATASEI 331


>gi|302039216|ref|YP_003799538.1| RND-type efflux transporter, membrane-fusion protein [Candidatus
           Nitrospira defluvii]
 gi|300607280|emb|CBK43613.1| RND-type efflux transporter, membrane-fusion protein [Candidatus
           Nitrospira defluvii]
          Length = 439

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 88/252 (34%), Gaps = 25/252 (9%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +  K + L A  +S  ++  ++ ++ +K   ++    +      K+TL    N+  Q+ 
Sbjct: 112 QVSGKIAKLYADFNSIVREGQVLASIDQKPYQAKVSQAKAALKSAKATLAKARNMRAQRR 171

Query: 240 MLRHINELYDEANLEFANYL-------KEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +         E      + L       ++    ++ +Q       + L+  E      TI
Sbjct: 172 LELDRMAALREQQFVAQSDLDLSRTNYRDAEAQVDLSQAQVDQAKATLSSAELDLGYTTI 231

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +SP+ GT+V              Q   L  I        + A V+   I  V +G +A  
Sbjct: 232 ISPVNGTVVSRNVEEGQTVVASFQTPTLFVIAQDLTRMQVIANVSESDIGGVSEGTSADF 291

Query: 351 RFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           R   Y       F  ++ ++   P+  Q          Y+VI+ + +       ++L+ G
Sbjct: 292 RVDAYPRE---FFHGVVTQVRNAPVSIQNVVT------YDVIISVENPE-----LKLKPG 337

Query: 409 FPAEVLFTAKNT 420
             A +      T
Sbjct: 338 MTANITIVTART 349



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 56/184 (30%), Gaps = 31/184 (16%)

Query: 12  NHPASLKRMTLLS----IIGIIGLITWSIL----------------LPIEISVSSSGEIL 51
            HP   +RM LL      + I+ L  W                    PI   V+++G + 
Sbjct: 43  PHPGRTRRMPLLLATVGFLAILALGLWHWWPNDPLAGHYKTLPVDRGPITSLVTATGAVN 102

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL----------KKV 101
              +V  + S  SG I K   +  S + +G  L + +       +               
Sbjct: 103 PVISVQ-VGSQVSGKIAKLYADFNSIVREGQVLASIDQKPYQAKVSQAKAALKSAKATLA 161

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
             +N+R     E   +  L  +  V +   +       D   +   + ++V     +   
Sbjct: 162 KARNMRAQRRLELDRMAALREQQFVAQSDLDLSRTNYRDAEAQVDLSQAQVDQAKATLSS 221

Query: 162 RSLK 165
             L 
Sbjct: 222 AELD 225


>gi|300718024|ref|YP_003742827.1| multidrug resistance protein A [Erwinia billingiae Eb661]
 gi|299063860|emb|CAX60980.1| multidrug resistance protein A [Erwinia billingiae Eb661]
          Length = 390

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 88/262 (33%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +    L +  L   Q DL   + L   N + +
Sbjct: 98  QQAFEKAQTALATTVRQTHQLIINGKQYQATIDLQKTALEQAQSDLKRREPLGAANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            DL      V  +  +L     +       I       +LE    +K+ + +L       
Sbjct: 158 EDLQHARDAVATAKAQLDVATQQYNANQAMILN----TSLENQPAVKQSAAELRDAWLAL 213

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A              +  ++SP+ G +   +S    +    + PL+ IVP +   ++ A 
Sbjct: 214 A--------------RTEVVSPVDGYVSR-RSVQVGSQISSTTPLLAIVPANN-LWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+  V+ G +ATV    Y D     +   +  +D          P  +   N ++ 
Sbjct: 258 FKETQLAGVRIGQSATVVSDIYGDDV--VYHGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++     + + + +
Sbjct: 316 VQRLPVRIELDPKEVAQHPLRI 337



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/175 (10%), Positives = 53/175 (30%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK------- 104
              N  ++ +  SG + K   +N   + +G  L+T +  +     +  + ++        
Sbjct: 57  VAGNQAQVMAQVSGSVNKVWFDNTDYVKKGDVLVTLDKTDAQQAFEKAQTALATTVRQTH 116

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    ++ +D      +  +   + RE      L               +     +
Sbjct: 117 QLIINGKQYQATIDLQKTALEQAQSDLKRREPLGAANLIGREDLQHARDAVATAKAQLDV 176

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
             +        +    LEN+ ++ ++        L + +          VS+  +
Sbjct: 177 ATQQYNANQAMILNTSLENQPAVKQSAAELRDAWLALARTEVVSPVDGYVSRRSV 231


>gi|72382586|ref|YP_291941.1| secretion protein HlyD [Prochlorococcus marinus str. NATL2A]
 gi|72002436|gb|AAZ58238.1| Secretion protein HlyD [Prochlorococcus marinus str. NATL2A]
          Length = 357

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 56/291 (19%), Positives = 108/291 (37%), Gaps = 43/291 (14%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLT 200
           L + +S+   +  + I++   SL   +T    +  N+ +++  K   +   +   + D  
Sbjct: 29  LSQDNSSNKDITEFTIAAERGSLPGLITASGELKANKSVNVSPKRQGILDEIFVEEGDQ- 87

Query: 201 MMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                 +K   +++ D    E  +     E++ N   QK   +    L++E  +    Y 
Sbjct: 88  -----VKKGDLIAKMDFGDLEFRID----EIKANYETQKASFKRREMLFNEGAISAEEY- 137

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ----- 314
                  E+ +  F    ++   LE    + +I +P  G I    +     +        
Sbjct: 138 -------EEYKNKFLKSKARFKQLEVEENEISIRAPFRGVITSRYAV-PGAFVTPTTSAS 189

Query: 315 -----SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                      IV  S+   I AKV    I  +K G  A++R   + D   K+FKA++ K
Sbjct: 190 SSREGGATSSSIVKLSQGLEIVAKVPESDIGRIKTGQDASIRVDAFPD---KRFKAVVSK 246

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           I P   + +N       +EV L        +   +LR G  +++ F    T
Sbjct: 247 ISPSAIKNNNVTS----FEVTL-----LLENRPEDLRLGMTSDINFQTGAT 288



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 71/190 (37%), Gaps = 8/190 (4%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
               +    +   +++SGE+   +  V +     GI+ +  VE G Q+ +G  +   +  
Sbjct: 42  FTIAAERGSLPGLITASGELK-ANKSVNVSPKRQGILDEIFVEEGDQVKKGDLIAKMDFG 100

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    ID  K + +  +          + L N+  +  + +E  + + L    ++     
Sbjct: 101 DLEFRIDEIKANYETQKASFKRR----EMLFNEGAISAEEYEEYKNKFLKSKARFKQLEV 156

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +     I + +R +      +   ++      + S    A  SS  K    ++ + +   
Sbjct: 157 EENEISIRAPFRGVITSRYAVPGAFVTPTTSASSSREGGATSSSIVKLSQGLEIVAK--- 213

Query: 211 VSQNDLNQQE 220
           V ++D+ + +
Sbjct: 214 VPESDIGRIK 223


>gi|238927948|ref|ZP_04659708.1| efflux transporter, RND family, MFP subunit [Selenomonas flueggei
           ATCC 43531]
 gi|238884183|gb|EEQ47821.1| efflux transporter, RND family, MFP subunit [Selenomonas flueggei
           ATCC 43531]
          Length = 370

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 70/214 (32%), Gaps = 27/214 (12%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLEQNQRTFADEMSKL 280
           +    L    +E K            A     +YL+ I      DLE     +    S L
Sbjct: 88  QVVATLDGKDYEAKRDQAQYRVTNTRAKYNRMSYLESIGAKSKSDLEDAAYNYDTAQSTL 147

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPK 337
                   +  I +PI+G +V     + +   Q S     +M+I        I+AKV   
Sbjct: 148 EEANSDANETIITAPISGVVVGEPKNAGTMAVQGSDNPTVIMRIA-DLSKKQIKAKVDET 206

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----------Y 386
            I  ++ G +AT     + D   K F A + KI         +  +             Y
Sbjct: 207 DIGSIRIGQSATFSVDAFTD---KTFTARVSKISQTDVTNSWDTSSSSSSSASSSASVIY 263

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           Y V L + D     +N+ L     A V+    + 
Sbjct: 264 YYVTLDVDD----PDNL-LLPAMTARVVIDTADK 292



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 31/74 (41%), Gaps = 1/74 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +  + I+ +V ++G I   D+V E+ S  +  I    V+    +  G  + T +  +   
Sbjct: 42  AARMNIKSTVEATGTIRPVDSV-EVSSKITARISSVLVKENDTVTAGQVVATLDGKDYEA 100

Query: 95  LIDLKKVSIKNLRC 108
             D  +  + N R 
Sbjct: 101 KRDQAQYRVTNTRA 114


>gi|86356832|ref|YP_468724.1| multidrug resistance efflux system protein [Rhizobium etli CFN 42]
 gi|86280934|gb|ABC89997.1| probable multidrug resistance efflux system protein [Rhizobium etli
           CFN 42]
          Length = 396

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 96/316 (30%), Gaps = 19/316 (6%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E +   ++   Y  +        +Q+L        +   +          +L      ++
Sbjct: 73  ESTDDAYVKADYTAVAPKVAGYIKQVLVNDNDQVKSGQVLARIDDRDFQAALSQARADVK 132

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +      +++ + +L ++++   +  +   +   +          +       +     +
Sbjct: 133 AAEAAITNIDAQIALQQSVIEQAKATVDASQASLDFAVSDAARSARLITNGAGTQSRAEQ 192

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +   +      + E    A +   N +       EQ         +     E       I
Sbjct: 193 SKSARDQAATAV-ERDRAALVAAENKVPVFQSQREQAIAQRERAAAAAHQAELNLSYTNI 251

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++ + GT+   +S     Y      LM +VP   +  + A     Q+ HV+ G    ++ 
Sbjct: 252 VAAVDGTV-GARSIRVGQYVTSGTQLMAVVPLHAVYVV-ANFKETQLTHVRPGQPVEIKV 309

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDNN 402
             + D      +  ++ + P    +      +  T  + +      V + I D A S   
Sbjct: 310 DSFPDT---AIRGHVDSVSPASGLEFSLLPPDNATGNFTKIVQRIPVKIVIDDEALSG-- 364

Query: 403 IELRNGFPAEVLFTAK 418
             LR+G   E     K
Sbjct: 365 -LLRSGMSVEPEIDTK 379



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 44/123 (35%), Gaps = 1/123 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK+  V +  Q+  G  L   +D +    +   +  +K     I    + +    +  
Sbjct: 93  GYIKQVLVNDNDQVKSGQVLARIDDRDFQAALSQARADVKAAEAAITNIDAQIALQQSVI 152

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  +   ++ +  L DF     +  +++   G  +  R+ + K  R ++      D    
Sbjct: 153 EQAKATVDASQASL-DFAVSDAARSARLITNGAGTQSRAEQSKSARDQAATAVERDRAAL 211

Query: 185 SSL 187
            + 
Sbjct: 212 VAA 214


>gi|146342512|ref|YP_001207560.1| putative multidrug resistance protein A [Bradyrhizobium sp. ORS278]
 gi|146195318|emb|CAL79343.1| putative multidrug resistance protein A (drug efflux transporter,
           EmrA-like) [Bradyrhizobium sp. ORS278]
          Length = 447

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/364 (14%), Positives = 105/364 (28%), Gaps = 86/364 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I++    + S + +G  +   +D +    +D  +  I                    
Sbjct: 138 SGHIQEIVPRDNSVVHKGDVIFRIDDGDYKIAVDAARTKIATQEA--------------- 182

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                            I+ + R +  + + +     N    E 
Sbjct: 183 --------------------------------TIARIGRQVAAQQSAVEQAQANLTSSEA 210

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             ++ RA L     D    + L  K   S     Q E    +    +R           +
Sbjct: 211 --AMKRAGL-----DYERQQALSSKGFASHATFEQSEAARDQGQAAVRAAQAAFDAARDN 263

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +     +     A   +                 + L   E+  E   + +P+ GT   N
Sbjct: 264 VEVTKAQQAEAQAQLAE---------------LKTSLAKAERDLEFAIVRAPVDGT-FSN 307

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +  S+ ++    Q L  +VP     +I A     Q++ ++ G   T++   Y       F
Sbjct: 308 RLVSTGDFVAVGQRLGNVVPLDD-VFIDANYKETQLKRIRPGQPVTIKVDAYGAR---GF 363

Query: 364 KAIIEKIDP----IISQQDNNLQTQEYYE------VILKITDLAFSDNNIELRNGFPAEV 413
           K +++ I P    + +    +  T  + +      V +++       N   LR G    V
Sbjct: 364 KGVVDSISPAAGSVFTLLPPDNATGNFTKIVQRLPVRIRVPKEVARQN--LLRAGMSVYV 421

Query: 414 LFTA 417
               
Sbjct: 422 TVDT 425


>gi|127514334|ref|YP_001095531.1| secretion protein HlyD family protein [Shewanella loihica PV-4]
 gi|126639629|gb|ABO25272.1| secretion protein HlyD family protein [Shewanella loihica PV-4]
          Length = 358

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 97/280 (34%), Gaps = 11/280 (3%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            H    ++     S+ YR+   +      +  ++ +L+  S+ +    +  ++    + +
Sbjct: 63  QHVEQGQLLAELESNQYRAKVSQSQAS--LQSSQAELQTLSAKVTLQQAIIRQAAAGVAS 120

Query: 205 LFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              +   ++  L +    +   Y S  E+ +      + + H++E       + A  L  
Sbjct: 121 AEAEKIRAEQQLKRTTKLKHRDYSSQDEVDQATAAFDSAVGHLDEAKAALVAKQAE-LAV 179

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           ++  L Q+Q   A   + L + E       I +P +G I    + +   Y Q  Q L  +
Sbjct: 180 LNAQLNQSQSQVAQAKAGLELAEIQLADTQIRAPFSGVIGKRGALT-GQYVQPGQSLYSL 238

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFKAIIEKIDPIISQQDNN 380
           VP     +I A     QIQH++ G    V    +          ++        S     
Sbjct: 239 VP-DGAVWITANFKETQIQHMQPGQLVQVHLDAFPDQSFTGVIDSLAPASGAKFSLLPAE 297

Query: 381 LQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             T  + ++   + +      D+   +  G  A V    +
Sbjct: 298 NATGNFTKIVQRIPVRIRLDLDDQTNIVPGLSAVVKVDTR 337


>gi|146312804|ref|YP_001177878.1| efflux pump membrane protein [Enterobacter sp. 638]
 gi|145319680|gb|ABP61827.1| efflux pump membrane protein [Enterobacter sp. 638]
          Length = 390

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 85/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     L   + + R   +N   L+    + +  L+  Q DL     L   N + +
Sbjct: 98  QQAFEKAQTELASSVRQTRQSMINSKQLQASIDVQKTALAQAQSDLNRRVPLGTANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVASAQAQLDVAIQQYNANQAMILGTNLEDQPAVKQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         ++  I+SP+ G +   +S         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALQRTKIVSPMTGYVSR-RSVQPGAQISPTTPLMAVVPANN-LWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ H++ G TAT+    Y D    ++   +  +D          P  +   N ++ 
Sbjct: 258 FKETQLAHMRIGQTATIVSDIYGDDV--EYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++     +D+ + +
Sbjct: 316 VQRLPVRIELDQKQLTDHPLRI 337



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 54/160 (33%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  +  + +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVQKGDVLVTLDPTDAQQAFEKAQTELASSVRQTR 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L     LG  +    +   +   +V  +      
Sbjct: 117 QSMINSKQLQASIDVQKTALAQAQSDLNRRVPLGTANLIGREELQHARDAVASAQAQLDV 176

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 177 AIQQYNANQAMILGTNLEDQPAVKQAATEVRNAWLALQRT 216


>gi|58582403|ref|YP_201419.1| transport protein [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 413

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 91/322 (28%), Gaps = 28/322 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L+         +     K  V +       + LL    + +    +     I++    + 
Sbjct: 90  LQADSVAVAPRVSGYVTKVLVSDNQIVEAGQPLLQIDDRTYQATLQQAEAAIAARQADIV 149

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                + +     L    + +   A L   Q ++     L    A +       +  + +
Sbjct: 150 AATANVSAQESALLQARTQVTAATATLRFAQAEVKRFAPLAASGADTHEHQESLQHDLAR 209

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  +      + K     I                     LEQ Q       +       
Sbjct: 210 ARAQYDAAQAQAKAGESQIQAS---------------RAQLEQAQAGVKQATADADQARV 254

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             E   + S I G +  +++     +       M IVP   L  + A     Q+  ++ G
Sbjct: 255 AVEDTRLTSRIHGRV-GDKTVQVGQFLGAGTRTMTIVPQQSLYLV-ANFKETQVGLMRPG 312

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLA 397
             A +     + ++       +E + P    Q         T  + +V+    ++I  LA
Sbjct: 313 QPAEIEVDALSGVK---LHGKVESLSPGTGSQFALLPPENATGNFTKVVQRVPVRIRVLA 369

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             +    L  G   EV    ++
Sbjct: 370 GDEARKVLVPGMSVEVTVDTRS 391



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 60/217 (27%), Gaps = 6/217 (2%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE- 113
           + V +    SG + K  V +   +  G PLL  +D      +   + +I   +  I    
Sbjct: 93  DSVAVAPRVSGYVTKVLVSDNQIVEAGQPLLQIDDRTYQATLQQAEAAIAARQADIVAAT 152

Query: 114 ----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                     L  +  V       R  Q         +      +    S+   L     
Sbjct: 153 ANVSAQESALLQARTQVTAATATLRFAQAEVKRFAPLAASGADTHEHQESLQHDLARARA 212

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +  +        E++    RA L   Q  +       ++  V+  D  +    ++    +
Sbjct: 213 QYDAAQAQAKAGESQIQASRAQLEQAQAGVKQATADADQARVAVED-TRLTSRIHGRVGD 271

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
               + +          +  + +L      KE    L
Sbjct: 272 KTVQVGQFLGAGTRTMTIVPQQSLYLVANFKETQVGL 308


>gi|312131070|ref|YP_003998410.1| efflux transporter, rnd family, mfp subunit [Leadbetterella
           byssophila DSM 17132]
 gi|311907616|gb|ADQ18057.1| efflux transporter, RND family, MFP subunit [Leadbetterella
           byssophila DSM 17132]
          Length = 460

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 75/270 (27%), Gaps = 49/270 (18%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             +     +    +   S   + L   + +    + L+E+  VS  D    E  +  +  
Sbjct: 110 AGVNQSKASAEQAKAAISRAESQLVRLEAEFKRQQKLYEEKVVSLADFQMAEANLLTARQ 169

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +L       +     IN                                + L    +   
Sbjct: 170 DLASAKASYEAARFGINSS-----------------------------EAALKDASENLR 200

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           +  I +P++G +                     L++I   +    +R  V    I  V  
Sbjct: 201 KTNIYAPVSGIVSKLAVELGERVVGTSQMAGTELLRIANLNN-MEVRVNVNENDIIRVDL 259

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPI-------ISQQDNNLQTQEYYEVILKITDLA 397
           G T  V    Y     KKFK ++ ++          +S   N+ +    +EV +KI   +
Sbjct: 260 GDTVIVDVDAYTAQN-KKFKGVVTRVANTAIGSGGSLSAASNSTEAVTEFEVRIKILPES 318

Query: 398 FSD-------NNIELRNGFPAEVLFTAKNT 420
           + D            + G  A V       
Sbjct: 319 YMDLIDHARGRKYPFKPGMTATVDIITDKK 348



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 73/190 (38%), Gaps = 9/190 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  SVS+SG+I  E  V  I     G I    ++ G  + +G  LL  +      +++
Sbjct: 48  GNLTQSVSASGKIQPEVEVK-ISPDVPGEIIALYIKEGDSVQKGQLLLKIQPENYVSVVE 106

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  +   +   +  K+A+    ++   LE  F+ +++   + +          F    
Sbjct: 107 RSRAGVNQSKASAEQAKAAISRAESQLVRLEAEFKRQQKLYEEKVVSLAD-----FQMAE 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +++  + +   +   S    R  + +  + L+    + +K   +   +     VS+  + 
Sbjct: 162 ANLLTARQDLASAKASYEAARFGINSSEAALKDASENLRKT-NIYAPV--SGIVSKLAVE 218

Query: 218 QQERIVYKST 227
             ER+V  S 
Sbjct: 219 LGERVVGTSQ 228


>gi|330816698|ref|YP_004360403.1| Efflux pump membrane protein [Burkholderia gladioli BSR3]
 gi|327369091|gb|AEA60447.1| Efflux pump membrane protein [Burkholderia gladioli BSR3]
          Length = 410

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 86/273 (31%), Gaps = 32/273 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R ++ N      + +L  + LS  Q DL     + +  AVSQ
Sbjct: 95  QVALQQAEANLAQTVRQVRGLFANDDQYRAQVALRESDLSKAQDDLRRRLAVVQTGAVSQ 154

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 155 EE------------------ISHARDAVKAAQASVDAAQQQLASNRALTANTTIADHPNV 196

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 197 LAAAAKVRDAYLNNARNTLPAPVTGYVAK-RSVQVGQRVAPGSPLMSVVPLN-AVWVDAN 254

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ H++ G    +    Y      K+   +              P  +   N ++ 
Sbjct: 255 FKEVQLTHMRIGQPVELTADIYGSSV--KYHGKVVGFSAGTGSAFSLLPAQNATGNWIKV 312

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   V + I       + + +      +V   
Sbjct: 313 VQRLPVRIVIDPKELEQHPLRIGLSMQVDVDIK 345



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 43/134 (32%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +     ++   +  G PL+  +  +    +   + ++      + 
Sbjct: 54  VNGNVVQITPQVTGTVIAVNADDTQTVTAGAPLVVLDPADAQVALQQAEANLAQTVRQVR 113

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
              +  D    +  + E      ++ L   L    +     +  ++   +V  +      
Sbjct: 114 GLFANDDQYRAQVALRESDLSKAQDDLRRRLAVVQTGAVSQEEISHARDAVKAAQASVDA 173

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 174 AQQQLASNRALTAN 187


>gi|238796287|ref|ZP_04639797.1| hypothetical protein ymoll0001_35480 [Yersinia mollaretii ATCC
           43969]
 gi|238719980|gb|EEQ11786.1| hypothetical protein ymoll0001_35480 [Yersinia mollaretii ATCC
           43969]
          Length = 382

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 49/353 (13%), Positives = 113/353 (32%), Gaps = 40/353 (11%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+   ++ +G  L+  ++++T   I+  K  I++    I  E+SA    +++
Sbjct: 63  GGKLITRHVQESQRVQKGDILMALDEVDTNISIERLKAVIRSQEASIRLEESATRIASDE 122

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             + E +   + E++   L    ++          +   S    +++          L+N
Sbjct: 123 TKLTELSSWRKIEEIQATLSAARASEELARTDFNRAAKLSHTGSVSQ--------SMLDN 174

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             S L    S+                     + Q ER +  + +       ++      
Sbjct: 175 ARSTLTQTHSA---------------------VVQAERQLASAMIGTTPEQMKRLAEKAS 213

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              +  +A       +K     L+Q +   A   ++L  LE    + T+ +P  G I+  
Sbjct: 214 AQGMTLQAIANSRESIKNRENVLDQLRAQLAQSQAELKQLEVNHSRLTLTAPADGKILKL 273

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK-- 361
             +          P + +   +   Y+   V    +   + G   T + P      +   
Sbjct: 274 L-YEPGEIVPTGAPAVLL--ETDHRYVDIYVNENMVSAYQPGTAVTAQVPALDTQVKGVV 330

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           +F         +   ++        Y+V +        +   +L  G   EV 
Sbjct: 331 RFANAAPSFSDLRMTRERGQADLTSYQVRIYT------EVKPQLITGMTLEVD 377


>gi|330985666|gb|EGH83769.1| HlyD family secretion protein [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 385

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/388 (12%), Positives = 112/388 (28%), Gaps = 87/388 (22%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PIE + ++      +     I    SG + +  V++   +  G  L+  +D        
Sbjct: 64  SPIESTENAQ----VKGQTTLIGPQLSGYVYEVPVQDFQFVKAGDLLVRLDD-------R 112

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + +  +      +  +K++L     +    E     RE +L + + +   + +       
Sbjct: 113 IYRQRLDQAIAQLAVQKASLANNLQQRRSAEATIGQREAELQNSIAQSRKSAA------- 165

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                                                   DL   + L    +VS+++L 
Sbjct: 166 ----------------------------------------DLRRNQALVTDGSVSKSEL- 184

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                V ++          +   +  I              L+ +  +    + + A+  
Sbjct: 185 ----DVTRAADAQANAAVAEARAVLQIA----------REDLQTVIVNRGSLEASVANAQ 230

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + + +     +   I++P  G +          Y      LM +VP  +     A +   
Sbjct: 231 AAIELARIDLDNTRIVAPRDGQLGQIGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKET 287

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKI 393
           Q+ HV+ G   +            +    +++I P    +      +  T  + ++  +I
Sbjct: 288 QMAHVRLGQPVSFTVDALDGH---EMHGHVQRISPAAGSEFSLLPADNATGNFVKISQRI 344

Query: 394 TDLAFSDNNIE----LRNGFPAEVLFTA 417
                 D +      LR G    V    
Sbjct: 345 PVRIVVDADQPMLEHLRPGMSVVVSIDT 372


>gi|295101339|emb|CBK98884.1| RND family efflux transporter, MFP subunit [Faecalibacterium
           prausnitzii L2-6]
          Length = 548

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 134/384 (34%), Gaps = 38/384 (9%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK------------- 104
            +KS  +G +     E G  I +G  L T +  +  + +   ++S++             
Sbjct: 89  TVKSLVTGTVLTADFELGDSIEKGDILYTIDISDVENNLASAQLSVEQAQRNYDDAADMQ 148

Query: 105 NLRCHIDTEKSALDFLNNKY-DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI-SSVYR 162
           N+R  I  E S+            +     R+  ++     + +  ++ F  G  + V  
Sbjct: 149 NVRTRISGEVSSFAVAAGDAVQAGQTVATIRDTSVMLLAVDFPAAEAQSFVAGQAAQVMP 208

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
               +        ++  +    +SL+   ++    +   +     + AV+Q +       
Sbjct: 209 DTTFETLNGTIRSVSGANPAGDASLMTCTVTIAVPNAGSLTT--AQAAVAQVNGVSSLNS 266

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS---- 278
            + +              +  +         +    L+   +DL++  +  AD +     
Sbjct: 267 AHFTYQREETVAAAASGTVSELCVKEGSTVRQDDVILRITGKDLDKQTKNAADSLRSAEL 326

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK-IVPHSKLTYIRAKVTPK 337
           +++  EKT    TI +PI+GTIV  +  +  +    +   M+ +     ++++  K+   
Sbjct: 327 QMSSAEKTISHYTIDAPISGTIVDKKVKA-GDKLSANDTAMQNLCTIYDMSHLEMKLNVD 385

Query: 338 Q--IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           +  I+ +K G    +             K +I  I  +++    N  T   Y V ++I D
Sbjct: 386 ELKIRSLKVGQEVDITADAVPGETY---KGVISSI--LVAGTTANGSTS--YPVTVRIDD 438

Query: 396 LAFSDNNIELRNGFPAEVLFTAKN 419
           +       EL  G  A    T  +
Sbjct: 439 MG------ELLPGMNATAKITTAS 456


>gi|167629659|ref|YP_001680158.1| hlyd family secretion protein [Heliobacterium modesticaldum Ice1]
 gi|167592399|gb|ABZ84147.1| hlyd family secretion protein [Heliobacterium modesticaldum Ice1]
          Length = 406

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 102/320 (31%), Gaps = 46/320 (14%)

Query: 103 IKNLRCHIDTEKSALDFLNNKYDV-LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           +K  R  +    +    L  K ++ L    + +  ++   +G+  +    +     + + 
Sbjct: 40  VKAERADLSNVLTFSGTLAAKEELKLVPKGQGKVARINAEVGQRVNAGDILLELDNADIQ 99

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L      +     +      +  + R  L   ++    +K+LF+  A S++D +  + 
Sbjct: 100 ARLDAANAGVDVNKASLERARLQLEMNRIALDDARRHYDRVKSLFDAGAASKSDYDAAKS 159

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +  +      +     +    +N+                              ++++ 
Sbjct: 160 ALETAEKRCASDEVSVASAQAMLNQS-----------------------------LAQVR 190

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
             +   E   + SPI+G +          Y   + P   +V H     ++A +T   +  
Sbjct: 191 QTQVDLENAVLRSPISGIVSARNVN-VGEYLSNTAPAFTVV-HIDTVEVKADLTESDVNA 248

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           V+ G    V+     +     FK  I KI P   ++         + V + +      + 
Sbjct: 249 VRPGQEVDVKVAAAGET---PFKGRIAKISPAADEKAKT------FPVWITVD-----NK 294

Query: 402 NIELRNGFPAEVLFTAKNTT 421
           +  L+ G  AE      + T
Sbjct: 295 DYILKPGMFAEFQLPTAHKT 314



 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 62/159 (38%), Gaps = 12/159 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFS-GIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +    +   ++ SG +  ++ +  +  P   G + +   E G ++  G  LL  ++ +  
Sbjct: 42  AERADLSNVLTFSGTLAAKEELKLV--PKGQGKVARINAEVGQRVNAGDILLELDNADIQ 99

Query: 94  DLI-------DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY- 145
             +       D+ K S++  R  ++  + ALD     YD ++  F++      D+     
Sbjct: 100 ARLDAANAGVDVNKASLERARLQLEMNRIALDDARRHYDRVKSLFDAGAASKSDYDAAKS 159

Query: 146 -HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              T  K       SV  +  M    +  +   ++DLEN
Sbjct: 160 ALETAEKRCASDEVSVASAQAMLNQSLAQVRQTQVDLEN 198


>gi|282900683|ref|ZP_06308625.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
 gi|281194483|gb|EFA69438.1| Secretion protein HlyD [Cylindrospermopsis raciborskii CS-505]
          Length = 402

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 108/337 (32%), Gaps = 55/337 (16%)

Query: 44  VSSSGEILNEDNVVEIKSPF---SGIIKKFQVENGSQILQGTPLLTFED-IETTDLIDLK 99
           V++ G +  +  +  + +P       ++K  VE G Q+  G  L   E+   +   +   
Sbjct: 65  VTALGRLQPQGEITYLSAPNSINGVRVEKLLVEEGKQVQAGETLAYLENYERSKAAVKQA 124

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              +  ++  +   K+     +                                   ++ 
Sbjct: 125 FNKLLIVKSRLAQVKAGAKVGDVNSQ----------------------------KAVVTR 156

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +Y  L+ ++T                + ++A + +  K+    + L++  A+S   L+ +
Sbjct: 157 LYSQLEGEVTTQ----------TATINRIQAEVENATKESDRYQKLYQDGAISAAILDTK 206

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
              +  S  +L E     ++    +     EA     +  +  + D+   Q       + 
Sbjct: 207 LLQLKTSQQKLMEAKATLQSSKNTLENQIQEAKARLDSIKEVRNVDVALAQSEVESAETA 266

Query: 280 LTILEKTREQKTILSPIAGTIVYNQ-----SFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           +   +   +   I SPI   I+            S +A+  +             + A+V
Sbjct: 267 IQQAKADHDLTYIKSPIDARILKIHAKNGEIIGISGFAELGKT--------SPMNVIAEV 318

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               IQ VK G  A +    ++D      K I  ++D
Sbjct: 319 YQTDIQKVKIGQKAVITSGAFSDKIRATVKEIGWQVD 355


>gi|150007010|ref|YP_001301753.1| RND family efflux transporter MFP subunit [Parabacteroides
           distasonis ATCC 8503]
 gi|255015953|ref|ZP_05288079.1| RND family efflux transporter MFP subunit [Bacteroides sp. 2_1_7]
 gi|256841915|ref|ZP_05547420.1| efflux transporter [Parabacteroides sp. D13]
 gi|298377436|ref|ZP_06987389.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           3_1_19]
 gi|301308851|ref|ZP_07214803.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           20_3]
 gi|149935434|gb|ABR42131.1| efflux transporter, MFP component, RND family [Parabacteroides
           distasonis ATCC 8503]
 gi|256736231|gb|EEU49560.1| efflux transporter [Parabacteroides sp. D13]
 gi|298265850|gb|EFI07510.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           3_1_19]
 gi|300833375|gb|EFK63993.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           20_3]
          Length = 416

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 106/354 (29%), Gaps = 91/354 (25%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---------NEDNVV-- 57
            K++ P     +  + ++G I     +  L ++    S G +           +  V   
Sbjct: 12  QKKHIPYVAGGVLFVILLGWIIFGDHASTLKVDARGISIGNVTREQFNDFFRMDGQVQPI 71

Query: 58  -EIK--SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             ++      GI+++  VE G+Q+ +G  ++   +                         
Sbjct: 72  TVVQLSPEEGGIVQEKVVEEGAQVKKGDIIVRLSNSNLD--------------------- 110

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
             L  LN + ++ EK    R  Q+     K  +   K+             M + R R  
Sbjct: 111 --LQILNAEAELAEKQNFLRNTQVTMEQDKLTNQMEKL----------QYDMDMNRARRS 158

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
           +  +                        + L+++N +++ D  +      K   EL    
Sbjct: 159 FNQQ------------------------EQLYKENLIAKEDYLK-----AKEDFELASQK 189

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           H        I E   + ++     + E+   L   ++       +       +E   + S
Sbjct: 190 HAL------ITERLRQDSISRTIQMDEMEASLANMRKNILLIRER-------KENLNVRS 236

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
            I G  +              Q + +I   S    I A +    I  VK G +A
Sbjct: 237 QIDGE-LGLLDVVLGQSINPGQKIGQINDLSD-YKIEAMIDEHYIDRVKPGLSA 288


>gi|3414725|gb|AAC31387.1| multidrug resistance efflux pump homolog PmrA [Pseudomonas
           aeruginosa PAO1]
          Length = 394

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 86/269 (31%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + ++R ++ N      + +  +  L+  + D    KNL +  A+SQ +
Sbjct: 95  ALQRAEANLAHTVRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQEE 154

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   L  +    +  L     L D+  +     +K  +  L Q     A 
Sbjct: 155 LAHARDALDSAKASLTSS----EQQLNTNRALVDDTQITSHPDVKAAAAQLRQAYLDDA- 209

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        + TI++P+ G +   +S       Q    LM +VP     +I A   
Sbjct: 210 -------------RSTIVAPVTGYVAK-RSVQVGQRVQPGNALMAVVPLD-QIWIDANFK 254

Query: 336 PKQIQHVKKGYTATVRFPHY--ADIREKKFKAI-IEKIDPIISQQDNNLQTQ-----EYY 387
             Q++H++ G    +R   Y           ++ +            N         +  
Sbjct: 255 ETQLKHMRIGQPVEIRSDLYGSDVRYSGTVDSLGVGTGSAFSLLPAQNATGNWIKIVQRV 314

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + I       + + +      +V   
Sbjct: 315 PVRIHIDPQELQKHPMRIGLSMDVKVDLH 343



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 9/143 (6%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            NVV+I     G +     ++G  + +G  L+ F+  +         ++++    ++   
Sbjct: 54  GNVVQITPQIVGTVVSIGADDGDLVRKGQELVRFDPSDAD-------IALQRAEANLAHT 106

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              +  L +  D       +R+  L      Y    +   +  IS     L      + S
Sbjct: 107 VRQVRGLFSNVDGYRAEVATRKVALAKAEADYKRRKNLADDGAISQ--EELAHARDALDS 164

Query: 174 IYLNRLDLENKSSLLRALLSSHQ 196
              +    E + +  RAL+   Q
Sbjct: 165 AKASLTSSEQQLNTNRALVDDTQ 187


>gi|325288333|ref|YP_004264514.1| secretion protein HlyD family protein [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324963734|gb|ADY54513.1| secretion protein HlyD family protein [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 339

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 62/413 (15%), Positives = 129/413 (31%), Gaps = 92/413 (22%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVS-SSGEILNEDNVVEIKSPFSGII 67
           +  +    L    L++++     + W    P + +   +SG I  E   VE+ +   G +
Sbjct: 1   MAEHKKRKLVIAVLVAVLASGSFLVWRYWPPADQNTIMASGTI--ETMKVELNAKNQGTL 58

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           + F ++ G Q+  G  +               ++S  +L    + +   ++   NK++ L
Sbjct: 59  QGFSLKEGDQVKAGQLVA--------------RISRNDLVAQKERDALNVEIARNKWNDL 104

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +     +E                                          R +     ++
Sbjct: 105 QSGATEQE------------------------------------------RKEAGAGVNI 122

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +  L   +KDL   + LF + +++Q ++         +  +L     E K  L      
Sbjct: 123 AQVTLDQAKKDLERAEELFSQGSLAQTEIEAVRNKYSIARNQLA--TAEAKLSLIEEGTR 180

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            D+                 +NQ      +  L   +   E   + SPI G I   ++  
Sbjct: 181 IDQIKA-------------AENQVKLNQAV--LKSSQAVLEDLNLYSPIDGIIQT-KNRE 224

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
           +  +      L  I       +I   V    + ++K G   T          E+ F+  +
Sbjct: 225 NGEFVSLGSNLATIS-DLTKCWINVYVPTTDLPYIKIGGKVTFSVSG----TERVFEGTV 279

Query: 368 EKIDPI-----ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +I         S Q    +    Y+V +   +         L+ G PA+V+ 
Sbjct: 280 AEIASKGEFTPKSIQTAEERANIVYKVKINADNKEGL-----LKPGMPADVVI 327


>gi|332830101|gb|EGK02729.1| hypothetical protein HMPREF9455_00979 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 365

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 111/367 (30%), Gaps = 77/367 (20%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E  +  I S  SG IK+ +      +  G  LL  +D         ++  IK +    
Sbjct: 63  TIEQYITPINSRVSGYIKEVRFTEHQWVNAGDTLLIIDD---------REFKIKEMDA-- 111

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                                   E  L+D         S +                  
Sbjct: 112 ------------------------EAALMDAKSSSSVLSSNIITTS-------------- 133

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
                 N    E      +A L   ++DL   KNL +  +VS+   +Q +      +   
Sbjct: 134 -----ANVTVSEANIEEAKARLWKAEQDLKRYKNLLDAESVSRQQYDQIKSEYDAQSAHY 188

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              + +++++                +   E ++     + T     + L + +      
Sbjct: 189 NALLRQKESL---------------RSTSAEAAKKQGNAEATILRREADLEMAKLNLSYT 233

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +I++P +G +   ++  S    Q  Q +  ++ +     I A    KQI+++  G    +
Sbjct: 234 SIIAPYSGYV-GRRTLESGQLVQAGQTITNLIKNDNKWII-ANYREKQIENIYIGQKVNI 291

Query: 351 RFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNI-E 404
           +    +         AI E      S    +     + ++     ++I     S  ++ +
Sbjct: 292 KVDAISGKTFTGTITAISEATGSKYSMLPTDNSAGNFVKIQQRIPVRIDFEGISPEDMQK 351

Query: 405 LRNGFPA 411
           LR G   
Sbjct: 352 LRAGMMV 358


>gi|329113669|ref|ZP_08242444.1| Putative protein YhiI [Acetobacter pomorum DM001]
 gi|326696932|gb|EGE48598.1| Putative protein YhiI [Acetobacter pomorum DM001]
          Length = 337

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 86/289 (29%), Gaps = 42/289 (14%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  QLL   G   ++   +     +++         +             +    +A L 
Sbjct: 68  RITQLLVQEGDNVTSGQILAQEDKATIQAQYDQTRAQENRATSAAGRASAELVARQAALQ 127

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               +L   + + ++N +S  ++ Q+   V  +   +                       
Sbjct: 128 LAHDELRHAQKMRQQNLISDMEVTQRRTQVETAQAAVNA--------------------- 166

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                    S+ +++        ++++  ++   +  TI +P++G I   +   + +   
Sbjct: 167 --------ASQAVQEALHAKEGAVAQVNQVQTVLDDMTIRAPVSGRI-EYRVIETGSVLP 217

Query: 314 QSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               +  ++ P      +        I ++K G  A +RF            A +  ID 
Sbjct: 218 PGGRVYSMLDPVDPYMTL--FFPTASINNLKVGDEARIRFDGMDM----PVSATVSFIDS 271

Query: 373 IIS-----QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                    +    + Q  Y V L++T          L+ G   E    
Sbjct: 272 QAQFTPKYVETATEREQLVYRVKLRVTADEQKRLGALLKAGMTGEGYIK 320



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/186 (10%), Positives = 53/186 (28%), Gaps = 8/186 (4%)

Query: 12  NHPASLKRMTLLSIIGIIGLITW----SILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             PA +  + +       G   W          +  +  +G +      V +K P  G I
Sbjct: 12  KAPAKITIIAISLFAVAGGAFAWHEHQVAQSVPDGIIYGNGRLEFTRVDVAVKYP--GRI 69

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V+ G  +  G  L   +        D  +      R      +++ + +  +  + 
Sbjct: 70  TQLLVQEGDNVTSGQILAQEDKATIQAQYDQTRAQEN--RATSAAGRASAELVARQAALQ 127

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
               E R  Q +                 + +   ++      ++     +     + + 
Sbjct: 128 LAHDELRHAQKMRQQNLISDMEVTQRRTQVETAQAAVNAASQAVQEALHAKEGAVAQVNQ 187

Query: 188 LRALLS 193
           ++ +L 
Sbjct: 188 VQTVLD 193


>gi|299068851|emb|CBJ40092.1| putative multidrug resistance homolog transmembrane protein (emrA)
           [Ralstonia solanacearum CMR15]
          Length = 363

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 100/329 (30%), Gaps = 28/329 (8%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                   +      ++       S +     + +V +         L     +     +
Sbjct: 28  RPESEASEQSTDDAYVQADSTVIVSQVAGTITRVEVADHQEVQAGAPLASIDERDLRIAA 87

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 I+S   ++     ++              +   A L   + +     NL    +
Sbjct: 88  DNAKAHIASAQATIDGLQAQIARQQSTIEQARAAVAATGANLKLAEANRNRFANLARDGS 147

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            +     Q +            ++    +  +    L                 DLE+ +
Sbjct: 148 GTVQAQQQADAQWDIQRAARERDLAGLHSAEQQTAIL---------------RADLEKAR 192

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++    +       +++P++G +V  +S     YA+  QPL+ +VP     Y+
Sbjct: 193 ASLLSAQAEKATADLNLSYARVIAPVSG-VVAQRSARVGGYARVGQPLLTLVPLD-AVYV 250

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEY 386
            A     Q+ HV+ G  AT+      ++R    K  +E + P      S    +  T  +
Sbjct: 251 EANFRETQLAHVRVGQPATITVDALPNVR---LKGRVESLGPASGVSFSTTPPHNATGNF 307

Query: 387 YEVI----LKITDLAFSDNNIELRNGFPA 411
            +++    ++I      ++   LR G   
Sbjct: 308 TKIVQRLPVRIRIEPGQEDARLLRVGMSV 336



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 59/167 (35%), Gaps = 17/167 (10%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +   I S  +G I + +V +  ++  G PL + ++ +     D  K  I + +  ID
Sbjct: 43  VQADSTVIVSQVAGTITRVEVADHQEVQAGAPLASIDERDLRIAADNAKAHIASAQATID 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS----------------KVFNY 155
             ++ +    +  +    A  +    L       +   +                  ++ 
Sbjct: 103 GLQAQIARQQSTIEQARAAVAATGANLKLAEANRNRFANLARDGSGTVQAQQQADAQWDI 162

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLE-NKSSLLRALLSSHQKDLTM 201
             ++  R L    +  +   + R DLE  ++SLL A       DL +
Sbjct: 163 QRAARERDLAGLHSAEQQTAILRADLEKARASLLSAQAEKATADLNL 209


>gi|254446406|ref|ZP_05059882.1| efflux transporter, RND family, MFP subunit [Verrucomicrobiae
           bacterium DG1235]
 gi|198260714|gb|EDY85022.1| efflux transporter, RND family, MFP subunit [Verrucomicrobiae
           bacterium DG1235]
          Length = 443

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 84/261 (32%), Gaps = 49/261 (18%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                ++          ++ +S  +A +   + DL  + NLFEK   +Q  +++ E  + 
Sbjct: 91  DRLEAQVLQQEAALRANKSNASEAKARMLQTELDLKRLNNLFEKGFATQEQVDEGETNLE 150

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            S    +  +   +     + E                                      
Sbjct: 151 ISQASYQATLSRIEQQEMQLKE------------------------------------AN 174

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ----PLMKIVPHSKLTYIRAKVTPKQIQ 340
            +  + T  +PI+GTI    S          Q     +M+ V       IR  V+   I 
Sbjct: 175 DSLAKATTFAPISGTITSLSSELGDRVVGTGQFEGTEIMR-VADLSQMEIRVDVSESDIV 233

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            VK G  AT+      D    +FK  + +I    +  +N+      ++V +++ + +   
Sbjct: 234 QVKIGDPATIEIEALPDQ---EFKGEVTEIANSATGGNNSSDQLTTFQVKVRLIEPSA-- 288

Query: 401 NNIELRNGFPAEVLFTAKNTT 421
              ++R G  A      K  T
Sbjct: 289 ---QIRPGMTATADIKTKTVT 306



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 69/194 (35%), Gaps = 2/194 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +V+++G++  E  V  I S  +G I +  V++G  + +G  L++         +  +
Sbjct: 42  ITSTVTATGKVYPEIEV-TISSEVAGEIVELGVKDGQTVEKGDVLVSVNPDRLEAQVLQQ 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES-REEQLLDFLGKYHSTCSKVFNYGIS 158
           + +++  + +    K+ +         L   FE     Q     G+ +   S+       
Sbjct: 101 EAALRANKSNASEAKARMLQTELDLKRLNNLFEKGFATQEQVDEGETNLEISQASYQATL 160

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           S     +M+L                S  + +L S     +           +   DL+Q
Sbjct: 161 SRIEQQEMQLKEANDSLAKATTFAPISGTITSLSSELGDRVVGTGQFEGTEIMRVADLSQ 220

Query: 219 QERIVYKSTLELRE 232
            E  V  S  ++ +
Sbjct: 221 MEIRVDVSESDIVQ 234


>gi|103487563|ref|YP_617124.1| secretion protein HlyD [Sphingopyxis alaskensis RB2256]
 gi|98977640|gb|ABF53791.1| secretion protein HlyD [Sphingopyxis alaskensis RB2256]
          Length = 371

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/427 (11%), Positives = 111/427 (25%), Gaps = 93/427 (21%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
                  R    +   M  L +  + G   W +   +     S+     + + V + +  
Sbjct: 29  PAADTAARPGWRTRLIMFGLPLALVAGGAGWWL---LSGGSVSTDNAYVQMDKVSVAAEV 85

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I +  V +G Q+ +G  L   +       +     +I   R  +    +  +     
Sbjct: 86  GGRITEVAVRDGEQVAKGQLLFRIDSEPYALNVAQATAAIDAARVEVGNLAAGANT---- 141

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                                  S          +   +++ E 
Sbjct: 142 ---------------------------------------SAVEIAAAREEVRFAQVNFER 162

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +++L+    ++          L +           +ER+       +             
Sbjct: 163 QAALMEKGFTTRAAYDASRHALAQ----------ARERVRQAEAAAVEARTRLAAGPASG 212

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           IN   + A ++ A     ++R                          ++ +P AG +   
Sbjct: 213 INPQVEAARVQRAQAEVNLAR-------------------------TSVRAPSAGRVAQA 247

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--- 360
                        P + +V  +   ++ A      +  ++ G  A +RF  Y  ++    
Sbjct: 248 DRLQVGQAMVAGLPALTLV-DTAHPWVEANFKETDLADMRVGQRAEIRFDAYPGLKVRGH 306

Query: 361 ----KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                        + P  +   N ++  +   V +   +    D    +  G  AEV   
Sbjct: 307 VLMIGAGTGSEFSVLPAQNATGNWVKVTQRVPVRIAFDEKPARD----MIAGLSAEVTVF 362

Query: 417 AKNTTLA 423
               T+A
Sbjct: 363 TGGGTVA 369


>gi|23010423|ref|ZP_00051117.1| COG1566: Multidrug resistance efflux pump [Magnetospirillum
           magnetotacticum MS-1]
          Length = 422

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/295 (10%), Positives = 87/295 (29%), Gaps = 30/295 (10%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R+  ++  L       +       ++   S   ++ R       ++             +
Sbjct: 136 RKGDVIARLDDGDYRLALKAAQDKAATQESTIARIGRQAEAAQAQVLQSAAQVDAARADA 195

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
                        + + V+++ L+Q +    ++   ++           +++ L      
Sbjct: 196 VRAAADYARATQMQSDYVAKSRLDQAKADRDRTDASVKSAEAALAAARANVDVL------ 249

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                         + +   A+  + +    +  +   I +P  G +V N++  +  Y  
Sbjct: 250 ---------RAQQREAESLAAELRTAVDRARRDVDFAVIHAPFDG-VVGNKAVEAGAYVS 299

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               +  +VP      + A     Q+  V+ G    +    Y D         +E + P 
Sbjct: 300 PGSRIAALVPL-TSVRVDANFKETQLARVRPGQEVHIHVDAYPDR---DIVGTVESLSPA 355

Query: 374 I----SQQDNNLQTQEYYEVILKIT-----DLAFSDNNIELRNGFPAEVLFTAKN 419
                S    +  T  + +++ ++          +   + LR G    V    ++
Sbjct: 356 SGSVFSLLPPDNATGNFTKIVQRLPVRVHVPEDVAREGL-LRPGLSVVVKVDTRD 409


>gi|331265470|ref|YP_004325100.1| competence factor transport protein ComB [Streptococcus oralis Uo5]
 gi|326682142|emb|CBY99758.1| competence factor transport protein ComB [Streptococcus oralis Uo5]
          Length = 449

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 55/444 (12%), Positives = 144/444 (32%), Gaps = 40/444 (9%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R +     R+ L   + ++ L+ +++    EIS+S+   +     +  I+S  + +I   
Sbjct: 14  RRYHNFSSRVILPMSLLLVFLLGFAVFAEKEISLSTRATVEPSRIIANIQSTSNQLIVAN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            +E    + QG  L+ ++       ++     ++ L+      K  L +L +        
Sbjct: 74  YLEENKLVKQGELLVQYQQGAEAVQVEAYASQLEMLKDQ----KKQLGYLQSSLKEGSDQ 129

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           F   ++     + + + + +      +S    ++  +            +L +++     
Sbjct: 130 FPEADKFGYQEMFRDYISQANGLRSNVSQQNANISSQNAAASQSQAEIGNLISQTEEKIR 189

Query: 191 LLSSHQKDLTMMKNL----------------------FEKNAVSQNDLNQQERIVYKSTL 228
              + +  +     L                       +   ++Q D   Q   +  S  
Sbjct: 190 DYKTAKSAIEKGDQLDSQNPAYSFYQTYKNQGEEDPQAKSQVIAQVD--AQIAQLESSLA 247

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             R           +   L  +     + +L ++ ++L    +   +  S   +     +
Sbjct: 248 TYRVQYAGSGAQQAYATGLDSQLESLKSQHLVKVGQELTLLDQKILEAESGKKVQGGILD 307

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKG 345
           +  I +   G +  N   S S    +   L ++ P       T + A ++ K +  VK G
Sbjct: 308 KGKITASEDGVLHLNPETSESTMVAEGTLLAQLYPSLEKEGKTKLTAYLSSKDVARVKIG 367

Query: 346 YTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
            +  VR+    D + +    + I  ID   ++ +       ++++  +      S+    
Sbjct: 368 DS--VRYTTTNDAKNQIFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAAT 419

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIH 428
           LR G    +       +  +    
Sbjct: 420 LRYGLEGRLQMITGKKSYLRYFWD 443


>gi|258623957|ref|ZP_05718910.1| Multidrug resistance protein mdtN [Vibrio mimicus VM603]
 gi|258583751|gb|EEW08547.1| Multidrug resistance protein mdtN [Vibrio mimicus VM603]
          Length = 344

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 104/299 (34%), Gaps = 27/299 (9%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           + +   V++ A E     L    G+  +    +F     ++   L      +  + +N+ 
Sbjct: 66  VTSDPVVIKAAEEGIVGSLNLVTGQSVTEQQVLFEIVNDALSGELDFIRQEIAQLNVNQE 125

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFE----KNAVSQNDLNQQERIVYKSTLELRENIH 235
           +  +  +L       +   +  ++  +E    K  VS  D      + Y +  EL     
Sbjct: 126 ESFDYHTLTIENAQKNADQIQQIRKRYEFYKAKGQVSDVDYAAIINLAYSAQNELNSRHI 185

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
              +   +  E             + ++  + Q +R+    M +L + +   +Q  + SP
Sbjct: 186 ALDDAQNNYQE-------------RRLAGSISQARRSL---MKELVVKQTQLDQLNVRSP 229

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G +V           ++  P+M I   + + ++ A + PK +   + G  A V+FP  
Sbjct: 230 YDGRVVDIPVV-EGQQVEKGDPVMVIA-KNVMPHVTAYLNPKYLDIAQFGNKAKVKFPD- 286

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYY-EVILKITDLAFSDNNIELRNGFPAEV 413
                      +E +  + +Q     + Q  Y +V L   +       IE   G   EV
Sbjct: 287 GKTYSATVSQAVEIVSKLPTQLTKPFEGQPAYMKVTLAFDEEVGQSRWIE---GMTVEV 342



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 72/218 (33%), Gaps = 14/218 (6%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
             M+   KR        + L  +I  ++ +  +     + +   +    +   + V IK+
Sbjct: 20  KVMYGQAKRGGYRLRWYLILALVISPLLAMGYYLYRDKVLVIAPA----IVTSDPVVIKA 75

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              GI+    +  G  + +   L    +   +  +D  +  I  L  + +          
Sbjct: 76  AEEGIVGSLNLVTGQSVTEQQVLFEIVNDALSGELDFIRQEIAQLNVNQEESFDYHTL-- 133

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               +      + + Q +    +++    +V +   +++          + S ++   D 
Sbjct: 134 ---TIENAQKNADQIQQIRKRYEFYKAKGQVSDVDYAAIINLAYSAQNELNSRHIALDDA 190

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +N     R   S  Q   ++MK L     V Q  L+Q 
Sbjct: 191 QNNYQERRLAGSISQARRSLMKELV----VKQTQLDQL 224


>gi|206559877|ref|YP_002230641.1| putative multidrug resistance transport protein [Burkholderia
           cenocepacia J2315]
 gi|198035918|emb|CAR51810.1| putative multidrug resistance transport protein [Burkholderia
           cenocepacia J2315]
          Length = 404

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 88/273 (32%), Gaps = 32/273 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 96  QVALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 155

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 156 EE------------------ISHARDAVKAAQASVDAAQQQLASNRALTANTTIASHPNV 197

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        +  + +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 198 MAAAAKVRDAYLANARNVLPAPVTGYVAK-RSVQVGQRVSPGNPLMSVVPLN-AVWVDAN 255

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q++H++ G    +    Y       +   +              P  +   N ++ 
Sbjct: 256 FKEVQLKHMRIGQPVEMTADIYGSSVT--YHGKVVGFSAGTGSAFSLLPAQNATGNWIKV 313

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   V +++       + + +      +V   
Sbjct: 314 VQRLPVRIELDPKDLDKHPLRIGLSMQVDVDIK 346



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 55  VNGNVVQITPQVTGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L   L   +  +   +  ++   +V  +      
Sbjct: 115 GLFVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASVDA 174

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 175 AQQQLASNRALTAN 188


>gi|170078070|ref|YP_001734708.1| membrane-fusion protein [Synechococcus sp. PCC 7002]
 gi|169885739|gb|ACA99452.1| Membrane-fusion protein [Synechococcus sp. PCC 7002]
          Length = 459

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/370 (11%), Positives = 113/370 (30%), Gaps = 76/370 (20%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +++  G +   + V    +     I    V+ G  +  G  L   ++      +   
Sbjct: 79  IAKTMAIVGTVTPAEIVAVTAARSGLQITNLLVDEGDNVQAGQLLAQLDNATLQAELRQA 138

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +   +  +   ++                 +R E+L     + +   + +       
Sbjct: 139 QAQVAQAQARLAELRAG----------------ARSEELARAQEQVNQARAALGRSQ--- 179

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                                         A L   ++ L   + LFE  A++ + L++ 
Sbjct: 180 ------------------------------ADLKLSEQRLQRNQELFEAGAIAADTLDET 209

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                 +   + +N    +   + + EL     LE     +                 ++
Sbjct: 210 RTRRDGAAASVSQNQATLREAEQRLQELRRGPRLETLAQAE----------AQLQQAQAQ 259

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           ++++     +  + +P  G I+  +     + +  ++PL  ++  +    + A +   Q+
Sbjct: 260 VSLVTTRLRETQVRAPRPGKILE-KFAQLGDLSTANEPLFNLL-EAGQLELEANIPETQL 317

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             V+ G T  +           +    I++I P + +Q          +  LKI+     
Sbjct: 318 NQVEIGQTVAI---TSDRDPNLQLTGQIQEIVPTVDRQSR--------QATLKIS----L 362

Query: 400 DNNIELRNGF 409
               +L+ G 
Sbjct: 363 PPGTDLKPGM 372


>gi|307711238|ref|ZP_07647659.1| transport protein comB [Streptococcus mitis SK321]
 gi|307616889|gb|EFN96068.1| transport protein comB [Streptococcus mitis SK321]
          Length = 449

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/438 (10%), Positives = 145/438 (33%), Gaps = 34/438 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R +     R+ +   + ++ L+ ++     E+S+S+   +     +  I+S  +  I   
Sbjct: 14  RRYHTFSSRVIVPMSLLLVFLLGFATFAEKEMSLSTRATVEPSRILANIQSTSNNRILVN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            +E    + +G  L+ +++       +     +  L+      K  L++L       E  
Sbjct: 74  HLEENKLVKKGELLVQYQEGAEGVQAEAYASQLDMLKDQ----KKQLEYLQKSLQEGENH 129

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           F   ++       + + + +       S    ++  +            +L +++     
Sbjct: 130 FPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKIR 189

Query: 191 LLSSHQKDLTMMKNLFEKNAV------SQNDLNQQERIVYKSTLELRENIHEQKNML--- 241
              + +  +    +L  +N         ++   +  +   ++  ++   + + ++ L   
Sbjct: 190 DYQTAKSAIETGASLASQNLAYSLYQSYKSQGEENPQAKAQAVAQVEAQLSQLESSLTTY 249

Query: 242 ------RHINELY-----DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                   I + Y      +     + +L ++S++L    +   +  S   +     ++ 
Sbjct: 250 RVQYAGSGIQQAYASGLSSQLESLKSQHLAKVSQELTLLDQKILEVESGKKVQGNLLDKG 309

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYT 347
            I +   G +  N   S S    +   L ++ P         + A ++ K +  +K G +
Sbjct: 310 KITASEDGVLHLNPETSDSTMVAEGTLLAQLYPSLEKEGKAKLTAYLSSKDVARIKVGDS 369

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
                  +    +    + I  ID   ++ +       ++++  +      S+   +LR 
Sbjct: 370 VRYT-TTHDAKNQIFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQTEKLRY 422

Query: 408 GFPAEVLFTAKNTTLAQE 425
           G    +       +  + 
Sbjct: 423 GVEGRLQMITGRKSYLRY 440


>gi|325288423|ref|YP_004264604.1| efflux transporter, RND family, MFP subunit [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324963824|gb|ADY54603.1| efflux transporter, RND family, MFP subunit [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 369

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 80/259 (30%), Gaps = 21/259 (8%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +    ++  +LT   +    +     +      LLS  ++DL++   L + N     +  
Sbjct: 56  AEQSAAVSSQLTGTVTTLNIKEGQAVRKG--EVLLSLDKRDLSLQLQLAQSNYRKSVEAV 113

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            Q +I Y    +      E         + Y++   +      +                
Sbjct: 114 NQAKISYDDAQKAYNRYQELYQTGSVSQQDYEQITSKLNLAKSQYETA---QGSGLDAAQ 170

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + +  +E   ++  + SP+ G I      +         P++ +V   +   +   ++  
Sbjct: 171 NSIQTIENNLDKADLKSPLDGVIASCNV-TPGESVTTGTPIVSLV-SEQNLILNGNISES 228

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            + ++K G    +                I  I P+       + T +++ V +K+    
Sbjct: 229 MVNYLKVGQKVDIITDSVPGTTY---SGTIIFISPVS------VSTGQFFPVKIKV---- 275

Query: 398 FSDNNIELRNGFPAEVLFT 416
             + N  LR G        
Sbjct: 276 -ENANHTLRIGMTGSASIK 293



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 62/160 (38%), Gaps = 3/160 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    I  ++S SG +  E +   + S  +G +    ++ G  + +G  LL+ +  + + 
Sbjct: 39  AGSQKISGTISVSGILDAEQSA-AVSSQLTGTVTTLNIKEGQAVRKGEVLLSLDKRDLSL 97

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + L + + +     ++  K + D     Y+  ++ +++      D+  +  ++   +  
Sbjct: 98  QLQLAQSNYRKSVEAVNQAKISYDDAQKAYNRYQELYQTGSVSQQDY--EQITSKLNLAK 155

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
               +   S             N LD  +  S L  +++S
Sbjct: 156 SQYETAQGSGLDAAQNSIQTIENNLDKADLKSPLDGVIAS 195


>gi|134093785|ref|YP_001098860.1| cobalt-zinc-cadmium resistance protein CzcB [Herminiimonas
           arsenicoxydans]
 gi|133737688|emb|CAL60733.1| Cobalt-zinc-cadmium resistance protein CzcB (Cation efflux system
           protein CzcB) [Herminiimonas arsenicoxydans]
          Length = 526

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 93/286 (32%), Gaps = 25/286 (8%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
              G+ + T  ++   G+  +        T ++ I   RL+ +    ++  L        
Sbjct: 183 QEEGRVNMTDEQLKQNGVKIMTAGPARIKTNLQLIGEIRLNEDRTVHVVPRLAGIVDSVR 242

Query: 200 TMMKNLFEKN----AVSQNDLNQQ--ERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               +  +K      +S   L+ Q  E +  +  L L    +E++  L       ++  L
Sbjct: 243 ANAGDQVKKGQVLAVISSQSLSDQRSELLAAQKRLSLARTTYEREKSLWEEKISAEQDYL 302

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +    ++E     +  Q+  A   +  +       Q  I SPI G I      +  +  +
Sbjct: 303 QARAAMQEAQIMAQSAQQKLAALGA--SPSSSNLTQYEIRSPIDGVITDKNIST-GSVTK 359

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           +   +  +V      ++   V  + I  +K G   TV+   +           +  I  +
Sbjct: 360 EDANIF-VVSDLSTVWVDLTVRAEDIGALKVGQKGTVKSSAFDGQDV----GAVSYIGAL 414

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + +Q          +  + +     +   +  R G P  V   A  
Sbjct: 415 VGEQTRTA------KARIVLA----NPKGLW-RPGLPVNVNLVAGE 449



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 4/85 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDF-L 120
           GI+   +   G Q+ +G  L        +D       + K L   R   + EKS  +  +
Sbjct: 236 GIVDSVRANAGDQVKKGQVLAVISSQSLSDQRSELLAAQKRLSLARTTYEREKSLWEEKI 295

Query: 121 NNKYDVLEKAFESREEQLLDFLGKY 145
           + + D L+     +E Q++    + 
Sbjct: 296 SAEQDYLQARAAMQEAQIMAQSAQQ 320


>gi|148553376|ref|YP_001260958.1| secretion protein HlyD family protein [Sphingomonas wittichii RW1]
 gi|148498566|gb|ABQ66820.1| secretion protein HlyD family protein [Sphingomonas wittichii RW1]
          Length = 375

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/329 (12%), Positives = 92/329 (27%), Gaps = 35/329 (10%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +     +R  +      +        V + A     + L     + +          +++
Sbjct: 67  RTDNAYVRGRVTIISPQVSGYVTSVPVQDFAEVKAGQVLATIDDRIYRARVAQAEANVAA 126

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
              SL       RS  +     +      RA L   + D+     L    ++S  + +Q 
Sbjct: 127 QEASLANSTQAQRSREVATASQDAAIVNARAQLVRAEADMRRADALIADGSISARERDQT 186

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
              +  +   +R+                  A       ++ +               ++
Sbjct: 187 RAALLAAQAGVRQAEA---------------ARAIGTQDVRTVLVGRGGLTAAVEGARAQ 231

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI---RAKVTP 336
           L +     +   I +P+AG +      +   +      LM +VPH          A+   
Sbjct: 232 LRLARIDLDNTVIRAPVAGQLSEIGVRN-GAFVTAGTQLMFLVPHDAWVVANFKEAQ--T 288

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILK 392
           +    ++ G +A+ +       +       +E I P    +      +  T  + +V  +
Sbjct: 289 RD---MRVGQSASFKVDALGGAK---LTGHVENIAPAAGSEFAVLKADNATGNFVKVAQR 342

Query: 393 ITDLAFSDNN----IELRNGFPAEVLFTA 417
           I+     D        LR G   E     
Sbjct: 343 ISVRIRIDPGQELARRLRPGMSVEAKIHT 371



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/187 (10%), Positives = 49/187 (26%), Gaps = 3/187 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               V  I    SG +    V++ +++  G  L T +D      +   + ++      + 
Sbjct: 73  VRGRVTIISPQVSGYVTSVPVQDFAEVKAGQVLATIDDRIYRARVAQAEANVAAQEASLA 132

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
               A           + A  +   QL+          + + +  IS+  R         
Sbjct: 133 NSTQAQRSREVATASQDAAIVNARAQLVRAEADMRRADALIADGSISARERDQTRAALLA 192

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
               + + +                +          + A +Q  L + +         + 
Sbjct: 193 AQAGVRQAEAARAIGTQDVRTVLVGRGGLTA---AVEGARAQLRLARIDLDNTVIRAPVA 249

Query: 232 ENIHEQK 238
             + E  
Sbjct: 250 GQLSEIG 256


>gi|103488591|ref|YP_618152.1| secretion protein HlyD [Sphingopyxis alaskensis RB2256]
 gi|98978668|gb|ABF54819.1| secretion protein HlyD [Sphingopyxis alaskensis RB2256]
          Length = 379

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/419 (11%), Positives = 112/419 (26%), Gaps = 60/419 (14%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSS-SGEILNEDNVVEIKSPFSG 65
             L+       K + +L+++ +   I W     +  +    +       +  ++ +  SG
Sbjct: 12  DALETYGAKRRKLLRILALVVLAAAILWGAWYFLTQAGRVHTDNAYVGADSAQVTALVSG 71

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +K  +V     + +G  L+  +D +    +   + +++  R                  
Sbjct: 72  PVKDVRVSGTQAVKRGDILVILDDADQRIALADAEAALRLAR------------------ 113

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                                                +      R+ +   +      + 
Sbjct: 114 -----------------------------QRYGQADANADAARARVAARGADVAQARARL 144

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A +   + +L   +++    AVS  +L      V ++              +    
Sbjct: 145 RDAEASVERARAELARRESIAGTGAVSAEELTAARAAVKQAHA----ARDLAAAAIAAAE 200

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                A+ +       +           A   +++        +  I +P+ G +   Q 
Sbjct: 201 ATRGSASGDLGAAEAVVRGTTVDTAPEVAAAAARVEKARLDLARTVIRAPVDGIVTNRQV 260

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY--ADIREKKF 363
                      P+M IVP     Y+ A     Q + ++ G    +   +Y    +   K 
Sbjct: 261 -QVGQRIAAGAPIMVIVPI-ATAYVDANFKESQFEDIRIGQPVELTSDYYGGDVVYRGKV 318

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAK 418
             I        S       T  + +V+    ++I           LR G   E     +
Sbjct: 319 VGIAGGTGAAFSLIPAQNATGNWVKVVQRLPVRIALDPKQLKEHPLRVGLSMEATIDTR 377


>gi|315180405|gb|ADT87319.1| Multidrug resistance efflux pump [Vibrio furnissii NCTC 11218]
          Length = 335

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/372 (12%), Positives = 102/372 (27%), Gaps = 83/372 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V  +    SG +    V +   +  G PL   +D +    +++ + +I   +  + 
Sbjct: 35  VKADVTLVSPEVSGRVTHLFVRDNQWVKAGDPLFQIDDQDYQANVNISQAAIAVAQSALA 94

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              S +       +  + A E           ++  +  + F   + S   S      + 
Sbjct: 95  NNASRMQLQQVSIEQAKTAIEGASAN-----AQFQQSERQRFQQLLKSASVSQTAFDHQN 149

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                 +  L+N    L A                                   +  +L 
Sbjct: 150 TQAINAKASLKNARLALDA-----------------------------------AHQQLN 174

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E++ +   + +   +  L                                   +  
Sbjct: 175 TLAAEREQLNAQLKQAQSKLALNTIALQ-----------------------------RTM 205

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P+ G I   Q      + Q     + ++P  +  ++ A     Q+ H+  G    VR
Sbjct: 206 VKAPVDGFIANRQV-QEGKFVQPGMGTITLIP--ETVWLNANFKETQLSHLIAGQAVDVR 262

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNI 403
              Y D        +I+ I P    Q         T  + +V+    +KIT         
Sbjct: 263 LDMYPDT---VIAGLIDSITPATGAQFSMIPPQNATGNFVKVVQRVPVKITLTLPDSLKG 319

Query: 404 ELRNGFPAEVLF 415
            +  G  A V  
Sbjct: 320 RVYPGLSAVVSI 331


>gi|24372118|ref|NP_716160.1| HlyD family secretion protein [Shewanella oneidensis MR-1]
 gi|24346008|gb|AAN53605.1|AE015500_4 HlyD family secretion protein [Shewanella oneidensis MR-1]
          Length = 301

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 92/301 (30%), Gaps = 26/301 (8%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DV +     + E L                  ++S    L+    ++   +         
Sbjct: 9   DVTDNQHVRKGELLAQLEDNQFIAKVNQAEASLASAKADLQTLAAKVELQHALISQASAA 68

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A     ++ L+  K L   N  SQ+D++Q +     +   L E         R +
Sbjct: 69  VVAAKADNIRAEQQLSRAKKLKVSNYSSQDDVDQLQAGFDAAAAHLDEAKALLVAKQREL 128

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                             +  L Q +       + L +         + +P +G I   +
Sbjct: 129 AV---------------FNAQLNQARSVVEQADATLALANIQLNDTRVTAPFSGVI-GKR 172

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y Q  Q L  +VP     +I A     QIQH++ G    V    + D   K F 
Sbjct: 173 GAMVGQYVQPGQALYSLVP-DGAVWITANFKETQIQHMQPGQVVQVSLDAFPD---KTFT 228

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAK 418
            +I+ + P    +         T  + +++ +I      +   +  +  G  A V     
Sbjct: 229 GVIDSLSPASGAKFSLLPAENATGNFTKIVQRIPVRIRLELTEDARIVPGLSAVVKVDTS 288

Query: 419 N 419
           +
Sbjct: 289 S 289


>gi|218885800|ref|YP_002435121.1| secretion protein HlyD [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218756754|gb|ACL07653.1| secretion protein HlyD family protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 353

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/381 (13%), Positives = 118/381 (30%), Gaps = 94/381 (24%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           + +SG +      + +    SG+I+   V  G ++ QG  L                   
Sbjct: 49  IVASGRVEPVTKELVLGFETSGVIETLHVAEGDKVEQGQLLA------------------ 90

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              R   + E + LD                                       +++   
Sbjct: 91  ---RLRNEVELAQLD-----------------------------------EARANALAAR 112

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           ++++     +    + + + +      +    +++    + L  ++A+S+ D+ + +R +
Sbjct: 113 MELEKLTNGARPEEKGEAQARERRALKVFEQARQEAARRQRLRFQDAISREDMERAQRDM 172

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +  E               +  + +  L    Y +E   D+ +     A   + + + 
Sbjct: 173 DVAKQE--------------YDAAWQQLKLVEDMYRRE---DVAKAGHQLAAAEAAVRVA 215

Query: 284 EKTREQKTILSPIAGTIVYN--------QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
           E T  +  + SP+AGT++            F+ S                    +R +V 
Sbjct: 216 ESTLRRMDLRSPVAGTVLRVFGEAGEVFSLFAPSPVISVGDI--------AALNVRTEVD 267

Query: 336 PKQIQHVKKGYTATVRFPHYADIRE-KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
            + I  V+ G  A VR   Y   R   K   ++  + P   +  N  +  +   + + IT
Sbjct: 268 ERDIGRVRVGQAAYVRADAYGSERFGGKISRVVLSLTPKTLRTGNPSEPVDRSVLEVLIT 327

Query: 395 DLAFSDNNIELRNGFPAEVLF 415
                D    L +G   +   
Sbjct: 328 ----LDAPGPLVSGLRVDAYI 344


>gi|82702055|ref|YP_411621.1| GAF domain-containing protein [Nitrosospira multiformis ATCC 25196]
 gi|82410120|gb|ABB74229.1| GAF domain protein [Nitrosospira multiformis ATCC 25196]
          Length = 614

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/373 (12%), Positives = 111/373 (29%), Gaps = 27/373 (7%)

Query: 55  NVVEIK-SPFSGIIKKFQVENGSQILQGTPL--LTFEDIETTDLIDLKKVSIKNLRCHID 111
               I   P  G+ K   V N      G+ L  + +       +I L++   + +   ++
Sbjct: 245 QRKTIAYPPIEGLTKGIAVANKDIAKTGSVLSIVLWSAGRGVGVITLERAETRFMLADVE 304

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++    +    D+ E A            G+            +     S +     +
Sbjct: 305 LCQATASLIGPILDMKEDATHW-------IAGRSAQQLRAAAQALVDPRRPSFRYAAAFL 357

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +  +     E +  +    +   +    ++     +  ++Q  +   + + +   L   
Sbjct: 358 LAFLIFISVFEAEYRVPAKAVLEGEVQRAVVAPF--EGYIAQAYIRAGQTVKHGQLLAKL 415

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           ++        + ++E             K     +       A   ++LT++E+   +  
Sbjct: 416 DDRDLLVERQKWLSEFEQNDRKYRDALAKRDRPQVRILVAQVAQAEAQLTLVEEKLARTA 475

Query: 292 ILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           I +P  G +V  + S    +  ++ + L ++ P      I  KV  + I+ V  G   T+
Sbjct: 476 IRAPFDGIVVTGDLSQMFGSPVERGKLLFEVAPLDAYRVI-LKVDERDIRDVAAGQKGTI 534

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
                +       + I   I           +   Y+ V     +         LR G  
Sbjct: 535 VLSGLSAESMP-LEVINISIA-------EAEEGHNYFRV-----EAKLQHAPPRLRPGME 581

Query: 411 AEVLFTAKNTTLA 423
                +    TL 
Sbjct: 582 GVGKISVGERTLI 594



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/187 (10%), Positives = 59/187 (31%), Gaps = 12/187 (6%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
            +   ++  + +  +   E  V +   +  E     +     G I +  +  G  +  G 
Sbjct: 352 YAAAFLLAFLIFISVFEAEYRVPAKAVLEGEVQRAVVAPFE-GYIAQAYIRAGQTVKHGQ 410

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L   +D         + + ++  +   + E++   + +               Q+    
Sbjct: 411 LLAKLDD---------RDLLVERQKWLSEFEQNDRKYRDALAKRDRPQVRILVAQVAQAE 461

Query: 143 GKYHSTCSKVFNYGISSVYRSL--KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            +      K+    I + +  +     L++M    + R  L  + + L A     + D  
Sbjct: 462 AQLTLVEEKLARTAIRAPFDGIVVTGDLSQMFGSPVERGKLLFEVAPLDAYRVILKVDER 521

Query: 201 MMKNLFE 207
            ++++  
Sbjct: 522 DIRDVAA 528


>gi|145300835|ref|YP_001143676.1| multidrug resistance protein A [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142853607|gb|ABO91928.1| multidrug resistance protein A [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 350

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 50/363 (13%), Positives = 107/363 (29%), Gaps = 82/363 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V +   +  G  +   +D          K  +      +   ++  +      
Sbjct: 54  GYISEVLVTDNQAVKAGQLIARLDD-------REYKTRVAEAEADLHLNQATAE------ 100

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                             ++  +   +L+ +R         E K
Sbjct: 101 ----------------------------------NLAATRTQQLSLIRQA-------EAK 119

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +   A     ++ +  +  L +++  SQ+ L++    +  +  + +E     +     +
Sbjct: 120 VASANAEQVRARQQVQRVSQLNQRHYSSQDSLDEVRAGLQVNQAQEQEARAALQAARERL 179

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             L  EA                QNQ   A   ++L           + +P  G I   +
Sbjct: 180 LVLDAEAK---------------QNQARLALSEAQLEQARLELSYTELQAPADGII-GKR 223

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           S  +  Y Q    +  +VP  +  ++ A     Q+ H++ G    V    Y D      +
Sbjct: 224 SLRAGLYVQSGMQVASLVPL-QQVWVEANFKETQLHHMQPGQKVKVILDAYPDQ---PVE 279

Query: 365 AIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            II+ + P           +      T+    V +KI          +L  G   EV+  
Sbjct: 280 GIIDSLAPATGARFALLPPENATGNFTKIVQRVPVKIRIPEPGALAGKLLPGLSTEVIVD 339

Query: 417 AKN 419
            ++
Sbjct: 340 TRD 342


>gi|225378425|ref|ZP_03755646.1| hypothetical protein ROSEINA2194_04093 [Roseburia inulinivorans DSM
           16841]
 gi|225209648|gb|EEG92002.1| hypothetical protein ROSEINA2194_04093 [Roseburia inulinivorans DSM
           16841]
          Length = 460

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/386 (13%), Positives = 119/386 (30%), Gaps = 66/386 (17%)

Query: 40  IEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +  SVS  G I         + S  +  I    V+ G  + +G PL+T +          
Sbjct: 38  LSDSVSLKGTI--AGQSKTNVMSLAAAEITAVNVQVGDIVKEGDPLVTLD---------- 85

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                                        +K  E +  +L   +   ++  +       +
Sbjct: 86  -----------------------------QKDIEKQIAELKTNINNANAVAANDEAQKQN 116

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           S+ ++ + +   + +        +      +  +S  +  +  +KN ++  +     L+ 
Sbjct: 117 SLTQNKQDQQDALDAAQKTIDKAQADVDKYKKKVSECEDYIYYLKNNYKDTSEYDGKLDV 176

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  +  +   L        ++L++ +     A         + S        T  D   
Sbjct: 177 FKSSLETAQNALDSANDNYASVLKNTDRSVASAQNTVDMQKYQTS--------TTRDLKD 228

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +L  L+K     T+ +PI G +      S  +       ++ I   +    +   V    
Sbjct: 229 QLEQLQKQLADCTLSAPIGGVVTAVNV-SVGDKNTAGTTMITI-EDTSSLKVIVNVEEAD 286

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ----QDNNLQTQEYYEVILKIT 394
           I  +++G  ATV      D    + K  + ++  + +Q       +  T   Y   + I 
Sbjct: 287 ILKIQEGMPATVSTDATGDE---EIKGTVTRVVRVKNQSTNTNGTDTNTSSGYSAEITID 343

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNT 420
                  N EL  G  A+     K+ 
Sbjct: 344 -------NTELLVGMSAKAKIVIKDR 362


>gi|282880360|ref|ZP_06289071.1| efflux transporter, RND family, MFP subunit [Prevotella timonensis
           CRIS 5C-B1]
 gi|281305716|gb|EFA97765.1| efflux transporter, RND family, MFP subunit [Prevotella timonensis
           CRIS 5C-B1]
          Length = 417

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 95/312 (30%), Gaps = 78/312 (25%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
              +  VS  G ++    VV+I     G++ +   E GS + +G  ++   +        
Sbjct: 57  AQFDDYVSVDGNVVPI-QVVQISPEEGGVVMERVAEEGSHVRKGDVIVRLNNSNLD---- 111

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                              L+ LN + ++ EK    R  Q+     + ++          
Sbjct: 112 -------------------LEILNAESELAEKQNMLRNTQITMEQDRLNN---------- 142

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            +    L M +   +  Y ++  L+ +    R      ++D  +        AV +N+L 
Sbjct: 143 QNEAAQLSMDVQAKKRTYNHQTALQQEQLNSREEYLKAKEDYEL--------AVKKNELI 194

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            Q     K   +LR                                  +EQ     +   
Sbjct: 195 AQR---LKKDAQLR-------------------------------RAQMEQMNDNLSSMR 220

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
             + ++ + +E   + S I G +               Q +  I   S    + A+V   
Sbjct: 221 RNVELVRQRKEHLNVRSQIDGEVGQLNI-ELGQSISPGQKIGVINDLSD-YKVEAQVDEH 278

Query: 338 QIQHVKKGYTAT 349
            I  V +G TAT
Sbjct: 279 YIDRVHQGLTAT 290


>gi|121595146|ref|YP_987042.1| Fis family transcriptional regulator [Acidovorax sp. JS42]
 gi|120607226|gb|ABM42966.1| transcriptional regulator, Fis family [Acidovorax sp. JS42]
          Length = 466

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 45/151 (29%), Gaps = 14/151 (9%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTY 329
           +  D  + L   E    + +I SPI G ++       +  A   Q   L+ +        
Sbjct: 205 SVQDARAALATDETNVTKASIRSPIDGVVLSRAVEPGNAVAASLQAVTLLTLAEDLTKLR 264

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   V    +  V+ G  AT     Y   R       +                     V
Sbjct: 265 LEVNVDEADVGSVRPGQKATFTVSAYPSRRYPARTTRVAFGSTKTDN------------V 312

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +  IT L   + ++ LR G  A    T+   
Sbjct: 313 VTYITYLEVDNGDLSLRPGMTAAATITSTER 343



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 77/209 (36%), Gaps = 15/209 (7%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I ++V+++G +    +V  I S  SG +++  V+   Q+ +G  L+  +  +    + 
Sbjct: 80  GQITLTVAANGTLQPTRSV-NIGSELSGTVRRVLVDVNDQVKKGQVLVELDTTKLDSQV- 137

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                   LR       +       +  + E        + +  L       +   + G 
Sbjct: 138 --------LRSRASVASAQARLAQAQATMQEARASLSRLEEVARLSGGKVPSAAELDTGR 189

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFEKNAVS---- 212
           ++  R+   +     S+   R  L  +++++ +A + S    + + + +   NAV+    
Sbjct: 190 AAYERAQADEAAARASVQDARAALATDETNVTKASIRSPIDGVVLSRAVEPGNAVAASLQ 249

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNML 241
              L      + K  LE+  +  +  ++ 
Sbjct: 250 AVTLLTLAEDLTKLRLEVNVDEADVGSVR 278


>gi|283851261|ref|ZP_06368544.1| secretion protein HlyD family protein [Desulfovibrio sp. FW1012B]
 gi|283573430|gb|EFC21407.1| secretion protein HlyD family protein [Desulfovibrio sp. FW1012B]
          Length = 371

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 55/382 (14%), Positives = 112/382 (29%), Gaps = 88/382 (23%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +++ G +      + +    +G I++  VE G  + QG  L                   
Sbjct: 61  IAAPGRVEPVSEEMRLGFDIAGKIREVTVEEGDAVRQGQVLARL---------------- 104

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                       + D L  + D  E+   +R+  L   L                     
Sbjct: 105 ------------SADELTARVDAAEQTLAARQAALAKVLAGARD---------------- 136

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                       + R + +      RA+L   + +    + L  K  +S+ + ++ ER  
Sbjct: 137 ------------MERKEAQAAVEEARAVLDVAKVEHERRRQLLSKEVLSKEEADRAEREY 184

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +T    E +   +   R +++   E +++ A   +  +R      +  A++ S     
Sbjct: 185 KVAT----ERLDASRQHFRLVDDPAREEDIKRAMAEEAEARARLAEAQALAEKAS----- 235

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
                   I SPI G ++     +    +      +  V       IRA V  + I  V 
Sbjct: 236 --------IRSPIDGVVLRKHRRAGEMVSVSFDTPVVTVGDISRLRIRADVDERDIGRVA 287

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPII------SQQDNNLQTQEYYEVILKITDLA 397
            G    +    Y D     F   + +I  I+      +            E ++ I   A
Sbjct: 288 VGQKVRLMAEAYGDRT---FTGTVSRIAKILGRKNIRTDDPAEKNDTRILETLIDIDPPA 344

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
                + +      +V      
Sbjct: 345 ELPVGLRM------DVFILLGE 360


>gi|225414550|ref|ZP_03761739.1| hypothetical protein CLOSTASPAR_05773 [Clostridium asparagiforme
           DSM 15981]
 gi|225041929|gb|EEG52175.1| hypothetical protein CLOSTASPAR_05773 [Clostridium asparagiforme
           DSM 15981]
          Length = 597

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/401 (12%), Positives = 119/401 (29%), Gaps = 55/401 (13%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID-TEKSAL 117
           I S   G +     E G Q+ +   L   +       +     S++  R   +   +   
Sbjct: 106 ITSLVEGEVLSANFEEGDQVEKDQVLYEIDKSSMETELTSANNSLERARSSYEDASQDYE 165

Query: 118 DFLNNKYDVLEKAFES-REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--- 173
           D L++      KA ES   ++L    G   S  +K+ +     V       L+   +   
Sbjct: 166 DALSDYSGNTYKATESGYIKELYVNQGDKVSGNTKLADIYSDDVMELRIPFLSGEAAAIG 225

Query: 174 ----IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---------NAVSQNDLNQQE 220
               + +   D   +       +++ ++ LT  + L                      Q 
Sbjct: 226 VGNGVTVTLTDTGEQIVGTVKAVANQERVLTGGR-LVRYVTISVPNPGGLTDTMRATAQI 284

Query: 221 RIVYKST-------------------LELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
                S                    +E+   +  + + +     ++   +      ++ 
Sbjct: 285 GDFAGSEDGTFEASVDTTMNADLSTGVEVEAVLVNEGDYVSKGTPMFRMTSKSADKLIQS 344

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA---QQSQPL 318
               L++ Q +     SKL   + + +  TI +PI+G ++  ++F   +       +  +
Sbjct: 345 YKDALDKAQESMESAQSKLESTQDSYDNYTITAPISGQVIA-KNFKVGDNITKNTSNTTV 403

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +  +           +    I+ VK G    V    +     + F   +  +      + 
Sbjct: 404 LATIYDLSSLTFEMSIDELDIRKVKVGQKVAVTADAF---EGQSFSGTVTNVSL----ES 456

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   Y V + + +        +L  G   + + T + 
Sbjct: 457 TYSNGVSTYPVTVTLDETG------DLLPGMNVDGVITLEE 491


>gi|209543965|ref|YP_002276194.1| secretion protein HlyD family protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209531642|gb|ACI51579.1| secretion protein HlyD family protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 383

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/321 (13%), Positives = 85/321 (26%), Gaps = 75/321 (23%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +   +    SG +    V +   +  G  L+  +  +    +D         +    
Sbjct: 60  VTAHYTVVAPRVSGQVVAVNVTDNQSVKAGQVLVELDPRDYRTALD---------QARAT 110

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E+                                            S+ +     +TR 
Sbjct: 111 LERD------------------------------------------RSLVQDAASAVTRQ 128

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            SI    +    +   +RA L   +++     NL +  A S  +  Q    +      L+
Sbjct: 129 PSIIDESVGAAAR---VRAQLIFARQNAQRYANLAKTGAGSTQENQQSTATLRDMEANLQ 185

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                       +  L                      Q T   + +++   E       
Sbjct: 186 SLEARVAAARAQLPILQARHKA---------------AQATVDLDNARVRQAELNLSYTR 230

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +   G I   +S  + NY      LM +VP     +IRA      ++H++ G    + 
Sbjct: 231 IRALEDGMI-GERSVQTGNYVSPGAALMALVPLD-QIWIRANYRELALRHMRPGQPVRIH 288

Query: 352 FPHYADIREKKFKAIIEKIDP 372
              Y          I++ I P
Sbjct: 289 VDAYD----VTLNGIVDSIPP 305


>gi|296132436|ref|YP_003639683.1| secretion protein HlyD family protein [Thermincola sp. JR]
 gi|296031014|gb|ADG81782.1| secretion protein HlyD family protein [Thermincola potens JR]
          Length = 217

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 60/166 (36%), Gaps = 5/166 (3%)

Query: 254 EFANYLKEISRDLEQ--NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           + A  LKE + +  Q  ++     +     + +   E   I +PI G ++  Q  +    
Sbjct: 52  QIAAKLKEFNIEEGQMVHKDQILGQQEATNLPDANLEMANIRAPITGIVLKKQG-TVGEV 110

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               Q L  ++      YI A +   ++  +K+G  A ++   Y D         I +  
Sbjct: 111 VAPGQMLA-MLADPAKLYISANIDETKVARIKEGQKADIKIDEYGDRNFTGRVVSIGQAT 169

Query: 372 PIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFT 416
                   +     + +V+ K+   +    +++ L+ G  A V   
Sbjct: 170 TATFSLLPSSTGGNFTKVVQKVPVKIQLDQHDVTLKPGTSAVVKIR 215


>gi|312143207|ref|YP_003994653.1| efflux transporter, RND family, MFP subunit [Halanaerobium sp.
           'sapolanicus']
 gi|311903858|gb|ADQ14299.1| efflux transporter, RND family, MFP subunit [Halanaerobium sp.
           'sapolanicus']
          Length = 414

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/356 (12%), Positives = 107/356 (30%), Gaps = 76/356 (21%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G+ ++  ++ G ++  G+ L+  E                                   
Sbjct: 59  GGVAEEVNIDIGDEVEAGSELIKME----------------------------------- 83

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               + +F  ++ Q    L    +   ++ N      Y          R +  +  D + 
Sbjct: 84  ----QDSFLIQKRQAEAALESAEANYDELINGVTEEEY----------RRVKSSYEDAKA 129

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
              +        ++     + LF+ N +S+ D    E     +  +++           +
Sbjct: 130 GLEIAEINYKQAKRAFERSEELFQDNIISKQDFEDAEDAFKNARSQVKSAETNLAVAEAN 189

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++E       E           +  +        + L  +E T  +  I +P  G +   
Sbjct: 190 LDEADRGPREE----------QIRASAAQVKQAEASLDEIEDTLSKTVIRAPFTGLVFE- 238

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +           QP++ ++ +    Y+  ++T   +  + KG    V+    A+  +   
Sbjct: 239 RHIEKGEMIGSGQPIVNLI-NIDQLYVEIEITASAVSRINKGDIVEVK----AETMQHYI 293

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  I  I P    +  +      + V +KI      + +  LR G  A+V      
Sbjct: 294 EGEITNIAPQADPESRS------FLVKVKID-----NPDHSLRPGMFADVRLLKGE 338


>gi|255038989|ref|YP_003089610.1| hypothetical protein Dfer_5251 [Dyadobacter fermentans DSM 18053]
 gi|254951745|gb|ACT96445.1| hypothetical protein Dfer_5251 [Dyadobacter fermentans DSM 18053]
          Length = 352

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 100/312 (32%), Gaps = 22/312 (7%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +     +         E     + +     +K+F      V +   +        +   
Sbjct: 54  LIRYPDTITAPFTLIATEAPRAIVAQTEGELTKLFVKNGQQVLKGQTVAYLESAGDHEQI 113

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           + LE +   +   +S+++ D      +     VS   L + +        +L        
Sbjct: 114 IKLEKEMEQISHAISNNRWDSVRHFPI-----VSYKQLGELQNDFQFFNQKLTGLKSFLV 168

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             + +  +  +   L   N ++E   D  Q+             +++ R++  + +P+AG
Sbjct: 169 GGIYYQKQKGE--ILGVENAIEERKIDFLQSLHAL------CNSIDRWRQKYILTAPVAG 220

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            + ++       Y    Q LM + P         K+    I  +K+G T  ++   +   
Sbjct: 221 KVSFSMPCHEEQYLIAGQELMTVGPTINSFQGIVKIPQPNIGKLKEGQTVLIKLDGFPHR 280

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL--RNGFPAEVLFT 416
                +  + ++        N+    + Y   +++ D   +     L  RNG   +    
Sbjct: 281 EYGMVEGKLAQLS-------NSPGKDDSYWGYIELPDKLKTRYGHTLSYRNGLKGQAEII 333

Query: 417 AKNTTLAQEIIH 428
             +  LA+ ++ 
Sbjct: 334 TADRRLAERLLS 345



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 71/198 (35%), Gaps = 16/198 (8%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S        ++ ++GL TW I  P   ++++   ++  +    I +   G + K  V+NG
Sbjct: 35  SWGITLFFGVMVLLGLGTWLIRYP--DTITAPFTLIATEAPRAIVAQTEGELTKLFVKNG 92

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            Q+L+G  +   E     + I         ++   + E+ +    NN++D +        
Sbjct: 93  QQVLKGQTVAYLESAGDHEQI---------IKLEKEMEQISHAISNNRWDSVRHFPIVSY 143

Query: 136 EQLLDFLGKYHSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           +QL +    +     K+     F  G     +     L    +I   ++D       L  
Sbjct: 144 KQLGELQNDFQFFNQKLTGLKSFLVGGIYYQKQKGEILGVENAIEERKIDFLQSLHALCN 203

Query: 191 LLSSHQKDLTMMKNLFEK 208
            +   ++   +   +  K
Sbjct: 204 SIDRWRQKYILTAPVAGK 221


>gi|162147398|ref|YP_001601859.1| HlyD family secretion protein [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161785975|emb|CAP55556.1| putative secretion protein, HlyD-family [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 383

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 91/321 (28%), Gaps = 75/321 (23%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +   +    SG +    V +   +  G  L+  +  +    +D         R  ++
Sbjct: 60  VTAHYTVVAPRVSGQVVAVNVTDNQSVKAGQVLVELDPRDYRTALD-------QARATLE 112

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            ++S +            +  +R+  ++D                      S+       
Sbjct: 113 RDRSLVQ--------DAASAVTRQPSIID---------------------ESVGAAARVR 143

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
             +   R + +  ++L R    S Q++      L               R +  +   L 
Sbjct: 144 AQLIFARQNAQRYANLARTGAGSTQENQQSTATL---------------RDMEANLQSLE 188

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +   +  L  +   +  A                  Q T   + +++   E       
Sbjct: 189 ARVAAARAQLPILQARHKAA------------------QATVDLDNARVRQAELNLSYTR 230

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +   G I   +S    NY      LM +VP     +IRA      ++H++ G    + 
Sbjct: 231 IRALEDGMI-GERSVQIGNYVSPGAALMALVPLD-QIWIRANYRELALRHMRPGQPVRIH 288

Query: 352 FPHYADIREKKFKAIIEKIDP 372
              Y          I++ I P
Sbjct: 289 VDAYD----VTLNGIVDSIPP 305


>gi|114328388|ref|YP_745545.1| multidrug resistance protein A [Granulibacter bethesdensis CGDNIH1]
 gi|114316562|gb|ABI62622.1| multidrug resistance protein A [Granulibacter bethesdensis CGDNIH1]
          Length = 419

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/355 (11%), Positives = 106/355 (29%), Gaps = 73/355 (20%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++ + +L+++GI+    +      ++  +           V I    +G +    V +  
Sbjct: 44  VRVILILALLGIVAGGVYYWYTHRDLESTDDAY--TSGRAVMISPQVAGYVVDLNVRDNQ 101

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L+  +       +++ +  +  +R                +  LE A ++   
Sbjct: 102 FVHKGEVLVRLDPRPYRAAVEVAEGQLAMVRAQHAA----------THYQLEIAKKNFPA 151

Query: 137 QLLDFLGKYHSTCSKVFNYGIS-SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           QL     +     +++F          S+    T   +I  +   L    + L +  ++ 
Sbjct: 152 QLDAAKAQKQQAEAQLFRAQTDYRRQHSVARAATTQEAIDASTASLRAAQAQLASAQAAI 211

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++ +                              +  NI+E    +  +     +A    
Sbjct: 212 EQAMP-----------------------------VEANINETGQRVDQLAGQIRQAE--- 239

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                  +L   +   E  TI++P  G +         N+ Q  
Sbjct: 240 ----------------------GQLEQAKLNLEYATIVAPQDGWVTKRNV-EKGNFLQTG 276

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +M +V  S   ++ A     Q+  ++ G    +    Y  +     K  ++ I
Sbjct: 277 TQIMSLV--SPEIWVVANFKETQLTRMRPGQKVHISIDAYPWLN---LKGHVDSI 326


>gi|89899669|ref|YP_522140.1| secretion protein HlyD [Rhodoferax ferrireducens T118]
 gi|89344406|gb|ABD68609.1| secretion protein HlyD [Rhodoferax ferrireducens T118]
          Length = 330

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 107/316 (33%), Gaps = 29/316 (9%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++ +L  +I+  +S L F   +  ++E  F   E Q +             +   ++ 
Sbjct: 37  ETNVLSLSGNIEAHESVLGFKTVQSRIVELPFH--EGQWVSKGTVLAVVDDADYRQQMAI 94

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
              +L ++  ++ +   N    E    + +A +   Q D     +L ++   S+  L+Q 
Sbjct: 95  AESNLAVQKQQLEAARQNLYTAERTLLVDQAEVRQRQLDQQRALDLQQQGFTSKATLDQA 154

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +  + +++  L+ +   Q    R I+                        + +     + 
Sbjct: 155 DTALKQASAVLQRDQSLQTAAARAIDV----------------------AKASVHSGEAA 192

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           + +        T+ +P  G +V  Q            P++ +       ++RA +    +
Sbjct: 193 VALARIVLSYTTLRAPFDG-VVNVQQAEVGEIVVPGTPVLTLA-DLDHVWLRAYLNESDL 250

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             V+ G   +V      + R    +  I  I         +++T      ++    +  +
Sbjct: 251 GRVRMGQEVSVSNDSDPNRRY---QGRISFISEKAEFTPKSVETHAERVNLVYRIKIDIA 307

Query: 400 DNNIELRNGFPAEVLF 415
           +   EL  G PA+   
Sbjct: 308 NPEHELVPGMPADARI 323



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/147 (11%), Positives = 48/147 (32%), Gaps = 6/147 (4%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             ++S     I +     G  + +GT L   +D +    + + + ++   +  ++  +  
Sbjct: 57  KTVQS----RIVELPFHEGQWVSKGTVLAVVDDADYRQQMAIAESNLAVQKQQLEAARQN 112

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           L     +  +L    E R+ QL                  +     +LK     ++    
Sbjct: 113 L--YTAERTLLVDQAEVRQRQLDQQRALDLQQQGFTSKATLDQADTALKQASAVLQRDQS 170

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMK 203
            +        + +A + S +  + + +
Sbjct: 171 LQTAAARAIDVAKASVHSGEAAVALAR 197


>gi|90424531|ref|YP_532901.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90106545|gb|ABD88582.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 344

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 106/353 (30%), Gaps = 88/353 (24%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I    VE G+++ +G  +   +                                     
Sbjct: 53  RITAMLVEEGNRVRKGDVVARLDTSR---------------------------------- 78

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                 E R  Q         +   ++ N          +  L + ++   N        
Sbjct: 79  -----LEPRVAQAEAQSDAQRAIVERLRNGSRPEEIAQARANLDQAKADADN-------- 125

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                     Q+     K+L  K AVS+ D +  +  V  +   +R N      ++    
Sbjct: 126 ---------AQRQYERKKSLLSKAAVSEQDFDNAKATVDIAVARVRLNERALDLIVAGPR 176

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                              +++Q +     + ++L  L + R    +L+P    +V ++ 
Sbjct: 177 -----------------REEIKQAEAQLRADDARLAWLRRERADAQLLAPADA-VVRSRL 218

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A   +P++ +       ++RA V    +  ++ G  ATV    +   R   F  
Sbjct: 219 MEPGEMASPQRPVLSLA-VLDPKWVRAYVGEPDLGKLRPGARATVEVDSFPSRR---FDG 274

Query: 366 IIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            I  I P         Q   L+T   Y+V + + D +      +LR G PA V
Sbjct: 275 WIGFISPTAEFTPKEIQTAELRTSLVYQVRVFVHDPSD-----DLRLGMPATV 322


>gi|299141591|ref|ZP_07034727.1| efflux transporter, RND family, MFP subunit [Prevotella oris C735]
 gi|298576927|gb|EFI48797.1| efflux transporter, RND family, MFP subunit [Prevotella oris C735]
          Length = 405

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 92/288 (31%), Gaps = 52/288 (18%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q+   + K +   + V   G           ++++ S   N   ++      +  L+   
Sbjct: 66  QVSGIVSKLYVDYNSVVKKGQVIAELDKSNLMSQLNSAKANLQQMQANLRKAQEDLAYQH 125

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +    K L+ K  VS ND    +                           Y  A+   +
Sbjct: 126 ANFNRYKTLYNKGLVSANDFETAQL-------------------------SYQTASQSVS 160

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS- 315
           +  ++++   E+ +R            +      TI SPI G ++  +S         S 
Sbjct: 161 SVRQQVNAAQEEVKR-----------AQTNLGYATITSPIDGIVLS-KSVEEGQTVAASF 208

Query: 316 --QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               L  I        + A V    I  VK+G   T     Y D     F+  ++++   
Sbjct: 209 STPELFTIAQDLTNMQVVANVDEADIGGVKEGERVTFTVDAYPDET---FQGTVKQVRQE 265

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +  +N +     YEV++        + N++L+ G  A V       +
Sbjct: 266 ATTTNNVVT----YEVVISAP-----NANLKLKPGLTANVTIFTAERS 304



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 58/140 (41%), Gaps = 3/140 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I+ S++++G I    +V  + +  SGI+ K  V+  S + +G  +   +       ++
Sbjct: 43  ANIQSSITATGTIEPVTSV-TVGTQVSGIVSKLYVDYNSVVKKGQVIAELDKSNLMSQLN 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K +++ ++ ++   +  L + +  ++  +  +        DF     S   +  +  +
Sbjct: 102 SAKANLQQMQANLRKAQEDLAYQHANFNRYKTLYNKGLVSANDFETAQLSY--QTASQSV 159

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
           SSV + +      ++    N
Sbjct: 160 SSVRQQVNAAQEEVKRAQTN 179


>gi|226313506|ref|YP_002773400.1| hypothetical protein BBR47_39190 [Brevibacillus brevis NBRC 100599]
 gi|226096454|dbj|BAH44896.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 505

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 54/402 (13%), Positives = 138/402 (34%), Gaps = 42/402 (10%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             ++ +++S+G +  +    E+K   +G +++  V+ G  + +G  L T +  +    I 
Sbjct: 51  GEVKKTINSAGTVEAKA-REEVKPELNGKVQRVLVKEGQSVKKGDVLFTIDSSDAQLEIQ 109

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYD------VLEKAFESREEQL---------LDFL 142
             ++ I   +  +   K   D +    +       +E+  + R E +         L  +
Sbjct: 110 KLELEILKAKKELSEIKQKKDKITATKEGKVIEVSVEEGQDVRPETVVAKLANTDYLKII 169

Query: 143 GKYHSTCSKVFNYGISS---------VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           G++ S  S+ FN G                +  ++ R+         + N   L++   +
Sbjct: 170 GQFTSYESERFNVGTKVKVFIPTSMYFVDGVVTEVDRIGEKVEGAGGIHNVEVLVKKPGA 229

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
            +  D   ++   +K  +  +  NQ+E  +      L     +   +    +++      
Sbjct: 230 IYVGDKGEVQFTDDKGLLYVSR-NQKEFQLPDEMEILAGTYGKIGKVNVKKDDVIKVGQQ 288

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
            F   ++    +L + +      +  +   ++   +  + +PI+G I             
Sbjct: 289 LFKMDMEASGMELMEKELALKGSLLNMEQKKREIAKNQVTAPISGVITKLGV-KEGE--A 345

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
                  I+  +   Y  A V    I  +K G    V    +     + FK  + +    
Sbjct: 346 PGSEPAAIIMDTTSVYFMAAVGELDIPAIKIGQNVDVYVYAFG---TEPFKGKVVE---- 398

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + ++      +  + V +++ D A      E ++G   +   
Sbjct: 399 LPKEGKKEDKEVRFAVKVELLDKA------EFKHGMTGDNDI 434


>gi|222111488|ref|YP_002553752.1| RND family efflux transporter MFP subunit [Acidovorax ebreus TPSY]
 gi|221730932|gb|ACM33752.1| efflux transporter, RND family, MFP subunit [Acidovorax ebreus
           TPSY]
          Length = 466

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 45/151 (29%), Gaps = 14/151 (9%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTY 329
           +  D  + L   E    + +I SPI G ++       +  A   Q   L+ +        
Sbjct: 205 SVQDARAALATDETNVTKASIRSPIDGVVLSRAVEPGNAVAASLQAVTLLTLAEDLTKLR 264

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   V    +  V+ G  AT     Y   R       +                     V
Sbjct: 265 LEVNVDEADVGSVRPGQKATFTVSAYPSRRYPARTTRVAFGSTKTDN------------V 312

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +  IT L   + ++ LR G  A    T+   
Sbjct: 313 VTYITYLEVDNGDLSLRPGMTAAATITSTER 343



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 77/209 (36%), Gaps = 15/209 (7%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I ++V+++G +    +V  I S  SG +++  V+   Q+ +G  L+  +  +    + 
Sbjct: 80  GQITLTVAANGTLQPTRSV-NIGSELSGTVRRVLVDVNDQVKKGQVLVELDTTKLDSQV- 137

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                   LR       +       +  + E        + +  L       +   + G 
Sbjct: 138 --------LRSRASVASAQARLAQAQATMQEARASLSRLEEVARLSGGKVPSAAELDTGR 189

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFEKNAVS---- 212
           ++  R+   +     S+   R  L  +++++ +A + S    + + + +   NAV+    
Sbjct: 190 AAYERAQADEAAARASVQDARAALATDETNVTKASIRSPIDGVVLSRAVEPGNAVAASLQ 249

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNML 241
              L      + K  LE+  +  +  ++ 
Sbjct: 250 AVTLLTLAEDLTKLRLEVNVDEADVGSVR 278


>gi|168698828|ref|ZP_02731105.1| secretion protein HlyD family protein [Gemmata obscuriglobus UQM
           2246]
          Length = 450

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/403 (11%), Positives = 118/403 (29%), Gaps = 44/403 (10%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----R 107
              +V  +     G + +  V++ +++  G  L+  +       +++K+ ++       R
Sbjct: 35  VNGHVTFVAPRVPGQVLRVLVDDNARVKAGDVLVELDPEPYQVQVNIKQAALAAAEADKR 94

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS----SVYRS 163
                 +  L  L ++   L+ A E  + Q+     +  +  SK      +    + ++ 
Sbjct: 95  ATESEVRGQLAQLRSQRWKLQTAIEQVDNQIALLNARVAALRSKDATLARAKSDLARFKE 154

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT---MMKNLFEKNAVSQNDLNQQE 220
              +    + +Y   ++    +       +    ++     +  L          L    
Sbjct: 155 TLARGAESKQVYDAAVEAVGVAEAQVKQATQEVYEVRVGLGLPPLPPNGGA----LTDVP 210

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---------------- 264
             + ++   +R+ + +  ++   +     ++       ++E                   
Sbjct: 211 AGLNQTFSTVRQAVADMTHIAAQVGLPLSKSEATPTQVIEEFRARDAKGDVDRIFAALVP 270

Query: 265 ---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               ++Q +         L   E  R    +L+ I G +         N  Q  Q LM  
Sbjct: 271 EAPAVKQAEAKVLQARRDLDQAELNRRYCRVLAEIDGVVTRRNVN-PGNNVQAGQQLMA- 328

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--KKFKAIIEKIDPIISQQDN 379
           V      +I A     Q+  ++ G    V    Y   R    +           ++    
Sbjct: 329 VRSLTEIWIDANFKETQLAELRIGQRVEVFADAYGSRRVFRGRVTGFTYGTGSTLALLPA 388

Query: 380 NLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAE--VLFT 416
              T  + +V+    +++    +      L  G      V   
Sbjct: 389 QNATGNFVKVVQRLPVRVELEDYDPEGDTLYAGLSVTPHVYVK 431


>gi|166711729|ref|ZP_02242936.1| transport protein [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 400

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 91/322 (28%), Gaps = 28/322 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L+         +     K  V +       + LL    + +    +     I++    + 
Sbjct: 77  LQADSVAVAPRVSGYVTKVLVSDNQIVEAGQPLLQIDDRTYQATLQQAEAAIAARQADIV 136

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                + +     L    + +   A L   Q ++     L    A +       +  + +
Sbjct: 137 AATANVSAQESALLQARTQVTAAAASLRFAQAEVKRFAPLAASGADTHEHQESLQHDLAR 196

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  +      + K     I                     LEQ Q       +       
Sbjct: 197 ARAQYDAAQAQAKAGESQIQAS---------------RAQLEQAQAGVKQATADADQARV 241

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             E   + S I G +  +++     +       M IVP   L  + A     Q+  ++ G
Sbjct: 242 AVEDTRLTSRIHGRV-GDKTVQVGQFLGAGTRTMTIVPQQSLYLV-ANFKETQVGLMRPG 299

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLA 397
             A +     + ++       +E + P    Q         T  + +V+    ++I  LA
Sbjct: 300 QPAEIEVDALSGVK---LHGKVESLSPGTGSQFALLPPENATGNFTKVVQRVPVRIRVLA 356

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             +    L  G   EV    ++
Sbjct: 357 GDEARKVLVPGMSVEVTVDTRS 378



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 61/217 (28%), Gaps = 6/217 (2%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE- 113
           + V +    SG + K  V +   +  G PLL  +D      +   + +I   +  I    
Sbjct: 80  DSVAVAPRVSGYVTKVLVSDNQIVEAGQPLLQIDDRTYQATLQQAEAAIAARQADIVAAT 139

Query: 114 ----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                     L  +  V   A   R  Q         +      +    S+   L     
Sbjct: 140 ANVSAQESALLQARTQVTAAAASLRFAQAEVKRFAPLAASGADTHEHQESLQHDLARARA 199

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +  +        E++    RA L   Q  +       ++  V+  D  +    ++    +
Sbjct: 200 QYDAAQAQAKAGESQIQASRAQLEQAQAGVKQATADADQARVAVED-TRLTSRIHGRVGD 258

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
               + +          +  + +L      KE    L
Sbjct: 259 KTVQVGQFLGAGTRTMTIVPQQSLYLVANFKETQVGL 295


>gi|116251097|ref|YP_766935.1| HlyD family efflux pump protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255745|emb|CAK06826.1| putative HlyD family efflux pump protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 420

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 87/268 (32%), Gaps = 19/268 (7%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L      +++      +++ + SL ++++   +  +   +  F+          +  
Sbjct: 140 QAALSQAKADVKAAEAAITNIDAQISLQQSVIEQAKATVDASQASFDFAVSDAARSARLI 199

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                +     +    +      + E    A +   N +  +  + EQ         +  
Sbjct: 200 TNGAGTQSRAEQTQSARDQAAAAV-ERDRAALVTAQNKVPVLQTEREQTVAQRDRAAAAA 258

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              E       I++ + GT+   +S     Y      LM +VP   +  + A     Q+ 
Sbjct: 259 QQAELNLSYTDIVAAVDGTV-GARSIRVGQYVTSGTQLMAVVPLHAVYVV-ANFKETQLT 316

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VI 390
           ++  G +  ++   + DI     K  ++ + P    +      +  T  + +      V 
Sbjct: 317 YISPGQSVEIKIDSFPDI---SIKGHVDSVSPASGLEFSLLPPDNATGNFTKIVQRIPVK 373

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAK 418
           + I D A S     LR+G   E     K
Sbjct: 374 IVIDDEALSG---LLRSGMSVEPEIDTK 398



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/240 (10%), Positives = 69/240 (28%), Gaps = 9/240 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK   V +   +  G  L   +D +    +   K  +K     I    + +    +  
Sbjct: 112 GYIKAVLVNDNDAVKAGQVLARIDDRDFQAALSQAKADVKAAEAAITNIDAQISLQQSVI 171

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  +   ++ +      +     +   + N   +              +  + R      
Sbjct: 172 EQAKATVDASQASFDFAVSDAARSARLITNGAGTQSRAEQTQSARDQAAAAVERDRAALV 231

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           ++  +  +   +++ T+ +      A  Q +LN            +   +  +   +   
Sbjct: 232 TAQNKVPVLQTEREQTVAQRDRAAAAAQQAELN---LSYTDIVAAVDGTVGARSIRVGQY 288

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL------SPIAG 298
                +       +   +  + ++ Q T+      + I   +    +I       SP +G
Sbjct: 289 VTSGTQLMAVVPLHAVYVVANFKETQLTYISPGQSVEIKIDSFPDISIKGHVDSVSPASG 348


>gi|330975075|gb|EGH75141.1| secretion protein HlyD [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 385

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/388 (11%), Positives = 112/388 (28%), Gaps = 87/388 (22%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PIE + ++      +     I    SG + +  V++   +  G  L+  +D        
Sbjct: 64  SPIESTENAQ----VKGQTTLIGPQLSGYVYEVPVQDFQFVKAGDLLVRLDD-------R 112

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + +  +      +  +K++L     +    E     R+ +L + + +   + +       
Sbjct: 113 IYRQRLDQAMAQLAVQKASLANNLQQRRSAEATIGQRQAELQNSIAQSRKSAA------- 165

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                                                   DL   + L    +VS+++L 
Sbjct: 166 ----------------------------------------DLRRNQALVTDGSVSKSEL- 184

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                V ++          +   +  I              L+ +  +    + + A+  
Sbjct: 185 ----DVTRAADAQANAAVAEARAVLQIA----------REDLQTVIVNRGSLEASVANAQ 230

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + + +     +   I++P  G +          Y      LM +VP  +     A +   
Sbjct: 231 AAIELARIDLDNTRIVAPRDGQLGQIGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKET 287

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKI 393
           Q+ +V+ G   +            +    ++++ P    +      +  T  + ++  +I
Sbjct: 288 QMANVRLGQPVSFTVDALDGH---EMHGHVQRLSPAAGSEFSLLPADNATGNFVKISQRI 344

Query: 394 TDLAFSDNNIE----LRNGFPAEVLFTA 417
                 D +      LR G    V    
Sbjct: 345 PVRIVVDADQPMLEHLRPGMSVVVSIDT 372


>gi|262384234|ref|ZP_06077369.1| efflux transporter [Bacteroides sp. 2_1_33B]
 gi|262293937|gb|EEY81870.1| efflux transporter [Bacteroides sp. 2_1_33B]
          Length = 416

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 106/354 (29%), Gaps = 91/354 (25%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---------NEDNVV-- 57
            K++ P     +  + ++G I     +  L ++    S G +           +  V   
Sbjct: 12  QKKHIPYVAGGVLFVILLGWIIFGDHASTLKVDARGISIGNVTREQFNDFFRMDGQVQPI 71

Query: 58  -EIK--SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             ++      GI+++  VE G+Q+ +G  ++   +                         
Sbjct: 72  TVVQLSPEEGGIVQEKVVEEGAQVKKGDIIVRLSNSNLD--------------------- 110

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
             L  LN + ++ EK    R  Q+     K  +   K+             M + R R  
Sbjct: 111 --LQILNAEAELAEKQNFLRNTQVTMEQDKLTNQMEKL----------QYDMDMNRARRS 158

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
           +  +                        + L+++N +++ D  +      K   EL    
Sbjct: 159 FNQQ------------------------EQLYKENLIAKEDYLK-----AKEDFELASQK 189

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           H        I E   + ++     + E+   L   ++       +       +E   + S
Sbjct: 190 HAL------ITERLRQDSISRMIQMDEMEASLANMRKNILLIRER-------KENLNVRS 236

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
            I G  +              Q + +I   S    I A +    I  VK G +A
Sbjct: 237 QIDGE-LGLLDVVLGQSINPGQKIGQINDLSD-YKIEAMIDEHYIDRVKPGLSA 288


>gi|218532358|ref|YP_002423174.1| secretion protein HlyD [Methylobacterium chloromethanicum CM4]
 gi|218524661|gb|ACK85246.1| secretion protein HlyD family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 401

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/365 (11%), Positives = 102/365 (27%), Gaps = 85/365 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V NG  + +G  +   +D +    +      +      I             
Sbjct: 100 SGYLAAVPVVNGQAVKRGDVIARLDDGDYRLALKAAADKLATQESTIAR----------- 148

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              + +  E+ + Q+L    +  +  +     G +   R+  M+                
Sbjct: 149 ---VGRQAEAAQAQVLQSAAQIDAAKADAVRAG-ADYARATGMQAD-------------- 190

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                                      V+++ L+Q +    ++   ++           +
Sbjct: 191 --------------------------FVAKSRLDQAKADRDRTEAAVKSAEAALVAARAN 224

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +  L  +                 + +   A+  +      +  +   I +P  G +V N
Sbjct: 225 VEVLKAQTR---------------EAENLAAELRTAADRARRDLDFAVIRAPFDG-VVGN 268

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++  +  Y      +  +VP  +   + A     Q+  V+ G    +    Y D      
Sbjct: 269 KAVEAGAYVSPGSRIAALVPL-QSVRVDANFKETQLARVRPGQEVHIHVDAYPDR---DI 324

Query: 364 KAIIEKIDPII----SQQDNNLQTQEYYEVILKIT-----DLAFSDNNIELRNGFPAEVL 414
              +E + P      S    +  T  + +++ ++          +   + LR G    V 
Sbjct: 325 VGTVESLSPASGSVFSLLPPDNATGNFTKIVQRLPVRVHVPEEVAREGL-LRPGLSVVVK 383

Query: 415 FTAKN 419
              + 
Sbjct: 384 VDTRE 388


>gi|150016680|ref|YP_001308934.1| secretion protein HlyD family protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903145|gb|ABR33978.1| secretion protein HlyD family protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 491

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 64/310 (20%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V  G  + +G  L T +     + +   + ++     +    + +L     KYD 
Sbjct: 99  VASINVSVGDVVKKGDVLATIDTSTLQEQLAEAEQTLN---ANEQKNQLSLTSAKQKYDN 155

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L+   ++  +                               +   +S+   +LD+E+KS 
Sbjct: 156 LQYLHDNNLQ----------------------------TDIINAEKSVDSAKLDMEDKS- 186

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                     K     K +F+   +SQ DLN  +     S     ++    +    + ++
Sbjct: 187 ----------KVYEYDKVMFQNGEISQQDLNTAKTNYENSKGVYDKSTVALEAAKVNSDQ 236

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE--KTREQKTILSPIAGTIVYNQ 304
              EA   + +            Q    D+ S+L   +  K  +   +++ + GT+    
Sbjct: 237 ALSEAKTAYES-----------AQAAANDKSSRLAYEDKKKKLQDAQVVATVDGTVTNVN 285

Query: 305 SFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +       Q S  L  I         + A V    +  VK G  A +             
Sbjct: 286 AV-VG--IQASGALFVI--QDLGNLIVNASVDETDVAKVKVGQKAQITTDASGSDI---I 337

Query: 364 KAIIEKIDPI 373
            A +  ++P+
Sbjct: 338 DAQVVSVEPV 347


>gi|327190984|gb|EGE58038.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CNPAF512]
          Length = 406

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 99/313 (31%), Gaps = 28/313 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +      +       E + +          +  F   +      L ++  ++ +
Sbjct: 92  QADMVGVTTDVSGIVDQINVHENEAVKAGQVLFGLRADSFKIALDGAKAQLGVQRNQIMN 151

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +  +      + +  +A L  +Q      ++L    + +Q+  ++ +  +  +  ++   
Sbjct: 152 LKASYQQSLAEITQAQADLPYYQDQFDRQQSLVNNGSATQSAYDEAKHNLEAARQKVTVA 211

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             E    L  +    D+   E   YL+                 S +   ++  +   + 
Sbjct: 212 KAEAATTLAQLGGSADQPIEENPLYLQ---------------AKSNVDNAQRELDHSVVK 256

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +    +    +Y Q SQ    +V  +   +I A     ++ +VK G  A +   
Sbjct: 257 APFDGIVTNVNALQVGSYLQASQQAFSLV-ATDHLWIAASPKETELTYVKSGQMAEIYVD 315

Query: 354 HYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            Y  +    +K  +E I P          +Q       +    + ++++          L
Sbjct: 316 TYPGVT---WKGKVESISPASGSSFALLPAQNTTGNWVKVVQRIPMRVSIEDVQGKP-PL 371

Query: 406 RNGFPAEVLFTAK 418
           R G    V     
Sbjct: 372 RVGMSTVVDVDTG 384


>gi|257483784|ref|ZP_05637825.1| HlyD family secretion protein [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289627530|ref|ZP_06460484.1| HlyD family secretion protein [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289649918|ref|ZP_06481261.1| HlyD family secretion protein [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330868349|gb|EGH03058.1| HlyD family secretion protein [Pseudomonas syringae pv. aesculi
           str. 0893_23]
 gi|331012704|gb|EGH92760.1| HlyD family secretion protein [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 385

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 47/388 (12%), Positives = 112/388 (28%), Gaps = 87/388 (22%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PIE + ++      +     I    SG + +  V++   +  G  L+  +D        
Sbjct: 64  SPIESTENAQ----VKGQTTLIGPQLSGYVYEVPVQDFQFVKAGDLLVRLDD-------R 112

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + +  +      +  +K++L     +    E     R+ +L + + +   + +       
Sbjct: 113 IYRQRLDQAIAQLAVQKASLANNLQQRRSAEATIGQRQAELQNSIAQSRKSAA------- 165

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                                                   DL   + L    +VS+++L 
Sbjct: 166 ----------------------------------------DLRRNQALVTDGSVSKSEL- 184

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                V ++          +   +  I              L+ +  +    + + A+  
Sbjct: 185 ----DVTRAADAQANAAVAEARAVLQIA----------REDLQTVIVNRGSLEASVANAQ 230

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + + +     +   I++P  G +          Y      LM +VP  +     A +   
Sbjct: 231 AAIELARIDLDNTRIVAPRDGQLGQIGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKET 287

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKI 393
           Q+ HV+ G   +            +    +++I P    +      +  T  + ++  +I
Sbjct: 288 QMAHVRLGQPVSFTVDALDGH---EMHGHVQRISPAAGSEFSLLPADNATGNFVKISQRI 344

Query: 394 TDLAFSDNNIE----LRNGFPAEVLFTA 417
                 D +      LR G    V    
Sbjct: 345 PVRIVVDADQPMLEHLRPGMSVVVSIDT 372


>gi|89901954|ref|YP_524425.1| secretion protein HlyD [Rhodoferax ferrireducens T118]
 gi|89346691|gb|ABD70894.1| secretion protein HlyD [Rhodoferax ferrireducens T118]
          Length = 446

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 53/191 (27%), Gaps = 15/191 (7%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             + E   +         E +   A   +  + +L   +       + ++  E    + +
Sbjct: 166 GRLEEVARLSGGKVPSKAELDSGRATLERAQAEELS-ARANVVQAQATVSTDETNLSKAS 224

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           I SP  G ++       +  A   Q   L  +        ++  V    +  VK G  A 
Sbjct: 225 IRSPTDGVVLTRTVDPGNAVAASLQAVTLFTVAEDLSKLRLQVNVDEADVGSVKVGQKAR 284

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                Y           +     I               V+  IT +   + ++ LR G 
Sbjct: 285 FTVSAYPARNYPATITRVAFGSTITEN------------VVTYITYMEVDNKDLSLRPGM 332

Query: 410 PAEVLFTAKNT 420
            A    T+   
Sbjct: 333 TASATITSTER 343



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 81/219 (36%), Gaps = 30/219 (13%)

Query: 17  LKRMTLLSIIGI-----IGLITWSILL----------------PIEISVSSSGEILNEDN 55
            +R TL  I+G+     +G   W                     + ++V+++G I    +
Sbjct: 38  WRRTTLWIIVGLLVLSGVGYYFWQASATRNATPVFVTEPANKGNLTLTVAANGTIQPTRS 97

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
           V  I S  SG + +  V+   Q+ +G  L+  +  + +D +   + ++   R  +    +
Sbjct: 98  V-SIGSELSGTVLRVLVDVNDQVKKGQVLVELDTAKLSDQVARSRAALSAARAQVAQAVA 156

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            +           +    R E++    G    + +++ +   +      +    R   + 
Sbjct: 157 TVSE--------AQGNLGRLEEVARLSGGKVPSKAELDSGRATLERAQAEELSARANVVQ 208

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                  ++++L +A + S    + + + +   NAV+ +
Sbjct: 209 AQATVSTDETNLSKASIRSPTDGVVLTRTVDPGNAVAAS 247


>gi|114328190|ref|YP_745347.1| type I secretion adaptor protein [Granulibacter bethesdensis
           CGDNIH1]
 gi|114316364|gb|ABI62424.1| type I secretion adaptor protein (HlyD family) [Granulibacter
           bethesdensis CGDNIH1]
          Length = 442

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 105/356 (29%), Gaps = 59/356 (16%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGS 76
             + LL +   I +I WS +     +V   G ++  D +   I +P +G I +  V  G 
Sbjct: 45  WLVGLLCLAFCISIILWSCISRYRETVQGRGILVRTDGMFIGINAPKAGWIDEV-VAQGR 103

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++     + +    E    I   +  I                                 
Sbjct: 104 KVKAHDLVASLATPEEDARIQDMQSRI--------------------------------- 130

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                        +++     S   R ++      R+    R +L+  + L    ++   
Sbjct: 131 -------------AQIETQQASISKRYIQRIAVETRAQQRRRDELQESAGLTERRIAEAA 177

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             L+  + LF   A + + +++    ++ S    RE +   +  L  ++ +      +  
Sbjct: 178 VTLSNREYLFNNGAGTIDRVHEARERLFAS----REALSHTRADLASLDSVLLSLEGQRD 233

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             L+ I R L + Q           + +       I +P AG +      + +      Q
Sbjct: 234 LELESIHRQLLELQGQLEQAKLARKLAD------EIRAPQAGLV-ALVPVTKNALVAAGQ 286

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            ++ +        +   V     + ++ G    +                +  I P
Sbjct: 287 RIITLETGESKLEVLFFVPGDLGKRIEPGMQVRISPTTAPREEYGMLIGKVVSISP 342


>gi|83716645|ref|YP_439487.1| HlyD family secretion protein [Burkholderia thailandensis E264]
 gi|83650470|gb|ABC34534.1| HlyD family secretion protein [Burkholderia thailandensis E264]
          Length = 477

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 96/311 (30%), Gaps = 39/311 (12%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           I+  +S L F   +  ++   F+  E   +           +V+         ++ ++  
Sbjct: 194 IEAHESVLSFTQVQAPIVYLPFD--EGARVTRGTVLARVDDRVYRRQTDIDRANVDVQTA 251

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++ +   N   LE+     R  L   + D      L  ++AVSQ                
Sbjct: 252 QVEANRSNVAALEHGVLSDRFDLDEKRLDFVRADTLARQSAVSQQ--------------- 296

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +            DEA L  A        D+       A   +K  + E T   
Sbjct: 297 -SRDLAQTAARQSAAALARDEALLAAA------RNDVALAVAGVAAAQAKRKLDEATLSY 349

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P  G I   +       A     +  I       ++RA V    +  ++ G  A 
Sbjct: 350 TELAAPFDGVI-AVRHAELGQLAGPGVAIFTIAELDH-VWLRAYVNEPDVGRIRLGEPAD 407

Query: 350 VRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           VR   Y     +     I  + P       + + +  +  + Y V + I +        E
Sbjct: 408 VRTDAYPSAVYR---GRISFVSPQAEFTPKTVETHEERVTQVYRVRIDIDNPT-----HE 459

Query: 405 LRNGFPAEVLF 415
           L  G PA+   
Sbjct: 460 LLPGMPADATI 470


>gi|300024423|ref|YP_003757034.1| secretion protein HlyD [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526244|gb|ADJ24713.1| secretion protein HlyD family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 368

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 83/247 (33%), Gaps = 19/247 (7%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           ++   A +   ++    +  L +    +++DL++ +R V+ +           K      
Sbjct: 109 AAASEAGVRERERSEEQVSGLAQDRRNAEDDLSKAQRAVFAAHEAFDAAYRSAKADKGTD 168

Query: 245 NE---------LYDEANLEFANYLKEISRDL-----EQNQRTFADEMSKLTILEKTREQK 290
           +             EA  +  N L E+         ++ + + A   S LT  E   E+ 
Sbjct: 169 DAVETARKDLVSKKEALADAKNKLSEVEAKSGMPLPQRLESSLALARSDLTSAELALERT 228

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTAT 349
            I +P  GT++   +      A  S     +V        +RA+V  +    V+ G    
Sbjct: 229 RIRAPADGTVLNMLA-KVGETAVPSPDSALVVFGDMSSLRLRAEVEERDAAKVRVGQRVV 287

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           V+   + D   K F+  +  I   ++      +       +  +  +   D +  L  G 
Sbjct: 288 VKADAFPD---KTFEGTVTSISQSLAAPRIATRGPRRPNDVEVVEVMVDLDGHPPLFTGM 344

Query: 410 PAEVLFT 416
             +  F 
Sbjct: 345 RVDTFFK 351


>gi|150389324|ref|YP_001319373.1| RND family efflux transporter MFP subunit [Alkaliphilus
           metalliredigens QYMF]
 gi|149949186|gb|ABR47714.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
           metalliredigens QYMF]
          Length = 406

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 77/274 (28%), Gaps = 46/274 (16%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            K     I     S+ +    +          +      +  L      L   K L+E  
Sbjct: 99  EKDIQNAIEQAENSIDLAKRSVEQAESGIKSAKINYEATKESLEDALATLERTKTLYEAG 158

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           AV +  L Q E       LE    I E K +   I+                     +Q 
Sbjct: 159 AVPKTQLEQAEMAASSRPLE----IAEAKVLQAEIS--------------------YQQA 194

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSK 326
               +         +   +   + +PI G +           A  +Q    +  I     
Sbjct: 195 LNQLSQAQISYEQAKGNLDNTLVKAPIRGVVSSLSVV-EGQLASNAQGAATIADI----D 249

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
             Y++  VT   +  + +G   +V+          K K  I+ I P    +         
Sbjct: 250 SVYLKVDVTENMVNRLHQGQEVSVKVEA---ALNGKIKGRIDYISPTTDAKTQL------ 300

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           Y V + I      +   ++R+G    +   A++ 
Sbjct: 301 YTVKVYI-----HNKEGKIRSGMSGSIELDAESR 329



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 61/182 (33%), Gaps = 4/182 (2%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           V +     G + K  ++ G  + +   L   ++ +  + I+  + SI   +  ++  +S 
Sbjct: 67  VTVMPQTPGTVAKVNIKLGDDVAKDQVLFVMDEKDIQNAIEQAENSIDLAKRSVEQAESG 126

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHS-TCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           +      Y+  +++ E     L      Y +    K           S  +++   + + 
Sbjct: 127 IKSAKINYEATKESLEDALATLERTKTLYEAGAVPKTQLEQAEMAASSRPLEIAEAKVLQ 186

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQERIVYKSTLELRE 232
                 +  + L +A +S  Q    +   L +   +  VS   + + +            
Sbjct: 187 AEISYQQALNQLSQAQISYEQAKGNLDNTLVKAPIRGVVSSLSVVEGQLASNAQGAATIA 246

Query: 233 NI 234
           +I
Sbjct: 247 DI 248


>gi|260462960|ref|ZP_05811164.1| polysaccharide export protein [Mesorhizobium opportunistum WSM2075]
 gi|259031354|gb|EEW32626.1| polysaccharide export protein [Mesorhizobium opportunistum WSM2075]
          Length = 475

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 64/201 (31%), Gaps = 7/201 (3%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           LI L +V++   +  ++ E S  D +    +V     +S    ++            VF 
Sbjct: 198 LIRLNEVNLLVRKARLEAELSHADEIALPPEVTAHIQDSAIAMIV-------KQERLVFQ 250

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +   +K        +      LE +   L   + S QK+L  +  L +K      
Sbjct: 251 ARSEGLDTQIKALQNLREFLEKELTSLEEQLVFLDTQIKSIQKELKSVSALVDKGLAVAP 310

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                ER + ++  E            + I++              E++ DL Q Q    
Sbjct: 311 REFSLERTLAQAQSERLAAETSLLRGRQEISKTDISILELQDGRRNEVTVDLRQTQAELD 370

Query: 275 DEMSKLTILEKTREQKTILSP 295
              SK    ++      + +P
Sbjct: 371 ALASKTETTQQLLYDSEVSAP 391


>gi|148242002|ref|YP_001227159.1| HlyD family secretion protein [Synechococcus sp. RCC307]
 gi|147850312|emb|CAK27806.1| HlyD family secretion protein [Synechococcus sp. RCC307]
          Length = 332

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 94/250 (37%), Gaps = 27/250 (10%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL-NQQERIVYKSTLELRENIHEQKNM 240
            N+    +A L+S +++L+  ++  + N  ++  +   Q+R  Y  + ++     EQ   
Sbjct: 95  RNQLDASQARLASMEQELSKARDELKNNEAARWIVSLNQKRYAYLLSKQVVALEKEQ--- 151

Query: 241 LRHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              +     EA+ + A    EI+R    +E+ Q       S+L             +P+ 
Sbjct: 152 --ELQASTLEADAQVARAQAEITRLEKRIEEQQARIKAHRSELGSATTDLNYTRYYAPMD 209

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
             I  + S     Y +  Q L ++V  +   ++ A    +QI+ ++ G  A ++   Y  
Sbjct: 210 SYISNSFSIRVGQYVKPGQALFQLV-DNGQWWVDANFKEEQIRRIRPGMNAGIKLDMYPG 268

Query: 358 IREKKFKAIIEKIDP-------IISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRN 407
            R   F   +  I         ++  Q+      +  + + V +++      ++   LR 
Sbjct: 269 HR---FTGKVINISAGSGAYYSLLPPQNATGNWVKVPQRFPVRIQLEQ----NDKRPLRA 321

Query: 408 GFPAEVLFTA 417
           G  A      
Sbjct: 322 GATAYATVNT 331



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 2/143 (1%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           V +    +G IK   V+    + +G  +   E      ++D K+  +   +  + + +  
Sbjct: 52  VTVAPYVAGYIKTIHVQPNEYVKEGQLIYEIEPRPLQLIVDTKRNQLDASQARLASMEQE 111

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           L    ++    E A       L      Y  +   V       +  S      ++     
Sbjct: 112 LSKARDELKNNEAA--RWIVSLNQKRYAYLLSKQVVALEKEQELQASTLEADAQVARAQA 169

Query: 177 NRLDLENKSSLLRALLSSHQKDL 199
               LE +    +A + +H+ +L
Sbjct: 170 EITRLEKRIEEQQARIKAHRSEL 192


>gi|21243208|ref|NP_642790.1| transport protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108735|gb|AAM37326.1| transport protein [Xanthomonas axonopodis pv. citri str. 306]
          Length = 400

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 91/322 (28%), Gaps = 28/322 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L+         +     K  V +       + LL    + +    +     I++    + 
Sbjct: 77  LQADSVAVAPRVSGYVTKVLVSDNQIVEAGQPLLQIDDRTYQATLQQAEAAIAARQADIV 136

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                + +     L    + +   A L   Q ++     L    A +       +  + +
Sbjct: 137 AATANVSAQESALLQARTQVTAAAASLKFAQAEVKRFAPLAASGADTHEHQESLQHDLAR 196

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  +      + K     I                     LEQ Q       +       
Sbjct: 197 ARAQYDAAQAQAKAGESQIQAS---------------RAQLEQAQAGVKQATADADQARV 241

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             E   + S I G +  +++     +       M IVP   L  + A     Q+  ++ G
Sbjct: 242 AVEDTRLTSRIHGRV-GDKTVQVGQFLGAGTRTMTIVPQESLYLV-ANFKETQVGLMRPG 299

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLA 397
             A +     + ++       +E + P    Q         T  + +V+    ++I  LA
Sbjct: 300 QPAEIEVDALSGVK---LHGKVESLSPGTGSQFALLPPENATGNFTKVVQRVPVRIRVLA 356

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             +    L  G   EV    ++
Sbjct: 357 GDEARKVLVPGMSVEVTVDTRS 378


>gi|171317096|ref|ZP_02906299.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MEX-5]
 gi|171097730|gb|EDT42557.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MEX-5]
          Length = 405

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 87/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRQSDLSKAQDDLRRRVAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ +R      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVRAAQASVDAAQQQLASNRALTANTTIASHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        +  + +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 MAAAAKVRDAYLANARNVLPAPVTGYVAK-RSVQVGQRVSPGNPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSAVYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V ++I       + + +      +V   
Sbjct: 317 RLPVRIEIDPKELEKHPLRIGLSMQVDVNIK 347



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/134 (10%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQITGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L     + +  +   +  ++   +V  +      
Sbjct: 116 GLFVNDDQYRAQVALRQSDLSKAQDDLRRRVAVAQTGAVSQEEISHARDAVRAAQASVDA 175

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 176 AQQQLASNRALTAN 189


>gi|154497701|ref|ZP_02036079.1| hypothetical protein BACCAP_01677 [Bacteroides capillosus ATCC
           29799]
 gi|150273199|gb|EDN00344.1| hypothetical protein BACCAP_01677 [Bacteroides capillosus ATCC
           29799]
          Length = 564

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 48/416 (11%), Positives = 119/416 (28%), Gaps = 62/416 (14%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + +SVS +G +   D+   + +   G I     E G Q+ +G  L   +  +  + I+  
Sbjct: 77  LTVSVSGTGTVEPADSYQ-VTALVKGEILDAPFEEGDQVEKGDVLYQIDASDVQNSIERA 135

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++S++  R        + +      DV        ++   +      +           +
Sbjct: 136 EISVEQARLAYQNALDSKEDAAENTDVKASDTGVIQKLYYETGDNVAAGTPVADIIDRDT 195

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA--------- 210
           +  ++        S Y+     E+ +  +     + Q  +  +  + +            
Sbjct: 196 MKLTIPFHSADAASFYVG----ESATVYVDGTAETLQGTVDAISPVDQAGTGGTLVREIT 251

Query: 211 --VSQNDLNQQERIVYKSTL------------ELRENIHEQKNMLRHI-----NELYDEA 251
             VS       +     S                +  +  + +           +   + 
Sbjct: 252 ITVSNPGALSDQNTGTASVGGADCAGTGTFAYAAQSTVTARTSGKLETLTVSEGDRVTKD 311

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +  A    ++   ++  + +       L   +   E  TI SPI+GT++          
Sbjct: 312 QIIGAFEATDMESQIKNAELSLRSAELSLQSTKDQLENYTITSPISGTVIEKNY------ 365

Query: 312 AQQSQPL---------MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +    L         + ++           +    I  ++ G    VR      +  ++
Sbjct: 366 -KAGDNLDTSAAAAGYLAVIYDMSSLSFTMNIDELYIGQIEVGQ--EVRITA-DALEGQE 421

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           F   + KI+         +     Y V ++I +        EL  G         +
Sbjct: 422 FTGHVSKINI----NGTTMNGVTTYPVTVEIDNPG------ELLPGMNVSAEILVE 467


>gi|139436895|ref|ZP_01771055.1| Hypothetical protein COLAER_00026 [Collinsella aerofaciens ATCC
           25986]
 gi|133776542|gb|EBA40362.1| Hypothetical protein COLAER_00026 [Collinsella aerofaciens ATCC
           25986]
          Length = 477

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 19/164 (11%)

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS----FSSSNYA------QQS 315
           +   QR+ A   + L         +T+ +P +G+IV   +      +             
Sbjct: 217 VSAAQRSLASAQANLDQANAKAASRTVTAPSSGSIVELNAKVGATVTGGMIMGESDTSGG 276

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           +  M+I        +  +V  K I  +  G  A V +P + DI     +  +  I  + +
Sbjct: 277 KQCMQIA-DLSKMKVTVQVGEKDIAKIAVGQNANVTYPAFPDIVS---QGTVTAIASVAN 332

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              N   +   + V     D+     +  L+ G  AEV    + 
Sbjct: 333 SDSNYGSSSVTFNV-----DILIEAPDARLKPGMTAEVSVVTEQ 371



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 45/125 (36%), Gaps = 23/125 (18%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSG----------------EI 50
           K  +R     ++R+    ++G I LI  +I+  + I+    G                 +
Sbjct: 58  KRAERRRKKLIRRVIAAGVVGAIALI--AIVATLVINAQPQGASGPVTDMVTEGTFTTTV 115

Query: 51  LNEDNVVEIKSPFS-----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             +  +  I S        G +    V+ G  + +G  L+T ++ E    +   + ++  
Sbjct: 116 EAKGQLKPISSSVVSPSVDGTVDSINVQAGQSVNEGDVLMTIKNDELDRNVAEAQRAVTA 175

Query: 106 LRCHI 110
            +  +
Sbjct: 176 AQEDL 180


>gi|282878452|ref|ZP_06287238.1| efflux transporter, RND family, MFP subunit [Prevotella buccalis
           ATCC 35310]
 gi|281299438|gb|EFA91821.1| efflux transporter, RND family, MFP subunit [Prevotella buccalis
           ATCC 35310]
          Length = 417

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 94/312 (30%), Gaps = 78/312 (25%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
              +  VS  G ++    VV+I     G++ +   E GS + +G  ++   +        
Sbjct: 57  AQFDDYVSVDGNVVPI-QVVQISPEEGGVVMERVAEEGSHVRKGDVIVRLNNSNLD---- 111

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                              L+ LN + ++ EK    R  Q+     + ++          
Sbjct: 112 -------------------LEILNAESELAEKQNMLRNTQITMEQDRLNN---------- 142

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            +    L M +   +  Y ++  L+ +    R      ++D  +        AV +N+L 
Sbjct: 143 QNEAAQLSMDVQAKKRTYNHQTALQQEQLNSREEYLKAKEDYEL--------AVKKNELI 194

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            Q     K   +LR                                  + Q     +   
Sbjct: 195 AQR---LKKDAQLR-------------------------------RAQMNQMNDNLSSMR 220

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
             + ++ + +E   + S I G +               Q +  I   S    + A+V   
Sbjct: 221 RNVELVRQRKEHLNVRSQIDGEVGQLNI-ELGQSISPGQKIGVINDLSD-YKVEAQVDEH 278

Query: 338 QIQHVKKGYTAT 349
            I  V +G TAT
Sbjct: 279 YIDRVHQGLTAT 290


>gi|300690460|ref|YP_003751455.1| multidrug resistance transport transmembrane protein [Ralstonia
           solanacearum PSI07]
 gi|299077520|emb|CBJ50146.1| putative multidrug resistance transport transmembrane protein
           [Ralstonia solanacearum PSI07]
          Length = 388

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/320 (10%), Positives = 86/320 (26%), Gaps = 29/320 (9%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           ++  I T    +     + DV         ++LL    + +      +   + +   S  
Sbjct: 72  IQADIVTVAPKVSGYVERVDVANNQEVRAGQRLLRIDPREYVAQLAQYQAQVEAANASAD 131

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               ++ +        + +                   +L    A +++ L+  +    +
Sbjct: 132 NTRAQLATQKAAIAQAQAQLQSAEHDAQFTAAQTQRYASLVASGAETRDRLSTLQNQAAQ 191

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +                 I                 I   L Q +       ++  + E 
Sbjct: 192 ARANAAAQRAALTKATLEIAA---------------IQAQLRQAEAQAKTARAQAAVAEV 236

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 + +   G +  +Q      +      LM +VP     YI A     Q+  ++ G
Sbjct: 237 NLAATELRASTDGRVGDSQVR-VGQFVSAGTRLMSVVPAH--LYITANFKETQLGRMRIG 293

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAF 398
               +    + D      +  +E + P    Q         T  + +++ ++    ++  
Sbjct: 294 QPVHIHVDAFPDE---AIEGRVESLSPGTGAQFSLLPPQNATGNFIKIVQRVPVRIEIDV 350

Query: 399 SDNNIELR-NGFPAEVLFTA 417
           +D    L   G    V    
Sbjct: 351 TDGLKPLLAAGMSVTVDVDT 370



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 55/168 (32%), Gaps = 2/168 (1%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++V +    SG +++  V N  ++  G  LL  +  E    +   +  ++      D  +
Sbjct: 75  DIVTVAPKVSGYVERVDVANNQEVRAGQRLLRIDPREYVAQLAQYQAQVEAANASADNTR 134

Query: 115 SALDFLNNKYDVLEKAFESRE--EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           + L          +   +S E   Q      + +++           +            
Sbjct: 135 AQLATQKAAIAQAQAQLQSAEHDAQFTAAQTQRYASLVASGAETRDRLSTLQNQAAQARA 194

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +    R  L   +  + A+ +  ++     K    + AV++ +L   E
Sbjct: 195 NAAAQRAALTKATLEIAAIQAQLRQAEAQAKTARAQAAVAEVNLAATE 242


>gi|124026293|ref|YP_001015409.1| membrane fusion protein [Prochlorococcus marinus str. NATL1A]
 gi|123961361|gb|ABM76144.1| possible membrane fusion protein [Prochlorococcus marinus str.
           NATL1A]
          Length = 357

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 108/291 (37%), Gaps = 43/291 (14%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLT 200
           L + +++   +  + I++   SL   +T    +  N+ +++  K   +   +   + D  
Sbjct: 29  LSQDNASNKDITEFTIAAESGSLPGLITASGELKANKSVNVSPKRQGILNEIFVEEGDQ- 87

Query: 201 MMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                 +K   +++ D    E  +     E++ N   QK   +    L++E  +    Y 
Sbjct: 88  -----VKKGDLIAKMDFGDLEFRIE----EIKANYETQKASFKRREMLFNEGAISAEEY- 137

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ----- 314
                  E+ +  F    ++   +E    + +I +P  G I    +     +        
Sbjct: 138 -------EEYKNRFLKSKARFKQIEVEENETSIRAPFRGVITSRYAV-PGAFVTPTTSAS 189

Query: 315 -----SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                      IV  S+   I AKV    I  +K G  A++R   + D   K+FKA++ K
Sbjct: 190 SSREGGATSSSIVKLSQGLEIVAKVPESDIGRIKTGQEASIRVDAFPD---KRFKAVVSK 246

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           I P   + +N       +EV L        +   +LR G  +++ F    T
Sbjct: 247 ISPSAIKNNNVTS----FEVTL-----LLENRPQDLRLGMTSDINFQTGAT 288



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 89/232 (38%), Gaps = 28/232 (12%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIG--------------LITWSILLPIEISVSSSGEIL 51
           WKNLK+     L  ++ LS+ GI                    +    +   +++SGE+ 
Sbjct: 3   WKNLKKKKVIGLIALSALSVGGISFKLSQDNASNKDITEFTIAAESGSLPGLITASGELK 62

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
             +  V +     GI+ +  VE G Q+ +G  +   +           +  I+ ++ + +
Sbjct: 63  -ANKSVNVSPKRQGILNEIFVEEGDQVKKGDLIAKMD-------FGDLEFRIEEIKANYE 114

Query: 112 TEKS---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           T+K+     + L N+  +  + +E  + + L    ++     +     I + +R +    
Sbjct: 115 TQKASFKRREMLFNEGAISAEEYEEYKNRFLKSKARFKQIEVEENETSIRAPFRGVITSR 174

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +   ++      + S    A  SS  K    ++ + +   V ++D+ + +
Sbjct: 175 YAVPGAFVTPTTSASSSREGGATSSSIVKLSQGLEIVAK---VPESDIGRIK 223


>gi|84624278|ref|YP_451650.1| transport protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|188576107|ref|YP_001913036.1| transport protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|84368218|dbj|BAE69376.1| transport protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|116247042|gb|ABJ89968.1| transport protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188520559|gb|ACD58504.1| transport protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 400

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 91/322 (28%), Gaps = 28/322 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L+         +     K  V +       + LL    + +    +     I++    + 
Sbjct: 77  LQADSVAVAPRVSGYVTKVLVSDNQIVEAGQPLLQIDDRTYQATLQQAEAAIAARQADIV 136

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                + +     L    + +   A L   Q ++     L    A +       +  + +
Sbjct: 137 AATANVSAQESALLQARTQVTAATATLRFAQAEVKRFAPLAASGADTHEHQESLQHDLAR 196

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  +      + K     I                     LEQ Q       +       
Sbjct: 197 ARAQYDAAQAQAKAGESQIQAS---------------RAQLEQAQAGVKQATADADQARV 241

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             E   + S I G +  +++     +       M IVP   L  + A     Q+  ++ G
Sbjct: 242 AVEDTRLTSRIHGRV-GDKTVQVGQFLGAGTRTMTIVPQQSLYLV-ANFKETQVGLMRPG 299

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLA 397
             A +     + ++       +E + P    Q         T  + +V+    ++I  LA
Sbjct: 300 QPAEIEVDALSGVK---LHGKVESLSPGTGSQFALLPPENATGNFTKVVQRVPVRIRVLA 356

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             +    L  G   EV    ++
Sbjct: 357 GDEARKVLVPGMSVEVTVDTRS 378


>gi|167631108|ref|YP_001681607.1| secretion protein hlyd, putative [Heliobacterium modesticaldum
           Ice1]
 gi|167593848|gb|ABZ85596.1| secretion protein hlyd, putative [Heliobacterium modesticaldum
           Ice1]
          Length = 631

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 48/341 (14%), Positives = 102/341 (29%), Gaps = 27/341 (7%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                L           ++  ++A++       + E    +   QL D            
Sbjct: 191 AAQAKLSAAQAGPSEATLNAARTAVEAAERLLVIAEDQLNNARIQLNDAYATPGPIGPDG 250

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLR-----------ALLSSHQKDLT 200
                ++V R  +    + +S Y   R++L N    L            A + +  K   
Sbjct: 251 LPTANTAVIRQAESVYHQAQSSYNQSRVNLANAQKQLADLQAGPDANVLAQMQATVKQAQ 310

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
              +  + +  +  +     +  Y++  + +  + + KN L      Y     +F   L 
Sbjct: 311 ASVDQAQASHNAAKEALTYAQQNYENRNQAKAQLDQAKNSLDQAEAAYKTTVAQFNQTLA 370

Query: 261 E-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
              S  +   Q + A   + L   E       + +PI   +              + PL+
Sbjct: 371 PPDSAAITAAQASVAQAQAALRQQEVALNNLKLTAPIDAIVAQVNGN-VGELPSAATPLV 429

Query: 320 KIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            +   +     + A+++   +  ++ G  A      Y D   K FK  +  + P     +
Sbjct: 430 VLNDANSDNLQVMAQISQSDVGKIQSGQPAEFTVSTYPD---KTFKGAVLMVYPEAVTTN 486

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   Y V L + +         L+ G    V  T  +
Sbjct: 487 GVTS----YNVQLSVDNAEGL-----LKPGMTTNVTITTGS 518



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 90/253 (35%), Gaps = 23/253 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +VS+SG I     +  +     G +    V+ G ++  G  + T +D      +   
Sbjct: 49  VTETVSASGTIQTPQQIK-LSFTAGGRLTSVAVKVGDRVQAGQTMATLDDANARAQVASA 107

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++ + +  ++  +        +   L++A   + +   D   + +     ++N   S+
Sbjct: 108 QANVASAQAKLEQTRRGA---TAEAIALQQANLDKAKAAWDGAKQAYENQLILYNDR-SA 163

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND--LN 217
             +++     ++ +  +   + +      +A LS+ Q   +       + AV   +  L 
Sbjct: 164 AQQAVVNAQNQVDTTAIQLRNAQAGLEAAQAKLSAAQAGPSEATLNAARTAVEAAERLLV 223

Query: 218 QQERIVYKSTLELRENIH------------EQKNMLRHINELYDEANLEFANYLKEISRD 265
             E  +  + ++L +                   ++R    +Y +A   +     +   +
Sbjct: 224 IAEDQLNNARIQLNDAYATPGPIGPDGLPTANTAVIRQAESVYHQAQSSY----NQSRVN 279

Query: 266 LEQNQRTFADEMS 278
           L   Q+  AD  +
Sbjct: 280 LANAQKQLADLQA 292


>gi|218781566|ref|YP_002432884.1| efflux transporter, RND family, MFP subunit [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762950|gb|ACL05416.1| efflux transporter, RND family, MFP subunit [Desulfatibacillum
           alkenivorans AK-01]
          Length = 391

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 83/274 (30%), Gaps = 52/274 (18%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            L +       V   G +      K    R+ S   + +  + + +  +  L+  QK+  
Sbjct: 84  RLEQMLVHQGDVVEAGQTVALVEHKSIQARLESAKADLVVSQAQLAQAKVTLADAQKEAD 143

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             + LF+    ++  L                                     +    L+
Sbjct: 144 RYEKLFKDGYCTEQQL------------------------------------TQRRTTLR 167

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                L  +Q   A   + +  +    ++ TI +PIAG I  + S +          +++
Sbjct: 168 TAQAGLAVSQANIAKNKASIGEIMVDLDEATIKAPIAGVISDDFSHTPGEMINTDTLIVE 227

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +V      Y R  V  + +  + KG      F      ++  ++  + +I P +      
Sbjct: 228 VV-GMDRLYARVNVAEQYVHRISKGMKV---FISLLGDKKGPYEGSVWRIQPTVDTATRT 283

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
            +              A ++++  +R G    V 
Sbjct: 284 TRVD------------ALANDSSAMRPGMFVTVF 305



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 4/112 (3%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G I   + V  +KS  SG +++  V  G  +  G  +   E       ++  K  +   +
Sbjct: 67  GTIEAVEQV-TVKSKVSGRLEQMLVHQGDVVEAGQTVALVEHKSIQARLESAKADLVVSQ 125

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFES---REEQLLDFLGKYHSTCSKVFNYG 156
             +   K  L     + D  EK F+     E+QL        +  + +    
Sbjct: 126 AQLAQAKVTLADAQKEADRYEKLFKDGYCTEQQLTQRRTTLRTAQAGLAVSQ 177


>gi|197118905|ref|YP_002139332.1| RND family efflux pump membrane fusion protein [Geobacter
           bemidjiensis Bem]
 gi|197088265|gb|ACH39536.1| efflux pump, RND family, membrane fusion protein [Geobacter
           bemidjiensis Bem]
          Length = 349

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 88/244 (36%), Gaps = 19/244 (7%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +E+  + ++   S+ Q+    +++     A+++ +  +   +    +   +E  +    +
Sbjct: 101 IESLKATIKRNASTIQQAQAAVRSDEASIALAKANAERYRNLSTDGSGTRQEAQNADTQL 160

Query: 241 LRHINEL-YDEANLEFANYLKEI-SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             H+  L  D+A +E A     I   DL++ + +     +     E       I++PI G
Sbjct: 161 QVHLAALDRDKAGVEAARQQTSILEADLKKAESSLERAKAVQAAAELNLSYTKIVAPIDG 220

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           TI   +S     +     PL+ +VP     YI A     Q+  ++ G + T+R      +
Sbjct: 221 TIAR-RSVRQGAFVTTGMPLLAVVPLD-KVYIEANFRETQLARIRPGQSVTIRVDTLPGV 278

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQ----------EYYEVILKITDLAFSDNNIELRNG 408
                   +  + P        +  Q          +   V + IT    +   + +  G
Sbjct: 279 ---VLSGSVASLSPASGASFAPVAPQNATGNFTKIIQRLPVRISITPGQVASGQLRV--G 333

Query: 409 FPAE 412
              +
Sbjct: 334 MSVQ 337


>gi|331012301|gb|EGH92357.1| multidrug resistance protein [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 402

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 84/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   ++ + +  R  + + Q++    ++L    A+SQ
Sbjct: 101 EVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRTAVQTAQENYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +  EL                       + +  +  +   +  +    
Sbjct: 161 EELSHSRDSLTSAQSELNN------------------IQQQLSTSVALVDDTVVSSHPDV 202

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               S+L        + T+++P+ G +   +S       Q     M ++P      I A 
Sbjct: 203 KAAASQLRQAFLANARSTLVAPVTGYVAK-RSVQLGQRIQPGTATMAVIPLD-QLLIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--------- 384
               Q+  ++ G    +    Y      K+   I+ +          L  Q         
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGSDV--KYSGTIDSLGAGTGSAFALLPAQNATGNWIKI 318

Query: 385 -EYYEVILKITDLAFSDNNIEL 405
            +   V + I     + + + +
Sbjct: 319 VQRVPVRVHINPEELAKHPLRI 340



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 13/188 (6%)

Query: 10  KRNHPASLKR----MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
            +  P   KR    + L  I+ I+GL  W+           + +     NVVEI    +G
Sbjct: 14  SQQTPKPGKRKFLLIGLAVIVVILGLAIWAWYEFYGQWSEETDDAYVNGNVVEITPLVTG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +     ++G  + +G  LL F+  +    +   + ++  +   +    S +D +  +  
Sbjct: 74  TVISIGADDGDLVHEGQVLLKFDPSDAEVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLA 133

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
               A ++ +E              +    G +     L      + S      +++ + 
Sbjct: 134 AQRTAVQTAQENY---------NRRRSLAAGGAISQEELSHSRDSLTSAQSELNNIQQQL 184

Query: 186 SLLRALLS 193
           S   AL+ 
Sbjct: 185 STSVALVD 192


>gi|116073680|ref|ZP_01470942.1| hypothetical protein RS9916_34557 [Synechococcus sp. RS9916]
 gi|116068985|gb|EAU74737.1| hypothetical protein RS9916_34557 [Synechococcus sp. RS9916]
          Length = 465

 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 53/371 (14%), Positives = 118/371 (31%), Gaps = 58/371 (15%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
            P     + L  +I + G   W+ L  I +SV  +G +L       I S  SG       
Sbjct: 27  TPPLRATLVLGGLIALAG-GFWATLARIPVSVQGTGVLLPVS---TINSSLSGT------ 76

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE------KSALDFLNNKYDV 126
            +GS +     +      E  +   L   +          E      +++   L++    
Sbjct: 77  -DGSAVY----MFNRSQQEWQEKARLFLATPMQFNDREMAELAVDIYEASQPGLHSATAN 131

Query: 127 LEKAFESR-EEQLLDFLGKYHSTCSKVF-----NYGISSVYRSLKMKLTRMRSIYLNRLD 180
            EK   SR  + L +       +  ++      +  +  +  ++      +R       +
Sbjct: 132 EEKTASSRFSDSLKEAFNGLKVSKGRLLLWVQSSAELEKLSSAIDQLNRTLRKSVEEMNN 191

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +  K  +L+    S    L  MK L  K  VS++ + Q++  + + + ++  N +E   +
Sbjct: 192 IVAKQEMLKNEYVSRSAYLESMKPLELKGFVSRSQILQEQATIDQLSSQMHGNDNELIRI 251

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
               ++ Y +   + A                                 + I +P     
Sbjct: 252 SSRKDQAYQKVRTQLAQL----------------------------VNNQLIFAPRD-VY 282

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPH--SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           +     +      + + LM++  +   + T I   ++ +++  V  G +A      Y   
Sbjct: 283 LSTIVPNDGESVTRGEVLMELSENRLDEPTMIPVFLSSREMAQVFPGMSALATPSGYKRS 342

Query: 359 REKKFKAIIEK 369
                K  +  
Sbjct: 343 EVGGIKGTVIS 353


>gi|226953527|ref|ZP_03823991.1| HlyD family secretion family protein [Acinetobacter sp. ATCC 27244]
 gi|226835705|gb|EEH68088.1| HlyD family secretion family protein [Acinetobacter sp. ATCC 27244]
          Length = 389

 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 101/305 (33%), Gaps = 31/305 (10%)

Query: 125 DVLEKAFE--SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           DVL K F+   R + L+      +         G+     SL  +   +     + +  +
Sbjct: 106 DVLVKDFDHVKRGQVLMHIDATTYDQKVTQAVSGVEQAQNSLANQTQAIAQRQADVVAAQ 165

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            K   ++A        L   + L    A S+++         K+  + + N+   K    
Sbjct: 166 AKLDQVKAQYDLSLAQLKRYQQLGNSGAASKSE-------QDKAAADAQNNLALLKQAQA 218

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
           +I        L     LK         +       ++L     T++  TI++P+ G  + 
Sbjct: 219 NI--------LVAQEALKTAQVAEAGLKAQVNSAQAQLDQANTTKDYSTIVAPLDGQ-LG 269

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
             +     Y      L+ ++P        A     QI ++K G  A+        ++ +K
Sbjct: 270 EVNPRVGQYVAAGSQLLYLIPQQTWVI--ANFKETQIANMKIGQKASFTVDA---MKHQK 324

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIE-LRNGFPAEVL 414
           F   +E+I P    +      +  T  + +V+ +I     +      IE LR G      
Sbjct: 325 FTGRVEQISPAAGSEFSVLKPDNATGNFTKVVQRIAVRIAINPDQEGIENLRPGMSVVTS 384

Query: 415 FTAKN 419
               +
Sbjct: 385 VDTDS 389


>gi|296285071|ref|ZP_06863069.1| secretion protein HlyD [Citromicrobium bathyomarinum JL354]
          Length = 356

 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 76/244 (31%), Gaps = 26/244 (10%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  R  ++  + +      L+++  +++ + +  +  V ++  ELR     + +   
Sbjct: 133 ASISAAREDIAFAEANFARKDALYKQGFLTKTEHDAAQHQVNQAREELRLAQARKASAQA 192

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + +         A                 A   ++    E    +  + +P AGT+  
Sbjct: 193 KLADGPAVPGQNPA----------------IAAGEAQKAGAELNLSRTEVRAPTAGTVTQ 236

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                      Q  P++ +V     +Y+ A      +  ++ G  A +R   Y  +    
Sbjct: 237 ADRLQIGQQIVQGLPVLTLV-EDGSSYVEANFKETDLDDMRVGQRAEIRVDAYPGL---V 292

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI------ELRNGFPAEVLFT 416
            K  +E I      + + L  Q      +K+T        I       L  G   +V   
Sbjct: 293 LKGEVETIGAGTGSEFSVLPAQNATGNWVKVTQRVPVKIRITSKSPRRLIAGLSTDVTVF 352

Query: 417 AKNT 420
             + 
Sbjct: 353 TDDR 356



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 93/312 (29%), Gaps = 33/312 (10%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
                 KR          +  ++ I G + WS L        ++     + + V I +  
Sbjct: 19  PATAPKKRRWRRIALMAVVPLLLLIGGFVYWSSL----QGKVATDNAYVQQDRVSISAEV 74

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I +  V +G ++  G  L   +           KV I      I   +++   L + 
Sbjct: 75  GGQIVEVLVADGDRVKPGQLLFRIDQ-------RPYKVQIAEANAAIAQAQASRTALTSD 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D+   +  +  E +      +             ++Y+   +  T   +          
Sbjct: 128 PDLTGASISAAREDIAFAEANF---------ARKDALYKQGFLTKTEHDAAQHQVNQARE 178

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +  L +A  +S Q        L +  AV   +         K+  EL  +  E +     
Sbjct: 179 ELRLAQARKASAQA------KLADGPAVPGQNPAIAAGEAQKAGAELNLSRTEVRAPTAG 232

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR--EQKTILSPIA---G 298
                D   +            L ++  ++ +   K T L+  R  ++  I   +    G
Sbjct: 233 TVTQADRLQIGQQIVQGLPVLTLVEDGSSYVEANFKETDLDDMRVGQRAEIR--VDAYPG 290

Query: 299 TIVYNQSFSSSN 310
            ++  +  +   
Sbjct: 291 LVLKGEVETIGA 302


>gi|238027580|ref|YP_002911811.1| Efflux pump membrane protein [Burkholderia glumae BGR1]
 gi|237876774|gb|ACR29107.1| Efflux pump membrane protein [Burkholderia glumae BGR1]
          Length = 405

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 85/273 (31%), Gaps = 32/273 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      + +L    LS  Q DL     + +  AVSQ
Sbjct: 97  RVALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRETDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 157 EE------------------IAHARDAVKAAQASVDAARQQLASNRALTANTTVADHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        +  + +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 LAAAAKVRDAYLANARNMLPAPVTGYVAK-RSVQVGQRVAPGTPLMSVVPLNG-VWVEAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ H++ G    +    Y      K+   +              P  +   N ++ 
Sbjct: 257 FKEVQLTHMRIGQPVELTADIYGSSV--KYHGKVVGFSAGTGSAFSLLPAQNATGNWIKV 314

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   V + +       + + +      +V   
Sbjct: 315 VQRLPVRIALDPQQLQQHPLRIGLSMQVDVDIK 347



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 56/182 (30%), Gaps = 10/182 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +     ++   +  G PL+  +  +    +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVNADDTQTVTAGAPLVVLDPADARVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + E      ++ L   L   +  +   +   +   +V  +      
Sbjct: 116 GLFVNDDQYRAQVALRETDLSKAQDDLRRRLAVAQTGAVSQEEIAHARDAVKAAQASVDA 175

Query: 170 RMRSIYLNRLDLENKSSL-----LRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
             + +  NR    N +       L A        L   +N+        V++  +   +R
Sbjct: 176 ARQQLASNRALTANTTVADHPNVLAAAAKVRDAYLANARNMLPAPVTGYVAKRSVQVGQR 235

Query: 222 IV 223
           + 
Sbjct: 236 VA 237


>gi|300859306|ref|YP_003784289.1| hypothetical protein cpfrc_01889 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686760|gb|ADK29682.1| hypothetical protein cpfrc_01889 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206991|gb|ADL11333.1| Putative efflux system protein [Corynebacterium pseudotuberculosis
           C231]
 gi|302331553|gb|ADL21747.1| Putative efflux system protein [Corynebacterium pseudotuberculosis
           1002]
 gi|308277244|gb|ADO27143.1| Putative efflux system protein [Corynebacterium pseudotuberculosis
           I19]
          Length = 563

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 49/405 (12%), Positives = 120/405 (29%), Gaps = 52/405 (12%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +   V   G +              G I     + G ++     L   +       + 
Sbjct: 56  SEVANRVLVEGTVEPIRTATLYTHLT-GPIASISTKVGDKVSTDQLLAKIDTSTAQTELA 114

Query: 98  LKKV----SIKNLRCHIDTEKSALDFLNNKYDV-----LEKAFESREEQLLDFLGKYHST 148
            ++     S+       +T +   D L ++ D      +  A   + +   +++    + 
Sbjct: 115 SQRATAAQSLNQAMAQAETAQQQYDQLKSRLDQGLNAEINTANAQQRQANEEYIKAQQAF 174

Query: 149 CSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             K  +     +   RS    + + R   ++      ++  + A   +        +N  
Sbjct: 175 DRKAQDRQQVNTPELRSQDAAVKQARDQLISAALDAARTGAVTAFGIAGSSQNDDSQNQA 234

Query: 207 EKNAV-------------------------SQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +  +                          +Q  L++ ER    +   +   + + +  +
Sbjct: 235 QGPSQSPSGSGQSVVESVIGSADSLVKLNSAQRQLSEAERNYISTLATVDRELSDSQRAV 294

Query: 242 RHINELYDEA-----NLEFANYLKEISRDLEQNQRTFADEMSK------LTILEKTREQK 290
            +  E + EA       EFA   +    +L  NQ       ++      L  L+      
Sbjct: 295 ANAFETHKEASTNAAAAEFAAQQQLAQHELAINQAWRGANTAQDASALTLNKLQLDINSS 354

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P +G +      +        + L+ I        + A V    +  ++     T+
Sbjct: 355 DVRAPFSGVV--MAVPAQQGKPAAGEGLVTIG-DDSSLIVNADVKEADVAKLRVSDKVTL 411

Query: 351 RFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
                     + + K I+    P  S  +N  +T+  Y V +++T
Sbjct: 412 TSTSSGTKTFQGRIKKIVNVAKPAASGSENAGKTKPLYPVEIELT 456


>gi|254563429|ref|YP_003070524.1| multidrug resistance secretion protein [Methylobacterium extorquens
           DM4]
 gi|254270707|emb|CAX26712.1| putative multidrug resistance secretion protein (emrA-like)
           [Methylobacterium extorquens DM4]
          Length = 401

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 42/365 (11%), Positives = 102/365 (27%), Gaps = 85/365 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V NG  + +G  +   +D +    +      +      I             
Sbjct: 100 SGYLAAVPVVNGQAVKRGDVIARLDDGDYRLALKAAADKLATQESTIAR----------- 148

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              + +  E+ + Q+L    +  +  +     G +   R+  M+                
Sbjct: 149 ---VGRQAEAAQAQVLQSAAQIDAAKADAVRAG-ADYARATGMQAD-------------- 190

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                                      V+++ L+Q +    ++   ++           +
Sbjct: 191 --------------------------FVAKSRLDQAKADRDRTEAAVKSAEAALVAARAN 224

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +  L  +                 + Q   A+  +      +  +   I +P  G +V N
Sbjct: 225 VEVLKAQTR---------------EAQNLAAELRTAADRARRDLDFAVIRAPFDG-VVGN 268

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++  +  Y      +  +VP  +   + A     Q+  V+ G    +    Y D      
Sbjct: 269 KAVEAGAYVSPGSRIAALVPL-QSVRVDANFKETQLARVRPGQEVHIHVDAYPDR---DI 324

Query: 364 KAIIEKIDPII----SQQDNNLQTQEYYEVILKIT-----DLAFSDNNIELRNGFPAEVL 414
              +E + P      S    +  T  + +++ ++          +   + LR G    V 
Sbjct: 325 VGTVESLSPASGSVFSLLPPDNATGNFTKIVQRLPVRVHVPEDVAREGL-LRPGLSVVVK 383

Query: 415 FTAKN 419
              + 
Sbjct: 384 VDTRE 388


>gi|225155422|ref|ZP_03723914.1| efflux transporter, RND family, MFP subunit [Opitutaceae bacterium
           TAV2]
 gi|224803878|gb|EEG22109.1| efflux transporter, RND family, MFP subunit [Opitutaceae bacterium
           TAV2]
          Length = 453

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 76/256 (29%), Gaps = 50/256 (19%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             ++        D + +    ++ L   + D      LF+K  +S +D       +  + 
Sbjct: 108 QAQVEQQEAALADAQARHLQAKSQLIKAEADHRRAAELFKKGLISDSDQLNASTELDIAR 167

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             +     + +     + ++                                        
Sbjct: 168 TSVEAAAAQIRRAEGTLKQMR------------------------------------DLL 191

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQ----PLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           ++ T+ SPI GTI    S          Q     ++++        +R KV    I +VK
Sbjct: 192 DKTTVYSPIDGTISLLSSELGERVVGTGQFAGTEILRVANLGD-MEVRVKVNENDIINVK 250

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDNN 402
            G  A V    +       F   +++I    +    N Q +   +EV ++I+       +
Sbjct: 251 IGDRARVTIDAFPRRT---FDGTVKEIASSATTTGANTQEEVTNFEVRVRISS-----GD 302

Query: 403 IELRNGFPAEVLFTAK 418
             LR G  A      +
Sbjct: 303 AALRPGMSASAEIETQ 318



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 56/142 (39%), Gaps = 5/142 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +I+  I  +VS++G+I  E  V    SP  +G I +     G+ + +G  L   +     
Sbjct: 51  AIVKTITQTVSATGKIQPEVEVKI--SPEVAGEIIELPFREGADVKKGDLLFRIKPDNYQ 108

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             ++ ++ ++ + +      KS L  +  + D    A   ++  + D      ST   + 
Sbjct: 109 AQVEQQEAALADAQARHLQAKSQL--IKAEADHRRAAELFKKGLISDSDQLNASTELDIA 166

Query: 154 NYGISSVYRSLKMKLTRMRSIY 175
              + +    ++     ++ + 
Sbjct: 167 RTSVEAAAAQIRRAEGTLKQMR 188


>gi|330888114|gb|EGH20775.1| RND family efflux transporter MFP subunit [Pseudomonas syringae pv.
           mori str. 301020]
          Length = 317

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 72/182 (39%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+ P     +  L +  +I +  W I+                IE SV++ G +    
Sbjct: 1   MKRSRPPRRALLVALCLFPVIAVCAWQIMPDSKGHAATVTVTRSNIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  +G I K   + G Q+ +G  L+  +       +D  + +I+NL+  +  ++
Sbjct: 61  YV-DVGSQATGQIMKIHAQVGDQVKEGDLLVEIDPSTQKARLDAARYAIENLKAQLQEQR 119

Query: 115 SALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    K      L     +R E +     ++ +T ++V  F   I     +L+    
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEAQAALRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 AL 181



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 3/134 (2%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIYAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTA 348
           +   I HVK G TA
Sbjct: 230 SEADIGHVKPGMTA 243


>gi|295101542|emb|CBK99087.1| RND family efflux transporter, MFP subunit [Faecalibacterium
           prausnitzii L2-6]
          Length = 541

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 54/419 (12%), Positives = 132/419 (31%), Gaps = 57/419 (13%)

Query: 32  ITWSILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           +T++   P+   VS     +G +    N   +KS   G I     E G ++ +G  L T 
Sbjct: 61  VTYAETTPVRQDVSNSLSGTGTLNPA-NTYTVKSLVDGKILTGGFEEGDKVEEGDVLYTI 119

Query: 88  EDIETTDLIDLKKVSIKNLRCH------IDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           +  + +  ++   ++++  +        +   ++ +D   +   V +    +  +++   
Sbjct: 120 DSSDASTNLEKASIALQQAQRSYDKTVDLQYVRAEVDGTVSSLKVAKGDQVTSGQEVAVI 179

Query: 142 LGKYHSTCSKVFNYGISSVYR-------SLKMKLTRMRSIYLNRLDLENKS--SLLRALL 192
                   + +F    ++ +         L      ++         +  S  +LL   +
Sbjct: 180 RDSSKMLLNLLFPAADAANFSVGQSADVMLDGTFETLKGTITAITGTDELSTGNLLARTV 239

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +    +   +    +    S N ++      +    E R    +    +  IN    +A 
Sbjct: 240 TIRVNNAGGLTT-AQAATASVNGVSSIASATFAYQAE-RTLTAQAGGTVSAINVQEGDAV 297

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTIL----EKTREQKTILSPIAGTIVYNQSFSS 308
            +    ++    DL ++ ++ ++ +    I     +      TI SPI+GTI+  +    
Sbjct: 298 SKGDILIELTGDDLTESIQSASESLRSAEISMQNQQDNMSNYTITSPISGTIIE-KDAKQ 356

Query: 309 SNYAQQSQPL--------MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            +       L        +++V +             QI  +  G    +     AD   
Sbjct: 357 GDALTSGSTLCVIYDLSYLEMVINVDEL---------QIGALSVGQKVQITADAVADKTY 407

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 + ++    S           Y + ++I +         LR G  A        
Sbjct: 408 V---GTVTRVSMKGSSSGGTTT----YPITIRIDNTD------GLRPGMNANAEIVVAE 453


>gi|319784286|ref|YP_004143762.1| secretion protein HlyD family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170174|gb|ADV13712.1| secretion protein HlyD family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 393

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 104/318 (32%), Gaps = 29/318 (9%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            ++   K ++        V    F+++  +  D L        ++      +     ++ 
Sbjct: 79  ANLQQAKVSIASDTAGRIVKVDIFDNQLVKQGDELFAIDPEPYRIALAQADAAVAGARLN 138

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           + ++R+ Y   +    +     + ++  Q       +L +K   +++ L++ +  + K+ 
Sbjct: 139 VEQLRAAYGQSM---AQQKSDASQVAFAQSQFDRAADLAQKGINAKSSLDEAKNDLDKAK 195

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L      ++ ++     L    ++E                 T    ++         
Sbjct: 196 QQLA---VAEQGIISAKAALGGNPDIE------------TDKHPTVMAALAARDKAAYDL 240

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            Q T+ +P  G +    SF    Y     PL  +V      +I A     Q+ H+K G  
Sbjct: 241 AQTTVKAPADGIVSQASSFKVGQYVGSGTPLFSLVETGDT-WIDANFKETQLTHMKPGQK 299

Query: 348 ATVRFPHYADIRE-------KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
           A +    Y                     + P  +   N ++  +   V L++TD   +D
Sbjct: 300 AEIVVDTYPGRTFEATVKAIGAGTGAEFSLLPAQNATGNWVKVTQRIPVRLELTD---AD 356

Query: 401 NNIELRNGFPAEVLFTAK 418
             + LR G  A V     
Sbjct: 357 AKMALRTGMSATVTVDTG 374



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 57/174 (32%), Gaps = 6/174 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR     L  + L + + + G   W      + + +++     +   V I S  +G I K
Sbjct: 43  KRRLGRFLLMVALPAALAVGGGYVWVTGGRYQETENAN----LQQAKVSIASDTAGRIVK 98

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS--ALDFLNNKYDVL 127
             + +   + QG  L   +       +     ++   R +++  ++         K D  
Sbjct: 99  VDIFDNQLVKQGDELFAIDPEPYRIALAQADAAVAGARLNVEQLRAAYGQSMAQQKSDAS 158

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           + AF   +      L +         +   + + ++ +      + I   +  L
Sbjct: 159 QVAFAQSQFDRAADLAQKGINAKSSLDEAKNDLDKAKQQLAVAEQGIISAKAAL 212


>gi|302381533|ref|YP_003817356.1| secretion protein HlyD [Brevundimonas subvibrioides ATCC 15264]
 gi|302192161|gb|ADK99732.1| secretion protein HlyD family protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 370

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/307 (9%), Positives = 99/307 (32%), Gaps = 11/307 (3%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E +   F+     ++    +    ++L    +       +     +     L      + 
Sbjct: 38  ESTDNAFVQADTTLVSPQIDGYVAEVLVSDNQRVEQGQILVRLDDADARAELAQAEANLA 97

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI--VYKSTLEL 230
           ++     +++ +++  +A++++    +   +   +         +  +R   V +  +E 
Sbjct: 98  ALLAAVDNVDARAAQEQAMIAARAAGVAQARAQADLAQAQVQRYSTLQREGWVSQQRIET 157

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            +   +         +    A    A  L        Q+        +++ + +   ++ 
Sbjct: 158 EQAGAQTAAASVAEAQAALVAEQRTAGVL---GSSRSQSLAAVEQARAQVELAQTNLDRT 214

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +P+AG +V  +   +  Y +    ++ +VP      + A     Q+  ++ G T  +
Sbjct: 215 VIRAPVAG-VVGARGVRAGQYVRPGGQMLSLVPLGDTYVV-ANFKETQLGRLRLGQTVHI 272

Query: 351 RFPHY-ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELR 406
               +       + ++         +       T  + ++  ++     ++ +     LR
Sbjct: 273 SADAFPDQDLTGRIESFAPATGAEFALIPVENATGNFTKITQRVPVRILVSRASGGAALR 332

Query: 407 NGFPAEV 413
            G   EV
Sbjct: 333 PGLSVEV 339



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 77/213 (36%), Gaps = 7/213 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            +K+  P  L  + +L +I + G + W+     E + ++      + +   +     G +
Sbjct: 6   AVKKRLPLILGAVVVLGLI-VGGGLWWTNKQRWESTDNA----FVQADTTLVSPQIDGYV 60

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT--EKSALDFLNNKYD 125
            +  V +  ++ QG  L+  +D +    +   + ++  L   +D    ++A +       
Sbjct: 61  AEVLVSDNQRVEQGQILVRLDDADARAELAQAEANLAALLAAVDNVDARAAQEQAMIAAR 120

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
               A    +  L     + +ST  +        +        T   S+   +  L  + 
Sbjct: 121 AAGVAQARAQADLAQAQVQRYSTLQREGWVSQQRIETEQAGAQTAAASVAEAQAALVAEQ 180

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                L SS  + L  ++    +  ++Q +L++
Sbjct: 181 RTAGVLGSSRSQSLAAVEQARAQVELAQTNLDR 213


>gi|189459955|ref|ZP_03008740.1| hypothetical protein BACCOP_00589 [Bacteroides coprocola DSM 17136]
 gi|189433328|gb|EDV02313.1| hypothetical protein BACCOP_00589 [Bacteroides coprocola DSM 17136]
          Length = 364

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 105/360 (29%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IKK       ++ +G  LL  +D          K+ +      +    +    +   
Sbjct: 76  SGYIKKIYFTEHQEVHKGDTLLVLDD-------REYKIRVMETEAALKDALAGATVIGAT 128

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +                                                     + 
Sbjct: 129 LQTTQTTASV-----------------------------------------------YDA 141

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             S +   L+  +KD    +NL ++NA +   L Q E        +L     ++   L  
Sbjct: 142 SISEIEIRLAKLEKDRQRYENLVKRNAATPIQLEQIETEYSALQRKLEATKRQRSAALSG 201

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +N               E+S   E  +       + L + +       +++P  G  +  
Sbjct: 202 VN---------------EVSHRRENVEAGIQRATAALEMAKLNLSYTVVVAPCDGK-LGR 245

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     Y    Q +  I+P ++   I A     Q++++  G    ++      +  K+F
Sbjct: 246 RALEEGQYITAGQTITYILPDTQKWVI-ANYKETQVENLAIGQEVRIKVDA---VSNKEF 301

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
              I  I           P  +   N ++ Q+   V +   +L+  DN+  L  G    V
Sbjct: 302 TGKITAISGATGAKYSLVPTDNSAGNFVKIQQRIPVRIDFINLSEEDND-RLAAGMMVVV 360


>gi|313499811|gb|ADR61177.1| Multidrug efflux MFS membrane fusion protein, putative [Pseudomonas
           putida BIRD-1]
          Length = 381

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/354 (10%), Positives = 98/354 (27%), Gaps = 67/354 (18%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + + +V +   +  G  L+  ++              ++ R  +D  ++ +       
Sbjct: 73  GYVAEVEVADDQPVKAGDVLVRLQN--------------RDYRARLDQARAGVTEAQAAL 118

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              + + +   E                                 R+       L  E  
Sbjct: 119 AAAQASQQVATE---------------------------------RIDQQQQAILQAEAV 145

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                A     + D+   + L   +A +   L        ++   L+      +     +
Sbjct: 146 VRSATAEQRRSELDVQRYRGLVRDDAATVQRLETASAHASQAQAALQGAQAALRQQRSQL 205

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                ++    A   +             A   +   + E+  +   I +PI G +   +
Sbjct: 206 AMAKAQSAQAEAKQQQ--------RAAALARAQAHQQLAEQDEQDTVIRAPITGVVGQRR 257

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +   Y    QPL+ +VP  +   + A     Q+  ++ G    +R   +A        
Sbjct: 258 VRT-GQYVVPGQPLLAVVPLQQAYVV-ANYKETQLARMRPGQPVEIRVDSFASQ---PLH 312

Query: 365 AIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRNGFPA 411
             +    P      +   ++  T  + +++ +       D  +   ++  G   
Sbjct: 313 GHVASFSPASGNVFALLPSDNATGNFTKIVQRFPVRILLDKPLDGPQVLPGMSV 366


>gi|296185626|ref|ZP_06854035.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
 gi|296049754|gb|EFG89179.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
          Length = 326

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/347 (12%), Positives = 108/347 (31%), Gaps = 89/347 (25%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V+ GS++ QG  ++  +                                      
Sbjct: 65  VTQISVDVGSKVNQGDVIIKLD-------------------------------------- 86

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                +  + Q+       ++  + + N    S    ++ +              +    
Sbjct: 87  ----AQDLQAQVDKAQATVNTARANLANASSGSRPEQIEQE--------------QAIVD 128

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                  + +K    ++ L    + +Q  L+  ++ +  +  + +    + + +      
Sbjct: 129 GAAQGYETAKKTYDRIQALVSSGSEAQQQLDLAKQQLASAEGQYKSAQAQLELLKNG--- 185

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                           S  ++  +    +  + L I + +    TI +PI+GT+      
Sbjct: 186 --------------PTSSSIDVFKAQVNEAEAGLKIAQTSLNNATITAPISGTVNAKNIN 231

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                A     L+ I  +S    + A    + +  +K+G    ++     D   K+F+  
Sbjct: 232 -VGETASPGTTLVSIS-NSGALCVNAYAPVEIVNGLKEGQDVMIKVSEIPD---KEFQGK 286

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           I  I+  +S +  N        +++K++     D N  L+ G  AEV
Sbjct: 287 ITVINSKLSSESRN--------ILVKVS---VVDPNSLLKPGMFAEV 322


>gi|116073127|ref|ZP_01470389.1| possible membrane fusion protein [Synechococcus sp. RS9916]
 gi|116068432|gb|EAU74184.1| possible membrane fusion protein [Synechococcus sp. RS9916]
          Length = 391

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 93/274 (33%), Gaps = 38/274 (13%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           ++  R      +    +   +R +  S ++   +   L E+  V    + + + +     
Sbjct: 67  VSAERGTLPGVVTASGELEAVRRVNVSPKRQGVLNALLVEEGDV----VRKGQVLARMDP 122

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANY-------------LKEISRDLEQNQRTFA 274
            +LR+ + E K + R     YD    +F                L +       +Q   A
Sbjct: 123 GDLRDRLDELKALERQAQADYDARQADFRRRDILFQRGAISAADLDDFRARYLTSQAALA 182

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--------IVPHSK 326
               ++       +   I +P  G I   +      +   +             IV  S+
Sbjct: 183 AAQERIEQRSVESDDLLIRAPFDGVITQ-RFAEPGAFVTPTTTASATAGATSSSIVELSQ 241

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + AKV    I  ++ G +A+VR   Y D R   F+A + +I P   + DN       
Sbjct: 242 GLEVAAKVPESDIGRIRVGQSASVRVDAYPDQR---FEARVREIAPRAVKTDNVTS---- 294

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +EV L +   A      +LR G   +V F    T
Sbjct: 295 FEVELDLIGPAP-----DLRIGMTVDVDFQTGRT 323



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 52/134 (38%), Gaps = 5/134 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   V++SGE+      V +     G++    VE G  + +G  L   +  +  D +D  
Sbjct: 74  LPGVVTASGELEAV-RRVNVSPKRQGVLNALLVEEGDVVRKGQVLARMDPGDLRDRLDEL 132

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K   +  +   D  ++       + D+L +        L DF  +Y ++ + +       
Sbjct: 133 KALERQAQADYDARQADF----RRRDILFQRGAISAADLDDFRARYLTSQAALAAAQERI 188

Query: 160 VYRSLKMKLTRMRS 173
             RS++     +R+
Sbjct: 189 EQRSVESDDLLIRA 202


>gi|325925044|ref|ZP_08186466.1| multidrug resistance efflux pump [Xanthomonas perforans 91-118]
 gi|325544556|gb|EGD15917.1| multidrug resistance efflux pump [Xanthomonas perforans 91-118]
          Length = 400

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 91/322 (28%), Gaps = 28/322 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L+         +     K  V +       + LL    + +    +     I++    + 
Sbjct: 77  LQADSVAVAPRVSGYVTKVLVSDNQIVEAGQPLLQIDDRTYQATLQQAEAAIAARQADIV 136

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                + +     L    + +   A L   Q ++     L    A +       +  + +
Sbjct: 137 AATANVSAQESALLQARTQVTAAAASLKFAQAEVKRFAPLAASGADTHEHQESLQHDLAR 196

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  +      + K     I                     LEQ Q       +       
Sbjct: 197 ARAQYDAAQAQAKAGESQIQAS---------------RAQLEQAQAGVKQATADADQARV 241

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             E   + S I G +  +++     +       M IVP   L  + A     Q+  ++ G
Sbjct: 242 AVEDTRLTSRIHGRV-GDKTVQVGQFLGAGTRTMTIVPQESLYLV-ANFKETQVGLMRPG 299

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLA 397
             A +     + ++       +E + P    Q         T  + +V+    ++I  LA
Sbjct: 300 QPAEIEVDALSGVK---LHGKVESLSPGTGSQFALLPPENATGNFTKVVQRVPVRIRVLA 356

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             +    L  G   EV    ++
Sbjct: 357 GEEARKVLVPGMSVEVTVDTRS 378


>gi|126728706|ref|ZP_01744521.1| putative secretion protein [Sagittula stellata E-37]
 gi|126710636|gb|EBA09687.1| putative secretion protein [Sagittula stellata E-37]
          Length = 334

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/205 (11%), Positives = 61/205 (29%), Gaps = 24/205 (11%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           + + ++   +   +  +    RA L+  Q       +LF+K  V++  L+Q      ++ 
Sbjct: 93  VQQTKASITDLSSVSAQVDSARAALTDAQDSYDRTASLFKKGDVAKAALDQATTTRDQAN 152

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             L        +                    +E +     +        ++LT+ +   
Sbjct: 153 AALDSAQSALASA-------------------RERAGQAGDDNPAVRAAKAQLTLAQINL 193

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +  + +P+ G +                 +  +V      +I A      +  ++ G  
Sbjct: 194 ARAKVTAPVPGWVSNLDLR-PGALVSPGMAVFSLV-EDGDWWIDANFKETDLARLRPGQP 251

Query: 348 ATVRFPHYADIREKKFKAIIEKIDP 372
            TV    Y  +        ++ +  
Sbjct: 252 VTVDIDMYPGL---SLDGTVKSLGA 273



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 47/160 (29%), Gaps = 2/160 (1%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           NV+ I     G ++   V     +  G  L   +  +    +   + S            
Sbjct: 41  NVLTIAPQVGGAVETVAVTENQHVKAGDLLFQIDTNDLAAQVAAAQASYDAAVQQTKASI 100

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHS-TCSKVFNYGISSVYRSLKMKLTRMRS 173
           + L  ++ + D    A    ++        +     +K      ++        L   +S
Sbjct: 101 TDLSSVSAQVDSARAALTDAQDSYDRTASLFKKGDVAKAALDQATTTRDQANAALDSAQS 160

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVS 212
              +  +   ++      + + +  LT+ + NL      +
Sbjct: 161 ALASARERAGQAGDDNPAVRAAKAQLTLAQINLARAKVTA 200


>gi|219847304|ref|YP_002461737.1| secretion protein HlyD family protein [Chloroflexus aggregans DSM
           9485]
 gi|219541563|gb|ACL23301.1| secretion protein HlyD family protein [Chloroflexus aggregans DSM
           9485]
          Length = 520

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/332 (11%), Positives = 103/332 (31%), Gaps = 19/332 (5%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +++++ ++   + + + + +                  +  +  + L K+     
Sbjct: 205 QAEANLNIQRTNLSAAKTNAELQVTLAANALRDAQQAYSDLYWQNREREEQLAKFGLELP 264

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           K        + R+++    R +   L      +N+   + A  +  +   + ++ L +  
Sbjct: 265 KEAKDAEEQLLRAVESAEARYKQAQLVYEQARQNEIDGIAAAEAQVRTARSNLQRLLDGP 324

Query: 210 AVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                          ++TL+ LR +                 ANLE         ++L  
Sbjct: 325 TADLIAAADAAVAQAQATLDRLRGDQRAGALAAAQAGVAAARANLERITAPP-TRQNLAT 383

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKL 327
            +       + L   +   E+  + +P  G +         + A     P ++IV     
Sbjct: 384 VEAALKAAEAALAATKLNLEKSVLRAPFDGIVARVNVD-PGDLAGTGALPAVQIV-DDSE 441

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
            ++ A ++   +  V++G +  VR           F   ++ + P+ +   N       +
Sbjct: 442 LHVEAAISDTDVARVREGQSVEVRVDALPGT---VFTGTVDFVAPVANTVGNVRT----F 494

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            V +K+           LR G    +      
Sbjct: 495 TVRIKLGKQE------SLRAGMSVRITILTDK 520



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 85/258 (32%), Gaps = 9/258 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I + V++SGE++   +  ++     G++ +  VE G ++  G PL+  +  E    +   
Sbjct: 63  ISLGVTASGEVVARSSA-DLSFRVPGVVAEVFVEAGDRVKAGDPLVALDARELELQVTQA 121

Query: 100 KVSIKNLRCHIDTEKSA-----LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           + ++   R + +          +  +  +    E A       + D          +   
Sbjct: 122 EANLAQARANYERLIEGATPEEIAAVRAQVAQAEAALRQVRGSVTDADIAAAEAALQQAI 181

Query: 155 YGISSVYR--SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
              + +    S         ++     +L  + + L A  ++ +  +T+  N       +
Sbjct: 182 ARRNDLLDGPSEAELTAARSAVEQAEANLNIQRTNLSAAKTNAELQVTLAANALRDAQQA 241

Query: 213 QNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            +DL  Q R   +   +    +  E K+    +    + A   +        +  +    
Sbjct: 242 YSDLYWQNREREEQLAKFGLELPKEAKDAEEQLLRAVESAEARYKQAQLVYEQARQNEID 301

Query: 272 TFADEMSKLTILEKTREQ 289
             A   +++       ++
Sbjct: 302 GIAAAEAQVRTARSNLQR 319


>gi|323140564|ref|ZP_08075489.1| efflux transporter, RND family, MFP subunit [Phascolarctobacterium
           sp. YIT 12067]
 gi|322414917|gb|EFY05711.1| efflux transporter, RND family, MFP subunit [Phascolarctobacterium
           sp. YIT 12067]
          Length = 357

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 86/269 (31%), Gaps = 29/269 (10%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT------MMKNLFEKNAVSQN 214
           Y+S ++  T ++   + + ++    S   AL +    D++      +++ L ++N     
Sbjct: 29  YQSTQVTTTAVKMGEVKKGNIMQTVSATGALSAQDNVDISSKITGRIVEVLVKEN----Q 84

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            +N  + +V      L   + + +  L +    Y E NL   N         +  +  + 
Sbjct: 85  HVNAGDVLVRLDATSLNATLAQMQAKLHNAQANY-ERNLNLLNRGAISQSTFDSVEADYL 143

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS----QPLMKIVPHSKLTYI 330
              S             I +PI+G I+  +               Q +M  V       I
Sbjct: 144 VAKSNYEKAASDVNDTVITTPISGYIIG-KPTPVGQTISSGISTPQVIMS-VATLDNMEI 201

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A V    I  VK G         Y +     F   +  I    + ++N +    YY+V 
Sbjct: 202 EALVDESDIGQVKDGQKVKFTVDAYPNET---FTGKVRLISRSATTENNVI----YYKVY 254

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + + D        +L     A        
Sbjct: 255 VTVDDA-----KGKLLPTMTARTEIIIDE 278



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 5/121 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  +VS++G +  +DNV +I S  +G I +  V+    +  G  L+  +       + 
Sbjct: 47  GNIMQTVSATGALSAQDNV-DISSKITGRIVEVLVKENQHVNAGDVLVRLDATSLNATLA 105

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  + N + + +   + L    N+  + +  F+S E   L     Y    S V +  I
Sbjct: 106 QMQAKLHNAQANYERNLNLL----NRGAISQSTFDSVEADYLVAKSNYEKAASDVNDTVI 161

Query: 158 S 158
           +
Sbjct: 162 T 162


>gi|167587334|ref|ZP_02379722.1| efflux pump membrane protein [Burkholderia ubonensis Bu]
          Length = 407

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 86/271 (31%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      +  L ++ LS  + DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLFVNDDQYRAQVVLRQSDLSRAEDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVKGAQASLDTAQQQLASNRALTANTTIASHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 LAAAAKVRDAYLANARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q+ H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLNHMRIGQPVELTADIYGSSVVYHGKVIGFSAGTGSAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++       + + +      +V   
Sbjct: 317 RLPVRIELDPKDLEKHPLRIGLSMQVDVNIK 347



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/181 (10%), Positives = 55/181 (30%), Gaps = 10/181 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G  L+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKAGDSLVLLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                  +     +  + D+     + R    +   G             +     SL  
Sbjct: 116 GLFVNDDQYRAQVVLRQSDLSRAEDDLRRRLAVAQTGAVSQEEISHARDAVKGAQASLDT 175

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
              ++ S      +  + +  ++L A        L   +N         V++  +   +R
Sbjct: 176 AQQQLASNRALTANTTIASHPNVLAAAAKVRDAYLANARNTLPAPVTGYVAKRSVQVGQR 235

Query: 222 I 222
           +
Sbjct: 236 V 236


>gi|116628374|ref|YP_820993.1| lactococcin A ABC transporter permease protein [Streptococcus
           thermophilus LMD-9]
 gi|116101651|gb|ABJ66797.1| lactococcin A ABC transporter permease protein [Streptococcus
           thermophilus LMD-9]
 gi|312279002|gb|ADQ63659.1| Lactococcin A ABC transporter permease protein [Streptococcus
           thermophilus ND03]
          Length = 455

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 56/409 (13%), Positives = 129/409 (31%), Gaps = 32/409 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKS-PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           E++V+S G I     +  I+S   + II    V N   + +G  L+ + +       +  
Sbjct: 44  EVTVTSRGSIEPTKVIAVIQSTSDNTIIDNQLVAN-KVVKKGDTLVQYSETMEASQKEGL 102

Query: 100 KVSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFESR--------EEQLLDFLGKYHST 148
           +  ++ L+     + T +S+L    N +   E  F  +        + Q +D      +T
Sbjct: 103 QKQLELLKRQESGLKTLQSSLTQGTNLFQEQEDEFGYQSTFNTYLSQAQDIDLGVAKTNT 162

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
                    S+   ++  +++++++       L    +     L         +     +
Sbjct: 163 EVNNQAAIASNTGSAIDNQISQLQTQVSEYEALSQAITNHETTLPEGNPHQATLNAYNSQ 222

Query: 209 NAVS---------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            A +          + +N     +  S   L         ++ + N    +       +L
Sbjct: 223 YATTPDASVTDQYLSQVNTNISSLNASIGNLEIQKAGTGTVVTYDNSDSTKKEALKNQFL 282

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +   + L   +    D  SK+   +       I SP  G +  +Q+   +  A     L 
Sbjct: 283 QNAGQQLSSVETQINDTESKINQADVLLTNTLIQSPEDGILHLSQADKKATMAATGTELA 342

Query: 320 KIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           ++ P    ++   I   V    +  ++KG +  +      +         +E ID   ++
Sbjct: 343 QLYPDMTQTQEVAITYYVNSDYVPKLQKGQSVRLTLDKVGNHGT-TIIGKLESIDNSATE 401

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            +        + V  + +       N+    G    V       T    
Sbjct: 402 TERGNV----FRVTARASISEKEAQNLRY--GLEGRVTSVIDQKTYFNY 444


>gi|253563930|ref|ZP_04841387.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251947706|gb|EES87988.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 344

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 108/381 (28%), Gaps = 90/381 (23%)

Query: 48  GEILNEDNVVEIKSPF------SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           G +   DN    +          G IKK        + +G  L   ED E    +     
Sbjct: 33  GNVEFTDNAQVRQHIVPINCRIQGFIKKIYFTEYQAVHKGDTLALIEDAEFRFRL----- 87

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                   +  E    + L+ K  V                                   
Sbjct: 88  --------VQAEADYQNALSGKSVVT---------------------------------- 105

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                  + + +I  N    +      +  + + +++    +NL E++AV++   +  + 
Sbjct: 106 -------SSIHTIQNNISVSDAGIQEAKVRMDNAEREYKRYQNLLERDAVTRQQYDAVKT 158

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               S                   EL        A   +E +  LEQ +       + L 
Sbjct: 159 NFDASKARY---------------ELLFRQKKSTALVKQEQTERLEQTEAGIKLAEATLE 203

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           I         I++P  GT    +        Q  Q L+ +V       + A     Q  H
Sbjct: 204 IARLNLSYTVIIAPCDGT-TGRKEIREGVLVQPGQTLVNLVDDHDKWVV-ANYKETQTAH 261

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVIL 391
           + +GY   +       I    FK I++ +           P  +   N ++ ++   V +
Sbjct: 262 IGEGYPVGIEVDAIPGI---MFKGIVKSVSQATGASFSLLPQDNSAGNFVKVEQRIPVRI 318

Query: 392 KITDLAFSDNNIELRNGFPAE 412
           + T     ++   LR G   E
Sbjct: 319 EFTGENRPEDMKRLRAGMNVE 339


>gi|71737576|ref|YP_273960.1| HlyD family secretion protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71558129|gb|AAZ37340.1| HlyD family secretion protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 385

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 47/388 (12%), Positives = 113/388 (29%), Gaps = 87/388 (22%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PIE + ++      +     I    SG + +  V++   +  G  L+  +D        
Sbjct: 64  SPIESTENAQ----VKGQTTLIGPQLSGYVYEVPVQDFQFVKAGDLLVRLDD-------R 112

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + +  +      +  +K++L     +    E     R+ +L + + +   + +       
Sbjct: 113 IYRQRLDQAIAQLAVQKASLANNLQQRRSAEATIGQRQAELQNSIAQSRKSAA------- 165

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                                                   DL   + L    +VS+++L 
Sbjct: 166 ----------------------------------------DLRRNQALVTDGSVSKSEL- 184

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                V ++          +   +  I              L+ +  +    + + A+  
Sbjct: 185 ----DVTRAADAQANAAVAEARAVLQIA----------REDLQTVIVNRGSLEASVANAQ 230

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + + +     +   I++P  G +          Y      LM +VP  +     A +   
Sbjct: 231 AAIELARIDLDNTRIVAPRDGQLGQIGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKET 287

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKI 393
           Q+ HV+ G   +            + +  +++I P    +      +  T  + ++  +I
Sbjct: 288 QMAHVRLGQPVSFTVDALDGH---EMRGHVQRISPAAGSEFSLLPADNATGNFVKISQRI 344

Query: 394 TDLAFSDNNIE----LRNGFPAEVLFTA 417
                 D +      LR G    V    
Sbjct: 345 PVRIVVDADQPMLEHLRPGMSVVVSIDT 372


>gi|254485596|ref|ZP_05098801.1| multidrug resistance efflux pump [Roseobacter sp. GAI101]
 gi|214042465|gb|EEB83103.1| multidrug resistance efflux pump [Roseobacter sp. GAI101]
          Length = 334

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 80/290 (27%), Gaps = 29/290 (10%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E Q +       S  +      + +        + +  +       L  +    RA L+ 
Sbjct: 60  ENQYVTAGDLLFSNKTDDLELAVQAAEARYDEAVQQAGAEITGLTSLTGQVDSARAALTD 119

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q        LF+   VSQ  L+Q      ++   L       K+  +       E    
Sbjct: 120 TQDTYDRTDALFKMGDVSQAALDQATTARDQAQAALDTAQAALKSGQKRAGAPGKEN--- 176

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                            +     S+LT  +    +  + +P +G I              
Sbjct: 177 ----------------ASVRAAQSQLTAAQINLARAQVTAPASGWIANFDLR-PGAIVAA 219

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF-------KAII 367
             P   +V      +I A      +  ++     TV    Y  +               I
Sbjct: 220 GVPQFSLV-EDGDWWISANFKETDLARLRPDQPVTVSIDMYPGLTLGGTVDSLGAGSGTI 278

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
             + P  +   N ++  + + V +++ D    D  ++LR G    V    
Sbjct: 279 FSLLPPQNASGNWVKVTQRFPVRIRL-DSRPDDPALQLRAGATVSVEIDT 327



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 60/200 (30%), Gaps = 3/200 (1%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             LK + L++ +  IG   W      E    S+ +   + NV+ I     G + +  V  
Sbjct: 2   KYLKPILLVATVAAIGGGLWLRW-QYESIHPSTDDAYLQANVLTIAPQVGGTVDQIAVVE 60

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              +  G  L + +  +    +   +            E + L  L  + D    A    
Sbjct: 61  NQYVTAGDLLFSNKTDDLELAVQAAEARYDEAVQQAGAEITGLTSLTGQVDSARAALTDT 120

Query: 135 EE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           ++     D L K         +   ++  ++     T   ++   +           ++ 
Sbjct: 121 QDTYDRTDALFKMGDVSQAALDQATTARDQAQAALDTAQAALKSGQKRAGAPGKENASVR 180

Query: 193 SSHQKDLTMMKNLFEKNAVS 212
           ++  +      NL      +
Sbjct: 181 AAQSQLTAAQINLARAQVTA 200


>gi|70731276|ref|YP_261017.1| multidrug resistance protein [Pseudomonas fluorescens Pf-5]
 gi|68345575|gb|AAY93181.1| multidrug resistance protein [Pseudomonas fluorescens Pf-5]
          Length = 400

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 81/219 (36%), Gaps = 22/219 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
             G+ S    L   + ++R +Y N   ++ + +  +A +   Q +    KNL    A+SQ
Sbjct: 100 EVGLQSAQAKLARTVRQVRGLYSNVDGMKAQVNAQQAEVQKAQDNFNRRKNLAAGGAISQ 159

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +   L       K  L+  + L D+  +     +   + DL Q   T 
Sbjct: 160 EELSHARDDLTSAQNAL----ANAKQQLKTTSALVDDTVVSSHPDVMSAAADLRQAYLTN 215

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A              + T+++P+ G +   ++       Q    LM ++P     +I A 
Sbjct: 216 A--------------RSTLIAPVTGYVAK-RTVQLGQRVQPGTALMAVIPLD-QLWIDAN 259

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               Q++ ++ G    +    Y      K+   ++ +  
Sbjct: 260 FKETQLRDMRIGQPVDIESDIYGSSV--KYSGTVDSLGA 296



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 64/179 (35%), Gaps = 9/179 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +  + L  ++ + G   W+    I     S+ +     NVVEI    +G +     ++
Sbjct: 22  RKVMLLVLAIVVALTGAGVWAYHEFIGRWNESTDDAYVNGNVVEITPLVTGTVVSIGADD 81

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L+ F+  +        +V +++ +  +      +  L +  D ++    ++
Sbjct: 82  GDLVHEGQVLINFDPNDA-------EVGLQSAQAKLARTVRQVRGLYSNVDGMKAQVNAQ 134

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           + ++      ++    K    G +     L      + S      + + +     AL+ 
Sbjct: 135 QAEVQKAQDNFN--RRKNLAAGGAISQEELSHARDDLTSAQNALANAKQQLKTTSALVD 191


>gi|88811809|ref|ZP_01127062.1| Secretion protein HlyD [Nitrococcus mobilis Nb-231]
 gi|88790693|gb|EAR21807.1| Secretion protein HlyD [Nitrococcus mobilis Nb-231]
          Length = 327

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 100/294 (34%), Gaps = 18/294 (6%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           ++ AFE         + +     S      +        ++  R +     +   + ++ 
Sbjct: 29  VQLAFEVTGRVAKLIVVEGERVRSGQVLAQLQPERYQHAVEQNRGQLTVAEQTLAKLEAG 88

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                ++  + +++  +   +        L   E     S  ++ +     +     +  
Sbjct: 89  TRSEEIARARAEVSAARAEAKNAWGRYRRLQDMESKNAVSPQDVDDGKSAAQAAQARLVA 148

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                 L  A   +E   D+ + +       ++L++ ++     T+ +P AG +V ++  
Sbjct: 149 ARKTLALALAGPRQE---DIARARGELQMAQAELSLAQRNLADTTLRAPAAG-VVRSRIL 204

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
              + A    P+  I   ++  ++R  V+  ++ +++ G  A +    + +      +  
Sbjct: 205 EPGDMAAPEIPVYTIA-LNQPLWVRTYVSETELGNLRPGMAAAIHTDTHPEQPY---QGW 260

Query: 367 IEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +  I P       S +   ++T   Y+  + + D        ELR G P  V  
Sbjct: 261 VGYISPTAEFTPKSVESPEVRTDLVYQARIYVCDA-----RGELRLGMPVTVTI 309



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 57/171 (33%), Gaps = 19/171 (11%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLN 121
           G + K  V  G ++  G  L   +       ++  +  +   +     ++    + +   
Sbjct: 37  GRVAKLIVVEGERVRSGQVLAQLQPERYQHAVEQNRGQLTVAEQTLAKLEAGTRSEEIAR 96

Query: 122 NKYDVLEKAFES-----REEQLLDFLGKYH---------STCSKVFNYGISSVYRSLKMK 167
            + +V     E+     R  +L D   K            + ++     + +  ++L + 
Sbjct: 97  ARAEVSAARAEAKNAWGRYRRLQDMESKNAVSPQDVDDGKSAAQAAQARLVAARKTLALA 156

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           L   R   + R     +  + +A LS  Q++L           V ++ + +
Sbjct: 157 LAGPRQEDIARA--RGELQMAQAELSLAQRNLADTTLRAPAAGVVRSRILE 205


>gi|224540063|ref|ZP_03680602.1| hypothetical protein BACCELL_04976 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518320|gb|EEF87425.1| hypothetical protein BACCELL_04976 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 300

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 85/247 (34%), Gaps = 33/247 (13%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         ++S+   R D+  + +  +  +S+ Q++   + NL +  A +Q  L+ 
Sbjct: 71  QLYLKKLQLEASLKSVEEQRPDILKQVAATKEQISAAQRERNRVANLLKVGAANQKQLDD 130

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E  +     +L        N  + +        ++ A                      
Sbjct: 131 AEDQLEVLRKQLVAQNSTLSNSHQSLTWQSSSVGIQVAQ--------------------- 169

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E    +  I SPI GT++  +   +        PL K V  ++  Y+RA +T +Q
Sbjct: 170 ----VEDQLRKCHITSPIIGTVLA-KYAEAGELTAMGTPLFK-VADTEQMYLRAYITSEQ 223

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV F  Y     K++  ++  I              N +    Y V + +
Sbjct: 224 LSQVKLGQKVTV-FSDYGTDEHKQYPGVVTWISDTSEFTPKTILTKNERANLVYAVKIAV 282

Query: 394 TDLAFSD 400
            +     
Sbjct: 283 HNDGLLK 289


>gi|188583771|ref|YP_001927216.1| secretion protein HlyD family protein [Methylobacterium populi
           BJ001]
 gi|179347269|gb|ACB82681.1| secretion protein HlyD family protein [Methylobacterium populi
           BJ001]
          Length = 402

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/364 (10%), Positives = 103/364 (28%), Gaps = 85/364 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG ++   V NG  + +G  +   +D               + R  +   +  L    + 
Sbjct: 101 SGYLEAVPVVNGQAVKRGDVIARLDD--------------GDYRLAVTAAQDKLATQEST 146

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              + +  E+ + Q+L        + +++      +V  S                    
Sbjct: 147 IARIGRQAEAAQAQVL-------QSAAQIDAAKADAVRASADYARATQMQAD-------- 191

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                                      V+++ ++Q +    ++   ++           +
Sbjct: 192 --------------------------YVAKSRIDQAKADRDRTEAAVKSAEAALVAARAN 225

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +  L  ++                + +   A+  +      +  +   I +P  G +V N
Sbjct: 226 VEVLRAQSR---------------EAESLAAELRTAADRARRDLDFAVIRAPFDG-VVGN 269

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++  +  Y      +  +VP      + A     Q+  V+ G    +    Y D      
Sbjct: 270 KAVEAGAYVSPGSRIAALVPLKS-VRVDANFKETQLARVRPGQEVHIHVDAYPDR---DI 325

Query: 364 KAIIEKIDPII----SQQDNNLQTQEYYEVILKIT-----DLAFSDNNIELRNGFPAEVL 414
              +E + P      S    +  T  + +++ ++          +   + LR G    V 
Sbjct: 326 VGTVESLSPASGSVFSLLPPDNATGNFTKIVQRLPVRVHVPEDVAREGL-LRPGLSVVVR 384

Query: 415 FTAK 418
              +
Sbjct: 385 VDTR 388


>gi|88608363|ref|YP_506049.1| RND family efflux transporter MFP subunit [Neorickettsia sennetsu
           str. Miyayama]
 gi|88600532|gb|ABD46000.1| efflux transporter, RND family, MFP subunit [Neorickettsia sennetsu
           str. Miyayama]
          Length = 348

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 68/214 (31%), Gaps = 16/214 (7%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +       + Q+   + +   E+ E   E    L    ++   A  E  +        L 
Sbjct: 78  EKLAGDGQILQEGDTLLRLNSEVCEAQLESLKALLEERKIEYRAAKELKDSGHSSEVKLS 137

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM-KIVPHSK 326
                     + L  LE+  E+  I +P++G ++   + +  +       L+ +++P   
Sbjct: 138 AALAGLKKAEADLKALERQMEKHAIKAPVSG-VLGKINVAVGDVVSPGATLIAELIPFGN 196

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              +R  V+   I ++++G    +  P                +  + S           
Sbjct: 197 -YIVRMNVSEADILNLREGMEVEIILP-----EIGAVNGRTRFVSLVPSGPTGT------ 244

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + V + + D  ++ N + L  G   +        
Sbjct: 245 FPVEIVVEDNEWNRNRVPL--GMVVDTRVVIGRK 276


>gi|83648809|ref|YP_437244.1| membrane-fusion protein [Hahella chejuensis KCTC 2396]
 gi|83636852|gb|ABC32819.1| Membrane-fusion protein [Hahella chejuensis KCTC 2396]
          Length = 373

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 84/220 (38%), Gaps = 23/220 (10%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNML-----RHINELYDEANLEFANYLKEISR 264
            V   +L + +  +YKS   L +++ E +  L      +++E+      E+ +  +  + 
Sbjct: 101 VVEGQELFRLDDALYKSNYTLAKSLVENRKTLLDYYSANLSEMKSLLEGEYVSQEQYKTA 160

Query: 265 DLE--QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
            L   Q+Q + A+   +L    +  +Q  + SPI+G +   +SF    Y ++ +  + I 
Sbjct: 161 FLNFTQSQSSLAEATHQLNNASQELKQTQVSSPISGVVSEVKSF-PGVYIKKGEEALVIN 219

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                   +  +  K++ +   G    +R   + +      +  I ++DP + +      
Sbjct: 220 -SIDPILFKILLPEKELGNFSLGKAVDIRLSAFTNTT---LRGTIYRVDPELDESQGAA- 274

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
                 V ++  +       + ++ G    V       T+
Sbjct: 275 -----RVYVQAPNPE-----LTVKPGMTGTVYLEQNKNTV 304



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 38/203 (18%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSI-----------------LLPIEIS 43
           M   M   LKRN   S+    +++I+G+IG +  S                    P+E+ 
Sbjct: 1   MTGRMLNILKRNFVFSV---FIVAIVGLIGYLLLSAKKHMEITNTEIARNVGNAAPVELH 57

Query: 44  VSSSGEILN---------EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
              +G + +         E   V I+    G I+   V+ G  +++G  L   +D     
Sbjct: 58  KVGAGAVTSRFAATAVATEGVSVAIRPQIEGAIRAQPVKLGDLVVEGQELFRLDDALYKS 117

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
              L K  ++N +  +D   + L  + +   +LE  + S+E+    FL    S       
Sbjct: 118 NYTLAKSLVENRKTLLDYYSANLSEMKS---LLEGEYVSQEQYKTAFLNFTQS------Q 168

Query: 155 YGISSVYRSLKMKLTRMRSIYLN 177
             ++     L      ++   ++
Sbjct: 169 SSLAEATHQLNNASQELKQTQVS 191


>gi|115351439|ref|YP_773278.1| secretion protein HlyD family protein [Burkholderia ambifaria AMMD]
 gi|115281427|gb|ABI86944.1| secretion protein HlyD family protein [Burkholderia ambifaria AMMD]
          Length = 407

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 87/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRQSDLSKAQDDLRRRVAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ +R      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVRAAQASVDAAQQQLASNRALTANTTIASHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        +  + +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 MAAAAKVRDAYLANARNVLPAPVTGYVAK-RSVQVGQRVSPGNPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSAVYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V ++I       + + +      +V   
Sbjct: 317 RLPVRIEIDPKELEKHPLRIGLSMQVDVNIK 347



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/134 (10%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQITGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L     + +  +   +  ++   +V  +      
Sbjct: 116 GLFVNDDQYRAQVALRQSDLSKAQDDLRRRVAVAQTGAVSQEEISHARDAVRAAQASVDA 175

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 176 AQQQLASNRALTAN 189


>gi|300717820|ref|YP_003742623.1| Secretion protein HlyD family protein [Erwinia billingiae Eb661]
 gi|299063656|emb|CAX60776.1| Secretion protein HlyD family protein [Erwinia billingiae Eb661]
          Length = 342

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/369 (12%), Positives = 109/369 (29%), Gaps = 82/369 (22%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   +   +    SG I+   V +   +  G  L T +D              ++ R  +
Sbjct: 41  VVTADYTLVAPKVSGYIRTVNVSDNQAVKAGALLATIDD--------------RDYRVAL 86

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +T ++ L                                 +V    ++SV   L  +   
Sbjct: 87  ETAEANL---------------------------------QVSQAKLTSVQAQLDQQQAT 113

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +          +   S   A L+   ++    + L +    + ++  +    + +++ +L
Sbjct: 114 IAQN-------DAAVSSSEATLNYAGQNAERYRRLLKSGTTTADEQQKTNASMREASAQL 166

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R++        + +  L                  ++Q +   A   + +          
Sbjct: 167 RQSQAAALASRKQVGIL---------------QASIKQAEADIAASTASVDQARLNLSYT 211

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           TI +PI G++   +S     +      L+ +VP  +   +   +  +    VK G   +V
Sbjct: 212 TIRAPIDGSV-GQRSVRQGAWVAAGTRLLAVVPLHQTYVVANFLETQLTD-VKPGQPVSV 269

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNN---- 402
                  +     +  ++ I P           +  T  Y +V+ ++      +      
Sbjct: 270 EVDALPGVT---LRGHVDSIAPATGSTFAAITADNATGNYTKVVQRLPVKIVFEPGQADV 326

Query: 403 IELRNGFPA 411
             LR G   
Sbjct: 327 ARLRVGMSV 335


>gi|299768463|ref|YP_003730489.1| cation/multidrug efflux system, mebrane-fusion component
           [Acinetobacter sp. DR1]
 gi|298698551|gb|ADI89116.1| cation/multidrug efflux system, mebrane-fusion component
           [Acinetobacter sp. DR1]
          Length = 375

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 75/222 (33%), Gaps = 25/222 (11%)

Query: 201 MMKNLFEKNA-VSQNDLNQQ------ERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           ++K L +  A +++N    Q         + ++T EL +       + R +       N+
Sbjct: 84  IIKRLVDTGASITKNQALAQLDDTPFRLSIQEATAELHQAQSTLTRLQRDLQRNRSLVNI 143

Query: 254 EFANY--LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
              +   L  +    +  Q       S+L   +      T+ SP  GTI   Q+  S   
Sbjct: 144 GAISRSDLDSLENLYQNTQAQVNAAQSRLDRAQNDLSYTTLRSPAVGTIAEVQA-ESGQV 202

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                P+ K+   +    ++  V   QI  +K     +++    +D     F   + +I 
Sbjct: 203 VSAGTPIFKLA-QNGENEVQIDVPESQINEIKIDQPVSIKLLSLSDHT---FTGHVREIA 258

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            +             Y V + I++L  +        G  A V
Sbjct: 259 TVADPNSRT------YRVRISISNLPAAAKL-----GMTATV 289



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 36/113 (31%), Gaps = 4/113 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG I+              IIK+  V+ G+ I +   L   +D      I      +   
Sbjct: 65  SGNIVPRVESQLSFRVAGRIIKR-LVDTGASITKNQALAQLDDTPFRLSIQEATAELHQA 123

Query: 107 RCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  +   +  L     L N   +     +S E    +   + ++  S++    
Sbjct: 124 QSTLTRLQRDLQRNRSLVNIGAISRSDLDSLENLYQNTQAQVNAAQSRLDRAQ 176


>gi|148996448|ref|ZP_01824166.1| fatty acid/phospholipid synthesis protein [Streptococcus pneumoniae
           SP11-BS70]
 gi|168576922|ref|ZP_02722764.1| transport protein ComB [Streptococcus pneumoniae MLV-016]
 gi|194398598|ref|YP_002036764.1| competence factor transport protein ComB [Streptococcus pneumoniae
           G54]
 gi|307066722|ref|YP_003875688.1| hypothetical protein SPAP_0092 [Streptococcus pneumoniae AP200]
 gi|147757023|gb|EDK64062.1| fatty acid/phospholipid synthesis protein [Streptococcus pneumoniae
           SP11-BS70]
 gi|183577393|gb|EDT97921.1| transport protein ComB [Streptococcus pneumoniae MLV-016]
 gi|194358265|gb|ACF56713.1| competence factor transport protein ComB [Streptococcus pneumoniae
           G54]
 gi|306408259|gb|ADM83686.1| hypothetical protein SPAP_0092 [Streptococcus pneumoniae AP200]
 gi|332201970|gb|EGJ16039.1| bacteriocin secretion accessory family protein [Streptococcus
           pneumoniae GA41317]
          Length = 449

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 48/439 (10%), Positives = 146/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L N++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLINQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV------SQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               + +  +    +L  +N         ++   +  +   ++  ++   I + ++ L  
Sbjct: 189 RDYQTAKSAMETGASLASQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 244 INELY--------------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               Y               +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|308049598|ref|YP_003913164.1| secretion protein HlyD family protein [Ferrimonas balearica DSM
           9799]
 gi|307631788|gb|ADN76090.1| secretion protein HlyD family protein [Ferrimonas balearica DSM
           9799]
          Length = 380

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 71/226 (31%), Gaps = 24/226 (10%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                   F   + S   +L+     + +        +      R  L + ++       
Sbjct: 97  LIQLEKHQFQLKVDSAKAALQQTTQSVDADTAAVAVAKANQVAARVRLDNSRQHAERNVA 156

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E   +SQ+ L+     V  +  +L +     +                     K+   
Sbjct: 157 LAENGVISQSALDDSLADVQSAEAQLAQATANLEKA-------------------KQALG 197

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            + +N       +++L          T+ +P  G I   +  +  +YA   +PL+  + +
Sbjct: 198 PIGENNPQLKSALNQLDQALLNLSYTTLYAPGDGVITNMELAT-GDYAAAGKPLLTYI-N 255

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +   ++ A V    + +VK G    +    Y       F+  ++ I
Sbjct: 256 NDSLWLTAMVREISLAYVKPGTPVKIILDSYPGR---SFEGEVQSI 298



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 69/190 (36%), Gaps = 7/190 (3%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S +R T + +     L  W   L ++     +  +     ++ +    S  I+K  V + 
Sbjct: 31  SARRFTFILL--FAALTIWLYTLWVDRLTPMTDHVRVNGQLIRLSPQVSAQIEKVLVPDN 88

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           +++ QG PL+  E  +    +D  K +++     +D + +A+              ++  
Sbjct: 89  ARVSQGEPLIQLEKHQFQLKVDSAKAALQQTTQSVDADTAAVAVAKANQVAARVRLDNSR 148

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +       + +   ++      S++  SL    +    +     +LE     L  +  ++
Sbjct: 149 Q-----HAERNVALAENGVISQSALDDSLADVQSAEAQLAQATANLEKAKQALGPIGENN 203

Query: 196 QKDLTMMKNL 205
            +  + +  L
Sbjct: 204 PQLKSALNQL 213


>gi|240140920|ref|YP_002965400.1| putative multidrug resistance secretion protein (emrA-like)
           [Methylobacterium extorquens AM1]
 gi|240010897|gb|ACS42123.1| putative multidrug resistance secretion protein (emrA-like)
           [Methylobacterium extorquens AM1]
          Length = 401

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 42/365 (11%), Positives = 102/365 (27%), Gaps = 85/365 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V NG  + +G  +   +D +    +      +      I             
Sbjct: 100 SGYLAAVPVVNGQAVKRGDVIARLDDGDYRLALKAAADKLATQESTIAR----------- 148

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              + +  E+ + Q+L    +  +  +     G +   R+  M+                
Sbjct: 149 ---VGRQAEAAQAQVLQSAAQIDAAKADAVRAG-ADYARATGMQAD-------------- 190

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                                      V+++ L+Q +    ++   ++           +
Sbjct: 191 --------------------------FVAKSRLDQAKADRDRTEAAVKSAEAALVAARAN 224

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +  L  +                 + Q   A+  +      +  +   I +P  G +V N
Sbjct: 225 VEVLKAQTR---------------EAQNLAAELRTAADRARRDLDFAVIRAPFDG-VVGN 268

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++  +  Y      +  +VP  +   + A     Q+  V+ G    +    Y D      
Sbjct: 269 KAVEAGAYVSPGSRIAALVPL-QSVRVDANFKETQLARVRPGQEVHIHVDAYPDR---DI 324

Query: 364 KAIIEKIDPII----SQQDNNLQTQEYYEVILKIT-----DLAFSDNNIELRNGFPAEVL 414
              +E + P      S    +  T  + +++ ++          +   + LR G    V 
Sbjct: 325 VGTVESLSPASGSVFSLLPPDNATGNFTKIVQRLPVRVHVPEDVAREGL-LRPGLSVVVK 383

Query: 415 FTAKN 419
              + 
Sbjct: 384 VDTRE 388


>gi|149177069|ref|ZP_01855677.1| efflux transporter, RND family, MFP subunit [Planctomyces maris DSM
           8797]
 gi|148844134|gb|EDL58489.1| efflux transporter, RND family, MFP subunit [Planctomyces maris DSM
           8797]
          Length = 453

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 48/343 (13%), Positives = 118/343 (34%), Gaps = 56/343 (16%)

Query: 39  PIEISVSSSGEILN--EDNVVE-------IKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
           P++++V+  GE+ +  E+           I  P +G +    VE    + +G  + + + 
Sbjct: 28  PVDVTVAEKGEVKSFIEERAKTSLPRVYRIAMPLNGRVLPITVEENETVSEGQIVASMDT 87

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            +    +   +  ++                                             
Sbjct: 88  SDLDAEVAKARYRVEQF-----------------------------------------AR 106

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             V          SL      ++S+ L       +    +A     + +      LF+K+
Sbjct: 107 KIVEQSDTRLEDNSLVQFDEFLKSMDLTVEAASKQQDASKAKWQYARDEFDRKYQLFKKS 166

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           A+S+++LN+ +    +S ++ +++I   +++   I        +    Y ++        
Sbjct: 167 ALSESELNEADLFNKQSEIDYQKDILTWRSLQA-IQSAMQIGKISILKYKEKKELSTAVL 225

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q    +  S+L  L + +++ T+ SPI GTI+     +    A     L++I        
Sbjct: 226 QEEQKEAQSQLDQLLRDQKRATMRSPIDGTILTRNYSNERTLA-AGDVLLEIGRLQD-LE 283

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           + A V  + + +++ G    +  P       +  +  +++I P
Sbjct: 284 VEADVLSQYVGNIQTGSLVDIEGPAIG---TQSVRGKVKRIYP 323


>gi|188492109|ref|ZP_02999379.1| multidrug resistance protein A [Escherichia coli 53638]
 gi|188487308|gb|EDU62411.1| multidrug resistance protein A [Escherichia coli 53638]
          Length = 390

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVEAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 32  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 85  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 144

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 145 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 204

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 205 EVRNAWLALERT 216


>gi|238028638|ref|YP_002912869.1| Efflux pump membrane protein [Burkholderia glumae BGR1]
 gi|237877832|gb|ACR30165.1| Efflux pump membrane protein [Burkholderia glumae BGR1]
          Length = 402

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 87/295 (29%), Gaps = 28/295 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + Q +                 + S    L   + R+R +Y        + +   
Sbjct: 73  AVNADDTQSIREGEPLVQLDPADARIALQSAEAKLAQTVRRVRGLYAADDQYRAQVAQRE 132

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + LS  Q DL     + +  AVSQ +                  I   ++ ++      D
Sbjct: 133 SDLSKAQDDLRRRLAVAQTGAVSQEE------------------ISHARDAVKAAQATLD 174

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A  + A  L   +     +       ++ +        + T+ +P+ G +   ++    
Sbjct: 175 AARQQLAANLALTANTTVSHHPDVLAAVATVRDAYLANARNTLPAPVTGYVAK-RTVQVG 233

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--------K 361
                  PLM +VP     ++ A     Q+ H++ G    +    Y              
Sbjct: 234 QRVSPGTPLMSVVPLG-QIWVDANFKEVQLDHMRIGQPVELTADIYGSSVTYHGKVAGFS 292

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                   + P  +   N ++  +   V + +       + + +     A+V   
Sbjct: 293 AGTGSAFSLLPAQNATGNWIKVVQRLPVRIALDPRELERHPLRIGLSMQADVSIK 347



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/148 (12%), Positives = 45/148 (30%), Gaps = 5/148 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +     ++   I +G PL+  +  +    +   +  +      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVNADDTQSIREGEPLVQLDPADARIALQSAEAKLAQTVRRVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              +A D    +    E      ++ L     +     ++        +  +        
Sbjct: 116 GLYAADDQYRAQVAQRESDLSKAQDDL-----RRRLAVAQTGAVSQEEISHARDAVKAAQ 170

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDL 199
            ++   R  L    +L      SH  D+
Sbjct: 171 ATLDAARQQLAANLALTANTTVSHHPDV 198


>gi|134300786|ref|YP_001114282.1| RND family efflux transporter MFP subunit [Desulfotomaculum
           reducens MI-1]
 gi|134053486|gb|ABO51457.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           reducens MI-1]
          Length = 364

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 102/266 (38%), Gaps = 39/266 (14%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELR 231
            ++++++EN  S+  ++ + HQ  +           VS+  +   +R+    +L   E +
Sbjct: 45  QVSKVNIENSLSVTGSIEAFHQAVIFAKVP---SGRVSKVAVQNGDRVAAGQSLIYLESQ 101

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLT-------- 281
              +  K     + +         ++Y +  E+ +    +Q+ F D+ + +         
Sbjct: 102 SFANTLKINQATLKKAETGLATARSDYQRFQELYQQGAVSQKEFEDKEAAVKLAEAEASS 161

Query: 282 ------ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-SQPLMKIVPHSKLTYIRAKV 334
                   E+  +  TI SPIAG +  N+S ++          LM  V      Y+   +
Sbjct: 162 AAAAVATAEEDLQNSTITSPIAGLV-ANRSVTTGQMVSPQGSSLMS-VEDLSSVYVVVNI 219

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             K +  +K G  A V    Y +   KKF  ++E ++P+  +           E  +  T
Sbjct: 220 EQKDLSMIKPGLKADVTVDAYGN---KKFTGVVEVVNPVAKK-----------EARVFET 265

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNT 420
            +   + +I L+ G  A+V      T
Sbjct: 266 KIKVDNKDILLKPGMFAKVQIKIGET 291



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 14/179 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE S+S +G I      V      SG + K  V+NG ++  G  L+  E     + + + 
Sbjct: 51  IENSLSVTGSIEAFHQAVIFAKVPSGRVSKVAVQNGDRVAAGQSLIYLESQSFANTLKIN 110

Query: 100 KVSIKNLRCHIDTEKS---ALDFLNNKYDVLEKAFESREEQL-----------LDFLGKY 145
           + ++K     + T +S       L  +  V +K FE +E  +                  
Sbjct: 111 QATLKKAETGLATARSDYQRFQELYQQGAVSQKEFEDKEAAVKLAEAEASSAAAAVATAE 170

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
               +      I+ +  +  +   +M S   + L      S +  +++  QKDL+M+K 
Sbjct: 171 EDLQNSTITSPIAGLVANRSVTTGQMVSPQGSSLMSVEDLSSVYVVVNIEQKDLSMIKP 229


>gi|170696139|ref|ZP_02887274.1| secretion protein HlyD family protein [Burkholderia graminis C4D1M]
 gi|170138954|gb|EDT07147.1| secretion protein HlyD family protein [Burkholderia graminis C4D1M]
          Length = 358

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/320 (12%), Positives = 97/320 (30%), Gaps = 10/320 (3%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L    ++E +   ++   + +L      +  ++     +   T   +          +L 
Sbjct: 31  LLATPNSESTNDAYVTADFTLLAARIPGQLSEVPVADNQQVKTGQLIARIDDRDFRAALM 90

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                + +   + ++ + + +   AL++  +  L   +   +    +    +        
Sbjct: 91  SAEADVAAAKASVVNYDAEIARHPALVAQARATLRSDEAEIQFARANAARYSNLSEAGAG 150

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFADEMSKLTILE 284
           +T E + +       L    +  ++A L       ++     ++     A   + L   +
Sbjct: 151 TTQEQQRSSSALAEQLAQ--QSRNQAVLVATEQNLDVLRAQRDKAAGALAHSEATLQQAK 208

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
                  I +P+ G I   +S     +     PL+ IVP S    + A     Q+  ++ 
Sbjct: 209 LNLSYTEIRAPVDGKI-GRRSARVGAFVTPGAPLVAIVPLSDAYVV-ANFQENQLARMRP 266

Query: 345 GYTATVRFPHYADIREKK-----FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           G    ++   +  +  +        A      PI  +      T+    V +KI+     
Sbjct: 267 GARVRIKVDSFPGVVIRGHVDSLAPATGVSFAPIAPENATGNFTKVVQRVPVKISIDPGQ 326

Query: 400 DNNIELRNGFPAEVLFTAKN 419
                L  G   E       
Sbjct: 327 QAASALSVGLSVETEVDVGK 346



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 56/173 (32%), Gaps = 13/173 (7%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFLN 121
           G + +  V +  Q+  G  +   +D +    +   +  +   +  +   D E +    L 
Sbjct: 58  GQLSEVPVADNQQVKTGQLIARIDDRDFRAALMSAEADVAAAKASVVNYDAEIARHPALV 117

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +     ++ E+ E Q        +S  S+          RS      ++     N+  L
Sbjct: 118 AQARATLRSDEA-EIQFARANAARYSNLSEAGAGTTQEQQRSSSALAEQLAQQSRNQAVL 176

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                 L  L +   K            A++ ++   Q+  +  S  E+R  +
Sbjct: 177 VATEQNLDVLRAQRDK---------AAGALAHSEATLQQAKLNLSYTEIRAPV 220


>gi|94313573|ref|YP_586782.1| HlyD family multidrug resistance protein [Cupriavidus metallidurans
           CH34]
 gi|93357425|gb|ABF11513.1| multidrug resistance protein (HlyD family), EmrA-like secretion
           [Cupriavidus metallidurans CH34]
          Length = 380

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 107/377 (28%), Gaps = 86/377 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  I +   G + +  V +  Q+  G  L   +D +                    
Sbjct: 66  VGGDVTLIAAKVPGYVAEVLVTDNQQVHAGDLLARIDDRDYRA-------------ALAK 112

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E +                                         ++S    +     R 
Sbjct: 113 AEGA-----------------------------------------VASEQALIANLDARE 131

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +       +     + + A     + D     +L EK+AVS     + +    +S    +
Sbjct: 132 KLQQAVIAEARAGVAAVDAETKRARDDQARYASLVEKSAVSIQSSQKADADYKQSVANGQ 191

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +     +  LR ++                I+   +Q Q +    +++  I         
Sbjct: 192 KAKASAEAALRQLDV---------------IATQRQQAQASLTQAIAERDIARLNLGYTE 236

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P+ GT+  N+      YA     L+ IVP  +  ++ A     Q+ H++ G  AT+ 
Sbjct: 237 LRAPVDGTV-GNRRARVGVYAPNGGQLLSIVPA-RGLWVDANFKEGQLAHMRPGMRATI- 293

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDN 401
                 +  K F   +E + P    Q         T  + +      V + + D      
Sbjct: 294 --VADVMPGKVFHGRVESLAPATGAQFSVLPPENATGNFTKIVQRVPVRIVLDDEDARLG 351

Query: 402 NIELRNGFPAEVLFTAK 418
              LR G         K
Sbjct: 352 --TLRPGLSVVAEVDTK 366


>gi|194335243|ref|YP_002017037.1| secretion protein HlyD family protein [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194307720|gb|ACF42420.1| secretion protein HlyD family protein [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 346

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 13/158 (8%)

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +       ++L   E      TI +P +G +   +S     Y    Q L+ +V  + L 
Sbjct: 194 QKAEVKKREAELRQAELQLSYTTITAPASGHVAK-KSVQPGQYVAPGQQLIALVGSNDLW 252

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
            + A     Q+  +  G   T++   Y     K+FK  +E +      Q      +  + 
Sbjct: 253 IV-ANFKETQLDKIAPGLPVTIKVDAYP---GKEFKGKVESLSSGTGAQFALLPPDNASG 308

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAK 418
            + +V     +KI      D +  L  G    V    K
Sbjct: 309 NFVKVTQRIPVKIILTEKPDKSRPLSAGMNVVVEIKVK 346


>gi|291618291|ref|YP_003521033.1| EmrA [Pantoea ananatis LMG 20103]
 gi|291153321|gb|ADD77905.1| EmrA [Pantoea ananatis LMG 20103]
          Length = 342

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 85/302 (28%), Gaps = 22/302 (7%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              DV +    +  E+L     + +    +     +      L     ++          
Sbjct: 58  AHIDVKDNQQVAAGERLATLDDRDYRVALESAEADLQVSEAKLLSSQAQLEQQQSVIAQQ 117

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +   +  +A      +       L++   V+ ++  +       +T  +R++       +
Sbjct: 118 KASVAASQATAQYAGQSAERYNRLYKSGTVAADEQQKASSAQRSATATVRQSEAALAAAI 177

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           + +  L                  +  +Q   A   + +           I++P+AG + 
Sbjct: 178 KQVGVL---------------QAAVRSSQADVAAAKANVDQARLNLSYTRIVAPVAGMV- 221

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIRE 360
             ++     +      L+ +VP  +       +  +    V+ G    ++       +  
Sbjct: 222 GQRTVRLGAWVSAGTRLLAVVPLQQTYITANYLETQLKD-VRPGQPVRIKVDALPDQVFT 280

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVLFT 416
               +I        S    +  T  Y +++ ++      D        LR G  A     
Sbjct: 281 GHVDSIAPATGATFSAISPDNATGNYTKIVQRLPVKIVLDKGQPNLAQLRVGMSAVPEIN 340

Query: 417 AK 418
            +
Sbjct: 341 TQ 342



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 58/161 (36%), Gaps = 2/161 (1%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            +    SG +    V++  Q+  G  L T +D +    ++  +  ++     + + ++ L
Sbjct: 48  IVAPKVSGYVAHIDVKDNQQVAAGERLATLDDRDYRVALESAEADLQVSEAKLLSSQAQL 107

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +   +     +KA  +  +    + G+     ++++  G  +     K    +  +    
Sbjct: 108 EQQQSVI-AQQKASVAASQATAQYAGQSAERYNRLYKSGTVAADEQQKASSAQRSATATV 166

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLN 217
           R      ++ ++ +        +   ++    A V Q  LN
Sbjct: 167 RQSEAALAAAIKQVGVLQAAVRSSQADVAAAKANVDQARLN 207


>gi|196232540|ref|ZP_03131392.1| secretion protein HlyD family protein [Chthoniobacter flavus
           Ellin428]
 gi|196223302|gb|EDY17820.1| secretion protein HlyD family protein [Chthoniobacter flavus
           Ellin428]
          Length = 358

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 80/284 (28%), Gaps = 38/284 (13%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 +     +      L      M        D + K    +A  +  + D T ++ 
Sbjct: 103 LFKLDPRDNQAKVDQAEAQLAQSNALMDYATAEIADAKAKIDQAQAQYTKAEADFTRVQE 162

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L +   VS+ + +        +   L       + M   +                    
Sbjct: 163 LTKTKVVSKQEFDSSRAAYESAKASLVSARASAEAMRSGML------------------- 203

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            + + QR  +   ++L   +      TI++P  G     ++     Y Q  Q L+ +V  
Sbjct: 204 -VAEAQRQNS--RTQLDNAKLQLSYATIVAPSTGH-TSKRTAEKGAYVQPGQTLISVVEP 259

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNN 380
               +I A     Q+  +K G TA +            F   +E   P    Q      +
Sbjct: 260 D--VWIEANFKETQLAKMKVGQTAEITVDALPGH---VFTGTVESFSPASGAQFAMLPAD 314

Query: 381 LQTQEYYE------VILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             T  + +      V + +   +       LR G    V    K
Sbjct: 315 NATGNFTKVVQRLPVKIHLDPESIRGFEDRLRPGLSTVVSVRLK 358



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 56/223 (25%), Gaps = 31/223 (13%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSIL--------LPIEISVSSSGEILNEDNVVEIKSPF 63
             P       ++ I+ +I    W++            + +            V ++    
Sbjct: 30  RTPRRNPLRMIIVILLLIAGAVWAVRYASHMLTHAETDDAYI-------TGYVHQVTPHI 82

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSA 116
            G I +   E    +  G  L   +  +    +D  +  +             I   K+ 
Sbjct: 83  GGTISEVLAEENKDVKAGDVLFKLDPRDNQAKVDQAEAQLAQSNALMDYATAEIADAKAK 142

Query: 117 LDFLNNKYDVLEKAFESREE---------QLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           +D    +Y   E  F   +E         Q  D     + +         +S        
Sbjct: 143 IDQAQAQYTKAEADFTRVQELTKTKVVSKQEFDSSRAAYESAKASLVSARASAEAMRSGM 202

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           L        +R  L+N    L              K   EK A
Sbjct: 203 LVAEAQRQNSRTQLDNAKLQLSYATIVAPSTGHTSKRTAEKGA 245


>gi|291278487|ref|YP_003495322.1| acriflavin resistance protein, AcrA/AcrE family [Deferribacter
           desulfuricans SSM1]
 gi|290753189|dbj|BAI79566.1| acriflavin resistance protein, AcrA/AcrE family [Deferribacter
           desulfuricans SSM1]
          Length = 393

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 86/274 (31%), Gaps = 43/274 (15%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                SK         + S+K     ++   L     + +    +A     +K     +N
Sbjct: 91  LIKLKSKELEDKKRFAFASVKEADNGLKQAELGIEMAKRQYEQAKAGFELAEKTYKRFQN 150

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L +  +VSQ + ++ E     +   L                   E NL  A    E   
Sbjct: 151 LLKNESVSQQEFDEVEAKYKMAKASLE----------------LAEKNLNLAKEKYE--- 191

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
              Q +      ++ L+ +        I +P  G ++  ++    N A    PL+KI   
Sbjct: 192 ---QVKIKREQALAALSEVNTYLSYTEIKAPFDGIVLEKKTD-IGNLAAPGAPLLKI--G 245

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           SK T + A V    +  +K G    V  P       K + A + +I P +     N    
Sbjct: 246 SKKTVVYAFVNEGVLNKIKVGDNVNVFIPAIN----KGYGAKVLEISPDVDPATRN---- 297

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             +++ L   D            G  A+V     
Sbjct: 298 --FKIKLTGCDAC--------VPGMYAKVQVKGD 321



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 47/135 (34%), Gaps = 2/135 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++K  V+ G    +G  L+  +  E  D       S+K     +   +  ++    +Y
Sbjct: 72  GYVEKIYVQEGETFKKGDLLIKLKSKELEDKKRFAFASVKEADNGLKQAELGIEMAKRQY 131

Query: 125 DVLEKAFESREEQLLDFLG--KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  +  FE  E+    F    K  S   + F+   +    +        +++ L +   E
Sbjct: 132 EQAKAGFELAEKTYKRFQNLLKNESVSQQEFDEVEAKYKMAKASLELAEKNLNLAKEKYE 191

Query: 183 NKSSLLRALLSSHQK 197
                    L++  +
Sbjct: 192 QVKIKREQALAALSE 206


>gi|51245397|ref|YP_065281.1| hypothetical protein DP1545 [Desulfotalea psychrophila LSv54]
 gi|50876434|emb|CAG36274.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 361

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 56/380 (14%), Positives = 115/380 (30%), Gaps = 90/380 (23%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E  V+  G I      +  +    G I++  V+ G ++ +G  L   ++           
Sbjct: 64  EEGVTVYGHIEIRTARLAFR--EQGRIREISVDEGDRVKKGQLLGQLDET---------- 111

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 R  +    +  +       V E     R +++     K  +             
Sbjct: 112 ------RLLLQLRGAEAESAAQAQAVKELESGLRPQEIAMARAKVVAG------------ 153

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
               K ++ R++ +      +  +    +  L     +L + + L E           ++
Sbjct: 154 ----KAQIHRVKLLTKRLRGIVKEGGGSKQQLDDAIAELAVSRALTE---------LARQ 200

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                      E I + +N+ +      D  N +  +                       
Sbjct: 201 AYDLAKEGPRTEKILQARNIYKGKRAQVDFINQQLRD----------------------- 237

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                      + +P AG I   +       A  + P + I+  +   ++RA +   ++ 
Sbjct: 238 ---------SQLRAPRAGIIQS-RIAEPGEMAAMNVPAL-ILSLTDEKWVRAYLPEPELG 286

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS-----QQDNNLQTQEYYEVILKITD 395
            V  G  A+V    + D     F   +  I P         Q  +L+TQ  YEV +++ D
Sbjct: 287 FVNLGMAASVFSDSFPDR---PFPGKVGFISPQAEFTPKNVQTTDLRTQLVYEVRIRLDD 343

Query: 396 LAFSDNNIELRNGFPAEVLF 415
              S + + L  G P  V  
Sbjct: 344 ---SRDQLRL--GMPVTVKI 358


>gi|170765804|ref|ZP_02900615.1| multidrug resistance protein A [Escherichia albertii TW07627]
 gi|170124950|gb|EDS93881.1| multidrug resistance protein A [Escherichia albertii TW07627]
          Length = 390

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 81/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++       + + +
Sbjct: 316 VQRLPVRVELDQKQLEQHPLRI 337



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 57/160 (35%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N ++I S  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 57  VAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTH 116

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I++++   +    K  + +   +      L           +     ++S    L +
Sbjct: 117 QLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDV 176

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
            + +  +     L   LE++ ++ +A        L + + 
Sbjct: 177 AIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERT 216


>gi|83749673|ref|ZP_00946654.1| Probable multidrug resistance protein A (emrA) MLYD family
           [Ralstonia solanacearum UW551]
 gi|207743358|ref|YP_002259750.1| multidrug resistance protein a (translocase) [Ralstonia
           solanacearum IPO1609]
 gi|83723675|gb|EAP70872.1| Probable multidrug resistance protein A (emrA) MLYD family
           [Ralstonia solanacearum UW551]
 gi|206594755|emb|CAQ61682.1| multidrug resistance protein a (translocase) [Ralstonia
           solanacearum IPO1609]
          Length = 428

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 98/295 (33%), Gaps = 28/295 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + QL+                 +     +L   + ++R++Y N     +  ++  
Sbjct: 85  AIRADDTQLVTSGQPLIELDRADARVALEQSEAALAQAVRQVRTLYSNTGAYASTLAMRE 144

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L+  ++DLT  K +    AVSQ ++   +  +  +   +     + +        L D
Sbjct: 145 SDLAKAREDLTRRKQIAGTGAVSQEEIAHAQISLQAAEAAVETAKEQLQANRV----LTD 200

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +  LE    + + +  + +    +A              + ++ + + G +   +S    
Sbjct: 201 QTTLERHPNVLQAAAKVREAYLAYA--------------RTSLPASVTGYVAK-RSVQVG 245

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--------K 361
                  PLM IVP     ++ A     Q++H++ G    +    Y              
Sbjct: 246 QRVAPGTPLMAIVPLD-QLWVDANFKEVQVRHMRVGQPVELVADVYGGSVTYHGKVVGFS 304

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                   + P  +   N ++  +   V + +      D+ + +     A+V   
Sbjct: 305 AGTGSAFSLLPAQNATGNWIKVVQRLPVRVSLDPKELKDHPLRVGLSMEAKVDIH 359



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 61/182 (33%), Gaps = 10/182 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + NVV++    +G +   + ++   +  G PL+  +  +    ++  + ++      + 
Sbjct: 68  VQGNVVQVTPQVAGTVVAIRADDTQLVTSGQPLIELDRADARVALEQSEAALAQAVRQVR 127

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           T  S      +   + E       E L     +    +   +   +   S+  +     T
Sbjct: 128 TLYSNTGAYASTLAMRESDLAKAREDLTRRKQIAGTGAVSQEEIAHAQISLQAAEAAVET 187

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
               +  NR+      LE   ++L+A     +  L   +          V++  +   +R
Sbjct: 188 AKEQLQANRVLTDQTTLERHPNVLQAAAKVREAYLAYARTSLPASVTGYVAKRSVQVGQR 247

Query: 222 IV 223
           + 
Sbjct: 248 VA 249


>gi|255535288|ref|YP_003095659.1| putative multidrug resistance protein [Flavobacteriaceae bacterium
           3519-10]
 gi|255341484|gb|ACU07597.1| putative multidrug resistance protein [Flavobacteriaceae bacterium
           3519-10]
          Length = 384

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 49/359 (13%), Positives = 106/359 (29%), Gaps = 84/359 (23%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK+ +      + +G  L+  +D              + LR  +   ++A        
Sbjct: 94  GYIKEIKYSEHEAVKKGDTLVILDD--------------RELRTQLAQAEAAW------- 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                             +   S ++  + + ++  N       
Sbjct: 133 ---------------------------------QNALASREVTSSSVNTVSNNVNVANAN 159

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +A L + ++++   KNL    AV++   +Q +     +       + ++ +     
Sbjct: 160 IAGAKARLWNAEQNMNRYKNLLASEAVTRQQYDQVKTEYDATRAAYETLLSQKNSANLAT 219

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E      +  A   +                 + L +         I +P  G ++  +
Sbjct: 220 GETRSRLGVNDAEIKR---------------TSAMLDMARINLSYAVITAPYDG-VMGRR 263

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +     Q  Q L  IV  +   +I A     Q+  VK G    +          KKF 
Sbjct: 264 LINEGQLVQPGQQLGTIV-LNGQKWITANFLESQMPRVKIGEKMNITVDALD---GKKFI 319

Query: 365 AIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             +  I           P+ +   N ++ Q+   V ++ T     ++  +LR G    V
Sbjct: 320 GTVAAISAATGSKYSNVPVDNSTGNFVKVQQRIPVRIEFTADNKKEDLAQLRAGMNVSV 378


>gi|148546923|ref|YP_001267025.1| RND family efflux transporter MFP subunit [Pseudomonas putida F1]
 gi|148510981|gb|ABQ77841.1| efflux transporter, RND family, MFP subunit [Pseudomonas putida F1]
          Length = 387

 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 70/183 (38%), Gaps = 17/183 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLP--------------IEISVSSSGEILNED 54
           +KR   A    +TL+S+  ++ +  W I+ P              IE SV++ G +    
Sbjct: 1   MKRPPLARRALITLVSLATLLAVSAWQIMPPRHDGLNTVTVSRGDIESSVTAIGTLQPRR 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ +  SG I+  +VE G  + +G  L+  +       +D  + S++NL+  +  ++
Sbjct: 61  YV-DVGAQASGQIRAIRVEVGDAVQEGQLLVEIDPSTQQAKLDAGRYSVENLQAQLQEQR 119

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +  +    K +  +        +  D          K     I  +   ++     +RS 
Sbjct: 120 AQHELARQKAERQQSLAAGGATREEDVQTARAEL--KATQARIDMIQAQIRQAQASLRSD 177

Query: 175 YLN 177
              
Sbjct: 178 QAE 180



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 90/263 (34%), Gaps = 20/263 (7%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               ++R+I +   D   +  LL  +  S Q+         +    S  +  Q +    +
Sbjct: 67  QASGQIRAIRVEVGDAVQEGQLLVEIDPSTQQAK------LDAGRYS-VENLQAQLQEQR 119

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  EL     E++  L       +E        LK     ++  Q       + L   + 
Sbjct: 120 AQHELARQKAERQQSLAAGGATREEDVQTARAELKATQARIDMIQAQIRQAQASLRSDQA 179

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVK 343
                 I +P++GT+V   +          Q  PL+  +       + A+V+   I HVK
Sbjct: 180 ELGYTRIYAPMSGTVVALDAR-EGQTLNAQQQTPLILRIAKLSPMTVWAEVSEADIGHVK 238

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPI-------ISQQDNNLQTQEYYEVILKITDL 396
            G  A   F   +    +++ + + +I P+        +Q   +  ++    V+L    L
Sbjct: 239 PGMHAY--FTTLSGG-TRRWNSTVRQILPVPPKPLEHANQGSGSPASKSNGRVVLYTVLL 295

Query: 397 AFSDNNIELRNGFPAEVLFTAKN 419
              + +  L      +V F A  
Sbjct: 296 DVDNADGALMAEMTTQVFFVADR 318


>gi|255036624|ref|YP_003087245.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
 gi|254949380|gb|ACT94080.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
          Length = 478

 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 97/281 (34%), Gaps = 29/281 (10%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           + + +    S+   +L L+ +     +L++  Q  +   K  +E+   ++  + Q E  +
Sbjct: 78  IALNVAEGDSVVKGQLLLKIRPDNYESLMARAQAAVNSSKANYEQ---TKAMVAQAEARL 134

Query: 224 YKSTL--ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            ++    E  + +   K +     E +          ++    ++           + L 
Sbjct: 135 VQAKANYERNKKLFSDKVISSADFEQFASTFGVAQQDVESAKANVAAALYNIKSAEASLR 194

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPK 337
              +   + +I +P++G +      +              +M+I   +    +R  V   
Sbjct: 195 DAAENLRKTSIFAPVSGIVSLLNVEAGERVVGTSQMAGTEMMRIANLAD-MEVRVNVNEN 253

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS-----------QQDNNLQTQEY 386
            I  V  G TA +    Y+    +KFK ++++I    +             + +      
Sbjct: 254 DIVRVSIGDTAEIDVDAYSSS-GRKFKGVVKEIANTAAGLASLSSTSTSAANTSADAVTE 312

Query: 387 YEVILKITDLAFSD-------NNIELRNGFPAEVLFTAKNT 420
           ++V +KI + +F+D        +   + G  A V    +  
Sbjct: 313 FQVKVKILNESFADLMNARSKKSYPFKPGMTASVEIITERK 353



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 88/239 (36%), Gaps = 18/239 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFED-------IETTDL 95
           VS+SG++  E  V    SP  SG I    V  G  +++G  LL                 
Sbjct: 55  VSASGKVQPEVEVKL--SPDVSGEIIALNVAEGDSVVKGQLLLKIRPDNYESLMARAQAA 112

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++  K + +  +  +   ++ L      Y+  +K F  +     DF  +  ++   V   
Sbjct: 113 VNSSKANYEQTKAMVAQAEARLVQAKANYERNKKLFSDKVISSADF--EQFASTFGVAQQ 170

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            + S   ++   L  ++S   +  D         ++ +     ++++     +  V  + 
Sbjct: 171 DVESAKANVAAALYNIKSAEASLRDAAENLRK-TSIFAPVSGIVSLLNVEAGERVVGTSQ 229

Query: 216 LNQQE--RIVYKSTLELRENIHE---QKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +   E  RI   + +E+R N++E    +  +    E+  +A        K + +++   
Sbjct: 230 MAGTEMMRIANLADMEVRVNVNENDIVRVSIGDTAEIDVDAYSSSGRKFKGVVKEIANT 288


>gi|254673873|emb|CBA09656.1| colicin V secretion protein [Neisseria meningitidis alpha275]
          Length = 269

 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 52/287 (18%), Positives = 99/287 (34%), Gaps = 41/287 (14%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S   +T  + +  + +I + I        +  G++L    VV + S   G I    
Sbjct: 24  TRPFSFLFLTFCAFLIALCIIIFLIFGSYTNKTTVEGQLLPTMGVVRVYSSDIGTITHKF 83

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VENG+ +  G PL         +          N++  +  E +    L           
Sbjct: 84  VENGNFVKAGEPLFKLSTSRFGEK--------GNVQAKLAAEANLKKTLA---------- 125

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                Q L+ L + H    K  +  I  +   L+              +++ + +     
Sbjct: 126 ----LQELERLKRIHQNEQKNVHNNIHRLNNQLE--------------NIKQQITGQNRQ 167

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   +K L   K L  + AVSQ D    E  + +    L     EQ N +R +    DE 
Sbjct: 168 IRLVEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKREQNNAIREL----DEQ 223

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +  ++  +    +L Q  R   +   ++      + ++TI +  +G
Sbjct: 224 KITLSSLPERHKTELSQLNRAITEMNQEILDF-DLKSEQTIRASKSG 269


>gi|295083898|emb|CBK65421.1| hypothetical protein [Bacteroides xylanisolvens XB1A]
          Length = 295

 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 91/256 (35%), Gaps = 39/256 (15%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         M+S+   R DL  + +  +  + + +++   ++NL    A +Q  L+ 
Sbjct: 64  QLYLKKLQLEASMKSVENQRPDLAKQIAATKQQIVTAERERKRVENLLAAGAANQKQLDD 123

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  V     +L       +N    + E  +   ++ A                      
Sbjct: 124 WDAQVKLLERQLVAQESSLRNSTNSLTEQGNSVAIQVAQ--------------------- 162

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E    +  + SPIAGT++   + +    A   +PL K V      Y+RA +T +Q
Sbjct: 163 ----VEDQLAKCHVQSPIAGTVLAKYAET-GELAAIGKPLFK-VGEVDRMYLRAYITSEQ 216

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV +  Y +  +K +   +  I              N +    Y V + +
Sbjct: 217 LSQVKLGDQVTV-YADYGNSEQKAYPGEVTWISDRSEFTPKTILTKNERANLVYAVKIAV 275

Query: 394 TDLAFSDNNIELRNGF 409
                  N+  L+ G 
Sbjct: 276 ------KNDGALKIGM 285


>gi|67923701|ref|ZP_00517168.1| hypothetical protein CwatDRAFT_2905 [Crocosphaera watsonii WH 8501]
 gi|67854456|gb|EAM49748.1| hypothetical protein CwatDRAFT_2905 [Crocosphaera watsonii WH 8501]
          Length = 438

 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 43/352 (12%), Positives = 110/352 (31%), Gaps = 25/352 (7%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           +  I  SV     ++   +++  +     G I + +++ G  +  G  +   +  +  + 
Sbjct: 1   MGRIPTSVIGQSILIRPRSIISFQPRGTGGQILEIRIKPGDLVKVGQVIAVLDFPDLQEQ 60

Query: 96  IDLKKVSIKNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           +  ++  +       +    +     N +   L+    S  +Q+   + +  +  +K+  
Sbjct: 61  LRNQQEELAEYEAENLAITNAQTIRSNLQQQTLQLESVSLPQQVAANVKEIEANQTKLIA 120

Query: 155 YGISS-VYRSLKMKLTRMRSIYLNRLD------LENKSSLLRALLSSHQKDLTMMKNLFE 207
               S  Y+    +L     +   R         E   + L   + + +  L   +N   
Sbjct: 121 VKKQSKAYQERIAQLDDFIDLTQRRFQAYTDLVAEGAVAPLSFQIVNSENQLQQSQNERT 180

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                  +L+  E  +  + + L       +  L  +        L       +    ++
Sbjct: 181 NLYAQLENLSSVEEELASANINLNAQNENLRAQLEKLRTDSANLRLTDLQANVQRQNTID 240

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-VPHSK 326
             +R   +  +K+       +   ++S   GT+V     +   Y Q    L  + V +S+
Sbjct: 241 NLKRDIDNLKAKIA------KDSLVISAYNGTVVTVSGNA-GEYIQVGTALGTLRVNNSE 293

Query: 327 LTYIR--------AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                        A  TP+    +++G    V      + R    +     I
Sbjct: 294 TVDNENKPMTTAYAFFTPEDANRIRQGMVGKVTPHLLTNRRFGGLREEYGAI 345


>gi|134094811|ref|YP_001099886.1| cobalt-zinc-cadmium resistance protein CzcB [Herminiimonas
           arsenicoxydans]
 gi|133738714|emb|CAL61759.1| Cobalt-zinc-cadmium resistance protein CzcB (Cation efflux system
           protein CzcB) [Herminiimonas arsenicoxydans]
          Length = 524

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 94/286 (32%), Gaps = 25/286 (8%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
              G+   T  ++   G+  +        T ++ I   RL+ ++   ++  L    +   
Sbjct: 181 QEEGRVSMTDEQLKLNGVQIMTAGPARIKTSLQLIGEIRLNEDSTVHVVPRLAGIVESVR 240

Query: 200 TMMKNLFEKN----AVSQNDLNQQ--ERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               +  +K      +S   L+ Q  E +  +  L L    +E++  L       ++  L
Sbjct: 241 ANAGDQVKKGQVLAVISSQSLSDQRSELLAAQKRLSLARTTYEREKTLWEEKISAEQDYL 300

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +    ++E     +  Q+  A   +  +       Q  I SPI G I   +  +    A+
Sbjct: 301 QARAVMQEAQIMAQSAQQKLAALGA--SSSSSNLTQYEIRSPINGVITDKRIST-GTVAK 357

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           +   +  I       ++   V  + I  +K G   TV+   +           +  I  +
Sbjct: 358 EDDNIFVIS-DLSTVWVDLTVRAEDIGALKTGQKGTVKSNAFDAQDV----GTVSYIGAL 412

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + +Q          +  + +     +   I  R G P  V   A  
Sbjct: 413 VGEQTRTA------KARIVLA----NPKGIW-RPGLPVNVNLVAGE 447



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 34/85 (40%), Gaps = 4/85 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDF-L 120
           GI++  +   G Q+ +G  L        +D       + K L   R   + EK+  +  +
Sbjct: 234 GIVESVRANAGDQVKKGQVLAVISSQSLSDQRSELLAAQKRLSLARTTYEREKTLWEEKI 293

Query: 121 NNKYDVLEKAFESREEQLLDFLGKY 145
           + + D L+     +E Q++    + 
Sbjct: 294 SAEQDYLQARAVMQEAQIMAQSAQQ 318


>gi|71736908|ref|YP_274164.1| RND family efflux transporter MFP subunit [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557461|gb|AAZ36672.1| efflux transporter, RND family, MFP subunit [Pseudomonas syringae
           pv. phaseolicola 1448A]
          Length = 390

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 72/182 (39%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+ P     +  L +  +I +  W I+                IE SV++ G +    
Sbjct: 1   MKRSRPPRRALLVALCLFPVIAVCAWQIMPDSKGHAATVTVTRSNIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  +G I K   + G Q+ +G  L+  +       +D  + +I+NL+  +  ++
Sbjct: 61  YV-DVGSQATGQIMKIHAQVGDQVKEGDLLVEIDPSTQKARLDAARYAIENLKAQLQEQR 119

Query: 115 SALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    K      L     +R E +     ++ +T ++V  F   I     +L+    
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEAQAALRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 AL 181



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 72/223 (32%), Gaps = 12/223 (5%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIYAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWSSTVRQILPVPPRPLDQANQGGGSPSSARKSGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            V+L    L   +++  L     A++ F A   +    +  P+
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTAQIFFVAG--SAQNTLTAPL 330


>gi|225020445|ref|ZP_03709637.1| hypothetical protein CORMATOL_00452 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946834|gb|EEG28043.1| hypothetical protein CORMATOL_00452 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 626

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 62/458 (13%), Positives = 122/458 (26%), Gaps = 104/458 (22%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSG------------EILNEDNVVEIKSPF-----SG 65
           + II +IG+  +S          +S              +    NV   KS       +G
Sbjct: 19  VVIITLIGVAMYSFFANSSAITLASSDVQVLDKRDNSQRVAVSGNVEPQKSMVLSTRLTG 78

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + +  V+ G ++     +   +  +    +   K        +   E    +   N+Y 
Sbjct: 79  PVNQLNVKVGDRVQADQLVANLDVTDKETELAKSKAQAATNEANSIAEIKGAESRYNRYK 138

Query: 126 VL-----------EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS----------- 163
            L            KA     E   D   +     S +   G      +           
Sbjct: 139 ELLDNGMNQDINNAKAALRTAESAYDEANRNFQLESALRGNGKQQDIAAQQSKIENARQD 198

Query: 164 ------------------LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                             L+ + T  RS+   + +L    + L       Q  +      
Sbjct: 199 SMNTNVEAARMGLKAVGTLQDQDTERRSLATEQSNLAELKAQLDGASPEQQVQIQAQIKA 258

Query: 206 FEKNAVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------- 257
            E+   + QN +N+Q R    S L+  +  ++ +   R++ E  D      A        
Sbjct: 259 SEERVETLQNSVNKQYRNTIDSGLDAADVTNKLQAADRNLRESQDSYEATLAQADNKLVT 318

Query: 258 ----------YLKEISRDLEQNQRTFADEMSKLTILEKTREQ------------------ 289
                       K+ +  L   +R    +M           +                  
Sbjct: 319 DQRNVAKTFEEKKDAATALAVAERNAQFQMEDNQAAIDNAVRNARAAQASNNAGDNQLKL 378

Query: 290 ----KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 I +P  G +    +    + A  +  LM I        + A V    +  +  G
Sbjct: 379 DIASAQIRAPFDGVVTNVAA-KQGSAANGA--LMTIA-DDARMIVHANVKEIDVAKIAVG 434

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 F       +KKF+  +  +  + + Q+     
Sbjct: 435 QRVE--FTT-PGTGDKKFQGKVSFVSTVAAPQETPATP 469


>gi|94971047|ref|YP_593095.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
 gi|94553097|gb|ABF43021.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
          Length = 345

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 45/333 (13%), Positives = 98/333 (29%), Gaps = 79/333 (23%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  V+ +G +  E   +++ +  SG +K   VE G ++ QG  L   E+ +    +   +
Sbjct: 41  DWIVAGAGRVEPESEDIKLGAELSGKLKSVYVEEGDRVKQGQLLAELENADYHAQVASAQ 100

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +      +                                        KV N      
Sbjct: 101 AEVHETEAQL---------------------------------------RKVVNGARREE 121

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            R     + + R++  N                  + ++   + L+E   +S+ +  Q  
Sbjct: 122 RREALSTVEQARAVMNN-----------------SESEMLRRQKLYEAGVISREEAEQYA 164

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +    +  + +E                 E +       +E  RD+           ++L
Sbjct: 165 KEYDVAKAKFQE---------------VSEHHKLVDETAREEDRDIATA--NLLAARARL 207

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS----QPLMKIVPHSKLTYIRAKVTP 336
              +    +  + SPI GT++  +                P++ I   ++   +R  V  
Sbjct: 208 EQAQAMLAKTFVRSPIEGTVLR-KHHRLGESVSNGSTVPDPIVTIG-ATERLRVRVDVDE 265

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
             +  +  G  A V    Y D R +     I +
Sbjct: 266 ADVSKLTVGQKAYVTADAYGDKRFRGHIVRIGQ 298


>gi|309795144|ref|ZP_07689563.1| efflux pump membrane protein [Escherichia coli MS 145-7]
 gi|308121115|gb|EFO58377.1| efflux pump membrane protein [Escherichia coli MS 145-7]
          Length = 390

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 81/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P+ +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPVQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 32  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 85  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 144

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 145 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 204

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 205 EVRNAWLALERT 216


>gi|326800804|ref|YP_004318623.1| efflux transporter RND family, MFP subunit [Sphingobacterium sp.
           21]
 gi|326551568|gb|ADZ79953.1| efflux transporter, RND family, MFP subunit [Sphingobacterium sp.
           21]
          Length = 390

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 71/206 (34%), Gaps = 29/206 (14%)

Query: 230 LRENIHEQKNMLRHINEL--YDEANLEFANYLKEISR-----------DLEQNQRTFADE 276
           ++  + + K  L        Y + N      L ++               E  Q +    
Sbjct: 95  MQATVDQIKGQLAQAQSNFNYQQINFNRQQELFQVGAISKATYDLATNSYETAQASVNSI 154

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAK 333
            ++L   ++      I SPI G ++ N+S S       S     L  +        ++AK
Sbjct: 155 KAQLRSAQQNLSFTKIYSPIDGVVL-NRSVSVGQTVAASFNTPTLFSLAKDITKMQVQAK 213

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    I  V+ G   T     Y D     F+  + +I  +     NN+ T   Y  I++ 
Sbjct: 214 VDEADIGDVQMGDRVTFTVDAYIDQT---FEGKVSEI-RLQPSTSNNVVT---YTTIIET 266

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN 419
           +     + +++L+ G  A V    K 
Sbjct: 267 S-----NADMKLKPGMTATVTIYTKE 287



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 50/141 (35%), Gaps = 1/141 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PI   ++S+G I   D V  + +  SGII     +  +Q+ +G  L   +       +D
Sbjct: 42  GPIASIITSTGTIQPVDTV-AVGTQVSGIIASIYTDYNAQVKKGQLLAELDPTLMQATVD 100

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K  +   + + + ++   +     + V   +  + +     +     S  S       
Sbjct: 101 QIKGQLAQAQSNFNYQQINFNRQQELFQVGAISKATYDLATNSYETAQASVNSIKAQLRS 160

Query: 158 SSVYRSLKMKLTRMRSIYLNR 178
           +    S     + +  + LNR
Sbjct: 161 AQQNLSFTKIYSPIDGVVLNR 181


>gi|78356387|ref|YP_387836.1| secretion protein HlyD [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218792|gb|ABB38141.1| Secretion protein HlyD [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 424

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 50/376 (13%), Positives = 108/376 (28%), Gaps = 90/376 (23%)

Query: 40  IEISVSSSGEILNE-DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           I   + ++G I  E   +V+  +  +G+I+K  V  G  + +G  +   +D E    ++ 
Sbjct: 54  IREVLEATGIIKPEVGAIVKTGTRATGLIRKMYVRVGDSVQKGDLIAEIDDREQQASLNE 113

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
              +++  +  +                         +  L +  +     +++      
Sbjct: 114 ASANVEKSKAEL------------------------RQIELSYPLRIDEAAAQLKAAKAE 149

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
             +  L   L R + +    L+ +NK    +   +                 VS N +  
Sbjct: 150 LRFAELT--LQRTQQLVTQHLETQNKLDDTQQAAT-----------------VSSNTVRA 190

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           +E  + +   E      + +  L+      + A +                         
Sbjct: 191 REATLRRLRAEFELERTKAREALQQAQAGLESARIR------------------------ 226

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPHSKLTYIRAKVTP 336
                       TI SPI G +    +            +  +  V       +   V  
Sbjct: 227 --------MSYTTIYSPINGIVSQVTA-QEGETVVAGLEVANLITVLDPDRLEMWIYVDE 277

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             +  V+ G T   R   Y D     F   +++I P    Q        YY+ ++K+   
Sbjct: 278 TDVGKVRPGMTTEFRVDTYPDA---VFTGTVDQIYP----QPEVRDNIVYYQALVKLAPE 330

Query: 397 AFSDNNIELRNGFPAE 412
                  +LR     +
Sbjct: 331 TSR----KLRPEMTTQ 342


>gi|78048209|ref|YP_364384.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78036639|emb|CAJ24330.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 400

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 91/322 (28%), Gaps = 28/322 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L+         +     K  V +       + LL    + +    +     I++    + 
Sbjct: 77  LQADSVAVAPRVSGYVTKVLVSDNQIVEAGQPLLQIDDRTYQATLQQAEAAIAARQADIV 136

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                + +     L    + +   A L   Q ++     L    A +       +  + +
Sbjct: 137 AATANVSAQESALLQARTQVTAAAASLKFAQAEVKRFAPLAASGADTHEHQESLQHDLAR 196

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  +      + K     I                     LEQ Q       +       
Sbjct: 197 ARAQYDAAQAQAKAGESQIQAS---------------RAQLEQAQAGVKQATADADQARV 241

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             E   + S I G +  +++     +       M IVP   L  + A     Q+  ++ G
Sbjct: 242 AVEDTRLTSRIHGRV-GDKTVQVGQFLGAGTRTMTIVPQQSLYLV-ANFKETQVGLMRPG 299

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLA 397
             A +     + ++       +E + P    Q         T  + +V+    ++I  LA
Sbjct: 300 QPAEIEVDALSGVK---LHGKVESLSPGTGSQFALLPPENATGNFTKVVQRVPVRIRVLA 356

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             +    L  G   EV    ++
Sbjct: 357 GEEARKVLVPGMSVEVTVDTRS 378


>gi|149199947|ref|ZP_01876974.1| hypothetical protein LNTAR_21920 [Lentisphaera araneosa HTCC2155]
 gi|149136922|gb|EDM25348.1| hypothetical protein LNTAR_21920 [Lentisphaera araneosa HTCC2155]
          Length = 852

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 68/430 (15%), Positives = 141/430 (32%), Gaps = 66/430 (15%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI---IKKFQVENGSQ 77
           T L +I +    T++    ++    +   +  E      +S  SG    +  F + +G+ 
Sbjct: 5   TTLILISL-CFSTFAEQAKLQPYTPAV-SLRVESQAKSAQSFKSGRSTSVIDFILPDGAA 62

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  ++ F         D K   +        T K+ +  +NN    L+   +  +E 
Sbjct: 63  VKEGDVVIRFNSERVRHRYDQK---VNAKNSSEITYKNKIFDINNNIKDLKNELKDHKEA 119

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +L       +  +                 L +  ++ L++ +L        A     ++
Sbjct: 120 ILTQEVTLDTVLN-----------------LPKQETVKLSKSNLRVSEVDYEA----AKE 158

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-----NIHEQKNMLRHINELYDEAN 252
           ++   K  +EK  +S  +  + E         L +      I E+K   R + +   +  
Sbjct: 159 EMEKAKVRYEKGYISSVEYAEIELNYNIKKNSLNQKQELLQISERKADPRDVKKQELKLE 218

Query: 253 ---LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-------SPIAGTIVY 302
              L+ A  LK ++   +        +   L  L+   E+ +         + I G + Y
Sbjct: 219 NNKLQHAFSLKSLADSTKIADSKIKKQEKYLEKLDDDIERYSERLEKLSHKAEIDGYVKY 278

Query: 303 NQSFSS---SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
               S     +     Q +  I P    TY  A +   +I+H K G   T++        
Sbjct: 279 ANISSPIEAGSIIYWGQSVASI-PDLSSTYFTAYLPETKIKHFKVGGKGTIQVSG---RL 334

Query: 360 EKKFKAIIEKIDPIISQ----------QDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           + + K  I KI                +       ++Y + LK  +L        LR G 
Sbjct: 335 DTQLKVRISKISATPEDIAYQTKISWGKTAKTTGVKFYLLTLKPEELPSW-----LRPGM 389

Query: 410 PAEVLFTAKN 419
              +  + + 
Sbjct: 390 TGMLDLSTEE 399



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 120/368 (32%), Gaps = 45/368 (12%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDV 126
            +   S++ QG  L   +  E  + I   +  + +L   ++  K+ L    D        
Sbjct: 500 LIPEESRVEQGEILAKLDATELDETILKAETKLADLEEALENAKTKLEKTQDEFAFDKKR 559

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L+ + ES        +    S       Y   S+   L  K      +      L + S 
Sbjct: 560 LKNSLESARFSKDIVVNPLLSATLVNKRYTWKSLKIQLDHKQFLYNRLKAKPSHLVSSSE 619

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           + +A L+  +  L + K        ++ DL+++E+            I + +       +
Sbjct: 620 MAKAKLAYEEAVLKLEK--------AKIDLDEEEK------GATSAEIAKAEIDFELAKD 665

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             D         ++E    L+  +    +  + L  L++  E  TI +P  GT+ Y + +
Sbjct: 666 NIDRVIQRMPIDIEEDKNTLKSAEIALDNHKTYLIKLKQEYESLTIKAPTKGTVHYKKLW 725

Query: 307 SSSNY--------AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            S+           +    ++ + P +    ++ KV  K    +K+     +        
Sbjct: 726 GSNGVTKVDIGTEVRSWNRILSL-PETDTMTVKVKVLEKFHPMIKENVEVNITIASIEGR 784

Query: 359 REKKFKA-----------IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             K               I +  DP  S ++   +    YE+ L         N   ++ 
Sbjct: 785 VFKGTLGKPGFNFEPDNEIEQSTDPYSS-REPTGKVFSIYEIKLPP------LNKYHIKP 837

Query: 408 GFPAEVLF 415
           G  A+V  
Sbjct: 838 GSVAKVEI 845


>gi|114778193|ref|ZP_01453065.1| Secretion protein HlyD [Mariprofundus ferrooxydans PV-1]
 gi|114551440|gb|EAU53995.1| Secretion protein HlyD [Mariprofundus ferrooxydans PV-1]
          Length = 342

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 71/198 (35%), Gaps = 26/198 (13%)

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
             ++  + + ++ +  + ++    L  E  +    Y K         +  +    S++  
Sbjct: 99  ARQAYAQAKADLADAASDMKRYRSLLAEHAVSQQQYDK--------VRLRYVVAQSRVVQ 150

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            E   +   + SP+ G +V   + SS + A   QPL+ ++       +   V+ + +  +
Sbjct: 151 AENQLQYAEVRSPVNGIVVEKHA-SSGDLATPGQPLL-VLEDPSSLLVETYVSEQFVATI 208

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
            +     +  P  A   +   + I++  D +  Q          + V + ++  + +   
Sbjct: 209 HENDAVRIFIPGLAKTIDGHIRQIVKSADRLSHQ----------FLVKVALSAESGA--- 255

Query: 403 IELRNGFPAEVLFTAKNT 420
                G  AEV F+    
Sbjct: 256 ---YPGMFAEVNFSVGER 270



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 46/146 (31%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           ++ D+ V I S  SG I+  ++  G ++  G  L   + +         K  + +    +
Sbjct: 58  VSSDHKVSISSRLSGYIRSIKLREGDRVKSGQLLFDVDPVNARQAYAQAKADLADAASDM 117

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              +S L          +K            +   +          ++ +          
Sbjct: 118 KRYRSLLAEHAVSQQQYDKVRLRYVVAQSRVVQAENQLQYAEVRSPVNGIVVEKHASSGD 177

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQ 196
           + +     L LE+ SSLL     S Q
Sbjct: 178 LATPGQPLLVLEDPSSLLVETYVSEQ 203


>gi|148828078|ref|YP_001292831.1| multidrug resistance protein A [Haemophilus influenzae PittGG]
 gi|148719320|gb|ABR00448.1| multidrug resistance protein A [Haemophilus influenzae PittGG]
          Length = 390

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 95/292 (32%), Gaps = 37/292 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +   T +K+      S   +L   + ++  +      L++        L+  Q +L
Sbjct: 87  DILVELDDTNAKLSFEQAKS---NLANAVRQIEQLGFTVQQLQSAVHANEISLAQAQGNL 143

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L +  A+ +      +  V  +   L  + ++       +  +      +  N  
Sbjct: 144 ARRVQLEKMGAIDKESFQHAKEAVELAKANLNASKNQLAANQALLRNVPLREQPQIQNA- 202

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                            MS L       ++  I SPI G +                 LM
Sbjct: 203 -----------------MSSLKQAWLNLQRTKIRSPIDGYVARRNV-QVGQAVSVGGALM 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +V  ++  ++ A     Q+ +++ G    + F  Y   + K+F  +I  I+        
Sbjct: 245 AVV-SNEQMWLEANFKETQLTNMRIGQPVKIHFDLYG--KNKEFDGVINGIEMGTGNAFS 301

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             P  +   N ++  +   V +K+    F++  + +  G  A       +++
Sbjct: 302 LLPSQNATGNWIKVVQRVPVRIKLDPQQFTETPLRI--GLSATAKVRISDSS 351



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 59/175 (33%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V + S  +G + K   +N  ++  G  L+  +D       +  K ++ N    I+
Sbjct: 57  VGGNQVMVSSQVAGNVAKINADNMDKVHAGDILVELDDTNAKLSFEQAKSNLANAVRQIE 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                +  L +     E +    +  L     L K  +   + F +   +V  +      
Sbjct: 117 QLGFTVQQLQSAVHANEISLAQAQGNLARRVQLEKMGAIDKESFQHAKEAVELAKANLNA 176

Query: 170 RMRSIYLNRLDLEN-----KSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
               +  N+  L N     +  +  A+ S  Q  L + +          V++ ++
Sbjct: 177 SKNQLAANQALLRNVPLREQPQIQNAMSSLKQAWLNLQRTKIRSPIDGYVARRNV 231


>gi|322435269|ref|YP_004217481.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX9]
 gi|321162996|gb|ADW68701.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX9]
          Length = 415

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 48/343 (13%), Positives = 94/343 (27%), Gaps = 86/343 (25%)

Query: 20  MTLLSIIGIIGL--------ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             +L I GI  L        +T + L P+  +V ++G++          +P  G+I+K  
Sbjct: 21  GAILIIFGIRALTREKIPVRVTTASLQPLISTVPTTGKVEPIHEYQAH-APGPGVIQKIY 79

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE    I  GT L+   D               +    + + +S L              
Sbjct: 80  VEVNQHIKAGTLLMRMND--------------ADAIARLASAQSTLSG------------ 113

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                                           L  ++         R       +  +  
Sbjct: 114 ------------------------------AQLNQQVIGSGGTLEERTHFNQDIAAAQTE 143

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
             + Q DL   + L ++ A S  ++ + ++ +  +   L        +     ++    A
Sbjct: 144 QRNAQNDLATEQKLQQQGAASAGEVLRAQQRLQTANTALANAQSHTASRFDSGDQRGAAA 203

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                                  D  + LT  +       I SPI GT+      +    
Sbjct: 204 R--------------------LNDAKNNLTAAQAGVAAVDIRSPIDGTVYSIPFSAYDFV 243

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
              +  L+  V       +RA      I  + +G    + +  
Sbjct: 244 PSGADDLLD-VADLTKLQVRAYFDEPVIGQLAQGQPVKIVWDA 285


>gi|290476219|ref|YP_003469119.1| multidrug resistance secretion protein [Xenorhabdus bovienii
           SS-2004]
 gi|289175552|emb|CBJ82355.1| multidrug resistance secretion protein [Xenorhabdus bovienii
           SS-2004]
          Length = 392

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 78/272 (28%), Gaps = 30/272 (11%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +      L + +       L+    +   +L +  LS  Q DL   + L  K  + + +L
Sbjct: 102 LKKAENELAIAVRTTHQRILDNQQYQAVINLKKIALSKAQNDLNRREILGIKEVIGKEEL 161

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
                 V  +  +L   I +  +    I +   +           +              
Sbjct: 162 QHTRESVAIAKADLDVAIAQYNSNQATILDTPLDKQPAVEKAASGVRDAWL--------- 212

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                      ++  I+SP+ G +         +      PLM IVP S   +I A    
Sbjct: 213 ---------ALQRTKIVSPVDGYVSRRHV-QVGSRINSGTPLMVIVPASN-MWIEANFKE 261

Query: 337 KQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----EYYE 388
            Q+  ++ G    +    Y D  +   K   + +            N         +   
Sbjct: 262 TQLATMRIGQPVKIISDFYNDGVVYTGKVAGLDMGTGSAFSLLPAQNASGNWIKVVQRLP 321

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           V +++         + +  G   +V     +T
Sbjct: 322 VRIELDPEQLKQYPLRI--GLSTKVTVDTADT 351


>gi|253700645|ref|YP_003021834.1| efflux transporter RND family, MFP subunit [Geobacter sp. M21]
 gi|251775495|gb|ACT18076.1| efflux transporter, RND family, MFP subunit [Geobacter sp. M21]
          Length = 419

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 72/258 (27%), Gaps = 56/258 (21%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           L+ ++    N L+ E   +  R  L+  ++     K L  +  ++Q+DL+  +     + 
Sbjct: 92  LSAVQQSRGNALNAEASLAKARVTLADAKRTYNRNKALLAEGIIAQSDLDAAQTAYDSAV 151

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             +R                                      +         L   E   
Sbjct: 152 AGVRG------------------------------------AEAVLLQTRGALRQAETNL 175

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
              TI SP+ G +V             S     L  I        I   +    I  +K 
Sbjct: 176 NYSTIKSPVDGIVVSRNVD-VGQTVAASFQTPTLFTIAQDLTKMQIDTSIDESDISRLKV 234

Query: 345 GYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           G  A      Y +     F+  + +I   P+++Q          Y  ++ +      +  
Sbjct: 235 GQKAEFTVDAYPEQT---FEGAVVQIRNAPVVTQNVVT------YVAVIGVD-----NRQ 280

Query: 403 IELRNGFPAEVLFTAKNT 420
           + L+ G  A V       
Sbjct: 281 LLLKPGMTANVAVQTMRK 298



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++G +     V    +  SG I K  V+  SQ+ +G P+   +       +   
Sbjct: 40  ITSTVSATGTLNAVVTVQV-GTQVSGTIAKLYVDFNSQVKKGQPIAQIDPALFLSAVQQS 98

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + +  N    +   +  L      Y+  +           D      +  S V   G+  
Sbjct: 99  RGNALNAEASLAKARVTLADAKRTYNRNKALLAEGIIAQSDLDAAQTAYDSAV--AGVRG 156

Query: 160 VYRSLKMKLTRMRSIYLN 177
               L      +R    N
Sbjct: 157 AEAVLLQTRGALRQAETN 174


>gi|193212471|ref|YP_001998424.1| RND family efflux transporter MFP subunit [Chlorobaculum parvum
           NCIB 8327]
 gi|193085948|gb|ACF11224.1| efflux transporter, RND family, MFP subunit [Chlorobaculum parvum
           NCIB 8327]
          Length = 422

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 78/225 (34%), Gaps = 20/225 (8%)

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + ++  + N      L  Q R++       + +I  +  ++   + L  + N E +   
Sbjct: 104 QVKQSRAQLNLAKAQSLEAQARMLKAEDDFRKADILYKDKLISQTDWLSAKTNAETSQ-- 161

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QS 315
                  +  + +     S L   E+   +  + SPI GTI+   S S            
Sbjct: 162 ----AAWKAARYSIDQNQSLLDQNEERLTKTVVRSPINGTIISLSSKSGERVVGTGQFPG 217

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             ++KI        ++ +V    I +V+ G   T+    + +     FK  + +I     
Sbjct: 218 TEVLKIA-DLDNMLLKVEVNENDIVNVQVGNPVTITVDAFGERT---FKGEVSEIANSAK 273

Query: 376 QQDNNLQTQ-EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            Q  N Q +   +EV +KI      ++   L+ G         + 
Sbjct: 274 TQAANTQEEVTNFEVKIKI-----LNHQRLLKPGMSGTADIETQR 313



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 58/187 (31%), Gaps = 22/187 (11%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITW--------------SILLPIEISVSSSGEI 50
           M K  +     ++  + +  ++   GLI W              +    +   V+++G+I
Sbjct: 1   MTKKQRSGKFRTIIIIAVTLLVAGGGLIFWLNTREKPIEVTTEKAFRKEVVHLVTATGKI 60

Query: 51  LNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI-----K 104
             E  V    SP  SG I +  +  G ++  G  L   +     + +   +  +     +
Sbjct: 61  EPE--VEVAMSPDVSGEIIELPIVEGQEVKTGDLLFRIQPDIYVNQVKQSRAQLNLAKAQ 118

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           +L       K+  DF        +K     +        +      K   Y I      L
Sbjct: 119 SLEAQARMLKAEDDFRKADILYKDKLISQTDWLSAKTNAETSQAAWKAARYSIDQNQSLL 178

Query: 165 KMKLTRM 171
                R+
Sbjct: 179 DQNEERL 185


>gi|145636971|ref|ZP_01792635.1| multidrug resistance protein A [Haemophilus influenzae PittHH]
 gi|145269829|gb|EDK09768.1| multidrug resistance protein A [Haemophilus influenzae PittHH]
          Length = 390

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 96/292 (32%), Gaps = 37/292 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +   T +K+      S   +L   + ++  +      L++        L+  Q +L
Sbjct: 87  DILVELDDTNAKLSFEQAKS---NLANAVRQVEQLGFTVQQLQSAVHANEISLAQAQGNL 143

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L +  A+ +      +  V  +   L  + ++       ++ +      +  N  
Sbjct: 144 ARRVQLEKMGAIDKESFQHAKEAVELAKANLNASKNQLAANQALLSNVPLREQPQIQNA- 202

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                            MS L       ++  I SPI G +                 LM
Sbjct: 203 -----------------MSSLKQAWLNLQRTKIRSPIDGYVARRNV-QVGQAVSVGGALM 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +V  ++  ++ A     Q+ +++ G    + F  Y   + K+F  +I  I+        
Sbjct: 245 AVV-SNEQMWLEANFKETQLTNMRIGQPVKIHFDLYG--KNKEFDGVINGIEMGTGNAFS 301

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             P  +   N ++  +   V +K+    F++  + +  G  A       +++
Sbjct: 302 LLPSQNATGNWIKVVQRVPVRIKLDPQQFTETPLRI--GLSATAKVRISDSS 351



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 59/175 (33%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V + S  +G + K   +N  ++  G  L+  +D       +  K ++ N    ++
Sbjct: 57  VGGNQVMVSSQVAGNVAKINADNMDKVHAGDILVELDDTNAKLSFEQAKSNLANAVRQVE 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                +  L +     E +    +  L     L K  +   + F +   +V  +      
Sbjct: 117 QLGFTVQQLQSAVHANEISLAQAQGNLARRVQLEKMGAIDKESFQHAKEAVELAKANLNA 176

Query: 170 RMRSIYLNR-----LDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
               +  N+     + L  +  +  A+ S  Q  L + +          V++ ++
Sbjct: 177 SKNQLAANQALLSNVPLREQPQIQNAMSSLKQAWLNLQRTKIRSPIDGYVARRNV 231


>gi|254418488|ref|ZP_05032212.1| efflux transporter, RND family, MFP subunit [Brevundimonas sp.
           BAL3]
 gi|196184665|gb|EDX79641.1| efflux transporter, RND family, MFP subunit [Brevundimonas sp.
           BAL3]
          Length = 382

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 20/189 (10%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             N+      L    +L     L  A+    ++     N    A   + L   +    Q 
Sbjct: 121 EANVARDDAALERAQQLKARGFLSQASLDTALANQRASN-ANLAAARATLAQTQTHLAQA 179

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           TI +P+AG I+  +S +          L ++V       + A+V   ++  V+ G +ATV
Sbjct: 180 TIRAPVAGLIIS-RSVTKGQIISAGTELFRMV-RDGRLELDAQVPETELAQVRAGQSATV 237

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
                           +  + P ++               + ++         +LR G  
Sbjct: 238 -----TSSEAGTTAGTVRIVTPEVNASTRLG------LARISLSP------GAQLRPGMF 280

Query: 411 AEVLFTAKN 419
           A       +
Sbjct: 281 ARADIDVGD 289



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 86/243 (35%), Gaps = 29/243 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIK-KFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +  +V++SG +   + V  + +   G+      V+ GS + QG PL+   D+     +  
Sbjct: 54  LRRTVTASGSVSAWEEV-PVAAETGGLTAVAVYVDEGSYVRQGQPLVQMNDVLLRAQLRQ 112

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           ++  ++    ++  + +AL+               R +QL        ++         +
Sbjct: 113 QQAQVQLGEANVARDDAALE---------------RAQQLKARGFLSQASLDTALANQRA 157

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           S        L   R+        + ++ L +A + +    L + +++ +   +S     +
Sbjct: 158 S-----NANLAAARATLA-----QTQTHLAQATIRAPVAGLIISRSVTKGQIISAG--TE 205

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
             R+V    LEL   + E +       +     + E       +     +   +    ++
Sbjct: 206 LFRMVRDGRLELDAQVPETELAQVRAGQSATVTSSEAGTTAGTVRIVTPEVNASTRLGLA 265

Query: 279 KLT 281
           +++
Sbjct: 266 RIS 268


>gi|108758003|ref|YP_628796.1| RND family efflux transporter MFP subunit [Myxococcus xanthus DK
           1622]
 gi|108461883|gb|ABF87068.1| efflux transporter, RND family, MFP subunit [Myxococcus xanthus DK
           1622]
          Length = 421

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 107/285 (37%), Gaps = 27/285 (9%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           + A   R+E+L   LG+ +   ++V                 + R+    R ++      
Sbjct: 32  DAAPAPRQEELEMTLGQENVARAEVRQLRSGPGISGNL----QARTAAAVRAEVGGTILD 87

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           ++A      K    +  +  ++   ++ L      V  +   L+    EQ+   R     
Sbjct: 88  IKAQQGQVVKKGEELARI--EDVTLKDQLIAASAAVRTARSALQVAEAEQERATR----- 140

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +A +      +     +EQ +   A+  S+  + ++   +  +++P AG +V  +  S
Sbjct: 141 LSKAGVITQRDFERAELSVEQAKGQLAEARSRHALAQEQLNRARVVAPFAG-VVSERQAS 199

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
           + +  Q S PL  +V   +   + A V   Q++ VK           Y D     F+  +
Sbjct: 200 AGDVVQPSAPLFTVV-DPRTLRLEASVPAAQLEQVKVDTPVEFHVTGYGDR---AFRGTV 255

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           E+I+P++             +V + +   A  + +++L  G  AE
Sbjct: 256 ERINPVVDPATG--------QVRIYV---AIPNTDLQLLAGLFAE 289



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 3/103 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKS 115
           +++   G I   + + G  + +G  L   ED+   D +     +++  R  +   + E+ 
Sbjct: 77  VRAEVGGTILDIKAQQGQVVKKGEELARIEDVTLKDQLIAASAAVRTARSALQVAEAEQE 136

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
               L+    + ++ FE  E  +    G+     S+       
Sbjct: 137 RATRLSKAGVITQRDFERAELSVEQAKGQLAEARSRHALAQEQ 179


>gi|121606436|ref|YP_983765.1| RND family efflux transporter MFP subunit [Polaromonas
           naphthalenivorans CJ2]
 gi|120595405|gb|ABM38844.1| efflux transporter, RND family, MFP subunit [Polaromonas
           naphthalenivorans CJ2]
          Length = 442

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 75/224 (33%), Gaps = 19/224 (8%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN--MLRHINELYDEANLEFANYLKE 261
            L ++   S+  L   +  + +ST  ++E+         +  ++     +  E       
Sbjct: 127 KLSDQVLRSRASLAAMQAQLAQSTATVKESRASLARFEEVARLSGGKVPSAAELDTARAT 186

Query: 262 ISRDLE---QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-- 316
           + R +      +   A+  +  +  E    + +I SPI G ++       +  A   Q  
Sbjct: 187 LDRAVAVEASARANVAEARAAASTDETNLSKASIRSPIDGVVLTRTVDPGNAVAASLQAV 246

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  +        +   V    +  VK G  A+     Y   R     A I ++    ++
Sbjct: 247 TLFTVAEDLTQLRLEVNVDEADVGAVKVGQKASFTVSAYPSRRYP---ATITRVAFGSTK 303

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            DN         V+  +T L  ++ ++ LR G  A     A   
Sbjct: 304 TDN---------VVTYVTYLDVNNADLSLRPGMTAAATIIATER 338



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 16  SLKRMTLLSIIGIIGLITW-----SILLP-----------IEISVSSSGEILNEDNVVEI 59
           ++    ++ I  + GL  W     +   P           + ++V ++G +    +V  I
Sbjct: 37  AIWIAAVVLIALLAGLAYWQAGQQASAAPRYVTETVRKGNLTLNVLANGTLQPTRSV-NI 95

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
            S  SG +K+  V+   +I +G  L+  +  + +D +   + S+  ++  +    + +  
Sbjct: 96  GSELSGTVKRVLVDVNDRIKKGQVLVELDTAKLSDQVLRSRASLAAMQAQLAQSTATVKE 155

Query: 120 LNNKYDVLEKA 130
                   E+ 
Sbjct: 156 SRASLARFEEV 166


>gi|17547445|ref|NP_520847.1| multidrug ABC transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
 gi|17429748|emb|CAD16433.1| probable multidrug resistance transport transmembrane protein
           [Ralstonia solanacearum GMI1000]
          Length = 388

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/320 (10%), Positives = 88/320 (27%), Gaps = 29/320 (9%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           ++  I T    +     + DV         ++LL    + ++     +   + +   S  
Sbjct: 72  IQADIVTVAPKVSGYVERVDVANNQEVRAGQRLLRIDPREYAAQLAQYQAQVEAANASAD 131

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               ++ +   +    + +                   +L    A +++ L+  +    +
Sbjct: 132 NARAQLATQKASIAQAQAQLQSAEHDAQFTAAQTQRYASLVASGAETRDRLSTLQNQAAQ 191

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +    +            I  L                  L Q +       ++  + E 
Sbjct: 192 ARANAQAQRAALTKATLEIAAL---------------QAQLRQAEAQAKTARAQAAVAEV 236

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 + +   G +  +Q  +   +      LM +VP     YI A     Q+  ++ G
Sbjct: 237 NLAATELRASTDGRVGDSQVRA-GQFVSAGTRLMSVVPMH--LYITANFKETQLGRMRIG 293

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDN 401
               +    + D      +  +E + P    Q         T  + +++ ++      D 
Sbjct: 294 QPVHIHVDAFPDE---AIEGHVESLSPGTGAQFSLLPPQNATGNFIKIVQRVPVRIALDV 350

Query: 402 NIELRN----GFPAEVLFTA 417
              L+     G    V    
Sbjct: 351 TDRLKPLLAAGMSVTVDVDT 370


>gi|329296718|ref|ZP_08254054.1| multidrug efflux system protein EmrA [Plautia stali symbiont]
          Length = 387

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 91/277 (32%), Gaps = 34/277 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +    L +  L   + DL   + L   N + +
Sbjct: 105 QQAFEKAQTALATSVRQTHQLMINGKQYQATIKLQQTALDPAESDLKRREPLGAANLIGR 164

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +       V  +  +L   I +       I                 ++ DL +NQ   
Sbjct: 165 EERQHARDAVATAKAQLDVAIQQYNANQAMI-----------------LNTDL-ENQPAV 206

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L       ++  I SP+ G +   +S    +    S PL+ +VP +   ++ A 
Sbjct: 207 KQSAAELRDAWLALQRTDIRSPMDGYVSR-RSVQVGSQISTSTPLLAVVPATN-LWVDAN 264

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+  V+ G  ATV    Y D    ++   +  +D          P  +   N ++ 
Sbjct: 265 FKETQLAGVRIGQPATVISDIYGDDV--EYHGKVVGLDMGTGSAFSLLPAQNATGNWIKV 322

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +   V +++     +   + +  G    V    +N 
Sbjct: 323 VQRLPVRIELDPQQVAQYPLRI--GMSTLVKVDTQNK 357



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 56/174 (32%), Gaps = 10/174 (5%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-------N 105
             N V++ +  SG + K   E+  ++ +G  L++ +  +     +  + ++         
Sbjct: 65  SGNQVQVMAQVSGSVNKVWFEDTDRVKKGDILVSLDKTDAQQAFEKAQTALATSVRQTHQ 124

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L  +    ++ +       D  E   + RE      L               +     + 
Sbjct: 125 LMINGKQYQATIKLQQTALDPAESDLKRREPLGAANLIGREERQHARDAVATAKAQLDVA 184

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
           ++        +   DLEN+ ++ ++        L + +          VS+  +
Sbjct: 185 IQQYNANQAMILNTDLENQPAVKQSAAELRDAWLALQRTDIRSPMDGYVSRRSV 238


>gi|269140109|ref|YP_003296810.1| multidrug resistance protein A [Edwardsiella tarda EIB202]
 gi|267985770|gb|ACY85599.1| multidrug resistance protein A [Edwardsiella tarda EIB202]
 gi|304559944|gb|ADM42608.1| multidrug resistance protein A [Edwardsiella tarda FL6-60]
          Length = 391

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +   ++ +  LS    D      L    A+ +
Sbjct: 99  QQAYERAKTALANSVRQTHQLMVNAKQYQANIAMNQVALSKASSDYQRRLALSRSGAIGR 158

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L   +  +  +   L   I +       I     E          ++           
Sbjct: 159 EELQHAQDAMESARAALDVAIQQYNANQALILNTPLEKQPAVLQAAAQVRDAWL------ 212

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I SP+ G +   +S         + PLM IVP     +I A 
Sbjct: 213 ------------ALERTQIRSPVTGYVSQ-RSVQVGAQISPNTPLMAIVPA-SQMWIDAN 258

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G  ATV    Y D     FK  +  +D          P  +   N ++ 
Sbjct: 259 FKETQLANMRIGQPATVVSDMYGDDV--VFKGKVAGLDMGTGSAFSLLPAQNATGNWIKV 316

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++     + + + +
Sbjct: 317 VQRLPVRIELDPQQLAQHPLRI 338



 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 64/175 (36%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N+V+I +  SG + +   E    +  G  L+T +  +     +  K ++ N      
Sbjct: 58  VTGNLVQINAQVSGSVTRVNFEGTDLVKAGDILVTLDKTDAQQAYERAKTALANSVRQTH 117

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  ++ ++   +   N+  + + + + +    L   G       +     + S   +L +
Sbjct: 118 QLMVNAKQYQANIAMNQVALSKASSDYQRRLALSRSGAIGREELQHAQDAMESARAALDV 177

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
            + +  +     L+  LE + ++L+A        L + +          VSQ  +
Sbjct: 178 AIQQYNANQALILNTPLEKQPAVLQAAAQVRDAWLALERTQIRSPVTGYVSQRSV 232


>gi|149006793|ref|ZP_01830479.1| competence factor transport protein ComB [Streptococcus pneumoniae
           SP18-BS74]
 gi|307126272|ref|YP_003878303.1| transport protein ComB [Streptococcus pneumoniae 670-6B]
 gi|147761708|gb|EDK68672.1| competence factor transport protein ComB [Streptococcus pneumoniae
           SP18-BS74]
 gi|306483334|gb|ADM90203.1| transport protein ComB [Streptococcus pneumoniae 670-6B]
 gi|332076502|gb|EGI86964.1| bacteriocin secretion accessory family protein [Streptococcus
           pneumoniae GA17545]
          Length = 449

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 48/439 (10%), Positives = 147/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV------SQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               + +  +    +L  +N         ++   +  +   ++  ++   I + ++ L  
Sbjct: 189 RDYQTAKSAMETGASLASQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 244 INELYDEANLEFA--------------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               Y  +  + A               +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSATQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|256420009|ref|YP_003120662.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
 gi|256034917|gb|ACU58461.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
          Length = 451

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 75/277 (27%), Gaps = 55/277 (19%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                  +        +     +  +A L   +      K L  +  VS+++    E   
Sbjct: 98  RDKATASLSQAQAQLANTAASLNAFKAKLEQSKAAYDRNKELLAQKVVSRSEFETAEATY 157

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +  +                                 +  +  N+       + +T  
Sbjct: 158 RSALADYNA-----------------------------AAEQVNSNRYAVQSAKAGVTEA 188

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ----PLMKIVPHSKLTYIRAKVTP--K 337
               ++ TI++ + G +               Q     +M+I   + L  +  +V     
Sbjct: 189 NTNLQRTTIVASMDGVVSLLPVKKGERVVGTGQMSGTEIMRI---ADLNIMEVQVDVGEN 245

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-------EYYEVI 390
            I  VK   TA V    Y+D +   FK I+ +I                       Y V 
Sbjct: 246 DIPRVKYNDTAIVEVDAYSDRK---FKGIVTQIASSSKGAATASAATTSSAEQVTSYIVH 302

Query: 391 LKITDLAFSD-------NNIELRNGFPAEVLFTAKNT 420
           ++I   +++D        N   R G  A V    +  
Sbjct: 303 IRILAESYADLIDPAHPKNFPFRPGMSASVDIQTRRK 339



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 70/182 (38%), Gaps = 9/182 (4%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
             VS+SG+I  E  V  + S  SG I    V  G  + +G  L          + D    
Sbjct: 45  EVVSASGKIYPETEVK-VSSDVSGEIVDLPVLEGDSVKKGQVLARIYADVYGSVRDKATA 103

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           S+   +  +    ++L+    K +  + A++  +E L   +          F    ++  
Sbjct: 104 SLSQAQAQLANTAASLNAFKAKLEQSKAAYDRNKELLAQKVVSRSE-----FETAEATYR 158

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +L         +  NR  +++  + +    ++ Q+  T++ ++     VS   + + ER
Sbjct: 159 SALADYNAAAEQVNSNRYAVQSAKAGVTEANTNLQRT-TIVASM--DGVVSLLPVKKGER 215

Query: 222 IV 223
           +V
Sbjct: 216 VV 217


>gi|254241503|ref|ZP_04934825.1| hypothetical protein PA2G_02201 [Pseudomonas aeruginosa 2192]
 gi|126194881|gb|EAZ58944.1| hypothetical protein PA2G_02201 [Pseudomonas aeruginosa 2192]
          Length = 354

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/361 (11%), Positives = 96/361 (26%), Gaps = 82/361 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++   VE+   +  G  L   +D +                       +  D L  + 
Sbjct: 56  GFVQDVLVEDNQPVKAGQLLARLDDRDF----------------RTALAAAEADVLGAEA 99

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +++      + +Q L    +                                       K
Sbjct: 100 NLVNAEANLQRQQALIEQAR--------------------------------------AK 121

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A L   + + +  + L  K A S  +  Q +  +  ++  L E         + +
Sbjct: 122 VRAEQAELVFARHEQSRYQTLASKGAGSLQNAQQAQSRIDTASARLAEGQAAVDATRKQV 181

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           + L                  + Q +       ++            + +P  G +   +
Sbjct: 182 SVLEAR---------------VGQARGDLQRMQARRDQARLDLSYCELRAPFDGLV-GRR 225

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y      L+ +VP  +   +       Q+ HV  G    +R   +     +  +
Sbjct: 226 QLRVGAYVTPGSALLAVVPLQQAYVV-GNFQETQLTHVSPGQAVEIRVDTFP---GEVLR 281

Query: 365 AIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFT 416
             ++ I P      +    +  T  + +V+ +I      +       +LR G   E    
Sbjct: 282 GHVDSIAPATGLSFAPIAPDNATGNFTKVVQRIPVKIVLEPRQAMAGKLRVGMSVEARID 341

Query: 417 A 417
            
Sbjct: 342 T 342


>gi|330818317|ref|YP_004362022.1| Efflux pump membrane protein [Burkholderia gladioli BSR3]
 gi|327370710|gb|AEA62066.1| Efflux pump membrane protein [Burkholderia gladioli BSR3]
          Length = 404

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            + S   +L   + R+R +Y +      + +   + LS  Q DL     + +  AVSQ +
Sbjct: 98  ALQSAEANLAQTVRRVRGLYADDDQYRAQVAQRESDLSKAQDDLRRRLAVAQTGAVSQEE 157

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                             I   ++ ++      D A  + A  +   +     N      
Sbjct: 158 ------------------ISHARDAVKAAQASLDAAKQQLAANVALTANTTVANHPDVLA 199

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             + +        + T+ +P+ G +   +S           PLM +VP     ++ A   
Sbjct: 200 AAATVRNAYLNNARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPLG-QIWVDANFK 257

Query: 336 PKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             Q+ H++ G   +V    Y                      + P  +   N ++  +  
Sbjct: 258 EVQLDHMRIGQPVSVTADIYGSSVKYHGKVIGFSAGTGSAFSLLPAQNATGNWIKVVQRL 317

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + +       + + +      +V   
Sbjct: 318 PVRIALEPQELERHPLRIGLSMQVDVDIK 346



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 55/181 (30%), Gaps = 10/181 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-- 109
              NVV+I    +G +     ++   I  G PL+  +  +    +   + ++        
Sbjct: 55  VNGNVVQITPQVTGTVIAVNADDTQSIRIGQPLVKLDPADAAIALQSAEANLAQTVRRVR 114

Query: 110 ---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
               D ++        + D+ +   + R    +   G             + +   SL  
Sbjct: 115 GLYADDDQYRAQVAQRESDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVKAAQASLDA 174

Query: 167 KLTRMRS--IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
              ++ +         + N   +L A  +     L   +N         V++  +   +R
Sbjct: 175 AKQQLAANVALTANTTVANHPDVLAAAATVRNAYLNNARNTLPAPVTGYVAKRSVQVGQR 234

Query: 222 I 222
           +
Sbjct: 235 V 235


>gi|255524059|ref|ZP_05391020.1| secretion protein HlyD family protein [Clostridium carboxidivorans
           P7]
 gi|296188484|ref|ZP_06856872.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
 gi|255512196|gb|EET88475.1| secretion protein HlyD family protein [Clostridium carboxidivorans
           P7]
 gi|296046748|gb|EFG86194.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Clostridium carboxidivorans P7]
          Length = 326

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 110/347 (31%), Gaps = 90/347 (25%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + K  V+ GS++  G  ++  +  +  +  D            ++T K+ALD + +K   
Sbjct: 66  VTKVNVQVGSKVNAGDSIVYLDTTDLKNQQD-------QAEAKVNTAKAALDKVQSKARP 118

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            + +                                                   E    
Sbjct: 119 EDISIA-------------------------------------------------EAAID 129

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
               +  +   +   +K L++    ++ +L Q E  +  +  +L  +    K  L  +N+
Sbjct: 130 NDNKIYENALNNYNRIKKLYDTGNETKQNLEQMEASLNTAKDKLISD----KGTLDKLND 185

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +             +++  ++    +  + +           I SPI+GT+      
Sbjct: 186 GATK-------------QEIASSEALVNEAQAAVNSAASQVNNGIITSPISGTVSECNIH 232

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                A     L+KIV  +   YI   V     + +K G    V+     DI +K+FK  
Sbjct: 233 -VGEIAGTGVTLVKIV-GNNQLYIDGYVPENVFKKIKVGEEVVVKA---DDIPDKRFKGE 287

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           I  I+P +S    N        V + + + A       L+ G   E+
Sbjct: 288 ISVINPTLSSNGKN-------VVRVTLKEGADI-----LKPGMITEI 322


>gi|153871091|ref|ZP_02000349.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152072445|gb|EDN69653.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 72

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 1  MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
          M  + +  L+   P     +  ++++ +     W+    ++     +G+++   +V  I+
Sbjct: 4  MREYKYL-LETGPPLFSHLILWMTVLFLATAGLWAHYSTLDEVTRGTGKVIPSRHVQVIQ 62

Query: 61 SPFSGIIKKF 70
          +   GI+ +F
Sbjct: 63 NLEGGIVSRF 72


>gi|289648595|ref|ZP_06479938.1| RND family efflux transporter MFP subunit [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298486480|ref|ZP_07004540.1| pyoverdine-specific efflux macA-like protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298158957|gb|EFI00018.1| pyoverdine-specific efflux macA-like protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
          Length = 390

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 17/182 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+ P     +  L +  +I +  W I+                IE SV++ G +    
Sbjct: 1   MKRSRPPRRALLVALCLFPVIAVCAWQIMPDSKGHAATVTVTRSNIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  +G I K   + G Q+ +G  L+  +       +D  + +I+NL+  +  ++
Sbjct: 61  YV-DVGSQATGQIMKIHAQVGDQVKEGDLLVEIDPSTQKARLDAARYAIENLKAQLQEQR 119

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +  +    K    ++       +  D       +  +     +      +      +RS 
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAA--ESEFRATQARVDMFKAQILEAQAALRSD 177

Query: 175 YL 176
             
Sbjct: 178 EA 179



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 71/223 (31%), Gaps = 12/223 (5%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIYAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWSSTVRQILPVPPRPLDQANQGGGSPSSARKSGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            V+L    L   +++  L      ++ F A   +    +  P+
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTTQIFFVAG--SAQNTLTAPL 330


>gi|162453100|ref|YP_001615467.1| HlyD family secretion protein [Sorangium cellulosum 'So ce 56']
 gi|161163682|emb|CAN94987.1| putative HlyD family secretion protein [Sorangium cellulosum 'So ce
           56']
          Length = 416

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 70/208 (33%), Gaps = 18/208 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + ER   +++ E+ E   E              +       +      L   Q       
Sbjct: 128 ELERKNSQASQEVAEKSAEMGLGSTDAARTAAHSTKVAGANITLRRAQLNATQAQLKTAE 187

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY------AQQSQPLMKIVPHSKLTYIR 331
             +   E   ++  I +PIAGT++       +              +M +   S L  + 
Sbjct: 188 LAVQDAELRLKETQIYAPIAGTVLDVAVEKGTLVSSALTNVSGGSAVMTLADLSNLRIVG 247

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A +   QI  V  G    +R   Y D     F+ +++++ P+  +  + +     ++V +
Sbjct: 248 A-IDEAQIGRVAPGQRVDIRVDAYGDR---VFQGVVDRVSPLGKEVSSVVT----FDVEI 299

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + D   S     LR+G  A+V      
Sbjct: 300 VVNDKDASL----LRSGMSADVEIVTAE 323



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 59/152 (38%), Gaps = 1/152 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  + ++SG+I  +  V E+KS   G + +  V+ G  +  G  L+  +  +    + 
Sbjct: 46  GNLTETAAASGKIEPDVQV-EVKSRAPGQVIEVLVKEGDTVEAGQLLVRLDPTDAERDLA 104

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +V+   ++  +    +++     +    + + E  E+     LG   +  +   +  +
Sbjct: 105 AARVARDRVKADLAAANASVAVAELERKNSQASQEVAEKSAEMGLGSTDAARTAAHSTKV 164

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           +    +L+          L   +L  + + LR
Sbjct: 165 AGANITLRRAQLNATQAQLKTAELAVQDAELR 196


>gi|190890901|ref|YP_001977443.1| protein secretion protein, HlyD family [Rhizobium etli CIAT 652]
 gi|190696180|gb|ACE90265.1| probable protein secretion protein, HlyD family [Rhizobium etli
           CIAT 652]
          Length = 413

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 99/313 (31%), Gaps = 13/313 (4%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E +   ++   Y  +        +Q+L        +   +          +L      ++
Sbjct: 85  ESTDDAYVKADYTTVAPKVAGYIKQVLVNDNDVVKSGQVLARIDDRDFQAALSQARADVK 144

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +      +++ + +L ++++   +  +   +   +          +       +     +
Sbjct: 145 AAEAAITNIDAQIALQQSVIQQAKATVDASQASLDFAVSDAARSARLITNGAGTQSRAEQ 204

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +      + E    A +   N +  +  + EQ         +     E       I
Sbjct: 205 TQSARDQAAAAV-ERDRAALVAAENKVPVLRTEREQAAAQRDRAAAAAHQAELNLSYTDI 263

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++ + GT+   +S     Y      LM +VP   +  + A     Q+ +V+ G +  ++ 
Sbjct: 264 VAAVDGTV-GARSIRVGQYVTSGTQLMAVVPLHAVYVV-ANFKETQLTYVRPGQSVEIKV 321

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNI---EL 405
             + DI     K  ++ + P    +      +  T  + +++ +I      D+      L
Sbjct: 322 DSFPDI---AIKGHVDSVSPASGLEFSLLPPDNATGNFTKIVQRIPVKIVIDDGALSGLL 378

Query: 406 RNGFPAEVLFTAK 418
           R+G   E     K
Sbjct: 379 RSGMSVEPEVDTK 391



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 42/123 (34%), Gaps = 1/123 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK+  V +   +  G  L   +D +    +   +  +K     I    + +    +  
Sbjct: 105 GYIKQVLVNDNDVVKSGQVLARIDDRDFQAALSQARADVKAAEAAITNIDAQIALQQSVI 164

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   ++ +  L DF     +  +++   G  +  R+ + +  R ++      D    
Sbjct: 165 QQAKATVDASQASL-DFAVSDAARSARLITNGAGTQSRAEQTQSARDQAAAAVERDRAAL 223

Query: 185 SSL 187
            + 
Sbjct: 224 VAA 226


>gi|15902088|ref|NP_357638.1| competence factor transport protein ComB [Streptococcus pneumoniae
           R6]
 gi|116515701|ref|YP_815485.1| competence factor transport protein ComB [Streptococcus pneumoniae
           D39]
 gi|30315901|sp|P59654|COMB_STRR6 RecName: Full=Transport protein ComB
 gi|663280|gb|AAA69511.1| ComB [Streptococcus pneumoniae]
 gi|15457575|gb|AAK98848.1| Transport protein ComB [Streptococcus pneumoniae R6]
 gi|116076277|gb|ABJ53997.1| competence factor transport protein ComB [Streptococcus pneumoniae
           D39]
          Length = 449

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 50/439 (11%), Positives = 145/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV--------SQND---------LNQQERIVYKSTLELRE 232
               + +  +    +L  +N          SQ +         + Q E  + +    L  
Sbjct: 189 RDYQTAKSAIETGTSLAGQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 233 NIHEQKN---MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              +         + + L  +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELSLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGTLLAQLYPSLEREGKAKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|292670316|ref|ZP_06603742.1| RND family efflux transporter MFP subunit [Selenomonas noxia ATCC
           43541]
 gi|292648047|gb|EFF66019.1| RND family efflux transporter MFP subunit [Selenomonas noxia ATCC
           43541]
          Length = 370

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 69/215 (32%), Gaps = 29/215 (13%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLEQNQRTFADEMSKL 280
           +    L    +E K            A     NYL+ I      DLE  +  +    S L
Sbjct: 88  QVVATLDGKDYEAKRDQAAYRVTNTRAKYNRMNYLESIGAKSKSDLEDAEYNYDTAQSNL 147

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP----LMKIVPHSKLTYIRAKVTP 336
                   +  I +PI+G +V     +    A Q       +M+I   S    I+AKV  
Sbjct: 148 EEANSDANETIITAPISGVVVGEPK-TVGTMAVQGSDNPTVIMRIANLSAK-QIKAKVDE 205

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE----------- 385
             I +++ G  AT     +AD     FKA + KI         +  +             
Sbjct: 206 TDIGNIRIGQEATFTVDAHADET---FKARVSKISQTDVSNSWDTSSSGSSSTSTSASVI 262

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           YY V L + D         L     A V+    + 
Sbjct: 263 YYYVTLDVEDPENL-----LLPAMTARVVINTADR 292



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 45/132 (34%), Gaps = 12/132 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+ +V ++G I   D+V E+ S  +  I    V+    +  G  + T +  +     D  
Sbjct: 47  IKSTVEATGTIRPVDSV-EVSSKITARINSVLVKENDTVTAGQVVATLDGKDYEAKRDQA 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + N R              N+ + LE      +  L D    Y +  S +      +
Sbjct: 106 AYRVTNTRAKY-----------NRMNYLESIGAKSKSDLEDAEYNYDTAQSNLEEANSDA 154

Query: 160 VYRSLKMKLTRM 171
               +   ++ +
Sbjct: 155 NETIITAPISGV 166


>gi|257440342|ref|ZP_05616097.1| putative biotin-requiring enzyme [Faecalibacterium prausnitzii
           A2-165]
 gi|257197188|gb|EEU95472.1| putative biotin-requiring enzyme [Faecalibacterium prausnitzii
           A2-165]
          Length = 546

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 55/412 (13%), Positives = 134/412 (32%), Gaps = 63/412 (15%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  ++S +G +    N   +KS   G +   + E G  + +G+ L T +  + +   +  
Sbjct: 77  VSNTLSGTGTLNPA-NTYTVKSLVEGKVLTGEFEEGDVLDEGSILYTLDSSDASTNFEKA 135

Query: 100 KVSIKN-------------LRCHIDTEKSAL-----DFLNNKYDVLEKAFESREEQLLDF 141
           +++++              +R  +D   S L     D + +  +V      S+    L+F
Sbjct: 136 EIAMQQAQRGYDKVVDRQYVRAEVDGTVSTLKVAKGDEVTSGQEVAIIRDSSKMLLTLEF 195

Query: 142 LG--KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                 + +  +     +   +  L   +T +        D  +  +LL   ++   ++ 
Sbjct: 196 PAADAANFSVGQTAQVTLDGTFEQLDGTVTSVTG-----TDALSTGNLLTRTVTIAVQNA 250

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +    +    S N ++      +    E R    +    +  I+    +   +    +
Sbjct: 251 GGLTT-AQAATASINGVSSIGSATFGYQAE-RTLTAQAAGTVTSIHVQEGQTVAKDDILI 308

Query: 260 KEISRDLEQNQRTFADEMS----KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           +    DL ++ ++ ++ +      L  L+ T    T+ SPI+GTI+  +     +  +  
Sbjct: 309 ELSGDDLTESIQSASETLRSAEISLQNLQDTMANYTVTSPISGTIIE-KDAKVGDAVKSG 367

Query: 316 QPL--------MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             L        +++V +             QI  +  G    +      D         +
Sbjct: 368 DTLCVIYDLSYLEMVINVDEL---------QISSLSVGQKVQITADAVQDKNYV---GTV 415

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            ++    +           Y V ++I +         LR G  A        
Sbjct: 416 TRVSMKGASNGGTTT----YPVTIRIDETD------GLRPGMNANAEIVVAE 457



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 8/85 (9%), Positives = 27/85 (31%), Gaps = 2/85 (2%)

Query: 35  SILLPIEISV-SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +    I       S     +     + +  +G +    V+ G  + +   L+     + T
Sbjct: 258 AATASINGVSSIGSATFGYQAER-TLTAQAAGTVTSIHVQEGQTVAKDDILIELSGDDLT 316

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALD 118
           + I     ++++    +   +  + 
Sbjct: 317 ESIQSASETLRSAEISLQNLQDTMA 341


>gi|189219527|ref|YP_001940168.1| membrane-fusion protein [Methylacidiphilum infernorum V4]
 gi|189186385|gb|ACD83570.1| Membrane-fusion protein [Methylacidiphilum infernorum V4]
          Length = 291

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 78/217 (35%), Gaps = 11/217 (5%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKST--LELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           + + +   +++ D  + E  V ++   +EL +   E   +    +E   +          
Sbjct: 66  QRVKKGQLLAELDPVRFEDAVRQAEHTVELDKAALENAEITYRRDEALVKELYVSLQERD 125

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                L++ +     + + L++  +  +   + +P  G I  ++     +      P+  
Sbjct: 126 NALAALKEARNKLKADEALLSLARRELQDSKLYAPQDGVI-EDRILEPGDMVTPQTPVFT 184

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QD 378
           +    +  ++RA V    +  +  G  A +    Y       +   I  +     +  + 
Sbjct: 185 MA-LDRPVWVRAYVPESYLGKIFLGMKAEILTDSYPGQVFPGWIGFISPVSEFTPKNVET 243

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +L+T+  Y+V +        +++  LR G PA V  
Sbjct: 244 PDLRTRLVYQVRV-----YSENSDYRLRLGMPATVRI 275



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 56/164 (34%), Gaps = 10/164 (6%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV--VEIK--SPFSGIIKKFQVENG 75
           + LL+++ +   +     + +     S G +    NV   E++     +G I K  V+ G
Sbjct: 12  IALLALLAVGIFL----FVRLH--FYSPGVLTIYGNVDIREVQLAFYDTGRILKMYVQEG 65

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++ +G  L   + +   D +   + +++  +  ++  +            L  + + R+
Sbjct: 66  QRVKKGQLLAELDPVRFEDAVRQAEHTVELDKAALENAEITYRRDEALVKELYVSLQERD 125

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
             L       +   +      ++               +  +R+
Sbjct: 126 NALAALKEARNKLKADEALLSLARRELQDSKLYAPQDGVIEDRI 169


>gi|90023129|ref|YP_528956.1| putative secretion protein [Saccharophagus degradans 2-40]
 gi|89952729|gb|ABD82744.1| secretion protein HlyD [Saccharophagus degradans 2-40]
          Length = 393

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 47/363 (12%), Positives = 124/363 (34%), Gaps = 46/363 (12%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + L+  + ++ + +WS       +V S+     + +++++ S  +G+I      +   I 
Sbjct: 15  VGLVIFVVVLTISSWSYATR---NVESTDNATVQCDLIDVVSEVNGVIDTITFTDDQWIE 71

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +    +  ED      +   + ++   +      ++ L  +  + D   +  +S ++   
Sbjct: 72  KTGLAVKIEDSLFVSELKRSEAALAIEQASYIDAQNNLKTIMVELDTNIERAKSSKQSAQ 131

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             +    S+  +     I+S                             +  ++  +++ 
Sbjct: 132 SIVDSMDSSIEEARQELIAS-----------------------------KKDMTFLEENF 162

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNMLRHINELYDEANLEFA 256
             +  L+++  VS+ D    +R           +   I+   ++          AN    
Sbjct: 163 NQISRLYKQQMVSETDYKNAKRQFESKQAMHSSIESKINRLTSLRDVETNNVYLANKNLE 222

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKT-------REQKTILSPIAGTIVYNQSFSSS 309
                    L+  +      ++++ + +          ++  IL+  +G I   +  SS 
Sbjct: 223 ALETTKDSQLKSAKAKVDTALARVNVAQAEYDLAALNLKRTNILAKRSGFITN-RRISSG 281

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           +Y +  QP+  IV      +I+A     Q+  ++KG         Y +I    F+  +E 
Sbjct: 282 DYIEIGQPIASIVSCQDNPWIQANFKETQVGKMQKGQKVEFTIDTYPEI---VFEGYLES 338

Query: 370 IDP 372
           I  
Sbjct: 339 ISS 341


>gi|227326210|ref|ZP_03830234.1| hypothetical protein PcarcW_02363 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 421

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 101/312 (32%), Gaps = 36/312 (11%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           + +    L   ++   +    RE Q ++                +      +      ++
Sbjct: 65  QAAKQTTLAAPFEGTIREVLVREGQRVEQGQTLLILDPGQIEIQLRQAQAEVLKTQREVQ 124

Query: 173 SIYLNRLDLE-----NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           S+       E        S  R+  S+ Q +L   + LFE+  V++ +++  ++ +    
Sbjct: 125 SLRHWEQSAEVSRARRAVSSARSTFSNTQANLRDTQALFERGIVARMEVDTLKQQIRSQE 184

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L     E + +L   N                   D +  +    +   +  +L    
Sbjct: 185 QDLSAAQEELRTVLARGN-----------------GEDRKIAEMELTNAQVRYQMLATQV 227

Query: 288 EQKTILSPIAGTIVYNQ--------SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           E++T+ +P +G +V              S     Q  PL  ++       +  +V    +
Sbjct: 228 ERQTVKAPFSGFMVRPATPDNGKPVVIQSGLLVSQGTPLFGVI-AQDRFQVSTRVEETDL 286

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +++G    V    ++          +  ID      + +     YY+V++ + D   +
Sbjct: 287 HQLREGMPVNVSGDGFSGQI---LTGKVASIDMQADAAEMSGSGA-YYDVVVSL-DTPLA 341

Query: 400 DNNIELRNGFPA 411
           D    +R G  A
Sbjct: 342 DLRQNIRLGMSA 353


>gi|305680111|ref|ZP_07402921.1| efflux transporter, RND family, MFP subunit [Corynebacterium
           matruchotii ATCC 14266]
 gi|305660731|gb|EFM50228.1| efflux transporter, RND family, MFP subunit [Corynebacterium
           matruchotii ATCC 14266]
          Length = 626

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 62/458 (13%), Positives = 122/458 (26%), Gaps = 104/458 (22%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSG------------EILNEDNVVEIKSPF-----SG 65
           + II +IG+  +S          +S              +    NV   KS       +G
Sbjct: 19  VVIITLIGVAMYSFFANSSAITLASSDVQVLDKRDNSQRVAVSGNVEPQKSMVLSTRLTG 78

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + +  V+ G ++     +   +  +    +   K        +   E    +   N+Y 
Sbjct: 79  PVNQLNVKVGDRVQADQLVANLDVTDKETELAKSKAQAATNEANSIAEIKGAESRYNRYK 138

Query: 126 VL-----------EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS----------- 163
            L            KA     E   D   +     S +   G      +           
Sbjct: 139 ELLDNGMNQDINNAKAALRTAESAYDEANRNFQLESALRGNGKQQDIAAQQSKIENARQD 198

Query: 164 ------------------LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                             L+ + T  RS+   + +L    + L       Q  +      
Sbjct: 199 SMNTNVEAARMGLKAVGTLQDQDTERRSLATEQSNLAELKAQLDGASPEQQVQIQAQIKA 258

Query: 206 FEKNAVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------- 257
            E+   + QN +N+Q R    S L+  +  ++ +   R++ E  D      A        
Sbjct: 259 SEERVETLQNSVNKQYRNTIDSGLDAADVTNKLQAADRNLRESQDSYEATLAQADNKLVT 318

Query: 258 ----------YLKEISRDLEQNQRTFADEMSKLTILEKTREQ------------------ 289
                       K+ +  L   +R    +M           +                  
Sbjct: 319 DQRNVAKTFEEKKDAATALAVAERNAQFQMEDNQAAIDNAVRNARAAQASNNAGDNQLKL 378

Query: 290 ----KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 I +P  G +    +    + A  +  LM I        + A V    +  +  G
Sbjct: 379 DIASAQIRAPFDGVVTNVAA-KQGSAANGA--LMTIA-DDARMIVHANVKEIDVAKIAVG 434

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 F       +KKF+  +  +  + + Q+     
Sbjct: 435 QRVE--FTT-PGTGDKKFQGKVSFVSTVAAPQETPATP 469


>gi|254252533|ref|ZP_04945851.1| Multidrug resistance efflux pump [Burkholderia dolosa AUO158]
 gi|124895142|gb|EAY69022.1| Multidrug resistance efflux pump [Burkholderia dolosa AUO158]
          Length = 405

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 87/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ +R      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVRAAQASLDAAQQQLASNRALTANTTIASHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        +  + +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 LAAAAKVRDAYLANARNVLPAPVTGYVAK-RSVQVGQRVSPGNPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRVGQPVELTADIYGSSVVYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++       + + +      +V   
Sbjct: 317 RLPVRIELDPKELDKHPLRIGLSMQVDVNIK 347



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 61/181 (33%), Gaps = 10/181 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L   L   +  +   +  ++   +V  +      
Sbjct: 116 GLFVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVRAAQASLDA 175

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
             + +  NR       + +  ++L A        L   +N+        V++  +   +R
Sbjct: 176 AQQQLASNRALTANTTIASHPNVLAAAAKVRDAYLANARNVLPAPVTGYVAKRSVQVGQR 235

Query: 222 I 222
           +
Sbjct: 236 V 236


>gi|304311902|ref|YP_003811500.1| Multidrug efflux pump, membrane fusion (MFP/HlyD) family subunit
           EmrA [gamma proteobacterium HdN1]
 gi|301797635|emb|CBL45856.1| Multidrug efflux pump, membrane fusion (MFP/HlyD) family subunit
           EmrA [gamma proteobacterium HdN1]
          Length = 364

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 61/417 (14%), Positives = 126/417 (30%), Gaps = 103/417 (24%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDN-----VVEIKSPF-SGIIK 68
            + + +  L ++ +   + WS L         SG  ++ DN        + +P  +G++ 
Sbjct: 20  RTRRLLMALGVLVVACGLVWSYL--------VSGRYVSTDNAYVKANKILLAPDVNGLVV 71

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             Q E    +  G  L   +       +D  K  +      I+ +K+             
Sbjct: 72  AVQTEENQYVHAGDTLFRIDPRPYEIQLDKAKADVAGAAIKINEQKA------------- 118

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                  ++   ++   R+        R       +L  +++L+
Sbjct: 119 -----------------------LYQQRVADRGRAQAEAEHYER-------ELARQTNLI 148

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
               +S  +      NL      ++ +L   E+ V +S   L        N + +I    
Sbjct: 149 HNGAASEVQRDDATLNLAR----ARQNLLMLEQEVAESLAAL--------NNVPNIQPEQ 196

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
               L      ++   DL                         + +P  G +      S 
Sbjct: 197 HPLYLAALAQQRKAEIDLAHT---------------------VVKAPANGYV--GSPPSV 233

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +YA+   PL+  V   K  +I A     ++  VK G   T+    Y +     +   +E
Sbjct: 234 GDYARAGLPLVNFV-AQKPLWIEANFKETELTDVKIGQPVTITVDTYPNA---VWTGKVE 289

Query: 369 KIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTAK 418
            I P    +         +  + +V+ +I     +     ++ LR+G   EV     
Sbjct: 290 SISPATGSEFSLLPAQNSSGNWVKVVQRIATRIAVESGPTDLALRSGMSTEVNIDTG 346


>gi|294624991|ref|ZP_06703642.1| membrane fusion protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600713|gb|EFF44799.1| membrane fusion protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 400

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 91/322 (28%), Gaps = 28/322 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L+         +     K  V +       + LL    + +    +     I++    + 
Sbjct: 77  LQADSVAVAPRVSGYVTKVLVSDNQIVEAGQPLLQIDDRTYQATLQQAEAAIAARQADIV 136

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                + +     L    + +   A L   Q ++     L    A +       +  + +
Sbjct: 137 AATANVSAQESALLQARTQVTAAAASLKFAQAEVKRFAPLAASGADTHEHQESLQHDLAR 196

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  +      + K     I                     LEQ Q       +       
Sbjct: 197 ARAQYDAAQAQAKAGESQIQAS---------------RAQLEQAQAGVKQATADADQARV 241

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             E   + S I G +  +++     +       M IVP   L  + A     Q+  ++ G
Sbjct: 242 AVEDTRLTSRIHGRV-GDKTVQVGQFLGAGTRTMTIVPQQSLYLV-ANFKETQVGLMRPG 299

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLA 397
             A +     + ++       +E + P    Q         T  + +V+    ++I  LA
Sbjct: 300 QPAEIEVDALSGVK---LHGKVESLSPGTGSQFALLPPENATGNFTKVVQRVPVRIRVLA 356

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             +    L  G   EV    ++
Sbjct: 357 GEEARKVLVPGMSVEVTVDTRS 378


>gi|168486705|ref|ZP_02711213.1| transport protein ComB [Streptococcus pneumoniae CDC1087-00]
 gi|183570321|gb|EDT90849.1| transport protein ComB [Streptococcus pneumoniae CDC1087-00]
          Length = 449

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 50/439 (11%), Positives = 145/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGTEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV--------SQND---------LNQQERIVYKSTLELRE 232
               + +  +    +L  +N          SQ +         + Q E  + +    L  
Sbjct: 189 RDYQTAKSAMETGASLASQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 233 NIHEQKN---MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              +         + + L  +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|148985385|ref|ZP_01818590.1| fatty acid/phospholipid synthesis protein [Streptococcus pneumoniae
           SP3-BS71]
 gi|149023475|ref|ZP_01836064.1| DNA polymerase I [Streptococcus pneumoniae SP23-BS72]
 gi|149025548|ref|ZP_01836477.1| competence factor transport protein ComB [Streptococcus pneumoniae
           SP23-BS72]
 gi|147922343|gb|EDK73463.1| fatty acid/phospholipid synthesis protein [Streptococcus pneumoniae
           SP3-BS71]
 gi|147929350|gb|EDK80348.1| competence factor transport protein ComB [Streptococcus pneumoniae
           SP23-BS72]
 gi|147929798|gb|EDK80788.1| DNA polymerase I [Streptococcus pneumoniae SP23-BS72]
 gi|301793356|emb|CBW35720.1| bacteriocin transport accessory protein [Streptococcus pneumoniae
           INV104]
 gi|301799226|emb|CBW31744.1| bacteriocin transport accessory protein [Streptococcus pneumoniae
           OXC141]
          Length = 449

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 47/439 (10%), Positives = 146/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV------SQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               + +  +    +L  +N         ++   +  +   ++  ++   I + ++ L  
Sbjct: 189 RDYQTAKSAMETGASLASQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 244 INELY--------------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               Y               +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|320324859|gb|EFW80931.1| RND family efflux transporter MFP subunit [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329224|gb|EFW85221.1| RND family efflux transporter MFP subunit [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330987405|gb|EGH85508.1| RND family efflux transporter MFP subunit [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331010693|gb|EGH90749.1| RND family efflux transporter MFP subunit [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 390

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 17/182 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+ P     +  L +  +I +  W I+                IE SV++ G +    
Sbjct: 1   MKRSRPPRRALLVALCLFPVIAVCAWQIMPDSKGHAATVTVTRSNIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  +G I K   + G Q+ +G  L+  +       +D  + +I+NL+  +  ++
Sbjct: 61  YV-DVGSQATGQIMKIHAQVGDQVKEGDLLVEIDPSTQKARLDAARYAIENLKAQLQEQR 119

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +  +    K    ++       +  D       +  +     +      +      +RS 
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAA--ESEFRATQARVDMFKAQILEAQAALRSD 177

Query: 175 YL 176
             
Sbjct: 178 EA 179



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 72/223 (32%), Gaps = 12/223 (5%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIYAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWSSTVRQILPVPPRPLDQANQGGGSPSSARKSGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            V+L    L   +++  L     A++ F A   +    +  P+
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTAQIFFVAG--SAQNTLTAPL 330


>gi|167616063|ref|ZP_02384698.1| HlyD family secretion protein [Burkholderia thailandensis Bt4]
          Length = 391

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 96/311 (30%), Gaps = 39/311 (12%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           I+  +S L F   +  ++   F+  E   +           +V+         ++ ++  
Sbjct: 108 IEAHESVLSFTQVQAPIVYLPFD--EGARVTRGTVLARVDDRVYRRQTDIDRANVDVQTA 165

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++ +   N   LE+     R  L   + D      L  ++AVSQ                
Sbjct: 166 QVEANRSNVAALEHGVLSDRFDLDEKRLDFVRADTLARQSAVSQQ--------------- 210

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +            DEA L  A        D+       A   +K  + E T   
Sbjct: 211 -SRDLAQTAARQSAAALARDEALLAAA------RNDVALAVAGVAAAQAKRKLDEATLSY 263

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P  G I   +       A     +  I       ++RA V    +  ++ G  A 
Sbjct: 264 TELAAPFDGVI-AVRHAELGQLAGPGVAIFTIAELDH-VWLRAYVNEPDVGRIRLGEPAD 321

Query: 350 VRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           VR   Y     +     I  + P       + + +  +  + Y V + I +        E
Sbjct: 322 VRTDAYPSAVYR---GRISFVSPQAEFTPKTVETHEERVTQVYRVRIDIDNPT-----HE 373

Query: 405 LRNGFPAEVLF 415
           L  G PA+   
Sbjct: 374 LLPGMPADATI 384


>gi|325168858|ref|YP_004280648.1| transmembrane efflux pump [Agrobacterium sp. H13-3]
 gi|325064581|gb|ADY68270.1| putative transmembrane efflux pump [Agrobacterium sp. H13-3]
          Length = 368

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/332 (10%), Positives = 90/332 (27%), Gaps = 47/332 (14%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            S   ++ ++      +     +  V +      ++ L     + +         G++SV
Sbjct: 47  TSQAQVQAYVVGIAPEVTGRVVEVGVNDNTRVEADQILFRIDPQRYQLAVNEAEAGLASV 106

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            +S+      + +     + +      L    +   +       L +    S+   +  +
Sbjct: 107 GQSIGASTAAVDAAQAKLVQIRADRDNLGDQYARASE-------LLKNGVFSKARFDAAK 159

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
               ++   +     +       +    ++                          ++ L
Sbjct: 160 SAFDQAEASVSGAQADLTKAREQLGPSGNDN-------------------PQLRAALAGL 200

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                     T+ +P +G +   Q  +S       QP M  +      +I A      ++
Sbjct: 201 EKARLDLMHTTVRAPSSGVVTNLQL-TSGKVLPAGQPAMTFI-DVGTIWINAAFKENSLE 258

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--------------EY 386
           +V  G  A + F            A +E +   +SQ   +  T               + 
Sbjct: 259 NVVVGNRAEILFDALPGRLFP---ATVESVGFGVSQGSTDPSTGLPTMRSDSGWVKEAQR 315

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           + V L I +       +    G  A V+    
Sbjct: 316 FPVRLNIDEAQRPKGGVRY--GSQATVIIYTG 345



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 67/224 (29%), Gaps = 14/224 (6%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           H  +     RN    L+R+    +   + L   SI   +E    S+ +   +  VV I  
Sbjct: 7   HEPVTTPPPRN---PLRRIAFAVVCLALVLFVLSIF--VERRTPSTSQAQVQAYVVGIAP 61

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-------NLRCHIDTEK 114
             +G + +  V + +++     L   +       ++  +  +             +D  +
Sbjct: 62  EVTGRVVEVGVNDNTRVEADQILFRIDPQRYQLAVNEAEAGLASVGQSIGASTAAVDAAQ 121

Query: 115 SALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           + L  +    D L   +    E L +  F           F+   +SV  +         
Sbjct: 122 AKLVQIRADRDNLGDQYARASELLKNGVFSKARFDAAKSAFDQAEASVSGAQADLTKARE 181

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +  +  D     + L  L  +    +           V+   L
Sbjct: 182 QLGPSGNDNPQLRAALAGLEKARLDLMHTTVRAPSSGVVTNLQL 225


>gi|262406337|ref|ZP_06082886.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294646581|ref|ZP_06724217.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294806645|ref|ZP_06765479.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
 gi|262355040|gb|EEZ04131.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292638104|gb|EFF56486.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|294446181|gb|EFG14814.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 311

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 91/256 (35%), Gaps = 39/256 (15%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         M+S+   R DL  + +  +  + + +++   ++NL    A +Q  L+ 
Sbjct: 80  QLYLKKLQLEASMKSVENQRPDLAKQIAATKQQIVTAERERKRVENLLAAGAANQKQLDD 139

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  V     +L       +N    + E  +   ++ A                      
Sbjct: 140 WDAQVKLLERQLVAQESSLRNSTNSLTEQGNSVAIQVAQ--------------------- 178

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E    +  + SPIAGT++  +   +   A   +PL K V      Y+RA +T +Q
Sbjct: 179 ----VEDQLAKCHVQSPIAGTVLA-KYAEAGELAAIGKPLFK-VGEVDRMYLRAYITSEQ 232

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV +  Y +  +K +   +  I              N +    Y V + +
Sbjct: 233 LSQVKLGDQVTV-YADYGNSEQKAYPGEVTWISDRSEFTPKTILTKNERANLVYAVKIAV 291

Query: 394 TDLAFSDNNIELRNGF 409
                  N+  L+ G 
Sbjct: 292 ------KNDGALKIGM 301


>gi|312143114|ref|YP_003994560.1| efflux transporter, RND family, MFP subunit [Halanaerobium sp.
           'sapolanicus']
 gi|311903765|gb|ADQ14206.1| efflux transporter, RND family, MFP subunit [Halanaerobium sp.
           'sapolanicus']
          Length = 431

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 53/355 (14%), Positives = 105/355 (29%), Gaps = 84/355 (23%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    VE G  I  G  L   +D E  + +              +  K   +    K 
Sbjct: 79  GEIIDIYVEEGQNIEAGEVLAKLDDREIRNNL-----------SQAEMAKQETELAYKKA 127

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++                                S+  S    +    ++   + DLE  
Sbjct: 128 EL--------------------------------SLENSKNNLVQSRAALNEAKSDLEQ- 154

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                      +KD    K L+E++ +++    Q+E    K+   +             I
Sbjct: 155 ----------WRKDYQRDKKLYEEDVIARVKFEQKENQYLKARSRVESLEAALNIARTAI 204

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                               DLE  +       S+L       +   + +P +G I+  +
Sbjct: 205 TIA---------------ESDLEIRESQLNRAESELENARIRLDNTEVKAPFSGIILD-K 248

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                  A  SQP+  +    +   + + +    +  +  G  A + F    +++ +KF+
Sbjct: 249 ISEKGEMAASSQPIFLVSKSVEQIEVESHIGMSDLNKIAIGTEAEITFS---NLKGEKFR 305

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             I +I PI + Q+         ++  KI +      +     G  A +   A  
Sbjct: 306 TEISEISPISNPQNRTP------KIKFKIDNREQVLKD-----GMAASLKIIADK 349


>gi|300853639|ref|YP_003778623.1| secretion protein HlyD family protein [Clostridium ljungdahlii DSM
           13528]
 gi|300433754|gb|ADK13521.1| secretion protein HlyD family protein [Clostridium ljungdahlii DSM
           13528]
          Length = 322

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 89/268 (33%), Gaps = 35/268 (13%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               +V     +    +  +   +  +      + ++  S       + +K+   ++ L 
Sbjct: 85  DLQGQVDQAQAALNTANANLTNAQNITRPEQIAEAQSSVSSASQSYETVKKNYDRVQALV 144

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              A +Q +L+   + +  +  + +    +   +                 Y  ++ +  
Sbjct: 145 NAGAATQQELDSANQQLATADSQYKTAQEQLAMLEN------GPTKSSIDVYKAQVDQA- 197

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                      + L   +       I +PI+G +         +       L+ I+ +S 
Sbjct: 198 ----------QAALKTAQTALSNAIITAPISGVVNTRNVN-VGDTVSPGATLLSII-NSS 245

Query: 327 LTYIRAKVTPKQI-QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
             Y+ A   P  I   +K+G    V+     D   K+FK  I  I+  ++ +  ++    
Sbjct: 246 NLYVNAY-APLDIVSQIKEGQEVAVKVSEIPD---KQFKGRIAVINSNLNSESRDI---- 297

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
              V + +TD      + +L+ G  AE+
Sbjct: 298 --LVKVSLTD-----KDSQLKPGMFAEI 318


>gi|207723246|ref|YP_002253645.1| multidrug resistance protein a (translocase) [Ralstonia
           solanacearum MolK2]
 gi|206588444|emb|CAQ35407.1| multidrug resistance protein a (translocase) [Ralstonia
           solanacearum MolK2]
          Length = 428

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 98/295 (33%), Gaps = 28/295 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + QL+                 +     +L   + ++R++Y N     +  ++  
Sbjct: 85  AIRADDTQLVTSGQPLIELDRADARVALEQSEAALAQAVRQVRTLYSNTGAYASTLAMRE 144

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L+  ++DLT  K +    AVSQ ++   +  +  +   +     + +        L D
Sbjct: 145 SDLAKAREDLTRRKQIAGTGAVSQEEIAHAQISLQAAEAAVETAKEQLQANRV----LTD 200

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +  LE    + + +  + +    +A              + ++ + + G +   +S    
Sbjct: 201 QTTLERHPNVLQAAAKVREAYLAYA--------------RTSLPASVTGYVAK-RSVQVG 245

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--------K 361
                  PLM IVP     ++ A     Q++H++ G    +    Y              
Sbjct: 246 QRVAPGTPLMAIVPLD-QLWVDANFKEVQVRHMRVGQPVELVADVYGGSVTYHGKVVGFS 304

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                   + P  +   N ++  +   V + +      D+ + +     A+V   
Sbjct: 305 AGTGSAFSLLPAQNATGNWIKVVQRLPVRVSLDPKELKDHPLRVGLSMEAKVDIH 359



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 61/182 (33%), Gaps = 10/182 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + NVV++    +G +   + ++   +  G PL+  +  +    ++  + ++      + 
Sbjct: 68  VQGNVVQVTPQVAGTVVAIRADDTQLVTSGQPLIELDRADARVALEQSEAALAQAVRQVR 127

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           T  S      +   + E       E L     +    +   +   +   S+  +     T
Sbjct: 128 TLYSNTGAYASTLAMRESDLAKAREDLTRRKQIAGTGAVSQEEIAHAQISLQAAEAAVET 187

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
               +  NR+      LE   ++L+A     +  L   +          V++  +   +R
Sbjct: 188 AKEQLQANRVLTDQTTLERHPNVLQAAAKVREAYLAYARTSLPASVTGYVAKRSVQVGQR 247

Query: 222 IV 223
           + 
Sbjct: 248 VA 249


>gi|46580843|ref|YP_011651.1| RND family efflux transporter MFP subunit [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|120601843|ref|YP_966243.1| RND family efflux transporter MFP subunit [Desulfovibrio vulgaris
           DP4]
 gi|46450263|gb|AAS96911.1| efflux transporter, RND family, MFP subunit [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|120562072|gb|ABM27816.1| efflux transporter, RND family, MFP subunit [Desulfovibrio vulgaris
           DP4]
 gi|311234545|gb|ADP87399.1| efflux transporter, RND family, MFP subunit [Desulfovibrio vulgaris
           RCH1]
          Length = 411

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/258 (10%), Positives = 79/258 (30%), Gaps = 14/258 (5%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + +  ++          E +++ +        ++           +       +++R + 
Sbjct: 96  REQRAQLDEAEAKLRQAEAEAARVETSYPLQIREAEAQVQAARAESEYAALTMERKRKLV 155

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           +  L+ R ++ E +   R ++ +             E   + ++ ++      + L    
Sbjct: 156 EQDLDARNSLDEAQQRSRSLSNVLVAREATLDRLRNEFRTERKRTRQAAEQAKAALETAR 215

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA--KVTPKQIQHV 342
                  I SPI+G +    +            ++ ++     + +     V    +  V
Sbjct: 216 IRLSYAVIRSPISGIVSQVTA-PEGETVVAGFQVVNLITILDPSRLEMWIYVDETDVGQV 274

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           + G     R        EK F+ ++++I P    Q        YY+ ++++         
Sbjct: 275 RPGLDVEFRV---DSQPEKTFRGVVDQIYP----QPEIRDNIVYYQALVRLDPATSE--- 324

Query: 403 IELRNGFPAEVLFTAKNT 420
             LR     +      + 
Sbjct: 325 -HLRPEMTTQCRIIVASK 341


>gi|325110085|ref|YP_004271153.1| hypothetical protein Plabr_3534 [Planctomyces brasiliensis DSM
           5305]
 gi|324970353|gb|ADY61131.1| hypothetical protein Plabr_3534 [Planctomyces brasiliensis DSM
           5305]
          Length = 512

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 56/354 (15%), Positives = 121/354 (34%), Gaps = 33/354 (9%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V +G+++ +G  +L  E     + I   + S+++    +      L FL     +  +  
Sbjct: 103 VAHGAEVTEGDQILKLEVESLDEQIQDLERSLQSSGLSLRLATDELRFLKESTAMDLEQT 162

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               +   D L  Y +   +     + S   SLKM   R+         L+         
Sbjct: 163 NRTAKNAADDLEYYQTVQEE---QDLKSAELSLKMSQFRLEYAEEELKQLQQMYEADD-- 217

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+   +++ + +   +      +    + R   ++         E  +          + 
Sbjct: 218 LTEQTEEIILKRTARDVEMAKHSLEQAKLRYARQTETSFPRQKQEMIDQEARAALSKAKT 277

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS---- 307
                  L++   ++EQ + + A +  KL  L+  RE  T+ +  +G + Y Q+ +    
Sbjct: 278 VAILPVQLRKKELEVEQLELSVAKQKQKLEDLKADREMMTVTASRSGIVFYGQAKNGKWG 337

Query: 308 ----------SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
                     S      +Q ++ IV       + A V+  +   +KKG   ++R      
Sbjct: 338 EIATREKQLISGGAVGANQVILTIV-DPTKLELVASVSESEYALLKKGQIVSIRPDA--- 393

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           I+  +    ++ +DP++      L T     V LK      +     +  G  A
Sbjct: 394 IQNGRLWGSVKSVDPVVQADGKQLLT-----VELKADQETDA-----IIPGMTA 437


>gi|78066115|ref|YP_368884.1| HlyD family secretion protein [Burkholderia sp. 383]
 gi|77966860|gb|ABB08240.1| Secretion protein HlyD family [Burkholderia sp. 383]
          Length = 404

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 87/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      + +L ++ LS  + DL     + +  AVSQ
Sbjct: 96  QVALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRQSDLSKAEDDLRRRVAVAQTGAVSQ 155

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ +R      D +  + A+     +     +    
Sbjct: 156 EE------------------ISHARDAVRAAQASLDASQQQLASNRALTANTTIASHPNV 197

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        +  + +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 198 MAAAAKVRDAYLANARNVLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWVDAN 255

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 256 FKEVQLKHMRIGQPVELTADIYGSSAVYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 315

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++       + + +      +V   
Sbjct: 316 RLPVRIELDPKDLDKHPLRIGLSMQVDVDIK 346



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 55  VNGNVVQITPQVTGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      E+ L     + +  +   +  ++   +V  +      
Sbjct: 115 GLFVNDDQYRAQVALRQSDLSKAEDDLRRRVAVAQTGAVSQEEISHARDAVRAAQASLDA 174

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 175 SQQQLASNRALTAN 188


>gi|194439427|ref|ZP_03071503.1| multidrug resistance protein A [Escherichia coli 101-1]
 gi|194421603|gb|EDX37614.1| multidrug resistance protein A [Escherichia coli 101-1]
 gi|323971470|gb|EGB66705.1| efflux pump membrane protein [Escherichia coli TA007]
          Length = 394

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 102 RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 161

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 162 EELQHARYAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 215

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 216 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 261

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 262 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 319

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 320 VQRLPVRIELDQKQLEQYPLRI 341



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 67/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 36  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 88

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 89  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 148

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +   Y ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 149 RRVPLGNANLIGREELQHARYAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 208

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 209 EVRNAWLALERT 220


>gi|189426639|ref|YP_001953816.1| efflux transporter RND family, MFP subunit [Geobacter lovleyi SZ]
 gi|189422898|gb|ACD97296.1| efflux transporter, RND family, MFP subunit [Geobacter lovleyi SZ]
          Length = 404

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 66/258 (25%), Gaps = 56/258 (21%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           L ++     N L+ +      +  L+  ++ L   + L  +  V+Q+D +  +     + 
Sbjct: 93  LAQVEQARGNFLNAQANLQKAKVTLADAKRTLERNRQLISQGIVAQSDFDASQTAYDSAL 152

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             ++                                      +         L   E   
Sbjct: 153 AGIKS------------------------------------AEAGVTQYRGTLMQAETNL 176

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           +   I SP+ G ++  +S         S     L  I        I   V    I   + 
Sbjct: 177 KNSVIRSPVDGIVIS-RSIDVGQTVAASFQTPTLFSIARDLTKMQIETSVDEADISRTRL 235

Query: 345 GYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
               T     Y D     FK  + ++   PI  Q                   +   + +
Sbjct: 236 DQAVTFTVDAYPDR---SFKGRVTQVRSAPITVQNVVTYIVV-----------VQVDNKD 281

Query: 403 IELRNGFPAEVLFTAKNT 420
           + L+ G  A V       
Sbjct: 282 LHLKPGMTANVSIETGRR 299



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 56/150 (37%), Gaps = 16/150 (10%)

Query: 39  PIEISVS-----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           P+E         ++G +     V  + S  SG I+K  V+  S++ QG  +   +     
Sbjct: 35  PLEKGSVVATISATGTVNPVTTVQ-VGSQVSGTIQKLLVDYNSRVKQGQVIAEIDPALFL 93

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALD----------FLNNKYDVLEKAFESREEQLLDFLG 143
             ++  + +  N + ++   K  L            L ++  V +  F++ +      L 
Sbjct: 94  AQVEQARGNFLNAQANLQKAKVTLADAKRTLERNRQLISQGIVAQSDFDASQTAYDSALA 153

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              S  + V  Y  + +     +K + +RS
Sbjct: 154 GIKSAEAGVTQYRGTLMQAETNLKNSVIRS 183


>gi|281425454|ref|ZP_06256367.1| efflux transporter, RND family, MFP subunit [Prevotella oris F0302]
 gi|281400447|gb|EFB31278.1| efflux transporter, RND family, MFP subunit [Prevotella oris F0302]
          Length = 340

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 91/288 (31%), Gaps = 52/288 (18%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q+   + K +   + V   G           ++++ S   N   ++      +  L+   
Sbjct: 66  QVSGIVSKLYVDYNSVVKKGQVIAELDKSNLMSQLNSAKANLQQMQANLRKAQEDLAYQH 125

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +    K L+ K  VS ND                                Y  A+   +
Sbjct: 126 ANFNRYKTLYNKGLVSANDFETARL-------------------------SYQTASQSVS 160

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS- 315
           +  ++++   E+ +R            +      TI SPI G ++  +S         S 
Sbjct: 161 SVRQQVNAAQEEVKR-----------AQTNLGYATITSPIDGIVLS-KSVEEGQTVAASF 208

Query: 316 --QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               L  I        + A V    I  VK+G   T     Y D     F+  ++++   
Sbjct: 209 STPELFTIAQDLTNMQVVANVDEADIGGVKEGERVTFTVDAYPDET---FQGTVKQVRQE 265

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +  +N +     YEV++        + N++L+ G  A V       +
Sbjct: 266 ATTTNNVVT----YEVVISAP-----NANLKLKPGLTANVTIFTAERS 304



 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 58/140 (41%), Gaps = 3/140 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I+ S++++G I    +V  + +  SGI+ K  V+  S + +G  +   +       ++
Sbjct: 43  ANIQSSITATGTIEPVTSV-TVGTQVSGIVSKLYVDYNSVVKKGQVIAELDKSNLMSQLN 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K +++ ++ ++   +  L + +  ++  +  +        DF     S   +  +  +
Sbjct: 102 SAKANLQQMQANLRKAQEDLAYQHANFNRYKTLYNKGLVSANDFETARLSY--QTASQSV 159

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
           SSV + +      ++    N
Sbjct: 160 SSVRQQVNAAQEEVKRAQTN 179


>gi|261342130|ref|ZP_05969988.1| multidrug resistance protein A [Enterobacter cancerogenus ATCC
           35316]
 gi|288315462|gb|EFC54400.1| multidrug resistance protein A [Enterobacter cancerogenus ATCC
           35316]
          Length = 390

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 89/277 (32%), Gaps = 34/277 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     L   + + R + +N   L+    + +  L+  Q DL     L   N + +
Sbjct: 98  QQAFEKAQTQLASSVRQTRQLMINSKQLQASIDVQKTALAQAQSDLNRRVPLGTANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       +     E          E+           
Sbjct: 158 EELQHARDAVASAQAQLDVAIQQYNANQAMVLGTSLENQPAVKQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         ++  I+SP+ G +   +S         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALQRTKIVSPMTGYVSR-RSVQPGAQIGTTTPLMAVVPANN-LWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ H++ G TATV    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQLAHMRIGQTATVVSDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +   V +++     +D+ + +  G    V     N 
Sbjct: 316 VQRLPVRIELDAKQLADHPLRI--GLSTLVTVDTANR 350



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  +  + +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVQKGDVLVTLDPTDAQQAFEKAQTQLASSVRQTR 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L     LG  +    +   +   +V  +      
Sbjct: 117 QLMINSKQLQASIDVQKTALAQAQSDLNRRVPLGTANLIGREELQHARDAVASAQAQLDV 176

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+       LEN+ ++ +A        L + + 
Sbjct: 177 AIQQYNANQAMVLGTSLENQPAVKQAATEVRNAWLALQRT 216


>gi|172060478|ref|YP_001808130.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
 gi|171992995|gb|ACB63914.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
          Length = 405

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 87/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRQSDLSKAQDDLRRRVAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ +R      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVRAAQASVDAAQQQLASNRALTANTTIASHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        +  + +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 MAAAAKVRDAYLANARNVLPAPVTGYVAK-RSVQVGQRVSPGNPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSAVYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V ++I       + + +      +V   
Sbjct: 317 RLPVRIEIDPKELEKHPLRIGLSMQVDVNIK 347



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 14/134 (10%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQITGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L     + +  +   +  ++   +V  +      
Sbjct: 116 GLFVNDDQYRAQVALRQSDLSKAQDDLRRRVAVAQTGAVSQEEISHARDAVRAAQASVDA 175

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 176 AQQQLASNRALTAN 189


>gi|326386601|ref|ZP_08208223.1| multidrug resistance transmembrane efflux pump protein
           [Novosphingobium nitrogenifigens DSM 19370]
 gi|326208916|gb|EGD59711.1| multidrug resistance transmembrane efflux pump protein
           [Novosphingobium nitrogenifigens DSM 19370]
          Length = 372

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/375 (10%), Positives = 105/375 (28%), Gaps = 61/375 (16%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              ++ ++    SG + +  V+N   + +G  L+  + ++    +   +         + 
Sbjct: 51  VNADIAQVTPQTSGQVAQVLVDNTRIVRKGDVLVVIDPVDARIALAAAEAEYARAVRRVK 110

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              +    L                                                 ++
Sbjct: 111 QTIATGTALG-----------------------------------------------AQV 123

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                +   +  + S+ +A L+  + DLT  + L     VS  +L         +    +
Sbjct: 124 GEREADIRRMTAQVSIAQADLARARIDLTRREALAADGGVSGEELTSARNAFASA----Q 179

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            N+   +  L         A+ + A     ++    +         +KL       E+  
Sbjct: 180 GNLAAARAALAQSQAARGNASGQEAANDALVAGTTVETNPDVLAAKAKLDQARIDLERTV 239

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +PI G +   ++            L+ +VP +   Y+ A     Q+++V  G    + 
Sbjct: 240 VRAPIDGVVTQ-RTVQVGQRVNAGAVLLAVVPINDA-YVDANYKEGQLRNVHPGQPVELT 297

Query: 352 FPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
              Y D                    + P  +   N ++  +     + +     + + +
Sbjct: 298 SDLYGDKVVYHGHVVGFSGGTGSALAVIPAQNATGNWIKVVQRLPTRIALDRAELTAHPL 357

Query: 404 ELRNGFPAEVLFTAK 418
            +     A +    K
Sbjct: 358 RIGLSMTATIDTRGK 372


>gi|315224666|ref|ZP_07866489.1| efflux transporter [Capnocytophaga ochracea F0287]
 gi|314945294|gb|EFS97320.1| efflux transporter [Capnocytophaga ochracea F0287]
          Length = 409

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 73/220 (33%), Gaps = 19/220 (8%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEI 262
            +K   +++ D    + +V  +T   +  ++E     ++        N +  +    ++ 
Sbjct: 82  VKKGQLLAELDKTNLQEMVVNATANYQSALNELNYYRQNYERQQKMYNAQVISKSDYEQA 141

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLM 319
                  +   A  ++ L   +       I SPI G I+  +          S     L 
Sbjct: 142 LYQFNNAKANVAQRLTTLNQAKTNLGYANIYSPINGIILSKEV-EEGQTVAASMSAPTLF 200

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           KI    K   + A V    I  VK G   +     Y      +F   + ++  +     +
Sbjct: 201 KIAKDIKRMQVEADVDEADIGQVKVGQRVSFTVDAYPQE---EFSGKVTQV-RLSPTTTS 256

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           N+ T   Y VI++       + + +L+ G  A +      
Sbjct: 257 NVVT---YTVIVE-----AENPDEKLKPGLTATIAIYTNE 288



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 66/175 (37%), Gaps = 1/175 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+++G +   D V E+ +  SG++ K  V+  SQ+ +G  L   +     +++     + 
Sbjct: 49  VTATGSVQPVDEV-EVGTQVSGLVSKIYVDYNSQVKKGQLLAELDKTNLQEMVVNATANY 107

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           ++    ++  +   +     Y+    +    E+ L  F     +   ++     +     
Sbjct: 108 QSALNELNYYRQNYERQQKMYNAQVISKSDYEQALYQFNNAKANVAQRLTTLNQAKTNLG 167

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                + +  I L++   E ++        +  K    +K +  +  V + D+ Q
Sbjct: 168 YANIYSPINGIILSKEVEEGQTVAASMSAPTLFKIAKDIKRMQVEADVDEADIGQ 222


>gi|255691521|ref|ZP_05415196.1| putative ABC transport system, lipoprotein [Bacteroides finegoldii
           DSM 17565]
 gi|260622912|gb|EEX45783.1| putative ABC transport system, lipoprotein [Bacteroides finegoldii
           DSM 17565]
          Length = 311

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 91/256 (35%), Gaps = 39/256 (15%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         M+S+   R DL  + +  +  + + +++   ++NL    A +Q  L+ 
Sbjct: 80  QLYLKKLQLEASMKSVENQRPDLAKQIAATKQQIVTAERERKRVENLLAAGAANQKQLDD 139

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  V     +L       +N    + E  +   ++ A                      
Sbjct: 140 WDAQVKLLERQLVAQESSLRNSTNSLTEQGNSVAIQVAQ--------------------- 178

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E    +  + SPIAGT++  +   +   A   +PL K V      Y+RA +T +Q
Sbjct: 179 ----VEDQLAKCHVQSPIAGTVLA-KYAEAGELAAIGKPLFK-VGEVDRMYLRAYITSEQ 232

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV +  Y +  +K +   +  I              N +    Y V + +
Sbjct: 233 LSKVKLGDQVTV-YADYGNSEQKAYPGEVTWISDRSEFTPKTILTKNERANLVYAVKIAV 291

Query: 394 TDLAFSDNNIELRNGF 409
                  N+  L+ G 
Sbjct: 292 ------KNDGALKIGM 301


>gi|198276961|ref|ZP_03209492.1| hypothetical protein BACPLE_03166 [Bacteroides plebeius DSM 17135]
 gi|198270486|gb|EDY94756.1| hypothetical protein BACPLE_03166 [Bacteroides plebeius DSM 17135]
          Length = 296

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 97/256 (37%), Gaps = 39/256 (15%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y   +    +M+S+   R D+  + +  +A +++ Q++   ++NL +  A ++  L+ 
Sbjct: 69  QLYLKKRQLEAQMKSVESQRPDIHRQIAATKAQIATAQRERNRVENLLKAQAANRKQLDD 128

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  +     +L   +    N    + E      ++ A                      
Sbjct: 129 WDSQLAVLNRQLEAQLSSLGNTTASLTEQSSSVAIQVAQ--------------------- 167

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E    +  I  PI GTI+  +    S  A   +PL KI    +  ++RA +T  Q
Sbjct: 168 ----VEDQLNKCHITVPINGTILA-KYAEPSELATVGKPLFKIA-DMEHIFLRAYLTSSQ 221

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           ++ VK G   TV F  + + + + +   I  I             N+ +  + Y V + +
Sbjct: 222 LESVKLGNEVTV-FADFGNAQLRNYPGKIVWISEEAEFTPKTILTNDERANQVYAVKIAV 280

Query: 394 TDLAFSDNNIELRNGF 409
                 +N+  ++ G 
Sbjct: 281 ------ENDGHIKLGM 290


>gi|161524924|ref|YP_001579936.1| efflux pump membrane protein [Burkholderia multivorans ATCC 17616]
 gi|189350326|ref|YP_001945954.1| multidrug resistance protein A [Burkholderia multivorans ATCC
           17616]
 gi|160342353|gb|ABX15439.1| efflux pump membrane protein [Burkholderia multivorans ATCC 17616]
 gi|189334348|dbj|BAG43418.1| multidrug resistance protein A [Burkholderia multivorans ATCC
           17616]
          Length = 407

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 88/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      + +L ++ LS  Q DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ +R      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVRAAQASLDAAQQQLASNRALTANTTIASHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 LAAAAKVRDAYLANARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSVVYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++       + + +      +V   
Sbjct: 317 RLPVRIELDPKDLDKHPLRIGLSMQVDVNIK 347



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      ++ L   L   +  +   +  ++   +V  +      
Sbjct: 116 GLFVNDDQYRAQVALRQSDLSKAQDDLRRRLAVAQTGAVSQEEISHARDAVRAAQASLDA 175

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 176 AQQQLASNRALTAN 189


>gi|309791394|ref|ZP_07685902.1| secretion protein HlyD family protein [Oscillochloris trichoides
           DG6]
 gi|308226565|gb|EFO80285.1| secretion protein HlyD family protein [Oscillochloris trichoides
           DG6]
          Length = 517

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 52/466 (11%), Positives = 118/466 (25%), Gaps = 104/466 (22%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I + V ++GE+     + ++     G + +  VE GS + +G  L   +  E    +   
Sbjct: 66  ISVGVVATGEV-AARQIADLGFRVPGTVDQVLVEEGSVVTEGQELARLDLRELDLQVAQA 124

Query: 100 KVSIKNLRCHIDTEKSAL--------------------DFLNNKYDVLEKAFESREEQLL 139
           +  + + + +                                   D    A E+  +Q L
Sbjct: 125 EAQVASAKANYQRVIDGATPQQIAAARAQVAQASAGLRQTQGAVTDQDIAAAEANVQQAL 184

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR-----SIYLNRLDLENKSSLLRALLSS 194
                  +           +  +  +  L   R          RL +E+ ++ LR    +
Sbjct: 185 ARQADILAGPKATDMQQAQAAVQQAQANLDIQRTNLSAGKERARLQMESAANALRNAQDA 244

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS---------------TLELRENIHEQKN 239
           + +     + L +K       L  QE    +                   ++  I     
Sbjct: 245 YSRIYWSNRELEDKGRDVPQALKDQEAQARRMVDDAGIAFENAKLAYEQSIQNEIDGIAA 304

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT------------- 286
               +++              +               ++KL   ++              
Sbjct: 305 AEGQVSQAQATLQKLIDGATDDQRAAAAAAVAQAQANLNKLKGEQRAGQVAQAQAGLAAA 364

Query: 287 ------------------------------------REQKTILSPIAGTIVYNQSFSSSN 310
                                               R++ ++++P AG +          
Sbjct: 365 QANLSQLTADPTEATVAGALAQVQAAEAARDAAKLNRDKASLVAPFAGIVSIVNIDPGDL 424

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                  ++++V       I   ++   +  V +G TAT+            F   ++ +
Sbjct: 425 ATGTGMMVIQVV-DVSELRIEVNISDTDVAKVHEGQTATIEVDAIPGQT---FTGKVDYV 480

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            P  +           Y V + +           LR G  A V   
Sbjct: 481 APTATVSGTIRT----YAVRIVLDSQE------GLRAGMSARVTIK 516


>gi|332204067|gb|EGJ18132.1| bacteriocin secretion accessory family protein [Streptococcus
           pneumoniae GA47901]
          Length = 449

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 51/439 (11%), Positives = 146/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV--------SQND---------LNQQERIVYKSTLELRE 232
               + +  +    +L  +N          SQ +         + Q E  + +    L  
Sbjct: 189 RDYQTAKSAMETGASLASQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 233 NIHEQKN---MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              +         + + L  +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P       T + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKTKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|225572791|ref|ZP_03781546.1| hypothetical protein RUMHYD_00982 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039848|gb|EEG50094.1| hypothetical protein RUMHYD_00982 [Blautia hydrogenotrophica DSM
           10507]
          Length = 644

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 87/281 (30%), Gaps = 6/281 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +  K+  +  L      E+S +D +  + + +E   E  +EQ  DF  K  +  +
Sbjct: 260 QKKAELQGKQEELNRL-VQAGAEQSEIDRMQTEINQMETELEGIQEQ-ADFAQKELADAA 317

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +      +  +  +      +     ++ EN  +      + +   L   +       
Sbjct: 318 ESYGQAQMELSSAESVYTAAEAAYERYGMEYENAEAAFEQAKAQYSDILASQEFATRDQT 377

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            + N+ +Q                 E +N+     +   E +++ A+     +   E   
Sbjct: 378 AANNEYSQAMSEYSTEKSMYESMKQEVENLEIQTKQAKKEMDMKSASLQNSFTATKESVL 437

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +   E+ K T   +  ++  I+S   G +         +       ++KI        +
Sbjct: 438 DSLETELKKCT---ENLKKYEIVSSTEGEVQEL-VADMGSIVGAGSEIIKIKQKEDSQEV 493

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              +   + + VK G    V             +  +  + 
Sbjct: 494 ICYIPVSEGKKVKAGMEVMVYPTTVNTQEYGHMRGTVRAVS 534



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 99/306 (32%), Gaps = 27/306 (8%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
            P S        ++ ++  + W I   + + V ++G  L++D    + S  SG++ K  V
Sbjct: 26  TPPSFWIALAGGVLIVVVALLWGIFGKLPVKVETNGIYLSDDGTRGVYSEVSGVVTKMNV 85

Query: 73  ENGSQILQGTPLLTF---EDIETTDLIDLKKVSIKNLRCHIDTEKSALD-----FLNNKY 124
           E+G  + +   +      E  +    +  +  S++++      +K+  D      + +++
Sbjct: 86  EDGDYVKKDQVVAYIGGGELAQEQKNLSKRISSVQDVTLKSKGDKATSDNKSLLDIKSEF 145

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFN--YGISSVYRSLKMKLTRM-RSIYLNRLDL 181
             L+  +E  +E       +  S  +KV         +       +        L   + 
Sbjct: 146 TPLQATYEQSKETFEKKKKELESQKNKVSEKKAEADKLKEQYYDSIGGAGAQEQLEYTEA 205

Query: 182 ENKSSLLRALLSSHQKDLTMMK----------NLFEKN-AVSQNDLNQQERIVYKSTLEL 230
           +   S  +    S        +          +L E+N  + Q      E  + +   EL
Sbjct: 206 QADLSSAKQYYESAYSQYEQARTQKDAADQSYSLTEQNYYMVQTSTQAIETRLNQKKAEL 265

Query: 231 RENIHEQKNMLRHINEL--YDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEK 285
           +    E   +++   E    D    E      E+    EQ    Q+  AD        + 
Sbjct: 266 QGKQEELNRLVQAGAEQSEIDRMQTEINQMETELEGIQEQADFAQKELADAAESYGQAQM 325

Query: 286 TREQKT 291
                 
Sbjct: 326 ELSSAE 331


>gi|257142612|ref|ZP_05590874.1| HlyD family secretion protein [Burkholderia thailandensis E264]
          Length = 464

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 96/311 (30%), Gaps = 39/311 (12%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           I+  +S L F   +  ++   F+  E   +           +V+         ++ ++  
Sbjct: 181 IEAHESVLSFTQVQAPIVYLPFD--EGARVTRGTVLARVDDRVYRRQTDIDRANVDVQTA 238

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++ +   N   LE+     R  L   + D      L  ++AVSQ                
Sbjct: 239 QVEANRSNVAALEHGVLSDRFDLDEKRLDFVRADTLARQSAVSQQ--------------- 283

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +            DEA L  A        D+       A   +K  + E T   
Sbjct: 284 -SRDLAQTAARQSAAALARDEALLAAA------RNDVALAVAGVAAAQAKRKLDEATLSY 336

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P  G I   +       A     +  I       ++RA V    +  ++ G  A 
Sbjct: 337 TELAAPFDGVI-AVRHAELGQLAGPGVAIFTIAELDH-VWLRAYVNEPDVGRIRLGEPAD 394

Query: 350 VRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           VR   Y     +     I  + P       + + +  +  + Y V + I +        E
Sbjct: 395 VRTDAYPSAVYR---GRISFVSPQAEFTPKTVETHEERVTQVYRVRIDIDNPT-----HE 446

Query: 405 LRNGFPAEVLF 415
           L  G PA+   
Sbjct: 447 LLPGMPADATI 457


>gi|327394681|dbj|BAK12103.1| multidrug resistance protein A EmrA [Pantoea ananatis AJ13355]
          Length = 342

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 85/302 (28%), Gaps = 22/302 (7%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              DV +    +  E+L     + +    +     +      L     ++          
Sbjct: 58  AHIDVKDNQQVAVGERLATLDDRDYRVALESAEADLQVSEAKLLSSQAQLEQQQSVIAQQ 117

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +   +  +A      +       L++   V+ ++  +       +T  +R++       +
Sbjct: 118 KASVAASQATAQYAGQSAERYNRLYKSGTVAADEQQKASSAQRSATATVRQSEAALAAAI 177

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           + +  L                  +  +Q   A   + +           I++P+AG + 
Sbjct: 178 KQVGVL---------------QAAVRSSQADVAAAKANVDQARLNLSYTRIVAPVAGMV- 221

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIRE 360
             ++     +      L+ +VP  +       +  +    V+ G    ++       +  
Sbjct: 222 GQRTVRLGAWVSAGTRLLAVVPLQQTYITANYLETQLKD-VRPGQPVRIKVDALPDQVFT 280

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVLFT 416
               +I        S    +  T  Y +++ ++      D        LR G  A     
Sbjct: 281 GHVDSIAPATGATFSAISPDNATGNYTKIVQRLPVKIVLDKGQPNLAQLRVGMSAVPEIN 340

Query: 417 AK 418
            +
Sbjct: 341 TQ 342



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 58/161 (36%), Gaps = 2/161 (1%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            +    SG +    V++  Q+  G  L T +D +    ++  +  ++     + + ++ L
Sbjct: 48  IVAPKVSGYVAHIDVKDNQQVAVGERLATLDDRDYRVALESAEADLQVSEAKLLSSQAQL 107

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +   +     +KA  +  +    + G+     ++++  G  +     K    +  +    
Sbjct: 108 EQQQSVI-AQQKASVAASQATAQYAGQSAERYNRLYKSGTVAADEQQKASSAQRSATATV 166

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLN 217
           R      ++ ++ +        +   ++    A V Q  LN
Sbjct: 167 RQSEAALAAAIKQVGVLQAAVRSSQADVAAAKANVDQARLN 207


>gi|332288162|ref|YP_004419014.1| multidrug resistance protein MdtN, membrane fusion component
           [Gallibacterium anatis UMN179]
 gi|330431058|gb|AEC16117.1| multidrug resistance protein MdtN, membrane fusion component
           [Gallibacterium anatis UMN179]
          Length = 388

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 59/437 (13%), Positives = 134/437 (30%), Gaps = 115/437 (26%)

Query: 1   MHHFMWKNLKRNHPASLKRM---TLLSIIGIIGLITWSIL----LPIEISVSSSGEILNE 53
           M     KN  RN+    + +    LL II +   + W          + +  +       
Sbjct: 4   MSEQEKKNAVRNNIRRKRLVSFFILLLIISVASFLYWLFFVKDFTETDDAYVA------- 56

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            NV+++ S  SG + K   E+   + +G  L+  ++ +    +   K ++          
Sbjct: 57  GNVIQVSSQVSGSVAKVNFESTDLVKKGDVLVELDNSDAKLALSQAKHTL---------- 106

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                           A   R+   L F  K  ++        +    + L  +    ++
Sbjct: 107 ----------------ADTVRKTTQLTFTEKQLTSLLAAKQIALKQAEQDLSRRQGLNKT 150

Query: 174 IYLNRLDLE---NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             +++ D +   +  ++ ++ L++ Q+ L   K L                        L
Sbjct: 151 GAVSKEDYQHAVDAVTMAKSDLNATQEQLNATKALL-----------------------L 187

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              I EQ  +++  + +                                        ++ 
Sbjct: 188 NTPIAEQPAVIQAADNVRQ---------------------------------AWLNLQRT 214

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            ++SP  G I   +S       +   PL+ +VP +   ++ A     Q+++++ G   ++
Sbjct: 215 KVISPATGYIAK-RSVQVGESIKAGSPLLAVVPLN-QIWLDANFKETQLKNIRIGQPVSI 272

Query: 351 RFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSD 400
            F  Y D    +F   +  ID          P  +   N ++  +   V + +       
Sbjct: 273 VFDLYGDDI--EFDGTVTGIDAGTGSAFSLLPAQNATGNWIKVVQRLPVRIALDPEQIQK 330

Query: 401 NNIELRNGFPAEVLFTA 417
             + +  G  A      
Sbjct: 331 YPLRI--GLSATAEVNT 345


>gi|258542074|ref|YP_003187507.1| multidrug ABC transporter [Acetobacter pasteurianus IFO 3283-01]
 gi|256633152|dbj|BAH99127.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636209|dbj|BAI02178.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639264|dbj|BAI05226.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642318|dbj|BAI08273.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645373|dbj|BAI11321.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648428|dbj|BAI14369.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651481|dbj|BAI17415.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654472|dbj|BAI20399.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 401

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 52/413 (12%), Positives = 127/413 (30%), Gaps = 81/413 (19%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSIL---LPIEISVSSSGEILNEDNVVEIKSPF 63
           +  K N    +    +++++ +   + W +    +  + + ++          + I    
Sbjct: 32  EKKKENPRRKIILTGVIAVLAVGAGVYWFMTRNEVETDDAFTA-------GRAITIAPHV 84

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V +   + +G  L   +  +     D     +++        K+A D ++  
Sbjct: 85  SGYVTELLVNDNQFVRKGQLLARIDPRDWKAARDQAAAQVES----AQASKNASDMMHM- 139

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                         +L+F GK      ++                               
Sbjct: 140 ------------VAMLEFPGKLLQAKGQLE----------------------------AA 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K+   +A     ++ +       E+ A SQ D++     +  +       I  Q  +   
Sbjct: 160 KAQEFKAQTDFRRQHV------VERAATSQQDIDSARAALDAAKA---RVIAAQGAV--- 207

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                 +  +     ++  +  + Q +       ++L       E   I +P  G I   
Sbjct: 208 ------QMAMPVQPNIQNAAIQISQEEAAVKTAQARLETANLNLEWTEIRAPHDGWISQ- 260

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKK 362
           ++    NY QQ Q ++ IV      ++ A     QI  +K G    ++   Y  ++    
Sbjct: 261 RNLEQGNYVQQGQNILSIV--EPEVWVVANYKETQITRMKPGQKVDIKVDAYPSLKVHGH 318

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPA 411
             ++ +      S       T  Y +++ ++      D+ +     L  G   
Sbjct: 319 IDSLQKGTGAQFSAFPPENATGNYVKIVQRVPVKILIDDGLDPNQPLALGMSV 371


>gi|327541946|gb|EGF28450.1| efflux transporter, RND family, MFP subunit [Rhodopirellula baltica
           WH47]
          Length = 428

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/343 (11%), Positives = 109/343 (31%), Gaps = 35/343 (10%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFESREEQLLDFL 142
           ++    E T             R  + ++ S     F  +  + +E      +  + +  
Sbjct: 28  VSVTPTEVTRTSVQPATVHAYYRAELRSQASGYVESFTADIGEYVESGTVLAKISVPERK 87

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRM--RSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            +     +K+            +++L +   +S        +++   + A +++   +  
Sbjct: 88  QQRRVIEAKIRRSESQEKQAESQVELAQASKKSAEAKLAQAKSEVDAVEASVAAATAEFN 147

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             ++L  + ++ QN +  + R        ++ +    +           +A++E A+   
Sbjct: 148 RTEDLVSRGSL-QNRMLDEAR--------MKRDSESARKQAVQSAVASAQADVEVASASV 198

Query: 261 E-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ----- 314
           E    DLE  +        +L  L+   +   I +P +G I   ++    +  +      
Sbjct: 199 ESARADLETARAETDVVRRELDELDAWIDYAEIKAPFSGIITE-RNIEPGDLVRAANEVG 257

Query: 315 -SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             +PL  I        ++  V       V  G   ++ FP +A   E    A + +    
Sbjct: 258 LGKPLFVIS-QIDRVRVQIPVPENHAPLVSPGDEVSLTFPSFAS--EPPITAQVTRRSGS 314

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +  Q   +             ++   + + +L  G   +    
Sbjct: 315 LDAQTRTMMV-----------EVEMENPDGKLIPGMFGQATIQ 346


>gi|269123239|ref|YP_003305816.1| Multidrug resistance efflux pump-like protein [Streptobacillus
           moniliformis DSM 12112]
 gi|268314565|gb|ACZ00939.1| Multidrug resistance efflux pump-like protein [Streptobacillus
           moniliformis DSM 12112]
          Length = 361

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 59/396 (14%), Positives = 131/396 (33%), Gaps = 88/396 (22%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            IE+++   G I +  N+  +K+   G +    +++G  + +G  L   ++        L
Sbjct: 48  EIELNIKGIGVIESNSNISIVKNIIPGKVSSNYMKDGLYVKKGQVLFELDN-------HL 100

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             +  +N+   +D  K  L+++                     L       S + NY + 
Sbjct: 101 HVLKYENMIKELDENKKFLNYI---------------------LLSSIDINSLILNYKL- 138

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                                 L+ K  + +      +K++   + ++    +S+ ++  
Sbjct: 139 ------------------ELEQLKFKIEINKIEREKIEKEIENSEEIYSIGGISKKEVLN 180

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            ++   K        I  +K +   I E       E +N +K++  +LE+          
Sbjct: 181 LKKEYLKI-------ILNEKKLFTEIAEFKFLKQKEVSNKIKKLELELEK---------- 223

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               ++   +   I + I G +   +  +  +Y    + L KI+P      ++  +  + 
Sbjct: 224 ----MKNIIDNNKIFASIDGELELEKYINVGDYIGS-ENLGKIIPKDNRYKVKLYINSED 278

Query: 339 IQHVKKGYTATVRFPHYADIREKKFK----AIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           I  +K G         Y    EK  +      IE I         N+    YY +   I 
Sbjct: 279 INKIKIGNHVK-----YFLKDEKGVEYDLIGKIEYIS----NTPVNMNNNIYYYLYSTIE 329

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
               ++ + +L  G   E        ++   I+  I
Sbjct: 330 ----NEKSFKL--GLNVEFSILYDKKSIFNYILELI 359


>gi|145632276|ref|ZP_01788011.1| multidrug resistance protein A [Haemophilus influenzae 3655]
 gi|145634066|ref|ZP_01789777.1| multidrug resistance protein A [Haemophilus influenzae PittAA]
 gi|229844046|ref|ZP_04464187.1| multidrug resistance protein A [Haemophilus influenzae 6P18H1]
 gi|144987183|gb|EDJ93713.1| multidrug resistance protein A [Haemophilus influenzae 3655]
 gi|145268510|gb|EDK08503.1| multidrug resistance protein A [Haemophilus influenzae PittAA]
 gi|229813040|gb|EEP48728.1| multidrug resistance protein A [Haemophilus influenzae 6P18H1]
          Length = 390

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 96/292 (32%), Gaps = 37/292 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +   T +K+      S   +L   + ++  +      L++        L+  Q +L
Sbjct: 87  DILVELDDTNAKLSFEQAKS---NLANAVRQVEQLGFTVQQLQSAVHANEISLAQAQGNL 143

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L +  A+ +      +  V  +   L  + ++       ++ +      +  N  
Sbjct: 144 ARRVQLEKMGAIDKESFQHAKEAVELAKANLNASKNQLAANQALLSNVPLREQPQIQNA- 202

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                            MS L       ++  I SPI G +                 LM
Sbjct: 203 -----------------MSSLKQAWLNLQRTKIRSPIDGYVARRNV-QVGQAVSVGGALM 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +V  ++  ++ A     Q+ +++ G    + F  Y   + K+F  +I  I+        
Sbjct: 245 AVV-SNEQMWLEANFKETQLTNMRIGQPVKIHFDLYG--KNKEFDGVINGIEMGTGNAFS 301

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             P  +   N ++  +   V +K+    F++  + +  G  A       +++
Sbjct: 302 LLPSQNATGNWIKVVQRVPVRIKLDPQQFTETPLRI--GLSATAKVRISDSS 351



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 59/175 (33%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V + S  +G + K   +N  ++  G  L+  +D       +  K ++ N    ++
Sbjct: 57  VGGNQVMVSSQVAGNVAKINADNMDKVHAGDILVELDDTNAKLSFEQAKSNLANAVRQVE 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                +  L +     E +    +  L     L K  +   + F +   +V  +      
Sbjct: 117 QLGFTVQQLQSAVHANEISLAQAQGNLARRVQLEKMGAIDKESFQHAKEAVELAKANLNA 176

Query: 170 RMRSIYLNR-----LDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
               +  N+     + L  +  +  A+ S  Q  L + +          V++ ++
Sbjct: 177 SKNQLAANQALLSNVPLREQPQIQNAMSSLKQAWLNLQRTKIRSPIDGYVARRNV 231


>gi|307296069|ref|ZP_07575900.1| secretion protein HlyD family protein [Sphingobium chlorophenolicum
           L-1]
 gi|306878240|gb|EFN09462.1| secretion protein HlyD family protein [Sphingobium chlorophenolicum
           L-1]
          Length = 407

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 55/423 (13%), Positives = 121/423 (28%), Gaps = 74/423 (17%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLIT--WSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           +   R  P   +      +  +  L    W    P   S     +     +   +     
Sbjct: 49  EAPARRMPRRSRASIAFGVAVVAALGGIYWITARPTSESTD---DAYVGADATTVAPKVR 105

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++++  V +   +  GTPL+  +  E T      +  + +   ++   ++AL  L    
Sbjct: 106 GLVEQVLVRDNQAVRAGTPLVRIDPEEFTARTASAQADLADADANVAAARAALVSL---- 161

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                 S   ++ +  I++   +++  L        +R   E  
Sbjct: 162 ----------------------SAEERLASANIAARGTTIRSSLAEAERADADRRRYEA- 198

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                               L    AV++ D       +Y++T         +      +
Sbjct: 199 --------------------LVATGAVARRD-----ADLYRTTAIGAAQTAVKAQAELGV 233

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +   +     +     +   L +         + L +  +      I +PI G +V N+
Sbjct: 234 AQREADVT---SARRATLQAALAKAVAQRQRAAAALDLARQDLGHALIRAPIDG-VVGNR 289

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                +Y Q    L+ +VP +   Y+ A     Q + ++ G   TV             K
Sbjct: 290 QARVGDYVQPGSRLLTLVPMN-ALYVTANFKETQTRQMRVGQAVTVHVDA----TGGSIK 344

Query: 365 AIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             ++ + P        +  +      T+    V +++   A       LR G        
Sbjct: 345 GHVDSLAPGSGSTFALLPFEPGTGNFTKIVQRVPVRVRLDAGQAEVAALRPGLSVTAKVH 404

Query: 417 AKN 419
              
Sbjct: 405 LTE 407


>gi|302038033|ref|YP_003798355.1| hypothetical protein NIDE2724 [Candidatus Nitrospira defluvii]
 gi|300606097|emb|CBK42430.1| conserved protein of unknown function, contains GAF domain
           [Candidatus Nitrospira defluvii]
          Length = 488

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 15/205 (7%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
               L   ++   Q   L+ +NE    A  +     +  +   E          ++L + 
Sbjct: 281 AGQVLATLQDRDLQLERLKRLNEREQLAKEQRQALAERNAPKAEILSAQLRQVQAQLDLA 340

Query: 284 EKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                +  I++P AG +V  + S       ++ + L ++ P      +  +V  + I HV
Sbjct: 341 ADKLSRTQIVAPFAGVVVSGDLSQQLDAPVEEGKVLFEVAPLDTYRIV-LQVDERDIGHV 399

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             G +  +R               + KI P+ + Q+     + ++ V     +  F    
Sbjct: 400 AVGQSGDLRLSALPQE---LLPFEVAKITPVSTAQE----GRNFFRV-----EGRFLTKP 447

Query: 403 IELRNGFPAEVLFTAKNTTLAQEII 427
            +LR         T     L   I 
Sbjct: 448 SQLRPAMEGVGKITIDRR-LLSWIW 471



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 57/169 (33%), Gaps = 9/169 (5%)

Query: 6   WKNLKRNHPASLKRMTL---LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS- 61
           W++++R+    +    L   LS++ I  L  W   L        + + + E  V  + + 
Sbjct: 205 WESVRRHIGTVIGAGHLGVKLSLLLIAALGAW--FLTSASEFRVTSKAVLEGEVQRVAAA 262

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           PF G I       G  +  G  L T +D    DL   +   +         ++ AL   N
Sbjct: 263 PFQGYIHTAPARAGDVVKAGQVLATLQD---RDLQLERLKRLNEREQLAKEQRQALAERN 319

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                +  A   + +  LD      S    V  +    V   L  +L  
Sbjct: 320 APKAEILSAQLRQVQAQLDLAADKLSRTQIVAPFAGVVVSGDLSQQLDA 368


>gi|282896131|ref|ZP_06304157.1| Secretion protein HlyD [Raphidiopsis brookii D9]
 gi|281199049|gb|EFA73924.1| Secretion protein HlyD [Raphidiopsis brookii D9]
          Length = 454

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 89/262 (33%), Gaps = 38/262 (14%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +   G+      L  + + +  +     ++E +   +R  L   + D    + L ++ A+
Sbjct: 135 LLKTGLEQQEAELANRESEVERVRAQVKNIEAEVEKVRLELMQAKSDSDRQQKLLQEGAI 194

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           SQ    Q    V      L+  I +Q+   + +                         Q 
Sbjct: 195 SQQAAQQALTRVRTYQQILKATIEKQRTEKKAVAA----------------------AQN 232

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               + + +    +      ++SPI G +   +     N  Q    ++KI   S++  + 
Sbjct: 233 RVLAQRAVVKAARERLSYSDLISPITGVVTE-KITEPGNLLQTGNEVIKIADLSQIKVV- 290

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            KV+  ++  V+ G +  V    + D +       IE+I P+                 +
Sbjct: 291 VKVSELELGKVEIGKSVGVNLDAFPDEK---IMGRIERISPVADST-----------ARV 336

Query: 392 KITDLAFSDNNIELRNGFPAEV 413
              ++   ++  ++R+G  A V
Sbjct: 337 VPVEIVIPNSQGKIRSGMLARV 358



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 71/171 (41%), Gaps = 6/171 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +   +  +G  + +  ++ ++S   G +    +E G ++ +G  +   +DI    
Sbjct: 80  ARTGSLNEELIYTGSTVPK-KIISVRSQVEGRLIGLDLEIGDKVSKGQRVGRLDDILLKT 138

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNN-----KYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++ ++  + N    ++  ++ +  +       + ++++   +S  +Q L   G      
Sbjct: 139 GLEQQEAELANRESEVERVRAQVKNIEAEVEKVRLELMQAKSDSDRQQKLLQEGAISQQA 198

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
           ++     + +  + LK  + + R+        +N+    RA++ + ++ L+
Sbjct: 199 AQQALTRVRTYQQILKATIEKQRTEKKAVAAAQNRVLAQRAVVKAARERLS 249


>gi|46445762|ref|YP_007127.1| multidrug resistance protein, emrA [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46399403|emb|CAF22852.1| probable multidrug resistance protein, emrA [Candidatus
           Protochlamydia amoebophila UWE25]
          Length = 399

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 98/324 (30%), Gaps = 30/324 (9%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           L +       A  +     +            ++          L + +  ++ +Y    
Sbjct: 70  LMSPEQGTITAIYADNTDFVKQGQLLIELDPTLYQLAFEQAQVELALAVREVQQLYETVQ 129

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             +    L +A L   Q+D     +L    A+S  DLN  +  +  +      + HE  +
Sbjct: 130 QKKAALELKQADLKRAQEDFESRNSLRNTEAISIEDLNHAQANLTVAQAATNLSKHELNS 189

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            +  I     E +    N  KEI+                L       ++  IL+P++G 
Sbjct: 190 AIAAIGSTSLENHPNIQN--KEIA----------------LKQTYVNLKRCKILAPVSGF 231

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI- 358
           I   +      +   ++ L+ I+P     +I A     +++ ++ G   TV+   Y    
Sbjct: 232 ISQRKI-QVGEWVSTTRSLLSIIPLD-QIWIDANFKETELRDIRIGQPVTVKSDMYGSSV 289

Query: 359 -----REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                              I  Q       +    V ++I+  +       L  G    V
Sbjct: 290 LYHGKVLGVLAGTGSVFSLIPPQNATGNWIKIVQRVPVRISLDSNELRQFPLFLGLSTYV 349

Query: 414 LFTA----KNTTLAQEIIHPITDN 433
           +        +   +  + +PI   
Sbjct: 350 VVDTKNQLGDRLASNPVYNPILTT 373



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 52/159 (32%), Gaps = 7/159 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIK 104
              N+V + SP  G I     +N   + QG  L+  +         +    + L    ++
Sbjct: 63  VNGNIVNLMSPEQGTITAIYADNTDFVKQGQLLIELDPTLYQLAFEQAQVELALAVREVQ 122

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L   +  +K+AL+         ++ FESR                   N  ++    +L
Sbjct: 123 QLYETVQQKKAALELKQADLKRAQEDFESRNSLRNTEAISIEDLNHAQANLTVAQAATNL 182

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                      +    LEN  ++    ++  Q  + + +
Sbjct: 183 SKHELNSAIAAIGSTSLENHPNIQNKEIALKQTYVNLKR 221


>gi|296157925|ref|ZP_06840758.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
 gi|295891693|gb|EFG71478.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
          Length = 312

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/330 (12%), Positives = 92/330 (27%), Gaps = 80/330 (24%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             + +VV + S   G I    V     + +G  L   + +  +       +++   +  +
Sbjct: 8   TIDADVVHVASVVGGRIVDIPVAENMHVAKGDLLFQIDPVPYS-------LTVAQTQADL 60

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              ++AL                      D   +  ST           V R+       
Sbjct: 61  SVAQAAL----------------------DTQRRVLSTQRSTATISADQVQRA------- 91

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
                             +A L   ++ +  +  L  K  V     +Q +   + +T  L
Sbjct: 92  ------------------KANLGLAERTVERLGPLASKGYVPAQQFDQAQTARHDATTSL 133

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           ++   +Q   ++ I+                        + T     + L I        
Sbjct: 134 QQAREQQTAAVQAIDTEAG-------------------AEATVRARQAALDIARHALNDT 174

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           T+ +   G +V     +       +Q L  +V +    ++ A      +  +  G     
Sbjct: 175 TVRATHGGRVVGLSVLT-GEIVAPAQTLFTLV-NDDEWFVVANFRETDLHAIAVGDCV-- 230

Query: 351 RFPHYADI-REKKFKAIIEKIDPIISQQDN 379
               ++ I R +  K  ++ I   +   D 
Sbjct: 231 --TAFSMIDRARPIKGTVQGIGAGVLDTDR 258


>gi|261378370|ref|ZP_05982943.1| multidrug resistance protein A [Neisseria cinerea ATCC 14685]
 gi|269145482|gb|EEZ71900.1| multidrug resistance protein A [Neisseria cinerea ATCC 14685]
          Length = 390

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 80/262 (30%), Gaps = 27/262 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 109 NELIQAVRQNRQQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 168

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      +S+L 
Sbjct: 169 AVSQAQAAVKAALAEESSARAALGGQVALRE-----------------QPAVQTAVSRLK 211

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P+ G +   +S           PLM +VP S   ++ A     Q++ 
Sbjct: 212 DAWLNLQRTQIRAPVDGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRR 269

Query: 342 VKKGYTATV------RFPHYADIREKKFKAIIEKIDPIISQQDNN--LQTQEYYEVILKI 393
           +K G    +      +   Y                 I +Q      ++  +   V +++
Sbjct: 270 MKIGQPVELVSDLYGKQTVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIEL 329

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
                  + + +      +V  
Sbjct: 330 NREDVDRHPLRIGLSMTVKVDI 351



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV+I     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 60  VAGRVVQITPQTGGTVRKVLHDDTDVVKKGDVLAVLDDGNYVLAYERAKNELIQAVRQNR 119

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           + +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 120 QQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 179

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 180 ALAEESSARAALGGQVALREQPAVQTAVSRLKDAWLNLQRT 220


>gi|145638281|ref|ZP_01793891.1| multidrug resistance protein A [Haemophilus influenzae PittII]
 gi|148826457|ref|YP_001291210.1| multidrug resistance protein A [Haemophilus influenzae PittEE]
 gi|229845950|ref|ZP_04466062.1| multidrug resistance protein A [Haemophilus influenzae 7P49H1]
 gi|260581726|ref|ZP_05849523.1| multidrug resistance protein A [Haemophilus influenzae NT127]
 gi|145272610|gb|EDK12517.1| multidrug resistance protein A [Haemophilus influenzae PittII]
 gi|148716617|gb|ABQ98827.1| multidrug resistance protein A [Haemophilus influenzae PittEE]
 gi|229810954|gb|EEP46671.1| multidrug resistance protein A [Haemophilus influenzae 7P49H1]
 gi|260095319|gb|EEW79210.1| multidrug resistance protein A [Haemophilus influenzae NT127]
 gi|309751434|gb|ADO81418.1| Multidrug resistance protein EmrA [Haemophilus influenzae R2866]
          Length = 390

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 96/292 (32%), Gaps = 37/292 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +   T +K+      S   +L   + ++  +      L++        L+  Q +L
Sbjct: 87  DILVELDDTNAKLSFEQAKS---NLANAVRQVEQLGFTVQQLQSAVHANEISLAQAQGNL 143

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L +  A+ +      +  V  +   L  + ++       ++ +      +  N  
Sbjct: 144 ARRVQLEKMGAIDKESFQHAKEAVELAKANLNASKNQLAANQALLSNVPLREQPQIQNA- 202

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                            MS L       ++  I SPI G +                 LM
Sbjct: 203 -----------------MSSLKQAWLNLQRTKIRSPIDGYVARRNV-QVGQAVSVGGALM 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +V  ++  ++ A     Q+ +++ G    + F  Y   + K+F  +I  I+        
Sbjct: 245 AVV-SNEQMWLEANFKETQLTNMRIGQPVKIHFDLYG--KNKEFDGVINGIEMGTGNAFS 301

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             P  +   N ++  +   V +K+    F++  + +  G  A       +++
Sbjct: 302 LLPSQNATGNWIKVVQRVPVRIKLDPQQFTETPLRI--GLSATAKVRISDSS 351



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 59/175 (33%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V + S  +G + K   +N  ++  G  L+  +D       +  K ++ N    ++
Sbjct: 57  VGGNQVMVSSQVAGNVAKINADNMDKVHAGDILVELDDTNAKLSFEQAKSNLANAVRQVE 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                +  L +     E +    +  L     L K  +   + F +   +V  +      
Sbjct: 117 QLGFTVQQLQSAVHANEISLAQAQGNLARRVQLEKMGAIDKESFQHAKEAVELAKANLNA 176

Query: 170 RMRSIYLNR-----LDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
               +  N+     + L  +  +  A+ S  Q  L + +          V++ ++
Sbjct: 177 SKNQLAANQALLSNVPLREQPQIQNAMSSLKQAWLNLQRTKIRSPIDGYVARRNV 231


>gi|294056113|ref|YP_003549771.1| hypothetical protein Caka_2585 [Coraliomargarita akajimensis DSM
           45221]
 gi|293615446|gb|ADE55601.1| hypothetical protein Caka_2585 [Coraliomargarita akajimensis DSM
           45221]
          Length = 542

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 76/216 (35%), Gaps = 22/216 (10%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + E       +E RE +     +   +   EL     LE +NY +  +R L         
Sbjct: 336 RVEEGALLIEMEGRETLARLAEVEARLASVELSLARELESSNYAEATARRL-----EVQG 390

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYN-QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +  +L   R+   + +P+ G ++ N    +     +  +PL++I P  +      +V
Sbjct: 391 LQHERELLRYYRDHLQLRAPMTGVVIANDLQRTEGVSVELGRPLLEIAPL-QQMIASIEV 449

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             + I  V  G    V+   Y  +R +     +  I      +D            + + 
Sbjct: 450 DERDIALVADGMAVEVQLSAYPGVRYRS---ELSMIARRAEVRDGR---------TVFLA 497

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII-HP 429
           + A  +++  LR G   + +    +  LA  +   P
Sbjct: 498 EAAVVNDSGILRPGMRGKAVIRGHSMPLAWHLFRKP 533



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 83/224 (37%), Gaps = 16/224 (7%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            ++   LL++ G++ +       P  +S  +   +        I +PF+G++    VE G
Sbjct: 283 RVRPWILLALFGLMAI-------PWPMSTRARVMLEPSMRR-VIAAPFTGVLDVVHVEGG 334

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++ +G  L+  E  ET   +   +  + ++   +  E  + ++       LE      E
Sbjct: 335 DRVEEGALLIEMEGRETLARLAEVEARLASVELSLARELESSNYAEATARRLEVQGLQHE 394

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +LL +   +    + +    I++  +  +     +    L    L+       A +   
Sbjct: 395 RELLRYYRDHLQLRAPMTGVVIANDLQRTEGVSVELGRPLLEIAPLQQMI----ASIEVD 450

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           ++D+     L       +  L+    + Y+S L +     E ++
Sbjct: 451 ERDIA----LVADGMAVEVQLSAYPGVRYRSELSMIARRAEVRD 490


>gi|56697557|ref|YP_167925.1| GAF domain-containing protein [Ruegeria pomeroyi DSS-3]
 gi|56679294|gb|AAV95960.1| GAF domain protein [Ruegeria pomeroyi DSS-3]
          Length = 617

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 54/191 (28%), Gaps = 22/191 (11%)

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQR--------TFADEMSKLTILEKTREQKTIL 293
           R +       N   A   +E    L    R          +   +++ +LE+   +  + 
Sbjct: 420 RDLRLEIARWNTVRAQRQREYETALADRDRAAIGITATQISQAEAEIALLEERLARTQLR 479

Query: 294 SPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +P  G ++  +   S      + Q L +I P      +   V  + +  V +G    V  
Sbjct: 480 APFDGVVLSGDLDQSVGAPVSRGQVLYEIAPLDAYRIV-LSVDERDLALVGEGLAGEVIL 538

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                         +  +  +   ++           + ++        N+ LR G    
Sbjct: 539 TALPGRTFGVETGRVTSVAGVEDGRN-----------VFRVDAQLPEQTNL-LRPGMEGI 586

Query: 413 VLFTAKNTTLA 423
              T     L 
Sbjct: 587 AKITVDERPLL 597



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 66/211 (31%), Gaps = 21/211 (9%)

Query: 14  PASLKRMTLLSIIGIIGLITW--SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           P        + + G+     W  ++   I       GEI        + SP  G +    
Sbjct: 347 PRKAGLKAAILLAGVALWFAWTTAVPFHITADARVEGEI-----RRVVASPLDGYVASAA 401

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
              G  + +   L T +D +    +++ + +    +   + E +  D       +     
Sbjct: 402 AIPGDIVAENDILATLDDRDLR--LEIARWNTVRAQRQREYETALADRDRAAIGITATQI 459

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGI---SSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E ++     +   T  +    G+     + +S+   ++R + +Y             
Sbjct: 460 SQAEAEIALLEERLARTQLRAPFDGVVLSGDLDQSVGAPVSRGQVLYEI-----APLDAY 514

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           R +LS  ++DL     L  +    +  L   
Sbjct: 515 RIVLSVDERDLA----LVGEGLAGEVILTAL 541


>gi|254471215|ref|ZP_05084617.1| ABC exporter membrane fusion protein, DevB family [Pseudovibrio sp.
           JE062]
 gi|211959361|gb|EEA94559.1| ABC exporter membrane fusion protein, DevB family [Pseudovibrio sp.
           JE062]
          Length = 409

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/393 (13%), Positives = 117/393 (29%), Gaps = 117/393 (29%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSG---IIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +V + G+++  D V  I  PF      I    V  G  + +GT L + ++  +     
Sbjct: 97  AGAVVALGKLIPRDGVSTIALPFGAGDARIADLPVSVGDWVKKGTILASLDNRPS----- 151

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S++  +  +   +++L  +                                     
Sbjct: 152 -LEASVEAAKAEVAVSEASLSQV------------------------------------- 173

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                          SI  ++++ E   +  +      + +L   K+LF +  V++  L+
Sbjct: 174 -------------QLSIKASQVENEADLNRAKTNADLARAELERTKSLFARKVVTEAQLD 220

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + +     + L++       K           +A++E A              R      
Sbjct: 221 RAKAEAESALLDVARKEATLKRY--SSTADISQADVELAK-------------RKLQSSQ 265

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY-------- 329
             L   E   E+  + +P  GT++           Q  +      P S            
Sbjct: 266 IALRTAEVNLEKSIVRAPFDGTVLDLL-------VQPGER-----PSSAGLIEFGNTREM 313

Query: 330 -IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
               ++   QI  +  G    +R    A     + +  + +I  I+ +Q+          
Sbjct: 314 TAEMEIYQNQIGRLNIGDAVVLRAEALAQ----ELRGTLTEIGLIVGRQN---------- 359

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            I+ +   A +D  +         V+ T   T+
Sbjct: 360 -IISVDPAANTDARV-------VTVVVTLDETS 384


>gi|329114172|ref|ZP_08242934.1| Multidrug resistance protein A [Acetobacter pomorum DM001]
 gi|326696248|gb|EGE47927.1| Multidrug resistance protein A [Acetobacter pomorum DM001]
          Length = 399

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/413 (12%), Positives = 125/413 (30%), Gaps = 81/413 (19%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSIL---LPIEISVSSSGEILNEDNVVEIKSPF 63
           +  K N    +    +++++ +   + W +    +  + + ++          + I    
Sbjct: 32  EKKKENPRRKIILTGVIAVLAVGAGVYWFMTRNEVETDDAFTA-------GRAITIAPHV 84

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V +   + +G  L   +  +     D     +++        K+A D ++  
Sbjct: 85  SGYVTELLVNDNQFVRKGQLLARIDPRDWKAARDQAAAQVES----AQASKNASDMMHM- 139

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                         +L+F GK      ++                               
Sbjct: 140 ------------VAMLEFPGKLLQAKGQLE----------------------------AA 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K+   +A     ++ +       E+ A SQ D++     +  +   +       +  +  
Sbjct: 160 KAQEFKAQTDFRRQHV------VERAATSQQDIDSARAALDAAKARVIAAQGAVQMAMPV 213

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              + + A              + Q +       ++L       E   I +P  G I   
Sbjct: 214 QPNIQNTAI------------QITQEEAAVKTAQARLETANLNLEWTEIRAPHDGWISQ- 260

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKK 362
           ++    NY QQ Q ++ IV      ++ A     QI  +K G    ++   Y  ++    
Sbjct: 261 RNLEQGNYVQQGQNILSIV--EPEVWVVANYKETQITRMKPGQKVDIKVDAYPSLKVHGH 318

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPA 411
             ++ +      S       T  Y +++ ++      D+ +     L  G   
Sbjct: 319 IDSLQKGTGAQFSAFPPENATGNYVKIVQRVPVKILIDDGLDPNQPLALGMSV 371


>gi|319775169|ref|YP_004137657.1| multidrug efflux system [Haemophilus influenzae F3047]
 gi|317449760|emb|CBY85967.1| multidrug efflux system [Haemophilus influenzae F3047]
          Length = 390

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 96/292 (32%), Gaps = 37/292 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +   T +K+      S   +L   + ++  +      L++        L+  Q +L
Sbjct: 87  DILVELDDTNAKLSFEQAKS---NLANAVRQIEQLGFTVQQLQSAVHANEISLAQAQGNL 143

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L +  A+ +      +  V  +   L  + ++       ++ +      +  N  
Sbjct: 144 ARRVQLEKMGAIDKESFQHAKEAVELAKANLNASKNQLAANQALLSNVPLREQPQIQNA- 202

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                            MS L       ++  I SPI G +                 LM
Sbjct: 203 -----------------MSSLKQAWLNLQRTKIRSPIDGYVARRNV-QVGQAVSVGGALM 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +V  ++  ++ A     Q+ +++ G    + F  Y   + K+F  +I  I+        
Sbjct: 245 AVV-SNEQMWLEANFKETQLTNMRIGQPVKIHFDLYG--KNKEFDGVINGIEMGTGNAFS 301

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             P  +   N ++  +   V +K+    F++  + +  G  A       +++
Sbjct: 302 LLPSQNATGNWIKVVQRVPVRIKLDPQQFTETPLRI--GLSATAKVRISDSS 351



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 15/208 (7%)

Query: 20  MTLLSIIGIIGLITWSILLP-IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           + +L II I   + W   L   E +  +      E N V + S  +G + K   +N  ++
Sbjct: 28  ILVLLIISIACALYWFFFLKDFEETEDAY----VEGNQVMVSSQVAGNVAKINADNMDKV 83

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             G  L+  +D       +  K ++ N    I+     +  L +     E +    +  L
Sbjct: 84  HAGDILVELDDTNAKLSFEQAKSNLANAVRQIEQLGFTVQQLQSAVHANEISLAQAQGNL 143

Query: 139 LD--FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-----LDLENKSSLLRAL 191
                L K  +   + F +   +V  +          +  N+     + L  +  +  A+
Sbjct: 144 ARRVQLEKMGAIDKESFQHAKEAVELAKANLNASKNQLAANQALLSNVPLREQPQIQNAM 203

Query: 192 LSSHQKDLTMMKNLFEK---NAVSQNDL 216
            S  Q  L + +          V++ ++
Sbjct: 204 SSLKQAWLNLQRTKIRSPIDGYVARRNV 231


>gi|300986093|ref|ZP_07177709.1| efflux pump membrane protein [Escherichia coli MS 45-1]
 gi|300407918|gb|EFJ91456.1| efflux pump membrane protein [Escherichia coli MS 45-1]
          Length = 390

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 32  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 85  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 144

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 145 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 204

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 205 EVRNAWLALERT 216


>gi|254418169|ref|ZP_05031893.1| auxiliary transport protein, MFP family, putative [Brevundimonas
           sp. BAL3]
 gi|196184346|gb|EDX79322.1| auxiliary transport protein, MFP family, putative [Brevundimonas
           sp. BAL3]
          Length = 359

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 98/310 (31%), Gaps = 17/310 (5%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E +   F+     ++      R  ++L    +       +           L      ++
Sbjct: 36  ESTDNAFVQADTTLISPQLAGRVTEVLVGDNQRVEAGQVLVKLDDGDQRAELARAEANLQ 95

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL--FEKNAVSQNDLNQQERIVYKSTLEL 230
           +      +++ ++   +A +++    +T  +      +  V +     Q+  V +  ++ 
Sbjct: 96  AALAAVGNVDAQAEQEKAAIAARAAAVTQARAQAGLARAEVDRYGKLAQQGWVSQQRIQT 155

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                   +      +    A    A  L                 +    I     E+ 
Sbjct: 156 ERAGAATADASVQQAQAALVAEQRTAGVLGSTREQSVAAVEQARAVVETARIA---LERT 212

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +PIAG +V  +S     Y      L+ IVP ++   + A     Q+  ++ G T  +
Sbjct: 213 VIRAPIAG-VVGARSVRPGQYVNAGTQLLSIVPLTQTYIV-ANFKETQLDRMRLGQTVEI 270

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNI 403
               +   +    +  I+   P    +         T  + ++  ++     ++ +D ++
Sbjct: 271 SADAFPGRK---IEGRIDSFAPATGSEFALIPVENATGNFTKITQRVPVRIVVSGADRSL 327

Query: 404 ELRNGFPAEV 413
            LR G   +V
Sbjct: 328 ALRPGLSVDV 337


>gi|329122912|ref|ZP_08251483.1| multidrug resistance protein A [Haemophilus aegyptius ATCC 11116]
 gi|327471843|gb|EGF17283.1| multidrug resistance protein A [Haemophilus aegyptius ATCC 11116]
          Length = 390

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 87/274 (31%), Gaps = 34/274 (12%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                +L   + ++  +      L++        L+  Q +L     L +  A+ +    
Sbjct: 102 EQAKSNLANAVRQVEQLGFTVQQLQSAVHANEISLAQAQGNLARRVQLEKMGAIDKESFQ 161

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             +  V  +   L  + ++       +  +      +  N                   M
Sbjct: 162 HAKEAVELAKANLNASKNQLAANQALLRNVPLREQPQIQNA------------------M 203

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           S L       ++  I SPI G +                 LM +V  ++  ++ A     
Sbjct: 204 SSLKQAWLNLQRTKIRSPIDGYVARRNV-QVGQAVSVGGALMAVV-SNEQMWLEANFKET 261

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYY 387
           Q+ +++ G    + F  Y   + K+F  +I  I+          P  +   N ++  +  
Sbjct: 262 QLTNMRIGQPVKIHFDLYG--KNKEFDGVINGIEMGTGNAFSLLPSQNATGNWIKVVQRV 319

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            V +K+    F++  + +  G  A       +++
Sbjct: 320 PVRIKLDPQQFTETPLRI--GLSATAKVRISDSS 351



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 59/175 (33%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V + S  +G + K   +N  ++  G  L+  +D       +  K ++ N    ++
Sbjct: 57  VGGNQVMVSSQVAGNVAKINADNMDKVHAGNILVELDDTNAKLSFEQAKSNLANAVRQVE 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                +  L +     E +    +  L     L K  +   + F +   +V  +      
Sbjct: 117 QLGFTVQQLQSAVHANEISLAQAQGNLARRVQLEKMGAIDKESFQHAKEAVELAKANLNA 176

Query: 170 RMRSIYLNRLDLEN-----KSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
               +  N+  L N     +  +  A+ S  Q  L + +          V++ ++
Sbjct: 177 SKNQLAANQALLRNVPLREQPQIQNAMSSLKQAWLNLQRTKIRSPIDGYVARRNV 231


>gi|298490355|ref|YP_003720532.1| RND family efflux transporter subunit MFP ['Nostoc azollae' 0708]
 gi|298232273|gb|ADI63409.1| efflux transporter, RND family, MFP subunit ['Nostoc azollae' 0708]
          Length = 461

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 72/228 (31%), Gaps = 27/228 (11%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +           L    + +        + + +    R  +   Q D    + LF+  A+
Sbjct: 131 LLMTASQQAEAELATSQSEVARAMTQVSNAQAEVEKARLEVIQAQADSQRQQQLFKAGAI 190

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S                   E   +Q N      +   +A +E     K+    +   Q 
Sbjct: 191 S-------------------EQAAQQANTKAQTVQKALQATIEQVRTEKQA---VAAAQG 228

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               + + +   ++ R    ++SPI G +   +     N  Q    ++KI   S++  + 
Sbjct: 229 RVFAQQAVVKAAKERRSYSRLISPITGVVTE-KVTEPGNLLQPGSEVLKIADLSRIKVV- 286

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +V+  ++  ++ G +  VR   + D         + +I P       
Sbjct: 287 VQVSELELAKIQVGQSVQVRLDAFPDQT---IIGRVARISPTADSTAR 331



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/154 (11%), Positives = 59/154 (38%), Gaps = 5/154 (3%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCH 109
             V ++S   G +    ++ G  + +G  +   +D+           +L     +  R  
Sbjct: 95  RTVSVRSQVEGRLIALNLDVGDTVNRGEIISQLDDVLLMTASQQAEAELATSQSEVARAM 154

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                +  +    + +V++   +S+ +Q L   G      ++  N    +V ++L+  + 
Sbjct: 155 TQVSNAQAEVEKARLEVIQAQADSQRQQQLFKAGAISEQAAQQANTKAQTVQKALQATIE 214

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           ++R+        + +    +A++ + ++  +  +
Sbjct: 215 QVRTEKQAVAAAQGRVFAQQAVVKAAKERRSYSR 248


>gi|289624163|ref|ZP_06457117.1| RND family efflux transporter MFP subunit [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
          Length = 390

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 64/182 (35%), Gaps = 17/182 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR  P     +  L +  +I +  W I+                IE SV++ G +    
Sbjct: 1   MKRARPPRRALLVALCLFPVIAVCAWQIMPDSKGHAATVTVTRSNIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  +G I K   + G Q+ +G  L+  +       +D  + +I+NL+  +  ++
Sbjct: 61  YV-DVGSQATGQIMKIHAQVGDQVKEGDLLVEIDPSTQKARLDAARYAIENLKAQLQEQR 119

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +  +    K    ++       +  D       +  +     +      +      +RS 
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAA--ESEFRATQARVDMFKAQILEAQAALRSD 177

Query: 175 YL 176
             
Sbjct: 178 EA 179



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 71/223 (31%), Gaps = 12/223 (5%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIYAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWSSTVRQILPVPPRPLDQANQGGGSPSSARKSGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            V+L    L   +++  L      ++ F A   +    +  P+
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTTQIFFVAG--SAQNPLTAPL 330


>gi|260910369|ref|ZP_05917041.1| HlyD family secretion protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260635445|gb|EEX53463.1| HlyD family secretion protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 297

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 87/242 (35%), Gaps = 39/242 (16%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            R D++ + ++ +  ++    +    + L +  A +   L+  +  V     +L+  I  
Sbjct: 88  QRPDIQAQIAVTKQQINKALVEQRRTEALLKDGAATSKQLDDAQNAVAVLQKQLQGQISL 147

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +N  R +N     A+++    +                            E+  I SPI
Sbjct: 148 LQNSTRSLNSQMSGADIQRYEVM-------------------------DQLEKCHIKSPI 182

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT++  +      +    +PL K V  ++   +RA +T  Q+  V+ G    V F  Y 
Sbjct: 183 TGTVLE-KYAEQGEFTAIGRPLFK-VADTRNMTLRAYITSIQLAKVRVGQRVKV-FADYG 239

Query: 357 DIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           D     ++  +  I P           ++ +  + Y V + +       NN  ++ G   
Sbjct: 240 DDTRHTYEGTVTWISPKAEFTPKSILTDDERADQVYAVKVSV------KNNGYIKIGMYG 293

Query: 412 EV 413
           EV
Sbjct: 294 EV 295


>gi|170749842|ref|YP_001756102.1| secretion protein HlyD family protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656364|gb|ACB25419.1| secretion protein HlyD family protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 421

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/378 (12%), Positives = 108/378 (28%), Gaps = 90/378 (23%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++   V NG  + +G  +   +D +    +   +  +      I       +    + 
Sbjct: 113 GYLQSVPVVNGLAVRKGDVIAKLDDGDYRLALQAAQDKLATQESTIARIGRQAEAAQAQV 172

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                  ++     +     +            S+  ++  +  +R+     +R   E  
Sbjct: 173 AQAAAQLDATRADAVRAQADF----------ARSTQMQADYVAKSRIDQTRADRDRTEAS 222

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              + A L + + ++ +++               Q+R       ELR  +   +      
Sbjct: 223 VKAMEAGLLAARANVDVLQ--------------AQKREAESLAAELRTAVDRARR----- 263

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                                                      +   I +P  G +V N+
Sbjct: 264 -----------------------------------------DLDFTVIRAPFDG-VVGNK 281

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +  +  Y      +  +VP  +   I A     Q++ ++ G   TV    Y D    +  
Sbjct: 282 AVEAGAYVGPGTRVAALVPL-QSVRIDANFKETQVERMRPGQPVTVTVDAYPDR---EIH 337

Query: 365 AIIEKIDPII----SQQDNNLQTQEYYE------VILKITDLAFSDNNIELRNGFPAEVL 414
           A++E   P      S    +  T  + +      V +++ +    +    LR G  A V 
Sbjct: 338 AVVESFSPASGSVFSLLPPDNATGNFTKIVQRLPVRVRVPEEVAREG--LLRPGLSAVVR 395

Query: 415 FTAK---NTTLAQEIIHP 429
              +   + ++      P
Sbjct: 396 VDTRTGADRSVLDRASAP 413


>gi|148265123|ref|YP_001231829.1| secretion protein HlyD family protein [Geobacter uraniireducens
           Rf4]
 gi|146398623|gb|ABQ27256.1| secretion protein HlyD family protein [Geobacter uraniireducens
           Rf4]
          Length = 334

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 82/265 (30%), Gaps = 29/265 (10%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           ++  +     ++  +  +           +    L RA     + +    +NL++K   S
Sbjct: 88  YSVRLQEAASAVGAERAKFSEADTRISAAKATLDLQRANFKFAEIEKNRAENLYQKEVYS 147

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +    +       +  +++    + +N                          L Q+  T
Sbjct: 148 RVQYERAMTAYEVTAAQVKGAEEQLRNTESQ---------------------KLTQSF-T 185

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
             ++ +   +         I +P+ G +   +S    N  Q  QPLM +V  ++  ++ A
Sbjct: 186 IDEKKATAAMAALNYNYTKIYAPVDGYVTK-KSVQLGNQIQAGQPLMAMVGSNE-IWLTA 243

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKK-----FKAIIEKIDPIISQQDNNLQTQEYY 387
                QI++++ G T       Y   + K                  ++       +   
Sbjct: 244 NFKETQIEYIRPGQTVEFSVDSYPGRKFKGKVDSIMPGTGVTFSAFPAENATGNYVKVVQ 303

Query: 388 EVILKITDLAFSDNNIELRNGFPAE 412
            + +KI      D    LR G  AE
Sbjct: 304 RIPVKIVVTEGMDKKHVLRIGMSAE 328



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 64/197 (32%), Gaps = 2/197 (1%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M +    N     K   ++S+I +I LI          +  S+ +   + N+  I +  +
Sbjct: 1   MAEEQNGNSRKKKKAFAIVSVIVVICLIATYFYSSYRKTHISTDDAFIDGNIHTIAAKIN 60

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V +   + +G+ L+  + ++ +  +     ++   R       + +       
Sbjct: 61  GTVKSVNVTDNQPVKKGSLLIELDPVDYSVRLQEAASAVGAERAKFSEADTRISAAKATL 120

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D+    F+  E +       Y         Y  +     +     +++       + E++
Sbjct: 121 DLQRANFKFAEIEKNRAENLYQKEVYSRVQYERAMTAYEVTA--AQVKGAEEQLRNTESQ 178

Query: 185 SSLLRALLSSHQKDLTM 201
                  +   +    M
Sbjct: 179 KLTQSFTIDEKKATAAM 195


>gi|223934522|ref|ZP_03626443.1| efflux transporter, RND family, MFP subunit [bacterium Ellin514]
 gi|223896985|gb|EEF63425.1| efflux transporter, RND family, MFP subunit [bacterium Ellin514]
          Length = 443

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 64/203 (31%), Gaps = 16/203 (7%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           + L+  E  +++   L     + D A LE          +L  + +      + L   E 
Sbjct: 124 ANLQKAELEYQRNESLFKTKLISDSAFLEAKTTYDVAKANLVGSIQQVEMAHASLQKAED 183

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
              + TI SP+ GTI    S                +M +   S L  +  +V   +I  
Sbjct: 184 DLSKTTIYSPLDGTITKLNSQLGERVVGTAMMAGTEIMTV---SDLNAMETRVDIGEIDV 240

Query: 342 V--KKGYTATVRFPHYADIRE-KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           V  + G  A +    + D +       I        +   ++      +EV ++I +   
Sbjct: 241 VLIQVGQKARLDVDAFKDRKFNGTVTDIANSSKNSSNATSSSSTEATKFEVKIRIDEKE- 299

Query: 399 SDNNIELRNGFPAEVLFTAKNTT 421
                + R G         +  T
Sbjct: 300 -----QFRPGMSVTAEIETRYRT 317



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 63/193 (32%), Gaps = 4/193 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +   V ++G++     V    SP  SG I    V+ G  + +G  L+  +    T   + 
Sbjct: 50  LTELVVANGKVQPVVQVKI--SPEVSGEITDLPVKEGQCVKKGDLLVKIKPDNYTASRNS 107

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL-GKYHSTCSKVFNYGI 157
              + K    + +T  + L     +Y   E  F+++      FL  K     +K    G 
Sbjct: 108 ADANYKYSVANSNTAWANLQKAELEYQRNESLFKTKLISDSAFLEAKTTYDVAKANLVGS 167

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                     L +                 +  L S   + +     +     ++ +DLN
Sbjct: 168 IQQVEMAHASLQKAEDDLSKTTIYSPLDGTITKLNSQLGERVVGTAMMAGTEIMTVSDLN 227

Query: 218 QQERIVYKSTLEL 230
             E  V    +++
Sbjct: 228 AMETRVDIGEIDV 240


>gi|149010908|ref|ZP_01832213.1| fatty acid/phospholipid synthesis protein [Streptococcus pneumoniae
           SP19-BS75]
 gi|168493746|ref|ZP_02717889.1| transport protein ComB [Streptococcus pneumoniae CDC3059-06]
 gi|147764544|gb|EDK71474.1| fatty acid/phospholipid synthesis protein [Streptococcus pneumoniae
           SP19-BS75]
 gi|183576235|gb|EDT96763.1| transport protein ComB [Streptococcus pneumoniae CDC3059-06]
          Length = 449

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/439 (10%), Positives = 146/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV------SQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               + +  +    +L  +N         ++   +  +   ++  ++   I + ++ L  
Sbjct: 189 RDYQTAKSAIETGTSLAGQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 244 INELY--------------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               Y               +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|26249080|ref|NP_755120.1| multidrug resistance protein A [Escherichia coli CFT073]
 gi|91212046|ref|YP_542032.1| multidrug resistance protein A [Escherichia coli UTI89]
 gi|191167088|ref|ZP_03028909.1| multidrug resistance protein A [Escherichia coli B7A]
 gi|191171336|ref|ZP_03032885.1| multidrug resistance protein A [Escherichia coli F11]
 gi|193065982|ref|ZP_03047041.1| multidrug resistance protein A [Escherichia coli E22]
 gi|193071029|ref|ZP_03051957.1| multidrug resistance protein A [Escherichia coli E110019]
 gi|194427827|ref|ZP_03060373.1| multidrug resistance protein A [Escherichia coli B171]
 gi|254037728|ref|ZP_04871786.1| multidrug resistance protein A [Escherichia sp. 1_1_43]
 gi|293412042|ref|ZP_06654765.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293449003|ref|ZP_06663424.1| multidrug resistance protein A [Escherichia coli B088]
 gi|298381918|ref|ZP_06991515.1| multidrug resistance protein A [Escherichia coli FVEC1302]
 gi|331648405|ref|ZP_08349493.1| multidrug resistance protein A [Escherichia coli M605]
 gi|331654167|ref|ZP_08355167.1| multidrug resistance protein A [Escherichia coli M718]
 gi|331664241|ref|ZP_08365147.1| multidrug resistance protein A [Escherichia coli TA143]
 gi|331669422|ref|ZP_08370268.1| multidrug resistance protein A [Escherichia coli TA271]
 gi|331674204|ref|ZP_08374964.1| multidrug resistance protein A [Escherichia coli TA280]
 gi|331678662|ref|ZP_08379336.1| multidrug resistance protein A [Escherichia coli H591]
 gi|331684302|ref|ZP_08384894.1| multidrug resistance protein A [Escherichia coli H299]
 gi|332280656|ref|ZP_08393069.1| multidrug resistance protein A [Shigella sp. D9]
 gi|26109487|gb|AAN81690.1|AE016765_92 Multidrug resistance protein A [Escherichia coli CFT073]
 gi|91073620|gb|ABE08501.1| multidrug resistance protein A [Escherichia coli UTI89]
 gi|190902870|gb|EDV62598.1| multidrug resistance protein A [Escherichia coli B7A]
 gi|190908270|gb|EDV67860.1| multidrug resistance protein A [Escherichia coli F11]
 gi|192926396|gb|EDV81031.1| multidrug resistance protein A [Escherichia coli E22]
 gi|192955687|gb|EDV86162.1| multidrug resistance protein A [Escherichia coli E110019]
 gi|194414060|gb|EDX30336.1| multidrug resistance protein A [Escherichia coli B171]
 gi|226839352|gb|EEH71373.1| multidrug resistance protein A [Escherichia sp. 1_1_43]
 gi|291322093|gb|EFE61522.1| multidrug resistance protein A [Escherichia coli B088]
 gi|291468813|gb|EFF11304.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298277058|gb|EFI18574.1| multidrug resistance protein A [Escherichia coli FVEC1302]
 gi|323935621|gb|EGB31938.1| efflux pump membrane protein [Escherichia coli E1520]
 gi|323941480|gb|EGB37663.1| efflux pump membrane protein [Escherichia coli E482]
 gi|323960569|gb|EGB56196.1| efflux pump membrane protein [Escherichia coli H489]
 gi|331042152|gb|EGI14294.1| multidrug resistance protein A [Escherichia coli M605]
 gi|331047549|gb|EGI19626.1| multidrug resistance protein A [Escherichia coli M718]
 gi|331058172|gb|EGI30153.1| multidrug resistance protein A [Escherichia coli TA143]
 gi|331063090|gb|EGI35003.1| multidrug resistance protein A [Escherichia coli TA271]
 gi|331068298|gb|EGI39693.1| multidrug resistance protein A [Escherichia coli TA280]
 gi|331073492|gb|EGI44813.1| multidrug resistance protein A [Escherichia coli H591]
 gi|331077917|gb|EGI49123.1| multidrug resistance protein A [Escherichia coli H299]
 gi|332103008|gb|EGJ06354.1| multidrug resistance protein A [Shigella sp. D9]
          Length = 394

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 102 RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 161

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 162 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 215

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 216 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 261

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 262 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 319

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 320 VQRLPVRIELDQKQLEQYPLRI 341



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 36  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 88

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 89  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 148

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 149 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 208

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 209 EVRNAWLALERT 220


>gi|150017335|ref|YP_001309589.1| RND family efflux transporter MFP subunit [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903800|gb|ABR34633.1| efflux transporter, RND family, MFP subunit [Clostridium
           beijerinckii NCIMB 8052]
          Length = 431

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 83/271 (30%), Gaps = 26/271 (9%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + +  ++  +  +  + +K      A      Q ++      +   +     I +    
Sbjct: 60  DSYKATLEAYQQGI--VTSKIAAKVVAVSVENGQYVNAGDTIATLDDQDIQNNIKTAQAQ 117

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +++   ++ S        +     L+ L+   Q++    K LF+  A+S+ DL   E+ +
Sbjct: 118 VEVSEQQVNSTQQQLNSSQVTLQKLQILMDDAQRNYDRQKTLFDGGAISKTDLESAEKAL 177

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             S  +    +   ++    I         +  N                      L   
Sbjct: 178 NTSKADYSSGLASIESAKASIESSKASLEAQKVN----------------------LQKA 215

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +       I +PI+G I           A Q   L K V      Y   +V  ++I  VK
Sbjct: 216 QNDLANTVIKAPISGVISDKTLN-VGQMASQGAALAK-VNDISSVYATIQVPQEKITGVK 273

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            G  AT+         +   +A+    D   
Sbjct: 274 IGQAATITVDGNDKTYDGTIEAMDSAADATT 304



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 70/222 (31%), Gaps = 14/222 (6%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIK--------KFQVENGSQILQGTPLLTFEDIETT 93
               +  + L +     +++   GI+            VENG  +  G  + T +D +  
Sbjct: 49  QIAKAQEKSLGDSYKATLEAYQQGIVTSKIAAKVVAVSVENGQYVNAGDTIATLDDQDIQ 108

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH--STCSK 151
           + I   +  ++     +++ +  L+        L+   +  +         +   +    
Sbjct: 109 NNIKTAQAQVEVSEQQVNSTQQQLNSSQVTLQKLQILMDDAQRNYDRQKTLFDGGAISKT 168

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK--- 208
                  ++  S     + + SI   +  +E+  + L A   + QK    + N   K   
Sbjct: 169 DLESAEKALNTSKADYSSGLASIESAKASIESSKASLEAQKVNLQKAQNDLANTVIKAPI 228

Query: 209 -NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
              +S   LN  +     + L    +I      ++   E   
Sbjct: 229 SGVISDKTLNVGQMASQGAALAKVNDISSVYATIQVPQEKIT 270


>gi|300704332|ref|YP_003745935.1| multidrug resistance protein a [Ralstonia solanacearum CFBP2957]
 gi|299071996|emb|CBJ43326.1| Multidrug resistance protein A [Ralstonia solanacearum CFBP2957]
          Length = 429

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 98/295 (33%), Gaps = 28/295 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + QL+                 +     +L   + ++R++Y N     +  ++  
Sbjct: 85  AIRADDTQLVTSGQPLIELDRADARVALEQSEAALAQAVRQVRTLYSNTGAYTSTLAMRE 144

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L+  ++DLT  K +    AVSQ ++   +  +  +   +     + +        L D
Sbjct: 145 SDLAKAKEDLTRRKQIAGTGAVSQEEIAHAQISLQAAEAAVETAKEQLQANRV----LTD 200

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +  LE    + + +  + +    +A              + ++ + + G +   +S    
Sbjct: 201 QTTLERHPNVLQAAAKVREAYLAYA--------------RTSLPASVTGYVAK-RSVQVG 245

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--------K 361
                  PLM IVP     ++ A     Q++H++ G    +    Y              
Sbjct: 246 QRVAPGTPLMAIVPLD-QLWVDANFKEVQVRHMRVGQPVELVADVYGGSVTYHGKVVGFS 304

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                   + P  +   N ++  +   V + +      D+ + +     A+V   
Sbjct: 305 AGTGSAFSLLPAQNATGNWIKVVQRLPVRVSLDPKELKDHPLRVGLSMEAKVDIH 359



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 62/182 (34%), Gaps = 10/182 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + NVV++    +G +   + ++   +  G PL+  +  +    ++  + ++      + 
Sbjct: 68  VQGNVVQVTPQVAGTVVAIRADDTQLVTSGQPLIELDRADARVALEQSEAALAQAVRQVR 127

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           T  S      +   + E      +E L     +    +   +   +   S+  +     T
Sbjct: 128 TLYSNTGAYTSTLAMRESDLAKAKEDLTRRKQIAGTGAVSQEEIAHAQISLQAAEAAVET 187

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
               +  NR+      LE   ++L+A     +  L   +          V++  +   +R
Sbjct: 188 AKEQLQANRVLTDQTTLERHPNVLQAAAKVREAYLAYARTSLPASVTGYVAKRSVQVGQR 247

Query: 222 IV 223
           + 
Sbjct: 248 VA 249


>gi|325281147|ref|YP_004253689.1| efflux transporter, RND family, MFP subunit [Odoribacter
           splanchnicus DSM 20712]
 gi|324312956|gb|ADY33509.1| efflux transporter, RND family, MFP subunit [Odoribacter
           splanchnicus DSM 20712]
          Length = 352

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 76/214 (35%), Gaps = 24/214 (11%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           ++ E  AV    + + E   Y++ ++L     E K +   I E   E             
Sbjct: 87  DIVEAGAV----IIRLENKEYENNVQL-----ESKKLQIQITEKEWEGQKILLEKGGATE 137

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           +D+   + ++ +    L     T E+ +I +P  G IV    ++          ++ ++ 
Sbjct: 138 KDVNNAENSYINAKLALENGYITLEKLSIKAPFKGVIVNLPYYTPGVEVASGSVMVGLM- 196

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                Y+  +     +  ++ G    V   +Y  I+    + I+ ++ P I+++      
Sbjct: 197 DYSKMYVETQFPENTLTKLRIGQQ--VHITNYN-IKSDTLRGILTQLSPAINEETRTFSG 253

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                       +   + +++LR G  A+     
Sbjct: 254 Y-----------IEIDNPDLKLRPGMFAKADIVT 276


>gi|330869813|gb|EGH04522.1| RND family efflux transporter MFP subunit [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 390

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 64/182 (35%), Gaps = 17/182 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR  P     +  L +  +I +  W I+                IE SV++ G +    
Sbjct: 1   MKRARPPRRALLVALCLFPVIAVCAWQIMPDSKGHAATVTVTRSNIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  +G I K   + G Q+ +G  L+  +       +D  + +I+NL+  +  ++
Sbjct: 61  YV-DVGSQATGQIMKIHAQVGDQVKEGDLLVEIDPSTQKARLDAARYAIENLKAQLQEQR 119

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +  +    K    ++       +  D       +  +     +      +      +RS 
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAA--ESEFRATQARVDMFKAQILEAQAALRSD 177

Query: 175 YL 176
             
Sbjct: 178 EA 179



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 71/223 (31%), Gaps = 12/223 (5%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIYAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWSSTVRQILPVPPRPLDQANQGGGSPSSARKSGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            V+L    L   +++  L      ++ F A   +    +  P+
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTTQIFFVAG--SAQNTLTAPL 330


>gi|329913173|ref|ZP_08275903.1| GAF domain protein [Oxalobacteraceae bacterium IMCC9480]
 gi|327545409|gb|EGF30624.1| GAF domain protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 608

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 69/194 (35%), Gaps = 20/194 (10%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISR----DLEQNQRTFADEMSKLTILEKTREQKT 291
           +Q+++         +A      Y + +++     L  +        +++ +L +   + +
Sbjct: 410 DQRDLQLEYLRWASQAEQYSKQYQEAMAKADRVQLNISLAQVQQARAQMDLLAEQLARAS 469

Query: 292 ILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTAT 349
           I +P+ G +V  + S +  +  ++ Q L ++ P +     +   V    I  +++G    
Sbjct: 470 ITAPLDGIVVSGDLSQALGSAVKRGQTLFEVAPLNAYRVILE--VDESDITGIREGLRGE 527

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +               +I  + P+ S ++     + ++ V   +  ++      +LR G 
Sbjct: 528 LMLTALPGQVFPL---VISHLTPVTSSRE----GRSFFRVEADVEQVSD-----KLRPGM 575

Query: 410 PAEVLFTAKNTTLA 423
                       L 
Sbjct: 576 EGIGKIAIGQRKLI 589


>gi|145835|gb|AAA23724.1| multidrug resistance; putative [Escherichia coli str. K-12 substr.
           W3110]
          Length = 390

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAQAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIISPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 32  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQMQIMSQVSGSVTKVWADNTDFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 85  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAQAQSDYN 144

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 145 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 204

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 205 EVRNAWLALERT 216


>gi|330889231|gb|EGH21892.1| multidrug resistance protein [Pseudomonas syringae pv. mori str.
           301020]
          Length = 402

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 85/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   SL   + ++R +Y N   ++ + +  R  + + Q++    ++L    A+SQ
Sbjct: 101 EVSLQSAEVSLGKVVRQVRGLYSNVDGMKAQLAAQRTAVQTAQENYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +  EL                       + +  +  +   +  +    
Sbjct: 161 EELSHSRDSLTSAQSELNN------------------IQQQLSTSVALVDDTVVSSHPDV 202

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               S+L        + T+++P+ G +   +S       Q     M ++P     +I A 
Sbjct: 203 KAAASQLRQAFLANARSTLVAPVTGYVAK-RSVQLGQRIQPGTATMAVIPLD-QLWIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--------- 384
               Q+  ++ G    +    Y      K+   I+ +          L  Q         
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGSDV--KYSGTIDSLGAGTGSAFALLPAQNATGNWIKI 318

Query: 385 -EYYEVILKITDLAFSDNNIEL 405
            +   V + I     + + + +
Sbjct: 319 VQRVPVRVHINPEELAKHPLRI 340



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 66/188 (35%), Gaps = 13/188 (6%)

Query: 10  KRNHPASLKR----MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
            +  P   KR    + L  I+ I+GL  W+           + +     NVVEI    +G
Sbjct: 14  SQQTPKPGKRKFLLIGLAVIVVILGLAIWAWYEFYGQWSEETDDAYVNGNVVEITPLVTG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +     ++G  + +G  LL F+  +    +   +VS+  +   +    S +D +  +  
Sbjct: 74  TVISIGADDGDLVHEGQVLLKFDPSDAEVSLQSAEVSLGKVVRQVRGLYSNVDGMKAQLA 133

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
               A ++ +E              +    G +     L      + S      +++ + 
Sbjct: 134 AQRTAVQTAQENY---------NRRRSLAAGGAISQEELSHSRDSLTSAQSELNNIQQQL 184

Query: 186 SLLRALLS 193
           S   AL+ 
Sbjct: 185 STSVALVD 192


>gi|331019254|gb|EGH99310.1| HlyD family secretion protein [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 386

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/423 (11%), Positives = 121/423 (28%), Gaps = 94/423 (22%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI----TWSI---LLPIEISVSSSGEILNEDNVVEIKSP 62
            R+    +    +   + + G++     W       PIE + ++      +     I   
Sbjct: 31  PRSTRKRVVSSVIFGAVALAGVLLVLYAWQFPPFASPIESTENAQ----VKGQTTLIGPQ 86

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG + +  V++   +  G  L+  +D        + +  +      +  +K++L     
Sbjct: 87  LSGYVYEVPVQDFQFVKAGDLLVRLDD-------RIYRQRLDQALAQLAVQKASLANNLQ 139

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +    E     R+ +L + + +   + +                                
Sbjct: 140 QRRSAEATIGQRQAELQNSIAQSRKSAA-------------------------------- 167

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                          DL   + L    +VS+++L+       ++   + E          
Sbjct: 168 ---------------DLRRNQALVTDGSVSKSELDVTRAADAQANAAVAEAKAVLLIARE 212

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +  +           +   S +        A E++++       +   I++P  G +  
Sbjct: 213 DLQTVI----------VNRGSLEASVANAQAAIELARI-----DLDNTRIVAPRDGQLGQ 257

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP  +     A +   Q+ +V+ G   +            +
Sbjct: 258 IGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKETQMANVRLGQPVSFTVDALDGR---E 311

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVL 414
               +++I P    +      +  T  + ++  +I      D +      LR G    V 
Sbjct: 312 MHGHVQRISPAAGSEFSLLPADNATGNFVKISQRIPVRIVVDADQPMLEHLRPGMSVVVS 371

Query: 415 FTA 417
              
Sbjct: 372 IDT 374


>gi|296313446|ref|ZP_06863387.1| multidrug resistance protein A [Neisseria polysaccharea ATCC 43768]
 gi|296840037|gb|EFH23975.1| multidrug resistance protein A [Neisseria polysaccharea ATCC 43768]
          Length = 390

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 27/264 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 109 NELIQAVRQNRQQNAATSQAGAQVALHRADLARAQDDLRRRSALAESGAVSAEELAHARA 168

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      +S+L 
Sbjct: 169 AVSQAQAAVKAALAEESSARAALGGQVALRE-----------------QPAVQTAVSRLK 211

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P+ G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 212 DAWLNLQRTQIRAPVDGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 269

Query: 342 VKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +K G  A +    Y                      + P  +   N ++  +   V +++
Sbjct: 270 MKIGQPAELVSDLYGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIEL 329

Query: 394 TDLAFSDNNIELRNGFPAEVLFTA 417
                  + + +      +V  +A
Sbjct: 330 NREDVDRHPLRIGLSMTVKVDISA 353



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 56/161 (34%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV+I     G+++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 60  VVGRVVQITPQTGGMVRKVLHDDTDVVKKGDVLAVLDDGNYVLAYERAKNELIQAVRQNR 119

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           + +  T ++      ++ D+     + R    L   G   +     ++       +  ++
Sbjct: 120 QQNAATSQAGAQVALHRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 179

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 180 ALAEESSARAALGGQVALREQPAVQTAVSRLKDAWLNLQRT 220


>gi|291333760|gb|ADD93445.1| secretion protein HlyD [uncultured marine bacterium
           MedDCM-OCT-S04-C109]
          Length = 461

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/368 (12%), Positives = 107/368 (29%), Gaps = 52/368 (14%)

Query: 75  GSQIL-QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           G  +   G  L+ FED       DL+   +   +   D E+   +               
Sbjct: 40  GQTVQIPGALLVKFED------ADLRDKILHQEKAVADAERDLGNAKK------------ 81

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                 D   +   T S      +   +    +         L  L +E   +L    + 
Sbjct: 82  ------DLALRRIETASANRQAALDVEFSQQDLDRYIEGDTPLQLLKMEGDIALAEEEIK 135

Query: 194 SHQKDLTMMKNLFEK--------------NAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             ++ L   + L EK              +  ++     Q++       E  +     + 
Sbjct: 136 RAEEKLASTRKLREKVMRLHWKCRATNSPSRNNKQHYTDQKQQELFLKFEQPQQKKRYEA 195

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L            +    ++     + +       +  +L + ++   +  + +P  G 
Sbjct: 196 KLDQATVEQQRTIQKSNTLVESAEGTVLRRTEGLKAQQERLVLYKEQLVKSEMRAPQDGL 255

Query: 300 IVYNQSFS--------SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           ++Y +S S             ++   ++ + P         +V    ++H+K    A VR
Sbjct: 256 VIYARSSSRYNDTYIKEGALIRKGYSVIDL-PDISELMAVVQVHESFVRHIKTDQKAVVR 314

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
                D    +F  ++  + P    +    ++   Y+  + I D        +L+ G  A
Sbjct: 315 IDSLPDR---EFHGVVRHVAPTPDARRKYYESISVYDTHVWIQDENSQLPE-DLKPGVSA 370

Query: 412 EVLFTAKN 419
           +       
Sbjct: 371 KAEIIVAE 378


>gi|296134731|ref|YP_003641973.1| secretion protein HlyD family protein [Thiomonas intermedia K12]
 gi|295794853|gb|ADG29643.1| secretion protein HlyD family protein [Thiomonas intermedia K12]
          Length = 415

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 91/297 (30%), Gaps = 19/297 (6%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D  +       + L+   G       +     ++   R +++      ++       +  
Sbjct: 84  DADDTQLVKAGQPLVQLDGADTHVALQQAEAMLAQAVRQVRVSFANNGTLAAQVAVRQTD 143

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S+ +A L+  Q  L   + L    AV   +L Q +  V  +   L       K     +
Sbjct: 144 VSVAQANLAKAQDALRRRQELAGTGAVGAEELRQAQIAVQAAQAALTTAQAGVKAAQEQL 203

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                EA           S  L            KL       E+  I +P++G +V  +
Sbjct: 204 GS--GEALTAGTVIASNPSVKLAAA---------KLREAYLAYERTNIPAPVSG-VVARR 251

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA--DIREKK 362
           +           PLM +VP     +I A +   Q++ V+ G  ATV    Y         
Sbjct: 252 TVQLGQRVGPGLPLMWVVPLDD-VWIDANLKETQLRDVRIGQKATVTADTYGGSFTYTGH 310

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLF 415
              +        S       T  + +V+    +++        +  LR G   EV  
Sbjct: 311 VVGLSAGTGAAFSLLPAQNATGNWIKVVQRLPVRVALDPKQLASHPLRVGMSTEVSI 367



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/144 (11%), Positives = 45/144 (31%), Gaps = 7/144 (4%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSI-----LLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  A+ +R  +L  IG   ++  +         +  + +    +  + N+V++     G 
Sbjct: 22  NGKAAKRRRLMLLAIGFFVIVGAAYGGYHYWESLRYAYTDDAYV--QGNLVQVTPQVGGT 79

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +     ++   +  G PL+  +  +T   +   +  +      +    +    L  +  V
Sbjct: 80  VIAIDADDTQLVKAGQPLVQLDGADTHVALQQAEAMLAQAVRQVRVSFANNGTLAAQVAV 139

Query: 127 LEKAFESREEQLLDFLGKYHSTCS 150
            +      +  L            
Sbjct: 140 RQTDVSVAQANLAKAQDALRRRQE 163


>gi|238924741|ref|YP_002938257.1| hypothetical protein EUBREC_2392 [Eubacterium rectale ATCC 33656]
 gi|238876416|gb|ACR76123.1| hypothetical protein EUBREC_2392 [Eubacterium rectale ATCC 33656]
          Length = 525

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/381 (13%), Positives = 125/381 (32%), Gaps = 36/381 (9%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I       + +  V    Q+  G  LL ++    +  +++K++ I++L   + +EK  
Sbjct: 66  QTINLKDGQKVTEVYVTKDQQVKAGDKLLAYDVTSLSLSVEMKQLEIQSLENQLASEKQK 125

Query: 117 LDFLNNKYDVLEKA-----FESREEQLLDFLGKYHSTCSKVF-----NYGISSVYRSLKM 166
           LD L N   V ++       E + +   D   +       V        GI +       
Sbjct: 126 LDKLKNTKPVEKQPESPVTPEPQPDTQPDAPEQKPDEEHDVISDLSEAKGIGTEDDPYAF 185

Query: 167 KLTRMRSIYLNRLD-LENKSSLLRALL-SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
             T    +    L+ L +KS++ R ++  ++  D+ ++          ++D  +      
Sbjct: 186 TCTEASYVSGELLNTLADKSAVARFVIGDANAPDMELIVRGDRLGGYDESDEIKLFLAGT 245

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            +  +  ++    ++         ++     A+   E         +    E ++     
Sbjct: 246 TTAGDASDDTAGSESSDTKTASATEQTAQTEADTAAEEKTYTADELKDAIKEQTRSVADV 305

Query: 285 KTREQ------KTILSPIAGTIVYNQ----SFSSSNYAQQ---SQPLMKIVPHSKLTYIR 331
             +++      K + S +   +VY +      +  + A       P +++   +   YI 
Sbjct: 306 DLQKRIAQANLKELQSELEDGVVYAKKDGIVTTVCDPANPPKDGTPFLQLS-GASGLYIS 364

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ------QDNNLQTQE 385
             +    +  VK G +          +    ++  I +I  + S         N   +  
Sbjct: 365 GTIGELDLDTVKIGQSV----SAVNYMTGDTYEGTISEISNVPSDSVNYYGDSNPNSSFY 420

Query: 386 YYEVILKITDLAFSDNNIELR 406
            Y   ++        +++EL 
Sbjct: 421 EYTAYIENPQNLKKGDSLELT 441


>gi|134300891|ref|YP_001114387.1| secretion protein HlyD family protein [Desulfotomaculum reducens
           MI-1]
 gi|134053591|gb|ABO51562.1| secretion protein HlyD family protein [Desulfotomaculum reducens
           MI-1]
          Length = 353

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/360 (12%), Positives = 101/360 (28%), Gaps = 84/360 (23%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V  G Q+ +G  L   E               K L+  +   K A +      
Sbjct: 66  GRIDTLLVAEGDQVKKGAVLAALET--------------KELQAKLSQAKGAHEAALAAS 111

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E+A     +Q+   + + ++                  +K+   + +Y   ++L   
Sbjct: 112 RQAEEAVPLTSQQVETTIAQCNAKV------------EQATVKVRSAQQLYDRMVELHKA 159

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            ++  +       +    K   E+   +          V  S  +    + +       +
Sbjct: 160 GAISDSQFDDATNNYDAAKQQLEEAKAALAQAEAARLKVEVSQAQHDAAVGQANQAQGAV 219

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +E                                         E   + +P+ G I   +
Sbjct: 220 DE------------------------------------ASAYLENSKLKAPMNGFITQ-K 242

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTY---IRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                       P+ +I           ++  ++ K+I  V+ G    +R P + D   K
Sbjct: 243 YLEQGEMLNAGTPVFEI----TDLVNSYVKVFISEKKIGRVRLGQKVEIRVPAFPD---K 295

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEY------YEVILKITDLAFSDNNIELRNGFPAEVLF 415
            F+  +  I+            ++Y      +EV + +      + ++ L+ G  A V  
Sbjct: 296 VFEGKVVFINNAGEFAVKKAVNEQYQHDIRSFEVKIDVP-----NQDLLLKVGMTANVKI 350


>gi|330878801|gb|EGH12950.1| HlyD family secretion protein [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 387

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/423 (11%), Positives = 121/423 (28%), Gaps = 94/423 (22%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI----TWSI---LLPIEISVSSSGEILNEDNVVEIKSP 62
            R+    +    +   + + G++     W       PIE + ++      +     I   
Sbjct: 31  PRSTRKRVVSSVIFGAVALAGVLLVLYAWQFPPFASPIESTENAQ----VKGQTTLIGPQ 86

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG + +  V++   +  G  L+  +D        + +  +      +  + ++L     
Sbjct: 87  LSGYVYEVPVQDFQFVKAGDLLVRLDD-------RIYRQRLDQAVAQLAVQNASLANNLQ 139

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +    E     R+ +L + + +   + +                                
Sbjct: 140 QRRSAEATIGQRQAELQNSIAQSRKSAA-------------------------------- 167

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                          DL   + L    +VS+++L+  +    ++   + E          
Sbjct: 168 ---------------DLRRNQALVTDGSVSKSELDVTQAADAQANAAVAEAKAVLLIARE 212

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +  +           +   S +        A E++++       +   I++P  G +  
Sbjct: 213 DLQTVI----------VNRGSLEASVANAQAAIELARI-----DLDNTRIVAPRDGQLGQ 257

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP  +     A +   Q+ +V+ G   +            +
Sbjct: 258 IGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKETQMANVRLGQPVSFTVDALDGR---E 311

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVL 414
               +++I P    +      +  T  + ++  +I      D +      LR G    V 
Sbjct: 312 MHGHVQRISPAAGSEFSLLPADNATGNFVKISQRIPVRIVVDADQPMLEHLRPGMSVVVS 371

Query: 415 FTA 417
              
Sbjct: 372 IDT 374


>gi|297616431|ref|YP_003701590.1| secretion protein HlyD [Syntrophothermus lipocalidus DSM 12680]
 gi|297144268|gb|ADI01025.1| secretion protein HlyD family protein [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 357

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 55/361 (15%), Positives = 109/361 (30%), Gaps = 78/361 (21%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I  F V+ G ++  G  L T E  E    +   K +++  +  +   ++A+       
Sbjct: 69  GKIACFAVDEGDEVKPGQVLATLETDELKTQVAQAKAALEAAKVELIKAQNAVG------ 122

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                          G+S                     + E  
Sbjct: 123 ----------------------------LQSGVS----------------LSQVQEAEAA 138

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A L   +     +++L+   AVS  D ++ E     +   L +     +      
Sbjct: 139 VRQAQANLDICETTWKRIQDLYASGAVSAQDKDKAEAEYKAALARLAQAQAALEKAKSG- 197

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                    E    L E   D+   Q   A   +K           T+ S +AG +   +
Sbjct: 198 ---------ELQVTLSE--NDVAAAQAQVALAQAKYDEAVVYLNNATLKSTLAGIVT-LR 245

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                       P+++I       +++  V   +I  VK G  A V+   + +       
Sbjct: 246 LMEPGETVGAGTPVLRITDLKNT-WVKVFVGENRIGRVKPGTKAKVKVAAFDNREFG--- 301

Query: 365 AIIEKIDPIISQQDNNLQTQEY------YEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            +++ ++P            +Y      +EV + I      + ++EL+ G    V F+A 
Sbjct: 302 GVVKWVNPAGDFATQKAVNDQYDRDIRSFEVKVSIP-----NPDLELKTGMTETVRFSAD 356

Query: 419 N 419
            
Sbjct: 357 E 357


>gi|91226703|ref|ZP_01261392.1| putative secretion protein [Vibrio alginolyticus 12G01]
 gi|91189000|gb|EAS75283.1| putative secretion protein [Vibrio alginolyticus 12G01]
          Length = 341

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 71/223 (31%), Gaps = 24/223 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S+ +   +     + ++ + +         +        R+ L   Q +     +L ++ 
Sbjct: 86  SRPYLLAVKQAKAAYQLAVQQHDVADKQVTEAVAGLDAARSNLIEAQVEYKRTDSLVKRK 145

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             S  DL+  +  +  +   L +     +  + +  E   EA +      +    +L   
Sbjct: 146 LASNQDLDTAKNKLANAQASLEQARATVEKAIANRGEEGAEAAVVQQAGAQLAQAELN-- 203

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                                 I SP+ G      +    +     Q L  ++      +
Sbjct: 204 -----------------LSYTDITSPVDGIAGEINTH-VGSVVSVGQTLFPVI-LKDSYW 244

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +RA      + H+K G  A V    Y D+    +KA +E++ P
Sbjct: 245 VRANFKETDLTHIKPGMHADVVIDMYPDV---VWKATVEQLSP 284


>gi|320530697|ref|ZP_08031741.1| efflux transporter, RND family, MFP subunit [Selenomonas artemidis
           F0399]
 gi|320136984|gb|EFW28922.1| efflux transporter, RND family, MFP subunit [Selenomonas artemidis
           F0399]
          Length = 373

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 74/226 (32%), Gaps = 30/226 (13%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI----SRDLEQNQRTFADEMSKL 280
           ++   L    +E K            A     NYL  I     +DLE     +    S L
Sbjct: 88  QTVATLDGKDYEAKRDQAQYRVTNTRAKYNRMNYLAGIGAKSQQDLEDAAYNYDTAQSTL 147

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPK 337
                   +  I +PI+G +V     + +   Q S     +M+I        I+AKV   
Sbjct: 148 EEAVSDANETIITAPISGVVVGEPKTAGTMAVQGSDNPTVIMRIA-DLSRKQIKAKVDET 206

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE------------ 385
            I +++ G  AT     + D +   F A + KI         +  +              
Sbjct: 207 DIGNIRVGQDATFTVDAFTDQK---FTARVSKISQTDVSNSWDTSSSSSSSSSSSSASVI 263

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           YY V L + D         L     A V+    +   A  ++ P++
Sbjct: 264 YYYVTLDVDDPDSM-----LLPAMTARVVINTADK--ADALVVPLS 302



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 1/121 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+ +V ++G I   D+V E+ S  +  I    V+    +  G  + T +  +     D  
Sbjct: 47  IKSTVEATGTIQPVDSV-EVSSKITARISSVLVKENDTVTAGQTVATLDGKDYEAKRDQA 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  + N R   +               LE A  + +                +    IS 
Sbjct: 106 QYRVTNTRAKYNRMNYLAGIGAKSQQDLEDAAYNYDTAQSTLEEAVSDANETIITAPISG 165

Query: 160 V 160
           V
Sbjct: 166 V 166


>gi|237713566|ref|ZP_04544047.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229446288|gb|EEO52079.1| conserved hypothetical protein [Bacteroides sp. D1]
          Length = 303

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 91/256 (35%), Gaps = 39/256 (15%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         M+S+   R DL  + +  +  + + +++   ++NL    A +Q  L+ 
Sbjct: 72  QLYLKKLQLEASMKSVENQRPDLAKQIAATKQQIVTAERERKRVENLLAAGAANQKQLDD 131

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  V     +L       +N    + E  +   ++ A                      
Sbjct: 132 WDAQVKLLERQLVAQESSLRNSTNSLTEQGNSVAIQVAQ--------------------- 170

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E    +  + SPIAGT++  +   +   A   +PL K V      Y+RA +T +Q
Sbjct: 171 ----VEDQLAKCHVQSPIAGTVLA-KYAEAGELAAIGKPLFK-VGEVDRMYLRAYITSEQ 224

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV +  Y +  +K +   +  I              N +    Y V + +
Sbjct: 225 LSQVKLGDQVTV-YADYGNSEQKAYPGEVTWISDRSEFTPKTILTKNERANLVYAVKIAV 283

Query: 394 TDLAFSDNNIELRNGF 409
                  N+  L+ G 
Sbjct: 284 ------KNDGALKIGM 293


>gi|293406181|ref|ZP_06650107.1| multidrug resistance efflux pump [Escherichia coli FVEC1412]
 gi|291426187|gb|EFE99219.1| multidrug resistance efflux pump [Escherichia coli FVEC1412]
          Length = 394

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 102 RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 161

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 162 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 215

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 216 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 261

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 262 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 319

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 320 VQRLPVRIELDQKQLEQYPLRI 341



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 36  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 88

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 89  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 148

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 149 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 208

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 209 EVRNAWLALERT 220


>gi|269962201|ref|ZP_06176554.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833032|gb|EEZ87138.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 368

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 91/291 (31%), Gaps = 43/291 (14%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF--EKNAV 211
           ++ I+      K+K+            +  ++ L  AL++         + L   EK  V
Sbjct: 92  DHQIAVKQAEAKLKIAGQNVGSQMAGVMSAQAQLTTALVAQENAKRQGQRVLAMAEKGVV 151

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S++D +     + K+  ++       +     +    +E                     
Sbjct: 152 SKSDADTTRAAIDKANADVVNAKANLEKAKAQVGAAGEEN-------------------A 192

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                + +L   +    + T+ +P  G +      S   YA    PLM  V  S   ++ 
Sbjct: 193 QIQSALLELQQAQLNLSRTTMRAPSDGAVTNFNL-SQGAYATAGSPLMTFV-ESDGLWLE 250

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--------------PIISQQ 377
           A      + ++  G    +          + F   +  +D                +  Q
Sbjct: 251 AFFRENSMGNINAGDKVEI---ALDYAPGQTFSGTVSSVDLGVAWGANNQPGTLATVKNQ 307

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           +  L+  +   V +K+ D   +D    +R G  A+V+   ++  L   +  
Sbjct: 308 NGWLRDTQRMPVTIKLDDKHAAD---FMRIGGQADVVIYTESNALFNFLGK 355



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 78/213 (36%), Gaps = 11/213 (5%)

Query: 1   MHHFMWKNLKRNHPASL---KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVV 57
           M     +N     P  +   KR T   +   +  I  +I+   +  + ++  +  E NVV
Sbjct: 1   MSETAAENQVSQTPQPVNKVKRTTNALLALTMVSIGTAIVA--DRIIPTTDNVRVEGNVV 58

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            +    SG +    ++  +Q+ +G  LL     +    +   +  +K    ++ ++ + +
Sbjct: 59  SLIPQVSGQVDSVSIKPNTQVKKGGVLLQINTTDHQIAVKQAEAKLKIAGQNVGSQMAGV 118

Query: 118 DFLNNKY--DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                +    ++ +    R+ Q +  + +         +   +++ ++    +    ++ 
Sbjct: 119 MSAQAQLTTALVAQENAKRQGQRVLAMAEKGVVSKSDADTTRAAIDKANADVVNAKANLE 178

Query: 176 LNRLDL----ENKSSLLRALLSSHQKDLTMMKN 204
             +  +    E  + +  ALL   Q  L + + 
Sbjct: 179 KAKAQVGAAGEENAQIQSALLELQQAQLNLSRT 211


>gi|291522069|emb|CBK80362.1| Predicted permease [Coprococcus catus GD/7]
          Length = 1210

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 70/207 (33%), Gaps = 6/207 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E  +    ++   + L   +D + +A+     + D  + A      Q+   L +  +  S
Sbjct: 442 EQRNEAASQEKPDEALIAQLDAQIAAVQEQLTQLDAQKNALAEGISQVDGGLDQIEAGLS 501

Query: 151 KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
           ++      ++     L  +  ++   +    + + +     + L S ++ L   +   + 
Sbjct: 502 QIASGKEELNKQQEELNSQQAKLDETFNQLTEAKIQLDAGSSQLESGRQQLESKQQELDS 561

Query: 209 NAVS----QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
              +    +  L   +  + K   EL+  +   +       +   +A  E A+  ++ + 
Sbjct: 562 GKAALDQAKAQLQSGQAEIDKGKAELKSQMASAEAQFAEAEQKLTDAKSELADAKEKYAS 621

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKT 291
             ++ Q   AD   ++   E       
Sbjct: 622 GKKEAQEKIADAEKEIQDAEDQLADVD 648



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/173 (10%), Positives = 55/173 (31%), Gaps = 6/173 (3%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
                     D  E   +  + +L D   +  +          ++     + KL   ++ 
Sbjct: 218 DGAAAKQAYSDDYEAVVDKVKAKLEDISSEREAARYNGIMDDANAEIDDARDKLADAKAE 277

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
             + LD          +    Q+     K L +  A+ ++ +   +  +     EL++  
Sbjct: 278 AESELD-----DAWAQIQDGEQQISDGQKELDDNRAIYEDQIAAAKAKLSSGEQELQDGQ 332

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            E  +  + + E   +        L++ S+ L + ++ +   +      ++  
Sbjct: 333 AEIVSNEQKLQEGQTQIAAARQQ-LEDSSQTLAEKKQQYEAGLQAANAGQEQL 384


>gi|288819020|ref|YP_003433368.1| HlyD family secretion protein [Hydrogenobacter thermophilus TK-6]
 gi|288788420|dbj|BAI70167.1| HlyD family secretion protein [Hydrogenobacter thermophilus TK-6]
          Length = 373

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 66/164 (40%), Gaps = 3/164 (1%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           PI+  + +SG +    N V I+S  SG +K+ +V+ G ++ +G  L   +     + +  
Sbjct: 40  PIKKVIYASGYVKP-RNYVVIRSEVSGYVKEIRVKEGDKVRKGEILAVMDAGPVEESLRE 98

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYG 156
            +  ++  +  +  +      L  + ++ ++  E  +  L   + L +      + +   
Sbjct: 99  AQERLRLSQERLREDSDYRRSLEKQVEITKRNMEQAQRYLFRRESLAQRGLIPREQYEEA 158

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             S   +       + +   +   LE++   L A +   +K+L 
Sbjct: 159 KRSYENAKSEYEKALTTYRDSIKALESEERFLSASVERIKKELD 202



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/273 (11%), Positives = 84/273 (30%), Gaps = 45/273 (16%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L++   R+R     R  LE +  + +  +   Q+ L   ++L ++  + +
Sbjct: 93  EESLREAQERLRLSQERLREDSDYRRSLEKQVEITKRNMEQAQRYLFRRESLAQRGLIPR 152

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
               + +R    +  E  + +   ++ +                      + LE  +R  
Sbjct: 153 EQYEEAKRSYENAKSEYEKALTTYRDSI----------------------KALESEERFL 190

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYI 330
           +  + ++    K  ++  I SPI G ++ N+      Y         L  +        +
Sbjct: 191 SASVERIK---KELDKYYIKSPINGVVL-NKYVEVGEYINHISQDNKLFSVGESDAKEIV 246

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V  +    +K G    +    Y       F+  +  I+  I++    L+     + +
Sbjct: 247 -LNVDEEYASSIKSGMKVYISLDVYPGR---VFEGRLVLIEGEINKNKKTLEV----KAV 298

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
             +     ++           E     ++    
Sbjct: 299 ADLPPEVPANA--------TVEANILVEDRKAL 323


>gi|293370239|ref|ZP_06616799.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CMC 3f]
 gi|299146206|ref|ZP_07039274.1| putative ABC transport system, lipoprotein [Bacteroides sp. 3_1_23]
 gi|292634736|gb|EFF53265.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Bacteroides ovatus SD CMC 3f]
 gi|298516697|gb|EFI40578.1| putative ABC transport system, lipoprotein [Bacteroides sp. 3_1_23]
          Length = 309

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 91/256 (35%), Gaps = 39/256 (15%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         M+S+   R DL  + +  +  +++ +++   ++NL    A +Q  L+ 
Sbjct: 80  QLYLKKLQLEASMKSVESQRPDLAKQIAATKQQIATAEREKKRVENLLAAGAANQKQLDD 139

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  V     +L       +N    + E  +   ++ A                      
Sbjct: 140 WDAQVKLLERQLVAQESSLQNSTNSLIEQGNSVAIQVAQM-------------------- 179

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                E    +  + SPI GT++  +   +   A   +PL K V      Y+RA +T +Q
Sbjct: 180 -----EDQLAKCHVQSPIEGTVLA-KYAEAGELAAIGKPLFK-VAEVDRMYLRAYITSEQ 232

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV +  Y +  +K +  ++  I              N +    Y V + +
Sbjct: 233 LSQVKLGDEVTV-YADYGNSEQKAYPGVVTWISDRSEFTPKTILTKNERANLVYAVKIAV 291

Query: 394 TDLAFSDNNIELRNGF 409
                  N+  L+ G 
Sbjct: 292 ------KNDGALKIGM 301


>gi|253998931|ref|YP_003050994.1| RND family efflux transporter MFP subunit [Methylovorus sp. SIP3-4]
 gi|313201034|ref|YP_004039692.1| RND family efflux transporter MFP subunit [Methylovorus sp. MP688]
 gi|253985610|gb|ACT50467.1| efflux transporter, RND family, MFP subunit [Methylovorus sp.
           SIP3-4]
 gi|312440350|gb|ADQ84456.1| efflux transporter, RND family, MFP subunit [Methylovorus sp.
           MP688]
          Length = 411

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 69/217 (31%), Gaps = 21/217 (9%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA----NYLKE 261
            EK  V   +L+        +  E      +    L   NE    +  +        L +
Sbjct: 84  VEKGQV-LLELDDALFSAQIAQSEGNVRNAQASLDLAKANEARIRSLFQQEYVSRQELDQ 142

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPL 318
             + L+  Q       ++L   +       I SP++G +V  ++         S     L
Sbjct: 143 AVQALKSAQANLYTIQAQLRRDQTNLGYSIIRSPVSGVVVD-RAVDVGQTVAASLQTPTL 201

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + I        I        I ++K+G  A      + +     F+ +++++    +   
Sbjct: 202 ITIAQDLSKMQINTSFAEADIGNIKEGQAAKFAVDAFPNRN---FEGVVKQLRLNPTTTS 258

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           N +     Y V++ +      + +  L  G  A V  
Sbjct: 259 NVVT----YNVVISVD-----NPDQTLLPGMTAYVNI 286



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 71/167 (42%), Gaps = 4/167 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E SVS++G +     +V + +  SG I K  V+   ++ +G  LL  +D   +  I   
Sbjct: 47  VEQSVSANGTLNPVT-LVNVGTQVSGRISKLYVDFNDKVEKGQVLLELDDALFSAQIAQS 105

Query: 100 KVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + +++N +  +D     ++ +  L  +  V  +  +   + L       ++  +++    
Sbjct: 106 EGNVRNAQASLDLAKANEARIRSLFQQEYVSRQELDQAVQALKSAQANLYTIQAQLRRDQ 165

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +  Y  ++  ++ +       +     +SL    L +  +DL+ M+
Sbjct: 166 TNLGYSIIRSPVSGVVVDRAVDVGQTVAASLQTPTLITIAQDLSKMQ 212


>gi|15893610|ref|NP_346959.1| membrane permease, cation efflux pumps [Clostridium acetobutylicum
           ATCC 824]
 gi|15023162|gb|AAK78299.1|AE007546_5 Membrane permease, predicted cation efflux pumps [Clostridium
           acetobutylicum ATCC 824]
 gi|325507732|gb|ADZ19368.1| Membrane permease, predicted cation efflux pumps [Clostridium
           acetobutylicum EA 2018]
          Length = 392

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 73/196 (37%), Gaps = 18/196 (9%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           +   +++ +  +Q+     +     + N+  A    +  +     Q       + LT  E
Sbjct: 91  QVIGKVQSDTIDQQVSKSSLTVQQQQLNVNNAKTDDDKQKQ----QLILESNENDLTSAE 146

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           + + + T+ +PI G +V   + S  + AQQ + L+ I   +    I   +    I  V+ 
Sbjct: 147 EQQSKMTLTAPIGGLVVAKNNNS-GDTAQQGKALITIA-DTSSLKINLSIDELDISKVQV 204

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G  A ++F   +          ++ I  + +  +N       Y V+L +      + +  
Sbjct: 205 GQKADIKFEAISGKTY---SGTVQAISQLGATTNNVTT----YSVVLNVD-----NADAA 252

Query: 405 LRNGFPAEVLFTAKNT 420
           ++ G  A V     + 
Sbjct: 253 IKLGMSANVDIKVASK 268



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 59/166 (35%), Gaps = 10/166 (6%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I+++VS +G +       ++ +  +G I+   V  G  +  G  +   +       + 
Sbjct: 48  SNIDVTVSGTGTV-AAAQTKDVVANNAGTIENLDVNVGDTVTSGQVIGKVQSDTIDQQVS 106

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              ++++  + +++  K+     ++     +   ES E  L     +           G+
Sbjct: 107 KSSLTVQQQQLNVNNAKT-----DDDKQKQQLILESNENDLTSAEEQQSKMTLTAPIGGL 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +      +     +   D    +S L+  LS  + D++ ++
Sbjct: 162 VVAKNNNSGDTAQQGKALITIAD----TSSLKINLSIDELDISKVQ 203


>gi|213964234|ref|ZP_03392467.1| periplasmic component of efflux system [Capnocytophaga sputigena
           Capno]
 gi|213953124|gb|EEB64473.1| periplasmic component of efflux system [Capnocytophaga sputigena
           Capno]
          Length = 409

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 72/220 (32%), Gaps = 19/220 (8%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL--KEI 262
            +K   +++ D    + +V  +T   +  ++E     ++        N +  +    ++ 
Sbjct: 82  VKKGQLLAELDKTNLQEMVVNATANYQSAVNELNYYRQNYERQQKMYNAQVISQQDYEQA 141

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLM 319
                  +   A  ++ L   +       I SPI G I+  +          S     L 
Sbjct: 142 LYQFNNAKTNVAQRLTTLNQAKTNLGYANIYSPIDGIILSKEV-EEGQTVAASMSAPTLF 200

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           KI    K   +   V    I  VK G   +     Y      +F   + ++  +     +
Sbjct: 201 KIAKDIKRMQVEVNVDEADIGQVKVGQRVSFTVDAYPQE---EFVGRVTQV-RLSPTTSS 256

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           N+ T   Y VI++       + + +L+ G  A +      
Sbjct: 257 NVVT---YTVIVE-----AENPDEKLKPGLTATIAIYTNE 288



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 67/175 (38%), Gaps = 1/175 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS++G +   D V E+ +  SG++ K  V+  SQ+ +G  L   +     +++     + 
Sbjct: 49  VSATGSVQPVDEV-EVGTQVSGLVSKIYVDYNSQVKKGQLLAELDKTNLQEMVVNATANY 107

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           ++    ++  +   +     Y+    + +  E+ L  F     +   ++     +     
Sbjct: 108 QSAVNELNYYRQNYERQQKMYNAQVISQQDYEQALYQFNNAKTNVAQRLTTLNQAKTNLG 167

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                + +  I L++   E ++        +  K    +K +  +  V + D+ Q
Sbjct: 168 YANIYSPIDGIILSKEVEEGQTVAASMSAPTLFKIAKDIKRMQVEVNVDEADIGQ 222


>gi|168492332|ref|ZP_02716475.1| transport protein ComB [Streptococcus pneumoniae CDC0288-04]
 gi|225860084|ref|YP_002741593.1| transport protein ComB [Streptococcus pneumoniae Taiwan19F-14]
 gi|183573457|gb|EDT93985.1| transport protein ComB [Streptococcus pneumoniae CDC0288-04]
 gi|225727907|gb|ACO23758.1| transport protein ComB [Streptococcus pneumoniae Taiwan19F-14]
          Length = 449

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/439 (10%), Positives = 146/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQGGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV------SQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               + +  +    +L  +N         ++   +  +   ++  ++   I + ++ L  
Sbjct: 189 RDYQTAKSAIETGASLAGQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 244 INELY--------------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               Y               +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGTLLAQLYPSLEREGKAKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|13476801|ref|NP_108370.1| efflux pump protein FarA [Mesorhizobium loti MAFF303099]
 gi|14027562|dbj|BAB53831.1| efflux pump protein; FarA [Mesorhizobium loti MAFF303099]
          Length = 360

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 105/318 (33%), Gaps = 29/318 (9%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            ++   K ++        V     + +  +  D L        ++      +   + ++ 
Sbjct: 46  ANLQQAKVSIASDTAGRIVQVAITDHQMVKQGDLLFTIDPEPYRIALAQADAAVAAARLN 105

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           + ++R+ Y   +  E  +S   + +   Q       +L +K   +++ L+Q    + K+ 
Sbjct: 106 VEQLRAAYSQSMAQEKSAS---SEVDYAQSQYDRAADLAQKGINAKSSLDQARNDLDKAK 162

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            ++      Q+ ++     L    ++E                 T    ++         
Sbjct: 163 QQVA---VAQQGIISAKAALGGNPDIE------------TDKHPTVMAALAARDKAAYDL 207

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            + T+ +P  G I    SF    +     PL  +V      +I A     Q+ ++K G  
Sbjct: 208 ARTTVKAPADGVISQASSFKVGQFVGSGTPLFSLVESDDT-WIDANFKETQLTNMKPGQK 266

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSD 400
           A +    Y     K F+A ++ I      +         T  + +V  +I    +L   D
Sbjct: 267 AEIVVDTYP---GKTFEATVKAIGAGTGAEFSLLPAQNATGNWVKVTQRIPVRLELTDPD 323

Query: 401 NNIELRNGFPAEVLFTAK 418
             + LR G  A V     
Sbjct: 324 AKMALRTGMSASVTVDTG 341



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 62/188 (32%), Gaps = 9/188 (4%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M        KR        + L + + I G   W      + + +++     +   V I 
Sbjct: 1   MEPVPAPKKKRRTGRFFLMLALPAALVIGGGYIWVTGGRYQETENAN----LQQAKVSIA 56

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S  +G I +  + +   + QG  L T +       +     ++   R +++  ++A    
Sbjct: 57  SDTAGRIVQVAITDHQMVKQGDLLFTIDPEPYRIALAQADAAVAAARLNVEQLRAA---- 112

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                + ++   S E           +  ++      SS+ ++        + + + +  
Sbjct: 113 -YSQSMAQEKSASSEVDYAQSQYDRAADLAQKGINAKSSLDQARNDLDKAKQQVAVAQQG 171

Query: 181 LENKSSLL 188
           + +  + L
Sbjct: 172 IISAKAAL 179


>gi|317152842|ref|YP_004120890.1| RND family efflux transporter MFP subunit [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316943093|gb|ADU62144.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 589

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 99/300 (33%), Gaps = 41/300 (13%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D +E+          + + K     ++       ++         +   +   +  L   
Sbjct: 255 DSVERGQTLLVLDTAEMVAKVREARAEYIKAKKKTLE---LEGWEKTPDVSKAKRSLNQA 311

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             LLR   +   +D    K L+E+  + +++ +   + V    ++   ++   ++ L   
Sbjct: 312 KGLLRQAENKASED----KTLYEQGIIPKSEYDSSVQDVGDKKMQYFSSLESLQSTLGKG 367

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI---- 300
           +  Y E                   +    +  +K+   E+  EQ  I +P++G      
Sbjct: 368 DAEYLEI-----------------ARMELDNAEAKMKAAEEKLEQAEIKAPVSGIAIRPS 410

Query: 301 ---VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
                 ++  +     + Q L+ I    +   I  +V    I  ++KG    V    + D
Sbjct: 411 AKDKDAKNVETGMSVAEGQALLSIG-SLEGLSITTEVDELDINSLEKGQPVLVSGDAFPD 469

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           I+    K +I +I         N      +   +++ DL   D   ++R G  A +    
Sbjct: 470 IQ---LKGLIAQISS-----QANEGQVPTFTTTIRLRDL-PDDVGKQVRLGMTANMQVQT 520


>gi|213968857|ref|ZP_03396998.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato T1]
 gi|301384096|ref|ZP_07232514.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|302059170|ref|ZP_07250711.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato K40]
 gi|213926460|gb|EEB60014.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato T1]
          Length = 387

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/423 (11%), Positives = 121/423 (28%), Gaps = 94/423 (22%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI----TWSI---LLPIEISVSSSGEILNEDNVVEIKSP 62
            R+    +    +   + + G++     W       PIE + ++      +     I   
Sbjct: 31  PRSTRKRVVSSVIFGAVALAGVLLVLYAWQFPPFASPIESTENAQ----VKGQTTLIGPQ 86

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG + +  V++   +  G  L+  +D        + +  +      +  +K++L     
Sbjct: 87  LSGYVYEVPVQDFQFVKAGDLLVRLDD-------RIYRQRLDQALAQLAVQKASLANNLQ 139

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +    E     R+ +L + + +   + +                                
Sbjct: 140 QRRSAEATIGQRQAELQNSIAQSRKSAA-------------------------------- 167

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                          DL   + L    +VS+++L+       ++   + E          
Sbjct: 168 ---------------DLRRNQALVTDGSVSKSELDVTRAADAQANAAVAEAKAVLLIARE 212

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +  +           +   S +        A E++++       +   I++P  G +  
Sbjct: 213 DLQTVI----------VNRGSLEASVANAQAAIELARI-----DLDNTRIVAPRDGQLGQ 257

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP  +     A +   Q+ +V+ G   +            +
Sbjct: 258 IGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKETQMANVRLGQPVSFTVDALDGR---E 311

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVL 414
               +++I P    +      +  T  + ++  +I      D +      LR G    V 
Sbjct: 312 MHGHVQRISPAAGSEFSLLPADNATGNFVKISQRIPVRIVVDADQPMLEHLRPGMSVVVS 371

Query: 415 FTA 417
              
Sbjct: 372 IDT 374


>gi|167769471|ref|ZP_02441524.1| hypothetical protein ANACOL_00805 [Anaerotruncus colihominis DSM
           17241]
 gi|167668439|gb|EDS12569.1| hypothetical protein ANACOL_00805 [Anaerotruncus colihominis DSM
           17241]
          Length = 584

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 87/257 (33%), Gaps = 21/257 (8%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+I   ++V  +    SG + +   E G  +  G  L T +D +     ++ + S +   
Sbjct: 93  GKIEPSESV-NVYPEISGKVSEIYFEAGDTVQAGDLLFTLDDTDAALSYEMAQASYEQKV 151

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
              DT    L        +  KA     +Q L+         +  ++  + +  +     
Sbjct: 152 ISADT---TLGSSYESKLLSAKAQLDSAQQSLNNARLKLKDYNDGYDDSLINAEKRRDEA 208

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
            T M++      D +N  +     L     + T  +   ++  + ++++N+ E       
Sbjct: 209 ETAMKAAEQAYEDAKNDPNTDEDTLKDLLAEFTKAE---QEYLLLRSEINELE------- 258

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS----KLTIL 283
                   E +++                NY   +   LE  QR    E+      L   
Sbjct: 259 ---DSEDSEARDLRNSYKNAQTSYEQALENYNLLLGGSLEDTQRATEAELKSAQLSLEQS 315

Query: 284 EKTREQKTILSPIAGTI 300
             T ++  + SPI+G I
Sbjct: 316 AATLDKYKVYSPISGVI 332


>gi|220926528|ref|YP_002501830.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
 gi|219951135|gb|ACL61527.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
          Length = 393

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/363 (12%), Positives = 100/363 (27%), Gaps = 82/363 (22%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V NG  +  G  +   +D               + R  +   +  L    + 
Sbjct: 79  SGYLDAVPVVNGQAVKAGEVIARIDD--------------GDYRLALKAAEDKLATQRST 124

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              + +  E+   Q+     +  +  +            S++      R + L + +   
Sbjct: 125 IARIARQVEAARAQVAQGEAQIDAARAD-----------SVRAAADYQRQMQLAQSEFAA 173

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           ++ L +A                      + D ++ E  V  +  +L         +   
Sbjct: 174 RARLEQA----------------------RADRDRSEANVKAAEAQLLAAKANVAVLEAQ 211

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             E                   L     T AD  ++            + +P  G I  N
Sbjct: 212 AKEAES----------------LAAELGTAADRAAR------DLSFTVLRAPFDGVI-GN 248

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++  +  Y      +  +VP      + A     Q+  ++ G    +R   + D      
Sbjct: 249 KAVEAGAYVAPGSRIAALVPLES-VRVDANFKETQLARMRVGQPVHIRVDAWPDR---DI 304

Query: 364 KAIIEKIDPII----SQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLF 415
              +E + P      S    +  T  + +++    +++   A       LR G       
Sbjct: 305 LGTVESLSPASGSVFSLLPPDNATGNFTKIVQRLPVRVRVPAEVAREGLLRPGLSVVARV 364

Query: 416 TAK 418
             +
Sbjct: 365 DTR 367


>gi|148993881|ref|ZP_01823264.1| competence factor transport protein ComB [Streptococcus pneumoniae
           SP9-BS68]
 gi|168489483|ref|ZP_02713682.1| transport protein ComB [Streptococcus pneumoniae SP195]
 gi|147927588|gb|EDK78614.1| competence factor transport protein ComB [Streptococcus pneumoniae
           SP9-BS68]
 gi|183572111|gb|EDT92639.1| transport protein ComB [Streptococcus pneumoniae SP195]
 gi|332075709|gb|EGI86176.1| bacteriocin secretion accessory family protein [Streptococcus
           pneumoniae GA17570]
          Length = 449

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/439 (10%), Positives = 146/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   I     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATIEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV------SQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               + +  +    +L  +N         ++   +  +   ++  ++   I + ++ L  
Sbjct: 189 RDYQTAKSAMETGASLASQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 244 INELY--------------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               Y               +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|332829906|gb|EGK02534.1| hypothetical protein HMPREF9455_00784 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 360

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 63/211 (29%), Gaps = 19/211 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +S +D+  ++  V     E        +        L  + ++     L+++S       
Sbjct: 91  ISSDDILAKKAQVQAMITEAEAASKNAQRDYERFKTLRSQNSVSDKE-LEDVSLQNTSMN 149

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                   ++  +        I +P +G +   +     + A    P++ I   S    I
Sbjct: 150 AKVQMARQQMNEINAMLSYTNIRAPFSGVVTQ-KMLDEGSMANPGMPILTI-EQSGELQI 207

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A +    I +VK G  A +                + ++ P   +          Y + 
Sbjct: 208 VASIPENYIPYVKIGDVAKIELKSLGTT----IDGKVSELSPSAFRTGGQ------YSMK 257

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF--TAKN 419
           L I     + +   +R+G    +L       
Sbjct: 258 LAID----AKDKTNIRSGMYVNILIPNKTGE 284



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 4/94 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I K  V+ G ++  G  L++     ++D I  KK  ++ +    +           ++
Sbjct: 69  GYITKIYVKPGDKVASGQLLVSI----SSDDILAKKAQVQAMITEAEAASKNAQRDYERF 124

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             L       +++L D   +  S  +KV      
Sbjct: 125 KTLRSQNSVSDKELEDVSLQNTSMNAKVQMARQQ 158


>gi|189345625|ref|YP_001942154.1| secretion protein HlyD family protein [Chlorobium limicola DSM 245]
 gi|189339772|gb|ACD89175.1| secretion protein HlyD family protein [Chlorobium limicola DSM 245]
          Length = 331

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 84/300 (28%), Gaps = 28/300 (9%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +E      E  +   + +      +V       V +   + L       + R   E    
Sbjct: 52  VETDNAQIEGDIYPVISRVPGRVQQVLCSDNQKVAKGDTLVLLDPADYEVRRDMAEAALD 111

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             RA +S+  +       + +K +          R    S  E                 
Sbjct: 112 NARASVSAAGEAALAAAAIGQKLSADLRRSENLRRQDVISPSEFDAVKAGALTSSAQHAA 171

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +     A                     ++L          TI +P  G +      
Sbjct: 172 AESQHRAAAAQ---------------LKMREAELRNAGLQLSYTTITAPADGHVSKKNV- 215

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
               Y    Q L+ +V  SK  ++ A     Q+++++ G   +++   Y     K+F+  
Sbjct: 216 QPGQYVAPGQQLIALV-GSKKLWVVANFKETQLENIRPGQPVSIKVDAYP---GKEFEGE 271

Query: 367 IEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +E I      +      +  +  + +V     ++I      DN  +L  G    V    K
Sbjct: 272 VESISSGTGARFALLPPDNASGNFVKVAQRVPVRILFTGKPDNEHKLAAGMNVVVEIRVK 331



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 43/141 (30%), Gaps = 2/141 (1%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E ++  + S   G +++    +  ++ +G  L+  +  +     D+ + ++ N R  +  
Sbjct: 60  EGDIYPVISRVPGRVQQVLCSDNQKVAKGDTLVLLDPADYEVRRDMAEAALDNARASVSA 119

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
              A          L    + R  + L        +       G  +         ++ R
Sbjct: 120 AGEAALAAAAIGQKLSA--DLRRSENLRRQDVISPSEFDAVKAGALTSSAQHAAAESQHR 177

Query: 173 SIYLNRLDLENKSSLLRALLS 193
           +        E +       LS
Sbjct: 178 AAAAQLKMREAELRNAGLQLS 198


>gi|293415936|ref|ZP_06658576.1| multidrug resistance protein A [Escherichia coli B185]
 gi|291432125|gb|EFF05107.1| multidrug resistance protein A [Escherichia coli B185]
          Length = 394

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 102 RQTFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 161

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 162 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 215

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 216 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 261

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 262 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 319

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 320 VQRLPVRIELDQKQLEQYPLRI 341



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 36  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 88

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 89  EGDVLVTLDPTDARQTFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 148

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 149 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 208

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 209 EVRNAWLALERT 220


>gi|289524022|ref|ZP_06440876.1| efflux transporter, RND family, MFP subunit [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289502678|gb|EFD23842.1| efflux transporter, RND family, MFP subunit [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 384

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 68/220 (30%), Gaps = 25/220 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD------- 265
           +  + Q +  + ++   L+       +  R+++        +        S         
Sbjct: 94  EAQVEQAKANLMQAKAGLQRAQATLADAKRNLDRQKMLWERDLIARSDLDSAQTNYDLAV 153

Query: 266 --LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMK 320
             + +         + L  +E       I SP+ G +V  +          S     L  
Sbjct: 154 AGVSEADANVLQAQASLKKVETDLGYTRIYSPVDGIVVS-RDVDVGQTVAASFQTPTLFT 212

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           I        I   V    I  VK+G + T     Y +     F   I+++  I S    N
Sbjct: 213 IAQDLTKMQIETNVDEADIGEVKEGLSVTFTVDAYPNAI---FSGRIKQV-RIASSVVEN 268

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + T   Y VI+ ++     + ++ L+ G  A V       
Sbjct: 269 VVT---YPVIIDVS-----NPDLMLKPGMTANVTIITDKK 300



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 58/179 (32%), Gaps = 26/179 (14%)

Query: 23  LSIIGIIGLITWSILLP--------------------IEISVSSSGEILNEDNVVEIKSP 62
           +  + +IG + ++                        I   V++ G +     V E+ + 
Sbjct: 5   MLFVLVIGAVLFAAFGRGFFSRKEGVYYDMAPVERCDISSFVTAIGNVSAVTTV-EVGTQ 63

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I++  V+  S + +G  +   +       ++  K ++   +  +   ++ L     
Sbjct: 64  VSGTIREIYVDYNSIVNKGQIIALIDPTTFEAQVEQAKANLMQAKAGLQRAQATLADAKR 123

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
             D  +  +E       D       +    ++  ++ V  +    L    S+     DL
Sbjct: 124 NLDRQKMLWERDLIARSDL-----DSAQTNYDLAVAGVSEADANVLQAQASLKKVETDL 177


>gi|261416414|ref|YP_003250097.1| efflux transporter, RND family, MFP subunit [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|261372870|gb|ACX75615.1| efflux transporter, RND family, MFP subunit [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|302328128|gb|ADL27329.1| efflux transporter, RND family, MFP subunit [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 432

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 76/222 (34%), Gaps = 19/222 (8%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN--YLKEI 262
            +K   +++ D ++ +  + ++T+  +   ++        + +   A  + A+   L++ 
Sbjct: 86  VKKGQVIAELDKSKLQSTLKQATISYKSAENDLNYKQSTYDRIKKLAASKSASAVELEQA 145

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLM 319
             +L   + +     +++          TI SPI G ++  ++         S     L 
Sbjct: 146 EYNLNAAKLSLEQRKNEVAQARLNLSYATIKSPIDGVVLK-RAVDVGQTVAASMSTPTLF 204

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I        + A V    I  VK+G   T     + +     F   ++++    +   N
Sbjct: 205 VIAKDLSQMKVMADVDEADIGQVKQGQRVTFTVDAFQNDT---FHGTVQEVRLNPTTTSN 261

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +     Y V++   +        +L  G  A      +  T
Sbjct: 262 VVT----YTVVITAENPEQ-----KLLPGMTATCTIVTQEIT 294



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 73/186 (39%), Gaps = 4/186 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+ ++S++G +   D V E+ +  SG I K  V+  S++ +G  +   +  +    +   
Sbjct: 49  IKTTISATGSLEPVDQV-EVGTQVSGDIAKINVDFNSKVKKGQVIAELDKSKLQSTLKQA 107

Query: 100 KVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            +S K+    ++ ++S  D    L           E  E  L           ++V    
Sbjct: 108 TISYKSAENDLNYKQSTYDRIKKLAASKSASAVELEQAEYNLNAAKLSLEQRKNEVAQAR 167

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           ++  Y ++K  +  +       +     +S+    L    KDL+ MK + + +      +
Sbjct: 168 LNLSYATIKSPIDGVVLKRAVDVGQTVAASMSTPTLFVIAKDLSQMKVMADVDEADIGQV 227

Query: 217 NQQERI 222
            Q +R+
Sbjct: 228 KQGQRV 233


>gi|222085432|ref|YP_002543962.1| multidrug resistance efflux system protein [Agrobacterium
           radiobacter K84]
 gi|221722880|gb|ACM26036.1| multidrug resistance efflux system protein [Agrobacterium
           radiobacter K84]
          Length = 354

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 58/418 (13%), Positives = 129/418 (30%), Gaps = 88/418 (21%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           + R   + ++ + +L+ +G + L+ ++  L P + SV ++ +   +  V  I    SG I
Sbjct: 1   MSRLVRSPIEVIAVLAGVGGVMLVLYAWHLPPFKSSVETTDDAYVKGYVTTISPQVSGYI 60

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               +++   + QG  L   +D        + +  +   R  +  +K+AL     +    
Sbjct: 61  TDVPIKDYKLVKQGEVLTKIDD-------RIYQQKVAQARATLAGQKAALANSQQQEQAA 113

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +    S + Q+           +++    ++++        +            +   + 
Sbjct: 114 KAGIASSQAQIDSANAALK--RAQLAADRVTTLVAKGVSTTSDSEQAQATLQQAQASVNQ 171

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A L   Q++LT +                   IV +++LE   +  E    L  I   
Sbjct: 172 AKAALDVSQQNLTTI-------------------IVNRASLEAGVSGAEAAVQLAEI--- 209

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                                                   +  TI++P  G +       
Sbjct: 210 --------------------------------------DLQNATIVAPQDGRVGEVGVR- 230

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Y      LM +VP     ++ A     Q+  +K    AT+        +    K  +
Sbjct: 231 LGQYVTAGTQLMGLVPKD--IWVIANFKETQLDGMKIDQPATISVDALGHRQ---LKGHV 285

Query: 368 EKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDNNIELRNGFPAEVLF 415
           ++  P    +      +  T  + +      V +KI       ++  L  G    V  
Sbjct: 286 QRFSPAAGSEFAVIKPDNATGNFTKVAQRIGVRIKIDKDQPLADD--LAPGMSVVVSI 341


>gi|27381369|ref|NP_772898.1| multidrag resistance protein [Bradyrhizobium japonicum USDA 110]
 gi|27354536|dbj|BAC51523.1| bll6258 [Bradyrhizobium japonicum USDA 110]
          Length = 380

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 90/314 (28%), Gaps = 26/314 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++A   +N +          R+ + +           + +   +      L     ++ S
Sbjct: 70  RAAKVTINARVSGQAVEIAVRDNERVRRGQVLFRIDPEPYQIAVDQAEARLGSARLQIDS 129

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +       + +    R   S  +++    K L   +   +    + E  +  +   +   
Sbjct: 130 LKATHRQQQAELQSARESASFDEREFDRKKMLVASDFTPRAVYERAETDLKVARHRMASI 189

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +  N +  +N   D                      T     ++L          T++
Sbjct: 190 EQQIANTVVALNGDPDID---------------ADRHPTVRAARAQLDRARLDLSYATVI 234

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +          +     P   ++  S+  +I A      + H++ G  AT+   
Sbjct: 235 APDDGIVTKVDDLQIGGFVNAGAPTFSLM-SSRDIWIEANFRETGLTHMRPGQEATIDVD 293

Query: 354 HYADIREK-------KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            Y D + +               + P  +   N ++  +   V L++ DL   D    L 
Sbjct: 294 AYPDRKFRAHIVSMSPGTGSDFSVLPPENATGNWVKVVQRLPVRLELDDL---DPTRPLF 350

Query: 407 NGFPAEVLFTAKNT 420
           +G          + 
Sbjct: 351 SGISVTARVDTGHR 364



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 77/225 (34%), Gaps = 16/225 (7%)

Query: 15  ASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
             L+R  +L++  ++     +  L        S+ +       V I +  SG   +  V 
Sbjct: 33  RRLRRPLMLALPTVVAVFGAFMYLAQ--EQYVSTDDAFVRAAKVTINARVSGQAVEIAVR 90

Query: 74  NGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +  ++ +G  L   +         +    +   ++ I +L+     +++ L         
Sbjct: 91  DNERVRRGQVLFRIDPEPYQIAVDQAEARLGSARLQIDSLKATHRQQQAELQSARESASF 150

Query: 127 LEKAFESREEQLLD-----FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            E+ F+ ++  +        + +   T  KV  + ++S+ + +   +  +        D 
Sbjct: 151 DEREFDRKKMLVASDFTPRAVYERAETDLKVARHRMASIEQQIANTVVALNGDPDIDADR 210

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIVYK 225
                  RA L   + DL+    +  +   V++ D  Q    V  
Sbjct: 211 HPTVRAARAQLDRARLDLSYATVIAPDDGIVTKVDDLQIGGFVNA 255


>gi|225855832|ref|YP_002737343.1| transport protein ComB [Streptococcus pneumoniae P1031]
 gi|225725634|gb|ACO21486.1| transport protein ComB [Streptococcus pneumoniae P1031]
          Length = 449

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/439 (11%), Positives = 145/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV--------SQND---------LNQQERIVYKSTLELRE 232
               + +  +    +L  +N          SQ +         + Q E  + +    L  
Sbjct: 189 RDYQTAKSAIETGASLAGQNLAYSFYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 233 NIHEQKN---MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              +         + + L  +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|171915931|ref|ZP_02931401.1| Secretion protein HlyD family [Verrucomicrobium spinosum DSM 4136]
          Length = 390

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/374 (12%), Positives = 102/374 (27%), Gaps = 78/374 (20%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E +V  + S  +G I+   VE+  ++  G PL   +               ++    + +
Sbjct: 87  EADVHPVSSRVAGNIQSVLVEDNQKVEAGQPLAQLDP--------------RDYEMKLQS 132

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            ++AL+    +    E A    +        + +++ +++  Y +          LT   
Sbjct: 133 ARTALEQAAAQVPQAEAALAQAQAISAQTEAQVNASAAQLEKYRLDFDRAQKLRNLTG-- 190

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                                                A+S  D +  +     +      
Sbjct: 191 ------------------------------------KAISDQDFDATKAAYVAAQASHAS 214

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               ++     +               K    +L   +       + ++  E      T+
Sbjct: 215 TQAARQAGEAGV---------------KTAEANLAVARAGQHHAQAAVSDAELQLSYTTV 259

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P AGT+   ++       Q  Q L+ +V         A     Q+  +K G    ++ 
Sbjct: 260 RAPAAGTV-GKRTLQVGQQIQPGQALLAVVSPDHWLV--ANFKENQLATMKAGQPVEIKI 316

Query: 353 PH-----YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT---DLAFSDNNIE 404
                  +    E        K   +         T+    V +KIT   +     N+  
Sbjct: 317 DAIKGQRFEGRVESFAPGTGAKFSLLPPDNATGNFTKIVQRVPVKITFDHNANTEANHDR 376

Query: 405 LRNGFPAEVLFTAK 418
           +  G  A      K
Sbjct: 377 ITPGLSAIATVKVK 390


>gi|83591186|ref|YP_431195.1| secretion protein HlyD [Moorella thermoacetica ATCC 39073]
 gi|83574100|gb|ABC20652.1| Secretion protein HlyD [Moorella thermoacetica ATCC 39073]
          Length = 405

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 74/256 (28%), Gaps = 40/256 (15%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L    T            E +           + +L   + LF+  A SQ  L+      
Sbjct: 111 LDQARTAPAQAEAGIKQAEARLKQAEVQAQLDEANLQRTQALFDSGAASQQQLDAARTAA 170

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             S   L       +                           L  +Q   A   + +   
Sbjct: 171 AASKENLEILRGALEAA----------------------RASLASSQAQIATAEAAVRQA 208

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +   +   I +P+ G +V  +       AQ +  ++ +V       +   VT + I +++
Sbjct: 209 QVALDNCYIKAPVDG-VVAARLLEPGETAQGA--VVTLVTTGD-LQVEINVTEEDINYLQ 264

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G   +V  P   +   K  +  +    P   +          Y V + I D        
Sbjct: 265 VGKKVSVEVPAAGN---KALEGSVASSSPAADKSTRL------YSVKVAIPDA-----PA 310

Query: 404 ELRNGFPAEVLFTAKN 419
           E++ G  A V+F  + 
Sbjct: 311 EVKPGMAATVVFQTRE 326



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 56/175 (32%), Gaps = 10/175 (5%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I      +G +      V + +   G +K   V  G ++ +G  +   ED +    + 
Sbjct: 47  GNIAQPARVTGTVQA-GTTVNVTAATPGKLKSVLVHVGDRVSRGQIIAELEDDDAAARLA 105

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  +   R      ++ +     +          ++ ++   L + +   ++      
Sbjct: 106 QAQAGLDQARTAPAQAEAGIKQAEARL---------KQAEVQAQLDEANLQRTQALFDSG 156

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           ++  + L    T   +   N   L       RA L+S Q  +   +    +  V+
Sbjct: 157 AASQQQLDAARTAAAASKENLEILRGALEAARASLASSQAQIATAEAAVRQAQVA 211


>gi|77459865|ref|YP_349372.1| secretion protein HlyD [Pseudomonas fluorescens Pf0-1]
 gi|77383868|gb|ABA75381.1| putative multidrug resistance protein A [Pseudomonas fluorescens
           Pf0-1]
          Length = 400

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 81/219 (36%), Gaps = 22/219 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
             G+ S   +L   + ++R +Y N   ++ + +  +A +   Q +    KNL    A+SQ
Sbjct: 100 EVGLQSAKANLARTVRQVRGLYSNVDGMKAQVNAQQAEVQKAQDNFNRRKNLAAGGAISQ 159

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +   L       K  L+  + L D+  +     +   +  L Q   T 
Sbjct: 160 EELSHARDDLTSAQNAL----ANAKQQLKTTSALVDDTVVSSHPDVMAAAAQLRQAYLTN 215

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A              + T+++P+ G +   ++       Q    LM ++P     +I A 
Sbjct: 216 A--------------RSTLIAPVTGYVAK-RTVQLGQRVQPGTALMAVIPLD-QLWIDAN 259

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               Q++ ++ G    +    Y      KF   ++ +  
Sbjct: 260 FKETQLRDMRIGQPVEIESDIYGSDV--KFNGTVDSLGA 296



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 52/142 (36%), Gaps = 9/142 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVVEI    +G +     ++G  + +G  L+ F+  +        +V +++ + ++ 
Sbjct: 59  VNGNVVEITPLVTGTVVSIGADDGDLVHEGQVLINFDPNDA-------EVGLQSAKANLA 111

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                +  L +  D ++    +++ ++      ++    K    G +     L      +
Sbjct: 112 RTVRQVRGLYSNVDGMKAQVNAQQAEVQKAQDNFN--RRKNLAAGGAISQEELSHARDDL 169

Query: 172 RSIYLNRLDLENKSSLLRALLS 193
            S      + + +     AL+ 
Sbjct: 170 TSAQNALANAKQQLKTTSALVD 191


>gi|74313255|ref|YP_311674.1| multidrug resistance secretion protein [Shigella sonnei Ss046]
 gi|82545234|ref|YP_409181.1| multidrug resistance secretion protein [Shigella boydii Sb227]
 gi|110642810|ref|YP_670540.1| multidrug resistance protein A [Escherichia coli 536]
 gi|157157777|ref|YP_001463997.1| multidrug resistance protein A [Escherichia coli E24377A]
 gi|157162136|ref|YP_001459454.1| multidrug resistance protein A [Escherichia coli HS]
 gi|170019064|ref|YP_001724018.1| efflux pump membrane protein [Escherichia coli ATCC 8739]
 gi|170682707|ref|YP_001744836.1| multidrug resistance protein A [Escherichia coli SMS-3-5]
 gi|209920129|ref|YP_002294213.1| multidrug resistance protein [Escherichia coli SE11]
 gi|215488005|ref|YP_002330436.1| multidrug efflux system [Escherichia coli O127:H6 str. E2348/69]
 gi|218555232|ref|YP_002388145.1| multidrug efflux system [Escherichia coli IAI1]
 gi|218559676|ref|YP_002392589.1| multidrug efflux system [Escherichia coli S88]
 gi|218690812|ref|YP_002399024.1| multidrug efflux system [Escherichia coli ED1a]
 gi|218696281|ref|YP_002403948.1| multidrug efflux system [Escherichia coli 55989]
 gi|218701180|ref|YP_002408809.1| multidrug efflux system [Escherichia coli IAI39]
 gi|218706184|ref|YP_002413703.1| multidrug efflux system [Escherichia coli UMN026]
 gi|227888220|ref|ZP_04006025.1| MFP family membrane fusion protein [Escherichia coli 83972]
 gi|253772455|ref|YP_003035286.1| efflux pump membrane protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254162621|ref|YP_003045729.1| multidrug efflux system [Escherichia coli B str. REL606]
 gi|256019534|ref|ZP_05433399.1| multidrug efflux system [Shigella sp. D9]
 gi|260845332|ref|YP_003223110.1| multidrug efflux system protein EmrA [Escherichia coli O103:H2 str.
           12009]
 gi|260869363|ref|YP_003235765.1| multidrug efflux system protein EmrA [Escherichia coli O111:H- str.
           11128]
 gi|297518175|ref|ZP_06936561.1| multidrug efflux system protein EmrA [Escherichia coli OP50]
 gi|300815912|ref|ZP_07096136.1| efflux pump membrane protein [Escherichia coli MS 107-1]
 gi|300896000|ref|ZP_07114563.1| efflux pump membrane protein [Escherichia coli MS 198-1]
 gi|300906817|ref|ZP_07124498.1| efflux pump membrane protein [Escherichia coli MS 84-1]
 gi|300916834|ref|ZP_07133538.1| efflux pump membrane protein [Escherichia coli MS 115-1]
 gi|300922741|ref|ZP_07138830.1| efflux pump membrane protein [Escherichia coli MS 182-1]
 gi|300930538|ref|ZP_07145934.1| efflux pump membrane protein [Escherichia coli MS 187-1]
 gi|300941054|ref|ZP_07155573.1| efflux pump membrane protein [Escherichia coli MS 21-1]
 gi|300990591|ref|ZP_07179241.1| efflux pump membrane protein [Escherichia coli MS 200-1]
 gi|301019041|ref|ZP_07183254.1| efflux pump membrane protein [Escherichia coli MS 69-1]
 gi|301050528|ref|ZP_07197404.1| efflux pump membrane protein [Escherichia coli MS 185-1]
 gi|301305431|ref|ZP_07211525.1| efflux pump membrane protein [Escherichia coli MS 124-1]
 gi|301327375|ref|ZP_07220624.1| efflux pump membrane protein [Escherichia coli MS 78-1]
 gi|306812435|ref|ZP_07446633.1| multidrug efflux system protein EmrA [Escherichia coli NC101]
 gi|307314427|ref|ZP_07594032.1| efflux pump membrane protein [Escherichia coli W]
 gi|312965600|ref|ZP_07779830.1| multidrug resistance protein A [Escherichia coli 2362-75]
 gi|331658795|ref|ZP_08359737.1| multidrug resistance protein A [Escherichia coli TA206]
 gi|73856732|gb|AAZ89439.1| multidrug resistance secretion protein [Shigella sonnei Ss046]
 gi|81246645|gb|ABB67353.1| multidrug resistance secretion protein [Shigella boydii Sb227]
 gi|110344402|gb|ABG70639.1| multidrug resistance protein A [Escherichia coli 536]
 gi|157067816|gb|ABV07071.1| multidrug resistance protein A [Escherichia coli HS]
 gi|157079807|gb|ABV19515.1| multidrug resistance protein A [Escherichia coli E24377A]
 gi|169753992|gb|ACA76691.1| efflux pump membrane protein [Escherichia coli ATCC 8739]
 gi|170520425|gb|ACB18603.1| multidrug resistance protein A [Escherichia coli SMS-3-5]
 gi|209913388|dbj|BAG78462.1| multidrug resistance protein [Escherichia coli SE11]
 gi|215266077|emb|CAS10497.1| multidrug efflux system [Escherichia coli O127:H6 str. E2348/69]
 gi|218353013|emb|CAU98834.1| multidrug efflux system [Escherichia coli 55989]
 gi|218362000|emb|CAQ99606.1| multidrug efflux system [Escherichia coli IAI1]
 gi|218366445|emb|CAR04197.1| multidrug efflux system [Escherichia coli S88]
 gi|218371166|emb|CAR18997.1| multidrug efflux system [Escherichia coli IAI39]
 gi|218428376|emb|CAR09305.2| multidrug efflux system [Escherichia coli ED1a]
 gi|218433281|emb|CAR14181.1| multidrug efflux system [Escherichia coli UMN026]
 gi|222034384|emb|CAP77125.1| Multidrug resistance protein A [Escherichia coli LF82]
 gi|227834860|gb|EEJ45326.1| MFP family membrane fusion protein [Escherichia coli 83972]
 gi|242378247|emb|CAQ33022.1| EmrA Membrane Fusion Protein, subunit of EmrAB-TolC multidrug
           efflux transport system [Escherichia coli BL21(DE3)]
 gi|253323499|gb|ACT28101.1| efflux pump membrane protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974522|gb|ACT40193.1| multidrug efflux system [Escherichia coli B str. REL606]
 gi|253978689|gb|ACT44359.1| multidrug efflux system [Escherichia coli BL21(DE3)]
 gi|257760479|dbj|BAI31976.1| multidrug efflux system protein EmrA [Escherichia coli O103:H2 str.
           12009]
 gi|257765719|dbj|BAI37214.1| multidrug efflux system protein EmrA [Escherichia coli O111:H- str.
           11128]
 gi|281179691|dbj|BAI56021.1| multidrug resistance protein [Escherichia coli SE15]
 gi|284922626|emb|CBG35714.1| multidrug resistance protein A [Escherichia coli 042]
 gi|294489707|gb|ADE88463.1| multidrug resistance protein A [Escherichia coli IHE3034]
 gi|300297784|gb|EFJ54169.1| efflux pump membrane protein [Escherichia coli MS 185-1]
 gi|300305708|gb|EFJ60228.1| efflux pump membrane protein [Escherichia coli MS 200-1]
 gi|300360101|gb|EFJ75971.1| efflux pump membrane protein [Escherichia coli MS 198-1]
 gi|300399420|gb|EFJ82958.1| efflux pump membrane protein [Escherichia coli MS 69-1]
 gi|300401418|gb|EFJ84956.1| efflux pump membrane protein [Escherichia coli MS 84-1]
 gi|300415900|gb|EFJ99210.1| efflux pump membrane protein [Escherichia coli MS 115-1]
 gi|300420926|gb|EFK04237.1| efflux pump membrane protein [Escherichia coli MS 182-1]
 gi|300454218|gb|EFK17711.1| efflux pump membrane protein [Escherichia coli MS 21-1]
 gi|300461594|gb|EFK25087.1| efflux pump membrane protein [Escherichia coli MS 187-1]
 gi|300531841|gb|EFK52903.1| efflux pump membrane protein [Escherichia coli MS 107-1]
 gi|300839351|gb|EFK67111.1| efflux pump membrane protein [Escherichia coli MS 124-1]
 gi|300846029|gb|EFK73789.1| efflux pump membrane protein [Escherichia coli MS 78-1]
 gi|305854473|gb|EFM54911.1| multidrug efflux system protein EmrA [Escherichia coli NC101]
 gi|306905995|gb|EFN36516.1| efflux pump membrane protein [Escherichia coli W]
 gi|307554661|gb|ADN47436.1| multidrug resistance protein A [Escherichia coli ABU 83972]
 gi|307625744|gb|ADN70048.1| multidrug efflux system protein EmrA [Escherichia coli UM146]
 gi|309703049|emb|CBJ02381.1| multidrug resistance protein A [Escherichia coli ETEC H10407]
 gi|312289749|gb|EFR17639.1| multidrug resistance protein A [Escherichia coli 2362-75]
 gi|312947219|gb|ADR28046.1| multidrug efflux system protein EmrA [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|315061964|gb|ADT76291.1| multidrug efflux system [Escherichia coli W]
 gi|315254461|gb|EFU34429.1| efflux pump membrane protein [Escherichia coli MS 85-1]
 gi|315284924|gb|EFU44369.1| efflux pump membrane protein [Escherichia coli MS 110-3]
 gi|315290995|gb|EFU50360.1| efflux pump membrane protein [Escherichia coli MS 153-1]
 gi|315298691|gb|EFU57945.1| efflux pump membrane protein [Escherichia coli MS 16-3]
 gi|320186476|gb|EFW61204.1| Multidrug resistance protein A [Shigella flexneri CDC 796-83]
 gi|320198438|gb|EFW73040.1| Multidrug resistance protein A [Escherichia coli EC4100B]
 gi|323183212|gb|EFZ68609.1| multidrug resistance protein A [Escherichia coli 1357]
 gi|323377454|gb|ADX49722.1| efflux pump membrane protein [Escherichia coli KO11]
 gi|323946344|gb|EGB42373.1| efflux pump membrane protein [Escherichia coli H120]
 gi|323951094|gb|EGB46970.1| efflux pump membrane protein [Escherichia coli H252]
 gi|323957102|gb|EGB52827.1| efflux pump membrane protein [Escherichia coli H263]
 gi|323966936|gb|EGB62364.1| efflux pump membrane protein [Escherichia coli M863]
 gi|323978704|gb|EGB73786.1| efflux pump membrane protein [Escherichia coli TW10509]
 gi|324005783|gb|EGB75002.1| efflux pump membrane protein [Escherichia coli MS 57-2]
 gi|324014416|gb|EGB83635.1| efflux pump membrane protein [Escherichia coli MS 60-1]
 gi|324020315|gb|EGB89534.1| efflux pump membrane protein [Escherichia coli MS 117-3]
 gi|324111318|gb|EGC05300.1| efflux pump membrane protein [Escherichia fergusonii B253]
 gi|324120044|gb|EGC13921.1| efflux pump membrane protein [Escherichia coli E1167]
 gi|331053377|gb|EGI25406.1| multidrug resistance protein A [Escherichia coli TA206]
 gi|332092123|gb|EGI97201.1| multidrug resistance protein A [Shigella boydii 3594-74]
          Length = 390

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 32  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 85  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 144

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 145 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 204

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 205 EVRNAWLALERT 216


>gi|325276721|ref|ZP_08142440.1| secretion protein HlyD family protein [Pseudomonas sp. TJI-51]
 gi|324098145|gb|EGB96272.1| secretion protein HlyD family protein [Pseudomonas sp. TJI-51]
          Length = 353

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 69/213 (32%), Gaps = 17/213 (7%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + L +Q     ++  + R  + + +  L +       A  +       ++  +       
Sbjct: 138 SRLAEQGAGTVQNAQQARSRVDQARARLANSQAALVAARKQVDI----LTAQVASADGQL 193

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               + L   +       I +P+ G +   ++     Y      L+ +VP  +   +   
Sbjct: 194 KRAEAGLEKAQLDLSYTRITAPVDGMV-GERALRVGAYVNPGARLLSVVPLQQAYVV-GN 251

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEV 389
               Q+ HV+ G   ++    ++    +K +  +E I P      +    +  T  + +V
Sbjct: 252 FQETQLTHVQPGQPVSISVDTFS---GEKLQGHVESIAPATGVTFAAVKPDNATGNFTKV 308

Query: 390 ILKITDLAFSDNNIELRN----GFPAEVLFTAK 418
           + +I      D+   L      G   E     +
Sbjct: 309 VQRIPVKIVFDDGQPLLARLRVGMSVEATIDTR 341



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 57/166 (34%), Gaps = 12/166 (7%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK+  VE+  Q+  G  L T +  +    +D  +  +   +      ++ L+      
Sbjct: 54  GFIKEVLVEDNQQVTAGQLLATIDARDYQAALDAAQAQLLVAKAQSADARATLE------ 107

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               +A    + +      +  +  +       S +       +   +           +
Sbjct: 108 ---RQAALIAQAEAAVKAAQAEAAFADHEVNRYSRLAEQGAGTVQNAQQARSRVDQARAR 164

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            +  +A L + +K + +   L  + A +   L + E  + K+ L+L
Sbjct: 165 LANSQAALVAARKQVDI---LTAQVASADGQLKRAEAGLEKAQLDL 207


>gi|292487764|ref|YP_003530637.1| HlyD family secretion protein [Erwinia amylovora CFBP1430]
 gi|291553184|emb|CBA20229.1| HlyD family secretion protein [Erwinia amylovora CFBP1430]
 gi|312171880|emb|CBX80137.1| HlyD family secretion protein [Erwinia amylovora ATCC BAA-2158]
          Length = 380

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/405 (12%), Positives = 117/405 (28%), Gaps = 83/405 (20%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +    ++ I+  + L+ W +   IE +  +      E N V I    +G I + +V++  
Sbjct: 44  IILGIVVVIMLFVALLFWLMTRNIETTDDA----FTEANAVTIAPKVAGYITQLKVKDNQ 99

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL-EKAFESRE 135
           ++ +G  L+  +  + T   D  +  +      +   ++ LD    +Y    ++A     
Sbjct: 100 RVKEGDLLVVIDARDATAQHDRAEAQLGVAVAQLHQAQAQLDLARVQYPAQKQQALAQLA 159

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
               ++L        +      ++  R++     R+R+      D + + +         
Sbjct: 160 RAEANYLNAREDDKRQRGVDPRATSQRNIDAASARLRTAKAELSDAQAQVA--------- 210

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                                     +  +  L++R+     +     +++   +     
Sbjct: 211 --------------------------VASQVALQIRQQETRVEACQSQVDQAQAQ----- 239

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                   L           + +P  G I            Q  
Sbjct: 240 ------------------------LNTASLNLSYTEVRAPYDGFISKRNV-QPGTLVQAG 274

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI----- 370
             L  +V      +I A     Q+  +K G    +    + D++    K  ++ I     
Sbjct: 275 SSLFSLVSPD--VWIVANFKESQLARMKPGNKVDISVDAWPDLK---LKGHVDSIQMGSG 329

Query: 371 ---DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                  S+       +    V +KI   +  D N  L  G   E
Sbjct: 330 SRFSAFPSENATGNYVKIVQRVPVKIVIDSGLDANHPLPIGLSVE 374


>gi|221197761|ref|ZP_03570807.1| multidrug resistance protein A [Burkholderia multivorans CGD2M]
 gi|221204681|ref|ZP_03577698.1| multidrug resistance protein A [Burkholderia multivorans CGD2]
 gi|221213158|ref|ZP_03586134.1| multidrug resistance protein A [Burkholderia multivorans CGD1]
 gi|221167371|gb|EED99841.1| multidrug resistance protein A [Burkholderia multivorans CGD1]
 gi|221175538|gb|EEE07968.1| multidrug resistance protein A [Burkholderia multivorans CGD2]
 gi|221181693|gb|EEE14094.1| multidrug resistance protein A [Burkholderia multivorans CGD2M]
          Length = 407

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 88/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      + +L ++ LS  + DL     + +  AVSQ
Sbjct: 97  QVALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRQSDLSKAEDDLRRRLAVAQTGAVSQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ +R      D A  + A+     +     +    
Sbjct: 157 EE------------------ISHARDAVRAAQASLDAAQQQLASNRALTANTTIASHPNV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 199 LAAAAKVRDAYLANARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWVDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 257 FKEVQLKHMRIGQPVELTADIYGSSVVYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++       + + +      +V   
Sbjct: 317 RLPVRIELDPKDLDKHPLRIGLSMQVDVNIK 347



 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 56  VNGNVVQITPQVTGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      E+ L   L   +  +   +  ++   +V  +      
Sbjct: 116 GLFVNDDQYRAQVALRQSDLSKAEDDLRRRLAVAQTGAVSQEEISHARDAVRAAQASLDA 175

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 176 AQQQLASNRALTAN 189


>gi|169833323|ref|YP_001693571.1| transport protein ComB [Streptococcus pneumoniae Hungary19A-6]
 gi|168995825|gb|ACA36437.1| transport protein ComB [Streptococcus pneumoniae Hungary19A-6]
          Length = 449

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 53/446 (11%), Positives = 151/446 (33%), Gaps = 49/446 (10%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+               + + L+K
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ-----------KKQLEYLQK 121

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           + +  E    +     +    + +   + S+  S   +   + S        + +   L 
Sbjct: 122 SLQEGENHFPEEDKFGYQATFRDYISQVGSLRASTSQQNETIASQNAAASQTQAEIGNLI 181

Query: 190 ALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELR-----ENIHEQKNMLRH 243
           +   +  +D   +K+  E  A ++  +L       YKS  E       + + + +  +  
Sbjct: 182 SQTEAKIRDYQTVKSAIETGASLAGQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQ 241

Query: 244 INELYDEANLEFA---------------------NYLKEISRDLEQNQRTFADEMSKLTI 282
           +        +++A                      +L ++ ++L    +   +  S   +
Sbjct: 242 LESSLATYRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKV 301

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQI 339
                ++  I +   G +  N   S S+   +   L ++ P         + A ++ K +
Sbjct: 302 QGNLLDKGKITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDV 361

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +K G +       +    +    + I  ID   ++ +       ++++  +I     S
Sbjct: 362 ARIKVGDSVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAEIN--LTS 414

Query: 400 DNNIELRNGFPAEVLFTAKNTTLAQE 425
           +   +LR G    +       +  + 
Sbjct: 415 EQAEKLRYGVEGRLQMITGKKSYLRY 440


>gi|260463274|ref|ZP_05811475.1| secretion protein HlyD family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259030864|gb|EEW32139.1| secretion protein HlyD family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 395

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 89/291 (30%), Gaps = 26/291 (8%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + QL+       +   + +   ++    ++ +    +  +         +     + ++ 
Sbjct: 105 DNQLVKQGDVLFAIDPEPYRIALAQADAAVAVARVGIEQLRAAYSQATAQQKSDASEVAF 164

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q       +L +K   +++ L+Q +  + K+  +L   + EQ  +        +     
Sbjct: 165 AQSQYDRAADLAQKGINAKSSLDQAKNDLDKARQQLA--VAEQGIISAKAALAGNPDIE- 221

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                            T    ++          Q T+ +P  G I    SF    Y   
Sbjct: 222 ------------TDKHPTVMAALAARDKAAYDLAQTTVRAPADGVISQASSFKVGQYVGS 269

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE-------KKFKAII 367
             PL  +V      +I A     Q+ H+K G  A +    Y                   
Sbjct: 270 GTPLFALVETGDT-WIDANFKETQLTHMKPGQKAEIVVDTYPGRTFEATVKAIGAGTGAE 328

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             + P  +   N ++  +   V L++TD    D  + LR G  A V     
Sbjct: 329 FSLLPAQNATGNWVKVTQRIPVRLELTDP---DAKMALRTGMSAAVTVDTG 376



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 57/176 (32%), Gaps = 6/176 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR    SL    L + + I G   W      + + +++     +   V I S  +G I K
Sbjct: 45  KRGIGRSLLMFALPAALAIGGGYVWVTGGRYQETENAN----LQQAKVSIASDTAGRIVK 100

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLNNKYDVL 127
             + +   + QG  L   +       +     ++   R  I+  ++A        K D  
Sbjct: 101 VAISDNQLVKQGDVLFAIDPEPYRIALAQADAAVAVARVGIEQLRAAYSQATAQQKSDAS 160

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           E AF   +      L +         +   + + ++ +      + I   +  L  
Sbjct: 161 EVAFAQSQYDRAADLAQKGINAKSSLDQAKNDLDKARQQLAVAEQGIISAKAALAG 216


>gi|152983106|ref|YP_001353461.1| cobalt-zinc-cadmium resistance protein CzcB [Janthinobacterium sp.
           Marseille]
 gi|151283183|gb|ABR91593.1| cobalt-zinc-cadmium resistance protein CzcB [Janthinobacterium sp.
           Marseille]
          Length = 526

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 97/297 (32%), Gaps = 25/297 (8%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           K  +S E       G+   +  ++   G+  +        T ++ I   RL+ +    ++
Sbjct: 172 KGDQSYEFSYAQEEGQVAMSDEQLTKNGVKILKAGPVRIKTELQLIGEIRLNEDRTVQVV 231

Query: 189 RALLSSHQKDLTMMKNLFEKN----AVSQNDLNQQ--ERIVYKSTLELRENIHEQKNMLR 242
             L    +       +   K      +S   L+ Q  E +  +  L L    +E++  L 
Sbjct: 232 PRLAGIVESVRANAGDRVRKGQILAVISSQALSDQRSELLAAQKRLALARTTYEREKTLW 291

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                 ++  L+    ++E     +  Q+  A   +  +       Q  I SPI G I  
Sbjct: 292 EEKISAEQDYLQARTTMQEAQIIAQSAQQKLAALGASPSST--NLTQYEIRSPIDGVITE 349

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  S+   A++   +  I       ++   V  + I  VK G  ATV+   +      +
Sbjct: 350 KRI-SAGTVAKEDANIFDIS-DLSTVWVDLTVRAQDINAVKTGQKATVKATAFDA----E 403

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               +  I  ++ +Q    +             +  ++     R G    V   +  
Sbjct: 404 GTGTVSYIGSLVGEQTRAAK-----------ARIVMANPKGTWRPGLAVNVALVSDE 449



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 37/97 (38%), Gaps = 5/97 (5%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCH 109
           +  V  +     GI++  +   G ++ +G  L        +D       + K L   R  
Sbjct: 225 DRTVQVVPRLA-GIVESVRANAGDRVRKGQILAVISSQALSDQRSELLAAQKRLALARTT 283

Query: 110 IDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGKY 145
            + EK+  +  ++ + D L+     +E Q++    + 
Sbjct: 284 YEREKTLWEEKISAEQDYLQARTTMQEAQIIAQSAQQ 320


>gi|308752605|gb|ADO46088.1| efflux transporter, RND family, MFP subunit [Hydrogenobacter
           thermophilus TK-6]
          Length = 369

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 66/164 (40%), Gaps = 3/164 (1%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           PI+  + +SG +    N V I+S  SG +K+ +V+ G ++ +G  L   +     + +  
Sbjct: 36  PIKKVIYASGYVKP-RNYVVIRSEVSGYVKEIRVKEGDKVRKGEILAVMDAGPVEESLRE 94

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYG 156
            +  ++  +  +  +      L  + ++ ++  E  +  L   + L +      + +   
Sbjct: 95  AQERLRLSQERLREDSDYRRSLEKQVEITKRNMEQAQRYLFRRESLAQRGLIPREQYEEA 154

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             S   +       + +   +   LE++   L A +   +K+L 
Sbjct: 155 KRSYENAKSEYEKALTTYRDSIKALESEERFLSASVERIKKELD 198



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/273 (11%), Positives = 84/273 (30%), Gaps = 45/273 (16%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L++   R+R     R  LE +  + +  +   Q+ L   ++L ++  + +
Sbjct: 89  EESLREAQERLRLSQERLREDSDYRRSLEKQVEITKRNMEQAQRYLFRRESLAQRGLIPR 148

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
               + +R    +  E  + +   ++ +                      + LE  +R  
Sbjct: 149 EQYEEAKRSYENAKSEYEKALTTYRDSI----------------------KALESEERFL 186

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYI 330
           +  + ++    K  ++  I SPI G ++ N+      Y         L  +        +
Sbjct: 187 SASVERIK---KELDKYYIKSPINGVVL-NKYVEVGEYINHISQDNKLFSVGESDAKEIV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V  +    +K G    +    Y       F+  +  I+  I++    L+     + +
Sbjct: 243 -LNVDEEYASSIKSGMKVYISLDVYPGR---VFEGRLVLIEGEINKNKKTLEV----KAV 294

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
             +     ++           E     ++    
Sbjct: 295 ADLPPEVPANA--------TVEANILVEDRKAL 319


>gi|319786595|ref|YP_004146070.1| hemolysin D [Pseudoxanthomonas suwonensis 11-1]
 gi|317465107|gb|ADV26839.1| secretion protein HlyD family protein [Pseudoxanthomonas suwonensis
           11-1]
          Length = 393

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 82/270 (30%), Gaps = 28/270 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + ++R  + +    + +    +  +   + D+   + L    A+S+
Sbjct: 96  QVAYDQAVANLATTVRQVRGYFSSADAAQAELRARQVAVEQARADVKRRQGLVASGAISR 155

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L   + ++  +   L       +     ++                      Q Q   
Sbjct: 156 EELAHAQDVLAAAEAALGSAQGNLQRSRALVDATT------------------VQEQPQV 197

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               S+L       ++  I++P++G +   Q        Q    LM +VP  +  ++ A 
Sbjct: 198 QAAASQLRQAWLELQRTAIVAPVSGYVARRQV-QLGERVQPGATLMTVVPL-EQMWVEAN 255

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPIISQQDNNLQTQE 385
               Q+  ++ G    V    Y                      + P  +   N ++  +
Sbjct: 256 FKETQLARMRIGQPVEVEADLYGGSVRYQGKVAALGLGTGSAFSLLPAQNASGNWIKIVQ 315

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              V +++     +++ + L      +V  
Sbjct: 316 RVPVRIELDAQQLAEHPLRLGLSMHVDVDV 345



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 60/187 (32%), Gaps = 10/187 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + NVV +     G +   +V++G ++  G  L+  +  +     D    ++      + 
Sbjct: 55  AQGNVVSVVPQTMGTVVGIEVDDGDRVEAGDVLVRLDPNDAQVAYDQAVANLATTVRQVR 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
              S+ D    +    + A E     +    G   S     +   +    +  +     +
Sbjct: 115 GYFSSADAAQAELRARQVAVEQARADVKRRQGLVASGAISREELAHAQDVLAAAEAALGS 174

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLFE-------KNAVSQNDLNQQER 221
              ++  +R  ++  +   +  + +    L      L            V++  +   ER
Sbjct: 175 AQGNLQRSRALVDATTVQEQPQVQAAASQLRQAWLELQRTAIVAPVSGYVARRQVQLGER 234

Query: 222 IVYKSTL 228
           +   +TL
Sbjct: 235 VQPGATL 241


>gi|260856795|ref|YP_003230686.1| multidrug efflux system protein EmrA [Escherichia coli O26:H11 str.
           11368]
 gi|257755444|dbj|BAI26946.1| multidrug efflux system protein EmrA [Escherichia coli O26:H11 str.
           11368]
          Length = 390

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 65/192 (33%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 32  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+  +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 85  EGDVLVILDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 144

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 145 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 204

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 205 EVRNAWLALERT 216


>gi|187776015|ref|ZP_02992798.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4196]
 gi|188025082|ref|ZP_02997349.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4113]
 gi|189009919|ref|ZP_03006139.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4076]
 gi|189402168|ref|ZP_03006612.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4401]
 gi|189405978|ref|ZP_03008013.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC508]
 gi|208808607|ref|ZP_03250944.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812158|ref|ZP_03253487.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4045]
 gi|208820096|ref|ZP_03260416.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396692|ref|YP_002272152.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4115]
 gi|217327901|ref|ZP_03443984.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           TW14588]
 gi|187769609|gb|EDU33453.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4196]
 gi|188014966|gb|EDU53088.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4113]
 gi|189003155|gb|EDU72141.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4076]
 gi|189357379|gb|EDU75798.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4401]
 gi|189377188|gb|EDU95604.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC508]
 gi|208728408|gb|EDZ78009.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733435|gb|EDZ82122.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4045]
 gi|208740219|gb|EDZ87901.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158092|gb|ACI35525.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4115]
 gi|217320268|gb|EEC28693.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           TW14588]
          Length = 394

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 79/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +     +N   L+    + +  L+  Q D      L   N + +
Sbjct: 102 RQAFEKAKTALASSVRQTHQQMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 161

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 162 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 215

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 216 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 261

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 262 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 319

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 320 VQRLPVRIELDQKQLEQYPLRI 341


>gi|89068357|ref|ZP_01155760.1| GAF domain protein [Oceanicola granulosus HTCC2516]
 gi|89046011|gb|EAR52070.1| GAF domain protein [Oceanicola granulosus HTCC2516]
          Length = 639

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 70/201 (34%), Gaps = 16/201 (7%)

Query: 202 MKNLFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           ++ L +++ V   +     E       +   E I    +    + +L  E          
Sbjct: 403 IEGLVQRSVVAPFSGYLATESARAGDEVAAGEIIATINDQDLQLEKLRLETARRQREAEY 462

Query: 261 E---ISRDLEQN---QRTFADEMSKLTILEKTREQKTILSPIAGTIV-YNQSFSSSNYAQ 313
           +    +R+L      +R      S+L ++E+   +  I +P  G +V  + S    +   
Sbjct: 463 DEALATRELATATILRRQIEQVDSQLALIEEQLARTRIRAPFDGFVVEGDLSQRVGSSLD 522

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           + Q L KI P      +  +V  + I  V+ G    +R         +     + ++ PI
Sbjct: 523 RGQELFKIAPLDAYRVV-LEVDERDIAQVEPGQEGALRLSA---RPGETLDYAVTRLTPI 578

Query: 374 ISQQDNNLQTQEYYEVILKIT 394
              +D     + ++ V   + 
Sbjct: 579 AEARD----GRNFFRVEAALD 595


>gi|229815486|ref|ZP_04445817.1| hypothetical protein COLINT_02533 [Collinsella intestinalis DSM
           13280]
 gi|229808923|gb|EEP44694.1| hypothetical protein COLINT_02533 [Collinsella intestinalis DSM
           13280]
          Length = 278

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 16/167 (9%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-------SSSNYAQQ 314
             + +   Q       +           +T+ +P AG+IV   +        S       
Sbjct: 19  AQQAVNAAQVAVESAQASYNDAAAKAALRTVKAPAAGSIVAMNAQVGADLGESLGGAGTN 78

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD-IREKKFKAIIEKIDPI 373
             PLM+I        +  +V  + I  V    TAT+  P + D     +   I       
Sbjct: 79  G-PLMQIA-DLSKMKVTIQVEEEDIASVAVDQTATISCPAFPDLSMTGRVTGIASIASGD 136

Query: 374 ISQQD-NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +Q   + +     + V + I           L+ G  AEV  T + 
Sbjct: 137 GAQMSYDGMGGSPTFAVDIMIDAPDP-----RLKPGMTAEVSLTTQK 178


>gi|292898993|ref|YP_003538362.1| efflux pump HlyD family protein [Erwinia amylovora ATCC 49946]
 gi|291198841|emb|CBJ45951.1| putative efflux pump HlyD-family protein [Erwinia amylovora ATCC
           49946]
          Length = 377

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/405 (12%), Positives = 117/405 (28%), Gaps = 83/405 (20%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +    ++ I+  + L+ W +   IE +  +      E N V I    +G I + +V++  
Sbjct: 41  IILGIVVVIMLFVALLFWLMTRNIETTDDA----FTEANAVTIAPKVAGYITQLKVKDNQ 96

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL-EKAFESRE 135
           ++ +G  L+  +  + T   D  +  +      +   ++ LD    +Y    ++A     
Sbjct: 97  RVKEGDLLVVIDARDATAQHDRAEAQLGVAVAQLHQAQAQLDLARVQYPAQKQQALAQLA 156

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
               ++L        +      ++  R++     R+R+      D + + +         
Sbjct: 157 RAEANYLNAREDDKRQRGVDPRATSQRNIDAASARLRTAKAELSDAQAQVA--------- 207

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                                     +  +  L++R+     +     +++   +     
Sbjct: 208 --------------------------VASQVALQIRQQETRVEACQSQVDQAQAQ----- 236

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                   L           + +P  G I            Q  
Sbjct: 237 ------------------------LNTASLNLSYTEVRAPYDGFISKRNV-QPGTLVQAG 271

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI----- 370
             L  +V      +I A     Q+  +K G    +    + D++    K  ++ I     
Sbjct: 272 SSLFSLVSPD--VWIVANFKESQLARMKPGNKVDISVDAWPDLK---LKGHVDSIQMGSG 326

Query: 371 ---DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                  S+       +    V +KI   +  D N  L  G   E
Sbjct: 327 SRFSAFPSENATGNYVKIVQRVPVKIVIDSGLDANHPLPIGLSVE 371


>gi|153806684|ref|ZP_01959352.1| hypothetical protein BACCAC_00954 [Bacteroides caccae ATCC 43185]
 gi|149131361|gb|EDM22567.1| hypothetical protein BACCAC_00954 [Bacteroides caccae ATCC 43185]
          Length = 299

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 93/280 (33%), Gaps = 33/280 (11%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++      +   L    GK   T  ++       +Y         M+S+   R DL  + 
Sbjct: 39  IVSAEAAGKLLNLDIEEGKRLQTGEEIGLVDTLQLYLKKLQLEANMKSVESQRPDLAKQI 98

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  +  +++ +++   ++NL    A +Q  L+  +  V     +L        N    + 
Sbjct: 99  AATKQQIATAEREKKRVENLLTAGAANQKQLDDWDAQVKLLERQLAAQESSLLNSTNSLT 158

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E  +   ++ A                                +  I SPI GT++  + 
Sbjct: 159 EQGNSVAIQVAQVK-------------------------DQLNKCHIQSPIEGTVLA-KY 192

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
             +   A   +PL K V      Y+RA +T +Q+  VK G   TV +  Y +  +K +  
Sbjct: 193 AEAGELAAVGKPLFK-VAEIGRMYLRAYITSEQLSQVKLGDKVTV-YSDYGNSEQKAYTG 250

Query: 366 IIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSD 400
           +I  I              N +    Y V + +       
Sbjct: 251 VITWISERSEFTPKTILTKNERANLVYAVKIAVESDGALK 290


>gi|78213482|ref|YP_382261.1| secretion protein HlyD [Synechococcus sp. CC9605]
 gi|78197941|gb|ABB35706.1| Secretion protein HlyD [Synechococcus sp. CC9605]
          Length = 388

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 98/254 (38%), Gaps = 24/254 (9%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               ++++  +   L A L   + D+     +     +++ DL+ + +       +   N
Sbjct: 82  QAQQKVNVSPRKQGLLAELKVDEGDVVENGQVLA--LMNRGDLDDRLQEKRALLRQAEAN 139

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              ++      ++LY    L   ++  +   ++   Q        ++  LE+   +KTI 
Sbjct: 140 YQNKREDFERRSQLYASGALSADDF-SDARFEMLAGQAGLVAARERVEQLEQESREKTIR 198

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMK--------IVPHSKLTYIRAKVTPKQIQHVKKG 345
           +P +GTI   +     ++   +             IV  S+   +RA+V    I  +  G
Sbjct: 199 APFSGTITA-RYAEPGSFVTPTTAASATAGATSSSIVELSQALEVRARVPESDIGRIATG 257

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
             A +R   Y D R   F+A + +I P  +++++       +EV L      F +   +L
Sbjct: 258 QKAEIRVDAYPDER---FQARVNEIAPRAAKENSVTS----FEVKLN-----FVNPQNKL 305

Query: 406 RNGFPAEVLFTAKN 419
           + G  A++ F    
Sbjct: 306 KIGMTADINFLTGR 319



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/239 (12%), Positives = 84/239 (35%), Gaps = 9/239 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   +++SGE+  +  V  +     G++ + +V+ G  +  G  L      +  D +  K
Sbjct: 71  LSGVITASGELQAQQKV-NVSPRKQGLLAELKVDEGDVVENGQVLALMNRGDLDDRLQEK 129

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  ++    +   ++   +  +  Y    +    F     ++L       +   +V    
Sbjct: 130 RALLRQAEANYQNKREDFERRSQLYASGALSADDFSDARFEMLAGQAGLVAARERVEQLE 189

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             S  ++++   +   +         +   ++      ++    + + + L  +  V ++
Sbjct: 190 QESREKTIRAPFSGTITARYAEPGSFVTPTTAASATAGATSSSIVELSQALEVRARVPES 249

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           D+    RI      E+R + +  +     +NE+   A  E +    E+  +    Q   
Sbjct: 250 DI---GRIATGQKAEIRVDAYPDERFQARVNEIAPRAAKENSVTSFEVKLNFVNPQNKL 305


>gi|261880471|ref|ZP_06006898.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270332810|gb|EFA43596.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 297

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 94/242 (38%), Gaps = 39/242 (16%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           SI   + +++ + ++LR  L   +++    + L    A ++  L+  +  V     +L  
Sbjct: 84  SIAYQKPNVDKQIAVLRQQLKQAEQEERRFQGLVNDGAANRKQLDDAQSAVRVLKRQLAA 143

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                 N  R +N      +++    L                            ++  I
Sbjct: 144 QQSALGNNTRALNSQISANDIQKYQVL-------------------------DQLKKCHI 178

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SPI GT++  +      +A   +PL K V ++K  ++RA VT +Q+  +K G   +V F
Sbjct: 179 MSPITGTVLE-KYAEKGEFAAMGKPLFK-VANTKNLFLRAYVTSQQLTKIKVGQQVSV-F 235

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             Y     K+++  +  I P           ++ +  + Y V + +     +D NI++  
Sbjct: 236 SDYGAGERKEYRGTVTWISPRSEFTPKTILTDDERADQVYAVKVAVQ----NDGNIKI-- 289

Query: 408 GF 409
           G 
Sbjct: 290 GM 291


>gi|255067676|ref|ZP_05319531.1| HlyD family secretion protein [Neisseria sicca ATCC 29256]
 gi|255048017|gb|EET43481.1| HlyD family secretion protein [Neisseria sicca ATCC 29256]
          Length = 200

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 67/204 (32%), Gaps = 22/204 (10%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRD--------LEQNQRTFADEMSKLTI 282
            + + +             EA L+ A     +++          E  Q   A+  + L +
Sbjct: 3   ADAVSQSSRDAAQTAVKQAEAGLKQAQEQYAVAQQNIINTGVGREGAQAGIANAQALLDL 62

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            ++      I +P +G  +   S            LM +VP  +     A +    + +V
Sbjct: 63  AKQDLGHTVIYAPASGK-LGEVSVKQGQLVSAGTQLMSVVPPERWII--ANIKETDMANV 119

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYY----EVILKIT 394
           K G +A+V          K F   + +I P  + +      +  T  +      + +KI 
Sbjct: 120 KIGQSASVSIDALG---GKAFSGKVAEISPATASEFSLIKADSGTGNFVKIAQRIAVKIV 176

Query: 395 DLAFSDNNIELRNGFPAEVLFTAK 418
             A   +   L  G  AEV    K
Sbjct: 177 FDAGQQDLERLAPGMSAEVNIATK 200


>gi|239814747|ref|YP_002943657.1| secretion protein HlyD family protein [Variovorax paradoxus S110]
 gi|239801324|gb|ACS18391.1| secretion protein HlyD family protein [Variovorax paradoxus S110]
          Length = 336

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 91/296 (30%), Gaps = 15/296 (5%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           AF + E      + +     +      + +    L++   + R     +  L  K+    
Sbjct: 48  AFNANERVAELTVREGDHVRAGQVLGRLDTRSLVLRVAQAQARIGVQEQALLRLKTGSRP 107

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L+     +   +   +        L    +      +  ++    Q      + +L +
Sbjct: 108 EELAQAGAQVAAAQADADLAQQQLARLQAIGQTTAGRAVSQQDLDSAQARRKVALAQLDN 167

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
               +          D+ Q Q       + L ++     +  + SPI   +V  +     
Sbjct: 168 VRKAQQLAVAGPRKEDIAQAQAQLESARADLALMNHQLAEAELRSPIDA-VVRARLLEPG 226

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           + A   +P   +   +   +IRA V    +  V+ G  A+V          +     +  
Sbjct: 227 DMASPQRPAFTLA-ITDPKWIRAYVAEPDLGRVRPGQPASV---ATDSQPGQPIAGKVGY 282

Query: 370 IDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           I  +       +QT+E      YE+ + + D         LR G PA V     +T
Sbjct: 283 ISSVAEFTPKTVQTEELRSSLVYEIRVMVDDKED-----RLRLGMPATVRLQLSST 333


>gi|323701483|ref|ZP_08113156.1| secretion protein HlyD family protein [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533492|gb|EGB23358.1| secretion protein HlyD family protein [Desulfotomaculum nigrificans
           DSM 574]
          Length = 353

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 54/422 (12%), Positives = 119/422 (28%), Gaps = 85/422 (20%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEI 59
            +  +++     L     L ++       +     + L      ++++G +     +   
Sbjct: 3   AFAKIEQKKKLILGFFAGLIVLSAAIFGGYFYQKQTALAKERSELTATGTVEATSVLASF 62

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           K P  G I+   V+ GS + +G  L T E  E    +                       
Sbjct: 63  KVP--GRIENLLVDEGSLVHKGQLLATLETRELAAKL----------------------- 97

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                                      S         ++   ++         ++     
Sbjct: 98  ---------------------------SQAKGARQAAVAKARQAQSAVPMTSETVEATIQ 130

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             + K +   A   + ++       L +  AVS ND +       ++   LRE       
Sbjct: 131 QCQAKVAQAEAAARNAKQVYDRYVELHKAGAVSDNDFDSVTTKYEQAQAALREAQAALAQ 190

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                 ++                 + E  Q         +   +   +   + SP+ G 
Sbjct: 191 AEAARLKVQTS------------QAEYEAAQGQANQAEGAVQEAQSYLDNSQLKSPMEGY 238

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I   +   S        P+ +I      TY++  ++ ++I  VK G    +  P + +  
Sbjct: 239 ITQ-KFLESGEMLNAGTPVFEIT-DLAHTYVKVYISEQKIGRVKLGQKVQITVPAFPN-- 294

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEY------YEVILKITDLAFSDNNIELRNGFPAEV 413
            K F   +  I+            ++Y      +EV + +      + ++ L+ G  A V
Sbjct: 295 -KVFTGKVVWINNAGDFAVKKAVNEQYQHDLRSFEVKIDVP-----NPDLALKVGMTANV 348

Query: 414 LF 415
             
Sbjct: 349 KI 350


>gi|255527369|ref|ZP_05394245.1| secretion protein HlyD family protein [Clostridium carboxidivorans
           P7]
 gi|255508941|gb|EET85305.1| secretion protein HlyD family protein [Clostridium carboxidivorans
           P7]
          Length = 358

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/347 (12%), Positives = 108/347 (31%), Gaps = 89/347 (25%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V+ GS++ QG  ++  +                                      
Sbjct: 97  VTQISVDVGSKVNQGDVIIKLD-------------------------------------- 118

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                +  + Q+       ++  + + N    S    ++ +              +    
Sbjct: 119 ----AQDLQAQVDKAQATVNTARANLANASSGSRPEQIEQE--------------QAIVD 160

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                  + +K    ++ L    + +Q  L+  ++ +  +  + +    + + +      
Sbjct: 161 GAAQGYETAKKTYDRIQALVSSGSEAQQQLDLAKQQLASAEGQYKSAQAQLELLKNG--- 217

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                           S  ++  +    +  + L I + +    TI +PI+GT+      
Sbjct: 218 --------------PTSSSIDVFKAQVNEAEAGLKIAQTSLNNATITAPISGTVNAKNIN 263

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                A     L+ I  +S    + A    + +  +K+G    ++     D   K+F+  
Sbjct: 264 -VGETASPGTTLVSIS-NSGALCVNAYAPVEIVNGLKEGQDVMIKVSEIPD---KEFQGK 318

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           I  I+  +S +  N        +++K++     D N  L+ G  AEV
Sbjct: 319 ITVINSKLSSESRN--------ILVKVS---VVDPNSLLKPGMFAEV 354


>gi|227115522|ref|ZP_03829178.1| hypothetical protein PcarbP_21315 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 421

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 101/312 (32%), Gaps = 36/312 (11%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           + +    L   ++ + +    RE Q ++                +      +      ++
Sbjct: 65  QAAKQTTLAAPFEGIIREVLVREGQRVEQGQTLLILDPGQIEIQLRQAQAEVLKTQREVQ 124

Query: 173 SIYLNRLDLE-----NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           S+       E        S  R+  S+ Q +L   + LFE+  V++ +++  ++ ++   
Sbjct: 125 SLRQWEQSAEVSRARRAVSSARSTFSNTQANLRDTQALFERGIVARMEVDTLKQQIHAQE 184

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L     E + +L   N                   D +  +    +   +   L    
Sbjct: 185 QDLIAAQEELRTVLARGN-----------------GEDRKIAEMELTNAQVRYQTLATQV 227

Query: 288 EQKTILSPIAGTIVYNQ--------SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           E++T+ +P +G +V                    Q  PL  ++       +  +V    +
Sbjct: 228 ERQTVKAPFSGFVVRPATPDNSKPVVIHPGLLVSQGAPLFGVI-AQDRFQVATRVEETDL 286

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +++G    V    +A          +  ID      + +     YY+V++ + D   +
Sbjct: 287 HQLQEGMAVNVTGDGFAGQT---LTGKVASIDMQADAAEMSGSGA-YYDVVVSL-DTPLA 341

Query: 400 DNNIELRNGFPA 411
           D    +R G  A
Sbjct: 342 DLRQNIRLGMSA 353


>gi|255534142|ref|YP_003094514.1| secretion protein HlyD family protein [Pedobacter heparinus DSM
           2366]
 gi|255347126|gb|ACU06452.1| secretion protein HlyD family protein [Pedobacter heparinus DSM
           2366]
          Length = 347

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 88/293 (30%), Gaps = 29/293 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+    + +    +    G       + +  +++ +   N    +      +  L+  
Sbjct: 75  QVLVKLDDRDYKLKLEQALAGQKGASAGVGVSESQIAATAANTSTAKANIEAAKVKLNLA 134

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           QKD     NL +  +V+Q   +Q +     +         +    ++ +           
Sbjct: 135 QKDYERYANLVKDGSVTQQQFDQAKAQKESAQAAFTAANDQYNAAVKQVGTSQS------ 188

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                     L  +  T     + +           I +P  G +            Q  
Sbjct: 189 ---------QLAVSSNTVTQHQADVDFARLQLSYTEIKAPATGIVSKKNV-QKGQLVQAG 238

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q L  IV +    YI A     Q++ +K G    +    Y      +    +    PI  
Sbjct: 239 QALFSIV-NDNSIYITANFKETQLEDIKTGSKVKIDVDAYPSD---EVLGEVYNFAPITG 294

Query: 376 QQ----DNNLQTQEYYEVILKIT---DLAFSDNNI--ELRNGFPAEVLFTAKN 419
            +      +  T  + +V+ ++     +  +   I  +LR G   +V  + K+
Sbjct: 295 AKGSLLPPDNATGNFVKVVQRVPVKIKITKAPKEILAKLRPGMSVKVSVSIKD 347



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/357 (10%), Positives = 108/357 (30%), Gaps = 24/357 (6%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
            +  K+N    +    L+ +  I G   +        +  +      + ++  + S   G
Sbjct: 3   TEKKKKNKVIPIILGVLIILGAIFGTKEYLYYSKHVDTDDAQ----IDGDISPVVSRVGG 58

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +++   E  + + +G  L+  +D +    ++      K     +   +S +        
Sbjct: 59  YVQEINFEENTHVTEGQVLVKLDDRDYKLKLEQALAGQKGASAGVGVSESQIAATAANTS 118

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             +   E+ + +L      Y    + V +  ++   +       +  S         ++ 
Sbjct: 119 TAKANIEAAKVKLNLAQKDYERYANLVKDGSVTQ--QQFDQAKAQKESAQAAFTAANDQY 176

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +     + + Q  L +  N   ++     D  + +    +        + ++      + 
Sbjct: 177 NAAVKQVGTSQSQLAVSSNTVTQHQAD-VDFARLQLSYTEIKAPATGIVSKKNVQKGQLV 235

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL------SPIAGT 299
           +          +    I+ + ++ Q       SK+ I         +L      +PI G 
Sbjct: 236 QAGQALFSIVNDNSIYITANFKETQLEDIKTGSKVKIDVDAYPSDEVLGEVYNFAPITG- 294

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV--TPKQI-QHVKKGYTATVRFP 353
                  +  +           V   +   ++ K+   PK+I   ++ G +  V   
Sbjct: 295 -------AKGSLLPPDNATGNFVKVVQRVPVKIKITKAPKEILAKLRPGMSVKVSVS 344


>gi|291284017|ref|YP_003500835.1| Multidrug resistance protein A [Escherichia coli O55:H7 str.
           CB9615]
 gi|209762164|gb|ACI79394.1| multidrug resistance secretion protein [Escherichia coli]
 gi|290763890|gb|ADD57851.1| Multidrug resistance protein A [Escherichia coli O55:H7 str.
           CB9615]
          Length = 390

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 79/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +     +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQQMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337


>gi|289624045|ref|ZP_06456999.1| multidrug resistance protein [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289650374|ref|ZP_06481717.1| multidrug resistance protein [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|330866199|gb|EGH00908.1| multidrug resistance protein [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 402

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 84/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   ++ + +  R  + + Q++    ++L    A+SQ
Sbjct: 101 EVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRTAVQTAQENYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +  EL                       + +  +  +   +  +    
Sbjct: 161 EELSHSRDSLTSAQSELNN------------------IQQQLSTSVALVDDTVVSSHPDV 202

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               S+L        + T+++P+ G +   +S       Q     M ++P     +I A 
Sbjct: 203 KAAASQLRQAFLANARSTLVAPVTGYVAK-RSVQLGQRIQPGTATMAVIPLD-QLWIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQ---- 384
               Q+  ++ G    +    Y      K+   I+ +              N        
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGSDV--KYSGTIDSLGSGTGSAFALLPAQNATGNWIKI 318

Query: 385 -EYYEVILKITDLAFSDNNIEL 405
            +   V + I     + + + +
Sbjct: 319 VQRVPVRVHINPEELAKHPLRI 340



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 13/188 (6%)

Query: 10  KRNHPASLKRMTLLS----IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
            +  P   KR  LL     I+ I+GL  W+           + +     NVVEI    +G
Sbjct: 14  SQQTPKPGKRKFLLIGLAFIVVILGLAIWAWYEFYGQWSEETDDAYVNGNVVEITPLVTG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +     ++G  + +G  LL F+  +    +   + ++  +   +    S +D +  +  
Sbjct: 74  TVISIGADDGDLVHEGQVLLKFDPSDAEVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLA 133

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
               A ++ +E              +    G +     L      + S      +++ + 
Sbjct: 134 AQRTAVQTAQENY---------NRRRSLAAGGAISQEELSHSRDSLTSAQSELNNIQQQL 184

Query: 186 SLLRALLS 193
           S   AL+ 
Sbjct: 185 STSVALVD 192


>gi|257485517|ref|ZP_05639558.1| RND family efflux transporter MFP subunit [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 371

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 17/182 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+ P     +  L +  +I +  W I+                IE SV++ G +    
Sbjct: 1   MKRSRPPRRALLVALCLFPVIAVCAWQIMPDSKGHAATVTVTRSNIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  +G I K   + G Q+ +G  L+  +       +D  + +I+NL+  +  ++
Sbjct: 61  YV-DVGSQATGQIMKIHAQVGDQVKEGDLLVEIDPSTQKARLDAARYAIENLKAQLQEQR 119

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +  +    K    ++       +  D       +  +     +      +      +RS 
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAA--ESEFRATQARVDMFKAQILEAQAALRSD 177

Query: 175 YL 176
             
Sbjct: 178 EA 179



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 72/223 (32%), Gaps = 12/223 (5%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIYAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWSSTVRQILPVPPRPLDQANQGGGSPSSARKSGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            V+L    L   +++  L     A++ F A   +    +  P+
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTAQIFFVAG--SAQNTLTAPL 330


>gi|257482775|ref|ZP_05636816.1| multidrug resistance protein [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|330989202|gb|EGH87305.1| multidrug resistance protein [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 402

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 85/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   ++ + +  R  + + Q++    ++L    A+SQ
Sbjct: 101 EVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRTAVQTAQENYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +  EL                       + +  +  +   +  +    
Sbjct: 161 EELSHSRDSLTSAQSELNN------------------IQQQLSTSVALVDDTVVSSHPDV 202

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               S+L        + T+++P+ G +   +S       Q     M ++P     +I A 
Sbjct: 203 KAAASQLRQAFLANARSTLVAPVTGYVAK-RSVQLGQRIQPGTATMAVIPLD-QLWIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--------- 384
               Q+  ++ G    +    Y      K+   I+ +          L  Q         
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGSDV--KYSGTIDSLGAGTGSAFALLPAQNATGNWIKI 318

Query: 385 -EYYEVILKITDLAFSDNNIEL 405
            +   V + I     + + + +
Sbjct: 319 VQRVPVRVHINPEELAKHPLRI 340



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 13/188 (6%)

Query: 10  KRNHPASLKR----MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
            +  P   KR    + L  I+ I+GL  W+           + +     NVVEI    +G
Sbjct: 14  SQQTPKPGKRKFLLIGLAVIVVILGLAIWAWYEFYGQWSEETDDAYVNGNVVEITPLVTG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +     ++G  + +G  LL F+  +    +   + ++  +   +    S +D +  +  
Sbjct: 74  TVISIGADDGDLVHEGQVLLKFDPSDAEVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLA 133

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
               A ++ +E              +    G +     L      + S      +++ + 
Sbjct: 134 AQRTAVQTAQENY---------NRRRSLAAGGAISQEELSHSRDSLTSAQSELNNIQQQL 184

Query: 186 SLLRALLS 193
           S   AL+ 
Sbjct: 185 STSVALVD 192


>gi|332881183|ref|ZP_08448840.1| efflux transporter, RND family, MFP subunit [Capnocytophaga sp.
           oral taxon 329 str. F0087]
 gi|332680875|gb|EGJ53815.1| efflux transporter, RND family, MFP subunit [Capnocytophaga sp.
           oral taxon 329 str. F0087]
          Length = 409

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 71/216 (32%), Gaps = 18/216 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL--KEISRDL 266
             +++ D    +  V  +T      ++E     ++ +      N +  +    ++    L
Sbjct: 86  QLLAELDKTNLQENVINATANYNSALNELNYYQQNYDRQKKMYNAQVISQQDYEQALYQL 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVP 323
              + + A  ++ L   +       I SPI G I+  +          S     L KI  
Sbjct: 146 NNAKASVAQRLTTLNQAKTNLGYANIYSPIDGIILSKEV-EEGQTVAASMSAPTLFKIAK 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             K   +   V    I  VK G   +     Y      +F   + ++  +     +N+ T
Sbjct: 205 DIKRMQVEVNVDEADIGQVKVGQRVSFTVDAYPQE---EFVGRVTQV-RLSPTTSSNVVT 260

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              Y VI++       + + +L+ G  A +      
Sbjct: 261 ---YTVIVE-----AENPDEKLKPGLTATIAIYTNE 288



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 64/175 (36%), Gaps = 1/175 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+++G +   D V E+ +  SG++ K  V+  SQ+ +G  L   +     + +     + 
Sbjct: 49  VTATGSVQPVDEV-EVGTQVSGLVSKIYVDYNSQVKKGQLLAELDKTNLQENVINATANY 107

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            +    ++  +   D     Y+    + +  E+ L        S   ++     +     
Sbjct: 108 NSALNELNYYQQNYDRQKKMYNAQVISQQDYEQALYQLNNAKASVAQRLTTLNQAKTNLG 167

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                + +  I L++   E ++        +  K    +K +  +  V + D+ Q
Sbjct: 168 YANIYSPIDGIILSKEVEEGQTVAASMSAPTLFKIAKDIKRMQVEVNVDEADIGQ 222


>gi|255318339|ref|ZP_05359574.1| secretion protein HlyD [Acinetobacter radioresistens SK82]
 gi|262379082|ref|ZP_06072238.1| secretion protein HlyD [Acinetobacter radioresistens SH164]
 gi|255304651|gb|EET83833.1| secretion protein HlyD [Acinetobacter radioresistens SK82]
 gi|262298539|gb|EEY86452.1| secretion protein HlyD [Acinetobacter radioresistens SH164]
          Length = 381

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 92/311 (29%), Gaps = 15/311 (4%)

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           H   E++   ++  +  +L        +Q++     Y      +      +    +    
Sbjct: 70  HTAIERTDNSYVKGQTTILSSQINGYIQQVMVKDFDYVKKGQPLLRIDAKTYGEQVVQAE 129

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             +     N  + E   +  RA +++ Q  +  +K  +E          Q       S  
Sbjct: 130 AAVEQAENNLANQEQAIAQHRADIAAAQAQVEQVKAQYELARSQLQRYQQLGNSGAASKT 189

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E      + KN    + +      +            +   +    +  ++    + T+ 
Sbjct: 190 EQDRAAADVKNAQAQLRQAEANVEVAREALKTAQVAQIG-LKAQVKNAQAQQAQAQTTQN 248

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              I +P+ G  +   +     Y      L+ ++P        A     QI ++K G  A
Sbjct: 249 YSLISAPMDGQ-LGEVNPRVGQYVAAGSQLLFLIPKQTWVI--ANFKETQIANMKVGQKA 305

Query: 349 TVRFPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSD 400
           +       D +   F   +E+I P        I +       T+    + ++I       
Sbjct: 306 SFTVDALNDRQ---FTGRVERIAPAAGSEFSVIKADNATGNFTKVVQRISVRIAIDPNQP 362

Query: 401 NNIELRNGFPA 411
              +LR G   
Sbjct: 363 GIKDLRPGMSV 373



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 68/198 (34%), Gaps = 5/198 (2%)

Query: 14  PASLKRMTLLSIIGIIGL--ITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P     +  + ++ IIG+  I W+  L P   ++  +     +     + S  +G I++ 
Sbjct: 40  PTRHSTLFWMLLVLIIGITIILWAWRLGPFHTAIERTDNSYVKGQTTILSSQINGYIQQV 99

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V++   + +G PLL  +     + +   + +++    ++  ++ A+          +  
Sbjct: 100 MVKDFDYVKKGQPLLRIDAKTYGEQVVQAEAAVEQAENNLANQEQAIAQHRADIAAAQAQ 159

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            E  + Q    L +      +      ++           +++        E    + R 
Sbjct: 160 VEQVKAQY--ELARSQLQRYQQLGNSGAASKTEQDRAAADVKNAQAQLRQAEANVEVARE 217

Query: 191 LLSSHQKDLTMMKNLFEK 208
            L + Q     +K   + 
Sbjct: 218 ALKTAQVAQIGLKAQVKN 235


>gi|329956787|ref|ZP_08297356.1| auxiliary transport protein, membrane fusion protein family protein
           [Bacteroides clarus YIT 12056]
 gi|328523826|gb|EGF50913.1| auxiliary transport protein, membrane fusion protein family protein
           [Bacteroides clarus YIT 12056]
          Length = 363

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/360 (13%), Positives = 108/360 (30%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IKK       ++ +G  LL  +D E    +   + ++K+ +       + L      
Sbjct: 75  SGYIKKIYFTEHQEVRKGDTLLVLDDREYKIRVMEAEAALKDAQAGATVIGATLQTTQTT 134

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             V + +                                 ++++L ++        +L  
Sbjct: 135 ASVYDASIS------------------------------EIEIRLAKLEKDRQRYQNLVQ 164

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +++     L   + +    +                         +L     +QK  L  
Sbjct: 165 RNAATPIQLEQIETEYEATRK------------------------KLEATKRQQKAALSG 200

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +NE               +S   E  +       + L +         + +P  G  +  
Sbjct: 201 VNE---------------VSHRRESTEAAIQRATAALEMARLNLSYTVVTAPCDGK-LGR 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     +    Q +  I+P ++   + A     Q+++++ G    +     +D   K+F
Sbjct: 245 RTLEEGQFITAGQTITYILPDTQKWIV-ANYKETQVENLRIGQEVAITVDAISD---KEF 300

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
              I  I           P  +   N ++ Q+   V +  T L+  +N  +L  G    V
Sbjct: 301 TGTITAISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTHLSKEENG-KLAAGMMVIV 359


>gi|167577939|ref|ZP_02370813.1| HlyD family secretion protein [Burkholderia thailandensis TXDOH]
          Length = 385

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 83/270 (30%), Gaps = 37/270 (13%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +V+         ++ ++  ++ +   N   LE+     R  L   + D      L  ++A
Sbjct: 141 RVYRRQTDIDRANVDVQAAQVEANRSNVAALEHGVLSDRFDLDEKRLDFVRADTLARQSA 200

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VSQ                   ++ +            DEA L  A        D+    
Sbjct: 201 VSQQ----------------SRDLAQTAARQSAAALARDEALLAAA------RNDVALAV 238

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A   +K  + E T     + +P  G I   +       A     +  I       ++
Sbjct: 239 AGVAAAQAKRKLDETTLSYTELAAPFDGVI-AVRHAELGQLAGPGVAIFTIAELDH-VWL 296

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V    +  ++ G  A VR   Y     +     I  + P       + + +  +  +
Sbjct: 297 RAYVNEPDVGRIRLGEPADVRTDAYPSAVYR---GRISFVSPQAEFTPKTVETHEERVTQ 353

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            Y V + I +        EL  G PA+   
Sbjct: 354 VYRVRIDIDNPT-----HELLPGMPADATI 378


>gi|332711371|ref|ZP_08431303.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
 gi|332349920|gb|EGJ29528.1| multidrug resistance efflux pump [Lyngbya majuscula 3L]
          Length = 484

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/381 (13%), Positives = 120/381 (31%), Gaps = 77/381 (20%)

Query: 40  IEISVSSSGEILNED-------NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           +     SS ++  +        +   + +P +G + + +++ G +I QG  +   + +  
Sbjct: 34  LAEVKRSSLQVTVDGEGKTRIRSRFVVSAPVAGRLARIKLDEGDKIKQGAIIAQIDRLPL 93

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +   +  ++  +     E+  +     K +                           
Sbjct: 94  DADVREAQARLRQWQA----ERDGVATKRPKPE--------------------------- 122

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                     +L     R+RS    + + + +     A L   ++D    + L+   A+S
Sbjct: 123 ----------ALFQAQARIRSAAAQQQEAQARVQQALAALEQAKRDRQRSQQLYIDGAIS 172

Query: 213 QNDLNQQERIVYKSTLELRENIHE-----QKNMLRHINELYDEANLEFANYLKEISRDLE 267
           + DL   + +      EL     E      + +         +A     +YL ++     
Sbjct: 173 RKDLETAQLLETTCQRELEAARREVDSVAAEVVAAKEARAILQAEQRDPDYLLDVYN--- 229

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSK 326
                 A   ++L  L     +  I SPI G ++     S+  Y +   PL+++  P   
Sbjct: 230 ---ARIASVQAELAKLADEAARAEIHSPIDGYVLRVLEESAR-YVEAGTPLLELGNPADL 285

Query: 327 LTYIRAKVTPKQIQHVKKG-------------YTATVRF-PHYADIREKKFKAIIEKIDP 372
              +   +       VK G               A V++       +        ++++ 
Sbjct: 286 EIVVD--LLSTDAVKVKPGAKMFIEHWGGERTLNAQVKYVEPSGFTKISALGVEEQRVNA 343

Query: 373 IISQQDNNLQTQEYYEVILKI 393
           I +  D+ +   + Y V  +I
Sbjct: 344 IANFVDSPIPLGDRYRVETRI 364


>gi|325279065|ref|YP_004251607.1| efflux transporter, RND family, MFP subunit [Odoribacter
           splanchnicus DSM 20712]
 gi|324310874|gb|ADY31427.1| efflux transporter, RND family, MFP subunit [Odoribacter
           splanchnicus DSM 20712]
          Length = 402

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 77/223 (34%), Gaps = 19/223 (8%)

Query: 204 NLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLK 260
           ++ +K   +++ D    +  +     +L     E +   ++        E  L   +  +
Sbjct: 79  SVVKKGQLIAEMDKVTLQAELESQEAQLANAKAEYEYQQKNYARSKVLFEKQLISDSDYE 138

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QP 317
           E + + E+ + T+    + +  + +      I SPI G ++  +                
Sbjct: 139 EATYNYEKAKSTYEKSKADIVKVRRNLGYAVITSPIDGVVISREV-EEGQTVAAGFETPT 197

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L  I        + A V    I  +++G   T     Y   R   F+ ++ ++    + +
Sbjct: 198 LFTIAKDLTEMQVIADVDEADIGEIREGQRVTFTVDAY---RNDAFEGVVTQVRLEATVE 254

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            N +     YEV++        + +++L+ G  A V       
Sbjct: 255 SNVVT----YEVVISAP-----NPDLKLKPGLTATVSIYTLEK 288



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 67/183 (36%), Gaps = 4/183 (2%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            V ++G +     V ++ +  SGII +  V+  S + +G  +   + +     ++ ++  
Sbjct: 47  VVVATGTVEPVTKV-DVGTQVSGIIDRIYVDYNSVVKKGQLIAEMDKVTLQAELESQEAQ 105

Query: 103 IKNLRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + N +   + ++   +    L  K  + +  +E            Y  + + +     + 
Sbjct: 106 LANAKAEYEYQQKNYARSKVLFEKQLISDSDYEEATYNYEKAKSTYEKSKADIVKVRRNL 165

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            Y  +   +  +             +      L +  KDLT M+ + + +     ++ + 
Sbjct: 166 GYAVITSPIDGVVISREVEEGQTVAAGFETPTLFTIAKDLTEMQVIADVDEADIGEIREG 225

Query: 220 ERI 222
           +R+
Sbjct: 226 QRV 228


>gi|313498891|gb|ADR60257.1| Secretion protein HlyD family protein [Pseudomonas putida BIRD-1]
          Length = 377

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/322 (12%), Positives = 97/322 (30%), Gaps = 31/322 (9%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R  +      L        V +  F    + L+    + +       +  +     +L  
Sbjct: 76  RGQVTIIGPQLSGYVVDVPVHDFQFVKAGDLLVQLDDRIYKQRLAQASAQLQQQLAALAN 135

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              + +S        +       A  +  + DL   + L    +VS+ DL          
Sbjct: 136 NQQQRKSAEATIAQRQAAIGDAAAQAAKAKADLGRNQALVNDGSVSRRDL---------- 185

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKE-ISRDLEQNQRTFADEMSKLTILEK 285
                 ++          +     A LE A   +E +  +    + +  +  + + +   
Sbjct: 186 ------DLARASEAAAVASLAQARAALEIARQDREAVVVNRAALEASVENAKAAVELARI 239

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             +   + +P  G +    +     Y      LM +VP     ++ A +   Q+ +V+ G
Sbjct: 240 DLDNTRVTAPRDGQLGQIGTR-LGAYVNSGAQLMALVP--DTLWVIANMKETQMANVRIG 296

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLA 397
              +         +    +  +++I P    +      +  T  + ++     ++IT  A
Sbjct: 297 QPVSFTVDALNHRK---LRGHVQQISPATGSEFALLQADNATGNFVKIAQRIPVRITVDA 353

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
                  LR G    V    ++
Sbjct: 354 DQPTARHLRPGMSVVVSIDTRD 375


>gi|332828921|gb|EGK01604.1| hypothetical protein HMPREF9455_02136 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 299

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 99/283 (34%), Gaps = 33/283 (11%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++      +  QL    G+      ++       +Y      L  M+S+     D+  + 
Sbjct: 38  IVSAEANGKIMQLDITEGQLLDAGREIGYIDTVQLYLKKMQLLANMKSVKTRYTDVPRQI 97

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  +  +++ + +L   +NL + NA +Q  ++     +     +L       +N  R ++
Sbjct: 98  AATKQQIATQRNELKRFENLVKSNAANQKQVDDINAQILVLERQLAAQTETLENSNRGVS 157

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E     +++ A                          L    ++  + SPI GT++  + 
Sbjct: 158 EESTGLDIQVAQ-------------------------LNDQLQKSIVTSPIKGTVLS-KY 191

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A Q + L KI       ++RA +T  Q+  VK G    V F  + +   K++  
Sbjct: 192 AEQGELATQGRVLFKIA-DMDNMFLRAYITSGQLTEVKIGQQVRV-FADFGEKDMKEYAG 249

Query: 366 IIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            I  I         + Q  + +    Y V + + +  +    +
Sbjct: 250 TITWISDKSEFTPKTIQTRDERANLVYAVKIAVKNDGYLKKGM 292


>gi|328953897|ref|YP_004371231.1| efflux transporter, RND family, MFP subunit [Desulfobacca
           acetoxidans DSM 11109]
 gi|328454221|gb|AEB10050.1| efflux transporter, RND family, MFP subunit [Desulfobacca
           acetoxidans DSM 11109]
          Length = 405

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 75/213 (35%), Gaps = 16/213 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-ISRDLEQNQ 270
           S  +L + E    K+ L L  +  ++   L     L  E +L+    L E    +    Q
Sbjct: 121 SALELARAEVEKAKTNLSLATSQFKRYESLWR-QRLVSELDLDNNRALYETAQAEFRAAQ 179

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLT 328
              +   ++LT  E       I SP+ G ++              Q   L  I       
Sbjct: 180 ARASQAAAQLTEAETNLGYTNITSPVNGIVISRNVEVGRTVVASFQTPTLFTIAQDLTQM 239

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            + A V   ++  +K G  AT     Y D   K F   I+++  +  Q   N+ T   Y 
Sbjct: 240 QVEAAVDGAEVGDIKVGQAATFTVDAYTD---KVFSGKIDQV-RLAPQTTQNVVT---YT 292

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           V+++       + ++ L+ G  A V       T
Sbjct: 293 VLIQTP-----NPDLLLKPGMIATVTILTDART 320



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 1/102 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV +SG I   + V  + +  SGIIK+  V+  S++ +G  +   +       +D  
Sbjct: 61  LQQSVVASGAINPIETV-LVGAQVSGIIKEILVDYNSEVRRGKVIARIDPRVFEAKVDQC 119

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           + +++  R  ++  K+ L    +++   E  +  R    LD 
Sbjct: 120 RSALELARAEVEKAKTNLSLATSQFKRYESLWRQRLVSELDL 161


>gi|156348351|ref|XP_001621817.1| hypothetical protein NEMVEDRAFT_v1g221549 [Nematostella vectensis]
 gi|156208093|gb|EDO29717.1| predicted protein [Nematostella vectensis]
          Length = 212

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/178 (11%), Positives = 51/178 (28%), Gaps = 16/178 (8%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L  I+  Y E + + ++  +         +       ++ T  +       I +P  G 
Sbjct: 2   ELNRISAEYAEKSAKASSDKQTALSSQFDTEAQIGKLKNQYTNYQIRNGLYYITAPQDGY 61

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV--------R 351
           +            ++   ++ I+P      +   + P     + KG    V         
Sbjct: 62  VNRAIQSGIGETIKEGTSIVSIMPAQFEIAVETYIDPVDFPLINKGQKVRVWFDGWPTIV 121

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-DNNIELRNG 408
           F  +       F  ++   +  IS+          Y V++       +    + +  G
Sbjct: 122 FSGWPGASYGTFGGVVVAKESFISENGK-------YRVLIAPDKEEKNWPKQLSIGAG 172


>gi|148987771|ref|ZP_01819234.1| fatty acid/phospholipid synthesis protein [Streptococcus pneumoniae
           SP6-BS73]
 gi|147926235|gb|EDK77308.1| fatty acid/phospholipid synthesis protein [Streptococcus pneumoniae
           SP6-BS73]
          Length = 449

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/439 (10%), Positives = 146/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV------SQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               + +  +    +L  +N         ++   +  +   ++  ++   I + ++ L  
Sbjct: 189 RDYQTAKSAIETGASLAGQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 244 INELY--------------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               Y               +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|330959922|gb|EGH60182.1| secretion protein HlyD family protein [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 343

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 91/308 (29%), Gaps = 14/308 (4%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            ++     ++      +  ++L    +       +          +       + +    
Sbjct: 38  AYVRADSVLISARLPGQVTKVLVDDNQAVKAGQILAELDDRDFLVARASAAATVSAAKAQ 97

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            L+L+       A++              +   V+Q            +  E ++   E 
Sbjct: 98  LLNLQASIERQAAVIDQAAATTRATAASLKFAQVNQQRYLNLSNAGAGTQQERQKAESEL 157

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           ++      +  + + +     L  +   LE  +   A + + L+  E       I +P  
Sbjct: 158 QSWQAS-RDRDEASRVAATKTLDVLKAQLEAAKAELAKDQAALSQAELNVSYTRITAPQD 216

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   +S     Y  Q QPLM +VP  +   + A     Q+  +       +      D
Sbjct: 217 GMV-GLRSVRVGAYVSQGQPLMAVVPLHEAFVV-ANFRETQLARMVMNQAVELHVDSIPD 274

Query: 358 IREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGF 409
                F+  IE + P      S+   +  T  + +V+ +I      + N      LR G 
Sbjct: 275 H---SFRGHIESVAPATGVSFSEIAPDNATGNFTKVVQRIPVKIMFEPNQADLDRLRIGM 331

Query: 410 PAEVLFTA 417
                   
Sbjct: 332 SVVASVDT 339



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 53/168 (31%), Gaps = 4/168 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + V I +   G + K  V++   +  G  L   +D +          ++   +  + 
Sbjct: 40  VRADSVLISARLPGQVTKVLVDDNQAVKAGQILAELDDRDFLVARASAAATVSAAKAQLL 99

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +++++      D       +    L     + +       +   +   +  +   + +
Sbjct: 100 NLQASIERQAAVIDQAAATTRATAASLK--FAQVNQQRYLNLSNAGAGTQQERQKAESEL 157

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK--NAVSQNDLN 217
           +S   +R   E         L   +  L   K    K   A+SQ +LN
Sbjct: 158 QSWQASRDRDEASRVAATKTLDVLKAQLEAAKAELAKDQAALSQAELN 205


>gi|330831409|ref|YP_004394361.1| HlyD family secretion protein [Aeromonas veronii B565]
 gi|328806545|gb|AEB51744.1| HlyD family secretion protein [Aeromonas veronii B565]
          Length = 350

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 100/362 (27%), Gaps = 82/362 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I++  V +   +  G  +   +D E    +   +  ++  +                 
Sbjct: 54  GYIREVLVTDNQPVKAGQLIARLDDREYKTRVAEAEADLRLNQA---------------- 97

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E    +R +QL                    S+ +  + K+    +  L      N+
Sbjct: 98  -TAENLAATRTQQL--------------------SLIQQAEAKVASANAEQLRASQQVNR 136

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S L     S Q  L  ++   + N     +     +   +  L L     +    L   
Sbjct: 137 ISQLNQRHYSSQDSLDEVRAGLQVNQAQAREAQAALQAARERLLVLDAERKQNLAKLALS 196

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               ++A LE                                     + +P  G I   +
Sbjct: 197 EAQLEQAKLE--------------------------------LGYTELRAPADGII-GKR 223

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           S     Y Q    +  +VP  +  ++ A     Q+ H++ G    V    Y D      +
Sbjct: 224 SLREGLYVQSGMQVASLVPL-QQVWVEANFKETQLAHMQPGQKVEVVLDAYPDQ---PVE 279

Query: 365 AIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            II+ + P           +      T+    V +KI          +L  G   EV+  
Sbjct: 280 GIIDSLAPATGAKFALLPPENATGNFTKIVQRVPVKIRIPEPGPLAGKLLPGLSTEVIVD 339

Query: 417 AK 418
            +
Sbjct: 340 TR 341


>gi|256819230|ref|YP_003140509.1| efflux transporter, RND family, MFP subunit [Capnocytophaga
           ochracea DSM 7271]
 gi|256580813|gb|ACU91948.1| efflux transporter, RND family, MFP subunit [Capnocytophaga
           ochracea DSM 7271]
          Length = 409

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 73/220 (33%), Gaps = 19/220 (8%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEI 262
            +K   +++ D    + +V  +T   +  ++E     ++        N +  +    ++ 
Sbjct: 82  VKKGQLLAELDKTNLQEMVVNATANYQSALNELNYYRQNYERQQKMYNAQVISKSDYEQA 141

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLM 319
                  +   A  ++ L   +       I SPI G I+  +          S     L 
Sbjct: 142 LYQFNNAKTNVAQRLTTLNQAKTNLGYANIYSPINGIILSKEV-EEGQTVAASMSAPTLF 200

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           KI    K   + A V    I  VK G   +     Y      +F   + ++  +     +
Sbjct: 201 KIAKDIKRMQVEADVDEADIGQVKVGQRVSFTVDAYPQE---EFSGKVTQV-RLSPTTTS 256

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           N+ T   Y VI++       + + +L+ G  A +      
Sbjct: 257 NVVT---YTVIVE-----AENPDEKLKPGLTATIAIYTNE 288



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 66/175 (37%), Gaps = 1/175 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+++G +   D V E+ +  SG++ K  V+  SQ+ +G  L   +     +++     + 
Sbjct: 49  VTATGSVQPVDEV-EVGTQVSGLVSKIYVDYNSQVKKGQLLAELDKTNLQEMVVNATANY 107

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           ++    ++  +   +     Y+    +    E+ L  F     +   ++     +     
Sbjct: 108 QSALNELNYYRQNYERQQKMYNAQVISKSDYEQALYQFNNAKTNVAQRLTTLNQAKTNLG 167

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                + +  I L++   E ++        +  K    +K +  +  V + D+ Q
Sbjct: 168 YANIYSPINGIILSKEVEEGQTVAASMSAPTLFKIAKDIKRMQVEADVDEADIGQ 222


>gi|160939839|ref|ZP_02087186.1| hypothetical protein CLOBOL_04730 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437273|gb|EDP15038.1| hypothetical protein CLOBOL_04730 [Clostridium bolteae ATCC
           BAA-613]
          Length = 596

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/386 (10%), Positives = 115/386 (29%), Gaps = 53/386 (13%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID-TEKSALDFLNN--------- 122
           E G Q+ +   L   +       +     S+   +   +   +   D L +         
Sbjct: 118 EEGDQVEKDQVLYEIDKSSMESQLTSSVNSLSRSQSSYEDALEDYNDALGDYSGNTYKAT 177

Query: 123 --------------KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV--YRSLKM 166
                         K     K  +   + +++    + S  + +   G+ +         
Sbjct: 178 DTGYIKELYISAGDKVSGNTKLADVYSDDVMEIRIPFLSGEAAMIGAGMPAAVTLTDTGE 237

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ---NDLNQQERIV 223
           ++        N+  +     L+R +    Q    +  +L     + +   ++    E  V
Sbjct: 238 QVAGTVKAVANQETVLTGGRLVRVVTIQVQNPGGLTTSLRATAQIGEFIGSEDGAFEASV 297

Query: 224 YKSTLELRENIHEQKNMLRHINELYDE-------ANLEFANYLKEISRDLEQNQRTFADE 276
             +         E +++L ++ +   +        +      ++     L++ + +    
Sbjct: 298 DTTMNADLSTSVEVESLLVNVGDYVTKGTPVFKMTDKSADKLIQSYKDALDKAEESVESA 357

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA---QQSQPLMKIVPHSKLTYIRAK 333
            +KL   + + +  TI +PI+G ++  ++F   +       S  ++  +           
Sbjct: 358 QNKLDSTQDSYDNYTIKAPISGQVIT-KNFKVGDNITKNSSSTTVLATIYDLSSLTFEMS 416

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +    I+ VK G    V    +       F   +  +      +         Y V + +
Sbjct: 417 IDELDIKKVKVGQKVEVSADAFEGQT---FSGTVTNVSL----ESTYSNGVSTYPVTVTL 469

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN 419
            D+       +L  G   + + T + 
Sbjct: 470 DDMG------DLLPGMNVDGVITLEE 489


>gi|16130597|ref|NP_417170.1| multidrug efflux system [Escherichia coli str. K-12 substr. MG1655]
 gi|89109477|ref|AP_003257.1| multidrug efflux system [Escherichia coli str. K-12 substr. W3110]
 gi|170082267|ref|YP_001731587.1| multidrug efflux system [Escherichia coli str. K-12 substr. DH10B]
 gi|238901827|ref|YP_002927623.1| multidrug efflux system [Escherichia coli BW2952]
 gi|256024804|ref|ZP_05438669.1| multidrug efflux system [Escherichia sp. 4_1_40B]
 gi|300949081|ref|ZP_07163128.1| efflux pump membrane protein [Escherichia coli MS 116-1]
 gi|300957456|ref|ZP_07169669.1| efflux pump membrane protein [Escherichia coli MS 175-1]
 gi|301645337|ref|ZP_07245284.1| efflux pump membrane protein [Escherichia coli MS 146-1]
 gi|2506508|sp|P27303|EMRA_ECOLI RecName: Full=Multidrug resistance protein A
 gi|1789041|gb|AAC75732.1| multidrug efflux system [Escherichia coli str. K-12 substr. MG1655]
 gi|1800070|dbj|BAA16547.1| multidrug efflux system [Escherichia coli str. K12 substr. W3110]
 gi|169890102|gb|ACB03809.1| multidrug efflux system [Escherichia coli str. K-12 substr. DH10B]
 gi|238861809|gb|ACR63807.1| multidrug efflux system [Escherichia coli BW2952]
 gi|260448259|gb|ACX38681.1| efflux pump membrane protein [Escherichia coli DH1]
 gi|300315812|gb|EFJ65596.1| efflux pump membrane protein [Escherichia coli MS 175-1]
 gi|300451467|gb|EFK15087.1| efflux pump membrane protein [Escherichia coli MS 116-1]
 gi|301076371|gb|EFK91177.1| efflux pump membrane protein [Escherichia coli MS 146-1]
 gi|315137298|dbj|BAJ44457.1| multidrug efflux system [Escherichia coli DH1]
          Length = 390

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIISPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 32  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 85  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 144

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 145 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 204

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 205 EVRNAWLALERT 216


>gi|161502136|ref|YP_001569248.1| hypothetical protein SARI_00159 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863483|gb|ABX20106.1| hypothetical protein SARI_00159 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 399

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 81/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 107 RQAFERAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDFNRRVPLGNANLIGR 166

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 167 EELQHARDAVASAQAKLDAAIQQYNANQAMILNSKLEDQPAVQQAATEVRNAWL------ 220

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 221 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDAN 266

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 267 FKETQLANMRIGQPVTIITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 324

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++       + + +
Sbjct: 325 VQRLPVRVELDARQLEQHPLRI 346



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 52/164 (31%), Gaps = 3/164 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 66  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDARQAFERAKTALASSVRQTH 125

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +      +   ++     +   +   +V  +      
Sbjct: 126 QLMINSKQLQANIDVQKTALAQAQSDFNRRVPLGNANLIGREELQHARDAVASAQAKLDA 185

Query: 170 RMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            ++    N+   L +K     A+  +  +       L     VS
Sbjct: 186 AIQQYNANQAMILNSKLEDQPAVQQAATEVRNAWLALERTRIVS 229


>gi|150017763|ref|YP_001310017.1| RND family efflux transporter MFP subunit [Clostridium beijerinckii
           NCIMB 8052]
 gi|149904228|gb|ABR35061.1| efflux transporter, RND family, MFP subunit [Clostridium
           beijerinckii NCIMB 8052]
          Length = 420

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 95/320 (29%), Gaps = 34/320 (10%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             + +   +E      ++K +    +  ++  +     + +K      +      Q ++ 
Sbjct: 38  QAVASKTSVEVQTAKTVEKNTGDTYKASLEAVQQG--TVTSKIAAKIVSVLVENGQYVNA 95

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                +   +     I +    + +   ++     +    +      +  L   Q++   
Sbjct: 96  GDTIATLDDQDIQNSIKTAQAQIAVNEKQVEVAEQSLNVSQAALEKYKINLDDAQRNYER 155

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            K LF+  A+SQ DL   E+ +  +  +        ++    I     +ANLE       
Sbjct: 156 QKTLFDGGAISQTDLQAAEKTLNSAKADYDSGNASIQSSQASIE--TSKANLEAQKVA-- 211

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               L +NQ   A                 I +PI+G I           A     L  I
Sbjct: 212 ----LAKNQSDLA--------------NIVIKAPISGVISGKSMN-IGQMASTGTALA-I 251

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V      Y   +V  ++I  VK G  ATV                I+ ID          
Sbjct: 252 VNDVSSVYATIQVPQEKISEVKIGQGATVIVEGSDQTH----NGTIQTIDAAADPTSRVF 307

Query: 382 QTQEYYEVILKITDLAFSDN 401
                 +V +  +D +    
Sbjct: 308 NC----KVKIDNSDKSLLPG 323



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 68/216 (31%), Gaps = 15/216 (6%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
               G + ++     +            VENG  +  G  + T +D +  + I   +  I
Sbjct: 68  AVQQGTVTSKIAAKIV---------SVLVENGQYVNAGDTIATLDDQDIQNSIKTAQAQI 118

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH--STCSKVFNYGISSVY 161
                 ++  + +L+      +  +   +  +         +   +           ++ 
Sbjct: 119 AVNEKQVEVAEQSLNVSQAALEKYKINLDDAQRNYERQKTLFDGGAISQTDLQAAEKTLN 178

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK----NAVSQNDLN 217
            +     +   SI  ++  +E   + L A   +  K+ + + N+  K      +S   +N
Sbjct: 179 SAKADYDSGNASIQSSQASIETSKANLEAQKVALAKNQSDLANIVIKAPISGVISGKSMN 238

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +     + L +  ++      ++   E   E  +
Sbjct: 239 IGQMASTGTALAIVNDVSSVYATIQVPQEKISEVKI 274


>gi|288929056|ref|ZP_06422902.1| HlyD family secretion protein [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330040|gb|EFC68625.1| HlyD family secretion protein [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 297

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 87/242 (35%), Gaps = 39/242 (16%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            R D++ + ++ +  +S    +    + L ++ A +   L+  E  V     +L+  I  
Sbjct: 88  QRPDIQAQIAVTKQQISKALVEQRRTQALLKEGAATSKQLDDAENAVAVLQKQLQGQISL 147

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +N  R +N     A+++    +                            E+  I SPI
Sbjct: 148 LQNSTRSLNSQMSGADIQRYEVM-------------------------DQLEKCHIKSPI 182

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT++  +      +    +PL K V   +   +RA +T  Q+  V+ G    V F  Y 
Sbjct: 183 TGTVLE-KYAEQGEFTSIGRPLFK-VADIRNMTLRAYITSIQLAKVRLGQRVKV-FADYG 239

Query: 357 DIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           D     ++  I  I P           ++ +  + Y V + +       NN  ++ G   
Sbjct: 240 DDTRHAYEGTITWISPKAEFTPKSILTDDERADQVYAVKVSV------KNNGYIKIGMYG 293

Query: 412 EV 413
           EV
Sbjct: 294 EV 295


>gi|144898117|emb|CAM74981.1| Secretion protein HlyD [Magnetospirillum gryphiswaldense MSR-1]
          Length = 336

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 69/215 (32%), Gaps = 19/215 (8%)

Query: 207 EKNAVSQNDLNQQERIVYKST-LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +  V + D+ ++ + + +    E    ++E +    +  E    A    A+        
Sbjct: 72  AEMLVDEGDVVKRGQHLARLDDREASAKVNELEARAVYWREELARAKT-LADSGIRPRES 130

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
            ++ +  +    + +    + R    +++P+ G ++  +        +    +  I   S
Sbjct: 131 AQKAKSEYDQANAAINAARQRRTDLLVIAPLDGVVLR-RDGEPGEVVKPENTIFWIG-ES 188

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           +   I A V  + I  V  G    ++   + D         I+ I P     +       
Sbjct: 189 RPLRITADVDEEDIALVASGQKVLIKADAFPDS---GLGGTIDHITPKGDPVNKT----- 240

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + V +++ D      +  L  G   E+       
Sbjct: 241 -FRVRVRLPD------DTPLLIGMTTEINIITAEK 268



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 1/119 (0%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +V ++G +  E+    I    +G I +  V+ G  + +G  L   +D E +  ++  + 
Sbjct: 47  EAVYATGTVEPENWAK-IGPVTTGRIAEMLVDEGDVVKRGQHLARLDDREASAKVNELEA 105

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                R  +   K+  D      +  +KA    ++               +    +  V
Sbjct: 106 RAVYWREELARAKTLADSGIRPRESAQKAKSEYDQANAAINAARQRRTDLLVIAPLDGV 164


>gi|71737090|ref|YP_275702.1| multidrug resistance protein [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71557643|gb|AAZ36854.1| multidrug resistance protein [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 402

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 85/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   ++ + +  R  + + Q++    ++L    A+SQ
Sbjct: 101 EVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRTAVQTAQENYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +  EL                       + +  +  +   +  +    
Sbjct: 161 EELSHSRDSLTSAQSELNN------------------IQQQLSTSVALVDDTVVSSHPDV 202

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               S+L        + T+++P+ G +   +S       Q     M ++P     +I A 
Sbjct: 203 KAAASQLRQAFLANARSTLVAPVTGYVAK-RSVQLGQRIQPGTATMAVIPLD-QLWIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--------- 384
               Q+  ++ G    +    Y      K+   I+ +          L  Q         
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGSDV--KYSGTIDSLGAGTGSAFALLPAQNATGNWIKI 318

Query: 385 -EYYEVILKITDLAFSDNNIEL 405
            +   V + I     + + + +
Sbjct: 319 VQRVPVRVHINPEELAKHPLRI 340



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 13/188 (6%)

Query: 10  KRNHPASLKR----MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
            +  P   KR    + L  I+ I+GL  W+           + +     NVVEI    +G
Sbjct: 14  SQQTPKPGKRKFLLIGLAVIVVILGLAIWAWYEFYGQWSEETDDAYVNGNVVEITLLVTG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +     ++G  + +G  LL F+  +    +   + ++  +   +    S +D +  +  
Sbjct: 74  TVISIGADDGDLVHEGQVLLKFDPSDAEVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLA 133

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
               A ++ +E              +    G +     L      + S      +++ + 
Sbjct: 134 AQRTAVQTAQENY---------NRRRSLAAGGAISQEELSHSRDSLTSAQSELNNIQQQL 184

Query: 186 SLLRALLS 193
           S   AL+ 
Sbjct: 185 STSVALVD 192


>gi|284053848|ref|ZP_06384058.1| RND family efflux transporter MFP subunit [Arthrospira platensis
           str. Paraca]
          Length = 304

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 85/234 (36%), Gaps = 13/234 (5%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + V +SG +      V +     G + +  VE G ++  G  +   E  E        
Sbjct: 77  LTVIVRASGVVQPV-RRVNLSPKTQGRLAQLYVEQGDRVEAGQIIARMESNELEAQRLQA 135

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  ++  + ++   +       ++ + +  A  +R E+ L  L +  +   +      S+
Sbjct: 136 QARLERAQANLAKLRQG-----SRPEAIASA-RARLERTLARLAELQAGTRQEEIAVASA 189

Query: 160 VYRSLKMKLTRMR--SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
             R  +++L   R  S+       +++     A L   Q  +   + L  + AVS++ L+
Sbjct: 190 RLREAEIRLFDARSGSLQNEIDQAQSRIQANLAELELAQGRVQRYEELKSQGAVSEDTLD 249

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
              R   +    L     E K  L  + E            +++  ++L Q Q 
Sbjct: 250 GYRRDQRR----LEALQDEAKQRLAQLQENRRSQIERLEATVEQERQNLRQLQN 299


>gi|284009256|emb|CBA76368.1| multidrug resistance protein A [Arsenophonus nasoniae]
          Length = 388

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 87/273 (31%), Gaps = 30/273 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + +     +N    +   SL R+ L+  Q+DL   + L +   + + +
Sbjct: 96  ALEKAKTNLANSVRQTHQHMINSRQYQANISLRRSELNKLQQDLQRREILGQSKVIGKEE 155

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      V  +   L   + +          +  +  L+    + + + +L     TF  
Sbjct: 156 LQHAREAVTSAKAALDIAVEQFNAN----QAIVLDTPLDKQPAVLQAAIELRNAWLTF-- 209

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       E+  I++P+ G +   +S         + PLM +VP     +I A   
Sbjct: 210 ------------ERTQIVTPVDGYVSR-RSVQVGARITPATPLMAVVPTDN-MWIDANFK 255

Query: 336 PKQIQHVKKGYTATVRFPHYADIR--EKKFKAI-IEKIDPIISQQDNNLQTQ-----EYY 387
             Q+  ++ G  A +    Y      + + + + +            N         +  
Sbjct: 256 ETQLADIRIGQPAKITTDFYGKNIVYQGRVEGLDMGTGSAFSLLPAQNASGNWIKIVQRL 315

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            V + I         + +  G  +EV     N 
Sbjct: 316 PVRITIDAEQLKKYPLRI--GLSSEVTVDTSNK 346



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 61/159 (38%), Gaps = 7/159 (4%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH--- 109
             N ++I S   G +    VEN   +  GT L+  +  +    ++  K ++ N       
Sbjct: 54  SGNQIQIMSQVPGSVITVNVENTDFVKSGTVLVKLDAKDAILALEKAKTNLANSVRQTHQ 113

Query: 110 --IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             I++ +   +    + ++ +   + +  ++L           +     ++S   +L + 
Sbjct: 114 HMINSRQYQANISLRRSELNKLQQDLQRREILGQSKVIGKEELQHAREAVTSAKAALDIA 173

Query: 168 LTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
           + +  +     LD  L+ + ++L+A +      LT  + 
Sbjct: 174 VEQFNANQAIVLDTPLDKQPAVLQAAIELRNAWLTFERT 212


>gi|187935322|ref|YP_001884569.1| efflux transporter RND family, MFP subunit [Clostridium botulinum B
           str. Eklund 17B]
 gi|187723475|gb|ACD24696.1| efflux transporter, RND family, MFP subunit [Clostridium botulinum
           B str. Eklund 17B]
          Length = 408

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 105/349 (30%), Gaps = 92/349 (26%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+K  V  G ++ +G  LLT                                    K 
Sbjct: 68  GTIEKTYVSLGQEVKKGDVLLTL-----------------------------------KG 92

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D +  +    +  L      Y++T S                      SI      LEN 
Sbjct: 93  DDINNSISQSKAALDLAQANYNNTTS---------------------GSIENQTNQLENS 131

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             L +      +++  M   L++ +A+S++   + E  + ++  +L  +I +        
Sbjct: 132 VKLAQLQYDEAKRNYDMYTALYQADAISEDQYKKIELSLNQAKQQL--DIAQ-------- 181

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                              + LEQ + +         +     ++ T++SP+ G I    
Sbjct: 182 KSYTTTTEKNIPELQALAEKQLEQAKVS-------YDVAASNLDKLTLVSPVDGVITAKN 234

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             S +    Q QP   I+       +   V    I     G          A I  +   
Sbjct: 235 CDS-NEMISQQQP-AFIISSPNTLEVNINVAQADINKFSSGQDVE------AVIDGQTIN 286

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             +E +  I+  Q         Y+V + I      +++  L+ G  AEV
Sbjct: 287 GKVEYVPLIVDPQT------SLYQVKILID-----NSSNTLKAGMSAEV 324


>gi|28870858|ref|NP_793477.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28854107|gb|AAO57172.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 387

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/423 (11%), Positives = 121/423 (28%), Gaps = 94/423 (22%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI----TWSI---LLPIEISVSSSGEILNEDNVVEIKSP 62
            R+    +    +   + + G++     W       PIE + ++      +     I   
Sbjct: 31  PRSTRKRVVSSVIFGAVALAGVLLVLYAWQFPPFASPIESTENAQ----VKGQTTLIAPQ 86

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG + +  V++   +  G  L+  +D        + +  +      +  +K++L     
Sbjct: 87  LSGYVYEVPVQDFQFVKAGDLLVRLDD-------RIYRQRLDQALAQLAVQKASLANNLQ 139

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +    E     R+ +L + + +   + +                                
Sbjct: 140 QRRSAEATIGQRQAELQNSIAQSRKSAA-------------------------------- 167

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                          DL   + L    +VS+++L+       ++   + E          
Sbjct: 168 ---------------DLRRNQALVTDGSVSKSELDVTRAADAQANAAVAEAKAVLLIARE 212

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +  +           +   S +        A E++++       +   I++P  G +  
Sbjct: 213 DLQTVI----------VNRGSLEASVANAQAAIELARI-----DLDNTRIVAPRDGQLGQ 257

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP  +     A +   Q+ +V+ G   +            +
Sbjct: 258 IGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKETQMANVRLGQPVSFTVDALDGR---E 311

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVL 414
               +++I P    +      +  T  + ++  +I      D +      LR G    V 
Sbjct: 312 MHGHVQRISPSAGSEFSLLPADNATGNFVKISQRIPVRIVVDADQPMLEHLRPGMSVVVS 371

Query: 415 FTA 417
              
Sbjct: 372 IDT 374


>gi|222111385|ref|YP_002553649.1| RND family efflux transporter MFP subunit [Acidovorax ebreus TPSY]
 gi|221730829|gb|ACM33649.1| efflux transporter, RND family, MFP subunit [Acidovorax ebreus
           TPSY]
          Length = 531

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 102/306 (33%), Gaps = 25/306 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++       K++ +E   +  +EQL     +            +  +     +KL + RS
Sbjct: 174 QAGAQTYEFKFEQVEGRVQITDEQLQRNGVELGDAGPARIRSSLQLLGE---VKLNQDRS 230

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +++    L      +RA      +   ++  +  +    Q    + E +  +  L L   
Sbjct: 231 VFVTPR-LAGIVESVRANAGDPVRRGQVLAVISSQALADQ----RSELLAAQKRLNLART 285

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            +E++  L       ++  L      +E     E+ ++  A   +  T   +   +  + 
Sbjct: 286 TYEREKKLWEDKISAEQDYLTARQLYQEAEIATERARQKLASLGAGATESTQGLTRYEVR 345

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +PI G I   +  S     ++   + ++       ++   V  K +  +K G  A V+  
Sbjct: 346 APIDGVITDKKI-SVGEVLKEDGTIFQLA-DLSTVWVELIVPAKDVGRIKVGDQARVQSA 403

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                 E +  A +  +  +I +Q  N               L   +   + R G P  V
Sbjct: 404 AL----EGEASAKVSYVGALIGEQSRNA-----------TARLVLGNAKGQWRPGLPVSV 448

Query: 414 LFTAKN 419
             T+  
Sbjct: 449 DLTSDE 454


>gi|323167140|gb|EFZ52858.1| multidrug resistance protein A [Shigella sonnei 53G]
          Length = 319

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 27  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 86

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 87  EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 140

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 141 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 186

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 187 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 244

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 245 VQRLPVRIELDQKQLEQYPLRI 266



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 14/136 (10%), Positives = 46/136 (33%), Gaps = 7/136 (5%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKA 130
             + +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +  
Sbjct: 10  DFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQ 69

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLL 188
            +      L           +     ++S    L + + +  +     L   LE++ ++ 
Sbjct: 70  SDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQ 129

Query: 189 RALLSSHQKDLTMMKN 204
           +A        L + + 
Sbjct: 130 QAATEVRNAWLALERT 145


>gi|295096497|emb|CBK85587.1| Multidrug resistance efflux pump [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 364

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/319 (10%), Positives = 91/319 (28%), Gaps = 71/319 (22%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + +VV I    +G + + +V +  ++ +G  L+  +  +TT   D  +  +      +  
Sbjct: 60  DGDVVTIAPKTAGYVTELRVRDNQRVKKGDVLVVIDPRDTTAQRDQAQAQLGLAVAQLHQ 119

Query: 113 EKSALDFLNNKYDVLEKAFESRE-EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            ++ L     +Y       +++  +   D          +      ++  +S+     ++
Sbjct: 120 AQAQLALSKVQYPAQRDEAKAQVLKAQADMANAQAEYRRQRGVDPRATTQQSIDAANAQL 179

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           RS        + +  +   +                                    L++R
Sbjct: 180 RSAQAGLASAQAQLEVAEQV-----------------------------------QLQIR 204

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +     +   R +++   +                             L           
Sbjct: 205 QQETNVEARERQVDQARAQ-----------------------------LETANLNLSYTE 235

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P  G +            Q    L  +V  S   ++ A     Q++ +K G   TV 
Sbjct: 236 VRAPFDGFVTKRNV-QPGTLVQAGTALFSLV--SPNVWVVANFKESQLERMKPGDKVTVS 292

Query: 352 FPHYADIREKKFKAIIEKI 370
              + D+   + +  I+ I
Sbjct: 293 VDAWPDM---ELEGHIDSI 308


>gi|325519604|gb|EGC98954.1| multidrug resistance protein A [Burkholderia sp. TJI49]
          Length = 383

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 88/271 (32%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +++N      + +L ++ LS  + DL     + +  AVSQ
Sbjct: 75  QVALQQAEANLAQTVRQVRGLFVNDDQYRAQVALRQSDLSKAEDDLRRRMAVAQTGAVSQ 134

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ +R      D A  + A+     +     +    
Sbjct: 135 EE------------------ISHARDAVRAAQASVDAAQQQLASNRALTANTTIASHPNV 176

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM +VP +   ++ A 
Sbjct: 177 LAAAAKVRDAYLANARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMSVVPLN-AVWVDAN 234

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 235 FKEVQLKHMRIGQPVELTADIYGSSVVYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 294

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V +++       + + +      +V   
Sbjct: 295 RLPVRIELDPKDLDKHPLRIGLSMQVDVNIK 325



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 45/134 (33%), Gaps = 2/134 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +   + ++   +  G PL+  +  ++   +   + ++      + 
Sbjct: 34  VNGNVVQITPQVTGTVIAVKADDTQTVKAGDPLVVLDPADSQVALQQAEANLAQTVRQVR 93

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 D    +  + +      E+ L     + +  +   +  ++   +V  +      
Sbjct: 94  GLFVNDDQYRAQVALRQSDLSKAEDDLRRRMAVAQTGAVSQEEISHARDAVRAAQASVDA 153

Query: 170 RMRSIYLNRLDLEN 183
             + +  NR    N
Sbjct: 154 AQQQLASNRALTAN 167


>gi|270157853|ref|ZP_06186510.1| putative multidrug resistance efflux protein [Legionella
           longbeachae D-4968]
 gi|289163883|ref|YP_003454021.1| multidrug efflux system [Legionella longbeachae NSW150]
 gi|269989878|gb|EEZ96132.1| putative multidrug resistance efflux protein [Legionella
           longbeachae D-4968]
 gi|288857056|emb|CBJ10871.1| multidrug efflux system [Legionella longbeachae NSW150]
          Length = 400

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 88/289 (30%), Gaps = 27/289 (9%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E QL+          S  +   +      L   + ++R  + N      K  L +A L  
Sbjct: 81  ETQLVTEGQTIIKLDSADYKVALQKAKADLAQSVRQVRQYFENAAQARQKVILDKANLIQ 140

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q DL   + L    AVS+ ++       YK+ LE  E  ++             E    
Sbjct: 141 AQLDLKRRQGLIGNRAVSREEM-----QHYKTALEAAEATYDLSLHQLDAALALVENAQL 195

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
           + + L E ++             + L       ++ TI +PI G +   +S         
Sbjct: 196 YTHPLVETAK-------------ANLKKAYLDLQRTTIKAPITGYVAK-RSVQPGQQVSM 241

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE-KKFKAII-EKIDP 372
           +  ++ I+P +   +I A      +  ++ G   T+    Y  I    K   +       
Sbjct: 242 NSVMLAIIPLNDT-WIDANYKESDLNDIRIGQPVTIYADAYPGITYHGKVVGLNAGTGSA 300

Query: 373 IISQQDNNLQTQ-----EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                  N         +   V + +       N ++L       +   
Sbjct: 301 FALLPPQNATGNWIKIVQRLPVRINLDPDELKKNPLQLGLSMRVTINIH 349



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/185 (8%), Positives = 59/185 (31%), Gaps = 16/185 (8%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPI----EISVSSSGEILNEDNVVEIKSP 62
           + L +   A L    +   I  + L  W I        + +           N+V++   
Sbjct: 17  ETLHKRKVAMLILGGVFLFIAFLWLTYWLIWGQFELYTDDAYI-------NGNMVQLMPQ 69

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID-----TEKSAL 117
            +G + +   +    + +G  ++  +  +    +   K  +      +        ++  
Sbjct: 70  VAGTVVEINTDETQLVTEGQTIIKLDSADYKVALQKAKADLAQSVRQVRQYFENAAQARQ 129

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             + +K ++++   + +  Q L           + +   + +   +  + L ++ +    
Sbjct: 130 KVILDKANLIQAQLDLKRRQGLIGNRAVSREEMQHYKTALEAAEATYDLSLHQLDAALAL 189

Query: 178 RLDLE 182
             + +
Sbjct: 190 VENAQ 194


>gi|78188955|ref|YP_379293.1| secretion protein HlyD [Chlorobium chlorochromatii CaD3]
 gi|78171154|gb|ABB28250.1| Secretion protein HlyD [Chlorobium chlorochromatii CaD3]
          Length = 419

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 76/222 (34%), Gaps = 21/222 (9%)

Query: 210 AVSQNDLNQQERIVY-KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            V+Q   +Q +       + E      + ++  R  N LY E  +   +YL   +     
Sbjct: 101 YVNQVQQSQAQLNAALSQSAEANARKLKAEDDFRKANLLYKEKLISQTDYLASKTNAEAA 160

Query: 269 NQR------TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPL 318
                        + S L        + T+ +PI GTI+   S +              +
Sbjct: 161 TAAYKASLFAVDQQKSLLVQNRDRMNKTTVRAPINGTIIALNSKAGERVVGTGQFPGTEV 220

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-PIISQQ 377
           +++  +     +  +V    I  V +G   T+    + D +   F  ++ +I    I++ 
Sbjct: 221 LRLA-NLDSMQVEVEVNENDIVKVTQGNPVTITVDAFGDRK---FSGVVREISNSAIAKA 276

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               +    + V ++I      ++N  L+ G  A     A+ 
Sbjct: 277 AGTQEEVTNFAVKIRI-----LNHNRLLKPGMSATADIEAER 313



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 74/197 (37%), Gaps = 25/197 (12%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITW--SILLPIEISV------------SSSGEI 50
           M K     +  +L  +    +IG   LI W  S   PIEI+             +++G I
Sbjct: 1   MSKKKNSINRKTLWLLLAALVIGSGSLIFWLRSREKPIEITTEKAFEKEVVHLITATGTI 60

Query: 51  LNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
             E  +V   SP  SG I +  +++G ++ QG  L   +        D+    ++  +  
Sbjct: 61  QPE--LVVAMSPDVSGEIIELPIKDGEEVKQGALLFKIQP-------DIYVNQVQQSQAQ 111

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLD-FLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           ++   S     N +    E  F        +  + +     SK      ++ Y++    +
Sbjct: 112 LNAALSQSAEANARKLKAEDDFRKANLLYKEKLISQTDYLASKTNAEAATAAYKASLFAV 171

Query: 169 TRMRSIYLNRLDLENKS 185
            + +S+ +   D  NK+
Sbjct: 172 DQQKSLLVQNRDRMNKT 188


>gi|167749052|ref|ZP_02421179.1| hypothetical protein ANACAC_03833 [Anaerostipes caccae DSM 14662]
 gi|167651674|gb|EDR95803.1| hypothetical protein ANACAC_03833 [Anaerostipes caccae DSM 14662]
          Length = 575

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 57/433 (13%), Positives = 143/433 (33%), Gaps = 38/433 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITW---------------SILLPIEISVSSSGEILN 52
            +K++   +   + L  + G+                     +    I+ +V  SG +  
Sbjct: 56  KMKKHKKLTAALLVLFVLAGVFAGRLALTRKAKGGNQIQTQKATKGTIKKTVEGSGSV-A 114

Query: 53  EDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                 I S  S + ++  + ++GS + +G  +         D I   +  I +L   + 
Sbjct: 115 SAATQTI-SFSSDVSVQSIKKKDGSSVKKGDTIAVLTSSSLEDSISSLENQISSLESTLS 173

Query: 112 --TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR-SLKMKL 168
              E ++    +     +++ +      +   +    +      +  +   ++ S  +K 
Sbjct: 174 QGAESASSTISSKVSGRVKRIYAKDGTAVAKTMDSKGALMEISADGKLKIEFKPSQTVKT 233

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV--SQNDLNQQERIVYKS 226
               ++      +  K S + +  ++     +   ++  K +V  S N      ++   S
Sbjct: 234 GDSVTVKFGEYSVSGKISGVSSGKATAVISDSYYYDVDTKASVYNSSNKKLGSGKLKSNS 293

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            + +  +     ++    N+                S+  E N       + +L  L+K 
Sbjct: 294 PITVTGDKGTVSSIEVSKNQKVYSGTTLITLSGAGYSKTYESNLAKHEALVDQLEELKKE 353

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           ++  T+ +   G +    + S+     + +   K+V  +    +   V    I+ +K G 
Sbjct: 354 KKNLTVTAKYDGVVDELSA-SAGTTVSKGKTFCKVV-STTAYKVNIDVDELDIKEIKTGQ 411

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           + +V      D   K FK  + K+  I +  D        Y V ++++D        +L 
Sbjct: 412 SVSVTADAIED---KTFKGTVTKVSKIGTNTDGVAT----YPVTIELSDAE------DLY 458

Query: 407 NGFPAEVLFTAKN 419
               A    T + 
Sbjct: 459 PAMSATATITTQE 471


>gi|15803204|ref|NP_289236.1| multidrug resistance secretion protein [Escherichia coli O157:H7
           EDL933]
 gi|15832801|ref|NP_311574.1| multidrug resistance secretion protein [Escherichia coli O157:H7
           str. Sakai]
 gi|168762480|ref|ZP_02787487.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4501]
 gi|168768776|ref|ZP_02793783.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4486]
 gi|168787940|ref|ZP_02812947.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC869]
 gi|195938438|ref|ZP_03083820.1| multidrug resistance secretion protein [Escherichia coli O157:H7
           str. EC4024]
 gi|254794631|ref|YP_003079468.1| multidrug efflux system [Escherichia coli O157:H7 str. TW14359]
 gi|261225981|ref|ZP_05940262.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261256761|ref|ZP_05949294.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           FRIK966]
 gi|12517126|gb|AAG57794.1|AE005497_5 multidrug resistance secretion protein [Escherichia coli O157:H7
           str. EDL933]
 gi|13363018|dbj|BAB36970.1| multidrug resistance secretion protein [Escherichia coli O157:H7
           str. Sakai]
 gi|189362023|gb|EDU80442.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4486]
 gi|189367233|gb|EDU85649.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC4501]
 gi|189372161|gb|EDU90577.1| multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC869]
 gi|209762158|gb|ACI79391.1| multidrug resistance secretion protein [Escherichia coli]
 gi|209762160|gb|ACI79392.1| multidrug resistance secretion protein [Escherichia coli]
 gi|209762162|gb|ACI79393.1| multidrug resistance secretion protein [Escherichia coli]
 gi|209762166|gb|ACI79395.1| multidrug resistance secretion protein [Escherichia coli]
 gi|254594031|gb|ACT73392.1| multidrug efflux system [Escherichia coli O157:H7 str. TW14359]
 gi|320189017|gb|EFW63676.1| Multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC1212]
 gi|320640673|gb|EFX10209.1| multidrug efflux system protein EmrA [Escherichia coli O157:H7 str.
           G5101]
 gi|320646038|gb|EFX15015.1| multidrug efflux system protein EmrA [Escherichia coli O157:H- str.
           493-89]
 gi|320651338|gb|EFX19769.1| multidrug efflux system protein EmrA [Escherichia coli O157:H- str.
           H 2687]
 gi|320656729|gb|EFX24617.1| multidrug efflux system protein EmrA [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662272|gb|EFX29669.1| multidrug efflux system protein EmrA [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320667323|gb|EFX34281.1| multidrug efflux system protein EmrA [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 390

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 79/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +     +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQQMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337


>gi|120434570|ref|YP_860263.1| HlyD family secretion protein [Gramella forsetii KT0803]
 gi|117576720|emb|CAL65189.1| HlyD family secretion protein [Gramella forsetii KT0803]
          Length = 426

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 75/264 (28%), Gaps = 52/264 (19%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
            + ++    +  + +   S  +A L   + D    K LFEK  +S+ + +        + 
Sbjct: 100 QSSVQRAQASYQNSKANYSQTQANLRQAEADYQRNKTLFEKGVISKAEWDGIVSNYEMAE 159

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                + +  ++    + E                                     +   
Sbjct: 160 ANKESSYYSMQSSAATVTE------------------------------------AQDNL 183

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            +  I +P++GTI    +                +++ V +     +   V    I  V 
Sbjct: 184 GRTNIYAPMSGTISKLDAELGERVVGTQQMAGTEILR-VANLDNMEVEVDVNENDIVKVS 242

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD-------L 396
              +  V    Y     K+FK ++ +I      +    Q   + +V ++I          
Sbjct: 243 VNDSTLVEVDAY---LGKEFKGVVTEISNTADNELTTDQVTNF-KVKVRILKESYVDLME 298

Query: 397 AFSDNNIELRNGFPAEVLFTAKNT 420
             S+N    R G  A V       
Sbjct: 299 GKSENYSPFRPGMTATVDIITNKR 322



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 67/195 (34%), Gaps = 4/195 (2%)

Query: 39  PIE--ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           PI+   +VS++G+I  E  V  + S  SG I +  +  G  + +G  L+          +
Sbjct: 45  PIDITETVSATGKIQPEIEVK-LSSEVSGEIIELPIVEGQAVKKGDLLVRVNPDIYQSSV 103

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              + S +N + +    ++ L      Y   +  FE       ++ G   +      N  
Sbjct: 104 QRAQASYQNSKANYSQTQANLRQAEADYQRNKTLFEKGVISKAEWDGIVSNYEMAEANKE 163

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            S                 L R ++    S  +  L +   + +   + +     +   +
Sbjct: 164 SSYYSMQSSAATVTEAQDNLGRTNIYAPMSGTISKLDAELGERVVGTQQMAGTEILRVAN 223

Query: 216 LNQQERIVYKSTLEL 230
           L+  E  V  +  ++
Sbjct: 224 LDNMEVEVDVNENDI 238


>gi|83645035|ref|YP_433470.1| membrane-fusion protein [Hahella chejuensis KCTC 2396]
 gi|83633078|gb|ABC29045.1| Membrane-fusion protein [Hahella chejuensis KCTC 2396]
          Length = 372

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 67/196 (34%), Gaps = 20/196 (10%)

Query: 227 TLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            L+   ++ E K M     + E   + + +        S D E ++    +  +++    
Sbjct: 100 QLDTDVDVAEIKGMQASAELAEATYKRDQKLLERNVASSLDFETSRAQLKNAQAQVESQR 159

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVK 343
               +K+I +P  GT +  +  +   Y Q   P++ +        Y+   +  +    V+
Sbjct: 160 ARINKKSIRAPFKGT-LGIRKVNLGEYVQPGTPIVTL--QDLSRVYVNFALPEQLFSQVR 216

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G     +   + +     F   +  ID  + QQ  N   Q             F + + 
Sbjct: 217 NGQQVEAKVAAFPERT---FNGKVTAIDARVDQQTRNFTIQ-----------ATFENPDQ 262

Query: 404 ELRNGFPAEVLFTAKN 419
            LR G  AEV     +
Sbjct: 263 ALRPGMFAEVKLLLGS 278



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 45/115 (39%), Gaps = 5/115 (4%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G ++    V  + S  +G+IK   + +G+++  G  L+  +       I   + S +   
Sbjct: 63  GNVIAVQQV-TVTSEEAGVIKSMPISSGAKVEAGDLLVQLDTDVDVAEIKGMQASAELAE 121

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
                ++  L+    +       FE+   QL +   +  S  +++    I + ++
Sbjct: 122 ATYKRDQKLLE----RNVASSLDFETSRAQLKNAQAQVESQRARINKKSIRAPFK 172


>gi|319940842|ref|ZP_08015181.1| efflux transporter [Sutterella wadsworthensis 3_1_45B]
 gi|319805724|gb|EFW02505.1| efflux transporter [Sutterella wadsworthensis 3_1_45B]
          Length = 433

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 50/151 (33%), Gaps = 14/151 (9%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTY 329
           T AD  + L   E  R +  I SPI G ++          A   Q   L+ +    +   
Sbjct: 191 TIADAQAALETAETDRSKANIKSPIDGVVLARSVEPGYAVAASLQAVELLSLATDLRELE 250

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           ++  V    I  ++ G  A      Y D R     A + K+    +  +N +    Y   
Sbjct: 251 LKVNVDEADIGSIQSGQKAYFTVSAYPDKRFP---ATLTKVAYGATTTENVVTYTTY--- 304

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                 L   + ++ LR G  A    T    
Sbjct: 305 ------LNVDNADLLLRPGMTASATVTTAER 329



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 4/208 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    ++++VS+ G +      V + S  SGI++K  V+   +I     L+  +      
Sbjct: 63  AKTGNLDVTVSADGTLNPI-RTVTLGSELSGIVRKVNVDVNDEIKTDQVLIELDTRNLDS 121

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   + S+ +    +   K+ L     K   L++  +    ++           +    
Sbjct: 122 KVASARASLASAEAKLAESKATLKEAQVKDKRLKELNKLSGGKMPSRTDLDAQEAAVATA 181

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA--LLSSHQKDLTMMKNLFEKNAVS 212
                V ++                   N  S +    L  S +    +  +L     +S
Sbjct: 182 KAAVEVAKATIADAQAALETAETDRSKANIKSPIDGVVLARSVEPGYAVAASLQAVELLS 241

Query: 213 Q-NDLNQQERIVYKSTLELRENIHEQKN 239
              DL + E  V     ++      QK 
Sbjct: 242 LATDLRELELKVNVDEADIGSIQSGQKA 269


>gi|260174415|ref|ZP_05760827.1| hypothetical protein BacD2_21342 [Bacteroides sp. D2]
 gi|315922683|ref|ZP_07918923.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696558|gb|EFS33393.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 309

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 91/256 (35%), Gaps = 39/256 (15%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         M+S+   R DL  + +  +  +++ +++   ++NL    A +Q  L+ 
Sbjct: 80  QLYLKKLQLEASMKSVESQRPDLAKQIAATKQQIATAEREKKRVENLLAAGAANQKQLDD 139

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  V     +L       +N    + E  +   ++ A                      
Sbjct: 140 WDAQVKLLERQLVAQESSLQNSTNSLIEQGNSVAIQVAQM-------------------- 179

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                E    +  + SPI GT++  +   +   A   +PL K V      Y+RA +T +Q
Sbjct: 180 -----EDQLAKCHVQSPIEGTVLA-KYAEAGELAAIGKPLFK-VAEVDRMYLRAYITSEQ 232

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV +  Y +  +K +  ++  I              N +    Y V + +
Sbjct: 233 LSQVKLGDEVTV-YADYGNSEQKAYPGVVTWISDRSEFTPKTILTKNERANLVYAVKIAV 291

Query: 394 TDLAFSDNNIELRNGF 409
                  N+  L+ G 
Sbjct: 292 ------KNDGALKIGM 301


>gi|237706693|ref|ZP_04537174.1| multidrug resistance protein A [Escherichia sp. 3_2_53FAA]
 gi|226899733|gb|EEH85992.1| multidrug resistance protein A [Escherichia sp. 3_2_53FAA]
          Length = 394

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 68/218 (31%), Gaps = 22/218 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 102 RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 161

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 162 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 215

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 216 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 261

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               QI +++ G   T+    Y D    K+   +  +D
Sbjct: 262 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLD 297



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 36  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 88

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 89  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 148

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 149 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 208

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 209 EVRNAWLALERT 220


>gi|193062291|ref|ZP_03043386.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli E22]
 gi|194428632|ref|ZP_03061170.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli B171]
 gi|260845015|ref|YP_003222793.1| EmrKY-TolC multidrug resistance efflux pump protein K, membrane
           fusion protein component [Escherichia coli O103:H2 str.
           12009]
 gi|192931957|gb|EDV84556.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli E22]
 gi|194413355|gb|EDX29639.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli B171]
 gi|257760162|dbj|BAI31659.1| EmrKY-TolC multidrug resistance efflux pump protein K, membrane
           fusion protein component [Escherichia coli O103:H2 str.
           12009]
          Length = 387

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 82/269 (30%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K        L     L     + E +   ++       
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKAN----KALVMNTPLNRQPQVVEAADATKETWLAL-- 206

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 207 ------------KRTDIRSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 83/232 (35%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +          ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKETWLALKRTDIRSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|191165488|ref|ZP_03027329.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli B7A]
 gi|190904411|gb|EDV64119.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli B7A]
          Length = 387

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     I                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALIMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 85/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD- 180
            +    +   +      L   G       +     + S   +L   +   ++     ++ 
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALIMNT 184

Query: 181 -LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|325277828|ref|ZP_08143381.1| secretion protein HlyD family protein [Pseudomonas sp. TJI-51]
 gi|84994052|gb|ABC68378.1| putative HlyD family secretion protein [Pseudomonas putida]
 gi|324097039|gb|EGB95332.1| secretion protein HlyD family protein [Pseudomonas sp. TJI-51]
          Length = 377

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 104/346 (30%), Gaps = 32/346 (9%)

Query: 83  PLLTFEDIETTDLIDLKKVSIKNL-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            LL              + +   L R  +      L        V +  F    + L+  
Sbjct: 51  VLLVLYAWRLPPFSSAIESTENALVRGQVTLIGPQLSGYIVDVPVHDFQFVKAGDLLVQL 110

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             + +          +     +L   L + +S        +      +A  +  + DL  
Sbjct: 111 DDRIYKQRLAQALAQLQQQQAALANNLQQRKSAEATIAQRQAAIGDAQAQAAKAKADLRR 170

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L    +VS+++L                ++          +    +A LE A   +E
Sbjct: 171 NQALVSDGSVSRSEL----------------DVTRANEAAAVASLAQAKAALEIARQDRE 214

Query: 262 -ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
            +  +    +    +  + + +     +   + +P  G +    +     Y      LM 
Sbjct: 215 TVVVNRAALEAAVENAKAAVELARIDLDNTRVTAPRDGQLGQIGTR-LGAYVNSGAQLMA 273

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ--- 377
           +VP     ++ A +   Q+ +V+ G   +        ++       +++I P    +   
Sbjct: 274 LVP--DTLWVIANMKETQMANVRIGQPVSFTVDALNHLK---LYGHVQQISPATGSEFAL 328

Query: 378 -DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAK 418
              +  T  + ++     ++IT  A      +LR G    V    +
Sbjct: 329 LQADNATGNFVKIAQRIPVRITVDADQPPARQLRPGMSVVVSIDTR 374



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 66/217 (30%), Gaps = 27/217 (12%)

Query: 14  PASLKRMTLLSIIGIIG-------LITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           P   +R+ LLS I           L+ ++  L P   ++ S+   L    V  I    SG
Sbjct: 29  PVRTRRVRLLSSICFAAVALAGVLLVLYAWRLPPFSSAIESTENALVRGQVTLIGPQLSG 88

Query: 66  IIKKFQVENGSQILQGTPLLTFED--------------IETTDLIDLKKVSIKNLRCHID 111
            I    V +   +  G  L+  +D               +    +       K+    I 
Sbjct: 89  YIVDVPVHDFQFVKAGDLLVQLDDRIYKQRLAQALAQLQQQQAALANNLQQRKSAEATIA 148

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY-----RSLKM 166
             ++A+     +    +      +  + D             N   +         +L++
Sbjct: 149 QRQAAIGDAQAQAAKAKADLRRNQALVSDGSVSRSELDVTRANEAAAVASLAQAKAALEI 208

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                 ++ +NR  LE      +A +   + DL   +
Sbjct: 209 ARQDRETVVVNRAALEAAVENAKAAVELARIDLDNTR 245


>gi|218554910|ref|YP_002387823.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli IAI1]
 gi|260856477|ref|YP_003230368.1| EmrKY-TolC multidrug resistance efflux pump protein K, membrane
           fusion protein component [Escherichia coli O26:H11 str.
           11368]
 gi|260869073|ref|YP_003235475.1| EmrKY-TolC multidrug resistance efflux pump protein K, membrane
           fusion protein component [Escherichia coli O111:H- str.
           11128]
 gi|218361678|emb|CAQ99275.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli IAI1]
 gi|257755126|dbj|BAI26628.1| EmrKY-TolC multidrug resistance efflux pump protein K, membrane
           fusion protein component [Escherichia coli O26:H11 str.
           11368]
 gi|257765429|dbj|BAI36924.1| EmrKY-TolC multidrug resistance efflux pump protein K, membrane
           fusion protein component [Escherichia coli O111:H- str.
           11128]
 gi|323177506|gb|EFZ63094.1| multidrug resistance protein K [Escherichia coli 1180]
          Length = 387

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIRSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339


>gi|331643372|ref|ZP_08344503.1| multidrug resistance protein A [Escherichia coli H736]
 gi|331036843|gb|EGI09067.1| multidrug resistance protein A [Escherichia coli H736]
          Length = 394

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 102 RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 161

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 162 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRYAWL------ 215

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 216 ------------ALERTRIISPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 261

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 262 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 319

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 320 VQRLPVRIELDQKQLEQYPLRI 341



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 36  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 88

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 89  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 148

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 149 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 208

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 209 EVRYAWLALERT 220


>gi|237719432|ref|ZP_04549913.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229451292|gb|EEO57083.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 301

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 91/256 (35%), Gaps = 39/256 (15%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         M+S+   R DL  + +  +  +++ +++   ++NL    A +Q  L+ 
Sbjct: 72  QLYLKKLQLEASMKSVESQRPDLAKQIAATKQQIATAEREKKRVENLLAAGAANQKQLDD 131

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  V     +L       +N    + E  +   ++ A                      
Sbjct: 132 WDAQVKLLERQLVAQESSLQNSTNSLIEQGNSVAIQVAQM-------------------- 171

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                E    +  + SPI GT++  +   +   A   +PL K V      Y+RA +T +Q
Sbjct: 172 -----EDQLAKCHVQSPIEGTVLA-KYAEAGELAAIGKPLFK-VAEVDRMYLRAYITSEQ 224

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV +  Y +  +K +  ++  I              N +    Y V + +
Sbjct: 225 LSQVKLGDEVTV-YADYGNSEQKAYPGVVTWISDRSEFTPKTILTKNERANLVYAVKIAV 283

Query: 394 TDLAFSDNNIELRNGF 409
                  N+  L+ G 
Sbjct: 284 ------KNDGALKIGM 293


>gi|189220164|ref|YP_001940804.1| membrane fusion component of tripartite multidrug resistance system
           [Methylacidiphilum infernorum V4]
 gi|189187022|gb|ACD84207.1| Membrane fusion component of tripartite multidrug resistance system
           [Methylacidiphilum infernorum V4]
          Length = 452

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 60/417 (14%), Positives = 133/417 (31%), Gaps = 100/417 (23%)

Query: 3   HFMWKNLKRNHPASL----KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE 58
             +W++ KR+  +      +   +  +I  +  + W           ++ +     NV+ 
Sbjct: 35  QVLWRSWKRDLFSFAFNKYRPFLVFFLILCLVALWWFFFT---GRWVATNDAYVTGNVIP 91

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +K+  SG + +  VE+   + +                         L   +D+ K  + 
Sbjct: 92  VKAQTSGRVVEVLVESTQFVQKNQ-----------------------LLVRLDSLKQQVA 128

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           F                                       S   +L M + R+  ++   
Sbjct: 129 F--------------------------------------ESAQHNLAMAVRRVEDLFNKA 150

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             L +K +  +A+L   + DL +  +  +   VS  D    +  V     E+   I + +
Sbjct: 151 RSLRHKIAAQKAILGRQRYDLGLYSSGSKAGVVSVQDAVDAQWKV----AEIESTIRQLE 206

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           + LR       +  +     + + + +L+                     +  I++P+AG
Sbjct: 207 DELRSTEAWIQKTTIWDNPIVLKAAVELKDAYLAL--------------YRCQIVAPVAG 252

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            I   +S    +     + LM +VP      + A     +++ ++ G    +R   Y   
Sbjct: 253 YIAR-RSVQVGDEVSPEKLLMSVVPLDYYWVV-ANYRETELRRIRPGQPVKIRADIYG-- 308

Query: 359 REKKFKAIIEKIDP----IISQQDNNLQTQEY------YEVILKITDLAFSDNNIEL 405
           R   +  I+E I+P    + S    +  T  Y        V +K+       + + L
Sbjct: 309 RHYLYHGIVEGIEPGSGTVFSLLPPDNATGNYIHVVERVPVRIKLDPTELRKHPLRL 365


>gi|187735200|ref|YP_001877312.1| hypothetical protein Amuc_0694 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425252|gb|ACD04531.1| hypothetical protein Amuc_0694 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 394

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 60/397 (15%), Positives = 128/397 (32%), Gaps = 57/397 (14%)

Query: 45  SSSGEILNEDNVVEIK-SPFS-------GIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
            + G +L + N   I  SP         GI+ +     GS + +G  +   +     + I
Sbjct: 26  IAPGILLPKKNTKSISFSPKGTSDIFLLGIMPQ-----GSSVKKGESVAQADFRILDNSI 80

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVL----EKAFESREEQLLDFLGKYHSTCSKV 152
           +  + +IK+    +   + ALD    +  +     + A    EE   DFL K  +     
Sbjct: 81  EDYERAIKSKNLEVLKLRYALDQQKERSALALQKYQTALTRTEEDQKDFLEKRKARMLAE 140

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               ++   R +  K   +  +     D +        +L   + +L   +    + A  
Sbjct: 141 EEERVNKALRHMSYKQEELNQLTKMYKDDQVAEETEEIILKRLKNELGESE-FAVQGAKL 199

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +L +  R +++   +    + E++  L       ++A  +    L++    L + + +
Sbjct: 200 VAELAKL-RNIHRLGEDYATAVKEKQMDL-------EQARKQADFDLEQKKIALTEAEVS 251

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS-------------SSNYAQQSQPLM 319
                +K   L+  RE  +  +P  G ++Y    +                       + 
Sbjct: 252 LRRLQNKYNELKADREMASFKAPENGILLYGGYVADKWVAIPVAEKLKPGGKLGAFDKIA 311

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IVP +    ++A + P      K G T  ++          +   +I +  PI      
Sbjct: 312 TIVPPNSELIVQATL-PDSTATPKVGETVVIKIT------NMQIPGVITEASPIPGADGK 364

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                      + IT    +        G P +V   
Sbjct: 365 R---------RIIITPKVPASQIFA--PGLPVQVTIK 390


>gi|312973103|ref|ZP_07787276.1| multidrug resistance protein A [Escherichia coli 1827-70]
 gi|310333045|gb|EFQ00259.1| multidrug resistance protein A [Escherichia coli 1827-70]
 gi|323173030|gb|EFZ58661.1| multidrug resistance protein A [Escherichia coli LT-68]
 gi|323188433|gb|EFZ73719.1| multidrug resistance protein A [Escherichia coli RN587/1]
 gi|332344568|gb|AEE57902.1| multidrug resistance protein A [Escherichia coli UMNK88]
          Length = 326

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 34  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 93

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 94  EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 147

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 148 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 193

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 194 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 251

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 252 VQRLPVRIELDQKQLEQYPLRI 273



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 53/151 (35%), Gaps = 7/151 (4%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKS 115
           S  SG + K   +N   + +G  L+T +  +     +  K ++ +      +  I++++ 
Sbjct: 2   SQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQL 61

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
             +    K  + +   +      L           +     ++S    L + + +  +  
Sbjct: 62  QANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQ 121

Query: 176 LNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
              L   LE++ ++ +A        L + + 
Sbjct: 122 AMILGTKLEDQPAVQQAATEVRNAWLALERT 152


>gi|225853678|ref|YP_002735190.1| transport protein ComB [Streptococcus pneumoniae JJA]
 gi|225857912|ref|YP_002739422.1| transport protein ComB [Streptococcus pneumoniae 70585]
 gi|225721049|gb|ACO16903.1| transport protein ComB [Streptococcus pneumoniae 70585]
 gi|225723359|gb|ACO19212.1| transport protein ComB [Streptococcus pneumoniae JJA]
          Length = 449

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/439 (10%), Positives = 146/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQSEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV------SQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               + +  +    +L  +N         ++   +  +   ++  ++   I + ++ L  
Sbjct: 189 RDYQTAKSAIETGASLAGQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 244 INELY--------------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               Y               +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|209809466|ref|YP_002265004.1| hypothetical protein VSAL_II0688 [Aliivibrio salmonicida LFI1238]
 gi|208011028|emb|CAQ81442.1| putative membrane protein [Aliivibrio salmonicida LFI1238]
          Length = 348

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 72/414 (17%), Positives = 131/414 (31%), Gaps = 90/414 (21%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             M+   KR          L  I+  I ++ ++ L P  + + + G I      V + + 
Sbjct: 20  KVMYGGAKRGGYRIRWYFILAVILSPIFIMGYTFLKPY-LFIVAPGIIT--TGPVTLTAA 76

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GI+K  +VE+   +L    L+  +D                                 
Sbjct: 77  QDGIVKMIEVEDSEFVLFDQTLMQLDD--------------------------------- 103

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +LEK     +E+L+    + ++  S+     +S  + ++K     ++ I   +L+ +
Sbjct: 104 --PILEKDIFFIKEELM----QLNAFQSENTEEDLSPYFTAIKAAKYNLKKITKIKLNYD 157

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
             ++                     +  VSQ D      I   S   L          + 
Sbjct: 158 QYAN---------------------EGKVSQVDYAAIIGIYNASQTSL------TSAYIA 190

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                  +   + A  + +++R L QN  T  +++  L          T+ +P  G ++ 
Sbjct: 191 LNQAKIADKQRQLAGGVAQVTRALNQNLTTKLNQLETL----------TVKAPYMGLVID 240

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
             +           PL+ I P      I   + PK I   K G    V  P       KK
Sbjct: 241 INTL-VGQRVSIGDPLVTISPDVAPFVIS-YLDPKHIDKAKLGTEVMVTLP-----NGKK 293

Query: 363 FKAIIEK---IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            KA +     +   +  Q           + +KIT L       E   G P EV
Sbjct: 294 VKARVSFSIGLTSKVPPQLAKPFEGAKALLKVKITFLGGLLEG-EWVEGMPVEV 346


>gi|163792356|ref|ZP_02186333.1| putative efflux pump protein [alpha proteobacterium BAL199]
 gi|159182061|gb|EDP66570.1| putative efflux pump protein [alpha proteobacterium BAL199]
          Length = 384

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/422 (13%), Positives = 109/422 (25%), Gaps = 106/422 (25%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS------GIIKKF 70
           L  + L+ ++ I G  +W            +G  +  +N        +      G + + 
Sbjct: 34  LIMLVLVPLVLIAGAASWYAF---------TGRYVTSENAYVKAHIIAISTDIDGRVVEV 84

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V N  ++  G  L   +       + + +  I  +R  ID  ++    +  + D   + 
Sbjct: 85  MVRNDQRVQAGDVLFRLDPDPYWLQLQITEAKIVTVRNDIDAVRAEFHQIEAEIDEGNET 144

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               + +                                R R++         K      
Sbjct: 145 VRYYQREA------------------------------ERQRALAKTGAGTSAKLDEAEF 174

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
             +S                 ++  +        K   EL  +      +     E   E
Sbjct: 175 EFAS-----------------ARQRVRALREKTRKVLAELGGDPERAAELHPKYLEALAE 217

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            NL                              E       + +P  G            
Sbjct: 218 RNL-----------------------------AELHLGYTEVRAPTGGIATQVHL-EPGE 247

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           + ++ +P   ++       + A +   ++ HV++G    V    Y D+    + A +  I
Sbjct: 248 WLEEGKPAFGLIEVDDTWVV-ANLKETELTHVREGQLVEVSVDAYPDVT---WSARVTSI 303

Query: 371 DPIISQQDNNLQTQE--------YYEVILKITDLAFSDNNIELRNGFPAEVLFTAK-NTT 421
            P    +   L  Q            V ++I DL   D    LR G  A +    K    
Sbjct: 304 APATGAEFAVLPPQNASGNWVKVVQRVPVRI-DLEKVDGRPPLRAGMTASIAIDTKRERR 362

Query: 422 LA 423
           L 
Sbjct: 363 LL 364


>gi|160885722|ref|ZP_02066725.1| hypothetical protein BACOVA_03726 [Bacteroides ovatus ATCC 8483]
 gi|156108535|gb|EDO10280.1| hypothetical protein BACOVA_03726 [Bacteroides ovatus ATCC 8483]
          Length = 309

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 91/256 (35%), Gaps = 39/256 (15%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         M+S+   R DL  + +  +  +++ +++   ++NL    A +Q  L+ 
Sbjct: 80  QLYLKKLQLEASMKSVESQRPDLAKQIAATKQQIATAEREKKRVENLLAAGAANQKQLDD 139

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  V     +L       +N    + E  +   ++ A                      
Sbjct: 140 WDAQVKLLERQLVAQESSLQNSTNSLIEQGNSVAIQVAQM-------------------- 179

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                E    +  + SPI GT++  +   +   A   +PL K V      Y+RA +T +Q
Sbjct: 180 -----EDQLAKCHVQSPIEGTVLA-KYAEAGELAAIGKPLFK-VAEVDRMYLRAYITSEQ 232

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV +  Y +  +K +  ++  I              N +    Y V + +
Sbjct: 233 LSQVKLGDEVTV-YADYGNSEQKAYPGVVTWISDRSEFTPKTILTKNERANLVYAVKIAV 291

Query: 394 TDLAFSDNNIELRNGF 409
                  N+  L+ G 
Sbjct: 292 ------KNDGALKIGM 301


>gi|327192930|gb|EGE59849.1| hypothetical protein RHECNPAF_1830023 [Rhizobium etli CNPAF512]
          Length = 410

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/353 (14%), Positives = 114/353 (32%), Gaps = 29/353 (8%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET-TDLIDLKKVSIKNLRCHIDTEKSA 116
            + +P  G I +  V+ GS +  G  L    +      ++   +         +   K  
Sbjct: 44  VVNAPIDGTIAEEPVKVGSPVNAGQSLAEIRNTRVNRAILASLEADRNTALDRVAALKKE 103

Query: 117 LDFLNNKYDVLEKAFES-REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            D L+   + L    E  R+  + +   +      KV       +   +           
Sbjct: 104 RDELSALREELSARLEVYRQTTIANLEREVEILRKKVEVSQAQDLVAQVD---------L 154

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
             R+ LE+K  L + L+ + +          E + ++ + L Q+   V +      +  +
Sbjct: 155 DRRMALESKGILTQKLVEAARAAGAATGGEVEISNLTVDQLQQRLNAVRQGIFVFGDGQN 214

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           +     +  +E+    N +  + + E      + Q+    E S+++ LE      T  +P
Sbjct: 215 DVPYSRQREDEVVVRIN-DLNSRIAENETRAGEVQKQLVQESSRVSSLESA----TATAP 269

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G +      + SN    ++ +  +    +  ++   V       +  G  A VR    
Sbjct: 270 FDGVVWSRSIVNGSNVVLNNELIRLL--DCRELFVDILVPEVNYDEIYPGLVAQVRL--- 324

Query: 356 ADIREKKFKAIIEK-------IDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
              R   FK  +         ++           TQ    + +++     +D+
Sbjct: 325 -FGRSDVFKGTVISVRGSSALVETDSFAASLPPSTQRNARIRVRLDPSFMNDD 376


>gi|238785700|ref|ZP_04629675.1| ABC-type bacteriocin/lantibiotic exporter, contain an N-terminal
           double-glycine peptidase domain [Yersinia bercovieri
           ATCC 43970]
 gi|238713385|gb|EEQ05422.1| ABC-type bacteriocin/lantibiotic exporter, contain an N-terminal
           double-glycine peptidase domain [Yersinia bercovieri
           ATCC 43970]
          Length = 164

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 27/56 (48%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            +  +  L+++G+I ++ W+    ++ +   +G++        I+S   GI+ +  
Sbjct: 108 RMSLIVWLTLVGMIVMLVWAYFAILDEATVGTGKVTPSSRAQLIESLDGGIVNELL 163


>gi|152991873|ref|YP_001357594.1| efflux system, membrane fusion protein [Sulfurovum sp. NBC37-1]
 gi|151423734|dbj|BAF71237.1| efflux system, membrane fusion protein [Sulfurovum sp. NBC37-1]
          Length = 385

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 100/309 (32%), Gaps = 45/309 (14%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++K  V++G+ + +G  +      E        +  I   +  ++ ++  L+      
Sbjct: 57  GRVEKITVDDGTVVKKGMIVAILGSKEYEAQKTQIEAQISAQKKTLEAKQIELEI----- 111

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                            +++   LK    +++S       LE  
Sbjct: 112 -------------------------------SRTTIPAGLKKAQEQLKSTQTKLKVLEEN 140

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQN--DLNQQERIVYKSTLE-LRENIHEQKNML 241
               + +L+  +KD      L++  A+  +  +L++ +    +   + L     E K  +
Sbjct: 141 IKAQQKVLAQAKKDHERSVFLYKSKAIDSHAFELSKLKVDTEQDKYDALLLQRDELKAAI 200

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                +  EA       L  I   +E  +       +    +E    + T+ SPI G  V
Sbjct: 201 SVAQSVVKEAQASQKQILS-IESSIEALKENIKALEASKAQVESIIAELTLKSPIDGYTV 259

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +  +         P+  ++   +  Y++  V   Q   +K G  A +    Y +    
Sbjct: 260 E-KIANVGEVVGAGMPVATLI-DPRSLYLKIFVDTLQNGRIKIGDKAVIFLDAYPNR--- 314

Query: 362 KFKAIIEKI 370
             +A +  +
Sbjct: 315 PIEAKVVNV 323


>gi|304384350|ref|ZP_07366761.1| ABC superfamily ATP binding cassette transporter, lipoprotein
           [Prevotella marshii DSM 16973]
 gi|304334666|gb|EFM00948.1| ABC superfamily ATP binding cassette transporter, lipoprotein
           [Prevotella marshii DSM 16973]
          Length = 298

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 92/249 (36%), Gaps = 40/249 (16%)

Query: 167 KLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           +L   R++Y N+  DL  + + LR  LS+ + +      L    A S+  L+  +  V  
Sbjct: 78  QLGATRAVYANQRPDLSKQIATLREQLSNAEMERRRFAGLVADGAASRKQLDDADNAVRV 137

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
              +L   I    N  + +N     A+++ A  +                          
Sbjct: 138 LRRQLEAQISAIGNSTQSLNSQMTAADIQRAEVI-------------------------D 172

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             ++  + +PIAGT++         +A   +PL K+   +   ++RA +T +Q+  VK G
Sbjct: 173 QLQKCHVRAPIAGTVLE-TYAERGEFAVVGKPLFKMA-DTDRMFLRAYITSEQLSSVKIG 230

Query: 346 YTATVRFPHYADIREKKFKAIIEKID-----PIISQQDNNLQTQEYYEVILKITDLAFSD 400
               V    Y     K +  I+  I         +   ++ +    Y V + +     +D
Sbjct: 231 QRVRVT-SDYGHHAGKTYSGIVVWISDRSEFTPKTIVTDDERADLVYAVKIAV----RND 285

Query: 401 NNIELRNGF 409
             I++  G 
Sbjct: 286 GGIKI--GM 292


>gi|330807949|ref|YP_004352411.1| secretion protein, HlyD family [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376057|gb|AEA67407.1| putative secretion protein, HlyD family [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 287

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 77/221 (34%), Gaps = 28/221 (12%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN------ 269
           L   +R  +++ +E    + + +     + E   EA+   A   + IS +L +N      
Sbjct: 71  LLSIDRERFEAAVEKARAVVQTRQQQLSLRE--HEASRRAALGPQAISAELRENAQINAG 128

Query: 270 --QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +    +  ++  + E    +  +L+P  G I   +  +  NY    QP+M ++     
Sbjct: 129 IARGELREAQAEAKVAELNLARSQVLAPRNGHITNLRL-AEGNYVNAGQPVMALI-DDST 186

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
            Y++A     ++  ++ G    +             +  +E I   I+ ++ N   Q   
Sbjct: 187 FYVQAYFEETKLPRIRVGDPVKIWL----MSAGHALEGHVESISRGITDRNTNPDAQLLA 242

Query: 388 EV-----------ILKIT-DLAFSDNNIELRNGFPAEVLFT 416
           EV            + +   L      + L  G  A V   
Sbjct: 243 EVEPTFNWVRLAQRIPVRIKLDKLPEGVNLSAGMTASVQVR 283



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 57/186 (30%), Gaps = 14/186 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSI--LLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           R        + ++++    G   W    L P         +++       I    SG ++
Sbjct: 2   RTSVRVAVTLCMVAVAIFAGFHLWQYYMLTPWTRDARIRADVVV------IAPDVSGWVR 55

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKV------SIKNLRCHIDTEKSALDFLNN 122
           + +  +  Q+  G  LL+ +       ++  +          +LR H  + ++AL     
Sbjct: 56  ELKAVDNQQVKAGDVLLSIDRERFEAAVEKARAVVQTRQQQLSLREHEASRRAALGPQAI 115

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             ++ E A  +      +             N   S V       +T +R    N ++  
Sbjct: 116 SAELRENAQINAGIARGELREAQAEAKVAELNLARSQVLAPRNGHITNLRLAEGNYVNAG 175

Query: 183 NKSSLL 188
                L
Sbjct: 176 QPVMAL 181


>gi|283786763|ref|YP_003366628.1| multidrug resistance protein A [Citrobacter rodentium ICC168]
 gi|282950217|emb|CBG89853.1| multidrug resistance protein A [Citrobacter rodentium ICC168]
          Length = 390

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 86/261 (32%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+   ++ +  L+  Q DL     L   N + + 
Sbjct: 99  QAFEKAKTALASSVRQTHQLMINSKQLQANIAVQKTALAQAQSDLNRRVPLGSANLIGRE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V ++  +L   + +       I     E          E+            
Sbjct: 159 ELQHARDAVTRAQAQLDVAVQQYNANQAMILNSKLEDQPAVQQAATEVRNAWL------- 211

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         S PLM +VP +   ++ A  
Sbjct: 212 -----------ALERTKIVSPMTGYVSR-RAVQPGAQISPSTPLMAVVPATN-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G  ATV    Y D    K+   +  +D          P  +   N ++  
Sbjct: 259 KETQLANMRIGQPATVVSDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 316

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++     + + + +
Sbjct: 317 QRLPVRIELDAQQLAQHPLRI 337



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 53/164 (32%), Gaps = 3/164 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + QG  L+T +  +     +  K ++ +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVKQGDVLVTLDQTDAKQAFEKAKTALASSVRQTH 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                   L     V + A    +  L     LG  +    +   +   +V R+      
Sbjct: 117 QLMINSKQLQANIAVQKTALAQAQSDLNRRVPLGSANLIGREELQHARDAVTRAQAQLDV 176

Query: 170 RMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            ++    N+   L +K     A+  +  +       L     VS
Sbjct: 177 AVQQYNANQAMILNSKLEDQPAVQQAATEVRNAWLALERTKIVS 220


>gi|302382190|ref|YP_003818013.1| secretion protein HlyD [Brevundimonas subvibrioides ATCC 15264]
 gi|302192818|gb|ADL00390.1| secretion protein HlyD family protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 338

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 67/187 (35%), Gaps = 25/187 (13%)

Query: 18  KRMTLLSIIGIIGLITWSIL-------------LPIEI--SVSSSGEILNEDNVVEIKSP 62
               LL I+ ++G + +S                 +E   +  ++G++  E  ++ + + 
Sbjct: 11  WIGVLLIIVLVVGFLMFSKAGAAKKAEEEKAEATKVESPYAAIANGKVDVEGGIISVAAR 70

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GII++  V+ G ++  G  L   ED E    +   + ++      +   +  ++    
Sbjct: 71  RGGIIREVLVQEGDRVTAGQILARQEDDEARLAVQSSRAAVNQAESQLAAIRVDINTAQR 130

Query: 123 KYDVLEK----------AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           +Y+ LE+            +   + +     +  S  + V              +LT +R
Sbjct: 131 EYNRLERLVDTNFVAAQRLDQARDSIATAQARMSSASAAVQTARAQLAQAEYNQELTVIR 190

Query: 173 SIYLNRL 179
           +    R+
Sbjct: 191 APTAGRI 197



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 48/141 (34%), Gaps = 2/141 (1%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--EFANYLKEISRDLEQN 269
           S+  +NQ E  +    +++     E   + R ++  +  A    +  + +      +   
Sbjct: 107 SRAAVNQAESQLAAIRVDINTAQREYNRLERLVDTNFVAAQRLDQARDSIATAQARMSSA 166

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                   ++L   E  +E   I +P AG I    +   +  +  +   M  +       
Sbjct: 167 SAAVQTARAQLAQAEYNQELTVIRAPTAGRIARRYANPGAGASTLNVSAMFDLEPDAPRI 226

Query: 330 IRAKVTPKQIQHVKKGYTATV 350
            RA++    + +V  G    +
Sbjct: 227 ARAEIVESDLPNVSVGQAVEI 247


>gi|218700836|ref|YP_002408465.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli IAI39]
 gi|218370822|emb|CAR18635.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli IAI39]
          Length = 387

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 76/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP     ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPAH-QMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G    +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQPVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.0 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 83/232 (35%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K   LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSDRRKYFALLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|157369575|ref|YP_001477564.1| secretion protein HlyD family protein [Serratia proteamaculans 568]
 gi|157321339|gb|ABV40436.1| secretion protein HlyD family protein [Serratia proteamaculans 568]
          Length = 342

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/369 (12%), Positives = 113/369 (30%), Gaps = 82/369 (22%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   +   +    SG I+   V +  Q+  G  L T +D              ++ R  +
Sbjct: 41  VVSADYTLVAPKISGYIRSVNVSDNQQVKAGEVLATLDD--------------RDYRVAL 86

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +T ++ L                                 ++    +SS+   L  +   
Sbjct: 87  ETAQANL---------------------------------QISQAKLSSIQAQLDQQQAN 113

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +          E   S  +A L+   ++    + L +    + ++  +   ++  +  +L
Sbjct: 114 IAQQ-------EAGVSASQATLNYAGQNADRYRRLLKTGTATADEQQKSASVMQTAAAQL 166

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           ++N     +  + +  L                   +Q +   A   + +          
Sbjct: 167 KQNQAAVVSARKEVGVLQ---------------ASRKQAEANIAASQASVDQARLNLSYT 211

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I++PIAG++   ++     +      L+ +VP  +   + A     Q+ +V  G   ++
Sbjct: 212 QIIAPIAGSV-GQRAVRQGAWVSAGTRLLAVVPLQQSYVV-ANFLETQLANVSAGQPVSI 269

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNN---- 402
                  +     +  ++ I P           +  T  Y +V+ ++      + N    
Sbjct: 270 TVDALPGVT---LRGHVDSIAPATGSTFAAISADNATGNYTKVVQRLPVKILLEPNQPEL 326

Query: 403 IELRNGFPA 411
             LR G   
Sbjct: 327 ARLRVGMSV 335


>gi|186682788|ref|YP_001865984.1| RND family efflux transporter MFP subunit [Nostoc punctiforme PCC
           73102]
 gi|186465240|gb|ACC81041.1| efflux transporter, RND family, MFP subunit [Nostoc punctiforme PCC
           73102]
          Length = 485

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 108/357 (30%), Gaps = 82/357 (22%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + +G  L   +       I   K  +++ +  ++++++ L          +   
Sbjct: 122 VKEGVFVKKGQVLAVLDGSILQSQISQAKADVESKQADVESKQADLASKQADLASNKAIV 181

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           + ++  L     K          Y                                    
Sbjct: 182 QQKQADLAQAKAKLEEAAKNYQRY------------------------------------ 205

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                      + L +   +S+ +L+ +   V  +     + ++  +  LR        A
Sbjct: 206 -----------QQLADSGTISRQELDTRSYAVKTAI----QVVNLSQENLRSAQANIGSA 250

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS------ 305
               +N    I++     + + A    ++  L+   EQ  + +P++G I    +      
Sbjct: 251 QANISNAQAIINKAKADVRSSAA----RVQQLQTQLEQTVMRAPVSGVIAEKLARVGDVT 306

Query: 306 -----FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                         +Q L  I+   +   ++AKV   Q+  VK G  A+V+     D R 
Sbjct: 307 GVPPQTQVGTVIGGTQKLFSII-RDEKLELQAKVPEIQLNQVKIG--ASVQITSDVDQRV 363

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +  +  + +I P ++ Q           V + +           L+ G  A    T 
Sbjct: 364 RS-QGRVREIQPQVNDQRREAT------VKIDLPPTTL------LKPGMFANAAITT 407


>gi|323154897|gb|EFZ41089.1| multidrug resistance protein A [Escherichia coli EPECa14]
          Length = 326

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 34  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 93

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 94  EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 147

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 148 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 193

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 194 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 251

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 252 VQRLPVRIELDQKQLEQYPLRI 273



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/151 (11%), Positives = 52/151 (34%), Gaps = 7/151 (4%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKS 115
           S  SG + K   +N   + +G  L+  +  +     +  K ++ +      +  I++++ 
Sbjct: 2   SQVSGSVTKVWADNTDFVKEGDVLVILDPTDARQAFEKAKTALASSVRQTHQLMINSKQL 61

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
             +    K  + +   +      L           +     ++S    L + + +  +  
Sbjct: 62  QANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQ 121

Query: 176 LNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
              L   LE++ ++ +A        L + + 
Sbjct: 122 AMILGTKLEDQPAVQQAATEVRNAWLALERT 152


>gi|320194826|gb|EFW69455.1| Multidrug resistance protein A [Escherichia coli WV_060327]
 gi|323159811|gb|EFZ45783.1| multidrug resistance protein A [Escherichia coli E128010]
 gi|327251404|gb|EGE63090.1| multidrug resistance protein A [Escherichia coli STEC_7v]
 gi|330908716|gb|EGH37230.1| multidrug resistance protein A [Escherichia coli AA86]
          Length = 347

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 55  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 114

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 115 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 168

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 169 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 214

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 215 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 272

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 273 VQRLPVRIELDQKQLEQYPLRI 294



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 57/160 (35%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N ++I S  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 14  VAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTH 73

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I++++   +    K  + +   +      L           +     ++S    L +
Sbjct: 74  QLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDV 133

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
            + +  +     L   LE++ ++ +A        L + + 
Sbjct: 134 AIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERT 173


>gi|319794648|ref|YP_004156288.1| hemolysin D [Variovorax paradoxus EPS]
 gi|315597111|gb|ADU38177.1| secretion protein HlyD family protein [Variovorax paradoxus EPS]
          Length = 449

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 97/280 (34%), Gaps = 32/280 (11%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSL-------LRALLSSHQKDLTMMKNLFEKN 209
           +     +L   + + R++Y N   L  + +L        ++ ++  Q DL   + L    
Sbjct: 108 LEQAEAALAQTVRQTRTLYANNGSLAAQVTLRQSDIVKAQSDIAKAQDDLQRRRALSGNG 167

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           AVS+ +LN  E  +  +  +L             +                     + Q+
Sbjct: 168 AVSKEELNHAETQLDTAKSQLAAAQAGVVAAKEALVSNQSLTE----------GTSVAQH 217

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               A   +K+       ++  + +P+ G +   ++           P+M IVP +   +
Sbjct: 218 PSVLAAA-AKVREAYLATQRVAMPAPVDGYVAK-RTVQLGQRVAAGTPMMSIVPLN-QLW 274

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDN 379
           + A     Q+++++ G    V+       ++ ++   +  +           P  +   N
Sbjct: 275 VDANFKEVQLRNIRIGQP--VKLTADVYGKKVEYDGKVAGLGVGTGSAFALLPAQNATGN 332

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            ++  +   V + +       N + +     AE+  T+K+
Sbjct: 333 WIKVVQRVPVRIALDAEQLKANPLRIGLSMDAEIDITSKS 372



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/146 (10%), Positives = 45/146 (30%), Gaps = 2/146 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + NV++I     G +     ++   +  G PL+  +  +    ++  + ++        
Sbjct: 64  VQGNVIQITPQIGGTVMAINADDTDFVKAGQPLVQLDPADAKVSLEQAEAALAQTVRQTR 123

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T  +    L  +  + +      +  +           +   N  +S     L    T++
Sbjct: 124 TLYANNGSLAAQVTLRQSDIVKAQSDIAKAQDDLQRRRALSGNGAVS--KEELNHAETQL 181

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQK 197
            +        +      +  L S+Q 
Sbjct: 182 DTAKSQLAAAQAGVVAAKEALVSNQS 207


>gi|269978102|ref|ZP_06185052.1| putative membrane-fusion protein [Mobiluncus mulieris 28-1]
 gi|269933611|gb|EEZ90195.1| putative membrane-fusion protein [Mobiluncus mulieris 28-1]
          Length = 752

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/293 (11%), Positives = 91/293 (31%), Gaps = 12/293 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +     +      ++  R       +AL   +   D+   +  S +  L     +     
Sbjct: 255 VTQEAALRTAYQEVEKTRMSASRIGAALKEADRMRDLESISLASDKADLALRQKELQKAQ 314

Query: 150 SK--VFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           +   +     + V  +L+ ++  +  +        +          S  +++   ++   
Sbjct: 315 NDSSLSKEKKAEVINALQWEINHLTEVIAEGEAKTQAAKEKYDTAWSQEKENKLKIRQAT 374

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           E   +++         V +   + ++ +   ++ +   N    +A        +   R +
Sbjct: 375 ENLGMARRQYRLALLKVDRELADAQDAVARAQDGILDANAGLQQAEAAAQLQNRTNQRAI 434

Query: 267 EQNQR--TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           E  +   T A     +  L       T+ +P+ G I    +         +Q  + +V  
Sbjct: 435 ETARSGATNAQGQQAIAKLRADINSATVRAPMTGVITSVTAK----VGSPAQGALFMVED 490

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++   ++  V  K +  +  G   T + P   D +       +  I P  S+ 
Sbjct: 491 NQNLLVKTAVKEKDVSKLSVGQQVTFKTPATGDKKY---TGTVTFISPAASRD 540



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 72/238 (30%), Gaps = 12/238 (5%)

Query: 67  IKKFQVENGSQILQGTPLLTFED--------IETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +   +V  G  +  G  L   +          +   + D +      +    DT ++  D
Sbjct: 149 VTALKVRAGDAVTTGQVLAQLDTDATVKEIASQQAAMQDAQVSKQNAINQAQDTYQNFAD 208

Query: 119 FL----NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
            L    N + +  +K  ++ + +       + +  +        S+        T  + +
Sbjct: 209 SLASGTNPEINAAKKGIKTAQAEYQKAQKTFETLKTDRATKITDSLVTQEAALRTAYQEV 268

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              R+      + L+        +   + +     A+ Q +L + +     S  +  E I
Sbjct: 269 EKTRMSASRIGAALKEADRMRDLESISLASDKADLALRQKELQKAQNDSSLSKEKKAEVI 328

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +  + H+ E+  E   +     ++      Q +            L   R Q  +
Sbjct: 329 NALQWEINHLTEVIAEGEAKTQAAKEKYDTAWSQEKENKLKIRQATENLGMARRQYRL 386


>gi|212704360|ref|ZP_03312488.1| hypothetical protein DESPIG_02415 [Desulfovibrio piger ATCC 29098]
 gi|212672219|gb|EEB32702.1| hypothetical protein DESPIG_02415 [Desulfovibrio piger ATCC 29098]
          Length = 370

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/373 (13%), Positives = 113/373 (30%), Gaps = 82/373 (21%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           + V +++  +G + +    +  ++  G  LL  +D               + R   D  +
Sbjct: 67  DRVVLEAKVNGYVAQVGFGDFQRVKAGDVLLRVQD--------------ADYRARTDQAR 112

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +  D      + L+                               +  +   +       
Sbjct: 113 AVRDKNAANLERLDLEI---------------------------GLQEACIRQARVAAEN 145

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              RLDL +             ++   ++ LF+ NAVS  + +  E  +  +    RE +
Sbjct: 146 AAARLDLAS-------------RENARVQKLFKCNAVSTREADSAEINLRTAQHSHREAL 192

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E +   R +              L++  R L +     A+  ++L           I +
Sbjct: 193 AEVRVQERKLE-------------LQKADRQLREADLRAAE--AQLQSALIDLGHTIITA 237

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P  G     +     +  ++   ++ +V       + A     QI +++ G    +    
Sbjct: 238 PGNGH-TGARKIQVGDLVREGMQVVSLVLDMSPYIV-ANYKETQIGNIRVGQPVEILIDT 295

Query: 355 YADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNI---ELR 406
           +       F+  +E I P           +  +  + +V+ +I   +AF        E+R
Sbjct: 296 FPGHT---FRGHVESISPATGATFSLLPKDTSSGNFTKVVQRIPVRIAFEPGQERLPEIR 352

Query: 407 NGFPAEVLFTAKN 419
           +G          +
Sbjct: 353 SGMSVITRIDTGS 365


>gi|197337782|ref|YP_002158065.1| hypothetical permease [Vibrio fischeri MJ11]
 gi|197315034|gb|ACH64483.1| hypothetical permease [Vibrio fischeri MJ11]
          Length = 348

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 52/293 (17%), Positives = 91/293 (31%), Gaps = 33/293 (11%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DV +  F   ++ L++          +     +  +Y+    K+T     Y++ +     
Sbjct: 85  DVKDSEFVLEDQLLMELDAPILEQEIEFIENELEQLYQEQTQKITEDFGPYISAIGAA-- 142

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +  L    K         ++  VSQ D      I   +   L              
Sbjct: 143 ----KLNLKKITKIKVNYDQYAKEGKVSQVDYAAIVGIYNTAQNNL-------------T 185

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N        E A   + ++  + Q  R        LT  +   +  +I +P  G ++   
Sbjct: 186 NAYIALNQAEIAQKQRLLAGGVAQVTRELN---QALTTKKNQLDALSIRAPYMGLVIDIN 242

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +           PL+ + P      I   + PK I+  K G   TV+ P       KK +
Sbjct: 243 AL-KGQQISIGDPLVTVSPDVAPYVIS-YLDPKHIEKAKLGALVTVKLP-----NGKKVE 295

Query: 365 AIIEKIDPIISQ---QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           A +     + S+   Q           + +KIT L       E   G P EV 
Sbjct: 296 ARVSSAIGLTSKLPIQLAKPFEGTKALLKVKITFLGGLLEK-EWVEGMPVEVY 347



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 5/195 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            +++      +   +L+II               +   + G I      V I +  +G +
Sbjct: 24  GMEKRGAYRFRWYLILAIILSPIFFMIYTFAKQHLFTVAPGIIT--TGPVIITASQNGTV 81

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           K   V++   +L+   L+  +       I+  +  ++ L     T+K   DF      + 
Sbjct: 82  KLIDVKDSEFVLEDQLLMELDAPILEQEIEFIENELEQLYQE-QTQKITEDFGPYISAIG 140

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY--LNRLDLENKS 185
                 ++   +      ++   KV     +++          + + Y  LN+ ++  K 
Sbjct: 141 AAKLNLKKITKIKVNYDQYAKEGKVSQVDYAAIVGIYNTAQNNLTNAYIALNQAEIAQKQ 200

Query: 186 SLLRALLSSHQKDLT 200
            LL   ++   ++L 
Sbjct: 201 RLLAGGVAQVTRELN 215


>gi|149001877|ref|ZP_01826850.1| phosphoribosylaminoimidazole-succinocarboxamide synthase
           [Streptococcus pneumoniae SP14-BS69]
 gi|237649898|ref|ZP_04524150.1| transport protein ComB [Streptococcus pneumoniae CCRI 1974]
 gi|237820988|ref|ZP_04596833.1| transport protein ComB [Streptococcus pneumoniae CCRI 1974M2]
 gi|147760335|gb|EDK67324.1| phosphoribosylaminoimidazole-succinocarboxamide synthase
           [Streptococcus pneumoniae SP14-BS69]
 gi|332077355|gb|EGI87816.1| bacteriocin secretion accessory family protein [Streptococcus
           pneumoniae GA41301]
          Length = 449

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/439 (11%), Positives = 145/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV--------SQND---------LNQQERIVYKSTLELRE 232
               + +  +    +L  +N          SQ +         + Q E  + +    L  
Sbjct: 189 RDYQTAKSAIETGASLAGQNLAYSLYQSYKSQGEENPQIKVQAVAQVEAQISQLESSLAT 248

Query: 233 NIHEQKN---MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              +         + + L  +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             I +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKITASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|323343918|ref|ZP_08084145.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Prevotella oralis ATCC 33269]
 gi|323095737|gb|EFZ38311.1| ABC superfamily ATP binding cassette transporter, binding protein
           [Prevotella oralis ATCC 33269]
          Length = 297

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 82/245 (33%), Gaps = 25/245 (10%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           I L    L     +  +     +K +  M+   EK  + Q    +  R        L + 
Sbjct: 71  IALRIRQLGAAKEVYASQKPDMRKQVAAMRQQLEKARLEQRRYTELVRDGAAPRKTLDDA 130

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +     + R +            +  +++               ++++ L     +  I 
Sbjct: 131 VSSVNVLERQLEAQISTLQTTDKSLDRQMHA-----------TDTQVSELADQLRKCHIS 179

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ G ++  +      +    +PL K V  +K  ++RA VT +Q+Q+VK G    V   
Sbjct: 180 SPVTGCVLE-KYVEDGEFVTIGKPLFK-VADTKQMFLRAYVTSEQLQNVKIGQHVKVM-S 236

Query: 354 HYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            Y     K +   +  I             ++ +    Y V + +       N+  L+ G
Sbjct: 237 DYGKGLTKTYDGTVTWISSQSEFTPKTILTDDERADLVYAVKISV------RNDGYLKIG 290

Query: 409 FPAEV 413
              EV
Sbjct: 291 MYGEV 295


>gi|300703069|ref|YP_003744671.1| multidrug resistance transport transmembrane protein [Ralstonia
           solanacearum CFBP2957]
 gi|299070732|emb|CBJ42027.1| putative multidrug resistance transport transmembrane protein
           [Ralstonia solanacearum CFBP2957]
          Length = 391

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/321 (11%), Positives = 89/321 (27%), Gaps = 30/321 (9%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           ++  I T    +     + DV         ++LL    + ++     +   + +   S  
Sbjct: 72  IQADIVTVAPKVSGYVERVDVANNQEVRAGQRLLRIDPREYAAQLAQYQAQVEAANASAD 131

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               ++ +        + +                   +L    A +++ L+  +    +
Sbjct: 132 NARAQLATQKATIAQAQAQLQSAEHDAQFTASQTQRYASLVASGAETRDRLSTLQNQAAQ 191

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +                 I  L                  L Q +       ++  + E 
Sbjct: 192 ARANAAAQHAALTKATLEIAAL---------------QAQLRQAEAQAKTARAQAAVAEV 236

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 + +   G +  +Q      +      LM +VP     YI A     Q++ ++ G
Sbjct: 237 NLAATELRASTDGRVGDSQVR-IGQFVSAGTRLMSVVPSH--LYITANFKETQLRRMRIG 293

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSD 400
               V    + D      +  +E + P    Q         T  + +++ ++   +A   
Sbjct: 294 QPVHVHVDAFPDE---AIEGHVESLSPGTGAQFSLLPPQNATGNFIKIVQRVPVRIALDV 350

Query: 401 NNIELRN----GFPAEVLFTA 417
            + +L+     G    V    
Sbjct: 351 TDDQLKPLLAAGMSVTVDVDT 371



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 67/217 (30%), Gaps = 4/217 (1%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++V +    SG +++  V N  ++  G  LL  +  E    +   +  ++      D  +
Sbjct: 75  DIVTVAPKVSGYVERVDVANNQEVRAGQRLLRIDPREYAAQLAQYQAQVEAANASADNAR 134

Query: 115 SALDFLNNKYDVLEKAFESRE--EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           + L          +   +S E   Q      + +++           +            
Sbjct: 135 AQLATQKATIAQAQAQLQSAEHDAQFTASQTQRYASLVASGAETRDRLSTLQNQAAQARA 194

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLEL 230
           +       L   +  + AL +  ++     K    + AV++ +L   +          + 
Sbjct: 195 NAAAQHAALTKATLEIAALQAQLRQAEAQAKTARAQAAVAEVNLAATELRASTDGRVGDS 254

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  I +  +    +  +        AN+ +   R + 
Sbjct: 255 QVRIGQFVSAGTRLMSVVPSHLYITANFKETQLRRMR 291


>gi|283779010|ref|YP_003369765.1| efflux transporter, RND family, MFP subunit [Pirellula staleyi DSM
           6068]
 gi|283437463|gb|ADB15905.1| efflux transporter, RND family, MFP subunit [Pirellula staleyi DSM
           6068]
          Length = 539

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 67/445 (15%), Positives = 133/445 (29%), Gaps = 87/445 (19%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSI---LLPIEISVS------------------ 45
           +  KR    S   + LL+I G + L+ WS     LP                        
Sbjct: 21  RARKRGTTLSWG-LPLLTIAGFVALVGWSARDFWLPAAPVTIMPVLLTRAEVQQAGTPLF 79

Query: 46  -SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            ++G I      V   +   G++++  V  G  +    P+    D +    +   +  + 
Sbjct: 80  QAAGWIEPRPTAVICSALVEGVVEQLLVVEGQNVEANQPIARLVDADVRLQLAEAESILL 139

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +   D  ++A+    +K+D                  +     +      + +   +L
Sbjct: 140 LRQAERDAARAAVASAQSKFD-------------QPVHLEAEHAEADAALATLETEINNL 186

Query: 165 KMKLTRMRSIY-LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
              +   R+ + L R DLE K  +  A+     +              +Q++ +     +
Sbjct: 187 PFLIQSARARFTLARQDLEAKQQVADAIAGRSIQK-------------AQSEFDAASATL 233

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD--LEQNQRTFADEMSKLT 281
                       +Q    R    L+ +  L+    L        L   +         + 
Sbjct: 234 ADLEQRGTTLARQQAAWQRRCEALHTKLKLKTDETLAAADSQARLTAAEAHVRQAELAIE 293

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-------------KLT 328
            ++    + T+ SPI G ++   +       +    LM +   S             K  
Sbjct: 294 TIQLRLARMTVCSPIQGRVLALHT-------RPGSRLMGLTSASESDSSSVASLYDPKQL 346

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +R  V  + +  V+ G +  +       I     + ++  I      Q N LQ      
Sbjct: 347 QVRVDVRLEDVSQVQLGQSVQLTTSASPAI----LQGVVLGITSQADIQKNTLQ------ 396

Query: 389 VILKITDLAFSDNNIELRNGFPAEV 413
           V + ITD         LR    A+V
Sbjct: 397 VKVSITDP-----PEVLRPEMLAQV 416


>gi|120553562|ref|YP_957913.1| secretion protein HlyD family protein [Marinobacter aquaeolei VT8]
 gi|120323411|gb|ABM17726.1| secretion protein HlyD family protein [Marinobacter aquaeolei VT8]
          Length = 352

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 52/402 (12%), Positives = 110/402 (27%), Gaps = 82/402 (20%)

Query: 28  IIGLITWSIL------LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           +IGL  W+        LP +   + +G I   +  ++I +  +G I++  V  G  +  G
Sbjct: 13  VIGLGVWAGWHFQPQDLP-DGFAAGNGRIEAVE--IDIAARTAGRIREILVNEGDFVRAG 69

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L   +                                     VLE      E QL   
Sbjct: 70  QVLAKMDT-----------------------------------AVLEAQLREAEAQLQRA 94

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           L    +  S V                         R   E   +  +A L + QK L  
Sbjct: 95  LIGIETAQSLV-------------------TQREAERQAAEAFIAQRKAELDAAQKRLVR 135

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L  KNA S+  L+        +   +     +       I     +           
Sbjct: 136 TRELASKNAASEAQLDDDRAAAAAAKAAVGAAEAQAAAAQAAIGRARSDVIA-------- 187

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
                   + +     + L  ++   +   + SP  G + Y +             ++ +
Sbjct: 188 -------AEASVEAARATLQRIQADIDDSVLKSPRDGRVQY-RVAQPGEVLSPGGVVLNM 239

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDN 379
           V  +   Y+   +  +Q   V  G  A +              + +  +     +  +  
Sbjct: 240 VDLTD-VYMTFFLPTEQAGRVALGAEARLVLDAAPQYVVPVEISFVADVAQFTPKTVETQ 298

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             + +  + +  +I      ++ ++++ G P           
Sbjct: 299 EERQKLMFRIKARIAPDLLREHLLQVKTGLPGMAYVRLDPRV 340


>gi|323170368|gb|EFZ56021.1| multidrug resistance protein K [Escherichia coli LT-68]
          Length = 387

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIRSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339


>gi|255524054|ref|ZP_05391015.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|296188489|ref|ZP_06856877.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|255512191|gb|EET88470.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|296046753|gb|EFG86199.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
          Length = 425

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 107/358 (29%), Gaps = 89/358 (24%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
             +  + I    +G +    V+   ++ QG  L T +  E              L+  +D
Sbjct: 72  VPNQEISIAPKSAGKVAAINVKVSDKVTQGQILFTLDSSE--------------LKAQLD 117

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                                           +  +  ++       +   SL  ++ + 
Sbjct: 118 --------------------------------QQQANLNQQQANLQKTQDSSLAQQVVQA 145

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
              Y +           +   +  +     M+ L+E  AVS+ DL+        + + L 
Sbjct: 146 NQTYQSS----------QLTYNDAKSYYEKMQKLYETGAVSKQDLDNSALKFNSAQVAL- 194

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +  ++ L  I +     ++  A    + ++    + +T                  T
Sbjct: 195 ---NAAQDNLNLIQQKVGPESVSVAQAQLQQAQAGVDSVKT-------------QISNYT 238

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + SPI G +           +      + ++      + +  V    +  ++ G + TV+
Sbjct: 239 VTSPITGIVSAVNVH-VGEISSSGTSAVTVI-DPNSLFAQINVPSNLVSKIQVGQSVTVK 296

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
               AD  EK     IE I P    +  +      Y V +KI      ++  + + G 
Sbjct: 297 I---ADSSEKTAAGTIETITPEADSKTQS------YLVKVKID-----NSKGDFKPGM 340


>gi|218547799|ref|YP_002381590.1| multidrug efflux system [Escherichia fergusonii ATCC 35469]
 gi|218355340|emb|CAQ87947.1| multidrug efflux system [Escherichia fergusonii ATCC 35469]
          Length = 390

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVISAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 60/196 (30%), Gaps = 10/196 (5%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 32  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L+T +  +     +  K ++ +              L    +V + A    +    
Sbjct: 85  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 144

Query: 140 DFLGKYHSTC--SKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQ 196
             +   ++     +   +   +V  +       ++    N+   L  K     A+  +  
Sbjct: 145 RRVPLGNANLIGREELQHARDAVISAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 204

Query: 197 KDLTMMKNLFEKNAVS 212
           +       L     VS
Sbjct: 205 EVRNAWLALERTRIVS 220


>gi|269122647|ref|YP_003310824.1| secretion protein HlyD [Sebaldella termitidis ATCC 33386]
 gi|268616525|gb|ACZ10893.1| secretion protein HlyD family protein [Sebaldella termitidis ATCC
           33386]
          Length = 354

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 66/355 (18%), Positives = 114/355 (32%), Gaps = 85/355 (23%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I    VE G  + +G  L + +                     +  EKS       KY 
Sbjct: 62  RIDIMYVEEGDTVKKGQLLASLDTEN----------------LLLQIEKSKAKIEAQKYV 105

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           VL     +R +++   L K ++  ++  N  I          L R++S +     L    
Sbjct: 106 VLRLKNGTRPKEISQQLSKLNAAKAEAENARI---------LLQRVQSAHAASDGL---- 152

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                                                   S  E+ +     K     + 
Sbjct: 153 --------------------------------------SVSKQEIDDARSRVKVTSAQVK 174

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E  D   L  A   KE   D+ + +      M++L I E    Q  + SP+ G +V ++ 
Sbjct: 175 EANDAYQLSAAGPRKE---DIAEAEAELKAAMAELAIQEYQLSQAELRSPVDG-VVRSRL 230

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
               + A   Q    ++  ++  +IRA +   Q++ VK G    +    Y+D      K 
Sbjct: 231 QEPGDMASP-QRATYLLALNEKKWIRAYIQETQLEIVKPGMEVDIYIDGYSDS---PIKG 286

Query: 366 IIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +  I  +       +QT+E      YE+ + + D     N   LR G PA +  
Sbjct: 287 QVGYISSVAEFTPKTVQTEELRTSLLYEIRVYVDD-----NKDVLRMGMPATIKI 336


>gi|145629978|ref|ZP_01785760.1| multidrug resistance protein A [Haemophilus influenzae R3021]
 gi|144984259|gb|EDJ91682.1| multidrug resistance protein A [Haemophilus influenzae R3021]
          Length = 390

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 95/292 (32%), Gaps = 37/292 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +   T +K+      S   +L   + ++  +      L++        L+  Q +L
Sbjct: 87  DILVELDDTNAKLSFEQAKS---NLANAVRQVEQLGFTVQQLQSAVHANEISLAQAQGNL 143

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L +  A+ +      +  V  +   L  + ++       +  +      +  N +
Sbjct: 144 ARRVQLEKMGAIDKESFQHAKEAVELAKANLNASKNQLAANQALLRNVPLREQPQIQNAI 203

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                             + L       ++  I SPI G +                 LM
Sbjct: 204 ------------------NSLKQAWLNLQRTKIRSPIDGYVARRNV-QVGQAVSVGGALM 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +V  ++  ++ A     Q+ +++ G    + F  Y   + K+F  +I  I+        
Sbjct: 245 AVV-SNEQMWLEANFKETQLTNMRIGQPVKIHFDLYG--KNKEFDGVINGIEMGTGNAFS 301

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             P  +   N ++  +   V +K+    F++  + +  G  A       +++
Sbjct: 302 LLPSQNATGNWIKVVQRVPVRIKLDPQQFTETPLRI--GLSATAKVRISDSS 351



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 59/175 (33%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V + S  +G + K   +N  ++  G  L+  +D       +  K ++ N    ++
Sbjct: 57  VGGNQVMVSSQVAGNVAKINADNMDKVHAGDILVELDDTNAKLSFEQAKSNLANAVRQVE 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                +  L +     E +    +  L     L K  +   + F +   +V  +      
Sbjct: 117 QLGFTVQQLQSAVHANEISLAQAQGNLARRVQLEKMGAIDKESFQHAKEAVELAKANLNA 176

Query: 170 RMRSIYLNRLDLEN-----KSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
               +  N+  L N     +  +  A+ S  Q  L + +          V++ ++
Sbjct: 177 SKNQLAANQALLRNVPLREQPQIQNAINSLKQAWLNLQRTKIRSPIDGYVARRNV 231


>gi|226331057|ref|ZP_03806575.1| hypothetical protein PROPEN_04987 [Proteus penneri ATCC 35198]
 gi|225201852|gb|EEG84206.1| hypothetical protein PROPEN_04987 [Proteus penneri ATCC 35198]
          Length = 296

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 86/272 (31%), Gaps = 34/272 (12%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + +M    +N   L+    L    L+  Q DL   + L E+N + + +
Sbjct: 5   ALEKAKTALANSVRQMHQQIINGRQLKANIVLRETELTKLQNDLRRREVLGERNVIGKEE 64

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      V  +   L     +       I                ++             
Sbjct: 65  LQHAREAVSTAKAALEVAREQYNANQAIILNTPIAQQPSVLQASTDVRNAWL-------- 116

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       E+  ILSP  G +   +S          +PLM IVP +   +I A   
Sbjct: 117 ----------ALERTKILSPTDGYVSR-RSVQVGAQVAPGKPLMAIVPITG-MWIDANFK 164

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+ +++ G  A +    Y   ++  +   +  +D          P  +   N ++  +
Sbjct: 165 ETQLANMRIGQPAKITTDFYG--KKVIYHGTVLGLDMGTGSAFSLLPAQNASGNWIKVVQ 222

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
              V + + +   ++  + +  G  +EV    
Sbjct: 223 RLPVRISLDEKELAEKPLRI--GLSSEVTVDT 252


>gi|298488117|ref|ZP_07006154.1| Membrane fusion component of tripartite multidrug resistance system
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298157396|gb|EFH98479.1| Membrane fusion component of tripartite multidrug resistance system
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 402

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 85/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   ++ + +  R  + + Q++    ++L    A+SQ
Sbjct: 101 EVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRTAVQTAQENYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +  EL                       + +  +  +   +  +    
Sbjct: 161 EELSHSRDSLTSAQSELNN------------------IQQQLSTSVALVDDTVVSSHPDV 202

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               S+L        + T+++P+ G +   +S       Q     M ++P     +I A 
Sbjct: 203 KAAASQLRQAFLANARSTLVAPVTGYVAK-RSVQLGQRIQPGTATMAVIPLD-QLWIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--------- 384
               Q+  ++ G    +    Y      K+   I+ +          L  Q         
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGSDV--KYSGTIDSLGAGTGSAFALLPAQNATGNWIKI 318

Query: 385 -EYYEVILKITDLAFSDNNIEL 405
            +   V + I     + + + +
Sbjct: 319 VQRVPVRVHINPEELAKHPLRI 340



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 13/188 (6%)

Query: 10  KRNHPASLKR----MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
            +  P   KR    + L  I+ I+GL  W+           + +     NVVEI    +G
Sbjct: 14  SQQTPKPGKRKFLLIGLAVIVVILGLAIWAWYEFYGQWSEETDDAYVNGNVVEITPLVTG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +     ++G  + +G  LL F+  +    +   + ++  +   +    S +D +  +  
Sbjct: 74  TVISIGADDGDLVHEGQVLLKFDPSDAEVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLA 133

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
               A ++ +E              +    G +     L      + S      +++ + 
Sbjct: 134 AQRTAVQTAQENY---------NRRRSLAAGGAISQEELSHSRDSLTSAQSELNNIQQQL 184

Query: 186 SLLRALLS 193
           S   AL+ 
Sbjct: 185 STSVALVD 192


>gi|68249485|ref|YP_248597.1| multidrug resistance protein A [Haemophilus influenzae 86-028NP]
 gi|68057684|gb|AAX87937.1| multidrug resistance protein A [Haemophilus influenzae 86-028NP]
          Length = 390

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 95/292 (32%), Gaps = 37/292 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +   T +K+      S   +L   + ++  +      L++        L+  Q +L
Sbjct: 87  DILVELDDTNAKLSFEQAKS---NLANAVRQVEQLGFTVQQLQSAVHANEISLAQAQGNL 143

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L +  A+ +      +  V  +   L  + ++       +  +      +  N +
Sbjct: 144 ARRVQLEKMGAIDKESFQHAKEAVELAKANLNASKNQLAANQALLRNVPLREQPQIQNAI 203

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                             + L       ++  I SPI G +                 LM
Sbjct: 204 ------------------NSLKQAWLNLQRTKIRSPIDGYVARRNV-QVGQAVSVGGALM 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +V  ++  ++ A     Q+ +++ G    + F  Y   + K+F  +I  I+        
Sbjct: 245 AVV-SNEQMWLEANFKETQLTNMRIGQPVKIHFDLYG--KNKEFDGVINGIEMGTGNAFS 301

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             P  +   N ++  +   V +K+    F++  + +  G  A       +++
Sbjct: 302 LLPSQNATGNWIKVVQRVPVRIKLDPQQFTETPLRI--GLSATAKVRISDSS 351



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 59/175 (33%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V + S  +G + K   +N  ++  G  L+  +D       +  K ++ N    ++
Sbjct: 57  VGGNQVMVSSQVAGNVAKINADNMDKVHAGDILVELDDTNAKLSFEQAKSNLANAVRQVE 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                +  L +     E +    +  L     L K  +   + F +   +V  +      
Sbjct: 117 QLGFTVQQLQSAVHANEISLAQAQGNLARRVQLEKMGAIDKESFQHAKEAVELAKANLNA 176

Query: 170 RMRSIYLNRLDLEN-----KSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
               +  N+  L N     +  +  A+ S  Q  L + +          V++ ++
Sbjct: 177 SKNQLAANQALLRNVPLREQPQIQNAINSLKQAWLNLQRTKIRSPIDGYVARRNV 231


>gi|107102386|ref|ZP_01366304.1| hypothetical protein PaerPA_01003448 [Pseudomonas aeruginosa PACS2]
 gi|218890966|ref|YP_002439832.1| putative secretion protein [Pseudomonas aeruginosa LESB58]
 gi|218771191|emb|CAW26956.1| probable secretion protein [Pseudomonas aeruginosa LESB58]
          Length = 354

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/368 (11%), Positives = 96/368 (26%), Gaps = 84/368 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++   VE+   +  G  L   +D +                       +  D L  + 
Sbjct: 56  GFVQDVLVEDNQPVKAGQLLARLDDRDF----------------RTALAAAEADVLGAEA 99

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++       + +Q L    +                                       K
Sbjct: 100 NLANAEANLQRQQALIEQAR--------------------------------------AK 121

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A L   + + +  + L  K A S  +  Q +  +  ++  L E         + +
Sbjct: 122 VRAEQAELVFARHEQSRYQTLASKGAGSLQNAQQAQSRIDTASARLAEGQAAVDATRKQV 181

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           + L                  + Q +       ++            + +P  G +   +
Sbjct: 182 SVLEAR---------------VGQARGDLQRMQARRDQARLDLSYCELRAPFDGQV-GRR 225

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y      L+ +VP  +   +       Q+ HV  G    +R   +     K  +
Sbjct: 226 QLRVGAYVTPGSALLAVVPLQQAYVV-GNFQETQLTHVSPGQAVEIRVDTFP---GKVLR 281

Query: 365 AIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLF- 415
             ++ I P      +    +  T  + +V+ +I      +       +LR G   E    
Sbjct: 282 GHVDSIAPATGLSFAPIAPDNATGNFTKVVQRIPVKIVLEPRQAMAGKLRVGMSVEARID 341

Query: 416 -TAKNTTL 422
                 + 
Sbjct: 342 TATGTRSA 349


>gi|283835581|ref|ZP_06355322.1| multidrug resistance protein A [Citrobacter youngae ATCC 29220]
 gi|291068792|gb|EFE06901.1| multidrug resistance protein A [Citrobacter youngae ATCC 29220]
          Length = 390

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 83/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + R  L+  Q D      L   N + + 
Sbjct: 99  QAFEKAKTALASSVRQTHQLMINSKQLQASIEVQRTALAQAQSDFNRRVPLGNANLIGRE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 159 ELQHARDAVASAQAQLDVAIQQYNANQAMILGSKLEDQPAVQQAATEVRNAWL------- 211

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   +S         + PLM +VP +   ++ A  
Sbjct: 212 -----------ALERTKIVSPMTGYVSR-RSVQPGAQISPTTPLMAVVPATN-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ H++ G  ATV    Y D    K+   +  +D          P  +   N ++  
Sbjct: 259 KETQLAHMRIGQPATVISDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 316

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++     + + + +
Sbjct: 317 QRLPVRIELDAQQLAQHPLRI 337



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 50/160 (31%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK------- 104
              N V+I +  SG + K   +N   + QG  L+T +  +     +  K ++        
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVKQGDVLVTLDQTDAKQAFEKAKTALASSVRQTH 116

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    +++++         +  F  R       L               +     +
Sbjct: 117 QLMINSKQLQASIEVQRTALAQAQSDFNRRVPLGNANLIGREELQHARDAVASAQAQLDV 176

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            ++        +    LE++ ++ +A        L + + 
Sbjct: 177 AIQQYNANQAMILGSKLEDQPAVQQAATEVRNAWLALERT 216


>gi|182678991|ref|YP_001833137.1| secretion protein HlyD family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182634874|gb|ACB95648.1| secretion protein HlyD family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 401

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/364 (11%), Positives = 106/364 (29%), Gaps = 73/364 (20%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
              KR     L    +++ + + G   W     +E +  +      +   + +    +G 
Sbjct: 55  ARQKRGGTVKLVGFLVVAALALGGGYYWFTSRNLESTDDA----FTDGRAISVAPRVAGQ 110

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V +   + +G PL+  +  + T       VS  + + ++D  K+         ++
Sbjct: 111 VVALDVTDNQFVRKGDPLIHIDPSQFT-------VSRDSAQGNLDMAKAQFAGEQYGAEI 163

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             K + +  +Q                                            + + +
Sbjct: 164 ARKNYPAVLQQ-------------------------------------------SQAQLA 180

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           + +A L     D    K+L  K A +Q +++  E    ++  ++             + +
Sbjct: 181 VAQANLFRATADNKRQKSL-PKQATTQQEVDAAEAAYRQAEAQV------------QLAQ 227

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                N      +      + Q +       ++L       +   + +P  G I      
Sbjct: 228 AQVFQNSPVPQRIGVADSTVGQLKGQVEQAQAQLDQANLNLDWTVVRAPQDGWITKRNV- 286

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
               Y    Q +  IV  S   ++ A     Q+  ++ G    +    Y  +        
Sbjct: 287 EVGTYVSPGQQIFSIV--SPEVWVTANFKENQLDRMRAGQPVKIEVDAYPHL---DLHGH 341

Query: 367 IEKI 370
           ++ I
Sbjct: 342 VDSI 345


>gi|328543090|ref|YP_004303199.1| Multidrug resistance efflux pump-like protein [polymorphum gilvum
           SL003B-26A1]
 gi|326412836|gb|ADZ69899.1| Multidrug resistance efflux pump-like protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 386

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/366 (13%), Positives = 106/366 (28%), Gaps = 89/366 (24%)

Query: 44  VSSSGEILNEDNVVEIKSPFSG---IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           V   G ++    V+ +  P +     I +  V  G ++ QG  L   +            
Sbjct: 80  VLGLGRLVPAGKVITLALPSAAGDAKIVRLDVAEGQRVAQGQILAVLDT----------- 128

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                                          E R    +D      +      N+   +V
Sbjct: 129 -------------------------------EPRLRNAIDLAAATVAVREADLNHARETV 157

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             SL      +       L              + +++L   K L  +N VS+  L + +
Sbjct: 158 RASLDQARAAVARQEAAAL--------------TARQELERTKTLRARNIVSEAVLERAQ 203

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
               ++      N+ E +  L             + +   +   D+    R  A   ++L
Sbjct: 204 GAADQAE----RNVEEARAALSR-----------YLSEAPDSQSDVVVALRNLASAEAQL 248

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVT 335
              E+  E+  + +PIAGT++          A+  +      ++ I   +    +  ++ 
Sbjct: 249 RAAEQDLEEAYVRAPIAGTVLEIH-------ARPGEKPGAAGVLDIA-DTDDMTVEVEIY 300

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFK--AIIEKIDPIISQQDNNLQTQEYYEVILKI 393
             QI  V  G    +                 ++ K   II +          +EV +++
Sbjct: 301 QAQIARVAVGAPVEITGDALPAPLSGTVSRIGLMVKRQSIIDKDPAANTDARVFEVQVRL 360

Query: 394 TDLAFS 399
              + +
Sbjct: 361 DRPSSA 366


>gi|219848449|ref|YP_002462882.1| secretion protein HlyD family protein [Chloroflexus aggregans DSM
           9485]
 gi|219542708|gb|ACL24446.1| secretion protein HlyD family protein [Chloroflexus aggregans DSM
           9485]
          Length = 504

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 52/444 (11%), Positives = 130/444 (29%), Gaps = 101/444 (22%)

Query: 44  VSSSGEILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           V  +G ++    V  +          G + +  V+ G ++  G  + + +       I  
Sbjct: 49  VIVNGTLMASGRVQPMTVLDLSFVNPGSVAEVVVQLGDRVQAGDVMASLDVRTLDLTIAE 108

Query: 99  KKVSIKNLRCHIDT----------EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +V++   + + +           E++ ++    +  + +      +  +     +    
Sbjct: 109 ARVALAEAQANYEQLISGATPEQIEQAEVEIARARARLADGRTNVTQSDIAAAQAELREA 168

Query: 149 CSKVFN-----------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            + +                ++V  +     TR+ ++   +  LE++   L   L + Q 
Sbjct: 169 KAVLERLKKGITPEDKARLEAAVAEARARLQTRINTLAGEKTQLESQIERLANELRNAQD 228

Query: 198 DLTMMK-----------NLFEKNAVSQNDLNQQ--------------------------- 219
           D +  K            L +    ++  L +                            
Sbjct: 229 DYSRTKWANEQIIASGGQLTQAQIDNETRLLRAVENAEHRLQEARVALETVRQNEFSEIA 288

Query: 220 --ERIVYKSTLELRE--------NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             +  V +S   L E         I   +  +        +  +   N +     +L + 
Sbjct: 289 AYQAEVQQSEALLAEALRPVTLDQIAAAEKRILQAEAKLAQFTINHPNEVAVYEAELRKA 348

Query: 270 QRTFADEMS-------------------KLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           +   A   +                   +L   E  RE+  I +PI GT+V   +     
Sbjct: 349 EADLARLTAPPPSAQIAIAQARIERAEIELRKAELNRERYQIRAPIDGTVVGVYA-QPGQ 407

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             + SQ ++ +    +   +   ++   I  V++    T+ F    D+R       +  I
Sbjct: 408 TVEASQRVITLATLDRWQIVVTNLSELHISLVQENDPVTISFIALPDVR---LSGRVSYI 464

Query: 371 DPIISQQDNNLQTQEYYEVILKIT 394
           +P+  +          Y V +   
Sbjct: 465 EPVGQETGIGTT----YTVHIIPD 484


>gi|163847676|ref|YP_001635720.1| secretion protein HlyD family protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222525535|ref|YP_002570006.1| secretion protein HlyD family protein [Chloroflexus sp. Y-400-fl]
 gi|163668965|gb|ABY35331.1| secretion protein HlyD family protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449414|gb|ACM53680.1| secretion protein HlyD family protein [Chloroflexus sp. Y-400-fl]
          Length = 506

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 113/335 (33%), Gaps = 16/335 (4%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +       +   K  ++     +  EK+ L+    +     +  +    +      +  +
Sbjct: 185 DRARLEAAVAEAKARLQTRINTLAGEKTQLESQIERLANELRNAQDDYSRTAWANQQIVA 244

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              ++    I +  R L+      R +   R+ LE       + +++++ ++   + L  
Sbjct: 245 NGGQLTQAQIDNETRLLRAVENAERRLQEARVALETVRQNEFSEIAAYRAEVEQAEALLA 304

Query: 208 KNAVSQN--DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-ISR 264
             +       +   E+ + ++   L +      N +        +A  +FA  + E  S 
Sbjct: 305 DASRPATPDQIAAAEKRILQAEARLAQLTINHPNEVAVYEAELRKAEADFARLVAEPTSA 364

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            +   Q        ++   E  RE+  I +PI  T+V           + +Q ++ +   
Sbjct: 365 QIAIAQARIERAEIEVRRAELNRERYQIRAPIDATVVTVTV-QPGQTVEANQRVITLATL 423

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
            +   +   ++   +  +++    T+ F    D+R       +  I+PI  +        
Sbjct: 424 DQWQIVVPNLSEIHVSLIQENDPVTISFIALPDLR---LSGRVSYIEPIGQETGIGTT-- 478

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             Y V +          +  LR    A+V+F+A  
Sbjct: 479 --YTVRIIPDSW-----DQRLRWNMNAQVVFSAGQ 506


>gi|332088164|gb|EGI93286.1| multidrug resistance protein K [Shigella boydii 5216-82]
          Length = 387

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIRSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339


>gi|315615073|gb|EFU95710.1| multidrug resistance protein A [Escherichia coli 3431]
          Length = 347

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 55  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 114

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 115 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 168

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 169 ------------ALERTRIISPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 214

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 215 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 272

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 273 VQRLPVRIELDQKQLEQYPLRI 294



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 57/160 (35%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N ++I S  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 14  VAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTH 73

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I++++   +    K  + +   +      L           +     ++S    L +
Sbjct: 74  QLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDV 133

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
            + +  +     L   LE++ ++ +A        L + + 
Sbjct: 134 AIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERT 173


>gi|194432934|ref|ZP_03065218.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Shigella dysenteriae 1012]
 gi|194418922|gb|EDX35007.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Shigella dysenteriae 1012]
 gi|320180362|gb|EFW55293.1| Multidrug resistance protein A [Shigella boydii ATCC 9905]
          Length = 387

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIRSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339


>gi|89896403|ref|YP_519890.1| hypothetical protein DSY3657 [Desulfitobacterium hafniense Y51]
 gi|89335851|dbj|BAE85446.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 517

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/355 (11%), Positives = 105/355 (29%), Gaps = 64/355 (18%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V+ G  +  G  L   +       +     S+K    +   +K   +      
Sbjct: 70  GKVREIYVKVGDAVTAGQALAQMDTETLQQEVTESMASLKEAELNWQQQKVEAEG----- 124

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   +  +          +         ++   +SL   +             E+ 
Sbjct: 125 --------TLVKARQALRTAEQNADPAYLQNQLAIAEQSL--LIAGNNLAASQLSGDESS 174

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +  L+  Q DL  ++N +   A         E+ V  +  +L              
Sbjct: 175 ILQAKTALTQAQSDLINVQNTYNGGA---------EQAVDSAKADLE------------- 212

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                         + E+     Q + + A   + +   ++   + T+++P  G I+   
Sbjct: 213 --------------IAEVKLARLQERTSLAQAETAVVKAQENLAKATLVAPSDGVIIEIP 258

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                     +  ++ +    +L  + + V+  ++  +K G  A +         E    
Sbjct: 259 V-KEGQTLSDTTTVLNLATGGELLIVESYVSQDEVTKIKTGQKANISL---DSAPEDYMS 314

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           A + ++    +   N       ++V +++ ++  +     +R G  A V      
Sbjct: 315 ATVTQVALKGTTTQNVTT----FQVTMQMDEVTDA-----IRPGMNANVGIIIAE 360


>gi|38233095|ref|NP_938862.1| hypothetical protein DIP0483 [Corynebacterium diphtheriae NCTC
           13129]
 gi|38199354|emb|CAE48993.1| Putative secreted protein [Corynebacterium diphtheriae]
          Length = 545

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/391 (11%), Positives = 110/391 (28%), Gaps = 55/391 (14%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +  S++ SG +  + +V  + S  +G ++   V+ G +I  G  L           ++ 
Sbjct: 46  EVSQSINLSGTLGPKRDV-VLASKLTGPVEALNVKVGDRIETGQVLAQINTDNERGELNA 104

Query: 99  KKVSIKNLRCHIDT--EKSALDFLNN--------------------------------KY 124
                           E++ L +                                     
Sbjct: 105 NYAQQAQNYAQSMAAVEQAQLQYQQTWDALHQGLNGEVNGAENALHAADHEYAEAKKLFE 164

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D L       ++ L       +S    V    + +V  S     T +     +  D   K
Sbjct: 165 DSLHNRNAGIDDALKAQANAVNSARDGVETASLDAVRASFSALGTALNGASEDATDTAQK 224

Query: 185 SSLLRAL-------------LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
               RA              + S  +       L  +    ++ L + ++ +      + 
Sbjct: 225 LQQQRASKLNTQAIEQGIAAVDSVNRARQAWDALNREQKNYEDALVKVDQSLATQQRAVA 284

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +    + +  R +     +AN + A   + + + +       A        LE +  + +
Sbjct: 285 KAFAARNDAARGLETARLQANNQLATQSQAVDQAIRAADAGNAVAAVANRKLELSIGEAS 344

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +PI G +       +    +  +  +  +       +R  V+   +  +K G   +  
Sbjct: 345 VRAPIRGVVTSV----TGQVGKPVEGALLTIADDTDMLVRGTVSEADVAKIKVGNEVSFT 400

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
            P       K+FK  +  +           +
Sbjct: 401 TPA---TGTKQFKGRVSAVSTAAESNAGEPE 428


>gi|308187854|ref|YP_003931985.1| multidrug resistance efflux transporter emrA [Pantoea vagans C9-1]
 gi|308058364|gb|ADO10536.1| multidrug resistance efflux transporter emrA [Pantoea vagans C9-1]
          Length = 390

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 88/262 (33%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +   +L +  L+  + DL   + L   N + +
Sbjct: 98  EQAFEKAQTALATSVRQTHQLMINGKQYQASITLQQTALAQAEADLKRREPLGAANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E                  NQ   
Sbjct: 158 EELQHARDAVATAKAQLDVAIQQYNANQAMILNTSLE------------------NQPAV 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L       ++  I SP+ G +   +S    +    S PL+ +VP +   ++ A 
Sbjct: 200 QQSAAELRDAWLALQRTEIRSPMDGFVSR-RSVQVGSQISTSTPLLAVVPATN-LWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+  V+ G  ATV    Y D  E  ++  +  +D          P  +   N ++ 
Sbjct: 258 FKETQLAGVRIGQPATVVADIYGD--EVVYQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++     + + + +
Sbjct: 316 VQRLPVRIELNQDDIARHPLRI 337



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/215 (10%), Positives = 68/215 (31%), Gaps = 25/215 (11%)

Query: 20  MTLLSIIGIIGLITWSI--------LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + +L++I ++  I W +            + +  +        N V++ +  SG + K  
Sbjct: 24  LIVLALIFVLIGIAWGVYWFLVLRHFQETDDAYVA-------GNQVQVMAQVSGSVNKVW 76

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-------NLRCHIDTEKSALDFLNNKY 124
            E+   + +G  L++ +  +     +  + ++         L  +    ++++       
Sbjct: 77  FEDTDFVKKGDVLVSLDKTDAEQAFEKAQTALATSVRQTHQLMINGKQYQASITLQQTAL 136

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E   + RE      L               +     + ++        +    LEN+
Sbjct: 137 AQAEADLKRREPLGAANLIGREELQHARDAVATAKAQLDVAIQQYNANQAMILNTSLENQ 196

Query: 185 SSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
            ++ ++        L + +          VS+  +
Sbjct: 197 PAVQQSAAELRDAWLALQRTEIRSPMDGFVSRRSV 231


>gi|154492711|ref|ZP_02032337.1| hypothetical protein PARMER_02348 [Parabacteroides merdae ATCC
           43184]
 gi|154087016|gb|EDN86061.1| hypothetical protein PARMER_02348 [Parabacteroides merdae ATCC
           43184]
          Length = 416

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/355 (14%), Positives = 111/355 (31%), Gaps = 91/355 (25%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---------NEDNVV-- 57
            K++ P        L ++G I     +  L ++    + G +              V   
Sbjct: 12  QKKHIPYVAGGAFFLILVGWIVFGDHASTLKVDARGVNIGNVTKEQFNDFVRVNGQVQPI 71

Query: 58  -EIK--SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             ++      GI+++  VE G+Q+ +G  ++      +   +DL                
Sbjct: 72  TVVQLSPEEGGIVQEKVVEEGAQVKKGDVIIRL----SNSNLDL---------------- 111

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
                                 Q+LD   +     + + N  ++     L  +L      
Sbjct: 112 ----------------------QILDAEAQLAEKQNFLRNTQVTMEQDKLNNQL------ 143

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                    + + L   ++ +++     K L+E+N +++ +  +      K   EL    
Sbjct: 144 ---------EKAQLDVDMTRYRRAYNQQKKLYEENLIAKEEFLK-----AKEDFELASKK 189

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           ++       + E   + ++     + E+   L   ++  A    +       +E   + S
Sbjct: 190 YDL------VVERLRQDSISRTIQMDEMETSLSNMRKNIALVHER-------KEHLNVRS 236

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            I G  +              Q + +I   S    I A +    I  VKKG +AT
Sbjct: 237 QIDGE-LGLLDVVLGQNVSAGQKIGQINDLSD-YKIEALIDEHYIDRVKKGLSAT 289


>gi|298482849|ref|ZP_07001032.1| ABC transport system [Bacteroides sp. D22]
 gi|298271049|gb|EFI12627.1| ABC transport system [Bacteroides sp. D22]
          Length = 303

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 91/256 (35%), Gaps = 39/256 (15%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         M+S+   R DL  + +  +  + + +++   ++NL    A +Q  L+ 
Sbjct: 72  QLYLKKLQLEASMKSVENQRPDLAKQIAATKQQIVTAERERKRVENLLAAGAANQKQLDD 131

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  V     +L       +N    + E  +   ++ A                      
Sbjct: 132 WDAQVKLLERQLVAQESSLRNSTNSLTEQGNSVAIQVAQ--------------------- 170

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E    +  + SPIAGT++  +   +   A   +PL K V      Y+RA +T +Q
Sbjct: 171 ----VEDQLVKCHVQSPIAGTVLA-KYAEAGELAAIGKPLFK-VGEVDRMYLRAYITSEQ 224

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV +  Y +  +K +   +  I              N +    Y V + +
Sbjct: 225 LSKVKLGDQVTV-YADYGNSEQKAYPGEVTWISDRSEFTPKTILTKNERANLVYAVKIAV 283

Query: 394 TDLAFSDNNIELRNGF 409
                  N+  L+ G 
Sbjct: 284 ------KNDGALKIGM 293


>gi|90422011|ref|YP_530381.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90104025|gb|ABD86062.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 387

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 98/299 (32%), Gaps = 28/299 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +E QL++            F   +      L    T   ++  N         L+ A ++
Sbjct: 94  KEGQLVNTGDVLFQIDPVPFQLAVQQAKAKLDDAKTSHDNLVANVKLYGQTVELVNAGIA 153

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q+D+    +L + +A SQ DL+     +  +  +L+    +    L  +     E  L
Sbjct: 154 IKQRDVERKGSLVKSSAGSQLDLDNSNSALVSAQAQLQLVKQQLSTALNQLL-GNPELPL 212

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E      +    L+  QR                +  T+ +P+ GT     +     +  
Sbjct: 213 EQFPAYMQAKAALDDAQRNL--------------DLSTVRAPMNGTATQVDNIQLGRFVA 258

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              P+  ++  +   ++ A        +V  G   T+    + D     F   +  + P 
Sbjct: 259 AGNPVFSVI-DTTAPWVDANPKESDFTYVTVGQKVTIDIDAFPDH---AFIGTVGSLSPG 314

Query: 374 ISQQ----DNNLQTQEYYEVILKITDLAFSDNN----IELRNGFPAEVLFTAK-NTTLA 423
              Q         T  + +V+ ++    + D N     +L+ G  + V    K   +LA
Sbjct: 315 TGAQFAILPAQNATGNFVKVVQRVPVRIYFDTNDRAVRKLKAGMSSYVSIDTKHTRSLA 373


>gi|323180107|gb|EFZ65659.1| multidrug resistance protein A [Escherichia coli 1180]
          Length = 334

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 42  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 101

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 102 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 155

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 156 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 201

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 202 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 259

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 260 VQRLPVRIELDQKQLEQYPLRI 281



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 57/159 (35%), Gaps = 7/159 (4%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----R 107
             N ++I S  SG + K   +N   + +G  L+T +  +     +  K ++ +      +
Sbjct: 2   AGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTHQ 61

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             I++++   +    K  + +   +      L           +     ++S    L + 
Sbjct: 62  LMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQAQLDVA 121

Query: 168 LTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
           + +  +     L   LE++ ++ +A        L + + 
Sbjct: 122 IQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERT 160


>gi|209919856|ref|YP_002293940.1| multidrug resistance protein [Escherichia coli SE11]
 gi|256017471|ref|ZP_05431336.1| multidrug resistance protein [Shigella sp. D9]
 gi|307311028|ref|ZP_07590672.1| efflux pump membrane protein [Escherichia coli W]
 gi|332278476|ref|ZP_08390889.1| EmrKY-TolC multidrug resistance efflux pump membrane fusion protein
           component [Shigella sp. D9]
 gi|209913115|dbj|BAG78189.1| multidrug resistance protein [Escherichia coli SE11]
 gi|306908534|gb|EFN39031.1| efflux pump membrane protein [Escherichia coli W]
 gi|315061703|gb|ADT76030.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli W]
 gi|323184324|gb|EFZ69700.1| multidrug resistance protein K [Escherichia coli 1357]
 gi|323377716|gb|ADX49984.1| efflux pump membrane protein [Escherichia coli KO11]
 gi|324117710|gb|EGC11609.1| efflux pump membrane protein [Escherichia coli E1167]
 gi|332100828|gb|EGJ04174.1| EmrKY-TolC multidrug resistance efflux pump membrane fusion protein
           component [Shigella sp. D9]
          Length = 387

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     I                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALIMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 85/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD- 180
            +    +   +      L   G       +     + S   +L   +   ++     ++ 
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALIMNT 184

Query: 181 -LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|311747294|ref|ZP_07721079.1| putative membrane fusion efflux protein [Algoriphagus sp. PR1]
 gi|126579007|gb|EAZ83171.1| putative membrane fusion efflux protein [Algoriphagus sp. PR1]
          Length = 431

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 94/339 (27%), Gaps = 44/339 (12%)

Query: 103 IKNLRCHIDTEKSALDFLNNKYDV-LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            K  R  I  + SA   +  + +V L         +L    G   +    +      +  
Sbjct: 44  AKAKRAQIIEKVSASGEIQPEVEVKLSPDVAGEIIELNVIEGDSVAEGKLLVKIRPDNFI 103

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +L      +     N    +       A  +  + +    K L+E+ A+S  D    + 
Sbjct: 104 SALDRAKANLNQQMANLAQAKASLQRSEAQFTQAELNYNRQKGLYEQKAISDADFETAQA 163

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               +  +L     E        +E   +++    N   E                    
Sbjct: 164 NYITAQKDL-----EAAKQNVIASEFVVKSSQATVNESAE-------------------- 198

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPK 337
                     + SP+ G +                     ++ I        +R  V   
Sbjct: 199 ----NLRLTNVYSPVDGIVSNLLVEKGERVVGTQQMAGTEMLTIA-DLSKMEVRVDVNEN 253

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI---- 393
            I  +  G T  +    Y+    KKFK ++  I    +    +      ++V ++I    
Sbjct: 254 DIIRLSMGDTTIIDVDSYS-STGKKFKGVVTSI-ANTANTKASADAVTEFKVKIRILNSS 311

Query: 394 -TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
             DL         R G  A V      TTL   +  P++
Sbjct: 312 YQDLVDEGTKYPFRPGMTASVEILT--TTLNNALTVPLS 348


>gi|306818473|ref|ZP_07452196.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|304648646|gb|EFM45948.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
          Length = 752

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/293 (11%), Positives = 91/293 (31%), Gaps = 12/293 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +     +      ++  R       +AL   +   D+   +  S +  L     +     
Sbjct: 255 VTQEAALRTAYQEVEKTRMSASRIGAALKEADRMRDLESISLASDKADLALRQKELQKAQ 314

Query: 150 SK--VFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           +   +     + V  +L+ ++  +  +        +          S  +++   ++   
Sbjct: 315 NDSSLSKEKKAEVINALQWEINHLTEVIAEGEAKTQAAKEKYDTAWSQEKENKLKIRQAT 374

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           E   +++         V +   + ++ +   ++ +   N    +A        +   R +
Sbjct: 375 ENLGMARRQYRLALLKVDRELADAQDAVARAQDGILDANAGLQQAEAAAQLQNRTNQRAI 434

Query: 267 EQNQR--TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           E  +   T A     +  L       T+ +P+ G I    +         +Q  + +V  
Sbjct: 435 ETARSGATNAQGQQAIAKLRADINSATVRAPMTGVITSVTAK----VGSPAQGALFMVED 490

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++   ++  V  K +  +  G   T + P   D +       +  I P  S+ 
Sbjct: 491 NQNLLVKTAVKEKDVSKLSVGQQVTFKTPATGDKKY---TGTVTFISPAASRD 540



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 72/238 (30%), Gaps = 12/238 (5%)

Query: 67  IKKFQVENGSQILQGTPLLTFED--------IETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +   +V  G  +  G  L   +          +   + D +      +    DT ++  D
Sbjct: 149 VTALKVRAGDAVTTGQVLAQLDTDATVKEIASQQAAMQDAQVSKQNAINQAQDTYQNFAD 208

Query: 119 FL----NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
            L    N + +  +K  ++ + +       + +  +        S+        T  + +
Sbjct: 209 SLASGTNPEINAAKKGIKTAQAEYQKAQKTFETLKTDRATKITDSLVTQEAALRTAYQEV 268

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              R+      + L+        +   + +     A+ Q +L + +     S  +  E I
Sbjct: 269 EKTRMSASRIGAALKEADRMRDLESISLASDKADLALRQKELQKAQNDSSLSKEKKAEVI 328

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  +  + H+ E+  E   +     ++      Q +            L   R Q  +
Sbjct: 329 NALQWEINHLTEVIAEGEAKTQAAKEKYDTAWSQEKENKLKIRQATENLGMARRQYRL 386


>gi|168233778|ref|ZP_02658836.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168238732|ref|ZP_02663790.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168262075|ref|ZP_02684048.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168822868|ref|ZP_02834868.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194470583|ref|ZP_03076567.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194737453|ref|YP_002115770.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197249944|ref|YP_002147714.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|238909585|ref|ZP_04653422.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|194456947|gb|EDX45786.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194712955|gb|ACF92176.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197213647|gb|ACH51044.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197288518|gb|EDY27895.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|205332164|gb|EDZ18928.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205340787|gb|EDZ27551.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205349269|gb|EDZ35900.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|320087220|emb|CBY96986.1| Multidrug resistance protein K [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 390

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 99  QAFEKAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 159 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSKLEDQPAVQQAATEVRNAWL------- 211

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 212 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   TV    Y D    K+   +  +D          P  +   N ++  
Sbjct: 259 KETQLANMRIGQPVTVITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 316

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 317 QRLPVRVELDARQLEQHPLRI 337



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 53/164 (32%), Gaps = 3/164 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFEKAKTALASSVRQTH 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 117 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 176

Query: 170 RMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            ++    N+   L +K     A+  +  +       L     VS
Sbjct: 177 AIQQYNANQAMILNSKLEDQPAVQQAATEVRNAWLALERTRIVS 220


>gi|2815577|gb|AAC38085.1| VceA [Vibrio cholerae]
          Length = 395

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 89/303 (29%), Gaps = 20/303 (6%)

Query: 137 QLLDFLGKYHSTCSK----VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           QL D   +     ++    +    + S   + +     + +   N   ++ +    +A  
Sbjct: 90  QLDDTDARLALLQAEADLALAKRRVRSYLANDEGLSAMVEAQEANEQRVKAQLKAAQADF 149

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              + DL+  ++L    +VS  +L   +    ++   L                      
Sbjct: 150 ERAKIDLSRREDLVASGSVSGEELTNAKTGFAQAQANLNAAKAAMAQAQATKLSTIGSQK 209

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              A            +        ++    +   E+  I +PI+G +   Q        
Sbjct: 210 ANAALTDNTTV----DSNPEVLLAKARYEQAKIDLERTVIRAPISGIVAKRQV-QVGRRV 264

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--KKFKAIIEKI 370
           Q   PLM +VP     Y+ A     +++ VK G   T+    Y D               
Sbjct: 265 QVGMPLMTVVPTDH-IYVDANFKEVELRDVKVGQPVTLTADLYGDDVTYHGVVAGFSGGT 323

Query: 371 DPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN---G--FPAEVLF--TAKNTTL 422
               S       T  + +V+ ++   +     +++      G    A +    T    TL
Sbjct: 324 GSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQAYPLQVGLSMVATIDTAGTTDPQTL 383

Query: 423 AQE 425
            Q 
Sbjct: 384 VQY 386


>gi|16264102|ref|NP_436894.1| hypothetical protein SM_b20368 [Sinorhizobium meliloti 1021]
 gi|15140227|emb|CAC48754.1| putative efflux transporter [Sinorhizobium meliloti 1021]
          Length = 337

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 74/211 (35%), Gaps = 28/211 (13%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            EK AV    L+  E     S L+ R ++ +++           E N      +     D
Sbjct: 78  VEKGAV-LARLDDTEARAILSELQARLSLAQEE---YRRKLALAERNTISEQTVDRARTD 133

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           + Q +   A + ++L           + +P  G ++  Q       A+    ++  V   
Sbjct: 134 VAQLEALIAGQEARLAAY-------VLRAPSDGRVLR-QDGEIGEVAEPG-TVLFWVGEP 184

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           +   + A+V  + I  V+ G  A +R   + +      +A+++ I P             
Sbjct: 185 RPLIVEAEVNEEDIPRVEVGQNAYLRSDAFPER---ALEAVVDSITPKGDPVTKT----- 236

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            Y V L++ +      +  LR G   +V   
Sbjct: 237 -YRVRLRLPE------DTPLRIGMSTDVNVV 260



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 13/119 (10%), Positives = 37/119 (31%), Gaps = 9/119 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE----NGSQILQGTPLLTFEDIETTDLI 96
              V +SG +             +  +++  VE     G ++ +G  L   +D E   ++
Sbjct: 42  AEIVYASGVVEPRVWAKV-----TSTVRERIVEQCNCEGERVEKGAVLARLDDTEARAIL 96

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
              +  +   +     + +  +        +++A     +      G+     + V   
Sbjct: 97  SELQARLSLAQEEYRRKLALAERNTISEQTVDRARTDVAQLEALIAGQEARLAAYVLRA 155


>gi|251770921|gb|EES51506.1| secretion protein HlyD family protein [Leptospirillum
           ferrodiazotrophum]
          Length = 321

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 85/232 (36%), Gaps = 15/232 (6%)

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN--MLRHINELYDEANLEFANY 258
            ++++ ++N  +  DL + +      ++ L     +      LR    + D         
Sbjct: 96  ALESIGQRNVSAFGDLARTKAQEVSLSVRLANARRDLARGEALRKGGFITDSDLDHLRTV 155

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           + +++  L + ++      + L   E      TI SP+ G +   +         + Q +
Sbjct: 156 VDDLNAQLAEIRKLAFVNRTALETTESHPLNYTIHSPLDGQVAE-RIVQVGQVVSRGQAV 214

Query: 319 MKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           + +V P     ++ AKV   ++ HV+ G    +    Y   +   F   + +I P  +  
Sbjct: 215 VSLVDPKDT--WVTAKVKETRMGHVRVGQKVDITIDAYPGRK---FHGHVFQILPTSAAA 269

Query: 378 ----DNNLQTQEYYEVILKIT-DLAFSD-NNIELRNGFPAEVLFTAKNTTLA 423
                    +  + +V  ++   ++  D  ++ LR G   EV    ++ +  
Sbjct: 270 ISLLPPENASGTFVKVTQRVPVRISIDDARDVVLRPGLSTEVRIHIRDGSPW 321



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 60/166 (36%), Gaps = 8/166 (4%)

Query: 24  SIIGIIGLITWSILLPI----EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
            IIG+ GL+  +++  +         S+ + + + ++V + +   G +    V  G  + 
Sbjct: 22  IIIGVAGLLATAVIALLYMRYNEFYVSTEDSMVDGDIVMVSANTRGRVMTLPVNMGDPVH 81

Query: 80  QGTPLLTFEDIETTDL--IDLKKVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESRE 135
           +G  L   +      L  I  + VS          ++ +L     N + D+       + 
Sbjct: 82  KGDLLARIDTTGFGALESIGQRNVSAFGDLARTKAQEVSLSVRLANARRDLARGEALRKG 141

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
             + D    +  T     N  ++ + +   +  T + +   + L+ 
Sbjct: 142 GFITDSDLDHLRTVVDDLNAQLAEIRKLAFVNRTALETTESHPLNY 187


>gi|167649022|ref|YP_001686685.1| secretion protein HlyD family protein [Caulobacter sp. K31]
 gi|167351452|gb|ABZ74187.1| secretion protein HlyD family protein [Caulobacter sp. K31]
          Length = 367

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/320 (10%), Positives = 95/320 (29%), Gaps = 13/320 (4%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E +   F+      +         ++L    +       V     + +   L   +   +
Sbjct: 37  ETTDNAFVQADTVQVSPQVSGYVAEVLVADNQRVEAGQVVARIDPAPLQAKLDQAVANAQ 96

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           ++      +++K++L +A+++     +   +    +        +   +  + ST +++ 
Sbjct: 97  ALEAAVRGVDDKAALEQAMIAQRAAGVASAQADQGRAKADLQRYDALAQQGWVSTQKVQT 156

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                      +         E       +     Q     A   + +       ++  I
Sbjct: 157 TQAGAAQSAAAVQSAQAALEAERRTAQS-LGSARAQTVAQAAAARAAVEQARIDLDRTVI 215

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P AG +V  +S       Q    LM IVP  +   + A     Q+  ++ G    ++ 
Sbjct: 216 RAPAAG-VVGARSVRPGQLVQPGVALMSIVPVGQGYIV-ANFKETQVSRLRVGQPVEIKA 273

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDN---NIEL 405
             +           ++   P   Q+            + ++  ++      +       L
Sbjct: 274 DAFGKS---VIHGKLDSFAPATGQEFALIPVENAVGNFTKITQRLPVKIVVEKSTLGSAL 330

Query: 406 RNGFPAEVLFTAKNTTLAQE 425
           R G   +V    ++ + A  
Sbjct: 331 RPGLSVDVKVDVRDRSGASF 350



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/142 (10%), Positives = 46/142 (32%), Gaps = 2/142 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + + V++    SG + +  V +  ++  G  +   +       +D    + + L   + 
Sbjct: 44  VQADTVQVSPQVSGYVAEVLVADNQRVEAGQVVARIDPAPLQAKLDQAVANAQALEAAVR 103

Query: 112 T--EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
              +K+AL+           A    ++       + +   ++        V  +      
Sbjct: 104 GVDDKAALEQAMIAQRAAGVASAQADQGRAKADLQRYDALAQQGWVSTQKVQTTQAGAAQ 163

Query: 170 RMRSIYLNRLDLENKSSLLRAL 191
              ++   +  LE +    ++L
Sbjct: 164 SAAAVQSAQAALEAERRTAQSL 185


>gi|329903140|ref|ZP_08273380.1| Putative efflux transporter [Oxalobacteraceae bacterium IMCC9480]
 gi|327548474|gb|EGF33145.1| Putative efflux transporter [Oxalobacteraceae bacterium IMCC9480]
          Length = 403

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 93/283 (32%), Gaps = 37/283 (13%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             L     + ++       +     + KL ++R++ L     +       A L++ ++  
Sbjct: 85  QLLIALEDSEARAAVEQAVAAVAQAQAKLKQIRAVAL--PVAQQVQQQAEATLANVRRQH 142

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              + L  K  V Q  L+  +R +  +  +LR                   A L+ A   
Sbjct: 143 ARTRELQGKGFVGQAALDDAQRNLDIAASQLRS------------------AQLQVATSR 184

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            + S  L   +       + L + +       I +P  GT +  ++    +  Q  + LM
Sbjct: 185 SDGSDTLL-ARTALQQAEASLHLAQARLRYTAISAPADGT-LIARNVEPGDVVQPGKVLM 242

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            + P  K   +  ++  + +  V+ G  A            ++F A +  ++P +     
Sbjct: 243 VLSPVGKTQLV-VQIDERNLAMVQLGQPA---LGAADAYPGRRFAARVAYLNPSVDPARG 298

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
           +        V++K+     +D    LR      V       T 
Sbjct: 299 S--------VVVKLD---VADPPAWLRQDMTVSVDIEVARRTA 330



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 10/167 (5%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +V +SG +     V +I S  +G +    V  G  +  G  L+  ED E    ++    
Sbjct: 46  QTVVASGRVETPLRV-DIGSQVTGTVASIPVAEGQSVKAGQLLIALEDSEARAAVEQAVA 104

Query: 102 SIKNLRCHIDTEKSAL---------DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           ++   +  +   ++                  +V  +   +RE Q   F+G+     ++ 
Sbjct: 105 AVAQAQAKLKQIRAVALPVAQQVQQQAEATLANVRRQHARTRELQGKGFVGQAALDDAQR 164

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                +S  RS ++++   RS   + L          A L   Q  L
Sbjct: 165 NLDIAASQLRSAQLQVATSRSDGSDTLLARTALQQAEASLHLAQARL 211


>gi|301169617|emb|CBW29218.1| multidrug efflux system [Haemophilus influenzae 10810]
          Length = 390

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 96/292 (32%), Gaps = 37/292 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +   T +K+      S   +L   + ++  +      L++        L+  Q +L
Sbjct: 87  DILVELDDTNAKLSFEQAKS---NLSNAVRQVEQLGFTVQQLQSAVHANEISLAQAQGNL 143

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L +  A+ +      +  V  +   L  + ++       ++ +      +  N +
Sbjct: 144 ARRVQLEKMGAIDKESFQHAKEAVELAKANLNASKNQLAANQALLSNVPLREQPQIQNAI 203

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                             + L       ++  I SPI G +                 LM
Sbjct: 204 ------------------NSLKQAWLNLQRTKIRSPIDGYVARRNV-QVGQAVSVGGALM 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +V  ++  ++ A     Q+ +++ G    + F  Y   + K+F  +I  I+        
Sbjct: 245 AVV-SNEQMWLEANFKETQLTNMRIGQPVKIHFDLYG--KNKEFDGVINGIEMGTGNAFS 301

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             P  +   N ++  +   V +K+    F++  + +  G  A       +++
Sbjct: 302 LLPSQNATGNWIKVVQRVPVRIKLDPQQFTETPLRI--GLSATAKVRISDSS 351



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 59/175 (33%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V + S  +G + K   +N  ++  G  L+  +D       +  K ++ N    ++
Sbjct: 57  VGGNQVMVSSQVAGNVAKINADNMDKVHAGDILVELDDTNAKLSFEQAKSNLSNAVRQVE 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                +  L +     E +    +  L     L K  +   + F +   +V  +      
Sbjct: 117 QLGFTVQQLQSAVHANEISLAQAQGNLARRVQLEKMGAIDKESFQHAKEAVELAKANLNA 176

Query: 170 RMRSIYLNR-----LDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
               +  N+     + L  +  +  A+ S  Q  L + +          V++ ++
Sbjct: 177 SKNQLAANQALLSNVPLREQPQIQNAINSLKQAWLNLQRTKIRSPIDGYVARRNV 231


>gi|238920964|ref|YP_002934479.1| multidrug resistance protein A [Edwardsiella ictaluri 93-146]
 gi|238870533|gb|ACR70244.1| multidrug resistance protein A [Edwardsiella ictaluri 93-146]
          Length = 392

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 85/244 (34%), Gaps = 20/244 (8%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-----QERIVYKSTLEL-R 231
           +   E   + L   +    + +   K      AVSQ  L++     Q R+    +  + R
Sbjct: 100 QQAYERAKTALANSVRQTHQLMVNAKQYQANIAVSQVALSKASNDYQRRLALSRSGAIGR 159

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E +   ++ +       D A  ++      I     + Q       +++       E+  
Sbjct: 160 EELQHAQDAMESARAALDVAIQQYNANQALILNTPLEKQPVVLQAAAQVRDAWLALERTQ 219

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +   +S         + PLM IVP     ++ A     Q+ +++ G  ATV 
Sbjct: 220 IRSPVTGYVSQ-RSVQVGAQISPNTPLMAIVPA-SQMWVDANFKETQLANMRIGQPATVV 277

Query: 352 FPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDN 401
              Y D     FK  +  +D          P  +   N ++  +   V +++     +  
Sbjct: 278 SDMYGDGV--VFKGKVAGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDPQQLAQY 335

Query: 402 NIEL 405
            + +
Sbjct: 336 PLRI 339



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 62/175 (35%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N V+I +  SG + +   E    +  G  L+T +  +     +  K ++ N      
Sbjct: 59  VTGNRVQINAQVSGSVTRVNFEGTDLVRAGDTLVTLDKTDAQQAYERAKTALANSVRQTH 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  ++ ++   +   ++  + + + + +    L   G       +     + S   +L +
Sbjct: 119 QLMVNAKQYQANIAVSQVALSKASNDYQRRLALSRSGAIGREELQHAQDAMESARAALDV 178

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
            + +  +     L+  LE +  +L+A        L + +          VSQ  +
Sbjct: 179 AIQQYNANQALILNTPLEKQPVVLQAAAQVRDAWLALERTQIRSPVTGYVSQRSV 233


>gi|326338599|gb|EGD62425.1| Multidrug resistance protein A [Escherichia coli O157:H7 str. 1044]
 gi|326342873|gb|EGD66641.1| Multidrug resistance protein A [Escherichia coli O157:H7 str. 1125]
          Length = 326

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 79/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +     +N   L+    + +  L+  Q D      L   N + +
Sbjct: 34  RQAFEKAKTALASSVRQTHQQMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 93

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 94  EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 147

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 148 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 193

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 194 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 251

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 252 VQRLPVRIELDQKQLEQYPLRI 273


>gi|295697685|ref|YP_003590923.1| secretion protein HlyD family protein [Bacillus tusciae DSM 2912]
 gi|295413287|gb|ADG07779.1| secretion protein HlyD family protein [Bacillus tusciae DSM 2912]
          Length = 218

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 11/136 (8%)

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            +   + +P +GT++              QP+  IV + K  Y+ A +    +  ++ G 
Sbjct: 85  LDNALLRAPASGTVIK-TLAKVGEVVSPGQPVALIV-NKKNLYVEANIEETNLGKIRLGE 142

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNN----LQTQEYYEV--ILKITDLAFSD 400
                   +  +R   F   +  I    +   +       +  + +V   + I       
Sbjct: 143 PVDFTVDSFPGLR---FTGRVMDIGQATNSTFSAIPALNTSGNFTKVTQRIPIKISIDDQ 199

Query: 401 NNIELRNGFPAEVLFT 416
           +  +L  G  AE+   
Sbjct: 200 HGADLSPGMSAEIRIH 215


>gi|224023792|ref|ZP_03642158.1| hypothetical protein BACCOPRO_00508 [Bacteroides coprophilus DSM
           18228]
 gi|224017014|gb|EEF75026.1| hypothetical protein BACCOPRO_00508 [Bacteroides coprophilus DSM
           18228]
          Length = 420

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 102/308 (33%), Gaps = 82/308 (26%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +  SG++     +  +    SG++ +  +E G+Q+  G  +L  ++              
Sbjct: 65  IRVSGQVQPMTTIQ-VSPLESGVVHEIFLEEGAQVKAGDKILELKN-------------- 109

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                    E   +  LN++ D+ EK    R   +                         
Sbjct: 110 ---------ENLDMQILNSEADLAEKENLLRNTLI------------------------- 135

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI- 222
                    S+   +L +  +   L   +  +++     K L+++  +++ +  + E   
Sbjct: 136 ---------SMEQEKLSVHQEMLQLETDVKRNRRAYEAQKQLYQEELIAREEYLRAEEDY 186

Query: 223 -VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            + KS LEL +N   Q ++ R+I                     ++Q Q + ++    + 
Sbjct: 187 DLAKSRLELVKNRAVQDSLYRNI--------------------QVKQMQESLSNMRVNMQ 226

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           ++ + +E   + +PI G  +                + +I  +     I A++    I  
Sbjct: 227 MIRRRKEHLILTAPIDGE-LGLLDVVLGQSVSSGMKIGQIN-NLSSYKIEAQIDEHYIDR 284

Query: 342 VKKGYTAT 349
           V  G  A 
Sbjct: 285 VMPGLEAQ 292


>gi|323131170|gb|ADX18600.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 399

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 108 QAFEKAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 167

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 168 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 220

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 221 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 267

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   TV    Y D    K+   +  +D          P  +   N ++  
Sbjct: 268 KETQLANMRIGQPVTVITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 325

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 326 QRLPVRVELDARQLEQHPLRI 346



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 66  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFEKAKTALASSVRQTH 125

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 126 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 185

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 186 AIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERT 225


>gi|312621313|ref|YP_004022926.1| secretion protein hlyd family protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201780|gb|ADQ45107.1| secretion protein HlyD family protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 533

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/390 (12%), Positives = 120/390 (30%), Gaps = 35/390 (8%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +       I S  +  +K   + +G  I +G  +   +D      +  K+   ++L   +
Sbjct: 61  IVTSEEKPIFSSTTAKVKSVFIRDGDYIKKGDLIAFMDDTSVRLELKKKEREKQSLYRDL 120

Query: 111 DTEKSALDF--LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           +   + L    + + ++        +E  ++               Y   +  R L   +
Sbjct: 121 ENLYARLGECSVYSPFEGQVAEIYVKERDIISKGSPICKVVKTDVVYLTVAFPRWLFNNI 180

Query: 169 TRMRSIYLNRLDLENKSSL-LRALLSSHQKDLTMMKN------LFEKNAVSQN------D 215
            +   I +   +   +    +RA  S    D            L EK    +        
Sbjct: 181 NQGDPIEVVVPEYGQEIKGYIRAKSSIFYTDENGFPAFDVEVILKEKGIPVKVKAYCIFR 240

Query: 216 LNQQE-RIVYKSTLELRENI------HEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            N Q+ R + +  +   E+I         KN+      L ++  L       EI   ++ 
Sbjct: 241 YNGQKVRSLNEGIITPEEDIIKSPTDGVVKNIYISKFSLLNKNQLIVELSNDEILEQIKN 300

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-VPHSKL 327
            +        ++    K      I +P+ G +             + + +  I  P +  
Sbjct: 301 KKAQIEQITEEINEYRKKLSMFVIKAPLEGIVSDINIV-EGKLLNEGEKIFVIWNPSN-- 357

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDPIISQQDNNLQTQEY 386
               +K++  ++  +KKG   T++F     I   +     ++ I     ++  +     +
Sbjct: 358 LIFESKISELELDRIKKGQKVTLQFKIPGRIGVNETVNGTVKLIGSRPLEESLDANI-SF 416

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           Y + +          +  ++ G  A     
Sbjct: 417 YSIKI-------GFKSNRIKRGMHATAQMK 439



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 9/141 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G I  E++   IKSP  G++K   +   S + +   ++   + E  + I  KK  I+ +
Sbjct: 251 EGIITPEED--IIKSPTDGVVKNIYISKFSLLNKNQLIVELSNDEILEQIKNKKAQIEQI 308

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS--VYRSL 164
              I+  +  L        V++   E     +    GK  +   K+F     S  ++ S 
Sbjct: 309 TEEINEYRKKLSMF-----VIKAPLEGIVSDINIVEGKLLNEGEKIFVIWNPSNLIFESK 363

Query: 165 KMKLTRMRSIYLNRLDLENKS 185
             +L   R     ++ L+ K 
Sbjct: 364 ISELELDRIKKGQKVTLQFKI 384


>gi|295697682|ref|YP_003590920.1| efflux transporter, RND family, MFP subunit [Bacillus tusciae DSM
           2912]
 gi|295413284|gb|ADG07776.1| efflux transporter, RND family, MFP subunit [Bacillus tusciae DSM
           2912]
          Length = 500

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 96/277 (34%), Gaps = 32/277 (11%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKD 198
             L +  ++  +       +  +  + +L + RS   N      +  +  +  L   + +
Sbjct: 90  QALARIDTSDLEHQIAQQQAALQVAEAQLNKARSDAQNGYTQANSALTQAKVALDDAKTN 149

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               KNLF+  A SQ  L+        +T+ L+         L+ +       N    + 
Sbjct: 150 YERTKNLFDAGAASQQQLDA-------ATVTLQTKQAAYDAALQQVQTAAPGGNPLNQDG 202

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           +K     + Q Q   A   S+L          T+ SP+AG +V ++      +A     +
Sbjct: 203 IKVAQAQVNQAQTALATLQSQLAEA-------TVTSPVAG-VVASRDVEPGEFAGPQSSV 254

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + I        +  +V   +I  +K G +  V+ P             + +IDP+     
Sbjct: 255 VTIA-QINPAKVTIQVPENRINDLKAGMSVKVQVPAAGM----DASGTLSRIDPVEDNTT 309

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +      Y   ++I      + +  L+ G  A+V  
Sbjct: 310 KS------YGAEVEIP-----NGDGRLKPGMVAQVTI 335


>gi|209546718|ref|YP_002278636.1| hypothetical protein Rleg2_4644 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209537962|gb|ACI57896.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 410

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/387 (13%), Positives = 134/387 (34%), Gaps = 29/387 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + LL+++ ++ L T +    ++ +V++            + SP  G I +  ++ GS + 
Sbjct: 14  LMLLTLVTVVSLPTITGFTSLDGTVNA--------RFAVVNSPIDGTIAEEPLKVGSPVK 65

Query: 80  QGTPLLTFEDIET-TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES-REEQ 137
            G  L    +      ++   +         +   K   + L+   + L    E  ++  
Sbjct: 66  AGQSLAEIRNTRVNRAILASLEADRNTALDRVAALKKEREELSALREELSGRLEVYKQTT 125

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           + +   +      KV       +   +             R+ LE+K  L + L+ + + 
Sbjct: 126 IANLEREVEILRKKVEVSQAQDLVAQVD---------LSRRMQLESKGILTQKLVEAARA 176

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                    E + ++ + L Q+   V +      +  ++     +  +E+    N +  +
Sbjct: 177 AGAATGGEVEISNLTVDQLQQRLNAVRQGIFVFGDGQNDVPYSRQREDEVVVRIN-DLNS 235

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            + E      + Q+    E ++++ LE      T ++P  G +      + SN    +  
Sbjct: 236 RIAENETRATEVQKQLVKEANRVSSLESA----TAIAPFDGVVWARSIVNGSNVVL-NDE 290

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK---FKAIIEKIDPII 374
           LM+++   +  ++   V       +     A VR    +D+ +      +     ++   
Sbjct: 291 LMRLL-DCRELFVDILVPEVNYDEIYPELVAQVRLFGRSDVFKGTVISVRGSSASVETDS 349

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDN 401
                   TQ    + +++     +D+
Sbjct: 350 FAASLPPSTQRNARIRVRLDPSFMNDD 376


>gi|307300045|ref|ZP_07579830.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           BL225C]
 gi|307316602|ref|ZP_07596045.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           AK83]
 gi|306897800|gb|EFN28543.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           AK83]
 gi|306904934|gb|EFN35517.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           BL225C]
          Length = 340

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 74/211 (35%), Gaps = 28/211 (13%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            EK AV    L+  E     S L+ R ++ +++           E N      +     D
Sbjct: 81  VEKGAV-LARLDDTEARAILSELQARLSLAQEE---YRRKLALAERNTISEQTVDRARTD 136

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           + Q +   A + ++L           + +P  G ++  Q       A+    ++  V   
Sbjct: 137 VAQLEALIAGQEARLAAY-------VLRAPSDGRVLR-QDGEIGEVAEPG-TVLFWVGEP 187

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           +   + A+V  + I  V+ G  A +R   + +      +A+++ I P             
Sbjct: 188 RPLIVEAEVNEEDIPRVEVGQNAYLRSDAFPER---ALEAVVDSITPKGDPVTKT----- 239

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            Y V L++ +      +  LR G   +V   
Sbjct: 240 -YRVRLRLPE------DTPLRIGMSTDVNVV 263



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 13/119 (10%), Positives = 37/119 (31%), Gaps = 9/119 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE----NGSQILQGTPLLTFEDIETTDLI 96
              V +SG +             +  +++  VE     G ++ +G  L   +D E   ++
Sbjct: 45  AEIVYASGVVEPRVWAKV-----TSTVRERIVEQCNCEGERVEKGAVLARLDDTEARAIL 99

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
              +  +   +     + +  +        +++A     +      G+     + V   
Sbjct: 100 SELQARLSLAQEEYRRKLALAERNTISEQTVDRARTDVAQLEALIAGQEARLAAYVLRA 158


>gi|255689994|ref|ZP_05413669.1| putative multidrug resistance protein [Bacteroides finegoldii DSM
           17565]
 gi|260624601|gb|EEX47472.1| putative multidrug resistance protein [Bacteroides finegoldii DSM
           17565]
          Length = 363

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/360 (15%), Positives = 115/360 (31%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I K       ++ +G  LL  +D E    +   + ++K+ +       + L+     
Sbjct: 75  SGYIDKIYFTEHQEVRKGDTLLVLDDREYKIRVMEAEAALKDAQAGATVINATLNTTQTT 134

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             V + +                                 ++++L ++        +L  
Sbjct: 135 ATVYDASI------------------------------AEIEVRLAKLEKDRKRYENLVE 164

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +     L     D    +                         +L     ++K  L  
Sbjct: 165 RKAATPIQLEQIVTDYEATRK------------------------KLEAVKRQKKAALSG 200

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++E+            + +S +    + T A EM++L           +++P  G  +  
Sbjct: 201 VDEV----------SYRRVSTEAAIQRATAALEMARLN-----LSYTVVVAPCDGK-LGR 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +S     +    Q +  I+P+++   + A     QI+++  G   +V     +D   K+F
Sbjct: 245 RSLEEGQFIAAGQTITYILPNTQKWIV-ANYKETQIENLSIGQEVSVTVDAISD---KEF 300

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           K  +  I           P  +   N ++ Q+   V +  TDL+  DN   L  G    V
Sbjct: 301 KGKVTSISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTDLSKEDNE-RLAAGMMVVV 359


>gi|200389011|ref|ZP_03215623.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|199606109|gb|EDZ04654.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
          Length = 390

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 99  QAFEKAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 159 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSKLEDQPAVQQTATEVRNAWL------- 211

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 212 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   TV    Y D    K+   +  +D          P  +   N ++  
Sbjct: 259 KETQLANMRIGQPVTVITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 316

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 317 QRLPVRVELDARQLEQHPLRI 337



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 53/164 (32%), Gaps = 3/164 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFEKAKTALASSVRQTH 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 117 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 176

Query: 170 RMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            ++    N+   L +K     A+  +  +       L     VS
Sbjct: 177 AIQQYNANQAMILNSKLEDQPAVQQTATEVRNAWLALERTRIVS 220


>gi|166710523|ref|ZP_02241730.1| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 362

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/330 (12%), Positives = 98/330 (29%), Gaps = 29/330 (8%)

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           +++     L   I      +     +  V + A   R + L     + ++   +  N  +
Sbjct: 51  IERTENALLHGQITVIAPQVSGYVTQVPVQDFAHVKRGQLLARIDDRIYAQQLEQANAQM 110

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            +   +L     +  S      +     S  +A     +      + L  +  VS+ D +
Sbjct: 111 QTAQANLANWEQQRHSAEATIAEQRAALSSNQAQRDRTRSAYARTQQLASQQLVSEQDRD 170

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                  ++   + +     +                     + ++ +    +   A+  
Sbjct: 171 TAFAARAQADAGVVQARAALQAA---------------EENARGVTVNRAALEAAVANAQ 215

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + + + +   +   IL+P  G +          Y      LM +VP     +I A     
Sbjct: 216 AAVRLAQINLDNTRILAPRDGQLGQLGVR-QGAYVTNGTQLMSLVP--DTLWIVANFKET 272

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI--- 390
           Q+  ++ G  A+       + R       ++ I P    +      +  T  + ++    
Sbjct: 273 QMAKIRIGQRASFTVDALDNAR---LHGRVQDISPAAGSEFSVLPADNATGNFVKIAQRI 329

Query: 391 -LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            L+I+        + LR G    V     +
Sbjct: 330 PLRISVDPDQPLALRLRPGMSVVVAVDTAS 359



 Score = 43.5 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 55/181 (30%), Gaps = 3/181 (1%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             +  I    SG + +  V++ + + +G  L   +D      ++     ++  + ++   
Sbjct: 61  GQITVIAPQVSGYVTQVPVQDFAHVKRGQLLARIDDRIYAQQLEQANAQMQTAQANLANW 120

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS--LKMKLTRM 171
           +               A  S + Q       Y  T        +S   R      +    
Sbjct: 121 EQQRHSAEATIAEQRAALSSNQAQRDRTRSAYARTQQLASQQLVSEQDRDTAFAARAQAD 180

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
             +   R  L+      R +  +       + N      ++Q +L+   RI+     +L 
Sbjct: 181 AGVVQARAALQAAEENARGVTVNRAALEAAVANAQAAVRLAQINLDNT-RILAPRDGQLG 239

Query: 232 E 232
           +
Sbjct: 240 Q 240


>gi|94970350|ref|YP_592398.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
 gi|94552400|gb|ABF42324.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
          Length = 459

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 65/240 (27%), Gaps = 39/240 (16%)

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 D    + L++   + + D + ++     S   L +           I +   +A
Sbjct: 133 YEQKNLDWQRGQGLYKDQLIPKQDYDSRKNAFEASASNLEQ-------AKIRIQQSKAQA 185

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                            +QR      ++LT       + T ++P  G +           
Sbjct: 186 ES---------------SQRRIKQNQAQLTHASDVLAKTTYVAPYDGIVTNLPVRQGEMV 230

Query: 312 A-----QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF--- 363
                      +M I     +     KV    I +VK G  A V        + K     
Sbjct: 231 VMGIQNAPGSTIMTIS-DMSVVTAEVKVDETDIVNVKLGQDAEVTIDALPKQKFKGKVTE 289

Query: 364 ---KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               AI+       SQ     Q    ++V++ +      +    LR G  A    T    
Sbjct: 290 IGDNAILRSTGVSTSQSTGGSQEARDFKVVVTLD-----NPPDTLRPGLSATAKITTATR 344



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 61/171 (35%), Gaps = 3/171 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I   V++SGEI  +  V  + +   G +    V+ G ++ +G  L   E+I+    ++
Sbjct: 41  SNIASVVTASGEIKPKTFV-NVGANAMGRLVSLPVKEGERVKKGQLLAQLENIQPEADMN 99

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  +   +      ++A+        + +  +E +        G Y      +     
Sbjct: 100 ATRAGLDVAQADAAAAEAAIKTAQAALTLAQADYEQKNLDWQRGQGLYKDQL--IPKQDY 157

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            S   + +   + +    +     + ++   +  +  +Q  LT   ++  K
Sbjct: 158 DSRKNAFEASASNLEQAKIRIQQSKAQAESSQRRIKQNQAQLTHASDVLAK 208


>gi|318040320|ref|ZP_07972276.1| membrane fusion protein [Synechococcus sp. CB0101]
          Length = 390

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 74/222 (33%), Gaps = 29/222 (13%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           ++ L++    +  +  +L  +  E +     I +          +           ++  
Sbjct: 124 EDRLDELRAQLRSAQAQLSRSQSELQRREALIRQGGISV-----DDYNSAKSTYSVDKAA 178

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--------IVPH 324
                 +L    K     T+ +P AG +V  +      +   +             IV  
Sbjct: 179 VEAARQRLDARLKEGSDLTVRAPFAG-VVTARFADPGAFVTPTTSASASAGASSSSIVEL 237

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           ++     AKV    I  +  G +A+VR   + D R     A + +I P   + +N     
Sbjct: 238 AQGLEAVAKVPESDIGRIAVGQSASVRVDAFPDRRFP---ARVRQIAPRAEKLNNVTS-- 292

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN---TTLA 423
             +EV L++ D        ELR G  A++ F        T+ 
Sbjct: 293 --FEVKLQLIDPPP-----ELRIGMTADIDFNTGTLAARTVI 327



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 1/80 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   +++SGE+     V  +     G++ K  VE G  +  G  L   +  +  D +D  
Sbjct: 72  LPGVITASGELEAFRKV-NVSPKRQGVLNKLFVEEGDSVRAGQALALMDGGDLEDRLDEL 130

Query: 100 KVSIKNLRCHIDTEKSALDF 119
           +  +++ +  +   +S L  
Sbjct: 131 RAQLRSAQAQLSRSQSELQR 150


>gi|317047488|ref|YP_004115136.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
 gi|316949105|gb|ADU68580.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
          Length = 379

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/364 (12%), Positives = 110/364 (30%), Gaps = 74/364 (20%)

Query: 8   NLKRNHPASLKRMTLLSII-GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             KR     L  + ++++I  +I    W     IE +  +      E N V I    +G 
Sbjct: 33  ERKRPGKKPLVILVIVAVIMLLIIFWFWFSNRNIETTDDA----FTEGNAVTIAPKAAGY 88

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V +  ++ +G  L+  +  +     D         +  +   ++ L     +  +
Sbjct: 89  VVNLLVRDNQRVKKGDLLVEIDPRDNVAQRD-------QAQAQLGLAQAQLHQAQAQLAL 141

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
               + ++ +Q L    K                                       +++
Sbjct: 142 SRVQYPAQRDQALADQAK--------------------------------------AQAN 163

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           LL A     ++     +                +R +  +T++LR    +  ++   +  
Sbjct: 164 LLNAQADYRRQRAVDPRA-------------TSQRNIDSATVQLRSAEAQLLSVKAQV-- 208

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              E   +    L+    ++E  Q+      ++L   E       + +P  G +      
Sbjct: 209 ---EVASQVQLQLRAQETNVEARQQQVEQAQAQLNTAELNLSYTQVRAPYDGFVTKRNVH 265

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
              +  Q    L  +V  S   +I A     Q++ +  G    +    +  ++    +  
Sbjct: 266 -IGSLVQAGTALFSLV--SPEIWITANFKESQLERMNPGDKVDISVDAWPSLK---LEGH 319

Query: 367 IEKI 370
           ++ I
Sbjct: 320 VDSI 323


>gi|148547854|ref|YP_001267956.1| secretion protein HlyD family protein [Pseudomonas putida F1]
 gi|148511912|gb|ABQ78772.1| secretion protein HlyD family protein [Pseudomonas putida F1]
          Length = 377

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/321 (12%), Positives = 96/321 (29%), Gaps = 31/321 (9%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R  +      L        V +  F    + L+    + +       +  +     +L  
Sbjct: 76  RGQVTIIGPQLSGYVVDVPVHDFQFVKAGDLLVQLDDRIYKQRLAQASAQLQQQLAALAN 135

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              + +S        +       A  +  + DL   + L    +VS+ DL          
Sbjct: 136 NQQQRKSAEATIAQRQAAIGDAAAQAAKAKADLGRNQALVNDGSVSRRDL---------- 185

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKE-ISRDLEQNQRTFADEMSKLTILEK 285
                 ++          +     A LE A   +E +  +    + +  +  + + +   
Sbjct: 186 ------DLARASEAAAVASLAQARAALEIARQDRETVVVNRAALEASVENAKAAVELARI 239

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             +   + +P  G +    +     Y      LM +VP     ++ A +   Q+ +V+ G
Sbjct: 240 DLDNTRVTAPRDGQLGQIGTR-LGAYVNSGAQLMALVP--DTLWVIANMKETQMANVRIG 296

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLA 397
              +         +    +  +++I P    +      +  T  + ++     ++IT  A
Sbjct: 297 QPVSFTVDALNHRK---LRGHVQQISPATGSEFALLQADNATGNFVKIAQRIPVRITVDA 353

Query: 398 FSDNNIELRNGFPAEVLFTAK 418
                  LR G    V    +
Sbjct: 354 DQPTARHLRPGMSVVVSIDTR 374


>gi|157148223|ref|YP_001455542.1| hypothetical protein CKO_04034 [Citrobacter koseri ATCC BAA-895]
 gi|157085428|gb|ABV15106.1| hypothetical protein CKO_04034 [Citrobacter koseri ATCC BAA-895]
          Length = 399

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 86/277 (31%), Gaps = 34/277 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 107 RQAFEKAKTALASSVRQTHQLMINSKQLQASIEVQKTALAQAQSDFNRRVPLGNANLIGR 166

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 167 EELQHARDAVASAQAQLDVAIQQYNANQAMILGSKLEDQPAVQQAATEVRNAWL------ 220

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 221 ------------ALERTKIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-LWVDAN 266

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ H++ G  ATV    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 267 FKETQLAHMRIGQPATVISDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 324

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +   V +++     + + + +  G    V     N 
Sbjct: 325 VQRLPVRIELDAQQLAQHPLRI--GLSTLVTVDTSNR 359



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 52/164 (31%), Gaps = 3/164 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + QG  L+T +  +     +  K ++ +      
Sbjct: 66  VAGNQVQIMAQVSGSVTKVWADNTDFVKQGDVLVTLDQTDARQAFEKAKTALASSVRQTH 125

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    +V + A    +      +   ++     +   +   +V  +      
Sbjct: 126 QLMINSKQLQASIEVQKTALAQAQSDFNRRVPLGNANLIGREELQHARDAVASAQAQLDV 185

Query: 170 RMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            ++    N+   L +K     A+  +  +       L     VS
Sbjct: 186 AIQQYNANQAMILGSKLEDQPAVQQAATEVRNAWLALERTKIVS 229


>gi|310820202|ref|YP_003952560.1| macrolide-specific efflux protein maca [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393274|gb|ADO70733.1| macrolide-specific efflux protein MacA [Stigmatella aurantiaca
           DW4/3-1]
          Length = 461

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 84/268 (31%), Gaps = 30/268 (11%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE---RIVYK 225
           T  R       +       +R +    +    +++ LFE    ++      E   R V  
Sbjct: 41  TAERRNLEVVAEASGLLEPIRIVEVKSKASGEVLRVLFETGQRAEQGALLAEIDPRDVQN 100

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFAN---YLKEISRDLEQNQRTFADEMSKLTI 282
           +  +   ++   +  L  +    +      A+     +E    +       A ++   T 
Sbjct: 101 ALTQAEADLESARVTLSTVTAQRERMEALRASGVVTQQEYETAINSAATARATQVRTQTN 160

Query: 283 LEKTREQK---TILSPIAGTIVYNQSFSSSNYAQQ-------SQPLMKIVPHSKLTYIRA 332
           L+  RE++   TI +PI GTI+  +S                   L  +        +RA
Sbjct: 161 LQLARERRLDVTIRAPIGGTILS-RSVEPGQIIASATSNVSGGTTLFTMA-DLSEMQVRA 218

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           K+    I  +  G  A V    Y       F   + K++P    + N         V L 
Sbjct: 219 KIDETDIGKIYAGQPARVTLEAYPGRT---FTGNVVKVEPQAVVEQN---------VTLF 266

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              +   +    L+ G  AEV     + 
Sbjct: 267 PVLIRLKNPEGLLKPGMNAEVAIEIASR 294



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 53/140 (37%), Gaps = 12/140 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E+   +SG +     +VE+KS  SG + +   E G +  QG  L   +  +  + +   
Sbjct: 47  LEVVAEASGLLEPI-RIVEVKSKASGEVLRVLFETGQRAEQGALLAEIDPRDVQNALTQA 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +++ R  + T  +  + +           E+     +    +Y +  +       + 
Sbjct: 106 EADLESARVTLSTVTAQRERM-----------EALRASGVVTQQEYETAINSAATARATQ 154

Query: 160 VYRSLKMKLTRMRSIYLNRL 179
           V     ++L R R + +   
Sbjct: 155 VRTQTNLQLARERRLDVTIR 174


>gi|307139376|ref|ZP_07498732.1| multidrug efflux system [Escherichia coli H736]
          Length = 390

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRYAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIISPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 32  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 85  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 144

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 145 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 204

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 205 EVRYAWLALERT 216


>gi|158321637|ref|YP_001514144.1| RND family efflux transporter MFP subunit [Alkaliphilus oremlandii
           OhILAs]
 gi|158141836|gb|ABW20148.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
           oremlandii OhILAs]
          Length = 409

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 98/264 (37%), Gaps = 25/264 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+   G+  S          S++            S  + +LDLE K   +   + + ++
Sbjct: 83  LVKLDGEKLSRQIAELESQRSAILAQYNEAKKPTDSRAIEKLDLEIKE--IEKRIRTAEE 140

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +   K L++  A+S  +     R +      L +   + + M + ++E           
Sbjct: 141 VVRNKKVLYDAGAISNEEYQNALRSLETEGNNLEKVKLDLELMKKPVSE----------- 189

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                   + Q +        +   LEK+ E  TI++PI GT+V        NY Q   P
Sbjct: 190 ------NTVIQYEAQLKQLDLQRQALEKSGENFTIVAPIDGTVVSKLV-EKGNYLQPGTP 242

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +M+I  +    YI + +    I  V +   A V   +     E   + ++EKI P    +
Sbjct: 243 VMEIG-NMNQLYIESDILVGDIAKVHE--NAKVVISNKDLGIE-NLEGVVEKIHPNAFSK 298

Query: 378 DNNLQTQEYYEVILKITDLAFSDN 401
            +NL  Q+   V + I      +N
Sbjct: 299 ISNLGLQQK-RVKVDIEMKEAVNN 321


>gi|209521599|ref|ZP_03270296.1| secretion protein HlyD family protein [Burkholderia sp. H160]
 gi|209497953|gb|EDZ98111.1| secretion protein HlyD family protein [Burkholderia sp. H160]
          Length = 345

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/375 (13%), Positives = 110/375 (29%), Gaps = 84/375 (22%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGE--ILNEDNVVEIKSPFSG 65
            +     A LK   +   I +IGL   +     + +           + +VV I +P  G
Sbjct: 2   KMAGKSRAPLKGRLIAGAIILIGLAA-AYFA-YDRATRFPSTDDATIDADVVHIATPVGG 59

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I +  V    ++ QG  L   + +         ++ +   R  ++  ++          
Sbjct: 60  RIVRLPVHENQRVAQGDLLFEIDPVPY-------RLIVAQTRADLELARA---------- 102

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                                                +L  +   + S   N     +++
Sbjct: 103 -------------------------------------ALDSRRKVITSERANASVAGDQA 125

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           S          +D+  +  L  K  V    L+Q +   +++ L LR+   +++   + I 
Sbjct: 126 SKAAHTYELATRDVERLAPLAAKGYVPAQQLDQAQVAQHEAELSLRQAREQKQASAQTIG 185

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                              D      T     + L + +   ++  + +P  G +     
Sbjct: 186 -------------------DDADAIATVHAREAALALAQHNLDETVVRAPHNGYVTGLLV 226

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFK 364
            +       +Q L  +V   +   + A      +  +  G  ATV    Y+ I R +   
Sbjct: 227 LA-GETVAPNQSLFTLVHADEWFAV-ANFREGALSRIAPGDCATV----YSMIDRSQPIH 280

Query: 365 AIIEKIDPIISQQDN 379
             +  I   +S  D 
Sbjct: 281 GKVVGISAGVSDTDR 295


>gi|16272836|ref|NP_439059.1| multidrug resistance protein A [Haemophilus influenzae Rd KW20]
 gi|260579989|ref|ZP_05847819.1| multidrug resistance protein A [Haemophilus influenzae RdAW]
 gi|1169523|sp|P44928|EMRA_HAEIN RecName: Full=Multidrug resistance protein A homolog
 gi|1573917|gb|AAC22558.1| multidrug resistance protein A (emrA) [Haemophilus influenzae Rd
           KW20]
 gi|260093273|gb|EEW77206.1| multidrug resistance protein A [Haemophilus influenzae RdAW]
          Length = 390

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 95/292 (32%), Gaps = 37/292 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +   T +K+      S   +L   + ++  +      L++        L+  Q +L
Sbjct: 87  DILVELDDTNAKLSFEQAKS---NLANAVRQVEQLGFTVQQLQSAVHANEISLAQAQGNL 143

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L +  A+ +      +  V  +   L  + ++       +  +      +  N +
Sbjct: 144 ARRVQLEKMGAIDKESFQHAKEAVELAKANLNASKNQLAANQALLRNVPLREQPQIQNAI 203

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                             + L       ++  I SPI G +                 LM
Sbjct: 204 ------------------NSLKQAWLNLQRTKIRSPIDGYVARRNV-QVGQAVSVGGALM 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +V  ++  ++ A     Q+ +++ G    + F  Y   + K+F  +I  I+        
Sbjct: 245 AVV-SNEQMWLEANFKETQLTNMRIGQPVKIHFDLYG--KNKEFDGVINGIEMGTGNAFS 301

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             P  +   N ++  +   V +K+    F++  + +  G  A       +++
Sbjct: 302 LLPSQNATGNWIKVVQRVPVRIKLDPQQFTETPLRI--GLSATAKVRISDSS 351



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 59/175 (33%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V + S  +G + K   +N  ++  G  L+  +D       +  K ++ N    ++
Sbjct: 57  VGGNQVMVSSQVAGNVAKINADNMDKVHAGDILVELDDTNAKLSFEQAKSNLANAVRQVE 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                +  L +     E +    +  L     L K  +   + F +   +V  +      
Sbjct: 117 QLGFTVQQLQSAVHANEISLAQAQGNLARRVQLEKMGAIDKESFQHAKEAVELAKANLNA 176

Query: 170 RMRSIYLNRLDLEN-----KSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
               +  N+  L N     +  +  A+ S  Q  L + +          V++ ++
Sbjct: 177 SKNQLAANQALLRNVPLREQPQIQNAINSLKQAWLNLQRTKIRSPIDGYVARRNV 231


>gi|86132021|ref|ZP_01050617.1| efflux transporter, RND family, MFP subunit [Dokdonia donghaensis
           MED134]
 gi|85817355|gb|EAQ38535.1| efflux transporter, RND family, MFP subunit [Dokdonia donghaensis
           MED134]
          Length = 426

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 78/263 (29%), Gaps = 53/263 (20%)

Query: 171 MRSIYLNRLDLENKSSLL---RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              +  ++  L+N  + L    A L+  +      K LF+K  +S+ D  + E     + 
Sbjct: 100 QAQVSQSQAALQNSRAGLSQAEATLNQAKLTFERNKPLFDKGVISKADFERAESDYQIAQ 159

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              +   +  +++   + +                                         
Sbjct: 160 ANRQSAFYNVQSVAAQVKQ------------------------------------ATDNL 183

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPL-MKIVPHS--KLTYIRAKVTPKQIQHVKK 344
            + +I +P  GTI              +Q    +IV  +  +   +   V    I  ++ 
Sbjct: 184 GRTSIFAPRDGTISMLNVELGERVVGTAQMAGTEIVRVANLQNMEVEVDVNENDIVKIQV 243

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD-------LA 397
           G +  V    Y    +KKF  ++ +I    +Q          ++V ++I +         
Sbjct: 244 GDSTIVEVDAY---LKKKFAGVVTEI-ANSAQATLTADQVTNFKVKVRILEESYKDLLEG 299

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
             D     R G  A V    K  
Sbjct: 300 KKDTYSPFRPGMTATVDIITKKR 322



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 64/194 (32%), Gaps = 2/194 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  +V+++G+I  E  V  + S  SG I    ++ G  + +G  L+          + 
Sbjct: 46  ATIIETVAATGKIQPEIEVK-LSSEVSGEIIDLPIKEGQDVKKGDLLVKINPDLVQAQVS 104

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + +++N R  +   ++ L+     ++  +  F+       DF            N   
Sbjct: 105 QSQAALQNSRAGLSQAEATLNQAKLTFERNKPLFDKGVISKADFERAESDYQIAQANRQS 164

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +           +  +  L R  +   +   +  L     + +     +     V   +L
Sbjct: 165 AFYNVQSVAAQVKQATDNLGRTSIFAPRDGTISMLNVELGERVVGTAQMAGTEIVRVANL 224

Query: 217 NQQERIVYKSTLEL 230
              E  V  +  ++
Sbjct: 225 QNMEVEVDVNENDI 238


>gi|325914042|ref|ZP_08176398.1| membrane fusion protein [Xanthomonas vesicatoria ATCC 35937]
 gi|325539811|gb|EGD11451.1| membrane fusion protein [Xanthomonas vesicatoria ATCC 35937]
          Length = 345

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 55/175 (31%), Gaps = 12/175 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             L  +   V      ++++       +    +L  E      ++       + +     
Sbjct: 89  TRLASERAQVAAEIAAIQQSRAVASIDVERSRQLLAEGLAGRRDFEL-TQIKVAEADAKL 147

Query: 274 ADEMSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           A+  +KLT ++    +++   + +P  G +    + S S        L  I P      +
Sbjct: 148 AESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAV 207

Query: 331 RAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQ 377
              +  + +  ++ G            ++F  +  +    F   +  IDP  +  
Sbjct: 208 ELYIDGRDVPLIRPGRPVRLEFEGWPAIQFSGWPSVAHGMFDGRVRAIDPNAAPD 262



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 71/187 (37%), Gaps = 13/187 (6%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKF 70
           P+  K +  + +IG+          P   + S  G+++     D   ++ +   G ++++
Sbjct: 4   PSIAKALAWMLLIGVAIAGAILAFAPWVQTASGKGQVVSLDPGDRQQQVTAFVPGRVERW 63

Query: 71  QVENGSQILQGTPLLTFEDIE---------TTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
            V +G  + +G P+    D++             +  +  +I+  R     +      L 
Sbjct: 64  YVHDGQHVSKGDPIARVGDLDPDLLTRLASERAQVAAEIAAIQQSRAVASIDVERSRQLL 123

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +     + FE  + ++ +   K   + +K+    I  + R     +   R   + +L+ 
Sbjct: 124 AEGLAGRRDFELTQIKVAEADAKLAESRAKLTRIDI-QLNRQSAQLVRAPRDGRVQQLNA 182

Query: 182 ENKSSLL 188
            + S+++
Sbjct: 183 ASGSAMV 189


>gi|224824883|ref|ZP_03697989.1| secretion protein HlyD family protein [Lutiella nitroferrum 2002]
 gi|224602554|gb|EEG08731.1| secretion protein HlyD family protein [Lutiella nitroferrum 2002]
          Length = 377

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 93/322 (28%), Gaps = 25/322 (7%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E++   +L      +         Q+L    +       +     +     +     ++ 
Sbjct: 58  EETDNAYLAGHVSTISPRIAGVVHQVLVSDNQLVRAGDPLLELDAADQEVKIAQIKAQIA 117

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ----QERIVYKSTL 228
                   +  +    RA   + Q  +      F++N      ++     Q + V KS L
Sbjct: 118 QTDEQVRQIAEQLEQARAEAQAAQALVARAAAQFQRNDAEAKRVSALHDVQLKSVSKSEL 177

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E      +         +   +A    +  +          ++  A   ++L   E   +
Sbjct: 178 EGAIAARDSAAAEAQAQQFQAKAASAKSGSVAAARAAALAQKKVLA---AQLRDAELQLK 234

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              I++P+ G I   +S       Q  Q L+ IV      ++ A     Q+  +  G  A
Sbjct: 235 YTRIVAPVDGRI-GKKSVEVGTRVQAGQQLLAIV--QDGVWVNANFKETQLHDLYPGQQA 291

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAF 398
           TVR   +       F   ++   P    Q      +  T  + +      V + +     
Sbjct: 292 TVRIDAFPGRT---FSGKVDSFAPASGAQFALLPPDNATGNFTKIVQRIPVKVLLDPNDV 348

Query: 399 SDNNIELRNGFPA--EVLFTAK 418
                 L  G  A  EV     
Sbjct: 349 KAMGGRLAPGMSAFVEVDLRQG 370



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 57/207 (27%), Gaps = 5/207 (2%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL--RCHI 110
             +V  I    +G++ +  V +   +  G PLL  +  +    I   K  I     +   
Sbjct: 66  AGHVSTISPRIAGVVHQVLVSDNQLVRAGDPLLELDAADQEVKIAQIKAQIAQTDEQVRQ 125

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             E+        +      A  + + Q  D   K  S    V    + SV +S       
Sbjct: 126 IAEQLEQARAEAQAAQALVARAAAQFQRNDAEAKRVSALHDV---QLKSVSKSELEGAIA 182

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            R         +   +   +  S             +K   +Q    + +    +    +
Sbjct: 183 ARDSAAAEAQAQQFQAKAASAKSGSVAAARAAALAQKKVLAAQLRDAELQLKYTRIVAPV 242

Query: 231 RENIHEQKNMLRHINELYDEANLEFAN 257
              I ++   +    +   +      +
Sbjct: 243 DGRIGKKSVEVGTRVQAGQQLLAIVQD 269


>gi|312878830|ref|ZP_07738630.1| efflux transporter, RND family, MFP subunit [Aminomonas paucivorans
           DSM 12260]
 gi|310782121|gb|EFQ22519.1| efflux transporter, RND family, MFP subunit [Aminomonas paucivorans
           DSM 12260]
          Length = 417

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 16/219 (7%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLEFANYL-KEI 262
           L  + A S+ DL      +  +  +L   + + Q+    + +    +++L+ A       
Sbjct: 106 LAAEVAKSEADLASARADLASARADLANADRNRQRQERLYASHFVAKSDLDDARTSWLTA 165

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMK 320
           +  ++ ++       + L           I+SPI GT+V          A   Q   L  
Sbjct: 166 AAKVDASRAGVRQAEAVLRRGRANLGYTRIVSPIDGTVVGKSISEGQTVAASYQTPTLFT 225

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +        + A V    I  +++G   T     + D     F+  + ++      Q+N 
Sbjct: 226 LAEDLTRMQVEADVDEADIGPIREGMPVTFTVDAFPDDT---FRGRVSQVRLQAKTQENV 282

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +              +   + ++ L+ G  A V      
Sbjct: 283 VTYT---------VVVRVDNPDLTLKPGMTANVAIRVAE 312



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 58/176 (32%), Gaps = 21/176 (11%)

Query: 25  IIGIIGLITWSILLP--------IEISVSSSGEILNED---------NVVEIKSPFSGII 67
           ++G +    W             +  +V + GE++            N V + S  SG I
Sbjct: 23  VLGTLAAGGWWFFGRETKPPVAYLSEAV-ARGEVVQSVSATGTLQAVNTVTVGSQVSGTI 81

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V+  S++ +G  L   +       +   +  + + R  + + ++ L   +      
Sbjct: 82  SRVLVDYNSRVRKGQLLALIDPTMLAAEVAKSEADLASARADLASARADLANADRNRQRQ 141

Query: 128 EKAFES---REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           E+ + S    +  L D    + +  +KV             ++  R    Y   + 
Sbjct: 142 ERLYASHFVAKSDLDDARTSWLTAAAKVDASRAGVRQAEAVLRRGRANLGYTRIVS 197


>gi|260462212|ref|ZP_05810456.1| efflux transporter, RND family, MFP subunit [Mesorhizobium
           opportunistum WSM2075]
 gi|259032072|gb|EEW33339.1| efflux transporter, RND family, MFP subunit [Mesorhizobium
           opportunistum WSM2075]
          Length = 430

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 103/290 (35%), Gaps = 28/290 (9%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIY-LNRLDLENKSSLLRALLSSHQKDLTMMK 203
           Y  T +K+    + +    L ++++   ++  L ++D+ ++ S +   +S ++       
Sbjct: 55  YAGTPAKIDYTTVPAAKADLTVQVSATGTLQPLTQVDISSQLSGIIRSVSVNENQQVKKG 114

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTL------ELRENIHEQKNMLRHINELYDE-----AN 252
           ++      ++  + Q ER    +        + R  + E ++ L     L         +
Sbjct: 115 DVLAALDTAKLQV-QIERAEAAAKAAAANVEDARVTLAENESALVRAAALTKRGMATDQS 173

Query: 253 LEFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           LE A   ++ S   L+  +   A   + L   +      TI +PI G ++          
Sbjct: 174 LEAATATRDRSKAALDSAEANLAIANADLKSQQTDLANSTIYAPIDGIVLTRSVDPGQTV 233

Query: 312 AQQSQ-PLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           A   Q P++ I+    +   + A V    I  VK G  A      + D     F A I  
Sbjct: 234 ASSLQAPVLFIIAADLRNMELVAAVDEADIGAVKPGQHARFTVDAFPDR---PFDAEIRD 290

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           I       D  +     Y   L++      +N + LR G  A V    + 
Sbjct: 291 ISYASITTDGVVT----YNARLEVD-----NNELLLRPGMTATVSVVTRQ 331



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 53/146 (36%), Gaps = 3/146 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + VS++G +     V +I S  SGII+   V    Q+ +G  L   +      
Sbjct: 69  AAKADLTVQVSATGTLQPLTQV-DISSQLSGIIRSVSVNENQQVKKGDVLAALDT--AKL 125

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + +++          + E + +    N+  ++  A  ++     D   +  +       
Sbjct: 126 QVQIERAEAAAKAAAANVEDARVTLAENESALVRAAALTKRGMATDQSLEAATATRDRSK 185

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLD 180
             + S   +L +    ++S   +  +
Sbjct: 186 AALDSAEANLAIANADLKSQQTDLAN 211


>gi|187940041|gb|ACD39175.1| membrane fusion protein PltI [Pseudomonas aeruginosa]
          Length = 336

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 104/310 (33%), Gaps = 15/310 (4%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           D+E +   + N     +  AFE+ E  +     +     +      + +    L+++  R
Sbjct: 28  DSEDALKLYGNVDIRQVSLAFENSERIVALHAEEGDKVRAGQVLAELDTRTLRLRIETAR 87

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            R     ++ L  ++      +   +  L   +   E   +    L +         +  
Sbjct: 88  ARIGVQEQVLLRLRNGTRPQEVDQSRARLQAAQAEAELARLELVRLQRIAGGTDGKGVSR 147

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +        +     E+ ++        +     D+ Q Q       + L +LE    Q 
Sbjct: 148 QSLDAAAARLKVARAEVENQRKAWQLADIGPRDEDIAQAQAELEVARADLRLLEHYLSQA 207

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P   T+   +     + A  S+P+  +   +   ++RA V  +Q+  V  G  A V
Sbjct: 208 QLKAPRDATV-RTRLLEPGDMASPSRPVFALA-LTDPKWVRAYVNERQLGRVHPGQKARV 265

Query: 351 RFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
                  + E+     +  I  +      + +  +L+T   YE+ + + D         L
Sbjct: 266 ---VTDSVPERPVDGRVGYISSVAEFTPKTVETEDLRTSLVYEIRVLLDDPED-----RL 317

Query: 406 RNGFPAEVLF 415
           R G PA V  
Sbjct: 318 RLGMPATVYL 327


>gi|325496265|gb|EGC94124.1| multidrug efflux system [Escherichia fergusonii ECD227]
          Length = 347

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 55  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 114

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 115 EELQHARDAVISAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 168

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 169 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 214

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 215 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 272

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 273 VQRLPVRIELDQKQLEQYPLRI 294



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 51/164 (31%), Gaps = 3/164 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N ++I S  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 14  VAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFEKAKTALASSVRQTH 73

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    +V + A    +      +   ++     +   +   +V  +      
Sbjct: 74  QLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVISAQAQLDV 133

Query: 170 RMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            ++    N+   L  K     A+  +  +       L     VS
Sbjct: 134 AIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRIVS 177


>gi|237729643|ref|ZP_04560124.1| multidrug resistance secretion protein [Citrobacter sp. 30_2]
 gi|226908249|gb|EEH94167.1| multidrug resistance secretion protein [Citrobacter sp. 30_2]
          Length = 394

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 86/276 (31%), Gaps = 34/276 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q D      L   N + + 
Sbjct: 103 QAFEKAKTALASSVRQTHQLMINSKQLQASIEVQKTALAQAQSDFNRRVPLGNANLIGRE 162

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 163 ELQHARDAVASAQAQLDVAIQQYNANQAMILGSKLEDQPAVQQAATEVRNAWL------- 215

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 216 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-LWVDANF 262

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ H++ G  ATV    Y D    K+   +  +D          P  +   N ++  
Sbjct: 263 KETQLAHMRIGQPATVISDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 320

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +   V +++     + + + +  G    V     N 
Sbjct: 321 QRLPVRIELDAQQLAQHPLRI--GLSTLVTVDTSNR 354



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 50/160 (31%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK------- 104
              N V+I +  SG + K   +N   + QG  L+T +  +     +  K ++        
Sbjct: 61  VAGNQVQIMAQVSGSVTKVWADNTDFVKQGDVLVTLDQTDAKQAFEKAKTALASSVRQTH 120

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    +++++         +  F  R       L               +     +
Sbjct: 121 QLMINSKQLQASIEVQKTALAQAQSDFNRRVPLGNANLIGREELQHARDAVASAQAQLDV 180

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            ++        +    LE++ ++ +A        L + + 
Sbjct: 181 AIQQYNANQAMILGSKLEDQPAVQQAATEVRNAWLALERT 220


>gi|37525243|ref|NP_928587.1| multidrug resistant protein A [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784670|emb|CAE13570.1| multidrug resistant protein A [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 394

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 76/261 (29%), Gaps = 23/261 (8%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +     +     +L   + +     +N    +   +L R+ L+  Q DL+  + L  + 
Sbjct: 97  PRDAELALEKAKTTLANSVRQTHQQIVNSKQYQANIALRRSELTKVQNDLSRREILSVQK 156

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + + +L   +  V  +   L   I +       + +   E          E+       
Sbjct: 157 VIGKEELQHAQEAVASARAALDIAIEQYNANQAIVLDTPLEKQPAIEQAATEVRNAWL-- 214

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                             ++  I+SPI G +   +S        ++ PLM IV  +   +
Sbjct: 215 ----------------ALQRTKIVSPIDGYVSR-RSVQVGAQINKNTPLMAIVSAND-MW 256

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIR--EKKFKAI-IEKIDPIISQQDNNLQTQEY 386
           I A     QI  ++ G    +    Y   +    K   + +            N      
Sbjct: 257 IEANFKETQISGMRIGQPVEITSDFYGGSKVFSGKITGLDMGTGSAFSLLPAQNASGNWI 316

Query: 387 YEVILKITDLAFSDNNIELRN 407
             V      +  +   +E   
Sbjct: 317 KVVQRLPVRIELNPGQLEKYP 337



 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 73/202 (36%), Gaps = 10/202 (4%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           ++   A +    + +++G+     W ++L                N V+I S  +G +  
Sbjct: 21  RQRSRALVLLTLIFTLLGVAYFFYWFLILRHHQETD---NAYVTGNQVQIMSQVAGSVIT 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-----IDTEKSALDFLNNKY 124
              +N   +  G+ L+  +  +    ++  K ++ N         +++++   +    + 
Sbjct: 78  VNFDNTDFVKSGSILVQLDPRDAELALEKAKTTLANSVRQTHQQIVNSKQYQANIALRRS 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LE 182
           ++ +   +    ++L           +     ++S   +L + + +  +     LD  LE
Sbjct: 138 ELTKVQNDLSRREILSVQKVIGKEELQHAQEAVASARAALDIAIEQYNANQAIVLDTPLE 197

Query: 183 NKSSLLRALLSSHQKDLTMMKN 204
            + ++ +A        L + + 
Sbjct: 198 KQPAIEQAATEVRNAWLALQRT 219


>gi|330901996|gb|EGH33321.1| secretion protein HlyD [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 334

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/388 (11%), Positives = 112/388 (28%), Gaps = 87/388 (22%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PIE + ++      +     I    SG + +  V++   +  G  L+  +D        
Sbjct: 20  SPIESTENAQ----VKGQTTLIGPQLSGYVYEVPVQDFQFVKAGDLLVRLDD-------R 68

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + +  +      +  +K++L     +    E     R+ +L + + +   + +       
Sbjct: 69  IYRQRLDQAIAQLAVQKASLANNLQQRRSAEATIGQRQAELQNSIAQSRKSAA------- 121

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                                                   DL   + L    +VS+++L 
Sbjct: 122 ----------------------------------------DLRRNQALVTDGSVSKSEL- 140

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                V ++          +   +  I              L+ +  +    + + A+  
Sbjct: 141 ----DVTRAADAQANAAVAEARAVLQIA----------REDLQTVIVNRGSLEASVANAQ 186

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + + +     +   I++P  G +          Y      LM +VP  +     A +   
Sbjct: 187 AAIELARIDLDNTRIVAPRDGQLGQIGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKET 243

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKI 393
           Q+ +V+ G   +            +    +++I P    +      +  T  + ++  +I
Sbjct: 244 QMANVRLGQPVSFTVDALDGH---EMHGHVQRISPAAGSEFSLLPADNATGNFVKISQRI 300

Query: 394 TDLAFSDNNIE----LRNGFPAEVLFTA 417
                 D +      LR G    V    
Sbjct: 301 PVRIVVDADQPMLEHLRPGMSVVVSIDT 328


>gi|293405822|ref|ZP_06649814.1| conserved hypothetical protein [Escherichia coli FVEC1412]
 gi|291428030|gb|EFF01057.1| conserved hypothetical protein [Escherichia coli FVEC1412]
          Length = 391

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLVLKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLVLKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|170720059|ref|YP_001747747.1| secretion protein HlyD family protein [Pseudomonas putida W619]
 gi|169758062|gb|ACA71378.1| secretion protein HlyD family protein [Pseudomonas putida W619]
          Length = 353

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 67/217 (30%), Gaps = 17/217 (7%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + L QQ     ++  + R  + + +  L +       A  +       +S  +       
Sbjct: 138 SRLAQQGAGTVQNAQQARSRVDQARARLANTQAALVAARKQVDI----LSAQVASADGQL 193

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               + L   +       I +P+ G +   ++     +      L+ +VP      +   
Sbjct: 194 KRAEAGLEKAQLDLSYTRITAPVDGMV-GERALRVGAFVNPGARLLSVVPLQHAYVV-GN 251

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEV 389
               Q+ HV+ G   ++    ++       K  ++ I P      +    +  T  + +V
Sbjct: 252 FQETQLTHVQPGQPVSISVDTFSGET---LKGHVQSIAPATGVTFAAVKPDNATGNFTKV 308

Query: 390 ILKITDLAFSDNNIELRN----GFPAEVLFTAKNTTL 422
           + +I      D+   L      G   E     +  T 
Sbjct: 309 VQRIPVKIVFDDGQPLLARLRVGMSVEATIDTRGDTF 345



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 59/166 (35%), Gaps = 12/166 (7%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K+  VE+  Q+  G  L T +  +    +D  +  +   +      ++ L+      
Sbjct: 54  GFVKQVLVEDNQQVQAGQLLATIDARDYQAALDAAQAQLLVAQAQSADARATLE------ 107

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               +A    + +      +  ++ +       S + +     +   +           +
Sbjct: 108 ---RQAALIAQAEAAVKAAQAEASFADHEVNRYSRLAQQGAGTVQNAQQARSRVDQARAR 164

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            +  +A L + +K + +   L  + A +   L + E  + K+ L+L
Sbjct: 165 LANTQAALVAARKQVDI---LSAQVASADGQLKRAEAGLEKAQLDL 207


>gi|74312916|ref|YP_311335.1| multidrug resistance protein K [Shigella sonnei Ss046]
 gi|73856393|gb|AAZ89100.1| multidrug resistance protein K [Shigella sonnei Ss046]
          Length = 387

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIRSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339


>gi|223935050|ref|ZP_03626969.1| secretion protein HlyD family protein [bacterium Ellin514]
 gi|223896503|gb|EEF62945.1| secretion protein HlyD family protein [bacterium Ellin514]
          Length = 389

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/367 (11%), Positives = 108/367 (29%), Gaps = 70/367 (19%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V ++     G +K+  V+    +  G  L+  + +E                    
Sbjct: 73  VAGHVHQVSPEVDGRVKEVLVKENQTVKAGDVLVRLDPLEY------------------- 113

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                           E   +  E  L     +     + V   G   +           
Sbjct: 114 ----------------EIGLQKAEANLAQASAQALQAKAAVSQAGAQLLEAQSHAVQAE- 156

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                    +   S+ L     + +++L +  +     A+S++D++     +  +     
Sbjct: 157 -------AQVRQTSAQLELAGHNQERNLQLQTS---NGAISKSDVDATHSALDSAQAAAD 206

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                   +   +     +     A  +          +   A + + +   ++      
Sbjct: 207 AATANLNAIKAGVTAAQAQRESAEAMEVA--------AKAAIAADEAAVREAKRKLSYTA 258

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I++P  G I  N++    N  Q  Q L  +V      +I A     Q+  +  G +  + 
Sbjct: 259 IVAPADGRI-GNKNVEPGNRVQSGQTLFAMV--EPEVWIVANFKETQLAKMHAGQSVDIS 315

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIE-- 404
                 +  K F  +++ + P    Q      +  T  + +V+ ++   ++F   ++   
Sbjct: 316 IDA---VPGKTFHGVLDSLAPASGAQFALLPPDNATGNFTKVVQRVPVRISFEQGSVREL 372

Query: 405 ---LRNG 408
              LR G
Sbjct: 373 MDQLRPG 379


>gi|237751378|ref|ZP_04581858.1| HlyD family secretion protein [Helicobacter bilis ATCC 43879]
 gi|229372744|gb|EEO23135.1| HlyD family secretion protein [Helicobacter bilis ATCC 43879]
          Length = 416

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 87/249 (34%), Gaps = 23/249 (9%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           IY   +D+ +     + L   +   L   K    +   +Q           K  LE ++ 
Sbjct: 84  IYKLYVDVNDSVRKNQILAEINPNKLNQTK----EGYEAQLQSALANLEASKVALEQKKW 139

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKE---ISRDLEQNQRTFADEMSKLTILEKTREQK 290
            +EQ+  L         + LE  N   +      D++  Q + A   + L   +   +  
Sbjct: 140 NYEQQQQLYEATGGKTPSKLELQNAKMDYLSAKADIKIKQASIAQIQTNLKSAKIDLQNA 199

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            I SPI G I+  +S S       S     L K+  + K   +   ++   I  V+    
Sbjct: 200 IIKSPIDGIILE-RSISLGQTVAASFQTPTLFKLAQNLKEMNLVVNISESDIGKVQSDQE 258

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            +     Y +     FKA +++++   +  DN       YE  + +     ++ N+ L+ 
Sbjct: 259 VSFSVDAYPNQT---FKAKVDRVNFAATTTDNITS----YETTIYV-----NNENLLLKP 306

Query: 408 GFPAEVLFT 416
           G  A     
Sbjct: 307 GMNATAFIQ 315



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 68/165 (41%), Gaps = 10/165 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SVS++G +    N VEI S  SG I K  V+    + +   L      +     +  
Sbjct: 58  ITQSVSATGTLSP-TNEVEIGSQISGTIYKLYVDVNDSVRKNQILAEINPNKLNQTKEGY 116

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +++   +++  K AL+     Y+        +++QL +  G    +  ++ N  +  
Sbjct: 117 EAQLQSALANLEASKVALEQKKWNYE--------QQQQLYEATGGKTPSKLELQNAKMDY 168

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           +     +K+ +  SI   + +L++    L+  +     D  +++ 
Sbjct: 169 LSAKADIKIKQA-SIAQIQTNLKSAKIDLQNAIIKSPIDGIILER 212


>gi|227358557|ref|ZP_03842882.1| MFP family membrane fusion protein [Proteus mirabilis ATCC 29906]
 gi|227161268|gb|EEI46342.1| MFP family membrane fusion protein [Proteus mirabilis ATCC 29906]
          Length = 391

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 81/270 (30%), Gaps = 30/270 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +M    +N   L+    L    L+  Q DL   + L E+N + + +
Sbjct: 101 ALNKAKTALANSVRQMHQQIINGRQLKANIVLRETELAKLQNDLRRREVLGERNVIGKEE 160

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      V  +   L     +       I                E+             
Sbjct: 161 LQHAREAVATAKAALDVAKEQYNANQAIILTTPIAQQPSVLQAATEVRNAWL-------- 212

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  ILSP  G +   +S          +PLM +VP +   +I A   
Sbjct: 213 ----------ALQRTKILSPAEGYVSR-RSVQVGAQVAPGKPLMAVVPVTG-MWIDANFK 260

Query: 336 PKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----EYY 387
             Q+ +++ G  A +    Y    I   + + + +            N         +  
Sbjct: 261 ETQLANMRIGQPAKITTDFYGKKVIYHGRVQGLDMGTGSAFSLLPAQNASGNWIKVVQRL 320

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            V + + +   ++  + +  G   EV    
Sbjct: 321 PVRISLDEKEVAEKPLRI--GLSTEVTVDT 348



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 62/175 (35%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-- 109
              N + +    SG +    V+N   +  G PL+  +D +    ++  K ++ N      
Sbjct: 58  VTGNQIMVMPQISGSVTTVYVDNTDYVKAGEPLVQLDDSDEILALNKAKTALANSVRQMH 117

Query: 110 ---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              I+  +   + +  + ++ +   + R  ++L           +     +++   +L +
Sbjct: 118 QQIINGRQLKANIVLRETELAKLQNDLRRREVLGERNVIGKEELQHAREAVATAKAALDV 177

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLF---EKNAVSQNDL 216
              +  +     L   +  + S+L+A        L + +       +  VS+  +
Sbjct: 178 AKEQYNANQAIILTTPIAQQPSVLQAATEVRNAWLALQRTKILSPAEGYVSRRSV 232


>gi|90407718|ref|ZP_01215897.1| putative multidrug resistance protein [Psychromonas sp. CNPT3]
 gi|90311187|gb|EAS39293.1| putative multidrug resistance protein [Psychromonas sp. CNPT3]
          Length = 376

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 100/295 (33%), Gaps = 30/295 (10%)

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             S E Q +          +        +   ++++ L ++ S YL    L  + S  + 
Sbjct: 61  ITSDETQTVQQGTTLILLSNNEILIATQAAEANVEIALRQVNSNYLKIDKLSAQISAEKI 120

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            LS   +D        +   V    L   ++ V  +   LR           H+    D+
Sbjct: 121 KLSQVTQDYKRRIGGDKDGTVLPEVLMHAKKSVAITKANLRAL---------HMQLAADK 171

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           A L   N L+     L          +S+L  +   +E  +I++PI+G I    ++    
Sbjct: 172 ALLPAINKLQTPQVQLA---------ISQLRKIYLAKENASIVAPISGVIANKSAY-IGQ 221

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +  QPLM IVP     +I A     Q+++++ G +  +    Y    E  +  I+  I
Sbjct: 222 QIKPGQPLMTIVPLHN-LWIEANFKETQLKNIRPGQSVNISSDLYG--EEHNYNGIVVGI 278

Query: 371 --------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                     I +Q       +    + ++I           LR G   +V    
Sbjct: 279 HAGTGNVFSAIPAQNATGNWIKIIQRIPVRIYINPSQLKAFPLRIGMSMKVTVKT 333


>gi|171915091|ref|ZP_02930561.1| hypothetical protein VspiD_27980 [Verrucomicrobium spinosum DSM
           4136]
          Length = 612

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/342 (13%), Positives = 108/342 (31%), Gaps = 39/342 (11%)

Query: 104 KNLRCHIDTEKS---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           + L   +D EK+   + D L  K   ++    S+E              S          
Sbjct: 179 RTLNLELDAEKADKASEDPLAEKEGKVDPLKASQEVADATTPAPPAPASSDDEAVKPLDF 238

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              L                L N+  L ++ L+  ++++   + L  K  +++  L   +
Sbjct: 239 LSFLNQTEMGDGEAEQKLRQLSNELLLHKSELALAKQNVEASERLAAKEFITKTTLENDQ 298

Query: 221 RIVYKSTLELRENIHEQ--------KNMLRHINELYDEANLEFANYLK-------EISRD 265
               K+ L ++    +                   Y EA  +    L+       ++   
Sbjct: 299 VNFEKTKLAVQTAETQLDLFKKYEFPKQAEVALSAYQEALKKLQRTLRANRSRMAQVETK 358

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY-----------NQSFSSSNYAQQ 314
               +R +  E+S+   L++  +   I +P+ G + Y           N         + 
Sbjct: 359 YRTAKRRYEVELSRKEELDRQLKACVIKAPVPGLVAYGSHSGNNGIRSNDVIEEGAAVRF 418

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            Q L+ I P+     +   +   Q++ V+ G    V        + +  + ++ ++  + 
Sbjct: 419 RQTLLTI-PNMSRMGVAVNIHESQLKKVRIGQHCRVTVDA---EQGRTLEGVVAELAVLP 474

Query: 375 SQQDNNLQTQ-EYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               +      + Y  ++ I        +  L+ G  A+V  
Sbjct: 475 DSGSSRYTPNLKVYPAVVHID-----GTHDWLKPGMNAKVEI 511


>gi|59713650|ref|YP_206425.1| permease [Vibrio fischeri ES114]
 gi|59481898|gb|AAW87537.1| hypothetical permease [Vibrio fischeri ES114]
          Length = 348

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 52/293 (17%), Positives = 91/293 (31%), Gaps = 33/293 (11%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           DV +  F   ++ L++          +     +  +Y+    K+T     Y++ +     
Sbjct: 85  DVKDSEFVLEDQLLMELDAPILEQEIEFIENELEQLYQEQTQKITEDFGPYISAIGAA-- 142

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +  L    K         ++  VSQ D      I   +   L              
Sbjct: 143 ----KLNLKKITKIKVNYDQYAKEGKVSQVDYAAIVGIYNTAQNNL-------------T 185

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N        E A   + ++  + Q  R        LT  +   +  +I +P  G ++   
Sbjct: 186 NAYIALNQAEIAQKQRLLAGGVAQVTRELN---QALTTKKNQLDALSIRAPYMGLVIDIN 242

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +           PL+ + P      I   + PK I+  K G   TV+ P       KK +
Sbjct: 243 AL-KGQQISIGDPLVTVSPDVAPYVIS-YLDPKHIEKAKLGALVTVKLP-----NGKKVE 295

Query: 365 AIIEKIDPIISQ---QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           A +     + S+   Q           + +KIT L       E   G P EV 
Sbjct: 296 ARVSSAIGLTSKLPIQLAKPFEGAKALLKVKITFLGGVLEK-EWVEGMPVEVY 347



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 69/200 (34%), Gaps = 6/200 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
             ++   KR        + L  I+  I  + +       +   + G I      V I + 
Sbjct: 20  KVLYGMEKRGAYRFRWYLILAIILSPIFFMIY-TFAKQHLFTVAPGIIT--TGPVIITAS 76

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G +K   V++   +L+   L+  +       I+  +  ++ L     T+K   DF   
Sbjct: 77  QNGTVKLIDVKDSEFVLEDQLLMELDAPILEQEIEFIENELEQLYQE-QTQKITEDFGPY 135

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY--LNRLD 180
              +       ++   +      ++   KV     +++          + + Y  LN+ +
Sbjct: 136 ISAIGAAKLNLKKITKIKVNYDQYAKEGKVSQVDYAAIVGIYNTAQNNLTNAYIALNQAE 195

Query: 181 LENKSSLLRALLSSHQKDLT 200
           +  K  LL   ++   ++L 
Sbjct: 196 IAQKQRLLAGGVAQVTRELN 215


>gi|194433022|ref|ZP_03065305.1| multidrug resistance protein A [Shigella dysenteriae 1012]
 gi|194418749|gb|EDX34835.1| multidrug resistance protein A [Shigella dysenteriae 1012]
          Length = 394

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 102 RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 161

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 162 EELQHARDAVTSAQEQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 215

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 216 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 261

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 262 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 319

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 320 VQRLPVRIELDQKQLEQYPLRI 341



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 65/192 (33%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 36  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 88

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +        +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 89  EGDVLVTLDPTNARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 148

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 149 RRVPLGNANLIGREELQHARDAVTSAQEQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 208

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 209 EVRNAWLALERT 220


>gi|148253158|ref|YP_001237743.1| HlyD family secretion protein [Bradyrhizobium sp. BTAi1]
 gi|146405331|gb|ABQ33837.1| Putative HlyD family secretion protein [Bradyrhizobium sp. BTAi1]
          Length = 377

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/323 (13%), Positives = 91/323 (28%), Gaps = 28/323 (8%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R  +    S +     K  V +       + L+      +          + +   +L  
Sbjct: 71  RADLTQLSSRVAGEVLKVAVSDFQRVKAGDLLIQIDPADYEAQVSQAEATVEAAQAALDN 130

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              ++   Y      E +     A     +++    ++L +  A ++  L Q      K+
Sbjct: 131 LSNQIELQYATIAQAEAQQVSAGAAEVQARQEEERQQSLSQSEAGTRQRLEQATAAYAKA 190

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             ++R +          +  L        A+     +                       
Sbjct: 191 QADVRASRAVIAAQRHQLEVLTGTKKQRGADLAGAKAAL---------------AAARLK 235

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                I +P  G +V  +   + +Y      L+ +VP  ++  + A     Q+ HV  G 
Sbjct: 236 LGYTRITAPFDG-VVGQRQVQAGDYVNVGSSLIAVVPLPQVFIV-ANYKETQLTHVAPGQ 293

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNN 402
              +    +     ++    +E+I P    Q      +  T  + +V+ +I      D N
Sbjct: 294 PVDITVDTFP---GEQMHGRVERIAPASGSQFALLPPDNATGNFTKVVQRIPVRIALDPN 350

Query: 403 ----IELRNGFPAEVLFTAKNTT 421
                 L  G            T
Sbjct: 351 QPLLARLLPGMSVVTHIHTAGRT 373



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 50/138 (36%), Gaps = 9/138 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K  V +  ++  G  L+  +  +    +   + ++       +  ++ALD L+N+ 
Sbjct: 83  GEVLKVAVSDFQRVKAGDLLIQIDPADYEAQVSQAEATV-------EAAQAALDNLSNQI 135

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++        E Q +          ++       S+ +S      R+          +  
Sbjct: 136 ELQYATIAQAEAQQVS--AGAAEVQARQEEERQQSLSQSEAGTRQRLEQATAAYAKAQAD 193

Query: 185 SSLLRALLSSHQKDLTMM 202
               RA++++ +  L ++
Sbjct: 194 VRASRAVIAAQRHQLEVL 211


>gi|197284303|ref|YP_002150175.1| multidrug resistance protein A [Proteus mirabilis HI4320]
 gi|194681790|emb|CAR41014.1| multidrug resistance protein A [Proteus mirabilis HI4320]
          Length = 391

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 80/270 (29%), Gaps = 30/270 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + +M    +N   L+    L    L+  Q DL   + L E+N + + +
Sbjct: 101 ALDKAKTALANSVRQMHQQIINGRQLKANIVLRETELAKLQNDLRRREVLGERNVIGKEE 160

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      V  +   L     +       I                E+             
Sbjct: 161 LQHAREAVATAKAALDVAKEQYNANQAIILTTPIAQQPSVLQAATEVRNAWL-------- 212

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  ILSP  G +   +S          +PLM +VP +   +I A   
Sbjct: 213 ----------ALQRTKILSPAEGYVSR-RSVQVGAQVAPGKPLMAVVPVTG-MWIDANFK 260

Query: 336 PKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----EYY 387
             Q+ +++ G  A +    Y    I   + + + +            N         +  
Sbjct: 261 ETQLANMRIGQPAKITTDFYGKKVIYHGRVQGLDMGTGSAFSLLPAQNASGNWIKVVQRL 320

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            V + + +   ++  + +  G   EV    
Sbjct: 321 PVRISLDEKEVAEKPLRI--GLSTEVTVDT 348



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 62/175 (35%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-- 109
              N + +    SG +    V+N   +  G PL+  +D +    +D  K ++ N      
Sbjct: 58  VTGNQIMVMPQISGSVTTVYVDNTDYVKAGEPLVQLDDSDEILALDKAKTALANSVRQMH 117

Query: 110 ---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              I+  +   + +  + ++ +   + R  ++L           +     +++   +L +
Sbjct: 118 QQIINGRQLKANIVLRETELAKLQNDLRRREVLGERNVIGKEELQHAREAVATAKAALDV 177

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLF---EKNAVSQNDL 216
              +  +     L   +  + S+L+A        L + +       +  VS+  +
Sbjct: 178 AKEQYNANQAIILTTPIAQQPSVLQAATEVRNAWLALQRTKILSPAEGYVSRRSV 232


>gi|148263201|ref|YP_001229907.1| RND family efflux transporter MFP subunit [Geobacter uraniireducens
           Rf4]
 gi|146396701|gb|ABQ25334.1| efflux transporter, RND family, MFP subunit [Geobacter
           uraniireducens Rf4]
          Length = 407

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 75/258 (29%), Gaps = 56/258 (21%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           L ++     N L+ E   S  + +++  ++ L   K L E+  ++Q+DL+  +    ++ 
Sbjct: 93  LAQVEQSRGNFLNAEANLSKAKVVVADTKRTLGRNKQLMEQGIIAQSDLDAAQTAYDQAV 152

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             ++                                      +         L   E   
Sbjct: 153 AGVKS------------------------------------AEAVVIQTSGALRQAETNL 176

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
              TI SP+ G +V             S     L  I        I   V    I  +K 
Sbjct: 177 RYATIRSPVDGIVVSRNVD-VGQTVAASFQTPTLFTIAQDLTKMEIDTSVDESDISRIKV 235

Query: 345 GYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           G TA      Y D +   F  I+ +I   P+++Q                   +  ++  
Sbjct: 236 GQTANFTVDAYPDRQ---FSGIVTQIRNAPVVTQNVVTYVVV-----------IGVNNKE 281

Query: 403 IELRNGFPAEVLFTAKNT 420
           + L+ G  A V       
Sbjct: 282 LMLKPGMTANVAVQTMKK 299


>gi|325981307|ref|YP_004293709.1| secretion protein HlyD family protein [Nitrosomonas sp. AL212]
 gi|325530826|gb|ADZ25547.1| secretion protein HlyD family protein [Nitrosomonas sp. AL212]
          Length = 348

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 71/402 (17%), Positives = 135/402 (33%), Gaps = 94/402 (23%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S+  ++ L I+ ++G+I W  +      + +SG I    N   +++   G +++  VE  
Sbjct: 37  SIVAISSLPIVYLLGIIIWETIA-----IEASGRIRV--NNFSVRTAVDGYVQQIFVEPM 89

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G PL    +I   D  D   + +  L+                            
Sbjct: 90  QTVSEGKPLAELINIPLIDSYDRLHIELDALK---------------------------- 121

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                          K+      SV  S ++              L++  +L +   ++ 
Sbjct: 122 -----------KEQRKLLAQAKRSVSSSAQLSRYAQEHKRFAYNRLQHYEALFKQG-AAT 169

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q ++T  KN +++           E IV     E +E    Q + +R I+    +  LEF
Sbjct: 170 QAEITATKNQYQR---------ALENIVALEKAEHQEQ--GQSSEMRRISNQMGQMQLEF 218

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                           +Q ++++P    IV         Y  + 
Sbjct: 219 EKIR-------------------------DQLQQLSLVAPAGNGIVTEVFVQPGEYLSRG 253

Query: 316 QPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           Q L++I+ P  +  ++ A + PK   +  +G   TV+FP       +K KA I  + P +
Sbjct: 254 QALLEIIFP--EKVHVDAFIPPKYQNYAVEGQIVTVKFP-----NGEKTKAKIISV-PGV 305

Query: 375 SQQDNNLQTQEYYEVILKITDLA--FSDNNIELRNGFPAEVL 414
           +Q+    +      V   I          N  L NG P  + 
Sbjct: 306 TQKTLTEEVNPLEPVRTAILAQLEFIEQVNNRLINGMPVTIY 347


>gi|218891321|ref|YP_002440188.1| membrane fusion protein [Pseudomonas aeruginosa LESB58]
 gi|66957904|gb|AAY59066.1| membrane fusion protein [Pseudomonas sp. M18]
 gi|218771547|emb|CAW27315.1| membrane fusion protein [Pseudomonas aeruginosa LESB58]
          Length = 336

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 104/310 (33%), Gaps = 15/310 (4%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           D+E +   + N     +  AFE+ E  +     +     +      + +    L+++  R
Sbjct: 28  DSEDALKLYGNVDIRQVSLAFENSERIVALHAEEGDKVRAGQVLAELDTRTLRLRIETAR 87

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            R     ++ L  ++      +   +  L   +   E   +    L +         +  
Sbjct: 88  ARIGVQEQVLLRLRNGTRPQEVDQSRARLQAAQAEAELARLELVRLQRIAGGTDGKGVSR 147

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +        +     E+ ++        +     D+ Q Q       + L +LE    Q 
Sbjct: 148 QSLDAAAARLKVARAEVENQRKAWQLADIGPRDEDIAQAQAELEVARADLRLLEHYLSQA 207

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P   T+   +     + A  S+P+  +   +   ++RA V  +Q+  V  G  A V
Sbjct: 208 QLKAPRDATV-RTRLLEPGDMASPSRPVFALA-LTDPKWVRAYVNERQLGRVHPGQKARV 265

Query: 351 RFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
                  + E+     +  I  +      + +  +L+T   YE+ + + D         L
Sbjct: 266 ---VTDSVPERPVDGRVGYISSVAEFTPKTVETEDLRTSLVYEIRVLLDDPED-----RL 317

Query: 406 RNGFPAEVLF 415
           R G PA V  
Sbjct: 318 RLGMPATVYL 327


>gi|325920222|ref|ZP_08182177.1| membrane fusion protein [Xanthomonas gardneri ATCC 19865]
 gi|325549308|gb|EGD20207.1| membrane fusion protein [Xanthomonas gardneri ATCC 19865]
          Length = 361

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 55/175 (31%), Gaps = 12/175 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             L  +   V      ++++       +    +L  E      ++       + +     
Sbjct: 105 TRLASERAQVQAEIAAIQQSRAVASIDVARSRQLLAEGLAGRRDFEL-TQIKVAEADAKL 163

Query: 274 ADEMSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           A+  +KLT ++    +++   + +P  G +    + S S        L  I P      +
Sbjct: 164 AESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAV 223

Query: 331 RAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQ 377
              +  + +  ++ G            ++F  +  +    F   +  IDP  +  
Sbjct: 224 ELYIDGRDVPLIRPGRPVRLEFEGWPAIQFSGWPSVAHGVFDGRVRAIDPNAAPD 278



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 62/159 (38%), Gaps = 13/159 (8%)

Query: 42  ISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE------- 91
            + S  G+++     D   ++ +   G ++++ V +G  + +G P+    D++       
Sbjct: 48  QTASGKGQVVALDPGDRQQQVTAFVPGRVERWYVHDGQHVSRGDPIARVGDLDPDLLTRL 107

Query: 92  --TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                 +  +  +I+  R     + +    L  +     + FE  + ++ +   K   + 
Sbjct: 108 ASERAQVQAEIAAIQQSRAVASIDVARSRQLLAEGLAGRRDFELTQIKVAEADAKLAESR 167

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +K+    I  + R     +   R   + +L+  + S+++
Sbjct: 168 AKLTRIDI-QLNRQSAQLVRAPRDGRVQQLNAASGSAMV 205


>gi|320107075|ref|YP_004182665.1| RND family efflux transporter MFP subunit [Terriglobus saanensis
           SP1PR4]
 gi|319925596|gb|ADV82671.1| efflux transporter, RND family, MFP subunit [Terriglobus saanensis
           SP1PR4]
          Length = 405

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/315 (11%), Positives = 83/315 (26%), Gaps = 83/315 (26%)

Query: 49  EILNEDNVVEIKSPFS-----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            I     V  I++  +     G ++K  V  G  +  GT ++  +D              
Sbjct: 44  TISTNGKVEPIQAFEAHAASAGTVQKLLVREGQHVTAGTLMVQLDDSGA----------- 92

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                 + T ++ L      +  + +                                  
Sbjct: 93  ---LARVATARAGLAGAKGSFQDMSQG--------------------------------- 116

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                         R+ +    +  R  +   Q DL+ ++ L  K A S ++++  +  +
Sbjct: 117 ---------GSQDERISIAGDLNRSRLQVQQAQLDLSTLQQLQAKGAASTSEVSAAQSRL 167

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +   +                         A+    I+  L  NQ       + L   
Sbjct: 168 ATAQANMDAVQKRSTARFA-------------ASDKTRIAAQLADNQ-------AGLLAA 207

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           EK      + +P AG +      +   +      ++++        +RA      +  + 
Sbjct: 208 EKNLAFAIVRAPFAGIVYSLPIRAY-EFLNPGDEILRMA-DLNRMQVRAYFDEPDVGKLV 265

Query: 344 KGYTATVRFPHYADI 358
            G    V +    + 
Sbjct: 266 VGQKVRVTWDARPNR 280


>gi|145628172|ref|ZP_01783973.1| multidrug resistance protein A [Haemophilus influenzae 22.1-21]
 gi|144979947|gb|EDJ89606.1| multidrug resistance protein A [Haemophilus influenzae 22.1-21]
          Length = 390

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 96/292 (32%), Gaps = 37/292 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +   T +K+      S   +L   + ++  +      L++        L+  Q +L
Sbjct: 87  DILVELDDTNAKLSFEQAKS---NLANAVRQVEQLGFTVQQLQSAVHANEISLAQAQGNL 143

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L +  A+ +      +  V  +   L  + ++       ++ +      +  N +
Sbjct: 144 ARRVQLEKMGAIDKESFQHAKEAVELAKANLNASKNQLAANQALLSNVPLREQPQIQNAI 203

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                             + L       ++  I SPI G +                 LM
Sbjct: 204 ------------------NSLKQAWLNLQRTKIRSPIDGYVARRNV-QVGQAVSVGGALM 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +V  ++  ++ A     Q+ +++ G    + F  Y   + K+F  +I  I+        
Sbjct: 245 AVV-SNEQMWLEANFKETQLTNMRIGQPVKIHFDLYG--KNKEFDGVINGIEMGTGNAFS 301

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             P  +   N ++  +   V +K+    F++  + +  G  A       +++
Sbjct: 302 LLPSQNATGNWIKVVQRVPVRIKLDPQQFTETPLRI--GLSATAKVRISDSS 351



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 71/211 (33%), Gaps = 21/211 (9%)

Query: 20  MTLLSIIGIIGLITWSILLP----IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           + +L IIGI   + W   L      E +     +++    V       +G + K   +N 
Sbjct: 28  ILVLLIIGIACALYWFFFLKDFEETEDAYVGGNQVMVSSQV-------AGNVAKINADNM 80

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++  G  L+  +D       +  K ++ N    ++     +  L +     E +    +
Sbjct: 81  DKVHAGDILVELDDTNAKLSFEQAKSNLANAVRQVEQLGFTVQQLQSAVHANEISLAQAQ 140

Query: 136 EQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-----LDLENKSSLL 188
             L     L K  +   + F +   +V  +          +  N+     + L  +  + 
Sbjct: 141 GNLARRVQLEKMGAIDKESFQHAKEAVELAKANLNASKNQLAANQALLSNVPLREQPQIQ 200

Query: 189 RALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
            A+ S  Q  L + +          V++ ++
Sbjct: 201 NAINSLKQAWLNLQRTKIRSPIDGYVARRNV 231


>gi|326628872|gb|EGE35215.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 399

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 108 QAFERAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 167

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 168 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 220

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 221 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 267

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   TV    Y D    K+   +  +D          P  +   N ++  
Sbjct: 268 KETQLANMRIGQPVTVITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 325

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 326 QRLPVRVELDARQLEQHPLRI 346



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 66  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFERAKTALASSVRQTH 125

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 126 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 185

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 186 AIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERT 225


>gi|317049238|ref|YP_004116886.1| efflux pump membrane protein [Pantoea sp. At-9b]
 gi|316950855|gb|ADU70330.1| efflux pump membrane protein [Pantoea sp. At-9b]
          Length = 390

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 88/262 (33%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +    L +  L   + DL   + L   N + +
Sbjct: 98  EQAFEKAQTALATSVRQTHQLMINGKQDQATIKLQQTALEQAEADLKRREPLGAANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   + +       I       +LE    +K+ + +L       
Sbjct: 158 EELQHARDAVATAKAQLDVAVQQYNANQAMILN----TSLENQPAVKQAAAELRDAWLAL 213

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         ++  I SP+ G +   +S    +    S PL+ +VP +   +I A 
Sbjct: 214 --------------QRTEIRSPMDGYVSR-RSVQVGSQISTSTPLLAVVPATN-LWIDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+  V+ G  ATV    Y D     +   +  +D          P  +   N ++ 
Sbjct: 258 FKETQLAEVRIGQPATVVSDIYGDDV--VYHGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++     +++ + +
Sbjct: 316 VQRLPVRVELDAKEVAEHPLRI 337



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 66/209 (31%), Gaps = 10/209 (4%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
             + L  +  IIG+   +    +      + +     N V++ +  SG + K   ++   
Sbjct: 23  ALILLAIVFVIIGIAYLAYWFLVLRHFQETDDAYVSGNQVQVMAQVSGSVNKVWFDDTDF 82

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIK-------NLRCHIDTEKSALDFLNNKYDVLEKA 130
           + +G  L++ +  +     +  + ++         L  +   +++ +       +  E  
Sbjct: 83  VKKGDVLVSLDKTDAEQAFEKAQTALATSVRQTHQLMINGKQDQATIKLQQTALEQAEAD 142

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            + RE      L               +     + ++        +    LEN+ ++ +A
Sbjct: 143 LKRREPLGAANLIGREELQHARDAVATAKAQLDVAVQQYNANQAMILNTSLENQPAVKQA 202

Query: 191 LLSSHQKDLTMMKNLFEK---NAVSQNDL 216
                   L + +          VS+  +
Sbjct: 203 AAELRDAWLALQRTEIRSPMDGYVSRRSV 231


>gi|197285123|ref|YP_002150995.1| multidrug resistance protein MdtN [Proteus mirabilis HI4320]
 gi|227355552|ref|ZP_03839947.1| multidrug resistance efflux pump [Proteus mirabilis ATCC 29906]
 gi|194682610|emb|CAR42688.1| putative HlyD-family secretion protein (putative multidrug
           resistance protein) [Proteus mirabilis HI4320]
 gi|227164348|gb|EEI49237.1| multidrug resistance efflux pump [Proteus mirabilis ATCC 29906]
          Length = 346

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 83/217 (38%), Gaps = 13/217 (5%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEIKSPF 63
           + +    SL R+  + +  I  ++ W     S L P+          + + N + I +  
Sbjct: 1   MDKKIKKSLARVITIIVFLITLILLWQSIHISALNPLSEDA------IIDANKINISASV 54

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I    V+  S++ +G  L T +       ++  K  ++  +  +  ++  +    + 
Sbjct: 55  PGRIAAVYVKENSKVKKGDLLFTLDPTMYALRVEQAKEQLQIAQATLSNKQRIIIAETSN 114

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +V ++  +  +  L       +     +    +++  + +    T      +     + 
Sbjct: 115 SEVAQEQIKRAQVNLSLATQSLNRLEPLLAKGFVTA--QQVDDARTLKHDAEVTLKQAQK 172

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           ++    AL+++   +  ++K+L    A+++ +L+  E
Sbjct: 173 QNVASEALINNTDSEEALVKSLKTSLAMAEWELSNTE 209



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 72/242 (29%), Gaps = 26/242 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L       ++   +     +     +L  K   + +   N    + +    +  LS   +
Sbjct: 75  LFTLDPTMYALRVEQAKEQLQIAQATLSNKQRIIIAETSNSEVAQEQIKRAQVNLSLATQ 134

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L  ++ L  K  V+   ++    + + + + L++   +       IN    E  L    
Sbjct: 135 SLNRLEPLLAKGFVTAQQVDDARTLKHDAEVTLKQAQKQNVASEALINNTDSEEAL---- 190

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                               + L + E       + +P  G I      S   +    Q 
Sbjct: 191 ---------------VKSLKTSLAMAEWELSNTEVRAPSNGYIAGV-VLSPGEFILSGQS 234

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDPIISQ 376
           +  ++  S   +  A      + ++K G    +    Y+ I  +   K  +E I   +  
Sbjct: 235 VFTLI-DSDTWFASAYFKETDLNNIKIGSCVVI----YSMIDNQHPIKGKVEGISRGVMS 289

Query: 377 QD 378
            D
Sbjct: 290 TD 291


>gi|148260789|ref|YP_001234916.1| secretion protein HlyD family protein [Acidiphilium cryptum JF-5]
 gi|146402470|gb|ABQ30997.1| secretion protein HlyD family protein [Acidiphilium cryptum JF-5]
          Length = 350

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 92/278 (33%), Gaps = 21/278 (7%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN--- 204
              +        +  +L                   K++L R L  S  +++   K    
Sbjct: 64  AVQEGARVRRGELLATLDDTSYAAALAQAEAAMANRKATLARMLAGSRPEEIAQAKATMD 123

Query: 205 -LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L  +         + E +  KS   L++  + +       ++                +
Sbjct: 124 ALKAQADNDGRVYRRLESLSRKSAASLQDRDNARAAFRAARDQYQAARQAYLLAVKGPRA 183

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-V 322
            D+   +  + +  + + +  +  ++  + +P  G I  ++     + A  + P+  I +
Sbjct: 184 EDIAAARAAWREAAAAVALARRNLDETKLHAPADGVI-EDRILEPGDMASPATPVFTIAL 242

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQ 377
           P     ++RA V   ++  ++ G TA+V    +   R +     I  I P       + +
Sbjct: 243 PS--PLWVRAYVPEAELGRLRPGMTASVSTDSFPGTRYR---GWIGYISPTAEFTPRTIE 297

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              L+T   Y + + + D       + L  G PA V  
Sbjct: 298 SPELRTALVYRIRVYVCDP---RGQLRL--GMPATVRI 330


>gi|219667766|ref|YP_002458201.1| efflux transporter RND family, MFP subunit [Desulfitobacterium
           hafniense DCB-2]
 gi|219538026|gb|ACL19765.1| efflux transporter, RND family, MFP subunit [Desulfitobacterium
           hafniense DCB-2]
          Length = 517

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/355 (11%), Positives = 105/355 (29%), Gaps = 64/355 (18%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V+ G  +  G  L   +       +     S+K    +   +K   +      
Sbjct: 70  GKVREIYVKVGDAVTAGQALAQMDTETLQQEVTESMASLKEAELNWQQQKVEAEG----- 124

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   +  +          +         ++   +SL   +             E+ 
Sbjct: 125 --------TLVKARQALRTAEQNADPAYLQNQLAIAEQSL--LIAGNNLAASQLSGDESS 174

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +  L+  Q DL  ++N +   A         E+ V  +  +L              
Sbjct: 175 ILQAKTALTQAQSDLINVQNTYNGGA---------EQAVDSAKADLE------------- 212

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                         + E+     Q + + A   + +   ++   + T+++P  G I+   
Sbjct: 213 --------------IAEVKLARLQERTSLAQAETAVVKAQENLAKATLVAPSDGVIIEIP 258

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                     +  ++ +    +L  + + V+  ++  +K G  A +         E    
Sbjct: 259 V-KEGQTLSDTTTVLNLATGGELLIVESYVSQDEVTKIKTGQKANISL---DSAPEDYMS 314

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           A + ++    +   N       ++V +++ ++  +     +R G  A V      
Sbjct: 315 ATVTQVALKGTTTQNVTT----FQVTMQMDEVTDA-----IRPGMNANVGIIIAE 360


>gi|237745809|ref|ZP_04576289.1| membrane protein ybhG [Oxalobacter formigenes HOxBLS]
 gi|229377160|gb|EEO27251.1| membrane protein ybhG [Oxalobacter formigenes HOxBLS]
          Length = 325

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/271 (10%), Positives = 74/271 (27%), Gaps = 39/271 (14%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           + +   ++     +                 ++        L   + L +K  +S   L+
Sbjct: 82  AQLKADIRAAQAAVEQARETAKAAREDVKSAQSQQELAGVTLKRTQELIKKGFISAAQLD 141

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           +    +  +   L                                   + Q   + A+  
Sbjct: 142 KDVSSMRTANASLAS-----------------------------ARNRVSQADASIAEAE 172

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +++  L+   +  T+ SP+ G I+Y +             +  I+  +   Y+   ++  
Sbjct: 173 ARVASLQSNLDDLTLKSPVDGRILY-RLAEPGEVLSPGGRVFSILDLND-VYMYIYLSSA 230

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI-----ISQQDNNLQTQEYYEVILK 392
           +   V+ G  A +      D         +  + P         +  + + +  + V LK
Sbjct: 231 EAGSVELGSEARIVLDALPDQ---PIPCTVTYVSPRNQFTPKEVETRDEREKFMFRVKLK 287

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           +       N    + G P          T+ 
Sbjct: 288 VDQDWLQQNVNIAKPGMPGVGWVKTSPDTVW 318



 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 42/129 (32%), Gaps = 2/129 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +     G+ +  G      +D +    I   + +++  R      +  +    ++ 
Sbjct: 57  GKLVEVYFREGADLKTGEVAAQLDDAQLKADIRAAQAAVEQARETAKAAREDVKSAQSQQ 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++       +  Q L   G   +         + +   SL     R+     +  + E +
Sbjct: 117 EL--AGVTLKRTQELIKKGFISAAQLDKDVSSMRTANASLASARNRVSQADASIAEAEAR 174

Query: 185 SSLLRALLS 193
            + L++ L 
Sbjct: 175 VASLQSNLD 183


>gi|325294597|ref|YP_004281111.1| efflux transporter, RND family, MFP subunit [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065045|gb|ADY73052.1| efflux transporter, RND family, MFP subunit [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 412

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 52/371 (14%), Positives = 112/371 (30%), Gaps = 77/371 (20%)

Query: 43  SVSSSGEILNE-DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            + ++G +  +    +++ +  SG + K  V  G  + +G  +   ++            
Sbjct: 44  VIDATGIVKPQVGGEIKVGARISGTVVKENVRVGDYVNKGDLIAIIDN------------ 91

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
             + L+  +   K+ L+ +   Y                                     
Sbjct: 92  --RELKEELKKAKAHLEEVKKTYS------------------------------------ 113

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             +K++  R++S   +    E K    +      + +    K LF+    ++  L Q + 
Sbjct: 114 EKIKIQEMRLKSALASLTAAEAKLKAEKENYELKKWEYDRQKKLFKIGYTTEQKLKQAKA 173

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
              ++   L+              E   +ANL+     + +     + +       + L 
Sbjct: 174 EFERAQSSLKAA-----------EESLKKANLDVKIEKRNLEELKAKYKSDLETAKAALK 222

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR--AKVTPKQI 339
             E       I +P +G I +  +              + V       +     V   +I
Sbjct: 223 QAEIRYSYSYIYAPKSGIISFVST-QEGETVVAGLNAPEFVTILDPEKLENWIYVDETEI 281

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +KKG         Y   R K FK  +++I P    +   L    YY V+ +     F 
Sbjct: 282 GKIKKGMDVEFTVDAY---RGKIFKGKVKEIYP----KPKILNNVVYYIVVAR----GFK 330

Query: 400 DNNIELRNGFP 410
           D  + L+    
Sbjct: 331 DVKL-LKPEMT 340


>gi|330447244|ref|ZP_08310894.1| efflux transporter, RND family, MFP subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328491435|dbj|GAA05391.1| efflux transporter, RND family, MFP subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 367

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 77/208 (37%), Gaps = 21/208 (10%)

Query: 207 EKNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEI--- 262
               +S+      +R+     L  +  N+ E             EA  +    L      
Sbjct: 75  ASGVISKIAFESGQRVKAGQELVSINSNVEESSLQSTKAKLPAVEATYKRYQDLYRKGSV 134

Query: 263 -SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               L++ +  +   +S++  LE++ +++ I++P  G +   ++     Y Q    ++++
Sbjct: 135 SKSSLDEAKANYRALVSQIKSLEESIQRRDIVAPFDGEV-GLRNVYLGQYIQPGTQIVRL 193

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
              ++    R  V    I  ++ G T  +    Y DI    FK  I  I+P ++ Q   +
Sbjct: 194 -EDTRTMRFRFTVPQTDISKIQIGQTVDINVDAYQDI---DFKGQITAIEPAVNAQTGLV 249

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGF 409
           Q Q               ++  +LR+G 
Sbjct: 250 QVQ-----------ADIPNSGGKLRSGM 266



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 90/305 (29%), Gaps = 26/305 (8%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           ++ + G I     V  + S  SG+I K   E+G ++  G  L++         +   K  
Sbjct: 56  AIQAIGFIEPVQGV-TLTSEASGVISKIAFESGQRVKAGQELVSINSNVEESSLQSTKAK 114

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +  +       +      +     L++A  +    +        S   +           
Sbjct: 115 LPAVEATYKRYQDLYRKGSVSKSSLDEAKANYRALVSQIKSLEESIQRRDIVAPFDGEVG 174

Query: 163 SLKMKLTRMRSIYLNRLDLENKS-------------------SLLRALLSSHQK-DLTMM 202
              + L +        + LE+                       +   + ++Q  D    
Sbjct: 175 LRNVYLGQYIQPGTQIVRLEDTRTMRFRFTVPQTDISKIQIGQTVDINVDAYQDIDFKGQ 234

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI--NELYDEANLEFANYLK 260
               E    +Q  L Q +  +  S  +LR  +  +  ++     N++             
Sbjct: 235 ITAIEPAVNAQTGLVQVQADIPNSGGKLRSGMFARARVILPTISNQIIVPQTAITYTLYG 294

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           +    L++         + +T  +    +  ILS   G     Q  ++      ++ L+ 
Sbjct: 295 DTVYVLKEVDGKLRAIQTVVTTGQNHGNKVRILS---GIKAGEQIVTTGQIRLSNKSLVH 351

Query: 321 IVPHS 325
           +V + 
Sbjct: 352 VVEND 356


>gi|126659293|ref|ZP_01730429.1| efflux transporter, RND family, MFP subunit [Cyanothece sp.
           CCY0110]
 gi|126619375|gb|EAZ90108.1| efflux transporter, RND family, MFP subunit [Cyanothece sp.
           CCY0110]
          Length = 602

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 78/277 (28%), Gaps = 39/277 (14%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                +      ++          T +    +  L+ +N    + A L    K L     
Sbjct: 177 LAQISASELFTEVAEAQAETDTMRTALEVSKIEILEQKNNIKQIEADLGYLNKKLERFSM 236

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L  + A++Q+D +  E  V      L                   EA ++ A    ++  
Sbjct: 237 LVSQGAIAQDDYDVVESEVQAKQAML------------------SEARVKIARLEAKVIN 278

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           D    Q       +K+           I +P+ G +   +        Q    ++KI   
Sbjct: 279 D----QAKVQQAKAKVATASVISSYTQIEAPVTGIVQE-RIVDPGMVVQPGMGILKIG-D 332

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                ++A V       ++ G     + P             +  I P  + Q   +   
Sbjct: 333 YSQIRLQANVAQHDATKIRIGTPIVAKIPG----TSLTINGQVSSIFPQSNSQTRTVTV- 387

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                     +   ++   ELR+G   E+    +  T
Sbjct: 388 ----------EAVVNNPGGELRSGQFVEMELITQRQT 414



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 50/157 (31%), Gaps = 3/157 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E  V  +G I     VV +    +G +  + V  G +I  G  L      E    +   
Sbjct: 134 LEAKVQYTGTIEPY-QVVTVYPRVAGQLTNYSVYPGDRITTGQTLAQISASELFTEVAEA 192

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +     +R  ++  K  +    N    +E       ++L  F      +   +       
Sbjct: 193 QAETDTMRTALEVSKIEILEQKNNIKQIEADLGYLNKKLERF--SMLVSQGAIAQDDYDV 250

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           V   ++ K   +    +    LE K    +A +   +
Sbjct: 251 VESEVQAKQAMLSEARVKIARLEAKVINDQAKVQQAK 287


>gi|160899682|ref|YP_001565264.1| secretion protein HlyD family protein [Delftia acidovorans SPH-1]
 gi|160365266|gb|ABX36879.1| secretion protein HlyD family protein [Delftia acidovorans SPH-1]
          Length = 397

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 56/418 (13%), Positives = 120/418 (28%), Gaps = 83/418 (19%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            L +    S+  M ++++ G++ ++    L P   +V S+        V  +    SG +
Sbjct: 32  KLIKPSLRSVLVMLVVALAGVLLVLRAWNLFPFAGTVVSTDNAYVRGAVTVLAPQVSGYV 91

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V++   +  G PL+                                          
Sbjct: 92  TEVLVQDYENVKAGQPLVR----------------------------------------- 110

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
               ++R  +      +     ++             +  L   R+            + 
Sbjct: 111 ---IDARTYEAAQAQAQAQLANARAQLANADQTQAQNRATLGASRAG----------LAA 157

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A       +L  ++ L E+ +VS N     ER   ++T  L      +      IN  
Sbjct: 158 AQAESDRAAAELQRVQALSERGSVSLN-----ERDKVRATARLAATNVAKAQADIEINAQ 212

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +A          ++R   + Q   A+  ++L   +   +   + +P  G +       
Sbjct: 213 KIKATT--------VNRASLEAQVQMAE--AQLRQAQINLDNTVVHAPGDGQVSEVGVR- 261

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Y      LM +VP     ++ A     Q   V+ G                     +
Sbjct: 262 RGQYVTAGSQLMYVVP--HTLWVVANFKETQTAQVRIGQAVRFSVDALGGAH---LTGRV 316

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNI---ELRNGFPAEVLFTA 417
            +I P    +      +  T  + +V+ ++   +A   +      LR G    V    
Sbjct: 317 LEIAPATGSEFSVLKADNATGNFTKVVQRLPVKIAIDPDQELAARLRAGMSVVVRLDT 374


>gi|319957821|ref|YP_004169084.1| secretion protein hlyd family protein [Nitratifractor salsuginis
           DSM 16511]
 gi|319420225|gb|ADV47335.1| secretion protein HlyD family protein [Nitratifractor salsuginis
           DSM 16511]
          Length = 372

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/364 (13%), Positives = 109/364 (29%), Gaps = 58/364 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G + + + E    + +G  L   +  +           ++ L   I+            
Sbjct: 52  GGKVIEMKKEENRAVHKGELLARIDPTDFLTAKTRMTHRLEALEQKIEA----------- 100

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                   ++R E++L                 I S+                       
Sbjct: 101 ----ASLRKNRLEKVLKLQSDIARNDVNATRKNIDSM---------------------AL 135

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K +  +  L+  QKDL    +L  K  +        +         +            +
Sbjct: 136 KIAAAKVRLAKLQKDLARFADLLAKRLIEGEKYETVKAEHDALVKNIEAMEMALDAQKEN 195

Query: 244 INELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           + +  +   L   N  +  E+S+ +   Q       S +  L+       + +P  G + 
Sbjct: 196 LKKAQNAFKLSKVNEKEIAELSKTIASLQEQRKALHSAIEDLDHKIAYTRLYAPFDGIVA 255

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             + F +    ++  P+  I    K  Y    ++ K+++ V+ G    +          K
Sbjct: 256 K-KFFDAPKVIKKGSPVYAIT-DPKALYCEVLLSEKKMKGVQPGNRVEISVDAL---EGK 310

Query: 362 KFKAIIEKIDPIISQQ----DNNLQTQEY------YEVILKITDLAFSDNNIELRNGFPA 411
           KF+  +E I P  +        ++ + E+      + V +++ +L        LR G  A
Sbjct: 311 KFEGSVESIAPTSASTFSLVPRDIASGEFTKLDQRFNVRIRLKELDPL-----LRAGMGA 365

Query: 412 EVLF 415
            V  
Sbjct: 366 TVAI 369


>gi|254796546|ref|YP_003081382.1| efflux transporter, RND family, MFP subunit [Neorickettsia risticii
           str. Illinois]
 gi|254589783|gb|ACT69145.1| efflux transporter, RND family, MFP subunit [Neorickettsia risticii
           str. Illinois]
          Length = 363

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 70/214 (32%), Gaps = 16/214 (7%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +       + Q+   + +   ++ E   +    L    ++   A  E  +        L 
Sbjct: 93  EKLARDGQILQEGDTLLRINSDVCEAQLQSLKALLEERKIEYRAAKELKDSGHLSEVKLS 152

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP-LMKIVPHSK 326
                     + L +LE+  E+ TI +P++G ++   + +  +        + +++P   
Sbjct: 153 AALAGLKKAEADLKVLERQMEKHTIKAPVSG-VLGKINVAVGDLVSPGVTLIAELIPLGD 211

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              +R  V+   I +VK+G  A V  P          K     +  +     N       
Sbjct: 212 -YIVRMNVSEADILNVKEGMEADVILPG-----IGAIKGKTRFVSLV----PNGPTGA-- 259

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + V + +    +S N + L  G   +        
Sbjct: 260 FLVEVGVEPKEWSGNRVPL--GMVVDTRVIVDRK 291


>gi|319897614|ref|YP_004135811.1| multidrug efflux system [Haemophilus influenzae F3031]
 gi|309973604|gb|ADO96805.1| Multidrug resistance protein EmrA [Haemophilus influenzae R2846]
 gi|317433120|emb|CBY81494.1| multidrug efflux system [Haemophilus influenzae F3031]
          Length = 390

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 98/292 (33%), Gaps = 37/292 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +   T +K+      S   +L   + ++  +      L++   +    L+  Q +L
Sbjct: 87  DILVELDDTNAKLSFEQAKS---NLANAVRQVEQLGFTVQQLQSAVHVNEISLAQAQGNL 143

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L +  A+ +      +  V  +   L  + ++       +  +      +  N +
Sbjct: 144 ARRVQLEKMGAIDKESFQHAKEAVELAKANLNASKNQLAANRALLRNVPLREQPQIQNAI 203

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                             + L       ++  I SPI G +   ++            LM
Sbjct: 204 ------------------NSLKQAWLNLQRTKIRSPIDGYVAR-RNAQVGQAVSVGGTLM 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +V  ++  ++ A     Q+ +++ G    + F  Y   + K+F  +I  I+        
Sbjct: 245 AVV-SNEQMWLEANFKETQLTNMRIGQPVKIHFDLYG--KNKEFDGVINGIEMGTGNAFS 301

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             P  +   N ++  +   V +K+    F++  + +  G  A       +++
Sbjct: 302 LLPSQNATGNWIKVVQRVPVRIKLDPQQFTETPLRI--GLSATAKVRISDSS 351



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 10/172 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V + S  +G + K   +N  ++  G  L+  +D       +  K ++ N    ++
Sbjct: 57  VGGNQVMVSSQVAGNVAKINADNMDKVHAGDILVELDDTNAKLSFEQAKSNLANAVRQVE 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                +  L +   V E +    +  L     L K  +   + F +   +V  +      
Sbjct: 117 QLGFTVQQLQSAVHVNEISLAQAQGNLARRVQLEKMGAIDKESFQHAKEAVELAKANLNA 176

Query: 170 RMRSIYLNRLDLEN-----KSSLLRALLSSHQKDLTMMKNLFEK---NAVSQ 213
               +  NR  L N     +  +  A+ S  Q  L + +          V++
Sbjct: 177 SKNQLAANRALLRNVPLREQPQIQNAINSLKQAWLNLQRTKIRSPIDGYVAR 228


>gi|330972607|gb|EGH72673.1| secretion protein HlyD [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 402

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 75/204 (36%), Gaps = 20/204 (9%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   ++ + +  RA + + Q +    ++L    A+SQ
Sbjct: 101 EVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRAAVQTAQDNYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +    +  ++  +  L     L D+  +     +K  +  L Q   T 
Sbjct: 161 EELSHARDSLTSA----QSALNNIQQQLSTSVALVDDTVVSSHPDVKAAAAQLRQAYLTN 216

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A              + T+++P+ G +   ++       Q     M ++P     +I A 
Sbjct: 217 A--------------RSTLVAPVTGYVAK-RTVQLGQRIQPGTATMAVIPLD-QLWIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD 357
               Q+  ++ G    +    Y  
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGS 284



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 65/184 (35%), Gaps = 9/184 (4%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            ++   +   + L  ++ I+ L  W+           + +     NVVEI    +G +  
Sbjct: 18  PKSGKRTFMLIGLAIVVVILALGIWAWYEIYGQWSEETDDAYVNGNVVEITPLVTGTVIS 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
              ++G  +  G  LL F+  +        +VS+++   ++      +  L +  D ++ 
Sbjct: 78  IGADDGDLVHAGQVLLKFDPSDA-------EVSLQSAEANLGKVVRQVRGLYSNVDGMKA 130

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              ++   +      Y+    +    G +     L      + S      +++ + S   
Sbjct: 131 QLAAQRAAVQTAQDNYN--RRRSLAAGGAISQEELSHARDSLTSAQSALNNIQQQLSTSV 188

Query: 190 ALLS 193
           AL+ 
Sbjct: 189 ALVD 192


>gi|193211730|ref|YP_001997683.1| secretion protein HlyD family protein [Chlorobaculum parvum NCIB
           8327]
 gi|193085207|gb|ACF10483.1| secretion protein HlyD family protein [Chlorobaculum parvum NCIB
           8327]
          Length = 330

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/315 (12%), Positives = 89/315 (28%), Gaps = 40/315 (12%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +  E++    +      +          ++    +       +     S       M   
Sbjct: 50  LSHEETDDAQITGDIYPVSPRVPGNVLDVMVDSNQMVKAGDTLLTIDQSDYLVKRDMAQA 109

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++          + +     A  +    DL   +NL +++ +S+ +L+        ST +
Sbjct: 110 QLLRARAAVSAAKAEIVAAGANQTKLNADLRRSRNLQKQDVISRAELDAVTAGATASTAQ 169

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                 + K  L                        L + +   A+ M            
Sbjct: 170 HSAAGDQYKAALAQ--------------------EKLAEAELKNAELM---------LSW 200

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            T+ +P  G +          +    Q L+ IV  S   ++ A     Q++H++ G    
Sbjct: 201 TTVTAPADGQVAKKNV-QPGQFVSPGQQLIAIV-GSDELWVVANFKETQLEHMRPGQKVI 258

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEV--ILKITDLAFSDNNI 403
           ++   +     K+ K  I+ I      Q      +  +  + +V   + +  +      +
Sbjct: 259 IKVDAFP---GKELKGHIDSISAGTGAQFALLPPDNASGNFVKVAQRVPVKIVFDEKPEL 315

Query: 404 ELRNGFPAEVLFTAK 418
            L  G         K
Sbjct: 316 PLAAGMNVIAEVKVK 330



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 62/204 (30%), Gaps = 8/204 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWS---ILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           KR    S  R+ +  ++  IGL  W     +  +    +   +I    ++  +     G 
Sbjct: 18  KRPQGQSWPRLAIFGVLLAIGLG-WGGMEFVHSLSHEETDDAQIT--GDIYPVSPRVPGN 74

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V++   +  G  LLT +  +     D+ +  +  LR       +  + +    + 
Sbjct: 75  VLDVMVDSNQMVKAGDTLLTIDQSDYLVKRDMAQAQL--LRARAAVSAAKAEIVAAGANQ 132

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +   + R  + L                G ++          + ++        E +  
Sbjct: 133 TKLNADLRRSRNLQKQDVISRAELDAVTAGATASTAQHSAAGDQYKAALAQEKLAEAELK 192

Query: 187 LLRALLSSHQKDLTMMKNLFEKNA 210
               +LS           + +KN 
Sbjct: 193 NAELMLSWTTVTAPADGQVAKKNV 216


>gi|223937822|ref|ZP_03629722.1| efflux transporter, RND family, MFP subunit [bacterium Ellin514]
 gi|223893428|gb|EEF59889.1| efflux transporter, RND family, MFP subunit [bacterium Ellin514]
          Length = 453

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 72/219 (32%), Gaps = 22/219 (10%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIH--EQKNMLRHINELYDEANLEFANYLKEISRDL 266
             ++Q D    +  + +S  +L       E   +     E   +  L   +   +    L
Sbjct: 92  QLIAQIDPATYKAALMQSQGDLANAKATLELAQVEAKRAEELSKNRLISQSDYDKAVATL 151

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPH 324
            Q++     + + +   +   ++ TI SPI G ++               S P + ++ +
Sbjct: 152 HQSEANVQIKDAAVVRSKVDLDRTTIFSPIDGIVISRNVD-IGQTVAASLSAPTLYVIAN 210

Query: 325 S-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNL 381
                 I A V+   I  ++   T       +     + F   + ++   PI +Q     
Sbjct: 211 DLSKMQIDAVVSEADIGGIETNQTVNFTVDAFP---TRNFHGTVWQVRNSPITNQN---- 263

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                  VI   T +   + + +L+ G  A V   A   
Sbjct: 264 -------VISYDTVIGVDNKDQKLKPGMTANVSIVAAQR 295



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 56/165 (33%), Gaps = 4/165 (2%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +V+++G++    NV  + S  SGII K   +  + +  G  +   +       +   + 
Sbjct: 53  QAVTATGQLNPVTNVQ-VGSQISGIIDKLYADFNTTVTNGQLIAQIDPATYKAALMQSQG 111

Query: 102 SIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            + N +  ++    E    + L+    + +  ++     L           + V    + 
Sbjct: 112 DLANAKATLELAQVEAKRAEELSKNRLISQSDYDKAVATLHQSEANVQIKDAAVVRSKVD 171

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               ++   +  +       +     +SL    L     DL+ M+
Sbjct: 172 LDRTTIFSPIDGIVISRNVDIGQTVAASLSAPTLYVIANDLSKMQ 216


>gi|312794515|ref|YP_004027438.1| secretion protein hlyd family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312181655|gb|ADQ41825.1| secretion protein HlyD family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 534

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/390 (12%), Positives = 122/390 (31%), Gaps = 35/390 (8%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +       I S  +  +K   + +G  I +G  +   +D      +  K+   ++L   +
Sbjct: 62  IVTSEEKPIFSSTTAKVKSVFIRDGDYIKKGDLIAFMDDTSVRLELKKKEREKQSLYRDL 121

Query: 111 DTEKSALDF--LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           +   + L    + + ++        +E  ++               Y   +  R L   +
Sbjct: 122 ENLYARLGECSVYSPFEGQVAEIYVKERDIISKGSPICKVVKTDVVYLTVAFPRWLFNNI 181

Query: 169 TRMRSIYLNRLDLENKSSL-LRALLSSHQKDLTM-----MKNLFEKNAVSQN-------D 215
            +   I +   +   +    +RA  S    D        ++ + ++  +           
Sbjct: 182 NQGDPIEVVVPEYGQEIKGYIRAKSSIFYTDENGFPAFDVEVILKEKGIPVKVKAYCIFR 241

Query: 216 LNQQE-RIVYKSTLELRENI------HEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            N Q+ R + +  +   E+I         KN+      L ++  L       EI   ++ 
Sbjct: 242 YNGQKVRSLNEGIITPEEDIIKSPTDGVVKNIYISKFSLLNKNQLIVELSNDEILEQIKN 301

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-VPHSKL 327
            +        ++    K      I +P+ G +             + + L  I  P +  
Sbjct: 302 KKAQIEQITEEINEYRKKLSMFVIKAPLEGIVSDINIV-EGKLLNEGEKLFVIWNPSN-- 358

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDPIISQQDNNLQTQEY 386
               +K++  ++  +KKG   T++F     I   +     ++ I     ++  +     +
Sbjct: 359 LIFESKISELELDRIKKGQKVTLQFKIPGRIGVNETVNGTVKLIGSRPLEESLDANI-SF 417

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           Y + +          +  ++ G  A     
Sbjct: 418 YSIKI-------GFKSNRIKRGMHATAQMK 440



 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 9/141 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G I  E++   IKSP  G++K   +   S + +   ++   + E  + I  KK  I+ +
Sbjct: 252 EGIITPEED--IIKSPTDGVVKNIYISKFSLLNKNQLIVELSNDEILEQIKNKKAQIEQI 309

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS--VYRSL 164
              I+  +  L        V++   E     +    GK  +   K+F     S  ++ S 
Sbjct: 310 TEEINEYRKKLSMF-----VIKAPLEGIVSDINIVEGKLLNEGEKLFVIWNPSNLIFESK 364

Query: 165 KMKLTRMRSIYLNRLDLENKS 185
             +L   R     ++ L+ K 
Sbjct: 365 ISELELDRIKKGQKVTLQFKI 385


>gi|119116624|dbj|BAF40888.1| hypothetical protein [Vibrio cholerae bv. albensis]
          Length = 338

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 12/198 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +   
Sbjct: 52  IEKQAVAVGQIMPS-HSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDA 110

Query: 100 KVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              +     ++++    L  L    K  ++   ++       D   K      K  N  +
Sbjct: 111 STELMQSEANLESNLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLEL 170

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMKNLFEK 208
                +   +     ++Y               E   S   +  ++    L  MKN+  K
Sbjct: 171 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFK 230

Query: 209 NAVSQNDLNQQERIVYKS 226
            +VS++D  Q    +  S
Sbjct: 231 GSVSEHDAAQLNAGMPAS 248



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 87/225 (38%), Gaps = 35/225 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  N+    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 107 LTDASTELMQSEANLESNLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQ 166

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM---------KIV 322
                 S    + + +   T+ +PI+GTI+  +        +  +P++         +++
Sbjct: 167 NLELIRSGEASIGQAKLSSTLYAPISGTILNIK-------VEVGEPIISTESSQAATEMI 219

Query: 323 PHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + +     +  V+      +  G  A++    Y    E+     + K+  I S++ NN
Sbjct: 220 QLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP---EQVINGQLTKV-AIQSERLNN 275

Query: 381 LQ---TQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +    + +   ++V +   D+     N+ LR+GF A    T + 
Sbjct: 276 PENKDGKSFDNGFQVEIGQLDI---PENMTLRSGFSASAKITLQR 317


>gi|187923687|ref|YP_001895329.1| secretion protein HlyD [Burkholderia phytofirmans PsJN]
 gi|187714881|gb|ACD16105.1| secretion protein HlyD family protein [Burkholderia phytofirmans
           PsJN]
          Length = 358

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 54/416 (12%), Positives = 114/416 (27%), Gaps = 80/416 (19%)

Query: 11  RNHPASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           R  P +++      I+G+  L   W        + +   +     +   +    +G + +
Sbjct: 6   RFSPRTIRLAAYAVILGVAVLACIWLFTGSTSETTN---DAYVTADFTLVAPRVAGQVSE 62

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             VE+  Q+  G  L+  +D              ++ R  + + ++ +          E 
Sbjct: 63  VLVEDNQQVKAGQLLVRIDD--------------RDFRAALMSARADVAAARASVANYEA 108

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              +R+  L+D              +  ++  R   +  T   +    +      +  L 
Sbjct: 109 EI-ARQPALVDQARATLRADDATLEFARANAARYRNLSETGAGTTQEQQHAASALAEELA 167

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               +    +  ++NL         D+ + +R      L   E   EQ  +         
Sbjct: 168 QQARNRAALVATVQNL---------DVLKTQRDKAAGALAHAEAAFEQAKL--------- 209

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                                                     I +PI G +   +S    
Sbjct: 210 ------------------------------------NLSYTEIHAPITGKV-GRRSARVG 232

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-----FK 364
            +     PL+ IVP S+   + A     Q+  ++ G T  ++   +     +        
Sbjct: 233 AFVTTGAPLLAIVPLSEAYIV-ANFQENQLARMRPGDTVRIKVDSFPGAVIRGHVDSLAP 291

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           A      PI         T+    V ++IT     +    L  G   E        
Sbjct: 292 ATGVSFAPIAPDNATGNFTKIVQRVPVRITIDHGQEAAAALSVGLSVETEVAVGRR 347


>gi|21230934|ref|NP_636851.1| RND efflux membrane fusion protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66769064|ref|YP_243826.1| RND efflux membrane fusion protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188992188|ref|YP_001904198.1| Membrane fusion protein [Xanthomonas campestris pv. campestris str.
           B100]
 gi|21112549|gb|AAM40775.1| RND efflux membrane fusion protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66574396|gb|AAY49806.1| RND efflux membrane fusion protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733948|emb|CAP52154.1| Membrane fusion protein [Xanthomonas campestris pv. campestris]
          Length = 361

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 55/175 (31%), Gaps = 12/175 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             L  +   V      ++++       +    +L  E      +Y       + +     
Sbjct: 105 TRLASERAQVQAEIAAIQQSRAVAGIDVERSRQLLAEGLAGRRDYEL-TQIKVAEADAKL 163

Query: 274 ADEMSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           A+  +KLT ++    +++   + +P  G +    + S S        L  I P      +
Sbjct: 164 AESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAV 223

Query: 331 RAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQ 377
              +  + +  ++ G            ++F  +  +    F   +  IDP  +  
Sbjct: 224 ELYIDGRDVPLIRPGRPVRLEFEGWPAIQFSGWPSVAHGMFDGRVRAIDPNAAPD 278



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 74/198 (37%), Gaps = 14/198 (7%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEI 59
           HF      R  P+  K +  + +IG+        L P   + S  G+++     D   ++
Sbjct: 10  HFPTLAAMRP-PSIAKALAWMLLIGVAIAAAILALAPWVQTASGKGQVVSLDPGDRQQQV 68

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIE---------TTDLIDLKKVSIKNLRCHI 110
            +   G ++ + V +G  + +G P+    D++             +  +  +I+  R   
Sbjct: 69  TAFVPGRVETWYVHDGQHVSRGDPIARVGDLDPDLLTRLASERAQVQAEIAAIQQSRAVA 128

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             +      L  +     + +E  + ++ +   K   + +K+    I  + R     +  
Sbjct: 129 GIDVERSRQLLAEGLAGRRDYELTQIKVAEADAKLAESRAKLTRIDI-QLNRQSAQLVRA 187

Query: 171 MRSIYLNRLDLENKSSLL 188
            R   + +L+  + S+++
Sbjct: 188 PRDGRVQQLNAASGSAMV 205


>gi|113971078|ref|YP_734871.1| secretion protein HlyD family protein [Shewanella sp. MR-4]
 gi|113885762|gb|ABI39814.1| secretion protein HlyD family protein [Shewanella sp. MR-4]
          Length = 364

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 88/268 (32%), Gaps = 20/268 (7%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           ++   + D E   + ++A     +     ++ +    + +  D  +QER+  +    +  
Sbjct: 88  ALAKAKSDYETVLNSVKANNEGVKAAEAKLQAMRASYSNAVKDAERQERLYRQDPGAISV 147

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              E     R        A         E +    +N        S +   E+ R+   +
Sbjct: 148 RRLEIAQASRETASSQVSAAEADVRRAIEAAGVNGENNSQLLSARSAVHKAERDRQNTHV 207

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++P  G I    +     +     P M ++      +I A++T   + +++ G +  +  
Sbjct: 208 VAPSRGVITDLNTD-VGQFINAGAPAMTLIAIHD-VWISAELTENNLGNIQVGDSVAILL 265

Query: 353 PHYADIREKKFKAIIEKID--------------PIISQQDNNLQTQEYYEVILKITDLAF 398
                   + F+  I  I               P +S   + L+  + + V +  +    
Sbjct: 266 ---DSRPGQLFRGQIRSIGYGVDDGKKQAVGSLPTVSNSRDWLRQAQRFPVKVSFSSDDM 322

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEI 426
                 LR G  A++L   +  +L   +
Sbjct: 323 PPA-ASLRVGGQADILVYTEEHSLMNPL 349



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 10  KRNHPASLKRMTLLSIIG-IIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFS 64
               P    +   L ++  I+ L+ W +L     P          ++       I +  +
Sbjct: 4   STPTPGKASKYATLGLLTSIVILLIWYLLADRMTPYSSQARVQAFVVP------IATEVT 57

Query: 65  GIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           G I K  V++   + +G PL   +         +     +    S+K     +   ++ L
Sbjct: 58  GQILKVYVQDNQDVAEGDPLFDIDPEPYDIALAKAKSDYETVLNSVKANNEGVKAAEAKL 117

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR-MRSIYL 176
             +   Y    K  E +E       G       ++      +    +        R+I  
Sbjct: 118 QAMRASYSNAVKDAERQERLYRQDPGAISVRRLEIAQASRETASSQVSAAEADVRRAIEA 177

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMM 202
             ++ EN S LL A  + H+ +    
Sbjct: 178 AGVNGENNSQLLSARSAVHKAERDRQ 203


>gi|307296458|ref|ZP_07576281.1| hypothetical protein SphchDRAFT_3545 [Sphingobium chlorophenolicum
           L-1]
 gi|306877972|gb|EFN09196.1| hypothetical protein SphchDRAFT_3545 [Sphingobium chlorophenolicum
           L-1]
          Length = 233

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/263 (11%), Positives = 71/263 (26%), Gaps = 80/263 (30%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    ++      G ++      +I+S   GI+    V+ G                   
Sbjct: 21  AAWAKLDQVTRGEGRVVPFSREQKIQSLEGGILGALLVKEGG------------------ 62

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
                       R   D   +       + D L      R                ++  
Sbjct: 63  ------------RAEGDGRPAGGGGAGPRRDHLPGGHRPR----------------RIGG 94

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              +  +RS + KL         ++ +              +  L +++ L  +N VS+ 
Sbjct: 95  PHRNRTFRSRREKLAETTGSIAQQIGIA-------------ESQLAILRPLVARNMVSEM 141

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +  +  + V     +L E                       + Y +E   +L + +   +
Sbjct: 142 EALKLSQEVATLKGKLAEI---------------------RSTYAQESYTELSKKKADLS 180

Query: 275 DEMSKLTILEKTREQKTILSPIA 297
                +   +    +  ILSP++
Sbjct: 181 ALEPIVRQRDDQLRRTQILSPVS 203


>gi|295132485|ref|YP_003583161.1| HlyD family secretion protein [Zunongwangia profunda SM-A87]
 gi|294980500|gb|ADF50965.1| HlyD family secretion protein [Zunongwangia profunda SM-A87]
          Length = 426

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 78/266 (29%), Gaps = 52/266 (19%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
            + ++    +  +     +  +A L   + +    K LFEK  +S+ + +        + 
Sbjct: 100 QSSVQRSKASMENARANYTQSQASLKQAKANYERNKTLFEKGVISKAEWDGIVSNYEVAE 159

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                  +  ++    + E                                     +   
Sbjct: 160 ANKESAYYSMQSAAATVTE------------------------------------AQDNL 183

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            +  I +P++GTI    +                +++ V +     +   V    I  V+
Sbjct: 184 GRTNIYAPMSGTISKLDAELGERVVGTQQMAGTEILR-VANLSNMEVEVDVNENDIVKVE 242

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--- 400
            G +  V    Y     K+FK ++ +I      +    Q   + +V ++I + ++ D   
Sbjct: 243 VGDSTVVEVDAY---LRKEFKGVVTEISNSADSELTTDQVTNF-KVKVRILEDSYKDLLE 298

Query: 401 ----NNIELRNGFPAEVLFTAKNTTL 422
               N    R G  A V       T 
Sbjct: 299 GKPENYSPFRPGMTATVDIITNKKTA 324



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 71/195 (36%), Gaps = 4/195 (2%)

Query: 39  PIEIS--VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           P++I   VS++G+I  E  V  + S  SG I +  +  G Q+ +G  L+          +
Sbjct: 45  PLDIVETVSATGKIQPEVEVK-LSSEVSGEIIELPIIEGQQVEKGDLLVRINPDIYQSSV 103

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              K S++N R +    +++L      Y+  +  FE       ++ G   +      N  
Sbjct: 104 QRSKASMENARANYTQSQASLKQAKANYERNKTLFEKGVISKAEWDGIVSNYEVAEANKE 163

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +                 L R ++    S  +  L +   + +   + +     +   +
Sbjct: 164 SAYYSMQSAAATVTEAQDNLGRTNIYAPMSGTISKLDAELGERVVGTQQMAGTEILRVAN 223

Query: 216 LNQQERIVYKSTLEL 230
           L+  E  V  +  ++
Sbjct: 224 LSNMEVEVDVNENDI 238


>gi|237803614|ref|ZP_04591199.1| multidrug resistance protein [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331025596|gb|EGI05652.1| multidrug resistance protein [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 402

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 70/204 (34%), Gaps = 20/204 (9%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   ++ + +  RA + + Q +    ++L    A+SQ
Sbjct: 101 QVSLQSAEANLGKVVRQVRGLYSNVDGMKAQMAAQRAAVQTAQDNYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L                     ++ L       +    + +  +  +   +  +    
Sbjct: 161 EEL------------------SHARDSLTSAQSALNNLQQQLSTSVALVDDTVVSSHPDV 202

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L       E+ T+++P+ G +   +S       Q     M ++P     +I A 
Sbjct: 203 KAAAAQLRQAFLANERSTLVAPVTGYVAK-RSVQLGQRIQPGTATMAVIPLD-QLWIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD 357
               Q+  ++ G    +    Y  
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGS 284



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 66/186 (35%), Gaps = 11/186 (5%)

Query: 10  KRNHP--ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           K  HP       + L  I+ + GL  W+           + +     NVVEI    +G +
Sbjct: 16  KDAHPGKRKFLLIGLAIIVVLCGLGIWAWYEVYGQWSEETDDAYVNGNVVEITPLVTGTV 75

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
                ++G  + +G  LL F+  +        +VS+++   ++      +  L +  D +
Sbjct: 76  ISIGADDGDLVREGQVLLKFDPSDA-------QVSLQSAEANLGKVVRQVRGLYSNVDGM 128

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +    ++   +      Y+    +    G +     L      + S      +L+ + S 
Sbjct: 129 KAQMAAQRAAVQTAQDNYN--RRRSLAAGGAISQEELSHARDSLTSAQSALNNLQQQLST 186

Query: 188 LRALLS 193
             AL+ 
Sbjct: 187 SVALVD 192


>gi|26988007|ref|NP_743432.1| secretion protein HlyD family protein [Pseudomonas putida KT2440]
 gi|24982725|gb|AAN66896.1|AE016318_3 multidrug efflux MFS membrane fusion protein, putative [Pseudomonas
           putida KT2440]
          Length = 367

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 82/254 (32%), Gaps = 17/254 (6%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           + +    +  + L    +   +    +K    + A + +++N+  R+  +    ++ N  
Sbjct: 108 VAQAQSADARATLERQDALIAQAEAAVKAAQAEVAFADHEVNRYSRLAEQGAGTVQ-NAQ 166

Query: 236 EQKNMLRHINELYDEANLEFANYLKEI---SRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           + ++ +         A        K++   +  +           + L   +       I
Sbjct: 167 QARSAVDQARARLANAQAARVAARKQVDILTAQVASADGQLKRAEAGLEKAQLDLSYTRI 226

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P+ G +   ++     Y      L+ +VP  +   +       Q+ HV+ G    +  
Sbjct: 227 TAPVDGMV-GERALRVGAYVNPGARLLSVVPLQQAYVV-GNFQETQLTHVQPGQPVRISV 284

Query: 353 PHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNN----IE 404
             ++       +  ++ I P      +    +  T  + +V+ +I      D+       
Sbjct: 285 DTFSGET---LQGHVQSIAPATGVTFAAVKPDNATGNFTKVVQRIPVKIVLDDGQPLLTR 341

Query: 405 LRNGFPAEVLFTAK 418
           LR G   E     +
Sbjct: 342 LRVGMSVEATIDTR 355



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 46/162 (28%), Gaps = 5/162 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK-----VSIKNL 106
              +   +    +G IK+  VE+  Q+  G  L T +  +    +D  +        ++ 
Sbjct: 55  VTADYTVVAPKVAGFIKQVLVEDNQQVTAGQLLATIDARDYQAALDAAQAQLLVAQAQSA 114

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                 E+        +  V     E              +               ++  
Sbjct: 115 DARATLERQDALIAQAEAAVKAAQAEVAFADHEVNRYSRLAEQGAGTVQNAQQARSAVDQ 174

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              R+ +    R+    +  +L A ++S    L   +   EK
Sbjct: 175 ARARLANAQAARVAARKQVDILTAQVASADGQLKRAEAGLEK 216


>gi|224584598|ref|YP_002638396.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224469125|gb|ACN46955.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322715804|gb|EFZ07375.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 399

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 108 QAFEKAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 167

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 168 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 220

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 221 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 267

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   T+    Y D    K+   +  +D          P  +   N ++  
Sbjct: 268 KETQLANMRIGQPVTIITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 325

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 326 QRLPVRVELDARQLEQHPLRI 346



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 66  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFEKAKTALASSVRQTH 125

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 126 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 185

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 186 AIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERT 225


>gi|66044975|ref|YP_234816.1| secretion protein HlyD [Pseudomonas syringae pv. syringae B728a]
 gi|63255682|gb|AAY36778.1| Secretion protein HlyD [Pseudomonas syringae pv. syringae B728a]
          Length = 402

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 75/204 (36%), Gaps = 20/204 (9%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   ++ + +  RA + + Q +    ++L    A+SQ
Sbjct: 101 EVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRAAVQTAQDNYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +    +  ++  +  L     L D+  +     +K  +  L Q   T 
Sbjct: 161 EELSHARDSLTSA----QSALNNIQQQLSTSVALVDDTVVSSHPDVKAAAAQLRQAYLTN 216

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A              + T+++P+ G +   ++       Q     M ++P     +I A 
Sbjct: 217 A--------------RSTLVAPVTGYVAK-RTVQLGQRIQPGTATMAVIPLD-QLWIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD 357
               Q+  ++ G    +    Y  
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGS 284



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 66/184 (35%), Gaps = 9/184 (4%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            ++   +   + L  ++ I+ L  W+           + +     NVVEI    +G +  
Sbjct: 18  PKSGKRTFMLIGLAIVVVILALGIWAWYEIYGQWSEETDDAYVNGNVVEITPLVTGTVIS 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
              ++G  + +G  LL F+  +        +VS+++   ++      +  L +  D ++ 
Sbjct: 78  IGADDGDLVHEGQVLLKFDPSDA-------EVSLQSAEANLGKVVRQVRGLYSNVDGMKA 130

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              ++   +      Y+    +    G +     L      + S      +++ + S   
Sbjct: 131 QLAAQRAAVQTAQDNYN--RRRSLAAGGAISQEELSHARDSLTSAQSALNNIQQQLSTSV 188

Query: 190 ALLS 193
           AL+ 
Sbjct: 189 ALVD 192


>gi|225874583|ref|YP_002756042.1| efflux transporter, RND family, MFP subunit [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791642|gb|ACO31732.1| efflux transporter, RND family, MFP subunit [Acidobacterium
           capsulatum ATCC 51196]
          Length = 416

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 97/315 (30%), Gaps = 79/315 (25%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +VS++G++  + N     +PF G++K   V  G  + +G  LLT +D          
Sbjct: 49  LVSTVSTNGKVEPQANFEAH-APFPGVVKAVYVHAGDHVTKGELLLTMDDSNAQ------ 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
                     + T  + +      Y+V +    S+                         
Sbjct: 102 --------AKLATAYAGIKGAQANYEVAKAGGTSQ------------------------- 128

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                            NRL L+ + +  +  L+  + DL  +K L    A S  ++   
Sbjct: 129 -----------------NRLQLQGQIAKAQIDLNQAKHDLAALKKLELTGAASPGEIASA 171

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +  V      L+                     LE        S D+   +    +    
Sbjct: 172 QERVQADESSLQ--------------------VLEQQRSASVNSMDVAHARAGVQEAEQA 211

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
               +    +  + +P  GT+      ++  Y      L++ V + +   +RA     +I
Sbjct: 212 YAAAQSLVSESNVRAPFDGTVYSLPVSAT-EYVDGGSLLLE-VANLEHLQVRAYFDEPEI 269

Query: 340 QHVKKGYTATVRFPH 354
             +  G   T+R+  
Sbjct: 270 GRLAVGQPITIRWDA 284


>gi|307727178|ref|YP_003910391.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1003]
 gi|307587703|gb|ADN61100.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1003]
          Length = 366

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/402 (12%), Positives = 110/402 (27%), Gaps = 76/402 (18%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               + +++++ ++ L   S    +   V S+ +     +V  +    +G +    V + 
Sbjct: 24  PWMLLAIITVLAVLALAA-SYWFFVGRFVESTDDAYVGGDVTVMAPKVNGFVADVLVRDN 82

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G             L+ L              E                      
Sbjct: 83  QFVHAGQV-----------LVTLDARDYDARLAQASAE---------------------- 109

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                                + S   ++     +         +   +     A L+  
Sbjct: 110 ---------------------VRSAQAAVTELEAKKSLQLATINEQAAEVRASGAELTRS 148

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             D    + L + +AVS   + +    + K+   +  +        R +  L        
Sbjct: 149 AADQVRYRELVKDDAVSNQVVERANADLIKAHAAVDRSSASLVAAQRQLAVL-------- 200

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                     +   Q   A   +   +     E  TI SPI G +  N++      A   
Sbjct: 201 -------DAQIGDAQARVATAQAAERVAALNVEYTTIRSPIDGYV-GNRTARVGLLANTG 252

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P S   +I A     Q++ ++ G T  V     +       +++        S
Sbjct: 253 VSLLTVIPASG-LWIDANFKEDQLKKMRVGDTVDVDLDASSQHLHGVVESLAPATGATFS 311

Query: 376 QQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEV 413
                  T  + +++    +++      D    LR G  A V
Sbjct: 312 VLPAENATGNFTKIVQRVPVRVRLTVPKDMQRVLRPGLSATV 353


>gi|254786040|ref|YP_003073469.1| efflux transporter RND family, MFP subunit [Teredinibacter turnerae
           T7901]
 gi|237684626|gb|ACR11890.1| efflux transporter, RND family, MFP subunit [Teredinibacter
           turnerae T7901]
          Length = 486

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 60/178 (33%), Gaps = 19/178 (10%)

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTF---ADEMSKLTILEKTREQKTILSPIAGT 299
            +    +E  L        ++R  E+  R        + +L   ++ R+  T  +P+ G 
Sbjct: 155 QLVNAQEEYVLALRRKDSNLTRASEERLRALKVDERFIQQLRKSKEVRQTVTFYAPVDGV 214

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +          Y Q    +M I   +   ++ A++  +Q   V+ G    +    + ++ 
Sbjct: 215 VNKLAIR-EGFYVQPGTTMMSIGQLND-IWLEAEIFAQQAALVETGQAVDITIAAFPNL- 271

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
              +   I  + P I  Q+  L         +++ +         L+ G  A +    
Sbjct: 272 --SWTGEISYVYPEIDPQNRTL------RARIELPNTRRL-----LKPGMYANLHIRG 316


>gi|17229147|ref|NP_485695.1| hypothetical protein alr1655 [Nostoc sp. PCC 7120]
 gi|17135475|dbj|BAB78021.1| alr1655 [Nostoc sp. PCC 7120]
          Length = 510

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 78/258 (30%), Gaps = 22/258 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  VE G  +  GTPL   +  +            +     +   ++         
Sbjct: 111 GKVVQLAVEAGQWVSAGTPLARLDTSQLMAQKQELFAQKQQALFQLRELQAG------PR 164

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   ++  Q    L +  S           +   +L+ +L   RS    R  L N+
Sbjct: 165 AETIDTARAKLAQEQALLKEMQSGPRIQTIASARANVNNLQEQLELARSKSKRREALYNQ 224

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            ++ R        D+   +   ++     ++L    R        +       K     +
Sbjct: 225 GAIAREQFDEAITDVNSQQARVKQAQSQLDELLAGTRSEV-----ITAQQARVKQAQSQL 279

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           NEL      E     K   + L+          S+L  LE   E+  + +P +G +   +
Sbjct: 280 NELLAGTRSEVIEAQKAALKQLQ----------SRLASLELDLEKSVLKAPFSGKVSQ-R 328

Query: 305 SFSSSNYAQQSQPLMKIV 322
                      Q ++++V
Sbjct: 329 YLDLGTAVSSGQAIVRLV 346


>gi|238784234|ref|ZP_04628246.1| hypothetical protein yberc0001_26760 [Yersinia bercovieri ATCC
           43970]
 gi|238714801|gb|EEQ06801.1| hypothetical protein yberc0001_26760 [Yersinia bercovieri ATCC
           43970]
          Length = 321

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 17/253 (6%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-LNQQERIVYKS 226
           L  ++    N    + + +LL+A     +      +    + A S  D   ++++ ++ S
Sbjct: 74  LNALKQAQANVQSAQAQLALLKAGYRDEEIAQVKSEVSQREAAFSYADSFLKRQQGLWAS 133

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEK 285
                  +   +            +  + A YL     +++ Q +   A   ++L   + 
Sbjct: 134 KATSANELENARTARNQAQANLQASKDKLAQYLSGNRPQEIAQAEANLAQAEAELAQAQL 193

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             +   +LSP AGT++  ++         S  +  +   +   ++RA V+ + +     G
Sbjct: 194 NLQDTILLSPSAGTVLT-RAVEPGTILSASNTVFTLS-LTDPVWVRAYVSERNLDRAIPG 251

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSD 400
               V F       +K +   I  + P       S +  +L+T   Y + + ITD     
Sbjct: 252 TQVEV-FT--DGRPDKPYHGKIGFVSPTAEFTPKSVETPDLRTDLVYRLRIIITDA---- 304

Query: 401 NNIELRNGFPAEV 413
            +  LR G P  V
Sbjct: 305 -DESLRQGMPVTV 316



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 48/135 (35%), Gaps = 7/135 (5%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G ++  G  L   +D    + +   + ++++ +  +   K+      ++
Sbjct: 45  GGRLASLAVDEGDELQPGQLLGKLDDGPYLNALKQAQANVQSAQAQLALLKAGY---RDE 101

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                K+  S+ E    +   +      ++    +S       +  R ++    + +L+ 
Sbjct: 102 EIAQVKSEVSQREAAFSYADSFLKRQQGLWASKATSANELENARTARNQA----QANLQA 157

Query: 184 KSSLLRALLSSHQKD 198
               L   LS ++  
Sbjct: 158 SKDKLAQYLSGNRPQ 172


>gi|15641571|ref|NP_231203.1| hypothetical protein VC1563 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|9656071|gb|AAF94717.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
          Length = 338

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +   
Sbjct: 52  IEKQAVAVGQIMPS-HSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDA 110

Query: 100 KVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              +     +++++   L  L    K  ++   ++       D   K      K  N  +
Sbjct: 111 STELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLEL 170

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMKNLFEK 208
                +   +     ++Y               E   S   +  ++    L  MKN+  K
Sbjct: 171 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFK 230

Query: 209 NAVSQNDLNQQERIVYKS 226
            +VS++D  Q    +  S
Sbjct: 231 GSVSEHDAAQLNAGMPAS 248



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 87/225 (38%), Gaps = 35/225 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  ++    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 107 LTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQ 166

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM---------KIV 322
                 S    + + +   T+ +PI+GTI+  +        +  +P++         +++
Sbjct: 167 NLELIRSGEASIGQAKLSSTLYAPISGTILNIK-------VEVGEPIISTESSQAATEMI 219

Query: 323 PHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + +     +  V+      +  G  A++    Y    E+     + K+  I S++ NN
Sbjct: 220 QLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP---EQVINGQLTKV-AIQSERLNN 275

Query: 381 LQ---TQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +    + +   ++V +   D+     N+ LR+GF A    T + 
Sbjct: 276 PENKDGKSFDNGFQVEIGQLDI---PENMTLRSGFSASAKITLQR 317


>gi|16766125|ref|NP_461740.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|167992538|ref|ZP_02573636.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168464063|ref|ZP_02697980.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|204929738|ref|ZP_03220812.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|16421363|gb|AAL21699.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|195633139|gb|EDX51553.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|204321457|gb|EDZ06657.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205329314|gb|EDZ16078.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|261247955|emb|CBG25788.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267994933|gb|ACY89818.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301159379|emb|CBW18897.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312913837|dbj|BAJ37811.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223611|gb|EFX48676.1| Multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322614362|gb|EFY11293.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322621573|gb|EFY18426.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322624434|gb|EFY21267.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626632|gb|EFY23437.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633508|gb|EFY30250.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638449|gb|EFY35147.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322639752|gb|EFY36436.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322643798|gb|EFY40348.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649484|gb|EFY45918.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655926|gb|EFY52226.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322661321|gb|EFY57546.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662519|gb|EFY58727.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666893|gb|EFY63068.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671263|gb|EFY67386.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677730|gb|EFY73793.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322681443|gb|EFY77473.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322683842|gb|EFY79852.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323193769|gb|EFZ78972.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197443|gb|EFZ82580.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203258|gb|EFZ88287.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323205204|gb|EFZ90179.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212783|gb|EFZ97594.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323218075|gb|EGA02787.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221662|gb|EGA06075.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323225130|gb|EGA09381.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230838|gb|EGA14956.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323234811|gb|EGA18897.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238850|gb|EGA22900.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241550|gb|EGA25581.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248303|gb|EGA32239.1| multidrug efflux system protein EmrA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252931|gb|EGA36765.1| multidrug efflux system protein EmrA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323256947|gb|EGA40656.1| multidrug efflux system protein EmrA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260578|gb|EGA44189.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264364|gb|EGA47870.1| multidrug efflux system protein EmrA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269498|gb|EGA52951.1| multidrug efflux system protein EmrA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|332989691|gb|AEF08674.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 390

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 99  QAFEKAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 159 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 211

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 212 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   TV    Y D    K+   +  +D          P  +   N ++  
Sbjct: 259 KETQLANMRIGQPVTVITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 316

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 317 QRLPVRVELDARQLEQHPLRI 337



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFEKAKTALASSVRQTH 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 117 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 176

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 177 AIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERT 216


>gi|37528496|ref|NP_931841.1| hypothetical protein plu4679 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787934|emb|CAE17051.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 390

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 75/215 (34%), Gaps = 11/215 (5%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
                L R+ SI       E   + L   +    + +   + L     + Q  L Q +  
Sbjct: 81  QQGDILLRLDSIDAEHA-FERAKNTLANNVRQTHQTIIDNEKLLANIDLKQTALQQAQDD 139

Query: 223 VYKST-LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE-----QNQRTFADE 276
           + +   L L   I ++  +    +    ++ L  A      ++ L        Q      
Sbjct: 140 LKRREHLGLTGAIAKENLIHSRNSVQMAKSELNVARQQYYANKALVIDTPLDQQPAIKLA 199

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            S+L     T ++  I++P+ G +   +S    +  +   PLM IVP     ++ A    
Sbjct: 200 ASQLRDAWLTLQRTQIVAPVTGYVSR-RSVQVGSQIKSGAPLMVIVPAD-QLWVEANFKE 257

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q+ +V+ G   T+    Y       +K  I  +D
Sbjct: 258 VQLANVRIGQPVTLISDFYGSDVT--YKGRIVGLD 290



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 2/130 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V++ +  +G +     +N   + QG  LL  + I+     +  K ++ N      
Sbjct: 54  VVGNQVQVMAQITGSVTAIYADNTDFVQQGDILLRLDSIDAEHAFERAKNTLANNVRQTH 113

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 + L    D+ + A +  ++ L   + LG   +   +   +  +SV  +      
Sbjct: 114 QTIIDNEKLLANIDLKQTALQQAQDDLKRREHLGLTGAIAKENLIHSRNSVQMAKSELNV 173

Query: 170 RMRSIYLNRL 179
             +  Y N+ 
Sbjct: 174 ARQQYYANKA 183


>gi|269959793|ref|ZP_06174172.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835547|gb|EEZ89627.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 373

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 75/241 (31%), Gaps = 24/241 (9%)

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              R  QL++   +        +   +     +L++    + +   +    + + +    
Sbjct: 76  IRVRPNQLVEEGDELAILDKSDYEIAVKQAEENLEIAGQNVGAQTASIASAQARLTSAIV 135

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + +     +  + EK  VS++D ++    +  +   +     + +   + +    +E
Sbjct: 136 ERQNTEAQGNRILAMAEKGVVSKSDADKARAALATARANVVNAEADLEKAKQQLGAEGEE 195

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            +   A  L                    L   +   E+  I +P  G +  N S +   
Sbjct: 196 NSQVKAALLA-------------------LEQAQLNLERTVIRAPTQGGV-SNFSLTEGF 235

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           YA   QP+M  V      +I A      + +V  G    +          K  K  +  I
Sbjct: 236 YASAGQPIMTFVSTED-IWIEAYFRENSLGNVSVGDEVEI---ALDFAPGKVIKGKVSSI 291

Query: 371 D 371
           D
Sbjct: 292 D 292



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 78/212 (36%), Gaps = 13/212 (6%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +K++T   I+ I+ ++ +SI+   +  +  +     +  +V IK   SG +   +V    
Sbjct: 25  VKKVTNYLILFIVVMLGFSIVA--DRIIPVTDNARVKGYIVPIKPQVSGNVLDIRVRPNQ 82

Query: 77  QILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            + +G  L   +         +  + +++   ++      I + ++ L     +    E 
Sbjct: 83  LVEEGDELAILDKSDYEIAVKQAEENLEIAGQNVGAQTASIASAQARLTSAIVERQNTE- 141

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  +R   + +      S   K      ++    +  +    ++      + E  S +  
Sbjct: 142 AQGNRILAMAEKGVVSKSDADKARAALATARANVVNAEADLEKAKQQLGAEGEENSQVKA 201

Query: 190 ALLSSHQKDLTMMKNLFE---KNAVSQNDLNQ 218
           ALL+  Q  L + + +     +  VS   L +
Sbjct: 202 ALLALEQAQLNLERTVIRAPTQGGVSNFSLTE 233


>gi|13472330|ref|NP_103897.1| secretion protein [Mesorhizobium loti MAFF303099]
 gi|14023076|dbj|BAB49683.1| probable secretion protein [Mesorhizobium loti MAFF303099]
          Length = 367

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 86/300 (28%), Gaps = 14/300 (4%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L        +Q+L    ++      +          +++     ++       +L  + S
Sbjct: 72  LAPRVAGHIDQILVEDNQHVDAGQLIIRIDDRPFKAAVERARASVQQQQSALDNLRAQVS 131

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           L  +L+   + DL                          S  + + ++         ++ 
Sbjct: 132 LQNSLIEQAEADLEAKSAAATFTTQDAKRYEVLASTRAGSQQDAQRSLAADGQAKASVSA 191

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                       L  ++  + +         + L   E       I +PI G +  N+  
Sbjct: 192 SRAGLAAARQQ-LDVLNTQISEATAAVLAAKADLDTAELDLGFTQIRAPIDGLV-GNRLA 249

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
               Y      L+ IVP S   ++ A     Q++ +  G  ATV   +     ++  K  
Sbjct: 250 QVGTYVSPGSYLLTIVPQSG-LWVDANFKEDQLRRMADGQAATV---YTDIAPDQPLKGH 305

Query: 367 IEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +  + P          +Q      T+    V ++IT        + LR G    V     
Sbjct: 306 VSSLGPATGAIFSVIPAQNATGNFTKIVQRVPVRITIDPDQARKVALRPGLSTVVTVDTG 365



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 68/197 (34%), Gaps = 6/197 (3%)

Query: 7   KNLKRNHPASLKR--MTLLSIIGIIGLITWSILLPIEIS--VSSSGEILNEDNVVEIKSP 62
             ++   PA  +R  + +L     IG+  W      +    V S+ +     NV  +   
Sbjct: 16  SAVQIPAPAKSRRKPIVMLGAAIAIGVAGWYGFQWWQAGRFVMSTDDAYVGGNVTPLAPR 75

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G I +  VE+   +  G  ++  +D      ++  + S++  +  +D  ++ +   N+
Sbjct: 76  VAGHIDQILVEDNQHVDAGQLIIRIDDRPFKAAVERARASVQQQQSALDNLRAQVSLQNS 135

Query: 123 KYDVLEKAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +  E   E++           K +   +           RSL        S+  +R  
Sbjct: 136 LIEQAEADLEAKSAAATFTTQDAKRYEVLASTRAGSQQDAQRSLAADGQAKASVSASRAG 195

Query: 181 LENKSSLLRALLSSHQK 197
           L      L  L +   +
Sbjct: 196 LAAARQQLDVLNTQISE 212


>gi|217977975|ref|YP_002362122.1| secretion protein HlyD family protein [Methylocella silvestris BL2]
 gi|217503351|gb|ACK50760.1| secretion protein HlyD family protein [Methylocella silvestris BL2]
          Length = 390

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 84/268 (31%), Gaps = 19/268 (7%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---NLFEKNAVSQNDLNQ 218
            +L      + +   N  +L N+  + RAL+   +  +   +     ++     Q DL Q
Sbjct: 117 AALDQAKATLEAAQANLDNLANQKDVQRALIRQAEATIAATQADLQRYQLELKRQQDLLQ 176

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                     E  E   ++      +N+   +        L   ++ L   +   A  + 
Sbjct: 177 TRIAGTPQLAEQAEANAKRTQAQLLLNQAQLDQQKAVLAGLDVTAKQLAAQRDAAAAAVE 236

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
              +         I+SP  G +   Q  +   +      ++ ++P   +  I A     Q
Sbjct: 237 ---LARNNLNYTRIVSPADGIVGQRQVRA-GQFVNAGAQVIAVMPLPNIWVI-ANYKETQ 291

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT 394
           + +++ G  A +    + D++       +E   P           +  T  + +V+ ++ 
Sbjct: 292 MTNMRAGQPARISVDAFPDLK---LTGHVESWSPGTGSTFALLPPDNATGNFTKVVQRVP 348

Query: 395 DLAFSDNNIEL----RNGFPAEVLFTAK 418
                D +  L    R G          
Sbjct: 349 VKIVLDPDPALGALVRPGMSVIATVDTG 376



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 47/130 (36%), Gaps = 1/130 (0%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK   V++  ++ QG  ++  +  +    +D  K +++  + ++D   +  D     
Sbjct: 87  SGYIKTVAVKDYQEVRQGDLIVEIDPSDYLAALDQAKATLEAAQANLDNLANQKDVQRAL 146

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               E    + +  L  +  +       +    I+   +  +      +      L  + 
Sbjct: 147 IRQAEATIAATQADLQRYQLEL-KRQQDLLQTRIAGTPQLAEQAEANAKRTQAQLLLNQA 205

Query: 184 KSSLLRALLS 193
           +    +A+L+
Sbjct: 206 QLDQQKAVLA 215


>gi|310764910|gb|ADP09860.1| Multidrug resistance secretion protein A [Erwinia sp. Ejp617]
          Length = 390

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 85/259 (32%), Gaps = 28/259 (10%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N    +    L +  +   Q DL   + L   N + + 
Sbjct: 99  QAFEKAQTALATSVRQTHQLIINGKQYQAAIELQKTAMEQAQADLRRREPLGAANLIGKE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L      V  +  +L   + +       I     E                  NQ    
Sbjct: 159 ALQHARDAVATAKAQLDVAMQQYNANQAMILNTTLE------------------NQPAVK 200

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              ++L     T ++ +++SPI G +   +S    +    + PL+ IVP +   ++ A  
Sbjct: 201 KSAAELRDAWLTLQRTSVVSPIDGYVSR-RSVQVGSQIGTTTPLLAIVPANH-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYAD--IREKKF------KAIIEKIDPIISQQDNNLQTQEY 386
              Q+  V+ G  ATV    Y D  +   K          +  + P  +   N ++  + 
Sbjct: 259 KETQLAGVRIGQPATVLSDIYGDDVVYHGKVVGLDMGTGSVFSLLPAQNATGNWIKVVQR 318

Query: 387 YEVILKITDLAFSDNNIEL 405
             V + +     + + + +
Sbjct: 319 LPVRIALDAQEVAKHPLRI 337



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 53/160 (33%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK------- 104
              N V++ +  +G + K   +N   + +G  L+T +  +     +  + ++        
Sbjct: 57  VAGNQVQMMAQVAGSVNKVWFDNTDFVKKGDVLVTLDRTDAGQAFEKAQTALATSVRQTH 116

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    ++A++      +  +     RE      L    +          +     +
Sbjct: 117 QLIINGKQYQAAIELQKTAMEQAQADLRRREPLGAANLIGKEALQHARDAVATAKAQLDV 176

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            M+        +    LEN+ ++ ++        LT+ + 
Sbjct: 177 AMQQYNANQAMILNTTLENQPAVKKSAAELRDAWLTLQRT 216


>gi|304309939|ref|YP_003809537.1| Secretion protein HlyD [gamma proteobacterium HdN1]
 gi|301795672|emb|CBL43871.1| Secretion protein HlyD [gamma proteobacterium HdN1]
          Length = 364

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 103/365 (28%), Gaps = 76/365 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + + + I+   +G IK   V    Q+ +G  L+  +  +        +  +       +
Sbjct: 43  VKADTIAIRPEVAGRIKAVPVHENQQVRKGDVLVQLDTSDF-------EAQLAQTNAETN 95

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++AL  +  +  + EK   +    +     +      ++                T  
Sbjct: 96  VAQAALADIGEQILLQEKKVLAANANIDAAKAELQRARVELNRAA------------TLA 143

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           R  + ++  LENK +                        V++  L+Q    +      L 
Sbjct: 144 RQDFGSKQLLENKQADTE---------------------VAKAHLDQAFAALAAEQQMLA 182

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               +Q +    I   +  A                                     + T
Sbjct: 183 VYHTKQDSAKAQIEAAHARARF-----------------------------ASHQLSKAT 213

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +   G I    +F+   YAQ  Q L+++VP  +   I A     QI  +  G    + 
Sbjct: 214 ITAASDGVIGNLAAFA-GGYAQPVQTLLQLVPIPQTYVI-ANFKETQIGRMSMGQHVKLT 271

Query: 352 FPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEY----YEVILKITDLAFSDNNIELR 406
                 I    K  ++        S    +  T  +      V +KI  +   +    LR
Sbjct: 272 VDALPGITFTGKIDSLAPATGTEFSLLPQDNATGNFNKIVQRVPVKIQVIGPMEQVHLLR 331

Query: 407 NGFPA 411
            G   
Sbjct: 332 PGLSV 336


>gi|295700084|ref|YP_003607977.1| secretion protein HlyD [Burkholderia sp. CCGE1002]
 gi|295439297|gb|ADG18466.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1002]
          Length = 366

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 55/406 (13%), Positives = 124/406 (30%), Gaps = 84/406 (20%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               + +LS++ ++ L T S    +   V ++ +     +V  +    +G +    V + 
Sbjct: 24  PWMLLAILSVLVVLALAT-SYWFFVGRFVETTDDAYVGGDVTVMAPKVNGFVTDVLVRDN 82

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +     L+  +  +           +      +++ ++A+  L  K  +   A   + 
Sbjct: 83  EFVHANQVLVRLDARDYDA-------RLAQANAEVESAQAAVTELEAKKSLQLAAINEQA 135

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            ++                       R+   +LTR  +  +   +L    ++   ++   
Sbjct: 136 AEV-----------------------RASGAELTRSAADQIRYRELVKDDAVSNQVVEKA 172

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             DLT  +   +K   S   L   +R +     ++                         
Sbjct: 173 DADLTKARAAVDK---SGAALLAAQRQIAVLDAQIG------------------------ 205

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                         +   A   +   +     E  TI SPI G +  N++      A   
Sbjct: 206 ------------DAKARIATAQAAQRVAALNVEYTTIRSPIDGYV-GNRTARVGLLANTG 252

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             L+ +VP S   +I A     Q++ ++ G +  V+              ++E + P   
Sbjct: 253 VSLLTVVPASG-LWIDANFKEDQLRKMRAGDSVEVQLDA----SSTALHGVVESLAPATG 307

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                  ++      T+    V +++      D    LR G  A V
Sbjct: 308 ATFSVLPAENATGNFTKIVQRVPVRVRLDVPKDMQGVLRPGLSATV 353


>gi|62181318|ref|YP_217735.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62128951|gb|AAX66654.1| multidrug resistance secretion protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
          Length = 399

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 108 QAFEKAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 167

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 168 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 220

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 221 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 267

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   T+    Y D    K+   +  +D          P  +   N ++  
Sbjct: 268 KETQLANMRIGQPVTIITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 325

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 326 QRLPVRVELDARQLEQHPLRI 346



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 66  VAGNQVQITAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFEKAKTALASSVRQTH 125

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 126 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 185

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 186 AIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERT 225


>gi|310659849|ref|YP_003937570.1| hypothetical protein CLOST_2550 [Clostridium sticklandii DSM 519]
 gi|308826627|emb|CBH22665.1| protein of unknown function [Clostridium sticklandii]
          Length = 402

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 74/200 (37%), Gaps = 26/200 (13%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           ++    L   LS   ++L     L++  A+   +L      V      L + +   K  L
Sbjct: 125 QSDIEKLELELSQQARELERKTALYDSGAIPLIELEA----VTDKVNLLNKQLESAKLTL 180

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                   EA        K+ S  +EQ++         L  LE++  + +  SPIAGTIV
Sbjct: 181 NSYAPGGSEA--------KKASASIEQSRVA-------LKNLEQSFGKYSYSSPIAGTIV 225

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +   + Q  Q LMKIV      Y + +V  K I  V  G  A +    Y      
Sbjct: 226 ELNV-TEGEFVQPGQTLMKIVDLDDK-YAQIEVDEKSITKVFVGQKAFI----YPSSDTS 279

Query: 362 -KFKAIIEKIDPIISQQDNN 380
            K +  + +ID  +  +   
Sbjct: 280 LKLETTVREIDKSVDSEKGT 299



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 72/212 (33%), Gaps = 17/212 (8%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEIS-------------VSSSGEILNEDNVV 57
           +++   +K + +  I+ +I    +      +               V +SG +       
Sbjct: 2   KDNKKLIKNLVIAIILFVILFFGYKFFTKPKEVGYVGLTKSSYQETVLASGRVE-AGESR 60

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSA 116
            + S  +  +    V  G  + Q T L+  +  + +  I+  K S+ +   +      ++
Sbjct: 61  IVTSEVASRLISLLVNEGDAVNQNTLLVKLDSSDLSKNINEAKASVGSASANYNKIVTTS 120

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            +   +  + LE     +  +L      Y S    +    + +V   + +   ++ S  L
Sbjct: 121 YEIAQSDIEKLELELSQQARELERKTALYDSGAIPLIE--LEAVTDKVNLLNKQLESAKL 178

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
                    S  +   +S ++    +KNL + 
Sbjct: 179 TLNSYAPGGSEAKKASASIEQSRVALKNLEQS 210


>gi|238759756|ref|ZP_04620914.1| hypothetical protein yaldo0001_9510 [Yersinia aldovae ATCC 35236]
 gi|238701988|gb|EEP94547.1| hypothetical protein yaldo0001_9510 [Yersinia aldovae ATCC 35236]
          Length = 321

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 91/253 (35%), Gaps = 17/253 (6%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-LNQQERIVYKS 226
           L   +    N  + + + +LL+A     +      +    + A S  D   ++++ ++ S
Sbjct: 74  LNAFKQAQANVQNAQAQLALLKAGYRDEEIAQVRSEVSQREAAFSYADSFLKRQQGLWAS 133

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEK 285
                  +   +            +  + A YL     +++ Q +   A   ++L   + 
Sbjct: 134 KATSANELENARTARNQAQANLQASKDKLAQYLSGNRPQEIAQAEANLAQSEAELAQAQL 193

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                T+LSP AGT++  ++         S  +  +   +   ++RA V+   +     G
Sbjct: 194 NLHDTTLLSPSAGTVLT-RAVEPGTILSASNTVFTLS-LTHPVWVRAYVSEPHLSLAIPG 251

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSD 400
               V F       +K +   +  + P       + +  +L+T   Y + + ITD     
Sbjct: 252 TQVEV-FT--DGRPDKPYHGKVGFVSPTAEFTPKTVETPDLRTDLVYRLRIIITDA---- 304

Query: 401 NNIELRNGFPAEV 413
            +  LR G P  V
Sbjct: 305 -DESLRQGMPVTV 316


>gi|149279007|ref|ZP_01885141.1| putative HlyD family secretion protein [Pedobacter sp. BAL39]
 gi|149230286|gb|EDM35671.1| putative HlyD family secretion protein [Pedobacter sp. BAL39]
          Length = 389

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 64/216 (29%), Gaps = 27/216 (12%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ--------- 268
           Q    +    ++   +  +        NE Y  AN      L E                
Sbjct: 85  QLLAELDPILIQATVDQAKASLTQAQSNERYQAANFNRQKQLFETGSISRADYDLSLNNH 144

Query: 269 --NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
              + T  +  ++L   E+      I SPI G ++             S     +  I  
Sbjct: 145 QVAKATVDNARAQLKSAERNLSFTKIYSPIDGVVLGRSVN-IGQTVAASFNTPTIFTIAK 203

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 + AKV    I  V KG  AT     + D     FK  ++     +  Q +    
Sbjct: 204 DITKMQVEAKVDEADIGEVVKGQHATFTVDAFIDDT---FKGTVK----DVRLQPSISSN 256

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              Y  ++        +++ +L+ G  A ++   K 
Sbjct: 257 VVTYSTLIDAP-----NDDKKLKPGMTANIVIFTKQ 287



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 5/129 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I +SV+++G I   D V  + +  SG I     +  S + +G  L   + I     +D
Sbjct: 42  GKISLSVTATGTIQPVDTV-TVGTQVSGTISALYADFNSTVKKGQLLAELDPILIQATVD 100

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE-QLLDFLGKYHSTCSKVFNYG 156
             K S+   + +   E+      N +  + E    SR +  L     +            
Sbjct: 101 QAKASLTQAQSN---ERYQAANFNRQKQLFETGSISRADYDLSLNNHQVAKATVDNARAQ 157

Query: 157 ISSVYRSLK 165
           + S  R+L 
Sbjct: 158 LKSAERNLS 166


>gi|21114753|gb|AAM42759.1| multidrug resistance efflux pump [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572341|gb|AAY47751.1| multidrug resistance efflux pump [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 390

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 91/306 (29%), Gaps = 29/306 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V + A   R + L     + ++   +     + +   +L     +  S      +  
Sbjct: 104 QVPVQDFAHVRRGQLLAKIDDRIYAQHLEQAKAQLQTTQANLANWEQQRHSAEATIAEQR 163

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  +A     +      + L  +  VS+ D               R+     +    
Sbjct: 164 ATLSSNQAQRDRTRSAYARAQQLANQKLVSEQD---------------RDTAFAARAQAD 208

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                   A        + ++ +    +   A+  + + + +   +   IL+P  G +  
Sbjct: 209 AGVAQARAAVQAAEENARSVTVNRAALEAAVANAQAAVQLAQINLDNTRILAPRDGQLGQ 268

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP     ++ A     Q+ +V+ G  A+      A+ R   
Sbjct: 269 LGVR-QGAYVTNGTQLMALVP--DTLWVVANFKETQMANVRVGQRASFTVDALANAR--- 322

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVL 414
            +  +++I P    +      +  T  + ++     L+I+          LR G    V 
Sbjct: 323 LQGRVQEISPAAGSEFSVLRADNATGNFVKIAQRIPLRISVDPGQPQAARLRPGMSVVVA 382

Query: 415 FTAKNT 420
                 
Sbjct: 383 IDTAQR 388



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 52/146 (35%), Gaps = 9/146 (6%)

Query: 23  LSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           L++IG+  L+ ++  L P   +V  +   +    V  I    SG + +  V++ + + +G
Sbjct: 58  LALIGV-ALVLYAWRLPPFTSAVERTENAMVHGQVTVIAPQVSGYVTQVPVQDFAHVRRG 116

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L   +D        +    ++  +  + T ++ L     +    E     +   L   
Sbjct: 117 QLLAKIDD-------RIYAQHLEQAKAQLQTTQANLANWEQQRHSAEATIAEQRATLSSN 169

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMK 167
             +   T S        +  + +  +
Sbjct: 170 QAQRDRTRSAYARAQQLANQKLVSEQ 195


>gi|319939511|ref|ZP_08013871.1| ABC transporter accessory protein [Streptococcus anginosus
           1_2_62CV]
 gi|319811497|gb|EFW07792.1| ABC transporter accessory protein [Streptococcus anginosus
           1_2_62CV]
          Length = 453

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 59/418 (14%), Positives = 132/418 (31%), Gaps = 39/418 (9%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S +   E+++ S GEI     +  I+S  +  I    +     +++G  L+ +      +
Sbjct: 38  SFIGQKEVTIKSIGEITPTKVIAMIQSSSNNTILINHLAENKAVVKGELLIQY----AKN 93

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           +   ++ +IK        +K  ++ L +        F   +E             S+  +
Sbjct: 94  MEVSQQTAIKTQLATYQRQKVGIETLKSSLHQGINLFSGEDEFGYANTFNNFIKQSQDLS 153

Query: 155 YGIS----SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK------- 203
            GIS     V +   +    + +I     DL  + +  R L     ++ + +        
Sbjct: 154 LGISKSNIEVSKQASLAHNTIAAIDQQINDLTKQINDYRELHQVISENASHLSKSNPHQT 213

Query: 204 --NLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHI-------NELYDEA 251
             N+++K   +  D    NQ    +  +   L  +I   K             N L  + 
Sbjct: 214 TFNMYKKQYQANPDTSLTNQYLSQIDTNISNLNSSIANLKIQKAGTGTAATYDNSLSTKI 273

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +    +++   + L        D  ++L       +   +++P  G +  ++    +N 
Sbjct: 274 EVLRTQFIQTADQQLATLMTQITDLQNQLNQANVQLQNNRLVAPETGVLHISEKLKGNNL 333

Query: 312 AQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA-DIREKKFKAII 367
             +   + +I P    +    I   V    + ++KKG T  +                II
Sbjct: 334 LPKGTEIAQIYPDITKTNEVLIAYYVPSTYMTNLKKGQTTRLTLEKIGKQSIT-----II 388

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
             I+ I +      Q   +    +         N   ++ G    V       +    
Sbjct: 389 GNINKIDTSATETKQGNLF---KVTAKAKISKSNGQVIKYGLQGRVTIVIAKKSFFDY 443


>gi|146283430|ref|YP_001173583.1| multidrug resistance efflux pump [Pseudomonas stutzeri A1501]
 gi|145571635|gb|ABP80741.1| probable multidrug resistance efflux pump [Pseudomonas stutzeri
           A1501]
          Length = 371

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 54/410 (13%), Positives = 121/410 (29%), Gaps = 85/410 (20%)

Query: 11  RNHPASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +    S+  MTL++++G++ ++  W +  P   S+ ++        +  +    +G + +
Sbjct: 29  QPSRRSIILMTLVALVGVLAILYAWQLW-PFTGSLVTTENAYVRGQLTVLAPQVAGYVTE 87

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            +V++  Q+ QG  L+  +D +        +  +   R   D  +  L+ L+ +      
Sbjct: 88  VRVQDFEQVRQGQVLVRIDDRQY-------QQRVAQRRAERDAARFELENLDQQLAADRA 140

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              +R   L  F  +     ++     +  +     + +        +           R
Sbjct: 141 TLAARRADL--FAAEAEGARARADERRVDELAERGSVSIRERDQTRASARAASANVRKAR 198

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A +                                         I EQ      I+    
Sbjct: 199 AAIE----------------------------------------IAEQTLKASGISRGGL 218

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +A +E A                     + L   E       I++P  G +         
Sbjct: 219 QARVEIAQ--------------------ATLHQAEIDLANTEIVAPGDGRVSEVGVR-LG 257

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            Y      L+ +VP     ++ A     Q  +++ G   +         R       IE+
Sbjct: 258 QYVTAGTQLLFLVPP--KLWVIANYKETQTANMRPGQPVSFEVDALNGAR---LTGRIER 312

Query: 370 IDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNN---IELRNGFPA 411
           I P    +      +  T  + +V+ ++   +A   +      LR G   
Sbjct: 313 IAPATGSEFSLLRPDNATGNFTKVVQRLPVRIAIDPDQPLLERLRPGLSV 362


>gi|293415649|ref|ZP_06658292.1| multidrug resistance protein K [Escherichia coli B185]
 gi|291433297|gb|EFF06276.1| multidrug resistance protein K [Escherichia coli B185]
          Length = 387

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 83/269 (30%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQNKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K        L    +L     + E +   ++       
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKAN----KALVMNTSLNRQPQVVEAAGATKEAWLAL-- 206

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 207 ------------KRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+I+  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAIVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQNKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 SLNRQPQVVEAAGATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|15606781|ref|NP_214161.1| hypothetical protein aq_1687 [Aquifex aeolicus VF5]
 gi|2984016|gb|AAC07560.1| putative protein [Aquifex aeolicus VF5]
          Length = 480

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 63/398 (15%), Positives = 121/398 (30%), Gaps = 86/398 (21%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            +  L++   + L+ W+   P   SV +        NVV + +P+  I++K  V+ G ++
Sbjct: 153 LLIALALAFGLYLVFWA--TPKAYSVDA----FYSGNVVSLITPWEAILEKVYVKEGDEV 206

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +   L                         I+ EK     +  +               
Sbjct: 207 RKNQVLFK--------------------TSRIEDEKDGYGGVGVR--------------- 231

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                                + R     L  +         L+ +    R  L S + +
Sbjct: 232 ---------------------ILRDRAAILREIEKTKNKIALLDERIKATRFRLRSLKVE 270

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L   K+ FE   +S++    +E    +  L LRE   E+    R++  LY          
Sbjct: 271 LEKAKSAFELGYISRSVYEDKENEYKELLLSLRELEKEKSADERYLAFLYT--------- 321

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
                       +      +     ++    +   +P  G ++               P+
Sbjct: 322 ----------LLKELGSFYAGGGGGDEEDNFEIYRAPFDGIVLSVYYL-EGQILTPGMPV 370

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M I    K  Y+ A+   + + ++  G  A V FP      EK  +  +  I       +
Sbjct: 371 MVIESLEKKGYVIARFKKRDVLYINVGDKARVYFP----SIEKTVEGKVIAIGKKALGDE 426

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           + +   E Y +      +   +   EL +G  AEV  T
Sbjct: 427 SMISESEEYALPDVPVKIELFEYPQELHHGIKAEVEIT 464


>gi|251771770|gb|EES52345.1| efflux transporter, RND family, MFP subunit [Leptospirillum
           ferrodiazotrophum]
          Length = 313

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 91/277 (32%), Gaps = 9/277 (3%)

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           H       N G S++         R+ +       + ++ +                 +L
Sbjct: 32  HGKRPLAPNVGASALPDGRVAAEGRLMACPDAIATVRSEYAGTIEDYPVRDHQRVKKGDL 91

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
                 S  DL  +           +  +  +KN       L+ +    FA+Y +   + 
Sbjct: 92  LASLHAS--DLEARLAEARAGLAMEQARLALEKNRFHRARRLWAKKATSFASYDR-ARKT 148

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L+  +       + + ++E    +  I SP+ GT+V  +  +   Y      +   V   
Sbjct: 149 LDMVEAQLERSQADVRLIESLFAKTRIRSPLDGTVVA-RFHNRGEYVNVGSRIAT-VADL 206

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
             T + A+V    I HV+ G  AT+R    +        +I +++       D+  +  +
Sbjct: 207 SRTRVEAEVDEFDIGHVRVGAPATLRAEGLSRRYSGVVVSISDRVTRKHLIPDDPSRPTD 266

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
              V ++I     S + +  R G   +V      T  
Sbjct: 267 TGVVRVRI----VSPSPLPFRLGQKVDVRIGTGRTVP 299



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 62/192 (32%), Gaps = 19/192 (9%)

Query: 41  EISVSSSGEILN-EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  V++ G ++   D +  ++S ++G I+ + V +  ++ +G  L +    +    +   
Sbjct: 48  DGRVAAEGRLMACPDAIATVRSEYAGTIEDYPVRDHQRVKKGDLLASLHASDLEARLAEA 107

Query: 100 KVSIKNLRCHIDTEKSALDFLN----------NKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +  +   +  +  EK+                  YD   K  +  E QL           
Sbjct: 108 RAGLAMEQARLALEKNRFHRARRLWAKKATSFASYDRARKTLDMVEAQLERSQADVRLIE 167

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLN---RLDLENKSSLLRALLSSHQKDLTMMK--- 203
           S      I S      +     R  Y+N   R+      S  R      + D+  ++   
Sbjct: 168 SLFAKTRIRSPLDGTVVARFHNRGEYVNVGSRIATVADLSRTRVEAEVDEFDIGHVRVGA 227

Query: 204 --NLFEKNAVSQ 213
              L  +    +
Sbjct: 228 PATLRAEGLSRR 239


>gi|168698229|ref|ZP_02730506.1| hypothetical protein GobsU_01817 [Gemmata obscuriglobus UQM 2246]
          Length = 668

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 66/471 (14%), Positives = 146/471 (30%), Gaps = 97/471 (20%)

Query: 39  PIEISVSSSGEILNEDNVVEI---KSPFSGIIKKFQ--VENGSQILQGTPLLTFEDIETT 93
           P+ ++V+  G + + DN   +   ++   G        +++GS++  G  L+  +D    
Sbjct: 67  PLVVTVAEKGTLESADNRDIVCKVRAGSKGFASTINWVIDDGSRVKPGQLLMILDDSALK 126

Query: 94  DLIDLKKVSIKNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDF----------- 141
           D  + +++ +     + I  E      +      +E A  +     +D            
Sbjct: 127 DQEEEQQIKVDTASANKIKAENDYDIVVKQNEIAVETAKNALALAEIDLEKFTGLNYDPT 186

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           LG        + +   +  +R L    T    +  + L+   + +     +         
Sbjct: 187 LGALAVVGGGMASLSETGSFRQLVDDQTGQVKLAESNLEQYRERAAWSDRMVKLSYMSAA 246

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTL--ELRENIHEQKNMLRHINELYDEANLEFANYL 259
                     S  +  + +R      L  + ++ + + ++        Y++A L+    L
Sbjct: 247 QAQAERSKMESAVEDLRSKRAKLAQMLSYDRKQQLTDFRSKRTSALLAYEQAVLQADANL 306

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP----IAGTIVYNQS---------- 305
            +   + ++    F  +  K   +   R +  I +P        +VY +S          
Sbjct: 307 AKALAEKKRATSEFIQQDEKQREISLQRAECKITAPSDIEPDSMVVYFRSESNRFGSSSS 366

Query: 306 ---FSSSNYAQQSQPLMKIVPHSKLTYIRAKV---------------------------- 334
                     ++ Q L++I P+     +  KV                            
Sbjct: 367 QGLIEQGAQVKEGQKLLRI-PNLHRMQVNTKVHEAMVARIRGDVRVPTHLVDGFQAVMLL 425

Query: 335 -----------TPKQIQHVKK------------GYTATVRFPHYADIREKKFKAIIEKID 371
                          I  V++            G  ATVR     D +   F+  +  + 
Sbjct: 426 NTDPFGRLVGQRSDLIDRVREKFRNQEYKKLADGQRATVRVDALPDRQ---FEGHVRTVS 482

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDN------NIELRNGFPAEVLFT 416
            + SQ D+ +   + Y+ ++ I    F D       N +L+    AEV  T
Sbjct: 483 AVASQADSWISDVKLYQTLVMIDSEVFPDGTKKRIENEQLKPDMTAEVTIT 533


>gi|91784637|ref|YP_559843.1| major facilitator superfamily multidrug efflux pump membrane fusion
           protein [Burkholderia xenovorans LB400]
 gi|40019163|emb|CAE92887.1| putative multidrug efflux pump [Pseudomonas putida]
 gi|91688591|gb|ABE31791.1| MFS multidrug efflux pump, membrane fusion protein, EmrA subfamily
           [Burkholderia xenovorans LB400]
          Length = 344

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/340 (13%), Positives = 96/340 (28%), Gaps = 34/340 (10%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                   +      ++         +  +  K  V E       + L     +      
Sbjct: 28  RPESSASTQSTDDAYVQADFTLVAPQVSGVIGKVLVEENQPVKAGDLLAAIDDRDFIVAV 87

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 +++   S+     R+          +   ++  A L   + +    +NL    +
Sbjct: 88  DAAKAQVAAAKASVAGLAARVAQQETAIRQAQATVAVDDAELKLAEANQRRYRNLASDGS 147

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQN 269
            S                       E +  +R  +   + A L+ A    +I   DLE+ 
Sbjct: 148 GSIQ----------------ARQQAEAQLAIRLASRDRNRAGLQAARQQTDILKADLEKA 191

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   +   +     E       I +PI+G I   +S     +    +PL+ ++P     Y
Sbjct: 192 KAALSQAQAAQDAAELKLSYTQITAPISGLI-GQKSVRVGAFVNAGKPLVAVIPLD-AVY 249

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQE 385
           I A     Q+  V+ G +  ++            K  +E + P      S    +  T  
Sbjct: 250 ITANFRETQLARVQPGQSVDIKVDALPGA---VLKGTVESLGPASGVSYSAVAPHNATGN 306

Query: 386 YYE------VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + +      V ++I        N+ +  G           
Sbjct: 307 FTKIVQRLPVRIRIDPDQPGAANLRV--GMSVTPRIHIGE 344



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 48/141 (34%), Gaps = 2/141 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    SG+I K  VE    +  G  L   +D +    +D  K  +   +  +    + + 
Sbjct: 50  VAPQVSGVIGKVLVEENQPVKAGDLLAAIDDRDFIVAVDAAKAQVAAAKASVAGLAARVA 109

Query: 119 FLNNKYDVLEK--AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                    +   A +  E +L +   + +   +   +  I +  ++      R+ S   
Sbjct: 110 QQETAIRQAQATVAVDDAELKLAEANQRRYRNLASDGSGSIQARQQAEAQLAIRLASRDR 169

Query: 177 NRLDLENKSSLLRALLSSHQK 197
           NR  L+        L +  +K
Sbjct: 170 NRAGLQAARQQTDILKADLEK 190


>gi|293394752|ref|ZP_06639043.1| multidrug resistance protein A [Serratia odorifera DSM 4582]
 gi|291422703|gb|EFE95941.1| multidrug resistance protein A [Serratia odorifera DSM 4582]
          Length = 390

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 87/244 (35%), Gaps = 20/244 (8%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK------STLELR 231
           +   E   + L   +    + +   K      A+ + DL++ E  + +      +    R
Sbjct: 98  QQAFERAKTALANSVRQTHQLIINSKQYQANIALRKTDLSKAENDLKRRVILGNADAIGR 157

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E +   ++ +       D A  ++      +     + Q       +++       ++ +
Sbjct: 158 EELQHARDAVASAKAALDVAVQQYNANQAMVLDTPLEQQPAIKQAAAQMRDAWLALQRTS 217

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I+SPI G +   +S           PLM +VP     ++ A     QI +++ G +ATV 
Sbjct: 218 IISPITGYVSR-RSVQVGAQIAAGSPLMAVVPADH-VWVDANFKETQIANMRIGQSATVV 275

Query: 352 FPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDN 401
              Y D     +   +  ID          P  +   N ++  +   V +++     +D+
Sbjct: 276 SDVYGDDV--VYHGKVVGIDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDAKQIADH 333

Query: 402 NIEL 405
            + +
Sbjct: 334 PLRI 337



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 60/160 (37%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-- 109
              N V+I +  SG + +   +N   + QG  L+T +  +     +  K ++ N      
Sbjct: 57  VAGNQVQIMAQVSGSVNRVNFDNTDYVKQGDVLVTLDPTDAQQAFERAKTALANSVRQTH 116

Query: 110 ---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              I++++   +    K D+ +   + +   +L           +     ++S   +L +
Sbjct: 117 QLIINSKQYQANIALRKTDLSKAENDLKRRVILGNADAIGREELQHARDAVASAKAALDV 176

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
            + +  +     LD  LE + ++ +A        L + + 
Sbjct: 177 AVQQYNANQAMVLDTPLEQQPAIKQAAAQMRDAWLALQRT 216


>gi|197118584|ref|YP_002139011.1| RND family efflux pump membrane fusion protein [Geobacter
           bemidjiensis Bem]
 gi|197087944|gb|ACH39215.1| efflux pump, RND family, membrane fusion protein [Geobacter
           bemidjiensis Bem]
          Length = 419

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 72/258 (27%), Gaps = 56/258 (21%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           L+ ++    N L+ E   +  R  L+  ++     K L  +  ++Q+DL+  +     + 
Sbjct: 92  LSAVQQSRGNALNAEASLAKARVTLADAKRTYNRNKALLVEGIIAQSDLDAAQTAYDAAL 151

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             +R                                      +         L   E   
Sbjct: 152 TGVRG------------------------------------AEAVLLQTRGALRQAETNL 175

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
              TI SP+ G +V             S     L  I        I   +    I  +K 
Sbjct: 176 NYATIKSPVDGIVVSRNVD-VGQTVAASFQTPTLFTIAQDLTKMQIDTSIDESDISRLKV 234

Query: 345 GYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           G  A      Y +     F+  + +I   P+++Q          Y  ++ +      +  
Sbjct: 235 GQKAEFTVDAYPEQT---FEGTVVQIRNAPVVTQNVVT------YVAVIGVD-----NRQ 280

Query: 403 IELRNGFPAEVLFTAKNT 420
           + L+ G  A V       
Sbjct: 281 LLLKPGMTANVAVQTMRK 298



 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 32/114 (28%), Gaps = 2/114 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I K  V+  SQ+ +G P+   +       +   + +  N    +   +  L      
Sbjct: 63  SGTIAKLYVDFNSQVKKGQPIAQIDPALFLSAVQQSRGNALNAEASLAKARVTLADAKRT 122

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           Y+  +           D       T       G+      L      +R    N
Sbjct: 123 YNRNKALLVEGIIAQSDLDAA--QTAYDAALTGVRGAEAVLLQTRGALRQAETN 174


>gi|307306821|ref|ZP_07586562.1| polysaccharide export protein [Sinorhizobium meliloti BL225C]
 gi|306902112|gb|EFN32710.1| polysaccharide export protein [Sinorhizobium meliloti BL225C]
          Length = 476

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/202 (10%), Positives = 63/202 (31%), Gaps = 7/202 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            L+ L+ +++   +  ++ E    + +     ++ +  +     L++           +F
Sbjct: 201 SLLGLENINLLARKARLEAELKHANKIEFPGSLISRQDDRAVTLLME-------QERSIF 253

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                 +   ++        +    + L+ +       ++  QK+L  + +L  K   + 
Sbjct: 254 QARREGLETQIRALENLRAFLEKELISLDKQLVFHDRQIALIQKELGDVSSLVSKGLAAA 313

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
                 ER + +   E            + I++           Y+ E++  L   Q   
Sbjct: 314 PREMSLERALAQYQSERLAGETSLLRTRQEISKTEISILELRNRYVNEVTATLRLTQAEL 373

Query: 274 ADEMSKLTILEKTREQKTILSP 295
                K     +   +  I +P
Sbjct: 374 DALGRKAETAIELLHESEISAP 395


>gi|194445068|ref|YP_002042059.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194403731|gb|ACF63953.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
          Length = 390

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 99  QAFERAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 159 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 211

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 212 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   TV    Y D    K+   +  +D          P  +   N ++  
Sbjct: 259 KETQLANMRIGQPVTVITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 316

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 317 QRLPVRVELDARQLEQHPLRI 337



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFERAKTALASSVRQTH 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 117 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 176

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 177 AIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERT 216


>gi|187735875|ref|YP_001877987.1| secretion protein HlyD family protein [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425927|gb|ACD05206.1| secretion protein HlyD family protein [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 340

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 99/263 (37%), Gaps = 12/263 (4%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             + +V         R  +    +  L  K+      ++  + ++   +       +   
Sbjct: 72  ATLETVRLRQAADEARQIAEAARQNYLRVKNGPRAEEIAQARANVQAAEATLNNAGMRSK 131

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L         S  E  + +  ++    +++    +  L  A   +E   D+ Q    + 
Sbjct: 132 RLEALAETKSISRQEADDAVASRQVAAANLDVARKQLELLLAGSREE---DVAQALAQYN 188

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              + LTI E+  +   + +P  G +V N+     + A   +P+  I   +   ++RA +
Sbjct: 189 QAKASLTIREQNLKDAVLYAPGNG-VVRNRILEKGDMASPQKPVYNIS-LNHTKWVRAYL 246

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILK 392
           T  Q+  VK G++ATVR   + D   K     I  +     +  +  +L+T   YEV + 
Sbjct: 247 TESQLGKVKPGFSATVRNDSFPDTGFKGTVGFISSVAEFTPKNVETPDLRTALVYEVRII 306

Query: 393 ITDLAFSDNNIELRNGFPAEVLF 415
           + D    DN + L  G PA V  
Sbjct: 307 VDDP---DNRLRL--GAPATVTI 324


>gi|21674170|ref|NP_662235.1| membrane fusion efflux protein, putative [Chlorobium tepidum TLS]
 gi|21647331|gb|AAM72577.1| membrane fusion efflux protein, putative [Chlorobium tepidum TLS]
          Length = 422

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 87/254 (34%), Gaps = 31/254 (12%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           + +   +L    +  +    +   +  L + K    ++  ++  + + E    K+ +  +
Sbjct: 85  QEVKAGQLLFRIQPDIYVNQVKQSRAQLNLSK---AQSMEAKARMLKAEDDFRKADILYK 141

Query: 232 EN-IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +  I +   +    N     A  + A Y       ++QNQ        +LT       + 
Sbjct: 142 DKLISQTDWLSAKTNAETSRAAWKAARY------SIDQNQSLLDQNEERLT-------KT 188

Query: 291 TILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            + SPI GTI+   S                ++KI     +   + +V    I +V+ G 
Sbjct: 189 VVRSPINGTIISLSSKPGERVVGTGQFPGTEVLKIANLDNMLL-KVEVNENDIVNVQVGN 247

Query: 347 TATVRFPHYADIREKKFKAIIEKID-PIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
             TV    + D     FK  + +I     +Q  N  +    +EV +KI      ++   L
Sbjct: 248 PVTVTVDAFGDRT---FKGEVSEIANSAKTQAANTQEEATNFEVKIKI-----LNHQRLL 299

Query: 406 RNGFPAEVLFTAKN 419
           + G         + 
Sbjct: 300 KPGMSGTANIETQR 313



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 8/135 (5%)

Query: 43  SVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           +V+++G+I  E  V    SP  SG I +  V  G ++  G  L   +     + +   + 
Sbjct: 53  TVTATGKIQPETEVAM--SPDVSGEIIELPVVEGQEVKAGQLLFRIQPDIYVNQVKQSRA 110

Query: 102 SI-----KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            +     +++       K+  DF        +K     +        +      K   Y 
Sbjct: 111 QLNLSKAQSMEAKARMLKAEDDFRKADILYKDKLISQTDWLSAKTNAETSRAAWKAARYS 170

Query: 157 ISSVYRSLKMKLTRM 171
           I      L     R+
Sbjct: 171 IDQNQSLLDQNEERL 185


>gi|320173459|gb|EFW48658.1| Multidrug resistance protein A [Shigella dysenteriae CDC 74-1112]
          Length = 390

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVAAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 32  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 85  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 144

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 145 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 204

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 205 EVRNAWLALERT 216


>gi|293393144|ref|ZP_06637459.1| HlyD family secretion protein [Serratia odorifera DSM 4582]
 gi|291424290|gb|EFE97504.1| HlyD family secretion protein [Serratia odorifera DSM 4582]
          Length = 323

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 61/409 (14%), Positives = 134/409 (32%), Gaps = 110/409 (26%)

Query: 17  LKRMTLLSIIGIIGLITWSILLP-------IEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +K+ TL +++ ++ +I  ++L         ++  V +  E++             G + +
Sbjct: 1   MKKKTLFTLLLVVIVIAMAVLFRAHNQYLLLQGEVDAP-EVIVASKAK-------GRVIE 52

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             VE G  +  G  ++  +  E              L   + + +++ D           
Sbjct: 53  RLVERGDDVKSGQLMIQLDSPE--------------LMAQLRSAQASRD----------- 87

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                                       + + +SL            +  +L    +  +
Sbjct: 88  -------------------------EAKAQLEQSLHGTREE------SIRNLRASLAQAQ 116

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L + Q+D    +++  K  VS+++L+   R    +    ++ +  + N+   IN    
Sbjct: 117 AELRNAQRDYDRNQSVAAKGYVSRSELDNSRRARDSAY---QQVLAAKANLDEGINGDRI 173

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E   ++A  L+    +L + +    D                + +P+ G +    +    
Sbjct: 174 ELRQQYAAALRAAEENLLEVKAQTDDL--------------QVKAPVDGEVGPIPA-EVG 218

Query: 310 NYAQQSQPLMKI--VPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFPHYADIREKKFKAI 366
                S PL+ +  VP         +   + I  HV+KG   ++R P   D   K  +A 
Sbjct: 219 ELLNASSPLLTLIRVP-DAYFVFNLR---EDILAHVRKGDKVSLRVPALQD---KTIEAE 271

Query: 367 IEKIDP--IISQQDNNLQTQEY----YEVILKITDLAFSDNNIELRNGF 409
           +  I P    + +     T ++    +EV L             LR G 
Sbjct: 272 VRYIAPLGDYATKRATRATGDFDLKTFEVRLYPAQPVEG-----LRPGM 315


>gi|224536001|ref|ZP_03676540.1| hypothetical protein BACCELL_00865 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522394|gb|EEF91499.1| hypothetical protein BACCELL_00865 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 344

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 63/203 (31%), Gaps = 17/203 (8%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + I     L ++ +    K  L    + Y     E  +          + Q    
Sbjct: 84  RVAKGQLIATVDPLSMQSSYDAAKASLAQAEDAYRRMK-ELYDKGSLPEIKWVEVQSKLQ 142

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              S   +  K  +   + +P +G I   +            P++K+V  +    ++  V
Sbjct: 143 QAKSMEEVARKNLDDCKLYAPFSGIISE-KMAEVGQNIMPGLPVVKLV-TANQLKVKIAV 200

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
              +I  +  G  AT+            F   + +   + +    +      Y+V +++ 
Sbjct: 201 PETEIAAIATGQKATITVSALNGR---VFAGTVTEKGIVANPLSRS------YDVKIRVD 251

Query: 395 DLAFSDNNIELRNGFPAEVLFTA 417
           D        EL  G   E + + 
Sbjct: 252 DADK-----ELMPGMVVEAVLSG 269



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 1/81 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I+ +   SG +  E N   +     G +K   V  G ++ +G  + T + +      D
Sbjct: 46  SEIDGTERFSGTVE-EANSTSLSFSIMGTVKTVHVGLGDRVAKGQLIATVDPLSMQSSYD 104

Query: 98  LKKVSIKNLRCHIDTEKSALD 118
             K S+          K   D
Sbjct: 105 AAKASLAQAEDAYRRMKELYD 125


>gi|332880164|ref|ZP_08447846.1| hypothetical protein HMPREF9074_03613 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332681923|gb|EGJ54838.1| hypothetical protein HMPREF9074_03613 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 326

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 54/277 (19%), Positives = 98/277 (35%), Gaps = 39/277 (14%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            G       +V       +Y        ++RSI   R D+  + +  R  ++  + +   
Sbjct: 81  EGDLLEQGQQVGYVDSIQLYLKKCQLEAQVRSIGSRRADVAKQVAATREQIAKAELERKR 140

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             NL  +NA +Q  ++  E  +     +L   +       + + E  D A ++       
Sbjct: 141 SLNLLAQNAGTQKQVDDVESQLAVLKKQLEAQLSTLNLGNQGVTEEGDAAEIQIRQ---- 196

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
                                +E   E+  I+SPI+GT++  +         Q +PL K 
Sbjct: 197 ---------------------IEDQLEKCRIVSPISGTVLT-KYAERGEVTAQGKPLFK- 233

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQ 376
           V   K  ++RA V+  Q+  VK G T  V +  Y     K++K  I  I         + 
Sbjct: 234 VADMKHVFLRAYVSGDQLSTVKLGQTVKV-YADYGAEDRKEYKGKITWISGQAEFTPKTI 292

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           Q  + +    Y V + + +         L+ G   EV
Sbjct: 293 QTRDERANLVYAVKIAVENDGL------LKLGMYGEV 323



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 58/172 (33%), Gaps = 9/172 (5%)

Query: 28  IIGLITWSILLPIEISVS---SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           I G+  W +L     + +   ++G  + E   V + S  +G I    +E G  + QG  +
Sbjct: 34  ICGVALWGLLAACSGTDTDFDATG--IFESTEVIVSSEANGKIMALNLEEGDLLEQGQQV 91

Query: 85  LTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
              + I+       ++ +  SI + R  +  + +A      K ++  K   +   Q    
Sbjct: 92  GYVDSIQLYLKKCQLEAQVRSIGSRRADVAKQVAATREQIAKAELERKRSLNLLAQNAGT 151

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             +     S++       +   L       + +       E +   +   L 
Sbjct: 152 QKQVDDVESQLAVLK-KQLEAQLSTLNLGNQGVTEEGDAAEIQIRQIEDQLE 202


>gi|326624548|gb|EGE30893.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 399

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 108 QAFERAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 167

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 168 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 220

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 221 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 267

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   T+    Y D    K+   +  +D          P  +   N ++  
Sbjct: 268 KETQLANMRIGQPVTIITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 325

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 326 QRLPVRVELDARQLEQHPLRI 346



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 66  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFERAKTALASSVRQTH 125

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 126 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 185

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 186 AIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERT 225


>gi|302385092|ref|YP_003820914.1| efflux transporter, RND family, MFP subunit [Clostridium
           saccharolyticum WM1]
 gi|302195720|gb|ADL03291.1| efflux transporter, RND family, MFP subunit [Clostridium
           saccharolyticum WM1]
          Length = 443

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/357 (11%), Positives = 103/357 (28%), Gaps = 63/357 (17%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G I        + S  SG +K+  V     +  G  L T +D +      L + ++   
Sbjct: 55  EGTITAGGEYRLV-SDVSGPVKEVLVRENDGVKAGDVLFTIDDKDLLHEKSLCESTLAGY 113

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  ++  +      ++  + L+                                      
Sbjct: 114 KAKLEQSRIGQVMASSPQEYLDSV------------------------------------ 137

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                      R D+  K +  +A  +         ++L+   ++S+ +  +       +
Sbjct: 138 -----------RADVAVKEADYQAAKTLS----DASQSLYSAGSISKIEWEKNRATYEYA 182

Query: 227 TL---ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           TL   + +    E +  L  +     +       + + +   L   +     + + +  L
Sbjct: 183 TLAWEQAKGRYEESRRFLESLKAGGIDETTINGRFYESVEEQL---KAQIKSQETTMEQL 239

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E   ++  + +   G I         +Y Q  +  + I        I + V      ++ 
Sbjct: 240 EDRLKKCVVAADRDGIITSLPVADI-SYIQAGETALTIS-GRGKVQIESDVLTSIAPYLS 297

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            G   TV        +   +   I ++    + +  +    + Y V +K+      D
Sbjct: 298 PGDKVTVVLQLKNQDK--IYGGTISQV-YDYASKGTSALGMDEYRVHVKMDMDEDPD 351


>gi|289679391|ref|ZP_06500281.1| secretion protein HlyD [Pseudomonas syringae pv. syringae FF5]
 gi|330975120|gb|EGH75186.1| secretion protein HlyD [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 402

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 74/204 (36%), Gaps = 20/204 (9%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   ++ + +  RA + + Q +    ++L    A+SQ
Sbjct: 101 EVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRAAVQTAQDNYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +    +  ++  +  L     L D+  +     +K  +  L Q     
Sbjct: 161 EELSHARDSLTSA----QSALNNIQQQLSTSVALVDDTVVSSHPDVKAAAAQLRQAYLAN 216

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A              + T+++P+ G +   ++       Q     M ++P     +I A 
Sbjct: 217 A--------------RSTLVAPVTGYVAK-RTVQLGQRIQPGTATMAVIPLD-QLWIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD 357
               Q+  ++ G    +    Y  
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGS 284



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 64/184 (34%), Gaps = 9/184 (4%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            ++       + L  ++ I+ L  W+           + +     NVVEI    +G +  
Sbjct: 18  PKSGKRKFMLIGLAIVVVILALGIWAWYEIYGQWSEETDDAYVNGNVVEITPLVTGTVIS 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
              ++G  +  G  LL F+  +        +VS+++   ++      +  L +  D ++ 
Sbjct: 78  IGADDGDLVHAGQVLLKFDPSDA-------EVSLQSAEANLGKVVRQVRGLYSNVDGMKA 130

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              ++   +      Y+    +    G +     L      + S      +++ + S   
Sbjct: 131 QLAAQRAAVQTAQDNYN--RRRSLAAGGAISQEELSHARDSLTSAQSALNNIQQQLSTSV 188

Query: 190 ALLS 193
           AL+ 
Sbjct: 189 ALVD 192


>gi|115375251|ref|ZP_01462516.1| efflux transporter, RND family, MFP subunit [Stigmatella aurantiaca
           DW4/3-1]
 gi|115367718|gb|EAU66688.1| efflux transporter, RND family, MFP subunit [Stigmatella aurantiaca
           DW4/3-1]
          Length = 438

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 84/268 (31%), Gaps = 30/268 (11%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE---RIVYK 225
           T  R       +       +R +    +    +++ LFE    ++      E   R V  
Sbjct: 18  TAERRNLEVVAEASGLLEPIRIVEVKSKASGEVLRVLFETGQRAEQGALLAEIDPRDVQN 77

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFAN---YLKEISRDLEQNQRTFADEMSKLTI 282
           +  +   ++   +  L  +    +      A+     +E    +       A ++   T 
Sbjct: 78  ALTQAEADLESARVTLSTVTAQRERMEALRASGVVTQQEYETAINSAATARATQVRTQTN 137

Query: 283 LEKTREQK---TILSPIAGTIVYNQSFSSSNYAQQ-------SQPLMKIVPHSKLTYIRA 332
           L+  RE++   TI +PI GTI+  +S                   L  +        +RA
Sbjct: 138 LQLARERRLDVTIRAPIGGTILS-RSVEPGQIIASATSNVSGGTTLFTMA-DLSEMQVRA 195

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           K+    I  +  G  A V    Y       F   + K++P    + N         V L 
Sbjct: 196 KIDETDIGKIYAGQPARVTLEAYPGRT---FTGNVVKVEPQAVVEQN---------VTLF 243

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              +   +    L+ G  AEV     + 
Sbjct: 244 PVLIRLKNPEGLLKPGMNAEVAIEIASR 271



 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 53/140 (37%), Gaps = 12/140 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E+   +SG +     +VE+KS  SG + +   E G +  QG  L   +  +  + +   
Sbjct: 24  LEVVAEASGLLEPI-RIVEVKSKASGEVLRVLFETGQRAEQGALLAEIDPRDVQNALTQA 82

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +++ R  + T  +  + +           E+     +    +Y +  +       + 
Sbjct: 83  EADLESARVTLSTVTAQRERM-----------EALRASGVVTQQEYETAINSAATARATQ 131

Query: 160 VYRSLKMKLTRMRSIYLNRL 179
           V     ++L R R + +   
Sbjct: 132 VRTQTNLQLARERRLDVTIR 151


>gi|150388437|ref|YP_001318486.1| RND family efflux transporter MFP subunit [Alkaliphilus
           metalliredigens QYMF]
 gi|149948299|gb|ABR46827.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
           metalliredigens QYMF]
          Length = 410

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 52/394 (13%), Positives = 127/394 (32%), Gaps = 91/394 (23%)

Query: 36  ILLPIEISVSSSGEI--------LNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLT 86
           I++ +E++  + G I        + +      + +  +G +    V+ G Q+  G  L+ 
Sbjct: 27  IVVEVEMAAVTQGNIAKYVEELGVVKTKNQASVYADTAGRVTDVLVKEGEQVNTGDVLVR 86

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            +              +   +  ++ ++                                
Sbjct: 87  LDS-----------QQLSRQKRELEAQR-------------------------------- 103

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                    GI + Y      +       L          ++   +   ++ +   K L+
Sbjct: 104 --------LGIIAQYNEATQSIDEKEIEKLELE-----IEVIERRIKEAKRVVENNKRLY 150

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           E  A+S  + N     +      L     + + + + I+E                    
Sbjct: 151 EAGAISYEEYNITVTSLEAEQSNLEGVQLDLELIKKPISENIS----------------- 193

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            Q +        ++  LE       I + ++GT++  ++    +Y Q   PL++I   ++
Sbjct: 194 AQYEAQLRQLDIQMEALESQSGDFVITAHMSGTVL-MKAVEKGSYVQPGVPLLEIG-DTE 251

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
           + YI + +    I +V+ G    +      D+R    +  + KI P      ++L  ++ 
Sbjct: 252 ILYIESDLLIGDIANVEVGAPVII---SNKDLRIIDLQGTVTKIHPQAFSSVSDLGIEQK 308

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               +K+ D+ F  +   LR G+  +V    ++ 
Sbjct: 309 ---RIKV-DIEFEGSVAILRPGYDLDVNIIIESK 338


>gi|302671578|ref|YP_003831538.1| RND family transporter [Butyrivibrio proteoclasticus B316]
 gi|302396051|gb|ADL34956.1| transporter RND family [Butyrivibrio proteoclasticus B316]
          Length = 539

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/360 (11%), Positives = 106/360 (29%), Gaps = 34/360 (9%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + L  IE  +S SG +          S  +  + +  V+ G ++  G  L T+++     
Sbjct: 94  ASLGTIENILSISGTVQ-SAESKTYFSDVTAPLSEINVKVGDKVAAGDTLYTYDEAALDL 152

Query: 95  LIDLKKVSIKNLRC-------------HIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
                +++IK  +                  E      +N++ D +    ++   ++ + 
Sbjct: 153 SKQTAELAIKQAKGSYNSYWSGTAAADRKYAEGLTPQQINDRLDAITAEIDALNNKITEK 212

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             + + T + +           +      +            +S        ++  +   
Sbjct: 213 TSRMNQTLTDLQKVQADINQNGIADSSENLFENGNTEYIYRTESGNKTDGAYNNPSESDR 272

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA-NYLK 260
             +L    AVSQ+ L+ Q  +      E++    +   +    + L      +       
Sbjct: 273 QMSL----AVSQSMLDVQYALSNDP--EIQGWKRQITALQEEQSHLQTGKAAQVNPGTAT 326

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                L+    T  D +SK+   ++      + S   G +                  + 
Sbjct: 327 SAKAQLDSTTLTQEDAISKIDAAKEG-----VKSDFNGVVTAVSVV-EGATVAAGAQTVT 380

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +        +  +++   +  +  G    +          K +   I KI    ++ +N 
Sbjct: 381 LANLDD-VEVSVQISKSDLPKIAIGQQVDITI------NSKPYTGEISKISGTATKNNNG 433


>gi|302873487|ref|YP_003842120.1| hypothetical protein Clocel_0585 [Clostridium cellulovorans 743B]
 gi|307688334|ref|ZP_07630780.1| hypothetical protein Ccel74_09248 [Clostridium cellulovorans 743B]
 gi|302576344|gb|ADL50356.1| hypothetical protein Clocel_0585 [Clostridium cellulovorans 743B]
          Length = 388

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 55/375 (14%), Positives = 127/375 (33%), Gaps = 39/375 (10%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI--DLKKV 101
           V + G ++    V  I   F   +++  V+ G ++ +G  L+     E   LI     + 
Sbjct: 44  VQAYG-VIKSGTVKNINVNFPTAVEEIYVKAGQKVTKGEKLVRINISEYEGLIKNKEHEA 102

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +  L          +D  N     L +   +++  L +          K   Y  ++  
Sbjct: 103 RVAQLEVQSAQNGENIDLQNETIRKLNEDLVTKQGYLNNNSSPEMIKLQKDLTYCQNAYN 162

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           ++         +        +NK S    L  S  K+    K L +       D++    
Sbjct: 163 KAKSALDANEAAAK------QNKLSSATELEESRSKEQEAFKALEDVKF----DIDTLNA 212

Query: 222 IVYKSTLELRENIHEQKNMLRHINE-LYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            + +   +++ +I + +     I      E   E  N L E    + +N           
Sbjct: 213 KLKEEIGQIQSDISKAQIQQNTITAGNVPEVQTEKLNQLNEEIALMRKNLEEA------- 265

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
             L+       + S + G ++ N         +++  L+ ++  +K   + A ++ +  +
Sbjct: 266 -FLKDGIISCDVDSAVVGDVISN----VGEAVEKNVKLLSLI-DTKQLIVEADISEEFYK 319

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            VK+G  ATV+    AD + K++   +  I   +++++            +    +   +
Sbjct: 320 DVKQG--ATVKIIPIAD-KSKEYTGKVTYIASNVTKENTES---------IIKAQITIEN 367

Query: 401 NNIELRNGFPAEVLF 415
            +  L  G    +  
Sbjct: 368 ADEFLLPGLNVNLQI 382


>gi|300697681|ref|YP_003748342.1| cation efflux system protein, CzcB or CusB protein [Ralstonia
           solanacearum CFBP2957]
 gi|299074405|emb|CBJ53955.1| putative cation efflux system protein, CzcB or CusB protein
           [Ralstonia solanacearum CFBP2957]
          Length = 388

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 60/192 (31%), Gaps = 22/192 (11%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF------ADEMSKLTILEKTR 287
           I  QK  L  +N           +   +  + ++              E++++       
Sbjct: 138 ISAQKEYLLALNTARTLQGSTMKDLQDDAQQTVQSAAGRLHVLGLTDAEIAQIRARGTPA 197

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           E   + +PI+GTIV  ++     +      LM IV  ++  +    V    I  V+ G  
Sbjct: 198 EHLILRAPISGTIVK-RNMDPGAFLNVGDSLMSIV-DTRALWFTGNVYENDIARVRIGQP 255

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            T+R   Y D     F   +  I P I    + L       V   +      + +  LR 
Sbjct: 256 ITLRTAAYPDR---AFTGTVSFIAPNIDAATHTLT------VRCDVP-----NPDGLLRP 301

Query: 408 GFPAEVLFTAKN 419
              +        
Sbjct: 302 EMYSTARIQTGQ 313


>gi|110833128|ref|YP_691987.1| multidrug resistance protein [Alcanivorax borkumensis SK2]
 gi|110646239|emb|CAL15715.1| Multidrug resistance protein [Alcanivorax borkumensis SK2]
          Length = 454

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/277 (11%), Positives = 91/277 (32%), Gaps = 9/277 (3%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +  E +     + +  +L +    R   L   +     +      + +S     + ++
Sbjct: 42  ARVRFELADPQARSPQIQLLGRVQSPRAASLTAVVTANVDSIPVRAGHRVSK--GQVLIQ 99

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           L    +          +      L +S  +  +   NL  +  +++   +  ERI    T
Sbjct: 100 LDDTEAALARDRAKAARDEAAAQLETSRLRHQSDKNNLELEKKLAKLAADNLERI---RT 156

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANY-LKEISRDLEQNQRTFADEMSKLTILEKT 286
           L  R+ + + +       +   + +L      + +   +L + +   A   ++    +  
Sbjct: 157 LRERKLVAQTQLDQAEEAQARADLSLSLRQLSVSDFGNELARMKARLASAEAQFKQAQID 216

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             + T+ +P  GT+      +     +  +PL+K+        +RA++  + +  V+KG 
Sbjct: 217 LARTTVNAPFDGTVTQVSV-APGERVRPGEPLIKLF-ADTELEVRAQIPDRYLPAVRKGL 274

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                      +        ++++    +     +  
Sbjct: 275 I-DGDLSASTQLEGYTLPLKLKRLAGDAADARGGIDG 310



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 60/186 (32%), Gaps = 15/186 (8%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V  G ++ +G  L+  +D E     D  K +       ++T +       N  ++
Sbjct: 80  VDSIPVRAGHRVSKGQVLIQLDDTEAALARDRAKAARDEAAAQLETSRLRHQSDKNNLEL 139

Query: 127 ---LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              L K      E++     +     +++     +     L + L ++            
Sbjct: 140 EKKLAKLAADNLERIRTLRERKLVAQTQLDQAEEAQARADLSLSLRQLSVSDFGNELARM 199

Query: 184 KSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQER---------IVYKSTLELR 231
           K+ L  A     Q  + + +          V+Q  +   ER         +   + LE+R
Sbjct: 200 KARLASAEAQFKQAQIDLARTTVNAPFDGTVTQVSVAPGERVRPGEPLIKLFADTELEVR 259

Query: 232 ENIHEQ 237
             I ++
Sbjct: 260 AQIPDR 265


>gi|330899134|gb|EGH30553.1| secretion protein HlyD [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 330

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 69/182 (37%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+       +  L +  +I +  W IL                IE SV++ G +    
Sbjct: 1   MKRSRHPRRALLVALCLFPVIAVCAWQILPDSKGSAATVTVTRGTIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  SG I K   + G Q+ +G  L+  +       +D    +I NL+  +  ++
Sbjct: 61  YV-DVGSQASGQIMKIHAQVGDQVKEGDLLVEIDPSTQKAKLDAASYAIDNLKAQLQEQR 119

Query: 115 SALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    K      L     +R E +     ++ +T ++V  F   I     +L+    
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEAQAALRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 AL 181



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 10/212 (4%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIFAPMSGTVVVLDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWSSTVRQILPVPPRPLDQANQGGGSPSSSRKNGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            V+L    L   +++  L     A++ F A+ 
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTAQIFFVAEK 321


>gi|302188516|ref|ZP_07265189.1| secretion protein HlyD [Pseudomonas syringae pv. syringae 642]
          Length = 402

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 75/204 (36%), Gaps = 20/204 (9%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   ++ + +  RA + + Q +    ++L    A+SQ
Sbjct: 101 EVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRAAVQTAQDNYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +    +  ++  +  L     L D+  +     +K  +  L Q     
Sbjct: 161 EELSHARDSLTSA----QSALNNIQQQLSTSVALVDDTVVSSHPDVKAAAAQLRQAYLAN 216

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A              + T+++P+ G +   ++       Q     M ++P  +  +I A 
Sbjct: 217 A--------------RSTLVAPVTGYVAK-RTVQLGQRIQPGTATMAVIPLDE-LWIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD 357
               Q+  ++ G    +    Y  
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGS 284



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 65/187 (34%), Gaps = 9/187 (4%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +   ++       + L  ++ I+ L  W+           + +     NVVEI    +G 
Sbjct: 15  QQAPKSGKRKFMLIGLAIVVVILALGIWAWYEIYGQWSEETDDAYVNGNVVEITPLVTGT 74

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +     ++G  +  G  LL F+  +        +VS+++   ++      +  L +  D 
Sbjct: 75  VISIGADDGDLVHAGQVLLKFDPSDA-------EVSLQSAEANLGKVVRQVRGLYSNVDG 127

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           ++    ++   +      Y+    +    G +     L      + S      +++ + S
Sbjct: 128 MKAQLAAQRAAVQTAQDNYN--RRRSLAAGGAISQEELSHARDSLTSAQSALNNIQQQLS 185

Query: 187 LLRALLS 193
              AL+ 
Sbjct: 186 TSVALVD 192


>gi|162449898|ref|YP_001612265.1| RND family efflux transporter [Sorangium cellulosum 'So ce 56']
 gi|161160480|emb|CAN91785.1| RND family efflux transporter [Sorangium cellulosum 'So ce 56']
          Length = 433

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 70/215 (32%), Gaps = 18/215 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V +    +Q   + KS  E  + +++Q  + +   +         A   +     +    
Sbjct: 166 VPEVRAAKQSMELAKSEAERVKQLYDQGAVPQSTWDAARTQAQNAAAQYEAAVNGIRATV 225

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  ++  +  K     T+ +P  G I   +  S   YA   + +  +V       +
Sbjct: 226 AALTSAQAQAGLASKAVSDTTVRAPFDGAIAEKRI-SVGEYASPGRVVAVVV-RDNPLRL 283

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           R  V    I H++ G   +V    + D        ++++I   +      L         
Sbjct: 284 RIDVPEADIAHIEVGKPVSVSVAAFPDRLFP---GVVKRIGASLKASSRTL--------- 331

Query: 391 LKITDLAFSDNNIELRNGF--PAEVLFTAKNTTLA 423
               +  F ++  +LR G     ++  T ++ T  
Sbjct: 332 --PVEAEFDNSEGKLRPGLFAQGQLTLTGESRTAI 364



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/157 (10%), Positives = 47/157 (29%), Gaps = 1/157 (0%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  ++  SG ++ ++      +   G++    V+ G+++ +G PL+  +          
Sbjct: 80  PLAQTLDISGTLVADETSEA-ATQVGGLVVSVAVDVGARVKKGDPLVVLDARNVALQSQA 138

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
              ++   R  +  +  A     +   V E     +  +L     +             S
Sbjct: 139 ASAAVAQARAKLALQDGASPKGIDPDQVPEVRAAKQSMELAKSEAERVKQLYDQGAVPQS 198

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +   +                 +    + L +  +  
Sbjct: 199 TWDAARTQAQNAAAQYEAAVNGIRATVAALTSAQAQA 235


>gi|194289940|ref|YP_002005847.1| multidrug resistance protein a [Cupriavidus taiwanensis LMG 19424]
 gi|193223775|emb|CAQ69782.1| Multidrug resistance protein A [Cupriavidus taiwanensis LMG 19424]
          Length = 413

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 91/298 (30%), Gaps = 28/298 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           +  + + QL+                 +      L   +  +R++Y+N   L    +L  
Sbjct: 79  SIAADDTQLVTAGQPLIQLDRADTQVALEQAEAQLAQAVREVRTLYVNNGSLAANVALRE 138

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A ++  + DL   + +    AVS  +++  +  +  +   L     +  +     ++   
Sbjct: 139 ADVAKARDDLRRRQAIAGSGAVSNEEISHAQAALKGAESALLAAREQLASNKVLTDQTTV 198

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +                         + L     +  + ++ +P+ G +   +S    
Sbjct: 199 EHHPNVQRAA------------------ANLRSAYLSFARSSLPAPVTGYVAK-RSVQVG 239

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR--------EK 361
                  PLM +VP     ++ A     QI H++ G   T+    Y              
Sbjct: 240 QRVAAGAPLMAVVPLD-QVWVDANFKEVQITHMRIGQPVTLEADVYGSRVEYHGKVAGFS 298

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   + P  +   N ++  +   V + +      D+ + +      +V    + 
Sbjct: 299 AGTGSAFSLLPAQNATGNWIKVVQRLPVRIALDPQQLKDHPLRVGLSMTVKVDVRREE 356



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 65/185 (35%), Gaps = 10/185 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV++    +G +     ++   +  G PL+  +  +T   ++  +  +      + 
Sbjct: 62  VAGNVVQVTPLVAGTVVSIAADDTQLVTAGQPLIQLDRADTQVALEQAEAQLAQAVREVR 121

Query: 112 TE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           T        A +    + DV +   + R  Q +   G   +         +     +L  
Sbjct: 122 TLYVNNGSLAANVALREADVAKARDDLRRRQAIAGSGAVSNEEISHAQAALKGAESALLA 181

Query: 167 KLTRMRS--IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
              ++ S  +  ++  +E+  ++ RA  +     L+  ++         V++  +   +R
Sbjct: 182 AREQLASNKVLTDQTTVEHHPNVQRAAANLRSAYLSFARSSLPAPVTGYVAKRSVQVGQR 241

Query: 222 IVYKS 226
           +   +
Sbjct: 242 VAAGA 246


>gi|212637408|ref|YP_002313933.1| HlyD family secretion protein [Shewanella piezotolerans WP3]
 gi|212558892|gb|ACJ31346.1| HlyD family secretion protein [Shewanella piezotolerans WP3]
          Length = 357

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 46/363 (12%), Positives = 93/363 (25%), Gaps = 79/363 (21%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V +   + +G  L   ED                 R  +   ++ L   N   
Sbjct: 52  GYVTATFVTDNQHVEKGQLLAQLED--------------NQYRAKVAQNQAMLASANADL 97

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L    + ++  +        +  ++                                 
Sbjct: 98  KTLAAQVDLQQALITQASAGVAAAEAERIRSS---------------------------- 129

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                       + L     L  KN  SQ+ +++ +     +   L E         R +
Sbjct: 130 ------------QQLNRATQLKVKNYSSQDTVDEAQAGFQSALAHLDEAKAVLVAKQREL 177

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                                L +   +     + L + +       I SP  G IV  +
Sbjct: 178 AV---------------FKSQLIEADSSVEQAQAGLALAKIQLADTQITSPFNG-IVGKR 221

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF- 363
                 Y Q  Q +  +VP     +I A     QI+H++ G   +V    +++       
Sbjct: 222 GALLGQYVQPGQAIYSLVP-DNAVWITANFKETQIEHMQPGQEVSVELDAFSNESFIGVI 280

Query: 364 ------KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD-NNIELRNGFPAEVLFT 416
                       + P  +   N  +  +   V +++      D   + +  G  A V   
Sbjct: 281 DSLAPASGAKFSLLPAENATGNFTKIVQRIPVRIRLESATSGDIQQVRIVPGLSALVKVD 340

Query: 417 AKN 419
              
Sbjct: 341 TSK 343


>gi|298292648|ref|YP_003694587.1| secretion protein HlyD [Starkeya novella DSM 506]
 gi|296929159|gb|ADH89968.1| secretion protein HlyD family protein [Starkeya novella DSM 506]
          Length = 377

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 94/315 (29%), Gaps = 21/315 (6%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            T ++ L  L+ +      A   ++ Q +             +   +      +      
Sbjct: 70  ATIRAELSGLSARVSGNVVAIPVQDYQPVRAGELLLQIDPSDYQVAVDQAEAGVAGATAT 129

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +R++       +   +   A L+S Q          ++            + + ++  EL
Sbjct: 130 LRNLDNQIALQQATIAQAEAQLASAQAKALQATQEQQRQQELLQSTFGTRQRLEQADAEL 189

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             N    +     +     + ++        ++    Q +       + L   +      
Sbjct: 190 ASNRAAVQAAEAGVRAQQAQLDV--------LTGTRPQREADLRVTEAALAGAKLRLGYT 241

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I++P  G +V  +     +Y      L+ +VP  ++  I A     Q+ HV+ G    V
Sbjct: 242 HIVAPFDG-VVGQRQVQLGDYVTTGGNLISVVPLPQVYVI-ANYKETQLTHVEAGQPVEV 299

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIE-- 404
               + D      K  +E+I P    Q      +  T  + +V+ +I      D      
Sbjct: 300 TVDTFPDE---VLKGRVERISPASGSQFALLPPDNATGNFTKVVQRIPVRVALDPGQPLL 356

Query: 405 --LRNGFPAEVLFTA 417
             LR G         
Sbjct: 357 DHLRPGMSVVTRIDT 371


>gi|296104310|ref|YP_003614456.1| hypothetical protein ECL_03973 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295058769|gb|ADF63507.1| hypothetical protein ECL_03973 [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 408

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 51/397 (12%), Positives = 115/397 (28%), Gaps = 50/397 (12%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG-I 66
           N  R   A    +      G++  I             SS E      +  + SP  G +
Sbjct: 3   NRIRAVFARHSLLKWGVAGGVLVAIVLLFFA---GMGVSSKEAFINGRISTVLSPLPGQL 59

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    +  G  +     L      +  D I         L   +                
Sbjct: 60  VLAKNIAPGQAVRARQSLGNVVTTQANDQIPGLVAQRSALEIQL---------------- 103

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                     +L   +                 +  S   +    +      + L+ + S
Sbjct: 104 ---------AELDKQISGIDQRLQVYQQQRQQYLAESRMQQQLGEKQSAATFVQLKEELS 154

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-------QERIVYKSTLELRENIHEQKN 239
            + A  +  ++ L   +NL+++  +S+ +  +        +        ELR+ + +   
Sbjct: 155 AITAQTAFSRQQLQRYENLYQQRFISRMEYEERKNNTRVLQASQEAKAAELRQRLLDVNA 214

Query: 240 MLRHI-----------NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
               +            +   + +L   N  +E  + + + Q T       +  L  +R+
Sbjct: 215 AKSGLQLTGPRTLDAPQQNQRDMSLTIENMQQEKLQLIARKQATTQSIQE-VAALLHSRQ 273

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           Q  + S   G I    +  S    Q   P+++I+   +  ++ A         ++ G   
Sbjct: 274 QAALNSSTDGVIWDV-TEESGASVQNGTPIVRIL-DCRTRWVEAFFDEADAGSLRPGMAV 331

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           TVR    +  R K     +      ++  + ++Q   
Sbjct: 332 TVRLTTASATRWKGTIRTLRAGSGRVAVGERDVQPPP 368


>gi|237709897|ref|ZP_04540378.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229455990|gb|EEO61711.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 298

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 97/273 (35%), Gaps = 29/273 (10%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q     G+      +V       +Y      L   ++I     D+  + +  +  +   +
Sbjct: 49  QFNIEEGQLLKADEEVGCIDTLQLYLKKMQLLASGKAIASKSTDINKQIAATKEQIGKAE 108

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +    +NL ++NA +Q  ++  +  +     +L   I   +     I E      ++ A
Sbjct: 109 YERKRTENLLKENAATQKQIDDIDSQIAVLKKQLEAQISTLQRGNASITEESSAYEIQVA 168

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                     L+    +  I SPI GT++  +   +   A Q +
Sbjct: 169 Q-------------------------LDDQLRKCHITSPICGTVLA-KYTEAGELATQGK 202

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           PL K V   +  ++RA +T  Q+  +K G    V F    +   ++++  I  I      
Sbjct: 203 PLFK-VADVQHLFLRAYITANQLSQLKLGDKVKV-FSDLGEDDRREYEGTITWISDKSEF 260

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
               +QT++    ++  T +A  ++   ++ G 
Sbjct: 261 TPKTIQTRDERANLVYATKIAVKNDGY-IKIGM 292


>gi|225850406|ref|YP_002730640.1| chemiosmotic efflux system B protein B [Persephonella marina EX-H1]
 gi|225645331|gb|ACO03517.1| chemiosmotic efflux system B protein B [Persephonella marina EX-H1]
          Length = 396

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 65/196 (33%), Gaps = 32/196 (16%)

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           L  I    +    + A  + E +            ++  L   +K  +  T+ SP  G I
Sbjct: 145 LSQIENADNGILKKTAQDMYEAAYKRLLYWDITPQQIENLKKSKKVMKTLTLYSPYDGWI 204

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           +        +  +  +P+++I  H  L  I AKV  + I  +KKG    + F  Y D   
Sbjct: 205 MEKFVN-LGSKVEAGKPVLRIAKHENLWLI-AKVYEQDIPFIKKGQKVMIHFESYPDQIY 262

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF----------- 409
                +++ I P++  ++  +       V + I +  +     +L  G            
Sbjct: 263 ---HGVVDYIYPMMDIRNRTVD------VRIVIPNPEY-----KLIPGMYSNIHIDIPLG 308

Query: 410 -----PAEVLFTAKNT 420
                P   +      
Sbjct: 309 KLMVLPETAVINTGKK 324


>gi|167552684|ref|ZP_02346436.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168244614|ref|ZP_02669546.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194451420|ref|YP_002046777.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197265542|ref|ZP_03165616.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|205353764|ref|YP_002227565.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858083|ref|YP_002244734.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|194409724|gb|ACF69943.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197243797|gb|EDY26417.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|205273545|emb|CAR38531.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205322689|gb|EDZ10528.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205336548|gb|EDZ23312.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|206709886|emb|CAR34239.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 390

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 99  QAFERAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 159 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 211

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 212 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   TV    Y D    K+   +  +D          P  +   N ++  
Sbjct: 259 KETQLANMRIGQPVTVITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 316

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 317 QRLPVRVELDARQLEQHPLRI 337



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFERAKTALASSVRQTH 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 117 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 176

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 177 AIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERT 216


>gi|326799172|ref|YP_004316991.1| secretion protein HlyD [Sphingobacterium sp. 21]
 gi|326549936|gb|ADZ78321.1| secretion protein HlyD family protein [Sphingobacterium sp. 21]
          Length = 350

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 59/409 (14%), Positives = 125/409 (30%), Gaps = 88/409 (21%)

Query: 18  KRMTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           +  T +++I +I L+ W           E +  +      ++ +  I S  +G IK+ + 
Sbjct: 15  RITTAVALILVIALLIWGFRTLVSYYRFEETNDAQ----VDEYINPITSRVNGYIKEVRF 70

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           E    + +G  L+  ++ E     +    S       +   ++ +  L +      K   
Sbjct: 71  EENQNVHKGDTLVIIDNSEYAAQQEEAAAS-------LMNARAQVAVLQSNIQTANKGAA 123

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
                                                            E+     +A L
Sbjct: 124 VD-----------------------------------------------ESHIRAAKARL 136

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              +++    + L+E  + ++  L   +  +  +  +           L   N++  +A+
Sbjct: 137 VKQEQEYNRYQKLYEVESATKQQLEAVQSALEVAKADYLAATDAYAASLSKANDIRVQAD 196

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           +  A             +R    + S L       +   I +P  G +   +S       
Sbjct: 197 VLHAEIK----------RREAVLQRSALNT-----DYTVIRAPYDGKM-GRRSIQPGQLV 240

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           Q  Q L  I+  S   ++ A     QIQH++ G   ++    Y D     F   IE +  
Sbjct: 241 QPGQTLTFIIDRSSGKWVVANFKETQIQHMRVGKEVSISVDAYPDKI---FHGKIESLSG 297

Query: 373 IISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIELR-NGFPAEVLF 415
               +      +  T  + ++  +I   +     +IEL   G  A V  
Sbjct: 298 ATGSRYSLLPPDNSTGNFVKIAQRIPVRIRLEGKDIELLNAGMNATVRV 346


>gi|313107978|ref|ZP_07794147.1| putative secretion protein [Pseudomonas aeruginosa 39016]
 gi|310880649|gb|EFQ39243.1| putative secretion protein [Pseudomonas aeruginosa 39016]
          Length = 354

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/361 (11%), Positives = 95/361 (26%), Gaps = 82/361 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++   VE+   +  G  L   +D +                       +  D L  + 
Sbjct: 56  GFVQDVLVEDNQPVKAGQLLARLDDRDF----------------RTALAAAEADVLGAEA 99

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++       + +Q L    +                                       K
Sbjct: 100 NLANAEANLQRQQALIEQAR--------------------------------------AK 121

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A L   + + +  + L  K A S  +  Q +  +  ++  L E         + +
Sbjct: 122 VRAEQAELVFARHEQSRYQTLASKGAGSLQNAQQAQSRIDTASARLAEGQAAVDATRKQV 181

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           + L                  + Q +       ++            + +P  G +   +
Sbjct: 182 SVLEAR---------------VGQARGDLQRMQARRDQARLDLSYCELRAPFDGQV-GRR 225

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y      L+ +VP  +   +       Q+ HV  G    +R   +     +  +
Sbjct: 226 QLRVGAYVTPGSALLAVVPLQQAYVV-GNFQETQLTHVSPGQAVEIRVDTFP---GEVLR 281

Query: 365 AIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFT 416
             ++ I P      +    +  T  + +V+ +I      +       +LR G   E    
Sbjct: 282 GHVDSIAPATGLSFAPIAPDNATGNFTKVVQRIPVKIVLEPRQTMAGKLRVGMSVEARID 341

Query: 417 A 417
            
Sbjct: 342 T 342


>gi|271499912|ref|YP_003332937.1| secretion protein HlyD family protein [Dickeya dadantii Ech586]
 gi|270343467|gb|ACZ76232.1| secretion protein HlyD family protein [Dickeya dadantii Ech586]
          Length = 390

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 80/269 (29%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +      L   + ++R +Y    + + + +  +  L     D    K L  K A+S  D
Sbjct: 92  ALQQSEAQLASVVRQVRGLYSTVDNYQAQVASKQVALQQAIGDYNRRKGLMAKGAISAED 151

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  V  +   L       +     ++    + + E  N + ++             
Sbjct: 152 LAHYQDAVNSARSALDAAEQALRTNRAMVDNTVLDEHPEIKNAVADLRSKYLD------- 204

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        +  I++P++G +   ++            LM IVP     ++ A   
Sbjct: 205 -----------WARSAIVAPVSGYVAK-RAVQVGMRVSTGATLMTIVPLD-QIWVDANFK 251

Query: 336 PKQIQHVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPIISQQDNNLQTQEYY 387
             Q+ H++ G   T+    Y D                    + P  +   N ++  +  
Sbjct: 252 ESQMLHMRLGQQVTLTADIYGDKTVYHGTIQSLGIGTGSAFSLLPAQNASGNWIKIVQRL 311

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + +         + +      +V   
Sbjct: 312 PVRIALDPEGLKQRPLRIGLSMLTKVDVH 340


>gi|157371978|ref|YP_001479967.1| efflux pump membrane protein [Serratia proteamaculans 568]
 gi|157323742|gb|ABV42839.1| efflux pump membrane protein [Serratia proteamaculans 568]
          Length = 390

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 86/244 (35%), Gaps = 20/244 (8%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS------TLELR 231
              LE   + L   +    + +   K      A+ ++DL++ E  + +           R
Sbjct: 98  EQALERAKTGLANSVRQTHQLIINSKQYQANIALRKSDLSKAENDLKRRVVLGSLDAIGR 157

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E +   ++ +       + A  ++      +     + Q       +++       ++  
Sbjct: 158 EELQHARDAVDSAKAALEVAVQQYNANQAMVLNTPLEQQPAIQQSAAQMRDAWLALQRTK 217

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I+SPI G +   +S           PLM +VP     ++ A     QI +++ G +ATV 
Sbjct: 218 IISPITGYVSR-RSVQVGAQIAAGSPLMAVVPADH-IWVDANFKETQIANMRIGQSATVV 275

Query: 352 FPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDN 401
              Y D     +   +  ID          P  +   N ++  +   V +++     +D+
Sbjct: 276 SDIYGDDV--VYSGKVVGIDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDAKQIADH 333

Query: 402 NIEL 405
            + +
Sbjct: 334 PLRI 337



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 60/160 (37%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-- 109
              N V+I +  +G +     +N   + QG  LLT +  +    ++  K  + N      
Sbjct: 57  VSGNQVQIMAQVNGSVNSVNFDNTDYVKQGDVLLTLDPTDAEQALERAKTGLANSVRQTH 116

Query: 110 ---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              I++++   +    K D+ +   + +   +L  L        +     + S   +L++
Sbjct: 117 QLIINSKQYQANIALRKSDLSKAENDLKRRVVLGSLDAIGREELQHARDAVDSAKAALEV 176

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
            + +  +     L+  LE + ++ ++        L + + 
Sbjct: 177 AVQQYNANQAMVLNTPLEQQPAIQQSAAQMRDAWLALQRT 216


>gi|94497416|ref|ZP_01303986.1| Secretion protein HlyD [Sphingomonas sp. SKA58]
 gi|94423047|gb|EAT08078.1| Secretion protein HlyD [Sphingomonas sp. SKA58]
          Length = 527

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 57/183 (31%), Gaps = 15/183 (8%)

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              E +   A+Y   I  +L   Q       ++L+  +       I+SP+ G ++  +  
Sbjct: 178 AKTELDAARADYQSAI-ANLRSAQAQVTASQAQLSSAQTNLSIAQIVSPVTGVVLS-RDI 235

Query: 307 SSSNYAQQ---SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                      +  L  I        +   V    +  VK+G +AT     +        
Sbjct: 236 EPGQTVAASLNAPVLFTIAEDLTQMEVEVAVDEADVGQVKEGQSATFAVDAFPGRSFP-- 293

Query: 364 KAIIEKI-------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            A + ++           S   ++  +     V+     L+ ++ +  LR G  A     
Sbjct: 294 -AKVTRVNVGSNASSSASSSSTSSSSSSTTGTVVAYTAVLSVNNQDEILRPGMTATADIV 352

Query: 417 AKN 419
            + 
Sbjct: 353 TQE 355



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 57/157 (36%), Gaps = 14/157 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + ++VS++G +   + V ++ S  SG I +  V+   ++ +G  L   +     D ++  
Sbjct: 79  LTVTVSATGNLKPINQV-DVGSEQSGKITQVYVDVNDRVTRGQKLAELDTRRLVDTVNQN 137

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  + +          A          L KA   R+E +    G      ++     + +
Sbjct: 138 RAQVAS--------SQASVAQAQAQVALAKATLDRQENVFKLSGGRVPAKTE-----LDA 184

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                +  +  +RS        + + S  +  LS  Q
Sbjct: 185 ARADYQSAIANLRSAQAQVTASQAQLSSAQTNLSIAQ 221


>gi|116050840|ref|YP_790337.1| putative secretion protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296388677|ref|ZP_06878152.1| putative secretion protein [Pseudomonas aeruginosa PAb1]
 gi|115586061|gb|ABJ12076.1| putative secretion protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 354

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/361 (11%), Positives = 95/361 (26%), Gaps = 82/361 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++   VE+   +  G  L   +D +                       +  D L  + 
Sbjct: 56  GFVQDVLVEDNQPVKAGQLLARLDDRDF----------------RTALAAAEADVLGAEA 99

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++       + +Q L    +                                       K
Sbjct: 100 NLANAEANLQRQQALIEQAR--------------------------------------AK 121

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A L   + + +  + L  K A S  +  Q +  +  ++  L E         + +
Sbjct: 122 VRAEQAELVFARHEQSRYQTLASKGAGSLQNAQQAQSRIDTASARLAEGQAAVDATRKQV 181

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           + L                  + Q +       ++            + +P  G +   +
Sbjct: 182 SVLEAR---------------VGQARGDLQRMQARRDQARLDLSYCELRAPFDGLV-GRR 225

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y      L+ +VP  +   +       Q+ HV  G    +R   +     +  +
Sbjct: 226 QLRVGAYVTPGSALLAVVPLQQAYVV-GNFQETQLTHVSPGQAVEIRVDTFP---GEVLR 281

Query: 365 AIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFT 416
             ++ I P      +    +  T  + +V+ +I      +       +LR G   E    
Sbjct: 282 GHVDSIAPATGLSFAPIAPDNATGNFTKVVQRIPVKIVLEPRQAMAGKLRVGMSVEARID 341

Query: 417 A 417
            
Sbjct: 342 T 342


>gi|329917239|ref|ZP_08276461.1| putative RND divalent metal cation efflux membrane fusion protein
           (czcBlike) [Oxalobacteraceae bacterium IMCC9480]
 gi|327544587|gb|EGF30069.1| putative RND divalent metal cation efflux membrane fusion protein
           (czcBlike) [Oxalobacteraceae bacterium IMCC9480]
          Length = 338

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 63/205 (30%), Gaps = 18/205 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E +  +  L L     E++  L       ++  LE    ++E    +   Q+  A   
Sbjct: 78  RSELLTAQKRLGLARLTAEREKRLWQEKISAEQDYLEAQQAMQEAEIAVRNAQQKLAAIG 137

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +  +   ++     I +P  GT++     S     ++   +  I  +    +    V  K
Sbjct: 138 AT-SGSARSLASFEIRAPFDGTVMEKHV-SLGEAVKEDASIFTIS-NLSEVWAEVDVAAK 194

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I  V+ G    V+               I  +  ++ +Q    +             + 
Sbjct: 195 DIDQVRVGEKVVVKATASNANTT----GTISYVGSLLGEQTRTAKAH-----------IV 239

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTL 422
            ++     R G    V   A  T+ 
Sbjct: 240 VANPKGAWRPGLSVTVEIVAGQTSA 264



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 40/116 (34%), Gaps = 5/116 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +    I  ++   G+I   ++    +    +G+++      G  + +G  L        +
Sbjct: 16  AGSGEINTTLIVPGQISYNEDKTAHVVPRLAGVVENVSANLGQLVKRGQVLAVIASTGLS 75

Query: 94  DLIDLKKVSIKNL-RCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKY 145
           +       + K L    +  E+      + ++ + D LE     +E ++     + 
Sbjct: 76  EQRSELLTAQKRLGLARLTAEREKRLWQEKISAEQDYLEAQQAMQEAEIAVRNAQQ 131


>gi|193214223|ref|YP_001995422.1| RND family efflux transporter MFP subunit [Chloroherpeton
           thalassium ATCC 35110]
 gi|193087700|gb|ACF12975.1| efflux transporter, RND family, MFP subunit [Chloroherpeton
           thalassium ATCC 35110]
          Length = 424

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 79/235 (33%), Gaps = 20/235 (8%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
             S +++ + +   +++   + L    AV   +L +   +  ++ LE  E   EQ  +  
Sbjct: 65  QTSGIIKKIYTDFNQEVKKDQLL----AVLDTELLKASLLSAEANLEKSEAELEQAELDY 120

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
             N+   E              DL+  + +     S +   ++      I SPI GT++ 
Sbjct: 121 ARNKKLYEGGFLAEADFLPYKIDLKTAKASVKTAQSTVAQAQQNMHYAYIRSPINGTVIE 180

Query: 303 NQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
                       S     L  I        I A+V    I  +K+G       P Y ++ 
Sbjct: 181 KDV-EEGQTVAASYSTPTLFVIAEDLSKIQIEAEVDESDIGSIKEGQPVRFEVPAYTNM- 238

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
              F   + +I  +  +  NN+     Y VI+        + +  L  G    V 
Sbjct: 239 --SFTGTVFQI-RLQPEVTNNVVN---YTVIIYAD-----NKDDILLPGMTCTVD 282



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 5/134 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +VS +G I     V E+ +  SGIIKK   +   ++ +   L   +       +   
Sbjct: 44  VENTVSCTGTISPLSEV-EVGTQTSGIIKKIYTDFNQEVKKDQLLAVLDTELLKASLLSA 102

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + +++     +  E++ LD+  NK   L +     E   L +     +  + V     + 
Sbjct: 103 EANLEKSEAEL--EQAELDYARNKK--LYEGGFLAEADFLPYKIDLKTAKASVKTAQSTV 158

Query: 160 VYRSLKMKLTRMRS 173
                 M    +RS
Sbjct: 159 AQAQQNMHYAYIRS 172


>gi|161615711|ref|YP_001589677.1| hypothetical protein SPAB_03496 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161365075|gb|ABX68843.1| hypothetical protein SPAB_03496 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 390

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 99  QAFEKAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 159 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 211

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 212 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   T+    Y D    K+   +  +D          P  +   N ++  
Sbjct: 259 KETQLANMRIGQPVTIITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 316

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 317 QRLPVRVELDARQLEQHPLRI 337



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFEKAKTALASSVRQTH 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 117 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 176

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 177 AIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERT 216


>gi|150376832|ref|YP_001313428.1| hypothetical protein Smed_4698 [Sinorhizobium medicae WSM419]
 gi|150031379|gb|ABR63495.1| secretion protein HlyD family protein [Sinorhizobium medicae
           WSM419]
          Length = 334

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 99/310 (31%), Gaps = 36/310 (11%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A E+R+  L   +     +     +  I+ +       +   +   + RLD E     L 
Sbjct: 30  AGETRQAVLYGNVDIRQVSLGFRVSGRIAELRVDEGDSV--RKGDVIARLDDEPFRQTLD 87

Query: 190 ALLSSHQKDLTMMKNL---FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           A  +  +     +  L        ++Q     +ER+      EL     +Q      I++
Sbjct: 88  ASEAEAEASRATLTKLKAGARAGEIAQARATHEERLAELENAELAYERAKQLRPNGTISQ 147

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFAD----------------EMSKLTILEKTREQK 290
              + +          +R   +      +                  +K      + +  
Sbjct: 148 AELDQSSAGRAAAAARARSAREGLALLEEGSRVEDITSAEAQVDAAAAKAASARTSLKDT 207

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            +++P  G ++  +   +      +  ++ ++  ++  ++RA V    +  +  G   T+
Sbjct: 208 ELVAPNDGVVLS-RVRETGAIVSPAD-VVYVLSLTEPVWVRAYVAEPDLGRLYPGMKVTI 265

Query: 351 RFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
                     + ++  +  I P+      S +   L+T   Y + + IT+        +L
Sbjct: 266 ---ASDTAPGRAYEGTVGFISPVAEFTPKSVETPELRTDLVYRLRIVITNPGK-----DL 317

Query: 406 RNGFPAEVLF 415
           R G P  V  
Sbjct: 318 RQGMPVTVQL 327



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 37/123 (30%), Gaps = 3/123 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL---DFL 120
           SG I + +V+ G  + +G  +   +D      +D  +   +  R  +   K+     +  
Sbjct: 54  SGRIAELRVDEGDSVRKGDVIARLDDEPFRQTLDASEAEAEASRATLTKLKAGARAGEIA 113

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +    E+  E    +L     K       +    +            R RS       
Sbjct: 114 QARATHEERLAELENAELAYERAKQLRPNGTISQAELDQSSAGRAAAAARARSAREGLAL 173

Query: 181 LEN 183
           LE 
Sbjct: 174 LEE 176


>gi|330819209|ref|YP_004348071.1| Secretion protein HlyD family protein [Burkholderia gladioli BSR3]
 gi|327371204|gb|AEA62559.1| Secretion protein HlyD family protein [Burkholderia gladioli BSR3]
          Length = 452

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/318 (11%), Positives = 88/318 (27%), Gaps = 69/318 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + N V I    SG + +  V++ + + +G  L+  +  +    +D     +   R  + +
Sbjct: 148 DGNAVTIAPHVSGYVTRLNVDDNTYVHRGDLLVQIDPRDYRAQLDSADAQLGLARAQLSS 207

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +  LD    +Y                                I S   + K  L   +
Sbjct: 208 AQVQLDIARVQYP----------------------AQYAQARAQIESAEATYKQALAAQQ 245

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
             +   +   +K  +  A   S   D  +                   R   ++   + +
Sbjct: 246 RQHAVDMRATSKQQVDAADAQSASADANV----------------AMARAQARTAALVPQ 289

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + + ++ +    +   +A  +                             E       I
Sbjct: 290 QLRQVESTIEERRQQVLQAQAQREQ-------------------------AELNLSYCEI 324

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +         ++ Q    +  +V  +   +I A     Q++ ++ G    V  
Sbjct: 325 RAPSDGWVTRRNV-QLGSFLQTGSSIFSLV--TPRIWITANFKESQLERMRIGDKVDVSV 381

Query: 353 PHYADIREKKFKAIIEKI 370
             Y D+        ++ I
Sbjct: 382 DAYPDL---DLHGHVDSI 396


>gi|315608867|ref|ZP_07883841.1| Acr family efflux transporter [Prevotella buccae ATCC 33574]
 gi|315249474|gb|EFU29489.1| Acr family efflux transporter [Prevotella buccae ATCC 33574]
          Length = 397

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 76/225 (33%), Gaps = 21/225 (9%)

Query: 204 NLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           ++ +K  V     + +L  Q      +    + N+  Q    +    LY +  +   +Y 
Sbjct: 82  SVVKKGQVIAELDKINLLSQLHSAKATLSSNQSNLDYQTANYKRYQTLYKKGLVSADDYE 141

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---Q 316
              +    Q +   A    ++   +      TI SPI G ++  +S         S    
Sbjct: 142 S-AALSYRQAREQVASAQEEVQRAQTNLGYATITSPIDGVVLS-KSVEEGQTVAASFSTP 199

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  I        + A V    I  VK G   T     Y D     F+  ++++    + 
Sbjct: 200 ELFTIAQDLTNMQVVADVDEADIGDVKAGERVTFTVDAYPDDT---FQGTVKQVRQEATT 256

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +N +     YEV++        + +++L+ G  A V       +
Sbjct: 257 TNNVVT----YEVVISAP-----NADLKLKPGLTANVTILTSEKS 292



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 72/186 (38%), Gaps = 4/186 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ S++++G I    +V  + +  SGI+ K  V+  S + +G  +   + I     +   
Sbjct: 47  LQSSITATGTIEPVTSV-TVGTQVSGIVSKLYVDYNSVVKKGQVIAELDKINLLSQLHSA 105

Query: 100 KVSIKNLRCHIDTEKS---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           K ++ + + ++D + +       L  K  V    +ES          +  S   +V    
Sbjct: 106 KATLSSNQSNLDYQTANYKRYQTLYKKGLVSADDYESAALSYRQAREQVASAQEEVQRAQ 165

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +  Y ++   +  +             +S     L +  +DLT M+ + + +     D+
Sbjct: 166 TNLGYATITSPIDGVVLSKSVEEGQTVAASFSTPELFTIAQDLTNMQVVADVDEADIGDV 225

Query: 217 NQQERI 222
              ER+
Sbjct: 226 KAGERV 231


>gi|320180191|gb|EFW55127.1| Multidrug resistance protein A [Shigella boydii ATCC 9905]
 gi|332088585|gb|EGI93698.1| multidrug resistance protein A [Shigella dysenteriae 155-74]
          Length = 326

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 34  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 93

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 94  EELQHARDAVTSAQEQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 147

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 148 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 193

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 194 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 251

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 252 VQRLPVRIELDQKQLEQYPLRI 273



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 52/151 (34%), Gaps = 7/151 (4%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKS 115
           S  SG + K   +N   + +G  L+T +        +  K ++ +      +  I++++ 
Sbjct: 2   SQVSGSVTKVWADNTDFVKEGDVLVTLDPTNARQAFEKAKTALASSVRQTHQLMINSKQL 61

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
             +    K  + +   +      L           +     ++S    L + + +  +  
Sbjct: 62  QANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQEQLDVAIQQYNANQ 121

Query: 176 LNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
              L   LE++ ++ +A        L + + 
Sbjct: 122 AMILGTKLEDQPAVQQAATEVRNAWLALERT 152


>gi|301026681|ref|ZP_07190092.1| efflux pump membrane protein [Escherichia coli MS 196-1]
 gi|299879603|gb|EFI87814.1| efflux pump membrane protein [Escherichia coli MS 196-1]
          Length = 390

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANQIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIISPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 67/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 32  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 85  EGDVLVTLDPTDARQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 144

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L    +      +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 145 RRVPLGNANQIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 204

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 205 EVRNAWLALERT 216


>gi|213610086|ref|ZP_03369912.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 355

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 99  QAFERAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 159 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 211

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 212 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   T+    Y D    K+   +  +D          P  +   N ++  
Sbjct: 259 KETQLANMRIGQPVTIITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 316

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 317 QRLPVRVELDARQLEQHPLRI 337



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFERAKTALASSVRQTH 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 117 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 176

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 177 AIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERT 216


>gi|110632491|ref|YP_672699.1| hypothetical protein Meso_0129 [Mesorhizobium sp. BNC1]
 gi|110283475|gb|ABG61534.1| secretion protein HlyD [Chelativorans sp. BNC1]
          Length = 344

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/355 (10%), Positives = 98/355 (27%), Gaps = 88/355 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G + +  V+ G ++  G                        L   +D            
Sbjct: 59  GGRVSEMLVDEGDRVETGQ-----------------------LLARLD------------ 83

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                               + ++   +     ++S   +L       R   + +     
Sbjct: 84  -------------------DRTYADAVRAAEAQVASQQANLAKLEAGPRQAEIAQA--RA 122

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +     L++ ++ L   + L    A+SQ  L+Q +     ++  +       + +   
Sbjct: 123 TLAEQTYNLTNAEQALERARQLRPGGAISQAALDQAQSARDMASARVDAAQEALRLLEEG 182

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             +                  D+   + +     + L   + +     + +  AG I+  
Sbjct: 183 TRK-----------------EDIAAAKASLQAAEANLASAKTSLGDTELRASAAGVILS- 224

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +                ++   +  ++R  V    +  +  G    V         E+ +
Sbjct: 225 RVREPGAILSPGDA-AYVLSLDRPVWVRTYVEEPDLGRIHPGLAVEV---VTDSAPERPY 280

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +  I  I P+      S +   L+T   Y + + + +      ++ LR G P  V
Sbjct: 281 RGQIGFISPVAEFTPKSVETPELRTDLVYRLRVIVEEP-----DLGLRQGMPVTV 330


>gi|331669114|ref|ZP_08369962.1| multidrug resistance protein K [Escherichia coli TA271]
 gi|331678361|ref|ZP_08379036.1| multidrug resistance protein K [Escherichia coli H591]
 gi|331064308|gb|EGI36219.1| multidrug resistance protein K [Escherichia coli TA271]
 gi|331074821|gb|EGI46141.1| multidrug resistance protein K [Escherichia coli H591]
          Length = 387

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|257439295|ref|ZP_05615050.1| efflux transporter, RND family, MFP subunit [Faecalibacterium
           prausnitzii A2-165]
 gi|257198170|gb|EEU96454.1| efflux transporter, RND family, MFP subunit [Faecalibacterium
           prausnitzii A2-165]
          Length = 577

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 54/399 (13%), Positives = 125/399 (31%), Gaps = 32/399 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I    S SG I    N   + +  SG +       G  I +GT L T +     +  +  
Sbjct: 82  ITNVFSGSGTI-AAANTYTVNALVSGTVLTADFAVGDTIEEGTVLYTIDSSNAANSAEKA 140

Query: 100 KVSIKNLRCHID--------------TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           ++S+   + + +              T  S    + +     ++    R+   L    ++
Sbjct: 141 QLSLDQAQRNYEDAVDAQYIRSTIGGTLASYKVAVGDVVTAGQEVATVRDASTLLLTLEF 200

Query: 146 HSTCSKVFNYGISSV--YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +  +  F  G ++          ++           L + + L+R +  +     ++  
Sbjct: 201 PAADAANFTVGQAAQVTLDGTFEAVSGTVRSVSGADALSSGNLLVRTVTIAVNNTGSLTT 260

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL-KEI 262
                 +V+        +  Y++   +  +       L         A+        KE+
Sbjct: 261 AQAATASVNGVSALASAKFSYQNEQTITASTGGTVTALCVKEGSSVSADTALVRISGKEL 320

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ-QSQPLMKI 321
           ++ ++            +   E      TI SPI+GT++  +  +    +       +  
Sbjct: 321 TKQVQNASDNLRSAQMSMEDTEDQLNNYTITSPISGTVISKEVKAGDTVSNTAGSTSLCT 380

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           +       +   V   +I  +K+G + T+     +D     F  ++  +     +    +
Sbjct: 381 IYDLSYLQMTVNVDELEILSIKEGQSVTITADAISDRT---FTGVVTSVS----KAGTTV 433

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                Y V ++I D        +L  G  A    T  +T
Sbjct: 434 GGTTTYPVTIRIDDTG------DLLPGMNATAEITTAST 466



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 31/85 (36%), Gaps = 2/85 (2%)

Query: 35  SILLPIEIS-VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +    +      +S +     N   I +   G +    V+ GS +   T L+     E T
Sbjct: 263 AATASVNGVSALASAKFSY-QNEQTITASTGGTVTALCVKEGSSVSADTALVRISGKELT 321

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALD 118
             +     ++++ +  ++  +  L+
Sbjct: 322 KQVQNASDNLRSAQMSMEDTEDQLN 346


>gi|257093795|ref|YP_003167436.1| secretion protein HlyD family protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046319|gb|ACV35507.1| secretion protein HlyD family protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 385

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/375 (9%), Positives = 107/375 (28%), Gaps = 47/375 (12%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+ +G I  E   V+I +  +G +++  V+ G  +  G  +   +           +  +
Sbjct: 39  VAGNGRI--ESTAVDIATKSAGRVREVLVKEGDFVDPGAIVARMDTQALEAEFQQLQAKV 96

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           K                                       +  S+ +            S
Sbjct: 97  K-------------------------------------QAESASSTATAVAAQRQEAMAS 119

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
               +T+ R      L    +     + ++  +++L   + L  +  +++  L      +
Sbjct: 120 AAALVTQRRQAKATALATVTQG---ESEVAFAEQELKRSEELVARGFITEQRLEADRNRL 176

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +   L             I     +  LE  + ++     + +++ +    ++    +
Sbjct: 177 QVARAALTAARSRVAEAQAAIETAQSQT-LETQSAIEASRSQVAESESSIDAAIAATAKI 235

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +      T+ +P  G + Y ++            ++ ++  S   Y+   +       V 
Sbjct: 236 KADIADATLRAPRGGRVQY-RTAEPGEVLPAGGKVLTVLDLSD-VYMSFFLPETVAGKVA 293

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDN 401
            G  A +      +       + ++       +  +  + + +  +    +I        
Sbjct: 294 IGAEARLVLDAAPEYVIPARISFVDSAAQFTPKAVETASERQKLAFRTRAQIDPEVLRKY 353

Query: 402 NIELRNGFPAEVLFT 416
             +++ G P      
Sbjct: 354 RTQVKTGLPGVAYVR 368


>gi|261341405|ref|ZP_05969263.1| transporter, membrane fusion protein [Enterobacter cancerogenus
           ATCC 35316]
 gi|288316722|gb|EFC55660.1| transporter, membrane fusion protein [Enterobacter cancerogenus
           ATCC 35316]
          Length = 364

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/318 (11%), Positives = 97/318 (30%), Gaps = 69/318 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + +VV I    +G + + +V +  ++ +G  L+  +  +TT                   
Sbjct: 60  DGDVVTIAPKTAGYVTELRVRDNQRVKKGDVLVVIDPRDTTAQ----------------- 102

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                              +  + QL   + + H   +++    +               
Sbjct: 103 ------------------RDQAQAQLGLAVAQLHQAQAQLALSKVQ-------------- 130

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
             Y  + D E K+ +L+A            +   ++    +      ++ +  +  +LR 
Sbjct: 131 --YPAQRD-EAKAQVLKAQADMANAQAEYRR---QRGVDPRA---TTQQSIDSANAQLRS 181

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                 +    +     E   +    +++   ++E  +R      ++L           +
Sbjct: 182 AQAGLASAQAQL-----EVAEQVQLQIRQQETNVEARERQVDQAKAQLETANLNLSYTEV 236

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +            Q    L  +V  S   ++ A     Q++ +K G   +V  
Sbjct: 237 RAPFDGFVTKRNV-QPGTLVQAGTALFSLV--SPNVWVVANFKESQLERMKPGDKVSVSV 293

Query: 353 PHYADIREKKFKAIIEKI 370
             + D+     +  I+ I
Sbjct: 294 DAWPDM---ALEGHIDSI 308


>gi|332087407|gb|EGI92535.1| multidrug resistance protein A [Shigella boydii 5216-82]
          Length = 347

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 55  RQAFEKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 114

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 115 EELQHARDAVTSAQEQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 168

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 169 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 214

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 215 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 272

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 273 VQRLPVRIELDQKQLEQYPLRI 294



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 56/160 (35%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N ++I S  SG + K   +N   + +G  L+T +        +  K ++ +      
Sbjct: 14  VAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTNARQAFEKAKTALASSVRQTH 73

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I++++   +    K  + +   +      L           +     ++S    L +
Sbjct: 74  QLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREELQHARDAVTSAQEQLDV 133

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
            + +  +     L   LE++ ++ +A        L + + 
Sbjct: 134 AIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERT 173


>gi|317477268|ref|ZP_07936505.1| HlyD family secretion protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316906580|gb|EFV28297.1| HlyD family secretion protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 296

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 85/247 (34%), Gaps = 33/247 (13%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         ++S+   R D+  + +  +  +   Q++   + NL    A +Q  L+ 
Sbjct: 68  QLYLKKLQLEANVKSVEGQRPDILKQVAATKEQIVQAQRERDRVHNLLRVGAANQKQLDD 127

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E ++     +L       +N  + +        ++ A                      
Sbjct: 128 AESLLEVLRKQLAAQNSTLQNSDQSLTWQSSSVGVQVAQ--------------------- 166

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               ++   ++  I SP+ GT++  +   +   A    PL K V   +  Y+RA +T +Q
Sbjct: 167 ----IQDQLKKCHITSPLTGTVLA-KYAEAGELAAPGTPLFK-VADMEQVYLRAYITSEQ 220

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV +  Y     K++  ++  I              + +    Y V + +
Sbjct: 221 LSEVKLGQKVTV-YSDYGKEVRKEYPGVVTWISDSSEFTPKTILTKDERANLVYAVKVAV 279

Query: 394 TDLAFSD 400
            +     
Sbjct: 280 KNDGMLK 286


>gi|291537429|emb|CBL10541.1| RND family efflux transporter, MFP subunit [Roseburia intestinalis
           M50/1]
          Length = 482

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 104/359 (28%), Gaps = 59/359 (16%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  V  G Q+  G  LL   D                                   + 
Sbjct: 103 VEEVYVSVGQQVKAGDALLKLTD-----------------------------------ES 127

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR---SLKMKLTRMRSIYLNRLDLEN 183
           +EK  +  +E + +    Y+S         +S+ Y    S+               +L++
Sbjct: 128 IEKYRKKLQEAVTEASADYNSAALSSAKEKVSASYSYNLSVAEGSVAQEEYEATISELQD 187

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +  +   Q  LT  + + +        L  ++    K   +L+            
Sbjct: 188 AVDEAQEAVDESQALLTYYQEMIDSGMDLSESLADEQGNYDKLYNKLKAAKSAYTTKSVE 247

Query: 244 INELYDEANLEFANYLKEISRDLE-------QNQRTFADEMSKLTILEKTREQKTILSPI 296
             + Y EA L + N   + S D+          Q T  D    L+  E      TI S  
Sbjct: 248 AEKKYKEAMLSYENADSQYSADVAGVDVSVDTAQDTLTDAKEALSEFEIFVGDGTIYSDY 307

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GTI+    + + +       ++     +    +   V+ + I  +  G    +    Y 
Sbjct: 308 DGTIMSVG-YEAGDDLSAGTSIVTFA-DTDAVTMTVSVSEEDISEIAIGDEVMIELNAYE 365

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           D     F   +E ID  +S   + +     Y V +KI           +       V  
Sbjct: 366 DQT---FFGEVESIDTSVSSGSSTVS----YNVTVKINGDVDG-----IYTDMTGNVTI 412


>gi|49087016|gb|AAT51405.1| PA2836 [synthetic construct]
          Length = 355

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/368 (11%), Positives = 96/368 (26%), Gaps = 84/368 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++   VE+   +  G  L   +D +                       +  D L  + 
Sbjct: 56  GFVQDVLVEDNQPVKAGQLLARLDDRDF----------------RTALAAAEADVLGAEA 99

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++       + +Q L    +                                       K
Sbjct: 100 NLANAEANLQRQQALIEQAR--------------------------------------AK 121

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A L   + + +  + L  K A S  +  Q +  +  ++  L E         + +
Sbjct: 122 VRAEQAELVFARHEQSRYQTLASKGAGSLQNAQQAQSRIGTASARLAEGQAAVDATRKQV 181

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           + L                  + Q +       ++            + +P  G +   +
Sbjct: 182 SVLEAR---------------VGQARGDLQRMQARRDQARLDLSYCELRAPFDGQV-GRR 225

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y      L+ +VP  +   +       Q+ HV  G    +R   +     +  +
Sbjct: 226 QLRVGAYVTPGSALLAVVPLQQAYVV-GNFQETQLTHVSPGQAVEIRVDTFP---GEVLR 281

Query: 365 AIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLF- 415
             ++ I P      +    +  T  + +V+ +I      +       +LR G   E    
Sbjct: 282 GHVDSIAPATGLSFAPIAPDNATGNFTKVVQRIPVKIVLEPRQAMAGKLRVGMSVEARID 341

Query: 416 -TAKNTTL 422
                 + 
Sbjct: 342 TATGTRSA 349


>gi|332292239|ref|YP_004430848.1| efflux transporter, RND family, MFP subunit [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332170325|gb|AEE19580.1| efflux transporter, RND family, MFP subunit [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 428

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 76/263 (28%), Gaps = 53/263 (20%)

Query: 171 MRSIYLNRLDLENKSSLL---RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             ++  +R  L+N  + L    A L+  +      K LF+K  +S+ D  + +  +  + 
Sbjct: 100 QAAVSQSRAALQNSRAGLSQAEASLNQAKLTFNRNKPLFDKGVISKADFERAQSDLDIAQ 159

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              +   +  +++   + +                                         
Sbjct: 160 ANRQSAFYNVQSVAAQVKQ------------------------------------ATDNL 183

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPL-MKIVPHS--KLTYIRAKVTPKQIQHVKK 344
            + +I +P  GTI              +Q    +IV  +      +   V    I  +  
Sbjct: 184 GRTSIFAPRDGTISMLNVELGERVVGTAQMAGTEIVRVANLNNMEVEVDVNENDIVKIAI 243

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD-------LA 397
           G +  V    Y   +   F  ++ +I    +Q          ++V ++I +         
Sbjct: 244 GDSTIVEVDAYLKTK---FAGVVTEI-ANSAQATLTADQVTNFKVKVRILEESYKHLLEG 299

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
             D     R G  A V    K  
Sbjct: 300 KKDTYSPFRPGMTATVDIITKKR 322



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 66/194 (34%), Gaps = 2/194 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  +V+++G+I  E  V  + S  SG I    ++ G  + +G  L+          + 
Sbjct: 46  ATIIETVAATGKIQPEIEVK-LSSEVSGEIIDLPIKEGQDVKKGDLLVKINPDLVQAAVS 104

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + +++N R  +   +++L+     ++  +  F+       DF            N   
Sbjct: 105 QSRAALQNSRAGLSQAEASLNQAKLTFNRNKPLFDKGVISKADFERAQSDLDIAQANRQS 164

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +           +  +  L R  +   +   +  L     + +     +     V   +L
Sbjct: 165 AFYNVQSVAAQVKQATDNLGRTSIFAPRDGTISMLNVELGERVVGTAQMAGTEIVRVANL 224

Query: 217 NQQERIVYKSTLEL 230
           N  E  V  +  ++
Sbjct: 225 NNMEVEVDVNENDI 238


>gi|320539495|ref|ZP_08039164.1| putative multidrug efflux system [Serratia symbiotica str. Tucson]
 gi|320030620|gb|EFW12630.1| putative multidrug efflux system [Serratia symbiotica str. Tucson]
          Length = 390

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 86/258 (33%), Gaps = 22/258 (8%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS------TLELR 231
               E   + L   +    + +   K      A+ ++DL++ E  + +           R
Sbjct: 98  EQAFERAKTGLANSVRQTHQLIINSKQFQANIALRKSDLSKAENDLKRRVVLGNVDAIGR 157

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E +   ++ +       + A  ++      +     + Q       +++       ++  
Sbjct: 158 EELQHARDAVDSAKAALEVATEQYNANQAMVLDTPLEQQPAILQSAAQMRDAWLAMQRTK 217

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           +LSPI G +   +S           PLM +VP     ++ A     QI +++ G   TV 
Sbjct: 218 VLSPITGYVSR-RSVQIGAQIAAGAPLMAVVPADH-IWVDANFKETQIANMRIGQPVTVI 275

Query: 352 FPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDN 401
              Y D     +   +  ID          P  +   N ++  +   V +++     +D+
Sbjct: 276 SDVYGDDV--IYNGKVAGIDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDAKQIADH 333

Query: 402 NIELRNGFPAEVLFTAKN 419
            + +  G    V     +
Sbjct: 334 PLRI--GLSTRVKVDTGD 349



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 63/175 (36%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-- 109
              N V+I +  SG +    V+N   + QG  LL  +  +     +  K  + N      
Sbjct: 57  VSGNQVQIMAQVSGSVNSVNVDNTDYVKQGDVLLMLDPTDAEQAFERAKTGLANSVRQTH 116

Query: 110 ---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              I++++   +    K D+ +   + +   +L  +        +     + S   +L++
Sbjct: 117 QLIINSKQFQANIALRKSDLSKAENDLKRRVVLGNVDAIGREELQHARDAVDSAKAALEV 176

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
              +  +     LD  LE + ++L++        L M +          VS+  +
Sbjct: 177 ATEQYNANQAMVLDTPLEQQPAILQSAAQMRDAWLAMQRTKVLSPITGYVSRRSV 231


>gi|264676277|ref|YP_003276183.1| secretion protein HlyD [Comamonas testosteroni CNB-2]
 gi|262206789|gb|ACY30887.1| secretion protein HlyD [Comamonas testosteroni CNB-2]
          Length = 311

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 57/157 (36%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P      + G+I  E  ++++ S  SG++++  V+ G  + +G P+L   D      + +
Sbjct: 46  PQSQVAVARGKIDVEGGLLDLSSAASGVVQQLLVKEGQSVQKGQPVLRLVDDAARADLAV 105

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  ++  +  + T +  L  L       + A +     L        +         I+
Sbjct: 106 AESELQLAQTKLKTRQDRLPALKATLTRWQSAAKQGAADLQSVDEAVQALRDAQSEVDIA 165

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +   ++  +        L R +L    + +   L + 
Sbjct: 166 AAEVTVAKRKAEQLRALLQRHELRAPEAAVVVRLQAQ 202



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 81/240 (33%), Gaps = 14/240 (5%)

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMK 203
               S +         +S          +    LDL + +S +   L     Q       
Sbjct: 31  QDAASVITPAAAQIKPQSQVAVARGKIDVEGGLLDLSSAASGVVQQLLVKEGQSVQKGQP 90

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--E 261
            L   +  ++ DL   E  +  +  +L+        +   +      A    A+     E
Sbjct: 91  VLRLVDDAARADLAVAESELQLAQTKLKTRQDRLPALKATLTRWQSAAKQGAADLQSVDE 150

Query: 262 ISRDLEQNQRTFADEMSKLTILEKT-------REQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             + L   Q       +++T+ ++         ++  + +P A  +V  Q+    +  Q 
Sbjct: 151 AVQALRDAQSEVDIAAAEVTVAKRKAEQLRALLQRHELRAPEAAVVVRLQAQG-GSMLQS 209

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK-AIIEKIDPI 373
             P+  ++P  +   +RA+V    +  +++G  A V          ++F  A + +I P+
Sbjct: 210 GSPVAVLLPK-RPFIVRAEVNESFVTAIREGMKALVTVDADGSAARQEFPAATVLRISPV 268


>gi|212705032|ref|ZP_03313160.1| hypothetical protein DESPIG_03100 [Desulfovibrio piger ATCC 29098]
 gi|212671514|gb|EEB31997.1| hypothetical protein DESPIG_03100 [Desulfovibrio piger ATCC 29098]
          Length = 330

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 95/292 (32%), Gaps = 24/292 (8%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           + R  Q+L   G       ++       + +       ++       L LE         
Sbjct: 54  DGRIAQVLVDEGDSVRAGQELARLDDDLLRQQRDQTAAQLAGQKAQLLRLERGYRT--EE 111

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   +  +   + + +  A++ N ++        S  EL       ++    +    ++ 
Sbjct: 112 VEQARAAVARARAVADNAAINLNRISAMRARNAISQKELDNARSSDRSARAELRSAQEQL 171

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           ++  + Y +E   ++   +       + L + E       + +P  G ++  ++  +   
Sbjct: 172 DMLLSGYREE---EVLAQRAAVDAAAAALELAEIRLRDALLTAPQDGIVLT-RAREAGAI 227

Query: 312 AQQSQPL--MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            Q  Q +  + +V      ++R  V   Q+  +K G    VR     D   K+F   +  
Sbjct: 228 VQAGQTVYTLSLV---DPVWLRVYVDEPQLGRIKPGMAVRVRVDAVPD---KEFSGRVGF 281

Query: 370 IDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           I P       S +   ++T   Y + +++ D            G P  V   
Sbjct: 282 ISPAAEFTPKSVETMEVRTSLVYRLRVQVDDPDNVMRQ-----GMPVTVTLV 328



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 52/183 (28%), Gaps = 13/183 (7%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS----GIIKKFQVE 73
           K +  + ++G+   + W  L        + G ++   NV   +   S    G I +  V+
Sbjct: 9   KILAAVLLVGVAVALGWYFLWD-----GTQGNLVLYGNVEIRQVDVSFRVDGRIAQVLVD 63

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L   +D       D     +   +  +   +          +V +     
Sbjct: 64  EGDSVRAGQELARLDDDLLRQQRDQTAAQLAGQKAQLLRLERGYRT----EEVEQARAAV 119

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
              + +      +           +   + L    +  RS        + +  +L +   
Sbjct: 120 ARARAVADNAAINLNRISAMRARNAISQKELDNARSSDRSARAELRSAQEQLDMLLSGYR 179

Query: 194 SHQ 196
             +
Sbjct: 180 EEE 182


>gi|27375801|ref|NP_767330.1| multidrug resistance protein [Bradyrhizobium japonicum USDA 110]
 gi|27348939|dbj|BAC45955.1| blr0690 [Bradyrhizobium japonicum USDA 110]
          Length = 415

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 98/342 (28%), Gaps = 28/342 (8%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L T    E      ++  +   +R  +    S +        V +       + L+    
Sbjct: 87  LATLRFDEWVGNAVIQTTNDAYVRSELTRLASRVSGEVLTVGVTDFQRVKAGDLLIQIDP 146

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             +          +++   +L     ++   Y      +       A+    +++    +
Sbjct: 147 ADYEAQVAQSEAAVAAAQATLDNLANQVELQYATIAQAQAARLSAEAIEVEARQEQERQQ 206

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           +L +  + ++    Q      K+  ++R +          +  L        A+      
Sbjct: 207 SLSQTESGTRQRFEQAVAAYAKAQADVRASRAVIAAQQHQLEVLQGTRKQRAAD------ 260

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
                         + L          TI +P  G +V  +     +Y      L+ +VP
Sbjct: 261 ---------LDATKASLASARLKLGYTTISAPFDG-VVGERQVQPGDYVNIGTNLINVVP 310

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DN 379
             K+  I A     Q+ HV  G    +    +   +    +  +E+I P    Q      
Sbjct: 311 LPKVYVI-ANYKETQLTHVAPGQPVEITVDSFPREK---LRGRVERIAPATGAQVALLPP 366

Query: 380 NLQTQEYYEVILKITDLAFSDNN----IELRNGFPAEVLFTA 417
           +  T  + +V+ +I      D+N      L  G         
Sbjct: 367 DNATGNFTKVVQRIPVRIQLDDNQQLTARLVPGMSVVTSINT 408



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 19/170 (11%), Positives = 57/170 (33%), Gaps = 12/170 (7%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S  SG +    V +  ++  G  L+  +  +    +   + ++   +  +D   + ++  
Sbjct: 118 SRVSGEVLTVGVTDFQRVKAGDLLIQIDPADYEAQVAQSEAAVAAAQATLDNLANQVELQ 177

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                         + Q      +     ++       S+ ++      R          
Sbjct: 178 YATIA---------QAQAARLSAEAIEVEARQEQERQQSLSQTESGTRQRFEQAVAAYAK 228

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            +      RA++++ Q  L +++   ++ A    DL+  +  +  + L+L
Sbjct: 229 AQADVRASRAVIAAQQHQLEVLQGTRKQRAA---DLDATKASLASARLKL 275


>gi|229514965|ref|ZP_04404425.1| membrane-fusion protein [Vibrio cholerae TMA 21]
 gi|229347670|gb|EEO12629.1| membrane-fusion protein [Vibrio cholerae TMA 21]
          Length = 377

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 29/237 (12%)

Query: 18  KRMTLLSIIGIIGLITWSILL-----------------PIEISVSSSGEILNEDNVVEIK 60
           +   L +++G+     +                      IE    + G+I+   + V IK
Sbjct: 4   RWTLLATLVGVGLAGGYYTFAYPPESSSPLPTLNVSRGTIEKQAVAVGQIMPS-HSVAIK 62

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S  +GI+ +  V  G  + QG PL+      T   +      +     +++++   L  L
Sbjct: 63  SQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDASTELMQSEANLESDLQRLANL 122

Query: 121 NN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  ++   ++       D   K      K  N  +     +   +     ++Y   
Sbjct: 123 ERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLELIRSGEASIGQAKLSSTLYAPI 182

Query: 179 LDL---------ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                       E   S   +  ++    L  MKN+  K +VS++D  Q    +  S
Sbjct: 183 SGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFKGSVSEHDAAQLNAGMPAS 239



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 85/223 (38%), Gaps = 31/223 (13%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  ++    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 98  LTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQ 157

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM---------KIV 322
                 S    + + +   T+ +PI+GTI+  +        +  +P++         +++
Sbjct: 158 NLELIRSGEASIGQAKLSSTLYAPISGTILNIK-------VEVGEPIISTESSQAATEMI 210

Query: 323 PHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + +     +  V+      +  G  A++    Y    E+     + K+  I S++ NN
Sbjct: 211 QLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP---EQVINGQLTKV-AIQSERLNN 266

Query: 381 LQTQEYYE----VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++         ++I  L     N+ LR+GF A    T + 
Sbjct: 267 PENKDGKSFDNGFQVEIGQLGI-PENMTLRSGFSASAKITLQR 308


>gi|160896536|ref|YP_001562118.1| RND family efflux transporter MFP subunit [Delftia acidovorans
           SPH-1]
 gi|160362120|gb|ABX33733.1| efflux transporter, RND family, MFP subunit [Delftia acidovorans
           SPH-1]
          Length = 459

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 82/286 (28%), Gaps = 17/286 (5%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +E L+    +              +  RS+      +R        +  + + +   + +
Sbjct: 115 DEGLIAMDAQRMQAAGVRLAEAGPATVRSVLQLPGEIRFNEDRTAHVVPRVAGIAESVPA 174

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           +         L    + +     + E +     LEL    + ++  L       ++  L+
Sbjct: 175 NLGQNVKKGQLLAVLSSAAVSEQRSELLAASKRLELARTTYAREKQLWEEKVSAEQDYLQ 234

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
               L+E    +   Q+  A   +          +  + +P  G IV     S     Q 
Sbjct: 235 ARQALREAEIAVSNAQQKLAATGAGAGGGAGGLNRFELRAPFDGVIVEKHL-SVGEAVQD 293

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           +  +  I    +  +   +V    +  V+ G  ATVR   +           +  +  +I
Sbjct: 294 TTQVFTIS-DLRSVWAEMRVAAPDLPAVRVGEKATVRATAFDSSAT----GEVAYVGALI 348

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            Q                   +   + +   R G    V  TA + 
Sbjct: 349 GQDTRTA-----------PARITLPNPDGVWRPGLFVNVELTASSR 383



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 51/152 (33%), Gaps = 1/152 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI +      G  + +G  L        ++       + K L     T          K 
Sbjct: 167 GIAESVPANLGQNVKKGQLLAVLSSAAVSEQRSELLAASKRLELARTTYAREKQLWEEKV 226

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   ++R+  L +      +   K+   G  +   +  +    +R+ +   +  ++ 
Sbjct: 227 SAEQDYLQARQA-LREAEIAVSNAQQKLAATGAGAGGGAGGLNRFELRAPFDGVIVEKHL 285

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           S       ++    ++ +++++ +  V+  DL
Sbjct: 286 SVGEAVQDTTQVFTISDLRSVWAEMRVAAPDL 317


>gi|294056468|ref|YP_003550126.1| efflux transporter, RND family, MFP subunit [Coraliomargarita
           akajimensis DSM 45221]
 gi|293615801|gb|ADE55956.1| efflux transporter, RND family, MFP subunit [Coraliomargarita
           akajimensis DSM 45221]
          Length = 568

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 104/313 (33%), Gaps = 35/313 (11%)

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
            ++    + A +++E++  D LG++  T  ++    +    +    +    R + L    
Sbjct: 202 RSQRKQKQVAIDTKEQEYYDALGEFDKTNEELAEARL----KDADTREKAERQVMLAEKK 257

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNA---VSQNDLNQQERIVYKSTLELRENIHEQ 237
           L N  +       + ++         E+       + +L   +R + K+  +  +     
Sbjct: 258 LNNALAAWETARKADRQFRRYDHPQTERKLLMNADKTEL-DLKRNLVKAESDRIQAERRY 316

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           + ++R    + D        Y +E+ R   + +        +L  L++      + +P+ 
Sbjct: 317 RKLVRDHQNILDRMEEREEKYTEELERLATEFETKLERLTERLAELKEDYAGLILRAPVD 376

Query: 298 GTIVYNQSFSSSNYAQQS---QPLM--------KIV---PHSKLTYIRAKVTPKQIQHVK 343
           G +      +     ++    + LM        +IV   P      +R  +       ++
Sbjct: 377 GIV------TLGAPPKRGREPKELMVGTNVAPKEIVARIPDLSQFLVRCDIPEIYRSRIQ 430

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G  A ++     D+   + +  I +I  +  + +            +  T ++    + 
Sbjct: 431 TGQIALLKNAALPDL---EMQGRINEIATMSQRLNRWDARSP----RVYETKISTETTDA 483

Query: 404 ELRNGFPAEVLFT 416
            L  G   EV   
Sbjct: 484 RLMPGMTVEVEIK 496


>gi|291527158|emb|CBK92744.1| Membrane-fusion protein [Eubacterium rectale M104/1]
          Length = 521

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 49/379 (12%), Positives = 125/379 (32%), Gaps = 36/379 (9%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I       + +  V    Q+  G  LL ++    +  +++K++ I++L   + +EK  
Sbjct: 66  QTINLKDGQKVTEVYVTKDQQVKAGDKLLAYDVTSLSLSVEMKQLEIQSLENQLASEKQK 125

Query: 117 LDFLNNKYDVLEKA-----FESREEQLLDFLGKYHSTCSKVFNY-GISSVYRSLKMKLTR 170
           LD L N   V ++       E + +       + H   S +    GI +         T 
Sbjct: 126 LDKLKNTKPVEKQPETPVTPEPQPDTQPSAPDEQHDVISDLSEAKGIGTEDDPYVFTCTE 185

Query: 171 MRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
              +    L+  ++ S +   +   ++  D+ ++          ++D  +       +  
Sbjct: 186 ASYVSGALLNTLSEKSAVARFVIGDANAPDMELIVRGDRLGGYDESDEIKLFLAGTTTAG 245

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLK--------EISRDLEQNQRTFADEMSKL 280
           +  ++    +      +   ++     A+           E+   +++  R+ AD   + 
Sbjct: 246 DASDDTEGSEPSDTKTDSATEQTAQTEADTAAEEKTYTADELKDAIKEQTRSVADVDLQK 305

Query: 281 TILEKTREQKTILSPIAGTIVYNQ----SFSSSNYAQQ---SQPLMKIVPHSKLTYIRAK 333
            I +   +   + S +   +VY +      +  + A       P +++   +   YI   
Sbjct: 306 RIAQADLK--ELQSELEDGVVYAKKDGIVTTVCDPANPPKDGTPFLQLS-GASGLYISGT 362

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ------QDNNLQTQEYY 387
           +    +  VK G +          +    +   I +I  + S         N   +   Y
Sbjct: 363 IGELDLDTVKIGQSV----SAVNYMTGDTYDGTISEISNVPSDSVNYYGDSNPNSSFYEY 418

Query: 388 EVILKITDLAFSDNNIELR 406
              ++        +++EL 
Sbjct: 419 TAYIENPQNLKKGDSLELT 437


>gi|257784034|ref|YP_003179251.1| efflux transporter, RND family, MFP subunit [Atopobium parvulum DSM
           20469]
 gi|257472541|gb|ACV50660.1| efflux transporter, RND family, MFP subunit [Atopobium parvulum DSM
           20469]
          Length = 465

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 69/207 (33%), Gaps = 13/207 (6%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR-DLEQNQRTFADE 276
           QQ +       + R  +   +N +  + E   EAN        E +  +LE  Q    + 
Sbjct: 165 QQVKAAENEVSKARSALVSARNGVSEVGENGQEANAASGAAAVEAAEANLESAQIALEEA 224

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QS----QPLMKIVPHSKLTYI 330
            S         +++ + +P  GT++   + + ++            PL+ I        +
Sbjct: 225 RSAYNDAVDQADKRVVTAPCDGTVIVMNAVNGASVGSSAPGSGNSGPLITIA-DLSQMKV 283

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--EYYE 388
             ++    I  +     A V F    D+      A++  +  + S   +   +       
Sbjct: 284 NVQINEVDISRIAADQKAQVTFTALRDLY---CDAVVTHVSAVSSSGADASTSYDSPGRS 340

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLF 415
           ++    DL  S  +  ++ G  A V  
Sbjct: 341 IVSYTVDLLISSPDASIKPGMTANVDI 367



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 1/79 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS+SG I    +   +    +GII+  QV  GS + +G  L T ++ E    +      +
Sbjct: 109 VSASGSIKPISST-VVTPEVNGIIQDVQVTEGSTVKKGDKLFTIKNDELDKAVRKAAQQV 167

Query: 104 KNLRCHIDTEKSALDFLNN 122
           K     +   +SAL    N
Sbjct: 168 KAAENEVSKARSALVSARN 186


>gi|218705885|ref|YP_002413404.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli UMN026]
 gi|298381571|ref|ZP_06991170.1| multidrug resistance protein K [Escherichia coli FVEC1302]
 gi|218432982|emb|CAR13877.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli UMN026]
 gi|298279013|gb|EFI20527.1| multidrug resistance protein K [Escherichia coli FVEC1302]
          Length = 387

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLVLKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLVLKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|104783519|ref|YP_610017.1| multidrug efflux MFS membrane fusion protein [Pseudomonas
           entomophila L48]
 gi|95112506|emb|CAK17233.1| putative multidrug efflux MFS membrane fusion protein [Pseudomonas
           entomophila L48]
          Length = 353

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 70/216 (32%), Gaps = 18/216 (8%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + L +Q     ++  + R  + + +  L +          +      +++          
Sbjct: 138 SRLAEQGAGTVQNAQQARSRVDQARARLANTQAALVATRKQVDILQAQVAS----ADGQL 193

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               + L   +       I +P+ G +   ++     Y      L+ +VP ++   +   
Sbjct: 194 KRAEAGLEKAQLDLSYTRITAPVDGMV-GERALRVGAYVNPGARLLSVVPLARAYIV-GN 251

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEV 389
               Q+ HV+ G   ++    ++    +K +  +E I P      +    +  T  + +V
Sbjct: 252 FQETQLTHVQPGQPVSITVDTFS---GEKLQGHVESIAPATGVTFAAVKPDNATGNFTKV 308

Query: 390 ILKITDLAFSDNN----IELRNGFPAEVLFTA-KNT 420
           + +I      D+       LR G   E       + 
Sbjct: 309 VQRIPVKIVFDDGQPLRERLRVGMSVEATIDTQGDR 344



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 60/217 (27%), Gaps = 6/217 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK-----VSIKNL 106
              +   +    +G +K+  VE+  Q+  G  L T +  +    +D  +        ++L
Sbjct: 41  VTADYTVVAPKVAGFVKEVLVEDNQQVKAGQLLATIDARDYQAALDAAQAQLLVAKAQSL 100

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                 E+ A      +  V     E+             +                +  
Sbjct: 101 DARATLERQAALIAQAEAAVKAAQAEAAFADHEVTRYSRLAEQGAGTVQNAQQARSRVDQ 160

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+ +     +    +  +L+A ++S    L   +   EK  +  +   +    V   
Sbjct: 161 ARARLANTQAALVATRKQVDILQAQVASADGQLKRAEAGLEKAQLDLS-YTRITAPVDGM 219

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             E    +    N    +  +   A        +E  
Sbjct: 220 VGERALRVGAYVNPGARLLSVVPLARAYIVGNFQETQ 256


>gi|75910932|ref|YP_325228.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75704657|gb|ABA24333.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 510

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 76/258 (29%), Gaps = 22/258 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  VE G  +  GTPL   +  +            +     +   ++         
Sbjct: 111 GKVVQLAVEAGQWVSAGTPLARLDTSQLMAQKQELLAQKQQALFQLRELQAG------PR 164

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   +R  Q    L +  S           +   +L+ +L         R  L N+
Sbjct: 165 AETIDTARARLAQERALLKEMQSGPRIQTIAAARANVNNLQEQLELAHGKSKRREALYNQ 224

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            ++ R        D+   +   ++     ++L    R        +       K     +
Sbjct: 225 GAIAREQFDEAITDVNSQQARVKQAQSQLDELLAGTRSEV-----ITAQQARVKQAQSQL 279

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +EL      E     +   + L+          S+LT LE   E+  + +P +G +   +
Sbjct: 280 DELLAGTRSEVIEAQQAALKQLQ----------SRLTSLELDLEKSVLKAPFSGKVSQ-R 328

Query: 305 SFSSSNYAQQSQPLMKIV 322
                      Q + ++V
Sbjct: 329 YLDLGTAVSSGQAIARLV 346


>gi|295691500|ref|YP_003595193.1| HlyD family protein [Caulobacter segnis ATCC 21756]
 gi|295433403|gb|ADG12575.1| secretion protein HlyD family protein [Caulobacter segnis ATCC
           21756]
          Length = 367

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 95/316 (30%), Gaps = 13/316 (4%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E +   F+      +         ++L    +       +     S+    +   +    
Sbjct: 37  ESTDNAFVQADTVQISPQVSGYVAEVLVADNQRVEAGQVLAKIDPSTFQAIVDQAIANAN 96

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +       +++K+SL +A+++     +T  +    +        N      + S  +++ 
Sbjct: 97  AADAAVRAIDDKNSLEQAMIAQRAAGVTSARADAGRATADLERYNALAAQGWVSQQKVQT 156

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                      +         E       +    +Q     A   + +   +   E+  I
Sbjct: 157 ERAAATQTAASVASAQAALEAERRAAQS-LGSAKDQAIAQAAAAHAAVEQAKLNLERTVI 215

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P AG +V  +S       Q    LM +VP  +   + A     Q+  ++ G    ++ 
Sbjct: 216 RAPAAG-VVGARSVRPGQLVQPGVALMSVVPLGQAYVV-ANFKETQVARIRVGQPVEIKA 273

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIEL 405
             +   +       I+   P   Q+            + ++  ++     +  S     L
Sbjct: 274 DAFGKEK---IVGKIDSFAPATGQEFALIPVENAVGNFTKITQRLPVKIAVDRSQLGAAL 330

Query: 406 RNGFPAEVLFTAKNTT 421
           R G   EV    ++ +
Sbjct: 331 RPGLSVEVKVDVRDRS 346


>gi|260459369|ref|ZP_05807624.1| secretion protein HlyD family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259034923|gb|EEW36179.1| secretion protein HlyD family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 350

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 81/269 (30%), Gaps = 32/269 (11%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           D   K     A LS+ Q D+  ++   +           QER V    L  R N+     
Sbjct: 65  DYRAKLDQAIATLSTRQADIANIEATQKLQDALIGQAAAQERSVSADLLFARANLDRYTA 124

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS--------------------K 279
           + +       +       + K  + D      T A ++                      
Sbjct: 125 LQKSGTASEQKLQDAQTGFAKAEAADKAAAANTLAQKLRLGVLEAQLAGAQAAMAQAKAS 184

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           +++         I SPI G +V N+      Y     P M IVP   +  + A     Q+
Sbjct: 185 VSLARMDLANTLIQSPIDG-VVGNRQVRVGRYVTPGTPAMDIVPVQDVWVV-ANFKETQL 242

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT- 394
             ++ G    V    Y  ++      +++   P           +  T  +  V+ ++  
Sbjct: 243 DRMEIGQPVRVMIDEYPGVQ---IDGVVDSFAPGSGAAFSVLPPDNATGNFIRVVQRVPV 299

Query: 395 DLAFSDNNI--ELRNGFPAEVLFTAKNTT 421
            +  + N +   L  G  A +       T
Sbjct: 300 KIRLTHNPLPGRLVPGLSARIAVRVGRAT 328



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 37/127 (29%), Gaps = 3/127 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFL 120
           SG + +  V + + + +G  L   +D +    +D    ++   +    +I+  +   D L
Sbjct: 38  SGYVVEVPVGDNAGVRKGNLLFRIDDSDYRAKLDQAIATLSTRQADIANIEATQKLQDAL 97

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +    E++  +        L +Y +                                 
Sbjct: 98  IGQAAAQERSVSADLLFARANLDRYTALQKSGTASEQKLQDAQTGFAKAEAADKAAAANT 157

Query: 181 LENKSSL 187
           L  K  L
Sbjct: 158 LAQKLRL 164


>gi|228471904|ref|ZP_04056674.1| periplasmic component of efflux system [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228276756|gb|EEK15462.1| periplasmic component of efflux system [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 408

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 72/220 (32%), Gaps = 19/220 (8%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL--KEI 262
            +K   +++ D    +  V  +       ++E     ++     +  + +  +    ++ 
Sbjct: 82  VKKGELLAELDKTNLQENVINAQANYNAALNEVTYYQQNYERKKNMYDNQIISKADYEQA 141

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLM 319
              L   +      ++ L          +I +PI G I+  +             +  L 
Sbjct: 142 YYQLHNAKAAVTQRLTMLNQARTNLGYASIYAPIDGIILSKEV-EVGQTVAATMSAPTLF 200

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           KI    K   + A V    I  VK G   T     Y     ++F+  + ++  +     +
Sbjct: 201 KIAKDIKKMQVEANVDEADIGQVKVGQRVTFTVDAYP---LEEFQGEVSQV-RLSPTTTS 256

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           N+ T   Y VI+        +   +L+ G  A ++     
Sbjct: 257 NVVT---YTVIVD-----AQNPQEKLKPGLTATIVIYTNE 288



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 50/131 (38%), Gaps = 4/131 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+++G +   D + E+ +  SG++ K  V+  SQ+ +G  L   +     + +   + + 
Sbjct: 49  VTATGSVQPVDEI-EVGTQVSGLVSKIYVDYNSQVKKGELLAELDKTNLQENVINAQANY 107

Query: 104 KNLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 +   +   +   N YD   + +  +E    QL +         + +     +  
Sbjct: 108 NAALNEVTYYQQNYERKKNMYDNQIISKADYEQAYYQLHNAKAAVTQRLTMLNQARTNLG 167

Query: 161 YRSLKMKLTRM 171
           Y S+   +  +
Sbjct: 168 YASIYAPIDGI 178


>gi|221638654|ref|YP_002524916.1| secretion protein HlyD family protein [Rhodobacter sphaeroides
           KD131]
 gi|221159435|gb|ACM00415.1| Secretion protein HlyD family protein [Rhodobacter sphaeroides
           KD131]
          Length = 368

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 71/257 (27%), Gaps = 26/257 (10%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            +  + +     + +  L     +    +L   + L +K   S   L+       ++   
Sbjct: 116 EVEQLRVAYAQAQAQEKLAADDAAYLANELERQRALSQKGVASTTSLDDARHESLRA--- 172

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                       + +  +  +        L  ++             ++          +
Sbjct: 173 ------------KELLLVARQTTASALAALGGVADGPVDEHPKVRTALAARDDAAYQLAR 220

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P  G +    SF         Q L  +V      +I A     Q+  +  G  A 
Sbjct: 221 TEVRAPADGIVYQAASFKPGQMVTAGQSLFSLVETGD-VWIDANFKETQLAGIAPGQKAE 279

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE----- 404
           V F  + D      +A +E +      + + L  Q      +K+T         E     
Sbjct: 280 VTFDLHPDRPY---EATVEAVGAGTGSEFSLLPAQNATGNWVKVTQRVPVRLRFEEGADI 336

Query: 405 --LRNGFPAEVLFTAKN 419
             L +G  AEV      
Sbjct: 337 AGLASGLSAEVSVDTGR 353



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/157 (9%), Positives = 47/157 (29%), Gaps = 5/157 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V +   + +G  L   +       +   + ++ + R  ++  + A      +
Sbjct: 71  SGRVTRVSVSDNRPVSKGEVLFEIDPEPHRIALAKAEAAVASARLEVEQLRVAYAQAQAQ 130

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +          +L     +     S+      +S+  +    L     + + R    +
Sbjct: 131 EKLAADDAAYLANEL-----ERQRALSQKGVASTTSLDDARHESLRAKELLLVARQTTAS 185

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             + L  +      +   ++        +   L + E
Sbjct: 186 ALAALGGVADGPVDEHPKVRTALAARDDAAYQLARTE 222


>gi|330980688|gb|EGH78791.1| secretion protein HlyD [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 390

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+       +  L +  +I +  W IL                IE SV++ G +    
Sbjct: 1   MKRSRHPRRALLVALCLFPVIAVCAWQILPDSKGSAATVTVTRGTIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  SG I K   + G Q+ +G  L+  +       +D  + +I NL+  +  ++
Sbjct: 61  YV-DVGSQASGQIMKIHAQVGDQVKEGDLLVEIDPSTQKAKLDAARYAIDNLKAQLQEQR 119

Query: 115 SALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    K      L     +R E +     ++ +T ++V  F   I     +L+    
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEAQAALRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 AL 181



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 10/212 (4%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIFAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWSSTVRQILPVPPRPLDQANQGGGSPSSSRKNGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            V+L    L   +++  L     A++ F A+ 
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTAQIFFVAEK 321


>gi|315224752|ref|ZP_07866575.1| efflux transporter, RND family, MFP subunit [Capnocytophaga
           ochracea F0287]
 gi|314945380|gb|EFS97406.1| efflux transporter, RND family, MFP subunit [Capnocytophaga
           ochracea F0287]
          Length = 427

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 80/233 (34%), Gaps = 19/233 (8%)

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + +++ +++A S   +    +    +  E  E+    K +      +  +++ + A   
Sbjct: 109 DIYQSVVKRSAASLETVRASLQQSSATLKEAEESYKRNKVLFDK--GVISKSDWDKAVSA 166

Query: 260 KEISRDLEQNQR-TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----Q 314
            E+++   ++ R      M+ ++  +   ++  I SP  GTI                  
Sbjct: 167 YEVAKASRESARFNVQSAMASVSEAQDNLKKTIIYSPTDGTISKLSVELGERVVGTMQMT 226

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              +M+ V +     +   V    I  +  G +  V    Y    ++ FK  +  I    
Sbjct: 227 GTEIMR-VANLHNMEVEVDVNENDIVKISVGDSVNVEVDAY---LKRVFKGTVTNIANTA 282

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNI-------ELRNGFPAEVLFTAKNT 420
           +   +  Q   + +V + I + ++ D +          R G  A V    +  
Sbjct: 283 NTTTSADQVTNF-KVKIHIEEASYKDLSESKPVGYSPFRPGMTATVDIITQTK 334



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 50/140 (35%), Gaps = 6/140 (4%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS++G+I  E  +  I S  SG I +  V+ G  + +G  L+         ++     S+
Sbjct: 64  VSATGKIQPELEIK-ISSEVSGEIIELPVKEGQMVKKGDLLVRINPDIYQSVVKRSAASL 122

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           + +R  +    + L      Y   +  F+       D            +    +S   +
Sbjct: 123 ETVRASLQQSSATLKEAEESYKRNKVLFDKGVISKSD-----WDKAVSAYEVAKASRESA 177

Query: 164 LKMKLTRMRSIYLNRLDLEN 183
                + M S+   + +L+ 
Sbjct: 178 RFNVQSAMASVSEAQDNLKK 197


>gi|300936940|ref|ZP_07151824.1| efflux pump membrane protein [Escherichia coli MS 21-1]
 gi|300457946|gb|EFK21439.1| efflux pump membrane protein [Escherichia coli MS 21-1]
          Length = 387

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 83/232 (35%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K   LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSDRKKYFALLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|215487632|ref|YP_002330063.1| EmrKY-TolC multidrug resistance efflux pump protein K, membrane
           fusion protein component [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312967657|ref|ZP_07781872.1| multidrug resistance protein K [Escherichia coli 2362-75]
 gi|215265704|emb|CAS10109.1| EmrKY-TolC multidrug resistance efflux pump protein K, membrane
           fusion protein component [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312287854|gb|EFR15759.1| multidrug resistance protein K [Escherichia coli 2362-75]
 gi|323944866|gb|EGB40932.1| efflux pump membrane protein [Escherichia coli H120]
          Length = 387

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|57340014|gb|AAW49994.1| hypothetical protein FTT0018 [synthetic construct]
          Length = 392

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)

Query: 242 RHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +Y++A +E  NY +E+++   DL + +   A + S+L           + +P  G
Sbjct: 162 ASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL-----------VKAPSDG 210

Query: 299 TIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT-------- 349
            IV  +         + +  L  IVP SK   +   V    +  VK G            
Sbjct: 211 VIVD-RIHGLGGVIVKDTDVLATIVPDSKSRIVELWVNSMDVPLVKIGDKVMLQFEGWPA 269

Query: 350 VRFPHYADIREKKFKAIIEKIDP 372
           V+F  +  +    F+  +  I P
Sbjct: 270 VQFSGWPQVAIGTFEGEVIFISP 292



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLK---KVS 102
            +   +    I +P  G + K+ V  G  + +G P++     +    + L + K   ++ 
Sbjct: 77  TLSPSERQQNISAPIGGRLGKWYVFEGDSVKKGDPIVEVLDLDPEVVSRLEEEKSAIELG 136

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I +++  I   K+ ++   +KY V + A   R  +        ++      N  ++ V  
Sbjct: 137 INSVKLAIKNTKNNIE--RHKYLVDKGASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKV 194

Query: 163 SLKMKLTRM 171
            +  + +R+
Sbjct: 195 QIARQQSRL 203


>gi|114321295|ref|YP_742978.1| RND family efflux transporter MFP subunit [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227689|gb|ABI57488.1| efflux transporter, RND family, MFP subunit [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 417

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 75/220 (34%), Gaps = 26/220 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL----------YDEANLEFANYLKEI 262
           + ++   E  ++ +  EL   +   +  ++  +             DE + E A+Y +++
Sbjct: 128 RIEVEDAEAALWGAKAELASALGRYQRAIQQRDRAERLYREDLIPRDERDQERAHY-EDM 186

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMK 320
              LE  +        +L       +   + SPI G ++   +    +        P+  
Sbjct: 187 RAALETARAHVRQAEIRLEQARDNLQHTEVRSPIDGRVLNIAA-ELGDRVAPGGQTPVFT 245

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +    +   +R +V    I  ++ G         Y   R++ F A + ++ P   ++   
Sbjct: 246 VAAGLEPMELRLEVNEADIGKIRAGQRIRFNVEAY---RQEDFHAEVRRVLPGGYER--- 299

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +  + YEV          + +  L  G   +     + T
Sbjct: 300 -RGVQVYEVRAD-----AENPHHRLMPGMSVQARIHIEQT 333


>gi|167038399|ref|YP_001665977.1| RND family efflux transporter MFP subunit [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320116803|ref|YP_004186962.1| RND family efflux transporter MFP subunit [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|166857233|gb|ABY95641.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319929894|gb|ADV80579.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
          Length = 529

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 50/383 (13%), Positives = 122/383 (31%), Gaps = 36/383 (9%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I + V+ +G +    +V  I    SG +KK   + G  + +G  L   ED +  + ++
Sbjct: 42  GNISMEVTGTGNL--SGDVRAITLKGSGTVKKVYFKVGDTVKKGDLLYEIEDDDLNNQLE 99

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K+++   +  ++ EK   +    K  +   +    +  + +                 
Sbjct: 100 EAKLNLDLAQQQLNQEKQNYNNSLAKLSITAPSDGVVQVLVKEG------------QDVT 147

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
             +  ++    ++      N       S  + A ++   + + + +       V +  L 
Sbjct: 148 PGMPVAIIGDNSKENETAENNGQTTQNSVNVTAQIAGTVEKVYVSQG----QNVKKGQLL 203

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            +      S  +++    + K      N++  + +         I   +        D +
Sbjct: 204 IKLSSNNISDAQIKNAELKLKQAQNQYNQILQQIDN--LKIYSPIDGKILSQNINEGDIL 261

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
              ++           S  AG +        S Y  Q +  + IV  +    +   V   
Sbjct: 262 GT-SVASTNISNTNSQSQQAGFVPVLDITQLSTYESQPETAV-IV-GNSNYVVNLSVDET 318

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I+++K G  A +      ++  K F   + ++  + + Q+        Y V +++    
Sbjct: 319 DIKNIKVGQQAQL---TTDNLPGKTFTGTVSQVSQLPTIQNGVAS----YNVTIEVEPSE 371

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
                 +L  G    V  T    
Sbjct: 372 ------DLLLGMSMNVSITVAEK 388


>gi|330878740|gb|EGH12889.1| multidrug resistance protein [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 402

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 87/259 (33%), Gaps = 32/259 (12%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + S   +L   + ++R +Y N   ++ + +  R  + + Q +    ++L    A+SQ +L
Sbjct: 104 LQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRTAVQTAQDNYNRRRSLAAGGAISQEEL 163

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           +     +  +    +  ++  +  L     L D+  +     +K  +  L Q     A  
Sbjct: 164 SHARDSLTSA----QSALNNIQQQLSTSVALVDDTVVSSHPDVKAAAAQLRQAFLANA-- 217

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                       + T+++P+ G +   +S       Q     M ++P     +I A    
Sbjct: 218 ------------RSTLVAPVTGYVAK-RSVQLGQRIQPGTATMAVIPLD-QLWIDANFKE 263

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQ-----EY 386
            Q+  ++ G    +    Y      K+   I+ +              N         + 
Sbjct: 264 TQLGKMRIGQPVEISSDLYGSDV--KYSGTIDSLGAGTGSAFALLPAQNATGNWIKIVQR 321

Query: 387 YEVILKITDLAFSDNNIEL 405
             V + I     + + + +
Sbjct: 322 VPVRVHINPEELAQHPLRI 340



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 49/142 (34%), Gaps = 9/142 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVVEI    +G +     ++G  + +G  LL F+  +    +   + ++  +   + 
Sbjct: 60  VNGNVVEITPLVTGTVISIGADDGDLVHEGQVLLQFDPSDAAVSLQSAEANLGKVVRQVR 119

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              S +D +  +      A ++          + +    +    G +     L      +
Sbjct: 120 GLYSNVDGMKAQLAAQRTAVQT---------AQDNYNRRRSLAAGGAISQEELSHARDSL 170

Query: 172 RSIYLNRLDLENKSSLLRALLS 193
            S      +++ + S   AL+ 
Sbjct: 171 TSAQSALNNIQQQLSTSVALVD 192


>gi|330875749|gb|EGH09898.1| secretion protein HlyD [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
 gi|330968018|gb|EGH68278.1| secretion protein HlyD [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 390

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+       +  L +  +I +  W IL                IE SV++ G +    
Sbjct: 1   MKRSRHPRRALLVALCLFPVIAVCAWQILPDAKGHASTVTVTRGTIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  SG I K   + G Q+ +G  L+  +       +D  + +I NL+  +  ++
Sbjct: 61  YV-DVGSQASGQILKIHAQVGDQVKEGDLLVEIDPSTQKAKLDAARYAIDNLKAQLQEQR 119

Query: 115 SALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    K      L     +R E +     ++ +T ++V  F   I     +L+    
Sbjct: 120 ALHELAEQKQQRQKSLAAGGATRAEDVQAAQSEFRATQARVDMFKAQILEAQAALRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 AL 181



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 10/212 (4%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKSLAAGGATRAEDVQAAQSEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIFAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWSSTVRQILPVPPRPLDQANQGGGSPSSSRKSGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            V+L    L   +++  L     A++ F A  
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTAQIFFVAGK 321


>gi|323156375|gb|EFZ42532.1| multidrug resistance protein K [Escherichia coli EPECa14]
          Length = 346

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 52  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 111

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 112 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 153

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 154 AADATKEAWLALKRTDIRSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 211

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 212 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 269

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 270 RVPVEVSLDPKELMEHPLRIGLSMTATID 298


>gi|332557675|ref|ZP_08411997.1| Secretion protein HlyD family protein [Rhodobacter sphaeroides
           WS8N]
 gi|332275387|gb|EGJ20702.1| Secretion protein HlyD family protein [Rhodobacter sphaeroides
           WS8N]
          Length = 368

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 71/257 (27%), Gaps = 26/257 (10%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            +  + +     + +  L     +    +L   + L +K   S   L+       ++   
Sbjct: 116 EVEQLRVAYAQAQAQEKLAADDAAYLANELERQRALSQKGVASTTSLDDARHESLRA--- 172

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                       + +  +  +        L  ++             ++          +
Sbjct: 173 ------------KELLLVARQTTASALAALGGVADGPVDEHPKVRTALAARDDAAYQLAR 220

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P  G +    SF         Q L  +V      +I A     Q+  +  G  A 
Sbjct: 221 TEVRAPADGIVYQAASFKPGQMVTAGQSLFSLVETGD-VWIDANFKETQLAGIAPGQKAE 279

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE----- 404
           V F  + D      +A +E +      + + L  Q      +K+T         E     
Sbjct: 280 VTFDLHPDRPY---EATVEAVGAGTGSEFSLLPAQNATGNWVKVTQRVPVRLRFEEGADI 336

Query: 405 --LRNGFPAEVLFTAKN 419
             L +G  AEV      
Sbjct: 337 AGLASGLSAEVSVDTGR 353



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/157 (9%), Positives = 47/157 (29%), Gaps = 5/157 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V +   + +G  L   +       +   + ++ + R  ++  + A      +
Sbjct: 71  SGRVTRVSVSDNRPVTKGEVLFEIDPEPHRIALAKAEAAVASARLEVEQLRVAYAQAQAQ 130

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +          +L     +     S+      +S+  +    L     + + R    +
Sbjct: 131 EKLAADDAAYLANEL-----ERQRALSQKGVASTTSLDDARHESLRAKELLLVARQTTAS 185

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             + L  +      +   ++        +   L + E
Sbjct: 186 ALAALGGVADGPVDEHPKVRTALAARDDAAYQLARTE 222


>gi|293446740|ref|ZP_06663162.1| multidrug resistance protein K [Escherichia coli B088]
 gi|291323570|gb|EFE62998.1| multidrug resistance protein K [Escherichia coli B088]
          Length = 387

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|254425815|ref|ZP_05039532.1| ABC exporter membrane fusion protein, DevB family [Synechococcus
           sp. PCC 7335]
 gi|196188238|gb|EDX83203.1| ABC exporter membrane fusion protein, DevB family [Synechococcus
           sp. PCC 7335]
          Length = 400

 Score = 67.3 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 123/338 (36%), Gaps = 42/338 (12%)

Query: 43  SVSSSGEILNEDNVVEIKSPFS--GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +V++ G +  +  VV++  P +    + +  VE G  +     +   +       +D K+
Sbjct: 53  AVTALGRLEPQGEVVKLSVPNAADSRVNQILVEEGDWVDAEEIIAVLQG------LDKKQ 106

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +                             +++   + +  +  +   +     I++ 
Sbjct: 107 AELAA---------------------------AQQNAAIYWAKQVQARTGEAKLADIAAQ 139

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              L    +R+++    R   + +    +A L + +++    + L ++ AV    L+ + 
Sbjct: 140 QAVLTQLASRLQTETAER---QAEQVRAQAALQNAEQNYYRYEQLHQQGAVETAVLDDRR 196

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            +   +   L        N +  +     +     A   +    DL+  Q      ++++
Sbjct: 197 EVFETAQASLNVAKARLANTVSTLQAQLRQEQALLARLQEVRPVDLQVAQAELNYAIAQV 256

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
             +E   E   +  P AG I+   +         S+ ++++   +++T I AKV    + 
Sbjct: 257 KRIEAELEDLYVRVPRAGQILKINTH-IGEQVNISEGIVELGQTNQMTAI-AKVYETDVS 314

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            V+ G  AT+   H     E +   ++E+I   I++QD
Sbjct: 315 LVQLGQRATIVSEHGGF--EGEIHGVVEQIGMQINKQD 350


>gi|302188917|ref|ZP_07265590.1| secretion protein HlyD [Pseudomonas syringae pv. syringae 642]
          Length = 390

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+       +  L +  +I +  W IL                IE SV++ G +    
Sbjct: 1   MKRSRHPRRALLVALCLFPVIAVCAWQILPDSKGSAATVTVTRGTIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  SG I K   + G Q+ +G  L+  +       +D  + +I NL+  +  ++
Sbjct: 61  YV-DVGSQASGQIMKIHAQVGDQVKEGDLLVEIDPSTQKAKLDAARYAINNLKAQLQEQR 119

Query: 115 SALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    K      L     +R E +     ++ +T ++V  F   I     +L+    
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEAQAALRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 AL 181



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 76/220 (34%), Gaps = 26/220 (11%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIFAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI---------------ISQQDN 379
           +   I HVK G TA   F   +    +++ + + +I P+                S + N
Sbjct: 230 SEADIGHVKPGMTAY--FTTLSGG-TRRWSSTVRQILPVPPRPLDQANQGGGSPSSSRKN 286

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                  Y V+L +      +++  L     A++ F A  
Sbjct: 287 GGGRVVLYTVLLDVD-----NSDQALMAEMTAQIFFVADK 321


>gi|270292552|ref|ZP_06198763.1| efflux transporter, RND family, MFP subunit [Streptococcus sp.
           M143]
 gi|270278531|gb|EFA24377.1| efflux transporter, RND family, MFP subunit [Streptococcus sp.
           M143]
          Length = 385

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 93/259 (35%), Gaps = 19/259 (7%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKN 239
           L+     +  +L S    +   + L + N+  +Q+  +   R + K+   + +    + N
Sbjct: 76  LDASKGEVDEILVSVGDKVDKGQALVKYNSTEAQSAYDAANRAIAKADRRINDLKESRNN 135

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L    E  D A     + +  I   +   + + AD  ++L   +   +   +LS + GT
Sbjct: 136 TLADSEEYDDGAQ---GSSVSSIDSQISDARDSRADAEAQLKKAQAQLDATKVLSTLEGT 192

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +V      S +    +Q ++ +V  +    ++ +++   + ++  G   T  F       
Sbjct: 193 VVEVNRNVSKSTTAANQVMVHVV-SNDNLQVKGELSEYNLANLSVGQEVT--FSSKVYQD 249

Query: 360 EKKFKAIIEKIDPI------ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            K +   I  I          +       T   Y   +++T         +LR GF   V
Sbjct: 250 -KTWTGKISFISAYPKNSGEGTNAITGGNTGSKYPYTIEVTSEI-----GDLRPGFTVSV 303

Query: 414 LFTAKNTTLAQEIIHPITD 432
              +   ++   +   IT+
Sbjct: 304 EVKSDKKSILVPLTSVITE 322



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 41/130 (31%), Gaps = 6/130 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  SV  SG +  ++          G + +  V  G ++ +G  L+ +   E     D  
Sbjct: 56  VASSVLLSGTVTAKNEQYVYLDASKGEVDEILVSVGDKVDKGQALVKYNSTEAQSAYD-- 113

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
                  R     ++   D   ++ + L  + E  +      +    S  S   +    +
Sbjct: 114 ----AANRAIAKADRRINDLKESRNNTLADSEEYDDGAQGSSVSSIDSQISDARDSRADA 169

Query: 160 VYRSLKMKLT 169
             +  K +  
Sbjct: 170 EAQLKKAQAQ 179


>gi|251792945|ref|YP_003007671.1| multidrug resistance protein A [Aggregatibacter aphrophilus NJ8700]
 gi|247534338|gb|ACS97584.1| multidrug resistance protein A [Aggregatibacter aphrophilus NJ8700]
          Length = 386

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 85/273 (31%), Gaps = 32/273 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +    +    +L   + ++  +      LE      +  L+  Q DL   + L +  A+ 
Sbjct: 93  YQLSFNQAQNTLASAVRQISQLSYTVKQLEATVQANQTALTKAQGDLARRELLGKSGAID 152

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L      V  +   L+   ++       +  +  +   E    +  + +        
Sbjct: 153 KESLQHAREAVMTAEANLKAVKNQLAANKSLLMNVPLKEQPEIQKAISSVKQAWL----- 207

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                          ++  I SP+ G +   +S            LM I+  ++  ++ A
Sbjct: 208 -------------NLQRTKITSPVDGYVAR-RSTQVGQKVAVGSALMAII-SNEQMWVDA 252

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--------DPIISQQDNNLQTQ 384
                Q++ ++ G    + F  Y      KF   +E I          + +Q       +
Sbjct: 253 NFKETQLKDMRIGQPVKLSFDLYGHDV--KFDGKVEGIEMGTGSAFSLLPAQNATGNWIK 310

Query: 385 EYYEVILKITDLAFSDNNIELRNGFP--AEVLF 415
               V ++I+  A    N  LR G     EV  
Sbjct: 311 VVQRVPVRISLDAQQIANYPLRMGLSTLVEVNI 343



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 63/161 (39%), Gaps = 9/161 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V I S  +G +++   EN   +  G  LL  +D +     +  + ++ +    I 
Sbjct: 53  VSGNQVMISSQIAGNVRQINAENMDFVHAGDVLLELDDTDYQLSFNQAQNTLASAVRQIS 112

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSV------YRS 163
                +  L       + A    +  L   + LGK  +   +   +   +V       ++
Sbjct: 113 QLSYTVKQLEATVQANQTALTKAQGDLARRELLGKSGAIDKESLQHAREAVMTAEANLKA 172

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           +K +L   +S+ +N + L+ +  + +A+ S  Q  L + + 
Sbjct: 173 VKNQLAANKSLLMN-VPLKEQPEIQKAISSVKQAWLNLQRT 212


>gi|153213353|ref|ZP_01948742.1| membrane-fusion protein [Vibrio cholerae 1587]
 gi|153803441|ref|ZP_01958027.1| membrane-fusion protein [Vibrio cholerae MZO-3]
 gi|124116006|gb|EAY34826.1| membrane-fusion protein [Vibrio cholerae 1587]
 gi|124121034|gb|EAY39777.1| membrane-fusion protein [Vibrio cholerae MZO-3]
          Length = 377

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 29/237 (12%)

Query: 18  KRMTLLSIIGIIGLITWSILL-----------------PIEISVSSSGEILNEDNVVEIK 60
           +   L +++G+     +                      IE    + G+I+   + V IK
Sbjct: 4   RWTLLATLVGVGLAGGYYTFAYPPESSSPLPTLNVSRGTIEKQAVAVGQIMPS-HSVAIK 62

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S  +GI+ +  V  G  + QG PL+      T   +      +     +++++   L  L
Sbjct: 63  SQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDASTELMQSEANLESDLQRLANL 122

Query: 121 NN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  ++   ++       D   K      K  N  +     +   +     ++Y   
Sbjct: 123 ERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLELIRSGEASIGQAKLSSTLYAPI 182

Query: 179 LDL---------ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                       E   S   +  ++    L  MKN+  K +VS++D  Q    +  S
Sbjct: 183 SGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFKGSVSEHDAAQLNAGMPAS 239



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 87/225 (38%), Gaps = 35/225 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  ++    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 98  LTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQ 157

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM---------KIV 322
                 S    + + +   T+ +PI+GTI+  +        +  +P++         +++
Sbjct: 158 NLELIRSGEASIGQAKLSSTLYAPISGTILNIK-------VEVGEPIISTESSQAATEMI 210

Query: 323 PHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + +     +  V+      +  G  A++    Y    E+     + K+  I S++ NN
Sbjct: 211 QLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP---EQVINGQLTKV-AIQSERLNN 266

Query: 381 LQ---TQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +    + +   ++V +   D+     N+ LR+GF A    T + 
Sbjct: 267 PENKDGKSFDNGFQVEIGQLDI---PENMTLRSGFSASAKITLQR 308


>gi|70731944|ref|YP_261686.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
 gi|68346243|gb|AAY93849.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
          Length = 288

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 76/223 (34%), Gaps = 28/223 (12%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN------ 269
           L   +R  +++ LE  + + + +     + E   EA+   A   + IS +L +N      
Sbjct: 71  LLSIDRDRFEAALEKAQAVVQTRQQQLSLRE--HEASRRAALGPQAISAELRENAQINAG 128

Query: 270 --QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +       ++  + E    +  + +P  G I   +  +  NY    QP+M ++     
Sbjct: 129 IARGELRQAQAEAKVAELNLARSQVHAPRDGHITNLRL-AEGNYVNAGQPVMALI-DDST 186

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
            Y++A     ++  ++ G    V      D      +  +E I   I+ ++     Q   
Sbjct: 187 FYVQAYFEETKLPRIQVGDPVKVWLMSAGD----ALQGHVESISRGITDRNATPDGQLLA 242

Query: 388 EV-----------ILKIT-DLAFSDNNIELRNGFPAEVLFTAK 418
           EV            + +   L      I L  G  A V     
Sbjct: 243 EVEPTFNWVRLAQRIPVRIKLDKVPEGINLSAGMTASVQVEEG 285



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 48/140 (34%), Gaps = 6/140 (4%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID------LKKVSIKNLRC 108
           +VV +    SG +++ +V +   +  G  LL+ +       ++        +    +LR 
Sbjct: 42  DVVIVAPDVSGWVRELKVADNQPVKAGELLLSIDRDRFEAALEKAQAVVQTRQQQLSLRE 101

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           H  + ++AL       ++ E A  +      +             N   S V+      +
Sbjct: 102 HEASRRAALGPQAISAELRENAQINAGIARGELRQAQAEAKVAELNLARSQVHAPRDGHI 161

Query: 169 TRMRSIYLNRLDLENKSSLL 188
           T +R    N ++       L
Sbjct: 162 TNLRLAEGNYVNAGQPVMAL 181


>gi|242309610|ref|ZP_04808765.1| macrolide-specific efflux protein macA [Helicobacter pullorum MIT
           98-5489]
 gi|239523611|gb|EEQ63477.1| macrolide-specific efflux protein macA [Helicobacter pullorum MIT
           98-5489]
          Length = 433

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 85/253 (33%), Gaps = 43/253 (16%)

Query: 197 KDLTMMKNLFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + L  + +  +K  + ++ D    E+ +Y+   +L     + K+    ++E   +     
Sbjct: 88  EVLVDVNDEVKKGQILARIDPESIEQDLYRYQAQLESAKAQLKSAEVSLDEKEWQYKQYQ 147

Query: 256 ANYLK-------------------EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
             Y K                   +   ++E  + +  +  + +   E   +   I SPI
Sbjct: 148 DLYQKTNGKTPSILELETAKTAYNDALSNVEIRKASIKEIETSIRSTEVDLKNSKITSPI 207

Query: 297 AGTIVYNQSFSSSNYAQQS--QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFP 353
            G ++  +S         S   P   IV  S +   + A ++   I  VK G        
Sbjct: 208 DGVVLQ-RSIEVGQSVAASFQAPEFFIVAESLEEMELNASISEADIGKVKVGQKVEFSVD 266

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----------YYEVILKITDLAFSDNN 402
            Y     K FKA +++++   S   ++  +              YE  + +      + +
Sbjct: 267 SYP---TKIFKAAVDRVNYGSSNASSSSSSSSSSTTTTLSEIVSYEARIYVD-----NKD 318

Query: 403 IELRNGFPAEVLF 415
           + LR G  A    
Sbjct: 319 LLLRPGMSATADI 331



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 82/232 (35%), Gaps = 21/232 (9%)

Query: 17  LKRMTLLSIIGIIGLITW-------------SILLPIEISVSSSGEILNEDNVVEIKSPF 63
              +  + ++ + G+  W             + +  I  ++S++G +    N V I +  
Sbjct: 24  WGMVCAIFVVIVGGIYWWNNRKPDITYETQKAFMGDISSTISANGTLSP-TNEVSIGTVI 82

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGI+ +  V+   ++ +G  L   +       +   +  +++ +  + + + +LD    +
Sbjct: 83  SGIVLEVLVDVNDEVKKGQILARIDPESIEQDLYRYQAQLESAKAQLKSAEVSLDEKEWQ 142

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   +  ++    +    L     T    +N  +S+V            SI    +DL+N
Sbjct: 143 YKQYQDLYQKTNGKTPSILE--LETAKTAYNDALSNVEIRKASIKEIETSIRSTEVDLKN 200

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-----NDLNQQERIVYKSTLEL 230
                       Q+ + + +++       +       L + E     S  ++
Sbjct: 201 SKITSPIDGVVLQRSIEVGQSVAASFQAPEFFIVAESLEEMELNASISEADI 252


>gi|213584343|ref|ZP_03366169.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 365

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 74  QAFERAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 133

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 134 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 186

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 187 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 233

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   T+    Y D    K+   +  +D          P  +   N ++  
Sbjct: 234 KETQLANMRIGQPVTIITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 291

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 292 QRLPVRVELDARQLEQHPLRI 312



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 32  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFERAKTALASSVRQTH 91

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 92  QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 151

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 152 AIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERT 191


>gi|146329791|ref|YP_001209768.1| macrolide-specific ABC-type efflux protein [Dichelobacter nodosus
           VCS1703A]
 gi|146233261|gb|ABQ14239.1| macrolide-specific ABC-type efflux protein [Dichelobacter nodosus
           VCS1703A]
          Length = 394

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 85/243 (34%), Gaps = 33/243 (13%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             V + D   QE +   +T +L+    E  +   H+ +           +  +    +E 
Sbjct: 95  QIVVEIDAKNQENMRKTATAQLQRQKAELASAKAHLQQAQKNEQRSRKLFQNQAGSKIEY 154

Query: 269 NQRTFADEMSK----------------LTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            Q T A  +++                + + +       I +PI+GT++           
Sbjct: 155 EQNTTALTVAENNVRAAEAAIRQSELTIELADVQLSDTKIRAPISGTVIAIAV-EEGQTV 213

Query: 313 QQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +Q  PL+  +  +    ++A++    I  ++ G  A +        + + ++A +  I
Sbjct: 214 NAAQSSPLLITLAQTNTMIVKAEIAEADIGDIRAGLPAKIHLLG---KKAQSYQAPLNHI 270

Query: 371 D--PIISQQDNNLQTQE--YYEVILKITDLAFSDNNIELRNGFPAEVLFTAK--NTTLAQ 424
           D  PI   Q       E  YY   +K+ +        +LR G  A++    +    TL  
Sbjct: 271 DPAPISVSQHGAFARNEAVYYYADIKLPNPE-----NKLRYGMTAKIAIEVERAEKTLLV 325

Query: 425 EII 427
            + 
Sbjct: 326 PLT 328



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/221 (9%), Positives = 79/221 (35%), Gaps = 9/221 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   ++++G +  E  +V++ +  SG I +  V+ G  +  G  ++  +     ++    
Sbjct: 54  ISYQINATGIVYPE-KIVDVGAQVSGKIARLHVKIGDTVSAGQIVVEIDAKNQENMRKTA 112

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              ++  +  + + K+ L           K F+++    +++  + ++T   V    + +
Sbjct: 113 TAQLQRQKAELASAKAHLQQAQKNEQRSRKLFQNQAGSKIEY--EQNTTALTVAENNVRA 170

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
              +++     +    +   D + ++ +   +++   ++   +      NA   + L   
Sbjct: 171 AEAAIRQSELTIELADVQLSDTKIRAPISGTVIAIAVEEGQTV------NAAQSSPLLIT 224

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
                   ++      +  ++   +         +  +Y  
Sbjct: 225 LAQTNTMIVKAEIAEADIGDIRAGLPAKIHLLGKKAQSYQA 265


>gi|22535378|gb|AAM97296.1| FeeC [uncultured bacterium]
          Length = 519

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 52/396 (13%), Positives = 116/396 (29%), Gaps = 54/396 (13%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-----LD 118
           SGII    V  G  +  GT L++ +     D +   + +       +   +       + 
Sbjct: 68  SGIIDSVPVTVGQLVSTGTILMSLQSKTFKDRLSQARAAHNAQLATLQHIQDGTRPEQIA 127

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               +    E A E+    LL  LG   S       + I + + +  ++   + ++  + 
Sbjct: 128 VSEAQLVAAETARENARHGLLAALGSAQSASDIAVRFTIDNQFITNPIQYNSVLTLTTSD 187

Query: 179 LDLENKSSLLRAL----LSSHQKDLTMMKN-----LFEKNAVSQNDLNQQERIVYKSTLE 229
             LE     +R      L+S  K + ++++     L          L    RI+   T  
Sbjct: 188 SLLEADILSIRRQIQPSLASWSKRMLVLQSADVDTLLAAGVDMHAYLQHIARILDGLTQI 247

Query: 230 L-----------RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ---------- 268
           L              +   +  +   +     A  +  N    ++    Q          
Sbjct: 248 LTLNNATEFSSTEVAVASARATISSTDVALTAARGDLQNAQNAVTIQDRQLGLEKAGPTS 307

Query: 269 -----NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
                 Q   A   + +  L    + +++ +P  G +           A      + ++ 
Sbjct: 308 AIALAQQAVVAGAQAYVAELHDELDDQSVAAPFTGIVTNI-VAKRGEAAVAGTVAVSMI- 365

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 +   V     + +  G    +    +     + F   +  IDP  + +D     
Sbjct: 366 SRGALKVEGYVPEVHYREITVGDPVRIELDAFP---GQSFSGTLGLIDPAATLRDGVPN- 421

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              ++V +      F + +  +R G  A       +
Sbjct: 422 ---FKVTV-----YFINPDPRIRPGLTASGSIETAD 449


>gi|332090171|gb|EGI95270.1| multidrug resistance protein K [Shigella dysenteriae 155-74]
          Length = 346

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 52  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 111

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 112 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 153

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 154 AADATKEAWLALKRTDIRSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 211

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 212 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 269

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 270 RVPVEVSLDPKELMEHPLRIGLSMTATID 298


>gi|114776426|ref|ZP_01451471.1| Secretion protein HlyD [Mariprofundus ferrooxydans PV-1]
 gi|114553256|gb|EAU55654.1| Secretion protein HlyD [Mariprofundus ferrooxydans PV-1]
          Length = 353

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 98/274 (35%), Gaps = 23/274 (8%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              +++    + ++  S   +L   +++ + RL   ++   +R   +         ++  
Sbjct: 76  QLLAELETQRLQALADSAAARLEAQQAV-VARLQAGSRPEDIRKARADLAATEVQARD-- 132

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
                ++    +  ++  ++ +   ++ +           +     L           D+
Sbjct: 133 -----AERTYLRLRKLSDRNMVSKEQSDNAATAAAAARERVKASTQLLQLAIQGPRQEDI 187

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           +  +     E ++L +      + ++ +PI G I  N+     + A   QPL  +   + 
Sbjct: 188 DAARAQLKAEQAQLALARHNLGEASLYAPIDGII-RNRVLEPGDMATPQQPLYTLA-ITN 245

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE- 385
             ++RA ++   +  V  G  A V    +     + +   +  I P       ++QT+E 
Sbjct: 246 PMWVRAYLSETDLGRVSSGMQAQVESDSFPGKHYRAW---VGYISPSAEFTPQSVQTEEI 302

Query: 386 ----YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                Y+V + +      + + ELR G P  VL 
Sbjct: 303 RSHLVYQVRVHVC-----NPDGELRLGMPVTVLL 331



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 45/146 (30%), Gaps = 8/146 (5%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNN 122
            I +  V+ G  + +G  L   E      L D     ++  +     +       D    
Sbjct: 60  RIARMLVQEGDHVHKGQLLAELETQRLQALADSAAARLEAQQAVVARLQAGSRPEDIRKA 119

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS-----IYLN 177
           + D+     ++R+ +      +  S  + V      +   +      R+++         
Sbjct: 120 RADLAATEVQARDAERTYLRLRKLSDRNMVSKEQSDNAATAAAAARERVKASTQLLQLAI 179

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMK 203
           +   +      RA L + Q  L + +
Sbjct: 180 QGPRQEDIDAARAQLKAEQAQLALAR 205


>gi|56751949|ref|YP_172650.1| hypothetical protein syc1940_d [Synechococcus elongatus PCC 6301]
 gi|56686908|dbj|BAD80130.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 419

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 50/362 (13%), Positives = 111/362 (30%), Gaps = 54/362 (14%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R      +    + +I +   I W     +   V   G I     V+++ +P  G+ + 
Sbjct: 22  RRTFFRYARIALGVGLISLAAYILWLRNSSVSSRV---GYI--NGTVIKLYAPIPGVAQL 76

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E G  + +G  L    +    +L   ++  +  L    + E++A D      + +  
Sbjct: 77  KPLEPGQALQKGQVLGEITNDRNPELETDRQNLVTRL-AQAEAERAAFDAQIASREQVRS 135

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              S+         ++    S      +     S                          
Sbjct: 136 QILSKANNQQQLEEQFFQQGSDRTRNELRQAQES-------------------------- 169

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L+  + +    ++L E  AVSQ   +       ++   +    +E +     +  +  
Sbjct: 170 --LAFAEIEAKRYQSLVESGAVSQQLADAALSQAREARAVVAAKQNELQRQRASLLAIRQ 227

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-----------------I 292
              L+ A  L      L   ++   D   K   +  T ++                   I
Sbjct: 228 GLQLDSARTLSIPELRLLDLEKELVDLTLKRQTVNTTIQEIRLEIINIQEQIKLQKKALI 287

Query: 293 LSPIAGTIVYNQSFS--SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            +PI G +    + +           PL+++V      +I A V+ +    ++ G  A +
Sbjct: 288 KAPIQGVVWSIINRTGLLGIPLTAGDPLLEMVTCEDT-WITALVSERDRNRLRVGQQADI 346

Query: 351 RF 352
           R 
Sbjct: 347 RL 348


>gi|16761595|ref|NP_457212.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29143075|ref|NP_806417.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213163676|ref|ZP_03349386.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213428731|ref|ZP_03361481.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213650058|ref|ZP_03380111.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|213850378|ref|ZP_03381276.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289811222|ref|ZP_06541851.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
 gi|289824475|ref|ZP_06544051.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25323910|pir||AF0842 multidrug resistance protein A [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16503896|emb|CAD05925.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138708|gb|AAO70277.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 390

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 99  QAFERAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 159 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 211

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 212 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   T+    Y D    K+   +  +D          P  +   N ++  
Sbjct: 259 KETQLANMRIGQPVTIITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 316

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 317 QRLPVRVELDARQLEQHPLRI 337



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFERAKTALASSVRQTH 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 117 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 176

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 177 AIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERT 216


>gi|330901669|gb|EGH33088.1| secretion protein HlyD [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 402

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 73/204 (35%), Gaps = 20/204 (9%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   ++ + +  RA + + Q +    ++L    A+SQ
Sbjct: 101 EVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRAAVQTAQDNYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +   L    +  +  L     L D+  +     +K  +  L Q     
Sbjct: 161 EELSHARDSLTSAQNAL----NNIQQQLSTSVALVDDTVVSSHPDVKAAAAQLRQAYLAN 216

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A              + T+++P+ G +   ++       Q     M ++P     +I A 
Sbjct: 217 A--------------RSTLVAPVTGYVAK-RTVQLGQRIQPGTATMAVIPLD-QLWIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD 357
               Q+  ++ G    +    Y  
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGS 284



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 64/184 (34%), Gaps = 9/184 (4%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            ++       + L  ++ I+ L  W+           + +     NVVEI    +G +  
Sbjct: 18  PKSGKRKFMLIGLAIVVVILALGIWAWYEIYGQWSEETDDAYVNGNVVEITPLVTGTVIS 77

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
              ++G  +  G  LL F+  +        +VS+++   ++      +  L +  D ++ 
Sbjct: 78  IGADDGDLVHAGQVLLKFDPSDA-------EVSLQSAEANLGKVVRQVRGLYSNVDGMKA 130

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              ++   +      Y+    +    G +     L      + S      +++ + S   
Sbjct: 131 QLAAQRAAVQTAQDNYN--RRRSLAAGGAISQEELSHARDSLTSAQNALNNIQQQLSTSV 188

Query: 190 ALLS 193
           AL+ 
Sbjct: 189 ALVD 192


>gi|327538350|gb|EGF25023.1| secretion protein HlyD family protein [Rhodopirellula baltica WH47]
          Length = 374

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 49/347 (14%), Positives = 114/347 (32%), Gaps = 41/347 (11%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K  V  G  +  G  L + +D+    +  L++ S +     I  +      L+   
Sbjct: 56  GRLVKIHVTEGDAVDLGELLASLDDV----VASLQQQSAEQDLAIIQFQSDQTLDLDAAL 111

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             LE+   + +E       +     + +            K + TR  +   N  D  ++
Sbjct: 112 AFLEEQKSAAKEHDAGAAIQKRLAENDIRVQAAQKAEAVAKSEWTRAVNAKKNFDDAVSQ 171

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           S + +  L+  Q+ L   + +FE+                 + LE   +     ++   I
Sbjct: 172 SEIDQFRLAYEQRSLETQQAIFEQ---------------ENARLEQSVDRATAASLQTKI 216

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                    + A    + + ++ Q ++   ++  +L +     EQ ++ SPI G +V   
Sbjct: 217 RSA------DVAVRQAKAAANIVQLKKKLKEQ--QLELARVNVEQHSLKSPIDGIVVEV- 267

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           S    ++    + + ++V       +   +  K I  ++      +     A     +  
Sbjct: 268 SHRVGDWVHPGESIARVV-RLDRLRVEGYLPAKWIHWLRDESEPKL-IVELATGETTERT 325

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              + I P +       +             +   + + +L  G PA
Sbjct: 326 GEAKFISPEVDPLTRETRFW-----------IEIDNADGKLLPGSPA 361


>gi|209548437|ref|YP_002280354.1| secretion protein HlyD [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209534193|gb|ACI54128.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 396

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 93/286 (32%), Gaps = 28/286 (9%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + F   +S    ++K     + +I       ++     +A + + Q  L          A
Sbjct: 119 RDFQAALSQARAAVKAADAAIANIDAQIALQQSVIGQAKATIDASQASLDF--------A 170

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VS    + +       T    E     ++      E    A +   N +  +    +Q  
Sbjct: 171 VSDAARSARLITSGAGTQSRAEQSQSARDQAAAAVERDRAALVAAENKVPVLETQRQQAI 230

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  +     E       I++ + GT+   +S     Y      LM +VP   +  +
Sbjct: 231 AERDRAAAAAQQAELNLSYTDIVAAVDGTV-GARSIRVGQYVTSGTQLMAVVPLHAVYVV 289

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEY 386
            A     Q+ HV+ G    ++   + D+     K  ++ + P    +      +  T  +
Sbjct: 290 -ANFKETQLTHVRPGQPVEIKVDSFPDM---AIKGHVDSVSPASGLEFSLLPPDNATGNF 345

Query: 387 YE------VILKITDLAFSDNNIELRNGFPAEVLFTAK--NTTLAQ 424
            +      V + I D A S     LR+G   E     K   T++A+
Sbjct: 346 TKIVQRIPVKIVIDDEALSG---LLRSGMSVEPEIDTKAAETSVAE 388



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 43/123 (34%), Gaps = 1/123 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I++  V +   +  G  L   +D +    +   + ++K     I    + +    +  
Sbjct: 94  GYIRQVLVNDNDPVKSGQVLARIDDRDFQAALSQARAAVKAADAAIANIDAQIALQQSVI 153

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   ++ +  L DF     +  +++   G  +  R+ + +  R ++      D    
Sbjct: 154 GQAKATIDASQASL-DFAVSDAARSARLITSGAGTQSRAEQSQSARDQAAAAVERDRAAL 212

Query: 185 SSL 187
            + 
Sbjct: 213 VAA 215


>gi|170682886|ref|YP_001744561.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli SMS-3-5]
 gi|170520604|gb|ACB18782.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli SMS-3-5]
          Length = 387

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 83/232 (35%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K   LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSDRKKYFALLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|320107014|ref|YP_004182604.1| RND family efflux transporter MFP subunit [Terriglobus saanensis
           SP1PR4]
 gi|319925535|gb|ADV82610.1| efflux transporter, RND family, MFP subunit [Terriglobus saanensis
           SP1PR4]
          Length = 400

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 56/290 (19%), Positives = 103/290 (35%), Gaps = 36/290 (12%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E+L   + +       +       +   ++    ++     N    +   +L R  +++ 
Sbjct: 77  EKLSTDINQTVHRGQILAQLDEVEIQAQVEAARAQLAGAESNERSCQAAITLDR--VNAE 134

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             DL M+K+ +E+ A    D     +++  S  +    I+ +   L  I    DEA    
Sbjct: 135 SPDLPMIKHTYERTAAMSRDGVMSAQMLDDSHQKYVIAINTRDRALAQIT--VDEAK--- 189

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI------VYNQSFSSS 309
                     L+Q Q   A   + L  LE+     TI SP+ G +      V N   S  
Sbjct: 190 ----------LKQAQSQVAQSRASLRQLEEQLSYTTITSPMDGVVLSRDVEVGNAVSSIL 239

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                +  +M +       Y++ KV    I H+  G  A +R   + D   K F   + K
Sbjct: 240 VMGSTATLVMTLG-DISQVYVQGKVDESDIGHIYLGQAARIRVESFKD---KTFNGKVTK 295

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           I P+  ++DN       +EV + I      +   +L+    A      + 
Sbjct: 296 IAPLGIEKDNVTT----FEVRVSID-----NPGGDLKANMTANAEVLLEE 336



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 71/197 (36%), Gaps = 17/197 (8%)

Query: 20  MTLLSIIGIIGLITWSILLPIEIS-------------VSSSGEILNEDNVVEIKSPFSGI 66
           + ++  +G+ G  T      I+ +             V ++G++     V E+KS  SGI
Sbjct: 17  IAVVGTLGVFGYRTAMEPAKIDAAQIATVDRGDIARSVVATGKVQPITKV-EVKSKASGI 75

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++K   +    + +G  L   +++E    ++  +  +     +  + ++A+       + 
Sbjct: 76  VEKLSTDINQTVHRGQILAQLDEVEIQAQVEAARAQLAGAESNERSCQAAITLDRVNAES 135

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISS---VYRSLKMKLTRMRSIYLNRLDLEN 183
            +        +    + +     +++ +           +    L ++          ++
Sbjct: 136 PDLPMIKHTYERTAAMSRDGVMSAQMLDDSHQKYVIAINTRDRALAQITVDEAKLKQAQS 195

Query: 184 KSSLLRALLSSHQKDLT 200
           + +  RA L   ++ L+
Sbjct: 196 QVAQSRASLRQLEEQLS 212


>gi|330963336|gb|EGH63596.1| multidrug resistance protein [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 402

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 88/259 (33%), Gaps = 32/259 (12%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + S   +L   + ++R +Y N   ++ + +  R  + + Q +    ++L    A+SQ +L
Sbjct: 104 LQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRTAVQTAQDNYNRRRSLAAGGAISQEEL 163

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           +     +  +    +  ++  +  L     L D+  +     +K  +  L Q     A  
Sbjct: 164 SHARDSLTSA----QSALNNIQQQLSTSVALVDDTVVSSHPDVKAAAAQLRQAFLANA-- 217

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                       + T+++P+ G +   +S       Q     M ++P     +I A    
Sbjct: 218 ------------RSTLVAPVTGYVAK-RSVQLGQRIQPGTATMAVIPLD-QLWIDANFKE 263

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----------EY 386
            Q+  ++ G    +    Y      K+   I+ +          L  Q          + 
Sbjct: 264 TQLGKMRIGQPVEISSDLYGSDV--KYSGTIDSLGAGTGSAFALLPAQNATGNWIKIVQR 321

Query: 387 YEVILKITDLAFSDNNIEL 405
             V + I     + + + +
Sbjct: 322 VPVRVHINPEELAQHPLRI 340



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 49/142 (34%), Gaps = 9/142 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVVEI    +G +     ++G  + +G  LL F+  +    +   + ++  +   + 
Sbjct: 60  VNGNVVEITPLVTGTVISIGADDGDLVHEGQVLLQFDPSDAAVSLQSAEANLGKVVRQVR 119

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              S +D +  +      A ++          + +    +    G +     L      +
Sbjct: 120 GLYSNVDGMKAQLAAQRTAVQT---------AQDNYNRRRSLAAGGAISQEELSHARDSL 170

Query: 172 RSIYLNRLDLENKSSLLRALLS 193
            S      +++ + S   AL+ 
Sbjct: 171 TSAQSALNNIQQQLSTSVALVD 192


>gi|66045210|ref|YP_235051.1| secretion protein HlyD [Pseudomonas syringae pv. syringae B728a]
 gi|63255917|gb|AAY37013.1| Secretion protein HlyD [Pseudomonas syringae pv. syringae B728a]
          Length = 390

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 17/182 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+       +  L +  +I +  W IL                IE SV++ G +    
Sbjct: 1   MKRSRHPRRALLVALCLFPVIAVCAWQILPDSKSSAATVTVTRGTIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  SG I K   + G Q+ +G  L+  +       +D  + +I NL+  +  ++
Sbjct: 61  YV-DVGSQASGQIMKIHAQVGDQVKEGDLLVEIDPSTQKAKLDAARYAIDNLKAQLQEQR 119

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +  +    K    ++       +  D       +  +     +      +      +RS 
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAA--ESEFRATQARVDMFKAQILEAQAALRSD 177

Query: 175 YL 176
             
Sbjct: 178 EA 179



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 10/212 (4%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIFAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWSSTVRQILPVPPRPLDQANQGGGSPSSARKNGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            V+L    L   +++  L     A++ F A  
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTAQIFFVADK 321


>gi|15598032|ref|NP_251526.1| secretion protein [Pseudomonas aeruginosa PAO1]
 gi|254235825|ref|ZP_04929148.1| hypothetical protein PACG_01766 [Pseudomonas aeruginosa C3719]
 gi|9948922|gb|AAG06224.1|AE004710_6 probable secretion protein [Pseudomonas aeruginosa PAO1]
 gi|126167756|gb|EAZ53267.1| hypothetical protein PACG_01766 [Pseudomonas aeruginosa C3719]
          Length = 354

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/368 (11%), Positives = 96/368 (26%), Gaps = 84/368 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++   VE+   +  G  L   +D +                       +  D L  + 
Sbjct: 56  GFVQDVLVEDNQPVKAGQLLARLDDRDF----------------RTALAAAEADVLGAEA 99

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++       + +Q L    +                                       K
Sbjct: 100 NLANAEANLQRQQALIEQAR--------------------------------------AK 121

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A L   + + +  + L  K A S  +  Q +  +  ++  L E         + +
Sbjct: 122 VRAEQAELVFARHEQSRYQTLASKGAGSLQNAQQAQSRIDTASARLAEGQAAVDATRKQV 181

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           + L                  + Q +       ++            + +P  G +   +
Sbjct: 182 SVLEAR---------------VGQARGDLQRMQARRDQARLDLSYCELRAPFDGQV-GRR 225

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y      L+ +VP  +   +       Q+ HV  G    +R   +     +  +
Sbjct: 226 QLRVGAYVTPGSALLAVVPLQQAYVV-GNFQETQLTHVSPGQAVEIRVDTFP---GEVLR 281

Query: 365 AIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLF- 415
             ++ I P      +    +  T  + +V+ +I      +       +LR G   E    
Sbjct: 282 GHVDSIAPATGLSFAPIAPDNATGNFTKVVQRIPVKIVLEPRQAMAGKLRVGMSVEARID 341

Query: 416 -TAKNTTL 422
                 + 
Sbjct: 342 TATGTRSA 349


>gi|323977444|gb|EGB72530.1| efflux pump membrane protein [Escherichia coli TW10509]
          Length = 387

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSDRRKYFSLLAVVLFIAFSGAYAYWSLELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNFVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|331653799|ref|ZP_08354800.1| multidrug resistance protein K [Escherichia coli M718]
 gi|331048648|gb|EGI20724.1| multidrug resistance protein K [Escherichia coli M718]
          Length = 387

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+I+  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAIVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|124003345|ref|ZP_01688195.1| secretion protein HlyD [Microscilla marina ATCC 23134]
 gi|123991443|gb|EAY30874.1| secretion protein HlyD [Microscilla marina ATCC 23134]
          Length = 439

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 83/276 (30%), Gaps = 42/276 (15%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +      ++  +L      + S   +    E      +A     + +    K L+E+  +
Sbjct: 77  LLKIRPDNLQAALDNSQAILNSRKASTAQAEAAYYQRKAEYGRLKLEFERSKKLYEQKVI 136

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S+ D    E     +  +L        +  ++I      A    AN  + +         
Sbjct: 137 SEADFQLAEANFNVAKQQL-------TSAKQNIEATKFNAQSAAANVTQNL--------- 180

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKL 327
                            + ++ SP+ GTI                     +++I   +  
Sbjct: 181 -------------DNLSRTSVFSPVNGTISKLNVEKGEKVVGTAQMAGTEMLRIANLNN- 226

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++  V    I  V+   TA +    Y     KKFK ++ +I    +   +     E+ 
Sbjct: 227 MEVQVDVNENDIVRVELKDTAVIEVDAYISQN-KKFKGVVTEIANTANPTTSPDAVTEF- 284

Query: 388 EVILKITDLAFSD------NNIELRNGFPAEVLFTA 417
           +V ++I   ++ D           R G  A V    
Sbjct: 285 KVKVRILQESYQDLLNKKRKMAPFRPGMTASVEIRT 320



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 6/144 (4%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
             VS+SG+I  E  V  I    SG I +  VE G  +++G  LL          +D  + 
Sbjct: 36  EQVSASGKIQPEIEVK-ISPDVSGEIMEVLVEEGDSVVKGQLLLKIRPDNLQAALDNSQA 94

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFES-----REEQLLDFLGKYHSTCSKVFNYG 156
            + + +      ++A      +Y  L+  FE       ++ + +   +       V    
Sbjct: 95  ILNSRKASTAQAEAAYYQRKAEYGRLKLEFERSKKLYEQKVISEADFQLAEANFNVAKQQ 154

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLD 180
           ++S  ++++      +S   N   
Sbjct: 155 LTSAKQNIEATKFNAQSAAANVTQ 178


>gi|16130300|ref|NP_416869.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89109188|ref|AP_002968.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli str. K-12 substr.
           W3110]
 gi|157161841|ref|YP_001459159.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli HS]
 gi|170019340|ref|YP_001724294.1| efflux pump membrane protein [Escherichia coli ATCC 8739]
 gi|170081984|ref|YP_001731304.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli str. K-12 substr.
           DH10B]
 gi|188495327|ref|ZP_03002597.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli 53638]
 gi|194436280|ref|ZP_03068382.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli 101-1]
 gi|218696010|ref|YP_002403677.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli 55989]
 gi|238901537|ref|YP_002927333.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli BW2952]
 gi|253772723|ref|YP_003035554.1| efflux pump membrane protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254162361|ref|YP_003045469.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli B str. REL606]
 gi|256021932|ref|ZP_05435797.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia sp. 4_1_40B]
 gi|301023644|ref|ZP_07187400.1| efflux pump membrane protein [Escherichia coli MS 196-1]
 gi|307139016|ref|ZP_07498372.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli H736]
 gi|331642994|ref|ZP_08344129.1| multidrug resistance protein K [Escherichia coli H736]
 gi|331663932|ref|ZP_08364842.1| multidrug resistance protein K [Escherichia coli TA143]
 gi|331673854|ref|ZP_08374617.1| multidrug resistance protein K [Escherichia coli TA280]
 gi|2506509|sp|P52599|EMRK_ECOLI RecName: Full=Multidrug resistance protein K
 gi|1788711|gb|AAC75427.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85675380|dbj|BAA16239.2| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli str. K12 substr.
           W3110]
 gi|157067521|gb|ABV06776.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli HS]
 gi|169754268|gb|ACA76967.1| efflux pump membrane protein [Escherichia coli ATCC 8739]
 gi|169889819|gb|ACB03526.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli str. K-12 substr.
           DH10B]
 gi|188490526|gb|EDU65629.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli 53638]
 gi|194425008|gb|EDX40993.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli 101-1]
 gi|218352742|emb|CAU98528.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli 55989]
 gi|238861026|gb|ACR63024.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli BW2952]
 gi|242377986|emb|CAQ32756.1| EmrK putative membrane fusion protein, subunit of EmrKY-TolC
           putative multidrug efflux transport system [Escherichia
           coli BL21(DE3)]
 gi|253323767|gb|ACT28369.1| efflux pump membrane protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974262|gb|ACT39933.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli B str. REL606]
 gi|253978429|gb|ACT44099.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli BL21(DE3)]
 gi|260448541|gb|ACX38963.1| efflux pump membrane protein [Escherichia coli DH1]
 gi|299880745|gb|EFI88956.1| efflux pump membrane protein [Escherichia coli MS 196-1]
 gi|309702662|emb|CBJ01991.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli ETEC H10407]
 gi|315137004|dbj|BAJ44163.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli DH1]
 gi|323961432|gb|EGB57043.1| efflux pump membrane protein [Escherichia coli H489]
 gi|323970932|gb|EGB66183.1| efflux pump membrane protein [Escherichia coli TA007]
 gi|331039792|gb|EGI12012.1| multidrug resistance protein K [Escherichia coli H736]
 gi|331059731|gb|EGI31708.1| multidrug resistance protein K [Escherichia coli TA143]
 gi|331069127|gb|EGI40519.1| multidrug resistance protein K [Escherichia coli TA280]
          Length = 387

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|330951642|gb|EGH51902.1| secretion protein HlyD [Pseudomonas syringae Cit 7]
          Length = 390

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+       +  L +  +I +  W IL                IE SV++ G +    
Sbjct: 1   MKRSRHPRSALLVALCLFPVIAVCAWQILPDGKSSAATVTVTRGTIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  SG I K   + G Q+ +G  L+  +       +D  + +I NL+  +  ++
Sbjct: 61  YV-DVGSQASGQIMKIHAQVGDQVKEGDLLVEIDPSTQKARLDAARYAIDNLKAQLQEQR 119

Query: 115 SALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    K      L     +R E +     ++ +T ++V  F   I     +L+    
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEAQAALRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 AL 181



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 70/217 (32%), Gaps = 20/217 (9%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIFAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--------- 385
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWSSTVRQILPVPPRPLDQANQGGGSPNSSRKNGGG 289

Query: 386 ---YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               Y V+L +      +++  L     A++ F A+ 
Sbjct: 290 RVVLYTVLLDVD-----NSDQALMAEMTAQIFFVAEK 321


>gi|256751138|ref|ZP_05492020.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256750044|gb|EEU63066.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 521

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 50/383 (13%), Positives = 122/383 (31%), Gaps = 36/383 (9%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I + V+ +G +    +V  I    SG +KK   + G  + +G  L   ED +  + ++
Sbjct: 42  GNISMEVTGTGNL--SGDVRAITLKGSGTVKKVYFKVGDTVKKGDLLYEIEDDDLNNQLE 99

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K+++   +  ++ EK   +    K  +   +    +  + +                 
Sbjct: 100 EAKLNLDLAQQQLNQEKQNYNNSLAKLSITAPSDGVVQVLVKEG------------QDVT 147

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
             +  ++    ++      N       S  + A ++   + + + +       V +  L 
Sbjct: 148 PGMPVAIIGDNSKENETAENNGQTTQNSVNVTAQIAGTVEKVYVSQG----QNVKKGQLL 203

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            +      S  +++    + K      N++  + +         I   +        D +
Sbjct: 204 IKLSSNNISDAQIKNAELKLKQAQNQYNQILQQIDN--LKIYSPIDGKILSQNINEGDIL 261

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
              ++           S  AG +        S Y  Q +  + IV  +    +   V   
Sbjct: 262 GT-SVASTNISNTNSQSQQAGFVPVLDITQLSTYESQPETAV-IV-GNSNYVVNLSVDET 318

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I+++K G  A +      ++  K F   + ++  + + Q+        Y V +++    
Sbjct: 319 DIKNIKVGQQAQL---TTDNLPGKTFTGTVSQVSQLPTIQNGVAS----YNVTIEVEPSE 371

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
                 +L  G    V  T    
Sbjct: 372 ------DLLLGMSMNVSITVAEK 388


>gi|168748321|ref|ZP_02773343.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4113]
 gi|168757411|ref|ZP_02782418.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4401]
 gi|168770936|ref|ZP_02795943.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4486]
 gi|168772799|ref|ZP_02797806.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4196]
 gi|168780328|ref|ZP_02805335.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4076]
 gi|168787281|ref|ZP_02812288.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC869]
 gi|168800703|ref|ZP_02825710.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC508]
 gi|195938721|ref|ZP_03084103.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli O157:H7 str. EC4024]
 gi|208806812|ref|ZP_03249149.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4206]
 gi|208814477|ref|ZP_03255806.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4045]
 gi|208820656|ref|ZP_03260976.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4042]
 gi|209397981|ref|YP_002271855.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4115]
 gi|254794330|ref|YP_003079167.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli O157:H7 str.
           TW14359]
 gi|261223182|ref|ZP_05937463.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261259268|ref|ZP_05951801.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli O157:H7 str.
           FRIK966]
 gi|187771239|gb|EDU35083.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4196]
 gi|188017360|gb|EDU55482.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4113]
 gi|189001884|gb|EDU70870.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4076]
 gi|189355569|gb|EDU73988.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4401]
 gi|189360241|gb|EDU78660.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4486]
 gi|189372896|gb|EDU91312.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC869]
 gi|189377032|gb|EDU95448.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC508]
 gi|208726613|gb|EDZ76214.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4206]
 gi|208735754|gb|EDZ84441.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4045]
 gi|208740779|gb|EDZ88461.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4042]
 gi|209159381|gb|ACI36814.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4115]
 gi|209764558|gb|ACI80591.1| multidrug resistance protein K [Escherichia coli]
 gi|209764562|gb|ACI80593.1| multidrug resistance protein K [Escherichia coli]
 gi|209764566|gb|ACI80595.1| multidrug resistance protein K [Escherichia coli]
 gi|254593730|gb|ACT73091.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli O157:H7 str.
           TW14359]
 gi|320192005|gb|EFW66650.1| Multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC1212]
 gi|320641020|gb|EFX10501.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli O157:H7 str. G5101]
 gi|320646408|gb|EFX15331.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli O157:H- str. 493-89]
 gi|320651677|gb|EFX20057.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli O157:H- str. H 2687]
 gi|320657258|gb|EFX25063.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320667708|gb|EFX34619.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli O157:H7 str. LSU-61]
 gi|326340177|gb|EGD63981.1| Multidrug resistance protein A [Escherichia coli O157:H7 str. 1125]
          Length = 387

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+I+  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAIVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|182416570|ref|ZP_02947992.1| putative HylD family protein [Clostridium butyricum 5521]
 gi|237667392|ref|ZP_04527376.1| secretion protein HlyD family protein [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182379567|gb|EDT77050.1| putative HylD family protein [Clostridium butyricum 5521]
 gi|237655740|gb|EEP53296.1| secretion protein HlyD family protein [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 497

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 49/378 (12%), Positives = 117/378 (30%), Gaps = 89/378 (23%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  VE G ++ +G  L   +     D I+ +++S+                       
Sbjct: 104 VQQINVEVGDEVKKGEVLAIIDTSTLEDDIEKQELSVSANEKKAQI-------------A 150

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           LE+A ++ E  +  +    ++T                   +    ++  N+L L+NK S
Sbjct: 151 LEQAKDTYENSVYLYENNLNTTL------------------VNAQAAVDQNKLSLDNKKS 192

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
               +    Q  L   +   +   +++ D    +    KS + L                
Sbjct: 193 ----IYEYKQMMLDNGEESSQNVNLAKIDYENAQSDYDKSQIALSA-------------- 234

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT--REQKTILSPIAGTIVYNQ 304
               A +     +++  +  E  Q    D  S+L + ++    + K +++ + G +    
Sbjct: 235 ----AKVSVEQEIEKNKKSYESAQAAVDDTSSRLALEKQKEKLKDKEVVATVDGIVTAVN 290

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +    +   + +  + ++       ++  V   +I +V  G    V          +  +
Sbjct: 291 A----SVGSKCEDSLFVIQDLNDLIVKVSVDETEIANVAVGQKVQVTTDA----STEILE 342

Query: 365 AIIEKIDPIISQQDNNLQTQEY-----------------------YEVILKITDLAFSDN 401
             +  +DPI S   +   T                          + V ++IT       
Sbjct: 343 GEVVTVDPISSAAASETSTSSSSSSSSKSSGTSSTSSNSTSSDVTFTVKVQITSEEIDKA 402

Query: 402 NIELRNGFPAEVLFTAKN 419
              ++ G  A V      
Sbjct: 403 ---VKVGMNAVVNIIIGE 417


>gi|146299432|ref|YP_001194023.1| RND family efflux transporter MFP subunit [Flavobacterium
           johnsoniae UW101]
 gi|146153850|gb|ABQ04704.1| efflux transporter, RND family, MFP subunit [Flavobacterium
           johnsoniae UW101]
          Length = 429

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 47/157 (29%), Gaps = 16/157 (10%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKL 327
                 + +T       + TI +P  GTI                     L++ V +   
Sbjct: 168 NVQSASASVTEARDNLGRTTIYAPADGTISVLNVELGERVLGTQQMAGTELLR-VANLNN 226

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +   V    I  +K G  A V    Y    +KKFK ++  I    S    + Q   + 
Sbjct: 227 MEVEVDVNENDIVKIKIGDEANVEVDAY---LKKKFKGVVTSISNSASTTLTSDQVTNF- 282

Query: 388 EVILKITD-------LAFSDNNIELRNGFPAEVLFTA 417
           +V ++I             D     R G  A V    
Sbjct: 283 KVKVRILKESYQDLLEGKPDAYSPFRPGMTATVDIIT 319



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 66/194 (34%), Gaps = 6/194 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++G+I  E  V  + S  SG I    V+ G  + +G  L+       T  ++  
Sbjct: 48  IVETVSATGKIQPEIEVK-LSSMVSGEIIALNVKEGQVVKKGDLLVKINPDLYTSGLERS 106

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             ++   +  +   +++       Y+  +  ++       D+      +  +V      +
Sbjct: 107 VANLSGTKAGLVQSEASFKEAKANYERNKTLYDKGVISKSDWDKAI--STYEVAKATKQN 164

Query: 160 VY---RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            Y   +S    +T  R               +  L     + +   + +     +   +L
Sbjct: 165 AYYNVQSASASVTEARDNLGRTTIYAPADGTISVLNVELGERVLGTQQMAGTELLRVANL 224

Query: 217 NQQERIVYKSTLEL 230
           N  E  V  +  ++
Sbjct: 225 NNMEVEVDVNENDI 238


>gi|15802911|ref|NP_288938.1| multidrug resistance protein K [Escherichia coli O157:H7 EDL933]
 gi|15832501|ref|NP_311274.1| multidrug resistance protein K [Escherichia coli O157:H7 str.
           Sakai]
 gi|168763543|ref|ZP_02788550.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4501]
 gi|217326976|ref|ZP_03443059.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. TW14588]
 gi|12516738|gb|AAG57493.1|AE005468_2 multidrug resistance protein K [Escherichia coli O157:H7 str.
           EDL933]
 gi|13362717|dbj|BAB36670.1| multidrug resistance protein K [Escherichia coli O157:H7 str.
           Sakai]
 gi|189366310|gb|EDU84726.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. EC4501]
 gi|209764560|gb|ACI80592.1| multidrug resistance protein K [Escherichia coli]
 gi|217319343|gb|EEC27768.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O157:H7 str. TW14588]
 gi|326344181|gb|EGD67942.1| Multidrug resistance protein A [Escherichia coli O157:H7 str. 1044]
          Length = 387

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 83/232 (35%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL I+  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLVIVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|260429663|ref|ZP_05783639.1| secretion protein HlyD family protein [Citreicella sp. SE45]
 gi|260419146|gb|EEX12400.1| secretion protein HlyD family protein [Citreicella sp. SE45]
          Length = 346

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 99/324 (30%), Gaps = 33/324 (10%)

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S   +R  + T  +       +  V + A  ++ E L+    +            +
Sbjct: 37  EVRTSNAYVRGQVTTLSAQGAGEVTEVPVSDFATVAKGEVLVQLDDRSARQALAQAEAQL 96

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +S   +L+     +RS        E  +   +A L + Q   T +  L EK  VS +D+ 
Sbjct: 97  ASARSALEANTQSIRSAEATLESREASARAAKAALDTTQASWTRLHKLQEKGVVSTSDVE 156

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             +  + ++   L E           +     + +                     +   
Sbjct: 157 DADLALRQAEAALTEASSNTDVAREAVASAKVQTDT---------------LNAQISSAE 201

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + + +     E + I +P  G +          Y      L+ +VP     ++ A V   
Sbjct: 202 AAVALARIDLEHRVIRAPSDGRLGQIGVR-VGQYVTAGTSLVSLVPP--QVWVIANVKET 258

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE----- 388
           +   +++G   +       D     F   I +  P  + +     N+  T  + +     
Sbjct: 259 EFADLRQGQRVSFTVDALHDR---AFGGHITQFSPATASEYSVLGNSTATGNFTKIAQRL 315

Query: 389 -VILKITDLAFSDNNIELRNGFPA 411
            V ++I        + EL  G   
Sbjct: 316 PVRIEIDPD--QPGSTELAPGMSV 337



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 95/267 (35%), Gaps = 10/267 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
            H      + LL ++GI GL+ W+  L P + +   +        V  + +  +G + + 
Sbjct: 5   KHHVPTFLIVLLGVLGI-GLVLWAWHLPPFDGAEVRTSNAYVRGQVTTLSAQGAGEVTEV 63

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V + + + +G  L+  +D      +   +  + + R  ++    ++       +  E +
Sbjct: 64  PVSDFATVAKGEVLVQLDDRSARQALAQAEAQLASARSALEANTQSIRSAEATLESREAS 123

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             + +  L D      +   K+   G+ S        L  +R       +  + + + R 
Sbjct: 124 ARAAKAAL-DTTQASWTRLHKLQEKGVVSTSDVEDADLA-LRQAEAALTEASSNTDVARE 181

Query: 191 LLSSH--QKDLTMMKNLFEKNAVSQNDLNQQERIVYK----STLELRENIHEQKNMLRHI 244
            ++S   Q D    +    + AV+   ++ + R++         ++   + +       +
Sbjct: 182 AVASAKVQTDTLNAQISSAEAAVALARIDLEHRVIRAPSDGRLGQIGVRVGQYVTAGTSL 241

Query: 245 NELYDEANLEFANYLKEISRDLEQNQR 271
             L        AN  +    DL Q QR
Sbjct: 242 VSLVPPQVWVIANVKETEFADLRQGQR 268


>gi|182415747|ref|YP_001820813.1| RND family efflux transporter MFP subunit [Opitutus terrae PB90-1]
 gi|177842961|gb|ACB77213.1| efflux transporter, RND family, MFP subunit [Opitutus terrae
           PB90-1]
          Length = 367

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 85/244 (34%), Gaps = 22/244 (9%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L+ +       L +   +L + +   E +  ++    +         +  RENI   + 
Sbjct: 70  GLKVRQGDFLVQLDTGDLELEIER--IESDYAARKKSLEIGSSTRLDLVTARENIAHLER 127

Query: 240 MLRHINELYDEANLEFANYLK-EISRDLEQ--NQRTFADEMSKLTILEKTREQKTILSPI 296
           M+   N    E   +       E    LE+  N+   A   + L    +  E+ TI++P 
Sbjct: 128 MVESGNYPVAELEKQRRGLKAIEQKLALEEVGNEHELATFENTLKAKRRELEKMTIVAPF 187

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   ++    +      P+  ++  ++   +  +++ +    V++G  A VRF  Y 
Sbjct: 188 DGVVAEVRAR-PGDLIGGGAPIAILISTTRT--VEGRISEENFAGVREGQDAQVRFLGYG 244

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           + + +   A + KI P             Y EV ++           +L  G   E+   
Sbjct: 245 EQQYR---AKVTKILPTADPATQRYIV--YLEVQIEPE---------KLVPGLTGELTIV 290

Query: 417 AKNT 420
               
Sbjct: 291 VGER 294



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 81/233 (34%), Gaps = 28/233 (12%)

Query: 23  LSIIGIIGLITWSILLPIEISVS------SSGEILNEDNVV-EIKSPFSGIIKKFQVENG 75
           L ++G+   +       +  +V         G ++       E+KS   G + K +++ G
Sbjct: 11  LVVLGVALSLYLRPTAQVSAAVKDRAVNLVPGSVIVRAEYQMELKSEIGGRVIKSELDPG 70

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID-TEKSALDFLNNKYDVLEKAFESR 134
            ++ QG  L+  +  +    I+  +      +  ++    + LD +  + ++        
Sbjct: 71  LKVRQGDFLVQLDTGDLELEIERIESDYAARKKSLEIGSSTRLDLVTARENI-------- 122

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                     +     +  NY ++ + +  +      + + L  +  E++ +     L +
Sbjct: 123 ---------AHLERMVESGNYPVAELEKQRRGLKAIEQKLALEEVGNEHELATFENTLKA 173

Query: 195 HQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +++L  M  +      V++     +   +      +   I   + +   I+E
Sbjct: 174 KRRELEKMTIVAPFDGVVAEVR--ARPGDLIGGGAPIAILISTTRTVEGRISE 224


>gi|188586692|ref|YP_001918237.1| efflux transporter, RND family, MFP subunit [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179351379|gb|ACB85649.1| efflux transporter, RND family, MFP subunit [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 416

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 67/400 (16%), Positives = 150/400 (37%), Gaps = 61/400 (15%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
              + G++ L+  +      I+V ++G I    NV EI       IK    E G      
Sbjct: 5   WKILFGVLILVAAASF----ITVQATGSITV--NVKEISPEE---IKHSFTEEG------ 49

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
               T E  E  ++I +    I                  +K  V +     + E L++ 
Sbjct: 50  ----TVEPAEDRNVITMHTAKI------------------DKVHVEDGDHVKQGELLVEL 87

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             +  +   +     + ++      +            ++E      +  L + +     
Sbjct: 88  NPRELNYTIEELRAQVRALEGER--QQLEQEPGEAEIENIEIGIEHAKDTLKNAETRYEK 145

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +K ++  +  ++++L + E +V ++ L    N+++QK  L  ++E +            E
Sbjct: 146 IKEMYRNDFATESELKEAEDMVKQAEL----NLNQQKKSLEILDESFSPP---------E 192

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            S ++   Q++  +  S++  L++ +E+  + +PI G +   Q       A   +PLMKI
Sbjct: 193 GSYEVIDAQKSALE--SQIEFLKEQKEEYQMHAPIQGIVTDLQVEEMG-LANPERPLMKI 249

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
              +    I  +V  + +  +++    ++ F      ++ +F   I +I P      + L
Sbjct: 250 R-GNDKLQIETRVLTRDVYEIEESMEVSLVFE--RREKDVEFTGEISEIAPYAEASLSEL 306

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             +   E  + +T       +I+L  G+  +V F  +  T
Sbjct: 307 GLE---EERVPVTITPEIPEDIDLGPGYKVDVEFITEKQT 343


>gi|294508010|ref|YP_003572068.1| Multidrug resistance protein [Salinibacter ruber M8]
 gi|294344338|emb|CBH25116.1| Multidrug resistance protein [Salinibacter ruber M8]
          Length = 378

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 68/211 (32%), Gaps = 9/211 (4%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           ++   + +R   ++ L       +             E +              E+ Q  
Sbjct: 109 RSQNVEAQREQVRARLREARAARDNAETQFERIRALREKDSATEQEFDNAQTAYERAQAQ 168

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                S+L   E      T+ +PI G +V  QS      A   +PL+  V          
Sbjct: 169 VEALESRLAETEDMLTYATLEAPIDGYVVEKQS-EQGALAAPGRPLLT-VETLDDLKAVV 226

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +V  + +     G +ATV     A++ E   + +I +++P  +        Q    V L 
Sbjct: 227 QVPAEDVNQFAVGDSATVTIGAAANVHE---QGVITQVNPSGNAVSRQFTVQ----VRLP 279

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            T     +    L++G  AEV       +  
Sbjct: 280 RTAPDDREAATALKSGMYAEVRHQTGTHSTL 310



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 54/150 (36%), Gaps = 7/150 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  VE G ++ +G  L+       +  ++ ++  ++         +   +    + 
Sbjct: 86  GTITRLSVEEGDRVQKGETLVRI----RSQNVEAQREQVRARLREARAARDNAETQFERI 141

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L +   + E++  +    Y    ++V    + S     +  LT   ++         +
Sbjct: 142 RALREKDSATEQEFDNAQTAYERAQAQV--EALESRLAETEDMLT-YATLEAPIDGYVVE 198

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +  L++  + L  ++ L +  AV Q 
Sbjct: 199 KQSEQGALAAPGRPLLTVETLDDLKAVVQV 228


>gi|288926171|ref|ZP_06420098.1| efflux transporter, RND family, MFP subunit [Prevotella buccae D17]
 gi|288337063|gb|EFC75422.1| efflux transporter, RND family, MFP subunit [Prevotella buccae D17]
          Length = 397

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 76/225 (33%), Gaps = 21/225 (9%)

Query: 204 NLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           ++ +K  V     + +L  Q      +    + N+  Q    +    LY +  +   ++ 
Sbjct: 82  SVVKKGQVIAELDKTNLLSQLHSAKATLSSNQSNLDYQTANYKRYQTLYKKGLVSADDFE 141

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---Q 316
              +    Q +   A    ++   +      TI SPI G ++  +S         S    
Sbjct: 142 S-AALSYRQAREQVASAQEEVQRAQTNLGYATITSPIDGVVLS-KSVEEGQTVAASFSTP 199

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  I        + A V    I  VK G   T     Y D     F+  ++++    + 
Sbjct: 200 ELFTIAQDLTNMQVVADVDEADIGDVKAGERVTFTVDAYPDDT---FQGTVKQVRQEATT 256

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +N +     YEV++        + +++L+ G  A V       +
Sbjct: 257 TNNVVT----YEVVISAP-----NADLKLKPGLTANVTILTSEKS 292



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 71/186 (38%), Gaps = 4/186 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ S++++G I    +V  + +  SGI+ K  V+  S + +G  +   +       +   
Sbjct: 47  LQSSITATGTIEPVTSV-TVGTQVSGIVSKLYVDYNSVVKKGQVIAELDKTNLLSQLHSA 105

Query: 100 KVSIKNLRCHIDTEKS---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           K ++ + + ++D + +       L  K  V    FES          +  S   +V    
Sbjct: 106 KATLSSNQSNLDYQTANYKRYQTLYKKGLVSADDFESAALSYRQAREQVASAQEEVQRAQ 165

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +  Y ++   +  +             +S     L +  +DLT M+ + + +     D+
Sbjct: 166 TNLGYATITSPIDGVVLSKSVEEGQTVAASFSTPELFTIAQDLTNMQVVADVDEADIGDV 225

Query: 217 NQQERI 222
              ER+
Sbjct: 226 KAGERV 231


>gi|256389444|ref|YP_003111008.1| secretion protein HlyD [Catenulispora acidiphila DSM 44928]
 gi|256355670|gb|ACU69167.1| secretion protein HlyD family protein [Catenulispora acidiphila DSM
           44928]
          Length = 536

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 85/271 (31%), Gaps = 34/271 (12%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS+SG +       ++    SG + +  V+ G  +  G  L   +  E    +   +  +
Sbjct: 58  VSASGNVTLPTE-QDLAFTASGTVTEVDVKPGDVVKAGQVLAKIDTTEANQQLTSAQAQL 116

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +   +                             +  +   +       S+  +
Sbjct: 117 TTAQAQLTKLQQG------------------------QTPQQAALSRQQLTNAADSLSSA 152

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                    SI L+  +L    +  +  L++   D    K    K A   N + Q E   
Sbjct: 153 KTSYSDARNSISLDESNLAAAVTTAKNNLAA---DEAAAKPDAAKIAQDTNAVTQAENAQ 209

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEA-NLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +L+  +++H+ +N L      Y  A + +  +        +    ++  +  + +T 
Sbjct: 210 KNGSLKDTQSLHQAQNSLTSAQNSYAIAVDQQAVSAAPATPDQIASANQSVLNAQNAVTT 269

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
            +K      I +P AGT++     S      
Sbjct: 270 AQKGVAGTVITAPQAGTVL-----SVGGLVG 295


>gi|227081718|ref|YP_002810269.1| hypothetical protein VCM66_1504 [Vibrio cholerae M66-2]
 gi|227009606|gb|ACP05818.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227013475|gb|ACP09685.1| conserved hypothetical protein [Vibrio cholerae O395]
          Length = 386

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +   
Sbjct: 52  IEKQAVAVGQIMPS-HSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDA 110

Query: 100 KVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              +     +++++   L  L    K  ++   ++       D   K      K  N  +
Sbjct: 111 STELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLEL 170

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMKNLFEK 208
                +   +     ++Y               E   S   +  ++    L  MKN+  K
Sbjct: 171 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFK 230

Query: 209 NAVSQNDLNQQERIVYKS 226
            +VS++D  Q    +  S
Sbjct: 231 GSVSEHDAAQLNAGMPAS 248



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 87/225 (38%), Gaps = 35/225 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  ++    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 107 LTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQ 166

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM---------KIV 322
                 S    + + +   T+ +PI+GTI+  +        +  +P++         +++
Sbjct: 167 NLELIRSGEASIGQAKLSSTLYAPISGTILNIK-------VEVGEPIISTESSQAATEMI 219

Query: 323 PHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + +     +  V+      +  G  A++    Y    E+     + K+  I S++ NN
Sbjct: 220 QLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP---EQVINGQLTKV-AIQSERLNN 275

Query: 381 LQ---TQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +    + +   ++V +   D+     N+ LR+GF A    T + 
Sbjct: 276 PENKDGKSFDNGFQVEIGQLDI---PENMTLRSGFSASAKITLQR 317


>gi|317970483|ref|ZP_07971873.1| membrane fusion protein [Synechococcus sp. CB0205]
          Length = 399

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 80/227 (35%), Gaps = 26/227 (11%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            A++  D    +  + + + +L+    +Q      +    +       +     S     
Sbjct: 120 QALALMDGGDLQDRLEELSAQLQSAKAQQARSQSELQRRENLVRNGAISQDNYNSAKAAY 179

Query: 269 --NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK------ 320
             ++        +L   E  R +  + +P AGTI   +      Y   +           
Sbjct: 180 LVDRAAVEAAQQRLEQREMERSELVVRAPFAGTITA-RFADPGAYVTPTTSASASAGASS 238

Query: 321 --IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             IV  ++     AKV    I  +K G T +VR   + D R   FKA + +I P  ++ +
Sbjct: 239 SSIVELAQGLEAVAKVPESDIGRIKLGQTGSVRVDAFQDRR---FKAQVRQIAPRAAKLN 295

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK---NTTL 422
           N       +EV LK  + A      ELR G  A++ F        TL
Sbjct: 296 NVTS----FEVTLKFVEPAP-----ELRIGMTADIDFNTGNLPPRTL 333



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 72/215 (33%), Gaps = 3/215 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   +++SGE+     +V +     G++K   VE G  +  G  L   +  +  D ++  
Sbjct: 79  LPGLITASGELEAF-RLVNVSPKRQGVLKTLYVEEGDSVKAGQALALMDGGDLQDRLEEL 137

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              +++ +      +S L    N       + ++       +L    +  +         
Sbjct: 138 SAQLQSAKAQQARSQSELQRRENLVRNGAISQDNYNSAKAAYLVDRAAVEAAQQRLEQRE 197

Query: 160 VYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLN 217
           + RS  +           R  D     +   +  +S     + +  L +   AV++   +
Sbjct: 198 MERSELVVRAPFAGTITARFADPGAYVTPTTSASASAGASSSSIVELAQGLEAVAKVPES 257

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              RI    T  +R +  + +     + ++   A 
Sbjct: 258 DIGRIKLGQTGSVRVDAFQDRRFKAQVRQIAPRAA 292


>gi|293410773|ref|ZP_06654349.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471241|gb|EFF13725.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 387

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|187733087|ref|YP_001881177.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Shigella boydii CDC 3083-94]
 gi|187430079|gb|ACD09353.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Shigella boydii CDC 3083-94]
          Length = 387

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 83/232 (35%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL ++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLVVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|19716261|gb|AAL95701.1|AF360362_3 TrpB [Pseudomonas putida]
          Length = 353

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 81/254 (31%), Gaps = 17/254 (6%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           + +    +  + L    +   +    +K    + A + +++N+  R+  +    ++ N  
Sbjct: 94  VAQAQSADARATLERQDALIAQAEAAVKAAQAEVAFADHEVNRYSRLAEQGAGTVQ-NAQ 152

Query: 236 EQKNMLRHINELYDEANLEFANYLKEI---SRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           + ++ +         A        K++      +           + L   +       I
Sbjct: 153 QARSAVDQARARLANAQAARVAARKQVDILKAQVASADGQLKRAEAGLEKAQLDLSYTRI 212

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P+ G +   ++     Y      L+ +VP  +   +       Q+ HV+ G    +  
Sbjct: 213 TAPVDGMV-GERALRVGAYVNPGARLLSVVPLQQAYVV-GNFQETQLTHVQPGQPVRISV 270

Query: 353 PHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNN----IE 404
             ++       +  ++ I P      +    +  T  + +V+ +I      D+       
Sbjct: 271 DTFSGET---LQGHVQSIAPATGVTFAAVKPDNATGNFTKVVQRIPVKIVLDDGQPLLTR 327

Query: 405 LRNGFPAEVLFTAK 418
           LR G   E     +
Sbjct: 328 LRVGMSVEATIDTR 341



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 47/162 (29%), Gaps = 5/162 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK-----VSIKNL 106
              +   +    +G IK+  VE+  Q+  G  L T +  +    +D  +        ++ 
Sbjct: 41  VSADYTVVAPKVAGFIKQVLVEDNQQVTAGQLLATIDARDYQAALDAAQAQLLVAQAQSA 100

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                 E+        +  V     E              +               ++  
Sbjct: 101 DARATLERQDALIAQAEAAVKAAQAEVAFADHEVNRYSRLAEQGAGTVQNAQQARSAVDQ 160

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              R+ +    R+    +  +L+A ++S    L   +   EK
Sbjct: 161 ARARLANAQAARVAARKQVDILKAQVASADGQLKRAEAGLEK 202


>gi|82544836|ref|YP_408783.1| multidrug resistance protein K [Shigella boydii Sb227]
 gi|81246247|gb|ABB66955.1| multidrug resistance protein K [Shigella boydii Sb227]
 gi|332093432|gb|EGI98490.1| multidrug resistance protein K [Shigella boydii 3594-74]
          Length = 387

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 88/235 (37%), Gaps = 17/235 (7%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL----ITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           N  + H    K  +LL+++  I      + WS+   +E  +S+  +     N   I +  
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYVYWSM--ELEDMISTD-DAYVTGNADPISAQV 61

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALD 118
           SG +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +
Sbjct: 62  SGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAE 121

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYL 176
             + +    +   +      L   G       +     + S   +L   +   ++    +
Sbjct: 122 VASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALV 181

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
               L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 182 MNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|320199942|gb|EFW74531.1| Multidrug resistance protein A [Escherichia coli EC4100B]
          Length = 387

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.0 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|294056638|ref|YP_003550296.1| secretion protein HlyD family protein [Coraliomargarita akajimensis
           DSM 45221]
 gi|293615971|gb|ADE56126.1| secretion protein HlyD family protein [Coraliomargarita akajimensis
           DSM 45221]
          Length = 374

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/363 (12%), Positives = 107/363 (29%), Gaps = 59/363 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           +I    S  + K  V  G ++  G  ++  +         + K  I+        E+  L
Sbjct: 60  QIAPLESARVSKIHVAVGDRVRAGDLIVDLDTSLIDAEGAVLKEQIQQSLMEAKLEQLTL 119

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +                                + F   +    ++L             
Sbjct: 120 E--------------------------------RQFASALQEAQQAL------------- 134

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIH 235
             + E    + R   S+  ++L  ++ L+      Q  L + E IV K   E  LRE + 
Sbjct: 135 -REAELSYKVNRVEHSALLEELKRLEPLY------QQQLIEAELIVAKKAREEVLREMLA 187

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
              + +  + +    A  +  + L  + +++ +           + +LE  R    + + 
Sbjct: 188 IMPSHIEALEQDAQRAVEQQQSALARL-QEMNEATSADHGYEEAVKLLEIRRNAFALRAQ 246

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G +   Q        +    ++ +V     T I   +    +  +  G  AT+ +P  
Sbjct: 247 HDGVVAEIQR-QPGETIEGGGSIVSLV-VDGPTRIVGFLPESNVSSIAVGTPATI-YPTV 303

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +        A + +I P +              +  +       D  ++L  G    +  
Sbjct: 304 SLKDAGVVPAHVVQISPAVYSLPERASPIRGQVIRGRRVTFEL-DREVQLVPGETVSIEI 362

Query: 416 TAK 418
            + 
Sbjct: 363 QSG 365


>gi|253699605|ref|YP_003020794.1| secretion protein HlyD [Geobacter sp. M21]
 gi|251774455|gb|ACT17036.1| secretion protein HlyD family protein [Geobacter sp. M21]
          Length = 333

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/331 (12%), Positives = 110/331 (33%), Gaps = 29/331 (8%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +   +T L     + +  ++    T    L+ L ++   + +       +  +       
Sbjct: 27  DGESSTALRISGNIEVTEVQLSFKTSGRVLERLVDEGIEVARGQVVARLEERELADALKL 86

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             +       S        +   +          E +++ + A       D    K LF 
Sbjct: 87  AQADEAAAAASLAELEAGNRREEVAQGAALLARAEAQAARVTA-------DYDRSKALFA 139

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           K  + +   +  +        E R ++ E++  L  + +      L+ A    E +    
Sbjct: 140 KEVIPRQQFDAAKAAYE----EARASVRERREALNLLRKGARPERLQAARAAHEGA---- 191

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
                    +++++  ++     T+ +PI+G ++  +S           P++ +      
Sbjct: 192 ---------LARVSTAKERLGYATLTAPISGVVLN-KSIEPGEQVAAGTPVVTLGDLKDC 241

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
              +  +   ++  VK G  A V       +  K F+  +  I         ++QT++  
Sbjct: 242 WL-KGYIPETELARVKLGQRARV--TA-DGLPGKAFEGRVSFISSQAEFTPKSVQTEKER 297

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             ++    ++ ++  +EL+ G PA+ +    
Sbjct: 298 VKLVYRVKISLANPGMELKPGMPADAVIDLG 328


>gi|145218878|ref|YP_001129587.1| secretion protein HlyD family protein [Prosthecochloris
           vibrioformis DSM 265]
 gi|145205042|gb|ABP36085.1| secretion protein HlyD family protein [Chlorobium phaeovibrioides
           DSM 265]
          Length = 323

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 69/229 (30%), Gaps = 40/229 (17%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q DL   +NL E++ +S+ +L+        S+ E      + +  L  +     E     
Sbjct: 129 QADLRRSRNLQEQDVISKAELDAVTAGATGSSAEHAGASGQYRAALALVKVREAE----- 183

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                   L          TI +P  G +          + Q  
Sbjct: 184 ------------------------LQNARLQLSYTTITAPADGHVARKNV-QPGQFVQPG 218

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q L+ +V  S   ++ A     Q+ +++ G    +R   +     K FK  +E I     
Sbjct: 219 QWLIGLV-GSSELWVVANFKETQLTNIRPGQKVDIRVDAFPS---KSFKGRVESISSGTG 274

Query: 376 QQ----DNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            +      +  +  + +V   + +  +     +  L  G         K
Sbjct: 275 SKFSLLPPDNASGNFVKVAQRVPVKIVFTETPDQPLAAGMSVVADVRVK 323


>gi|313500499|gb|ADR61865.1| Secretion protein HlyD family protein [Pseudomonas putida BIRD-1]
          Length = 360

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 81/254 (31%), Gaps = 17/254 (6%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           + +    +  + L    +   +    +K    + A + +++N+  R+  +    ++ N  
Sbjct: 101 VAQAQSADARATLERQDALIAQAEAAVKAAQAEVAFADHEVNRYSRLAEQGAGTVQ-NAQ 159

Query: 236 EQKNMLRHINELYDEANLEFANYLKEI---SRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           + ++ +         A        K++      +           + L   +       I
Sbjct: 160 QARSAVDQARARLANAQAARVAARKQVDILKAQVASADGQLKRAEAGLEKAQLDLSYTRI 219

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P+ G +   ++     Y      L+ +VP  +   +       Q+ HV+ G    +  
Sbjct: 220 TAPVDGMV-GERALRVGAYVNPGARLLSVVPLQQAYVV-GNFQETQLTHVQPGQPVRISV 277

Query: 353 PHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNN----IE 404
             ++       +  ++ I P      +    +  T  + +V+ +I      D+       
Sbjct: 278 DTFSGET---LQGHVQSIAPATGVTFAAVKPDNATGNFTKVVQRIPVKIVLDDGQPLLTR 334

Query: 405 LRNGFPAEVLFTAK 418
           LR G   E     +
Sbjct: 335 LRVGMSVEATIDTR 348



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 47/162 (29%), Gaps = 5/162 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK-----VSIKNL 106
              +   +    +G IK+  VE+  Q+  G  L T +  +    +D  +        ++ 
Sbjct: 48  VSADYTVVAPKVAGFIKQVLVEDNQQVTAGQLLATIDARDYQAALDAAQAQLLVAQAQSA 107

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                 E+        +  V     E              +               ++  
Sbjct: 108 DARATLERQDALIAQAEAAVKAAQAEVAFADHEVNRYSRLAEQGAGTVQNAQQARSAVDQ 167

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              R+ +    R+    +  +L+A ++S    L   +   EK
Sbjct: 168 ARARLANAQAARVAARKQVDILKAQVASADGQLKRAEAGLEK 209


>gi|193069757|ref|ZP_03050708.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli E110019]
 gi|192956959|gb|EDV87411.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli E110019]
          Length = 387

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGIISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGIISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|220927211|ref|YP_002502513.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
 gi|219951818|gb|ACL62210.1| secretion protein HlyD family protein [Methylobacterium nodulans
           ORS 2060]
          Length = 390

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 80/251 (31%), Gaps = 14/251 (5%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +LE   +L RA+++  + DL   +    + A       Q     Y S    ++
Sbjct: 118 GQDAALANLEATRALQRAVIAQARADLAASEAEAARTAFDLTRYRQLSANQYASEQRFQQ 177

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + K     + + +   +      L  I     Q +       ++  I         +
Sbjct: 178 AEADHKKAAAAVEKAHATLDA-AERQLAVIDTQTRQVRAAREQARAEQDIARLNLGYTEV 236

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV-- 350
            +P+ G +V N+S  + +YA     L+ +VP     ++ A     Q+  ++ G   +V  
Sbjct: 237 RAPVDG-VVGNRSARTGSYATVGASLVSLVPADG-LWVDANFKESQLARMRPGQRVSVVA 294

Query: 351 ------RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
                  F  + +       A    + P  +  +     Q    V +++          +
Sbjct: 295 DVLPDETFSGHVESLAPATGAQFSILPPENATGNFTKIVQRV-PVRIRLDGEGARLG--K 351

Query: 405 LRNGFPAEVLF 415
           LR G       
Sbjct: 352 LRPGLSVTATV 362



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 50/164 (30%), Gaps = 12/164 (7%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL-------KKVSIK 104
              +V  I S   G +    V +  +I  G  LL  +D +    +         +  ++ 
Sbjct: 65  VGGDVTVIASKVPGFVAAVAVGDNQRIRAGDLLLRIDDRDYRAALARAEAAVAGQDAALA 124

Query: 105 NLRC-----HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           NL            ++  D   ++ +    AF+    + L           +        
Sbjct: 125 NLEATRALQRAVIAQARADLAASEAEAARTAFDLTRYRQLSANQYASEQRFQQAEADHKK 184

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +++     + +       ++ ++  +RA     + +  + +
Sbjct: 185 AAAAVEKAHATLDAAERQLAVIDTQTRQVRAAREQARAEQDIAR 228


>gi|75908757|ref|YP_323053.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75702482|gb|ABA22158.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 471

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 70/228 (30%), Gaps = 27/228 (11%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           + +  +      L    + +        +   +    R  +   + D    + LF++ A+
Sbjct: 141 ILSTDLKQAEAELAALESEVARATTQVSNARTQVERARLEVVQAEADAQRQERLFKEGAI 200

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S                   E   EQ             A  E     ++    +   + 
Sbjct: 201 S-------------------EQAAEQARTQAKTATQALRAATEQVRTEEQA---VAAAKG 238

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               + + +   ++ R    + SP+ G I   +     N  Q    ++KI   S++  + 
Sbjct: 239 RVFAQKAVVAQTKERRSYTRLTSPLNGVITE-RVTEPGNLLQAGGEVLKIADLSQIKVV- 296

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +V+  ++  ++ G +  VR   + D    +    + +I P       
Sbjct: 297 VQVSELELGQIQVGQSVQVRLDAFPDR---EITGRVTRISPTADATAR 341



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/134 (8%), Positives = 49/134 (36%), Gaps = 5/134 (3%)

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEK 129
           G  + +G  +   +DI  +  +   +  +  L     R       +       + +V++ 
Sbjct: 125 GDTVRRGQNVGQLDDIILSTDLKQAEAELAALESEVARATTQVSNARTQVERARLEVVQA 184

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             +++ ++ L   G      ++       +  ++L+    ++R+        + +    +
Sbjct: 185 EADAQRQERLFKEGAISEQAAEQARTQAKTATQALRAATEQVRTEEQAVAAAKGRVFAQK 244

Query: 190 ALLSSHQKDLTMMK 203
           A+++  ++  +  +
Sbjct: 245 AVVAQTKERRSYTR 258


>gi|126461681|ref|YP_001042795.1| secretion protein HlyD family protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126103345|gb|ABN76023.1| secretion protein HlyD family protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 368

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 71/257 (27%), Gaps = 26/257 (10%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            +  + +     + +  L     +    +L   + L +K   S   L+       ++   
Sbjct: 116 EVEQLRVAYAQAQAQEKLAADDAAYLANELERQRALSQKGVASTTSLDDARHESLRA--- 172

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                       + +  +  +        L  ++             ++          +
Sbjct: 173 ------------KELLLVARQTTASALAALGGVADGPVDEHPKVRTALAARDDAAYQLAR 220

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P  G +    SF         Q L  +V      +I A     Q+  +  G  A 
Sbjct: 221 TEVRAPADGIVYQAASFKPGQMVTAGQSLFSLVETGD-VWIDANFKETQLAGIAPGQKAE 279

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE----- 404
           V F  + D      +A +E +      + + L  Q      +K+T         E     
Sbjct: 280 VTFDLHPDRPY---EATVEAVGAGTGSEFSLLPAQNATGNWVKVTQRVPVRLRFEEGADI 336

Query: 405 --LRNGFPAEVLFTAKN 419
             L +G  AEV      
Sbjct: 337 AGLASGLSAEVSVDTGR 353



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/157 (9%), Positives = 47/157 (29%), Gaps = 5/157 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V +   + +G  L   +       +   + ++ + R  ++  + A      +
Sbjct: 71  SGRVTRVSVSDNRPVTKGEVLFEIDPEPHRIALAKAEAAVASARLEVEQLRVAYAQAQAQ 130

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +          +L     +     S+      +S+  +    L     + + R    +
Sbjct: 131 EKLAADDAAYLANEL-----ERQRALSQKGVASTTSLDDARHESLRAKELLLVARQTTAS 185

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             + L  +      +   ++        +   L + E
Sbjct: 186 ALAALGGVADGPVDEHPKVRTALAARDDAAYQLARTE 222


>gi|323187908|gb|EFZ73203.1| multidrug resistance protein K [Escherichia coli RN587/1]
          Length = 387

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 82/232 (35%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N    H    K   LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNEKHSDRRKYFALLAVVLFIAFSGAYAYWSMELKDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|323139837|ref|ZP_08074869.1| efflux transporter, RND family, MFP subunit [Methylocystis sp. ATCC
           49242]
 gi|322394917|gb|EFX97486.1| efflux transporter, RND family, MFP subunit [Methylocystis sp. ATCC
           49242]
          Length = 423

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 66/207 (31%), Gaps = 14/207 (6%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + + +    K+ L      +E+   L     +  +      +   +    +  ++   A 
Sbjct: 138 VARAQLAKDKAGLAYARINYERSRRLAATKAVSPDVVDNAKSVYDQAQAQVGLDEAMVAQ 197

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAK 333
             ++L   E       I+SP+ GT+V     +    A   Q   L  I        +   
Sbjct: 198 REAELRAAEINLGYTGIISPVDGTVVSRSVETGQTVAASFQTPTLFLIAEDLTAMQVDTN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V+   I  VK G  A+     +       F   + ++     Q    +Q    Y+ ++  
Sbjct: 258 VSESDIGEVKLGDKASFTVESFPKR---VFHGEVTQV----RQSPQTIQNVVTYDAVIS- 309

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
              A + + + L+ G  A    T    
Sbjct: 310 ---APNRDGL-LKPGMTATARITVDER 332



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 53/140 (37%), Gaps = 3/140 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P+   V++SG I     V  I S  SG+I+    +  +++++G      +      ++D
Sbjct: 72  GPVTRKVTASGAINPVITVQ-IGSYVSGVIQARYCDYNTRVVKGQLCAKIDPRPYQIVVD 130

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K S+   R  +  +K+ L +    Y+   +   +  + +   +     +        +
Sbjct: 131 QNKASLAVARAQLAKDKAGLAYARINYERSRRL--AATKAVSPDVVDNAKSVYDQAQAQV 188

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
                 +  +   +R+  +N
Sbjct: 189 GLDEAMVAQREAELRAAEIN 208


>gi|310644123|ref|YP_003948881.1| efflux transporter, rnd family, mfp subunit [Paenibacillus polymyxa
           SC2]
 gi|309249073|gb|ADO58640.1| Efflux transporter, RND family, MFP subunit [Paenibacillus polymyxa
           SC2]
          Length = 500

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 45/367 (12%), Positives = 109/367 (29%), Gaps = 44/367 (11%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    VE G  + +G+ L   +         + ++ +   +  ++  K+ L       
Sbjct: 100 GRILNTMVEVGDSVEKGSVLAKLDT-------SVYQLQLDRAKATMEKAKAGLSQAEASV 152

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +    S + Q+     K     +      I+    ++        +    + D    
Sbjct: 153 QSAQAGIHSSQSQVDAAQSKLQELNNGAKKQEIAQSQNAVTAATN---AYNKKKADAART 209

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            SL +A  +S  ++      L       ++  + QE++        +E   +    +   
Sbjct: 210 QSLFQAGAASLSENENAQLELTN---AQKSLSDAQEQLSLLLAGASQEQRAQASAGVEQA 266

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               + A        ++      Q Q T+ D ++       + ++ T+ SPIAG ++  +
Sbjct: 267 RAGLETAMA----TKQQGLASKAQAQATYEDALAAYEQSSLSLKKATLTSPIAGVVIEKK 322

Query: 305 SF--------SSSNYAQQSQPLMKIVPHSKLTYIR----AKVTPKQIQHVKKGYTATVRF 352
                     S +      + L  ++P      +      KV       ++ G    +  
Sbjct: 323 VSDGQLGSSGSEAFVVGNIKTLKVLLPVPDSEILSWKKNQKVNISLYNEIRIGTVTQI-- 380

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                       A    I+  +S  +  L  +      +     + +     L      E
Sbjct: 381 -------YPSTNAKTGSINVEVSLPNPELDWKP---GQVISASKSVNQAEALLVP---VE 427

Query: 413 VLFTAKN 419
            + +  +
Sbjct: 428 SVISTGS 434


>gi|309791833|ref|ZP_07686320.1| efflux transporter, RND family, MFP subunit [Oscillochloris
           trichoides DG6]
 gi|308226155|gb|EFO79896.1| efflux transporter, RND family, MFP subunit [Oscillochloris
           trichoides DG6]
          Length = 606

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/335 (12%), Positives = 98/335 (29%), Gaps = 25/335 (7%)

Query: 91  ETTDLIDLKKVSIKNLRCH----IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
                +D  +V +   +      ++T  +AL    ++Y  +       E Q  +   +  
Sbjct: 207 RAQTTLDQGRVDLAAAKERARIDLETRANALRNAQDEYSRIYWENRELERQPRELAQERK 266

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              ++       +       ++   +++       +   + L++ +S     L   K   
Sbjct: 267 DMETQAMRNVKDAEAALQSAQVAYDQAVRDEVNTTQANEASLQSAISKRDTLLAGAK--A 324

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           E+ A ++  + + +  V + T   R +          I +   E      N     SR+ 
Sbjct: 325 EELADARAAVQRAQAQVDQLTGANRSSSLAASQSSVTIAQAGLEKLTADPNQASLTSRET 384

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
              +   A     +   ++  +  T+ +P A T+           A  +  +  IV    
Sbjct: 385 AVLRAEIA-----IKQAQRNLDLATLSAPFAATVASVDMN-IGETADATSTIA-IV-DLA 436

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
             +I   +    I  +  G    +                   +  +  Q   + Q    
Sbjct: 437 SFHIDVPIDELDIAEIAIGQRVRITLDALPGSEIG------GSVSAVAPQATRSDQGTTT 490

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           Y V + +   +       +R G  A V       +
Sbjct: 491 YAVTVDLDADSKG-----VRPGMTAVVAIVTSEKS 520



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 85/263 (32%), Gaps = 19/263 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++G I        ++   SG I    V+ G  + +  PL   + +     ++  
Sbjct: 65  IASTVSATGNIEPAAEA-VLRFSQSGTISAILVKPGDTVAKDAPLARVDSVSLQLSLEQA 123

Query: 100 KVSIKNLRCH------------IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +  ++  +              +   ++ L    ++Y     +  S +            
Sbjct: 124 QADLRQAQAEYEDLLAGASEADLAEARARLAQARSQYQQTVSSVSSADIAAARADLASAQ 183

Query: 148 TCSKVFNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                   G +S  +  + +       ++   R+DL       R  L +    L   ++ 
Sbjct: 184 ARLDRLMAGPASDELAAANEQVQRAQTTLDQGRVDLAAAKERARIDLETRANALRNAQDE 243

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELR----ENIHEQKNMLRHINELYDEANLEFANYLKE 261
           + +      +L +Q R + +   ++      N+ + +  L+     YD+A  +  N  + 
Sbjct: 244 YSRIYWENRELERQPRELAQERKDMETQAMRNVKDAEAALQSAQVAYDQAVRDEVNTTQA 303

Query: 262 ISRDLEQNQRTFADEMSKLTILE 284
               L+         ++     E
Sbjct: 304 NEASLQSAISKRDTLLAGAKAEE 326


>gi|209695371|ref|YP_002263300.1| secretion protein, HlyD family [Aliivibrio salmonicida LFI1238]
 gi|208009323|emb|CAQ79589.1| secretion protein, HlyD family [Aliivibrio salmonicida LFI1238]
          Length = 373

 Score = 67.3 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 79/250 (31%), Gaps = 24/250 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +  QL+             +   +    ++L++    + +        + + +     L 
Sbjct: 79  QPNQLVAQGEVLAKLNPVDYEIAVKQAEQNLEIAGQNVGAQTAMIASSQARLTSANVELE 138

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + +     +  + E+  VSQ+D +Q    +  +   +     + +   R +         
Sbjct: 139 NVRLQSGRILEMAERGVVSQSDADQSRASLATARANVVNAQADLEKSKRQLGAD------ 192

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                         ++       +  L   +   E+  I +P AG +  N S S   YA 
Sbjct: 193 -------------GEDNSQIKAALLALEQAQINLERTEIKAPTAGGV-SNFSLSEGFYAS 238

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             QP+M  V  ++  +I A      + ++K G    V          K  K  +  +D  
Sbjct: 239 VGQPIMTFV-STESIWIEAYFRENSLGNIKVGDAVEV---ALDFAPGKVIKGTVTSVDWG 294

Query: 374 ISQQDNNLQT 383
           +    N+   
Sbjct: 295 VDWGQNDQAG 304



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 56/160 (35%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIK 104
            +  VV IK   SG +    V+    + QG  L     +       +    +++   ++ 
Sbjct: 58  VKGYVVPIKPQVSGQVFDILVQPNQLVAQGEVLAKLNPVDYEIAVKQAEQNLEIAGQNVG 117

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                I + ++ L   N + + + +    R  ++ +      S   +      ++    +
Sbjct: 118 AQTAMIASSQARLTSANVELENV-RLQSGRILEMAERGVVSQSDADQSRASLATARANVV 176

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +    +S      D E+ S +  ALL+  Q  + + + 
Sbjct: 177 NAQADLEKSKRQLGADGEDNSQIKAALLALEQAQINLERT 216


>gi|330959095|gb|EGH59355.1| secretion protein HlyD [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 390

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+       +  L +  +I +  W IL                IE SV++ G +    
Sbjct: 1   MKRSRYPRRALLVALCLFPVIAVCAWQILPDGTGNASTVTVTRGTIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  SG I K   + G Q+ +G  L+  +       +D  + +I NL+  +  ++
Sbjct: 61  YV-DVGSQASGQIMKIHAQVGDQVKEGDLLVEIDPSTQKAKLDAARYAIDNLKAQLQEQR 119

Query: 115 SALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    K      L     +R E +     ++ +T ++V  F   I     +L+    
Sbjct: 120 ALHELAEQKQQRQKSLAAGGATRAEDVQAAQSEFRATQARVDMFKAQILEAQAALRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 AL 181



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 10/212 (4%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKSLAAGGATRAEDVQAAQSEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIYAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWSSTVRQILPVPPRPLDQANQGGGSPSSSRKSGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            V+L    L   +++  L     A++ F A  
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTAQIFFVAGK 321


>gi|110598237|ref|ZP_01386513.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
 gi|110340152|gb|EAT58651.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
          Length = 417

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 85/222 (38%), Gaps = 20/222 (9%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           ++L + NA    +L  Q R +       + ++  ++ ++   + +  + N + A      
Sbjct: 107 QSLAQLNAARSQNLEAQSRKLKAEDDFRKASLLYRERLISESDFIASKTNAQAA------ 160

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPL 318
               + +  T A   S L   +   ++  + +PI+G+I+   S                +
Sbjct: 161 RATYQSSLYTIAQNKSLLDQNQDRLKKSIVRAPISGSIIALNSKPGERVVGTGQFPGTEV 220

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-PIISQQ 377
           +++  +     ++ +V    I +VK G   ++    Y D     F+ I+ +I    IS+ 
Sbjct: 221 LRLA-NLDSMQVKVEVNENDIVNVKAGNPVSITVDAYGDRI---FRGIVHEISNSAISKA 276

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               +    + V ++I      +++  L+ G  A     A+ 
Sbjct: 277 AGTQEEVTNFSVKIRI-----FNHDRLLKPGMSATADIEAQR 313



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 3/156 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V+++G+I  E  +V   SP  SG I +  V++G  + QG  L   +     + ++     
Sbjct: 54  VTATGKIEPE--LVVAMSPDVSGEIIELPVKDGQSVSQGDLLFKIQPDIYINQVEQSLAQ 111

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   R      +S      + +      +  R     DF+    +  +    Y  S    
Sbjct: 112 LNAARSQNLEAQSRKLKAEDDFRKASLLYRERLISESDFIASKTNAQAARATYQSSLYTI 171

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +    L       L +  +    S     L+S   +
Sbjct: 172 AQNKSLLDQNQDRLKKSIVRAPISGSIIALNSKPGE 207


>gi|56414772|ref|YP_151847.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197363700|ref|YP_002143337.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198245967|ref|YP_002216790.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|56129029|gb|AAV78535.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197095177|emb|CAR60727.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197940483|gb|ACH77816.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
          Length = 390

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 99  QAFERAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 159 ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 211

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 212 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   T+    Y D    K+   +  +D          P  +   N ++  
Sbjct: 259 KETQLANMRIGQPVTIITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 316

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 317 QRLPVRVELDARQLEQHPLRI 337



 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I +  SG + K   +N   + +G  L+T +  +     +  K ++ +      
Sbjct: 57  VAGNQVQIMAQVSGSVTKVWADNTDFVKEGDVLVTLDQTDAKQAFERAKTALASSVRQTH 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLT 169
                   L    DV + A    +  L   +   ++     +   +   +V  +      
Sbjct: 117 QLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGREELQHARDAVASAQAQLDV 176

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
            ++    N+      +LE++ ++ +A        L + + 
Sbjct: 177 AIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWLALERT 216


>gi|327481828|gb|AEA85138.1| multidrug resistance efflux pump [Pseudomonas stutzeri DSM 4166]
          Length = 371

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 54/410 (13%), Positives = 121/410 (29%), Gaps = 85/410 (20%)

Query: 11  RNHPASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +    S+  MTL++++G++ ++  W +  P   S+ ++        +  +    +G + +
Sbjct: 29  QPSRRSIVLMTLVALVGVLAILYAWQLW-PFTGSLVTTENAYVRGQLTVLAPQVAGYVTE 87

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            +V++  Q+ QG  L+  +D +        +  +   R   D  +  L+ L+ +      
Sbjct: 88  VRVQDFEQVRQGQVLVRIDDRQY-------QQRVAQRRAERDAARFELENLDQQLAADRA 140

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              +R   L  F  +     ++     +  +     + +        +           R
Sbjct: 141 TLAARRADL--FAAEAEEARARADERRVDELAERGSVSIRERDQTRASARAASANVRKAR 198

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A +                                         I EQ      I+    
Sbjct: 199 AAIE----------------------------------------IAEQTLKASGISRGGL 218

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +A +E A                     + L   E       I++P  G +         
Sbjct: 219 QARVEIAQ--------------------ATLHQAEIDLANTEIVAPGDGRVSEVGVR-LG 257

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            Y      L+ +VP     ++ A     Q  +++ G   +         R       IE+
Sbjct: 258 QYVTAGTQLLFLVPP--KLWVIANYKETQTANMRPGQPVSFEVDALNGAR---LTGRIER 312

Query: 370 IDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNN---IELRNGFPA 411
           I P    +      +  T  + +V+ ++   +A   +      LR G   
Sbjct: 313 IAPATGSEFSLLRPDNATGNFTKVVQRLPVRIAIDPDQPLVERLRPGLSV 362


>gi|331648033|ref|ZP_08349123.1| multidrug resistance protein K [Escherichia coli M605]
 gi|331042893|gb|EGI15033.1| multidrug resistance protein K [Escherichia coli M605]
          Length = 387

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKEA 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVIE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  V    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNVISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 85/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K   LL+++  I L   ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSDRRKYFALLAVVLFIALSGAYAYWSMELKDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD- 180
            +    +   +      L   G       +     + S   +L   +   ++     ++ 
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKEALEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 181 -LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVIEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|225023679|ref|ZP_03712871.1| hypothetical protein EIKCOROL_00542 [Eikenella corrodens ATCC
           23834]
 gi|224943561|gb|EEG24770.1| hypothetical protein EIKCOROL_00542 [Eikenella corrodens ATCC
           23834]
          Length = 358

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 84/307 (27%), Gaps = 40/307 (13%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L      +   +  R E++    G++    + +      +    L         +    
Sbjct: 74  RLEFARMDVASLYAGRVEEITVSEGQFVEAGTVLARISSQTAEAQLSEAQAGKAQLEQTV 133

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
              + +    R  L + Q +    + LF  N +SQ +LN +      +            
Sbjct: 134 RRAQAQIEAQRQQLRTAQMEADNARQLFRDNLISQTELNTRLAQRDAARA---------- 183

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                               ++       + Q       +K+  +       ++ +P AG
Sbjct: 184 -------------------AVQAAEAARNEAQAGVGQARAKMAQVSSVIGDLSVRAPQAG 224

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   +     N       ++ ++  +    I   +    +  +  G  A ++      +
Sbjct: 225 RV-EYRLAEPGNVLPAGGKVVSLLNLNDA-SISLFLPAPTVNQIPLGSEARIKMDGLDAV 282

Query: 359 REKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
               F A +  I           +    +T+  + V L+I     +     L+ G  A  
Sbjct: 283 ----FPAKVTYIASEAQFTPKFVETAEERTKLMFRVKLQIPADVVAKYQGYLKGGMTATG 338

Query: 414 LFTAKNT 420
                + 
Sbjct: 339 FVRTDSK 345



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/188 (11%), Positives = 58/188 (30%), Gaps = 4/188 (2%)

Query: 26  IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           IG      ++   P+     ++G +      +++ S ++G +++  V  G  +  GT L 
Sbjct: 51  IGFFAFRQYAAPDPLAGIAHANGRLEFA--RMDVASLYAGRVEEITVSEGQFVEAGTVLA 108

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                     +   +     L   +   ++ ++    +    +   ++  +   D L   
Sbjct: 109 RISSQTAEAQLSEAQAGKAQLEQTVRRAQAQIEAQRQQLRTAQMEADNARQLFRDNLISQ 168

Query: 146 HSTCSKVFNYGISSVYRSLKMKL--TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               +++     +                 +   R  +   SS++  L     +   +  
Sbjct: 169 TELNTRLAQRDAARAAVQAAEAARNEAQAGVGQARAKMAQVSSVIGDLSVRAPQAGRVEY 228

Query: 204 NLFEKNAV 211
            L E   V
Sbjct: 229 RLAEPGNV 236


>gi|91782252|ref|YP_557458.1| major facilitator superfamily efflux pump membrane fusion protein
           [Burkholderia xenovorans LB400]
 gi|91686206|gb|ABE29406.1| MFS efflux pump, membrane fusion protein, EmrA subfamily
           [Burkholderia xenovorans LB400]
          Length = 420

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 91/295 (30%), Gaps = 28/295 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + Q++                 +     +L   + ++R ++ +    + + +L +
Sbjct: 87  AVNADDTQVVKAGDPLIVLDPADARVALEQAEANLAQTVRQVRGLFADDNQYQAQVALRQ 146

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + LS  Q DL     + +  AVSQ +                  I   ++ ++      D
Sbjct: 147 SDLSRAQDDLKRRLTVAQTGAVSQEE------------------ISHARDAVKSAQAAVD 188

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A  +  +     +     N        +K+        +  + +P+ G +   +S    
Sbjct: 189 AAQQQLESNRALTANTTIANHPNVQAAAAKVRDAYLNHARNVLPAPVTGYVAK-RSVQVG 247

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR--------EK 361
                  PLM IVP     ++ A     Q++H++ G    +    Y              
Sbjct: 248 QRVSPGTPLMAIVPLHDA-WVDANFKEVQLKHMRIGQPVELTADVYGSSVPYHGKVVGFS 306

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                   + P  +   N ++  +   V + +       + + +     A+V   
Sbjct: 307 AGTGSAFSLLPAQNATGNWIKVVQRLPVRIALDPQELDKHPLRIGLSMQADVNIK 361



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 48/136 (35%), Gaps = 5/136 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +     ++   +  G PL+  +  +    ++  + ++        
Sbjct: 70  VSGNVVQITPQVTGTVVAVNADDTQVVKAGDPLIVLDPADARVALEQAEANL----AQTV 125

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +   L   +N+Y       +S   +  D L +   T ++        +  +     +  
Sbjct: 126 RQVRGLFADDNQYQAQVALRQSDLSRAQDDLKRRL-TVAQTGAVSQEEISHARDAVKSAQ 184

Query: 172 RSIYLNRLDLENKSSL 187
            ++   +  LE+  +L
Sbjct: 185 AAVDAAQQQLESNRAL 200


>gi|229529398|ref|ZP_04418788.1| membrane-fusion protein [Vibrio cholerae 12129(1)]
 gi|229333172|gb|EEN98658.1| membrane-fusion protein [Vibrio cholerae 12129(1)]
          Length = 377

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +   
Sbjct: 43  IEKQAVAVGQIMPS-HSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDA 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              +     +++++   L  L    K  ++   ++       D   K      K  N  +
Sbjct: 102 STELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLEL 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMKNLFEK 208
                +   +     ++Y               E   S   +  ++    L  MKN+  K
Sbjct: 162 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFK 221

Query: 209 NAVSQNDLNQQERIVYKS 226
            +VS++D  Q    +  S
Sbjct: 222 GSVSEHDAAQLNAGMPAS 239



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 87/225 (38%), Gaps = 35/225 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  ++    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 98  LTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQ 157

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM---------KIV 322
                 S    + + +   T+ +PI+GTI+  +        +  +P++         +++
Sbjct: 158 NLELIRSGEASIGQAKLSSTLYAPISGTILNIK-------VEVGEPIISTESSQAATEMI 210

Query: 323 PHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + +     +  V+      +  G  A++    Y    E+     + K+  I S++ NN
Sbjct: 211 QLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP---EQVINGQLTKV-AIQSERLNN 266

Query: 381 LQ---TQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +    + +   ++V +   D+     N+ LR+GF A    T + 
Sbjct: 267 PENKDGKSFDNGFQVEIGQLDI---PENMTLRSGFSASAKITLQR 308


>gi|16264400|ref|NP_437192.1| OMA family outer membrane saccharide export protein [Sinorhizobium
           meliloti 1021]
 gi|15140537|emb|CAC49052.1| putative OMA family outer membrane saccharide export protein,
           similar to ExoF [Sinorhizobium meliloti 1021]
          Length = 455

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/202 (10%), Positives = 63/202 (31%), Gaps = 7/202 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            L+ L+ +++   +  ++ E    + +     ++ +  +     L++           +F
Sbjct: 180 SLLGLENINLLARKARLEAELKHANKIEFPGSLISRQDDRAVTLLME-------QERSIF 232

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                 +   ++        +    + L+ +       ++  QK+L  + +L  K   + 
Sbjct: 233 QARREGLETQIRALENLRAFLEKELISLDKQLVFHDRQIALIQKELGDVSSLVSKGLAAA 292

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
                 ER + +   E            + I++           Y+ E++  L   Q   
Sbjct: 293 PREMSLERALAQYQSERLAGETSLLRTRQEISKTEISILELRNRYVNEVTATLRLTQAEL 352

Query: 274 ADEMSKLTILEKTREQKTILSP 295
                K     +   +  I +P
Sbjct: 353 DALGRKAETAIELLHESEISAP 374


>gi|332967729|gb|EGK06836.1| multidrug efflux MFS membrane fusion protein [Kingella kingae ATCC
           23330]
          Length = 399

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 49/368 (13%), Positives = 102/368 (27%), Gaps = 81/368 (22%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSIL-----LPIEISVSSSGEILNEDNVVEIKSPFS 64
           +RN    L    + + IG      W+         +E S ++        + V+I +   
Sbjct: 17  QRNKKPLLAMTIIFAAIG----AGWAAFHFGSWQHLEESENAY----VNGHTVQISAQLH 68

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V++   +  G  LLT                + N    +  EK+    +    
Sbjct: 69  GRVSQILVDDTDTVQAGQVLLT----------------LDNNDATLALEKAKSQLV---- 108

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                    +   N GI++       +   ++   +     E  
Sbjct: 109 --------------------LAVRQNARLNSGINAAQAQAAAQAAEVKRAQVAVQKAEA- 147

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                        D    ++L   +AVS  +L+  +  +  +   L+      +      
Sbjct: 148 -------------DWKRRESLRGSDAVSAEELSHVKVALDNARATLQAAQAAVQAAKAQE 194

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               D    +             + Q       S         ++  + +P++G +    
Sbjct: 195 QAQRDAVGKDIP----------LEQQPEVMAAASAFKEAWLAVQRTQVRAPVSGQVAKRN 244

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                       PLM IVP +   ++       Q+  +K G    +    Y      KFK
Sbjct: 245 V-QLGQQIGAGAPLMAIVPMND-LWVDVNFKETQLAKLKAGQEVELTSDFYGSDV--KFK 300

Query: 365 AIIEKIDP 372
             I+ +  
Sbjct: 301 GTIQGLSA 308


>gi|330952780|gb|EGH53040.1| secretion protein HlyD [Pseudomonas syringae Cit 7]
          Length = 402

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 74/204 (36%), Gaps = 20/204 (9%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   ++ + +  RA + + Q +    ++L    A+SQ
Sbjct: 101 EVSLQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRAAVQTAQDNYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +    +  ++  +  L     L D+  +     +K  +  L Q     
Sbjct: 161 EELSHARDSLTSA----QSALNNIQQQLSTSVALVDDTVVSSHPDVKAAAAQLRQAYLAN 216

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A              + T+++P+ G +   ++       Q     M ++P     +I A 
Sbjct: 217 A--------------RSTLVAPVTGYVAK-RTVQLGQRIQPGTATMAVIPLD-QLWIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD 357
               Q+  ++ G    +    Y  
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGS 284



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 68/191 (35%), Gaps = 13/191 (6%)

Query: 7   KNLKRNHPASLKR----MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
               +  P S KR    + L  ++ I+ L  W+           + +     NVVEI   
Sbjct: 11  AQAPQQEPKSGKRKFLLIGLAIVVVILALGIWAWYEIYGQWSEETDDAYVNGNVVEITPL 70

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G +     ++G  + +G  LL F+  +        +VS+++   ++      +  L +
Sbjct: 71  VTGTVISIGADDGDLVHEGQVLLKFDPSDA-------EVSLQSAEANLGKVVRQVRGLYS 123

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             D ++    ++   +      Y+    +    G +     L      + S      +++
Sbjct: 124 NVDGMKAQLAAQRAAVQTAQDNYN--RRRSLAAGGAISQEELSHARDSLTSAQSALNNIQ 181

Query: 183 NKSSLLRALLS 193
            + S   AL+ 
Sbjct: 182 QQLSTSVALVD 192


>gi|291283604|ref|YP_003500422.1| Drug resistance MFS transporter membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O55:H7 str. CB9615]
 gi|209764564|gb|ACI80594.1| multidrug resistance protein K [Escherichia coli]
 gi|290763477|gb|ADD57438.1| Drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O55:H7 str. CB9615]
          Length = 387

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+I+  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAIVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|82777771|ref|YP_404120.1| multidrug resistance protein K [Shigella dysenteriae Sd197]
 gi|309784920|ref|ZP_07679553.1| multidrug resistance protein K [Shigella dysenteriae 1617]
 gi|81241919|gb|ABB62629.1| multidrug resistance protein K [Shigella dysenteriae Sd197]
 gi|308927290|gb|EFP72764.1| multidrug resistance protein K [Shigella dysenteriae 1617]
          Length = 387

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 85/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K ++LL+I+  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYLSLLAIVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|26248746|ref|NP_754786.1| multidrug resistance protein K [Escherichia coli CFT073]
 gi|227887417|ref|ZP_04005222.1| MFP family membrane fusion protein [Escherichia coli 83972]
 gi|306814538|ref|ZP_07448700.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli NC101]
 gi|331658526|ref|ZP_08359470.1| multidrug resistance protein K [Escherichia coli TA206]
 gi|26109152|gb|AAN81354.1|AE016764_36 Multidrug resistance protein K [Escherichia coli CFT073]
 gi|227835767|gb|EEJ46233.1| MFP family membrane fusion protein [Escherichia coli 83972]
 gi|305851932|gb|EFM52384.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli NC101]
 gi|307554416|gb|ADN47191.1| multidrug resistance protein K [Escherichia coli ABU 83972]
 gi|320196217|gb|EFW70841.1| Multidrug resistance protein A [Escherichia coli WV_060327]
 gi|331054191|gb|EGI26218.1| multidrug resistance protein K [Escherichia coli TA206]
          Length = 387

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKEA 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVIE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 83/232 (35%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K   LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSDRRKYFALLAVVLFIAFSGAYAYWSMELKDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKEALEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVIEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|114048312|ref|YP_738862.1| secretion protein HlyD family protein [Shewanella sp. MR-7]
 gi|113889754|gb|ABI43805.1| secretion protein HlyD family protein [Shewanella sp. MR-7]
          Length = 364

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 88/268 (32%), Gaps = 20/268 (7%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           ++   + D E   + ++A     +     ++ +    + +  D  +QER+  +    +  
Sbjct: 88  ALAKAKSDYETVLNSVKANNEGVKAAEAKLQAMRASYSNAVKDAERQERLYRQDPGAISV 147

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              E     R        A         E +    +N        S +   E+ R+   +
Sbjct: 148 RRLEIAQASRETASSQVSAAEADVKRAIEAAGVNGENNSQLLSARSAVHKAERDRQNTHV 207

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++P  G I    +     +     P M ++      +I A++T   + +++ G    +  
Sbjct: 208 VAPSRGVITDLNTD-VGQFINAGAPAMTLIAIHD-VWISAELTENNLGNIQVGDNVAILL 265

Query: 353 PHYADIREKKFKAIIEKID--------------PIISQQDNNLQTQEYYEVILKITDLAF 398
                I  + F+  I  I               P +S   + L+  + + V +  +    
Sbjct: 266 ---DSIPGQLFRGQIRSIGYGVDDGKKQAVGSLPTVSNSRDWLRQAQRFPVKVSFSSDDM 322

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEI 426
                 LR G  A++L   +  +L   +
Sbjct: 323 PPA-ASLRVGGQADILVYTEEHSLMNPL 349



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 64/194 (32%), Gaps = 18/194 (9%)

Query: 21  TLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           TL  +  I+ L+ W +L     P          ++       I +  +G I K  V++  
Sbjct: 16  TLGLLASIVILLIWYLLADRMTPYSSQARVQAFVVP------IATEVTGQILKVYVQDNQ 69

Query: 77  QILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            + +G PL   +         +     +    S+K     +   ++ L  +   Y    K
Sbjct: 70  DVAEGDPLFDIDPEPYDIALAKAKSDYETVLNSVKANNEGVKAAEAKLQAMRASYSNAVK 129

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLL 188
             E +E       G       ++      +    +      + R+I    ++ EN S LL
Sbjct: 130 DAERQERLYRQDPGAISVRRLEIAQASRETASSQVSAAEADVKRAIEAAGVNGENNSQLL 189

Query: 189 RALLSSHQKDLTMM 202
            A  + H+ +    
Sbjct: 190 SARSAVHKAERDRQ 203


>gi|331684027|ref|ZP_08384623.1| multidrug resistance protein K [Escherichia coli H299]
 gi|331078979|gb|EGI50181.1| multidrug resistance protein K [Escherichia coli H299]
          Length = 387

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/218 (11%), Positives = 79/218 (36%), Gaps = 11/218 (5%)

Query: 22  LLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           LL+++  I     ++        + S+ +     N   I +  SG +     ++ + + Q
Sbjct: 19  LLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQ 78

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           G  L++ +  + T  ++  K ++ N+     + ++  ++ + +  + +    +   +   
Sbjct: 79  GDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNR 138

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRLDLENKSSLLRALLS 193
              L   G       +     + S   +L   +   ++    +    L  +  ++ A  +
Sbjct: 139 RVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADA 198

Query: 194 SHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
           + +  L + +   +      ++Q  +   E +    +L
Sbjct: 199 TKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|148241814|ref|YP_001226971.1| membrane-fusion protein [Synechococcus sp. RCC307]
 gi|147850124|emb|CAK27618.1| Membrane-fusion protein [Synechococcus sp. RCC307]
          Length = 399

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 78/245 (31%), Gaps = 41/245 (16%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRE--------NIHEQKNMLRHINELYDEANLEF 255
           NL  K A    +L  QE    +    +           I E +  L         A LEF
Sbjct: 96  NLSPKQAGQLEELLVQEGDAVRKGQAIARMDPDDIDNKIAETQAGLDSARVNMSRARLEF 155

Query: 256 ANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                                   E  +        +L    + R    I +P AG I  
Sbjct: 156 ERRESLHAAGALTTDEFLSFKAKYETARAELNAAEQRLEQKLQDRRDLLIKAPFAGVITN 215

Query: 303 NQSFSSSNYAQQSQPLMK--------IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
            +     +Y   +             IV  +    ++AKV    I  +K G  A +R   
Sbjct: 216 -RFADPGSYVTPTTAASASAGASSASIVQLASGLQVKAKVPESDIGRIKVGQRAKIRVDA 274

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           Y +     F A +  I P  ++++N++ T   +EV L++ D         LR G   +V 
Sbjct: 275 YPER---SFTARVSAISP-RAEKNNDVTT---FEVKLELQDPPAGL----LRIGMTTDVD 323

Query: 415 FTAKN 419
           F +  
Sbjct: 324 FDSGK 328



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 74/194 (38%), Gaps = 28/194 (14%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITW-----------SILL-----PIEISV 44
           M       L+  +        L  +I + GL+ W           +         ++  +
Sbjct: 24  MDPLKRSRLRHLNRRQWAAAGLAVLIAVSGLVIWRRSSAPGRDISAYTTTVETGQLDGVI 83

Query: 45  SSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++SGEI          SP  +G +++  V+ G  + +G  +   +  +  + I   +  +
Sbjct: 84  TASGEI--AAQRQVNLSPKQAGQLEELLVQEGDAVRKGQAIARMDPDDIDNKIAETQAGL 141

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            +    ++  ++ L+F   + + L  A     ++ L F  KY +  ++     +++  + 
Sbjct: 142 DS--ARVNMSRARLEF--ERRESLHAAGALTTDEFLSFKAKYETARAE-----LNAAEQR 192

Query: 164 LKMKLTRMRSIYLN 177
           L+ KL   R + + 
Sbjct: 193 LEQKLQDRRDLLIK 206


>gi|159184608|ref|NP_354111.2| secretion protein [Agrobacterium tumefaciens str. C58]
 gi|159139910|gb|AAK86896.2| secretion protein [Agrobacterium tumefaciens str. C58]
          Length = 355

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 58/414 (14%), Positives = 119/414 (28%), Gaps = 84/414 (20%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           + +     +  + LL  I  + L+ ++  L P   +V  +        V  +    SG +
Sbjct: 1   MLKKFFTPVSILVLLGGIAGVALVLYAWRLPPFLSTVEMTDNAFVRGYVTTMSPQVSGYV 60

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V++  ++ QGT L   +D          + ++   +  +D  +   +  N      
Sbjct: 61  VNVPVKDYQEVKQGTLLAKIDDRIYHQKQAQAEATLDTHKAALDNSRQQENAANANIRSS 120

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E A +S E  L           +++ +    ++ +S     +     +          S 
Sbjct: 121 EAAVDSAEASL---------KQAQLASDRQDNLIKSGVGTSSLQEEAHAALEKARASLSQ 171

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A L   ++DL  +                   IV +S+L+      E    L  I+  
Sbjct: 172 AKAALEVSRQDLQTI-------------------IVNRSSLQAAVANAEAAVELARIDLA 212

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E                                           +P+ G +      +
Sbjct: 213 NTEIR-----------------------------------------APVDGRLGEVGVRT 231

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Y      LM +VPH       A     Q+  ++ G   T+        +       +
Sbjct: 232 -GQYVTAGTQLMAVVPHDVWVI--ANFKETQLAGMQVGQPVTISVDALHRRK---LTGHV 285

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEV 413
           E+  P    +      +  T  + ++     ++I   A      EL  G    V
Sbjct: 286 ERFSPATGSEFAVIKPDNATGNFVKIAQRLGVRIVIDADQPLAAELSPGMSVVV 339


>gi|73541712|ref|YP_296232.1| secretion protein HlyD [Ralstonia eutropha JMP134]
 gi|72119125|gb|AAZ61388.1| Secretion protein HlyD [Ralstonia eutropha JMP134]
          Length = 429

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 89/300 (29%), Gaps = 32/300 (10%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           +  + + QL+                 +      L   +  +R++Y+N   L    +L  
Sbjct: 77  SIAADDTQLVTAGQPLIQLDRADTQVSLEQAEAMLAQAVREVRTLYVNNGSLAANVALRE 136

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A ++  + DL   + +    AVS                   E I   +  L+       
Sbjct: 137 ADVAKARDDLRRRQAIAGSGAVS------------------GEEISHAQTALQGAQSALL 178

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A  + A+      +   +         + L     +  +  + +P+ G +   +S    
Sbjct: 179 AAREQLASNKVLTDQTTVEKHPNVQRAAANLRSAYLSFARSALPAPVTGYVAK-RSVQVG 237

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  PLM IVP     ++ A     QI H++ G   T+    Y      K+   +  
Sbjct: 238 QRVAAGAPLMAIVPLD-QVWVDANFKEVQITHMRIGQPVTLEADVYGSKV--KYNGKVAG 294

Query: 370 ID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                       P  +   N ++  +   V + +      D+ + +       V    + 
Sbjct: 295 FSAGTGSAFSLLPAQNATGNWIKVVQRLPVRIALDPQQLKDHPLRVGLSMNVTVDVRHEE 354



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 62/185 (33%), Gaps = 10/185 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV++     G +     ++   +  G PL+  +  +T   ++  +  +      + 
Sbjct: 60  VAGNVVQVTPLVGGTVVSIAADDTQLVTAGQPLIQLDRADTQVSLEQAEAMLAQAVREVR 119

Query: 112 TE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           T        A +    + DV +   + R  Q +   G             +     +L  
Sbjct: 120 TLYVNNGSLAANVALREADVAKARDDLRRRQAIAGSGAVSGEEISHAQTALQGAQSALLA 179

Query: 167 KLTRMRS--IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
              ++ S  +  ++  +E   ++ RA  +     L+  ++         V++  +   +R
Sbjct: 180 AREQLASNKVLTDQTTVEKHPNVQRAAANLRSAYLSFARSALPAPVTGYVAKRSVQVGQR 239

Query: 222 IVYKS 226
           +   +
Sbjct: 240 VAAGA 244


>gi|145219527|ref|YP_001130236.1| RND family efflux transporter MFP subunit [Prosthecochloris
           vibrioformis DSM 265]
 gi|145205691|gb|ABP36734.1| efflux transporter, RND family, MFP subunit [Chlorobium
           phaeovibrioides DSM 265]
          Length = 404

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 26/220 (11%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE------ISRD 265
           SQ  LNQ        +LE R    +  +  R    LY+E  +   +YL            
Sbjct: 108 SQAQLNQAR----SQSLEARSRQFKADDDFRKAELLYEEKLISETDYLASKTNADAARAA 163

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKI 321
            + +    A   S L   +   ++  + +PI G+I+   S                +M++
Sbjct: 164 YQSSTYAIAQNKSLLEQNQDRLKKTVVRAPITGSIISLTSKLGERVVGTGQFPGTEVMRL 223

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDN 379
             +     +  +V    I +V  G   +V    Y       F   + +I    I +    
Sbjct: 224 A-NLDSMQVEVEVNENDIVNVHTGNPVSVTVDAYGSRI---FSGRVHEIANSAISTAAGT 279

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +   +  V ++I      ++   L+ G  A      + 
Sbjct: 280 QEEATNF-SVKIRI-----FNHQRLLKPGMSATADIETER 313



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 54/138 (39%), Gaps = 7/138 (5%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            V+++G+I  E +V  I    SG I +  V+ G  + +GT L   +     + ++  +  
Sbjct: 53  IVTATGKIQPETDV-AISPDVSGEIIELPVKEGQSVEKGTLLFKIQPDVYFNQVEQSQAQ 111

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   R      +S     ++ +   E  +E +     D+L       SK       + Y+
Sbjct: 112 LNQARSQSLEARSRQFKADDDFRKAELLYEEKLISETDYLA------SKTNADAARAAYQ 165

Query: 163 SLKMKLTRMRSIYLNRLD 180
           S    + + +S+     D
Sbjct: 166 SSTYAIAQNKSLLEQNQD 183


>gi|332184809|gb|AEE27063.1| RND efflux membrane fusion protein [Francisella cf. novicida 3523]
          Length = 356

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)

Query: 242 RHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +Y++A +E  NY +E+++   DL + +   A + S+L           + +P  G
Sbjct: 135 ASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL-----------VKAPADG 183

Query: 299 TIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT-------- 349
            IV  +         + +  L  IVP SK   +   V    +  VK G            
Sbjct: 184 VIVD-RIHGLGGVIVKDTDVLATIVPDSKSRIVELWVNSMDVPLVKIGDKVMLQFEGWPA 242

Query: 350 VRFPHYADIREKKFKAIIEKIDP 372
           V+F  +  +    F+  +  I P
Sbjct: 243 VQFSGWPQVAIGTFEGEVIFISP 265



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLK---KVS 102
            +   +    I +P  G + K+ V  G  + +G P++     +    + L + K   ++ 
Sbjct: 50  TLSPSERQQNISAPIGGRLGKWYVFEGDAVKKGDPIVEVLDLDPEVVSRLEEEKSAIELG 109

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I +++  I   K+ ++   +KY V + A   R  +        ++      N  ++ V  
Sbjct: 110 INSVKLAIKNTKNNIE--RHKYLVDKGASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKV 167

Query: 163 SLKMKLTRM 171
            +  + +R+
Sbjct: 168 QIARQQSRL 176


>gi|323967795|gb|EGB63207.1| efflux pump membrane protein [Escherichia coli M863]
 gi|327252010|gb|EGE63682.1| multidrug resistance protein K [Escherichia coli STEC_7v]
          Length = 387

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 83/232 (35%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K   LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSDRRKYFALLAVVLFIAFSGAYAYWSLELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNFVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|323941125|gb|EGB37311.1| efflux pump membrane protein [Escherichia coli E482]
          Length = 387

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFALLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.0 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|191173807|ref|ZP_03035329.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli F11]
 gi|190905955|gb|EDV65572.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli F11]
          Length = 387

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKEA 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVIE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 83/232 (35%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K   LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSDRRKYFALLAVVLFIAFSGVYAYWSMELKDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKEALEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVIEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|167038867|ref|YP_001661852.1| RND family efflux transporter MFP subunit [Thermoanaerobacter sp.
           X514]
 gi|300913546|ref|ZP_07130863.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter sp.
           X561]
 gi|307723439|ref|YP_003903190.1| efflux transporter RND family, MFP subunit [Thermoanaerobacter sp.
           X513]
 gi|166853107|gb|ABY91516.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter sp.
           X514]
 gi|300890231|gb|EFK85376.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter sp.
           X561]
 gi|307580500|gb|ADN53899.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter sp.
           X513]
          Length = 521

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 50/383 (13%), Positives = 122/383 (31%), Gaps = 36/383 (9%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I + V+ +G +    +V  I    SG +KK   + G  + +G  L   ED +  + ++
Sbjct: 42  GNISMEVTGTGNL--SGDVRAITLKGSGTVKKVYFKVGDTVKKGDLLYEIEDDDLNNQLE 99

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K+++   +  ++ EK   +    K  +   +    +  + +                 
Sbjct: 100 EAKLNLDLAQQQLNQEKQNYNNSLAKLSITAPSDGVVQVLVKEG------------QDVT 147

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
             +  ++    ++      N       S  + A ++   + + + +       V +  L 
Sbjct: 148 PGMPVAIIGDNSKENETAENNGQTTQNSVNVTAQIAGTVEKVYVSQG----QNVKKGQLL 203

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            +      S  +++    + K      N++  + +         I   +        D +
Sbjct: 204 IKLSSNNISDAQIKNAELKLKQAQNQYNQILQQIDN--LKIYSPIDGKILSQNINEGDIL 261

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
              ++           S  AG +        S Y  Q +  + IV  +    +   V   
Sbjct: 262 GT-SVASTNISNTNSQSQQAGFVPVLDITQLSTYESQPETAV-IV-GNSNYVVNLSVDET 318

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I+++K G  A +      ++  K F   + ++  + + Q+        Y V +++    
Sbjct: 319 DIKNIKVGQQAQL---TTDNLPGKTFTGTVSQVSQLPTIQNGVAS----YNVTIEVEPSE 371

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
                 +L  G    V  T    
Sbjct: 372 ------DLLLGMSMNVSITVAEK 388


>gi|91211711|ref|YP_541697.1| multidrug resistance protein K [Escherichia coli UTI89]
 gi|218690511|ref|YP_002398723.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli ED1a]
 gi|237704893|ref|ZP_04535374.1| multidrug resistance protein K [Escherichia sp. 3_2_53FAA]
 gi|91073285|gb|ABE08166.1| multidrug resistance protein K [Escherichia coli UTI89]
 gi|218428075|emb|CAR08993.2| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli ED1a]
 gi|222034106|emb|CAP76847.1| Multidrug resistance protein K [Escherichia coli LF82]
 gi|226901259|gb|EEH87518.1| multidrug resistance protein K [Escherichia sp. 3_2_53FAA]
 gi|294492071|gb|ADE90827.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli IHE3034]
 gi|307626055|gb|ADN70359.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli UM146]
 gi|312946969|gb|ADR27796.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli O83:H1 str. NRG
           857C]
 gi|323955872|gb|EGB51627.1| efflux pump membrane protein [Escherichia coli H263]
          Length = 387

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKEA 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVIE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 83/232 (35%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K   LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSDRRKYFALLAVVLFIAFSGAYAYWSMELKDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKEALEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVIEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|323936530|gb|EGB32818.1| efflux pump membrane protein [Escherichia coli E1520]
          Length = 387

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LVHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339


>gi|82778058|ref|YP_404407.1| multidrug resistance secretion protein [Shigella dysenteriae Sd197]
 gi|81242206|gb|ABB62916.1| multidrug resistance secretion protein [Shigella dysenteriae Sd197]
          Length = 390

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFDKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVLLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNSWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 316 VQRLPVRIELDQKQLEQYPLRI 337



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 67/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 32  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     D  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 85  EGDVLVTLDPTDARQAFDKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYN 144

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
              LL           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 145 RRVLLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 204

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 205 EVRNSWLALERT 216


>gi|13474034|ref|NP_105602.1| multidrug resistance efflux pump [Mesorhizobium loti MAFF303099]
 gi|14024786|dbj|BAB51388.1| multidrug resistance efflux pump [Mesorhizobium loti MAFF303099]
          Length = 395

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 50/367 (13%), Positives = 102/367 (27%), Gaps = 84/367 (22%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + + +V    Q+  G PLLT +D +        K+++      I T    LD ++ +
Sbjct: 99  SGYVDQVKVSENQQVKAGDPLLTIDDGDY-------KIAVAQAEAQIATLSKTLDRIDAQ 151

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               + +                               +  K +    ++   N    + 
Sbjct: 152 TKAAQASL------------------------------QQAKAQKVADQAAADNAARAQQ 181

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +++ L       Q  L   +   ++   +    + Q      +   L     E  + L  
Sbjct: 182 RAAQLVKTHVGTQAQLDDAQTALDQANAALVGADAQIAAAQANIGVLEAQRAESASTLAS 241

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +    D+A                                 +      + +P  G IV N
Sbjct: 242 LQLGRDKAA--------------------------------RDLSFTVLKAPYDG-IVGN 268

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +S    +     Q L  +VP     Y+ A     Q+  +  G    +             
Sbjct: 269 RSVEQGDLVSPGQKLAVVVPMD-KLYVVANFKETQLARLVPGEKVNISVDAIDGH---PI 324

Query: 364 KAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +  +  + P           +      T+    V ++I   A +    +LR G    V+ 
Sbjct: 325 QGTVSSLAPASGAVFSLLPPENATGNFTKVVQRVPVRIDVPADALKTGKLRAGL--SVVV 382

Query: 416 TAKNTTL 422
              + T 
Sbjct: 383 NVDSRTA 389


>gi|319956300|ref|YP_004167563.1| efflux transporter, rnd family, mfp subunit [Nitratifractor
           salsuginis DSM 16511]
 gi|319418704|gb|ADV45814.1| efflux transporter, RND family, MFP subunit [Nitratifractor
           salsuginis DSM 16511]
          Length = 380

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 82/284 (28%), Gaps = 47/284 (16%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L   G+       +       +   +      ++S+  N          L+A L   Q
Sbjct: 74  AVLKDQGETVRQGELIARIDPVDLPDQIAQARAHLQSLRFNLQAARKDLESLKAQLKLAQ 133

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                 + L  K    +++ ++ +  +     ++     E + +         EA L   
Sbjct: 134 IVFARYQKLSPKGYAPESEYDKAQANLRSVQAQIAAKEAEIEALKAQ----ESEARLNI- 188

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                     L+K   +  I +P+ G +V+ +    S      Q
Sbjct: 189 ------------------------DALQKRLSRFEIHAPVNGLVVH-RDAQPSQTVAPQQ 223

Query: 317 PLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           P++ IV P     ++ A +     Q ++ G  +T+R               + +I+P   
Sbjct: 224 PILTIVRPRD--VWVSATIDEALSQKLRPGEPSTIRL---RSRPGAPLAGKVARIEPQSD 278

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                           +I ++AF            AEV      
Sbjct: 279 PVTEE-----------RIVEVAFDKLPRPFYLKEQAEVTIQTGK 311



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 47/133 (35%), Gaps = 2/133 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +     + G  + QG  +   + ++  D I   +  +++LR ++   +  L+ L  +
Sbjct: 69  GGKLLAVLKDQGETVRQGELIARIDPVDLPDQIAQARAHLQSLRFNLQAARKDLESLKAQ 128

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             + +  F     Q L   G    +        + SV   +  K   + ++     +   
Sbjct: 129 LKLAQIVFA--RYQKLSPKGYAPESEYDKAQANLRSVQAQIAAKEAEIEALKAQESEARL 186

Query: 184 KSSLLRALLSSHQ 196
               L+  LS  +
Sbjct: 187 NIDALQKRLSRFE 199


>gi|297520788|ref|ZP_06939174.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli OP50]
          Length = 372

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 78  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 137

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 138 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 179

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 180 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 237

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 238 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 295

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 296 RVPVEVSLDPKELMEHPLRIGLSMTATID 324



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/218 (11%), Positives = 79/218 (36%), Gaps = 11/218 (5%)

Query: 22  LLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           LL+++  I     ++        + S+ +     N   I +  SG +     ++ + + Q
Sbjct: 4   LLAVVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQ 63

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           G  L++ +  + T  ++  K ++ N+     + ++  ++ + +  + +    +   +   
Sbjct: 64  GDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNR 123

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRLDLENKSSLLRALLS 193
              L   G       +     + S   +L   +   ++    +    L  +  ++ A  +
Sbjct: 124 RVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADA 183

Query: 194 SHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
           + +  L + +   +      ++Q  +   E +    +L
Sbjct: 184 TKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 221


>gi|241668202|ref|ZP_04755780.1| membrane fusion protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876737|ref|ZP_05249447.1| HlyD family secretion protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842758|gb|EET21172.1| HlyD family secretion protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 346

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 83/255 (32%), Gaps = 19/255 (7%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL- 230
           +   L   +   K    +  L+  Q+ +    ++ + N             +    ++L 
Sbjct: 101 KDYQLQVANANAKIIQAKGQLAVAQEQV----SVAKSNLTKAQSSLDTATSMADRYIKLY 156

Query: 231 RENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +E+    ++  ++IN+     +A  E  + LK+    +E  +                  
Sbjct: 157 KEDAGSLQDAQKYINQKIQAEKAKDEAYSSLKQALVQVEIAKAQVGATKVGYDNASLNLS 216

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             T+++P  G +   + +         QPL   +  +K  +I A      +  +K G + 
Sbjct: 217 YTTLIAPDDGYVSNLKIY-KGQLVSTGQPLFGFI-DNKTWWIDANFKETDLDRIKPGQSV 274

Query: 349 TVRFPHYADIREKKFK------AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
            +    Y+                +  + P  +   N ++  + + V + +     +D  
Sbjct: 275 KIELDMYSHTYTGTVNSISYATGSVFSLLPPENATGNWVKVTQRFPVKIVL----KNDPK 330

Query: 403 IELRNGFPAEVLFTA 417
             LR G  A V    
Sbjct: 331 YPLRVGASATVKVDT 345



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/167 (8%), Positives = 52/167 (31%), Gaps = 6/167 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+ I     G I+K  V+N   + +G  L+  +  +    +      I   +  + 
Sbjct: 63  VNADVINISPKVGGYIEKVYVQNNQYVHKGDKLVQIDPKDYQLQVANANAKIIQAKGQLA 122

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC-----SKVFNYGISSVYRSLKM 166
             +  +    +     + + ++       ++  Y         ++ +        ++   
Sbjct: 123 VAQEQVSVAKSNLTKAQSSLDTATSMADRYIKLYKEDAGSLQDAQKYINQKIQAEKAKDE 182

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVS 212
             + ++   +     + +    +    +   +L+    +  +   VS
Sbjct: 183 AYSSLKQALVQVEIAKAQVGATKVGYDNASLNLSYTTLIAPDDGYVS 229


>gi|28870903|ref|NP_793522.1| multidrug resistance protein [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28854152|gb|AAO57217.1| multidrug resistance protein [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 402

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 89/259 (34%), Gaps = 32/259 (12%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + S   +L   + ++R +Y N   ++ + +  R  + + Q + +  ++L    A+SQ +L
Sbjct: 104 LQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRTAVQTAQDNYSRRRSLAAGGAISQEEL 163

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           +     +  +    +  ++  +  L     L D+  +     +K  +  L Q     A  
Sbjct: 164 SHARDSLTSA----QSALNNIQQQLSTSVALVDDTVVSSHPDVKAAAAQLRQAFLANA-- 217

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                       + T+++P+ G +   +S       Q     M ++P     +I A    
Sbjct: 218 ------------RSTLVAPVTGYVAK-RSVQLGQRIQPGTATMAVIPLD-QLWIDANFKE 263

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----------EY 386
            Q+  ++ G    +    Y      K+   I+ +          L  Q          + 
Sbjct: 264 TQLGKMRIGQPVEISSDLYGSDV--KYSGTIDSLGAGTGSAFALLPAQNATGNWIKIVQR 321

Query: 387 YEVILKITDLAFSDNNIEL 405
             V + I     + + + +
Sbjct: 322 VPVRVHINPEELAQHPLRI 340



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 50/142 (35%), Gaps = 9/142 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVVEI    +G +     ++G  + +G  LL F+  +    +   + ++  +   + 
Sbjct: 60  VNGNVVEITPLVTGTVISIGADDGDLVHEGQVLLQFDPSDAAVSLQSAEANLGKVVRQVR 119

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              S +D +  +      A ++          + + +  +    G +     L      +
Sbjct: 120 GLYSNVDGMKAQLAAQRTAVQT---------AQDNYSRRRSLAAGGAISQEELSHARDSL 170

Query: 172 RSIYLNRLDLENKSSLLRALLS 193
            S      +++ + S   AL+ 
Sbjct: 171 TSAQSALNNIQQQLSTSVALVD 192


>gi|331018321|gb|EGH98377.1| multidrug resistance protein [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 402

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 89/259 (34%), Gaps = 32/259 (12%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + S   +L   + ++R +Y N   ++ + +  R  + + Q + +  ++L    A+SQ +L
Sbjct: 104 LQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRTAVQTAQDNYSRRRSLAAGGAISQEEL 163

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           +     +  +    +  ++  +  L     L D+  +     +K  +  L Q     A  
Sbjct: 164 SHARDSLTSA----QSALNNIQQQLSTSVALVDDTVVSSHPDVKAAAAQLRQAFLANA-- 217

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                       + T+++P+ G +   +S       Q     M ++P     +I A    
Sbjct: 218 ------------RSTLVAPVTGYVAK-RSVQLGQRIQPGTATMAVIPLD-QLWIDANFKE 263

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----------EY 386
            Q+  ++ G    +    Y      K+   I+ +          L  Q          + 
Sbjct: 264 TQLGKMRIGQPVEISSDLYGSDV--KYSGTIDSLGAGTGSAFALLPAQNATGNWIKIVQR 321

Query: 387 YEVILKITDLAFSDNNIEL 405
             V + I     + + + +
Sbjct: 322 VPVRVHINPEELAQHPLRI 340



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 50/142 (35%), Gaps = 9/142 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVVEI    +G +     ++G  + +G  LL F+  +    +   + ++  +   + 
Sbjct: 60  VNGNVVEITPLVTGTVISIGADDGDLVHEGQVLLQFDPSDAAVSLQSAEANLGKVVRQVR 119

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              S +D +  +      A ++          + + +  +    G +     L      +
Sbjct: 120 GLYSNVDGMKAQLAAQRTAVQT---------AQDNYSRRRSLAAGGAISQEELSHARDSL 170

Query: 172 RSIYLNRLDLENKSSLLRALLS 193
            S      +++ + S   AL+ 
Sbjct: 171 TSAQSALNNIQQQLSTSVALVD 192


>gi|37522064|ref|NP_925441.1| HlyD family secretion protein [Gloeobacter violaceus PCC 7421]
 gi|35213063|dbj|BAC90436.1| HlyD family secretion protein [Gloeobacter violaceus PCC 7421]
          Length = 433

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 89/302 (29%), Gaps = 46/302 (15%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           +   +  +A   R +Q+L   G        +       +   L     R+ S  +     
Sbjct: 109 DPLAIGAEASGLRIDQVLVEEGDRVRRGQTLVVLNDDILRAQLSQAEARLASARVTVSQR 168

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
               +  +A  +  + +L   ++L ++ A+S  ++  +E +   +  +L +      +  
Sbjct: 169 RAALAKAQATANEARANLQRYQSLGKQGAISSQEVLARETLGQGAQADLDQAQLAITSAE 228

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                                     +NQ   A   ++L        Q  IL+P  G + 
Sbjct: 229 ASAQ----------------------ENQAQIAQLRAQLA-------QTRILAPDDGLVA 259

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +           + L  +V       +RA+V    +  V  G +  V        R+ 
Sbjct: 260 K-RDARLGEIVSSGKVLFTLV-RDNRLELRAQVPEMDLPKVTAGQSVLVTSDA---DRQI 314

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                + +I P I ++           V + +  ++       LR G          +  
Sbjct: 315 VVTGRVRQITPQIDERTRLG------VVRIDVPSVS------GLRPGMFVRGQVRLGSQK 362

Query: 422 LA 423
             
Sbjct: 363 AL 364



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 58/176 (32%), Gaps = 7/176 (3%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I +  VE G ++ +G  L+   D      +   +  + + R  +   ++AL       +
Sbjct: 121 RIDQVLVEEGDRVRRGQTLVVLNDDILRAQLSQAEARLASARVTVSQRRAALAKAQATAN 180

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             E     +  Q L   G   S                L      + S   +  + + + 
Sbjct: 181 --EARANLQRYQSLGKQGAISSQEVLARETLGQGAQADLDQAQLAITSAEASAQENQAQI 238

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER----IVYKSTLELRENIHEQ 237
           + LRA L+   + L     L  K      ++    +    +V  + LELR  + E 
Sbjct: 239 AQLRAQLAQT-RILAPDDGLVAKRDARLGEIVSSGKVLFTLVRDNRLELRAQVPEM 293


>gi|32475821|ref|NP_868815.1| copper efflux system protein cusB (precursor) [Rhodopirellula
           baltica SH 1]
 gi|32446364|emb|CAD76192.1| probable copper efflux system protein cusB (Precursor)
           [Rhodopirellula baltica SH 1]
          Length = 376

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/347 (12%), Positives = 106/347 (30%), Gaps = 41/347 (11%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K  V  G  +  G  L + +D+  +      +  +  ++   D        L    
Sbjct: 58  GRLVKIHVTEGDAVDLGELLASLDDVVASLQHQSAEQDLAIIQFQSDQTLDLDAALAFLE 117

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +    A E      +      +    +      +         +   +       D  ++
Sbjct: 118 EQKSAAREHDAGAAIQKRLAENDIRVQAAQKAEAVAKSEWTRAVNAKKDFD----DAVSQ 173

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           S + +  L+  Q+ L   + +FE+                 + LE   +     ++   I
Sbjct: 174 SEIDQFRLAYEQRSLETQQAIFEQ---------------ENARLEQSVDQATAASLQTKI 218

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                    + A    + + ++ Q ++   ++  +L +     EQ ++ SPI G +V   
Sbjct: 219 RSA------DVAVRQAKAAANVVQLKKKLKEQ--QLELARVNVEQHSLKSPIDGIVVEV- 269

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           S    ++ Q  + + ++V       +   +  K I  ++      +     A     +  
Sbjct: 270 SHRVGDWVQPGESIARVV-RLDRLRVEGYLPAKWIHWLRDESEPKL-IVELATGETTERT 327

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              + I P +       +             +   + + +L  G PA
Sbjct: 328 GEAKFISPEVDPLTRETRFW-----------IEVDNADGKLLPGSPA 363


>gi|311280076|ref|YP_003942307.1| secretion protein HlyD family protein [Enterobacter cloacae SCF1]
 gi|308749271|gb|ADO49023.1| secretion protein HlyD family protein [Enterobacter cloacae SCF1]
          Length = 355

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 83/296 (28%), Gaps = 19/296 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F  + E L     +  +   +     I     ++      +          +   
Sbjct: 63  VSEGQFVRQGEALAHMDTRVLNEQRQEAAAQIKEAQSAVAAAHALLAQRQSEMRAAQAIV 122

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              +A L +  K  T    L ++ AVS   L+        +   L     +       I 
Sbjct: 123 RQRQAELDASAKRHTRSSTLSQRGAVSAQQLDDDRAAAQSAQAALESAKAQVSASQAAIE 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                 Q +   A+   +  + +   +  T+ +P  G I Y + 
Sbjct: 183 AARTSIIQ-------------AQTRVDAAEATERRIVAD--IDDSTLKAPRDGRIQY-RV 226

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +Q   +  G  A +       +      +
Sbjct: 227 AEPGEVLSAGGRVLNMVDLSD-VYMTFFLPTEQAGLLALGSEARIVLDAAPSLVVPANVS 285

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +  +     +  + N+ + +  + V ++I       +   ++ G P        +
Sbjct: 286 FVASVAQFTPKTVETNDERLKLMFRVKVRIPPALLQKHLEYVKTGLPGMAYVRLDS 341



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 70/209 (33%), Gaps = 8/209 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLP-IEISVSSS-GEILNEDNVVEIKSPFSGII 67
           KR          +L +IGIIG   W    P +    + S G I   +  ++I +  +G I
Sbjct: 3   KRKRHLVWSLAAVLVVIGIIGW--WLTRSPGLPEGFAGSNGRIEATE--IDIATKIAGRI 58

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V  G  + QG  L   +     +        IK  +  +    + L    ++    
Sbjct: 59  DSILVSEGQFVRQGEALAHMDTRVLNEQRQEAAAQIKEAQSAVAAAHALLAQRQSEMRAA 118

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +     R+ +L     ++  T S   +   +   + L       +S        + + S 
Sbjct: 119 QAIVRQRQAELDASAKRH--TRSSTLSQRGAVSAQQLDDDRAAAQSAQAALESAKAQVSA 176

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +A + + +  +   +   +    ++  +
Sbjct: 177 SQAAIEAARTSIIQAQTRVDAAEATERRI 205


>gi|309789520|ref|ZP_07684103.1| hypothetical protein OSCT_0054 [Oscillochloris trichoides DG6]
 gi|308228486|gb|EFO82131.1| hypothetical protein OSCT_0054 [Oscillochloris trichoides DG6]
          Length = 530

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 59/418 (14%), Positives = 117/418 (27%), Gaps = 58/418 (13%)

Query: 53  EDNVVEIKSP----FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN--- 105
              V  ++ P      GII+K  V  G  I QG  +      +    +   K+++     
Sbjct: 72  TGQVSAVQYPMTFTQDGIIEKIFVRPGQIIKQGDLIAQLNIEDLQAQLTDAKLNLAQAQR 131

Query: 106 -------------LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--- 149
                         +  +  E +  D    K           +  + +      +T    
Sbjct: 132 TITQATQAGQLEVRQAELLVEAAQQDLAQAKQPPTALVVAQAQTAVREAQANLDTTKNNY 191

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S+  N   S + R++    T           L+         L +   DL   + + E  
Sbjct: 192 SQAKNQAKSDMERAVANLQTIQEQYGAAVTQLQKAKGDEAKELQAKVDDLK--RQMAEAE 249

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY----DEANLEFANYLKEISRD 265
           A     +   +         + +   +       +N++          E    ++     
Sbjct: 250 AAVATAVINYDTARNNEVAAVSDAEAKLDLARAQLNDVLKGPDQFVIAEKERAVRSAEIA 309

Query: 266 LEQNQRTFA----------DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           L Q ++                +++  +E+    + + +PI+G IV     S     Q  
Sbjct: 310 LAQARQRIQVDPALTTSVESFRNQIKNIEEQIAARQLTAPISGEIVEINV-SVGEPVQVG 368

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQ------HVKKGYTATVRFPHYADIREKKFKAIIEK 369
            P++ I        I A+ +                 T T+ F  Y     K F+  I  
Sbjct: 369 MPVITIF-DESRLEIMAETSDMLTDGRTSLPQFNPRQTITITFDRYP---GKSFEGSISL 424

Query: 370 ID-PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
              P I  +         Y  +      +F+  +I       AE+       T A  +
Sbjct: 425 APVPSIDLELEGETPTGTYHFVFDTQGQSFASGDI-------AEISILLSRRTNALYL 475


>gi|323169012|gb|EFZ54690.1| multidrug resistance protein K [Shigella sonnei 53G]
          Length = 346

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 62/215 (28%), Gaps = 22/215 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 52  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 111

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 112 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 153

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 154 AADATKEAWLALKRTDIRSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 211

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q+  V+ G +  +    Y +     F   +  I
Sbjct: 212 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGI 244


>gi|148256869|ref|YP_001241454.1| HlyD family multidrug resistance protein protein [Bradyrhizobium
           sp. BTAi1]
 gi|146409042|gb|ABQ37548.1| putative Multidrug resistance protein (hlyD family), emrA-like
           protein [Bradyrhizobium sp. BTAi1]
          Length = 346

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 93/257 (36%), Gaps = 16/257 (6%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---NLFEKNAVSQNDLNQQ 219
           +L     ++RS      +++ + ++ +A + + Q  +   +      E+ A    DL + 
Sbjct: 78  ALAQAEAQVRSAEAAIHNIDAQIAVQQAQIRAGQAQVEQAQAALTFAEQQAKRYQDLART 137

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-ISRDLEQNQRTFADEMS 278
                +S  +    + +QK  L        +ANL+ A    E ++   E      A   +
Sbjct: 138 GSGTVQSEQQYTSQLEQQKAALTSA-----QANLQVAQRQLESLNAQRESADANLAQVQA 192

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +    +      T+ +   G IV   + +   +A Q   L   VP     ++ A     Q
Sbjct: 193 QRDQAQLNLSYTTVTAAQPGRIVNLSA-ADGQFAAQGTALSMFVPDD--VWVTANFKETQ 249

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKID-PIISQQDNNLQTQEYYEVILKIT--- 394
           +  ++ G   T++   Y +   +   A ++    P  S       T  Y +++ ++    
Sbjct: 250 LDQMRPGQPVTLQIDAYPEREIRGHVASVQSGSGPAFSLLPPQNATGNYVKIVQRVPVKI 309

Query: 395 DLAFSDNNIELRNGFPA 411
           ++     ++ L  G   
Sbjct: 310 EMDDPPADVALGPGMSV 326



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/191 (10%), Positives = 56/191 (29%), Gaps = 10/191 (5%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I    V +   +  G  +   ++ +    +   +  +++    I          N  
Sbjct: 47  SGYITSVPVTDNQHVRAGDVIARIDERDYRTALAQAEAQVRSAEAAIH---------NID 97

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +  +  + R  Q      +   T ++        + R+    +   +         + 
Sbjct: 98  AQIAVQQAQIRAGQAQVEQAQAALTFAEQQAKRYQDLARTGSGTVQSEQQYTSQLEQQKA 157

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +  +A L   Q+ L  +    E    +   + Q +R   +  L        Q   + +
Sbjct: 158 ALTSAQANLQVAQRQLESLNAQRESADANLAQV-QAQRDQAQLNLSYTTVTAAQPGRIVN 216

Query: 244 INELYDEANLE 254
           ++    +   +
Sbjct: 217 LSAADGQFAAQ 227


>gi|153824797|ref|ZP_01977464.1| membrane-fusion protein [Vibrio cholerae MZO-2]
 gi|149741515|gb|EDM55545.1| membrane-fusion protein [Vibrio cholerae MZO-2]
          Length = 377

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +   
Sbjct: 43  IEKQAVAVGQIMPS-HSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDA 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              +     +++++   L  L    K  ++   ++       D   K      K  N  +
Sbjct: 102 STELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLEL 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMKNLFEK 208
                +   +     ++Y               E   S   +  ++    L  MKN+  K
Sbjct: 162 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFK 221

Query: 209 NAVSQNDLNQQERIVYKS 226
            +VS++D  Q    +  S
Sbjct: 222 GSVSEHDAAQLNAGMPAS 239



 Score = 43.1 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 87/225 (38%), Gaps = 35/225 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  ++    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 98  LTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQ 157

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM---------KIV 322
                 S    + + +   T+ +PI+GTI+  +        +  +P++         +++
Sbjct: 158 NLELIRSGEASIGQAKLSSTLYAPISGTILNIK-------VEVGEPIISTESSQAATEMI 210

Query: 323 PHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + +     +  V+      +  G  A++    Y    E+     + K+  I S++ NN
Sbjct: 211 QLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP---EQVINGQLTKV-AIQSERLNN 266

Query: 381 LQ---TQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +    + +   ++V +   D+     N+ LR+GF A    T + 
Sbjct: 267 PENKDGKSFDNGFQVEIGQLDI---PENMTLRSGFSASAKITLQR 308


>gi|239816463|ref|YP_002945373.1| secretion protein HlyD family protein [Variovorax paradoxus S110]
 gi|239803040|gb|ACS20107.1| secretion protein HlyD family protein [Variovorax paradoxus S110]
          Length = 448

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 78/262 (29%), Gaps = 21/262 (8%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           R ++       S+       +      ++ ++  Q DL   + L    AVS+ +LN  E 
Sbjct: 120 RQVRTLYANNGSLAAQITLRQADIVKAQSDIAKAQDDLQRRRALSGNGAVSKEELNHAET 179

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +  +  +L             +                     + Q+    A   +K+ 
Sbjct: 180 ALDNAKSQLAAAQAGVVAAREALASNQSLTE----------GTSVAQHPSVLAAA-AKVR 228

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  + +P+ G +   ++           P+M IVP +   ++ A     Q+++
Sbjct: 229 EAYLATQRVALPAPVDGYVAK-RTVQLGQRVAAGTPMMSIVPLN-QLWVDANFKEVQLRN 286

Query: 342 VKKGYTATVRFPHYADIR--EKKFKAI-IEKIDPIISQQDNNLQTQ-----EYYEVILKI 393
           ++      +R   Y        K   + +            N         +   V + +
Sbjct: 287 IRIDQPVKLRADVYGKKVEYTGKVAGLGVGTGSAFALLPAQNATGNWIKVVQRVPVRIAL 346

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
                  N + +     AE+  
Sbjct: 347 DPEQLKANPLRIGLSMDAEIDI 368



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 46/146 (31%), Gaps = 2/146 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + NV++I     G +     ++   +  G PL+  +  +    ++  + ++      + 
Sbjct: 64  VQGNVIQITPQIGGTVMAINADDTDFVKAGQPLVQLDPADAKVALEQAEAALAQAVRQVR 123

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T  +    L  +  + +      +  +           +   N  +S     L    T +
Sbjct: 124 TLYANNGSLAAQITLRQADIVKAQSDIAKAQDDLQRRRALSGNGAVS--KEELNHAETAL 181

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQK 197
            +        +      R  L+S+Q 
Sbjct: 182 DNAKSQLAAAQAGVVAAREALASNQS 207


>gi|218559323|ref|YP_002392236.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli S88]
 gi|218366092|emb|CAR03837.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein component [Escherichia coli S88]
          Length = 387

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKEA 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVIE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           NL + H    K   LL+++  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NLNKKHSDRRKYFALLAVVLFIAFSGAYAYWSMELKDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKEALEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVIEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|195978626|ref|YP_002123870.1| peptide ABC transporter BlpC/ComB-like [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195975331|gb|ACG62857.1| peptide ABC transporter BlpC/ComB-like [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 466

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 57/413 (13%), Positives = 130/413 (31%), Gaps = 30/413 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S     EI+V+S GEI     +  ++S  +  I    + N   I QG  ++ +       
Sbjct: 52  SCFAYKEITVTSYGEITPTQVIATVQSISNNPIIANHLTNNQPIKQGDSIIQYAKDLEEA 111

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-----------FESREEQLLDFLG 143
              + +  +        +  + L  L    ++ +             F S+ + +     
Sbjct: 112 QKQVLEKQLATYEKQKSSLNTLLLSLKQGQNLFQSDDQFGYVNTFNHFMSQAQDIDLGFS 171

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           K  +  S+       S+   +  ++  +     +  +L          LSS+      + 
Sbjct: 172 KIKAETSQQAQLIQDSIVA-INQQINGISQQIADYEELRAAVINQSDSLSSNNPHQATLD 230

Query: 204 N-LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-------NELYDEANLEF 255
             L +     +   NQ    + +S L L+ ++        ++       N L  +  +  
Sbjct: 231 AYLSQSQTSQETATNQLLFQIDQSLLSLKASMDSLNRQRANLHQSTSYDNSLNTKLEILR 290

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             +L   S+ L        +  ++L           I +P +G +  N +F         
Sbjct: 291 TQFLITASQQLTDVNHHITELKAQLEQATLQVNNLVIKAPKSGIVQLNSAFEGKTSIPIG 350

Query: 316 QPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             +  I P    +K   +   V+ + +  +KK     +    + +         I+ ID 
Sbjct: 351 HDIAYIYPSLKQTKQALLTYYVSSESVSLLKKNQIVRLALDRHGNQPI-VITGTIKTIDE 409

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           + ++          ++V  K+T       +  ++ G    V+      T    
Sbjct: 410 LATKTKQGNL----FKVTAKLT--LSEKESTTIQYGQQGRVISVIAKKTFFDF 456


>gi|113868272|ref|YP_726761.1| multidrug efflux membrane fusion protein [Ralstonia eutropha H16]
 gi|113527048|emb|CAJ93393.1| multidrug efflux membrane fusion protein [Ralstonia eutropha H16]
          Length = 418

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 92/300 (30%), Gaps = 32/300 (10%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           +  + + QL+                 +      L   +  +R++Y+N   L    +L  
Sbjct: 84  SISADDTQLVTAGQPLIQLDRADSQVALEQAEAQLAQAVREVRTLYVNNGSLAANVALRE 143

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A ++  + DL   + +    AVS                   E I   ++ L+       
Sbjct: 144 ADVAKARDDLRRRQAIAGSGAVS------------------NEEISHAQSALKGAESALL 185

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A  + A+      +   +         + L     +  +  + +P+ G +   +S    
Sbjct: 186 AAREQLASNKVLTDQTTVEKHPNVQRAAASLRSAYLSFARSAMPAPVTGYVAK-RSVQVG 244

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  PLM +VP     ++ A     QI H++ G   T+    Y      +++  +  
Sbjct: 245 QRVAAGAPLMAVVPLD-QVWVDANFKEVQITHMRIGQPVTLEADVYGSKV--EYQGKVAG 301

Query: 370 ID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                       P  +   N ++  +   V + +      D+ + +      +V    + 
Sbjct: 302 FSAGTGSAFSLLPAQNATGNWIKVVQRLPVRIALDPQQLKDHPLRVGLSMTVKVDVRREE 361



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 63/185 (34%), Gaps = 10/185 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV++     G +     ++   +  G PL+  +  ++   ++  +  +      + 
Sbjct: 67  VAGNVVQVTPLVGGTVVSISADDTQLVTAGQPLIQLDRADSQVALEQAEAQLAQAVREVR 126

Query: 112 TE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           T        A +    + DV +   + R  Q +   G   +         +     +L  
Sbjct: 127 TLYVNNGSLAANVALREADVAKARDDLRRRQAIAGSGAVSNEEISHAQSALKGAESALLA 186

Query: 167 KLTRMRS--IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
              ++ S  +  ++  +E   ++ RA  S     L+  ++         V++  +   +R
Sbjct: 187 AREQLASNKVLTDQTTVEKHPNVQRAAASLRSAYLSFARSAMPAPVTGYVAKRSVQVGQR 246

Query: 222 IVYKS 226
           +   +
Sbjct: 247 VAAGA 251


>gi|254425197|ref|ZP_05038915.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
 gi|196192686|gb|EDX87650.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
          Length = 452

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 64/242 (26%), Gaps = 27/242 (11%)

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                  S+      ++   S+    +   +          + + L A L     D    
Sbjct: 108 APIMQLSSQRSQSDYNAALASVSAARSSRDTARAQLRAARARQTELLADLELRNNDYDRT 167

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             L  + A+ QN L++  R    +   L  +  E   +                      
Sbjct: 168 AALVAQGALPQNQLDEVVRDRTVAESALASSREEIAALEAS------------------- 208

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              L   + T     +     ++    KT+ +PIAG +         +Y Q    L  I 
Sbjct: 209 ---LTGAEATLEQANANAAATQQDLLDKTVTAPIAGIVGDIPVN-LGDYVQAGDQLATIT 264

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
             ++   +   +   +   ++ G    +      D         I  I P        + 
Sbjct: 265 -QNQDLDLEIAIPINEADRLRTGLPVELSLFGSDDTIA---TGAINFISPTTDTDTQTVL 320

Query: 383 TQ 384
            +
Sbjct: 321 AE 322



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 46/150 (30%), Gaps = 3/150 (2%)

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           +    G I +  V++G+ +  G P++      +    +    S+   R   DT ++ L  
Sbjct: 86  QPEADGRIVQIFVDSGNTVAAGAPIMQLSSQRSQSDYNAALASVSAARSSRDTARAQLRA 145

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              +   L    E R                 +    +  V R   +  + + S      
Sbjct: 146 ARARQTELLADLELRNNDY--DRTAALVAQGALPQNQLDEVVRDRTVAESALASSREEIA 203

Query: 180 DLENKSSLLRALLSSHQKDLTMMKN-LFEK 208
            LE   +   A L     +    +  L +K
Sbjct: 204 ALEASLTGAEATLEQANANAAATQQDLLDK 233


>gi|148253371|ref|YP_001237956.1| putative efflux transporter [Bradyrhizobium sp. BTAi1]
 gi|146405544|gb|ABQ34050.1| Putative efflux transporter [Bradyrhizobium sp. BTAi1]
          Length = 421

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 88/254 (34%), Gaps = 27/254 (10%)

Query: 19  RMTLLSIIGIIGLITW----SILLP-----------IEISVSSSGEILNEDNVVEIKSPF 63
           R  +L+++ ++G   W    ++L P           +  +V +SG +      VEI S  
Sbjct: 27  RWFVLAVMLLLGFGGWQSVRAVLGPAVVVDLVRRGDLVETVVASGHVETP-YRVEIGSQI 85

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           +G +    V+ G ++ +G PL++ E  E    +   + ++      +  + + L   + K
Sbjct: 86  TGTVDDVLVQEGQRVTKGQPLISLEARELKAAVLQAQGAVAQAEARM-RQLAELTLPSAK 144

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN------ 177
             + +        Q         ++        +    ++L + L + R+          
Sbjct: 145 EALRQAQATLLNAQQTYDRTSQLASNGYATRAALDEAQKTLDVALAQKRAAEFQVFTASP 204

Query: 178 ----RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                +  E + +  RA L + Q  L     L  ++ V      ++  +       L   
Sbjct: 205 GGSDSVMAETQLNQARANLDTAQSRLGYATILAPRDGVLITRNVEKGAVAQPGKALLVLA 264

Query: 234 IHEQKNMLRHINEL 247
                 ++  I+E 
Sbjct: 265 PAGDVQLVLQIDER 278



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 87/288 (30%), Gaps = 36/288 (12%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI-YLNRLDLENKSSLLRALL 192
           +E Q +       S  ++     +     ++     RMR +  L     +      +A L
Sbjct: 95  QEGQRVTKGQPLISLEARELKAAVLQAQGAVAQAEARMRQLAELTLPSAKEALRQAQATL 154

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            + Q+       L      ++  L++ ++ +  +  + R    +                
Sbjct: 155 LNAQQTYDRTSQLASNGYATRAALDEAQKTLDVALAQKRAAEFQVFTASPG--------- 205

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                       D    +       + L   +      TIL+P  G ++  ++      A
Sbjct: 206 ----------GSDSVMAETQLNQARANLDTAQSRLGYATILAPRDG-VLITRNVEKGAVA 254

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           Q  + L+ + P   +  +  ++  + +  +  G TA      Y D R   F A++  I+P
Sbjct: 255 QPGKALLVLAPAGDVQLV-LQIDERNLGKLALGQTALASADAYPDRR---FAAVVSYINP 310

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +     ++Q     ++ +K        +           V       
Sbjct: 311 GVDISRASVQV----KLTVKDPPDYLRQD-------MTVSVDIEVAAR 347


>gi|86360636|ref|YP_472524.1| hypothetical protein RHE_PE00362 [Rhizobium etli CFN 42]
 gi|86284738|gb|ABC93797.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 410

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/347 (14%), Positives = 119/347 (34%), Gaps = 17/347 (4%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            + +P  G+I +  ++ GS +  G  L    +          +  + +L    +T    +
Sbjct: 44  VVNAPIDGMIAEEPLKAGSPVKAGQALAEIRNTRVN------RAILASLEADRNTALDRV 97

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             L  + + L    E    +L  +     +   +        V  S    L     +   
Sbjct: 98  AALKKEREELSALREELSARLEVYKQTTIANLEREVEILRKKVEVSQAQDLVAQVDL-SR 156

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R+ LE+K  L + L+ + +          E + ++ + L Q+   V +      +  ++ 
Sbjct: 157 RVQLESKGILTQKLVEAARAAGAATGGEVEISNLTVDQLEQRLNAVRQGIFVFGDGQNDV 216

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +  +E+    N +  + + E      + Q+    E  +++ LE      T L+P  
Sbjct: 217 PYSRQREDEVVVRIN-DLNSRIAENETRATEVQKQLVKEAERVSSLESA----TALAPFD 271

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +      S SN    +  LM+++   +  ++   V       +  G  A VR    +D
Sbjct: 272 GVVWTRSIVSGSNVVL-NDELMRLL-DCRELFVDILVPEVNYDEIYPGLVAQVRLFGRSD 329

Query: 358 IREKK---FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           + +      +     ++           TQ    + +++     +++
Sbjct: 330 VFKGTVISVRGNSASVETDSFAASLPPSTQRNARIRVRLDPSFMNND 376


>gi|89069282|ref|ZP_01156645.1| GAF domain protein [Oceanicola granulosus HTCC2516]
 gi|89045158|gb|EAR51226.1| GAF domain protein [Oceanicola granulosus HTCC2516]
          Length = 622

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 72/216 (33%), Gaps = 20/216 (9%)

Query: 208 KNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           +  V++  L      E     + L+ R+   EQ      I+    +     A   ++   
Sbjct: 399 QGFVAEAPLRAGDVVEAGALLARLDDRDLRLEQLRWQSEIDRFLAQQRTALAERSRD--- 455

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVP 323
           ++   +   A   ++L + E    +  I +PIAG +V  + S       QQ + L ++ P
Sbjct: 456 EVSYLEAQIAQARAQLALTEAQLAKTEIRAPIAGVVVSGDLSQQLGAPVQQGEVLFEVAP 515

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 +   V  + ++ V+ G   T+                I +I P+   +D     
Sbjct: 516 LDS-YRVELFVDERDLRWVEAGMGGTLIL---KSRPTDGLGFEIGRITPVSEARDEGN-- 569

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                  + + +   +    +LR G        A  
Sbjct: 570 -------VFVAEARLAAPGPDLRPGMEGSAKIEAGR 598



 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 38/114 (33%), Gaps = 3/114 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V++   +  E     + +PF G + +  +  G  +  G  L   +D +    ++  +   
Sbjct: 380 VAADAVLRGEVQRAAV-APFQGFVAEAPLRAGDVVEAGALLARLDDRDLR--LEQLRWQS 436

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           +  R       +  +   ++   LE        QL     +   T  +    G+
Sbjct: 437 EIDRFLAQQRTALAERSRDEVSYLEAQIAQARAQLALTEAQLAKTEIRAPIAGV 490


>gi|326336592|ref|ZP_08202761.1| Acr family acridine efflux pump AcrA [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325691257|gb|EGD33227.1| Acr family acridine efflux pump AcrA [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 408

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 72/220 (32%), Gaps = 19/220 (8%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL--KEI 262
            +K   +++ D    +  V  +      +++E     ++ +        +  +    ++ 
Sbjct: 82  VKKGELLAELDKTNLQENVINAQANYNASLNEVTYYQQNYDRKKSMYENQIISKADFEQA 141

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLM 319
              L   +      ++ L   +       I +PI G I+  +             +  L 
Sbjct: 142 YYQLHNAKAAVTQRLTILNQAKTNLGYANIYAPIDGVILSREV-EVGQTVAATMSAPTLF 200

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           KI    K   + A V    I  VK G   T     Y     ++F+  + ++  +     +
Sbjct: 201 KIAKDIKKMQVEANVDEADIGQVKLGQRVTFTVDAYP---LEEFQGKVSQV-RLSPTTTS 256

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           N+ T   Y VI+        +   +L+ G  A ++     
Sbjct: 257 NVVT---YTVIVD-----AENPEEKLKPGLTATIIIYTNE 288



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 46/107 (42%), Gaps = 8/107 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+++G +   D + E+ +  SG++ K  V+  SQ+ +G  L   +     + +       
Sbjct: 49  VTATGSVQPVDEI-EVGTQVSGLVSKIYVDYNSQVKKGELLAELDKTNLQENV------- 100

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            N + + +   + + +    YD  +  +E++     DF   Y+   +
Sbjct: 101 INAQANYNASLNEVTYYQQNYDRKKSMYENQIISKADFEQAYYQLHN 147


>gi|300817389|ref|ZP_07097606.1| efflux pump membrane protein [Escherichia coli MS 107-1]
 gi|300530015|gb|EFK51077.1| efflux pump membrane protein [Escherichia coli MS 107-1]
 gi|324016831|gb|EGB86050.1| efflux pump membrane protein [Escherichia coli MS 117-3]
          Length = 351

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 57  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 116

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     I                         Q    +
Sbjct: 117 LEHTKDTLISSKAALNAAIQAYKANKALIMNTPL------------------NRQPQVVE 158

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 159 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 216

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 217 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 274

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 275 RVPVEVSLDPKELMEHPLRIGLSMTATID 303



 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 20/187 (10%), Positives = 68/187 (36%), Gaps = 10/187 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N   I +  SG +     ++ + + QG  L++ +  + T  ++  K ++ N+     
Sbjct: 14  VTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTN 73

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           + ++  ++ + +  + +    +   +      L   G       +     + S   +L  
Sbjct: 74  KLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNA 133

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
            +   ++     ++  L  +  ++ A  ++ +  L + +   +      ++Q  +   E 
Sbjct: 134 AIQAYKANKALIMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGET 193

Query: 222 IVYKSTL 228
           +    +L
Sbjct: 194 VSPGQSL 200


>gi|294666504|ref|ZP_06731746.1| RND efflux membrane fusion protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292603735|gb|EFF47144.1| RND efflux membrane fusion protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 315

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 54/175 (30%), Gaps = 12/175 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             L  +          ++++       +    +L  E      +Y       + +     
Sbjct: 59  TRLASERAQAQAEVAAIQQSRAVASIDVARSRQLLAEGLAGRRDYEL-TQIKVAEADAKL 117

Query: 274 ADEMSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           A+  +KLT ++    +++   + +P  G +    + S S        L  I P      +
Sbjct: 118 AESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAV 177

Query: 331 RAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQ 377
              +  + +  ++ G            ++F  +  +    F   +  IDP  +  
Sbjct: 178 ELYIDGRDVPLIRPGRPVRLEFEGWPAIQFSGWPSVAHGMFDGRVRAIDPNAAPD 232



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 60/159 (37%), Gaps = 13/159 (8%)

Query: 42  ISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE------- 91
            + S  G+++     D    + +   G ++++ V +G  + +G P+    D++       
Sbjct: 2   QTASGKGQVVSLDPSDRQQPVTAFVPGRVERWYVHDGQHVAKGDPIARVGDLDPDLLTRL 61

Query: 92  --TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                    +  +I+  R     + +    L  +     + +E  + ++ +   K   + 
Sbjct: 62  ASERAQAQAEVAAIQQSRAVASIDVARSRQLLAEGLAGRRDYELTQIKVAEADAKLAESR 121

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +K+    I  + R     +   R   + +L+  + S+++
Sbjct: 122 AKLTRIDI-QLNRQSAQLVRAPRDGRVQQLNAASGSAMV 159


>gi|258592015|emb|CBE68320.1| putative Macrolide-specific efflux protein macA precursor [NC10
           bacterium 'Dutch sediment']
          Length = 407

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 75/243 (30%), Gaps = 38/243 (15%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           L +      ++      ++ R  + +L  M    +   D +      +A           
Sbjct: 96  LLQLDQADLQLQVGKAEAILRQTRTRLGAMNGGDMLPDDQQPVVRQAKANSDDAALWYER 155

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           M++L+++ AVS+NDL+            L   + + + +   + E               
Sbjct: 156 MRSLYKEGAVSRNDLDTALAKSQALQAALDSAMSQVRALADQLREQQ------------- 202

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS----QP 317
                           + L +  +  +   I +PI G+I      S+  Y          
Sbjct: 203 ----------------AALDLARRNLQYTVIRAPIDGSIKERNV-SAGQYIAGGSMQNTK 245

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L+ +V       ++A V  +    ++ G    V+   Y      +F    +++ P +   
Sbjct: 246 LLTLV-RDDPLKLKASVPERFQGQIRPGQEVKVQVEAYPGR---EFSGTAKRVGPAVFTD 301

Query: 378 DNN 380
              
Sbjct: 302 TRT 304



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 49/138 (35%), Gaps = 1/138 (0%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +++  V+ G ++  G PLL  +  +    +   +  ++  R  +          +++
Sbjct: 76  SGSVERILVDLGDRVRAGQPLLQLDQADLQLQVGKAEAILRQTRTRLGAMNGGDMLPDDQ 135

Query: 124 YDVLEKA-FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             V+ +A   S +  L     +       V    + +     +     + S       L 
Sbjct: 136 QPVVRQAKANSDDAALWYERMRSLYKEGAVSRNDLDTALAKSQALQAALDSAMSQVRALA 195

Query: 183 NKSSLLRALLSSHQKDLT 200
           ++    +A L   +++L 
Sbjct: 196 DQLREQQAALDLARRNLQ 213


>gi|299136161|ref|ZP_07029345.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX8]
 gi|298602285|gb|EFI58439.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX8]
          Length = 402

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 48/380 (12%), Positives = 114/380 (30%), Gaps = 57/380 (15%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
               G + +  V +   + +GT L   +D                 R ++   +SAL   
Sbjct: 56  PLVEGPVVELPVHDNDFVKKGTLLYKIDD-----------------RPYLYALQSALAAQ 98

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                ++E        Q+         +  +V   G  +   +       ++       +
Sbjct: 99  EQLEGLIENESRQISSQV---------SHVEVSTAGRQAALANEVRADDEIQVSEAGISE 149

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            E      +A       +L  ++ L  K  ++ +D+++   +    T  +++   +    
Sbjct: 150 AEAAVKQAQADSEYASGNLHRIEPLLAKGFITTDDVHRARTLADAKTAAVQQADSQLTLA 209

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQ----------RTFADEMSKLTILEKTREQK 290
              +     +     A    +    + +++                 + + +     EQ 
Sbjct: 210 KAKLLAATAQRQQAVAQ-KAQSEAQVNESEHSVLVLAPLIAQRESRAAAVRLARYNYEQC 268

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           ++++P    +      S   YA+  Q +  ++  S+  +  A     QI H+  G +  V
Sbjct: 269 SVVAPFDARVTNLTI-SEGQYAKVGQQVFTLI-DSRTWWALANFRESQISHITPGESVDV 326

Query: 351 RFPH--------------YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
                             Y    +      +    P + +  N ++    Y V ++I D 
Sbjct: 327 YLMSDSKTKLHGTVESVGYGVTPDPDVVGKLASGLPDVQRTLNWVRLASRYPVRIRIID- 385

Query: 397 AFSDNNIELRNGFPAEVLFT 416
                   LR G  A V+  
Sbjct: 386 ---PPPSVLRVGQVANVIVR 402


>gi|281179448|dbj|BAI55778.1| multidrug resistance protein [Escherichia coli SE15]
          Length = 387

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKEA 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVIE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 84/232 (36%), Gaps = 11/232 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K   LL+++  I L   ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSDRRKYFALLAVVLFIALSGAYAYWSMELKDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKEALEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
            L  +  ++ A  ++ +  L + +   +      ++Q  +   E +    +L
Sbjct: 185 PLNRQPQVIEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGETVSPGQSL 236


>gi|110597863|ref|ZP_01386146.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
 gi|110340588|gb|EAT59071.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
          Length = 360

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 67/195 (34%), Gaps = 19/195 (9%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               S  E      E +  L+    LY E  +   + L E  +   Q       +  +L 
Sbjct: 102 EARSSVAEQDAQARESRAQLKRKRNLYHEGAISRQD-LDEAEKKSVQADELLQQKALQLK 160

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQ 340
           + +    + ++ +P  G ++  Q+    +Y      + ++V P      I  +V    I 
Sbjct: 161 MRQDDLNKLSVKAPFDG-VLTLQNVKQGDYLPAGTLVARVVDPAG--YLISVEVDELDIP 217

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            ++ G  ATV F  Y D R     A++ +I P   +           ++ L I   A   
Sbjct: 218 RIRNGQKATVVFDAYPDQR---LSAVVSRIVPQTDKITKTS------KIYLTIDKPA--- 265

Query: 401 NNIELRNGFPAEVLF 415
               ++ G  A    
Sbjct: 266 --GTIQAGMTATANI 278



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 40/125 (32%), Gaps = 7/125 (5%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPF---SGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
             +  ++ ++G +  E     I +     SG +     + G  + +G  +++F+  +   
Sbjct: 43  AELVQAIYATGFVEAES----IANLNTEFSGTVSHIGAKEGESVKRGQNIISFDSPQPQF 98

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   + S+          ++ L    N Y     + +  +E     +        K   
Sbjct: 99  AVSEARSSVAEQDAQARESRAQLKRKRNLYHEGAISRQDLDEAEKKSVQADELLQQKALQ 158

Query: 155 YGISS 159
             +  
Sbjct: 159 LKMRQ 163


>gi|81300961|ref|YP_401169.1| hypothetical protein Synpcc7942_2152 [Synechococcus elongatus PCC
           7942]
 gi|81169842|gb|ABB58182.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 419

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/362 (13%), Positives = 111/362 (30%), Gaps = 54/362 (14%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R      +    + +I +   I W     +   V   G I     V+++ +P  G+ + 
Sbjct: 22  RRTFFRYARIALGVGLISLAAYILWLRNSSVSSRV---GYI--NGTVIKLYAPIPGVAQL 76

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E G  + +G  L    +    +L   ++  +  L    + E++A D      + +  
Sbjct: 77  KPLEPGQALQKGQVLGEITNDRNPELETDRQNLVTRL-AQAEAERAAFDAQIASREQVRS 135

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              S+         ++    S      +     S                          
Sbjct: 136 QILSKANNQQQLEEQFFQQGSDRTRNELRQAQES-------------------------- 169

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L+  + +    ++L E  AVSQ   +       ++   +    +E +     +  +  
Sbjct: 170 --LAFAEIEAKRYQSLVESGAVSQQLADAALSQAREARAVVAAKQNELQRQRTSLLAIRQ 227

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-----------------I 292
              L+ A  L      L   ++   D   K   +  T ++                   I
Sbjct: 228 GLQLDSARTLSIPELRLLDLEKELVDLTLKRQTVNTTIQEIRLEIINIQEQIKLQKKALI 287

Query: 293 LSPIAGTIVYNQSFS--SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            +PI G +    + +           PL+++V      +I A V+ +    ++ G  A +
Sbjct: 288 KAPIQGVVWSIINRTGLLGIPLTAGDPLLEMVTCEDT-WITALVSERDRNRLRVGQQADI 346

Query: 351 RF 352
           R 
Sbjct: 347 RL 348


>gi|121591087|ref|ZP_01678398.1| membrane-fusion protein [Vibrio cholerae 2740-80]
 gi|147674153|ref|YP_001217115.1| membrane-fusion protein [Vibrio cholerae O395]
 gi|153818892|ref|ZP_01971559.1| membrane-fusion protein [Vibrio cholerae NCTC 8457]
 gi|153823377|ref|ZP_01976044.1| membrane-fusion protein [Vibrio cholerae B33]
 gi|229508490|ref|ZP_04397993.1| membrane-fusion protein [Vibrio cholerae BX 330286]
 gi|229511440|ref|ZP_04400919.1| membrane-fusion protein [Vibrio cholerae B33]
 gi|229518579|ref|ZP_04408022.1| membrane-fusion protein [Vibrio cholerae RC9]
 gi|229607896|ref|YP_002878544.1| membrane-fusion protein [Vibrio cholerae MJ-1236]
 gi|254848684|ref|ZP_05238034.1| membrane-fusion protein [Vibrio cholerae MO10]
 gi|255745001|ref|ZP_05418951.1| membrane-fusion protein [Vibrio cholera CIRS 101]
 gi|262161713|ref|ZP_06030731.1| membrane-fusion protein [Vibrio cholerae INDRE 91/1]
 gi|262169589|ref|ZP_06037280.1| membrane-fusion protein [Vibrio cholerae RC27]
 gi|298498351|ref|ZP_07008158.1| membrane-fusion protein [Vibrio cholerae MAK 757]
 gi|121547063|gb|EAX57201.1| membrane-fusion protein [Vibrio cholerae 2740-80]
 gi|126510562|gb|EAZ73156.1| membrane-fusion protein [Vibrio cholerae NCTC 8457]
 gi|126519095|gb|EAZ76318.1| membrane-fusion protein [Vibrio cholerae B33]
 gi|146316036|gb|ABQ20575.1| membrane-fusion protein [Vibrio cholerae O395]
 gi|229343268|gb|EEO08243.1| membrane-fusion protein [Vibrio cholerae RC9]
 gi|229351405|gb|EEO16346.1| membrane-fusion protein [Vibrio cholerae B33]
 gi|229354444|gb|EEO19367.1| membrane-fusion protein [Vibrio cholerae BX 330286]
 gi|229370551|gb|ACQ60974.1| membrane-fusion protein [Vibrio cholerae MJ-1236]
 gi|254844389|gb|EET22803.1| membrane-fusion protein [Vibrio cholerae MO10]
 gi|255737472|gb|EET92867.1| membrane-fusion protein [Vibrio cholera CIRS 101]
 gi|262021823|gb|EEY40533.1| membrane-fusion protein [Vibrio cholerae RC27]
 gi|262028445|gb|EEY47100.1| membrane-fusion protein [Vibrio cholerae INDRE 91/1]
 gi|297542684|gb|EFH78734.1| membrane-fusion protein [Vibrio cholerae MAK 757]
          Length = 377

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +   
Sbjct: 43  IEKQAVAVGQIMPS-HSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDA 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              +     +++++   L  L    K  ++   ++       D   K      K  N  +
Sbjct: 102 STELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLEL 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMKNLFEK 208
                +   +     ++Y               E   S   +  ++    L  MKN+  K
Sbjct: 162 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFK 221

Query: 209 NAVSQNDLNQQERIVYKS 226
            +VS++D  Q    +  S
Sbjct: 222 GSVSEHDAAQLNAGMPAS 239



 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 87/225 (38%), Gaps = 35/225 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  ++    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 98  LTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQ 157

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM---------KIV 322
                 S    + + +   T+ +PI+GTI+  +        +  +P++         +++
Sbjct: 158 NLELIRSGEASIGQAKLSSTLYAPISGTILNIK-------VEVGEPIISTESSQAATEMI 210

Query: 323 PHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + +     +  V+      +  G  A++    Y    E+     + K+  I S++ NN
Sbjct: 211 QLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP---EQVINGQLTKV-AIQSERLNN 266

Query: 381 LQ---TQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +    + +   ++V +   D+     N+ LR+GF A    T + 
Sbjct: 267 PENKDGKSFDNGFQVEIGQLDI---PENMTLRSGFSASAKITLQR 308


>gi|296134928|ref|YP_003642170.1| secretion protein HlyD family protein [Thiomonas intermedia K12]
 gi|294338907|emb|CAZ87245.1| putative efflux pump component [Thiomonas sp. 3As]
 gi|295795050|gb|ADG29840.1| secretion protein HlyD family protein [Thiomonas intermedia K12]
          Length = 331

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 98/312 (31%), Gaps = 41/312 (13%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           I+  +S L F N +  + E  F+  E + +          S+V+   ++    SL+    
Sbjct: 48  IEAHQSVLSFTNVQAPITELPFD--EGKAVTAGAVLARVDSRVYQQQLAIDEASLEAAAR 105

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++     N     +  +  R   +  Q+DL       E  A+S+   +  +    +S   
Sbjct: 106 QVAVATSNLAASRSTVASDRLDFAEKQRDLQRNAGQLEAGAISRQTYDLSKTAAGQSGAV 165

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L  +    K    +I                         Q       +K+ +   T   
Sbjct: 166 LARDEALVKVAANNI----------------------ALAQANLKTAQAKVALDRVTLSF 203

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTA 348
            T+ +P +G ++  +       A     +  +        ++RA +  + +  ++ G  A
Sbjct: 204 TTLRAPFSG-VLAVRQAELGELAGPGVAIFTL--DDLDHVWLRAYINEQDLGSIRLGEAA 260

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNI 403
           +V    Y           I  I          ++T        Y + + I + A +    
Sbjct: 261 SVTTDTYPGHVY---HGRIGFIASQAEFTPKTVETHAERVTLVYRIRIDIDNPAHA---- 313

Query: 404 ELRNGFPAEVLF 415
            L  G PA+   
Sbjct: 314 -LLPGMPADASI 324



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 61/200 (30%), Gaps = 15/200 (7%)

Query: 16  SLKRMTLLSIIG---IIGLITWSILLPIEISVSSSG----EILNEDNVVEIKSP-----F 63
           S +R+    ++    +  L+ W +  P    V   G     ++   N+   +S       
Sbjct: 2   SRRRLVWTGLVAALIVAALLVW-VWPPAHRWVFGPGAATNHVVVSGNIEAHQSVLSFTNV 60

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
              I +   + G  +  G  L   +       + + + S++     +    S L    + 
Sbjct: 61  QAPITELPFDEGKAVTAGAVLARVDSRVYQQQLAIDEASLEAAARQVAVATSNLAASRST 120

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                  F  ++  L    G+  +       Y +S         +       +      N
Sbjct: 121 VASDRLDFAEKQRDLQRNAGQLEAGAISRQTYDLSKTAAGQSGAVLARDEALVKVA--AN 178

Query: 184 KSSLLRALLSSHQKDLTMMK 203
             +L +A L + Q  + + +
Sbjct: 179 NIALAQANLKTAQAKVALDR 198


>gi|253690093|ref|YP_003019283.1| secretion protein HlyD family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251756671|gb|ACT14747.1| secretion protein HlyD family protein [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 419

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 103/312 (33%), Gaps = 36/312 (11%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLD-----FLGKYHSTCSKVFNYGISSVYRSLKMK 167
           E +    L   ++ + +    RE Q ++      L        ++       +    +++
Sbjct: 63  EAATQTTLAAPFEGIIREVLVREGQRVEKGQTLLLLDPGQIEIQLRQAQADVLKTQREVQ 122

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             R              +S  R+  S+ Q +L   + LFE+  V++ +++  ++ +    
Sbjct: 123 TLRQWEQSTEVSRARRAASSARSTFSNTQANLRDTQALFERGIVARMEVDTLKQQIRSQE 182

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L     E K +L   N                   D +  +    +   +   L    
Sbjct: 183 QDLNAAQEELKTVLARGN-----------------GEDRKIAEMELTNAQVRYQTLAAQV 225

Query: 288 EQKTILSPIAGTIV--------YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           E++ + +P +G +V         +    +     Q  PL  ++       +  +V    +
Sbjct: 226 ERQIVKAPFSGFVVRPATPDNGKSVVIQAGLLVSQGAPLFGVI-AQDRFQVATRVEETDL 284

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +++G    V    +A          +  ID      D +     YY+V++ + D   +
Sbjct: 285 HQLQEGMAVNVTGDGFAGQT---LTGKVTSIDMQADAADMSGSGA-YYDVVVSL-DTPLA 339

Query: 400 DNNIELRNGFPA 411
           D    +R G  A
Sbjct: 340 DLRQNIRLGMSA 351


>gi|160886189|ref|ZP_02067192.1| hypothetical protein BACOVA_04196 [Bacteroides ovatus ATCC 8483]
 gi|237723000|ref|ZP_04553481.1| ABC transporter permease [Bacteroides sp. 2_2_4]
 gi|260173682|ref|ZP_05760094.1| ABC transporter permease [Bacteroides sp. D2]
 gi|315921945|ref|ZP_07918185.1| ABC transporter permease [Bacteroides sp. D2]
 gi|156108074|gb|EDO09819.1| hypothetical protein BACOVA_04196 [Bacteroides ovatus ATCC 8483]
 gi|229447522|gb|EEO53313.1| ABC transporter permease [Bacteroides sp. 2_2_4]
 gi|313695820|gb|EFS32655.1| ABC transporter permease [Bacteroides sp. D2]
          Length = 415

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 70/202 (34%), Gaps = 25/202 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+   RL L+ +   L   L   Q+     K L  
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQERLQLKQERIGLNKELIGKQRRYEQYKRLVN 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  +++ D  Q E                 K  L  I+E   + ++   + +  +  ++ 
Sbjct: 168 EQLIAREDYRQAEEEYI-----------AAKEQLAVIDERIRQDHIFRESQIGSLDENIR 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+ A    +L       E   + +PI G +    +          + + +I+     
Sbjct: 217 NMKRSLALVRERL-------ENLKVKAPIDGQVGNLNA-QIGQSISAGEHIGQIITSD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTAT 349
             ++A++    ++ V  G  A 
Sbjct: 267 LKVQAQIDEHYVERVLPGLPAD 288



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/215 (11%), Positives = 76/215 (35%), Gaps = 21/215 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G+++    ++ + +   G +++   E G+ +  G  +L   +       +++   +
Sbjct: 62  IRVIGQVMPS-RIIYMDAIEGGRVEERLKEEGAMVKAGDVILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++  ++N R  ++ E+  L       +      + R EQ    + +            
Sbjct: 121 AYQENELRNTRISMEQERLQLKQERIGLNKELIGKQRRYEQYKRLVNEQLIAREDYRQAE 180

Query: 157 IS--SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +    L +   R+R  ++ R   E++   L   + + ++ L +++   E       
Sbjct: 181 EEYIAAKEQLAVIDERIRQDHIFR---ESQIGSLDENIRNMKRSLALVRERLEN------ 231

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
              + +  +      L   I +  +   HI ++  
Sbjct: 232 --LKVKAPIDGQVGNLNAQIGQSISAGEHIGQIIT 264


>gi|91176548|gb|ABE26665.1| membrane-fusion protein [Francisella tularensis subsp. tularensis]
          Length = 357

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)

Query: 242 RHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +Y++A +E  NY +E+++   DL + +   A + S+L           + +P  G
Sbjct: 136 ASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL-----------VKAPSDG 184

Query: 299 TIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT-------- 349
            IV  +         + +  L  IVP SK   +   V    +  VK G            
Sbjct: 185 VIVD-RIHGLGGVIVKDTDVLATIVPDSKSRIVELWVNSMDVPLVKIGDKVMLQFEGWPA 243

Query: 350 VRFPHYADIREKKFKAIIEKIDP 372
           V+F  +  +    F+  +  I P
Sbjct: 244 VQFSGWPQVAIGTFEGEVIFISP 266



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLK---KVS 102
            +   +    I +P  G + K+ V  G  + +G P++     +    + L + K   ++ 
Sbjct: 51  TLSPSERQQNISAPIGGRLGKWYVFEGDSVKKGDPIVEVLDLDPEVVSRLEEEKSAIELG 110

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I +++  I   K+ ++   +KY V + A   R  +        ++      N  ++ V  
Sbjct: 111 INSVKLAIKNTKNNIE--RHKYLVDKGASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKV 168

Query: 163 SLKMKLTRM 171
            +  + +R+
Sbjct: 169 QIARQQSRL 177


>gi|148255428|ref|YP_001240013.1| hypothetical protein BBta_4041 [Bradyrhizobium sp. BTAi1]
 gi|146407601|gb|ABQ36107.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 366

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 79/252 (31%), Gaps = 21/252 (8%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +I + R+     + ++ A  +   +  +    L     V +     +          L +
Sbjct: 57  AITVVRITRGTAAEIVYATGAVEPETWSRTTPLVRGRIVERCRCEGKAVKAGDLLARLDD 116

Query: 233 NIHEQKNMLRHINELYDEANLEFANYL----KEISRDLEQNQRTFADEMSKLTILEKTRE 288
                        E +     E  + L       S+  ++++   A   +++    +  +
Sbjct: 117 KEALATLNDLRAQEEFQRHEFERQSQLLARGASTSQAYQRSESDLARIRAQIAAQSQRLD 176

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              ++SP+ G ++  +     +       ++  V   K  ++ A V  + I  V+ G  A
Sbjct: 177 YFRLVSPMDGVVLK-EDGEVGDMVDPG-TILYRVGLEKPLWVIADVNEEDIPRVQVGQKA 234

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            +R   +           +++I P              + V + + D      +  LR G
Sbjct: 235 LLRSDAFGSQ---ALPGTVKQITPAGDPVAKT------FRVRIGLPD------DTPLRVG 279

Query: 409 FPAEVLFTAKNT 420
              E    ++  
Sbjct: 280 MSVEANIVSREK 291



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 29/106 (27%), Gaps = 1/106 (0%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
              V ++G +  E           G I +     G  +  G  L   +D E    ++  +
Sbjct: 69  AEIVYATGAVEPETWSRTT-PLVRGRIVERCRCEGKAVKAGDLLARLDDKEALATLNDLR 127

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
              +  R   + +   L    +     +++             +  
Sbjct: 128 AQEEFQRHEFERQSQLLARGASTSQAYQRSESDLARIRAQIAAQSQ 173


>gi|254286377|ref|ZP_04961335.1| Membrane-fusion protein [Vibrio cholerae AM-19226]
 gi|262402251|ref|ZP_06078812.1| membrane-fusion protein [Vibrio sp. RC586]
 gi|297579144|ref|ZP_06941072.1| membrane-fusion protein [Vibrio cholerae RC385]
 gi|150423544|gb|EDN15487.1| Membrane-fusion protein [Vibrio cholerae AM-19226]
 gi|262351033|gb|EEZ00166.1| membrane-fusion protein [Vibrio sp. RC586]
 gi|297536738|gb|EFH75571.1| membrane-fusion protein [Vibrio cholerae RC385]
 gi|327484182|gb|AEA78589.1| hypothetical protein VCLMA_A1357 [Vibrio cholerae LMA3894-4]
          Length = 377

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +   
Sbjct: 43  IEKQAVAVGQIMPS-HSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDA 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              +     +++++   L  L    K  ++   ++       D   K      K  N  +
Sbjct: 102 STELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLEL 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMKNLFEK 208
                +   +     ++Y               E   S   +  ++    L  MKN+  K
Sbjct: 162 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFK 221

Query: 209 NAVSQNDLNQQERIVYKS 226
            +VS++D  Q    +  S
Sbjct: 222 GSVSEHDAAQLNAGMPAS 239



 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 87/225 (38%), Gaps = 35/225 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  ++    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 98  LTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQ 157

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM---------KIV 322
                 S    + + +   T+ +PI+GTI+  +        +  +P++         +++
Sbjct: 158 NLELIRSGEASIGQAKLSSTLYAPISGTILNIK-------VEVGEPIISTESSQAATEMI 210

Query: 323 PHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + +     +  V+      +  G  A++    Y    E+     + K+  I S++ NN
Sbjct: 211 QLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP---EQVINGQLTKV-AIQSERLNN 266

Query: 381 LQ---TQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +    + +   ++V +   D+     N+ LR+GF A    T + 
Sbjct: 267 PENKDGKSFDNGFQVEIGQLDI---PENMTLRSGFSASAKITLQR 308


>gi|330959370|gb|EGH59630.1| multidrug resistance protein [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 402

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 88/262 (33%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   ++ + +  R  + + Q +    ++L    A+SQ
Sbjct: 101 EVSLQSAEANLAKVVRQVRGLYSNVDGMKAQLAAQRTAVQTAQDNYNRRRSLAAGGAISQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+     +  +    +  ++  +  L     L D+  +     +K  +  L Q     
Sbjct: 161 EELSHARDSLTSA----QSALNSLQQQLSTSVALVDDTVVSSHPDVKAAAAQLRQAYLAN 216

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A              + T+++P+ G +   ++       Q     M ++P     +I A 
Sbjct: 217 A--------------RSTLVAPVTGYVAK-RTVQLGQRIQPGTATMAVIPLD-QLWIDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--------- 384
               Q+  ++ G    +    Y      KF   I+ +          L  Q         
Sbjct: 261 FKETQLGKMRIGQPVEISSDLYGSDV--KFSGTIDSLGAGTGSAFALLPAQNATGNWIKI 318

Query: 385 -EYYEVILKITDLAFSDNNIEL 405
            +   V + I     + + + +
Sbjct: 319 VQRVPVRVHINPEELAQHPLRI 340



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 59/179 (32%), Gaps = 9/179 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
                + L  I+ + GL  W+           + +     NVVEI    +G +     ++
Sbjct: 23  RKFLLIGLAIIVVLCGLGIWAWYEIYGQWSEETDDAYVNGNVVEITPLVTGTVISIGADD 82

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  LL F+  +    +   + ++  +   +    S +D +  +      A ++ 
Sbjct: 83  GDLVQEGQVLLKFDPSDAEVSLQSAEANLAKVVRQVRGLYSNVDGMKAQLAAQRTAVQT- 141

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                    + +    +    G +     L      + S       L+ + S   AL+ 
Sbjct: 142 --------AQDNYNRRRSLAAGGAISQEELSHARDSLTSAQSALNSLQQQLSTSVALVD 192


>gi|34497082|ref|NP_901297.1| acriflavin resistance protein E [Chromobacterium violaceum ATCC
           12472]
 gi|34102939|gb|AAQ59303.1| acriflavin resistance protein E precursor [Chromobacterium
           violaceum ATCC 12472]
          Length = 368

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 51/158 (32%), Gaps = 16/158 (10%)

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              ++ ++     + +++   E    +KTI +P AG +    + +   Y      ++ + 
Sbjct: 135 QAQVDADEADLKSKKAQVAQQEAVVAKKTIRAPFAGRV-GITAVNPGQYLNPGDKIVTLQ 193

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                 YI   +  +QI  ++ G    V+   +     + F   I  I P I     N+Q
Sbjct: 194 -TIDPVYIDFYLPQRQIAQIRLGQQVKVKSDAFG---TEPFHGRINAISPKIDPATRNVQ 249

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            Q              ++    L  G          + 
Sbjct: 250 VQ-----------ATIANPKRLLLPGMFGNATIDVGSK 276


>gi|225850235|ref|YP_002730469.1| secretion protein HlyD [Persephonella marina EX-H1]
 gi|225645632|gb|ACO03818.1| secretion protein HlyD [Persephonella marina EX-H1]
          Length = 416

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 93/311 (29%), Gaps = 19/311 (6%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +  ++ +     +++    +  +      GK       + ++       ++  +   ++ 
Sbjct: 45  RGKIEDVIEATAIVKTQVNAYVKVGARATGKIQKMNVDIGDHVKKGELIAIIDQREILKD 104

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN----QQERIVYKSTLE 229
           I  +  DL+   + L  +  ++   +   +      A ++        ++E  + K    
Sbjct: 105 IEKSEADLKKAKANLSEIRETYPLKIKEAEKRVNS-AKAKYRYALWKYKREEELLKKEFT 163

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             EN    K  L       + A        KE    LE+ ++        L   +     
Sbjct: 164 TEENFEIAKRELDKAKAELELAEATLERIKKEFVTKLERAEKEVEYAEKVLEKNKIRLTY 223

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP--KQIQHVKKGYT 347
             I SPI G +    +            +  ++     + +  ++      I  VK G  
Sbjct: 224 TQIYSPIDGIVSKIAAR-EGETVVAGLQVANLITILDPSKLEVRIYTDETDIGKVKVGQK 282

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
                  Y D   K F+ +I KI P    ++N +    YY  I+ +           L+ 
Sbjct: 283 VFYYADAYPD---KVFEGVISKIYPEPVVRENIV----YYMTIVNVKKKYAK----YLKP 331

Query: 408 GFPAEVLFTAK 418
                      
Sbjct: 332 EMTVYAKIITG 342



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 72/213 (33%), Gaps = 3/213 (1%)

Query: 38  LPIEISVSSSGEILNEDNV-VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
             IE  + ++  +  + N  V++ +  +G I+K  V+ G  + +G  +   +  E    I
Sbjct: 46  GKIEDVIEATAIVKTQVNAYVKVGARATGKIQKMNVDIGDHVKKGELIAIIDQREILKDI 105

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  +  +K  + ++   +        + +    + +++    L    +      K F   
Sbjct: 106 EKSEADLKKAKANLSEIRETYPLKIKEAEKRVNSAKAKYRYALWKYKREEELLKKEFTTE 165

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +      ++   +   + L    LE         L   +K++   + + EKN + +   
Sbjct: 166 ENFEIAKRELDKAKAE-LELAEATLERIKKEFVTKLERAEKEVEYAEKVLEKNKI-RLTY 223

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            Q    +     ++     E       +  L  
Sbjct: 224 TQIYSPIDGIVSKIAAREGETVVAGLQVANLIT 256


>gi|296444340|ref|ZP_06886305.1| efflux transporter, RND family, MFP subunit [Methylosinus
           trichosporium OB3b]
 gi|296257987|gb|EFH05049.1| efflux transporter, RND family, MFP subunit [Methylosinus
           trichosporium OB3b]
          Length = 405

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 76/229 (33%), Gaps = 37/229 (16%)

Query: 210 AVSQNDLNQQERIVYKSTLELR------ENIHEQKNMLRHINELYDEANLEFANYLKEI- 262
           A+++ ++ ++E  + K   +L       E      +      +  D+A  +      E+ 
Sbjct: 114 AIAKAEVARREAAMAKVQKQLGLLDRDVERYKALASSAGVSRQQLDQAQTQSDTTRHELG 173

Query: 263 --SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--- 317
               DL+  + T     ++L   E    +  I SPI G ++  +        Q  Q    
Sbjct: 174 AARADLDSARATVVLRQAELDQAEINLHRTLIRSPIDGVVIDRRM-------QPGQTVTA 226

Query: 318 ------LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 L +I        + A+V    I  V +G         +    E+ F  ++++I 
Sbjct: 227 EYQTPILFQIAQDLSQIQVLAQVDEADIGAVHRGDDVRFTVEAFP---EESFAGVVDQIR 283

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              ++    +     Y V+++       + ++ L     A V       
Sbjct: 284 LAAAKTSGVVT----YTVVVR-----AQNRDMRLFPDMTATVRIITARR 323



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 31/256 (12%), Positives = 88/256 (34%), Gaps = 34/256 (13%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLP-----------------IEISVSSSGEILNEDNVV 57
           AS +    L+II       W  L                   +E SV++SG +     V 
Sbjct: 9   ASARTALALAIIFAGVFGWWRWLAADESAAGRFQTHPLGRGLVERSVTASGTVKALVTV- 67

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           ++ S  SG I   + +  SQ+ +G  +   +       +     ++   +  +   ++A+
Sbjct: 68  DVGSQLSGPIIDMKADFNSQVKRGDLIAVIDRAPFEAKVQAASANLAIAKAEVARREAAM 127

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +  +L++  E             +   +         + ++     T    +   
Sbjct: 128 AKVQKQLGLLDRDVE------------RYKALASSAGVSRQQLDQAQTQSDTTRHELGAA 175

Query: 178 RLDLEN-KSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTLELREN 233
           R DL++ +++++       Q ++ + + L        V    +   + +  +    +   
Sbjct: 176 RADLDSARATVVLRQAELDQAEINLHRTLIRSPIDGVVIDRRMQPGQTVTAEYQTPILFQ 235

Query: 234 IHEQKNMLRHINELYD 249
           I +  + ++ + ++ +
Sbjct: 236 IAQDLSQIQVLAQVDE 251


>gi|145641915|ref|ZP_01797489.1| multidrug resistance protein A [Haemophilus influenzae R3021]
 gi|145273394|gb|EDK13266.1| multidrug resistance protein A [Haemophilus influenzae 22.4-21]
          Length = 345

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 90/274 (32%), Gaps = 34/274 (12%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                +L   + ++  +      L++        L+  Q +LT    L +  A+ +    
Sbjct: 57  EQAKSNLANAVRQIEQLGFTVQQLQSAVHANEISLAQAQGNLTRRIQLEKMGAIDKESFQ 116

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             +  V  +   L  + ++       +  +      +  N +                  
Sbjct: 117 HAKEAVELAKANLNASKNQLAANQALLRNVPLREQPQIQNAI------------------ 158

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           S L       ++  I SPI G +   ++            LM +V  ++  ++ A     
Sbjct: 159 SSLKQAWLNLQRTKIRSPIDGYVAR-RNAQVGQAVSVGGTLMAVV-SNEQMWLEANFKET 216

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYY 387
           Q+ +++ G    + F  Y   + K+F  +I  I+          P  +   N ++  +  
Sbjct: 217 QLTNMRIGQPVKIHFDLYG--KNKEFDGVINGIEMGTGNAFSLLPSQNATGNWIKVVQRV 274

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            V +K+    F++  + +  G  A       +++
Sbjct: 275 PVRIKLDPQQFAEMPLRI--GLSATAKVRIADSS 306



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 54/159 (33%), Gaps = 13/159 (8%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V + S  +G + K   +N  ++  G  L+  +D       +  K ++ N    I+
Sbjct: 12  VGGNQVMVSSQVAGNVAKINADNMDKVHSGDVLIELDDTNAKLSFEQAKSNLANAVRQIE 71

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLG------------KYHSTCSKVFNYGISS 159
                +  L +     E +    +  L   +             ++     ++    +++
Sbjct: 72  QLGFTVQQLQSAVHANEISLAQAQGNLTRRIQLEKMGAIDKESFQHAKEAVELAKANLNA 131

Query: 160 VYRSLKMKLTRMRSI-YLNRLDLENKSSLLRALLSSHQK 197
               L      +R++    +  ++N  S L+    + Q+
Sbjct: 132 SKNQLAANQALLRNVPLREQPQIQNAISSLKQAWLNLQR 170


>gi|261321903|ref|ZP_05961100.1| efflux pump protein [Brucella ceti M644/93/1]
 gi|261294593|gb|EEX98089.1| efflux pump protein [Brucella ceti M644/93/1]
          Length = 388

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 76/228 (33%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 109 LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFNRVSA 168

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 169 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 224

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+PIAGT+   ++    ++     P   ++  
Sbjct: 225 -----------AKAEVELAERNVRLTRVLAPIAGTVTQVENIQPGSFLAVGDPAFTLI-- 271

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 272 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITP 316



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/241 (10%), Positives = 71/241 (29%), Gaps = 24/241 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIK 60
           ++    HP   + + ++  +  I +  W             G+ ++ED+       V I 
Sbjct: 34  QDQSPKHPMLRRILLIVGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAIT 85

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG + +  V     + +G  L   +       +D  K ++      +    + L   
Sbjct: 86  PQVSGQVIRVAVGPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKL----AGLVLT 141

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +        +       +   +  +     F            +++ +          
Sbjct: 142 YKQQLASVAQAKDDVTFAQEQFNRVSALVHDKFEARAQFDQAERALQVAKQEQNAAASAA 201

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
               + L   L    Q+  +    L  K   ++ +L ++   + +    +   + + +N+
Sbjct: 202 AATLAQLGGTLDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPIAGTVTQVENI 255

Query: 241 L 241
            
Sbjct: 256 Q 256


>gi|170744596|ref|YP_001773251.1| secretion protein HlyD family protein [Methylobacterium sp. 4-46]
 gi|168198870|gb|ACA20817.1| secretion protein HlyD family protein [Methylobacterium sp. 4-46]
          Length = 397

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/363 (11%), Positives = 98/363 (26%), Gaps = 82/363 (22%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V NG  +  G  +   +D +        +++++     + T++S +  +   
Sbjct: 85  SGYLASVPVVNGQTVRAGDVIARIDDGDY-------RLALRAAEDKLATQRSTIARIA-- 135

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                                         ++ +        E 
Sbjct: 136 ---------------------------------------------RQVEAARAQVAQGEA 150

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +    RA       D      L +    ++  L Q +    +S   ++           +
Sbjct: 151 QVEAARADQVRAAADYQRQTQLAQSEFAARARLEQAKADRDRSDANVKAAEAALLAAKAN 210

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +  L  +                 + +   A+  + +    +      + +P  G I  N
Sbjct: 211 VAVLEAQGR---------------EAESLAAELRTGVDRAARDLSFTELRAPFDGVI-GN 254

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++  +  Y Q    +  +VP      + A     Q+  ++ G    +R   + D      
Sbjct: 255 KAVEAGAYVQPGSRVAALVPLDS-VRVDANFKETQLARMRVGQPVHIRVDAWPDR---DI 310

Query: 364 KAIIEKIDPII----SQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLF 415
              +E   P      S    +  T  + +++    +++   A       LR G       
Sbjct: 311 LGTVESFSPASGSVFSLLPPDNATGNFTKIVQRLPVRVKVPAEIAREGLLRPGLSVVAKV 370

Query: 416 TAK 418
             +
Sbjct: 371 DTR 373


>gi|78224231|ref|YP_385978.1| secretion protein HlyD [Geobacter metallireducens GS-15]
 gi|78195486|gb|ABB33253.1| Secretion protein HlyD [Geobacter metallireducens GS-15]
          Length = 403

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 72/257 (28%), Gaps = 56/257 (21%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            ++     N L+ +     +RA L+  +++    + L +   VSQ+D +           
Sbjct: 94  AQVEQTRGNYLNAQANLQRVRADLADARRNQERNRQLLKDGVVSQSDFDAA--------- 144

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                                       N  +     ++  + + A      +  E    
Sbjct: 145 ---------------------------DNRYQMAQATVKAAEGSVAQTRGAFSQSETNLR 177

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             TI SP+ G +V             S     L  I        I   V    I  V+ G
Sbjct: 178 YATIRSPVDGIVVSRNVD-VGQTVAASFQTPTLFTIAQDLTRMEIDTSVDEADISRVQVG 236

Query: 346 YTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
              +     Y + R   F   + ++   P+++Q                   +   + ++
Sbjct: 237 QPVSFTVDSYPENR---FTGTVRQVRNAPVVTQNVVTYVVV-----------IDVDNKDM 282

Query: 404 ELRNGFPAEVLFTAKNT 420
           +L+ G  A V       
Sbjct: 283 KLKPGMTANVSIETARK 299



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/116 (11%), Positives = 37/116 (31%), Gaps = 2/116 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I+K  V+  S + +G  +   +    +  ++  + +  N + ++   ++ L      
Sbjct: 64  SGTIQKLFVDYNSPVKKGQVIAQIDPSLFSAQVEQTRGNYLNAQANLQRVRADLADARRN 123

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            +   +  +       DF         ++    + +   S+            N  
Sbjct: 124 QERNRQLLKDGVVSQSDFDAA--DNRYQMAQATVKAAEGSVAQTRGAFSQSETNLR 177


>gi|95928998|ref|ZP_01311743.1| putative GAF sensor protein [Desulfuromonas acetoxidans DSM 684]
 gi|95134899|gb|EAT16553.1| putative GAF sensor protein [Desulfuromonas acetoxidans DSM 684]
          Length = 608

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 17/188 (9%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN---QRTFADEMSKLTI 282
              +L  ++  +   L+ + ++     +E        + D  Q    +       +++ +
Sbjct: 400 EQGQLLCSLDSRDLHLQKLAKVSQHRQMEQQYQDAVANHDRSQAVIIRAQLEQSQAEMDL 459

Query: 283 LEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           L+    + ++ +P +G +V  + S       +Q + L ++ P      I  KV  ++I  
Sbjct: 460 LDARLARTSLTAPFSGLVVSGDLSQRLGGAVEQGEVLFEVTPLDAYRVI-LKVDERRIGD 518

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           V  G   T+      D R       ++KI PI   +D     + Y+ V     +      
Sbjct: 519 VAVGQHGTLVLSSLPDNRYPF---AVDKITPITKAED----GRNYFRV-----EAHLQQI 566

Query: 402 NIELRNGF 409
           +  LR G 
Sbjct: 567 DDSLRPGM 574


>gi|238798928|ref|ZP_04642393.1| hypothetical protein ymoll0001_14360 [Yersinia mollaretii ATCC
           43969]
 gi|238717238|gb|EEQ09089.1| hypothetical protein ymoll0001_14360 [Yersinia mollaretii ATCC
           43969]
          Length = 321

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 91/253 (35%), Gaps = 17/253 (6%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-LNQQERIVYKS 226
           L  ++    N    + + +LL+A     +      +    + A S  D   ++++ ++ S
Sbjct: 74  LNALKQAQANVQSAQAQLALLKAGYRDEEIAQVKSEVSQREAAFSYADSFLKRQQGLWAS 133

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEK 285
                  +   +            +  + A YL     +++ Q +   A   ++L   + 
Sbjct: 134 KATSANELENARTARNQAQANLQASKDKLAQYLSGNRPQEIAQAEANLAQAEAELAQAQL 193

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             +  T+LSP AGT++  ++         S  +  +   +   ++RA V+   +     G
Sbjct: 194 NLQDTTLLSPSAGTVLT-RAVEPGTILSASNTVFTLS-LTDPVWVRAYVSECNLDKAIPG 251

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSD 400
               V F       +K +   I  + P       S +   L+T   Y + + ITD     
Sbjct: 252 TQVEV-FT--DGRPDKPYHGKIGFVSPTAEFTPKSVETPELRTDLVYRLRIIITDA---- 304

Query: 401 NNIELRNGFPAEV 413
            +  LR G P  V
Sbjct: 305 -DESLRQGMPVTV 316



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 47/135 (34%), Gaps = 7/135 (5%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G  I  G  L   +D    + +   + ++++ +  +   K+      ++
Sbjct: 45  GGRLASLAVDEGDDIQPGQQLGKLDDGPYLNALKQAQANVQSAQAQLALLKAGY---RDE 101

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                K+  S+ E    +   +      ++    +S       +  R ++    + +L+ 
Sbjct: 102 EIAQVKSEVSQREAAFSYADSFLKRQQGLWASKATSANELENARTARNQA----QANLQA 157

Query: 184 KSSLLRALLSSHQKD 198
               L   LS ++  
Sbjct: 158 SKDKLAQYLSGNRPQ 172


>gi|167627634|ref|YP_001678134.1| membrane fusion protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597635|gb|ABZ87633.1| membrane fusion protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 346

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 83/255 (32%), Gaps = 19/255 (7%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL- 230
           +   L   +   K    +  L+  Q+ +    ++ + N             +    ++L 
Sbjct: 101 KDYQLQVANANAKIIQAKGQLAVAQEQV----SVAKSNLTKAQSSLDTATSMADRYIKLY 156

Query: 231 RENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +E+    ++  ++IN+     +A  E  + LK+    +E  +                  
Sbjct: 157 KEDAGSLQDAQKYINQKIQAEKAKDEAYSSLKQALVQVEIAKAQVGAAKVGYDNASLNLS 216

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             T+++P  G +   + +         QPL   +  +K  +I A      +  +K G + 
Sbjct: 217 YTTLIAPDDGYVSNLKIY-KGQLVSTGQPLFGFI-DNKTWWIDANFKETDLDRIKPGQSV 274

Query: 349 TVRFPHYADIREKKFK------AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
            +    Y+                +  + P  +   N ++  + + V + +     +D  
Sbjct: 275 KIELDMYSHTYTGTVNSISYATGSVFSLLPPENATGNWVKVTQRFPVKIVL----KNDPK 330

Query: 403 IELRNGFPAEVLFTA 417
             LR G  A V    
Sbjct: 331 YPLRVGASATVKVDT 345



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/167 (8%), Positives = 52/167 (31%), Gaps = 6/167 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+ I     G I+K  V+N   + +G  L+  +  +    +      I   +  + 
Sbjct: 63  VNADVINISPKVGGYIEKVYVQNNQYVHKGDKLVQIDPKDYQLQVANANAKIIQAKGQLA 122

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC-----SKVFNYGISSVYRSLKM 166
             +  +    +     + + ++       ++  Y         ++ +        ++   
Sbjct: 123 VAQEQVSVAKSNLTKAQSSLDTATSMADRYIKLYKEDAGSLQDAQKYINQKIQAEKAKDE 182

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVS 212
             + ++   +     + +    +    +   +L+    +  +   VS
Sbjct: 183 AYSSLKQALVQVEIAKAQVGAAKVGYDNASLNLSYTTLIAPDDGYVS 229


>gi|134301235|ref|YP_001121203.1| membrane fusion protein [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134049012|gb|ABO46083.1| membrane fusion protein [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 356

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)

Query: 242 RHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +Y++A +E  NY +E+++   DL + +   A + S+L           + +P  G
Sbjct: 135 ASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL-----------VKAPSDG 183

Query: 299 TIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT-------- 349
            IV  +         + +  L  IVP SK   +   V    +  VK G            
Sbjct: 184 VIVD-RIHGLGGVIVKDTDVLATIVPDSKSRIVELWVNSMDVPLVKIGDKVMLQFEGWPA 242

Query: 350 VRFPHYADIREKKFKAIIEKIDP 372
           V+F  +  +    F+  +  I P
Sbjct: 243 VQFSGWPQVAIGTFEGEVIFISP 265



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLK---KVS 102
            +   +    I +P  G + K+ V  G  + +G P++     +    + L + K   ++ 
Sbjct: 50  TLSPSERQQNISAPIGGRLGKWYVFEGDSVKKGDPIVEVLDLDPEVVSRLEEEKSAIELG 109

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I +++  I   K+ ++   +KY V + A   R  +        ++      N  ++ V  
Sbjct: 110 INSVKLAIKNTKNNIE--RHKYLVDKGASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKV 167

Query: 163 SLKMKLTRM 171
            +  + +R+
Sbjct: 168 QIARQQSRL 176


>gi|148557405|ref|YP_001264987.1| secretion protein HlyD family protein [Sphingomonas wittichii RW1]
 gi|148502595|gb|ABQ70849.1| secretion protein HlyD family protein [Sphingomonas wittichii RW1]
          Length = 397

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 66/208 (31%), Gaps = 16/208 (7%)

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI---SRDLEQNQRTFADEMSK 279
           + +S  E RE + + +N     N     A    A+  + +      + Q Q       ++
Sbjct: 174 LGESGAETREKVSQLRNQAALANAKLAAARASLASAQRRVGTLRAQVSQAQAQGEAARAQ 233

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L       E   + + + G I  +++     + Q    +M +VP     YI A     Q+
Sbjct: 234 LAAANTNVEATIVRASVDGRI-GDKTVRQGQFVQAGTRMMSVVPTHD-VYIEANFKETQL 291

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVIL 391
             ++ G    V       +        I  I P        +  Q      T+    V +
Sbjct: 292 GLMRVGQPVKVEVDALPGV---DIPGRIASISPGTGAQFSVLPPQNATGNFTKIVQRVPV 348

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +I      +    L  G   EV    ++
Sbjct: 349 RIAISPGPETRALLVPGMSVEVTVDTRS 376



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/142 (11%), Positives = 39/142 (27%), Gaps = 5/142 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V +   +  G PL+  +  +        +  I   R +     + +      
Sbjct: 87  SGYVDQVFVIDNQDVKAGQPLVRIDPRDYRAQAAQFQAQIDVARANAAGVDAQMGEQQAA 146

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCS-----KVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               E    +          +Y                +S +     +   ++ +   + 
Sbjct: 147 IARAEADVAAAAADAGFAQAEYVRYQPLGESGAETREKVSQLRNQAALANAKLAAARASL 206

Query: 179 LDLENKSSLLRALLSSHQKDLT 200
              + +   LRA +S  Q    
Sbjct: 207 ASAQRRVGTLRAQVSQAQAQGE 228


>gi|259907582|ref|YP_002647938.1| Multidrug resistance secretion protein A [Erwinia pyrifoliae
           Ep1/96]
 gi|224963204|emb|CAX54688.1| Multidrug resistance secretion protein A [Erwinia pyrifoliae
           Ep1/96]
 gi|283477424|emb|CAY73340.1| Multidrug resistance protein A [Erwinia pyrifoliae DSM 12163]
          Length = 390

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 85/259 (32%), Gaps = 28/259 (10%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N    +    L +  +   Q DL   + L   N + + 
Sbjct: 99  QAFEKAQTALATSVRQTHQLIINGKQHQAAIELQKTAMEQAQADLRRREPLGAANLIGKE 158

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L      V  +  +L   + +       I     E                  NQ    
Sbjct: 159 ALQHARDAVATAKAQLDVAMQQYNANQAMILNTTLE------------------NQPAVK 200

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              ++L     T ++ +++SPI G +   +S    +    + PL+ IVP +   ++ A  
Sbjct: 201 KSAAELRDAWLTLQRTSVVSPIDGYVSR-RSVQVGSQIGTTTPLLAIVPANH-LWVDANF 258

Query: 335 TPKQIQHVKKGYTATVRFPHYAD--IREKKF------KAIIEKIDPIISQQDNNLQTQEY 386
              Q+  V+ G  ATV    Y D  +   K          +  + P  +   N ++  + 
Sbjct: 259 KETQLAGVRIGQPATVLSDIYGDDVVYHGKVVGLDMGTGSVFSLLPAQNATGNWIKVVQR 318

Query: 387 YEVILKITDLAFSDNNIEL 405
             V + +     + + + +
Sbjct: 319 LPVRIALDAQEVAKHPLRI 337



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 53/160 (33%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK------- 104
              N V++ +  +G + K   +N   + +G  L+T +  +     +  + ++        
Sbjct: 57  VAGNQVQMMAQVAGSVNKVWFDNTDFVKKGDVLVTLDRTDAGQAFEKAQTALATSVRQTH 116

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    ++A++      +  +     RE      L    +          +     +
Sbjct: 117 QLIINGKQHQAAIELQKTAMEQAQADLRRREPLGAANLIGKEALQHARDAVATAKAQLDV 176

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            M+        +    LEN+ ++ ++        LT+ + 
Sbjct: 177 AMQQYNANQAMILNTTLENQPAVKKSAAELRDAWLTLQRT 216


>gi|315650839|ref|ZP_07903886.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
 gi|315486932|gb|EFU77267.1| conserved hypothetical protein [Eubacterium saburreum DSM 3986]
          Length = 587

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 59/421 (14%), Positives = 133/421 (31%), Gaps = 57/421 (13%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   +SSSG I  + +   I +  SG I       G  + +   L   +       I+  
Sbjct: 46  ISSEISSSGTITPK-DTYNITALVSGEIVSADFNIGDMVSKDQVLYQIDKSSIVSDINSS 104

Query: 100 KVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             S+            +  K+  +F  N Y    K +               +  + ++N
Sbjct: 105 NNSLNKANSGYASASKEYAKAKAEFAGNLYRSTRKGYIKELSIQTGDKISGGTKLATIYN 164

Query: 155 YGISSVY----RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK-- 208
             + ++      S  + +T   S  L   D   +       +SS  + L   + L     
Sbjct: 165 DNVMNIRIPFLSSDAVNITPGMSGTLTISDTGEQVEGKVVSVSSMDQTLDGGR-LVRNVT 223

Query: 209 -------NAVSQNDLNQQERIV---------YKSTLELRENIH---EQKNMLRHINELYD 249
                      +   N     +           + +++  ++    + +++L ++ +  D
Sbjct: 224 FEVNNPGGLTDKTTANATVGDITSTGDGTFEASTNVDMSADLAAGVDIESVLVNVGDYVD 283

Query: 250 ------EANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                 +   E  + L +  +D L+  Q         +   +K  ++ TI SPIAG ++ 
Sbjct: 284 VGTPIFKMTSESTDKLLKTYKDALDTAQGDVDTAKKGVDTAKKNSDEYTIKSPIAGKVIS 343

Query: 303 NQSFSSSNYAQQSQP----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +++   +            M ++        +  V  K I  V+ G    ++   + D 
Sbjct: 344 -KNYKVGDKVGSGSDNKAVTMAVIYDMSSYTFKMSVDEKDISKVQNGQKVRIKSDAFPDK 402

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                   +  +    + Q+        Y V +K+ +        +L  G   +   T +
Sbjct: 403 EY---SGTVTNVSLESTSQNGVST----YPVTVKLDETY------DLLPGMNVDGYITLE 449

Query: 419 N 419
           +
Sbjct: 450 S 450


>gi|172056239|ref|YP_001812699.1| putative multidrug resistance protein A [Exiguobacterium sibiricum
           255-15]
 gi|171988760|gb|ACB59682.1| putative multidrug resistance protein A [Exiguobacterium sibiricum
           255-15]
          Length = 218

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 11/143 (7%)

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           +    +      I  P   T+V     + +       PL      ++  ++ A V    I
Sbjct: 79  MAQAGQKPVSTAISMPTKATVVQ-SMATENGVVGAGTPLAYGFNLNE-LWVTANVEETDI 136

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEV--ILKI 393
             VK G T  V    Y D         +E+I    +       ++  T  Y +V  ++ +
Sbjct: 137 DEVKVGQTVDVYVDSYPDTT---LSGEVEQIGMTTAGTFSMMPSSNGTANYTKVAQVIPV 193

Query: 394 TDLAFSDNNIELRNGFPAEVLFT 416
                 + ++++R G    V   
Sbjct: 194 KVSLSQEKSLDIRPGMNVTVRIH 216


>gi|187924109|ref|YP_001895751.1| secretion protein HlyD [Burkholderia phytofirmans PsJN]
 gi|187715303|gb|ACD16527.1| secretion protein HlyD family protein [Burkholderia phytofirmans
           PsJN]
          Length = 358

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 54/420 (12%), Positives = 116/420 (27%), Gaps = 80/420 (19%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
            +  R  P +++      I+G+  L   W        + +   +     +   +    +G
Sbjct: 2   SSATRFSPRTIRLAAYAVILGVAVLACIWLFAGSTSETTN---DAYVTADFTLVAPRVAG 58

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + +  VE+  Q+  G  L+  +D +    +      +   R  +   ++ +        
Sbjct: 59  QVSEVLVEDNQQVKAGQLLVRIDDRDFRAALMSAGADVAAARASVANYEAEI-------- 110

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                  +R+  L+D              +  ++  R   +  T   +    +      +
Sbjct: 111 -------ARQPALVDQARATLRADDATLEFARANAARYRNLSETGAGTTQEQQHAASALA 163

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             L     +    +  ++NL         D+ + +R      L   E + EQ  +     
Sbjct: 164 EELAQQARNRAALVATVQNL---------DVLKTQRDKAAGALARAEAMLEQAKLNLSYT 214

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E                                             I +PI G +   +S
Sbjct: 215 E---------------------------------------------IHAPIDGKV-GRRS 228

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK--- 362
                +     PL+ IVP S+   + A     Q+  ++ G T  ++   +  +  +    
Sbjct: 229 ARVGAFVTTGAPLLAIVPLSEAYIV-ANFQENQLARMRPGDTVRIKVDSFPGVVIRGHVD 287

Query: 363 --FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               A      PI         T+    V ++IT          L  G   E        
Sbjct: 288 SLAPATGVSFAPIAPDNATGNFTKIVQRVPVRITIDHGQQAAAALSVGLSVETEVAVGRR 347


>gi|325299160|ref|YP_004259077.1| secretion protein HlyD family protein [Bacteroides salanitronis DSM
           18170]
 gi|324318713|gb|ADY36604.1| secretion protein HlyD family protein [Bacteroides salanitronis DSM
           18170]
          Length = 344

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 114/381 (29%), Gaps = 91/381 (23%)

Query: 48  GEILNEDNVVEIKSPF------SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           G +   DN    +          G IKK   E    + +G  LL  ED E        K+
Sbjct: 34  GNVEYTDNAQIRQHITPVNTRVQGFIKKIYFEEYKPVRKGDTLLVIEDAEF-------KL 86

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +      +    +                                   +V N GI++V 
Sbjct: 87  RLAQAEADLANALAG---------------------------------QQVTNAGIATVR 113

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +L +    +    + R +                ++L   K L E++AV++   +  + 
Sbjct: 114 NNLSVNDASIEEARVQRAN--------------AGRELQRYKKLLEEDAVTRQQYDNIQT 159

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               +                   E         +    E +  L QN+       + + 
Sbjct: 160 AYEAADARY---------------EQMLRLKHSTSLAKDEQTHRLGQNEAAIRLAQAAVD 204

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +         I++   G +  ++        Q  Q ++ IV  +   ++ A     Q+  
Sbjct: 205 LARLNLSYTVIIATCDG-VTGHKGIHEGQLVQPGQTMVDIV-DNSDLWVIANYRETQLPR 262

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKID-------PIISQQDNNL---QTQEYYEVIL 391
           +K+G  A V F     +    ++ I+E I         +I Q +      + ++   V +
Sbjct: 263 IKEG--AEVTFTA-DAVPGIVYRGIVESISDATGAAFSLIPQDNATGNFVKVEQRVPVRI 319

Query: 392 KITDLAFSDNNIELRNGFPAE 412
           ++        N  LR GF  E
Sbjct: 320 RLQGNEAEKVN-RLRAGFNVE 339


>gi|206603653|gb|EDZ40133.1| Secretion protein HlyD [Leptospirillum sp. Group II '5-way CG']
          Length = 380

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 71/206 (34%), Gaps = 17/206 (8%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              Q      +  +++  I   +  L+   +L  +  +  + + ++    L  +     +
Sbjct: 100 YRAQVLEARSNLKKIQTQIVLDRLALKRDRDLLKKHIIAQSVFDQD-QGKLSMDMANEDE 158

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRA 332
            ++ L +        TI +PI G ++  Q          +     L  I        +  
Sbjct: 159 MVAGLALANANLRYTTIRAPIDGIVISRQV-QVGQTVTAAFRTPKLFTIAQDLSEMRLDT 217

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +V+   I  V++G   T + P Y D      + I+ ++ P              Y+V+ +
Sbjct: 218 RVSESDIGDVREGQKVTFQVPAYPDRTFSG-QVIMVRVHPKTVSHVVT------YDVVSR 270

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAK 418
           ++     + ++ L+ G  A V     
Sbjct: 271 VS-----NPDLTLKPGMTALVTLHVG 291



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 79/208 (37%), Gaps = 23/208 (11%)

Query: 18  KRMTLLSIIGIIGLITWS-------------------ILLPIEISVSSSGEILNEDNVVE 58
           KR  +  +  ++GL  W                    +   +E  V+++G I      V 
Sbjct: 8   KRWAVAGVFLVMGLAFWGFRHHPATEDLDRDFVTRPVVRGDLEQKVTATGRIK-AMKTVH 66

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SGII + + E  S++ +G  L   +       +   + ++K ++  I  ++ AL 
Sbjct: 67  VGAQVSGIITEVRAEFNSRVHRGDVLAQIDPAIYRAQVLEARSNLKKIQTQIVLDRLALK 126

Query: 119 FLNN---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
              +   K+ + +  F+  + +L   +       + +     +  Y +++  +  +    
Sbjct: 127 RDRDLLKKHIIAQSVFDQDQGKLSMDMANEDEMVAGLALANANLRYTTIRAPIDGIVISR 186

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMK 203
             ++     ++     L +  +DL+ M+
Sbjct: 187 QVQVGQTVTAAFRTPKLFTIAQDLSEMR 214


>gi|254375061|ref|ZP_04990541.1| secretion protein [Francisella novicida GA99-3548]
 gi|151572779|gb|EDN38433.1| secretion protein [Francisella novicida GA99-3548]
          Length = 357

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)

Query: 242 RHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +Y++A +E  NY +E+++   DL + +   A + S+L           + +P  G
Sbjct: 136 ASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL-----------VKAPSDG 184

Query: 299 TIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT-------- 349
            IV  +         + +  L  IVP SK   +   V    +  VK G            
Sbjct: 185 VIVD-RIHGLGGVIVKDTDVLATIVPDSKSRIVELWVNSMDVPLVKIGDKVMLQFEGWPA 243

Query: 350 VRFPHYADIREKKFKAIIEKIDP 372
           V+F  +  +    F+  +  I P
Sbjct: 244 VQFSGWPQVAIGTFEGEVIFISP 266



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLK---KVS 102
            +   +    I +P  G + K+ V  G  + +G P++     +    + L + K   ++ 
Sbjct: 51  TLSPSERQQNISAPIGGRLGKWYVFEGDSVKKGDPIVEVLDLDPEVVSRLEEEKSAIELG 110

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I +++  I   K+ ++   +KY V + A   R  +        ++      N  ++ V  
Sbjct: 111 INSVKLAIKNTKNNIE--RHKYLVDKGASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKV 168

Query: 163 SLKMKLTRM 171
            +  + +R+
Sbjct: 169 QIARQQSRL 177


>gi|254373594|ref|ZP_04989080.1| secretion protein [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151571318|gb|EDN36972.1| secretion protein [Francisella novicida GA99-3549]
          Length = 357

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)

Query: 242 RHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +Y++A +E  NY +E+++   DL + +   A + S+L           + +P  G
Sbjct: 136 ASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL-----------VKAPSDG 184

Query: 299 TIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT-------- 349
            IV  +         + +  L  IVP SK   +   V    +  VK G            
Sbjct: 185 VIVD-RIHGLGGVIVKDTDVLATIVPDSKSRIVELWVNSMDVPLVKIGDKVMLQFEGWPA 243

Query: 350 VRFPHYADIREKKFKAIIEKIDP 372
           V+F  +  +    F+  +  I P
Sbjct: 244 VQFSGWPQVAIGTFEGEVIFISP 266



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLK---KVS 102
            +   +    I +P  G + K+ V  G  + +G P++     +    + L + K   ++ 
Sbjct: 51  TLSPSERQQNISAPIGGRLGKWYVFEGDSVKKGDPIVEVLDLDPEVVSRLEEEKSAIELG 110

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I +++  I   K+ ++   +KY V + A   R  +        ++      N  ++ V  
Sbjct: 111 INSVKLAIKNTKNNIE--RHKYLVDKGASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKV 168

Query: 163 SLKMKLTRM 171
            +  + +R+
Sbjct: 169 QIARQQSRL 177


>gi|90423872|ref|YP_532242.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90105886|gb|ABD87923.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 344

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 89/250 (35%), Gaps = 20/250 (8%)

Query: 168 LTRMRSIYLNRL-DLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYK 225
           L +MR+       +L    +  R    +  + L   +     NA VS +   Q  +    
Sbjct: 85  LRQMRAQRDQAAANLAKMIAGNRPQEIAQAEALVSEREAASANAKVSLDRATQLLKSAAG 144

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +     +     +     +    +   L  A + +E   D++  +   AD+ + L I E+
Sbjct: 145 TQKTYDDAAALNRQTTAQLASANEALRLMKAGFREE---DIDLARAQLADKDAALRIAER 201

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
            R    +L+P AG ++  +           + +  ++  +   ++R+ V+ +++  +K G
Sbjct: 202 QRIDADLLAPTAGVVLS-RVRELGAIVNAGETVF-VLSLTTPVWVRSYVSEQELGRIKPG 259

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSD 400
               +        + K  K  +  I         + +   L+T   Y + +   D     
Sbjct: 260 MAVELHS---DTTQIKPLKGTVGFISTTAEFTPKTVETRELRTALVYRIRVVTDDP---- 312

Query: 401 NNIELRNGFP 410
            +  LR G P
Sbjct: 313 -DNVLRQGMP 321



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 55/181 (30%), Gaps = 7/181 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I    V+ G+++  G  L + + +   D +      ++  R       + +   N  
Sbjct: 53  SGRIAALNVDEGARVEAGDKLASLDAVYFEDNLR----QMRAQRDQAAANLAKMIAGNRP 108

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++ +      E +      K     +       +   ++        R           
Sbjct: 109 QEIAQAEALVSEREAASANAKVSLDRATQLLKSAAGTQKTYDDAAALNRQTTAQLASANE 168

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
              L++A       DL   + L +K+A     + +++RI           +  +   L  
Sbjct: 169 ALRLMKAGFREEDIDLARAQ-LADKDAA--LRIAERQRIDADLLAPTAGVVLSRVRELGA 225

Query: 244 I 244
           I
Sbjct: 226 I 226


>gi|229523659|ref|ZP_04413064.1| membrane-fusion protein [Vibrio cholerae bv. albensis VL426]
 gi|229337240|gb|EEO02257.1| membrane-fusion protein [Vibrio cholerae bv. albensis VL426]
          Length = 377

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +   
Sbjct: 43  IEKQAVAVGQIMPS-HSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDA 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              +     +++++   L  L    K  ++   ++       D   K      K  N  +
Sbjct: 102 STELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLEL 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMKNLFEK 208
                +   +     ++Y               E   S   +  ++    L  MKN+  K
Sbjct: 162 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFK 221

Query: 209 NAVSQNDLNQQERIVYKS 226
            +VS++D  Q    +  S
Sbjct: 222 GSVSEHDAAQLNAGMPAS 239



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 87/225 (38%), Gaps = 35/225 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  ++    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 98  LTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQ 157

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM---------KIV 322
                 S    + + +   T+ +PI+GTI+  +        +  +P++         +++
Sbjct: 158 NLELIRSGEASIGQAKLSSTLYAPISGTILNIK-------VEVGEPIISTESSQAATEMI 210

Query: 323 PHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + +     +  V+      +  G  A++    Y    E+     + K+  I S++ NN
Sbjct: 211 QLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP---EQVINGQLTKV-AIQSERLNN 266

Query: 381 LQ---TQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +    + +   ++V +   D+     N+ LR+GF A    T + 
Sbjct: 267 PENKDGKSFDNGFQVEIGQLDI---PENMTLRSGFSASAKITLQR 308


>gi|167628358|ref|YP_001678857.1| hlyd family secretion protein, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167591098|gb|ABZ82846.1| hlyd family secretion protein, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 423

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 57/328 (17%), Positives = 108/328 (32%), Gaps = 39/328 (11%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY-DVLEKAFESREEQLLDFLGKYHST 148
           +ET     L K  +   R   +TE + +  LN +   VL    +                
Sbjct: 45  VETVGEQGLNKARVVAGRVMGETESAVMSKLNARIVKVLVDVGQEVTAGQPLIQLDDRDY 104

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              +     +      ++      +    R  +E K +   A L   +K +   ++LF+ 
Sbjct: 105 RVALAQAEANLRAARARLADAEKGARPQERQQMEQKVTAAAASLDIAKKTMERTQSLFDA 164

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            A S+  L                     +  L      Y++   + +  L+  +    +
Sbjct: 165 GAASKQQL------------------ESAQLALIQAQTTYEQLLQQQSQLLEGATAQTLE 206

Query: 269 NQRTFADEMSKLT-ILEKTREQKTILSPIAGTIVYNQSF--SSSNYAQQSQPLMKIVPHS 325
           + R   D+MS +        E   I +P+ G I    +     +  A  +  L+ IV  S
Sbjct: 207 SLRAAVDQMSAVVDQARLNVEATVITAPVNGRIASKLAHEGEMAATAPAANTLLTIV--S 264

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               + A V  + I+ ++ G T  VR      +  + F+A +  + PI +          
Sbjct: 265 SEPVVEASVPEEYIKQIQVGQTMKVRI---EQVSSEVFEAKVIAVSPIANSASKE----- 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y V L++       +      G  AEV
Sbjct: 317 -YPVKLRLPQSGRWKS------GMYAEV 337


>gi|153830367|ref|ZP_01983034.1| membrane-fusion protein [Vibrio cholerae 623-39]
 gi|262191121|ref|ZP_06049326.1| membrane-fusion protein [Vibrio cholerae CT 5369-93]
 gi|148874139|gb|EDL72274.1| membrane-fusion protein [Vibrio cholerae 623-39]
 gi|262033012|gb|EEY51545.1| membrane-fusion protein [Vibrio cholerae CT 5369-93]
          Length = 377

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +   
Sbjct: 43  IEKQAVAVGQIMPS-HSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDA 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              +     +++++   L  L    K  ++   ++       D   K      K  N  +
Sbjct: 102 STELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLEL 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMKNLFEK 208
                +   +     ++Y               E   S   +  ++    L  MKN+  K
Sbjct: 162 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFK 221

Query: 209 NAVSQNDLNQQERIVYKS 226
            +VS++D  Q    +  S
Sbjct: 222 GSVSEHDAAQLNAGMPAS 239



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 87/225 (38%), Gaps = 35/225 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  ++    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 98  LTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQ 157

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM---------KIV 322
                 S    + + +   T+ +PI+GTI+  +        +  +P++         +++
Sbjct: 158 NLELIRSGEASIGQAKLSSTLYAPISGTILNIK-------VEVGEPIISTESSQAATEMI 210

Query: 323 PHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + +     +  V+      +  G  A++    Y    E+     + K+  I S++ NN
Sbjct: 211 QLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP---EQVINGQLTKV-AIQSERLNN 266

Query: 381 LQ---TQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +    + +   ++V +   D+     N+ LR+GF A    T + 
Sbjct: 267 PENKDGKSFDNGFQVEIGQLDI---PENMTLRSGFSASAKITLQR 308


>gi|148549655|ref|YP_001269757.1| secretion protein HlyD family protein [Pseudomonas putida F1]
 gi|148513713|gb|ABQ80573.1| secretion protein HlyD family protein [Pseudomonas putida F1]
          Length = 367

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 82/254 (32%), Gaps = 17/254 (6%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           + +    +  + L    +   +    +K    + A + +++N+  R+  +    ++ N  
Sbjct: 108 VAQAQSADARATLERQDALIAQAEAAVKAAQAEAAFADHEVNRYSRLAEQGAGTVQ-NAQ 166

Query: 236 EQKNMLRHINELYDEANLEFANYLKEI---SRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           + ++ +         A        K++   +  +           + L   +       I
Sbjct: 167 QARSAVDQARARLANAQAARVAARKQVDILTAQVASADGQLKRAEAGLEKAQLDLSYTRI 226

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P+ G +   ++     Y      L+ +VP  +   +       Q+ HV+ G    +  
Sbjct: 227 TAPVDGMV-GERALRVGAYVNPGARLLSVVPLQQAYVV-GNFQETQLTHVQPGQPVRISV 284

Query: 353 PHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNN----IE 404
             ++       +  ++ I P      +    +  T  + +V+ +I      D+       
Sbjct: 285 DTFSGET---LQGHVQSIAPATGVTFAAVKPDNATGNFTKVVQRIPVKIVFDDGQPLLTR 341

Query: 405 LRNGFPAEVLFTAK 418
           LR G   E     +
Sbjct: 342 LRVGMSVEATIDTR 355



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 52/164 (31%), Gaps = 9/164 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
              +   +    +G IK+  VE+  Q+  G  L T +              + + +    
Sbjct: 55  VSADYTVVAPKVAGFIKQVLVEDNQQVTAGQLLATIDARDYQAALDAAQAQLLVAQAQSA 114

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           + R  ++ + + +          +      + ++  +          V N   +    ++
Sbjct: 115 DARATLERQDALIAQAEAAVKAAQAEAAFADHEVNRYSRLAEQGAGTVQNAQQA--RSAV 172

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
                R+ +    R+    +  +L A ++S    L   +   EK
Sbjct: 173 DQARARLANAQAARVAARKQVDILTAQVASADGQLKRAEAGLEK 216


>gi|320662962|gb|EFX30286.1| Drug resistance MFS transporter membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli O55:H7 str. USDA 5905]
          Length = 387

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 79/269 (29%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I + +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIKSPVTGYIAH-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 75/205 (36%), Gaps = 8/205 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           N  + H    K  +LL+I+  I     ++        + S+ +     N   I +  SG 
Sbjct: 5   NSNKKHSNRRKYFSLLAIVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGS 64

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLN 121
           +     ++ + + QG  L++ +  + T  ++  K ++ N+     + ++  ++ + +  +
Sbjct: 65  VTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVAS 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRL 179
            +    +   +      L   G       +     + S   +L   +   ++    +   
Sbjct: 125 ARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNT 184

Query: 180 DLENKSSLLRALLSSHQKDLTMMKN 204
            L  +  ++ A  ++ +  L + + 
Sbjct: 185 PLNRQPQVVEAADATKEAWLALKRT 209


>gi|254283504|ref|ZP_04958472.1| efflux transporter, RND family, MFP subunit [gamma proteobacterium
           NOR51-B]
 gi|219679707|gb|EED36056.1| efflux transporter, RND family, MFP subunit [gamma proteobacterium
           NOR51-B]
          Length = 398

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 110/338 (32%), Gaps = 33/338 (9%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +   ++  K   I  L        + +++L+    +  +     +  +   +   ++   
Sbjct: 8   DARAMVSKKLKLIAALLAFFVVGAAGINWLSQPAPLKVRTAVVSKGSVAHTIA--NTKAG 65

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +   L  ++ +M     + +         + L+     DL    +L E   
Sbjct: 66  TLDACRRAGISPRLGGQIAKMPVTEGDIVG------QGQILMEFWNADLMAQVSLAE--- 116

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+   ++ +R       +L +    ++  LR  N   +EA  +  +  +  +      +
Sbjct: 117 -SELRASESKREQACIAADLSKREAGRQQTLRQRNLSSEEAIDKAESEARVQASACNGAR 175

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ-----SFSSSNYA---QQSQPLMKIV 322
                  ++L +     +Q  + +P  G +           + S        +  LM I 
Sbjct: 176 AAVEVSQARLDVARAALDQTRLRAPFPGVVAEVNGEVGEFVTPSPVGIPTPPAVDLMDI- 234

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                 Y+ A +       V    TAT+    + D    +F   + +I P +   +   +
Sbjct: 235 ---SCLYVSAPIDEVDAPKVGIDMTATITLDAFPDD---EFAGRVRRIAPYVLDLEKQAR 288

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           T     V +++ +    D    +  G+ A++  T    
Sbjct: 289 T-----VDVEV-EFLQPDECSHMLPGYSADIEVTIAER 320



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 65/187 (34%), Gaps = 18/187 (9%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLIT--WSIL-LPIEI--SVSSSGEILNE-- 53
           M+  ++K+ +      LK +  L    ++G     W     P+++  +V S G + +   
Sbjct: 1   MNPSIYKDARAMVSKKLKLIAALLAFFVVGAAGINWLSQPAPLKVRTAVVSKGSVAHTIA 60

Query: 54  ---------DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
                         I     G I K  V  G  + QG  L+ F + +    + L +  ++
Sbjct: 61  NTKAGTLDACRRAGISPRLGGQIAKMPVTEGDIVGQGQILMEFWNADLMAQVSLAESELR 120

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                   E++ +    +K +   +    +     +       + ++V     +    ++
Sbjct: 121 ASES--KREQACIAADLSKREAGRQQTLRQRNLSSEEAIDKAESEARVQASACNGARAAV 178

Query: 165 KMKLTRM 171
           ++   R+
Sbjct: 179 EVSQARL 185


>gi|148554066|ref|YP_001261648.1| secretion protein HlyD family protein [Sphingomonas wittichii RW1]
 gi|148499256|gb|ABQ67510.1| secretion protein HlyD family protein [Sphingomonas wittichii RW1]
          Length = 374

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 107/323 (33%), Gaps = 16/323 (4%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R H+ T+ + ++    +   L  A             K      ++ +  +       + 
Sbjct: 57  RNHVSTDNAYVNAEVAQVTPLISAQAVEVRVSDTQAVKRGDILVRLDDSNMRIALAQAEA 116

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
            L R R ++         S+ L A +++ + D+   ++ ++K  +  +     +     S
Sbjct: 117 DLARARRMFRQGT---ATSAALAAQVNAREADIATAQSDYDKARIDLDRRLALQPSGAVS 173

Query: 227 TLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             EL   R   +  +  L         A  E A     ++    +         +KL   
Sbjct: 174 GDELTAARNAFNAARGKLAQARANQGAAAGELAANQALVAGSTVETDPMVLAAKAKLAAA 233

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +   E+  I +PI G +   Q         Q  P+M IVP     Y+ A    +Q++ VK
Sbjct: 234 QLDFERAVIRAPIDGVVTRRQV-QVGQRVTQGSPIMMIVPV-SQVYVDANFKERQLRRVK 291

Query: 344 KGYTATVRFPHYA-----DIREKKFKAIIEKIDPIISQQDNNL---QTQEYYEVILKITD 395
            G +A V    Y        +   F         +I  Q+      +  +   V +++  
Sbjct: 292 PGQSAKVTADLYGGGVVYHGKVVGFSGGTGSAFALIPAQNATGNWIKVVQRLPVRIELDP 351

Query: 396 LAFSDNNIELRNGFPAEVLFTAK 418
              +++ + +      ++  +  
Sbjct: 352 SQLAEHPLRVGLSMEVDIDVSGD 374



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 14/139 (10%), Positives = 39/139 (28%), Gaps = 9/139 (6%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V +   + +G  L+  +D          ++++      +   +            L 
Sbjct: 84  EVRVSDTQAVKRGDILVRLDDSN-------MRIALAQAEADLARARRMFRQGTATSAALA 136

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               +RE  +      Y      +      ++  S  +    + +          K +  
Sbjct: 137 AQVNAREADIATAQSDYDKARIDL--DRRLALQPSGAVSGDELTAARNAFNAARGKLAQA 194

Query: 189 RALLSSHQKDLTMMKNLFE 207
           RA   +   +L   + L  
Sbjct: 195 RANQGAAAGELAANQALVA 213


>gi|146306950|ref|YP_001187415.1| RND family efflux transporter MFP subunit [Pseudomonas mendocina
           ymp]
 gi|145575151|gb|ABP84683.1| efflux transporter, RND family, MFP subunit [Pseudomonas mendocina
           ymp]
          Length = 340

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 78/232 (33%), Gaps = 20/232 (8%)

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           S    +  M++   E    + +    Q        + L + I   +      N    E N
Sbjct: 47  SLRSDESVMIRPEVEGRLATLHFREGQAVTAGDLLVSLDDAITRAEFAQARANLDLAEKN 106

Query: 253 LEFANYLKEI----SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            + A  L +     ++ L++ Q       + L + +   ++  I +P  G ++  +  S 
Sbjct: 107 HQRAQMLFQRGASNAQALDEAQSQLQASRASLALAQARLDKTQIKAPHDG-VLGLRQASV 165

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +Y    Q ++ +        +  ++  K +  V+ G T  V    Y   R   F+  I 
Sbjct: 166 GDYLSAGQNIVNL-EVLDPLKVDFRIPQKAVAQVRLGQTVEVTLDTYPGER---FRGEIY 221

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            ++P + +   +   + +             +++  LR G    V    +  
Sbjct: 222 ALNPRLDEAGRSQAIRAH-----------IGNDDRRLRPGQFVRVSVILEER 262



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 37/114 (32%), Gaps = 3/114 (2%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
            D  V I+    G +       G  +  G  L++ +D  T       + ++     +   
Sbjct: 50  SDESVMIRPEVEGRLATLHFREGQAVTAGDLLVSLDDAITRAEFAQARANLDLAEKNHQR 109

Query: 113 EKSALDFLNNKYDVLEKA---FESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            +       +    L++A    ++    L     +   T  K  + G+  + ++
Sbjct: 110 AQMLFQRGASNAQALDEAQSQLQASRASLALAQARLDKTQIKAPHDGVLGLRQA 163


>gi|300922027|ref|ZP_07138171.1| efflux pump membrane protein [Escherichia coli MS 182-1]
 gi|301328870|ref|ZP_07221908.1| efflux pump membrane protein [Escherichia coli MS 78-1]
 gi|300421598|gb|EFK04909.1| efflux pump membrane protein [Escherichia coli MS 182-1]
 gi|300844744|gb|EFK72504.1| efflux pump membrane protein [Escherichia coli MS 78-1]
          Length = 351

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 62/215 (28%), Gaps = 22/215 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 57  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 116

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     I                         Q    +
Sbjct: 117 LEHTKDTLISSKAALNAAIQAYKANKALIMNTPL------------------NRQPQVVE 158

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 159 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 216

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             Q+  V+ G +  +    Y +     F   +  I
Sbjct: 217 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGI 249



 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 20/187 (10%), Positives = 68/187 (36%), Gaps = 10/187 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N   I +  SG +     ++ + + QG  L++ +  + T  ++  K ++ N+     
Sbjct: 14  VTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTN 73

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           + ++  ++ + +  + +    +   +      L   G       +     + S   +L  
Sbjct: 74  KLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLISSKAALNA 133

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
            +   ++     ++  L  +  ++ A  ++ +  L + +   +      ++Q  +   E 
Sbjct: 134 AIQAYKANKALIMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGET 193

Query: 222 IVYKSTL 228
           +    +L
Sbjct: 194 VSPGQSL 200


>gi|134094219|ref|YP_001099294.1| multidrug resistance secretion protein; putative periplasmic linker
           protein [Herminiimonas arsenicoxydans]
 gi|133738122|emb|CAL61167.1| Multidrug resistance protein A [Herminiimonas arsenicoxydans]
          Length = 398

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 85/278 (30%), Gaps = 32/278 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++     L   +  +R++++N   L    +L  A ++  + DL   + L    AVS+ D
Sbjct: 99  ALNQAEAQLAQTVREVRTLFVNNGTLNANVALRVADVARARADLARRQELSGTGAVSKED 158

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   L+    +  +     +          A++        +      A 
Sbjct: 159 LEHARSALQTAESALQATREQLASNQVLTD------RTSVASHPNVQRAAAQVQAAYLA- 211

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        + T+ +PI G +   +S           PL+ IVP     ++ A   
Sbjct: 212 -----------LARNTLPAPITGYVAK-RSVQVGQRVAPGTPLLSIVPL-TTLWVDANFK 258

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----------E 385
             Q+  ++ G   T+    Y      ++   +  +          L TQ          +
Sbjct: 259 EVQVARMRIGQPVTLHSDLYGSSV--EYHGKVAGLSAGTGAAFALLPTQNASGNWIKVVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
              V + +     ++  + +      EV       T  
Sbjct: 317 RIPVRIALDPKELTERPLRVGLSMQVEVDIAHAEGTSL 354



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 58/182 (31%), Gaps = 10/182 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV++     G +     ++   +  G PL+  +  +    ++  +  +      + 
Sbjct: 56  VAGNVVQVTPQVGGTVVAIHADDTELVHAGMPLVELDHSDAKVALNQAEAQLAQTVREVR 115

Query: 112 TEKSALDFLNNK-----YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           T       LN        DV     +    Q L   G       +     + +   +L+ 
Sbjct: 116 TLFVNNGTLNANVALRVADVARARADLARRQELSGTGAVSKEDLEHARSALQTAESALQA 175

Query: 167 KLTRM--RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
              ++    +  +R  + +  ++ RA        L + +N         V++  +   +R
Sbjct: 176 TREQLASNQVLTDRTSVASHPNVQRAAAQVQAAYLALARNTLPAPITGYVAKRSVQVGQR 235

Query: 222 IV 223
           + 
Sbjct: 236 VA 237


>gi|270296638|ref|ZP_06202837.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270272625|gb|EFA18488.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 296

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 83/247 (33%), Gaps = 33/247 (13%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         ++S+   R D+  + +  +  +   +++   + NL    A +Q  L+ 
Sbjct: 68  QLYLKKLQLEASVKSVEGQRPDILKQVAATQEQIVQARRERDRVSNLLRVGAANQKQLDD 127

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E ++     +L       +N  R +        ++ A                      
Sbjct: 128 AESLLEVLRKQLDAQNSTLRNSDRSLTWQSSSVGIQVAQ--------------------- 166

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E    +  I SP+ GT++  Q   +   A    PL K V   +  Y+RA +T +Q
Sbjct: 167 ----IEDQLRKCHITSPLTGTVLA-QYAEAGELAAPGTPLFK-VADMEQIYLRAYITSEQ 220

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  +K G    V +  Y     K++  I+  I              + +    Y V + +
Sbjct: 221 LAEIKLGQQVKV-YADYGKEVRKEYPGIVTWISDTSEFTPKTILTKDERANLVYAVKIAV 279

Query: 394 TDLAFSD 400
            +     
Sbjct: 280 KNDGMLK 286


>gi|117921893|ref|YP_871085.1| RND family efflux transporter MFP subunit [Shewanella sp. ANA-3]
 gi|117614225|gb|ABK49679.1| efflux transporter, RND family, MFP subunit [Shewanella sp. ANA-3]
          Length = 409

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 87/273 (31%), Gaps = 26/273 (9%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +S   S+  +++         L  E K   L A + S  +   +   L      S   +
Sbjct: 63  QASKLVSVGAQVSGQIQSLPVDLGQEVKKGDLIAQIDSLAQQNNLQNALA-----SLKSI 117

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFAD 275
           N Q R       + +     Q+ ML   ++    A+ E A     +   +LEQ Q     
Sbjct: 118 NAQYRAKQAQIRQAKLEYTRQQEMLA--DKASSRADFETAEATLTVYQAELEQLQAQKQQ 175

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAK 333
               +           I +P+ GT+VY+           +Q    IV         ++A+
Sbjct: 176 AEINVDSARIDLGYTKITAPMDGTVVYSAV-EVGQTVNANQTTPTIVEMAQLDTMTVKAQ 234

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-------IISQQDNNLQTQEY 386
           ++   I +V  G      F          ++  +  I+P         S   ++     Y
Sbjct: 235 ISEADIVNVHPGQAVY--FTILGRPNHP-YRGTLRAIEPGPTSMDGDDSNMSSSDSDAIY 291

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           Y  +  +      + +  LR G  A++      
Sbjct: 292 YHGLFDV-----ENPDRTLRIGMTAQISIVLAK 319



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 53/137 (38%), Gaps = 3/137 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G +     +V + +  SG I+   V+ G ++ +G  +   + +   + +   
Sbjct: 52  IENSVLANGMLQAS-KLVSVGAQVSGQIQSLPVDLGQEVKKGDLIAQIDSLAQQNNLQNA 110

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             S+K++      +++ +     +Y   ++    +     DF     +    V+   +  
Sbjct: 111 LASLKSINAQYRAKQAQIRQAKLEYTRQQEMLADKASSRADFETAEATLT--VYQAELEQ 168

Query: 160 VYRSLKMKLTRMRSIYL 176
           +    +     + S  +
Sbjct: 169 LQAQKQQAEINVDSARI 185


>gi|254410681|ref|ZP_05024460.1| efflux transporter, RND family, MFP subunit [Microcoleus
           chthonoplastes PCC 7420]
 gi|196182887|gb|EDX77872.1| efflux transporter, RND family, MFP subunit [Microcoleus
           chthonoplastes PCC 7420]
          Length = 483

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 95/319 (29%), Gaps = 57/319 (17%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +    +G ++  G  +L  +   +   +                 +SA+  +N + 
Sbjct: 114 GRITRIVASSGDRVQAGDIILQLKPERSEAEL-----------------RSAIADVNAQT 156

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L  A                    +     I+ +   +  +   ++S           
Sbjct: 157 ATLNNA----------------QAEVRAAQADIARLKAEVGRQAAEVQSR---------- 190

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                A L   + +    + L ++    + +L+ ++R   ++                 +
Sbjct: 191 ----EADLELARVNYQRAEQLVDQGVQPRQELDDKKRDRNQAIAARDAAAQALSASKEAL 246

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N          A   +             +   + + + ++  +   +++PI G +V + 
Sbjct: 247 NVAQQRVQAAQATEAR--------VAANLSSARADVEVKQEELQFNRVVAPIDG-VVGDI 297

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                +YA     L  I   ++   +   +  +Q + ++ G T  +R     D       
Sbjct: 298 LVKVGDYANVGDTLTTIT-QNQTLEVEIPIDEQQKERIRPGLTVELRNQGIPDTEPPIAT 356

Query: 365 AIIEKIDPIISQQDNNLQT 383
             I  I P +++    L T
Sbjct: 357 GQISFISPQVTKNSQTLLT 375


>gi|171911891|ref|ZP_02927361.1| efflux transporter, RND family, MFP subunit [Verrucomicrobium
           spinosum DSM 4136]
          Length = 447

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 83/244 (34%), Gaps = 35/244 (14%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L+ ++   RA ++S    +  ++   ++   S N L    RI               +  
Sbjct: 120 LQQQTESSRASVASANAKVAQVQATVKEAEASLNRLRDLHRISNGKMP--------AQAD 171

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           L       D A             DL   + +  +  +++ I E+  E+  I SPI G +
Sbjct: 172 LDTATATMDRAK-----------ADLLTAEASVKEAEAQVKINERDLEKAVIKSPIDGIV 220

Query: 301 VYNQSFSSSNYAQQ---SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           +  +S            +  L  +  + +L  +   V    I  V+ G  AT     + +
Sbjct: 221 LT-RSLEPGQTVAASFTAPELFVLAENLELMELNVAVAEADIGRVEAGQKATFTVDAWPE 279

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                F A + ++       DN         V+   T+L  S+ ++ LR G  A      
Sbjct: 280 R---SFSANVRRVSFGSVITDN---------VVTYQTELEVSNKDLSLRPGMTATADIHV 327

Query: 418 KNTT 421
             +T
Sbjct: 328 AEST 331



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 76/249 (30%), Gaps = 31/249 (12%)

Query: 19  RMTLLSIIGIIGLITWSIL--------------------LPIEISVSSSGEILNEDNVVE 58
           R+ L+ ++      TW                         I ++V+++G +    N V 
Sbjct: 28  RLVLIVLLIGAAAGTWYWWRLQQQAQNQISPYTTEEVRKGEIRLTVTATGNLEP-TNEVT 86

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I S  SG   +  V+   ++ +G PL   +  +     +  + S+ +    +   ++ + 
Sbjct: 87  IGSELSGTTLEVYVDINDRVKKGQPLAKLDTSKLQQQTESSRASVASANAKVAQVQATVK 146

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                 + L           L  +           +   +++ R+    LT   S+    
Sbjct: 147 EAEASLNRLRD---------LHRISNGKMPAQADLDTATATMDRAKADLLTAEASVKEAE 197

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-NIHEQ 237
             ++     L   +     D  ++    E            E  V    LEL E N+   
Sbjct: 198 AQVKINERDLEKAVIKSPIDGIVLTRSLEPGQTVAASFTAPELFVLAENLELMELNVAVA 257

Query: 238 KNMLRHINE 246
           +  +  +  
Sbjct: 258 EADIGRVEA 266


>gi|116621754|ref|YP_823910.1| RND family efflux transporter MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116224916|gb|ABJ83625.1| efflux transporter, RND family, MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 402

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 59/407 (14%), Positives = 128/407 (31%), Gaps = 106/407 (26%)

Query: 26  IGIIGLITWS----------ILLP-----IEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +G+  +I W                    +  ++ ++G++        +++  SG++ + 
Sbjct: 11  VGLAAVIVWGILRKSEPPKVAFARAKRQTLVSTLPTNGKVEPFAW-QAVRAETSGVVSRV 69

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            VE+G  I  G  + T  D+              +L+  I+  ++ +       + LE  
Sbjct: 70  AVEDGQTIAAGAVIATITDV--------------SLQADIEAAQAKVSETAANLNALEAG 115

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +  E                                            ++EN  +  R 
Sbjct: 116 GKPSEF------------------------------------------TEIENSLARSRF 133

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L   QK L  ++ L  K+A +Q +++     V +S LE+      +K+++         
Sbjct: 134 DLDQAQKTLASLERLAAKHAATQQEVDSARDKVRQSELEIAGLDKRRKSLVS-------- 185

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                         ++   +   AD  S L + ++      I +PI+GT+   +     +
Sbjct: 186 ------------PPEVAVARARLADAESALHLAQQRGALSIIHAPISGTVYGREVR-QGS 232

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           Y      +  I        +R  V   ++  V +G   T+ +      +   ++  +EK 
Sbjct: 233 YVNAGDLITNIG-RMDQMRVRVYVDEPELGRVAEGQPVTITWDALPGRQ---WQGKVEK- 287

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            P+  Q   + Q  E   V          +  + L  G         
Sbjct: 288 KPVAIQALGSRQVGEVVCV--------IGNEGLALIPGTNVNAEIRT 326


>gi|90415670|ref|ZP_01223604.1| putative multidrag resistance protein [marine gamma proteobacterium
           HTCC2207]
 gi|90332993|gb|EAS48163.1| putative multidrag resistance protein [marine gamma proteobacterium
           HTCC2207]
          Length = 359

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 86/265 (32%), Gaps = 24/265 (9%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            ++     ++    +   V     ++   +    L +      ++      +    +   
Sbjct: 38  AYLKAGMLSIASEISGKVVEVSVADNGRVEAGQLLFRVDDQPYQIALARAEANLIKVGGD 97

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           +  +++ YLN+L         +     + ++   + +L  +  VS  +++Q E +   S 
Sbjct: 98  VESLKADYLNKL---ADLEQSKTQHDFYLREFNRLNSLLARKTVSAAEVDQAEYLYLDSI 154

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            E+               ++  +A       L +I   L+Q+         +        
Sbjct: 155 NEM---------------QVTTQALQVVKARLIDIDLPLQQHPSYLLALAER-DKARLDL 198

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               I++P +G +          Y     PL  +V      ++ A      + H++ G  
Sbjct: 199 SHVRIVAPSSGVVANFSIH-KGEYIIAGAPLFSLV-DDSYIWVEANFKETDLTHLQVGQP 256

Query: 348 ATVRFPHYADIREKKFKAIIEKIDP 372
           AT+    Y D +   ++  +  I P
Sbjct: 257 ATIEVDAYPDQQ---WQGHVSSITP 278



 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 56/152 (36%), Gaps = 9/152 (5%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I S  SG + +  V +  ++  G  L   +D          ++++     ++      ++
Sbjct: 47  IASEISGKVVEVSVADNGRVEAGQLLFRVDD-------QPYQIALARAEANLIKVGGDVE 99

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY--RSLKMKLTRMRSIYL 176
            L   Y       E  + Q   +L +++   S +    +S+    ++  + L  +  + +
Sbjct: 100 SLKADYLNKLADLEQSKTQHDFYLREFNRLNSLLARKTVSAAEVDQAEYLYLDSINEMQV 159

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
               L+   + L  +    Q+  + +  L E+
Sbjct: 160 TTQALQVVKARLIDIDLPLQQHPSYLLALAER 191


>gi|330995808|ref|ZP_08319705.1| hypothetical protein HMPREF9442_00774 [Paraprevotella xylaniphila
           YIT 11841]
 gi|329574538|gb|EGG56103.1| hypothetical protein HMPREF9442_00774 [Paraprevotella xylaniphila
           YIT 11841]
          Length = 326

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 52/253 (20%), Positives = 91/253 (35%), Gaps = 39/253 (15%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               +MRSI   R D+  + +  R  ++  + +     NL  +NA +Q  ++  E  +  
Sbjct: 105 QLEAQMRSIGSRRADVAKQVAATREQIAKAELERKRSLNLLAQNAGTQKQVDDVESQLAV 164

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
              +L   +       + + E  D A ++                             E 
Sbjct: 165 LKKQLEAQLSTLNLGNQGVTEEGDAAEIQIRQ-------------------------TED 199

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             E+  I+SPI+GT++  +         Q +PL K V   K  ++RA V   Q+  VK G
Sbjct: 200 QLEKCRIVSPISGTVLT-KYAERGEVTAQGKPLFK-VADMKHVFLRAYVGGDQLSAVKLG 257

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSD 400
               V +  Y     K++K  I  I         + Q  + +    Y V + + +  F  
Sbjct: 258 QAVKV-YADYGAEDRKEYKGKITWISGQAEFTPKTIQTRDERANLVYAVKIAVENDGF-- 314

Query: 401 NNIELRNGFPAEV 413
               L+ G   EV
Sbjct: 315 ----LKLGMYGEV 323



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 64/202 (31%), Gaps = 33/202 (16%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           I G   L  ++     +    ++G  + E   V + S  +G I    +E G  +  G  +
Sbjct: 34  ICGAALLGLFAACSGADTDFDATG--IFESTEVIVSSEANGKIMALNLEEGDVLELGQQV 91

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
              + ++                         L     + +   ++  SR   +   +  
Sbjct: 92  GYVDSVQ-------------------------LHLKKCQLEAQMRSIGSRRADVAKQVAA 126

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT-MMK 203
                +K       S+       L +         D+E++ ++L+  L +    L    +
Sbjct: 127 TREQIAKAELERKRSL-----NLLAQNAGTQKQVDDVESQLAVLKKQLEAQLSTLNLGNQ 181

Query: 204 NLFEKNAVSQNDLNQQERIVYK 225
            + E+   ++  + Q E  + K
Sbjct: 182 GVTEEGDAAEIQIRQTEDQLEK 203


>gi|254409764|ref|ZP_05023545.1| hypothetical protein MC7420_7397 [Microcoleus chthonoplastes PCC
           7420]
 gi|196183761|gb|EDX78744.1| hypothetical protein MC7420_7397 [Microcoleus chthonoplastes PCC
           7420]
          Length = 309

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 107/303 (35%), Gaps = 40/303 (13%)

Query: 147 STCSKVFNYGISSVYRSLKMKLT--RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              ++     I     S+    +  +++++  +   L  K   L A L   Q+ L  +K 
Sbjct: 5   EDNARQAANRIQHELASIHQGNSPPQIQALERDIEGLYQKKEQLSASLKIRQQRLKTIKA 64

Query: 205 LFEK---NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           + ++   + +    +++     Y    EL E           I  +  E N +      E
Sbjct: 65  VNQEAGSSVIPAIRVDELLDDTYSRQGELAELTSLIDRKQAQIQSIVKELNDKLTRAKAE 124

Query: 262 ISRD-----------------LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI---- 300
           ++                   ++  QR   +  +++      R+Q  +++   GT+    
Sbjct: 125 LNAATAARISVEENLNAAQLVVKDRQRQIQELAAEVQRQLSRRDQLILVADTTGTVTTED 184

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           +     +        Q +M+IV  S LT I AK+  +  + + +G    V+F  Y     
Sbjct: 185 LDLLENTWH---PAGQKIMEIVDLSDLTVI-AKIRQEDEKFILQGDQ--VKF--YKQGEL 236

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + +   +E I   +   +N  Q +  + V L IT    +D    ++ G    V    +  
Sbjct: 237 QPYTTAVENISSALKSDEN--QIKPIWTVRLSIT----NDETNPMKPGMTGYVAIETRPM 290

Query: 421 TLA 423
           TL 
Sbjct: 291 TLF 293


>gi|146338095|ref|YP_001203143.1| putative signal peptide [Bradyrhizobium sp. ORS278]
 gi|146190901|emb|CAL74906.1| conserved hypothetical protein; putative signal peptide
           [Bradyrhizobium sp. ORS278]
          Length = 339

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 116/333 (34%), Gaps = 30/333 (9%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +    + L           +A  ++EE+ L          S +   G+  V    ++ 
Sbjct: 12  ALLLAASTVLAAAPRLITQEARAANAQEERWLAVAPGRVEPASGLIKLGVPVVGAIQEVL 71

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK-----NAVSQND----LNQ 218
           +    S++  +  +    +  RA L+S +    M K +  K      A  +      +  
Sbjct: 72  VKPGDSVFAGQALVRLSDAEARAQLASAEAQAAMRKRVRNKETTPSGAGPRRRAEDGVAD 131

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE-- 276
            +  V+ + + L + + E +   R  +   + A  +  N   ++ +  E+ ++  AD   
Sbjct: 132 AQAAVFDARVALDKAVAE-RRAGRGADADVESARTQATNAQAKLEQQTEELRKVTADAPL 190

Query: 277 -----------MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVP 323
                       + L     T E+ T+ +P+ GTI+   + +    A    SQPL+ +  
Sbjct: 191 PIGAEGQLNVARADLQAARATLEKLTLRAPLDGTILQVNARA-GEIASPQGSQPLVLLG- 248

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 +RA++  + +  +K G  A VR   +   R +     +  + P++        +
Sbjct: 249 DMSSLRVRAELDQRDLDKIKVGQQAVVRSDAF---RGRDVAGKVASVAPLVESSRTAALS 305

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           Q     +  +  L           G   +V F 
Sbjct: 306 QRNMTDVDVVEVLVDLAEPGPFAVGMKVDVYFR 338



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 72/253 (28%), Gaps = 15/253 (5%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
             + G +     ++++  P  G I++  V+ G  +  G  L+   D E    +       
Sbjct: 44  AVAPGRVEPASGLIKLGVPVVGAIQEVLVKPGDSVFAGQALVRLSDAEARAQL------- 96

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                  + + +    + NK      A   R  +      +     ++V      +  R+
Sbjct: 97  ----ASAEAQAAMRKRVRNKETTPSGAGPRRRAEDGVADAQAAVFDARVALDKAVAERRA 152

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            +     + S      + + K       L     D  +      +  V++ DL      +
Sbjct: 153 GRGADADVESARTQATNAQAKLEQQTEELRKVTADAPLPIGAEGQLNVARADLQAARATL 212

Query: 224 YKSTLE--LRENIHEQKNMLRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSK 279
            K TL   L   I +       I        L     +    +  +L+Q          +
Sbjct: 213 EKLTLRAPLDGTILQVNARAGEIASPQGSQPLVLLGDMSSLRVRAELDQRDLDKIKVGQQ 272

Query: 280 LTILEKTREQKTI 292
             +       + +
Sbjct: 273 AVVRSDAFRGRDV 285


>gi|332678989|gb|AEE88118.1| RND efflux membrane fusion protein [Francisella cf. novicida Fx1]
          Length = 356

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)

Query: 242 RHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +Y++A +E  NY +E+++   DL + +   A + S+L           + +P  G
Sbjct: 135 ASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL-----------VKAPSDG 183

Query: 299 TIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT-------- 349
            IV  +         + +  L  IVP SK   +   V    +  VK G            
Sbjct: 184 VIVD-RIHGLGGVIVKDTDVLATIVPDSKSRIVELWVNSMDVPLVKIGDKVMLQFEGWPA 242

Query: 350 VRFPHYADIREKKFKAIIEKIDP 372
           V+F  +  +    F+  +  I P
Sbjct: 243 VQFSGWPQVAIGTFEGEVIFISP 265



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLK---KVS 102
            +   +    I +P  G + K+ V  G  + +G P++     +    + L + K   ++ 
Sbjct: 50  TLSPSERQQNISAPIGGRLGKWYVFEGDSVKKGDPIVEVLDLDPEVVSRLEEEKSAIELG 109

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I +++  I   K+ ++   +KY V + A   R  +        ++      N  ++ V  
Sbjct: 110 INSVKLAIKNTKNNIE--RHKYLVDKGASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKV 167

Query: 163 SLKMKLTRM 171
            +  + +R+
Sbjct: 168 QIARQQSRL 176


>gi|118498253|ref|YP_899303.1| membrane fusion protein [Francisella tularensis subsp. novicida
           U112]
 gi|194324437|ref|ZP_03058210.1| hypothetical membrane protein [Francisella tularensis subsp.
           novicida FTE]
 gi|208780280|ref|ZP_03247622.1| membrane fusion protein [Francisella novicida FTG]
 gi|118424159|gb|ABK90549.1| membrane fusion protein [Francisella novicida U112]
 gi|194321502|gb|EDX18987.1| hypothetical membrane protein [Francisella tularensis subsp.
           novicida FTE]
 gi|208743929|gb|EDZ90231.1| membrane fusion protein [Francisella novicida FTG]
          Length = 356

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)

Query: 242 RHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +Y++A +E  NY +E+++   DL + +   A + S+L           + +P  G
Sbjct: 135 ASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL-----------VKAPSDG 183

Query: 299 TIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT-------- 349
            IV  +         + +  L  IVP SK   +   V    +  VK G            
Sbjct: 184 VIVD-RIHGLGGVIVKDTDVLATIVPDSKSRIVELWVNSMDVPLVKIGDKVMLQFEGWPA 242

Query: 350 VRFPHYADIREKKFKAIIEKIDP 372
           V+F  +  +    F+  +  I P
Sbjct: 243 VQFSGWPQVAIGTFEGEVIFISP 265



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLK---KVS 102
            +   +    I +P  G + K+ V  G  + +G P++     +    + L + K   ++ 
Sbjct: 50  TLSPSERQQNISAPIGGRLGKWYVFEGDSVKKGDPIVEVLDLDPEVVSRLEEEKSAIELG 109

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I +++  I   K+ ++   +KY V + A   R  +        ++      N  ++ V  
Sbjct: 110 INSVKLAIKNTKNNIE--RHKYLVDKGASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKV 167

Query: 163 SLKMKLTRM 171
            +  + +R+
Sbjct: 168 QIARQQSRL 176


>gi|288961873|ref|YP_003452183.1| secretion protein domain protein [Azospirillum sp. B510]
 gi|288914153|dbj|BAI75639.1| secretion protein domain protein [Azospirillum sp. B510]
          Length = 381

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 81/278 (29%), Gaps = 33/278 (11%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +V +   + +  + ++  TR  +        + +++  R       + +   K L  +  
Sbjct: 125 RVRDAEAALLKAAQRLDETRTWTTGAEMARAQRQAAAARREAEQALRRVQDAKPLIAQGI 184

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + + +    +R      L                           A   +     +   +
Sbjct: 185 IPRQEYEDLQRQADAQGL-----------------NRVAAEEELAATAKRGGPDAVRMAE 227

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIV-----------YNQSFSSSNYAQQSQPLM 319
              A  ++K   L +  E+  + +P +G I+              +        Q+Q L 
Sbjct: 228 LEHASALAKAEDLRRQLERAVVKAPASGMIMKAPTASSANASGVTAIEVGAGLSQNQSLF 287

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I     L  + A+V    +  ++ G    +    + D         +  I    +  + 
Sbjct: 288 MIAEMDSLAVV-AQVDEMDVNRLRVGQPVDITGDAFPDN---PLSGQVAWIAQQATVAEG 343

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                  + V + ++ L+ +     +R G  A +    
Sbjct: 344 GASPGASFAVRVALSPLSDAQKQ-RIRVGMSATLTVGT 380


>gi|260430482|ref|ZP_05784455.1| secretion protein, HlyD family [Citreicella sp. SE45]
 gi|260418511|gb|EEX11768.1| secretion protein, HlyD family [Citreicella sp. SE45]
          Length = 334

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/319 (14%), Positives = 95/319 (29%), Gaps = 36/319 (11%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L+ ++ T    +    ++  V E A  S  + L            +     +    +   
Sbjct: 38  LKANVLTIAPQVGGRVSEVAVAENAHVSAGDLLFTIDAAELEATVQSAQANLDRARQQTT 97

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
             +T + +   N           RA LS  Q      + LF    V Q            
Sbjct: 98  AAITDLSAASAN-------VDSARAALSEAQDAYGRTEKLFTMGDVPQ------------ 138

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
                     +           +D AN   A   ++     + N    A E ++LT+ + 
Sbjct: 139 ------AARDQAAMTRDQAQAAFDSANAALAASREQAGAPGDDNPAVRAAE-AQLTLAQI 191

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 + +P++G I              + PL  +V      +I A      ++ ++ G
Sbjct: 192 NLNHARVTAPVSGWIANLDVR-PGALVSPNAPLFSLV-EDGDWWIDANFKETDLERLRPG 249

Query: 346 YTATVRFPHYADIR-EKKFK------AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
               +    Y  +      +        +  + P  +   N ++  + + V + I D   
Sbjct: 250 QPVNIDIDMYPGVTLTGTLQSLGAGAGAVFSLLPPQNASGNWVKVTQRFPVRIAI-DTRP 308

Query: 399 SDNNIELRNGFPAEVLFTA 417
            D +++LR G    V    
Sbjct: 309 DDPDLQLRVGASTTVTVDT 327



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 60/195 (30%), Gaps = 9/195 (4%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           LK + L++ I + G   W      E    S+ +   + NV+ I     G + +  V   +
Sbjct: 4   LKAIVLVAAIALAGGGLWVWWQH-ERIHPSTDDAYLKANVLTIAPQVGGRVSEVAVAENA 62

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G  L T +  E    +   + ++   R       + L   +   D    A    ++
Sbjct: 63  HVSAGDLLFTIDAAELEATVQSAQANLDRARQQTTAAITDLSAASANVDSARAALSEAQD 122

Query: 137 QL--------LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                     +  + +     + +      + + S    L   R       D        
Sbjct: 123 AYGRTEKLFTMGDVPQAARDQAAMTRDQAQAAFDSANAALAASREQAGAPGDDNPAVRAA 182

Query: 189 RALLSSHQKDLTMMK 203
            A L+  Q +L   +
Sbjct: 183 EAQLTLAQINLNHAR 197


>gi|225871711|ref|YP_002753165.1| multidrug resistance protein MdtN [Acidobacterium capsulatum ATCC
           51196]
 gi|225794442|gb|ACO34532.1| multidrug resistance protein MdtN [Acidobacterium capsulatum ATCC
           51196]
          Length = 413

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 102/324 (31%), Gaps = 40/324 (12%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V +   + QG  LL  ++      + L +     L   I  E   +       
Sbjct: 60  GPIMQLNVVDNEYVKQGQLLLDIDERPYAYALKLARSDQAALEGKILDEGRTI------- 112

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                 S+   V   G+ S   SL      ++       D +  
Sbjct: 113 -------------------ASQSSAVSVSQAGVKSAQASLTRADAAVQEARAQVADAKAA 153

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNML 241
            +  +A L+    +L  ++ L  K  V+ + ++Q    E    ++  E +         L
Sbjct: 154 LARTKAELAYATHNLHRIEPLLAKQYVTVDQVDQARTLEATRQQAYNEAQAQQALAAAQL 213

Query: 242 RHINELYDEANLEFANYLKEISRD------LEQNQRTFADEMSKLTILEKTREQKTILSP 295
                   +A         ++ +       L+      +   S +   E   E   I +P
Sbjct: 214 ASSMAQQQQAQALLQQSQAQVKQAAHAVLTLDPLLAQRSGATSAIETAEYNLENCKIYAP 273

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G +      S   YA   Q +  ++  +++ ++ A     Q+ H++ G  A V     
Sbjct: 274 FDGRVTNLTI-SQGEYAHAGQQIFTLI-DTRVWWVVANFRETQLAHIRPGMRADVYILSR 331

Query: 356 ADIREKKFKAIIEKIDPIISQQDN 379
            D+R      +++ +   ++   +
Sbjct: 332 PDLR---LHGVVDSVGYGVTPDAD 352


>gi|221198720|ref|ZP_03571765.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD2M]
 gi|221204982|ref|ZP_03577998.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD2]
 gi|221174773|gb|EEE07204.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD2]
 gi|221181171|gb|EEE13573.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD2M]
          Length = 467

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/363 (9%), Positives = 102/363 (28%), Gaps = 72/363 (19%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  +  ++++ ++G + W          +       + N + +    SG +
Sbjct: 121 ERKRPGRKPLIILGAIALLLVVGGLVW-WFATRNQESTDDAY--TDGNAIAVAPHVSGYV 177

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V++   + +G  L+  +  +    +D  +  +      +D  +  LD    +Y   
Sbjct: 178 TRLAVDDNVYVHRGDVLVEIDPRDYRAQVDAARAQLGLAEAQLDAARVQLDIARVQYPAQ 237

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +   ++ E       +  +  ++     + +  +         R+     + +    + 
Sbjct: 238 YRQARAQIESAEAAYRQALAAQARQRAVDVRATSQQAIDAADAQRASADANVAMAQAQAR 297

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             +L+                                       + I + + ++    + 
Sbjct: 298 TASLVP--------------------------------------QQIRQAETVVEERRQQ 319

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +A  +                             E      T+ +P  G +       
Sbjct: 320 VLQARAQLEQ-------------------------AELNLAYCTMRAPSDGWVTRRNV-Q 353

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             ++ Q    +  IV  +   +I A     Q++ ++ G    V    Y D+        +
Sbjct: 354 LGSFLQPGTSIFSIV--TPRVWITANFKESQLKRMRVGDRVDVSVDAYPDL---DLHGHV 408

Query: 368 EKI 370
           + I
Sbjct: 409 DSI 411


>gi|218130793|ref|ZP_03459597.1| hypothetical protein BACEGG_02387 [Bacteroides eggerthii DSM 20697]
 gi|317474314|ref|ZP_07933590.1| efflux transporter [Bacteroides eggerthii 1_2_48FAA]
 gi|217987137|gb|EEC53468.1| hypothetical protein BACEGG_02387 [Bacteroides eggerthii DSM 20697]
 gi|316909624|gb|EFV31302.1| efflux transporter [Bacteroides eggerthii 1_2_48FAA]
          Length = 409

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 70/221 (31%), Gaps = 18/221 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDL 266
             +++ D    +  V            E +   ++        E  L      ++   + 
Sbjct: 86  QLIAEMDRVTLQSEVASQRAAYNGAKAEYEYQQKNYERNRGLHEKQLISDTDYEQSVYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ +  +    + L   E+     TI SPI G +V N++               L  I  
Sbjct: 146 EKAKSNYESSQASLAKAERNLSYATITSPIDG-VVINRAVEEGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI----DPIISQQDN 379
                 + A V    I  V++G   +     Y +     F+  + +I    D   S   +
Sbjct: 205 DLTQMQVVADVDEADIGGVEEGQRVSFTVDAYPNDT---FEGTVTQIRLGEDSSTSSGSS 261

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              T   YEV++        + +++L+    A V     + 
Sbjct: 262 TSSTVVTYEVVISAP-----NPDLKLKPRLTANVTIYTLDR 297



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 66/183 (36%), Gaps = 18/183 (9%)

Query: 20  MTLLSIIGIIGLITW---------------SILL--PIEISVSSSGEILNEDNVVEIKSP 62
           +  +SI  + G   W               +++    I  S++++G I     V E+ + 
Sbjct: 8   LIAVSIAVVAGAGFWLFGSSKAQHKVTYETAVVTRGEISESITATGTIEPVTEV-EVGTQ 66

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SGII K   +  S + +G  +   + +     +  ++ +    +   + ++   +    
Sbjct: 67  VSGIIDKIYADYNSVVTKGQLIAEMDRVTLQSEVASQRAAYNGAKAEYEYQQKNYERNRG 126

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            ++    +    E+ + ++     +  S   +   +    S     + +  + +NR   E
Sbjct: 127 LHEKQLISDTDYEQSVYNYEKAKSNYESSQASLAKAERNLSYATITSPIDGVVINRAVEE 186

Query: 183 NKS 185
            ++
Sbjct: 187 GQT 189


>gi|22124830|ref|NP_668253.1| multidrug resistance protein A [Yersinia pestis KIM 10]
 gi|45440515|ref|NP_992054.1| multidrug resistance protein A [Yersinia pestis biovar Microtus
           str. 91001]
 gi|21957658|gb|AAM84504.1|AE013695_6 multidrug resistance secretion protein [Yersinia pestis KIM 10]
 gi|45435372|gb|AAS60931.1| multidrug resistance protein A [Yersinia pestis biovar Microtus
           str. 91001]
          Length = 394

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 86/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +   +L +  LS  Q DL     L     + +
Sbjct: 102 EQAFEQAKTALANSVRQTHQLIINSKQYQANIALKKTELSQAQNDLKRRVVLGAAAVIGR 161

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +   L                  D A  ++      +     + Q   
Sbjct: 162 EELQHARDAVEAAQASL------------------DMAVQQYNANQALVLNTPLEKQPAI 203

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+     T ++  ++SPI+G +   +S           PLM +VP     +I A 
Sbjct: 204 EQAAAKMRDAWLTLQRTKVVSPISGYVSR-RSVQVGAEISSGTPLMAVVPAD-QLWIDAN 261

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G  AT+    Y D     ++  +  +D          P  +   N ++ 
Sbjct: 262 FKETQLANMRIGQPATIVTDFYGDDV--VYQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 319

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V + + +    ++ + +
Sbjct: 320 VQRLPVRIALDEKQLKEHPLRI 341



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 59/174 (33%), Gaps = 10/174 (5%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH--- 109
             N V+I S   G +     EN   +  G  L+T +  +     +  K ++ N       
Sbjct: 62  SGNQVQIMSQVPGSVVSVHFENTDFVKSGDVLVTLDPTDAEQAFEQAKTALANSVRQTHQ 121

Query: 110 --IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             I++++   +    K ++ +   + +   +L           +     + +   SL M 
Sbjct: 122 LIINSKQYQANIALKKTELSQAQNDLKRRVVLGAAAVIGREELQHARDAVEAAQASLDMA 181

Query: 168 LTR--MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF---EKNAVSQNDL 216
           + +       +    LE + ++ +A        LT+ +          VS+  +
Sbjct: 182 VQQYNANQALVLNTPLEKQPAIEQAAAKMRDAWLTLQRTKVVSPISGYVSRRSV 235


>gi|223935478|ref|ZP_03627395.1| efflux transporter, RND family, MFP subunit [bacterium Ellin514]
 gi|223895888|gb|EEF62332.1| efflux transporter, RND family, MFP subunit [bacterium Ellin514]
          Length = 640

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 95/270 (35%), Gaps = 35/270 (12%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +       E+   + +  +S  +  L   + LF K  V++ +L   E       L+++ 
Sbjct: 284 EMKQKIRKNEDDLQVAQKEMSQAKTQLEGTQRLFGKGFVTKTELEGDEFKYENCRLKVQT 343

Query: 233 NIHEQKNMLR-HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK------ 285
               +   ++    +  +EA  ++   ++E+ R  +      A   +KL   E       
Sbjct: 344 ADTARNLFIKYEFPKTCEEALSKYVEAVRELDRTRKGAISKLAQAEAKLRSAEGRYKLEL 403

Query: 286 --------TREQKTILSPIAGTIV------------YNQSFSSSNYAQQSQPLMKIVPHS 325
                      + TI +   G +V              +        ++ QP++ I P  
Sbjct: 404 HQRSDLLGQMGKCTIKAQKPGLVVYGGGNMNAYYYGGEEQVREGALVREQQPIITI-PDM 462

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               ++ ++    I+ +KKG  A +    + D   KK    I K+  +   Q+  +    
Sbjct: 463 TKMAVKVRIHETYIKKIKKGQKARITVEAFPD---KKLMGEISKVAVLPDSQNMWMNPD- 518

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              + + +T +  S+    ++ G  ++V  
Sbjct: 519 ---MKVYLTTITISEVQDWIKPGMSSKVEI 545


>gi|17232785|ref|NP_489333.1| hypothetical protein alr5293 [Nostoc sp. PCC 7120]
 gi|17134432|dbj|BAB76992.1| alr5293 [Nostoc sp. PCC 7120]
          Length = 471

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 70/228 (30%), Gaps = 27/228 (11%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           + +  +      L    + +        +   +    R  +   + D    + LF++ A+
Sbjct: 141 ILSTNLKQAEAELAALQSEVARATTQVSNARAQVERARLEVVQAEADAQRQERLFKEGAI 200

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S+    Q       +T  LR    + +   + +         + A   +           
Sbjct: 201 SEQAAEQARTEAKTATQALRAATEQVRTEEQAVAAAKGRVFAQQAVVAQ----------- 249

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                       ++ R    + SP+ G I   +     N  Q    ++KI   S++  + 
Sbjct: 250 -----------TKERRSYTRLTSPLNGVITE-RVTEPGNLLQAGGEILKIADLSRIKVV- 296

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +V+  ++  ++ G +  VR   + D         + +I P       
Sbjct: 297 VQVSELELGEIQVGQSVQVRLDAFPDQT---IIGRVTRISPTADATAR 341



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 13/144 (9%), Positives = 53/144 (36%), Gaps = 5/144 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDF 119
           G +    ++ G  + +G  +   +DI  +  +   +  +  L     R       +    
Sbjct: 115 GRLLALNLDVGDTVKRGQNVGQLDDIILSTNLKQAEAELAALQSEVARATTQVSNARAQV 174

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + +V++   +++ ++ L   G      ++       +  ++L+    ++R+      
Sbjct: 175 ERARLEVVQAEADAQRQERLFKEGAISEQAAEQARTEAKTATQALRAATEQVRTEEQAVA 234

Query: 180 DLENKSSLLRALLSSHQKDLTMMK 203
             + +    +A+++  ++  +  +
Sbjct: 235 AAKGRVFAQQAVVAQTKERRSYTR 258


>gi|213963167|ref|ZP_03391425.1| efflux transporter, RND family, MFP subunit [Capnocytophaga
           sputigena Capno]
 gi|213954251|gb|EEB65575.1| efflux transporter, RND family, MFP subunit [Capnocytophaga
           sputigena Capno]
          Length = 415

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 79/233 (33%), Gaps = 19/233 (8%)

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + +++ +++A S   +    +    +  E  E+    K +      +  +++ + A   
Sbjct: 96  DIYQSVVKRSAASLETVRASLQQSAATLKEAEESYKRNKVLYEK--GVISKSDWDKAVSA 153

Query: 260 KEISRDLEQNQR-TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----Q 314
            E+++   ++ R      M+ ++  +   ++  I SP  GTI                  
Sbjct: 154 YEVAKASRESARFNVQSAMASVSEAQDNLKKTIIYSPTDGTISKLSVELGERVVGTMQMT 213

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              +M+ V +     +   V    I  +  G +  V    Y    ++ FK  +  I    
Sbjct: 214 GTEIMR-VANLHNMEVEVDVNENDIVKISVGDSVNVEVDAY---LKRVFKGRVTNIANTA 269

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSD-------NNIELRNGFPAEVLFTAKNT 420
           +   +  Q   + +V + I + ++ D            R G  A V    K  
Sbjct: 270 NTTTSVDQVTNF-KVKIHIEETSYKDLLEGKPAGYSPFRPGMTATVDILTKTK 321



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 1/81 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS++G+I  E  +  + S  SG I +  V+ G  + +G  L+         ++     S+
Sbjct: 51  VSATGKIQPELEIK-LSSEVSGEIIELPVKEGQMVKKGDLLVRINPDIYQSVVKRSAASL 109

Query: 104 KNLRCHIDTEKSALDFLNNKY 124
           + +R  +    + L      Y
Sbjct: 110 ETVRASLQQSAATLKEAEESY 130


>gi|156743094|ref|YP_001433223.1| secretion protein HlyD family protein [Roseiflexus castenholzii DSM
           13941]
 gi|156234422|gb|ABU59205.1| secretion protein HlyD family protein [Roseiflexus castenholzii DSM
           13941]
          Length = 533

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 44/351 (12%), Positives = 108/351 (30%), Gaps = 54/351 (15%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V  G  + +G  L   +  E  D +   +  +   R  +++ + A +    + 
Sbjct: 76  GRVNVVNVSRGDVVKEGDVLAELQQEEALDELRRAEDDLAQARRDLESAQLAKEKRIKER 135

Query: 125 DV--------LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           ++        LE+     E  L   L +      +           S       +R    
Sbjct: 136 ELDVDRARRELERLLPGGEADLFKELQERLEAAQRELRTTRDDASWSKTSADEALRDSAE 195

Query: 177 NRLDLENKSS---------------------------LLRALLSSHQKDLTMMKNLFEKN 209
              D +   S                           L+   L+  QK+   MK +  + 
Sbjct: 196 ALSDTQKAYSVAYWNWDWVQRYGTDPENPFIKNEAGVLVPNRLTEKQKEEFRMKLVQAER 255

Query: 210 AVSQNDLNQQERIVYKSTL---------ELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           A+   + + ++    +            E  + + E +  L  + +  ++A  +    L+
Sbjct: 256 ALRDAERSVEQAQRARDRAYEDEVVKIYEAEKKVEEAQRALETLLQGKNKAIEDAQLALE 315

Query: 261 EISRDLEQNQ--------RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                LE+ +        R   +    L    +  +   +++P  GT++           
Sbjct: 316 RAQVALEEARNETLNSALRAVENAERALEKARRRVDDGRVIAPQDGTVLAVAI-EPGATV 374

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +P+++I          A ++ +Q++ + +G +  +R     D+     
Sbjct: 375 TAFEPVIEIA-DPSNLEFAATLSAQQMRLLSEGQSVEIRLLSRPDLVIPGV 424


>gi|77462789|ref|YP_352293.1| membrane fusion protein (MFP) family protein [Rhodobacter
           sphaeroides 2.4.1]
 gi|77387207|gb|ABA78392.1| Membrane Fusion Protein (MFP) Family protein [Rhodobacter
           sphaeroides 2.4.1]
          Length = 368

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 71/257 (27%), Gaps = 26/257 (10%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            +  + +     + +  L     +    +L   + L +K   S   L+       ++   
Sbjct: 116 EVEQLRVAYAQAQAQEKLAADDAAYLANELERQQALSQKGVASTTSLDDARHESLRA--- 172

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                       + +  +  +        L  ++             ++          +
Sbjct: 173 ------------KELLLVARQTTASALAALGGVADGPVDEHPKVRTALAARDDAAYQLAR 220

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P  G +    SF         Q L  +V      +I A     Q+  +  G  A 
Sbjct: 221 TEVRAPADGIVYQAASFKPGQMVTAGQSLFSLVETGD-VWIDANFKETQLAGIAPGQKAE 279

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE----- 404
           V F  + D      +A +E +      + + L  Q      +K+T         E     
Sbjct: 280 VTFDLHPDRPY---EATVEAVGAGTGSEFSLLPAQNATGNWVKVTQRVPVRLRFEEGADI 336

Query: 405 --LRNGFPAEVLFTAKN 419
             L +G  AEV      
Sbjct: 337 AGLASGLSAEVSVDTGR 353



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/157 (9%), Positives = 47/157 (29%), Gaps = 5/157 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V +   + +G  L   +       +   + ++ + R  ++  + A      +
Sbjct: 71  SGRVTRVSVSDNRPVSKGEVLFEIDPEPHRIALAKAEAAVASARLEVEQLRVAYAQAQAQ 130

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +          +L     +     S+      +S+  +    L     + + R    +
Sbjct: 131 EKLAADDAAYLANEL-----ERQQALSQKGVASTTSLDDARHESLRAKELLLVARQTTAS 185

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             + L  +      +   ++        +   L + E
Sbjct: 186 ALAALGGVADGPVDEHPKVRTALAARDDAAYQLARTE 222


>gi|255008657|ref|ZP_05280783.1| HlyD family secretion protein [Bacteroides fragilis 3_1_12]
 gi|313146391|ref|ZP_07808584.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313135158|gb|EFR52518.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 407

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 17/220 (7%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDL 266
             +++ D    +  +            E +   ++        E  L      ++   + 
Sbjct: 86  QLIAEMDRVTLQSELASQRATYNGAKAEYEYQKKNYERSRGLHEKALISDTDYEQSLYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ + +F    + L   E+     TI SPI G ++  +                L  I  
Sbjct: 146 EKAKSSFESSQASLAKAERNLSYATITSPIDGVVIS-RDVEEGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNN 380
                 + A V    I  V++G  AT     Y +     F+  + +I   D   +   + 
Sbjct: 205 DLTQMQVVADVDEADIGGVEEGQRATFTVDAYPND---VFEGTVTQIRLGDASSTSTSST 261

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             T   YEV++     +  + +++L+    A V     + 
Sbjct: 262 STTVVTYEVVI-----SAHNPDLKLKPRLTANVTIYTLDR 296



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 57/148 (38%), Gaps = 1/148 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  SV+++G I     V E+ +  SGII K  V+  + + +G  +   + +     + 
Sbjct: 43  GEISESVTATGTIEPVTEV-EVGTQVSGIIDKIYVDYNAAVTKGQLIAEMDRVTLQSELA 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            ++ +    +   + +K   +     ++    +    E+ L ++     S  S   +   
Sbjct: 102 SQRATYNGAKAEYEYQKKNYERSRGLHEKALISDTDYEQSLYNYEKAKSSFESSQASLAK 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +    S     + +  + ++R   E ++
Sbjct: 162 AERNLSYATITSPIDGVVISRDVEEGQT 189


>gi|192290235|ref|YP_001990840.1| efflux transporter RND family, MFP subunit [Rhodopseudomonas
           palustris TIE-1]
 gi|192283984|gb|ACF00365.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
           palustris TIE-1]
          Length = 420

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 89/284 (31%), Gaps = 26/284 (9%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              S++       + +  +      + + +   +L+         ++  Q  +  ++ L 
Sbjct: 80  EIASQITGTVKDVLVKEGEQVHQGQQLVAIEASELQASVVQAEGAVAQAQARVRQLRELT 139

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHE----QKNMLRHINELYDEANLEFANYLKEI 262
           +  A       Q   +  ++  E    +       K  L    +  D A  +      ++
Sbjct: 140 KPAADEALKQAQANLLNAQAAYERASKLAASGYGTKATLDDATKNLDVARTQVRTAELQV 199

Query: 263 ------SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                   D    +   +  ++ L   +      TI++P  G ++  ++       Q  +
Sbjct: 200 FTTSPGGSDFVMAETQLSQALANLNTAQARLGYATIVAPRDG-VLITRNVERGTVVQPGK 258

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L+ + P   +  +  ++  K +  +  G  A      Y D   K+F A +  I+P +  
Sbjct: 259 ALLVLAPAGDIQIV-VQIDEKNLGQLALGQHAMASADAYPD---KRFDATLSYINPSVDI 314

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              ++      E+ LK+ D         LR      V       
Sbjct: 315 NRASV------EIKLKVDDPPDY-----LRQDMTVSVDIATARR 347



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 2/140 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  +V +SG I      VEI S  +G +K   V+ G Q+ QG  L+  E  E    + 
Sbjct: 61  GNLVQTVVASGHIETP-YRVEIASQITGTVKDVLVKEGEQVHQGQQLVAIEASELQASVV 119

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   +  +   +  L        + +        Q         +         +
Sbjct: 120 QAEGAVAQAQARVRQLR-ELTKPAADEALKQAQANLLNAQAAYERASKLAASGYGTKATL 178

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
               ++L +  T++R+  L 
Sbjct: 179 DDATKNLDVARTQVRTAELQ 198


>gi|187734616|ref|YP_001876728.1| efflux transporter, RND family, MFP subunit [Akkermansia
           muciniphila ATCC BAA-835]
 gi|187424668|gb|ACD03947.1| efflux transporter, RND family, MFP subunit [Akkermansia
           muciniphila ATCC BAA-835]
          Length = 465

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 101/327 (30%), Gaps = 37/327 (11%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +D +   ++     I  E + +   +   DV  +      E   D  GK     S V  
Sbjct: 31  QVDYQTEPLEKGNLMITIEATGVTEPDELVDVGAQVSGIIMEFGKDLNGKVVDYSSPVKA 90

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             + +    L ++L   R+        E   +   A ++  + D+   K   ++  + + 
Sbjct: 91  GQMLAEIDKLPVQLDVQRA--------EASKAQAIAGIARSKADIQQAKAKHQQARLDRE 142

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
              +       S     + I +++    ++                     L++ + +  
Sbjct: 143 RAEKLGPGDALSKSSYDQYIADEETARANVAVA---------------EASLQEAEASLK 187

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRA 332
              + L    +  E  TI SP+ G +V               +  L  I        I A
Sbjct: 188 QAEAALKKEMRNLEYTTIKSPVDGVVVKRLVNIGQTVVSSMSASSLFYIATDLSKLKIWA 247

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V    I  ++KG         +A  +   FK  ++KI    +   N         V+  
Sbjct: 248 AVNEADIGSIRKGQEVLFTVDAFAGRK---FKGTVDKIRLDATMTSN---------VVTY 295

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKN 419
           I D+   + +  L     A V F  ++
Sbjct: 296 IVDIDVPNPDKLLIPYLTANVQFVVED 322


>gi|54303458|ref|YP_133451.1| hypothetical protein PBPRB1792 [Photobacterium profundum SS9]
 gi|46916888|emb|CAG23651.1| hypothetical secretion protein [Photobacterium profundum SS9]
          Length = 390

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 93/283 (32%), Gaps = 44/283 (15%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH---QKDLTMMKNLFEKNAVSQND 215
           ++  + +  +   +S+ +    + +  + L   L++    +   T +  + +K  VS++D
Sbjct: 118 AIQEAEQGLVNAGKSVGVQTASIASAQAKLTDALANQAHLRAQATRILTMEKKGIVSKSD 177

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
            ++    +  +  ++       +   + +    +E                         
Sbjct: 178 ADKTRASLASAKAQVEAAQAGIEQAKKQLGSTGNEN-------------------SEVKS 218

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            + KL   +   ++  I +P  G +   +      YAQ  QPL   V   +  +I A   
Sbjct: 219 ALLKLQKAQLDLDRTVIRAPAIGGVTNFRLD-EGFYAQAGQPLFTFV-SGEDVWIDAYFR 276

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--------------PIISQQDNNL 381
              I ++K G +  +          + F   I  ID                ++ Q   L
Sbjct: 277 ENSIGNMKVGDSVDIVL---DYAPGRVFAGKIAGIDWGISWGENEQAGKLAAVTSQTGWL 333

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +  + + V ++  D            G  A+++   + +++  
Sbjct: 334 RQTQRFPVTIRFDDETAR--GFRRVGG-QADIIVYTEQSSIMN 373



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 73/206 (35%), Gaps = 8/206 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P  +KR+T   +   +GL  + I    +  + S+        V+ I    SG + +  
Sbjct: 37  SPPNKVKRLTTFVLALCLGLFVFYIAA--DRIIPSTDMARVRGFVIPITPLVSGRLAEVT 94

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY-DVLEKA 130
           VE    +  G  L+  +  +    I   +  + N    +  + +++     K  D L   
Sbjct: 95  VEPNEIVNPGDILVKIDSADYELAIQEAEQGLVNAGKSVGVQTASIASAQAKLTDALANQ 154

Query: 131 FESREEQ----LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
              R +      ++  G    + +      ++S    ++     +           N++S
Sbjct: 155 AHLRAQATRILTMEKKGIVSKSDADKTRASLASAKAQVEAAQAGIEQAKKQLGSTGNENS 214

Query: 187 LLR-ALLSSHQKDLTMMKNLFEKNAV 211
            ++ ALL   +  L + + +    A+
Sbjct: 215 EVKSALLKLQKAQLDLDRTVIRAPAI 240


>gi|332288223|ref|YP_004419075.1| macrolide transporter subunit MacA [Gallibacterium anatis UMN179]
 gi|330431119|gb|AEC16178.1| macrolide transporter subunit MacA [Gallibacterium anatis UMN179]
          Length = 388

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 60/143 (41%), Gaps = 3/143 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    I+ +V ++G +    N VE+ +  SG ++K  V+ G ++ +G  +   + I   +
Sbjct: 39  AKYSDIQQTVVATGTVR-SSNRVEVGARVSGKVEKILVKLGQKVKKGELIAELDSITQEN 97

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            ++  +  +   +  +   ++A    N+ +  +   ++ +   L D+    ++  S   N
Sbjct: 98  TLNSAQAQLTAYKAQLVAAQTAYRVANSNFQRIANLYKRKASSLDDYENAQNNLDSAKAN 157

Query: 155 YGISSVYRSLKMKLTRMRSIYLN 177
             +  +   +K     + +   N
Sbjct: 158 --VEQIQAQIKQSEIEVNTAATN 178



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 73/243 (30%), Gaps = 34/243 (13%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML----------RHINELYDEAN 252
           + + +   +++ D   QE  +  +  +L     +               + I  LY    
Sbjct: 79  QKVKKGELIAELDSITQENTLNSAQAQLTAYKAQLVAAQTAYRVANSNFQRIANLYKRKA 138

Query: 253 LEFANY------LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
               +Y      L     ++EQ Q        ++           I SPI GT++     
Sbjct: 139 SSLDDYENAQNNLDSAKANVEQIQAQIKQSEIEVNTAATNLNYTKITSPIDGTVISIPV- 197

Query: 307 SSSNYAQQSQPLMKI--VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           S       +Q    I  V       I+ +++   I  +K G           D      +
Sbjct: 198 SVGQTVNANQTTPTIIQVADLDTMLIKPEISEGDITKIKPGMKVQFTTLAEPDEIY---Q 254

Query: 365 AIIEKIDPIISQQDNNLQTQE-------YYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           A I  +DP ++   +N  ++        YY   + + +        +L+ G   +     
Sbjct: 255 AEIASVDPALTTLTDNEYSESVSDTNAIYYYANVLVPNPE-----HKLQIGMTTQNTIIT 309

Query: 418 KNT 420
              
Sbjct: 310 AQK 312


>gi|218671483|ref|ZP_03521153.1| hypothetical protein RetlG_07398 [Rhizobium etli GR56]
          Length = 394

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 45/384 (11%), Positives = 117/384 (30%), Gaps = 29/384 (7%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           ++++ ++ L T +    ++ +V++            + +P  G I +  ++ GS +  G 
Sbjct: 1   MTLVTVVSLPTITGFTSLDGTVNA--------RFAVVNAPIDGTIAEEPLKVGSPVKAGQ 52

Query: 83  PLLTFEDIET-TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES-REEQLLD 140
            L   ++      ++   +         +   K   D L+   + L    E  R+  + +
Sbjct: 53  SLAEIKNTRVNRAILASLEADRNTALDRVAALKKERDELSALREELSARLEVYRQTTIAN 112

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
              +      KV       +   + +     R    ++  L  K         +      
Sbjct: 113 LEREVEILRKKVEVSQAQDLVAQVDLD---RRMALNSKGILTQKLVEAARAAGAATGGEV 169

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + NL       +  LN   R       + + ++   +     +    ++ N   A    
Sbjct: 170 EISNLTVDQL--EQRLNAV-RQGIFVFGDGQNDVPYSRQREDEVVVRINDLNSRIA---- 222

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E      + Q+   +E +++  LE      T ++P  G +      + SN    ++ +  
Sbjct: 223 ENETRAGEVQKQLVEERNRVGNLESA----TAIAPFDGIVWSRSIVNGSNVVLNNELVRL 278

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF---PHYADIREKKFKAIIEKIDPIISQQ 377
           +    +  ++   V       +  G  A VR               +     ++      
Sbjct: 279 L--DCRELFVDILVPEVNYDEIYPGLVAQVRLFGRSDIFQGTVVSVRGSSASVETDSFAA 336

Query: 378 DNNLQTQEYYEVILKITDLAFSDN 401
                TQ    + + +     + +
Sbjct: 337 SLPPSTQRNARIRVHLDPSFMNGD 360


>gi|226310478|ref|YP_002770372.1| hypothetical protein BBR47_08910 [Brevibacillus brevis NBRC 100599]
 gi|226093426|dbj|BAH41868.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 425

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 95/258 (36%), Gaps = 8/258 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E  V +SG +  ED + +  +   G +++F V+ G ++ +G  +   +  +    I   
Sbjct: 45  LESKVLTSGLVTVEDKLKQYANVT-GTLREFVVKEGDKVKKGQVIAKIDTSDVDSRILEL 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  ++  + ++   +   +    +    ++   S+ ++  D   + +   +++F  G +S
Sbjct: 104 EAQMELAKANLAKAQIGNE---PEEVAQDRERVSQAQREYDAAKREYDRMNQLFTSG-AS 159

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             + L    ++M S        + + +L +      ++D+   +    K  V +  LN+ 
Sbjct: 160 TQQELDKLKSQMESSLSTLNVAKQQLALKQKG--PRKEDIAAQQAQINKLNVEKAQLNK- 216

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           ER+       +   +               E           +  D+ ++          
Sbjct: 217 ERVQSVVVAPMDGTVIGIAADNGQYVNKGTEILTLANLNNLLVEADINESDVNKLKIGQS 276

Query: 280 LTILEKTREQKTILSPIA 297
            TI   T  +K + + +A
Sbjct: 277 ATIEGVTLGKKKLNAEVA 294


>gi|187931799|ref|YP_001891784.1| membrane fusion protein [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|187712708|gb|ACD31005.1| membrane fusion protein [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 340

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 78/251 (31%), Gaps = 11/251 (4%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL- 230
           +   L      +K    +  L+  Q+ +    N+ + N             +    ++L 
Sbjct: 95  KDYQLKVAQANSKIIQTKGQLAIAQEQV----NVAKSNLTKAQSSLDTATSMADRYIKLY 150

Query: 231 RENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +++    ++  ++IN+       +   Y  LK+    +E  +                  
Sbjct: 151 KDDAGSLQDAQKYINQKIQAQKAKDEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLG 210

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             T+++P  G +   + +         Q L   +  +K  +I A      +  +K G   
Sbjct: 211 YTTLIAPDDGYVSNLKLY-KGQLVSPGQALFGFI-DNKKWWIDANFKETDLDRIKPGQKV 268

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI--ELR 406
            +    Y+     K  +I      + S       T  + +V  +        N++   LR
Sbjct: 269 EIELDMYSHSYAGKVDSISYATGSVFSLLPPENATGNWVKVTQRFPVKIILKNDLKYPLR 328

Query: 407 NGFPAEVLFTA 417
            G  A V    
Sbjct: 329 VGASATVKVDT 339



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 56/185 (30%), Gaps = 10/185 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
              +++ I     G I+K  + N   + +   L+  +         +    I   K  + 
Sbjct: 57  VNADIISISPKVGGYIEKVYIHNNQFVHKDDKLVQIDPKDYQLKVAQANSKIIQTKGQLA 116

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +  ++  KS L    +  D    +   R  +L            K  N  I +  ++ 
Sbjct: 117 IAQEQVNVAKSNLTKAQSSLDT-ATSMADRYIKLYKDDAGSLQDAQKYINQKIQA-QKAK 174

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIV 223
               + ++   L     + +    +    +   +L     +  +   VS   L + + + 
Sbjct: 175 DEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLGYTTLIAPDDGYVSNLKLYKGQLVS 234

Query: 224 YKSTL 228
               L
Sbjct: 235 PGQAL 239


>gi|56707198|ref|YP_169094.1| secretion protein [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110669668|ref|YP_666225.1| secretion protein [Francisella tularensis subsp. tularensis FSC198]
 gi|254371414|ref|ZP_04987415.1| secretion protein [Francisella tularensis subsp. tularensis FSC033]
 gi|254874038|ref|ZP_05246748.1| secretion protein [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|56603690|emb|CAG44651.1| Secretion protein [Francisella tularensis subsp. tularensis SCHU
           S4]
 gi|110320001|emb|CAL08034.1| Secretion protein [Francisella tularensis subsp. tularensis FSC198]
 gi|151569653|gb|EDN35307.1| secretion protein [Francisella tularensis subsp. tularensis FSC033]
 gi|254840037|gb|EET18473.1| secretion protein [Francisella tularensis subsp. tularensis
           MA00-2987]
          Length = 357

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)

Query: 242 RHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +Y++A +E  NY +E+++   DL + +   A + S+L           + +P  G
Sbjct: 136 ASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL-----------VKAPSDG 184

Query: 299 TIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT-------- 349
            IV  +         + +  L  IVP SK   +   V    +  VK G            
Sbjct: 185 VIVD-RIHGLGGVIVKDTDVLATIVPDSKSRIVELWVNSMDVPLVKIGDKVMLQFEGWPA 243

Query: 350 VRFPHYADIREKKFKAIIEKIDP 372
           V+F  +  +    F+  +  I P
Sbjct: 244 VQFSGWPQVAIGTFEGEVIFISP 266



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLK---KVS 102
            +   +    I +P  G + K+ V  G  + +G P++     +    + L + K   ++ 
Sbjct: 51  TLSPSERQQNISAPIGGRLGKWYVFEGDSVKKGDPIVEVLDLDPEVVSRLEEEKSAIELG 110

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I +++  I   K+ ++   +KY V + A   R  +        ++      N  ++ V  
Sbjct: 111 INSVKLAIKNTKNNIE--RHKYLVDKGASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKV 168

Query: 163 SLKMKLTRM 171
            +  + +R+
Sbjct: 169 QIARQQSRL 177


>gi|213968814|ref|ZP_03396955.1| multidrug resistance protein [Pseudomonas syringae pv. tomato T1]
 gi|301385785|ref|ZP_07234203.1| multidrug resistance protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|302061134|ref|ZP_07252675.1| multidrug resistance protein [Pseudomonas syringae pv. tomato K40]
 gi|302134413|ref|ZP_07260403.1| multidrug resistance protein [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213926417|gb|EEB59971.1| multidrug resistance protein [Pseudomonas syringae pv. tomato T1]
          Length = 402

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 89/259 (34%), Gaps = 32/259 (12%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + S   +L   + ++R +Y N   ++ + +  R  + + Q + +  ++L    A+SQ +L
Sbjct: 104 LQSAEANLGKVVRQVRGLYSNVDGMKAQLAAQRTAVQTAQDNYSRRRSLAAGGAISQEEL 163

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           +     +  +    +  ++  +  L     L D+  +     +K  +  L Q     A  
Sbjct: 164 SHARDSLTSA----QSALNNIQQQLSTSVALVDDTVVSSHPDVKAAAAQLRQAFLANA-- 217

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                       + T+++P+ G +   +S       Q     M ++P     +I A    
Sbjct: 218 ------------RSTLVAPVTGYVAK-RSVQLGQRIQPGTATMAVIPLD-QLWIDANFKE 263

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----------EY 386
            Q+  ++ G    +    Y      K+   I+ +          L  Q          + 
Sbjct: 264 TQLGKMRIGQPVEISSDLYGSDV--KYSGTIDSLGAGTGSAFALLPAQNATGNWIKIVQR 321

Query: 387 YEVILKITDLAFSDNNIEL 405
             V + I     + + + +
Sbjct: 322 VPVRVHINPEELAQHPLRI 340



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 50/142 (35%), Gaps = 9/142 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVVEI    +G +     ++G  + +G  LL F+  +    +   + ++  +   + 
Sbjct: 60  VNGNVVEITPLVTGTVISIGADDGDLVQEGQVLLQFDPSDAAVSLQSAEANLGKVVRQVR 119

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              S +D +  +      A ++          + + +  +    G +     L      +
Sbjct: 120 GLYSNVDGMKAQLAAQRTAVQT---------AQDNYSRRRSLAAGGAISQEELSHARDSL 170

Query: 172 RSIYLNRLDLENKSSLLRALLS 193
            S      +++ + S   AL+ 
Sbjct: 171 TSAQSALNNIQQQLSTSVALVD 192


>gi|196230102|ref|ZP_03128965.1| efflux transporter, RND family, MFP subunit [Chthoniobacter flavus
           Ellin428]
 gi|196225699|gb|EDY20206.1| efflux transporter, RND family, MFP subunit [Chthoniobacter flavus
           Ellin428]
          Length = 368

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 68/216 (31%), Gaps = 28/216 (12%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR-------DL 266
           +++N +     K    L +   +Q+    H  E   E      +  +++         D 
Sbjct: 77  SEINFESGAAVKKGASLIQLDTQQEEAQLHAAEAKLEWTKVDMDRKRDLVAKKTISPSDW 136

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS- 325
           +  Q  +   ++ +   +    +K I++P  G  +  +  +   Y         IVP   
Sbjct: 137 DSAQSEYRQAVANVDTAKAVIARKHIVAPFDGY-LGIRQVNLGQYLNPG---ASIVPLQS 192

Query: 326 -KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
               Y+   +  + +  +  G    +R    A   E +F+  I  ID  +     N+  Q
Sbjct: 193 LDPIYVEFNLPQQDLGQLAVGKKLRLR----AADIEGEFEGEINAIDSRVDDATRNVMVQ 248

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                          + + +LR G    V       
Sbjct: 249 -----------GTARNPDHKLRPGMYVNVDVLLPEK 273



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 16/177 (9%), Positives = 55/177 (31%), Gaps = 12/177 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ +   E+G+ + +G  L+  +  +    +   +  ++  +  +D ++  +       
Sbjct: 74  GIVSEINFESGAAVKKGASLIQLDTQQEEAQLHAAEAKLEWTKVDMDRKRDLVAKKTISP 133

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              + A     + + +          K             ++ L +  +   + + L++ 
Sbjct: 134 SDWDSAQSEYRQAVANVDTAKAVIARKHIVAPFDGYLGIRQVNLGQYLNPGASIVPLQS- 192

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                  L     +  + +    + AV +    +          E    I+   + +
Sbjct: 193 -------LDPIYVEFNLPQQDLGQLAVGK----KLRLRAADIEGEFEGEINAIDSRV 238


>gi|160889503|ref|ZP_02070506.1| hypothetical protein BACUNI_01927 [Bacteroides uniformis ATCC 8492]
 gi|156861020|gb|EDO54451.1| hypothetical protein BACUNI_01927 [Bacteroides uniformis ATCC 8492]
          Length = 296

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 83/247 (33%), Gaps = 33/247 (13%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         ++S+   R D+  + +  +  +   +++   + NL    A +Q  L+ 
Sbjct: 68  QLYLKKLQLEASVKSVEGQRPDILKQVAATQEQIVQARRERDRVSNLLRVGAANQKQLDD 127

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E ++     +L       +N  R +        ++ A                      
Sbjct: 128 AESLLEVLRKQLDAQNSTLRNSDRSLTWQSSSVGIQVAQ--------------------- 166

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E    +  I SP+ GT++  Q   +   A    PL K V   +  Y+RA +T +Q
Sbjct: 167 ----IEDQLRKCHITSPLTGTVLA-QYAEAGELAAPGTPLFK-VADMEQIYLRAYITSEQ 220

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  +K G    V +  Y     K++  I+  I              + +    Y V + +
Sbjct: 221 LAEIKLGQQVKV-YADYGKEVRKEYPGIVTWISDTSEFTPKTILTKDERANLVYAVKIAV 279

Query: 394 TDLAFSD 400
            +     
Sbjct: 280 KNDGMLK 286


>gi|85859624|ref|YP_461826.1| periplasmic component of efflux system [Syntrophus aciditrophicus
           SB]
 gi|85722715|gb|ABC77658.1| periplasmic component of efflux system [Syntrophus aciditrophicus
           SB]
          Length = 394

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 61/205 (29%), Gaps = 19/205 (9%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMS 278
           E     S ++ +  +   +N +     L   + L+ A     ++   L   +       +
Sbjct: 111 EEKAGASLVDAKRTLA--RNGMLFTRNLIARSELDTAETSVSVATAQLSAARAQVEQTRA 168

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVT 335
            L   E       ILSP+ GT++             S     L  I        I   V 
Sbjct: 169 SLNYAETNLRYTKILSPVDGTVISRNVD-VGQTVAASFQTPTLFNIAQDLTRMQINTSVD 227

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              I  ++           Y D+  +   A +    PI  Q          Y+V+ ++  
Sbjct: 228 EADIGKIQVDQPVEFSVDAYPDMIFEGKIAEVRS-APITVQNVVT------YDVVARVD- 279

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNT 420
               + ++ L+ G  A V       
Sbjct: 280 ----NPDLRLKPGMTANVSIVVAEK 300



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 44/129 (34%), Gaps = 3/129 (2%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +V+++G +     V  + +  SG I+   V+  S + +G  L   +       +   K +
Sbjct: 45  TVTATGTVNAVTTV-LVGTQVSGTIRDLYVDYNSPVKKGQLLAQIDPATFEARVQEAKAN 103

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +  L    + EK+    ++ K  +           +         T   V    +S+   
Sbjct: 104 L--LLAKANEEKAGASLVDAKRTLARNGMLFTRNLIARSELDTAETSVSVATAQLSAARA 161

Query: 163 SLKMKLTRM 171
            ++     +
Sbjct: 162 QVEQTRASL 170


>gi|323697507|ref|ZP_08109419.1| efflux transporter, RND family, MFP subunit [Desulfovibrio sp.
           ND132]
 gi|323457439|gb|EGB13304.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           desulfuricans ND132]
          Length = 393

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 79/257 (30%), Gaps = 24/257 (9%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
                + + L+  L    K+  ++  +  ++   +N L   E  + K   E    +   +
Sbjct: 63  AQASGQVNSLKVELGDAVKEGDLIAEIDAQS--QENALRIAEADLEKIKAERAAKVATLQ 120

Query: 239 NMLRHI--NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL-------EKTREQ 289
                    +   ++        ++    L + +   A   +++                
Sbjct: 121 QAQSEYTRQQKMLKSKATSRQDYEDAQATLAETRADIASLDAQIVAAAIDVDTARVDLGY 180

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYT 347
             I +P+ G +V             +Q    IV  +      + ++V+   + HVK G  
Sbjct: 181 TKITAPMDGVVVAV-VTKEGQTVNAAQSTPTIVKLAQLDTMTVESEVSEADVVHVKPGQK 239

Query: 348 ATVRFPHYADIREK-KFKAIIEKIDPIISQQDNNLQTQE----YYEVILKITDLAFSDNN 402
                    D + +   ++I      I++  D    +      YY  +  +     ++ +
Sbjct: 240 VYFTILGEPDNKYEATLRSIEPAPSSILTDDDGTTTSSSDEAIYYNALFDV-----ANPD 294

Query: 403 IELRNGFPAEVLFTAKN 419
            +LR    AEV      
Sbjct: 295 HKLRISMTAEVTIVLDE 311



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 54/135 (40%), Gaps = 4/135 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ +V ++G +     V  + +  SG +   +VE G  + +G  +   +     + + + 
Sbjct: 43  VQETVLATGTLTAFKQV-SVGAQASGQVNSLKVELGDAVKEGDLIAEIDAQSQENALRIA 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR---EEQLLDFLGKYHSTCSKVFNYG 156
           +  ++ ++     + + L    ++Y   +K  +S+    +   D       T + + +  
Sbjct: 102 EADLEKIKAERAAKVATLQQAQSEYTRQQKMLKSKATSRQDYEDAQATLAETRADIASLD 161

Query: 157 ISSVYRSLKMKLTRM 171
              V  ++ +   R+
Sbjct: 162 AQIVAAAIDVDTARV 176


>gi|253991632|ref|YP_003042988.1| multidrug resistance secretion protein [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253783082|emb|CAQ86247.1| multidrug resistance secretion protein [Photorhabdus asymbiotica]
          Length = 390

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 88/271 (32%), Gaps = 32/271 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
            +       +L   + +     ++   L     L + +L   Q DLT  ++L    A+++
Sbjct: 95  EHAFERAKNTLANHVRQTHQTIIDNEKLLANIELKQTVLQQAQDDLTRREHLGITGAIAK 154

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  EL     +       I +                       Q   
Sbjct: 155 ENLIHARNSVRMAKSELNVARQQYYANKALIIDTPL------------------DQQPAI 196

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               S+L     T ++  I++P+ G +   +S    +  +   PLM IVP +   ++ A 
Sbjct: 197 KLAASQLRDAWLTLQRTQIVAPVTGYVSR-RSVQVGSQIKSGSPLMVIVPTN-QLWVEAN 254

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+  V+ G   T+    Y       ++  I  +D          P  +   N ++ 
Sbjct: 255 FKEVQLADVRIGQPVTLISDFYGSDVT--YQGRIVGLDMGTGSAFSLLPAQNATGNWIKV 312

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
            +   V + +      D+ + +     A V 
Sbjct: 313 VQRLPVRVVLDAQQLIDHPLRIGLSMHATVD 343



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 66/193 (34%), Gaps = 5/193 (2%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVS---SSGEILNEDNVVEIKSPFSGIIK 68
           N   S +++ L+    +      S +    + V    ++ +     N V++ +  +G + 
Sbjct: 11  NEKKSKRKLALILATLLFIFAGLSYVAYWFVVVRHYQTTDDAYVVGNQVQVMAQITGSVT 70

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
               +N   + QG  LL  + I+     +  K ++ N            + L    ++ +
Sbjct: 71  TIYADNTDFVQQGDILLRLDGIDAEHAFERAKNTLANHVRQTHQTIIDNEKLLANIELKQ 130

Query: 129 KAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
              +  ++ L   + LG   +   +   +  +SV  +        +  Y N+  + +   
Sbjct: 131 TVLQQAQDDLTRREHLGITGAIAKENLIHARNSVRMAKSELNVARQQYYANKALIIDTPL 190

Query: 187 LLRALLSSHQKDL 199
             +  +      L
Sbjct: 191 DQQPAIKLAASQL 203


>gi|309786239|ref|ZP_07680867.1| multidrug resistance protein A [Shigella dysenteriae 1617]
 gi|308925984|gb|EFP71463.1| multidrug resistance protein A [Shigella dysenteriae 1617]
          Length = 334

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 42  RQAFDKAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVLLGNANLIGR 101

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 102 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNSWL------ 155

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+ G +   ++         + PLM +VP +   ++ A 
Sbjct: 156 ------------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 201

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 202 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 259

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++         + +
Sbjct: 260 VQRLPVRIELDQKQLEQYPLRI 281



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 58/159 (36%), Gaps = 7/159 (4%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----R 107
             N ++I S  SG + K   +N   + +G  L+T +  +     D  K ++ +      +
Sbjct: 2   AGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFDKAKTALASSVRQTHQ 61

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             I++++   +    K  + +   +     LL           +     ++S    L + 
Sbjct: 62  LMINSKQLQANIEVQKIALAKAQSDYNRRVLLGNANLIGREELQHARDAVTSAQAQLDVA 121

Query: 168 LTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
           + +  +     L   LE++ ++ +A        L + + 
Sbjct: 122 IQQYNANQAMILGTKLEDQPAVQQAATEVRNSWLALERT 160


>gi|241662818|ref|YP_002981178.1| secretion protein HlyD family protein [Ralstonia pickettii 12D]
 gi|240864845|gb|ACS62506.1| secretion protein HlyD family protein [Ralstonia pickettii 12D]
          Length = 429

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 90/297 (30%), Gaps = 32/297 (10%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + QL+                 +     +L   + ++R++Y N        ++  
Sbjct: 87  AIRADDTQLVTSGQPVIELDRADARVALEQAEAALAQTVRQVRTLYSNTSAYTATLAMRE 146

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L+  + DL   K +    AVSQ +++  +  V  +   L     + +       +   
Sbjct: 147 SDLAKAKDDLARRKQIAGTGAVSQEEISHAQTAVQAAQSALEAAKEQLQGNRVLTEQTTL 206

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +        ++                          + ++ + + G +   +S    
Sbjct: 207 ERHPNVLQAAAKVRE------------------AYLAYARTSLPASVTGYVAK-RSVQVG 247

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  PLM IVP     ++ A     Q++H++ G    +    Y       +   +  
Sbjct: 248 QRVAPGTPLMAIVPLD-QLWVDANFKEVQVRHMRVGQPVELVADVYGSSVT--YHGKVVG 304

Query: 370 ID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                       P  +   N ++  +   V + +      D+ + +     A+V   
Sbjct: 305 FSAGTGSAFSLLPAQNATGNWIKVVQRLPVRVSLDPKELKDHPLRVGLSMEAKVDIH 361



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 66/183 (36%), Gaps = 12/183 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT----DLIDLKKVSIKNLR 107
            + NVV++    +G +   + ++   +  G P++  +  +              +++ +R
Sbjct: 70  VQGNVVQVTPQVAGTVIAIRADDTQLVTSGQPVIELDRADARVALEQAEAALAQTVRQVR 129

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFE--SREEQLL--DFLGKYHSTCSKVFNYGISSVYRS 163
                  +    L  +   L KA +  +R +Q+     + +   + ++       S   +
Sbjct: 130 TLYSNTSAYTATLAMRESDLAKAKDDLARRKQIAGTGAVSQEEISHAQTAVQAAQSALEA 189

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQE 220
            K +L   R +   +  LE   ++L+A     +  L   +          V++  +   +
Sbjct: 190 AKEQLQGNR-VLTEQTTLERHPNVLQAAAKVREAYLAYARTSLPASVTGYVAKRSVQVGQ 248

Query: 221 RIV 223
           R+ 
Sbjct: 249 RVA 251


>gi|224456259|ref|ZP_03664732.1| membrane-fusion protein [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282158306|gb|ADA77697.1| Secretion protein [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 356

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)

Query: 242 RHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +Y++A +E  NY +E+++   DL + +   A + S+L           + +P  G
Sbjct: 135 ASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL-----------VKAPSDG 183

Query: 299 TIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT-------- 349
            IV  +         + +  L  IVP SK   +   V    +  VK G            
Sbjct: 184 VIVD-RIHGLGGVIVKDTDVLATIVPDSKSRIVELWVNSMDVPLVKIGDKVMLQFEGWPA 242

Query: 350 VRFPHYADIREKKFKAIIEKIDP 372
           V+F  +  +    F+  +  I P
Sbjct: 243 VQFSGWPQVAIGTFEGEVIFISP 265



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLK---KVS 102
            +   +    I +P  G + K+ V  G  + +G P++     +    + L + K   ++ 
Sbjct: 50  TLSPSERQQNISAPIGGRLGKWYVFEGDSVKKGDPIVEVLDLDPEVVSRLEEEKSAIELG 109

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I +++  I   K+ ++   +KY V + A   R  +        ++      N  ++ V  
Sbjct: 110 INSVKLAIKNTKNNIE--RHKYLVDKGASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKV 167

Query: 163 SLKMKLTRM 171
            +  + +R+
Sbjct: 168 QIARQQSRL 176


>gi|190895602|ref|YP_001985894.1| hypothetical protein RHECIAT_PA0000287 [Rhizobium etli CIAT 652]
 gi|190699547|gb|ACE93631.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 410

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 46/370 (12%), Positives = 118/370 (31%), Gaps = 29/370 (7%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET-TDL 95
              ++ +V++            + +P  G I +  ++ GS +  G  L   ++      +
Sbjct: 31  FTSLDGTVNA--------RFAVVNAPIDGTIAEEPIKVGSPVNAGQSLAEIKNTRVNRAI 82

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES-REEQLLDFLGKYHSTCSKVFN 154
           +   +         +   K   D L+   + L    E  R+  + +   +      KV  
Sbjct: 83  LASLEADRNTALDRVAALKKERDELSALREELSARLEVYRQTTIANLEREVEILRKKVEV 142

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +   +             R+ LE+K  L + L+ + +          E + ++ +
Sbjct: 143 SQAQDLVAQVD---------LDRRMALESKGILTQKLVEAARAAGAATGGEVEISNLTVD 193

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L Q+   V +      +  ++     +  +E+    N +  + + E      + Q+   
Sbjct: 194 QLQQRLNAVRQGIFVFGDGQNDVPYSRQREDEVVVRIN-DLNSRIAENETRAGEVQKQLV 252

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
            E ++++ LE      T  +P  G +      + SN    ++ +  +    +  ++   V
Sbjct: 253 QESNRVSSLESA----TATAPFDGVVWSRSIVNGSNVVLNNELIRLL--DCRELFVDILV 306

Query: 335 TPKQIQHVKKGYTATVRF---PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
                  +  G  A VR               +     ++           TQ    + +
Sbjct: 307 PEVNYDEIYPGLVAQVRLFGRSDLFKGTVISVRGSSALVETDSFAASLPPSTQRNARIRV 366

Query: 392 KITDLAFSDN 401
           ++     +D+
Sbjct: 367 RLDPSFMNDD 376


>gi|170744626|ref|YP_001773281.1| secretion protein HlyD family protein [Methylobacterium sp. 4-46]
 gi|168198900|gb|ACA20847.1| secretion protein HlyD family protein [Methylobacterium sp. 4-46]
          Length = 378

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 44/369 (11%), Positives = 99/369 (26%), Gaps = 75/369 (20%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           + V +    +G ++   V +   +  G  L   +D         ++  +   +   + EK
Sbjct: 66  DKVTVAPRVAGYVEGVSVGDNQAVRAGDVLARLDD---------REFRVALKQAEAEVEK 116

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
                                                    G + +       L +   +
Sbjct: 117 -----------------------------------------GRAQLVGVSAAILQQQAQV 135

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              R DL N      A L+  Q++    ++L +                   T++ ++  
Sbjct: 136 ASARADLVNA----EAALTFSQQEYARTQDLVKSG---------------SGTVQRQQQA 176

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                  R   +    A       ++         + +     +K+     T    TI +
Sbjct: 177 DADLRQRRAARDKAAAALDAAQRQVESFRALETSARASLEGGEAKVEQARLTLSYATITA 236

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           PI G +V +++     +      L+ IVP  +  Y+ A     Q+  + +G   +     
Sbjct: 237 PIDG-VVGDRALRVGQFVPAGTGLLTIVPMGRDIYLVANFKETQVGAMAEGQRVSFTVDA 295

Query: 355 YA-----DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           Y                  +   +  +      T+    V +++           LR G 
Sbjct: 296 YGGHAFEGRIASFAPGTGSQFALLPPENATGNFTKVVQRVPVRVALDGDDPLLARLRPGL 355

Query: 410 PAEVLFTAK 418
             E     +
Sbjct: 356 SVEATVHTE 364


>gi|124516744|gb|EAY58252.1| Secretion protein HlyD [Leptospirillum rubarum]
          Length = 380

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 71/206 (34%), Gaps = 17/206 (8%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              Q      +  ++R  I   +  L+   +L  +  +  + + ++    L  +     +
Sbjct: 100 YRAQVLEARSNLKKIRTQIVLDRLALKRDRDLLKKHIIAQSVFDQD-QGKLSMDMANEDE 158

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRA 332
            ++ L +        TI +PI G ++  Q          +     L  I        +  
Sbjct: 159 MVAGLALANANLRYTTIRAPIDGIVISRQV-QVGQTVTAAFRTPKLFTIAQDLSEMRLDT 217

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +V+   I  V++G   T + P Y D      + I+ ++ P              Y+V+ +
Sbjct: 218 RVSESDIGDVREGQKVTFQVPAYPDRTFSG-QVIMVRVHPKTVSHVVT------YDVVSR 270

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAK 418
           ++     + ++ L+ G  A V     
Sbjct: 271 VS-----NPDLTLKPGMTALVTLHVG 291



 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 80/208 (38%), Gaps = 23/208 (11%)

Query: 18  KRMTLLSIIGIIGLITWS-------------------ILLPIEISVSSSGEILNEDNVVE 58
           KR  +  ++ ++GL  W                    +   +E  V+++G I      V 
Sbjct: 8   KRWAVAGVLLVMGLAFWGLRHHRKTEDLDRDFVTRPVVRGDLEQKVTATGRIK-AMKTVH 66

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SGII + + E  S++ +G  L   +       +   + ++K +R  I  ++ AL 
Sbjct: 67  VGAQVSGIITEVRAEFNSRVHRGDVLAQIDPAIYRAQVLEARSNLKKIRTQIVLDRLALK 126

Query: 119 FLNN---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
              +   K+ + +  F+  + +L   +       + +     +  Y +++  +  +    
Sbjct: 127 RDRDLLKKHIIAQSVFDQDQGKLSMDMANEDEMVAGLALANANLRYTTIRAPIDGIVISR 186

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMK 203
             ++     ++     L +  +DL+ M+
Sbjct: 187 QVQVGQTVTAAFRTPKLFTIAQDLSEMR 214


>gi|332882490|ref|ZP_08450108.1| efflux transporter, RND family, MFP subunit [Capnocytophaga sp.
           oral taxon 329 str. F0087]
 gi|332679550|gb|EGJ52529.1| efflux transporter, RND family, MFP subunit [Capnocytophaga sp.
           oral taxon 329 str. F0087]
          Length = 414

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/264 (12%), Positives = 71/264 (26%), Gaps = 52/264 (19%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
            + +  +  +   +        A     +++    K LF+K  +S+ + ++       + 
Sbjct: 99  QSGLNRVLASLETVRASQQQSEASYKEAEENYKRNKLLFDKGVISKAEWDKIVSAYEMAK 158

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                  +  ++ +  ++E                                     +   
Sbjct: 159 AARESARYNVQSAMASVSE------------------------------------AQDNL 182

Query: 288 EQKTILSPIAGTIVYNQS----FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           ++  I SP  GTI                     +M+ V +     +   V    I  V 
Sbjct: 183 KKTQIYSPSDGTISKLSVELGERVVGTIQMTGTEIMR-VANLGSMEVEVDVNENDIVKVN 241

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--- 400
            G    V    Y       FK  +  I    +   +  Q   + +V + I + +++D   
Sbjct: 242 NGAEVNVEVDAYPKRT---FKGTVTNIANTANATASADQVTNF-KVKIHIEESSYTDLVK 297

Query: 401 ----NNIELRNGFPAEVLFTAKNT 420
                    R G  A V    +  
Sbjct: 298 DKKEGYSPFRPGMTATVDILTQTK 321



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 50/144 (34%), Gaps = 6/144 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +   VS++G+I  E  +  + S  SG I +  ++ G  + +G  L+          ++
Sbjct: 45  ATLTQKVSATGKIQPELEIK-LSSEVSGEIIELPIKEGQTVKKGDLLVRINPDIYQSGLN 103

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE-----SREEQLLDFLGKYHSTCSKV 152
               S++ +R      +++       Y   +  F+       E   +    +      + 
Sbjct: 104 RVLASLETVRASQQQSEASYKEAEENYKRNKLLFDKGVISKAEWDKIVSAYEMAKAARES 163

Query: 153 FNYGISSVYRSLKMKLTRMRSIYL 176
             Y + S   S+      ++   +
Sbjct: 164 ARYNVQSAMASVSEAQDNLKKTQI 187


>gi|227536854|ref|ZP_03966903.1| membrane fusion efflux protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243281|gb|EEI93296.1| membrane fusion efflux protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 455

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 23/314 (7%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL--EN 183
           V++ A +  +E+ +  L          F   +SS      ++L       + +  +    
Sbjct: 37  VIKVAVDKVQERTVHELVSASGKIQPEFEVKLSSEVSGEIIELNIKEGDVVRKGQVLCRV 96

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K  +L++        L + +        SQ  L QQE     +    + N    K  +  
Sbjct: 97  KPDILQSGFDQAVASLNIQRATLAS---SQQQLKQQEANFVNTEATFKRNQELFKKRVIS 153

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRT---FADEMSKLTILEKTREQKTILSPIAGTI 300
             E+ D+A  ++ + L  I    +  + T        + +        + TI +P  G I
Sbjct: 154 AAEM-DKAEADYRSALASIEAQRQSVRATRYGIDQSQASVKQAGDNLARTTIYAPSDGVI 212

Query: 301 VYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
                                +M+I  +     +   V    I  VK G  A +    + 
Sbjct: 213 SLLSVELGERVVGTAQMAGTEIMRIA-NMSSMEVNVDVNENDINRVKLGDQADIEVDAFQ 271

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEY--YEVILKITDLAFSD-------NNIELRN 407
             +       I       +        ++   + V ++I+  +++D       N    R 
Sbjct: 272 GRKFVGVVTEIASSSKSAATTTAASTAEQVTNFNVKVRISPESYADILNNNLKNPSPFRP 331

Query: 408 GFPAEVLFTAKNTT 421
           G  A V    K ++
Sbjct: 332 GLSATVQIRTKTSS 345



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 55/151 (36%), Gaps = 6/151 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   VS+SG+I  E  V  + S  SG I +  ++ G  + +G  L   +        D  
Sbjct: 50  VHELVSASGKIQPEFEVK-LSSEVSGEIIELNIKEGDVVRKGQVLCRVKPDILQSGFDQA 108

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             S+   R  + + +  L      +   E  F+  +E     L K     +   +   + 
Sbjct: 109 VASLNIQRATLASSQQQLKQQEANFVNTEATFKRNQE-----LFKKRVISAAEMDKAEAD 163

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              +L     + +S+   R  ++   + ++ 
Sbjct: 164 YRSALASIEAQRQSVRATRYGIDQSQASVKQ 194


>gi|83858416|ref|ZP_00951938.1| Secretion protein HlyD [Oceanicaulis alexandrii HTCC2633]
 gi|83853239|gb|EAP91091.1| Secretion protein HlyD [Oceanicaulis alexandrii HTCC2633]
          Length = 505

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 69/200 (34%), Gaps = 14/200 (7%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V + + +  + + ++        +  + A       L     +L   + +     + L 
Sbjct: 146 EVSQRSFDRAQELVQRGTYSAAQYDSAESALAAANAALLVAQANLRNARASELQRRASLE 205

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-SQPLMKIVPHS-KLTYIRAKVTPKQI 339
             +   E+  I SPI G ++  Q       A   + P++ ++        I A++    I
Sbjct: 206 SAQVDLERTYIRSPIEGVVIDRQIDEGQTVAASFNAPVLFLIAQDLSRIQIEAEIDEADI 265

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             + +G T T     Y D    +F   + ++  + +  + N+ T   Y V+++       
Sbjct: 266 GQIDEGQTVTFDVDAYPDR---EFAGEVTQV-RLAATNEANVVT---YTVVIQAD----- 313

Query: 400 DNNIELRNGFPAEVLFTAKN 419
           +    L  G  A V      
Sbjct: 314 NPGQRLLPGMTANVSIVTGQ 333



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 81/242 (33%), Gaps = 4/242 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   VSSSG I     V E+ S  SG + +   +   Q+  G  L   +       ++  
Sbjct: 62  ISRIVSSSGAIAPLITV-EVGSQLSGQVLELHADFNDQVSSGDLLARIDPQTFETRVEEA 120

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGI 157
           + S++     +   ++ L+      +V +++F+  +E +    +    + +         
Sbjct: 121 QASLEVASAQVAVAQANLERARVDLEVSQRSFDRAQELVQRGTYSAAQYDSAESALAAAN 180

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +++  +         S    R  LE+    L         +  ++    ++        N
Sbjct: 181 AALLVAQANLRNARASELQRRASLESAQVDLERTYIRSPIEGVVIDRQIDEGQTVAASFN 240

Query: 218 QQERIVYKSTLELRENIHEQ-KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
                +    L   +   E  +  +  I+E         A   +E + ++ Q +    +E
Sbjct: 241 APVLFLIAQDLSRIQIEAEIDEADIGQIDEGQTVTFDVDAYPDREFAGEVTQVRLAATNE 300

Query: 277 MS 278
            +
Sbjct: 301 AN 302


>gi|51595206|ref|YP_069397.1| multidrug efflux pump membrane fusion subunit EmrA [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808749|ref|YP_652665.1| multidrug resistance protein A [Yersinia pestis Antiqua]
 gi|108810994|ref|YP_646761.1| multidrug resistance protein A [Yersinia pestis Nepal516]
 gi|145600162|ref|YP_001164238.1| multidrug resistance protein A [Yersinia pestis Pestoides F]
 gi|149364892|ref|ZP_01886927.1| multidrug resistance protein A [Yersinia pestis CA88-4125]
 gi|153947673|ref|YP_001402161.1| multidrug resistance protein A [Yersinia pseudotuberculosis IP
           31758]
 gi|162420694|ref|YP_001607795.1| multidrug resistance protein A [Yersinia pestis Angola]
 gi|165926542|ref|ZP_02222374.1| multidrug resistance protein A [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165935908|ref|ZP_02224478.1| multidrug resistance protein A [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166010987|ref|ZP_02231885.1| multidrug resistance protein A [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166213085|ref|ZP_02239120.1| multidrug resistance protein A [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398719|ref|ZP_02304243.1| multidrug resistance protein A [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421650|ref|ZP_02313403.1| multidrug resistance protein A [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167423397|ref|ZP_02315150.1| multidrug resistance protein A [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167468808|ref|ZP_02333512.1| multidrug resistance protein A [Yersinia pestis FV-1]
 gi|186894224|ref|YP_001871336.1| efflux pump membrane protein [Yersinia pseudotuberculosis PB1/+]
 gi|218930292|ref|YP_002348167.1| multidrug resistance protein A [Yersinia pestis CO92]
 gi|229838879|ref|ZP_04459038.1| multidrug resistance protein A [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229896372|ref|ZP_04511541.1| multidrug resistance protein A [Yersinia pestis Pestoides A]
 gi|229899448|ref|ZP_04514591.1| multidrug resistance protein A [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229901212|ref|ZP_04516334.1| multidrug resistance protein A [Yersinia pestis Nepal516]
 gi|294504981|ref|YP_003569043.1| multidrug resistance protein A [Yersinia pestis Z176003]
 gi|51588488|emb|CAH20096.1| multidrug efflux pump, membrane fusion (MFP/HlyD) family subunit
           emrA [Yersinia pseudotuberculosis IP 32953]
 gi|108774642|gb|ABG17161.1| multidrug resistance protein A [Yersinia pestis Nepal516]
 gi|108780662|gb|ABG14720.1| multidrug resistance protein A [Yersinia pestis Antiqua]
 gi|115348903|emb|CAL21860.1| multidrug resistance protein A [Yersinia pestis CO92]
 gi|145211858|gb|ABP41265.1| multidrug resistance protein A [Yersinia pestis Pestoides F]
 gi|149291305|gb|EDM41379.1| multidrug resistance protein A [Yersinia pestis CA88-4125]
 gi|152959168|gb|ABS46629.1| multidrug resistance protein A [Yersinia pseudotuberculosis IP
           31758]
 gi|162353509|gb|ABX87457.1| multidrug resistance protein A [Yersinia pestis Angola]
 gi|165916053|gb|EDR34660.1| multidrug resistance protein A [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165921470|gb|EDR38667.1| multidrug resistance protein A [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165989987|gb|EDR42288.1| multidrug resistance protein A [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166205872|gb|EDR50352.1| multidrug resistance protein A [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960569|gb|EDR56590.1| multidrug resistance protein A [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167051223|gb|EDR62631.1| multidrug resistance protein A [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057567|gb|EDR67313.1| multidrug resistance protein A [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|186697250|gb|ACC87879.1| efflux pump membrane protein [Yersinia pseudotuberculosis PB1/+]
 gi|229681141|gb|EEO77235.1| multidrug resistance protein A [Yersinia pestis Nepal516]
 gi|229687850|gb|EEO79923.1| multidrug resistance protein A [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229695245|gb|EEO85292.1| multidrug resistance protein A [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229700648|gb|EEO88678.1| multidrug resistance protein A [Yersinia pestis Pestoides A]
 gi|262366969|gb|ACY63526.1| multidrug resistance protein A [Yersinia pestis D182038]
 gi|294355440|gb|ADE65781.1| multidrug resistance protein A [Yersinia pestis Z176003]
 gi|320016457|gb|ADW00029.1| multidrug resistance protein A [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 390

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 86/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +   +L +  LS  Q DL     L     + +
Sbjct: 98  EQAFEQAKTALANSVRQTHQLIINSKQYQANIALKKTELSQAQNDLKRRVVLGAAAVIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +   L                  D A  ++      +     + Q   
Sbjct: 158 EELQHARDAVEAAQASL------------------DMAVQQYNANQALVLNTPLEKQPAI 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+     T ++  ++SPI+G +   +S           PLM +VP     +I A 
Sbjct: 200 EQAAAKMRDAWLTLQRTKVVSPISGYVSR-RSVQVGAEISSGTPLMAVVPAD-QLWIDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G  AT+    Y D     ++  +  +D          P  +   N ++ 
Sbjct: 258 FKETQLANMRIGQPATIVTDFYGDDV--VYQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V + + +    ++ + +
Sbjct: 316 VQRLPVRIALDEKQLKEHPLRI 337



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 59/174 (33%), Gaps = 10/174 (5%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH--- 109
             N V+I S   G +     EN   +  G  L+T +  +     +  K ++ N       
Sbjct: 58  SGNQVQIMSQVPGSVVSVHFENTDFVKSGDVLVTLDPTDAEQAFEQAKTALANSVRQTHQ 117

Query: 110 --IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             I++++   +    K ++ +   + +   +L           +     + +   SL M 
Sbjct: 118 LIINSKQYQANIALKKTELSQAQNDLKRRVVLGAAAVIGREELQHARDAVEAAQASLDMA 177

Query: 168 LTR--MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF---EKNAVSQNDL 216
           + +       +    LE + ++ +A        LT+ +          VS+  +
Sbjct: 178 VQQYNANQALVLNTPLEKQPAIEQAAAKMRDAWLTLQRTKVVSPISGYVSRRSV 231


>gi|332308297|ref|YP_004436148.1| membrane fusion protein [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175626|gb|AEE24880.1| membrane fusion protein [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 342

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 65/166 (39%), Gaps = 7/166 (4%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKF 70
           P + K +  L I  +IG +      P   +   +G +        +  I +  +G I+ +
Sbjct: 21  PRTHKTIIWLVITLVIGAVLLLTFTPWVQTAYGTGSVNSPDPLSRIQPISALLNGQIETW 80

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR----CHIDTEKSALDFLNNKYDV 126
            V  G Q+ +G P++T  D+++  L  L+   +   +      +  + +  +    K  +
Sbjct: 81  HVREGDQVKKGEPIVTLVDVDSDRLEKLRSQQVAANQRYVSNKLSVQNALSNLSRQKKLL 140

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            E     +E + ++   +     +      + ++  SL  + TR +
Sbjct: 141 QEGLVSQKEVESVEIALEKLKAEAAKTEEDLDTLKMSLARQETRTK 186



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 63/179 (35%), Gaps = 13/179 (7%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQ 268
           V  + L +       +      N    +N L +++      +  L     ++ +   LE+
Sbjct: 100 VDSDRLEKLRSQQVAANQRYVSNKLSVQNALSNLSRQKKLLQEGLVSQKEVESVEIALEK 159

Query: 269 NQRTFADEMSKLTILEKTREQKTIL---SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
            +   A     L  L+ +  ++      +P+ GT+V  QS  S+ Y      L   VP +
Sbjct: 160 LKAEAAKTEEDLDTLKMSLARQETRTKFAPVDGTVVRLQSGGSATYVTAGSILGWFVPAN 219

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATV--------RFPHYADIREKKFKAIIEKIDPIISQ 376
               I  K+         KG    +        +F  +  +    F+ ++  ++P+  Q
Sbjct: 220 VERQISIKINGLDAALATKGKKVRIQFEGWPTFQFSGWPGMSVGTFEGVVSFVEPVADQ 278


>gi|237755981|ref|ZP_04584567.1| efflux transporter, RND family, MFP subunit [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691864|gb|EEP60886.1| efflux transporter, RND family, MFP subunit [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 391

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 99/313 (31%), Gaps = 50/313 (15%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  +++ +  L     + D L  +  S     +   G        VF    S +  ++  
Sbjct: 50  QGELESYQKFLGEFRPENDALVSSKFSATVLYVANEGTKVKKGDLVFKLDSSDIESNISA 109

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                ++I       + +         + +K+    K L+EK  +S+  L   E +    
Sbjct: 110 LTYSQKAILDQIDSAKAQVEASNTQYINAKKEYERYKGLYEKELISKEQLENMENLY--- 166

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
               ++ +  ++N L  + +L D+A                           ++  L+  
Sbjct: 167 ----KQALANKENALSKVKQLEDQAK----------------------SVAGQIESLKSN 200

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                  +P  G +V ++  +  + A   +PL++IV  S    +   V  +    VKKG 
Sbjct: 201 LNYTEYRAPFDG-VVASKFVNVGDVALAGKPLVEIV-GSGKYLVYVNVPTELALKVKKG- 257

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              V    Y              +D ++     + Q        L I  L+ S+N   L 
Sbjct: 258 --DVEKVSYNGR----------SVDAVVEDVLQSAQNN------LSIIKLSVSNNPFNLP 299

Query: 407 NGFPAEVLFTAKN 419
                +V      
Sbjct: 300 AHTFVDVFIKEGK 312



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 49/123 (39%), Gaps = 2/123 (1%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G+++ +G  +   +  +    I     S K +   ID+ K+ ++  N +Y   +K +E 
Sbjct: 85  EGTKVKKGDLVFKLDSSDIESNISALTYSQKAILDQIDSAKAQVEASNTQYINAKKEYE- 143

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R + L +           + N    ++       L++++ +      +  +   L++ L+
Sbjct: 144 RYKGLYEKELISKEQLENMENLYKQALANKENA-LSKVKQLEDQAKSVAGQIESLKSNLN 202

Query: 194 SHQ 196
             +
Sbjct: 203 YTE 205


>gi|300773303|ref|ZP_07083172.1| membrane fusion efflux protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300759474|gb|EFK56301.1| membrane fusion efflux protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 455

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 23/314 (7%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL--EN 183
           V++ A +  +E+ +  L          F   +SS      ++L       + +  +    
Sbjct: 37  VIKVAVDKVQERTVHELVSASGKIQPEFEVKLSSEVSGEIIELNIKEGDVVRKGQVLCRV 96

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K  +L++        L + +        SQ  L QQE     +    + N    K  +  
Sbjct: 97  KPDILQSGFDQAVASLNIQRATLAS---SQQQLKQQEANFVNTEATFKRNQELFKKRVIS 153

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRT---FADEMSKLTILEKTREQKTILSPIAGTI 300
             E+ D+A  ++ + L  I    +  + T        + +        + TI +P  G I
Sbjct: 154 AAEM-DKAEADYRSALASIEAQRQSVRATRYGIDQSQASVKQAGDNLARTTIYAPSDGVI 212

Query: 301 VYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
                                +M+I  +     +   V    I  VK G  A +    + 
Sbjct: 213 SLLSVELGERVVGTAQMAGTEIMRIA-NMSSMEVNVDVNENDINRVKLGDQADIEVDAFQ 271

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEY--YEVILKITDLAFSD-------NNIELRN 407
             +       I       +        ++   + V ++I+  +++D       N    R 
Sbjct: 272 GRKFVGVVTEIASSSKSAATTTAASTAEQVTNFNVKVRISPESYADILNNNLKNPSPFRP 331

Query: 408 GFPAEVLFTAKNTT 421
           G  A V    K ++
Sbjct: 332 GLSATVQIRTKTSS 345



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 55/151 (36%), Gaps = 6/151 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   VS+SG+I  E  V  + S  SG I +  ++ G  + +G  L   +        D  
Sbjct: 50  VHELVSASGKIQPEFEVK-LSSEVSGEIIELNIKEGDVVRKGQVLCRVKPDILQSGFDQA 108

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             S+   R  + + +  L      +   E  F+  +E     L K     +   +   + 
Sbjct: 109 VASLNIQRATLASSQQQLKQQEANFVNTEATFKRNQE-----LFKKRVISAAEMDKAEAD 163

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              +L     + +S+   R  ++   + ++ 
Sbjct: 164 YRSALASIEAQRQSVRATRYGIDQSQASVKQ 194


>gi|261341379|ref|ZP_05969237.1| HtpX protein [Enterobacter cancerogenus ATCC 35316]
 gi|288316690|gb|EFC55628.1| HtpX protein [Enterobacter cancerogenus ATCC 35316]
          Length = 331

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/363 (11%), Positives = 102/363 (28%), Gaps = 90/363 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G  I  G  L   +     +               +   K+ +     +
Sbjct: 51  GGRLASLNVDEGDAIKTGQTLGMLDKAPFEN--------------ALMQAKAGVSVAQAQ 96

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           YD+++  +   E                                                
Sbjct: 97  YDLMQAGYRDEE------------------------------------------IAQATA 114

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +A     +      + L++   +S NDL                     ++    
Sbjct: 115 AVRQAQAAYDYAKNFYNRQQGLWKSRTISANDL------------------ENARSSRDQ 156

Query: 244 INELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                  A  + + Y      +D+ Q + +     ++L   E      T+++P  GT++ 
Sbjct: 157 AQATLKSAQDKLSQYRTGNRPQDIAQAKASLEQAQAQLAQAELDLRDTTLVAPSDGTLMT 216

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++    +       ++ +   ++  ++RA +    +  ++ G        +     +K 
Sbjct: 217 -RAVEPGSMLSAGSTVLTLS-LTRPVWVRAYIDEPNLGQMQPGRE---LLLYTDGRPDKP 271

Query: 363 FKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +   +  + P       + +  +L+T   Y + + +TD   +     LR G P  V  T 
Sbjct: 272 YHGKVGFVSPTAEFTPKTVETPDLRTDLVYRLRIIVTDADDA-----LRQGMPVTVKLTD 326

Query: 418 KNT 420
              
Sbjct: 327 GER 329


>gi|162146068|ref|YP_001600526.1| HlyD family secretion protein [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209544445|ref|YP_002276674.1| secretion protein HlyD family protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161784642|emb|CAP54179.1| putative secretion protein, HlyD-family [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532122|gb|ACI52059.1| secretion protein HlyD family protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 358

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 102/314 (32%), Gaps = 20/314 (6%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            ++   +  +      R ++++    +      ++ +        +L +    +++   +
Sbjct: 40  AYVTADFPTVAPKVAGRIDRVIAQDNQVVHAGEELAHIEDDDYRAALAVATGTVQAAQGD 99

Query: 178 RLDLENKSSLLRALLSSHQKD-LTMMKNL--FEKNAVSQNDLNQQERIVYKSTLELRENI 234
             +LE + +   A+++  +   L     L    +NAV   +L+       +         
Sbjct: 100 VANLEAELARQDAVIAQARAAVLADQATLLFARQNAVRYRNLSSGGAGTIEQQQSSDARE 159

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E +  +       D A  + A    +I R      R   DE       +      TI +
Sbjct: 160 KEAEAAIARDQAGVDAAIRQVAVLKGQIERARGALLRAQGDERQ----AQLNLSYCTIPA 215

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P+ G +V  +     NY      ++ +VP      + A     Q+  V+ G  AT+    
Sbjct: 216 PMDG-VVGERGVRVGNYVHPGTGILAVVPTHDAYVL-ANFQETQLTRVQTGQRATIWVDT 273

Query: 355 YADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRN--- 407
           +     +  KA ++ + P      +    +  T  + +V+ +I      D    L     
Sbjct: 274 FP---GQPLKAHVDSLAPATGVAFAPIQPDNATGNFTKVVQRIPVKLTFDPGQPLAAKVR 330

Query: 408 -GFPAEVLFTAKNT 420
            G   E      + 
Sbjct: 331 VGMSVEANIDTSSK 344



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 61/169 (36%), Gaps = 18/169 (10%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLN 121
           G I +   ++   +  G  L   ED +    + +   +++  +    +++ E +  D + 
Sbjct: 55  GRIDRVIAQDNQVVHAGEELAHIEDDDYRAALAVATGTVQAAQGDVANLEAELARQDAVI 114

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +         +R   L D      +  + V      ++       + + +S      + 
Sbjct: 115 AQ---------ARAAVLADQATLLFARQNAV---RYRNLSSGGAGTIEQQQSSDAREKEA 162

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           E   +  +A + +  + + ++K   E+   ++  L + +    ++ L L
Sbjct: 163 EAAIARDQAGVDAAIRQVAVLKGQIER---ARGALLRAQGDERQAQLNL 208


>gi|270294026|ref|ZP_06200228.1| HlyD family secretion protein [Bacteroides sp. D20]
 gi|270275493|gb|EFA21353.1| HlyD family secretion protein [Bacteroides sp. D20]
          Length = 409

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 74/221 (33%), Gaps = 18/221 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQ--KNMLRHINELYDEANLEFANYLKEISRDL 266
             +++ D    +  +            E   +  L   N+  +E  L  A   ++   + 
Sbjct: 86  QLIAEMDRVTLQSELASQRAAYNGAKAEYEYQKKLYERNKTLNEKQLIAATDYEQSVYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ +  +    + L   E+     TI SPI G ++  +   +            L  I  
Sbjct: 146 EKAKSNYESSQASLAKAERNLSYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI----DPIISQQDN 379
                 + A V    I  V++G  AT     Y +     F+ ++ +I        S    
Sbjct: 205 DLTQMQVVADVDEADIGGVEEGQRATFTVDAYPND---VFEGVVTQIRLGDASSSSTSST 261

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +  T   YEV++     +  + +++L+    A V     + 
Sbjct: 262 STSTVVTYEVVI-----SAHNPDLKLKPRLTANVTIFTLDR 297



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 23/176 (13%)

Query: 18  KRMTLLSIIGII--GLITW---------------SIL--LPIEISVSSSGEILNEDNVVE 58
           KR+ L+++  +I  G   W               + +    I  SV+++G I     V E
Sbjct: 4   KRIILIAVAAVIIVGGGVWLFGGAKAKHKVTYATATIHKGEISESVTATGTIEPVTEV-E 62

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SGII K  V+  S + +G  +   + +     +  ++ +    +   + +K   +
Sbjct: 63  VGTQVSGIIDKIHVDYNSVVTKGQLIAEMDRVTLQSELASQRAAYNGAKAEYEYQKKLYE 122

Query: 119 F---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
               LN K  +    +E            Y S+ + +     +  Y ++   +  +
Sbjct: 123 RNKTLNEKQLIAATDYEQSVYNYEKAKSNYESSQASLAKAERNLSYATITSPIDGV 178


>gi|168232735|ref|ZP_02657793.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|194470924|ref|ZP_03076908.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|194457288|gb|EDX46127.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|205333177|gb|EDZ19941.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
          Length = 355

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 82/300 (27%), Gaps = 19/300 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F  + E L     +            I     ++      +          ++  
Sbjct: 63  VSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSEMRAAQSVV 122

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L S  K     ++L ++ AVS   L+        +   L     +       I 
Sbjct: 123 KQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESARAALETAKAQVSAAKAAIE 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                 Q +   A    +  + +   +   + +P  G + Y + 
Sbjct: 183 AARTSIIQ-------------AQTRVEAAQATERRIVAD--IDDSELKAPRDGRVQY-RV 226

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +Q+  +K G  A +      D+R     +
Sbjct: 227 AEPGEVLSAGGRVLNMVDLSD-VYMTFFLPTEQVGLLKIGGEARLVLDAAPDLRIPATIS 285

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            +  +     +  + ++ + +  + V  +I       +   ++ G P             
Sbjct: 286 FVASVAQFTPKTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLDERVPW 345


>gi|308187671|ref|YP_003931802.1| Multidrug resistance protein A [Pantoea vagans C9-1]
 gi|308058181|gb|ADO10353.1| Multidrug resistance protein A [Pantoea vagans C9-1]
          Length = 342

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 47/356 (13%), Positives = 105/356 (29%), Gaps = 82/356 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I   QV++  Q+  G  L T +D +    ++  +  ++  +  + + ++ L+     
Sbjct: 54  SGYISNVQVQDNQQVKAGQLLATLDDRDYRVALESAEADLQVSQAKLLSSQAQLE----- 108

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                     +++ ++D      +       Y   S  R  ++  +   +    +    N
Sbjct: 109 ----------QQQSVIDQQKASVAASQASAQYAGQSADRYNRLYKSGTVAADDQQKSSAN 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + S L A                                V++S   L   + +   +   
Sbjct: 159 QRSALAA--------------------------------VHQSQAALASAVKQVGVLQAA 186

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +     +     A+                      +           I +P+ G +   
Sbjct: 187 VRSAEADVAAAKAS----------------------VDQARLNLSYTRITAPVDGMV-GQ 223

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +S     Y      L+ +VP  +       +  +    V+ G    +R         K F
Sbjct: 224 RSVRIGAYVSAGTRLLAVVPLQQTYITANYLETQLSD-VRPGQRVQIRVDALP---GKTF 279

Query: 364 KAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNN----IELRNGFPA 411
              ++ I P      S    +  T  Y +V+ ++      D++     +LR G  A
Sbjct: 280 TGHVDSIAPATGATFSAIAPDNATGNYTKVVQRLPVKIVLDSDQQHLAQLRVGMSA 335


>gi|254514914|ref|ZP_05126975.1| efflux transporter, RND family, MFP subunit [gamma proteobacterium
           NOR5-3]
 gi|219677157|gb|EED33522.1| efflux transporter, RND family, MFP subunit [gamma proteobacterium
           NOR5-3]
          Length = 365

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 79/288 (27%), Gaps = 28/288 (9%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                +  + +     +     +       R++              R    +  + +  
Sbjct: 29  QPTLDTKTAALAEPEQTLPRVRVTQFNAEQRTLTRILRGKTASKRTARVSAETTGRVIA- 87

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + +   + VS+  +   E  V      + E                    L+  N L +
Sbjct: 88  -RPVERGDHVSEGAVL-CELAVNDRQAAVEEATAALSQAEIEYAGAL---ELKDRNLLSK 142

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           I   + Q         + LT  +   E+  I++P  G I         + A    P   +
Sbjct: 143 IR--IAQVASELEAARAALTRQQLNLERTRIVAPFDGVIEELHMD-VGDLASVGAPCATL 199

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           +       I A V+ + I  +K G   T R        ++K    +  +  +        
Sbjct: 200 I-DLDPLLISANVSERDINFIKPGSPVTAR-----TSTDEKLLGEVTFVGSLSDATTRT- 252

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                Y V + +      + +  LR G         +  T+    I P
Sbjct: 253 -----YPVEITVP-----NADYRLRAGLTTVASVETQ--TVLAHRISP 288


>gi|325914761|ref|ZP_08177099.1| multidrug resistance efflux pump [Xanthomonas vesicatoria ATCC
           35937]
 gi|325539038|gb|EGD10696.1| multidrug resistance efflux pump [Xanthomonas vesicatoria ATCC
           35937]
          Length = 395

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 87/292 (29%), Gaps = 28/292 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + LL    + +    +     I++    +      + +   + +    + +   A L   
Sbjct: 102 QPLLQIDDRTYQATLQQAEAAIAARQADIAAATANVSAQESSLVQARTQVTAAAASLKFA 161

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q ++     L    A +       +  + ++  +      + K     I           
Sbjct: 162 QAEVKRFAPLAASGADTHEHQESLQHDLARARAQYDAAQAQAKAAESQIQAS-------- 213

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                  +  LEQ Q       +         E   + S I G +  +++     +    
Sbjct: 214 -------TAQLEQAQAGVKQATADADQASIAVEDTRLTSRIHGRV-GDKTVQVGQFLAAG 265

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
              M IVP   L  I A     Q+  ++ G  A +     + ++       +E + P   
Sbjct: 266 TRTMTIVPQESLYLI-ANFKETQVGLMRPGQPAEIEVDALSGVK---LHGKVESLSPGTG 321

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            Q         T  + +V+    ++I  LA  +    L  G   EV    ++
Sbjct: 322 SQFALLPPENATGNFTKVVQRVPVRIRVLAGEEARKVLVPGMSVEVTVDTRS 373


>gi|253990658|ref|YP_003042014.1| multidrug resistance secretion protein [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253782108|emb|CAQ85272.1| multidrug resistance secretion protein [Photorhabdus asymbiotica]
          Length = 392

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 74/222 (33%), Gaps = 22/222 (9%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +     +     +L   + +     +N    +   +L R+ L+  Q DL+  + L  + 
Sbjct: 95  PRDAELALEKAKTALASSVRQTHQQMINSKQYQANIALRRSELTRVQSDLSRREVLGAQK 154

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + + +L      V  +   L   + +       I +   E          ++       
Sbjct: 155 VIGKEELQHAREAVASAKATLDVAVEQYNANQAVILDTPLEKQPAVEQAATDVRNAWL-- 212

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                             ++  I+SP+ G +   +S        ++ PLM I+P     +
Sbjct: 213 ----------------ALQRTKIVSPVDGYVSR-RSVQIGAQINKNTPLMAIIPAYN-MW 254

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           I A     Q+ +++ G  A +    Y   ++K F   I  +D
Sbjct: 255 IEANFKETQLANMRIGQPAEITSDFYG--KDKIFNGKITGLD 294


>gi|188991225|ref|YP_001903235.1| Membrane fusion protein [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167732985|emb|CAP51181.1| Membrane fusion protein [Xanthomonas campestris pv. campestris]
          Length = 413

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 87/292 (29%), Gaps = 28/292 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + LL    + +    +     I++    +      + +   + +    + +   A L   
Sbjct: 120 QPLLQIDDRTYQATLQQAEAAIAAREADIAAATANVAAQESSLVQARTQVASAAASLRFA 179

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q ++     L    A +       +  + ++  +      + K     I           
Sbjct: 180 QAEVKRFAPLAASGADTHEHQESLQHDLERARAQYEAAQAQAKGAQSQIQAS-------- 231

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                  S  LEQ +       +         E   + S I G +  +++     +    
Sbjct: 232 -------SAQLEQAKAGVKQATADADQARVAVEDTRLTSRIHGRV-GDKTVQVGQFLAAG 283

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
              M IVP   L  + A     Q+  ++ G  A +     + ++       +E + P   
Sbjct: 284 TRTMTIVPQQSLYLV-ANFKETQVGLMRPGQPAEIEVDALSGVK---LHGKVESLSPGTG 339

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            Q         T  + +V+    ++I  LA  +    L  G   EV    ++
Sbjct: 340 SQFALLPPENATGNFTKVVQRVPVRIRVLAGEEARKVLVPGMSVEVTVDTRS 391


>gi|187928216|ref|YP_001898703.1| secretion protein HlyD family protein [Ralstonia pickettii 12J]
 gi|187725106|gb|ACD26271.1| secretion protein HlyD family protein [Ralstonia pickettii 12J]
          Length = 429

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 90/297 (30%), Gaps = 32/297 (10%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + QL+                 +     +L   + ++R++Y N        ++  
Sbjct: 87  AIRADDTQLVTSGQPVIELDRADARVALEQAEAALAQTVRQVRTLYSNTSAFTATMAMRE 146

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L+  + DL   K +    AVSQ +++  +  V  +   L     + +       +   
Sbjct: 147 SDLAKAKDDLARRKQIAGTGAVSQEEISHAQTAVQAAQSALEAAKEQLQGNRVLTEQTTL 206

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +        ++                          + ++ + + G +   +S    
Sbjct: 207 ERHPNVLQAAAKVRE------------------AYLAYARTSLPASVTGYVAK-RSVQVG 247

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  PLM IVP     ++ A     Q++H++ G    +    Y       +   +  
Sbjct: 248 QRVAPGTPLMAIVPLD-QLWVDANFKEVQVRHMRVGQPVELVADVYGSSVT--YHGKVVG 304

Query: 370 ID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                       P  +   N ++  +   V + +      D+ + +     A+V   
Sbjct: 305 FSAGTGSAFSLLPAQNATGNWIKVVQRLPVRVSLDPKELKDHPLRVGLSMEAKVDIH 361



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 66/183 (36%), Gaps = 12/183 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT----DLIDLKKVSIKNLR 107
            + NVV++    +G +   + ++   +  G P++  +  +              +++ +R
Sbjct: 70  VQGNVVQVTPQVAGTVVAIRADDTQLVTSGQPVIELDRADARVALEQAEAALAQTVRQVR 129

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFE--SREEQLL--DFLGKYHSTCSKVFNYGISSVYRS 163
                  +    +  +   L KA +  +R +Q+     + +   + ++       S   +
Sbjct: 130 TLYSNTSAFTATMAMRESDLAKAKDDLARRKQIAGTGAVSQEEISHAQTAVQAAQSALEA 189

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQE 220
            K +L   R +   +  LE   ++L+A     +  L   +          V++  +   +
Sbjct: 190 AKEQLQGNR-VLTEQTTLERHPNVLQAAAKVREAYLAYARTSLPASVTGYVAKRSVQVGQ 248

Query: 221 RIV 223
           R+ 
Sbjct: 249 RVA 251


>gi|227819619|ref|YP_002823590.1| exopolysaccharide production protein ExoF2 precursor [Sinorhizobium
           fredii NGR234]
 gi|227338618|gb|ACP22837.1| exopolysaccharide production protein ExoF2 precursor [Sinorhizobium
           fredii NGR234]
          Length = 485

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 63/202 (31%), Gaps = 7/202 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +L+ L+  S+   +  ++ E    + +     ++ +  +     L++          +  
Sbjct: 208 NLLALENTSLLARKARLEAELKNAENIQFPPSLVARQNDRAVALLMEQEQSISRVRREGM 267

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + ++    +     + S       L+ +       + S QK+LT + +L  K   + 
Sbjct: 268 QTQVRALENLREFLEKELAS-------LDAQLVFHDKQIRSIQKELTDVSSLVSKGLAAA 320

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
                 +R + +   E            + I+            Y  E++  L + Q   
Sbjct: 321 PREMSLDRALTQYQSERLTAETSLLRARQEISRTEITILELRNRYTNEVTVTLRETQAEL 380

Query: 274 ADEMSKLTILEKTREQKTILSP 295
                K     +   +  I +P
Sbjct: 381 DALSRKAETAIQLLHESEIAAP 402


>gi|294624166|ref|ZP_06702895.1| colicin V secretion protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292601536|gb|EFF45544.1| colicin V secretion protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 142

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 8/127 (6%)

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
             ++  L+ I+P +             +  ++ G    + +  +   R  + +  I  I 
Sbjct: 3   VDEASQLLVILPRNSKLVAELWAPSSAVGLLQVGKPVDISYDAFPAARYGRQRGKIISIS 62

Query: 372 PIISQQ------DNNLQTQEYYEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLA 423
                         N Q    Y VI+ I D + S        + G         +  +L 
Sbjct: 63  TNAVSALEIGRILGNAQPSSGYRVIVAIDDASSSSFLRRFAAKPGMTLTAKVDVETRSLI 122

Query: 424 QEIIHPI 430
             ++ P 
Sbjct: 123 DWMLRPF 129


>gi|226330136|ref|ZP_03805654.1| hypothetical protein PROPEN_04049 [Proteus penneri ATCC 35198]
 gi|225200931|gb|EEG83285.1| hypothetical protein PROPEN_04049 [Proteus penneri ATCC 35198]
          Length = 332

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 75/203 (36%), Gaps = 13/203 (6%)

Query: 23  LSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + +  I  ++ W     S L P+          + + N + I S   G I    V+  S+
Sbjct: 1   MIVFTITFILLWKNIQLSALNPLSEDA------IIDANKINISSTVPGRISAIYVKENSK 54

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L T +       +   K  +      +  ++  +    +  ++ E   +  +  
Sbjct: 55  VNKGDLLFTIDPTMYALRVQQAKEQLMIAEATLSNKQRIIIAETSNSEITEAQIKRAQVN 114

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL      +     +    +++  + +    T      +     + ++    AL+++   
Sbjct: 115 LLLATQSLNRLEPLLAKGFVTA--QQVDDARTLKHDAEVTLKQAQKQNVASEALINNTDS 172

Query: 198 DLTMMKNLFEKNAVSQNDLNQQE 220
           ++ ++K+L    A+++ +L+  E
Sbjct: 173 EIALVKSLKTSLAMAEWELSNTE 195



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 70/235 (29%), Gaps = 26/235 (11%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L       ++   +     +     +L  K   + +   N    E +    +  L    +
Sbjct: 61  LFTIDPTMYALRVQQAKEQLMIAEATLSNKQRIIIAETSNSEITEAQIKRAQVNLLLATQ 120

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L  ++ L  K  V+   ++    + + + + L++   +       IN    E  L    
Sbjct: 121 SLNRLEPLLAKGFVTAQQVDDARTLKHDAEVTLKQAQKQNVASEALINNTDSEIAL---- 176

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                               + L + E       + +P  G +      S   +    Q 
Sbjct: 177 ---------------VKSLKTSLAMAEWELSNTEVKAPSNGYVAGL-VLSPGEFILSGQS 220

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK-KFKAIIEKID 371
           +  ++ +S   Y  A      + ++K G    V    Y+ I  K   K  +E + 
Sbjct: 221 VFTLI-NSDSWYASAYFKETDLNNIKIGDCVVV----YSMIDSKHPIKGKVEGVS 270


>gi|49474707|ref|YP_032749.1| transport protein transmembrane [Bartonella quintana str. Toulouse]
 gi|49240211|emb|CAF26679.1| transport protein transmembrane [Bartonella quintana str. Toulouse]
          Length = 334

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 71/199 (35%), Gaps = 6/199 (3%)

Query: 16  SLKRMTLLSIIGIIG--LITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
             K   +  + G+ G  LI W+  L P   ++  +     + NV  + S  SG+I +  V
Sbjct: 6   RSKATIIAFLSGVTGVLLILWAWKLPPFVSAIQITNNASVKGNVTLVSSQISGVIARIYV 65

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           ++  ++ +G  L   +D      +   +  + +    + +      FL  + +  E    
Sbjct: 66  QDYQRVEKGMLLFELDDALLRQQLARAQAVLDSKNAKLASVVLQAQFLQGEINTAEAELA 125

Query: 133 SREE---QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                   L           +       S +  +L+ K    + + L R  L+++ +  +
Sbjct: 126 RLRAFSNILPGHKKSSFDDTTSSVARPFSQLLTALETKRQLQKQLELERQSLQSEVAGAK 185

Query: 190 ALLSSHQKDLTMMKNLFEK 208
             +   + +L   K L  K
Sbjct: 186 VGVELAKLNLKHTKILSPK 204



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/334 (11%), Positives = 96/334 (28%), Gaps = 30/334 (8%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           I   +S    +     V          +L  F+     T +      ++ V   +   + 
Sbjct: 2   IKALRSKATIIAFLSGVTGVLLILWAWKLPPFVSAIQITNNASVKGNVTLVSSQISGVIA 61

Query: 170 RMRSIYLNRLD------------LENKSSLLRALLSSHQKDLTMM----KNLFEKNAVSQ 213
           R+      R++            L  + +  +A+L S    L  +    + L  +   ++
Sbjct: 62  RIYVQDYQRVEKGMLLFELDDALLRQQLARAQAVLDSKNAKLASVVLQAQFLQGEINTAE 121

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L +            + +  +  + +         A        K++  + +  Q   
Sbjct: 122 AELARLRAFSNILPGHKKSSFDDTTSSVARPFSQLLTALETKRQLQKQLELERQSLQSEV 181

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A     + + +   +   ILSP  G +    S     Y      L+ ++  S   +I A 
Sbjct: 182 AGAKVGVELAKLNLKHTKILSPKTGHV-GLVSARVGQYVLPGTQLVSLI--SDDIWIIAN 238

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------ 387
               Q+  ++ G           + +       + +  P    + + L+T          
Sbjct: 239 YKETQLSQMRVGQPVVFSVDALNNQK---LTGRVARFAPATGSEFSLLKTDTAIGNFIKI 295

Query: 388 --EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              + ++I+     +   +L  G           
Sbjct: 296 AQRISVRISLDPGQEGAEKLIPGMSVVTYVDTSK 329


>gi|218888040|ref|YP_002437361.1| efflux transporter RND family, MFP subunit [Desulfovibrio vulgaris
           str. 'Miyazaki F']
 gi|218758994|gb|ACL09893.1| efflux transporter, RND family, MFP subunit [Desulfovibrio vulgaris
           str. 'Miyazaki F']
          Length = 430

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 46/386 (11%), Positives = 103/386 (26%), Gaps = 90/386 (23%)

Query: 38  LPIEISVSSSGEILNE-DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
             +   + ++G I  E   +V+  + F+GII+   V+ G  +  G  +   +D E     
Sbjct: 41  ATVRKVLDATGIIKPEVGAIVKTGTRFTGIIRTMHVKVGDAVKAGQIIAEIDDREQRAQQ 100

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           D  + +++  +  +   +++                                 ++     
Sbjct: 101 DQAEATLRKAQSELARVEASYP--------------------------LQIREAEAQMAA 134

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
             + Y    + L R R++    LD  N     +    +    L          A  +  L
Sbjct: 135 AQADYDYAALNLKRRRTLVEQDLDARNTLDEAKQQSETTGNTL----------AARKATL 184

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           ++ +R    +    RE + E ++                                     
Sbjct: 185 DRLQRESTLAIKTAREAVKEAQSA------------------------------------ 208

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA--KV 334
              L           I +P+ G +    +            +  ++     T +     V
Sbjct: 209 ---LEATNVRLSYSVIRAPLDGVVSEVTAQG-GETVVAGFQVANLITVLDPTRLEMWIYV 264

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               +  +  G T   R               + +I P    Q        YY  ++++T
Sbjct: 265 DETDVGQITPGMTVEFRVDSLPGRTFG---GTVNQIYP----QPEIRDNIVYYRALVRLT 317

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNT 420
               +D    LR     +     +  
Sbjct: 318 PQTSTD----LRPEMTTQCRIVVQQK 339


>gi|148263218|ref|YP_001229924.1| secretion protein HlyD family protein [Geobacter uraniireducens
           Rf4]
 gi|146396718|gb|ABQ25351.1| secretion protein HlyD family protein [Geobacter uraniireducens
           Rf4]
          Length = 328

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 49/372 (13%), Positives = 99/372 (26%), Gaps = 82/372 (22%)

Query: 48  GEILNEDNVVEIKSPFS----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           G +    N+  I    S    G +K+  V+ G  +  G  +   +  +        +  +
Sbjct: 32  GTVHVSGNIEVIAVEASFKVPGRVKERPVDEGEMVRPGQLIARLDSEDF-------EHEV 84

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              R   +  ++ L  L       E A         +   K   T               
Sbjct: 85  SRTRSEAEAMRAVLAELEAGSRPEEIAQARAALARAESEAKRLDT--------------- 129

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                                             +    K LF K  + Q +L+      
Sbjct: 130 ----------------------------------EYRREKALFAKEVIPQRELDTARTAY 155

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             S    RE                                 ++Q +    +  + L + 
Sbjct: 156 ETSQAVAREAR-----------------EAFILVRKGPRRERIDQARARLREAEAALALA 198

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +      T+ + +AG ++               P++ +   +     RA +    +  VK
Sbjct: 199 QTRLGYTTLTATLAGLVLSKNV-EPGEQVAAGTPVITVGDINNTWL-RAYIAETDLGRVK 256

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G  A V          K ++  +  I P       N+QT++    ++    +   +  +
Sbjct: 257 VGQKAQV---TTDTWPGKVYEGRVSFISPEAEFTPKNVQTEKERVKLVYRIKITIPNPQM 313

Query: 404 ELRNGFPAEVLF 415
           EL+ G PA+   
Sbjct: 314 ELKPGMPADAEI 325


>gi|293372553|ref|ZP_06618935.1| efflux transporter, RND family, MFP subunit [Bacteroides ovatus SD
           CMC 3f]
 gi|292632362|gb|EFF50958.1| efflux transporter, RND family, MFP subunit [Bacteroides ovatus SD
           CMC 3f]
          Length = 415

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 25/202 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+   RL L+ +   L   L   Q+     K L  
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQERLQLKQERIGLNKELIGKQRRYEQYKRLVN 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  +++ D  Q E                 K  L  I+E   + ++   + +  +  ++ 
Sbjct: 168 EQLIAREDYRQAEEEYI-----------AAKEQLAVIDERIRQDHIFRESQIGSLDENIR 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+ A    +L       E   + +PI G +    +          + + +I+  +  
Sbjct: 217 NMKRSLALVRERL-------ENLKVKAPIDGQVGNLNA-QIGQSISAGEHIGQII--TSN 266

Query: 328 TYIRAKVTPKQIQHVKKGYTAT 349
             ++A++    ++ V  G  A 
Sbjct: 267 LKVQAQIDEHYVERVLPGLPAD 288



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/215 (11%), Positives = 76/215 (35%), Gaps = 21/215 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G+++    ++ + +   G +++   E G+ +  G  +L   +       +++   +
Sbjct: 62  IRVIGQVMPS-RIIYMDAIEGGRVEERLKEEGAMVKAGDVILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++  ++N R  ++ E+  L       +      + R EQ    + +            
Sbjct: 121 AYQENELRNTRISMEQERLQLKQERIGLNKELIGKQRRYEQYKRLVNEQLIAREDYRQAE 180

Query: 157 IS--SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +    L +   R+R  ++ R   E++   L   + + ++ L +++   E       
Sbjct: 181 EEYIAAKEQLAVIDERIRQDHIFR---ESQIGSLDENIRNMKRSLALVRERLEN------ 231

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
              + +  +      L   I +  +   HI ++  
Sbjct: 232 --LKVKAPIDGQVGNLNAQIGQSISAGEHIGQIIT 264


>gi|254516536|ref|ZP_05128595.1| RND efflux membrane fusion protein [gamma proteobacterium NOR5-3]
 gi|219674959|gb|EED31326.1| RND efflux membrane fusion protein [gamma proteobacterium NOR5-3]
          Length = 345

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 63/171 (36%), Gaps = 11/171 (6%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +  + ER    + L   E   E   + +   E   +  L      ++    +EQ +   A
Sbjct: 105 ERLRAERGQVMAKLTAAETALEIAQIDKRRMEKLFDEGLSARREFEQARIRVEQLRADVA 164

Query: 275 DEMSKLTILEKTREQKTI---LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
              ++L+ ++    ++++    +P  GTI+   +  ++ +    Q +   VP +    I 
Sbjct: 165 QAGAELSRVDVNLSRQSVQIVRAPRDGTILRVNAGDAATFISAGQVVATFVPDNAERAIE 224

Query: 332 AKVTPKQIQHVKKGYTATVRF--------PHYADIREKKFKAIIEKIDPII 374
             +  + I  V++G    ++F          +  +    F   +  IDP  
Sbjct: 225 MFIDGRDIALVREGAKVRIQFEGWPVIQISGWPSVAVGTFSGHVIAIDPTA 275



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 62/169 (36%), Gaps = 4/169 (2%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKF 70
           P   + + +  +   + +  +   +P   + S  G +      D + EI +   G I+++
Sbjct: 20  PRVARVVGIGLLFFFVAVGLFLAFVPWVQTASGPGNVTALNPNDRMQEINALVPGRIQEW 79

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V +GS++  G P++   D +   L++  +     +   +   ++AL+        +EK 
Sbjct: 80  YVRDGSRVKVGDPIVKIVDNDPQ-LLERLRAERGQVMAKLTAAETALEIAQIDKRRMEKL 138

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           F+       +F            +   +    S        +S+ + R 
Sbjct: 139 FDEGLSARREFEQARIRVEQLRADVAQAGAELSRVDVNLSRQSVQIVRA 187


>gi|148258268|ref|YP_001242853.1| hypothetical protein BBta_7064 [Bradyrhizobium sp. BTAi1]
 gi|146410441|gb|ABQ38947.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 340

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 91/263 (34%), Gaps = 25/263 (9%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND----LNQQERIVYKSTL 228
              L   D E ++ L  A   +  +     K      A  +      +   +  V+ +  
Sbjct: 83  QALLRLTDAEARAQLASAEAQAAMRKRVRNKESTPSGAGPRRRAEDGVADAQAAVFDART 142

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE------------ 276
            L + + E +   R  +   + A  + AN   ++ +  ++ ++  AD             
Sbjct: 143 ALDKAVAE-RRAGRGADGDVESARTQLANAQAKLEQQADELRKVTADAPLPVSVEGQLNV 201

Query: 277 -MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKLTYIRAK 333
             S L     T E+ TI +P+ GT++   + +    A    +QPL+ +        +RA+
Sbjct: 202 ARSDLQGARATLEKLTIRAPLDGTVLQVNARA-GEIAAPQATQPLVLLG-DMSALRVRAE 259

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +  + +  +K G  A VR   +   R +     +  I P++        +Q     +  +
Sbjct: 260 LDQRDLDKIKVGQQAVVRSDAF---RGRDIAGKVASIAPLVESSRTAALSQRNMTDVDVV 316

Query: 394 TDLAFSDNNIELRNGFPAEVLFT 416
             L           G   +V F 
Sbjct: 317 EVLVDLAEPGPFAVGMKVDVYFR 339



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/199 (11%), Positives = 63/199 (31%), Gaps = 2/199 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
             + G +     ++++ +P    I +  V+ G  +  G  LL   D E    +   +   
Sbjct: 45  AVAPGRVEPASGLIKLGAPVVAPILEVLVKPGETVFAGQALLRLTDAEARAQLASAEAQ- 103

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             +R  +  ++S       +    +   +++            +   +    G      S
Sbjct: 104 AAMRKRVRNKESTPSGAGPRRRAEDGVADAQAAVFDARTALDKAVAERRAGRGADGDVES 163

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            + +L   ++    + D   K +    L  S +  L + ++   + A +  +       +
Sbjct: 164 ARTQLANAQAKLEQQADELRKVTADAPLPVSVEGQLNVARSDL-QGARATLEKLTIRAPL 222

Query: 224 YKSTLELRENIHEQKNMLR 242
             + L++     E      
Sbjct: 223 DGTVLQVNARAGEIAAPQA 241


>gi|284037444|ref|YP_003387374.1| efflux transporter RND family, MFP subunit [Spirosoma linguale DSM
           74]
 gi|283816737|gb|ADB38575.1| efflux transporter, RND family, MFP subunit [Spirosoma linguale DSM
           74]
          Length = 356

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 65/201 (32%), Gaps = 21/201 (10%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLEQNQRTFADEMSKL 280
           +    +    ++    + + N    +        LKE       D E+      +  ++ 
Sbjct: 95  QLIASIEPTDYQLGVTIANANVARVQDEYNRLTILKERGSVTPSDYEKVVTGLDEVKARQ 154

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +  K   +  + SPI+G +    +        Q QPL +I    +   +R  V   ++ 
Sbjct: 155 QLAAKNLRETKLYSPISGIVARKGAN-PGEIIPQGQPLFQIA-DIQPIKVRVSVPESEVG 212

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            ++ G +A V  P         +   I  I  +             Y V + +      +
Sbjct: 213 QLRLGQSAQVTIPAIN----GTYTGKISLIGAVADPASRA------YSVKIDLP-----N 257

Query: 401 NNIELRNGFPAEVLFTAKNTT 421
             +++R G  A+    +   +
Sbjct: 258 PKLQIRPGMIADARIPSARQS 278


>gi|224367696|ref|YP_002601859.1| macrolide-specific efflux protein (RND family protein)
           [Desulfobacterium autotrophicum HRM2]
 gi|223690412|gb|ACN13695.1| macrolide-specific efflux protein (RND family protein)
           [Desulfobacterium autotrophicum HRM2]
          Length = 407

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 82/236 (34%), Gaps = 18/236 (7%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
             S  +  LL  +   +   + L     + Q+             L+ +  + + ++  R
Sbjct: 74  QVSGTIEQLLVDYNDQVKKGQVLAR---LDQSSFTASVNKAKADVLKAQAELKQAEDEFR 130

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
               L+D+  +    +L  I+  ++  + +     + L   +   E   I SPI GT++ 
Sbjct: 131 RNAPLFDKGYISEQEFLP-ITTAVDTTKASLQSAEASLEQAQIDLEHTVIRSPIDGTVID 189

Query: 303 NQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
               +    A    +  L  I        I  +V    I  +++G +       Y D   
Sbjct: 190 RSVDAGQTVAASLSTPTLFLIAEDLSRMQIETQVDETDIGQIRQGQSVRFTVQSYFDQN- 248

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             F   + +I  +  +  +N+ T   Y VI+  T+ +       L  G  A V F 
Sbjct: 249 --FIGSVRQI-RLQPETVDNVVT---YTVIVDATNES-----GRLMPGMTATVDFV 293



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 73/216 (33%), Gaps = 23/216 (10%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSIL-------------------LPIEISVSSSGEI 50
           KR    ++K + +L  +  + ++ W                        +E+ V+S+G +
Sbjct: 4   KRKTSRTIKSVIVLIGVLSLTILVWWAWMHQESSRTKPSFKFAQVNRGKLEVLVTSTGTL 63

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
              + V EI +  SG I++  V+   Q+ +G  L   +    T  ++  K  +   +  +
Sbjct: 64  AAVETV-EIGTQVSGTIEQLLVDYNDQVKKGQVLARLDQSSFTASVNKAKADVLKAQAEL 122

Query: 111 DTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
              +         +D   + E+ F      +        S  + +    I   +  ++  
Sbjct: 123 KQAEDEFRRNAPLFDKGYISEQEFLPITTAVDTTKASLQSAEASLEQAQIDLEHTVIRSP 182

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +                +SL    L    +DL+ M+
Sbjct: 183 IDGTVIDRSVDAGQTVAASLSTPTLFLIAEDLSRMQ 218


>gi|323162231|gb|EFZ48090.1| multidrug resistance protein K [Escherichia coli E128010]
          Length = 351

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 81/269 (30%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +    YL       + +  R       +D      L ++  +S+  
Sbjct: 57  ALNKAKNNLANIVRQTNKPYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 116

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K        L     L     + E +   ++       
Sbjct: 117 LEHTKDTLISSKAALNAAIQAYKAN----KALVMNTPLNRQPQVVEAADATKETWLAL-- 170

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 171 ------------KRTDIRSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 216

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 217 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 274

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 275 RVPVEVSLDPKELMEHPLRIGLSMTATID 303


>gi|160889739|ref|ZP_02070742.1| hypothetical protein BACUNI_02169 [Bacteroides uniformis ATCC 8492]
 gi|156860731|gb|EDO54162.1| hypothetical protein BACUNI_02169 [Bacteroides uniformis ATCC 8492]
          Length = 409

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 74/221 (33%), Gaps = 18/221 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQ--KNMLRHINELYDEANLEFANYLKEISRDL 266
             +++ D    +  +            E   +  L   N+  +E  L  A   ++   + 
Sbjct: 86  QLIAEMDRVTLQSELASQRAAYNGAKAEYEYQKKLYERNKTLNEKQLIAATDYEQSVYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ +  +    + L   E+     TI SPI G ++  +   +            L  I  
Sbjct: 146 EKAKSNYESSQASLAKAERNLSYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI----DPIISQQDN 379
                 + A V    I  V++G  AT     Y +     F+ ++ +I        S    
Sbjct: 205 DLTQMQVVADVDEADIGGVEEGQRATFTVDAYPND---VFEGVVTQIRLGDASSSSTSST 261

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +  T   YEV++     +  + +++L+    A V     + 
Sbjct: 262 STSTVVTYEVVI-----SAHNPDLKLKPRLTANVTIFTLDR 297



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 23/176 (13%)

Query: 18  KRMTLLSIIGII--GLITW---------------SIL--LPIEISVSSSGEILNEDNVVE 58
           KR+ L+++  +I  G   W               + +    I  SV+++G I     V E
Sbjct: 4   KRIILIAVAAVIIVGGGVWLFGGAKAKHKVTYATATIHKGEISESVTATGTIEPVTEV-E 62

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SGII K  V+  S + +G  +   + +     +  ++ +    +   + +K   +
Sbjct: 63  VGTQVSGIIDKIHVDYNSVVTKGQLIAEMDRVTLQSELASQRAAYNGAKAEYEYQKKLYE 122

Query: 119 F---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
               LN K  +    +E            Y S+ + +     +  Y ++   +  +
Sbjct: 123 RNKTLNEKQLIAATDYEQSVYNYEKAKSNYESSQASLAKAERNLSYATITSPIDGV 178


>gi|330996849|ref|ZP_08320718.1| auxiliary transport protein, membrane fusion protein family protein
           [Paraprevotella xylaniphila YIT 11841]
 gi|329572292|gb|EGG53951.1| auxiliary transport protein, membrane fusion protein family protein
           [Paraprevotella xylaniphila YIT 11841]
          Length = 363

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 112/360 (31%), Gaps = 85/360 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+        + +G  LL  +D E    +   + ++K+         ++L    N 
Sbjct: 75  SGYIKRIYFTEHQDVHKGDTLLVLDDREYKIRVMEAEAALKDALAGQTIIGASLQTTQNT 134

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             V + +                                 ++++L ++        +L  
Sbjct: 135 ASVYDASIS------------------------------EIEIRLAKLEKDRQRYENLVK 164

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +++     L   + +    +                         +L     ++   L  
Sbjct: 165 RNAATPIQLEQIETEYEATRK------------------------KLEATKRQRMAALSG 200

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +NE+               S +    + T A EM+KL           +++P  G  +  
Sbjct: 201 VNEVSHRRQ----------SAEAAIQRATAALEMAKLN-----LSYTVVVAPCDGK-LGR 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++     Y    Q +  I+P ++   + A     QI+++  G   ++       + +K F
Sbjct: 245 RALEEGQYISAGQTITYILPDTQKWVV-ANYKETQIENLSVGQEVSITVDA---VSQKTF 300

Query: 364 KAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
              I  I           P  +   N ++ Q+   V +  T+L+  DN  +L  G    V
Sbjct: 301 SGKITAISGATGSKYSLVPTDNSAGNFVKIQQRIPVRIDFTNLSKEDNE-KLAAGMMVIV 359


>gi|262363045|gb|ACY59766.1| multidrug resistance protein A [Yersinia pestis D106004]
          Length = 389

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 86/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +   +L +  LS  Q DL     L     + +
Sbjct: 97  EQAFEQAKTALANSVRQTHQLIINSKQYQANIALKKTELSQAQNDLKRRVVLGAAAVIGR 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +   L                  D A  ++      +     + Q   
Sbjct: 157 EELQHARDAVEAAQASL------------------DMAVQQYNANQALVLNTPLEKQPAI 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+     T ++  ++SPI+G +   +S           PLM +VP     +I A 
Sbjct: 199 EQAAAKMRDAWLTLQRTKVVSPISGYVSR-RSVQVGAEISSGTPLMAVVPAD-QLWIDAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G  AT+    Y D     ++  +  +D          P  +   N ++ 
Sbjct: 257 FKETQLANMRIGQPATIVTDFYGDDV--VYQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 314

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V + + +    ++ + +
Sbjct: 315 VQRLPVRIALDEKQLKEHPLRI 336



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 59/174 (33%), Gaps = 10/174 (5%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH--- 109
             N V+I S   G +     EN   +  G  L+T +  +     +  K ++ N       
Sbjct: 57  SGNQVQIMSQVPGSVVSVHFENTDFVKSGDVLVTLDPTDAEQAFEQAKTALANSVRQTHQ 116

Query: 110 --IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             I++++   +    K ++ +   + +   +L           +     + +   SL M 
Sbjct: 117 LIINSKQYQANIALKKTELSQAQNDLKRRVVLGAAAVIGREELQHARDAVEAAQASLDMA 176

Query: 168 LTR--MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF---EKNAVSQNDL 216
           + +       +    LE + ++ +A        LT+ +          VS+  +
Sbjct: 177 VQQYNANQALVLNTPLEKQPAIEQAAAKMRDAWLTLQRTKVVSPISGYVSRRSV 230


>gi|113953738|ref|YP_731955.1| RND family efflux transporter MFP subunit [Synechococcus sp.
           CC9311]
 gi|113881089|gb|ABI46047.1| efflux transporter, RND family, MFP subunit subfamily
           [Synechococcus sp. CC9311]
          Length = 389

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 73/222 (32%), Gaps = 14/222 (6%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL------K 260
           E   V+Q  L +  + V K  + L  +  ++   L        EA +E A Y        
Sbjct: 76  ESGIVTQV-LIKAGQKVQKGQVMLVLDHKKEAAALDTARAKAQEAKIESARYKLLADQGA 134

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
               D E+ +       +     E     + I +P  G +      +   Y  Q   +M 
Sbjct: 135 ASREDAEEKKVGAIAAANTAIEKEVQLSYRYIKAPFDGVVGSGFIVNVGTYVNQGDQIMS 194

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +V ++   ++   V   Q + ++ G    + +           +  ++ + P +  +   
Sbjct: 195 LV-NNDELFVSMNVPSGQAKSIQLGQATRI-YSA--GSDFALAEGQVDYVAPFLDYKIEG 250

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
                   + +     +FS+  + L+ G  + V       +L
Sbjct: 251 DSGSPLNTLTV---QASFSNVQVGLKPGELSRVEIQTGVRSL 289



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 1/88 (1%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
             V++ G I+ ++N V  K   SGI+ +  ++ G ++ +G  +L  +  +    +D  + 
Sbjct: 56  QVVNAEG-IIGDNNYVPFKPSESGIVTQVLIKAGQKVQKGQVMLVLDHKKEAAALDTARA 114

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +  +      K   D      +  E+
Sbjct: 115 KAQEAKIESARYKLLADQGAASREDAEE 142


>gi|71906805|ref|YP_284392.1| secretion protein HlyD [Dechloromonas aromatica RCB]
 gi|71846426|gb|AAZ45922.1| Secretion protein HlyD [Dechloromonas aromatica RCB]
          Length = 412

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 77/240 (32%), Gaps = 18/240 (7%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
             S  ++ L       ++  + L E   + Q+ L    R    + + L+ ++   K    
Sbjct: 68  QVSGTVKKLYVDFNDKVSAGQKLVE---LDQSLLQTIVRQSQANVVNLQSSLDLAKANEA 124

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +  L  +  +   +Y     + L+  Q       +     +       I SP++G +V 
Sbjct: 125 RMKSLLAKEYVSRQDYDV-ALQGLKSAQAQLVQAKAAADKDQVNLGYSVITSPVSGVVVA 183

Query: 303 NQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                    A   Q   L++I        I        I ++K+          + +   
Sbjct: 184 RLVDIGQTVAASFQTPVLIQIAQDLSKMAIDTSFAEADIGNIKEKLPVRFTVDAFPNRN- 242

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             F   +++I    + Q N +     Y V +++      + ++ L  G  A V    +  
Sbjct: 243 --FHGEVQQIRLNPTNQQNVVT----YNVRIRVD-----NPDLTLLPGMTAYVNIGVQKR 291



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 54/142 (38%), Gaps = 3/142 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFL 120
           SG +KK  V+   ++  G  L+  +      ++   + ++ NL+  +D     ++ +  L
Sbjct: 70  SGTVKKLYVDFNDKVSAGQKLVELDQSLLQTIVRQSQANVVNLQSSLDLAKANEARMKSL 129

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             K  V  + ++   + L     +     +      ++  Y  +   ++ +    L  + 
Sbjct: 130 LAKEYVSRQDYDVALQGLKSAQAQLVQAKAAADKDQVNLGYSVITSPVSGVVVARLVDIG 189

Query: 181 LENKSSLLRALLSSHQKDLTMM 202
               +S    +L    +DL+ M
Sbjct: 190 QTVAASFQTPVLIQIAQDLSKM 211


>gi|150017768|ref|YP_001310022.1| secretion protein HlyD family protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149904233|gb|ABR35066.1| secretion protein HlyD family protein [Clostridium beijerinckii
           NCIMB 8052]
          Length = 328

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 83/242 (34%), Gaps = 33/242 (13%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                 +      +A     +K+    K LF+ +A ++  L   ++ +  +         
Sbjct: 120 EQISQAQAALDSAKATYDVAKKNYDRTKALFDASAATEVQLETAQQQLTSAE-------S 172

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            QK+    +  L + A     +  K      E+           +   +      +I +P
Sbjct: 173 GQKSAEEQLEMLKNGATETSIDVYKAQVHQAEEA----------VKTAQVALNNGSITAP 222

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           I+G +           A     L+ I  +     + A    + ++ +++G    V+    
Sbjct: 223 ISGKVTVKNIN-KGEMAAPGSTLISIS-NPDALCVNAYAPLRLVKDLEEGQAVEVKVSEI 280

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            D    +F+  I  I+  ++ Q++N+       V + +TD     +  +L+ G  AEV  
Sbjct: 281 EDS---EFEGTISVINSTLNSQNSNV------LVKIVLTD-----SKGQLKPGMFAEVGI 326

Query: 416 TA 417
             
Sbjct: 327 KG 328



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 52/164 (31%), Gaps = 5/164 (3%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G I  ++ V  + S  S  +    V  GS + QG  ++  +    T  +  +    +   
Sbjct: 49  GRIETDNQV-NVSSKISARVSDVLVNVGSTVNQGDAVIKLD----TQDLQAQVDQAQAAV 103

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
              +   +          + +        +    + K +   +K      ++    L+  
Sbjct: 104 NTANANLNNAMNSTQPEQISQAQAALDSAKATYDVAKKNYDRTKALFDASAATEVQLETA 163

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             ++ S    +   E +  +L+   +    D+   +    + AV
Sbjct: 164 QQQLTSAESGQKSAEEQLEMLKNGATETSIDVYKAQVHQAEEAV 207


>gi|310778185|ref|YP_003966518.1| secretion protein HlyD family protein [Ilyobacter polytropus DSM
           2926]
 gi|309747508|gb|ADO82170.1| secretion protein HlyD family protein [Ilyobacter polytropus DSM
           2926]
          Length = 442

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 53/357 (14%), Positives = 112/357 (31%), Gaps = 55/357 (15%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++ K  V+ GS++  G  LL F                   +  ++              
Sbjct: 67  VVDKILVDEGSEVSAGDSLLEFS---------------AGSKLELE-------------- 97

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                   RE Q+LD   K      +  N G + +   L  K   ++S+      +    
Sbjct: 98  --------RELQMLDLDMKSVEMQIEDLNSGSTKL--ELDNKQLEIKSLEEEIKGMNRNL 147

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            ++     + ++   +  +L ++  VS  + N+      +  +EL     + K  L    
Sbjct: 148 KVVSFEAQTFRQQADVKMDLLKQQGVSSVEANEALSDANRKEMELE----DLKTSLDLSR 203

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK--TILSPIAGTIVYN 303
           + Y+   L +    +E++      +        K   L +   +    + SPI G I   
Sbjct: 204 QKYELMVLSYDRLKRELNLQENNIKGNLKKFALKRDDLAEKLAKVGEPLKSPIDGIITGI 263

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                    +    LM+I    +   I+ ++   Q + V  G  AT+         +  +
Sbjct: 264 YI-EQGTPVRAGSRLMEISKMGEN-KIKMEIPVYQAKWVIPGQKATI--TMRESAEDVTY 319

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              +E +                 EV + +      +N+  L+ G+   V     + 
Sbjct: 320 DGKVESVSKTAKVVKTGNYEDRIIEVEVSL------ENSQGLKPGYATTVEIAGNSK 370


>gi|296282779|ref|ZP_06860777.1| secretion protein HlyD family protein [Citromicrobium bathyomarinum
           JL354]
          Length = 321

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 100/340 (29%), Gaps = 39/340 (11%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           ++      +  +   +        TE    DF   +   L    +    Q     G  +S
Sbjct: 13  DETTNNAYVRGRTTVVSPQVAGYLTEVPVTDFQRVEEGDLLARIDDAPFQQKVLQGSANS 72

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              +      +   RS + +L                 +  RA L   Q D+  +  L +
Sbjct: 73  AAQQAALANSAQSLRSAQAQLKLQ----------TAAVTSARAALQKAQADMNRIAELVD 122

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           + +VS      +ER   ++ L+  +   +Q    R I           A  ++ ++    
Sbjct: 123 EGSVSL-----RERDQARAALQQAQAGVQQAEAQRAIA----------AENVRSVTVGRG 167

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +   A   +   + E    +  I +P +G +    +            LM IVP    
Sbjct: 168 GLEAQVAGAEASKDLAEIELSRTEIRAPRSGRLSEITAR-VGQLVSAGTQLMYIVP--DE 224

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQT 383
            ++ A     Q   +  G  AT+       +   +    ++ I P  S +      +   
Sbjct: 225 LWVVANFKETQTAEMAVGQRATLEVDALGGL---ELTGRVQSIAPAASSEFSIVKPDTGA 281

Query: 384 QEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFTAKN 419
             + +V  +I      D        L  G         K+
Sbjct: 282 GNFVKVPQRIAVRIVLDKGQKAAKRLGPGMSVVATVHTKD 321


>gi|169832239|ref|YP_001718221.1| RND family efflux transporter MFP subunit [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169639083|gb|ACA60589.1| efflux transporter, RND family, MFP subunit [Candidatus
           Desulforudis audaxviator MP104C]
          Length = 379

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 73/210 (34%), Gaps = 19/210 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNML-RHINELYDEANLEFANYLKEISRDLEQNQ 270
           ++  +   E  ++++ L  ++   + + M   H      +A+ E A    +++RD  +N 
Sbjct: 107 AEAGVAAAESGLFQAELAFKQAQADYERMKFLHDQGAIPDADFEKAELNFKLARDRAENL 166

Query: 271 R--TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
                     +L  +       T+ SP++G +           A    P++ ++    L 
Sbjct: 167 APAQLQQARGQLEFVRANYNNATLTSPVSGLVAARNVN-PGEMASPGVPVLTLI-DIDLV 224

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +    + K +  +K G    VR         +     +  I P    +         Y 
Sbjct: 225 RVEVNASEKLVNQIKVGQEVRVRVAA---ASAEPLTGKVVSIAPAADARART------YP 275

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           V +++ +         L+ G  AEV F  +
Sbjct: 276 VKVELPNPGHL-----LKAGMFAEVDFGTE 300



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/148 (8%), Positives = 46/148 (31%), Gaps = 3/148 (2%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
               +   +  + +  +      +G++     V  +    +G +    V+ G ++  G  
Sbjct: 33  GAAAVPVFVAQAEMGRLSRGDVLTGKVAPRTEVKLV-PKMAGKVAAVTVDVGDRVRAGQT 91

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           ++  + +E    +   +  +      +   ++ L F   + D     F   +  + D   
Sbjct: 92  VVLLDAVELRAQLTQAEAGVAAAESGLF--QAELAFKQAQADYERMKFLHDQGAIPDADF 149

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           +      K+      ++  +   +    
Sbjct: 150 EKAELNFKLARDRAENLAPAQLQQARGQ 177


>gi|319409364|emb|CBI83008.1| secretion protein [Bartonella schoenbuchensis R1]
          Length = 327

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 74/198 (37%), Gaps = 3/198 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           + R   +    +  +S I  I LI W+  L P   ++  +     + +V  +    SG++
Sbjct: 1   MIRALRSKATIVAFISGIFGILLILWAWKLPPFVSTIQITDNASVKGDVTLVSPQISGVV 60

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  +++  ++ +GT L   +D      +   +    +    + +       L  + D  
Sbjct: 61  TQIYIQDYQRVEKGTVLFELDDTLFRQQLSQAQAIFDSKNAKLASVLLQTQLLQEEIDAA 120

Query: 128 EKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           E      ++   +   +    +  +      +S +  +L++K    + + L R  L++  
Sbjct: 121 ESELAHLQKLSNISSEMKSLRTDEASRPPSSLSQLLATLEVKRRLQKQLDLERQSLQSDV 180

Query: 186 SLLRALLSSHQKDLTMMK 203
           +  +  +   + +L   K
Sbjct: 181 AGAKVGVELAELNLAHTK 198



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 78/248 (31%), Gaps = 15/248 (6%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R  L    ++  +  +     L   + L E+   ++++L   +++   S+        E 
Sbjct: 86  RQQLSQAQAIFDSKNAKLASVLLQTQLLQEEIDAAESELAHLQKLSNISSEMKSLRTDEA 145

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 +++L     ++     K++  + +  Q   A     + + E       I+SP A
Sbjct: 146 SRPPSSLSQLLATLEVKR-RLQKQLDLERQSLQSDVAGAKVGVELAELNLAHTKIVSPCA 204

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +          Y      L+ ++  S   +I A     Q+ H++ G           +
Sbjct: 205 GQV-GLVGARVGQYVLPGTQLVAVI--SDDIWIVANYKETQLAHMRVGQPVVFFVDALNN 261

Query: 358 IREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNI---ELRNGF 409
            +       + +  P    +      N     + ++  +I+  +A     I    L  G 
Sbjct: 262 QK---LTGRVVRFAPATGSEFSLLKTNTAIGNFTKIAQRISVRIALDPGQIGAERLIPGM 318

Query: 410 PAEVLFTA 417
                   
Sbjct: 319 SVVTYVDT 326


>gi|331004077|ref|ZP_08327559.1| hypothetical protein HMPREF0491_02421 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411663|gb|EGG91071.1| hypothetical protein HMPREF0491_02421 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 575

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 57/420 (13%), Positives = 125/420 (29%), Gaps = 55/420 (13%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   +SSSG I  + +   I +  SG I       G  + +   L   +       I+  
Sbjct: 46  ISSEISSSGTITPK-DTYNITALISGDIIAADFNIGDTVSKDQVLYQIDKSSIESDINSS 104

Query: 100 KVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESREEQL--------LDFLGKYH 146
             S+            D EK+  +F  N Y    + +                     Y+
Sbjct: 105 NNSLSKANTGYASATKDYEKAKSEFSGNLYRSTRRGYIKELSIQSGDKISGGTKLATIYN 164

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                +    +S   +++   +T   ++      +E +   + + +        +++N+ 
Sbjct: 165 DNVMNIRIPFLSPEAQNITAGMTGTLTLTETGEQIEGRVLSV-SSMDQTLDGGRLVRNVT 223

Query: 207 EK-----NAVSQNDLNQQERIVYKS-------------TLELRENIHEQKNMLR-----H 243
            +         +   N     +  +             + +L E +  +K ++       
Sbjct: 224 FEVTNPGGLTDKTTANATVGEMTSTGDGTFEASTNVDMSADLAEGVEIEKVLVNVGDFIE 283

Query: 244 INELYDEANLEFANYLKEISRDLEQN-QRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
           +     +   E A+ L +  RD     Q         +   +KT ++ TI SPIAG ++ 
Sbjct: 284 VGTPIFKMTSESADKLLKTYRDAVDTAQGNVDAAKKGVDTAKKTYDEYTIKSPIAGKVIS 343

Query: 303 NQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
                              M ++        +  V  K I  V+ G    ++   + D  
Sbjct: 344 KNYKVGDKVGSSGSNKATTMAVIYDMSSYTFKMSVDEKDITKVQSGQKVRIKSDAFPDQD 403

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                  +  +    + Q+        Y V + + +         L  G   +   T ++
Sbjct: 404 Y---SGTVTNVSLESTSQNGVST----YPVTITLDETY------NLLPGMNVDGYITLES 450


>gi|189218430|ref|YP_001939071.1| Multidrug resistance efflux pump [Methylacidiphilum infernorum V4]
 gi|189185288|gb|ACD82473.1| Multidrug resistance efflux pump [Methylacidiphilum infernorum V4]
          Length = 347

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 62/207 (29%), Gaps = 26/207 (12%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLEQNQRTFADEMSKL 280
           +  +E+    ++ +  L   N    E   +    +   S      ++          + L
Sbjct: 114 QLLIEIDPRDYQSRVALAQANRDLAETEWKRMKEILRSSAVSQLQVDAAWAIKLSTEAYL 173

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            + E       I +P  G I   ++     Y +  Q L  IVP     ++ A     QI 
Sbjct: 174 RLNELQLGYTRIYAPEDGRIT-MRTVEKGQYVEVGQTLFDIVPPE--LWVVANYKETQIT 230

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-- 394
           +++ G   T+R   Y   R    K  I+ I      Q         T  Y +V+ ++   
Sbjct: 231 YMRPGQPVTIRIDAYPHRRY---KGHIDSIQRGSGAQFSLLPPENATGNYVKVVQRVPVK 287

Query: 395 --------DLAFSDNNIELRNGFPAEV 413
                             +      EV
Sbjct: 288 ILFDEPLNKEEIVGPGFSVVP--TVEV 312


>gi|317493090|ref|ZP_07951514.1| efflux pump membrane protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316919212|gb|EFV40547.1| efflux pump membrane protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 342

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/243 (12%), Positives = 80/243 (32%), Gaps = 24/243 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     + +          ++++   + +    +++   N   +       +AL+     
Sbjct: 76  LFRIDPRPYQAMLDDAKARLTTLDAQIALTQRTIKAQEYNAQSVTAAVERAKALVKQTTS 135

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
               ++ L  +   SQ DL+Q       +  EL   + + K     +             
Sbjct: 136 TRARLEPLVPQGFASQEDLDQARTAEKAARAELEATLLQAKQASAAV------------- 182

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                   ++      A  ++++ + E   E   + +P  G +V  ++ +   YA   +P
Sbjct: 183 ------TGVDAMVAQRAGILAQIALAELHLEFTEVRAPFNGIVVALKT-TIGQYASALKP 235

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +  ++   +  Y+ A      +++V  G  A V          K F  +++ +   +   
Sbjct: 236 VFTLM-DDEHWYVIANFRETDLKNVHSGVPARVTV---MTNHGKSFSGVVDSVGSGVLPD 291

Query: 378 DNN 380
             +
Sbjct: 292 GGS 294



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 52/184 (28%), Gaps = 7/184 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I +  + +  ++ +G  L   +      ++D  K  +  L   I   +  +      
Sbjct: 56  SGRIVEMPIRDNQRVKKGDLLFRIDPRPYQAMLDDAKARLTTLDAQIALTQRTIKAQEYN 115

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              +  A E  +      L K  ++        +   + S +       +    R +LE 
Sbjct: 116 AQSVTAAVERAKA-----LVKQTTSTRARLEPLVPQGFASQEDLDQARTAEKAARAELEA 170

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   ++      M+        ++Q  L +      +        +   K  +  
Sbjct: 171 TLLQAKQASAAVTGVDAMVAQ--RAGILAQIALAELHLEFTEVRAPFNGIVVALKTTIGQ 228

Query: 244 INEL 247
               
Sbjct: 229 YASA 232


>gi|237748665|ref|ZP_04579145.1| secretion protein HlyD [Oxalobacter formigenes OXCC13]
 gi|229380027|gb|EEO30118.1| secretion protein HlyD [Oxalobacter formigenes OXCC13]
          Length = 311

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 77/219 (35%), Gaps = 19/219 (8%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNM---LRHINELYDEANLEFANYLKEISR----- 264
           + D+   + +  ++  +++  + +Q+     LR   EL  +  +  A   K++S      
Sbjct: 85  KADIKAAQAVAEQAREDVKSAMSQQELAGVTLRRTQELIKKGFISAAQLDKDVSAMRTAN 144

Query: 265 -DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L   +   A+  +K+  L+      T+ SP+ G I+Y +             +  ++ 
Sbjct: 145 ASLAAAKSRVAEADAKVASLQANLNDLTLKSPVNGRILY-RLAEPGEVLPAGGRVFSMLD 203

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI-----ISQQD 378
            +   Y+   ++     +V+ G  A +      D+        +  + P         + 
Sbjct: 204 LND-VYMYIYLSAADSGNVQLGSDARILLDALPDM---PIPCKVTYVSPKNQFTPKEVET 259

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            + + +  + V LK+     + N    + G P       
Sbjct: 260 KDEREKFMFRVKLKVDPDWLAQNATIAKPGMPGIGWVKT 298


>gi|323525729|ref|YP_004227882.1| efflux pump membrane protein [Burkholderia sp. CCGE1001]
 gi|323382731|gb|ADX54822.1| efflux pump membrane protein [Burkholderia sp. CCGE1001]
          Length = 418

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 86/271 (31%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R ++ +    + + +  +A LS  Q DL     + +  AVSQ
Sbjct: 106 RVALEQAEANLAQTVRQVRGLFADDNQYQAQVAQRQADLSRAQDDLKRRLTVAQTGAVSQ 165

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     N    
Sbjct: 166 EE------------------ISHARDAVKSAQAAVDAAQQQLASNRALTANTTIANHPNV 207

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM IVP     ++ A 
Sbjct: 208 QAAAAKVRDAYLNNARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMAIVPLGG-VWVDAN 265

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 266 FKEVQLKHMRIGQPVELTADVYGSSVVYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 325

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V + +       + + +     A+V   
Sbjct: 326 RLPVRIALDPQELEKHPLRIGLSMQADVSIK 356



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 35/99 (35%), Gaps = 4/99 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +     ++   +  G PL+  +  +    ++  + ++        
Sbjct: 65  VNGNVVQITPQVTGTVVAVNADDTQTVKAGDPLVVLDPADARVALEQAEANL----AQTV 120

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +   L   +N+Y       ++   +  D L +  +   
Sbjct: 121 RQVRGLFADDNQYQAQVAQRQADLSRAQDDLKRRLTVAQ 159


>gi|296186097|ref|ZP_06854502.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|296049365|gb|EFG88794.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
          Length = 411

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 83/258 (32%), Gaps = 42/258 (16%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               I S          ++ S   +    +   +  +  L S +++   MK L+++ A +
Sbjct: 108 IRNSIKSSEAQAAAAQAQLNSSESSANSSQIGINKQQTNLESAERNYDRMKALYDQGAET 167

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + DL   E  +  +  +L+      ++     +                   +++++Q  
Sbjct: 168 KVDLENAETQLKNAQTDLQTARANAESSSLSADAQ---------------RANIQKSQTD 212

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
              +   L       +   I +P++G +      +   Y      + K+     ++ I A
Sbjct: 213 LNTQRESL-------QNTIITAPVSGVVSGKNI-TVGQYISPGTVIGKV---ENISSINA 261

Query: 333 KVTPKQIQ--HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            +  K     +VK G     +              +I+ ID     Q         ++  
Sbjct: 262 VIEVKDSDLSYVKLGTKTKFKLSSEDSKEY---DGVIKNIDGAADPQSRT------FKCK 312

Query: 391 LKITDLAFSDNNIELRNG 408
           ++I      + + +L+ G
Sbjct: 313 IQID-----NKDGKLKPG 325



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 52/154 (33%), Gaps = 2/154 (1%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I +   G + +   ENG  +  G  L+  +D +  + I   +      +  +++ +S+ 
Sbjct: 74  TISNKVGGKVTQVSFENGQSVSAGQALVKLDDTDIRNSIKSSEAQAAAAQAQLNSSESSA 133

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +      +  +   ES E         Y        +  + +    LK   T +++   N
Sbjct: 134 NSSQIGINKQQTNLESAERNYDRMKALYDQGAETKVD--LENAETQLKNAQTDLQTARAN 191

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +   RA +   Q DL   +   +   +
Sbjct: 192 AESSSLSADAQRANIQKSQTDLNTQRESLQNTII 225


>gi|294665877|ref|ZP_06731144.1| transport protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292604332|gb|EFF47716.1| transport protein [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 332

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 91/322 (28%), Gaps = 28/322 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L+         +     K  V +       + LL    + +    +     I++    + 
Sbjct: 9   LQADSVAVAPRVSGYVTKVLVSDNQIVEAGQPLLQIDDRTYQATLQQAEAAIAARQADIV 68

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                + +     L    + +   A L   Q ++     L    A +       +  + +
Sbjct: 69  AATANVSAQESALLQARTQVTAAAASLKFAQAEVKRFAPLAASGADTHEHQESLQHDLAR 128

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  +      + K     I                     LEQ Q       +       
Sbjct: 129 ARAQYDAAQAQAKAGESQIQAS---------------RAQLEQAQAGVKQATADADQARV 173

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             E   + S I G +  +++     +       M IVP   L  + A     Q+  ++ G
Sbjct: 174 AVEDTRLTSRIHGRV-GDKTVQVGQFLGAGTRTMTIVPQQSLYLV-ANFKETQVGLMRPG 231

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLA 397
             A +     + ++       +E + P    Q         T  + +V+    ++I  LA
Sbjct: 232 QPAEIEVDALSGVK---LHGKVESLSPGTGSQFALLPPENATGNFTKVVQRVPVRIRVLA 288

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             +    L  G   EV    ++
Sbjct: 289 GEEARKVLVPGMSVEVTVDTRS 310



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 61/217 (28%), Gaps = 6/217 (2%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE- 113
           + V +    SG + K  V +   +  G PLL  +D      +   + +I   +  I    
Sbjct: 12  DSVAVAPRVSGYVTKVLVSDNQIVEAGQPLLQIDDRTYQATLQQAEAAIAARQADIVAAT 71

Query: 114 ----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                     L  +  V   A   +  Q         +      +    S+   L     
Sbjct: 72  ANVSAQESALLQARTQVTAAAASLKFAQAEVKRFAPLAASGADTHEHQESLQHDLARARA 131

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +  +        E++    RA L   Q  +       ++  V+  D  +    ++    +
Sbjct: 132 QYDAAQAQAKAGESQIQASRAQLEQAQAGVKQATADADQARVAVED-TRLTSRIHGRVGD 190

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
               + +          +  + +L      KE    L
Sbjct: 191 KTVQVGQFLGAGTRTMTIVPQQSLYLVANFKETQVGL 227


>gi|170077216|ref|YP_001733854.1| RND family efflux transporter MFP subunit [Synechococcus sp. PCC
           7002]
 gi|169884885|gb|ACA98598.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7002]
          Length = 445

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 82/230 (35%), Gaps = 14/230 (6%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
              + ++   +   + + + +     DL     S  +A L++ Q ++   +++  + A +
Sbjct: 106 EGQLLTLNADVGDFIRQGQLLAAVEQDLPRTDVSEAQAELAARQFEVKEAESVLAE-AKA 164

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q + N+ E    ++     + + E   +     E+        A  LK     +   Q+ 
Sbjct: 165 QVERNRAELKQAEADARRLQQLAEAGAITAQQAEVAQTQQATAAQVLKASQEQVITRQQA 224

Query: 273 FADEMSKLTILE-------KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
            A    ++T  +       +      I +P +G ++  Q+  + +  Q  Q L++I    
Sbjct: 225 IAATKQRVTAQQAILAQAQERLTYTQITAPQSGILLSKQA-EAGDTIQGGQTLVEIG-DL 282

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
               +  +++ + +    +G    V    +           + +I P+  
Sbjct: 283 SAIKVEIQISDRDLSQFAQGQRVNVALDAFPGETFP---GEVTRISPVAD 329



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 65/182 (35%), Gaps = 19/182 (10%)

Query: 39  PIEISVSSSGEILNED----------NVVEIKSPFSGIIKKFQVENGSQILQGTPLL--- 85
           P+     ++G                  V ++S   G +     + G  I QG  L    
Sbjct: 71  PLVEVAIATGTETAPTASYTGTTMALKQVVVRSRVEGQLLTLNADVGDFIRQGQLLAAVE 130

Query: 86  ----TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
                 +  E    +  ++  +K     +   K+ ++   N+ ++ +   ++R  Q L  
Sbjct: 131 QDLPRTDVSEAQAELAARQFEVKEAESVLAEAKAQVE--RNRAELKQAEADARRLQQLAE 188

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            G   +  ++V     ++  + LK    ++ +        + + +  +A+L+  Q+ LT 
Sbjct: 189 AGAITAQQAEVAQTQQATAAQVLKASQEQVITRQQAIAATKQRVTAQQAILAQAQERLTY 248

Query: 202 MK 203
            +
Sbjct: 249 TQ 250


>gi|315634636|ref|ZP_07889920.1| multidrug resistance protein A [Aggregatibacter segnis ATCC 33393]
 gi|315476584|gb|EFU67332.1| multidrug resistance protein A [Aggregatibacter segnis ATCC 33393]
          Length = 386

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 85/273 (31%), Gaps = 32/273 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +    +    +L   + ++  +      LE      +  L+  Q DL   + L +  A+ 
Sbjct: 93  YQLSFNQAQSTLASAVRQISQLGYTVKQLEATVQANQTALTKAQGDLARRELLGKSGAID 152

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L      V  +   L+   ++       +  +  +   E    +  + +        
Sbjct: 153 KESLQHAREAVMTAEANLKAVKNQLAANKSLLMNVPLKEQPEIQKAISSVKQAWL----- 207

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                          ++  I SP+ G +   +S            LM IV  ++  ++ A
Sbjct: 208 -------------NLQRTKITSPVDGYVAR-RSAQVGQKVAVGSALMAIV-SNEQMWVDA 252

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--------DPIISQQDNNLQTQ 384
                Q++ ++ G    + F  Y      KF   +E I          + +Q       +
Sbjct: 253 NFKETQLKDMRIGQPVKLSFDLYGHDV--KFDGKVEGIEMGTGSAFSLLPAQNATGNWIK 310

Query: 385 EYYEVILKITDLAFSDNNIELRNGFP--AEVLF 415
               V ++I+  A    N  LR G     EV  
Sbjct: 311 VVQRVPVRISLDAQQIANYPLRMGLSTLVEVNI 343



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 56/160 (35%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V I S  +G +++   EN   +  G  LL  +D +     +  + ++ +    I 
Sbjct: 53  VSGNQVMISSQIAGNVRQINAENMDFVHAGDVLLELDDTDYQLSFNQAQSTLASAVRQIS 112

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                +  L       + A    +  L   + LGK  +   +   +   +V  +      
Sbjct: 113 QLGYTVKQLEATVQANQTALTKAQGDLARRELLGKSGAIDKESLQHAREAVMTAEANLKA 172

Query: 170 RMRSIYLNR-----LDLENKSSLLRALLSSHQKDLTMMKN 204
               +  N+     + L+ +  + +A+ S  Q  L + + 
Sbjct: 173 VKNQLAANKSLLMNVPLKEQPEIQKAISSVKQAWLNLQRT 212


>gi|296121371|ref|YP_003629149.1| secretion protein HlyD family protein [Planctomyces limnophilus DSM
           3776]
 gi|296013711|gb|ADG66950.1| secretion protein HlyD family protein [Planctomyces limnophilus DSM
           3776]
          Length = 347

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 56/374 (14%), Positives = 124/374 (33%), Gaps = 84/374 (22%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             GE+      + I +P SGI+ +  V  G  +  G PL T +D   T  ++ +K ++  
Sbjct: 50  GLGEVQMAGEPIAIATPLSGIVTRVHVVTGQSVRAGDPLFTLDDRALTGELNFRKATLAT 109

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +  +                                        K+        + S +
Sbjct: 110 AQAKL---------------------------------------GKLEAGTRPEDFPSSR 130

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
            K+  M +++    D  N++ LL    +  +++    + L+E++A               
Sbjct: 131 AKVEAMTALFKRSEDAWNRAKLLIDKRALSEEEQNARRYLYEQSA--------------- 175

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
                   + + K  L  +     + +LE A             QR      + L +++ 
Sbjct: 176 ------AELSQAKADLAKLEAGTWKHDLEIA-------------QREVEAAAASLAMIQI 216

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHV 342
             ++  I +P+ G +++        +A+     +PL+++        +R ++  +    V
Sbjct: 217 DLDRLVIRAPVDGLVLHADVR-PGEFAEAGNRDKPLIQLG-QHGPLRVRVQIDEEDAIRV 274

Query: 343 KKGYTATVRFPHYADIREKK-FKAIIEKIDP-IISQQDNNLQTQEYYEVILKITDLAFSD 400
           K    A      +   R++   K    +IDP I+ +      T E  +  +        +
Sbjct: 275 KANSKAE----AFVRGRDRTAVKLQFVRIDPRIVPKSSLTGGTTERVDTRVLFVVYEVVE 330

Query: 401 NNIELRNGFPAEVL 414
           N   +  G   +V 
Sbjct: 331 NPTRIYAGQKLDVF 344


>gi|217978344|ref|YP_002362491.1| multidrug resistance protein MdtN [Methylocella silvestris BL2]
 gi|217503720|gb|ACK51129.1| secretion protein HlyD family protein [Methylocella silvestris BL2]
          Length = 350

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 52/346 (15%), Positives = 98/346 (28%), Gaps = 87/346 (25%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSI-----LLPIEISVSSSGEILNEDNVVEIKSPFS 64
           KR H      ++++ I+  +    +++         + +         + +VV +     
Sbjct: 7   KRRHGRIATLISVIIILLGVVAGGYALRQRALFPSTDDATI-------DADVVHVAPAVG 59

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V     + QG PL   + +     +   +  +   R  +              
Sbjct: 60  GRIIDIPVAENMTVAQGDPLFQIDPVPFHLAVSQAEADLDLARAAL-------------- 105

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                          D   +  ST           V R++                    
Sbjct: 106 ---------------DTQRRVLSTERSAVVVATDQVQRAITN------------------ 132

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  L    + +  ++ L  K  V    L+Q +     +   L++   ++    R +
Sbjct: 133 -------LDLATRTVERLRPLAAKGYVPTQQLDQAQTAARDAATSLQQAREQEDAAARAV 185

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                EA  E A   +E                S L I E+  +  T+ +  AG IV   
Sbjct: 186 G---TEAGAEAAVRARE----------------SALAIAERALQDTTVRASQAGRIVGLN 226

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
             SS      SQ L  +V   +   + A      +  +  G  ATV
Sbjct: 227 V-SSGEMVIPSQSLFTLVNSEEWFAV-ANFREFDLAAIAVGDCATV 270


>gi|163857387|ref|YP_001631685.1| hypothetical protein Bpet3075 [Bordetella petrii DSM 12804]
 gi|163261115|emb|CAP43417.1| unnamed protein product [Bordetella petrii]
          Length = 396

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/275 (12%), Positives = 86/275 (31%), Gaps = 25/275 (9%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +     ++   R ++    +  S+  +    +      +A LS  Q DL   + L +   
Sbjct: 93  QQAEAQLAQTVRQVRTLYAQNDSLAADVNVRQADIERAQADLSRAQADLKRRQALAKSGG 152

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VS  +L   +  +  +   L +           +       +        ++ +      
Sbjct: 153 VSGEELLHAQTALKSAQSGLAQAKAALAAAQARLATNQALTDGTTVADHPDVRQA----- 207

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  ++L      R +  + +P+ G I   +S            LM +VP +   ++
Sbjct: 208 ------AARLRDAWLARSRTVLPAPVDGLIAR-RSVQVGQRVAPGATLMNVVPLN-QVWV 259

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNN 380
            A     Q++ +  G +AT+    Y       +   +  +D          P  +   N 
Sbjct: 260 EANFKEGQLRRMHPGQSATLVADMYGSSVT--YHGTVVGLDAGTGSAFALLPAQNATGNW 317

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           ++  +   V +++       + + +      EV  
Sbjct: 318 IKVVQRVPVRIELDPEELKAHPLRVGLSMEVEVDV 352



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 9/167 (5%)

Query: 13  HPASLKRMTL----LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +PA  + + +      ++ I+  I W++       V S+ +     N+V+I     G + 
Sbjct: 8   NPARKRLLLIAAGVFILLAILYAIWWALFG---SRVESTDDAYVHGNLVQITPQVPGTVI 64

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             +  +   +  G PL+  +  +    +   +  +      + T  +  D L    +V +
Sbjct: 65  AIEAGDTEHVRAGQPLVRLDPSDADVALQQAEAQLAQTVRQVRTLYAQNDSLAADVNVRQ 124

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
              E  +  L           +   + G+S     L    T ++S  
Sbjct: 125 ADIERAQADLSRAQADLKRRQALAKSGGVSG--EELLHAQTALKSAQ 169


>gi|90410055|ref|ZP_01218072.1| hypothetical secretion protein [Photobacterium profundum 3TCK]
 gi|90329408|gb|EAS45665.1| hypothetical secretion protein [Photobacterium profundum 3TCK]
          Length = 390

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 88/286 (30%), Gaps = 41/286 (14%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   I    + L      +     +    + K +   A  +  +   T +  + +K  VS
Sbjct: 115 YELAIQEAEQGLVNAGKSVGVQTASIASAQAKLTDAIANQAHLRAQATRILTMEKKGIVS 174

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           ++D ++    +  +  ++       +   + +    +E                      
Sbjct: 175 KSDADKTRASLASAKAQVETAQAGIEQAKKQLGSTGNEN-------------------SE 215

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               + KL   +   ++  I +P  G +   +      YAQ  QPL   V   +  +I A
Sbjct: 216 VKSALLKLQKAQLDLDRTVIRAPAIGGVTNFRLD-EGFYAQAGQPLFTFV-SGEDVWIDA 273

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--------------PIISQQD 378
                 I ++K G +  +          + F   I  ID                ++ Q 
Sbjct: 274 YFRENSIGNMKIGDSVDIVL---DYAPGRVFAGKIAGIDWGISWGENEQAGKLAAVTSQT 330

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             L+  + + V ++  D            G  A+++   + +++  
Sbjct: 331 GWLRQTQRFPVTIRFDDETAR--GFRRVGG-QADIIVYTEQSSVMN 373



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 75/208 (36%), Gaps = 8/208 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +++ P  +KR+T   +   IGL  + I    +  + S+        V+ +    SG + +
Sbjct: 35  EKSPPNKVKRLTTFVLSLCIGLFVFYIAA--DRIIPSTDMARVRGFVIPMTPLVSGRLAE 92

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY-DVLE 128
             VE    +  G  L+  +  +    I   +  + N    +  + +++     K  D + 
Sbjct: 93  VAVEPNEIVNPGDILVKIDSADYELAIQEAEQGLVNAGKSVGVQTASIASAQAKLTDAIA 152

Query: 129 KAFESREEQ----LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                R +      ++  G    + +      ++S    ++     +           N+
Sbjct: 153 NQAHLRAQATRILTMEKKGIVSKSDADKTRASLASAKAQVETAQAGIEQAKKQLGSTGNE 212

Query: 185 SSLLR-ALLSSHQKDLTMMKNLFEKNAV 211
           +S ++ ALL   +  L + + +    A+
Sbjct: 213 NSEVKSALLKLQKAQLDLDRTVIRAPAI 240


>gi|83816247|ref|YP_446089.1| acriflavin resistance protein AcrE, putative [Salinibacter ruber
           DSM 13855]
 gi|83757641|gb|ABC45754.1| acriflavin resistance protein AcrE, putative [Salinibacter ruber
           DSM 13855]
          Length = 373

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 67/211 (31%), Gaps = 9/211 (4%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           ++   + +R   ++ L       +             E +              E+ Q  
Sbjct: 104 RSQNVEAQREQVQARLREARAARDNAETQFERIRALREKDSATEQEFDNAQTAYERAQAQ 163

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                S+L   E      T+ +PI G +V  QS      A   +PL+  V          
Sbjct: 164 VEALESRLAETEDMLTYATLEAPIDGYVVEKQS-EQGALAAPGRPLLT-VETLDDLKAVV 221

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +V  + +     G + TV     A++ +   + ++ +++P  +        Q    V L 
Sbjct: 222 QVPAEDVNQFAVGDSTTVTIGAAANVHK---QGVVTQVNPSGNAVSRQFTVQ----VRLP 274

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            T     +    L++G  AEV       +  
Sbjct: 275 RTAPDDREAATALKSGMYAEVRHQTGTHSTL 305



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 54/150 (36%), Gaps = 7/150 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  VE G ++ +G  L+       +  ++ ++  ++         +   +    + 
Sbjct: 81  GTITRLSVEEGDRVQKGETLVRI----RSQNVEAQREQVQARLREARAARDNAETQFERI 136

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L +   + E++  +    Y    ++V    + S     +  LT   ++         +
Sbjct: 137 RALREKDSATEQEFDNAQTAYERAQAQV--EALESRLAETEDMLT-YATLEAPIDGYVVE 193

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +  L++  + L  ++ L +  AV Q 
Sbjct: 194 KQSEQGALAAPGRPLLTVETLDDLKAVVQV 223


>gi|290969069|ref|ZP_06560604.1| efflux transporter, RND family, MFP subunit [Megasphaera genomosp.
           type_1 str. 28L]
 gi|290781025|gb|EFD93618.1| efflux transporter, RND family, MFP subunit [Megasphaera genomosp.
           type_1 str. 28L]
          Length = 366

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 69/207 (33%), Gaps = 31/207 (14%)

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            + R  + + +  + +   +Y+ A   +          +E  +  +   +S L+      
Sbjct: 99  ADYRAKLVQAQIKVGNTRAVYERAATLYRAGAGS-QAAMEDARADYEAAVSALSEARAEM 157

Query: 288 EQKTILSPIAGTIVY-------NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +  I + + G +V          S  +         LM++    +   + AKV    I 
Sbjct: 158 NETVIRASMNGVVVGAPKSVGTMASQGNGG----GTVLMRLADTGQKQIV-AKVDETDIG 212

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPI----------ISQQDNNLQTQEYYEVI 390
            +K G TA+     Y     KKF A + KI                +  N  +  YYEV 
Sbjct: 213 KIKAGQTASFTVDAYG---GKKFTARVVKISQTDTNNSWDPDNTGDRTGNAPSVIYYEVT 269

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTA 417
           L + D         LR G  A V  T 
Sbjct: 270 LAVQDPENL-----LRLGMTARVAITT 291



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 39/121 (32%), Gaps = 1/121 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   V+++G +   + V  +    +  +K+  V+    +  G  +   +D +    +   
Sbjct: 50  ITSQVTATGTVSPVEAVEVV-PKITARVKQVCVKENDTVKAGQVIAILDDADYRAKLVQA 108

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++ + N R   +   +           +E A    E  +             V    ++ 
Sbjct: 109 QIKVGNTRAVYERAATLYRAGAGSQAAMEDARADYEAAVSALSEARAEMNETVIRASMNG 168

Query: 160 V 160
           V
Sbjct: 169 V 169


>gi|261212261|ref|ZP_05926547.1| membrane-fusion protein [Vibrio sp. RC341]
 gi|260838869|gb|EEX65520.1| membrane-fusion protein [Vibrio sp. RC341]
          Length = 366

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 69/210 (32%), Gaps = 24/210 (11%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            + +  AVS++ +            +L   +   K  L  + +    A     N   +  
Sbjct: 97  KIVKGQAVSKDQVIAL-----IDRGDLDAQLERAKAQL-KVRQQEFNAASALKNKGLQGE 150

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
                      D  S L+ +++  E   + +P  G +         ++     P+  I+ 
Sbjct: 151 VAFTNAAAALTDAQSSLSTVQRLLENTQVRAPFEGVVETLPI-EKGDFVSIGDPVASII- 208

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 I A V+ + IQHV+ G  A +RF     +   + +  +  I  + S   N    
Sbjct: 209 DLHRLVIEADVSERHIQHVQLGQPAVIRF-----MDGSQTQGKVRYISRLSSPATNTFAI 263

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                      ++A  +    +  G  AEV
Sbjct: 264 -----------EVAMDNPQQTIPAGVSAEV 282



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 4/116 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I   ++  G  + +   +   +  +    ++  K  +K  +     E +A   L NK 
Sbjct: 91  GRIIDIKIVKGQAVSKDQVIALIDRGDLDAQLERAKAQLKVRQ----QEFNAASALKNKG 146

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
              E AF +    L D      +    + N  + + +  +   L   +  +++  D
Sbjct: 147 LQGEVAFTNAAAALTDAQSSLSTVQRLLENTQVRAPFEGVVETLPIEKGDFVSIGD 202


>gi|77165255|ref|YP_343780.1| secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
 gi|76883569|gb|ABA58250.1| Secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
          Length = 339

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 98/287 (34%), Gaps = 12/287 (4%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +  G+      +  +  +     ++  +   +  +   R  LE + +++   L +  + 
Sbjct: 53  FNVPGRIKRMLVEEGDKTVPGQRLAVLEQDRFIDRVAAARAQLEKQQAVVEE-LETGSRP 111

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
             + K   EK A      N Q     + TL   E + E+             ANLE A  
Sbjct: 112 EEIKKAWAEKEAAEIAFSNAQRIYSRRLTLVHTEAVSEETADDAREVRDRAAANLEAARQ 171

Query: 259 LKEI------SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           + ++        D++  Q       + L + ++  +   I +P AGTI   +        
Sbjct: 172 VWQLAVKGPRQEDIQAAQAEARALAAALALAQEDLKDTEIQAPAAGTI-RVRIQEPGAIV 230

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              +P+  +       ++RA V+   +  +  G    +    Y +     F+  I  I P
Sbjct: 231 TLGEPVYSLA-LKNPVWVRAYVSEPNLGRIYPGMPVEIFTDSYPEY---PFQGQIGFISP 286

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   +QT      ++    +  ++ +  LR G P  ++   K 
Sbjct: 287 TAEFTPKTVQTPAVRTSLVYRFRVIIANPDERLRQGMPVTLIIHLKK 333



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 44/124 (35%), Gaps = 5/124 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK+  VE G + + G  L   E     D +   +  ++  +  ++  ++      ++ 
Sbjct: 57  GRIKRMLVEEGDKTVPGQRLAVLEQDRFIDRVAAARAQLEKQQAVVEELETG-----SRP 111

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           + ++KA+  +E   + F         ++      +V          +R      L+   +
Sbjct: 112 EEIKKAWAEKEAAEIAFSNAQRIYSRRLTLVHTEAVSEETADDAREVRDRAAANLEAARQ 171

Query: 185 SSLL 188
              L
Sbjct: 172 VWQL 175


>gi|218960432|ref|YP_001740207.1| putative efflux transporter, RND family, MFP subunit [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729089|emb|CAO80000.1| putative efflux transporter, RND family, MFP subunit [Candidatus
           Cloacamonas acidaminovorans]
          Length = 431

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 63/210 (30%), Gaps = 16/210 (7%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++        K+ L   +   +Q  +   +     E  +      K+     +  Q+ F
Sbjct: 91  TEILATNLEAAKADLAKAKTALDQAKLDYDLQAELLEKKMTPEYDAKKALFAYQTAQQNF 150

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYI 330
            +    L   +K      I SPI G +V  +          S     L KI  +     I
Sbjct: 151 NNAQLTLQRAQKNLANAYITSPINGIVVS-RDVDEGQTVAASMSSPTLFKIANNLDQMQI 209

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A V    I  +K G         Y       F   +++I    + + N +     Y VI
Sbjct: 210 SANVDEADIGKIKVGLPVEFSVDAYPSEN---FSGNVKQIRLNPTTESNVVS----YSVI 262

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +       ++   +L  G    V    +  
Sbjct: 263 ID-----AANPEQKLLPGMTTNVTIIIQAR 287


>gi|307822569|ref|ZP_07652800.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
 gi|307736173|gb|EFO07019.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
          Length = 319

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 59/162 (36%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++ +G +  +   + I +P SGI+K   V+ G ++  G PL   +D +T   + +K+  +
Sbjct: 47  IAGAGIVEAKSQNIAIGTPLSGIVKTLAVKVGDKVKAGAPLFYLDDRDTRAELAVKRADL 106

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  I+   ++L    +  D+ E   + R     + L + ++          +     
Sbjct: 107 AKAQAGINEANASLKDTQSLSDLAEAVTDRRAISSEELLRRRNALQINAAKLDSAKALMQ 166

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                       L RL ++         ++    +      L
Sbjct: 167 QAEAALATTQTTLARLVVQAPVDGEVLQVNIRPGEFAQAGAL 208



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 42/108 (38%), Gaps = 3/108 (2%)

Query: 210 AVSQNDLNQQERIVYKSTLELR--ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           AV + DL + +  + ++   L+  +++ +    +     +  E  L   N L+  +  L+
Sbjct: 100 AVKRADLAKAQAGINEANASLKDTQSLSDLAEAVTDRRAISSEELLRRRNALQINAAKLD 159

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             +       + L   + T  +  + +P+ G ++         +AQ  
Sbjct: 160 SAKALMQQAEAALATTQTTLARLVVQAPVDGEVLQVNIR-PGEFAQAG 206


>gi|212693155|ref|ZP_03301283.1| hypothetical protein BACDOR_02662 [Bacteroides dorei DSM 17855]
 gi|237725433|ref|ZP_04555914.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265753549|ref|ZP_06088904.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212664260|gb|EEB24832.1| hypothetical protein BACDOR_02662 [Bacteroides dorei DSM 17855]
 gi|229436120|gb|EEO46197.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|263235263|gb|EEZ20787.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 298

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 97/273 (35%), Gaps = 29/273 (10%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q     G+      +V       +Y      L   ++I     D+  + +  +  +   +
Sbjct: 49  QFNIEEGQLLKADEEVGCIDTLQLYLKKMQLLASGKAIASKSTDINKQIAATKEQIGKAE 108

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +    +NL ++NA +Q  ++  +  +     +L   I   +     I E      ++ A
Sbjct: 109 YERKRTENLLKENAATQKQIDDIDSQIAVLKKQLEAQISTLQRGNASITEESSAYEIQVA 168

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                     L+    +  I SPI GT++  +   +   A Q +
Sbjct: 169 Q-------------------------LDDQLRKCHITSPICGTVLA-KYAEAGELATQGK 202

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           PL K V   +  ++RA +T  Q+  +K G    V F    +   ++++  I  I      
Sbjct: 203 PLFK-VADVQHLFLRAYITADQLSQLKLGDKVKV-FSDLGEDDRREYEGTITWISDKSEF 260

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
               +QT++    ++  T +A  ++   ++ G 
Sbjct: 261 TPKTIQTRDERANLVYATKIAVKNDGY-IKIGM 292


>gi|317049020|ref|YP_004116668.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
 gi|316950637|gb|ADU70112.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
          Length = 342

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 94/306 (30%), Gaps = 14/306 (4%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++   ++N  Y ++          +     +       +          +L+     ++ 
Sbjct: 36  RTDDAYVNADYTLVAPKVSGYIASVNVQDNQRVKAGELLATLDDRDYRVALETAKANLQV 95

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               RL  + +    ++ +   +  L   +   +    S    +   +    +  E ++ 
Sbjct: 96  SEAKRLSSQAQLEQQQSTIDQAKATLAASQASAQYAGQSAARYDSLYKSGTIAADEQQKA 155

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              Q++    + +    A       +  +   L Q +       + +   +       I+
Sbjct: 156 TSTQRSAAATVRQSEA-ALAAAVKEVGVLQAALRQAEADVTAAQASVDQAQLNLSYTRIV 214

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P+ G +   +S     Y      L+ +VP  +       +  +    V++G    VR  
Sbjct: 215 APVDGMV-GQRSVRLGAYVTAGTRLLAVVPLQQTYITANYLETQLTD-VREGQKVLVRVD 272

Query: 354 HYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNN----IEL 405
                  K F   ++ I P      S    +  T  Y +V+ ++      D N     +L
Sbjct: 273 ALP---GKTFSGHVDSIAPATGATFSAISPDNATGNYTKVVQRLPVKIVLDANQADLAQL 329

Query: 406 RNGFPA 411
           R G  A
Sbjct: 330 RVGMSA 335


>gi|207744295|ref|YP_002260687.1| multidrug resistance transport (partial sequence c terminus)
           protein [Ralstonia solanacearum IPO1609]
 gi|206595700|emb|CAQ62627.1| putative multidrug resistance transport (partial sequence c
           terminus) protein [Ralstonia solanacearum IPO1609]
          Length = 235

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 67/234 (28%), Gaps = 30/234 (12%)

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           SS  +      +L    A +++ L+  +    ++                 I  L     
Sbjct: 3   SSPPRQTQRYASLVASGAETRDRLSTLQNQAAQARANAAAQRAALTKATLEIAAL----- 57

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                        L Q +       ++  + E       + +   G +  +Q      + 
Sbjct: 58  ----------QAQLRQAEAQAKTARAQAAVAEVNLAATELRASTDGRVGDSQVR-IGQFV 106

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                LM +VP     YI A     Q+ H++ G    V    + D      +  +E + P
Sbjct: 107 SAGTRLMSVVPAH--LYITANFKETQLSHMRIGQPVHVHVDAFPDE---AIEGHVESLSP 161

Query: 373 IISQQ----DNNLQTQEYYEVILKIT-DLAFSDNNIELRN----GFPAEVLFTA 417
               Q         T  + +++ ++   +A    +  ++     G    V    
Sbjct: 162 GTGAQFSLLPPQNATGNFIKIVQRVPVRIALDVTDDRIKPLLAAGMSVTVDVDT 215


>gi|42520225|ref|NP_966140.1| RND family efflux transporter MFP subunit [Wolbachia endosymbiont
           of Drosophila melanogaster]
 gi|42409963|gb|AAS14074.1| efflux transporter, RND family, MFP subunit [Wolbachia endosymbiont
           of Drosophila melanogaster]
          Length = 360

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 72/213 (33%), Gaps = 20/213 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--EFANYLKEISRDLE 267
           A+   D  + +R      +E  + I + +     + +   E +   +           +E
Sbjct: 95  AIYLPDGEKVKRDDVVLKIEDYDRIEQAQKAKALLKQREIEYDSSHKLNKKGYGAQIQVE 154

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
                     + L  LE   E   + SPI G I    +    ++    Q +  +V   ++
Sbjct: 155 AAFTALQSAKADLKRLELDLENTAVTSPIDGYIDKINAN-EGDFVNAGQKIADVVNFDQI 213

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +   V+  ++  ++ G TA +       +  K+    +  I  I   +  +      Y
Sbjct: 214 LVV-LYVSENEVNKIELGSTAQINL-----LDGKELAGEVSFISKIAEPKTGS------Y 261

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            V +K+T+       I L+ G  A V   +   
Sbjct: 262 RVEVKVTNNKM----ISLQ-GLTANVRLPSGER 289



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 71/253 (28%), Gaps = 45/253 (17%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSS-------------------------SGEILNED 54
           + + SI  I+     S  L  + +V S                         SG +    
Sbjct: 22  IIISSIAFILLFFISSAFLKKDQAVHSDNATSSFSVKTQECAPQNRTIYLNFSGTVNPLH 81

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
               +      II    + +G ++ +   +L  ED +  +     K  +K      + E 
Sbjct: 82  RASLVSKISGKIIA-IYLPDGEKVKRDDVVLKIEDYDRIEQAQKAKALLKQR----EIEY 136

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
            +   LN K    +   E+    L             + N  ++S       K+      
Sbjct: 137 DSSHKLNKKGYGAQIQVEAAFTALQSAKADLKRLELDLENTAVTSPIDGYIDKINANEGD 196

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN- 233
           ++N             +L                  VS+N++N+ E         L    
Sbjct: 197 FVNAGQKIADVVNFDQILVVL--------------YVSENEVNKIELGSTAQINLLDGKE 242

Query: 234 IHEQKNMLRHINE 246
           +  + + +  I E
Sbjct: 243 LAGEVSFISKIAE 255


>gi|325293217|ref|YP_004279081.1| HlyD family secretion protein [Agrobacterium sp. H13-3]
 gi|325061070|gb|ADY64761.1| HlyD family secretion protein [Agrobacterium sp. H13-3]
          Length = 432

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 16/212 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD-EANLEFANYLKEI-SRDLEQN 269
           ++  L   +  V K+  +L       + +   +      + +L+ A +  +  S  L+ N
Sbjct: 133 ARAKLASAKANVLKARADLGSAKTSMERLRSLVQSRVSSQQDLDAAQFNHDAASATLQVN 192

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKL 327
           + T     + L + E    +  I+SPI G I+       +  A    +  L  I    + 
Sbjct: 193 EATVLSAEADLRLAEVNLGKAKIVSPIDGVILTRSVDPGATVASSLNAPVLFTIAGDLRH 252

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++  V    +  V+ G  AT     Y D         +      +S           Y
Sbjct: 253 MELQVSVDEADVGKVETGQKATFNVDAYPDRSFPAEIETVRFASETVSNVVT-------Y 305

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + IL + +         LR G  A      + 
Sbjct: 306 KGILTVDNEELL-----LRPGMTATANIVVEE 332



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 51/142 (35%), Gaps = 1/142 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + V+S+G +   D V +I S  SG I+K  V   S +  G  L   +  +    +   
Sbjct: 75  LSVIVTSTGSVQPTDQV-DISSELSGTIRKVNVTYNSPVKSGDILAELDTNKLEADVQSA 133

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  + + + ++   ++ L       + L    +SR     D      +  +      ++ 
Sbjct: 134 RAKLASAKANVLKARADLGSAKTSMERLRSLVQSRVSSQQDLDAAQFNHDAASATLQVNE 193

Query: 160 VYRSLKMKLTRMRSIYLNRLDL 181
                     R+  + L +  +
Sbjct: 194 ATVLSAEADLRLAEVNLGKAKI 215


>gi|254374671|ref|ZP_04990152.1| HlyD family secretion protein [Francisella novicida GA99-3548]
 gi|151572390|gb|EDN38044.1| HlyD family secretion protein [Francisella novicida GA99-3548]
          Length = 341

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 78/251 (31%), Gaps = 11/251 (4%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL- 230
           +   L      +K    +  L+  Q+ +    N+ + N             +    ++L 
Sbjct: 96  KDYQLKVAQANSKVIQAKGQLAIAQEQV----NVAKSNLTKAQSSLDTATSMADRYIKLY 151

Query: 231 RENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +++    ++  ++IN+       +   Y  LK+    +E  +                  
Sbjct: 152 KDDAGSLQDAQKYINQKIQAQKAKDEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLG 211

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             T+++P  G +   + +         Q L   +  +K  +I A      +  +K G   
Sbjct: 212 YTTLIAPDDGYVSNLKLY-KGQLVSPGQALFGFI-DNKKWWIDANFKETDLDRIKPGQKV 269

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIELR 406
            +    Y+     K  +I      + S       T  + +V     +  +  +D    LR
Sbjct: 270 EIELDMYSHSYTGKVDSISYATGSVFSLLPPENATGNWVKVTQRFPVKIILKNDPKYPLR 329

Query: 407 NGFPAEVLFTA 417
            G  A V    
Sbjct: 330 VGASATVKVDT 340



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 57/185 (30%), Gaps = 10/185 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
              +++ I     G I+K  + N   + +G  L+  E         +    +   K  + 
Sbjct: 58  VNADIISISPKVGGYIEKVYIHNNQFVHKGDKLVQIEPKDYQLKVAQANSKVIQAKGQLA 117

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +  ++  KS L    +  D    +   R  +L            K  N  I +  ++ 
Sbjct: 118 IAQEQVNVAKSNLTKAQSSLDT-ATSMADRYIKLYKDDAGSLQDAQKYINQKIQA-QKAK 175

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIV 223
               + ++   L     + +    +    +   +L     +  +   VS   L + + + 
Sbjct: 176 DEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLGYTTLIAPDDGYVSNLKLYKGQLVS 235

Query: 224 YKSTL 228
               L
Sbjct: 236 PGQAL 240


>gi|78214009|ref|YP_382788.1| hypothetical protein Syncc9605_2502 [Synechococcus sp. CC9605]
 gi|78198468|gb|ABB36233.1| conserved hypothetical protein [Synechococcus sp. CC9605]
          Length = 373

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 83/312 (26%), Gaps = 62/312 (19%)

Query: 149 CSKVFNYGISSVYRSLKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                   +  V + +  +    +    +N+   E++   +R  +   + D+  +K+L E
Sbjct: 91  QRGQLMARVDPVNQEVTKQEAERQLEQLINQDQHEDQLGAIR--IRQQESDIARIKHLAE 148

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             A+S + L+++++ +      L     +++  +       +  N E A   +       
Sbjct: 149 LGAMSIDKLSERQKELSSLVDSLEARNGQREQQILQQRAKVEARNEEIARIAQ------- 201

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHS 325
                                   I +PI G ++           QQ   +  I   P  
Sbjct: 202 ------------------------IRAPIDGCVIDRNVH-RGEVLQQGTTVFTIEANPGQ 236

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQDNNLQT 383
                 A       + +  G    +        R    +  +  I   P+          
Sbjct: 237 APLESLAFFPAGDGKRLSVGQRVRISPTSTKQQRHGGIEGKVLSIRRLPVSDNALTKRLG 296

Query: 384 QEYYEVILKITDLAF-----------------------SDNNIELRNGFPAEVLFTAKNT 420
            E     ++I                                ++L  G P EV    +  
Sbjct: 297 LESLLDAIRIDPKGPLIEVQTSLQRDPATISGYDWGGGPGPAMQLTTGTPTEVRVLVEER 356

Query: 421 TLAQEIIHPITD 432
                +I  + D
Sbjct: 357 RPISYVIPILRD 368



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 71/194 (36%), Gaps = 8/194 (4%)

Query: 17  LKRMTLLSIIGIIGL----ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           L+    L ++ + G       WSI   + + +S  G ++  ++++ ++S  +G I +   
Sbjct: 25  LRPGQWLLLLSLGGFCLTIAIWSIFGRLPVRISGKGVLIRTNSLMVVQSELAGRILELNQ 84

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  + +G  +   + +         +  ++ L    D  +  L  +  +    + A  
Sbjct: 85  AIGDCVQRGQLMARVDPVNQEVTKQEAERQLEQLINQ-DQHEDQLGAIRIRQQESDIARI 143

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYR---SLKMKLTRMRSIYLNRLDLENKSSLLR 189
               +L        S   K  +  + S+       + ++ + R+    R +   + + +R
Sbjct: 144 KHLAELGAMSIDKLSERQKELSSLVDSLEARNGQREQQILQQRAKVEARNEEIARIAQIR 203

Query: 190 ALLSSHQKDLTMMK 203
           A +     D  + +
Sbjct: 204 APIDGCVIDRNVHR 217


>gi|89073893|ref|ZP_01160400.1| membrane-fusion protein [Photobacterium sp. SKA34]
 gi|89050428|gb|EAR55929.1| membrane-fusion protein [Photobacterium sp. SKA34]
          Length = 376

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 75/208 (36%), Gaps = 21/208 (10%)

Query: 207 EKNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEI--- 262
               +S+      +R+     L  +  N+               EA  +    L      
Sbjct: 84  ASGVISKIAFESGQRVKAGQELVSINSNVEVSSLQSTKAQLPAVEATYKRYQDLFRKGSV 143

Query: 263 -SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               L++ +  +   +S++  LE++ +++ I++P  G +   ++     Y Q    ++++
Sbjct: 144 SKSSLDEAKANYFALVSQIKSLEESIQRRDIVAPFDGEV-GLRNVYLGQYIQPGTQIVRL 202

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
              ++    R  V    I  +K G T  +    Y D     FK  I  I+P ++ Q   +
Sbjct: 203 -EDTRTMRFRFTVPQTDISKIKIGQTVDINVDAYQDT---DFKGQITAIEPAVNAQTGLI 258

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGF 409
           Q Q               ++  +LR+G 
Sbjct: 259 QVQ-----------ADIPNSGGKLRSGM 275



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 90/305 (29%), Gaps = 26/305 (8%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           ++ + G I     V  + S  SG+I K   E+G ++  G  L++         +   K  
Sbjct: 65  AIQAIGFIEPVQGV-TLTSEASGVISKIAFESGQRVKAGQELVSINSNVEVSSLQSTKAQ 123

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +  +       +      +     L++A  +    +        S   +           
Sbjct: 124 LPAVEATYKRYQDLFRKGSVSKSSLDEAKANYFALVSQIKSLEESIQRRDIVAPFDGEVG 183

Query: 163 SLKMKLTRMRSIYLNRLDLENKS-------------------SLLRALLSSHQK-DLTMM 202
              + L +        + LE+                       +   + ++Q  D    
Sbjct: 184 LRNVYLGQYIQPGTQIVRLEDTRTMRFRFTVPQTDISKIKIGQTVDINVDAYQDTDFKGQ 243

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFA-NYLK 260
               E    +Q  L Q +  +  S  +LR  +    + +L  I++               
Sbjct: 244 ITAIEPAVNAQTGLIQVQADIPNSGGKLRSGMFARARVILPTISDQIIVPQTAITYTLYG 303

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           +    L++         + +T  +    +  ILS   G     Q  ++      ++ L+ 
Sbjct: 304 DTIYVLKEVDGKLRAIQTVVTTGQNHGNKVRILS---GIKAGEQIVTTGQIRLSNKTLVH 360

Query: 321 IVPHS 325
           +V + 
Sbjct: 361 VVEND 365


>gi|218506179|ref|ZP_03504057.1| putative toxin secretion transmembrane protein [Rhizobium etli
           Brasil 5]
          Length = 55

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 1/52 (1%)

Query: 389 VILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           V  KI+D  +     +    G P E        T    +  P+ D   + F+
Sbjct: 2   VRTKISDGEWQRLGQVTPVPGMPVEAFIQTGERTALAYLTKPLMDQVARAFK 53


>gi|163786513|ref|ZP_02180961.1| membrane fusion efflux protein, putative [Flavobacteriales
           bacterium ALC-1]
 gi|159878373|gb|EDP72429.1| membrane fusion efflux protein, putative [Flavobacteriales
           bacterium ALC-1]
          Length = 437

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 85/269 (31%), Gaps = 57/269 (21%)

Query: 164 LKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           ++  ++R ++ Y N R  LE   + L+      + D    K LF+K  +S+ D ++    
Sbjct: 98  IQSAVSRSQASYQNVRAGLEQAEANLKQ----AKADYDRSKALFDKGVISKADWDRAIAS 153

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +        +  ++    +NE                                    
Sbjct: 154 YETAEAGKSSAYYSVQSAAATVNE------------------------------------ 177

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQ 338
            +    + TI +P++GTI                     +++ V +     +   V    
Sbjct: 178 AKDNLNRTTIYAPMSGTISLLSVELGERVVGTQQMAGTEILR-VANLNNMEVEVDVNEND 236

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  V  G +  V    Y    +K+FK I+ +I    +      Q   + +V ++I + ++
Sbjct: 237 IVKVGIGDSTIVEVDAY---LKKEFKGIVTEIANSAAGNLAADQVTNF-KVKVRILEESY 292

Query: 399 SDNNI-------ELRNGFPAEVLFTAKNT 420
            D            R G  A V    K  
Sbjct: 293 KDLTEGKPETYSPFRPGMTATVDIITKTR 321



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 70/196 (35%), Gaps = 2/196 (1%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            L  I  +VS++G+I  E  V  I S  SG I +   + G ++ +G  L+          
Sbjct: 43  ALQDIVETVSATGKIQPEVEVK-ISSEVSGEILELPFKEGQEVKKGDLLVRVNPDLIQSA 101

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   + S +N+R  ++  ++ L      YD  +  F+       D+     S  +     
Sbjct: 102 VSRSQASYQNVRAGLEQAEANLKQAKADYDRSKALFDKGVISKADWDRAIASYETAEAGK 161

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS-SHQKDLTMMKNLFEKNAVSQN 214
             +                 LNR  +    S   +LLS    + +   + +     +   
Sbjct: 162 SSAYYSVQSAAATVNEAKDNLNRTTIYAPMSGTISLLSVELGERVVGTQQMAGTEILRVA 221

Query: 215 DLNQQERIVYKSTLEL 230
           +LN  E  V  +  ++
Sbjct: 222 NLNNMEVEVDVNENDI 237


>gi|251777711|ref|ZP_04820631.1| efflux transporter, RND family, MFP subunit [Clostridium botulinum
           E1 str. 'BoNT E Beluga']
 gi|243082026|gb|EES47916.1| efflux transporter, RND family, MFP subunit [Clostridium botulinum
           E1 str. 'BoNT E Beluga']
          Length = 409

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/356 (13%), Positives = 103/356 (28%), Gaps = 92/356 (25%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I+K     G ++ +G  LLT +  +  + +          +     E +  ++ N  
Sbjct: 68  GGTIEKTYASLGQEVKKGDILLTLKGDDVNNSLS---------QAKAALELAQANYNNTT 118

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              +E                                                    LEN
Sbjct: 119 SGTIES-----------------------------------------------QTNQLEN 131

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
              L +      +++  M   L++ +A+S++   + E  + ++  +L  +I +       
Sbjct: 132 SVKLAQLQYDEAKRNYDMYSALYQADAISEDQYKKIELSLNQAKQQL--DIAQ------- 182

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                           +   + LEQ + +         +      + T++SP+ G I   
Sbjct: 183 -KSYTTTTEKNIPELQELAEKQLEQAKVS-------YDVATSNLNKLTLVSPVDGVITAK 234

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              S +    Q QP   I        +   V    I     G    V       +  +  
Sbjct: 235 NCDS-NEMISQQQPAFVIS-SPNTLEVNINVAQADINKFSAGQDVEV------AVDGQTI 286

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              +E +  ++  Q         Y++ + I      +++  L+ G   EV  + + 
Sbjct: 287 NGKVEYVPLVVDSQT------SLYQIKILID-----NSSNTLKAGMSVEVNLSLEK 331


>gi|254507890|ref|ZP_05120019.1| secretion protein HlyD family protein [Vibrio parahaemolyticus 16]
 gi|219549126|gb|EED26122.1| secretion protein HlyD family protein [Vibrio parahaemolyticus 16]
          Length = 314

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 98/310 (31%), Gaps = 41/310 (13%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           + +  + Q+++          + +   ++S   +L +    + +        + K     
Sbjct: 18  SVDVNDNQVVEQGELLFRIDPRNYEIALASAQANLAIAGQNIGASTAAVEVAQAKVVDAL 77

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A   + ++     K L ++  +SQ+DL+       ++   L           +++     
Sbjct: 78  AARDNAREQANRTKQLADRGVLSQSDLDNANEAKERAQASLDAAQASLVQAKQNLGPT-- 135

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                             +N       M+ L   E    +  +++P  G +   Q  ++ 
Sbjct: 136 -----------------GENNPQILAAMASLEKAELDLRKTEVVAPSRGVVTNMQL-TTG 177

Query: 310 NYAQQSQPLMK-IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +     P++  I P +      A V    ++++K G    +                +E
Sbjct: 178 QHVSSGAPVLTFIDPRNVWL--SALVRENSMEYIKPGQRVKIVLDALPGR---VLSGKVE 232

Query: 369 KI------DPIISQQDN------NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            I         I  +           T + Y V ++  +L+   N   +R G  A V F 
Sbjct: 233 SIGWGTGGSNSIDPETGFLNASQGNTTPQRYPVNIEFDNLSELSN---IRYGSQATVAFY 289

Query: 417 AKNTTLAQEI 426
            + ++  + +
Sbjct: 290 TEQSSFGEFL 299



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 11/158 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I    V +   + QG  L   +       +   + ++     +I    +A++    K
Sbjct: 13  SGNIVSVDVNDNQVVEQGELLFRIDPRNYEIALASAQANLAIAGQNIGASTAAVEVAQAK 72

Query: 124 -YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             D L     +RE+             S+      S +  + + K     S+   +  L 
Sbjct: 73  VVDALAARDNAREQANRTKQLADRGVLSQ------SDLDNANEAKERAQASLDAAQASLV 126

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                L     ++ + L  M +L +    ++ DL + E
Sbjct: 127 QAKQNLGPTGENNPQILAAMASLEK----AELDLRKTE 160


>gi|172035786|ref|YP_001802287.1| hypothetical protein cce_0870 [Cyanothece sp. ATCC 51142]
 gi|171697240|gb|ACB50221.1| hypothetical protein cce_0870 [Cyanothece sp. ATCC 51142]
          Length = 421

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/300 (11%), Positives = 88/300 (29%), Gaps = 38/300 (12%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL-------- 142
           E T  ++    S+       D+ + A++++     V   A  S+ E  L  L        
Sbjct: 35  EETANLEETLPSVDVTIARTDSIRDAIEYIGTTQPVQTVALRSQVEGQLLRLTVDVGDPV 94

Query: 143 ---GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                       +    +      L    + +           +  +  +  L   + D 
Sbjct: 95  TQGQLLAQLDDSLLQAEVGRAEAELAALNSEVIRAQGEVKSAISAVASAKVQLEQAKTDA 154

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             ++ L+E+ A++  ++         +   L     E       +         + +   
Sbjct: 155 DRLEQLYEQGAIALQEVELARTEYRTAQQALSSAQSEVNVRQSAVEAAKGRVIAQQSLIQ 214

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +E                      ++      + SPI G ++  +   + N  Q    ++
Sbjct: 215 QE----------------------QERLSYTRLQSPITGYVLQ-RVIETGNLVQPGSEIL 251

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           ++   S++  +   V+   + +++ G +  VR   ++      F   +  I P       
Sbjct: 252 RLGDFSQVKVV-VPVSELDLANIRVGQSVRVRLDAFSRDT---FVGRVSNISPAADPTSR 307



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/144 (11%), Positives = 48/144 (33%), Gaps = 5/144 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDF 119
           G + +  V+ G  + QG  L   +D      +   +  +  L     R   + + +    
Sbjct: 81  GQLLRLTVDVGDPVTQGQLLAQLDDSLLQAEVGRAEAELAALNSEVIRAQGEVKSAISAV 140

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            + K  + +   ++   + L   G       ++      +  ++L    + +        
Sbjct: 141 ASAKVQLEQAKTDADRLEQLYEQGAIALQEVELARTEYRTAQQALSSAQSEVNVRQSAVE 200

Query: 180 DLENKSSLLRALLSSHQKDLTMMK 203
             + +    ++L+   Q+ L+  +
Sbjct: 201 AAKGRVIAQQSLIQQEQERLSYTR 224


>gi|167035567|ref|YP_001670798.1| secretion protein HlyD family protein [Pseudomonas putida GB-1]
 gi|166862055|gb|ABZ00463.1| secretion protein HlyD family protein [Pseudomonas putida GB-1]
          Length = 353

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 84/254 (33%), Gaps = 17/254 (6%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           + +    +  + L    +   +    +K    + A + +++N+  R+  +    ++ N  
Sbjct: 94  VAQAQSADARATLERQAALIAQAEAAVKAAQAEAAFADHEVNRYSRLAEQGAGTVQ-NAQ 152

Query: 236 EQKNMLRHINELYDEANLEFANYLKEI---SRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           + ++ +         A        K++   +  +           + L   +       I
Sbjct: 153 QARSGVDQARARLANAQAALVAARKQVDILTAQVASADGQLKRAEAGLEKAQLDLSYTRI 212

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P+ G +   ++     Y      L+ +VP  +   +       Q+ HV+ G   ++  
Sbjct: 213 TAPVDGMV-GERALRVGAYVNPGARLLSVVPLQQAYVV-GNFQETQLTHVQPGQPVSISV 270

Query: 353 PHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRN- 407
             ++    +K    +E I P      +    +  T  + +V+ +I      D+   L + 
Sbjct: 271 DTFS---GEKLHGHVESIAPATGVTFAAVKPDNATGNFTKVVQRIPVKIVFDDGQPLLSR 327

Query: 408 ---GFPAEVLFTAK 418
              G   E     +
Sbjct: 328 LRVGMSVEATIDTR 341



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 42/149 (28%), Gaps = 5/149 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK-----VSIKNLRCHIDTEKSALDF 119
           G IK   VE+  Q+  G  L T +  +    +D  +        ++       E+ A   
Sbjct: 54  GFIKDVLVEDNQQVTAGQLLATIDARDYQAALDAAQAQLLVAQAQSADARATLERQAALI 113

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              +  V     E+             +                +     R+ +     +
Sbjct: 114 AQAEAAVKAAQAEAAFADHEVNRYSRLAEQGAGTVQNAQQARSGVDQARARLANAQAALV 173

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEK 208
               +  +L A ++S    L   +   EK
Sbjct: 174 AARKQVDILTAQVASADGQLKRAEAGLEK 202


>gi|124514797|gb|EAY56309.1| Secretion protein (HlyD) [Leptospirillum rubarum]
          Length = 301

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 84/237 (35%), Gaps = 14/237 (5%)

Query: 188 LRALLSSHQKDLTMMKNLFEKN-------AVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LR +  +      + K L+ +         ++  D  + + +V      L  +  ++ + 
Sbjct: 45  LREVQLAFHDTGRIQKLLYLEGSPVKAGDLMALMDPVRYQDLVEGDLRALERDRAQRLDA 104

Query: 241 LRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            R  N +       F +  +  +    L+        + ++L    +  +   + +P+ G
Sbjct: 105 ERTWNRVRKLTRAAFNSRQQKDDARAALDMAIAQVKRDKAQLAYDTRQLDDTKVYAPVDG 164

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            IV N+     + A    P+  +   ++  + R  +   ++  V +G TA V    +   
Sbjct: 165 -IVQNRILEPGDMAFPQSPVYTLA-RTRPLWARVYLEEPELGRVHQGMTAYVTSDSFPGR 222

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           R   F   +  I P        +QT     +++  T +  S    +LR G P  V  
Sbjct: 223 R---FVGYVGYISPSAEFTPKEVQTLHQRTILVYRTRIYLSCPTRKLRLGMPVTVTI 276



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 58/157 (36%), Gaps = 6/157 (3%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC-HIDTEKSALDFLN 121
            +G I+K     GS +  G  +   + +   DL++    +++  R   +D E++     N
Sbjct: 54  DTGRIQKLLYLEGSPVKAGDLMALMDPVRYQDLVEGDLRALERDRAQRLDAERT----WN 109

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               +   AF SR+ Q  D         ++V        Y + ++  T++ +     +  
Sbjct: 110 RVRKLTRAAFNSRQ-QKDDARAALDMAIAQVKRDKAQLAYDTRQLDDTKVYAPVDGIVQN 168

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                   A   S    L   + L+ +  + + +L +
Sbjct: 169 RILEPGDMAFPQSPVYTLARTRPLWARVYLEEPELGR 205


>gi|224823953|ref|ZP_03697061.1| efflux transporter, RND family, MFP subunit [Lutiella nitroferrum
           2002]
 gi|224603372|gb|EEG09547.1| efflux transporter, RND family, MFP subunit [Lutiella nitroferrum
           2002]
          Length = 355

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 17/217 (7%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L E  A     +   + +      +LR ++ +++  LR+  + +      F +    I 
Sbjct: 78  RLVELRADEGAQVTPGQILARLDDSDLRASLGDEQARLRYAEQHWQRLQALFGSGFATID 137

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L+Q + T     +    +E+  +  T+ +P AG I+  +     ++   +QP+  +  
Sbjct: 138 -QLDQVRSTLDSARATTRHIEEQIKFMTLRAPGAGRIIR-RDGEVGDFIPVNQPVFYLAQ 195

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 I   V  + I  VK G  A +    +       F+  + +I         N   
Sbjct: 196 SGAPPRITTVVDEEDIAGVKVGQPAQITADGFPGR---VFEGKVAEITAKGDPLARN--- 249

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              Y V + +           L  G   EV       
Sbjct: 250 ---YRVRIALPP------GTPLLIGMTTEVNIILARR 277



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 34/89 (38%), Gaps = 1/89 (1%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +V ++G +     V  I     G + + + + G+Q+  G  L   +D +    +  ++ 
Sbjct: 55  QAVYATGNVEASVTV-TIAPQVGGRLVELRADEGAQVTPGQILARLDDSDLRASLGDEQA 113

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            ++    H    ++         D L++ 
Sbjct: 114 RLRYAEQHWQRLQALFGSGFATIDQLDQV 142


>gi|198244212|ref|YP_002217545.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197938728|gb|ACH76061.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|326625326|gb|EGE31671.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 355

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/300 (11%), Positives = 80/300 (26%), Gaps = 19/300 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F  + E L     +            I     ++      +          ++  
Sbjct: 63  VSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSEMRAAQSVV 122

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L S  K     ++L ++ AVS   L+            L     +       I 
Sbjct: 123 KQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESVRAALETAKAQVSAAKAAIE 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                 Q +   A    +  + +   +   + +P  G + Y + 
Sbjct: 183 AARTSIIQ-------------AQTRVEAAQATERRIVAD--IDDSELKAPRDGRVQY-RV 226

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V   +  Y+   +  +Q   +K G  A +      D+R     +
Sbjct: 227 AEPGEVLSAGGRVLNMV-DLRDVYMTFFLPTEQAGLLKIGGEARLVLDAAPDLRIPATIS 285

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            +  +     +  + ++ + +  + V  +I       +   ++ G P             
Sbjct: 286 FVASVAQFTPKTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLDERVPW 345


>gi|118475276|ref|YP_891463.1| secretion protein HlyD [Campylobacter fetus subsp. fetus 82-40]
 gi|118414502|gb|ABK82922.1| secretion protein HlyD [Campylobacter fetus subsp. fetus 82-40]
          Length = 327

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 109/347 (31%), Gaps = 79/347 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I       G+++ +G PL+  +D          + S+ +L+  I+ E   L  L + Y
Sbjct: 51  GEIVDISKIEGAKVSKGEPLVYLDD-------SYLQNSLNSLKSKINIENINLLKLESGY 103

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                        R+  I  ++  LE  
Sbjct: 104 ---------------------------------------------RIEEIKQSKARLEAA 118

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           ++ L+   +S  +     + L    A S+      +     +   L       + +    
Sbjct: 119 AANLKETQNSFNRQ----QKLMLSKATSEEAFMTAQTRFEAAKANLNLAQANYELLKNGY 174

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +   EA  E   YL                    L  +E   +   ++SP  G I+  +
Sbjct: 175 QKEDIEAQREIVRYLN-----------------INLEAIELDIKNSVLISPYDG-ILQKR 216

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                     ++P+++I       +IRA +  K +  +K      +    ++D R + + 
Sbjct: 217 YKEIGAITNANEPVVEIA-RDDKYFIRAYIDEKNLGKIKLEQKMKI----FSDARSEPYL 271

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
             I  I  +      N+QT E    ++   ++   D +  L+ G P 
Sbjct: 272 GYINFISSVAEFTPKNIQTTELRSDLVYKFEVTLIDKDDRLKQGMPV 318


>gi|172036623|ref|YP_001803124.1| hypothetical protein cce_1708 [Cyanothece sp. ATCC 51142]
 gi|171698077|gb|ACB51058.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 601

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 85/286 (29%), Gaps = 44/286 (15%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +++         + S++F   ++          T +    +  L+ +N    + A L   
Sbjct: 168 DRITSGQTLAQISASELF-TQVAEAQAETDTMRTALEVSKIEILEQKNSIKQIEADLGYL 226

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +K L     L  + A++Q+D +  E  V      L                   EA ++ 
Sbjct: 227 KKKLDRFSMLVSEGAITQDDYDVVESEVQSKQAML------------------SEAKVKI 268

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A    ++  D    Q       +K+           I +P+ G +   +        Q  
Sbjct: 269 ARLEAKVIND----QAKVQQAKAKVATASVMSSYTQIEAPVTGIVQE-RMVDPGMVVQPG 323

Query: 316 QPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              M IV         ++A V      +++ G     + P             +  I P 
Sbjct: 324 ---MGIVKIGDYSRIRLQANVAQHDATNIRIGTPIIAKIPG----TSVTINGQVSSIFPQ 376

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + Q   +             +   ++   ELR+G   E+    + 
Sbjct: 377 SNSQTRTVTV-----------EAVVNNPGGELRSGQFVEMELITQR 411



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 50/154 (32%), Gaps = 6/154 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +G I     VV +    +G +  + V  G +I  G  L      E    +   +     +
Sbjct: 140 TGTIEPY-QVVTVYPRVAGQLTNYSVYPGDRITSGQTLAQISASELFTQVAEAQAETDTM 198

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF-----LGKYHSTCSKVFNYGISSVY 161
           R  ++  K  +    N    +E      +++L  F      G        V    + S  
Sbjct: 199 RTALEVSKIEILEQKNSIKQIEADLGYLKKKLDRFSMLVSEGAITQDDYDVVESEVQSKQ 258

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             L     ++  +    ++ + K    +A +++ 
Sbjct: 259 AMLSEAKVKIARLEAKVINDQAKVQQAKAKVATA 292


>gi|300778751|ref|ZP_07088609.1| possible multidrug resistance efflux pump [Chryseobacterium gleum
           ATCC 35910]
 gi|300504261|gb|EFK35401.1| possible multidrug resistance efflux pump [Chryseobacterium gleum
           ATCC 35910]
          Length = 367

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/329 (11%), Positives = 106/329 (32%), Gaps = 30/329 (9%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +        +   I+   + +     +   +E     + + L+    +   T        
Sbjct: 57  NKTYTEAAQVEEFINPINTRVSAYIKEIKFIEHQHVKKGDTLVILDDREILTQLGQAEAA 116

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
             +         + + ++  N   +++  +  +A L + +++L   KNL    AV++   
Sbjct: 117 YQNAMAQKTATSSSVNTVSNNINVMQSNIAGAKARLWNAEQNLNRYKNLLAAEAVTRQQY 176

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           +Q +             ++++++      E+     +  A   +                
Sbjct: 177 DQVKTEYDAQKAAYETLVNQKQSANLSTTEVKSRLGINDAEIKR---------------T 221

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            S L + +       I +P  G ++  ++ S     Q  Q +  IV  +   ++ A    
Sbjct: 222 KSALDMAKINLSYTVITAPYDG-VMGRRTISEGQLIQPGQQVATIV-LNGQKWVTANFLE 279

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYE---- 388
            Q+ +++ G    +       +  KKF+ ++  +        S    +  T  + +    
Sbjct: 280 SQMPNIRIGEK--ISMTA-DALGGKKFEGVVTAVSAATGSRYSSVPTDNSTGNFIKVQQR 336

Query: 389 --VILKITDLAFSDNNIELRNGFPAEVLF 415
             V ++ T     ++  +L  G    V  
Sbjct: 337 IPVRIEFTASNKKEDLDKLSAGMNMNVNI 365



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/226 (10%), Positives = 79/226 (34%), Gaps = 13/226 (5%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           IK+ +      + +G  L+  +D E    +   + + +N         S+++ ++N  +V
Sbjct: 81  IKEIKFIEHQHVKKGDTLVILDDREILTQLGQAEAAYQNAMAQKTATSSSVNTVSNNINV 140

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGI-SSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++      + +L +     +   + +    +    Y  +K +    ++ Y   ++ +  +
Sbjct: 141 MQSNIAGAKARLWNAEQNLNRYKNLLAAEAVTRQQYDQVKTEYDAQKAAYETLVNQKQSA 200

Query: 186 SL----LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +L    +++ L  +  ++   K        S  D+ +        T      +  +    
Sbjct: 201 NLSTTEVKSRLGINDAEIKRTK--------SALDMAKINLSYTVITAPYDGVMGRRTISE 252

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             + +   +      N  K ++ +  ++Q        K+++     
Sbjct: 253 GQLIQPGQQVATIVLNGQKWVTANFLESQMPNIRIGEKISMTADAL 298


>gi|298290155|ref|YP_003692094.1| efflux transporter RND family, MFP subunit [Starkeya novella DSM
           506]
 gi|296926666|gb|ADH87475.1| efflux transporter, RND family, MFP subunit [Starkeya novella DSM
           506]
          Length = 400

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 70/220 (31%), Gaps = 13/220 (5%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             R+  + ++R D+  K   L  L                  A     + Q ER    +T
Sbjct: 84  QARIEELAVDRNDVVAKGETLARLAFDDLSGEFDAAEASAHAAERTVSVAQAERDRAVAT 143

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL-------EQNQRTFADEMSKL 280
           LE     HE++  L       +    +     ++   DL       EQ +       +++
Sbjct: 144 LEKARATHERQVALLAKGVASEAGLEDALATRRQAEADLARAGRAVEQAEAERDAATARI 203

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +     +   + +PI+G +V  ++            ++ +V       + A++    I 
Sbjct: 204 AVARAQLDDSVLRAPISGVVVS-RTHHVGEVLTPGSEVLHLV-DPASLVLTARLDESVIS 261

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
            V  G  A V F       E      + ++   + ++   
Sbjct: 262 AVLPGQAARVTFT----RAEDPISGHVLRLRREVDEETRE 297


>gi|297565503|ref|YP_003684475.1| RND family efflux transporter MFP subunit [Meiothermus silvanus DSM
           9946]
 gi|296849952|gb|ADH62967.1| efflux transporter, RND family, MFP subunit [Meiothermus silvanus
           DSM 9946]
          Length = 448

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 58/437 (13%), Positives = 130/437 (29%), Gaps = 100/437 (22%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSIL---------------LPIEIS-----VSS 46
             +KR+          L +I ++G+ T  +L                 +E       VS 
Sbjct: 4   AQVKRSRSQRWVWARWLLLIILVGIGTAVVLRRPAAQPQTTSSPETAQVEQGPFRVSVSG 63

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G ++    V         II     + G ++ +G  ++  +       +D  +++++  
Sbjct: 64  PGTLVAHQTVDLKAQVQGTIIY--LPKVGDRVTKGQLVVQIDPTSYQRAVDNARLALQKA 121

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  +++ ++                                                   
Sbjct: 122 QAQLESARAT-------------------------------------------------- 131

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           + T +          E   +  +A L + + +L   + ++     +Q +L   +R V ++
Sbjct: 132 QATALAGQRQAIASAEAAYASAQAQLETARANLAATQRVYAAGGATQQELTSAQRAVAQA 191

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             +L       +            A+  FA      ++DL   Q         L   E+ 
Sbjct: 192 QAQLDSARVALET-----------AHSSFALKEASNAQDLRNLQLAVDQAALTLKNAEQD 240

Query: 287 REQKTILSPIAGTIVYNQS----FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                + +P +G +    +       S     S  L+ ++  +    +  ++   +I  V
Sbjct: 241 LANTKLYAPFSGIVSAVNAQVGGVGVSAGVSGSSALLTLI-DTSSVDLPVQIDETEISQV 299

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G    V    + +     F+  +  I P  S   N      +Y V + I      + +
Sbjct: 300 KVGQKVNVTLDAFNNQT---FQGTVTAISPSASVVSNIAV---FY-VTVNIP-----NPD 347

Query: 403 IELRNGFPAEVLFTAKN 419
             LR G  AE     + 
Sbjct: 348 GRLRPGMTAEGEILIQE 364


>gi|226229034|ref|YP_002763140.1| secretion protein HlyD family protein [Gemmatimonas aurantiaca
           T-27]
 gi|226092225|dbj|BAH40670.1| secretion protein HlyD family protein [Gemmatimonas aurantiaca
           T-27]
          Length = 464

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 90/269 (33%), Gaps = 27/269 (10%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ--KDLTMMKNLFEKNAVSQN 214
           ++ + RS      +  S+ L + D +   + L   L+  Q  +DL  M+   E+  ++++
Sbjct: 98  VAELDRSPLASKMQEVSLALQKADAQYTQAQLDTTLNLSQAREDLRNMQLQLEEKRIAKD 157

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                      +  E      + +  L        ++  ++    ++ S  + +      
Sbjct: 158 Q----------AQFEAPSVRRQAEIDLEKATRGLAKSTTDYKTKQEQASAKMREVGADLE 207

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYN-----QSFSSSNYAQQSQPLMKIVPHSKLTY 329
            + ++L I+       TI +P  G ++Y      +  ++ +     +P +  +P      
Sbjct: 208 RQRNRLKIINDVMAGFTIRAPADGMVIYVKEWNGRKKTTGSQVTPWEPTVATLPDLTQME 267

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
               +    ++ V       +          K+ +  I ++  +  Q+ N       +EV
Sbjct: 268 SITFLNEIDVRKVAVNQEVQI---ALDADPSKRLRGKIVQVANVGEQRPNADAK--VFEV 322

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            + +        +  LR G         +
Sbjct: 323 RVHV-----EKPDTTLRPGMTTSNAVLTQ 346



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 43/136 (31%), Gaps = 7/136 (5%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G+ +  G  +   +         +++VS+   +      ++ LD   N     E   
Sbjct: 86  VAEGTVVKSGDVVAELDRSPLAS--KMQEVSLALQKADAQYTQAQLDTTLNLSQARE--- 140

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           + R  QL     +     ++     +    ++        R +  +  D + K     A 
Sbjct: 141 DLRNMQLQLEEKRIAKDQAQFEAPSVR--RQAEIDLEKATRGLAKSTTDYKTKQEQASAK 198

Query: 192 LSSHQKDLTMMKNLFE 207
           +     DL   +N  +
Sbjct: 199 MREVGADLERQRNRLK 214


>gi|91176550|gb|ABE26666.1| membrane-fusion protein [Francisella tularensis subsp.
           mediasiatica]
          Length = 357

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)

Query: 242 RHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +Y++A +E  NY +E+++   DL + +   A + S+L           + +P  G
Sbjct: 136 ASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL-----------VKAPSDG 184

Query: 299 TIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT-------- 349
            IV  +         + +  L  IVP SK   +   V    +  VK G            
Sbjct: 185 VIVD-RIHGLGGVIVKDTDVLATIVPDSKSRIVELWVNSMDVPLVKIGDKVMLQFEGWPA 243

Query: 350 VRFPHYADIREKKFKAIIEKIDP 372
           V+F  +  +    F+  +  I P
Sbjct: 244 VQFSGWPQVAIGTFEGEVIFISP 266



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 70/165 (42%), Gaps = 11/165 (6%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQV 72
           S K++ LL ++  I +     ++P + ++   G++      +    I +P  G + K+ V
Sbjct: 15  SFKKIILLVLLSTIVVGVVLAMIPWQQTIDGYGDVTTLSPSERQQNISAPIGGRLGKWYV 74

Query: 73  ENGSQILQGTPLLT---FEDIETTDLIDLK---KVSIKNLRCHIDTEKSALDFLNNKYDV 126
             G  + +G P++     +    + L + K   ++ I +++  I   K+ ++   +KY V
Sbjct: 75  FEGDSVKKGDPIVEVLDLDPEVVSRLEEEKSAIELGINSVKLAIKNTKNNIE--RHKYLV 132

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            + A   R  +        ++      N  ++ V   +  + +R+
Sbjct: 133 DKGASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL 177


>gi|260768317|ref|ZP_05877251.1| macrolide-specific efflux protein MacA [Vibrio furnissii CIP
           102972]
 gi|260616347|gb|EEX41532.1| macrolide-specific efflux protein MacA [Vibrio furnissii CIP
           102972]
          Length = 390

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 96/270 (35%), Gaps = 20/270 (7%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +S   ++  +++         L  E K   L A + S  +     +N  ++   S N +
Sbjct: 52  QASKLVAVGAQVSGQIEKLAVSLGDEVKQGDLVAQIDSLTQ-----QNSLKEANASLNSI 106

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFAD 275
           N Q R       + +   + QK ML   ++   +A+ E A    E+   +LEQ +     
Sbjct: 107 NAQIRAKQAQIRQAQAEYNRQKGMLA--DKASSKADYESAEASLEVYKAELEQLKANLEQ 164

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAK 333
               +   +      TI +P  GT+VY+           +Q    I+  +      I+A+
Sbjct: 165 AKITVDSAKVDLGYTTIQAPFNGTVVYSAV-EEGQTVNANQTTPTIIELAQLDKMTIKAQ 223

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE----YYEV 389
           ++   + +VK G           + R       IE    ++   D +L   +    YY  
Sbjct: 224 ISEADVVNVKPGLPVYFTILGKPNKRYHGTLRAIEPGPTLMDGDDKDLSVSDSEAIYYHG 283

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + ++ +         LR G  A+V      
Sbjct: 284 LFEVDNPDRV-----LRIGMTAQVSVILDK 308



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 53/132 (40%), Gaps = 3/132 (2%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               IE +V ++G +     +V + +  SG I+K  V  G ++ QG  +   + +   + 
Sbjct: 37  YRGKIENTVLATGMLQAS-KLVAVGAQVSGQIEKLAVSLGDEVKQGDLVAQIDSLTQQNS 95

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +     S+ ++   I  +++ +     +Y+  +     +     D+     S   +V+  
Sbjct: 96  LKEANASLNSINAQIRAKQAQIRQAQAEYNRQKGMLADKASSKADYESAEASL--EVYKA 153

Query: 156 GISSVYRSLKMK 167
            +  +  +L+  
Sbjct: 154 ELEQLKANLEQA 165


>gi|218131239|ref|ZP_03460043.1| hypothetical protein BACEGG_02845 [Bacteroides eggerthii DSM 20697]
 gi|217986541|gb|EEC52876.1| hypothetical protein BACEGG_02845 [Bacteroides eggerthii DSM 20697]
          Length = 296

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 85/247 (34%), Gaps = 33/247 (13%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         ++S+   R D+  + +  +  +   Q++   + NL    A +Q  L+ 
Sbjct: 68  QLYLKKLQLEANVKSVEGQRPDILKQVAATKEQIVQAQRERDRVYNLLRVGAANQKQLDD 127

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E ++     +L       +N  + +        ++ A                      
Sbjct: 128 AESLLEVLRKQLAAQNSTLQNSDQSLTWQSSSVGVQVAQ--------------------- 166

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               ++   ++  I SP+ GT++  +   +   A    PL K V   +  Y+RA +T +Q
Sbjct: 167 ----IQDQLKKCHIASPLTGTVLA-KYAEAGELAAPGTPLFK-VADMEQVYLRAYITSEQ 220

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV +  Y     K++  ++  I              + +    Y V + +
Sbjct: 221 LSEVKLGQKVTV-YSDYGKEVRKEYPGVVTWISDSSEFTPKTILTKDERANLVYAVKVAV 279

Query: 394 TDLAFSD 400
            +     
Sbjct: 280 KNDGMLK 286


>gi|24113729|ref|NP_708239.1| multidrug resistance protein K [Shigella flexneri 2a str. 301]
 gi|30063775|ref|NP_837946.1| multidrug resistance protein K [Shigella flexneri 2a str. 2457T]
 gi|110806321|ref|YP_689841.1| multidrug resistance protein K [Shigella flexneri 5 str. 8401]
 gi|24052803|gb|AAN43946.1| multidrug resistance protein K [Shigella flexneri 2a str. 301]
 gi|30042030|gb|AAP17756.1| multidrug resistance protein K [Shigella flexneri 2a str. 2457T]
 gi|110615869|gb|ABF04536.1| multidrug resistance protein K [Shigella flexneri 5 str. 8401]
 gi|281601796|gb|ADA74780.1| Multidrug resistance protein K [Shigella flexneri 2002017]
 gi|313651188|gb|EFS15587.1| multidrug resistance protein K [Shigella flexneri 2a str. 2457T]
 gi|333001506|gb|EGK21074.1| multidrug resistance protein K [Shigella flexneri VA-6]
          Length = 387

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLVLKRTDIRSPVTGYIAQ-RSVQVGETVSSGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/218 (11%), Positives = 78/218 (35%), Gaps = 11/218 (5%)

Query: 22  LLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           LL I+  I     ++        + S+ +     N   I +  SG +     ++ + + Q
Sbjct: 19  LLVIVLFIAFSGAYAYWSMELEDMISTDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQ 78

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           G  L++ +  + T  ++  K ++ N+     + ++  ++ + +  + +    +   +   
Sbjct: 79  GDILVSLDKTDATIALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNR 138

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLS 193
              L   G       +     + S   +L   +   ++     ++  L  +  ++ A  +
Sbjct: 139 RVPLAKQGVISKETLEHTKDTLISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADA 198

Query: 194 SHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTL 228
           + +  L + +          ++Q  +   E +    +L
Sbjct: 199 TKEAWLVLKRTDIRSPVTGYIAQRSVQVGETVSSGQSL 236


>gi|39934718|ref|NP_946994.1| permease [Rhodopseudomonas palustris CGA009]
 gi|39648568|emb|CAE27089.1| membrane permeases, predicted cation efflux pumps [Rhodopseudomonas
           palustris CGA009]
          Length = 420

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 88/284 (30%), Gaps = 26/284 (9%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              S++       + +  +      + + +   +L+         ++  Q  +  ++ L 
Sbjct: 80  EIASQITGTVKDVLVKEGEQVHQGQQLVAIEASELQASVVQAEGAVAQAQARVRQLRELT 139

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHE----QKNMLRHINELYDEANLEFANYLKEI 262
           +  A       Q   +  ++  E    +       K  L    +  D A  +      ++
Sbjct: 140 KPAADEALKQAQANLLNAQAAYERASKLAASGYGTKATLDDATKNLDVARTQVRTAELQV 199

Query: 263 ------SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                   D    +      ++ L   +      TI++P  G ++  ++       Q  +
Sbjct: 200 FTTSPGGSDFVMAETQLGQALANLNTAQARLGYATIVAPRDG-VLITRNVERGTVVQPGK 258

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L+ + P   +  +  ++  K +  +  G  A      Y D   K+F A +  I+P +  
Sbjct: 259 ALLVLAPAGDIQIV-VQIDEKNLGQLALGQHAMASADAYPD---KRFDATLSYINPSVDI 314

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              ++      E+ LK+ D         LR      V       
Sbjct: 315 NRASV------EIKLKVDDPPDY-----LRQDMTVSVDIATARR 347



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 2/140 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  +V +SG I      VEI S  +G +K   V+ G Q+ QG  L+  E  E    + 
Sbjct: 61  GNLVQTVVASGHIETP-YRVEIASQITGTVKDVLVKEGEQVHQGQQLVAIEASELQASVV 119

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   +  +   +  L        + +        Q         +         +
Sbjct: 120 QAEGAVAQAQARVRQLR-ELTKPAADEALKQAQANLLNAQAAYERASKLAASGYGTKATL 178

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
               ++L +  T++R+  L 
Sbjct: 179 DDATKNLDVARTQVRTAELQ 198


>gi|329957971|ref|ZP_08298403.1| hypothetical protein HMPREF9445_03288 [Bacteroides clarus YIT
           12056]
 gi|328522120|gb|EGF49236.1| hypothetical protein HMPREF9445_03288 [Bacteroides clarus YIT
           12056]
          Length = 297

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 84/247 (34%), Gaps = 33/247 (13%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y          +S+   R D+  + +  +  +   Q++   + NL    A +Q  L+ 
Sbjct: 68  QLYLKKLQLEASAKSVEGQRPDILKQVAATKEQILQAQRERDRVANLLRVGAANQKQLDD 127

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E ++     +L       +N  + +        ++ A                      
Sbjct: 128 AESLLKVLRKQLTAQNSTLRNSDQSLTWQSSSVGIQVAQM-------------------- 167

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                E   ++  I+SP+ GT++  +   +   A    PL KI    +  Y+RA +T +Q
Sbjct: 168 -----EDQLKKCHIISPLTGTVLA-KYAEAGELAAPGTPLFKIA-DMEQIYLRAYITSEQ 220

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  V+ G   TV +  Y     K++  I+  I              + +    Y + + +
Sbjct: 221 LSEVQLGQKVTV-YSDYGKDVRKEYPGIVIWISDSSEFTPKTILTKDERANLVYAIKVAV 279

Query: 394 TDLAFSD 400
            +     
Sbjct: 280 KNDGMLK 286


>gi|187930977|ref|YP_001890961.1| membrane-fusion protein [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|187711886|gb|ACD30183.1| membrane-fusion protein [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 356

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 24/143 (16%)

Query: 242 RHINELYDEANLEFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +Y++A +E  NY +E+++   DL + +   A + S+L           + +P  G
Sbjct: 135 ASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL-----------VKAPSDG 183

Query: 299 TIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT-------- 349
            IV  +         + +  L  IVP SK   +   V    +  VK G            
Sbjct: 184 VIVD-RIHGLGGVIVKDTDVLATIVPDSKSRIVELWVNSMDVPLVKIGDKVMLQFEGWPA 242

Query: 350 VRFPHYADIREKKFKAIIEKIDP 372
           V+F  +  +    F+  +  I P
Sbjct: 243 VQFSGWPQVAIGTFEGEVIFISP 265



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 70/165 (42%), Gaps = 11/165 (6%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQV 72
           S K++ LL ++  I +     ++P + ++   G++      +    I +P  G + K+ V
Sbjct: 14  SFKKIILLVLLSTIVVGVVLAMIPWQQTIDGYGDVTTLSPSERQQNISAPIGGRLGKWYV 73

Query: 73  ENGSQILQGTPLLT---FEDIETTDLIDLK---KVSIKNLRCHIDTEKSALDFLNNKYDV 126
             G  + +G P++     +    + L + K   ++ I +++  I   K+ ++   +KY V
Sbjct: 74  FEGDSVKKGDPIVEVLDLDPEVVSRLEEEKSAIELGINSVKLAIKNTKNNIE--RHKYLV 131

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            + A   R  +        ++      N  ++ V   +  + +R+
Sbjct: 132 DKGASTQRIYEQAQMEMVNYTQELAKLNVDLAKVKVQIARQQSRL 176


>gi|187923628|ref|YP_001895270.1| efflux pump membrane protein [Burkholderia phytofirmans PsJN]
 gi|187714822|gb|ACD16046.1| efflux pump membrane protein [Burkholderia phytofirmans PsJN]
          Length = 424

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 84/271 (30%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R ++ +    + + +  +A LS  Q DL     + +  AVSQ
Sbjct: 112 RVALEQAEANLAQTVRQVRGLFADDNQYQAQVAQRQADLSRAQDDLKRRLTVAQTGAVSQ 171

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  +  +     +     N    
Sbjct: 172 EE------------------ISHARDAVKSAQAAVDAAQQQLNSNRALTANTTIANHPNV 213

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        +  + +P+ G +   +S           PLM IVP     ++ A 
Sbjct: 214 QAAAAKVRDAYLNNARNNLPAPVTGYVAK-RSVQVGQRVSPGTPLMAIVPLGG-VWVDAN 271

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 272 FKEVQLKHMRIGQPVELTADVYGSSVVYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 331

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V + +       + + +     A+V   
Sbjct: 332 RLPVRIALDPKELEQHPLRIGLSMQADVSIK 362


>gi|39936759|ref|NP_949035.1| putative multidrug resistance protein [Rhodopseudomonas palustris
           CGA009]
 gi|39650615|emb|CAE29138.1| putative multidrug resistance protein [Rhodopseudomonas palustris
           CGA009]
          Length = 392

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 93/289 (32%), Gaps = 37/289 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +  ST +++    ++S    L   +  +R ++ +    +    L  A  +  Q DL
Sbjct: 90  DVLVELDSTDARI---ELASAKAELAQAVRNVRGLFASDARSDADVHLRLAEFNKAQGDL 146

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + + L    AVS+  L      +  +   L      +   L  +N     +N       
Sbjct: 147 NVKQTLISSGAVSRESLRHASDALSAAQAALASAQQARAQALALVNNSTLASN------- 199

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                              ++       E+  I +P++G +   +S          + +M
Sbjct: 200 -----------PPVQVAAERVRAAALAIERTRITAPVSGMVAQ-RSIQLGRRVGPGEKMM 247

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +VP     ++ A     Q+Q V  G  A V    Y       +   +  I+        
Sbjct: 248 TVVPLD-RLWVDANFKEIQLQGVCAGQPAKVTADIYGRSIT--YHGTVRGIEAGTGAAFA 304

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             P  +   N ++  +   V + +       + + +  G  AEV    +
Sbjct: 305 LLPAQNATGNWIKVVQRAPVRISLDPSELIQHPLRI--GMSAEVEVDTR 351



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 2/91 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             L    +L     +    W+ L     ++  + +      +V+I S  SG + +   +N
Sbjct: 25  KRLAWFGILLATTAVAAGAWAYLS--NPALRHTDDAYVGGQLVQITSEMSGAVTRILADN 82

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
              +  G  L+  +  +    +   K  +  
Sbjct: 83  TDWVAAGDVLVELDSTDARIELASAKAELAQ 113


>gi|300820963|ref|ZP_07101113.1| efflux pump membrane protein [Escherichia coli MS 119-7]
 gi|300903095|ref|ZP_07121032.1| efflux pump membrane protein [Escherichia coli MS 84-1]
 gi|301304741|ref|ZP_07210848.1| efflux pump membrane protein [Escherichia coli MS 124-1]
 gi|300404872|gb|EFJ88410.1| efflux pump membrane protein [Escherichia coli MS 84-1]
 gi|300526716|gb|EFK47785.1| efflux pump membrane protein [Escherichia coli MS 119-7]
 gi|300839972|gb|EFK67732.1| efflux pump membrane protein [Escherichia coli MS 124-1]
 gi|315256386|gb|EFU36354.1| efflux pump membrane protein [Escherichia coli MS 85-1]
          Length = 351

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 57  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 116

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 117 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 158

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 159 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 216

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 217 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 274

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 275 RVPVEVSLDPKELMEHPLRIGLSMTATID 303


>gi|317053206|ref|YP_004118973.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
 gi|316952945|gb|ADU72417.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
          Length = 340

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 59/359 (16%), Positives = 109/359 (30%), Gaps = 85/359 (23%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V+ G  +  G  L T +                     I  +++       K 
Sbjct: 53  GRISTVAVDEGDHVKAGQILATLDTKA----------------LEIQEQQAVAQLDVQKQ 96

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            V E+   +R E++     +  S  +++                T  + I    LD+  +
Sbjct: 97  TVREQQAGARPEEIAQAKAQLASAQAQLQKATEDITRIQRISATTGGKGISKQELDM-AR 155

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           SSLL A  S  ++   +   L EK    +            S  ++R    +   M  HI
Sbjct: 156 SSLLVAQSSVKERQANLT--LMEKGVRKEQR--------EASVAQVRATQAQLALMQYHI 205

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           ++                                             + SP+   +V  +
Sbjct: 206 SQA-------------------------------------------ELRSPVDA-VVRAR 221

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                +     + +  +   S+  ++R  ++   +  V+ G TA +R   + D   K  +
Sbjct: 222 LQEPGDMTGPQKAVFTLA-LSEPKWVRVWLSQNDLGRVRSGMTAQIRTDSFPD---KPVQ 277

Query: 365 AIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             +  I  +      S Q   L+T   YEV +   D      +  LR G PA V    +
Sbjct: 278 GKVGFISSVAEFTPKSVQTEELRTNLVYEVRIVAEDP-----DDVLRMGQPATVTVNTQ 331


>gi|186682179|ref|YP_001865375.1| RND family efflux transporter MFP subunit [Nostoc punctiforme PCC
           73102]
 gi|186464631|gb|ACC80432.1| efflux transporter, RND family, MFP subunit [Nostoc punctiforme PCC
           73102]
          Length = 525

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 90/346 (26%), Gaps = 67/346 (19%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   + V I    SG I     + G  + +G  L T +D   T  I   + ++   +  +
Sbjct: 91  VQSGSTVSITPEASGRIIGVYFKKGQDVKKGQLLFTLDDRSQTAAIQQAQGTVAKDQASV 150

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              + AL                                       +  V ++    +  
Sbjct: 151 QQARDALTR------------------------------------DLGQVDQARATLVKD 174

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
              +   + +L       RA     Q        L++K A+S +   Q       +T  L
Sbjct: 175 QALVRQAQANLAKD----RAQAEFAQGQSDRYSALYKKGAISLDQAQQYVSNSKSATATL 230

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           + +     N    +           A    +    +   Q     +   L   +      
Sbjct: 231 QADREAIANAEAVLKSDRVALTNAGAVVQGD-RAAIANAQAVVRSDRGALDNTKVQLSYA 289

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH--------- 341
            I +PI G    N   +  N  Q +                 ++ P Q+           
Sbjct: 290 KIYAPIDGRA-GNILVTQGNVVQANST--------TPLVTLTQIRPIQVAFSIPETNLPQ 340

Query: 342 ----VKKG-YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
               ++ G     V FP   D        ++  ++  +      +Q
Sbjct: 341 VQKYMQNGRLKVDVTFP--NDQAHPA-PGVLTFVNNTVDNTTGTIQ 383


>gi|312885926|ref|ZP_07745557.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
 gi|311301587|gb|EFQ78625.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
          Length = 447

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 75/249 (30%), Gaps = 28/249 (11%)

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY- 258
            ++K+ +E+   S N          +   + + N    +   +   ELY++  L  + + 
Sbjct: 95  DILKSGYERAVASYNTQKASVGNASQMLNQAKANFANSEAKYKRSKELYEKKVLSASEFD 154

Query: 259 -----LKEISRDLEQNQRT-------FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                      +LE  ++         A   + +   +    + +I SP+ G +      
Sbjct: 155 AATADYASARANLEAARQNQIGSNYGLAQSSASVKEAQDNLAKTSIYSPVDGVVSKLSVE 214

Query: 307 S----SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                          +M I        +   V    I  V  G +A +    +     KK
Sbjct: 215 KGERVLGTIQNVGTEIMTIS-DLGALDVNVDVNENDINRVAVGDSAVIEVDAF---LGKK 270

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF-------SDNNIELRNGFPAEVLF 415
           F  ++ +I    +    N      + V +++   ++       + N    + G  A V  
Sbjct: 271 FSGLVREIGSSANVVGTNADQVTNFTVKVRLLPESYARLVAKDAKNPSPFKPGLSATVDI 330

Query: 416 TAKNTTLAQ 424
               T    
Sbjct: 331 QTNRTIALS 339



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 56/172 (32%), Gaps = 3/172 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS+SG+I  E  V  I S  SG I +  ++ G  + +G  L            +  
Sbjct: 46  IVETVSASGKIKPELEVK-ISSEVSGEIVELPIKEGDIVKKGQLLCRVRPDILKSGYERA 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGI 157
             S    +  +      L+     +   E  ++  +E  +            +  +    
Sbjct: 105 VASYNTQKASVGNASQMLNQAKANFANSEAKYKRSKELYEKKVLSASEFDAATADYASAR 164

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +++  + + ++     +  +   ++     L         D  + K   EK 
Sbjct: 165 ANLEAARQNQIGSNYGLAQSSASVKEAQDNLAKTSIYSPVDGVVSKLSVEKG 216


>gi|186476483|ref|YP_001857953.1| efflux pump membrane protein [Burkholderia phymatum STM815]
 gi|184192942|gb|ACC70907.1| efflux pump membrane protein [Burkholderia phymatum STM815]
          Length = 406

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 91/273 (33%), Gaps = 32/273 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y +    + + ++ +A LS  Q DL     + +  AVSQ
Sbjct: 96  RIALQSAEANLGQVVRQVRGLYADDSQYQAQVAVRQADLSRAQDDLKRRMQVAQTGAVSQ 155

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     +    
Sbjct: 156 EE------------------ISHARDAVKSAQAALDAAQQQLASNRALTANTTIASHPNV 197

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +++        + T+ +P+ G +   +S           PLM IVP +   ++ A 
Sbjct: 198 QAAAARVRDAYLNNARNTLPAPVTGYVAK-RSVQVGQRVAPGNPLMAIVPLN-AVWVDAN 255

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q++H++ G    +    Y      K++  +              P  +   N ++ 
Sbjct: 256 FKEVQLKHMRIGQPVELTADVYGSSV--KYRGKVVGFSAGTGSAFSLLPAQNATGNWIKV 313

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   V + +       + + +      +V   
Sbjct: 314 VQRLPVRIALDPQELEKHPLRIGLSMQVDVSIK 346



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 9/92 (9%), Positives = 32/92 (34%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N+V+I    +G +     ++   +  G PL+  +  ++   +   + ++  +   + 
Sbjct: 55  VNGNIVQITPQVTGTVIAVNADDTQTVKAGDPLVVLDPADSRIALQSAEANLGQVVRQVR 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
              +       +  V +      ++ L   + 
Sbjct: 115 GLYADDSQYQAQVAVRQADLSRAQDDLKRRMQ 146


>gi|225630232|ref|YP_002727023.1| efflux transporter, RND family, MFP subunit [Wolbachia sp. wRi]
 gi|225592213|gb|ACN95232.1| efflux transporter, RND family, MFP subunit [Wolbachia sp. wRi]
          Length = 360

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 72/213 (33%), Gaps = 20/213 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--EFANYLKEISRDLE 267
           A+   D  + +R      +E  + I + +     + +   E +   +           +E
Sbjct: 95  AIYLPDGEKVKRDDVVLKIEDYDRIEQAQKAKALLKQREIEYDSSHKLNKKGYGAQIQVE 154

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
                     + L  LE   E   + SPI G I    +    ++    Q +  +V   ++
Sbjct: 155 AAFTALQSAKADLKRLELDLENTAVTSPIDGYIDKINAN-EGDFVNAGQKIADVVNFDQI 213

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +   V+  ++  ++ G TA +       +  K+    +  I  I   +  +      Y
Sbjct: 214 LVV-LYVSENEVNKIELGSTAQINL-----LDGKELAGEVSFISKIAEPKTGS------Y 261

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            V +K+T+       I L+ G  A V   +   
Sbjct: 262 RVEVKVTNNKM----ISLQ-GLTANVRLPSGER 289



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 71/253 (28%), Gaps = 45/253 (17%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSS-------------------------SGEILNED 54
           + + SI  I+     S  L  + +V S                         SG +    
Sbjct: 22  IIISSIAFILLFFISSAFLKKDQAVHSDNATSSFSVKTQECAPQNRTIYLNFSGTVNPLH 81

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
               +      II    + +G ++ +   +L  ED +  +     K  +K      + E 
Sbjct: 82  RASLVSKISGKIIA-IYLPDGEKVKRDDVVLKIEDYDRIEQAQKAKALLKQR----EIEY 136

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
            +   LN K    +   E+    L             + N  ++S       K+      
Sbjct: 137 DSSHKLNKKGYGAQIQVEAAFTALQSAKADLKRLELDLENTAVTSPIDGYIDKINANEGD 196

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN- 233
           ++N             +L                  VS+N++N+ E         L    
Sbjct: 197 FVNAGQKIADVVNFDQILVVL--------------YVSENEVNKIELGSTAQINLLDGKE 242

Query: 234 IHEQKNMLRHINE 246
           +  + + +  I E
Sbjct: 243 LAGEVSFISKIAE 255


>gi|170694415|ref|ZP_02885568.1| efflux pump membrane protein [Burkholderia graminis C4D1M]
 gi|170140549|gb|EDT08724.1| efflux pump membrane protein [Burkholderia graminis C4D1M]
          Length = 420

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 86/271 (31%), Gaps = 28/271 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R ++ +    + + +  ++ LS  Q DL     + +  AVSQ
Sbjct: 106 RVALEQAEANLAQTVRQVRGLFADDNQYQAQVAQRQSDLSRAQDDLKRRMTVAQTGAVSQ 165

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      + A  + A+     +     N    
Sbjct: 166 EE------------------ISHARDAVKSAQAAVEAAQQQLASNRALTANTTIANHPNV 207

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM IVP     ++ A 
Sbjct: 208 QASAAKVRDAYLNNARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMAIVPLG-AVWVDAN 265

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIISQQDNNLQTQE 385
               Q++H++ G    +    Y                      + P  +   N ++  +
Sbjct: 266 FKEVQLKHMRIGQPVELTADVYGSSVVYHGKVVGFSAGTGSAFSLLPAQNATGNWIKVVQ 325

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V + +       + + +     A+V   
Sbjct: 326 RLPVRIALDPQELEKHPLRIGLSMQADVSIK 356



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 35/99 (35%), Gaps = 4/99 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +     ++   +  G PL+  +  +    ++  + ++        
Sbjct: 65  VNGNVVQITPQVTGTVVAVNADDTQTVKAGDPLVVLDPADARVALEQAEANL----AQTV 120

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +   L   +N+Y       +S   +  D L +  +   
Sbjct: 121 RQVRGLFADDNQYQAQVAQRQSDLSRAQDDLKRRMTVAQ 159


>gi|13471427|ref|NP_102993.1| hypothetical protein mlr1394 [Mesorhizobium loti MAFF303099]
 gi|14022169|dbj|BAB48779.1| mlr1394 [Mesorhizobium loti MAFF303099]
          Length = 430

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 57/185 (30%), Gaps = 14/185 (7%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +   L       D++              L+  +   A   + L   +      TI +PI
Sbjct: 159 RAAALTKRGMATDQSLEAATATRDRSKAALDSAKANLAIANADLKSQQTDLANSTIYAPI 218

Query: 297 AGTIVYNQSFSSSNYAQQSQ-PLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
            G ++          A   Q P++ I+    +   + A V    I  VK G  A      
Sbjct: 219 DGIVLTRSVDPGQTVASSLQAPVLFIIAADLRNMELVAAVDEADIGAVKTGQHARFTVDA 278

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           + D     F A I  I       D  +     Y   L++      +N + LR G  A V 
Sbjct: 279 FPDR---PFDAEIRDISYASVTTDGVVT----YNARLEVD-----NNELLLRPGMTATVS 326

Query: 415 FTAKN 419
              + 
Sbjct: 327 VVTRQ 331



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 63/178 (35%), Gaps = 17/178 (9%)

Query: 17  LKRMTLLSIIGIIGLITW--------------SILLPIEISVSSSGEILNEDNVVEIKSP 62
              +TL+ +   +GL  W              +    + + VS++G +     V +I S 
Sbjct: 37  YALLTLIVLAAGLGLYQWYAGTPARIDFTTVPAAKADLTVKVSATGTLQPLTQV-DISSQ 95

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SGII+   V+   Q+ +G  L   +       + +++          + E + +    N
Sbjct: 96  LSGIIRSVSVKENQQVKKGDVLAALDT--AKLQVQIERAEASAKGAAANVEDATVTLAEN 153

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +  ++  A  ++     D   +  +         + S   +L +    ++S   +  +
Sbjct: 154 ESALVRAAALTKRGMATDQSLEAATATRDRSKAALDSAKANLAIANADLKSQQTDLAN 211


>gi|186685887|ref|YP_001869083.1| RND family efflux transporter MFP subunit [Nostoc punctiforme PCC
           73102]
 gi|186468339|gb|ACC84140.1| efflux transporter, RND family, MFP subunit [Nostoc punctiforme PCC
           73102]
          Length = 518

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 82/254 (32%), Gaps = 20/254 (7%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +   L    E R   L   +G        V     + +   LK     + ++       
Sbjct: 136 FRIVSLRSQVEGRLLALNLDVGDRVKLGQNVGQLDDAILSTQLKQAEAELAALKSEVARA 195

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            N+ S  RA +   + ++            +Q D  +Q+R+       + E   ++    
Sbjct: 196 NNQVSNARADVERARLEVVQ----------AQADSERQQRLF--KAGAIAEQTAQKARTQ 243

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                    A  E     ++    +   Q     + + +   ++ R    + SPI G + 
Sbjct: 244 AQTAAQALRAAQEQVRTEQQA---VAAAQGRVLAQQALVAQTKERRSYARLTSPITGIVT 300

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +     N  Q    ++KI   +++  +  +V+  ++  ++ G +  VR   + +    
Sbjct: 301 E-KVTEPGNLLQAGNEVVKIGDFNRVKVV-VQVSELELAQIEVGQSVQVRLDAFPNET-- 356

Query: 362 KFKAIIEKIDPIIS 375
                + +I P   
Sbjct: 357 -LIGRVTRISPAAD 369



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/144 (11%), Positives = 53/144 (36%), Gaps = 5/144 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDF 119
           G +    ++ G ++  G  +   +D   +  +   +  +  L     R +     +  D 
Sbjct: 147 GRLLALNLDVGDRVKLGQNVGQLDDAILSTQLKQAEAELAALKSEVARANNQVSNARADV 206

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + +V++   +S  +Q L   G      ++       +  ++L+    ++R+      
Sbjct: 207 ERARLEVVQAQADSERQQRLFKAGAIAEQTAQKARTQAQTAAQALRAAQEQVRTEQQAVA 266

Query: 180 DLENKSSLLRALLSSHQKDLTMMK 203
             + +    +AL++  ++  +  +
Sbjct: 267 AAQGRVLAQQALVAQTKERRSYAR 290


>gi|225166440|ref|ZP_03728096.1| efflux transporter, RND family, MFP subunit [Opitutaceae bacterium
           TAV2]
 gi|224799319|gb|EEG17890.1| efflux transporter, RND family, MFP subunit [Opitutaceae bacterium
           TAV2]
          Length = 366

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 86/257 (33%), Gaps = 24/257 (9%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L   L   + I    L +E   +LL   +      +   K     N   Q  L +++  +
Sbjct: 65  LNSNLKPGKIIKEGELLIEIDPTLLSIEVQRLANQIETTKTQNALNLDQQISLERRKEDL 124

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                + RE  + +K ++R           +   ++++  +D     +   +  ++L + 
Sbjct: 125 EIYERQFREGTYPEKEIVRR--------RRDLDLFVEQQKKDQINRDQQLRELETQLELR 176

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           ++   +  +L+   GT+     +           ++++   S    + A+V  +    +K
Sbjct: 177 KRDLSKTKLLATTTGTVTDIYVY-PGELVSNRSAVVRL--FSDELIVEARVNEEDFSGIK 233

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G  A VR   Y D       A +E++ P    +    Q    +  ++K           
Sbjct: 234 PGLEAYVRLLTYGDTLYP---ATVEQVLPNADTET---QQYRLFLAMIKFDPA------- 280

Query: 404 ELRNGFPAEVLFTAKNT 420
           +L  G   E        
Sbjct: 281 KLIPGLTGEASIIRSRR 297



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 61/164 (37%), Gaps = 17/164 (10%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +V +   I    NV  I +  +G++    ++ G  I +G  L+  +         L  + 
Sbjct: 41  AVPAIVNIRPAFNV-TINAEVAGLVLNSNLKPGKIIKEGELLIEIDPT-------LLSIE 92

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           ++ L   I+T K+      ++   LE+  E  E      + +            I    R
Sbjct: 93  VQRLANQIETTKTQNALNLDQQISLERRKEDLE------IYERQFREGTYPEKEIVRRRR 146

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
            L + + + +   +NR   + +   L   L   ++DL+  K L 
Sbjct: 147 DLDLFVEQQKKDQINR---DQQLRELETQLELRKRDLSKTKLLA 187


>gi|326315208|ref|YP_004232880.1| secretion protein HlyD family protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372044|gb|ADX44313.1| secretion protein HlyD family protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 429

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 92/280 (32%), Gaps = 26/280 (9%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL-------SSHQKDLTMMKNLF 206
              ++     L   + + R++Y+N   L  + +L +A +       +  Q+DL   ++L 
Sbjct: 111 RVALAQAEAGLAQAVRQARTVYVNNGSLNAQITLRQAEVTKARSDVARAQEDLKRRQSLS 170

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              AVS+ +L   +  V  +   L       +     +                 +    
Sbjct: 171 GNGAVSKEELQHAQNQVDAARSALAAAQAGVEAAREQLTSNQSLTQGVPVQENPNVLAAA 230

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            + +  +  E            +  + +P+ G +   ++           PLM IVP   
Sbjct: 231 AKVREAYLAER-----------RTALPAPVDGYVAK-RTVQLGQRVAPGAPLMTIVPL-S 277

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR--EKKFKAIIEKIDP----IISQQDNN 380
             ++ A     Q+++++ G +AT+    Y        K   +          + +Q    
Sbjct: 278 HVWVDANFKENQLRNLRLGQSATLTADLYGSKVEYTGKVVGLGVGTGAAFALLPAQNATG 337

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              +    V ++I   A    +  LR G   +V    ++ 
Sbjct: 338 NWIKVVQRVPVRIALDAEQLKDHPLRVGLSMDVTVNTQDR 377



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 43/146 (29%), Gaps = 2/146 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + NV++I     G +     ++   +  G PL+  +  +    +   +  +        
Sbjct: 70  VQGNVIQITPQTGGTVMSIMADDTDFVKAGAPLVQLDPADARVALAQAEAGLAQAVRQAR 129

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T       LN +  + +         +           S   N  +S     L+    ++
Sbjct: 130 TVYVNNGSLNAQITLRQAEVTKARSDVARAQEDLKRRQSLSGNGAVS--KEELQHAQNQV 187

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQK 197
            +        +      R  L+S+Q 
Sbjct: 188 DAARSALAAAQAGVEAAREQLTSNQS 213


>gi|309782259|ref|ZP_07676987.1| multidrug efflux MFS membrane fusion protein [Ralstonia sp.
           5_7_47FAA]
 gi|308918952|gb|EFP64621.1| multidrug efflux MFS membrane fusion protein [Ralstonia sp.
           5_7_47FAA]
          Length = 433

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 89/295 (30%), Gaps = 28/295 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + QL+                 +     +L   + ++R++Y N        ++  
Sbjct: 91  AIRADDTQLVTSGQPVIELDRADARVALEQAEAALAQTVRQVRTLYSNTSAYTATLAMRE 150

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L+  + DL   K +    AVSQ +++  +  V  +   L     + +       +   
Sbjct: 151 SDLAKAKDDLARRKQIAGTGAVSQEEISHAQTAVQAAQSALEAAKEQLQGNRVLTEQTTL 210

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +        ++                          + ++ + + G +   +S    
Sbjct: 211 ERHPNVLQAAAKVRE------------------AYLAYARTSLPASVTGYVAK-RSVQVG 251

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--------K 361
                  PLM IVP     ++ A     Q++H++ G    +    Y              
Sbjct: 252 QRVAPGTPLMAIVPLD-QLWVDANFKEVQVRHMRVGQPVELVADVYGSSVTYHGKVVGFS 310

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                   + P  +   N ++  +   V + +      D+ + +     A+V   
Sbjct: 311 AGTGSAFSLLPAQNATGNWIKVVQRLPVRVSLDPKELKDHPLRVGLSMEAKVDIH 365



 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 66/183 (36%), Gaps = 12/183 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT----DLIDLKKVSIKNLR 107
            + NVV++    +G +   + ++   +  G P++  +  +              +++ +R
Sbjct: 74  VQGNVVQVTPQVAGTVIAIRADDTQLVTSGQPVIELDRADARVALEQAEAALAQTVRQVR 133

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFE--SREEQLL--DFLGKYHSTCSKVFNYGISSVYRS 163
                  +    L  +   L KA +  +R +Q+     + +   + ++       S   +
Sbjct: 134 TLYSNTSAYTATLAMRESDLAKAKDDLARRKQIAGTGAVSQEEISHAQTAVQAAQSALEA 193

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQE 220
            K +L   R +   +  LE   ++L+A     +  L   +          V++  +   +
Sbjct: 194 AKEQLQGNR-VLTEQTTLERHPNVLQAAAKVREAYLAYARTSLPASVTGYVAKRSVQVGQ 252

Query: 221 RIV 223
           R+ 
Sbjct: 253 RVA 255


>gi|307730024|ref|YP_003907248.1| efflux pump membrane protein [Burkholderia sp. CCGE1003]
 gi|307584559|gb|ADN57957.1| efflux pump membrane protein [Burkholderia sp. CCGE1003]
          Length = 418

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 86/273 (31%), Gaps = 32/273 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R ++ +    + + +  +A LS  Q DL     + +  AVS 
Sbjct: 106 RVALEQAEANLAQTVRQVRGLFADDNQYQAQVAQRQADLSRAQDDLKRRLTVAQTGAVSL 165

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      + A  + A+     +     N    
Sbjct: 166 EE------------------ISHARDAVKSAQAAVEAAQQQLASNRALTANTTIANHPNV 207

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+        + T+ +P+ G +   +S           PLM IVP     ++ A 
Sbjct: 208 QAAAAKVRDAYLNNARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMAIVPLGG-VWVDAN 265

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q++H++ G    +    Y       +   +              P  +   N ++ 
Sbjct: 266 FKEVQLKHMRIGQPVELTADVYGSSV--VYHGTVVGFSAGTGSAFSLLPAQNATGNWIKV 323

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   V + +       + + +     A+V   
Sbjct: 324 VQRLPVRIALDPQELEKHPLRIGLSMQADVSIK 356



 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 35/99 (35%), Gaps = 4/99 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +     ++   +  G P++  +  +    ++  + ++        
Sbjct: 65  VNGNVVQITPQVTGTVVAVNADDTQTVKAGDPVVVLDPADARVALEQAEANL----AQTV 120

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +   L   +N+Y       ++   +  D L +  +   
Sbjct: 121 RQVRGLFADDNQYQAQVAQRQADLSRAQDDLKRRLTVAQ 159


>gi|327399581|ref|YP_004340450.1| secretion protein HlyD family protein [Hippea maritima DSM 10411]
 gi|327182210|gb|AEA34391.1| secretion protein HlyD family protein [Hippea maritima DSM 10411]
          Length = 329

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 85/275 (30%), Gaps = 35/275 (12%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            K F   + +   ++++   R+         +E +  L  +     Q D    + LF+  
Sbjct: 82  PKPFEIALKAAKANVELAKARLSQAKTAIPLVEAEIELYSSKFKKAQWDYQRAERLFKLK 141

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + ++               L+             NE  ++A  E+ +            
Sbjct: 142 VIPKDKYEYYLTNYNVIKASLKAE-----------NEKLNQAKAEYKS-----------A 179

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q+      + L   +       I +P  G I      +   +     P+  IVP      
Sbjct: 180 QKDLDAAKASLENAKLNLSYTKIKAPYDGFITKKSVET-GKFVSPQIPICAIVPDKGAWI 238

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQE 385
           + A     QI+ ++KG    +    Y     KKF+  ++ I     +          +  
Sbjct: 239 V-ANYKESQIEKMRKGMKVVIEIDAYP---GKKFEGFLDSIQYGTGEVFSLFPPQNASGN 294

Query: 386 YYEV--ILKITDLAFSDNNIELRNGFPA--EVLFT 416
           + +V   + +  L     N+ LR G  A   VL  
Sbjct: 295 WIKVTQRIPVKILFKKRPNVPLRVGMSAYTTVLVK 329



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 57/150 (38%), Gaps = 5/150 (3%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    SG I +  +++   + +G  L   +       +   K +++  +  +   K+A+ 
Sbjct: 52  VNPRVSGTILRVFIDDNQYVKKGQVLAVIDPKPFEIALKAAKANVELAKARLSQAKTAIP 111

Query: 119 FLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISS---VYRSLKMKLTRMRS 173
            +  + ++    F+  +   Q  + L K        + Y +++   +  SLK +  ++  
Sbjct: 112 LVEAEIELYSSKFKKAQWDYQRAERLFKLKVIPKDKYEYYLTNYNVIKASLKAENEKLNQ 171

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                   +      +A L + + +L+  K
Sbjct: 172 AKAEYKSAQKDLDAAKASLENAKLNLSYTK 201


>gi|315180025|gb|ADT86939.1| efflux transporter, RND family, MFP subunit [Vibrio furnissii NCTC
           11218]
          Length = 395

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 96/270 (35%), Gaps = 20/270 (7%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +S   ++  +++         L  E K   L A + S  +     +N  ++   S N +
Sbjct: 57  QASKLVAVGAQVSGQIEKLAVSLGDEVKQGDLVAQIDSLTQ-----QNSLKEANASLNSI 111

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFAD 275
           N Q R       + +   + QK ML   ++   +A+ E A    E+   +LEQ +     
Sbjct: 112 NAQIRAKQAQIRQAQAEYNRQKGMLA--DKASSKADYESAEASLEVYKAELEQLKANLEQ 169

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAK 333
               +   +      TI +P  GT+VY+           +Q    I+  +      I+A+
Sbjct: 170 AKITVDSAKVDLGYTTIQAPFNGTVVYSAV-EEGQTVNANQTTPTIIELAQLDKMTIKAQ 228

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE----YYEV 389
           ++   + +VK G           + R       IE    ++   D +L   +    YY  
Sbjct: 229 ISEADVVNVKPGLPVYFTILGKPNKRYHGTLRAIEPGPTLMDGDDKDLSVSDSEAIYYHG 288

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + ++ +         LR G  A+V      
Sbjct: 289 LFEVDNPDRV-----LRIGMTAQVSVILDK 313



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 53/132 (40%), Gaps = 3/132 (2%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               IE +V ++G +     +V + +  SG I+K  V  G ++ QG  +   + +   + 
Sbjct: 42  YRGKIENTVLATGMLQAS-KLVAVGAQVSGQIEKLAVSLGDEVKQGDLVAQIDSLTQQNS 100

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +     S+ ++   I  +++ +     +Y+  +     +     D+     S   +V+  
Sbjct: 101 LKEANASLNSINAQIRAKQAQIRQAQAEYNRQKGMLADKASSKADYESAEASL--EVYKA 158

Query: 156 GISSVYRSLKMK 167
            +  +  +L+  
Sbjct: 159 ELEQLKANLEQA 170


>gi|261343796|ref|ZP_05971441.1| secretion protein, HlyD family [Providencia rustigianii DSM 4541]
 gi|282568180|gb|EFB73715.1| secretion protein, HlyD family [Providencia rustigianii DSM 4541]
          Length = 356

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 85/293 (29%), Gaps = 19/293 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F  + ++L     +            +     ++    + +      +L  +   
Sbjct: 64  VKEGDFVQQGQELARMDTRALQEQLHEVQAQLRQAISAVVTAESGLVQRKSEKLAAQAVV 123

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L + QK L   + L + NAVSQ  ++     +  +   L  +    K  +    
Sbjct: 124 RQREAELDAAQKRLNRSRVLVKTNAVSQQQVDDDTAQMQGAKAALEAS----KAQVAASI 179

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              D A          +       +R  AD            E   + +P  G I Y + 
Sbjct: 180 AAIDSAQAGIVQAKNRVEAATATERRITAD-----------LEDSILKAPRNGRIQY-RV 227

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +Q   V  G    +       I       
Sbjct: 228 AEPGEVLGSGGRVLNMVDLSD-VYMTFFLPTEQAGKVALGSEVHIILDAAPHIVIPAKTT 286

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +  +     +  +  N + +  + V  +I+      +   ++ G P +    
Sbjct: 287 FVASVAQFTPKTVETQNERLKLMFRVRARISPELLEKHLEYVKTGLPGKAYIR 339



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 77/212 (36%), Gaps = 6/212 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLP-IEIS-VSSSGEILNEDNVVEIKSPFSGI 66
           +K N+   +  + L+ +I   G   WS+    +      S+G I   +  ++I +  +G 
Sbjct: 1   MKTNNRKIVFYIILVLVIVAGGFYYWSMNSSDLSGGFAQSNGRIEATE--IDIATKTAGR 58

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V+ G  + QG  L   +     + +   +  ++     + T +S L    ++   
Sbjct: 59  IDTILVKEGDFVQQGQELARMDTRALQEQLHEVQAQLRQAISAVVTAESGLVQRKSEKLA 118

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +     RE +L     + +   S+V     +   + +     +M+         + + +
Sbjct: 119 AQAVVRQREAELDAAQKRLN--RSRVLVKTNAVSQQQVDDDTAQMQGAKAALEASKAQVA 176

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
              A + S Q  +   KN  E    ++  +  
Sbjct: 177 ASIAAIDSAQAGIVQAKNRVEAATATERRITA 208


>gi|110642557|ref|YP_670287.1| multidrug resistance protein K [Escherichia coli 536]
 gi|110344149|gb|ABG70386.1| multidrug resistance protein K [Escherichia coli 536]
          Length = 346

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 52  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKEA 111

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 112 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVIE 153

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 154 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 211

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 212 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 269

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 270 RVPVEVSLDPKELMEHPLRIGLSMTATID 298



 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 20/187 (10%), Positives = 67/187 (35%), Gaps = 10/187 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N   I +  SG +     ++ + + QG  L++ +  + T  ++  K ++ N+     
Sbjct: 9   VTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTN 68

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           + ++  ++ + +  + +    +   +      L   G       +     + S   +L  
Sbjct: 69  KLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKEALEHTKDTLISSKAALNA 128

Query: 167 KLTRMRS--IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
            +   ++    +    L  +  ++ A  ++ +  L + +   +      ++Q  +   E 
Sbjct: 129 AIQAYKANKALVMNTPLNRQPQVIEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGET 188

Query: 222 IVYKSTL 228
           +    +L
Sbjct: 189 VSPGQSL 195


>gi|117624586|ref|YP_853499.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein [Escherichia coli APEC O1]
 gi|300983737|ref|ZP_07176718.1| efflux pump membrane protein [Escherichia coli MS 45-1]
 gi|300997590|ref|ZP_07181799.1| efflux pump membrane protein [Escherichia coli MS 200-1]
 gi|301049122|ref|ZP_07196103.1| efflux pump membrane protein [Escherichia coli MS 185-1]
 gi|115513710|gb|ABJ01785.1| EmrKY-TolC multidrug resistance efflux pump, membrane fusion
           protein [Escherichia coli APEC O1]
 gi|300299068|gb|EFJ55453.1| efflux pump membrane protein [Escherichia coli MS 185-1]
 gi|300304161|gb|EFJ58681.1| efflux pump membrane protein [Escherichia coli MS 200-1]
 gi|300408466|gb|EFJ92004.1| efflux pump membrane protein [Escherichia coli MS 45-1]
 gi|315288204|gb|EFU47604.1| efflux pump membrane protein [Escherichia coli MS 110-3]
 gi|315293497|gb|EFU52849.1| efflux pump membrane protein [Escherichia coli MS 153-1]
 gi|315298196|gb|EFU57460.1| efflux pump membrane protein [Escherichia coli MS 16-3]
 gi|324009211|gb|EGB78430.1| efflux pump membrane protein [Escherichia coli MS 57-2]
 gi|324011072|gb|EGB80291.1| efflux pump membrane protein [Escherichia coli MS 60-1]
          Length = 351

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 57  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKEA 116

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 117 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVIE 158

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 159 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 216

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 217 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 274

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 275 RVPVEVSLDPKELMEHPLRIGLSMTATID 303



 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 20/187 (10%), Positives = 67/187 (35%), Gaps = 10/187 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N   I +  SG +     ++ + + QG  L++ +  + T  ++  K ++ N+     
Sbjct: 14  VTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLANIVRQTN 73

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           + ++  ++ + +  + +    +   +      L   G       +     + S   +L  
Sbjct: 74  KLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKEALEHTKDTLISSKAALNA 133

Query: 167 KLTRMRS--IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
            +   ++    +    L  +  ++ A  ++ +  L + +   +      ++Q  +   E 
Sbjct: 134 AIQAYKANKALVMNTPLNRQPQVIEAADATKEAWLALKRTDIKSPVTGYIAQRSVQVGET 193

Query: 222 IVYKSTL 228
           +    +L
Sbjct: 194 VSPGQSL 200


>gi|332992619|gb|AEF02674.1| major facilitator superfamily multidrug efflux pump membrane fusion
           protein [Alteromonas sp. SN2]
          Length = 346

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 79/251 (31%), Gaps = 16/251 (6%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
            N   ++ K S     +   +      K        +Q   +   +    S   L++   
Sbjct: 99  ANLASIKAKLSQQHTKIEQAEATYEASKAALALAKANQTRFSNLAQDGSGSKQALQQ--A 156

Query: 236 EQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           + +  +   N    +A L F     ++    L+  +       + L           + +
Sbjct: 157 DAQLTIAQANVAKSKAELTFTQQQTQVLEASLDAARAALELAEADLDTQTLKLSYTKVYA 216

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           PI G I   +      +    +PLM +VP +   YI A     Q+ H+K G T  V    
Sbjct: 217 PIDGII-GKKLARVGEFINTGEPLMVVVPSN-TLYITANYRETQLAHIKAGQTVNVEVDA 274

Query: 355 YADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVI----LKITDLAFSDNNIELR 406
              I     K  +  + P      S    +  T  + +++    ++I      ++  +LR
Sbjct: 275 LPGIT---LKGKVASLGPASNVSYSAVAPHNATGNFTKIVQRLPIRIGLDGAQEHIEDLR 331

Query: 407 NGFPAEVLFTA 417
            G         
Sbjct: 332 VGMSVVPTIET 342



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 54/135 (40%), Gaps = 5/135 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   VE   Q+ QG  ++  ED +    +   K    +   ++ + K+ L   + K
Sbjct: 55  SGTVKAVLVEENQQVKQGDLMVLIEDDDVKLAVAASKAKAHSANANLASIKAKLSQQHTK 114

Query: 124 YDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +  E  +E+ +  L          S  ++  +    ++ ++         ++  ++ +L
Sbjct: 115 IEQAEATYEASKAALALAKANQTRFSNLAQDGSGSKQALQQADAQLTIAQANVAKSKAEL 174

Query: 182 ---ENKSSLLRALLS 193
              + ++ +L A L 
Sbjct: 175 TFTQQQTQVLEASLD 189


>gi|332184395|gb|AEE26649.1| Membrane fusion component of tripartite multidrug resistance system
           [Francisella cf. novicida 3523]
          Length = 341

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 78/255 (30%), Gaps = 19/255 (7%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL- 230
           +   L       K    +  L+  Q+ +    N+ + N             +    ++L 
Sbjct: 96  KDYQLKVAQANTKVIQAKGQLAIAQEQV----NVAKSNLTKAQSSLDTATSMADRYIKLY 151

Query: 231 RENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +++    ++  ++IN+       +   Y  LK+    +E  +                  
Sbjct: 152 KDDAGSLQDAQKYINQKVQAQKAKDEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLG 211

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             T+ +P  G +   + +         Q L   +  +K  +I A      +  +K G   
Sbjct: 212 YTTLTAPDDGYVSNLKLY-KGQLVSPGQALFGFI-DNKKWWIDANFKETDLDRIKPGQKV 269

Query: 349 TVRFPHYADIREKKFK------AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
            +    Y+     K          +  + P  +   N ++  + + V + +     +D  
Sbjct: 270 EIELDMYSHSYTGKVDSISYATGSVFSLLPPENATGNWVKVTQRFPVKIILN----NDPK 325

Query: 403 IELRNGFPAEVLFTA 417
             LR G  A V    
Sbjct: 326 YPLRVGASATVKVDT 340



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/220 (9%), Positives = 66/220 (30%), Gaps = 7/220 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +  K +   SII +  L  +           S+       +++ I     G I+K  + N
Sbjct: 22  SPKKMIIGCSIIAVTALSIYGYY-KYNKIFPSTDNAYVNADIISISPKVGGYIEKVYIHN 80

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L+  E  +    +      +   +  +   +  ++   +     + + ++ 
Sbjct: 81  NQFVHKGDKLVQIEPKDYQLKVAQANTKVIQAKGQLAIAQEQVNVAKSNLTKAQSSLDTA 140

Query: 135 EEQLLDFLGKYHSTC-----SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                 ++  Y         ++ +        ++     + ++   L     + +    +
Sbjct: 141 TSMADRYIKLYKDDAGSLQDAQKYINQKVQAQKAKDEAYSSLKQALLQVEIAKAQIGAAK 200

Query: 190 ALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIVYKSTL 228
               +   +L        +   VS   L + + +     L
Sbjct: 201 LSYDNANLNLGYTTLTAPDDGYVSNLKLYKGQLVSPGQAL 240


>gi|320173477|gb|EFW48675.1| Multidrug resistance protein A [Shigella dysenteriae CDC 74-1112]
 gi|320185067|gb|EFW59847.1| Multidrug resistance protein A [Shigella flexneri CDC 796-83]
 gi|332344196|gb|AEE57530.1| multidrug resistance protein K [Escherichia coli UMNK88]
          Length = 346

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 52  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 111

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 112 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 153

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 154 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 211

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 212 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 269

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 270 RVPVEVSLDPKELMEHPLRIGLSMTATID 298


>gi|254495970|ref|ZP_05108878.1| hlyD family secretion protein [Legionella drancourtii LLAP12]
 gi|254354848|gb|EET13475.1| hlyD family secretion protein [Legionella drancourtii LLAP12]
          Length = 337

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/354 (11%), Positives = 95/354 (26%), Gaps = 73/354 (20%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IKK  V  G  +  G  L+  +       +   K  +   +  +   +S L    N+ 
Sbjct: 28  GKIKKIFVREGDYVKIGQILVQMDTDVLDAQLKEAKGRLLMAQSSVAINQSKLIQAKNRK 87

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   + RE +L            +V    ++   R +       + +  N+   E+ 
Sbjct: 88  ASADAVLKQREAEL------------EVAKKRLTRSSRLVLDGAASKQEVDDNKATYESA 135

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +   A L+   +              ++  +   ER V  S   +       + +   I
Sbjct: 136 IAAKNASLAQTGE--------------AEAAIVTAEREVIGSEAAVTTAKGSVERIQADI 181

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N                                              + SP  G + Y +
Sbjct: 182 N-------------------------------------------DSALKSPREGRVQY-R 197

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                       P++ +V  S   Y+   ++      V  G  A +              
Sbjct: 198 VAQPGEIVSAGSPILNLVDLSD-VYMTFFLSTIYAGRVAIGEEARILLDAAPQDVIPANI 256

Query: 365 AIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           + I  +     +  +  + + +  + +  +I       +  +++ G P      
Sbjct: 257 SFISDVAQFTPKTVESTSEREKLMFRIKARIPKALLQKHIAQVKTGVPGTTYIR 310


>gi|312173346|emb|CBX81601.1| Multidrug resistance protein A [Erwinia amylovora ATCC BAA-2158]
          Length = 395

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 85/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +        +L   + +   + +N    +    L +  L   Q DL   + L     + +
Sbjct: 98  DQAFEKAQTALATSVRQTHQLIINGKQYQATIELQKTALEQAQADLRRREPLGAAKLLGK 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            DL      V  +   L   + +       I     E                  NQ   
Sbjct: 158 EDLQHARDAVATAKARLDVAMQQYNANQAMILNTSLE------------------NQPAV 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L     T ++ T++SPI G +   +S    +    + PL+ IVP +   ++ A 
Sbjct: 200 KQSAAQLRDAWLTLQRTTVVSPIDGYVSR-RSVQVGSQISSTTPLLAIVPANN-LWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+  ++ G  ATV    Y D     +   +  +D          P  +   N ++ 
Sbjct: 258 FKETQLAGMRIGQPATVVSDIYGDDV--VYHGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V + +     + + + +
Sbjct: 316 VQRLPVRIALDAQEVAKHPLRI 337


>gi|254714141|ref|ZP_05175952.1| HlyD family protein secretion protein [Brucella ceti M644/93/1]
 gi|254716801|ref|ZP_05178612.1| HlyD family protein secretion protein [Brucella ceti M13/05/1]
 gi|261218600|ref|ZP_05932881.1| multidrug resistance protein mdtN [Brucella ceti M13/05/1]
 gi|260923689|gb|EEX90257.1| multidrug resistance protein mdtN [Brucella ceti M13/05/1]
          Length = 347

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 76/228 (33%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 68  LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFNRVSA 127

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 128 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 183

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+PIAGT+   ++    ++     P   ++  
Sbjct: 184 -----------AKAEVELAERNVRLTRVLAPIAGTVTQVENIQPGSFLAVGDPAFTLI-- 230

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 231 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITP 275



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/231 (9%), Positives = 67/231 (29%), Gaps = 24/231 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIKSPFSGIIKKF 70
            + + ++  +  I +  W             G+ ++ED+       V I    SG + + 
Sbjct: 3   RRILLIVGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAITPQVSGQVIRV 54

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V     + +G  L   +       +D  K ++      +    + L     +       
Sbjct: 55  AVGPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKL----AGLVLTYKQQLASVAQ 110

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +       +   +  +     F            +++ +              + L   
Sbjct: 111 AKDDVTFAQEQFNRVSALVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGT 170

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           L    Q+  +    L  K   ++ +L ++   + +    +   + + +N+ 
Sbjct: 171 LDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPIAGTVTQVENIQ 215


>gi|194364989|ref|YP_002027599.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194347793|gb|ACF50916.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 386

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 100/324 (30%), Gaps = 29/324 (8%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R  I      ++    +  V +    +  E LL    + ++         + S   +L  
Sbjct: 83  RGQITVMAPQVNGYVTEVLVKDFQHVTEGEPLLRIDDRIYTQRVAQAQATLDSARAALAN 142

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                          +   S  +A L   + +L   + L  +  VS ND     R  +++
Sbjct: 143 SDQSQAQNRAQIASAQATLSAGQAELQRSRNELKRYEELAAQQLVSIND-----RDKFRT 197

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           T    +   +Q      I E   E  +      K +   +E  Q       ++L +    
Sbjct: 198 TQASAQASVQQSQAQIRIAE---ETLVSTQVARKSLEAQVESAQ-------AQLELARID 247

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                I +P  G I          Y      L+ +VP     ++ A     Q   +  G 
Sbjct: 248 LANTVIHAPRDGQISEASVR-VGQYVAAGSQLLFLVP--DTLWVVANYKEGQTWGMAIGQ 304

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAF 398
            AT     +   + +  +  +++I P    +      +  +  + +V+    ++I+    
Sbjct: 305 PATFSVDAF---QGQVLRGRVQEIAPATGSEFSVLRPDNASGNFTKVVQRLPVRISINEG 361

Query: 399 SDNNIELRNGFPAEVLFTAKNTTL 422
                +LR G    V     +  +
Sbjct: 362 QKLAAQLRPGMSVIVRVDTASKPM 385



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 14/193 (7%)

Query: 24  SIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +++GI  ++  W +  P   SV  +        +  +    +G + +  V++   + +G 
Sbjct: 54  ALLGIALILRAWHLW-PFTSSVMVTDNAYVRGQITVMAPQVNGYVTEVLVKDFQHVTEGE 112

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRC------------HIDTEKSALDFLNNKYDVLEKA 130
           PLL  +D   T  +   + ++ + R                   +       + ++    
Sbjct: 113 PLLRIDDRIYTQRVAQAQATLDSARAALANSDQSQAQNRAQIASAQATLSAGQAELQRSR 172

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            E +  + L             F    +S   S++    ++R      +  +     L A
Sbjct: 173 NELKRYEELAAQQLVSINDRDKFRTTQASAQASVQQSQAQIRIAEETLVSTQVARKSLEA 232

Query: 191 LLSSHQKDLTMMK 203
            + S Q  L + +
Sbjct: 233 QVESAQAQLELAR 245


>gi|300901335|ref|ZP_07119427.1| efflux pump membrane protein [Escherichia coli MS 198-1]
 gi|300355236|gb|EFJ71106.1| efflux pump membrane protein [Escherichia coli MS 198-1]
          Length = 351

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 57  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 116

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 117 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 158

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 159 AADATKEAWLVLKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 216

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 217 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 274

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 275 RVPVEVSLDPKELMEHPLRIGLSMTATID 303


>gi|256819308|ref|YP_003140587.1| efflux transporter, RND family, MFP subunit [Capnocytophaga
           ochracea DSM 7271]
 gi|256580891|gb|ACU92026.1| efflux transporter, RND family, MFP subunit [Capnocytophaga
           ochracea DSM 7271]
          Length = 414

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 78/233 (33%), Gaps = 19/233 (8%)

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + +++ +++A S   +    +    +  E  E+    K +      +  +++ + A   
Sbjct: 96  DIYQSVVKRSAASLETVRASLQQSSATLKEAEESYKRNKVLFDK--GVISKSDWDKAVSA 153

Query: 260 KEISRDLEQNQR-TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----Q 314
            E+++   ++ R      M+ ++  +   ++  I SP  GTI                  
Sbjct: 154 YEVAKASRESARFNVQSAMASVSEAQDNLKKTIIYSPTDGTISKLSVELGERVVGTMQMT 213

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              +M+ V +     +   V    I  +  G +  V    Y       FK  +  I    
Sbjct: 214 GTEIMR-VANLHNMEVEVDVNENDIVKISVGDSVNVEVDAYLKR---VFKGTVTNIANTA 269

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNI-------ELRNGFPAEVLFTAKNT 420
           +   +  Q   + +V + I + ++ D +          R G  A V    +  
Sbjct: 270 NATTSADQVTNF-KVKIHIEEASYKDLSENKPVGYSPFRPGMTATVDIITQTK 321



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 6/140 (4%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS++G+I  E  +  + S  SG I +  V+ G  + +G  L+         ++     S+
Sbjct: 51  VSATGKIQPELEIK-LSSEVSGEIIELPVKEGQMVKKGDLLVRINPDIYQSVVKRSAASL 109

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           + +R  +    + L      Y   +  F+       D            +    +S   +
Sbjct: 110 ETVRASLQQSSATLKEAEESYKRNKVLFDKGVISKSD-----WDKAVSAYEVAKASRESA 164

Query: 164 LKMKLTRMRSIYLNRLDLEN 183
                + M S+   + +L+ 
Sbjct: 165 RFNVQSAMASVSEAQDNLKK 184


>gi|268315645|ref|YP_003289364.1| efflux transporter, RND family, MFP subunit [Rhodothermus marinus
           DSM 4252]
 gi|262333179|gb|ACY46976.1| efflux transporter, RND family, MFP subunit [Rhodothermus marinus
           DSM 4252]
          Length = 453

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/355 (14%), Positives = 99/355 (27%), Gaps = 28/355 (7%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            T +  +        ++      R   L           +K     I+ V  +       
Sbjct: 6   ATRRLLIILAVLLGLLVVIGVGGRALGLFKQEAGIEVEVAKAERRDITQVVTASGRVQPE 65

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLFEKNAVSQND--LNQQERIVYKST 227
           +       +  E     +R      +  L   ++  F +  V Q +  + Q    + +  
Sbjct: 66  VEVTISPDVSGEIVELPVREGDRVEKGQLLARIRPDFYEAQVQQAEAGVAQARATLKQRE 125

Query: 228 LELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEK 285
            +L     E K        +    ++ E A    E++   LE  +       ++L    +
Sbjct: 126 ADLLRAEGEFKRQKALYEKQAISASDFEAARTQYEVAKAALEAARYAVESAEAQLREARE 185

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
              +  I +P++G +                     +M+I        +  +V    + +
Sbjct: 186 QLAKTIIYAPMSGIVSKLDVELGERVVGTSQMAGTEMMRIA-RLDQMEMEVEVNENDVVN 244

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL-------KIT 394
           V  G TAT+    Y +   +     I     I SQ      T    +V +       + T
Sbjct: 245 VSIGDTATIHIDAYPERTFRGVVTEIANSARITSQGTQEQVTNFPVKVRILGTVALPEAT 304

Query: 395 DLAFSDNNI---------ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
               +              LR G    V       T+   +  PI     + F R
Sbjct: 305 PSPVARAEEVPASAELLPPLRPGMSGTVDIYT--KTVFDAVAVPIQAVTVRDFNR 357



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 62/192 (32%), Gaps = 2/192 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   V++SG +  E  V  I    SG I +  V  G ++ +G  L           +   
Sbjct: 52  ITQVVTASGRVQPEVEV-TISPDVSGEIVELPVREGDRVEKGQLLARIRPDFYEAQVQQA 110

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL-GKYHSTCSKVFNYGIS 158
           +  +   R  +   ++ L     ++   +  +E +     DF   +     +K       
Sbjct: 111 EAGVAQARATLKQREADLLRAEGEFKRQKALYEKQAISASDFEAARTQYEVAKAALEAAR 170

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               S + +L   R      +     S ++  L     + +     +     +    L+Q
Sbjct: 171 YAVESAEAQLREAREQLAKTIIYAPMSGIVSKLDVELGERVVGTSQMAGTEMMRIARLDQ 230

Query: 219 QERIVYKSTLEL 230
            E  V  +  ++
Sbjct: 231 MEMEVEVNENDV 242


>gi|197119644|ref|YP_002140071.1| RND family efflux pump membrane fusion protein [Geobacter
           bemidjiensis Bem]
 gi|197089004|gb|ACH40275.1| efflux pump, RND family, membrane fusion protein [Geobacter
           bemidjiensis Bem]
          Length = 333

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/319 (12%), Positives = 105/319 (32%), Gaps = 26/319 (8%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             LR   + E + +         +++       Q+            ++ +    +    
Sbjct: 32  AALRISGNIELTEVQLSFKTSGRVQERLVDEGMQVARGQVVARLEERELADALKLAQADE 91

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLL----RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                +       NR +   + + L     A  +    D    K LF +  + +   +  
Sbjct: 92  AASAASLAELEAGNRREEVAQGAALLARAEAQAAQVTADYDRSKALFAREVIPRQQFDAA 151

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +        E R ++ E++  L  + +      L+ A    E +             +++
Sbjct: 152 KAAFE----EARASVRERREALTLLRKGARPERLQAARAAHEGA-------------LAR 194

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           ++  ++     T+ +PI+G ++  +S           P++ +         +  +   ++
Sbjct: 195 VSTAKERLGYATLAAPISGVVLN-KSIEPGEQVAAGTPVVTLGDLKDCWL-KGYIPETEL 252

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             VK G  A V       +  K F+  +  I         ++QT++    ++    +  +
Sbjct: 253 ARVKLGQRARV--TA-DGLPGKAFEGRVSFISSQAEFTPKSVQTEKERVKLVYRVKITLA 309

Query: 400 DNNIELRNGFPAEVLFTAK 418
           +  +EL+ G PA+ +    
Sbjct: 310 NPGMELKPGMPADAVIDLG 328


>gi|91782993|ref|YP_558199.1| major facilitator superfamily efflux pump membrane fusion protein
           [Burkholderia xenovorans LB400]
 gi|91686947|gb|ABE30147.1| MFS efflux system, membrane fusion protein, EmrA subfamily
           [Burkholderia xenovorans LB400]
          Length = 413

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 87/273 (31%), Gaps = 32/273 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R ++ +    + + +  ++ LS  Q DL     + +  AVSQ
Sbjct: 101 RVALEQAEANLAQTVRQVRGLFADDNQYQAQVAQRQSDLSRAQDDLKRRLTVAQTGAVSQ 160

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     N    
Sbjct: 161 EE------------------ISHARDAVKSAQAAVDAAQQQLASNRALTANTTIANHPNV 202

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+     +  +  + +P+ G +   +S           PLM IVP     ++ A 
Sbjct: 203 QAAAAKVRDAYLSNARNNLPAPVTGYVAK-RSVQVGQRVSPGTPLMAIVPLGG-VWVDAN 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q++H++ G    +    Y       F   +              P  +   N ++ 
Sbjct: 261 FKEVQLKHMRIGQPVELTADVYGSSV--VFHGKVVGFSAGTGSAFSLLPAQNATGNWIKV 318

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   V + +       + + +     A+V   
Sbjct: 319 VQRLPVRIALDPKELEQHPLRIGLSMQADVTIK 351



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 35/99 (35%), Gaps = 4/99 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +     ++   +  G PL+  +  +    ++  + ++        
Sbjct: 60  VNGNVVQITPQVTGTVVAVNADDTQTVKAGDPLVVLDPADARVALEQAEANL----AQTV 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +   L   +N+Y       +S   +  D L +  +   
Sbjct: 116 RQVRGLFADDNQYQAQVAQRQSDLSRAQDDLKRRLTVAQ 154


>gi|326802221|ref|YP_004320040.1| secretion protein HlyD [Sphingobacterium sp. 21]
 gi|326552985|gb|ADZ81370.1| secretion protein HlyD family protein [Sphingobacterium sp. 21]
          Length = 348

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/368 (13%), Positives = 110/368 (29%), Gaps = 74/368 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E  +  + +   G I +   E   Q+ +G  LL  ++ E    +   +  +++    + 
Sbjct: 49  VESYINPVSARVGGFIDRVLFEEHQQVKRGDTLLVLDNREYLQKVKEAEALLEDTEAQL- 107

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                                                   V    I S   +  +   ++
Sbjct: 108 ---------------------------------------GVLAASIHSAKTATLVNKDQI 128

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +        E +    R LLS+    ++  + +  K  V ++D +     +  +  ++ 
Sbjct: 129 SAAKAKLWQQEQEVGRFRNLLSAEAVTVSDFEVVQTKYDVLKSDYSAANNSLKTNNSKVL 188

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E     K+++              A    E + DL                         
Sbjct: 189 ELEARYKSLIA-------------AKKRAEATLDL----------------ARLNLSYTV 219

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP  G     ++       Q  QPL+ +V       I A     Q+  +  G +  + 
Sbjct: 220 ITSPYTGF-TGRKALLEGQQIQPGQPLVSVVNSKLKWVI-ANFKETQVAAMFVGQSVKIE 277

Query: 352 FPHYADIRE-KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIE-LRNG 408
              + + R   + +AI        S    +  T  + ++I +I   +AF +   + L+ G
Sbjct: 278 ADAFPEKRFHGRIEAIAASTGSKFSLLPTDNSTGNFVKIIQRIPVKIAFEEGEADVLKAG 337

Query: 409 FPAEVLFT 416
              +V+  
Sbjct: 338 MNVKVIVK 345


>gi|284006676|emb|CBA71938.1| HlyD-family secretion protein [Arsenophonus nasoniae]
          Length = 323

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 59/396 (14%), Positives = 124/396 (31%), Gaps = 83/396 (20%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +R++ L ++ +I +    +L      +   GE+  +   V + S   G + +  +E G  
Sbjct: 3   RRISFLVLLMLIVIAIAVLLYTQNKHLLLQGEV--DAPEVIVTSKARGRVIERHIERGDM 60

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L+T E  E    +          +  +D                          
Sbjct: 61  VKKGQLLITLESPELQAQLAALSAVRDQAKAQLDL------------------------- 95

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                           N       R+++  L + +S Y N                    
Sbjct: 96  --------------SLNGTREETIRNVQAALKQAQSQYTN-----------------ANN 124

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +   + NL  K  VS N+L++  R    +  ++     +        N    E   ++A 
Sbjct: 125 EYIRLNNLSGKGYVSANELDKARRAKDVAFQQVNSAQAQLDEAK---NGDRIELRNKYAA 181

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L++  + + + Q    D +              + +P+ G +    +         + P
Sbjct: 182 ALRQTEQQMIELQVQVDDLL--------------VKAPVDGEVGPIPA-EVGELFNANSP 226

Query: 318 LMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFPHY-ADIREKKFKAIIEKIDPIIS 375
           L+ +V   +  +I    + + I  HV+KG   ++R P     I   + + I    D    
Sbjct: 227 LLTLVRLPQAYFI--YNSREDIMAHVRKGDKVSIRVPALQDKIITAEIRYIAPMGDYATK 284

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           +        +     +++  L   D    LR G  A
Sbjct: 285 RATRATGDFDLRTFEVRLYPLEPIDG---LRPGMSA 317


>gi|256426029|ref|YP_003126682.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
 gi|256040937|gb|ACU64481.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
          Length = 416

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 89/247 (36%), Gaps = 23/247 (9%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR--- 231
            +N+   + + SL ++  +  Q  L     L E  A  Q    Q +    K  LEL    
Sbjct: 100 LVNKRISDMQLSLEKSNSTVTQTALDTALTLRE--ARDQMTNLQFQMEQKKLALELSKYE 157

Query: 232 --ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               I + +  L+       +    +    ++ +  + Q +R   +    +  LE+ R +
Sbjct: 158 PPATIKQAEIDLQKAQRDLVQMKDNYKIKQQQAATKMVQAKREADEFGRIIGRLEELRSR 217

Query: 290 KTILSPIAGTIVYNQSFSSSN------YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
             I +P  G +VY   ++S          +   P + ++P       +  +    I  + 
Sbjct: 218 FVIKAPKNGLLVYISDWASGGKKKTGSVVRSWDPRVAMLPDLSSMLSKVYINEVDISKIH 277

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           +    T+    + +++    + +++ +  I   +     T + +EV +K+  +       
Sbjct: 278 QSQKVTMGLDAFPEVK---MEGVVKTVANI--GETRPGATAKVFEVNIKLNKVDSI---- 328

Query: 404 ELRNGFP 410
            L+ G  
Sbjct: 329 -LKPGMT 334



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 46/140 (32%), Gaps = 4/140 (2%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI--DTEKSALDFLNNKYDVLE 128
            V  GS + +G  + T +       I   ++S++     +      +AL     +  +  
Sbjct: 80  MVPEGSHVKEGDYIATLDPTLVNKRISDMQLSLEKSNSTVTQTALDTALTLREARDQMTN 139

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             F+  +++L   L KY              + ++ +  +    +  + +     K    
Sbjct: 140 LQFQMEQKKLALELSKYEP--PATIKQAEIDLQKAQRDLVQMKDNYKIKQQQAATKMVQA 197

Query: 189 RALLSSHQKDLTMMKNLFEK 208
           +       + +  ++ L  +
Sbjct: 198 KREADEFGRIIGRLEELRSR 217


>gi|306828483|ref|ZP_07461678.1| competence factor transporter ComB [Streptococcus mitis ATCC 6249]
 gi|304429282|gb|EFM32367.1| competence factor transporter ComB [Streptococcus mitis ATCC 6249]
          Length = 449

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 63/434 (14%), Positives = 140/434 (32%), Gaps = 26/434 (5%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R +     R+ L   + ++ L  +++    EIS+S+   +     +  I+S  +  I   
Sbjct: 14  RRYHNFSSRVILPMSLLLVFLFGFAVFAEKEISLSTRATVEPSRIIANIQSTSNQRIVAN 73

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            +E    + QG  L+ ++        +     ++ L+            L    D   +A
Sbjct: 74  YLEENKLVKQGELLVEYQQGAEAVQAEAYANQLEMLKDQKKQLGYLQSSLKEGSDQFPEA 133

Query: 131 FE-SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR------SIYLNRLDLEN 183
            +   +E   D+L +  S  S V     S   +++    ++               D + 
Sbjct: 134 DKFGYQEMFRDYLSQASSLKSNVSQQNASISSQNVAASQSQAEIGNLISQTQDKIRDYKT 193

Query: 184 KSSLLR--ALLSSHQKDLTMMKNLFEKN-----AVSQN--DLNQQERIVYKSTLELRENI 234
             S +   A L S     +  +    +      A SQ    ++ Q   +  S    R   
Sbjct: 194 AKSAIETGAQLDSQNAAYSFYQTYKNQGEEDPQAKSQVIAQVDAQITQLESSLATYRVQY 253

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                   +   L  +     + +L ++ ++L    +   +  S   +     ++  I +
Sbjct: 254 AGSGVQQAYATGLDSQLESLKSQHLVKVGQELTLLDQKILEAESGKKVQGGLLDKGKITA 313

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVR 351
              G +  N   S S    +   L ++ P       T + A +T K +  +K G +  VR
Sbjct: 314 SEDGVLHLNPETSDSTMVAEGTLLAQLYPSLEKEGKTKLTAYLTSKDVARLKVGDS--VR 371

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           F    D  ++    ++  I  I +      +   +    ++       +    LR G   
Sbjct: 372 FTTSKDGNKELV--LVSAITNIDATATKTEKGNFF---KIEAETSLTPEQAESLRYGSEG 426

Query: 412 EVLFTAKNTTLAQE 425
            +       +  + 
Sbjct: 427 RLTLITGKKSYLRY 440


>gi|301023583|ref|ZP_07187346.1| efflux pump membrane protein [Escherichia coli MS 69-1]
 gi|300396950|gb|EFJ80488.1| efflux pump membrane protein [Escherichia coli MS 69-1]
          Length = 351

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 57  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 116

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 117 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 158

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 159 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 216

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 217 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 274

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 275 RVPVEVSLDPKELMEHPLRIGLSMTATID 303


>gi|160943122|ref|ZP_02090359.1| hypothetical protein FAEPRAM212_00602 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445591|gb|EDP22594.1| hypothetical protein FAEPRAM212_00602 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104670|emb|CBL02214.1| RND family efflux transporter, MFP subunit [Faecalibacterium
           prausnitzii SL3/3]
          Length = 597

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 58/398 (14%), Positives = 130/398 (32%), Gaps = 41/398 (10%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  ++S +G +    N   +KS   G +     E G  + +GT L T +  + T  ++  
Sbjct: 75  VSNTLSGTGTLKPA-NTYSVKSLVPGKVLTGGFEEGDIVEEGTVLYTVDSSDATTKVEQA 133

Query: 100 KVSIKN-------------LRCHIDTEKSAL-----DFLNNKYDVLEKAFESREEQLLDF 141
            ++++              +R  +    S+L     D + +  +V      S+   +L+F
Sbjct: 134 AITLQQAQRSYDKTADHQYVRAEVAGVVSSLKVNKGDEVKSGQEVAVVRDSSKMNLVLEF 193

Query: 142 LGKYHS--TCSKVFNYGISSVYRSLKMKLTRMRSI-YLNRLDLENKSSLLRALLSSHQKD 198
                +  +  +     +   +  L   +T +     L+  +L  ++  L    +     
Sbjct: 194 PAADAANFSAGQTAQVTLDGTFEVLPGTITAVTGTDALSTGNLLTRTVTLSVSNAGGLTT 253

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
                     N VS       +    ++   L        N+    +   D+  L  +  
Sbjct: 254 AQAATATI--NGVSSIAAANFQYQAERTLTALASGTVTAINVREGGSVNKDDIILTLSG- 310

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            +E++  ++    T       +  ++   +  TI SPI+GTI+   +    +       L
Sbjct: 311 -EELTESIQSASETLRGAELSMQNMQDAMDNYTITSPISGTIIEKNA-KVGDALSTGSDL 368

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             I        +   V   Q+  +K G +  V      D      + ++ ++      + 
Sbjct: 369 CTIY-DLSYLEMTINVDELQVSSLKVGQSVQVTADAVKDKTY---EGLVTRVS----MKG 420

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +       Y V ++I +         LR G  A     
Sbjct: 421 DTSGGTTTYPVTVRIDETD------GLRPGMNANAEIV 452


>gi|299532156|ref|ZP_07045550.1| secretion protein HlyD [Comamonas testosteroni S44]
 gi|298719818|gb|EFI60781.1| secretion protein HlyD [Comamonas testosteroni S44]
          Length = 426

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/375 (10%), Positives = 95/375 (25%), Gaps = 79/375 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I     G +     ++   +  G  L+  +  +         V +      + 
Sbjct: 63  VAGNVVQITPQVGGTVISIGADDTDYVRAGQLLVQLDPADY-------LVQLAQAESQLA 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                   L      L      RE  LL                                
Sbjct: 116 QTARQTRTLYANNAPLAAQVAQREADLL-------------------------------- 143

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                           L+A  +    D+   + L    AV + + +  + +   +   + 
Sbjct: 144 ---------------RLKADAAKANDDVARRRPLTATGAVGKEEFDHAKALATAAGNAVA 188

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 +     +     +     A           ++        +K+       ++  
Sbjct: 189 AAEAAVRAAKAQLTAAEAQTKGTTA-----------EDFPAVMAAAAKVREAYLALQRTR 237

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           +++P+ G +                PL+ +V      ++ A     Q+  ++ G    + 
Sbjct: 238 LIAPVDGFVAKRGV-QLGQRVAAGSPLLTVV-DLHKLWVDANFKESQLADLRMGQKVELT 295

Query: 352 FPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
              Y D     ++  +  +          + +Q       +    V ++I+    +    
Sbjct: 296 ADVYGDKTT--YEGKVVGLGAGTGAAFALLPAQNATGNWIKVVQRVPVRISLEPEALKQH 353

Query: 404 ELRNG--FPAEVLFT 416
            LR G    A+V   
Sbjct: 354 PLRVGLSMDAKVDIR 368


>gi|239927556|ref|ZP_04684509.1| hypothetical protein SghaA1_04984 [Streptomyces ghanaensis ATCC
           14672]
 gi|291435900|ref|ZP_06575290.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291338795|gb|EFE65751.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 1629

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 79/200 (39%), Gaps = 6/200 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L D  + +    R   +  +SA + L +      +A +   +   D   +     S++
Sbjct: 444 RGLADAVQQAADRQRSAAEQVRSAEESLADAQRTARQAQQDLTQARADAARQLEDLESRL 503

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            N  +S     L ++    R I +    +  +     RA L+  Q     ++ L ++ A 
Sbjct: 504 ANASLSERDAVLAVQEAHTRLIRMREAGESASYVEQQRAQLAYDQ----AVQRLADQRAE 559

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++  L+ +++   K+ +E  + + + +  LR   +   +   + A   ++ +R   Q+QR
Sbjct: 560 TK-RLSAEKKKADKAGVEGSDLVLDAQERLRQAEQGVAKGQQQLAKAREDAARQAVQSQR 618

Query: 272 TFADEMSKLTILEKTREQKT 291
             A+   ++   ++   +  
Sbjct: 619 DIAEAQQRVAEAQRNVTRTQ 638


>gi|209963619|ref|YP_002296534.1| efflux transporter, RND family, MFP subunit, putative
           [Rhodospirillum centenum SW]
 gi|209957085|gb|ACI97721.1| efflux transporter, RND family, MFP subunit, putative
           [Rhodospirillum centenum SW]
          Length = 361

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 61/214 (28%), Gaps = 27/214 (12%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R+      E+   + E +  +    +  D           E+SR +E  + +     ++ 
Sbjct: 95  RLALLDQAEVSAQLREAEAAVTRARQDLDRLEPLLEKGFVELSR-IETARTSLQAAKARR 153

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
             +   R    I +P  G ++               P++ +        +R  +  + I 
Sbjct: 154 DAVAFNRSLSEITAPADGVVLSRPV-EPGEIVPAGAPVLILGDRGSGLIVRVGLADRDIG 212

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ-----------QDNNLQTQEYYEV 389
            +  G  A V          +   A +++I    S                 +      V
Sbjct: 213 RIAPGNAAEVLLD------GRTLPATVDRIAAKSSPGTGVFDVELALDPAPERLSSGRIV 266

Query: 390 ILKITDLAFSDNNIELRN--------GFPAEVLF 415
            ++I  +A +D  +            G  A V  
Sbjct: 267 GVRIAPVAGADAGLLAIPSSAILEGFGMEATVYV 300



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 29/74 (39%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I    V+    + +GT L   +  E +  +   + ++   R  +D  +  L+    +
Sbjct: 76  SGRIAAISVDVADSVRKGTRLALLDQAEVSAQLREAEAAVTRARQDLDRLEPLLEKGFVE 135

Query: 124 YDVLEKAFESREEQ 137
              +E A  S +  
Sbjct: 136 LSRIETARTSLQAA 149


>gi|198277626|ref|ZP_03210157.1| hypothetical protein BACPLE_03849 [Bacteroides plebeius DSM 17135]
 gi|198269323|gb|EDY93593.1| hypothetical protein BACPLE_03849 [Bacteroides plebeius DSM 17135]
          Length = 416

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/355 (13%), Positives = 108/355 (30%), Gaps = 91/355 (25%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEI-----SVSSSGE----ILNEDNVV-- 57
            K++ P     + +L ++G I     +  L ++      +  + G+    I     V   
Sbjct: 12  QKKHLPYIGGGVVILLLLGWIIFGNHASTLKVDGKSLNIADVTYGKFNDYIRVNGQVQPI 71

Query: 58  -EIK--SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             ++      GI+++  VE G+ + +G  +L   +                         
Sbjct: 72  SVVQLSPEEGGIVQEKVVEEGAHVKKGDVILRLSNSNLD--------------------- 110

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
             L  LN + ++ EK    R  Q+                                   +
Sbjct: 111 --LQILNAESELAEKQNLLRNTQVT----------------------------------M 134

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
             ++L+ E +   L       Q+     + L+++  +S+ +  Q            +E+ 
Sbjct: 135 QQDKLNNETEKVQLDIDTRRKQRTFQQYQRLYKERLISREEYLQA-----------KEDY 183

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              +   + I E   + ++     + ++  +L+  ++       +   LE       + +
Sbjct: 184 EVAQKKHKLITERLVQDSIYRNIQMDQMEDNLQNMRKNVLLIRERKDKLE-------VRA 236

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            I G  +              Q + +I   S    I A +    I  V  G  AT
Sbjct: 237 TIDGE-LGLLDAELGQNITAGQMVGQINDLSD-FKIEAMIDEHYIDRVTNGLPAT 289


>gi|264680515|ref|YP_003280425.1| efflux transporter RND family, MFP subunit [Comamonas testosteroni
           CNB-2]
 gi|262211031|gb|ACY35129.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           CNB-2]
          Length = 450

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 75/250 (30%), Gaps = 7/250 (2%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +  +E LL    +              ++  S+      +R        +  + + +   
Sbjct: 103 DDEDEGLLKLDAERARAAGVALAEAGPALIASMLQLPGEIRFNEDRTAHVVPRVAGVAES 162

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           ++++   +     L            + E +  +  L L    ++++  L       ++ 
Sbjct: 163 VAANLGQVVKKGQLLATLTSPAVSEQRSELMAAQKRLALARTTYQREKQLWQEKISAEQD 222

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            L+    L+E        Q+  A   +  +       +  + +P  G +V     S    
Sbjct: 223 YLQAQQALREAEIASANAQQKLAAIGA-GSGSAGALNRFELRAPFDGVVVEKHL-SVGEA 280

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q S  +  I    +  +   KV    +  V+ G  ATV    +           +  + 
Sbjct: 281 VQDSTAVFTIS-DLRSVWAEMKVAASDLPFVRVGEKATVHATAFESKAT----GTVAYVG 335

Query: 372 PIISQQDNNL 381
            +I Q+    
Sbjct: 336 ALIGQETRTA 345


>gi|260893817|ref|YP_003239914.1| efflux transporter, RND family, MFP subunit [Ammonifex degensii
           KC4]
 gi|260865958|gb|ACX53064.1| efflux transporter, RND family, MFP subunit [Ammonifex degensii
           KC4]
          Length = 429

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 59/410 (14%), Positives = 141/410 (34%), Gaps = 89/410 (21%)

Query: 20  MTLLSIIGIIGLITWSIL----LPIEIS----------VSSSGEILNEDNVVEIKSPFSG 65
           + +L   G++    W  L     P++++          V ++G++  E+ + ++ SP + 
Sbjct: 11  LAVLLGAGVVVAAVWRGLHPPGTPVKVALAEERTFEDKVLATGKVEPEEEI-DVTSPIAA 69

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + +  V  G ++  G  L   +  +  D +                 KSA   L     
Sbjct: 70  KLLRLAVREGDRVKAGQLLAELDTGDLEDKV-----------------KSAQAALAVAEA 112

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            L    ++R E +             +                                 
Sbjct: 113 ELLALRQARPEDIAQAEAAVREAEESLEEA------------------------------ 142

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              RA+  + QK L   + L  + AVS  +L   E    ++  ++R      ++    + 
Sbjct: 143 ---RAVADTAQKKLERYRFLRNQGAVSVAELEAVEAEAARAQAQVRAAEARLESARARLQ 199

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L +    + A     +      NQ   A E ++  + +       I +P  G ++    
Sbjct: 200 ALKNPDPQKIAVQEARV------NQARVALEEARCQLAKGK-----ITAPADGVVLQIGP 248

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
               ++ Q    ++K+   +++  + A+++ + +  +K G    V +  Y     K++ A
Sbjct: 249 R-EGDFLQPGAFILKLGDVNRVRVV-AELSEQDLAGIKAGQRGVVTWSAYP---GKEWSA 303

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           ++E++ P+++++      +  ++V L+            L  G   +V  
Sbjct: 304 VVERLSPMVTRKSE-QGAETIFKVYLRPEKEG-------LLPGARVDVSI 345


>gi|170746916|ref|YP_001753176.1| RND family efflux transporter MFP subunit [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653438|gb|ACB22493.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           radiotolerans JCM 2831]
          Length = 351

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/212 (10%), Positives = 61/212 (28%), Gaps = 17/212 (8%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA-NYLKEISRDLEQNQRTFADEMS 278
           E  V  +  E++    + +              +  +    ++ +   +  + +     +
Sbjct: 114 EVAVTSADAEVKNREADLQVKNAQSARRQALTTVSTSIEEKQQFAGAAKIAEASLESAQA 173

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +L   +   E+  + S + G +         +YA+     + ++  +   +I       +
Sbjct: 174 QLRQAKVNLERTQVKSTVNGRVTNLLMR-VGDYARTGTSNISVI-DTDSFWIDGYFEETK 231

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI--ISQQDNNLQTQEYYE-------- 388
           + ++  G  A V+   +         +I   I      +           Y         
Sbjct: 232 MPNIHVGDRADVKLMGFDPHLTGTVHSITLGISTANAAASTQGLPDVNPVYTWVRLAQRV 291

Query: 389 -VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            V ++I  +      + L  G  A V      
Sbjct: 292 PVRIRIDHV---PAGVPLIAGMTATVFVNGGR 320



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 43/131 (32%), Gaps = 12/131 (9%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +     V  I    +G I + +V++   + +G  L   + ++    +      +KN 
Sbjct: 70  DGTVRV--QVANIAPQVAGQIVEVRVQDNQTVRKGDVLYVIDPVDFEVAVTSADAEVKNR 127

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              +  + +     + +   L     S EE       +  +  +K+    + S    L+ 
Sbjct: 128 EADLQVKNAQ----SARRQALTTVSTSIEE------KQQFAGAAKIAEASLESAQAQLRQ 177

Query: 167 KLTRMRSIYLN 177
               +    + 
Sbjct: 178 AKVNLERTQVK 188


>gi|152979788|ref|YP_001352813.1| multidrug resistance protein A, emrA [Janthinobacterium sp.
           Marseille]
 gi|151279865|gb|ABR88275.1| multidrug resistance protein A, emrA [Janthinobacterium sp.
           Marseille]
          Length = 399

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 88/304 (28%), Gaps = 32/304 (10%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + +L++                +      L   +  +R++++N   L    +   
Sbjct: 73  AIHADDTELVEAGKPLVDLDHSDAKVALDQAEAQLAQTVREVRTLFVNNGALGAAVTQRV 132

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A ++  + DL   + L    AV++ DL      +  +   L+    +  +     +    
Sbjct: 133 ADVARARDDLARRQELSGTGAVAKEDLEHARTTLIAAESALQAARDQLTSNQALTDGTT- 191

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                                       +++        + T+L+PI G I   +S    
Sbjct: 192 -----------------VAQHPNVQRAAAQVQAAYLALSRNTLLAPITGYIAK-RSVQVG 233

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  PL+ +VP +   ++ A     Q+  ++ G    +    Y      K+   +  
Sbjct: 234 QRVAPGTPLLSVVPLN-ALWVDANFKEVQVAKMRIGQPVELYSDVYGSGV--KYHGKVAG 290

Query: 370 IDPIISQQDNNLQTQ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +          L TQ          +   V + +      +  + +      EV      
Sbjct: 291 LSAGTGAAFALLPTQNASGNWIKVVQRIPVRITLDPKELEERPLRVGLSMQVEVDVAKSE 350

Query: 420 TTLA 423
            T  
Sbjct: 351 GTSL 354



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 37/130 (28%), Gaps = 5/130 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV++     G +     ++   +  G PL+  +  +    +D  +  +      + 
Sbjct: 56  VAGNVVQVTPQVGGTVIAIHADDTELVEAGKPLVDLDHSDAKVALDQAEAQLAQTVREVR 115

Query: 112 TE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           T                 DV     +    Q L   G       +     + +   +L+ 
Sbjct: 116 TLFVNNGALGAAVTQRVADVARARDDLARRQELSGTGAVAKEDLEHARTTLIAAESALQA 175

Query: 167 KLTRMRSIYL 176
              ++ S   
Sbjct: 176 ARDQLTSNQA 185


>gi|149178690|ref|ZP_01857274.1| Secretion protein HlyD [Planctomyces maris DSM 8797]
 gi|148842465|gb|EDL56844.1| Secretion protein HlyD [Planctomyces maris DSM 8797]
          Length = 400

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 101/297 (34%), Gaps = 45/297 (15%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI-YLNRLDLENKSS 186
           EK  E R   + +            +N  I S+   +  ++     I  LN  +L+   S
Sbjct: 49  EKTLEKRITLVGNLEAGSQVEIRSKYNGYIKSIPFDVGERIKANDVILELNDTELQELVS 108

Query: 187 LLRALLSSHQKDLTMM---KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
              A L+  +  L      + L +K       L   ++    +  E+ E +         
Sbjct: 109 KAAASLTVAKAQLKAQVTGQELAQKAY---ERLLVLQKSGVSTQQEMEEALA-------- 157

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                          ++E   +LE+ +   A+  S L       ++  +L+P  G  +  
Sbjct: 158 ------------NKAIQEAQTELEEARVEQAE--SDLEQSRLRLQENKVLAPTDGF-LAE 202

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +     + A+   PLMKIV    +  I   +  K  + VK G  A +    +     K F
Sbjct: 203 RMVDVGDLAKPDVPLMKIVNLDHVRTI-VHIVEKDYEDVKLGQKALITVDTFP---GKTF 258

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              +++  P++  Q           V ++I      + +  L+ G  A V    ++ 
Sbjct: 259 SGQVKRKAPVLDPQTRTAA------VHIEIP-----NADFSLKPGMHARVQIVFEHR 304



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 65/177 (36%), Gaps = 13/177 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E  ++  G +     V EI+S ++G IK    + G +I     +L   D E  +L+   
Sbjct: 52  LEKRITLVGNLEAGSQV-EIRSKYNGYIKSIPFDVGERIKANDVILELNDTELQELVSKA 110

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             S+   +  +  + +  +     Y           E+LL       ST  ++     + 
Sbjct: 111 AASLTVAKAQLKAQVTGQELAQKAY-----------ERLLVLQKSGVSTQQEMEEALANK 159

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
             +  + +L   R +     DLE     L+        D  + + + +   +++ D+
Sbjct: 160 AIQEAQTELEEAR-VEQAESDLEQSRLRLQENKVLAPTDGFLAERMVDVGDLAKPDV 215


>gi|90581494|ref|ZP_01237288.1| membrane-fusion protein [Vibrio angustum S14]
 gi|90437355|gb|EAS62552.1| membrane-fusion protein [Vibrio angustum S14]
          Length = 367

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 75/208 (36%), Gaps = 21/208 (10%)

Query: 207 EKNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEI--- 262
               +S+      +R+     L  +  N+               EA  +    L      
Sbjct: 75  ASGVISKIAFESGQRVKAGQELVSINSNVEVSSLQSTKAQLPAVEATYKRYQDLFRKGSV 134

Query: 263 -SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               L++ +  +   +S++  LE++ +++ I++P  G +   ++     Y Q    ++++
Sbjct: 135 SKSSLDEAKANYFALVSQIKSLEESIQRRDIVAPFDGEV-GLRNVYLGQYIQPGTQIVRL 193

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
              ++    R  V    I  +K G T  +    Y D     FK  I  I+P ++ Q   +
Sbjct: 194 -EDTRTMRFRFTVPQTDISKIKIGQTVDINVDAYQDT---DFKGQITAIEPAVNAQTGLI 249

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGF 409
           Q Q               ++  +LR+G 
Sbjct: 250 QVQ-----------ADIPNSGGKLRSGM 266



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 90/305 (29%), Gaps = 26/305 (8%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           ++ + G I     V  + S  SG+I K   E+G ++  G  L++         +   K  
Sbjct: 56  AIQAIGFIEPVQGV-TLTSEASGVISKIAFESGQRVKAGQELVSINSNVEVSSLQSTKAQ 114

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +  +       +      +     L++A  +    +        S   +           
Sbjct: 115 LPAVEATYKRYQDLFRKGSVSKSSLDEAKANYFALVSQIKSLEESIQRRDIVAPFDGEVG 174

Query: 163 SLKMKLTRMRSIYLNRLDLENKS-------------------SLLRALLSSHQK-DLTMM 202
              + L +        + LE+                       +   + ++Q  D    
Sbjct: 175 LRNVYLGQYIQPGTQIVRLEDTRTMRFRFTVPQTDISKIKIGQTVDINVDAYQDTDFKGQ 234

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFA-NYLK 260
               E    +Q  L Q +  +  S  +LR  +    + +L  I++               
Sbjct: 235 ITAIEPAVNAQTGLIQVQADIPNSGGKLRSGMFARARVILPTISDQIIVPQTAITYTLYG 294

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           +    L++         + +T  +    +  ILS   G     Q  ++      ++ L+ 
Sbjct: 295 DTIYVLKEVDGKLRAIQTVVTTGQNHGNKVRILS---GIKAGEQIVTTGQIRLSNKTLVH 351

Query: 321 IVPHS 325
           +V + 
Sbjct: 352 VVEND 356


>gi|28869363|ref|NP_791982.1| RND family efflux transporter MFP subunit [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28852604|gb|AAO55677.1| efflux transporter, RND family, MFP subunit [Pseudomonas syringae
           pv. tomato str. DC3000]
 gi|331018636|gb|EGH98692.1| efflux transporter, RND family, MFP subunit [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 390

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+       +  L +  +I +  W IL                IE SV++ G +    
Sbjct: 1   MKRSRYPRRALLVALCLFPVIAVCAWQILPDGTGTVSTVTVTRGTIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  SG I K   + G Q+ +G  L+  +       +D  + +I NL+  +  ++
Sbjct: 61  YV-DVGSQASGQILKIHAQVGDQVKEGDLLVEIDPSTQKAKLDAARYAIDNLKAQLQEQR 119

Query: 115 SALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    K      L     +R E +     ++ +T ++V  F   I     +L+    
Sbjct: 120 ALHELAEQKQQRQKSLAAGGATRAEDVQAAQSEFRATQARVDMFKAQILEAQAALRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 AL 181



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 10/212 (4%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKSLAAGGATRAEDVQAAQSEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIYAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWNSTVRQILPVPPRPLDQANQGGGSPSSSRKSGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            V+L    L   +++  L     A++ F A  
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTAQIFFVAGK 321


>gi|17546012|ref|NP_519414.1| multidrug resistance A (translocase) transmembrane protein
           [Ralstonia solanacearum GMI1000]
 gi|17428307|emb|CAD14995.1| probable multidrug resistance a (translocase) transmembrane protein
           [Ralstonia solanacearum GMI1000]
          Length = 428

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/295 (11%), Positives = 89/295 (30%), Gaps = 28/295 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + QL+                 +     +L   + ++R++Y N     +  ++  
Sbjct: 85  AIRADDTQLVTAGQPLIELDRADARVALEQAEAALAQAVRQVRTLYSNTGAYTSTLAMRE 144

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L+  ++DL   K +    AVSQ ++   +  +  +   +     + +       +   
Sbjct: 145 SDLAKAKEDLARRKQIAGTGAVSQEEIAHAQTSLQAAEAAVETAREQLQANRVLTEQTTL 204

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +        ++                          + ++ + + G +   +S    
Sbjct: 205 ERHPNVLQAAAKVRE------------------AYLAYARTSLPASVTGYVAK-RSVQVG 245

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--------K 361
                  PLM IVP     ++ A     Q++H++ G    +    Y              
Sbjct: 246 QRVAPGTPLMAIVPLD-QLWVDANFKEVQVRHMRVGQPVELVADVYGSSVTYHGKVVGFS 304

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                   + P  +   N ++  +   V + +      D+ + +     A V   
Sbjct: 305 AGTGSAFSLLPAQNATGNWIKVVQRLPVRVSLDPKELKDHPLRVGLSMEARVDIH 359



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 63/182 (34%), Gaps = 10/182 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + NVV++    +G +   + ++   +  G PL+  +  +    ++  + ++      + 
Sbjct: 68  VQGNVVQVTPQVAGTVVAIRADDTQLVTAGQPLIELDRADARVALEQAEAALAQAVRQVR 127

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           T  S      +   + E      +E L     +    +   +   +  +S+  +     T
Sbjct: 128 TLYSNTGAYTSTLAMRESDLAKAKEDLARRKQIAGTGAVSQEEIAHAQTSLQAAEAAVET 187

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
               +  NR+      LE   ++L+A     +  L   +          V++  +   +R
Sbjct: 188 AREQLQANRVLTEQTTLERHPNVLQAAAKVREAYLAYARTSLPASVTGYVAKRSVQVGQR 247

Query: 222 IV 223
           + 
Sbjct: 248 VA 249


>gi|222149818|ref|YP_002550775.1| multidrug resistance efflux pump [Agrobacterium vitis S4]
 gi|221736800|gb|ACM37763.1| multidrug resistance efflux pump [Agrobacterium vitis S4]
          Length = 391

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 75/264 (28%), Gaps = 14/264 (5%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +L    +++ +  L    +E +     A L   +      +       +S   +      
Sbjct: 125 ALDQAKSQLATQKLTVERIEAQVQGGEAALQQSKAQQASAEATLRTAQLSFKRVTDLRAQ 184

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              S  EL            +++          ++    +     + Q     E + +  
Sbjct: 185 SVMSQSELDTATSTLAVAQANVDAAVAAVASSVSSIAV-LKAQKAEAQAGVLTEETVVAK 243

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            ++  +   + +P  G I         +    S+ L  +VP     YI A     Q+  +
Sbjct: 244 AQRDLDFTVLRAPYDGVIGNLGV-QVGDLVSSSKRLASLVPIG-RLYIDANFKETQLSGI 301

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKIT 394
             G    V    Y +     F+  +  I          + ++      T+    V ++I 
Sbjct: 302 VPGSKVRVHVDAYDEH---AFEGRVVSIAAGSGSVFSMLPAENATGNFTKVIQRVPVRIA 358

Query: 395 DLAFSDNNIELRNGFPAEVLFTAK 418
                 +   LR G    V    +
Sbjct: 359 IPQEILDKGYLRAGLSVVVDIDTR 382



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 84/228 (36%), Gaps = 30/228 (13%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNE-------DNVVEIKSP 62
           +RN    +  + +L+  G  G   W           + G  +          ++  I   
Sbjct: 44  RRNFALPVIALAVLAGAGYYGYNYW-----------TEGRFMISTDDAYIGGDIAVITPK 92

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G ++   V +   + +G  + T +D +        ++++   +  + T+K  ++ +  
Sbjct: 93  VTGYVQSVSVTDNDHVKKGDVIATLDDGDY-------RIALDQAKSQLATQKLTVERIEA 145

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +    E A +  + Q         +  +++    ++ +     M  + + +       L 
Sbjct: 146 QVQGGEAALQQSKAQQASAEATLRT--AQLSFKRVTDLRAQSVMSQSELDTATST---LA 200

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
              + + A +++    ++ +  L  + A +Q  +  +E +V K+  +L
Sbjct: 201 VAQANVDAAVAAVASSVSSIAVLKAQKAEAQAGVLTEETVVAKAQRDL 248


>gi|162455507|ref|YP_001617875.1| hypothetical protein sce7226 [Sorangium cellulosum 'So ce 56']
 gi|161166089|emb|CAN97394.1| hypothetical protein sce7226 [Sorangium cellulosum 'So ce 56']
          Length = 484

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 72/202 (35%), Gaps = 18/202 (8%)

Query: 223 VYKSTLELRENIHEQKNMLRHINELY-DEANLEFANYLKEIS-RDLEQNQRTFADEMSKL 280
           V +S   L       +   + + E    +A+L+ A    +++  DL  ++   A   + L
Sbjct: 195 VVRSEASLGTAKQRLERARKMVAEGVGSQADLDTAQGAYDVALADLAASKAQVAQLRAVL 254

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVPHSKLTYIRAKVTPK 337
                  +   I SPI G ++  ++            +  L  I    +   + A +   
Sbjct: 255 RSSTTNLQYTRIFSPIDGVVIS-RAIDPGQTVAASFQAPTLFVIAQDLRKMRVLADIDEA 313

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  +++G TA V    +       F+  + ++      Q   +     Y  ++++    
Sbjct: 314 DVGRLREGMTADVSVDAFPGET---FRGTVSQVRYSPLSQSGVVT----YAAVVEVD--- 363

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             + +++LR G  A V   +  
Sbjct: 364 --NPDVKLRPGMTATVSVRSAE 383



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 71/239 (29%), Gaps = 36/239 (15%)

Query: 15  ASLKRMTLLSIIG--IIGLITWS----------------ILLPIEISVSSSGEILNEDNV 56
             L R+ +L+ I   + G++ W                     +   V S+G++     V
Sbjct: 83  RWLARLGVLATIAALVAGIVVWRIRTRPPPPPRYVTGDITTGDVLEVVQSTGQVKPLTEV 142

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID--------------LKKVS 102
             I +  SG I K  V+  S +  G  L   +       ID                + S
Sbjct: 143 Q-IGAQVSGRITKVYVDFNSIVKAGDVLAEIDPTLFGAQIDSNQAQIAAANASVVRSEAS 201

Query: 103 IKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +   +  ++  +  +          D  + A++     L     +     + + +   + 
Sbjct: 202 LGTAKQRLERARKMVAEGVGSQADLDTAQGAYDVALADLAASKAQVAQLRAVLRSSTTNL 261

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            Y  +   +  +             +S     L    +DL  M+ L + +      L +
Sbjct: 262 QYTRIFSPIDGVVISRAIDPGQTVAASFQAPTLFVIAQDLRKMRVLADIDEADVGRLRE 320


>gi|116252116|ref|YP_767954.1| transmembrane efflux protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115256764|emb|CAK07854.1| putative transmembrane efflux protein [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 430

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 82/225 (36%), Gaps = 18/225 (8%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD-EANLEFAN 257
           L     L      S+  LN  +  V K+  +++      + +   +      + +L+ A+
Sbjct: 122 LLDTNKLEADVKSSRAKLNSAKANVVKANADMQSAGTSLERLKSLVRSNVSTQQSLDDAS 181

Query: 258 YLKEISRDLEQ-NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS- 315
           Y  + +   +Q N+       + L + E    +  I+SPI G I+             S 
Sbjct: 182 YKYDSAVAAKQINEAEVLASEADLQLAEVNLAKAKIISPIDGVILTRSVN-PGATVAASL 240

Query: 316 -QPLM-KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             P++  I    K   ++  V    +  +  G  A      Y D       A IE+I   
Sbjct: 241 SAPILFTIAGDLKKMELQVDVDEADVGQIAVGQKAKFTVDAYPDRTFP---AEIEQI-RF 296

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            S+  NN+ T   Y+ +L +      + ++ LR G  A    T +
Sbjct: 297 ASEVVNNVVT---YKAVLSVD-----NADLLLRPGMTATADVTVE 333



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 81/234 (34%), Gaps = 11/234 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + V+++G +   + V +I S  SG ++   V+  S +  G  L   +  +   
Sbjct: 72  AKRGDLTVLVTATGSVQPTEQV-DISSELSGTVRDVNVDYNSTVKSGEVLALLDTNKLEA 130

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE---KAFESREEQLLDFLGKYHSTCSK 151
            +   +  + + + ++    + +       + L+   ++  S ++ L D   KY S  + 
Sbjct: 131 DVKSSRAKLNSAKANVVKANADMQSAGTSLERLKSLVRSNVSTQQSLDDASYKYDSAVAA 190

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                   +     ++L  +       +   +   L R++        ++   +      
Sbjct: 191 KQINEAEVLASEADLQLAEVNLAKAKIISPIDGVILTRSVNPGATVAASLSAPIL---FT 247

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLKEI 262
              DL + E  V     ++   I   +     ++   D    A +E   +  E+
Sbjct: 248 IAGDLKKMELQVDVDEADV-GQIAVGQKAKFTVDAYPDRTFPAEIEQIRFASEV 300


>gi|300928532|ref|ZP_07144057.1| efflux pump membrane protein [Escherichia coli MS 187-1]
 gi|300463463|gb|EFK26956.1| efflux pump membrane protein [Escherichia coli MS 187-1]
          Length = 351

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 57  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 116

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 117 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 158

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 159 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 216

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 217 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 274

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 275 RVPVEVSLDPKELMEHPLRIGLSMTATID 303


>gi|270265370|ref|ZP_06193631.1| efflux pump membrane protein [Serratia odorifera 4Rx13]
 gi|270040774|gb|EFA13877.1| efflux pump membrane protein [Serratia odorifera 4Rx13]
          Length = 390

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 90/256 (35%), Gaps = 22/256 (8%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS------TLELR 231
              LE   + L   +    + +   K      A+ ++DL++ E  + +           R
Sbjct: 98  EQALERAKTSLANSVRQTHQLIINSKQYQANIALRKSDLSKAENDLKRRVVLGSVDAIGR 157

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E +   ++ +       + A  ++      +     + Q       +++       ++  
Sbjct: 158 EELQHARDAVDSAKAALEVAVQQYNANQAMVLDTPLEKQPAIQQSAAQMRDAWLALQRTK 217

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I+SPI G +   +S           PLM +VP  +  ++ A     QI +++ G +ATV 
Sbjct: 218 IISPITGYVSR-RSVQVGAQIAAGSPLMAVVPA-EHIWVDANFKETQIANMRIGQSATVV 275

Query: 352 FPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDN 401
              Y D     +   +  ID          P  +   N ++  +   V +++     +D+
Sbjct: 276 SDIYGDDV--VYTGKVVGIDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDAKQIADH 333

Query: 402 NIELRNGFPAEVLFTA 417
            + +  G   +V    
Sbjct: 334 PLRI--GLSTQVKVDT 347



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 61/160 (38%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-- 109
              N V+I +  +G +     +N   + QG  LLT +  +    ++  K S+ N      
Sbjct: 57  VSGNQVQIMAQVNGSVNSVNFDNTDYVRQGDVLLTLDPTDAEQALERAKTSLANSVRQTH 116

Query: 110 ---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              I++++   +    K D+ +   + +   +L  +        +     + S   +L++
Sbjct: 117 QLIINSKQYQANIALRKSDLSKAENDLKRRVVLGSVDAIGREELQHARDAVDSAKAALEV 176

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
            + +  +     LD  LE + ++ ++        L + + 
Sbjct: 177 AVQQYNANQAMVLDTPLEKQPAIQQSAAQMRDAWLALQRT 216


>gi|104781857|ref|YP_608355.1| HlyD family multidrug efflux protein [Pseudomonas entomophila L48]
 gi|95110844|emb|CAK15559.1| putative multidrug resistance efflux pump, partial with no TM
           helices (HlyD family) [Pseudomonas entomophila L48]
          Length = 251

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 78/251 (31%), Gaps = 31/251 (12%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
                 +   +     + DL   + L    +VS++DL                +I    N
Sbjct: 16  QQRAAIADNESQAQKSRADLQRNEALIRDGSVSRSDL----------------DITRAAN 59

Query: 240 MLRHINELYDEANLEFA-NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                     +A LE A   L+ +  + +  + +  +  + L +     +   + +P  G
Sbjct: 60  SRATAALAQAKAALEIARQDLQTVIVNRDSLEASVENAKATLELARIDLDNTRVTAPRDG 119

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +          Y      LM +VP     ++ A +   Q+  V+ G   T        +
Sbjct: 120 QLGQIGVR-LGAYVNSGAQLMALVP--DTVWVIANMKETQMDKVRIGQPVTFTVDALDHL 176

Query: 359 REKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFP 410
           +       +++I P    +      +  T  + ++     ++++          LR G  
Sbjct: 177 K---LHGHVQRISPATGSEFALLQADNATGNFVKIAQRIPVRVSVDPDQPQAQRLRPGMS 233

Query: 411 AEVLFTAKNTT 421
             V    +  T
Sbjct: 234 VVVSIDTRVVT 244


>gi|91228322|ref|ZP_01262251.1| hypothetical protein V12G01_21718 [Vibrio alginolyticus 12G01]
 gi|91188138|gb|EAS74441.1| hypothetical protein V12G01_21718 [Vibrio alginolyticus 12G01]
          Length = 371

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 60/183 (32%), Gaps = 18/183 (9%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +   +  + E    A     +   +        Q    D  + L+ ++       + +P 
Sbjct: 122 RAQAMLLVKEKEFNAAKSLKSRGLQGEVAFATAQAALVDARANLSNVQTALRNTEVKAPF 181

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G IV +      ++     P+  ++       I A V+ + IQ++K+G  A VR     
Sbjct: 182 DG-IVDHHFVELGDFVGIGDPIATVI-DLDTLVIEADVSERHIQYLKEGLEADVR----- 234

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            I ++  +  +  I  + S   N               ++   + +  +  G  AEV   
Sbjct: 235 TINQQHHQGRVRYIGRVSSASTNTF-----------PIEIEIDNQDARIPAGMSAEVQLP 283

Query: 417 AKN 419
              
Sbjct: 284 LSE 286



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    ++ G  + QG  +   +       + ++    + +    + E +A   L ++ 
Sbjct: 89  GKIVSLNIKKGQAVKQGQVIANID----KRDLGIQLKRAQAMLLVKEKEFNAAKSLKSRG 144

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
              E AF + +  L+D      +  + + N  + + +  +
Sbjct: 145 LQGEVAFATAQAALVDARANLSNVQTALRNTEVKAPFDGI 184


>gi|85714936|ref|ZP_01045921.1| hypothetical protein NB311A_11207 [Nitrobacter sp. Nb-311A]
 gi|85698133|gb|EAQ36005.1| hypothetical protein NB311A_11207 [Nitrobacter sp. Nb-311A]
          Length = 341

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 60/181 (33%), Gaps = 17/181 (9%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             L        +   +        S+  ++ +   A   +++    +      +++P+ G
Sbjct: 102 RALEEFQHREFDRQTQLLARGATTSQTYQRVESELARVRAQIAAQAQRLNYYKLVAPMDG 161

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +     +       L +I    K  ++ A+V  + I  V+ G  A +R   +A+ 
Sbjct: 162 IVLR-EDGEVGDMVDPGTVLYRIG-LEKPLWVVAEVNEEDIPRVRVGQKALLRTDAFANH 219

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                   +++I P              + + + + D      +  L+ G   E    ++
Sbjct: 220 ---VLPGFVKQITPAGDPAAKT------FRIRIGLPD------DTPLQVGMSVEANIVSR 264

Query: 419 N 419
            
Sbjct: 265 E 265



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 16/144 (11%)

Query: 20  MTLLSIIGIIGLITWSILLPI-----------EISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + +  +IG+     W    P               V ++G +  E           G I 
Sbjct: 12  IIVAIVIGLSAAAWWWWRGPAITVVAVTRGTAAEIVYATGAVEPETWSRS-APLVRGHIV 70

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +     G  + +G  L   +D E    ++     ++ L      E      L  +     
Sbjct: 71  ERCRCEGKTVKKGDLLARLDDKEAIATLN----DLRALEEFQHREFDRQTQLLARGATTS 126

Query: 129 KAFESREEQLLDFLGKYHSTCSKV 152
           + ++  E +L     +  +   ++
Sbjct: 127 QTYQRVESELARVRAQIAAQAQRL 150


>gi|325292466|ref|YP_004278330.1| HlyD family secretion protein [Agrobacterium sp. H13-3]
 gi|325060319|gb|ADY64010.1| HlyD family secretion protein [Agrobacterium sp. H13-3]
          Length = 355

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 83/286 (29%), Gaps = 29/286 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     + +          + +   +L     +  +   N    E      +A L   Q 
Sbjct: 77  LAKIDDRIYRQKQAQAGAALDTQKAALDNSRQQENAANANIRSSEAAVDSAQASLKQAQL 136

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                 NL +  A + +     +   + +  + R ++ + K  L    +      +  ++
Sbjct: 137 ASDRQDNLIKSGAGTSS----LQEEAHAALEKARASLSQAKAALEVSRQDLQTIIVNRSS 192

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                       Q   A+  + + +     +   I +P+ G +      +   Y      
Sbjct: 193 L-----------QAAVANAEAAVELARIDLDNTEIHAPVDGRLGEIGVRT-GQYVTAGTQ 240

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM +VPH       A     Q+  ++ G   T+        +       +E+  P    +
Sbjct: 241 LMAVVPHDVWVI--ANFKETQLAGMQVGQPVTISVDALHRRK---LNGRVERFSPATGSE 295

Query: 378 ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLF 415
                 +  T  + ++     ++I   A      +L  G    V  
Sbjct: 296 FAVIKPDNATGNFVKIAQRLGVRIAIDADQPLAADLSPGMSVVVHV 341



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 88/264 (33%), Gaps = 5/264 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           + +     +  + LL  +  + L+ ++  L P   +V  +        V  +    SG +
Sbjct: 1   MLKKIFTPVSILVLLGGLAGVALVLYAWRLPPFLSTVEMTDNAFVRGYVTTMSPQVSGYV 60

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V++  ++ QGT L   +D            ++   +  +D  +   +  N      
Sbjct: 61  VDVPVKDYQEVKQGTLLAKIDDRIYRQKQAQAGAALDTQKAALDNSRQQENAANANIRSS 120

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFN-YGISSVYRSLKMKLTRMR-SIYLNRLDLENKS 185
           E A +S +  L           + + +  G SS+       L + R S+   +  LE   
Sbjct: 121 EAAVDSAQASLKQAQLASDRQDNLIKSGAGTSSLQEEAHAALEKARASLSQAKAALEVSR 180

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE--RIVYKSTLELRENIHEQKNMLRH 243
             L+ ++ +       + N      +++ DL+  E    V     E+     +       
Sbjct: 181 QDLQTIIVNRSSLQAAVANAEAAVELARIDLDNTEIHAPVDGRLGEIGVRTGQYVTAGTQ 240

Query: 244 INELYDEANLEFANYLKEISRDLE 267
           +  +        AN+ +     ++
Sbjct: 241 LMAVVPHDVWVIANFKETQLAGMQ 264


>gi|21231780|ref|NP_637697.1| transport protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66768094|ref|YP_242856.1| transport protein [Xanthomonas campestris pv. campestris str. 8004]
 gi|21113489|gb|AAM41621.1| transport protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66573426|gb|AAY48836.1| transport protein [Xanthomonas campestris pv. campestris str. 8004]
          Length = 399

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 87/292 (29%), Gaps = 28/292 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + LL    + +    +     I++    +      + +   + +    + +   A L   
Sbjct: 106 QPLLQIDDRTYQATLQQAEAAIAAREADIAAATANVAAQESSLVQARTQVASAAASLRFA 165

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q ++     L    A +       +  + ++  +      + K     I           
Sbjct: 166 QAEVKRFAPLAASGADTHEHQESLQHDLERARAQYEAAQAQAKGAQSQIQAS-------- 217

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                  S  LEQ +       +         E   + S I G +  +++     +    
Sbjct: 218 -------SAQLEQAKAGVKQATADADQARVAVEDTRLTSRIHGRV-GDKTVQVGQFLAAG 269

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
              M IVP   L  + A     Q+  ++ G  A +     + ++       +E + P   
Sbjct: 270 TRTMTIVPQQSLYLV-ANFKETQVGLMRPGQPAEIEVDALSGVK---LHGKVESLSPGTG 325

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            Q         T  + +V+    ++I  LA  +    L  G   EV    ++
Sbjct: 326 SQFALLPPENATGNFTKVVQRVPVRIRVLAGEEARKVLVPGMSVEVTVDTRS 377


>gi|331704082|gb|AED89996.1| hypothetical protein [Pseudomonas sp. SHC52]
          Length = 294

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 80/217 (36%), Gaps = 19/217 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + ++     ++       E R    ++   L+  N+L D    E  +     +RDL   +
Sbjct: 68  IDRSAYLLAQQQRTAELAEARSVFEQRSAQLKRRNQLGDAIAREEID---NAARDLAVAR 124

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  S+L       ++ TI SP+ G +   +     +YA   +  + +V  S   ++
Sbjct: 125 ARLDAAQSQLAQARLDLDRTTIRSPVDGYVTQLRL-QPGDYASTGETNIFVV-DSHSFWV 182

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ------ 384
                  ++  ++ G TA+++   ++ + E    ++   I     Q+ NN   Q      
Sbjct: 183 TGYFEETKLAGIRVGATASIKLMGFSPLLEGHVASMGRGIADGNEQRGNNGLPQVAPTFS 242

Query: 385 -----EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                +   V +++  +     ++EL  G  A V   
Sbjct: 243 WIRLAQRVPVRIELDQI---PPDVELAAGMTASVEVV 276



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 35/108 (32%), Gaps = 1/108 (0%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+ I    SG +++  V +   + +G  L   +          +   +   R   +
Sbjct: 33  VSAHVIRIAPEVSGQVEQLLVGDNQWVAKGDLLYQIDRSAYLLAQQQRTAELAEARSVFE 92

Query: 112 TEKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTCSKVFNYGIS 158
              + L   N   D + +   ++    L     +  +  S++    + 
Sbjct: 93  QRSAQLKRRNQLGDAIAREEIDNAARDLAVARARLDAAQSQLAQARLD 140


>gi|288935477|ref|YP_003439536.1| secretion protein HlyD [Klebsiella variicola At-22]
 gi|288890186|gb|ADC58504.1| secretion protein HlyD family protein [Klebsiella variicola At-22]
          Length = 392

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 87/271 (32%), Gaps = 32/271 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + ++R +Y    +   + +  +  L + + D    + +    A++  D
Sbjct: 97  ALQQAEANLASTVRQVRGLYSTADNYRAQVAAKKVALQTAKSDYLRREKIVSSGAIAVED 156

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      V  +  +L       K     +++   + + E    +  + +    N      
Sbjct: 157 LAHYRDAVTSAQSDLLAAEQALKTNQAMVDDTVVDNHPEVKTAVATLRQRYLDN------ 210

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        + TI++P++G +   ++            L+ IVP ++  ++ A   
Sbjct: 211 ------------SRSTIVAPVSGYVAK-RAVQLGMRVTSGTTLLAIVPLNE-VWVDANFK 256

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQ-----E 385
             Q+Q+++ G    +    Y D    K+   IE +              N         +
Sbjct: 257 ESQMQNMRIGQKVELNADLYGDNV--KYHGTIESLGIGTGSAFSLLPAQNASGNWIKIVQ 314

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V + +       + + +     AEV   
Sbjct: 315 RLPVRITLDPHDMQKHPLRVGLSMNAEVDIR 345



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK------- 104
              N V +    +G + +  V+ G  + +G PL+  +  +T   +   + ++        
Sbjct: 54  VNGNQVTLTPQITGTVTQVTVDEGDYVEKGQPLVLLDPSDTAIALQQAEANLASTVRQVR 113

Query: 105 -------NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                  N R  +  +K AL    + Y   EK   S    + D L  Y    +   +  +
Sbjct: 114 GLYSTADNYRAQVAAKKVALQTAKSDYLRREKIVSSGAIAVED-LAHYRDAVTSAQSDLL 172

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           ++       +     ++  N  +++   + LR   
Sbjct: 173 AAEQALKTNQAMVDDTVVDNHPEVKTAVATLRQRY 207


>gi|167034776|ref|YP_001670007.1| RND family efflux transporter MFP subunit [Pseudomonas putida GB-1]
 gi|166861264|gb|ABY99671.1| efflux transporter, RND family, MFP subunit [Pseudomonas putida
           GB-1]
          Length = 407

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 3/140 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE SV++ G +     V ++ +  SG I K  VE G  + +G  L+  +       +D
Sbjct: 62  ADIESSVTALGTLQPRRYV-DVGAQASGQIHKLHVEVGDSVRKGQLLVEIDPSTQQARLD 120

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + SI NL+  +  +++   +L  +  +  +   +      D   +  +   KV    I
Sbjct: 121 AGRFSIDNLKAQLAEQRAQ--YLLAQQQLKRQRDLAAAGATRDEDVQTAAAQLKVTQARI 178

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
                 ++     +RS    
Sbjct: 179 DMFLAQIRQAQASLRSDEAE 198



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 85/310 (27%), Gaps = 59/310 (19%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q    + K H         G   V      +  R+ +   +  +L+ + +  RA     
Sbjct: 84  AQASGQIHKLHVEVGDSVRKGQLLVEIDPSTQQARLDAGRFSIDNLKAQLAEQRAQYLLA 143

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+ L   ++L    A    D+      +  +   +   + + +     +     E     
Sbjct: 144 QQQLKRQRDLAAAGATRDEDVQTAAAQLKVTQARIDMFLAQIRQAQASLRSDEAE----- 198

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                               I +P+ GT+V   +          
Sbjct: 199 -------------------------------LGYTRIYAPMDGTVVAVDAR-EGQTLNAQ 226

Query: 316 Q--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           Q  PL+  +       + A+V+   I  VK G TA          R       +  I P 
Sbjct: 227 QQTPLILRIAKLSPMTVWAQVSEADIGKVKPGMTAYFTTLAGGKRRWTSTVRQVLPIPPK 286

Query: 374 ISQQDNNLQTQEY-------------YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +Q +                    Y V+L +      + +  L      +V F A   
Sbjct: 287 PLEQASQGGGSPASVSNGSAGSQVVQYSVLLDVD-----NPDGALMAEMTTQVFFVAG-- 339

Query: 421 TLAQEIIHPI 430
           T +Q +  P+
Sbjct: 340 TASQVLTVPL 349


>gi|134301727|ref|YP_001121695.1| efflux pump protein [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|254369084|ref|ZP_04985096.1| HlyD family secretion protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|134049504|gb|ABO46575.1| efflux pump protein [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|157122034|gb|EDO66174.1| HlyD family secretion protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 340

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 64/206 (31%), Gaps = 13/206 (6%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL- 230
           +   L      +K    +  L+  Q+ +    N+ + N             +    ++L 
Sbjct: 95  KDYQLKVAQANSKIIQTKGQLAIAQEQV----NVAKSNLTKAQSSLDTATSMADRYIKLY 150

Query: 231 RENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +++    ++  ++IN+       +   Y  LK+    +E  +                  
Sbjct: 151 KDDAGSLQDAQKYINQKIQAQKAKDEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLG 210

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             T+++P  G +   + +         Q L   +  +K  +I A      +  +K G   
Sbjct: 211 YTTLIAPDDGYVSNLKLY-KGQLVSPGQALFGFI-DNKKWWIDANFKETDLDRIKPGQKV 268

Query: 349 TVRFPHYADIREKKFKAIIEKIDPII 374
            +    Y+      +   ++ I    
Sbjct: 269 EIELDMYSHS----YAGKVDSISYAT 290



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 56/185 (30%), Gaps = 10/185 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
              +++ I     G I+K  + N   + +   L+  +         +    I   K  + 
Sbjct: 57  VNADIISISPKVGGYIEKVYIHNNQFVHKDDKLVQIDPKDYQLKVAQANSKIIQTKGQLA 116

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +  ++  KS L    +  D    +   R  +L            K  N  I +  ++ 
Sbjct: 117 IAQEQVNVAKSNLTKAQSSLDT-ATSMADRYIKLYKDDAGSLQDAQKYINQKIQA-QKAK 174

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIV 223
               + ++   L     + +    +    +   +L     +  +   VS   L + + + 
Sbjct: 175 DEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLGYTTLIAPDDGYVSNLKLYKGQLVS 234

Query: 224 YKSTL 228
               L
Sbjct: 235 PGQAL 239


>gi|89256076|ref|YP_513438.1| HlyD family secretion protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115314552|ref|YP_763275.1| multidrug resistance efflux pump [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156502093|ref|YP_001428158.1| HlyD family secretion protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167009799|ref|ZP_02274730.1| HlyD family secretion protein [Francisella tularensis subsp.
           holarctica FSC200]
 gi|254367409|ref|ZP_04983435.1| hlyD family secretion protein [Francisella tularensis subsp.
           holarctica 257]
 gi|290954537|ref|ZP_06559158.1| HlyD family secretion protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295312053|ref|ZP_06802868.1| HlyD family secretion protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89143907|emb|CAJ79126.1| HlyD family secretion protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129451|gb|ABI82638.1| probable multidrug resistance efflux pump [Francisella tularensis
           subsp. holarctica OSU18]
 gi|134253225|gb|EBA52319.1| hlyD family secretion protein [Francisella tularensis subsp.
           holarctica 257]
 gi|156252696|gb|ABU61202.1| putative secretion protein, HlyD family [Francisella tularensis
           subsp. holarctica FTNF002-00]
          Length = 340

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 64/206 (31%), Gaps = 13/206 (6%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL- 230
           +   L      +K    +  L+  Q+ +    N+ + N             +    ++L 
Sbjct: 95  KDYQLKVAQANSKIIQTKGQLAIAQEQV----NVAKSNLTKAQSSLDTATSMADRYIKLY 150

Query: 231 RENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +++    ++  ++IN+       +   Y  LK+    +E  +                  
Sbjct: 151 KDDAGSLQDAQKYINQKIQAQKAKDEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLG 210

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             T+++P  G +   + +         Q L   +  +K  +I A      +  +K G   
Sbjct: 211 YTTLIAPDDGYVSNLKLY-KGQLVSPGQALFGFI-DNKKWWIDANFKETDLDRIKPGQKV 268

Query: 349 TVRFPHYADIREKKFKAIIEKIDPII 374
            +    Y+      +   ++ I    
Sbjct: 269 EIELDMYSHS----YAGKVDSISYAT 290



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 56/185 (30%), Gaps = 10/185 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
              +++ I     G I+K  + N   + +   L+  +         +    I   K  + 
Sbjct: 57  VNADIISISPKVGGYIEKVYIHNNQFVHKDDKLIQIDPKDYQLKVAQANSKIIQTKGQLA 116

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +  ++  KS L    +  D    +   R  +L            K  N  I +  ++ 
Sbjct: 117 IAQEQVNVAKSNLTKAQSSLDT-ATSMADRYIKLYKDDAGSLQDAQKYINQKIQA-QKAK 174

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIV 223
               + ++   L     + +    +    +   +L     +  +   VS   L + + + 
Sbjct: 175 DEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLGYTTLIAPDDGYVSNLKLYKGQLVS 234

Query: 224 YKSTL 228
               L
Sbjct: 235 PGQAL 239


>gi|300918471|ref|ZP_07135066.1| efflux pump membrane protein [Escherichia coli MS 115-1]
 gi|300948491|ref|ZP_07162588.1| efflux pump membrane protein [Escherichia coli MS 116-1]
 gi|300956367|ref|ZP_07168661.1| efflux pump membrane protein [Escherichia coli MS 175-1]
 gi|301647538|ref|ZP_07247338.1| efflux pump membrane protein [Escherichia coli MS 146-1]
 gi|312973384|ref|ZP_07787556.1| multidrug resistance protein K [Escherichia coli 1827-70]
 gi|1060876|dbj|BAA11236.1| EmrK [Escherichia coli]
 gi|300316818|gb|EFJ66602.1| efflux pump membrane protein [Escherichia coli MS 175-1]
 gi|300414354|gb|EFJ97664.1| efflux pump membrane protein [Escherichia coli MS 115-1]
 gi|300452000|gb|EFK15620.1| efflux pump membrane protein [Escherichia coli MS 116-1]
 gi|301074334|gb|EFK89140.1| efflux pump membrane protein [Escherichia coli MS 146-1]
 gi|310331979|gb|EFP99214.1| multidrug resistance protein K [Escherichia coli 1827-70]
 gi|315615622|gb|EFU96254.1| multidrug resistance protein K [Escherichia coli 3431]
          Length = 351

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 57  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 116

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 117 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 158

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 159 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 216

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 217 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 274

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 275 RVPVEVSLDPKELMEHPLRIGLSMTATID 303


>gi|153003114|ref|YP_001377439.1| RND family efflux transporter MFP subunit [Anaeromyxobacter sp.
           Fw109-5]
 gi|152026687|gb|ABS24455.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter sp.
           Fw109-5]
          Length = 397

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 64/192 (33%), Gaps = 17/192 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            +   I  +S +   +N  +             EA    A   ++     E  +   AD 
Sbjct: 103 LRDALIAARSGVSAAKNTLQVAEANAKRARTLAEAGAFAAQQAEQAEAAHEGARAQLADA 162

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            ++L   E+   +  + +P +G +   Q  S  +      PL  ++         A V  
Sbjct: 163 RARLVQAEQQVSKARVRAPFSGVVSERQV-SVGDVVAPGAPLFTVI-DPTRLQFEASVPA 220

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
            Q+  V+ G         +     + F+  IE+++P +             +V + +   
Sbjct: 221 AQVGLVRPGARVDFTVTGFD----RVFEGAIERVNPAVDPATG--------QVRVYVD-- 266

Query: 397 AFSDNNIELRNG 408
              + N +L +G
Sbjct: 267 -VKNENGQLISG 277



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 35/116 (30%), Gaps = 10/116 (8%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
            G + +   E G ++  G  L   +D    D +   +  +   +  +   ++        
Sbjct: 75  GGTVLEVLAEAGERVKPGQLLARVDDTALRDALIAARSGVSAAKNTLQVAEANAKRARTL 134

Query: 123 ---------KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                    + +  E A E    QL D   +      +V    + + +  +  +  
Sbjct: 135 AEAGAFAAQQAEQAEAAHEGARAQLADARARLVQAEQQVSKARVRAPFSGVVSERQ 190


>gi|187926463|ref|YP_001892808.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii
           12J]
 gi|241665950|ref|YP_002984309.1| efflux transporter RND family, MFP subunit [Ralstonia pickettii
           12D]
 gi|187728217|gb|ACD29381.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii
           12J]
 gi|240867977|gb|ACS65637.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii
           12D]
          Length = 382

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 62/191 (32%), Gaps = 22/191 (11%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF------ADEMSKLTILEKTR 287
           I  QK  L  +N           +  ++    ++              +++++       
Sbjct: 133 ISAQKEYLLALNTARQLKGSNMKDLQEDADATVQSAAGRLHVLGMSDADVAQIAKRGTPA 192

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           E  T+ +PI+GTIV  ++     +       M IV  +++ +    V    I  V+ G  
Sbjct: 193 EHLTLRAPISGTIVK-RNMDPGAFLNVGDSFMSIV-DTRVLWFTGNVYENDIASVRIGQP 250

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            ++    Y D    +F   +  I P I    + L       V   +      +N+  LR 
Sbjct: 251 ISLHTSAYPDR---EFTGRVSFIAPNIDPATHTLT------VRCDVP-----NNDGLLRP 296

Query: 408 GFPAEVLFTAK 418
              A       
Sbjct: 297 EMYATARIQTG 307


>gi|254881984|ref|ZP_05254694.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319641009|ref|ZP_07995716.1| ABC transport system [Bacteroides sp. 3_1_40A]
 gi|254834777|gb|EET15086.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317387387|gb|EFV68259.1| ABC transport system [Bacteroides sp. 3_1_40A]
          Length = 298

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 96/273 (35%), Gaps = 29/273 (10%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q     G+      +V       +Y      L   ++I     D+  + +  +  +   +
Sbjct: 49  QFNIEEGQLLKAGEEVGCIDTLQLYLKKMQLLASGKAIASKSTDINKQIAATKEQIGKAE 108

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +    +NL ++NA +Q  ++  +  +     +L   I   +     I E      ++ A
Sbjct: 109 YERKRTENLLKENAATQKQIDDIDSQIAVLKKQLEAQISTLQRGNASITEESSAYEIQVA 168

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                     L+    +  I SPI GT++  +   +   A Q +
Sbjct: 169 Q-------------------------LDDQLRKCHITSPICGTVLA-KYAEAGELATQGK 202

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           PL K V   +  ++RA +T  Q+  +K G    V F        ++++  I  I      
Sbjct: 203 PLFK-VADVQHLFLRAYITADQLSQLKLGDKVKV-FSDLGKDDRREYEGTITWISDKSEF 260

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
               +QT++    ++  T +A  ++   ++ G 
Sbjct: 261 TPKTIQTRDERANLVYATKIAVKNDGY-IKIGM 292


>gi|213970446|ref|ZP_03398574.1| efflux transporter, RND family, MFP subunit [Pseudomonas syringae
           pv. tomato T1]
 gi|301385862|ref|ZP_07234280.1| efflux transporter, RND family, MFP subunit [Pseudomonas syringae
           pv. tomato Max13]
 gi|302059249|ref|ZP_07250790.1| efflux transporter, RND family, MFP subunit [Pseudomonas syringae
           pv. tomato K40]
 gi|302130091|ref|ZP_07256081.1| efflux transporter, RND family, MFP subunit [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213924764|gb|EEB58331.1| efflux transporter, RND family, MFP subunit [Pseudomonas syringae
           pv. tomato T1]
          Length = 390

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 70/182 (38%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+       +  L +  +I +  W IL                IE SV++ G +    
Sbjct: 1   MKRSRYPRRALLVALCLFPVIAVCAWQILPDGTGTVSTVTVTRGTIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  SG I K   + G Q+ +G  L+  +       +D  + +I NL+  +  ++
Sbjct: 61  YV-DVGSQASGQILKIHAQVGDQVKEGDLLVEIDPSTQKAKLDAARYAIDNLKAQLQEQR 119

Query: 115 SALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    K      L     +R E +     ++ +T ++V  F   I     +L+    
Sbjct: 120 ALHELAEQKQQRQKSLAAGGATRAEDVQAAQSEFRATQARVDMFKAQILEAQAALRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 AL 181



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 10/212 (4%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKSLAAGGATRAEDVQAAQSEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIYAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK G TA        + R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPGMTAYFTTLSGGNRRWNSTVRQILPVPPRPLDQANQGGGSPSSSRKSGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            V+L    L   +++  L     A++ F A  
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTAQIFFVAGK 321


>gi|294011588|ref|YP_003545048.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292674918|dbj|BAI96436.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 504

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 54/184 (29%), Gaps = 16/184 (8%)

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              E +   A+Y      +L   Q       ++L+  +       I+SP+ G ++  +  
Sbjct: 164 ARTELDAARADY-SSALANLRSAQAQVRVSQAQLSTAQTNLSIAQIVSPVTGVVLS-RDI 221

Query: 307 SSSNYAQQ---SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                      +  L  I        +   V    +  VK+G +A      +        
Sbjct: 222 EPGQTVAASLNAPVLFTIAEDLTQMEVEVSVDEADVGQVKEGQSANFSVDAFPGRTFP-- 279

Query: 364 KAIIEKI--------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            A + ++            S   ++  +     V+     L+  + +  LR G  A    
Sbjct: 280 -ARVTRVNVGSNSASASSSSSSGSSAASSTTGTVVAYTAVLSVDNKDEILRPGMTATADI 338

Query: 416 TAKN 419
             + 
Sbjct: 339 VTQE 342



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 55/157 (35%), Gaps = 14/157 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + +SVS++G +   + V ++ S  SG I    V+   ++ +G  L   +     D I+  
Sbjct: 65  LTVSVSATGNLKPINQV-DVGSEQSGKITAVHVDVNDRVTRGQKLAELDTRRLVDTINQN 123

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  + + +  +   ++         D        R+  +    G      ++     + +
Sbjct: 124 RAQLASSQAGVAQAEAQAALAKATLD--------RQLNVFKLSGGRVPARTE-----LDA 170

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                   L  +RS        + + S  +  LS  Q
Sbjct: 171 ARADYSSALANLRSAQAQVRVSQAQLSTAQTNLSIAQ 207


>gi|269966933|ref|ZP_06181005.1| hypothetical protein VMC_24350 [Vibrio alginolyticus 40B]
 gi|269828416|gb|EEZ82678.1| hypothetical protein VMC_24350 [Vibrio alginolyticus 40B]
          Length = 371

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 60/183 (32%), Gaps = 18/183 (9%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +   +  + E    A     +   +        Q    D  + L+ ++       + +P 
Sbjct: 122 RAQAMLLVKEKEFNAAKSLKSRGLQGEVAFATAQAALVDARANLSNVQTALRNTEVKAPF 181

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G IV +      ++     P+  ++       I A V+ + IQ++K+G  A VR     
Sbjct: 182 DG-IVDHHFVELGDFVGIGDPIATVI-DLDTLVIEADVSERHIQYLKEGLEADVR----- 234

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            I ++  +  +  I  + S   N               ++   + +  +  G  AEV   
Sbjct: 235 TINQQHHQGRVRYIGRVSSASTNTF-----------PIEIEIDNQDARIPAGMSAEVQLP 283

Query: 417 AKN 419
              
Sbjct: 284 LSE 286



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    ++ G  + QG  +   +       + ++    + +    + E +A   L ++ 
Sbjct: 89  GKIVSLNIKKGQAVKQGQVIANID----KRDLGIQLKRAQAMLLVKEKEFNAAKSLKSRG 144

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
              E AF + +  L+D      +  + + N  + + +  +
Sbjct: 145 LQGEVAFATAQAALVDARANLSNVQTALRNTEVKAPFDGI 184


>gi|262368875|ref|ZP_06062204.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
 gi|262316553|gb|EEY97591.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
          Length = 386

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 93/284 (32%), Gaps = 29/284 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+      +         G+     +L  +   +     + +  E K    RA     
Sbjct: 113 QVLMHIDATTYDQKVTQAEAGVDQAQNNLSNQTQNIAQRKADIIAAEAKVEQARAAYQLS 172

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q      + L +  A S+++ ++       +   L++            N L  +  L+ 
Sbjct: 173 QAQQQRYQQLRDTGAASKSEQDKAFADTQNNLALLQQ---------AQANVLVAKEALKT 223

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A   +   +          +  ++L   + T+   +I++P+ G  +   +     Y    
Sbjct: 224 AQVAETGLK------AQVTNAAAQLDQAQTTKNYSSIIAPMDGQ-LGEVNPRVGQYVAAG 276

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ ++P     ++ A     QI ++K G  A          +   F   +E+I P   
Sbjct: 277 TQLLYLIPQQT--WVTANFKETQIANMKIGQKAWFTVDALNHQK---FTGHVEQISPAAG 331

Query: 376 QQ----DNNLQTQEYYEVILKIT-DLAFSDNNI---ELRNGFPA 411
            +      +  T  + +V+ +I   +A   N      LR G   
Sbjct: 332 SEFSVLKADNATGNFTKVVQRIAVRIAIDPNQTGIENLRPGMSV 375



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/240 (11%), Positives = 79/240 (32%), Gaps = 6/240 (2%)

Query: 14  PASLKRMTLLSIIGIIGLIT--WSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           P + + + L+ ++ IIG+    W+  + P + +V S+     +     + S  +G +K  
Sbjct: 42  PTAKRTLILMFLVLIIGIGIILWAWKIGPFDSTVESTDNSYVKGKTTVLSSQINGYVKDV 101

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V +   + +G  L+  +       +   +  +   + ++  +   +     K D++   
Sbjct: 102 LVSDFDHVKKGQVLMHIDATTYDQKVTQAEAGVDQAQNNLSNQTQNIA--QRKADIIAAE 159

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +  + +    L +      +      ++            ++        +    + + 
Sbjct: 160 AKVEQARAAYQLSQAQQQRYQQLRDTGAASKSEQDKAFADTQNNLALLQQAQANVLVAKE 219

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L + Q   T +K     NA +Q D  Q  +        +   + E    +        +
Sbjct: 220 ALKTAQVAETGLKAQV-TNAAAQLDQAQTTKNYSSIIAPMDGQLGEVNPRVGQYVAAGTQ 278


>gi|255526638|ref|ZP_05393544.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|255509671|gb|EET86005.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
          Length = 370

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 83/258 (32%), Gaps = 42/258 (16%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               I S          ++ S   +    +   +  +  L S +++   MK L+++ A +
Sbjct: 67  IRNSIKSSEAQAAAAQAQLNSSESSANSSQIGINKQQTNLESAERNYDRMKALYDQGAET 126

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + DL   E  +  +  +L+      ++     +                   +++++Q  
Sbjct: 127 KVDLENAETQLKNAQTDLQTARANAESSSLSADAQ---------------RANIQKSQTD 171

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
              +   L       +   I +P++G +      +   Y      + K+     ++ I A
Sbjct: 172 LNTQRESL-------QNTIITAPVSGVVSGKNI-TVGQYISPGTVIGKV---ENISSINA 220

Query: 333 KVTPKQIQ--HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            +  K     +VK G     +              +I+ ID     Q         ++  
Sbjct: 221 VIEVKDSDLSYVKLGTKTKFKLSSEDSKEY---DGVIKNIDGAADPQSRT------FKCK 271

Query: 391 LKITDLAFSDNNIELRNG 408
           ++I      + + +L+ G
Sbjct: 272 IQID-----NKDGKLKPG 284



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 52/154 (33%), Gaps = 2/154 (1%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I +   G + +   ENG  +  G  L+  +D +  + I   +      +  +++ +S+ 
Sbjct: 33  TISNKVGGKVTQVSFENGQSVSAGQALVKLDDTDIRNSIKSSEAQAAAAQAQLNSSESSA 92

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +      +  +   ES E         Y        +  + +    LK   T +++   N
Sbjct: 93  NSSQIGINKQQTNLESAERNYDRMKALYDQGAETKVD--LENAETQLKNAQTDLQTARAN 150

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +   RA +   Q DL   +   +   +
Sbjct: 151 AESSSLSADAQRANIQKSQTDLNTQRESLQNTII 184


>gi|261855395|ref|YP_003262678.1| efflux transporter RND family, MFP subunit [Halothiobacillus
           neapolitanus c2]
 gi|261835864|gb|ACX95631.1| efflux transporter, RND family, MFP subunit [Halothiobacillus
           neapolitanus c2]
          Length = 428

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 65/212 (30%), Gaps = 18/212 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            ++  + Q E  V +S  +L    + QK     +    +    +          DL    
Sbjct: 133 AARAKVQQAEATVQESKTQLARLKNVQKMSGGKVPSKLEFDKAQAT--YNRAKADLASAW 190

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHS-KL 327
            +     +          +  + SPI G ++             S   P++  +      
Sbjct: 191 ASVVQSEAVQNANRTDLSKTVVRSPINGIVLNRNV-EPGQTIAASFQAPVLFTLAEDLTQ 249

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++  V    +  V  G  A      + D     F A + ++    SQ  + + T   Y
Sbjct: 250 MELQVDVDEADVGQVHVGQPARFTVDAFPDRN---FDAKVTQV-RYGSQTVSGVVT---Y 302

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + ILK+      + ++ LR G  A        
Sbjct: 303 KTILKVD-----NRDLLLRPGMTATAHILVNE 329



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 49/138 (35%), Gaps = 3/138 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+++G +   + V ++    SG IK+  V+   ++  G PL   +  +    +     ++
Sbjct: 73  VTATGTLAPTNQV-DVGIEVSGTIKEVLVDYNDKVKVGQPLALLDPTKLEAQLRQSTAAL 131

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              R  +   ++ +     +   L+   +    ++   L          +N   + +  +
Sbjct: 132 DAARAKVQQAEATVQESKTQLARLKNVQKMSGGKVPSKLE--FDKAQATYNRAKADLASA 189

Query: 164 LKMKLTRMRSIYLNRLDL 181
               +        NR DL
Sbjct: 190 WASVVQSEAVQNANRTDL 207


>gi|254362078|ref|ZP_04978202.1| possible Acr family acridine efflux pump AcrA [Mannheimia
           haemolytica PHL213]
 gi|261493829|ref|ZP_05990343.1| putative Acr family acridine efflux pump AcrA [Mannheimia
           haemolytica serotype A2 str. BOVINE]
 gi|261495054|ref|ZP_05991521.1| putative Acr family acridine efflux pump AcrA [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|153093636|gb|EDN74598.1| possible Acr family acridine efflux pump AcrA [Mannheimia
           haemolytica PHL213]
 gi|261309296|gb|EEY10532.1| putative Acr family acridine efflux pump AcrA [Mannheimia
           haemolytica serotype A2 str. OVINE]
 gi|261310532|gb|EEY11721.1| putative Acr family acridine efflux pump AcrA [Mannheimia
           haemolytica serotype A2 str. BOVINE]
          Length = 387

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 82/225 (36%), Gaps = 27/225 (12%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQR 271
           N L+  +  +     +L       +    + N L     AN    N L+     L   + 
Sbjct: 97  NTLSTAQARLSSYKAQLTSAQVALEVAQSNYNRLNKLYRANSASLNDLETAKNTLASAKA 156

Query: 272 TFADEMSKLTILE-------KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           T  +  ++L   E              I+SP+ G IV     S       +Q    IV  
Sbjct: 157 TVDNIKAQLKSAEISVNDAKTNLTYTQIISPMDGVIVSVPV-SVGQTVNSNQTSPTIVQV 215

Query: 325 SK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           +      I+ +++   I  VK G    V+F   A+   +++ A I+ +DP ++   +N  
Sbjct: 216 ADLSKMLIKLEISEGDIAQVKVGQK--VKFSTLAEPN-REYSATIDSVDPALTTLTDNNY 272

Query: 383 TQE-------YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           T++       YY   + + +   +DN++ +  G   +   T    
Sbjct: 273 TEQSGNTEAVYYYANVSVDN---ADNSLRI--GMTTQAQITIDKR 312



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 1/113 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  +V ++G +   +   E+ +  SG I+K  VE G  + QG  +   +    ++ + 
Sbjct: 42  AEINKNVLATGSVRA-NKRTEVGAQVSGKIQKLYVELGQSVKQGDLIADIDSSNQSNTLS 100

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             +  + + +  + + + AL+   + Y+ L K + +    L D     ++  S
Sbjct: 101 TAQARLSSYKAQLTSAQVALEVAQSNYNRLNKLYRANSASLNDLETAKNTLAS 153


>gi|110833109|ref|YP_691968.1| ABC transporter membrane protein [Alcanivorax borkumensis SK2]
 gi|110646220|emb|CAL15696.1| ABC export system, membrane fusion protein [Alcanivorax borkumensis
           SK2]
          Length = 428

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 68/197 (34%), Gaps = 25/197 (12%)

Query: 2   HHFMWKNLKRNHPASLKR-----MTLLSIIGIIGLITW--------------SIL--LPI 40
           HH  W  ++   P  ++R     + ++ +I  +    W              + +    +
Sbjct: 32  HHHYWS-VELPMPRWIRRFPKTVLFVVVLIVCLLFAGWRWGFSSAPATQWETATVERGDV 90

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E  V++ G +    + V++ +  SG +    V+ G  + +G  L   +       +D   
Sbjct: 91  EELVTALGTLEP-GDYVDVGAQVSGQLTHLYVDVGDSVEEGQLLAEIDASVQQTQVDAGL 149

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++ LR  ++  ++ L+    +Y   ++  ++       F     +    +    I  +
Sbjct: 150 AELEALRAQLEQRQAELNLAELQYQRQQRLRDANATSEDAFQSAESNLA--ITGAQIKVL 207

Query: 161 YRSLKMKLTRMRSIYLN 177
              ++ K   +      
Sbjct: 208 QAQIRQKQASVEGDQAT 224



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 87/236 (36%), Gaps = 22/236 (9%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             +       + D ++ +   +    ++ +  + +    ++ L L E  ++++  LR  N
Sbjct: 125 DSVEEGQLLAEIDASVQQTQVDAGL-AELEALRAQLEQRQAELNLAELQYQRQQRLRDAN 183

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              ++A     + L      ++  Q     + + +   + T     I +P +GT+V   +
Sbjct: 184 ATSEDAFQSAESNLAITGAQIKVLQAQIRQKQASVEGDQATLGYAKIYAPRSGTVVSLDA 243

Query: 306 FSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD--IRE 360
                    +Q    LM+I     +  I  +V+   +  +  G        ++       
Sbjct: 244 R-EGQTLNANQTTPTLMRIA-DLSVMTISTEVSEADVHRLSAGMPV-----YFNTLGNET 296

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            ++ + + ++ P     +N         V+L   +   +++N +L +G  A+V F 
Sbjct: 297 VRYDSELRQVLPTPEVVNN---------VVLYTAEFDVANDNGQLMSGMTAQVFFV 343


>gi|298290516|ref|YP_003692455.1| efflux transporter RND family, MFP subunit [Starkeya novella DSM
           506]
 gi|296927027|gb|ADH87836.1| efflux transporter, RND family, MFP subunit [Starkeya novella DSM
           506]
          Length = 366

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 71/217 (32%), Gaps = 21/217 (9%)

Query: 209 NAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKE----IS 263
             + +    + E++     L +L   + +             EAN   A  L+      +
Sbjct: 87  GRIQEIRFKEGEQVKAGDVLVQLDAALVKASLDETEARLDLAEANFSRAQKLQASGSGTA 146

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           R L++ Q       + L        + TI +P  G +V  +S S+  Y      L+ +  
Sbjct: 147 RALDEAQAELNTSRALLHSQRVQIAKHTITAPFDG-VVGLRSVSNGAYIDTGDELVNL-E 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 +  KV  + +  V  G T  V            F   I  IDP++     +L  
Sbjct: 205 KIDTLKLDFKVPERHLASVSPGQTVMVSVDALPSRT---FTGTIYAIDPMVDVNGRSLS- 260

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                V  ++ +   +     LR G  A V    + T
Sbjct: 261 -----VRARLDNAQMA-----LRPGLFARVTIKGRET 287



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 47/122 (38%), Gaps = 5/122 (4%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G + ++++V  + S  +G I++ + + G Q+  G  L+  +       +D  +  +    
Sbjct: 71  GSLQSDESVK-VASEVAGRIQEIRFKEGEQVKAGDVLVQLDAALVKASLDETEARLDL-- 127

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
              +   S    L        +A +  + +L       HS   ++  + I++ +  +   
Sbjct: 128 --AEANFSRAQKLQASGSGTARALDEAQAELNTSRALLHSQRVQIAKHTITAPFDGVVGL 185

Query: 168 LT 169
            +
Sbjct: 186 RS 187


>gi|309796817|ref|ZP_07691220.1| efflux pump membrane protein [Escherichia coli MS 145-7]
 gi|308119576|gb|EFO56838.1| efflux pump membrane protein [Escherichia coli MS 145-7]
          Length = 351

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 57  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 116

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 117 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 158

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 159 AADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 216

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 217 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 274

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 275 RVPVEVSLDPKELMEHPLRIGLSMTATID 303


>gi|225851014|ref|YP_002731248.1| acriflavin resistance protein AcrE [Persephonella marina EX-H1]
 gi|225644912|gb|ACO03098.1| acriflavin resistance protein AcrE [Persephonella marina EX-H1]
          Length = 388

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 78/252 (30%), Gaps = 48/252 (19%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           S + ++++     +  +   R +        +A     ++      NL++ NA+S+  L 
Sbjct: 104 SEIKQNIREAKAALEELSKAREEALAGREAAKAGYEFAKRTYERFMNLYKDNAISKQQLE 163

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E  +  +  +L                               I   L+Q         
Sbjct: 164 EIETKMIGAKAQLDM-----------------------------IDAKLKQIDAKEKQVK 194

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +KL      +    + +P  G ++  +     + A    P++ I    K     A++  K
Sbjct: 195 AKLKYARIMQSYAYVKAPFDGVVIK-KMNDIGDMAAPGMPIVII--GDKDLRFLAQIDEK 251

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I  +  G    V    Y +   KK K  + +    +   + +      + V +KI  + 
Sbjct: 252 LIDKIHIGDEIDV----YIETIGKKLKGTVVEKSKSVDPMNRS------FTVKIKIPYIK 301

Query: 398 FSDNNIELRNGF 409
                  +  G 
Sbjct: 302 ------GVTPGM 307



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 63/203 (31%), Gaps = 31/203 (15%)

Query: 15  ASLKRMTLLSIIGIIGLITWS------------------ILLPIEISVS----------S 46
           A L R TL  ++ +  LI W                    +  I+ +V            
Sbjct: 2   AGLIRFTLFFLLPVFVLILWMGGYLTPRVEPGYAETEAKAVTGIKTAVIKPTVMKSEYEV 61

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G + + +N        + I+   +V+ G  + +G  +   +D E    I   K +++ L
Sbjct: 62  DGTVTSNNNAKVSTKLMAKIL-DIKVKEGDTVKKGQLIAVLDDSEIKQNIREAKAALEEL 120

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
               +   +  +     Y+  ++ +E       D          +     +      L M
Sbjct: 121 SKAREEALAGREAAKAGYEFAKRTYERFMNLYKD--NAISKQQLEEIETKMIGAKAQLDM 178

Query: 167 KLTRMRSIYLNRLDLENKSSLLR 189
              +++ I      ++ K    R
Sbjct: 179 IDAKLKQIDAKEKQVKAKLKYAR 201


>gi|71907884|ref|YP_285471.1| secretion protein HlyD [Dechloromonas aromatica RCB]
 gi|71847505|gb|AAZ47001.1| Secretion protein HlyD [Dechloromonas aromatica RCB]
          Length = 546

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 103/295 (34%), Gaps = 39/295 (13%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN----- 183
             +E  E++      +   +  KV   G+ +   SL+     +R+      D        
Sbjct: 85  PVYEGEEDEEPGAANQISISTEKVQKLGVKTEAASLRALDKIVRAAGRIEPDERRTYTIA 144

Query: 184 ---KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              +  + R L+++  + +   + LFE   V   +L   +R    +   +R         
Sbjct: 145 PKFEGYVERLLVNATGQPVGKGQPLFE---VYSPELVSAQREYAIAADGVRSLNAAGGEA 201

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              + +L D +     N+      D+ + Q         L    +T+   T  SP+ G +
Sbjct: 202 QSGMKQLADSSLARLKNW------DISEEQVKA------LAKSGETKRTLTFRSPVNGIV 249

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              ++          + L +I   S +  + A+V  + I  VK G  A V+   Y D   
Sbjct: 250 TEKKAI-QGMRFMPGEALYQIADLSAVWVV-AEVFEQDIGLVKSGAKAKVKISAYPD--- 304

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           K F+  +  + P ++     +       V ++      ++    L+ G  A+V  
Sbjct: 305 KTFEGAVTYVYPTLTAATRTV------PVRVE-----LANPGALLKPGMFAQVEL 348



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 69/189 (36%), Gaps = 10/189 (5%)

Query: 35  SILLPIEISVSSSGEILNEDNVV-EIKSPFSGIIKKFQV-ENGSQILQGTPLLTF---ED 89
           + L  ++  V ++G I  ++     I   F G +++  V   G  + +G PL      E 
Sbjct: 118 ASLRALDKIVRAAGRIEPDERRTYTIAPKFEGYVERLLVNATGQPVGKGQPLFEVYSPEL 177

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +       +    +++L       +S +  L +      K ++  EEQ+        +  
Sbjct: 178 VSAQREYAIAADGVRSLNAAGGEAQSGMKQLADSSLARLKNWDISEEQVKALAKSGETKR 237

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +  F   ++ +    K  +  MR +    L      S +  +    ++D+     L +  
Sbjct: 238 TLTFRSPVNGIVTE-KKAIQGMRFMPGEALYQIADLSAVWVVAEVFEQDIG----LVKSG 292

Query: 210 AVSQNDLNQ 218
           A ++  ++ 
Sbjct: 293 AKAKVKISA 301


>gi|240128969|ref|ZP_04741630.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268687352|ref|ZP_06154214.1| multidrug resistance translocase [Neisseria gonorrhoeae SK-93-1035]
 gi|268627636|gb|EEZ60036.1| multidrug resistance translocase [Neisseria gonorrhoeae SK-93-1035]
          Length = 413

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 132 NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHART 191

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 192 AVSQAQAAVKAALAEESSARAALGGDVSLRE-----------------QPEVQTAIGRLK 234

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                  +  + +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 235 DAWLNLRRTQVRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 292

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 293 MKIGQPAEL 301



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 59/186 (31%), Gaps = 11/186 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 83  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 142

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS---VYRS 163
           R +  T ++       + D+     + R    L   G   +         +S      ++
Sbjct: 143 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARTAVSQAQAAVKA 202

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQE 220
              + +  R+     + L  +  +  A+       L + +          V++  +   +
Sbjct: 203 ALAEESSARAALGGDVSLREQPEVQTAIGRLKDAWLNLRRTQVRAPADGQVAKRSVQVGQ 262

Query: 221 RIVYKS 226
           ++   +
Sbjct: 263 QVAAGA 268


>gi|162451076|ref|YP_001613443.1| RND family efflux transporter MFP subunit [Sorangium cellulosum 'So
           ce 56']
 gi|161161658|emb|CAN92963.1| efflux transporter, RND family, MFP subunit [Sorangium cellulosum
           'So ce 56']
          Length = 422

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 90/318 (28%), Gaps = 27/318 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K+     + K   L    E   EQ +D  G   +         ++    S+ + L     
Sbjct: 52  KAEKPAASVKEVTLAPVTELVMEQAVDISGTLDADEQVTLGAKVAGRLASISVDLASPVQ 111

Query: 174 IYLNRLDLENKSSLLR-ALLSSHQKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLEL 230
                  LE +   LR    ++          L      S+ D+      R    +  E 
Sbjct: 112 RDQVIAQLEARDYELRIEQATAALAQSRAQLGLPPDGPDSELDIEGTAVVRQALATFKEA 171

Query: 231 RENIHEQKNMLRHIN------ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           + N    + + R         +  + A +     ++    ++   +       S+L +  
Sbjct: 172 QANQVRARGLAREGLMSGMDLDAAEAAAVRAETAVQSAREEVRIREAAVRQRRSELRMAR 231

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           +      + SP+ G +V  +  +   Y     P++ +V       +R  +   +   V+ 
Sbjct: 232 QQLADTLVRSPLDG-VVQVRRANVGQYLAAGAPIVDVV-RIDPLRLRVAIPELEAASVRA 289

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G    V  P             + ++ P +  Q   L  +                N   
Sbjct: 290 GQPVRVSLPG-DSATYP---GTVARLAPALDPQSRTLLVES------------DIKNPGH 333

Query: 405 LRNGFPAEVLFTAKNTTL 422
           LR G          +  +
Sbjct: 334 LRPGSLVSAQIVVSSRPV 351


>gi|126662104|ref|ZP_01733103.1| Secretion protein HlyD [Flavobacteria bacterium BAL38]
 gi|126625483|gb|EAZ96172.1| Secretion protein HlyD [Flavobacteria bacterium BAL38]
          Length = 360

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 73/222 (32%), Gaps = 32/222 (14%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +++  + +V  +  +L+    +    +      Y+ A  ++  +    ++    +Q+  
Sbjct: 79  QNVSAGQLLVSINNTDLQAKKAQVDASITQATAGYNNAKKDYDRFTNLFAQQ-SASQKEL 137

Query: 274 ADEMSKLTILEKTRE--------------QKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            D  ++  + +   E                 I +P +GT+         + A    PL+
Sbjct: 138 DDMTARYEMAKAGLEAAKQMRNEVMAQFSYSNITAPFSGTVTN-TFVKEGDMANPGMPLV 196

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I   +    + A V+   I  VK G    +          K+    + ++        +
Sbjct: 197 SI-EGASKLQVTAMVSESDITSVKNGMPVKINVKSLN----KEVTGKVSEVS------LS 245

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
              T   Y V + +  +     + E+ +G    V F ++   
Sbjct: 246 AKNTGSQYLVKVTLDKM-----DKEILSGMFVNVQFPSEKKV 282



 Score = 43.1 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 44/117 (37%), Gaps = 11/117 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFS---GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           V++SG+I +E++     +  +   G + K  V+ G  +  G  L++  + +       KK
Sbjct: 48  VTASGKIESENSA----NLSTRMMGYVTKVNVKVGQNVSAGQLLVSINNTDLQA----KK 99

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +           +      +++  L     + +++L D   +Y    + +     
Sbjct: 100 AQVDASITQATAGYNNAKKDYDRFTNLFAQQSASQKELDDMTARYEMAKAGLEAAKQ 156


>gi|78187193|ref|YP_375236.1| secretion protein HlyD [Chlorobium luteolum DSM 273]
 gi|78167095|gb|ABB24193.1| Secretion protein HlyD [Chlorobium luteolum DSM 273]
          Length = 410

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 75/215 (34%), Gaps = 22/215 (10%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL------KEISRDLEQNQ 270
             Q       +LE R    + ++  R  + L++E  +  ++Y+      +      + +Q
Sbjct: 109 LAQLNQAKSLSLETRSKQVKAEDDFRKASILFNEKLISESDYISARTNAQAARAAYQSSQ 168

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSK 326
              A   S L   +   ++  + +PI+G+I+  QS                +M++     
Sbjct: 169 YAIAQNRSLLDQNQDRLKKTVVPAPISGSIISLQSKLGERVVGTGQFPGTEVMRLA-DLD 227

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQ 384
              +  +V    I +V+ G   +V    Y       F+  + +I    I +      +  
Sbjct: 228 SMQVEVEVNENDIVNVRLGNPVSVTVDAYGKR---VFRGTVHEIANSAISTAAGTQEEAT 284

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +  V ++I +         L+ G  A     ++ 
Sbjct: 285 NF-SVKVRIFNHERL-----LKPGMSATADIESER 313



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 1/136 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+++G+I  E ++  I    SG I +  V  G Q+ +G  L   +     + ++     +
Sbjct: 54  VTATGKIQPETDL-AISPDVSGEIIELPVSEGQQVKKGALLFKIQPDVYINQVEQSLAQL 112

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +      +S      + +      F  +     D++    +  +    Y  S    +
Sbjct: 113 NQAKSLSLETRSKQVKAEDDFRKASILFNEKLISESDYISARTNAQAARAAYQSSQYAIA 172

Query: 164 LKMKLTRMRSIYLNRL 179
               L       L + 
Sbjct: 173 QNRSLLDQNQDRLKKT 188


>gi|29346877|ref|NP_810380.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
 gi|298386474|ref|ZP_06996030.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           1_1_14]
 gi|29338774|gb|AAO76574.1| ABC transporter permease [Bacteroides thetaiotaomicron VPI-5482]
 gi|298260851|gb|EFI03719.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           1_1_14]
          Length = 415

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 92/260 (35%), Gaps = 35/260 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+   RL L+ +   L   L+  ++     + L E
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQERLQLKQERIGLNKELTLKKRRYEQYRRLVE 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  +++ D  Q E     +  +L             I+E   + N+   + +  +  ++ 
Sbjct: 168 EQLIAREDFRQAEEEYEAAKEQL-----------AVIDERIRQDNIFRESQISSLDENIR 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+      +L       E   I +PI G +    +          + + +I+     
Sbjct: 217 NMKRSLTLVRERL-------ENLKIKAPIDGQVGNLNA-QVGQSISAGEHIGQIITPD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFP----HYADIREKKFK----AIIEKIDPIISQQDN 379
             ++A++    ++ V  G  A   F      Y     K +              IS++  
Sbjct: 267 LKVQAQIDEHYVERVLPGLPAD--FTRDGGTYKLEVTKPYPEVKEGQFRTDLAFISERPE 324

Query: 380 NLQTQEYYEVILKITDLAFS 399
           N++  + Y + L++ D A +
Sbjct: 325 NIRAGQTYHINLQLGDPAQA 344



 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/213 (11%), Positives = 76/213 (35%), Gaps = 17/213 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G+++    ++ + +   G +++   E G+ +  G  +L   +       +++   +
Sbjct: 62  IRVIGQVMPS-RIIYMDAIEGGRVEERLKEEGAMVKAGDVILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++  ++N R  ++ E+  L       +  E   + R  +    L +      + F   
Sbjct: 121 AYQENELRNTRISMEQERLQLKQERIGLN-KELTLKKRRYEQYRRLVEEQLIAREDFRQA 179

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                 + +        I  + +  E++ S L   + + ++ LT+++   E         
Sbjct: 180 EEEYEAAKEQLAVIDERIRQDNIFRESQISSLDENIRNMKRSLTLVRERLEN-------- 231

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            + +  +      L   + +  +   HI ++  
Sbjct: 232 LKIKAPIDGQVGNLNAQVGQSISAGEHIGQIIT 264


>gi|33865237|ref|NP_896796.1| membrane fusion protein [Synechococcus sp. WH 8102]
 gi|33638921|emb|CAE07218.1| possible membrane fusion protein [Synechococcus sp. WH 8102]
          Length = 366

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/287 (17%), Positives = 106/287 (36%), Gaps = 39/287 (13%)

Query: 158 SSVYRSLKMKLTR-MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           SS  R L   + R  R      +    +   ++ +  S ++   + + L ++     +++
Sbjct: 31  SSRQRDLTPYVARAERGALSGVITASGELLAVQKVNVSPRQQGLLDQLLVDEG----DEV 86

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL-------------KEIS 263
           ++ + +      ++ + + E++ +LR     Y  +  +F                  E+ 
Sbjct: 87  SKGQLLAVMDPGDIEDRVQERQALLRQAEANYQSSKDDFDRRQELFTIGVISSDDFSEVR 146

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--- 320
             +   +        +L  LE+  +++ I +P  GTI   +      +   +        
Sbjct: 147 FQMIAAEAAVVAARERLEQLEEEEDERLIRAPFDGTITA-RYAEPGAFVTPTTTASATAG 205

Query: 321 -----IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
                IV  SK   + A+V    I  +  G +A +R   + D R   FKA + ++ P   
Sbjct: 206 ATSSSIVELSKGLEVAARVPESDIGRIATGQSAEIRVDAFPDER---FKAQVSEVAPRAE 262

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
           +QDN       +EV L     A  +   +L  G  A++ F    +T 
Sbjct: 263 KQDNVTS----FEVKL-----ALVNPPEKLLIGMTADINFQTGQSTP 300



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/280 (12%), Positives = 95/280 (33%), Gaps = 26/280 (9%)

Query: 9   LKRNHPASLKRMTLLSIIG----IIGLITWS--------ILLP-----IEISVSSSGEIL 51
           +KR+ P  L    +L++ G    ++    WS         +       +   +++SGE+L
Sbjct: 1   MKRSRPKWLTAALVLAVAGSGFVLLRFGPWSSRQRDLTPYVARAERGALSGVITASGELL 60

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               V  +     G++ +  V+ G ++ +G  L   +  +  D +  ++  ++    +  
Sbjct: 61  AVQKV-NVSPRQQGLLDQLLVDEGDEVSKGQLLAVMDPGDIEDRVQERQALLRQAEANYQ 119

Query: 112 TEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           + K   D     +    +    F     Q++       +   ++         R ++   
Sbjct: 120 SSKDDFDRRQELFTIGVISSDDFSEVRFQMIAAEAAVVAARERLEQLEEEEDERLIRAPF 179

Query: 169 TRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
               +         +   ++      ++    + + K L     V ++D+    RI    
Sbjct: 180 DGTITARYAEPGAFVTPTTTASATAGATSSSIVELSKGLEVAARVPESDI---GRIATGQ 236

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           + E+R +    +     ++E+   A  +      E+   L
Sbjct: 237 SAEIRVDAFPDERFKAQVSEVAPRAEKQDNVTSFEVKLAL 276


>gi|15899988|ref|NP_344592.1| competence factor transport protein ComB [Streptococcus pneumoniae
           TIGR4]
 gi|111658393|ref|ZP_01409077.1| hypothetical protein SpneT_02000420 [Streptococcus pneumoniae
           TIGR4]
 gi|182683015|ref|YP_001834762.1| competence factor transport protein ComB [Streptococcus pneumoniae
           CGSP14]
 gi|221230992|ref|YP_002510144.1| bacteriocin transport accessory protein [Streptococcus pneumoniae
           ATCC 700669]
 gi|298254255|ref|ZP_06977841.1| transport protein ComB [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298501834|ref|YP_003723774.1| lactococcin A ABC superfamily transporter permease [Streptococcus
           pneumoniae TCH8431/19A]
 gi|303255495|ref|ZP_07341554.1| bacteriocin transport accessory protein [Streptococcus pneumoniae
           BS455]
 gi|303259088|ref|ZP_07345066.1| competence factor transport protein ComB [Streptococcus pneumoniae
           SP-BS293]
 gi|303260846|ref|ZP_07346795.1| competence factor transport protein ComB [Streptococcus pneumoniae
           SP14-BS292]
 gi|303263173|ref|ZP_07349096.1| competence factor transport protein ComB [Streptococcus pneumoniae
           BS397]
 gi|303266711|ref|ZP_07352594.1| competence factor transport protein ComB [Streptococcus pneumoniae
           BS457]
 gi|303268952|ref|ZP_07354736.1| competence factor transport protein ComB [Streptococcus pneumoniae
           BS458]
 gi|18266860|sp|P36498|COMB_STRPN RecName: Full=Transport protein ComB
 gi|14971506|gb|AAK74232.1| competence factor transport protein ComB [Streptococcus pneumoniae
           TIGR4]
 gi|182628349|gb|ACB89297.1| competence factor transport protein ComB [Streptococcus pneumoniae
           CGSP14]
 gi|220673452|emb|CAR67920.1| bacteriocin transport accessory protein [Streptococcus pneumoniae
           ATCC 700669]
 gi|298237429|gb|ADI68560.1| lactococcin A ABC superfamily ATP binding cassette transporter
           permease protein [Streptococcus pneumoniae TCH8431/19A]
 gi|301801011|emb|CBW33677.1| bacteriocin transport accessory protein [Streptococcus pneumoniae
           INV200]
 gi|302597515|gb|EFL64602.1| bacteriocin transport accessory protein [Streptococcus pneumoniae
           BS455]
 gi|302637683|gb|EFL68169.1| competence factor transport protein ComB [Streptococcus pneumoniae
           SP14-BS292]
 gi|302639506|gb|EFL69963.1| competence factor transport protein ComB [Streptococcus pneumoniae
           SP-BS293]
 gi|302641490|gb|EFL71853.1| competence factor transport protein ComB [Streptococcus pneumoniae
           BS458]
 gi|302643789|gb|EFL74053.1| competence factor transport protein ComB [Streptococcus pneumoniae
           BS457]
 gi|302646946|gb|EFL77170.1| competence factor transport protein ComB [Streptococcus pneumoniae
           BS397]
          Length = 449

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/439 (10%), Positives = 146/439 (33%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             +E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHLEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV------SQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               + +  +    +L  +N         ++   +  +   ++  ++   I + ++ L  
Sbjct: 189 RDYQTAKSAIETGASLAGQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 244 INELY--------------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               Y               +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             + +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKVTASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKYVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|226226251|ref|YP_002760357.1| putative macrolide-specific efflux protein [Gemmatimonas aurantiaca
           T-27]
 gi|226089442|dbj|BAH37887.1| putative macrolide-specific efflux protein [Gemmatimonas aurantiaca
           T-27]
          Length = 451

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 66/206 (32%), Gaps = 15/206 (7%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L Q  +           ++ + K        L+DE  +    Y       L   Q +   
Sbjct: 92  LKQAVQDADAGVARANASLAQAKEEFDRTKTLHDEKIVTETEY-NTARTTLALAQTSVTS 150

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRAK 333
               L    +      I +PI G ++          A    +  L  I        I A 
Sbjct: 151 AQIALERARQNLAYTNIYAPIDGVVIERAINLGQTVAASLSAPKLFVIANDLSHMQILAS 210

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    I  +K+G  A      + D +   F+  +E++  + S   NN+ +   Y V++ +
Sbjct: 211 VDETDIGSIKEGQQARFTVQSFQDRQ---FRGTVEQV-RLSSTTANNVVS---YTVVIDV 263

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN 419
                ++ +  L  G  A V F    
Sbjct: 264 -----ANPDGALLPGMTATVQFVTGE 284



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 56/170 (32%), Gaps = 4/170 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI---ETTDLI 96
           +  +VS+SG +      VE+ +  SG + +  V+  S++ +G  +   +     +     
Sbjct: 41  LRSTVSASGTLNAV-QTVEVGTQVSGQVSELLVDFNSRVKKGQLIARIDPSLLKQAVQDA 99

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           D               E      L+++  V E  + +    L        S    +    
Sbjct: 100 DAGVARANASLAQAKEEFDRTKTLHDEKIVTETEYNTARTTLALAQTSVTSAQIALERAR 159

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
            +  Y ++   +  +       L     +SL    L     DL+ M+ L 
Sbjct: 160 QNLAYTNIYAPIDGVVIERAINLGQTVAASLSAPKLFVIANDLSHMQILA 209


>gi|319782963|ref|YP_004142439.1| efflux transporter RND family, MFP subunit [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317168851|gb|ADV12389.1| efflux transporter, RND family, MFP subunit [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 430

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 58/185 (31%), Gaps = 14/185 (7%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +   L       D++              L+  Q   A   + L   +    + TI +PI
Sbjct: 159 RAAELTRRGMATDQSLEAATATRDRSKAALDSAQANLAIAQADLKAQQTDLAKSTIYAPI 218

Query: 297 AGTIVYNQSFSSSNYAQQSQ-PLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
            G ++          A   Q P++ I+    +   + A V    I  VK G  A      
Sbjct: 219 DGIVLTRSVDPGQTVASSLQAPVLFIIAADLRNMELVAAVDEADIGAVKSGQHARFTVDA 278

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           + +     F A I  I       D  +     Y   L++      +N + LR G  A V 
Sbjct: 279 FPER---PFDAEIRDISYASVTTDGVVT----YNARLEVD-----NNELLLRPGMTATVS 326

Query: 415 FTAKN 419
              K 
Sbjct: 327 VVTKQ 331



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 55/141 (39%), Gaps = 3/141 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + ++VS++G +     V +I S  SGII+    E   Q+ +G  L T + ++   
Sbjct: 69  AAKADLTVAVSATGTLQPLTQV-DISSELSGIIRSVSAEENQQVKKGDVLATLDTVKL-- 125

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + +++          + E + +    N+  ++  A  +R     D   +  +       
Sbjct: 126 EVQIERAEASAKAAAANVEDATVTLAENEKALVRAAELTRRGMATDQSLEAATATRDRSK 185

Query: 155 YGISSVYRSLKMKLTRMRSIY 175
             + S   +L +    +++  
Sbjct: 186 AALDSAQANLAIAQADLKAQQ 206


>gi|265763257|ref|ZP_06091825.1| HlyD family secretion protein [Bacteroides sp. 2_1_16]
 gi|263255865|gb|EEZ27211.1| HlyD family secretion protein [Bacteroides sp. 2_1_16]
          Length = 407

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 17/220 (7%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDL 266
             +++ D    +  +            E +   +    N+   E  L      ++   + 
Sbjct: 86  QLIAEMDRVTLQSELASQRATYSGAKAEYEYQKKNYERNKGLHEKGLISDTDYEQSLYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ + +F    + L   E+     TI SPI G ++  +                L  I  
Sbjct: 146 EKAKSSFESSQASLAKAERNLSYATITSPIDGVVIS-RDVEEGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNN 380
                 + A V    I  V++G  AT     Y +     F+ I+ +I   D   +   ++
Sbjct: 205 DLTQMQVVADVDEADIGGVEEGQRATFTVDAYPND---VFEGIVTQIRLGDASSTSTSSS 261

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             T   YEV++     +  + +++L+    A V     + 
Sbjct: 262 STTVVTYEVVI-----SAHNPDLKLKPRLTANVTIYTLDR 296



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 57/148 (38%), Gaps = 1/148 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  SV+++G I     V E+ +  SGII K  V+  + + +G  +   + +     + 
Sbjct: 43  GEISESVTATGTIEPVTEV-EVGTQVSGIIDKIYVDYNAAVTKGQLIAEMDRVTLQSELA 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            ++ +    +   + +K   +     ++    +    E+ L ++     S  S   +   
Sbjct: 102 SQRATYSGAKAEYEYQKKNYERNKGLHEKGLISDTDYEQSLYNYEKAKSSFESSQASLAK 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +    S     + +  + ++R   E ++
Sbjct: 162 AERNLSYATITSPIDGVVISRDVEEGQT 189


>gi|121595241|ref|YP_987137.1| secretion protein HlyD family protein [Acidovorax sp. JS42]
 gi|120607321|gb|ABM43061.1| secretion protein HlyD family protein [Acidovorax sp. JS42]
          Length = 344

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/340 (13%), Positives = 96/340 (28%), Gaps = 34/340 (10%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                   +      ++         +  +  K  V E       + L     +      
Sbjct: 28  RPESSASTQSTDDAYVQADFTLVAPQVSGVIGKVLVEENQPVKAGDLLAAIDDRDFIVAV 87

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 +++   S+     R+          +   ++  A L   + +    +NL    +
Sbjct: 88  DAAKAQVAAAEASVAGLAARVAQQETAIRQAQAAVAVDDAELKLAEANQKRYRNLAADGS 147

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQN 269
            S                   +   E +  +R  +   + A L+ A    +I   DLE+ 
Sbjct: 148 GSIQ----------------AQQQAEAQLAIRLASRDKNRAGLQAARQQTDILKADLEKA 191

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   +   +     E       I +PI G I   +S     +    +PL+ ++P     Y
Sbjct: 192 KAALSQAQAAQAAAELKLSYTQITAPINGMI-GQKSVRVGAFVNAGKPLLAVIPLD-ALY 249

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQE 385
           I A     Q+  V+ G +  ++            K  +E + P      S    +  T  
Sbjct: 250 ITANFRETQLARVRAGQSVDIKVDALPGA---VLKGTVESLGPASGVSYSAVAPHNATGN 306

Query: 386 YYE------VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + +      V ++I        N+ +  G           
Sbjct: 307 FTKIVQRLPVRIRIDPDQLDAANLRV--GMSVTPKIRIGE 344



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 2/141 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID--TEKSA 116
           +    SG+I K  VE    +  G  L   +D +    +D  K  +      +     + A
Sbjct: 50  VAPQVSGVIGKVLVEENQPVKAGDLLAAIDDRDFIVAVDAAKAQVAAAEASVAGLAARVA 109

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                 +      A +  E +L +   K +   +   +  I +  ++      R+ S   
Sbjct: 110 QQETAIRQAQAAVAVDDAELKLAEANQKRYRNLAADGSGSIQAQQQAEAQLAIRLASRDK 169

Query: 177 NRLDLENKSSLLRALLSSHQK 197
           NR  L+        L +  +K
Sbjct: 170 NRAGLQAARQQTDILKADLEK 190


>gi|194334290|ref|YP_002016150.1| RND family efflux transporter MFP subunit [Prosthecochloris
           aestuarii DSM 271]
 gi|194312108|gb|ACF46503.1| efflux transporter, RND family, MFP subunit [Prosthecochloris
           aestuarii DSM 271]
          Length = 419

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 80/222 (36%), Gaps = 21/222 (9%)

Query: 210 AVSQNDLNQQERIVYKST-LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            V+Q + N+    + +S  LE R    +  +  R  + LY+E  +  ++YL   +     
Sbjct: 102 YVNQVEQNRARLNLARSQRLEARARKLKSDDDFRKASMLYNEKLISQSDYLTAKTNAEAA 161

Query: 269 NQ------RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPL 318
                    T     S L    +   +  + SPI G I+   S                +
Sbjct: 162 AAIHDASISTINQNQSLLDQSLEQLNKTVVKSPIEGVIIALNSKLGERVVGTGQFPGTEV 221

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-PIISQQ 377
           ++I  +     +  +V    I +V KG +  V    Y+D     FK ++ +I    I+Q 
Sbjct: 222 LRIA-NLDSMQVEVEVNENDIVNVNKGDSVIVSVDAYSDRT---FKGLVREISNSAITQS 277

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               +    + V ++I      +++  L+ G  A      + 
Sbjct: 278 AGTQEEVTNFSVKIRI-----LNHDRLLKPGMSATADIETER 314



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 4/129 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V+++G+I  E  V    SP  SG I +  V  G  + +GT L   +     + ++  +  
Sbjct: 55  VTATGKIEPEIEVNL--SPDVSGEITELPVSEGEHVEKGTLLFKIQPDVYVNQVEQNRAR 112

Query: 103 IKNLRC-HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           +   R   ++     L   ++         E    Q      K ++  +   +    S  
Sbjct: 113 LNLARSQRLEARARKLKSDDDFRKASMLYNEKLISQSDYLTAKTNAEAAAAIHDASISTI 172

Query: 162 RSLKMKLTR 170
              +  L +
Sbjct: 173 NQNQSLLDQ 181


>gi|218459435|ref|ZP_03499526.1| hypothetical protein RetlK5_08067 [Rhizobium etli Kim 5]
          Length = 152

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 50/142 (35%), Gaps = 15/142 (10%)

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + L     +     + +P  G I+  +   +      +  +  ++  ++  ++R+ V  
Sbjct: 11  EATLASARTSLADTELRAPNDGIILS-RVRENGAIVSPADTVF-VLSLTEPVWVRSYVAE 68

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVIL 391
             +  +  G   +V         EK ++  I  I P+      S +   L+T   Y + +
Sbjct: 69  PDLGRIHPGMKVSV---ASDTAPEKPYEGTIGFISPVAEFTPKSVETPELRTDLVYRLRI 125

Query: 392 KITDLAFSDNNIELRNGFPAEV 413
            I          +LR G P  V
Sbjct: 126 VIDKPGP-----DLRQGMPVTV 142


>gi|307946699|ref|ZP_07662034.1| RND family efflux transporter MFP subunit [Roseibium sp. TrichSKD4]
 gi|307770363|gb|EFO29589.1| RND family efflux transporter MFP subunit [Roseibium sp. TrichSKD4]
          Length = 367

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 74/227 (32%), Gaps = 11/227 (4%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
              +     +  + + +L  +++ ++L     +  + +  ++   + N V +      E 
Sbjct: 43  ARAQETQADLFRVKVQKLTAQDRKAVLEIRGRTEAEAMVAVRAETKGNVVHRPATEGAEV 102

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE----ISRDLEQNQRTFADEM 277
                  +L +   E K +    N    E + + A+ L              +       
Sbjct: 103 AAGDILCQLDKGTREAKLLEAKANLAQAELDHDAASQLVTKGFTAQTRAAAVKAQLDAAH 162

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +++   +   ++  I +PI GT+  + +    +Y Q       +V  S       +V+  
Sbjct: 163 ARVKEAKLELDRTIIRAPITGTVQSSMAN-VGDYLQGGDVCATVV-KSDPLIAIGQVSEI 220

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
            +  +  G  A V       I  +K +  +  I P         + +
Sbjct: 221 NVARISVGMEADVEL-----ITGQKMQGKVRYISPAADADTRTFRIE 262


>gi|53713162|ref|YP_099154.1| periplasmic component of efflux system [Bacteroides fragilis YCH46]
 gi|60681424|ref|YP_211568.1| HlyD family secretion protein [Bacteroides fragilis NCTC 9343]
 gi|253566829|ref|ZP_04844281.1| HlyD family secretion protein [Bacteroides sp. 3_2_5]
 gi|52216027|dbj|BAD48620.1| periplasmic component of efflux system [Bacteroides fragilis YCH46]
 gi|60492858|emb|CAH07633.1| putative HlyD family secretion protein [Bacteroides fragilis NCTC
           9343]
 gi|251944392|gb|EES84881.1| HlyD family secretion protein [Bacteroides sp. 3_2_5]
 gi|301162883|emb|CBW22430.1| putative HlyD family secretion protein [Bacteroides fragilis 638R]
          Length = 407

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 17/220 (7%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDL 266
             +++ D    +  +            E +   +    N+   E  L      ++   + 
Sbjct: 86  QLIAEMDRVTLQSELASQRATYSGAKAEYEYQKKNYERNKGLHEKGLISDTDYEQSLYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ + +F    + L   E+     TI SPI G ++  +                L  I  
Sbjct: 146 EKAKSSFESSQASLAKAERNLSYATITSPIDGVVIS-RDVEEGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNN 380
                 + A V    I  V++G  AT     Y +     F+ I+ +I   D   +   ++
Sbjct: 205 DLTQMQVVADVDEADIGGVEEGQRATFTVDAYPND---VFEGIVTQIRLGDASSTSTSSS 261

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             T   YEV++     +  + +++L+    A V     + 
Sbjct: 262 STTVVTYEVVI-----SAHNPDLKLKPRLTANVTIYTLDR 296



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 57/148 (38%), Gaps = 1/148 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  SV+++G I     V E+ +  SGII K  V+  + + +G  +   + +     + 
Sbjct: 43  GEISESVTATGTIEPVTEV-EVGTQVSGIIDKIYVDYNAAVTKGQLIAEMDRVTLQSELA 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            ++ +    +   + +K   +     ++    +    E+ L ++     S  S   +   
Sbjct: 102 SQRATYSGAKAEYEYQKKNYERNKGLHEKGLISDTDYEQSLYNYEKAKSSFESSQASLAK 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +    S     + +  + ++R   E ++
Sbjct: 162 AERNLSYATITSPIDGVVISRDVEEGQT 189


>gi|281424038|ref|ZP_06254951.1| putative ABC transport system, lipoprotein [Prevotella oris F0302]
 gi|281401821|gb|EFB32652.1| putative ABC transport system, lipoprotein [Prevotella oris F0302]
          Length = 312

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 82/244 (33%), Gaps = 39/244 (15%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              + +   + + LR  +   Q+++     L +  A ++  L+     +     +L    
Sbjct: 100 QAQKPNTNTQIAALRQQVVKAQEEVNRYAELVKDGAANRKILDDSRSQLLVLQRQLAAQS 159

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                  R +N      ++E    +                             +  I S
Sbjct: 160 ATLGTSTRSLNAQMGTTDVEKLQVV-------------------------DQLRKCHISS 194

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           PI G ++  +      +A   +PL K V      ++RA +T +Q+Q V+ G   TV +  
Sbjct: 195 PINGVVLE-KYAQQGEFAIVGKPLFK-VADVDKLFLRAYITSQQLQKVRLGQRVTV-YAD 251

Query: 355 YADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           Y   + K +   +  I             ++ +    Y + + +     +D NI++  G 
Sbjct: 252 YGGKQRKSYPGTVAWIASKSEFTPKTILTDDERADLVYAIKVAV----KNDGNIKI--GM 305

Query: 410 PAEV 413
             EV
Sbjct: 306 YGEV 309


>gi|239947818|ref|ZP_04699571.1| multidrug resistance protein A [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922094|gb|EER22118.1| multidrug resistance protein A [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 205

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 73/209 (34%), Gaps = 13/209 (6%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---ANYLKEISRDLEQNQRTFADEM 277
           + + K+     + + + KN  +     Y +A L+       L+ +  +    Q T  +  
Sbjct: 2   QELNKAKFASSKTLDDSKNAYQKAKTDYKQAQLDLDISKQNLQLLELEKAAEQETLKELT 61

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
               +  ++ +   +++ + G I  N S    NY    + L  IV      YI+A     
Sbjct: 62  ENKKVTLRSLQNTKLIAMVPG-IFGNSSLEVGNYIVSGRALFSIV-QDNTMYIQANFKET 119

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKI 393
           QI+  K G    + F        K     I  I P    +     ++  T  + +++  +
Sbjct: 120 QIKKFKSGMKVKIEFDALPK---KVIYGKIRNIAPATGSKFSLIPSDNATGNFTKIVQSV 176

Query: 394 TD-LAFSDNNIELRNGFPAEVLFTAKNTT 421
              + F   N  L  G  A V      +T
Sbjct: 177 PVLIDFESPNANLVPGMSAIVSIRTDQST 205


>gi|149174791|ref|ZP_01853416.1| cobalt-zinc-cadmium resistance protein [Planctomyces maris DSM
           8797]
 gi|148846485|gb|EDL60823.1| cobalt-zinc-cadmium resistance protein [Planctomyces maris DSM
           8797]
          Length = 485

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 68/385 (17%), Positives = 131/385 (34%), Gaps = 51/385 (13%)

Query: 39  PIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            +  +    G +  +D     +K+P  GI+ + +V+ G  +  G  L      E      
Sbjct: 73  KLNQTRVVPGRLQYDDRKHVAVKAPTEGILVEVRVKPGDIVQSGQVLAVLNSRE------ 126

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                I   R  +    +    +  +YD  + A ++  ++L+D L   H     V     
Sbjct: 127 -----IGTARADLLQRIADYQLVRKQYD-WKSAIQNNVQKLVDALLS-HQAMDDVEAQFT 179

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                S + +L    + YL    +  K++                  L +  A+SQ  + 
Sbjct: 180 DKKLGSYRSQLLPAYTRYLLAETINKKTA-----------------PLAKSGAISQQTIQ 222

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD-LEQNQRTFADE 276
            +E  V ++   L+  + EQ      +      A+L  A+    ISR  LE       D 
Sbjct: 223 MREADVQETRAALKA-LCEQSIYDVKLERDQGLADLNDADNRMTISRQHLESLVGCAVDL 281

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            +      +   +  I++P  GTI   ++FS S    ++  L  +   +   ++ A +  
Sbjct: 282 NNAELKAAEKLSRLEIIAPFTGTIEE-RTFSQSERLNRADSLFTLA-QTDTLWVAADIRE 339

Query: 337 KQIQHV--KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
                +    G   TV            F A +  +   +S   N+          + + 
Sbjct: 340 SDWNSIELNTGQNLTVTVNAVPGRT---FSARLHYLGRQVSASTNS----------VPLI 386

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
               + + I LR G  A+V  + K 
Sbjct: 387 AELKNPDGI-LRPGMYAQVRISGKQ 410


>gi|261317695|ref|ZP_05956892.1| efflux pump protein [Brucella pinnipedialis B2/94]
 gi|261752364|ref|ZP_05996073.1| efflux pump protein [Brucella suis bv. 5 str. 513]
 gi|261755023|ref|ZP_05998732.1| efflux pump protein [Brucella suis bv. 3 str. 686]
 gi|265988728|ref|ZP_06101285.1| efflux pump protein [Brucella pinnipedialis M292/94/1]
 gi|265998193|ref|ZP_06110750.1| efflux pump protein [Brucella ceti M490/95/1]
 gi|261296918|gb|EEY00415.1| efflux pump protein [Brucella pinnipedialis B2/94]
 gi|261742117|gb|EEY30043.1| efflux pump protein [Brucella suis bv. 5 str. 513]
 gi|261744776|gb|EEY32702.1| efflux pump protein [Brucella suis bv. 3 str. 686]
 gi|262552661|gb|EEZ08651.1| efflux pump protein [Brucella ceti M490/95/1]
 gi|264660925|gb|EEZ31186.1| efflux pump protein [Brucella pinnipedialis M292/94/1]
          Length = 388

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 109 LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFNRVSA 168

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 169 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 224

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 225 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFLAVGDPAFTLI-- 271

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 272 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITP 316



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 25/241 (10%), Positives = 70/241 (29%), Gaps = 24/241 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIK 60
           ++    HP   + + ++  +  I +  W             G+ ++ED+       V I 
Sbjct: 34  QDQSPKHPMLRRILLIVGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAIT 85

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG + +  V     + +G  L   +       +D  K ++      +    + L   
Sbjct: 86  PQVSGQVIRVAVGPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKL----AGLVLT 141

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +        +       +   +  +     F            +++ +          
Sbjct: 142 YKQQLASVAQAKDDVTFAQEQFNRVSALVHDKFEARAQFDQAERALQVAKQEQNAAASAA 201

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
               + L   L    Q+  +    L  K   ++ +L ++   + +        + + +N+
Sbjct: 202 AATLAQLGGTLDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPFAGTVTQVENI 255

Query: 241 L 241
            
Sbjct: 256 Q 256


>gi|113955077|ref|YP_730142.1| membrane fusion protein [Synechococcus sp. CC9311]
 gi|113882428|gb|ABI47386.1| possible membrane fusion protein [Synechococcus sp. CC9311]
          Length = 391

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 101/302 (33%), Gaps = 32/302 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN--KSSLLRALLSSH 195
           L   L    S    + +Y + +   SL   +T    +   R    +  K  LL ALL   
Sbjct: 48  LFWMLNSSRSGGRDLSDYTVEATLGSLPGVITASGELEAIRRVNVSPKKGGLLEALLVDE 107

Query: 196 QKDLTMMKNLF--EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              +   + L   ++  + Q+ L++ + +  ++  +      + K            A  
Sbjct: 108 GVRVEKGQLLARMDRGDI-QDRLDELKALSRQAKADYEAKASDYKRRQSLFASGVISAA- 165

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                  +       ++ TF     ++   +   ++  I +P +G I   +     ++  
Sbjct: 166 ----DRDDYRARYLSSKATFEATQERIQQRDVEGDELLIRAPFSGLITE-RYAEPGSFVT 220

Query: 314 QSQPLMK--------IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +             IV  S+   + AKV    I  ++ G  A VR   + D     F A
Sbjct: 221 PTTSASSSAGATSSSIVELSQGLEVTAKVPESDIGRIQIGQVANVRVDAFPDR---SFSA 277

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
            +  I P   + +N +  +          +L   +    LR G  A+V F     T A  
Sbjct: 278 EVRDIAPRAEKTNNVISFEV---------ELTLLNPPPILRIGMTADVNFQTG-RTAAST 327

Query: 426 II 427
           ++
Sbjct: 328 LV 329



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 53/139 (38%), Gaps = 5/139 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + L  +   +++SGE+      V +     G+++   V+ G ++ +G  L   +  +  D
Sbjct: 69  ATLGSLPGVITASGELEAI-RRVNVSPKKGGLLEALLVDEGVRVEKGQLLARMDRGDIQD 127

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +D  K   +  +   + + S      + +     +   R+    D+  +Y S+ +    
Sbjct: 128 RLDELKALSRQAKADYEAKASDYKRRQSLFASGVISAADRD----DYRARYLSSKATFEA 183

Query: 155 YGISSVYRSLKMKLTRMRS 173
                  R ++     +R+
Sbjct: 184 TQERIQQRDVEGDELLIRA 202


>gi|90423541|ref|YP_531911.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90105555|gb|ABD87592.1| Secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 446

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/380 (10%), Positives = 118/380 (31%), Gaps = 72/380 (18%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            V +SG +     V  + S  SG + +  V+    + +   +      +           
Sbjct: 54  VVRASGSLQPISQV-LVGSQVSGQVVEILVKPNDHVERDQVIARISSDQIGKRYQGLLAQ 112

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           + + R  +   ++ ++    + +        RE +L +          ++       + +
Sbjct: 113 LASARADVSLREARVELSAVQVERARSEVADREAKLRNAGLAEDIAGRQL--ARRRELSK 170

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +  + +  + S+ +     E  ++   A L++ +  +   +         ++++ ++E +
Sbjct: 171 TGAISVADLDSVTVQSRQAETTTASAEAQLATARIAVDAARQ--------EHEIARRELV 222

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           +  +T+++++   E+  +                                          
Sbjct: 223 LATATVDIQQLKAEEAAV------------------------------------------ 240

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQI 339
                E   I++P+ G I+  ++         S     L  +    +   +   +    +
Sbjct: 241 ---ELEHTNIVAPVRGVILQ-RTVELGQTVAASFATPTLFTLAESLERMELHLVIDESAV 296

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           + V++G       P       ++ K  I  I  +  Q + N+ +   Y  ++ +      
Sbjct: 297 KRVRRGQQVIFSVPA---QPLRELKGTILAI-RVAPQINQNVVS---YTALVSV-----E 344

Query: 400 DNNIELRNGFPAEVLFTAKN 419
           + + EL  G  A        
Sbjct: 345 NPDGELFPGMTATARILTDE 364


>gi|225872398|ref|YP_002753853.1| efflux transporter, RND family, MFP subunit [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791990|gb|ACO32080.1| efflux transporter, RND family, MFP subunit [Acidobacterium
           capsulatum ATCC 51196]
          Length = 431

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 124/381 (32%), Gaps = 108/381 (28%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +++ PI  +  +           +I +P    +K F V+ G+ + +G  L T ++ +   
Sbjct: 63  AVMAPISQAAIAP----------KITAP----VKHFYVQRGAHVHRGELLATLDNAD--- 105

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
                                           L+ A +  +  LL     Y ST      
Sbjct: 106 --------------------------------LQAAVQDNQGVLLAQQAAYDSTVK---- 129

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +   Y   ++ + + +                 A L  +Q  +   K L+ + A+   
Sbjct: 130 ATVPQTYEQARLNVAQTK-----------------ANLELNQNIVKSRKKLYAQGAIPGR 172

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD--LEQNQRT 272
           +L+  E  + ++                   +   +A L+  N ++++SR+  L+Q +  
Sbjct: 173 ELDTSEAALVQA-------------------QTAYDAALKVFNGMQQVSREAALKQAKGQ 213

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                 +    E       I SPI G +     ++    A     L+ ++  + +   + 
Sbjct: 214 LESAQGRYAAAEAQLSYSEIRSPIDGVVTDRPLYA-GETATAGSALLTVM-DTSVLIAKL 271

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            +   Q Q +  G +ATV+ P             +  I P +      +      EV ++
Sbjct: 272 HIPQPQAQALSVGNSATVQVPG----MLHPVSGKVTIISPALDPGSTTV------EVWVE 321

Query: 393 ITDLAFSDNNIELRNGFPAEV 413
           I      + + +LR G    V
Sbjct: 322 I-----KNPDGDLRPGTAVTV 337


>gi|85710634|ref|ZP_01041698.1| RND efflux membrane fusion protein [Erythrobacter sp. NAP1]
 gi|85687812|gb|EAQ27817.1| RND efflux membrane fusion protein [Erythrobacter sp. NAP1]
          Length = 348

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 59/174 (33%), Gaps = 11/174 (6%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + ER   +  L+   N      +     +   +A L      ++    +E+ +   A  
Sbjct: 107 LEAERGQVEVQLQTARNALATAEIDLRRMQELFQAGLAARREYEQAQIRVEEMRGNVAAA 166

Query: 277 MSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            + L   E    +++   I +P  G I    +   + +    Q L   VP ++   +   
Sbjct: 167 EASLVRTETNLARQSEQLITAPRNGFIQSINAGDEATFISAGQVLATFVPETQTRVVEVF 226

Query: 334 VTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           V  + +  V+ G  A         V+F  +  +    F  I+E +D +      
Sbjct: 227 VDGRDVALVQTGEEARIEFEGWPAVQFSGWPSVAIGTFPGIVETVDQVAQPDGR 280



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 63/160 (39%), Gaps = 3/160 (1%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             L++I+  +  + +   +       +   +   +   E+ +  SG I+++ V +GS++ 
Sbjct: 29  TVLIAIVLAVLFLIYVPWVQTTGGRGTVTTLNPNERQQEVNALVSGRIEEWYVGDGSRVQ 88

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G P++   DI+   L+   +     +   + T ++AL         +++ F++      
Sbjct: 89  RGDPIVRIADIDPN-LLQRLEAERGQVEVQLQTARNALATAEIDLRRMQELFQAGLAARR 147

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           ++  +      +     +++   SL    T +       +
Sbjct: 148 EY--EQAQIRVEEMRGNVAAAEASLVRTETNLARQSEQLI 185


>gi|206602406|gb|EDZ38887.1| Secretion protein (HlyD) [Leptospirillum sp. Group II '5-way CG']
          Length = 301

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 85/237 (35%), Gaps = 14/237 (5%)

Query: 188 LRALLSSHQKDLTMMKNLFEKNA-VSQNDLN------QQERIVYKSTLELRENIHEQKNM 240
           LR +  +      + K L+ + A V   DL       + + +V      L  +  ++ + 
Sbjct: 45  LREVQLAFHDTGRIQKLLYLEGAPVKAGDLMAVMDPVRYQDLVEGDLRALERDRAQRLDA 104

Query: 241 LRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            R  N +       F +  +  +    L+        + ++L    +  +   + +P+ G
Sbjct: 105 ERTWNRVRKLTRAAFNSRQQKDDARAALDMAIAQVKRDKAQLAYDTRQLDDTKVYAPVDG 164

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            IV N+     + A    P+  +   ++  + R  +   ++  V +G TA V    +   
Sbjct: 165 -IVQNRILEPGDMAFPQSPVYTLA-RTRPLWARVYLEEPELGQVHQGMTAYVTSDSFPGQ 222

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           R   F   +  I P        +QT     +++  T +  S    +LR G P  V  
Sbjct: 223 R---FVGYVGYISPSAEFTPKEVQTLHQRTILVYRTRIYLSCPTRKLRLGMPVTVTI 276



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 58/157 (36%), Gaps = 6/157 (3%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC-HIDTEKSALDFLN 121
            +G I+K     G+ +  G  +   + +   DL++    +++  R   +D E++      
Sbjct: 54  DTGRIQKLLYLEGAPVKAGDLMAVMDPVRYQDLVEGDLRALERDRAQRLDAERTW----- 108

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           N+   L +A  +  +Q  D         ++V        Y + ++  T++ +     +  
Sbjct: 109 NRVRKLTRAAFNSRQQKDDARAALDMAIAQVKRDKAQLAYDTRQLDDTKVYAPVDGIVQN 168

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                   A   S    L   + L+ +  + + +L Q
Sbjct: 169 RILEPGDMAFPQSPVYTLARTRPLWARVYLEEPELGQ 205


>gi|325277766|ref|ZP_08143327.1| secretion protein HlyD family protein [Pseudomonas sp. TJI-51]
 gi|324097104|gb|EGB95389.1| secretion protein HlyD family protein [Pseudomonas sp. TJI-51]
          Length = 397

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 72/219 (32%), Gaps = 22/219 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S   +L   + ++R +Y N   L+ + +  +A L   Q+D    K L +  A++ 
Sbjct: 98  QVALQSAEANLARTVRQVRGLYSNVDSLKAQLATRQAELRKAQQDFNRRKVLADSGAIAA 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L                     ++ L       + A  + +     +   +  +    
Sbjct: 158 EEL------------------SHARDDLSVAQAAVNSARQQLSTSSALVDDTVVSSHPEV 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               + L        + T+++P+ G +   ++       Q     M ++P     +I A 
Sbjct: 200 MAAAADLRQAYLDHARTTLVAPVTGYVAK-RTVQLGQRLQPGTATMAVIPLD-QVWIDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               Q++ ++ G    +    Y       +   ++ +  
Sbjct: 258 FKETQLRDMRIGQPVEISADLYGSAVT--YSGTVDSLGA 294



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 2/149 (1%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
            G+ TW+    +     S+ +     NVVEI    +G +     ++G  +  G  LL F+
Sbjct: 34  AGIGTWAWYSLVGRWYESTDDAYVNGNVVEITPLITGTVTSIGADDGDLVHAGQVLLQFD 93

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             ++   +   + ++      +    S +D L  K  +  +  E R+ Q      K  + 
Sbjct: 94  PADSQVALQSAEANLARTVRQVRGLYSNVDSL--KAQLATRQAELRKAQQDFNRRKVLAD 151

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
              +    +S     L +    + S    
Sbjct: 152 SGAIAAEELSHARDDLSVAQAAVNSARQQ 180


>gi|145590167|ref|YP_001156764.1| RND family efflux transporter MFP subunit [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048573|gb|ABP35200.1| efflux transporter, RND family, MFP subunit [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 379

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 65/208 (31%), Gaps = 22/208 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++ DL   +        +L   +    ++ + INE   +     A             +
Sbjct: 94  VNEGDLL-IKLTDASDVAQLNS-LKALADLAKVINERDKQQLAIQAISKNVFDTSKADAK 151

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A    ++ ++ K    K + +P +G I    S +   Y      L+ +       ++
Sbjct: 152 SKQAQVEQQIALVAK----KNLKAPFSGRI-GIVSINPGQYVNPGDKLLTLQ-TLDPIFV 205

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              +     + ++ G   TV    + D     F   I  + P +     N+Q        
Sbjct: 206 DFNLPQNNAEQIQVGQDVTVTTDAFKDA---SFTGKITAVSPKVDTNTRNIQV------- 255

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAK 418
               +   ++ + ++  G  A V     
Sbjct: 256 ----EAQIANPDKKILPGMFANVNIQIG 279



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/117 (10%), Positives = 40/117 (34%), Gaps = 4/117 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G+++   +++G  + +G  L+     + +D+  L  +        +  E+         
Sbjct: 80  GGLVQTVPIKSGQDVNEGDLLIKL--TDASDVAQLNSLKALADLAKVINERDKQQLAIQ- 136

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             + +  F++ +        +     + V    + + +      ++     Y+N  D
Sbjct: 137 -AISKNVFDTSKADAKSKQAQVEQQIALVAKKNLKAPFSGRIGIVSINPGQYVNPGD 192


>gi|297543789|ref|YP_003676091.1| RND family efflux transporter MFP subunit [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296841564|gb|ADH60080.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 588

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 67/442 (15%), Positives = 147/442 (33%), Gaps = 76/442 (17%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I + V+ +G I N+  V+ +K   +G +KK   + G  + +G  L   E+      I+
Sbjct: 42  GNISMKVTGTGNITNDVRVITLK--GNGTVKKVYFKEGDTVKKGDLLYEIENESLKQQIE 99

Query: 98  LKK----VSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCS- 150
             K    ++ + L+  +++   ++    + +  D +  +   ++ Q +    +  +    
Sbjct: 100 EAKLNVDLAAQQLKSDLESYNKSIANLKITSPSDGIVDSILVQKGQNVSAGTQVATIADY 159

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL-----RALLSSHQKDLTMMKNL 205
                 +      +K      ++       L   +  +     +A+  +  +   +   L
Sbjct: 160 SHVTVRVPFNSVQIKNIKVGQKADIFLYDSLTTITGTVEYVSHQAVPHNTMEYYYVTVGL 219

Query: 206 FEKNAVS---QNDL-----NQQERIVYKSTLELREN---IHEQKNMLRHINELYDEANLE 254
               A+S   +  +     N  E+ +  STL ++     I +    +  IN    E N++
Sbjct: 220 DNPGALSDGMKVQVSIHTDNGVEKALEDSTLTVKNTVTVIAKTSGTVEKINVTEGE-NVK 278

Query: 255 FANYLKEIS------RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
               L E+S        ++ ++       +    L +  E   I SPI G IV       
Sbjct: 279 KGTLLVELSSDNISDTQIQNDKLALTQAQNNYNELLEQLENLKIYSPIDGKIVSQNI-KE 337

Query: 309 SNYAQQSQ----------PLMKIVPHSKLTYI-----RAK---------------VTPKQ 338
            +    S             +  VP S ++ +      A+               V    
Sbjct: 338 GDVLGSSTSDSTTNGSQSSQLTFVPISDVSELSNYESEAETAVIVGNGNYTVNLSVDEAD 397

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I+++K G  A +      D+ +K F   +  I  +             Y V +++     
Sbjct: 398 IKNIKVGQKAEI---TTDDLPDKTFTGTVTAISQL----PTVENGVSSYTVTVEL----- 445

Query: 399 SDNNIELRNGFPAEVLFTAKNT 420
            D+N +L  G    +       
Sbjct: 446 -DSNGDLMLGMSVNISIIVAEK 466


>gi|296122496|ref|YP_003630274.1| hypothetical protein Plim_2249 [Planctomyces limnophilus DSM 3776]
 gi|296014836|gb|ADG68075.1| hypothetical protein Plim_2249 [Planctomyces limnophilus DSM 3776]
          Length = 385

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 60/358 (16%), Positives = 117/358 (32%), Gaps = 39/358 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++   P    R+ LL+ + +    T +  L +  S    G +  E  +  +++  S  I 
Sbjct: 16  VQPPVPVPTIRLALLAFLVLGAGATLTAGLDLMESKHCQGAL--EAQISVVRAERSAQIS 73

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G+ +  G PL+T  D    + I   +  +   +  ++  K+             
Sbjct: 74  QVHVTPGAVVAVGQPLITVLDPHVIERIATLEQQLTEAKAEVERSKAEAAV--------- 124

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E R  +L           +++           +          YL RL+       L
Sbjct: 125 -DLEWRRRELKAAEFDAQLRAAELLQSQFQKQVEHVAW------QDYLKRLNPVTTLVSL 177

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +A   S   D +               L  +ER+      +      E  ++   I E  
Sbjct: 178 KAEAGSIIFDKS---------------LPDEERLRALVAQDAAATTVEAISVQLQICEKR 222

Query: 249 DEANLEFANYLKEISRD---LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                E    L ++ +    +E  +        +L+ L   ++  TILS   GT+     
Sbjct: 223 LIDLKELDKDLVQLIQKAHGVEVAKAKVQRIEFELSDLNAKKQGVTILSENYGTVSDLNL 282

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            +  +     Q L+ +V   +   + A +  K I  V KG    + FP    +R+   
Sbjct: 283 KA-GDLVTAGQKLLDLVDQDRRYLL-ASIPSKDISQVSKGSKVELIFPG-NQMRQGTV 337


>gi|225075919|ref|ZP_03719118.1| hypothetical protein NEIFLAOT_00943 [Neisseria flavescens
           NRL30031/H210]
 gi|224952634|gb|EEG33843.1| hypothetical protein NEIFLAOT_00943 [Neisseria flavescens
           NRL30031/H210]
          Length = 396

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 84/273 (30%), Gaps = 31/273 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F          L   + + +         + +  L +A L+  Q DL   ++L    AVS
Sbjct: 102 FQLAYERAQNELIQAIRQNKQQTAVNSKAKAQVLLSKADLARAQADLRRRESLAGTEAVS 161

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +L+     V ++   L+    E+ +    +                         Q  
Sbjct: 162 GEELSHARDAVVQAQAALKAVEAEEVSAQAALGNNIPLRQ-----------------QPA 204

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +S +       ++  I SPI+G I             Q  P+M +VP S+  ++ A
Sbjct: 205 VQTAISHIKDAWLNLQRTQIRSPISGQIAKRNV-QVGQRIVQGTPMMAVVPLSE-LWVDA 262

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQ 384
                Q++ +K G    +    Y       +   +  +          + +Q       +
Sbjct: 263 NFKESQLRKMKIGQPVEMTADLYGSKV--VYHGKVMGLSAGTGSAFSLLPAQNATGNWIK 320

Query: 385 EYYEVILKITDLAFSDNNIELRNG--FPAEVLF 415
               V ++I+  A       LR G     +V  
Sbjct: 321 VVQRVPVRISLDAKELQQNPLRVGLSMTVKVDI 353



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 70/186 (37%), Gaps = 11/186 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET-----TDLIDLKKVSIKNL 106
              ++V I    +G ++K   ++   + +G  L+  +D +          +L +   +N 
Sbjct: 62  VAGHLVMITPQVNGTVRKVMYDDTDVVKKGDVLVALDDSDFQLAYERAQNELIQAIRQNK 121

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLL---DFLGKYHSTCSKVFNYGISSVYRS 163
           +      K+    L +K D+     + R  + L   + +     + ++       +  ++
Sbjct: 122 QQTAVNSKAKAQVLLSKADLARAQADLRRRESLAGTEAVSGEELSHARDAVVQAQAALKA 181

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQE 220
           ++ +    ++   N + L  + ++  A+       L + +          +++ ++   +
Sbjct: 182 VEAEEVSAQAALGNNIPLRQQPAVQTAISHIKDAWLNLQRTQIRSPISGQIAKRNVQVGQ 241

Query: 221 RIVYKS 226
           RIV  +
Sbjct: 242 RIVQGT 247


>gi|94494910|ref|ZP_01301491.1| membrane fusion protein [Sphingomonas sp. SKA58]
 gi|94425176|gb|EAT10196.1| membrane fusion protein [Sphingomonas sp. SKA58]
          Length = 354

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 56/170 (32%), Gaps = 12/170 (7%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L  ++  V      + ++       +    +L+ E      +Y ++    + +     A
Sbjct: 105 RLAAEKAEVEAQIAAIEQSRAVASIDVGRTGQLFAEGLAARRDY-EQTQIKVAEANAKLA 163

Query: 275 DEMSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           +  +KL  +E  +++++   + +P  G +    + +          L  I P      + 
Sbjct: 164 EAKAKLKQIEVRQQRQSAQIVTAPRDGRVQNLNAAAGGALISAGTVLAMIAPEKIERAVE 223

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPI 373
             V  + I  V +G    + F  +   +           +   +  +DP 
Sbjct: 224 LYVDGRDIPLVNQGRPVRLEFEGFPAFQFSGWPAFAVGIYDGQVRSVDPT 273



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 61/167 (36%), Gaps = 13/167 (7%)

Query: 37  LLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE-- 91
            +P + +   +G++     +D   ++ S   G + +F V +G  +  G P++   D++  
Sbjct: 42  FVPWQQTAQGAGQVTSLDPDDRPRQVSSLVDGRVDRFFVRDGQLVQAGDPIVQVVDVDPN 101

Query: 92  -------TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
                      ++ +  +I+  R     +      L  +     + +E  + ++ +   K
Sbjct: 102 FLERLAAEKAEVEAQIAAIEQSRAVASIDVGRTGQLFAEGLAARRDYEQTQIKVAEANAK 161

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                +K+    +    R     +T  R   +  L+     +L+ A 
Sbjct: 162 LAEAKAKLKQIEVRQ-QRQSAQIVTAPRDGRVQNLNAAAGGALISAG 207


>gi|56750335|ref|YP_171036.1| ABC-transporter membrane fusion protein [Synechococcus elongatus
           PCC 6301]
 gi|81300033|ref|YP_400241.1| ABC-transporter membrane fusion protein [Synechococcus elongatus
           PCC 7942]
 gi|56685294|dbj|BAD78516.1| ABC-transporter membrane fusion protein [Synechococcus elongatus
           PCC 6301]
 gi|81168914|gb|ABB57254.1| ABC-transporter membrane fusion protein [Synechococcus elongatus
           PCC 7942]
          Length = 366

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/371 (12%), Positives = 117/371 (31%), Gaps = 84/371 (22%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSG----IIKKFQVENGSQILQGTPLLTFEDIETT 93
             ++  V + G +  E  VV++ +P SG     I   +VE G ++ +G  L   ++    
Sbjct: 54  TQVDRYVGALGRLEPEGRVVKLTAPQSGFSQARIADLRVEEGDRVSEGQILAVLDN---- 109

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                                             +    +        +    +  +++ 
Sbjct: 110 ----------------------------------QPELAAAAAAANSAVAVATADLNRIL 135

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               S+  ++ + ++ R++                 A L+  Q++    + LF+  A++ 
Sbjct: 136 AGAKSTDRQTQQQQINRIQ-----------------AELAIAQREYDRNQALFQSGAIAA 178

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             L+ +   V +   EL       ++ L  ++E   E              +++  Q   
Sbjct: 179 TALDSKRLDVERLQGEL----AVARSTLASLSEAQPE--------------EVQLAQARL 220

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A   ++            I +P AG +   +  S    +     ++++   +    + A+
Sbjct: 221 AQARAQAQEAAAQLANTVIRAPFAGQV--LRVNSRPGESGSDDGVIELA-RTDRMQVVAE 277

Query: 334 VTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEKID--PIISQQDNNLQTQEYYEV 389
           V    +  ++ G   T+   H  ++     +   I  KID   + S    +       EV
Sbjct: 278 VYETDVGRIRVGQPVTITSEHGGFSGSLTGRVALIGGKIDKKGVFSTDPASDIDSRVVEV 337

Query: 390 ILKITDLAFSD 400
            + +       
Sbjct: 338 RIDLDPSDRQK 348


>gi|319792593|ref|YP_004154233.1| hemolysin D [Variovorax paradoxus EPS]
 gi|315595056|gb|ADU36122.1| secretion protein HlyD family protein [Variovorax paradoxus EPS]
          Length = 338

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 93/296 (31%), Gaps = 9/296 (3%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L      R  +L    G +      +      ++   +     R+       L L+  S 
Sbjct: 48  LAFNANDRVAELAVREGDHVRAGQVLGRLDTRTLALRVAQSQARIGVQEQALLRLKTGSR 107

Query: 187 LLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                 +  Q        +L ++       ++Q       S  +L     ++K  L  ++
Sbjct: 108 PEEVAQAGAQVAGAQADADLAQQQLARLQGISQTTAGRAVSQQDLDSAQAKRKVALAQLD 167

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                  L      KE   D+ Q Q       + L ++     +  + +PI   +V  + 
Sbjct: 168 NARKARQLVVTGPRKE---DIAQAQAQLESARADLALMNHQLTEAELKAPIDA-VVRARL 223

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
               + A   +P   +   +   ++RA V    +  VK G  A+V          +    
Sbjct: 224 LEPGDMASPQRPAFTLA-ITDPKWVRAYVAESDLGRVKPGQAASV---STDSHPGEAIAG 279

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +  I  +       +QT+E    ++    +   D    LR G PA V     +TT
Sbjct: 280 KVGYIASVAEFTPKTVQTEELRSSLVYEIRVMVEDKQDRLRLGMPATVRLQFSDTT 335


>gi|192292585|ref|YP_001993190.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192286334|gb|ACF02715.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 386

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 92/288 (31%), Gaps = 37/288 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +  ST +++    ++S    L   +  +R ++ +    +    L  A  +  Q DL
Sbjct: 83  DVLVELDSTDARI---ELASAKAELAQAVRSVRGLFASDARSDADVRLRLAEFNKAQGDL 139

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + + L    AVS+  L      +  +   L      +   L  +N     +N       
Sbjct: 140 NVKQTLVSTGAVSRESLRHANDALSAAQAALASAQQARAQALALVNNSTLASN------- 192

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                              ++       E+  I +P++G +   +S          + +M
Sbjct: 193 -----------PPVQVAAERVRAAALAIERTKITAPVSGMVAQ-RSIQLGRRVGPGEKMM 240

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +VP     +I A     Q+  V  G  ATV    Y       +   +  I+        
Sbjct: 241 TVVPLD-RLWIDANFKEVQLHGVCVGQPATVTADIYGRSVT--YHGTVRGIEAGTGAAFA 297

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
             P  +   N ++  +   V + +       + + +  G  AEV    
Sbjct: 298 LLPAQNATGNWIKVVQRTPVRISLDPAELIQHPLRI--GMSAEVEVDT 343



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 39/124 (31%), Gaps = 2/124 (1%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             L    +L     +    W+ L     ++  + +      +V+I S  SG + +   +N
Sbjct: 18  KRLAWFGILLATTAVAAGAWAYLS--NPALRHTDDAYVGGQLVQITSEMSGAVTRILADN 75

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              +  G  L+  +  +    +   K  +      +    ++    +    +    F   
Sbjct: 76  TDWVAAGDVLVELDSTDARIELASAKAELAQAVRSVRGLFASDARSDADVRLRLAEFNKA 135

Query: 135 EEQL 138
           +  L
Sbjct: 136 QGDL 139


>gi|119355944|ref|YP_910588.1| secretion protein HlyD family protein [Chlorobium phaeobacteroides
           DSM 266]
 gi|119353293|gb|ABL64164.1| secretion protein HlyD family protein [Chlorobium phaeobacteroides
           DSM 266]
          Length = 328

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 55/158 (34%), Gaps = 13/158 (8%)

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
                    ++L   +      TI +P AG +          Y    Q L+ +V  S   
Sbjct: 176 AAAQVTMRQAELRNADLQLSYTTITAPAAGHVSKKNV-QPGQYVAPGQQLIALV-GSSEL 233

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           ++ A     Q+++++ G   T+R   Y     K+F+  +E I      +      +  + 
Sbjct: 234 WVVANFKETQLENIRTGQPVTIRVDAYP---GKEFEGRVESISSGTGARFALLPPDNASG 290

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAK 418
            + +V     +KI      D + +L  G    V    K
Sbjct: 291 NFVKVAQRVPVKILFTGKPDKDHKLAAGMNVVVEIKVK 328



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 46/143 (32%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E +V  + S   G ++   V    ++ +G  L+  +  +     D+ + +++N R  +  
Sbjct: 57  EGDVYPVISKVPGTVQSVLVRTNQEVRRGDTLVLLDPADYKVKRDMAEAALQNARASVSA 116

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
              A          L+      +      +       +       SS   +      R  
Sbjct: 117 AGEAATAAAATGQKLKSDLARSQNLRRQDVISPSEFDAVKAAALSSSAQSAAAESQHRGA 176

Query: 173 SIYLNRLDLENKSSLLRALLSSH 195
           +  +     E +++ L+   ++ 
Sbjct: 177 AAQVTMRQAELRNADLQLSYTTI 199


>gi|296158776|ref|ZP_06841605.1| efflux pump membrane protein [Burkholderia sp. Ch1-1]
 gi|295890981|gb|EFG70770.1| efflux pump membrane protein [Burkholderia sp. Ch1-1]
          Length = 415

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 87/273 (31%), Gaps = 32/273 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R ++ +    + + +  ++ LS  Q DL     + +  AVSQ
Sbjct: 103 RVALEQAEANLAQTVRQVRGLFADDNQYQAQVAQRQSDLSRAQDDLKRRLTVAQTGAVSQ 162

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +                  I   ++ ++      D A  + A+     +     N    
Sbjct: 163 EE------------------ISHARDAVKSAQAAVDAAQQQLASNRALTANTTIANHPNV 204

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+     +  +  + +P+ G +   +S           PLM IVP     ++ A 
Sbjct: 205 QAAAAKVRDAYLSNARNNLPAPVTGYVAK-RSVQVGQRVSPGTPLMAIVPLGG-VWVDAN 262

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q++H++ G    +    Y       F   +              P  +   N ++ 
Sbjct: 263 FKEVQLKHMRIGQPVELTADVYGSSV--VFHGKVVGFSAGTGSAFSLLPAQNATGNWIKV 320

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   V + +       + + +     A+V   
Sbjct: 321 VQRLPVRIALDPKELEQHPLRIGLSMQADVTIK 353



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 35/99 (35%), Gaps = 4/99 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    +G +     ++   +  G PL+  +  +    ++  + ++        
Sbjct: 62  VNGNVVQITPQVTGTVVAVNADDTQTVKAGDPLVVLDPADARVALEQAEANL----AQTV 117

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +   L   +N+Y       +S   +  D L +  +   
Sbjct: 118 RQVRGLFADDNQYQAQVAQRQSDLSRAQDDLKRRLTVAQ 156


>gi|157155084|ref|YP_001463703.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli E24377A]
 gi|157077114|gb|ABV16822.1| drug resistance MFS transporter, membrane fusion protein (MFP)
           subunit EmrK [Escherichia coli E24377A]
          Length = 387

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 77/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 93  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 152

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 153 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+   I   +S          Q LM +VP  +  ++ A   
Sbjct: 195 AADATKEAWLALKRTDIRSPVTDYIAQ-RSVQVGETVSPGQSLMAVVPA-RQMWVNANFK 252

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 253 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 310

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 311 RVPVEVSLDPKELMEHPLRIGLSMTATID 339


>gi|126660817|ref|ZP_01731912.1| Secretion protein HlyD [Cyanothece sp. CCY0110]
 gi|126617914|gb|EAZ88688.1| Secretion protein HlyD [Cyanothece sp. CCY0110]
          Length = 421

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/302 (11%), Positives = 87/302 (28%), Gaps = 42/302 (13%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL-------- 142
           E T   + +  S+       D+ + A++++     V   A  S+ E  L  L        
Sbjct: 35  EETVNFEERIPSVDVAIARTDSIRDAIEYIGTTQPVQTVALRSQVEGQLLRLTVDVGDRV 94

Query: 143 ---GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                       +    +      L    + + S         +  +  +  L   + D+
Sbjct: 95  TQGQLLAQLDDSLLQAQVGKAEAELATLNSEVISAQGEVKSAISAVASAKVQLEQAKNDV 154

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             ++ L+E+ A++  ++         +   L     E       +         + +   
Sbjct: 155 DRLQELYEEGAIALREVELARTAYLTAQQTLSSARSEVSVRQSAVEAAKGRVIAQQSLIQ 214

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +E                      ++      + SPI G ++  +   + N  Q    ++
Sbjct: 215 QE----------------------QERLSYTRLNSPITGYVLQ-RVIETGNLVQPGSEIL 251

Query: 320 KIVPHSKLTYIRAKVTPK--QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++      + ++  V      + +++ G +  VR   +       F   +  I P     
Sbjct: 252 RL---GDFSQVKVVVPVSELDLANIRSGQSVRVRLDAFPRD---SFVGRVSNISPAADPT 305

Query: 378 DN 379
             
Sbjct: 306 SR 307



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/144 (11%), Positives = 47/144 (32%), Gaps = 5/144 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDF 119
           G + +  V+ G ++ QG  L   +D      +   +  +  L         + + +    
Sbjct: 81  GQLLRLTVDVGDRVTQGQLLAQLDDSLLQAQVGKAEAELATLNSEVISAQGEVKSAISAV 140

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            + K  + +   +    Q L   G       ++      +  ++L    + +        
Sbjct: 141 ASAKVQLEQAKNDVDRLQELYEEGAIALREVELARTAYLTAQQTLSSARSEVSVRQSAVE 200

Query: 180 DLENKSSLLRALLSSHQKDLTMMK 203
             + +    ++L+   Q+ L+  +
Sbjct: 201 AAKGRVIAQQSLIQQEQERLSYTR 224


>gi|194336694|ref|YP_002018488.1| efflux transporter, RND family, MFP subunit [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194309171|gb|ACF43871.1| efflux transporter, RND family, MFP subunit [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 417

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 53/149 (35%), Gaps = 14/149 (9%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKL 327
           T A   S L   +    +  + +PI GTI+   S                ++++  +   
Sbjct: 170 TIAQNKSLLDQNQDRMNKTVVRAPINGTIIALNSKPGERVVGTGQFPGTEVLRLA-NLDS 228

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-PIISQQDNNLQTQEY 386
             +  +V    I +VK G   ++    Y D     F+ ++ +I    ISQ          
Sbjct: 229 MQVEVEVNENDIVNVKTGNPVSITVDAYGDRI---FRGVVHEISNSAISQAAGTQDEVTN 285

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + V ++I      +++  L+ G  A    
Sbjct: 286 FSVKIRI-----FNHDRMLKPGMSATADI 309



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 54/157 (34%), Gaps = 3/157 (1%)

Query: 43  SVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            V+++G+I     +V   SP  SG I +  + +G  + +G  L   +     + ++    
Sbjct: 53  IVTATGKIEPA--LVVAMSPDVSGEIIELPIRDGQSVEKGELLFKIQPDLYVNQVEQSLA 110

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            + + +      ++      + +      ++ +     D++    +  +    Y  S   
Sbjct: 111 QLNSAKSQSMETRARKLKAEDDFHKASLLYKEKLISESDYITSRTNAQAAQAAYQASIYT 170

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +    L       +N+  +    +     L+S   +
Sbjct: 171 IAQNKSLLDQNQDRMNKTVVRAPINGTIIALNSKPGE 207


>gi|294666812|ref|ZP_06732045.1| multidrug resistance efflux pump [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292603396|gb|EFF46814.1| multidrug resistance efflux pump [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 362

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 88/305 (28%), Gaps = 29/305 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V + A   R + L     + ++   +     + +   +L     +  S      +  
Sbjct: 76  QVPVQDFAHVKRGQLLARIDDRIYAQQLEQAKAQVQTAQANLANWDQQRHSAEATIAEQR 135

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  +A     +      + L  +  VS+ D               R+     +    
Sbjct: 136 AALSSNQAQRDRTRSAYARTQQLASQQLVSEQD---------------RDTAFAARAQAE 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                   A        + +S +    +   A+  + + + +   +   IL+P  G +  
Sbjct: 181 AGVAQARAAVQAAEENARSVSVNRAALEAAVANAQAAVQLAQINLDNTRILAPRDGQLGQ 240

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP     +I A     Q+  ++ G  A+       + R   
Sbjct: 241 LGVR-QGAYVTNGTQLMSLVP--DTLWIVANFKETQMARIRIGQRASFTVDALDNAR--- 294

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVL 414
               ++ I P    +      +  T  + ++  +I      D +      LR G    V 
Sbjct: 295 LHGRVQDISPAAGSEFSVLPADNTTGNFVKIAQRIPLRISVDPDQPLAPRLRPGMSVVVT 354

Query: 415 FTAKN 419
               +
Sbjct: 355 VETDS 359



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 56/174 (32%), Gaps = 18/174 (10%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSI-----------LLPIEISVSSSGEILNE 53
           M      + PA  +R     + GI+G    ++           L P   ++  +   +  
Sbjct: 1   MNTPADSSPPADRQRRRRRRLAGIVGFGGLALIGVALVLYAWRLPPFVSAIERTENAMVH 60

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             +  I    SG + +  V++ + + +G  L   +D        +    ++  +  + T 
Sbjct: 61  GQITVIAPQVSGYVTQVPVQDFAHVKRGQLLARIDD-------RIYAQQLEQAKAQVQTA 113

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           ++ L   + +    E     +   L     +   T S        +  + +  +
Sbjct: 114 QANLANWDQQRHSAEATIAEQRAALSSNQAQRDRTRSAYARTQQLASQQLVSEQ 167


>gi|323137864|ref|ZP_08072939.1| secretion protein HlyD family protein [Methylocystis sp. ATCC
           49242]
 gi|322396867|gb|EFX99393.1| secretion protein HlyD family protein [Methylocystis sp. ATCC
           49242]
          Length = 331

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 86/294 (29%), Gaps = 31/294 (10%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            +    + +   LL  +       ++       + + +    L    +       L+   
Sbjct: 56  AVAAGAQVKAGDLLFVMTTTLLERARAEAGARIAQFEAQVENLQAAMNRPQQIAVLQAAL 115

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L   Q+D    + LF +  V++  L++      +    ++E   + +       
Sbjct: 116 ERAEASLKLSQEDYQRQRKLFAEGHVAKAALDRAVMARSRDEASVKEARRQVEVAQ---- 171

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                        +   S+++E  +       ++   L+    ++++ +P  G I     
Sbjct: 172 -------------MASRSQEIEAAEAAIKQARAQQQALDIRIRRQSVTAPADGVIQDV-F 217

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK--- 362
           F      +  QP++ ++P      +R  V   Q+  VK G    +      D    +   
Sbjct: 218 FRPGEVVKAGQPVVALLPPENR-KVRFYVGEPQLARVKLGERVKIECDGCPDDLYGRISF 276

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN-GFPAEVLF 415
                E   P+I                L     A  +        G PA V  
Sbjct: 277 ISGRQEYTPPVIFSDQE--------RAKLVFKAEARLEGRARELPLGLPASVTI 322


>gi|83749166|ref|ZP_00946169.1| Hypothetical Protein RRSL_00823 [Ralstonia solanacearum UW551]
 gi|207739406|ref|YP_002257799.1| cation transporter protein [Ralstonia solanacearum IPO1609]
 gi|83724162|gb|EAP71337.1| Hypothetical Protein RRSL_00823 [Ralstonia solanacearum UW551]
 gi|206592781|emb|CAQ59687.1| cation transporter protein [Ralstonia solanacearum IPO1609]
          Length = 388

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 22/192 (11%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF------ADEMSKLTILEKTR 287
           I  QK  L  +N           +   +  + ++              E++++       
Sbjct: 138 ISAQKEYLLALNTARTLQGSTMKDLQDDAQQTVQSAAGRLHVLGLTDAEIAQIRARGTPA 197

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           E   + +PI+GTIV  ++     +       M IV  ++  +    V    I  V+ G  
Sbjct: 198 EHLILRAPISGTIVK-RNMDPGAFLNVGDSFMSIV-DTRALWFTGNVYENDIARVRIGQP 255

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            T+R   Y D     F   +  I P I    + L       V   +      + +  LR 
Sbjct: 256 ITLRTAAYPDR---AFTGTVSFIAPNIDAATHTLT------VRCDVP-----NPDGLLRP 301

Query: 408 GFPAEVLFTAKN 419
              +        
Sbjct: 302 EMYSTARIQTGQ 313


>gi|332978038|gb|EGK14778.1| HlyD family secretion protein [Psychrobacter sp. 1501(2011)]
          Length = 352

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 80/230 (34%), Gaps = 17/230 (7%)

Query: 10  KRNHPASLKRMTL-LSIIGIIGLITWSILLPIEIS---VSSSGEILNEDNVVEIKSPFSG 65
           K+  P  ++ + L L ++G+IG+I + +    E +   +   G++  E     I +   G
Sbjct: 5   KKPSPTMIRNIVLTLVLVGVIGVIIYGLNKSTESTEKPIVVQGQM--EMQSTAIAAKVPG 62

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I    V  G  +  G  L+  +  E T  ++    +    +  +D  ++          
Sbjct: 63  RISNIMVTEGDTVKVGQQLIEMDSPEITAKMNQALAARDMAQSQLDKAENGA-------- 114

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
              +  E  + +      +  +  +K     +  +Y+   M   +    Y   +  ++K+
Sbjct: 115 ---RPQEIGQAKAAWQANQAAADLAKSTFERVDRLYQEGLMARQKRDEAYTQYVANQDKA 171

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
              R      Q+          K  V+Q D   QE    +    L+  I 
Sbjct: 172 DAARLQYELAQEGARGEDKEAAKAQVAQVDGKIQEAQAAQDEANLKSPIS 221



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 81/300 (27%), Gaps = 13/300 (4%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +  +   +      R   ++   G       ++       +   +   L           
Sbjct: 49  MEMQSTAIAAKVPGRISNIMVTEGDTVKVGQQLIEMDSPEITAKMNQALAARDMAQSQLD 108

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             EN +       +              K+   + D   QE ++ +   +  E   +   
Sbjct: 109 KAENGARPQEIGQAKAAWQANQAAADLAKSTFERVDRLYQEGLMARQKRD--EAYTQYVA 166

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                +    +  L       E   D E  +   A    K+   +  +++  + SPI+G 
Sbjct: 167 NQDKADAARLQYELAQEGARGE---DKEAAKAQVAQVDGKIQEAQAAQDEANLKSPISGI 223

Query: 300 IVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY--- 355
           +             Q  P+M +V P+ +   I   VT   +     G     + P     
Sbjct: 224 VDDVIVN-PGEVIGQGVPIMTLVDPNDQWVVI--NVTENLLNQFSIGKEFVGKVPALSSP 280

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               +  FK                  T++  +V         +  + ++R+G    V  
Sbjct: 281 DHSYQMTFKVFNTAAMSD-FATWRATNTEDNLDVRTFEVKARPTKADTKIRSGMSVVVEI 339


>gi|332283777|ref|YP_004415688.1| hypothetical protein PT7_0524 [Pusillimonas sp. T7-7]
 gi|330427730|gb|AEC19064.1| hypothetical protein PT7_0524 [Pusillimonas sp. T7-7]
          Length = 393

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 83/275 (30%), Gaps = 28/275 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-------LF 206
              +     +L   + R R+I++    LE   ++  A +   + DL   +N       L 
Sbjct: 89  RIALKQAEAALAQAVRRTRTIFVQNSALEADIAIRAANIKRAEVDLAKARNDLKRRQTLA 148

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
               VS  ++   +  V  +   L +           +                ++ +  
Sbjct: 149 SSGGVSGEEILHAQTAVKAAESGLAQAKAAHAASQAKLQTNLALTAGTSIEAHPDVMQAA 208

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           +Q ++ +               +  + +P+ G I   +S     +     PLM IVP  +
Sbjct: 209 DQLRKAWLAN-----------SRTRLPAPVDGMIAQ-RSVQVGQHVAPGTPLMTIVPL-Q 255

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR--EKKFKAI-IEKIDPIISQQDNNLQT 383
             ++ A     Q++ +K G  AT+    Y          + +              N   
Sbjct: 256 QVWVEANFKEGQVRRMKPGQQATLTADLYGSSVVYHGTLQGLAAGTGSAFALLPAQNASG 315

Query: 384 Q-----EYYEVILKITDLAFSDNNIELRNGFPAEV 413
                 +   V + +     + + + +      EV
Sbjct: 316 NWIKVVQRIPVRIVLDPDELAAHPLRVGLSMQVEV 350



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 48/155 (30%), Gaps = 3/155 (1%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
               R  P  +    +   IG+   I W +         S+ +     N+V++ S   G 
Sbjct: 6   AAASRRKPLLILATAIFIAIGVAYAIWWFLFA---SGYESTEDAYVHGNLVQVTSQIPGT 62

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +     ++   + +G+ L+  +D +T   +   + ++        T       L     +
Sbjct: 63  VIAIGADDTQTVSKGSLLIELDDSDTRIALKQAEAALAQAVRRTRTIFVQNSALEADIAI 122

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                +  E  L           +   + G+S   
Sbjct: 123 RAANIKRAEVDLAKARNDLKRRQTLASSGGVSGEE 157


>gi|294637652|ref|ZP_06715931.1| multidrug resistance protein A [Edwardsiella tarda ATCC 23685]
 gi|291089207|gb|EFE21768.1| multidrug resistance protein A [Edwardsiella tarda ATCC 23685]
          Length = 391

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 66/218 (30%), Gaps = 22/218 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +    + +  LS    D      L    A+ +
Sbjct: 99  QQAYERAKTALANSVRQTHQLMVNAKQYQANIVVNQVALSKASSDYQRRLALSRSGAIGR 158

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L   +  +  +   L   I +       I     E          ++           
Sbjct: 159 EELQHAQDAMESARAALDVAIQQYNANQALILNTPLEKQPAVLQAAAQVRDAWL------ 212

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I SP+ G +   +S         + PLM +VP +   ++ A 
Sbjct: 213 ------------ALERTQIRSPVTGYVSQ-RSVQVGAQISPNTPLMAVVPAN-QMWVDAN 258

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               Q+ +++ G  ATV    Y D     ++  +  +D
Sbjct: 259 FKETQLANMRIGQPATVVSDMYGDKV--VYQGKVVGLD 294



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 65/175 (37%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N+V+I +  SG + +   E    +  G  L+T +  +     +  K ++ N      
Sbjct: 58  VTGNLVQINAQVSGSVTQVNFEGTDLVKAGDVLVTLDKTDAQQAYERAKTALANSVRQTH 117

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  ++ ++   + + N+  + + + + +    L   G       +     + S   +L +
Sbjct: 118 QLMVNAKQYQANIVVNQVALSKASSDYQRRLALSRSGAIGREELQHAQDAMESARAALDV 177

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
            + +  +     L+  LE + ++L+A        L + +          VSQ  +
Sbjct: 178 AIQQYNANQALILNTPLEKQPAVLQAAAQVRDAWLALERTQIRSPVTGYVSQRSV 232


>gi|225868046|ref|YP_002743994.1| bacteriocin secretion protein [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701322|emb|CAW98345.1| bacteriocin secretion protein [Streptococcus equi subsp.
           zooepidemicus]
          Length = 452

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/416 (14%), Positives = 140/416 (33%), Gaps = 36/416 (8%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S     EI+V+S GEI     +  ++S  +  I    + N   I QG  ++ +      D
Sbjct: 38  SCFAYKEITVTSYGEITPTQVIATVQSISNNPIVANHLINNQPIKQGDSIIQY----AKD 93

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           L + +K  ++      + +KS+L+ L       +  F++ ++        +  + ++  +
Sbjct: 94  LEESQKQVLEKQLATYEKQKSSLNTLLLSLKQGQNLFQNDDQFGYVNTFNHFMSQAQDID 153

Query: 155 YGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSS-----------HQKDL 199
            G S +      +   ++    +I      +  + +    L ++           +    
Sbjct: 154 LGFSKIKAETSQQAQLIQDSIVAINQQINGISQQIADYEELRAAVINQSNSLSSNNPHQA 213

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-------NELYDEAN 252
           T+   L +     +   NQ    + +S L L+ ++        ++       N L  +  
Sbjct: 214 TLDAYLSQSQTDQEAATNQLLFQIDQSLLSLKASMDSLNKQRANLHQSTSYDNSLNTKLE 273

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           +    +L   S+ L        +  ++L           I +P +G +  N +F      
Sbjct: 274 ILRTQFLITASQQLTDVSHHITELKAQLEQATLQINNLVIKAPKSGIVQLNSAFEGKTSI 333

Query: 313 QQSQPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                +  I P    +K   I   ++ + +  +KK     +    + +         I+ 
Sbjct: 334 PIGHDIAYIYPSLKQTKQALITYHISSEYVSLLKKNQIVRLALDRHGNQPI-VITGTIKT 392

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           ID + ++          ++V  K+T       +  ++ G    V+      T    
Sbjct: 393 IDELATKTKQGNL----FKVTAKLT--LSEKESTTIQYGQQGRVISVIAKKTFFDF 442


>gi|207724737|ref|YP_002255134.1| cation transporter protein [Ralstonia solanacearum MolK2]
 gi|206589960|emb|CAQ36921.1| cation transporter protein [Ralstonia solanacearum MolK2]
          Length = 388

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 22/192 (11%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF------ADEMSKLTILEKTR 287
           I  QK  L  +N           +   +  + ++              E++++       
Sbjct: 138 ISAQKEYLLALNTARTLQGSTMKDLQDDAQQTVQSAAGRLHVLGLTDAEIAQIRARGTPA 197

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           E   + +PI+GTIV  ++     +       M IV  ++  +    V    I  V+ G  
Sbjct: 198 EHLILRAPISGTIVK-RNMDPGAFLNVGDSFMSIV-DTRALWFTGNVYENDIARVRIGQP 255

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            T+R   Y D     F   +  I P I    + L       V   +      + +  LR 
Sbjct: 256 ITLRTAAYPDR---AFTGTVSFIAPNIDAATHTLT------VRCDVP-----NPDGLLRP 301

Query: 408 GFPAEVLFTAKN 419
              +        
Sbjct: 302 EMYSSARIQTGQ 313


>gi|197103489|ref|YP_002128866.1| HlyD family secretion protein [Phenylobacterium zucineum HLK1]
 gi|196476909|gb|ACG76437.1| HlyD family secretion protein [Phenylobacterium zucineum HLK1]
          Length = 379

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 60/195 (30%), Gaps = 19/195 (9%)

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               D   ++        +  +  + +  +  + L+    + +   +     +    A  
Sbjct: 114 RQVDDKARLEQALIAQRAAAVESARADAQLASAELKRYGALAQSGWVSSQRAQSVRTAEQ 173

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEK--------------TREQKTILSPIAGT 299
             +  +++ +  LE  +RT A   S                        +  + +P+AG 
Sbjct: 174 RASAAVEQAAAALEAERRTAASLDSARAQSLAQAAAARAAVEQARIDLARTEVRAPVAG- 232

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +V  +      Y +    LM +VP      + A     Q+  ++ G    +R   +    
Sbjct: 233 VVGARGVRPGQYVRPGGALMSLVPLGDAYVV-ANFKETQVARLRIGQPVEIRADAFGK-- 289

Query: 360 EKKFKAIIEKIDPII 374
            K  +  ++   P  
Sbjct: 290 -KTLQGRVDSFAPAT 303



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/127 (8%), Positives = 37/127 (29%), Gaps = 7/127 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + + V +     G + +  V +   +  G  L+  +       +   + +   L   + 
Sbjct: 55  VQADTVTVAPLVEGYVAEVLVSDNEAVRPGQVLVRIDPATIKARLAQAEANAAALEAAVR 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                   +++K  + +     R   +           +++  YG  +    +  +  + 
Sbjct: 115 Q-------VDDKARLEQALIAQRAAAVESARADAQLASAELKRYGALAQSGWVSSQRAQS 167

Query: 172 RSIYLNR 178
                 R
Sbjct: 168 VRTAEQR 174


>gi|292489186|ref|YP_003532073.1| multidrug resistance protein A [Erwinia amylovora CFBP1430]
 gi|292900304|ref|YP_003539673.1| multidrug resistance protein A [Erwinia amylovora ATCC 49946]
 gi|291200152|emb|CBJ47278.1| multidrug resistance protein A [Erwinia amylovora ATCC 49946]
 gi|291554620|emb|CBA22286.1| Multidrug resistance protein A [Erwinia amylovora CFBP1430]
          Length = 390

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 84/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +        +L   + +   + +N    +    L +  L   Q DL   + L     + +
Sbjct: 98  DQAFEKAQTALATSVRQTHQLIINGKQYQATIELQKTALEQAQADLRRREPLGAAKLLGK 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            DL      V  +   L   + +       I     E                  NQ   
Sbjct: 158 EDLQHARDAVATAKARLDVAMQQYNANQAMILNTSLE------------------NQPAV 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L     T ++ T++SPI G +   +S    +    + PL+ IVP +   ++ A 
Sbjct: 200 KQSAAQLRDAWLTLQRTTVVSPIDGYVSR-RSVQVGSQISSTTPLLAIVPANN-LWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+  ++ G  ATV    Y D     +   +  +D          P  +   N ++ 
Sbjct: 258 FKETQLAGMRIGQPATVVSDIYGDDV--VYHGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
                V + +     + + + +
Sbjct: 316 VRRLPVRIALDAQEVAKHPLRI 337


>gi|190571583|ref|YP_001975941.1| efflux transporter, RND family, MFP subunit [Wolbachia endosymbiont
           of Culex quinquefasciatus Pel]
 gi|190357855|emb|CAQ55312.1| efflux transporter, RND family, MFP subunit [Wolbachia endosymbiont
           of Culex quinquefasciatus Pel]
          Length = 360

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 20/213 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE-- 267
           A+  +D  + +R      +E  + + + +     +N+   E +       K     +   
Sbjct: 95  AIYLSDGEKVKRGDVILKIEDYDRVEQVEKAKALLNQREIEYDSSRKLNTKGYGAQIRVE 154

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
                     + L  L+   E   I SPI G +         ++      +  IV   ++
Sbjct: 155 SAFTALQSAKADLKRLQLDLENTAIKSPIDGYVDKINVN-EGDFVNLGHKITDIVNFDQV 213

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +   V+  ++  +K G TA +       +  ++    +  I  I   +  +      Y
Sbjct: 214 LVV-LYVSENEVNKIKLGSTAQINL-----LDGRELVGEVSFISKIAEPKTGS------Y 261

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            V +K+TD       I L+ G  A V   +   
Sbjct: 262 RVEVKVTDNEI----ISLQ-GLTASVSLPSGER 289



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 50/151 (33%), Gaps = 1/151 (0%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG +    +   + S  SG +    + +G ++ +G  +L  ED +  + ++  K  +   
Sbjct: 74  SGTVNP-LHRFSLVSRTSGQVIAIYLSDGEKVKRGDVILKIEDYDRVEQVEKAKALLNQR 132

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
               D+ +            +E AF + +    D         +      I      + +
Sbjct: 133 EIEYDSSRKLNTKGYGAQIRVESAFTALQSAKADLKRLQLDLENTAIKSPIDGYVDKINV 192

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                 ++     D+ N   +L  L  S  +
Sbjct: 193 NEGDFVNLGHKITDIVNFDQVLVVLYVSENE 223


>gi|242279261|ref|YP_002991390.1| efflux transporter RND family, MFP subunit [Desulfovibrio
           salexigens DSM 2638]
 gi|242122155|gb|ACS79851.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           salexigens DSM 2638]
          Length = 731

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 72/220 (32%), Gaps = 40/220 (18%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +  +  EL + +  +  +     ++  +         +E  R L  ++    + + +  
Sbjct: 175 ELLTAQAELIQAVKAKSALKGSSLKVVKDTAARTEQAAREKLRLLGLSKSQIENIIKRGK 234

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL-TYIRAKVTPKQIQ 340
             E      T+ SP++G ++         Y +   P+  I   S++   + A  +   + 
Sbjct: 235 AAE----HITLYSPMSGIVIKKDVV-EGVYVKTGTPIYTIADLSRVWVILEAYES--DLP 287

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            +K G   +     Y     K F+  +  IDP+++++           V +++      +
Sbjct: 288 WIKMGMKVSFNTEAYP---GKNFEGKVVYIDPVVNEKTRT--------VRVRL---EVPN 333

Query: 401 NNIELRNGF------------------PAEVLFTAKNTTL 422
             ++L+ G                   PA          +
Sbjct: 334 KGLKLKPGMFVRAVNKEEKQAGTELVIPASAPLITGKRAV 373


>gi|213022019|ref|ZP_03336466.1| multidrug resistance protein A [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 307

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N   L+    + +  L+  Q DL     L   N + + 
Sbjct: 16  QAFERAKTALASSVRQTHQLMINSKQLQANIDVQKTALAQAQSDLNRRVPLGNANLIGRE 75

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L      V  +  +L   I +       I     E          E+            
Sbjct: 76  ELQHARDAVASAQAQLDVAIQQYNANQAMILNSNLEDQPAVQQAATEVRNAWL------- 128

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        E+  I+SP+ G +   ++         + PLM +VP +   ++ A  
Sbjct: 129 -----------ALERTRIVSPMTGYVSR-RAVQPGAQISPTTPLMAVVPATD-LWVDANF 175

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+ +++ G   T+    Y D    K+   +  +D          P  +   N ++  
Sbjct: 176 KETQLANMRIGQPVTIITDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVV 233

Query: 385 EYYEVILKITDLAFSDNNIEL 405
           +   V +++       + + +
Sbjct: 234 QRLPVRVELDARQLEQHPLRI 254


>gi|254430823|ref|ZP_05044526.1| secretion protein HlyD [Cyanobium sp. PCC 7001]
 gi|197625276|gb|EDY37835.1| secretion protein HlyD [Cyanobium sp. PCC 7001]
          Length = 350

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 83/246 (33%), Gaps = 27/246 (10%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            +  +L ALL      +   + L    +    + + + +  +  +  EL  +  E +   
Sbjct: 54  KRQGVLEALLVEEGDVVRAGQPLARMDSGDLADRIRELQAQLRSAQAELMRSRSELER-- 111

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
              NE          +    +      +Q +      +L      +    + +P +G I 
Sbjct: 112 ---NERLFRQQAISLSDYNTVRSTYLVDQASVEAARQRLAARRVEQADLVVRAPFSGVIT 168

Query: 302 YNQSFSSSNYAQQSQPLMK--------IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
             +      +   +             IV  ++   + AKV    I  ++ G  A VR  
Sbjct: 169 Q-RYADPGAFVTPTTTASATAGATSSSIVELAQGLEVVAKVPESDIGRIRLGQEADVRVD 227

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            + D R     A++ +I P   + +N       ++VIL+     FS    +LR G  A+V
Sbjct: 228 AFPDRRY---AAVVRRITPRAVKVNNVTS----FDVILR-----FSREQPDLRIGMTADV 275

Query: 414 LFTAKN 419
            F    
Sbjct: 276 NFKTGQ 281



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +   VS+SGE+  E   V +     G+++   VE G  +  G PL   +  +  D
Sbjct: 28  AKSGDLPGLVSASGELDAE-KRVNVSPKRQGVLEALLVEEGDVVRAGQPLARMDSGDLAD 86

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDF 119
            I   +  +++ +  +   +S L+ 
Sbjct: 87  RIRELQAQLRSAQAELMRSRSELER 111


>gi|186473793|ref|YP_001861135.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
 gi|184196125|gb|ACC74089.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
          Length = 358

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 90/321 (28%), Gaps = 10/321 (3%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L  + DTE +   ++   + ++      +  Q+L    +       +       +  +L 
Sbjct: 31  LLANPDTESTNDAYVVADFTLVAPRISGQISQVLVEDNQQVKAGQLMVRLDDRDLQAALL 90

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                + +      + + + +   +L+   +  L   +        +             
Sbjct: 91  SARADVAAAKAAVANDDAEIARHPSLVDQARATLRSDEASISFARANAARYQNLSDAGAG 150

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +T E +         L    + +D A L       ++ R                    K
Sbjct: 151 TTQEQQHAASALAEQLAQ--QAHDRAALAATEQNLDVLRTQRDKAAGALARAEAALAQAK 208

Query: 286 -TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
                  I +P+ G +   +S     +     PL+ IVP S    + A     QI H++ 
Sbjct: 209 LNLSYTEIHAPVDGKV-GRRSVRVGAFVTPGAPLLAIVPLSSAYVV-ANFQENQITHMRP 266

Query: 345 GYTATVRFPHYADIREKK-----FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           G    ++   +  +  +        A      PI         T+    V +KIT     
Sbjct: 267 GENVRIKVDSFPGVVIRGHIDSLAPATGVSFAPIAPDNATGNFTKVVQRVPVKITIDPGQ 326

Query: 400 DNNIELRNGFPAEVLFTAKNT 420
           +    L  G   E        
Sbjct: 327 EAASALSVGLSVEAEVAVSKR 347



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 40/136 (29%), Gaps = 2/136 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I +  VE+  Q+  G  ++  +D +    +   +  +   +  +  + + +    + 
Sbjct: 57  SGQISQVLVEDNQQVKAGQLMVRLDDRDLQAALLSARADVAAAKAAVANDDAEIARHPSL 116

Query: 124 YDVLEKAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            D       S E  +         +   S            +      ++     +R  L
Sbjct: 117 VDQARATLRSDEASISFARANAARYQNLSDAGAGTTQEQQHAASALAEQLAQQAHDRAAL 176

Query: 182 ENKSSLLRALLSSHQK 197
                 L  L +   K
Sbjct: 177 AATEQNLDVLRTQRDK 192


>gi|253991492|ref|YP_003042848.1| hypothetical protein PAU_04019 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|211638370|emb|CAR66992.1| putative membrane protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782942|emb|CAQ86107.1| putative membrane protein [Photorhabdus asymbiotica]
          Length = 323

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 58/409 (14%), Positives = 127/409 (31%), Gaps = 106/409 (25%)

Query: 17  LKRMTLLSIIGIIGLITWSILLP-------IEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +K+ TL +I+ +I L   ++L         ++  V +  E++             G +  
Sbjct: 1   MKKRTLFTILLVILLTAMAVLFRSHNQYLLLQGEVDAP-EVIVASKAK-------GRVIA 52

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             VE G  +  G  L+T E+ E           +      ++  +               
Sbjct: 53  RHVERGDDVKAGQLLITLENPE-----------LLAQVASLEAARDQAK----------- 90

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                                       + + +SL            +  +LE   +  +
Sbjct: 91  ----------------------------AQLEQSLHGTREE------SIRNLEAGLAQAQ 116

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A   +  ++   ++N+  K  VS N+L+   R    +  +++         +        
Sbjct: 117 AEYDNAMREYNRIQNIASKGYVSPNELDNARRSRDVAYQKMQGAKAALDEGMHG---DRI 173

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E   ++   L++  + L + Q    D +              + +P+AG +    +    
Sbjct: 174 EIRQKYEAALRQAEQQLIELQTQSDDLL--------------VKAPVAGEVGPIPA-EVG 218

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFPHYADIREKKFKAIIE 368
                + PL+ +V   +  ++      + I   V+KG    +  P   D   K+ +A + 
Sbjct: 219 ELFNANSPLVTLVRVPEAYFV--YNLREDILAKVRKGDKVKLCVPALGD---KEIEAEVR 273

Query: 369 KIDP--IISQQDNNLQTQEY----YEVILKITDLAFSDNNIELRNGFPA 411
            I      + +     T ++    +EV L             LR G  A
Sbjct: 274 YISSMGDYATKRATRATGDFDLRTFEVRLYPVQPIEG-----LRPGMSA 317


>gi|153953283|ref|YP_001394048.1| EmrA-related transporter protein [Clostridium kluyveri DSM 555]
 gi|219853916|ref|YP_002471038.1| hypothetical protein CKR_0573 [Clostridium kluyveri NBRC 12016]
 gi|146346164|gb|EDK32700.1| EmrA-related transporter protein [Clostridium kluyveri DSM 555]
 gi|219567640|dbj|BAH05624.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 326

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/349 (12%), Positives = 106/349 (30%), Gaps = 93/349 (26%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V+ GS++ +G  ++  +  +    +D                ++       K ++
Sbjct: 65  VSEISVDLGSKVNEGDVIIKLDTTDLQGQVD----------------QAQAALNTAKANL 108

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                 +R EQ+                                           +   +
Sbjct: 109 TNAQNSTRPEQIA----------------------------------------QAQASLN 128

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                  + +K+   ++ L  + A +Q +L                   +  N      E
Sbjct: 129 SASQSYQTVKKNYDRVQALLNEGAATQQEL-------------------DTANQQLSAAE 169

Query: 247 LYDEANLEFANYLKE--ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
              +   E  N L        ++  Q       + L   + +     I +PI+G +    
Sbjct: 170 AQYKTAQEQLNMLNNGPTKSSIDVYQAQITQAQAALKTAQTSLNNAIITAPISGIVNARN 229

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                + A   + L+ I+ ++   Y+ A      I  + +G +   +     D   K+F 
Sbjct: 230 IN-VGDIASTDKVLVSII-NTNNLYVNAYAPADIISKISEGQSVIAKVSEIPD---KEFH 284

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             I  I+  ++ Q  +        +++K+T    +D +  L+ G  AE+
Sbjct: 285 GKIAVINSTLNSQSRD--------ILVKVT---LTDKDTNLKPGMFAEI 322


>gi|291333752|gb|ADD93437.1| hypothetical protein [uncultured marine bacterium
           MedDCM-OCT-S04-C109]
          Length = 339

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 81/231 (35%), Gaps = 40/231 (17%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQK--------NMLRHINELYDEANLEFANYL- 259
             VS  ++ +QE    K++ +++    E +        ++L       DEA ++      
Sbjct: 2   GFVSDLEVLRQESSRDKASHQIKVLKAELEAYIKYDQVSLLSVKELTVDEARVQIEKQKV 61

Query: 260 ------KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                 ++   ++  N+RT   E  KL  L +      I +P  GT++Y          +
Sbjct: 62  LNAANTRDALSNVVTNERTLELEKEKLIDLNEQMANTKIYAPQDGTVLYWSDR-----WK 116

Query: 314 QSQPLMK----------I-VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           + +P+M+          I +P +    +   V   + + +            Y ++ + K
Sbjct: 117 RGEPIMEGSKVYKGQNLIKLPRTSSLKVDLSVPQAKRKQLYLNMRV------YVEVEDVK 170

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
               +  +   +         + Y++  + I   +F D+  E   G    V
Sbjct: 171 LPGTLTFLSATVDTNRRGHTEKSYFKAEVSIDSSSFPDSVSE---GMAVTV 218


>gi|260424910|ref|ZP_05733694.2| HtpX protein [Dialister invisus DSM 15470]
 gi|260403611|gb|EEW97158.1| HtpX protein [Dialister invisus DSM 15470]
          Length = 329

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 93/281 (33%), Gaps = 34/281 (12%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR--SIYLNRLDLENKSSLLRALLSSHQK 197
           D L +  +   ++      +V    +  + ++   S          +   L A  ++ + 
Sbjct: 74  DVLARLDTRPLELAIAQKKAVIAQQEAVVAKLHNGSRPEEITQAAAQVESLAAAENNARA 133

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
               M +L    AVS+   +  E     +   L           +   +           
Sbjct: 134 YYRRMASLLADGAVSRQSADDAEARWKAAAANLENAKAALSLANKGPRD----------- 182

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                  D+   +   +   + L        Q T+++P  G I  ++   + + A  ++P
Sbjct: 183 ------EDIAAAEAQLSALKAGLENDLYNLSQATLVAPQDGVI-RSRLMETGDMASAARP 235

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--- 374
           +  ++  S   +IRA V   ++  +++G  A V    + +      K  +  I       
Sbjct: 236 V-YLIGLSDPKWIRAYVPESRLGELREGMEADVYVDSFPNE---AVKGKVGYISDTAEFT 291

Query: 375 --SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             S Q   L+T   YEV + + D         LR G PA V
Sbjct: 292 PKSVQTEELRTSLLYEVRIFVDDEE-----NRLRMGMPATV 327



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 113/342 (33%), Gaps = 27/342 (7%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK-SP---FSGIIKKFQVE 73
           ++  +++++ +I     +     +   +  G ++   NV   + S     +G I++   E
Sbjct: 8   RKSVIIAVVLVIAFA--AGYFFYKSRNAEQGRLILYGNVDIRQISLAFNSNGRIEEMLKE 65

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L   +    T  ++L     K +    +   + L   +   ++ + A + 
Sbjct: 66  EGDAVKAGDVLARLD----TRPLELAIAQKKAVIAQQEAVVAKLHNGSRPEEITQAAAQV 121

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                 +   + +           +   +S      R ++   N  + +   SL      
Sbjct: 122 ESLAAAENNARAYYRRMASLLADGAVSRQSADDAEARWKAAAANLENAKAALSLANKG-P 180

Query: 194 SHQKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
             +        L    A  +NDL    Q  +V      +R  + E  +M      +Y   
Sbjct: 181 RDEDIAAAEAQLSALKAGLENDLYNLSQATLVAPQDGVIRSRLMETGDMASAARPVY--- 237

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            L   +  K I   + +++     E  +  +   +   + +   + G I     F+  + 
Sbjct: 238 -LIGLSDPKWIRAYVPESRLGELREGMEADVYVDSFPNEAVKGKV-GYISDTAEFTPKSV 295

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQH-VKKGYTATVRF 352
             Q++ L              ++     ++ ++ G  ATV+F
Sbjct: 296 --QTEEL------RTSLLYEVRIFVDDEENRLRMGMPATVKF 329


>gi|168704470|ref|ZP_02736747.1| probable membrane-fusion protein [Gemmata obscuriglobus UQM 2246]
          Length = 462

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/375 (13%), Positives = 112/375 (29%), Gaps = 76/375 (20%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+      G +    +  ++ S  SG + +  V  GS++ +G  L           +  +
Sbjct: 64  IDRVCVQPGTVEPFQSA-DLYSKVSGFLAEQTVNIGSRVQKGDVLARI-------AVPEQ 115

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  ++  R  ++  ++                                         +  
Sbjct: 116 EKQVERDRARLNAAEA----------------------------------------KVRQ 135

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V   +    +  +S   +    +       +     +K LT  K+L ++ A+    +++Q
Sbjct: 136 VEAHVLAAESEAKSADASVALAKAMVRAKGSYRQYREKQLTRYKDLAKQQAIEPRVVDEQ 195

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E     +         E +N  +       E        + +   DLEQ +       ++
Sbjct: 196 EDFFLSAQ--------EAENEAKESVNAATERAATARAKITQAKADLEQAKAEVGVAQAE 247

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-----PLMKIVPHSKLTYIRAKV 334
           L   E       I SP  G +   +SF   ++ + +      PL+  V  + L  +  +V
Sbjct: 248 LGRAEVLLNYTAIRSPYTGVVTR-RSFQVGDFIRSADQGGAVPLLS-VERTDLMTVVVQV 305

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             + +  V  G  A +                   +      +D   +T          T
Sbjct: 306 PDRDVPLVNTGDPAVLVIDALGGQVFDT-----RGVSRCAESEDTATRTMR--------T 352

Query: 395 DLAFSDNNIELRNGF 409
           ++   + +  LR G 
Sbjct: 353 EIDVPNPDGRLRRGM 367


>gi|221067260|ref|ZP_03543365.1| secretion protein HlyD family protein [Comamonas testosteroni KF-1]
 gi|220712283|gb|EED67651.1| secretion protein HlyD family protein [Comamonas testosteroni KF-1]
          Length = 443

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/375 (10%), Positives = 96/375 (25%), Gaps = 79/375 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I     G +     ++   +  G  L+  +  +         V +      + 
Sbjct: 63  VAGNVVQITPQVGGTVISIGADDTDYVRAGQLLVQLDPADY-------LVQLAQAESQLA 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                   L      L      RE  LL                                
Sbjct: 116 QTARQTRTLYANNAPLAAQVAQREADLL-------------------------------- 143

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                           L+A  +    D+T  + L    AV + + +  + +   ++  + 
Sbjct: 144 ---------------RLKADAAKANDDVTRRRPLTATGAVGKEEFDHAKALATAASNSVA 188

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 +     +     +     A           ++        +K+       ++  
Sbjct: 189 AAEAAVRAAKAQLTAAEAQTKGTTA-----------EDFPAVMVAAAKVREAYLALQRTR 237

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           +++P+ G +                PL+ +V      ++ A     Q+  ++ G    + 
Sbjct: 238 LIAPVDGFVAKRGV-QLGQRVAAGSPLLTVV-DLHKLWVDANFKESQLADLRMGQKVELT 295

Query: 352 FPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
              Y D     ++  +  +          + +Q       +    V ++I+    +    
Sbjct: 296 ADVYGDKTT--YEGKVVGLGAGTGAAFALLPAQNATGNWIKVVQRVPVRISLEPEALKQH 353

Query: 404 ELRNG--FPAEVLFT 416
            LR G     +V   
Sbjct: 354 PLRVGLSMDVKVDIR 368


>gi|313677208|ref|YP_004055204.1| efflux transporter, rnd family, mfp subunit [Marivirga tractuosa
           DSM 4126]
 gi|312943906|gb|ADR23096.1| efflux transporter, RND family, MFP subunit [Marivirga tractuosa
           DSM 4126]
          Length = 419

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 86/252 (34%), Gaps = 16/252 (6%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN-DLNQQERIVYKSTLELR 231
            +     ++EN+     +  +  + D  +         ++    + +++ ++ +S  E  
Sbjct: 99  ELADRLRNVENEYQQSLSQYTQTKLDTALTLRQSRDELINLEFAVEEKKLVLEQSQFEPP 158

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             I + +  L      + +A   +     +    +++     +++  +   L + R++  
Sbjct: 159 ATIKQAEIDLSKAERAFKQAKENYLLKKDKAVAQMQEAAAELSEDRDERDFLLELRQKFR 218

Query: 292 ILSPIAGTIVYNQSF-----SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           I++P  G ++Y + +     S         P +  +P          V    I+ + KG 
Sbjct: 219 IMAPEDGMVIYVREYDGSKKSEGASIGAWDPTVATLPDLSTMISTTFVNEVDIRKIAKGQ 278

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              +    + D   KK    +  +  +  Q+ N+      +EV ++I +      +  LR
Sbjct: 279 HVNIGLDAFPD---KKLTGEVIYVANVGEQRPNSDAK--VFEVKVEINE-----TDTTLR 328

Query: 407 NGFPAEVLFTAK 418
                       
Sbjct: 329 PAMSTANEIITD 340



 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 17/140 (12%), Positives = 49/140 (35%), Gaps = 4/140 (2%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK--SALDFLNNKYDVLE 128
            V+ G+ + +G  + + +  E  D +   +   +         K  +AL    ++ +++ 
Sbjct: 79  LVDEGTVVKKGDFVASLDASELADRLRNVENEYQQSLSQYTQTKLDTALTLRQSRDELIN 138

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             F   E++L+    ++              + ++ +       +  L +     +    
Sbjct: 139 LEFAVEEKKLVLEQSQFEP--PATIKQAEIDLSKAERAFKQAKENYLLKKDKAVAQMQEA 196

Query: 189 RALLSSHQKDLTMMKNLFEK 208
            A LS  + +   +  L +K
Sbjct: 197 AAELSEDRDERDFLLELRQK 216


>gi|94310965|ref|YP_584175.1| secretion protein HlyD [Cupriavidus metallidurans CH34]
 gi|93354817|gb|ABF08906.1| multidrug efflux system (MFS family) [Cupriavidus metallidurans
           CH34]
          Length = 413

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 97/300 (32%), Gaps = 32/300 (10%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           +  + + QL+                 +      L   +  +R++Y+N   L    +L  
Sbjct: 74  SIAADDTQLVTAGQPLIQLDRADTQVAMEQAEAQLAQAVREVRTLYVNNASLAANVALRD 133

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A ++  + DL   + +    AVS  +++  +  +  +   L  +  +  +     ++   
Sbjct: 134 ADVAKARDDLRRRQAIAGSGAVSSEEISHAQTALKAAESALLASKEQLASNQVLTDQTTV 193

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +                 QR  A+  S       +  + T+ +P+ G +   +S    
Sbjct: 194 EKHPNV--------------QRAAANLRS----AYLSFARSTLPAPVTGYVAK-RSVQVG 234

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  PLM +VP     ++ A     QI H++ G    +    Y      K++  +E 
Sbjct: 235 QRVAAGTPLMAVVPLD-QVWVDANFKEVQITHMRIGQPVELEADVYGSKV--KYQGHVEG 291

Query: 370 ID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                       P  +   N ++  +   V + +      ++ + +       V    + 
Sbjct: 292 FSAGTGAAFSLLPAQNATGNWIKVVQRLPVRIALDAQQLKEHPLRVGLSMNVTVDVRKEE 351



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 62/185 (33%), Gaps = 10/185 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV++     G +     ++   +  G PL+  +  +T   ++  +  +      + 
Sbjct: 57  VAGNVVQVTPLVGGTVVSIAADDTQLVTAGQPLIQLDRADTQVAMEQAEAQLAQAVREVR 116

Query: 112 TE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           T        A +      DV +   + R  Q +   G   S         + +   +L  
Sbjct: 117 TLYVNNASLAANVALRDADVAKARDDLRRRQAIAGSGAVSSEEISHAQTALKAAESALLA 176

Query: 167 KLTRM--RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
              ++    +  ++  +E   ++ RA  +     L+  ++         V++  +   +R
Sbjct: 177 SKEQLASNQVLTDQTTVEKHPNVQRAAANLRSAYLSFARSTLPAPVTGYVAKRSVQVGQR 236

Query: 222 IVYKS 226
           +   +
Sbjct: 237 VAAGT 241


>gi|167590583|ref|ZP_02382971.1| Secretion protein, HlyD family [Burkholderia ubonensis Bu]
          Length = 186

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 61/180 (33%), Gaps = 12/180 (6%)

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               +          + +  +EQ +   A   +KL + +   E   I +P  GTI   ++
Sbjct: 5   RAQGDQQTVLLRRRAQSTAAIEQARARLAASRAKLALAQLDLEHTVIRAPRDGTI-GQRA 63

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
             +  Y +   PL+ +VP   +  I A     Q+  ++ G    +    Y+         
Sbjct: 64  VRAGQYVEVGMPLLAVVPLRDVYVI-ANFKETQLGAMRDGQPVEIDVDTYSGRT---LHG 119

Query: 366 IIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTAK 418
            +  + P    +      +  T  + +++ ++     L    + + LR G         +
Sbjct: 120 RVLGLSPGSGAEFALLPPDNATGNFTKIVQRVPVKIRLDTPPSGLVLRPGMSVIARVDTR 179


>gi|304398294|ref|ZP_07380168.1| secretion protein HlyD family protein [Pantoea sp. aB]
 gi|304354160|gb|EFM18533.1| secretion protein HlyD family protein [Pantoea sp. aB]
          Length = 342

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/356 (11%), Positives = 100/356 (28%), Gaps = 82/356 (23%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I   +V++  Q+  G  L T +D              ++ R  +++ ++ L      
Sbjct: 54  SGYISHVEVQDNQQVKAGQLLATLDD--------------RDYRVALESAEADL------ 93

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                      +V    + S    L+ + + +     +    + 
Sbjct: 94  ---------------------------QVSQAKLLSSQAQLEQQQSMIDQQKASVAASQA 126

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
            +         + +       L++   V+ +D  +       +   + ++     + ++ 
Sbjct: 127 SAQYAGQSADRYNR-------LYKSGTVAADDQQKASSNQRSALAAVHQSQAALASAIKQ 179

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +  L                  +   +   A   + +           I +P+ G +   
Sbjct: 180 VGVL---------------QAAVRSAEADVAAAKASVDQARLNLSYTRITAPVDGMVGQR 224

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +   Y      L+ +VP  +       +  +    V+ G    +R           F
Sbjct: 225 AVRT-GAYVSAGTRLLAVVPLQQTYITANYLETQLSD-VRPGQRVRIRVDALPGET---F 279

Query: 364 KAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPA 411
              ++ I P      S    +  T  Y +V+ ++      D +      LR G  A
Sbjct: 280 TGHVDSIAPATGATFSAIAPDNATGNYTKVVQRLPVKIVLDGDQPHLAQLRVGMSA 335


>gi|299532924|ref|ZP_07046311.1| Co/Zn/Cd efflux membrane fusion protein CzcB [Comamonas
           testosteroni S44]
 gi|298719148|gb|EFI60118.1| Co/Zn/Cd efflux membrane fusion protein CzcB [Comamonas
           testosteroni S44]
          Length = 442

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/250 (12%), Positives = 75/250 (30%), Gaps = 7/250 (2%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +  +E LL    +              ++  S+      +R        +  + + +   
Sbjct: 95  DDEDEGLLKLDAERARAAGVALAEAGPALIASMLQLPGEIRFNEDRTAHVVPRVAGVAES 154

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           ++++   +     L            + E +  +  L L    ++++  L       ++ 
Sbjct: 155 VAANLGQVVKKGQLLATLTSPAVSEQRSELMAAQKRLALARTTYQREKQLWQEKISAEQD 214

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            L+    L+E        Q+  A   +  +       +  + +P  G +V     +    
Sbjct: 215 YLQAQQALREAEIASANAQQKLAAIGA-GSGTAGALNRFELRAPFDGVVVEKHL-AVGEA 272

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            Q S  +  I    +  +   KV    +  V+ G  ATV    +           +  + 
Sbjct: 273 VQDSTAVFTIS-DLRSVWAEMKVAASDLPFVRVGEKATVHATAFESKAT----GTVAYVG 327

Query: 372 PIISQQDNNL 381
            +I Q+    
Sbjct: 328 ALIGQETRTA 337


>gi|188997050|ref|YP_001931301.1| efflux transporter, RND family, MFP subunit [Sulfurihydrogenibium
           sp. YO3AOP1]
 gi|188932117|gb|ACD66747.1| efflux transporter, RND family, MFP subunit [Sulfurihydrogenibium
           sp. YO3AOP1]
          Length = 391

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 83/252 (32%), Gaps = 38/252 (15%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  +++ +  L     + D L  +  S     +   G        VF    S +  ++  
Sbjct: 50  QGELESYQKFLGEFRPENDALVSSKFSATVLYVANEGTKVKKGDLVFKLDSSDIESNISA 109

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                ++I       + +         + +K+    K L+EK  +S+  L   E +    
Sbjct: 110 LTYSQKAILDQIDSAKAQIEASNTQYINAKKEYERYKGLYEKELISKEQLENMENLY--- 166

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
               ++ +  ++N L  + +L D+A                           ++  L+  
Sbjct: 167 ----KQALANKENALSKVKQLEDQAK----------------------SVAGQIESLKSN 200

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY-------IRAKVTPKQI 339
                  +P  G +V ++  +  + A   +P+++IV   K          +  KV    +
Sbjct: 201 LNYTEYRAPFDG-VVASKFVNVGDVALAGKPVVEIVGSGKYLVYVNVPTELALKVKKGDV 259

Query: 340 QHV-KKGYTATV 350
           + V   G +  V
Sbjct: 260 EKVSYNGQSVDV 271



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 49/123 (39%), Gaps = 2/123 (1%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G+++ +G  +   +  +    I     S K +   ID+ K+ ++  N +Y   +K +E 
Sbjct: 85  EGTKVKKGDLVFKLDSSDIESNISALTYSQKAILDQIDSAKAQIEASNTQYINAKKEYE- 143

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R + L +           + N    ++       L++++ +      +  +   L++ L+
Sbjct: 144 RYKGLYEKELISKEQLENMENLYKQALANKENA-LSKVKQLEDQAKSVAGQIESLKSNLN 202

Query: 194 SHQ 196
             +
Sbjct: 203 YTE 205


>gi|94263501|ref|ZP_01287313.1| Secretion protein HlyD [delta proteobacterium MLMS-1]
 gi|93456139|gb|EAT06282.1| Secretion protein HlyD [delta proteobacterium MLMS-1]
          Length = 402

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 72/217 (33%), Gaps = 23/217 (10%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L ++      +  + E     + LEL      ++  L   + +  EA  E     K ++
Sbjct: 107 TLADEELRRDLNRLEHETEATAAELELARRQLARREQLYAQDAITREALEESQARTKTLA 166

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L  N++     + +L           I +P AG +    +    + A   QPL+++V 
Sbjct: 167 ASLAANRQARQAAVERL-------GYTRIRAPFAGVVGRLHAL-PGDLASPGQPLLELV- 217

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                     V    +  +  G    ++ P       +++ A ++++ P +       + 
Sbjct: 218 AVDQLKAEFVVPQNDLAGIGPGAPLRIKVPAAD----RQWDAALDRLHPDLKPPGRGARA 273

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +           L  ++    LR G  A V     + 
Sbjct: 274 ET----------LLPAEAAGFLRPGMTASVEVLVHHR 300



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 57/166 (34%), Gaps = 4/166 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +  +N   + S  +G I+      G ++  G  L T  D E    ++  +   +     +
Sbjct: 72  IAAENQAVLSSRITGTIRTMPFRAGDRVAAGDILFTLADEELRRDLNRLEHETEATAAEL 131

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +  +  L     + + L        E L +   +  +  + +     +      ++  TR
Sbjct: 132 ELARRQL----ARREQLYAQDAITREALEESQARTKTLAASLAANRQARQAAVERLGYTR 187

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +R+ +   +   +      A       +L  +  L  +  V QNDL
Sbjct: 188 IRAPFAGVVGRLHALPGDLASPGQPLLELVAVDQLKAEFVVPQNDL 233


>gi|311029361|ref|ZP_07707451.1| RND family efflux transporter MFP subunit [Bacillus sp. m3-13]
          Length = 406

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 99/269 (36%), Gaps = 33/269 (12%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           S  S+     ++    ++      +  +   +   EN++SL  + +   Q++L   ++L 
Sbjct: 92  SLDSEAATEQVTQAQSAVTELENALSKMKEMQEAAENQASL--SDIPKLQEELN--QSLE 147

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +  A     L         ++L+L ++  +       +     +          E+   L
Sbjct: 148 KSQA-----LLDGVDTGAVTSLDLVQSTVDVMVKQAQLATAASQVQQMPTFNTMEVEAQL 202

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            Q ++        L   ++  +  +I SPI G +      +    A  + P+  I+    
Sbjct: 203 NQARQG-------LKQAQQMADATSITSPIDGIVSELNVVNDG-IASPNVPIGTII-QLD 253

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
                 +V   Q+  +K G  AT+ F   AD     F++ IE + P ++QQ N       
Sbjct: 254 NIAATFQVNSYQVSKLKAGQDATISFEGLADS----FESKIETVSPTVNQQTNM------ 303

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + V + ++     +  +E++ G  A    
Sbjct: 304 FSVTIPVS-----NTELEIKGGMRATAFV 327



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 55/144 (38%), Gaps = 15/144 (10%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++   V+ G  + +G  +++ +    T+ +   + ++  L   +   K   +   N+  +
Sbjct: 73  VESVHVKIGDIVKKGDLIVSLDSEAATEQVTQAQSAVTELENALSKMKEMQEAAENQASL 132

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV------------YRSLKMKLTRMRSI 174
            +      +E+L   L K  +    V    ++S+               L    ++++ +
Sbjct: 133 SD--IPKLQEELNQSLEKSQALLDGVDTGAVTSLDLVQSTVDVMVKQAQLATAASQVQQM 190

Query: 175 -YLNRLDLENKSSLLRALLSSHQK 197
              N +++E + +  R  L   Q+
Sbjct: 191 PTFNTMEVEAQLNQARQGLKQAQQ 214


>gi|262163958|ref|ZP_06031697.1| membrane-fusion protein [Vibrio mimicus VM223]
 gi|262027486|gb|EEY46152.1| membrane-fusion protein [Vibrio mimicus VM223]
          Length = 365

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 84/262 (32%), Gaps = 19/262 (7%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               ++    + +     ++   ++ D   +     A     +    +   + +   V  
Sbjct: 42  QETQTAAEIQVPLAKVGYQTFTASQTDKVIELYGRTAPDRQAKIGAEIAGRIIDIKIVKG 101

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             +N+ + I      +L   +   K  L  + +    A     N   +            
Sbjct: 102 QAVNKDQIIALIDKGDLDAQLERAKAQL-KVRQQEFNAASSLKNKGLQGEVAFTNAAAAL 160

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            D  S L+ +++      + +P  G +         ++     P+  I+       I A 
Sbjct: 161 TDAQSSLSTVQRLLANTQVRAPFDGLVETLPI-EKGDFVGIGDPVASII-DLHKLVIEAD 218

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V+ + IQHV+ G +A +RF     I     +  +  I  + S   N       + + +++
Sbjct: 219 VSERHIQHVQLGQSARIRF-----IDGSDTQGKVRYISRLSSPATNT------FAIEVEV 267

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
            +   +     +  G  AEV  
Sbjct: 268 DNPQQA-----IPAGVSAEVEL 284



 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 61/200 (30%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I   ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIELYGRTAPDRQAK-IGAEIAGRIIDIKIVKGQAVNKDQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 127 AQLKVRQ----QEFNAASSLKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLANTQVRAP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  L   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 183 FDGLVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLGQSA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGSDTQGKVRYISRL 253


>gi|189348571|ref|YP_001941767.1| multidrug resistance protein A [Burkholderia multivorans ATCC
           17616]
 gi|189338709|dbj|BAG47777.1| multidrug resistance protein A [Burkholderia multivorans ATCC
           17616]
          Length = 408

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/413 (10%), Positives = 112/413 (27%), Gaps = 80/413 (19%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  +  ++++ ++G + W          +       + N + +    SG +
Sbjct: 62  ERKRPGRKPLIILGAIALLLVVGGLVW-WFATRNQESTDDAY--TDGNAIAVAPHVSGYV 118

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V++   + +G  L+  +  +    +D     +      +D  +  LD    +Y   
Sbjct: 119 TRLAVDDNVYVHRGDVLVEIDPRDYRAQVDAAHAQLGLAEAQLDAARVQLDIARVQYPAQ 178

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +   ++ E       +  +  ++     + +  +         R+     + +    + 
Sbjct: 179 YRQARAQIESAEAAYRQALAAQARQRAVDVRATSQQAIDAADAQRASADANVAMAQAQAR 238

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             +L+                                       + I + + ++    + 
Sbjct: 239 TASLVP--------------------------------------QQIRQAETVVEERRQQ 260

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +A  +                             E      T+ +P  G +       
Sbjct: 261 VLQARAQLEQ-------------------------AELNLAYCTMRAPSDGWVTRRNV-Q 294

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             ++ Q    +  IV  +   +I A     Q++ ++ G    V    Y D+        +
Sbjct: 295 LGSFLQPGTSIFSIV--TPRVWITANFKESQLKRMRVGDRVDVSVDAYPDL---DLHGHV 349

Query: 368 EKI--------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           + I            ++       +    V +KI        N  L  G   E
Sbjct: 350 DSIQLGSGSRFSAFPAENATGNFVKIVQRVPVKIVLDGPLPRNPPLGLGLSVE 402


>gi|313667721|ref|YP_004048005.1| multidrug resistance translocase [Neisseria lactamica ST-640]
 gi|313005183|emb|CBN86616.1| multidrug resistance translocase [Neisseria lactamica 020-06]
          Length = 390

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 109 NELVQAVRQNRRQNAATSQAAAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 168

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 169 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPEVQTAIGRLK 211

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 212 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-MWVDANFKETQLRH 269

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 270 MKIGQPAEL 278



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 60  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 119

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++A      + D+     + R    L   G   +     ++       +  ++
Sbjct: 120 RQNAATSQAAAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 179

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  +  +  A+       L + + 
Sbjct: 180 ALAEESSARAALGGQVSLREQPEVQTAIGRLKDAWLNLQRT 220


>gi|167034070|ref|YP_001669301.1| hypothetical protein PputGB1_3073 [Pseudomonas putida GB-1]
 gi|166860558|gb|ABY98965.1| conserved hypothetical protein [Pseudomonas putida GB-1]
          Length = 448

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 8/157 (5%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           + +  +       +R  LL  +    L+    L+P+  +  +  +I        + SP  
Sbjct: 168 LTRRQRLGRWRPSRRQVLLVALLFGALL----LVPVRQTALAPAQI-VSRQAQIVTSPID 222

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNK 123
           G+I + QV     +  GTPL   ++       D+    +      +    + A D   +K
Sbjct: 223 GVINQVQVRPNQPVEAGTPLFALDETTLRSRADVLGKEVAVADAELVAASQRAFDNPQSK 282

Query: 124 YD--VLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  +L+   + R  +L     +   T       G++
Sbjct: 283 GELTLLQGRAQQRRAELAAVQAQLKRTQVLAPRAGVA 319



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 54/168 (32%), Gaps = 10/168 (5%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +  +       + +    A  + A    +   +L   Q       ++L  ++   ++  
Sbjct: 251 RSRADVLGKEVAVADAELVAASQRAFDNPQSKGELTLLQGRAQQRRAELAAVQAQLKRTQ 310

Query: 292 ILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           +L+P AG  +  + +          + +M++  P      I  ++       ++ G   T
Sbjct: 311 VLAPRAGVAVFSDPNDWLGKPVSTGERIMQVADPAQPAMQI--QLAVADAIALEPGAEVT 368

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           +    Y        K  + +        D+ +     Y ++  I + A
Sbjct: 369 LFLTAYPLS---PLKGKVLETSYQARPADDGVVA---YRLLASIDEHA 410


>gi|126663117|ref|ZP_01734115.1| membrane fusion efflux protein, putative [Flavobacteria bacterium
           BAL38]
 gi|126624775|gb|EAZ95465.1| membrane fusion efflux protein, putative [Flavobacteria bacterium
           BAL38]
          Length = 437

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 89/289 (30%), Gaps = 21/289 (7%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL--TMMKNL 205
             SKV    I     +       +     + +  E  +  ++      + DL   +  +L
Sbjct: 39  ELSKVAQTTIIETVSATGKIQPEIEVKISSEVSGEVIALTVKEGQQVKKGDLLVRINPDL 98

Query: 206 FEKNA-VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--EFANYLKEI 262
           +E     S   ++  +  + ++  +++E         +   +     +      +  +  
Sbjct: 99  YESGVNRSVASMSTTKAGLSQADAQVKEAKANYDRNQKLFEKGIISKSEWDRIVSAYEVA 158

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPL 318
             + +          + +T  +    + TI +P  GTI                     +
Sbjct: 159 VANKQSAYYQVQSASATVTEAKDNLGRTTIYAPADGTISLLNIELGERVLGTQQMTGTEI 218

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           ++I   +    +   V    I  V  G +A +    Y    +++FK I+  I    S   
Sbjct: 219 LRIANLNN-MEVEVDVNENDIVKVNIGDSAKIEVDAY---LKREFKGIVTSISNSASSAL 274

Query: 379 NNLQTQEYYEVILKITDLAFSD-------NNIELRNGFPAEVLFTAKNT 420
              Q   + +V ++I   ++ D       N    R G  A V    K  
Sbjct: 275 TADQVTNF-KVKVRILKESYQDLLEGKPENYSPFRPGMTATVDIITKRK 322



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 65/196 (33%), Gaps = 2/196 (1%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               I  +VS++G+I  E  V  I S  SG +    V+ G Q+ +G  L+          
Sbjct: 44  AQTTIIETVSATGKIQPEIEVK-ISSEVSGEVIALTVKEGQQVKKGDLLVRINPDLYESG 102

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++    S+   +  +    + +      YD  +K FE       ++     +    V N 
Sbjct: 103 VNRSVASMSTTKAGLSQADAQVKEAKANYDRNQKLFEKGIISKSEWDRIVSAYEVAVANK 162

Query: 156 GISSVY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +    +S    +T  +               +  L     + +   + +     +   
Sbjct: 163 QSAYYQVQSASATVTEAKDNLGRTTIYAPADGTISLLNIELGERVLGTQQMTGTEILRIA 222

Query: 215 DLNQQERIVYKSTLEL 230
           +LN  E  V  +  ++
Sbjct: 223 NLNNMEVEVDVNENDI 238


>gi|171910833|ref|ZP_02926303.1| probable membrane-fusion protein [Verrucomicrobium spinosum DSM
           4136]
          Length = 609

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 79/219 (36%), Gaps = 20/219 (9%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L   +      + Q + +      E+   + E +  L  + +  D+          E   
Sbjct: 392 LAAAHVKPGQQIQQGQVLAELDGKEIGWKLAEVQARLNALTKRRDQM------LAAENMS 445

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVP 323
           + +      A   ++  +L+   E   I SP+ G ++  + S S     Q+ Q L  + P
Sbjct: 446 EAQLASLEMASLDAERRLLQYQSENLQIRSPLDGVVISGDLSQSEGVPVQRGQRLFDVAP 505

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 ++  V   +I+HV  G + ++R    A+ R+      +E +  I   ++     
Sbjct: 506 IES-FTVQLAVPASEIRHVAPGMSVSIRLESEAEFRQTGVVNTLEPVSRIHEGKN----- 559

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
                  + +      +++  LR G   +   T+ N +L
Sbjct: 560 -------VFLGTTTLDNSSGRLRPGMQGKARITSGNKSL 591



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 44/137 (32%), Gaps = 1/137 (0%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E           GI+    V+ G QI QG  L   +  E    +   +  +  L    D
Sbjct: 378 PELRRQVAVPFD-GILAAAHVKPGQQIQQGQVLAELDGKEIGWKLAEVQARLNALTKRRD 436

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              +A +    +   LE A    E +LL +  +     S +    IS      +    + 
Sbjct: 437 QMLAAENMSEAQLASLEMASLDAERRLLQYQSENLQIRSPLDGVVISGDLSQSEGVPVQR 496

Query: 172 RSIYLNRLDLENKSSLL 188
                +   +E+ +  L
Sbjct: 497 GQRLFDVAPIESFTVQL 513


>gi|163800300|ref|ZP_02194201.1| multidrug resistance efflux pump [Vibrio sp. AND4]
 gi|159175743|gb|EDP60537.1| multidrug resistance efflux pump [Vibrio sp. AND4]
          Length = 407

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 55/413 (13%), Positives = 128/413 (30%), Gaps = 97/413 (23%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS--- 64
           N      A L     L  I +  +       P++    S G ++   ++     P S   
Sbjct: 23  NNATKLFAYLGGFGWLMFIWVGLI----NFTPMD---LSGGSVVQSPHIQM--RPDSPNV 73

Query: 65  -GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   ++   Q+ +G  +   +  +    ++   VS  + R  +   +  ++     
Sbjct: 74  KGKVEHIYIKPNQQVEKGQLIYELDPTQYNIALNKANVSEDSARVALLAAQGDIEIEKVN 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +  L                                           ++ +  ++  LE 
Sbjct: 134 HQAL-------------------------------------------IQDLETSKSQLET 150

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV---YKSTLELRENIHEQKNM 240
           +    +       + L   +    KN ++++D+++Q   V    +  L L   I +++  
Sbjct: 151 EKVDYKLQKKMLDRYLEQNR--VVKNTITESDIDKQSSAVDMASQKVLTLESQIKKKRVD 208

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           +        +A L       E    L Q Q   A         +   +   + +P  G +
Sbjct: 209 ISRAKLAIHKAELTVETKQAE----LRQAQEQVA-------KAQWDLDSTKVYAPADGFV 257

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPH----SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
                       ++ Q +  ++P     +   Y+  +V  + I++VK G  A      Y 
Sbjct: 258 TN-------FILREGQRV-SMMPRINMYTNEKYVLMRVNHQAIRNVKPGQPAEFSSSVYP 309

Query: 357 DIRE-KKFKAIIEKI-----------DPIISQQDNNLQTQEYYEVILKITDLA 397
                   + I+E             D + +    N++ + ++ V LKI +  
Sbjct: 310 GKIFAATVEGIVEATGESQSNLLGLDDSVRATTGKNVKNKHHF-VRLKIDEPE 361


>gi|332139535|ref|YP_004425273.1| probable membrane fusion protein (HlyD family of secretion
           proteins) linked to ABC efflux pumps [Alteromonas
           macleodii str. 'Deep ecotype']
 gi|327549557|gb|AEA96275.1| probable membrane fusion protein (HlyD family of secretion
           proteins) linked to ABC efflux pumps [Alteromonas
           macleodii str. 'Deep ecotype']
          Length = 350

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/412 (11%), Positives = 122/412 (29%), Gaps = 77/412 (18%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +  P  L  M ++ +I +   +  S    ++  VS +G I   +  + I +  +G +++ 
Sbjct: 2   KKTPFILSIMFVVFLIVVFSTVF-SGPENVD-VVSGNGRIEATE--IGISAKVAGRVEEI 57

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G ++  G  +   +       +   K   +  +  ++    A+    ++   LE A
Sbjct: 58  YVSEGDRVTAGDVVAKLDTTTINSQLQQAKAQHQQAKSAVEAANMAVAQRQSEKSALEAA 117

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               + +L                                    +  R +   K+  +  
Sbjct: 118 LLQTKAELKAAEA-------------------------------HAARTNELAKTGAVSK 146

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L+  + +LT +++       ++  L   +  +  S  +              I ++  E
Sbjct: 147 QLA--EDNLTNVESAKAAVNAAKARLTAADATIEASRAQYYSAQAAVSAANATIAQIQSE 204

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            N                                       + +P  G I Y +      
Sbjct: 205 IN------------------------------------DMVLKAPRNGRIQY-RVVEPGE 227

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                  ++ +V      Y+   +   Q+  +  G  A +      DI      + +  +
Sbjct: 228 VVSAGGRVLSLV-DLTNVYMTFFLPASQVGKLTMGGEALIVLDAAPDIAIPATISYVADV 286

Query: 371 DPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                +  +  + + +  + V  +I +     +  +++ G P EV     +T
Sbjct: 287 AQFTPKSVETQSEREKLMFRVKAQIPENLLKQHIEKVKTGLPGEVWVKLNDT 338


>gi|170078092|ref|YP_001734730.1| RND family efflux transporter MFP subunit [Synechococcus sp. PCC
           7002]
 gi|169885761|gb|ACA99474.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7002]
          Length = 460

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/343 (12%), Positives = 103/343 (30%), Gaps = 58/343 (16%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  +E G  + Q   +   + +E  + +      I  L+     EK+ +  L  K 
Sbjct: 77  GYVPRLDLEVGDPVSQDQVIAQIDPLEFDNDVSAILAQINALQA----EKTGVATLRPKT 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +                                     SL     +++++       +  
Sbjct: 133 E-------------------------------------SLTQAEAKIKAVEAEIAGDQAI 155

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           ++ LR      Q++    + L+   A+S+  L             L            ++
Sbjct: 156 ATELRIRFIQAQQEQQRGEFLYRNGAISKQALETLALNTKAIAQNLEVAQQRLNQAQANL 215

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E    A  E     ++    LE          ++L       ++  I +PI+G ++   
Sbjct: 216 QEAIA-ARDELRATQQDPDYLLEVYDAQIRSLEAELANRTDQVQRTAIKAPISGQVLRLY 274

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV-------------- 350
             +   Y +  QPL+++    +   +   V   +   ++ G    +              
Sbjct: 275 QKNY-QYLEAGQPLLELG-DLQNLAVMVDVLSSEATQIQPGNPVIINQWGGDRPLTGQVK 332

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           R    A  +        ++++ ++S  D      + Y V  +I
Sbjct: 333 RLEPAAFTKVSALGVEEQRVNVVVSLDDIPANLGDQYRVETQI 375


>gi|154252975|ref|YP_001413799.1| RND family efflux transporter MFP subunit [Parvibaculum
           lavamentivorans DS-1]
 gi|154156925|gb|ABS64142.1| efflux transporter, RND family, MFP subunit [Parvibaculum
           lavamentivorans DS-1]
          Length = 343

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 72/196 (36%), Gaps = 20/196 (10%)

Query: 226 STLELRENIHEQKNMLRHINELYDEAN-LEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              E    +HE +  L+  N   D A  L  +  + E +  L+Q Q   +   + L   +
Sbjct: 89  ELGEDISRVHELEARLKLANADLDRARTLRRSGNVSEAA--LDQAQSAQSATAAALRGAK 146

Query: 285 KTREQKTILSPIAGTIVYNQS-FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
              +   I +P+AGT++ ++S     + AQ    ++ +V  +    I A+V  + I  V 
Sbjct: 147 ARLDDHFITAPMAGTVLRSESQIRVGDMAQPG-HVLFMVGDTAELQIDAEVDEEDITKVA 205

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
               A +R   +        K  +++I P              Y V + +        + 
Sbjct: 206 PEQEALIRADAFPGR---ALKGTVKRITPYGDPVGRT------YRVYISL------PADT 250

Query: 404 ELRNGFPAEVLFTAKN 419
            L +G   E+    + 
Sbjct: 251 PLISGMTTEINIVVRR 266



 Score = 40.0 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 42/118 (35%), Gaps = 5/118 (4%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +V ++G +   +    + +  SG I       G  + +G  L   E  E    +   + 
Sbjct: 44  EAVYATGTVEPVNYAR-VGAKISGRITNVLKREGEPVEKGNILAIIELGEDISRVHELEA 102

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            +K     +D  ++    L    +V E A +  +              +++ ++ I++
Sbjct: 103 RLKLANADLDRART----LRRSGNVSEAALDQAQSAQSATAAALRGAKARLDDHFITA 156


>gi|114776420|ref|ZP_01451465.1| putative multidrag resistance protein [Mariprofundus ferrooxydans
           PV-1]
 gi|114553250|gb|EAU55648.1| putative multidrag resistance protein [Mariprofundus ferrooxydans
           PV-1]
          Length = 358

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 80/294 (27%), Gaps = 36/294 (12%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E Q +             F   +      L    T +  +  +  + E + +L R  L  
Sbjct: 79  ENQPVKAGQLLFRIDPAPFQVALDKAEAKLAQVRTDLAVLKASYSEKEAEIALARTNLVF 138

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            + D      L     +S + L+  ++    +     + I   +  L  I      +   
Sbjct: 139 ARHDQRRKSTLAANKFISASTLDNAQQSTDTAE----QRISVLEKSLARIAATLGGSIDV 194

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                 +    + +                    +  I +   G +          Y   
Sbjct: 195 PIEDHPDYRIAMAEV-----------DQARLMLARTEIRAAQPGIVSKLP--KIGQYVSA 241

Query: 315 S-QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               LM +V  S   ++ A  T K + +V  G   T+    Y D     +  +++ + P 
Sbjct: 242 GSAALMLVV--SNNFWVEANFTEKDLTYVHPGQPVTIHIDTYPDT---AWTGVVKSLSPA 296

Query: 374 ISQQDNNLQTQ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
              + + +  Q          +   V + I   A      +L  G    V    
Sbjct: 297 TGAEFSVIPAQNATGNWIKIAQRLPVRISIKTTAGKP---QLLAGLSTTVEIDT 347



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 69/234 (29%), Gaps = 19/234 (8%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL------NEDNVVEIKSPFSG 65
           N    L+R+TL+ +I  I  I       + I     G  +       +   V +    SG
Sbjct: 17  NPKLRLRRLTLMIVIPCIAAIV------VGIVYLKGGRYIETDNAYVKAEKVAVSPQVSG 70

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I    V     +  G  L   +       +D  +  +  +R  +   K++      +  
Sbjct: 71  QITDLLVHENQPVKAGQLLFRIDPAPFQVALDKAEAKLAQVRTDLAVLKASYSEKEAEIA 130

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +                 +  ST +       S++  + +   T  + I +    L   +
Sbjct: 131 LARTNLV-----FARHDQRRKSTLAANKFISASTLDNAQQSTDTAEQRISVLEKSLARIA 185

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           + L   +    +D    +    +  V Q  L      +  +   +   + +   
Sbjct: 186 ATLGGSIDVPIEDHPDYRIAMAE--VDQARLMLARTEIRAAQPGIVSKLPKIGQ 237


>gi|260913182|ref|ZP_05919664.1| membrane fusion protein [Pasteurella dagmatis ATCC 43325]
 gi|260632769|gb|EEX50938.1| membrane fusion protein [Pasteurella dagmatis ATCC 43325]
          Length = 321

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 93/306 (30%), Gaps = 46/306 (15%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L      +   +  R EQ+    G+Y +  + +      S+   +     ++     + 
Sbjct: 37  RLEFARLDVASLYAGRVEQIFVQEGQYVAQDTLLATLSADSIQAQVDTAKAKVEQAQQSV 96

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             ++ + +  +  L+  Q D+   + LF+   +S ++LN+               I  + 
Sbjct: 97  KRIKAQFNAQQQQLNISQLDVDNAQQLFKDKLISSSELNK--------------RIALRD 142

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +N L      E  + +K+ +  L Q Q T  D                I +P  G
Sbjct: 143 AAFAGLNALQSSIE-EAESVVKQANAQLMQAQSTLNDL--------------HIKAPKTG 187

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKL---TYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            I   +     +       +  I+  +      Y  A V    +  +     A + F   
Sbjct: 188 RI-EYRLVELGSVIPAGHKIASIIDLTDASMNLYFPAPV----VNQIPLNSEARIVFDGL 242

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRNGFP 410
             +    F A I  I          ++TQ       ++V L I     +     L+ G  
Sbjct: 243 DAV----FPAQITYIAAEAQFTPKFVETQSEREKLMFKVKLHIPQDIATKYANYLKAGMT 298

Query: 411 AEVLFT 416
                 
Sbjct: 299 GNGFVR 304



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 68/186 (36%), Gaps = 14/186 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEI---SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           + L+ ++ I   I W   L        V S+G +      +++ S ++G +++  V+ G 
Sbjct: 5   LFLIPLLAIGVFIYWYQYLQTNQNSHIVHSNGRLEFA--RLDVASLYAGRVEQIFVQEGQ 62

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + Q T L T         +D  K  ++  +  +   K+  +    + ++ +   ++ ++
Sbjct: 63  YVAQDTLLATLSADSIQAQVDTAKAKVEQAQQSVKRIKAQFNAQQQQLNISQLDVDNAQQ 122

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              D L         + +  ++            + ++  +  + E+      A L   Q
Sbjct: 123 LFKDKL---------ISSSELNKRIALRDAAFAGLNALQSSIEEAESVVKQANAQLMQAQ 173

Query: 197 KDLTMM 202
             L  +
Sbjct: 174 STLNDL 179


>gi|256075285|ref|XP_002573950.1| dynamin-associated protein [Schistosoma mansoni]
 gi|238659142|emb|CAZ30183.1| dynamin-associated protein, putative [Schistosoma mansoni]
          Length = 1594

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 74/219 (33%), Gaps = 13/219 (5%)

Query: 84  LLTFEDI--ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           LL        +    D ++ + +  +  +D  K  L       + +    E  E +    
Sbjct: 263 LLHLSSTFPHSLSFEDKRRENFRQGQAELDRRKQELAEKMRLDEEIRLENERLEREKQQK 322

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-------LDLENKSSLLRALLSS 194
           L               + + R L+ +  + R   + +       L+ + +    R    +
Sbjct: 323 LRMEKERQQAAEAEKQAELSRQLEAQREQRRRQAVEQRMKAARDLEKQRQIESERIRTDA 382

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             K+   M+ L E+    +  L +      +  LEL   ++  +  +       +E   +
Sbjct: 383 LLKERNHMQTLLEQAVAHRASLLESASSQQQRLLELDSRLNVAQTEVDSHKTSINEMRSK 442

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              Y ++I    EQ +   A+    LT  ++ +EQ ++ 
Sbjct: 443 RDAYERDIRDMTEQVEAAKAE----LTHWQREKEQLSLR 477



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/238 (11%), Positives = 74/238 (31%), Gaps = 30/238 (12%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +  E+         K    K  +   + EK A      +    ++  ++ E+++      
Sbjct: 308 IRLENERLEREKQQKLRMEKERQQAAEAEKQAELSRQLEAQREQRRRQAVEQRMKAARDL 367

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM--- 201
                 +       ++ +      T +     +R  L   +S  +  L      L +   
Sbjct: 368 EKQRQIESERIRTDALLKERNHMQTLLEQAVAHRASLLESASSQQQRLLELDSRLNVAQT 427

Query: 202 ----------------------MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH---- 235
                                 ++++ E+   ++ +L   +R   + +L +   +     
Sbjct: 428 EVDSHKTSINEMRSKRDAYERDIRDMTEQVEAAKAELTHWQREKEQLSLRMAAGVDMNPV 487

Query: 236 -EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            EQ   L+ + E   +   +  N L E+ +++ Q     A   +K+   +    +  +
Sbjct: 488 MEQYKTLQSMREARIKTIEQLRNKLNELDQNMTQQGHELATRRNKIDDSQDRVTRTML 545


>gi|254421602|ref|ZP_05035320.1| ABC exporter membrane fusion protein, DevB family [Synechococcus
           sp. PCC 7335]
 gi|196189091|gb|EDX84055.1| ABC exporter membrane fusion protein, DevB family [Synechococcus
           sp. PCC 7335]
          Length = 403

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/346 (13%), Positives = 118/346 (34%), Gaps = 59/346 (17%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFS---GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +V++ G +     ++ I  P S     I   +V  G +I  G  +   ++         
Sbjct: 64  STVTALGALEPAGELISITPPTSVQESRIGDLRVSEGDRIEAGQIIAVLDN--------- 114

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                                     D LE A    E+Q+     K     S++     S
Sbjct: 115 -------------------------RDRLEAALRKAEQQVEIARAK----QSQIEAGAKS 145

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
              ++   ++ R+ +  +  +  +    + + A +++ + D     +L+++  +S ++ +
Sbjct: 146 GEVQAQLAEIARIEASQVGDIAAQRATIARIEAEVNNARADFERYYSLYQRGGISASERD 205

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            +   +  +   L E I     +     +   +A             D+   +      +
Sbjct: 206 TRRLTLTTAEQRLAEAIAVLSRIQTTSQQQLSQARSTLNRIEDVRPVDVSAARAEVQAAI 265

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRA 332
           + +   +   +Q  + SP+AG I+          A+  +      +  I   ++     A
Sbjct: 266 AAVAEAQANLDQAYVKSPVAGQIIEVH-------ARPGETVSSDGIATIG-QNQQMMAIA 317

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +V    I+ V+ G +A V     + +     +  +E+I   + +Q+
Sbjct: 318 EVYQDDIRKVEIGQSAVVT----SPVITVPLQGTVEQIGFQVERQE 359


>gi|99034842|ref|ZP_01314755.1| hypothetical protein Wendoof_01000420 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 341

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 69/213 (32%), Gaps = 23/213 (10%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--EFANYLKEISRDLE 267
           A+   D  + +R      +E  + I + +     + +   E +   +           +E
Sbjct: 79  AIYLPDGEKVKRDDVVLKIEDYDRIEQAQKAKALLKQREIEYDSSHKLNKKGYGAQIQVE 138

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
                     + L  LE   E   + SPI G I    +    ++    Q +  +V   ++
Sbjct: 139 AAFTALQSAKADLKRLELDLENTAVTSPIDGYIDKINAN-EGDFVNAGQKIADVVNFDQI 197

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +   V+  ++  ++ G TA +       +  K+    +  I  I   +  +      Y
Sbjct: 198 LVV-LYVSENEVNKIELGSTAQINL-----LDGKELAGEVSFISKIAEPKTGS------Y 245

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            V +K+T+            G  A V   +   
Sbjct: 246 RVEVKVTNNTLQ--------GLTANVRLPSGER 270


>gi|110598284|ref|ZP_01386559.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
 gi|110340092|gb|EAT58592.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
          Length = 332

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 62/207 (29%), Gaps = 14/207 (6%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           ER +            +        + +   A+   A Y    +              ++
Sbjct: 132 ERKLNADLGRNNNLRRQDVVSQAEFDAVRAGADAAKAQYAS-ATSQRGAAAAQVKMREAE 190

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L   E      TI +P +G I   +S     Y    Q L+ IV  S   ++ A     Q+
Sbjct: 191 LRNAELQLSYTTITAPASGHISR-KSVQPGQYVAPGQQLIAIV-GSNKLWVVANFKETQL 248

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----L 391
             +  G    +    Y     K+FK  IE I      +      +  +  + +V     +
Sbjct: 249 DKITPGLPVIIHVDAYP---GKEFKGKIESISSGTGAKFSLLPPDNASGNFIKVAQRVPV 305

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAK 418
           KI      D   +L  G    V    K
Sbjct: 306 KIVFTETPDKAQQLAAGMNVVVEVRVK 332



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 46/148 (31%), Gaps = 9/148 (6%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E +V  + S   G ++   V++   + QG  ++  E  +     D+   ++++ R  +  
Sbjct: 61  EGDVYPVISRIPGKVQDVLVDDNRIVKQGETVIRLEAADYEVRRDIASAALQSARASV-- 118

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  L  + +    A   R+                V      +V         +  
Sbjct: 119 -------LAAEANANAAAATERKLNADLGRNNNLRRQDVVSQAEFDAVRAGADAAKAQYA 171

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLT 200
           S    R     +  +  A L + +  L+
Sbjct: 172 SATSQRGAAAAQVKMREAELRNAELQLS 199


>gi|89889563|ref|ZP_01201074.1| putative membrane fusion efflux protein, HlyD family [Flavobacteria
           bacterium BBFL7]
 gi|89517836|gb|EAS20492.1| putative membrane fusion efflux protein, HlyD family [Flavobacteria
           bacterium BBFL7]
          Length = 423

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 79/264 (29%), Gaps = 55/264 (20%)

Query: 171 MRSIYLNRLDLENKSS---LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             S+  +R  L N  +     +A L   + +      LFEK  +SQ+D +       ++ 
Sbjct: 99  QSSVSRSRAGLANAKAGFEQAKASLVEAKANYGRSATLFEKGVISQSDFDAAIAAYDRAK 158

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              R      ++    +NE                                         
Sbjct: 159 ASERSAYFTVQSAGATVNE------------------------------------ASDNL 182

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            + +I +P+ GTI                     L++ V       +   V    I  + 
Sbjct: 183 GRTSIFAPMTGTISLLAVELGERVVGTQQMAGTELLR-VADLSQMEVEVDVNENDIVKIA 241

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD--- 400
            G  A V    Y    +KKF+  + +I    + Q +  Q   + +V ++I   +++D   
Sbjct: 242 VGDKAIVEVDAY---LKKKFEGSVTEIANTATGQLSADQVTNF-KVKVRILPESYTDLTE 297

Query: 401 ----NNIELRNGFPAEVLFTAKNT 420
               N    + G  A V    +  
Sbjct: 298 GKPENYSPFKPGMTATVDIITREK 321



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 70/232 (30%), Gaps = 2/232 (0%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +VS++G+I  E  V  I     G I +  +  G  + +G  L           +   + 
Sbjct: 49  ETVSATGKIKPEIEV-SISPEVPGEIIELPIREGQAVKKGDLLARINPDLLQSSVSRSRA 107

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            + N +   +  K++L      Y      FE       DF     +      +   +   
Sbjct: 108 GLANAKAGFEQAKASLVEAKANYGRSATLFEKGVISQSDFDAAIAAYDRAKASERSAYFT 167

Query: 162 RSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                      S  L R  +    +  +  L     + +   + +     +   DL+Q E
Sbjct: 168 VQSAGATVNEASDNLGRTSIFAPMTGTISLLAVELGERVVGTQQMAGTELLRVADLSQME 227

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             V  +  ++ +     K ++     L  +            +  L  +Q T
Sbjct: 228 VEVDVNENDIVKIAVGDKAIVEVDAYLKKKFEGSVTEIANTATGQLSADQVT 279


>gi|270260818|ref|ZP_06189091.1| putative membrane protein [Serratia odorifera 4Rx13]
 gi|270044302|gb|EFA17393.1| putative membrane protein [Serratia odorifera 4Rx13]
          Length = 328

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 93/255 (36%), Gaps = 21/255 (8%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS---QNDLNQQERIVY 224
           +  ++    N    + K +LL A      +++  +++   +   +    +   ++++ ++
Sbjct: 81  INALQQAQANVASAKAKLALLMAGY--RAEEIAQVRSEVAQRLSAFNYADSFLKRQQGLW 138

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTIL 283
                  + + + +            +  + + YL     +++E+ +   A   + L   
Sbjct: 139 AKNATSADALEDARTSRNQAQANLQASKDKLSQYLSGNRPQEIEEAKANLAQNEAALAQA 198

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +      T++SP AGT++  ++            +  +   ++  ++RA V    +    
Sbjct: 199 QLNLHDTTLVSPSAGTVLT-RAVEPGTMLSAGGTVFTLS-LTRPVWVRAYVNESSLGKAV 256

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAF 398
            G    +   +      K +   I  + P       S +  +L+T   Y + + +TD   
Sbjct: 257 PGAELEI---YTDGRPNKPYHGKIGFVSPTAEFTPKSVETPDLRTDLVYRLRVIVTDA-- 311

Query: 399 SDNNIELRNGFPAEV 413
              + ELR G P  V
Sbjct: 312 ---DDELRQGMPVTV 323



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 93/295 (31%), Gaps = 29/295 (9%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V+ G  +  G  L   +D    + +   + ++ + +  +    +       + 
Sbjct: 53  GRLASLTVDEGDPLQPGQLLGKLDDAPYINALQQAQANVASAKAKLALLMAGY---RAEE 109

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               ++  ++     ++   +      ++    +S       + +R ++    + +L+  
Sbjct: 110 IAQVRSEVAQRLSAFNYADSFLKRQQGLWAKNATSADALEDARTSRNQA----QANLQAS 165

Query: 185 SSLLRALLSSH--QKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
              L   LS +  Q+      NL + + A++Q  LN  +  +   +         +   +
Sbjct: 166 KDKLSQYLSGNRPQEIEEAKANLAQNEAALAQAQLNLHDTTLVSPSAGTVLTRAVEPGTM 225

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                     +L    +   +   + ++    A   ++L I    R  K    P  G I 
Sbjct: 226 LSAGGTVFTLSLTRPVW---VRAYVNESSLGKAVPGAELEIYTDGRPNK----PYHGKIG 278

Query: 302 YNQ---SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ-HVKKGYTATVRF 352
           +      F+  +                    R +V        +++G   TVRF
Sbjct: 279 FVSPTAEFTPKSVETPD--------LRTDLVYRLRVIVTDADDELRQGMPVTVRF 325


>gi|15597585|ref|NP_251079.1| PvdR [Pseudomonas aeruginosa PAO1]
 gi|9948430|gb|AAG05777.1|AE004665_4 PvdR [Pseudomonas aeruginosa PAO1]
 gi|60279958|gb|AAX16303.1| PA2389 [Pseudomonas aeruginosa]
          Length = 391

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           ++R        +  + +  +I L  W                   IE SVS+ G +    
Sbjct: 1   MRRTRSTRRALLVAVCLSPLIALAAWQAYPFRSNNFDTVSVSRGSIESSVSALGTLQPRR 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ +  SG I+K  VE G  + +G  L+  +       +D  + SI+ L+  +  ++
Sbjct: 61  YV-DVGAQASGQIRKLHVEAGDDVTEGQLLVEIDPSTQQAKVDAGRYSIEMLKAQLAEQR 119

Query: 115 SA---LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +          +   L     +R E +     +  +T +++  +   I     SL+    
Sbjct: 120 AQYTLARQQYQRQQRLAAGGATRTEDVQSAQAQMLATQARIEMYQAQIRQAQASLRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 EL 181



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 75/236 (31%), Gaps = 30/236 (12%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++ + +    ++   L    ++++  L        E        +      +E  Q   
Sbjct: 108 IEMLKAQLAEQRAQYTLARQQYQRQQRLAAGGATRTEDVQSAQAQMLATQARIEMYQAQI 167

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIR 331
               + L   E       I +P++GT+V   +          Q  PL+  +       + 
Sbjct: 168 RQAQASLRSDEAELGYTRIYAPMSGTVVAVDAR-EGQTLNAQQQTPLILRIAKLSPMTVW 226

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY----- 386
           A+V+   I  VK G  A   F   +    +++   + +I P+  +  +            
Sbjct: 227 AQVSEADIGRVKPGMPAY--FTTLS-GEGRRWTGKVRQILPVPPKPLDQSNQGGGSPTSG 283

Query: 387 ------------YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                       Y V++ +      + + +L     A+V F A   T    +  P+
Sbjct: 284 SGGQSGSGRVVLYTVLVDVD-----NGDHQLMAEMTAQVFFVAA--TAENILTAPV 332


>gi|330974320|gb|EGH74386.1| secretion protein HlyD [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 292

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 69/182 (37%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+       +  L +  +I +  W IL                IE SV++ G +    
Sbjct: 1   MKRSRHPRRALLVALCLFPVIAVCAWQILPDSKSSAATVTVTRGTIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  SG I K   + G Q+ +   L+  +       +D  + +I NL+  +  ++
Sbjct: 61  YV-DVGSQASGQIMKIHAQVGDQVKEDDLLVEIDPSTQKAKLDAARYAIDNLKAQLQEQR 119

Query: 115 SALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    K      L     +R E +     ++ +T ++V  F   I     +L+    
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEAQAALRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 AL 181



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 3/134 (2%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 QAALRSDEAALGYTRIFAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTA 348
           +   I HVK G TA
Sbjct: 230 SEADIGHVKPGMTA 243


>gi|152988762|ref|YP_001350563.1| HlyD family secretion protein [Pseudomonas aeruginosa PA7]
 gi|150963920|gb|ABR85945.1| HlyD family secretion protein domain protein [Pseudomonas
           aeruginosa PA7]
          Length = 426

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 53/381 (13%), Positives = 115/381 (30%), Gaps = 92/381 (24%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +     VV + +PF+G ++   V+ G ++ +G  LL  +  E    +   + ++   R
Sbjct: 61  GRLEP-GRVVTLAAPFAGNVEALLVQPGQRVEEGQELLRMDTREIAVQVREARSALLKAR 119

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +                         ++L D+    + T ++           S + K
Sbjct: 120 RTL-------------------------QELRDWERGENMTRARRALRSAQLAQDSTERK 154

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           L   R ++   +   N+   L       + DL   +                        
Sbjct: 155 LRETRQLFGKGIVPRNELDDLEQQARQQRMDLEAAR------------------------ 190

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           LE+     + +     I E+                          A+   K   L+   
Sbjct: 191 LEVEATRSKGQGENLQIAEM------------------------DLANATVKFETLQAQL 226

Query: 288 EQKTILSPIAGTIVYN----------QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + +T+ +P AG IV            +   + +   Q Q L  +    +   + A+V+  
Sbjct: 227 DGRTVRAPFAGIIVVAPGSSNEQGVREPVQTGSKLGQGQALFGLA-SVERLKVSARVSEL 285

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I  +++G    V    +  I     K +   I  +  Q           +  + ++   
Sbjct: 286 DINQLREGQEVEVSGDGFDGI---ALKGV---ISALGGQALPGGTQGSSPQFEVTVSVAH 339

Query: 398 FSDNNIE-LRNGFPAEVLFTA 417
            +   +  +R G  A++  T 
Sbjct: 340 LTPGQLRKIRLGMSAKLAVTT 360


>gi|319763068|ref|YP_004127005.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus
           denitrificans BC]
 gi|317117629|gb|ADV00118.1| efflux transporter, RND family, MFP subunit [Alicycliphilus
           denitrificans BC]
          Length = 449

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 44/151 (29%), Gaps = 14/151 (9%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTY 329
           +  D  + L   E    + +I SPI G ++       +  A   Q   L+ +        
Sbjct: 197 SVQDARAALATDETNVTKASIRSPIDGVVLSRAVEPGNAVAASLQAVTLLTLAEDLSRLR 256

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   V    +  V+ G  A+     Y           +                     V
Sbjct: 257 LEVSVDEADVGAVQPGQQASFTVSAYPSRPYPARTTRVAFGSTKTDN------------V 304

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +  IT L   + ++ LR G  A    T+   
Sbjct: 305 VTYITYLEVDNADLSLRPGMTAAATITSTER 335



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 76/214 (35%), Gaps = 15/214 (7%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             ++++V+++G +    +V  I S  SG +++  V+    + +G  L+  +  +    + 
Sbjct: 72  GQVKLTVAANGTLQPTRSV-NIGSELSGTVRRVLVDVNDAVKKGQVLVELDTTKLEAQV- 129

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                   LR       +          V E        + +  L       +   + G 
Sbjct: 130 --------LRSRASVASAQARLAQAAATVKEARASLARLEEVARLSGGKVPSAAELDTGR 181

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFEKNAVS---- 212
           ++  R+L  +     S+   R  L  +++++ +A + S    + + + +   NAV+    
Sbjct: 182 AAYDRALADEAAAHASVQDARAALATDETNVTKASIRSPIDGVVLSRAVEPGNAVAASLQ 241

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              L      + +  LE+  +  +   +      
Sbjct: 242 AVTLLTLAEDLSRLRLEVSVDEADVGAVQPGQQA 275


>gi|284047654|ref|YP_003397993.1| secretion protein HlyD family protein [Acidaminococcus fermentans
           DSM 20731]
 gi|283951875|gb|ADB46678.1| secretion protein HlyD family protein [Acidaminococcus fermentans
           DSM 20731]
          Length = 346

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 56/362 (15%), Positives = 116/362 (32%), Gaps = 85/362 (23%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            S  I +  VE G ++ +G  L   +        +  K+    L+  I  ++S +D L+N
Sbjct: 62  ESDRIAEELVEEGDKVKKGQVLARLDT-------EELKIKKSKLQAQIAAQQSVVDKLHN 114

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                 +A +    +         +  ++     + + + S + K    +     R  ++
Sbjct: 115 GT----RAEDLEAARAKADEAAAQADQARQDLARVENAFASSQGKSVSKQDRDAARTKVD 170

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
             ++   A    ++K     ++                  V     +L+    + K    
Sbjct: 171 VTAAQAEAARQEYEKAQAGPRD----------------EDVAGGEAQLKALQEDAK---- 210

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
           HI+ L  +A L+                                       +P  G I  
Sbjct: 211 HIDYLLSQAELK---------------------------------------APADGVI-R 230

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           ++     + A   +P+ K+   +   ++R  V+ K +  + +G  A V   +     +  
Sbjct: 231 SRLLEVGDMASPQKPVFKLS-LNDKKWVRVYVSEKDLGRIYEGMKARV---YTDSHPKNP 286

Query: 363 FKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +  I  I         + Q   L+T   YEV + +TD      +  LR G PA V    
Sbjct: 287 IEGQIGYISSTAEFTPKTVQTTELRTSLLYEVRVYVTDP-----DNVLRMGMPATVKIDT 341

Query: 418 KN 419
           + 
Sbjct: 342 EQ 343


>gi|161619010|ref|YP_001592897.1| HlyD family protein secretion protein [Brucella canis ATCC 23365]
 gi|256369485|ref|YP_003106993.1| HlyD family secretion protein [Brucella microti CCM 4915]
 gi|260168766|ref|ZP_05755577.1| HlyD family secretion protein [Brucella sp. F5/99]
 gi|261222228|ref|ZP_05936509.1| multidrug resistance protein mdtN [Brucella ceti B1/94]
 gi|161335821|gb|ABX62126.1| probable protein secretion protein, HlyD family [Brucella canis
           ATCC 23365]
 gi|255999645|gb|ACU48044.1| HlyD family secretion protein [Brucella microti CCM 4915]
 gi|260920812|gb|EEX87465.1| multidrug resistance protein mdtN [Brucella ceti B1/94]
          Length = 366

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 87  LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFNRVSA 146

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 147 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 202

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 203 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFLAVGDPAFTLI-- 249

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 250 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITP 294



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 25/241 (10%), Positives = 70/241 (29%), Gaps = 24/241 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIK 60
           ++    HP   + + ++  +  I +  W             G+ ++ED+       V I 
Sbjct: 12  QDQSPKHPMLRRILLIVGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAIT 63

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG + +  V     + +G  L   +       +D  K ++      +    + L   
Sbjct: 64  PQVSGQVIRVAVGPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKL----AGLVLT 119

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +        +       +   +  +     F            +++ +          
Sbjct: 120 YKQQLASVAQAKDDVTFAQEQFNRVSALVHDKFEARAQFDQAERALQVAKQEQNAAASAA 179

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
               + L   L    Q+  +    L  K   ++ +L ++   + +        + + +N+
Sbjct: 180 AATLAQLGGTLDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPFAGTVTQVENI 233

Query: 241 L 241
            
Sbjct: 234 Q 234


>gi|108763876|ref|YP_629250.1| cation efflux system protein CusB [Myxococcus xanthus DK 1622]
 gi|108467756|gb|ABF92941.1| cation efflux system protein CusB [Myxococcus xanthus DK 1622]
          Length = 393

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 88/261 (33%), Gaps = 22/261 (8%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-----KNAVS 212
            +  +S  +++  +R   +     + + S +   L +  +     K+L +        + 
Sbjct: 59  RAELQSGIIRVDDLRRQRIGVKTAKVEQSSMDLSLRALGRVTFDEKSLVDVTLKLDGYIH 118

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  +N     V K  +       E     +         +   A+ +    + L +    
Sbjct: 119 ELRVNATGEPVKKGDVLFTLYSPELYAAQQEYLLARQSQSAANASLVGAARKRL-ELWGL 177

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A ++ ++    +  E    L+P +G ++           +  + L +I P     ++ A
Sbjct: 178 SAAQIERVAQRGQPVENMPFLAPASGYVLEKNVV-EGAAVKAGERLFRIAPL-AKVWVEA 235

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  + +  VK G+   V  P    +  KK+   +  + P +              + ++
Sbjct: 236 DVYEQDLARVKPGHPVEVTLP---YLPGKKYAGSVGYVYPSLQGATRTG------RIRIE 286

Query: 393 ITDLAFSDNNIELRNGFPAEV 413
           + +       +EL+    A+V
Sbjct: 287 LPNPE-----LELKPDMYADV 302


>gi|312879387|ref|ZP_07739187.1| secretion protein HlyD family protein [Aminomonas paucivorans DSM
           12260]
 gi|310782678|gb|EFQ23076.1| secretion protein HlyD family protein [Aminomonas paucivorans DSM
           12260]
          Length = 328

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 87/271 (32%), Gaps = 24/271 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                ++     +      L       R   L       ++   RA  +    D   M+ 
Sbjct: 81  QMEAQTRRDRAALERNRAVLADLEAGARGQELREARANVRAQEARAAHALA--DWKRMRT 138

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           LF++  V+Q DL++   +   +   L         +     E   +A         E   
Sbjct: 139 LFDEGVVAQADLDRVREVRDVTAGNLEAARQRLALLEAGTREQTLQAQ-RLEVKRAEAVV 197

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           ++++  +                  +T+ +P++G ++  ++     Y      L   V  
Sbjct: 198 EIDEALQ----------------GDQTVRAPLSGVVLS-RNREPGEYVVPGSVLAT-VGD 239

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
            +  ++R  V   Q+  V+ G TA ++   Y D     F+  + +I            TQ
Sbjct: 240 LEDCWVRIYVASTQLGRVRLGQTARLKVDSYPDRT---FRGKVTEIAQEAEFTPRQTLTQ 296

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           E    ++    +   +    L+ G P +V  
Sbjct: 297 EERANLVFFVKVKIENPQGILKPGLPVDVEL 327


>gi|298250515|ref|ZP_06974319.1| secretion protein HlyD family protein [Ktedonobacter racemifer DSM
           44963]
 gi|297548519|gb|EFH82386.1| secretion protein HlyD family protein [Ktedonobacter racemifer DSM
           44963]
          Length = 547

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 60/391 (15%), Positives = 116/391 (29%), Gaps = 67/391 (17%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSP----FSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    I + VS++G +         + P     +G I +  V+ G  + +G  L      
Sbjct: 72  ATTGNISVKVSATGPVAANA-----QYPLNFGTAGQISEIDVQIGQHVTKGQKLAKV--- 123

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               ++D   +     +  +D   SA D LN+  +    A+        + + K     +
Sbjct: 124 ----VVDTTTLQDNIAQAQLDV-NSARDSLNSAINSAGTAW--------NNVSKQQGVNT 170

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
              N         L            N  + +      +   +  QK            A
Sbjct: 171 ANLNLAYDQEQSDLS---------KCNDANAQVTCQQAKDKYAQAQKQADSSNTSTYNQA 221

Query: 211 VS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           VS QN +   +  + K+ L L   I +      + N +           +  I+  + QN
Sbjct: 222 VSAQNQVTSAQDNLNKALLSL--TIAQHALANANTNAVL---QSPVDATVATINGTIGQN 276

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
             +     S       +    +           + S SS  +         I+  +    
Sbjct: 277 VSSSGSVSSSSGGGSSSSSSSS----------SSSSSSSQGFI--------ILTDTGKLM 318

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A++    I  ++ G  A      Y     +   A I  I  + S   N       Y V
Sbjct: 319 VSAQINEADIGSIQVGQPAQFTLAAYPSQTFRASVASINTIGQVTSNVVN-------YTV 371

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +L + + +    +  +  G  A V  T    
Sbjct: 372 MLAVDNQSI--GSARVYPGMTATVNITTAQR 400


>gi|226940299|ref|YP_002795373.1| secretion protein HlyD [Laribacter hongkongensis HLHK9]
 gi|226715226|gb|ACO74364.1| secretion protein HlyD [Laribacter hongkongensis HLHK9]
          Length = 379

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 88/255 (34%), Gaps = 11/255 (4%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           ++     +L       R L++   +   ++       A +  DL ++E      ++ L E
Sbjct: 88  AVARAEAELAQTVRQTRTLITGQTRLEAVVAERRALVAKAAGDLKRREAASADQSIAL-E 146

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           ++   ++           A  E     + +  D        A   ++L       E+  I
Sbjct: 147 DLQHARDAYSQAQAALQTAEAELQAQRELVMNDAVAKHPQVARAAAQLREAALMLERTRI 206

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++PI G I   +S       Q   PLM +VP  +  ++ A     Q++ ++ G   TV  
Sbjct: 207 VAPIDGQIAK-RSAQIGMRVQTGAPLMALVPL-QTMWVDANFKESQLKDIRIGQPVTVHA 264

Query: 353 PHY-ADIREKK-------FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             Y  D+  +            +  + P  +   N ++  +   V + +     + + + 
Sbjct: 265 DVYGNDVSYRGQVAGLSAGTGSVFSLLPPQNATGNWIKVVQRVPVRITLDARDLAAHPLR 324

Query: 405 LRNGFPAEVLFTAKN 419
           L       V   +++
Sbjct: 325 LGLSMHVSVDTRSQD 339



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/193 (10%), Positives = 59/193 (30%), Gaps = 15/193 (7%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
             N++ + +  +G +     ++  ++  G  L+  +D +        ++++      +  
Sbjct: 46  AGNLIPVSAQTAGTVTVVGADDTQRVKTGQELVRLDDADA-------RLAVARAEAELAQ 98

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  L      LE     R   +    G      +   +  I+     L+       
Sbjct: 99  TVRQTRTLITGQTRLEAVVAERRALVAKAAGDLKRREAASADQSIA-----LEDLQHARD 153

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYKSTLE 229
           +    +  L+   + L+A       D         + A    +   + ++ RIV     +
Sbjct: 154 AYSQAQAALQTAEAELQAQRELVMNDAVAKHPQVARAAAQLREAALMLERTRIVAPIDGQ 213

Query: 230 LRENIHEQKNMLR 242
           + +   +    ++
Sbjct: 214 IAKRSAQIGMRVQ 226


>gi|159184930|ref|NP_354799.2| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
 gi|159140209|gb|AAK87584.2| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
          Length = 432

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 69/212 (32%), Gaps = 16/212 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD-EANLEFANYLKEISRD-LEQN 269
           ++  L   +  V K+  +L       + +   +      + +L+ A +  + +   L+ N
Sbjct: 133 ARAKLASAKANVLKARADLGSAKTSMERLRSLVQSRVSSQQDLDAAQFTHDAAAATLQVN 192

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKL 327
           + T     + L + E    +  I+SPI G I+       +  A    +  L  I    + 
Sbjct: 193 EATVLSAEADLRLAEVNLGKAKIVSPIDGVILTRSVDPGATVASSLNAPVLFTIAGDLRH 252

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++  V    +  V+ G  AT     Y D         +      +S           Y
Sbjct: 253 MELQVSVDEADVGKVETGQKATFNVDAYPDRSFPAEIETVRFASETVSNVVT-------Y 305

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + IL + +         LR G  A      + 
Sbjct: 306 KGILTVDNAELL-----LRPGMTATANIIVEE 332



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 51/142 (35%), Gaps = 1/142 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + V+S+G +   D V +I S  SG ++K  V   + +  G  L   +  +    +   
Sbjct: 75  LSVIVTSTGSVQPTDQV-DISSELSGTVRKVNVTYNTPVKSGDILAELDTNKLEADVQSA 133

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  + + + ++   ++ L       + L    +SR     D      +  +      ++ 
Sbjct: 134 RAKLASAKANVLKARADLGSAKTSMERLRSLVQSRVSSQQDLDAAQFTHDAAAATLQVNE 193

Query: 160 VYRSLKMKLTRMRSIYLNRLDL 181
                     R+  + L +  +
Sbjct: 194 ATVLSAEADLRLAEVNLGKAKI 215


>gi|27367681|ref|NP_763208.1| multidrug resistance efflux pump [Vibrio vulnificus CMCP6]
 gi|27359253|gb|AAO08198.1|AE016812_180 Multidrug resistance efflux pump [Vibrio vulnificus CMCP6]
          Length = 369

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 70/207 (33%), Gaps = 21/207 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + F   + +    L+      ++        +      R  +++ +K++   + L E+ 
Sbjct: 91  PRPFELAVKAARFDLQKAAQSYQADSAAINVAKANEVAARVRVANARKNVERNRVLVERG 150

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +SQ  ++     +  +   L              +   ++A  EF    KE        
Sbjct: 151 TISQAAMDNMVAELDTAEANL-----------AQASSALEKAKQEFGPRGKE-------- 191

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                  +++L           +L+P  G I      +  +YA   QPL+  V ++   +
Sbjct: 192 NPEIQAVLNRLEQALLNLNHTKLLAPADGVITNMDV-AVGDYAGAGQPLLTFV-NNHSLW 249

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYA 356
           + A V    + ++K G    + F  Y 
Sbjct: 250 LTAMVRENSLAYLKTGDKVKIVFDAYP 276



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/202 (9%), Positives = 58/202 (28%), Gaps = 14/202 (6%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            N K     S        +I +     W+     +     + +      V+ I    SG 
Sbjct: 14  DNKKLKQARSFTYYIFAVVIALWVYTLWA-----DRVTPMTDQARVNGQVIRISPEVSGP 68

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V N + +  G  L+  +          +   +       D +K+A  +  +   +
Sbjct: 69  ISQIHVANNATVKAGDELVNIDP---------RPFELAVKAARFDLQKAAQSYQADSAAI 119

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                     ++     + +   ++V     +    ++   +  + +   N     +   
Sbjct: 120 NVAKANEVAARVRVANARKNVERNRVLVERGTISQAAMDNMVAELDTAEANLAQASSALE 179

Query: 187 LLRALLSSHQKDLTMMKNLFEK 208
             +       K+   ++ +  +
Sbjct: 180 KAKQEFGPRGKENPEIQAVLNR 201


>gi|37675808|ref|NP_936204.1| multidrug resistance efflux pump [Vibrio vulnificus YJ016]
 gi|37200347|dbj|BAC96174.1| multidrug resistance efflux pump [Vibrio vulnificus YJ016]
          Length = 369

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 70/207 (33%), Gaps = 21/207 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + F   + +    L+      ++        +      R  +++ +K++   + L E+ 
Sbjct: 91  PRPFELAVKAARFDLQKAAQSYQADSAAINVAKANEVAARVRVANARKNVERNRVLVERG 150

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +SQ  ++     +  +   L              +   ++A  EF    KE        
Sbjct: 151 TISQAAMDNMVAELDTAEANL-----------AQASSALEKAKQEFGPRGKE-------- 191

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                  +++L           +L+P  G I      +  +YA   QPL+  V ++   +
Sbjct: 192 NPEIQAVLNRLEQALLNLNHTKLLAPADGVITNMDV-AVGDYAGAGQPLLTFV-NNHSLW 249

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYA 356
           + A V    + ++K G    + F  Y 
Sbjct: 250 LTAMVRENSLAYLKTGDKVKIVFDAYP 276



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/202 (9%), Positives = 58/202 (28%), Gaps = 14/202 (6%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            N K     S        +I +     W+     +     + +      V+ I    SG 
Sbjct: 14  DNKKLKQARSFTYYIFAVVIALWVYTLWA-----DRVTPMTDQARVNGQVIRISPEVSGP 68

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  + N + +  G  L+  +          +   +       D +K+A  +  +   +
Sbjct: 69  ISQIHIANNATVKAGDELVNIDP---------RPFELAVKAARFDLQKAAQSYQADSAAI 119

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                     ++     + +   ++V     +    ++   +  + +   N     +   
Sbjct: 120 NVAKANEVAARVRVANARKNVERNRVLVERGTISQAAMDNMVAELDTAEANLAQASSALE 179

Query: 187 LLRALLSSHQKDLTMMKNLFEK 208
             +       K+   ++ +  +
Sbjct: 180 KAKQEFGPRGKENPEIQAVLNR 201


>gi|237801110|ref|ZP_04589571.1| secretion protein HlyD [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023967|gb|EGI04024.1| secretion protein HlyD [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 390

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 70/182 (38%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+       +  L +  +I +  W IL                +E SV++ G +    
Sbjct: 1   MKRSRHLRRALLVALCLFPVIAVCAWQILPDARSNASTVTVTRGTVENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  SG I K   + G Q+ +G  L+  +       +D  + +I NL+  +  ++
Sbjct: 61  YV-DVGSQASGQIMKIHAQVGDQVNEGDLLVEIDPSTQKAKLDAARYAIDNLKAQLQEQR 119

Query: 115 SALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +  +    K      L     +R E +     ++ +T ++V  F   I     +L+    
Sbjct: 120 ALHELAEQKQQRQKSLAAGGATRAEDVQAAQSEFRATQARVDMFKAQILEAGAALRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 AL 181



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 10/212 (4%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKSLAAGGATRAEDVQAAQSEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P++GT+V   +          Q  PL+  +       + A+V
Sbjct: 171 GAALRSDEAALGYTRIYAPMSGTVVALDAR-EGQTLNAQQQTPLILRIARLSPMTVWAEV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY------- 387
           +   I HVK   TA        D R       I  + P    Q N               
Sbjct: 230 SEADIGHVKPDMTAYFTTLSGGDRRWSSTVRQILPVPPRPLDQANQGGGSPSSSRKSGGG 289

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            V+L    L   +++  L     A++ F A  
Sbjct: 290 RVVLYTVLLDVDNSDQALMAEMTAQIFFVAGK 321


>gi|188588950|ref|YP_001919754.1| efflux transporter, RND family, MFP subunit [Clostridium botulinum
           E3 str. Alaska E43]
 gi|188499231|gb|ACD52367.1| efflux transporter, RND family, MFP subunit [Clostridium botulinum
           E3 str. Alaska E43]
          Length = 408

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/350 (13%), Positives = 100/350 (28%), Gaps = 92/350 (26%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I+K     G ++ +G  LLT +  +  + +          +     E +  ++ N  
Sbjct: 67  GGTIEKTYASLGQEVKKGDILLTLKGDDVNNSLS---------QAKAALELAQANYNNTT 117

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              +E                                                    LEN
Sbjct: 118 SGTIES-----------------------------------------------QTNQLEN 130

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
              L +      +++  M   L++ +A+S++   + E  + ++  +L  +I +       
Sbjct: 131 SVKLAQLQYDEAKRNYDMYSALYQADAISEDQYKKIELSLNQAKQQL--DIAQ------- 181

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                           +   + LEQ + +         +      + T++SP+ G I   
Sbjct: 182 -KSYTTTTEKNIPELQELAEKQLEQAKVS-------YDVATSNLNKLTLVSPVDGVITAK 233

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              S +    Q QP   I        +   V    I     G    V          +  
Sbjct: 234 NCDS-NEMISQQQPAFVIS-SPNTLEVNINVAQSDINKFSAGQDVEVVVD------GQTI 285

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
              +E +  ++  Q         Y++ + I      +++  L+ G   EV
Sbjct: 286 NGKVEYVPLVVDSQT------SLYQIKILID-----NSSNTLKAGMSVEV 324


>gi|188990102|ref|YP_001902112.1| membrane fusion protein [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167731862|emb|CAP50046.1| membrane fusion protein [Xanthomonas campestris pv. campestris]
          Length = 363

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 89/306 (29%), Gaps = 29/306 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V + A   R + L     + ++   +     + +   +L     +  S      +  
Sbjct: 77  QVPVQDFAHVRRGQLLAKIDDRIYAQQLEQAKAQLQTTQANLANWEQQRHSAEATIAEQR 136

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  +A     +      + L  +  VS+ D               R+     +    
Sbjct: 137 ATLSSNQAQRDRTRSAYARAQQLANQKLVSEQD---------------RDTAFAARAQAD 181

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                   A        + ++ +    +   A+  + + + +   +   IL+P  G +  
Sbjct: 182 AGVAQARAAVQAAEENARSVTVNRAALEAAVANAQAAVQLAQINLDNTRILAPRDGQLGQ 241

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP     ++ A     Q+ +V+ G  A+      A+ R   
Sbjct: 242 LGVR-QGAYVTNGTQLMALVP--DTLWVVANFKETQMANVRVGQRASFTVDALANAR--- 295

Query: 363 FKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
            +  +++I P        + +        +    + L+I+          LR G    V 
Sbjct: 296 LQGRVQEISPAAGSEFSVLRADNATGNFVKIAQRIPLRISVDPGQPQAARLRPGMSVVVA 355

Query: 415 FTAKNT 420
                 
Sbjct: 356 IDTAQR 361



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 50/145 (34%), Gaps = 7/145 (4%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L++IG+  ++    L P   +V  +   +    V  I    SG + +  V++ + + +G 
Sbjct: 31  LALIGVALVLYAWRLPPFTSAVERTENAMVHGQVTVIAPQVSGYVTQVPVQDFAHVRRGQ 90

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L   +D        +    ++  +  + T ++ L     +    E     +   L    
Sbjct: 91  LLAKIDD-------RIYAQQLEQAKAQLQTTQANLANWEQQRHSAEATIAEQRATLSSNQ 143

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMK 167
            +   T S        +  + +  +
Sbjct: 144 AQRDRTRSAYARAQQLANQKLVSEQ 168


>gi|83591144|ref|YP_431153.1| secretion protein HlyD [Moorella thermoacetica ATCC 39073]
 gi|83574058|gb|ABC20610.1| Secretion protein HlyD [Moorella thermoacetica ATCC 39073]
          Length = 231

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 55/161 (34%), Gaps = 12/161 (7%)

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            +DLE +  + A     L        QK  I SPI G ++ +++      A     L  I
Sbjct: 74  RQDLESSLTSSAVNPQALGTAAGVMAQKAEIKSPIDGQVIQSKAL-VGEMAAPGMALA-I 131

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ---- 377
           +  ++  YI A +    I+ VK G    V    + D     F   +  I    +      
Sbjct: 132 IADTEHLYISANIKETVIEKVKVGQVVDVTIDAFPDRH---FSGRVTSIGRATTSVFSLL 188

Query: 378 DNNLQTQEYYEVI--LKITDLAFSDNNIELRNGFPAEVLFT 416
                   Y +V   + +       ++++L  G  A V   
Sbjct: 189 PAQNSNGNYTKVTQVIPVKIQLLDASDVKLLPGMNATVRIH 229


>gi|269963538|ref|ZP_06177863.1| Multidrug resistance efflux pump [Vibrio harveyi 1DA3]
 gi|269831713|gb|EEZ85847.1| Multidrug resistance efflux pump [Vibrio harveyi 1DA3]
          Length = 407

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/383 (12%), Positives = 117/383 (30%), Gaps = 79/383 (20%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS--- 64
           N      A L  +  L  + +  +       P++    S G ++   +V     P S   
Sbjct: 23  NKATKSFAYLGGLGWLMFVWVGLI----NFTPMD---LSGGSVVQSPHVQL--RPDSTNV 73

Query: 65  -GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    ++   Q+ +G  +   +  +    ++   VS  + R  + T K  ++     
Sbjct: 74  KGKVDHIYIKPNQQVEKGQLIYELDPTQYEIALNQANVSADSARVALATAKGDIEIEEAN 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           ++ L +  E+ + QL           +   +Y +        ++  R+    +   D++ 
Sbjct: 134 HEALVQDLETSKSQL----------EAAKVDYKLQKKMLDRYVEQNRVVQNTITESDIDK 183

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +SS +                      ++++++   E  + K  +++             
Sbjct: 184 QSSTVD---------------------MARHNVLTLESQIKKKQVDI-----------SR 211

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                 +A L       E+ +              ++   +       + +P  G +   
Sbjct: 212 AKLAIHKAELAVETKQAELRQA-----------EEQIAKAQWDLNSTKVHAPSDGFVTNF 260

Query: 304 QSFSSSNYAQQSQPL-MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                         + M     +   Y+  +V  + I+++K G  A      ++      
Sbjct: 261 ILR-EGQRVSAMPRINMY----TNEKYVLMRVNHQAIRNIKPGQPAE-----FSSSVYPG 310

Query: 363 --FKAIIEKIDPIISQQDNNLQT 383
             F A +E I     +   NL  
Sbjct: 311 KIFSATVEGIVEATGESQGNLMG 333


>gi|37676340|ref|NP_936736.1| multidrug resistance efflux pump [Vibrio vulnificus YJ016]
 gi|37200882|dbj|BAC96706.1| multidrug resistance efflux pump [Vibrio vulnificus YJ016]
          Length = 357

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 84/259 (32%), Gaps = 24/259 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +  +      A E+++ Q ++         ++ +   +     + ++ + +   
Sbjct: 66  RAKILSVAPQVQGQVVAVEAKDFQAVNKGDLLLKIDARPYLLAVKQAKAAYQLAVQQHDV 125

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 +        R+ L+  Q +   + +L  +   S  DL+  +  +  +   L + 
Sbjct: 126 ADKQVTEAVAGLDAARSNLTEAQLEYKRIDSLVTRKLASAQDLDTAKNKLANAQASLEQA 185

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +  + +  E   EA +      +                   L   E       I 
Sbjct: 186 RASVEKAIANRGEEGAEAAVVQQAAAQ-------------------LAQAELNLSYTDIT 226

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ G      +    +     Q L  ++      ++RA      + H+K G  A V   
Sbjct: 227 SPVDGIAGEINTH-VGSVVAVGQTLFPVI-IKDSYWVRANFKETDLTHIKPGMEAEVVID 284

Query: 354 HYADIREKKFKAIIEKIDP 372
            Y D     +KA +E++ P
Sbjct: 285 MYPDR---VWKATVEELSP 300


>gi|117921352|ref|YP_870544.1| secretion protein HlyD family protein [Shewanella sp. ANA-3]
 gi|117613684|gb|ABK49138.1| secretion protein HlyD family protein [Shewanella sp. ANA-3]
          Length = 364

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 85/268 (31%), Gaps = 20/268 (7%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           ++   + D E   + ++A     +     ++ +      S  D  +QER+  +    +  
Sbjct: 88  ALAKAKSDYETVLNSVKANNEGVKAAEAKLQAMRASYNNSVKDAERQERLYRQDPGAISV 147

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              E     R        A         E +    +N        S +   E+ R+   +
Sbjct: 148 RRLEIAQASRETASSQVTAAEADVRRAIEAAGVNGENNSQLLSARSAVNKAERDRQNTHV 207

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++P  G I    +     +     P M ++      +I A +T   + ++K G   ++  
Sbjct: 208 VAPSRGVITDLNTD-VGQFINAGAPAMTLIAIHD-VWISADLTENNLGNIKVGNRVSILL 265

Query: 353 PHYADIREKKFKAIIEKID--------------PIISQQDNNLQTQEYYEVILKITDLAF 398
                +  + F   I  I               P +S   + L+  + + V +  +    
Sbjct: 266 ---DSMPGQLFSGQIRSIGYGVDDGKKQAVGSLPTVSNSRDWLRQAQRFPVKVSFSADDM 322

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEI 426
                 LR G  A++L   +   L   +
Sbjct: 323 PPA-ANLRVGGQADILVYTEEHGLMNPL 349



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 81/251 (32%), Gaps = 18/251 (7%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           + P          ++       I +  +G I K  V++   + +G PL   +       +
Sbjct: 36  MTPYSSQARVQAFVVP------IATEVTGQILKVYVQDNQDVAEGAPLFDIDPEPYDIAL 89

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              K   + +   +      +     K   +  ++ +  +        Y      +    
Sbjct: 90  AKAKSDYETVLNSVKANNEGVKAAEAKLQAMRASYNNSVKDAERQERLYRQDPGAISVRR 149

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +     S +   +++            ++ + RA+ ++        + L  ++AV++ + 
Sbjct: 150 LEIAQASRETASSQV---------TAAEADVRRAIEAAGVNGENNSQLLSARSAVNKAER 200

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           ++Q   V   +   R  I +    +         A    A +   IS DL +N       
Sbjct: 201 DRQNTHVVAPS---RGVITDLNTDVGQFINAGAPAMTLIAIHDVWISADLTENNLGNIKV 257

Query: 277 MSKLTILEKTR 287
            ++++IL  + 
Sbjct: 258 GNRVSILLDSM 268


>gi|90569601|gb|ABD94672.1| putative multidrug resistance protein A [Pseudomonas aeruginosa]
          Length = 402

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 76/208 (36%), Gaps = 17/208 (8%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL------- 230
           RL+  ++  +     ++  K    +++L+ + + ++ DL Q++  V K+  +L       
Sbjct: 95  RLNPVDQEIIYERARAALAKATRSVRSLYLQVSEAKADLVQRQADVKKAKTDLARRMRIA 154

Query: 231 ------RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                 RE I   ++ L+      D      +  L ++   + ++    A   + L    
Sbjct: 155 SVGAVSREEISHAEDALKSALAAQDSTQQILSQRLAQVDNTVIRSHPDVATAAASLREAY 214

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
             R++  I +P+ G I          +      LM +VP     ++ A     Q++ ++ 
Sbjct: 215 IARKRTIIPAPVDGMITKRNV-QVGQHIGAGVALMSVVPLDS-LWVTANFKESQLEDIRI 272

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDP 372
           G    +    Y       +   +  +D 
Sbjct: 273 GQPVELTADMYGSDV--VYHGEVVGLDA 298



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/164 (12%), Positives = 56/164 (34%), Gaps = 5/164 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV++ +   G +     ++   +  GTPL+    ++   + +  + ++   +    
Sbjct: 61  VNGNVVQVTAQIDGTVIAIHADDTDHVKAGTPLVRLNPVDQEIIYERARAALA--KATRS 118

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                L     K D++++  + ++ +         ++   V    IS    +LK  L   
Sbjct: 119 VRSLYLQVSEAKADLVQRQADVKKAKTDLARRMRIASVGAVSREEISHAEDALKSALAAQ 178

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            S       L  + + +   +     D+        +  +++  
Sbjct: 179 DSTQQI---LSQRLAQVDNTVIRSHPDVATAAASLREAYIARKR 219


>gi|107101833|ref|ZP_01365751.1| hypothetical protein PaerPA_01002878 [Pseudomonas aeruginosa PACS2]
 gi|116050330|ref|YP_790853.1| hypothetical protein PA14_33770 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218891635|ref|YP_002440502.1| putative ABC export system, membrane fusion protein [Pseudomonas
           aeruginosa LESB58]
 gi|254235393|ref|ZP_04928716.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254240822|ref|ZP_04934144.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296389201|ref|ZP_06878676.1| putative ABC export system, membrane fusion protein [Pseudomonas
           aeruginosa PAb1]
 gi|313110711|ref|ZP_07796573.1| hypothetical protein PA39016_002650001 [Pseudomonas aeruginosa
           39016]
 gi|60279989|gb|AAX16332.1| PA2389 [Pseudomonas aeruginosa]
 gi|60280007|gb|AAX16349.1| PA2389 [Pseudomonas aeruginosa]
 gi|115585551|gb|ABJ11566.1| putative ABC export system, membrane fusion protein [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126167324|gb|EAZ52835.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126194200|gb|EAZ58263.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218771861|emb|CAW27640.1| putative ABC export system, membrane fusion protein [Pseudomonas
           aeruginosa LESB58]
 gi|310883075|gb|EFQ41669.1| hypothetical protein PA39016_002650001 [Pseudomonas aeruginosa
           39016]
          Length = 391

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           ++R        +  + +  +I L  W                   IE SVS+ G +    
Sbjct: 1   MRRTRSTRRALLVAVCLSPLIALAAWQAYPFRSNSFDTVSVSRGSIESSVSALGTLQPRR 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ +  SG I+K  VE G  + +G  L+  +       +D  + SI+ L+  +  ++
Sbjct: 61  YV-DVGAQASGQIRKLHVEAGDDVTEGQLLVEIDPSTQQAKVDAGRYSIEMLKAQLAEQR 119

Query: 115 SA---LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +          +   L     +R E +     +  +T +++  +   I     SL+    
Sbjct: 120 AQYTLARQQYQRQQRLAAGGATRTEDVQSAQAQMLATQARIEMYQAQIRQAQASLRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 EL 181



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 75/236 (31%), Gaps = 30/236 (12%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++ + +    ++   L    ++++  L        E        +      +E  Q   
Sbjct: 108 IEMLKAQLAEQRAQYTLARQQYQRQQRLAAGGATRTEDVQSAQAQMLATQARIEMYQAQI 167

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIR 331
               + L   E       I +P++GT+V   +          Q  PL+  +       + 
Sbjct: 168 RQAQASLRSDEAELGYTRIYAPMSGTVVAVDAR-EGQTLNAQQQTPLILRIAKLSPMTVW 226

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY----- 386
           A+V+   I  VK G  A   F   +    +++   + +I P+  +  +            
Sbjct: 227 AQVSEADIGRVKPGMPAY--FTTLS-GEGRRWTGKVRQILPVPPKPLDQSNQGGGSPTSG 283

Query: 387 ------------YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                       Y V++ +      + + +L     A+V F A   T    +  P+
Sbjct: 284 SGGQSGSGRVVLYTVLVDVD-----NGDHQLMAEMTAQVFFVAA--TAENILTAPV 332


>gi|58040531|ref|YP_192495.1| putative secretion protein [Gluconobacter oxydans 621H]
 gi|58002945|gb|AAW61839.1| Putative secretion protein [Gluconobacter oxydans 621H]
          Length = 358

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 98/320 (30%), Gaps = 25/320 (7%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             F +   ++   + +  +  ++  + G    +         + + + +    +     L
Sbjct: 44  ADFTTVAPKVSGRIDRVRAEDNEYVHAGEELAHIEDDDYRAALGAAHGDTAAAQGDVDNL 103

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL- 247
           +ALL      +   K   + +  +     Q        +      I +Q+       E  
Sbjct: 104 QALLERQGSIVDAAKYTVQSDEAALVFARQNAARYRNLSAGGASTIEQQQGAEARQLEAV 163

Query: 248 ----YDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                D+A    A     +    LE+ Q       S     E      TI +P+ G +V 
Sbjct: 164 AALARDKAQTSTAEQQVAVLKAQLEKAQGALLKAQSAEHQAELNLSYCTIPAPVDG-VVG 222

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +      Y      L+ +VP  K   + A     Q+  V+ G +AT+    +       
Sbjct: 223 ERGVRVGAYVHPGTGLLAVVPVRKAYVL-ANFQETQLTKVQTGQSATIWVDTFPGH---P 278

Query: 363 FKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIEL----RNGFPAEVL 414
            KA ++ + P      +    +  T  + +V+ ++      D    L    R G   E  
Sbjct: 279 LKAHVDSLAPATGVAFAAIQPDNATGNFTKVVQRVPVKLTFDPGQPLAEKVRVGMSVEAR 338

Query: 415 FTAKNTTL------AQEIIH 428
               +T        A+ +  
Sbjct: 339 IDTSSTPEGIHSHDARYLWK 358



 Score = 43.1 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 86/297 (28%), Gaps = 25/297 (8%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            +    SG I + + E+   +  G  L   ED +    +          +  +D  ++ L
Sbjct: 48  TVAPKVSGRIDRVRAEDNEYVHAGEELAHIEDDDYRAALGAAHGDTAAAQGDVDNLQALL 107

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +   +  D  +   +S E  L+    + ++   +  + G +S     +    R       
Sbjct: 108 ERQGSIVDAAKYTVQSDEAALV--FARQNAARYRNLSAGGASTIEQQQGAEARQLEAVAA 165

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
               + ++S     ++  +  L   +    K   +++   +           +   + E+
Sbjct: 166 LARDKAQTSTAEQQVAVLKAQLEKAQGALLKAQSAEHQ-AELNLSYCTIPAPVDGVVGER 224

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT------REQKT 291
              +                    +  + ++ Q T        TI   T      +    
Sbjct: 225 GVRVGAYVHPGTGLLAVVPVRKAYVLANFQETQLTKVQTGQSATIWVDTFPGHPLKAHVD 284

Query: 292 ILSPIAGTIVYNQS--FSSSN---YAQ---------QSQPLMKIVPHSKLTYIRAKV 334
            L+P  G          ++ N     Q           QPL + V       + A++
Sbjct: 285 SLAPATGVAFAAIQPDNATGNFTKVVQRVPVKLTFDPGQPLAEKVRVG--MSVEARI 339


>gi|167628359|ref|YP_001678858.1| multidrug resistance efflux pump, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167591099|gb|ABZ82847.1| multidrug resistance efflux pump, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 217

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 63/185 (34%), Gaps = 13/185 (7%)

Query: 242 RHINELYDEANLEFANYLKEIS-RDLEQNQR-TFADEMSKLTILEKTREQKTILSPIAGT 299
             I+    +   E A  + EI  ++ +Q Q       + +     + R+   + +P  G 
Sbjct: 37  ARIDADIIKVGPEIAGRVMEIRVKEGDQVQAGETMVRLEEKNTTLQNRDAALVRAPGTGM 96

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           ++              Q L  ++   +  Y+ A++   +I  +  G   T+    +   +
Sbjct: 97  VIKKNVN-DGELVSPGQRLF-LLADFRNLYVSARIEETKIHRLAVGEPVTLTVDAFPGRK 154

Query: 360 EKKFKAIIEKI----DPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEV 413
               + ++E++    D + S   ++  +  + +V   + I      D  + +  G     
Sbjct: 155 ---LQGVVEQVGFAADSVFSLLPSSNVSGNFIKVTQRIPIKIKILDDQGLRILPGMNVIA 211

Query: 414 LFTAK 418
                
Sbjct: 212 KIATG 216



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 8/73 (10%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 22 LLSIIGIIGLITWSILLPIEIS-VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
          +   + ++  + ++    ++     ++ +   + +++++    +G + + +V+ G Q+  
Sbjct: 8  IAGAVLLLSALGYAGYSYVDSVRYVTTDDARIDADIIKVGPEIAGRVMEIRVKEGDQVQA 67

Query: 81 GTPLLTFEDIETT 93
          G  ++  E+  TT
Sbjct: 68 GETMVRLEEKNTT 80


>gi|150395961|ref|YP_001326428.1| secretion protein HlyD family protein [Sinorhizobium medicae
           WSM419]
 gi|150027476|gb|ABR59593.1| secretion protein HlyD family protein [Sinorhizobium medicae
           WSM419]
          Length = 355

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/414 (11%), Positives = 124/414 (29%), Gaps = 84/414 (20%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           + ++  +    + L++ +  + L+ ++  L P   SV ++        V  I    +G +
Sbjct: 1   MLKHFRSPSTLVVLVAGLAGLSLVLYAWRLPPFASSVETTENAYVRGYVTTISPQLAGYV 60

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V +  ++  G  L   +D        +    +   +  + T++             
Sbjct: 61  AEVPVRDYEEVKAGQLLARIDD-------RIFVQKLAQAKAMLATQR------------- 100

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                                              +L     +  S        E +   
Sbjct: 101 ----------------------------------AALANSFEQELSAKAGITASEAQLDG 126

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A L++ +     ++ L +K   +++D +Q      ++   +++ I   +   + +   
Sbjct: 127 AKAALATARATWDRIRPLADKGVATRSDADQARAAFQQAEAGVKQAIANLEVSRQSLATT 186

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                                 Q + +   + + + +   +   I++P AG +    +  
Sbjct: 187 LG---------------ARAGLQGSVSGAEAAVELAQIDLDNTRIVAPRAGRLGEIGAR- 230

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Y      L+ +VPH    +I A     Q+  ++ G   T+           + K  I
Sbjct: 231 VGQYVTAGTQLVSVVPHD--VWIVANFKETQLDGMRVGQPVTIWVDALKRQ---ELKGHI 285

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEV 413
           E+  P    +      +  T  + +V     ++I           L  G    V
Sbjct: 286 ERFSPAAGSEFSIIRPDNATGNFTKVAQRLGVRIAVDPEQPLAERLAPGLSVVV 339


>gi|33863250|ref|NP_894810.1| hypothetical protein PMT0979 [Prochlorococcus marinus str. MIT
           9313]
 gi|33640699|emb|CAE21154.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9313]
          Length = 432

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/425 (13%), Positives = 129/425 (30%), Gaps = 82/425 (19%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI---- 78
           + ++  IG   W+ L  I +SV  +G +L       I S  SG        NG+ I    
Sbjct: 1   MGLLIAIGGALWATLARIPLSVEGTGVLLPVS---TINSSISGT-------NGNAIWMFN 50

Query: 79  ---------------LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
                            G     F + + T+L      +I        +        N  
Sbjct: 51  QPKQQWHLSAKRFKNRPGQ----FNNRQMTELATNILNAIDKKHSEKISMAKNSSAENFT 106

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             + +  +  +       L    S   +  +  +  + R+L+  L +         ++ +
Sbjct: 107 EKLKQTFYGQKVPAGQLMLWIQSSAQHEQLHSELDQLKRTLRDTLAQQN-------NINS 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K S+LR  L+     L  M+ L  K  V++  + Q++  V     ++  N +E  N+   
Sbjct: 160 KQSILREELARRSSYLAQMQKLESKGYVTRAAILQEQAQVDNLRSQIYSNKNELINLSNQ 219

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +++ Y +     +N + +                 ++           ++ P  G     
Sbjct: 220 LDQSYQKLGNTLSNLINQ-----------------QMIFASDDVYLTQVI-PNNGE---- 257

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLT----YIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
                 +  Q  Q ++++            +   +  +++  V  G  A      Y    
Sbjct: 258 ------SVIQ-GQVVLQL--SDDSLNSPILVPVFLGSREMAQVFPGMDALATPEGYKRSE 308

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               +  +  +  + S  ++           + +  LA    N E         L  +  
Sbjct: 309 VGGIRGRVVSMAQVPSGLEDVH-------ARVGLKSLAQVITNREPSPTLAVLALERSGE 361

Query: 420 TTLAQ 424
           T+   
Sbjct: 362 TSPLN 366


>gi|125974266|ref|YP_001038176.1| RND family efflux transporter MFP subunit [Clostridium thermocellum
           ATCC 27405]
 gi|256003517|ref|ZP_05428507.1| efflux transporter, RND family, MFP subunit [Clostridium
           thermocellum DSM 2360]
 gi|281418319|ref|ZP_06249339.1| efflux transporter, RND family, MFP subunit [Clostridium
           thermocellum JW20]
 gi|125714491|gb|ABN52983.1| efflux transporter, RND family, MFP subunit [Clostridium
           thermocellum ATCC 27405]
 gi|255992541|gb|EEU02633.1| efflux transporter, RND family, MFP subunit [Clostridium
           thermocellum DSM 2360]
 gi|281409721|gb|EFB39979.1| efflux transporter, RND family, MFP subunit [Clostridium
           thermocellum JW20]
 gi|316941415|gb|ADU75449.1| efflux transporter, RND family, MFP subunit [Clostridium
           thermocellum DSM 1313]
          Length = 421

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 83/248 (33%), Gaps = 27/248 (10%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +       E+        LS  +K     K LFE  A+S+++L+  E  V  +   L   
Sbjct: 124 VDAEIKRAESAVKSAEQALSDAEKKYEDSKKLFEAQAISKSELDMAENAVRDARTALENA 183

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKTI 292
                            A +E  +  +++ ++ L     + +D   K+      + ++++
Sbjct: 184 TVAYN------------AAVESKDVDQKVKKENLNALILSISDLEKKI-----QKTKESM 226

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
             P  G +          Y    QP  +IV +     ++A V    I+ VK G    +  
Sbjct: 227 FCPFDGIVTEINI-QEGAYTSNMQPAFRIV-NLDKLKVKAMVNEYNIKDVKVGQKVRITG 284

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                  + +   ++E I P+          +   EV + I + A     + L+ G   +
Sbjct: 285 DAI--REDVEVFGVVESISPVAKTNMTASGEEVVIEVDISIDNTA-----LNLKPGLSVD 337

Query: 413 VLFTAKNT 420
                   
Sbjct: 338 CEILTDEK 345



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 53/354 (14%), Positives = 111/354 (31%), Gaps = 41/354 (11%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +KK  VE   ++ +G  L+ F+  +    ++  K++ K               ++ +   
Sbjct: 76  VKKLLVEKYQKVSKGQQLVEFDIEDMETELEKLKINKKVQELS-----QNSPTVDAEIKR 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            E A +S E+ L D   KY    SK      +     L M    +R     R  LEN + 
Sbjct: 131 AESAVKSAEQALSDAEKKYED--SKKLFEAQAISKSELDMAENAVRDA---RTALENATV 185

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLN-QQERIVYKSTLELRENIHEQKNMLRHIN 245
              A + S   D  + K       +S +DL  + ++            + E         
Sbjct: 186 AYNAAVESKDVDQKVKKENLNALILSISDLEKKIQKTKESMFCPFDGIVTEINIQEGAYT 245

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                A         ++   + +          K+ I      +              + 
Sbjct: 246 SNMQPAFRIVNLDKLKVKAMVNEYNIKDVKVGQKVRITGDAIRE------------DVEV 293

Query: 306 FSSSNYAQQSQPLMK--IVPHSKLTYIRAKVTPKQIQ-HVKKGYTATVRFPHYADIREKK 362
           F      +   P+ K  +    +   I   ++      ++K G +          + ++K
Sbjct: 294 F---GVVESISPVAKTNMTASGEEVVIEVDISIDNTALNLKPGLSVDCEI-----LTDEK 345

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL--RNGFPAEVL 414
              ++  +  + + +D N      Y +++          N++L   +   AEVL
Sbjct: 346 KDVVVVPMGVLKTDKDGNE-----YVLLVDKEKGVLMQRNVKLGIISDMTAEVL 394


>gi|219668152|ref|YP_002458587.1| secretion protein HlyD [Desulfitobacterium hafniense DCB-2]
 gi|219538412|gb|ACL20151.1| secretion protein HlyD family protein [Desulfitobacterium hafniense
           DCB-2]
          Length = 334

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/361 (11%), Positives = 110/361 (30%), Gaps = 69/361 (19%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
              +G+IG I  +        +  +G  + E  +    S  SG I +  VE G  +  G 
Sbjct: 10  FLFLGLIGFILTASGCSSPSGLVLTG--IAETGIYAHYSEVSGKISQLNVELGQSVKAGD 67

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L   +D      ++  + ++   +  +    +  D      +V ++       ++    
Sbjct: 68  ILAVLDDSNERYALEQLEQALARKQAVLAELTAGAD----PEEVKQRQNNVALAEIASAN 123

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            +     +K        +  +  +  + +  I       E   S     L + ++ L   
Sbjct: 124 AQLTQERTKKDYEDAQVLQEAGALAQSELDKIKYQANLAEAAVSTAAIQLDNARRQLA-- 181

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             L +K    Q  ++  +  +  + +++R+                              
Sbjct: 182 --LIQKG-TPQEKIDAAQADLALTEVQIRQT----------------------------- 209

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
                                +    + T+ +   GT++  +++   N       L+ I 
Sbjct: 210 ---------------------KDNLSKYTLHALQDGTVIS-RNYLPGNMISPGFNLVDIA 247

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
             ++   + A +  + +  +  G    +R        EK+++  +  ID        ++Q
Sbjct: 248 SETEKHLV-AYMPKESLPKLSHGQKVVIR------WGEKEYEGTVSFIDVKAQYTPKDMQ 300

Query: 383 T 383
           T
Sbjct: 301 T 301


>gi|299067345|emb|CBJ38542.1| Multidrug resistance protein A [Ralstonia solanacearum CMR15]
          Length = 428

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/295 (11%), Positives = 89/295 (30%), Gaps = 28/295 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + QL+                 +     +L   + ++R++Y N     +  ++  
Sbjct: 85  AIRADDTQLVAAGQPLIELDRADARVALEQAEAALAQTVRQVRTLYSNTGAYTSTLAMRE 144

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L+  ++DL   K +    AVSQ ++   +  +  +   +     + +       +   
Sbjct: 145 SDLAKAKEDLARRKQIAGTGAVSQEEIAHAQTSLQAAEAAVETAKEQLQANRVLTEQTTL 204

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +        ++                          + ++ + + G +   +S    
Sbjct: 205 ERHPNVLQAAAKVRE------------------AYLAYARTSLPASVTGYVAK-RSVQVG 245

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--------K 361
                  PLM IVP     ++ A     Q++H++ G    +    Y              
Sbjct: 246 QRVAPGTPLMAIVPLD-QLWVDANFKEVQVRHMRVGQPVELVADIYGSSVTYHGKVVGFS 304

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                   + P  +   N ++  +   V + +      D+ + +     A V   
Sbjct: 305 AGTGSAFSLLPAQNATGNWIKVVQRLPVRVSLDPKELKDHPLRVGLSMEARVDIH 359



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/182 (11%), Positives = 62/182 (34%), Gaps = 10/182 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT----DLIDLKKVSIKNLR 107
            + NVV++    +G +   + ++   +  G PL+  +  +              +++ +R
Sbjct: 68  VQGNVVQVTPQVAGTVVAIRADDTQLVAAGQPLIELDRADARVALEQAEAALAQTVRQVR 127

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFES-REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                  +    L  +   L KA E     + +   G             + +   +++ 
Sbjct: 128 TLYSNTGAYTSTLAMRESDLAKAKEDLARRKQIAGTGAVSQEEIAHAQTSLQAAEAAVET 187

Query: 167 KLTRMRS--IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
              ++++  +   +  LE   ++L+A     +  L   +          V++  +   +R
Sbjct: 188 AKEQLQANRVLTEQTTLERHPNVLQAAAKVREAYLAYARTSLPASVTGYVAKRSVQVGQR 247

Query: 222 IV 223
           + 
Sbjct: 248 VA 249


>gi|258517219|ref|YP_003193441.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257780924|gb|ACV64818.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 397

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 84/264 (31%), Gaps = 40/264 (15%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                 ++  R   +   +   ++  +     L + + D    K L+E+ AVSQ    Q 
Sbjct: 102 QQAEANLEKARQSDLITMKNQAQSNLATTETTLKNAEADYNRAKALYEQKAVSQQSFEQT 161

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           ++       EL E+ +          E     N    N +K     L Q +  ++     
Sbjct: 162 QKAY-----ELAESAYNLAKQNLDTIE-----NGTIPNTIKVSEAALAQARANYS----- 206

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                       I +PI+G I               +PL+ IV  +K+  +   ++   +
Sbjct: 207 ---------NMIITAPISGVITAKNVN-IGEKTPTDKPLVSIVNLNKVVVV-TNISENIV 255

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +K G    V     +D   K F+  I  I                Y + ++I +    
Sbjct: 256 NKIKVGQKIPVLLQAVSD---KPFQGEITNISYAADTATKA------YPIKIQIDNPE-- 304

Query: 400 DNNIELRNGFPAEVLFTAKNTTLA 423
               +L+ G  AEV       +  
Sbjct: 305 ---HKLKPGMFAEVKLEGNKESFL 325



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 57/169 (33%), Gaps = 2/169 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           ++   ++ S + SG++    +   +    +G + K  V+ GS++  G  L   +  E   
Sbjct: 41  AVRGQLDDSTTVSGKLEALASADVV-PKVAGKVNKIPVDIGSEVHAGDLLAALDAPELLA 99

Query: 95  LIDLKKVSIKNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +   + +++  R   + T K+         +   K  E+   +      +   +     
Sbjct: 100 AVQQAEANLEKARQSDLITMKNQAQSNLATTETTLKNAEADYNRAKALYEQKAVSQQSFE 159

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
               +         L +     +    + N   +  A L+  + + + M
Sbjct: 160 QTQKAYELAESAYNLAKQNLDTIENGTIPNTIKVSEAALAQARANYSNM 208


>gi|124010393|ref|ZP_01695037.1| RND efflux system membrane fusion protein [Microscilla marina ATCC
           23134]
 gi|123983515|gb|EAY23986.1| RND efflux system membrane fusion protein [Microscilla marina ATCC
           23134]
          Length = 361

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 67/213 (31%), Gaps = 18/213 (8%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLK 260
           + +     ++  D          +   LR    +++N     N L    E N    +  +
Sbjct: 77  QQVKAGQLIASVDAADYVLQYEDAKASLRNVEAQRQNAQSSYNRLRQLYENNNASLSDYE 136

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           +     E  + T      K+ + +       I++P  G +      ++ N     +P+++
Sbjct: 137 KAKTGYESAKATVNSIKKKIALAQSQINYTKIVAPRDGVVAEVLVETNENV-SPGRPIVQ 195

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +    K   ++  +    I  VK G T  +RF        K     +             
Sbjct: 196 L-DSGKELEVKVDIPEVFIAKVKSGDTVQMRFSAQPQTLYKGIVHEV---------AFTA 245

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            + +  Y V +KI      + +  +R      V
Sbjct: 246 SRGKTTYPVTVKI-----LNPDQNMRPSMTCNV 273



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 31/74 (41%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I+   V+ G Q+  G  + + +  +     +  K S++N+       +S+ + L   
Sbjct: 65  SGTIQVLNVKVGQQVKAGQLIASVDAADYVLQYEDAKASLRNVEAQRQNAQSSYNRLRQL 124

Query: 124 YDVLEKAFESREEQ 137
           Y+    +    E+ 
Sbjct: 125 YENNNASLSDYEKA 138


>gi|269962257|ref|ZP_06176610.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833088|gb|EEZ87194.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 379

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 74/256 (28%), Gaps = 24/256 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              ++E + ++          + F   ++     L+       +   +    + + +   
Sbjct: 77  EIPAKESEAVEAGALLARIDPRQFEIAVALKQAELETATQEAGASSADVARAQAQLARAL 136

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L +          L  K  + +   ++    +  +   +     E +   RH+ +   
Sbjct: 137 ADLENINIQSARWFELERKKLIPKARADEARATLSDAESAVNVAKAELERARRHLGQEGL 196

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E                          +S L   E       + +P  G +V     ++ 
Sbjct: 197 EN-------------------PRIKAALSNLASAELDLSFTELRAPARGGVVNLTV-AAG 236

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
             AQ  + LM  V      ++ A +T   + HVKKG    V          + FK  IE 
Sbjct: 237 AQAQTGKTLMTFV-DGGNIWVEAYMTENNLGHVKKGDPVDVVL---DTHPGQVFKGHIEN 292

Query: 370 IDPIISQQDNNLQTQE 385
           +   +  +        
Sbjct: 293 VVSAVYHESLGADGLP 308



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/192 (9%), Positives = 56/192 (29%), Gaps = 11/192 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +K +T +++I  +  +    + P   +      +        I    SG + +   + 
Sbjct: 29  KFIKIITAIALILFVWYVAADRVTPFTSNARVKAIVTP------IIPRVSGTVIEIPAKE 82

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              +  G  L   +  +         V++K       T+++     +      + A    
Sbjct: 83  SEAVEAGALLARIDPRQF-----EIAVALKQAELETATQEAGASSADVARAQAQLARALA 137

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + + ++          +      +    +         ++ + + +LE     L      
Sbjct: 138 DLENINIQSARWFELERKKLIPKARADEARATLSDAESAVNVAKAELERARRHLGQEGLE 197

Query: 195 HQKDLTMMKNLF 206
           + +    + NL 
Sbjct: 198 NPRIKAALSNLA 209


>gi|265984127|ref|ZP_06096862.1| HlyD family protein secretion protein [Brucella sp. 83/13]
 gi|264662719|gb|EEZ32980.1| HlyD family protein secretion protein [Brucella sp. 83/13]
          Length = 388

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 109 LFEIDPQPFQIELDQAKANLAQASEKLAGLALTYKQQLASVAQAKDDVTFAQEQFDRVSA 168

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 169 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 224

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 225 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFFAVGDPAFTLI-- 271

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 272 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITP 316



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 73/241 (30%), Gaps = 24/241 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIK 60
           ++    HP   + + +   +  I +  W             G+ ++ED+       V I 
Sbjct: 34  QDQSPKHPMLRRILFIAGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAIT 85

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG + +  V+    + +G  L   +       +D  K ++      +     AL + 
Sbjct: 86  PQVSGQVIRVAVDPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKLAGL--ALTYK 143

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                V +   +    Q  +   +  +     F            +++ +          
Sbjct: 144 QQLASVAQAKDDVTFAQ--EQFDRVSALVHDKFEARAQFDQAERALQVAKQEQNAAASAA 201

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
               + L   L    Q+  +    L  K   ++ +L ++   + +        + + +N+
Sbjct: 202 AATLAQLGGTLDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPFAGTVTQVENI 255

Query: 241 L 241
            
Sbjct: 256 Q 256


>gi|255525893|ref|ZP_05392820.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|255510387|gb|EET86700.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
          Length = 418

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 58/420 (13%), Positives = 131/420 (31%), Gaps = 105/420 (25%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISV-------SSSGEILNE---------DNVVEIK 60
           +    +L +IG + +   S     +  V        + G I  E            V + 
Sbjct: 15  VGVALILVVIGCVSIFGKSKKAEGKQDVKNVKVEKVAVGSISTELEYASKLNPTQEVTVL 74

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
               G +    V+ G ++  G  L T +  +    +  ++ ++                 
Sbjct: 75  PKAGGKVASVNVDIGDKVTAGQVLFTLDAAQLQAQLQSQQAALA---------------- 118

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                                     ++ + +     S + + +      ++   +   D
Sbjct: 119 --------------------------ASNANLAKTSDSGLQQQITAAEQSLQKSQIAYND 152

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            +N              +   M+ L+   A+++ D++  +      + +L+     Q N+
Sbjct: 153 AQN--------------NYDKMQKLYASGAIAKQDVDNAKVKYDNCSADLK---AAQDNL 195

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              + +   ++    A  + +    +   Q    D               +I SPI G +
Sbjct: 196 NLIVQKSGPQSTQAAAAQVAQSQAGVNAAQIQLND--------------ASITSPING-V 240

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V  +       A      + I+  S        V  K +  ++ G +  V      +   
Sbjct: 241 VSAKDVKVGQIAGGQSGSVTII-DSSSFTAEISVPDKVVGKIQIGQSVQVSVSALEN--- 296

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           KK   +I+KI P  S +DN+      Y V +K++     ++  EL+ G  A+V   ++  
Sbjct: 297 KKVTGVIDKISPNSSSKDNS------YTVKVKVS-----NSTGELKAGMFAKVSLPSEKK 345


>gi|152994139|ref|YP_001338974.1| secretion protein HlyD family protein [Marinomonas sp. MWYL1]
 gi|150835063|gb|ABR69039.1| secretion protein HlyD family protein [Marinomonas sp. MWYL1]
          Length = 354

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 83/264 (31%), Gaps = 27/264 (10%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +S +  +N +     +    +E + +       S  +  F    +     L+     +  
Sbjct: 54  QSDITTINAEVSGAIQTIAIKENEKVSKGQLLFSIDATPFKVAEAKAQAQLQQVRLNILE 113

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 + + + +      + +Q++     NL ++  +S    +Q  +    S L+    
Sbjct: 114 QKAAYEEKKAEINQAENEFAFNQREEKRQANLLKQKFISDTQFDQARQAAEVSELK---- 169

Query: 234 IHEQKNMLRHINELYD---EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +   K  L  + E       A LE     +     L+Q +                    
Sbjct: 170 VATLKKDLFRLKEALGGDPSAPLEDHPSYQAAQAALDQTRIDLG--------------HV 215

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P +G +   +  +S  Y       M +V   +  +I A  T K + +V+ G    +
Sbjct: 216 NVRAPASGVV--AKVPNSGEYVTAGSTTMVLV-SDERQWIAANFTEKDLTYVQPGQEVEI 272

Query: 351 RFPHYADIREKKFKAIIEKIDPII 374
               Y  +        +E I P  
Sbjct: 273 EVDAYPGV---SLHGKVESISPAT 293



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 51/132 (38%), Gaps = 2/132 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + ++  I +  SG I+   ++   ++ +G  L + +           +  ++ +R +I 
Sbjct: 53  VQSDITTINAEVSGAIQTIAIKENEKVSKGQLLFSIDATPFKVAEAKAQAQLQQVRLNIL 112

Query: 112 TEKSALDFLNNKYDVLEK--AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            +K+A +    + +  E   AF  REE+    L K        F+    +   S     T
Sbjct: 113 EQKAAYEEKKAEINQAENEFAFNQREEKRQANLLKQKFISDTQFDQARQAAEVSELKVAT 172

Query: 170 RMRSIYLNRLDL 181
             + ++  +  L
Sbjct: 173 LKKDLFRLKEAL 184


>gi|295691263|ref|YP_003594956.1| HlyD family protein [Caulobacter segnis ATCC 21756]
 gi|295433166|gb|ADG12338.1| secretion protein HlyD family protein [Caulobacter segnis ATCC
           21756]
          Length = 933

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/329 (12%), Positives = 92/329 (27%), Gaps = 29/329 (8%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            +++     +R  +      L          +     + + L     + ++         
Sbjct: 620 SVQRTDNAYVRGQVTVVAPQLSGYVVGVAAQDFQTVRKGQPLFTIDQRIYAQRVDQARAT 679

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +++    L        S        E      +A +   + D+  + +L    +VS    
Sbjct: 680 LAAREADLANSAQAQASREAALKSREADIGSAQAQVERARADMARVADLATDGSVSL--- 736

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             +ER   ++ L   E         R I              ++ +    E  +   A  
Sbjct: 737 --RERDQARAALRAAEATLASAKAGREIA----------RQDIRSVGVSREGLEAAVAAA 784

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + L + E       + +P  G +          +      L+ +VP  +     A    
Sbjct: 785 KAALRLAEIDLSNTIVTAPADGQLGQVGVRH-GQWVTAGTQLVSLVPPQRWVI--ANFKE 841

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILK 392
           +Q   ++ G  A+V      D R   F   +E++ P    +         T  + ++  +
Sbjct: 842 RQSGRMRPGQPASVTVDALGDQR---FTGRVEQVSPATGSEFSILPPQNATGNFTKIAQR 898

Query: 393 ITDLAFSDNN----IELRNGFPAEVLFTA 417
           +      D        LR G   +     
Sbjct: 899 LPVRIVLDAGQADLARLRPGMSVQAEVDT 927



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 58/188 (30%), Gaps = 10/188 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A     T+   + ++ L  W  L P   SV  +        V  +    SG +     ++
Sbjct: 593 AIFITATVTLAVILLILFLW-KLPPFGGSVQRTDNAYVRGQVTVVAPQLSGYVVGVAAQD 651

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G PL T +         +    +   R  +   ++ L          E A +SR
Sbjct: 652 FQTVRKGQPLFTIDQ-------RIYAQRVDQARATLAAREADLANSAQAQASREAALKSR 704

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E  +     +     + +    ++ +     + L             E   +  +A    
Sbjct: 705 EADIGSAQAQVERARADM--ARVADLATDGSVSLRERDQARAALRAAEATLASAKAGREI 762

Query: 195 HQKDLTMM 202
            ++D+  +
Sbjct: 763 ARQDIRSV 770


>gi|307611809|emb|CBX01522.1| hypothetical protein LPW_32091 [Legionella pneumophila 130b]
          Length = 381

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 77/239 (32%), Gaps = 31/239 (12%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +   S  +      + L+    +S+N+   ++  +  + + L +   +   ML  +++  
Sbjct: 107 KDSYSIAKAKFVGTEELWNAGLISKNNYLSEKSGLDTARVTLMQATRKLSEMLEKMDDKN 166

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY------ 302
            +     +                 AD      IL        + +P  G ++Y      
Sbjct: 167 TQNISNLS----------------LADFDKVRKILTSNHNLIHLKAPSDGIMLYPPKSGE 210

Query: 303 --NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
             N   +  +  +  Q +  I    K   +   V    I  ++ G  AT+    +   + 
Sbjct: 211 DKNNRVTVGSTIKSGQVIALIG-DLKGISVEIDVPEIDIDKIRPGMEATISGVAFGRHK- 268

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              K  +  ++   S  + +      +  ++++  L     +  ++ G  A +    ++
Sbjct: 269 --LKGKLVAVNAQAS--NTSTGGLPSFTAVVEVNSLTPEQQSW-IKVGMSASIELNVES 322


>gi|295701188|ref|YP_003610189.1| efflux transporter RND family, MFP subunit [Burkholderia sp.
           CCGE1002]
 gi|295441511|gb|ADG20678.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
           CCGE1002]
          Length = 383

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 64/191 (33%), Gaps = 20/191 (10%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT---R 287
           R +  +  ++    +      N + A Y  +      Q     AD  SK   +E+     
Sbjct: 109 RSDRAQLASLRAAADLSQTVYNRDTAQYDIQAIA-RAQVDADAADLRSKRAQVEQQAALV 167

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           E+KTI +P AG +    + +   Y      ++ +       Y+   +  +++  ++ G +
Sbjct: 168 EKKTIRAPFAGRV-GITTVNPGQYVNPGDAIVTLQAID-PIYVDFHLPQQELGQLQVGQS 225

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             V    +       F   I  I+P +     N++            + A  +   +L  
Sbjct: 226 VAVNTSAFVSR---GFVGKIRAINPRLDSTTRNVEV-----------EAALDNREGKLLP 271

Query: 408 GFPAEVLFTAK 418
           G  A V     
Sbjct: 272 GMYASVKVDVG 282



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/252 (10%), Positives = 79/252 (31%), Gaps = 24/252 (9%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++++   ++G ++  G  L+   D          +  + +LR   D  ++  +    +Y
Sbjct: 84  GLVREIAFKSGEEVKAGQVLVRLND-------RSDRAQLASLRAAADLSQTVYNRDTAQY 136

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D+   A    +    D   K                 ++  ++   +R+ +  R+ +   
Sbjct: 137 DIQAIARAQVDADAADLRSK-----------RAQVEQQAALVEKKTIRAPFAGRVGITTV 185

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +             L  +  ++    + Q +L Q +      ++ +  +    +  +  I
Sbjct: 186 NPGQYVNPGDAIVTLQAIDPIYVDFHLPQQELGQLQ---VGQSVAVNTSAFVSRGFVGKI 242

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             +    +    N   E+   L+  +      M     ++   EQ+ +  P         
Sbjct: 243 RAINPRLDSTTRNV--EVEAALDNREGKLLPGMYASVKVDVGHEQRYLTLPQTAITYNPY 300

Query: 305 SFSSSNYAQQSQ 316
             +     +  +
Sbjct: 301 GATV-FVIKPGE 311


>gi|212711689|ref|ZP_03319817.1| hypothetical protein PROVALCAL_02764 [Providencia alcalifaciens DSM
           30120]
 gi|212685791|gb|EEB45319.1| hypothetical protein PROVALCAL_02764 [Providencia alcalifaciens DSM
           30120]
          Length = 390

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/375 (12%), Positives = 102/375 (27%), Gaps = 93/375 (24%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                + I +  +G + +   EN   +  G  L+  +                     + 
Sbjct: 57  VSGLQIPIVAQTTGNVTQVNFENTDLVKAGDVLVVLDKTN----------------AQLA 100

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E++  D                                             L   + + 
Sbjct: 101 YEQAKHD---------------------------------------------LASTVRKT 115

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           + +Y+N    + +    R  L+  QKD      L     +S+ DL   +  V  +   L 
Sbjct: 116 KELYINGDQYQAQIQQNRVSLAQAQKDYQRRAALGRSGTISKEDLQHSQEAVQLAQAALD 175

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +I +       +     +                  NQ         +       ++  
Sbjct: 176 ISIQQYNANRALLRNTALK------------------NQPAVQQAADSVRSAWINLQRTE 217

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP+ G +   ++    +       LM IVP  +  ++ A     Q+++V+ G   T+ 
Sbjct: 218 IKSPMTGYVSR-RNVQVGSQVSSQSSLMAIVPV-QPVWVDANFKETQLENVRIGQPVTIN 275

Query: 352 FPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDN 401
              Y       +K  +  +D          P  +   N ++  +   V +++     +  
Sbjct: 276 SDFYGSNV--SYKGTVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRVELDPEQVAKY 333

Query: 402 NIELRNGFPAEVLFT 416
            + +       +   
Sbjct: 334 PLRIGLSMNVTIDIK 348


>gi|77917980|ref|YP_355795.1| membrane-fusion protein [Pelobacter carbinolicus DSM 2380]
 gi|77544063|gb|ABA87625.1| membrane-fusion protein [Pelobacter carbinolicus DSM 2380]
          Length = 394

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 62/205 (30%), Gaps = 21/205 (10%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +N +++ E     +    R+ + E +      N+   +          E    L      
Sbjct: 106 KNAVDEAEANQMGAEALYRQALSEYRR-----NQPLHQQGHLSDQEFLEYRTALATTGAD 160

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHS-KLTY 329
                + L        +  ILSPI GT++  +          S   P + I+        
Sbjct: 161 LQSSKATLAKARTNLRKARILSPIDGTVIE-REIEVGQTVAASYSTPTLFILAEDLARME 219

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I A V    I  ++KG         Y D +   F   + +I    +++ N +        
Sbjct: 220 IEADVDESDIGLIRKGQKVRFTVQAYPDRQ---FHGEVTQIRLNPTEESNVVTYTV---- 272

Query: 390 ILKITDLAFSDNNIELRNGFPAEVL 414
                  A +D  + L  G  A   
Sbjct: 273 ----VVAALNDGGL-LLPGMTATAD 292



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/307 (11%), Positives = 89/307 (28%), Gaps = 43/307 (14%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS--- 102
           + G +     V       SG I K  V+   ++ +G  L   +     + +D  + +   
Sbjct: 66  AVGTVEVGTEV-------SGTIGKVLVDYNDRVRKGQVLAELDLELFKNAVDEAEANQMG 118

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            + L     +E      L+ +  + ++ F      L        S+ + +     +    
Sbjct: 119 AEALYRQALSEYRRNQPLHQQGHLSDQEFLEYRTALATTGADLQSSKATLAKARTNLRKA 178

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK----------NLFEKNA-- 210
            +   +          +     +S     L    +DL  M+           L  K    
Sbjct: 179 RILSPIDGTVIEREIEVGQTVAASYSTPTLFILAEDLARMEIEADVDESDIGLIRKGQKV 238

Query: 211 ---------------VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                          V+Q  LN  E     +   +   +++   +L  +    D      
Sbjct: 239 RFTVQAYPDRQFHGEVTQIRLNPTEESNVVTYTVVVAALNDGGLLLPGMTATADFIVDVE 298

Query: 256 ANYLKEISRDLE-QNQRTFADEMSKLTILEK--TREQKTILSPIAGTIVYNQSF---SSS 309
            + L   +  L+   +R  + + + + +LE      +  ++S ++  +         +  
Sbjct: 299 DDALLVPNAALQFAARRHPSAKDAAVLVLEDGGRLRRLAVVSGLSDGVQTTVLTEGLTEG 358

Query: 310 NYAQQSQ 316
                 +
Sbjct: 359 MVVATGE 365


>gi|289664004|ref|ZP_06485585.1| multidrug resistance efflux pump [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 362

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 91/305 (29%), Gaps = 29/305 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V + A   R + L    G+ ++   +     + +   +L     +  S      +  
Sbjct: 76  EVPVQDFAHVKRGQLLAKIDGRIYAQQLEQAKAQVQTAQANLANWEQQRHSAEATIAEQR 135

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  +A     +      + L  +  VS+ D               R+     +    
Sbjct: 136 AALSSNQAQRDRTRSAYARTQQLASQQLVSEQD---------------RDTAFAARAQAD 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                   A        + ++ +    +   A+  + + + +   +   IL+P  G +  
Sbjct: 181 AGVAQARAAVQAAEENARSVTVNRAALEAAVANAQAAVQLAQINLDNTRILAPRDGQLGQ 240

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP  +  +I A     Q+  ++ G  A+       + R   
Sbjct: 241 LGVR-QGAYVTNGTQLMSLVP--ETLWIVANFKETQMAKIRTGQRASFTVDALDNAR--- 294

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVL 414
               +++I P    +      +  T  + ++  +I      D N      LR G    V 
Sbjct: 295 LHGRVQEISPAAGSEFSVLPADNATGNFVKIAQRIPLRISVDPNQPLAPRLRPGMSVVVA 354

Query: 415 FTAKN 419
               +
Sbjct: 355 VDTDS 359



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 53/169 (31%), Gaps = 11/169 (6%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSI-----------LLPIEISVSSSGEILNE 53
           M      + PAS +R     I G+IG    ++           L P   ++  +   L  
Sbjct: 1   MNTPADSSPPASQQRRRRRRIAGVIGFGGLALIGVALVLYAWRLPPFVSAIERTENALVH 60

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             +  I    SG + +  V++ + + +G  L   +       ++  K  ++  + ++   
Sbjct: 61  GQITVIAPQVSGYVTEVPVQDFAHVKRGQLLAKIDGRIYAQQLEQAKAQVQTAQANLANW 120

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +               A  S + Q       Y  T        +S   R
Sbjct: 121 EQQRHSAEATIAEQRAALSSNQAQRDRTRSAYARTQQLASQQLVSEQDR 169


>gi|260461158|ref|ZP_05809407.1| secretion protein HlyD family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259033192|gb|EEW34454.1| secretion protein HlyD family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 433

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/359 (12%), Positives = 98/359 (27%), Gaps = 81/359 (22%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +++  V     + +G  L           +   +  +  +R  + T +++       
Sbjct: 132 SGTVQEIDVHENQTVKKGDVLYRLRPASFETALAAAQAQLGTVRNQVLTLQASY------ 185

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                              S+    +  +    S +  + DL  
Sbjct: 186 -------------------------------QQSLSLIEQAQADIPYYESAFQRQQDLLK 214

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
            S+  +A   S Q DL   +                   V  +  + +  + +       
Sbjct: 215 TSTASKASFDSAQHDLVAARQ-----------------KVSVAKAQAQATLAQLGGDANQ 257

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                    +E   +  +    ++  QR  AD                + +P  G +   
Sbjct: 258 --------PVEKNPFYLQAQSGVDDAQRNLAD--------------SVVKAPFDGVVTNV 295

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKK 362
            +     Y   SQP   ++  +   +I A+    ++ +V+ G TAT+    Y       +
Sbjct: 296 DALQVGKYLPASQPAFSLISQTD-LWIEAEPKETELTYVRPGQTATISVDTYPGAVWHGR 354

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAK 418
             +I        S       T  + +V+ +I     +        LR G    V     
Sbjct: 355 VASISPASSSSFSLLPAQNTTGNWVKVVQRIPMRVTVDDPQGKPPLRGGMSVVVGIDTG 413


>gi|182677194|ref|YP_001831340.1| multidrug resistance protein MdtN [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182633077|gb|ACB93851.1| secretion protein HlyD family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 362

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 101/355 (28%), Gaps = 81/355 (22%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L R+ +L++IG    + W      +     S +   +  VV + +   G +    V    
Sbjct: 12  LIRIIVLAVIGYGLFLAWQAYRQ-DRDFPYSDDASLDAEVVHVAASVGGRLLNLPVHENQ 70

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G  L   + +                   +  E++  D      D+ + A  +R  
Sbjct: 71  AVRAGDLLFELDPVPY----------------RLAVEQAKADL-----DLAKAALATRRR 109

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +       +                                   + +++  +       
Sbjct: 110 VITTETAAANIA---------------------------------KEQTTRAKTNYELAV 136

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +    +  L  KN V +   +  E +   +   L +   ++   +  I +   E     A
Sbjct: 137 RTAERLAPLAAKNFVPKQQYDNAEVVRRDAATSLSQAQRQEAAAIAAIGDTSGEEAAIRA 196

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                  L I E+  E   + +P AG I   +  ++  +   +Q
Sbjct: 197 REAA-------------------LAIAERALENTIMRAPHAGRIAGLKV-TTGEFIAPAQ 236

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKI 370
            L  ++   +   I A     Q+  +K G         Y+ I R K     ++ I
Sbjct: 237 SLFTLITTDEWFLI-ANFRESQLPVIKVGDCV----TGYSMIDRTKPLHGRVQGI 286


>gi|170751621|ref|YP_001757881.1| secretion protein HlyD family protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658143|gb|ACB27198.1| secretion protein HlyD family protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 333

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/318 (8%), Positives = 89/318 (27%), Gaps = 69/318 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + N+V +    +G +    V +   + +G PL   +  +     +  +  +      +  
Sbjct: 29  DGNIVNVAPQVAGQVIALDVTDNQFVRKGDPLFRIDPRQFRFSREQAQGQLDASNAQVAN 88

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           +K  ++     +    +  ++  +     L    +   +          RSL    T  +
Sbjct: 89  QKLGVEIARKNFPAALQLAQANLDSAKANLALQQANYDR---------QRSLPKLATTQQ 139

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +     + +   + +    +   + +                              +++
Sbjct: 140 DVDTTAANYQQAKAQVEQAQARLVQAMP-----------------------------VQQ 170

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           NI + +  +  +    ++A  +                             +   E   +
Sbjct: 171 NIGQSEQQVDQLKGQAEQAKAQVEQ-------------------------ADLNIEWSVV 205

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +   G +      +  +Y    Q +M +V      ++ A     ++  ++ G    +  
Sbjct: 206 RASQDGWVTKRNVNA-GDYLSAGQQVMSLVTTD--VWVTANYKETELDGMRPGQRVKIAI 262

Query: 353 PHYADIREKKFKAIIEKI 370
             Y D+     +  ++ I
Sbjct: 263 DAYPDL---DLEGHVDSI 277


>gi|149187477|ref|ZP_01865775.1| multidrug resistance efflux pump [Vibrio shilonii AK1]
 gi|148839013|gb|EDL55952.1| multidrug resistance efflux pump [Vibrio shilonii AK1]
          Length = 341

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 68/223 (30%), Gaps = 24/223 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + +   +     + ++ + +         +        RA LS  Q +     +L  + 
Sbjct: 86  QRPYLLAVKQAKAAYQLAVQQHDVADKQVTEAVAGLDAARANLSEAQIEYKRTDSLVTRK 145

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             S  DL+  +  +  +   L +     +  + +  E   EA +      +    +L   
Sbjct: 146 LASPQDLDTAKNKLANAQASLEQARANVEKAIANRGEQGLEAAIVQQAAAQLAQAELN-- 203

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                                 I SP+ G      +          Q L  ++      +
Sbjct: 204 -----------------LSYTDITSPVDGLSGEVSAH-VGTVVSVGQTLFPVI-IDNSYW 244

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +RA      + H+K G  A ++   Y D+    + A IE + P
Sbjct: 245 VRANFKETDLTHLKPGQKAEIKIDMYPDL---VWNATIESLSP 284



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 57/187 (30%), Gaps = 26/187 (13%)

Query: 18  KRMTLLSIIGIIGLITWSIL------LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           K + LL    + G + WS +         +  V +   +     V        G +   +
Sbjct: 17  KILFLLVCAAVFGALYWSWIYADSHPSTEDAYVRAK-ILSVAPQVQ-------GQVVSVE 68

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V +  +I +G  LL  +            +++K  +          D  + +        
Sbjct: 69  VADFQRINKGDLLLRIDQ-------RPYLLAVKQAKAAYQLAVQQHDVADKQVTEAVAGL 121

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           ++    L +   +Y  T S V          S +   T    +   +  LE   + +   
Sbjct: 122 DAARANLSEAQIEYKRTDSLVTRK-----LASPQDLDTAKNKLANAQASLEQARANVEKA 176

Query: 192 LSSHQKD 198
           +++  + 
Sbjct: 177 IANRGEQ 183


>gi|152983776|ref|YP_001348231.1| hypothetical protein PSPA7_2871 [Pseudomonas aeruginosa PA7]
 gi|150958934|gb|ABR80959.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 391

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           ++R        +  + +  +I L  W                   IE SVS+ G +    
Sbjct: 1   MRRTRSTRRALLVAVCLSPLIALAAWQAYPFRSTSFDTVSVSRGSIESSVSALGTLQPRR 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ +  SG I+K  VE G  + +G  L+  +       +D  + SI+ L+  +  ++
Sbjct: 61  YV-DVGAQASGQIRKLHVEAGDDVTEGQLLVEIDPSTQQAKVDAGRYSIEMLKAQLAEQR 119

Query: 115 SA---LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +          +   L     +R E +     +  +T +++  +   I     SL+    
Sbjct: 120 AQYTLARQQYQRQQRLAAGGATRTEDVQSAQAQMLATQARIDMYQAQIRQAQASLRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 EL 181



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 75/236 (31%), Gaps = 30/236 (12%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++ + +    ++   L    ++++  L        E        +      ++  Q   
Sbjct: 108 IEMLKAQLAEQRAQYTLARQQYQRQQRLAAGGATRTEDVQSAQAQMLATQARIDMYQAQI 167

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIR 331
               + L   E       I +P++GT+V   +          Q  PL+  +       + 
Sbjct: 168 RQAQASLRSDEAELGYTRIYAPMSGTVVAVDAR-EGQTLNAQQQTPLILRIARLSPMTVW 226

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY----- 386
           A+V+   I  VK G  A   F   +    +++   + +I P+  +  +            
Sbjct: 227 AQVSEADIGRVKPGMPAY--FTTLS-GEGRRWTGKVRQILPVPPKPLDQSNQGGGSPTSG 283

Query: 387 ------------YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                       Y V++ +      + + +L     A+V F A   T    +  P+
Sbjct: 284 SGGQSGSGRVVLYTVLVDVD-----NGDHQLMAEMTAQVFFVAA--TAENILTAPV 332


>gi|327537587|gb|EGF24301.1| membrane-fusion protein [Rhodopirellula baltica WH47]
          Length = 483

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 79/199 (39%), Gaps = 17/199 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + +       L+ R    E +++L  I+E   + ++  A+     S  L   +R     +
Sbjct: 276 RVKAGQTLLQLDGRPLRIELESLLAEIDEAQKDEDIALASNQI-ASAQLAGLRRKT--LL 332

Query: 278 SKLTILEKTREQKTILSPIAG-TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            K  +L+    +  ++SPI G  I  + + S     +  Q LM++ P      I  ++  
Sbjct: 333 RKAELLQDKLSKLDVVSPIDGIIIQGDLTRSLGTPLEIGQTLMEVAPEGN-VEIELELPE 391

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
            +I  V+      + FP       + F++ ++ + P  + +D++        V + I + 
Sbjct: 392 SEIGFVEMNAPVELWFPALD---GEAFESSVQSVWPAATIRDDSN-------VFVAIAE- 440

Query: 397 AFSDNNIELRNGFPAEVLF 415
              + N  LR G   E + 
Sbjct: 441 -LPNENAALRVGMRGEAIV 458



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 17/155 (10%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W  L         R  L+ I  ++ LI   I  P+     +   +   +    I SP   
Sbjct: 208 WGRLANKLSKWWSRRGLIGIAFLVTLILTCI--PMSYRTHAIATVAPMNGR-LIASPIDA 264

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +    V  G ++  G  LL  +               + LR  +++  + +D      D
Sbjct: 265 TLLTTLVRPGDRVKAGQTLLQLDG--------------RPLRIELESLLAEIDEAQKDED 310

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +   + +    QL     K     +++    +S +
Sbjct: 311 IALASNQIASAQLAGLRRKTLLRKAELLQDKLSKL 345


>gi|323697494|ref|ZP_08109406.1| secretion protein HlyD family protein [Desulfovibrio sp. ND132]
 gi|323457426|gb|EGB13291.1| secretion protein HlyD family protein [Desulfovibrio desulfuricans
           ND132]
          Length = 340

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 65/403 (16%), Positives = 118/403 (29%), Gaps = 93/403 (23%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP----FSGIIKKFQVENG 75
           + + +++ + G   W+           +GE++   NV   +          I+   VE G
Sbjct: 6   IIIAALVLLGGGGYWAYRTYCGECAE-TGELVLYGNVDIRQVNLAFKDGERIQDVLVEEG 64

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +G  L                   + L   I + K+ +D  N     LE      E
Sbjct: 65  DVVAKGQELARL--------------QTRRLEAEIASLKAGVDAQNFVVLQLENGSRPEE 110

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q                                        +   E + +L    L+  
Sbjct: 111 IQ----------------------------------------QARAEERQALAEQNLTKR 130

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             D      L +  A +Q DL+        +  + +  +  Q  +L      ++E     
Sbjct: 131 TYDRQS--RLLKSGANAQQDLDDALARYDVAKAKYQ--VAVQNRILMEKGARWEEIASAR 186

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A+ L ++  DLE  +   A+  S L        +   L P       N  F+        
Sbjct: 187 AS-LHKLEADLETLKVKLAE--STLYAPSDAVVRSRNLEPGDMASAQNPVFTLG------ 237

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
             +M         ++R  +   ++  +K G      +        ++F+  I  I     
Sbjct: 238 --IM------DPKWVRTYIPEDKLGQIKPGMRG---YAVADSWPGERFEGWIGFISSTAE 286

Query: 375 ----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
               S +   L+T   YEV L + D         LR G P  V
Sbjct: 287 FTPRSVETPELRTSLVYEVRLNVHDPE-----NRLRLGMPVTV 324


>gi|289671375|ref|ZP_06492450.1| transport protein [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 265

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 75/259 (28%), Gaps = 28/259 (10%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             + +     L    + +   A L   Q ++     L    A +       +  + ++  
Sbjct: 5   ANVSAQESALLQARTQVTAAAASLKFAQAEVKRFAPLAASGADTHEHQESLQHDLARARA 64

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +      + K     I                     LEQ Q       +         E
Sbjct: 65  QYDAAQAQAKAGESQIQAS---------------RAQLEQAQAGVKQATADADQARVAVE 109

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              + S I G +  +++     +       M IVP   L  + A     Q+  ++ G  A
Sbjct: 110 DTRLTSRIHGRV-GDKTVQVGQFLGAGTRTMTIVPQESLYLV-ANFKETQVGLMRPGQPA 167

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSD 400
            +     + ++       +E + P    Q         T  + +V+    ++I  LA  +
Sbjct: 168 EIEVDALSGVK---LHGKVESLSPGTGSQFALLPPENATGNFTKVVQRVPVRIRVLAGEE 224

Query: 401 NNIELRNGFPAEVLFTAKN 419
               L  G   EV    ++
Sbjct: 225 ARKVLVPGMSVEVTVDTRS 243


>gi|260881583|ref|ZP_05404750.2| heat shock protein HtpX [Mitsuokella multacida DSM 20544]
 gi|260848424|gb|EEX68431.1| heat shock protein HtpX [Mitsuokella multacida DSM 20544]
          Length = 354

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 100/328 (30%), Gaps = 19/328 (5%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           L  L   + +     +    +    L+   D+ E     RE   +  +        +   
Sbjct: 37  LAGLGLFAYQQHEAAVKRAATQELTLSGNVDLREVTLSFRESDRIKEMLVEEGDTVEEGQ 96

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                    L + L + ++    +     K          HQ +   ++      + +Q 
Sbjct: 97  VLARLDTDELTINLRKTKAQIAAQQSTVEKLHNGTRTEELHQAEQK-LRAAEAAASNAQG 155

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-ISRDLEQNQRTF 273
              +++ +         + +   +          +EA              D+   +   
Sbjct: 156 VYERRQAVYDSVEGISAQELDNARTDAEAKQAAVEEAREALREAQNGPRQEDIAAAEANL 215

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                + +  E    Q  + +P  G I  ++     + A  S P+ K+    K  ++RA 
Sbjct: 216 QALEEEQSREEYLLSQYELRAPTNGVI-RSRLLEVGDMASPSTPVFKLSLLDKK-WVRAY 273

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ------QDNNLQTQEYY 387
           V    +  + +G +A V        ++K     +  I    ++      Q + L+T   Y
Sbjct: 274 VKESDLGRIYEGQSARVYI---DSQKDKPIAGQVGYI-ADTAEFTPKTVQTDELRTALVY 329

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLF 415
           EV + + D         LR G PA V  
Sbjct: 330 EVRVYVDDEENV-----LRLGMPATVKI 352



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 52/346 (15%), Positives = 119/346 (34%), Gaps = 33/346 (9%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISV--SSSGEILNEDNV----VEIKSPFSGIIKKFQVE 73
           +  +  + + GL  ++     E +V  +++ E+    NV    V +    S  IK+  VE
Sbjct: 29  ILAVVFVLLAGLGLFAYQQH-EAAVKRAATQELTLSGNVDLREVTLSFRESDRIKEMLVE 87

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  + +G  L   +        D   ++++  +  I  ++S ++ L+N     E     
Sbjct: 88  EGDTVEEGQVLARLDT-------DELTINLRKTKAQIAAQQSTVEKLHNGTRTEELHQAE 140

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL--ENKSSLLRAL 191
           ++ +  +          +       SV      +L   R+    +     E + +L  A 
Sbjct: 141 QKLRAAEAAASNAQGVYERRQAVYDSVEGISAQELDNARTDAEAKQAAVEEAREALREAQ 200

Query: 192 LSSHQKDLTMMK---NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
               Q+D+   +      E+    +  L  Q  +   +   +R  + E  +M      ++
Sbjct: 201 NGPRQEDIAAAEANLQALEEEQSREEYLLSQYELRAPTNGVIRSRLLEVGDMASPSTPVF 260

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             + L+     K +   ++++      E     +   +++ K I +   G I     F+ 
Sbjct: 261 KLSLLD----KKWVRAYVKESDLGRIYEGQSARVYIDSQKDKPI-AGQVGYIADTAEFTP 315

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV-KKGYTATVRFP 353
               Q  +                +V     ++V + G  ATV+  
Sbjct: 316 KTV-QTDE-------LRTALVYEVRVYVDDEENVLRLGMPATVKID 353


>gi|160871754|ref|ZP_02061886.1| efflux transporter, RND family, MFP subunit [Rickettsiella grylli]
 gi|159120553|gb|EDP45891.1| efflux transporter, RND family, MFP subunit [Rickettsiella grylli]
          Length = 383

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 66/194 (34%), Gaps = 21/194 (10%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           E +  L  I    D A        K +    EQN +    ++++   +     +KT+ +P
Sbjct: 120 EAQAKLAEITYHRDSAQFAVKAISKAVLDTDEQNLKNLMAQVAQQKAI---VAKKTLKAP 176

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +G  +   + ++  Y      ++ +       Y    +  +++  + +G    ++   Y
Sbjct: 177 FSGR-LGVSTVNAGQYLNPGDKVVTLQALD-PLYADFFIPQQKLAQLHQGARVNLKTDTY 234

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            D   K F   +  ++PI+     N++            +   ++  + L  G       
Sbjct: 235 PD---KVFTGKVTTVNPIVDVNTRNVKV-----------EATIANPQLRLYPGMFVSAEI 280

Query: 416 TAKNTTLAQEIIHP 429
                 L + +  P
Sbjct: 281 QTG--LLKRYLTLP 292



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 57/152 (37%), Gaps = 7/152 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++++  ++ GS++ +G  L+         L+   +   K     I   + +  F     
Sbjct: 85  GLVRQVYLKPGSEVNEGDRLVQLNADSEVALLHSLEAQAK--LAEITYHRDSAQFAV--K 140

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + +   ++ E+ L + + +     + V    + + +       T     YLN  D   K
Sbjct: 141 AISKAVLDTDEQNLKNLMAQVAQQKAIVAKKTLKAPFSGRLGVSTVNAGQYLNPGD---K 197

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
              L+AL   +       + L + +  ++ +L
Sbjct: 198 VVTLQALDPLYADFFIPQQKLAQLHQGARVNL 229


>gi|311746822|ref|ZP_07720607.1| putative auxiliary transport protein, membrane fusion protein (MFP)
           family [Algoriphagus sp. PR1]
 gi|126578504|gb|EAZ82668.1| putative auxiliary transport protein, membrane fusion protein (MFP)
           family [Algoriphagus sp. PR1]
          Length = 350

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 81/222 (36%), Gaps = 23/222 (10%)

Query: 189 RALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           + L    +   +++K L +K   V + DL      + +    L    +E   + R   E 
Sbjct: 68  QELKLMAETSGSIVKILRKKGDYVRRGDL------IVQVDDRLIRADYEIAKLNRDQAEK 121

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                   A       +  E+N++ F    ++   L+K      I +PI+G I  +  + 
Sbjct: 122 DLARYANLAETDAITKKQYEENEKAFKIANAQFDALKKRLSDTQITAPISGFINED-FYE 180

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                    P+ +I+ +     +  KV+  +I  VK G    V+      I  +KF   +
Sbjct: 181 MGTLVSPGMPIAEII-NKNPLKLSVKVSENEISKVKNGDVIPVKVNA---ISGEKFSGKV 236

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           + I        +       YEVIL+++      +   ++ G 
Sbjct: 237 DFIS-------DKADGSFKYEVILEMS----GKDADAIKAGM 267



 Score = 40.0 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 13/114 (11%), Positives = 43/114 (37%), Gaps = 5/114 (4%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           ++G       +  +      I+K    + G  + +G  ++  +D       ++ K++   
Sbjct: 60  ANGVFEPHQELKLMAETSGSIVK-ILRKKGDYVRRGDLIVQVDDRLIRADYEIAKLN--- 115

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            R   + + +    L     + +K +E  E+       ++ +   ++ +  I++
Sbjct: 116 -RDQAEKDLARYANLAETDAITKKQYEENEKAFKIANAQFDALKKRLSDTQITA 168


>gi|317970374|ref|ZP_07971764.1| membrane-fusion protein [Synechococcus sp. CB0205]
          Length = 435

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/361 (12%), Positives = 116/361 (32%), Gaps = 67/361 (18%)

Query: 23  LSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           + + G+ G++  W++  P+   VS  G  L  DN   + +   G +   +V+ G  + +G
Sbjct: 24  VCLAGVGGVLALWALFWPVPTEVSGQGVFLYPDNAGVLNARSGGQVLDVKVKVGEPVRKG 83

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L+T        +++ +    +     ++   + LD  + +    EK            
Sbjct: 84  QVLMTL----YLPVLEKQLAQQRGNLAQLERINADLDQRDLRRLETEK------------ 127

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                                         R++ +    L + S+   +L S++   L+ 
Sbjct: 128 ------------------------------RAVEVALAKLTDDSARYASLQSTYSTKLSN 157

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +  L  +  V+          + +  + +++        L  +     +   ++      
Sbjct: 158 LDWLARREVVA---------PLSREVVAVQQGFTNTSVDLDAVKIQRKKVLTDYEQVKLT 208

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           I  +    +    D   ++ + E        +L+   G+++  Q  S        Q L  
Sbjct: 209 IETEALNRRYQIDDLKRQIRVTEAQIAYDGEVLAGRDGSLLDIQVIS-GQTVSTGQRLGT 267

Query: 321 IV-PHS-----KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           I  P             A  +P   + +  G    +  P +      +F  I+ ++  ++
Sbjct: 268 IGRPQKPGAKAPPLRAVAYFSPADARRLPLGLRMEL-VPQWKQR--GRFGGIVGQVSQVL 324

Query: 375 S 375
           +
Sbjct: 325 T 325


>gi|328952701|ref|YP_004370035.1| efflux transporter, RND family, MFP subunit [Desulfobacca
           acetoxidans DSM 11109]
 gi|328453025|gb|AEB08854.1| efflux transporter, RND family, MFP subunit [Desulfobacca
           acetoxidans DSM 11109]
          Length = 456

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 66/213 (30%), Gaps = 16/213 (7%)

Query: 212 SQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQN 269
           ++ +L Q      ++  + +R       + L   +    ++  E A    ++    L Q 
Sbjct: 133 AEAELGQLRAKFLQAERDWVRARKLGPSDALSESDYDAAQSAFEVAKANVDVGRATLLQA 192

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKL 327
           +   A   + L+   +  +  TI +P+ G I+  +            +  L  I      
Sbjct: 193 KEGVAQSEAALSRASQNLDYCTIKAPVNGVIIDRRVNIGQTVVASLNAPSLFLIAKDLTR 252

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             I A V    I ++  G   T     Y     K     + +++  ++Q          Y
Sbjct: 253 LQIWAPVNEADIGNIHPGQPVTFVVDAYPRDTFKGVVGKV-RLNATMTQNVVT------Y 305

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            V +   +        +L     A V F     
Sbjct: 306 TVEVNTDNAEQ-----KLIPYLTANVRFLVAKR 333


>gi|253572341|ref|ZP_04849744.1| ABC transporter permease [Bacteroides sp. 1_1_6]
 gi|251838116|gb|EES66204.1| ABC transporter permease [Bacteroides sp. 1_1_6]
          Length = 415

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 92/260 (35%), Gaps = 35/260 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+   RL L+ +   L   L+  ++     + L E
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQERLQLKQERIGLNKELTLKKRRCEQYRRLVE 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  +++ D  Q E     +  +L             I+E   + N+   + +  +  ++ 
Sbjct: 168 EQLIAREDFRQAEEEYEAAKEQL-----------AVIDERIRQDNIFRESQISSLDENIR 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+      +L       E   I +PI G +    +          + + +I+     
Sbjct: 217 NMKRSLTLVRERL-------ENLKIKAPIDGQVGNLNA-QVGQSISAGEHIGQIITPD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFP----HYADIREKKFK----AIIEKIDPIISQQDN 379
             ++A++    ++ V  G  A   F      Y     K +              IS++  
Sbjct: 267 LKVQAQIDEHYVERVLPGLPAD--FTRDGGTYKLEVTKPYPEVKEGQFRTDLAFISERPE 324

Query: 380 NLQTQEYYEVILKITDLAFS 399
           N++  + Y + L++ D A +
Sbjct: 325 NIRAGQTYHINLQLGDPAQA 344



 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/213 (11%), Positives = 76/213 (35%), Gaps = 17/213 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G+++    ++ + +   G +++   E G+ +  G  +L   +       +++   +
Sbjct: 62  IRVIGQVMPS-RIIYMDAIEGGRVEERLKEEGAMVKAGDVILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++  ++N R  ++ E+  L       +  E   + R  +    L +      + F   
Sbjct: 121 AYQENELRNTRISMEQERLQLKQERIGLN-KELTLKKRRCEQYRRLVEEQLIAREDFRQA 179

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                 + +        I  + +  E++ S L   + + ++ LT+++   E         
Sbjct: 180 EEEYEAAKEQLAVIDERIRQDNIFRESQISSLDENIRNMKRSLTLVRERLEN-------- 231

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            + +  +      L   + +  +   HI ++  
Sbjct: 232 LKIKAPIDGQVGNLNAQVGQSISAGEHIGQIIT 264


>gi|228989111|ref|ZP_04149130.1| Bacteriocin ABC transporter [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228770615|gb|EEM19161.1| Bacteriocin ABC transporter [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 129

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 32/123 (26%), Gaps = 3/123 (2%)

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q    +  I   ++   I   +   +   VK      +             +  + 
Sbjct: 2   GMVIQAGALIGSIAEENENLIIELNLPSTERAKVKVQDDVEMVVAGLNQGEYGVIEGEVV 61

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN---GFPAEVLFTAKNTTLAQE 425
            I       +       Y++V +K        +N  + N   G   EV    +  T  + 
Sbjct: 62  SIAEDAIIDEKKESNNIYFKVQIKPKKKFLKGSNDNIVNLSLGMLTEVRIKYEKITYLKY 121

Query: 426 IIH 428
            + 
Sbjct: 122 ALE 124


>gi|224823585|ref|ZP_03696694.1| secretion protein HlyD family protein [Lutiella nitroferrum 2002]
 gi|224604040|gb|EEG10214.1| secretion protein HlyD family protein [Lutiella nitroferrum 2002]
          Length = 383

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/309 (10%), Positives = 92/309 (29%), Gaps = 8/309 (2%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              L  +    +        QL   +     + +      +++    + ++    R  + 
Sbjct: 33  ATVLRYQEATDDAYVNGHLIQLTPEIAGTVVSIAADDTDRVNAGQTVVTLEANDARLAFE 92

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              +   ++      L   ++  +   +L +       D  ++ + +  S     E +  
Sbjct: 93  RARNEFVQAVRETRQLIGSERQQSAQVSLRQSELARAEDDLKRRQQLAGSEALSAEELAH 152

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            ++ +         A  + A+    + ++   ++   A   ++L       ++  + +P+
Sbjct: 153 ARDAVATARAALAVAQEQAASTQALLGQETLASKPAVARAATRLKEAWLALQRTEVRAPL 212

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           AG +   +S           P++ IVP     ++ A     Q+  ++ G    +    Y 
Sbjct: 213 AGYVAR-RSVQVGQRVSAGSPMLAIVPLD-KVWVDANFKESQLHTIRLGQPVELHADMYG 270

Query: 357 DIRE------KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
                                 + +Q       +    V ++I   A       LR G  
Sbjct: 271 GDVTYHGKVAGLAAGTGSAFSLLPAQNATGNWIKVVQRVPVRIELDAAELKTHPLRVGLS 330

Query: 411 AEVLFTAKN 419
            +V    + 
Sbjct: 331 MQVEVQTRK 339



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 24/225 (10%), Positives = 76/225 (33%), Gaps = 18/225 (8%)

Query: 12  NHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
            +P+  + + L S++  I  I + +    +     ++ +     +++++    +G +   
Sbjct: 6   KNPSRQRGLILASLVFAIAAIGYGAYWATVLRYQEATDDAYVNGHLIQLTPEIAGTVVSI 65

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
             ++  ++  G  ++T E  +                  +  E++  +F+    +  +  
Sbjct: 66  AADDTDRVNAGQTVVTLEAND----------------ARLAFERARNEFVQAVRETRQLI 109

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              R++     L +     ++        +  S  +    +              ++ + 
Sbjct: 110 GSERQQSAQVSLRQSELARAEDDLKRRQQLAGSEALSAEELAHARDAVATARAALAVAQE 169

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
             +S Q  L   + L  K AV++     +E  +     E+R  + 
Sbjct: 170 QAASTQA-LLGQETLASKPAVARAATRLKEAWLALQRTEVRAPLA 213


>gi|309778733|ref|ZP_07673506.1| secretion protein HlyD [Ralstonia sp. 5_7_47FAA]
 gi|308922441|gb|EFP68065.1| secretion protein HlyD [Ralstonia sp. 5_7_47FAA]
          Length = 382

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 64/192 (33%), Gaps = 22/192 (11%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF------ADEMSKLTILEKTR 287
           I  QK  L  +N           + L++    ++              +++++       
Sbjct: 133 ISAQKEYLLALNTARQLKGSNMKDLLEDADATVQSAAGRLHVLGMSDADVAQIAKRGTPA 192

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           E  T+ +PI+GTIV  ++     +       M IV  +++ +    V    I  V+ G  
Sbjct: 193 EHLTLRAPISGTIVK-RNMDPGAFLNVGDSFMSIV-DTRVLWFTGNVYENDIASVRIGQP 250

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            ++R   Y +    +F   +  I P I    + L       V   +      + +  LR 
Sbjct: 251 ISLRTAAYPNR---EFTGRVSFIAPNIDPATHTLT------VRCDVP-----NTDGLLRP 296

Query: 408 GFPAEVLFTAKN 419
              A       +
Sbjct: 297 EMYATARIQTGS 308


>gi|285019919|ref|YP_003377630.1| hypothetical protein XALc_3157 [Xanthomonas albilineans GPE PC73]
 gi|283475137|emb|CBA17636.1| probable membrane fusion protein [Xanthomonas albilineans]
          Length = 369

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 23/140 (16%)

Query: 288 EQKTILSPIAGTIVYNQSFSSSNY----AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            +  + SPI G I      S   Y       +  +  I       ++ A+V  + I  V 
Sbjct: 187 RRYAMRSPIDGRISDIAV-SLGGYWNDTTATAMTVADI----SKVWVSAQVAERDIGQVF 241

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G  A +    Y D     F+  ++ +  ++      L       V + I      + + 
Sbjct: 242 VGQHAQIHVDAYPDA---SFEGTVQHVADLLDTDTRTLT------VRIAID-----NRDG 287

Query: 404 ELRNGFPAEVLFTAKNTTLA 423
            L+ G  A V   A+  +  
Sbjct: 288 RLKPGMFARVGLAARPRSAL 307


>gi|49088616|gb|AAT51589.1| PA2389 [synthetic construct]
          Length = 392

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 20/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           ++R        +  + +  +I L  W                   IE SVS+ G +    
Sbjct: 1   MRRTRSTRRALLVAVCLSPLIALAAWQAYPFRSNNFDTVSVSRGSIESSVSALGTLQPRR 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ +  SG I+K  VE G  + +G  L+  +       +D  + SI+ L+  +  ++
Sbjct: 61  YV-DVGAQASGQIRKLHVEAGDDVTEGQLLVEIDPSTQQAKVDAGRYSIEMLKAQLAEQR 119

Query: 115 SA---LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLT 169
           +          +   L     +R E +     +  +T +++  +   I     SL+    
Sbjct: 120 AQYTLARQQYQRQQRLAAGGATRTEDVQSAQAQMLATQARIEMYQAQIRQAQASLRSDEA 179

Query: 170 RM 171
            +
Sbjct: 180 EL 181



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 72/233 (30%), Gaps = 24/233 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++ + +    ++   L    ++++  L        E        +      +E  Q   
Sbjct: 108 IEMLKAQLAEQRAQYTLARQQYQRQQRLAAGGATRTEDVQSAQAQMLATQARIEMYQAQI 167

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIR 331
               + L   E       I +P++GT+V   +          Q  PL+  +       + 
Sbjct: 168 RQAQASLRSDEAELGYTRIYAPMSGTVVAVDAR-EGQTLNAQQQTPLILRIAKLSPMTVW 226

Query: 332 AKVTPKQIQHVKKGYTATV-RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY---- 386
           A+V+   I  VK G  A           R  K + I+      + Q +    +       
Sbjct: 227 AQVSEADIGRVKPGMPAYFTTLSGEGRRRTGKVRQILPVPPKPLDQSNQGGGSPTSGSGG 286

Query: 387 ---------YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                    Y V++ +      + + +L     A+V F A   T    +  P+
Sbjct: 287 QSGSGRVVLYTVLVDVD-----NGDHQLMAEMTAQVFFVAA--TAENILTAPV 332


>gi|320157965|ref|YP_004190343.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio vulnificus MO6-24/O]
 gi|319933277|gb|ADV88140.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio vulnificus MO6-24/O]
          Length = 368

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 70/207 (33%), Gaps = 21/207 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + F   + +    L+      ++        +      R  +++ +K++   + L E+ 
Sbjct: 90  PRPFELAVKAARFDLQKAAQSYQADSAAINVAKANEVAARVRVANARKNVERNRVLVERG 149

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +SQ  ++     +  +   L              +   ++A  EF    KE        
Sbjct: 150 TISQAAMDNMVAELDTAEANL-----------AQASSALEKAKQEFGPRGKE-------- 190

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                  +++L           +L+P  G I      +  +YA   QPL+  V ++   +
Sbjct: 191 NPEIQAVLNRLEQALLNLNHTKLLAPADGVITNMDV-AVGDYAGAGQPLLTFV-NNHSLW 248

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYA 356
           + A V    + ++K G    + F  Y 
Sbjct: 249 LTAMVRENSLAYLKTGDKVKIVFDAYP 275



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/202 (9%), Positives = 58/202 (28%), Gaps = 14/202 (6%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            N K     S        +I +     W+     +     + +      V+ I    SG 
Sbjct: 13  DNKKLKQARSFTYYIFAVVIALWVYTLWA-----DRVTPMTDQARVNGQVIRISPEVSGP 67

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  + N + +  G  L+  +          +   +       D +K+A  +  +   +
Sbjct: 68  ISQIHIANNATVKAGDELVNIDP---------RPFELAVKAARFDLQKAAQSYQADSAAI 118

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                     ++     + +   ++V     +    ++   +  + +   N     +   
Sbjct: 119 NVAKANEVAARVRVANARKNVERNRVLVERGTISQAAMDNMVAELDTAEANLAQASSALE 178

Query: 187 LLRALLSSHQKDLTMMKNLFEK 208
             +       K+   ++ +  +
Sbjct: 179 KAKQEFGPRGKENPEIQAVLNR 200


>gi|313681969|ref|YP_004059707.1| efflux transporter, rnd family, mfp subunit [Sulfuricurvum kujiense
           DSM 16994]
 gi|313154829|gb|ADR33507.1| efflux transporter, RND family, MFP subunit [Sulfuricurvum kujiense
           DSM 16994]
          Length = 404

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 75/224 (33%), Gaps = 19/224 (8%)

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL-----YDEANLEFA 256
              L      ++  L++ E  V  +   L    +E + + +            +A  E  
Sbjct: 111 TTKLASNVTSAKAVLSRAEANVAVAKASLSNAKNEWERVHQMYISTGGNYPSKQAVDEAD 170

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           N L      +           ++L   E    +  ++SPI G ++  +           Q
Sbjct: 171 NALASAKASVAAAIAQTQQSKAELAAGEDNLRKAVVVSPIDGIVLNRKVEPGQTVVAAMQ 230

Query: 317 P--LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              L  +        +   V    I  VK+  T T     Y +    +FK +I ++  + 
Sbjct: 231 TPVLFTMAKSLNTMKVIVSVDEADIGEVKERQTVTFTVDAYPNQ---EFKGVITQL-RLN 286

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           S+  N + T   Y+ ++++      ++++ LR G  A       
Sbjct: 287 SEIVNGVVT---YDAVVEVP-----NDDLRLRPGMTATAQVITG 322



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 53/147 (36%), Gaps = 21/147 (14%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLIT-----W---------------SILLPIEISVSS 46
           + L  + P        L I G++ L       W               + +  +  +VS+
Sbjct: 10  QTLGLDTPKKSSLKKYLIIGGVLALGIAGGWFWTHQNESEKTQFITTPAQITNLTTTVSA 69

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +G +    N +++    SG I    V+   ++  G  +   +  +    +   K  +   
Sbjct: 70  TGNLEP-TNTIDVGIEVSGTITDVLVDYNDRVHVGQLMARIDTTKLASNVTSAKAVLSRA 128

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFES 133
             ++   K++L    N+++ + + + S
Sbjct: 129 EANVAVAKASLSNAKNEWERVHQMYIS 155


>gi|213018985|ref|ZP_03334792.1| efflux transporter, RND family, MFP subunit [Wolbachia endosymbiont
           of Culex quinquefasciatus JHB]
 gi|212995094|gb|EEB55735.1| efflux transporter, RND family, MFP subunit [Wolbachia endosymbiont
           of Culex quinquefasciatus JHB]
          Length = 344

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 20/213 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE-- 267
           A+  +D  + +R      +E  + + + +     +N+   E +       K     +   
Sbjct: 79  AIYLSDGEKVKRGDVILKIEDYDRVEQVEKAKALLNQREIEYDSSRKLNTKGYGAQIRVE 138

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
                     + L  L+   E   I SPI G +         ++      +  IV   ++
Sbjct: 139 SAFTALQSAKADLKRLQLDLENTAIKSPIDGYVDKINVN-EGDFVNLGHKITDIVNFDQV 197

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +   V+  ++  +K G TA +       +  ++    +  I  I   +  +      Y
Sbjct: 198 LVV-LYVSENEVNKIKLGSTAQINL-----LDGRELVGEVSFISKIAEPKTGS------Y 245

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            V +K+TD       I L+ G  A V   +   
Sbjct: 246 RVEVKVTDNEI----ISLQ-GLTASVSLPSGER 273



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 50/151 (33%), Gaps = 1/151 (0%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG +    +   + S  SG +    + +G ++ +G  +L  ED +  + ++  K  +   
Sbjct: 58  SGTVNP-LHRFSLVSRTSGQVIAIYLSDGEKVKRGDVILKIEDYDRVEQVEKAKALLNQR 116

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
               D+ +            +E AF + +    D         +      I      + +
Sbjct: 117 EIEYDSSRKLNTKGYGAQIRVESAFTALQSAKADLKRLQLDLENTAIKSPIDGYVDKINV 176

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                 ++     D+ N   +L  L  S  +
Sbjct: 177 NEGDFVNLGHKITDIVNFDQVLVVLYVSENE 207


>gi|254422561|ref|ZP_05036279.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
 gi|196190050|gb|EDX85014.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
          Length = 412

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/329 (11%), Positives = 98/329 (29%), Gaps = 48/329 (14%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +  +   +    ++R  I+T  +   F            + R   + +           
Sbjct: 36  ASATVTTVRSQSTSIRQTIETNGTVEAFDLLSVSPRASGLQIRAVNVREGDRVAAGQILA 95

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V +  +  +   ++    ++ +          +++  +A L+  +++     +LFE+ A+
Sbjct: 96  VLDDSV--LRSEIEQSQAQVSAAIATVEQRRAEAAQAQASLAEARENFDRYSSLFEQGAI 153

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S   L ++   V  +   +        +    +     E N                   
Sbjct: 154 SAESLTERRTEVATAEQTVGAQQAAISSAQASVRSAEAEVNQ------------------ 195

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                      L+   +Q  +++P  G I   ++ +  + A    PL K++  +    + 
Sbjct: 196 -----------LKTQLDQTLVIAPSDGVIAE-RAATVGDTASTGTPLFKLI-SNDELELA 242

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            ++   Q+  V  G    +           + +  +  IDP +  Q          +  +
Sbjct: 243 VEIPQTQMAKVTPGTPVQI---SSNSDAALQLQGFVRSIDPTVDAQTR--------KATV 291

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           K+        +  LR G   +        
Sbjct: 292 KVG----LPGSDRLRPGMFLQAAIVVGTR 316



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 43/128 (33%), Gaps = 2/128 (1%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+   V  G ++  G  L   +D      I+  +  +      ++  ++           
Sbjct: 77  IRAVNVREGDRVAAGQILAVLDDSVLRSEIEQSQAQVSAAIATVEQRRAEAAQAQASLAE 136

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             + F+ R   L +       + ++     +++  +++  +   + S   +    E + +
Sbjct: 137 ARENFD-RYSSLFEQGAISAESLTE-RRTEVATAEQTVGAQQAAISSAQASVRSAEAEVN 194

Query: 187 LLRALLSS 194
            L+  L  
Sbjct: 195 QLKTQLDQ 202


>gi|160902281|ref|YP_001567862.1| RND family efflux transporter MFP subunit [Petrotoga mobilis SJ95]
 gi|160359925|gb|ABX31539.1| efflux transporter, RND family, MFP subunit [Petrotoga mobilis
           SJ95]
          Length = 359

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 75/208 (36%), Gaps = 25/208 (12%)

Query: 218 QQERIVYKSTLELRENIHEQKNM--LRHINELYDEANLEFA--NYLKEISRDLEQNQRTF 273
           + E ++ K + E+ E   E+ +      I    D+ + + A  N L +        +R  
Sbjct: 67  EIESVIPKVSGEIVEVYVEKGDEVEEGQILAKIDDLDYQIAYLNALNDYESSTNVGERMK 126

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
             +  +L   +K  E+  I SP++G +      S  +    +  ++ IV     + I+ +
Sbjct: 127 EVKRLQLEKAKKNLEETEIKSPVSGIVNTVNI-SKGDMVGTTSAILTIV---DRSTIKVE 182

Query: 334 VTPKQIQH--VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
               +I    + +G  AT+R               I  I P                V++
Sbjct: 183 TAVDEIDFPLINEGMDATIRIDPLNLEE----PGKITWISPTTQTDMG---------VVV 229

Query: 392 KITDLAFSDNNIE--LRNGFPAEVLFTA 417
              ++ F+ NN +  L  G  A+V    
Sbjct: 230 IPIEIEFTQNNAQNLLTPGITADVEIVT 257


>gi|332755013|gb|EGJ85378.1| multidrug resistance protein K [Shigella flexneri 4343-70]
 gi|332755413|gb|EGJ85777.1| multidrug resistance protein K [Shigella flexneri K-671]
 gi|332756497|gb|EGJ86848.1| multidrug resistance protein K [Shigella flexneri 2747-71]
 gi|332766181|gb|EGJ96391.1| emrA Membrane Fusion Protein [Shigella flexneri 2930-71]
 gi|333002105|gb|EGK21671.1| multidrug resistance protein K [Shigella flexneri K-218]
 gi|333002167|gb|EGK21731.1| multidrug resistance protein K [Shigella flexneri K-272]
 gi|333015992|gb|EGK35324.1| multidrug resistance protein K [Shigella flexneri K-227]
 gi|333016350|gb|EGK35681.1| multidrug resistance protein K [Shigella flexneri K-304]
          Length = 346

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 78/269 (28%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++    +L   + +   +YL       + +  R       +D      L ++  +S+  
Sbjct: 52  ALNKAKNNLANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKET 111

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +  +  S   L   I   K     +                         Q    +
Sbjct: 112 LEHTKDTLISSKAALNAAIQAYKANKALVMNTPL------------------NRQPQVVE 153

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                       ++  I SP+ G I   +S          Q LM +VP  +  ++ A   
Sbjct: 154 AADATKEAWLVLKRTDIRSPVTGYIAQ-RSVQVGETVSSGQSLMAVVPA-RQMWVNANFK 211

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+  V+ G +  +    Y +     F   +  I+          P  +   N ++  +
Sbjct: 212 ETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQ 269

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V + +      ++ + +     A + 
Sbjct: 270 RVPVEVSLDPKELMEHPLRIGLSMTATID 298


>gi|168818595|ref|ZP_02830595.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|205344414|gb|EDZ31178.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. HI_N05-537]
 gi|320087999|emb|CBY97761.1| UPF0194 membrane protein ybhG Flags: Precursor [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
          Length = 355

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 19/300 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F  + E L     +            I     ++      +          ++  
Sbjct: 63  VSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSEMRAAQSVV 122

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L S  K     ++L ++ AVS   L+        +   L     +       I 
Sbjct: 123 KQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESARAALETAKAQVSAAKAAIE 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                 Q +   A    +  + +   +   + +P  G + Y + 
Sbjct: 183 AARTSIIQ-------------AQTRVEAAQATERRIVAD--IDDSELKAPRDGRVQY-RV 226

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +Q   +K G  A +      D+R     +
Sbjct: 227 AEPGEVLSAGGRVLNMVDLSD-VYMTFFLPTEQAGLLKIGGEARLVLDAAPDLRIPATIS 285

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            +  +     +  + ++ + +  + V  +I       +   ++ G P             
Sbjct: 286 FVASVAQFTPKTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLDERVPW 345


>gi|162149123|ref|YP_001603584.1| multidrug resistance protein A [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209545133|ref|YP_002277362.1| secretion protein HlyD family protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161787700|emb|CAP57296.1| Multidrug resistance protein A [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209532810|gb|ACI52747.1| secretion protein HlyD family protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 363

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/356 (12%), Positives = 98/356 (27%), Gaps = 73/356 (20%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               V I     G +    V +   +  G  L   +D +     D    ++   R     
Sbjct: 59  AGRAVTIAPHVRGYVTALLVNDNQFVHAGDLLAKIDDRDYRAARDNAAATLDIARAQAAG 118

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +  L        V +K F  R   L+   G+  S  ++ F        +     + R  
Sbjct: 119 AQFGL-------LVAQKDFPGR---LIAAQGQLLSAQAQEFRAETDYRRQ---HAVARAA 165

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +   +           +A +   Q +L + +                          ++ 
Sbjct: 166 TTQQDIDYATAALQAAKAQVLQAQGNLQVAEP-------------------------VKA 200

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           NI   +  +   +    +A                          ++LT  E       I
Sbjct: 201 NISNTQTRVGQFDAQVTQAQ-------------------------AQLTQAELNLGWTEI 235

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G I   ++    ++  + Q +  IV      ++ A     Q+ H++ G    +  
Sbjct: 236 RAPHDGWISQ-RNIERGSFVSEGQSIFSIV--EPEVWVIANYKETQVTHMRPGQKVDIAV 292

Query: 353 PHYADIREKKFKAIIEKI----DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             Y  +     +  ++ I        S       T  Y +++ ++      D  + 
Sbjct: 293 DAYPFLN---LRGHVDSIQLGTGATFSAFPPENATGNYVKIVQRVPVKILIDEGLR 345


>gi|323344301|ref|ZP_08084527.1| Acr family acridine efflux pump AcrA [Prevotella oralis ATCC 33269]
 gi|323095030|gb|EFZ37605.1| Acr family acridine efflux pump AcrA [Prevotella oralis ATCC 33269]
          Length = 391

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 76/224 (33%), Gaps = 21/224 (9%)

Query: 204 NLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           ++ +K  V     + +L  + +    +    +  ++ Q    +    LY +  +   +Y 
Sbjct: 80  SVVKKGQVIAELDKTNLISELKTAQANLTSAQSTLNYQAENFKRYATLYKKGLVSADDYE 139

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---Q 316
                  +Q +   A     +   +      TI SPI G ++  +S         S    
Sbjct: 140 N-AQLTYKQAKEQVASAQETVRKAQTNLGYATITSPIDGIVLS-KSVEEGQTVAASFSTP 197

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  I        + A +    I  V  G   T     Y D +   F+ +++++    + 
Sbjct: 198 ELFTIAKDLTNMQVVADIDEADIGDVADGERVTFTVDAYPDDK---FEGVVKQVRQEATT 254

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +N +     YEV++        + +++L+ G  A V       
Sbjct: 255 TNNVVT----YEVVISAP-----NTDLKLKPGLTANVTIYTAER 289



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 4/188 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I+ S++++G I    +V  + +  SGI+ K  V+  S + +G  +   +       + 
Sbjct: 43  ANIQNSITATGTIEPVTSV-TVGTQVSGIVNKLYVDYNSVVKKGQVIAELDKTNLISELK 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             + ++ + +  ++ +          Y    V    +E+ +        +  S    V  
Sbjct: 102 TAQANLTSAQSTLNYQAENFKRYATLYKKGLVSADDYENAQLTYKQAKEQVASAQETVRK 161

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              +  Y ++   +  +             +S     L +  KDLT M+ + + +     
Sbjct: 162 AQTNLGYATITSPIDGIVLSKSVEEGQTVAASFSTPELFTIAKDLTNMQVVADIDEADIG 221

Query: 215 DLNQQERI 222
           D+   ER+
Sbjct: 222 DVADGERV 229


>gi|254787599|ref|YP_003075028.1| membrane fusion protein family protein [Teredinibacter turnerae
           T7901]
 gi|237686262|gb|ACR13526.1| membrane fusion protein family protein [Teredinibacter turnerae
           T7901]
          Length = 353

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 98/301 (32%), Gaps = 34/301 (11%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                E Q +       S     +   ++    SL+   T + S        +   +L +
Sbjct: 69  QIAVEENQFVAEGALLFSIDPAPYKIAVAKAQASLEQVRTDLTSQKAAYHSQQAALALAK 128

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
              +   K      NL E+  +S  D +    +   + LE+  + HE + +   +    D
Sbjct: 129 TKYNYAHKKQKREANLVEQKLISDADFDDATMLARIAKLEITASEHELERIADSLGGAVD 188

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E                 ++   F   +++L   +    +  I +P AG +         
Sbjct: 189 EP---------------VESHPRFQQALAELENAKLDLARTQIKAPFAGIVSQLP--KPG 231

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            Y       + +V  ++  ++ A +T K++ HV++     V    Y     K +  +++ 
Sbjct: 232 QYIHAGGAALSLV-AAERFWVEANLTEKELTHVQQSQPVNVTIDMYP---GKVWHGVVDT 287

Query: 370 IDPIISQQDNNLQTQ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + P    +   +  Q          +   V + +TD         LR+G  AE+      
Sbjct: 288 LSPATGAEFAIIPAQNATGNWVKIAQRVPVRIALTDQDDLP---RLRSGLSAEIKIDTGF 344

Query: 420 T 420
            
Sbjct: 345 R 345


>gi|224437694|ref|ZP_03658641.1| hypothetical protein HcinC1_06950 [Helicobacter cinaedi CCUG 18818]
 gi|313144143|ref|ZP_07806336.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313129174|gb|EFR46791.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 433

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/275 (11%), Positives = 80/275 (29%), Gaps = 39/275 (14%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +  +               +N   +  + +   A L+S +  L   +   +    + + L
Sbjct: 85  LEVLVEENDEVKKGQILARINPDSINQQIAKYTAQLNSAKAQLKASEQTLKDKKWNYDRL 144

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            +       ++  L                   E      NY      D++  + +  + 
Sbjct: 145 QELYNATNGASPSL------------------LELQNAKTNYTS-AGADVDIKRASIVEI 185

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKLTYIRAKV 334
            + +   +   +   I+SP+ G ++        + A    +  L K+  + +   + A +
Sbjct: 186 QTSIESAKIDLKNSIIISPVDGIVLSRNVEVGQSVAASFQAPTLFKVAENLEEMQLYASI 245

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--------- 385
           +   I  VK+G   T     Y D     F A + +++           +           
Sbjct: 246 SEADIGKVKEGQEVTFSVDAYPDRI---FHAKVNRVNFGSGDGSTISSSSSSSSASSSNI 302

Query: 386 -YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             Y   +++      + ++ LR    A        
Sbjct: 303 VIYRAKIEVD-----NKSLLLRPDMSATADIITAK 332



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 2/131 (1%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           N VEI S  SG++ +  VE   ++ +G  L           I      + + +  +   +
Sbjct: 72  NEVEIGSVISGLVLEVLVEENDEVKKGQILARINPDSINQQIAKYTAQLNSAKAQLKASE 131

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
             L      YD L++ + +        L   ++  +         + R+  +++    SI
Sbjct: 132 QTLKDKKWNYDRLQELYNATNGASPSLLELQNAKTNYTSAGADVDIKRASIVEI--QTSI 189

Query: 175 YLNRLDLENKS 185
              ++DL+N  
Sbjct: 190 ESAKIDLKNSI 200


>gi|78185945|ref|YP_373988.1| multidrug resistance protein A [Chlorobium luteolum DSM 273]
 gi|78165847|gb|ABB22945.1| multidrug resistance protein A [Chlorobium luteolum DSM 273]
          Length = 332

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 50/163 (30%), Gaps = 11/163 (6%)

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +E                ++L   E      +I +P  G I      +   + Q  Q L+
Sbjct: 173 EEAESRYRSTLAQVELRQAELRNAELQLSYTSIKAPANGHISRKNVHA-GQFVQPGQQLI 231

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-- 377
            +V  S   ++ A     Q++ ++ G    +R   + D      +  IE I      +  
Sbjct: 232 ALV-GSGRLWVVANFKETQMEKIRPGQNVLIRVDAFPDEEY---EGTIESISAGTGAKFS 287

Query: 378 --DNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLFT 416
               +  +  + +V   + +  +        L  G    V   
Sbjct: 288 LLPPDNASGNFVKVAQRVPVKIVFDRKPERHLSTGMNVVVDVR 330


>gi|322367864|ref|ZP_08042434.1| Patched family protein [Haladaptatus paucihalophilus DX253]
 gi|320552571|gb|EFW94215.1| Patched family protein [Haladaptatus paucihalophilus DX253]
          Length = 1255

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 71/200 (35%), Gaps = 3/200 (1%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHST 148
           E     +  K   + L+   +  +   D LN     L++  E  +E  Q L   G+    
Sbjct: 170 ELQQRGEQLKERGEELQARGEKLQQRSDELNRSKQDLQQRGEELKEEGQELKQRGQTLQQ 229

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            S   N   + +    +    + + +  ++  L N+S  L+       +    ++     
Sbjct: 230 RSDELNESKAQLQAKGQELQAQAKQLNESKAQLRNQSEELKQRAQELNESRAELEQRQAN 289

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             V   +LNQ +R +      L+E     +   ++      E      + L+E   +L+ 
Sbjct: 290 LEVRAQELNQTQRELAARNESLQERRATIEEAHQNGTINDTEYEQRL-DSLREEQAELKA 348

Query: 269 NQRTFADEMSKLTILEKTRE 288
           +Q   A+E + L    +  E
Sbjct: 349 DQAQLANESAALQQDRQELE 368


>gi|254421635|ref|ZP_05035353.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
 gi|196189124|gb|EDX84088.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
          Length = 447

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 69/235 (29%), Gaps = 26/235 (11%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                S +    ++     L  +        ++  +         A LS  Q D   ++ 
Sbjct: 107 LAQLDSDLQTTTVNQAQAELSARQAETAQAAVSISEARAAVVQAEATLSQAQTDAQRLRQ 166

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L  K A++       E  V  +   LR          +      D  + + A        
Sbjct: 167 LANKGAIALQAAEAAELAVTNAQQALRSAQARVDAQAQAAASAADRIDAQQAI------- 219

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                          +T  +K      + SP+ G ++  Q     ++ +    ++++   
Sbjct: 220 ---------------VTQTQKQLSYADLRSPLTGIVLSKQVD-IGSFVESGATILELG-D 262

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
                +  +V+   I  +  G +A+V    +    E      I +I P+  +   
Sbjct: 263 ISSLEVTIQVSELDISRLSIGQSASVTLDAFP--EEGAISGRITQIAPLADEVSR 315



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 47/390 (12%), Positives = 116/390 (29%), Gaps = 39/390 (10%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTFED 89
           ++   +  + S +G +        I+     +  SG +    V+ G  + Q   L   + 
Sbjct: 53  AVQTRLAETGSIAGLLTYTGTTRPIQQVALRAQVSGEVINLLVDVGDVVAQDMLLAQLDS 112

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              T  ++  +  +   +   +T ++A+     +  V++      + Q      +  +  
Sbjct: 113 DLQTTTVNQAQAELSARQA--ETAQAAVSISEARAAVVQAEATLSQAQTDAQRLRQLANK 170

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +      +   ++      +RS           ++     + + Q  +T  +      
Sbjct: 171 GAIALQAAEAAELAVTNAQQALRSAQARVDAQAQAAASAADRIDAQQAIVTQTQK----- 225

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              Q         +    L  + +I         I EL D ++LE    + E+       
Sbjct: 226 ---QLSYADLRSPLTGIVLSKQVDIGSFVESGATILELGDISSLEVTIQVSELDISRLSI 282

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
            ++ +  +           + T ++P+A  +                     VP      
Sbjct: 283 GQSASVTLDAFPEEGAISGRITQIAPLADEVSRL------------------VPVQVTI- 323

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIR--EKKFKAIIEKIDPIISQQDNNLQTQEYY 387
               ++    Q +  G  A V+F      R         + K     +      Q+++  
Sbjct: 324 --PNLSGSNSQKMGSGLLARVQFSPTQQSRVVVPATALTLSKSGKDSTLFVIEEQSEQTV 381

Query: 388 EVILKITDLAFSDNNIELRNGF-PAEVLFT 416
            +   +     + + IE+ +G  P E   T
Sbjct: 382 AIARSVKTGDRAQDQIEIVSGLAPGEAFIT 411


>gi|149277818|ref|ZP_01883958.1| possible membrane-fusion protein [Pedobacter sp. BAL39]
 gi|149231506|gb|EDM36885.1| possible membrane-fusion protein [Pedobacter sp. BAL39]
          Length = 407

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 97/310 (31%), Gaps = 24/310 (7%)

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL--- 168
           +E+     +  + +    A E+        +        KV    +++V ++        
Sbjct: 24  SERPEKQPVQEEAEGHHDAHEAELSLSAQQMEAIDLQIGKVEQKNLTAVVKASGQLAVPP 83

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
                + +    +  K  +L        + L +M+N  ++    Q +    +        
Sbjct: 84  QNEAKVNVLAGGIIRKIVVLEGQKVKKGQTLAIMEN--QEMIKLQQEYLSTKSGFSFVAA 141

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E      + K       + + ++   +      I   LE   R      ++++    T  
Sbjct: 142 EYSRQ-QQLKAAGAGTGKTFQQSEANYQTEQSHIRA-LESQLRQIGISPARVSSGNIT-S 198

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           Q  I++PI+GTI    S ++  Y Q    LM IV  +   +    V  K +  VK G   
Sbjct: 199 QIPIIAPISGTI-GLISVTTGAYVQPGNSLMDIV-DNSKIHADLLVYEKDLNKVKIGQHV 256

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           + R     +   ++ + ++  I+         L           I     S+    L  G
Sbjct: 257 SFRLT---NQDNQQIEGVLNGINKSFENDTKGL-----------IVHAVISNPMSNLIPG 302

Query: 409 FPAEVLFTAK 418
                L +  
Sbjct: 303 MYVTGLISVG 312



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 2/133 (1%)

Query: 40  IEISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +   V +SG++ +   N  ++     GII+K  V  G ++ +G  L   E+ +    +  
Sbjct: 69  LTAVVKASGQLAVPPQNEAKVNVLAGGIIRKIVVLEGQKVKKGQTLAIMEN-QEMIKLQQ 127

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           + +S K+    +  E S    L        K F+  E           +  S++   GIS
Sbjct: 128 EYLSTKSGFSFVAAEYSRQQQLKAAGAGTGKTFQQSEANYQTEQSHIRALESQLRQIGIS 187

Query: 159 SVYRSLKMKLTRM 171
               S     +++
Sbjct: 188 PARVSSGNITSQI 200


>gi|312877894|ref|ZP_07737839.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus
           6A]
 gi|311795320|gb|EFR11704.1| conserved hypothetical protein [Caldicellulosiruptor lactoaceticus
           6A]
          Length = 271

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 61/169 (36%), Gaps = 6/169 (3%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              K +     +   + ++    + ++I   ++  +    +    +  L+K      ++S
Sbjct: 5   GRIKKIFVKQYDRIKKGDILIEFFDQDIREQIDVKKDQIYETKEAIENLKKEINNCKVIS 64

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKI-VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           P+ G I      S          +  I  P+       +K++   +  VKKG    + F 
Sbjct: 65  PVNGVISNLNV-SEGKLINMGDSICSIWSPND--LIFESKISEYDVYKVKKGDRVKLNFT 121

Query: 354 HY-ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
            + + I E +   ++E I+P     ++  Q   ++ + ++  D      
Sbjct: 122 PHSSYIPESELDGVVESINP-RPLDEDLSQNISWFNIKVRFHDENIKRG 169



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           G IKK  V+   +I +G  L+ F D +  + ID+KK  I   +  I+  K  ++
Sbjct: 5   GRIKKIFVKQYDRIKKGDILIEFFDQDIREQIDVKKDQIYETKEAIENLKKEIN 58


>gi|237817215|ref|ZP_04596207.1| HlyD family secretion protein [Brucella abortus str. 2308 A]
 gi|237788028|gb|EEP62244.1| HlyD family secretion protein [Brucella abortus str. 2308 A]
          Length = 338

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 49/396 (12%), Positives = 114/396 (28%), Gaps = 85/396 (21%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M+LL +I  +  +  +            GE +    +   +      ++   V+ G ++ 
Sbjct: 25  MSLLCVIPFVSSLFAACGTQSLAVGYVEGEFVQLAPLQVAQ------VRDIAVKRGDRVE 78

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P+ T ED +                  I   ++       +  +       R E++ 
Sbjct: 79  AGEPIATVEDTD----------------ARIAVAQAEAALAQAQAQLANLQVGKRPEEIA 122

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                                    LE      RA     Q+ L
Sbjct: 123 V----------------------------------------LEAAVRSARAQADDAQRTL 142

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++L  +   +Q  L+     +  +   + ++       +  +    +E         
Sbjct: 143 LRTRDLARRGVATQAQLDDAATQLEVAEAAIGQSTANL--AVGKLPARPEEIKA------ 194

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                     +       ++L   +  R Q+TI +P AG I      +  + A  S P++
Sbjct: 195 ---------AENAVKSAEAQLQTAKWQRAQRTIEAPAAGRITDV-VRNPGDIAGPSAPVL 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++P      ++  +  ++   V  G         + D      +A +  + P       
Sbjct: 245 TMLP-DGAVKLKVYIPEERFSDVAVGSV----LSVHCDGCAPGLQARVSYVSPDPEFTPP 299

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + + E  + ++ + +    D    L+ G   +V  
Sbjct: 300 VIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 335


>gi|187730269|ref|YP_001881561.1| multidrug resistance protein A [Shigella boydii CDC 3083-94]
 gi|187427261|gb|ACD06535.1| multidrug resistance protein A [Shigella boydii CDC 3083-94]
          Length = 390

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 80/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N   L+    + +  L+  Q D      L   N + +
Sbjct: 98  RQAFEKAKTALASSVRQTYQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E          E+           
Sbjct: 158 EELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWL------ 211

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I+SP+   +   ++         + PLM +VP +   ++ A 
Sbjct: 212 ------------ALERTRIVSPMTAYVSR-RAVQPGAQISPTTPLMAVVPATN-MWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               QI +++ G   T+    Y D    K+   +  +D          P  +   N ++ 
Sbjct: 258 FKETQIANMRIGQPVTITTDIYGDDV--KYTGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++        ++ +
Sbjct: 316 VQRLPVRIELDQKQLEQYSLRI 337



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +   IGI   +        + +  +        N ++I S  SG + K   +N   + 
Sbjct: 32  IIIAVAIGIYWFLVLRHFEETDDAYVA-------GNQIQIMSQVSGSVTKVWADNTDFVK 84

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKN-----LRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +G  L+T +  +     +  K ++ +      +  I++++   +    K  + +   +  
Sbjct: 85  EGDVLVTLDPTDARQAFEKAKTALASSVRQTYQLMINSKQLQANIEVQKIALAKAQSDYN 144

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALL 192
               L           +     ++S    L + + +  +     L   LE++ ++ +A  
Sbjct: 145 RRVPLGNANLIGREELQHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAAT 204

Query: 193 SSHQKDLTMMKN 204
                 L + + 
Sbjct: 205 EVRNAWLALERT 216


>gi|329965048|ref|ZP_08302036.1| hypothetical protein HMPREF9446_03653 [Bacteroides fluxus YIT
           12057]
 gi|328524198|gb|EGF51272.1| hypothetical protein HMPREF9446_03653 [Bacteroides fluxus YIT
           12057]
          Length = 300

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 82/247 (33%), Gaps = 33/247 (13%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         ++S+   R D+  + +  +  +   Q++     NL    A ++     
Sbjct: 72  QLYLKKLQLEASVKSVEGQRPDILKQVAATKEQIVQAQRERDRAANLLRVGAANRKQWED 131

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E ++     +L       +N  R +        ++ A                      
Sbjct: 132 AESLLEVLRKQLAAQNSTLQNSDRSLTWQSSSVGIQVAQ--------------------- 170

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E    +  I+SP+ GT++  +   +   A    PL K V   +  Y+RA +T +Q
Sbjct: 171 ----IEDQLRKCHIVSPLTGTVLA-KYAEAGELAAPGTPLFK-VADMEQIYLRAYITSEQ 224

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV +  Y     K++  ++  I              + +    Y V + +
Sbjct: 225 LSEVKLGQKVTV-YADYGKEVRKEYPGVVTWISDSSEFTPKTILTKDERANLVYAVKVAV 283

Query: 394 TDLAFSD 400
            +     
Sbjct: 284 KNDGMLK 290


>gi|291460336|ref|ZP_06599726.1| auxiliary transport protein, membrane fusion protein [Oribacterium
           sp. oral taxon 078 str. F0262]
 gi|291417091|gb|EFE90810.1| auxiliary transport protein, membrane fusion protein [Oribacterium
           sp. oral taxon 078 str. F0262]
          Length = 450

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 104/328 (31%), Gaps = 56/328 (17%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K   V  G ++  GT L   ++ +               R     E S+L+    K ++
Sbjct: 67  VKAVLVSEGQEVSPGTELFQLDETD-----------YIYQRDQQRAELSSLEAQLQKAEL 115

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                 S EE +                                         +L+++  
Sbjct: 116 DPLMTASPEEYI----------------------------------------GNLKSQLE 135

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              A LS+ +KD    ++LF+   +S+ D  +      K+  +        +   + + E
Sbjct: 136 SADAALSALEKDYRAAESLFQSGDISEADREKARAAYEKAKSDAETARARYERSSQSLRE 195

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +         +    D    Q       + L+ L++   + ++ +  AG I      
Sbjct: 196 LEKQGISGKKLNEQFYGADRAALQSKIDALNAALSQLDEKIGKASVRANRAGIITALPIR 255

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
              +     Q  ++I    +  Y+ AKV       ++ G    V+           F+  
Sbjct: 256 DL-SVISAGQEAVRIKGSGEA-YVSAKVLSSVAPLLQIGDPVDVKLKLRGSEEH--FEGE 311

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKIT 394
           I +I    +++  +    + Y V L+++
Sbjct: 312 IAEI-RGYAEKGVSALGSDEYRVELRVS 338


>gi|312130793|ref|YP_003998133.1| efflux transporter, rnd family, mfp subunit [Leadbetterella
           byssophila DSM 17132]
 gi|311907339|gb|ADQ17780.1| efflux transporter, RND family, MFP subunit [Leadbetterella
           byssophila DSM 17132]
          Length = 352

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 82/264 (31%), Gaps = 29/264 (10%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L          Y  RL+   + + L   + ++ + +   + L+E   V        +   
Sbjct: 29  LDENFKNKIEFYTTRLEEVVEGTHLTGSIIANPEKVVEYRPLWEGTVVKTYFTLGDKVSK 88

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +   E+R              E   +A       LK +  D   +Q    + ++ L +L
Sbjct: 89  GQLLAEIRSTEGNTLQATLSSLESRIKAAERKKENLKHLLADGMASQTELEEAIADLEVL 148

Query: 284 --EKTREQKT------------ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
             EK R Q              + +P +G +               +P M ++   +  +
Sbjct: 149 KSEKVRAQTESKWNHSQEGYFKVYAPTSGVVTEKSINIGEQVVAGGEP-MFVISDLEDLW 207

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   +    +Q +++G   ++    +     + F   I KI P   +             
Sbjct: 208 LMLNIYASNVQRIQEGMEVSISTLSFP---GELFSGRITKISPAFDED-----------A 253

Query: 390 ILKITDLAFSDNNIELRNGFPAEV 413
            +      F +   +L+ G   +V
Sbjct: 254 RVLKARSTFENRGGKLKPGMTVDV 277



 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 8/111 (7%)

Query: 36  ILLPIEISVSSS---GEILN-EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
               +E  V  +   G I+   + VVE +  + G + K     G ++ +G  L      E
Sbjct: 40  YTTRLEEVVEGTHLTGSIIANPEKVVEYRPLWEGTVVKTYFTLGDKVSKGQLLAEIRSTE 99

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
              L    + ++ +L   I   +   + L +       +    EE + D  
Sbjct: 100 GNTL----QATLSSLESRIKAAERKKENLKHLLADGMASQTELEEAIADLE 146


>gi|294102204|ref|YP_003554062.1| efflux transporter, RND family, MFP subunit [Aminobacterium
           colombiense DSM 12261]
 gi|293617184|gb|ADE57338.1| efflux transporter, RND family, MFP subunit [Aminobacterium
           colombiense DSM 12261]
          Length = 386

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 86/222 (38%), Gaps = 21/222 (9%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE---LYDEANLEFANYL 259
           +++  + A  +  +   E  V ++   L     E++   R + E      + + +   YL
Sbjct: 106 RDIDAQIASLKARIAVAEAQVAEARAALNNAKTERERYERLLKEGFSTQQQLDNKVTAYL 165

Query: 260 K-EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           + E    L +   T     S+L  LE T  +  I SPI GT++ + + ++      S  +
Sbjct: 166 QAEARYKLSEA--TVLQTRSELKNLEVTLSEYYIKSPITGTVLNDYAHTTGAMMGPSLAV 223

Query: 319 MKIVPHSKLTYIRAKVT-PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++I  + +      KV   + I  ++KG    +R     D   K F+  IE+I P + + 
Sbjct: 224 VEIA-NVETLKAVVKVPEARAIG-LEKGMKGWIRSDGLGD---KVFEGAIERISPFVKED 278

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              +Q + Y         +    N   L  G  A V    + 
Sbjct: 279 TRTVQVEVY---------VVNGQNGSRLVPGMFARVFIVRQE 311



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 39/99 (39%), Gaps = 3/99 (3%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            V +    +G ++ F V  G  I +G  +   +  +    I   K  I      +   ++
Sbjct: 72  RVVVYPKVTGRLEFFHVRQGDPIEKGQVVAVLDHRDIDAQIASLKARIAVAEAQVAEARA 131

Query: 116 ALDFLNNKYDVLEKAFE---SREEQLLDFLGKYHSTCSK 151
           AL+    + +  E+  +   S ++QL + +  Y    ++
Sbjct: 132 ALNNAKTERERYERLLKEGFSTQQQLDNKVTAYLQAEAR 170


>gi|146295698|ref|YP_001179469.1| hypothetical protein Csac_0658 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409274|gb|ABP66278.1| hypothetical protein Csac_0658 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 533

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/401 (11%), Positives = 127/401 (31%), Gaps = 37/401 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++   +  G  +     + I SP +  +K   ++  + + +G  +   +D +    I  K
Sbjct: 51  LDEETTLRG--VVTSEEIPIFSPVTAKVKNVFIKENNYVKKGDLIAILDDTKIRLEIKRK 108

Query: 100 KVSIKNLRCHIDT--------------EKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           +   ++L   +++              E   L+    + DV+ K     +    D +   
Sbjct: 109 EREKQSLYKDLESLYTRLGECSVYSPFEGQVLEVYVKEKDVISKGSPICKVSKTDLVYLT 168

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            +    +F          + +           R       +      +   + +   +++
Sbjct: 169 VAFPKWLFKNIKQGDPIEIILHEFGQEIKGYVRSKSSVFYTDENGFPAFDVEVVLKERSI 228

Query: 206 -FEKNAVSQNDLNQQE-RIVYKSTLELRENI------HEQKNMLRHINELYDEANLEFAN 257
             +  A    + N Q+ R +    +   E++         K++        ++  L    
Sbjct: 229 PLKARAFCIFEYNGQKVRSLNDGIITAEEDVIKSPTDGVVKSIYISKFSQINKNQLIIEL 288

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
              EI+  +E  +        +++   K   +  I + + G +             + + 
Sbjct: 289 SDDEITEQIENKKTQIEQIEEEISEYRKELSRFVIKATLDGIVSDVNIV-EGKILNEGEK 347

Query: 318 LMKI-VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDPIIS 375
           L  I  P++      +K++  ++  +KKG    ++F     I  ++     +E +     
Sbjct: 348 LAVIWNPYN--LIFESKISELELDRIKKGQKVMLQFKIPGRIGVQEIINGTVEMVGSKPL 405

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           ++  +     +Y V +          +  ++ G  A     
Sbjct: 406 EESKDTNI-SFYPVKI-------GFKSDRIKRGMHATAQIK 438


>gi|309791697|ref|ZP_07686189.1| multidrug resistance efflux pump-like protein [Oscillochloris
           trichoides DG6]
 gi|308226319|gb|EFO80055.1| multidrug resistance efflux pump-like protein [Oscillochloris
           trichoides DG6]
          Length = 471

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 96/312 (30%), Gaps = 22/312 (7%)

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
              LR     E++A      +       +E++E    D         +        +   
Sbjct: 177 AAKLRAESQLEQAANALRTAQDTYSRIYWENQEIGADDLTQAQKDAETAALRAVEDAEQA 236

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
             + ++    +    R   E   + +R   +   K LT      +K A ++  ++Q E  
Sbjct: 237 LAQAQIALQNAQDAERSGTEVAEAQVRDAQARLDKLLTPAAA--DKLAAARAQVSQAEAN 294

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR-DLEQNQRTFADEMSKLT 281
           + +   E      ++   L       D+A    A      S  DL           + L 
Sbjct: 295 LNRLRGE------QRAGSLAAARAQIDQAEANLAGLRAGTSEGDLNVAAAQIQRAEAALN 348

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           + +    +  + +P AGTI    + +   Y     PL+ +   S        +T + I  
Sbjct: 349 LAQVALAETELRAPFAGTIASI-TPAPGEYVSMGTPLITLADLSAWQIETTDLTEQDIAR 407

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           V +G    +      D+   + + ++  I  +      N Q    Y V +          
Sbjct: 408 VHEGDQVLITLDALPDL---ELQGVVSHIRLV----GENKQGDITYTVTITP-----ETQ 455

Query: 402 NIELRNGFPAEV 413
           +  LR    A V
Sbjct: 456 DSRLRWNMTASV 467



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/235 (9%), Positives = 62/235 (26%), Gaps = 22/235 (9%)

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS------ 115
           P  G++ +  V  G+ +    PL+  E       +   +  ++  +   D   +      
Sbjct: 42  PVGGVVAEVLVSEGATVQADQPLIRIERSRLEAALAQAQAEVQVAQASYDRLLAGATPEQ 101

Query: 116 -------------ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
                         L  ++      + A    +               +  +   +    
Sbjct: 102 IAAAEAQLAQARAGLRQVSGGVTPSDIAAAQAQLAQAQAALAQLQQGPEDADLRQAQAQL 161

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +      + +        L  +S L +A  +      T  +  +E   +  +DL Q ++ 
Sbjct: 162 AQAQANAQNQRDSFVAAKLRAESQLEQAANALRTAQDTYSRIYWENQEIGADDLTQAQKD 221

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
              + L     + + +  L         A     +  +     +   Q      +
Sbjct: 222 AETAAL---RAVEDAEQALAQAQIALQNAQDAERSGTEVAEAQVRDAQARLDKLL 273


>gi|294625647|ref|ZP_06704270.1| multidrug resistance efflux pump [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292600070|gb|EFF44184.1| multidrug resistance efflux pump [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 362

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 88/305 (28%), Gaps = 29/305 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V + A   R + L     + ++   +     + +   +L     +  S      +  
Sbjct: 76  QVPVQDFAHVKRGQLLARIDDRIYAQQLEQAKAQVQTAQANLANWDQQRHSAEATIAEQR 135

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  +A     +      + L  +  VS+ D               R+     +    
Sbjct: 136 AALSSNQAQRDRTRSAYARTQQLASQQLVSEQD---------------RDTAFAARAQAE 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                   A        + +S +    +   A+  + + + +   +   IL+P  G +  
Sbjct: 181 AGVAQARAAVQAAEENARSVSVNRAALEAAVANAQAAVQLAQINLDNTRILAPRDGQLGQ 240

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP     +I A     Q+  ++ G  A+       + R   
Sbjct: 241 LGVR-QGAYVTNGTQLMSLVP--DTLWIVANFKETQMARIRIGQRASFTVDALDNAR--- 294

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVL 414
               ++ I P    +      +  T  + ++  +I      D +      LR G    V 
Sbjct: 295 LHGRVQDISPAAGSEFSVLPADNATGNFVKIAQRIPLRISVDPDQPLAPRLRPGMSVVVA 354

Query: 415 FTAKN 419
               +
Sbjct: 355 VETDS 359



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 56/174 (32%), Gaps = 18/174 (10%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSI-----------LLPIEISVSSSGEILNE 53
           M      + PA  +R     + GI+G    ++           L P   ++  +   +  
Sbjct: 1   MNTPADSSPPADRQRRRRRRLAGIVGFGGLALIGVALVLYAWRLPPFVSAIERTENAMVH 60

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             +  I    SG + +  V++ + + +G  L   +D        +    ++  +  + T 
Sbjct: 61  GQITVIAPQVSGYVTQVPVQDFAHVKRGQLLARIDD-------RIYAQQLEQAKAQVQTA 113

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           ++ L   + +    E     +   L     +   T S        +  + +  +
Sbjct: 114 QANLANWDQQRHSAEATIAEQRAALSSNQAQRDRTRSAYARTQQLASQQLVSEQ 167


>gi|300726074|ref|ZP_07059532.1| secretion protein HlyD family protein [Prevotella bryantii B14]
 gi|299776681|gb|EFI73233.1| secretion protein HlyD family protein [Prevotella bryantii B14]
          Length = 359

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/354 (13%), Positives = 108/354 (30%), Gaps = 70/354 (19%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK+ +      + +G  L+  ED E        ++++      +  +KS    ++   
Sbjct: 57  GFIKEIRFNEFQYVHKGDTLVIIEDAEF-------RLALAQAEAGMKGQKSGTSVVDASM 109

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           + +                   S    V + GI      +                    
Sbjct: 110 NTV-------------------SANVNVASAGIKVASAGI-------------------- 130

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +  + + +KD      L +K AV+Q   +  + +  ++    +             
Sbjct: 131 -AEAKEGMDNAKKDYDRFAALLQKGAVTQQQFDHAKTLYEQAHSRYQAAQARLSQAAASR 189

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                      A    E    L Q++   +   ++L +         I +P  G +    
Sbjct: 190 KAT--------AVVNNETLHRLGQSKAGESVAEAQLNLARLNISYTVITAPCDGYVGRKD 241

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                   Q  Q L+ I+  + +  I A     Q+ H+  G     +      +    FK
Sbjct: 242 IH-VGQLMQPGQLLVDIIDQNDVWVI-ANYRESQMHHITVGAPVNFKADAIPGVT---FK 296

Query: 365 AIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
             ++ I           P+ +   N ++ +++  V +++T      +  +L +G
Sbjct: 297 GKVKSISAASGSAYSNMPVDNATGNFVKVEQHVPVRIELTTDNNQADIKKLLSG 350


>gi|194290055|ref|YP_002005962.1| multidrug resistance efflux pump [Cupriavidus taiwanensis LMG
           19424]
 gi|193223890|emb|CAQ69899.1| Putative Multidrug resistance efflux pump [Cupriavidus taiwanensis
           LMG 19424]
          Length = 379

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 81/261 (31%), Gaps = 20/261 (7%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
                ++   R +LE+    + A  +  +     ++        ++ D  + ER+  +  
Sbjct: 98  QQYRIAVDRARAELESTRRQIGASTAGIESAQASLRAARANEVKARQDSERLERLYSEDP 157

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             +     E              A        +E     +++        S L   E   
Sbjct: 158 GTISLRRLEVARASLEQAVSQVAAARAEVQRAREQEGGSDEDNAKLRSAASALEKAELDL 217

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               + +  AG +   ++     +A    P+M ++P     +I A++T   +  V+ G  
Sbjct: 218 ANTQVRARAAGLVTDLRTD-VGQFAAAGNPVMTLIPIHD-VWINAEMTENNLGRVEPGTP 275

Query: 348 ATVRFPHYADIREKKFKAIIEKID--------------PIISQQDNNLQTQEYYEVILKI 393
             +            F+  +  +               P +    + L+  + + VI++ 
Sbjct: 276 VAIVLDALPGR---VFEGRVRSVGYGVNVGPGTPPGSLPTVQNSRDWLRPAQRFPVIVEF 332

Query: 394 TDLAFSDNNIELRNGFPAEVL 414
                +     +R G  AEV+
Sbjct: 333 DRGELAPLR-GIRVGGQAEVM 352


>gi|77747942|ref|NP_638835.2| multidrug resistance efflux pump [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|77761103|ref|YP_241771.2| multidrug resistance efflux pump [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 363

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 89/306 (29%), Gaps = 29/306 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V + A   R + L     + ++   +     + +   +L     +  S      +  
Sbjct: 77  QVPVQDFAHVRRGQLLAKIDDRIYAQHLEQAKAQLQTTQANLANWEQQRHSAEATIAEQR 136

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  +A     +      + L  +  VS+ D               R+     +    
Sbjct: 137 ATLSSNQAQRDRTRSAYARAQQLANQKLVSEQD---------------RDTAFAARAQAD 181

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                   A        + ++ +    +   A+  + + + +   +   IL+P  G +  
Sbjct: 182 AGVAQARAAVQAAEENARSVTVNRAALEAAVANAQAAVQLAQINLDNTRILAPRDGQLGQ 241

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP     ++ A     Q+ +V+ G  A+      A+ R   
Sbjct: 242 LGVR-QGAYVTNGTQLMALVP--DTLWVVANFKETQMANVRVGQRASFTVDALANAR--- 295

Query: 363 FKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
            +  +++I P        + +        +    + L+I+          LR G    V 
Sbjct: 296 LQGRVQEISPAAGSEFSVLRADNATGNFVKIAQRIPLRISVDPGQPQAARLRPGMSVVVA 355

Query: 415 FTAKNT 420
                 
Sbjct: 356 IDTAQR 361



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 50/145 (34%), Gaps = 7/145 (4%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L++IG+  ++    L P   +V  +   +    V  I    SG + +  V++ + + +G 
Sbjct: 31  LALIGVALVLYAWRLPPFTSAVERTENAMVHGQVTVIAPQVSGYVTQVPVQDFAHVRRGQ 90

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L   +D        +    ++  +  + T ++ L     +    E     +   L    
Sbjct: 91  LLAKIDD-------RIYAQHLEQAKAQLQTTQANLANWEQQRHSAEATIAEQRATLSSNQ 143

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMK 167
            +   T S        +  + +  +
Sbjct: 144 AQRDRTRSAYARAQQLANQKLVSEQ 168


>gi|289577477|ref|YP_003476104.1| efflux transporter RND family, MFP subunit [Thermoanaerobacter
           italicus Ab9]
 gi|289527190|gb|ADD01542.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           italicus Ab9]
          Length = 588

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 66/442 (14%), Positives = 142/442 (32%), Gaps = 76/442 (17%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I + V+ +G I N+  V+ +K   +G +KK   + G  + +G  L   E+      I+
Sbjct: 42  GNISMKVTGTGNITNDVRVITLK--GNGTVKKVYFKEGDTVKKGDLLYEIENESLKQQIE 99

Query: 98  LKK----VSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCS- 150
             K    ++ + L+  +++   ++    + +  D +  +   ++ Q +    +  +    
Sbjct: 100 EAKLNVDLAAQQLKSDLESYNKSIANLKITSPSDGIVDSILVQKGQNVSAGTQVATIADY 159

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL-----RALLSSHQKDLTMMKNL 205
                 +      +K      ++       L   +  +     +A+  +  +   +   L
Sbjct: 160 SHVTVRVPFNSVQIKNIKVGQKADIFLYDSLTTITGTVEYVSHQAVPHNTMEYYYVTVGL 219

Query: 206 FEKNAVS---QNDL-----NQQERIVYKSTLELREN---IHEQKNMLRHINELYDEANLE 254
               A+S   +  +     N  E+ +  STL ++     I +    +  IN    E N++
Sbjct: 220 DNPGALSDGMKVQVSIHTDNGVEKALEDSTLTVKNTVTVIAKTSGTVEKINVTEGE-NVK 278

Query: 255 FANYLKEIS------RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
               L E+S        ++ ++       +    L +  E   I SPI G IV       
Sbjct: 279 KGTLLVELSSDNISDTQIQNDKLALTQAQNNYNELLEQLENLKIYSPIDGKIVSQNI-EE 337

Query: 309 SNYAQQSQ----------PLMKIVPHSK--------------------LTYIRAKVTPKQ 338
            +    S             +  VP S                        +   V    
Sbjct: 338 GDVLGSSTSDSTTNGSQSSQLTFVPISDVSELSNYESEAETAVIVGNGNYTVNLSVDEAD 397

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I+++K G  A +      D+  K F   +  I  +             Y V +++     
Sbjct: 398 IKNIKVGQKAEI---TTDDLPGKTFTGTVTAISQL----PTVENGVSSYTVTIEL----- 445

Query: 399 SDNNIELRNGFPAEVLFTAKNT 420
            D+N +L  G    +       
Sbjct: 446 -DSNSDLMLGMSVNISIIVAEK 466


>gi|228999347|ref|ZP_04158926.1| multidrug resistance protein A [Bacillus mycoides Rock3-17]
 gi|229006901|ref|ZP_04164532.1| multidrug resistance protein A [Bacillus mycoides Rock1-4]
 gi|228754354|gb|EEM03768.1| multidrug resistance protein A [Bacillus mycoides Rock1-4]
 gi|228760292|gb|EEM09259.1| multidrug resistance protein A [Bacillus mycoides Rock3-17]
          Length = 211

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVYNQSFSSSNYA 312
           + A +  E+ +   +N     D++  +T+  +  EQ   +  P   T+V + + +++ + 
Sbjct: 51  KLAEWKAEVGKSYNEN-----DKLGAVTVSGQNGEQTIDVTIPKNATVVQSNA-TTNAFV 104

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+      +   ++ A +    I  V+KG    V    Y D         +E++  
Sbjct: 105 GAGSPIAYAYDMND-LWVTANIEETDIDSVQKGQEVDVYVDAYPDTT---LTGKVEQVGL 160

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 161 TTANTFSMLPSSNATANYTKVTQVVPVKVSLDHSKSVNIVPGMNVTVRIH 210


>gi|260576920|ref|ZP_05844902.1| polysaccharide export protein [Rhodobacter sp. SW2]
 gi|259020856|gb|EEW24170.1| polysaccharide export protein [Rhodobacter sp. SW2]
          Length = 412

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 76/208 (36%), Gaps = 5/208 (2%)

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL----NNKYDVLEKAFESREE 136
           G  L     +E    ++ +  +++ ++  ++ E S +D +     +    +E      + 
Sbjct: 139 GPALQALRSVEYASGLEQRLRTLQLVQARLNAENSFIDQVFSNKADGKVAVESLLVLPDA 198

Query: 137 QLLD-FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            + D  L    +T  ++          +    L ++      R  LE++++ L  +L+  
Sbjct: 199 VVRDPLLADLMTTERQILADWAERSQSAHAALLAQIEIQQDRRKALESRATSLDEVLALV 258

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++ L  ++ L +K   S++D+    +    +  E              + EL    +   
Sbjct: 259 RERLDAVRTLGDKGLASRDDVVTVTQAYANTVAEQLNVASALAETRSRLQELEQSLSRFG 318

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTIL 283
           A+    +  +L   Q   AD  S+L   
Sbjct: 319 ADLASGVDEELRAAQAELADVASRLDPA 346


>gi|26990901|ref|NP_746326.1| efflux transporter, RND family, MFP subunit [Pseudomonas putida
           KT2440]
 gi|24985916|gb|AAN69790.1|AE016615_6 ABC export system, membrane fusion protein [Pseudomonas putida
           KT2440]
          Length = 392

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 6/139 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE SV++ G +     V ++ +  SG I+   VE G Q+ +G  L+  +       +D
Sbjct: 45  ADIESSVTALGTLQPRRYV-DVGAQASGQIRNLHVEVGDQVHKGQLLVEIDPSTQQAKLD 103

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKV-- 152
             + SI NL+  +  +++ L     +      L     +REE L     + + T +++  
Sbjct: 104 AGRFSIDNLKAQLAEQRAQLKLAQQQLKRQRDLAAVGATREEDLQTAEAQLNVTQARIDM 163

Query: 153 FNYGISSVYRSLKMKLTRM 171
           +   I     SL+     +
Sbjct: 164 YQAQIRQANASLRSDEAEL 182



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 64/218 (29%), Gaps = 21/218 (9%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++ L+L +   +++  L  +    +E        L      ++  Q      
Sbjct: 112 LKAQLAEQRAQLKLAQQQLKRQRDLAAVGATREEDLQTAEAQLNVTQARIDMYQAQIRQA 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P+ GT+V   +          Q  PL+  +       + A+V
Sbjct: 172 NASLRSDEAELGYTRIFAPMDGTVVAVDAR-EGQTLNAQQQTPLILRIAKLSPMTVWAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-------- 386
           +   I  ++ G TA          R       +  I P    Q +               
Sbjct: 231 SEADIGKIQPGMTAYFTTLAGGKRRWTSTVRQVLPIPPKPLDQTSQGGGSPASATAGATG 290

Query: 387 -----YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                Y V+L +      + +  L      +V F    
Sbjct: 291 SQVVQYTVLLDVD-----NPDGALMAEMTTQVFFVVGQ 323


>gi|86133906|ref|ZP_01052488.1| efflux transporter, RND family, MFP subunit [Polaribacter sp.
           MED152]
 gi|85820769|gb|EAQ41916.1| efflux transporter, RND family, MFP subunit [Polaribacter sp.
           MED152]
          Length = 415

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 94/265 (35%), Gaps = 26/265 (9%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           + R+    +N   ++ + +L  A     Q+ L    +L ++    +N +      + ++ 
Sbjct: 93  VARLDPTGVNEQIIDARLNLETAQSKYTQQQLDTTLSLKQE----RNAIKDLSFSMEQTR 148

Query: 228 LELRENIHE----QKNMLRHINELYDEANLEFANYL---KEISRDLEQNQRTFADEMSKL 280
           LEL+++I+E     K +   + +   +   +  NY    ++ +  + +     +    +L
Sbjct: 149 LELKQSIYEPPATIKKLEIDLEKSERDLREKQENYRIKKRQANAKMVEVGTEVSKIRKEL 208

Query: 281 TILEKTREQKTILSPIAGTIVYNQS-----FSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             L +  +  TI S   G I Y ++         +      P +  +P       +    
Sbjct: 209 NDLLELLKSFTIYSDGNGMITYFKNWDGSKKKVGSTISPWNPTVASLPDLTKMESKTYAN 268

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              I+ +KKG    V F  + D+   +   I+      ++    N +  +   + +    
Sbjct: 269 EVDIRKIKKGLPVKVGFDAFPDV---EIPGIVT----DVANVGENKRGSD---IKVFQVM 318

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNT 420
           +  ++ N  +R G            
Sbjct: 319 IKLNETNDNIRPGMTTSNKILTFEK 343



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/139 (11%), Positives = 50/139 (35%), Gaps = 2/139 (1%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF-LNNKYDVLEK 129
            V  GS +  G  +   +     + I   +++++  +     ++      L  + + ++ 
Sbjct: 80  LVPEGSIVKVGDYVARLDPTGVNEQIIDARLNLETAQSKYTQQQLDTTLSLKQERNAIKD 139

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              S E+  L+     +   + +    I  + +S +    +  +  + +     K   + 
Sbjct: 140 LSFSMEQTRLELKQSIYEPPATIKKLEID-LEKSERDLREKQENYRIKKRQANAKMVEVG 198

Query: 190 ALLSSHQKDLTMMKNLFEK 208
             +S  +K+L  +  L + 
Sbjct: 199 TEVSKIRKELNDLLELLKS 217


>gi|115351687|ref|YP_773526.1| secretion protein HlyD family protein [Burkholderia ambifaria AMMD]
 gi|115281675|gb|ABI87192.1| secretion protein HlyD family protein [Burkholderia ambifaria AMMD]
          Length = 453

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 94/267 (35%), Gaps = 17/267 (6%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           + ++R +Y N   L N     RA L++ +  L   K  + +    + DL +   I ++  
Sbjct: 151 VRKVRGLYSNERGLANSIDGARAELAARRTALDKAKADYRR----REDLGRSGAISHEEL 206

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              R+ +   ++            + +       +      +        S+L      R
Sbjct: 207 AHARDTLTSAQSAYAAAQSALATLSEQHQTSKALVDDTAVASHPDVQAAASRLRAAYLAR 266

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +  I++P+ G +   ++           PL+ +VP  +  ++ A  T KQ+ H++ G  
Sbjct: 267 TRTDIVAPVTGYVAK-RTVQVGQRVSPGVPLLAVVPL-RELWVDANFTEKQLDHMRIGQP 324

Query: 348 ATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----EYYEVILKITDLAFS 399
             +    Y        + +++ +            N         +   V +++TD A  
Sbjct: 325 VELTADLYGSNVRYSGRVQSLGVGTGSAFSLLPAQNATGNWIKIVQRLPVRIELTDPAQL 384

Query: 400 DNNIELRNG--FPAEVLFTAKNTTLAQ 424
           D +  LR G    A V    ++ T+  
Sbjct: 385 DAH-PLRIGLSMHARVDQHDRSGTMLS 410


>gi|322614047|gb|EFY10983.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322617939|gb|EFY14832.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625447|gb|EFY22273.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322629912|gb|EFY26685.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322632199|gb|EFY28950.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636450|gb|EFY33157.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322643111|gb|EFY39685.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644694|gb|EFY41230.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322651284|gb|EFY47668.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322652803|gb|EFY49142.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322659105|gb|EFY55357.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322663193|gb|EFY59397.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668680|gb|EFY64833.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674516|gb|EFY70609.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322678278|gb|EFY74339.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682465|gb|EFY78486.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684178|gb|EFY80184.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323192266|gb|EFZ77498.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196307|gb|EFZ81459.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323201891|gb|EFZ86954.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323206434|gb|EFZ91395.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323212027|gb|EFZ96854.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216932|gb|EGA01655.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323220299|gb|EGA04753.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323224346|gb|EGA08635.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323228274|gb|EGA12405.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233458|gb|EGA17551.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323237080|gb|EGA21147.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323243705|gb|EGA27721.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323246053|gb|EGA30040.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323250829|gb|EGA34707.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323257675|gb|EGA41361.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323261884|gb|EGA45451.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267724|gb|EGA51206.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323268604|gb|EGA52071.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 355

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 19/300 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F  + E L     +            I     ++      +          ++  
Sbjct: 63  VSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSEMRAAQSVV 122

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L S  K     ++L ++ AVS   L+        +   L     +       I 
Sbjct: 123 KQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESARAALETAKAQVSAAKAAIE 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                 Q +   A    +  + +   +   + +P  G + Y + 
Sbjct: 183 AARTSIIQ-------------AQTRVEAAQATERRIVAD--IDDSELKAPRDGRVQY-RV 226

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +Q   +K G  A +      D+R     +
Sbjct: 227 AEPGEVLSAGGRVLNMVDLSD-VYMTFFLPTEQAGLLKIGGEARLVLDAAPDLRIPATIS 285

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            +  +     +  + ++ + +  + V  +I       +   ++ G P             
Sbjct: 286 FVASVAQFTPKTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLDERVPW 345


>gi|224825930|ref|ZP_03699034.1| secretion protein HlyD family protein [Lutiella nitroferrum 2002]
 gi|224602154|gb|EEG08333.1| secretion protein HlyD family protein [Lutiella nitroferrum 2002]
          Length = 386

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/356 (11%), Positives = 102/356 (28%), Gaps = 51/356 (14%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V+ G  +     L   +          +++  +  +     +++  D    + 
Sbjct: 59  GHLTEVLVKEGDLVSANQVLARMDT---------QELQAQLRQAQALVQQAREDARQTEA 109

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            VL+    +R  Q                                ++R         +  
Sbjct: 110 QVLQAEQAARRIQ-------------------------------AQVRQAQEAARRAQAT 138

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S   + L+  ++ L     L  K  VS   L+Q    +  +   L+            I
Sbjct: 139 VSQRDSELALSRQTLARSVELAAKGFVSSQKLDQDRATLQSAEAALQSARAGATEAEAAI 198

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                +     A         +   Q+  A   +++  ++   ++ T+ +PIAG ++Y +
Sbjct: 199 AATQAQHTEAEAGIAA-ARARVTSAQQAVAVAQARVEQMQVNLDENTLRTPIAGRVLY-R 256

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                        ++ ++  +   Y+   +  +Q   V  G  A +              
Sbjct: 257 LVEPGAVLAAGGKVLTVLDLTD-VYMTIFLPTEQAGRVTVGSDARIVLDAAPQY---VIP 312

Query: 365 AIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           A +  + P         +    + +  + V ++I           ++ G P     
Sbjct: 313 AKVSFVAPRSQFTPREVETRTEREKLMFRVKVRIAPALLQRFMERVKTGLPGVAYV 368


>gi|294675915|ref|YP_003576530.1| macrolide export ABC transporter macrolide-specific efflux protein
           MacA [Rhodobacter capsulatus SB 1003]
 gi|294474735|gb|ADE84123.1| macrolide export ABC transporter, macrolide-specific efflux protein
           MacA [Rhodobacter capsulatus SB 1003]
          Length = 390

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 85/263 (32%), Gaps = 26/263 (9%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS--QNDLNQQERIVYKSTLELRE 232
               + +  + S     L+    D     +L  +   S  + D+ + E  + +   ++R 
Sbjct: 56  AAQLVSVGAQVSGQLQTLAVALGDRVQKGDLIAQIDSSDQRADVARAEAALKQLQAQIRA 115

Query: 233 NIHEQKNMLRHINELY---------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                +     +             DE        L     +LE  +    +    L+  
Sbjct: 116 KEAAIRVAELSLTRQTTLNSKALSSDETRETAEATLDVAQAELEGLKAQLDEAQVTLSSS 175

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQH 341
           +    +  I +PI+GT+V             +     IV  +      ++A+++   +  
Sbjct: 176 QTELARTRISAPISGTVVAI-VSEEGTTLNANTSSPTIVKLAELDRMVVKAEISEADVVA 234

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDP----IISQQDNNLQTQEYYEVILKITDLA 397
           VK G  A            K F A +  ++P    I +    +     YY  +L +    
Sbjct: 235 VKPGQAAEFTL---NSSLTKAFSATLRALEPAPASIETSDTIDTDEAIYYNALLDV---- 287

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
            ++ +  LR G  AEV  T +  
Sbjct: 288 -ANPDGILRIGMSAEVTITLEAR 309



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 59/146 (40%), Gaps = 11/146 (7%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  +V +SG I     +V + +  SG ++   V  G ++ +G  +   +  +    + 
Sbjct: 42  ADLSKTVLASGTIEAA-QLVSVGAQVSGQLQTLAVALGDRVQKGDLIAQIDSSDQRADVA 100

Query: 98  LKKVSIKNLRCHIDTEKSAL----------DFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             + ++K L+  I  +++A+            LN+K    ++  E+ E  L     +   
Sbjct: 101 RAEAALKQLQAQIRAKEAAIRVAELSLTRQTTLNSKALSSDETRETAEATLDVAQAELEG 160

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRS 173
             +++    ++      ++  TR+ +
Sbjct: 161 LKAQLDEAQVTLSSSQTELARTRISA 186


>gi|288573579|ref|ZP_06391936.1| efflux transporter, RND family, MFP subunit [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569320|gb|EFC90877.1| efflux transporter, RND family, MFP subunit [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 387

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 76/204 (37%), Gaps = 17/204 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +  ++ +    +   +  E    +++ +  L   + LY E  +   N  ++ S  + + +
Sbjct: 118 IDSSEYSHLVAMKKAALSEGMAALNQGEADLERTSGLYREKVVSTQNMERQ-STSVSRLR 176

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  S+L   E+  ++  I +P  G +    S     Y     P++++        I
Sbjct: 177 ANCEVLKSQLKEAERKLKETHIRAPFDGVVTRVCS-EPGEYLTPGTPVVELANRDVELQI 235

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V    +  VKKG   T++   +  + EK+    +  +         + Q    + V 
Sbjct: 236 S--VPETMLGSVKKG--VTLKIN-FPMLGEKEISGKVLSVG----DALGDDQKGVLFPVK 286

Query: 391 LKITDLAFSDNNIELRNGFPAEVL 414
           + ++ + +      LR+G  AE +
Sbjct: 287 IGLSQVEW------LRSGMTAEAI 304


>gi|167627137|ref|YP_001677637.1| membrane fusion protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597138|gb|ABZ87136.1| membrane fusion protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 357

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 65/182 (35%), Gaps = 37/182 (20%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHI-------------NELYDEANLEFANYLKEI 262
           +++ E       L ++      KN   +I               +Y++A +E  NY +E+
Sbjct: 97  VSRLEEEKAAIELGIKSVKLAIKNTQNNIERHKYLVDKGASTQRIYEQAQMEMVNYTQEL 156

Query: 263 SR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA-QQSQPL 318
           S+   DL + +   A + S+L           + +P  G I+  +         + +  L
Sbjct: 157 SKLNVDLAKVKVQIARQQSRL-----------VKAPTDGVIMD-RIHGMGGVIVKDTDVL 204

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKI 370
             IVP SK   +   V    +  VK G            ++F  +  +    F+  +  I
Sbjct: 205 AVIVPESKSRIVELWVNSMDVPMVKVGDKVMLQFEGWPAIQFSGWPQVAIGTFEGEVIFI 264

Query: 371 DP 372
            P
Sbjct: 265 SP 266



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 69/178 (38%), Gaps = 8/178 (4%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVV 57
           M       + R  P S K++  L ++ II +     ++P + ++   G++      +   
Sbjct: 1   MMQLKSSEMLRKDP-SFKKIIFLVLLSIIVIGVVLGMIPWQQTIDGYGDVTTLSPSERQQ 59

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLKKVSIKNLRC-HIDTE 113
            I +P  G + K+ V  G  + +G P++     +    + L + K      ++   +  +
Sbjct: 60  NISAPIGGRLGKWYVFEGDAVKKGDPIVEVLDLDPEVVSRLEEEKAAIELGIKSVKLAIK 119

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +  +   +KY V + A   R  +        ++      N  ++ V   +  + +R+
Sbjct: 120 NTQNNIERHKYLVDKGASTQRIYEQAQMEMVNYTQELSKLNVDLAKVKVQIARQQSRL 177


>gi|158340792|ref|YP_001521960.1| RND family efflux transporter MFP subunit [Acaryochloris marina
           MBIC11017]
 gi|158311033|gb|ABW32646.1| efflux transporter, RND family, MFP subunit [Acaryochloris marina
           MBIC11017]
          Length = 429

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/372 (11%), Positives = 112/372 (30%), Gaps = 61/372 (16%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P++++V + G+     N   I +P +G + +  ++ G  +  G  +   + +  T  + 
Sbjct: 26  GPLQVTVDAEGKTRV-RNRFTIAAPVAGRLARIDLDPGDPVQSGAVVARIDPLPLTTKVK 84

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  ++ LR  +   ++            ++   +   Q    +    +   +      
Sbjct: 85  EAQARLQELRAQLAGVET------------QRPKSAALAQAQAQIRVAIAAKQQAEARLA 132

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            +     +    R R+  L     + +     A L++ Q+                    
Sbjct: 133 DAKAALAQATRDRKRAQDLEVAGAQTRKVREDAELAATQRQQ------------------ 174

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E    +    +      QK           +A  +  +YL E+       +   +   
Sbjct: 175 ELEVAQKQVQGAISTVAAAQKAF------SVLKAEQQDPDYLLEVY------RAQISSTE 222

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           S L  L     +  + +P+ G +      S+  +    +PL+++   ++   +   V   
Sbjct: 223 STLVNLADEARRTVVRAPVGGKVFRVLQESAR-FIPAGEPLLELG-DARQLELVIDVLST 280

Query: 338 QIQHVKKG-------------YTATVRF---PHYADIREKKFKAIIEKIDPIISQQDNNL 381
               VK G               A VR+     + ++     +     I         +L
Sbjct: 281 DAVKVKPGAFIQVDHWGGPHTLQAQVRYVEPSAFTEVSALGVEEQRVNIIADFIPPPRSL 340

Query: 382 QTQEYYEVILKI 393
                 E  + +
Sbjct: 341 GDGYRVEARIVV 352


>gi|254227818|ref|ZP_04921249.1| Multidrug resistance efflux pump [Vibrio sp. Ex25]
 gi|262395861|ref|YP_003287714.1| multidrug resistance efflux pump [Vibrio sp. Ex25]
 gi|151939860|gb|EDN58687.1| Multidrug resistance efflux pump [Vibrio sp. Ex25]
 gi|262339455|gb|ACY53249.1| multidrug resistance efflux pump [Vibrio sp. Ex25]
          Length = 407

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/386 (12%), Positives = 120/386 (31%), Gaps = 85/386 (22%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS--- 64
           N      A L  +  L  + +  +       P++    S G ++   ++     P S   
Sbjct: 23  NKATKSFAYLGGLGWLMFVWVGLI----NFTPMD---LSGGSVVQSPHIQL--RPDSTNV 73

Query: 65  -GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    ++   Q+ +G  +   +  +    ++   VS  + R  + T K  ++     
Sbjct: 74  KGKVDHIYIKPNQQVKEGQLIYELDPTQYEIALNQASVSADSARVALATAKGDIEIEEAN 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +  L +  E+ + QL      Y      +  Y          ++  R+    +   D++ 
Sbjct: 134 HQALVQDLETSKSQLEAAKVDYKFQKKMLDRY----------VEQNRVVQNTITESDIDK 183

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +SS +                      ++++++   E  + K  +++             
Sbjct: 184 QSSAVD---------------------MARHNVLTLESQIKKKQVDI-----------SR 211

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                 +A L       E+ +              ++   +       + +P  G +   
Sbjct: 212 AKLAIHKAELAVETKQAELRQA-----------EEQIAKAQWDLNSTKVHAPTDGFVTN- 259

Query: 304 QSFSSSNYAQQSQPLMKIVPH----SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
                    ++ Q +  ++P     +   Y+  +V  + I+++K G  A      ++   
Sbjct: 260 ------FILREGQRV-SMMPRINMYTNEKYVLMRVNHQAIRNIKPGQPAE-----FSSSV 307

Query: 360 EKK--FKAIIEKIDPIISQQDNNLQT 383
                F A +E I     +   NL  
Sbjct: 308 YPGKIFSATVEGIVEATGESQGNLLG 333


>gi|206578704|ref|YP_002238490.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|290509514|ref|ZP_06548885.1| multidrug resistance protein A [Klebsiella sp. 1_1_55]
 gi|206567762|gb|ACI09538.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|289778908|gb|EFD86905.1| multidrug resistance protein A [Klebsiella sp. 1_1_55]
          Length = 392

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 86/271 (31%), Gaps = 32/271 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + ++R +Y    +   + +  +  L + + D    + +    A++  D
Sbjct: 97  ALQQAEANLASTVRQVRGLYSTADNYRAQVAAKKVALQTAKSDYLRREKIVSSGAIAVED 156

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      V  +  +L       K     +++   + + E    +  + +    N      
Sbjct: 157 LAHYRDAVTSAQSDLLAAEQALKTNQAMVDDTVVDNHPEVKTAVATLRQRYLDN------ 210

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        + TI++P++G +   ++            L+ IVP ++  ++ A   
Sbjct: 211 ------------SRSTIVAPVSGYVAK-RAVQLGMRVTSGTTLLAIVPLNE-VWVDANFK 256

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQ-----E 385
             Q+Q ++ G    +    Y D    K+   IE +              N         +
Sbjct: 257 ESQMQDMRIGQKVELNADLYGDNV--KYHGTIESLGIGTGSAFSLLPAQNASGNWIKIVQ 314

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V + +       + + +     AEV   
Sbjct: 315 RLPVRITLDPHDMQKHPLRVGLSMNAEVDIR 345



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK------- 104
              N V +    +G + +  V+ G  + +G PL+  +  +T   +   + ++        
Sbjct: 54  VNGNQVTLTPQITGTVTQVTVDEGDYVEKGQPLVLLDPSDTAIALQQAEANLASTVRQVR 113

Query: 105 -------NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                  N R  +  +K AL    + Y   EK   S    + D L  Y    +   +  +
Sbjct: 114 GLYSTADNYRAQVAAKKVALQTAKSDYLRREKIVSSGAIAVED-LAHYRDAVTSAQSDLL 172

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           ++       +     ++  N  +++   + LR   
Sbjct: 173 AAEQALKTNQAMVDDTVVDNHPEVKTAVATLRQRY 207


>gi|168241740|ref|ZP_02666672.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194451194|ref|YP_002047612.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194409498|gb|ACF69717.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205338678|gb|EDZ25442.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 355

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 19/300 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F  + E L     +            I     ++      +          ++  
Sbjct: 63  VSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSEMRAAQSVV 122

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L S  K     ++L ++ AVS   L+        +   L     +       I 
Sbjct: 123 KQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESARAALETAKAQVSAAKAAIE 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                 Q +   A    +  + +   +   + +P  G + Y + 
Sbjct: 183 AARTSIIQ-------------AQTRVEAAQATERRIVAD--IDDSELKAPRDGRVQY-RV 226

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +Q   +K G  A +      D+R     +
Sbjct: 227 AEPGEVLSAGGRVLNMVDLSD-VYMTFFLPTEQAGLLKIGGEARLVLDAAPDLRIPATIS 285

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            +  +     +  + ++ + +  + V  +I       +   ++ G P             
Sbjct: 286 FVASVAQFTPKTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLDERVPW 345


>gi|156975680|ref|YP_001446587.1| hypothetical protein VIBHAR_03415 [Vibrio harveyi ATCC BAA-1116]
 gi|156527274|gb|ABU72360.1| hypothetical protein VIBHAR_03415 [Vibrio harveyi ATCC BAA-1116]
          Length = 371

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 91/247 (36%), Gaps = 23/247 (9%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                 ++L  +++  R      +    +++   +K       + Q + I      +L  
Sbjct: 64  QPTSKTIELYGRTAPNRQARLGAEVAGKIIRLDVQKG----QRVKQGQVIANIDERDLDI 119

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            +   K MLR + E   +A     N   +        Q    D  + L+ +E   +   +
Sbjct: 120 QLKRAKAMLR-VKEKEFKAAESLKNRGLQGEVAFATAQAALVDARANLSNVETALKNTKV 178

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G I+ ++     ++     P+  ++   +   I A V+ + IQ++K+G  A VR 
Sbjct: 179 RAPFDG-ILDHRFVEVGDFVGVGDPIATVI-DLEKLVIEADVSERHIQYLKQGQQADVR- 235

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                I     + +I  I  + S   N       + + ++I++   +     L  G  AE
Sbjct: 236 ----TIDNTHHQGVIRYIGRVSSTSTNT------FPIEIEISNDESA-----LPAGVSAE 280

Query: 413 VLFTAKN 419
           V+ +   
Sbjct: 281 VVLSLSE 287



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 4/100 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V+ G ++ QG  +   +       +D++    K +    + E  A + L N+ 
Sbjct: 90  GKIIRLDVQKGQRVKQGQVIANID----ERDLDIQLKRAKAMLRVKEKEFKAAESLKNRG 145

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
              E AF + +  L+D      +  + + N  + + +  +
Sbjct: 146 LQGEVAFATAQAALVDARANLSNVETALKNTKVRAPFDGI 185


>gi|58039250|ref|YP_191214.1| multidrug resistance protein A [Gluconobacter oxydans 621H]
 gi|58001664|gb|AAW60558.1| Multidrug resistance protein A [Gluconobacter oxydans 621H]
          Length = 368

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/318 (11%), Positives = 92/318 (28%), Gaps = 69/318 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               + I    +G + +  V +   +  G  L+  +  +    ++  + ++   + +ID 
Sbjct: 64  AGRKIAIAPHVNGYVTQLLVNDNQFVHAGDLLVRIDSRDYAASLNKAEAAVSQAKANIDA 123

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +  L   +  +                                   +  +         
Sbjct: 124 YQLMLAVAHKNFP--------------------------------GQLVTAQGNLAAAQA 151

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +     D   + S+ RA  ++ Q+D+   +   ++   ++  + Q +  + ++   ++E
Sbjct: 152 QLVKAEADYRRQRSVARA--ATSQQDIDYARAALDQ---AKARVLQAQGQLTQAEP-VKE 205

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           N+      +                            Q   A   + L       E   +
Sbjct: 206 NVANADARVSQ-------------------------EQAALAAANADLVQARLNLEWTEV 240

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G I         N+ Q  Q +  IV      ++ A     Q+ H++ G    +  
Sbjct: 241 RAPHDGWISQRNV-ERGNFVQTGQQMFSIV--EPEVWVVANYKETQLTHMRPGQKVDIEV 297

Query: 353 PHYADIREKKFKAIIEKI 370
             Y  +   +    ++ I
Sbjct: 298 DAYPQL---ELHGHVDSI 312


>gi|186686509|ref|YP_001869705.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186468961|gb|ACC84762.1| secretion protein HlyD family protein [Nostoc punctiforme PCC
           73102]
          Length = 443

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 55/388 (14%), Positives = 141/388 (36%), Gaps = 41/388 (10%)

Query: 13  HPASLKRMT--LLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            P S++ +      I+    L++WS   +  +++  +S + +    + +I++   G+I K
Sbjct: 31  EPKSVRSLASNAAMILISAALLSWSFRFMKAQLTTVNSVDAVMNGTLTDIRAQQEGVISK 90

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V+ G  I     L   E+  T+      ++  + +   ++ +++ L     +      
Sbjct: 91  VTVKTGQSINSEDLLFVIENQRTS------QLQAQEVSSRLNQQEAELRQAQERL----- 139

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              + +  LL+ + +      ++         + L   L   +S Y        ++ LL+
Sbjct: 140 ---AHKLSLLNIVNRDAVNQERLAVLENQQNQKQLLSDLEGAKSRYQLAELNYKRAKLLK 196

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           +  +  +               ++ +L Q+E  V     +L      Q  +   ++    
Sbjct: 197 SEGAIAEASFD----------AAEIELKQRESEVESLQAKLAALQVNQDAVRNGLSLSRT 246

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ----------KTILSPIAGT 299
            +N + +  L E+   + ++Q+        +   +   +Q           TI SP +G 
Sbjct: 247 RSNYDPSIRLVELQLQIAEDQQGIETLKKTIQGTKAEFDQAKKDLQHKQVVTIKSPESGV 306

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF--PHYAD 357
           +    +     + QQ   L +I   ++  ++ A V  +++Q ++ G  A ++      + 
Sbjct: 307 MWRLTA-QLGKFVQQGDSLGQIAACNQR-WVDAWVDEQKVQLLQVGTPAEIKLNGTGSSV 364

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQE 385
               K   I   I  + + +D  +    
Sbjct: 365 TLTGKISVIRSGIGRLSAGEDTVVAMMP 392


>gi|294678900|ref|YP_003579515.1| multidrug resistance protein A [Rhodobacter capsulatus SB 1003]
 gi|294477720|gb|ADE87108.1| multidrug resistance protein A [Rhodobacter capsulatus SB 1003]
          Length = 360

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 74/251 (29%), Gaps = 12/251 (4%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + + LRA  +  Q    + ++  +  A               +   L    H+  + L  
Sbjct: 103 QVAQLRAAYNLAQAQEQVAQDTADYLASELKRQEAITGRGAGTESALDAARHDASSALES 162

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +           A    +   +      T    ++             + +P  G +   
Sbjct: 163 LAAAKQGVAAALAALGGDPKVE-TDTHPTVMAALTARDKAAYNLGLTEVKAPADGVVYKA 221

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            SF    +      L  +V      +I A     QI  +  G  A V F  +     K+F
Sbjct: 222 DSFKPGQFVAAGAALFSLVETGDT-WIEANFKETQIGKMAPGQKAEVEFDTFP---GKEF 277

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE-------LRNGFPAEVLFT 416
           +A++E +      + + L  Q      +K+T        +        LR G  A V   
Sbjct: 278 EAVVEAVGAGTGAEFSLLPAQNATGNWVKVTQRVPVTLRLTGTTDLPALRTGLSAAVTVD 337

Query: 417 AKNTTLAQEII 427
            +  T    ++
Sbjct: 338 TRAKTNLDALV 348



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 56/160 (35%), Gaps = 9/160 (5%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            +  P  L   +L  ++ + G   W      E + ++      +   + + S  SG + +
Sbjct: 8   PKKSPKKLLMASLPVVLVLAGGWVWLDSGRYESTENA----AVQQARISVASDISGRVTE 63

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V++  ++  G PL   +       +     ++   R  +   ++A +    +  V + 
Sbjct: 64  VFVKDNDRVTSGQPLFRVDPEPYRIALAQADAALAQARLQVAQLRAAYNLAQAQEQVAQD 123

Query: 130 -----AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                A E + ++ +   G    +      +  SS   SL
Sbjct: 124 TADYLASELKRQEAITGRGAGTESALDAARHDASSALESL 163


>gi|283797427|ref|ZP_06346580.1| auxiliary transport protein, membrane fusion protein [Clostridium
           sp. M62/1]
 gi|291074785|gb|EFE12149.1| auxiliary transport protein, membrane fusion protein [Clostridium
           sp. M62/1]
          Length = 499

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 107/309 (34%), Gaps = 17/309 (5%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +       + DV+     +      D      +  ++V    +    R  K ++  +   
Sbjct: 125 AVASMPLERGDVVSTLSLTGPISGTDSADVVSNLHAEVLEIRVKEGDRVEKGQVLAVLDR 184

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              + +++   +     +S + +++   +N +EK   +  D N  +    ++ + L E+ 
Sbjct: 185 TDAQKEVDIAQNSYELAVSEYNENIRDTRNGYEK---AVQDYNTAKLNYDRNKV-LFESG 240

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK--LTILEKTREQKTI 292
                    ++   ++A  E  +Y  E  + +         + ++  L   +K  E+  +
Sbjct: 241 AVSSAEFEAVSNGLNDARREMESYTVENGQAVPDKSYELKVQSAQFELDQKKKDLEETEV 300

Query: 293 LSPIAGTIVYNQSFSSSNYA--QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            SPIAGT+V   S     +A   + +  M IV +     +  +V+   +  +  G    +
Sbjct: 301 ESPIAGTVVRVNS-KVGQFADKPEDEKPMFIVENLDQLEMELQVSEYSVGDISVGLPVEI 359

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
                  +  +  K  +  I P   ++  +  T+      +  T +   D    L  G  
Sbjct: 360 --TA-DILDGRTVKGTVSSISPTGEEKVGSGSTE-----RVVPTTVTIDDPKSGLIAGIT 411

Query: 411 AEVLFTAKN 419
           A      + 
Sbjct: 412 ARATVVTER 420



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 49/144 (34%), Gaps = 13/144 (9%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + + +V+ G ++ +G  L   +  +    +D+ + S +      +      + + +  + 
Sbjct: 162 VLEIRVKEGDRVEKGQVLAVLDRTDAQKEVDIAQNSYELAVSEYN------ENIRDTRNG 215

Query: 127 LEKAFESREEQLLDF-LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD----- 180
            EKA +      L++   K       V +    +V   L      M S  +         
Sbjct: 216 YEKAVQDYNTAKLNYDRNKVLFESGAVSSAEFEAVSNGLNDARREMESYTVENGQAVPDK 275

Query: 181 -LENKSSLLRALLSSHQKDLTMMK 203
             E K    +  L   +KDL   +
Sbjct: 276 SYELKVQSAQFELDQKKKDLEETE 299


>gi|254489137|ref|ZP_05102341.1| multidrug resistAnce protein a [Roseobacter sp. GAI101]
 gi|214042145|gb|EEB82784.1| multidrug resistAnce protein a [Roseobacter sp. GAI101]
          Length = 392

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 81/267 (30%), Gaps = 18/267 (6%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           ++ L   +S      D   +     A   +       M+ + + +  +      + + + 
Sbjct: 111 RIALETAQSRVATAADTLARIDAQIAAAQAGVAQAQAMEQMAQAHLNAAQTTADRTQKLA 170

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI---SRDLEQNQRTFADEMSKLT 281
            S +  +  +      L+        A     N   ++        + +    +      
Sbjct: 171 SSKVAAQAQVDTAIEDLQTTQASVASAKAAVLNAQAQVGVLRAQYAEAKGAQRELELAAD 230

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
             ++  +   + +P  GT+         +       L  +VP +   Y+ A     Q+  
Sbjct: 231 QAQRDLDLTVLRAPADGTLANLTL-EVGDLVNPGTRLAALVPLNG-LYVEANFKETQMDG 288

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDP----IISQQDNNLQTQEYYEVILKIT-DL 396
           V  G    + F        + F+  +  + P    I S    +  T  + +V+ ++   +
Sbjct: 289 VAVGAEVHMSFDA---APGQDFEGEVASVSPATGSIFSLLPADNATGNFTKVVQRVPVRI 345

Query: 397 AFSDNNIE---LRNGF--PAEVLFTAK 418
           A   + ++   LR G     EV     
Sbjct: 346 AIPQDALDAGFLRAGLSVTVEVDSRTG 372



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 92/313 (29%), Gaps = 23/313 (7%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RC 108
              NV  I S   G +    V   + +  G  L+  +D +    ++  +  +        
Sbjct: 70  VTANVTLISSRVQGYVADMPVAENADVKAGDVLVRLDDGDYRIALETAQSRVATAADTLA 129

Query: 109 HIDTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            ID + +A      +   +E+  ++     Q      +  ++        + +    L+ 
Sbjct: 130 RIDAQIAAAQAGVAQAQAMEQMAQAHLNAAQTTADRTQKLASSKVAAQAQVDTAIEDLQT 189

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
               + S     L+ + +  +LRA  +  +     ++ L    A    DL         +
Sbjct: 190 TQASVASAKAAVLNAQAQVGVLRAQYAEAKGAQRELE-LAADQAQRDLDLTVLRAPADGT 248

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L   + +  N    +  L     L      KE   D                  +  
Sbjct: 249 LANLTLEVGDLVNPGTRLAALVPLNGLYVEANFKETQMDGVAVGAEVHMSFDAAPGQDFE 308

Query: 287 REQKTILSPIAGTIVYN--QSFSSSN---YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
            E  ++ SP  G+I        ++ N     Q+  P+   +P   L              
Sbjct: 309 GEVASV-SPATGSIFSLLPADNATGNFTKVVQR-VPVRIAIPQDAL----------DAGF 356

Query: 342 VKKGYTATVRFPH 354
           ++ G + TV    
Sbjct: 357 LRAGLSVTVEVDS 369


>gi|313497944|gb|ADR59310.1| Efflux transporter, RND family, MFP subunit [Pseudomonas putida
           BIRD-1]
          Length = 392

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 6/139 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE SV++ G +     V ++ +  SG I+   VE G Q+ +G  L+  +       +D
Sbjct: 45  ADIESSVTALGTLQPRRYV-DVGAQASGQIRNLHVEVGDQVHKGQLLVEIDPSTQQAKLD 103

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKV-- 152
             + SI NL+  +  +++ L     +      L     +REE L     + + T +++  
Sbjct: 104 AGRFSIDNLKAQLAEQRAQLKLAQQQLKRQRDLAAVGATREEDLQTAEAQLNVTQARIDM 163

Query: 153 FNYGISSVYRSLKMKLTRM 171
           +   I     SL+     +
Sbjct: 164 YQAQIRQANASLRSDEAEL 182



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 64/218 (29%), Gaps = 21/218 (9%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++ L+L +   +++  L  +    +E        L      ++  Q      
Sbjct: 112 LKAQLAEQRAQLKLAQQQLKRQRDLAAVGATREEDLQTAEAQLNVTQARIDMYQAQIRQA 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L   E       I +P+ GT+V   +          Q  PL+  +       + A+V
Sbjct: 172 NASLRSDEAELGYTRIFAPMDGTVVAVDAR-EGQTLNAQQQTPLILRIAKLSPMTVWAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-------- 386
           +   I  ++ G TA          R       +  I P    Q +               
Sbjct: 231 SEADIGKIQPGMTAYFTTLAGGKRRWTSTVRQVLPIPPKPLDQTSQGGGSPASATAGATG 290

Query: 387 -----YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                Y V+L +      + +  L      +V F    
Sbjct: 291 SQVVQYTVLLDVD-----NPDGALMAEMTTQVFFVVGQ 323


>gi|170722697|ref|YP_001750385.1| RND family efflux transporter MFP subunit [Pseudomonas putida W619]
 gi|169760700|gb|ACA74016.1| efflux transporter, RND family, MFP subunit [Pseudomonas putida
           W619]
          Length = 409

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 53/142 (37%), Gaps = 3/142 (2%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               IE SV++ G +     V ++ +  SG I+K  VE G Q+  G  L+  +       
Sbjct: 60  ARADIESSVTALGTLQPRRYV-DVGAQASGQIRKLHVEAGDQVHTGQLLVEIDPSTQQAR 118

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +D  + SI NL+  +  +++       +Y    +   +   +  D          KV   
Sbjct: 119 LDAGRFSIDNLKAQLAEQRAQYLLATQQYRRQRELAGAGATREEDLQAA--DAQLKVTQA 176

Query: 156 GISSVYRSLKMKLTRMRSIYLN 177
            I  +   ++     +RS    
Sbjct: 177 RIDMIQAQIRQAQANLRSDEAE 198



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 88/334 (26%), Gaps = 59/334 (17%)

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                   +     +  + +     Q    + K H       + G   V      +  R+
Sbjct: 60  ARADIESSVTALGTLQPRRYVDVGAQASGQIRKLHVEAGDQVHTGQLLVEIDPSTQQARL 119

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +   +  +L+ + +  RA      +     + L    A  + DL              +
Sbjct: 120 DAGRFSIDNLKAQLAEQRAQYLLATQQYRRQRELAGAGATREEDL--------------Q 165

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               + K     I+ +  +     AN   +                      E       
Sbjct: 166 AADAQLKVTQARIDMIQAQIRQAQANLRSD----------------------EAELGYTR 203

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           I +P+ GT+V   +          Q  PL+  +       + A+V+   I  VK G TA 
Sbjct: 204 IYAPMDGTVVAVDAR-EGQTLNAQQQTPLILRIAKLSPMTVWAQVSEADIGKVKPGMTAY 262

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-------------YEVILKITDL 396
                    R       I  I P      +                    Y V+L +   
Sbjct: 263 FTTLAGGKRRWNSTVRQILPIPPKPLAHTSQGGGGPASAIAGTTGSQVVQYTVLLDVD-- 320

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              + +  L      +V F A     +Q +  P+
Sbjct: 321 ---NPDGALMADMTTQVFFVAGQ--ASQVLTAPL 349


>gi|241667699|ref|ZP_04755277.1| membrane fusion protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 357

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 65/182 (35%), Gaps = 37/182 (20%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHI-------------NELYDEANLEFANYLKEI 262
           +++ E       L ++      KN   +I               +Y++A +E  NY +E+
Sbjct: 97  VSRLEEEKAAIELGIKSVKLAIKNTQNNIERHKYLVDKGASTQRIYEQAQMEMVNYTQEL 156

Query: 263 SR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA-QQSQPL 318
           S+   DL + +   A + S+L           + +P  G I+  +         + +  L
Sbjct: 157 SKLNVDLAKVKVQIARQQSRL-----------VKAPTDGVIMD-RIHGMGGVIVKDTDVL 204

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKI 370
             IVP SK   +   V    +  VK G            ++F  +  +    F+  +  I
Sbjct: 205 AVIVPESKSRIVELWVNSMDVPMVKVGDKVMLQFEGWPAIQFSGWPQVAIGTFEGEVIFI 264

Query: 371 DP 372
            P
Sbjct: 265 SP 266



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 69/178 (38%), Gaps = 8/178 (4%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVV 57
           M       + R  P S K++  L ++ II +     ++P + ++   G++      +   
Sbjct: 1   MMQLKSSEMLRKDP-SFKKIIFLVLLSIIVIGVVLGMIPWQQTIDGYGDVTTLSPSERQQ 59

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLKKVSIKNLRC-HIDTE 113
            I +P  G + K+ V  G  + +G P++     +    + L + K      ++   +  +
Sbjct: 60  NISAPIGGRLGKWYVFEGDAVKKGDPIVEVLDLDPEVVSRLEEEKAAIELGIKSVKLAIK 119

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +  +   +KY V + A   R  +        ++      N  ++ V   +  + +R+
Sbjct: 120 NTQNNIERHKYLVDKGASTQRIYEQAQMEMVNYTQELSKLNVDLAKVKVQIARQQSRL 177


>gi|159044448|ref|YP_001533242.1| hypothetical protein Dshi_1899 [Dinoroseobacter shibae DFL 12]
 gi|157912208|gb|ABV93641.1| hypothetical protein Dshi_1899 [Dinoroseobacter shibae DFL 12]
          Length = 468

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/213 (11%), Positives = 73/213 (34%), Gaps = 12/213 (5%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSI-----LLPIEISVSSSGEILNEDNVVEIK 60
            + ++   P +L+ +  +   G+IGL+ + +        +         ++ E  +V   
Sbjct: 123 TEAVRGTTPRALRAVWNVLFYGVIGLLVFGVLGQQIWARLSSIDVGQARVVAE--LVVHP 180

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P    + + +V+ G ++ QG  L+         ++   +  ++         ++AL   
Sbjct: 181 APTGAYVDEIRVKPGDRVRQGQTLVVLSSPGHKAVLTDIRADLRLAEARASRTRAALALH 240

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                   +  E    + +               Y + +V ++L         +     D
Sbjct: 241 AEGKADARRPLEEALARAIAARRPADFLGG----YDLRAVRQALHGLQMFDAGVSQAPDD 296

Query: 181 LENKSSLLRALLSSHQKDLTMM-KNLFEKNAVS 212
              + + L   L   + ++  + + L  + +++
Sbjct: 297 FHGQHAYLMETLRDQKSEIAALKRALSAEKSIA 329



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 34/296 (11%), Positives = 85/296 (28%), Gaps = 10/296 (3%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           + L  ++     +             ++ +           G + V  S       +  I
Sbjct: 160 ARLSSIDVGQARVVAELVVHPAPTGAYVDEIRVKPGDRVRQGQTLVVLSSPGHKAVLTDI 219

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
             +    E ++S  RA L+ H +     +   E+         +    +    L     +
Sbjct: 220 RADLRLAEARASRTRAALALHAEGKADARRPLEEALARAIAARRPADFLGGYDL---RAV 276

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            +  + L+  +    +A  +F      +   L   +   A     L+  +       I++
Sbjct: 277 RQALHGLQMFDAGVSQAPDDFHGQHAYLMETLRDQKSEIAALKRALSAEKSIAGAADIVA 336

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
              G +     F    +  +    +  V      ++   +       V  G  A  R   
Sbjct: 337 MADGVVNEMAIF-EDQFLSRGDVAVT-VEAEGPRHVVGWLDEAMAAAVYPGMGA--RMVA 392

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
            +  + ++ +  ++++  +               V++   D   S+    LR G P
Sbjct: 393 ISGGQTRQIRGTVQEVVAMAHPDRGGAFGL---RVLVLPADWVASEAPELLRPGAP 445


>gi|167762480|ref|ZP_02434607.1| hypothetical protein BACSTE_00835 [Bacteroides stercoris ATCC
           43183]
 gi|167699586|gb|EDS16165.1| hypothetical protein BACSTE_00835 [Bacteroides stercoris ATCC
           43183]
          Length = 411

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 69/217 (31%), Gaps = 9/217 (4%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDL 266
             +++ D    +  V            E +   ++        E  L      ++   + 
Sbjct: 86  QLIAEMDRVTLQSEVASQRAAYNGAKAEYEYQRKNYERNRGLHEKQLISDTDYEQSVYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ + ++    + L   E+     TI SPI G +V N++               L  I  
Sbjct: 146 EKAKSSYESSQASLAKAERNLSYATITSPIDG-VVINRAVEEGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 + A V    I  VK G   T     Y +     F+ ++ +I        ++  +
Sbjct: 205 DLTQMQVVADVDEADIGGVKDGQRVTFSVDAYPNDT---FEGVVTQIRLGEDSSTSSGSS 261

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                V+     ++  + +++L+    A V     + 
Sbjct: 262 GTSGTVVTYEVVISAPNPDLKLKPRLTANVTIYTLDR 298



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 56/148 (37%), Gaps = 1/148 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  S++++G I     V E+ +  SGII K   +  S + +G  +   + +     + 
Sbjct: 43  GEISESITATGTIEPVTEV-EVGTQVSGIIDKIYADYNSVVTKGQLIAEMDRVTLQSEVA 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            ++ +    +   + ++   +     ++    +    E+ + ++     S  S   +   
Sbjct: 102 SQRAAYNGAKAEYEYQRKNYERNRGLHEKQLISDTDYEQSVYNYEKAKSSYESSQASLAK 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +    S     + +  + +NR   E ++
Sbjct: 162 AERNLSYATITSPIDGVVINRAVEEGQT 189


>gi|88706768|ref|ZP_01104469.1| efflux membrane fusion protein [Congregibacter litoralis KT71]
 gi|88698949|gb|EAQ96067.1| efflux membrane fusion protein [Congregibacter litoralis KT71]
          Length = 347

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 63/171 (36%), Gaps = 11/171 (6%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +  Q ER    + L   E   E   + +   E   +  L      ++    +EQ +   A
Sbjct: 107 ERLQAERGQVLAKLTAAETALEIAQIDKRRMEKLFDEGLSARREFEQARIRVEQLRADVA 166

Query: 275 DEMSKLTILEKTREQKTI---LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
              ++L+ ++    ++++    +P  GTI+   +  ++ +    Q +   VP +    I 
Sbjct: 167 QAGAELSRVDVNLSRQSVQIVRAPRDGTILRVNAGDAATFISAGQVVATFVPDNAERAIE 226

Query: 332 AKVTPKQIQHVKKGYTATVRF--------PHYADIREKKFKAIIEKIDPII 374
             +  + I  V++G    ++F          +  +    F   +  IDP  
Sbjct: 227 MFIDGRDIALVREGARVRIQFEGWPVIQISGWPSVAVGTFSGHVIAIDPTA 277



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 62/169 (36%), Gaps = 4/169 (2%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKF 70
           P   + + +  +   + +  +   +P   + S  G +      D + EI +   G I+++
Sbjct: 22  PRVARAVGIGLLFFFVVVGLFLTFVPWVQTASGPGNVTALNPNDRMQEINALVPGRIQEW 81

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V +GS++  G P++   D +   L++  +     +   +   ++AL+        +EK 
Sbjct: 82  YVRDGSRVKVGDPIVRIVDNDPQ-LLERLQAERGQVLAKLTAAETALEIAQIDKRRMEKL 140

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           F+       +F            +   +    S        +S+ + R 
Sbjct: 141 FDEGLSARREFEQARIRVEQLRADVAQAGAELSRVDVNLSRQSVQIVRA 189


>gi|260062293|ref|YP_003195373.1| hypothetical protein RB2501_11887 [Robiginitalea biformata
           HTCC2501]
 gi|88783855|gb|EAR15026.1| hypothetical protein RB2501_11887 [Robiginitalea biformata
           HTCC2501]
          Length = 338

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 102/381 (26%), Gaps = 103/381 (27%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV +S  +  +     + +  SGI++K  V  G  +  GTPLL   D          
Sbjct: 8   ITESVYASATVQPDSMYK-VHAAVSGILEKNLVREGDLVQTGTPLLKITD-------RSP 59

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++S +N R  ++   S           L    E+     +D    +     K+++  I S
Sbjct: 60  ELSRENARLQMELAASNYQGSTTPLRDLASRIETARLAYIDDSVNFR-RQEKLWSQQIGS 118

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                  KL   RS                                       +N L+Q 
Sbjct: 119 RATFENRKLAYERS---------------------------------------RNQLDQL 139

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +    +   ELR  + + +N  R      DE                             
Sbjct: 140 QTEYARLERELRTKMEQARNSYRSYQANADEF---------------------------- 171

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                      T+ S I G +              ++PL  +        +   V    I
Sbjct: 172 -----------TVRSFIDGKVYAL-FKEPGELVVPNEPLATLG-KPDSFVVELLVDEVDI 218

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             ++ G    V    Y D     F+A + +I P    ++              + +  F 
Sbjct: 219 VRLRTGQEVLVSLDAYPDE---VFRAGLTRIYPQKDSRNQTF-----------LAEARFK 264

Query: 400 DNNIELRNGFPAEVLFTAKNT 420
               +L  G   E        
Sbjct: 265 APPNQLYPGLSGEANIVIDRR 285


>gi|254704351|ref|ZP_05166179.1| HlyD family protein secretion protein [Brucella suis bv. 3 str.
           686]
 gi|254710141|ref|ZP_05171952.1| HlyD family protein secretion protein [Brucella pinnipedialis
           B2/94]
 gi|256031636|ref|ZP_05445250.1| HlyD family protein secretion protein [Brucella pinnipedialis
           M292/94/1]
 gi|256159780|ref|ZP_05457523.1| HlyD family protein secretion protein [Brucella ceti M490/95/1]
 gi|256255038|ref|ZP_05460574.1| HlyD family protein secretion protein [Brucella ceti B1/94]
          Length = 347

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 68  LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFNRVSA 127

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 128 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 183

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 184 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFLAVGDPAFTLI-- 230

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 231 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITP 275



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/231 (9%), Positives = 66/231 (28%), Gaps = 24/231 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIKSPFSGIIKKF 70
            + + ++  +  I +  W             G+ ++ED+       V I    SG + + 
Sbjct: 3   RRILLIVGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAITPQVSGQVIRV 54

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V     + +G  L   +       +D  K ++      +    + L     +       
Sbjct: 55  AVGPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKL----AGLVLTYKQQLASVAQ 110

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +       +   +  +     F            +++ +              + L   
Sbjct: 111 AKDDVTFAQEQFNRVSALVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGT 170

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           L    Q+  +    L  K   ++ +L ++   + +        + + +N+ 
Sbjct: 171 LDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPFAGTVTQVENIQ 215


>gi|221211919|ref|ZP_03584897.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD1]
 gi|221168004|gb|EEE00473.1| secretion protein HlyD family protein [Burkholderia multivorans
           CGD1]
          Length = 549

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/413 (10%), Positives = 112/413 (27%), Gaps = 80/413 (19%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  +  ++++ ++G + W          +       + N + +    SG +
Sbjct: 203 ERKRPGRKPLIILGAIALLIVVGGLVW-WFATRNQESTDDAY--TDGNAIAVAPHVSGYV 259

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V++   + +G  L+  +  +    +D     +      +D  +  LD    +Y   
Sbjct: 260 TRLAVDDNVYVHRGDVLVEIDPRDYRAQVDAAHAQLGLAEAQLDAARVQLDIARVQYPAQ 319

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +   ++ E       +  +  ++     + +  +         R+     + +    + 
Sbjct: 320 YRQARAQIESAEAAYRQALAAQARQRAVDVRATSQQAIDAADAQRASADANVAMAQAQAR 379

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             +L+                                       + I + + ++    + 
Sbjct: 380 TASLVP--------------------------------------QQIRQAETVVEERRQQ 401

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +A  +                             E      T+ +P  G +       
Sbjct: 402 VLQARAQLEQ-------------------------AELNLAYCTMRAPSDGWVTRRNV-Q 435

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             ++ Q    +  IV  +   +I A     Q++ ++ G    V    Y D+        +
Sbjct: 436 LGSFLQPGTSIFSIV--TPRVWITANFKESQLKRMRVGDRVDVSVDAYPDL---DLHGHV 490

Query: 368 EKI--------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           + I            ++       +    V +KI        N  L  G   E
Sbjct: 491 DSIQLGSGSRFSAFPAENATGNFVKIVQRVPVKIVLDGPLPRNPPLGLGLSVE 543


>gi|298230489|ref|ZP_06964170.1| transport protein ComB [Streptococcus pneumoniae str. Canada
           MDR_19F]
          Length = 449

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 49/439 (11%), Positives = 144/439 (32%), Gaps = 35/439 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R H  S   +  ++++ +  L+ ++ +   E+S+S+   +     +  I+S  +  I  
Sbjct: 14  RRYHNFSSSVIVPMALLLVF-LLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILV 72

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
              E    + +G  L+ +++       +     +  L+      K  L++L       E 
Sbjct: 73  NHSEENKLVKKGDLLVQYQEGAEGVQAESYASQLDMLKDQ----KKQLEYLQKSLQEGEN 128

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            F   ++       + + + +       S    ++  +            +L +++    
Sbjct: 129 HFPEEDKFGYQATFRDYISQAGSLRASTSQQNETIASQNAAASQTQAEIGNLISQTEAKI 188

Query: 190 ALLSSHQKDLTMMKNLFEKNAV--------SQND---------LNQQERIVYKSTLELRE 232
               + +  +    +L  +N          SQ +         + Q E  + +    L  
Sbjct: 189 RDYQTAKSAIETGASLAGQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQISQLESSLAT 248

Query: 233 NIHEQKN---MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              +         + + L  +     + +L ++ ++L    +   +  S   +     ++
Sbjct: 249 YRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDK 308

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGY 346
             + +   G +  N   S S+   +   L ++ P         + A ++ K +  +K G 
Sbjct: 309 GKVTASEDGVLHLNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKYVARIKVGD 368

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           +       +    +    + I  ID   ++ +       ++++  +      S+   +LR
Sbjct: 369 SVRYT-TTHDAGNQLFLDSTITSIDATATKTEKG----NFFKIEAETN--LTSEQAEKLR 421

Query: 407 NGFPAEVLFTAKNTTLAQE 425
            G    +       +  + 
Sbjct: 422 YGVEGRLQMITGKKSYLRY 440


>gi|254876243|ref|ZP_05248953.1| secretion protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254842264|gb|EET20678.1| secretion protein [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
          Length = 356

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 65/182 (35%), Gaps = 37/182 (20%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHI-------------NELYDEANLEFANYLKEI 262
           +++ E       L ++      KN   +I               +Y++A +E  NY +E+
Sbjct: 96  VSRLEEEKAAIELGIKSVKLAIKNTQNNIERHKYLVDKGASTQRIYEQAQMEMVNYTQEL 155

Query: 263 SR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA-QQSQPL 318
           S+   DL + +   A + S+L           + +P  G I+  +         + +  L
Sbjct: 156 SKLNVDLAKVKVQIARQQSRL-----------VKAPTDGVIMD-RIHGMGGVIVKDTDVL 203

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKI 370
             IVP SK   +   V    +  VK G            ++F  +  +    F+  +  I
Sbjct: 204 AVIVPESKSRIVELWVNSMDVPMVKVGDKVMLQFEGWPAIQFSGWPQVAIGTFEGEVIFI 263

Query: 371 DP 372
            P
Sbjct: 264 SP 265



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 68/176 (38%), Gaps = 8/176 (4%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEI 59
                 + R  P S K++  L ++ II +     ++P + ++   G++      +    I
Sbjct: 2   QLKSSEMLRKDP-SFKKIIFLVLLSIIVIGVVLGMIPWQQTIDGYGDVTTLSPSERQQNI 60

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLKKVSIKNLRC-HIDTEKS 115
            +P  G + K+ V  G  + +G P++     +    + L + K      ++   +  + +
Sbjct: 61  SAPIGGRLGKWYVFEGDAVKKGDPIVEVLDLDPEVVSRLEEEKAAIELGIKSVKLAIKNT 120

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +   +KY V + A   R  +        ++      N  ++ V   +  + +R+
Sbjct: 121 QNNIERHKYLVDKGASTQRIYEQAQMEMVNYTQELSKLNVDLAKVKVQIARQQSRL 176


>gi|16766873|ref|NP_462488.1| hypothetical protein STM3587 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161616636|ref|YP_001590601.1| hypothetical protein SPAB_04453 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167549194|ref|ZP_02342953.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|167990804|ref|ZP_02571903.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168235182|ref|ZP_02660240.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168260683|ref|ZP_02682656.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|168465131|ref|ZP_02699023.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|194443085|ref|YP_002042832.1| auxiliary transport protein membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194737089|ref|YP_002116522.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197264667|ref|ZP_03164741.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|200389048|ref|ZP_03215660.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204928726|ref|ZP_03219925.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205354795|ref|YP_002228596.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207858825|ref|YP_002245476.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238910412|ref|ZP_04654249.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|16422148|gb|AAL22447.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161366000|gb|ABX69768.1| hypothetical protein SPAB_04453 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401748|gb|ACF61970.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194712591|gb|ACF91812.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195632234|gb|EDX50718.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|197242922|gb|EDY25542.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197291334|gb|EDY30686.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|199606146|gb|EDZ04691.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204322159|gb|EDZ07357.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205274576|emb|CAR39626.1| putative HlyD family secretion protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205325632|gb|EDZ13471.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205330663|gb|EDZ17427.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205350484|gb|EDZ37115.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Hadar str.
           RI_05P066]
 gi|206710628|emb|CAR34986.1| putative HlyD family secretion protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|261248740|emb|CBG26583.1| putative HlyD family secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267995818|gb|ACY90703.1| hypothetical protein STM14_4315 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301160126|emb|CBW19646.1| putative HlyD family secretion protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312914610|dbj|BAJ38584.1| secretion protein HlyD family [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321226636|gb|EFX51686.1| Putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323131946|gb|ADX19376.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|326629939|gb|EGE36282.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
 gi|332990438|gb|AEF09421.1| hypothetical protein STMUK_3572 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 355

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 19/300 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F  + E L     +            I     ++      +          ++  
Sbjct: 63  VSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSEMRAAQSVV 122

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L S  K     ++L ++ AVS   L+        +   L     +       I 
Sbjct: 123 KQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESARAALETAKAQVSAAKAAIE 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                 Q +   A    +  + +   +   + +P  G + Y + 
Sbjct: 183 AARTSIIQ-------------AQTRVEAAQATERRIVAD--IDDSELKAPRDGRVQY-RV 226

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +Q   +K G  A +      D+R     +
Sbjct: 227 AEPGEVLSAGGRVLNMVDLSD-VYMTFFLPTEQAGLLKIGGEARLVLDAAPDLRIPATIS 285

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            +  +     +  + ++ + +  + V  +I       +   ++ G P             
Sbjct: 286 FVASVAQFTPKTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLDERVPW 345


>gi|308049025|ref|YP_003912591.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
 gi|307631215|gb|ADN75517.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
          Length = 458

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/237 (11%), Positives = 79/237 (33%), Gaps = 22/237 (9%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              + +  +AL++  + D+ +   + E+   ++ + ++ +R + ++   +  N      +
Sbjct: 96  FAARVAQSKALVAKTEGDIALQTIVVER---ARVNFDKAQRDMERAEGLVAANYISADEV 152

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                +  + A ++    LK+    L   + T     + L   +   ++  I +PI G +
Sbjct: 153 -----DAVETALVQAELDLKQSEAQLAVLKATLEANRASLAQDQIELDRTEIRAPIDGFV 207

Query: 301 VYNQSFSSSNYAQQ--SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           +          A    +  L  +        I A +    I  +++G         + D 
Sbjct: 208 IDRTIERGQTVASSLNTPELFTLAKDLSQMEIEAYIDESDIGQLREGQRVDFTVDAFPDQ 267

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   + ++  I     +      Y  +      ++  + +  L  G  A +  
Sbjct: 268 SY------VGRVAQIRRAPQDTSGVISYTVI------ISAPNRSGTLLPGMTANLEI 312



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 10/164 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++G +   D+V  + +  SG I +  V+    +  G  L   +       +   
Sbjct: 45  INNTVSATGTLAAVDDV-IVGAQLSGQITEVYVDFNDTVSAGQLLAQIDPRTFAARVAQS 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +      I  +   ++     +D  ++  E  E  +           + +    + +
Sbjct: 104 KALVAKTEGDIALQTIVVERARVNFDKAQRDMERAEGLVA---------ANYISADEVDA 154

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           V  +L      ++        L+      RA L+  Q +L   +
Sbjct: 155 VETALVQAELDLKQSEAQLAVLKATLEANRASLAQDQIELDRTE 198


>gi|298368541|ref|ZP_06979859.1| HlyD family secretion protein [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282544|gb|EFI24031.1| HlyD family secretion protein [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 351

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/370 (11%), Positives = 114/370 (30%), Gaps = 82/370 (22%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           N +++ S + G +K    E G+++  G  L       +   ++  +              
Sbjct: 43  NRIDVASLYPGRVKAMPAEEGAEVKAGDVLAELSSETSGSRLEEAQ-------------- 88

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
                          A E+R+++ +       +   +      ++V  S        +  
Sbjct: 89  ---------------AAEARQQEAVSRARAAEAQMKQTVARAQANVAASR-------QQQ 126

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            + +++L+N                   + LF    VSQ+++ +++    ++        
Sbjct: 127 RVAKMELDNA------------------RKLFADQLVSQSEVTKRQADYERAAAA----- 163

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                      +  + A  E    + + +    + +   A   + +       +   I +
Sbjct: 164 ----------VKAAEAARDEAQATVAQSAAAQAEAKAAVAQAKAAVKSASFANDDMNIRA 213

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           PI+G +   +     N       ++ ++ P+     I   +    I  +K    A +R  
Sbjct: 214 PISGRV-EYKIAEVGNVVASGSKVVSLLDPNDVSMNI--FLPTGSISRLKVNDDARIRLD 270

Query: 354 HYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
               +    F A I+ I         + +  + + +  ++V L+I     +  N  L+ G
Sbjct: 271 GIDAV----FPAKIQFIATDAQFTPKAVETIDERAKLMFKVKLRIPRETAAKYNRLLKGG 326

Query: 409 FPAEVLFTAK 418
                     
Sbjct: 327 MTGNGFVKTD 336


>gi|302878160|ref|YP_003846724.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
 gi|302580949|gb|ADL54960.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
          Length = 502

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 95/292 (32%), Gaps = 23/292 (7%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A+E  E ++     +      +V   G + +  SL   +  +R      + +  +   + 
Sbjct: 155 AYEQIEARVTMSDEQLKQNNVEVLTAGPARIKNSL-QLIGEIRFNEDRMVHVVPRLIGVV 213

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ--ERIVYKSTLELRENIHEQKNMLRHINEL 247
              +++  D      +     +S   L  Q  + +  +  L L     E++  L      
Sbjct: 214 EAAAANAGDRVRKGQVLA--VISSQTLADQRSQLLAAQKRLVLARTTFEREKKLWEDKIS 271

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            ++  L+  N ++E    ++  Q+  A     L        +  I SPI G IV     S
Sbjct: 272 AEQDYLQAHNAMQEAEIAVQNAQQKLASLGGGLREGGN-LTRYEIRSPIDGIIVEKHI-S 329

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                +    +  IV      +    +  K +  VK G  ATV+   +          ++
Sbjct: 330 LGEAVKDDDKIF-IVADLSTVWAELTIYAKDMNTVKVGQQATVKATAFESQS----SGVV 384

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +  ++ +Q          +  + +     +   +  R G P  +   A  
Sbjct: 385 SYVGALVGEQSRTA------KARIVLP----NPKGVW-RPGLPVNIELVADE 425


>gi|32471544|ref|NP_864537.1| hypothetical protein RB1685 [Rhodopirellula baltica SH 1]
 gi|32443385|emb|CAD72218.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 432

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 77/191 (40%), Gaps = 17/191 (8%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             L+ R    E +++L  I+E   + ++  A+     S  L   +R     + K  +L+ 
Sbjct: 233 LQLDGRPLRIELESLLAEIDEAQKDEDIALASNQI-ASAQLAGLRRKT--LLRKAELLQD 289

Query: 286 TREQKTILSPIAG-TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
              +  ++SPI G  I  + + S     +  Q LM++ P      I  ++   +I  V+ 
Sbjct: 290 KLSKLDVVSPIDGIIIQGDLTRSLGTPLEIGQTLMEVAPEGN-VEIELELPESEIGFVEM 348

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
                + FP       + F++ ++ + P  + +D++        V + I +    + N  
Sbjct: 349 NAPVELWFPALD---GEAFESSVQSVWPAATIRDDSN-------VFVAIAE--LPNENAA 396

Query: 405 LRNGFPAEVLF 415
           LR G   E + 
Sbjct: 397 LRVGMRGEAIV 407



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 17/155 (10%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W  L         R  L+ I  ++ LI   I  P+     +   +   +    I SP   
Sbjct: 157 WGRLANKLSKWWSRRGLIGIAFLVTLILTCI--PMSYRTHAIATVAPMNGR-LIASPIDA 213

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +    V  G ++  G  LL  +               + LR  +++  + +D      D
Sbjct: 214 TLLTTLVRPGDRVTAGQTLLQLDG--------------RPLRIELESLLAEIDEAQKDED 259

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +   + +    QL     K     +++    +S +
Sbjct: 260 IALASNQIASAQLAGLRRKTLLRKAELLQDKLSKL 294


>gi|301154989|emb|CBW14452.1| multidrug efflux system [Haemophilus parainfluenzae T3T1]
          Length = 389

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 89/287 (31%), Gaps = 37/287 (12%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q  D L +   T +K+      S   +L   + ++  +      L++        L+  Q
Sbjct: 83  QAGDVLLELDDTNAKLSFEQAKS---NLANAVRQVSQLNYTVKQLKSAVRANEITLAQAQ 139

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +L     L +  A+ +      +  V  +   L  + ++ +     +            
Sbjct: 140 GNLNRRVQLVKDGAIDKESFQHAKEAVELAKANLTTSQNQLEANQALL------------ 187

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                +   L + Q      +S L       E+  I SPI G +   ++           
Sbjct: 188 -----LDGPLSE-QPQIQSAVSNLKQAWLNLERTKIRSPIKGYVAR-RNAQVGQAVSVGG 240

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----D 371
            LM +V  +   ++ A     Q+ H++ G    + F  Y   +   F   +  I      
Sbjct: 241 ALMAVV-TTDQMWLDANFKETQLTHMRIGQPVEIHFDLYGKDKT--FNGKVVGIEMGTGS 297

Query: 372 PIISQQDNNLQTQ-----EYYEVILKITDLAFSDNNIELRNGFPAEV 413
                   N         +   V +++     ++N + +  G  A V
Sbjct: 298 AFSLLPTQNATGNWIKVVQRVPVRIQLDPQQLAENPLRI--GLSATV 342


>gi|294507183|ref|YP_003571241.1| Multidrug transporter mdtA [Salinibacter ruber M8]
 gi|294343511|emb|CBH24289.1| Multidrug transporter mdtA [Salinibacter ruber M8]
          Length = 453

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 78/259 (30%), Gaps = 28/259 (10%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           R R+      +L      + A    + +    +  L  +    +  + Q E  +  +  E
Sbjct: 61  RARNQTAIYSELSQPVVAVEAQTGDYVEKGEPLVRL--RRVTYEQQVRQAEAALRTAKAE 118

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLK---------EISRDLEQNQRTFADEMSKL 280
            +      + +   +      A+ +F +  +         +     EQ Q       S L
Sbjct: 119 AQGAQASLRGLRSQLKRTERLADQDFESQQQLESLRAQVEQAEATYEQAQAQVEQAESTL 178

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              E    +  + +PI+G +   ++            L  I        +  +VT +   
Sbjct: 179 QERETALRRTVVRAPISGHV-GQRNVQVGQRVGPDTRLYTIG-DLDSVKVNVEVTDRMFG 236

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            ++ G TA +  P    +      A + ++ P +S+          Y     I     S+
Sbjct: 237 RIRPGQTARIHVPQQDTV----LVAPVARMSPFLSEDS--------YSAEAVI---EVSN 281

Query: 401 NNIELRNGFPAEVLFTAKN 419
           +   L  G   EV      
Sbjct: 282 DPRLLNPGMFVEVDVAYGE 300



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/113 (10%), Positives = 39/113 (34%), Gaps = 6/113 (5%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +   + + G  + +G PL+    +     +   + +++  +      +++L  L ++   
Sbjct: 76  VVAVEAQTGDYVEKGEPLVRLRRVTYEQQVRQAEAALRTAKAEAQGAQASLRGLRSQLKR 135

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            E+  +       DF  +      +       + Y   + ++ +  S    R 
Sbjct: 136 TERLAD------QDFESQQQLESLRAQVEQAEATYEQAQAQVEQAESTLQERE 182


>gi|229521411|ref|ZP_04410830.1| macrolide-specific efflux protein MacA [Vibrio cholerae TM
           11079-80]
 gi|229341509|gb|EEO06512.1| macrolide-specific efflux protein MacA [Vibrio cholerae TM
           11079-80]
          Length = 395

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 74/232 (31%), Gaps = 28/232 (12%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE--------------- 254
            V+Q D   Q+  + ++   L     + +     I++   E N +               
Sbjct: 88  LVAQIDSLTQQNKLKEANASLNSTNAQIRAKQAQIHQAQAEFNRQKGMLADKASSKADFE 147

Query: 255 -FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                L     +LEQ +         +   +      TI +P  GT+VY+          
Sbjct: 148 SAETSLAVYKAELEQLKAELELAKINVDSAKVDLGYTTIQAPFDGTVVYSAV-EEGQTVN 206

Query: 314 QSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +Q    I+  +      I+A+++   + +VK G           + R       IE   
Sbjct: 207 ANQTAPTIIELAQLDKMTIKAQISEADVINVKPGLPVYFTILGKPNKRYHATLRAIEPGP 266

Query: 372 PIISQQDNNLQTQE----YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            ++   D NL        YY  + ++      + +  LR G  A+V      
Sbjct: 267 TLMDGDDKNLAVGNDEAIYYHGLFEV-----ENPDRTLRIGMTAQVSIILDK 313



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 52/133 (39%), Gaps = 3/133 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    IE +V ++G +     +V + +  SG I+K  V  G ++ QG  +   + +   +
Sbjct: 41  AQRGNIESTVLATGMLQAS-KLVAVGAQVSGQIEKLAVALGDEVKQGDLVAQIDSLTQQN 99

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +     S+ +    I  +++ +     +++  +     +     DF      T   V+ 
Sbjct: 100 KLKEANASLNSTNAQIRAKQAQIHQAQAEFNRQKGMLADKASSKADFESA--ETSLAVYK 157

Query: 155 YGISSVYRSLKMK 167
             +  +   L++ 
Sbjct: 158 AELEQLKAELELA 170


>gi|104782681|ref|YP_609179.1| RND efflux membrane fusion protein [Pseudomonas entomophila L48]
 gi|95111668|emb|CAK16389.1| putative RND efflux membrane fusion protein [Pseudomonas
           entomophila L48]
          Length = 391

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 6/139 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE SV++ G +     V ++ +  SG I+K   E G ++ QG  L+  +       +D
Sbjct: 44  ADIESSVTALGTLQPRRYV-DVGAQASGQIRKLHAEAGDEVRQGQLLVEIDPSTQQAKLD 102

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKV-- 152
             + SI+NL+  +  +++       +Y     L  A  +R+E L     +   T +++  
Sbjct: 103 AGRFSIENLKAQLAEQRAQFVLAQQQYQRQHDLAAAGATRQEDLQAAQAQLKVTQARIDM 162

Query: 153 FNYGISSVYRSLKMKLTRM 171
           +   I     SL+     +
Sbjct: 163 YQAQIRQAQASLRSDEAEL 181



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 81/299 (27%), Gaps = 57/299 (19%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q    + K H+        G   V      +  ++ +   +  +L+ + +  RA     
Sbjct: 66  AQASGQIRKLHAEAGDEVRQGQLLVEIDPSTQQAKLDAGRFSIENLKAQLAEQRAQFVLA 125

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+      +L    A  Q DL   +               + K     I+    +     
Sbjct: 126 QQQYQRQHDLAAAGATRQEDLQAAQ--------------AQLKVTQARIDMYQAQIRQAQ 171

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A+   +                      E       I +P+ GT+V   +          
Sbjct: 172 ASLRSD----------------------EAELGYTRIYAPMDGTVVAVDAR-EGQTLNAQ 208

Query: 316 Q--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           Q  PL+  +       + A+V+   I  VK G TA          R       I  I P 
Sbjct: 209 QQTPLILRIAKLSPMTVWAQVSEADIGKVKPGMTAYFTTLAGGKRRWSSTVRQILPIPPK 268

Query: 374 ISQQDNNLQTQEY-------------YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +Q +                    Y V+L +      + +  L      +V F A  
Sbjct: 269 PLEQSSQGSGSPASATAGTSGSKVVQYTVLLDV-----ENPDGALMAEMTTQVFFVAGQ 322


>gi|116625540|ref|YP_827696.1| multidrug resistance efflux pump-like protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116228702|gb|ABJ87411.1| Multidrug resistance efflux pump-like protein [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 470

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 78/259 (30%), Gaps = 28/259 (10%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS---------TLEL 230
           D +N+   L     +  +   M+K +    A  +   NQQ R              T E+
Sbjct: 159 DPQNQLQRLDDYKDTAIQQENMVKKMMANLAAVKEAHNQQVRSAKADWDKAVLDLKTAEV 218

Query: 231 RENIHEQK--NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           R  I  +K    +      Y +   E A   +     +  ++        ++   E   +
Sbjct: 219 RSAIDAEKYKLTVEEDEANYKQLLAEAALVEESQRAQIRSSELNRDQSKIEMARAEANVK 278

Query: 289 QKTILSPIAGTIVYNQSFSSSNY--------AQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
           + ++ +P+ G +V      +  +            QP ++IV       + A V     +
Sbjct: 279 KMSVKAPMDGIVVMQSIVRNGEFGQIREGDQVAAGQPFVQIV-DPSSMVLNATVNQVDAE 337

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            ++ G  AT+    Y DI   +    +  I  +        +      V +K        
Sbjct: 338 KLRLGMKATIHMDAYPDI---ELPGTLVGIGAMAKASTFRARFVGEIPVRIK-----LEK 389

Query: 401 NNIELRNGFPAEVLFTAKN 419
            +  +             +
Sbjct: 390 TDPRVIPDLTGSAEIVLGS 408


>gi|297618115|ref|YP_003703274.1| efflux transporter RND family, MFP subunit [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145952|gb|ADI02709.1| efflux transporter, RND family, MFP subunit [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 386

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/334 (11%), Positives = 97/334 (29%), Gaps = 61/334 (18%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E  +    ++  +++              ++       +   A   +  +++   G   S
Sbjct: 34  EPAQIPVQVEKARLADVEKIAVYSGTLRGVEEAVAYPKLSAAAGAVKVVEVMVKPGDRVS 93

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +       +   ++    ++  +   R   + + S L+  L          + L++
Sbjct: 94  QGQTLIRLDSGDLEYQIRAYEAQLAGLVAQREGAQVRLSNLKQTLDR-------TRFLYD 146

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           + AVS++DL + E     +   L++          +                        
Sbjct: 147 QGAVSKSDLERAETEYEAAVAGLKQIDAGIAGAQAN------------------------ 182

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
                       L    +      + SP+ GT+      +  +    +Q  + +V ++  
Sbjct: 183 ------------LDNARRNLANCNVPSPVGGTVGTVNVSAGDSV--TAQTPVTVVSNTSR 228

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQEY 386
             ++  V   +I +VK G    V    Y      + F   ++ +      +         
Sbjct: 229 LEVQVNVAEAEISYVKPGAQVKV----YVQAASPEPFTGTVDTVATTADSRMKT------ 278

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           Y V + +      +    L++G  AEV       
Sbjct: 279 YPVKILLD-----NPKGMLKSGMFAEVHLPTMVR 307



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 37/114 (32%), Gaps = 2/114 (1%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V+ G ++ QG  L+  +  +    I   +  +  L      E + +   N K  +
Sbjct: 81  VVEVMVKPGDRVSQGQTLIRLDSGDLEYQIRAYEAQLAGLVAQ--REGAQVRLSNLKQTL 138

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               F   +  +     +   T  +    G+  +   +      + +   N  +
Sbjct: 139 DRTRFLYDQGAVSKSDLERAETEYEAAVAGLKQIDAGIAGAQANLDNARRNLAN 192


>gi|15964887|ref|NP_385240.1| putative transport protein transmembrane [Sinorhizobium meliloti
           1021]
 gi|307300958|ref|ZP_07580727.1| secretion protein HlyD family protein [Sinorhizobium meliloti
           BL225C]
 gi|15074066|emb|CAC45713.1| Multidrug resistance protein [Sinorhizobium meliloti 1021]
 gi|306903913|gb|EFN34499.1| secretion protein HlyD family protein [Sinorhizobium meliloti
           BL225C]
          Length = 362

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/373 (13%), Positives = 109/373 (29%), Gaps = 85/373 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               V  I    SG + +  V +  ++  G  L+  +D        +    +   +  + 
Sbjct: 52  VRGYVTTISPQLSGYVAEVPVRDYEEVRAGQLLVRIDD-------RIYVQKLAQAKATLA 104

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T++SAL                                        +S  + L  K    
Sbjct: 105 TQRSALA---------------------------------------NSFEQELSAK---- 121

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                     E +    +A L++ +     ++ L +K   +++D +Q      ++   ++
Sbjct: 122 ----AGIAASEAQLDGAKAALATARATWDRIRPLADKGVATRSDADQARAAFEQADAGVK 177

Query: 232 ENIHEQKNMLRHINELYD-EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           + I   +   + +       A LE +    E + +L +                   +  
Sbjct: 178 QAIANLEVSRQSLATTLGARAGLEGSVAGAEAAVELAEI----------------DLDNT 221

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I++P AG +    +     Y      L+ +VP     +I A     Q+  ++ G   T+
Sbjct: 222 RIVAPRAGRLGEIGAR-VGQYVTAGTQLLSVVP--HEVWIVANFKETQLDGMRVGQPVTI 278

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNN 402
                        +  IE+  P    +      +  T  + +V     ++I         
Sbjct: 279 SVDALNRQ---VLRGHIERFSPAAGSEFSIIRPDNATGNFTKVAQRLGVRIAVDPEQPMA 335

Query: 403 IELRNGFPAEVLF 415
             L  G    V  
Sbjct: 336 DRLAPGLSVVVRV 348


>gi|300312743|ref|YP_003776835.1| membrane-fusion protein [Herbaspirillum seropedicae SmR1]
 gi|300075528|gb|ADJ64927.1| membrane-fusion protein [Herbaspirillum seropedicae SmR1]
          Length = 402

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 81/240 (33%), Gaps = 29/240 (12%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHE---QKNMLRHINELYDEANLEFANYLKE----- 261
           AV  + +      + +   EL     +    +   +   +L  E      +Y        
Sbjct: 117 AVQSSRIENNRATLARLKAELAGQNAQLDFAQLQFQRQTQLKAENATREESYESSRMNMY 176

Query: 262 -ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
             +  ++          + +   E  ++Q  I +P++GTIV   +      A   + LM+
Sbjct: 177 AAAARVDATNAQIQQTEAAIREDEAVQKQTRIEAPVSGTIVTLNARPGQMVAANQEALMR 236

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           I        ++  V  + +  ++KG TA    P Y     K++   + +I  + +     
Sbjct: 237 IA-DLSRMTVQVPVAEEDVTRLQKGMTAYFTTPGYP---GKRWSGKLRQIMLLPTDDSGR 292

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL--------FTAKNTTLAQEIIHPITD 432
              + +Y V   + + +      EL +G  A+V               TL   +  P  D
Sbjct: 293 QGKKAFYTVFFDVANPSR-----ELMSGMSADVYFVLARAEHVPTIPRTL---VTKPGMD 344


>gi|260495444|ref|ZP_05815570.1| efflux transporter [Fusobacterium sp. 3_1_33]
 gi|260196981|gb|EEW94502.1| efflux transporter [Fusobacterium sp. 3_1_33]
          Length = 389

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 97/282 (34%), Gaps = 25/282 (8%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYR-SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           L + + +   + + V +  + S  R  +  +++   +     L  E K   L A + S  
Sbjct: 35  LTETVKRSDISQTIVASGTVRSNNRVEVGAQVSGKITKINVVLGQEVKKGDLIATIDSLT 94

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++  + +      A S+  + Q +R       ++  +   + + L  +N +  +      
Sbjct: 95  QNNNLDE------AKSKLKVYQAQRKSASVKYQVARSKFNRISKLYQMNSISQDDYETAK 148

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             L+     + +     A     +   E      +I SPI G ++     S       +Q
Sbjct: 149 EELEVAKASVTEYDELIAQASISVKTAETNLSYTSITSPIDGVVISIPV-SEGQTVNSNQ 207

Query: 317 PLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               IV  +      I+A+V    I  VKKG    V      D   K     ++ +D   
Sbjct: 208 SAPTIVQVADLSKMLIKAEVAEGDITKVKKGMEVEVATVANPDKTYKS---TVQSVDYAT 264

Query: 375 SQQDNNLQTQE-------YYEVILKITDLAFSDNNIELRNGF 409
           S   +N  ++        YY   + + +    D N+ +  G 
Sbjct: 265 STLTDNEYSESVSNTSAVYYYANIILDN---KDGNLRI--GM 301



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 1/110 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  ++ +SG +   +N VE+ +  SG I K  V  G ++ +G  + T + +   + +D  
Sbjct: 44  ISQTIVASGTVR-SNNRVEVGAQVSGKITKINVVLGQEVKKGDLIATIDSLTQNNNLDEA 102

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           K  +K  +    +         +K++ + K ++       D+        
Sbjct: 103 KSKLKVYQAQRKSASVKYQVARSKFNRISKLYQMNSISQDDYETAKEELE 152


>gi|229520595|ref|ZP_04410019.1| membrane-fusion protein [Vibrio cholerae TM 11079-80]
 gi|229342419|gb|EEO07413.1| membrane-fusion protein [Vibrio cholerae TM 11079-80]
          Length = 377

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 70/198 (35%), Gaps = 12/198 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS  +GI+ +  V  G  I QG PL+      T   +   
Sbjct: 43  IEKQAVAVGQIMPS-HSVAIKSQINGIVGEIYVREGQHIEQGQPLIKVRPNPTPQALTDA 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              +     +++++   L  L    K  ++   ++       D   K      K  N  +
Sbjct: 102 STELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLDL 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMKNLFEK 208
                +   +     ++Y               E   S   +  ++    L  MKN+  K
Sbjct: 162 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFK 221

Query: 209 NAVSQNDLNQQERIVYKS 226
            +VS++D  Q    +  S
Sbjct: 222 GSVSEHDAAQLNAGMPAS 239



 Score = 43.1 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 87/225 (38%), Gaps = 35/225 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  ++    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 98  LTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQ 157

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM---------KIV 322
                 S    + + +   T+ +PI+GTI+  +        +  +P++         +++
Sbjct: 158 NLDLIRSGEASIGQAKLSSTLYAPISGTILNIK-------VEVGEPIISTESSQAATEMI 210

Query: 323 PHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + +     +  V+      +  G  A++    Y    E+     + K+  I S++ NN
Sbjct: 211 QLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP---EQVINGQLTKV-AIQSERLNN 266

Query: 381 LQ---TQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +    + +   ++V +   D+     N+ LR+GF A    T + 
Sbjct: 267 PENKDGKSFDNGFQVEIGQLDI---PENMTLRSGFSASAKITLQR 308


>gi|187924010|ref|YP_001895652.1| secretion protein HlyD [Burkholderia phytofirmans PsJN]
 gi|187715204|gb|ACD16428.1| secretion protein HlyD family protein [Burkholderia phytofirmans
           PsJN]
          Length = 413

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 95/298 (31%), Gaps = 26/298 (8%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + Q++       +  +      +S+   +L   + ++  +Y+N        +  +
Sbjct: 80  AVNADDTQIVKQGAPVVTLDNADAKVALSNAEATLGQTVRQVSGLYVNNDFYAATVAQRQ 139

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L+    DL   + + E  AVS                   E+I   ++ +       D
Sbjct: 140 SDLARANDDLKRRQAVAETGAVS------------------GEDIAHARDAVSSAQAALD 181

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A  +         R   +         SK+     +  + T+ +P+ G +   +S    
Sbjct: 182 AARQQAEANHALTDRTSIEQHPNVQAAASKVRDAYLSYARNTLPAPVTGYVAR-RSVQVG 240

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR--EKKFKAII 367
                  PLM IVP     ++ A     Q++H++ G   T+    Y        + +   
Sbjct: 241 QRVAPGTPLMAIVPLDG-VWVDANFKEGQLRHMRIGQPVTLTADVYGSSVKYHGRLEGFS 299

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFTAKNTT 421
                  +       T  + +V+ ++      D N      LR G   +V       T
Sbjct: 300 AGTGAAFASLPAQNATGNWIKVVQRLPARILLDQNELNAHPLRIGLSMDVEVDTHEET 357



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 60/182 (32%), Gaps = 10/182 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N+V++    SG +     ++   + QG P++T ++ +    +   + ++      + 
Sbjct: 63  VSGNLVQLTPQVSGTVVAVNADDTQIVKQGAPVVTLDNADAKVALSNAEATLGQTVRQVS 122

Query: 112 TEKSALDFLNN-----KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                 DF        + D+     + +  Q +   G             +SS   +L  
Sbjct: 123 GLYVNNDFYAATVAQRQSDLARANDDLKRRQAVAETGAVSGEDIAHARDAVSSAQAALDA 182

Query: 167 KLTRMRS--IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
              +  +     +R  +E   ++  A        L+  +N         V++  +   +R
Sbjct: 183 ARQQAEANHALTDRTSIEQHPNVQAAASKVRDAYLSYARNTLPAPVTGYVARRSVQVGQR 242

Query: 222 IV 223
           + 
Sbjct: 243 VA 244


>gi|332678576|gb|AEE87705.1| Membrane fusion component of tripartite multidrug resistance system
           [Francisella cf. novicida Fx1]
          Length = 341

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 64/206 (31%), Gaps = 13/206 (6%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL- 230
           +   L      +K    +  L+  Q+ +    N+ + N             +    ++L 
Sbjct: 96  KDYQLKVAQANSKVIQTKGQLAIAQEQV----NVAKSNLTKAQSSLDTATSMADRYIKLY 151

Query: 231 RENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +++    ++  ++IN+       +   Y  LK+    +E  +                  
Sbjct: 152 KDDAGSLQDAQKYINQKIQAQKAKDEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLG 211

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             T+++P  G +   + +         Q L   +  +K  +I A      +  +K G   
Sbjct: 212 YTTLIAPDDGYVSNLKLY-KGQLVSPGQALFGFI-DNKKWWIDANFKETDLDRIKPGQKV 269

Query: 349 TVRFPHYADIREKKFKAIIEKIDPII 374
            +    Y+      +   ++ I    
Sbjct: 270 EIELDMYSHS----YAGKVDSISYAT 291



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 57/185 (30%), Gaps = 10/185 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
              +++ I     G I+K  + N   + +G  L+  E         +    +   K  + 
Sbjct: 58  VNADIISISPKVGGYIEKVYIHNNQFVHKGDKLVQIEPKDYQLKVAQANSKVIQTKGQLA 117

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +  ++  KS L    +  D    +   R  +L            K  N  I +  ++ 
Sbjct: 118 IAQEQVNVAKSNLTKAQSSLDT-ATSMADRYIKLYKDDAGSLQDAQKYINQKIQA-QKAK 175

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIV 223
               + ++   L     + +    +    +   +L     +  +   VS   L + + + 
Sbjct: 176 DEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLGYTTLIAPDDGYVSNLKLYKGQLVS 235

Query: 224 YKSTL 228
               L
Sbjct: 236 PGQAL 240


>gi|332528647|ref|ZP_08404629.1| secretion protein HlyD family protein [Hylemonella gracilis ATCC
           19624]
 gi|332041963|gb|EGI78307.1| secretion protein HlyD family protein [Hylemonella gracilis ATCC
           19624]
          Length = 363

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 79/282 (28%), Gaps = 32/282 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   ++     L      + +      + + + +L R+   S  ++     +L   N VS
Sbjct: 92  YRVAVAGAEAKLAQVRNDLAATRAGYREKQAEIALARSRYQSALREQKRQADLVASNFVS 151

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
                           +   +            E   +   E     +       +    
Sbjct: 152 AVQY------------DNARDAATIAQQQVQTLEEDLKRIGETLGGGENALTAPIEKHPN 199

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           +    + L        +  + + + GT+  N+      +       M +V  +   +I A
Sbjct: 200 YLAAQASLAQARLDLARVEVRASLPGTV--NKPPKPGQFVSPGASAMALV-VNGEPWIEA 256

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-------- 384
                 + HV+ G    +R   Y D     +   ++ + P    + + +  Q        
Sbjct: 257 NFPETDLTHVQAGQPVVIRVDTYPDA---VWTGTVDSLSPATGAEFSVIPAQNATGNWVK 313

Query: 385 --EYYEVILKITDLAFSDNNI----ELRNGFPAEVLFTAKNT 420
             +   V +++  L    +      ELR G  A V       
Sbjct: 314 IAQRVPVRIRLQSLQARSSGTGTAPELRAGLSAHVEIDTGYR 355



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/119 (9%), Positives = 43/119 (36%), Gaps = 3/119 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + + V + +   G +++  V+    +  G PL   +D      +   +  +  +R  + 
Sbjct: 52  VKADKVPVSAEVQGTVQQVLVQENETVAAGQPLFRVDDAPYRVAVAGAEAKLAQVRNDLA 111

Query: 112 TEKSALDFLNNKYDVLEKAFES---REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++       +  +    ++S    +++  D +     +  +  N   ++     +++
Sbjct: 112 ATRAGYREKQAEIALARSRYQSALREQKRQADLVASNFVSAVQYDNARDAATIAQQQVQ 170


>gi|78189371|ref|YP_379709.1| membrane-fusion protein-like [Chlorobium chlorochromatii CaD3]
 gi|78171570|gb|ABB28666.1| Membrane-fusion protein-like protein [Chlorobium chlorochromatii
           CaD3]
          Length = 631

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 17/191 (8%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           + E ++    +    +E      N L E+   + +  R  AD  S+  ++    +   I 
Sbjct: 440 LEESRSAADVLRYQQEEKKAMAQNALAEM--KVAEALRRQAD--SRYQMIRYNLQHADIR 495

Query: 294 SPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +P +G +V  +         ++   L+K V   +  YI  KV  + IQ  K G    V  
Sbjct: 496 APFSGIVVEGDLEKLLGAPVRKGDVLLK-VAKLEKLYIEIKVAERDIQEFKVGQEGEV-- 552

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             +     KK+  ++++I+P+   +    Q    + V+  IT+      +   R G    
Sbjct: 553 -AFISQPSKKYTVVVDRIEPMAVTE----QKGNVFLVLGHITEA----RDAWWRPGMSGL 603

Query: 413 VLFTAKNTTLA 423
              +     + 
Sbjct: 604 AKVSVGERHIL 614


>gi|49474724|ref|YP_032766.1| hypothetical protein BQ12390 [Bartonella quintana str. Toulouse]
 gi|49240228|emb|CAF26698.1| hypothetical protein BQ12390 [Bartonella quintana str. Toulouse]
          Length = 406

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 79/231 (34%), Gaps = 26/231 (11%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           +L  K AV  +       +  ++ L L +   E++  +   + +      E A  LK   
Sbjct: 108 DLKRKKAVLSHYYANL--LEQQAYLSLAQKNLERQKKMIKTHAISQANLDEVATQLKTRE 165

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             + Q  +        +   E       I +P AGT++              Q    IV 
Sbjct: 166 AQIAQLHQQIVQAQIDVDSAEVNLGYTRITAPSAGTVLA-TVVEEGQNVNAVQSAPTIVI 224

Query: 324 HSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP----IISQQ 377
                   ++A+++   +  V  G    + F  + +  +++++  +E+I+P    I + +
Sbjct: 225 LGDLSKMIVKAQISEADVLKVHAGQP--LYFTVFGNS-QRRYEGTLERIEPAPESIRADE 281

Query: 378 DNNLQTQE---------YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             N   +          YY  I+ +      + +  LR    A+V      
Sbjct: 282 SINPGIERGNSLTSSAIYYNGIVHVD-----NKDNFLRTYMTAQVHIILGR 327



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 68/186 (36%), Gaps = 20/186 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW--SIL---------------LPIEISVSSSGEIL 51
           +K+      K    L+ I  + L+ W  S+                  IE SV +SG + 
Sbjct: 6   IKKFITKRKKLSLFLAGIFFVVLLLWLRSVFFGTPSPTYMTAVVKRGDIEESVLASGLVR 65

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               +V + +  +G +    V  GS + +G  L   +  +  + +  KK  + +   ++ 
Sbjct: 66  PY-RLVAVGARTTGRVVSMPVFPGSVVKEGDLLAEIDSTDQENDLKRKKAVLSHYYANLL 124

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +++ L       +  +K  ++      +      +T  K     I+ +++ +      +
Sbjct: 125 EQQAYLSLAQKNLERQKKMIKTHAISQANL--DEVATQLKTREAQIAQLHQQIVQAQIDV 182

Query: 172 RSIYLN 177
            S  +N
Sbjct: 183 DSAEVN 188


>gi|237807369|ref|YP_002891809.1| secretion protein HlyD family protein [Tolumonas auensis DSM 9187]
 gi|237499630|gb|ACQ92223.1| secretion protein HlyD family protein [Tolumonas auensis DSM 9187]
          Length = 325

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 88/303 (29%), Gaps = 40/303 (13%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L      +      R   +    G       K+     + +   L+    +++    N 
Sbjct: 44  RLEATEVDVATKIAGRLSSIEVQEGDDLQVKQKIAEIEATELQAQLRAAEAQVQQALENT 103

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            ++    +   +  +  +  L     L  KN +S++ L+Q    +          + +  
Sbjct: 104 QEVIAGVASAESQYNLARITLARSDKLMSKNFISKDQLDQDRSAL---------QVAQAG 154

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                       A +  A    E+                    L+ T +  T+ +PIAG
Sbjct: 155 LTAARTRVKAANAAVATAKANAEV--------------------LQSTLQDTTLTAPIAG 194

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++Y +             ++ ++  +    +   ++  +   V  G  A +     AD 
Sbjct: 195 RVLY-RLAEPGEVLAAGGKVVTLLDLND-VTMSVYLSAAEAGQVTLGAPAHIMLDALAD- 251

Query: 359 REKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                 A +  + P         +  N + +  + + +++     + +    + G P   
Sbjct: 252 ---PVPAKVVYVAPRAQFTPKEVETRNEREKLMFRIKVRVDPAWLATHATLAKPGMPGVA 308

Query: 414 LFT 416
              
Sbjct: 309 YIK 311


>gi|183599069|ref|ZP_02960562.1| hypothetical protein PROSTU_02515 [Providencia stuartii ATCC 25827]
 gi|188021286|gb|EDU59326.1| hypothetical protein PROSTU_02515 [Providencia stuartii ATCC 25827]
          Length = 356

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 82/293 (27%), Gaps = 19/293 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F    + L     +            +     ++    + +      +L  +   
Sbjct: 64  VREGDFVKEGQVLAKMDTRALQEQLHEVQAQLRQAISNVSTAESGLVQRESEKLAAQAVV 123

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L + QK L   + L    AVSQ  ++     V  +   L+    +    L  I 
Sbjct: 124 RQREAELDAAQKRLNRSRALVRTKAVSQQQVDDDTAQVQGAKAALQAAKAQVAASLAAI- 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              D A          +       +R  AD            +   + +P  G I Y + 
Sbjct: 183 ---DSAKAGVVQAKTRVDAATATERRIIAD-----------LDDSVLKAPRNGRIQY-RV 227

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +    V  G    +      +I       
Sbjct: 228 AEPGEVLGAGGRVLNMVDLSD-VYMTFFLPTEDAGKVALGSDVHIVLDAAPNIVIPAKAT 286

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +  +     +  +  N + +  + V  +I+      N   ++ G P +    
Sbjct: 287 FVASVAQFTPKTVETQNERLKLMFRVRARISPELLEKNLEYVKTGLPGKAYVR 339



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 73/210 (34%), Gaps = 2/210 (0%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +K N    +  + ++ II   G   WS+      +  +      E   ++I +  +G I 
Sbjct: 1   MKINKRKIIFYVAIILIIAAGGFYYWSMNSSSLPAGFAQSNGRIEATEIDIATKTAGRID 60

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V  G  + +G  L   +     + +   +  ++    ++ T +S L    ++    +
Sbjct: 61  TITVREGDFVKEGQVLAKMDTRALQEQLHEVQAQLRQAISNVSTAESGLVQRESEKLAAQ 120

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                RE +L     + + + + V    +S   + +     +++         + + +  
Sbjct: 121 AVVRQREAELDAAQKRLNRSRALVRTKAVSQ--QQVDDDTAQVQGAKAALQAAKAQVAAS 178

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            A + S +  +   K   +    ++  +  
Sbjct: 179 LAAIDSAKAGVVQAKTRVDAATATERRIIA 208


>gi|88705779|ref|ZP_01103488.1| conserved hypothetical protein, membrane or secreted
           [Congregibacter litoralis KT71]
 gi|88699850|gb|EAQ96960.1| conserved hypothetical protein, membrane or secreted
           [Congregibacter litoralis KT71]
          Length = 365

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 89/302 (29%), Gaps = 42/302 (13%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E   +++   L D         ++ FN    ++ R L+ K    RS              
Sbjct: 29  EPTLDTKTAPLADREQALPRVRTRQFNAEQRTLTRILRGKTASKRS-------------- 74

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             A +S+      + +       V + D  +   ++ +  ++ RE    +        EL
Sbjct: 75  --ATVSAETAGRVIARP------VERGDRVEAGTLLCELAIDDREAAVAEAEAALSQAEL 126

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                LE  +        + Q         + L   +    +  I +P  G I       
Sbjct: 127 EYRGALELQDKNLLSKIRIAQVAAELESARAGLARQQLNLARTRITAPFDGVIETLHID- 185

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             + A   +P   ++       I A V+ + I +V  G   T R        ++K    +
Sbjct: 186 VGDLASIGEPCATLI-DLDPLLIEANVSEQDINYVGLGSPVTAR-----TSTDEKLLGEV 239

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
             +  +             Y V + +      + +  LR G         +  T+    +
Sbjct: 240 TFVGSVSDAATRT------YPVEITVP-----NPDYRLRAGLTTVASVETE--TVLAHRV 286

Query: 428 HP 429
            P
Sbjct: 287 SP 288


>gi|332830533|gb|EGK03154.1| hypothetical protein HMPREF9455_00724 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 416

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 105/356 (29%), Gaps = 93/356 (26%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEIS---------------VSSSGEILNE 53
            K++ P     + LL++IG       +  L IE                 V   G++   
Sbjct: 12  QKKHIPFIAGGIFLLAVIGWFIFGNHASKLNIEKDKVTIQESTKGMFNDYVRIPGQVQPI 71

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            N + + +   G++ +  +E GS + QG  ++   +                        
Sbjct: 72  -NTIFLSAIEGGMVAEKLIEEGSDVHQGDVIIRLTN------------------------ 106

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                       +L       E QL +      +T                        S
Sbjct: 107 -----------PMLSLYILDSEAQLAEKQNFLRNTQV----------------------S 133

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +   RL L+ +   L   +   ++     K L+ +   S+ +  Q +   Y   ++ R  
Sbjct: 134 MEQERLSLKKEKLQLDMDVERKKRKYEQYKQLYSEKLTSKEEYLQAKED-YDFAVDGRVL 192

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           I E++        +                  ++Q + +  +    L ++ +  +   + 
Sbjct: 193 IVERQKQDSLYRGI-----------------QVDQMEESLHNIRKNLVLVRQRVDNLNVK 235

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           +P+ G  +              + + +I   S    + A +    I  VK G  AT
Sbjct: 236 APVDGQ-LGVLDVEIGQTVASGERIGQISVLSD-YKVEAMIDEHYIDRVKPGLDAT 289


>gi|291288288|ref|YP_003505104.1| efflux transporter, RND family, MFP subunit [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290885448|gb|ADD69148.1| efflux transporter, RND family, MFP subunit [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 392

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 53/330 (16%), Positives = 110/330 (33%), Gaps = 45/330 (13%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           ++T  + +    S ++    + +EK+A  F+  K     +       Q +       S  
Sbjct: 36  VQTMTVSNSDTASSRSFTATVSSEKTA--FIIPKVVGYVEQIPVNPGQKIQKGDLLVSIK 93

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S       +    +++     ++   +     E +    ++     +K      NL + N
Sbjct: 94  SGELEDKYNFAKSAVRESENALKQSEIGLKMAEGQYKQAQSQFELAKKTYDRFSNLIKNN 153

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +VS+ + +Q E     +   L  NI E+   L                        +EQ 
Sbjct: 154 SVSRQEFDQVEANYDLARQAL--NISEENVSLAR--------------------EKVEQV 191

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +       S L+ ++       I +P  G ++     +  N A    P+MKI   +  T 
Sbjct: 192 KLKEQQARSMLSEVQTYLSYTQIKAPFDGVVLEKNMDA-GNLASPGNPIMKI--GNSSTV 248

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   ++   I  ++ G  A +           ++++ + +I P I     N      ++V
Sbjct: 249 VYTYISQSLINEIQPGTEAVISIESMNA----EYESEVLEISPEIDVFTGN------FKV 298

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            L   D        +L  G  A V F   +
Sbjct: 299 KLMGCD--------KLYPGMFARVRFATGS 320



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 59/144 (40%), Gaps = 5/144 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V  G +I +G  L++ +  E  D  +  K +++     +   +  L     +Y
Sbjct: 70  GYVEQIPVNPGQKIQKGDLLVSIKSGELEDKYNFAKSAVRESENALKQSEIGLKMAEGQY 129

Query: 125 DVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +  FE  ++    F  L K +S   + F+   ++   + +       ++ L R  +E
Sbjct: 130 KQAQSQFELAKKTYDRFSNLIKNNSVSRQEFDQVEANYDLARQALNISEENVSLAREKVE 189

Query: 183 N---KSSLLRALLSSHQKDLTMMK 203
               K    R++LS  Q  L+  +
Sbjct: 190 QVKLKEQQARSMLSEVQTYLSYTQ 213


>gi|146341985|ref|YP_001207033.1| HlyD family multidrug resistance protein [Bradyrhizobium sp.
           ORS278]
 gi|146194791|emb|CAL78816.1| putative Multidrug resistance protein (hlyD family), emrA-like
           [Bradyrhizobium sp. ORS278]
          Length = 423

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 86/254 (33%), Gaps = 10/254 (3%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +L     ++RS      +++ + ++ +A +++ Q  +   +          +   Q  R 
Sbjct: 155 ALAQAEAQVRSAEAAIHNIDAQIAVQQAQITAGQAQVDQSQAGLTFAQQQADRYQQLART 214

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-ISRDLEQNQRTFADEMSKLT 281
              +    ++   + +     +     +ANL+ A    E +    E      A   ++  
Sbjct: 215 GSGTVQSEQQYTSQLQQAKAALTS--SQANLQVAQRQLESLKAQRESADANLAQAQAQRD 272

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
             +       + +   G +V   + +   +A Q   L   VP     ++ A     Q+  
Sbjct: 273 QAQLNLSYTVVTAAQPGRVVNLSA-ADGQFAAQGTALSMFVP--DEVWVTANFKETQLDQ 329

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKID-PIISQQDNNLQTQEYYEVILKIT---DLA 397
           ++ G   T+    Y +   +   A ++    P  S       T  Y +++ ++    D+ 
Sbjct: 330 MRPGQPVTLEIDAYPEREIRGHVASVQSGSGPAFSLLPPQNATGNYVKIVQRVPVKIDMD 389

Query: 398 FSDNNIELRNGFPA 411
               ++ L  G   
Sbjct: 390 DPPTDVALGPGMSV 403



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/198 (9%), Positives = 57/198 (28%), Gaps = 13/198 (6%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIG----LITWSILLPIEISVSSSGEILNEDNVVEIKS 61
            + L R HP       ++ +    G        S     + +  +            I  
Sbjct: 69  RRGLLRRHPVGAAVGLVVLLAAAAGGYVYFDAASHFESTDDAFIA-------ARQFSIAP 121

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             SG I    V +   +  G  +   +D +    +   +  +++    I    + +    
Sbjct: 122 KVSGYITSVPVTDNQHVKAGDVIARIDDRDYKTALAQAEAQVRSAEAAIHNIDAQIAVQQ 181

Query: 122 NKYDVLEKAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            +    +   +  +  L         +   ++  +  + S  +          ++  ++ 
Sbjct: 182 AQITAGQAQVDQSQAGLTFAQQQADRYQQLARTGSGTVQSEQQYTSQLQQAKAALTSSQA 241

Query: 180 DLENKSSLLRALLSSHQK 197
           +L+     L +L +  + 
Sbjct: 242 NLQVAQRQLESLKAQRES 259


>gi|84683695|ref|ZP_01011598.1| NolF secretion protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84668438|gb|EAQ14905.1| NolF secretion protein [Rhodobacterales bacterium HTCC2654]
          Length = 405

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 91/293 (31%), Gaps = 23/293 (7%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E  E+              ++  + ++ V      +  R+         +   + +   L
Sbjct: 59  EPPEQAAPVEPEAPAELIVRLAPFEVTEVAPGDLSETLRVTGSLTPSRQVHLSAEVSARL 118

Query: 192 LSSHQKDLTMMKN---LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           L    ++   +K    L + + VS     + +    +S  E       Q        +  
Sbjct: 119 LDVTVREGDSVKEGALLAQFDVVS----LENQLAQAQSNAEATRVQFAQAQSDFERTQTL 174

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E +L     L+     L+Q +   A + + +   +   E+  + +P  G I   Q    
Sbjct: 175 VERDLAAPTALENAQSGLDQLRAQVAAQETSVQNAQTALEKARVTAPFDGVIAERQVD-P 233

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
             +     PL  IV       + A         + +G   T+R   + D     F   +E
Sbjct: 234 GAFVATGSPLFTIV-DLTSLEVEATAPVSISNQITEGQIVTLRVEGFGDQT---FTGEVE 289

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           +++P+        +    Y        +A  + N  LR G  A    T +  +
Sbjct: 290 RLNPMAIS---GSRMLPVY--------IALENTNGALRGGMFATGRITLEEKS 331



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 41/133 (30%), Gaps = 7/133 (5%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +  ++  +G +          S   S  +    V  G  + +G  L  F+ +   + +  
Sbjct: 92  LSETLRVTGSLTPS--RQVHLSAEVSARLLDVTVREGDSVKEGALLAQFDVVSLENQLAQ 149

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            + + +  R      +S  +    +   L +   +    L +         ++V     S
Sbjct: 150 AQSNAEATRVQFAQAQSDFE----RTQTLVERDLAAPTALENAQSGLDQLRAQVAAQETS 205

Query: 159 SVYRSLKMKLTRM 171
                  ++  R+
Sbjct: 206 VQNAQTALEKARV 218


>gi|313202754|ref|YP_004041411.1| secretion protein hlyd family protein [Paludibacter propionicigenes
           WB4]
 gi|312442070|gb|ADQ78426.1| secretion protein HlyD family protein [Paludibacter propionicigenes
           WB4]
          Length = 331

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 67/211 (31%), Gaps = 16/211 (7%)

Query: 16  SLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            L  + LL +IG I   I ++  +  + +V +S  +     ++       G I K  VE 
Sbjct: 12  PLGAVILLVVIGSIYWYIDYASYIKTDDAVVASDNVSVSPKIM-------GRISKQYVEE 64

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L   + ++          S      +    ++   F      VLE A E  
Sbjct: 65  GDSVKEGQLLAEIDSVDLLAQKQQVLASKVQTEANKVQTEAKYQFDQKNIKVLEIALEKA 124

Query: 135 EEQLLDFLGKYHSTCSKVFNYG-----ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           +E       +Y    +    Y        +    L     ++          E   +  +
Sbjct: 125 KEDFARSKAQYSGGVTTKEQYEHSLKTQETAQAQLDAAKAQLLVSKTQIKSAETAIASAQ 184

Query: 190 ALLSSHQKDLTMMKNLFE--KNAVSQNDLNQ 218
           A +      L+  + L+      V++  L  
Sbjct: 185 AQIGVISTQLSNTR-LYAPVSGVVAKRWLLA 214



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/313 (11%), Positives = 102/313 (32%), Gaps = 25/313 (7%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
               ++     V+     S   +++  + K +         G           L + + +
Sbjct: 30  DYASYIKTDDAVVASDNVSVSPKIMGRISKQYVEEGDSVKEGQLLAEIDSVDLLAQKQQV 89

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
             +++  E       A     QK++ +++   EK          Q      +  +   ++
Sbjct: 90  LASKVQTEANKVQTEAKYQFDQKNIKVLEIALEKAKEDFARSKAQYSGGVTTKEQYEHSL 149

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             Q+     ++    +  +            ++  +   A   +++ ++        + +
Sbjct: 150 KTQETAQAQLDAAKAQLLVS--------KTQIKSAETAIASAQAQIGVISTQLSNTRLYA 201

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P++G +V  +   + + AQ SQ +  I  ++   +I   +   +++ +  G  A      
Sbjct: 202 PVSG-VVAKRWLLAGDIAQPSQSIYTIN-NNSKFWILVYLEETKMETLHVGQKAKFTLDT 259

Query: 355 YADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKI--------TDLAFSDNN 402
           Y D+    F   +  +    + Q      N  +  + +V  ++        T+     ++
Sbjct: 260 YPDV---VFTGKVFTVGSTTASQFSLIPPNNASGNFTKVTQRVAIKISIDGTEGQKQLSS 316

Query: 403 IELRNGFPAEVLF 415
            +L  G  A V  
Sbjct: 317 FKLLTGMSAVVKI 329


>gi|226525267|gb|ACO70867.1| secretion protein HlyD family protein [uncultured Verrucomicrobia
           bacterium]
          Length = 363

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 75/282 (26%), Gaps = 38/282 (13%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 +     +      L      +            K     A  +  + D   ++ 
Sbjct: 108 LFRLDPRDHEAKLQQAEAQLAQSDALIDFAKTQIAGAHAKIDQAEAEATKAEADFKRVEE 167

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      S+ + +  +     +   L         M   +                    
Sbjct: 168 LSRNKVASKQEFDAAKAARESANASLVSTKASAAGMQSGV-------------------- 207

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           ++   QR  A+   +L          TI +P++G     ++     Y Q  Q L+ IV  
Sbjct: 208 EVALAQRRTAET--QLENARLQLSYNTITAPVSGR-TSKRNAELGTYVQPGQTLIAIV-- 262

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNN 380
               +I A     Q+  ++ G  A +            FK  +E   P    Q      +
Sbjct: 263 EPEVWIEANFKETQLAKMRLGQAADITIDALPGHT---FKGTVESFSPASGAQFAMLPPD 319

Query: 381 LQTQEYYE------VILKITDLAFSDNNIELRNGFPAEVLFT 416
             T  + +      V +++   +       LR G  A V   
Sbjct: 320 NATGNFTKVVQRVPVRVRLEPESIRGYEDRLRAGLSAVVAVR 361



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 51/154 (33%), Gaps = 5/154 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  + +   G I +  VE  +++  G  L   +  +    +   +  +      ID
Sbjct: 76  VTSHVHSVNAHVGGTISEVLVEPNTEVKAGDVLFRLDPRDHEAKLQQAEAQLAQSDALID 135

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             K+ +   + K D  E      E     ++ L +      + F+   ++   +    ++
Sbjct: 136 FAKTQIAGAHAKIDQAEAEATKAEADFKRVEELSRNKVASKQEFDAAKAARESANASLVS 195

Query: 170 RMRSIYLNRLDLE---NKSSLLRALLSSHQKDLT 200
              S    +  +E    +       L + +  L+
Sbjct: 196 TKASAAGMQSGVEVALAQRRTAETQLENARLQLS 229


>gi|153953717|ref|YP_001394482.1| hypothetical protein CKL_1092 [Clostridium kluyveri DSM 555]
 gi|219854337|ref|YP_002471459.1| hypothetical protein CKR_0994 [Clostridium kluyveri NBRC 12016]
 gi|146346598|gb|EDK33134.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219568061|dbj|BAH06045.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 425

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 70/221 (31%), Gaps = 33/221 (14%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +      Q      ++L+   A S+ +L+  +  +  +++ L         + + I    
Sbjct: 153 KISYDDAQSSYNRTESLYSSGAASKQELDTAKTKLDSASVTLSSAQQNLSLIQQKIG--- 209

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E+       + +    ++  Q    D                I +PI+G I        
Sbjct: 210 PESVAVAQAQVTQAQAAVDSIQSQIND--------------TIIKAPISGIISAVNIH-E 254

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
              +  +   + I+       I A V    +  +K   +  V  P  ++   K+    IE
Sbjct: 255 GEISPTATASITII-DLSSLIIEANVPGNMLSKIKVNQSIPVTIPSLSN---KEITGSIE 310

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            I+P              Y + +K+      ++  +L+ G 
Sbjct: 311 TINPDADSTTKE------YLIKIKVP-----NSGGDLKPGM 340



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 65/156 (41%), Gaps = 5/156 (3%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  +   V+ SG++  ++ V  +     G +K   V+ GS +  G  L T +       +
Sbjct: 58  LSSLSTDVNYSGKLTAKEEV-SVSPKSPGKVKTLNVKVGSTVKSGETLFTLDSDSLQAQL 116

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++ SI + + +++  KS+   +  +    ++A +S +    D    Y+ T S      
Sbjct: 117 KQQQASIDSAKANLNKTKSS--GVEQQVVQAQQAVDSAKISYDDAQSSYNRTES--LYSS 172

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            ++  + L    T++ S  +     +   SL++  +
Sbjct: 173 GAASKQELDTAKTKLDSASVTLSSAQQNLSLIQQKI 208


>gi|332519162|ref|ZP_08395629.1| efflux transporter, RND family, MFP subunit [Lacinutrix algicola
           5H-3-7-4]
 gi|332045010|gb|EGI81203.1| efflux transporter, RND family, MFP subunit [Lacinutrix algicola
           5H-3-7-4]
          Length = 389

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 88/246 (35%), Gaps = 11/246 (4%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           +K + +EK  ES   + +        T        I  +   +K   T      +     
Sbjct: 20  DKKNTVEKVIESNNLENIRTKRAELVTEQDAIQSKIKQLDAKIKTLDTTQNVPLITTFKA 79

Query: 182 ENKS--SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL-ELRENIHEQK 238
           + +    +L    +   K L  +   F    ++   + + +R+     L ++ +    Q+
Sbjct: 80  KEEVFNHVLELQGNVTTKKLLTITPEF-SGILTNVYVKEGQRVSKGQILAKIDDGGLSQQ 138

Query: 239 NMLRHINELYDEANLEFANYL--KEISRDLE--QNQRTFADEMSKLTILEKTREQKTILS 294
                I     +   E    L  ++I  +++  Q + ++  +   +  L++   + T+ +
Sbjct: 139 LAQVKIQSALSKTTFERQERLWNQKIGSEIQYLQAKSSYEAQQEAVNQLQQQINKTTVRA 198

Query: 295 PIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           P +GTI  +      +     Q PLM+IV  S   YI   V    +  V KG   TV FP
Sbjct: 199 PFSGTI-DDVITEKGSVVGAGQTPLMQIVNLSD-MYIETDVPESYLPFVTKGKDVTVEFP 256

Query: 354 HYADIR 359
                 
Sbjct: 257 VLNKTI 262



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 53/139 (38%), Gaps = 5/139 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED---IETTDLIDLKKVSI 103
            G +     ++ I   FSGI+    V+ G ++ +G  L   +D    +    + ++    
Sbjct: 91  QGNVT-TKKLLTITPEFSGILTNVYVKEGQRVSKGQILAKIDDGGLSQQLAQVKIQSALS 149

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV-FNYGISSVYR 162
           K      +   +       +Y   + ++E+++E +     + + T  +  F+  I  V  
Sbjct: 150 KTTFERQERLWNQKIGSEIQYLQAKSSYEAQQEAVNQLQQQINKTTVRAPFSGTIDDVIT 209

Query: 163 SLKMKLTRMRSIYLNRLDL 181
                +   ++  +  ++L
Sbjct: 210 EKGSVVGAGQTPLMQIVNL 228


>gi|329964404|ref|ZP_08301485.1| efflux transporter, RND family, MFP subunit [Bacteroides fluxus YIT
           12057]
 gi|328525453|gb|EGF52501.1| efflux transporter, RND family, MFP subunit [Bacteroides fluxus YIT
           12057]
          Length = 410

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 74/222 (33%), Gaps = 19/222 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDL 266
             +++ D    +  +            E +   +    N+   E  L      ++   + 
Sbjct: 86  QLIAEMDRVTLQSELASQRAAYNGAKAEYEYQQKNYERNKGLHEKQLISDTDYEQSLYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ + ++    + L   E+     TI SPI G ++  +   +            L  I  
Sbjct: 146 QKAKSSYESSQASLAKAERNLSYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQD 378
                 + A V    I  V++G  AT     Y +     F+ ++ +I         S   
Sbjct: 205 DLTQMQVVADVDEADIGGVEEGQRATFTVDAYPND---VFEGVVTQIRLGDATSSSSSST 261

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           ++  T   YEV++     +  + +++L+    A V     + 
Sbjct: 262 SSSSTVVTYEVVI-----SAHNPDLKLKPRLTANVTIYTLDR 298



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 53/137 (38%), Gaps = 4/137 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  SV+++G I     V E+ +  SGII K  V+  S + +G  +   + +     + 
Sbjct: 43  GEISESVTATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSVVTKGQLIAEMDRVTLQSELA 101

Query: 98  LKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            ++ +    +   + ++   +    L+ K  + +  +E            Y S+ + +  
Sbjct: 102 SQRAAYNGAKAEYEYQQKNYERNKGLHEKQLISDTDYEQSLYNYQKAKSSYESSQASLAK 161

Query: 155 YGISSVYRSLKMKLTRM 171
              +  Y ++   +  +
Sbjct: 162 AERNLSYATITSPIDGV 178


>gi|312891979|ref|ZP_07751481.1| secretion protein HlyD family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311295537|gb|EFQ72704.1| secretion protein HlyD family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 355

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 99/303 (32%), Gaps = 31/303 (10%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E     R + LL      +    +     +++         + + ++       + + + 
Sbjct: 73  ENQDVKRGDTLLVIDNSEYQLQQQEAEAALANARAQQLALNSNVATLGKTSQVSQWQIAA 132

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            RA L   Q++    K L++  + +   L   +  +  +  + +  +   +  L  +N+ 
Sbjct: 133 ARARLWKQQQEYARYKKLYDVESATLQQLENVQTALEVARSDYQSALDNYQASLSRVNDT 192

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +  +  A             +R      +KL +         I +P  G +   ++  
Sbjct: 193 RVQKEVLLAEI----------TRRQAILNRNKLDV-----GYTVIRAPYNGKM-GRRTIQ 236

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  Q L  IV      ++ A     Q++H+  G  A +    +     K+FK  I
Sbjct: 237 PGQQIQAGQTLAFIVDREAGKWVIANFKETQVRHMHVGQAALIETDAFP---GKQFKGSI 293

Query: 368 EKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDNNIELRNGFPAEVLFTA 417
             + P           +  T  Y +      V +++TD A + +   L  G  A V    
Sbjct: 294 ISVSPATGSSFSLLPPDNSTGNYVKIVQRIPVRIRLTDSASTIS--ALSAGMNALVTIPK 351

Query: 418 KNT 420
            N 
Sbjct: 352 NNR 354



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 10/209 (4%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A +  + LL++I    +  W  L   E +  +      ++ +  + S   G I++ + E 
Sbjct: 19  AWIAGIILLALIFWGAISVW-NLCFYEETNDAQ----VQEYINPVTSRVGGYIREIRYEE 73

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  LL  ++ E        + ++ N R       S +  L     V +    + 
Sbjct: 74  NQDVKRGDTLLVIDNSEYQLQQQEAEAALANARAQQLALNSNVATLGKTSQVSQWQIAAA 133

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             +L     +Y       +         +L+       ++ + R D ++     +A LS 
Sbjct: 134 RARLWKQQQEYAR-----YKKLYDVESATLQQLENVQTALEVARSDYQSALDNYQASLSR 188

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                   + L  +    Q  LN+ +  V
Sbjct: 189 VNDTRVQKEVLLAEITRRQAILNRNKLDV 217


>gi|86750991|ref|YP_487487.1| secretion protein HlyD [Rhodopseudomonas palustris HaA2]
 gi|86574019|gb|ABD08576.1| Secretion protein HlyD [Rhodopseudomonas palustris HaA2]
          Length = 424

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 82/271 (30%), Gaps = 26/271 (9%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV-----SQN 214
           + R  ++     + I +   +LE         +   +  +  ++ L +  A      +Q 
Sbjct: 97  LVREGEVVREGQKLIAIEASELEAAVVQAEGAVQQAEARVRQLRELTKPAADQSLQQAQA 156

Query: 215 DLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKE--ISRDLEQN 269
           +L   E    +++              +  R++N    +             +  D    
Sbjct: 157 NLLNAEAAYERASKLAAGGFGTRATLDDATRNLNVARTQVRTAELQVYTSSPVGSDFVMA 216

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   A   + L   +      +I +P  G ++  +     +  Q  + L+ + P      
Sbjct: 217 ETQLAQARATLNTTQARLGYASITAPRDG-VLITRKVERGSVVQPGKALLVLAPAGDSQI 275

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +  ++  K +  +  G  A      Y D   K+F A +  I+P +               
Sbjct: 276 V-VQIDEKNLGQLALGQHALASADAYPD---KRFAARLSYINPSVDIN----------RA 321

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            ++I  LA  D    LR      V       
Sbjct: 322 SVEI-KLAVIDPPDYLRQDMTVSVDIATARR 351



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 60/172 (34%), Gaps = 12/172 (6%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  SV +SG I      VEI S  +G +    V  G  + +G  L+  E  E    + 
Sbjct: 65  ADLVQSVVASGHIETP-YRVEIGSQITGTVADVLVREGEVVREGQKLIAIEASELEAAVV 123

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + +++     +   +       ++     +A     E   +   K  +         +
Sbjct: 124 QAEGAVQQAEARVRQLRELTKPAADQSLQQAQANLLNAEAAYERASKLAAGGFGT-RATL 182

Query: 158 SSVYRSLKMKLTRMRSIYLNR----------LDLENKSSLLRALLSSHQKDL 199
               R+L +  T++R+  L            +  E + +  RA L++ Q  L
Sbjct: 183 DDATRNLNVARTQVRTAELQVYTSSPVGSDFVMAETQLAQARATLNTTQARL 234


>gi|300716017|ref|YP_003740820.1| multidrug resistance protein K [Erwinia billingiae Eb661]
 gi|299061853|emb|CAX58969.1| Putative multidrug resistance protein K [Erwinia billingiae Eb661]
          Length = 384

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/357 (9%), Positives = 101/357 (28%), Gaps = 75/357 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E + + I    SG + + +V +  ++ +G  L+  +                        
Sbjct: 80  ESDAITIAPKASGYVTELRVRDNQRVKKGDLLVVIDP----------------------- 116

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                                      D   +     ++     ++ ++++         
Sbjct: 117 --------------------------RDNKAQRDQAQAQ-LGLAVAQLHQAQASLELSKV 149

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                +     + +  +A   + Q+D    +         +      +R +  +  +LR 
Sbjct: 150 QYPAQKDQAVAQQAKAQANYMNAQEDYRRQR-----GVDPRA---TSQRNIDAANSQLRS 201

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              E ++    +     E   +    +++   ++E  Q+      ++L           +
Sbjct: 202 AAAELESAKAQV-----EVASQIKLQIRQQETNVEARQQQVEQAQAQLNTANLNLSYTEV 256

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +            Q    L  +V      +I A     Q++ +K G    +  
Sbjct: 257 RAPYDGFVTKRNV-QVGTLVQAGTALFSLVSPD--VWITANFKESQLERMKPGDKVDITV 313

Query: 353 PHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             + +++    +  ++ I         +    N     Y +++ ++      D  ++
Sbjct: 314 DAWPNMK---LEGHVDSIQMGSGSRFSTFPSENATGN-YVKIVQRVPVKIVIDKGLD 366


>gi|237808502|ref|YP_002892942.1| secretion protein HlyD family protein [Tolumonas auensis DSM 9187]
 gi|237500763|gb|ACQ93356.1| secretion protein HlyD family protein [Tolumonas auensis DSM 9187]
          Length = 396

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 87/269 (32%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
              +   +L   + ++RS++ N    +   +  +  L   + DL+  KN+ +   +SQ +
Sbjct: 97  AFDTAEANLAQAVRQVRSMFNNTEQAKAVVAEQKIALRKAETDLSRRKNMVKAGGLSQEE 156

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L+  +  V  +   L     + K     I       +    N +                
Sbjct: 157 LSHAQDTVNSAEKALAVAEQQMKAQEALIVNTNVSTHPLVKNAI---------------- 200

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             ++L      +++  +++P++G I                 LM ++P     ++ A   
Sbjct: 201 --AQLRQAYLAKQRTALIAPVSGYIARRNV-QVGQRVNPGSALMAVIPLD-QVWVDANFK 256

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQ-----E 385
             Q+  ++ G  AT+    Y D    ++   +E +              N         +
Sbjct: 257 ETQLTGMRIGQPATITADLYGDKV--EYHGTVESLGIGTGSAFSLLPAQNATGNWIKVVQ 314

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
              V +++       + + +      +V 
Sbjct: 315 RLPVRIQLDAEELKAHPLRVGLSMLVDVD 343



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 65/187 (34%), Gaps = 10/187 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N+V+I     G +     ++G  +++G  L+ F++ +     D  + ++      + 
Sbjct: 54  VNGNLVQITPEIVGTVTSITADDGDYVVKGQELVRFDNSDADIAFDTAEANLAQAVRQVR 113

Query: 112 -----TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                TE++       K  + +   +    + +   G             ++S  ++L +
Sbjct: 114 SMFNNTEQAKAVVAEQKIALRKAETDLSRRKNMVKAGGLSQEELSHAQDTVNSAEKALAV 173

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-----KNAVSQNDLNQQER 221
              +M++     ++    +  L     +  +   + K            +++ ++   +R
Sbjct: 174 AEQQMKAQEALIVNTNVSTHPLVKNAIAQLRQAYLAKQRTALIAPVSGYIARRNVQVGQR 233

Query: 222 IVYKSTL 228
           +   S L
Sbjct: 234 VNPGSAL 240


>gi|118497861|ref|YP_898911.1| membrane fusion protein [Francisella tularensis subsp. novicida
           U112]
 gi|194323834|ref|ZP_03057610.1| HlyD family secretion protein, putative [Francisella tularensis
           subsp. novicida FTE]
 gi|254373216|ref|ZP_04988705.1| HlyD family secretion protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|118423767|gb|ABK90157.1| membrane fusion protein [Francisella novicida U112]
 gi|151570943|gb|EDN36597.1| HlyD family secretion protein [Francisella novicida GA99-3549]
 gi|194322198|gb|EDX19680.1| HlyD family secretion protein, putative [Francisella tularensis
           subsp. novicida FTE]
          Length = 341

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 64/206 (31%), Gaps = 13/206 (6%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL- 230
           +   L      +K    +  L+  Q+ +    N+ + N             +    ++L 
Sbjct: 96  KDYQLKVAQANSKVIQAKGQLAIAQEQV----NVAKSNLTKAQSSLDTATSMADRYIKLY 151

Query: 231 RENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +++    ++  ++IN+       +   Y  LK+    +E  +                  
Sbjct: 152 KDDAGSLQDAQKYINQKIQAQKAKDEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLG 211

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             T+++P  G +   + +         Q L   +  +K  +I A      +  +K G   
Sbjct: 212 YTTLIAPDDGYVSNLKLY-KGQLVSPGQALFGFI-DNKKWWIDANFKETDLDRIKPGQKV 269

Query: 349 TVRFPHYADIREKKFKAIIEKIDPII 374
            +    Y+      +   ++ I    
Sbjct: 270 EIELDMYSHS----YAGKVDSISYAT 291



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 57/185 (30%), Gaps = 10/185 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
              +++ I     G I+K  + N   + +G  L+  E         +    +   K  + 
Sbjct: 58  VNADIISISPKVGGYIEKVYIHNNQFVHKGDKLVQIEPKDYQLKVAQANSKVIQAKGQLA 117

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +  ++  KS L    +  D    +   R  +L            K  N  I +  ++ 
Sbjct: 118 IAQEQVNVAKSNLTKAQSSLDT-ATSMADRYIKLYKDDAGSLQDAQKYINQKIQA-QKAK 175

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIV 223
               + ++   L     + +    +    +   +L     +  +   VS   L + + + 
Sbjct: 176 DEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLGYTTLIAPDDGYVSNLKLYKGQLVS 235

Query: 224 YKSTL 228
               L
Sbjct: 236 PGQAL 240


>gi|121595029|ref|YP_986925.1| RND family efflux transporter MFP subunit [Acidovorax sp. JS42]
 gi|120607109|gb|ABM42849.1| efflux transporter, RND family, MFP subunit [Acidovorax sp. JS42]
          Length = 538

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 101/301 (33%), Gaps = 41/301 (13%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             +E  +E+      +   +  K+   G+ +   SL+     +R+      D E ++  +
Sbjct: 82  PVYEGEQEEAETNSNQIRISTEKIQKLGVRTEAVSLRSLDKVVRAAGRIEPD-ERQTFTI 140

Query: 189 RALLSSHQKDLTMM---------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            A    + + L +          + LFE   V   +L   +R    +   +         
Sbjct: 141 AAKFEGYVERLHVNVTGQAVSKGQPLFE---VYSPELVSAQREYAIAAQGVDALKGASGE 197

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
             R + EL D +     N+      D+   Q         L    ++R   T  SP+ G 
Sbjct: 198 AQRGMRELADSSLARLRNW------DISDEQVKA------LAKSGESRRTLTFRSPVTGI 245

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I   ++            L ++   S +  I A V  + I  VK G  A V+   Y D  
Sbjct: 246 ITDKKAV-QGMRFMPGDMLYQVANLSSVWVI-ADVFEQDIGLVKLGGKAKVQINAYPD-- 301

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            K F+  +  + P +  +           V +++     S+    L+ G  A+V     +
Sbjct: 302 -KVFQGTVSYVYPTLKPETRT--------VQVRVD---LSNTGGLLKPGMFAQVELPTAS 349

Query: 420 T 420
            
Sbjct: 350 K 350



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 45/127 (35%), Gaps = 5/127 (3%)

Query: 40  IEISVSSSGEILNE-DNVVEIKSPFSGIIKKFQVE-NGSQILQGTPLLTF---EDIETTD 94
           ++  V ++G I  +      I + F G +++  V   G  + +G PL      E +    
Sbjct: 120 LDKVVRAAGRIEPDERQTFTIAAKFEGYVERLHVNVTGQAVSKGQPLFEVYSPELVSAQR 179

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
              +    +  L+      +  +  L +      + ++  +EQ+        S  +  F 
Sbjct: 180 EYAIAAQGVDALKGASGEAQRGMRELADSSLARLRNWDISDEQVKALAKSGESRRTLTFR 239

Query: 155 YGISSVY 161
             ++ + 
Sbjct: 240 SPVTGII 246


>gi|16762718|ref|NP_458335.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29144205|ref|NP_807547.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213052108|ref|ZP_03344986.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213615869|ref|ZP_03371695.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213851865|ref|ZP_03381397.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289824344|ref|ZP_06543937.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|25323921|pir||AG0989 probable HlyD family secretion protein STY4223 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16505024|emb|CAD08043.1| putative HlyD family secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29139842|gb|AAO71407.1| putative HlyD-family secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 355

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 19/300 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F  + E L     +            I     ++      +          ++  
Sbjct: 63  VSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSEMRAAQSVV 122

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L S  K     ++L ++ AVS   L+        +   L     +       I 
Sbjct: 123 KQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESARAALETAKAQVSAAKAAIE 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                 Q +   A    +  + +   +   + +P  G + Y + 
Sbjct: 183 AARTSIIQ-------------AQTRVEAAQATERRIVAD--IDDSELKAPRDGRVQY-RV 226

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +Q   +K G  A +      D+R     +
Sbjct: 227 AEPGEVLSAGGRVLNMVDLSD-VYMTFFLPTEQAGLLKIGGDARLVLDAAPDLRIPATIS 285

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            +  +     +  + ++ + +  + V  +I       +   ++ G P             
Sbjct: 286 FVASVAQFTPKTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLDERVPW 345


>gi|225628901|ref|ZP_03786935.1| HlyD family secretion protein [Brucella ceti str. Cudo]
 gi|225616747|gb|EEH13795.1| HlyD family secretion protein [Brucella ceti str. Cudo]
          Length = 338

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 49/396 (12%), Positives = 114/396 (28%), Gaps = 85/396 (21%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M+LL +I  +  +  +            GE +    +   +      ++   V+ G ++ 
Sbjct: 25  MSLLCVIPFVSSLFAACGTQSLAVGYVEGEFVQLAPLQVAQ------VRDIAVKRGDRVE 78

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P+ T ED +                  I   ++       +  +       R E++ 
Sbjct: 79  AGEPIATVEDTD----------------ARIAVAQAEAALAQAQVQLANLQVGKRPEEIA 122

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                                    LE      RA     Q+ L
Sbjct: 123 V----------------------------------------LEAAVRSARAQADDAQRTL 142

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++L  +   +Q  L+     +  +   + ++       +  +    +E         
Sbjct: 143 LRTRDLARRGVATQAQLDDAATQLEVAEAAIGQSTANL--AVGKLPARPEEIKA------ 194

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                     +       ++L   +  R Q+TI +P AG I      +  + A  S P++
Sbjct: 195 ---------AENAVKSAEAQLQTAKWQRAQRTIEAPAAGRITDV-VRNPGDIAGPSAPVL 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++P      ++  +  ++   V  G         + D      +A +  + P       
Sbjct: 245 TMLP-DGAVKLKVYIPEERFSDVAVGSV----LSVHCDGCAPGLQARVSYVSPDPEFTPP 299

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + + E  + ++ + +    D    L+ G   +V  
Sbjct: 300 VIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 335


>gi|167626197|ref|YP_001676491.1| RND family efflux transporter MFP subunit [Shewanella halifaxensis
           HAW-EB4]
 gi|167356219|gb|ABZ78832.1| efflux transporter, RND family, MFP subunit [Shewanella
           halifaxensis HAW-EB4]
          Length = 409

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 87/285 (30%), Gaps = 40/285 (14%)

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           +           ++V+ S   K   M       LD  +  +  +A        +     L
Sbjct: 99  NPQLDSALQQAETNVHNSRTTKRKLMLEQQRELLDQASSLAEFKADAEIANLQVEAESPL 158

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +  +S  D+    R+      +L E +   ++ L  + E++ E  L     +K+   +
Sbjct: 159 AAEGIISAMDM----RLSRLRAKQLNERLKLGQDKLGKLREVHAEHLLIQTEIIKQAESE 214

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L                 +  REQ  + + I G +                 L  +V   
Sbjct: 215 LA--------------TAQNRREQLVVRAGIEGVLQRLPI-KLGQSVNVGDELA-LVGSL 258

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
                  KV    IQ V+ G  A +      D R       + ++DP++SQ         
Sbjct: 259 SPLIAEIKVPQMLIQLVRHGAKADI------DTRSGIVSGQVIRVDPVVSQG-------- 304

Query: 386 YYEVILKITDLAFSDNNIELRNGFP-AEVLFTAKNTTLAQEIIHP 429
                +++      + + ++R      + +   K+      +  P
Sbjct: 305 ----AVRVDIQLLDEISSDIRP-MQMVDAVIFGKSRAQVNYVDKP 344


>gi|37520064|ref|NP_923441.1| hypothetical protein gll0495 [Gloeobacter violaceus PCC 7421]
 gi|35211056|dbj|BAC88436.1| gll0495 [Gloeobacter violaceus PCC 7421]
          Length = 436

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 90/289 (31%), Gaps = 39/289 (13%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +++    RE Q+L  +       S+V     +    + + +  R          +     
Sbjct: 89  VDQGDAVREGQVLAQMDASR-IVSEVAAAKAARDLAAAQYQEARNGFRPQEIDQVRADLR 147

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +A +     +L   + LF + A+++  +  +     ++   L+     Q+    +   
Sbjct: 148 AAQANVDIAGNNLVREERLFTERAIAETQVINRRLEFSRAQDALK---AAQEKFSLYKAG 204

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI------ 300
             +E  L     L +       N+   AD               TI +P +G I      
Sbjct: 205 TRNEQVLAAKARLDQAEATYRNNRTRLADL--------------TIRAPFSGIISQRYAQ 250

Query: 301 ----VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
               V     +S + A  S  L+ I        + A V    I  +K G    +    Y 
Sbjct: 251 PGAFVSPTVNTSGDSANSSSILLLI----DRLEVLATVAESDIARIKVGQPVQITTSAYP 306

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
                 FK  +  + P    +    Q    ++V +++ D A       L
Sbjct: 307 GT---VFKGTVRLVAPEAVTESGITQ----FQVRVRLDDEAARTLKSRL 348



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 52/169 (30%), Gaps = 22/169 (13%)

Query: 41  EISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI--- 96
           ++ ++S+G++    N    +    +G++ K  V+ G  + +G  L   +       +   
Sbjct: 59  DVRITSAGQVAP--NRKVNVGPKEAGLLTKLYVDQGDAVREGQVLAQMDASRIVSEVAAA 116

Query: 97  ----------------DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
                             +   I  +R  +   ++ +D   N     E+ F  R      
Sbjct: 117 KAARDLAAAQYQEARNGFRPQEIDQVRADLRAAQANVDIAGNNLVREERLFTERAIAETQ 176

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            + +             +    SL    TR   +   +  L+   +  R
Sbjct: 177 VINRRLEFSRAQDALKAAQEKFSLYKAGTRNEQVLAAKARLDQAEATYR 225


>gi|170746840|ref|YP_001753100.1| multidrug resistance efflux pump-like protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653362|gb|ACB22417.1| multidrug resistance efflux pump-like protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 340

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 73/205 (35%), Gaps = 20/205 (9%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE--QNQRTF 273
           L +      +   E+       K     +++  + A   F       +  +   + +   
Sbjct: 104 LKRLGAEREQIEAEIAAADQAVKVAESQVSQTREAAEKGFVTRRNFEAAQIRVAEQRAKL 163

Query: 274 ADEMSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           A+  +KL+ LE T  +++   + +P  G +++  + ++         L  + PH+    +
Sbjct: 164 AESKAKLSRLEVTLNRQSAQLVRAPRDGRVLHINAAAAGALVNAGDTLATLAPHAPERVV 223

Query: 331 RAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V  + +  ++ G +          ++F  +  +    F   +  IDP       + Q
Sbjct: 224 ELMVDGRDVALIRPGQSVRLAFEGWPAIQFSGWPSVAHGMFDGRVRAIDP-------SAQ 276

Query: 383 TQEYYEVILKITDLAFSDNNIELRN 407
               + V+++    + +  +++   
Sbjct: 277 PSGRFRVLVEQDAGSSAWPDVDFIP 301



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 70/181 (38%), Gaps = 11/181 (6%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVV 57
           +H F      R  P ++  +  +  +G +  +   + +P   + + +G ++     D V 
Sbjct: 8   LHRFPTLTAIRP-PRAVVVLGWIIGLGTVVAVLLLLYVPWVQTSAGTGRVIAPNPADRVQ 66

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            + +   G ++ + VE+G ++  G P+    D +           +   R  I+ E +A 
Sbjct: 67  TVTALVQGRVEHWYVEDGQRVRAGDPIARLVDNDP-----FLLKRLGAEREQIEAEIAAA 121

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D      +   +  ++RE     F+ + +   +++      +     K KL+R+      
Sbjct: 122 DQAVKVAE--SQVSQTREAAEKGFVTRRNFEAAQIRVAEQRAKLAESKAKLSRLEVTLNR 179

Query: 178 R 178
           +
Sbjct: 180 Q 180


>gi|15598500|ref|NP_251994.1| hypothetical protein PA3304 [Pseudomonas aeruginosa PAO1]
 gi|107102834|ref|ZP_01366752.1| hypothetical protein PaerPA_01003902 [Pseudomonas aeruginosa PACS2]
 gi|116051319|ref|YP_789849.1| hypothetical protein PA14_21290 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890502|ref|YP_002439366.1| putative membrane fusion protein [Pseudomonas aeruginosa LESB58]
 gi|254236267|ref|ZP_04929590.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254241991|ref|ZP_04935313.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296388196|ref|ZP_06877671.1| putative membrane fusion protein [Pseudomonas aeruginosa PAb1]
 gi|313108648|ref|ZP_07794647.1| putative membrane fusion protein [Pseudomonas aeruginosa 39016]
 gi|9949432|gb|AAG06692.1|AE004752_8 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115586540|gb|ABJ12555.1| putative membrane fusion protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168198|gb|EAZ53709.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126195369|gb|EAZ59432.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218770725|emb|CAW26490.1| putative membrane fusion protein [Pseudomonas aeruginosa LESB58]
 gi|310881149|gb|EFQ39743.1| putative membrane fusion protein [Pseudomonas aeruginosa 39016]
          Length = 285

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 76/224 (33%), Gaps = 30/224 (13%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF------ANYLKEISRDLEQN 269
           L + ++  Y++ LE    + E ++    + +               A   +    +    
Sbjct: 71  LMRIDQERYQANLEQARAVAETRHQQYLLRQNEAARRSRLGIGAISAEDKENAQINAAIA 130

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +  + + ++++ I E   ++  + +   G +   +  +  NYA   Q +M +V   +  Y
Sbjct: 131 RSEYQEALAQVKIAELNLKRSELRAARNGQVTNLRL-AQGNYATAGQAVMALV-DQQSFY 188

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----- 384
           + A     ++  ++ G  A VR               +E I   I+ +++    Q     
Sbjct: 189 VVAYFEETKLPGIRVGMRAQVRLMSGDQ----PIDGTVESISSGITDRNSTPDGQLLANV 244

Query: 385 ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                     +   V +++  +     ++ L  G  A V     
Sbjct: 245 EPTFNWVRLAQRIPVRIRLDQV---PADVHLSAGMTASVTVQGD 285



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 54/185 (29%), Gaps = 8/185 (4%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN------LRCHIDTEKSAL 117
           SG +   +V++   +  G  L+  +       ++  +   +       LR +    +S L
Sbjct: 51  SGWVTDLEVKDNQVVKVGDVLMRIDQERYQANLEQARAVAETRHQQYLLRQNEAARRSRL 110

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                  +  E A  +      ++            N   S +  +   ++T +R    N
Sbjct: 111 GIGAISAEDKENAQINAAIARSEYQEALAQVKIAELNLKRSELRAARNGQVTNLRLAQGN 170

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNL--FEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                     L    S +         L        +Q  L   ++ +  +   +   I 
Sbjct: 171 YATAGQAVMALVDQQSFYVVAYFEETKLPGIRVGMRAQVRLMSGDQPIDGTVESISSGIT 230

Query: 236 EQKNM 240
           ++ + 
Sbjct: 231 DRNST 235


>gi|121635544|ref|YP_975789.1| multidrug resistance translocase [Neisseria meningitidis FAM18]
 gi|120867250|emb|CAM11019.1| multidrug resistance translocase [Neisseria meningitidis FAM18]
          Length = 418

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 137 NELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 196

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 197 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 239

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 240 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 297

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 298 MKIGQPAEL 306



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 88  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELIQAVRQNR 147

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 148 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 207

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 208 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRT 248


>gi|149369682|ref|ZP_01889534.1| membrane fusion efflux protein, putative [unidentified eubacterium
           SCB49]
 gi|149357109|gb|EDM45664.1| membrane fusion efflux protein, putative [unidentified eubacterium
           SCB49]
          Length = 426

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 79/263 (30%), Gaps = 50/263 (19%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             ++        ++  + +   A L + + +    K L++K  +S++D ++         
Sbjct: 100 QAQLSQSQAGLQNVRAQLTNAEASLKNAKANYDRSKLLYDKGVISRSDWDRV-------- 151

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                 + + +         Y       AN  +                       +   
Sbjct: 152 ------VADYEMAQASKTSAYYNVQSSSANVKQ----------------------SQDNL 183

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPL-MKI--VPHSKLTYIRAKVTPKQIQHVKK 344
            +  I +P+ GTI              +Q    +I  V +     +   V    I  V  
Sbjct: 184 SRTEIYAPMTGTISKMSVELGERVVGTAQMAGTEIIRVANLDNMEVEVDVNENDIVKVAV 243

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD---- 400
           G +  V    +    +++FK ++ +I    ++    +     ++V ++I   ++ D    
Sbjct: 244 GDSTIVEVDAW---TKREFKGLVTEI-ANSAESTLTVDQVTNFKVKVRILPESYKDLTEG 299

Query: 401 ---NNIELRNGFPAEVLFTAKNT 420
              N    R G  A V       
Sbjct: 300 KPKNYSPFRPGMTATVDVITNKK 322



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 67/192 (34%), Gaps = 2/192 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +V+++G+I  E  V  + S  SG +   QV+ G  + +G  L+          +   
Sbjct: 48  ITETVAATGKIQPEIEV-SLSSEVSGEVIDLQVKEGQLVEKGQLLVKINPDLIQAQLSQS 106

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  ++N+R  +   +++L      YD  +  ++       D+            +   + 
Sbjct: 107 QAGLQNVRAQLTNAEASLKNAKANYDRSKLLYDKGVISRSDWDRVVADYEMAQASKTSAY 166

Query: 160 VYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                     +     L+R ++    +  +  +     + +     +     +   +L+ 
Sbjct: 167 YNVQSSSANVKQSQDNLSRTEIYAPMTGTISKMSVELGERVVGTAQMAGTEIIRVANLDN 226

Query: 219 QERIVYKSTLEL 230
            E  V  +  ++
Sbjct: 227 MEVEVDVNENDI 238


>gi|262172296|ref|ZP_06039974.1| membrane-fusion protein [Vibrio mimicus MB-451]
 gi|261893372|gb|EEY39358.1| membrane-fusion protein [Vibrio mimicus MB-451]
          Length = 365

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 84/262 (32%), Gaps = 19/262 (7%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               ++    + +     ++   ++ D   +     A     +    +   + +   V  
Sbjct: 42  QETQTAAEIQVPLAKVGYQTFTASQTDKVIELYGRTAPDRQAKIGAEIAGRIIDIKIVKG 101

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             + +++ I      +L   +   K  L  + +    A     N   +            
Sbjct: 102 QAVKKEQIIALIDKGDLDAQLERAKAQL-KVRQQEFNAASSLKNKGLQGEVAFTNAAAAL 160

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            D  S L+ +++      + +P  G +         ++     P+  I+       I A 
Sbjct: 161 TDAQSSLSTVQRLLANTQVRAPFDGLVETLPI-EKGDFVSIGDPVASII-DLHKLVIEAD 218

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V+ + IQHV+ G +A +RF     I     +  +  I  + S   N       + + +++
Sbjct: 219 VSERHIQHVQLGQSARIRF-----IDGSDTQGKVRYISRLSSPATNT------FAIEVEV 267

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
            +   +     +  G  AEV  
Sbjct: 268 DNPQQA-----IPAGVSAEVEL 284



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I   ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIELYGRTAPDRQAK-IGAEIAGRIIDIKIVKGQAVKKEQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 127 AQLKVRQ----QEFNAASSLKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLANTQVRAP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  L   L   +  +++  D       L  L+               +  +    L Q  
Sbjct: 183 FDGLVETLPIEKGDFVSIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLGQSA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGSDTQGKVRYISRL 253


>gi|261325148|ref|ZP_05964345.1| multidrug resistance protein mdtN [Brucella neotomae 5K33]
 gi|261301128|gb|EEY04625.1| multidrug resistance protein mdtN [Brucella neotomae 5K33]
          Length = 366

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 87  LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFNRVSA 146

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 147 LVHDKFEARAQFDQAERALQVAKQEQNVAASAAAATLAQLGGTLDKPLQQHASYLA---- 202

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 203 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFLAVGDPAFTLI-- 249

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 250 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITP 294



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/241 (10%), Positives = 70/241 (29%), Gaps = 24/241 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIK 60
           ++    HP   + + ++  +  I +  W             G+ ++ED+       V I 
Sbjct: 12  QDQSPKHPMLRRILLIVGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAIT 63

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG + +  V     + +G  L   +       +D  K ++      +    + L   
Sbjct: 64  PQVSGQVIRVAVGPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKL----AGLVLT 119

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +        +       +   +  +     F            +++ +          
Sbjct: 120 YKQQLASVAQAKDDVTFAQEQFNRVSALVHDKFEARAQFDQAERALQVAKQEQNVAASAA 179

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
               + L   L    Q+  +    L  K   ++ +L ++   + +        + + +N+
Sbjct: 180 AATLAQLGGTLDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPFAGTVTQVENI 233

Query: 241 L 241
            
Sbjct: 234 Q 234


>gi|159903754|ref|YP_001551098.1| membrane fusion protein [Prochlorococcus marinus str. MIT 9211]
 gi|159888930|gb|ABX09144.1| possible membrane fusion protein [Prochlorococcus marinus str. MIT
           9211]
          Length = 356

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 99/263 (37%), Gaps = 32/263 (12%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQ--ERIVY 224
           +   +    + +    +    + +  +  +   + +   E+   V++N L  +  +R   
Sbjct: 45  MNAEKGKLPSIISASGELQAEKTINVNPHRQGLIQEVYVEEGDPVARNQLIAKISDRDFP 104

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               ELR     +++  +   +L+DE  +    Y         + ++ F    ++L  ++
Sbjct: 105 FRLSELRAEFENKQSAFKRRKQLFDEGAISAEKY--------SEYKKDFLTSKARLEQIQ 156

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYIRAKVTP 336
              E+  I +P  G +   +     ++             P   +V  S+   + AKV  
Sbjct: 157 VEGEELLIRAPFKGMVTA-RYVEPGSFVSPNSRSSTNQGSPKTSVVEISQGLQVIAKVPE 215

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
            +I  ++K   A+VR   + D R   F++I+  I P   + +N       +EV L +   
Sbjct: 216 SEIGRIQKEQKASVRVEAFPDER---FESIVNNIAPRAVRSNNVTS----FEVKLSLISP 268

Query: 397 AFSDNNIELRNGFPAEVLFTAKN 419
                  +LR G  A+V F A  
Sbjct: 269 PP-----KLRIGMTADVEFQAGK 286



 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 37/115 (32%), Gaps = 19/115 (16%)

Query: 23  LSIIGIIGLITW------------------SILLPIEISVSSSGEILNEDNVVEIKSPFS 64
             ++ I G + W                  +    +   +S+SGE+  E  +        
Sbjct: 17  FLLVLIGGGVVWKIGPGKGNARDITSYTMNAEKGKLPSIISASGELQAEKTINVNPHRQ- 75

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           G+I++  VE G  + +   +    D +    +   +   +N +      K   D 
Sbjct: 76  GLIQEVYVEEGDPVARNQLIAKISDRDFPFRLSELRAEFENKQSAFKRRKQLFDE 130


>gi|328955677|ref|YP_004373010.1| efflux transporter, RND family, MFP subunit [Coriobacterium
           glomerans PW2]
 gi|328456001|gb|AEB07195.1| efflux transporter, RND family, MFP subunit [Coriobacterium
           glomerans PW2]
          Length = 447

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 65/209 (31%), Gaps = 20/209 (9%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +  +  +    +   +  L   N++        A      +  L   QR      +   
Sbjct: 150 QIDTALKDAERELKGAEADLVSANKIAGRPRGADAADSGGTADALAVAQRAVETARAARD 209

Query: 282 ILEKTREQKTILSPIAGTIVYNQS---------FSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                  +KT+ +P AG+I+              S+      S PLM+I        +R 
Sbjct: 210 AARAKVCEKTVRAPAAGSIISMNVQVGARLSELSSTGG---SSDPLMQIA-DLSQMKLRL 265

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           ++  + I  V     A + FP +  ++    +  +  I    S       +  Y      
Sbjct: 266 QIDEEDIASVVVDQIADITFPAFEGLK---LQGKVANIASCASTDSAASTSMSYNGSAAN 322

Query: 393 IT----DLAFSDNNIELRNGFPAEVLFTA 417
            +    DL  ++ +  L+ G  AE     
Sbjct: 323 TSTFAVDLLIAEPDPRLKPGMSAEATLVT 351


>gi|226228497|ref|YP_002762603.1| secretion protein HlyD family protein [Gemmatimonas aurantiaca
           T-27]
 gi|226091688|dbj|BAH40133.1| secretion protein HlyD family protein [Gemmatimonas aurantiaca
           T-27]
          Length = 368

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 82/251 (32%), Gaps = 11/251 (4%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           ++ E    D +G   +  ++          RS       + +    R+  E   ++L+ L
Sbjct: 6   KAPEAAPADAVGAPQAIGAENVAVARQDTLRSGPSISGTLIADREARIRAEVSGAVLQTL 65

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           + + Q+       L     + +  +            +      +    L+    L    
Sbjct: 66  VDAGQRVSEGT-VLAR---IDEGTVRDLAISARSGVAQANIAAEQAARELQRSKTLVAAG 121

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +   +       +L   Q   AD  ++L+  EK     TI +P AG +V  +S S  + 
Sbjct: 122 AIAERDVESAERANLG-AQAQLADAKARLSSAEKNLANATIRAPFAG-VVAEKSVSPGDI 179

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 L  ++   +   + A V    +  V+ G     +         +  +  + ++ 
Sbjct: 180 VSPGSALFTVI-DPRSLRVEASVPASALSEVRVGAPVMFKVNGAD----RMLEGRVTRVS 234

Query: 372 PIISQQDNNLQ 382
           P+++ Q   + 
Sbjct: 235 PMVNPQTKQVS 245



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 3/124 (2%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG ++ +     I++  SG + +  V+ G ++ +GT L   ++    DL    +  +   
Sbjct: 42  SGTLIADREAR-IRAEVSGAVLQTLVDAGQRVSEGTVLARIDEGTVRDLAISARSGVAQ- 99

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +I  E++A +   +K  V   A   R+ +  +                +SS  ++L  
Sbjct: 100 -ANIAAEQAARELQRSKTLVAAGAIAERDVESAERANLGAQAQLADAKARLSSAEKNLAN 158

Query: 167 KLTR 170
              R
Sbjct: 159 ATIR 162


>gi|87308816|ref|ZP_01090955.1| efflux transporter, RND family, MFP subunit [Blastopirellula marina
           DSM 3645]
 gi|87288527|gb|EAQ80422.1| efflux transporter, RND family, MFP subunit [Blastopirellula marina
           DSM 3645]
          Length = 463

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/380 (12%), Positives = 120/380 (31%), Gaps = 60/380 (15%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILL---------------PIEISVSSSGEILN 52
           N  R+  + + + T+ +++ +  L  W  L                PI   V   G+   
Sbjct: 2   NKNRSGNSWINKWTISAVVILAILGGWLALGQSSGVPVETTRPRRGPIAQYVDEQGKTRL 61

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
                EI  P  G I+   +E G  + +G  +      +  + +D  K +++ L   I  
Sbjct: 62  P-RTYEITMPLGGRIEAIALEPGDPVKKGETVARLVPSDLQNELDQAKAAVERLTASIA- 119

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                                                    N   +    S       + 
Sbjct: 120 ----------------------------------------ENADTTVEDTSKTQASHFVE 139

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           S+       + +    ++ +      L  ++ L    A ++++L++ +    ++  + ++
Sbjct: 140 SMKSTVEAAKARMVAGKSRVDYAITFLGRVQTLIPSGAKTEDELDRAQLRKVEADTDYQQ 199

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           ++      ++ I+            Y+      +   ++   +  ++L   +   E+ T+
Sbjct: 200 DVL-IFQAMKSIDAATLLLPTLVQQYIDRKDLTIAVLKQEKLEAEARLRQAKTNVERGTM 258

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SPI G ++     +    A     L+ I        + A +  +   ++  G  A +  
Sbjct: 259 ISPIDGVVLERSIVNEQQLA-AGAQLLTIG-DLHELEVEADLLSQDAVNLHHGSRALIYG 316

Query: 353 PHYADIREKKFKAIIEKIDP 372
                  E   + ++ +I P
Sbjct: 317 AAVGRAAENGLEGVVARIRP 336


>gi|254701807|ref|ZP_05163635.1| HlyD family protein secretion protein [Brucella suis bv. 5 str.
           513]
 gi|260566403|ref|ZP_05836873.1| HlyD family secretion protein [Brucella suis bv. 4 str. 40]
 gi|261758247|ref|ZP_06001956.1| HlyD family secretion protein [Brucella sp. F5/99]
 gi|260155921|gb|EEW91001.1| HlyD family secretion protein [Brucella suis bv. 4 str. 40]
 gi|261738231|gb|EEY26227.1| HlyD family secretion protein [Brucella sp. F5/99]
          Length = 319

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 40  LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFNRVSA 99

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 100 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 155

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 156 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFLAVGDPAFTLI-- 202

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 203 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITP 247


>gi|78046252|ref|YP_362427.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325928764|ref|ZP_08189933.1| multidrug resistance efflux pump [Xanthomonas perforans 91-118]
 gi|78034682|emb|CAJ22327.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325540845|gb|EGD12418.1| multidrug resistance efflux pump [Xanthomonas perforans 91-118]
          Length = 362

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 29/305 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V + A   R + L     + ++   +     + +   +L     +  S      +  
Sbjct: 76  QVPVQDFAHVKRGQLLARIDDRIYAQQLEQAKAQVQTAQANLANWDQQRHSAEATIAEQR 135

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  +A            + L  +  VS+ D               R+     +    
Sbjct: 136 AALSSNQAQRERTHSAYARTQQLASQQLVSEQD---------------RDTAFAARAQAD 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                   A        + ++ +    +   A+  + + + +   +   IL+P  G +  
Sbjct: 181 AGVAQARAAVQAAEENARSVTVNRAALEAALANAQATVQLAQINLDNTRILAPRDGQLGQ 240

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP     +I A     Q+  ++ G  A+       + R   
Sbjct: 241 LGVR-QGAYVTNGTQLMSLVP--DTLWIVANFKETQMARIRIGQRASFTVDALDNAR--- 294

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVL 414
               ++ I P    +      +  T  + ++  +I      D +      LR G    V 
Sbjct: 295 LHGRVQDISPAAGSEFSVLPADNATGNFVKIAQRIPLRISVDPDQPLAPRLRPGMSVVVA 354

Query: 415 FTAKN 419
               +
Sbjct: 355 VDTDS 359



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 56/174 (32%), Gaps = 18/174 (10%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSI-----------LLPIEISVSSSGEILNE 53
           M      + PA  +R     + G+IG    ++           L P   ++  +   +  
Sbjct: 1   MKTPADSSPPADRQRRRRRRLAGVIGFGGLALIGVALVLYAWRLPPFVSAIERTENAMVH 60

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             +  I    SG + +  V++ + + +G  L   +D        +    ++  +  + T 
Sbjct: 61  GQITVIAPQVSGYVTQVPVQDFAHVKRGQLLARIDD-------RIYAQQLEQAKAQVQTA 113

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           ++ L   + +    E     +   L     +   T S        +  + +  +
Sbjct: 114 QANLANWDQQRHSAEATIAEQRAALSSNQAQRERTHSAYARTQQLASQQLVSEQ 167


>gi|294792387|ref|ZP_06757534.1| secretion protein HlyD [Veillonella sp. 6_1_27]
 gi|294456286|gb|EFG24649.1| secretion protein HlyD [Veillonella sp. 6_1_27]
          Length = 354

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/215 (9%), Positives = 65/215 (30%), Gaps = 18/215 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--EISRDL 266
             ++Q + +     +  +   ++      +    +     +    +  + L+  +    L
Sbjct: 86  QVIAQINGSDTSAQLQNAEGAVKAAQSAYELAETNAKRYRELYAQQAISKLQLDQAENQL 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                      + L +         + +P  G I       +       Q +  +     
Sbjct: 146 NATSAQLQQAQASLNLSSNQNSYTNLTAPDTGIITALNI-EAGQVVAAGQSVGTLAAGHD 204

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A +  +++  +  G  AT+ F    ++     + +I +I P+             
Sbjct: 205 PEAVIA-LPEQELSKIHVGSPATITFWALPNVT---VQGVIREISPVPDPVART------ 254

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           Y V + + +   +   ++L  G       +  ++T
Sbjct: 255 YTVKITLQN---APKEVQL--GMTVNANLSTTDST 284



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 3/106 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFL 120
            G +    V  G  +  G  +      +T+  +   + ++K  +      +T       L
Sbjct: 68  GGRVINKFVNVGDVVQAGQVIAQINGSDTSAQLQNAEGAVKAAQSAYELAETNAKRYREL 127

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +  + +   +  E QL     +     + +      + Y +L  
Sbjct: 128 YAQQAISKLQLDQAENQLNATSAQLQQAQASLNLSSNQNSYTNLTA 173


>gi|224418747|ref|ZP_03656753.1| hypothetical protein HcanM9_05663 [Helicobacter canadensis MIT
           98-5491]
 gi|253826726|ref|ZP_04869611.1| AcrA membrane fusion protein [Helicobacter canadensis MIT 98-5491]
 gi|313142263|ref|ZP_07804456.1| macrolide-specific efflux protein macA [Helicobacter canadensis MIT
           98-5491]
 gi|253510132|gb|EES88791.1| AcrA membrane fusion protein [Helicobacter canadensis MIT 98-5491]
 gi|313131294|gb|EFR48911.1| macrolide-specific efflux protein macA [Helicobacter canadensis MIT
           98-5491]
          Length = 431

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 76/242 (31%), Gaps = 41/242 (16%)

Query: 206 FEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK---- 260
            +K  + ++ D    E+ +Y+   +L     + K+    + E   +       Y K    
Sbjct: 97  VKKGQILAKIDSESIEQDLYRYQAQLESAKAQLKSAEVTLQEKQWQYKQYQNLYQKTKGK 156

Query: 261 ---------------EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                          E   ++E  + +  +  + +   +       I SPI G ++  +S
Sbjct: 157 TPSILELETARTAYNEALSNVEIRKASIKEIETSIRSTQVDLRNSQITSPIDGVVLQ-RS 215

Query: 306 FSSSNYAQQ---SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                       +     I    +   + A ++   I  VK+G +       Y     K 
Sbjct: 216 IEVGQSVAASFQAPEFFIIAESLEEMELNASISEADIGKVKEGQSVEFSVDSYP---TKT 272

Query: 363 FKAIIEKIDP---------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           FKA +++++            S           YE  + +     ++ ++ LR G  A  
Sbjct: 273 FKAEVDRVNYGSSNTSSSTSSSSTTTTSSGIVSYEARIYV-----NNKDLLLRPGMSATA 327

Query: 414 LF 415
             
Sbjct: 328 DI 329



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 82/233 (35%), Gaps = 22/233 (9%)

Query: 17  LKRMTLLSIIGIIGLITW--------------SILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  +  + +  +I LI W              + +  I  ++S++G +    N V I S 
Sbjct: 23  VWGIIGVVVAILIALIYWWNTREPSISYQTQKAFVGDISSTISANGTLSP-TNEVSIGSV 81

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SGI+ +  V+   ++ +G  L   +       +   +  +++ +  + + +  L     
Sbjct: 82  ISGIVLEVLVDVNDKVKKGQILAKIDSESIEQDLYRYQAQLESAKAQLKSAEVTLQEKQW 141

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +Y   +  ++  + +    L     T    +N  +S+V            SI   ++DL 
Sbjct: 142 QYKQYQNLYQKTKGKTPSILE--LETARTAYNEALSNVEIRKASIKEIETSIRSTQVDLR 199

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-----NDLNQQERIVYKSTLEL 230
           N            Q+ + + +++       +       L + E     S  ++
Sbjct: 200 NSQITSPIDGVVLQRSIEVGQSVAASFQAPEFFIIAESLEEMELNASISEADI 252


>gi|56415486|ref|YP_152561.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197364414|ref|YP_002144051.1| HlyD-family secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56129743|gb|AAV79249.1| putative HlyD-family secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197095891|emb|CAR61466.1| putative HlyD-family secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 352

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 19/300 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F  + E L     +            I     ++      +          ++  
Sbjct: 60  VSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSEMRAAQSVV 119

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L S  K     ++L ++ AVS   L+        +   L     +       I 
Sbjct: 120 KQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESARAALETAKAQVSAAKAAIE 179

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                 Q +   A    +  + +   +   + +P  G + Y + 
Sbjct: 180 AARTSIIQ-------------AQTRVEAAQATERRIVAD--IDDSELKAPRDGRVQY-RV 223

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +Q   +K G  A +      D+R     +
Sbjct: 224 AEPGEVLSAGGRVLNMVDLSD-VYMTFFLPTEQAGLLKIGGEARLVLDAAPDLRIPATIS 282

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            +  +     +  + ++ + +  + V  +I       +   ++ G P             
Sbjct: 283 FVASVAQFTPKTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLDERVPW 342


>gi|23501938|ref|NP_698065.1| HlyD family secretion protein [Brucella suis 1330]
 gi|163843327|ref|YP_001627731.1| HlyD family protein secretion protein [Brucella suis ATCC 23445]
 gi|23347883|gb|AAN29980.1| HlyD family secretion protein [Brucella suis 1330]
 gi|163674050|gb|ABY38161.1| probable protein secretion protein, HlyD family [Brucella suis ATCC
           23445]
          Length = 366

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 87  LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFNRVSA 146

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 147 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 202

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 203 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQLGSFLAVGDPAFTLI-- 249

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 250 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITP 294



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 25/241 (10%), Positives = 70/241 (29%), Gaps = 24/241 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIK 60
           ++    HP   + + ++  +  I +  W             G+ ++ED+       V I 
Sbjct: 12  QDQSPKHPMLRRILLIVGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAIT 63

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG + +  V     + +G  L   +       +D  K ++      +    + L   
Sbjct: 64  PQVSGQVIRVAVGPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKL----AGLVLT 119

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +        +       +   +  +     F            +++ +          
Sbjct: 120 YKQQLASVAQAKDDVTFAQEQFNRVSALVHDKFEARAQFDQAERALQVAKQEQNAAASAA 179

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
               + L   L    Q+  +    L  K   ++ +L ++   + +        + + +N+
Sbjct: 180 AATLAQLGGTLDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPFAGTVTQVENI 233

Query: 241 L 241
            
Sbjct: 234 Q 234


>gi|330830468|ref|YP_004393420.1| Macrolide-specific efflux protein MacA [Aeromonas veronii B565]
 gi|328805604|gb|AEB50803.1| Macrolide-specific efflux protein MacA [Aeromonas veronii B565]
          Length = 387

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 92/270 (34%), Gaps = 35/270 (12%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN--AVSQNDLNQQERIVYKSTLELR 231
             + ++D+  + S     L+    D     +L  +    ++QN+L   E  +  +  +L+
Sbjct: 55  QAVEQVDVGAQVSGQVTKLAVEAGDQVKQGDLLAEVDPLIAQNNLKTAEAELASNRAQLK 114

Query: 232 ENIHE--------QKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFADEMSKLTI 282
               +        ++       E    A+LE A  L  +   +L+ +Q    + + K+  
Sbjct: 115 IKQAQLKQNELAWRRQQQMFKQEASSRADLESAEALLAVTRAELQNSQANIDNALIKVDR 174

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM--KIVPHS------KLTYIRAKV 334
            +       IL+P+ GT++           +Q Q L   + VP        +   ++A++
Sbjct: 175 AKTELGYTKILAPMDGTVISI-------VTRQGQTLAASQTVPTVLKLANLETMTVKAQI 227

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE----YYEVI 390
           +   +  VK G           D R +     +E     I+ Q     T      YY  +
Sbjct: 228 SEADVTKVKAGMPVYFTLIGDPDTRYQGTLRAVELAPTNINDQATTGTTTSNAAVYYYAL 287

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +      + +  LR     +V       
Sbjct: 288 FDVP-----NPDHTLRVAMTTQVTIVLGER 312



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 64/174 (36%), Gaps = 18/174 (10%)

Query: 20  MTLLSIIGIIGLITWSILLP------------IEISVSSSGEILNEDNVVEIKSPFSGII 67
           +T+L  + ++G + W    P            I  +V +SG +   + V ++ +  SG +
Sbjct: 12  ITMLIAVVLLGWLLWPSQPPKAMLTAQVTREDIAQTVLASGVLQAVEQV-DVGAQVSGQV 70

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            K  VE G Q+ QG  L   + +   + +   +  + + R  +  +++ L      +   
Sbjct: 71  TKLAVEAGDQVKQGDLLAEVDPLIAQNNLKTAEAELASNRAQLKIKQAQLKQNELAWRRQ 130

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++ F+       D       +   +     + +  S       +  +   + +L
Sbjct: 131 QQMFKQEASSRADL-----ESAEALLAVTRAELQNSQANIDNALIKVDRAKTEL 179


>gi|262164895|ref|ZP_06032633.1| hypothetical protein VMA_001340 [Vibrio mimicus VM223]
 gi|262027275|gb|EEY45942.1| hypothetical protein VMA_001340 [Vibrio mimicus VM223]
          Length = 355

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 101/299 (33%), Gaps = 27/299 (9%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           + +K  V++   E     L   +G+  +    +F     ++   L      +  + +N+ 
Sbjct: 77  VTSKPVVIKATQEGNVGPLNLVIGQSVTEQQALFEIDNDALSGELDFIRQEIAQLNVNQE 136

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFE----KNAVSQNDLNQQERIVYKSTLELRENIH 235
           +  +  +L       +   +  ++  +E    K  VS  D      + Y +  EL     
Sbjct: 137 ESFDYHTLTIENAQKNADQIQQIRKRYEFYKAKGQVSDVDYAAIINLAYSAQNELNSRHI 196

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
              +   +  E             + ++  + Q +R+    M +L + +   +Q  + SP
Sbjct: 197 ALNDAQNNYQE-------------RRLAGPISQARRSL---MKELAVKQTQLDQLNVRSP 240

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G +V           ++  PL+ I  +     + A + PK +   + G  A V FP  
Sbjct: 241 YDGRVVDIPVL-EGQQVEKGDPLVMIAKNVTP-QVTAYLNPKYLNVAQFGTHAKVTFPD- 297

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYY-EVILKITDLAFSDNNIELRNGFPAEV 413
                      +E +  +  Q     + +  Y EV L   +       IE   G   EV
Sbjct: 298 GKSFSATVSEAVEIVSKLPVQLSKPFEGKPAYMEVTLTFDEELEKSRWIE---GMTVEV 353


>gi|190575812|ref|YP_001973657.1| putative type I HlyD transporter [Stenotrophomonas maltophilia
           K279a]
 gi|190013734|emb|CAQ47369.1| putative type I HlyD transporter [Stenotrophomonas maltophilia
           K279a]
          Length = 360

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 95/319 (29%), Gaps = 23/319 (7%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +    +  K      A E  + Q +           + +   + +    L     ++ + 
Sbjct: 42  ADYTLVAPKIPGFVSAVEVEDNQSVKAGDVLARIDDRDYQVALQAARADLANARAQLANA 101

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                  ++  +  RA +   + +LT+        +  Q    +  R    +    ++  
Sbjct: 102 QAALAQQDSLIAQARASVDVSRSELTLA-------SADQQRYRELARDGAGTVQNAQQAQ 154

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK-TREQKTIL 293
            +Q     H+ +   +A L  A    +I     Q  +             +       + 
Sbjct: 155 SKQAVASAHLQQ--GQAALSTARQRTDILSAGVQAAQAAVQRAEAAQARAELDLSHTVLR 212

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +PI G +   ++     Y     P+  +VP  +   + A     Q+  ++ G    ++  
Sbjct: 213 APIDGMV-GRRAVRVGAYLTPGTPVAAVVPLKRAFVV-ANFQETQMTRMQAGQQVELKVD 270

Query: 354 HYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIE----L 405
            +     K  +  I+ I P      +       T  + +V+ +I      +        L
Sbjct: 271 VFP---GKPLRGHIDSIAPATGVTFAAVAPENATGNFTKVVQRIPVKIVLEPGQPLLDQL 327

Query: 406 RNGFPAEVLFTAKNTTLAQ 424
           R G   E      +   AQ
Sbjct: 328 RAGMSVEASVDLGSRARAQ 346



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 38/125 (30%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +   +VE+   +  G  L   +D +    +   +  + N R  +   ++AL   ++  
Sbjct: 53  GFVSAVEVEDNQSVKAGDVLARIDDRDYQVALQAARADLANARAQLANAQAALAQQDSLI 112

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                + +    +L               +   +            + S +L +      
Sbjct: 113 AQARASVDVSRSELTLASADQQRYRELARDGAGTVQNAQQAQSKQAVASAHLQQGQAALS 172

Query: 185 SSLLR 189
           ++  R
Sbjct: 173 TARQR 177


>gi|150017556|ref|YP_001309810.1| RND family efflux transporter MFP subunit [Clostridium beijerinckii
           NCIMB 8052]
 gi|149904021|gb|ABR34854.1| efflux transporter, RND family, MFP subunit [Clostridium
           beijerinckii NCIMB 8052]
          Length = 418

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 52/364 (14%), Positives = 111/364 (30%), Gaps = 89/364 (24%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           V +     G +    V+ G ++  G  L T +  +    ++  +  +     +++     
Sbjct: 71  VVVLPKAGGRVATVDVKVGDKVSVGQTLFTLDTTDYAAQLEQAEAGVSVASSNLERT--- 127

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                                  D         ++     +   Y S+K    R +++Y 
Sbjct: 128 ----------------------SDSGFTQQLLQAEQLVGKLQIQYNSVKDSYDRTQTLYS 165

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            +   +      +A   +   DL        KNA    +L + +     +          
Sbjct: 166 AQAVAKKDLDDAKAQYDAIAIDL--------KNAQDSLELLKSKSGPQATKAA------- 210

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                        EA LE             Q Q   +   ++++         T+ +PI
Sbjct: 211 -------------EAQLE-------------QAQAGVSAVQNQISNA-------TVTAPI 237

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           AG +V  ++      A      + ++           V  K ++ +K G +  V      
Sbjct: 238 AG-VVSEKAVEVGQLASAQSGSVTLI-DYNSLSAEINVPDKMLEKIKVGLSVPVTINALP 295

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           D +      +I+ I P  S ++N      +Y V +KI      + N  ++ G  A++   
Sbjct: 296 DSK---IVGVIDNISPNTSSKNN------FYIVKVKID-----NTNNNIQAGMFAKISLP 341

Query: 417 AKNT 420
           A+  
Sbjct: 342 AEKK 345


>gi|284036124|ref|YP_003386054.1| efflux transporter RND family, MFP subunit [Spirosoma linguale DSM
           74]
 gi|283815417|gb|ADB37255.1| efflux transporter, RND family, MFP subunit [Spirosoma linguale DSM
           74]
          Length = 471

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 75/277 (27%), Gaps = 50/277 (18%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L      +          +   +   A L   + D    + LF    +S  DL   E   
Sbjct: 105 LARARAAVNQSRAQLEQSKASVAQSSARLIRAKSDYERNRKLFADKVISAADLETSEANY 164

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +  E+       +    +I                                 + L   
Sbjct: 165 NVAKQEVEAANANVRASQFNIQSA-----------------------------EASLRDA 195

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQI 339
            +   + +I  P+ GT+                     +M+I  + +   +R  V    I
Sbjct: 196 NENLRKTSIYCPVNGTVSKLNIELGERVVGTSQMAGTEIMRIA-NLQNMEVRVNVNENDI 254

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVIL 391
             V  G TA +    Y     +KFK ++ +I            +    +      +E+ +
Sbjct: 255 VRVNLGDTADIEVDSY-TTAGRKFKGVVYEIANTANGLTSASGAAASLSADAVTEFEIKV 313

Query: 392 KITDLAFSD-------NNIELRNGFPAEVLFTAKNTT 421
           KI + +++D            + G  A V       +
Sbjct: 314 KILNNSYADLLAEKDKKGYPFKPGMTASVEIITDRKS 350



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 76/215 (35%), Gaps = 13/215 (6%)

Query: 35  SILLPIEIS--VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           + +  ++I+  VS+SG +  +  V  I    SG I    V  G  +  G  L        
Sbjct: 43  ATVKQLDITERVSASGRVQPQVEVK-ISPDVSGEIIGLYVNEGDPVKAGQLLCRIRPDNY 101

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L+   + ++   R  ++  K+++   + +    +  +E   +   D +       +  
Sbjct: 102 ESLLARARAAVNQSRAQLEQSKASVAQSSARLIRAKSDYERNRKLFADKVISAADLETSE 161

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            NY ++   + ++     +R+   N    E         L        +         VS
Sbjct: 162 ANYNVAK--QEVEAANANVRASQFNIQSAEASLRDANENLRKTSIYCPV------NGTVS 213

Query: 213 QNDLNQQERIVYKSTLELRE--NIHEQKNMLRHIN 245
           + ++   ER+V  S +   E   I   +NM   +N
Sbjct: 214 KLNIELGERVVGTSQMAGTEIMRIANLQNMEVRVN 248


>gi|240126506|ref|ZP_04739392.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           SK-92-679]
 gi|254494556|ref|ZP_05107727.1| multidrug resistance translocase [Neisseria gonorrhoeae 1291]
 gi|268602204|ref|ZP_06136371.1| multidrug resistance translocase [Neisseria gonorrhoeae PID18]
 gi|268685089|ref|ZP_06151951.1| multidrug resistance translocase [Neisseria gonorrhoeae SK-92-679]
 gi|291042958|ref|ZP_06568696.1| efflux pump protein FarA [Neisseria gonorrhoeae DGI2]
 gi|226513596|gb|EEH62941.1| multidrug resistance translocase [Neisseria gonorrhoeae 1291]
 gi|268586335|gb|EEZ51011.1| multidrug resistance translocase [Neisseria gonorrhoeae PID18]
 gi|268625373|gb|EEZ57773.1| multidrug resistance translocase [Neisseria gonorrhoeae SK-92-679]
 gi|291013097|gb|EFE05066.1| efflux pump protein FarA [Neisseria gonorrhoeae DGI2]
          Length = 394

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 113 NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHART 172

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 173 AVSQAQAAVKAALAEESSARAALGGGVSLRE-----------------QPEVQTAIGRLK 215

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                  +  + +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 216 DAWLNLRRTQVRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 273

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 274 MKIGQPAEL 282



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 5/130 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 64  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 123

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R +  T ++       + D+     + R    L   G   +         +S    ++K 
Sbjct: 124 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARTAVSQAQAAVKA 183

Query: 167 KLTRMRSIYL 176
            L    S   
Sbjct: 184 ALAEESSARA 193


>gi|289667441|ref|ZP_06488516.1| multidrug resistance efflux pump [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 362

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 90/305 (29%), Gaps = 29/305 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V + A   R + L    G+ ++   +     + +   +L     +  S      +  
Sbjct: 76  EVPVQDFAHVKRGQLLAKIDGRIYAQQLEQAKAQVQTAQANLANWEQQRHSAEATIAEQR 135

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  +A     +      + L  +  VS+ D               R+     +    
Sbjct: 136 AALSSNQAQRDRTRSAYARTQQLASQQLVSEQD---------------RDTAFAARAQAD 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                   A        + ++ +    +   A+  + + + +   +   IL+P  G +  
Sbjct: 181 AGVAQARAAVQAAEENARSVTVNRAALEAAVANAQAAVQLAQINLDNTRILAPRDGQLGQ 240

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP     +I A     Q+  ++ G  A+       + R   
Sbjct: 241 LGVR-QGAYVTNGTQLMSLVP--GTLWIVANFKETQMAKIRTGQRASFTVDALDNAR--- 294

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVL 414
               +++I P    +      +  T  + ++  +I      D N      LR G    V 
Sbjct: 295 LHGRVQEISPAAGSEFSVLPADNATGNFVKIAQRIPLRISVDPNQPLAPRLRPGMSVVVA 354

Query: 415 FTAKN 419
               +
Sbjct: 355 VDTDS 359



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 53/169 (31%), Gaps = 11/169 (6%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSI-----------LLPIEISVSSSGEILNE 53
           M      + PAS +R     I G+IG    ++           L P   ++  +   L  
Sbjct: 1   MNTPADSSPPASQQRRRRRRIAGVIGFGGLALIGVALVLYAWRLPPFVSAIERTENALVH 60

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             +  I    SG + +  V++ + + +G  L   +       ++  K  ++  + ++   
Sbjct: 61  GQITVIAPQVSGYVTEVPVQDFAHVKRGQLLAKIDGRIYAQQLEQAKAQVQTAQANLANW 120

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +               A  S + Q       Y  T        +S   R
Sbjct: 121 EQQRHSAEATIAEQRAALSSNQAQRDRTRSAYARTQQLASQQLVSEQDR 169


>gi|307322228|ref|ZP_07601596.1| secretion protein HlyD family protein [Sinorhizobium meliloti AK83]
 gi|306892115|gb|EFN22933.1| secretion protein HlyD family protein [Sinorhizobium meliloti AK83]
          Length = 362

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/373 (13%), Positives = 109/373 (29%), Gaps = 85/373 (22%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               V  I    SG + +  V +  ++  G  L+  +D        +    +   +  + 
Sbjct: 52  VRGYVTTISPQLSGYVAEVPVRDYEEVRAGQLLVRIDD-------RIYVQKLAQAKATLA 104

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T++SAL                                        +S  + L  K    
Sbjct: 105 TQRSALA---------------------------------------NSFEQELSAK---- 121

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                     E +    +A L++ +     ++ L +K   +++D +Q      ++   ++
Sbjct: 122 ----AGIAASEAQLDGAKAALATARATWDRIRPLADKGVATRSDADQARAAFEQADAGVK 177

Query: 232 ENIHEQKNMLRHINELYD-EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           + I   +   + +       A LE +    E + +L +                   +  
Sbjct: 178 QAIANLEVSRQSLATTLGARAGLEGSVAGAEAAVELAEI----------------DLDNT 221

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I++P AG +    +     Y      L+ +VP     +I A     Q+  ++ G   T+
Sbjct: 222 RIVAPRAGRLGEIGAR-VGQYVTAGTQLLSVVP--HEVWIVANFKETQLDGMRVGQPVTI 278

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNN 402
                        +  IE+  P    +      +  T  + +V     ++I         
Sbjct: 279 SVDALNRQ---VLRGHIERFSPAAGSEFSIIRPDNATGNFTKVAQRLGVRIAVDPEQPMA 335

Query: 403 IELRNGFPAEVLF 415
             L  G    V  
Sbjct: 336 DRLAPGLSVVVRV 348


>gi|313682367|ref|YP_004060105.1| secretion protein hlyd family protein [Sulfuricurvum kujiense DSM
           16994]
 gi|313155227|gb|ADR33905.1| secretion protein HlyD family protein [Sulfuricurvum kujiense DSM
           16994]
          Length = 385

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/316 (12%), Positives = 101/316 (31%), Gaps = 42/316 (13%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  V  SG I  + +++ + + + G I   +V  G  I  G+ +   +  E         
Sbjct: 36  DNLVQGSGRI--DGDLINVNAKYPGRIASMEVSEGEAISIGSVIAVIDSAEQKAQKAQID 93

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             I+  +  +   K  L                                         S+
Sbjct: 94  AQIEAQKQQLAARKIELSI------------------------------------AQKSI 117

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            ++L               +L+   +  + L++  Q+D   + NLF    + ++ L    
Sbjct: 118 PQTLVKAKANSSIKKAQLDELDKMINTQKNLVTQDQRDNERLNNLFNNRLIEKHQLEMSV 177

Query: 221 RIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRD-LEQNQRTFADEMS 278
             +     +L   + +++ + + I+    D+     A    +  R+ +   +      ++
Sbjct: 178 LKLRSDQDQLSSLMDKREQLKKAIDITQSDQIEASAAQQKTDALREGINATESGIKALIA 237

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
             T       +  + SP+ G ++  +  ++         +  ++   K  Y++  V   +
Sbjct: 238 SQTQANAVLSEMVLRSPVEGFVME-KIANNGEVVGAGMAVATLI-DPKSLYLKIFVDTLK 295

Query: 339 IQHVKKGYTATVRFPH 354
              +K G +A +    
Sbjct: 296 NGKIKIGDSAVIFLDA 311


>gi|306840542|ref|ZP_07473301.1| HlyD family protein secretion protein [Brucella sp. BO2]
 gi|306289557|gb|EFM60775.1| HlyD family protein secretion protein [Brucella sp. BO2]
          Length = 347

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 68  LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFDRVLA 127

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 128 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 183

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 184 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFLAVGDPAFTLI-- 230

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 231 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDH---PLQGEVQSITP 275



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 64/208 (30%), Gaps = 26/208 (12%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIKSPFSGIIKKF 70
            + + +   +  I +  W             G+ ++ED+       V I    SG + + 
Sbjct: 3   RRILFIAGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAITPQVSGQVIRV 54

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID----TEKSALDFLNNKYDV 126
            V     + +G  L   +       +D  K ++      +     T K  L  +    D 
Sbjct: 55  AVGPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDD 114

Query: 127 LEKAFESREEQLLDFLGKYHSTCS--------KVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           +  A E  +  L     K+ +           +V     ++   +    L ++       
Sbjct: 115 VTFAQEQFDRVLALVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKP 174

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLF 206
           L         +A +   ++++ + + L 
Sbjct: 175 LQQHASYLAAKAEVELAERNVRLTRVLA 202


>gi|289670193|ref|ZP_06491268.1| multidrug resistance efflux pump [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 397

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 82/268 (30%), Gaps = 28/268 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y +    + + S     L S + D    KNL    A+S 
Sbjct: 97  EVAVQQAEANLAKTVRQVRGLYRSVESAQAELSAREVTLRSARSDFARRKNLAATGAISN 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L                     ++ L         +   F      +      NQ   
Sbjct: 157 EEL------------------AHARDELAAAEAAVSGSRESFERNRALVDDSAVANQPDV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L        +  +++P++G +   +S       Q    LM +VP  +  ++ A 
Sbjct: 199 QTAAAQLRQAYLNHARTGVVAPVSGYVAR-RSAQVGQRVQPGSVLMAVVPL-EQVWVEAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----E 385
               Q++H++ G    +    Y        + +++ +            N         +
Sbjct: 257 FKETQLKHMRLGQEVELHSDLYGGGVNYTGRIESLGLGTGSAFSLLPAQNASGNWIKIVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
              V + +     + N + +      EV
Sbjct: 317 RVPVRIAVDSKQLASNPLRIGLSMKVEV 344



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 74/215 (34%), Gaps = 21/215 (9%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSP 62
                  A+L+ +  + I+ IIGL+ W  L+       + +         + N V+I   
Sbjct: 14  AAPSKRRAALRIVAFVVILAIIGLVVWYFLVGRWHEDTDDA-------YVQGNQVQITPM 66

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +     E+G ++ +G  L+  +  +T       +V+++    ++      +  L  
Sbjct: 67  VGGTVVSIGAEDGMRVERGQLLVQLDPADT-------EVAVQQAEANLAKTVRQVRGLYR 119

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLD 180
             +  +    +RE  L      +    +      IS   +  +         ++  +R  
Sbjct: 120 SVESAQAELSAREVTLRSARSDFARRKNLAATGAISNEELAHARDELAAAEAAVSGSRES 179

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            E   +L+     ++Q D+        +  ++   
Sbjct: 180 FERNRALVDDSAVANQPDVQTAAAQLRQAYLNHAR 214


>gi|170025555|ref|YP_001722060.1| efflux pump membrane protein [Yersinia pseudotuberculosis YPIII]
 gi|169752089|gb|ACA69607.1| efflux pump membrane protein [Yersinia pseudotuberculosis YPIII]
          Length = 390

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 86/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +   +L +  LS  Q DL     L     + +
Sbjct: 98  EQAFEQAKTALANSVRQTHQLIINSKQYQANIALKKTELSQAQNDLKRRVVLGAAAVIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +   L                  D A  ++      +     + Q   
Sbjct: 158 EELQHARDAVEAAQASL------------------DMAVQQYNANQALVLNTPLEKQPAI 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +K+     T ++  ++SPI+G +   +S           PLM +VP     +I A 
Sbjct: 200 EQAAAKMRDAWLTLQRTKVVSPISGYVSR-RSVQVGAEISSGTPLMAVVPAD-QLWIDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G  AT+    Y D     ++  +  +D          P  +   N ++ 
Sbjct: 258 FKETQLVNMRIGQPATIVTDFYGDDV--VYQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V + + +    ++ + +
Sbjct: 316 VQRLPVRIALDEKQLKEHPLRI 337



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 59/174 (33%), Gaps = 10/174 (5%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH--- 109
             N V+I S   G +     EN   +  G  L+T +  +     +  K ++ N       
Sbjct: 58  SGNQVQIMSQVPGSVVSVHFENTDFVKSGDVLVTLDPTDAEQAFEQAKTALANSVRQTHQ 117

Query: 110 --IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             I++++   +    K ++ +   + +   +L           +     + +   SL M 
Sbjct: 118 LIINSKQYQANIALKKTELSQAQNDLKRRVVLGAAAVIGREELQHARDAVEAAQASLDMA 177

Query: 168 LTR--MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF---EKNAVSQNDL 216
           + +       +    LE + ++ +A        LT+ +          VS+  +
Sbjct: 178 VQQYNANQALVLNTPLEKQPAIEQAAAKMRDAWLTLQRTKVVSPISGYVSRRSV 231


>gi|222056599|ref|YP_002538961.1| efflux transporter, RND family, MFP subunit [Geobacter sp. FRC-32]
 gi|221565888|gb|ACM21860.1| efflux transporter, RND family, MFP subunit [Geobacter sp. FRC-32]
          Length = 430

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 70/222 (31%), Gaps = 21/222 (9%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L +  A S+  L   E  V ++     E         +       +   +      E +
Sbjct: 120 KLQDAVAKSRASLAAAEAQVLQAQATTAEARAALARFRQVAQLSGGKVPSKAEMDSAEAN 179

Query: 264 RDLEQN-----QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--Q 316
               +      + +     + L   E    + +I SPI G ++  +          S   
Sbjct: 180 LKRAEANEASARASVTQTRANLQSDETNLSKASIRSPINGVVLARKV-EPGQTVAASFQA 238

Query: 317 PLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           P++  +        ++  V    +  VK G  AT     +   +     A+I ++     
Sbjct: 239 PVLFTLAEDLSKMELQVDVDEADVGQVKVGQKATFSVDAWPGRKY---DAVITRVGYGSQ 295

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +++          V+  +T L  +++++ LR G       T 
Sbjct: 296 KKEG---------VVSYLTVLQVANDDLSLRPGMTGIAEITT 328



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 62/145 (42%), Gaps = 10/145 (6%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS++G +   + V ++ S  SGII +  V++  Q+ +G  L   +  +  D +   + S+
Sbjct: 74  VSATGNLQPTNQV-DVGSELSGIIDRVFVDDNGQVKRGQVLARLDPAKLQDAVAKSRASL 132

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                 +   ++             +A  +R  Q+    G    + +++ +   +++ R+
Sbjct: 133 AAAEAQVLQAQATTAE--------ARAALARFRQVAQLSGGKVPSKAEM-DSAEANLKRA 183

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLL 188
              + +   S+   R +L++  + L
Sbjct: 184 EANEASARASVTQTRANLQSDETNL 208


>gi|115525949|ref|YP_782860.1| RND family efflux transporter MFP subunit [Rhodopseudomonas
           palustris BisA53]
 gi|115519896|gb|ABJ07880.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
           palustris BisA53]
          Length = 425

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 88/282 (31%), Gaps = 28/282 (9%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S++       + +  +        I +   +L+         ++  +  +  ++ L +  
Sbjct: 88  SQITGTVKDVLVKEGQQVRQGQELIAIEASELQAAVVQNEGAVAQAEARVRQLRELTKPA 147

Query: 210 AV-----SQNDLNQQERIVYKSTL------ELRENIHEQKNMLRHINELYDEANLEFANY 258
           A      +Q +L   E    +++         R  + E    L     L   A L+    
Sbjct: 148 ADQSLNQAQANLLNAEAAYERASKLAAGGFGTRATLDEATKNLNVARTLVRTAELQVYTS 207

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
              +  D    Q   A   + LT         TI +P  G ++  ++    +  Q  + L
Sbjct: 208 -SPVGSDFVMAQTQLAQAQANLTTARARLGYATITAPRDG-VLITRNVERGSVVQPGKAL 265

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + + P      +  ++  K +  +  G  A      Y D R   F A +  I+P +    
Sbjct: 266 LVLAPAGDSQIV-VQIDEKNLGQLALGQPALASADAYPDRR---FNATLSYINPSVDINR 321

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            ++      EV L +T+         LR      V       
Sbjct: 322 ASV------EVKLAVTEPPDY-----LRQDMTVSVDIATARR 352



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 1/110 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  SV +SG I      VEI S  +G +K   V+ G Q+ QG  L+  E  E    + 
Sbjct: 66  GNLVQSVVASGHIETP-FRVEIGSQITGTVKDVLVKEGQQVRQGQELIAIEASELQAAVV 124

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             + ++      +   +       ++     +A     E   +   K  +
Sbjct: 125 QNEGAVAQAEARVRQLRELTKPAADQSLNQAQANLLNAEAAYERASKLAA 174


>gi|148361255|ref|YP_001252462.1| membrane-fusion protein AcrA [Legionella pneumophila str. Corby]
 gi|296108594|ref|YP_003620295.1| Membrane-fusion protein [Legionella pneumophila 2300/99 Alcoy]
 gi|148283028|gb|ABQ57116.1| AcrA, Membrane-fusion protein [Legionella pneumophila str. Corby]
 gi|295650496|gb|ADG26343.1| Membrane-fusion protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 381

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/239 (11%), Positives = 77/239 (32%), Gaps = 31/239 (12%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +   S  +      + L+    +S+N+   ++  +  + + L +   +   ML  +++  
Sbjct: 107 KDSYSIAKAKFVGTEELWNAGLISKNNYLSEKSGLDTARVTLMQATRKLSEMLEKMDDKN 166

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY------ 302
            +     +                 AD      IL        + +P  G ++Y      
Sbjct: 167 TQNISNLS----------------LADFDKVRKILTSNHNLIHLKAPSDGIMLYPPKSGE 210

Query: 303 --NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
             N   +  +  +  Q +  I   +    +   V    I  ++ G  AT+    +   + 
Sbjct: 211 DKNNRVTVGSTIKSGQVIALIGDLNG-ISVEIDVPEIDIDKIRPGMEATISGVAFGRHQ- 268

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              K  +  ++   S  + +      +  ++++  L     +  ++ G  A +    ++
Sbjct: 269 --LKGKLVAVNAQAS--NTSTGGLPSFTAVVEVNSLTPEQQSW-IKVGMSASIELNVES 322


>gi|328543120|ref|YP_004303229.1| Efflux transporter RND family, MFP subunit [polymorphum gilvum
           SL003B-26A1]
 gi|326412866|gb|ADZ69929.1| Efflux transporter, RND family, MFP subunit [Polymorphum gilvum
           SL003B-26A1]
          Length = 426

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 76/220 (34%), Gaps = 16/220 (7%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFANYLKE- 261
            L  + A ++  L  ++  + ++T  + E       M R +   +  ++NLE A    + 
Sbjct: 121 KLNAEVAHARASLRAKQAALLEATATVEEKRSALDRMRRLMDRSVVAQSNLEEAQAAYDR 180

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMK 320
               +E  +       + L I E   ++  I SPI G ++  Q       A   Q P++ 
Sbjct: 181 ALAGVESAEAAIEVAKADLQIAETNLQKACICSPIDGIVLDRQVDPGQYVASSLQAPVLF 240

Query: 321 IVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            V        +R  +    +  V++G TA+     Y D         +            
Sbjct: 241 TVAEDLSEMDLRVDIDEADVGLVREGQTASFTVDAYPDRVFPATIHKVRY-------APE 293

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + +    Y+  LK+      +  + LR G  A      + 
Sbjct: 294 SAEGVVTYKAELKVD-----NGELLLRPGMTATAEIVIEE 328



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 52/132 (39%), Gaps = 4/132 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           ISV+++G +   + V +I S  SG+I+K   +   ++  G  L   +  +    +   + 
Sbjct: 73  ISVTATGTVEPTNQV-DISSELSGMIRKVGADYNDRVAAGQVLAELDTDKLNAEVAHARA 131

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFES---REEQLLDFLGKYHSTCSKVFNYGIS 158
           S++  +  +    + ++   +  D + +  +     +  L +    Y    + V +   +
Sbjct: 132 SLRAKQAALLEATATVEEKRSALDRMRRLMDRSVVAQSNLEEAQAAYDRALAGVESAEAA 191

Query: 159 SVYRSLKMKLTR 170
                  +++  
Sbjct: 192 IEVAKADLQIAE 203


>gi|254230585|ref|ZP_04923948.1| efflux transporter, RND family, MFP subunit [Vibrio sp. Ex25]
 gi|151936886|gb|EDN55781.1| efflux transporter, RND family, MFP subunit [Vibrio sp. Ex25]
          Length = 362

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 60/183 (32%), Gaps = 18/183 (9%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +   +  + E    A     +   +        Q    D  + L+ ++       + +P 
Sbjct: 123 RAQAMLLVKEKEFNAAKSLKSRGLQGEVAFATAQAALVDARANLSNVQTALRNTEVKAPF 182

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G IV +      ++     P+  ++       I A V+ + IQ++K+G  A VR     
Sbjct: 183 DG-IVDHHFVELGDFVGIGDPIATVI-DLDTLVIEADVSERHIQYLKEGLEADVR----- 235

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            I ++  +  +  I  + S   N               ++   + +  +  G  AEV   
Sbjct: 236 TINQQHHQGHVRYIGRVSSASTNTF-----------PIEIEIDNQDARIPAGMSAEVQLP 284

Query: 417 AKN 419
              
Sbjct: 285 LSK 287


>gi|325291028|ref|YP_004267209.1| efflux transporter, RND family, MFP subunit [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324966429|gb|ADY57208.1| efflux transporter, RND family, MFP subunit [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 438

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 105/332 (31%), Gaps = 78/332 (23%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   N + I +   G IK   V+NG Q+ +G  LL  + ++ +         +  L   +
Sbjct: 79  VLPSNELLIYNQVDGKIKTISVQNGDQVKKGQVLLEIDTVDLS-------YQLSALTAQL 131

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            + +                                               R      + 
Sbjct: 132 GSIEG---------------------------------------------QRQQTGGASA 146

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             +I   RL LE       A     ++ L   K L+   A+S     ++ER+  K+    
Sbjct: 147 EANINQQRLLLEQAEKDALAQ----EQSLNRAKALYGTGAISLVQFEEEERLNEKA---- 198

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R N+ +QKN L  +N     + L F +    +S  + Q              L +  +  
Sbjct: 199 RNNLAQQKNALELLNHNKSGSELYFDSQKNALSAQISQ--------------LTEKIKNA 244

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +P  G I    +F   +     Q L+  V  ++   + + V    +  ++ G    +
Sbjct: 245 RISAPQDGYIKDL-TFKEGSMISLGQYLLS-VYQNQGYKLESYVLASDVLGIRSGDPVEL 302

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                   +     A IE ID    ++ + L 
Sbjct: 303 VQDTGDGKKT--LAAKIEHIDSSAVERISPLG 332


>gi|167764454|ref|ZP_02436575.1| hypothetical protein BACSTE_02838 [Bacteroides stercoris ATCC
           43183]
 gi|167697123|gb|EDS13702.1| hypothetical protein BACSTE_02838 [Bacteroides stercoris ATCC
           43183]
          Length = 303

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 84/247 (34%), Gaps = 33/247 (13%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         ++S+   R D+  + +  +  +   Q++   + NL    A +Q  L+ 
Sbjct: 76  QLYLKKLQLEAGVKSVEGQRPDILKQVAATKEQIVQAQRERDRVANLLRVGAANQKQLDD 135

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E ++     +L       +N  + +        ++ A                      
Sbjct: 136 AESLLKVLRKQLAAQNSTLQNSDQSLTWQSSSVGIQVAQ--------------------- 174

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E   ++  I++P+ GT++  +   +   A    PL K+    +  Y+RA +T +Q
Sbjct: 175 ----VEDQLKKCHIVAPLTGTVLA-KYAEAGELAAPGTPLFKMA-DMEQIYLRAYITSEQ 228

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  VK G   TV +  Y       +  ++  I              + +    Y V + +
Sbjct: 229 LSEVKLGQKVTV-YADYGKDVRTAYPGVVTWISDSSEFTPKTILTKDERANLVYAVKVAV 287

Query: 394 TDLAFSD 400
            +     
Sbjct: 288 KNDGMLK 294


>gi|241204617|ref|YP_002975713.1| efflux transporter, RND family, MFP subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240858507|gb|ACS56174.1| efflux transporter, RND family, MFP subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 430

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 82/225 (36%), Gaps = 18/225 (8%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD-EANLEFAN 257
           L     L      S+  LN  +  V K+  +++      + +   +      + +L+ A+
Sbjct: 122 LLDTNKLEADVKSSRAKLNSAKANVIKANADMQSAGTSLERLKSLVKSNVSTQQSLDDAS 181

Query: 258 YLKEISRDLEQ-NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS- 315
           Y  + +   +Q N+       + L + E    +  I+SPI G I+             S 
Sbjct: 182 YKYDSAVAAKQINEAEVLASEADLQLAEVNLAKAKIISPIDGVILTRSVN-PGATVAASL 240

Query: 316 -QPLM-KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             P++  I    K   ++  V    +  +  G  A      Y D       A IE+I   
Sbjct: 241 SAPILFTIAGDLKKMELQVDVDEADVGQIAVGQKAKFTVDAYPDRSFP---AEIEQI-RF 296

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            S+  NN+ T   Y+ +L +      + ++ LR G  A    T +
Sbjct: 297 ASEVVNNVVT---YKAVLSVD-----NADLLLRPGMTATADVTVE 333



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 81/234 (34%), Gaps = 11/234 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + V+++G +   + V +I S  SG ++   V+  S +  G  L   +  +   
Sbjct: 72  AKRGDLTVLVTATGSVQPTEQV-DISSELSGTVRDVNVDYNSTVKSGEVLALLDTNKLEA 130

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE---KAFESREEQLLDFLGKYHSTCSK 151
            +   +  + + + ++    + +       + L+   K+  S ++ L D   KY S  + 
Sbjct: 131 DVKSSRAKLNSAKANVIKANADMQSAGTSLERLKSLVKSNVSTQQSLDDASYKYDSAVAA 190

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                   +     ++L  +       +   +   L R++        ++   +      
Sbjct: 191 KQINEAEVLASEADLQLAEVNLAKAKIISPIDGVILTRSVNPGATVAASLSAPIL---FT 247

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLKEI 262
              DL + E  V     ++   I   +     ++   D    A +E   +  E+
Sbjct: 248 IAGDLKKMELQVDVDEADV-GQIAVGQKAKFTVDAYPDRSFPAEIEQIRFASEV 300


>gi|89893777|ref|YP_517264.1| hypothetical protein DSY1031 [Desulfitobacterium hafniense Y51]
 gi|89333225|dbj|BAE82820.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 334

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/361 (12%), Positives = 111/361 (30%), Gaps = 69/361 (19%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
              +G+IG I  +        +  +G  + E  +    S  SG I +  VE G  +  G 
Sbjct: 10  FLSLGLIGFILTASGCSSPSGLVLTG--IAETGIYAHYSEVSGKISQLNVELGQAVKAGD 67

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L   +D      +   + ++   +  +    +  D      +V ++       ++    
Sbjct: 68  ILAVLDDSNERYALKQLEQALARKQAVLAELTAGAD----PEEVKQRQNNVALAEIASAN 123

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            +     +K        +  +  +  + +  I       E   S +   L + ++ L   
Sbjct: 124 AQPTQERTKKDYEDAQVLQEAGALAQSGLDKIKYQADLAEAAVSTVAIQLDNARRQLA-- 181

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             L +K    Q  ++  +  +  + +++R+                              
Sbjct: 182 --LIQKG-TPQEKIDAAQADLALTEVQIRQT----------------------------- 209

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
                                +    + T+ +   GT++  +++   N       L+ I 
Sbjct: 210 ---------------------KDNLSKYTLHALQDGTVIS-RNYLPGNMISPGFNLVDIA 247

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
             ++   + A V  + +  +  G T  +R        EK+++  +  ID        ++Q
Sbjct: 248 SETEKHLV-AYVPKESLPKLSHGQTVVIR------WGEKEYEGTVSFIDVKAQYTPKDMQ 300

Query: 383 T 383
           T
Sbjct: 301 T 301


>gi|329954281|ref|ZP_08295375.1| efflux transporter, RND family, MFP subunit [Bacteroides clarus YIT
           12056]
 gi|328527987|gb|EGF54973.1| efflux transporter, RND family, MFP subunit [Bacteroides clarus YIT
           12056]
          Length = 409

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 68/222 (30%), Gaps = 19/222 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDL 266
             +++ D    +  V            E +   ++        E  L      ++   + 
Sbjct: 86  QLIAEMDRVTLQSEVASQRAAYNGAKAEYEYQRKNYERNRGLHEKQLISDTDYEQSVYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ +  +    + L   E+     TI SPI G +V N++               L  I  
Sbjct: 146 EKAKSNYESSQASLAKAERNLSYATITSPIDG-VVINRAVEEGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQD 378
                 + A V    I  V+ G   T     Y +     F+ ++ +I         S   
Sbjct: 205 DLTQMQVVADVDEADIGGVEDGQRVTFTVDAYPNDT---FEGVVTQIRLGEDSSSSSGSS 261

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               T   YEV++        + +++L+    A V     + 
Sbjct: 262 TTSSTVVTYEVVISAP-----NPDLKLKPRLTANVTIYTLDR 298



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 56/148 (37%), Gaps = 1/148 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  SV+++G I     V E+ +  SGII K   +  S + +G  +   + +     + 
Sbjct: 43  GEISESVTATGTIEPVTEV-EVGTQVSGIIDKIYADYNSVVTKGQLIAEMDRVTLQSEVA 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            ++ +    +   + ++   +     ++    +    E+ + ++     +  S   +   
Sbjct: 102 SQRAAYNGAKAEYEYQRKNYERNRGLHEKQLISDTDYEQSVYNYEKAKSNYESSQASLAK 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +    S     + +  + +NR   E ++
Sbjct: 162 AERNLSYATITSPIDGVVINRAVEEGQT 189


>gi|205372148|ref|ZP_03224963.1| HlyD family type I secretion membrane fusion protein [Bacillus
           coahuilensis m4-4]
          Length = 244

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 88/227 (38%), Gaps = 15/227 (6%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRD 265
           EK  ++++ + + +  +      + E   +    + +++  L  E     AN   +I   
Sbjct: 21  EKIEINKSAIKKYDVQINSLKNSIGEESADIGQKVENLDTSLTQEIKGIQANSKLQIQGK 80

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           +E   +   +   +  IL   +E   + SP++G I  ++ +   ++ Q++Q L KI+P  
Sbjct: 81  IEDITQNLKELKLQEAILLNKQENYILKSPVSGVIQTDKMWGKYHHVQENQELFKIIPED 140

Query: 326 KLTYIR--AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQDNNL 381
             T+      +    I+ ++      ++ P       +  K  +  I   PI+    N  
Sbjct: 141 TNTHQEILIFINNDDIRKIQYNQNVKIQLPSDKTNGHETLKGKVIFISKEPIVD---NER 197

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           +   YY    +I D      +I L NG   + +      +  Q ++ 
Sbjct: 198 KVFTYY-ARAEIED------SITLPNGIQGKAIIVTNKISSLQYVLS 237


>gi|167753927|ref|ZP_02426054.1| hypothetical protein ALIPUT_02212 [Alistipes putredinis DSM 17216]
 gi|167658552|gb|EDS02682.1| hypothetical protein ALIPUT_02212 [Alistipes putredinis DSM 17216]
          Length = 396

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 72/217 (33%), Gaps = 18/217 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-ANYLKEISRDLE 267
             +++ D    +  +  +  +L  +  E +   ++          +  ++   + +  L 
Sbjct: 84  QLIAEMDKVTLQAELESAQAQLASSKTEYEYQTKNYARTKTLHEKQLVSDAEYDQAFYLY 143

Query: 268 QNQRTFADE-MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           +  R   ++  + +  +++     TI SPI G ++  ++               L  I  
Sbjct: 144 ETARNAYEQSQAAMVKVKRNLGYATITSPIDGVVIS-RAVEEGQTVAAGFETPTLFTIAN 202

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 + A V    I  V  G         Y D     F+  + ++    + + N +  
Sbjct: 203 DLTQMQVVADVDEADIGQVADGQRVQFSVDAYPDDT---FEGTVLQVRLEATTESNVVT- 258

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              YEV++        + +++L+ G  A V       
Sbjct: 259 ---YEVVIDAP-----NPDLKLKPGLTANVTIFTLEK 287



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G +     V E+ +  SGII K   +   Q+  G  +   + +     ++  
Sbjct: 43  IRNSVTATGTVEPVTQV-EVGTQVSGIIDKLYADYNDQVKAGQLIAEMDKVTLQAELESA 101

Query: 100 KVSIKNLRCHID 111
           +  + + +   +
Sbjct: 102 QAQLASSKTEYE 113


>gi|93007224|ref|YP_581661.1| secretion protein HlyD [Psychrobacter cryohalolentis K5]
 gi|92394902|gb|ABE76177.1| secretion protein HlyD [Psychrobacter cryohalolentis K5]
          Length = 440

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 62/197 (31%), Gaps = 26/197 (13%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  + Q E  V ++   L     +   +L  I+      +               Q Q +
Sbjct: 157 EQQVLQAEADVAEAKATLANATADAARVLPLID-----IDAISKQEADRYRTAKLQAQAS 211

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                ++L+    +     +++P++G I      +         PL  I+    +   RA
Sbjct: 212 LQASKARLSTQRLSVNNANVVAPVSGIISEKM--AEVGMIAGGDPLFTII-KGGILEWRA 268

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            + PK I  V  G    V              +++ ++  I    DNN Q   Y      
Sbjct: 269 DIDPKLIGEVNVGTPVQVSL--------PGGDSVMGEVSRIAPTADNNRQITIY------ 314

Query: 393 ITDLAFSDNNIELRNGF 409
               A    N ++R G 
Sbjct: 315 ----ASLAANAKVRAGM 327



 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/118 (9%), Positives = 43/118 (36%), Gaps = 3/118 (2%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFLNNK 123
           I++  VE G ++  G  L  F+       +   +  +   +  +     + + +  L + 
Sbjct: 131 IERILVEEGQRVKAGQILAVFDTDAMEQQVLQAEADVAEAKATLANATADAARVLPLIDI 190

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
             + ++  +      L       ++ +++    +S    ++   ++ + S  +  + +
Sbjct: 191 DAISKQEADRYRTAKLQAQASLQASKARLSTQRLSVNNANVVAPVSGIISEKMAEVGM 248


>gi|298480622|ref|ZP_06998818.1| multidrug resistance protein [Bacteroides sp. D22]
 gi|298273056|gb|EFI14621.1| multidrug resistance protein [Bacteroides sp. D22]
          Length = 346

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 54/381 (14%), Positives = 119/381 (31%), Gaps = 91/381 (23%)

Query: 48  GEILNEDNVVEIKSPF------SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           G +   DN    +          G IKK   E    + +G  LL  ED E        K+
Sbjct: 36  GNVEYTDNAQVKQHITPVNTRVQGFIKKIYFEEYKPVHKGDTLLVIEDSEF-------KL 88

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +      +   ++                                   ++ + GI++  
Sbjct: 89  RLAQAEADLANAQAG---------------------------------QQITHAGIATTQ 115

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            ++ +    +  + + R + E              ++L   K L +K+AV++   ++ + 
Sbjct: 116 NNIAVNDAGIEEVRVQRANAE--------------RELQRYKKLLDKDAVTRQQYDKVKT 161

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                            + +    E         +    E +  L QN+       + + 
Sbjct: 162 TY---------------DAINARYEQVLRMKHSTSLTKDEQTHRLGQNEAAIRLAQATVD 206

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +         +++   G   +     +    Q  Q ++ IV  +   ++ A     Q+ +
Sbjct: 207 LARLNLSYTVVIATCDGMTGHKGIHEA-QLVQPGQTMVDIV-DNSDLWVIANYRETQLPN 264

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKID-------PIISQQDNNL---QTQEYYEVIL 391
           +K+G  A V F     +    +K ++E I         +I Q +      + ++   V +
Sbjct: 265 IKEG--ADVTFTA-DAVPGVVYKGVVESISDATGAAFSLIPQDNATGNFVKVEQRIPVRI 321

Query: 392 KITDLAFSDNNIELRNGFPAE 412
           ++     +D    LR GF  E
Sbjct: 322 RLQGNE-ADEVHRLRTGFNVE 341


>gi|294794193|ref|ZP_06759329.1| secretion protein HlyD [Veillonella sp. 3_1_44]
 gi|294454523|gb|EFG22896.1| secretion protein HlyD [Veillonella sp. 3_1_44]
          Length = 354

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/215 (10%), Positives = 65/215 (30%), Gaps = 18/215 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--EISRDL 266
             ++Q + +     V  +   ++      +    +     +    +  + L+  +    L
Sbjct: 86  QVIAQINGSDTSAQVQNAEGAVKAAQSAYELAETNAKRYRELYAQQAISKLQLDQAENQL 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                      + L +         + +P  G I       +       Q +  +     
Sbjct: 146 NATSAQLQQAQASLNLSSNQNSYTNLTAPDTGIITAFNI-EAGQVVAAGQSVGTLAAGHD 204

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A +  +++  +  G  AT+ F    D+     + ++ +I P+             
Sbjct: 205 PEAVIA-LPEQELSKIHVGSPATITFWALPDVT---VQGVVREISPVPDPVART------ 254

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           Y V + + +   +   ++L  G       +  ++T
Sbjct: 255 YTVKITLQN---APKEVQL--GMTVNANLSTTDST 284



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 3/106 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFL 120
            G +    V  G  +  G  +      +T+  +   + ++K  +      +T       L
Sbjct: 68  GGRVINKFVNVGDTVQAGQVIAQINGSDTSAQVQNAEGAVKAAQSAYELAETNAKRYREL 127

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +  + +   +  E QL     +     + +      + Y +L  
Sbjct: 128 YAQQAISKLQLDQAENQLNATSAQLQQAQASLNLSSNQNSYTNLTA 173


>gi|282848756|ref|ZP_06258151.1| efflux transporter, RND family, MFP subunit [Veillonella parvula
           ATCC 17745]
 gi|282581542|gb|EFB86930.1| efflux transporter, RND family, MFP subunit [Veillonella parvula
           ATCC 17745]
          Length = 354

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/215 (10%), Positives = 65/215 (30%), Gaps = 18/215 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--EISRDL 266
             ++Q + +     V  +   ++      +    +     +    +  + L+  +    L
Sbjct: 86  QVIAQVNGSDTSAQVQNAEGAVKAAQSAYELAETNAKRYRELYAQQAISKLQLDQAENQL 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                      + L +         + +P  G I       +       Q +  +     
Sbjct: 146 NATSAQLQQAQASLNLSNNQNSYTNLTAPDTGIITAFNI-EAGQVVAAGQSVGTLAAGHD 204

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              I A +  +++  +  G  AT+ F    ++     + ++ +I P+             
Sbjct: 205 PEAIIA-LPEQELSKIHVGSPATITFWALPNVT---VQGVVREISPVPDPVART------ 254

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           Y V + + +   +   ++L  G       +  ++T
Sbjct: 255 YTVKITLQN---APKEVQL--GMTVNANLSTTDST 284



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 3/106 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFL 120
            G +    V  G  +  G  +      +T+  +   + ++K  +      +T       L
Sbjct: 68  GGRVINKFVNVGDVVQAGQVIAQVNGSDTSAQVQNAEGAVKAAQSAYELAETNAKRYREL 127

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +  + +   +  E QL     +     + +      + Y +L  
Sbjct: 128 YAQQAISKLQLDQAENQLNATSAQLQQAQASLNLSNNQNSYTNLTA 173


>gi|258625583|ref|ZP_05720469.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258582136|gb|EEW06999.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 367

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 83/262 (31%), Gaps = 19/262 (7%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               ++    + +     ++   ++ D   +     A     +    +   + +   V  
Sbjct: 44  QESQTAAEIQVPLAKVGYQTFTASQTDKVIELYGRTAPDRQAKIGAEIAGRIIDIKIVKG 103

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             + + + I      +L   +   K  L  + +    A     N   +            
Sbjct: 104 QAVKKDQIIALIDKGDLDAQLERAKAQL-KVRQQEFNAASALKNKGLQGEVAFTNAAAAL 162

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            D  S L+ +++      + +P  G +         ++     P+  I+       I A 
Sbjct: 163 TDAQSSLSTVQRLLANTQVRAPFDGLVETLPI-EKGDFVGIGDPVASII-DLHKLVIEAD 220

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V+ + IQHV+ G +A +RF     I     +  +  I  + S   N       + + +++
Sbjct: 221 VSERHIQHVQLGQSARIRF-----IDGSDTQGKVRYISRLSSPATNT------FAIEVEV 269

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
            +   +     +  G  AEV  
Sbjct: 270 DNPQQA-----IPAGVSAEVEL 286



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 61/200 (30%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I   ++  G  + +   +   +  +    ++  K
Sbjct: 70  DKVIELYGRTAPDRQAK-IGAEIAGRIIDIKIVKGQAVKKDQIIALIDKGDLDAQLERAK 128

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 129 AQLKVRQ----QEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLANTQVRAP 184

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  L   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 185 FDGLVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLGQSA 235

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 236 RIRFIDGSDTQGKVRYISRL 255


>gi|77918427|ref|YP_356242.1| membrane-fusion protein [Pelobacter carbinolicus DSM 2380]
 gi|77544510|gb|ABA88072.1| membrane-fusion protein [Pelobacter carbinolicus DSM 2380]
          Length = 434

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 86/249 (34%), Gaps = 28/249 (11%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND--LNQQERIVYKSTLELRENI 234
           N++++ ++ S     +     D      L  K  +S+ +  +      V  +  EL++ +
Sbjct: 86  NQVEVGSELSGTVDAVYVDDDDRVTKGQLLAKLDLSKFEDAVAHSRAAVEVAEAELQQAL 145

Query: 235 HEQKNMLRHINELYD-----------EANLEFANY-LKEISRDLEQNQRTFADEMSKLTI 282
              +     ++   +           +  +E A   +     D E  +   A+  + L  
Sbjct: 146 ATFEETHAKLDRYREVSRLSGGKVPSKTEMEAAEADVARAKADQENARAGIAEAKANLRS 205

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQ 340
            E    +  I SPI G ++          A   Q   L  +        +   V    + 
Sbjct: 206 DETDLAKAHIRSPIDGVVLERAVDPGQAVAASLQAVTLFTLAEDLSKMELEVDVDEADVG 265

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            VK G  A+     + D     F+A+I ++    S  D  +     Y  +LK+     ++
Sbjct: 266 QVKAGLGASFSVDAWPDRN---FEAVITRVGFNASDDDGVIS----YPAVLKV-----AN 313

Query: 401 NNIELRNGF 409
           +++ LR G 
Sbjct: 314 DDLSLRPGM 322


>gi|26990261|ref|NP_745686.1| secretion protein HlyD family protein [Pseudomonas putida KT2440]
 gi|24985209|gb|AAN69150.1|AE016548_9 multidrug efflux MFS membrane fusion protein [Pseudomonas putida
           KT2440]
          Length = 397

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 71/219 (32%), Gaps = 22/219 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S    L   + ++R +Y N   L+ +    +A L   Q+D    K L +  A++ 
Sbjct: 98  EVALQSAEAKLARSVRQVRGLYSNVDSLKAQLETRQAELRKAQQDFNRRKVLADSGAIAA 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L                     ++ L       + A  + +     +   +  +    
Sbjct: 158 EEL------------------SHARDDLSVAQAAVNSARQQLSTSSALVDDTVVSSHPDV 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               + L        + T+++P+ G +   ++       Q     M ++P     +I A 
Sbjct: 200 MAAAADLRQAYLDHARTTLVAPVTGYVAK-RTVQLGQRLQPGTATMAVIPLD-QVWIDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               Q++ ++ G    +         E K+   ++ +  
Sbjct: 258 FKETQLREMRIGQPVEI--TADVYGSEVKYSGTVDSLGA 294



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 58/165 (35%), Gaps = 9/165 (5%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
            G+ TW+    +     S+ +     NVVEI    +G +     ++G  +  G  LL F+
Sbjct: 34  AGVGTWAWYSIVGRWHESTDDAYVNGNVVEITPLVAGTVTSIGADDGDLVHAGQVLLQFD 93

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             ++       +V++++    +      +  L +  D L+   E+R+ +L     +    
Sbjct: 94  PADS-------EVALQSAEAKLARSVRQVRGLYSNVDSLKAQLETRQAEL--RKAQQDFN 144

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             KV     +     L      +            + S   AL+ 
Sbjct: 145 RRKVLADSGAIAAEELSHARDDLSVAQAAVNSARQQLSTSSALVD 189


>gi|313498515|gb|ADR59881.1| EmrA [Pseudomonas putida BIRD-1]
          Length = 397

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 71/219 (32%), Gaps = 22/219 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S    L   + ++R +Y N   L+ +    +A L   Q+D    K L +  A++ 
Sbjct: 98  EVALQSAEAKLARSVRQVRGLYSNVDSLKAQLETRQAELRKAQQDFNRRKVLADSGAIAA 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L                     ++ L       + A  + +     +   +  +    
Sbjct: 158 EEL------------------SHARDDLSVAQAAVNSARQQLSTSSALVDDTVVSSHPDV 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               + L        + T+++P+ G +   ++       Q     M ++P     +I A 
Sbjct: 200 MAAAADLRQAYLDHARTTLVAPVTGYVAK-RTVQLGQRLQPGTATMAVIPLD-QVWIDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               Q++ ++ G    +         E K+   ++ +  
Sbjct: 258 FKETQLREMRIGQPVEI--TADVYGSEVKYSGTVDSLGA 294



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 58/165 (35%), Gaps = 9/165 (5%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
            G+ TW+    +     S+ +     NVVEI    +G +     ++G  +  G  LL F+
Sbjct: 34  AGVGTWAWYSIVGRWHESTDDAYVNGNVVEITPLVAGTVTSIGADDGDLVHAGQVLLQFD 93

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             ++       +V++++    +      +  L +  D L+   E+R+ +L     +    
Sbjct: 94  PADS-------EVALQSAEAKLARSVRQVRGLYSNVDSLKAQLETRQAEL--RKAQQDFN 144

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             KV     +     L      +            + S   AL+ 
Sbjct: 145 RRKVLADSGAIAAEELSHARDDLSVAQAAVNSARQQLSTSSALVD 189


>gi|59802008|ref|YP_208720.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           FA 1090]
 gi|240017376|ref|ZP_04723916.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           FA6140]
 gi|268595583|ref|ZP_06129750.1| efflux pump protein FarA [Neisseria gonorrhoeae 35/02]
 gi|268597618|ref|ZP_06131785.1| efflux pump protein FarA [Neisseria gonorrhoeae FA19]
 gi|268599869|ref|ZP_06134036.1| multidrug resistance translocase [Neisseria gonorrhoeae MS11]
 gi|268604470|ref|ZP_06138637.1| multidrug resistance translocase [Neisseria gonorrhoeae PID1]
 gi|268682923|ref|ZP_06149785.1| multidrug resistance translocase [Neisseria gonorrhoeae PID332]
 gi|293398304|ref|ZP_06642495.1| multidrug resistance protein A [Neisseria gonorrhoeae F62]
 gi|5852499|gb|AAD54073.1| efflux pump protein FarA [Neisseria gonorrhoeae]
 gi|59718903|gb|AAW90308.1| Efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           FA 1090]
 gi|268548972|gb|EEZ44390.1| efflux pump protein FarA [Neisseria gonorrhoeae 35/02]
 gi|268551406|gb|EEZ46425.1| efflux pump protein FarA [Neisseria gonorrhoeae FA19]
 gi|268584000|gb|EEZ48676.1| multidrug resistance translocase [Neisseria gonorrhoeae MS11]
 gi|268588601|gb|EEZ53277.1| multidrug resistance translocase [Neisseria gonorrhoeae PID1]
 gi|268623207|gb|EEZ55607.1| multidrug resistance translocase [Neisseria gonorrhoeae PID332]
 gi|291611228|gb|EFF40312.1| multidrug resistance protein A [Neisseria gonorrhoeae F62]
          Length = 394

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 113 NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHART 172

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 173 AVSQAQAAVKAALAEESSARAALGGDVSLRE-----------------QPEVQTAIGRLK 215

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                  +  + +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 216 DAWLNLRRTQVRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 273

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 274 MKIGQPAEL 282



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 59/186 (31%), Gaps = 11/186 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 64  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 123

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS---VYRS 163
           R +  T ++       + D+     + R    L   G   +         +S      ++
Sbjct: 124 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARTAVSQAQAAVKA 183

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQE 220
              + +  R+     + L  +  +  A+       L + +          V++  +   +
Sbjct: 184 ALAEESSARAALGGDVSLREQPEVQTAIGRLKDAWLNLRRTQVRAPADGQVAKRSVQVGQ 243

Query: 221 RIVYKS 226
           ++   +
Sbjct: 244 QVAAGA 249


>gi|28899952|ref|NP_799607.1| putative secretion protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363246|ref|ZP_05776115.1| histidine kinase [Vibrio parahaemolyticus K5030]
 gi|260880533|ref|ZP_05892888.1| histidine kinase [Vibrio parahaemolyticus AN-5034]
 gi|260898514|ref|ZP_05907010.1| histidine kinase [Vibrio parahaemolyticus Peru-466]
 gi|28808235|dbj|BAC61440.1| putative secretion protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|308084975|gb|EFO34670.1| histidine kinase [Vibrio parahaemolyticus Peru-466]
 gi|308091976|gb|EFO41671.1| histidine kinase [Vibrio parahaemolyticus AN-5034]
 gi|308112306|gb|EFO49846.1| histidine kinase [Vibrio parahaemolyticus K5030]
          Length = 341

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 72/223 (32%), Gaps = 24/223 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S+ +   +     + ++ + +         +        R+ L+  Q +     +L ++ 
Sbjct: 86  SRPYLLAVKQAKAAYQLAVQQHDVADKQVTEAVAGLDAARSNLTEAQVEYKRTDSLVKRK 145

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             S  DL+  +  +  +   L +     +  + +  E   EA +      +         
Sbjct: 146 LASDQDLDTAKNKLANAQASLEQARATVEKAIANRGEEGAEAAVVQQAAAQ--------- 196

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                     L   E       I SP+ G      +    +     Q L  ++      +
Sbjct: 197 ----------LAQAELNLSYTDITSPVDGIAGEINTH-VGSVVSVGQTLFPVI-LKDSYW 244

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +RA      + H+K G  A V    Y D+    +KA +E++ P
Sbjct: 245 VRANFKETDLTHIKPGMHADVVIDMYPDV---VWKATVEQLSP 284


>gi|224585379|ref|YP_002639178.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224469907|gb|ACN47737.1| putative HlyD-family secretion protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 355

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 19/300 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F  + E L     +            I     ++      +          ++  
Sbjct: 63  VSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSEMRAAQSVV 122

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L S  K     ++L ++ AVS   L+        +   L     +       I 
Sbjct: 123 KQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESARAALETAKAQVSAAKAAIE 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                 Q +   A    +  + +   +   + +P  G + Y + 
Sbjct: 183 AARTSIIQ-------------AQTRVEAAQATERRIVAD--IDDSELKAPRDGRVQY-RI 226

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +Q   +K G  A +      D+R     +
Sbjct: 227 AEPGEVLSAGGRVLNMVDLSD-VYMTFFLPTEQAGLLKIGGEARLVLDAAPDLRIPATIS 285

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            +  +     +  + ++ + +  + V  +I       +   ++ G P             
Sbjct: 286 FVASVAQFTPKTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLDERVPW 345


>gi|161522554|ref|YP_001585483.1| secretion protein HlyD family protein [Burkholderia multivorans
           ATCC 17616]
 gi|160346107|gb|ABX19191.1| secretion protein HlyD family protein [Burkholderia multivorans
           ATCC 17616]
          Length = 468

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/363 (9%), Positives = 101/363 (27%), Gaps = 72/363 (19%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  +  ++++ ++G + W          +       + N + +    SG +
Sbjct: 122 ERKRPGRKPLIILGAIALLLVVGGLVW-WFATRNQESTDDAY--TDGNAIAVAPHVSGYV 178

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V++   + +G  L+  +  +    +D     +      +D  +  LD    +Y   
Sbjct: 179 TRLAVDDNVYVHRGDVLVEIDPRDYRAQVDAAHAQLGLAEAQLDAARVQLDIARVQYPAQ 238

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +   ++ E       +  +  ++     + +  +         R+     + +    + 
Sbjct: 239 YRQARAQIESAEAAYRQALAAQARQRAVDVRATSQQAIDAADAQRASADANVAMAQAQAR 298

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             +L+                                       + I + + ++    + 
Sbjct: 299 TASLVP--------------------------------------QQIRQAETVVEERRQQ 320

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +A  +                             E      T+ +P  G +       
Sbjct: 321 VLQARAQLEQ-------------------------AELNLAYCTMRAPSDGWVTRRNV-Q 354

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             ++ Q    +  IV  +   +I A     Q++ ++ G    V    Y D+        +
Sbjct: 355 LGSFLQPGTSIFSIV--TPRVWITANFKESQLKRMRVGDRVDVSVDAYPDL---DLHGHV 409

Query: 368 EKI 370
           + I
Sbjct: 410 DSI 412


>gi|325108797|ref|YP_004269865.1| hypothetical protein Plabr_2241 [Planctomyces brasiliensis DSM
           5305]
 gi|324969065|gb|ADY59843.1| hypothetical protein Plabr_2241 [Planctomyces brasiliensis DSM
           5305]
          Length = 357

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 124/368 (33%), Gaps = 51/368 (13%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +GE+  E   + +++P  GI++ + V  G  +     L           I +++  +  L
Sbjct: 30  TGEVQVET--MVVRAPVDGILQSWHVAEGETVDPDVLLCEIGGHNLARQIQIQEQEVARL 87

Query: 107 RCHIDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGK--YHSTCSKVFNYGISSVYRS 163
              +   ++ +D  ++     L+      E Q  D L K  YH   +  +   + S   S
Sbjct: 88  EARLAALQAEVDVKVHEHVRELDGDIYQAELQTADLLQKKYYHELEAMAWRDTLESYEES 147

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
             ++LT+      N +D   +S L    +++  K+                         
Sbjct: 148 QNLQLTK------NGVDGPAQSELTDRQINALLKE------------------------- 176

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +T  +     + +   + +++L  +      +    ++  + + +   A     L  L
Sbjct: 177 ESATNAIEATEAQLRICNQRLDKLQQQKQT--LHERVRLAVGVSEVELHLAQSRDTLKQL 234

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            + +EQ+ I S   GTI   +      Y Q  + L  +    +  Y+RA +   Q     
Sbjct: 235 TQEQEQQVIRSTRIGTIANFRRR-PGEYVQAGEVLADMFQLGES-YVRANIPSSQSHQFS 292

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
              T   +FP       +    ++  +    S + +  +T     V L+I          
Sbjct: 293 VDTTVKCQFP-----NGETRTGVVTNVAVATSPETSPTRTATGPTVPLRIEPTG------ 341

Query: 404 ELRNGFPA 411
            L    P 
Sbjct: 342 ALWPQMPV 349


>gi|289679879|ref|ZP_06500769.1| secretion protein HlyD [Pseudomonas syringae pv. syringae FF5]
          Length = 229

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 17/182 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +KR+       +  L +  +I +  W IL                IE SV++ G +    
Sbjct: 1   MKRSRHPRRALLVALCLFPVIAVCAWQILPDSKGSAATVTVTRGTIENSVTALGTLQPRS 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ S  SG I K   + G Q+ +G  L+  +       +D  + +I NL+  +  ++
Sbjct: 61  YV-DVGSQASGQIMKIHAQVGDQVKEGDLLVEIDPSTQKAKLDAARYAIDNLKAQLQEQR 119

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +  +    K    ++       +  D       +  +     +      +      +RS 
Sbjct: 120 ALHELAEQKQQRQKRLAAGGATRAEDVQAA--ESEFRATQARVDMFKAQILEAQAALRSD 177

Query: 175 YL 176
             
Sbjct: 178 EA 179



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 30/87 (34%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL E   +++  L        E      +  +     ++  +    + 
Sbjct: 111 LKAQLQEQRALHELAEQKQQRQKRLAAGGATRAEDVQAAESEFRATQARVDMFKAQILEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   E       I +P++GT+V  
Sbjct: 171 QAALRSDEAALGYTRIFAPMSGTVVAL 197


>gi|121534446|ref|ZP_01666269.1| efflux transporter, RND family, MFP subunit [Thermosinus
           carboxydivorans Nor1]
 gi|121306939|gb|EAX47858.1| efflux transporter, RND family, MFP subunit [Thermosinus
           carboxydivorans Nor1]
          Length = 379

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 73/212 (34%), Gaps = 20/212 (9%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY-LKEISRDLEQNQRT 272
           N+L  Q      + L  R  + + +  L     L+ +  +         I RDL   Q  
Sbjct: 107 NELAAQVMQAEGNLLAARAGLEQAELDLARTEALFKQGAVSVQALDTARIKRDLAFGQVK 166

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A+    L +L    +   I++P  G +   +   S  Y +   P++ +         +A
Sbjct: 167 AAE--GNLALLTARLDNANIVAPRDGIVTK-RYLQSGYYVKAGSPIINLA-DVTSLLAKA 222

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V   Q+  +  G    ++     D   K+F   + +I P  +                 
Sbjct: 223 TVGEAQVSELAVGLPVKIKISALGD---KEFSGTVTRISPAAAM-----------PARTF 268

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAK-NTTLA 423
             ++   + N E++ G  A+V   AK   ++ 
Sbjct: 269 TAEVTIPNKNGEIKAGMFAKVSIPAKVKKSVL 300



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 72/235 (30%), Gaps = 30/235 (12%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISV--SSSGEIL-------NEDNVVEIK 60
            R     +     L ++GIIG   ++ L   +      S G ++          ++V + 
Sbjct: 3   SRKKTLYIVMAITLVLVGIIGYRIYANLAANKERAGRVSQGRVVTVEVASVARRDIVPVM 62

Query: 61  SPFS---------------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           S                  G I +  VE G  +  G  +   +  E    +   + ++  
Sbjct: 63  SFSGNLEPAWSADISAKVDGRIDRMLVEEGDFVKAGQIIAVLDTNELAAQVMQAEGNLLA 122

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL- 164
            R  +  E++ LD    +    + A   +                K     ++ +   L 
Sbjct: 123 ARAGL--EQAELDLARTEALFKQGAVSVQALDTARIKRDLAFGQVKAAEGNLALLTARLD 180

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
              +   R   + +  L+   S       S   +L  + +L  K  V +  +++ 
Sbjct: 181 NANIVAPRDGIVTKRYLQ---SGYYVKAGSPIINLADVTSLLAKATVGEAQVSEL 232


>gi|325289387|ref|YP_004265568.1| secretion protein HlyD family protein [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324964788|gb|ADY55567.1| secretion protein HlyD family protein [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 330

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 114/355 (32%), Gaps = 68/355 (19%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    VE G +I  G P+   +D         ++ +++ L+  +  +++AL  L    
Sbjct: 44  GKITGLPVELGQEIKAGDPIAIIDD-------SKERYALEQLQEALAGKQAALALLQQGA 96

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  E                                         +     +    L ++
Sbjct: 97  EPEEL----------------------------------------KQVQNSVELAGLADE 116

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +      Q+     + L+EK A++Q +L+  +     +   L+    +  N  + +
Sbjct: 117 KA--QETKDRAQEAYHNAQALWEKGAIAQAELDTAKYQADLAENALKTASLQLDNAKQAL 174

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             +      E  +            Q   A    ++  +++   +  I +   GT++  +
Sbjct: 175 ALIQQGTPQEKIDA----------AQAEVAATEIQIRQIQENLAKYKITALYDGTVIS-R 223

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           ++   +       +  +    +   + A V  + +  +  G    VR+ +  D     F 
Sbjct: 224 NYLMGDIISPGFSIADVAAKEERHLV-AYVPREYLSSLSHGQEVDVRYGNTNDKGTVSFI 282

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +     P   Q   N   +    + +K++  A    +  L+ G  AEV+   + 
Sbjct: 283 DVKASYTPKELQTSANKNKES---MKIKVSLAA----DTPLKIGETAEVMIEGRE 330


>gi|306821465|ref|ZP_07455068.1| RND family efflux transporter, MFP subunit [Eubacterium yurii
           subsp. margaretiae ATCC 43715]
 gi|304550480|gb|EFM38468.1| RND family efflux transporter, MFP subunit [Eubacterium yurii
           subsp. margaretiae ATCC 43715]
          Length = 414

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 60/374 (16%), Positives = 108/374 (28%), Gaps = 95/374 (25%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+KK     G  + +G  L T +  +              ++  I+   S L+     Y
Sbjct: 73  GIVKKSYANLGDYVNKGDILFTIDSSD--------------IQMQINQANSGLNLAKANY 118

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +                                          LT   SI      LE  
Sbjct: 119 N------------------------------------------LTVNGSIDSQIQQLEAN 136

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              L+   +   K L   K L+E  AV++ DL+  +  V    L+L              
Sbjct: 137 VENLKIQYNDLLKKLGDTKELYEAGAVAKQDLDNLQNNVNLMKLQLDTA----------- 185

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +          N  KE+S        T     + +           I + ++G I  + 
Sbjct: 186 QKNLTLTKDTIKNNTKEVSS------ATVEQAETGVATARHQLSNTVIRAELSGVISADN 239

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ--IQHVKKGYTATVRFPHYADIREKK 362
                       P   I   S +  ++ K    +  I  +KKG    +       + +K 
Sbjct: 240 VV-DGQMVSMQSPAFVI---SDMNSVKVKFQVSEDIINQIKKGSKVYITI---GSVSDKP 292

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
            ++ I  I  +  +          Y V +KI      +++ +++ G  A V     + T 
Sbjct: 293 IESQISNISYVADKMT------SLYPVEVKID-----NSSHKIKPGMFANVRLVLSDKT- 340

Query: 423 AQEIIHPITDNWPK 436
              +  P+     K
Sbjct: 341 -NVLTLPLDAVMKK 353


>gi|86606827|ref|YP_475590.1| RND family efflux transporter MFP subunit [Synechococcus sp.
           JA-3-3Ab]
 gi|86555369|gb|ABD00327.1| efflux transporter, RND family, MFP subunit [Synechococcus sp.
           JA-3-3Ab]
          Length = 451

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/308 (11%), Positives = 80/308 (25%), Gaps = 57/308 (18%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V+ G Q+  G+ +   +  +                                 
Sbjct: 103 GRVLELPVQEGQQVAAGSLIARLDVSDVQ------------------------------- 131

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                              +      +     +      L      +R        ++ +
Sbjct: 132 ----------------AAQQQAQAQRQQAEAQLQQAQAGLLAAQAGVRGAEEALRQVQAQ 175

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                A L   +     M+ L  + AV+Q  ++Q    V      L +     +   + +
Sbjct: 176 KQQAEAELQEARLHQERMQKLHAEGAVAQAQVDQANTRVAVLLGRLAQLEAGIQQAEQGL 235

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +   +               + + Q   A   + +   +      T+++P AG +   +
Sbjct: 236 TQAQAQLAQAKGR--------IPEVQAAMAQAQAGVAQAQANLAYGTLVAPFAGVVTR-K 286

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                  A   QP++++   S+       V       ++ G    +         E   +
Sbjct: 287 YVEVGALAGPGQPIVEL-ESSERLRFSVAVPESLAGQIRVGQGVPISIDSLNQTVEGAIR 345

Query: 365 AIIEKIDP 372
            II   DP
Sbjct: 346 QIIPSADP 353


>gi|264678313|ref|YP_003278220.1| secretion protein HlyD [Comamonas testosteroni CNB-2]
 gi|262208826|gb|ACY32924.1| secretion protein HlyD [Comamonas testosteroni CNB-2]
          Length = 437

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/375 (10%), Positives = 96/375 (25%), Gaps = 79/375 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I     G +     ++   +  G  L+  +  +         V +      + 
Sbjct: 63  VAGNVVQITPQVGGTVISIGADDTDYVRAGQLLVQLDPADY-------LVQLAQAESQLA 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                   L      L      RE  LL                                
Sbjct: 116 QTARQTRTLYANNAPLAAQVAQREADLL-------------------------------- 143

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                           L+A  +    D+   + L    AV + + +  + +   +   + 
Sbjct: 144 ---------------RLKADAAKANDDVARRRPLTATGAVGKEEFDHAKALATAAGNAVA 188

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 +     +     +     A           ++        +K+  +    ++  
Sbjct: 189 AAEAAVRAAKAQLTAAETQTKGTTA-----------EDFPAVMAAAAKVREVYLALQRTR 237

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           +++P+ G +                PL+ +V      ++ A     Q+  ++ G    + 
Sbjct: 238 LIAPVDGFVAKRGV-QLGQRVAAGSPLLTVV-DLHKLWVDANFKESQLADLRMGQKVELS 295

Query: 352 FPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
              Y D     ++  +  +          + +Q       +    V ++I+    +    
Sbjct: 296 ADVYGDKT--SYEGKVVGLGAGTGAAFALLPAQNATGNWIKVVQRVPVRISLEPEALKQH 353

Query: 404 ELRNG--FPAEVLFT 416
            LR G    A+V   
Sbjct: 354 PLRVGLSMDAKVDIR 368


>gi|209517699|ref|ZP_03266536.1| secretion protein HlyD family protein [Burkholderia sp. H160]
 gi|209501874|gb|EEA01893.1| secretion protein HlyD family protein [Burkholderia sp. H160]
          Length = 436

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 77/262 (29%), Gaps = 28/262 (10%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              L   + R+  +Y+N        +   A L+  + DL   + + +  AVS        
Sbjct: 125 EAQLGQTVRRVSGLYVNNDFYAANVTQREADLARARDDLHRREAVADTGAVS-------- 176

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                      E+I   ++ +       D A  +         R   +         +K+
Sbjct: 177 ----------AEDIAHARDAVNVAQAALDAARQQGEANHALTDRTTVEQHPDVQAAAAKV 226

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                   + T+ +P+ G +   +            PLM IVP     ++ A     Q++
Sbjct: 227 RTAWLAYARDTLPAPVTGYVAQRRV-QVGQRVAPGTPLMAIVPLDG-VWVDANFKEVQLK 284

Query: 341 HVKKGYTATVRFPHYAD--IREKKFKA-IIEKIDPIISQQDNNLQTQ-----EYYEVILK 392
           H++ G   T+    Y        + +           +    N         +   V ++
Sbjct: 285 HMRIGQPVTLTSDVYGRGARYHGRIEGFSAGTGSAFATLPAQNATGNWIKIVQRLPVRIE 344

Query: 393 ITDLAFSDNNIELRNGFPAEVL 414
           +     + + + +      +  
Sbjct: 345 LDPAELAAHPLRIGLSMTVDAD 366



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 17/185 (9%), Positives = 57/185 (30%), Gaps = 16/185 (8%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N+V++    +G +     ++   + QG P++T +  +    +   +  +      + 
Sbjct: 77  VSGNLVQLTPQVTGTVVAVNTDDTQIVKQGDPVVTLDPADAKLALADAEAQLGQTVRRVS 136

Query: 112 TE------------KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
                         +   D    + D+  +   +    +      +      V    + +
Sbjct: 137 GLYVNNDFYAANVTQREADLARARDDLHRREAVADTGAVSAEDIAHARDAVNVAQAALDA 196

Query: 160 VYRSLKMKLTRM-RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
             +  +       R+      D++  ++ +R    ++ +D            V+Q  +  
Sbjct: 197 ARQQGEANHALTDRTTVEQHPDVQAAAAKVRTAWLAYARD---TLPAPVTGYVAQRRVQV 253

Query: 219 QERIV 223
            +R+ 
Sbjct: 254 GQRVA 258


>gi|153837623|ref|ZP_01990290.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AQ3810]
 gi|260902259|ref|ZP_05910654.1| histidine kinase [Vibrio parahaemolyticus AQ4037]
 gi|149749015|gb|EDM59834.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AQ3810]
 gi|308110531|gb|EFO48071.1| histidine kinase [Vibrio parahaemolyticus AQ4037]
 gi|328469939|gb|EGF40850.1| multidrug resistance efflux pump [Vibrio parahaemolyticus 10329]
          Length = 341

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 72/223 (32%), Gaps = 24/223 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S+ +   +     + ++ + +         +        R+ L+  Q +     +L ++ 
Sbjct: 86  SRPYLLAVKQAKAAYQLAVQQHDVADKQVTEAVAGLDAARSNLTEAQVEYKRTDSLVKRK 145

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             S  DL+  +  +  +   L +     +  + +  E   EA +      +         
Sbjct: 146 LASDQDLDTAKNKLANAQASLEQARATVEKAIANRGEEGAEAAVVQQAAAQ--------- 196

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                     L   E       I SP+ G      +    +     Q L  ++      +
Sbjct: 197 ----------LAQAELNLSYTDITSPVDGIAGEINTH-VGSVVSVGQTLFPVI-LKDSYW 244

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +RA      + H+K G  A V    Y D+    +KA +E++ P
Sbjct: 245 VRANFKETDLTHIKPGMHADVVIDMYPDV---VWKATVEQLSP 284


>gi|33864408|ref|NP_895968.1| hypothetical protein PMT2144 [Prochlorococcus marinus str. MIT
           9313]
 gi|33641188|emb|CAE22318.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9313]
          Length = 374

 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 76/182 (41%), Gaps = 12/182 (6%)

Query: 17  LKRMTLLSIIGIIGL----ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           L+    L +I ++G     + WSI   + + +   G ++  +N+  ++S  +G +K+F+V
Sbjct: 25  LRPSYWLLLISLLGFSLSILLWSIFGRLPVRIEGRGVLVRTENLQWVQSEINGRLKEFKV 84

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  I QGTPL   + ++    ++L++    N    +    ++LD +  + +   +   
Sbjct: 85  NVGDCIKQGTPLAVIDPVQ----LELEQQKANNQLEILIANDASLDLIAIQREDELRKST 140

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +R +       + ++     ++  +  +   L    T         +  +++   L   +
Sbjct: 141 ARWKLAF----QKNAVSQVEWDQRVQRLSELLYNLETSNNQREQLIIQKQSEIVALEQQI 196

Query: 193 SS 194
           + 
Sbjct: 197 AR 198



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 78/274 (28%), Gaps = 34/274 (12%)

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L   Q+       +   N  S  DL   +R         R  +  QKN +  +   +D+
Sbjct: 103 QLELEQQKANNQLEILIANDASL-DLIAIQREDELRKSTARWKLAFQKNAVSQVE--WDQ 159

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVYNQSFSSS 309
                +  L  +     Q ++    + S++  LE+   +  T+ +P AG +         
Sbjct: 160 RVQRLSELLYNLETSNNQREQLIIQKQSEIVALEQQIARTATVKAPQAGCVTDRHV-QLG 218

Query: 310 NYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Q    L ++            A    K  + ++ G    V        R    +A I
Sbjct: 219 QVVQPGVTLFELERDKDANTLQSLAFFPAKDGKRLRIGQPVRVTPTTTKAQRHGGIEAEI 278

Query: 368 EKIDPI----------------ISQQDNNLQTQEYYEVILKITDL----------AFSDN 401
            K+  +                + +  N        EV   +                  
Sbjct: 279 LKVRRLPVSKEAVINRLYNKESLFKAINTEDEGPLIEVATSLAKDPTTPSGYDWGGSKGP 338

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
           +++L  G P  +    +       +I P+  N  
Sbjct: 339 DLQLTAGTPTTLRVLVEQRRPISYVI-PLLRNLS 371


>gi|304388284|ref|ZP_07370400.1| auxiliary transporter [Neisseria meningitidis ATCC 13091]
 gi|304337715|gb|EFM03868.1| auxiliary transporter [Neisseria meningitidis ATCC 13091]
          Length = 168

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 45/157 (28%), Gaps = 14/157 (8%)

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           R ++ I +  +G I    +         S+ L+ IVP     Y    +       +K   
Sbjct: 6   RSEQIIRAGRSGYI-AIPNVEVGQQVDPSKLLLSIVPERTELYAHLYIPSSAAGFIKPKD 64

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDN-----------NLQTQEYYEVILKITD 395
              +R+  Y   +       +  +      +                ++  Y V +K   
Sbjct: 65  KVVLRYQAYPYQKFGLASGSVVSVAKTALGRQELSGLGMVSSDLAKSSEPVYLVKIKPDK 124

Query: 396 LAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
              +       L+ G   E     +   L + ++  I
Sbjct: 125 STITAYGEEKPLQIGMTLEADILHEKRRLYEWVLELI 161


>gi|254719133|ref|ZP_05180944.1| HlyD family protein secretion protein [Brucella sp. 83/13]
          Length = 347

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 68  LFEIDPQPFQIELDQAKANLAQASEKLAGLALTYKQQLASVAQAKDDVTFAQEQFDRVSA 127

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 128 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 183

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 184 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFFAVGDPAFTLI-- 230

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 231 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITP 275



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 69/231 (29%), Gaps = 24/231 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIKSPFSGIIKKF 70
            + + +   +  I +  W             G+ ++ED+       V I    SG + + 
Sbjct: 3   RRILFIAGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAITPQVSGQVIRV 54

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V+    + +G  L   +       +D  K ++      +     AL +      V +  
Sbjct: 55  AVDPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKLAGL--ALTYKQQLASVAQAK 112

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +    Q  +   +  +     F            +++ +              + L   
Sbjct: 113 DDVTFAQ--EQFDRVSALVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGT 170

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           L    Q+  +    L  K   ++ +L ++   + +        + + +N+ 
Sbjct: 171 LDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPFAGTVTQVENIQ 215


>gi|148547446|ref|YP_001267548.1| secretion protein HlyD family protein [Pseudomonas putida F1]
 gi|148511504|gb|ABQ78364.1| secretion protein HlyD family protein [Pseudomonas putida F1]
          Length = 397

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 71/219 (32%), Gaps = 22/219 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S    L   + ++R +Y N   L+ +    +A L   Q+D    K L +  A++ 
Sbjct: 98  EVALQSAEAKLARSVRQVRGLYSNVDSLKAQLETRQAELRKAQQDFNRRKVLADSGAIAA 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L                     ++ L       + A  + +     +   +  +    
Sbjct: 158 EEL------------------SHARDDLSVAQAAVNSARQQLSTSSALVDDTVVSSHPDV 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               + L        + T+++P+ G +   ++       Q     M ++P     +I A 
Sbjct: 200 MAAAADLRQAYLDHARTTLVAPVTGYVAK-RTVQLGQRLQPGTATMAVIPLD-QVWIDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               Q++ ++ G    +         E K+   ++ +  
Sbjct: 258 FKETQLREMRIGQPVEI--TADVYGSEVKYSGTVDSLGA 294



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 58/165 (35%), Gaps = 9/165 (5%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
            G+ TW+    +     S+ +     NVVEI    +G +     ++G  +  G  LL F+
Sbjct: 34  AGVGTWAWYSIVGRWHESTDDAYVNGNVVEITPLVAGTVISIGADDGDLVHAGQVLLQFD 93

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             ++       +V++++    +      +  L +  D L+   E+R+ +L     +    
Sbjct: 94  PADS-------EVALQSAEAKLARSVRQVRGLYSNVDSLKAQLETRQAEL--RKAQQDFN 144

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             KV     +     L      +            + S   AL+ 
Sbjct: 145 RRKVLADSGAIAAEELSHARDDLSVAQAAVNSARQQLSTSSALVD 189


>gi|228993294|ref|ZP_04153210.1| multidrug resistance protein A [Bacillus pseudomycoides DSM 12442]
 gi|228766362|gb|EEM15005.1| multidrug resistance protein A [Bacillus pseudomycoides DSM 12442]
          Length = 225

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVYNQSFSSSNYA 312
           + A +  E+ +   +N     D++  +T+  +  EQ   +  P   T+V + + +++ + 
Sbjct: 65  KLAEWKAEVGKSYNEN-----DKLGAVTVSGQNGEQTIDVTIPKNATVVQSNA-TTNAFV 118

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+      +   ++ A +    I  V+KG    V    Y D         +E++  
Sbjct: 119 GAGSPIAYAYDMND-LWVTANIEETDIDSVQKGQEVDVYVDAYPDTT---LTGKVEQVGL 174

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 175 TTANTFSMLPSSNATANYTKVTQVVPVKVSLDHSKSVNIVPGMNVTVRIH 224


>gi|190150163|ref|YP_001968688.1| hypothetical protein APP7_0894 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307263502|ref|ZP_07545117.1| hypothetical protein appser13_9180 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189915294|gb|ACE61546.1| hypothetical protein APP7_0894 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306871145|gb|EFN02874.1| hypothetical protein appser13_9180 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 353

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 107/324 (33%), Gaps = 32/324 (9%)

Query: 103 IKNLRCHIDTEKSALDFL----NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           I ++   I+ E+  +  L      +  + E    S+ + L+        +        I+
Sbjct: 33  IASVNGRIEVERLDIASLYAGRVEEIYIQEGQDVSKNQPLVRLSSSQSQSQVNSAQAQIA 92

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +   S+     + R    +      + +  +   +  + +L+  KNL   N +S ++L +
Sbjct: 93  AAEASVNNAQAQKRRATESVSRANAEIAAQQQKANIAKLELSNAKNLHHDNLISSSELER 152

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           ++     S   +      +      I +                   + Q + T     +
Sbjct: 153 RQANYKASLAAVETAKAAKAEAQATITQAQ---------------ATISQAEATVNQAKA 197

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                +   +   I +P+ G I   +  +  +       ++ ++      Y+   +   Q
Sbjct: 198 FAEQADSQNDDMLIRAPLDGRI-EYKIATLGSVVGIGGKVVSLL-DPSTVYLNVFLPTHQ 255

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKI 393
              V+    A ++      +    F A +  +         S + +  +++  +++ L+I
Sbjct: 256 SNLVRLNDEARIKIDGSDFV----FPAKVVFVASEAQFTPKSVETSEERSKLMFKIKLQI 311

Query: 394 -TDLAFSDNNIELRNGFPAEVLFT 416
            TD+A    N+ L+ G  A     
Sbjct: 312 PTDIAIQHKNL-LKGGMTAMGYVK 334


>gi|312958231|ref|ZP_07772753.1| HlyD family secretion protein [Pseudomonas fluorescens WH6]
 gi|311287497|gb|EFQ66056.1| HlyD family secretion protein [Pseudomonas fluorescens WH6]
          Length = 352

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 79/255 (30%), Gaps = 17/255 (6%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            + +  L+N ++ L    S   +    +     + A ++++LN+   +       ++ N 
Sbjct: 93  LVAQAQLKNATATLERQSSVIAQAQATVAADRAEVAFAEHELNRYNHLAGVGAGTVQ-NA 151

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEIS---RDLEQNQRTFADEMSKLTILEKTREQKT 291
            + K  +        ++    A   K++       +  +       + L +         
Sbjct: 152 QQAKTRIDQATARLAKSTAVLAAERKQVEILTAQRDAAEGGLKRAQAALEMASYQLSYTR 211

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I++P+ G +   ++     Y      ++ +VP ++   + A     Q+ H+  G +  VR
Sbjct: 212 IVAPVDGMV-GERAVRVGAYVTPGSKILAVVPLAEAYVV-ANFQETQLSHMHAGQSVQVR 269

Query: 352 FPHYA--------DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
                                     + P  +  +     Q    + +KI          
Sbjct: 270 VDSLDGELLNGHLQSLAPATGVTFAAVKPDNATGNFTKVVQ---RIPVKIVLEPNQPLTE 326

Query: 404 ELRNGFPAEVLFTAK 418
            LR G   E     +
Sbjct: 327 RLRVGMSVEASVDTQ 341



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 43/149 (28%), Gaps = 12/149 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLID-------LKKVSIKNLRCHIDTE---- 113
           G IK   VE+  ++  G  L   +D +             + +  +KN    ++ +    
Sbjct: 54  GFIKDVLVEDNQRVKAGQLLALIDDRDFRAAAQAADADTLVAQAQLKNATATLERQSSVI 113

Query: 114 -KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            ++      ++ +V     E      L  +G      ++     I      L      + 
Sbjct: 114 AQAQATVAADRAEVAFAEHELNRYNHLAGVGAGTVQNAQQAKTRIDQATARLAKSTAVLA 173

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           +       L  +       L   Q  L M
Sbjct: 174 AERKQVEILTAQRDAAEGGLKRAQAALEM 202


>gi|282890148|ref|ZP_06298679.1| hypothetical protein pah_c013o058 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499999|gb|EFB42287.1| hypothetical protein pah_c013o058 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 352

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 71/193 (36%), Gaps = 5/193 (2%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L P +  +S  G +      +++ +P + II+K  V  G ++ +G  L   E+ +    +
Sbjct: 42  LSPFKSYISGVGVVQPVSGNIQVGTPVNRIIEKVFVTVGEKVKKGDILFKLENKDLMADL 101

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            +K+++ K+ +  +      L+ L +  D+       +  Q      K            
Sbjct: 102 LVKQMAYKSAKARLQ----KLEALPHPEDLASAEAALQSAQTEMNAAKSQFDMVLSLPDS 157

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +        +  R +       + E K   +++       ++   + +F K  V+    
Sbjct: 158 RAISQEESDRRYFRYQQAKDQYREAEAKFEKVKSGTWKPDLEIANYETMFAKANVTAIQ- 216

Query: 217 NQQERIVYKSTLE 229
              +R + +S ++
Sbjct: 217 TDIQRTIIRSPID 229


>gi|300776260|ref|ZP_07086118.1| cation efflux system protein [Chryseobacterium gleum ATCC 35910]
 gi|300501770|gb|EFK32910.1| cation efflux system protein [Chryseobacterium gleum ATCC 35910]
          Length = 366

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 68/187 (36%), Gaps = 19/187 (10%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR----EQK 290
            +         +   +  +     L E   DL+  + + ++  S L +            
Sbjct: 125 AQLAEKNYRRQQDLVKHGVGIQKELDEAETDLKNKRTSLSNASSALKVYNSKGGGIGSPL 184

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +PI G IV N+  +       + P+M I+      +I   V  K I+ V  G   +V
Sbjct: 185 VVKAPINGEIVSNRIVNGQYLKGDADPVM-IIAELSKVWISGDVKEKDIRFVSIGDQVSV 243

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           +   Y D         +  I+ ++ +   ++      +V+++       + + +L+ G  
Sbjct: 244 KVSAYPDRN---ITGKVYHINEMVDEDTRSI------KVLIECD-----NPDRKLKPGMF 289

Query: 411 AEVLFTA 417
           A V F+ 
Sbjct: 290 ATVNFST 296


>gi|315607185|ref|ZP_07882189.1| RND family efflux transporter [Prevotella buccae ATCC 33574]
 gi|315251239|gb|EFU31224.1| RND family efflux transporter [Prevotella buccae ATCC 33574]
          Length = 417

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 97/311 (31%), Gaps = 78/311 (25%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
              +  V+  G ++    VV+I     G++ +  V+ G+ + +G  ++   +        
Sbjct: 57  AKFDDYVNVDGRVVPI-QVVQISPEEGGVVLEKVVDEGAHVHKGDIIVRLSNSN------ 109

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                                        L+    + E +L +      +T   +    +
Sbjct: 110 -----------------------------LDLEILNAESELAEKQNMLRNTQISMEQDRL 140

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           ++   +L+++           +D+E K    R   +  ++ L            S+ +  
Sbjct: 141 NNRNEALQLE-----------MDVETKLRAYRHQGALQKEQLN-----------SREEYL 178

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + +     +                 I +   +  L   + ++++S +LE  QR  +   
Sbjct: 179 KAKEAYELAV-----------KKNGLIQQRLKKDGLLRRSQMEQMSDNLESMQRNVSLVR 227

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++   L+       + S I G +               Q +  I   S    + A+V   
Sbjct: 228 ARKAKLD-------VRSSIDGEV-GLLDVELGQSISPGQKIGVINDLSD-YKVEAQVDEH 278

Query: 338 QIQHVKKGYTA 348
            I  V+ G TA
Sbjct: 279 YIDRVRAGLTA 289


>gi|302392664|ref|YP_003828484.1| efflux transporter, RND family, MFP subunit [Acetohalobium
           arabaticum DSM 5501]
 gi|302204741|gb|ADL13419.1| efflux transporter, RND family, MFP subunit [Acetohalobium
           arabaticum DSM 5501]
          Length = 352

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 84/268 (31%), Gaps = 24/268 (8%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                   N +  +R  +    K   ++K++     V   +  +       +   +    
Sbjct: 27  RQQSASSSNLTQQIRPKMVMTLKKGNLVKSIIASGVVESIESQELYFKTNGTIKSINIAE 86

Query: 235 HEQKNMLRHINELY-DEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKTI 292
             + +  + + EL  D+  LE+     E  R  +   Q    +    L I E   E+  +
Sbjct: 87  GAKVSEGQVLMELDNDKQRLEYYKAKNEYERAVINGTQSEVEEAKLNLKIAEDKLEETKL 146

Query: 293 LSPIAGTIVYNQS----FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
            +P +G +         ++      Q + + KI+       +   V     + +  G  A
Sbjct: 147 KAPFSGIVNEIGVEEDSYTE---LDQGKIVAKII-DDSSYQVEVNVDESDSRQLSLGQPA 202

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            +           +F   +  I      +   +       V + IT+         ++ G
Sbjct: 203 RITLEALPGR---EFAGKVVDIGANAESESGIVTL----PVTVSITE-----KPNFIKPG 250

Query: 409 FPAEVLFTAKNTTLAQEIIHPITDNWPK 436
           F A+V        +   ++ PIT  + K
Sbjct: 251 FSADVEIIVNK--IEDRLVVPITAIFSK 276



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 39/95 (41%), Gaps = 3/95 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  S+ +SG +       E+    +G IK   +  G+++ +G  L+  ++ +    ++
Sbjct: 51  GNLVKSIIASGVVE-SIESQELYFKTNGTIKSINIAEGAKVSEGQVLMELDNDKQR--LE 107

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             K   +  R  I+  +S ++       + E   E
Sbjct: 108 YYKAKNEYERAVINGTQSEVEEAKLNLKIAEDKLE 142


>gi|254510816|ref|ZP_05122883.1| transporter, MFP family [Rhodobacteraceae bacterium KLH11]
 gi|221534527|gb|EEE37515.1| transporter, MFP family [Rhodobacteraceae bacterium KLH11]
          Length = 410

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 1/159 (0%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V I     G + +  V N  Q+  G P+   ED   T  ++     I  ++  +   +
Sbjct: 73  RTVTILPQLGGRVSEVYVRNNEQVTAGQPIFRIEDFTQTAQVEAAHAQIAQVQASLKVAE 132

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           + L            A +   E L           S V    I  +   +  +  ++ + 
Sbjct: 133 TDLAEAEAGIAGARAALDQALEDLERNTTLRDEGSSAVRLAEIDRLENLVAEREAKVTAA 192

Query: 175 YLNRLDLENKSSLL-RALLSSHQKDLTMMKNLFEKNAVS 212
              R  +  +   L  A L+S    L       +K  +S
Sbjct: 193 ISKRAAVVQQIEELIPAQLASANAQLDAALTELDKTVIS 231


>gi|206602315|gb|EDZ38796.1| Probable secretion protein (HlyD) [Leptospirillum sp. Group II
           '5-way CG']
          Length = 329

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 75/223 (33%), Gaps = 17/223 (7%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L +K+     DL ++E+      L  ++ + E    L+ + ++             ++ 
Sbjct: 110 QLLKKDLSRLKDLFRREKDEKDRYLRSKDLLQEHFISLQKLEDVRTRWE--------KVR 161

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
               + Q   A E   L + E     +T+ +PI G +            +  QP++ ++ 
Sbjct: 162 AKRHELQGAIAAEEEALEVTEVHPRNETVFAPIGGQVAQRLVN-LGETVRPRQPIVSLIN 220

Query: 324 HSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYA-DIREKKFKAIIEKIDPIISQQDNN 380
            +     ++ A V   Q+  +K G    +    +  D         I       SQ    
Sbjct: 221 TNDLSSIWLDAFVRETQVWKIKPGQKVRIHIDSWPKDTFYGHVLEFIPAASQAFSQLPAQ 280

Query: 381 LQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTT 421
                + +V+ +I      D   N  +  G  AEV     + T
Sbjct: 281 NAAGTFVKVVQRIPVRIVFDGLKNRTILPGMSAEVWI---DRT 320



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 39/118 (33%), Gaps = 12/118 (10%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT-----------DLIDL 98
           +  +  +  + S   G I    V  G  + +G  L T +    T               L
Sbjct: 52  VYVQGKITLVSSSVGGRIIALNVNEGDPVRRGDILATVDRTGETYQRTHNAGKNLQAYQL 111

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            K  +  L+     EK   D      D+L++ F S ++ L D   ++    +K     
Sbjct: 112 LKKDLSRLKDLFRREKDEKDRYLRSKDLLQEHFISLQK-LEDVRTRWEKVRAKRHELQ 168


>gi|317480001|ref|ZP_07939115.1| HlyD family secretion protein [Bacteroides sp. 4_1_36]
 gi|316903839|gb|EFV25679.1| HlyD family secretion protein [Bacteroides sp. 4_1_36]
          Length = 296

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 83/247 (33%), Gaps = 33/247 (13%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +Y         ++S+   R D+  + +  +  +   +++   + NL    A +Q  L+ 
Sbjct: 68  QLYLKKLQLEASVKSVEGQRPDILKQVAATQEQIVQARRERDRVSNLLRVGAANQKQLDD 127

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E ++     +L       +N  R +        ++ A                      
Sbjct: 128 AESLLEVLRKQLDAQNSTLRNSDRSLTWQSSSVGIQVAQ--------------------- 166

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               +E    +  I SP+ GT++  +   +   A    PL K+    +  Y+RA +T +Q
Sbjct: 167 ----IEDQLRKCHITSPLTGTVLA-KYAEAGELAAPGTPLFKMA-DMEQIYLRAYITSEQ 220

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKI 393
           +  +K G    V +  Y     +++  ++  I              + +    Y V + +
Sbjct: 221 LAEIKLGQQVKV-YADYGKDVRQEYPGVVTWISDTSEFTPKTILTKDERANLVYAVKIAV 279

Query: 394 TDLAFSD 400
            +     
Sbjct: 280 KNDGMLK 286


>gi|312890733|ref|ZP_07750266.1| secretion protein HlyD family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311296780|gb|EFQ73916.1| secretion protein HlyD family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 351

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 84/296 (28%), Gaps = 28/296 (9%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E     + + L+    + +    +           ++ +  +++ +   N    +     
Sbjct: 72  ENEHVKQGQLLVKIDPRDYQVKLEQAMAAQKGASATIGVSQSQIYTTAANSSSAKANVET 131

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +  L   ++D     NL +  +++Q    Q +     +    +    + K  L  +   
Sbjct: 132 AKVKLLQSKRDYDRYANLVKDGSITQQQFEQAQVTRDAAQAAYQAAQDQYKAALEQV--- 188

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                       K     L         + + +   +       I SP +G +       
Sbjct: 189 ------------KGTRNQLNVTNTGVTAKQADVDFAKLQLSYTDITSPASGIVSKKNV-Q 235

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  Q L  +V +    YI A     Q+ H++ G    V          +K +  +
Sbjct: 236 KGQLVQAGQTLFSVV-NDNSLYITANFKETQLAHLRSGEKVEVEVDGLP---GEKIEGEV 291

Query: 368 EKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLF 415
               P    +      +  T  Y +V+    +KI      +    LR G       
Sbjct: 292 YNFSPATGAKFSLLPPDNATGNYVKVVQRIPVKIKIKTTPEIMARLRPGMSVTASV 347



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/348 (12%), Positives = 107/348 (30%), Gaps = 23/348 (6%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K N    +    LL    + G+  +      E +  +      + ++  + +   G +  
Sbjct: 12  KPNRVMPIILGLLLIAGIVFGVKEYIYFSKHEDTDDAQ----IDGDISPVVARVGGYVDS 67

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
              E    + QG  L+  +  +    ++    + K     I   +S +          + 
Sbjct: 68  ILFEENEHVKQGQLLVKIDPRDYQVKLEQAMAAQKGASATIGVSQSQIYTTAANSSSAKA 127

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             E+ + +LL     Y    + V +  I+      + ++TR  +    +   +   + L 
Sbjct: 128 NVETAKVKLLQSKRDYDRYANLVKDGSITQQQFE-QAQVTRDAAQAAYQAAQDQYKAALE 186

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            +  +  +       +  K A    D  + +      T      + ++      + +   
Sbjct: 187 QVKGTRNQLNVTNTGVTAKQA--DVDFAKLQLSYTDITSPASGIVSKKNVQKGQLVQAGQ 244

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI------LSPIAGTIVYN 303
                  +    I+ + ++ Q        K+ +       + I       SP  G     
Sbjct: 245 TLFSVVNDNSLYITANFKETQLAHLRSGEKVEVEVDGLPGEKIEGEVYNFSPATGAKFSL 304

Query: 304 Q--SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
                ++ NY +  Q +           I+ K TP+ +  ++ G + T
Sbjct: 305 LPPDNATGNYVKVVQRI--------PVKIKIKTTPEIMARLRPGMSVT 344


>gi|227540206|ref|ZP_03970255.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227239930|gb|EEI89945.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 382

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 54/190 (28%), Gaps = 17/190 (8%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            K+ L + +  +++        E   + +      L     DL   Q   A   + LT  
Sbjct: 110 AKANLNIAQANYDRVQTDLKRYEKLAQQDAIAKQTLDYAKTDLANQQAQVASAKAALTTA 169

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV- 342
                +  I +P AGT+       +         LM  +  +    +  +V  K I    
Sbjct: 170 NTNLARSVIRAPFAGTV-GISQVRAGALVSAGTTLMNTISSNDPIAVEIQVNEKDISKFT 228

Query: 343 ---KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
                  ++ +           +    I  +D  I      L+              AF+
Sbjct: 229 ALRNSHKSSAISLTLPDGTEYPE-HGTIHTVDRAIDPNTGTLKV-----------RAAFN 276

Query: 400 DNNIELRNGF 409
           + N  L  G 
Sbjct: 277 NVNRSLVAGM 286



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 63/189 (33%), Gaps = 30/189 (15%)

Query: 22  LLSIIGIIGLITW------------SILLPIEISV----------SSSGEI-----LNED 54
           LL+   I   + W            +   P E  V            +G I     +   
Sbjct: 6   LLTAFFIGSALVWQSCGNKDAKQQGAAQAPAERVVPVTTAVVNEEIVTGNITYPASVVAL 65

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           N  E+++  +G I    V +G+ + +G  L   + I  T  +D  K ++   + + D  +
Sbjct: 66  NETELRAEVNGYITNIYVADGAVVSKGQKLYEIDGIRYTAAVDQAKANLNIAQANYDRVQ 125

Query: 115 SAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           + L   + L  +  + ++  +  +  L +   +  S  + +     +     ++      
Sbjct: 126 TDLKRYEKLAQQDAIAKQTLDYAKTDLANQQAQVASAKAALTTANTNLARSVIRAPFAGT 185

Query: 172 RSIYLNRLD 180
             I   R  
Sbjct: 186 VGISQVRAG 194


>gi|187477509|ref|YP_785533.1| multidrug resistance protein MdtN [Bordetella avium 197N]
 gi|115422095|emb|CAJ48619.1| putative HlyD-family component of efflux pump [Bordetella avium
           197N]
          Length = 350

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 57/428 (13%), Positives = 133/428 (31%), Gaps = 101/428 (23%)

Query: 10  KRNHPASLKRMTLLSIIGIIGL---ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             + P + +R  ++ +I I+ L   + W+    I  +   S + +   NV  + S   G 
Sbjct: 4   PHSEPGNRRRAAVVILIVIMVLAIGLGWAYFARI-GARPLSEDAVITANVARMASSVPGR 62

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I++  V+  S++ QG  L + +        +  ++ ++  R  +   ++AL         
Sbjct: 63  IQQLAVQENSKVTQGELLFSVDP-------EFYQLQVEQARAGLQAAEAALA-------- 107

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                            +  S  ++  N  I+S                L R        
Sbjct: 108 ----------------TRKRSVSAESSNAAIASEQVERARINAAQAGQTLQR-------- 143

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                          ++ L  K  V+   ++    +   +   L+E + +Q         
Sbjct: 144 ---------------LQGLLPKGYVTAQQVDDARTLKRNADTSLKEALAQQ--------- 179

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                     +  + +  D +      A   + L I E+      + +P  G +V     
Sbjct: 180 ----------DAARSLVGDTDAALAVVAQNRATLAIAERQLRDTQVRAPNDGRVVGLSI- 228

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           ++ +Y   +Q    ++  +   +  A     ++  +K G  A V        R +    +
Sbjct: 229 ANGDYLVPAQSAFTLI-DTTRWWASAGFLETELSAIKPGACARVYVAA---DRSRPIAGV 284

Query: 367 IEKID---------------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           ++ I                P + +  N ++  + + V + + D       +    G  A
Sbjct: 285 VDSIGWGVASEDLIPIPRSLPYVPKTLNWVRVGQRFPVRVLLKDPPPELMRV----GGSA 340

Query: 412 EVLFTAKN 419
            V+     
Sbjct: 341 TVIIHTDE 348


>gi|294626551|ref|ZP_06705149.1| multidrug resistance efflux pump [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292599118|gb|EFF43257.1| multidrug resistance efflux pump [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 397

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 83/268 (30%), Gaps = 28/268 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y      + + S     L S + D    K+L    A+S 
Sbjct: 97  EVAVQQAEANLAKTVRQVRGLYRTVEGAQAELSAREVTLRSARSDFARRKDLAATGAISN 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      +  +   +  +    +     +++                      NQ   
Sbjct: 157 EELAHARDELAAAEAAVSGSRESLERNRALVDDSA------------------VANQPDV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L        +  +++P++G +   +S       Q    LM +VP  +  ++ A 
Sbjct: 199 QTAAAQLRQAYLNHARTGVVAPVSGYVAR-RSAQVGQRVQPGSVLMAVVPL-EQVWVEAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----E 385
               Q++H++ G    +    Y        + +++ +            N         +
Sbjct: 257 FKETQLKHMRLGQEVELHSDLYGGGVSYTGRIQSLGLGTGSAFSLLPAQNASGNWIKIVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
              V + +     + N + +      EV
Sbjct: 317 RVPVRIAVDSEQLASNPLRIGLSMKVEV 344



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 75/215 (34%), Gaps = 21/215 (9%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSP 62
                  A+L+ + ++ I+ IIGL+ W  L+       + +         + N V+I   
Sbjct: 14  AAPSKRRAALRIVAIVVILAIIGLVVWYFLVGRWHEDTDDA-------YVQGNQVQITPM 66

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +     E+G ++ +G  L+  +  +T       +V+++    ++      +  L  
Sbjct: 67  VGGTVVSIGAEDGMRVERGQLLVQLDPADT-------EVAVQQAEANLAKTVRQVRGLYR 119

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLD 180
             +  +    +RE  L      +           IS   +  +         ++  +R  
Sbjct: 120 TVEGAQAELSAREVTLRSARSDFARRKDLAATGAISNEELAHARDELAAAEAAVSGSRES 179

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           LE   +L+     ++Q D+        +  ++   
Sbjct: 180 LERNRALVDDSAVANQPDVQTAAAQLRQAYLNHAR 214


>gi|197248525|ref|YP_002148510.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
 gi|197212228|gb|ACH49625.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Salmonella enterica subsp. enterica serovar Agona str.
           SL483]
          Length = 355

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 81/300 (27%), Gaps = 19/300 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F  + E L     +            I     ++      +          ++  
Sbjct: 63  VSEGQFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSEMRAAQSVV 122

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L S  K     ++L ++ AVS   L+        +   L     +       I 
Sbjct: 123 KQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESARAALDTAKAQVSAAKAAIE 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                 Q +   A    +  + +   +   + +P  G + Y + 
Sbjct: 183 AARTSIIQ-------------AQTRVEAAQATERRIVAD--IDDSELKAPRDGRVQY-RV 226

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +Q   +K G  A +      D+R     +
Sbjct: 227 AEPGEVLSAGGRVLNMVDLSD-VYMTFFLPTEQAGLLKIGGEARLVLDAAPDLRIPATIS 285

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            +  +     +  + ++ + +  + V  +I       +   ++ G P             
Sbjct: 286 FVASVAQFTPKTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLDERVPW 345


>gi|194367151|ref|YP_002029761.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194349955|gb|ACF53078.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 360

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 94/319 (29%), Gaps = 23/319 (7%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +    +  K      A E  + Q +           + +   + +    L     ++ + 
Sbjct: 42  ADYTLVAPKIPGFVSAVEVEDNQSVKAGDVLARIDDRDYQVALQAARADLANARAQLANA 101

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                  ++     RA +   + +LT+        +  Q    +  R    +    ++  
Sbjct: 102 QAALAQQDSLIEQARASVDVSRSELTLA-------SADQQRYRELARDGAGTVQNAQQAQ 154

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK-TREQKTIL 293
            +Q     H+ +   +A L  A    +I     Q  +             +       + 
Sbjct: 155 SKQAVASAHLQQ--GQAALSTARQRTDILSAGVQAAQAAVQRAEAAQARAELDLSHTVLR 212

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +PI G +   ++     Y     P+  +VP  +   + A     Q+  ++ G    ++  
Sbjct: 213 APIDGMV-GRRAVRVGAYLTPGTPVAAVVPLKRAFVV-ANFQETQMTRMQAGQQVELKVD 270

Query: 354 HYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIE----L 405
            +     K  +  I+ I P      +       T  + +V+ +I      +        L
Sbjct: 271 VFP---GKPLRGHIDSIAPATGVTFAAVAPENATGNFTKVVQRIPVKIVLEPGQPLLDQL 327

Query: 406 RNGFPAEVLFTAKNTTLAQ 424
           R G   E      +   AQ
Sbjct: 328 RAGMSVEASVDLGSRARAQ 346



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 39/125 (31%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +   +VE+   +  G  L   +D +    +   +  + N R  +   ++AL   ++  
Sbjct: 53  GFVSAVEVEDNQSVKAGDVLARIDDRDYQVALQAARADLANARAQLANAQAALAQQDSLI 112

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +    + +    +L               +   +            + S +L +      
Sbjct: 113 EQARASVDVSRSELTLASADQQRYRELARDGAGTVQNAQQAQSKQAVASAHLQQGQAALS 172

Query: 185 SSLLR 189
           ++  R
Sbjct: 173 TARQR 177


>gi|226315380|ref|YP_002775276.1| hypothetical protein BBR47_57950 [Brevibacillus brevis NBRC 100599]
 gi|226098330|dbj|BAH46772.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 422

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 56/384 (14%), Positives = 126/384 (32%), Gaps = 84/384 (21%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           +   +E ++ +SG +   +      +   G ++ F ++ G ++ +G  +   +  + ++ 
Sbjct: 42  VTADLESTILTSGLVKVRNEHTLFANYA-GELRNFSIKEGDKVTKGQVIGNIDMSDVSNE 100

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           I   +  I     +I      ++          +     +EQL     +Y +        
Sbjct: 101 IMDIEAQITIQEANIARLSKGVE---------PEEVTKMQEQLAQHEREYQTALK----- 146

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                                   D +   SL  A +S+ Q      + L  + A S+  
Sbjct: 147 ------------------------DYQRTQSLFTAGVSTQQAVEEAKQKL--QTAESRVR 180

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + +Q+ ++ +   +        K  +R       + NLE A Y                 
Sbjct: 181 VAKQDLLLKQKGPD--------KAEIRSYEAQIQKLNLEKAKY----------------- 215

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                   EK R Q +I+SPI GT++  +      Y  + + ++ +   + +  + A V 
Sbjct: 216 --------EKQRVQSSIVSPIEGTVLSMKV-KQGKYLSKGEEILTVGDTNDVM-VEAAVG 265

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              ++ +K G  A V          ++ +  + +I P+               V + I +
Sbjct: 266 ESDLRKIKIGQDAVVSGISLG---GEQLQGKVLRISPMAVTSKEPGGESTGVPVAVHINE 322

Query: 396 LAFSDNNIELRNGFPAEVLFTAKN 419
                    L+ GF  +V    + 
Sbjct: 323 -----TREYLKPGFHVDVNIVLQK 341


>gi|188533077|ref|YP_001906874.1| Multidrug resistance secretion protein A [Erwinia tasmaniensis
           Et1/99]
 gi|188028119|emb|CAO95976.1| Multidrug resistance secretion protein A [Erwinia tasmaniensis
           Et1/99]
          Length = 386

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 91/275 (33%), Gaps = 34/275 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   +L   + +   + +N    +    L +  L     DL   + L   N + + 
Sbjct: 95  QAFEKAQTALATSVRQTHQLIINGKQYQATIELRKTALQQALADLHRREPLGASNLIGKE 154

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           DL      V  +  +L   + +       I     +  LE    +K+ + +L        
Sbjct: 155 DLQHARDAVTTAKAQLDVAMQQYNANQAMI----LDTTLENQPAVKKSAAELRDAWLAL- 209

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                        ++  ++SPI G +   +S    +    + PL+ +VP +   ++ A  
Sbjct: 210 -------------QRTNVVSPIDGYVSR-RSVQVGSQIGTTTPLLAVVPANN-LWVNANF 254

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQ 384
              Q+  V+ G  ATV    Y D     +   +  +D          P  +   N ++  
Sbjct: 255 KETQLAGVRIGQPATVVSDIYGDDV--VYHGKVIGLDMGTGSAFSLLPAQNATGNWIKVV 312

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +   V + +     + + + +  G   +V    ++
Sbjct: 313 QRLPVRIALDAQEVAKHPLRI--GLSTQVKVDTRS 345



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 47/160 (29%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK------- 104
              N  ++ +  +G + K   ++   + +G  L+T +  +     +  + ++        
Sbjct: 53  VAGNQAQVMAQVAGSVNKVWFDDTDYVKKGDVLVTLDHTDAGQAFEKAQTALATSVRQTH 112

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    ++ ++               RE      L               +     +
Sbjct: 113 QLIINGKQYQATIELRKTALQQALADLHRREPLGASNLIGKEDLQHARDAVTTAKAQLDV 172

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            M+        +    LEN+ ++ ++        L + + 
Sbjct: 173 AMQQYNANQAMILDTTLENQPAVKKSAAELRDAWLALQRT 212


>gi|304315845|ref|YP_003850990.1| secretion protein HlyD [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302777347|gb|ADL67906.1| secretion protein HlyD family protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 247

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 61/188 (32%), Gaps = 16/188 (8%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           ++ + +   +      D A L +           +          +   +     ++ TI
Sbjct: 71  DVSQYEEQAKEAKAALDMAKLNYEQIKNGPKEQADIANLKVEQAQAAYDLSNLMVKKGTI 130

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +PI+GTI     F+          + + V      +I+  V  K +  V      TV  
Sbjct: 131 TAPISGTITDI-YFNVGEIETPGGSIAE-VSDLNNLWIKIYVPEKYLYKVSLNKDVTVNV 188

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRN 407
               +   KK    +  I P       N  T+       YEV ++I      DN  EL+ 
Sbjct: 189 ----NSINKKISGKVVYISPNGEFTPKNTTTESSKEDIVYEVKIQI-----KDNVKELKP 239

Query: 408 GFPAEVLF 415
           G  A+V  
Sbjct: 240 GMLADVTI 247



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 2/87 (2%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG I  E   V ++S  SG I    V  G Q+ +G  +   +  +  +     K ++   
Sbjct: 32  SGTI--ESTTVNVQSEISGRIVDLYVSTGEQVKKGDKIALLDVSQYEEQAKEAKAALDMA 89

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFES 133
           + + +  K+      +  ++  +  ++
Sbjct: 90  KLNYEQIKNGPKEQADIANLKVEQAQA 116


>gi|332707271|ref|ZP_08427324.1| biotin-requiring enzyme [Lyngbya majuscula 3L]
 gi|332354005|gb|EGJ33492.1| biotin-requiring enzyme [Lyngbya majuscula 3L]
          Length = 143

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 44/107 (41%), Gaps = 1/107 (0%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  K L  + P    R  L  ++  + +I  WS+L  ++ + ++ G +  +   V + + 
Sbjct: 33  YATKELLDSWPQVWTRGLLYFLVVFVSIILPWSMLYKVDETGTARGRLEPKGKTVRLDAA 92

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
            +G + + QV+ G ++  G  L+  +       +      +K     
Sbjct: 93  VAGTVDEIQVKEGEKVEAGQNLVILKSGLVRTELQQVNDKLKGQLSR 139


>gi|195977663|ref|YP_002122907.1| transport protein ComB [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974368|gb|ACG61894.1| transport protein ComB [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 455

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 58/421 (13%), Positives = 145/421 (34%), Gaps = 48/421 (11%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
              EIS+ S+  +     +  I+S  +  I    +++   +  G  L+ ++  +     +
Sbjct: 41  AKKEISIISTATVEPNIILSNIQSTSNNTILTNNLKDNKYVKFGDLLIKYDSRKEGIQQE 100

Query: 98  LKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  + NL   +  ++  K++++  N+++   EK      +  +D+L + ++  + V  
Sbjct: 101 TYQTQLNNLQIQKEQLELLKASIEAGNSQFP--EKDNYGYYQTFIDYLNQINTLSANVNQ 158

Query: 155 Y------GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL---------LSSHQKDL 199
                    ++           ++ +     D ++  S ++            S ++  L
Sbjct: 159 QNENVSSQNTAASNQQVEIENAIKGLTSQISDYQSVRSAIQNGTVVDLDNRAYSIYRSYL 218

Query: 200 TMMKNLFEK--------NAVSQND--LNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           T   +L +           V+Q D  +NQ E  V    ++   +         + + L  
Sbjct: 219 TQTSSLVDNTDKTAVINQFVAQIDSQINQLESSVAGYRIQHAGS----GVQQSYSSTLES 274

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +     A  + ++ ++L        +      + + T  + +I++   G +  NQ F  +
Sbjct: 275 QLASLKAQSITKVEQELSALSNQITELEGTNKLQKNTSSKTSIVANEDGVLHLNQEFIGA 334

Query: 310 NYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKA 365
           N   +     ++ P      +  I   +   +I  +  G TA  RF    D         
Sbjct: 335 NIVPEGTIFAQVYPEMKKGTVVKITGYLPSTEISSISIGDTA--RFSTKDDNGETLDLIV 392

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN-GFPAEVLFTAKNTTLAQ 424
            +  ID   ++  N      Y++V    + L   +   +L   G   + +      +   
Sbjct: 393 KLSSIDNAATKTKNG----NYFKVE---SKLQLKEKEAQLLKYGLEGKFILITGTKSYLN 445

Query: 425 E 425
            
Sbjct: 446 Y 446


>gi|171319162|ref|ZP_02908282.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MEX-5]
 gi|171095642|gb|EDT40602.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MEX-5]
          Length = 453

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 74/203 (36%), Gaps = 8/203 (3%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           + ++R +Y N   L N     RA L++ +  L   K  + +    + DL +   I ++  
Sbjct: 151 VRKVRGLYSNERGLANSIDGARAELAARRTALDKAKADYRR----REDLGRSGAISHEEL 206

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              R+ +   ++            + +       +      +        S+L      R
Sbjct: 207 AHARDTLTSAQSAYAAAQSALATLSEQHQTSKALVDDTAVASHPDVQAAASRLRAAYLAR 266

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +  I++P+ G +   ++           PL+ +VP  +  ++ A  T KQ+ H++ G  
Sbjct: 267 TRTDIVAPVTGYVAK-RTVQVGQRVSPGVPLLAVVPL-RELWVDANFTEKQLDHMRIGQP 324

Query: 348 ATVRFPHYADIREKKFKAIIEKI 370
             +    Y      ++   ++ +
Sbjct: 325 VELTADLYGSNV--RYSGRVQSL 345


>gi|289662948|ref|ZP_06484529.1| multidrug resistance efflux pump [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 397

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 82/268 (30%), Gaps = 28/268 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y +    + + S     L S + D    KNL    A+S 
Sbjct: 97  EVAVQQAEANLAKTVRQVRGLYRSVESAQAELSAREVTLRSARSDFARRKNLAATGAISN 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L                     ++ L         +   F      +      NQ   
Sbjct: 157 EEL------------------AHARDELAAAEAAVSGSRESFERNRALVDDSAVANQPDV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L        +  +++P++G +   +S       Q    LM +VP  +  ++ A 
Sbjct: 199 QTAAAQLRQAYLNHARTGVVAPVSGYVAR-RSAQVGQRVQPGSVLMAVVPL-EQVWVEAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----E 385
               Q++H++ G    +    Y        + +++ +            N         +
Sbjct: 257 FKETQLKHMRLGQEVELHSDLYGGGVNYTGRIESLGLGTGSAFSLLPAQNASGNWIKIVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
              V + +     + N + +      EV
Sbjct: 317 RVPVRIAVDSKQLASNPLRIGLSMKVEV 344



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 75/215 (34%), Gaps = 21/215 (9%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSP 62
                  A+L+ + ++ I+ IIGL+ W  L+       + +         + N V+I   
Sbjct: 14  AAPSKRRAALRIVAIVVILAIIGLVVWYFLVGRWHEDTDDA-------YVQGNQVQITPM 66

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +     E+G ++ +G  L+  +  +T       +V+++    ++      +  L  
Sbjct: 67  VGGTVVSIGAEDGMRVERGQLLVQLDPADT-------EVAVQQAEANLAKTVRQVRGLYR 119

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLD 180
             +  +    +RE  L      +    +      IS   +  +         ++  +R  
Sbjct: 120 SVESAQAELSAREVTLRSARSDFARRKNLAATGAISNEELAHARDELAAAEAAVSGSRES 179

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            E   +L+     ++Q D+        +  ++   
Sbjct: 180 FERNRALVDDSAVANQPDVQTAAAQLRQAYLNHAR 214


>gi|319411205|emb|CBY91610.1| multidrug resistance protein A [Neisseria meningitidis WUE 2594]
          Length = 394

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 113 NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 172

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 173 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 215

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 216 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 273

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 274 MKIGQPAEL 282



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 53/161 (32%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G + K   ++   + +G  L   +D            +L +   +N 
Sbjct: 64  VAGRVVQVTPQKGGTVWKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 123

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 124 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 183

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 184 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRT 224


>gi|300114003|ref|YP_003760578.1| HlyD family secretion protein [Nitrosococcus watsonii C-113]
 gi|299539940|gb|ADJ28257.1| secretion protein HlyD family protein [Nitrosococcus watsonii
           C-113]
          Length = 338

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 100/287 (34%), Gaps = 12/287 (4%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +  G+      +  +  +     ++  +   +  +   +  LE + ++++  L +  + 
Sbjct: 52  FNVPGRIERMLVEEGDKTVPGQRLAVLEQDRFIDRVAAAKAQLEKQQAVVKE-LETGSRP 110

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
             + K   EK A      N ++    + TL   E + E+             ANLE A+ 
Sbjct: 111 EEIKKARAEKEAAEIAFSNARKIYKRRLTLVHTEAVSEETADDAREVRDRAAANLEAAHQ 170

Query: 259 LKEI------SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           + ++        D++  Q       + L + ++  +   I +P  GTI   +        
Sbjct: 171 VWQLAVKGPRQEDIQAAQAEARALAAALALAQEDLKDTEIQAPATGTI-RVRIQEPGAIV 229

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              +P+  +       ++RA V+   +  +  G    + F       E  F+  I  I P
Sbjct: 230 TLGEPVYSLA-LKNPVWVRAYVSEPNLGRIYPGMPVEI-FT--DSYPEHPFQGQIGFISP 285

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   +QT      ++    +  ++ +  LR G P  ++   K 
Sbjct: 286 TAEFTPKTVQTPAVRTSLVYRFRVIIANPDERLRQGMPVTLIIHLKK 332



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 43/124 (34%), Gaps = 5/124 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I++  VE G + + G  L   E     D +   K  ++  +  +   ++      ++ 
Sbjct: 56  GRIERMLVEEGDKTVPGQRLAVLEQDRFIDRVAAAKAQLEKQQAVVKELETG-----SRP 110

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           + ++KA   +E   + F         ++      +V          +R      L+  ++
Sbjct: 111 EEIKKARAEKEAAEIAFSNARKIYKRRLTLVHTEAVSEETADDAREVRDRAAANLEAAHQ 170

Query: 185 SSLL 188
              L
Sbjct: 171 VWQL 174


>gi|239626595|ref|ZP_04669626.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516741|gb|EEQ56607.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 601

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/400 (10%), Positives = 117/400 (29%), Gaps = 53/400 (13%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR-----CHIDTE 113
           I S   G +     E G Q+ +   L   +       +     S+   +        D E
Sbjct: 107 ITSMVEGEVLSADFEEGDQVEKDQVLYEIDKSSMESELTSATNSLTRAQTSYEDAREDYE 166

Query: 114 KSALDFLNNKYDVLE-------------------KAFESREEQLLDFLGKYHSTCSKVFN 154
            +  D+  N Y   +                   K  +   + +++    + S  + +  
Sbjct: 167 DALSDYSGNTYKATDTGYIKELYIHVGDKVGGSTKLADVYSDDVMEIRIPFLSGEAALIG 226

Query: 155 YGISSVYR--SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            G  +V        +L        N+        ++R +  +      +   +     + 
Sbjct: 227 PGSPAVLTLTDTGEQLAGAVKAVANQDITLTGGRIVRNVTITVTNPGGLTTTMKATAQIG 286

Query: 213 Q----------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           +            ++        +++E+   +  + + +     L+          ++  
Sbjct: 287 EFVGSEDGAFEASVDTTMNADLSTSVEVEALLVNEGDYVTKGTPLFRMTEKSADKLVRSY 346

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA---QQSQPLM 319
              L++ + +     +KL   +   +  TI +PI+G ++  ++F   +       S  ++
Sbjct: 347 KDALDKAEESVESAQNKLDSSQDNYDNYTITAPISGQVIA-KNFKVGDNITKNSSSTTVL 405

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
             +           +    IQ VK G    +       +  + F   +  +      +  
Sbjct: 406 ATIYDLSSLTFEMSIDELDIQKVKVGQKVVI--TA-DAMEGQTFSGTVTNVSL----EST 458

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                  Y V + + ++       +L  G   + + T + 
Sbjct: 459 YSNGVSTYPVTVTMDEMG------DLIPGMNVDGIITLEE 492


>gi|150018912|ref|YP_001311166.1| secretion protein HlyD [Clostridium beijerinckii NCIMB 8052]
 gi|149905377|gb|ABR36210.1| secretion protein HlyD [Clostridium beijerinckii NCIMB 8052]
          Length = 217

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 60/170 (35%), Gaps = 5/170 (2%)

Query: 242 RHINELYDEANLEFANYLKEISRDLEQ--NQRTFADEMSKLTILEKTREQKTILSPIAGT 299
             +N  +     + +  L E++ D      +           + + + EQ  + +PI G 
Sbjct: 40  ARVNADFVSVTPQISGKLLELNVDEGDKVTKNEILARQEMNNLPDTSVEQSLVRAPIDGI 99

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           IV  Q  +        Q L+ +V      YI A +   +++ VK G    +    Y   +
Sbjct: 100 IVKKQG-TVGELLSTGQTLITLV-DPTKLYISANIEETKLEKVKVGQQVDITIDEYDSQK 157

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNG 408
                  I +I         +  +  + +V+ ++   +   + + ++  G
Sbjct: 158 FSGKVKTIGEISNSAISLLPSSTSGTFTKVVQRVPIKIELDNFDDKILPG 207


>gi|146276013|ref|YP_001166173.1| multidrug resistance efflux pump-like protein [Novosphingobium
           aromaticivorans DSM 12444]
 gi|145322704|gb|ABP64647.1| Multidrug resistance efflux pump-like protein [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 371

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 55/177 (31%), Gaps = 13/177 (7%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           +L  + A  +  +  Q     ++    R ++     +L        +        + E  
Sbjct: 102 DLLTRLAAERAQVLAQIAAAEQAMAVARIDVGRSGQLLADGLAARRDYENAQIK-VAEHG 160

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L + +       SK+ I    +  + + +P  G I    + + +        L  + P
Sbjct: 161 AKLAEARAKL----SKVDIALGRQSAQVVRAPRDGRIQSLNTAAGATLVSAGDWLATLAP 216

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDP 372
                     V  + +  V+KG            ++F  +  + +  F   +  IDP
Sbjct: 217 DRAERVAELMVDGRDVALVRKGQPVRLHFEGWPAIQFSGWPSVAQGMFDGRVRAIDP 273



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 53/162 (32%), Gaps = 15/162 (9%)

Query: 42  ISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +    GE++    +D V ++ +   G ++++ V +G Q+ +G P+    D +       
Sbjct: 48  QTAPGRGEVIALDPQDRVQQVTALVPGRVERWYVVDGQQVHKGDPIARIIDNDP------ 101

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                 +L   +  E++ +       +           +    L    +      N  I 
Sbjct: 102 ------DLLTRLAAERAQVLAQIAAAEQAMAVARIDVGRSGQLLADGLAARRDYENAQIK 155

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                 K+   R +   ++       + ++RA      + L 
Sbjct: 156 VAEHGAKLAEARAKLSKVDIALGRQSAQVVRAPRDGRIQSLN 197


>gi|56479465|ref|YP_161054.1| putative HlyD-like secretion protein [Aromatoleum aromaticum EbN1]
 gi|56315508|emb|CAI10153.1| putative HlyD-like secretion protein [Aromatoleum aromaticum EbN1]
          Length = 386

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEI----SRDLEQNQRTFADEMSKLTIL 283
           +EL   + + +      N    EAN    + L +         ++         + + ++
Sbjct: 115 IELDAAVQQAEVQQAKANLALAEANYGRTDDLFKRKFLSHTARDEAASQLEVARANMALV 174

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E   E+  I +P AG +V  ++ S  +Y ++   L+ +        +  ++    +  V+
Sbjct: 175 EAHLERTRIRAPFAG-VVGIRNVSIGDYVKEGDDLVNL-EDIATLKVDFRLPENYLARVR 232

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G T  +      + R   F+A +  IDP++ +Q  ++           +      +  +
Sbjct: 233 PGQTLEITSDAIPEQR---FEARVAAIDPLVDEQGRSV-----------VMRATLPNEGL 278

Query: 404 ELRNGFPAEVLFTAKNTT 421
            LR G  A V    +  +
Sbjct: 279 RLRPGMFARVRLILQQRS 296



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/194 (9%), Positives = 51/194 (26%), Gaps = 4/194 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V++ G +   +  V ++   +G I   +   G  + +G  L+  +       +   K ++
Sbjct: 75  VTAVGTLR-SNESVVLRPEVAGRIAAIRFREGGPVRRGEVLIELDAAVQQAEVQQAKANL 133

Query: 104 KNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                     D         +   D      E     +         T  +    G+  +
Sbjct: 134 ALAEANYGRTDDLFKRKFLSHTARDEAASQLEVARANMALVEAHLERTRIRAPFAGVVGI 193

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                    +     +N  D+       R   +   +           +A+ +     + 
Sbjct: 194 RNVSIGDYVKEGDDLVNLEDIATLKVDFRLPENYLARVRPGQTLEITSDAIPEQRFEARV 253

Query: 221 RIVYKSTLELRENI 234
             +     E   ++
Sbjct: 254 AAIDPLVDEQGRSV 267


>gi|114567228|ref|YP_754382.1| multidrug resistance efflux pump-like protein [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
 gi|114338163|gb|ABI69011.1| Multidrug resistance efflux pump-like protein [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
          Length = 392

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 94/296 (31%), Gaps = 49/296 (16%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L+ A  ++  +LL   G        +       +        +++            K  
Sbjct: 59  LQAASTAQVRELLVASGDKVMPGQLLMKLSSPELTAETASARSQLARTEAELQAAGLKMQ 118

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LR  L   + DL   KNL +  A+++ +  + E  V     +LR+ I +Q+  +  +++
Sbjct: 119 SLRLELKQAENDLARKKNLLQSGALARAEYEEAELEVD----QLRKTISQQEAGVSGLSQ 174

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                                      A     L  LE+ R Q  + SP++G I+     
Sbjct: 175 -------------------------QVASLSEMLNGLEEKRGQLQVTSPVSGIILDLPV- 208

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV---------------R 351
                      L ++   +    ++ ++   +I+ VK G +  +               +
Sbjct: 209 KVGQVVAPGTLLAQLG-SAGQLEVKTELLSDEIRRVKIGQSTRITAPVLGEEVLNGQISK 267

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
               A  +      I  ++ P+I   +     Q  YEV + I         + L  
Sbjct: 268 IYPRAYEKTSALGVIQRRV-PVIINLEQIANLQPGYEVRVAI--ETLRKEGVILLP 320



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/140 (9%), Positives = 47/140 (33%), Gaps = 2/140 (1%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
            E+++  +  +++  V +G +++ G  L+     E T      +  +      +    + 
Sbjct: 57  RELQAASTAQVRELLVASGDKVMPGQLLMKLSSPELTAETASARSQLARTEAELQA--AG 114

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           L   + + ++ +   +   ++ L   G       +     +  + +++  +   +  +  
Sbjct: 115 LKMQSLRLELKQAENDLARKKNLLQSGALARAEYEEAELEVDQLRKTISQQEAGVSGLSQ 174

Query: 177 NRLDLENKSSLLRALLSSHQ 196
               L    + L       Q
Sbjct: 175 QVASLSEMLNGLEEKRGQLQ 194


>gi|330825147|ref|YP_004388450.1| RND family efflux transporter MFP subunit [Alicycliphilus
           denitrificans K601]
 gi|329310519|gb|AEB84934.1| efflux transporter, RND family, MFP subunit [Alicycliphilus
           denitrificans K601]
          Length = 449

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 44/151 (29%), Gaps = 14/151 (9%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTY 329
           +  D  + L   E    + +I SPI G ++       +  A   Q   L+ +        
Sbjct: 197 SVQDARAALATDETNVTKASIRSPIDGVVLSRAVEPGNAVAASLQAVTLLTLAEDLSRLR 256

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   V    +  V+ G  A+     Y           +                     V
Sbjct: 257 LEVSVDEADVGAVQPGQQASFTVSAYPSRPYPARTTRVAFGSIKTDN------------V 304

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +  IT L   + ++ LR G  A    T+   
Sbjct: 305 VTYITYLEVDNADLSLRPGMTAAATITSTER 335



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 76/214 (35%), Gaps = 15/214 (7%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             ++++V+++G +    +V  I S  SG +++  V+    + +G  L+  +  +    + 
Sbjct: 72  GQVKLTVAANGTLQPTRSV-NIGSELSGTVRRVLVDVNDAVKKGQVLVELDTTKLEAQV- 129

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                   LR       +          V E        + +  L       +   + G 
Sbjct: 130 --------LRSRASVASAQARLAQAAATVKEARASLARLEEVARLSGGKVPSAAELDTGR 181

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFEKNAVS---- 212
           ++  R+L  +     S+   R  L  +++++ +A + S    + + + +   NAV+    
Sbjct: 182 AAYDRALADEAAAHASVQDARAALATDETNVTKASIRSPIDGVVLSRAVEPGNAVAASLQ 241

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              L      + +  LE+  +  +   +      
Sbjct: 242 AVTLLTLAEDLSRLRLEVSVDEADVGAVQPGQQA 275


>gi|320158514|ref|YP_004190892.1| multidrug resistance protein A [Vibrio vulnificus MO6-24/O]
 gi|319933826|gb|ADV88689.1| multidrug resistance protein A [Vibrio vulnificus MO6-24/O]
          Length = 341

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 84/259 (32%), Gaps = 24/259 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +  +      A E+++ Q ++         ++ +   +     + ++ + +   
Sbjct: 50  RAKILSVAPQVQGQVVAVEAKDFQAVNKGDLLLKIDARPYLLAVKQAKAAYQLAVQQHDV 109

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 +        R+ L+  Q +   + +L  +   S  DL+  +  +  +   L + 
Sbjct: 110 ADKQVTEAVAGLDAARSNLTEAQLEYKRIDSLVTRKLASAQDLDTAKNKLANAQASLEQA 169

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +  + +  E   EA +      +                   L   E       I 
Sbjct: 170 RASVEKAIANRGEEGAEAAVVQQAAAQ-------------------LAQAELNLSYTDIT 210

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ G      +    +     Q L  ++      ++RA      + H+K G  A V   
Sbjct: 211 SPVDGIAGEINTH-VGSVVAVGQTLFPVI-IKDSYWVRANFKETDLTHIKPGMEAEVVID 268

Query: 354 HYADIREKKFKAIIEKIDP 372
            Y D     +KA +E++ P
Sbjct: 269 MYPDR---VWKATVEELSP 284


>gi|254805646|ref|YP_003083867.1| putative efflux pump protein [Neisseria meningitidis alpha14]
 gi|254669188|emb|CBA07942.1| putative efflux pump protein [Neisseria meningitidis alpha14]
          Length = 390

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 81/261 (31%), Gaps = 27/261 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 109 NELIQAVRQNRQQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 168

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 169 AVSQAQAAVKAALAEESSARAALGGQVALRE-----------------QPAVQTAIGRLK 211

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 212 DAWLNLQRTQIRAPTDGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 269

Query: 342 VKKGYTATVRFPHYA-DIREKKF-------KAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +K G  A +    Y   I  +               + P  +   N ++  +   V + +
Sbjct: 270 MKIGQPAELVSDLYGKQIVYRGMVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVL 329

Query: 394 TDLAFSDNNIELRNGFPAEVL 414
                  + + +      +V 
Sbjct: 330 NREDVDRHPLRIGLSMTVKVD 350



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 60  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELIQAVRQNR 119

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           + +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 120 QQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 179

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 180 ALAEESSARAALGGQVALREQPAVQTAIGRLKDAWLNLQRT 220


>gi|189461671|ref|ZP_03010456.1| hypothetical protein BACCOP_02335 [Bacteroides coprocola DSM 17136]
 gi|189431643|gb|EDV00628.1| hypothetical protein BACCOP_02335 [Bacteroides coprocola DSM 17136]
          Length = 345

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 61/428 (14%), Positives = 125/428 (29%), Gaps = 101/428 (23%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF- 63
           M KN KR  P     + L       G I+W     I       G++   DN    +    
Sbjct: 1   MIKNKKRAIPNFFIALVL------AGGISW-----ICGKFIHLGDVEYTDNAQVKQHLSP 49

Query: 64  -----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
                 G IKK   E    + +G  L+          I+  +  +K  +   D       
Sbjct: 50  INTRVQGFIKKIYFEEYQSVKKGDTLVV---------IENTEYLLKVAQAEAD------- 93

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                                             +   ++          T   +IY+  
Sbjct: 94  ----------------------------------YQNALAGKSAMHTTINTTQSNIYVTE 119

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             +E +    R  L + + D      L ++ AV+    ++ +     +     + + +++
Sbjct: 120 AAIEEQ----RVRLQNAETDYKRYAELMKEEAVTPQQFDRVKTDYAATKARYEQLLRQKE 175

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           +                    +E ++ LEQN+       + L + +       I +   G
Sbjct: 176 SSEL---------------VKQEQTQRLEQNESDIKLAEAALNLAKLNLSYTVICATADG 220

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   ++       Q  Q L+ +V      ++ A     Q   +K+G    +       +
Sbjct: 221 -VTGRKNIHEGELVQSGQTLVTLV-DGTEKWVIANYKETQTTDMKQGQLVEMTVDAIPGV 278

Query: 359 REKKFKAIIEKID-------PIISQQDNNL---QTQEYYEVILKITDLAFSDNNIELRNG 408
           +    +  I  I         +I Q ++     + ++   V ++ T     +N   LR G
Sbjct: 279 KY---QGQIISISDATGSFYSLIPQDNSAGNFVKVEQRIPVRIEFTHNNSKENLSRLRAG 335

Query: 409 FPAEVLFT 416
              E    
Sbjct: 336 MNVECYVK 343


>gi|305667429|ref|YP_003863716.1| Secretion protein HlyD [Maribacter sp. HTCC2170]
 gi|88709477|gb|EAR01710.1| Secretion protein HlyD [Maribacter sp. HTCC2170]
          Length = 415

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 89/251 (35%), Gaps = 26/251 (10%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L+ + +L  A     Q+ L     L ++    +  +   +  + +  LEL+ +I+E    
Sbjct: 105 LDAQLNLESAESKYTQEQLDTTLTLKQE----RTSIKDIQFNIEEDKLELKRSIYESPVT 160

Query: 241 LRHINELYDEANLEFANYLKEIS-------RDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +R +    + A  +     ++ S         + +     +    KL  L + ++  TI 
Sbjct: 161 IRQLEIKIERAERDLKEKKEDYSIKKRKAIAKMVEVGTEVSKIRKKLDGLLELQKSFTIH 220

Query: 294 SPIAGTIVYNQSFS-----SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           S   G I Y ++         +      P +  +P       +       I+ +KK  + 
Sbjct: 221 STANGMITYMKNRDGSKRIVGSSIAPWDPTIATLPDLTKMESKTYANEVDIRKIKKDLSV 280

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           T+ F  + D+     +  +  +  +  ++  +      ++V++K+ +      N  +R G
Sbjct: 281 TIGFDAFPDV---MLEGTVTSVANVGEKKRGSDINL--FQVMVKLNE-----TNTNIRPG 330

Query: 409 FPAEVLFTAKN 419
                    + 
Sbjct: 331 MTTSNRILIEE 341


>gi|237816633|ref|ZP_04595625.1| Multidrug resistance protein A [Brucella abortus str. 2308 A]
 gi|260544310|ref|ZP_05820131.1| multidrug resistance protein A [Brucella abortus NCTC 8038]
 gi|260757060|ref|ZP_05869408.1| secretion protein HlyD family protein [Brucella abortus bv. 6 str.
           870]
 gi|260759569|ref|ZP_05871917.1| secretion protein HlyD family protein [Brucella abortus bv. 4 str.
           292]
 gi|260762813|ref|ZP_05875145.1| secretion protein HlyD family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882870|ref|ZP_05894484.1| secretion protein HlyD family protein [Brucella abortus bv. 9 str.
           C68]
 gi|297249984|ref|ZP_06933685.1| multidrug resistance protein A [Brucella abortus bv. 5 str. B3196]
 gi|237787446|gb|EEP61662.1| Multidrug resistance protein A [Brucella abortus str. 2308 A]
 gi|260097581|gb|EEW81455.1| multidrug resistance protein A [Brucella abortus NCTC 8038]
 gi|260669887|gb|EEX56827.1| secretion protein HlyD family protein [Brucella abortus bv. 4 str.
           292]
 gi|260673234|gb|EEX60055.1| secretion protein HlyD family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677168|gb|EEX63989.1| secretion protein HlyD family protein [Brucella abortus bv. 6 str.
           870]
 gi|260872398|gb|EEX79467.1| secretion protein HlyD family protein [Brucella abortus bv. 9 str.
           C68]
 gi|297173853|gb|EFH33217.1| multidrug resistance protein A [Brucella abortus bv. 5 str. B3196]
          Length = 321

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 60/202 (29%), Gaps = 18/202 (8%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEIS---RDLEQNQRTFADEMSKLTILEKTRE 288
           ENI    N            + + A+    IS       +   +            +   
Sbjct: 121 ENIPVAANQQVKAGARLAGVDAQIASAKANISVLEAQYNEAASSTKSLELARDKAARDLS 180

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             ++ +P  G I  N S    +     Q +  +VP     YI A     Q+ H+K G TA
Sbjct: 181 FTSLRAPFDGVI-GNLSGKKGDLVAPGQKIAALVPVD-QLYIDANFKETQLAHIKVGETA 238

Query: 349 TVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSD 400
            +        +   F   +  I P           +      T+    V ++IT    + 
Sbjct: 239 HIYVDAIDGTK---FDGKVASIAPASGAVFSLLPPENATGNFTKVVQRVPVRITIPKEAF 295

Query: 401 NNIELRNGFPAEVLFTAKNTTL 422
            + ++R G    V       T 
Sbjct: 296 ESGKIRAGLSVIVDVDT--RTA 315


>gi|260463592|ref|ZP_05811791.1| secretion protein HlyD family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259030683|gb|EEW31960.1| secretion protein HlyD family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 403

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 74/263 (28%), Gaps = 21/263 (7%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
               T  + +        V +       + LL      +    K  + G+++    +   
Sbjct: 108 ARTVTIGAEISGRVTDVAVTDNQPVKAGDILLRIDDADYQANLKQADAGVAAAQAEIADV 167

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             ++ +        + + +  +A L   + +    + L  K   +Q    Q    + +  
Sbjct: 168 KAQIEAQNAKIDAAQKQVAQAQAALDFAKAEDQRNRELLAKGTATQQQAQQAASTLRQDQ 227

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             L             I  L  +                   +       +       T 
Sbjct: 228 AALDSAQANAAAAKSQIVVLQAQGKS---------------AEAKLNQAKASQDQAHTTL 272

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +  I +P+AG            YAQ  Q LM  VP     +++A     Q+  ++ G  
Sbjct: 273 SRTAITAPVAGHATSISV-GQGTYAQPGQVLMMFVP--DEVWVKANFKETQLDLMRPGQP 329

Query: 348 ATVRFPHYADIREKKFKAIIEKI 370
             +    Y    EK F   ++ I
Sbjct: 330 VDIDIDAYP---EKSFHGRVDSI 349



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 7/169 (4%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           +   V I +  SG +    V +   +  G  LL  +D +    +      +   +  I  
Sbjct: 107 DARTVTIGAEISGRVTDVAVTDNQPVKAGDILLRIDDADYQANLKQADAGVAAAQAEIAD 166

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS------LKM 166
            K+ ++  N K D  +K     +  L DF         ++   G ++  ++      L+ 
Sbjct: 167 VKAQIEAQNAKIDAAQKQVAQAQAAL-DFAKAEDQRNRELLAKGTATQQQAQQAASTLRQ 225

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
               + S   N    +++  +L+A   S +  L   K   ++   + + 
Sbjct: 226 DQAALDSAQANAAAAKSQIVVLQAQGKSAEAKLNQAKASQDQAHTTLSR 274


>gi|258623086|ref|ZP_05718099.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258584699|gb|EEW09435.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 365

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 63/183 (34%), Gaps = 20/183 (10%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLE--QNQRTFADEMSKLTILEKTREQKTI 292
            + +     +     E N   A   K +  ++          D  S L+ +++      +
Sbjct: 120 AQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLANTQV 179

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +         ++     P+  I+       I A V+ + IQHV+ G +A +RF
Sbjct: 180 RAPFDGLVETLPI-EKGDFVGIGDPVASII-DLHKLVIEADVSERHIQHVQLGQSARIRF 237

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                I     +  +  I  + S   N       + + +++ +   +     +  G  AE
Sbjct: 238 -----IDGSDTQGKVRYISRLSSPATNT------FAIEVEVDNPQQA-----IPAGVSAE 281

Query: 413 VLF 415
           V  
Sbjct: 282 VEL 284



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 61/200 (30%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I   ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIELYGRTAPDRQAK-IGAEIAGRIIDIKIVKGQAVKKDQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 127 AQLKVRQ----QEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLANTQVRAP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  L   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 183 FDGLVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLGQSA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGSDTQGKVRYISRL 253


>gi|239905455|ref|YP_002952194.1| secretion protein HlyD family protein [Desulfovibrio magneticus
           RS-1]
 gi|239795319|dbj|BAH74308.1| secretion protein HlyD family protein [Desulfovibrio magneticus
           RS-1]
          Length = 371

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 56/380 (14%), Positives = 113/380 (29%), Gaps = 88/380 (23%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V++ G++      + +    +G + +   E G ++ QG  L                   
Sbjct: 61  VAAPGKVEPVSEEMRLGFDIAGKLAEVSAEEGDRVRQGQILAKL---------------- 104

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                       A D    + DV E+   +RE  L   L             G   + R 
Sbjct: 105 ------------AADEYAARIDVAEQVLAAREAALAKVLA------------GSRDMERK 140

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                         +  LEN+                  + L  K  +SQ + ++ ER  
Sbjct: 141 EARAAVEEARAVSEQAKLENERR----------------RRLLSKEVLSQEEADRAEREF 184

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                         K   + ++      +L      +E   D+++     A+  S+L   
Sbjct: 185 --------------KVAGQRLDAARQRFHLVDDPSREE---DVKKAMAEAAEARSRLAEA 227

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +    +  I SPI G ++     +    +      +  V       +RA V  + I  + 
Sbjct: 228 QALAAKTVIRSPIDGVVLRKHRRAGEMVSVSFDTPVVTVGDVSRLRVRADVDERDIARIA 287

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPII------SQQDNNLQTQEYYEVILKITDLA 397
            G  A +    Y D   K+F  ++ ++  I+      + +          E ++ +T  A
Sbjct: 288 PGQKAMLMAEAYGD---KRFSGVVIRVAGILGKKNIRTDEPAEKNDTRILETLIDVTPPA 344

Query: 398 FSDNNIELRNGFPAEVLFTA 417
                + +      +V    
Sbjct: 345 ELPVGLRM------DVFIIT 358


>gi|194333960|ref|YP_002015820.1| RND family efflux transporter MFP subunit [Prosthecochloris
           aestuarii DSM 271]
 gi|194311778|gb|ACF46173.1| efflux transporter, RND family, MFP subunit [Prosthecochloris
           aestuarii DSM 271]
          Length = 321

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 65/196 (33%), Gaps = 18/196 (9%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           ++ L+++ +I  +   +            + A         L    R   D   +    E
Sbjct: 59  RNRLKIQSSIAGRVEEILVSEGDMVNQGEQLALVSSTERAALLDAAR-LQDPGEQ-AYWE 116

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           +  ++  ILSPI   I+  +S         S  L  +   S    ++A V    I  +  
Sbjct: 117 RVYKKTVILSPIDAQII-VRSIEPGQTVTTSDSLFVL---SDRLIVKAYVDETDIGRIAI 172

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G  A +    Y DIR       +E ID     + N      YY   + I      D    
Sbjct: 173 GQKADISLDAYPDIR---VGGTVEHIDYESHLESN---VNIYY---VDIIPETIPD---V 220

Query: 405 LRNGFPAEVLFTAKNT 420
            R+G  A++  T +  
Sbjct: 221 FRSGMSADIGITVQEK 236



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 1/78 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +I   I+ +VS++G +    N ++I+S  +G +++  V  G  + QG  L      E   
Sbjct: 41  AITGTIDETVSTTGVVEP-RNRLKIQSSIAGRVEEILVSEGDMVNQGEQLALVSSTERAA 99

Query: 95  LIDLKKVSIKNLRCHIDT 112
           L+D  ++     + + + 
Sbjct: 100 LLDAARLQDPGEQAYWER 117


>gi|300691717|ref|YP_003752712.1| multidrug resistance protein A [Ralstonia solanacearum PSI07]
 gi|299078777|emb|CBJ51437.1| Multidrug resistance protein A [Ralstonia solanacearum PSI07]
          Length = 426

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/295 (11%), Positives = 89/295 (30%), Gaps = 28/295 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + QL+                 +     +L   + ++R++Y N     +  ++  
Sbjct: 83  AIRADDTQLVTAGQPLIELDRADARVALEQAEAALAQAVRQVRTLYSNTGAYTSTLAMRE 142

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L+  ++DL   K +    AVSQ ++   +  +  +   +     + +       +   
Sbjct: 143 SDLAKAKEDLARRKQIAGTGAVSQEEIAHAQTSLQAAEAAVETAKEQLQANRVLTEQTTL 202

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +        ++                          + ++ + + G +   +S    
Sbjct: 203 ERHPNVLQAAAKVRE------------------AYLAYARTSLPASVTGYVAK-RSVQVG 243

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--------K 361
                  PLM IVP     ++ A     Q++H++ G    +    Y              
Sbjct: 244 QRVAPGTPLMAIVPLD-QLWVDANFKEVQVRHMRVGQPVELVADVYGSSVTYHGKVVGFS 302

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                   + P  +   N ++  +   V + +      D+ + +     A V   
Sbjct: 303 AGTGSAFSLLPAQNATGNWIKVVQRLPVRVLLDPKELKDHPLRVGLSMEARVDIH 357



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 63/182 (34%), Gaps = 10/182 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + NVV++    +G +   + ++   +  G PL+  +  +    ++  + ++      + 
Sbjct: 66  VQGNVVQVTPQVAGTVVAIRADDTQLVTAGQPLIELDRADARVALEQAEAALAQAVRQVR 125

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           T  S      +   + E      +E L     +    +   +   +  +S+  +     T
Sbjct: 126 TLYSNTGAYTSTLAMRESDLAKAKEDLARRKQIAGTGAVSQEEIAHAQTSLQAAEAAVET 185

Query: 170 RMRSIYLNRL-----DLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
               +  NR+      LE   ++L+A     +  L   +          V++  +   +R
Sbjct: 186 AKEQLQANRVLTEQTTLERHPNVLQAAAKVREAYLAYARTSLPASVTGYVAKRSVQVGQR 245

Query: 222 IV 223
           + 
Sbjct: 246 VA 247


>gi|285018773|ref|YP_003376484.1| multidrug resistance protein [Xanthomonas albilineans GPE PC73]
 gi|283473991|emb|CBA16492.1| probable multidrug resistance protein [Xanthomonas albilineans]
          Length = 393

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 81/271 (29%), Gaps = 32/271 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y +    + + S  + +L   + D+     L    A+S 
Sbjct: 95  EVALQQAEANLARTVRQVRGLYRSVDGAQAELSAQQVILQRARADVARRTGLVANGAISA 154

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      +  +   +  +          I+                        Q   
Sbjct: 155 EELAHARDQLAAAEAAVSGSRETLARSSALIDTTGI------------------DQQPDV 196

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +++        +  IL+P++G +   +S       Q    LM +VP +   ++ A 
Sbjct: 197 QAAAAQMRQAFLNNARTAILAPVSGYVAR-RSAQVGQRVQPGTTLMAVVPLN-QVWVDAN 254

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQ---- 384
               Q++H++ G    +    Y       +   ++ +              N        
Sbjct: 255 FKETQLKHMRLGQPVDMESDVYGSAV--VYHGTVQSLGIGTGSAFSLLPSQNASGNWIKI 312

Query: 385 -EYYEVILKITDLAFSDNNIELRNGFPAEVL 414
            +   V + I     +++ + +      EV 
Sbjct: 313 VQRVPVRIAIDAKQLAEHPLRIGLSMKTEVD 343



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 9/150 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + N+V+I    +G + +   ++G ++ +G PL+T +  +T       +V+++    ++ 
Sbjct: 54  VQGNLVQITPMVAGTVVRIDADDGMRVERGQPLVTLDPADT-------EVALQQAEANLA 106

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY--RSLKMKLT 169
                +  L    D  +    +++  L             V N  IS+     +      
Sbjct: 107 RTVRQVRGLYRSVDGAQAELSAQQVILQRARADVARRTGLVANGAISAEELAHARDQLAA 166

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
              ++  +R  L   S+L+       Q D+
Sbjct: 167 AEAAVSGSRETLARSSALIDTTGIDQQPDV 196


>gi|300774985|ref|ZP_07084848.1| cation eflux system protein [Chryseobacterium gleum ATCC 35910]
 gi|300506800|gb|EFK37935.1| cation eflux system protein [Chryseobacterium gleum ATCC 35910]
          Length = 371

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 67/204 (32%), Gaps = 18/204 (8%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +   T  L+  +   K  L  +  +Y +      + L+E   ++   Q   +     + 
Sbjct: 111 EMQDDTQTLQAQLAVAKRKLSSVEAMYKDDIASQKD-LQEARSEVAILQSNISKTQKNMQ 169

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +         I +P  G ++                L  I  +    ++ A V    ++H
Sbjct: 170 LYSAGGNTIQIKAPADGYVISKNISKGMPVTTGGDQLFTIS-NLDKVWVMANVYATNMRH 228

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           V       V+   Y D     F   I+ I  + ++ +            +    +   +N
Sbjct: 229 VYVNQPVVVKTLAYPDD---SFSGKIDNISQVFNENE-----------RVLKAKIIMDNN 274

Query: 402 NIELRNGFPAEVL--FTAKNTTLA 423
            ++LR G  A+V+    ++N +  
Sbjct: 275 GMKLRPGMSADVVLPINSQNKSAL 298



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 46/119 (38%), Gaps = 2/119 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           + +LPIE S++ +GE+ +  +      S   G++       G  + +G  L + +     
Sbjct: 51  AEMLPIEESITLTGEVESNSDKTVPFVSLVDGVVMDTYFSLGDYVKKGQTLASVKSTAVN 110

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           ++ D  + +++        + S+++ +       +K  +    ++         T   +
Sbjct: 111 EMQDDTQ-TLQAQLAVAKRKLSSVEAMYKDDIASQKDLQEARSEVAILQSNISKTQKNM 168


>gi|49083247|gb|AAT50982.1| PA3304 [synthetic construct]
          Length = 286

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 76/224 (33%), Gaps = 30/224 (13%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF------ANYLKEISRDLEQN 269
           L + ++  Y++ LE    + E ++    + +               A   +    +    
Sbjct: 71  LMRIDQERYQANLEQARAVAETRHQQYLLRQNEAARRSRLGIGAISAEDKENAQINAAIA 130

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +  + + ++++ I E   ++  + +   G +   +  +  NYA   Q +M +V   +  Y
Sbjct: 131 RSEYQEAVAQVKIAELNLKRSELRAARNGQVTNLRL-AQGNYATAGQAVMALV-DQQSFY 188

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----- 384
           + A     ++  ++ G  A VR               +E I   I+ +++    Q     
Sbjct: 189 VVAYFEETKLPGIRVGMRAQVRLMSGDQ----PIDGTVESISSGITDRNSTPDGQLLANV 244

Query: 385 ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                     +   V +++  +     ++ L  G  A V     
Sbjct: 245 EPTFNWVRLAQRIPVRIRLDQV---PADVHLSAGMTASVTVQGD 285



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 54/185 (29%), Gaps = 8/185 (4%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN------LRCHIDTEKSAL 117
           SG +   +V++   +  G  L+  +       ++  +   +       LR +    +S L
Sbjct: 51  SGWVTDLEVKDNQVVKVGDVLMRIDQERYQANLEQARAVAETRHQQYLLRQNEAARRSRL 110

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                  +  E A  +      ++            N   S +  +   ++T +R    N
Sbjct: 111 GIGAISAEDKENAQINAAIARSEYQEAVAQVKIAELNLKRSELRAARNGQVTNLRLAQGN 170

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNL--FEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                     L    S +         L        +Q  L   ++ +  +   +   I 
Sbjct: 171 YATAGQAVMALVDQQSFYVVAYFEETKLPGIRVGMRAQVRLMSGDQPIDGTVESISSGIT 230

Query: 236 EQKNM 240
           ++ + 
Sbjct: 231 DRNST 235


>gi|311696152|gb|ADP99025.1| efflux transporter, RND family, MFP subunit [marine bacterium HP15]
          Length = 366

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 72/220 (32%), Gaps = 24/220 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            D+ +Q  ++ +    + E     +     + E   +   +            ++ +  F
Sbjct: 89  GDVVKQGDVLIRIDAAIDEAALRTRRAEAQLAEQEFKRVSDLLPKRAVSQSQYDEAKANF 148

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +++   E    +K I +P  GT +  +      Y     P+++I       Y+   
Sbjct: 149 DAARARVNEAEAQLSKKIIRAPFDGT-LGIRMVDQGEYIATGTPIVEIN-MLDPIYVDYT 206

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           ++ K + +V  GY           + E+ F+  +  I+  ++ +           V ++ 
Sbjct: 207 LSEKNLPNVATGYPVVATVAA---VPEQDFEGSVSAINTSVNPETRT--------VRVRA 255

Query: 394 TDLAFSDNNIELRNGFPAEVL--------FTAKNTTLAQE 425
           T    S+ +  LR G  A VL              T    
Sbjct: 256 T---LSNPDNLLRPGMFATVLTQQPEDNEVVTVPRTAISY 292



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/118 (12%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           ++ + G +   + +  + +   G+I+    E+G  + QG  L+  +       ID   + 
Sbjct: 58  AIKAVGSVEAINGIR-VANEVPGVIEAINFESGDVVKQGDVLIRID-----AAIDEAALR 111

Query: 103 IKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            +     + + E   +  L  K  V +  ++  +        + +   +++    I +
Sbjct: 112 TRRAEAQLAEQEFKRVSDLLPKRAVSQSQYDEAKANFDAARARVNEAEAQLSKKIIRA 169


>gi|212712158|ref|ZP_03320286.1| hypothetical protein PROVALCAL_03240 [Providencia alcalifaciens DSM
           30120]
 gi|212685205|gb|EEB44733.1| hypothetical protein PROVALCAL_03240 [Providencia alcalifaciens DSM
           30120]
          Length = 330

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 94/292 (32%), Gaps = 34/292 (11%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +  E  + +    LGK               +  S K +L      Y  +   + ++ + 
Sbjct: 59  EVDEGAQVKAGQLLGKLDDAPYINALNKAKGLRDSAKAQLALKEKGYRTQEIAQVEAEVA 118

Query: 189 RALLSSHQKD--LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           +   +    D      + L  +  +S NDL+  +              + +   L  +  
Sbjct: 119 QRQAAWQYADNFYKRQQGLAAQKLISANDLDNAK--------------NNRNQTLAALKA 164

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             D+ N   + + +E   ++   +  +    + +   E       +L+P  GT++  ++ 
Sbjct: 165 SQDKLNQYQSGFRQE---EIAAARGEWLQAEAAVAQAELDLADTQLLAPSDGTVLT-RAI 220

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      +  +   +   ++RA V+   +     G    + F          +   
Sbjct: 221 EPGTIIGSGNTVFSVT-LTHPVWVRAYVSEAHLGDAVPGSKV-LLFT--DSQPNTPYHGT 276

Query: 367 IEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           I  + P       S Q  +L+T   Y + + + D      N +LR G P  V
Sbjct: 277 IGFVSPTAEFTPKSVQTPDLRTDLVYRLRIIVDDP-----NDKLRQGMPVTV 323



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 42/134 (31%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +   +V+ G+Q+  G  L   +D    + ++  K    + +  +  ++         
Sbjct: 52  GGKLASLEVDEGAQVKAGQLLGKLDDAPYINALNKAKGLRDSAKAQLALKEKGYRTQEIA 111

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               E A      Q  D   K     +       + +  +   +   + ++  ++  L  
Sbjct: 112 QVEAEVAQRQAAWQYADNFYKRQQGLAAQKLISANDLDNAKNNRNQTLAALKASQDKLNQ 171

Query: 184 KSSLLRALLSSHQK 197
             S  R    +  +
Sbjct: 172 YQSGFRQEEIAAAR 185


>gi|83858617|ref|ZP_00952139.1| HlyD family secretion protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853440|gb|EAP91292.1| HlyD family secretion protein [Oceanicaulis alexandrii HTCC2633]
          Length = 372

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 70/218 (32%), Gaps = 31/218 (14%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            E+  +   +L   E        E R  + E +  +  I +L D                
Sbjct: 90  VEEGDI-LVELLDTEE--AAGLNEARATLRETQRDISRIQDLTDRGVAS--------RTR 138

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L++ Q  +    +++  +E     + I +P +G I   ++ S          + ++    
Sbjct: 139 LDEAQAAYDRARARVEAIEARMADRIIRAPFSGVI-GLRNVSVGELVGPGDVIAQL---D 194

Query: 326 KLTYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             + I+    V  + +  +++G T   R   + D     F   ++++D  I      +  
Sbjct: 195 DTSVIKLDFTVPERFLSVIERGQTVRARSSAFPDQ---VFAGQVDQVDSRIDPATRTVT- 250

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                V   I + A       LR G    V       T
Sbjct: 251 -----VRALIDNEA-----GRLRPGMLMTVELRRDERT 278



 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 36/89 (40%), Gaps = 10/89 (11%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN----------LRCHIDTEKS 115
           II +   ++G+++ +G  L+   D E    ++  + +++           L       ++
Sbjct: 78  IIARLDFDSGARVEEGDILVELLDTEEAAGLNEARATLRETQRDISRIQDLTDRGVASRT 137

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            LD     YD      E+ E ++ D + +
Sbjct: 138 RLDEAQAAYDRARARVEAIEARMADRIIR 166


>gi|158320234|ref|YP_001512741.1| RND family efflux transporter MFP subunit [Alkaliphilus oremlandii
           OhILAs]
 gi|158140433|gb|ABW18745.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
           oremlandii OhILAs]
          Length = 412

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 109/347 (31%), Gaps = 90/347 (25%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           IKK  V+ G  + +G  L   +D      ID  K  ++     I+ EK      + + + 
Sbjct: 73  IKKLYVKEGDFVKKGDVLFVLDDSNNAASIDQAKAGVE--IAKINYEKMGTTAKDQQLEQ 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +  A ES          K     +K     +  ++ +  +    +          +    
Sbjct: 131 VTNAIES---------AKLGFKEAKTNLDRMKELFDTGGISAQSLEQA-------QKAYD 174

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +  L S Q++  + +   E+N      +   +  ++++   L     + +N+     E
Sbjct: 175 GAKLQLESAQRNYAIAEKTVEQN------ILTAKEQLHQAEASLAAARKQVENL-----E 223

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  E N E +    E  + L                              AGT       
Sbjct: 224 VTAEINGEVSEIYVEEDKTLA-----------------------------AGT------- 247

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      +M IV +     ++ KV    +  + +G   TV          K    I
Sbjct: 248 ----------KIMDIV-NYDDLEVKIKVDEFDLNAITEGKEVTVTINPLD----KDVTGI 292

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           + K+     +Q  N+    ++   + +      + + +LR G  AEV
Sbjct: 293 VSKVS----KQALNVNGVSFFTASIDL------EKDKDLRVGLSAEV 329


>gi|117925467|ref|YP_866084.1| GAF domain-containing protein [Magnetococcus sp. MC-1]
 gi|117609223|gb|ABK44678.1| GAF domain protein [Magnetococcus sp. MC-1]
          Length = 611

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 69/216 (31%), Gaps = 25/216 (11%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             V + +L        +  LEL    ++Q   L+   +   + N        ++   L Q
Sbjct: 399 QYVQEGELLAT-LDDREIALELSRWENQQIQFLKQAQDAQAQHNS------AQVRIALSQ 451

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKL 327
            ++  A       + ++   +  + +P AG +V  + S    +  Q+ + L ++ P +  
Sbjct: 452 AKQAAAQR----DLAQEKLRRAQLTAPFAGLVVRGDLSQRLGSAVQKGEMLFELAPLASY 507

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +  +V    I  V+ G    +      + R       I  I P+        +    +
Sbjct: 508 RVV-LQVEEADIAQVESGQQGELILTALPNDRFPI---KINLITPVAVADQGTNR----F 559

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            V     +    D    +R G         +   L 
Sbjct: 560 RV-----EAELLDGVALVRPGMEGVGKIEIEERRLL 590



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/191 (9%), Positives = 53/191 (27%), Gaps = 11/191 (5%)

Query: 23  LSIIGIIGLITWSILLPIEIS---VSSSGEILNEDNVV-------EIKSPFSGIIKKFQV 72
           L   G +GL  W  +  +        ++G      +          + +PF G +    V
Sbjct: 337 LLGAGYVGLKLW-FIALLATGLFFTLATGMFRVAADAKLEGAVQRVVAAPFDGFVATASV 395

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  + +G  L T +D E    +   +             ++  +    +  + +    
Sbjct: 396 RAGQYVQEGELLATLDDREIALELSRWENQQIQFLKQAQDAQAQHNSAQVRIALSQAKQA 455

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           + +  L     +     +      +            +   +      L +   +L+   
Sbjct: 456 AAQRDLAQEKLRRAQLTAPFAGLVVRGDLSQRLGSAVQKGEMLFELAPLASYRVVLQVEE 515

Query: 193 SSHQKDLTMMK 203
           +   +  +  +
Sbjct: 516 ADIAQVESGQQ 526


>gi|330825305|ref|YP_004388608.1| RND family efflux transporter MFP subunit [Alicycliphilus
           denitrificans K601]
 gi|329310677|gb|AEB85092.1| efflux transporter, RND family, MFP subunit [Alicycliphilus
           denitrificans K601]
          Length = 537

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 100/301 (33%), Gaps = 41/301 (13%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             +E  +E+      +   +  K+   G+ +   SL+     +R+      D E ++  +
Sbjct: 82  AVYEGEQEEAETNSNQIRISTEKIQKLGVRTEAVSLRSLDKVVRAAGRIEPD-ERQTFTI 140

Query: 189 RALLSSHQKDLTMM---------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            A    + + L            + LFE   V   +L   +R    +   +         
Sbjct: 141 AAKFEGYVERLHANVTGQAVSKGQPLFE---VYSPELVSAQREYAIAAQGVDALKDASGE 197

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
             R + EL D +     N+      D+   Q         L      R   T  SP+AG 
Sbjct: 198 TQRGMRELADSSLARLRNW------DISDEQVKT------LAKSGDARRTLTFRSPVAGI 245

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I   ++          + L ++   S +  I A V  + I  VK G  A V+   Y D  
Sbjct: 246 ITDKKAI-QGMRFMPGEMLYQVANLSSVWVI-ADVFEQDIGLVKSGGKAKVQINAYPD-- 301

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            K F+  +  + P +  +           V +++     S+    L+ G  A+V     +
Sbjct: 302 -KVFQGTVSYVYPTLKPETRT--------VQVRVD---LSNTGGLLKPGMFAQVELPTAS 349

Query: 420 T 420
            
Sbjct: 350 K 350



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 63/184 (34%), Gaps = 10/184 (5%)

Query: 40  IEISVSSSGEILNE-DNVVEIKSPFSGIIKKFQVE-NGSQILQGTPLLTF---EDIETTD 94
           ++  V ++G I  +      I + F G +++      G  + +G PL      E +    
Sbjct: 120 LDKVVRAAGRIEPDERQTFTIAAKFEGYVERLHANVTGQAVSKGQPLFEVYSPELVSAQR 179

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
              +    +  L+      +  +  L +      + ++  +EQ+        +  +  F 
Sbjct: 180 EYAIAAQGVDALKDASGETQRGMRELADSSLARLRNWDISDEQVKTLAKSGDARRTLTFR 239

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             ++ +    K  +  MR +    L      S +  +    ++D+     L +    ++ 
Sbjct: 240 SPVAGIITD-KKAIQGMRFMPGEMLYQVANLSSVWVIADVFEQDIG----LVKSGGKAKV 294

Query: 215 DLNQ 218
            +N 
Sbjct: 295 QINA 298


>gi|319641938|ref|ZP_07996607.1| hypothetical protein HMPREF9011_02206 [Bacteroides sp. 3_1_40A]
 gi|317386436|gb|EFV67346.1| hypothetical protein HMPREF9011_02206 [Bacteroides sp. 3_1_40A]
          Length = 328

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 54/188 (28%), Gaps = 23/188 (12%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            ++ + +  K   +   + Y+    E             + Q       S   I  K   
Sbjct: 80  SMQSSYNAAKAAFKRTEDTYNRMK-ELHEKGSLPEIKWVEVQSLLEQARSMQEIAAKNLY 138

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              + +P +G I                P++++V  +    ++  V   +I  V  G  A
Sbjct: 139 DCKLYAPYSGVISEKNI-EVGQNVMPGMPVVQLV-TASQLKVKIAVPETEITSVSVGQDA 196

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY---YEVILKITDLAFSDNNIEL 405
            ++ P       K     +          +  +    +   Y+V L + D         L
Sbjct: 197 KIQVPALGR---KVLTGTV---------DEKGIMANPFSRSYDVKLNVKDTDSG-----L 239

Query: 406 RNGFPAEV 413
             G   EV
Sbjct: 240 MPGMVVEV 247



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 19/44 (43%)

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           P SG ++  +V  G +++ G  + T +        +  K + K 
Sbjct: 51  PVSGTVRTLKVHLGQRVVFGQLIATLDPTSMQSSYNAAKAAFKR 94


>gi|304386498|ref|ZP_07368786.1| multidrug resistance protein A [Neisseria meningitidis ATCC 13091]
 gi|304339327|gb|EFM05399.1| multidrug resistance protein A [Neisseria meningitidis ATCC 13091]
          Length = 418

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 137 NELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 196

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 197 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 239

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 240 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 297

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 298 MKIGQPAEL 306



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 88  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELIQAVRQNR 147

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 148 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 207

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 208 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRT 248


>gi|329122106|ref|ZP_08250714.1| efflux transporter, RND family, MFP subunit [Dialister
           micraerophilus DSM 19965]
 gi|327466913|gb|EGF12429.1| efflux transporter, RND family, MFP subunit [Dialister
           micraerophilus DSM 19965]
          Length = 372

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 66/218 (30%), Gaps = 21/218 (9%)

Query: 207 EKNAVSQNDLNQQ--ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           + + V++  +      R +  +  + +  +  +++    + +LYDE  +          +
Sbjct: 91  QNDYVTKGQVLATVFSRGIGDAFHQAQNTLINKESYYNRMQKLYDENAISL--------Q 142

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS---FSSSNYAQQSQPLMKI 321
            LE  +  + +  +     +   ++  I++PI G ++        + S        +M I
Sbjct: 143 ALENAKLDYLNSKALYEKAKTDMDETEIVAPIDGYVIGEPMKEGTTLSQGLSSQMVIMTI 202

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                   I   V    I  VK G         Y     K F   +  I     Q+    
Sbjct: 203 A-DFSSMRIELLVDETDIGLVKIGQYVEFTVDAYP---GKIFHGKVSDISRKEKQKTGAA 258

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               +Y V + + D         L     A        
Sbjct: 259 AAVVHYTVYVDVDDNDKDG----LYPSMTARASIRGNE 292



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 17/126 (13%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVS----------------SSGEILNEDNVVEIKSPFS 64
            ++ I+ +I  + W      +  V                 ++G I    N V++ +  S
Sbjct: 23  IVVVIVSLIFFVYWKFFTQHDKKVEYVLGNVTRGDIVSTIDATGTIQPV-NRVDLSTVLS 81

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++K  V+    + +G  L T       D     + ++ N   + +  +   D      
Sbjct: 82  GTLEKVMVKQNDYVTKGQVLATVFSRGIGDAFHQAQNTLINKESYYNRMQKLYDENAISL 141

Query: 125 DVLEKA 130
             LE A
Sbjct: 142 QALENA 147


>gi|326791747|ref|YP_004309568.1| hypothetical protein Clole_2669 [Clostridium lentocellum DSM 5427]
 gi|326542511|gb|ADZ84370.1| hypothetical protein Clole_2669 [Clostridium lentocellum DSM 5427]
          Length = 386

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/333 (14%), Positives = 121/333 (36%), Gaps = 36/333 (10%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+   ++ G  + +GT L+T +     + +  K+  I+ L+   +   ++LD  +   + 
Sbjct: 69  IETIDLKAGDLVEKGTQLMTLDYESYKNEMIKKEQEIQLLKVEREAAYNSLDPQSVTINQ 128

Query: 127 LEKAFESREEQL---LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                ++++ QL    D          K+ +  IS   +  ++  + +    ++  +L++
Sbjct: 129 KNSELKTKQNQLSNGTDPELIKIEEQIKILDQQISIAEKDYEVSKSLIEVGGISDKELKD 188

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K   L  L ++  +    +K L       Q +++  +  +    L +     E+ + +  
Sbjct: 189 KEMSLAELKNNKYQAENALKQLTTSK---QLEVDSLKGSIDSLQLTVSNTSTEKASKVET 245

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++     A  E      ++++   +++    D+                     G +   
Sbjct: 246 LDIKIQTAETELKEMKAKLTKAYLKDKAIVLDQKE-------------------GVVYEI 286

Query: 304 QSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
              +     +  +P+M+++ P      +   V    I  +K G  A +      D     
Sbjct: 287 LV-TEGTRLKGGEPIMRLIDPSKLTALVD--VPEAFINKIKVGEKADLYLAASPD----- 338

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
             AI  K+  I +Q    +  +    V L++T+
Sbjct: 339 -DAISAKVSRI-AQAAKVVNGENMISVELEVTE 369



 Score = 36.9 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 42/100 (42%), Gaps = 5/100 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTF-EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           G++ +  V  G+++  G P++   +  + T L+D+ +  I  ++     EK+ L    + 
Sbjct: 281 GVVYEILVTEGTRLKGGEPIMRLIDPSKLTALVDVPEAFINKIKV---GEKADLYLAASP 337

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            D +  A  SR  Q    +   +    ++      +V + 
Sbjct: 338 DDAI-SAKVSRIAQAAKVVNGENMISVELEVTENQAVLKQ 376


>gi|261401649|ref|ZP_05987774.1| multidrug resistance protein A [Neisseria lactamica ATCC 23970]
 gi|269208290|gb|EEZ74745.1| multidrug resistance protein A [Neisseria lactamica ATCC 23970]
          Length = 390

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 109 NELVQAVRQNRRQNAATSQAAAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 168

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 169 AVSQAQAAVKAALAEESSARAALGGQVALRE-----------------QPEVQTAIGRLK 211

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 212 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 269

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 270 MKIGQPAEL 278



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 60  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 119

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++A      + D+     + R    L   G   +     ++       +  ++
Sbjct: 120 RQNAATSQAAAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 179

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  +  +  A+       L + + 
Sbjct: 180 ALAEESSARAALGGQVALREQPEVQTAIGRLKDAWLNLQRT 220


>gi|24372409|ref|NP_716451.1| HlyD family secretion protein [Shewanella oneidensis MR-1]
 gi|24346375|gb|AAN53896.1|AE015526_7 HlyD family secretion protein [Shewanella oneidensis MR-1]
          Length = 405

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 89/273 (32%), Gaps = 26/273 (9%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +S   S+  +++         L  E K   L A + S  +   +   L      S  ++
Sbjct: 57  QASKLVSVGAQVSGQILSLSVALGEEVKKGDLIAQIDSLAQQNNLQNALA-----SLKNI 111

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFAD 275
           N Q R       + +     Q+ ML   ++    A+ E A     +   +LEQ +     
Sbjct: 112 NAQYRAKQAQIRQAKLEYTRQQQMLA--DKASSRADFEAAEATLTVYQAELEQLEAQKQQ 169

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAK 333
               +           I +P+ GT+VY+           +Q    IV         ++A+
Sbjct: 170 AEINVDSARIDLGYTKITAPMDGTVVYSAV-EVGQTVNANQTTPTIVEMAQLDTMTVKAQ 228

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-------IISQQDNNLQTQEY 386
           ++   I +V+ G      F          ++  +  I+P         S   ++     Y
Sbjct: 229 ISEADIVNVRPGQPVY--FTILGRPNHP-YRGSLRAIEPGPTSMDGDDSNMSSSDSDAIY 285

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           Y  +  +      + +  LR G  A++      
Sbjct: 286 YHGLFDV-----ENPDRTLRIGMTAQISIVLAK 313



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 51/137 (37%), Gaps = 3/137 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G +     +V + +  SG I    V  G ++ +G  +   + +   + +   
Sbjct: 46  IENSVLANGMLQAS-KLVSVGAQVSGQILSLSVALGEEVKKGDLIAQIDSLAQQNNLQNA 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             S+KN+      +++ +     +Y   ++    +     DF     +    V+   +  
Sbjct: 105 LASLKNINAQYRAKQAQIRQAKLEYTRQQQMLADKASSRADFEAAEATLT--VYQAELEQ 162

Query: 160 VYRSLKMKLTRMRSIYL 176
           +    +     + S  +
Sbjct: 163 LEAQKQQAEINVDSARI 179


>gi|54295761|ref|YP_128176.1| hypothetical protein lpl2851 [Legionella pneumophila str. Lens]
 gi|53755593|emb|CAH17095.1| hypothetical protein lpl2851 [Legionella pneumophila str. Lens]
          Length = 381

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 77/239 (32%), Gaps = 31/239 (12%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +   S  +      + L+    +S+N+   ++  +  + + L +   +   ML  +++  
Sbjct: 107 KDSYSIAKAKFVGTEELWNAGLISKNNYLSEKSGLDTARVTLMQATRKLSEMLEKMDDKN 166

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY------ 302
            +     +                 AD      IL        + +P  G ++Y      
Sbjct: 167 TQNISNLS----------------LADFDKVRKILTSNHNLIHLKAPSDGIMLYPPKSGE 210

Query: 303 --NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
             N   +  +  +  Q +  I    K   +   V    I  ++ G  AT+    +   + 
Sbjct: 211 DKNNRVTVGSTIKSGQVIALIG-DLKGISVEIDVPEIDIDKIRPGMEATISGVAFGRHQ- 268

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              K  +  ++   S  + +      +  ++++  L     +  ++ G  A +    ++
Sbjct: 269 --LKGKLVAVNAQAS--NTSTGGLPSFTAVVEVNSLTPEQQSW-IKVGMSASIELNVES 322


>gi|88799589|ref|ZP_01115165.1| Secretion protein HlyD [Reinekea sp. MED297]
 gi|88777674|gb|EAR08873.1| Secretion protein HlyD [Reinekea sp. MED297]
          Length = 419

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 74/220 (33%), Gaps = 9/220 (4%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               V + SP    I+   V  GS +  G  L+  +       +D     + +++    +
Sbjct: 73  SRQQVVVSSPVGADIEAVSVREGSVVEAGDVLVQLDPTALQRQVDQLNARLLDVQARRAS 132

Query: 113 EKSALDFLNNKYDVLEKAFESREE---QLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMK 167
           E++  +      DV E+     +    ++ +   +  ++ +++ N    + +   SL  +
Sbjct: 133 EQTQHENNLRALDVEEQLVAIAQRSVDRIQNLQSQNLTSAAELENAERTLQTQLLSLNNR 192

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              +    L     + +   L + L + ++ L          A    +++Q +     S 
Sbjct: 193 QAAIERFPLTDQQYQAQLIELNSQLDTAKEQLAD----ATVRAAFAAEVSQVQVQAGGSV 248

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                 +       + +        LE    L ++S  L+
Sbjct: 249 SAGAPLLTLVNTEQQELVAWVSANALESVESLSDLSGQLQ 288



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 75/249 (30%), Gaps = 25/249 (10%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            PL     ++T   I+ +      L   + + +  +  +++      +A   RE  +++ 
Sbjct: 43  DPLADAPTVQTLTPINDRYAPQLQLYSQLQSRQQVV--VSSPVGADIEAVSVREGSVVEA 100

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                          +  +   L     R  S      +      +   L++  Q+ +  
Sbjct: 101 GDVLVQLDPTALQRQVDQLNARLLDVQARRASEQTQHENNLRALDVEEQLVAIAQRSVDR 160

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           ++NL  +N  S  +L   ER +    L L                  +   L    Y   
Sbjct: 161 IQNLQSQNLTSAAELENAERTLQTQLLSLNNR-----------QAAIERFPLTDQQY--- 206

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
                   Q    +  S+L   ++     T+ +  A  +   Q  +  +      PL+ +
Sbjct: 207 --------QAQLIELNSQLDTAKEQLADATVRAAFAAEVSQVQVQAGGSV-SAGAPLLTL 257

Query: 322 VPHSKLTYI 330
           V   +   +
Sbjct: 258 VNTEQQELV 266


>gi|119382918|ref|YP_913974.1| RND family efflux transporter MFP subunit [Paracoccus denitrificans
           PD1222]
 gi|119372685|gb|ABL68278.1| efflux transporter, RND family, MFP subunit [Paracoccus
           denitrificans PD1222]
          Length = 380

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 86/259 (33%), Gaps = 29/259 (11%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLN-QQERIVYKSTLEL 230
           +    RL +  +   ++ ++   Q    + +    +  AV   D+  + +     +TL L
Sbjct: 65  ATIAERLTVSGEVRPVQRVILRAQSGGVVAELGAREGEAVRAGDMLVRFDTEELAATLAL 124

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT---- 286
           R++  E             E     A         L+Q +R  A   ++L  L       
Sbjct: 125 RQSEVEATEARLRFARQALERIERLAERTVATQEQLDQARRESAVLQAQLDGLRAQAGIA 184

Query: 287 ---REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQH 341
                   I +P  G +V ++S      A     LM +V     T + A+  +  + +  
Sbjct: 185 RAALRDAEIRAPFDG-VVASRSVDVGERASAEAELMTLV---DPTRLEARVLIATRDVPR 240

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           +  G  A +R      +  +  +  + +I+P+ +          +  V + + D      
Sbjct: 241 IAPGQAAELRI---DGLEGETIEGSVLRINPVAND------GSRFISVHIGLDDP----- 286

Query: 402 NIELRNGFPAEVLFTAKNT 420
           +  LR G  A      +  
Sbjct: 287 DGRLRGGMFATGTILVEER 305



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 71/194 (36%), Gaps = 8/194 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I   ++ SGE+      V +++   G++ +     G  +  G  L+ F+  E    + 
Sbjct: 65  ATIAERLTVSGEVRPV-QRVILRAQSGGVVAELGAREGEAVRAGDMLVRFDTEELAATLA 123

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           L++  ++     +   + AL+ +    + L +   + +EQL     +     +++     
Sbjct: 124 LRQSEVEATEARLRFARQALERI----ERLAERTVATQEQLDQARRESAVLQAQLDGLRA 179

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            +      ++   +R+ +   +   +     RA   +    L     L  +  ++  D+ 
Sbjct: 180 QAGIARAALRDAEIRAPFDGVVASRSVDVGERASAEAELMTLVDPTRLEARVLIATRDV- 238

Query: 218 QQERIVYKSTLELR 231
              RI      ELR
Sbjct: 239 --PRIAPGQAAELR 250


>gi|294674645|ref|YP_003575261.1| RND family efflux transporter MFP subunit [Prevotella ruminicola
           23]
 gi|294472779|gb|ADE82168.1| efflux transporter, RND family, MFP subunit [Prevotella ruminicola
           23]
          Length = 417

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 103/308 (33%), Gaps = 82/308 (26%)

Query: 44  VSSSGEILNEDNVVEIK--SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           V ++G++L    +  ++      GI+ +  VE G+ + +G  ++   +            
Sbjct: 63  VRTNGQVLP---IQIVQISPEEGGIVMEKVVEEGTMVHKGDVIVRLSNSNLD-------- 111

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                          L  LN + ++ EK    R  Q+                       
Sbjct: 112 ---------------LQILNAEAELAEKQNLLRNTQV----------------------- 133

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                      ++  +RL+ + + + L       Q+     K L+ +  +S+ D  + + 
Sbjct: 134 -----------AMQQDRLNNQTEQAQLDMDTHRKQRTYDQNKRLYAEKLISKEDYIKSQE 182

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             Y+ + + R  I +                L+  +  + +   ++Q +    +    + 
Sbjct: 183 D-YQLSAKKRSLITK---------------RLKQDSIYRTV--QMDQMEDNLQNMRKNVV 224

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           ++ + +++  I S I G  +           Q  Q + ++   S    ++A +    I  
Sbjct: 225 LVRQRKDKLEIRSAIDGE-LGLLDVELGQSIQPGQKIGQLNDLSD-YKVQASIDEHYIDR 282

Query: 342 VKKGYTAT 349
           V+ G +AT
Sbjct: 283 VRPGLSAT 290


>gi|226314538|ref|YP_002774434.1| hypothetical protein BBR47_49530 [Brevibacillus brevis NBRC 100599]
 gi|226097488|dbj|BAH45930.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 415

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/349 (12%), Positives = 107/349 (30%), Gaps = 91/349 (26%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I    VE G+ +  G  L T +                                   
Sbjct: 77  SGKISGILVEKGATVKAGQTLATLDGTA-------------------------------- 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                 H+   +V +  I     +   +   +++  L       
Sbjct: 105 -----------------LQQGIHAAQGQVASAAIKREKAAKGPESHELQTKKL------- 140

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +    R  +   + +L+  + L+   A+S+++ ++    + ++ L L E      N+L+ 
Sbjct: 141 QVEKAREQMQKARDELSKAEILYANGAISKDEKDKLASALRQAELSLEEEQVAYNNLLKG 200

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L                 D+E+   +      +L+  ++      I +P  G +V  
Sbjct: 201 ADPL-----------------DIEEANASIQQANVQLSRAKQEAADAVIKAPFTG-VVAA 242

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            S ++S  A     ++++V  +    ++  +  +QI H + G    V+ P        + 
Sbjct: 243 ISKTASEQAGPGTEVIRMV-DTSSWLVKLHIEREQIAHWQAGKVVKVKAP-----DGSEA 296

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           +  +  + P++     +      Y V + +     +        G    
Sbjct: 297 EGKVTFVSPVMDTSLGS------YPVEVTVDGKKVAWKG-----GMTVT 334


>gi|157369572|ref|YP_001477561.1| hypothetical protein Spro_1329 [Serratia proteamaculans 568]
 gi|157321336|gb|ABV40433.1| secretion protein HlyD family protein [Serratia proteamaculans 568]
          Length = 328

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 93/255 (36%), Gaps = 21/255 (8%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS---QNDLNQQERIVY 224
           +  ++    N    + K +LL A      +++  +++   +   +    +   ++++ ++
Sbjct: 81  INALQQAQANVGSAKAKLALLMAGY--RAEEIAQVRSEMAQRLSAFSYADSFLKRQQGLW 138

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTIL 283
                  + + + +            +  + A YL     +++E+ +   A   + L   
Sbjct: 139 AKNATSADALEDARTSRNQAQANLQASKDKLAQYLSGNRPQEIEEAKANLAQSEAALAQA 198

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +      T++SP AGT++  ++            +  +   ++  ++RA V    +    
Sbjct: 199 QLNLHDTTLVSPSAGTVLT-RAVEPGTMLSAGGTVFTLS-LTRPVWVRAYVNETSLSKAT 256

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAF 398
            G    +   +     +K +   I  + P       S +  +L+T   Y + + +TD   
Sbjct: 257 PGTELEI---YTDGRPDKPYHGKIGFVSPTAEFTPKSVETPDLRTDLVYRLRVIVTDADD 313

Query: 399 SDNNIELRNGFPAEV 413
           +     LR G P  V
Sbjct: 314 A-----LRQGMPVTV 323



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 81/293 (27%), Gaps = 25/293 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V+ G  +  G  L   +D    + +   + ++ + +  +    +         
Sbjct: 53  GRLASLTVDEGDTLQPGQLLGKLDDAPYINALQQAQANVGSAKAKLALLMAGYRAEEIAQ 112

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E A         D   K              ++  +   +     ++  ++  L   
Sbjct: 113 VRSEMAQRLSAFSYADSFLKRQQGLWAKNATSADALEDARTSRNQAQANLQASKDKLAQY 172

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
            S  R      Q+      NL +  A  +Q  LN  +  +   +         +   +  
Sbjct: 173 LSGNRP-----QEIEEAKANLAQSEAALAQAQLNLHDTTLVSPSAGTVLTRAVEPGTMLS 227

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                   +L    +   +   + +   + A   ++L I    R  K    P  G I + 
Sbjct: 228 AGGTVFTLSLTRPVW---VRAYVNETSLSKATPGTELEIYTDGRPDK----PYHGKIGFV 280

Query: 304 Q---SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ-HVKKGYTATVRF 352
                F+  +                    R +V        +++G   TVRF
Sbjct: 281 SPTAEFTPKSVETPD--------LRTDLVYRLRVIVTDADDALRQGMPVTVRF 325


>gi|113475284|ref|YP_721345.1| RND family efflux transporter MFP subunit [Trichodesmium erythraeum
           IMS101]
 gi|110166332|gb|ABG50872.1| efflux transporter, RND family, MFP subunit [Trichodesmium
           erythraeum IMS101]
          Length = 631

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 22/254 (8%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS-------------------I 103
            SG++K   VE G ++ +G  +   +  +T     +                       I
Sbjct: 120 QSGLLKFIYVEEGKKVGKGEAIAQLDTSQTQAQKSVLIAQKERAIATLKELQTGPRVEVI 179

Query: 104 KNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
              R  +  EK+ L  L    + +V+     S  ++             +V     +S+ 
Sbjct: 180 AATRASLAQEKAKLQELQTGPRVEVIAATRASLTQEQAKLQELQTGPRVEVIAATRASLT 239

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSL-LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +                ++      L L   +   Q      + L+++ A+SQ  L+   
Sbjct: 240 QEQAKLQELQTGTRTEDIEAARSVVLDLEEQVELAQLREKRREELYKQGAISQEQLDVAS 299

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                    L+    E + +         EA       ++    +L    R    E+ K 
Sbjct: 300 TETDTLNARLKRGRSELEKLQTGTRREQIEAQKARVRQVQSQLDELIAGTRREQIEVQKA 359

Query: 281 TILEKTREQKTILS 294
            + +   +   +++
Sbjct: 360 RVRQVQSQLDELIA 373


>gi|332702487|ref|ZP_08422575.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332552636|gb|EGJ49680.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 438

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 63/167 (37%), Gaps = 8/167 (4%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRT 272
           D N+  R +  +   L+     Q+N  R     +   E      + L +   +    Q  
Sbjct: 107 DANKLLRELAANQAALQSARASQENARRTYQRFWRLYERRTVSKDELDQRQTEFRVAQAE 166

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            +   +++ +  +  E   I +P+AG +         +Y ++   L+ +  +S    I  
Sbjct: 167 VSRLEAQVALNRERLEDMRIRAPMAGKVSQRNVD-VGDYVEEGDELVTL--YSDRLEITF 223

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            V+ + +  V+ G    +    Y+++   +F+  +  + P ++    
Sbjct: 224 DVSERYMGRVRLGQPVRITVTAYSEL---EFEGRVSFVSPSVNVATR 267



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 71/191 (37%), Gaps = 7/191 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L    VV I+   SGI+++     G ++ +G  L   +  +    +   + ++
Sbjct: 64  VTGIGTLLAV-EVVRIRPEASGIVREIGFREGERVNKGALLFLLDANKLLRELAANQAAL 122

Query: 104 KNLRCHIDTEKSALD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           ++ R   +  +        L  +  V +   + R+ +      +     ++V        
Sbjct: 123 QSARASQENARRTYQRFWRLYERRTVSKDELDQRQTEFRVAQAEVSRLEAQVALNRERLE 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              ++  +     +    +D+ +       L++ +   L +  ++ E+  + +  L Q  
Sbjct: 183 DMRIRAPMAG--KVSQRNVDVGDYVEEGDELVTLYSDRLEITFDVSER-YMGRVRLGQPV 239

Query: 221 RIVYKSTLELR 231
           RI   +  EL 
Sbjct: 240 RITVTAYSELE 250


>gi|307292935|ref|ZP_07572781.1| secretion protein HlyD family protein [Sphingobium chlorophenolicum
           L-1]
 gi|306881001|gb|EFN12217.1| secretion protein HlyD family protein [Sphingobium chlorophenolicum
           L-1]
          Length = 332

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 54/358 (15%), Positives = 109/358 (30%), Gaps = 79/358 (22%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I + + E G  +  G+ L T + +                  ++  E++       
Sbjct: 46  DSGRIAQVRAEEGDSVKAGSILATLDTVS----------------LNLQAEEAKAQGEVQ 89

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           + ++L     SR E++                               R+ S+       E
Sbjct: 90  RQNLLRLRNGSRPEEIA--------------------------QAQARLTSVEAEAARAE 123

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              + LR + +S Q              VS  D++   +    +    RE     +   R
Sbjct: 124 GDLARLRGIAASTQGRG-----------VSAQDVDHASKTAVAARARAREQAEALRLARR 172

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                                 D+   +       +++ +L+   +Q  + +P+ G +V 
Sbjct: 173 GPRA-----------------EDVAGGEAQVKAAQAQVALLQHRIDQGVLRAPVDG-VVR 214

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           ++     + A   + +  I   +   ++R  V    +  +K G  A+V      D     
Sbjct: 215 SRLLEPGDMASPQKAVFAIA-LADPKWVRVYVNQPDLGRIKPGMAASVVSDSMPDQPVPG 273

Query: 363 FKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
               I  +     +  +   L+T   YEV +++ D A       LR G P  V     
Sbjct: 274 RIGYISSVAEFTPKSVETEELRTSLVYEVRVQVEDKA-----NRLRLGQPVTVRINTG 326


>gi|291539958|emb|CBL13069.1| hypothetical protein RO1_26190 [Roseburia intestinalis XB6B4]
          Length = 464

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/364 (10%), Positives = 117/364 (32%), Gaps = 44/364 (12%)

Query: 67  IKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           +++    +G  + +G  L    D        +  D I   + ++K    ++ + K + + 
Sbjct: 84  VEEVYASSGDTVSKGDALFKLTDESMEAAKSDYEDAISDAENTLKTAEANLASGKLSAES 143

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                D+  +      +  +D L        + ++  +  +      +     + Y    
Sbjct: 144 TKQDADLTAQTAADSYQAQVDALDAAVEEKKEAYDEAVEQISE---YQTKIDNNDYYVEC 200

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            ++ K   + A  ++  +    +    +    +Q+ L Q ++    +     +N+ E   
Sbjct: 201 AIDEKKDAVDAATTALAQAQDTLTQAQQSADAAQSTLEQAQKEFDSAVETYNKNVEETNT 260

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRT------------------FADEMSKLT 281
            +  + +  D+   ++    ++ +    + Q                     ++  S + 
Sbjct: 261 KITELTDSLDDLKSDYEQAERDATMQKAELQNEYDTAVVEGKYAGSTYESTVSELESAVE 320

Query: 282 ILEKTR-----EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK------IVPHSKLTYI 330
             + T      EQ  +L+   G +  ++  + +    +++  ++      +   ++   I
Sbjct: 321 SAQDTLDTLKEEQTALLALENGVVTADEDGTIAAVPYEAEDTLQSGTAFALYCDTQTIMI 380

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
             +V  + I  V  G   +V        R+      +  I    S       +   Y VI
Sbjct: 381 SVEVPQENIAQVGVGDEVSVMIAG---NRDGAVTGTVSSIA--SSATTGGSVSNVTYAVI 435

Query: 391 LKIT 394
           + I 
Sbjct: 436 ISID 439


>gi|256061145|ref|ZP_05451299.1| HlyD family protein secretion protein [Brucella neotomae 5K33]
          Length = 347

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 68  LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFNRVSA 127

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 128 LVHDKFEARAQFDQAERALQVAKQEQNVAASAAAATLAQLGGTLDKPLQQHASYLA---- 183

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 184 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFLAVGDPAFTLI-- 230

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 231 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITP 275



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/231 (9%), Positives = 66/231 (28%), Gaps = 24/231 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIKSPFSGIIKKF 70
            + + ++  +  I +  W             G+ ++ED+       V I    SG + + 
Sbjct: 3   RRILLIVGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAITPQVSGQVIRV 54

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V     + +G  L   +       +D  K ++      +    + L     +       
Sbjct: 55  AVGPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKL----AGLVLTYKQQLASVAQ 110

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +       +   +  +     F            +++ +              + L   
Sbjct: 111 AKDDVTFAQEQFNRVSALVHDKFEARAQFDQAERALQVAKQEQNVAASAAAATLAQLGGT 170

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           L    Q+  +    L  K   ++ +L ++   + +        + + +N+ 
Sbjct: 171 LDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPFAGTVTQVENIQ 215


>gi|32476002|ref|NP_868996.1| hypothetical protein RB9643 [Rhodopirellula baltica SH 1]
 gi|32446546|emb|CAD76381.1| probable membrane protein [Rhodopirellula baltica SH 1]
          Length = 420

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 79/227 (34%), Gaps = 23/227 (10%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+    ++       ++  DL + E    +S   L     ++ N LR  N        E 
Sbjct: 111 QQYEIALEKATAAYRLAAADLVRLEAQSQQSQRNL-----DRANQLRSTNS--QSVYDEI 163

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
               +  +  L   Q    +  +++   + + E   I SPI G ++  ++     Y    
Sbjct: 164 VTAHEMATAMLAVGQAKLEEAEAEVHHAKVSLENTNIRSPIDGIVIDRRAN-LGQYVSVG 222

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFKAIIEKIDPI 373
            P + ++        IRA V+   I  V++G   T     +   +     K I+     +
Sbjct: 223 HPGLFLLAKDLDQMQIRASVSESDIGKVQRGQPVTFTVDAHRDQVMTGHVKEIL-----L 277

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            ++   N  T   Y+V++ I        +++L      +V F     
Sbjct: 278 NARMHGNFVT---YDVMVAID-----QTDLKLLPHMTTDVEFEITKR 316


>gi|218658911|ref|ZP_03514841.1| probable protein secretion protein, HlyD family [Rhizobium etli
           IE4771]
          Length = 230

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 62/198 (31%), Gaps = 18/198 (9%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            E     ++      E    A +   N +  I    EQ         +     E      
Sbjct: 19  AEQSQSARDQAAAAVERDRAALVAAENKVPVIRTQREQAVAQRDRAAAAARQAELNLSYT 78

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I++ I GT+   +S     Y      LM +VP   +  + A     Q+ +++ G    +
Sbjct: 79  DIVAAIDGTV-GARSIRVGQYVTSGTQLMAVVPLHAVYVV-ANFKETQLTYIRPGQLVEI 136

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSD 400
           +   +     K  +  ++ + P    +      +  T  + +      V + I D A   
Sbjct: 137 KIDSFP---GKAIRGHVDSVSPASGLEFSLLPPDNATGNFTKIVQRIPVKIVIDDEALGG 193

Query: 401 NNIELRNGFPAEVLFTAK 418
               LR+G   E     K
Sbjct: 194 ---LLRSGMSVEPEIDTK 208


>gi|94313239|ref|YP_586448.1| MFS efflux pump, membrane fusion protein, EmrA subfamily
           [Cupriavidus metallidurans CH34]
 gi|93357091|gb|ABF11179.1| MFS efflux pump, membrane fusion protein, EmrA subfamily
           [Cupriavidus metallidurans CH34]
          Length = 423

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 91/297 (30%), Gaps = 26/297 (8%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + +++       +         +++   +L   + ++ ++Y+N   L       +
Sbjct: 76  AVNADDTEIVRAGDAIVTLDPADARIALANAEAALGQTVRQVSALYVNNNTLAATVQQRQ 135

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             LS  + DL       E  AV+                   E++   ++ ++      +
Sbjct: 136 VDLSRARDDLRRRTEASESGAVA------------------AEDVAHARDTVKAAEAALE 177

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A  + A+      +    +  +     +++        + T+ +P+ G +   +S    
Sbjct: 178 TAKQQLASNHALTDQASVADHPSVQAAATRVRDAYLANARNTLPAPVTGYVAR-RSVQVG 236

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE------KKF 363
                  PLM IVP     ++ A     Q++H++ G    +    Y              
Sbjct: 237 QRVAPGNPLMAIVPLDG-VWVDANFKEVQLKHIRIGQPVELHADLYGGKVTYHGKVVGFS 295

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                    + +Q       +    + ++I           L+ G   +V    +  
Sbjct: 296 AGTGSAFSALPAQNATGNWIKVVQRLPVRIALDPVELRAHPLQVGLSMQVDVETRER 352


>gi|325108909|ref|YP_004269977.1| efflux transporter RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
 gi|324969177|gb|ADY59955.1| efflux transporter, RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
          Length = 412

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 102/311 (32%), Gaps = 33/311 (10%)

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
                 SA+D     + V E  F      L   L    +   +     +           
Sbjct: 41  QTAAVGSAVDGRVADFPVNEGDFVKSGSALAQLLTATITLELESAQAELELRQHEHAELK 100

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
              R   + +      S+      +   K L   + LF++ AV+  +L    +++    +
Sbjct: 101 NGSRPEEVEQARAAMASAQAVQEYNI--KRLKRAEELFQRTAVNSEEL----QLILSQKI 154

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +  ++ ++ K     I +      ++ A    +I   L Q              LE    
Sbjct: 155 KADQDYNQAKAHFDLIQQGPRIEQIQQAEARVKIQEALVQK-------------LEDQLG 201

Query: 289 QKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           + T+ +P  G I  +   +    + Q+ + + +++       +   V  + I+ V KG  
Sbjct: 202 KHTMKAPFDGYI--SAEHTERGQWVQRGELVAEVIKLD-YVDVMTYVPEQYIRFVNKGQQ 258

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             V  P   D     F+  +  + P    Q         + V ++I +    +N   +++
Sbjct: 259 VRVDIPALPDH---LFEGTVALVVPQADVQSRT------FPVKVRI-ENKIDENGPLIKS 308

Query: 408 GFPAEVLFTAK 418
           G  A+V+    
Sbjct: 309 GMMAQVILPTG 319



 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 41/364 (11%), Positives = 97/364 (26%), Gaps = 37/364 (10%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +  F V  G  +  G+ L        T  ++  +  ++  +     E + L   +   
Sbjct: 51  GRVADFPVNEGDFVKSGSALAQLLTATITLELESAQAELELRQ----HEHAELKNGSRPE 106

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +V +        Q +          ++      +     L++ L++      +    +  
Sbjct: 107 EVEQARAAMASAQAVQEYNIKRLKRAEELFQRTAVNSEELQLILSQKIKADQDYNQAKAH 166

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQND--------------LNQQERIVYKSTLEL 230
             L++      Q      +   ++  V + +                  E       ++ 
Sbjct: 167 FDLIQQGPRIEQIQQAEARVKIQEALVQKLEDQLGKHTMKAPFDGYISAEHTERGQWVQR 226

Query: 231 RENIHE-QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            E + E  K     +     E  + F N  +++  D+        +    L + +   + 
Sbjct: 227 GELVAEVIKLDYVDVMTYVPEQYIRFVNKGQQVRVDIPALPDHLFEGTVALVVPQADVQS 286

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS---KLTYIRAKVTPKQIQHVKKGY 346
           +T   P+   I  N+   +    +       I+P         +     PK    +  G 
Sbjct: 287 RTF--PVKVRI-ENKIDENGPLIKSGMMAQVILPTGAESDSLLV-----PKD--AIVLGM 336

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              +                   + P+     +           L   D      N  +R
Sbjct: 337 AQKM-----VYAVVPAEGDKPATVRPVQVVLGSTTSKGIVVRGDLTTDDQVVVRGNDRMR 391

Query: 407 NGFP 410
            G P
Sbjct: 392 PGMP 395


>gi|220904610|ref|YP_002479922.1| HlyD family secretion protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868909|gb|ACL49244.1| HlyD family secretion protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 317

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 100/295 (33%), Gaps = 78/295 (26%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E + V I  P SGI++   V+ G  +++GT L T +                      +
Sbjct: 30  VEGDFVRISLPASGIVENVLVKRGDHVVKGTVLFTLDS---------------------E 68

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            EK+ALD   ++ DV E               +  +  + V N  IS+            
Sbjct: 69  REKAALDKARSELDVAE--------------AQLSNLQATVRNDEISA------------ 102

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                    LE +   L+A L+   K       L    A S +++ +             
Sbjct: 103 ---------LEAEIKELKAQLAYTSKSYRRKFGLSRAGAASLDEVERLR----------- 142

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E++ +   I        L   +  ++   ++E  Q+     ++ +   E     + 
Sbjct: 143 ---SEEQVIKAKILAAESRLRLGQQSIGRD--GEIEAAQKILKYRLAAVRGAEADLALRQ 197

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKK 344
            ++P    +     +         Q +++++P      ++A+  ++P+QI  V +
Sbjct: 198 AMAPADAVVNDI-IYRPGETVAGGQAVLELLPPQN---VKARFFLSPEQIGWVAE 248


>gi|217972015|ref|YP_002356766.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS223]
 gi|217497150|gb|ACK45343.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS223]
          Length = 410

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 73/240 (30%), Gaps = 35/240 (14%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-- 262
            +K   ++Q D   Q+  +  +   L+    + +     I +   E + +      +   
Sbjct: 83  VKKGDLIAQIDSLAQQNNLKDALASLKSINAQFRAKQAQIRQAKLEFSRQQQMLADKASS 142

Query: 263 --------------SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                           +LEQ +         +           I +P+ GT+VY+     
Sbjct: 143 RADYEVADANLTVYQAELEQLEAQKQQAEINVDSARIDLGYTKITAPMDGTVVYSAV-EV 201

Query: 309 SNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                 +Q    IV         ++A+++   + +V  G      F          ++ I
Sbjct: 202 GQTVNANQTTPTIVEMAQLDTMTVKAQISEADVVNVHPGQAVY--FTVLGKPNHP-YRGI 258

Query: 367 IEKIDP-------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  I+P         S   ++     YY  +  +      + +  LR G  A+V      
Sbjct: 259 LRAIEPGPISMDGDDSNMSSSDSDAIYYHGLFDV-----ENPDRTLRIGMTAQVSIVLAK 313



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G +     +V + +  SG I    +  G ++ +G  +   + +   + +   
Sbjct: 46  IENSVLANGMLQAS-KLVSVGAQVSGQILSLPLALGDEVKKGDLIAQIDSLAQQNNLKDA 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             S+K++      +++ +           K   SR++Q+L       +   +V +  ++ 
Sbjct: 105 LASLKSINAQFRAKQAQI--------RQAKLEFSRQQQMLADKASSRADY-EVADANLTV 155

Query: 160 VYRSLKMKLTRMRSIYLN 177
               L+    + +   +N
Sbjct: 156 YQAELEQLEAQKQQAEIN 173


>gi|163797236|ref|ZP_02191190.1| multidrug resistance protein A [alpha proteobacterium BAL199]
 gi|159177531|gb|EDP62085.1| multidrug resistance protein A [alpha proteobacterium BAL199]
          Length = 367

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 49/400 (12%), Positives = 114/400 (28%), Gaps = 52/400 (13%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M LL+ + + G + W  L  +    + +  I  E +   I S  +G ++   +  G+++ 
Sbjct: 1   MVLLAALAVGGTLWW--LHGLGEETTDNAFI--EGDTQTIASEITGRVEAVHLVQGAEVR 56

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           QG  L+  E  +    +   + ++  ++      K+  D   ++ D   +  E+   +  
Sbjct: 57  QGDLLVEVESADAEARVAESEAAL--VKARATVAKADADLAYSRADTTARLAEA---EAA 111

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             L +              + +        R + +  +      +    +A   + +  L
Sbjct: 112 HDLAESELAQRHADVAAAQAEFEQAAADANRYQVLSQSDFASRQRVETAQARRRTTEARL 171

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++                     +  E+     +       + +             
Sbjct: 172 AAARSAVAAGFAEVRRAEAAIATARAAQREIAAREADLAAAGAAVRQS------------ 219

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                             + L       +   I++   G +            Q  Q L 
Sbjct: 220 -----------------EASLRAALVALDHTRIIAAHDGVVSRKSVV-PGQMVQPGQALA 261

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----S 375
            +V   K   + A     Q+  ++ G   T+    Y  +     +  I+ I        S
Sbjct: 262 ALV-FGKPWVV-ANFKETQLTRIRPGQPVTIEVDAYPGL---VLRGRIDSIGRGTGAYFS 316

Query: 376 QQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN---GFPA 411
                  T  + EV+ +I   +  +D    LR    G   
Sbjct: 317 LLPPENATGNFVEVVQRIPVKITINDGFDPLRPLSLGMSV 356


>gi|68171399|ref|ZP_00544792.1| secretion protein, HlyD family [Ehrlichia chaffeensis str. Sapulpa]
 gi|67999194|gb|EAM85851.1| secretion protein, HlyD family [Ehrlichia chaffeensis str. Sapulpa]
          Length = 37

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 17/36 (47%)

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFER 440
           +  G  AEV    ++ TL   +  PIT  + K F +
Sbjct: 1   MYPGMLAEVFIITQSRTLFNYLFTPITSTFEKAFNK 36


>gi|332798295|ref|YP_004459794.1| RND family efflux transporter MFP subunit [Tepidanaerobacter sp.
           Re1]
 gi|332696030|gb|AEE90487.1| efflux transporter, RND family, MFP subunit [Tepidanaerobacter sp.
           Re1]
          Length = 420

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 96/292 (32%), Gaps = 37/292 (12%)

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +L K  E+ +   +    +     S+V     +      ++       +      LE+
Sbjct: 79  EQILVKEGETVKAGQVIIRLEQKDVVSQVNQAQAAYEAAMAQLSSLENGQLPQQIAQLES 138

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             +   A  ++ +++   MK LFE+ A+++      E     +         + ++    
Sbjct: 139 AVNQAEANFNNAKENYERMKALFEQEAITKQQFEGAELQYSIAK-------EQYESAKTQ 191

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++   ++   E           L   Q       + LT  +   +   I SPI G +V  
Sbjct: 192 LDLTKEKTAPE----------SLSMAQAQVKQAEAALTAAKTALDNCLITSPIDG-VVGA 240

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ--IQHVKKGYTATVRFPHYADIREK 361
            S +         P+  +   +    +  ++   +  +  +K G  A V      D    
Sbjct: 241 ISATVGQLVSAGYPVATVGNLNS---VEIQINVTEDRVSGLKVGQEAEVTVDAAGDS--- 294

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             K  +  + P    +       + Y V + +     ++ N+ L++G  A V
Sbjct: 295 VLKGEVISVSPFKDSRT------QVYPVKVLVQ----NEKNL-LKSGMFARV 335



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/134 (9%), Positives = 43/134 (32%), Gaps = 11/134 (8%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +++  V+ G  +  G  ++  E  +    ++  + + +     + + ++    L  +
Sbjct: 75  GGKVEQILVKEGETVKAGQVIIRLEQKDVVSQVNQAQAAYEAAMAQLSSLENG--QLPQQ 132

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              LE A    E    +    Y           + +++    +   +     L     + 
Sbjct: 133 IAQLESAVNQAEANFNNAKENY---------ERMKALFEQEAITKQQFEGAELQYSIAKE 183

Query: 184 KSSLLRALLSSHQK 197
           +    +  L   ++
Sbjct: 184 QYESAKTQLDLTKE 197


>gi|308272508|emb|CBX29112.1| hypothetical protein N47_J00930 [uncultured Desulfobacterium sp.]
          Length = 313

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 86/266 (32%), Gaps = 18/266 (6%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +SS  + +  +L     + + +  +       +      Q + ++++ L  +N    + L
Sbjct: 53  VSSQAQGIITRLKFDEGMLIKKDGILVNVDTEQLGYQLGQNE-SLLEELNNQNNALGSQL 111

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +       ++    ++     L  IN    +   +        +  ++  Q +    
Sbjct: 112 EKAKFERENIRIKYNRFLN-----LLKINAAVQQDVDDLKTQYDSATEQIKYIQSSMDAI 166

Query: 277 MSKLTILE-------KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
            SK    E       K  +   I SP+ GT++  +   +        P+  I       +
Sbjct: 167 KSKKKQAESGTKIINKQLKDTIITSPVTGTVL-VRYVENGELLTSGSPVCDIA-DISTLW 224

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
            +  V  K +  +K G    ++     D   K  +  +  I          + T+E    
Sbjct: 225 TKIYVEEKNLPFIKIGQKVRLKIDGIDD---KTMEGRVSWISDQSEFTPKTILTEETKAS 281

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
           ++    +   ++   L+ G P  V  
Sbjct: 282 LVFAAKVTVLNDKEILKIGMPVTVTV 307



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 15/144 (10%), Positives = 44/144 (30%), Gaps = 9/144 (6%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S   GII + + + G  I +   L+  +  +    +   +  ++ L    +   S L+
Sbjct: 53  VSSQAQGIITRLKFDEGMLIKKDGILVNVDTEQLGYQLGQNESLLEELNNQNNALGSQLE 112

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               + + +   +      L           +      +  +         +++ I  + 
Sbjct: 113 KAKFERENIRIKYNRFLNLL---------KINAAVQQDVDDLKTQYDSATEQIKYIQSSM 163

Query: 179 LDLENKSSLLRALLSSHQKDLTMM 202
             +++K     +      K L   
Sbjct: 164 DAIKSKKKQAESGTKIINKQLKDT 187


>gi|261214048|ref|ZP_05928329.1| HlyD family protein secretion protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|265994978|ref|ZP_06107535.1| HlyD family protein secretion protein [Brucella melitensis bv. 3
           str. Ether]
 gi|260915655|gb|EEX82516.1| HlyD family protein secretion protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|262766091|gb|EEZ11880.1| HlyD family protein secretion protein [Brucella melitensis bv. 3
           str. Ether]
          Length = 388

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 109 LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFNRVSA 168

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 169 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 224

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 225 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFLAVGDPAFTLI-- 271

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 272 GADAWVNSNIKETDLTHIKVGDPATVVLDSYLDQ---PLQGEVQSITP 316



 Score = 43.1 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 25/241 (10%), Positives = 70/241 (29%), Gaps = 24/241 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIK 60
           ++    HP   + + ++  +  I +  W             G+ ++ED+       V I 
Sbjct: 34  QDQSPKHPMLRRILLIVGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAIT 85

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG + +  V     + +G  L   +       +D  K ++      +    + L   
Sbjct: 86  PQVSGQVIRVAVGPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKL----AGLVLT 141

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +        +       +   +  +     F            +++ +          
Sbjct: 142 YKQQLASVAQAKDDVTFAQEQFNRVSALVHDKFEARAQFDQAERALQVAKQEQNAAASAA 201

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
               + L   L    Q+  +    L  K   ++ +L ++   + +        + + +N+
Sbjct: 202 AATLAQLGGTLDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPFAGTVTQVENI 255

Query: 241 L 241
            
Sbjct: 256 Q 256


>gi|206580947|ref|YP_002236678.1| multidrug resistance protein MdtN [Klebsiella pneumoniae 342]
 gi|288933650|ref|YP_003437709.1| secretion protein HlyD [Klebsiella variicola At-22]
 gi|290511271|ref|ZP_06550640.1| multidrug resistance protein MdtN [Klebsiella sp. 1_1_55]
 gi|206570005|gb|ACI11781.1| multidrug resistance protein MdtN [Klebsiella pneumoniae 342]
 gi|288888379|gb|ADC56697.1| secretion protein HlyD family protein [Klebsiella variicola At-22]
 gi|289776264|gb|EFD84263.1| multidrug resistance protein MdtN [Klebsiella sp. 1_1_55]
          Length = 341

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 78/233 (33%), Gaps = 24/233 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     + +          ++++   + +    +++   N   +       RAL+     
Sbjct: 76  LFRIDPRPYQAMLDDAKARLTTLDAQIMLTQRTIKAQEYNAQSVAAAVERARALVKQTTS 135

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             T ++ L  +   SQ DL+Q       +  EL   + + +     +             
Sbjct: 136 TRTRLEPLVPQGFASQEDLDQARTAEKAARAELEATLLQARQASAAV------------- 182

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                   ++      A  ++++ + E   E   + +P  G +V  ++ +   YA   +P
Sbjct: 183 ------TGVDAMVAQRAGILAQIALAELHLEFTEVRAPFNGVVVALKT-TVGQYASALKP 235

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +  ++      Y+ A      + +V+ G  A +          + F  +++ +
Sbjct: 236 VFTLL-DDDRWYVIANFRETDLNNVRPGVAARITV---MTNHNRTFNGVVDSV 284


>gi|163869182|ref|YP_001610434.1| secretion protein [Bartonella tribocorum CIP 105476]
 gi|161018881|emb|CAK02439.1| secretion protein [Bartonella tribocorum CIP 105476]
          Length = 335

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 76/201 (37%), Gaps = 4/201 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           + +   +    +  LS I  + LI W+  L P   ++  +     + NV  + S  SG+I
Sbjct: 1   MIKALRSKATIVAFLSGITGVLLILWAWRLPPFVSNIQITDNASIKGNVTLVSSQISGVI 60

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V++  ++ +G  L   +D      +   +  + +    + + +     L  + +  
Sbjct: 61  ARIYVQDYQRVEKGMLLFELDDSLFRQQLARAQAVLDSKNAKLASIELQAQILQGEVNAA 120

Query: 128 EKAFESREE---QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           E            + D      S  +   +  +S +  +L+ K    R + L R  L+++
Sbjct: 121 EAELARSRAFSNVVPDSKKLGFSDAAHSVSRPLSQLLAALETKRQLQRQLNLERQSLQSE 180

Query: 185 SSLLRALLSSHQKDLTMMKNL 205
            +  +  +   + +L   K L
Sbjct: 181 VAGAKVSVELAKLNLDHTKIL 201



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 86/274 (31%), Gaps = 31/274 (11%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F    S   + L      + S       +E ++ +L+  +++ + +      L    A 
Sbjct: 77  LFELDDSLFRQQLARAQAVLDSKNAKLASIELQAQILQGEVNAAEAE------LARSRAF 130

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S    + ++     +   +   + +    L    +L  + NLE  +   E++        
Sbjct: 131 SNVVPDSKKLGFSDAAHSVSRPLSQLLAALETKRQLQRQLNLERQSLQSEVAG------A 184

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             + E++KL       +   ILSP  G I          Y      L+ ++  S   +I 
Sbjct: 185 KVSVELAKLN-----LDHTKILSPRTGYI-GLVGARVGQYVMPGTQLVSVI--SDDIWII 236

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYY 387
           A     Q+  ++ G           +   KK    + +  P    +      +     + 
Sbjct: 237 ANYKETQLSQMRVGQPVVFSVDALNN---KKLTGRVVRFAPATGSEFSLLKTDTTIGNFI 293

Query: 388 EVILKIT---DLAFSDNNIE-LRNGFPAEVLFTA 417
           ++  +I+    L      IE L  G         
Sbjct: 294 KIAQRISVRIALDPGQEGIEKLIPGMSVVTYVDT 327


>gi|146306524|ref|YP_001186989.1| secretion protein HlyD family protein [Pseudomonas mendocina ymp]
 gi|145574725|gb|ABP84257.1| secretion protein HlyD family protein [Pseudomonas mendocina ymp]
          Length = 284

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 35/233 (15%)

Query: 207 EKNAVSQNDLNQ-QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           +   V+ ++L    +R  Y+  LE  + + E +     + E   EA        + IS +
Sbjct: 61  DNQHVAADELLMSLDRERYQVALEQAQAVAETRRQQLLLRE--HEAGRRMRLGPQAISAE 118

Query: 266 LEQN--------QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           L  N        +  +      +   E    +  + +P AG +   +  +  NY +  +P
Sbjct: 119 LRDNAQISAEIARGEYRQAQVAVRSAELDLARSEVRAPRAGQVTNLRL-AEGNYVRAGEP 177

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++ +V      Y++A     ++  ++ G    +             +  +E I   I+ +
Sbjct: 178 VLALV-DESSFYVQAYFEEIKLPRIRIGAPVEIWLMSGDQ----PLRGEVESISRGIADR 232

Query: 378 DNNLQTQ---------------EYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + +   Q               +   V +K+ ++      + L  G  A V  
Sbjct: 233 NASPDGQLLADVEPTFNWVRLAQRIPVRIKLDEV---PEGVVLSAGMTASVRV 282



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/196 (10%), Positives = 59/196 (30%), Gaps = 1/196 (0%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV I    +G +++ +V +   +     L++ +       ++  +   +  R  + 
Sbjct: 39  VRADVVTIAPDLAGWVRELKVRDNQHVAADELLMSLDRERYQVALEQAQAVAETRRQQLL 98

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +               A      Q+   + +     ++V            +++  R 
Sbjct: 99  LREHEAGRRMRLGPQAISAELRDNAQISAEIARGEYRQAQVAVRSAELDLARSEVRAPRA 158

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-QERIVYKSTLEL 230
             +   RL   N       +L+   +    ++  FE+  + +  +    E  +      L
Sbjct: 159 GQVTNLRLAEGNYVRAGEPVLALVDESSFYVQAYFEEIKLPRIRIGAPVEIWLMSGDQPL 218

Query: 231 RENIHEQKNMLRHINE 246
           R  +      +   N 
Sbjct: 219 RGEVESISRGIADRNA 234


>gi|21673216|ref|NP_661281.1| hypothetical protein CT0377 [Chlorobium tepidum TLS]
 gi|21646299|gb|AAM71623.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 327

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 51/150 (34%), Gaps = 28/150 (18%)

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            S++    K   Q  ++SPI G ++   S +       S  +M +   S    +RA V  
Sbjct: 111 QSEIDYWNKVYNQTALISPIDGQVI-VSSLNPGQTITTSDAVMVL---SDRLIVRANVDE 166

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE------VI 390
             I +VK G  A +    Y DI     + +++ I               YYE      V 
Sbjct: 167 TDIGNVKLGQKAVISLDAYPDIH---VEGVVDHI---------------YYESTLVNNVN 208

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +   D+         R+G  A V       
Sbjct: 209 IYHVDIVPRKVPEVFRSGMSANVDIVVNEK 238



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   VS++  I    N +EIKSP SG I K  V+ G  + +G  L      E   L+D  
Sbjct: 48  IRQLVSTTATITP-QNRLEIKSPVSGRIDKILVKEGDFVKKGQVLALVSSTERAALLDAA 106

Query: 100 KVS 102
            + 
Sbjct: 107 TLK 109


>gi|77359271|ref|YP_338846.1| cation efflux system protein [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874182|emb|CAI85403.1| putative cation efflux system protein [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 582

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 65/179 (36%), Gaps = 16/179 (8%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L +  E +  A       L   ++   ++     D + +L   ++  +  T  +  +G 
Sbjct: 160 QLVNAQEEFLLALNRNNQVLIRAAKARLKSLNISDDFVERLQKSKQVMQNITFYAIQSGV 219

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +          Y      +M I    +  ++ A+V  +Q + +K G   ++       + 
Sbjct: 220 VEELNVR-EGFYVNPGTTMMSIGKLDE-VWVEAQVFERQAELIKIGQPVSMTL---DYLS 274

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            + ++  ++ I P +  ++  L       V L+     F++   +L+    A+V    +
Sbjct: 275 GQSWQGKVDYIYPTLDAKNRTL------RVRLR-----FNNEGHKLKPNMFAQVNIHTQ 322


>gi|182415454|ref|YP_001820520.1| RND family efflux transporter MFP subunit [Opitutus terrae PB90-1]
 gi|177842668|gb|ACB76920.1| efflux transporter, RND family, MFP subunit [Opitutus terrae
           PB90-1]
          Length = 455

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 75/235 (31%), Gaps = 23/235 (9%)

Query: 194 SHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              K L    ++ +K   V+  D    E  +  +  +L       + +  +   +     
Sbjct: 73  IIDKVLVDYNSVVKKGDVVAHIDAGTYETRLRSAEADLANARANYRLVELNAQRIRSLRE 132

Query: 253 LEFA--NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            E    + L +    L Q +       + +   +    + TI SP+ G ++  Q      
Sbjct: 133 QELVPPSDLDQALAQLAQAEAQVQTRTAAVESAKIDLSRCTIYSPVDGIVLSRQVD-VGK 191

Query: 311 YAQQS--QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
               S   P++  + +      I   +    I +V+ G         + + +   F+  +
Sbjct: 192 TVAASFNTPVLFTIANDLTKMQIEGAIAEADIGNVEVGQAVKFTVDAFPNRQ---FEGRV 248

Query: 368 EKI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             I   P+  Q          YE I+ +      +++ +LR G  A V       
Sbjct: 249 SSIRNSPVTVQNVVT------YETIIDV-----RNDDQKLRPGMTANVSVIVAQR 292



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 76/223 (34%), Gaps = 24/223 (10%)

Query: 18  KRMTLLSIIGIIGLITWSIL-----------------LPIEISVSSSGEILNEDNVVEIK 60
             +  L ++ + G   W  L                   +   V+++G +     V E+ 
Sbjct: 9   GIVLTLLVLAVAGAGLWYWLNRRAEKPAEYVTVPVTRADLTQVVTATGTLQPVITV-EVG 67

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSAL 117
           S  SGII K  V+  S + +G  +   +       +   +  + N R +   ++     +
Sbjct: 68  SQISGIIDKVLVDYNSVVKKGDVVAHIDAGTYETRLRSAEADLANARANYRLVELNAQRI 127

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             L  +  V     +    QL     +  +  + V +  I     ++   +  +      
Sbjct: 128 RSLREQELVPPSDLDQALAQLAQAEAQVQTRTAAVESAKIDLSRCTIYSPVDGIVLSRQV 187

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            +     +S    +L +   DLT M+    + A+++ D+   E
Sbjct: 188 DVGKTVAASFNTPVLFTIANDLTKMQI---EGAIAEADIGNVE 227


>gi|149175112|ref|ZP_01853735.1| Secretion protein HlyD [Planctomyces maris DSM 8797]
 gi|148846090|gb|EDL60430.1| Secretion protein HlyD [Planctomyces maris DSM 8797]
          Length = 418

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 52/388 (13%), Positives = 115/388 (29%), Gaps = 89/388 (22%)

Query: 37  LLPIEISVSSSGEILNED----NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           +  I     +SG+             I S   G + +F V  G  +    PL        
Sbjct: 19  VAKIVEREVASGQTFVGTVMPIKRSVIGSAVGGRVAEFPVNEGDFVRARQPLAQL----- 73

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                        +   +D+EK+ LD               R+E+L + +        K 
Sbjct: 74  ---------LTNTINLELDSEKATLDL--------------RKEELNELVNGTRPDEIKR 110

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               + +     + +  R++                             +++L+ + AV+
Sbjct: 111 AKALMMAAKADSEYQQKRLKR----------------------------LESLYARKAVN 142

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            +D+    + V   ++   E   E +   +   E   +  +  A     + + L      
Sbjct: 143 DDDI----QAVVSESIRAEEMFSEAEAAYKLAVEGPRKEQIAQAKARVAVQQALVDK--- 195

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                     LE    + TI+SP  G +V   +     +    + + +++       +  
Sbjct: 196 ----------LESQVVKHTIISPFDGYVVAEHT-EVGQWVNSGELVAEVIALDH-VDVSV 243

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +V    + HV+      V  P   +     F   +  I P    +         + V ++
Sbjct: 244 QVLENHVPHVQLKSEVRVEIPAIPNQ---VFTGEVVMIVPQADIRART------FPVKVR 294

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + +    D  + L++G  A  +      
Sbjct: 295 LKNEIRKDGPL-LKSGMLARAVLPTGPR 321


>gi|86140725|ref|ZP_01059284.1| membrane fusion efflux protein, putative [Leeuwenhoekiella
           blandensis MED217]
 gi|85832667|gb|EAQ51116.1| membrane fusion efflux protein, putative [Leeuwenhoekiella
           blandensis MED217]
          Length = 419

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 96/329 (29%), Gaps = 59/329 (17%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +     L   ++T  +           +         +L    G+       +       
Sbjct: 39  ETQEIALATVVETVAATGKIQPETEVKISSEVSGEIIELPVVEGQQVEKGDLLVRINPDL 98

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +  +L      ++++  N+   E    + +A    +QK       LFEK  +S+++ +Q 
Sbjct: 99  IQSALTQAQASLQNVKANQAQSEAALKVAKANYERNQK-------LFEKGVISRSEWDQS 151

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                 +   ++   +  ++   ++N+                                 
Sbjct: 152 ISDYEIAQANVKSAYYNVQSAAANVNQSR------------------------------- 180

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVT 335
                    + +I +PI+GTI                     +M+ V       +   V 
Sbjct: 181 -----DNLSRTSIYAPISGTISKLDVELGERVVGTQQMAGTEMMR-VADLGNMEVEVDVN 234

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              I  +  G +  V    Y    +K+F+  + +I    ++ +        ++V ++I +
Sbjct: 235 ENDIVKINIGDSTRVEVDAY---LKKRFRGEVTEI-ANSAESNLTADQVTNFKVKVRILE 290

Query: 396 LAFSDNNI-------ELRNGFPAEVLFTA 417
            ++ D            R G  A V    
Sbjct: 291 ESYKDLTEGKPEAYSPFRPGMTATVDIIT 319



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 6/198 (3%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            L  +  +V+++G+I  E  V  I S  SG I +  V  G Q+ +G  L+          
Sbjct: 44  ALATVVETVAATGKIQPETEVK-ISSEVSGEIIELPVVEGQQVEKGDLLVRINPDLIQSA 102

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   + S++N++ +    ++AL      Y+  +K FE       ++         ++   
Sbjct: 103 LTQAQASLQNVKANQAQSEAALKVAKANYERNQKLFEKGVISRSEWDQSISDY--EIAQA 160

Query: 156 GISSVY---RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            + S Y   +S    + + R            S  +  L     + +   + +     + 
Sbjct: 161 NVKSAYYNVQSAAANVNQSRDNLSRTSIYAPISGTISKLDVELGERVVGTQQMAGTEMMR 220

Query: 213 QNDLNQQERIVYKSTLEL 230
             DL   E  V  +  ++
Sbjct: 221 VADLGNMEVEVDVNENDI 238


>gi|330811568|ref|YP_004356030.1| hypothetical protein PSEBR_a4610 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379676|gb|AEA71026.1| Conserved hypothetical protein; putative exported protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 385

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 87/241 (36%), Gaps = 14/241 (5%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S  G +L   + V I+    GI+ +  V+ G  + +G  L T +D      +D  +  +
Sbjct: 55  ASGIGTVL-SLHSVVIRPQIDGILTRLLVKEGQLVKKGDLLATIDDRSIRASLDQARAQL 113

Query: 104 KNLRCHIDTEKSALDF--LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
              +  +   +  L    L +  D + K    +++ L++ L           +       
Sbjct: 114 GESQAQLAVAQVNLKRYKLLSVDDGVSKQTYDQQQALVNQLKATAQGNQAAIDS------ 167

Query: 162 RSLKMKLTRMRSIYLNRLDLEN--KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             +++  T++RS    R+ + N  + + LR   +     +T +  +  + ++ Q  L   
Sbjct: 168 AQVQLSYTQIRSPVSGRVGIRNVDEGNFLRTSDTEGLFTVTQIDPIAVEFSLPQQMLPTL 227

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +R++      L   +           EL  E  L   +     +    + +  F +   +
Sbjct: 228 QRLIAAPEQAL---VKAYIGADGATGELLGEGRLSLIDNQINANTGTLRAKAEFNNAAQR 284

Query: 280 L 280
           L
Sbjct: 285 L 285



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 10/140 (7%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQ--ERIVYKSTLELRENIHEQKNMLRH 243
            L +++   Q D  + + L ++   V + DL     +R +  S  + R  + E +  L  
Sbjct: 63  SLHSVVIRPQIDGILTRLLVKEGQLVKKGDLLATIDDRSIRASLDQARAQLGESQAQLAV 122

Query: 244 INELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                    L             +    + Q + T     + +   +       I SP++
Sbjct: 123 AQVNLKRYKLLSVDDGVSKQTYDQQQALVNQLKATAQGNQAAIDSAQVQLSYTQIRSPVS 182

Query: 298 GTIVYNQSFSSSNYAQQSQP 317
           G +   ++    N+ + S  
Sbjct: 183 GRV-GIRNVDEGNFLRTSDT 201


>gi|326801520|ref|YP_004319339.1| efflux transporter RND family, MFP subunit [Sphingobacterium sp.
           21]
 gi|326552284|gb|ADZ80669.1| efflux transporter, RND family, MFP subunit [Sphingobacterium sp.
           21]
          Length = 453

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 71/187 (37%), Gaps = 19/187 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSILLP-------------IEISVSSSGEILNEDNVVEIKSPF 63
           +  + LL ++ I G + W                  ++ +VS+SG++  E  V  + S  
Sbjct: 14  IGAVVLLILVVIAGKMGWIGGPKKELIATEKAEKRTVQETVSASGKVQPEKEVK-LSSEV 72

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I +  V+ G  + +G  L   +        D    S+ + R  + + +  L      
Sbjct: 73  SGEIVELNVKEGEVVTKGQILCRIKPDILQSGYDKAVASLNSQRAALASAQQQLKQSEAS 132

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +++E  F+  ++     L       +  F+   +    +L     + +++  +R  ++ 
Sbjct: 133 LNIMEATFKRTQQ-----LYNRKVISAAEFDKARTDYESALASVEAQRQNVIGSRYGIDQ 187

Query: 184 KSSLLRA 190
             + ++ 
Sbjct: 188 SQAAVKE 194



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/317 (14%), Positives = 97/317 (30%), Gaps = 33/317 (10%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           EKA +   ++ +   GK         +  +S     L +K   +  +   ++    K  +
Sbjct: 43  EKAEKRTVQETVSASGKVQPEKEVKLSSEVSGEIVELNVKEGEV--VTKGQILCRIKPDI 100

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L++        L   +        +Q  L Q E  +       +         +    E 
Sbjct: 101 LQSGYDKAVASLNSQRAALAS---AQQQLKQSEASLNIMEATFKRTQQLYNRKVISAAEF 157

Query: 248 YDEANLEFANYLKEISRDLEQN---QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            D+A  ++ + L  +    +     +       + +        + TI +P+ G I +  
Sbjct: 158 -DKARTDYESALASVEAQRQNVIGSRYGIDQSQAAVKEAGDNLARTTIYAPVDGVISWLG 216

Query: 305 SFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           +                +M+I  +     +   V    I  V     AT+    +   R 
Sbjct: 217 AEQGERVVGTAQMAGTEIMRIA-NMSSMEVNVDVNESDINRVSLNNEATIEIDAF---RG 272

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEY---------YEVILKITDLAFSD-------NNIE 404
           +KFK I+ +I    S    +  +            + V ++I   ++ D       N   
Sbjct: 273 RKFKGIVTEIASSSSANALSSSSTTTTSNTDQVTNFTVKVRILPESYEDLLKPNRPNPSP 332

Query: 405 LRNGFPAEVLFTAKNTT 421
            R G  A V    +  T
Sbjct: 333 FRPGLSATVDILTEKDT 349


>gi|325275277|ref|ZP_08141233.1| secretion protein HlyD family protein [Pseudomonas sp. TJI-51]
 gi|324099585|gb|EGB97475.1| secretion protein HlyD family protein [Pseudomonas sp. TJI-51]
          Length = 285

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 78/224 (34%), Gaps = 34/224 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN------ 269
           L   +R  +++  +    + + +     + E   EA    A     IS +L +N      
Sbjct: 71  LMSIDRERFQAAFDQASAVTQTRAQQLRLRE--SEAARRTALGPGAISAELRENAQINAA 128

Query: 270 --QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +    +  ++L + +    +  + +P +G I   +  +  NY    Q +M +V     
Sbjct: 129 IARGELQEAQAQLQVAKINLARSEVRAPRSGHITNLRL-AEGNYVNTGQSVMALV-DDST 186

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--- 384
            YI+A     ++  ++ G    V          +  +  +E I   I+  ++N  +Q   
Sbjct: 187 FYIQAYFEETKLPRIRVGDPVKVWL----MGAGEPMQGHVESISRGITDSNSNPDSQLLP 242

Query: 385 ------------EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                       +   V +++  +    + + L  G  A V   
Sbjct: 243 EVEPTFNWVRLAQRIPVRIRLDQV---PDGVTLSAGMTASVQVH 283



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 60/186 (32%), Gaps = 14/186 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSI--LLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           R    +L  + ++++  + G   W    L P         +++       I    SG ++
Sbjct: 2   RAAVRTLVTLCVVALAVLAGYQLWQYYMLTPWTRDARVRADVVV------IAPDVSGWVR 55

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKV--SIKNLRCHIDTEKSALDFLNNKYDV 126
           + +V +  Q+  G  L++ +        D        +  +  +   ++A         +
Sbjct: 56  QLKVHDNQQVKAGELLMSIDRERFQAAFDQASAVTQTRAQQLRLRESEAARRTALGPGAI 115

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKV----FNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             +  E+ +       G+     +++     N   S V       +T +R    N ++  
Sbjct: 116 SAELRENAQINAAIARGELQEAQAQLQVAKINLARSEVRAPRSGHITNLRLAEGNYVNTG 175

Query: 183 NKSSLL 188
                L
Sbjct: 176 QSVMAL 181


>gi|152979012|ref|YP_001344641.1| RND family efflux transporter MFP subunit [Actinobacillus
           succinogenes 130Z]
 gi|150840735|gb|ABR74706.1| efflux transporter, RND family, MFP subunit [Actinobacillus
           succinogenes 130Z]
          Length = 394

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 60/140 (42%), Gaps = 3/140 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +E SV +SG I    N V++ +  SG I K  V+ G ++ +G  +   +     + +D
Sbjct: 40  GNVEKSVVASGSIE-SSNEVDVGAQVSGKITKLYVKLGQEVKKGDMIADIDSTTQVNNLD 98

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K ++ + +  +  +++A     + Y+ L K ++ +   L +     ++         I
Sbjct: 99  RAKAALASYQAQLKAKQTAYTVAQSSYNRLSKLYKLQSTSLDNVNNAKNAL--DAAKAEI 156

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
            ++  S+K     + +   N
Sbjct: 157 DALKESIKQAEIEVNTAETN 176



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 74/228 (32%), Gaps = 34/228 (14%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---------FANYLKEISR 264
           N+L++ +  +     +L+             N L     L+           N L     
Sbjct: 95  NNLDRAKAALASYQAQLKAKQTAYTVAQSSYNRLSKLYKLQSTSLDNVNNAKNALDAAKA 154

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +++  + +      ++   E       I SPI GT++     S       +Q    IV  
Sbjct: 155 EIDALKESIKQAEIEVNTAETNVGYTKITSPIDGTVISTPI-SEGQTVNANQTTPTIVTV 213

Query: 325 S--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           +  +   I+ +++   I  VK G      F   +D    K+ AII+ +DP  +   +   
Sbjct: 214 ANLEKMLIKPEISEGDITKVKAGQEVE--FTILSDSTT-KYHAIIKSVDPATTTTTDASS 270

Query: 383 TQE--------------YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           T                YY   +++      + +  LR G   E    
Sbjct: 271 TSSASSSSSSSSTTSAIYYYANMEVD-----NTDHILRIGMTTENTIK 313


>gi|237745179|ref|ZP_04575660.1| efflux transporter [Fusobacterium sp. 7_1]
 gi|229432408|gb|EEO42620.1| efflux transporter [Fusobacterium sp. 7_1]
          Length = 389

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 98/282 (34%), Gaps = 25/282 (8%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYR-SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           L + + +   + + V +  + S  R  +  +++   +     L  E K   L A + S  
Sbjct: 35  LTETVKRSDISQTIVASGTVRSNNRVEVGAQVSGKITKINVVLGQEVKKGDLLATIDSLT 94

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++  + +      A S+  + Q +R       ++ ++   + + L  +N +  +      
Sbjct: 95  QNNNLDE------AKSKLKVYQAQRKSASVKYQVAQSKFNRISKLYQMNSISQDDYETAK 148

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             L+     + +     A     +   E      +I SPI G ++     S       +Q
Sbjct: 149 EELEVAKASVTEYDELIAQASISVKTAETNLSYTSITSPIDGVVISIPV-SEGQTVNSNQ 207

Query: 317 PLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               IV  +      I+A+V    I  VKKG    V      D   K     ++ +D   
Sbjct: 208 SAPTIVQVADLSKMLIKAEVAEGDITKVKKGMEVEVATVANPDKTYKS---TVQSVDYAT 264

Query: 375 SQQDNNLQTQE-------YYEVILKITDLAFSDNNIELRNGF 409
           S   +N  ++        YY   + + +    D N+ +  G 
Sbjct: 265 STLTDNEYSESVSNTSAVYYYANIILDN---KDGNLRI--GM 301



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 57/147 (38%), Gaps = 17/147 (11%)

Query: 19  RMTLLSIIGIIGLITWSIL----------------LPIEISVSSSGEILNEDNVVEIKSP 62
           +  +L I+ I+G++ +S                    I  ++ +SG +   +N VE+ + 
Sbjct: 7   KWIILVIVLILGVVYYSFFRKKDDGVKYLTETVKRSDISQTIVASGTVR-SNNRVEVGAQ 65

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I K  V  G ++ +G  L T + +   + +D  K  +K  +    +         +
Sbjct: 66  VSGKITKINVVLGQEVKKGDLLATIDSLTQNNNLDEAKSKLKVYQAQRKSASVKYQVAQS 125

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTC 149
           K++ + K ++       D+        
Sbjct: 126 KFNRISKLYQMNSISQDDYETAKEELE 152


>gi|325660892|ref|ZP_08149520.1| hypothetical protein HMPREF0490_00252 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472966|gb|EGC76176.1| hypothetical protein HMPREF0490_00252 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 518

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 88/278 (31%), Gaps = 12/278 (4%)

Query: 44  VSSSGEILNEDNVVEIKSPFSG-IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V   G+ + E  +  + S   G  ++K     G+ + +G  LL ++     + +D K+  
Sbjct: 53  VVIQGKGIVETRMESLISLEKGLRVEKIL-SAGTVVKKGDVLLQYDKAYLQESVDKKRAE 111

Query: 103 IKNLRCHIDTEK-SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI---- 157
           I+ L   +   + +                    E+      + +S  +  ++ GI    
Sbjct: 112 IQKLELAVQQARITGQPPARAAATDGAARDVQLSEENYARAEEGYSMAATNYDEGILLLQ 171

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            ++ R  +              +LE       A L   Q +    + + +   V    + 
Sbjct: 172 QTLEREKQAAEEEKMGAMKQAQELEQAGKTEEAELLRRQAEEAAQQRIAQAQTVYDGSVQ 231

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQNQRTFA 274
           + E    ++  +L+     +           ++  +  AN  K        ++  Q    
Sbjct: 232 ELEIQKQQALADLQMQESARDQAYNAYESAKEQDAVAAANDQKTAEAGGYTIQSVQVDLD 291

Query: 275 DEMSKLTILEK-TREQKTILSPIAGTIVYNQSFSSSNY 311
               +L  LE+   E   + +   G ++     ++   
Sbjct: 292 MAKKELAKLEQAQAENAEVKASENG-VLRESGVTAGGV 328


>gi|307707947|ref|ZP_07644422.1| transport protein ComB [Streptococcus mitis NCTC 12261]
 gi|307616012|gb|EFN95210.1| transport protein ComB [Streptococcus mitis NCTC 12261]
          Length = 449

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 52/410 (12%), Positives = 138/410 (33%), Gaps = 26/410 (6%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF----EDI 90
           + L   E+S+S+   +     +  I+S  +  I    +E    + +G  L+ +    E +
Sbjct: 38  ATLAEKEMSMSTRATVEPSRILANIQSTSNNRILVNHLEESKLVKKGELLVQYQEGAEGV 97

Query: 91  ETTD------LIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           +         ++  +K  ++ L+  + + E    +     Y    + + S+   L     
Sbjct: 98  QAEAYASQLDMLKDQKKQLEYLQKSLQEGENHFPEEDKFGYQATFRDYISQAGSLRASTS 157

Query: 144 KYHST---CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS--SHQKD 198
           + + T    +   +   + +   +     ++R     +  +E  +SL    L+   +Q  
Sbjct: 158 QQNETIASQNAAASQTQAEIGTLISQTEAKIRDYQTAKSAIETGASLASQNLAYSLYQSY 217

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            +  +   +  A +   L  Q   +  S    R           + + L  +     + +
Sbjct: 218 KSQGEENPQSKAQAVVQLEAQLSQLESSLATYRVQYAGSGTQQAYASGLSSQLESLKSQH 277

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L ++ ++L    +   +  S   +     ++  I +   G +  N   S S    +   L
Sbjct: 278 LAKVGQELTLLDQKILEAESGRKVQGNLLDKGKITASEDGVLHLNPETSDSTMVAEGALL 337

Query: 319 MKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            ++ P         + A ++ K +  +K G +       +    +    + I  ID   +
Sbjct: 338 AQLYPSLEKEGKVKLTAYLSSKDVARIKVGDSVRYT-TTHDAKNQLFLDSTITSIDATAT 396

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           + +    T  ++++  +      S    +LR G    +       +  + 
Sbjct: 397 KTE----TGNFFKIEAETN--LTSKQAAKLRYGVEGRLQMITGRKSYLRY 440


>gi|152999339|ref|YP_001365020.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS185]
 gi|151363957|gb|ABS06957.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS185]
          Length = 416

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 73/240 (30%), Gaps = 35/240 (14%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-- 262
            +K   ++Q D   Q+  +  +   L+    + +     I +   E + +      +   
Sbjct: 89  VKKGDLIAQIDSLAQQNNLKDALASLKSINAQFRAKQAQIRQAKLEFSRQQQMLADKASS 148

Query: 263 --------------SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                           +LEQ +         +           I +P+ GT+VY+     
Sbjct: 149 RADYEVADANLTVYQAELEQLEAQKQQAEINVDSARIDLGYTKITAPMDGTVVYSAV-EV 207

Query: 309 SNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                 +Q    IV         ++A+++   + +V  G      F          ++ I
Sbjct: 208 GQTVNANQTTPTIVEMAQLDTMTVKAQISEADVVNVHPGQAVY--FTVLGKPNHP-YRGI 264

Query: 367 IEKIDP-------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  I+P         S   ++     YY  +  +      + +  LR G  A+V      
Sbjct: 265 LRAIEPGPISMDGDDSNMSSSDSDAIYYHGLFDV-----ENPDRTLRIGMTAQVSIVLAK 319



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G +     +V + +  SG I    +  G ++ +G  +   + +   + +   
Sbjct: 52  IENSVLANGMLQAS-KLVSVGAQVSGQILSLPLALGDEVKKGDLIAQIDSLAQQNNLKDA 110

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             S+K++      +++ +           K   SR++Q+L       +   +V +  ++ 
Sbjct: 111 LASLKSINAQFRAKQAQI--------RQAKLEFSRQQQMLADKASSRADY-EVADANLTV 161

Query: 160 VYRSLKMKLTRMRSIYLN 177
               L+    + +   +N
Sbjct: 162 YQAELEQLEAQKQQAEIN 179


>gi|148555066|ref|YP_001262648.1| RND family efflux transporter MFP subunit [Sphingomonas wittichii
           RW1]
 gi|148500256|gb|ABQ68510.1| efflux transporter, RND family, MFP subunit [Sphingomonas wittichii
           RW1]
          Length = 471

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 80/266 (30%), Gaps = 29/266 (10%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND--LNQQERIVYKSTLELRENI 234
           N++++ ++ S +   +     D      L  K   S+    +NQ +  +  +   +++  
Sbjct: 81  NQVEVGSEQSGIIVEVYVDNNDRVKKGQLLAKLDTSRLQDAVNQADAGLASARAGVQQAE 140

Query: 235 HEQKNMLRHINELYDEANLE------------FANYLKEISRDLEQNQRTFADEMSKLTI 282
             ++     +        L                     +  +   +       + L+ 
Sbjct: 141 ATEQQARATLRRQEQVWRLSGGKVPSATELDVARGDAARATAGVSTAKAAVDQAQATLSS 200

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVPHSKLTYIRAKVTPKQI 339
            +    +  I SP+ G ++  +S            +  L  I    +   +  KV    +
Sbjct: 201 AQTALSKAFIRSPVNGQVLS-RSIEPGQTVAASFNAPVLFTIAEDLRQMRLEVKVDEADV 259

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKID--------PIISQQDNNLQTQEYYEVIL 391
             V+KG  AT     +         A IE++D           S   ++  +     V+ 
Sbjct: 260 GQVQKGQKATFTVDAFPGRTFP---ATIERVDVGANATGTGSSSSSSSSTASTTTSGVVA 316

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTA 417
               L  ++ +  LR G  A      
Sbjct: 317 YTARLTVANGDGLLRPGMTATADIIT 342



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 76/205 (37%), Gaps = 25/205 (12%)

Query: 17  LKRMTLLSIIGIIGLITW---------SILL-------PIEISVSSSGEILNEDNVVEIK 60
            +R+ +   I ++ +I W         +           + + VS++G +   + V E+ 
Sbjct: 28  FRRIGIGLAIVVVLIILWRLILGGDDKAAYATRPVERGDLTVIVSATGNLAPTNQV-EVG 86

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S  SGII +  V+N  ++ +G  L   +     D ++     + + R  +   ++     
Sbjct: 87  SEQSGIIVEVYVDNNDRVKKGQLLAKLDTSRLQDAVNQADAGLASARAGVQQAEA----- 141

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               +   +A   R+EQ+    G    + +++      +   +  +   +          
Sbjct: 142 ---TEQQARATLRRQEQVWRLSGGKVPSATELDVARGDAARATAGVSTAKAAVDQAQATL 198

Query: 181 LENKSSLLRALLSSHQKDLTMMKNL 205
              +++L +A + S      + +++
Sbjct: 199 SSAQTALSKAFIRSPVNGQVLSRSI 223


>gi|222111360|ref|YP_002553624.1| RND family efflux transporter MFP subunit [Acidovorax ebreus TPSY]
 gi|221730804|gb|ACM33624.1| efflux transporter, RND family, MFP subunit [Acidovorax ebreus
           TPSY]
          Length = 537

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 55/305 (18%), Positives = 105/305 (34%), Gaps = 42/305 (13%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             +E  +E+      +   +  K+   G+ +   SL+     +R+      D E ++  +
Sbjct: 82  PVYEGEQEEAETNSNQIRISTEKIQKLGVRTEAVSLRSLDKVVRAAGRIEPD-ERQTFTI 140

Query: 189 RALLSSHQKDLTMM---------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            A    + + L +          + LFE   V   +L   +R    +   +         
Sbjct: 141 AAKFEGYVERLHVNVTGQAVSKGQPLFE---VYSPELVSAQREYAIAAQGVDALKGASGE 197

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
             R + EL D +     N+      D+   Q         L    ++R   T  SP+AG 
Sbjct: 198 AQRGMRELADSSLARLRNW------DISDEQVKA------LAKSGESRRTLTFRSPVAGI 245

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I   ++          + L ++   S +  I A V  + I  VK G  A V+   Y D  
Sbjct: 246 ITDKKAV-QGMRFMPGEMLYQVANLSSVWVI-ADVFEQDIGLVKLGGKAKVQINAYPD-- 301

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            K F+  +  + P +  +           V +++     S+    L+ G  A+V     +
Sbjct: 302 -KMFQGAVSYVYPTLKPETRT--------VQVRVD---LSNTGGLLKPGMFAQVELPTAS 349

Query: 420 T-TLA 423
             T+ 
Sbjct: 350 KGTVL 354



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 45/127 (35%), Gaps = 5/127 (3%)

Query: 40  IEISVSSSGEILNE-DNVVEIKSPFSGIIKKFQVE-NGSQILQGTPLLTF---EDIETTD 94
           ++  V ++G I  +      I + F G +++  V   G  + +G PL      E +    
Sbjct: 120 LDKVVRAAGRIEPDERQTFTIAAKFEGYVERLHVNVTGQAVSKGQPLFEVYSPELVSAQR 179

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
              +    +  L+      +  +  L +      + ++  +EQ+        S  +  F 
Sbjct: 180 EYAIAAQGVDALKGASGEAQRGMRELADSSLARLRNWDISDEQVKALAKSGESRRTLTFR 239

Query: 155 YGISSVY 161
             ++ + 
Sbjct: 240 SPVAGII 246


>gi|254432764|ref|ZP_05046467.1| ABC-transporter membrane fusion protein [Cyanobium sp. PCC 7001]
 gi|197627217|gb|EDY39776.1| ABC-transporter membrane fusion protein [Cyanobium sp. PCC 7001]
          Length = 366

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 90/253 (35%), Gaps = 19/253 (7%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++++    +  QLL  L       + V            ++ + R  +       L  K 
Sbjct: 90  LVDRGDSVQAGQLLAVLDNQPQLDAAVNAARAEVNLARSRLAIARADAGSGEASQL-AKV 148

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             L A   +   +    ++L+   AVS  D + ++  +   T  L+E             
Sbjct: 149 RSLEAQQRTAATEARRYQSLYASGAVSAEDRDNRQLTLDTVTAALQEARALLARQQARST 208

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                 +L           D+E  QR+     + L     +R+   I +PIAGT+   Q 
Sbjct: 209 AGAGGVDL-----------DVEAAQRSLEAAEANLGRAVASRDDNLIRAPIAGTV--LQV 255

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           F+ +  A  +Q ++++    ++  + A+V    +  VK G    +  P          + 
Sbjct: 256 FARAGEAPGAQGILQLGQVGRMQVV-AEVYESDLPRVKPGQPVRITSPALEQ----PLEG 310

Query: 366 IIEKIDPIISQQD 378
            + +I  I+ +Q 
Sbjct: 311 RVGQIGAIVLRQT 323


>gi|74317346|ref|YP_315086.1| secretion protein HlyD [Thiobacillus denitrificans ATCC 25259]
 gi|74056841|gb|AAZ97281.1| Secretion protein HlyD [Thiobacillus denitrificans ATCC 25259]
          Length = 503

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/290 (11%), Positives = 96/290 (33%), Gaps = 19/290 (6%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            +E  E ++     +      ++ + G  +  +S+   +  +R     ++ +  + + + 
Sbjct: 156 GYEQVEARVAMSDQQVQQNKVEILSAG-PARIQSVLELIGEIRFNEDRQVHVVPRLAGVV 214

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             +S++  D      +            + E +  +  L L  +   ++  L       +
Sbjct: 215 ESVSANAGDRVRKGQVLAVIFSPALADQRSELLAAQKRLTLARSTFTREKKLWEDKISPE 274

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +  L+    ++E     +  ++  A    +L        +  I +PI G ++  +  S  
Sbjct: 275 QDYLQAQAAMQEAEIAAQNARQKLASIGGELRG-SGNLTRYEIRAPIGGVVIEKKV-SLG 332

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              ++   +  +V      +    +  K +  VK G  ATV+   +      +   +I  
Sbjct: 333 ETVKEDATIF-VVADLSTVWAEMTIYAKDLNTVKVGQKATVKATAFES----ESSGVISY 387

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  ++ +Q          +  + +      +     R G P  +   +  
Sbjct: 388 VGALVGEQTRTA------KARVVLP-----NPQGVWRPGLPVSIRVVSGE 426



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/138 (10%), Positives = 45/138 (32%), Gaps = 13/138 (9%)

Query: 35  SILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +    I+  +   GEI   ++    +    +G+++      G ++ +G  L         
Sbjct: 181 AGPARIQSVLELIGEIRFNEDRQVHVVPRLAGVVESVSANAGDRVRKGQVLAVI------ 234

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF-LGKYHSTCSKV 152
                   ++ + R  +   +  L    + +   +K +E +     D+   +     +++
Sbjct: 235 -----FSPALADQRSELLAAQKRLTLARSTFTREKKLWEDKISPEQDYLQAQAAMQEAEI 289

Query: 153 FNYGISSVYRSLKMKLTR 170
                     S+  +L  
Sbjct: 290 AAQNARQKLASIGGELRG 307


>gi|146342764|ref|YP_001207812.1| putative efflux transporter [Bradyrhizobium sp. ORS278]
 gi|146195570|emb|CAL79597.1| Putative efflux transporter [Bradyrhizobium sp. ORS278]
          Length = 431

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 71/206 (34%), Gaps = 27/206 (13%)

Query: 19  RMTLLSIIGIIGLITWSIL---------------LPIEISVSSSGEILNEDNVVEIKSPF 63
           R  +L++I ++GL  W  +                 +  +V +SG +      VEI S  
Sbjct: 37  RWFILAVILLLGLGGWQSVRVMLGPAVVVDQVRSGDLVETVVASGHVETP-FRVEIGSQI 95

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           +G + +  V  G ++ +G PL++ E  E    +   +  +      +  + + L   + K
Sbjct: 96  TGTVDEVLVLEGQRVTRGQPLISLESRELKAAVVQAQGQVAQAEARM-RQLAELTLPSAK 154

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN------ 177
             + +        Q         +         +    ++L + L + R+          
Sbjct: 155 EALRQAQATLLNAQQTYDRTSLLTANGYATRASLDEAQKTLDIALAQERAAEFQVFTASP 214

Query: 178 ----RLDLENKSSLLRALLSSHQKDL 199
                +  E + +  RA L + Q  L
Sbjct: 215 GGSDYVMAETQLNQARATLDTAQSRL 240



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 84/287 (29%), Gaps = 36/287 (12%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI-YLNRLDLENKSSLLRALLS 193
           E Q +       S  S+     +      +     RMR +  L     +      +A L 
Sbjct: 106 EGQRVTRGQPLISLESRELKAAVVQAQGQVAQAEARMRQLAELTLPSAKEALRQAQATLL 165

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + Q+       L      ++  L++ ++ +                    I    + A  
Sbjct: 166 NAQQTYDRTSLLTANGYATRASLDEAQKTLD-------------------IALAQERAAE 206

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                      D    +       + L   +      TI +P  G ++  ++      AQ
Sbjct: 207 FQVFTASPGGSDYVMAETQLNQARATLDTAQSRLGYATISAPRDG-VLITRNVEKGTVAQ 265

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             + L+ + P   +  +  ++  + +  +  G TA      Y D R     A++  I+P 
Sbjct: 266 PGKALLVLAPAGDVQLV-LQIDERNLGKLALGQTALASADAYPDKRFP---AVLSYINPG 321

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +     ++Q     ++I+K        +           V     + 
Sbjct: 322 VDLSRASVQV----KLIVKDPPDYLRQD-------MTVSVDIEVASR 357


>gi|84385150|ref|ZP_00988182.1| hypothetical secretion protein [Vibrio splendidus 12B01]
 gi|84379747|gb|EAP96598.1| hypothetical secretion protein [Vibrio splendidus 12B01]
          Length = 373

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 78/250 (31%), Gaps = 24/250 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +  QL++   K        +   +    ++L++    + +   +    + K +       
Sbjct: 79  QPNQLVNQGDKLAILDESDYKIAVQQAEQNLEIAGQNVGAQTASIASAQAKLTSAIVERQ 138

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + +     +  + +K  VS++D ++    +  S   +     + +   + + +   E + 
Sbjct: 139 NTKLQAKRVLEMADKGVVSKSDADKARAALATSRAAVVNAEADLEGAKQQMGKEGQENSQ 198

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A  L                    L   +   E+  I +P  G +  N S S   YA 
Sbjct: 199 VKAALLA-------------------LEQAQLNLERTVITAPTQGGV-SNFSLSEGFYAS 238

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q +M  V      +I A      + +V  G    V          K  K  +  ID  
Sbjct: 239 AGQAIMTFVSTED-IWIEAYYRENSLGNVTVGDEVEV---ALDFAPGKVVKGRVSSIDWG 294

Query: 374 ISQQDNNLQT 383
           +    N+   
Sbjct: 295 VDWGQNDQAG 304



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 71/204 (34%), Gaps = 10/204 (4%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             + N    ++++T   ++ +  ++ +S++   +  +  +     +  +V IK   SG +
Sbjct: 16  GQQENGNDKVRKVTNYLLLFVAFMLIFSVIS--DRIIPITDNARVKGYIVPIKPEVSGKV 73

Query: 68  KKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
               V+    + QG  L   ++        +    +++   ++      I + ++ L   
Sbjct: 74  LDILVQPNQLVNQGDKLAILDESDYKIAVQQAEQNLEIAGQNVGAQTASIASAQAKLTSA 133

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +     K    R  ++ D      S   K      +S    +  +     +      +
Sbjct: 134 IVERQNT-KLQAKRVLEMADKGVVSKSDADKARAALATSRAAVVNAEADLEGAKQQMGKE 192

Query: 181 LENKSSLLRALLSSHQKDLTMMKN 204
            +  S +  ALL+  Q  L + + 
Sbjct: 193 GQENSQVKAALLALEQAQLNLERT 216


>gi|270159781|ref|ZP_06188437.1| putative membrane fusion protein [Legionella longbeachae D-4968]
 gi|289165451|ref|YP_003455589.1| RND efflux membrane fusion proteins [Legionella longbeachae NSW150]
 gi|269988120|gb|EEZ94375.1| putative membrane fusion protein [Legionella longbeachae D-4968]
 gi|288858624|emb|CBJ12514.1| putative RND efflux membrane fusion proteins [Legionella
           longbeachae NSW150]
          Length = 328

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 79/226 (34%), Gaps = 14/226 (6%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L +K    + +  +Q  +  K+ LE ++ +++Q    +   EL      ++ + L + +
Sbjct: 100 ELEKKAIALRIEAAEQSIVAGKANLERQKRLYQQGINSKRQFELAQIEYSKYQSELAQAN 159

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            D+       A + ++L           I + +AG I    +   S   +    L +I+P
Sbjct: 160 IDMVDVDVRIARQQTQL-----------IKAHVAGVIFKRLTGQESVVVKAGDVLAQIIP 208

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI-IEKIDPIISQQDNNLQ 382
            ++   +   +    I  V+    A ++F  +  I+ + +  I +      +S  D    
Sbjct: 209 ETQSRAVELWIDGNDIPFVRLHQKARLQFEGWPAIQFRGWPEIAVGTFGGTVSFIDPTDN 268

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
               +  ++   +         LR G             L  E+  
Sbjct: 269 GLGLFRAVIVPDEP--WPQTRFLRQGVRVHGWIQLGEVPLWYELWR 312



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 67/173 (38%), Gaps = 13/173 (7%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQ 71
           A +  +  L I+  +    W             G+++     + +  + SP +G IKK+ 
Sbjct: 19  AKIIFIITLVIVLFLSFTPWQQFA------LGDGKVIAYSPTERLHTLNSPINGRIKKWY 72

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G ++  G  L+   D +   L+   ++  K +   I+  + ++       +  ++ +
Sbjct: 73  VDEGMKVKPGDLLVEINDNDPG-LLKRLELEKKAIALRIEAAEQSIVAGKANLERQKRLY 131

Query: 132 E---SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           +   + + Q      +Y    S++    I  V   +++   + + I  +   +
Sbjct: 132 QQGINSKRQFELAQIEYSKYQSELAQANIDMVDVDVRIARQQTQLIKAHVAGV 184


>gi|123968847|ref|YP_001009705.1| membrane fusion protein [Prochlorococcus marinus str. AS9601]
 gi|123198957|gb|ABM70598.1| possible membrane fusion protein [Prochlorococcus marinus str.
           AS9601]
          Length = 353

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 60/300 (20%), Positives = 110/300 (36%), Gaps = 35/300 (11%)

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +D+++K    R   +L  L  +    S  F    S       +++   + I  + ++   
Sbjct: 2   FDLIKKNINLRSGIILLSLAIFFVFISNSFKKNKSKDISDFVVQVE--KGILSDSINTSG 59

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQ---ERIVYKSTLELRENIHEQKN 239
           +   +R      +K   + + + ++   V ++ +      E  +YK   EL  N+ +QK+
Sbjct: 60  EVKAIRTSNIGPRKQGVIKEIIVDEGDLVKKDQVLASLDDEDFIYKIE-ELELNVEKQKS 118

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                  LY E  +   +Y           +  F    +KL   +  +    I +P  G 
Sbjct: 119 EFLRREYLYQEGAVSKEDYESY--------KNNFNISSAKLNDAKAEKSFYLIKAPYGGK 170

Query: 300 IVYNQSFSSSNYAQQSQPLMK-------IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           I   +     +Y   S  L         I   S+   I AKV    I  +K G  A+VR 
Sbjct: 171 ITA-KYAEIGSYVTPSTNLSSDPKTKNFIFELSEGLEIVAKVPESDIGRIKIGQEASVRI 229

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             Y   +     AI++KI     + +N       +EV L      F D + E++ G  A+
Sbjct: 230 EAYPSKKY---SAIVKKIATRAVKDNNVTS----FEVTLN-----FKDISEEIKIGMTAD 277



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 64/163 (39%), Gaps = 22/163 (13%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSI-----------LLPIEISVSSSGEILNE 53
           M+  +K+N       + LLS+      I+ S            ++ +E  + S   I   
Sbjct: 1   MFDLIKKNINLRSG-IILLSLAIFFVFISNSFKKNKSKDISDFVVQVEKGILSD-SINTS 58

Query: 54  DNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
             V  I+         G+IK+  V+ G  + +   L + +D +    I+  +++++  + 
Sbjct: 59  GEVKAIRTSNIGPRKQGVIKEIIVDEGDLVKKDQVLASLDDEDFIYKIEELELNVEKQK- 117

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              +E    ++L  +  V ++ +ES +        K +   ++
Sbjct: 118 ---SEFLRREYLYQEGAVSKEDYESYKNNFNISSAKLNDAKAE 157


>gi|152986509|ref|YP_001347203.1| hypothetical protein PSPA7_1821 [Pseudomonas aeruginosa PA7]
 gi|150961667|gb|ABR83692.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 285

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 75/224 (33%), Gaps = 30/224 (13%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF------ANYLKEISRDLEQN 269
           L + ++  Y++ LE    + E ++    + +               A   +    +    
Sbjct: 71  LMRIDQERYQANLEQARAVAETRHQQYLLRQNEAARRSRLGIGAISAEDKENAQINAAIA 130

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +  + + ++++ I E   ++  + +   G +   +  +  NYA   Q +M +V   +  Y
Sbjct: 131 RSEYQEALAQVKIAELNLKRSELRAARNGQVTNLRL-AQGNYATAGQAVMALV-DQQSFY 188

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----- 384
           + A     ++  ++ G  A VR               +E I   I+ +++    Q     
Sbjct: 189 VVAYFEETKLPGIRVGMRAQVRLMSGDQ----PIAGTVESISSGITDRNSTPDGQLLANV 244

Query: 385 ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                     +   V +++  +      + L  G  A V     
Sbjct: 245 EPTFNWVRLAQRIPVRIRLDQV---PAGVHLSAGMTASVTVQGD 285



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 54/185 (29%), Gaps = 8/185 (4%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN------LRCHIDTEKSAL 117
           SG +   QV++   +  G  L+  +       ++  +   +       LR +    +S L
Sbjct: 51  SGWVTDLQVKDNQVVKVGDVLMRIDQERYQANLEQARAVAETRHQQYLLRQNEAARRSRL 110

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                  +  E A  +      ++            N   S +  +   ++T +R    N
Sbjct: 111 GIGAISAEDKENAQINAAIARSEYQEALAQVKIAELNLKRSELRAARNGQVTNLRLAQGN 170

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNL--FEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                     L    S +         L        +Q  L   ++ +  +   +   I 
Sbjct: 171 YATAGQAVMALVDQQSFYVVAYFEETKLPGIRVGMRAQVRLMSGDQPIAGTVESISSGIT 230

Query: 236 EQKNM 240
           ++ + 
Sbjct: 231 DRNST 235


>gi|306838418|ref|ZP_07471263.1| HlyD family protein secretion protein [Brucella sp. NF 2653]
 gi|306406558|gb|EFM62792.1| HlyD family protein secretion protein [Brucella sp. NF 2653]
          Length = 319

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 40  LFEIDPQPFQIELDQAKANLAQASEKLAGLALTYKQQLASVAQAKDDVTFAQEQFDRVSA 99

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 100 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 155

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 156 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFFAVGDPAFTLI-- 202

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 203 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITP 247



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/183 (9%), Positives = 51/183 (27%), Gaps = 10/183 (5%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    SG + +  V+    + +G  L   +       +D  K ++      +    + L 
Sbjct: 15  ITPQVSGQVIRVAVDPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKL----AGLA 70

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               +        +       +   +  +     F            +++ +        
Sbjct: 71  LTYKQQLASVAQAKDDVTFAQEQFDRVSALVHDKFEARAQFDQAERALQVAKQEQNAAAS 130

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
                 + L   L    Q+  +    L  K   ++ +L ++   + +        + + +
Sbjct: 131 AAAATLAQLGGTLDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPFAGTVTQVE 184

Query: 239 NML 241
           N+ 
Sbjct: 185 NIQ 187


>gi|121593869|ref|YP_985765.1| RND family efflux transporter MFP subunit [Acidovorax sp. JS42]
 gi|120605949|gb|ABM41689.1| efflux transporter, RND family, MFP subunit [Acidovorax sp. JS42]
          Length = 537

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 100/301 (33%), Gaps = 41/301 (13%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             +E  +E+      +   +  K+   G+ +   SL+     +R+      D E ++  +
Sbjct: 82  AVYEGEQEEAETNSNQIRISTEKIQKLGVRTEAVSLRSLDKVVRAAGRIEPD-ERQTFTI 140

Query: 189 RALLSSHQKDLTMM---------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            A    + + L            + LFE   V   +L   +R    +   +         
Sbjct: 141 AAKFEGYVERLHANVTGQAVSKGQPLFE---VYSPELVSAQREYAIAAQGVDALKDASGE 197

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
             R + EL D +     N+      D+   Q         L      R   T  SP+AG 
Sbjct: 198 TQRDMRELADSSLARLRNW------DISDEQVKT------LAKSGDARRTLTFRSPVAGI 245

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I   ++          + L ++   S +  I A V  + I  VK G  A V+   Y D  
Sbjct: 246 ITDKKAI-QGMRFMPGEMLYQVANLSSVWVI-ADVFEQDIGLVKSGGKAKVQINAYPD-- 301

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            K F+  +  + P +  +           V +++     S+    L+ G  A+V     +
Sbjct: 302 -KVFQGTVSYVYPTLKPETRT--------VQVRVD---LSNTGGLLKPGMFAQVELPTAS 349

Query: 420 T 420
            
Sbjct: 350 K 350



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 66/185 (35%), Gaps = 12/185 (6%)

Query: 40  IEISVSSSGEILNE-DNVVEIKSPFSGIIKKFQVE-NGSQILQGTPLLTF---EDIETTD 94
           ++  V ++G I  +      I + F G +++      G  + +G PL      E +    
Sbjct: 120 LDKVVRAAGRIEPDERQTFTIAAKFEGYVERLHANVTGQAVSKGQPLFEVYSPELVSAQR 179

Query: 95  LIDLKKVSIKNLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              +    +  L+    +T++   +  ++    L   ++  +EQ+        +  +  F
Sbjct: 180 EYAIAAQGVDALKDASGETQRDMRELADSSLARLRN-WDISDEQVKTLAKSGDARRTLTF 238

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              ++ +    K  +  MR +    L      S +  +    ++D+     L +    ++
Sbjct: 239 RSPVAGIITD-KKAIQGMRFMPGEMLYQVANLSSVWVIADVFEQDIG----LVKSGGKAK 293

Query: 214 NDLNQ 218
             +N 
Sbjct: 294 VQINA 298


>gi|49476184|ref|YP_034225.1| transport protein transmembrane [Bartonella henselae str.
           Houston-1]
 gi|49238992|emb|CAF28292.1| Transport protein transmembrane [Bartonella henselae str.
           Houston-1]
          Length = 334

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 72/199 (36%), Gaps = 6/199 (3%)

Query: 16  SLKRMTLLSIIGIIG--LITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
             +   +    GI G  LI W+  L P   ++  +     + N+  + S  SG+I +  V
Sbjct: 6   RSRATIIAFFSGITGCLLILWAWKLPPFVSAIQITDNASVKGNMTLVSSQISGVIARIYV 65

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           ++  ++ QG  L   +D      +   +  + +    + +       L  + +  E    
Sbjct: 66  QDYQRVEQGMLLFELDDSLFRQQLARAQAVLDSKNAKLASVVLQAQLLQGEINTAEAELT 125

Query: 133 SREE---QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                   + +         +   +  +S +  +L+ K    + + L R  L+++ +  +
Sbjct: 126 RSRAFSNVIPENKKLGFGDGASSVSRPLSQLLAALETKRQLQKQLDLERQSLQSEVAGAK 185

Query: 190 ALLSSHQKDLTMMKNLFEK 208
             +   + +L   K L  K
Sbjct: 186 VGVELAKLNLKHTKILSPK 204



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/315 (12%), Positives = 94/315 (29%), Gaps = 38/315 (12%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K  +  ++++   +      ++ Q ++           +F   ++     L  K  ++ S
Sbjct: 46  KGNMTLVSSQISGVIARIYVQDYQRVEQGMLLFELDDSLFRQQLARAQAVLDSKNAKLAS 105

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           + L    L+ + +   A L          ++    N + +N               +   
Sbjct: 106 VVLQAQLLQGEINTAEAEL---------TRSRAFSNVIPENKKLG----FGDGASSVSRP 152

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           + +    L    +L  + +LE  +   E++            E++KL       +   IL
Sbjct: 153 LSQLLAALETKRQLQKQLDLERQSLQSEVAG------AKVGVELAKLN-----LKHTKIL 201

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP  G +          Y      L+ ++  S   +I A     Q+  ++ G        
Sbjct: 202 SPKTGHV-GLVGARVGQYVLPGTQLVSLI--SDDIWIIANYKETQLSQMRVGQPVVFSVD 258

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY--------EVILKITDLAFSDNNIEL 405
              + +       + +  P    + + L+T             + ++I+     +   +L
Sbjct: 259 ALNNQK---LTGRVVRFAPATGSEFSLLKTDTAIGNFIKIAQRISVRISLDPGQEGVEKL 315

Query: 406 RNGFPAEVLFTAKNT 420
             G            
Sbjct: 316 IPGMSVVTYVDTSQR 330


>gi|237666998|ref|ZP_04526982.1| secretion protein HlyD [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|237655346|gb|EEP52902.1| secretion protein HlyD [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 209

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 54/153 (35%), Gaps = 11/153 (7%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
              D + K  +L + +    I SPI GTIV N     +     + PL  IV  +   Y+ 
Sbjct: 62  DVGDVVKKDQVLGRQQVLPYITSPINGTIVKNDVV-KNETVSAATPLA-IVADTDNMYVG 119

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             +    I+ +  G    +    Y D   K FK  + +ID       +   +        
Sbjct: 120 VNIEETDIRKILVGQDVKITLDAYPD---KTFKGKVTEIDNTTQTYFSGTSSLSTSGTYT 176

Query: 392 KITDLAFSD------NNIELRNGFPAEVLFTAK 418
           K+T L          +N+ L  G  A V    K
Sbjct: 177 KVTQLVPVKVSIENNDNLPLTLGMNAIVKIKLK 209


>gi|304398697|ref|ZP_07380569.1| efflux pump membrane protein [Pantoea sp. aB]
 gi|304353908|gb|EFM18283.1| efflux pump membrane protein [Pantoea sp. aB]
          Length = 390

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 82/260 (31%), Gaps = 28/260 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +   +L +  L+  Q DL   + L   N + +
Sbjct: 98  EQAFEKAQTALATSVRQTHQLMINGKQYQASITLQQTALAQAQADLKRREPLGVANLIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +  +L   I +       I     E                  NQ   
Sbjct: 158 EELQHARDAVATAKAQLDVAIQQYNANQAMILNTSLE------------------NQPAV 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L       ++  I SP+ G +   +S    +    S PL+ +VP +   ++ A 
Sbjct: 200 QQSAAELRDAWLALQRTEIRSPMDGFVSR-RSVQVGSQISTSTPLLAVVPATN-LWVDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----E 385
               Q+  V+ G  ATV    Y D  +   K   + +            N         +
Sbjct: 258 FKETQLAGVRIGQPATVVADIYGDDVVYHGKVAGLDMGTGSAFSLLPAQNATGNWIKVVQ 317

Query: 386 YYEVILKITDLAFSDNNIEL 405
              V +++     + + + +
Sbjct: 318 RLPVRIELNQEDIARHPLRI 337



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/215 (10%), Positives = 69/215 (32%), Gaps = 25/215 (11%)

Query: 20  MTLLSIIGIIGLITWSI--------LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + +L++I ++  I W +            + +  +        N V++ +  SG + K  
Sbjct: 24  LIVLALIFVLIGIAWGVYWFLVLRHFQETDDAYVA-------GNQVQVMAQVSGSVNKVW 76

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-------NLRCHIDTEKSALDFLNNKY 124
            E+   + +G  L++ +  +     +  + ++         L  +    ++++       
Sbjct: 77  FEDTDFVKKGDVLVSLDKTDAEQAFEKAQTALATSVRQTHQLMINGKQYQASITLQQTAL 136

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   + RE   +  L               +     + ++        +    LEN+
Sbjct: 137 AQAQADLKRREPLGVANLIGREELQHARDAVATAKAQLDVAIQQYNANQAMILNTSLENQ 196

Query: 185 SSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
            ++ ++        L + +          VS+  +
Sbjct: 197 PAVQQSAAELRDAWLALQRTEIRSPMDGFVSRRSV 231


>gi|262393366|ref|YP_003285220.1| membrane-fusion protein [Vibrio sp. Ex25]
 gi|262336960|gb|ACY50755.1| membrane-fusion protein [Vibrio sp. Ex25]
          Length = 372

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 60/183 (32%), Gaps = 18/183 (9%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +   +  + E    A     +   +        Q    D  + L+ ++       + +P 
Sbjct: 123 RAQAMLLVKEKEFNAAKSLKSRGLQGEVAFATAQAALVDARANLSNVQTALRNTEVKAPF 182

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G IV +      ++     P+  ++       I A V+ + IQ++K+G  A VR     
Sbjct: 183 DG-IVDHHFVELGDFVGIGDPIATVI-DLDTLVIEADVSERHIQYLKEGLEADVR----- 235

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            I ++  +  +  I  + S   N               ++   + +  +  G  AEV   
Sbjct: 236 TINQQHHQGHVRYIGRVSSASTNTF-----------PIEIEIDNQDARIPAGMSAEVQLP 284

Query: 417 AKN 419
              
Sbjct: 285 LSK 287


>gi|91783897|ref|YP_559103.1| multidrug ABC transporter membrane-binding protein [Burkholderia
           xenovorans LB400]
 gi|91687851|gb|ABE31051.1| ABC multidrug efflux pump, membrane fusion protein, HlyD subfamily
           [Burkholderia xenovorans LB400]
          Length = 337

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 86/255 (33%), Gaps = 29/255 (11%)

Query: 173 SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLEL 230
            +Y  + ++      +  A +S+++  L   +N    N VS Q DL++++  + ++   +
Sbjct: 93  RLYRQQTEIDRTNLQVATAQISANESTLAAARN----NVVSDQFDLSEKQLDLGRAENLV 148

Query: 231 REN-IHEQKNMLRHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTRE 288
           + N I  Q   L    E    A L     L E++ + +   +   A   +KL + E    
Sbjct: 149 KGNAIARQTRDLAFTAERQSAATLAHDKALVEVASNNIALARANQAAADAKLKLDEVMLS 208

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY---IRAKVTPKQIQHVKKG 345
              + +P  G I   +       A     +  +           +RA V    I  V+  
Sbjct: 209 YTVLRAPFDGVI-AVREAELGQLAGSGVAIFTL----DELDHVWLRAYVNEPDIGKVRLN 263

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSD 400
              TV    Y           I  I P        ++T        Y V + I +     
Sbjct: 264 EAVTVTTDTYPGKTY---HGRISFISPQAEFTPKTVETHAERVTLVYRVRIDIDNPT--- 317

Query: 401 NNIELRNGFPAEVLF 415
              EL  G PA+   
Sbjct: 318 --HELLPGMPADASI 330


>gi|317490897|ref|ZP_07949333.1| efflux pump membrane protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920444|gb|EFV41767.1| efflux pump membrane protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 391

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 81/262 (30%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +    L +  L+    D    + L   NA+ +
Sbjct: 99  EQAYEKAKTALANSVRQTHQLIINGKQYQANIQLRKTELNKATDDYKRRQVLGSVNAIGR 158

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L   +  V  +   L   I +       I     E          ++           
Sbjct: 159 EELQHAQDAVESAKAALDVAIQQYNANQALILNTPLEKQPAIQQAAAQVRDAWL------ 212

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         E+  I SPI G +   +S         S PLM +VP     +I A 
Sbjct: 213 ------------ALERTQIRSPITGYVSR-RSVQVGAQITPSTPLMAVVP-DNQLWIDAN 258

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+  ++ G  ATV    Y D     +K  +  +D          P  +   N ++ 
Sbjct: 259 FKETQLAGMRIGQPATVISDMYGDDV--VYKGKVVGLDMGTGSAFSLLPAQNATGNWIKV 316

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++     +++ + +
Sbjct: 317 VQRLPVRIELDAKQIAEHPLRI 338



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 62/175 (35%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-- 109
              N V+I +  SG + K   +    +  G  L+T +  +     +  K ++ N      
Sbjct: 58  VTGNQVQINAQVSGSVTKVYFDGTDLVKAGDILVTLDRTDAEQAYEKAKTALANSVRQTH 117

Query: 110 ---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              I+ ++   +    K ++ +   + +  Q+L  +        +     + S   +L +
Sbjct: 118 QLIINGKQYQANIQLRKTELNKATDDYKRRQVLGSVNAIGREELQHAQDAVESAKAALDV 177

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
            + +  +     L+  LE + ++ +A        L + +          VS+  +
Sbjct: 178 AIQQYNANQALILNTPLEKQPAIQQAAAQVRDAWLALERTQIRSPITGYVSRRSV 232


>gi|116626861|ref|YP_829017.1| RND family efflux transporter MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116230023|gb|ABJ88732.1| efflux transporter, RND family, MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 430

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 57/196 (29%), Gaps = 23/196 (11%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM--RSIYLNRLDLENKSSLLRAL 191
           R  Q +      +    + F   +     +L+     +      ++    E   +  ++ 
Sbjct: 79  RPGQEVSAGQALYVLDLRPFQAQLQQAQGTLRQTEADLSFAQRQVSLRQAEANLAASQSN 138

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L   Q+D   +K L E+NA ++ DL+                       LR         
Sbjct: 139 LVKAQQDYERLKPLVEQNAAAKQDLD------------------AAVAALRSAEASVTAN 180

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                         ++  +     +   L       +  TI +PI+G I  +        
Sbjct: 181 QANVEQTRLSTETQVQSTEGKVQAQRGALETASLNVQYGTIRAPISGRI-GDTLVPVGGL 239

Query: 312 AQQ--SQPLMKIVPHS 325
                +QPL  IVP  
Sbjct: 240 VNPNATQPLTTIVPLD 255



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 14/143 (9%), Positives = 44/143 (30%), Gaps = 3/143 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+K+    G ++  G  L   +       +   + +++     +   +  +     + 
Sbjct: 71  GYIEKWLFRPGQEVSAGQALYVLDLRPFQAQLQQAQGTLRQTEADLSFAQRQVSLRQAEA 130

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++        + Q      K     +      + +   +L+       S+  N+ ++E  
Sbjct: 131 NLAASQSNLVKAQQDYERLKPLVEQNAAAKQDLDAAVAALRSAEA---SVTANQANVEQT 187

Query: 185 SSLLRALLSSHQKDLTMMKNLFE 207
                  + S +  +   +   E
Sbjct: 188 RLSTETQVQSTEGKVQAQRGALE 210


>gi|316935183|ref|YP_004110165.1| RND family efflux transporter MFP subunit [Rhodopseudomonas
           palustris DX-1]
 gi|315602897|gb|ADU45432.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
           palustris DX-1]
          Length = 420

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 96/285 (33%), Gaps = 28/285 (9%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              S++       + +  +      + + +   +L+         ++  Q  +  ++ L 
Sbjct: 80  EIASQITGTVKDVLVKEGQQVHQGQQLVAIEASELQAWVVQAEGAVAQAQARVRQLRELT 139

Query: 207 EKNAV-----SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +  A      +Q +L   E I  +++ +L  + +  K  L    +  D A  +      +
Sbjct: 140 KPAADEALKQAQANLLNAEAIYERAS-KLAASGYGTKATLDDATKNLDVARTQVRTAELQ 198

Query: 262 I------SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           +        D    +   +  ++ L   +      TI++P  G ++  ++       Q  
Sbjct: 199 VFTSSPGGSDFVMAETQLSQALANLNTAQARLGYATIVAPRDG-VLITRAVERGTVVQPG 257

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + L+ + P   +  +  ++  K +  +  G  A      Y D   K+F A +  I+P + 
Sbjct: 258 KALLVLAPAGDIQIV-VQIDEKNLGQLALGQHALASADAYPD---KRFDATLSYINPSVD 313

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               ++      E+ LK+ D         LR      V       
Sbjct: 314 INRASV------EIKLKVDDPPDY-----LRQDMTVSVDIATARR 347



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 54/140 (38%), Gaps = 2/140 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  +V +SG I      VEI S  +G +K   V+ G Q+ QG  L+  E  E    + 
Sbjct: 61  GNLVQTVVASGHIETP-YRVEIASQITGTVKDVLVKEGQQVHQGQQLVAIEASELQAWVV 119

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   +  +   +       ++     +A     E + +   K  ++        +
Sbjct: 120 QAEGAVAQAQARVRQLRELTKPAADEALKQAQANLLNAEAIYERASKLAASGYGT-KATL 178

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
               ++L +  T++R+  L 
Sbjct: 179 DDATKNLDVARTQVRTAELQ 198


>gi|237654180|ref|YP_002890494.1| efflux transporter RND family, MFP subunit [Thauera sp. MZ1T]
 gi|237625427|gb|ACR02117.1| efflux transporter, RND family, MFP subunit [Thauera sp. MZ1T]
          Length = 438

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 6/138 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E  V+++G +   D V ++ +  SG ++K  VE G  +  G  L   +       +D  
Sbjct: 58  VEDVVTATGTLQPRDYV-DVGAQVSGQLRKIHVEVGDTVEAGQLLAEIDPTVYRARVDAS 116

Query: 100 KVSIKNLRCHIDTEKSALDFL-----NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           +  +KNLR  +   ++ L          +  + E A      Q  +          +   
Sbjct: 117 RAQLKNLRAQLKDREAQLALAQIQQRRQRALMAEDATTKESLQTAEASAMSAEAQLEALR 176

Query: 155 YGISSVYRSLKMKLTRMR 172
             I  +  +L+     ++
Sbjct: 177 AQIEQIESTLRADEANLQ 194



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 72/211 (34%), Gaps = 19/211 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE--LYDEANLEFANYLKEISRDLEQ 268
            S+  L      +     +L     +Q+     + E     E+              LE 
Sbjct: 115 ASRAQLKNLRAQLKDREAQLALAQIQQRRQRALMAEDATTKESLQTAEASAMSAEAQLEA 174

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP---LMKIVPHS 325
            +       S L   E   +   ILSP+AGT+V   +         +Q    +M+I    
Sbjct: 175 LRAQIEQIESTLRADEANLQYARILSPMAGTVVSITAR-QGQTLNTNQQAPVVMRIA-DL 232

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               ++ +V+   I  +K G  A   F        K+++  +EKI+P  +  +N +    
Sbjct: 233 STMTVQTQVSEADIGRLKLGMEAY--FTTLGGS-GKRWQGKLEKIEPTPTVTNNVVLYNA 289

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            ++V          + +  L     A+V F 
Sbjct: 290 LFDV---------LNPDGRLMTQMTAQVFFV 311


>gi|218676836|ref|YP_002395655.1| putative secretion protein [Vibrio splendidus LGP32]
 gi|218325104|emb|CAV26952.1| putative secretion protein [Vibrio splendidus LGP32]
          Length = 373

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 78/250 (31%), Gaps = 24/250 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +  QL++   K        +   +    ++L++    + +   +    + K +       
Sbjct: 79  QPNQLVNQGDKLAILDESDYKIAVQQAEQNLEIAGQNVGAQTASIASAQAKLTSAIVERQ 138

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + +     +  + +K  VS++D ++    +  S   +     +     + + +   E + 
Sbjct: 139 NTKLQAKRVLEMADKGVVSKSDADKARAALATSRAAVVNAEADLDRAKKQMGKEGQENSQ 198

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A  L                    L   +   E+  I +P  G +  N S S   YA 
Sbjct: 199 VKAALLA-------------------LEQAQLNLERTVITAPTQGGV-SNFSLSEGFYAS 238

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             QP+M  V      +I A      + +V  G    V          +  K  +  ID  
Sbjct: 239 AGQPIMTFVSTED-IWIEAYYRENSLGNVTVGDEVEV---ALDFAPGQIVKGRVSSIDWG 294

Query: 374 ISQQDNNLQT 383
           +    N+   
Sbjct: 295 VDWGQNDQAG 304



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 70/195 (35%), Gaps = 10/195 (5%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++++T   ++ +  ++ +S++   +  +  +     +  +V IK   SG +    V+   
Sbjct: 25  VRKVTNYLLLFVAFMLIFSVIS--DRIIPITDNARVKGYIVPIKPEVSGKVLDILVQPNQ 82

Query: 77  QILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            + QG  L   ++        +    +++   ++      I + ++ L     +     K
Sbjct: 83  LVNQGDKLAILDESDYKIAVQQAEQNLEIAGQNVGAQTASIASAQAKLTSAIVERQNT-K 141

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               R  ++ D      S   K      +S    +  +    R+      + +  S +  
Sbjct: 142 LQAKRVLEMADKGVVSKSDADKARAALATSRAAVVNAEADLDRAKKQMGKEGQENSQVKA 201

Query: 190 ALLSSHQKDLTMMKN 204
           ALL+  Q  L + + 
Sbjct: 202 ALLALEQAQLNLERT 216


>gi|146342983|ref|YP_001208031.1| HlyD family secretion protein [Bradyrhizobium sp. ORS278]
 gi|146195789|emb|CAL79816.1| Putative HlyD family secretion protein [Bradyrhizobium sp. ORS278]
          Length = 376

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 44/333 (13%), Positives = 94/333 (28%), Gaps = 28/333 (8%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           T     +  +   +R  +    S +     K  V +       + L+      +      
Sbjct: 56  TGNATTQSTNDAYVRADLTQLSSRVAGEVLKVAVSDFQQVKAGDILIQIDPADYEAQVAQ 115

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               +++   +L     ++   Y      E +     A     +++    ++L +  A +
Sbjct: 116 AEANVAAAQAALDNLGNQIELQYATIAQAEAQQVSAGAAEVQARQEEERQQSLSQTEAGT 175

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L Q      K+  ++R +          +  L        A+     +         
Sbjct: 176 RQRLEQATAAYAKAQADVRASRAVIAAQRHQLEVLTGTKTQRGADLAGAKAAL------- 228

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                              I +P  G +   Q  +  +Y      L+ +VP  ++  I A
Sbjct: 229 --------AAARLKLGYTKITAPFDGVVGQRQVQT-GDYVNIGSSLIAVVPLPQVFII-A 278

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE 388
                Q+ HV  G    V    +     +K    +E+I P    Q      +  T  + +
Sbjct: 279 NYKETQLTHVAPGQPVDVTVDSFP---GEKLHGRVERIAPASGSQFALLPPDNATGNFTK 335

Query: 389 VI----LKITDLAFSDNNIELRNGFPAEVLFTA 417
           V+    ++I   A       L  G         
Sbjct: 336 VVQRIPVRIALDADQPLLARLLPGMSVVTHIRT 368



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 12/138 (8%), Positives = 43/138 (31%), Gaps = 9/138 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K  V +  Q+  G  L+  +  +    +   + ++   +  +D   + ++      
Sbjct: 82  GEVLKVAVSDFQQVKAGDILIQIDPADYEAQVAQAEANVAAAQAALDNLGNQIELQYATI 141

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                     + +            ++       S+ ++      R+          +  
Sbjct: 142 A---------QAEAQQVSAGAAEVQARQEEERQQSLSQTEAGTRQRLEQATAAYAKAQAD 192

Query: 185 SSLLRALLSSHQKDLTMM 202
               RA++++ +  L ++
Sbjct: 193 VRASRAVIAAQRHQLEVL 210


>gi|329894743|ref|ZP_08270545.1| Cobalt/zinc/cadmium efflux RND transporter, membrane fusion
           protein, CzcB family [gamma proteobacterium IMCC3088]
 gi|328922790|gb|EGG30122.1| Cobalt/zinc/cadmium efflux RND transporter, membrane fusion
           protein, CzcB family [gamma proteobacterium IMCC3088]
          Length = 584

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 67/178 (37%), Gaps = 16/178 (8%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L +  E    A       L   ++D  +  +  A  + +L   +K R+  T  SP AG 
Sbjct: 160 QLVNAQEELLIALKRNNGSLVTAAKDRLKALQLSAGLIKELEQTKKVRQTITFYSPQAGV 219

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +   +      Y +    L+ I       ++ A+V  +    +K+G   ++       + 
Sbjct: 220 VDGLKIR-EGFYVKPGDTLLSIGKLD-QVWVEAEVFERDAALIKEGLPVSMTL---DYLP 274

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            + +  +++ + P ++ +   L       V LK     F + + +L+    A+V   A
Sbjct: 275 GEDWTGVVDYVYPALNSKTRTL------RVRLK-----FGNPDFQLKPNMFAQVSIHA 321


>gi|218768904|ref|YP_002343416.1| multidrug resistance translocase [Neisseria meningitidis Z2491]
 gi|121052912|emb|CAM09264.1| multidrug resistance translocase [Neisseria meningitidis Z2491]
 gi|254674072|emb|CBA09856.1| putative multidrug resistance protein [Neisseria meningitidis
           alpha275]
          Length = 394

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 113 NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 172

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 173 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 215

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 216 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 273

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 274 MKIGQPAEL 282



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 64  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 123

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 124 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 183

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 184 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRT 224


>gi|325205397|gb|ADZ00850.1| fatty acid resistance protein A [Neisseria meningitidis M04-240196]
          Length = 390

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 109 NELIQAVRQNRRQNAATSQAAAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 168

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 169 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 211

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 212 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 269

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 270 MKIGQPAEL 278



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 55/161 (34%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 60  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELIQAVRQNR 119

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++A      + D+     + R    L   G   +     ++       +  ++
Sbjct: 120 RQNAATSQAAAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 179

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 180 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRT 220


>gi|306843933|ref|ZP_07476528.1| HlyD family protein secretion protein [Brucella sp. BO1]
 gi|306275688|gb|EFM57412.1| HlyD family protein secretion protein [Brucella sp. BO1]
          Length = 319

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 40  LFEIDPQPFQIELDQAKANLVQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFDRVLA 99

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 100 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 155

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 156 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFLAVGDPAFTLI-- 202

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 203 GADAWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITP 247


>gi|170738446|ref|YP_001767101.1| secretion protein HlyD family protein [Methylobacterium sp. 4-46]
 gi|168192720|gb|ACA14667.1| secretion protein HlyD family protein [Methylobacterium sp. 4-46]
          Length = 437

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/356 (8%), Positives = 88/356 (24%), Gaps = 45/356 (12%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +   + G  +  G  +   +  +    +                            
Sbjct: 102 GRLAQVLADEGDLVRAGQVVAVMDTRDLQAQMG--------------------------- 134

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                    + E +     +      +      +++  S        R++     +L+ +
Sbjct: 135 ---------QAEAMAGQAAQAVEEADRTLAQQETAIRSSEATVARAQRALDEANANLQQE 185

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S LR      +++L     L  K   + ++     + V    L        +     H 
Sbjct: 186 QSRLR----LAKQELARTSTLVGKGFAT-HETLDTRQQVVDVALAAEAAARARIGAAEHA 240

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                EA           +  +   +         +          ++ +P  G I Y +
Sbjct: 241 LAAAREAAAGAVAARDAAAARVGATRHALDAARHSVDFYRVNIADNSLTAPRDGPIQY-R 299

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +          ++ ++  +   Y+   +   +   V  G    +    Y D       
Sbjct: 300 IANVGEVLAAGGKVLTML-DAGYVYMDLYLPTAEAGRVTLGAEGRIVLDAYPDHVIPAKV 358

Query: 365 AIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             +        +  +  + + +  + + L++           +R G P        
Sbjct: 359 VFVASRAQFTPKTVETRDERDKLMFRIRLRVDPERLKGREALVRAGLPGIGYVRTD 414


>gi|241205112|ref|YP_002976208.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859002|gb|ACS56669.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 368

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/330 (11%), Positives = 88/330 (26%), Gaps = 41/330 (12%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            S   ++ +I      +     +  V + +     + L     + +          ++SV
Sbjct: 47  TSQAQVQAYIVGIAPEVTGRVVEVGVADNSRVEANQILFRIDPERYELAVSEAEASLASV 106

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            +S+      + +     +  +     LR   +   +       L ++   S+   +  +
Sbjct: 107 GQSMGASTAAVDAAQAKLVTAQVDRDNLREQAARAAE-------LQKRGVYSKARADSTK 159

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
               +S   +     E       +    ++                          ++ L
Sbjct: 160 SAFGQSEAAVTGAEAELAKAKEQLGPSGNDN-------------------PQLRAALAAL 200

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                   + T+ +P AG +   Q  ++       Q  M  +      +I A      ++
Sbjct: 201 EKARLDLLRTTVQAPSAGVVTNLQL-TTGKVVSAGQSAMTFI-DVGTIWITAAFKENSLE 258

Query: 341 HVKKGYTATVRFPHYADIREK------KFKAIIEKID-----PIISQQDNNLQTQEYYEV 389
            V  G  A V F                F       D     P I      +Q  + + V
Sbjct: 259 KVAVGNRAEVLFDALPGRVFPAQVESVGFGVSQGSTDPNTGLPTIRSDSGWVQEPQRFPV 318

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            L I +       +    G  A V+    +
Sbjct: 319 RLIIEEAQRPKGGVRY--GSQATVVIYTGD 346



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 52/159 (32%), Gaps = 5/159 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
             S+ +   +  +V I    +G + +  V + S++     L   +       +   + S+
Sbjct: 44  TPSTSQAQVQAYIVGIAPEVTGRVVEVGVADNSRVEANQILFRIDPERYELAVSEAEASL 103

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL-----LDFLGKYHSTCSKVFNYGIS 158
            ++   +    +A+D    K    +   ++  EQ      L   G Y    +        
Sbjct: 104 ASVGQSMGASTAAVDAAQAKLVTAQVDRDNLREQAARAAELQKRGVYSKARADSTKSAFG 163

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
               ++      +           N +  LRA L++ +K
Sbjct: 164 QSEAAVTGAEAELAKAKEQLGPSGNDNPQLRAALAALEK 202


>gi|21672946|ref|NP_661011.1| multidrug resistance protein A [Chlorobium tepidum TLS]
 gi|21646003|gb|AAM71353.1| multidrug resistance protein A [Chlorobium tepidum TLS]
          Length = 330

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 11/146 (7%)

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +L   E      TI +P  G +          Y    Q L+ IV    L  + A     Q
Sbjct: 190 ELKNAELQLSWTTITAPADGKVSKKNV-QPGQYVTPGQQLIAIVGSGDLWVV-ANFKETQ 247

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEV--ILK 392
           ++H++ G    ++   +     K+ K  I+ I      +      +  +  + +V   + 
Sbjct: 248 LEHMRPGQKVIIKVDAFP---GKELKGHIDSISAGTGAEFALLPPDNASGNFVKVTQRVP 304

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAK 418
           +  +     ++ L  G         K
Sbjct: 305 VKIVFDEKTDLPLAAGMNVIAEVKVK 330



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 39/119 (32%), Gaps = 17/119 (14%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLI--TWSILLPI--------EISVSSSGEIL 51
            +    + ++  P   + M  L I GI+  I   W  +  I        + +  +     
Sbjct: 7   SNIEAPDNEKGKPKPERSMGRLVIFGILLAIGLVWGGMKLIRSLSYEETDDAQIA----- 61

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
              N+  +     G + +    +   + +G  L+  +  +     D+ +  +   R  +
Sbjct: 62  --GNIYPVIPRVPGKVVEVLANDNQMVKKGDVLIRLDPSDYQIKRDMAEAQLLKARAAV 118


>gi|269964817|ref|ZP_06179054.1| putative secretion protein [Vibrio alginolyticus 40B]
 gi|269830477|gb|EEZ84699.1| putative secretion protein [Vibrio alginolyticus 40B]
          Length = 341

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 71/223 (31%), Gaps = 24/223 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S+ +   +     + ++ + +         +        R+ L   Q +     +L ++ 
Sbjct: 86  SRPYLLAVKQAKAAYQLAVQQHNVADKQVTEAVAGLDAARSNLIEAQVEYKRTDSLVKRK 145

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             S  DL+  +  +  +   L +     +  + +  E   EA +      +         
Sbjct: 146 LASDQDLDTAKNKLANAQASLEQARATVEKAIANRGEEGAEAAVVQQAAAQ--------- 196

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                     L   E       I SP+ G      +    +     Q L  ++      +
Sbjct: 197 ----------LAQAELNLSYTDITSPVDGIAGEINTH-VGSVVSVGQTLFPVI-LKDSYW 244

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +RA      + H+K G  A V    Y D+    +KA +E++ P
Sbjct: 245 VRANFKETDLTHIKPGMHADVVIDMYPDV---VWKATVEQLSP 284


>gi|116750800|ref|YP_847487.1| RND family efflux transporter MFP subunit [Syntrophobacter
           fumaroxidans MPOB]
 gi|116699864|gb|ABK19052.1| efflux transporter, RND family, MFP subunit [Syntrophobacter
           fumaroxidans MPOB]
          Length = 409

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 91/267 (34%), Gaps = 8/267 (2%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +           V+E+    R         +  +   ++      SV  + +        
Sbjct: 57  RMQAVERRTFPTVVEQVGTVRSRAEARVSSRIIAQVREILVREGDSVVGADEKDGKPTVM 116

Query: 174 IYLNRLDLENKSSLLRALLSS--HQKDLTMMKNLFEKNAVSQNDLNQQERIV-YKSTLEL 230
             L+  D++ +     A L++    K+++  +    ++ V     N+++    YK   EL
Sbjct: 117 ARLDDGDIQARLRQAEAQLAAVGRAKEVSSARLGAARSQVEAVRANREKAFSDYKRYAEL 176

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEI---SRDLEQNQRTFADEMSKLTILEKTR 287
           + +       + H   L +    +    +KE+     +LE+ +       + +       
Sbjct: 177 KRDQAATGQQVEHARALRNATEAQLQGSIKEVQVARGELERVEAQREHAEAAVAEARAML 236

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           +   I +P +G ++        + A   QPL  ++       + A+VT   +  +K G  
Sbjct: 237 DYTIIRAPFSGKVIRKMVD-VGDMASPGQPLF-LLEARSAPELHAQVTESLVPFLKTGQE 294

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPII 374
            ++R              I+ + DP+ 
Sbjct: 295 FSIRIDALDCSFPGVLSEIVPRSDPVT 321



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/151 (7%), Positives = 44/151 (29%), Gaps = 14/151 (9%)

Query: 67  IKKFQVENGSQILQGT-------PLLTFEDIETTDLIDLKKVSIKNL-------RCHIDT 112
           +++  V  G  ++           +   +D +    +   +  +  +          +  
Sbjct: 92  VREILVREGDSVVGADEKDGKPTVMARLDDGDIQARLRQAEAQLAAVGRAKEVSSARLGA 151

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +S ++ +    +     ++   E   D                 +       +K  ++ 
Sbjct: 152 ARSQVEAVRANREKAFSDYKRYAELKRDQAATGQQVEHARALRNATEAQLQGSIKEVQVA 211

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              L R++ + + +      +    D T+++
Sbjct: 212 RGELERVEAQREHAEAAVAEARAMLDYTIIR 242


>gi|256818970|ref|YP_003140249.1| hypothetical protein Coch_0123 [Capnocytophaga ochracea DSM 7271]
 gi|256580553|gb|ACU91688.1| conserved hypothetical protein [Capnocytophaga ochracea DSM 7271]
          Length = 310

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 97/270 (35%), Gaps = 32/270 (11%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +       V  ++     + ++       + ++  + RA L+  +++LT  +NL    A 
Sbjct: 67  LLKIQKEQVEATIASLKEKTQNPADQVALIRSQLEVQRAQLAQQERELTRTQNLVRGGAA 126

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q  L+                      ++  + +       +    L  I+        
Sbjct: 127 TQKQLDDL------------------SALIDQLRKQIAVTENQLKVSLTNINTQNRNVLS 168

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             A        +++   Q  I++PIAGT++ N +          +PL KI  ++ +  ++
Sbjct: 169 QEAPLQKNAQAVQEQINQGEIINPIAGTVLVNYAL-KGEMQTFGKPLYKIA-NTDVLTLK 226

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----Y 386
           A +T  Q+  +K G   TVR         + ++  I  I          +QT+       
Sbjct: 227 AYITGDQLSQIKLGQQVTVRTDA-GKGAYRTYQGEIIWISQKSEFTPKTIQTKSERANLV 285

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           Y + +K+ +  F      L+ G   EV+F 
Sbjct: 286 YAIKVKVKNDGF------LKIGMYGEVVFK 309



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/168 (10%), Positives = 63/168 (37%), Gaps = 4/168 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           +SG    ++  V + +  +G +  + VE G  + +G  +            +  + +I +
Sbjct: 24  ASGNFEADE--VIVSAQQTGQLIDYDVEEGKTLTEGQKVGQINVTLLKIQKEQVEATIAS 81

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS-KVFNYGISSVYRSL 164
           L+         +  + ++ +V       +E +L           + +     +S++   L
Sbjct: 82  LKEKTQNPADQVALIRSQLEVQRAQLAQQERELTRTQNLVRGGAATQKQLDDLSALIDQL 141

Query: 165 KMKLT-RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           + ++      + ++  ++  ++  + +  +  QK+   ++    +  +
Sbjct: 142 RKQIAVTENQLKVSLTNINTQNRNVLSQEAPLQKNAQAVQEQINQGEI 189


>gi|307719701|ref|YP_003875233.1| hypothetical protein STHERM_c20250 [Spirochaeta thermophila DSM
           6192]
 gi|306533426|gb|ADN02960.1| hypothetical protein STHERM_c20250 [Spirochaeta thermophila DSM
           6192]
          Length = 449

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 96/298 (32%), Gaps = 34/298 (11%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           L+       +  K             +  L +  + +L+   L  +   L   +++ +K+
Sbjct: 96  LEIRKIQAQSALKSAEAQARLAEARYRDALLQAETRFLSLEKLLVQRESLLHDIATLEKE 155

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR---------------ENIHEQKNMLRH 243
               K LFE   + ++ L   E  + K+  EL+               E+I      L  
Sbjct: 156 YQDRKILFEAGGIPEDTLRDAENALLKARNELKILEKNIETASIGLRDEDILSAGFPLPT 215

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
             +   +  +     ++E   ++ + Q   A   +++  +E   ++  + SPI G ++  
Sbjct: 216 SFDERKKLLIRLNTRVEEAQVEVAKAQVEVA--RAEIQSVEALSDETILRSPIDG-VLGT 272

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +      Y +++  +  I        + + +  K+   +K+G  A +           + 
Sbjct: 273 RYVEPGEYLKENTRVCTIFSSEDAWVVFS-IPEKEALLLKEGLEANIHVEALDQTLTGRI 331

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            AI   +DP         +   +                 E R G  A V      T 
Sbjct: 332 DAISPFVDPKTGNVTVKARLPRFLR---------------EARPGMFARVSVKTGTTV 374


>gi|304411150|ref|ZP_07392765.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS183]
 gi|307306445|ref|ZP_07586188.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           BA175]
 gi|304350343|gb|EFM14746.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS183]
 gi|306910736|gb|EFN41164.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           BA175]
          Length = 410

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 86/272 (31%), Gaps = 24/272 (8%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +S   S+  +++         L  E K   L A + S  +   +   L      S   +
Sbjct: 57  QASKLVSVGAQVSGQILSLPLALGDEVKKGDLIAQIDSLAQQNNLKNALA-----SLKSI 111

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           N Q R       + +     Q+ ML        +  +  AN L     +LEQ +      
Sbjct: 112 NAQFRAKQAQIRQAKLEFSRQQQMLADKASSRADYEVADAN-LTVYQAELEQLEAQKQQA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAKV 334
              +           I +P+ GT+VY+           +Q    IV         ++A++
Sbjct: 171 EINVDSARIDLGYTKITAPMDGTVVYSAV-EVGQTVNANQTTPTIVEMAQLDTMTVKAQI 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-------IISQQDNNLQTQEYY 387
           +   + +V  G      F          ++ I+  I+P         S   ++     YY
Sbjct: 230 SEADVVNVHPGQAVY--FTVLGKPNHP-YRGILRAIEPGPISMDGDDSNMSSSDSDAIYY 286

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +  +      + +  LR G  A+V      
Sbjct: 287 HGLFDV-----ENPDRTLRIGMTAQVSIVLAK 313



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G +     +V + +  SG I    +  G ++ +G  +   + +   + +   
Sbjct: 46  IENSVLANGMLQAS-KLVSVGAQVSGQILSLPLALGDEVKKGDLIAQIDSLAQQNNLKNA 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             S+K++      +++ +           K   SR++Q+L       +   +V +  ++ 
Sbjct: 105 LASLKSINAQFRAKQAQI--------RQAKLEFSRQQQMLADKASSRADY-EVADANLTV 155

Query: 160 VYRSLKMKLTRMRSIYLN 177
               L+    + +   +N
Sbjct: 156 YQAELEQLEAQKQQAEIN 173


>gi|229013772|ref|ZP_04170900.1| multidrug resistance protein A [Bacillus mycoides DSM 2048]
 gi|229169295|ref|ZP_04297006.1| multidrug resistance protein A [Bacillus cereus AH621]
 gi|228614190|gb|EEK71304.1| multidrug resistance protein A [Bacillus cereus AH621]
 gi|228747441|gb|EEL97316.1| multidrug resistance protein A [Bacillus mycoides DSM 2048]
          Length = 225

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 62/173 (35%), Gaps = 17/173 (9%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSS 309
           A  +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++
Sbjct: 62  AAGKLTDWKAEVGKNYNEN-----DKLGAVTVAGANGEQTVDVTIPQNATVVQSNA-TTN 115

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            +     P+          ++ A +    I  V+KG T  V    Y D         +E+
Sbjct: 116 AFVGAGSPIAYAF-DMNNLWVTANIEETNIDDVQKGQTVDVYVDAYPDTT---LTGKVEQ 171

Query: 370 IDPIISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
           +    +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 172 VGLTTANTFSMLPSSNSTANYTKVKQVVPVKISLDHSKSVNIVPGMNVSVRIH 224


>gi|152976952|ref|YP_001376469.1| multidrug resistance protein A [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152025704|gb|ABS23474.1| multidrug resistance protein A [Bacillus cytotoxicus NVH 391-98]
          Length = 217

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 58/170 (34%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVYNQSFSSSNYA 312
           +   +  E+ +   +N     D++  +T      EQ   +  P   T+V + + +++ + 
Sbjct: 57  KLTEWQAEVGKSYNEN-----DKLGAVTTSGSNGEQTMDVTIPQGATVVQSNA-TTNAFV 110

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+      +   ++ A +    I  V+KG    V    Y D         +E+I  
Sbjct: 111 GAGSPIAYAFDMND-LWVTANIEETDIDDVQKGQEVDVYVDAYPDTT---LTGKVEQIGL 166

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 167 TTANTFSMLPSSNSTANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 216


>gi|240116532|ref|ZP_04730594.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           PID18]
 gi|260439711|ref|ZP_05793527.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           DGI2]
          Length = 384

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 103 NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHART 162

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 163 AVSQAQAAVKAALAEESSARAALGGGVSLRE-----------------QPEVQTAIGRLK 205

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                  +  + +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 206 DAWLNLRRTQVRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 263

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 264 MKIGQPAEL 272



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 5/130 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 54  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 113

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R +  T ++       + D+     + R    L   G   +         +S    ++K 
Sbjct: 114 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARTAVSQAQAAVKA 173

Query: 167 KLTRMRSIYL 176
            L    S   
Sbjct: 174 ALAEESSARA 183


>gi|158334929|ref|YP_001516101.1| RND family efflux transporter MFP subunit [Acaryochloris marina
           MBIC11017]
 gi|158305170|gb|ABW26787.1| efflux transporter, RND family, MFP subunit [Acaryochloris marina
           MBIC11017]
          Length = 404

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/234 (10%), Positives = 72/234 (30%), Gaps = 27/234 (11%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               +       +   ++ +      +       ++   +   A L     +    + L 
Sbjct: 78  QLSPEKSQADFGAAVANINVATAASSNAQAQLRAVQADRARAVAELELQNTEFQRTQTLV 137

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           ++ A+++  L+Q  R    +   LR    + +    +                      L
Sbjct: 138 KQGALAKQVLDQVRRDRASAQAALRAVDEQIRAAKAN----------------------L 175

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            Q++ +     +      +  +   I +PIAG +         ++ Q    L  I+  ++
Sbjct: 176 TQSRASLNQAKASALSAREDVQDTRITAPIAGMVGDIPI-KLGSFVQAGDTLTTII-QNQ 233

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
              I   +  ++ + +  G    +     A  ++   +  I  + P ++ +  +
Sbjct: 234 TLEINLNIPIEKREQLAVGLPVEL---SQAQSQDILAQGRISFVSPTVNNESQS 284



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 47/144 (32%), Gaps = 5/144 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLI-----DLKKVSIKNLRCHIDTEKSALDF 119
           G + +  V +GS++  G P++     ++         ++   +  +            D 
Sbjct: 57  GRVTQIFVSSGSRVSPGQPIVQLSPEKSQADFGAAVANINVATAASSNAQAQLRAVQADR 116

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                ++  +  E +  Q L   G              +S   +L+    ++R+   N  
Sbjct: 117 ARAVAELELQNTEFQRTQTLVKQGALAKQVLDQVRRDRASAQAALRAVDEQIRAAKANLT 176

Query: 180 DLENKSSLLRALLSSHQKDLTMMK 203
                 +  +A   S ++D+   +
Sbjct: 177 QSRASLNQAKASALSAREDVQDTR 200


>gi|256026702|ref|ZP_05440536.1| RND family efflux transporter MFP subunit [Fusobacterium sp. D11]
 gi|289764698|ref|ZP_06524076.1| efflux transporter [Fusobacterium sp. D11]
 gi|289716253|gb|EFD80265.1| efflux transporter [Fusobacterium sp. D11]
          Length = 389

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 98/282 (34%), Gaps = 25/282 (8%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYR-SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           L + + +   + + V +  + S  R  +  +++   +     L  E K   L A + S  
Sbjct: 35  LTETVKRSDISQTIVASGTVRSNNRVEVGAQVSGKITKINVVLGQEVKKGDLLATIDSLT 94

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++  + +      A S+  + Q +R       ++ ++   + + L  +N +  +      
Sbjct: 95  QNNNLDE------AKSKLKVYQAQRKSASVKYQVAQSKFNRISKLYQMNSISQDDYETAK 148

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             L+     + +     A     +   E      +I SPI G ++     S       +Q
Sbjct: 149 EELEVAKASVTEYDELIAQASISVKTAETNLSYTSITSPIDGVVISIPV-SEGQTVNSNQ 207

Query: 317 PLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               IV  +      I+A+V    I  +KKG    V      D   K     ++ +D   
Sbjct: 208 SAPTIVQVADLSKMLIKAEVAEGDITKIKKGMEVEVATVANPDKTYKS---TVQSVDYAT 264

Query: 375 SQQDNNLQTQE-------YYEVILKITDLAFSDNNIELRNGF 409
           S   +N  ++        YY   + + +    D N+ +  G 
Sbjct: 265 STLTDNEYSESVSNTSAVYYYANIILDN---KDGNLRI--GM 301



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 57/147 (38%), Gaps = 17/147 (11%)

Query: 19  RMTLLSIIGIIGLITWSIL----------------LPIEISVSSSGEILNEDNVVEIKSP 62
           +  +L I+ I+G++ +S                    I  ++ +SG +   +N VE+ + 
Sbjct: 7   KWIILVIVLILGVVYYSFFRKKDDGVKYLTETVKRSDISQTIVASGTVR-SNNRVEVGAQ 65

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I K  V  G ++ +G  L T + +   + +D  K  +K  +    +         +
Sbjct: 66  VSGKITKINVVLGQEVKKGDLLATIDSLTQNNNLDEAKSKLKVYQAQRKSASVKYQVAQS 125

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTC 149
           K++ + K ++       D+        
Sbjct: 126 KFNRISKLYQMNSISQDDYETAKEELE 152


>gi|313891685|ref|ZP_07825292.1| efflux transporter, RND family, MFP subunit [Dialister
           microaerophilus UPII 345-E]
 gi|313119963|gb|EFR43148.1| efflux transporter, RND family, MFP subunit [Dialister
           microaerophilus UPII 345-E]
          Length = 359

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 66/218 (30%), Gaps = 21/218 (9%)

Query: 207 EKNAVSQNDLNQQ--ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           + + V++  +      R +  +  + +  +  +++    + +LYDE  +          +
Sbjct: 78  QNDYVTKGQVLATVFSRGIGDAFHQAQNTLINKESYYNRMQKLYDENAISL--------Q 129

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS---FSSSNYAQQSQPLMKI 321
            LE  +  + +  +     +   ++  I++PI G ++        + S        +M I
Sbjct: 130 ALENAKLDYLNSKALYEKAKTDMDETEIVAPIDGYVIGEPMKEGTTLSQGLSSQMVIMTI 189

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                   I   V    I  VK G         Y     K F   +  I     Q+    
Sbjct: 190 A-DFSSMRIELLVDETDIGLVKIGQYVEFTVDAYP---GKIFHGKVSDISRKEKQKTGAA 245

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               +Y V + + D         L     A        
Sbjct: 246 AAVVHYTVYVDVDDNDKDG----LYPSMTARASIRGNE 279



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 17/126 (13%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVS----------------SSGEILNEDNVVEIKSPFS 64
            +  I+ +I  + W      +  V                 ++G I    N V++ +  S
Sbjct: 10  IVAVIVSLIFFVYWKFFTQHDKKVEYVLGNVTRGDIVSTIDATGTIQPV-NRVDLSTVLS 68

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++K  V+    + +G  L T       D     + ++ N   + +  +   D      
Sbjct: 69  GTLEKVMVKQNDYVTKGQVLATVFSRGIGDAFHQAQNTLINKESYYNRMQKLYDENAISL 128

Query: 125 DVLEKA 130
             LE A
Sbjct: 129 QALENA 134


>gi|311105301|ref|YP_003978154.1| multidrug resistance protein [Achromobacter xylosoxidans A8]
 gi|310759990|gb|ADP15439.1| multidrug resistance protein A [Achromobacter xylosoxidans A8]
          Length = 397

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 49/404 (12%), Positives = 108/404 (26%), Gaps = 84/404 (20%)

Query: 23  LSIIGIIGLITWSIL-LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
             +I I   I W++     E +  +        N+V+I     G +   + ++   +  G
Sbjct: 23  FILIAIAYGIWWALFGAHFESTDDAY----VHGNLVQITPQVPGTVVAIEADDTETVAAG 78

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            PL+  +  +T        V+++  +  +      +  +  + D L    + R   +L  
Sbjct: 79  QPLVRLDPADTD-------VALQQAQAKLAQTVRQVRTIYVQNDALAADVDLRNADILRA 131

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             +     S V                                                 
Sbjct: 132 QAELTRAQSDVNRRQ--------------------------------------------- 146

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              L +   VS  ++   E         L+            +     +     A     
Sbjct: 147 --QLAKSGGVSGEEILHAE-------AALKSAQSGLAQARAALAASRAKLATNQALTQGT 197

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
              +    Q+  A   +        + +  + +P+ G I   +S            LM +
Sbjct: 198 TVANHPDVQQAAAGLRNAWLA----QSRTVLPAPVGGVIAR-RSVQVGQRVAPGSALMTV 252

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID---------- 371
           VP     +I A     Q++ ++ G  A +    Y       +   I  +D          
Sbjct: 253 VPLD-QVWIEANFKEGQLRKMRIGQPAKMVADLYGSSVT--YHGTIAGLDAGTGSAFALL 309

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           P  +   N ++  +   V + +       + + +      EV  
Sbjct: 310 PAQNATGNWIKVVQRVPVRIALDPEDLKKHPLRVGLSMDVEVDV 353


>gi|261251376|ref|ZP_05943950.1| multidrug resistance efflux pump [Vibrio orientalis CIP 102891]
 gi|260938249|gb|EEX94237.1| multidrug resistance efflux pump [Vibrio orientalis CIP 102891]
          Length = 354

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 69/226 (30%), Gaps = 21/226 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q +          +  +   +     SL+    +  ++Y  R       +  +A   + 
Sbjct: 63  NQQVSEGDVLFQVDAHKYQIALQQAELSLQSAYEKEATLYSQREAALANITRAQATYDNA 122

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            ++   ++ L ++  +SQ++L+        +   L+      K +   + E   ++    
Sbjct: 123 HREYARLQKLSKQKVISQSNLDAAYAQNQVARAALKAEKQSLKVIEAQLGESVGQSTAVR 182

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                 + L   +       +++P  G I   Q     + A  +
Sbjct: 183 L-------------------AKNGLEKAQLDVSNTKVIAPSDGVITNLQL-EIGSMANIN 222

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
            P++  VP     ++ A    K +  +   Y A V F  Y      
Sbjct: 223 MPIITFVPTGS-LWVTADFREKSVAKLSDDYRAVVAFDAYPGETYP 267



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 10/195 (5%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            KR     I+  I L  +         +++ G +  +  VV++    SG +    V N  
Sbjct: 7   FKRWMRTLIVLFIALFFYITTADRHAPITTEGRV--QGYVVQLAPEVSGKVTDIFVANNQ 64

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSALDFLNNKYDVLEK 129
           Q+ +G  L   +  +    +   ++S+++       L    +   + +      YD   +
Sbjct: 65  QVSEGDVLFQVDAHKYQIALQQAELSLQSAYEKEATLYSQREAALANITRAQATYDNAHR 124

Query: 130 AFESREE-QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            +   ++      + + +   +   N    +  ++ K  L  + +     +       L 
Sbjct: 125 EYARLQKLSKQKVISQSNLDAAYAQNQVARAALKAEKQSLKVIEAQLGESVGQSTAVRLA 184

Query: 189 RALLSSHQKDLTMMK 203
           +  L   Q D++  K
Sbjct: 185 KNGLEKAQLDVSNTK 199


>gi|37521599|ref|NP_924976.1| nickel-cobalt resistance protein [Gloeobacter violaceus PCC 7421]
 gi|35212597|dbj|BAC89971.1| glr2030 [Gloeobacter violaceus PCC 7421]
          Length = 486

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 91/254 (35%), Gaps = 18/254 (7%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           R+  +  +R     +   L  L SS  + L +     +  A +++   +    + +ST E
Sbjct: 99  RVLRLVASRGQAVRRGETLLVLDSSEIRALAVQSEQAKAAARAESKQAEARLRLARSTFE 158

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             + + + K   R   ++      + A  L+ +   L  +       +++L        +
Sbjct: 159 REKELVDLKISARKDFQVAQSEYEQAAADLEAVRARLRLSGAQLDARLAQLGQRGVQAAR 218

Query: 290 ---KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
               T+ S ++G +   QS S+    +   PL ++V  +   +  A++  + +  V+ G 
Sbjct: 219 DGRVTVASAVSGFVAQ-QSVSAGEAVEAGTPLYRVVDTAGGVWATAQIYEQDLAQVRVGR 277

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              V    Y     + FK  ++ +DP +  +   L                 ++    L+
Sbjct: 278 PVEVVTAAYP---GQVFKGRVDSVDPAVDPETRTLAV-----------RAVLANPGGRLK 323

Query: 407 NGFPAEVLFTAKNT 420
               A +  T  + 
Sbjct: 324 PEMFATLRVTTSDR 337



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 62/182 (34%), Gaps = 13/182 (7%)

Query: 46  SSGEILN-EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           ++G I        EI +P +G + +     G  + +G  LL  +  E   L    + +  
Sbjct: 78  ANGRIEAIPGRSAEILAPVAGRVLRLVASRGQAVRRGETLLVLDSSEIRALAVQSEQAKA 137

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             R      ++ L         L ++   RE++L+D       +  K F    S   ++ 
Sbjct: 138 AARAESKQAEARL--------RLARSTFEREKELVD----LKISARKDFQVAQSEYEQAA 185

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                    + L+   L+ + + L        +D  +         V+Q  ++  E +  
Sbjct: 186 ADLEAVRARLRLSGAQLDARLAQLGQRGVQAARDGRVTVASAVSGFVAQQSVSAGEAVEA 245

Query: 225 KS 226
            +
Sbjct: 246 GT 247


>gi|325273861|ref|ZP_08140039.1| secretion protein HlyD family protein [Pseudomonas sp. TJI-51]
 gi|324101002|gb|EGB98670.1| secretion protein HlyD family protein [Pseudomonas sp. TJI-51]
          Length = 301

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 85/309 (27%), Gaps = 28/309 (9%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT--RMRSIYLNRL 179
                ++        Q  D+  +     + V     +        +L   R+        
Sbjct: 1   APPQPVQAGDVLVRLQDQDYRARVEQAQASVAEAQAALAAAQAGQQLAAERINQRQHAIQ 60

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             E       A       D+   + L    A +   L        ++   L+      + 
Sbjct: 61  QAEATVRSATAERQRTALDVQRYRGLVRDQAATAQRLESANAQAAQAQAALQGAQAALRE 120

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               +      +         +    L+Q     A   ++  +  + +    I +P+AG 
Sbjct: 121 QRAQLAMAKARST--------QADAVLQQRAAALAHAQARRQLASQDQHDTVIRAPLAGI 172

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +   +  +   Y    QPL+ +VP  +   + A     Q+  ++ G    +R   +A   
Sbjct: 173 VGQRRVRA-GQYVVPGQPLLAVVPVQQAYVV-ANYKETQLARMRPGQPVEIRVDSFA--- 227

Query: 360 EKKFKAIIEKIDPII----------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            +     +    P            +   N  +  + + V + +     +    +L  G 
Sbjct: 228 GQPLHGRVASFSPASGNVFALLPSDNATGNFTKIVQRFPVRILLDP---APAGPQLLPGM 284

Query: 410 PAEVLFTAK 418
               +   +
Sbjct: 285 SVVSIVDTR 293


>gi|208779926|ref|ZP_03247270.1| HlyD family secretion protein, putative [Francisella novicida FTG]
 gi|208744381|gb|EDZ90681.1| HlyD family secretion protein, putative [Francisella novicida FTG]
          Length = 341

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 78/251 (31%), Gaps = 11/251 (4%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL- 230
           +   L      +K    +  L+  Q+ +    N+ + N             +    ++L 
Sbjct: 96  KDYQLKVAQANSKVIQAKGQLAIAQEQV----NVAKSNLTKAQSSLDTATSMADRYIKLY 151

Query: 231 RENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +++    ++  ++IN+       +   Y  LK+    +E  +                  
Sbjct: 152 KDDAGSLQDAQKYINQKIQAQKAKDEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLG 211

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             T+++P  G +   + +         Q L   +  +K  +I A      +  +K G   
Sbjct: 212 YTTLIAPDDGYVSNLKLY-KGQLVSSGQALFGFI-DNKKWWIDANFKETDLDRIKPGQKV 269

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIELR 406
            +    Y+     K  +I      + S       T  + +V     +  +  +D    LR
Sbjct: 270 EIELDMYSHSYTGKVDSISYATGSVFSLLPPENATGNWVKVTQRFPVKIILKNDPKYPLR 329

Query: 407 NGFPAEVLFTA 417
            G  A V    
Sbjct: 330 VGASATVKVDT 340



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 57/185 (30%), Gaps = 10/185 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
              +++ I     G I+K  + N   + +G  L+  E         +    +   K  + 
Sbjct: 58  VNADIISISPKVGGYIEKVYIHNNQFVHKGDKLVQIEPKDYQLKVAQANSKVIQAKGQLA 117

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +  ++  KS L    +  D    +   R  +L            K  N  I +  ++ 
Sbjct: 118 IAQEQVNVAKSNLTKAQSSLDT-ATSMADRYIKLYKDDAGSLQDAQKYINQKIQA-QKAK 175

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIV 223
               + ++   L     + +    +    +   +L     +  +   VS   L + + + 
Sbjct: 176 DEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLGYTTLIAPDDGYVSNLKLYKGQLVS 235

Query: 224 YKSTL 228
               L
Sbjct: 236 SGQAL 240


>gi|161870752|ref|YP_001599925.1| fatty acid efflux system protein [Neisseria meningitidis 053442]
 gi|161596305|gb|ABX73965.1| fatty acid efflux system protein [Neisseria meningitidis 053442]
          Length = 384

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 103 NELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 162

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 163 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 205

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 206 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 263

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 264 MKIGQPAEL 272



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 54  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELIQAVRQNR 113

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 114 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 173

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 174 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRT 214


>gi|325299821|ref|YP_004259738.1| efflux transporter, RND family, MFP subunit [Bacteroides
           salanitronis DSM 18170]
 gi|324319374|gb|ADY37265.1| efflux transporter, RND family, MFP subunit [Bacteroides
           salanitronis DSM 18170]
          Length = 416

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 106/356 (29%), Gaps = 93/356 (26%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISV---------------SSSGEILNE 53
            K++ P       +L+++  I     +  L I+                    +G++   
Sbjct: 12  QKKHIPYIAGGAVILALLVWIIFGNHASTLRIDGDALNIADVTYGEFNDYIRLNGQVQPI 71

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             V  +     GI+++  VE G+ + +G  +L   +                        
Sbjct: 72  SIVQ-LSPEEGGIVQEKVVEEGAHVKKGDVILRLSNSNLD-------------------- 110

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              L  LN + ++ EK    R  Q+                                   
Sbjct: 111 ---LQILNAESELAEKQNLLRNTQVT---------------------------------- 133

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +  ++L+ E +   L        +     + L+ +  +S+ +  Q E             
Sbjct: 134 MQQDKLNNETEKVQLDVDTRRKLRTFQQYERLYNERLISREEYLQAEEDY---------- 183

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                 + +  + L  E  ++ + Y    +  ++Q +    +    + ++ + +++  + 
Sbjct: 184 -----QVAQKQHALISERLVQDSIYR---TIQMDQMEDNLHNMRQNVLLIRERKDKLEVR 235

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           +PI G  +              Q + +I   S    I A +    I  V  G  AT
Sbjct: 236 APIDGE-LGLLDVELGQNITAGQMVGQINDLSD-FKIEAMIDEHYIDRVTNGLPAT 289


>gi|315127714|ref|YP_004069717.1| cation efflux system protein [Pseudoalteromonas sp. SM9913]
 gi|315016228|gb|ADT69566.1| putative cation efflux system protein [Pseudoalteromonas sp.
           SM9913]
          Length = 580

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 16/178 (8%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L +  E    A     + L   ++D  +  +  AD + KL    K ++  T  SP AG 
Sbjct: 162 QLVNAQEELLIALKRNNSSLISAAKDRLKALQLSADFVQKLEKTRKVQQTITFYSPQAGV 221

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +   +      Y +    L+ I       ++ A+V  +    +KKG   ++       + 
Sbjct: 222 VDGLKVR-EGFYVKPGNTLLSIG-QLDQVWVEAEVFERDAALIKKGLPVSMTL---DYLP 276

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            + +  +++ + P ++ +   L       V LK     F + + +L+    A+V   A
Sbjct: 277 GEDWAGVVDYVYPTLNSKTRTL------RVRLK-----FDNTDYQLKPNMFAQVSIHA 323


>gi|227824790|ref|ZP_03989622.1| predicted protein [Acidaminococcus sp. D21]
 gi|226905289|gb|EEH91207.1| predicted protein [Acidaminococcus sp. D21]
          Length = 382

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 75/263 (28%), Gaps = 39/263 (14%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +     L  + +      T+ + +    A+S  D  +    +    + +    ++     
Sbjct: 59  KKAKEALAQIRTDTVSRETVRQTVSATGALSAQDNVEINSKITGRIVAVYVKENQHVTAG 118

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE------------- 288
           + + +L D + ++     +    D E   R  A  + +  I +   +             
Sbjct: 119 QPLLKLDDTSLMKTQVMKEATLSDREATYRRDAQLLEEGAISQSVFDTAKANYDYAKADY 178

Query: 289 --------QKTILSPIAGTIVYNQSFSSSNYAQQS----QPLMKIVPHSKLTYIRAKVTP 336
                      I SPI G ++  +               Q +M  V       I   V  
Sbjct: 179 EQAVSNTNDTIITSPIDGYVIG-KPTPVGQTVSPGVSTPQVIMN-VATLDKMQIELMVDE 236

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             I  +K G T       Y D     FK II  I    +  +N      YY   + + ++
Sbjct: 237 SDIGQIKDGQTVEFTVDAYPDET---FKGIISLISRSATTTNN----VNYYTCYVDVDNV 289

Query: 397 AFSDNNIELRNGFPAEVLFTAKN 419
                + +L     A        
Sbjct: 290 -----DNKLLPTMTARANVIIGE 307



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 1/118 (0%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +VS++G +  +DNV EI S  +G I    V+    +  G PLL  +D        +K+ 
Sbjct: 80  QTVSATGALSAQDNV-EINSKITGRIVAVYVKENQHVTAGQPLLKLDDTSLMKTQVMKEA 138

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++ +       +   L+       V + A  + +    D+     +T   +    I  
Sbjct: 139 TLSDREATYRRDAQLLEEGAISQSVFDTAKANYDYAKADYEQAVSNTNDTIITSPIDG 196


>gi|229163560|ref|ZP_04291510.1| multidrug resistance protein A [Bacillus cereus R309803]
 gi|228619942|gb|EEK76818.1| multidrug resistance protein A [Bacillus cereus R309803]
          Length = 211

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 51  KLTDWKAEVGKNYNEN-----DKLGAVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 104

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+      +   ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 105 GAGSPIAYAFDMND-LWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LSGKVEQVGL 160

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 161 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 210


>gi|156740519|ref|YP_001430648.1| secretion protein HlyD family protein [Roseiflexus castenholzii DSM
           13941]
 gi|156231847|gb|ABU56630.1| secretion protein HlyD family protein [Roseiflexus castenholzii DSM
           13941]
          Length = 502

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 82/256 (32%), Gaps = 4/256 (1%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           +L P+   + ++G +    +V +++    G +++  V  G  +  G PL   +  E    
Sbjct: 46  VLAPVVQPIVANGIVAPVSHV-DLRFAMPGTVREVLVREGDMVRAGDPLARLDTDELETR 104

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           I   + ++   + H +   SA   ++ +    E        + +      H+  +     
Sbjct: 105 IAQARANLSAAQAHYELLMSAATPVDIQRAQAELTRAQARLREVSNAVTSHTRAAAQSRL 164

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             +    +          +   R +L    + L+A       + T ++ L  + A +   
Sbjct: 165 DAARAALARLEAGPDPADVRALRAELRQAEADLQATRDRLSLEKTTLR-LQMEQAANLLR 223

Query: 216 LNQQERIVYKSTLELREN--IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             Q E    +   + R      +Q+          D A              ++  +   
Sbjct: 224 ERQTEYARIRDENQARSEPLTSDQRTREVTARLAMDNAEKALEQARVAYDAAVQAERTGI 283

Query: 274 ADEMSKLTILEKTREQ 289
           A   +++  +    E+
Sbjct: 284 AATEARVDAIRARLER 299



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/334 (10%), Positives = 99/334 (29%), Gaps = 18/334 (5%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +  +   L    + +  +L+   D        L  + +        R+ +      +  +
Sbjct: 179 DPADVRALRAELRQAEADLQATRDRLSLEKTTLRLQMEQAANLLRERQTEYARIRDENQA 238

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               + +   +    +        +++   R+  +      R  +++ +  +  ++   E
Sbjct: 239 RSEPLTSDQRTREVTARLAMDNAEKALEQARVAYDAAVQAERTGIAATEARVDAIRARLE 298

Query: 208 KNAV-----SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           +                     +    L+             +    EA LE        
Sbjct: 299 RLLAGPAPDQLAAARAAVAQAEEDLARLQGEQRAAAIEAAQADVAIAEAELERL-LAGAR 357

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
             +    +    +  + L   E+  E+  + +PIAG +      +    A      +++ 
Sbjct: 358 PAEAAMARARVEEAQATLEQAERALERAILRAPIAGIVAALNVKA-GEIADPQIVAVRLA 416

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                      ++   +  + +G  A +RF    D+   +    +  I P+ + ++ +  
Sbjct: 417 DVRGWRIETTNLSELSVTRLHEGAPAIIRFNSLPDL---EISGKVSGIRPLGTGREGDAT 473

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
               Y VI+    +     +  LR    A+V  T
Sbjct: 474 L---YTVIITPDHI-----DARLRWNMTAQVQIT 499


>gi|52843118|ref|YP_096917.1| lipoprotein [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|52630229|gb|AAU28970.1| lipoprotein [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
          Length = 381

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 77/239 (32%), Gaps = 31/239 (12%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +   S  +      + L+    +S+N+   ++  +  + + L +   +   ML  +++  
Sbjct: 107 KDSYSIAKAKFVGTEELWNAGLISKNNYLSEKSGLDTARVTLMQATRKLSEMLEKMDDKN 166

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY------ 302
            +     +                 AD      IL        + +P  G ++Y      
Sbjct: 167 TQNISNLS----------------LADFDKVRKILTSNHNLIHLKAPSDGIMLYPPKSGE 210

Query: 303 --NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
             N   +  +  +  Q +  I    K   +   V    I  ++ G  AT+    +   + 
Sbjct: 211 DKNNRVTVGSTIKSGQVIALIG-DLKGISVEIDVPEIDIDKIRPGMEATISGVAFGRHQ- 268

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              K  +  ++   S  + +      +  ++++  L     +  ++ G  A +    ++
Sbjct: 269 --LKGKLVAVNAQAS--NTSTGGLPSFTAVVEVNSLTPEQQSW-IKVGMSASIELNVES 322


>gi|229543719|ref|ZP_04432779.1| biotin/lipoyl attachment domain-containing protein [Bacillus
           coagulans 36D1]
 gi|229328139|gb|EEN93814.1| biotin/lipoyl attachment domain-containing protein [Bacillus
           coagulans 36D1]
          Length = 216

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 19/136 (13%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +P  GTIV N + + + Y      L +        Y+ A+V    +  VK G    V
Sbjct: 89  DIKAPADGTIVKNSAVA-NTYVAAGTTLAQSYDLDD-LYVTAEVKETDLNDVKTGQDVDV 146

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSD 400
               Y + +       ++ I    +        +  +  Y +      V +K+       
Sbjct: 147 YVDAYPNTK---LTGTVDSIGKAAASTFSLMPTDRSSGNYTKETQVIPVKVKLDSYG--- 200

Query: 401 NNIELRNGFPAEVLFT 416
             ++L  G    V   
Sbjct: 201 -GLDLVPGMNVTVRIH 215


>gi|330955496|gb|EGH55756.1| secretion protein [Pseudomonas syringae Cit 7]
          Length = 128

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 36/121 (29%), Gaps = 12/121 (9%)

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           P +   +    +  + +  V+ G T  +R+  Y   R       +  I       +  + 
Sbjct: 2   PANAKLHAELYLPSRSVGFVRAGDTVMLRYQAYPYQRFGLQPGRVSSISRTALPAEEVMT 61

Query: 383 ----------TQEYYEVILKITDLAFSDNN--IELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                        +Y V + +             LR+G   +     +   L + ++ P+
Sbjct: 62  LGNVSEQMREQGPFYRVTVALASQVIEGQGKRERLRSGMQLDADIMQEKLPLYEWLLEPL 121

Query: 431 T 431
            
Sbjct: 122 R 122


>gi|225165781|ref|ZP_03727569.1| efflux transporter, RND family, MFP subunit [Opitutaceae bacterium
           TAV2]
 gi|224799979|gb|EEG18420.1| efflux transporter, RND family, MFP subunit [Opitutaceae bacterium
           TAV2]
          Length = 298

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 77/219 (35%), Gaps = 26/219 (11%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQRTFAD 275
           + +  V ++   +     + +   R +       ++       L++             +
Sbjct: 83  RYQLAVSQAEAAVAMRRADMEQRHRELERRRQLVSVSVITQEALEQAESGDTSAAAALKE 142

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            +  L +     E+  + SP+ G +   Q     +YA   + ++ +V +S   Y+     
Sbjct: 143 ALVALDLARLNLERTQVRSPVNGHVANLQID-LGDYASAGKSMLAVV-NSDSYYVAGYFE 200

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----------- 384
             +I+H+++G   ++R   +      + +  +E I P ++ ++N+  T            
Sbjct: 201 ETKIRHIREGAPVSIRLMGHPQ----ELRGRVESIAPAVADRENSPGTDLVANVNPTFSW 256

Query: 385 ----EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               +   V + I  +    + + +  G  A V+     
Sbjct: 257 VRLAQRIPVRVSIDRM---PDGMRIHAGMTATVVVEGNE 292



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 73/209 (34%), Gaps = 4/209 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLP-IEISVSSSGEILNEDNVVEIKSPFSGII 67
           LK+    S +    L ++ +   + W      +E   +  G +     +V +    SG+I
Sbjct: 2   LKKILTMSARVSVTLLVVALAVFLGWRFWRHYMESPWTRDGRV--RAMIVAVAPDVSGVI 59

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            + +V +  Q+ +G  L   +       +   + ++   R  ++     L+       V 
Sbjct: 60  TELRVRDNQQVRKGDTLFVIDSARYQLAVSQAEAAVAMRRADMEQRHRELERRRQLVSVS 119

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSS 186
               E+ E+          +    +    ++ +        + +     N ++DL + +S
Sbjct: 120 VITQEALEQAESGDTSAAAALKEALVALDLARLNLERTQVRSPVNGHVANLQIDLGDYAS 179

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             +++L+    D   +   FE+  +    
Sbjct: 180 AGKSMLAVVNSDSYYVAGYFEETKIRHIR 208


>gi|225852563|ref|YP_002732796.1| secretion protein HlyD family protein [Brucella melitensis ATCC
           23457]
 gi|225640928|gb|ACO00842.1| secretion protein HlyD family protein [Brucella melitensis ATCC
           23457]
          Length = 366

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 87  LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFNRVSA 146

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 147 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 202

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 203 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFLAVGDPAFTLI-- 249

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 250 GADAWVNSNIKETDLTHIKVGDPATVVLDSYLDQ---PLQGEVQSITP 294



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 25/241 (10%), Positives = 70/241 (29%), Gaps = 24/241 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIK 60
           ++    HP   + + ++  +  I +  W             G+ ++ED+       V I 
Sbjct: 12  QDQSPKHPMLRRILLIVGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAIT 63

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG + +  V     + +G  L   +       +D  K ++      +    + L   
Sbjct: 64  PQVSGQVIRVAVGPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKL----AGLVLT 119

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +        +       +   +  +     F            +++ +          
Sbjct: 120 YKQQLASVAQAKDDVTFAQEQFNRVSALVHDKFEARAQFDQAERALQVAKQEQNAAASAA 179

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
               + L   L    Q+  +    L  K   ++ +L ++   + +        + + +N+
Sbjct: 180 AATLAQLGGTLDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPFAGTVTQVENI 233

Query: 241 L 241
            
Sbjct: 234 Q 234


>gi|160873954|ref|YP_001553270.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS195]
 gi|160859476|gb|ABX48010.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS195]
          Length = 416

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 73/240 (30%), Gaps = 35/240 (14%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-- 262
            +K   ++Q D   Q+  +  +   L+    + +     I +   E + +      +   
Sbjct: 89  VKKGDLIAQIDSLAQQNNLKDALASLKSINAQFRAKQAQIRQAKLEFSRQQQMLADKASS 148

Query: 263 --------------SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                           DLEQ +         +           I +P+ GT+VY+     
Sbjct: 149 RADYEVADANLTVYQADLEQLEAQKQQAEINVDSARIDLGYTKITAPMDGTVVYSAV-EV 207

Query: 309 SNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                 +Q    IV         ++A+++   + +V  G      F          ++ I
Sbjct: 208 GQTVNANQTTPTIVEMAQLDTMTVKAQISEADVVNVHPGQAVY--FTVLGKPNHP-YRGI 264

Query: 367 IEKIDP-------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  I+P         S   ++     YY  +  +      + +  LR G  A+V      
Sbjct: 265 LRAIEPGPISMDGDDSNMSSSDSDAIYYHGLFDV-----ENPDRTLRIGMTAQVSIVLAK 319



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G +     +V + +  SG I    +  G ++ +G  +   + +   + +   
Sbjct: 52  IENSVLANGMLQAS-KLVSVGAQVSGQILSLPLALGDEVKKGDLIAQIDSLAQQNNLKDA 110

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             S+K++      +++ +           K   SR++Q+L       +   +V +  ++ 
Sbjct: 111 LASLKSINAQFRAKQAQI--------RQAKLEFSRQQQMLADKASSRADY-EVADANLTV 161

Query: 160 VYRSLKMKLTRMRSIYLN 177
               L+    + +   +N
Sbjct: 162 YQADLEQLEAQKQQAEIN 179


>gi|90022878|ref|YP_528705.1| GAF domain-containing protein [Saccharophagus degradans 2-40]
 gi|89952478|gb|ABD82493.1| GAF domain protein [Saccharophagus degradans 2-40]
          Length = 578

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 61/187 (32%), Gaps = 17/187 (9%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS-KLTILEKTREQKTILS 294
           + +   R +     +    + N L    R          D+ + +L ++E+  ++  + S
Sbjct: 385 DLRLQRRKLISELQQHRHTYNNALANSERAQATIASALVDQATIQLELIEQQLKRTLLRS 444

Query: 295 PIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           PI G +V      S      Q + L +IV  ++   +   +  + I ++KK     V   
Sbjct: 445 PIEGVVVSEDVSQSVGAPVSQGERLFEIV-ANQQYRVLLYIDERDIAYIKKQQRGHVVLT 503

Query: 354 HYADIREKKFKAIIEKIDPI-ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                        + + D + I+  +   + + Y+ V     +         LR G    
Sbjct: 504 S--------LPGEVFEFDVLKITPLNEVREGRNYFRV-----EAQLLAAPATLRPGMTGN 550

Query: 413 VLFTAKN 419
                  
Sbjct: 551 GKIAVGE 557



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 52/150 (34%), Gaps = 6/150 (4%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVV-EI 59
           +   + +  +      +   + L+   ++  + + +++ +      +GE + +      +
Sbjct: 294 VSKQLAERARGRLAKWIGPGSWLAKTLVVSALMFVVVMLLPGQYRVTGEAVLQGTQKHLV 353

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR-----CHIDTEK 114
            +   G + K  V  G Q+L    L   +D +           ++  R        ++E+
Sbjct: 354 VASQDGYLAKVNVRPGDQVLVDDVLAQLDDDDLRLQRRKLISELQQHRHTYNNALANSER 413

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +     +   D      E  E+QL   L +
Sbjct: 414 AQATIASALVDQATIQLELIEQQLKRTLLR 443


>gi|194099567|ref|YP_002002697.1| Efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           NCCP11945]
 gi|239999771|ref|ZP_04719695.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           35/02]
 gi|240081519|ref|ZP_04726062.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           FA19]
 gi|240113798|ref|ZP_04728288.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           MS11]
 gi|240118756|ref|ZP_04732818.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           PID1]
 gi|240124295|ref|ZP_04737251.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           PID332]
 gi|193934857|gb|ACF30681.1| Efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           NCCP11945]
 gi|317165061|gb|ADV08602.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 384

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 103 NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHART 162

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 163 AVSQAQAAVKAALAEESSARAALGGDVSLRE-----------------QPEVQTAIGRLK 205

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                  +  + +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 206 DAWLNLRRTQVRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 263

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 264 MKIGQPAEL 272



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 59/186 (31%), Gaps = 11/186 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 54  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 113

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS---VYRS 163
           R +  T ++       + D+     + R    L   G   +         +S      ++
Sbjct: 114 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARTAVSQAQAAVKA 173

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQE 220
              + +  R+     + L  +  +  A+       L + +          V++  +   +
Sbjct: 174 ALAEESSARAALGGDVSLREQPEVQTAIGRLKDAWLNLRRTQVRAPADGQVAKRSVQVGQ 233

Query: 221 RIVYKS 226
           ++   +
Sbjct: 234 QVAAGA 239


>gi|195953166|ref|YP_002121456.1| efflux transporter, RND family, MFP subunit [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932778|gb|ACG57478.1| efflux transporter, RND family, MFP subunit [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 373

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 38/126 (30%), Gaps = 18/126 (14%)

Query: 292 ILSPIAGTIVYNQSFSSSN--YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           I SP  G +                  PL  IV  +    + A    K I+ +K G    
Sbjct: 190 ITSPADGVVAKLNIH-PGEKIIVDPYTPLATIV-DTSHVMVEADAFSKDIRFIKPGQEVD 247

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +    Y  +    FK  +  +  I+            Y+V + + ++     N  L+   
Sbjct: 248 ITTSSYPGV---DFKGKVFYVGDIVDPNTRT------YKVYINVQNI----QNF-LKPNM 293

Query: 410 PAEVLF 415
              V  
Sbjct: 294 FVNVKI 299


>gi|54303519|ref|YP_133512.1| putative multidrug resistance protein [Photobacterium profundum
           SS9]
 gi|46916949|emb|CAG23712.1| putative multidrug resistance protein [Photobacterium profundum
           SS9]
          Length = 381

 Score = 63.1 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 99/289 (34%), Gaps = 22/289 (7%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL--LRALLSSHQKDLTMMKNLFEKNAVS 212
             I+     +  + + + ++  N+L LE +S+   L+A +   Q +   ++ L  +    
Sbjct: 64  DSINVEDTQVVTQGSELLTLNRNKLALEQQSAEANLKATVRQVQSNYIKIEQLKAQIQAE 123

Query: 213 QNDLNQQERIVYKSTLE------LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +    Q ++   +          L E +   KN +    +     N +       + ++ 
Sbjct: 124 KIAYKQAKQDYNRRIGGDKDGSVLPEVLAHAKNAVNISAQNIVVLNKQLEASEVLLPKEQ 183

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
             +       +S L  +   +   TI++P  G I   ++       Q  Q LM +VP + 
Sbjct: 184 LLDNPQVEAAISTLRKVYLAQVNSTIIAPKGGMIAK-RAVQVGQLIQPGQALMTLVPLNN 242

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPIISQQD 378
             +I A     Q+  ++ G   T+    Y                   +    P  +   
Sbjct: 243 -VWIEANFKETQLTDMQAGQPVTITSDLYGSKHTYTGVVAGIGAGTGSVFSAIPAQNATG 301

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT--LAQE 425
           N ++  +   V + +  + F  + + +  G   +V    ++TT      
Sbjct: 302 NWIKVIQRVPVRIYVDPVQFKTHPLRI--GMSMKVTVDTESTTNQPFDY 348



 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 63/184 (34%), Gaps = 19/184 (10%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE--------------TTDLID 97
                V I S   G I    VE+   + QG+ LLT    +              T   + 
Sbjct: 48  VAGQQVIITSQEPGTIDSINVEDTQVVTQGSELLTLNRNKLALEQQSAEANLKATVRQVQ 107

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              + I+ L+  I  EK  + +   K D   +    ++  +L  +  +      +    I
Sbjct: 108 SNYIKIEQLKAQIQAEK--IAYKQAKQDYNRRIGGDKDGSVLPEVLAHAKNAVNISAQNI 165

Query: 158 SSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRAL-LSSHQKDLTMMK-NLFEKNAVSQN 214
             + + L+     + +   L+   +E   S LR + L+     +   K  +  K AV   
Sbjct: 166 VVLNKQLEASEVLLPKEQLLDNPQVEAAISTLRKVYLAQVNSTIIAPKGGMIAKRAVQVG 225

Query: 215 DLNQ 218
            L Q
Sbjct: 226 QLIQ 229


>gi|297180154|gb|ADI16376.1| membrane-fusion protein [uncultured bacterium HF130_12L15]
          Length = 378

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 87/252 (34%), Gaps = 28/252 (11%)

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           ++   R+I ++     ++ + L A      ++L + K     N V + DL      + + 
Sbjct: 63  RVEHARAIRISGTTEADQRTRLAARTGGIIEELAVQKG----NRVEKGDL------ILRL 112

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             E ++   E    +    +   +A    A         L+  +   A   S+L   +  
Sbjct: 113 ETEGKQAAVEMAEAMLSQRQAELDAAERLAKSGNVAKLQLDSARTGLATAQSQLEAAKAE 172

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            ++  I +P +G +         +  QQ   +  I+    +  +  +V    + +V  G 
Sbjct: 173 FDRIEIRAPFSGLVDSVPV-EEGSSLQQGAEVATILNLDPILAV-GEVGEVSLGYVGVGD 230

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            A VR      +  ++ +  I  I    S Q    +            ++A  + +  + 
Sbjct: 231 KADVRL-----VDGQRVEGTIRYISRDASAQTRTFRV-----------EVAIPNEDASIP 274

Query: 407 NGFPAEVLFTAK 418
            G  AE+   A+
Sbjct: 275 AGMTAEITLRAE 286



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 55/154 (35%), Gaps = 5/154 (3%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           ++  SG    +     + +   GII++  V+ G+++ +G  +L  E       +++ +  
Sbjct: 69  AIRISGTTEAD-QRTRLAARTGGIIEELAVQKGNRVEKGDLILRLETEGKQAAVEMAEAM 127

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   +  +D      + L    +V +   +S    L     +  +  ++     I + + 
Sbjct: 128 LSQRQAELDA----AERLAKSGNVAKLQLDSARTGLATAQSQLEAAKAEFDRIEIRAPFS 183

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            L   +       L +         L  +L+  +
Sbjct: 184 GLVDSVPVEEGSSLQQGAEVATILNLDPILAVGE 217


>gi|260432597|ref|ZP_05786568.1| secretion protein HlyD family protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260416425|gb|EEX09684.1| secretion protein HlyD family protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 419

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 50/159 (31%), Gaps = 1/159 (0%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V I     G + +  V N   +  G P+   ED      ++     I  ++  +   +
Sbjct: 82  RTVTILPQLGGRVSEVYVTNNQTVTAGQPIFRIEDFTQKAQVEAAHAQIAQIQASLKVAE 141

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           + L          + A +   E L           S V    I  +   +  +  ++R+ 
Sbjct: 142 TDLAEAEAGIAAAKAALDQALEDLERNTTLRDEGSSAVRLAEIDRLENLVAERQAQVRAA 201

Query: 175 YLNRLDLENKSSLL-RALLSSHQKDLTMMKNLFEKNAVS 212
              +  +  +   L  A L+S    L       +K  VS
Sbjct: 202 ESKKAAVVQQIEELIPAQLASANAQLDAALAELDKTVVS 240



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 48/160 (30%), Gaps = 20/160 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             + + +  +      ++    +  + E   +  +A L    +DL     L ++ + S  
Sbjct: 121 AQVEAAHAQIAQIQASLKVAETDLAEAEAGIAAAKAALDQALEDLERNTTLRDEGS-SAV 179

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L + +R +     E +  +   ++    + +  +E                       A
Sbjct: 180 RLAEIDR-LENLVAERQAQVRAAESKKAAVVQQIEELIP-----------------AQLA 221

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              ++L       ++  + + + G +         +Y   
Sbjct: 222 SANAQLDAALAELDKTVVSAGVTGRVEQFGL-QVGDYVSP 260


>gi|241764356|ref|ZP_04762383.1| efflux transporter, RND family, MFP subunit [Acidovorax delafieldii
           2AN]
 gi|241366249|gb|EER60806.1| efflux transporter, RND family, MFP subunit [Acidovorax delafieldii
           2AN]
          Length = 537

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 101/292 (34%), Gaps = 29/292 (9%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +D++  Y     +           + K++   +R+  +N   L+        +    ++ 
Sbjct: 78  MDYIAVYEGAQEEAETNSNQIRISTEKIQKLGVRTEAVNLRSLDKVVRAAGRIEPDERQT 137

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTL-------ELRENIHEQKNMLRHINELYDEA 251
            T+      +  V +  +N   + V K          EL     E     + ++ L D A
Sbjct: 138 FTIAAKF--EGYVERLHVNVTGQAVSKGQPLFDVYSPELVSAQREYAIAAQGVDALKD-A 194

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILE---KTREQKTILSPIAGTIVYNQSFSS 308
           + E    ++E++       R +     ++  L      R   T  SP++G I   ++   
Sbjct: 195 SGEAQRGMRELADSSLARLRNWDISDEQVKTLAKSGDARRTLTFRSPVSGIITEKKAV-Q 253

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  + L ++   S +  I A V  + I  VK G  A V+   Y D   K F+  + 
Sbjct: 254 GMRFMPGEMLYQVANLSSVWVI-ADVFEQDIGLVKSGGKAKVQINAYPD---KVFQGTVS 309

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + P +  +           V +++     ++    L+ G  A+V     + 
Sbjct: 310 YVYPTLRPETRT--------VQVRVD---LANTGGLLKPGMFAQVELPTASK 350



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 64/184 (34%), Gaps = 10/184 (5%)

Query: 40  IEISVSSSGEILNE-DNVVEIKSPFSGIIKKFQVE-NGSQILQGTPLLTF---EDIETTD 94
           ++  V ++G I  +      I + F G +++  V   G  + +G PL      E +    
Sbjct: 120 LDKVVRAAGRIEPDERQTFTIAAKFEGYVERLHVNVTGQAVSKGQPLFDVYSPELVSAQR 179

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
              +    +  L+      +  +  L +      + ++  +EQ+        +  +  F 
Sbjct: 180 EYAIAAQGVDALKDASGEAQRGMRELADSSLARLRNWDISDEQVKTLAKSGDARRTLTFR 239

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +S +    K  +  MR +    L      S +  +    ++D+     L +    ++ 
Sbjct: 240 SPVSGIITE-KKAVQGMRFMPGEMLYQVANLSSVWVIADVFEQDIG----LVKSGGKAKV 294

Query: 215 DLNQ 218
            +N 
Sbjct: 295 QINA 298


>gi|146306711|ref|YP_001187176.1| RND family efflux transporter MFP subunit [Pseudomonas mendocina
           ymp]
 gi|145574912|gb|ABP84444.1| efflux transporter, RND family, MFP subunit [Pseudomonas mendocina
           ymp]
          Length = 360

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 81/268 (30%), Gaps = 28/268 (10%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                ++ V           R   +       +   LRA +S   + L   K        
Sbjct: 42  AAAADLARVEVQWLQAEPMQRQHVVQGQIEAWRRVELRAQVSGSVQSLDQDKG------- 94

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             N +  ++ ++  S  +    +   +  +R   E    A           + +L + + 
Sbjct: 95  --NRVAAEQLLLSLSPDDRPAQVARSEADVRQ-RESDVTAAKRLRERNLISANELMRLES 151

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             A   ++L           I +P AG I   ++    ++ Q  Q L+ +V       + 
Sbjct: 152 ELAKARAELDSARLQLRNTKIRAPFAG-IYDQRTVELGDFVQPGQSLLTLV-DIDRLKVS 209

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A++  +Q+  ++ G    V       +  +  +  +  I         +      + + +
Sbjct: 210 AQIAQQQVTQLELGQPVKVEL-----LDGRTLEGELHFIAAAADPGSRS------FRIEV 258

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
           K+     +   + L  G  A +      
Sbjct: 259 KVD----NPGGLRL-AGASATLHIQTGE 281


>gi|83815115|ref|YP_445308.1| putative membrane efflux protein [Salinibacter ruber DSM 13855]
 gi|83756509|gb|ABC44622.1| putative membrane efflux protein [Salinibacter ruber DSM 13855]
          Length = 440

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 80/259 (30%), Gaps = 28/259 (10%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           R R+      +L      + A    + +    +  L  +    +  + Q E  +  +  E
Sbjct: 48  RARNQTAIYSELSQPVVAVEAQTGDYVEKGEPLVRL--RRVTYEQQVRQAEAALRTAKAE 105

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLK---------EISRDLEQNQRTFADEMSKL 280
            +      + +   +      A+ +F +  +         +     EQ Q       S L
Sbjct: 106 AQGAQANLRGLRSQLKRTERLADQDFESQQQLESLRAQVEQAEATYEQAQAQVEQAESTL 165

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              E T  +  + +PI+G +   ++            L  I        +  +VT +   
Sbjct: 166 QERETTLRRTVVRAPISGHV-GQRNVQVGQRVGPDTRLYTIG-DLDSVKVNVEVTDRMFG 223

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            ++ G TA +  P    +      A + ++ P +S++         Y     I     S+
Sbjct: 224 RIRPGQTARIHVPQQDTV----LVAPVARMSPFLSEES--------YSAEAVI---EVSN 268

Query: 401 NNIELRNGFPAEVLFTAKN 419
           +   L  G   EV      
Sbjct: 269 DPRLLNPGMFVEVDVAYGE 287



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 87/256 (33%), Gaps = 23/256 (8%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +   + + G  + +G PL+    +     +   + +++  +      ++ L  L ++   
Sbjct: 63  VVAVEAQTGDYVEKGEPLVRLRRVTYEQQVRQAEAALRTAKAEAQGAQANLRGLRSQLKR 122

Query: 127 LEK----------AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            E+            ES   Q+      Y    ++V     +   R   ++ T +R+   
Sbjct: 123 TERLADQDFESQQQLESLRAQVEQAEATYEQAQAQVEQAESTLQERETTLRRTVVRAPIS 182

Query: 177 NRLDLENKSSLLRAL----------LSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIV 223
             +   N     R            L S + ++ +   +F +      ++  + QQ+ ++
Sbjct: 183 GHVGQRNVQVGQRVGPDTRLYTIGDLDSVKVNVEVTDRMFGRIRPGQTARIHVPQQDTVL 242

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                 +   + E+      + E+ ++  L       E+     +++R     +S L   
Sbjct: 243 VAPVARMSPFLSEESYSAEAVIEVSNDPRLLNPGMFVEVDVAYGESERATIVPLSALYEN 302

Query: 284 EKTREQKTILSPIAGT 299
             +  +   ++P  GT
Sbjct: 303 PGSNARGVFVAPTLGT 318


>gi|223986685|ref|ZP_03636674.1| hypothetical protein HOLDEFILI_03997 [Holdemania filiformis DSM
           12042]
 gi|223961333|gb|EEF65856.1| hypothetical protein HOLDEFILI_03997 [Holdemania filiformis DSM
           12042]
          Length = 569

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/408 (9%), Positives = 122/408 (29%), Gaps = 68/408 (16%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +++  +     SP S  + +  V  G  +  G  ++ ++     + +    + +   R  
Sbjct: 82  LVSSLSEKTYFSPVSANVAQLPVAVGDNVSAGDLIVGYDLDSIQEQVQKANLELTAARSG 141

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                +  +   ++Y   +   E    +  D   K      ++         +       
Sbjct: 142 YHDSLNKSNEKADEYSQAKHDAEKLYAEANDLRSKVAGLKDQLAQAQKEQAGQEAGNAAN 201

Query: 170 RMRSIYLN---------RLDLENKSSLLRALLSSHQKDLTMM------------------ 202
           + +   L          +  LE + +  + L++  Q +L  +                  
Sbjct: 202 QQKIAELQKEAADLETTQAQLELQIAEKQRLIAEKQAELDALVNPPEPDPAASPAPIEDS 261

Query: 203 ----KNLFEKNAVSQNDLN----------QQERIVYKSTLELRENIHEQKNMLRHINELY 248
               + L ++ +  Q +L+          Q+++ +     +L+         +  +    
Sbjct: 262 SDKIEQLKQEISTLQGELDVLNKTQADNDQRQKQIADEIQQLQSAGGAAAAKVVQLQADL 321

Query: 249 DEANLEFANYLKEISRDLE--------------QNQRTFADEMSKLTILEK----TREQK 290
           ++A+ E +    E+++                 + Q      +S+L  +         + 
Sbjct: 322 EKASTELSQKETELAKRESVRDSAQASILSNEMKTQLQANTNLSELAAMSTNELLQLARA 381

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +  +G +    +        +   L+  V  ++   +   +T   ++ +  G  A +
Sbjct: 382 GIKAEFSGIVTKVNT-KEGAATAEGTELIT-VASNREVMVEISITKYDLEKIAVGQKAEI 439

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
               +           +EKI   +++ +       + +V     D   
Sbjct: 440 TLAGHQYT------GTVEKISR-VAEANAQGTPVIHAQVRFDNPDDNI 480


>gi|323701548|ref|ZP_08113221.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           nigrificans DSM 574]
 gi|323533557|gb|EGB23423.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           nigrificans DSM 574]
          Length = 385

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 54/157 (34%), Gaps = 16/157 (10%)

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L      L   Q       + L   +    +  + +PI+G +           A  + P+
Sbjct: 167 LASAKAALNSAQSQVTVAQAGLQKAQVAYNESLVTAPISGVVTARNVN-PGEMATTTSPV 225

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + IV +     ++A V  +Q+  +K G    VR      + EK  +  +  I      Q 
Sbjct: 226 VTIV-NLDKVVVKASVNEEQVNKLKTGEKVMVRVAA---VSEKPLEGKVTNISLAADPQT 281

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   Y V +++      +    L+ G  AEV+ 
Sbjct: 282 KA------YTVKVQLD-----NPQHLLKPGMFAEVMV 307



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 55/154 (35%), Gaps = 8/154 (5%)

Query: 47  SGEILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            G I     +  ++S        G +    V+ GS +  G  LL+ +  +    +   + 
Sbjct: 46  QGTIGITGKIEAVQSANVVCKVPGKVASISVDIGSTVTAGQLLLSLDARDLAAAVTQAEA 105

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF---LGKYHSTCSKVFNYGIS 158
           S+   +  ++T ++A++     YD  +K ++   E +        ++ +   K +    +
Sbjct: 106 SVAAAQAQVETARAAIETAQVTYDAAKKNYDRGLELVKAQAISQYEFDNNYEKPYKLAQT 165

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            +  +     +    + + +  L+         L
Sbjct: 166 GLASAKAALNSAQSQVTVAQAGLQKAQVAYNESL 199


>gi|157961662|ref|YP_001501696.1| multidrug resistance efflux pump-like protein [Shewanella pealeana
           ATCC 700345]
 gi|157846662|gb|ABV87161.1| Multidrug resistance efflux pump-like protein [Shewanella pealeana
           ATCC 700345]
          Length = 363

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 96/265 (36%), Gaps = 30/265 (11%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             I S    L+  L R+++   ++  +E  + LL+A     Q  L + K + + +  +  
Sbjct: 116 SEIDSRIEQLEGSLLRVKAQEQSQ-SIELNAQLLQAEFELKQAKLELEKAVLDASVPADF 174

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                  I  K   + + N  + ++ L   ++   E   +    L ++S D ++ +   A
Sbjct: 175 -------IAAKDYADFQFNKLKAESELSKKHQALAEIQDKRKASLSQLSIDKQRAELELA 227

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVY------NQSFSSSNYAQQSQPLMKIVPHSKLT 328
             +          EQ  I + IAG ++Y      ++ ++  + A+  + ++ I P     
Sbjct: 228 QAL-------LGLEQLEIRADIAGPVLYSRDPWTDKKYAVGDNARIGRQVVTI-PALNNL 279

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            I A V    +  +K G    +R        +      +  +     +Q     +  +  
Sbjct: 280 EIIAWVNEVDVDRIKLGEPVRLRL---DSQTQVTLSGNVADVSRQAKKQPAWGNSNWF-- 334

Query: 389 VILKITDLAFSDNNIELRNGFPAEV 413
              +++     D  +E+  G    V
Sbjct: 335 ---RVSIKFKVDKRVEIIPGMSVLV 356


>gi|91202336|emb|CAJ75396.1| similar to cobalt-zinc-cadmium resistance protein CzcB [Candidatus
           Kuenenia stuttgartiensis]
          Length = 491

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 100/287 (34%), Gaps = 32/287 (11%)

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             +++ +    +      +VF      V    K+ L     +   R D    +++L+   
Sbjct: 156 PNQDRFVIVSPRISGVVKEVFVDWGDQVKEGQKLALLDSIELGEARADYLKAAAMLKLAE 215

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            ++ ++    K L+ KN  S       E    +S +EL             + E      
Sbjct: 216 KNYSRE----KELYGKNITSGKHFFDAENAHEQSHIELNA-----------LMEKLLLMG 260

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            E  +  +   + L  +Q    D        +      T+ +P  GT++  +  +     
Sbjct: 261 QEEGSIRQMQEKLLLMDQEEV-DIKHTAKAEKHVSSLFTLTAPFDGTVIDKKV-AVGELK 318

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P++ I       ++   V  K I  V+ G  A V    Y    E++F+  +  I  
Sbjct: 319 NAFDPMLTIA-DLTQLWVWFDVYEKDIPKVRMGNKAMVSVASYP---EEQFEGNVTYIGN 374

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            I ++   +      +V +++     ++++ +L+ G  A VL    +
Sbjct: 375 TIDEKTRTV------KVRIEV-----ANHHEKLKPGMFARVLLQVDD 410



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 69/177 (38%), Gaps = 26/177 (14%)

Query: 39  PIEISVS--SSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           P++I ++  ++GE+    +   I SP  SG++K+  V+ G Q+ +G  L   +       
Sbjct: 141 PMDIGITHEATGEVGPNQDRFVIVSPRISGVVKEVFVDWGDQVKEGQKLALLD------S 194

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           I+L +     L+     +             L +   SRE++L       + T  K F  
Sbjct: 195 IELGEARADYLKAAAMLK-------------LAEKNYSREKELY----GKNITSGKHFFD 237

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
             ++  +S       M  + L   +  +   +   LL   Q+++ +      +  VS
Sbjct: 238 AENAHEQSHIELNALMEKLLLMGQEEGSIRQMQEKLLLMDQEEVDIKHTAKAEKHVS 294


>gi|86145807|ref|ZP_01064136.1| hypothetical secretion protein [Vibrio sp. MED222]
 gi|85836506|gb|EAQ54635.1| hypothetical secretion protein [Vibrio sp. MED222]
          Length = 373

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 78/250 (31%), Gaps = 24/250 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +  QL++   K        +   +    ++L++    + +   +    + K +       
Sbjct: 79  QPNQLVNQGDKLAILDESDYQIAVQQAEQNLEIAGQNVGAQTASIASAQAKLTSAIVERQ 138

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + +     +  + +K  VS++D ++    +  S   +     +     + + +  +E + 
Sbjct: 139 NTKLQAKRVLEMADKGVVSKSDADKARAALATSRAAVVNAEADLDRAKKQMGKEGEENSQ 198

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A  L                    L   +   E+  I +P  G +  N S S   YA 
Sbjct: 199 VKAALLA-------------------LEQAQLNLERTVITAPTQGGV-SNFSLSEGFYAS 238

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q +M  V      +I A      + +V  G    V          K  K  +  ID  
Sbjct: 239 AGQAIMTFVSTED-IWIEAYYRENSLGNVTVGDEVEV---ALDFAPGKVVKGRVSSIDWG 294

Query: 374 ISQQDNNLQT 383
           +    N+   
Sbjct: 295 VDWGQNDQAG 304



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 70/195 (35%), Gaps = 10/195 (5%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++++T   ++ +  ++ +SI+   +  +  +     +  +V IK   SG +    V+   
Sbjct: 25  VRKVTNYLLLFVAFMLIFSIIS--DRIIPITDNARVKGYIVPIKPEVSGKVLDILVQPNQ 82

Query: 77  QILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            + QG  L   ++        +    +++   ++      I + ++ L     +     K
Sbjct: 83  LVNQGDKLAILDESDYQIAVQQAEQNLEIAGQNVGAQTASIASAQAKLTSAIVERQNT-K 141

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               R  ++ D      S   K      +S    +  +    R+      + E  S +  
Sbjct: 142 LQAKRVLEMADKGVVSKSDADKARAALATSRAAVVNAEADLDRAKKQMGKEGEENSQVKA 201

Query: 190 ALLSSHQKDLTMMKN 204
           ALL+  Q  L + + 
Sbjct: 202 ALLALEQAQLNLERT 216


>gi|104782057|ref|YP_608555.1| HlyD family secretion protein [Pseudomonas entomophila L48]
 gi|95111044|emb|CAK15764.1| putative HlyD family secretion protein [Pseudomonas entomophila
           L48]
          Length = 397

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 72/216 (33%), Gaps = 22/216 (10%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + +    L   + ++R +Y N   L+ +    +A L   Q++    K L +  A++Q + 
Sbjct: 101 LQAAEAKLARTVRQVRGLYSNVDSLKAQLETRQAELQKAQQNYNRRKVLADSGAIAQEE- 159

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
                            I   ++ L       + A  +       +   +  +       
Sbjct: 160 -----------------IAHSRDDLAVAQAALNSARQQLNTSTALVDDTVVSSHPEVMAA 202

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + L        + T+++P+ G +   ++       Q     M ++P  +  +I A    
Sbjct: 203 AADLRQAYLDHARTTLVAPVTGYVAK-RTVQLGQRLQPGTATMAVIPLDE-VWIDANFKE 260

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            Q++ ++ G    +         E K+   ++ +  
Sbjct: 261 TQLRDMRIGQPVEI--SADLYGSEVKYNGTVDSLGA 294


>gi|78047057|ref|YP_363232.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78035487|emb|CAJ23132.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 397

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 83/268 (30%), Gaps = 28/268 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y      + + S     L S + D    KNL    A+S 
Sbjct: 97  EVALQQAEANLAKTVRQVRGLYRTVEGAQAELSAREVTLRSARSDFARRKNLAATGAISN 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      +  +   +  +    +     +++                      NQ   
Sbjct: 157 EELAHARDELAAAEAAVSGSRESLERNRALVDDSA------------------VANQPDV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L        +  +++P++G +   +S       Q    LM +VP  +  ++ A 
Sbjct: 199 QTAAAQLRQAYLNHARTGVVAPVSGYVAR-RSAQVGQRVQPGSVLMAVVPL-EQVWVEAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----E 385
               Q++H++ G    +    Y        + +++ +            N         +
Sbjct: 257 FKETQLKHMRLGQEVELHSDLYGGGVSYTGRIQSLGLGTGSAFSLLPAQNASGNWIKIVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
              V + +     + N + +      +V
Sbjct: 317 RVPVRIAVDSKQLASNPLRIGLSMKVDV 344



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 76/215 (35%), Gaps = 21/215 (9%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSP 62
                  A+L+ + ++ I+ IIGL+ W  L+       + +         + N V+I   
Sbjct: 14  AAPSKRRAALRIVAIVVILAIIGLVVWYFLVGRWHEDTDDA-------YVQGNQVQITPM 66

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +     E+G ++ +G  L+  +  +T       +V+++    ++      +  L  
Sbjct: 67  VGGTVVSIGAEDGMRVERGQLLVQLDPADT-------EVALQQAEANLAKTVRQVRGLYR 119

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLD 180
             +  +    +RE  L      +    +      IS   +  +         ++  +R  
Sbjct: 120 TVEGAQAELSAREVTLRSARSDFARRKNLAATGAISNEELAHARDELAAAEAAVSGSRES 179

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           LE   +L+     ++Q D+        +  ++   
Sbjct: 180 LERNRALVDDSAVANQPDVQTAAAQLRQAYLNHAR 214


>gi|262374952|ref|ZP_06068186.1| efflux transporter [Acinetobacter lwoffii SH145]
 gi|262309965|gb|EEY91094.1| efflux transporter [Acinetobacter lwoffii SH145]
          Length = 444

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 91/258 (35%), Gaps = 23/258 (8%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++R +Y+   D   +  L+  + S  Q++     +L    A  +N + Q   +   +  +
Sbjct: 61  QVRKMYVELGDQVKQGQLIARIDSVRQEN-----DLKTAEASIKNQMAQL-AVRQANLAK 114

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +    + QK M         E    FANY K    D+             L   ++    
Sbjct: 115 VEAEYNRQKAMYAQDATSRSELESAFANY-KTAQADITAINAQIEQSRLTLATAKEDLGY 173

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYT 347
             I++P+ GTIV             +Q    IV  +      I+A+++   +  V++G  
Sbjct: 174 TQIVAPMDGTIVAI-VTEEGQTVNANQSAPTIVKLAKLDTMTIKAEISEADVMKVEEGQ- 231

Query: 348 ATVRFPHYA------DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
            TV F            + ++ +     I+   +   ++  +  YY  +  +      + 
Sbjct: 232 -TVYFTTLGNNEKKIYAKLRQVEPAPNSINTDSNTSSSSSSSAVYYNALFDVP-----NE 285

Query: 402 NIELRNGFPAEVLFTAKN 419
           + +LR    A+V      
Sbjct: 286 DGKLRIDMTAQVYIVLDE 303



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 54/127 (42%), Gaps = 3/127 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G +     +V + +  SG ++K  VE G Q+ QG  +   + +   + +   
Sbjct: 36  IESSVLATGILEA-TKMVSVGAQVSGQVRKMYVELGDQVKQGQLIARIDSVRQENDLKTA 94

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + SIKN    +   ++ L  +  +Y+  +  +        +    + +   K     I++
Sbjct: 95  EASIKNQMAQLAVRQANLAKVEAEYNRQKAMYAQDATSRSELESAFANY--KTAQADITA 152

Query: 160 VYRSLKM 166
           +   ++ 
Sbjct: 153 INAQIEQ 159


>gi|317054570|ref|YP_004118595.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
 gi|316952565|gb|ADU72039.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
          Length = 341

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 76/273 (27%), Gaps = 18/273 (6%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +          +L      + +      D+     L  A ++     +   + L EK A 
Sbjct: 72  LVRLDARDYQAALMQASGEVEAQQAALADIAATRELQLATIAGSAAAVNAAQALTEKTAG 131

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE-QNQ 270
                    + V   T     +  +         E    A+   A     +    E Q Q
Sbjct: 132 DNRRYGALVQTVSAQT----RDYAQADYRQAVAQESKARADKSVAERQLGVLDAREKQTQ 187

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  + L + +       I +P  G I  N+   S  Y      L+ +VP     ++
Sbjct: 188 AALIQAQAGLEMAKLNLGYTEIRAPFDGVI-GNRRAWSGAYVSSGTQLLSLVPAQG-LWV 245

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQ 382
            A     Q+ H++ G  A +            F   +  + P          ++      
Sbjct: 246 DANFKENQLAHLQAGQQAQIVADVLPGRT---FTGHVVSLSPATGSRFSILPAENATGNF 302

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           T+    V ++I     +     LR G    V  
Sbjct: 303 TKIVQRVPVRIALDGDAAKLGLLRPGLSVTVTV 335


>gi|229093665|ref|ZP_04224765.1| multidrug resistance protein A [Bacillus cereus Rock3-42]
 gi|228689752|gb|EEL43559.1| multidrug resistance protein A [Bacillus cereus Rock3-42]
          Length = 211

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ +D  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 51  KLTDWKAEVGKDYNEN-----DKLGAVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 104

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 105 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LSGKVEQVGL 160

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 161 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 210


>gi|84623547|ref|YP_450919.1| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|84367487|dbj|BAE68645.1| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 397

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 82/268 (30%), Gaps = 28/268 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y +    + + S     L S + D    K+L    A+S 
Sbjct: 97  EGAVQQAEANLAKTVRQVRGLYRSVEGAQAELSAREVALRSARSDFARRKDLAATGAISN 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L                     ++ L         +   F      +      NQ   
Sbjct: 157 EEL------------------AHARDELAAAEAAVSGSRESFERNRALVDDSAVANQPDV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L        +  +++P++G +   ++       Q    LM +VP  +  ++ A 
Sbjct: 199 QTAAAQLRQAYLNHARTGVVAPVSGYVAR-RAAQVGQRVQPGSVLMVVVPL-EQVWVEAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----E 385
               Q++H++ G    +    Y        + +++ +            N         +
Sbjct: 257 FKETQLKHMRLGQEVELHSDLYGGGVSYTGRIQSLGLGTGSAFSLLPAQNASGNWIKIVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
              V + +     + N + +      EV
Sbjct: 317 RVPVRIAVDSKQLASNPLRIGLSMKVEV 344



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 69/199 (34%), Gaps = 14/199 (7%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSP 62
                  A+L+ + +++I+ IIGL+ W  L+       + +         + N V+I   
Sbjct: 14  AAPSKRRAALRIVAIVAILAIIGLVVWYFLVGRWHEDTDDA-------YVQGNQVQITPM 66

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +     E+G ++ +G  L+  +  +T   +   + ++      +     +++    
Sbjct: 67  VGGTVVSIGAEDGMRVERGQLLVQLDPADTEGAVQQAEANLAKTVRQVRGLYRSVEGAQA 126

Query: 123 KYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +    E A  S          L    +  ++   +    +  +         S   NR  
Sbjct: 127 ELSAREVALRSARSDFARRKDLAATGAISNEELAHARDELAAAEAAVSGSRESFERNRAL 186

Query: 181 LENKSSLLRALLSSHQKDL 199
           +++ +   +  + +    L
Sbjct: 187 VDDSAVANQPDVQTAAAQL 205


>gi|238755719|ref|ZP_04617053.1| Multidrug resistance protein A [Yersinia ruckeri ATCC 29473]
 gi|238706086|gb|EEP98469.1| Multidrug resistance protein A [Yersinia ruckeri ATCC 29473]
          Length = 394

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 69/182 (37%), Gaps = 3/182 (1%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
              ++    +  L N       L+ + ++    ++    +   +QNDL ++E I+     
Sbjct: 100 DAEQAFERAKTALANSVRQTHQLVINGKQYQANIELRKTELNKAQNDLKRRE-ILGAVDA 158

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             RE +   ++ +       D A  ++      +     + Q       +++       +
Sbjct: 159 IGREEVQHARDAVDAAKATLDVAIQQYNANQALVLTTPLEKQPAIEQAAAQMRDAWLALQ 218

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  ILSP+ G +   +S           PLM +VP +   ++ A     Q+ +++ G  A
Sbjct: 219 RTKILSPMTGYVSR-RSVQVGAEISSGTPLMAVVPAN-QLWVDANFKETQLANMRIGQPA 276

Query: 349 TV 350
           T+
Sbjct: 277 TI 278



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 56/160 (35%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N V+I S   G +     EN   +  G  L+T +  +     +  K ++ N      
Sbjct: 61  VSGNQVQIMSQVPGSVVSVNFENTDLVKSGDVLITLDPTDAEQAFERAKTALANSVRQTH 120

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I+ ++   +    K ++ +   + +  ++L  +        +     + +   +L +
Sbjct: 121 QLVINGKQYQANIELRKTELNKAQNDLKRREILGAVDAIGREEVQHARDAVDAAKATLDV 180

Query: 167 KLTR--MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            + +       +    LE + ++ +A        L + + 
Sbjct: 181 AIQQYNANQALVLTTPLEKQPAIEQAAAQMRDAWLALQRT 220


>gi|126175733|ref|YP_001051882.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS155]
 gi|125998938|gb|ABN63013.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS155]
          Length = 416

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 73/240 (30%), Gaps = 35/240 (14%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-- 262
            +K   ++Q D   Q+  +  +   L+    + +     I +   E + +      +   
Sbjct: 89  VKKGDLIAQIDSLAQQNNLKDALASLKSINAQFRAKQAQIRQAKLEFSRQQQMLADKASS 148

Query: 263 --------------SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                           +LEQ +         +           I +P+ GT+VY+     
Sbjct: 149 RADYEVADANLTVYQAELEQLEAQKQQAEINVDSARIDLGYTKITAPMDGTVVYSAV-EV 207

Query: 309 SNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                 +Q    IV         ++A+++   + +V  G      F          ++ I
Sbjct: 208 GQTVNANQTTPTIVEMAQLDTMTVKAQISEADVVNVHPGQAVY--FTVLGKPNHP-YRGI 264

Query: 367 IEKIDP-------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  I+P         S   ++     YY  +  +      + +  LR G  A+V      
Sbjct: 265 LRAIEPGPISMDGDDSNMSSSDSDAIYYHGLFDV-----ENPDRTLRIGMTAQVSIVLAK 319



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G +     +V + +  SG I    +  G ++ +G  +   + +   + +   
Sbjct: 52  IENSVLANGMLQAS-KLVSVGAQVSGQILSLPLALGDEVKKGDLIAQIDSLAQQNNLKDA 110

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             S+K++      +++ +           K   SR++Q+L       +   +V +  ++ 
Sbjct: 111 LASLKSINAQFRAKQAQI--------RQAKLEFSRQQQMLADKASSRADY-EVADANLTV 161

Query: 160 VYRSLKMKLTRMRSIYLN 177
               L+    + +   +N
Sbjct: 162 YQAELEQLEAQKQQAEIN 179


>gi|146283679|ref|YP_001173832.1| CzcB family heavy metal RND efflux membrane fusion protein
           [Pseudomonas stutzeri A1501]
 gi|145571884|gb|ABP80990.1| heavy metal RND efflux membrane fusion protein, CzcB family
           [Pseudomonas stutzeri A1501]
 gi|327482063|gb|AEA85373.1| CzcB family heavy metal RND efflux membrane fusion protein
           [Pseudomonas stutzeri DSM 4166]
          Length = 545

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 66/190 (34%), Gaps = 22/190 (11%)

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L  N  +Q             A+L ++   +  + D+ + Q      + +L    K    
Sbjct: 212 LIANAGQQSLAGGSAAAQKGLASLSYSALERLRNWDIGEAQ------LERLRRTGKVTRT 265

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            TI +P+ G ++   S       Q    L +I     +  I A+V  + +  V+ G  A 
Sbjct: 266 LTIAAPVDGVVLDKPSV-EGMRFQPGDALYRIADLDTVWLI-AEVFEQDLALVQLGQKAQ 323

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +    Y D R   F+  +  + P +S +           V +++T    + + + L+   
Sbjct: 324 LTVSAYPDRR---FRGEVTFVYPDLSPETRTA------RVRIELT----NPDGL-LKPAM 369

Query: 410 PAEVLFTAKN 419
                  A  
Sbjct: 370 FGTAQLAAGE 379


>gi|145299911|ref|YP_001142752.1| HlyD family secretion protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142852683|gb|ABO91004.1| secretion protein, HlyD family [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 387

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 89/270 (32%), Gaps = 35/270 (12%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN--AVSQNDLNQQERIVYKSTLELR 231
             + ++D+  + S     L+          +L  +    ++QN+L   E  +     +L+
Sbjct: 55  QAIEQVDVGAQVSGQVTYLAVEAGQSVKQGDLLAEIDPLIAQNNLKTAEADLASRRAQLK 114

Query: 232 ENIHE--------QKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFADEMSKLTI 282
               +        ++       E    A+LE A     +   +L+  Q    + + K+  
Sbjct: 115 IKQAQLKQNELAWRRQQQMFKQEASSRADLESAEAQLAVTRAELQSAQAEIENALIKVDR 174

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM--KIVPH------SKLTYIRAKV 334
            +       IL+P+ GT+V           +Q Q L   + VP        +   ++A++
Sbjct: 175 TKTELGYNRILAPMDGTVVSI-------VTRQGQTLAASQTVPTLLKLANLETMTVKAQI 227

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE----YYEVI 390
           +   +  VK G          AD R       +E     I++Q  +         YY  +
Sbjct: 228 SEADVTRVKAGMPVYFTLMGDADTRYHGTLRTVELAPTNINEQATSTTATSNAAVYYYAL 287

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +      + +  LR     +V       
Sbjct: 288 FDVP-----NPDHTLRVAMTTQVTIVLGER 312



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 11/129 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V +SG +   + V ++ +  SG +    VE G  + QG  L   + +   + +   
Sbjct: 44  VEQTVLASGVLQAIEQV-DVGAQVSGQVTYLAVEAGQSVKQGDLLAEIDPLIAQNNLKTA 102

Query: 100 KVSIKNLRCHIDTEKSAL----------DFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +  + + R  +  +++ L            +  +        ES E QL     +  S  
Sbjct: 103 EADLASRRAQLKIKQAQLKQNELAWRRQQQMFKQEASSRADLESAEAQLAVTRAELQSAQ 162

Query: 150 SKVFNYGIS 158
           +++ N  I 
Sbjct: 163 AEIENALIK 171


>gi|91215051|ref|ZP_01252023.1| Secretion protein HlyD [Psychroflexus torquis ATCC 700755]
 gi|91186656|gb|EAS73027.1| Secretion protein HlyD [Psychroflexus torquis ATCC 700755]
          Length = 396

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 98/280 (35%), Gaps = 19/280 (6%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           K   +E   E+  +  L+   +  +T  +  N  I ++ + L       +   +  L L 
Sbjct: 26  KEKSIEDIVENGSKAELNQKREELNTSMRKLNSQIKTLDKKLVEFEDSSKYALVEALSLA 85

Query: 183 ----NKSSLLRALLSSHQKDLTMMK--NLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
               N    ++  +++ Q  +   +   + +   V + D  ++ + + K     + +  +
Sbjct: 86  PKDFNHYVTVQGDVTTDQNIMIYPQFSGVLKDIYVKEGDQVKKGQKLAKIDDGGQSSQLK 145

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +    R +++   E      +          + +  F    + +  ++    +  I +P 
Sbjct: 146 EMKAQRELSKTRFERQERLWDENIGSEIQYLEAKTAFEQIDNAVDQMKSQLNKSVIYAPF 205

Query: 297 AGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           +G I               Q P+ +I+      Y+ A V    + ++++G  A V     
Sbjct: 206 SGKIDEI-ITDQGQVVSPGQTPIFRILNLGD-MYVSANVPENYVGNIREGSEAIVTLGA- 262

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
                K F   + ++   IS+ + N      + V + I D
Sbjct: 263 ---IGKSFVGKVSQVSSNISESNRN------FRVRVSIPD 293



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 66/175 (37%), Gaps = 5/175 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G++  + N+  I   FSG++K   V+ G Q+ +G  L   +D   +  +   K   
Sbjct: 93  VTVQGDVTTDQNI-MIYPQFSGVLKDIYVKEGDQVKKGQKLAKIDDGGQSSQLKEMKAQR 151

Query: 104 KNLRCHIDTEKSALDF-LNNKYDVLEK--AFESREEQLLDFLGKYHSTC-SKVFNYGISS 159
           +  +   + ++   D  + ++   LE   AFE  +  +     + + +     F+  I  
Sbjct: 152 ELSKTRFERQERLWDENIGSEIQYLEAKTAFEQIDNAVDQMKSQLNKSVIYAPFSGKIDE 211

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
           +       ++  ++     L+L +         +         + +    A+ ++
Sbjct: 212 IITDQGQVVSPGQTPIFRILNLGDMYVSANVPENYVGNIREGSEAIVTLGAIGKS 266


>gi|326334417|ref|ZP_08200629.1| HlyD family secretion protein [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325693384|gb|EGD35311.1| HlyD family secretion protein [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 310

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 97/268 (36%), Gaps = 32/268 (11%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +       V  ++     + ++       + ++  + RA L+  +++LT  +NL    A 
Sbjct: 67  LLKIQKEQVEATIASLKEKTQNPADQVALIRSQLEVQRAQLAQQERELTRTQNLVRGGAA 126

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q  L+                      ++  + +       +    L  I+        
Sbjct: 127 TQKQLDDL------------------SALIDQLRKQIAVTENQLKVSLTNINTQNRNVLS 168

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             A        +++   Q  I++PIAGT++ N +          +PL KI  ++ +  ++
Sbjct: 169 QEAPLQKNAEAVQEQINQGEIINPIAGTVLTNYAL-KGEMQTFGKPLYKIA-NTDVLTLK 226

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----Y 386
           A +T  Q+  +K G   TVR         + ++  I  I          +QT+       
Sbjct: 227 AYITGDQLSQIKLGQQVTVRTDA-GKGAYRTYQGEIIWISQKSEFTPKTIQTKSERANLV 285

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVL 414
           Y + +K+ + +F      L+ G   EVL
Sbjct: 286 YAIKIKVKNDSF------LKIGMYGEVL 307


>gi|154490314|ref|ZP_02030575.1| hypothetical protein PARMER_00547 [Parabacteroides merdae ATCC
           43184]
 gi|154088925|gb|EDN87969.1| hypothetical protein PARMER_00547 [Parabacteroides merdae ATCC
           43184]
          Length = 458

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 78/222 (35%), Gaps = 19/222 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI--NELYDEANLEFANYLKEISRDL 266
             +++ D    +  +  +  +L  +  E +   ++   N++  E  L   +  +  + + 
Sbjct: 133 QLIAEMDKVNLKAELASAEAQLASSKSEFEYQQKNYARNKILFEKKLISDSDYETSTYNY 192

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ +  +    + +  + +  E  TI SPI G +V N++               L  I  
Sbjct: 193 EKAKAAYEQNQAAMVKVNRNLEYATITSPIDG-VVINRAVEEGQTVAAGFETPTLFTIAA 251

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQD 378
                 + A V    I +V+ G   +     Y +     F+  + +I     +   S   
Sbjct: 252 DLTKMQVIADVDEADIGNVENGQRVSFTVDAYPND---VFEGTVMQIRLGDSESTSSSSS 308

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +  T   YEV++        + +++L+    A V       
Sbjct: 309 TSTSTVVTYEVVISAD-----NPDLKLKPRLTANVTIFTLER 345



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/114 (11%), Positives = 38/114 (33%), Gaps = 18/114 (15%)

Query: 18  KRMTLLSIIGIIGLITWSILLP-----------------IEISVSSSGEILNEDNVVEIK 60
           K +  +  + ++    W                      I  +V+++G +     V E+ 
Sbjct: 53  KLIIGIVGVLVVAGGIWFFTGKTSKGGIRLETAKVGRSSISNTVTATGTVEPVTEV-EVG 111

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           +  SGII K   +    +  G  +   + +     +   +  + + +   + ++
Sbjct: 112 TQVSGIIDKLYADYNDVVKAGQLIAEMDKVNLKAELASAEAQLASSKSEFEYQQ 165


>gi|221064869|ref|ZP_03540974.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
 gi|220709892|gb|EED65260.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
          Length = 431

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/244 (11%), Positives = 71/244 (29%), Gaps = 7/244 (2%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL    +              ++          +R        +  + + +   ++++  
Sbjct: 90  LLKLDAERARAAGVSLAEASPALIAGTLQLPGEIRFNEDRTAHVVPRVAGVAESVAANLG 149

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L     L            + E +  +  L L    ++++  L       ++  L+   
Sbjct: 150 QLVKKGQLLATLTSPAISEQRSELMAAQKRLALARTTYQREKQLWQEKISAEQDYLQAQQ 209

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L+E        Q+  A   +  +       +  + +P  G +V     +     Q S  
Sbjct: 210 ALREAEIASANAQQKLAAIGA-GSGTAGALNRFELRAPFDGVVVEKHL-AVGEAVQDSTA 267

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +  I    +  +   KV    +  V+ G  ATV    +          ++  +  +I Q+
Sbjct: 268 VFTIS-DLRSVWAEMKVAASDLPFVRVGEKATVHATAFESRAT----GVVAYVGALIGQE 322

Query: 378 DNNL 381
               
Sbjct: 323 TRTA 326


>gi|294674713|ref|YP_003575329.1| RND family efflux transporter MFP subunit [Prevotella ruminicola
           23]
 gi|294473954|gb|ADE83343.1| efflux transporter, RND family, MFP subunit [Prevotella ruminicola
           23]
          Length = 417

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 82/245 (33%), Gaps = 23/245 (9%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             +    S L    +S  K   ++  L   N +S  +LN  +  +  +   L   +    
Sbjct: 75  TQVSGIVSHLYVDYNSVVKKGQVIAELDRTNLIS--ELNTAKANLSSAQSSLNYQLSNY- 131

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                  ELY++  L  A+  +       Q +         +   +      TI SPI G
Sbjct: 132 ---NRYKELYNK-GLVSADEYESARLQYLQAKEQVNTSKESVQKAQTNLGYATITSPIDG 187

Query: 299 TIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            I+  +S         S     L  I        + A +    I  VK+G   +     +
Sbjct: 188 VILS-KSVEEGQTVAASFNTPELFVIAQDLTDMRVIADIDEADIGGVKEGQRVSFTVDAF 246

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            D +   F+  + ++    + + N +     YEV++        +N+++L+ G  A V  
Sbjct: 247 PDDQ---FEGRVTQVRQQATTESNVVT----YEVVISAP-----NNDLKLKPGLTANVTI 294

Query: 416 TAKNT 420
                
Sbjct: 295 FTLEK 299



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 67/173 (38%), Gaps = 4/173 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I+ S++++G I    +V  + +  SGI+    V+  S + +G  +   +       ++
Sbjct: 53  TNIQTSITATGTIEPVTSV-TVGTQVSGIVSHLYVDYNSVVKKGQVIAELDRTNLISELN 111

Query: 98  LKKVSIKNLRCHIDTEKS---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             K ++ + +  ++ + S       L NK  V    +ES   Q L    + +++   V  
Sbjct: 112 TAKANLSSAQSSLNYQLSNYNRYKELYNKGLVSADEYESARLQYLQAKEQVNTSKESVQK 171

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              +  Y ++   +  +             +S     L    +DLT M+ + +
Sbjct: 172 AQTNLGYATITSPIDGVILSKSVEEGQTVAASFNTPELFVIAQDLTDMRVIAD 224


>gi|229587707|ref|YP_002869826.1| putative ABC transporter lipoprotein [Pseudomonas fluorescens
           SBW25]
 gi|229359573|emb|CAY46415.1| putative ABC transport system, lipoprotein [Pseudomonas fluorescens
           SBW25]
          Length = 352

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 83/255 (32%), Gaps = 17/255 (6%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            + +  L+N ++ L    S   +    +     + A ++++LN+   +       ++ N 
Sbjct: 93  LVAQAQLKNATATLERQSSVIAQAQATVAADRAEVAFAEHELNRYNHLAGVGAGTVQ-NA 151

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEIS---RDLEQNQRTFADEMSKLTILEKTREQKT 291
            + K  +         A    A   K++       +  +       + L +         
Sbjct: 152 QQAKTRIDQATARLANATAVLAAERKQVEILTAQRDAAEGGLKRAQAALELASYQLSYTR 211

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I++P+ G +   ++     Y      ++ +VP  +   + A     Q+ H+  G    VR
Sbjct: 212 IVAPVDGMV-GERAVRVGAYVTPGSKILAVVPLEEAYVV-ANFQETQLSHMHAGQAVQVR 269

Query: 352 FPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNN----I 403
                    +     +E + P      +    +  T  + +V+ +I      + N     
Sbjct: 270 VDSLD---GELLNGHLESLAPATGVTFASVKPDNATGNFTKVVQRIPVKIVLEPNQALTE 326

Query: 404 ELRNGFPAEVLFTAK 418
            LR G   E     +
Sbjct: 327 RLRVGMSVEASVDTQ 341



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/241 (7%), Positives = 67/241 (27%), Gaps = 9/241 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK+  VE+  ++  G  L   +D +               +  +    + L+  ++  
Sbjct: 54  GFIKEVLVEDNQRVKAGQLLALIDDRDFRAAAQAADADTLVAQAQLKNATATLERQSSVI 113

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +    +   ++     ++            +   ++ +   TR+        +    
Sbjct: 114 AQAQATVAADRAEVA--FAEHELNRYNHLAGVGAGTVQNAQQAKTRIDQATARLANATAV 171

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  R  +          +   ++ A +  +L   +    +    +   + E+   +   
Sbjct: 172 LAAERKQVEILTAQRDAAEGGLKR-AQAALELASYQLSYTRIVAPVDGMVGERAVRVGAY 230

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE------QKTILSPIAG 298
                +           +  + ++ Q +       + +   + +          L+P  G
Sbjct: 231 VTPGSKILAVVPLEEAYVVANFQETQLSHMHAGQAVQVRVDSLDGELLNGHLESLAPATG 290

Query: 299 T 299
            
Sbjct: 291 V 291


>gi|254480667|ref|ZP_05093914.1| efflux transporter, RND family, MFP subunit, putative [marine gamma
           proteobacterium HTCC2148]
 gi|214039250|gb|EEB79910.1| efflux transporter, RND family, MFP subunit, putative [marine gamma
           proteobacterium HTCC2148]
          Length = 439

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 16/181 (8%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L +  E Y          L   + D  ++ +   + +S+L    + ++  T  +P AG 
Sbjct: 166 ELVNAQEEYLLVLNRNNERLLRAAEDRLESLQISTELVSELKTSRQVQQTITFYAPQAGV 225

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +          Y Q    LM I       ++ A+V  +Q   V  G    +       + 
Sbjct: 226 VDNLNIR-EGFYVQPGTTLMSIGALD-QVWVEAEVFERQAALVSIGMPVHMSL---EYLP 280

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +++   ++ I P + ++   L       V L+     F + +  L     A+V+F A +
Sbjct: 281 GREWHGEVDYIYPSLDEKTRTL------RVRLR-----FDNADGVLLPNMFAQVVFQADS 329

Query: 420 T 420
            
Sbjct: 330 K 330



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 47/125 (37%), Gaps = 3/125 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQVE-NGSQILQGTPLLTF-EDIE 91
           +++ P++  + + G +  +++ +    P   G I+K  V+ +G  + +G PL        
Sbjct: 108 AVMKPLQTRIRTVGYVQYDEDRLIHIHPRVEGWIEKLHVKASGDPVTRGQPLYELYSPEL 167

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                +   V  +N    +   +  L+ L    +++ +   SR+ Q         +    
Sbjct: 168 VNAQEEYLLVLNRNNERLLRAAEDRLESLQISTELVSELKTSRQVQQTITFYAPQAGVVD 227

Query: 152 VFNYG 156
             N  
Sbjct: 228 NLNIR 232


>gi|170745388|ref|YP_001766845.1| type I secretion adaptor protein [Methylobacterium radiotolerans
           JCM 2831]
 gi|170658989|gb|ACB28043.1| type I secretion adaptor protein (HlyD family) [Methylobacterium
           radiotolerans JCM 2831]
          Length = 439

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 51/361 (14%), Positives = 112/361 (31%), Gaps = 60/361 (16%)

Query: 15  ASLKRMTLLSIIGIIGL-ITWSILLPIEISVSSSGEILNEDNV-VEIKSPFSGIIKKFQV 72
           +    + L++ + + GL + W+I   + ++V+  G +L E    VE+ +P +G + +   
Sbjct: 52  SGAAAIVLVACLALAGLTLAWTIWGAVRVTVTGQGLLLREGGSFVEVHAPKAGWVDEI-A 110

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G ++  G  +      E    +   +  +  L                +  V  +A  
Sbjct: 111 AVGDRLSTGALIARLRAPEERGRVGDLQTRLDQLTAR------------RREIVARQADR 158

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +R E  L  L +     ++  N   +     L                LE +  L  A  
Sbjct: 159 TRAEIQLAELKRRGFAETQQLNAQRAQELEQL----------------LEAREGLRLAGN 202

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           S+  + L   + L                         RE     +  L  I+       
Sbjct: 203 STADRVLDARERLLA----------------------AREATVRARTELGSIDTTLLALR 240

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              A  L+ + R+    +         L++         + +   G +V  Q+ + +   
Sbjct: 241 TSQAQELEGLDREQHDLEGQLDQAKLALSLA------TDVGATEPGQVVMIQA-TRNALV 293

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              QPL+     +        + P+  + V+ G +  V   +            + ++ P
Sbjct: 294 SAGQPLITYETGADRLEALVYLPPEAGKQVRPGMSVRVSLANAKREEYGSLVGTVRQVSP 353

Query: 373 I 373
           +
Sbjct: 354 V 354


>gi|325133011|gb|EGC55686.1| fatty acid resistance protein A [Neisseria meningitidis M6190]
          Length = 406

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 125 NELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 184

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 185 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 227

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 228 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 285

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 286 MKIGQPAEL 294



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 76  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELIQAVRQNR 135

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 136 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 195

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 196 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRT 236


>gi|33595980|ref|NP_883623.1| HlyD family secretion protein [Bordetella parapertussis 12822]
 gi|33601364|ref|NP_888924.1| HlyD family secretion protein [Bordetella bronchiseptica RB50]
 gi|33572983|emb|CAE36620.1| putative HlyD-family secretion protein [Bordetella parapertussis]
 gi|33575800|emb|CAE32878.1| putative HlyD-family secretion protein [Bordetella bronchiseptica
           RB50]
          Length = 337

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 94/292 (32%), Gaps = 15/292 (5%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +  AF++ E      + +     +        +    L+ +  + R+    +  L  ++ 
Sbjct: 44  VALAFDNSERIADMQVEEGDRVRAGQVLARQETRTLQLEAERAQARASAQEQALLRLRNG 103

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                ++  +                   L    R      +  ++       +     +
Sbjct: 104 SRPQEIAQARARADAATADAALAQQDLQRLQGTARATDGRAVSRQDIDRAAARLRVARAQ 163

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +A       L     D+ +    +   +++L +L     Q  + +P    +V  +  
Sbjct: 164 AETQAKALQLALLGPRDEDIAEAAAQWQASLAELALLRHRLAQAELKAPTDA-VVRARLL 222

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
              + A   +P+  +   ++  ++RA ++   +  V+ G  A V   +     ++     
Sbjct: 223 EPGDMASPQRPVYTLA-LTEPKWVRAYLSEPDLGRVRPGMRARV---YTDSQPDRAIDGQ 278

Query: 367 IEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +  I  +      + Q   L+T   YE+ +++ D         LR G PA V
Sbjct: 279 VGYISSVAEFTPKTVQTETLRTSLVYEIRIRVDDP-----QDRLRLGMPATV 325



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/289 (10%), Positives = 74/289 (25%), Gaps = 14/289 (4%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I   QVE G ++  G  L   E        +  +         +   ++       +  
Sbjct: 53  RIADMQVEEGDRVRAGQVLARQETRTLQLEAERAQARASAQEQALLRLRNG--SRPQEIA 110

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                 ++                         +V R    +      +   + + + K+
Sbjct: 111 QARARADAATADAALAQQDLQRLQGTARATDGRAVSRQDIDRAAARLRVARAQAETQAKA 170

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             L ALL    +D+      ++ +  ++  L +      +        +  +      + 
Sbjct: 171 LQL-ALLGPRDEDIAEAAAQWQASL-AELALLRHRLAQAELKAPTDAVVRARLLEPGDMA 228

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                         K +   L +          +  +   ++  + I   + G I     
Sbjct: 229 SPQRPVYTLALTEPKWVRAYLSEPDLGRVRPGMRARVYTDSQPDRAIDGQV-GYISSVAE 287

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ-IQHVKKGYTATVRFP 353
           F+      Q++ L              ++        ++ G  ATVR  
Sbjct: 288 FTPKTV--QTETL------RTSLVYEIRIRVDDPQDRLRLGMPATVRLD 328


>gi|253989286|ref|YP_003040642.1| membrane fusion protein [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780736|emb|CAQ83898.1| membrane fusion protein [Photorhabdus asymbiotica]
          Length = 384

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 72/223 (32%), Gaps = 33/223 (14%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+  L +  R + K      + +   +   R +N     +          + + L + +
Sbjct: 104 ASRARLEKL-RAILKEEQYTYQLLVITEKRQRQLNLYSATSQQLLDEATFGVKKSLARIE 162

Query: 271 RTFADEMSK---LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP---------L 318
              AD       L   E +     I +PIAG +               Q          L
Sbjct: 163 SLKADIKQNEHILHSEEVSLSYTQIYAPIAGVVTAIY-------VDPGQTLNVNQQTPVL 215

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M+I    K   + AKV+   I  +  G  A+ +           +   ++KI      + 
Sbjct: 216 MQIA-DLKNMTVYAKVSEADINQIVTGQKASFKIYSANQHI---WHGNVKKIMY----KP 267

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           + +    YY V+  +T     ++N  L+    A+V      +T
Sbjct: 268 DLINNAVYYTVLFDVT-----NDNFLLKPNMSADVTIVTHEST 305



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 13/146 (8%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +V ++G I     V  + S  SG + K  VE G  +  G  + + +D      ++  +  
Sbjct: 50  TVDAAGIIQPTSQV-NVGSQISGQLIKLYVEVGDIVEAGKLVASIDDTFYRTKVEASRAR 108

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           ++ LR  +  E+     L           E R+ QL      Y +T  ++ +     V +
Sbjct: 109 LEKLRAILKEEQYTYQLLV--------ITEKRQRQL----NLYSATSQQLLDEATFGVKK 156

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLL 188
           SL    +    I  N   L ++   L
Sbjct: 157 SLARIESLKADIKQNEHILHSEEVSL 182


>gi|294141443|ref|YP_003557421.1| hypothetical protein SVI_2672 [Shewanella violacea DSS12]
 gi|293327912|dbj|BAJ02643.1| hypothetical protein [Shewanella violacea DSS12]
          Length = 354

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 101/307 (32%), Gaps = 26/307 (8%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L+    + +   +             + Y I  +     +       +  ++  + N+  
Sbjct: 56  LQALLLTGQISSVQSQSFMVPKAGDAWRYQIQWMLPEGAVAEPGQTVVIFDKSQIANQIE 115

Query: 187 LLRA-LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL--------RENIHEQ 237
            L A LL    ++ ++  +L      ++ D+  Q   + KS L+          ++  E 
Sbjct: 116 QLEASLLRVTAQEQSLGIDLTSSVLQAKFDVKMQGSELEKSRLDADVPADYISAKDYAEN 175

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +  L        +A       L   +    Q          +LT      EQ  + + I 
Sbjct: 176 QFNLMQAGSELSKAKQALKEVLDRQAASKAQLAIDRHRAQLELTQALHGLEQLELKAKIK 235

Query: 298 GTIVY------NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           G ++Y      N+ F+  +  Q  + +  + P      + A V    +  +  G   T+R
Sbjct: 236 GPVLYASDPWSNKKFAVGDTVQIGRQIATL-PAMGELEVVAWVNEVDVDKIAVGTQVTLR 294

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
                    K F   I+ I     +Q    Q+  +    ++++  A  D +I++  G   
Sbjct: 295 L---DSQSAKPFTGSIKGIGRQALKQPAWGQSNWF---KVEVSFEA--DEDIKIIPGM-- 344

Query: 412 EVLFTAK 418
            VL +  
Sbjct: 345 SVLVSTG 351


>gi|294625469|ref|ZP_06704099.1| membrane fusion protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600236|gb|EFF44343.1| membrane fusion protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 361

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 54/175 (30%), Gaps = 12/175 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             L  +          ++++       +    +L  E      +Y       + +     
Sbjct: 105 TRLASERAQAQAEIAAIQQSRAVASIDVARSRQLLAEGLAGRRDYEL-TQIKVAEADAKL 163

Query: 274 ADEMSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           A+  +KLT ++    +++   + +P  G +    + S S        L  I P      +
Sbjct: 164 AESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAV 223

Query: 331 RAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQ 377
              +  + +  ++ G            ++F  +  +    F   +  IDP  +  
Sbjct: 224 ELYIDGRDVPLIRPGRPVRLEFEGWPAIQFSGWPSVAHGMFDGRVRAIDPNAAPD 278



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 51/163 (31%), Gaps = 15/163 (9%)

Query: 42  ISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            + S  G+++     D    + +   G ++++ V +G  + +G P+    D++       
Sbjct: 48  QTASGKGQVVSLDPSDRQQPVTAFVPGRVERWYVHDGQHVAKGDPIARVGDLDP------ 101

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                 +L   + +E++                     +    L +  +         I 
Sbjct: 102 ------DLLTRLASERAQAQAEIAAIQQSRAVASIDVARSRQLLAEGLAGRRDYELTQIK 155

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                 K+  +R +   ++       + L+RA      + L  
Sbjct: 156 VAEADAKLAESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNA 198


>gi|254522478|ref|ZP_05134533.1| multidrug resistance efflux pump [Stenotrophomonas sp. SKA14]
 gi|219720069|gb|EED38594.1| multidrug resistance efflux pump [Stenotrophomonas sp. SKA14]
          Length = 386

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 97/324 (29%), Gaps = 29/324 (8%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R  I      ++    +  V +     + E LL    + ++         + S   +L  
Sbjct: 83  RGQITVMAPQVNGYVTEVLVKDFQHVKKGEPLLRIDDRIYAQRVAQAQATLDSARAALAN 142

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                              S  +A L   + +    + L  +  VS ND     R  +++
Sbjct: 143 SDQSQAQNRAQIASAHATLSAGQAELQRSRNEARRYEELAAQQLVSVND-----RDKFRT 197

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           +    +   +Q      I E   E  +      K +   +E  Q       ++L +    
Sbjct: 198 SQASAQASVQQAQAQIRIAE---ETLVSTQVARKSLEAQVESAQ-------AQLELARID 247

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                I +P  G I          Y      L+ +VP     ++ A     Q   +  G 
Sbjct: 248 LANTVIHAPRDGQISEASVR-VGQYVAAGSQLLFLVP--DTLWVVANYKEGQTWGMAVGQ 304

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAF 398
            AT     +     +  +  +++I P    +      +  +  + +V+    ++I     
Sbjct: 305 PATFSVDAF---HGQVLRGRVQEIAPATGSEFSVLRPDNASGNFTKVVQRLPVRIRIDGE 361

Query: 399 SDNNIELRNGFPAEVLFTAKNTTL 422
                +LR G    V    ++  +
Sbjct: 362 QKLAAQLRPGMSVIVRVDTRSKPM 385



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 14/193 (7%)

Query: 24  SIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +++GI  ++  W +  P   SV  +        +  +    +G + +  V++   + +G 
Sbjct: 54  ALLGIALILRAWHLW-PFTSSVMVTDNAYVRGQITVMAPQVNGYVTEVLVKDFQHVKKGE 112

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRC------------HIDTEKSALDFLNNKYDVLEKA 130
           PLL  +D      +   + ++ + R                   +       + ++    
Sbjct: 113 PLLRIDDRIYAQRVAQAQATLDSARAALANSDQSQAQNRAQIASAHATLSAGQAELQRSR 172

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            E+R  + L             F    +S   S++    ++R      +  +     L A
Sbjct: 173 NEARRYEELAAQQLVSVNDRDKFRTSQASAQASVQQAQAQIRIAEETLVSTQVARKSLEA 232

Query: 191 LLSSHQKDLTMMK 203
            + S Q  L + +
Sbjct: 233 QVESAQAQLELAR 245


>gi|48842912|emb|CAF31358.1| putative multidrug resistance efflux protein [Burkholderia cepacia]
          Length = 406

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 86/257 (33%), Gaps = 14/257 (5%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +++    L   + ++R +Y N   L N     RA L S +  L       + +   +
Sbjct: 143 QIALATAQADLAATVRKVRGLYSNERGLANSIDGARAELDSRRTALDK----AKADYSRR 198

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            DL +   I  +     R+ +   ++            + +       I      +    
Sbjct: 199 EDLGRSGAISREELAHARDTLTSAQSAYAAAQSALATLSEQHQTSKALIDDTAVASHPDV 258

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                +L        +  I++P+ G +   ++           PL+ +VP  +  ++ A 
Sbjct: 259 QAAAERLRAAYLAHARTDIVTPVTGYVAK-RTVQVGQRVSPGVPLLAVVPL-RELWVDAN 316

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----E 385
            T KQ++H++ G    +    Y D      + +++ +            N         +
Sbjct: 317 FTEKQLEHMRIGQPVELTADLYGDAVRYTGRVQSLGVGTGSAFSLLPAQNATGNWIKIVQ 376

Query: 386 YYEVILKITDLAFSDNN 402
              V +++T+ A  D +
Sbjct: 377 RLPVRIELTEPAQLDAH 393


>gi|153213504|ref|ZP_01948815.1| multidrug resistance efflux pump [Vibrio cholerae 1587]
 gi|254286573|ref|ZP_04961529.1| Multidrug resistance efflux pump [Vibrio cholerae AM-19226]
 gi|124115968|gb|EAY34788.1| multidrug resistance efflux pump [Vibrio cholerae 1587]
 gi|150423331|gb|EDN15276.1| Multidrug resistance efflux pump [Vibrio cholerae AM-19226]
          Length = 368

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 67/221 (30%), Gaps = 24/221 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + F   + +    L+      ++        +      R  +++ +K++   + L EK 
Sbjct: 90  PRPFELAVKAAKFDLQQAAQSYQADSAAISVAQANEVAARVKVTNAKKNVERNRVLAEKG 149

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +SQ         +     EL             + +   E      +            
Sbjct: 150 TISQ-------ATMDNILAELETAQAGLAQASSALEKAKQEFGPRGID------------ 190

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                  +++            +++P  G I      +  +YA   QPL+  + ++   +
Sbjct: 191 NPEIQSVLNRQEQALLNLNHTKLIAPADGVITNMNV-AVGDYAAAGQPLLTFI-NNNNLW 248

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           + A V    + H+K G    + F  Y     + F   I  I
Sbjct: 249 LTAMVRENSLAHLKSGDKVKIVFDAYP---GEVFTGQISSI 286



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/183 (9%), Positives = 50/183 (27%), Gaps = 4/183 (2%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           +  M            +  T      +  L  W   L  +     + +      ++ I  
Sbjct: 5   NTKMSAEKSDKKINQARSFTYYIFALVAAL--WLYTLWADRMTPMTDQARVNGQLIRISP 62

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             SG I +  + N S +  G  L+T +       +   K  ++        + +A+    
Sbjct: 63  EVSGPIAQVHITNNSSVKTGDELVTIDPRPFELAVKAAKFDLQQAAQSYQADSAAISVAQ 122

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                      + ++ +     +  +    +    + ++   L+     +          
Sbjct: 123 ANEVAARVKVTNAKKNV--ERNRVLAEKGTISQATMDNILAELETAQAGLAQASSALEKA 180

Query: 182 ENK 184
           + +
Sbjct: 181 KQE 183


>gi|73539944|ref|YP_294464.1| secretion protein HlyD [Ralstonia eutropha JMP134]
 gi|72117357|gb|AAZ59620.1| Secretion protein HlyD [Ralstonia eutropha JMP134]
          Length = 375

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 48/374 (12%), Positives = 105/374 (28%), Gaps = 82/374 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  I +  +G I +  V +   +  G  L+  +D              ++ R  + 
Sbjct: 65  VGGDVTVIGAKVAGYISEVAVTDNQPVHAGDVLVRIDD--------------RDYRAALA 110

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + A+       + L+     +E  +      +    +                     
Sbjct: 111 KAEGAVAAQQALLENLDATQRLQEAVIGQARAGFAGANADTVRAR--------------- 155

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                                    +D     +L EK+AVS            K+  + +
Sbjct: 156 -------------------------QDQARYASLVEKSAVSIQ-------SSQKADADYK 183

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +     +     +     +  +        I     Q +   A  +++  I +       
Sbjct: 184 QAAANSEKAQASLLAAQRQLEV--------IGTQKLQAKAALAQAVAERDIAKLNLSYTE 235

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P+ GT+  N+      YA     L+ IVP S   ++ A     Q+ H+++G   T+ 
Sbjct: 236 LRAPVDGTV-GNRRARVGAYAGSGSQLLSIVPASG-LWVDANFKEGQLAHMREGMPVTI- 292

Query: 352 FPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNI 403
                 +  + F   +  + P          ++      T+    V ++I          
Sbjct: 293 --EADVLPGRVFHGRVGSLAPATGAQFSVLPAENATGNFTKIVQRVPVRIQLDEKDATLG 350

Query: 404 ELRNGFPAEVLFTA 417
            LR G         
Sbjct: 351 TLRPGLSVIAQVDT 364


>gi|54298924|ref|YP_125293.1| hypothetical protein lpp2991 [Legionella pneumophila str. Paris]
 gi|53752709|emb|CAH14144.1| hypothetical protein lpp2991 [Legionella pneumophila str. Paris]
          Length = 381

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 77/239 (32%), Gaps = 31/239 (12%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +   S  +      + L+    +S+N+   ++  +  + + L +   +   ML  +++  
Sbjct: 107 KDSYSIAKAKFVGTEELWNAGLISKNNYLSEKSGLDTARVTLMQATRKLSEMLEKMDDKN 166

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY------ 302
            +     +                 AD      IL        + +P  G ++Y      
Sbjct: 167 TQNISNLS----------------LADFDKVRKILTSNHNLIHLKAPSDGIMLYPPKSGE 210

Query: 303 --NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
             N   +  +  +  Q +  I    K   +   V    I  ++ G  AT+    +   + 
Sbjct: 211 DKNNRVTVGSTIKSGQVIALIG-DLKGISVEIDVPEIDIDKIRPGMQATISGVAFGRHQ- 268

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              K  +  ++   S  + +      +  ++++  L     +  ++ G  A +    ++
Sbjct: 269 --LKGKLVAVNAQAS--NTSTGGLPSFTAVVEVNSLTPEQQSW-IKVGMSASIELNVES 322


>gi|240014928|ref|ZP_04721841.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           DGI18]
 gi|240121998|ref|ZP_04734960.1| efflux pump protein, fatty acid resistance [Neisseria gonorrhoeae
           PID24-1]
          Length = 384

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 103 NELVQAVRQNRRQNAATSQAGAQVALHRADLARAQDDLRRRSALAESGAVSAEELAHART 162

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 163 AVSQAQAAVKAALAEESSARAALGGDVSLRE-----------------QPEVQTAIGRLK 205

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                  +  + +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 206 DAWLNLRRTQVRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 263

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 264 MKIGQPAEL 272



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 60/186 (32%), Gaps = 11/186 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 54  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 113

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS---VYRS 163
           R +  T ++      ++ D+     + R    L   G   +         +S      ++
Sbjct: 114 RQNAATSQAGAQVALHRADLARAQDDLRRRSALAESGAVSAEELAHARTAVSQAQAAVKA 173

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQE 220
              + +  R+     + L  +  +  A+       L + +          V++  +   +
Sbjct: 174 ALAEESSARAALGGDVSLREQPEVQTAIGRLKDAWLNLRRTQVRAPADGQVAKRSVQVGQ 233

Query: 221 RIVYKS 226
           ++   +
Sbjct: 234 QVAAGA 239


>gi|254787515|ref|YP_003074944.1| macrolide-specific efflux protein MacA [Teredinibacter turnerae
           T7901]
 gi|237684183|gb|ACR11447.1| macrolide-specific efflux protein MacA [Teredinibacter turnerae
           T7901]
          Length = 437

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 74/214 (34%), Gaps = 19/214 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELR---ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            S+  L  QE ++      L     N+  QKNML        E +    N L      + 
Sbjct: 113 ASRASLQAQEALLSGRKAALELAEANVKRQKNMLVDRATSQQEVDTAI-NALMNAQSSMA 171

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHS 325
           Q Q   A   + L   E       I++P+AGT+V             +Q  PL+  +   
Sbjct: 172 QLQAQIAQSRAGLASDEAELGYSKIVAPMAGTVVSINV-KEGQTLNAAQSAPLVMTIADL 230

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               +   V+   +  +K G    V F    +   +++   + +I P     +N      
Sbjct: 231 TNMTVETDVSEADVGKLKPGMA--VYFTTLGNG-HRRWYGKLRQILPTPEVTNN------ 281

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              V+L        + +  L +G  A+V F   +
Sbjct: 282 ---VVLYTALFDVENKDGTLLSGMTAQVFFVTSS 312


>gi|229087122|ref|ZP_04219272.1| multidrug resistance protein A [Bacillus cereus Rock3-44]
 gi|228696190|gb|EEL49025.1| multidrug resistance protein A [Bacillus cereus Rock3-44]
          Length = 225

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 56/181 (30%), Gaps = 11/181 (6%)

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I+          A  L E + ++ +N        S     +   +   +  P + T+V
Sbjct: 49  AKIDGKVIPIASPVAGKLTEWNAEIGKNYNENDKLGSVSAPGQNGEQTMDVTIPQSATVV 108

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
            + + + + +     P+          ++ A +    I  VKKG    V    Y +    
Sbjct: 109 QSNA-TKNAFVGAGSPIAYAY-DMSDLWVTANIEETDIDDVKKGQEVDVYVDAYPNTT-- 164

Query: 362 KFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLF 415
                +E++    +       ++  T  Y +V   +      D   ++ +  G    V  
Sbjct: 165 -LTGKVEQVGLTTANTFSMLPSSNATANYTKVTQVVPVKVSLDHSKSVNIVPGMNVTVRI 223

Query: 416 T 416
            
Sbjct: 224 H 224


>gi|146343871|ref|YP_001208919.1| HlyD family secretion protein [Bradyrhizobium sp. ORS278]
 gi|146196677|emb|CAL80704.1| putative HlyD-family secretion protein [Bradyrhizobium sp. ORS278]
          Length = 334

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/298 (9%), Positives = 93/298 (31%), Gaps = 39/298 (13%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +   +  R  +L   +G    +   V       + +SL     +               +
Sbjct: 59  IATKYAGRVAELSADIGDLVESGQIVARMDSKELQQSLAKAQAQAEQAQHVVDQARASLA 118

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L+   +  ++++   ++L +    ++   +Q+++ +  +   L  +             
Sbjct: 119 QLQTQKTLAEQEMERTRSLLQNGWTTKETADQRQQALDAAIAGLAGSQAR---------- 168

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                              + + +R        + +        ++++P AG I Y +  
Sbjct: 169 -------------------ISEAERALEAVRHDVALYTVQIADNSLIAPKAGRIQY-RLA 208

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +          +  ++  +   Y+   +  +++  +K G  A +    YAD       A 
Sbjct: 209 NVGEVLGAGGKVFTML-DTGYVYMDVFLPTEEVGKIKIGSDARILLDAYADH---PIPAK 264

Query: 367 IEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  +         + +  + + +  + V +++     + +   +R+G P        +
Sbjct: 265 VSFVASQAQFTPKTVETRSERDKLMFRVRVRVDPARLAAHADAVRSGLPGVAYVRWGS 322



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 47/149 (31%), Gaps = 2/149 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +   + G  +  G  +   +  E    +   +   +  +  +D  +++L  L  + 
Sbjct: 65  GRVAELSADIGDLVESGQIVARMDSKELQQSLAKAQAQAEQAQHVVDQARASLAQLQTQK 124

Query: 125 DVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            + E+  E     L +     +      +  +  I+ +  S        R++   R D+ 
Sbjct: 125 TLAEQEMERTRSLLQNGWTTKETADQRQQALDAAIAGLAGSQARISEAERALEAVRHDVA 184

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             +  +        K   +   L     V
Sbjct: 185 LYTVQIADNSLIAPKAGRIQYRLANVGEV 213


>gi|116252618|ref|YP_768456.1| transmembrane efflux pump [Rhizobium leguminosarum bv. viciae 3841]
 gi|115257266|emb|CAK08361.1| putative transmembrane efflux pump [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 368

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 39/330 (11%), Positives = 87/330 (26%), Gaps = 41/330 (12%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            S   ++ +I      +     +  V + +    ++ L     + +          ++SV
Sbjct: 47  TSQAQVQAYIVGIAPEVTGRVVEVGVTDNSRVEADQLLFRIDPERYELAVSEAEASLASV 106

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            +S+      + +     +  +     LR   +   +       L ++   S+   +   
Sbjct: 107 GQSMGASTAAVDAAQAKLVTAQVDRDNLREQAARAAE-------LEKRGVYSKARADSTR 159

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
               +S   +     E       +    ++                          ++ L
Sbjct: 160 SAFGQSEAAVIGAEAELAKAKEQLGPSGNDN-------------------PQLRAALAAL 200

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                   + T+ +P AG +   Q  +        Q  M  +      +I A      ++
Sbjct: 201 EKARLDLVRTTVQAPSAGVVTNLQL-TIGKVVSAGQSAMTFI-DVGTIWITAAFKENSLE 258

Query: 341 HVKKGYTATVRFPHYADIREK------KFKAIIEKID-----PIISQQDNNLQTQEYYEV 389
            V  G  A V F                F       D     P I      +Q  + + V
Sbjct: 259 KVAVGNRAEVLFDALPGRLFPAQVESVGFGVSQGSTDPNTGLPTIRSDSGWVQEPQRFPV 318

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            L I +       +    G  A V+    +
Sbjct: 319 RLIIEEAQRPKGGVRY--GSQATVVIYTGD 346



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 53/159 (33%), Gaps = 5/159 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
             S+ +   +  +V I    +G + +  V + S++     L   +       +   + S+
Sbjct: 44  TPSTSQAQVQAYIVGIAPEVTGRVVEVGVTDNSRVEADQLLFRIDPERYELAVSEAEASL 103

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL-----LDFLGKYHSTCSKVFNYGIS 158
            ++   +    +A+D    K    +   ++  EQ      L+  G Y    +        
Sbjct: 104 ASVGQSMGASTAAVDAAQAKLVTAQVDRDNLREQAARAAELEKRGVYSKARADSTRSAFG 163

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
               ++      +           N +  LRA L++ +K
Sbjct: 164 QSEAAVIGAEAELAKAKEQLGPSGNDNPQLRAALAALEK 202


>gi|78186383|ref|YP_374426.1| secretion protein HlyD [Chlorobium luteolum DSM 273]
 gi|78166285|gb|ABB23383.1| Secretion protein HlyD [Chlorobium luteolum DSM 273]
          Length = 323

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 64/191 (33%), Gaps = 24/191 (12%)

Query: 239 NMLRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTR------EQK 290
            +L  +    +E   E    ++  ++   L  ++R    + ++L    +           
Sbjct: 63  KILPSVAGRVEEVRAEEGAMVRKGQVLALLSSSERAALLDAARLQGSSEQSYWQSVYRPT 122

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            +L+PI G ++  +S         S  L  +   S    ++A V    I  VK G  A +
Sbjct: 123 AVLAPIDGQVI-VRSIEPGQTVTSSDSLFVL---SDRLIVKAYVDETDIGRVKVGQKALI 178

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
               Y +IR       +  I      Q+N      YY   + +      D     R+G  
Sbjct: 179 GLDAYPEIR---LNGRVSHIYYESHLQNN---VNIYY---VDVIPETVPD---VFRSGMS 226

Query: 411 AEVLFTAKNTT 421
           A +    +  T
Sbjct: 227 ANIDIIVREKT 237



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           VS++GE+    N ++I    +G +++ + E G+ + +G  L      E   L+D  ++ 
Sbjct: 50  VSTTGEVEP-RNRLKILPSVAGRVEEVRAEEGAMVRKGQVLALLSSSERAALLDAARLQ 107


>gi|87302111|ref|ZP_01084936.1| possible membrane fusion protein [Synechococcus sp. WH 5701]
 gi|87283036|gb|EAQ74992.1| possible membrane fusion protein [Synechococcus sp. WH 5701]
          Length = 379

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 82/214 (38%), Gaps = 22/214 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            DL+Q+E  +              ++      +L++E  +   + +   +R L   + + 
Sbjct: 110 GDLSQRELELGAQVRLAEAEESRARSDYERRKKLFEEGAISEDDIVSFRTRALT-ARASL 168

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--------IVPHS 325
                +       R++ TI +P  G I   +      +   +             +V  +
Sbjct: 169 DVARKRFNQRTVERDELTIRAPFDGVITQ-RFADPGAFVTPTTSASANAGASSSSVVELA 227

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           +   + AKV    I  +  G +A+VR   + D   K+F A + ++ P   + +N      
Sbjct: 228 QGMEVVAKVPENDIGRISIGQSASVRADAFPD---KRFAARVVQVAPRAVKNNNVTS--- 281

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +EV L ++D     NN+ LR G  A++ F   +
Sbjct: 282 -FEVKLALSD----PNNL-LRIGMTADIDFQTGS 309



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 53/134 (39%), Gaps = 5/134 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   VS+SGE+      V +     G+++   V+ G ++ +G P+   +    +  +  +
Sbjct: 61  LPGVVSASGELEA-GRSVNVSPKRGGVLESLFVDEGDRVSKGQPIAQMD----SGDLSQR 115

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++ +       + E+S       +   L +     E+ ++ F  +  +  + +       
Sbjct: 116 ELELGAQVRLAEAEESRARSDYERRKKLFEEGAISEDDIVSFRTRALTARASLDVARKRF 175

Query: 160 VYRSLKMKLTRMRS 173
             R+++     +R+
Sbjct: 176 NQRTVERDELTIRA 189


>gi|153830688|ref|ZP_01983355.1| multidrug resistance efflux pump [Vibrio cholerae 623-39]
 gi|297578914|ref|ZP_06940842.1| multidrug resistance efflux pump [Vibrio cholerae RC385]
 gi|148873839|gb|EDL71974.1| multidrug resistance efflux pump [Vibrio cholerae 623-39]
 gi|297536508|gb|EFH75341.1| multidrug resistance efflux pump [Vibrio cholerae RC385]
          Length = 368

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 67/221 (30%), Gaps = 24/221 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + F   + +    L+      ++        +      R  +++ +K++   + L EK 
Sbjct: 90  PRPFELAVKAAKFDLQQAAQSYQADSAAISVAQANEVAARVKVTNAKKNVERNRVLAEKG 149

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +SQ         +     EL             + +   E      +            
Sbjct: 150 TISQ-------ATMDNILAELETAQAGLAQASSALEKAKQEFGPRGID------------ 190

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                  +++            +++P  G I      +  +YA   QPL+  + ++   +
Sbjct: 191 NPEIQSVLNRQEQALLNLNHTKLIAPADGVITNMNV-AVGDYAAAGQPLLTFI-NNNNLW 248

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           + A V    + H+K G    + F  Y     + F   I  I
Sbjct: 249 LTAMVRENSLAHLKSGDKVKIVFDAYP---GEVFTGQISSI 286



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/183 (9%), Positives = 54/183 (29%), Gaps = 3/183 (1%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           ++      K +   +  R     I  ++  + W   L  +     + +      ++ I  
Sbjct: 4   NNTKTSAEKSDKKINQARSFTYYIFALVAAL-WLYTLWADRMTPMTDQARVNGQLIRISP 62

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             SG I +  + N S +  G  L+T +       +   K  ++        + +A+    
Sbjct: 63  EVSGPIAQVHITNNSSVKTGDELVTIDPRPFELAVKAAKFDLQQAAQSYQADSAAISVAQ 122

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                      + ++ +     +  +    +    + ++   L+     +          
Sbjct: 123 ANEVAARVKVTNAKKNV--ERNRVLAEKGTISQATMDNILAELETAQAGLAQASSALEKA 180

Query: 182 ENK 184
           + +
Sbjct: 181 KQE 183


>gi|254669953|emb|CBA04582.1| putative multidrug resistance protein [Neisseria meningitidis
           alpha153]
          Length = 390

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 109 NELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 168

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 169 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 211

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 212 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 269

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 270 MKIGQPAEL 278



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 60  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELIQAVRQNR 119

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 120 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 179

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 180 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRT 220


>gi|313887860|ref|ZP_07821540.1| efflux transporter, RND family, MFP subunit [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312846203|gb|EFR33584.1| efflux transporter, RND family, MFP subunit [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 706

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 102/290 (35%), Gaps = 38/290 (13%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  SVS  G+++   N VE+ S  +  + +  V+ G ++ +G  +   +       +  +
Sbjct: 62  LTNSVSEKGKVVPS-NSVEVFSEKALPVTEINVKVGDKVKKGDIIAKLDSSSIEQQLRSR 120

Query: 100 KVS----IKNLRCHIDTEKSAL-DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--KV 152
           K       KNL   I   K  L + L+ +      A  + E  L   + +Y +       
Sbjct: 121 KAQKAATDKNLSAQISAAKKRLSEALSGQKSGKSPALVAAETSLTQAMDQYLAAEKSYND 180

Query: 153 FNYGISSVYRS-LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF----E 207
           F   I   Y   L  +     S+       + +   L   L+ ++  ++  K+L      
Sbjct: 181 FKRSIDERYNQGLVAEKGSRESLAYQEEATDLRYKQLVDDLNKNRDKISENKSLASGASR 240

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH------------------------ 243
                Q DL+  +R + +  +E+ E   E                               
Sbjct: 241 SKDYLQADLDNAKRRLTEIGIEISEKQAEMTEKQGQLVGGEKQNVQSLPKNNNSNSEKKS 300

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           IN    E+ +  +  + E + D ++ QR   D  +K+  L + + +  IL
Sbjct: 301 INAGTLESKIVESTTVGE-NPDTKKIQREIDDLKNKIKSLTREQAETEIL 349



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 96/294 (32%), Gaps = 20/294 (6%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           + ++ D   K  S   +     I    +   L       +        LE +       +
Sbjct: 326 QREIDDLKNKIKSLTREQAETEILIGKISEDLATAKADEQKYQAEAEALEKEVEGQAKQV 385

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S   ++   K   E  +   +   +  +        L +N+   KN      +  +   
Sbjct: 386 ESTSLEVKKAK---EDLSADADKALKARKSRDDELKTLAQNLETAKNNYESAKKNLESTK 442

Query: 253 LEFANYLKEISRDLEQNQRTFADEMS-KLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           ++ AN +  +  +L+ +Q    +  + ++  L +  E+  I SP  GT+    +      
Sbjct: 443 IQVANEISGLRDNLKTSQAGANNLDNVEIENLSEELEKVMIKSPADGTVTEVPA-KEGQV 501

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              +  L KI        I +++       +  G    +       I  + +K  +  ID
Sbjct: 502 --PTGYLAKI-ETIDKLRIESQIKEYDKNSIGVGTEVEI---TSDSIMGEVYKGKVISID 555

Query: 372 PI-ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV--LFTAKNTTL 422
           P  +   ++N   +  Y+ +++I +        +   G    V  + + +  T 
Sbjct: 556 PAPMPVSEDNKSGEVLYKTVIEIDE----GQEEKFAPGMTLRVKYIISQEENTF 605


>gi|309378673|emb|CBX22744.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 390

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 109 NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 168

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 169 AVSQAQAAVKAALAEESSARAALGGQVALRE-----------------QPEVQTAIGRLK 211

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 212 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 269

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 270 MKIGQPAEL 278



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 53/161 (32%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 60  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 119

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 120 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 179

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  +  +  A+       L + + 
Sbjct: 180 ALAEESSARAALGGQVALREQPEVQTAIGRLKDAWLNLQRT 220


>gi|229062252|ref|ZP_04199574.1| multidrug resistance protein A [Bacillus cereus AH603]
 gi|228717080|gb|EEL68759.1| multidrug resistance protein A [Bacillus cereus AH603]
          Length = 225

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 61/173 (35%), Gaps = 17/173 (9%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSS 309
           A  +   +  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++
Sbjct: 62  AAGKLTEWKAEVGKNYNEN-----DKLGAVTVAGANGEQTVDVTIPQNATVVQSNA-TTN 115

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            +     P+          ++ A +    I  V+KG T  V    Y D         +E+
Sbjct: 116 AFVGAGSPIAYAF-DMNNLWVTANIEETNIDDVQKGQTVDVYVDAYPDTT---LTGKVEQ 171

Query: 370 IDPIISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
           +    +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 172 VGLTTANTFSMLPSSNSTANYTKVKQVVPVKISLDHSKSVNIVPGMNVSVRIH 224


>gi|156932837|ref|YP_001436753.1| hypothetical protein ESA_00634 [Cronobacter sakazakii ATCC BAA-894]
 gi|156531091|gb|ABU75917.1| hypothetical protein ESA_00634 [Cronobacter sakazakii ATCC BAA-894]
          Length = 74

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 4/64 (6%)

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEI 426
           + P     +   + Q YY V ++       + N     +  G  A V       T+   +
Sbjct: 2   VSPDTLLDEV-KRDQFYYRVYVRTKSAELKNRNGKRFPILPGMVANVEIKTGQKTVLDYL 60

Query: 427 IHPI 430
           I P+
Sbjct: 61  IKPL 64


>gi|78047126|ref|YP_363301.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78035556|emb|CAJ23203.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 361

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 54/175 (30%), Gaps = 12/175 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             L  +          ++++       +    +L  E      +Y       + +     
Sbjct: 105 TRLASERAQAQAEIAAIQQSRAVASIDVARSRQLLAEGLAGRRDYEL-TQIKVAEADAKL 163

Query: 274 ADEMSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           A+  +KLT ++    +++   + +P  G +    + S S        L  I P      +
Sbjct: 164 AESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAV 223

Query: 331 RAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQ 377
              +  + +  ++ G            ++F  +  +    F   +  IDP  +  
Sbjct: 224 ELYIDGRDVPLIRPGRPVRLEFEGWPAIQFSGWPSVAHGMFDGRVRAIDPNAAPD 278



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 51/163 (31%), Gaps = 15/163 (9%)

Query: 42  ISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            + S  G+++     D    + +   G ++++ V +G  + +G P+    D++       
Sbjct: 48  QTASGKGQVVSLDPSDRQQPVTAFVPGRVERWYVHDGQHVSKGDPIARVGDLDP------ 101

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                 +L   + +E++                     +    L +  +         I 
Sbjct: 102 ------DLLTRLASERAQAQAEIAAIQQSRAVASIDVARSRQLLAEGLAGRRDYELTQIK 155

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                 K+  +R +   ++       + L+RA      + L  
Sbjct: 156 VAEADAKLAESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNA 198


>gi|325926735|ref|ZP_08188044.1| multidrug resistance efflux pump [Xanthomonas perforans 91-118]
 gi|325542871|gb|EGD14325.1| multidrug resistance efflux pump [Xanthomonas perforans 91-118]
          Length = 372

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 83/268 (30%), Gaps = 28/268 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y      + + S     L S + D    K+L    A+S 
Sbjct: 72  EVALQQAEANLAKTVRQVRGLYRTVEGAQAELSAREVTLRSARSDFARRKDLAATGAISN 131

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      +  +   +  +    +     +++                      NQ   
Sbjct: 132 EELAHARDELAAAEAAVSGSRESLERNRALVDDSA------------------VANQPDV 173

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L        +  +++P++G +   +S       Q    LM +VP  +  ++ A 
Sbjct: 174 QTAAAQLRQAYLNHARTGVVAPVSGYVAR-RSAQVGQRVQPGSVLMAVVPL-EQVWVEAN 231

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----E 385
               Q++H++ G    +    Y        + +++ +            N         +
Sbjct: 232 FKETQLKHMRLGQEVELHSDLYGGGVSYTGRIQSLGLGTGSAFSLLPAQNASGNWIKIVQ 291

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
              V + +     + N + +      +V
Sbjct: 292 RVPVRIAVDSKQLASNPLRIGLSMKVDV 319



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 71/203 (34%), Gaps = 21/203 (10%)

Query: 20  MTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           M ++ I+ IIGL+ W  L+       + +         + N V+I     G +     E+
Sbjct: 1   MAIVVILAIIGLVVWYFLVGRWHEDTDDA-------YVQGNQVQITPMVGGTVVSIGAED 53

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++ +G  L+  +  +T       +V+++    ++      +  L    +  +    +R
Sbjct: 54  GMRVERGQLLVQLDPADT-------EVALQQAEANLAKTVRQVRGLYRTVEGAQAELSAR 106

Query: 135 EEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           E  L      +           IS   +  +         ++  +R  LE   +L+    
Sbjct: 107 EVTLRSARSDFARRKDLAATGAISNEELAHARDELAAAEAAVSGSRESLERNRALVDDSA 166

Query: 193 SSHQKDLTMMKNLFEKNAVSQND 215
            ++Q D+        +  ++   
Sbjct: 167 VANQPDVQTAAAQLRQAYLNHAR 189


>gi|198277612|ref|ZP_03210143.1| hypothetical protein BACPLE_03834 [Bacteroides plebeius DSM 17135]
 gi|198270110|gb|EDY94380.1| hypothetical protein BACPLE_03834 [Bacteroides plebeius DSM 17135]
          Length = 345

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 59/422 (13%), Positives = 114/422 (27%), Gaps = 99/422 (23%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS-- 64
            N+KRN   S   +T++ + GI     W     +       G +   DN    +      
Sbjct: 2   ANIKRNRQISNIILTVIILAGIC----W-----VSSHFIHLGNVEYTDNAQIKQHITPIN 52

Query: 65  ----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
               G IKK   E   ++ +G  LL  ED E                  +   ++     
Sbjct: 53  TRVPGFIKKIYFEEYQKVHKGDTLLVIEDSE--------------YLLRLAQAEANYKNA 98

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               D +     + E  +L           +                             
Sbjct: 99  LVGKDAMHTTISTTESNILVTDAGVREASVR----------------------------- 129

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                      L + + D      + +KNAV+    ++ +     +              
Sbjct: 130 -----------LKNAEADYKRYSEMIKKNAVTAQQFDRVKTEYEAAKARY---------- 168

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                E         +    E ++ LEQN        ++  +         IL+   G  
Sbjct: 169 -----EQMTRQKQSTSLVKHEQTQRLEQNDAAIKVAEAEFNLARLNLSYTVILATADGMT 223

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                       Q  Q ++ ++ +S+   I A     Q   ++ G    +       +  
Sbjct: 224 GRKNIH-EGQLVQPGQTMVTLIDNSEKWVI-ANYKETQTSVMQNGQKVDIEVDA---VPG 278

Query: 361 KKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
            KF  ++  I           P  +   N ++ ++   V ++ T     ++   LR G  
Sbjct: 279 VKFTGVVSSISDATGSSLSLMPQDNSAGNFVKVEQRIPVRIEFTSDNKKEDLARLRAGMN 338

Query: 411 AE 412
            E
Sbjct: 339 VE 340


>gi|187928250|ref|YP_001898737.1| methyltransferase FkbM family protein [Ralstonia pickettii 12J]
 gi|187725140|gb|ACD26305.1| methyltransferase FkbM family [Ralstonia pickettii 12J]
          Length = 879

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 84/238 (35%), Gaps = 18/238 (7%)

Query: 71  QVENG-SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            V+ G + + +   L+         L+   + S   LR  +    +    L  +   + +
Sbjct: 302 LVDQGRANVEKEQSLMRDHANRVESLLQQLQASETELRQLMQEGAARERELTRQAAQIRE 361

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             +     L+    ++     +   +G  ++          +R +   +  +E +  L +
Sbjct: 362 EVDELLRTLVQREKEFSQELMQTRQHGEQALADQFSASQAELRRLA--QEGIEREQVLTQ 419

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH------ 243
             L   Q+   +++++ ++ +    +L Q  R V + T E      E +  LRH      
Sbjct: 420 HNLQVRQQMEALLRSVAQRESDFARELLQTRREVEQITAEQARVHAELERTLRHEGAERE 479

Query: 244 --INELYDEANLE-------FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
             + E   +  LE        A    E SR+L+Q  R     + +   +   R+Q  +
Sbjct: 480 YALTEQIGQLRLEVKELLHSLAQRESEFSRELQQVHRDAQQAVGEQARVHAERDQALV 537



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 71/200 (35%), Gaps = 16/200 (8%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSAL-DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              +D  +  +   +     E + L D L  + ++  K  ++  EQL       H   S 
Sbjct: 242 QAQVDCAQAELAQAKHTAQQEITRLTDALATQQELHTKQEQALGEQLRAANDAVHQLEST 301

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           + + G ++V +   +              + + ++ + +LL   Q   T ++ L ++ A 
Sbjct: 302 LVDQGRANVEKEQSL--------------MRDHANRVESLLQQLQASETELRQLMQEGAA 347

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRH-INELYDEANLEFANYLKEISRDLEQNQ 270
            + +L +Q   + +   EL   + +++      + +         A+       +L +  
Sbjct: 348 RERELTRQAAQIREEVDELLRTLVQREKEFSQELMQTRQHGEQALADQFSASQAELRRLA 407

Query: 271 RTFADEMSKLTILEKTREQK 290
           +   +    LT       Q+
Sbjct: 408 QEGIEREQVLTQHNLQVRQQ 427



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 63/166 (37%), Gaps = 3/166 (1%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               ++++++ +  R H + E++       +   L +       ++ + L       S+ 
Sbjct: 448 QTRREVEQITAEQARVHAELERTLRHEGAEREYALTEQIGQLRLEVKELLHSLAQRESE- 506

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           F+  +  V+R  +  +     ++  R    ++   +    L S+  +     + L ++ +
Sbjct: 507 FSRELQQVHRDAQQAVGEQARVHAERDQALVQQLLTAYAELRSAEARGRDRERQLDQEIS 566

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +Q +L Q  +       +LRE +   ++    +    D  +  FA
Sbjct: 567 STQAELIQLTQAHATLEAQLREQMAAAQHTTLALKASLDAIHTSFA 612


>gi|325925489|ref|ZP_08186881.1| membrane fusion protein [Xanthomonas perforans 91-118]
 gi|325544102|gb|EGD15493.1| membrane fusion protein [Xanthomonas perforans 91-118]
          Length = 361

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 54/175 (30%), Gaps = 12/175 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             L  +          ++++       +    +L  E      +Y       + +     
Sbjct: 105 TRLASERAQAQAEIAAIQQSRAVASIDVARSRQLLAEGLAGRRDYEL-TQIKVAEADAKL 163

Query: 274 ADEMSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           A+  +KLT ++    +++   + +P  G +    + S S        L  I P      +
Sbjct: 164 AESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAV 223

Query: 331 RAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQ 377
              +  + +  ++ G            ++F  +  +    F   +  IDP  +  
Sbjct: 224 ELYIDGRDVPLIRPGRPVRLEFEGWPAIQFSGWPSVAHGMFDGRVRAIDPNAAPD 278



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 51/163 (31%), Gaps = 15/163 (9%)

Query: 42  ISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            + S  G+++     D    + +   G ++++ V +G  + +G P+    D++       
Sbjct: 48  QTASGKGQVVSLDPSDRQQPVTAFVPGRVERWYVHDGQHVSKGDPIARVGDLDP------ 101

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                 +L   + +E++                     +    L +  +         I 
Sbjct: 102 ------DLLTRLASERAQAQAEIAAIQQSRAVASIDVARSRQLLAEGLAGRRDYELTQIK 155

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                 K+  +R +   ++       + L+RA      + L  
Sbjct: 156 VAEADAKLAESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNA 198


>gi|332967783|gb|EGK06887.1| macrolide-specific efflux protein MacA [Kingella kingae ATCC 23330]
          Length = 411

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 75/181 (41%), Gaps = 26/181 (14%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLP---------------IEISVSSSGEILNEDNVVEIK 60
           +LK +  L++ G +    +    P               I  +VS++GEI +  ++V++ 
Sbjct: 25  ALKTVVALAVAGGLAWGGYQYFQPKNEVSYITEVVKRGTIAQTVSATGEI-SSSHLVDVG 83

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--- 117
           +  SG IK+  V+ G  + +G  +   +++  T+ +D  +  +   +  +++ + AL   
Sbjct: 84  AQVSGQIKRMHVKIGDVVKKGDLIAEIDNVSQTNELDRNRAQLVAYQAQLESAQIALRTA 143

Query: 118 -------DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                    L+    V ++ FE+ E+ L     +     + +    I+       +  TR
Sbjct: 144 QRKHSRYKTLSGADAVSKEEFEATEDALASARSRIKELQASIKQTQIAINTAETNLGYTR 203

Query: 171 M 171
           +
Sbjct: 204 I 204



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 66/212 (31%), Gaps = 21/212 (9%)

Query: 213 QNDLNQQERIVYKSTLELR--ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +  L   +  +  + + LR  +  H +   L   + +  E      + L      +++ Q
Sbjct: 123 RAQLVAYQAQLESAQIALRTAQRKHSRYKTLSGADAVSKEEFEATEDALASARSRIKELQ 182

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LT 328
            +       +   E       I +P  GT+V             SQ    +V  +   + 
Sbjct: 183 ASIKQTQIAINTAETNLGYTRITAPADGTVVAL-VVQEGQTINSSQTSPTVVQIADLTMM 241

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNN 380
             + ++       V+ G    V F   ++         ++ IDP +        S+  + 
Sbjct: 242 LNKMQIAEGDATKVRAGQK--VNFTILSEPDAP-ISTTLDSIDPGLTTMSQGSYSRTTDT 298

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             +  YY     + +    D  + +  G   +
Sbjct: 299 TTSAIYYYARATVPNP---DGKLAI--GMTTQ 325


>gi|288927121|ref|ZP_06421007.1| efflux transporter, MFP component, RND family [Prevotella buccae
           D17]
 gi|288336107|gb|EFC74502.1| efflux transporter, MFP component, RND family [Prevotella buccae
           D17]
          Length = 417

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 98/311 (31%), Gaps = 78/311 (25%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
              +  V+  G ++    VV+I     G++ +  V+ G+ + +G  ++   +        
Sbjct: 57  AKFDDYVNVDGRVVPI-QVVQISPEEGGVVLEKVVDEGAHVHKGDIIVKLSNSN------ 109

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                                        L+    + E +L +      +T   +    +
Sbjct: 110 -----------------------------LDLEILNAESELAEKQNMLRNTQISMEQDRL 140

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           ++   +L+++           +D+E K    R   +  ++ L            S+ +  
Sbjct: 141 NNRNEALQLE-----------MDVETKLRAYRHQGALQKEQLN-----------SREEYL 178

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + +   Y+  ++    I ++      +     E          ++S +LE  QR  +   
Sbjct: 179 KAK-EAYELAVKKNGLIQQRLKKDGQLRRSQME----------QMSDNLESMQRNVSLVR 227

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++   L+       + S I G +               Q +  I   S    + A+V   
Sbjct: 228 ARKAKLD-------VRSSIDGEV-GLLDVELGQSISPGQKIGVINDLSD-YKVEAQVDEH 278

Query: 338 QIQHVKKGYTA 348
            I  V+ G TA
Sbjct: 279 YIDRVRAGLTA 289


>gi|260461467|ref|ZP_05809714.1| efflux transporter, RND family, MFP subunit [Mesorhizobium
           opportunistum WSM2075]
 gi|259032537|gb|EEW33801.1| efflux transporter, RND family, MFP subunit [Mesorhizobium
           opportunistum WSM2075]
          Length = 399

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 65/205 (31%), Gaps = 18/205 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V Q D  +   +V     E + ++ +    L    +   +A+L            L+  +
Sbjct: 117 VKQGDHVKTGDLVLMLAAEEKISMRDNAKQLVAQRQAELDASLRLMKTGNLPKLQLDTAR 176

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  S+L   +   ++  + +P  G I         +   Q   +  I+        
Sbjct: 177 SNLTLAQSQLDTAQAELDRNEVKAPFDGVIDRVPV-ELGSSVMQGGEVATILKLD-PVIA 234

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           R +++ + + ++K G  A VR         +  +  +  I    S      +        
Sbjct: 235 RGEISERDLGYLKLGDKANVRLVS-----GQTVEGTVRYISRDASSATRTFRV------- 282

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF 415
               ++A  + +  +  G  AE+  
Sbjct: 283 ----EVAIPNGDGSVPAGMTAEIQL 303



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 4/104 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I+K  V+ G  +  G  +L     E   + D  K  +   +  +D     +   N   
Sbjct: 110 GVIEKLPVKQGDHVKTGDLVLMLAAEEKISMRDNAKQLVAQRQAELDASLRLMKTGNLPK 169

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             L+ A       L     +  +  +++    + + +  +  ++
Sbjct: 170 LQLDTA----RSNLTLAQSQLDTAQAELDRNEVKAPFDGVIDRV 209


>gi|291614966|ref|YP_003525123.1| efflux transporter, RND family, MFP subunit [Sideroxydans
           lithotrophicus ES-1]
 gi|291585078|gb|ADE12736.1| efflux transporter, RND family, MFP subunit [Sideroxydans
           lithotrophicus ES-1]
          Length = 291

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 86/249 (34%), Gaps = 30/249 (12%)

Query: 188 LRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           +R +  +      + K L ++   V++  L      +  +TL+ +    E  +    +  
Sbjct: 44  IRQVQLAFNGSERIAKMLVKEGDRVNKGQLLAM---LDTATLQQKVRKAEADSEAARLAA 100

Query: 247 LYDEANLEFANYLKE---ISRDLEQNQRTFADEMSK--------LTILEKTREQKTILSP 295
           +   +       L +   +++    + RT +D            L +  +     ++ +P
Sbjct: 101 VNAASTYRRTRMLVDQHFVAQQQADDARTASDAAHAGAHAAQAGLELARRALADASLYAP 160

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G I   +     + A   +P+  +   +   ++RA V    +  ++ G  A V    Y
Sbjct: 161 DNGIIQE-RILEPGDMASPQRPVYTLA-MTDPLWVRAYVKESDLGRIRPGMHAAVATDSY 218

Query: 356 ADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
            + R       +  I P       S +   +++   Y+V + +      +   ELR G P
Sbjct: 219 PNKRY---NGWLGYISPTAEFTPKSVETTEVRSSLVYQVRIFVC-----NPQGELRLGMP 270

Query: 411 AEVLFTAKN 419
           A V      
Sbjct: 271 ATVTIALGQ 279



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/176 (11%), Positives = 52/176 (29%), Gaps = 6/176 (3%)

Query: 55  NVVEIKSPFSG--IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           ++ +++  F+G   I K  V+ G ++ +G  L   +       +   +   +  R     
Sbjct: 43  DIRQVQLAFNGSERIAKMLVKEGDRVNKGQLLAMLDTATLQQKVRKAEADSEAARLAAVN 102

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             S       +  +L       ++Q  D      +  +               +    + 
Sbjct: 103 AASTY----RRTRMLVDQHFVAQQQADDARTASDAAHAGAHAAQAGLELARRALADASLY 158

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           +     +          A        L M   L+ +  V ++DL +    ++ +  
Sbjct: 159 APDNGIIQERILEPGDMASPQRPVYTLAMTDPLWVRAYVKESDLGRIRPGMHAAVA 214


>gi|188586552|ref|YP_001918097.1| efflux transporter, RND family, MFP subunit [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179351239|gb|ACB85509.1| efflux transporter, RND family, MFP subunit [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 462

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/380 (11%), Positives = 116/380 (30%), Gaps = 88/380 (23%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE   +  G +   +  + +    +G +K   VE G  +  G  L+              
Sbjct: 88  IEKKATVIGSVDPTERRIIV-PEVAGEVKSLYVEEGDYVSHGDLLM-------------- 132

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++   + +  ++  ++ LD    + +  +K   + E                        
Sbjct: 133 ELDDGDYQLQLEEAQANLDGAKAQLENAKKGARTGE------------------------ 168

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                             R + E      R      +++L  ++ L +    S  +L Q 
Sbjct: 169 ------------------RKEAETSVERAREAKEQMERELERVETLHQDGYASDQELEQM 210

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                 +  +LR     ++++     +                  +L+  +       + 
Sbjct: 211 TLQYKNAKEQLRAAEGYKQSVEEGARD-----------------EELDALRSQIKRAETG 253

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           + + E+  ++  I +P+ G I    +           P   ++       + A +    +
Sbjct: 254 VKLAERMIDRTKITAPVDGEITMVDA-EEGELVGSESPAFVML-DPDSYQVLAGLPESYV 311

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             V  G T  V+ P      +++F+ +I  +  +  +++        Y + +++T     
Sbjct: 312 NQVSDGETVDVKIPS---ALDEEFEGMIHHVGQLPPEENAKG-----YPMEIELTPEIEK 363

Query: 400 DNNIELRNGFPAEVLFTAKN 419
                +R G   +V  T + 
Sbjct: 364 Q----VRAGMYTQVNVTIEK 379


>gi|308271098|emb|CBX27708.1| hypothetical protein N47_H25300 [uncultured Desulfobacterium sp.]
          Length = 341

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 65/177 (36%), Gaps = 13/177 (7%)

Query: 198 DLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +  +++ +  +   VSQND   +      + ++L++         + +  +  +  L  A
Sbjct: 63  ESRIIRLMVNEGQEVSQNDPLLELGPSPDTHMKLKQAQGTYNAANQALKNMERKFQLRLA 122

Query: 257 --NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             + L +  + LEQ + T     S+         QK + + + G +              
Sbjct: 123 TNDQLLQTQQILEQARLTIDSMKSQ-----DIGGQKELKAEVDGLVSKVSVN-EGALVPA 176

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
             PL+++VP +    +R  V  + I ++ +G    +     A  +       + K+ 
Sbjct: 177 GAPLLQLVPRN-RLEMRLGVELEDIDNIHEGMPVDL---SRAPKQTGIVSGKVRKVS 229



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 9/122 (7%)

Query: 40  IEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-------- 90
           I+  + + G ++        I  PF   I +  V  G ++ Q  PLL             
Sbjct: 38  IDEIILAYGNVIPAPGAQTTISVPFESRIIRLMVNEGQEVSQNDPLLELGPSPDTHMKLK 97

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +     +    ++KN+        +  D L     +LE+A  + +      +G      +
Sbjct: 98  QAQGTYNAANQALKNMERKFQLRLATNDQLLQTQQILEQARLTIDSMKSQDIGGQKELKA 157

Query: 151 KV 152
           +V
Sbjct: 158 EV 159


>gi|299532187|ref|ZP_07045581.1| secretion protein HlyD [Comamonas testosteroni S44]
 gi|298719849|gb|EFI60812.1| secretion protein HlyD [Comamonas testosteroni S44]
          Length = 383

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 88/294 (29%), Gaps = 29/294 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+    + +          +++    L                     + + A     
Sbjct: 80  QALVRIDSRSYEAAVAQAQAQLANAQAQLSNSEQTQAQNRATLSASRAGLAAVEAEAQRS 139

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q +L  ++ L E+ +VS N     ER   ++T  L      +      IN+   +A    
Sbjct: 140 QAELKRVQELAERGSVSLN-----ERDKVRATSRLAATNVAKAQADIAINQEKIKATT-- 192

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                 + RD  + Q   A+ +  L   +   +   + +P  G +          Y    
Sbjct: 193 ------VGRDSLKAQVQMAEAL--LRQAQINLDNTVVHAPSDGQVSEVSVR-KGQYVAAG 243

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM +VP     ++ A     Q   V+ G   +        +R    K  + +I P   
Sbjct: 244 TQLMYVVPP--TYWVVANYKETQTARVQIGQVVSFSVDALGGLR---LKGHVLEIAPATG 298

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +      +  T  + +V+    +KI       +   LR G    V        
Sbjct: 299 SEFSVLKADNATGNFTKVVQRLPIKIAIDEGQADAARLRPGMSVIVRLDTAQKV 352



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/210 (11%), Positives = 73/210 (34%), Gaps = 24/210 (11%)

Query: 16  SLKRMTLLSIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           SL+ + ++ ++ + G++     W++  P   SV ++        V  +    +G + +  
Sbjct: 11  SLRSVLIMLVVALAGMLLVLRAWNLW-PFNSSVVTTDNAYVRGAVTVLAPQVNGYVTEVL 69

Query: 72  VENGSQILQGTPLLTFED--------------IETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           V++  Q+  G  L+  +                     +   + +    R  +   ++ L
Sbjct: 70  VKDYEQVKAGQALVRIDSRSYEAAVAQAQAQLANAQAQLSNSEQTQAQNRATLSASRAGL 129

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHS-----TCSKVFNYGISSVYRSLKMKLTRMR 172
             +  +    +   +  +E         +        S++    ++     + +   +++
Sbjct: 130 AAVEAEAQRSQAELKRVQELAERGSVSLNERDKVRATSRLAATNVAKAQADIAINQEKIK 189

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           +  + R  L+ +  +  ALL   Q +L   
Sbjct: 190 ATTVGRDSLKAQVQMAEALLRQAQINLDNT 219


>gi|238896410|ref|YP_002921148.1| multidrug resistance protein MdtN [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238548730|dbj|BAH65081.1| putative secretion protein HlyD [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 341

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 77/233 (33%), Gaps = 24/233 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     + +          ++++   + +    +++   N   +       RAL+     
Sbjct: 76  LFRIDPRPYQAMLDDAKARLTTLDAQIMLTQRTIKAQEYNAQSVAAAVERARALVKQTTS 135

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
               ++ L  +   SQ DL+Q       +  EL   + + K     +             
Sbjct: 136 TRIRLEPLVPQGFASQEDLDQARTAEKAARAELEATLLQAKQASAAV------------- 182

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                   ++      A  ++++ + E   E   + +P  G +V  ++ +   YA   +P
Sbjct: 183 ------TGVDAMVAQRAGVLAQIALAELHLEFTEVRAPFNGVVVALKT-TVGQYASALKP 235

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +  ++      Y+ A      + +V+ G  A +          + F  +++ +
Sbjct: 236 VFTLL-DDDRWYVIANFRETDLNNVRPGVAARITV---MTNHNRTFNGVVDSV 284



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/184 (10%), Positives = 51/184 (27%), Gaps = 7/184 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I +  + +  ++ +G  L   +      ++D  K  +  L   I   +  +     K
Sbjct: 56  SGRIVEMPIRDNQRVKKGDLLFRIDPRPYQAMLDDAKARLTTLDAQIMLTQRTI-----K 110

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                    +   +    L K  ++        +   + S +       +    R +LE 
Sbjct: 111 AQEYNAQSVAAAVERARALVKQTTSTRIRLEPLVPQGFASQEDLDQARTAEKAARAELEA 170

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   ++      M+        ++Q  L +      +        +   K  +  
Sbjct: 171 TLLQAKQASAAVTGVDAMVAQ--RAGVLAQIALAELHLEFTEVRAPFNGVVVALKTTVGQ 228

Query: 244 INEL 247
               
Sbjct: 229 YASA 232


>gi|148258996|ref|YP_001243581.1| HlyD family secretion protein [Bradyrhizobium sp. BTAi1]
 gi|146411169|gb|ABQ39675.1| putative HlyD-family secretion protein [Bradyrhizobium sp. BTAi1]
          Length = 334

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/300 (8%), Positives = 84/300 (28%), Gaps = 33/300 (11%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +      +   +  R  +L   +G        V       + +SL     +        
Sbjct: 51  RIEADEIDIATKYAGRVAELRADIGDLVEAGQIVARMDTRELQQSLSKAGAQAEQAQHVV 110

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
                    L+   +  ++++   ++L +    ++                         
Sbjct: 111 DQARANLVQLQTQKTLAEQEMERTRSLLQNGWTTK------------------------- 145

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + +   +A       L      + + +R        + +        ++++P AG
Sbjct: 146 ----ELADQRQQALGAATAGLAGAQAKVAEAERALEAVRHDVALYTVQIADNSLIAPKAG 201

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            I Y +  +          +  ++      Y+   +  +++  +K G  A +    Y D 
Sbjct: 202 RIQY-RLANIGEVLGAGGKVFTML-DVNYVYMDVFLPTEEVGKIKVGSEARIVLDAYPDR 259

Query: 359 REKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 + +        +  +  + + +  + + +++     + +   +R+G P      
Sbjct: 260 PIPAKVSFVASQAQFTPKTVETRSERDKLMFRIRVRVDQDRLAAHADAVRSGLPGVAYVK 319



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/149 (10%), Positives = 44/149 (29%), Gaps = 2/149 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + + + + G  +  G  +   +  E    +       +  +  +D  ++ L  L  + 
Sbjct: 65  GRVAELRADIGDLVEAGQIVARMDTRELQQSLSKAGAQAEQAQHVVDQARANLVQLQTQK 124

Query: 125 DVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            + E+  E     L +     +      +      + +  +        R++   R D+ 
Sbjct: 125 TLAEQEMERTRSLLQNGWTTKELADQRQQALGAATAGLAGAQAKVAEAERALEAVRHDVA 184

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             +  +        K   +   L     V
Sbjct: 185 LYTVQIADNSLIAPKAGRIQYRLANIGEV 213


>gi|315186586|gb|EFU20345.1| efflux transporter, RND family, MFP subunit [Spirochaeta
           thermophila DSM 6578]
          Length = 421

 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/378 (11%), Positives = 105/378 (27%), Gaps = 87/378 (23%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V++ GEI   + +  + +  SG++K   VE G ++ +G  L+  +  E    +   +   
Sbjct: 48  VAARGEIRAREEMQVV-AQASGVVKDVLVEEGERVRKGDILVRLDTSEVEGALLQAEAQR 106

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                 +  E   +  L   Y     A E   + L                  +  ++  
Sbjct: 107 AAAELAVRRE---VVNLRIAYRDASTALEEARKNL----------------ERVRELHGI 147

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                  +R         E + +  R  L+  +                  ++     +V
Sbjct: 148 GSASDEELRQAEDQVARAEEQLAAARQQLNLREGREPD---------APVPEVFPPVDLV 198

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             S+ E+R+   + +     +                                       
Sbjct: 199 VASSPEVRQAEAQLEAAREQV--------------------------------------- 219

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               E+  + + I G +                P+ ++        + A+V    +  V+
Sbjct: 220 ----ERYVVRAGITGVVSRVLV-KRGAVVAAGTPVAQLH-DDSRLEVVAQVDEVDLPKVR 273

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           +G  A VR        ++  +  +  I P++ Q            V +++ +       +
Sbjct: 274 EG--ARVRVEA-DVAPDRDLEGQVVWISPVLEQTGEGRMA----RVRIRLDE----REGV 322

Query: 404 ELRNGFPAEVLFTAKNTT 421
            +  G    V    +  T
Sbjct: 323 WI--GASCSVFIEGERRT 338


>gi|299142921|ref|ZP_07036048.1| HlyD family secretion protein [Prevotella oris C735]
 gi|298575650|gb|EFI47529.1| HlyD family secretion protein [Prevotella oris C735]
          Length = 297

 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 82/244 (33%), Gaps = 39/244 (15%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              + +   + + LR  +   Q+++     L +  A ++  L+     +     +L    
Sbjct: 85  QAQKPNTNTQIAALRQQVVKAQEEVNRYAELVKDGAANRKILDDSRSQLLVLQRQLAAQS 144

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                  R +N      ++E    +                             +  I S
Sbjct: 145 ATLGTSTRSLNAQMGTTDVEKLQVV-------------------------DQLRKCHISS 179

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           PI G ++  +      +A   +PL K V      ++RA +T +Q+Q V+ G   TV +  
Sbjct: 180 PINGVVLE-KYAQQGEFAIVGKPLFK-VADVDKLFLRAYITSQQLQKVRFGQRVTV-YAD 236

Query: 355 YADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           Y     K +  I+  I             ++ +    Y + + +     +D NI++  G 
Sbjct: 237 YGGKLRKSYPGIVAWIASKSEFTPKTILTDDERADLVYAIKVAV----KNDGNIKI--GM 290

Query: 410 PAEV 413
             EV
Sbjct: 291 YGEV 294


>gi|197296821|gb|ACH58981.1| membrane fusion component of tripartite multidrug resistance system
           [uncultured bacterium BLR2]
          Length = 391

 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 77/232 (33%), Gaps = 20/232 (8%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            ++++   +     +R    ++   K            +     +L   + ++R      
Sbjct: 62  RVSSQIAGIVVEVFARNTSRVEPGQKLLRLDDADARQALERAAANLAQTVRQVRQQTAQS 121

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           +  + + +     L   ++DL   + L  + AV+  ++      V  +   LR++  +  
Sbjct: 122 VQFDAQIAGRELELQQAEEDLRQREPLLAEQAVAGEEVRHARNAVALARTALRQSQQQSA 181

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                ++ +  E N      +          QR+                   I++P  G
Sbjct: 182 AARALVDHVSLEQNPSVLAAVAAYKDAWLHTQRSI------------------IVAPAGG 223

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I   +S          +PLM I+      ++ A    KQ+++++ G  A +
Sbjct: 224 YIAQ-RSVQLGQRIAPGEPLMSIIALQD-VWLEANFKEKQLRNLRIGQPAEI 273



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 78/237 (32%), Gaps = 14/237 (5%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL----NEDNV 56
           M+         + PA+  R  +L  I  + L+  +    +E+ V S  E         N 
Sbjct: 1   MNEAATPTAPADVPATGNRRRILLTITFVLLLLAAGWTVLEVLVLSKREKTDDAYVTGNQ 60

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-------SIKNLRCH 109
           + + S  +GI+ +    N S++  G  LL  +D +    ++            ++     
Sbjct: 61  IRVSSQIAGIVVEVFARNTSRVEPGQKLLRLDDADARQALERAAANLAQTVRQVRQQTAQ 120

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                + +     +    E+    RE  L +                ++        + +
Sbjct: 121 SVQFDAQIAGRELELQQAEEDLRQREPLLAEQAVAGEEVRHARNAVALARTALRQSQQQS 180

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF---EKNAVSQNDLNQQERIV 223
                 ++ + LE   S+L A+ +     L   +++        ++Q  +   +RI 
Sbjct: 181 AAARALVDHVSLEQNPSVLAAVAAYKDAWLHTQRSIIVAPAGGYIAQRSVQLGQRIA 237


>gi|167033378|ref|YP_001668609.1| secretion protein HlyD family protein [Pseudomonas putida GB-1]
 gi|166859866|gb|ABY98273.1| secretion protein HlyD family protein [Pseudomonas putida GB-1]
          Length = 395

 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 71/219 (32%), Gaps = 22/219 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + S    L   + ++R +Y N   L+ +    +A L   Q+D    K L +  A++ 
Sbjct: 96  EVALQSAEAKLARSVRQVRGLYSNVDSLKAQLETRQAELRKAQQDFNRRKVLADSGAIAA 155

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L                     ++ L       + A  + +     +   +  +    
Sbjct: 156 EEL------------------SHARDDLSVAQAAVNSARQQLSTSSALVDDTVVSSHPEV 197

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               + L        + T+++P+ G +   ++       Q     M ++P     +I A 
Sbjct: 198 MAAAADLRQAYLDHARTTLVAPVTGYVAK-RTVQLGQRLQPGTATMAVIPLD-QVWIDAN 255

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               Q++ ++ G    +         E K+   ++ +  
Sbjct: 256 FKETQLRDMRIGQPVEI--SADLYGSEVKYSGTVDSLGA 292



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 49/142 (34%), Gaps = 9/142 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVVEI    +G +     ++G  +  G  LL F+  ++       +V++++    + 
Sbjct: 55  VNGNVVEITPLVTGTVTSIGADDGDLVHAGQVLLQFDPADS-------EVALQSAEAKLA 107

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                +  L +  D L+   E+R+ +L     +      KV     +     L      +
Sbjct: 108 RSVRQVRGLYSNVDSLKAQLETRQAEL--RKAQQDFNRRKVLADSGAIAAEELSHARDDL 165

Query: 172 RSIYLNRLDLENKSSLLRALLS 193
                       + S   AL+ 
Sbjct: 166 SVAQAAVNSARQQLSTSSALVD 187


>gi|261211687|ref|ZP_05925974.1| membrane-fusion protein [Vibrio sp. RC341]
 gi|260839037|gb|EEX65669.1| membrane-fusion protein [Vibrio sp. RC341]
          Length = 377

 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 12/191 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +   
Sbjct: 43  IEKQAVAVGQIVPS-HAVAIKSQINGIVGEIYVHEGQHVDQGQPLIKVRPNPTPQALTDA 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              +     +++++   LD L    K  ++   ++       D   K      K  N  +
Sbjct: 102 STELMQSEANLESDLQRLDNLERLVKQQIIPANYDDYVRAKADVKAKKAEVQQKRQNLEL 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMKNLFEK 208
                +   +     ++Y               E   S   +  ++    L  MKN+  K
Sbjct: 162 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMMQLADMKNIVFK 221

Query: 209 NAVSQNDLNQQ 219
            +VS++D  Q 
Sbjct: 222 GSVSEHDAAQL 232



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 79/219 (36%), Gaps = 23/219 (10%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  ++    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 98  LTDASTELMQSEANLESDLQRLDNLERLVKQQIIPANYDDYVRAKADVKAKKAEVQQKRQ 157

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHS 325
                 S    + + +   T+ +PI+GTI+  +              Q +  +M++    
Sbjct: 158 NLELIRSGEASIGQAKLSSTLYAPISGTILNIKV-EVGEPIISTESSQAATEMMQLA-DM 215

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           K    +  V+      +  G  AT+    Y    E+  +  + K+     + +N    + 
Sbjct: 216 KNIVFKGSVSEHDAAQLNVGMPATITVAPYP---EQSIQGQVRKVAIQSERLNNPENKEN 272

Query: 386 Y-----YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 +EV +    +     +I LR+GF A    T + 
Sbjct: 273 KSFDNGFEVEIAQLQI---PESITLRSGFSASAQITLQR 308


>gi|218461592|ref|ZP_03501683.1| hypothetical protein RetlK5_19767 [Rhizobium etli Kim 5]
          Length = 379

 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 113/349 (32%), Gaps = 21/349 (6%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET-TDLIDLKKVSIKNLRCHIDTEKSA 116
            + +P  G I +  ++ GS +  G  L    +      ++   +         +   K  
Sbjct: 13  VVNAPIDGTIAEEPLKAGSPVKAGQALAEIRNTRVNRAILASLEADRNTALERVAALKKE 72

Query: 117 LDFLNNKYDVLEKAFES-REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            + L    + L    E  ++  + +   +      KV       +   +           
Sbjct: 73  REELTALREELSARLEVYKQTTIANLEREVEILTKKVEMSQAHDLVAQVD---------L 123

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
             R+ LE+K  L   L+ + +          E + ++ + L Q+   V +      +  +
Sbjct: 124 SRRVQLESKGILTHRLVDAARAAGAATGGEVEISNLTVDQLEQRLNAVRQGIFVFGDGQN 183

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           +     +  +E+    N +  + + E      + Q+    E  ++  LE      T  +P
Sbjct: 184 DVPYSRQREDEVVVRIN-DLNSRIAENETRATEVQKQLVKEADRVNSLESA----TATAP 238

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G +      S SN    +  LM+++   +  ++   V       +  G  A VR    
Sbjct: 239 FDGVVWTRSIVSGSNVVL-NDELMRLL-DCRELFVDILVPEVNYDEIYPGLVAQVRLFGR 296

Query: 356 ADIREKK---FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           +DI +      +     ++           TQ    + +++     +++
Sbjct: 297 SDIFKGTVISVRGNSASVEADSFAASLPPSTQRNARIRVRLDPSFMNND 345


>gi|152971816|ref|YP_001336925.1| multidrug resistance protein MdtN [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|330011037|ref|ZP_08306964.1| efflux pump membrane protein [Klebsiella sp. MS 92-3]
 gi|150956665|gb|ABR78695.1| putative secretion protein HlyD [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|328534326|gb|EGF60938.1| efflux pump membrane protein [Klebsiella sp. MS 92-3]
          Length = 341

 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 77/233 (33%), Gaps = 24/233 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     + +          ++++   + +    +++   N   +       RAL+     
Sbjct: 76  LFRIDPRPYQAMLDDAKARLTTLDAQIMLTQRTIKAQEYNAQSVAAAVERARALVKQTTS 135

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
               ++ L  +   SQ DL+Q       +  EL   + + K     +             
Sbjct: 136 TRIRLEPLVPQGFASQEDLDQARTAEKAARAELEATLLQAKQASAAV------------- 182

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                   ++      A  ++++ + E   E   + +P  G +V  ++ +   YA   +P
Sbjct: 183 ------TGVDAMVAQRAGVLAQIALAELHLEFTEVRAPFNGVVVALKT-TVGQYASALKP 235

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +  ++      Y+ A      + +V+ G  A +          + F  +++ +
Sbjct: 236 VFTLL-DDDRWYVIANFRETDLNNVRPGVAARITV---MTNHNRTFNGVVDSV 284



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/184 (10%), Positives = 51/184 (27%), Gaps = 7/184 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I +  + +  ++ +G  L   +      ++D  K  +  L   I   +  +     K
Sbjct: 56  SGRIVEMPIRDNQRVKKGDLLFRIDPRPYQAMLDDAKARLTTLDAQIMLTQRTI-----K 110

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                    +   +    L K  ++        +   + S +       +    R +LE 
Sbjct: 111 AQEYNAQSVAAAVERARALVKQTTSTRIRLEPLVPQGFASQEDLDQARTAEKAARAELEA 170

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   ++      M+        ++Q  L +      +        +   K  +  
Sbjct: 171 TLLQAKQASAAVTGVDAMVAQ--RAGVLAQIALAELHLEFTEVRAPFNGVVVALKTTVGQ 228

Query: 244 INEL 247
               
Sbjct: 229 YASA 232


>gi|319639169|ref|ZP_07993921.1| multidrug resistance protein A [Neisseria mucosa C102]
 gi|317399580|gb|EFV80249.1| multidrug resistance protein A [Neisseria mucosa C102]
          Length = 396

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 84/273 (30%), Gaps = 31/273 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F          L   + + +         + +  L +A L+  Q DL   ++L    AVS
Sbjct: 102 FQLAYDRAQNELIQAIRQNKQQTAVNSKAKAQVLLRKADLARAQADLRRRESLAGTEAVS 161

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +L+     V ++   L+    E+ +    +                         Q  
Sbjct: 162 GEELSHARAAVVQAQAALKAVEAEEVSAQAALGSNIPLRQ-----------------QPA 204

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +S +       ++  I SPI+G I             Q  P+M +VP S+  ++ A
Sbjct: 205 VQTAISHIKDAWLNLQRTQIRSPISGQIAKRNV-QVGQRIAQGTPMMAVVPLSE-LWVDA 262

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQ 384
                Q++ +K G    +    Y       +   +  +          + +Q       +
Sbjct: 263 NFKESQLRKMKIGQPVEMTADLYGSKV--VYHGKVMGLSAGTGSAFSLLPAQNATGNWIK 320

Query: 385 EYYEVILKITDLAFSDNNIELRNG--FPAEVLF 415
               V ++I+  A       LR G     +V  
Sbjct: 321 VVQRVPVRISLDAKELQQNPLRVGLSMTVKVDV 353



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/186 (10%), Positives = 68/186 (36%), Gaps = 11/186 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET-----TDLIDLKKVSIKNL 106
              ++V I    +G ++K   ++   + +G  L+  +D +          +L +   +N 
Sbjct: 62  VAGHLVMITPQVNGTVRKVMYDDTDVVKKGDVLVALDDSDFQLAYDRAQNELIQAIRQNK 121

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLL---DFLGKYHSTCSKVFNYGISSVYRS 163
           +      K+    L  K D+     + R  + L   + +     + ++       +  ++
Sbjct: 122 QQTAVNSKAKAQVLLRKADLARAQADLRRRESLAGTEAVSGEELSHARAAVVQAQAALKA 181

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQE 220
           ++ +    ++   + + L  + ++  A+       L + +          +++ ++   +
Sbjct: 182 VEAEEVSAQAALGSNIPLRQQPAVQTAISHIKDAWLNLQRTQIRSPISGQIAKRNVQVGQ 241

Query: 221 RIVYKS 226
           RI   +
Sbjct: 242 RIAQGT 247


>gi|297538249|ref|YP_003674018.1| RND family efflux transporter MFP subunit [Methylotenera sp. 301]
 gi|297257596|gb|ADI29441.1| efflux transporter, RND family, MFP subunit [Methylotenera sp. 301]
          Length = 455

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 69/220 (31%), Gaps = 28/220 (12%)

Query: 215 DLNQQERIVYKSTLELREN---IHEQKNMLRHINE----------LYDEANLEFANYLKE 261
            + + +  +  +  ++ +    I E  + L+ + E             E +   A Y + 
Sbjct: 140 QVLRSKATLASAIAKVAQTEATIKETSSALQRLEEVSRLSGGKVPSKSELDTGRAAYDRA 199

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLM 319
           ++ DL   +    D  + L+  +    + +I++P  G I+       +  A   Q   L 
Sbjct: 200 VADDLS-AKAGVNDARAALSTDQINLSKASIVAPSDGVILTRAVDPGNAVAASLQAVTLF 258

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +        +   V    +  VK    AT     Y   +       +     I      
Sbjct: 259 TMAEDLTKLRLWVYVDEADVGSVKLDQDATFTVSAYPTRKFPARITRVGFGSTITDN--- 315

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                    V+  +T L   + ++ LR G  A     AK 
Sbjct: 316 ---------VVTYLTYLDVDNTDLSLRPGMTATATIKAKQ 346



 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 73/218 (33%), Gaps = 26/218 (11%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITW----SILL------------PIEISVSSSGEIL 51
            L     ++L     L I+ I G + W    +                + ++V+++G I 
Sbjct: 38  KLAWYRRSTLWIGLALLIMMIAGFLYWQGKRAAEALPKYTTQEVSRGNLTLTVTANGTIQ 97

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                + I S  SG ++K  V+    + +G  L+  +  + +D +   K ++ +    + 
Sbjct: 98  P-TRSINIGSELSGTVRKVNVDVNDVVKKGQVLVELDTSKLSDQVLRSKATLASAIAKVA 156

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ +   ++    LE+         +  L           + G ++  R++   L+  
Sbjct: 157 QTEATIKETSSALQRLEE---------VSRLSGGKVPSKSELDTGRAAYDRAVADDLSAK 207

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +   R  L      L         D  ++    +  
Sbjct: 208 AGVNDARAALSTDQINLSKASIVAPSDGVILTRAVDPG 245


>gi|37521473|ref|NP_924850.1| hypothetical protein glr1904 [Gloeobacter violaceus PCC 7421]
 gi|35212470|dbj|BAC89845.1| glr1904 [Gloeobacter violaceus PCC 7421]
          Length = 909

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/398 (11%), Positives = 109/398 (27%), Gaps = 81/398 (20%)

Query: 65  GIIKKFQVENGSQ--ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           G++ K   + G Q  I  GT L     ++T + ++     ++     + T          
Sbjct: 548 GVLDKLYFKGGDQKLIKAGTTLALLRSVDTQNQVNTGLSDVRTREAALIT---------- 597

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                       +E+L   L        +V    +S   + + +               +
Sbjct: 598 -----------AQEELRKLLSMPRPEEVQVARDQVSVARQEVSVA--------------K 632

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           ++    ++      ++      L ++  VS       +R      + +        +  +
Sbjct: 633 SQLVTAKSKADFSAREAERNLKLSKEGVVSDQVYENAKREAETERIGVETAQESLASAGQ 692

Query: 243 HINELYDEANLEFA----NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            + +      L  A      +      +EQ +        +     +      ++ P  G
Sbjct: 693 RLEQAQSNLRLVMAGPHPQEISAARSKVEQERAELKRVQDQYAYYRQQLNFTKVVMPFNG 752

Query: 299 TIVYNQS-------FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
            I+               +    +Q   +I    ++   +A          K G    V+
Sbjct: 753 YIITPNLDWKVGSRMQVGDVLGVAQHASRITGTIQMPEYQAG------DGFKPGGEVEVK 806

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNN-------------------LQTQEYYEVILK 392
              Y     + F   +  I+P+ +  + N                     T  Y  V++ 
Sbjct: 807 LWAYP---TRSFAGKVASIEPVATSYNKNDPQNVTKSVEYGADPTELLKSTTRYVNVVVD 863

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                F     E++ G       T +   + Q   HP+
Sbjct: 864 -----FPQAKAEMKPGMTGYAKVTGETQPVFQAFSHPL 896


>gi|312889206|ref|ZP_07748762.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
 gi|311298311|gb|EFQ75424.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
          Length = 369

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 61/205 (29%), Gaps = 17/205 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +S +D+  +         E        +      N LY + +   A  L  ++   +  +
Sbjct: 98  ISNDDILAKGAQADAMIAEANAGFINAQKDFDRFNALYKQQSAS-AKELDNVTLQYKSAK 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                       +  T     + +P AG +      +  + A    PL+ I   S    +
Sbjct: 157 ARLDAAKQARNEVNATLSYTNLTAPFAGLVTQKMIDA-GSMANPGMPLLTI-EQSGSYQV 214

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V   +I  + +G  ATV       +        I +I     +   N   Q  Y + 
Sbjct: 215 SVSVPESEIGLITEGTPATVTISAAHQV----INGKITQIG----KSSQNSGGQ--YIIK 264

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF 415
           + I D         L  G  A V  
Sbjct: 265 IHIPDYQKQG----LFAGMYANVAI 285



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 9/114 (7%)

Query: 50  ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +     +  ++S        G I   +V  G ++ +G  LLT     + D I  K     
Sbjct: 56  LSVSGVIEAVQSANISTRVMGYITSIKVNVGDRVSKGQLLLTI----SNDDILAKGAQAD 111

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +    +          ++++ L K   +  ++L +   +Y S  +++     +
Sbjct: 112 AMIAEANAGFINAQKDFDRFNALYKQQSASAKELDNVTLQYKSAKARLDAAKQA 165


>gi|315266187|gb|ADT93040.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS678]
          Length = 410

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 86/272 (31%), Gaps = 24/272 (8%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +S   S+  +++         L  E K   L A + S  +   +   L      S   +
Sbjct: 57  QASKLVSVGAQVSGQILSLPLALGDEVKKGDLIAQIDSLAQQNNLKDALA-----SLKSI 111

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           N Q R       + +     Q+ ML        +  +  AN L     DLEQ +      
Sbjct: 112 NAQFRAKQAQIRQAKLEFSRQQQMLADKASSRADYEVADAN-LTVYQADLEQLEAQKQQA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAKV 334
              +           I +P+ GT+VY+           +Q    IV         ++A++
Sbjct: 171 EINVDSARIDLGYTKITAPMDGTVVYSAV-EVGQTVNANQTTPTIVEMAQLDTMTVKAQI 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-------IISQQDNNLQTQEYY 387
           +   + +V  G      F          ++ I+  I+P         S   ++     YY
Sbjct: 230 SEADVVNVHPGQAVY--FTVLGKPNHP-YRGILRAIEPGPISMDGDDSNMSSSDSDAIYY 286

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +  +      + +  LR G  A+V      
Sbjct: 287 HGLFDV-----ENPDRTLRIGMTAQVSIVLAK 313



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G +     +V + +  SG I    +  G ++ +G  +   + +   + +   
Sbjct: 46  IENSVLANGMLQAS-KLVSVGAQVSGQILSLPLALGDEVKKGDLIAQIDSLAQQNNLKDA 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             S+K++      +++ +           K   SR++Q+L       +   +V +  ++ 
Sbjct: 105 LASLKSINAQFRAKQAQI--------RQAKLEFSRQQQMLADKASSRADY-EVADANLTV 155

Query: 160 VYRSLKMKLTRMRSIYLN 177
               L+    + +   +N
Sbjct: 156 YQADLEQLEAQKQQAEIN 173


>gi|296100749|ref|YP_003610895.1| Macrolide-specific efflux protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295055208|gb|ADF59946.1| Macrolide-specific efflux protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 383

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 84/257 (32%), Gaps = 24/257 (9%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQK-DLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           ++R +Y+ + +   K  LL  +  + Q+ +L   K               Q+R      L
Sbjct: 71  QLRKLYVRQGERVKKGQLLAEIDPTLQESELRNTKAQLASA-------RAQKRSAQAMLL 123

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             R+ +  Q+ M R  + +  E     + Y  ++ + +  ++   A     +   +    
Sbjct: 124 RYRQELDRQRLMQRDGSGVRSEFEQARSQYAVQV-QQIAVSEAQIAQAEMAVKTAQANLS 182

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
              I++P+ G ++             SQ  P + ++       ++ +++   +Q +  G 
Sbjct: 183 YTRIVAPVDGEVLGI-VTREGQTIVSSQTAPTILVLADLDTMQVQTRISEADVQKIHPGQ 241

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQD-------NNLQTQEYYEVILKITDLAFS 399
             +       D R       ++       +         N      YY    ++ +    
Sbjct: 242 PLSFYVIANPDKRYASTMGYVQPAPQDAMEASGERGMGGNAQAMAVYYTGTFEVPNAGR- 300

Query: 400 DNNIELRNGFPAEVLFT 416
               EL+    A+V   
Sbjct: 301 ----ELKTSMTAQVFIQ 313



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 49/138 (35%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE  V  +G +     V  + +  +G ++K  V  G ++ +G  L   +       +   
Sbjct: 46  IEKVVLVTGILKPAVQV-NVGAQVNGQLRKLYVRQGERVKKGQLLAEIDPTLQESELRNT 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  + + R    + ++ L  L  + ++  +    R+   +    +   +   V    I+ 
Sbjct: 105 KAQLASARAQKRSAQAML--LRYRQELDRQRLMQRDGSGVRSEFEQARSQYAVQVQQIAV 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
               +      +++   N
Sbjct: 163 SEAQIAQAEMAVKTAQAN 180


>gi|21241412|ref|NP_640994.1| multidrug resistance efflux pump [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21106747|gb|AAM35530.1| multidrug resistance efflux pump [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 362

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 87/305 (28%), Gaps = 29/305 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V + A   R + L     + ++   +     + +   +L     +  S      +  
Sbjct: 76  QVPVQDFAHVKRGQLLARIDDRIYAQQLEQAKAQVQTAQANLANWDQQRHSAEATIAEQR 135

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  +A     +      + L  +  VS+ D               R+     +    
Sbjct: 136 AALSSNQAQRDRTRSAYARTQQLASQQLVSEQD---------------RDTAFAARAQAE 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                   A        + ++ +    +   A+  + + +     +   IL+P  G +  
Sbjct: 181 AGVAQARAAVQAAEENARGVTVNRAALEAAVANAQAAVQLARINLDNTRILAPRDGQLGQ 240

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP     +I A     Q+  ++ G  A+       + R   
Sbjct: 241 LGVR-QGAYVTNGTQLMSLVP--DTLWIVANFKETQMARIRIGQRASFTVDALDNAR--- 294

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVL 414
               ++ I P    +      +  T  + ++  +I      D +      LR G    V 
Sbjct: 295 LHGRVQDISPAAGSEFSVLPADNATGNFVKIAQRIPLRISVDPDQPLAPRLRPGMSVVVA 354

Query: 415 FTAKN 419
               +
Sbjct: 355 VDTDS 359



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 56/174 (32%), Gaps = 18/174 (10%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSI-----------LLPIEISVSSSGEILNE 53
           M      + PA  +R     + G+IG    ++           L P   ++  +   +  
Sbjct: 1   MNTPADSSPPADRQRRRRRRLAGVIGFGGLALIGVALVLYAWRLPPFVSAIERTENAMVH 60

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             +  I    SG + +  V++ + + +G  L   +D        +    ++  +  + T 
Sbjct: 61  GQITVIAPQVSGYVTQVPVQDFAHVKRGQLLARIDD-------RIYAQQLEQAKAQVQTA 113

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           ++ L   + +    E     +   L     +   T S        +  + +  +
Sbjct: 114 QANLANWDQQRHSAEATIAEQRAALSSNQAQRDRTRSAYARTQQLASQQLVSEQ 167


>gi|261210944|ref|ZP_05925234.1| multidrug resistance efflux pump [Vibrio sp. RC341]
 gi|260839919|gb|EEX66519.1| multidrug resistance efflux pump [Vibrio sp. RC341]
          Length = 368

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 67/221 (30%), Gaps = 24/221 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + F   + +    L+      ++        +      R  +++ +K++   + L EK 
Sbjct: 90  PRPFELAVKAAKFDLQQAAQSYQADSAAISVAQANEVAARVKVTNAKKNVERNRVLAEKG 149

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +SQ         +     EL             + +   E      +            
Sbjct: 150 TISQ-------ATMDNILAELETAQAGLAQASSALEKAKQEFGPRGID------------ 190

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                  +++            +++P  G I      +  +YA   QPL+  + ++   +
Sbjct: 191 NPEIQSVLNRQEQALLNLNHTKLIAPADGVITNMNV-AVGDYAAAGQPLLTFI-NNNNLW 248

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           + A V    + H+K G    + F  Y     + F   I  I
Sbjct: 249 LTAMVRENSLAHLKSGDKVKIVFDAYP---GEVFTGQISSI 286



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/183 (9%), Positives = 54/183 (29%), Gaps = 3/183 (1%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           ++      K +   +  R     I  ++  + W   L  +     + +      ++ I  
Sbjct: 4   NNTKTSAEKSDKKINQARSFTYYIFALVAAL-WLYTLWADRMTPMTDQARVNGQLIRISP 62

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             SG I +  + N S +  G  L+T +       +   K  ++        + +A+    
Sbjct: 63  EVSGPIAQVHITNNSSVKTGDELVTIDPRPFELAVKAAKFDLQQAAQSYQADSAAISVAQ 122

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                      + ++ +     +  +    +    + ++   L+     +          
Sbjct: 123 ANEVAARVKVTNAKKNV--ERNRVLAEKGTISQATMDNILAELETAQAGLAQASSALEKA 180

Query: 182 ENK 184
           + +
Sbjct: 181 KQE 183


>gi|56551697|ref|YP_162536.1| secretion protein HlyD family protein [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|56543271|gb|AAV89425.1| secretion protein HlyD family protein [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 348

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 66/239 (27%), Gaps = 32/239 (13%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L  +   +Q +  Q +  V ++  E            + +            + ++  +
Sbjct: 105 ELRAQRDAAQANFEQAQESVRRAEAEQAAAHASTGLAAQQLMHTKQMVAQSLVSDMELQN 164

Query: 264 RDLEQNQRTFADEMSK----------------LTILEKTREQKTILSPIAGTIVYNQSFS 307
                  R  ++E S+                +  L+    + TI +P +G I   +   
Sbjct: 165 SQTAYTTRKLSEEASQHNVAAAKEAVKAASAQIAGLDANLAEMTIRAPTSGQI-EYRIAE 223

Query: 308 SSNYAQQSQPLMKIV-PHSKLTYI--RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +   Q   L  ++ P      +   + V       +  G  A ++     D       
Sbjct: 224 KGSVLGQGGRLASLLDPSDIYLTVFFESAVA----GKLHVGDEARIKLDAMNDR---LVP 276

Query: 365 AIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           A I  + P         +    + +  Y V L+I           L+ G         +
Sbjct: 277 AQISFVSPEAQFTPKFVETKTEREKLVYRVKLRIMPDTVHRLGGVLKAGMTGIGYVRTE 335



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 82/306 (26%), Gaps = 20/306 (6%)

Query: 21  TLLSIIGIIGLITWSIL-------LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
            L+   G  G   W            IE    S+G +  E    ++ + ++G I      
Sbjct: 33  ILVICAGFGGFRLWHYFEHKNDLPPHIEG---SNGRL--EMTRFDVAAKYAGRITDLSFH 87

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L   +D E     D  + + +  +  +   ++     +    +  +    
Sbjct: 88  EGDVVQTGQILAHQDDSELRAQRDAAQANFEQAQESVRRAEAEQAAAHASTGLAAQQLMH 147

Query: 134 REEQLLDFLGKYHSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            ++ +   L       +    +     S   S         ++      +    + L  +
Sbjct: 148 TKQMVAQSLVSDMELQNSQTAYTTRKLSEEASQHNVAAAKEAVKAASAQIAGLDANLAEM 207

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                    +   + EK +V    L Q  R+               ++ +     + DEA
Sbjct: 208 TIRAPTSGQIEYRIAEKGSV----LGQGGRLASLLDPSDIYLTVFFESAVAGKLHVGDEA 263

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            ++       +           A    K    +  RE+      +   I+ +        
Sbjct: 264 RIKLDAMNDRLVPAQISFVSPEAQFTPKFVETKTEREKLVYR--VKLRIMPDTVHRLGGV 321

Query: 312 AQQSQP 317
            +    
Sbjct: 322 LKAGMT 327


>gi|152990415|ref|YP_001356137.1| acriflavin resistance AcrA/AcrE family protein [Nitratiruptor sp.
           SB155-2]
 gi|151422276|dbj|BAF69780.1| acriflavin resistance protein, AcrA/AcrE family [Nitratiruptor sp.
           SB155-2]
          Length = 262

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 73/237 (30%), Gaps = 53/237 (22%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            + L         ++   +    + +    + L++K  VS+ +L Q E +   +      
Sbjct: 72  QVELMISQARLAIAMNENMYEFAKVNYMRHQKLYKKGMVSKFELEQMELMYKNTK----- 126

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                                   N ++   + L Q +   A+ + +   L+       I
Sbjct: 127 ------------------------NMVEIAKKQLAQAKAKLAEVLHQYEYLK-------I 155

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G I+               P M +        I A+++   ++++  G   TV  
Sbjct: 156 KAPNDGVIIQKMV-KEGQLTVPGYPGMVLT-TLDNLKIEAEISESNLKNIHIGQEVTVEV 213

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           P        K  AII   +P+  +          +++ +     +F     EL  G 
Sbjct: 214 PSVGFETVGKVSAIIPAANPMTHK----------FKIKV-----SFDKKGAELIPGM 255



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 59/174 (33%), Gaps = 13/174 (7%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            +  +   +  SG +   D+   I + F G ++K  V  G  + +G  L   +  E    
Sbjct: 11  SIALLAKGLELSGYVK-SDDTKMIGTRFMGYVEKVYVSEGDWVKKGQILYKIDSKEIDLA 69

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
               ++ I   R  I   ++  +F    Y   +K ++         + K+     ++   
Sbjct: 70  KSQVELMISQARLAIAMNENMYEFAKVNYMRHQKLYKK------GMVSKFELEQMELMYK 123

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
              ++    K +L + ++       L         L      D  +++ + ++ 
Sbjct: 124 NTKNMVEIAKKQLAQAKA------KLAEVLHQYEYLKIKAPNDGVIIQKMVKEG 171


>gi|296160212|ref|ZP_06843031.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
 gi|295889686|gb|EFG69485.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
          Length = 329

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 87/255 (34%), Gaps = 29/255 (11%)

Query: 173 SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLEL 230
            +Y  + ++      +  A +S+++  L   +N    N VS Q DL++++  + ++   +
Sbjct: 85  RLYRQQTEIDRTNLQVATAQISANESTLAAARN----NVVSDQFDLSEKQLDLGRAENLV 140

Query: 231 REN-IHEQKNMLRHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTRE 288
           + N I  Q   L    E    A L     L E++ + +   +   A   +KL + E    
Sbjct: 141 KGNAIPRQTRDLAFTAERQSAATLAHDKALVEVASNNIVLARANQAAADAKLKLDEVMLS 200

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY---IRAKVTPKQIQHVKKG 345
              + +P  G I   +       A     +  +           +RA V    I  V+  
Sbjct: 201 YTVLRAPFDGVI-AVREAELGQLAGSGVAIFTL----DELDHVWLRAYVNEPDIGKVRLN 255

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSD 400
              TV    YA          I  I P        ++T        Y V + I +     
Sbjct: 256 EPVTVTTDTYAGKTY---HGRISFISPQAEFTPKTVETHAERVTLVYRVRIDIDNPT--- 309

Query: 401 NNIELRNGFPAEVLF 415
              EL  G PA+   
Sbjct: 310 --HELLPGMPADATI 322


>gi|264678347|ref|YP_003278254.1| secretion protein HlyD [Comamonas testosteroni CNB-2]
 gi|262208860|gb|ACY32958.1| secretion protein HlyD [Comamonas testosteroni CNB-2]
          Length = 407

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 89/294 (30%), Gaps = 29/294 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+    + +          +++    L                     + + A     
Sbjct: 104 QALVRIDSRSYEAAVAQAQAQLANAQAQLSNSEQTQAQNRATLSASRAGLAAVEAEAQRS 163

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q +L  ++ L E+ +VS N     ER   ++T  L      +      IN+   +A +  
Sbjct: 164 QAELKRVQELAERGSVSLN-----ERDKVRATSRLAATNVAKAQADIAINQEKIKATI-- 216

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                 + RD  + Q   A+ +  L   +   +   + +P  G +          Y    
Sbjct: 217 ------VGRDSLKAQVQMAEAL--LRQAQINLDNTVVHAPSDGQVSEVSVR-KGQYVAAG 267

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM +VP     ++ A     Q   V+ G   +        +R    K  + +I P   
Sbjct: 268 TQLMYVVPP--TYWVVANYKETQTARVQIGQVVSFSVDALGGLR---LKGHVLEIAPATG 322

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +      +  T  + +V+    +KI       +   LR G    V        
Sbjct: 323 SEFSVLKADNATGNFTKVVQRLPIKIAIDEGQADAARLRPGMSVIVRLDTSQKV 376



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/210 (11%), Positives = 73/210 (34%), Gaps = 24/210 (11%)

Query: 16  SLKRMTLLSIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           SL+ + ++ ++ + G++     W++  P   SV ++        V  +    +G + +  
Sbjct: 35  SLRSVLIMLVVALAGMLLVLRAWNLW-PFNSSVVTTDNAYVRGAVTVLAPQVNGYVTEVL 93

Query: 72  VENGSQILQGTPLLTFED--------------IETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           V++  Q+  G  L+  +                     +   + +    R  +   ++ L
Sbjct: 94  VKDYEQVKAGQALVRIDSRSYEAAVAQAQAQLANAQAQLSNSEQTQAQNRATLSASRAGL 153

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHS-----TCSKVFNYGISSVYRSLKMKLTRMR 172
             +  +    +   +  +E         +        S++    ++     + +   +++
Sbjct: 154 AAVEAEAQRSQAELKRVQELAERGSVSLNERDKVRATSRLAATNVAKAQADIAINQEKIK 213

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           +  + R  L+ +  +  ALL   Q +L   
Sbjct: 214 ATIVGRDSLKAQVQMAEALLRQAQINLDNT 243


>gi|196047725|ref|ZP_03114927.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|225866546|ref|YP_002751924.1| hypothetical protein BCA_4678 [Bacillus cereus 03BB102]
 gi|196021446|gb|EDX60151.1| conserved hypothetical protein [Bacillus cereus 03BB108]
 gi|225785731|gb|ACO25948.1| conserved hypothetical protein [Bacillus cereus 03BB102]
          Length = 217

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ +D  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 57  KLTDWKAEVGKDYNEN-----DKLGAVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 110

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 111 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LSGKVEQVGL 166

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 167 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 216


>gi|162449380|ref|YP_001611747.1| RND family efflux transporter [Sorangium cellulosum 'So ce 56']
 gi|161159962|emb|CAN91267.1| RND family efflux transporter [Sorangium cellulosum 'So ce 56']
          Length = 402

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 4/193 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +E  V +SG +     V  + +  SG++       G ++  G  L+  +D E   
Sbjct: 38  AARKDLEQRVVASGRVRVPTRVQ-VAAQVSGLVVAVGAIEGQRVKAGDLLVQIDDAEARA 96

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST---CSK 151
            +   K ++      ++  +     +  +     +    R E  L  + +  ++      
Sbjct: 97  AVSQAKAAVDQASARVEQLRRVGAIVATEALRQAETNLERTEVELARVRELSASGAVAQA 156

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             +    SV  +   K+        +     +    L ALL +  + +     L +   V
Sbjct: 157 ELDNARQSVELARAQKVAAEAQRIASTPMGADSRVALTALLQAQAQHVGATVRLAQTRIV 216

Query: 212 SQNDLNQQERIVY 224
           +  D     R V 
Sbjct: 217 AHQDGVVLTRSVE 229



 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/333 (13%), Positives = 98/333 (29%), Gaps = 42/333 (12%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +      DL++  + + R  + T +  +    +   V   A E +  +  D L +     
Sbjct: 35  VAVAARKDLEQRVVASGRVRVPT-RVQVAAQVSGLVVAVGAIEGQRVKAGDLLVQIDDAE 93

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           ++       +       ++ ++R +    +            L   + +L  ++ L    
Sbjct: 94  ARAAVSQAKAAVDQASARVEQLRRVGA--IVATEALRQAETNLERTEVELARVRELSASG 151

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           AV+Q +L+   + V            E     +   E    A+       +     L Q 
Sbjct: 152 AVAQAELDNARQSV------------ELARAQKVAAEAQRIASTPMGADSRVALTALLQA 199

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q       ++         Q  I++   G ++  +S    +  Q ++ L+ +        
Sbjct: 200 Q-------AQHVGATVRLAQTRIVAHQDGVVLT-RSVEPGDVVQPARTLIVLAADGSPQL 251

Query: 330 IRAKVTP--KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
           +     P  + +  +  G  A      Y       F A +  I P I  Q  ++      
Sbjct: 252 V---FQPDERNLAWIALGQKARASADAYPQQ---VFDAEVSYIAPSIDPQRGSV------ 299

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           EV L +           L       +  +    
Sbjct: 300 EVRLAVPSA-----PAFLLPDMTVSIDLSVARR 327


>gi|329848772|ref|ZP_08263800.1| hlyD family secretion family protein [Asticcacaulis biprosthecum
           C19]
 gi|328843835|gb|EGF93404.1| hlyD family secretion family protein [Asticcacaulis biprosthecum
           C19]
          Length = 336

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 61/168 (36%), Gaps = 12/168 (7%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +  ++G++  E  V+EI +  +GI+++  V+ G  + +G  L   ED ++   ++  + +
Sbjct: 58  AALAAGKVDVEGGVIEIAARRAGIVEEVYVQEGDMVTKGQILAKQEDRDSILAVNSSRAA 117

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +      +   +  +     +YD L K            L   +    +  +    ++  
Sbjct: 118 VTQAESQLALTQVTITTAQREYDRLAK------------LAPSNFVAQQKLDQARDAIAT 165

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +     T+  ++   R  L      L         D  +++   +   
Sbjct: 166 AQATLGTQQAAVATARAQLAQSQYNLELTTVRAPMDGKIIRRYAQPGV 213



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 74/247 (29%), Gaps = 49/247 (19%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR- 172
           K+A+    + Y  L       E  +++   +      +V+      V +   +     R 
Sbjct: 47  KAAVKAPPSPYAALAAGKVDVEGGVIEIAARRAGIVEEVYVQEGDMVTKGQILAKQEDRD 106

Query: 173 ------SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                 S        E++ +L +  +++ Q++   +  L   N V+Q  L+Q    +  +
Sbjct: 107 SILAVNSSRAAVTQAESQLALTQVTITTAQREYDRLAKLAPSNFVAQQKLDQARDAIATA 166

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L                                       Q   A   ++L   +  
Sbjct: 167 QATLGTQ------------------------------------QAAVATARAQLAQSQYN 190

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            E  T+ +P+ G I   + ++       +     +  + P      +R+++    I  V 
Sbjct: 191 LELTTVRAPMDGKI--IRRYAQPGVGASTLNVSNMFDLEPSI-PHIVRSEIVESAIPLVA 247

Query: 344 KGYTATV 350
            G    +
Sbjct: 248 VGQEVEI 254


>gi|294664225|ref|ZP_06729601.1| cation efflux system protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292606000|gb|EFF49275.1| cation efflux system protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 416

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 69/193 (35%), Gaps = 19/193 (9%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEA--NLEFANYLKEISRDLEQNQRTFADEMS 278
              Y    + R  + + +  L     L  ++          ++     + + R  +D ++
Sbjct: 163 ASAYSDAGKARATLEQARLELARQKALAADSISAARGLQAAQQAFDSAQNDARAASDRLA 222

Query: 279 KLTILEKTR--EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
           +L +  + R   +  + +PIAG +V   +     +   +  LM  V      ++ A V  
Sbjct: 223 QLGVAAQARSHRRYVVRAPIAGRVVDLSAALGGFWNDTAASLMT-VADLSQVWLTASVPE 281

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           ++I  V +G   T     Y   R   F   ++ +D ++      L      +V +     
Sbjct: 282 REIGQVFEGQPVTASLDAYPGQR---FAGHVQHLDDLLDPATRTL------KVRV----- 327

Query: 397 AFSDNNIELRNGF 409
           A  + +  L+ G 
Sbjct: 328 ALENRDGLLKPGM 340



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 42/144 (29%), Gaps = 10/144 (6%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
           E+L E  V  +  P +G +       G  +  G  L   +  E               + 
Sbjct: 120 EVLPERLVRVV-PPLAGRVVALPKTLGDTVRVGDVLCVLDSAELASAYS------DAGKA 172

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
               E++ L+    K    +    +R  Q            ++  +  ++ +        
Sbjct: 173 RATLEQARLELARQKALAADSISAARGLQAAQQAFDSAQNDARAASDRLAQLG---VAAQ 229

Query: 169 TRMRSIYLNRLDLENKSSLLRALL 192
            R    Y+ R  +  +   L A L
Sbjct: 230 ARSHRRYVVRAPIAGRVVDLSAAL 253


>gi|237654691|ref|YP_002891005.1| Cd(II)/Pb(II)-responsive transcriptional regulator [Thauera sp.
           MZ1T]
 gi|237625938|gb|ACR02628.1| Cd(II)/Pb(II)-responsive transcriptional regulator [Thauera sp.
           MZ1T]
          Length = 517

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 66/190 (34%), Gaps = 22/190 (11%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           +       I E     +        E +R L +  R     +  L +  +   ++   +P
Sbjct: 172 QSTGEELRIAERLARQSATEDPVASESARRLAEATRA---RLRNLEVAGQAGARQVFHAP 228

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           ++G ++  ++          + L +I   SK+  I A V  + +  V+ G  A V    Y
Sbjct: 229 VSGVVLEKEAI-QGGRFMPGEALFRIADLSKVWII-ADVYEQDLARVQPGQRAQVTLEAY 286

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                  F+A +  + P +     +        V L++ +         LR G  A+V  
Sbjct: 287 PGR---SFEARVGYLYPTLDAATRST------RVRLELDNAQGL-----LRPGMFAQVSL 332

Query: 416 TAKN---TTL 422
            A +    T+
Sbjct: 333 AAGDASPRTV 342



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 49/134 (36%), Gaps = 9/134 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQV-ENGSQILQGTPLLTFEDIETTDLID 97
           ++ +V +SG I  ++    + +P F G I++  V   G  + +G PL T           
Sbjct: 117 VDSAVRASGRIEIDERTQVVVAPRFEGWIERLHVNAVGDPVKKGQPLFT-------AYSP 169

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + + + LR      + +        +   +  E+   +L +      +   +VF+  +
Sbjct: 170 ELQSTGEELRIAERLARQSATEDPVASESARRLAEATRARLRNLEVAGQAGARQVFHAPV 229

Query: 158 SSVYRSLKMKLTRM 171
           S V    +      
Sbjct: 230 SGVVLEKEAIQGGR 243


>gi|154244339|ref|YP_001415297.1| RND family efflux transporter MFP subunit [Xanthobacter
           autotrophicus Py2]
 gi|154158424|gb|ABS65640.1| efflux transporter, RND family, MFP subunit [Xanthobacter
           autotrophicus Py2]
          Length = 396

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 59/203 (29%), Gaps = 34/203 (16%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
               E++ +  +A     + +      L   N +S  +L   E    ++  E+       
Sbjct: 125 ITGSESERARAKAGFDRAKIEFERRTTLARTNVISPAELTTAESNFLQAQAEMARADAAI 184

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +                                     + + + +LE      TI SP+ 
Sbjct: 185 ERSKA-----------------------------ELLAQEANVKVLEARLADATITSPLD 215

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G ++  +     +       LM++V       I A+        ++ G  A +RF     
Sbjct: 216 GVVISRERN-PGDLLLPGANLMQVVEL-STIIISARFDESARSSIRPGQAARIRFAS--- 270

Query: 358 IREKKFKAIIEKIDPIISQQDNN 380
              + +   + ++   + Q+   
Sbjct: 271 DPTRVWTGQVLRLSRQVDQETRE 293



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 76/211 (36%), Gaps = 21/211 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIG---LITW------SIL-----LPIEISVSSSGEILNED 54
           ++ ++ A  +R+T+   + ++    L  W      +        P+ + ++  G +    
Sbjct: 11  VETDYSAGWRRLTIALAVAVVAGLLLGYWYVVPRTAAWHQVQPRPMSLEINGPGLLDAI- 69

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           N V + S   G +K  +V+    + +G  L   E ++  + +   +         I   +
Sbjct: 70  NRVVVTSRIQGFLKSIEVDKNDVVKKGEVLARLESVDLQNQLAAAQAQASAAALGITGSE 129

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           S        +D  +  FE R       L + +           S+  ++         +I
Sbjct: 130 SERARAKAGFDRAKIEFERRTT-----LARTNVISPAELTTAESNFLQAQAEMARADAAI 184

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             ++ +L  + + ++ +L +   D T+   L
Sbjct: 185 ERSKAELLAQEANVK-VLEARLADATITSPL 214


>gi|219849314|ref|YP_002463747.1| RND family efflux transporter MFP subunit [Chloroflexus aggregans
           DSM 9485]
 gi|219543573|gb|ACL25311.1| efflux transporter, RND family, MFP subunit [Chloroflexus aggregans
           DSM 9485]
          Length = 586

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/333 (12%), Positives = 96/333 (28%), Gaps = 34/333 (10%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTE-KSALDFLNNKYDVLEKAFESREEQLLDF------L 142
            +    ++ ++  +   +       ++  + + N       A+ + E    +        
Sbjct: 201 TQAKAELERQRELLSAAKAEAQARVEAQANVVRNAQSAYSDAYWNWEHVKANGTDPRTGR 260

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                   +       +       +    +S    +  ++N+ S L A  +        +
Sbjct: 261 SLNDIEQREYQRAFERAERALADAEAALAQSQIAYQTAVQNEMSGLAAAEARVASAQADL 320

Query: 203 KNLF-----EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             L      +  A ++  L + E  + + T   R+      N +       + A    A 
Sbjct: 321 DALLSGPTTDAVASARAQLARAEAELARLTGAARQ------NTIAAQQAQLEAAQARLAQ 374

Query: 258 YLKEISR-DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              +    D+ + +   A   ++L       ++ T+ +P AG I      +         
Sbjct: 375 LSADPRASDVARAEARLAQAQAQLEAARIRLDEATLRAPFAGVIAAVNV-TPGETVGSQA 433

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           P++ I        ++  V    I  V  G    +            F   +  ++P+   
Sbjct: 434 PIVLI--DVSRYLVKVTVDEVDIARVAIGQPVEITVDALNA---PPFTGEVVNVEPL--- 485

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                     Y V L     AF+ +   +R G 
Sbjct: 486 -PTGTNGVTAYRVTL-----AFNPSGQPVRPGM 512



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 60/176 (34%), Gaps = 5/176 (2%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +V+++G +   +    +     G +++  V  G  +  G PLL  +D +    +   + +
Sbjct: 63  TVNATGSVEP-NQTATLSVSIPGRVQEVLVTVGQTVAAGDPLLRLDDRQLRADVAAAEAA 121

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   +  +   +             E        Q      + + T + +     + V  
Sbjct: 122 VALAQADVQALRERA----TPEQRAEAEALVVAAQATLAQTQTNVTPADIAAARAAVVEA 177

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
             +++          R+  E   +  +A L   ++ L+  K   +    +Q ++ +
Sbjct: 178 QERLQKLLAGPTNEQRVRAETALTQAKAELERQRELLSAAKAEAQARVEAQANVVR 233


>gi|258622625|ref|ZP_05717646.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258585081|gb|EEW09809.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 344

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 101/299 (33%), Gaps = 27/299 (9%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           + +K  V++   E     L   +G+  +    +F     ++   L      +  + +N+ 
Sbjct: 66  VTSKPVVIKATQEGIVGPLNLVIGQSVTEQQALFEIDNDALSGELDFIRQEIAQLNVNQE 125

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFE----KNAVSQNDLNQQERIVYKSTLELRENIH 235
           +  +  +L       +   +  ++  +E    K  VS  D      + Y +  EL     
Sbjct: 126 ESFDYHTLTIENAQKNADQIQQIRKRYEFYKAKGQVSDVDYAAIINLAYSAQNELNSRHI 185

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
              +   +  E             + ++  + Q +R+    M +L + +   +Q  + SP
Sbjct: 186 ALDDAQNNYQE-------------RRLAGPISQARRSL---MKELAVKQTQLDQLNVRSP 229

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G +V           ++  PL+ I  +     + A + PK +   + G  A V FP  
Sbjct: 230 YDGRVVDIPVL-EGQQVEKGDPLVMIAKNVTP-QVTAYLNPKYLNVAQFGTHAKVTFPD- 286

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYY-EVILKITDLAFSDNNIELRNGFPAEV 413
                      +E +  +  Q     + +  Y EV L   +       IE   G   EV
Sbjct: 287 GKSFSATVSEAVEIVSKLPVQLSKPFEGKPAYMEVTLTFDEELEKSRWIE---GMTVEV 342



 Score = 43.5 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 72/218 (33%), Gaps = 14/218 (6%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
             M+   KR        + L  +I  ++ +  +     + +   +    +     V IK+
Sbjct: 20  KVMYGQAKRGGYRLRWYLILALVISPLLAMGYYLYRDKVLVIAPA----IVTSKPVVIKA 75

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              GI+    +  G  + +   L   ++   +  +D  +  I  L  + +          
Sbjct: 76  TQEGIVGPLNLVIGQSVTEQQALFEIDNDALSGELDFIRQEIAQLNVNQEESFDYHTL-- 133

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
               +      + + Q +    +++    +V +   +++          + S ++   D 
Sbjct: 134 ---TIENAQKNADQIQQIRKRYEFYKAKGQVSDVDYAAIINLAYSAQNELNSRHIALDDA 190

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +N     R      Q   ++MK L    AV Q  L+Q 
Sbjct: 191 QNNYQERRLAGPISQARRSLMKEL----AVKQTQLDQL 224


>gi|167624088|ref|YP_001674382.1| secretion protein HlyD family protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167354110|gb|ABZ76723.1| secretion protein HlyD family protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 347

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 86/278 (30%), Gaps = 35/278 (12%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S  F   +     + +M L    +     L          A LS  Q      K+L +K 
Sbjct: 85  SAPFQAKLDEARAAYEMALQNNAATDDAILAASANVKSAVAQLSDAQVTYKRTKDLVDKE 144

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + +  L+     +  +   +         +++      + A                  
Sbjct: 145 LLPEQQLDDTRAKLSAAEQSVIAARATMAQLIKSQGAHGNAA------------------ 186

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                   + L+    +     I +P  G +    + +  +     Q ++ +V      +
Sbjct: 187 -PEVKKAAAALSQASLSLSYTNIFAPKDGHLGKLSAHA-GSVVSPGQAIVPLV-VDNTYW 243

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----------SQQDN 379
           ++A     Q++ +  G TAT+    Y  +        IE I P            +   N
Sbjct: 244 VQANFKETQLERLTAGQTATITLDLYPKVDY---HGTIEAISPASGASFTLLPPENATGN 300

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            ++  + + V++++T+ +    +  LR G  A V    
Sbjct: 301 WVKVPQRFPVLVRLTNESEHP-DFPLRVGASANVSIDT 337



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-NLRCHIDTE 113
           N++ I    SG +      +  ++ QG  L+  +       +D  + + +  L+ +  T+
Sbjct: 51  NIIYIAPQVSGKVSSVNASDYQKVSQGDLLVQIDSAPFQAKLDEARAAYEMALQNNAATD 110

Query: 114 KSALDFLNNKYDVLEKAFESRE--EQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLT 169
            + L    N    + +  +++   ++  D + K      ++ +    +S+  +S+     
Sbjct: 111 DAILAASANVKSAVAQLSDAQVTYKRTKDLVDKELLPEQQLDDTRAKLSAAEQSVIAARA 170

Query: 170 RMRSIYLNR 178
            M  +  ++
Sbjct: 171 TMAQLIKSQ 179


>gi|152993096|ref|YP_001358817.1| acriflavin resistance AcrA/AcrE family protein [Sulfurovum sp.
           NBC37-1]
 gi|151424957|dbj|BAF72460.1| acriflavin resistance protein, AcrA/AcrE family [Sulfurovum sp.
           NBC37-1]
          Length = 281

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 74/215 (34%), Gaps = 28/215 (13%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++ D+ +++  +     E+  +++  K      N+     N       ++++ +L     
Sbjct: 69  AEFDILKEQANLALEQAEILTDVYRSKLDEIRRNKALLSRNKNSTFNFEDMNENLSITAE 128

Query: 272 TFADEMSKLTILEKTREQK-----------TILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
             +  +  +  + K+  QK            + +P  G IV        +      P+M 
Sbjct: 129 HTSSMLKAMKAIVKSASQKAKEVSIISHYLEVKAPSNGIIVQKNLH-VGDMVMPGFPVMV 187

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +V       I A+V+   +  + KG       P        + K+I+   +P+       
Sbjct: 188 LVDLDHP-EIEAQVSESDLLKINKGDFVKFTIPSIRYHGRGRIKSIVPSANPMTHT---- 242

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                 + + +K     F  ++ ++  G  A++  
Sbjct: 243 ------FTIRIK-----FKKDSEKIYPGMYAKIEI 266



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 33/79 (41%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +  DN   I + + G +K+  V  G ++ +   L   +  E   L +   ++++      
Sbjct: 30  IVSDNQKYIGARYMGYVKEVFVNIGDRVKREDDLFKMDSAEFDILKEQANLALEQAEILT 89

Query: 111 DTEKSALDFLNNKYDVLEK 129
           D  +S LD +     +L +
Sbjct: 90  DVYRSKLDEIRRNKALLSR 108


>gi|330963297|gb|EGH63557.1| HlyD family secretion protein [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 360

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/370 (11%), Positives = 107/370 (28%), Gaps = 86/370 (23%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI----TWSI---LLPIEISVSSSGEILNEDNVVEIKSP 62
            R+    +    +   +   G++     W       PIE + ++      +     I   
Sbjct: 31  PRSTRKRVVSSVIFGAVAFAGVLLVLYAWQFPPFASPIESTENAQ----VKGQTTLIGPQ 86

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG + +  V++   +  G  L+  +D        + +  +      +  +K++L     
Sbjct: 87  LSGYVHEVPVQDFQFVKAGDLLVRLDD-------RIYRQRLDQAVAQLAVQKASLANNLQ 139

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +    E     R+ +L + + +   + +                                
Sbjct: 140 QRRSAEATIGQRQAELQNSIAQSRKSAA-------------------------------- 167

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                          DL   + L    +VS+++L+  +    ++   + E          
Sbjct: 168 ---------------DLRRNQALVTDGSVSKSELDVTQAADAQANAAVAEAKAVLLIARE 212

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +  +           +   S +        A E++++       +   I++P  G +  
Sbjct: 213 DLQTVI----------VNRGSLEASVANAQAAIELARI-----DLDNTRIVAPRDGQLGQ 257

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP  +     A +   Q+ +V+ G   +            +
Sbjct: 258 IGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKETQMANVRLGQPVSFTVDALDGR---E 311

Query: 363 FKAIIEKIDP 372
               +++I P
Sbjct: 312 MHGHVQRISP 321


>gi|320164484|gb|EFW41383.1| Ser-Thr protein kinase PK428 [Capsaspora owczarzaki ATCC 30864]
          Length = 1729

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 80/231 (34%), Gaps = 21/231 (9%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES-REEQ 137
                L      E  DL      S ++L   +   +     +  + + +E+  ++ R+++
Sbjct: 703 SADEELARL-QTERDDLRKKLAESTQSLTDQLAAAQQEARDVQAELEQVEQELDAERKKE 761

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                 +   +     +  ++ +               L    LE +   +R L +  ++
Sbjct: 762 KQKDRARRGLSTISSADALVAQLSACRTQLQDARDEHDLTIQQLEAEQQTVRKLRAELEE 821

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEAN---- 252
                  L  +  VSQ +L QQ+    KS+ E     I E +  LR + +   +A     
Sbjct: 822 L-----RLENQRLVSQTELLQQQLTDTKSSRETATSQITESETRLRALEKQASDAQEELS 876

Query: 253 ---------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                     E A    + +++   +QR+  D+ S L +     E++   +
Sbjct: 877 RVSAERDRLAERAEAQSQAAKESRNSQRSAQDQASALRVELSQAEEERKRA 927



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 2/142 (1%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +D  G      S+     I  V +        +  I  +R     +   LR  L   +++
Sbjct: 459 VDGTGSPVKDVSEAVANKIREVSQQNAALRAELDKIKNDRSFATFELETLRKTLERTKQE 518

Query: 199 LTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
               +  L E  AV+ +  +   R V    LEL E   + +  L            + A 
Sbjct: 519 AEENEARLEEAAAVASSQRDSLRRQVENLQLELEEK-ADSERSLADAETRLHSETKQRAE 577

Query: 258 YLKEISRDLEQNQRTFADEMSK 279
             +++     +++R   +  S+
Sbjct: 578 LQQQVEELQLESERLRLEATSR 599



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 59/196 (30%), Gaps = 9/196 (4%)

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
               L+  +D  ++ L   N        A E  +   ++          K     +    
Sbjct: 623 RANELQSQLDASQADLKASNALVAERTAAVEHAKASAVEA----EDARKKAEQLALHRQE 678

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                +   + S        + ++S    L     +   + K L E      + L   ++
Sbjct: 679 ALAAAEAQALTSTSELDKAKQRQTSADEELARLQTERDDLRKKLAESTQSLTDQLAAAQQ 738

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEAN--LEFANYLKEISRDLEQNQRTFADEMSK 279
                  EL + + ++ +  R   +  D A   L   +    +   L   +    D   +
Sbjct: 739 EARDVQAELEQ-VEQELDAERKKEKQKDRARRGLSTISSADALVAQLSACRTQLQDARDE 797

Query: 280 --LTILEKTREQKTIL 293
             LTI +   EQ+T+ 
Sbjct: 798 HDLTIQQLEAEQQTVR 813



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 52/147 (35%), Gaps = 15/147 (10%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
              + +   L         +     +  +++L+  +          +   +  E+      
Sbjct: 981  DLVSKIDSLTREIATAAKEQ-TKAQSDLEHLKARL----------SEDKEAFEREKADLT 1029

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +QL+    + + T ++        + R L+ ++T M+S     + + ++   L A  +  
Sbjct: 1030 QQLVAKQRQVNQTEARQDRQNKEDMRR-LQQQITEMKSQLEKEIVIRHQ---LEASQAKV 1085

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERI 222
            Q++L       ++     +DL   +R 
Sbjct: 1086 QRELDDTTYKLKETQAKWSDLLSIQRQ 1112


>gi|261381345|ref|ZP_05985918.1| multidrug resistance protein A [Neisseria subflava NJ9703]
 gi|284795705|gb|EFC51052.1| multidrug resistance protein A [Neisseria subflava NJ9703]
          Length = 396

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 84/273 (30%), Gaps = 31/273 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F          L   + + +         + +  L +A L+  Q DL   ++L    AVS
Sbjct: 102 FQLAYDRAQNELIQAIRQNKQQTAVNSKAKAQVLLRKADLARAQADLRRRESLAGTEAVS 161

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +L+     V ++   L+    E+ +    +                         Q  
Sbjct: 162 GEELSHARAAVVQAQAALKAVEAEEVSAQAALGSNIPLRQ-----------------QPA 204

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +S +       ++  I SPI+G I             Q  P+M +VP S+  ++ A
Sbjct: 205 VQTAISHIKDAWLNLQRTQIRSPISGQIAKRNV-QVGQRIVQGTPMMAVVPLSE-LWVDA 262

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQ 384
                Q++ +K G    +    Y       +   +  +          + +Q       +
Sbjct: 263 NFKESQLRKMKIGQPVEMTADLYGSKV--VYHGKVMGLSAGTGSAFSLLPAQNATGNWIK 320

Query: 385 EYYEVILKITDLAFSDNNIELRNG--FPAEVLF 415
               V ++I+  A       LR G     +V  
Sbjct: 321 VVQRVPVRISLDAKELQQNPLRVGLSMTVKVDI 353



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/186 (11%), Positives = 69/186 (37%), Gaps = 11/186 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET-----TDLIDLKKVSIKNL 106
              ++V I    +G ++K   ++   + +G  L+  +D +          +L +   +N 
Sbjct: 62  VAGHLVMITPQVNGTVRKVMYDDTDVVKKGDVLVALDDSDFQLAYDRAQNELIQAIRQNK 121

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLL---DFLGKYHSTCSKVFNYGISSVYRS 163
           +      K+    L  K D+     + R  + L   + +     + ++       +  ++
Sbjct: 122 QQTAVNSKAKAQVLLRKADLARAQADLRRRESLAGTEAVSGEELSHARAAVVQAQAALKA 181

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQE 220
           ++ +    ++   + + L  + ++  A+       L + +          +++ ++   +
Sbjct: 182 VEAEEVSAQAALGSNIPLRQQPAVQTAISHIKDAWLNLQRTQIRSPISGQIAKRNVQVGQ 241

Query: 221 RIVYKS 226
           RIV  +
Sbjct: 242 RIVQGT 247


>gi|220917477|ref|YP_002492781.1| secretion protein HlyD family protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955331|gb|ACL65715.1| secretion protein HlyD family protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 348

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 70/225 (31%), Gaps = 24/225 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ-- 268
           V++  + + E    K+ L+LR    E K       E YD   +  A        +  Q  
Sbjct: 131 VARAGVTRAEAESEKAALDLRRA-EELKAGDAIAAERYDATRIAGATARAGAGANRAQYA 189

Query: 269 --------NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                    +       + + +    R    + +P +G +    +       Q  Q L +
Sbjct: 190 AALASGELARARVKAAQAAVDLARLQRSYTEVRAPASGRVSRLAAR-VGQIVQPGQSLGQ 248

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ--- 377
           +VP    TY+ A     Q   ++ G    V    Y           +E I      +   
Sbjct: 249 LVP--DRTYVIANFKETQTGEIRPGQPVDVEIDAYGGRT---LHGKVESISGGTGARFAL 303

Query: 378 -DNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTAK 418
              +  +  + +V+ ++           ++ LR G  A V    +
Sbjct: 304 LPPDNASGNFVKVVERVPVRIAWDAVPADLPLRAGLSAFVTVHTR 348



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/219 (11%), Positives = 65/219 (29%), Gaps = 10/219 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E +VV I    +G + +  V + +Q+ QG PL+  +  +    + +++   +       
Sbjct: 64  VEADVVAIAPRVAGPVAEVLVADNAQVRQGQPLVRVDPADY--EVRVRQAEAELATAQAQ 121

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              +       +  V     ES +  L     +       +      +   +        
Sbjct: 122 AAAAEAQVSVARAGVTRAEAESEKAALDLRRAEELKAGDAIAAERYDATRIAGATARAGA 181

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +             L RA + + Q  + + +         Q    +           L 
Sbjct: 182 GANRAQYAAALASGELARARVKAAQAAVDLARL--------QRSYTEVRAPASGRVSRLA 233

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             + +     + + +L  +     AN+ +  + ++   Q
Sbjct: 234 ARVGQIVQPGQSLGQLVPDRTYVIANFKETQTGEIRPGQ 272


>gi|148657738|ref|YP_001277943.1| secretion protein HlyD family protein [Roseiflexus sp. RS-1]
 gi|148569848|gb|ABQ91993.1| secretion protein HlyD family protein [Roseiflexus sp. RS-1]
          Length = 503

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/250 (11%), Positives = 81/250 (32%), Gaps = 8/250 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           + ++G +    +V +++    GI++   V  G  +  G P+L  +  +        +  +
Sbjct: 55  IVANGIVAPATHV-DLRFETGGIVRDVLVREGDVVQAGDPILRLDTSDLELRCAQVRAQL 113

Query: 104 KNLRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +   +      +  D    +  +       RE           +  +++    ++  
Sbjct: 114 SAAQAQYELLAGPVAPADIQRAQAVLARARAHLREVSGAVTPTARRAAQARLEAARVALA 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQ 219
                     +R++   R +L    + LRA       + T ++   E+ A V ++   + 
Sbjct: 174 RLEEGPNPADVRAL---RAELRQAEAELRATHDRLSLEKTTLRLQMEQAANVLRDRQTEY 230

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            RI  ++         +Q+          + A              L+  +   A   ++
Sbjct: 231 ARIRDENQARTEPLTADQRVREASARLAMENAEKALEQARVAYEAALQAERTGIAAAEAR 290

Query: 280 LTILEKTREQ 289
           +  ++   ++
Sbjct: 291 VEAVKARLDR 300



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/349 (12%), Positives = 100/349 (28%), Gaps = 30/349 (8%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF----LNNKYDVLEKAFESREEQLL 139
           L   E+      +   +  ++     +      L      L  + +        R+ +  
Sbjct: 172 LARLEEGPNPADVRALRAELRQAEAELRATHDRLSLEKTTLRLQMEQAANVLRDRQTEYA 231

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               +  +    +          +        +++   R+  E      R  +++ +  +
Sbjct: 232 RIRDENQARTEPLTADQRVREASARLAMENAEKALEQARVAYEAALQAERTGIAAAEARV 291

Query: 200 TMMKNLFEKNAVSQNDLNQQ---------ERIVYKSTLELRENIHEQKNMLRHINELYDE 250
             +K   ++     +              E  + +   E R  + E   M   I E   E
Sbjct: 292 EAVKARLDRILAGADADQIAAARAAVAQAEDDLARLQDERRAALVEIARMEVAIAEAELE 351

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
             L  A        +    +    +  + L   E   E+ T+ +PI G +          
Sbjct: 352 RLLAGAR-----PAEAAIARARVEEARAALQQAELALERATLRAPITGVVAALNIR-PGE 405

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
            A       ++            ++   +  +++G  A +R     D+   +    +  I
Sbjct: 406 VADPHLVAARLADVRGWRIETTNLSELNVTRLREGDPAIIRLNAIPDL---EIPGRVTSI 462

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            P+ + Q+ ++     Y VI+    L     +  LR    A V  T   
Sbjct: 463 KPLGAGQEGDVTL---YTVIITPDRL-----DERLRWNMTAMVQITPGR 503


>gi|325267074|ref|ZP_08133743.1| multidrug efflux MFS membrane fusion protein [Kingella
           denitrificans ATCC 33394]
 gi|324981427|gb|EGC17070.1| multidrug efflux MFS membrane fusion protein [Kingella
           denitrificans ATCC 33394]
          Length = 454

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/371 (12%), Positives = 107/371 (28%), Gaps = 79/371 (21%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIG----LITWSILLPIEISVSSSGEILNEDNVVEIKS 61
            +  +RN    L    + + IGI        TW      E +           ++V+I +
Sbjct: 65  TRTPRRNKTPLLVLTLIFAAIGIYWGVKHFGTWQYQESSENA-------YVNGHLVQISA 117

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G + +  V++   +  G  L   +D      ++  +  +                  
Sbjct: 118 QIPGRVSQILVDDNDTVQAGQVLAVLDDNNAVLALEKARSQL------------------ 159

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                          Q +    + HS+ +       + +    + ++   ++    +   
Sbjct: 160 --------------IQAVRQNARLHSSVNAAQAQSAAQLADVKRAQVAVQKAEADWK--- 202

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
             +   LR + +   ++    KN  +         N +  +             EQ    
Sbjct: 203 --RREALRGVDAVSAEEAAHAKNALD---------NARATLQAAQAAARSAKAQEQAQRD 251

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
              N +  E   +      +        +R                    I++P++G + 
Sbjct: 252 AVGNAVPLEQQPDVLAAASQFKEAWLAVRR------------------TQIVAPVSGQVA 293

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +S           PLM IVP     ++       Q+ ++K G +  +    Y D    
Sbjct: 294 K-RSVQLGQQIGAGAPLMAIVPM-TELWVDVNFKETQLANIKVGQSVDLVSDFYGDDV-- 349

Query: 362 KFKAIIEKIDP 372
           KFK +++ +  
Sbjct: 350 KFKGVVQGLSA 360


>gi|261391845|emb|CAX49304.1| multidrug resistance protein A [Neisseria meningitidis 8013]
          Length = 384

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 103 NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 162

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 163 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 205

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 206 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 263

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 264 MKIGQPAEL 272



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 54  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 113

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 114 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 173

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 174 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRT 214


>gi|21242278|ref|NP_641860.1| RND efflux membrane fusion protein [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|21107705|gb|AAM36396.1| RND efflux membrane fusion protein [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 354

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 54/175 (30%), Gaps = 12/175 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             L  +          ++++       +    +L  E      +Y       + +     
Sbjct: 98  TRLASERAQAQAEIAAIQQSRAVASIDVARSRQLLAEGLAGRRDYEL-TQIKVAEADAKL 156

Query: 274 ADEMSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           A+  +KLT ++    +++   + +P  G +    + S S        L  I P      +
Sbjct: 157 AESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAV 216

Query: 331 RAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQ 377
              +  + +  ++ G            ++F  +  +    F   +  IDP  +  
Sbjct: 217 ELYIDGRDVPLIRPGRPVRLEFEGWPAIQFSGWPSVAHGMFDGRVRAIDPNAAPD 271



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 51/163 (31%), Gaps = 15/163 (9%)

Query: 42  ISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            + S  G+++     D    + +   G ++++ V +G  + +G P+    D++       
Sbjct: 41  QTASGKGQVVSLDPSDRQQPVTAFVPGRVERWYVHDGQHVAKGDPIARVGDLDP------ 94

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                 +L   + +E++                     +    L +  +         I 
Sbjct: 95  ------DLLTRLASERAQAQAEIAAIQQSRAVASIDVARSRQLLAEGLAGRRDYELTQIK 148

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                 K+  +R +   ++       + L+RA      + L  
Sbjct: 149 VAEADAKLAESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNA 191


>gi|313677600|ref|YP_004055596.1| efflux transporter, rnd family, mfp subunit [Marivirga tractuosa
           DSM 4126]
 gi|312944298|gb|ADR23488.1| efflux transporter, RND family, MFP subunit [Marivirga tractuosa
           DSM 4126]
          Length = 353

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 74/231 (32%), Gaps = 35/231 (15%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E N   Q    +  + V    + +R N  E +  L+     +++A LEF N L    +
Sbjct: 70  LAETNGTIQQAHIKSGQKVSAGEVLVRLNPEEAQLQLQSAEIKFEKAKLEFENSLIGFPK 129

Query: 265 DLEQNQRT-------------FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            + Q                   +   +L   + + ++  I +P +GT+   Q+F     
Sbjct: 130 LIAQENPEQDSLYQKLKIGSGLQESSIQLKEAQLSLQKTVIRAPFSGTLYDVQAF-KGKS 188

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +    L      +    +   +   +  ++K+G  A +R P   +     F   +  I+
Sbjct: 189 VKAGDELF--AEFNHRLLVEVNLLESEALNLKEGMPAAIRNPAMDES----FTGEVYSIN 242

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA--KNT 420
           P + +            V  +I           L  G   EV         
Sbjct: 243 PKVDENG---------LVQTQI----LLKGEHALWPGMNVEVEIRIPKGER 280



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 66/175 (37%), Gaps = 17/175 (9%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           SSG++    +V  I +  +G I++  +++G ++  G  L+     E    + L+   IK 
Sbjct: 57  SSGKVKAHKDV-TILAETNGTIQQAHIKSGQKVSAGEVLVRLNPEE--AQLQLQSAEIKF 113

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +  ++ E S + F             ++E    D L +     S +    I      L 
Sbjct: 114 EKAKLEFENSLIGFPK---------LIAQENPEQDSLYQKLKIGSGLQESSIQLKEAQLS 164

Query: 166 MKLTRMRS-----IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           ++ T +R+     +Y  +            L +     L +  NL E  A++  +
Sbjct: 165 LQKTVIRAPFSGTLYDVQAFKGKSVKAGDELFAEFNHRLLVEVNLLESEALNLKE 219


>gi|315224357|ref|ZP_07866191.1| HlyD family secretion protein [Capnocytophaga ochracea F0287]
 gi|314945747|gb|EFS97762.1| HlyD family secretion protein [Capnocytophaga ochracea F0287]
          Length = 310

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 96/268 (35%), Gaps = 32/268 (11%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +       V  ++     + ++       + ++  + RA L+  +++L   +NL    A 
Sbjct: 67  LLKIQKEQVEATIASLKEKTQNPADQVALIRSQLEVQRAQLAQQERELMRTQNLVRGGAA 126

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q  L+                      ++  + +       +    L  I+        
Sbjct: 127 TQKQLDDL------------------SALIDQLRKQIAVTENQLKVSLTNINTQNRNVLS 168

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             A        +++   Q  I++PIAGT++ N +          +PL KI  ++ +  ++
Sbjct: 169 QEAPLQKSAEAVQEQINQGEIINPIAGTVLTNYAL-KGEMQTFGKPLYKIA-NTDVLTLK 226

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----Y 386
           A +T  Q+  +K G   TVR         + ++  I  I          +QT+       
Sbjct: 227 AYITGDQLSQIKLGQQVTVRTDA-GKGAYRTYQGEIIWISQKSEFTPKTIQTKSERANLV 285

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVL 414
           Y + +K+ + +F      L+ G   EVL
Sbjct: 286 YAIKIKVKNDSF------LKIGMYGEVL 307



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/168 (10%), Positives = 63/168 (37%), Gaps = 4/168 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           +SG    ++  V + +  +G +  + VE G  + +G  +            +  + +I +
Sbjct: 24  ASGNFEADE--VIVSAQQTGQLIDYDVEEGKTLTEGQKVGQINVALLKIQKEQVEATIAS 81

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS-KVFNYGISSVYRSL 164
           L+         +  + ++ +V       +E +L+          + +     +S++   L
Sbjct: 82  LKEKTQNPADQVALIRSQLEVQRAQLAQQERELMRTQNLVRGGAATQKQLDDLSALIDQL 141

Query: 165 KMKLT-RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           + ++      + ++  ++  ++  + +  +  QK    ++    +  +
Sbjct: 142 RKQIAVTENQLKVSLTNINTQNRNVLSQEAPLQKSAEAVQEQINQGEI 189


>gi|289663034|ref|ZP_06484615.1| membrane fusion protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289670119|ref|ZP_06491194.1| membrane fusion protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 361

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/175 (11%), Positives = 54/175 (30%), Gaps = 12/175 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             L  +          ++++       +    +L  E      ++       + +     
Sbjct: 105 TRLASERAQAQAEIAAIQQSRAVASIDMARSKQLLAEGLAGRRDFEL-TQIKVAEADAKL 163

Query: 274 ADEMSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           A+  +KLT ++    +++   + +P  G +    + S S        L  I P      +
Sbjct: 164 AESRAKLTRIDIQLNRQSAQLVRAPRDGRVQQLNAASGSAMVSPGTVLAVIAPERVERAV 223

Query: 331 RAKVTPKQIQHVKKGYTAT--------VRFPHYADIREKKFKAIIEKIDPIISQQ 377
              +  + +  ++ G            ++F  +  +    F   +  IDP  +  
Sbjct: 224 ELYIDGRDVPLIRPGRPVRLEFEGWPAIQFSGWPSVAHGMFDGRVRAIDPNAAPD 278



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 71/187 (37%), Gaps = 13/187 (6%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKF 70
           P+  K +  + +IG+  +       P   + S  G+++     D   ++ +   G ++++
Sbjct: 20  PSIAKALAWMLLIGVAIVGAILAFAPWVQTASGKGQVVSLDPGDRQQQVTAFVPGRVERW 79

Query: 71  QVENGSQILQGTPLLT---FEDIETTDLIDLKKVSIKNL------RCHIDTEKSALDFLN 121
            V +G  + +G P+      +    T L   +  +   +      R     + +    L 
Sbjct: 80  YVHDGQHVAKGDPIARVGDLDPDLLTRLASERAQAQAEIAAIQQSRAVASIDMARSKQLL 139

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +     + FE  + ++ +   K   + +K+    I  + R     +   R   + +L+ 
Sbjct: 140 AEGLAGRRDFELTQIKVAEADAKLAESRAKLTRIDI-QLNRQSAQLVRAPRDGRVQQLNA 198

Query: 182 ENKSSLL 188
            + S+++
Sbjct: 199 ASGSAMV 205


>gi|298346214|ref|YP_003718901.1| efflux system protein [Mobiluncus curtisii ATCC 43063]
 gi|315654797|ref|ZP_07907702.1| membrane-fusion protein [Mobiluncus curtisii ATCC 51333]
 gi|298236275|gb|ADI67407.1| efflux system protein [Mobiluncus curtisii ATCC 43063]
 gi|315490758|gb|EFU80378.1| membrane-fusion protein [Mobiluncus curtisii ATCC 51333]
          Length = 695

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 91/298 (30%), Gaps = 24/298 (8%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              ++  +            + +A++  + K D+     E    +    L  Y +  +++
Sbjct: 246 NAKMEANRAGAAVADAKTQRDIAAIERDSAKDDLALARKELERIKKDPTLKAYPNKLAEL 305

Query: 153 FN---YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                  I+ +   +  K     +      D  ++ +  +   +   ++L M        
Sbjct: 306 IEATKQRIAELLSEVDAKDQNADATEKAVKDAWSQQAQAKQNANHASENLGM-------- 357

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             ++       R +     +  E + + +  +       D A +  A  +    R L   
Sbjct: 358 --ARRQFRAALRQIDSQIADAGEAVAKAQTGVSDAKVALDSAKIHAAQEVNSNLRALRAA 415

Query: 270 QRTF----ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           Q T     A+  S +  L        + SP+AG +    S ++   A     LM  V   
Sbjct: 416 QATAGSGMAEGQSAIQKLRADISSAHVTSPMAGIV---TSVTAKVGAAPEGSLMT-VEDD 471

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           +   I  ++    +  +  G   T   P   D   K+F   +  I P    Q      
Sbjct: 472 QNMVIETQIKESGVAKLNVGNQVTFTTPATGD---KEFTGTVAFISPAAVDQTAAPSG 526



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 77/235 (32%), Gaps = 17/235 (7%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++   V+ G ++ +G  L   +  E    +  ++  +   R    T+++++D     Y  
Sbjct: 125 VQTLNVKPGDRVSRGQFLAQLDSSEAMSQLSSQQSQLNESRV---TQQNSIDEAAQNYQN 181

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            + A +   + L   +    +   +  N  + +     +MK  +        LD EN   
Sbjct: 182 AKSALD---QGLNQDIRGAQTALHEAQNEYVKASRAYDQMKQEKDNRTLQALLDQENALR 238

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ-------KN 239
                  + + +           A +Q D+   ER   K  L L     E+       K 
Sbjct: 239 SANQEAENAKMEANRAGAAVAD-AKTQRDIAAIERDSAKDDLALARKELERIKKDPTLKA 297

Query: 240 MLRHINELYDEANLEFANYLKEISRD---LEQNQRTFADEMSKLTILEKTREQKT 291
               + EL +      A  L E+       +  ++   D  S+    ++     +
Sbjct: 298 YPNKLAELIEATKQRIAELLSEVDAKDQNADATEKAVKDAWSQQAQAKQNANHAS 352


>gi|118479717|ref|YP_896868.1| multidrug resistance protein A [Bacillus thuringiensis str. Al
           Hakam]
 gi|229186825|ref|ZP_04313980.1| multidrug resistance protein A [Bacillus cereus BGSC 6E1]
 gi|118418942|gb|ABK87361.1| possible multidrug resistance protein A [Bacillus thuringiensis
           str. Al Hakam]
 gi|228596562|gb|EEK54227.1| multidrug resistance protein A [Bacillus cereus BGSC 6E1]
          Length = 225

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ +D  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 65  KLTDWKAEVGKDYNEN-----DKLGAVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 118

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 119 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LSGKVEQVGL 174

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 175 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 224


>gi|325266999|ref|ZP_08133669.1| macrolide-specific efflux protein MacA [Kingella denitrificans ATCC
           33394]
 gi|324981499|gb|EGC17141.1| macrolide-specific efflux protein MacA [Kingella denitrificans ATCC
           33394]
          Length = 420

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 11/142 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V++ +  SG IKK  V+ G ++  G  +   +++   + ++ K
Sbjct: 72  ISQTVSATGEI-AATNLVDVGAQVSGQIKKMHVQIGDEVKAGDLIAEIDNVTQVNEVNTK 130

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYD----------VLEKAFESREEQLLDFLGKYHSTC 149
           K  ++  R  + + + AL     KYD          V ++ FE+ E+ L     K     
Sbjct: 131 KAQLETYRAQLASAQVALKIAQRKYDRYKTLANADAVSKEEFEATEDSLATNRAKIRELQ 190

Query: 150 SKVFNYGISSVYRSLKMKLTRM 171
           S +    I+       +  TR+
Sbjct: 191 SSIKQTQIAINTAEKDLGYTRI 212



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 73/212 (34%), Gaps = 21/212 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q +  + +    +  L++ +  +++   L + + +  E      + L      + + Q 
Sbjct: 132 AQLETYRAQLASAQVALKIAQRKYDRYKTLANADAVSKEEFEATEDSLATNRAKIRELQS 191

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLT 328
           +       +   EK      I +P+ GT+V             SQ    +++I       
Sbjct: 192 SIKQTQIAINTAEKDLGYTRITAPVDGTVVAL-VVEQGQTINASQTSPTVVQIANLGS-M 249

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNN 380
             + ++    I  V+ G    + F   ++       A ++ IDP +        S+  + 
Sbjct: 250 TNKMQIAEGDITKVRAGQK--ISFTILSEPDNP-ISATLDSIDPGLTTMSKGSYSKSTDT 306

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             +  YY     +      ++N +L  G   +
Sbjct: 307 TSSAIYYFARAIVD-----NSNHKLAIGMTTQ 333


>gi|109898551|ref|YP_661806.1| RND family efflux transporter MFP subunit [Pseudoalteromonas
           atlantica T6c]
 gi|109700832|gb|ABG40752.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           atlantica T6c]
          Length = 407

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 65/196 (33%), Gaps = 18/196 (9%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +       +    ++E +N  +   EL ++  +  + +        +          S+L
Sbjct: 102 QSAQAKYAQASSALNEAENEYQRYKELVEQGLVSKSGFDN-AEAAYKSALSNVEVAKSQL 160

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +  K R+  T+ +P  G I   +    S      Q + + V       +   V    IQ
Sbjct: 161 ELATKDRQDSTLQAPYDGVITK-RMIEPSQQISPGQSVFE-VEGHGGLEVHVSVPESLIQ 218

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            +  G    VRFP   ++   +   +I ++       +    T               + 
Sbjct: 219 QLSNGMIVPVRFPAAPNV---ELTGVITEVGTRAETANAFPITM------------VLNG 263

Query: 401 NNIELRNGFPAEVLFT 416
           ++ +LR G  AEV  T
Sbjct: 264 SSPQLRAGMTAEVDIT 279



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 30/108 (27%), Gaps = 3/108 (2%)

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALD 118
              G +    V  G +I +G  L T +           +         +   + E     
Sbjct: 67  LVGGKVDGVSVNLGQKITKGQVLATLDQRSFNLNYQSAQAKYAQASSALNEAENEYQRYK 126

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            L  +  V +  F++ E      L       S++          +L+ 
Sbjct: 127 ELVEQGLVSKSGFDNAEAAYKSALSNVEVAKSQLELATKDRQDSTLQA 174


>gi|21242198|ref|NP_641780.1| multidrug resistance efflux pump [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21107617|gb|AAM36316.1| multidrug resistance efflux pump [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 397

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 83/268 (30%), Gaps = 28/268 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y      + + S     L S + D    K+L    A+S 
Sbjct: 97  EVALQQAEANLAKTVRQVRGLYRTVEGAQAELSAREVTLRSARSDFARRKDLAATGAISN 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      +  +   +  +    +     +++                      NQ   
Sbjct: 157 EELAHARDELAAAEAAVSGSRESLERNRALVDDSA------------------VANQPDV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L        +  +++P++G +   +S       Q    LM +VP  +  ++ A 
Sbjct: 199 QTAAAQLRQAYLNHARTGVVAPVSGYVAR-RSAQVGQRVQPGSVLMAVVPL-EQVWVEAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----E 385
               Q++H++ G    +    Y        + +++ +            N         +
Sbjct: 257 FKETQLKHMRLGQEVELHSDLYGGGVSYTGRIQSLGLGTGSAFSLLPAQNASGNWIKIVQ 316

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
              V + +     + N + +      +V
Sbjct: 317 RVPVRIAVDSKQLASNPLRIGLSMKVDV 344



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 76/215 (35%), Gaps = 21/215 (9%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSP 62
                  A+L+ + +++I+ IIGL+ W  L+       + +         + N V+I   
Sbjct: 14  AAPSKRRAALRIVAIVAILAIIGLVVWYFLVGRWHEDTDDA-------YVQGNQVQITPM 66

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +     E+G ++ +G  L+  +  +T       +V+++    ++      +  L  
Sbjct: 67  VGGTVVSIGAEDGMRVERGQLLVQLDPADT-------EVALQQAEANLAKTVRQVRGLYR 119

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLD 180
             +  +    +RE  L      +           IS   +  +         ++  +R  
Sbjct: 120 TVEGAQAELSAREVTLRSARSDFARRKDLAATGAISNEELAHARDELAAAEAAVSGSRES 179

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           LE   +L+     ++Q D+        +  ++   
Sbjct: 180 LERNRALVDDSAVANQPDVQTAAAQLRQAYLNHAR 214


>gi|319781073|ref|YP_004140549.1| efflux transporter RND family, MFP subunit [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317166961|gb|ADV10499.1| efflux transporter, RND family, MFP subunit [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 391

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 67/203 (33%), Gaps = 18/203 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V Q D  +   +V     E + ++ +    L    +   +A L            L+  +
Sbjct: 109 VKQGDHVKTGDLVLMLAAEEKISMVDNAKQLVVQRQAELDAALRLMKTGNLPKLQLDTAR 168

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  S+L   +   ++  + +P  G I         +   Q   +  I+        
Sbjct: 169 SNLTSAQSQLETAQAELDRNEVKAPFDGVIDRVPV-ELGSSIMQGGEVATILKLD-PVIA 226

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           R +V+ + + ++K G  AT+R         +  +  +  I    S           + V 
Sbjct: 227 RGEVSERDLGYLKLGDKATIRLVS-----GQTVEGTVRYISRDASSATRT------FRVE 275

Query: 391 LKITDLAFSDNNIELRNGFPAEV 413
           + + +   +D ++    G  AE+
Sbjct: 276 VAVPN---ADGSVP--AGMTAEI 293



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 4/104 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I K  V+ G  +  G  +L     E   ++D  K  +   +  +D     +   N   
Sbjct: 102 GVIDKLPVKQGDHVKTGDLVLMLAAEEKISMVDNAKQLVVQRQAELDAALRLMKTGNLPK 161

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             L+ A       L     +  +  +++    + + +  +  ++
Sbjct: 162 LQLDTA----RSNLTSAQSQLETAQAELDRNEVKAPFDGVIDRV 201


>gi|298373139|ref|ZP_06983129.1| HlyD family secretion protein [Bacteroidetes oral taxon 274 str.
           F0058]
 gi|298276043|gb|EFI17594.1| HlyD family secretion protein [Bacteroidetes oral taxon 274 str.
           F0058]
          Length = 312

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 89/246 (36%), Gaps = 25/246 (10%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +YL +  LE++   L+    +    L+ ++   +     +  L +       +  +L +
Sbjct: 77  QLYLKKRQLESQIRALQGRKPNIAVQLSALQAQLQTAQTERTRLEKLVAGDAATRKQLDD 136

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + + + + IN       +       ++           A    ++  LE    +  +
Sbjct: 137 VNAQIEVLKKQINAQQSSLKISSDGISDDV-----------ATLQVQIEQLEDQLAKHRL 185

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  GT++  +    +      +PL KI    +    RA VT  Q+  +K G    V F
Sbjct: 186 TAPQNGTVLA-KIAKVNELTTVGKPLYKIA-DLQNITFRAFVTSAQLTQLKIGQNVRV-F 242

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRN 407
             + + + +++K  I  I          +QTQ+      Y V + +       N+  L+ 
Sbjct: 243 ADFGEKKRREYKGTISWISDKSEFTPKTIQTQDERANLVYAVKITV------KNDGYLKI 296

Query: 408 GFPAEV 413
           G   EV
Sbjct: 297 GMYGEV 302



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 58/150 (38%), Gaps = 11/150 (7%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           +SG    E     I +  +G+I++F VE G ++ +G  +   +  +        +  I+ 
Sbjct: 34  ASGTFEAEGT--IISAEATGVIRQFDVEEGQELTEGQIIGYIDSTQLYLKKRQLESQIRA 91

Query: 106 LRCH-------IDTEKSALDFLNNKYDVLEK--AFESREEQLLDFLGKYHSTCSKVFNYG 156
           L+         +   ++ L     +   LEK  A ++   + LD +        K  N  
Sbjct: 92  LQGRKPNIAVQLSALQAQLQTAQTERTRLEKLVAGDAATRKQLDDVNAQIEVLKKQINAQ 151

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            SS+  S       + ++ +    LE++ +
Sbjct: 152 QSSLKISSDGISDDVATLQVQIEQLEDQLA 181


>gi|37362206|gb|AAQ91231.1| differentially expressed in FDCP 6-like protein [Danio rerio]
          Length = 628

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 76/214 (35%), Gaps = 8/214 (3%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           L  +  +  +  + ++ + +     +   +   +    + ++L++A    +  L     +
Sbjct: 320 LKLKRRDQREQREKRREAKEQELQRLRALQEERERKMAELELLKEAQRQAQAMLEQDEQR 379

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 ++       +  + + + +    + L   + E + + +R L +  Q+    ++ 
Sbjct: 380 RRQQHEQLHQALEIQLKEAEEARASMQAEMALKEAEAEKQRTRIRELEAMQQRLEDALQQ 439

Query: 205 LFEKN------AVSQNDLNQQERIVYKSTLELRENIHE-QKNMLRHINELYDEANLEFAN 257
             +          +Q  L  +E    K+ + LRE   E  +   R   EL  E   + + 
Sbjct: 440 EIKARQDEEAFRYAQARLLAEEEEKMKALMGLREEQEEYIQRAQREKQELRQEMESK-SR 498

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            L+E  R LE+ +         +   ++   Q +
Sbjct: 499 ALEEAQRQLEETRANRYRVDQDVVAAQRKLRQAS 532



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 10/150 (6%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNL 205
            T  +++  G +S+++ LK+K    R     R +  E +   LRAL    ++ +  ++ L
Sbjct: 303 QTAIRLYVEGKTSLHKDLKLKRRDQREQREKRREAKEQELQRLRALQEERERKMAELELL 362

Query: 206 FEKNAVSQNDL------NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            E    +Q  L       +Q+       LE++    E+            EA  E     
Sbjct: 363 KEAQRQAQAMLEQDEQRRRQQHEQLHQALEIQLKEAEEARASMQAEMALKEAEAEKQRTR 422

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               R+LE  Q+   D + +     +  E 
Sbjct: 423 ---IRELEAMQQRLEDALQQEIKARQDEEA 449



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 42/143 (29%), Gaps = 4/143 (2%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++                T +R     +  L     L R      Q++    +   ++  
Sbjct: 286 ELSASDTKQRQEWTTAIQTAIRLYVEGKTSLHKDLKLKRR----DQREQREKRREAKEQE 341

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + +    Q+ER    + LEL +    Q   +   +E       E  +   EI     +  
Sbjct: 342 LQRLRALQEERERKMAELELLKEAQRQAQAMLEQDEQRRRQQHEQLHQALEIQLKEAEEA 401

Query: 271 RTFADEMSKLTILEKTREQKTIL 293
           R        L   E  +++  I 
Sbjct: 402 RASMQAEMALKEAEAEKQRTRIR 424


>gi|260772900|ref|ZP_05881816.1| macrolide-specific efflux protein MacA [Vibrio metschnikovii CIP
           69.14]
 gi|260612039|gb|EEX37242.1| macrolide-specific efflux protein MacA [Vibrio metschnikovii CIP
           69.14]
          Length = 395

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 81/259 (31%), Gaps = 54/259 (20%)

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           +  +++    +   L  +    +AL+   Q +    K +  +NA SQ +    +  +   
Sbjct: 97  QQNKLKEAQASLNSLNAQYQAKQALIRQAQAEFNRQKAMLAENASSQANYEAAQTSLAVY 156

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             EL++   +Q+     ++                                         
Sbjct: 157 IAELKQLKAQQEQAKISVDS------------------------------------ANLD 180

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKK 344
               TI +P+ GT+VY+           +Q    I+  +      ++A+++   I  V  
Sbjct: 181 LNYTTIRAPMDGTVVYSAV-EEGQTVNANQTTPTIIELAVLDTMTVKAQISEADIIKVTP 239

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-------YYEVILKITDLA 397
           G    + F        K++ + +  I+P  +    N            YY  +  I    
Sbjct: 240 GLP--IYFTILGQPN-KRYSSTLRAIEPGPTLMTGNDSNLSISNDEAIYYHGLFDID--- 293

Query: 398 FSDNNIELRNGFPAEVLFT 416
             + +  LR G  A+V   
Sbjct: 294 --NPDGLLRIGMTAQVTIV 310


>gi|241762306|ref|ZP_04760387.1| secretion protein HlyD family protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|241373209|gb|EER62839.1| secretion protein HlyD family protein [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
          Length = 348

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 80/257 (31%), Gaps = 22/257 (8%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +   I  ++ D E ++    A  +  Q   ++ +   E+ A   +     +++++   + 
Sbjct: 93  QTGQILAHQDDSELRAQRDAAQANFEQAQESLRRAEAEQAAAHASTGLAAQQLMHTKQMV 152

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +  + + +           + + E +        ++   +       +++  L+    +
Sbjct: 153 AQSLVSDMELQNSQTAYTTRKLSEEASQ------HNVAAAKEAVKAASAQIARLDANLAE 206

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYI--RAKVTPKQIQHVKKGY 346
            TI +P +G I   +     +   Q   L  ++ P      +   + V       +  G 
Sbjct: 207 MTIRAPTSGQI-EYRIAEKGSVLGQGGRLASLLDPSDIYLTVFFESAVA----GKLHVGD 261

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDN 401
            A ++     D       A I  + P         +    + +  Y V L+I        
Sbjct: 262 EARIKLDAMNDR---LVPAQISFVSPEAQFTPKFVETKTEREKLVYRVKLRIMPDTVHRL 318

Query: 402 NIELRNGFPAEVLFTAK 418
              L+ G         +
Sbjct: 319 GGVLKAGMTGIGYVRTE 335



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 82/306 (26%), Gaps = 20/306 (6%)

Query: 21  TLLSIIGIIGLITWSIL-------LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
            L+   G  G   W            IE    S+G +  E    ++ + ++G I      
Sbjct: 33  ILVICAGFGGFRLWHYFEHKNDLPPHIEG---SNGRL--EMTRFDVAAKYAGRITDLSFH 87

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L   +D E     D  + + +  +  +   ++     +    +  +    
Sbjct: 88  EGDVVQTGQILAHQDDSELRAQRDAAQANFEQAQESLRRAEAEQAAAHASTGLAAQQLMH 147

Query: 134 REEQLLDFLGKYHSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            ++ +   L       +    +     S   S         ++      +    + L  +
Sbjct: 148 TKQMVAQSLVSDMELQNSQTAYTTRKLSEEASQHNVAAAKEAVKAASAQIARLDANLAEM 207

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                    +   + EK +V    L Q  R+               ++ +     + DEA
Sbjct: 208 TIRAPTSGQIEYRIAEKGSV----LGQGGRLASLLDPSDIYLTVFFESAVAGKLHVGDEA 263

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            ++       +           A    K    +  RE+      +   I+ +        
Sbjct: 264 RIKLDAMNDRLVPAQISFVSPEAQFTPKFVETKTEREKLVYR--VKLRIMPDTVHRLGGV 321

Query: 312 AQQSQP 317
            +    
Sbjct: 322 LKAGMT 327


>gi|229105196|ref|ZP_04235845.1| multidrug resistance protein A [Bacillus cereus Rock3-28]
 gi|228678122|gb|EEL32350.1| multidrug resistance protein A [Bacillus cereus Rock3-28]
          Length = 199

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 61/173 (35%), Gaps = 17/173 (9%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSS 309
           A  +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++
Sbjct: 36  AAGKLTDWKAEVGKNYNEN-----DKLGAVTVAGANGEQTVDVTIPQNATVVQSNA-TTN 89

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            +     P+          ++ A +    +  V+KG    V    Y D         +E+
Sbjct: 90  AFVGAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LSGKVEQ 145

Query: 370 IDPIISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
           +    +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 146 VGLTTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 198


>gi|212709933|ref|ZP_03318061.1| hypothetical protein PROVALCAL_00983 [Providencia alcalifaciens DSM
           30120]
 gi|212687445|gb|EEB46973.1| hypothetical protein PROVALCAL_00983 [Providencia alcalifaciens DSM
           30120]
          Length = 323

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 55/368 (14%), Positives = 105/368 (28%), Gaps = 91/368 (24%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             +   V + S   G + +  VE G  + +G  L+T E  E        K +    +  +
Sbjct: 34  EVDAPEVIVTSKAKGRVMERHVERGDDVKKGQLLITLESPELQAQYAALKAAKDQAQAQL 93

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           D                                       +  N       R L+  L +
Sbjct: 94  D---------------------------------------QSLNGTREETLRDLQAALAQ 114

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             S Y N                   ++ T + NL  K  VS N+L+   +      +  
Sbjct: 115 ANSQYQN-----------------AAREFTRLSNLSGKGYVSANELDTARKA---KEVAF 154

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           ++    +  +    N    E   ++   + +  + L + Q    D               
Sbjct: 155 QQVQSAKARLEEGKNGDRIELRQQYEAAVNQAEQKLAELQVQLDDL-------------- 200

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTAT 349
            + +P+ G +    +           PL+ ++   +  ++      + I   VKKG    
Sbjct: 201 QVKAPVDGEVGPIPA-EIGELFNAGSPLISLISLPQAYFV--YNLREDILVGVKKGDKIE 257

Query: 350 VRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEY----YEVILKITDLAFSDNNI 403
           +  P   D   K  +A +  I P    + +     T ++    +EV L            
Sbjct: 258 LTVPALGD---KTVEAEVRYIAPKGDYATKRATRATGDFDLKTFEVRLYPQQPIEG---- 310

Query: 404 ELRNGFPA 411
            LR G   
Sbjct: 311 -LRPGMSV 317


>gi|322832673|ref|YP_004212700.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
 gi|321167874|gb|ADW73573.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
          Length = 396

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/369 (12%), Positives = 99/369 (26%), Gaps = 79/369 (21%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E + V I    +G +    V++   + +G  L+  +  + T   D  +  +      +  
Sbjct: 92  EGDAVTIAPKIAGYVTHLAVKDNQFVKKGDLLVEIDPRDATAQRDQAQAQLGLAVAQLHQ 151

Query: 113 EKSALDFLNNKYDVLEKAFESRE-EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            ++  D    +Y       ++++     + L        +      ++  +++     ++
Sbjct: 152 AQAQYDLAKVQYPAQLAQAKAQQTRAEANLLNATADFRRQRGVDPRATTQQNIDTSNAQV 211

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           RS      DLEN                                                
Sbjct: 212 RSAA---ADLEN------------------------------------------------ 220

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                Q      +N    E N+E      E ++             ++L           
Sbjct: 221 AKAQVQVAAQVQLNIRQAETNVEARQQQVEQAK-------------AQLETATLNLSYAQ 267

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P  G +            Q    L  +V      +I A     Q++ ++ G    + 
Sbjct: 268 VRAPFDGYVTKRNV-QLGTLVQAGTSLFSVVSKD--IWIAANYKESQLERMRPGNKVEIT 324

Query: 352 FPHYADIREKKFKAIIEKI--------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
              + DI+       ++ I            ++       +    V +KI   +  D N 
Sbjct: 325 VDAFPDIK---LHGHVDSIQQGTGSRFSAFPAENATGNYVKIVQRVPVKIVIDSGLDENH 381

Query: 404 ELRNGFPAE 412
            L  G   E
Sbjct: 382 PLPLGLSVE 390


>gi|302386535|ref|YP_003822357.1| secretion protein HlyD family protein [Clostridium saccharolyticum
           WM1]
 gi|302197163|gb|ADL04734.1| secretion protein HlyD family protein [Clostridium saccharolyticum
           WM1]
          Length = 579

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/419 (11%), Positives = 117/419 (27%), Gaps = 65/419 (15%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           SSG I  + +  +I S   G +   + E G  + +G  L   +       +   K S++ 
Sbjct: 72  SSGTISPK-DTYDITSLVEGEVVAAEFEEGDTVEKGQVLYQIDTSSMESEMTSIKNSLER 130

Query: 106 LRCHIDTEKSALDFLNNKYD----------------VLEKAFESREEQLLDFLGKYHSTC 149
            +   +      +   + Y                 + E    S   ++           
Sbjct: 131 SQESYEIALDDYNTALSNYSGNTYKSTENGYIKSLSIKEGDKVSSNTEIASVYDDKTMKI 190

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
              F  G +S   +    +  +           +  S +   L+  +    +   +    
Sbjct: 191 KIPFLSGEASRMAAGNGAVLTLTDTGEQIRGTVSSVSNMDVTLTGGRIVRYVTIEVTNPG 250

Query: 210 AVS--------------------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            ++                    +  L    +    S +E+   + ++ + +     ++ 
Sbjct: 251 GLTTETAATAMVGDFVCSMEATFEPKLETTMKADVSSGVEVGTLLVQEGDYVTKGTPIFT 310

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                    ++     LE+ + +     SKL   + T +  TI +PI+G +       + 
Sbjct: 311 MERKSAERLIRTYKETLEKAEESLETAKSKLESTQDTYDNYTITAPISGKV----ITKTG 366

Query: 310 NYAQQSQPL---------MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              +    +         + ++           V    ++ V+ G T  +       +  
Sbjct: 367 ---KAGDKISKSTNGSTTLAVIYDMSNYTFEMSVDELDVKSVEVGQTVVI--TA-DAVTG 420

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           K F   +  +    S  +        Y V + + D        EL  G   + +     
Sbjct: 421 KTFTGTVSNVSLQSSTSNGVTN----YPVTVTLND-----GMDELLPGMNVDGVIILDE 470


>gi|289665965|ref|ZP_06487546.1| cation efflux system protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289668920|ref|ZP_06489995.1| cation efflux system protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 371

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 72/197 (36%), Gaps = 29/197 (14%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLE--FANYLKEISRDLEQNQ----------RTFA 274
           + EL     +       + +   E   +   A      +RDL+  Q          R   
Sbjct: 114 SAELASAYSDAGKARATLQQARLELARQKALAADSIAAARDLQTAQQAFDNAQNDARAAG 173

Query: 275 DEMSKLTILEK--TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           D +++L +  +  +  +  + +PIAG +V   +     +   S PLM  V      ++ A
Sbjct: 174 DRLAQLGVAAQATSHRRYVLRAPIAGRVVDLSAAPGGFWNDTSAPLMT-VADISQVWLTA 232

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  ++I  V +G   T     Y   R   F   ++ +D ++      L      +V + 
Sbjct: 233 SVPEREIGQVFEGQPVTASLDAYPGQR---FTGQVQHLDDLLDPTTRTL------KVRV- 282

Query: 393 ITDLAFSDNNIELRNGF 409
               A ++++  L+ G 
Sbjct: 283 ----ALNNHDSLLKPGM 295



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 32/111 (28%), Gaps = 7/111 (6%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +L E  V  +  P +G +       G  +  G  L   +  E               +  
Sbjct: 76  VLPERLVRVV-PPLAGRVVALPKTLGDTVRAGDVLCVLDSAELASAYS------DAGKAR 128

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +++ L+    K    +    +R+ Q            ++     ++ +
Sbjct: 129 ATLQQARLELARQKALAADSIAAARDLQTAQQAFDNAQNDARAAGDRLAQL 179


>gi|148656440|ref|YP_001276645.1| secretion protein HlyD family protein [Roseiflexus sp. RS-1]
 gi|148568550|gb|ABQ90695.1| secretion protein HlyD family protein [Roseiflexus sp. RS-1]
          Length = 533

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/351 (11%), Positives = 97/351 (27%), Gaps = 54/351 (15%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V  G  +  G  L   +  E  D +   +  +   R  +++ + A +    + 
Sbjct: 76  GRVNIVSVSRGDVVKAGDVLAELQQEEALDELRRAEDDLTQARRDLESARLAKEKRIKER 135

Query: 125 DV--------LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           ++        LE+     E  L   L        +           +       +R    
Sbjct: 136 ELGVERARRDLERLLPGGEADLFKELQDRLEAAQRDLRNARDDASWAKTSAEEALRDSAE 195

Query: 177 NRLD---------------------------------------LENKSSLLRALLSSHQK 197
              D                                        E +    R  L+  ++
Sbjct: 196 ALSDTQKAYSVAYWNWDWVQRYGTDPDNPFIKNEAGVLVPNRLTEKQKEEYRDKLTQAER 255

Query: 198 DLTMMKNLFEKNAVSQNDLNQQE----RIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
            L   +   E+   +++     E    R   K   E +  +         + E    A  
Sbjct: 256 ALRDAERNLEQAQRARDRAFDDEVVRVREAEKKVEEAQRAVDTLLQGRNKVIEDAQRALE 315

Query: 254 EFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           +    L+E   + L    R   +    L    +  +   +++P  GT++           
Sbjct: 316 QAQIALEEARSETLNSAIRAVENAERALEKARRRVDDGRVIAPQDGTVLAVAI-EPGVSV 374

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +P+++I          A ++ +Q++ + +G +  +R     D+     
Sbjct: 375 TAFEPVIEIA-DPSNLEFAATLSAQQMRLLSEGQSVEIRLLSRPDLAIPGI 424


>gi|84516477|ref|ZP_01003836.1| hypothetical protein SKA53_07696 [Loktanella vestfoldensis SKA53]
 gi|84509513|gb|EAQ05971.1| hypothetical protein SKA53_07696 [Loktanella vestfoldensis SKA53]
          Length = 359

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 107/329 (32%), Gaps = 37/329 (11%)

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           +++  +     + +  +S L+ L  +   L +  ++   Q  D           V+ Y  
Sbjct: 20  IERDELLFTVANENQNRSFLNELLTERRTLAQRIDAFTVQAEDLQQLMTQLGVNVYQYQR 79

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            +  R           I      LE   +  +A LSS + +L+  + L +       ++ 
Sbjct: 80  FTSDR-----------IEHEIARLEADRAARQAALSSVRSNLSRQQQLNDNGYARDVEVE 128

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYD---------------EANLEFANYLKEI 262
                V     E+     + + +      L                 +   E    L +I
Sbjct: 129 DLTFQVQGLEAEISSIAAQVRVLEADQAGLRAGTFVGIGRNDVPYSMQRADEIRILLADI 188

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +  L +++   A+   ++ I ++   +     + SP+ G +  +  +  +     S+  +
Sbjct: 189 AARLSEDRTRIAEIDREILIEQEQLARTERFEVRSPMPGVLWRSYIYPGAAV--PSENEL 246

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++   +  ++ A V+ + +  V  G   +VR    +   +     +      +   +  
Sbjct: 247 IVIADCETLFVDAAVSNRSVNTVMPGMQVSVRLVGSSMQFDGIVSNVYGGASMLALDRTQ 306

Query: 380 N------LQTQEYYEVILKITDLAFSDNN 402
                    ++    + + I++L     N
Sbjct: 307 AAVLIDVEASEIVARIAIDISELPQLREN 335


>gi|261343441|ref|ZP_05971086.1| HtpX protein [Providencia rustigianii DSM 4541]
 gi|282568587|gb|EFB74122.1| HtpX protein [Providencia rustigianii DSM 4541]
          Length = 329

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 97/300 (32%), Gaps = 34/300 (11%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              DV E A  +  +QL       +            S    L +K +  R+  + ++  
Sbjct: 55  ASLDVDEGAKVTSGQQLGKLDDAPYINALNKAKGVRDSAKAQLALKESGYRTQEIAQV-- 112

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E + +  +A            + L  +  +S NDL+                 + +   L
Sbjct: 113 EAEVAQRQAAWQYADSFFKRQQGLAAQRLISANDLDNAR--------------NNRNQTL 158

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             +    D+ N   + + +E   ++   +  +    + +   E       + +P  GTI+
Sbjct: 159 AALKASQDKLNQYQSGFRQE---EIAAARGEWLQAEAAVAQAELDLADTILTAPSDGTIL 215

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             ++            +  +   +   ++RA V+   +     G    +   +       
Sbjct: 216 T-RAIEPGTIIGAGNTVFSVT-LTNPVWVRAYVSEAHLGDAIPGSKVLL---YTDSQPNT 270

Query: 362 KFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   I  + P       S Q  +L+T   Y + + + D      N +LR G P  + FT
Sbjct: 271 PYHGTIGFVSPTAEFTPKSVQTPDLRTDLVYRLRIIVDDP-----NDKLRQGMPVTIQFT 325



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 42/134 (31%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G+++  G  L   +D    + ++  K    + +  +  ++S        
Sbjct: 51  GGKLASLDVDEGAKVTSGQQLGKLDDAPYINALNKAKGVRDSAKAQLALKESGYRTQEIA 110

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               E A      Q  D   K     +       + +  +   +   + ++  ++  L  
Sbjct: 111 QVEAEVAQRQAAWQYADSFFKRQQGLAAQRLISANDLDNARNNRNQTLAALKASQDKLNQ 170

Query: 184 KSSLLRALLSSHQK 197
             S  R    +  +
Sbjct: 171 YQSGFRQEEIAAAR 184


>gi|157368746|ref|YP_001476735.1| secretion protein HlyD family protein [Serratia proteamaculans 568]
 gi|157320510|gb|ABV39607.1| secretion protein HlyD family protein [Serratia proteamaculans 568]
          Length = 323

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 61/409 (14%), Positives = 127/409 (31%), Gaps = 110/409 (26%)

Query: 17  LKRMTLLSIIGIIGLITWSILLP-------IEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +K+ TL +++ ++  I  +IL         ++  V +  E++             G + +
Sbjct: 1   MKKKTLFTLLLMVVAIAMAILFRAHNQDLLLQGEVDAP-EVIVASKAK-------GRVVE 52

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             VE G  +     ++  +  E    +   + S    +  +D                  
Sbjct: 53  RLVERGDDVKAQQVMIQLDSPELMAQLRSAQASRDEAKAQLD------------------ 94

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                                +  +       R+L+  L +  + Y N            
Sbjct: 95  ---------------------QSLHGTREESIRNLRANLAQAEAQYRN------------ 121

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                 Q D     ++  K  +S+++L+   R    +  +++     + N+    N    
Sbjct: 122 -----AQNDYNRNLSVSGKGYISKSELDSSRRARDTTFQQVQ---AAKANLDEGTNGDRI 173

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E   ++A  L+    +L Q +    D                +L+P+AG +    +    
Sbjct: 174 ELRQQYAAALRAAEENLLQVKAQTDDLR--------------VLAPVAGEVGPIPA-EVG 218

Query: 310 NYAQQSQPLMKI--VPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFPHYADIREKKFKAI 366
                  PL+ +  VP         +   + I  HV+KG    +R P   D   K  +A 
Sbjct: 219 ELLNAGSPLLTLIRVP-DAYFVFNLR---EDILAHVRKGDKVQMRVPALKD---KMIEAE 271

Query: 367 IEKIDP--IISQQDNNLQTQEY----YEVILKITDLAFSDNNIELRNGF 409
           +  I P    + +     T ++    +EV L  +          LR G 
Sbjct: 272 VRYIAPLGDYATKRATRATGDFDLKTFEVRLYPSQPVEG-----LRPGM 315


>gi|163732246|ref|ZP_02139692.1| multidrug resistance efflux pump, putative [Roseobacter litoralis
           Och 149]
 gi|161394544|gb|EDQ18867.1| multidrug resistance efflux pump, putative [Roseobacter litoralis
           Och 149]
          Length = 411

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 54/182 (29%), Gaps = 6/182 (3%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            ++  +++    V I     G + +  V+N   +  G P+   ED      ++  K  I 
Sbjct: 63  PATNSVVSYFRTVTILPQAGGRVLEIYVKNNELVNLGQPIFRLEDHSQRAQVEAAKAMIA 122

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                +   ++ L            A    EE+L   +       + V    I      +
Sbjct: 123 EADASLKVAQTDLTEAIASIAGATAALRQAEEELERNVTLRDQGSTAVRLAEIDRFENLV 182

Query: 165 KMKLTRMRSIYLNRLDLENKSSLL------RALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
             +  +  +    + + + +   L       AL      +  + K +       + +   
Sbjct: 183 AQRSAQRDAAIAQQAETQERIDSLIPAQKDNALAQFDAANAELEKTVVYAGVTGRVEQLS 242

Query: 219 QE 220
            +
Sbjct: 243 LQ 244


>gi|85860351|ref|YP_462553.1| periplasmic component of efflux system [Syntrophus aciditrophicus
           SB]
 gi|85723442|gb|ABC78385.1| periplasmic component of efflux system [Syntrophus aciditrophicus
           SB]
          Length = 462

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 70/207 (33%), Gaps = 25/207 (12%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK---------EISRDLEQNQRT 272
                 L+    + E +  L    +++  +N +  +  +             DL   +  
Sbjct: 164 AAKAKVLQAEATVAETRAKLNQFKQVWKLSNGKVPSQTEMDAAEAAFARAKADLANCRAA 223

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP---LMKIVPHSKLTY 329
            +   + L+  E    +  I SP+ G ++ N+S         S     L  +        
Sbjct: 224 VSQAQATLSASETDLSKSIIRSPVNGIVL-NRSVEPGQTVAASMTTPVLFTLAEDLAKME 282

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           ++  V    +  +++G  A      + D     F+A + +     SQ    + T   Y  
Sbjct: 283 LQVDVDEADVGKIREGQKAAFTVDAWPDRT---FEAQVVQ-TRYGSQTTEGVVT---YTT 335

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFT 416
           +LK+      ++++ LR G  A    T
Sbjct: 336 VLKVD-----NSDLSLRPGMTATASIT 357



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 42/95 (44%), Gaps = 1/95 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             + ++V+++G +    N VE+ S  SG +K  + +   ++  G  L   +  +    I 
Sbjct: 98  GNLTVTVTATGTLEP-TNSVEVGSELSGTVKSVEADFNDRVKVGRILARLDTEKLEATIT 156

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             + S++  +  +   ++ +     K +  ++ ++
Sbjct: 157 QHRASLEAAKAKVLQAEATVAETRAKLNQFKQVWK 191


>gi|149276412|ref|ZP_01882556.1| ABC transporter permease [Pedobacter sp. BAL39]
 gi|149232932|gb|EDM38307.1| ABC transporter permease [Pedobacter sp. BAL39]
          Length = 416

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 104/293 (35%), Gaps = 35/293 (11%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY-LNRLDLENKSSLLRALLSSHQKD 198
           + L ++    +      + +V      ++   +S+  L++   + +   LR L+ S Q +
Sbjct: 67  EVLPEFEEILTSPIQGALRNVLMDAGAQVKAGQSVLTLDKSAAQTEYEKLRFLIESKQNE 126

Query: 199 LTMMKNLFEKNA--------VSQNDLNQQERIVYKSTLEL------RENIHEQKNMLRHI 244
           +  ++   +K+         + Q  ++  +  V  +   L      RE++ + +  L   
Sbjct: 127 INKLRLDLDKSFYDIRSNNKIKQLRISNFKDAVASAERLLKAGGGTREDVEQAELNLSVA 186

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                +   E  N  + +  ++ + + + A + +    L++      I++   G I +  
Sbjct: 187 ELEKQQLENEIRNKQQTMKIEIREAELSLAIQKNDGQALKRKLALAEIIATRPGVITWVN 246

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                    + + L++I  +     I   ++   +  +  G  A VR        + + +
Sbjct: 247 KN-IGASISEGESLVRIA-NLSSYKIAGSISDNLMDRLHTGMPAIVRI------NDVQLR 298

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
             +  I P +S    +          +++T+     NN  LR     +V    
Sbjct: 299 GQVMSISPSVSNAIGSFD--------VQLTE----KNNKLLRPNMKVDVFLIT 339



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 62/168 (36%), Gaps = 2/168 (1%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           +  +  +++++GE+L E     + SP  G ++   ++ G+Q+  G  +LT +        
Sbjct: 55  VGDVANTINATGEVLPEFE-EILTSPIQGALRNVLMDAGAQVKAGQSVLTLDKSAAQTEY 113

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  +  I++ +  I+  +  LD          K  + R     D +              
Sbjct: 114 EKLRFLIESKQNEINKLRLDLDKSFYDIRSNNKIKQLRISNFKDAVASAERLLKAGGGTR 173

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                  L + +  +    L   ++ NK   ++  +   +  L + KN
Sbjct: 174 EDVEQAELNLSVAELEKQQLEN-EIRNKQQTMKIEIREAELSLAIQKN 220


>gi|152965834|ref|YP_001361618.1| efflux transporter, RND family, MFP subunit [Kineococcus
           radiotolerans SRS30216]
 gi|151360351|gb|ABS03354.1| efflux transporter, RND family, MFP subunit [Kineococcus
           radiotolerans SRS30216]
          Length = 474

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/391 (12%), Positives = 106/391 (27%), Gaps = 45/391 (11%)

Query: 35  SILLP--IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           + +    +   V + G +    +   +K+P +G +    V +G Q+  G  L+T +    
Sbjct: 50  AAVARGDVAEVVDAPGTVQPRASA-VVKAPAAGTVATLLVADGQQVAAGDVLMTIDSPSA 108

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                           +++  ++A     +       A  S +           +     
Sbjct: 109 --------------EANLEQAEAADAEAASSASSGSSARSSSQVAAQQRRAAADAQARFA 154

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                +        +   + ++  +R   +  SS  +AL+      L  + +  E     
Sbjct: 155 EAEQQAQAIADPAARAAALAAVQSSRTQYQLLSSQTQALVDQVNSGLGNLDSAVES---- 210

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
              L Q +R+  ++ +       +   +   I+     A    A                
Sbjct: 211 ---LGQAQRVQTRAAVAAARATVDALTVKAPISGKVSLAATGGAGS------------PA 255

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                 +L      +  +  L             +          ++ ++  +    + A
Sbjct: 256 LPAGAEQLLAGSGVQVPQGALGGGDAGAAGAPVLAQGAAVAAGSTVLSVI-DASTLSLTA 314

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V    +  V+ G  A V     A  R +   A +  +DP              Y V L 
Sbjct: 315 DVDETDVLSVQPGVAADVTVDAVAGARYR---ATVTSVDPTA---RGGGGGAVTYTVRLS 368

Query: 393 ITDLAFSDNN--IELRNGFPAEVLFTAKNTT 421
                  D         G  A V    ++ T
Sbjct: 369 YDGGTGPDGEPAATPLPGMSASVSLVVRSVT 399


>gi|332828060|gb|EGK00782.1| hypothetical protein HMPREF9455_03056 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 377

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 76/212 (35%), Gaps = 25/212 (11%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            + +S +E+   +   K+       L++E       YL E   + ++ + T      KL 
Sbjct: 116 DMQQSYMEISSRLSYLKSEYERQKTLFEEKISSQKKYL-EAESEYKRAKATHESLRQKLN 174

Query: 282 ILE---------KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           +L          K     T+ +P++G +              +  LM+IV  +K  ++  
Sbjct: 175 MLRINPSQVEQGKLASSITVYAPVSGDVTLININ-VGMAISPTDVLMEIV-DTKAMHLEL 232

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  K I ++K G    ++F     +   +F+A I +I   I  +D  +       V   
Sbjct: 233 AVFEKDIFNLKTGQ--RIKFV-IPQVSTDEFEARISQIGKSIEGKDRIIN------VYAT 283

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           + D A      +L  G   E    A +     
Sbjct: 284 LDDNAKE----KLMTGMFVEARIVADSRNALS 311



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 50/126 (39%), Gaps = 9/126 (7%)

Query: 41  EISVSSSGEI-LNEDNVVEIKSPFSGIIKK--FQVENGSQILQGTPLLTFEDIETTDLID 97
           +  V +SG+I +      ++ S  +G +K     V  GS++ +G  LLT E  E  D+  
Sbjct: 62  DAVVRASGKIDVPPQKRAKVTSFVAGFVKSTSLLV--GSKVTKGQALLTLESPEYIDMQQ 119

Query: 98  ---LKKVSIKNLRCHIDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                   +  L+   + +K+  +  ++++   LE   E +  +      +      ++ 
Sbjct: 120 SYMEISSRLSYLKSEYERQKTLFEEKISSQKKYLEAESEYKRAKATHESLRQKLNMLRIN 179

Query: 154 NYGISS 159
              +  
Sbjct: 180 PSQVEQ 185


>gi|254693771|ref|ZP_05155599.1| secretion protein HlyD family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|256113611|ref|ZP_05454431.1| secretion protein HlyD family protein [Brucella melitensis bv. 3
           str. Ether]
          Length = 347

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 68  LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFNRVSA 127

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 128 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 183

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 184 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFLAVGDPAFTLI-- 230

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 231 GADAWVNSNIKETDLTHIKVGDPATVVLDSYLDQ---PLQGEVQSITP 275



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/231 (9%), Positives = 66/231 (28%), Gaps = 24/231 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV------VEIKSPFSGIIKKF 70
            + + ++  +  I +  W             G+ ++ED+       V I    SG + + 
Sbjct: 3   RRILLIVGPVVAIAIGLWIYFS--------GGQYVSEDDSYVGAAAVAITPQVSGQVIRV 54

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V     + +G  L   +       +D  K ++      +    + L     +       
Sbjct: 55  AVGPNQPVKEGDLLFEIDPQPFQIELDQAKANLAQASEKL----AGLVLTYKQQLASVAQ 110

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +       +   +  +     F            +++ +              + L   
Sbjct: 111 AKDDVTFAQEQFNRVSALVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGT 170

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           L    Q+  +    L  K   ++ +L ++   + +        + + +N+ 
Sbjct: 171 LDKPLQQHASY---LAAK---AEVELAERNVRLTRVLAPFAGTVTQVENIQ 215


>gi|190573445|ref|YP_001971290.1| putative HlyD family secretion protein [Stenotrophomonas
           maltophilia K279a]
 gi|190011367|emb|CAQ44982.1| putative HlyD-family secretion protein [Stenotrophomonas
           maltophilia K279a]
          Length = 384

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 99/324 (30%), Gaps = 29/324 (8%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R  I      ++    +  V +    ++ E LL    + ++         + S   +L  
Sbjct: 81  RGQITVMAPQVNGYVTEVLVKDFQHVTQGEPLLRIDDRIYAQRVAQAQATLDSARAALAN 140

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                              S  +A L   + +    + L  +  VS ND     R  +++
Sbjct: 141 SDQSQAQNRAQIASARATLSAGQAELQRSRNETKRYEELAAQQLVSIND-----RDKFRT 195

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
                +   +Q      I E   E  +      K +   +E  Q       ++L +    
Sbjct: 196 AQASAQASVQQSQAQIRIAE---ETLVSTQVARKSLEAQVESAQ-------AQLELARID 245

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                I +P  G I          Y      L+ +VP     ++ A     Q   +  G 
Sbjct: 246 LANTVIHAPRDGQISEASVR-VGQYVAAGSQLLFLVP--DTLWVVANYKEGQTWGMAIGQ 302

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAF 398
            AT     +   + +  +  +++I P    +      +  +  + +V+    ++I+    
Sbjct: 303 PATFSVDAF---QGQVLRGRVQEIAPATGSEFSVLRPDNASGNFTKVVQRLPVRISINRD 359

Query: 399 SDNNIELRNGFPAEVLFTAKNTTL 422
                +LR G    V    ++  +
Sbjct: 360 QKLAKQLRPGMSVIVRVDTRSKPM 383



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 14/193 (7%)

Query: 24  SIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +++GI  ++  W +  P   SV  +        +  +    +G + +  V++   + QG 
Sbjct: 52  ALLGIALILRAWHLW-PFTSSVMVTDNAYVRGQITVMAPQVNGYVTEVLVKDFQHVTQGE 110

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRC------------HIDTEKSALDFLNNKYDVLEKA 130
           PLL  +D      +   + ++ + R                   +       + ++    
Sbjct: 111 PLLRIDDRIYAQRVAQAQATLDSARAALANSDQSQAQNRAQIASARATLSAGQAELQRSR 170

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            E++  + L             F    +S   S++    ++R      +  +     L A
Sbjct: 171 NETKRYEELAAQQLVSINDRDKFRTAQASAQASVQQSQAQIRIAEETLVSTQVARKSLEA 230

Query: 191 LLSSHQKDLTMMK 203
            + S Q  L + +
Sbjct: 231 QVESAQAQLELAR 243


>gi|218899722|ref|YP_002448133.1| hypothetical protein BCG9842_B0560 [Bacillus cereus G9842]
 gi|218541632|gb|ACK94026.1| conserved hypothetical protein [Bacillus cereus G9842]
          Length = 217

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 57  KLTDWKAEVGKNYNEN-----DKLGAVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 110

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 111 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LTGKVEQVGL 166

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 167 TTANTFSMLPSSNSTANYTKVTQVVPVKISLDHSKSVNIVPGMNVSVRIH 216


>gi|89900308|ref|YP_522779.1| secretion protein HlyD [Rhodoferax ferrireducens T118]
 gi|89345045|gb|ABD69248.1| secretion protein HlyD [Rhodoferax ferrireducens T118]
          Length = 405

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 98/278 (35%), Gaps = 32/278 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSL-------LRALLSSHQKDLTMMKNLFEK 208
            +     SL   + ++R++Y N   L+ + SL        +  ++    DL   ++L  +
Sbjct: 99  ALDQAKASLAQTVRQVRTLYANNASLQAQISLRESDVVKAQTEIARATDDLNRRQSLAGE 158

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            AVS+ +LN  +  +  +           K+ +         A  + A+          +
Sbjct: 159 GAVSREELNHSQTQLANA-----------KSAMASALAGVATARQQLASNQVMTEGVSVE 207

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
              +     +K+      +E+  + SP+ G +   +S           PLM ++   +  
Sbjct: 208 QHPSVQVAAAKVREAWLAKERAVLPSPVDGFVAR-RSVQLGQRVAAGTPLMSVI-APQQL 265

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQD 378
           ++ A     Q++H++ G +           ++  +K ++  +           P  +   
Sbjct: 266 WVDANFKEVQLRHIRIGQSVE--LTADLYGKKVAYKGVVSGLGMGTGAAFALLPAQNATG 323

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           N ++  +   V + +     + N + +     A V  T
Sbjct: 324 NWIKVVQRVPVRVALDAGELAKNPLRVGLSMIATVDVT 361



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 3/185 (1%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPI-EISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +PA  K ++ ++ + +I  + W+    +      S+     + NVV+I     G +    
Sbjct: 16  NPARKKALSAIAGVVVIAGLGWAAYDWLVASHFESTDNAYVQGNVVQITPQIGGTVVAIL 75

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            ++   +  G  L+  +  + T  +D  K S+      + T  +    L  +  + E   
Sbjct: 76  ADDTDWVKAGQALVKLDPADATLALDQAKASLAQTVRQVRTLYANNASLQAQISLRESDV 135

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              + ++       +   S      +S     L    T++ +            +  R  
Sbjct: 136 VKAQTEIARATDDLNRRQSLAGEGAVS--REELNHSQTQLANAKSAMASALAGVATARQQ 193

Query: 192 LSSHQ 196
           L+S+Q
Sbjct: 194 LASNQ 198


>gi|325128905|gb|EGC51759.1| multidrug resistance protein A [Neisseria meningitidis N1568]
          Length = 384

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 81/261 (31%), Gaps = 27/261 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 103 NELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 162

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 163 AVSQAQAAVKAALAEESSARAALGGQVALRE-----------------QPAVQTAIGRLK 205

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 206 DAWLNLQRTQIRAPTDGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 263

Query: 342 VKKGYTATVRFPHYA-DIREKKF-------KAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +K G  A +    Y   I  +               + P  +   N ++  +   V + +
Sbjct: 264 MKIGQPAELVSDLYGKQIVYRGMVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVL 323

Query: 394 TDLAFSDNNIELRNGFPAEVL 414
                  + + +      +V 
Sbjct: 324 NREDVDRHPLRIGLSMTVKVD 344



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 54  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELIQAVRQNR 113

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 114 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 173

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 174 ALAEESSARAALGGQVALREQPAVQTAIGRLKDAWLNLQRT 214


>gi|189022337|ref|YP_001932078.1| Multidrug resistance protein A [Brucella abortus S19]
 gi|254691443|ref|ZP_05154697.1| Multidrug resistance protein A [Brucella abortus bv. 6 str. 870]
 gi|254698358|ref|ZP_05160186.1| Multidrug resistance protein A [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731803|ref|ZP_05190381.1| Multidrug resistance protein A [Brucella abortus bv. 4 str. 292]
 gi|256256628|ref|ZP_05462164.1| Multidrug resistance protein A [Brucella abortus bv. 9 str. C68]
 gi|189020911|gb|ACD73632.1| Multidrug resistance protein A [Brucella abortus S19]
          Length = 313

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 60/202 (29%), Gaps = 18/202 (8%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEIS---RDLEQNQRTFADEMSKLTILEKTRE 288
           ENI    N            + + A+    IS       +   +            +   
Sbjct: 113 ENIPVAANQQVKAGARLAGVDAQIASAKANISVLEAQYNEAASSTKSLELARDKAARDLS 172

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             ++ +P  G I  N S    +     Q +  +VP     YI A     Q+ H+K G TA
Sbjct: 173 FTSLRAPFDGVI-GNLSGKKGDLVAPGQKIAALVPVD-QLYIDANFKETQLAHIKVGETA 230

Query: 349 TVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSD 400
            +        +   F   +  I P           +      T+    V ++IT    + 
Sbjct: 231 HIYVDAIDGTK---FDGKVASIAPASGAVFSLLPPENATGNFTKVVQRVPVRITIPKEAF 287

Query: 401 NNIELRNGFPAEVLFTAKNTTL 422
            + ++R G    V       T 
Sbjct: 288 ESGKIRAGLSVIVDVDT--RTA 307


>gi|37528337|ref|NP_931682.1| hypothetical protein plu4516 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787775|emb|CAE16888.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 323

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 63/409 (15%), Positives = 133/409 (32%), Gaps = 106/409 (25%)

Query: 17  LKRMTLLSIIGIIGLITWSILLP-------IEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +K+ TL +I+ +I L   ++L         ++  V +  E++             G + K
Sbjct: 1   MKKRTLFTILLVILLTAMAVLFRSHNQYLLLQGEVDAP-EVIVASKAK-------GRVIK 52

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             VE G  +  G  L+T E  E    +   + +    +  ++                  
Sbjct: 53  RHVERGDDVKAGQLLITLESPELLAQVASLEAARDQAKAQLE------------------ 94

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                                +  +       R+L+  L + ++ Y N +          
Sbjct: 95  ---------------------QSLHGTREESIRNLEAGLAQAQAEYDNAV---------- 123

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                  ++   ++++  K  VS+NDL+   R    +  +++         +        
Sbjct: 124 -------REYDRIQSVASKGYVSRNDLDNAHRSRDVAYQKMQSAKAALDEGMHG---DRI 173

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E   ++A  L++  + L + Q    D                + +P+AG +    +    
Sbjct: 174 ELRQKYAAALRQAEQQLIELQTQSHDL--------------QVKAPVAGEVGPIPA-EVG 218

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFPHYADIREKKFKAIIE 368
                + PL+ ++   +  +I      + I   V+KG    +R P   D   K+ +A I 
Sbjct: 219 ELFNANSPLVTLIRVPEAYFI--YNLREDILAKVQKGDKVKLRLPALGD---KEIEAEIR 273

Query: 369 KIDPII--SQQDNNLQTQEY----YEVILKITDLAFSDNNIELRNGFPA 411
            I P+   + +     T ++    +EV L             LR G  A
Sbjct: 274 YISPMGNYATKRATRATGDFDLRTFEVRLYPLQAIEG-----LRPGMSA 317


>gi|84502248|ref|ZP_01000396.1| hypothetical protein OB2597_19631 [Oceanicola batsensis HTCC2597]
 gi|84389608|gb|EAQ02327.1| hypothetical protein OB2597_19631 [Oceanicola batsensis HTCC2597]
          Length = 417

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 64/207 (30%), Gaps = 16/207 (7%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +  + +    ++T +      E         E   +  +  ++ L     +++Q Q   
Sbjct: 151 IETLRNQLEQSRATADATRAQLEFARSQLERTESLVDRGIAASSTLDSNVANVQQLQSNL 210

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A    ++   E+  ++ TI +P +G I          Y      LM +V       +   
Sbjct: 211 AALERQVATAEQALDKATITAPFSGMISQRNVD-PGTYVAPGTALMTLV-DITSLELEGA 268

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V       ++ G T T+            F   +E+I P+ +      +    Y      
Sbjct: 269 VPVLYAPRIRTGQTVTITVEGLGAQ---SFSGTVERIAPVAA---TGTRMLPIY------ 316

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
               F +++  LR G  A         
Sbjct: 317 --ATFGNDDGTLRGGMFASGRLVLGEK 341



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/139 (11%), Positives = 48/139 (34%), Gaps = 4/139 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ +V  +G +   +++  I +  SG + +     G    +G  L+  +     + ++  
Sbjct: 103 LQDTVRITGSLSPANHL-GIPAEVSGRVDEVLKRPGDAADEGEVLVRIDIETLRNQLEQS 161

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + +    R  ++  +S L+   +  D         +S    +        +   +V    
Sbjct: 162 RATADATRAQLEFARSQLERTESLVDRGIAASSTLDSNVANVQQLQSNLAALERQVATAE 221

Query: 157 ISSVYRSLKMKLTRMRSIY 175
            +    ++    + M S  
Sbjct: 222 QALDKATITAPFSGMISQR 240


>gi|262039914|ref|ZP_06013186.1| multidrug resistance protein MdtN [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042745|gb|EEW43744.1| multidrug resistance protein MdtN [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 341

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 77/233 (33%), Gaps = 24/233 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     + +          ++++   + +    +++   N   +       RAL+     
Sbjct: 76  LFRIDPRPYQAMLDDAKARLTTLDAQIMLTQRTIKAQEYNAQSVAAAVERARALVKQTTS 135

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
               ++ L  +   SQ DL+Q       +  EL   + + K     +             
Sbjct: 136 TRIRLEPLVPQGFASQEDLDQARTAEKAARAELEATLLQAKQASAAV------------- 182

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                   ++      A  ++++ + E   E   + +P  G +V  ++ +   YA   +P
Sbjct: 183 ------TGVDAMVAQRAGVLAQIALAELHLEFTEVRAPFNGVVVALKT-TVGQYASALKP 235

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +  ++      Y+ A      + +V+ G  A +          + F  +++ +
Sbjct: 236 VFTLL-DDDRWYVIANFRETDLNNVRPGVAARITV---MTNHNRTFNGVVDSV 284



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/184 (10%), Positives = 51/184 (27%), Gaps = 7/184 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I +  + +  ++ +G  L   +      ++D  K  +  L   I   +  +     K
Sbjct: 56  SGRIVEMPIRDNQRVRKGDLLFRIDPRPYQAMLDDAKARLTTLDAQIMLTQRTI-----K 110

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                    +   +    L K  ++        +   + S +       +    R +LE 
Sbjct: 111 AQEYNAQSVAAAVERARALVKQTTSTRIRLEPLVPQGFASQEDLDQARTAEKAARAELEA 170

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +   ++      M+        ++Q  L +      +        +   K  +  
Sbjct: 171 TLLQAKQASAAVTGVDAMVAQ--RAGVLAQIALAELHLEFTEVRAPFNGVVVALKTTVGQ 228

Query: 244 INEL 247
               
Sbjct: 229 YASA 232


>gi|300773545|ref|ZP_07083414.1| cation efflux system protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300759716|gb|EFK56543.1| cation efflux system protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 415

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 78/208 (37%), Gaps = 24/208 (11%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             ++  DL + +  +  +  +++    E         +   E N      L+++  +L  
Sbjct: 115 GVINNPDLIKTQEQLQLTNNQIKLAEVELLR-----QQELVEGNAAPLKRLQQVEMELAN 169

Query: 269 NQRTFADEMSKLTILEKTRE---QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
            +        +LT    + +   Q +I++P++GTI    +    +    S P+++IV ++
Sbjct: 170 LRAQRNSLQKQLTAGGGSIQMSSQVSIIAPMSGTISTIAA-QIGSNINASSPILEIV-NN 227

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           +  ++   V  K +  VKKG    +RF    +     ++A I++I      Q N +    
Sbjct: 228 ESLHVDVYVYEKDLPKVKKGQ--LIRFSAVNN-PGLSYEARIDQIGQAFEAQTNAVAVH- 283

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
                          +   L NG   + 
Sbjct: 284 ----------AQVLGDKTGLINGMQVQA 301



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 53/134 (39%), Gaps = 8/134 (5%)

Query: 40  IEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTF---EDIETTDL 95
           +   +  +G++   ++    + S F G++++  V+ G  + +G  +      + I+T + 
Sbjct: 69  LSDGLVLNGQLTVPNDKKAFVTSVFGGVLQQLFVQQGDVVSKGQRIGVINNPDLIKTQEQ 128

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           + L    IK     +  ++  ++        L++     E +L +   + +S   ++   
Sbjct: 129 LQLTNNQIKLAEVELLRQQELVEGNAAPLKRLQQV----EMELANLRAQRNSLQKQLTAG 184

Query: 156 GISSVYRSLKMKLT 169
           G S    S    + 
Sbjct: 185 GGSIQMSSQVSIIA 198


>gi|116617237|ref|YP_817608.1| lactococcin A ABC transporter permease protein [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|116096084|gb|ABJ61235.1| lactococcin A ABC transporter permease protein [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
          Length = 449

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 62/418 (14%), Positives = 147/418 (35%), Gaps = 56/418 (13%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSG-IIK-KFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           E  + S+GEI     +  I+S  +  IIK +   +   +I  G  L+ +++ E+   + L
Sbjct: 45  ETVIKSTGEIEPIKILRTIQSTSNNPIIKNELLTK--KEITAGDILIQYQNTESDTNLQL 102

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           +K S+KNL+ H+               + + + +  +    D      ST  + +     
Sbjct: 103 QKSSLKNLQEHVQALI-----------IYKDSIKQNQNLFTDDDNFGCSTSYQSYLSQRR 151

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM---KNLFEKNAVSQND 215
           S+    + ++     +   ++ +    +   + LS +Q  +  +    +L  KNA     
Sbjct: 152 SLSTDHQQQVNDQDRVKQQKIIISEAINKKNSELSQYQDLINAIIKNTSLSPKNAYYSTF 211

Query: 216 LNQQ----ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD------ 265
           L+ Q    E  + +     +E +   +  +  IN+       ++A +      +      
Sbjct: 212 LDYQHQTKELPISQVDKLKKETVTSIQQQIDSINDALTSYKTQYAGFSSTNLAEDALTNK 271

Query: 266 LEQNQ-RTFADEMSKLTILEKTREQK-------------TILSPIAGTIVYNQSFSSSNY 311
           L + + +  +    +L  L +  EQ              TI++  +GT+    + +    
Sbjct: 272 LNELKSQQLSSITKELETLNQEIEQTKIQHAATETSGKNTIIATESGTVNLLINKTKLTS 331

Query: 312 AQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
             Q   + +I P+   +    +   ++  +I  + +  +         + +       I 
Sbjct: 332 IPQGTNVAQIYPNLKKTPDLKVSFYISANEISEIVENQSIRYHLTE-KNSKHMVIPGNIA 390

Query: 369 KI--DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
            I  +PI ++  N      +Y+V   +       +   +  G    V      +T   
Sbjct: 391 SIPANPITTKDGN------FYQVSAILN--LRPKDYQNIHYGQTGTVSIITGKSTWIS 440


>gi|114567952|ref|YP_755106.1| secretion protein HlyD [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338887|gb|ABI69735.1| secretion protein HlyD [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 331

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 99/292 (33%), Gaps = 32/292 (10%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +A +S E + L      H   ++     +  +    ++      +      +   + ++
Sbjct: 61  AQAGDSVEARQLVAELSRHDLLAQKERDALGVLAAQARLDDLVSGARSQEIKEALARVNM 120

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             +     +++L  M+ LF + A+++  L Q      +   ELR+N          + E 
Sbjct: 121 AGSTYEQAERELERMQELFAEGAIAEEKLEQ-----SRLNSELRKNELTAAEARLSLLES 175

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                             +           + L   E   +   +LSP+ GT++  ++F 
Sbjct: 176 GSRPGA------------ISAAAAELERSKAVLKSSEALLDDLKLLSPLEGTLIS-KNFE 222

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              +      L  +       +I+  +   ++  +K G    +       +    F  ++
Sbjct: 223 EGEFVTMGATLATLA-DLHHLWIKVYIPTDELPRIKLGQKVNISVSGCEQV----FSGVV 277

Query: 368 EKID-----PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           ++I         S Q    +    + V + +T    S+ N  L+ G PA+++
Sbjct: 278 KEISSRGEFTPKSIQTKKERANVVFPVKIAVT----SNPNGILKPGMPADII 325


>gi|254489558|ref|ZP_05102760.1| GAF domain protein [Roseobacter sp. GAI101]
 gi|214041728|gb|EEB82369.1| GAF domain protein [Roseobacter sp. GAI101]
          Length = 612

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 69/203 (33%), Gaps = 16/203 (7%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ---RTFADEMSKLTI 282
               +   + ++   L  +  L D    +         R+  Q +          +++++
Sbjct: 403 QKGAVMARLEDRDIRLERLKWLGDRTKQQQEYSQALAQRERTQARILSSQIEQSDAQISL 462

Query: 283 LEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           L++  E+ TI +P  G +V  + S +     ++   L ++ P  +   +  +V  + I  
Sbjct: 463 LDQQLERMTIRAPFTGLVVSGDLSQALGAPLERGDVLFQVAPLDE-YRVTLRVDERDIHD 521

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           +  G +  +      D   +     +++I PI S     L     ++V   I D      
Sbjct: 522 LTVGASGPLVLSALPDTPYR---VAVQRITPISS----PLNGANMFDVEASIEDGPIE-- 572

Query: 402 NIELRNGFPAEVLFTAKNTTLAQ 424
              LR G             L +
Sbjct: 573 --ALRPGMEGVAKIEVDERRLVE 593



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 45/122 (36%), Gaps = 8/122 (6%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVV-EIKSPFSGIIKKFQVENGSQILQG 81
           L +I +I  + +        +   +   + +  +   + +P +G + + +   G  + +G
Sbjct: 348 LGVIALIAFVAFCYYA--TGTYRVTATTVVQGKIQRVVTAPIAGYLVQSEARAGDLVQKG 405

Query: 82  TPLLTFEDIETTDLI-----DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
             +   ED +          D  K   +  +     E++    L+++ +  +      ++
Sbjct: 406 AVMARLEDRDIRLERLKWLGDRTKQQQEYSQALAQRERTQARILSSQIEQSDAQISLLDQ 465

Query: 137 QL 138
           QL
Sbjct: 466 QL 467


>gi|254428301|ref|ZP_05042008.1| auxiliary transport protein, MFP family, putative [Alcanivorax sp.
           DG881]
 gi|196194470|gb|EDX89429.1| auxiliary transport protein, MFP family, putative [Alcanivorax sp.
           DG881]
          Length = 391

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 68/190 (35%), Gaps = 16/190 (8%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLP-------------IEISVSSS 47
           M   M + ++R    +L  + L+  + ++G        P             +E  V++ 
Sbjct: 1   MELPMSRWIRRYPKTALSFVILIVCLLLVGWRWGFASAPAIQWKTATVERGDVEELVTAL 60

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +    + V++ +  SG + +  V+ G  + QG  L   +       +D     ++ LR
Sbjct: 61  GTLEP-GDYVDVGAQVSGQLTQLHVDVGDSVEQGQLLAEIDASVQQTQVDAGLAELEALR 119

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
              + +++ L+    +Y   ++  E+       F     +    +    I  +   ++ K
Sbjct: 120 AQREQQQAELELAELQYQRQQRLREANATSDDAFQSARSTLA--ITRAQIKVLKAQIRQK 177

Query: 168 LTRMRSIYLN 177
              +     N
Sbjct: 178 QASVEGDQAN 187



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 81/237 (34%), Gaps = 18/237 (7%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             +       + D ++ +   +    ++ +  + +R   ++ LEL E  ++++  LR  N
Sbjct: 88  DSVEQGQLLAEIDASVQQTQVDAGL-AELEALRAQREQQQAELELAELQYQRQQRLREAN 146

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              D+A     + L      ++  +     + + +   +       I +P +GT+V  ++
Sbjct: 147 ATSDDAFQSARSTLAITRAQIKVLKAQIRQKQASVEGDQANLGYAKIYAPRSGTVVSLEA 206

Query: 306 FSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                    +Q    LM+I        I  +V+   +  +  G        ++  +    
Sbjct: 207 R-EGQTLNANQTTPTLMRIA-DLTTMTISTQVSEADVDSLSAGMPV-----YFNTLGNGD 259

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +          + +      +    V+L   +    +    L +G  A+V F   +
Sbjct: 260 VR-------YDSTLRQVLPTPEVVNNVVLYTAEFDIDNPQGRLMSGMTAQVFFVVDS 309


>gi|56461503|ref|YP_156784.1| HlyD family secretion protein [Idiomarina loihiensis L2TR]
 gi|56180513|gb|AAV83235.1| HlyD family secretion protein [Idiomarina loihiensis L2TR]
          Length = 351

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/265 (10%), Positives = 76/265 (28%), Gaps = 19/265 (7%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    ++    +++      +   +       + L   +K L  +++L ++ ++S 
Sbjct: 88  QAQFKQTQNAINTAKSQVNQRRAEKDAAQALLKQRESELDLAKKRLARVQSLSQQGSMSA 147

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+  +  V  +   +     +  +    I     +     +      +          
Sbjct: 148 QELDDAKAAVVSAESAVAAAKSQIASTEAAITTAISQREEAESAAEAAKAT--------- 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                 +  ++   +  T+LSP  G I Y               ++ +V  S   Y+   
Sbjct: 199 ------IERIQIQIDDSTLLSPRDGRIQYI-VSRPGEVIGSGGRVVNMVDLSD-VYMTFF 250

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVIL 391
           +  + I  +  G    +      D R     + I  +     +  +    + +  + V  
Sbjct: 251 LPTQIIGKISVGSEVRIVLDALPDYRIPANVSFISDVAQFTPKTVETQEEREKLMFRVRA 310

Query: 392 KITDLAFSDNNIELRNGFPAEVLFT 416
            I       +   ++ G P      
Sbjct: 311 SIDKNLLEQHLERVKTGLPGVAYVK 335



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 2/134 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    VE G  +L G  L   +       +   +   K  +  I+T KS ++    + 
Sbjct: 53  GRLDNVWVEEGQFVLTGDKLAKIDTTTLEAELLQTQAQFKQTQNAINTAKSQVNQRRAEK 112

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D  +   + RE +L   L K      +  +   S   + L      + S        +++
Sbjct: 113 DAAQALLKQRESEL--DLAKKRLARVQSLSQQGSMSAQELDDAKAAVVSAESAVAAAKSQ 170

Query: 185 SSLLRALLSSHQKD 198
            +   A +++    
Sbjct: 171 IASTEAAITTAISQ 184


>gi|15676235|ref|NP_273367.1| fatty acid efflux system protein [Neisseria meningitidis MC58]
 gi|7225539|gb|AAF40763.1| fatty acid efflux system protein [Neisseria meningitidis MC58]
 gi|316984319|gb|EFV63293.1| multidrug resistance protein A [Neisseria meningitidis H44/76]
 gi|325141044|gb|EGC63549.1| multidrug resistance protein A [Neisseria meningitidis CU385]
 gi|325199513|gb|ADY94968.1| multidrug resistance protein A [Neisseria meningitidis H44/76]
          Length = 384

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 103 NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 162

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 163 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 205

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 206 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 263

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 264 MKIGQPAEL 272



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 54  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 113

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 114 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 173

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 174 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRT 214


>gi|78779618|ref|YP_397730.1| secretion protein HlyD [Prochlorococcus marinus str. MIT 9312]
 gi|78713117|gb|ABB50294.1| Secretion protein HlyD [Prochlorococcus marinus str. MIT 9312]
          Length = 353

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/299 (20%), Positives = 109/299 (36%), Gaps = 35/299 (11%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D+++K    R   +L  L  +    +  F    S       +++   + I  + ++   +
Sbjct: 3   DLIKKNINLRSGIILLSLAIFFVFITNSFKKNKSKDISDFVVQVE--KGILSDSINTSGE 60

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQ---ERIVYKSTLELRENIHEQKNM 240
              +R      +K   + +   E+   V ++ +      E  +YK   EL  NI +QK+ 
Sbjct: 61  VKAIRTSNIGPRKQGVIKEIKVEEGDLVKKDQVLASLDDEDFIYKIE-ELELNIEKQKSE 119

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                 LY E  +   +Y           + ++    +KL   +  +    I +P  G I
Sbjct: 120 FLRREYLYQEGAVSKEDYESY--------KNSYDISSAKLNDAKAEKSFYIIKAPYGGKI 171

Query: 301 VYNQSFSSSNYAQQSQPLMK-------IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
              +     +Y   S  L         I   S+   I AKV    I  +K G  A+VR  
Sbjct: 172 TA-KYAEIGSYVTPSTNLSSDSKTKNFIFELSEGLEIVAKVPESDIGRIKIGQEASVRIE 230

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
            Y   +     AI+EKI     + +N       +EV L   D++      E++ G  A+
Sbjct: 231 AYPSKKY---TAIVEKIATRAVKDNNVTS----FEVTLNFKDIS-----EEIKIGMTAD 277



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 21/158 (13%)

Query: 20  MTLLSIIGIIGLITWSI-----------LLPIEISVSSSGEILNEDNVVEIK-----SPF 63
           + LLS+      IT S            ++ +E  + S   I     V  I+        
Sbjct: 15  IILLSLAIFFVFITNSFKKNKSKDISDFVVQVEKGILSD-SINTSGEVKAIRTSNIGPRK 73

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G+IK+ +VE G  + +   L + +D +    I+  +++I+  +    +E    ++L  +
Sbjct: 74  QGVIKEIKVEEGDLVKKDQVLASLDDEDFIYKIEELELNIEKQK----SEFLRREYLYQE 129

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
             V ++ +ES +        K +   ++   Y I + Y
Sbjct: 130 GAVSKEDYESYKNSYDISSAKLNDAKAEKSFYIIKAPY 167


>gi|312886461|ref|ZP_07746070.1| secretion protein HlyD family protein [Mucilaginibacter paludis DSM
           18603]
 gi|311301089|gb|EFQ78149.1| secretion protein HlyD family protein [Mucilaginibacter paludis DSM
           18603]
          Length = 352

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 97/288 (33%), Gaps = 22/288 (7%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E LL      +    +     + +    L     ++ +I  ++   +   S+    L+  
Sbjct: 82  ELLLTIDDSEYKIAVQQTAADLEAAKADLASAEAQINNISSDKGVADAGVSVEEVALAKA 141

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++DL   + LF   +++Q+ L         S    +  I +  +    + ++  +     
Sbjct: 142 KRDLNRDQALFNDGSITQHQL-------DNSQSAYQSAIKQVVSSKSRVTQVSTQTGT-- 192

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                  +  +++ +   A   ++L   +       IL+P  G I    +     + Q  
Sbjct: 193 ------ANAQIQRAKANVAVREAQLENAKLNLSYTQILAPSTGKI-GKTNLQQGQFVQAG 245

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDPII 374
           Q L  ++ +++  +I A     QI+H++ G    +    Y D     K     +      
Sbjct: 246 QQLFSVI-NNEHFWIVANFKETQIEHMRVGQAVKIEVDGYPDKEITGKIAEFSDATGAKF 304

Query: 375 SQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAK 418
           S    +  +  + +V     +KI     +     L+ G    V    K
Sbjct: 305 SLLPPDNSSGNFVKVTQRVPVKIELDDPAGLREFLKAGLSVTVDVKVK 352



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 75/244 (30%), Gaps = 7/244 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E N + + S  SG IK F +++   + +G  LLT +D E    +      ++  +  + 
Sbjct: 52  VESNAIPVLSRASGYIKDFALKDYQMVKKGELLLTIDDSEYKIAVQQTAADLEAAKADLA 111

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           + ++ ++ +++   V +      E  L     K      +      S     L    +  
Sbjct: 112 SAEAQINNISSDKGVADAGVSVEEVALA--KAKRDLNRDQALFNDGSITQHQLDNSQSAY 169

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLE 229
           +S     +  +++ + +     +    +   K      AV +  L   +      +    
Sbjct: 170 QSAIKQVVSSKSRVTQVSTQTGTANAQIQRAK---ANVAVREAQLENAKLNLSYTQILAP 226

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               I +         +   +      N    I  + ++ Q         + I       
Sbjct: 227 STGKIGKTNLQQGQFVQAGQQLFSVINNEHFWIVANFKETQIEHMRVGQAVKIEVDGYPD 286

Query: 290 KTIL 293
           K I 
Sbjct: 287 KEIT 290


>gi|312960756|ref|ZP_07775261.1| putative membrain protein [Pseudomonas fluorescens WH6]
 gi|311284414|gb|EFQ62990.1| putative membrain protein [Pseudomonas fluorescens WH6]
          Length = 302

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 86/261 (32%), Gaps = 25/261 (9%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           TR   + +  + +  +       LS+         +L  +       L  Q+R       
Sbjct: 36  TRDARVSVQVIRIAPQVCGQIDQLSATDNQWVAKGDLLYRIDARAYRLAVQQR--AAEFA 93

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E+R    +++   +    L      E  +     +RDL   Q       S+L   +   +
Sbjct: 94  EVRSVFEQRRAQFKRRTLLAGAIAQEEID---NAARDLAVAQARLDAAASQLAQAQLDLD 150

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + T+ SP+ G +   +     +YAQ     + +V  +   +I       ++  V+ G   
Sbjct: 151 RTTVRSPVDGYVTQLRL-QPGDYAQAGTTNLFVV-DAHSFWITGYFEETKLAQVRIGAPV 208

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQ------QDNNLQTQEYY-------EVILKITD 395
           +++   +A       +  +  +   I+            Q    +        V ++I +
Sbjct: 209 SIKLMGFA----PLLQGHVASMGRGIADTNELRNDSGLPQVSPTFSWIRLAQRVPVRI-E 263

Query: 396 LAFSDNNIELRNGFPAEVLFT 416
           L    + + L  G  A V  T
Sbjct: 264 LDKVPDGVALAAGMTASVEVT 284


>gi|325130938|gb|EGC53666.1| multidrug resistance protein A [Neisseria meningitidis OX99.30304]
 gi|325136895|gb|EGC59492.1| multidrug resistance protein A [Neisseria meningitidis M0579]
 gi|325143071|gb|EGC65421.1| multidrug resistance protein A [Neisseria meningitidis 961-5945]
 gi|325202860|gb|ADY98314.1| multidrug resistance protein A [Neisseria meningitidis M01-240149]
 gi|325203433|gb|ADY98886.1| multidrug resistance protein A [Neisseria meningitidis M01-240355]
 gi|325208853|gb|ADZ04305.1| fatty acid resistance protein A [Neisseria meningitidis NZ-05/33]
          Length = 384

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 103 NELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 162

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 163 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 205

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 206 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 263

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 264 MKIGQPAEL 272



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 54  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELIQAVRQNR 113

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 114 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 173

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 174 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRT 214


>gi|289207690|ref|YP_003459756.1| efflux transporter RND family, MFP subunit [Thioalkalivibrio sp.
           K90mix]
 gi|288943321|gb|ADC71020.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           K90mix]
          Length = 349

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/265 (10%), Positives = 78/265 (29%), Gaps = 24/265 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F    +      + ++   R   + R  +  ++S     +     D      L  +  VS
Sbjct: 26  FETATAERQTLAQERILDGRVEAVQRSTISAQTSGRIREIYVDVDDFVEADELLLR--VS 83

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            ++   +         E R   +E ++    I +++D   +  + + +    +L+  +  
Sbjct: 84  DSEQQARVSQAEGDLAEARARFNEARSEFNRIQDVFDRGVVSRSEFER-AEAELQSARAR 142

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                 ++    +      + +P +G +                PL+  +       +  
Sbjct: 143 LRSAEGRVEEAREQLGYTEVFAPYSGIVTERHV-EVGESVSPGSPLLSGI-SLDRLRVEV 200

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  + I  V++   A V         +++  A    I P      +       + + + 
Sbjct: 201 DVPQRLIHAVRERREAEVLL-----NDDRRLAAESLTIFPYADPASST------FRIRVN 249

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTA 417
           + +      ++ L  G         
Sbjct: 250 LPE----QEDLGLFPGM----FVKT 266



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 3/115 (2%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
               I +  SG I++  V+    +     LL   D E    +   +  +   R   +  +
Sbjct: 50  QRSTISAQTSGRIREIYVDVDDFVEADELLLRVSDSEQQARVSQAEGDLAEARARFNEAR 109

Query: 115 SALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           S  + + + +D   V    FE  E +L     +  S   +V        Y  +  
Sbjct: 110 SEFNRIQDVFDRGVVSRSEFERAEAELQSARARLRSAEGRVEEAREQLGYTEVFA 164


>gi|332160633|ref|YP_004297210.1| multidrug resistance protein A [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604502|emb|CBY26000.1| membrane fusion component of tripartite multidrug resistance system
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325664863|gb|ADZ41507.1| multidrug resistance protein A [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863866|emb|CBX73958.1| multidrug resistance protein A [Yersinia enterocolitica W22703]
          Length = 390

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 91/277 (32%), Gaps = 34/277 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +   +L +  LS  Q DL     L   +A+ +
Sbjct: 98  EQAYEQAQTALANTVRQTHQLIINSKQYQANIALKKTELSKAQNDLKRRVVLGSVDAIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +   L   I +       +     E                   Q   
Sbjct: 158 EELQHARDAVDAAQASLDVAIAQYNANQALVLNTPLE------------------KQPAV 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +KL       ++  ++SPI G +   +S           PLM ++P ++  +I A 
Sbjct: 200 EQAAAKLRDAWLALQRTKVVSPITGFVSR-RSVQVGAEIANGAPLMAVIPANE-MWIDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G  ATV    Y D     F+  +  +D          P  +   N ++ 
Sbjct: 258 FKETQLANMRIGQPATVVTDFYGDDV--VFQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +   V +++     +++ + +  G    V     +T
Sbjct: 316 VQRLPVRIELDAKQLAEHPLRI--GLSTTVRVDTADT 350



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-- 109
              N V+I S   G +     EN   +  G  LLT +  +     +  + ++ N      
Sbjct: 57  VSGNQVQIMSQVPGSVVSVNFENTDLVKSGDILLTLDPTDAEQAYEQAQTALANTVRQTH 116

Query: 110 ---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              I++++   +    K ++ +   + +   +L  +        +     + +   SL +
Sbjct: 117 QLIINSKQYQANIALKKTELSKAQNDLKRRVVLGSVDAIGREELQHARDAVDAAQASLDV 176

Query: 167 KLTR--MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            + +       +    LE + ++ +A        L + + 
Sbjct: 177 AIAQYNANQALVLNTPLEKQPAVEQAAAKLRDAWLALQRT 216


>gi|299145347|ref|ZP_07038415.1| periplasmic component of efflux system [Bacteroides sp. 3_1_23]
 gi|298515838|gb|EFI39719.1| periplasmic component of efflux system [Bacteroides sp. 3_1_23]
          Length = 406

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 71/215 (33%), Gaps = 17/215 (7%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDL 266
             +++ D    +  +            E +   ++        E +L      ++   + 
Sbjct: 86  QLIAEMDRATLQSELASQQATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ + ++    + L   E+     TI SPI G ++  +   +            L  I  
Sbjct: 146 QKAKSSYDSSKASLAKAERNLAYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNN 380
                 + A V    I  V +G  A+     Y +     F+ ++ +I   D   +   + 
Sbjct: 205 DLTQMQVVADVDEADIGGVVEGQRASFTVDAYPND---VFEGVVTQIRLGDASSTSSTST 261

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             T   YEV++        + +++L+    A V  
Sbjct: 262 TTTVVTYEVVISAP-----NPDLKLKPRLTANVTI 291



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 54/142 (38%), Gaps = 6/142 (4%)

Query: 35  SILLP--IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           + +    I  SV+++G I     V E+ +  SGII K  V+  S + +G  +   +    
Sbjct: 38  AYVSKGDISNSVTATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSVVTKGQLIAEMDRATL 96

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              +  ++ +    +   + +K   +    L+ K  + +  FE            Y S+ 
Sbjct: 97  QSELASQQATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNYQKAKSSYDSSK 156

Query: 150 SKVFNYGISSVYRSLKMKLTRM 171
           + +     +  Y ++   +  +
Sbjct: 157 ASLAKAERNLAYATITSPIDGV 178


>gi|282600340|ref|ZP_06257556.1| putative membrane fusion protein [Providencia rustigianii DSM 4541]
 gi|282565589|gb|EFB71124.1| putative membrane fusion protein [Providencia rustigianii DSM 4541]
          Length = 282

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 84/251 (33%), Gaps = 24/251 (9%)

Query: 181 LENKSSLLRALLSSHQKDLTMM--KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           +  + S + A +S   + L ++  + + +   +   D    +  + +S +EL E I +  
Sbjct: 38  IRAEVSEITAEVSGKIEKLLIVDNQEVKKNELLLVVDPTDYDIKLRESEIELNELIVQYN 97

Query: 239 NMLRHINELYDEANLEFA-NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                +      + +  +   L++    L+   +       K+   +    +  I SP+ 
Sbjct: 98  FAKSQLARRSKLSQVAISKEELEDAKSRLDSLTKKIELSKVKIEKAKLDLSRTEIRSPVN 157

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I         NY     PL  I+      Y+ A +   ++++V      TV       
Sbjct: 158 GFITNLNLR-KGNYISAGAPLFAII-DEDSYYVIAYLEETKMRNVAVDNNVTVTL----Y 211

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQ------EYY-------EVILKITDLAFSDNNIE 404
              ++ K  ++ I   I   ++    Q        Y        V +KI+      + + 
Sbjct: 212 SNNEELKGKVQSIGRAIDDNNSRTGNQLLENVEPNYPWVRLAQRVPIKISLNNI--DGVH 269

Query: 405 LRNGFPAEVLF 415
           L  G    V  
Sbjct: 270 LIPGTTCTVFI 280



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 5/110 (4%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I+K  + +  ++ +   LL  +  +    +   ++ +  L    +  KS L   +  
Sbjct: 50  SGKIEKLLIVDNQEVKKNELLLVVDPTDYDIKLRESEIELNELIVQYNFAKSQLARRSKL 109

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
             V        +E+L D   +  S   K+    +      L +  T +RS
Sbjct: 110 SQVAIS-----KEELEDAKSRLDSLTKKIELSKVKIEKAKLDLSRTEIRS 154


>gi|325105172|ref|YP_004274826.1| efflux transporter, RND family, MFP subunit [Pedobacter saltans DSM
           12145]
 gi|324974020|gb|ADY53004.1| efflux transporter, RND family, MFP subunit [Pedobacter saltans DSM
           12145]
          Length = 354

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 66/209 (31%), Gaps = 25/209 (11%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE------ 261
              VS+  + +  R+   +   L     E  +  R   E   +  +      +       
Sbjct: 78  SGRVSKIYVEEGSRVSKGTI--LARIDAEILDTDRETAEATYQNAVRDLQRYESSFATGG 135

Query: 262 -ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
              + L+Q +    +   +L   +K      I S I G IV  +             L +
Sbjct: 136 VTQQQLDQARLNAQNAKLRLQQQQKKLNDANIRSSING-IVNKKMIEVGAVVAPGTQLFE 194

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +V       ++  V   Q+ ++K G    +    + D +   F   +  I     +  N 
Sbjct: 195 LV-DVSKLKLKVNVNENQVANLKIGDAVQILSSVFPDEK---FSGKVTFIAAKADETLN- 249

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGF 409
                 + + +++T+   +     LR G 
Sbjct: 250 ------FPIEVEVTNNVKN----SLRAGM 268



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 53/140 (37%), Gaps = 1/140 (0%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + K  VE GS++ +GT L   +        +  + + +N    +   +S+       
Sbjct: 78  SGRVSKIYVEEGSRVSKGTILARIDAEILDTDRETAEATYQNAVRDLQRYESSFATGGVT 137

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              L++A  + +   L    +            I+ +     +++  + +      +L +
Sbjct: 138 QQQLDQARLNAQNAKLRLQQQQKKLNDANIRSSINGIVNKKMIEVGAVVAPGTQLFELVD 197

Query: 184 KSSLLRALLSSHQKDLTMMK 203
             S L+  ++ ++  +  +K
Sbjct: 198 -VSKLKLKVNVNENQVANLK 216


>gi|312115596|ref|YP_004013192.1| efflux transporter RND family, MFP subunit [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220725|gb|ADP72093.1| efflux transporter, RND family, MFP subunit [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 387

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 71/215 (33%), Gaps = 28/215 (13%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-----ISRDLEQNQRTFA 274
           ER            +  +            + +L  + +  +        DL ++  T  
Sbjct: 91  ERSRAALAAAKARVVQAEATAFERSKNFDRQKSLNASRFTSDTALDFARADLGRSTATVD 150

Query: 275 DEMSKLTILEKTREQ-------KTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHS 325
              + + + E   +Q         + SP+ G ++  +S         S   P++ I+  +
Sbjct: 151 SARADVRVAEAELKQNETALSKTKLYSPVDGVVLK-RSVEPGQTVAASFQPPILFIIAEN 209

Query: 326 -KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
            K   +R  V    +  V+ G  AT     Y   R     A IE++    S   N++ T 
Sbjct: 210 LKRVELRVDVDEADVGKVRVGQKATFTVEAYPGRRFP---ARIEQV-RFASDTTNHVVT- 264

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             Y+ IL+       + ++ LR G  A        
Sbjct: 265 --YKAILRAD-----NPDLVLRPGMTATADIVVDE 292



 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 35/81 (43%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            N VE+ S  SGII+K  V++   +  G  +   + +    +++  + ++   +  +   
Sbjct: 48  TNQVEVSSELSGIIRKVLVDHNDVVKAGQVVAELDTVTLNAMVERSRAALAAAKARVVQA 107

Query: 114 KSALDFLNNKYDVLEKAFESR 134
           ++     +  +D  +    SR
Sbjct: 108 EATAFERSKNFDRQKSLNASR 128


>gi|222081267|ref|YP_002540630.1| Curdlan synthesis protein [Agrobacterium radiobacter K84]
 gi|221725946|gb|ACM29035.1| Curdlan synthesis protein [Agrobacterium radiobacter K84]
          Length = 432

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 132/392 (33%), Gaps = 41/392 (10%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            + R+T+  ++  I +I    L  I    S  G +        I +P  G+I     + G
Sbjct: 28  RITRITVGLLLLAIAIIV--SLPAITGFTSRDGTV--NARFAIINAPIDGVIAGEPAKVG 83

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +   L    +          +  + +L    +T +  +  L  + D L +  E   
Sbjct: 84  VPVKESQTLAEISNPRVN------RAILASLEADRNTARDRVIALKTERDELSQLREQLS 137

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L  F     S   +        V  S    L     +   R+DLE+K  L R ++ + 
Sbjct: 138 NRLEVFKQTTISNLEREVEILRKKVEVSQAQDLVAQVDL-NRRMDLESKGILTRRMVDAA 196

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI---HEQKNMLRHINELYDEAN 252
           +          E   +S   + Q ++ +      LR+ I    + +N + +  +  DE  
Sbjct: 197 RAAGAATGGEVE---ISNLTVEQLQQRLNA----LRQGIFVSGDGQNDVPYSRQRQDEVV 249

Query: 253 LEFAN---YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +  ++    + E      + ++   +E S+++ LE         +P  G +      + S
Sbjct: 250 VRISDLNSRIAENETRAAEVEKQLVEEGSRVSNLESAAA----TAPFDGVVWSRSIVNGS 305

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           N    ++ +  +    +  ++   V       +  G  A VR       R   FK  +  
Sbjct: 306 NVVLNNELVRLL--DCRELFVDILVPEVDYDEIYPGLAAQVRL----FGRSDVFKGTVTS 359

Query: 370 -------IDPIISQQDNNLQTQEYYEVILKIT 394
                  ++         + +Q    + +++ 
Sbjct: 360 VRGSSAAVESDSFAASLPVSSQRNARIRVRLE 391


>gi|269961964|ref|ZP_06176319.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833287|gb|EEZ87391.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 371

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 66/183 (36%), Gaps = 18/183 (9%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +   +  + E   +A     N   +        Q    D  + L+ +E   +   + +P 
Sbjct: 123 RAKAMLRVKEKEFKAAESLKNRGLQGEVAFATAQAALVDARANLSNVETALKNTKVRAPF 182

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G I+ ++     ++     P+  ++   +   I A V+ + IQ++K+G  A VR     
Sbjct: 183 DG-ILDHRFVEVGDFVGVGDPIATVI-DLEKLVIEADVSERHIQYLKEGQVADVR----- 235

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            I     +  I  I  + S   N       + + ++I +   +        G  AEV+ +
Sbjct: 236 TINNLHHQGSIRYIGRVSSTSTNT------FPIEIEIDNRESAMP-----AGISAEVVLS 284

Query: 417 AKN 419
              
Sbjct: 285 LSE 287



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 4/100 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V+ G  + QG  +   +       +D++    K +    + E  A + L N+ 
Sbjct: 90  GKIISLNVQKGQSVKQGQVIANID----ERDLDIQLKRAKAMLRVKEKEFKAAESLKNRG 145

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
              E AF + +  L+D      +  + + N  + + +  +
Sbjct: 146 LQGEVAFATAQAALVDARANLSNVETALKNTKVRAPFDGI 185


>gi|160885959|ref|ZP_02066962.1| hypothetical protein BACOVA_03964 [Bacteroides ovatus ATCC 8483]
 gi|156108772|gb|EDO10517.1| hypothetical protein BACOVA_03964 [Bacteroides ovatus ATCC 8483]
          Length = 406

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 71/215 (33%), Gaps = 17/215 (7%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDL 266
             +++ D    +  +            E +   ++        E +L      ++   + 
Sbjct: 86  QLIAEMDRATLQSELASQQATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ + ++    + L   E+     TI SPI G ++  +   +            L  I  
Sbjct: 146 QKAKSSYDSSKASLAKAERNLAYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNN 380
                 + A V    I  V +G  A+     Y +     F+ ++ +I   D   +   + 
Sbjct: 205 DLTQMQVVADVDEADIGGVVEGQRASFTVDAYPND---VFEGVVTQIRLGDASSTSSTST 261

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             T   YEV++        + +++L+    A V  
Sbjct: 262 TTTVVTYEVVISAP-----NPDLKLKPRLTANVTI 291



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 52/135 (38%), Gaps = 4/135 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII K  V+  S + +G  +   +       +  +
Sbjct: 45  ISNSVTATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSVVTKGQLIAEMDRATLQSELASQ 103

Query: 100 KVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + +    +   + +K   +    L+ K  + +  FE            Y S+ + +    
Sbjct: 104 QATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNYQKAKSSYDSSKASLAKAE 163

Query: 157 ISSVYRSLKMKLTRM 171
            +  Y ++   +  +
Sbjct: 164 RNLAYATITSPIDGV 178


>gi|320104540|ref|YP_004180131.1| RND family efflux transporter MFP subunit [Isosphaera pallida ATCC
           43644]
 gi|319751822|gb|ADV63582.1| efflux transporter, RND family, MFP subunit [Isosphaera pallida
           ATCC 43644]
          Length = 464

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 11/169 (6%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           A ++ +         K+ LE      E+   L            +  +   ++S  LE+ 
Sbjct: 114 ATARQNALHAAIDQAKADLEKARRDLERLRDLSTRRASSSTEMADALSMQAKMSAALERA 173

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVP 323
           +    +  + +    +  E+  I +PI G +                       LM IV 
Sbjct: 174 RHELTESDAAIREAREYLERTEIKAPIPGVVANLDV-EVGEVVIAGTTNLPGTVLMSIV- 231

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             +   IRA+V    I   + G  A V      D        ++++I P
Sbjct: 232 DLERMRIRAEVDETDIVRARPGQIARVYLQADPDH---PIPGVVDRIAP 277



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 66/205 (32%), Gaps = 2/205 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  ++S+ G +   +    I S   G + K  V+ G ++ QG  L+  +  +    +D  
Sbjct: 56  LTATISAPGVVEAIEEAQ-IASQVIGRVVKVAVKEGDRVAQGDLLVKLDPADAQARLDSA 114

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
                 L   ID  K+ L+      + L      R     +                 + 
Sbjct: 115 TARQNALHAAIDQAKADLEKARRDLERLRDLSTRRASSSTEMADALSMQAKMSAALERAR 174

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
              +      R    YL R +++     + A L     ++ +         V    +   
Sbjct: 175 HELTESDAAIREAREYLERTEIKAPIPGVVANLDVEVGEVVIAGTTNLPGTV-LMSIVDL 233

Query: 220 ERIVYKSTLELRENIHEQKNMLRHI 244
           ER+  ++ ++  + +  +   +  +
Sbjct: 234 ERMRIRAEVDETDIVRARPGQIARV 258


>gi|260461152|ref|ZP_05809401.1| secretion protein HlyD family protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259033186|gb|EEW34448.1| secretion protein HlyD family protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 395

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 93/309 (30%), Gaps = 30/309 (9%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++  V E       + LL      +       +  I+++ ++L     + ++   +    
Sbjct: 103 DQVKVSENQLVKAGDPLLTIDDGDYKIAVAQADAQIATLSKTLDRIDAQTKAAQASLQQA 162

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +    +A  S+  +       L + +  +Q  L+  +  + ++   L     +     
Sbjct: 163 QAQKVADQAAASNAARAQQRAAQLVKTHVGTQAQLDDAQTALDQANAALVGADAQIAAAQ 222

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
            +I  L                    ++  T A          +      + +P  G +V
Sbjct: 223 ANIGVL---------------EAQRAESASTLASLQLSRDKAARDLSFTVLKAPYDG-VV 266

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
            N+S    +     Q L  +VP     YI A     Q+  +  G    +          +
Sbjct: 267 GNRSVEQGDLVSPGQKLAVVVPMD-KLYIVANFKETQLARLVPGEKVNISVDAID---GQ 322

Query: 362 KFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             +  +  + P           +      T+    V ++I   A +    +LR G    V
Sbjct: 323 PIQGTVSSLAPASGAVFSLLPPENATGNFTKVVQRVPVRIDVPADALKTGKLRAGL--SV 380

Query: 414 LFTAKNTTL 422
           +    + T 
Sbjct: 381 VVNVDSRTA 389



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/255 (12%), Positives = 76/255 (29%), Gaps = 27/255 (10%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + + +V     +  G PLLT +D +        K+++      I T    LD ++ +
Sbjct: 99  SGYVDQVKVSENQLVKAGDPLLTIDDGDY-------KIAVAQADAQIATLSKTLDRIDAQ 151

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               + + +                 +           + +K  +     +   +  L+ 
Sbjct: 152 TKAAQASLQQ-----AQAQKVADQAAASNAARAQQRAAQLVKTHVGTQAQLDDAQTALDQ 206

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR---------ENI 234
            ++ L    +        +  L  + A S + L   +    K+  +L            +
Sbjct: 207 ANAALVGADAQIAAAQANIGVLEAQRAESASTLASLQLSRDKAARDLSFTVLKAPYDGVV 266

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI-- 292
             +      +     +  +        I  + ++ Q        K+ I     + + I  
Sbjct: 267 GNRSVEQGDLVSPGQKLAVVVPMDKLYIVANFKETQLARLVPGEKVNISVDAIDGQPIQG 326

Query: 293 ----LSPIAGTIVYN 303
               L+P +G +   
Sbjct: 327 TVSSLAPASGAVFSL 341


>gi|238783301|ref|ZP_04627325.1| HlyD family secretion protein [Yersinia bercovieri ATCC 43970]
 gi|238715724|gb|EEQ07712.1| HlyD family secretion protein [Yersinia bercovieri ATCC 43970]
          Length = 352

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 95/288 (32%), Gaps = 26/288 (9%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                L   +    S++    +  +V+E +   R + L       +    +     +   
Sbjct: 45  SEDAELGASVVHIASSVPGRISAINVVENSKVRRGDLLFSIEPDLYRLQVEQAQAELKMA 104

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +   +   + +   N    + +    +A L    + L  ++ L  K  V+   ++   
Sbjct: 105 QAARDTQQRTVVAEQSNAAITDEQIVRAQANLKLATQTLARLQPLLPKGYVTAQQVDDAA 164

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
              + + + L++ + +       ++                        +       + L
Sbjct: 165 TAKHDAEVSLKQALKQSFAAQALVSST-------------------AAAEALVVARRAAL 205

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            I E+      I +P  G +V     S+  +    Q +  ++ +++  +  A     +++
Sbjct: 206 AIAERELANTQIRAPHDGRVVGLTV-SAGEFVVPDQAIFTLI-NTEHWHASAFFRETELK 263

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD--NNLQTQEY 386
           H+K G  ATV        R++  +  +E I   +S +D  N  +   Y
Sbjct: 264 HIKVGDCATVYVMA---DRQRAIEGRVEGIGWGVSSEDMLNIPRGLPY 308


>gi|254248098|ref|ZP_04941418.1| Secretion protein HlyD [Burkholderia cenocepacia PC184]
 gi|124874599|gb|EAY64589.1| Secretion protein HlyD [Burkholderia cenocepacia PC184]
          Length = 349

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 104/366 (28%), Gaps = 81/366 (22%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P+   RM  L+I+ + G+   +       +  S+ +   + +VV + SP  G I +  
Sbjct: 7   TRPSVKGRMIALAIVAL-GIAALAYAYHRTTAYPSTDDASIDADVVHVASPVGGRIVQLA 65

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V    ++ +G  L   + +         ++S+   +  ++  ++                
Sbjct: 66  VHENQRVAKGDLLYVIDPVPY-------RLSVAQAQADLELARA---------------- 102

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                                          SL  +   +     N      +       
Sbjct: 103 -------------------------------SLDTRRRSLIGERSNASVAAEQVKRATQN 131

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                +D+  +  L  +  VS    +Q +     +++ L +   +Q+   + I       
Sbjct: 132 YDLATRDVNRLAPLAAQGYVSAQQFDQAKVRQRDASVSLAQAQEQQRASAQTIG------ 185

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                        D      T     + L   +   +   + +P  G +           
Sbjct: 186 -------------DDADAIATLHAREAALARAQHALDDTVVRAPHDGLVTGLSVL-PGET 231

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKI 370
              +Q +  ++  S+   +        +  +  G  ATV    Y+ I R +     +  I
Sbjct: 232 LAPNQSIFTLIDASEWFAV-GNFRETSLNRIAVGDCATV----YSMIDRSRPLTGKVVGI 286

Query: 371 DPIISQ 376
              I+ 
Sbjct: 287 GAGIAD 292


>gi|315657279|ref|ZP_07910161.1| membrane-fusion protein [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315491751|gb|EFU81360.1| membrane-fusion protein [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 695

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 91/312 (29%), Gaps = 24/312 (7%)

Query: 88  EDIETTDLID----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           ++     L+D    L+  + +     ++  ++     + K      A E R+    D   
Sbjct: 223 DNRTLQALLDQENALRSANQEAENAKMEANRAGAAVADAKTQRDIAAIE-RDSAKDDLAL 281

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                     +  + +    L   +   +      +   +             KD    +
Sbjct: 282 ARKELERIKKDPTLKADPNKLAELIEATKQRIAELMSEVDAKDQNADATEKAVKDAWSQQ 341

Query: 204 NLFEKNA--------VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              ++NA        +++       R +     +  E + + +  +       D A +  
Sbjct: 342 AQAKQNANHASENLGMARRQFRAALRQIDSQIADAGEAVAKAQTGVSDAKVALDSAKIHA 401

Query: 256 ANYLKEISRDLEQNQRTF----ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           A  +    R L   Q T     A+  S +  L        + SP+AG +    S ++   
Sbjct: 402 AQEVNSNLRALRAAQATAGSGMAEGQSAIQKLRADISSAHVTSPMAGIV---TSVTAKVG 458

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           A     LM  V   +   I  ++    +  +  G   T   P   D   K+F   +  I 
Sbjct: 459 AAPEGSLMT-VEDDQNMVIETQIKESGVAKLNVGNQVTFTTPATGD---KEFTGTVAFIS 514

Query: 372 PIISQQDNNLQT 383
           P    Q      
Sbjct: 515 PAAVDQTAAPSG 526



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 77/235 (32%), Gaps = 17/235 (7%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++   V+ G ++ +G  L   +  E    +  ++  +   R    T+++++D     Y  
Sbjct: 125 VQTLNVKPGDRVSRGQFLAQLDSSEAMSQLSSQQSQLNESRV---TQQNSIDEAAQNYQN 181

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            + A +   + L   +    +   +  N  + +     +MK  +        LD EN   
Sbjct: 182 AKSALD---QGLNQDIRGAQTALHEAQNEYVKASRAYDQMKQEKDNRTLQALLDQENALR 238

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ-------KN 239
                  + + +           A +Q D+   ER   K  L L     E+       K 
Sbjct: 239 SANQEAENAKMEANRAGAAVAD-AKTQRDIAAIERDSAKDDLALARKELERIKKDPTLKA 297

Query: 240 MLRHINELYDEANLEFANYLKEISRD---LEQNQRTFADEMSKLTILEKTREQKT 291
               + EL +      A  + E+       +  ++   D  S+    ++     +
Sbjct: 298 DPNKLAELIEATKQRIAELMSEVDAKDQNADATEKAVKDAWSQQAQAKQNANHAS 352


>gi|289548572|ref|YP_003473560.1| efflux transporter RND family, MFP subunit [Thermocrinis albus DSM
           14484]
 gi|289182189|gb|ADC89433.1| efflux transporter, RND family, MFP subunit [Thermocrinis albus DSM
           14484]
          Length = 371

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 70/208 (33%), Gaps = 19/208 (9%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +    Q +  +Q     ++ L+L +  +E+   L     +  +   +           ++
Sbjct: 108 QALDRQIEQAKQAYKAAQAQLDLAQRTYERYQKLLQEGAVTQQEFDQVKAQYDSAKAQVQ 167

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q          +   +        + +P +G +   +     + A   QPL+ +      
Sbjct: 168 QALAGIEALRFQKQSVASNFSYTDLRAPFSGCVSNKRVD-VGDIAAPGQPLLTL--EKAP 224

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +   +  K + ++K G T  V    Y +   K+ +  + ++   +     +      +
Sbjct: 225 YQVEVFLPEKYVGNIKVGQTLKV----YVEALGKELEGKVVELSSALDPITRS------F 274

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLF 415
           +V L I           LR+G  A+VL 
Sbjct: 275 KVKLDIPYQE------GLRSGMYAKVLI 296



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 44/125 (35%), Gaps = 3/125 (2%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +G ++      EI S   G +    V+ G  +  GT L+  +  +    +      I+  
Sbjct: 59  TGNVVASTTA-EISSRVMGRVLAVNVKEGDCVKAGTLLVKIDASDVASQVQALDRQIEQA 117

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFE--SREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           +      ++ LD     Y+  +K  +  +  +Q  D +   + +        ++ +    
Sbjct: 118 KQAYKAAQAQLDLAQRTYERYQKLLQEGAVTQQEFDQVKAQYDSAKAQVQQALAGIEALR 177

Query: 165 KMKLT 169
             K +
Sbjct: 178 FQKQS 182


>gi|265999458|ref|ZP_05466478.2| HlyD family secretion protein [Brucella melitensis bv. 2 str. 63/9]
 gi|263094090|gb|EEZ18012.1| HlyD family secretion protein [Brucella melitensis bv. 2 str. 63/9]
 gi|326409081|gb|ADZ66146.1| secretion protein HlyD family protein [Brucella melitensis M28]
 gi|326538787|gb|ADZ87002.1| secretion protein HlyD family protein [Brucella melitensis M5-90]
          Length = 319

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 75/228 (32%), Gaps = 20/228 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L     ++  + L         +  +  ++  Q+    +  
Sbjct: 40  LFEIDPQPFQIELDQAKANLAQASEKLAGLVLTYKQQLASVAQAKDDVTFAQEQFNRVSA 99

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      ++   +Q ER +  +  E           L  +    D+   + A+YL     
Sbjct: 100 LVHDKFEARAQFDQAERALQVAKQEQNAAASAAAATLAQLGGTLDKPLQQHASYLA---- 155

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +++ + E+      +L+P AGT+   ++    ++     P   ++  
Sbjct: 156 -----------AKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFLAVGDPAFTLI-- 202

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               ++ + +    + H+K G  ATV    Y D      +  ++ I P
Sbjct: 203 GADAWVNSNIKETDLTHIKVGDPATVVLDSYLDQ---PLQGEVQSITP 247


>gi|258540573|ref|YP_003175072.1| bacteriocin ABC transporter permease [Lactobacillus rhamnosus Lc
           705]
 gi|257152249|emb|CAR91221.1| ABC transporter, bacteriocin transporter permease protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 271

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 84/282 (29%), Gaps = 27/282 (9%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           S              R     L +     +   D E +++L R  L+  Q  L   +   
Sbjct: 5   SEAKAAIQANKPLASRHAYHYLYQQYESEIKNTDAEAQANLKRQYLAQLQTQLDEEQTNL 64

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
                      +Q+R   K      +   E +  L  +     +              + 
Sbjct: 65  TS--------LEQQRAGQKQADVSAQKAGETQANLTALQSRLQQT----------AVAEQ 106

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH-S 325
            + Q+    + +KL  L    +   + +  +G +    + + + Y      L +I+P  +
Sbjct: 107 TKVQQQVQADEAKLATLNDETQNYHVKASASGVLHLETALAGNQYVPSGSVLARILPDLT 166

Query: 326 KLTYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           + T    K  V+P +I  +K+G    +R     ++       +  ++  I      + + 
Sbjct: 167 EQTVADIKLGVSPTEIMSIKRGQKVRLRIA--ENVPTPTI--LDGRVYAIDVAPTRDPKV 222

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
             ++ V  ++           L  G   +        T    
Sbjct: 223 GNFFTVKARV--KLSKSQRQSLYYGLAGQASVITGTKTYWDY 262


>gi|307545942|ref|YP_003898421.1| secretion protein HlyD [Halomonas elongata DSM 2581]
 gi|307217966|emb|CBV43236.1| secretion protein HlyD family protein [Halomonas elongata DSM 2581]
          Length = 288

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 71/218 (32%), Gaps = 30/218 (13%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q  L + + +V +   EL  + HE     R   +     + E A     ++         
Sbjct: 81  QAALEKAKAVVQQRQAELELSQHEASRRNRLSRQAISAESQETAQINSRVAS------AQ 134

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                S L   +   E+ T+ +P AG ++  Q  +  NY     P+M +V      Y+  
Sbjct: 135 LGQAKSALNSAQIDLERTTVQAPAAGHVLNLQL-AEGNYVNTGTPVMALVKADS-FYVTG 192

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-------- 384
                +  H++ G  A V           + +  +  I   I+  + +   Q        
Sbjct: 193 YFEETKTPHIRVGDPARVILMSGD----VELEGHVASIGRGIADSNTSTDNQLLPQVQPT 248

Query: 385 -------EYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                  +   V +++ ++      + L  G  A V  
Sbjct: 249 FSWVRLAQRIPVRIELDEI---PEEVTLSAGMTATVRI 283



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 76/242 (31%), Gaps = 5/242 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + R    SL  + ++ +    GL  W     +    +  G +  +  V+ I    SG + 
Sbjct: 1   MMRTFLRSLVTLAIVVLAIAAGLWLWHYY--LYTPWTRDGRVRAD--VITIAPDVSGRVV 56

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              + +  Q+ +G  L   +D      ++  K  ++  +  ++  +      N       
Sbjct: 57  DLPITDNQQVAKGDLLFRIDDTRYQAALEKAKAVVQQRQAELELSQHEASRRNRLSRQAI 116

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            A      Q+   +       +K              ++      +   +L   N  +  
Sbjct: 117 SAESQETAQINSRVASAQLGQAKSALNSAQIDLERTTVQAPAAGHVLNLQLAEGNYVNTG 176

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS-TLELRENIHEQKNMLRHINEL 247
             +++  + D   +   FE+       +    R++  S  +EL  ++      +   N  
Sbjct: 177 TPVMALVKADSFYVTGYFEETKTPHIRVGDPARVILMSGDVELEGHVASIGRGIADSNTS 236

Query: 248 YD 249
            D
Sbjct: 237 TD 238


>gi|304390023|ref|ZP_07371977.1| possible membrane-fusion protein [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304326505|gb|EFL93749.1| possible membrane-fusion protein [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 695

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 60/409 (14%), Positives = 119/409 (29%), Gaps = 99/409 (24%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIET------------------TDLIDLKKVSIKNLRC 108
           ++   V+ G ++ +G  L   +  E                    + ID    + +N + 
Sbjct: 125 VQTLNVKPGDRVSRGQFLAQLDSSEAMSQLSSQQSQLNESRVTQQNSIDEAAQNYQNAKS 184

Query: 109 HIDT--------EKSALDFLNNKYDVLEKAFESREEQ--------LLDFLGKYHSTCSKV 152
            +D          ++AL    N+Y    +A++  +++        LLD      S   + 
Sbjct: 185 ALDQGLNQDIRGAQTALHEAQNEYVKASRAYDQMKQEKDNRTLQALLDQENALRSANQEA 244

Query: 153 FNYGISSVYR--SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM---KNLFE 207
            N  + +     ++    T+     + R   ++  +L R  L   +KD T+      L E
Sbjct: 245 ENARMEANRAGAAVADAKTQRDIAAIERDSAKDDLALARKELERIKKDPTLKADPNKLAE 304

Query: 208 KNAVSQNDLNQQ------------------------------------------ERIVYK 225
               ++  + +                                            R    
Sbjct: 305 LIEATKQRIAELMSEVNAKDQNADATEKAVKNAWSQQAQAKQAANHASENLGMARRQFRA 364

Query: 226 STLELRENIHEQKNMLRHINE-------LYDEANLEFANYLKEISRDLEQNQRTF----A 274
           +  ++   I +  + +              D A +  A  +    R L   Q T     A
Sbjct: 365 ALRQIDSQIADAGDAVAKAQTGVSDAKVALDSAKIHAAQEVNSNLRALRAAQATAGSGMA 424

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           +  S +  L        + SP+AG +    S ++   A     LM  V   +   I  ++
Sbjct: 425 EGQSAIQKLRADISSAHVTSPMAGIV---TSVTAKVGAAPEGSLMT-VEDDQNMVIETQI 480

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
               +  +  G   T   P   D   K+F   +  I P    Q      
Sbjct: 481 KESGVAKLNVGNQVTFTTPATGD---KEFTGTVAFISPAAVDQTAAPSG 526


>gi|238793928|ref|ZP_04637547.1| Multidrug resistance protein A [Yersinia intermedia ATCC 29909]
 gi|238726695|gb|EEQ18230.1| Multidrug resistance protein A [Yersinia intermedia ATCC 29909]
          Length = 391

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 90/262 (34%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +   +L +  LS  Q DL+    L   NA+ +
Sbjct: 99  EQAFEQAKTALANSVRQTHQLMINSKQYQANIALKKTELSKSQNDLSRRVVLGSANAIGR 158

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++      V  +   L   I +       +     E                   Q   
Sbjct: 159 EEVQHARDAVDAAQASLDVAIAQYNANQALVLNTPLE------------------KQPAV 200

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +KL     + ++  ++SP+ G +   +S           PLM ++P +   ++ A 
Sbjct: 201 EQAAAKLRDAWLSVQRTKVVSPVDGFVSR-RSVQVGAEIANGAPLMAVIPAN-QMWVDAN 258

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G +ATV    Y D     ++  +  +D          P  +   N ++ 
Sbjct: 259 FKETQLANMRIGQSATVITDFYGDNV--VYQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 316

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++ +   +++ + +
Sbjct: 317 VQRLPVRIELDNKQLAEHPLRI 338



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 72/206 (34%), Gaps = 18/206 (8%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSG 65
           K+     L    +  IIG+  LI W ++L      + +           N V+I S  SG
Sbjct: 19  KQRKHVLLLLTVIFIIIGVAYLIYWFLVLRHHQETDNAYI-------SGNQVQIMSQVSG 71

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFL 120
            +    VEN   +  G  LL  +  +     +  K ++ N      +  I++++   +  
Sbjct: 72  SVISVNVENTDLVKSGDVLLALDPTDAEQAFEQAKTALANSVRQTHQLMINSKQYQANIA 131

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR--MRSIYLNR 178
             K ++ +   +     +L           +     + +   SL + + +       +  
Sbjct: 132 LKKTELSKSQNDLSRRVVLGSANAIGREEVQHARDAVDAAQASLDVAIAQYNANQALVLN 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKN 204
             LE + ++ +A        L++ + 
Sbjct: 192 TPLEKQPAVEQAAAKLRDAWLSVQRT 217


>gi|332665366|ref|YP_004448154.1| RND family efflux transporter MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332334180|gb|AEE51281.1| efflux transporter, RND family, MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 349

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 56/185 (30%), Gaps = 15/185 (8%)

Query: 201 MMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           + + L E+   V +  L         +  E+   + +    +         A   +A+ +
Sbjct: 74  IARILVEEGTHVRKGQLLA-----TLNLTEINAQVQQAAEAVAKSKRDLSRAKNLYADSV 128

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                 ++      +       I +  +    I SPI+G +V               P+ 
Sbjct: 129 A-TLEQVQDATTGLSVAEQSFQIAQYNQSYSEIRSPISGKVVKKLMN-QGEVVGPGTPVF 186

Query: 320 KIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            I+   +    I++ +  +    ++ G  A V    Y D         + K+  +    +
Sbjct: 187 YILGDGQADWVIKSGLVDRDWARLRLGDRAEVHLDAYPDRTF------VAKVSQLADVGN 240

Query: 379 NNLQT 383
               T
Sbjct: 241 PQSGT 245



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 34/91 (37%), Gaps = 1/91 (1%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-LDFLN 121
             G+I +  VE G+ + +G  L T    E    +     ++   +  +   K+   D + 
Sbjct: 70  TGGVIARILVEEGTHVRKGQLLATLNLTEINAQVQQAAEAVAKSKRDLSRAKNLYADSVA 129

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               V +        +    + +Y+ + S++
Sbjct: 130 TLEQVQDATTGLSVAEQSFQIAQYNQSYSEI 160


>gi|94314329|ref|YP_587538.1| hypothetical protein Rmet_5410 [Cupriavidus metallidurans CH34]
 gi|93358181|gb|ABF12269.1| putative membrane protein [Cupriavidus metallidurans CH34]
          Length = 449

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 60/165 (36%), Gaps = 18/165 (10%)

Query: 4   FMWKNLKRNHP-------ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV 56
           + W+ L R          +  +R+ + + + I+       L+P+  S  +  E+    ++
Sbjct: 163 YHWEMLARRERDVSWLWGSRTRRIAIAAAVLIL-------LMPVRQSALAPAEVT-SLDL 214

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             + +P  G++K+  V     +  G PL + +D   +  +++   ++      +   +  
Sbjct: 215 QMVSAPIEGVVKEVHVRPNQTVKAGQPLFSLDDTTLSHRLEVASQAVAVADAELLAARQN 274

Query: 117 L---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
               D    +   L+   E R  +L     +           G++
Sbjct: 275 AFRSDDSKAQLTTLQSRAEERRAELESIRSQLQRQTVVAPRDGVA 319



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 58/195 (29%), Gaps = 14/195 (7%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           E  +    + +    A  + A    +    L   Q    +  ++L  +    +++T+++P
Sbjct: 255 EVASQAVAVADAELLAARQNAFRSDDSKAQLTTLQSRAEERRAELESIRSQLQRQTVVAP 314

Query: 296 IAGTIVYNQSFS-SSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
             G  V+              + +M++  P      I   +       +  G   ++   
Sbjct: 315 RDGVAVFADINDWLGKPVVTGERIMQLANPDRPAMLI--HLPVADALTLDVGAPVSL--- 369

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
               +  +  + +  K+     Q          Y +   I +       I L+       
Sbjct: 370 ---FLTVRPLQPLSGKLIETSYQAALTPDGVPSYRLRADIENGDPQHARIGLK----GTA 422

Query: 414 LFTAKNTTLAQEIIH 428
                 + LA EI+ 
Sbjct: 423 RIKGGWSVLAYEILR 437


>gi|332707267|ref|ZP_08427320.1| hypothetical protein LYNGBM3L_34540 [Lyngbya majuscula 3L]
 gi|332354001|gb|EGJ33488.1| hypothetical protein LYNGBM3L_34540 [Lyngbya majuscula 3L]
          Length = 103

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 22/58 (37%)

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           I            QQ   + +I P      IRA++   +  ++KKG    ++F  Y  
Sbjct: 45  IFQLPIQRPGAVVQQGTMVAEIAPEDSSLIIRAQMATTESGYLKKGMPVKLKFDAYPF 102


>gi|325139000|gb|EGC61548.1| fatty acid resistance protein A [Neisseria meningitidis ES14902]
          Length = 390

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 109 NELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 168

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 169 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 211

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 212 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 269

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 270 MKIGQPAEL 278



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 60  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELIQAVRQNR 119

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 120 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 179

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 180 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRT 220


>gi|307728677|ref|YP_003905901.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1003]
 gi|307583212|gb|ADN56610.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1003]
          Length = 426

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 87/295 (29%), Gaps = 32/295 (10%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + Q++       +         ++     L   + R+  +Y N        +   
Sbjct: 86  AVNTDDTQIVKAGAPVVALDPADAKLALADAEAQLGQTVRRVSGLYANNGFYAANVAQRE 145

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L+  + DL   + + +  AVS                   E+I   ++ +       D
Sbjct: 146 ADLARARDDLRRRQAVADTGAVS------------------AEDIAHARDAVSVAQAALD 187

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A  +         R   +         +K+        + T+ +P+ G +   Q     
Sbjct: 188 AARQQGDANQALTDRTTVEQHPDVQAAAAKVRTAWLEYARDTLPAPVTGYVAQRQV-QVG 246

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  PLM IVP     ++ A     Q++H++ G   T+    Y      ++   IE 
Sbjct: 247 QRVAPGTPLMAIVPLDG-VWVDANFKEVQLKHMRIGQPVTLTSDVYGSSI--RYHGHIEG 303

Query: 370 IDPIISQQDNNLQTQ----------EYYEVILKITDLAFSDNNIELRNGFPAEVL 414
                      L  Q          +   V + +     + + + +      +V 
Sbjct: 304 FSAGTGSAFATLPAQNATGNWIKIVQRLPVRIALDPAELAAHPLRIGLSMVVDVD 358


>gi|194365414|ref|YP_002028024.1| RND family efflux transporter MFP subunit [Stenotrophomonas
           maltophilia R551-3]
 gi|194348218|gb|ACF51341.1| efflux transporter, RND family, MFP subunit [Stenotrophomonas
           maltophilia R551-3]
          Length = 383

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 72/205 (35%), Gaps = 21/205 (10%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E+       +   + +V       R  + + +  +R +   Y  A  +        + 
Sbjct: 94  LVEEG----QRVTAGQPLVRLDPDRARLAVAQSEAQMRKLENNYQRAQ-KLVGQQMVSAA 148

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           D++Q +    +  ++  +        T+++PI+G I      +  N+ Q + P+ +IV  
Sbjct: 149 DVDQLRYDLENVRAQYRLATLELSYTTVVAPISGVIASRSIKT-GNFVQINTPIFRIV-D 206

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +        V  +++  ++ G   T+       +  + F   +++I P++       +  
Sbjct: 207 NSRLEATLNVPERELATLRAGQPVTL---AADALPGQSFTGTVDRIAPVVDSGSGTFRVV 263

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
                       AF      L+ G 
Sbjct: 264 S-----------AFDGAAHALQPGM 277



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 51/159 (32%), Gaps = 2/159 (1%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  +        + +  SG+     VE G ++  G PL+  +       +   +  ++
Sbjct: 69  TGTAALEPRAESQVV-AKTSGVALAVLVEEGQRVTAGQPLVRLDPDRARLAVAQSEAQMR 127

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    +  +         +++     E     +               IS V  S 
Sbjct: 128 KLENNYQRAQKLVGQQMVSAADVDQLRYDLENVRAQYRLATLELSYTTVVAPISGVIASR 187

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +K      I      + +  S L A L+  +++L  ++
Sbjct: 188 SIKTGNFVQINTPIFRIVDN-SRLEATLNVPERELATLR 225


>gi|75676469|ref|YP_318890.1| secretion protein HlyD [Nitrobacter winogradskyi Nb-255]
 gi|74421339|gb|ABA05538.1| Secretion protein HlyD [Nitrobacter winogradskyi Nb-255]
          Length = 403

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 16/178 (8%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                ++ L  E   + A         ++Q Q  F    + +   E    QK + +P  G
Sbjct: 143 KAQATVSRLALERAKQLAARQVGPQVTVDQAQAAFDQANAGIAKTEAIISQKLVRAPFDG 202

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +      +     P++ +       +    VT K    +  G T  V    Y   
Sbjct: 203 -VLGVRQVEVGQFLNAGTPIVSLT-DLSTLFANFTVTEKDSARLAVGQTVRVSVDAYPGR 260

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              +F   I  I+P I+ +  N++ Q              ++ +  L+ G  A+V+  
Sbjct: 261 ---EFDGKITTIEPQIATETRNIRVQ-----------ATIANPDNILKPGMFADVIVV 304



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 40/126 (31%), Gaps = 3/126 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S  +G I +     GS++++G PL+   D      +   K      R  ++  K    
Sbjct: 102 VSSDVNGRITEILFTAGSRVVKGAPLVQLFDKPEQGDLASFKAQATVSRLALERAKQLAA 161

Query: 119 FLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                    D  + AF+     +            +    G+  V +    +     +  
Sbjct: 162 RQVGPQVTVDQAQAAFDQANAGIAKTEAIISQKLVRAPFDGVLGVRQVEVGQFLNAGTPI 221

Query: 176 LNRLDL 181
           ++  DL
Sbjct: 222 VSLTDL 227


>gi|302878971|ref|YP_003847535.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
 gi|302581760|gb|ADL55771.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
          Length = 395

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 76/230 (33%), Gaps = 29/230 (12%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELREN-----IHEQKNMLRHINELYDEA--NLEFANYLK 260
            NAV +  +   E      + +L+++     I      L   NE    +  N E+A+ L 
Sbjct: 82  NNAVEKGQVL-LELDNALLSAQLKQDMANVEIARASVELASANEARTRSLFNQEYASRL- 139

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQ---KTILSPIAGTIVYNQSFSSSNYAQQS-- 315
           E+   ++  +   +        +EK R       I SP++G ++  +S         S  
Sbjct: 140 ELDTAIQAKKAALSQMKLTQATVEKDRANLAYSVIRSPVSGVVID-RSVDVGQTVAASLQ 198

Query: 316 -QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              L KI        I +      I  ++ G T       Y +   +     + +++P  
Sbjct: 199 TPTLFKIAQDLSKMQINSSFAEADIGKIRVGQTVRFTVDAYPNRNFQG-SVRLIRLNPTT 257

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF-TAKNTTLA 423
            Q          Y+V++ + +         L  G  A V     +   + 
Sbjct: 258 VQNVVT------YDVVINVANPEQI-----LMPGMTAYVSIAVTERRNVL 296



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 74/187 (39%), Gaps = 6/187 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++G I     +V + +  SG +KK  V+  + + +G  LL  ++   +  +   
Sbjct: 48  ISQTVSANGTINPVT-LVNVGTQVSGTVKKLYVDFNNAVEKGQVLLELDNALLSAQLKQD 106

Query: 100 KVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             +++  R  ++     ++    L N+        ++  +     L +   T + V    
Sbjct: 107 MANVEIARASVELASANEARTRSLFNQEYASRLELDTAIQAKKAALSQMKLTQATVEKDR 166

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNAVSQN 214
            +  Y  ++  ++ +       +     +SL    L    +DL+ M+  + F +  + + 
Sbjct: 167 ANLAYSVIRSPVSGVVIDRSVDVGQTVAASLQTPTLFKIAQDLSKMQINSSFAEADIGKI 226

Query: 215 DLNQQER 221
            + Q  R
Sbjct: 227 RVGQTVR 233


>gi|218259442|ref|ZP_03475174.1| hypothetical protein PRABACTJOHN_00832 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225096|gb|EEC97746.1| hypothetical protein PRABACTJOHN_00832 [Parabacteroides johnsonii
           DSM 18315]
          Length = 410

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 78/222 (35%), Gaps = 19/222 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI--NELYDEANLEFANYLKEISRDL 266
             +++ D    +  +  +  +L  +  E +   ++   N++  E  L   +  +  + + 
Sbjct: 85  QLIAEMDKVNLKAELASAEAQLASSKSEYEYQQKNYARNKILFEKKLISDSDYETSTYNY 144

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ +  +    + +  + +  E  TI SPI G +V N++               L  I  
Sbjct: 145 EKAKAAYEQNQAAMVKVNRNLEYATITSPIDG-VVINRAVEEGQTVAAGFETPTLFTIAA 203

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQD 378
                 + A V    I +V+ G   +     Y +     F+  + +I     +   S   
Sbjct: 204 DLTKMQVIADVDEADIGNVENGQRVSFTVDAYPND---VFEGTVMQIRLGDSESTSSSSS 260

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +  T   YEV++        + +++L+    A V       
Sbjct: 261 TSTSTVVTYEVVISAD-----NPDLKLKPRLTANVTIFTLER 297



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/114 (11%), Positives = 38/114 (33%), Gaps = 18/114 (15%)

Query: 18  KRMTLLSIIGIIGLITWSILLP-----------------IEISVSSSGEILNEDNVVEIK 60
           K +  +  + ++    W                      I  +V+++G +     V E+ 
Sbjct: 5   KLIIGIVGVLVVAGGIWFFTGKTSKGGIQLETAKVGRSSISNTVTATGTVEPVTEV-EVG 63

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           +  SGII K   +    +  G  +   + +     +   +  + + +   + ++
Sbjct: 64  TQVSGIIDKLYADYNDVVKAGQLIAEMDKVNLKAELASAEAQLASSKSEYEYQQ 117


>gi|304315977|ref|YP_003851122.1| efflux transporter RND family, MFP subunit [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777479|gb|ADL68038.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 540

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 52/175 (29%), Gaps = 16/175 (9%)

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +        +E  N  +++   L   +       +       T  ++ I+S  +G +  
Sbjct: 34  KVKAGELLYQIEDDNLNQQLQDALINLELAQEQLDNDTKSYNDTISKQKIISSYSGIVDS 93

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                          +  I        I+      QI ++K G +A V    Y       
Sbjct: 94  INV-KVGQNVNPGTAIAVIT-DYSNASIKVPFNGSQINNIKVGQSADV----YLYNSYTT 147

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            K I+      +S Q   +    YY V + + +         L +G  A+V    
Sbjct: 148 VKGIVT----DVSTQAIPVNGASYYYVTVSLPNPG------ALTDGMTAQVTVHT 192



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 54/445 (12%), Positives = 134/445 (30%), Gaps = 88/445 (19%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
            +G +  +  V+ +K   +G +KK   + G ++  G  L   ED      +    ++++ 
Sbjct: 5   GTGNLDADKRVITLK--GNGTVKKVYHKVGDKVKAGELLYQIEDDNLNQQLQDALINLEL 62

Query: 106 LRCHIDTE-KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS- 163
            +  +D + KS  D ++ +  +   +       +         T   V     ++  +  
Sbjct: 63  AQEQLDNDTKSYNDTISKQKIISSYSGIVDSINVKVGQNVNPGTAIAVITDYSNASIKVP 122

Query: 164 -LKMKLTRMRSIYLNRLDLENKSSLLRALLS---------SHQKDLTMMKNL-----FEK 208
               ++  ++      + L N  + ++ +++         +      +  +L        
Sbjct: 123 FNGSQINNIKVGQSADVYLYNSYTTVKGIVTDVSTQAIPVNGASYYYVTVSLPNPGALTD 182

Query: 209 NAVSQNDL---NQQERIVYKSTLELREN---IHEQKNMLRHINELYDE---ANLEFANYL 259
              +Q  +      ER +   TL ++ +       +  +  IN    +   A    A   
Sbjct: 183 GMTAQVTVHTNIGDERAIQNGTLSVKNSNTVTASIQGTIASINVKEGQKVSAGTLIATLT 242

Query: 260 KEISR-DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            +++   ++ +        S    ++       I +PI G I+            +   L
Sbjct: 243 SDVNDIQIKNDNLKLQQAQSNYDNIQSQINSLNIYAPIDGVIISQN-------INEGDEL 295

Query: 319 ----------------------------------------MKIVPHSKLTYIRAKVTPKQ 338
                                                     IV ++    +   +    
Sbjct: 296 SGQSSSNYSSNASSGGNSNTSNSSNTSVSSLSSITNQSDTAVIV-NNNNYSVDVPIDETD 354

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  +K G  AT+      D++ + F+  + +I  I + Q+N       Y+V + +     
Sbjct: 355 ISKIKIGQKATL---TTDDLQGETFEGTVTEISSIPTIQNNVAS----YDVTVSLPYTDK 407

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLA 423
                         ++   K  TL 
Sbjct: 408 LKLGQT----MNVSIIVAQKENTLL 428



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 1/81 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +     +G +  + N   + +   G I    V+ G ++  GT + T         I    
Sbjct: 196 DERAIQNGTLSVK-NSNTVTASIQGTIASINVKEGQKVSAGTLIATLTSDVNDIQIKNDN 254

Query: 101 VSIKNLRCHIDTEKSALDFLN 121
           + ++  + + D  +S ++ LN
Sbjct: 255 LKLQQAQSNYDNIQSQINSLN 275


>gi|303232634|ref|ZP_07319319.1| efflux transporter, RND family, MFP subunit [Atopobium vaginae
           PB189-T1-4]
 gi|302481120|gb|EFL44195.1| efflux transporter, RND family, MFP subunit [Atopobium vaginae
           PB189-T1-4]
          Length = 500

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 106/305 (34%), Gaps = 21/305 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +L +A +  + Q   F+ K + T +        +V  +      +     +   +     
Sbjct: 139 LLSQASKPHQTQQTAFVTKQNFTATIKAQGQAQAVSSTYITPEIQGIVDKVYVTEGSQVK 198

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                    +Q+    ++   ++ AV++  L   +    ++       +    +      
Sbjct: 199 KGDTLFTIKNQEIDDAIEAANDQLAVAKKQLASAKDGKVRAQAAYDTALKAYNSAKTQQE 258

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +            +   S   +Q Q    +   +L   ++   ++T+ SPI+G+++    
Sbjct: 259 QAALPHPDTVFEQVVSASNACDQAQLQVKNAQKQLDKAKEHAAKRTVTSPISGSVLTLGV 318

Query: 306 ----FSSSNYAQQSQP----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
                ++    Q S P    LM+I        +R  V+   I H++ G  A+V F     
Sbjct: 319 KQGASTAMGAGQNSMPGASQLMQIA-DISKMRVRVAVSELDISHIEVGQPASVTFNALEH 377

Query: 358 IREKKFKAIIEKIDPIIS----QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           ++     A +E I            N+ ++   Y V + IT+   +     +R G  +EV
Sbjct: 378 VQ---CDATVENISNTTEVSAQPMPNDRESVAKYMVDVIITNPDPA-----IRVGMSSEV 429

Query: 414 LFTAK 418
             T K
Sbjct: 430 TITTK 434



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 77/239 (32%), Gaps = 23/239 (9%)

Query: 47  SGEILNEDNVVEIKS----PF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           +  I  +     + S    P   GI+ K  V  GSQ+ +G  L T ++ E  D I+    
Sbjct: 161 TATIKAQGQAQAVSSTYITPEIQGIVDKVYVTEGSQVKKGDTLFTIKNQEIDDAIEAAND 220

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +   +  + + K         YD   KA+ S + Q       +  T  +      ++  
Sbjct: 221 QLAVAKKQLASAKDGKVRAQAAYDTALKAYNSAKTQQEQAALPHPDTVFEQVVSASNACD 280

Query: 162 RSLKMKLTRMRSIYLNRLDLENK---------------SSLLRALLSSHQKDLTMMKNLF 206
           ++        + +   +     +                      + + Q  +     L 
Sbjct: 281 QAQLQVKNAQKQLDKAKEHAAKRTVTSPISGSVLTLGVKQGASTAMGAGQNSMPGASQLM 340

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           +   +S+  +      +  S +E+ +      N L H+     +A +E  +   E+S  
Sbjct: 341 QIADISKMRVRVAVSELDISHIEVGQPASVTFNALEHVQ---CDATVENISNTTEVSAQ 396


>gi|153953282|ref|YP_001394047.1| EmrA-related transporter protein [Clostridium kluyveri DSM 555]
 gi|219853915|ref|YP_002471037.1| hypothetical protein CKR_0572 [Clostridium kluyveri NBRC 12016]
 gi|146346163|gb|EDK32699.1| EmrA-related transporter protein [Clostridium kluyveri DSM 555]
 gi|219567639|dbj|BAH05623.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 217

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 61/168 (36%), Gaps = 5/168 (2%)

Query: 254 EFANYLKEISRDLEQN--QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           + +  L E++ +      +         + + + + ++  I SPI G ++  Q  +    
Sbjct: 52  QISGKLLELNIEEGDTVIKNQILARQEMVNLPDSSVDESLIRSPIDGIVIKKQG-TIGEI 110

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               Q L  ++      YI A +   ++  V+ G + T+    Y   +       + +  
Sbjct: 111 WSSGQTLATLI-DPDKLYITANIEETKLGKVRIGQSVTITIDQYGSKKFTGKVKSVGEAS 169

Query: 372 PIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAK 418
                   +  +  + +V+ +I   ++ +  N ++  G  A V    K
Sbjct: 170 QSALSILPSSTSGTFTKVVQRIPVKISINKFNNKILPGTNAVVKIHVK 217


>gi|87300593|ref|ZP_01083435.1| possible ABC transporter component [Synechococcus sp. WH 5701]
 gi|87284464|gb|EAQ76416.1| possible ABC transporter component [Synechococcus sp. WH 5701]
          Length = 300

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 70/208 (33%), Gaps = 21/208 (10%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQ----------ERIVYKS 226
           RL+L  ++  L   +++      +++ L ++   V +  L  Q           R++   
Sbjct: 63  RLELAGETRKLAGPVTAAGNSPRLIQLLVKEGEFVERGQLLAQFDTGPALQAERRLLQSR 122

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L       +  +     L     L  A+ L E  + L + Q   ++    +T  +  
Sbjct: 123 YASLSRQAGSLEAEVDRYRPLVQAGALARADLL-EREQQLVELQAGVSETRQAITRTDAD 181

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQHVKK 344
                + +P+AG ++   +       +    +M I+    S      A+V    +  +  
Sbjct: 182 LGNSELRAPVAGKVMRLYAR-VGE--RPG--VMGILELSTSDRLEAVAEVADSDLARIHL 236

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDP 372
           G  A  R    +        A + ++ P
Sbjct: 237 GQAA--RINSLSGAFPGTLSARVSRVSP 262



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 61/218 (27%), Gaps = 15/218 (6%)

Query: 69  KFQVENGSQILQGTPLLTFEDIET----TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           +  V+ G  + +G  L  F+          L+  +  S+      ++ E      L    
Sbjct: 88  QLLVKEGEFVERGQLLAQFDTGPALQAERRLLQSRYASLSRQAGSLEAEVDRYRPLVQAG 147

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +       RE+QL++       T   +           L+  +         R+     
Sbjct: 148 ALARADLLEREQQLVELQAGVSETRQAITRTDADLGNSELRAPVAGKVMRLYARVGERPG 207

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              +  L +S + +           AV++   +   RI       +          L   
Sbjct: 208 VMGILELSTSDRLE-----------AVAEVADSDLARIHLGQAARINSLSGAFPGTLSAR 256

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                 A+    + + E+  DL         +++ L  
Sbjct: 257 VSRVSPADGARGDGVVEVRLDLAPADARRVRKLAGLRT 294


>gi|330963170|gb|EGH63430.1| hypothetical protein PSYAC_00670 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 440

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 68/196 (34%), Gaps = 13/196 (6%)

Query: 5   MWKNLKRNHPASLK----RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
            W  L+   P  L+    R  LL ++ +  L+      P+  SV +  E++     V   
Sbjct: 158 AWLALQPGKPWRLRFNRKRQVLLVMLALSCLLI-----PVRQSVLAPAEVVPLGGRVVAA 212

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--- 117
               G++ +F V+    +  G  LL FE+       D+ + ++      +          
Sbjct: 213 PLD-GVVAEFLVKPNQAVKTGDLLLRFENTTLKAQADVAERALGVAEAELKANSQRSFAD 271

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
              +++ D+L    E +  +          +  +    GI+    + +     +++    
Sbjct: 272 AESSSRIDLLAARVEQKRAERDYARELLKRSEVRAERDGIAVFADAQRWLGKPVQTGERL 331

Query: 178 RLDLENKSSLLRALLS 193
               +   + LR  L+
Sbjct: 332 LEIADPSQAELRIELA 347



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/118 (12%), Positives = 38/118 (32%), Gaps = 9/118 (7%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L + E    K+  ++ E           + E   +AN + +    E S  ++        
Sbjct: 235 LLRFENTTLKAQADVAER-------ALGVAEAELKANSQRSFADAESSSRIDLLAARVEQ 287

Query: 276 EMSKLTILEKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIR 331
           + ++     +  ++  + +   G  +  +         Q  + L++I  P      I 
Sbjct: 288 KRAERDYARELLKRSEVRAERDGIAVFADAQRWLGKPVQTGERLLEIADPSQAELRIE 345


>gi|310817957|ref|YP_003950315.1| secretion family protein HlyD [Stigmatella aurantiaca DW4/3-1]
 gi|309391029|gb|ADO68488.1| Secretion protein, family HlyD [Stigmatella aurantiaca DW4/3-1]
          Length = 371

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 62/200 (31%), Gaps = 19/200 (9%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +  S+   +    E    L  +  +  +     A    +   +LE  Q       + +T
Sbjct: 95  QLDNSSEAAQLKGAEADAELARLTHVRVQT---LATQGSKPQAELESAQARVVQAEAAVT 151

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
            L     +K I +P  G I   +            P+  +       ++   +  + +  
Sbjct: 152 NLRALIAKKVIRAPFDGRI-GIRQVELGQVLAPGGPIASLH-TMDPIHVEFLLPQQALAE 209

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           VK G    V    +       ++  +  I+P +     N        V ++ T     + 
Sbjct: 210 VKPGQKVRVHVDVFPKDT---WEGELTTINPEVEISSRN--------VRMRAT---VPNA 255

Query: 402 NIELRNGFPAEVLFTAKNTT 421
           +  L  G  A +   ++N +
Sbjct: 256 DGRLIPGMFANIDVLSENKS 275



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 43/127 (33%), Gaps = 1/127 (0%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            + G ++    V  + +  SGI++    ENG+++ +G  L+  ++      +   +   +
Sbjct: 55  RAVGTVIAVRGV-TLGAEVSGIVRDIGFENGARVKKGQVLVQLDNSSEAAQLKGAEADAE 113

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             R      ++     +     LE A     +              KV            
Sbjct: 114 LARLTHVRVQTLATQGSKPQAELESAQARVVQAEAAVTNLRALIAKKVIRAPFDGRIGIR 173

Query: 165 KMKLTRM 171
           +++L ++
Sbjct: 174 QVELGQV 180


>gi|87302252|ref|ZP_01085077.1| hypothetical protein WH5701_08624 [Synechococcus sp. WH 5701]
 gi|87283177|gb|EAQ75133.1| hypothetical protein WH5701_08624 [Synechococcus sp. WH 5701]
          Length = 330

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 64/191 (33%), Gaps = 11/191 (5%)

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           + L +++   +     +  L +Q   V K  L L  +  +QK  + ++        L + 
Sbjct: 22  EALDLVQLSAQAGGRIEQILVRQGSQVRKGDLLLVLDQEQQKADVINLRAKAATDQLNYE 81

Query: 257 NYLKEISR------DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            Y   + +        +Q ++        L   E     + + +PI+G +   Q     +
Sbjct: 82  RYESLVRQGAASPIQRDQFRQESIASREALIAREADLRFRNLRAPISGIVADLQV-KQGD 140

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                 P  K+V  +    +R ++     + V+ G      F              ++ I
Sbjct: 141 VITSGDPFTKLV-RNDRLMVRIEIPVVYAERVRIGQPV---FLSDPATDRPLANGRVKSI 196

Query: 371 DPIISQQDNNL 381
           DP++      L
Sbjct: 197 DPVVGDGSQTL 207



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 36/105 (34%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I++  V  GSQ+ +G  LL  +  +    +   +      + + +  +S +      
Sbjct: 34  GGRIEQILVRQGSQVRKGDLLLVLDQEQQKADVINLRAKAATDQLNYERYESLVRQGAAS 93

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
               ++  +         + +      +     IS +   L++K 
Sbjct: 94  PIQRDQFRQESIASREALIAREADLRFRNLRAPISGIVADLQVKQ 138


>gi|167624373|ref|YP_001674667.1| multidrug resistance efflux pump-like protein [Shewanella
           halifaxensis HAW-EB4]
 gi|167354395|gb|ABZ77008.1| Multidrug resistance efflux pump-like protein [Shewanella
           halifaxensis HAW-EB4]
          Length = 377

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 54/340 (15%), Positives = 115/340 (33%), Gaps = 27/340 (7%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                   +I   +   DT  +A   L NK D++      +   ++             +
Sbjct: 46  ASTSTNSQAIAANQVVDDTSATASLTLLNKADLMPLLLTGQVASVVS-QPFVVPKAGDTW 104

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR-ALLSSHQKDLTMMKNLFEKNAVS 212
            Y I  +     +       +  ++ +++N+   L  +LL    ++ +    L  +   +
Sbjct: 105 RYQIQWMLPEGSLAKPGQVVVIFDKSEIDNRIEQLEGSLLRVTAQEQSQSIELNAQLLQA 164

Query: 213 QNDLNQQERIVYKSTLELR---ENIHEQKNMLRHINELYDEANL-EFANYLKEISRDLEQ 268
           + +L Q +  + K+ L+     + I  +       N+L  E+ L +    L EI      
Sbjct: 165 KFELKQAKLELEKAELDAAIPADFIAAKDYADNQFNQLKAESELSKKHQALAEILDKRTA 224

Query: 269 NQRTFADEMSK----LTILEKTREQKTILSPIAGTIVY------NQSFSSSNYAQQSQPL 318
           +    A +  +    L+      EQ  + + IAG ++Y      ++ +S  + AQ  + +
Sbjct: 225 SLSQLAIDKKRAELELSQALSGLEQLELRADIAGPMLYSRDPWSDKKYSVGDNAQIGRQV 284

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             I P      + A V    +  +  G    +R       +       I  I     +Q 
Sbjct: 285 ANI-PALDDLEVIAWVNEVDVDRISIGEPVRLRLDS--QSKT-TLNGSINDISRQARKQP 340

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
               +  +     KI+     D+ +E+  G    VL    
Sbjct: 341 AWGNSNWF-----KISIKFVVDDRVEIIPGM--SVLVETG 373


>gi|126725485|ref|ZP_01741327.1| hypothetical protein RB2150_04753 [Rhodobacterales bacterium
           HTCC2150]
 gi|126704689|gb|EBA03780.1| hypothetical protein RB2150_04753 [Rhodobacterales bacterium
           HTCC2150]
          Length = 436

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 50/328 (15%), Positives = 101/328 (30%), Gaps = 29/328 (8%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           GE+     +  ++ P +  + +  V+ G  + +G  L        T   +    ++  LR
Sbjct: 39  GEMRPNFQISTVELPANSQLSRVFVKEGDVVKKGDILFQLNYTALTQESERLNRTLLGLR 98

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK-VFNYGISSVYRSLKM 166
                 +  L +  N +          + +LLD      +   + VF+   S        
Sbjct: 99  LQ---RQCLLKWPKNPFT---------KAELLDRRKSLRNPEDQFVFDAASSECQTEGAG 146

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                 S       LE +  LL+  LS       + K      A SQ+ L+         
Sbjct: 147 FERGSLSHNETMKKLEKRIYLLKKKLSLLTNSPDLAK------ATSQSKLS---LAYEAL 197

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           ++ L +NI E       I++ + E      +     + ++       AD  S LT     
Sbjct: 198 SVALAQNITELTR--STIDDKHAETLKTQKSEKFSRAMEIHGTIENIADTQSLLT---NF 252

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-VPHSKLTYIRAKVTPKQIQHVKKG 345
                I + I G +   +    +       PL+ + V       +   +   +  +++ G
Sbjct: 253 LAHPEIRAEIDGQVARVRDDQLNGQYAAGVPLIDLRVIEENDFRVTFAIPATEAGNLRIG 312

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPI 373
               +        +    K  +  I   
Sbjct: 313 KLVEI-VTIGLSKQSPLLKGHVTDISTT 339


>gi|225869038|ref|YP_002744986.1| transport protein ComB [Streptococcus equi subsp. zooepidemicus]
 gi|225702314|emb|CAX00114.1| transport protein ComB [Streptococcus equi subsp. zooepidemicus]
          Length = 455

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 57/421 (13%), Positives = 144/421 (34%), Gaps = 48/421 (11%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
              EIS+  +  +     +  I+S  +  I    +++   +  G  L+ ++  +     +
Sbjct: 41  AKKEISIILTATVEPNIILSNIQSTSNNTILTNNLKDNKYVKFGDLLIKYDSRKEGIQQE 100

Query: 98  LKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  + NL   +  ++  K++++  N+++   EK      +  +D+L + ++  + V  
Sbjct: 101 TYQTQLNNLQIQKEQLELLKASIEAGNSQFP--EKDNYGYYQTFIDYLNQINTLSANVNQ 158

Query: 155 Y------GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL---------LSSHQKDL 199
                    ++           ++ +     D ++  S ++            S ++  L
Sbjct: 159 QNENVSSQNTAASNQQVEIENAIKGLTSQISDYQSVRSAIQNGTVVDLDNRAYSIYRSYL 218

Query: 200 TMMKNLFEK--------NAVSQND--LNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           T   +L +           V+Q D  +NQ E  V    ++   +         + + L  
Sbjct: 219 TQTSSLVDNTDKTAVINQFVAQIDSQINQLESSVAGYRIQHAGS----GVQQSYSSTLES 274

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +     A  + ++ ++L        +      + + T  + +I++   G +  NQ F  +
Sbjct: 275 QLASLKAQSITKVEQELSALSNQITELEGTNKLQKNTSSKTSIVANEDGVLHLNQEFIGA 334

Query: 310 NYAQQSQPLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKA 365
           N   +     ++ P      +  I   +   +I  +  G TA  RF    D         
Sbjct: 335 NIVPEGTIFAQVYPEMKKGTVVKITGYLPSTEISSISIGDTA--RFSTKDDNGETLDLIV 392

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN-GFPAEVLFTAKNTTLAQ 424
            +  ID   ++  N      Y++V    + L   +   +L   G   + +      +   
Sbjct: 393 KLSSIDNAATKTKNG----NYFKVE---SKLQLKEKEAQLLKYGLEGKFILITGTKSYLN 445

Query: 425 E 425
            
Sbjct: 446 Y 446


>gi|209965853|ref|YP_002298768.1| HlyD family secretion protein [Rhodospirillum centenum SW]
 gi|209959319|gb|ACI99955.1| HlyD family secretion protein [Rhodospirillum centenum SW]
          Length = 287

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 73/229 (31%), Gaps = 22/229 (9%)

Query: 204 NLFEKNAVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            + +   V + D+       +    V  +  +L     E               N+    
Sbjct: 62  PVADNQYVRRGDILYEIDPERLRLAVALAEADLEARRQEMIVSQATARRRSQLRNVVSQE 121

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L++ S         +   ++ L +      + TI SP+ G +   +     +YA     
Sbjct: 122 ALQQSSGAAAVAGAAYQAAVAALDLARLDLARSTIRSPVDGYVTNLRLR-PGDYATAGTT 180

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID------ 371
            + I+  +   +I       +I  ++ G  A +    +        ++I   I+      
Sbjct: 181 RVAIL-AASSFWITGYFEETKIHMIRVGSPARIMLMGFDRPVTGHVESIGRGIENSNDAP 239

Query: 372 -----PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                P ++   + ++  +   V + I  +    +++EL  G  A V  
Sbjct: 240 GHLGLPDVAATFSWVRLAQRIPVRIHIDQM---PSDVELAAGMTATVEI 285



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 37/112 (33%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V++I    SG I+   V +   + +G  L   +       + L +  ++  R  + 
Sbjct: 43  VGADVIQIAPEVSGTIRSVPVADNQYVRRGDILYEIDPERLRLAVALAEADLEARRQEMI 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             ++     +   +V+ +    +        G  +       +     + RS
Sbjct: 103 VSQATARRRSQLRNVVSQEALQQSSGAAAVAGAAYQAAVAALDLARLDLARS 154


>gi|197335031|ref|YP_002155737.1| secretion protein HlyD family protein [Vibrio fischeri MJ11]
 gi|197316521|gb|ACH65968.1| secretion protein HlyD family protein [Vibrio fischeri MJ11]
          Length = 375

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 73/238 (30%), Gaps = 24/238 (10%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +  QL+             +   +    +SL++    + +        + + +     L 
Sbjct: 81  QPNQLIKEGDVLAKLNPVDYEIALKQAEQSLEIAGQNVGAQTAVIASSQARLTSANVELE 140

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + +     +  + E+  VS+ D ++    +  +   +     + +   + +     E   
Sbjct: 141 NTRLQSNRILEMAERGVVSKADADKARAALATAKANVVNAQADLEKSKKQLGADGVEN-- 198

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                                  +  L   +   E+  I +P  G +  N S S   YA 
Sbjct: 199 -----------------SQIKAALLALEQAQINLERTEIKAPTDGGV-SNFSLSEGFYAS 240

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
             QP+M  V  ++  +I A      + +++ G    +          K  +  +  +D
Sbjct: 241 AGQPIMTFV-STESIWIEAYFRENSLGNIQPGDKVEI---ALDFAPGKVIQGTVSSVD 294



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 71/199 (35%), Gaps = 18/199 (9%)

Query: 17  LKRMTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           ++++T   +I +  L+ +SI+     P+  +    G ++       IK   SG +    V
Sbjct: 27  VRKITNYLLITVAALLLFSIISDRIIPLTDNARVKGYVVP------IKPEVSGQVLDILV 80

Query: 73  ENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +    I +G  L     +       +    +++   ++      I + ++ L   N + +
Sbjct: 81  QPNQLIKEGDVLAKLNPVDYEIALKQAEQSLEIAGQNVGAQTAVIASSQARLTSANVELE 140

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
              +   +R  ++ +      +   K      ++    +  +    +S      D    S
Sbjct: 141 NT-RLQSNRILEMAERGVVSKADADKARAALATAKANVVNAQADLEKSKKQLGADGVENS 199

Query: 186 SLLRALLSSHQKDLTMMKN 204
            +  ALL+  Q  + + + 
Sbjct: 200 QIKAALLALEQAQINLERT 218


>gi|319406288|emb|CBI79925.1| Transport protein transmembrane [Bartonella sp. AR 15-3]
          Length = 334

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 92/304 (30%), Gaps = 24/304 (7%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD---------------- 180
           QL  F+     T + +    I+ +   +   +TR+      +++                
Sbjct: 29  QLPPFVSTLQKTDNALIKGNITLISPQISGIVTRVYVQDYQKVEKGMVLFELDDTLFRHQ 88

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L    ++L A  +     L  +K L ++    +  +   +++        +    ++   
Sbjct: 89  LVQAQAILEAKKAKLASVLLQIKLLEKEINTLRTKMVHSQKLSKNELSHPKNLNSQKALP 148

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           L   +    E     +   K++  + +  Q   A   + + + E       I+SP  G I
Sbjct: 149 LSSSSPDLSETFETKSQLQKKLEFEQQGLQSDIAGAKAGVEVAELNLAHTKIISPAVGHI 208

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR- 359
                     Y      L+ IVP     +I A     QI  ++ G           + + 
Sbjct: 209 GSVSV-QVGQYVVPGMRLVAIVPED--IWIIAHYKETQIADMRIGQPVVFYADALNNQKL 265

Query: 360 EKKF----KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +      A   +   + ++  N    +    + ++I      +   +L  G       
Sbjct: 266 TGRLVSFAPATRSEFSLLGTETANGNFIKIAQRISIRIAIDQEQEGIKKLIPGMSVVTYV 325

Query: 416 TAKN 419
              +
Sbjct: 326 DTAS 329



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 71/188 (37%), Gaps = 4/188 (2%)

Query: 20  MTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           +  LS +  I LI W+  L P   ++  +   L + N+  I    SGI+ +  V++  ++
Sbjct: 12  VAFLSGMMGIVLILWAWQLPPFVSTLQKTDNALIKGNITLISPQISGIVTRVYVQDYQKV 71

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE--- 135
            +G  L   +D      +   +  ++  +  + +    +  L  + + L       +   
Sbjct: 72  EKGMVLFELDDTLFRHQLVQAQAILEAKKAKLASVLLQIKLLEKEINTLRTKMVHSQKLS 131

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  L      +S  +   +     +  + + K    + +   +  L++  +  +A +   
Sbjct: 132 KNELSHPKNLNSQKALPLSSSSPDLSETFETKSQLQKKLEFEQQGLQSDIAGAKAGVEVA 191

Query: 196 QKDLTMMK 203
           + +L   K
Sbjct: 192 ELNLAHTK 199


>gi|293372968|ref|ZP_06619337.1| efflux transporter, RND family, MFP subunit [Bacteroides ovatus SD
           CMC 3f]
 gi|292632036|gb|EFF50645.1| efflux transporter, RND family, MFP subunit [Bacteroides ovatus SD
           CMC 3f]
          Length = 406

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 71/215 (33%), Gaps = 17/215 (7%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDL 266
             +++ D    +  +            E +   ++        E +L      ++   + 
Sbjct: 86  QLIAEMDRATLQSELASQQATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ + ++    + L   E+     TI SPI G ++  +   +            L  I  
Sbjct: 146 QKAKSSYDSSKASLAKAERNLAYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNN 380
                 + A V    I  V +G  A+     Y +     F+ ++ +I   D   +   + 
Sbjct: 205 DLTQMQVVADVDEADIGGVIEGQRASFTVDAYPND---VFEGVVTQIRLGDASSTSSTST 261

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             T   YEV++        + +++L+    A V  
Sbjct: 262 TTTVVTYEVVISAP-----NPDLKLKPRLTANVTI 291



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 67/186 (36%), Gaps = 4/186 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII K  V+  S + +G  +   +       +  +
Sbjct: 45  ISNSVTATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSVVTKGQLIAEMDRATLQSELASQ 103

Query: 100 KVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + +    +   + +K   +    L+ K  + +  FE            Y S+ + +    
Sbjct: 104 QATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNYQKAKSSYDSSKASLAKAE 163

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +  Y ++   +  +             S      L +   DLT M+ + + +      +
Sbjct: 164 RNLAYATITSPIDGVVISRDVEAGQTVASGFETPTLFTIAADLTQMQVVADVDEADIGGV 223

Query: 217 NQQERI 222
            + +R 
Sbjct: 224 IEGQRA 229


>gi|255066597|ref|ZP_05318452.1| macrolide-specific efflux protein MacA [Neisseria sicca ATCC 29256]
 gi|255049181|gb|EET44645.1| macrolide-specific efflux protein MacA [Neisseria sicca ATCC 29256]
          Length = 393

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 56/141 (39%), Gaps = 16/141 (11%)

Query: 18  KRMTLLSIIGIIGLITWSILLP---------------IEISVSSSGEILNEDNVVEIKSP 62
           K    +++  ++G   WS   P               I  +VS++GEI    N+V + + 
Sbjct: 7   KWTVGITVAAVLGFAAWSYFQPEPQTSYITETVKRGDISQTVSATGEISPS-NLVSVGAQ 65

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG IKK  V+ G Q+ +G  +         + ++ +K  ++  +  + + + AL+    
Sbjct: 66  ASGQIKKLYVKLGQQVKKGDLIAEINSTTQVNTLNTEKSKLETYQAKLVSAEIALNSAEK 125

Query: 123 KYDVLEKAFESREEQLLDFLG 143
           KY      ++       D   
Sbjct: 126 KYKREAALWKENATSKEDLES 146



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 81/262 (30%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 61  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQVNTLNTE--------KSKLETYQAK 112

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        N    E      + L     ++ + + +       +
Sbjct: 113 LVSAEIALNSAEKKYKREAALWKENATSKEDLESAKDALAAAKANVAELKASIKQTKISI 172

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
              E       I + + GT+V             Q +  ++++  +      + ++    
Sbjct: 173 NTAESELGYTRITATMDGTVVAIPVEEGQTVNAVQSTPTIIQLA-NLDTMLNKMQIAEGD 231

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--------YYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++       T          YY   
Sbjct: 232 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSLGSYTTSTDTTSNAIYYYAR 288

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             + +    D  + +  G   +
Sbjct: 289 ALVPNP---DGKLSI--GMTTQ 305


>gi|30022644|ref|NP_834275.1| multidrug resistance protein A [Bacillus cereus ATCC 14579]
 gi|228941747|ref|ZP_04104294.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228974671|ref|ZP_04135237.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|229081821|ref|ZP_04214313.1| multidrug resistance protein A [Bacillus cereus Rock4-2]
 gi|229180887|ref|ZP_04308222.1| multidrug resistance protein A [Bacillus cereus 172560W]
 gi|229192769|ref|ZP_04319727.1| multidrug resistance protein A [Bacillus cereus ATCC 10876]
 gi|29898202|gb|AAP11476.1| Multidrug resistance protein A [Bacillus cereus ATCC 14579]
 gi|228590608|gb|EEK48469.1| multidrug resistance protein A [Bacillus cereus ATCC 10876]
 gi|228602444|gb|EEK59930.1| multidrug resistance protein A [Bacillus cereus 172560W]
 gi|228701409|gb|EEL53903.1| multidrug resistance protein A [Bacillus cereus Rock4-2]
 gi|228785074|gb|EEM33087.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817959|gb|EEM64037.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 211

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 51  KLTDWKAEVGKNYNEN-----DKLGTVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 104

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 105 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LTGKVEQVGL 160

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 161 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 210


>gi|213963925|ref|ZP_03392171.1| putative HlyD family secretion protein [Capnocytophaga sputigena
           Capno]
 gi|213953434|gb|EEB64770.1| putative HlyD family secretion protein [Capnocytophaga sputigena
           Capno]
          Length = 309

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 54/292 (18%), Positives = 108/292 (36%), Gaps = 32/292 (10%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A+E  E + L    K      +V       V  ++     +  +       + ++  + +
Sbjct: 45  AYEVEEGKTLTEGQKVGQINVEVLKIQKEQVEATISSLKEKTLNPADQVALIRSQYEVQK 104

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L   +++LT ++ L    A +Q  L+    +V +   +L    ++ K  L +IN    
Sbjct: 105 AQLEQQERELTRVRQLVAGGAATQKQLDDLIALVDQLRKQLAVTQNQLKVSLTNINTQNR 164

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
               + A   K                      +++   Q  I++PI GT++ N +    
Sbjct: 165 NVLSQEAPLQKNAQ------------------AVQEQINQGEIINPIVGTVLVNYAL-KG 205

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                 +PL KI  ++ +  ++A +T  Q+  +K G   TVR         + ++  I  
Sbjct: 206 EMQTFGKPLYKIA-NTDVLTLKAYITGDQLTQIKLGQQVTVRTDA-GKGEYRTYQGEITH 263

Query: 370 IDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           I          +QT+       Y + +K+       N+  L+ G   EV+F 
Sbjct: 264 ISNKAEFTPKTIQTKSERANLVYAIKVKV------KNDGYLKIGMYGEVVFK 309


>gi|300312487|ref|YP_003776579.1| multidrug resistance transport transmembrane protein
           [Herbaspirillum seropedicae SmR1]
 gi|300075272|gb|ADJ64671.1| multidrug resistance transport transmembrane protein
           [Herbaspirillum seropedicae SmR1]
          Length = 397

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 55/206 (26%), Gaps = 17/206 (8%)

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF---ADEMSK 279
           +  S  E RE +    N                      +     Q ++         ++
Sbjct: 173 LAASGAETRERLTTLHNQQAQARSTVAARRAALDAAQLRVRSLQAQVRQAQAQGETAKAQ 232

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                       I + + G I   Q      +      +M +VP     Y+ A     QI
Sbjct: 233 YDAASVNLGYTEIRASVDGRIGDKQVR-VGQFVSPGTRMMTVVPT--RFYVSANFKETQI 289

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVIL 391
             ++ G  A ++      +   +F   +E + P        +  Q      T+    V +
Sbjct: 290 GIMRIGQPAIIKVDALPGV---EFHGHVESLSPGTGAQFSLLPPQNATGNFTKIVQRVPV 346

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTA 417
           ++   A  +       G    V    
Sbjct: 347 RVAIDATPEETRAFVAGLSVTVEVNT 372



 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
            + + V + S  SG + +  V +   +  G PL+  +
Sbjct: 74  VQADSVTVSSKVSGYVDQVLVADNQIVKAGQPLVRID 110


>gi|75907653|ref|YP_321949.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75701378|gb|ABA21054.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 361

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/390 (11%), Positives = 113/390 (28%), Gaps = 97/390 (24%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFED-IETT 93
            P+   V++ G I  E  V ++       S  I++  V++G ++  G  L   ++     
Sbjct: 53  TPVVQGVTALGRIEPEGEVRQVFPASTTESARIQRLLVKHGDKVKAGQVLAVLDNYARRL 112

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             + + +  ++  +  +    +                 +++  L     +     +++ 
Sbjct: 113 ATVKMAEEEVQVAQARLMQVNAG----------------AKQGDLQAQQAEIARLEAELH 156

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           N  I           +R R +Y       ++    R  + + Q+ +T             
Sbjct: 157 NAKIEE---------SRYRILYKEGAVSASQYDSKRLQMEAAQRYMT------------- 194

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
                 + +    T++++ +  E K     + +   E +L                    
Sbjct: 195 QAYAALKSLAEVRTVDVQLSQAEVKQAKAKVVQALAELDLSI------------------ 236

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                             + SP  G I+  Q+F         Q ++ +  ++    + A+
Sbjct: 237 ------------------VRSPQNGQILKVQAF-PGELVGT-QGIVSLG-NTTQMVVIAE 275

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQEYYE 388
           V    I+ +  G TAT+     +    K     + ++        +   D+         
Sbjct: 276 VYETDIRKIHLGQTATIT----SPSLTKPLSGKVSQVGLEIGTRNVLDTDSPTNVDT--- 328

Query: 389 VILKITDLAFSDNNIELRNGFP---AEVLF 415
             +    +     +     G      +V  
Sbjct: 329 -RVVEVKILLHQESSHRVAGMTNLKVDVSI 357


>gi|329851117|ref|ZP_08265874.1| efflux transporter, RND family, MFP subunit [Asticcacaulis
           biprosthecum C19]
 gi|328839963|gb|EGF89535.1| efflux transporter, RND family, MFP subunit [Asticcacaulis
           biprosthecum C19]
          Length = 364

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 70/225 (31%), Gaps = 24/225 (10%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           LT +  L ++ A     + Q + ++  + + L+  + + K      N+ YD AN  F   
Sbjct: 87  LTAVALLVDEGAF----VKQGQPLLRMNDVLLQAQLKQAKASFDQANKAYDRANTLFKQG 142

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
               +  L+  Q +     + +   +      T+ +P++G I    +            L
Sbjct: 143 YLSAAA-LDNAQASMLTTQAAMETAQTQLSLATVRAPVSGIITKRTAV-LGQVVSPGAEL 200

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            ++V       +  +V   ++  V+    ATV                +  + P +    
Sbjct: 201 FRMV-RDGRVELNLEVVETELALVRPNMAATV-----TSQSTGPVTGTVRIVTPQVDAAT 254

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
                       + +   +       LR G  A+    A      
Sbjct: 255 RLG------YARISVPWES------GLRPGMFAQGSIDAGTQPAL 287



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 57/185 (30%), Gaps = 3/185 (1%)

Query: 32  ITWSILLPIEISVSSSGEILNED-NVVEIKSPFSGIIK-KFQVENGSQILQGTPLLTFED 89
           ++++++  +   ++ +G         V + +   G+      V+ G+ + QG PLL   D
Sbjct: 52  VSYAVVGQVSAPITITGSGTVSAWQEVPVAAETGGLTAVALLVDEGAFVKQGQPLLRMND 111

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +     +   K S        D   +           L+ A  S                
Sbjct: 112 VLLQAQLKQAKASFDQANKAYDRANTLFKQGYLSAAALDNAQASMLTTQAAMETAQTQLS 171

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                  +S +       L ++ S       +  +   +   L   + +L +++      
Sbjct: 172 LATVRAPVSGIITKRTAVLGQVVSPGAELFRM-VRDGRVELNLEVVETELALVRPNMAAT 230

Query: 210 AVSQN 214
             SQ+
Sbjct: 231 VTSQS 235


>gi|228917208|ref|ZP_04080765.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228929616|ref|ZP_04092634.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228987816|ref|ZP_04147925.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229141294|ref|ZP_04269832.1| multidrug resistance protein A [Bacillus cereus BDRD-ST26]
 gi|229198717|ref|ZP_04325415.1| multidrug resistance protein A [Bacillus cereus m1293]
 gi|228584739|gb|EEK42859.1| multidrug resistance protein A [Bacillus cereus m1293]
 gi|228642075|gb|EEK98368.1| multidrug resistance protein A [Bacillus cereus BDRD-ST26]
 gi|228771864|gb|EEM20321.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228830003|gb|EEM75622.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842409|gb|EEM87500.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 211

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 51  KLTDWKAEVGKNYNEN-----DKLGAVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 104

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 105 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LTGKVEQVGL 160

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 161 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 210


>gi|218131242|ref|ZP_03460046.1| hypothetical protein BACEGG_02848 [Bacteroides eggerthii DSM 20697]
 gi|217986544|gb|EEC52879.1| hypothetical protein BACEGG_02848 [Bacteroides eggerthii DSM 20697]
          Length = 355

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 39  PIEISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
            I+  +S+SG+  +     V   +        SG I+K  V++G+++  G  L   +  +
Sbjct: 33  KIDTVISASGQSYLQYPGKVKAAQDISLAFRVSGTIQKIYVKDGARVQAGQLLAELDPTD 92

Query: 92  TTDLIDLKKVSIKNLRCHIDT 112
               +D  +   K ++   + 
Sbjct: 93  YQVQLDATEAEYKQIKAEAER 113


>gi|159044499|ref|YP_001533293.1| hypothetical protein Dshi_1951 [Dinoroseobacter shibae DFL 12]
 gi|157912259|gb|ABV93692.1| hypothetical protein Dshi_1951 [Dinoroseobacter shibae DFL 12]
          Length = 1097

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 83/275 (30%), Gaps = 16/275 (5%)

Query: 44   VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            V     IL +   +E+ +  +G + +  ++ G  + +G  L    D E    +D++   +
Sbjct: 784  VGGDFTILPDT-RIEVGARVAGELVEIHIDEGDVVSEGDLLARMSDWEPRLEVDVRVAKL 842

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF-NYGISSVYR 162
                  +   +  LD    +   + +   +R E  L FL        ++F    IS V  
Sbjct: 843  AQAEARL---QDLLDGATAEEIAIAEENVARAEAELPFLRSQAERADELFARNAISQVEY 899

Query: 163  SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
                   +   I L                         ++ L  + A  ++ L++ E  
Sbjct: 900  ERLRLEYQTGQIDLRSAQAVLADVTAPPSAPDVAVAEAEIERLNAELAFYRDQLDKVELR 959

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                   + EN+   +     + EL+ E         + +  + +       D +     
Sbjct: 960  ATADGRIVTENVQLLRGKYLQVGELFVEIEDHEIARAEVLVSETDIGLVEVNDRVRLKAW 1019

Query: 283  LEKTREQKTILSPIAGTIVYNQSFSS----SNYAQ 313
                 E+        GT+V     +         +
Sbjct: 1020 AIPDEERI-------GTVVSIAPSAEAEEFGRVVR 1047


>gi|158521639|ref|YP_001529509.1| RND family efflux transporter MFP subunit [Desulfococcus oleovorans
           Hxd3]
 gi|158510465|gb|ABW67432.1| efflux transporter, RND family, MFP subunit [Desulfococcus
           oleovorans Hxd3]
          Length = 326

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 56/186 (30%), Gaps = 20/186 (10%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
                +  I     +   +     +  S +          +   +   +   +   ++SP
Sbjct: 70  AINGRIEEIRVREGDHVKQGQVVARMSSTERAALLDAALGQGESMDYWQDVYKATPLMSP 129

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           I G ++  ++            +  IV  S    + A++    I  V+ G  A +    Y
Sbjct: 130 IDGEVI-VRAVEPGQTVTTQDAV--IV-LSDRLIVGAQMDETDIGMVRPGQKAVISLDAY 185

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE--LRNGFPAEV 413
            +        +++ I    +  +N           + + ++      +    R+G  A V
Sbjct: 186 PNS---AVAGVVDHIAYESTVVNN-----------VTVYEVDILPGTLPDFFRSGMSANV 231

Query: 414 LFTAKN 419
             T K 
Sbjct: 232 DVTVKE 237



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I +++S++G +  + N +EIK   +G I++ +V  G  + QG  +      E   L+D  
Sbjct: 49  IAVTISTTGVVKPK-NRLEIKPAINGRIEEIRVREGDHVKQGQVVARMSSTERAALLDAA 107

Query: 100 KVSIKNL 106
               +++
Sbjct: 108 LGQGESM 114


>gi|90577239|ref|ZP_01233050.1| putative secretion protein [Vibrio angustum S14]
 gi|90440325|gb|EAS65505.1| putative secretion protein [Vibrio angustum S14]
          Length = 349

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 76/272 (27%), Gaps = 31/272 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   +     + ++     ++     L          A L   QK    + +L  +  + 
Sbjct: 97  FEIELEKAKAAYEVATQENKATDDAILAASANVRSADATLVDVQKSYRRVMDLVNRKLLP 156

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
               +  +  +  +   L         ++       DEA                     
Sbjct: 157 LQQGDDAKAKLASAQTALEAARANMSQLINQQGAKGDEA-------------------PQ 197

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                + L+          I +P  G++         +       +M ++      +++A
Sbjct: 198 VKQAAAALSQATLNLSYTNIYAPHDGSLGKVSVR-PGSIVSPGLSVMPLI-EDNTAWLQA 255

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKK-------FKAIIEKIDPIISQQDNNLQTQE 385
               K I  +K G  A++    Y D+  +               I P  +   N ++  +
Sbjct: 256 NYKEKSIGLLKPGMKASIVLDMYPDVTYQGHIIALSPASGSSFSILPPENATGNWVKVPQ 315

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            + V ++  DL        LR G  AEV    
Sbjct: 316 RFPVRIQFDDL---KGKPLLRVGASAEVTIDT 344



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 12/144 (8%), Positives = 46/144 (31%), Gaps = 5/144 (3%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    SG +    V +   + +G  LL+ +       ++  K + +           A+ 
Sbjct: 64  VAPQISGKVLTVNVNDYQHVAEGDLLLSIDPAPFEIELEKAKAAYEVATQENKATDDAIL 123

Query: 119 FLNNKYDVLEKAFESRE---EQLLDFLGK--YHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
             +      +      +    +++D + +              ++S   +L+     M  
Sbjct: 124 AASANVRSADATLVDVQKSYRRVMDLVNRKLLPLQQGDDAKAKLASAQTALEAARANMSQ 183

Query: 174 IYLNRLDLENKSSLLRALLSSHQK 197
           +   +    +++  ++   ++  +
Sbjct: 184 LINQQGAKGDEAPQVKQAAAALSQ 207


>gi|228967665|ref|ZP_04128686.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228792041|gb|EEM39622.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 225

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 65  KLTDWKAEVGKNYNEN-----DKLGAVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 118

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 119 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LTGKVEQVGL 174

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 175 TTANTFSMLPSSNSTANYTKVTQVVPVKISLDHSKSVNIVPGMNVSVRIH 224


>gi|319407633|emb|CBI81282.1| multidrug resistance efflux pump VceA protein [Bartonella sp. 1-1C]
          Length = 318

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/300 (10%), Positives = 87/300 (29%), Gaps = 14/300 (4%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            ++      +        E+L     +       +F         +L      + +    
Sbjct: 7   AYVQGDISAISPKLSGYIEELSIKANQAVKKGDILFRLESGDYQIALDQTKAHLNTQQKV 66

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            + ++ +     + L   Q        +     ++   + + +   Y S   +       
Sbjct: 67  LMRIDAQIVAAHSALDDAQAQKAAASAIETNAQLTLQRIMELKTDRYVSQSNVDNAKSAY 126

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +  + ++     +     AN    +     + +    +        ++  +   + +P  
Sbjct: 127 EQAIANVTRADAQIAAARANIQV-LEAQRHEVESQTKNLELAHDKAKRDLDSTILRAPFD 185

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I    +          Q L  +VP     YI A     Q+Q+++ G  A +    +  
Sbjct: 186 GIIGNLTAKKGDFVVN-GQRLAALVPIH-ALYIEANYKETQLQNIQSGQAAYISVDAF-- 241

Query: 358 IREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            ++  F+  +  + P           Q      T+    + ++I+    +  +  ++ G 
Sbjct: 242 -KKDVFEGTVLSVSPATGAVFSLLPPQNATGNFTKITQRIPIRISIPEHALKSGRIKAGM 300



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 82/263 (31%), Gaps = 19/263 (7%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
            + ++  I    SG I++  ++    + +G  L   E         +T   ++ ++  + 
Sbjct: 9   VQGDISAISPKLSGYIEELSIKANQAVKKGDILFRLESGDYQIALDQTKAHLNTQQKVLM 68

Query: 105 NLRCHIDTEKSALD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +   I    SALD           +E   +   +++++     + + S V N    S Y
Sbjct: 69  RIDAQIVAAHSALDDAQAQKAAASAIETNAQLTLQRIMELKTDRYVSQSNVDNA--KSAY 126

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                 +TR  +               R  + S  K+L +  +  +++  S         
Sbjct: 127 EQAIANVTRADAQIAAARANIQVLEAQRHEVESQTKNLELAHDKAKRDLDSTI----LRA 182

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                   L     +     + +  L     L      KE    L+  Q   A  +S   
Sbjct: 183 PFDGIIGNLTAKKGDFVVNGQRLAALVPIHALYIEANYKE--TQLQNIQSGQAAYISVDA 240

Query: 282 ILEKTREQKTI-LSPIAGTIVYN 303
             +   E   + +SP  G +   
Sbjct: 241 FKKDVFEGTVLSVSPATGAVFSL 263


>gi|94314249|ref|YP_587458.1| heavy metal cation tricomponent efflux protein HmxB [Cupriavidus
           metallidurans CH34]
 gi|93358101|gb|ABF12189.1| membrane fusion protein (MFP-RND) heavy metal cation tricomponent
           efflux HmxB (CzcB-like) [Cupriavidus metallidurans CH34]
          Length = 385

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 78/240 (32%), Gaps = 27/240 (11%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + L++ L     + +++ K L ++              + ++  +  +         R++
Sbjct: 90  AKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSADLAQANSDAAKARAAMTMARRNL 149

Query: 245 NELYDEANLEFANYL--KEISRDLEQNQRTFADEMSKLTILEKTREQKT---------IL 293
           +   +    E A     ++   D +Q         ++L  L                 + 
Sbjct: 150 DRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGGHILAVR 209

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SPI G +V   + +   Y   +   +  V      ++ A    K + HV  G +ATV+F 
Sbjct: 210 SPINGRVVDLNAAT-GAYWNDTTASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFD 268

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y D +       +  +  I+       +             + F + +  LR G  A+ 
Sbjct: 269 AYDDPQ----PGKVRYVGQILDADTRTTKV-----------RMVFDNPDGRLRPGMFAQA 313



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 36/106 (33%), Gaps = 6/106 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            +V++  P +G I     + G ++  G  L T +        DL + +    +       
Sbjct: 91  KLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTID------SADLAQANSDAAKARAAMTM 144

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +    +     +    R+ +         ++ S+  +  ++ +
Sbjct: 145 ARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQL 190


>gi|313885923|ref|ZP_07819662.1| efflux transporter, RND family, MFP subunit [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312924612|gb|EFR35382.1| efflux transporter, RND family, MFP subunit [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 370

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 70/219 (31%), Gaps = 24/219 (10%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             A SQ ++ +      +   ++   +H+Q  +        +E     ANYL +    L 
Sbjct: 104 NQAESQVEIAKIALDEAQQKYKIATELHQQGIV------AEEEYATTKANYL-QAKERLA 156

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ-----QSQPLMKIV 322
             +  +   ++ ++          + S + GTI+       ++  Q         +  I 
Sbjct: 157 SAKDAYNIVLTGMSQRNAQGSTTLVRSTVDGTILDIPVKEGNSVIQANSFNAGTTIATIA 216

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                     KV    I  V  G   TVR      I    F  ++E I P   QQ    Q
Sbjct: 217 -DMTEMIFIGKVDEVDIARVATGLPVTVRIGA---IEGSAFSGVVEYISPKTIQQQQGTQ 272

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
               YE+   IT     D+   +R+   A         +
Sbjct: 273 ----YELKAAIT----IDDYSRIRSDMSANAELITDQVS 303



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 44/112 (39%), Gaps = 4/112 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+ S+  +G+I   + V+ +     GII +   + G  +  G  +   + +     ++  
Sbjct: 48  IQRSIILTGKIAPRNEVMIVPQLN-GIIAEIMKKPGDLVKAGDIIARIKVVPEMGSVNQA 106

Query: 100 KVSIKNLRCHIDTEKSA---LDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +  ++  +  +D  +        L+ +  V E+ + + +   L    +  S 
Sbjct: 107 ESQVEIAKIALDEAQQKYKIATELHQQGIVAEEEYATTKANYLQAKERLASA 158


>gi|94968649|ref|YP_590697.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
 gi|94550699|gb|ABF40623.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
          Length = 407

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 90/263 (34%), Gaps = 32/263 (12%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
              ++  K+T           +  K+  + A+L      + +   + ++++ +Q  L+  
Sbjct: 80  RRATVAAKITARVEQIYADEGMRVKAGQVLAILDQSDARVRLNSAVADRDS-TQAQLSDL 138

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +  +  + +EL  N  E +       +  D A     +Y   I       Q++ A   S+
Sbjct: 139 QVNLKNAEIELHRN-EELQKSGVTTQQALDNARTTVNSYKARIVA----TQQSIAAAESR 193

Query: 280 LTILEKTREQKTILSPIAGTIVYN---------QSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           + + ++  +  T++SP  G +V              +   + +    +  +V  +    I
Sbjct: 194 IKVAQQDLDNCTVVSPFDGIVVSKDAQRGEMVSPISAGGGFTRTG--IATVVDMNSN-EI 250

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V    I  VK+G         Y D +     + +  I P   +Q           V 
Sbjct: 251 EVDVNESYIGRVKEGQPVMATLDAYPDWQ---IPSHVRTIIPTADRQKAT--------VK 299

Query: 391 LKITDLAFSDNNIELRNGFPAEV 413
           ++I+   F   +  +      +V
Sbjct: 300 VRIS---FDKLDPRILPDMGVKV 319



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/185 (10%), Positives = 62/185 (33%), Gaps = 25/185 (13%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILL------PIEISVS---------------SSGE 49
           RN            I+G++ + T +         P+E+  +               +SG 
Sbjct: 16  RNANRGGVFRWFAIILGVLVIGTGAFFALQKKLPPVEVVSAHTSAPGQAQAATLLNASGY 75

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +        + +  +  +++   + G ++  G  L   +  +    ++       + +  
Sbjct: 76  VTP-RRRATVAAKITARVEQIYADEGMRVKAGQVLAILDQSDARVRLNSAVADRDSTQAQ 134

Query: 110 IDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +   +  L     +    + L+K+  + ++ L +     +S  +++     S      ++
Sbjct: 135 LSDLQVNLKNAEIELHRNEELQKSGVTTQQALDNARTTVNSYKARIVATQQSIAAAESRI 194

Query: 167 KLTRM 171
           K+ + 
Sbjct: 195 KVAQQ 199


>gi|330889968|gb|EGH22629.1| HlyD family secretion protein [Pseudomonas syringae pv. mori str.
           301020]
          Length = 283

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 84/288 (29%), Gaps = 29/288 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    + +          ++    SL   L + RS        + +     A       
Sbjct: 4   LVRLDDRIYRQRLDQAIAQLAVQKASLANNLQQRRSAEATIGQRQAELQNSIAQSRKSAA 63

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           DL   + L    +VS+++L      V ++          +   +  I             
Sbjct: 64  DLRRNQALVTDGSVSKSEL-----DVTRAADAQANAAVAEARAVLQIA----------RE 108

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L+ +  +    + + A+  + + +     +   I +P  G +          Y      
Sbjct: 109 DLQTVIVNRGSLEASVANAEAAIELARIDLDNTRIAAPRDGQLGQIGVR-LGAYVNSGAQ 167

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           LM +VP  +     A +   Q+ HV+ G   +            +    +++I P    +
Sbjct: 168 LMALVPEQRWIV--ANMKETQMAHVRLGQPVSFTVDALDGH---EMHGHVQRISPAAGSE 222

Query: 378 ----DNNLQTQEYY----EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                 +  T  +      + ++I   A       LR G    V    
Sbjct: 223 FSLLPADNATGNFVKISQRIPVRIVVAADQPMLEHLRPGMSVVVSIDT 270


>gi|255022257|ref|ZP_05294251.1| Membrane fusion component of tripartite multidrug resistance system
           [Acidithiobacillus caldus ATCC 51756]
 gi|254968313|gb|EET25881.1| Membrane fusion component of tripartite multidrug resistance system
           [Acidithiobacillus caldus ATCC 51756]
          Length = 337

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 82/297 (27%), Gaps = 35/297 (11%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A    + Q++           + + Y +      L     +  +I+ N  +   +    +
Sbjct: 55  ALYVHDNQVVHEGQPLLKIDPRAYLYALERAEAELAQAERQTTAIHANIAEARAQIEADQ 114

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               +  ++      L ++  +S                       +Q +      +   
Sbjct: 115 VNYQNATRNAQRAAALAQQKYMS----------------------AQQADNEATTAKAAA 152

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                    L      L  NQ       + +   +    + TI +P+ G +         
Sbjct: 153 AKLSADRAALAAQEAQLALNQARIQAAKAAVRSAKLDLSETTIYAPLTGVVSKVDKIHVG 212

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           +    +Q L  ++  ++  +I A      +  V  G  A V    Y + R   F+ ++  
Sbjct: 213 DVVNVNQDLFPLI-GNREYWIEANYKETDLNRVHPGQKADVHIDMYPNHR---FRGVVTS 268

Query: 370 IDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +          +  +       +    V ++IT L        L  G  A V     
Sbjct: 269 LSGGAGNAFSLLPPENATGNWVKVTQRVPVRITILDPDPKK-PLHIGTSASVTIDTG 324



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 59/195 (30%), Gaps = 13/195 (6%)

Query: 30  GLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
               ++    I     S+ +     ++V I    +G I    V +   + +G PLL  + 
Sbjct: 17  AFGAYAYF-QIANYYPSTDDAYVHAHMVNIAPRVTGHIVALYVHDNQVVHEGQPLLKIDP 75

Query: 90  -------IETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFESREEQLLD 140
                        +   +     +  +I   ++ +  D +N +         +   Q   
Sbjct: 76  RAYLYALERAEAELAQAERQTTAIHANIAEARAQIEADQVNYQNATRNAQRAAALAQQKY 135

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
              +     +       + +         +   + LN+  ++   + +R+       + T
Sbjct: 136 MSAQQADNEATTAKAAAAKLSADRAALAAQEAQLALNQARIQAAKAAVRS-AKLDLSETT 194

Query: 201 MMKNLFEKNAVSQND 215
           +   L     VS+ D
Sbjct: 195 IYAPL--TGVVSKVD 207


>gi|229118060|ref|ZP_04247419.1| multidrug resistance protein A [Bacillus cereus Rock1-3]
 gi|228665283|gb|EEL20766.1| multidrug resistance protein A [Bacillus cereus Rock1-3]
          Length = 211

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 61/173 (35%), Gaps = 17/173 (9%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSS 309
           A  +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++
Sbjct: 48  AAGKLTDWKAEVGKNYNEN-----DKLGAVTVAGANGEQTVDVTIPQNATVVQSNA-TTN 101

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            +     P+          ++ A +    +  V+KG    V    Y D         +E+
Sbjct: 102 AFVGAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LSGKVEQ 157

Query: 370 IDPIISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
           +    +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 158 VGLTTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 210


>gi|226227588|ref|YP_002761694.1| secretion protein HlyD family protein [Gemmatimonas aurantiaca
           T-27]
 gi|226090779|dbj|BAH39224.1| secretion protein HlyD family protein [Gemmatimonas aurantiaca
           T-27]
          Length = 398

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 61/215 (28%), Gaps = 28/215 (13%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQR 271
             +++ + +    + E+ +   E+        I           A       ++L   + 
Sbjct: 115 TRVSRGQALAILESPEVGQIRAEETEAQELVKIASENFAREQRLATQGISSRKELLDAEA 174

Query: 272 TFADEMSKLTILEKTRE----------QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               + ++L   E              Q  + +P  G +V  +  S          L   
Sbjct: 175 ELRRQQARLRSAESRLSVLGAGHGSDGQFAVTAPFDGVVVS-RDASLGEMTTSQDTLFT- 232

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V      +I   +  + +  V +     VR   Y D     F+  I  + PI+      +
Sbjct: 233 VADLSRLWIELDIFERDLARVHEKQRVVVRTTAYPDRT---FEGQISYVGPILDPARRTV 289

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                    + +      + +  LR G  AE    
Sbjct: 290 ------RARIDVP-----NRDGLLRPGMFAEATIV 313


>gi|58579777|ref|YP_198793.1| acriflavin resistance protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188574415|ref|YP_001911344.1| acriflavin resistance protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58424371|gb|AAW73408.1| acriflavin resistance protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188518867|gb|ACD56812.1| acriflavin resistance protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 417

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 89/269 (33%), Gaps = 33/269 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V    I++V   +  K+ ++      R++     + L  + ++ Q+++   +    ++ V
Sbjct: 84  VVARRIATVSAQVTGKVLQVMIEEGMRVEAGQVMATLDPIETNAQREVGAAQLAAARSQV 143

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
              ++  Q  +     + L+  + EQ       ++   + +         +   L+  QR
Sbjct: 144 --QNVQAQLVVAEADAMRLQSLVGEQLVSRSQYDQAMSQRDA--------LRAQLQVAQR 193

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP-------LMKIVPH 324
             A    +L++ +   +   + +P AG +V  ++                   +  IV  
Sbjct: 194 NVAVATHELSLSDIHVDFTVVRAPFAG-VVTAKAAQPGEIVSPLATGGFTRTGIGTIV-D 251

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                +  +V    I  V+    A V    Y D R         K+  II   D    T 
Sbjct: 252 MDSLEVEVEVGEAYIGRVQPKMPAEVILDAYPDWRIPA------KVIAIIPAADRGKAT- 304

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEV 413
               V +++   A    +  +       V
Sbjct: 305 ----VKVRV---ALKVKDARIVPDMGVRV 326



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/131 (11%), Positives = 46/131 (35%), Gaps = 3/131 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
              + +SG +     +  + +  +G + +  +E G ++  G  + T + IET    ++  
Sbjct: 75  SSVLDASGYV-VARRIATVSAQVTGKVLQVMIEEGMRVEAGQVMATLDPIETNAQREVGA 133

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +   R  +   ++ L  +  + D +       E+ +         +        +   
Sbjct: 134 AQLAAARSQVQNVQAQL--VVAEADAMRLQSLVGEQLVSRSQYDQAMSQRDALRAQLQVA 191

Query: 161 YRSLKMKLTRM 171
            R++ +    +
Sbjct: 192 QRNVAVATHEL 202


>gi|32470746|ref|NP_863739.1| membrane-fusion protein [Rhodopirellula baltica SH 1]
 gi|32442891|emb|CAD71410.1| probable membrane-fusion protein [Rhodopirellula baltica SH 1]
          Length = 467

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 17/199 (8%)

Query: 226 STLELRENIH--EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM-SKLTI 282
           +  +L   I+  E +  L  +  L+ +A+ E    +        Q     AD + ++  +
Sbjct: 262 TEGQLLAKINPRELEYELAGLRALHGQADQERRGSMASHDFGKSQIAALEADRLKTQTEL 321

Query: 283 LEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           L   ++   I SPI G IV  +   S      + + L +I P      +   +  +   H
Sbjct: 322 LNHRKDNLEIRSPIDGVIVSGDWKQSEGAPLTRGETLFEIAPVGS-MKVEIAIPEENFAH 380

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           V+ G    V      D         I ++ P  + +D+           + + ++   D 
Sbjct: 381 VQPGMLTRVHTHAMPDR---VMHGAITRVHPAATIRDSEN---------VFLAEVTVDDQ 428

Query: 402 NIELRNGFPAEVLFTAKNT 420
           +  LR G            
Sbjct: 429 DGLLRPGMKGRATIYGNKR 447



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 8/102 (7%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
               I  PF G +++  V  G  + +G  L      E    ++ +   ++ L    D E+
Sbjct: 238 QRRFIAVPFDGPLQECMVRPGDTVTEGQLLAKINPRE----LEYELAGLRALHGQADQER 293

Query: 115 ----SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               ++ DF  ++   LE      + +LL+         S +
Sbjct: 294 RGSMASHDFGKSQIAALEADRLKTQTELLNHRKDNLEIRSPI 335


>gi|254227537|ref|ZP_04920969.1| Multidrug resistance efflux pump [Vibrio sp. Ex25]
 gi|151940149|gb|EDN58975.1| Multidrug resistance efflux pump [Vibrio sp. Ex25]
          Length = 341

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 72/223 (32%), Gaps = 24/223 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S+ +   +     + ++ + +         +        R+ L+  Q +     +L ++ 
Sbjct: 86  SRPYLLAVKQAKAAYQLAVQQHDVADKQVTEAVAGLDAARSNLTEAQVEYKRTDSLVKRK 145

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             S  DL+  +  +  +   L +     +  + +  E   EA +      +         
Sbjct: 146 LASDQDLDTAKNKLANAQASLEQARATVEKAIANRGEEGAEAAVVQQAAAQ--------- 196

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                     L   E       I SP+ G      +    +     Q L  ++      +
Sbjct: 197 ----------LAQAELNLSYTDITSPVDGIAGEINTH-VGSVVSVGQTLFPVI-LKDSYW 244

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +RA      + H+K G  A V    Y D+    +KA +E++ P
Sbjct: 245 VRANFKETDLTHIKAGMHADVVIDMYPDV---VWKATVEQLSP 284


>gi|307719631|ref|YP_003875163.1| transmembrane transport protein [Spirochaeta thermophila DSM 6192]
 gi|306533356|gb|ADN02890.1| putative transmembrane transport protein [Spirochaeta thermophila
           DSM 6192]
          Length = 285

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 85/288 (29%), Gaps = 37/288 (12%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +L      R   L    G    T   +     +++   +     ++  +     +LE + 
Sbjct: 32  LLSSPIAERLVALEVHEGDQVETDQILARLDQAALDLKIAALQAQLEQLTYQAEELEARI 91

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              + +    +      K L E  AVS   +++    +     EL      +K +     
Sbjct: 92  RQAQEMRDYLRTTYERNKTLLEAQAVSPQTVDELASRLSNQEAELAALQARRKALGAQRK 151

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L  E                             L  L+  R +  I +P +G +     
Sbjct: 152 ALRAE-----------------------------LEGLQLQRTRTLITAPSSGIVEEV-F 181

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           +          P+++ V           V  + +  ++ G    VR     +        
Sbjct: 182 YDVGEMVPAFSPVVE-VADLAHVSTTVYVEERTLALIRPGDEVRVR-TALDERT-----G 234

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            + K+          ++T E  E ++    +A  + ++ L+ G P EV
Sbjct: 235 TVVKLPTRAEFSPKEVRTPETREALVYAVKVAIPNEDLVLKIGMPVEV 282



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 2/144 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           + E     + SP +  +   +V  G Q+     L   +       I   +  ++ L    
Sbjct: 25  IVEGTQYLLSSPIAERLVALEVHEGDQVETDQILARLDQAALDLKIAALQAQLEQLTYQA 84

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +  ++ +       D L   +E R + LL+       T  +     +S+    L     R
Sbjct: 85  EELEARIRQAQEMRDYLRTTYE-RNKTLLEAQAVSPQTVDE-LASRLSNQEAELAALQAR 142

Query: 171 MRSIYLNRLDLENKSSLLRALLSS 194
            +++   R  L  +   L+   + 
Sbjct: 143 RKALGAQRKALRAELEGLQLQRTR 166


>gi|262195750|ref|YP_003266959.1| efflux transporter RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
 gi|262079097|gb|ACY15066.1| efflux transporter, RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
          Length = 430

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 70/217 (32%), Gaps = 20/217 (9%)

Query: 209 NAVSQNDLNQQERIVYKS---TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             V Q  + + +R+   +    LE  E   +       +     E  L+ A + + ++ +
Sbjct: 76  GLVRQVLVEEGDRVAQGAVLVRLEDEEQRTQLARAKNDLARAERELALQTAMHERGVTSE 135

Query: 266 --LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             LE  Q              +     T+ +PIAGTI   +     +     QPL ++  
Sbjct: 136 QALESAQYERTRLALMRDDAARALRYTTVRAPIAGTITQ-RLVKRGDNVTVQQPLFQLT- 193

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                  R  V  K++  +  G  A +  P   +         +E+I P++  Q      
Sbjct: 194 DFGSLVARVYVPEKKLDALGAGQQARITAPATGEAEH---SGTVERIAPLVDPQSGT--- 247

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                  +K+T          L  G   +V    +  
Sbjct: 248 -------VKVTINVPGARAASLFPGMFVDVALVTERR 277



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 56/162 (34%), Gaps = 1/162 (0%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
              PIE  +  S  +  ED+V  + +   G++++  VE G ++ QG  L+  ED E    
Sbjct: 48  ATGPIEDVLRFSANLEAEDDVQVL-ARAPGLVRQVLVEEGDRVAQGAVLVRLEDEEQRTQ 106

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   K  +      +  + +  +        LE A   R    L       +        
Sbjct: 107 LARAKNDLARAERELALQTAMHERGVTSEQALESAQYERTRLALMRDDAARALRYTTVRA 166

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            I+       +K     ++      L +  SL+  +    +K
Sbjct: 167 PIAGTITQRLVKRGDNVTVQQPLFQLTDFGSLVARVYVPEKK 208


>gi|182413371|ref|YP_001818437.1| RND family efflux transporter MFP subunit [Opitutus terrae PB90-1]
 gi|177840585|gb|ACB74837.1| efflux transporter, RND family, MFP subunit [Opitutus terrae
           PB90-1]
          Length = 715

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 53/140 (37%), Gaps = 16/140 (11%)

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A  +++L    + R +    +P+ G ++   +       +  + + ++       ++ A+
Sbjct: 232 AAFITELAQAGEARRKVVYRAPVDGVVIEKPAV-QGMMVRPGERIFRLA-DLSTVWVNAQ 289

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +  K +  V +G  A VR   +   R  +F   +E + P I  +    Q        L +
Sbjct: 290 IYEKDLAFVHEGQHAVVR-TSFGQER--EFHGEVEVLIPEIVNETRTAQ------ARLVL 340

Query: 394 TDLAFSDNNIELRNGFPAEV 413
            +   +     L+ G   +V
Sbjct: 341 DNPDRA-----LKPGMFVDV 355


>gi|154252446|ref|YP_001413270.1| RND family efflux transporter MFP subunit [Parvibaculum
           lavamentivorans DS-1]
 gi|154156396|gb|ABS63613.1| efflux transporter, RND family, MFP subunit [Parvibaculum
           lavamentivorans DS-1]
          Length = 390

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 70/212 (33%), Gaps = 17/212 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V    ++  + ++  +  +L+  + + +  L      Y  A  +        +R  ++ 
Sbjct: 103 FVDGQRMDTGDLVITINDEDLKARLMQAEARLTLTRANYQRAE-QLVKQGSGTARARDEA 161

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
              F    +++   +   ++ TI +P  G I   +  S   Y    +P+  +        
Sbjct: 162 LNDFKSAEAEVAAAKTALDKATITAPFPGII-GLRQVSLGQYLTAGEPIATLA-DVDNLR 219

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I   V+   + HV+KG    V F        +    +I  +DP++S +   L        
Sbjct: 220 IDFSVSEVFLTHVRKGQDVRVLFDALPGNAYR---GVISAVDPVVSTEGRALS------- 269

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                     +    LR G    V    +  T
Sbjct: 270 ----ARAVLPNEEGALRPGIFGRVEIVTETRT 297



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 14/132 (10%), Positives = 46/132 (34%), Gaps = 1/132 (0%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+++ VS+ G +  +   + I+   +GI+      +G ++  G  ++T  D +    +  
Sbjct: 71  PVQVKVSALGTLQAD-QAITIRPEINGIVTSIDFVDGQRMDTGDLVITINDEDLKARLMQ 129

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  +   R +    +  +   +      ++A    +    +      +           
Sbjct: 130 AEARLTLTRANYQRAEQLVKQGSGTARARDEALNDFKSAEAEVAAAKTALDKATITAPFP 189

Query: 159 SVYRSLKMKLTR 170
            +    ++ L +
Sbjct: 190 GIIGLRQVSLGQ 201


>gi|78189370|ref|YP_379708.1| M50 family peptidase [Chlorobium chlorochromatii CaD3]
 gi|78171569|gb|ABB28665.1| peptidase, M50 family [Chlorobium chlorochromatii CaD3]
          Length = 720

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 58/147 (39%), Gaps = 10/147 (6%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R   AS   + LL  + + GL+      P   +VS+ G + +  +V  + +  +G + ++
Sbjct: 425 RPRVASATALFLLIFLVVTGLL------PFPRNVSAPGIVESYPDVKVV-NLSAGSVVEY 477

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G +++ G PL+  E+ E    +   +  +  +R     E+ AL         +++ 
Sbjct: 478 LVTPGQRVVAGQPLVRLENPELDFALASAESRVTEIRVR---ERLALGKRIADLKPVQQE 534

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGI 157
             + E +L            +    G 
Sbjct: 535 LAAVEAELAKLQRDKQELVVRARAAGQ 561


>gi|298369453|ref|ZP_06980770.1| fatty acid efflux system protein [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298282010|gb|EFI23498.1| fatty acid efflux system protein [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 395

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 82/273 (30%), Gaps = 31/273 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F          L   + + +         + +  L +A L+  Q DL   + L   +A+S
Sbjct: 102 FQLAYDRAQNELIQAIRQNKQQTATNSQAKAQVLLRKADLARAQADLRRRELLSGTDAIS 161

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +L+     V ++   L+     + +    I                         Q  
Sbjct: 162 GEELSHARAAVVQAQAALKAVEAAETSAQAAIGNNIPLRQ-----------------QPA 204

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +S++       ++  I +PIAG +             Q  PLM +VP     ++ A
Sbjct: 205 VQTAVSRIKDAWLNLQRTQIHAPIAGQVAKRNV-QVGQRITQGVPLMAVVPLDN-LWVDA 262

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQ 382
                Q++ ++ G +  +    Y       +   +  +           P  +   N ++
Sbjct: 263 NFKESQLRKMRIGQSVEMVSDLYGSKV--VYHGKVMGLSAGTGSAFSLLPAQNATGNWIK 320

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +   V + +       N + +      +V  
Sbjct: 321 VVQRVPVRISLDPRELRANPLRMGLSMTVKVDI 353



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 83/216 (38%), Gaps = 24/216 (11%)

Query: 6   WKNLKRNHPASLKR-MTLLSIIGIIG--------LITWSILLPIEISVSSSGEILNEDNV 56
            + L+ + P   KR +TL++++ II          + W      E +  +        ++
Sbjct: 14  TEALRTDFPYRRKRNLTLVTLLFIIIALGVTLAYFLFWQHEEETEDAYVA-------GHL 66

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET-----TDLIDLKKVSIKNLRCHID 111
           V+I    +G ++K   ++   + +G  L+T +D +          +L +   +N +    
Sbjct: 67  VQITPQITGTVRKVMFDDTELVKKGDVLITLDDSDFQLAYDRAQNELIQAIRQNKQQTAT 126

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLL---DFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             ++    L  K D+     + R  +LL   D +     + ++       +  ++++   
Sbjct: 127 NSQAKAQVLLRKADLARAQADLRRRELLSGTDAISGEELSHARAAVVQAQAALKAVEAAE 186

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           T  ++   N + L  + ++  A+       L + + 
Sbjct: 187 TSAQAAIGNNIPLRQQPAVQTAVSRIKDAWLNLQRT 222


>gi|319427620|gb|ADV55694.1| macrolide eflux system, membrane fusion protein subunit, MacA
           [Shewanella putrefaciens 200]
          Length = 428

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 94/279 (33%), Gaps = 26/279 (9%)

Query: 152 VFNYGISSVYR-SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + N  + ++ + S+  +++        +   E K   L A + S  +  T+ + L     
Sbjct: 63  LANGTLQALKQVSVGAQVSGQIDSLFVQSGDEVKQGDLIAQIDSLAQQNTIKEALASLKI 122

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           ++      ++  + ++ LE      +           Y+ A      Y  EI +   + Q
Sbjct: 123 IN-AQYRAKQAQIQQAKLEFVRQ-QQMLADNASSRASYEAAEATLTVYQAEIEQ--LEAQ 178

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLT 328
           +  A+   K+   +       I +P+ GT+VY+           +Q    IV        
Sbjct: 179 KQQAEI--KVDSAKIDLGYTKITAPMDGTVVYSAV-EVGQTVNANQTTPTIVEMAQLDTM 235

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNN 380
            ++A+++   I +VK G      F          + A I  I+P          S   ++
Sbjct: 236 TVKAEISEADIINVKPGQAVY--FTILGQPNRP-YHATIRAIEPGPTSMESSSSSSSSSS 292

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                YY  +  +      + +  LR G   ++      
Sbjct: 293 TTEAIYYYGLFDV-----KNPDRTLRIGMTTQISIVLAK 326



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 56/148 (37%), Gaps = 11/148 (7%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            +  IE +V ++G +     V  + +  SG I    V++G ++ QG  +   + +   + 
Sbjct: 54  YIGDIESTVLANGTLQALKQV-SVGAQVSGQIDSLFVQSGDEVKQGDLIAQIDSLAQQNT 112

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           I     S+K +      +++ +          +  F  +++ L D      S  +     
Sbjct: 113 IKEALASLKIINAQYRAKQAQI-------QQAKLEFVRQQQMLADNASSRASYEA---AE 162

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              +VY++   +L   +     ++D   
Sbjct: 163 ATLTVYQAEIEQLEAQKQQAEIKVDSAK 190


>gi|313893484|ref|ZP_07827054.1| efflux transporter, RND family, MFP subunit [Veillonella sp. oral
           taxon 158 str. F0412]
 gi|313441927|gb|EFR60349.1| efflux transporter, RND family, MFP subunit [Veillonella sp. oral
           taxon 158 str. F0412]
          Length = 354

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 71/215 (33%), Gaps = 18/215 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--EISRDL 266
             ++Q + +     +  +   ++      +    + N   +    +  + L+  +    L
Sbjct: 86  QVIAQINGSDTAAQMQNAEGAVKAAQSAYELAETNANRYRELYAQQAISKLQLDQAENQL 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                      + L +        ++ +P AG I       S       Q +  +     
Sbjct: 146 NATAAQLQQAQASLNLSSNQNSYTSLTAPDAGIITALNL-ESGQVVVAGQNVGTLAAGHD 204

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A +  +++  +  G  AT+ F    D++    + ++ +I P+             
Sbjct: 205 PEAVIA-LPEQELSKIHVGSPATITFWALPDVK---VQGVVREISPVPDPVART------ 254

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           Y V + + +   + + ++L  G    V  T  +T+
Sbjct: 255 YTVKIALQN---APSEVQL--GMTVNVNLTTTDTS 284



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 33/106 (31%), Gaps = 3/106 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFL 120
            G +    V  G  +  G  +      +T   +   + ++K  +      +T  +    L
Sbjct: 68  GGRVINKFVNVGDVVEAGQVIAQINGSDTAAQMQNAEGAVKAAQSAYELAETNANRYREL 127

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +  + +   +  E QL     +     + +      + Y SL  
Sbjct: 128 YAQQAISKLQLDQAENQLNATAAQLQQAQASLNLSSNQNSYTSLTA 173


>gi|167645246|ref|YP_001682909.1| RND family efflux transporter MFP subunit [Caulobacter sp. K31]
 gi|167347676|gb|ABZ70411.1| efflux transporter, RND family, MFP subunit [Caulobacter sp. K31]
          Length = 386

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 69/204 (33%), Gaps = 20/204 (9%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L  Q R    S    R  + E ++ L    EL  +  L  +       R    + +  A 
Sbjct: 114 LRAQARQQEASVASARATLAEAQSALARSRELQAKGYLAASALDTANMRQQTASAQVAAA 173

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
           E ++   L +   Q  + +P++G I   +S +          L +IV       + A++ 
Sbjct: 174 EAARGETLAR-LGQAVVRAPVSGLISR-RSVTKGQIISPGTELFRIV-RDGRLELDAEIP 230

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              +  ++ G  ATV        +  +    I  +   ++ Q             + +  
Sbjct: 231 ESDLSALRAGMPATV-----TSDQVGQTTGTIRIVTSEVNTQT-----------RVGLAR 274

Query: 396 LAFSDNNIELRNGFPAEVLFTAKN 419
           ++ +  +   R+G  A     A +
Sbjct: 275 ISLAPGS-GFRSGMFARAQIAAGS 297



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 54/147 (36%), Gaps = 8/147 (5%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIK-KFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +   +++SG +   + V  + +   G+       E G  + QG  L+   D         
Sbjct: 62  LPRIINASGTVTPWEEV-PVGAETGGLTAVSVNAEEGQTVRQGQVLVAMNDTMLRAQARQ 120

Query: 99  KKVSIKNLRCHIDTEKSALD---FLNNKYDVLEKAFES---REEQLLDFLGKYHSTCSKV 152
           ++ S+ + R  +   +SAL     L  K  +   A ++   R++     +    +   + 
Sbjct: 121 QEASVASARATLAEAQSALARSRELQAKGYLAASALDTANMRQQTASAQVAAAEAARGET 180

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRL 179
                 +V R+    L   RS+   ++
Sbjct: 181 LARLGQAVVRAPVSGLISRRSVTKGQI 207


>gi|9453839|dbj|BAB03273.1| myosin [Chara corallina]
          Length = 2182

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 77/204 (37%), Gaps = 7/204 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E    +       +  +   ++    ++  + K D +++     EEQ+ D + +  S  S
Sbjct: 990  EENSKLKELVEDYEKKKALEESSAKRIEEADLKRDAIQELLNRSEEQVQDLISENQSLQS 1049

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +  N  + +  R L+ +   M+ + L + DL+     L A   + + +   +K   E   
Sbjct: 1050 EKLNLQLDN--RILRQQALSMKDLELEKQDLQRNLQHLEANSQALRAENQTLKQQLE--- 1104

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              Q +    +R +       +    E + +   + +L  +       +L+  S+ L    
Sbjct: 1105 --QLESQDLQRNLQHLEANSQALRAENQTLKYQLEQLESQDLQRDLQHLEANSQALRAEN 1162

Query: 271  RTFADEMSKLTILEKTREQKTILS 294
            +T   ++ +L   +  R  + + +
Sbjct: 1163 QTLKQQLEQLESQDLQRNLQHLEA 1186



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 73/216 (33%), Gaps = 14/216 (6%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
              L   E  +    +   + + + LR    T       L  + + LE     R+ Q L+ 
Sbjct: 1101 QQLEQLESQDLQRNLQHLEANSQALRAENQT-------LKYQLEQLESQDLQRDLQHLEA 1153

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              +     ++     +  +          ++ +  N   L  ++  L+  L         
Sbjct: 1154 NSQALRAENQTLKQQLEQLESQ--DLQRNLQHLEANSQALRAENQTLKQQLEQLTSKGGT 1211

Query: 202  MKNLFEKNAVSQNDLNQQERIVYK---STLELRENIHEQKNMLRHINELYDEANLEFANY 258
            +  L    A S+ D+++ E  + +   +    +    E + +   + +L  +       +
Sbjct: 1212 V--LKIGGASSKFDISEPEPAIGETEFTEANSQALRAENQTLKYQLEQLESQDLQRNLQH 1269

Query: 259  LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            L+  S+ L    +T   ++ +L   +  R  + + +
Sbjct: 1270 LEANSQALRAENQTLKQQLEQLESQDLQRTLQHLEA 1305



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 87/258 (33%), Gaps = 45/258 (17%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL-------------NNKYDVLE 128
              L   E  +    +   + + + LR    T K  L+ L             ++K+D+ E
Sbjct: 1286 QQLEQLESQDLQRTLQHLEANSQALRAENQTLKQQLEQLTSKGGTVLKIGGASSKFDISE 1345

Query: 129  KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS----------------------LKM 166
                  E +  +   +     ++     +  +                         LK 
Sbjct: 1346 PEPAIGETEFTEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQALRAENQTLKQ 1405

Query: 167  KLTRMRSIYLNR--LDLENKSSLLRALLSSHQKDLTMMKN-----LFEKNAVSQNDLNQQ 219
            +L ++ S  L R    LE  S  LRA   + ++ L  + +     L    A S+ D+ + 
Sbjct: 1406 QLEQLESQDLQRNLQHLEANSHALRAENQTLKQQLEQLTSKGGTVLKIGGASSKFDIREP 1465

Query: 220  ERIVYK---STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            E  + +   +    +    E + + + + +L  +       +L+  S+ L    +T   +
Sbjct: 1466 EPAIGETEFTEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQALRAENQTLKQQ 1525

Query: 277  MSKLTILEKTREQKTILS 294
            + +L   +  R  + + +
Sbjct: 1526 LEQLESQDLQRNLQHLEA 1543



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 73/238 (30%), Gaps = 25/238 (10%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK--------YDVLEKAFES 133
              L   E  +    +   + + + LR    T K  L+ L ++         +    A  +
Sbjct: 1372 QQLEQLESQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSHALRA 1431

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSV---YRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              + L   L +  S    V   G +S     R  +  +        N   L  ++  L+ 
Sbjct: 1432 ENQTLKQQLEQLTSKGGTVLKIGGASSKFDIREPEPAIGETEFTEANSQALRAENQTLKQ 1491

Query: 191  LLSSHQKD---------LTMMKNLFEKNAVSQNDLNQQE-----RIVYKSTLELRENIHE 236
             L   +               + L  +N   +  L Q E     R +       +    E
Sbjct: 1492 QLEQLESQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQALRAE 1551

Query: 237  QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             + + + + +L  +       +L+   + L     T   ++ +L   +  R  + + +
Sbjct: 1552 NQTLKQQLEQLESQDLQRNLQHLEAKCQALRAENETLKQQLEQLESQDLQRNLQHLEA 1609



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 75/219 (34%), Gaps = 5/219 (2%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q   LL  E       +   KV+   L    +    A   + +K + L +     +E
Sbjct: 939  QVEQMKILLAKEREGHEADLAQAKVAAAQL-LEAEMSAQASKEVLDKVEALSEENSKLKE 997

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             + D+  K     S       + + R    +L       +  L  EN+S     L     
Sbjct: 998  LVEDYEKKKALEESSAKRIEEADLKRDAIQELLNRSEEQVQDLISENQSLQSEKLNLQLD 1057

Query: 197  KDLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              +   + L  K+  + + DL +  + +  ++  LR      K  L  +     + NL+ 
Sbjct: 1058 NRILRQQALSMKDLELEKQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQH 1117

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                 +    L    +T   ++ +L   +  R+ + + +
Sbjct: 1118 LEANSQA---LRAENQTLKYQLEQLESQDLQRDLQHLEA 1153



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 48/140 (34%), Gaps = 4/140 (2%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
              L   E  +    +   + + + LR    T K  L+ L ++   L++  +  E      
Sbjct: 1491 QQLEQLESQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQD--LQRNLQHLEANSQAL 1548

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL--LSSHQKDL 199
              +  +   ++       + R+L+    + +++      L+ +   L +     + Q   
Sbjct: 1549 RAENQTLKQQLEQLESQDLQRNLQHLEAKCQALRAENETLKQQLEQLESQDLQRNLQHLE 1608

Query: 200  TMMKNLFEKNAVSQNDLNQQ 219
               + L  +N   +  L Q 
Sbjct: 1609 ANSQALRAENQTLKQQLEQL 1628


>gi|150017724|ref|YP_001309978.1| RND family efflux transporter MFP subunit [Clostridium beijerinckii
           NCIMB 8052]
 gi|149904189|gb|ABR35022.1| efflux transporter, RND family, MFP subunit [Clostridium
           beijerinckii NCIMB 8052]
          Length = 365

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 73/244 (29%), Gaps = 59/244 (24%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           R I     + E   SL  A     + +L   + L++   +SQ + +              
Sbjct: 101 RDIEQAVKNSEAAVSLAEAKYKLAEDNLKRYEPLYQSKFISQAEYD-------------- 146

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                                  + N  +     LEQ        +++L   +   ++  
Sbjct: 147 ----------------------NYVNADETAKDALEQANALHTQSLNQLDYCKLCADKSG 184

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           ++S +                   Q ++ +V  +    +   V   +I  +K      + 
Sbjct: 185 VISSVDA--------EEGQVVTPGQKIITLV-QNNQLEVEINVPENRIDQLKSAKEINIS 235

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           F   +D++    K  + +I P+ +           Y V + + D      +I++  G  +
Sbjct: 236 FSALSDVK---LKGSLGEISPVANDASRT------YRVRINLIDP---PPSIKI--GMSS 281

Query: 412 EVLF 415
            V  
Sbjct: 282 SVSI 285



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 61/159 (38%), Gaps = 8/159 (5%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I K  V  G  + QG  L+  +  +    +   + ++          +  L     +
Sbjct: 75  GGKIIKKNVSVGDNVEQGAVLMELDSRDIEQAVKNSEAAVSLAEAKYKLAEDNLK----R 130

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y+ L ++    + +  +++    +    +     ++++     +L   +        + +
Sbjct: 131 YEPLYQSKFISQAEYDNYVNADETAKDALEQA--NALHTQSLNQLDYCKLCADKSGVISS 188

Query: 184 KSSLLRALLSSHQKDLTMMKN--LFEKNAVSQNDLNQQE 220
             +    +++  QK +T+++N  L  +  V +N ++Q +
Sbjct: 189 VDAEEGQVVTPGQKIITLVQNNQLEVEINVPENRIDQLK 227


>gi|294665438|ref|ZP_06730725.1| multidrug resistance efflux pump [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604806|gb|EFF48170.1| multidrug resistance efflux pump [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 315

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 67/203 (33%), Gaps = 20/203 (9%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y      + + S     L S + D    K+L    A+S 
Sbjct: 97  EVAVQQAEANLAKTVRQVRGLYRTVEGAQAELSAREVTLRSARSDFARRKDLAATGAISN 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      +  +   +  +    +     +++                      NQ   
Sbjct: 157 EELAHARDELAAAEAAVSGSRESLERNRALVDDSA------------------VANQPDV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L        +  +++P++G +   +S       Q    LM +VP  +  ++ A 
Sbjct: 199 QTAAAQLRQAYLNHARTGVVAPVSGYVAR-RSAQVGQRVQPGSVLMAVVPL-EQVWVEAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHYA 356
               Q++H++ G    +    Y 
Sbjct: 257 FKETQLKHMRLGQEVELHSDLYG 279



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 75/215 (34%), Gaps = 21/215 (9%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSP 62
                  A+L+ + ++ I+ IIGL+ W  L+       + +         + N V+I   
Sbjct: 14  AAPSKRRAALRIVAIVVILAIIGLVVWYFLVGRWHEDTDDA-------YVQGNQVQITPM 66

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +     E+G ++ +G  L+  +  +T       +V+++    ++      +  L  
Sbjct: 67  VGGTVVSIGAEDGMRVERGQLLVQLDPADT-------EVAVQQAEANLAKTVRQVRGLYR 119

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLD 180
             +  +    +RE  L      +           IS   +  +         ++  +R  
Sbjct: 120 TVEGAQAELSAREVTLRSARSDFARRKDLAATGAISNEELAHARDELAAAEAAVSGSRES 179

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           LE   +L+     ++Q D+        +  ++   
Sbjct: 180 LERNRALVDDSAVANQPDVQTAAAQLRQAYLNHAR 214


>gi|282889557|ref|ZP_06298099.1| hypothetical protein pah_c001o036 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281500570|gb|EFB42847.1| hypothetical protein pah_c001o036 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 419

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 94/301 (31%), Gaps = 30/301 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           AF + +  L++           ++          L   + ++  IY      ++     +
Sbjct: 93  AFFADDTDLVETGQLLVLLDPTLYQVQYEQELTRLSSTVLQVMQIYDTVKVNQSTVENRK 152

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L   Q D    KNL +  AV+  D          + L+ ++ +++ +  +        
Sbjct: 153 VQLKRAQYDFLNRKNLVDIKAVTNEDYTHSRDAFLTAKLDYQQALNQLQVAVDAAGNTAM 212

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E +       K + +                       +  +I +P  G I   ++    
Sbjct: 213 EEHPILLTQRKAVRQ------------------AYYNLKHCSIYAPCRGHIAK-RTVEVG 253

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                   LM I+P     ++ A     ++ H++ G  ATV F  Y   R  KF  ++  
Sbjct: 254 QAVTPQSYLMAIIPQD-YMWVDANFKETELTHMRVGQPATVTFDIYG--RCAKFDGVVLG 310

Query: 370 I--------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           I          I  Q       +    + ++I           LR G  A V     +T+
Sbjct: 311 IASGTGSVFSLIPPQNATGNWIKIVQRLPVRIGLDPKKMKEFPLRLGLSAYVTVDVTDTS 370

Query: 422 L 422
           L
Sbjct: 371 L 371



 Score = 36.9 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 74/215 (34%), Gaps = 14/215 (6%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
            F      R  P  +  + +L +I +  L+ W        S     +     N+V + S 
Sbjct: 31  QFKESAKNRKKPLIILTVVIL-LIALAWLVLWLAYFRFHQSTD---DAYVNGNLVNVTSV 86

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G    F  ++   +  G  L+  +         L +V  +     + +    +  + +
Sbjct: 87  IAGTPIAFFADDTDLVETGQLLVLLDPT-------LYQVQYEQELTRLSSTVLQVMQIYD 139

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              V +   E+R+ QL      + +  + V    +++       +   + +    +  L 
Sbjct: 140 TVKVNQSTVENRKVQLKRAQYDFLNRKNLVDIKAVTN-EDYTHSRDAFLTAKLDYQQALN 198

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                + A  ++  ++  ++  L ++ AV Q   N
Sbjct: 199 QLQVAVDAAGNTAMEEHPIL--LTQRKAVRQAYYN 231


>gi|156978099|ref|YP_001449005.1| histidine kinase [Vibrio harveyi ATCC BAA-1116]
 gi|156529693|gb|ABU74778.1| hypothetical protein VIBHAR_06903 [Vibrio harveyi ATCC BAA-1116]
          Length = 341

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 86/259 (33%), Gaps = 24/259 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +  +      + E+++ Q+++         S+ +   +     + ++ + +   
Sbjct: 50  RAKILSVAPQVQGQVISVEAKDFQVVNKGDLLLKIDSRPYLLAVKQAKAAYQLAVQQHDV 109

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 +        R+ L+  Q +     +L ++   S  DL+  +  +  +   L + 
Sbjct: 110 ADKQVTEAVAGLDAARSNLTEAQLEYKRTNSLVKRKLASDQDLDTAKNKLANAQASLEQA 169

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +  + +  E   EA +      +                   L   E       I 
Sbjct: 170 RATVEKAIANRGEEGAEAAVVQQAAAQ-------------------LAQAELNLSYTDIT 210

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ G      + +  +     Q L  ++      ++RA      + H+K G  A V   
Sbjct: 211 SPVDGIAGEINTHT-GSVVGIGQTLFPVI-VKDSYWVRANFKETDLTHIKAGMHAEVVID 268

Query: 354 HYADIREKKFKAIIEKIDP 372
            Y D+    + A +E++ P
Sbjct: 269 MYPDV---VWDAKVEELSP 284


>gi|149920451|ref|ZP_01908920.1| membrane fusion protein [Plesiocystis pacifica SIR-1]
 gi|149818766|gb|EDM78209.1| membrane fusion protein [Plesiocystis pacifica SIR-1]
          Length = 396

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 70/211 (33%), Gaps = 16/211 (7%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           ++  + +  ER    + +             + +     E +     Y K I+   E + 
Sbjct: 94  LALEEGDAVERGQTLARIRRDAQSSSVDRANKGLVNAQREYDRVAELYAKGIASQSELDT 153

Query: 271 RTFADEMSKLTILEKTRE--QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
                E++KL   ++ R+    T+++P  G I   +      +      + +I       
Sbjct: 154 AENNLELAKLDKRDRRRDLANTTVVAPFDGIITQ-RFVDEGGFVGSGNQVFEIT-DFDTL 211

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
             R  V  +++  +  G  A +        + ++    +++I PI+              
Sbjct: 212 VARVYVPERELDRIAVGQDAAIVGKA---AKGREGVGQVKRIAPIVDATTGT-------- 260

Query: 389 VILKIT-DLAFSDNNIELRNGFPAEVLFTAK 418
           V + I    A S+       G  AEV  T +
Sbjct: 261 VKVTIGLPAALSEGGKGFLPGMYAEVTLTTE 291



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 61/231 (26%), Gaps = 31/231 (13%)

Query: 38  LPIEISVSSSGEI--------LNEDNVVEIKSPFS-GIIKKFQVENGSQILQGTPLLTFE 88
            P+ ++  + G I          E  +       S G +    +E G  + +G  L    
Sbjct: 53  TPVLLATVAKGTIEGKIRAASTIEAEMQVTVHAESTGRVTSLALEEGDAVERGQTLARIR 112

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
               +  +D     + N +   D               L+ A  + E   LD   +    
Sbjct: 113 RDAQSSSVDRANKGLVNAQREYDRVAELYAKGIASQSELDTAENNLELAKLDKRDRRRDL 172

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +         +     +                               ++T    L  +
Sbjct: 173 ANTTVVAPFDGIITQRFVDEGGFVGSGNQVF------------------EITDFDTLVAR 214

Query: 209 NAVSQNDLNQ----QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             V + +L++    Q+  +     + RE + + K +   ++       +  
Sbjct: 215 VYVPERELDRIAVGQDAAIVGKAAKGREGVGQVKRIAPIVDATTGTVKVTI 265


>gi|152996026|ref|YP_001340861.1| secretion protein HlyD family protein [Marinomonas sp. MWYL1]
 gi|150836950|gb|ABR70926.1| secretion protein HlyD family protein [Marinomonas sp. MWYL1]
          Length = 380

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 95/291 (32%), Gaps = 42/291 (14%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   +  +R+ + +    +    L R  L   Q+D     NL + N +S  D
Sbjct: 91  ALEQAEANLASTIRAVRNDFASLEQQKASVELARIALEKAQQDYKRRVNLKKNNLISNED 150

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L+  E  +  +          QK+      ++ +   L   + LK I             
Sbjct: 151 LSHFESTLTSAQASFS---VAQKSYEASKTKVDNTTVLTHPDVLKAI------------- 194

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             S L        +  ILSP  G I   +S     +      LM ++      ++ A   
Sbjct: 195 --SALKTAWLALNRTQILSPADGYIAQ-RSVQVGQHVSAGNALMSVISLKN-VWVTANFK 250

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQE 385
             Q+ +++ G   T+    Y       +K  ++ I+          P  +   N ++  +
Sbjct: 251 ETQLGNLRAGQAVTLTSDVYGSNV--IYKGTVKGIEPGTGSAFSLLPASNATGNWIKVVQ 308

Query: 386 YYEVILKITDLAFSDNNIELRNG--FPAEVLFT-AKNTTLAQEIIHPITDN 433
              V + +     + +   LR G      V    A  +TL      P+ D 
Sbjct: 309 RVPVRIVLDPETLAAH--PLRPGLSMSVTVDTHNAGESTL-----TPLADT 352



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 55/144 (38%), Gaps = 5/144 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + L +I+  I +  W     I      + +     NV+ + S  SG +    V+N S + 
Sbjct: 18  LILSAIVACIAIYIW--WANIGRYYEKTEDAYVSGNVINVMSQISGTVTDIMVDNTSSVH 75

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +   L+    ++    ++  +    NL   I   ++    L  +   +E A  + E+   
Sbjct: 76  ESDLLVQVNPVDAKLALEQAEA---NLASTIRAVRNDFASLEQQKASVELARIALEKAQQ 132

Query: 140 DFLGKYHSTCSKVFNYGISSVYRS 163
           D+  + +   + + +    S + S
Sbjct: 133 DYKRRVNLKKNNLISNEDLSHFES 156


>gi|114320365|ref|YP_742048.1| RND family efflux transporter MFP subunit [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114226759|gb|ABI56558.1| efflux transporter, RND family, MFP subunit [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 418

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 95/241 (39%), Gaps = 30/241 (12%)

Query: 105 NLRCHIDTEKSALDFLNNKYDVLE-KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            L  H+++ +++      + DV+E  A E R     + L +   T  ++      +    
Sbjct: 60  RLSGHLESPRTSALTAAVEADVIEVSAREGRRVAAGERLVQLDGTDLELQVREQRAEINE 119

Query: 164 LKMKLT-RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           L+ +L      I  +R +L ++    R L +  +++L  ++ L +++  S +DL+   R 
Sbjct: 120 LQAQLALEEHQIEADRRELASE----RELEAIAERELGRVQRLADRDLASGSDLDGARRE 175

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           + +  + +        +    + +L   A L+ A  L +                     
Sbjct: 176 LAQQRMAVSSRRLAVDSAESRLAQLA--ARLDRAEALHD--------------------R 213

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
           L +   + T+ +P AG +      S  +  +  +PL++ V  S    +RA +   +I  +
Sbjct: 214 LARDLGRTTVRAPFAGRVAEVSV-SPGDRVRPGEPLVE-VYDSGALEVRAHLPAGRIGPI 271

Query: 343 K 343
           +
Sbjct: 272 R 272



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 43/130 (33%), Gaps = 2/130 (1%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +     G ++  G  L+  +  +    +  ++  I  L+  +  E+  ++    +   
Sbjct: 81  VIEVSAREGRRVAAGERLVQLDGTDLELQVREQRAEINELQAQLALEEHQIEADRRELAS 140

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             +     E +L     +  +         +    R L  +   + S  L     E++ +
Sbjct: 141 ERELEAIAEREL--GRVQRLADRDLASGSDLDGARRELAQQRMAVSSRRLAVDSAESRLA 198

Query: 187 LLRALLSSHQ 196
            L A L   +
Sbjct: 199 QLAARLDRAE 208


>gi|89093362|ref|ZP_01166311.1| GAF domain protein [Oceanospirillum sp. MED92]
 gi|89082341|gb|EAR61564.1| GAF domain protein [Oceanospirillum sp. MED92]
          Length = 414

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 74/200 (37%), Gaps = 21/200 (10%)

Query: 227 TLELRENIHEQ--KNMLRHINELYDEANLEFANYLKEI----SRDLEQNQRTFADEMSKL 280
           ++EL + +     + +   ++ L  E   +   Y + +      + E  +       ++ 
Sbjct: 203 SVELDQPLATLDDRKLQLKLDNLQGEIQEKQKQYRRALVDGERGEAEVLKAKLQKANAQF 262

Query: 281 TILEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
            + +   +   +L+ ++G IV  +  +S      + + +  IVP +    +  ++     
Sbjct: 263 ALAQHQLDNSVLLAGMSGVIVEGDLRYSIGAAVDKGERIFLIVPETGHKVV-LEIPETDY 321

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           + +K+G  A ++     D     F+  +    P    +DN L     Y V  ++ +    
Sbjct: 322 RFIKQGQRAELKLASIPDR---AFEVALSAPSPTYIAKDNRLV----YLVDAQLKEADL- 373

Query: 400 DNNIELRNGFP--AEVLFTA 417
              + L+ G    A+V    
Sbjct: 374 ---LALQPGMQGIAKVDVGT 390



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 12/134 (8%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K +  + L+      ++  +  I     + ++ S+   G I        + +PF G I+ 
Sbjct: 143 KPSTVSWLRWGGAALVLICLLFIPIEYRVSLDASIR--GAIEAP-----VVAPFDGFIET 195

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLID-----LKKVSIKNLRCHIDTEKSALDFLNNKY 124
             V+ G  +    PL T +D +    +D     +++   +  R  +D E+   + L  K 
Sbjct: 196 ALVKPGDSVELDQPLATLDDRKLQLKLDNLQGEIQEKQKQYRRALVDGERGEAEVLKAKL 255

Query: 125 DVLEKAFESREEQL 138
                 F   + QL
Sbjct: 256 QKANAQFALAQHQL 269


>gi|300771928|ref|ZP_07081799.1| acriflavine resistance protein E [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300761314|gb|EFK58139.1| acriflavine resistance protein E [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 382

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 53/190 (27%), Gaps = 17/190 (8%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            K+ L + +  +++        E   + +      L     DL   Q   A   + LT  
Sbjct: 110 AKANLNIAQANYDRVQTDLKRYEKLAQQDAIAKQTLDYAKTDLANQQAQVASAKAALTTA 169

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV- 342
                +  I +P AGT+       +         L+  +  +    +  +V  K I    
Sbjct: 170 NTNLARSVIRAPFAGTV-GISQVRAGALVSAGTTLLNTISSNDPIAVEIQVNEKDISKFT 228

Query: 343 ---KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
                  ++ +                I  +D  I      L+              AF+
Sbjct: 229 ALRNSHSSSAISLTLPDGTEYPG-HGTIHTVDRAIDPNTGTLKV-----------RAAFN 276

Query: 400 DNNIELRNGF 409
           + N  L  G 
Sbjct: 277 NANRSLVAGM 286



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 63/189 (33%), Gaps = 30/189 (15%)

Query: 22  LLSIIGIIGLITW------------SILLPIEISV----------SSSGEI-----LNED 54
           LL+   I   + W            +   P E  V            +G I     +   
Sbjct: 6   LLTAFFIGSALVWQSCGNKDAKQQGAAQAPAERIVPVTTAVVNEEIVTGNITYPASVVAL 65

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           N  E+++  +G I    V +G+ + +G  L   + I  T  +D  K ++   + + D  +
Sbjct: 66  NETELRAEVNGYITNIFVADGAVVSKGQKLYEIDGIRYTAAVDQAKANLNIAQANYDRVQ 125

Query: 115 SAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           + L   + L  +  + ++  +  +  L +   +  S  + +     +     ++      
Sbjct: 126 TDLKRYEKLAQQDAIAKQTLDYAKTDLANQQAQVASAKAALTTANTNLARSVIRAPFAGT 185

Query: 172 RSIYLNRLD 180
             I   R  
Sbjct: 186 VGISQVRAG 194


>gi|329890773|ref|ZP_08269116.1| hlyD family secretion family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328846074|gb|EGF95638.1| hlyD family secretion family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 338

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 55/147 (37%), Gaps = 10/147 (6%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +  ++G++  E  +++I +   G++++  V+ G ++  G  L   ED E    +     +
Sbjct: 51  AAIANGKVDVEGGIIQIAARRGGVVREVLVQEGDRVTAGQILARQEDDEPRLALQTAAAN 110

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEK----------AFESREEQLLDFLGKYHSTCSKV 152
           +      +      +     +YD L+K            +   + +     +  S  S V
Sbjct: 111 LSEAESQLRLINVDIATAQREYDRLQKLVSTNFVAAQRLDQARDAIASAQARLGSQQSAV 170

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRL 179
                     +  ++LT +R+    R+
Sbjct: 171 QTARARRDEAAYNVELTVIRAPADGRI 197



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 52/181 (28%), Gaps = 36/181 (19%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            +++   N  + E++  L+   +++ Q++   ++ L   N V+   L+Q    +  +   
Sbjct: 103 ALQTAAANLSEAESQLRLINVDIATAQREYDRLQKLVSTNFVAAQRLDQARDAIASAQAR 162

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L                                       Q       ++        E 
Sbjct: 163 LGSQ------------------------------------QSAVQTARARRDEAAYNVEL 186

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I +P  G IV   +   +  +  +   M  +        RA++    I ++       
Sbjct: 187 TVIRAPADGRIVRRYANPGAGASTLNVSNMFDLEPDAPRIARAEIVEADIPNITADQAVE 246

Query: 350 V 350
           +
Sbjct: 247 I 247


>gi|269797080|ref|YP_003310980.1| efflux transporter RND family, MFP subunit [Veillonella parvula DSM
           2008]
 gi|269093709|gb|ACZ23700.1| efflux transporter, RND family, MFP subunit [Veillonella parvula
           DSM 2008]
          Length = 354

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/215 (9%), Positives = 65/215 (30%), Gaps = 18/215 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--EISRDL 266
             ++Q + +     V  +   ++      +    +     +    +  + L+  +    L
Sbjct: 86  QVIAQVNGSDTSAQVQNAEGAVKAAQSAYELAETNAKRYRELYAQQAISKLQLDQAENQL 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                      + L +         + +P  G I       +       Q +  +     
Sbjct: 146 NATSAQLQQAQASLNLSSNQNSYTNLTAPDTGIITAFNI-EAGQVVAAGQSVGTLAAGHD 204

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A +  +++  +  G  AT+ F    ++     + +I +I P+             
Sbjct: 205 PEAVIA-LPEQELSKIHVGSPATITFWALPNVT---VQGVIREISPVPDPVART------ 254

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           Y + + + +   +   ++L  G       +  ++T
Sbjct: 255 YTIKITLQN---APKEVQL--GMTVNANLSTTDST 284



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 3/106 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFL 120
            G +    V  G  +  G  +      +T+  +   + ++K  +      +T       L
Sbjct: 68  GGRVINKFVNVGDVVQAGQVIAQVNGSDTSAQVQNAEGAVKAAQSAYELAETNAKRYREL 127

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +  + +   +  E QL     +     + +      + Y +L  
Sbjct: 128 YAQQAISKLQLDQAENQLNATSAQLQQAQASLNLSSNQNSYTNLTA 173


>gi|120434422|ref|YP_860130.1| HlyD family secretion protein [Gramella forsetii KT0803]
 gi|117576572|emb|CAL65041.1| HlyD family secretion protein [Gramella forsetii KT0803]
          Length = 355

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 68/208 (32%), Gaps = 24/208 (11%)

Query: 214 NDLNQQERIVYKSTLELRENIHE--QKNMLRHINELYDEANLEFANYLKEI------SRD 265
            +  + E        +    I      + L   N  Y +A  +   Y + +         
Sbjct: 80  IEYLRFEEGDKIKKGQTIAKIDAVSLSSQLASANSAYSKAQKDVERYERLLKVGAVSQSA 139

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           LE  +    +  + +  + +      + SPI G +        +++      + +IV   
Sbjct: 140 LEDIRIQKENARANIAQINQQLSFTEVKSPIDGVVNSLMV-EETSFVMPGNEIAEIV-QV 197

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               I+  +    +  +K+G   +++   Y       FK  +  I               
Sbjct: 198 DRLKIKVNIAEDNLSKIKEGQEVSIKTDVYPLET---FKGKVTTISVKADASRK------ 248

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            +++I+++ +      + +LR G  AEV
Sbjct: 249 -FQIIIEVENT----KDNQLRAGLFAEV 271



 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 58/165 (35%), Gaps = 2/165 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   ++++GE    + VV + +   G I+  + E G +I +G  +   + +  +  +   
Sbjct: 54  ISNGLTATGEFKGWEEVVLV-AESQGSIEYLRFEEGDKIKKGQTIAKIDAVSLSSQLASA 112

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +    +  ++  +  L         LE     +E    +                I  
Sbjct: 113 NSAYSKAQKDVERYERLLKVGAVSQSALEDIRIQKENARANIAQINQQLSFTEVKSPIDG 172

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           V  SL ++ T          ++  +   L+  ++  + +L+ +K 
Sbjct: 173 VVNSLMVEETSFVMPGNEIAEI-VQVDRLKIKVNIAEDNLSKIKE 216


>gi|91070001|gb|ABE10927.1| putative membrane fusion protein [uncultured Prochlorococcus
           marinus clone ASNC3046]
          Length = 353

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 55/299 (18%), Positives = 109/299 (36%), Gaps = 33/299 (11%)

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +D+++K    R   +L  L  +    +  F    S       +++   + I  + ++   
Sbjct: 2   FDLIKKNINLRSGIILLSLAIFFVFITNSFKKNKSKDISDFVVQVE--KGILSDSINTSG 59

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQ--ERIVYKSTLELRENIHEQKNM 240
           +   +R      +K   + +   ++   V ++ +     ++       EL  N+ +QK+ 
Sbjct: 60  EVKAIRTSNIGPRKQGVIKEIKVDEGDLVKKDQVLASLDDKDFIYKIEELELNVEKQKSE 119

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                 LY E  +   +Y           +  +    +KL   +  +    I +P  G I
Sbjct: 120 FLRREYLYQEGAVSKEDYESY--------KNNYNISSAKLNDAKAEKSFYLIKAPYGGKI 171

Query: 301 VYNQSFSSSNYAQQS-----QPLMK--IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
              +     +Y   S      P+ K  I   S+   I AKV    I  +K G  A+VR  
Sbjct: 172 -SAKYAEIGSYVTPSTNLSSDPITKNFIFELSEGLEIVAKVPESDIGRIKIGQEASVRIE 230

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
            Y   +     AI++KI     + +N       +EV L   D++      E++ G  A+
Sbjct: 231 AYPSKKY---SAIVKKIATRAVKDNNVTS----FEVTLNFKDIS-----EEIKIGMTAD 277



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 18/126 (14%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSI-----------LLPIEISVSSSGEILNE 53
           M+  +K+N       + LLS+      IT S            ++ +E  + S   I   
Sbjct: 1   MFDLIKKNINLRSG-IILLSLAIFFVFITNSFKKNKSKDISDFVVQVEKGILSD-SINTS 58

Query: 54  DNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
             V  I+         G+IK+ +V+ G  + +   L + +D +    I+  +++++  + 
Sbjct: 59  GEVKAIRTSNIGPRKQGVIKEIKVDEGDLVKKDQVLASLDDKDFIYKIEELELNVEKQKS 118

Query: 109 HIDTEK 114
                +
Sbjct: 119 EFLRRE 124


>gi|89073916|ref|ZP_01160422.1| hypothetical protein SKA34_15140 [Photobacterium sp. SKA34]
 gi|89050244|gb|EAR55748.1| hypothetical protein SKA34_15140 [Photobacterium sp. SKA34]
          Length = 398

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 91/251 (36%), Gaps = 22/251 (8%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +K++  + R    +  ++   +++    L+    ++   K   +   V + ++       
Sbjct: 36  IKIQDVKNRQFNQDMQEVGKITAVDSTALTFSASEILQKKYFKDGAYVKKGEVIAA-LDN 94

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANY-LKEISRDLEQNQRTFADEMSKLTI 282
            ++  ELR++  + K     +  +      +  +   ++I     Q      DE  K   
Sbjct: 95  TQAKAELRKSQTQYKIEQSKLQRMLALVKKQPDSISKQDIENQQLQAHLAKVDEQQK--- 151

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            + +     +++P  G +   + +S  +    S  ++ I+  +    +   ++ K++   
Sbjct: 152 -QDSLSNYELIAPFNGQLTNFK-YSIGSRVSDSDTIVTII-KNDPVEVDYSISQKELADA 208

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G   T+    Y D   K F   +  I P++ Q              + +  +  + + 
Sbjct: 209 KVGQKVTITVDAYKD---KNFTGDVNYIAPLVDQSSG----------RIDVHAVVENSDK 255

Query: 403 IELRNGFPAEV 413
           + L  G  A+V
Sbjct: 256 L-LVPGMFAKV 265



 Score = 41.2 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 34/86 (39%), Gaps = 4/86 (4%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I++K   ++G+ + +G  +   ++ +    +   +   K  +  +   +  L  +  + D
Sbjct: 71  ILQKKYFKDGAYVKKGEVIAALDNTQAKAELRKSQTQYKIEQSKL---QRMLALVKKQPD 127

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSK 151
            + K  +   +QL   L K      +
Sbjct: 128 SISKQ-DIENQQLQAHLAKVDEQQKQ 152


>gi|156976551|ref|YP_001447457.1| hypothetical protein VIBHAR_05325 [Vibrio harveyi ATCC BAA-1116]
 gi|156528145|gb|ABU73230.1| hypothetical protein VIBHAR_05325 [Vibrio harveyi ATCC BAA-1116]
          Length = 400

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/386 (11%), Positives = 116/386 (30%), Gaps = 85/386 (22%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS--- 64
           N      A L  +  L  + +  +       P++    S G ++   ++     P S   
Sbjct: 23  NKATKSFAYLGGLGWLMFVWVGLI----NFTPMD---LSGGSVVQSPHIQL--RPDSTNV 73

Query: 65  -GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    ++   QI +G  +   +  +    ++   VS  + R  + T +  ++     
Sbjct: 74  KGKVDHIYIKPNQQIEKGQLIYELDPTQYEIALNQANVSADSARVALATAQGDIEIEEAN 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +  L +  E+ + QL      Y      +  Y          ++  ++    +   D++ 
Sbjct: 134 HQALVQDLETSKSQLEAAKVDYKLQKKMLNRY----------VEQNQVVQNTITASDIDK 183

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +SS +                      ++++++   E  + K  +++             
Sbjct: 184 QSSAVD---------------------IARHNVLTLESQIKKKQVDISRAKLAIHKAELA 222

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +                         Q        ++   +       + +P  G +   
Sbjct: 223 VETK----------------------QAELRQAEEQIAKAQWDLNSTKVHAPADGFVTN- 259

Query: 304 QSFSSSNYAQQSQPLMKIVPH----SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
                    ++ Q +  ++P     +   Y+  +V  + I+++K G  A      ++   
Sbjct: 260 ------FILREGQRV-SMMPRINMYTNEKYVLMRVNHQAIRNIKPGQPAE-----FSSSV 307

Query: 360 EKK--FKAIIEKIDPIISQQDNNLQT 383
                F A +E I     +   NL  
Sbjct: 308 YPGKIFSATVEGIVEATGESQGNLLG 333


>gi|94499696|ref|ZP_01306233.1| putative HlyD-like secretion protein [Oceanobacter sp. RED65]
 gi|94428450|gb|EAT13423.1| putative HlyD-like secretion protein [Oceanobacter sp. RED65]
          Length = 347

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 71/207 (34%), Gaps = 17/207 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
              S +++ Q E +           ++E K  +R ++++  +              DL++
Sbjct: 67  GFQSGDEVKQGELLFALEHSAEAAAVNEAKARVR-LSQIEFDRAKTLLKKNAASQTDLDR 125

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +   A   ++         +  I +P  G +     +S   Y    + L+++V      
Sbjct: 126 AKANLAINQAQAESAASRLSKFKIKAPFNG-MAGIHDYSEGEYINAGESLLELV-DISTL 183

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +   V    ++ V  G T  +  P +       F   +  I P I++   +L      +
Sbjct: 184 NLDFFVPETNLKDVAVGQTLEISLPAFPKQN---FTGEVIAISPKITETGRSL------K 234

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLF 415
           V  +I     +   + L+ G  A V  
Sbjct: 235 VRARIN----NQKGL-LKPGLFANVFL 256



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 21/174 (12%)

Query: 19  RMTLLSIIGIIGLITWSILLP--------------IEISVSSSGEILNEDNVVEIKSPF- 63
           R     +IGI+ L ++S +                I   + S G +    N   I S   
Sbjct: 2   RTLTTLLIGILALASYSAVANQGLPAEVINVEPQSISNKIESIGTLKA--NKGIILSAEV 59

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I     ++G ++ QG  L   E       ++  K  ++  +   D  K+ L      
Sbjct: 60  SGRITNIGFQSGDEVKQGELLFALEHSAEAAAVNEAKARVRLSQIEFDRAKTLLKKNAAS 119

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
              L++A    +  L     +  S  S++  + I + +  +          Y+N
Sbjct: 120 QTDLDRA----KANLAINQAQAESAASRLSKFKIKAPFNGMAGIHDYSEGEYIN 169


>gi|56477382|ref|YP_158971.1| putative multidrug resistance protein [Aromatoleum aromaticum EbN1]
 gi|56313425|emb|CAI08070.1| putative multidrug resistance protein [Aromatoleum aromaticum EbN1]
          Length = 433

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/289 (10%), Positives = 85/289 (29%), Gaps = 21/289 (7%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+                 ++   R ++       ++  N    + + + ++A ++  
Sbjct: 85  QSLVRLDPADAQVALDQAEAQLAQTVREVRTTYANNSTLTANIAMRQAELARVQADVARA 144

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + D+   + L    AV + +L      +  +                 +           
Sbjct: 145 EDDVARRRPLVATGAVGKEELQHAVTALANARAAGAAATAALAAAREQLTSNQSLTEGTT 204

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                       +N        +++       ++  + +P+ G +   +S       Q  
Sbjct: 205 V-----------ENHPNVQKAAARVREAYLALKRSDLPAPVTGYVAK-RSAQVGQRVQAG 252

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--------KKFKAII 367
            PLM I+P  +  ++ A     Q+Q ++ G    +    Y    E              +
Sbjct: 253 APLMAIIPL-EQVWVDANFKESQLQDMRIGQPVRLAADMYGKKVEYHGTVAGLGAGTGAV 311

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             + P  +   N ++  +   V + +     +++ + +     A V   
Sbjct: 312 FSLLPAQNATGNWIKVVQRVPVRVALDARELTEHPLRVGLSMTATVDVH 360



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 57/195 (29%), Gaps = 2/195 (1%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H        N       + L ++  +IGL        +E     +     + NVV+I   
Sbjct: 6   HTPAPAQTSNPARKRALLGLTALFSVIGLAYGGYWYGVERFRVETDNAYVQGNVVQITPQ 65

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G +     ++   +  G  L+  +  +    +D  +  +      + T  +    L  
Sbjct: 66  VAGTVLAINADDTDYVEAGQSLVRLDPADAQVALDQAEAQLAQTVREVRTTYANNSTLTA 125

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              + +      +  +             V    +      L+  +T + +         
Sbjct: 126 NIAMRQAELARVQADVARAEDDVARRRPLVATGAVG--KEELQHAVTALANARAAGAAAT 183

Query: 183 NKSSLLRALLSSHQK 197
              +  R  L+S+Q 
Sbjct: 184 AALAAAREQLTSNQS 198


>gi|265985684|ref|ZP_06098419.1| secretion protein HlyD family protein [Brucella sp. 83/13]
 gi|264664276|gb|EEZ34537.1| secretion protein HlyD family protein [Brucella sp. 83/13]
          Length = 309

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 59/196 (30%), Gaps = 17/196 (8%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 129 IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 188

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++   L     +  +   +I  L          
Sbjct: 189 TMARVQKLHETRFVAQSELDNAQSTLDQARARLAGADAQIASAKANIAVL---------- 238

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                     +   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 239 -----EAQYNEAASSTKSLKLARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 292

Query: 318 LMKIVPHSKLTYIRAK 333
           +  +VP     YI A 
Sbjct: 293 IAALVPVD-QLYIDAN 307



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 49/202 (24%), Gaps = 6/202 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +   +  +    +D     +       +
Sbjct: 97  VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 156

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 157 RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSTLDQ 216

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+          +   ++L A  +        +K L    A                
Sbjct: 217 ARARLAGADAQIASAKANIAVLEAQYNEAASSTKSLK-LARDKAARDLSFTSLRAPFDGV 275

Query: 227 TLELRENIHEQKNMLRHINELY 248
              L     +     + I  L 
Sbjct: 276 IGNLSGKKGDLVAPGQKIAALV 297


>gi|228469705|ref|ZP_04054673.1| efflux transporter, MFP component, RND family [Porphyromonas
           uenonis 60-3]
 gi|228308724|gb|EEK17450.1| efflux transporter, MFP component, RND family [Porphyromonas
           uenonis 60-3]
          Length = 370

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 70/219 (31%), Gaps = 24/219 (10%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             A SQ ++ +      +   ++   +H+Q  +        +E     ANYL +    L 
Sbjct: 104 NQAESQVEIAKIALDEAQQKYKIATELHQQGIV------AEEEYATTKANYL-QAKERLA 156

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ-----QSQPLMKIV 322
             +  +   ++ ++          + S + GTI+       ++  Q         +  I 
Sbjct: 157 SAKDAYNIVLTGMSQRNAQGSTTLVRSTVDGTILDIPVKEGNSVIQANSFNAGTTIATIA 216

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                     KV    I  V  G   TVR      I    F  ++E I P   QQ    Q
Sbjct: 217 -DMTEMIFIGKVDEVDIARVATGLPVTVRIGA---IEGSAFSGVVEYISPKTIQQQQGTQ 272

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
               YE+   IT     D+   +R+   A         +
Sbjct: 273 ----YELKAAIT----IDDYSRIRSDMSANAELITDQVS 303



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 44/112 (39%), Gaps = 4/112 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+ S+  +G+I   + V+ +     GII +   + G  +  G  +   + +     ++  
Sbjct: 48  IQRSIILTGKIAPRNEVMIVPQLN-GIIAEIMKKPGDLVKAGDIIARIKVVPEMGSVNQA 106

Query: 100 KVSIKNLRCHIDTEKSA---LDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +  ++  +  +D  +        L+ +  V E+ + + +   L    +  S 
Sbjct: 107 ESQVEIAKIALDEAQQKYKIATELHQQGIVAEEEYATTKANYLQAKERLASA 158


>gi|46446852|ref|YP_008217.1| hypothetical protein pc1218 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46400493|emb|CAF23942.1| hypothetical protein pc1218 [Candidatus Protochlamydia amoebophila
           UWE25]
          Length = 354

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 78/190 (41%), Gaps = 5/190 (2%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           + P    +++ G +      + I +P + I+ K  V  G+++ QG PL+ FE+ +    +
Sbjct: 43  VSPFSSYIAAVGVVEAGSENIFIGTPINRIVDKIFVTVGNEVHQGDPLIQFENRDLEANL 102

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            +++++ +  + H+      L+    K D+       ++  +   L K     ++     
Sbjct: 103 KIQELAYQIAQAHVQ----KLESFPRKEDLQSAEASLKKADIEYLLAKNQYEMTRGMQDS 158

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +     +  +L R +   +N+  ++     ++A        +  ++ L  K  ++   +
Sbjct: 159 RALSQEEMNRRLFRYQEAEVNKNQMQANMEKIQAGTWLPDLKIAQLEALQTKARMNAAKI 218

Query: 217 NQQERIVYKS 226
              ER + +S
Sbjct: 219 -DIERTLLRS 227



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 55/165 (33%), Gaps = 20/165 (12%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA---LLSSHQKDLTM 201
                    N  I  +   +     +    +  + DL++  + L+         +    M
Sbjct: 92  QFENRDLEANLKIQELAYQIAQAHVQKLESFPRKEDLQSAEASLKKADIEYLLAKNQYEM 151

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + + +  A+SQ ++N+  R+      E+ +N  + +  +  I       +L+ A     
Sbjct: 152 TRGMQDSRALSQEEMNR--RLFRYQEAEVNKN--QMQANMEKIQAGTWLPDLKIA----- 202

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                   Q       +++   +   E+  + SPI G I+     
Sbjct: 203 --------QLEALQTKARMNAAKIDIERTLLRSPIIGRILQINIH 239


>gi|302036446|ref|YP_003796768.1| putative macrolide-specific efflux protein [Candidatus Nitrospira
           defluvii]
 gi|300604510|emb|CBK40842.1| Efflux transporter, RND family, MFP subunit, putative
           Macrolide-specific efflux protein [Candidatus Nitrospira
           defluvii]
          Length = 424

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 67/210 (31%), Gaps = 18/210 (8%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFANYLKE-ISRDLEQNQRTF 273
           L   +    K+ ++L +   E       I  +   +  ++ A    E     ++  +   
Sbjct: 105 LANAKAAFDKARIDLAQRRRELDRAKSLIGQQFISQNEVDVALTASEGAVAQVKVTEAAV 164

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL---MKIVPHSKLTYI 330
               + L   E   +   I SP+ G ++  +          S  +     I        +
Sbjct: 165 KQAEAMLQAAELDLKYTVIRSPVDGVVIS-RLVEVGQRIAASFTIPMLFLIAEDVTKMQV 223

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V+   I  + +G +A+     Y     ++F   + ++         N+Q    Y+V+
Sbjct: 224 DTNVSEADIGGIAEGKSASFTVDAYP---GEQFHGRVRQV----RNAPINIQNVVTYDVV 276

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           ++     F +    L+ G  A V       
Sbjct: 277 VE-----FENPVFRLKPGMTANVSIVVAKK 301



 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 47/133 (35%), Gaps = 3/133 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+++G I     +  + S  SG+I+    +  S++     +   +        D    S+
Sbjct: 47  VTATGTINPITTIQ-VGSQVSGMIESLHADFNSKVTANQVVARIDPFPYQARRDQAVASL 105

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            N +   D  K+ +D    + ++        ++ +         T S+     +     +
Sbjct: 106 ANAKAAFD--KARIDLAQRRRELDRAKSLIGQQFISQNEVDVALTASEGAVAQVKVTEAA 163

Query: 164 LKMKLTRMRSIYL 176
           +K     +++  L
Sbjct: 164 VKQAEAMLQAAEL 176


>gi|302390679|ref|YP_003826500.1| efflux transporter, RND family, MFP subunit [Thermosediminibacter
           oceani DSM 16646]
 gi|302201307|gb|ADL08877.1| efflux transporter, RND family, MFP subunit [Thermosediminibacter
           oceani DSM 16646]
          Length = 577

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 15/160 (9%)

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            ++S  LE+      +   KL  L    E   I SP+ G +    +       Q  + L 
Sbjct: 332 SDVSDMLEEELEKVRELEDKLRRLYGQYELLEIKSPMDGVVANINA-QPGRTVQAGEWLG 390

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I  +++   + A+V    +  VK+G    V          K F+  +  +  +      
Sbjct: 391 HIY-NAEDMQMWAQVDDVDVLMVKQGSPVKVTVDALP---GKVFEGKVMHVATM----GK 442

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           ++     +EV + +          ELR G  A     A +
Sbjct: 443 DMSGVTRFEVSINV------KGTPELRPGMQARAYIEAGS 476



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 59/176 (33%), Gaps = 17/176 (9%)

Query: 255 FANYLKEISRDLEQNQRTFADEMS---KLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               ++ + + LE  +++ A +++               T+ +P+ G ++  +       
Sbjct: 109 LQGEIESLEQQLETAKKSLAAKLNVEPHEIYGVDPSAGITLRAPVDGRVIGLKV-KEGAE 167

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF------KA 365
            +Q   + ++V       I A++ P + +  K    A +RF  +  + E K         
Sbjct: 168 IKQGDIVARVV-DDSKFRITARLNPGEFEIAKDCRKAFLRFNQFEGVVEGKITDINTEPV 226

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           +          +  +   Q  Y + ++  +         ++ G   +V       T
Sbjct: 227 VEPSPGSGEGSEGGDALYQYVYYMTIEGDNPGL------VQPGMTVQVGVAKGENT 276



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 19/47 (40%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           II++  V+ G  +  G PL+          I+  +  ++  +  +  
Sbjct: 83  IIEEVLVKEGDGVKAGQPLVRLRAPGLQGEIESLEQQLETAKKSLAA 129


>gi|261855276|ref|YP_003262559.1| secretion protein HlyD [Halothiobacillus neapolitanus c2]
 gi|261835745|gb|ACX95512.1| secretion protein HlyD family protein [Halothiobacillus
           neapolitanus c2]
          Length = 402

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 64/220 (29%), Gaps = 24/220 (10%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   +      L       ++        + +    +A     +  L  + N+  K  VS
Sbjct: 126 FQIAVDEAQAGLATAEREQQTANAAINTAQAELMRQKASAQQAEDHLHRLTNIKNKQFVS 185

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L+       +S L +     +Q        +    A     + +K     L Q Q  
Sbjct: 186 EQALSD-----ARSALAVANAAVDQAQAQLAQAKTQAGAEGAENDLIKTAQAKLAQAQYN 240

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            +              +  + +P++G  + N +         +Q +  IV  +   ++ A
Sbjct: 241 LS--------------KTVVRAPMSGR-LANYNIEPGQTVNANQTVCSIV-ATTGLWVDA 284

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                 +  V  G  A +    Y       FK  +  I  
Sbjct: 285 NFKETDLGAVHIGQPAQIESDIYPGH---VFKGHVLSIAA 321



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 4/106 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
             N  +I S  +G+I+    +N   + +G  L T +       +D  +  +       + 
Sbjct: 87  SGNQTQIGSQVAGLIQTTPWQNNKDVQKGDILFTLDPAPFQIAVDEAQAGL----ATAER 142

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           E+   +   N         ++  +Q  D L +  +  +K F    +
Sbjct: 143 EQQTANAAINTAQAELMRQKASAQQAEDHLHRLTNIKNKQFVSEQA 188


>gi|254419518|ref|ZP_05033242.1| auxiliary transport protein, MFP family, putative [Brevundimonas
           sp. BAL3]
 gi|196185695|gb|EDX80671.1| auxiliary transport protein, MFP family, putative [Brevundimonas
           sp. BAL3]
          Length = 399

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 78/264 (29%), Gaps = 34/264 (12%)

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +   L      R  ++L       S    V       +  ++ +    +++      +
Sbjct: 73  ATRRAKLSSRVSGRVTEILVDRNDVLSAGQIVARVEQEDLRSTVTVSQANLQAALRTVNE 132

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            E   +  RA L++ Q        L     VS+    Q + ++ +S   +          
Sbjct: 133 AEANLTSGRATLANAQSAFDRQAGLRADGWVSRASFEQSQALLRESDARVA--------A 184

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           L+   E         +  +++    L                        T+ +P AG +
Sbjct: 185 LKQSVERARAQADAASASVRQAQAQLGFA---------------------TVRAPFAG-V 222

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V  ++ +  +      P+++IV   +      ++    I  +     A +RF  + +   
Sbjct: 223 VAARNRNVGDVLTPGSPIVEIV-DPRSIVFTVRIDESVIGRIHPRQPAAIRFGAHPER-- 279

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQ 384
               A + ++   +  +       
Sbjct: 280 -PLAARVLRLGREVDPETREFTAD 302



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 62/193 (32%), Gaps = 14/193 (7%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSI------------LLPIEISVSSSGEILNEDN 55
              R+   +L+      +I  + ++ W                P++ +V     +     
Sbjct: 17  PAPRSLWRTLRWPATAVVILALVILGWRYGWPHPVETWTMRTAPLDQTVGGPASLDATRR 76

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
              + S  SG + +  V+    +  G  +   E  +    + + + +++     ++  ++
Sbjct: 77  AK-LSSRVSGRVTEILVDRNDVLSAGQIVARVEQEDLRSTVTVSQANLQAALRTVNEAEA 135

Query: 116 ALDFLNNKYDVLEKAFESREEQLLD-FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
            L          + AF+ +     D ++ +     S+       +   +LK  + R R+ 
Sbjct: 136 NLTSGRATLANAQSAFDRQAGLRADGWVSRASFEQSQALLRESDARVAALKQSVERARAQ 195

Query: 175 YLNRLDLENKSSL 187
                    ++  
Sbjct: 196 ADAASASVRQAQA 208


>gi|89094733|ref|ZP_01167668.1| GAF domain protein [Oceanospirillum sp. MED92]
 gi|89080987|gb|EAR60224.1| GAF domain protein [Oceanospirillum sp. MED92]
          Length = 622

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 81/251 (32%), Gaps = 30/251 (11%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           RL  + K       + +   D  +   ++    + + D    +       LE  + + E+
Sbjct: 379 RLSADAKLDSYIQRVIAAPYDGYIHSAIYRAGDLVKKDQLLVQLDDRDLHLEKLKWLSEK 438

Query: 238 KNMLRHINELY---DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             + R   E     D A L   N  K             A   ++L +++    +  +L+
Sbjct: 439 AKLNRQYQEALAFHDRAKLNIINAQK-------------AQIEAQLELVDSQLSRAKLLA 485

Query: 295 PIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           P  G IV  + S       ++ + L ++ P      I   +   +I  V  G    +   
Sbjct: 486 PFEGRIVSGDLSQRLGGAVKKGEVLFEVSPLH-FYRINLSIKESRIADVSVGQEGVLHLS 544

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
              +     F  ++ KI P+   +D       ++ V     + +    +++L+ G     
Sbjct: 545 ALPET---PFDFVVTKITPLTEARD----GATFFVV-----EASLQGQSLQLQPGMEGVG 592

Query: 414 LFTAKNTTLAQ 424
                   L  
Sbjct: 593 KIHIDERNLLS 603


>gi|251791538|ref|YP_003006259.1| secretion protein HlyD family protein [Dickeya zeae Ech1591]
 gi|247540159|gb|ACT08780.1| secretion protein HlyD family protein [Dickeya zeae Ech1591]
          Length = 420

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/337 (13%), Positives = 107/337 (31%), Gaps = 36/337 (10%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           + ++   +    ++    L      + +    L+  ++ + +    RE Q +       S
Sbjct: 37  DGVQAQWVRIEPQLLENQLGLVGQIQATTRMTLSAPFEGVVREVRVREGQHVGKDHILLS 96

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE-----NKSSLLRALLSSHQKDLTMM 202
               +    +      +      ++         E        +  R  LS+ + +L   
Sbjct: 97  LDPALLEIQMRQAQADVLKAQREVQQYRQWEKGAEVSRARRAVANARQELSNTEANLRDT 156

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + LF +  V++ +++   + V     +L     E   +L        +            
Sbjct: 157 QTLFARGIVARMEVDSLTQQVRTQRQDLLTAQEELATVLARGQGEERKI----------- 205

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS-------NY-AQQ 314
                  +    +  ++   LE     + I +P+AG +V   +  +             Q
Sbjct: 206 ------AEMELLNAQARYQALEAMYAHRDITAPVAGFVVRPATPENGRTVMVQPGVQVTQ 259

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
             PL+ ++       + A+V    +  +++G    +    +A    ++    I  I    
Sbjct: 260 GTPLLTLI-GQDRLQVLARVEETDLHLLQEGMPVQITGDGFA---GQELAGHIAAIAVQG 315

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           S+ D        Y+V++ + D   SD    +R G  A
Sbjct: 316 SETDGQSAGAR-YDVVVSV-DSDLSDVKPAIRFGMSA 350



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/158 (10%), Positives = 61/158 (38%), Gaps = 4/158 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +     + + +PF G++++ +V  G  + +   LL+ +       I +++     L+   
Sbjct: 61  IQATTRMTLSAPFEGVVREVRVREGQHVGKDHILLSLDP--ALLEIQMRQAQADVLKAQR 118

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           + ++        +     +A  +  ++L +       T +      ++ +   +     +
Sbjct: 119 EVQQYRQWEKGAEVSRARRAVANARQELSNTEANLRDTQTLFARGIVARM--EVDSLTQQ 176

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
           +R+   + L  + + + + A     ++ +  M+ L  +
Sbjct: 177 VRTQRQDLLTAQEELATVLARGQGEERKIAEMELLNAQ 214


>gi|238025330|ref|YP_002909562.1| MFS efflux pump, membrane fusion protein, EmrA subfamily protein
           [Burkholderia glumae BGR1]
 gi|237879995|gb|ACR32327.1| MFS efflux pump, membrane fusion protein, EmrA subfamily protein
           [Burkholderia glumae BGR1]
          Length = 411

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 76/268 (28%), Gaps = 28/268 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L   +   R+   +      +  L +A LS    DL     L +   VS+
Sbjct: 104 RLALDDAVAQLARAVREYRTARADTAREAAQILLRKAELSKASDDLQRRLGLAQDGGVSR 163

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            DL      +  ++  L             I+    ++N                     
Sbjct: 164 EDLRHARDAMDSASAALDAQQAAYDASRARIDGTSIDSN------------------PLV 205

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +++        +  I +P+AG +   ++     +     P M +VP  +  ++ A 
Sbjct: 206 RAAAARVRSAALALRRTEIRAPLAGLVTR-RAVQVGQHVAPGTPAMALVPL-EHVWVEAN 263

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIR--EKKFKAI-IEKIDPIISQQDNNLQTQ-----E 385
               Q++ +  G   T+R   Y        + + +         S    N         +
Sbjct: 264 FKESQLRGMHAGQAVTLRSDLYGASVVFHGRIEGVEAGTGSAFASVPAQNATGNWIKVVQ 323

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
              V + +       + + +     A V
Sbjct: 324 RVPVRIALDPGELRAHPLRIGLSMNASV 351



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 5/124 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
              +VV++    +G +    V+N   +  G PL   +  +    +D     +        
Sbjct: 63  VTGDVVQVSPQVAGTVDAIMVQNAEWVRAGDPLFRIDPTDARLALDDAVAQLARAVREYR 122

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
               DT + A   L  K ++ + + + +    L   G       +     + S   +L  
Sbjct: 123 TARADTAREAAQILLRKAELSKASDDLQRRLGLAQDGGVSREDLRHARDAMDSASAALDA 182

Query: 167 KLTR 170
           +   
Sbjct: 183 QQAA 186


>gi|228950183|ref|ZP_04112364.1| hypothetical protein bthur0007_62510 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228809481|gb|EEM55921.1| hypothetical protein bthur0007_62510 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 248

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 62/162 (38%), Gaps = 11/162 (6%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           +      ++  +   +    ++ T+ +P  G +  ++ F++ +  +  Q ++ I+P    
Sbjct: 90  EALMQVIEKQGEEGEMNHQNKKITLKAPQDGIVQLHKIFNNGDLIEYGQEVVSIIPKEAK 149

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY- 386
             I+  + P++I  +K+G T       Y+   +   K  + KI    S    + + ++Y 
Sbjct: 150 KKIKILIHPQEIAGIKEGDTVN-----YSFRLKNSTK-QVGKITYKSSYPIFDKEMKDYV 203

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           YE+   I           +  G   +        ++   ++ 
Sbjct: 204 YELEANIDSKELQQ----VYIGMTGKASIVVGEESIWNFVLK 241



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L++  P  +  +    ++  +G++ W  L  +EI    +  +  E ++  +++   GI+ 
Sbjct: 17  LEKKPPRFITWLLGFLLLFFLGVLIWIYLGRMEIVSKGTAIVQGESDIGIVRAQSIGIVD 76

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +  V  G ++ +G  L+           +  +++ +N +  +   +  +  L
Sbjct: 77  EMFVHTGDKVKKGEALMQV----IEKQGEEGEMNHQNKKITLKAPQDGIVQL 124


>gi|6472600|dbj|BAA87057.1| unconventional myosin heavy chain [Chara corallina]
          Length = 2167

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 77/204 (37%), Gaps = 7/204 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E    +       +  +   ++    ++  + K D +++     EEQ+ D + +  S  S
Sbjct: 990  EENSKLKELVEDYEKKKALEESSAKRIEEADLKRDAIQELLNRSEEQVQDLISENQSLQS 1049

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +  N  + +  R L+ +   M+ + L + DL+     L A   + + +   +K   E   
Sbjct: 1050 EKLNLQLDN--RILRQQALSMKDLELEKQDLQRNLQHLEANSQALRAENQTLKQQLE--- 1104

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              Q +    +R +       +    E + +   + +L  +       +L+  S+ L    
Sbjct: 1105 --QLESQDLQRNLQHLEANSQALRAENQTLKYQLEQLESQDLQRDLQHLEANSQALRAEN 1162

Query: 271  RTFADEMSKLTILEKTREQKTILS 294
            +T   ++ +L   +  R  + + +
Sbjct: 1163 QTLKQQLEQLESQDLQRNLQHLEA 1186



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 73/216 (33%), Gaps = 14/216 (6%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
              L   E  +    +   + + + LR    T       L  + + LE     R+ Q L+ 
Sbjct: 1101 QQLEQLESQDLQRNLQHLEANSQALRAENQT-------LKYQLEQLESQDLQRDLQHLEA 1153

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              +     ++     +  +          ++ +  N   L  ++  L+  L         
Sbjct: 1154 NSQALRAENQTLKQQLEQLESQ--DLQRNLQHLEANSQALRAENQTLKQQLEQLTSKGGT 1211

Query: 202  MKNLFEKNAVSQNDLNQQERIVYK---STLELRENIHEQKNMLRHINELYDEANLEFANY 258
            +  L    A S+ D+++ E  + +   +    +    E + +   + +L  +       +
Sbjct: 1212 V--LKIGGASSKFDISEPEPAIGETEFTEANSQALRAENQTLKYQLEQLESQDLQRNLQH 1269

Query: 259  LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            L+  S+ L    +T   ++ +L   +  R  + + +
Sbjct: 1270 LEANSQALRAENQTLKQQLEQLESQDLQRTLQHLEA 1305



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 87/258 (33%), Gaps = 45/258 (17%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL-------------NNKYDVLE 128
              L   E  +    +   + + + LR    T K  L+ L             ++K+D+ E
Sbjct: 1286 QQLEQLESQDLQRTLQHLEANSQALRAENQTLKQQLEQLTSKGGTVLKIGGASSKFDISE 1345

Query: 129  KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS----------------------LKM 166
                  E +  +   +     ++     +  +                         LK 
Sbjct: 1346 PEPAIGETEFTEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQALRAENQTLKQ 1405

Query: 167  KLTRMRSIYLNR--LDLENKSSLLRALLSSHQKDLTMMKN-----LFEKNAVSQNDLNQQ 219
            +L ++ S  L R    LE  S  LRA   + ++ L  + +     L    A S+ D+ + 
Sbjct: 1406 QLEQLESQDLQRNLQHLEANSHALRAENQTLKQQLEQLTSKGGTVLKIGGASSKFDIREP 1465

Query: 220  ERIVYK---STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            E  + +   +    +    E + + + + +L  +       +L+  S+ L    +T   +
Sbjct: 1466 EPAIGETEFTEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQALRAENQTLKQQ 1525

Query: 277  MSKLTILEKTREQKTILS 294
            + +L   +  R  + + +
Sbjct: 1526 LEQLESQDLQRNLQHLEA 1543



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 73/238 (30%), Gaps = 25/238 (10%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK--------YDVLEKAFES 133
              L   E  +    +   + + + LR    T K  L+ L ++         +    A  +
Sbjct: 1372 QQLEQLESQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSHALRA 1431

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSV---YRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              + L   L +  S    V   G +S     R  +  +        N   L  ++  L+ 
Sbjct: 1432 ENQTLKQQLEQLTSKGGTVLKIGGASSKFDIREPEPAIGETEFTEANSQALRAENQTLKQ 1491

Query: 191  LLSSHQKD---------LTMMKNLFEKNAVSQNDLNQQE-----RIVYKSTLELRENIHE 236
             L   +               + L  +N   +  L Q E     R +       +    E
Sbjct: 1492 QLEQLESQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQHLEANSQALRAE 1551

Query: 237  QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             + + + + +L  +       +L+   + L     T   ++ +L   +  R  + + +
Sbjct: 1552 NQTLKQQLEQLESQDLQRNLQHLEAKCQALRAENETLKQQLEQLESQDLQRNLQHLEA 1609



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 75/219 (34%), Gaps = 5/219 (2%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q   LL  E       +   KV+   L    +    A   + +K + L +     +E
Sbjct: 939  QVEQMKILLAKEREGHEADLAQAKVAAAQL-LEAEMSAQASKEVLDKVEALSEENSKLKE 997

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             + D+  K     S       + + R    +L       +  L  EN+S     L     
Sbjct: 998  LVEDYEKKKALEESSAKRIEEADLKRDAIQELLNRSEEQVQDLISENQSLQSEKLNLQLD 1057

Query: 197  KDLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              +   + L  K+  + + DL +  + +  ++  LR      K  L  +     + NL+ 
Sbjct: 1058 NRILRQQALSMKDLELEKQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQDLQRNLQH 1117

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                 +    L    +T   ++ +L   +  R+ + + +
Sbjct: 1118 LEANSQA---LRAENQTLKYQLEQLESQDLQRDLQHLEA 1153



 Score = 43.1 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 48/140 (34%), Gaps = 4/140 (2%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
              L   E  +    +   + + + LR    T K  L+ L ++   L++  +  E      
Sbjct: 1491 QQLEQLESQDLQRNLQHLEANSQALRAENQTLKQQLEQLESQD--LQRNLQHLEANSQAL 1548

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL--LSSHQKDL 199
              +  +   ++       + R+L+    + +++      L+ +   L +     + Q   
Sbjct: 1549 RAENQTLKQQLEQLESQDLQRNLQHLEAKCQALRAENETLKQQLEQLESQDLQRNLQHLE 1608

Query: 200  TMMKNLFEKNAVSQNDLNQQ 219
               + L  +N   +  L Q 
Sbjct: 1609 ANSQALRAENQTLKQQLEQL 1628


>gi|220909921|ref|YP_002485232.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 7425]
 gi|219866532|gb|ACL46871.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           7425]
          Length = 426

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/331 (12%), Positives = 109/331 (32%), Gaps = 39/331 (11%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                E  +    N     ++ A     +          +   +          + L + 
Sbjct: 32  ARPTVEGQSSAAQNQDGIPVDVAIARLAQLESPRSYTGTTRPRREIALRSQIEAQLLNLS 91

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           +     +   ++  +  ++LLRA +   Q +L   ++   +   ++  +N+    V +S 
Sbjct: 92  VDVGDRVRQGQILAQLDNALLRAEVIQAQSELAARRSEVVQ---AETQVNRSRTAVEQSR 148

Query: 228 LELRENIHEQKNMLRHINELYDEANL----------------EFANYLKEISRDLEQNQR 271
           L L++   + + + + + E      L                     ++   + ++  Q+
Sbjct: 149 LALQQAQSDAQRLEQLLKEGATSQQLTEQAQTAAQTAQQVLQSTQAEVRTAQQAVQVAQK 208

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               + + +   ++      + SPI G ++  +     N  +  + ++++     L+ I+
Sbjct: 209 RVKAQAALVAQSQERLSYAIVTSPITGVVLQ-RVTEPGNLLRPGEEILQL---GDLSQIK 264

Query: 332 AKVTPKQIQ--HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
             VT  +++  +++ G  A VR           F   I +I P                 
Sbjct: 265 VVVTVSELELRNLRPGQAAQVRLDALGQT---SFAGTISRISPAADPT-----------A 310

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            L   ++  ++ +  + +G  A V F     
Sbjct: 311 RLVPIEIILNNPDARIGSGLLARVEFATAER 341



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/136 (11%), Positives = 45/136 (33%), Gaps = 5/136 (3%)

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR-----CHIDTEKSALDFLNNKY 124
             V+ G ++ QG  L   ++      +   +  +   R           +S      ++ 
Sbjct: 90  LSVDVGDRVRQGQILAQLDNALLRAEVIQAQSELAARRSEVVQAETQVNRSRTAVEQSRL 149

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + +   +++  + L   G      ++       +  + L+     +R+        + +
Sbjct: 150 ALQQAQSDAQRLEQLLKEGATSQQLTEQAQTAAQTAQQVLQSTQAEVRTAQQAVQVAQKR 209

Query: 185 SSLLRALLSSHQKDLT 200
                AL++  Q+ L+
Sbjct: 210 VKAQAALVAQSQERLS 225


>gi|257093348|ref|YP_003166989.1| secretion protein HlyD family protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257045872|gb|ACV35060.1| secretion protein HlyD family protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 380

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 85/270 (31%), Gaps = 20/270 (7%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             ++  +R D E+    + A +++ +     ++        +  D  +QE +  +    +
Sbjct: 102 QIALQRSRSDYESVRRSVNASVATVEAARASLQAAQANQIKADKDATRQEALYAEDPGAI 161

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                E     R      ++A        +E + D   +        S     E    + 
Sbjct: 162 SVRRLEVAQATRIEAHSKEKAAEADLRKAQEAAGDAGDDNAQLRSARSATEKAELDLART 221

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            +++P  G +   ++    ++AQ   P M ++      +I A +T   + ++  G    +
Sbjct: 222 RVVAPGRGLVTDLRTD-VGHFAQAGTPAMTLIAIHD-LWINADMTENNLGNIDPGDEVAI 279

Query: 351 RFPHYADIREKKFKAIIEKID--------------PIISQQDNNLQTQEYYEVILKITDL 396
                  +  +  K  +  I               P I    + L+  + + V ++    
Sbjct: 280 VL---DVLPGEVLKGRVRSIGSGVSSGQQAQAGTLPTIQNSRDWLRQAQRFPVTVEFDAA 336

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
                      G  AEV+    +  +   +
Sbjct: 337 ERERLQRVRIGG-QAEVMVFTGDNFVMNLL 365



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/299 (10%), Positives = 93/299 (31%), Gaps = 23/299 (7%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +    + +  I   + W      +     + +   +  VV + +  +G +    V+N   
Sbjct: 29  RVGATIVLALIAASLLWYFAA--DRLTPHTSQARVQAFVVPVATEVAGKVLAVHVKNNDN 86

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G PL   +  +    +   +   +++R  ++   + ++                  Q
Sbjct: 87  VQHGQPLFDIDPSQYQIALQRSRSDYESVRRSVNASVATVEAARASLQA---------AQ 137

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                    +T  +             ++++ +   I  +  +   ++ L +A  ++   
Sbjct: 138 ANQIKADKDATRQEALYAEDPGAISVRRLEVAQATRIEAHSKEKAAEADLRKAQEAAGDA 197

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                +    ++A  + +L+       +     R  + + +  + H  +    A    A 
Sbjct: 198 GDDNAQLRSARSATEKAELDLAR---TRVVAPGRGLVTDLRTDVGHFAQAGTPAMTLIAI 254

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           +   I+ D+ +N     D   ++ I+              G ++  +  S  +     Q
Sbjct: 255 HDLWINADMTENNLGNIDPGDEVAIVLDVLP---------GEVLKGRVRSIGSGVSSGQ 304


>gi|190573998|ref|YP_001971843.1| putative HlyD family secretion protein [Stenotrophomonas
           maltophilia K279a]
 gi|190011920|emb|CAQ45541.1| putative HlyD family secretion protein [Stenotrophomonas
           maltophilia K279a]
          Length = 383

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 72/205 (35%), Gaps = 21/205 (10%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E+       +   + +V       R  + + +  +R +   Y  A  +        + 
Sbjct: 94  LVEEG----QRVTAGQPLVRLDPDRARLAVAQSEAQMRKLENNYQRAQ-KLVGQQMVSAA 148

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           D++Q +    +  ++  +        T+++PI+G I      +  N+ Q + P+ +IV  
Sbjct: 149 DVDQLRFDLENVRAQYRLATLELSYTTVVAPISGVIASRSIKT-GNFVQINTPIFRIV-D 206

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +        V  +++  ++ G   T+       +  + F   +++I P++       +  
Sbjct: 207 NSRLEATLNVPERELATLRAGQPVTL---AADALPGQSFTGTVDRIAPVVDSGSGTFRVV 263

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
                       AF      L+ G 
Sbjct: 264 S-----------AFDGAAHALQPGM 277



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 51/159 (32%), Gaps = 2/159 (1%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  +        + +  SG+     VE G ++  G PL+  +       +   +  ++
Sbjct: 69  TGTAALEPRAESQVV-AKTSGVALAVLVEEGQRVTAGQPLVRLDPDRARLAVAQSEAQMR 127

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    +  +         +++     E     +               IS V  S 
Sbjct: 128 KLENNYQRAQKLVGQQMVSAADVDQLRFDLENVRAQYRLATLELSYTTVVAPISGVIASR 187

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +K      I      + +  S L A L+  +++L  ++
Sbjct: 188 SIKTGNFVQINTPIFRIVDN-SRLEATLNVPERELATLR 225


>gi|194335884|ref|YP_002017678.1| efflux transporter, RND family, MFP subunit [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308361|gb|ACF43061.1| efflux transporter, RND family, MFP subunit [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 322

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SVS++G +  +  V  I+S   G I+   VE G  + +G  L      E   L+D  
Sbjct: 46  ISSSVSTTGAVEPQTRVK-IQSSVGGRIEAILVEEGQLVKKGEVLAMLSSTERAALLDAA 104

Query: 100 KVS 102
           K+ 
Sbjct: 105 KLQ 107



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 26/210 (12%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL--- 283
            +E +  +  Q ++   I  +  E          E+   L   +R    + +KL      
Sbjct: 55  AVEPQTRVKIQSSVGGRIEAILVEEGQLVK--KGEVLAMLSSTERAALLDAAKLQGKSEQ 112

Query: 284 ---EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              +K  ++  +++P+ G ++  +S         +  L  +   S    ++A V    I 
Sbjct: 113 SYWQKVYKETAVIAPMTGQVI-VRSVDPGQTVTTNDSLFVL---SDRLLVKAYVDETDIG 168

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            VK G  A +    Y +IR      ++  I      Q+N       Y V +    +    
Sbjct: 169 RVKVGQRAVIGLDAYPEIR---VNGVVHHIYYESHLQNNVNI----YNVDVVPDRIPDV- 220

Query: 401 NNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
                R+G  A V    +  +    ++ P+
Sbjct: 221 ----FRSGMSANVRIIVQEKS--NALLLPL 244


>gi|325577244|ref|ZP_08147728.1| multidrug resistance protein A [Haemophilus parainfluenzae ATCC
           33392]
 gi|325160826|gb|EGC72947.1| multidrug resistance protein A [Haemophilus parainfluenzae ATCC
           33392]
          Length = 389

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 88/287 (30%), Gaps = 37/287 (12%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q  D L +   T +K+      S   +L   + ++  +      L++        L+  Q
Sbjct: 83  QAGDVLLELDDTNAKLSFEQAKS---NLANAVRQISQLNYTVKQLKSAVRANEITLAQVQ 139

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +L     L +  A+ +      +  V  +   L  + ++ +     +            
Sbjct: 140 GNLNRRVQLVKDGAIDKESFQHAKEAVELAKANLTTSQNQLEANQALL------------ 187

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                +   L + Q      +S L       E+  I SPI G +   ++           
Sbjct: 188 -----LDGPLSE-QPQIQSAVSNLKQAWLNLERTKIRSPIKGYVAR-RNAQVGQAVSVGG 240

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----D 371
            LM +V  +   ++ A     Q+ H++ G    + F  Y   +   F   +  I      
Sbjct: 241 ALMAVV-TTDQMWLDANFKETQLTHMRIGQPVEIYFDLYGKDKT--FNGKVVGIEMGTGS 297

Query: 372 PIISQQDNNLQTQ-----EYYEVILKITDLAFSDNNIELRNGFPAEV 413
                   N         +   V +++      +N + +  G  A V
Sbjct: 298 AFSLLPTQNATGNWIKVVQRVPVRIQLDPQQLIENPLRI--GLSATV 342


>gi|307267046|ref|ZP_07548560.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306917926|gb|EFN48186.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 603

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 55/164 (33%), Gaps = 24/164 (14%)

Query: 261 EISRDLEQNQRTFADEMSKLTILEK----TREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           +++  LEQ +        +L    +    +     I SP +G I+ +             
Sbjct: 93  DLNNQLEQAKINLNLAEQQLNQDTQNYNSSIANLNITSP-SGGIIDSILVKEGQNVTPGT 151

Query: 317 PLMKIVPHSKLTYIRAKVTPK--QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           P+  I   +  +++  KV     QI+++K G  A +    Y           +E +    
Sbjct: 152 PVATI---ADYSHVTVKVPFNGVQIKNIKVGQKADIFL--YDSFTT--VTGTVEYVS--- 201

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            +Q     T +YY V + + +     +      G   +V     
Sbjct: 202 -EQPVPNNTVQYYYVTVGLDNPGALSD------GMRVQVSIHTD 238



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 56/445 (12%), Positives = 135/445 (30%), Gaps = 78/445 (17%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I + V+ +G +    +V  I    SG +KK   + G  + +G  L   ED +  + ++
Sbjct: 42  GNISMKVTGTGNL--NGDVRAITLKGSGTVKKVYFKVGDTVKKGDLLYEIEDDDLNNQLE 99

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K+++      ++ +    +      ++   +    +  L+                  
Sbjct: 100 QAKINLNLAEQQLNQDTQNYNSSIANLNITSPSGGIIDSILVKEGQNVTPGTPVATIADY 159

Query: 158 SSVYRSLKMKLTRMRSIYLNRLD---LENKSSLLRALLSSHQKD---------LTMMKNL 205
           S V   +     ++++I + +     L +  + +   +    +            +   L
Sbjct: 160 SHVTVKVPFNGVQIKNIKVGQKADIFLYDSFTTVTGTVEYVSEQPVPNNTVQYYYVTVGL 219

Query: 206 FEKNAVS---QNDL-----NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-- 255
               A+S   +  +     N  E  +   TL  +  ++        ++++Y         
Sbjct: 220 DNPGALSDGMRVQVSIHTDNGIETALEDGTLTAKNTVNVTAQTSGTVDKIYISQGQSVKK 279

Query: 256 --------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                   ++ +  +   +E ++    +  +    + +      I SPI G I+      
Sbjct: 280 GQLLIKLSSDNISNLQMQIENDKLKVMEAQNNYNQILQQINNLKIYSPIDGKIISQNIN- 338

Query: 308 SSNYAQQS------------------QPLMKIV--------PH------SKLTYIRAKVT 335
             +    S                   P++ I         P       +    I   V 
Sbjct: 339 EGDILGTSVASTNISNTNSQSQQSSFVPVLDITQLSTYESQPETAVIANNDKYIINLSVD 398

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              I+H+K G  A +      D+ +K F   + ++  + + Q+        Y VI+++  
Sbjct: 399 ETDIKHIKVGQQAQI---TTDDLPDKTFTGTVSEVSQLPTIQNGVSS----YNVIIEVDP 451

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNT 420
                    L  G    V       
Sbjct: 452 SE------GLMLGMSMNVSIIVAEK 470


>gi|317054448|ref|YP_004118473.1| efflux transporter, RND family, MFP subunit [Pantoea sp. At-9b]
 gi|316952443|gb|ADU71917.1| efflux transporter, RND family, MFP subunit [Pantoea sp. At-9b]
          Length = 377

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 51/127 (40%), Gaps = 4/127 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  + + +++ G ++  + V +I+S  +G +K    + G  + +G  L T +D     
Sbjct: 48  ATVQALPVVLTTQGHVVPLNQV-DIQSQITGTVKTVAFKEGDFVKKGQLLFTLDDASQRA 106

Query: 95  LIDLKKVSIKNLRCHIDTEKSALD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             +    ++   +  +   +  LD    L  K  +    +++ +  L  +  +  +    
Sbjct: 107 AYNHALAAVGESQALLVKAQHDLDRSRALKAKNYISMSDWDTLQSALQQYQAQLKAAQED 166

Query: 152 VFNYGIS 158
           V    ++
Sbjct: 167 VRTADVN 173



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 80/246 (32%), Gaps = 38/246 (15%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           LN++D++++ +     ++  + D        +K  +     +  +R  Y   L     + 
Sbjct: 66  LNQVDIQSQITGTVKTVAFKEGDF------VKKGQLLFTLDDASQRAAYNHAL---AAVG 116

Query: 236 EQKNMLRHINELYDEAN-LEFANYLK-----EISRDLEQNQRTFADEMSKLTILEKTREQ 289
           E + +L       D +  L+  NY+       +   L+Q Q         +   +     
Sbjct: 117 ESQALLVKAQHDLDRSRALKAKNYISMSDWDTLQSALQQYQAQLKAAQEDVRTADVNLGY 176

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIV---PHSKLTYI-RAKVTPKQIQHVK 343
             I +P+ G           +  Q     PL+ ++   P      +    ++P     +K
Sbjct: 177 TRIYAPVDGKTGALNIH-PGSLVQPGSTLPLVTLIQFDPIGMSFTLPEQDLSPVLRAQMK 235

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
                T+      +   K+    ++ ID  +S     +                F++ ++
Sbjct: 236 S--QVTIWV---QNASGKRVAGTLDFIDNSVSTDSGTIAL-----------KARFNNVDM 279

Query: 404 ELRNGF 409
           +L  G 
Sbjct: 280 QLWPGM 285


>gi|212635684|ref|YP_002312208.1| multidrug resistance efflux pump [Shewanella piezotolerans WP3]
 gi|212557168|gb|ACJ29622.1| Multidrug resistance efflux pump, putative [Shewanella
           piezotolerans WP3]
          Length = 346

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 99/265 (37%), Gaps = 30/265 (11%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             I++    L+  L R+ +   ++  +E  + +L+A     Q  L + K   +    ++ 
Sbjct: 99  SAIANKIEQLEASLLRVTAQEQSQ-SIELDAQILQAEFDLKQARLELEKADLDAGIPAK- 156

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                +        +L+ N  E    ++ + E+ D+     A    + +R L++ +++  
Sbjct: 157 -YIAAKDYADNQFNKLKAN-SELSKKVQSLKEITDKRVASIAQLHIDKTRALKELEQSL- 213

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVY------NQSFSSSNYAQQSQPLMKIVPHSKLT 328
                     K  +Q  I S I G I+Y      ++ F+  +  Q  + +  I P  K  
Sbjct: 214 ----------KGLDQLEITSTINGPILYGRDPWSDKKFAVGDSVQIGRQVATI-PAMKEL 262

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            + A V    +  +K G   ++R               I+ I    ++Q     +  +  
Sbjct: 263 EVIAWVNEVDVDRLKIGDAVSLRL---DSQPSTSLSGAIQGISRQATKQTAWGSSNWF-- 317

Query: 389 VILKITDLAFSDNNIELRNGFPAEV 413
             ++IT    SD+ +++  G    V
Sbjct: 318 -RVEIT--FTSDDRVKIIPGMSVLV 339


>gi|171060377|ref|YP_001792726.1| RND family efflux transporter MFP subunit [Leptothrix cholodnii
           SP-6]
 gi|170777822|gb|ACB35961.1| efflux transporter, RND family, MFP subunit [Leptothrix cholodnii
           SP-6]
          Length = 437

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 43/143 (30%), Gaps = 14/143 (9%)

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPK 337
           L+  E    + +I SPI G ++       +  A   Q   L  +        +   V   
Sbjct: 202 LSTDETNLGRASIRSPIDGVVLTRSVDPGNAVAASLQAVTLFTLAEDLTQLQLSVNVDEA 261

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  V+ G +A+     +A  R       +     +               V+   T L+
Sbjct: 262 DVAQVQDGQSASFTVSAWAGRRYPATVTRVAYGSTLTDN------------VVTYTTLLS 309

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
             + ++ LR G  A         
Sbjct: 310 VDNADLSLRPGMTAVATIATNER 332



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 22/138 (15%)

Query: 14  PASLKRMTLL----SIIGIIGLITWSILLP-----------------IEISVSSSGEILN 52
           P+  +R         +I   G   W    P                 + ++V+++G+I  
Sbjct: 24  PSRWRRSVPWLIGTVLIAAAGAGLWFAFGPSQTAPVRYTTEPLARGDLALTVTANGKIQP 83

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
             +V  I S  SGI+ + +V+   ++ +G  L+  +  +  D I   + S+   +  +  
Sbjct: 84  TRSV-SIGSELSGIVARVRVDVNDRVKKGQVLVELDTAKLLDQITRTRASLAAAQAGVAQ 142

Query: 113 EKSALDFLNNKYDVLEKA 130
             +A          LE+ 
Sbjct: 143 AAAAAKESRANLARLEEV 160


>gi|91224030|ref|ZP_01259293.1| Multidrug resistance efflux pump [Vibrio alginolyticus 12G01]
 gi|91190941|gb|EAS77207.1| Multidrug resistance efflux pump [Vibrio alginolyticus 12G01]
          Length = 407

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/386 (12%), Positives = 122/386 (31%), Gaps = 85/386 (22%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS--- 64
           N      A L  +  L  + +  +       P++    S G ++   ++     P S   
Sbjct: 23  NKATKSFAYLGGLGWLMFVWVGLI----NFTPMD---LSGGSVVQSPHIQL--RPDSTNV 73

Query: 65  -GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    +E   ++ +G  +   +  +    ++   VS  + R  + T K  ++     
Sbjct: 74  KGKVDHIYIEPNQKVKEGQLIYELDPTQYKIALNQANVSADSARVALATAKGDIEIEEAN 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           ++ L +  E+ + QL           +   +Y +        ++  R+    +   D++ 
Sbjct: 134 HEALVQDLETSKSQL----------EAAKVDYKLQKKMLDRYVEQNRVVHNTITESDIDK 183

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +SS +                      ++++++   E  + K  +++             
Sbjct: 184 QSSAVD---------------------MARHNVLTLESQIKKKQVDI-----------SR 211

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                 +A L       E+ +              ++   +       + +P  G +   
Sbjct: 212 AKLAIHKAELAVETKQAELRQA-----------EEQIAKAQWDLNSTKVHAPTDGFVTN- 259

Query: 304 QSFSSSNYAQQSQPLMKIVPH----SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
                    ++ Q +  ++P     +   Y+  +V  + I+++K G  A      ++   
Sbjct: 260 ------FILREGQRV-SMMPRINMYTNEKYVLMRVNHQAIRNIKPGQPAE-----FSSSV 307

Query: 360 EKK--FKAIIEKIDPIISQQDNNLQT 383
                F A +E I     +   NL  
Sbjct: 308 YPGKIFSATVEGIVEATGESQGNLLG 333


>gi|163849275|ref|YP_001637319.1| RND family efflux transporter MFP subunit [Chloroflexus aurantiacus
           J-10-fl]
 gi|222527269|ref|YP_002571740.1| RND family efflux transporter MFP subunit [Chloroflexus sp.
           Y-400-fl]
 gi|163670564|gb|ABY36930.1| efflux transporter, RND family, MFP subunit [Chloroflexus
           aurantiacus J-10-fl]
 gi|222451148|gb|ACM55414.1| efflux transporter, RND family, MFP subunit [Chloroflexus sp.
           Y-400-fl]
          Length = 523

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/326 (12%), Positives = 104/326 (31%), Gaps = 29/326 (8%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFE---------DIETTDLIDLKKVSIKNLRCHIDTE 113
            SGI++   +E G+Q+  G  L   +           +     D + +     R  I+  
Sbjct: 94  ESGILRNLYIEVGAQVTTGQLLAEIDLGTLEDRLRQAQINAEQDRRAIDQAVARAQIEVR 153

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS------VYRSLKMK 167
            + +     +  + E    +   ++ +         + +      +        R+L  +
Sbjct: 154 AAEVALETAQDRLAELTTPASATEIAEARAALQRAEAALARTRNDASAVKTRAERALADR 213

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV--SQNDLNQQERIVYK 225
           +  ++ +         +  +          D   ++    ++AV  +Q +L+        
Sbjct: 214 VAELQRVQAAYGQARARLEVEDTPEVRALVDRLTVELQAAESAVALAQIELDTARGNEIA 273

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT-----------FA 274
           +      ++   +  L  +    D+  +  A    E ++      R             A
Sbjct: 274 AVQAAEADVALARARLDRLLNGADQFEITAARRAVEQAQIQLDAARQRATPDPLLVKSLA 333

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                +  +E+  E + I +P  G+I    +       Q   P+++++ +S L    + V
Sbjct: 334 ASELMIKEIERQIEARRIYAPFDGSITAIDAL-VGFPVQAEMPVIRLMDNSGLQITISAV 392

Query: 335 TPKQIQHVKKGYTATVRFPHYADIRE 360
           +   ++ +  G   T+ F  Y     
Sbjct: 393 SSTDLERISDGTPVTISFVRYPGRTF 418


>gi|332300126|ref|YP_004442047.1| efflux transporter, RND family, MFP subunit [Porphyromonas
           asaccharolytica DSM 20707]
 gi|332177189|gb|AEE12879.1| efflux transporter, RND family, MFP subunit [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 370

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 70/219 (31%), Gaps = 24/219 (10%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             A SQ ++ +      +   ++   +H+Q  +        +E     ANYL +    L 
Sbjct: 104 NQAESQVEIAKIALDEAEQKYKIATELHQQGIV------AEEEYATTKANYL-QAKERLA 156

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ-----QSQPLMKIV 322
             +  +   ++ ++          + S + GTI+       ++  Q         +  I 
Sbjct: 157 SAKDAYNIVLTGMSQRNAQGSTTLVRSTVDGTILDIPVKEGNSVIQANSFNAGTTIATIA 216

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                     KV    I  V  G   TVR      I    F  ++E I P   QQ    Q
Sbjct: 217 -DMTEMIFIGKVDEVDIARVATGLPVTVRIGA---IEGSAFSGVVEYISPKTIQQQQGTQ 272

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
               YE+   IT     D+   +R+   A         +
Sbjct: 273 ----YELKAAIT----IDDYSRIRSDMSANAELITDQVS 303



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 44/112 (39%), Gaps = 4/112 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+ S+  +G+I   + V+ +     GII +   + G  +  G  +   + +     ++  
Sbjct: 48  IQRSIILTGKIAPRNEVMIVPQLN-GIIAEIMKKPGDLVKAGDIIARIKVVPEMGSVNQA 106

Query: 100 KVSIKNLRCHIDTEKSA---LDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +  ++  +  +D  +        L+ +  V E+ + + +   L    +  S 
Sbjct: 107 ESQVEIAKIALDEAEQKYKIATELHQQGIVAEEEYATTKANYLQAKERLASA 158


>gi|300778595|ref|ZP_07088453.1| multidrug resistance protein A [Chryseobacterium gleum ATCC 35910]
 gi|300504105|gb|EFK35245.1| multidrug resistance protein A [Chryseobacterium gleum ATCC 35910]
          Length = 354

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 86/285 (30%), Gaps = 27/285 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL    + +    K     +   Y  LK+  +   +         ++    +A +   + 
Sbjct: 81  LLIIDNREYVLQEKQTQAALRKAYAQLKVLESTTETTEKEAAAAMDQVDANKAKVWKQKL 140

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D    K L+++ + ++  L   +  +  +  + R +       +  IN            
Sbjct: 141 DYNRYKKLYDEESATRQRLEDVKATLDINESDYRSSQDNYAASMSKIN------------ 188

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
              +I  +        A   + L   +       + +   G +   ++          + 
Sbjct: 189 ---DIRAEKTVVLAEIARLEALLDRHKLDVSYTAVTAAYDGRM-GRRTVEVGQMIDAGET 244

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L  IV +    ++ A     QI+ +  G    +    Y D    +FK  I  + P     
Sbjct: 245 LAFIVNNETDKWVVANYKETQIKDMHIGDHVKIVADSYPDR---EFKGTIISLSPATGSS 301

Query: 378 ----DNNLQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVL 414
                 +  T  Y +++ +I      D   +    L+ G    V 
Sbjct: 302 FSLLPPDNSTGNYVKIVQRIPVRIRVDGQRKDIDILKVGMNVNVY 346



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/354 (12%), Positives = 114/354 (32%), Gaps = 43/354 (12%)

Query: 18  KRMTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           K    +S+  +  L  W           E +  +      ++ V  I S   G I   + 
Sbjct: 14  KITGWISLAIVAALAVWGGFTLKNYYAYEQTNDAQ----VQEYVNPIISRAGGFIVAVKF 69

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           E   ++ +G  LL  ++ E        + +++     +   +S  +    +        +
Sbjct: 70  EENQEVKKGDTLLIIDNREYVLQEKQTQAALRKAYAQLKVLESTTETTEKEAAAAMDQVD 129

Query: 133 SREEQLLDFLGKYHS-----TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           + + ++      Y+               +  V  +L +  +  RS   N     +K + 
Sbjct: 130 ANKAKVWKQKLDYNRYKKLYDEESATRQRLEDVKATLDINESDYRSSQDNYAASMSKIND 189

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           +RA  +    ++  ++ L +++        + +      T      +  +   +  + + 
Sbjct: 190 IRAEKTVVLAEIARLEALLDRH--------KLDVSYTAVTAAYDGRMGRRTVEVGQMIDA 241

Query: 248 YDEANLEFANYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTI------LSPIAGTI 300
            +       N   + +  + ++ Q         + I+  +   +        LSP  G+ 
Sbjct: 242 GETLAFIVNNETDKWVVANYKETQIKDMHIGDHVKIVADSYPDREFKGTIISLSPATGSS 301

Query: 301 VYNQ--SFSSSNYAQQSQPLMKIVPHSKLTYIRAKV--TPKQIQHVKKGYTATV 350
                   S+ NY +    +++ +P      +R +V    K I  +K G    V
Sbjct: 302 FSLLPPDNSTGNYVK----IVQRIP------VRIRVDGQRKDIDILKVGMNVNV 345


>gi|41054798|ref|NP_957334.1| differentially expressed in FDCP 6 homolog [Danio rerio]
 gi|82240229|sp|Q7SYB5|DEFI6_DANRE RecName: Full=Differentially expressed in FDCP 6 homolog
 gi|32766403|gb|AAH54935.1| Zgc:63721 [Danio rerio]
 gi|94732738|emb|CAK11143.1| novel protein (zgc:63721) [Danio rerio]
          Length = 612

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 76/214 (35%), Gaps = 8/214 (3%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           L  +  +  +  + ++ + +     +   +   +    + ++L++A    +  L     +
Sbjct: 320 LKLKRRDQREQREKRREAKEQELQRLRALQEERERKMAELELLKEAQRQAQAMLEQDEQR 379

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 ++       +  + + + +    + L   + E + + +R L +  Q+    ++ 
Sbjct: 380 RRQQHEQLHQALEIQLKEAEEARASMQAEMALKEAEAEKQRTRIRELEAMQQRLEDALQQ 439

Query: 205 LFEKN------AVSQNDLNQQERIVYKSTLELRENIHE-QKNMLRHINELYDEANLEFAN 257
             +          +Q  L  +E    K+ + LRE   E  +   R   EL  E   + + 
Sbjct: 440 EIKARQDEEAFRYAQARLLAEEEEKMKALMGLREEQEEYIQRAQREKQELRQEMESK-SR 498

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            L+E  R LE+ +         +   ++   Q +
Sbjct: 499 ALEEAQRQLEETRANRYRVDQDVVAAQRKLRQAS 532



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 10/150 (6%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNL 205
            T  +++  G +S+++ LK+K    R     R +  E +   LRAL    ++ +  ++ L
Sbjct: 303 QTAIRLYVEGKTSLHKDLKLKRRDQREQREKRREAKEQELQRLRALQEERERKMAELELL 362

Query: 206 FEKNAVSQNDL------NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            E    +Q  L       +Q+       LE++    E+            EA  E     
Sbjct: 363 KEAQRQAQAMLEQDEQRRRQQHEQLHQALEIQLKEAEEARASMQAEMALKEAEAEKQRTR 422

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               R+LE  Q+   D + +     +  E 
Sbjct: 423 ---IRELEAMQQRLEDALQQEIKARQDEEA 449



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 42/143 (29%), Gaps = 4/143 (2%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++                T +R     +  L     L R      Q++    +   ++  
Sbjct: 286 ELSASDTKQRQEWTTAIQTAIRLYVEGKTSLHKDLKLKRR----DQREQREKRREAKEQE 341

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + +    Q+ER    + LEL +    Q   +   +E       E  +   EI     +  
Sbjct: 342 LQRLRALQEERERKMAELELLKEAQRQAQAMLEQDEQRRRQQHEQLHQALEIQLKEAEEA 401

Query: 271 RTFADEMSKLTILEKTREQKTIL 293
           R        L   E  +++  I 
Sbjct: 402 RASMQAEMALKEAEAEKQRTRIR 424


>gi|258514832|ref|YP_003191054.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257778537|gb|ACV62431.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 435

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/388 (12%), Positives = 112/388 (28%), Gaps = 90/388 (23%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  SV ++G +    +  +I +  S IIKK  V+ G  + +G  +   E  E  + +  
Sbjct: 54  PLGESVFTTGRVQLV-DRHDIYAQSSKIIKKLTVKPGDMVKKGQIIGRLESSEEENRLKE 112

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  +     +                                           +N    
Sbjct: 113 AEAGLALQIAN-------------------------------------------YNKDKQ 129

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            + R ++    ++R       +   K      LL              ++N VS  DL  
Sbjct: 130 PLIREVEAWRAKLRQFETAYSNARKKLDRTEYLL--------------KQNVVSIQDLEN 175

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            ++    +  E  + + +         +   E           +   +E+ +       +
Sbjct: 176 DKKEFTAAEAEYFQAMADLDKAENGATDAELEV----------LQAQVEKARAEVETARA 225

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY--IRAKVTP 336
            L     T ++        G ++  ++        +   L+ I          ++A +  
Sbjct: 226 SLAKCLLTVDR-------DGMVLTVEA-EKGTLVTEGTKLVAI---GDPNVSEVKANLGE 274

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
                VK G    +      +    +F   + ++       + N   Q   EV +K++  
Sbjct: 275 ADSGRVKPGQKVKITAAALPEA---EFDGTVTEVAGAAVINNKNNGQQI--EVPIKVS-- 327

Query: 397 AFSDNNIELRNGFPAEV-LFTAKNTTLA 423
             +     L+ G+  ++ + T    T  
Sbjct: 328 -INPGLNGLKPGYTVDLKIITVTERTAL 354


>gi|224025114|ref|ZP_03643480.1| hypothetical protein BACCOPRO_01848 [Bacteroides coprophilus DSM
           18228]
 gi|224018350|gb|EEF76348.1| hypothetical protein BACCOPRO_01848 [Bacteroides coprophilus DSM
           18228]
          Length = 343

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 61/199 (30%), Gaps = 17/199 (8%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            +   + I     L ++ +    K  L    + Y     E  +          + Q    
Sbjct: 80  RVTSGQLIAELDPLSMQSSYEAAKASLEQAEDAYSRMK-ELHDKGSLPEIQWVEVQSKLR 138

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              S   I  K  +   + +P +G I       +        P++K+V  S    +R  V
Sbjct: 139 QARSMEEIASKNLKDTRLYAPFSGVIAEKNV-EAGQNVAPGVPVVKLVSLSG-LKVRISV 196

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
              ++ HV  G    +  P     R     A    +   +S+          Y+V +++ 
Sbjct: 197 PETEVGHVSLGQEVEIIVPALNGKRYTGRIAEKGIVANALSRA---------YDVKIQLF 247

Query: 395 DLAFSDNNIELRNGFPAEV 413
           +        EL  G   EV
Sbjct: 248 EADK-----ELMPGMVTEV 261



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 11/91 (12%), Positives = 34/91 (37%), Gaps = 1/91 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K+  V  G ++  G  +   + +      +  K S++         K   D  +   
Sbjct: 68  GTVKRLHVGLGDRVTSGQLIAELDPLSMQSSYEAAKASLEQAEDAYSRMKELHDKGSLPE 127

Query: 125 -DVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
              +E   + R+ + ++ +   +   ++++ 
Sbjct: 128 IQWVEVQSKLRQARSMEEIASKNLKDTRLYA 158


>gi|52840895|ref|YP_094694.1| HlyD family secretion protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628006|gb|AAU26747.1| HlyD family secretion protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 285

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 71/221 (32%), Gaps = 18/221 (8%)

Query: 206 FEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEI 262
            +K  V ++ D +     +  +  +L + I  QKN  R     E   +          + 
Sbjct: 72  VKKGQVLARLDKDTFIANLETAKAQLEQAIANQKNASRTYKRREQLVDNGAVSKALFDDA 131

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
               + +    A   + L   + +     I +P  GTI+  +          ++P+  + 
Sbjct: 132 VAMKDSSSAEVAVAKANLEKAQISLNDTEIHAPTHGTILT-RIQEPGAIVNIAEPVYTLA 190

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS-----QQ 377
                 ++R  +    +  +  G  A V   +     EK +K  I  I P         +
Sbjct: 191 -IDNPVWVRTYIDEPFLGKIYPGQEALV---YTDSNPEKPYKGHIGFISPQAEFTPKIVE 246

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
              L+T   Y + + +           LR G P  V    K
Sbjct: 247 TTQLRTDLVYRIRVVVDQPDNG-----LRQGMPVTVKIHLK 282



 Score = 43.5 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 35/110 (31%), Gaps = 4/110 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I    V+ G+ + +G  L   +       ++  K  ++         +        +
Sbjct: 58  SGRILSMDVDEGAHVKKGQVLARLDKDTFIANLETAKAQLE----QAIANQKNASRTYKR 113

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            + L       +    D +    S+ ++V     +     + +  T + +
Sbjct: 114 REQLVDNGAVSKALFDDAVAMKDSSSAEVAVAKANLEKAQISLNDTEIHA 163


>gi|268679258|ref|YP_003303689.1| biotin/lipoyl attachment domain-containing protein
           [Sulfurospirillum deleyianum DSM 6946]
 gi|268617289|gb|ACZ11654.1| biotin/lipoyl attachment domain-containing protein
           [Sulfurospirillum deleyianum DSM 6946]
          Length = 268

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 52/143 (36%), Gaps = 10/143 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG ++  DN   I S + G +K+  V+ G  + +G  L   +  E    ++         
Sbjct: 26  SGSVI-SDNEKSISSRYMGYVKEVFVKEGDVVKKGQVLYRIDSKEIDSALE--------- 75

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  +  E++ L ++  +             Q L           +      +++   L +
Sbjct: 76  QSRLAIEQAQLSYVMYEAQYTNAKLNLERHQRLYAKDMVSKFDVENLELSCNNLKTMLHI 135

Query: 167 KLTRMRSIYLNRLDLENKSSLLR 189
              ++ +    RL++EN+   L 
Sbjct: 136 AQKQIATAKQKRLEVENQYHYLD 158


>gi|317477265|ref|ZP_07936502.1| efflux transporter [Bacteroides eggerthii 1_2_48FAA]
 gi|316906577|gb|EFV28294.1| efflux transporter [Bacteroides eggerthii 1_2_48FAA]
          Length = 355

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 39  PIEISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
            I+  +S+SG+  +     V   +        SG I+K  V++G+++  G  L   +  +
Sbjct: 33  KIDTVISASGQSYLQYPGKVKAAQDISLAFRVSGTIQKIYVKDGARVQAGQLLAELDPTD 92

Query: 92  TTDLIDLKKVSIKNLRCHIDT 112
               +D  +   K ++   + 
Sbjct: 93  YQVQLDATEAEYKQIKAEAER 113


>gi|260752724|ref|YP_003225617.1| secretion protein HlyD [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552087|gb|ACV75033.1| secretion protein HlyD family protein [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 348

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 66/239 (27%), Gaps = 32/239 (13%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L  +   +Q +  Q +  V ++  E            + +            + ++  +
Sbjct: 105 ELRAQRDAAQANFEQAQESVRRAEAEQAAAHASTGLAAQQLMHTKQMVAQSLVSDMEWQN 164

Query: 264 RDLEQNQRTFADEMSK----------------LTILEKTREQKTILSPIAGTIVYNQSFS 307
                  R  ++E S+                +  L+    + TI +P +G I   +   
Sbjct: 165 SQTAYTTRKLSEEASQHNVAAAKEAVKAASAQIARLDANLAEMTIRAPTSGQI-EYRIAE 223

Query: 308 SSNYAQQSQPLMKIV-PHSKLTYI--RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +   Q   L  ++ P      +   + V       +  G  A ++     D       
Sbjct: 224 KGSVLGQGGRLASLLDPSDIYLTVFFESAVA----GKLHVGDEARIKLDAMNDR---LVP 276

Query: 365 AIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           A I  + P         +    + +  Y V L+I           L+ G         +
Sbjct: 277 AQISFVSPEAQFTPKFVETKTEREKLVYRVKLRIMPDTVHRLGGVLKAGMTGIGYVRTE 335



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 82/306 (26%), Gaps = 20/306 (6%)

Query: 21  TLLSIIGIIGLITWSIL-------LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
            L+   G  G   W            IE    S+G +  E    ++ + ++G I      
Sbjct: 33  ILVICAGFGGFRLWHYFEHKNDLPPHIEG---SNGRL--EMTRFDVAAKYAGRITDLSFH 87

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L   +D E     D  + + +  +  +   ++     +    +  +    
Sbjct: 88  EGDVVQTGQILAHQDDSELRAQRDAAQANFEQAQESVRRAEAEQAAAHASTGLAAQQLMH 147

Query: 134 REEQLLDFLGKYHSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            ++ +   L       +    +     S   S         ++      +    + L  +
Sbjct: 148 TKQMVAQSLVSDMEWQNSQTAYTTRKLSEEASQHNVAAAKEAVKAASAQIARLDANLAEM 207

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                    +   + EK +V    L Q  R+               ++ +     + DEA
Sbjct: 208 TIRAPTSGQIEYRIAEKGSV----LGQGGRLASLLDPSDIYLTVFFESAVAGKLHVGDEA 263

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            ++       +           A    K    +  RE+      +   I+ +        
Sbjct: 264 RIKLDAMNDRLVPAQISFVSPEAQFTPKFVETKTEREKLVYR--VKLRIMPDTVHRLGGV 321

Query: 312 AQQSQP 317
            +    
Sbjct: 322 LKAGMT 327


>gi|167770187|ref|ZP_02442240.1| hypothetical protein ANACOL_01530 [Anaerotruncus colihominis DSM
           17241]
 gi|167667509|gb|EDS11639.1| hypothetical protein ANACOL_01530 [Anaerotruncus colihominis DSM
           17241]
          Length = 502

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 63/377 (16%), Positives = 124/377 (32%), Gaps = 45/377 (11%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G I  ++ V  I     G +     E G  + +G  L   +D +          ++    
Sbjct: 45  GTIEPDEQVSVI-PKVGGTVLHTYAEVGQTVKKGDLLFEIDDSDA---------ALAYRM 94

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                E+  +          E    + + Q+       ++T  K+ +Y       SL M 
Sbjct: 95  AQAGYEQRMISADTTLGSGYESRVLAAKAQVDAAQQNLNNTRLKLKDYN-DGYDDSLIMA 153

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQ-KDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             R       R + E K         ++   D    + L++    +++D +     V   
Sbjct: 154 EKR-------RDEAEQKMKAAEEAYKNYTGDDQKEKEELYKAWTQAESDYSMYRSAVNDL 206

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF-ADEMSKLTILEK 285
                    + +N  ++    Y++A     NY   +   LE  QR   AD  S    LE+
Sbjct: 207 EDSEDSEARDLRNAYKNAQTNYEQA---LNNYNLLLGGSLEDTQRAMEADLKSAELSLEQ 263

Query: 286 ---TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
              T ++  I +PI G I      S  + A  S  +   + +         V    ++ +
Sbjct: 264 SASTLDKYKIYAPIDGVIEQKNI-SEQSLASPSS-VAYTLSNKSTIMTTFYVPSGAVEQM 321

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             G + T+      +  +K +   I +I  ++  Q         ++V  +I       ++
Sbjct: 322 AVGDSVTI------ENGQKSYTGSIAEIGTMVDPQTGL------FKVKAQINS-----DD 364

Query: 403 IELRNGFPAEVLFTAKN 419
             L+ G   +V  T   
Sbjct: 365 GMLQTGLSVKVTATTGK 381


>gi|58581999|ref|YP_201015.1| cation efflux system protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58426593|gb|AAW75630.1| cation efflux system protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 420

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 72/197 (36%), Gaps = 19/197 (9%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L        K+   L++   E       +      A        ++     + + R  +
Sbjct: 165 ELATAYSDAGKARATLQQARLELARQ--KVLAADSIAAAHDLQAAQQAFDSAQNDARAAS 222

Query: 275 DEMSKLTILEK--TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           D +++L +  +  +  +  + +PIAG +V   +     +   S PLM  V      ++ A
Sbjct: 223 DRLAQLGVAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMT-VADISRVWLTA 281

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  ++I  V +G   T     Y     + F   ++ +D ++      L      +V + 
Sbjct: 282 SVPEREIGQVFEGQQVTASLDAYP---GQHFTGQVQHLDDLLDPTTRTL------KVRV- 331

Query: 393 ITDLAFSDNNIELRNGF 409
               A ++++  L+ G 
Sbjct: 332 ----ALNNHDGLLKPGM 344



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 35/115 (30%), Gaps = 4/115 (3%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE-TTDLIDLKKVSIKNLRC 108
           +L E  V  +  P +G +       G  +  G  L   +  E  T   D  K      + 
Sbjct: 125 VLPERLVRVV-PPLAGRVVALPKTLGDTVRAGDVLCVLDSAELATAYSDAGKARATLQQA 183

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            ++  +     L           ++ ++          +   ++   G+++   S
Sbjct: 184 RLELARQ--KVLAADSIAAAHDLQAAQQAFDSAQNDARAASDRLAQLGVAAQATS 236


>gi|27366626|ref|NP_762153.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio vulnificus CMCP6]
 gi|27358192|gb|AAO07143.1| Membrane fusion component of tripartite multidrug resistance system
           [Vibrio vulnificus CMCP6]
          Length = 341

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 84/259 (32%), Gaps = 24/259 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +  +      A E+++ Q ++         ++ +   +     + ++ + +   
Sbjct: 50  RAKILSVAPQVQGQVVAVEAKDFQAVNKGDLLLKIDARPYLLAVKQAKAAYQLAVQQHDV 109

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 +        R+ L+  Q +   + +L  +   S  DL+  +  +  +   L + 
Sbjct: 110 ADKQVTEAVAGLDAARSNLTEAQLEYKRIDSLVTRKLTSAQDLDTAKNKLANAQASLEQA 169

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +  + +  E   EA +      +                   L   E       I 
Sbjct: 170 RASVEKAIANRGEEGAEAAVVQQAAAQ-------------------LAQAELNLSYTDIT 210

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ G      +    +     Q L  ++      ++RA      + H+K G  A V   
Sbjct: 211 SPVDGIAGEINTH-VGSVVAVGQTLFPVI-IKDSYWVRAAFKETDLTHIKPGMEAEVVID 268

Query: 354 HYADIREKKFKAIIEKIDP 372
            Y D     +KA +E++ P
Sbjct: 269 MYPDR---VWKATVEELSP 284


>gi|312961743|ref|ZP_07776241.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
 gi|311284002|gb|EFQ62585.1| type I secretion membrane fusion protein [Pseudomonas fluorescens
           WH6]
          Length = 399

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 84/217 (38%), Gaps = 22/217 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           G+ S   +L   + ++R +Y N   ++ + +  +A + + Q +    K L +  A+SQ +
Sbjct: 101 GLQSAQANLARTVRQVRGLYSNVDGMKAQVNAQKADVQTAQDNYNRRKTLAQGGAISQEE 160

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L+             R+++   KN L ++ +    +N    + +     D++        
Sbjct: 161 LSHA-----------RDSLTAAKNALTNLEQQLKTSNALVDDTVISSHPDVQAAAAQL-- 207

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                     T  + T+++P+ G +   ++       Q    LM ++P +   +I A   
Sbjct: 208 -----RQAYLTNARSTLIAPVTGYVAK-RTVQLGQRVQPGTALMAVIPLN-QLWIDANFK 260

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             Q++ ++ G    +    Y      KF   ++ +  
Sbjct: 261 ETQLRDMRIGQPVDIESDIYGSDV--KFSGTVDSLGA 295



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 13/189 (6%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFS 64
             N  R     L  + L+ I+G +G+  W         S     +     NVVEI    +
Sbjct: 14  TDNNPRKRKVMLIGLALVVILGAVGVWGWYEFYGRFNESTD---DAYVNGNVVEITPLVT 70

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +     ++G  + +G  L+ F+  +         V +++ + ++      +  L +  
Sbjct: 71  GTVVSIGADDGDLVHEGQVLVNFDPNDAA-------VGLQSAQANLARTVRQVRGLYSNV 123

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D ++    +++  +      Y+    K    G +     L      + +      +LE +
Sbjct: 124 DGMKAQVNAQKADVQTAQDNYN--RRKTLAQGGAISQEELSHARDSLTAAKNALTNLEQQ 181

Query: 185 SSLLRALLS 193
                AL+ 
Sbjct: 182 LKTSNALVD 190


>gi|330812493|ref|YP_004356955.1| ABC transporter periplasmic protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327380601|gb|AEA71951.1| putative ABC transporter, periplasmic component [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 321

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/309 (11%), Positives = 92/309 (29%), Gaps = 31/309 (10%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           KS  D L     +     E+ E Q+     K     ++V      +V +   +     R+
Sbjct: 29  KSRHDRLPEGLSMGNGRLEATEVQIA---SKTPGRLAEVHVDEGDNVIKGQVLARMDTRT 85

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +   R   E +    R  L++ +               +   L Q E+++    L+  + 
Sbjct: 86  LEAQRNQAEAEVVRARQNLAATE---------------ANVQLRQSEQLLAHQELKRTQE 130

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           + ++      + +            +      +          ++++  L    +  T+ 
Sbjct: 131 LFKRGYASGQVIDQQQARVDTANAAVNAARAQVSAANAAIGATLAQVAQLTSEIDDSTLR 190

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSK--LTYIRAKVTPKQIQHVKKGYTATV 350
           +P+ G I   +             ++ ++ P+ +    Y+ A V       +  G  A +
Sbjct: 191 APLDGVIQ-LRLAEPGEVLGAGGRVLLMIDPNDQYMNLYLPASVA----GKLAVGNEARL 245

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
                 +       + +        +  +  + + +  + V +++T           + G
Sbjct: 246 LLDALPERPLPAKVSFVAAKSQFTPKEVETRDERQKLVFRVKVRLTQPGEVPQA---KPG 302

Query: 409 FPAEVLFTA 417
            P       
Sbjct: 303 MPGAGYVRT 311



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 61/202 (30%), Gaps = 8/202 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITW-SILLPIEIS-VSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
                  +  ++   G   W S    +       +G +   +  V+I S   G + +  V
Sbjct: 9   RFFAFALMTVLLAAGGFGYWKSRHDRLPEGLSMGNGRLEATE--VQIASKTPGRLAEVHV 66

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G  +++G  L   +        +  +  +   R ++   ++ +  L     +L     
Sbjct: 67  DEGDNVIKGQVLARMDTRTLEAQRNQAEAEVVRARQNLAATEANVQ-LRQSEQLLAHQEL 125

Query: 133 SREEQLLDF---LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            R ++L       G+         +   ++V  +         +I      +   +S + 
Sbjct: 126 KRTQELFKRGYASGQVIDQQQARVDTANAAVNAARAQVSAANAAIGATLAQVAQLTSEID 185

Query: 190 ALLSSHQKDLTMMKNLFEKNAV 211
                   D  +   L E   V
Sbjct: 186 DSTLRAPLDGVIQLRLAEPGEV 207


>gi|319900872|ref|YP_004160600.1| efflux transporter, RND family, MFP subunit [Bacteroides helcogenes
           P 36-108]
 gi|319415903|gb|ADV43014.1| efflux transporter, RND family, MFP subunit [Bacteroides helcogenes
           P 36-108]
          Length = 415

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 70/202 (34%), Gaps = 25/202 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+    L L+ +   L   L   ++     + L E
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQESLRLKQERIGLNKELVRKRRRYEQYRRLME 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  ++  D  Q E     +           +  L  ++E   + N+   + +  +  ++ 
Sbjct: 168 EQLIAGEDFLQAEEEYQVA-----------REQLAVVDERIRQDNVFRESQISSLDENIR 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +++ A    +L       E   I +P+ G +    +          + + +I+     
Sbjct: 217 NMKKSLALVRERL-------ENLKIKAPLDGQVGNLNA-QVGQSISAGEHIGQIITPD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTAT 349
             ++A++    ++ V  G  A 
Sbjct: 267 LKVQAQIDEHYVERVLPGLPAD 288



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 75/213 (35%), Gaps = 17/213 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G++L  + ++ + +   G +++   E G+ +  G  +L   +       +++   +
Sbjct: 62  IRVIGQVLP-NRIIYMDAVEGGRVEERLKEEGAMVKAGDVILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++  ++N R  ++ E   L       +  E   + R  +    L +      + F   
Sbjct: 121 AYQENELRNTRISMEQESLRLKQERIGLN-KELVRKRRRYEQYRRLMEEQLIAGEDFLQA 179

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                 + +        I  + +  E++ S L   + + +K L +++   E         
Sbjct: 180 EEEYQVAREQLAVVDERIRQDNVFRESQISSLDENIRNMKKSLALVRERLEN-------- 231

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            + +  +      L   + +  +   HI ++  
Sbjct: 232 LKIKAPLDGQVGNLNAQVGQSISAGEHIGQIIT 264


>gi|260893741|ref|YP_003239838.1| efflux transporter, RND family, MFP subunit [Ammonifex degensii
           KC4]
 gi|260865882|gb|ACX52988.1| efflux transporter, RND family, MFP subunit [Ammonifex degensii
           KC4]
          Length = 407

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 75/270 (27%), Gaps = 53/270 (19%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
             +   L      +          E   S+ RA L     +    K L    A+  +   
Sbjct: 114 KELKDRLNQAAAAVEQARAALEQAEGSLSVSRANLEKATINYKRGKELLAAGAIPPSVFE 173

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            Q  + Y    E  E I                           +   +E  +   A   
Sbjct: 174 NQYELPYLQAKESAERI---------------------------VPAQVEAARAQLAQAE 206

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TYIRAKVT 335
           + L + +   E   I +P  G +    S+   + A   +P++ +          +R KV 
Sbjct: 207 AGLALAKSAYEDAIIRAPFDGVVTAVHSY-PGDLAVPGKPILTL---DDPGKMVVRVKVA 262

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              +  +K G  AT+R            +    ++  I   +D   ++     V L ++ 
Sbjct: 263 EVDLPLLKVGQKATLR--------YPSGQETASQVSRIYPAEDPLTRST---IVELPVSS 311

Query: 396 LAFSDNNIELRNGFPAEVLFTAK--NTTLA 423
                     + G   EV F        L 
Sbjct: 312 PGV-------KPGMSVEVSFVVGRNERALL 334



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/127 (11%), Positives = 47/127 (37%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I+   V+ G ++ +G  L+  +D E  D ++    +++  R  ++  + +L       + 
Sbjct: 91  IRTVTVKEGDRVTRGQVLVVLDDKELKDRLNQAAAAVEQARAALEQAEGSLSVSRANLEK 150

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
               ++  +E L           ++     + +   + ++   ++ +        E   +
Sbjct: 151 ATINYKRGKELLAAGAIPPSVFENQYELPYLQAKESAERIVPAQVEAARAQLAQAEAGLA 210

Query: 187 LLRALLS 193
           L ++   
Sbjct: 211 LAKSAYE 217


>gi|296106430|ref|YP_003618130.1| Membrane-fusion protein [Legionella pneumophila 2300/99 Alcoy]
 gi|295648331|gb|ADG24178.1| Membrane-fusion protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 338

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 72/221 (32%), Gaps = 18/221 (8%)

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L + NA   +++ + + +       L+ N+ E K     + ++  E N +     
Sbjct: 61  QNTARLVKLNADEGSEVVKGQILASLEDEHLQHNLKELKEHE-KLAKIRYERNAQLVKKG 119

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                + ++    +    + +  +E       +++P  G I+  +          +QP+ 
Sbjct: 120 VISKDEYDRTLSEWQAASAAVRRIEAQISYLQLIAPADGRIIK-RDGEVGQLIPANQPVF 178

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +        + A+V  + I  V+ G    +R   + +     F   ++ I P       
Sbjct: 179 WLS-CCAPLRVSAEVDEEDIVLVRVGQKVLIRSDAFPNQI---FYGRVKSITPKGDPIAR 234

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +      Y V +  ++      N  L  G  AE        
Sbjct: 235 S------YRVRISFSE------NNPLLIGMTAETNIIVHEK 263


>gi|294139936|ref|YP_003555914.1| HlyD family secretion protein [Shewanella violacea DSS12]
 gi|293326405|dbj|BAJ01136.1| HlyD family secretion protein [Shewanella violacea DSS12]
          Length = 355

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 74/218 (33%), Gaps = 21/218 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            QL+    +  S   + F   ++    +LK  +    S+Y      +   +   A   + 
Sbjct: 64  NQLVKSGDQLFSIDDRKFKLAVTMAELNLKQAIEGESSLYAQAAAAKANITTSTAAADNA 123

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            +D   +  L    AVS++ L+    +  +S+ +L     + K +   +     +++L  
Sbjct: 124 LRDYQRISKLSTTGAVSESQLDSTRTLRDESSAKLVAAKAQLKAIETQLGGGEGDSSL-- 181

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                 + L   +       I +P  G +   Q     ++A  +
Sbjct: 182 -----------------VHSAETSLAQAKLDFSHTLIKAPSDGVVTNLQLH-KGSFASTN 223

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           QPL+  +P     +I A    K    +K G  A V F 
Sbjct: 224 QPLLTFIPTDS-LWITADFREKATSMLKPGMEAEVTFD 260



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 64/184 (34%), Gaps = 15/184 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVV--EIK-SPF-S 64
           ++       + MT+L I+ ++  +    L+  +        +  E  V    ++ +P  S
Sbjct: 1   MELAEKKFRRWMTVLIIMFVVTFL---YLVMADRYAP----MTTESRVQGFVVQLAPEVS 53

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V N   +  G  L + +D +    + + ++   NL+  I+ E S         
Sbjct: 54  GYITQVDVINNQLVKSGDQLFSIDDRKFKLAVTMAEL---NLKQAIEGESSLYAQAAAAK 110

Query: 125 DVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +  +  + +  L D+      ST   V    + S          ++ +       +E 
Sbjct: 111 ANITTSTAAADNALRDYQRISKLSTTGAVSESQLDSTRTLRDESSAKLVAAKAQLKAIET 170

Query: 184 KSSL 187
           +   
Sbjct: 171 QLGG 174


>gi|260170583|ref|ZP_05756995.1| periplasmic component of efflux system [Bacteroides sp. D2]
 gi|315918931|ref|ZP_07915171.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313692806|gb|EFS29641.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 406

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 71/215 (33%), Gaps = 17/215 (7%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDL 266
             +++ D    +  +            E +   ++        E +L      ++   + 
Sbjct: 86  QLIAEMDRATLQSELASQQATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ + ++    + L   E+     TI SPI G ++  +   +            L  I  
Sbjct: 146 QKAKSSYDSSKASLAKAERNLAYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNN 380
                 + A V    I  + +G  A+     Y +     F+ ++ +I   D   +   + 
Sbjct: 205 DLTQMQVVADVDEADIGGIVEGQRASFTVDAYPND---VFEGVVTQIRLGDASSTSSTST 261

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             T   YEV++        + +++L+    A V  
Sbjct: 262 TTTVVTYEVVISAP-----NPDLKLKPRLTANVTI 291



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 52/135 (38%), Gaps = 4/135 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII K  V+  S + +G  +   +       +  +
Sbjct: 45  ISNSVTATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSVVTKGQLIAEMDRATLQSELASQ 103

Query: 100 KVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + +    +   + +K   +    L+ K  + +  FE            Y S+ + +    
Sbjct: 104 QATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNYQKAKSSYDSSKASLAKAE 163

Query: 157 ISSVYRSLKMKLTRM 171
            +  Y ++   +  +
Sbjct: 164 RNLAYATITSPIDGV 178


>gi|228476623|ref|ZP_04061305.1| peptide ABC transporter [Streptococcus salivarius SK126]
 gi|228251818|gb|EEK10883.1| peptide ABC transporter [Streptococcus salivarius SK126]
          Length = 355

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 91/282 (32%), Gaps = 14/282 (4%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           T +KV   G + +  +   ++++  ++      L+ + + L+ L SS ++   + +   +
Sbjct: 76  TSNKVVKKGETLIQYTETTEISQKDNLQQKLDLLKRQETQLKILKSSLEQGSNLFQE-DD 134

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                Q+  +     + +    ++ N          I+        +   +L+E+ + L 
Sbjct: 135 DEFGYQSTFSTYVSQLDELETSVQNNDEGFVTDDTSISSKKLALKNQ---FLQEVVQQLS 191

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---H 324
             Q    D   K+           I +P  G +   Q    S        L ++ P    
Sbjct: 192 TLQSQIIDLEGKVNQAGFQLSSTQIQAPEDGILHIVQPAKQSTVVATGTELAQLYPNILD 251

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           ++   I   V+ + + ++KKG    +      +      K  IE ID   ++ +      
Sbjct: 252 TREVLISYYVSSEYVSNLKKGQVVRLFLDKVGN-HGVTIKGSIESIDGFATETEKGN--- 307

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
                 +       +     ++ G    V       T    +
Sbjct: 308 ---VFRITAKAKLTTKEAQNIKYGLQGHVTSVIAKKTYFDYV 346



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 85/217 (39%), Gaps = 19/217 (8%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLS---IIGIIGLITWSILLPIEISVSSSGEILNEDNVV 57
           M+  ++K+ +  H       TLL    ++ ++ L+++S     EI V + G +     + 
Sbjct: 1   MNPNLFKSTEFYHRRYHNFTTLLVFPLVLFVVFLVSFSFWAKKEIVVQAIGTVEATRIIA 60

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEK 114
            I+S     I    + +   + +G  L+ + +       D  +  +  L+     +   K
Sbjct: 61  LIQSTSDNPIMANYLTSNKVVKKGETLIQYTETTEISQKDNLQQKLDLLKRQETQLKILK 120

Query: 115 SALDFLNNKYDVLEKAF-------------ESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           S+L+  +N +   +  F             +  E  + +    + +  + + +  ++   
Sbjct: 121 SSLEQGSNLFQEDDDEFGYQSTFSTYVSQLDELETSVQNNDEGFVTDDTSISSKKLALKN 180

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           + L+  + ++ ++    +DLE K +     LSS Q  
Sbjct: 181 QFLQEVVQQLSTLQSQIIDLEGKVNQAGFQLSSTQIQ 217


>gi|116621482|ref|YP_823638.1| RND family efflux transporter MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116224644|gb|ABJ83353.1| efflux transporter, RND family, MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 425

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 56/377 (14%), Positives = 101/377 (26%), Gaps = 83/377 (22%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +G  + ++   +I    +G +    V  G  + QG  +   E  +        ++ +   
Sbjct: 55  TGTFIADETS-DIAPLVAGRVIATPVNVGDFVKQGQVICELEHRDA-------QLRLDQA 106

Query: 107 RCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           R  +D   + +    ++  +     F+             + +         +   R   
Sbjct: 107 RAALDQATAGVRQSQSRIGLAANGKFDPNNVPEAAAARAAYESAQAQARLAAADAKR--- 163

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                                                +NL     VS+            
Sbjct: 164 ------------------------------------YENLVASGDVSR------------ 175

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           S  E      E      +  +   EA L  A         +E +Q +     S+L   EK
Sbjct: 176 SAFEKAHTAQETAEAQANAAKQQYEAALNTARMS---YGAVENSQASLEGARSQLAQAEK 232

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                TI +P  G I      ++  Y   S  +  IV       +  +   +Q    K G
Sbjct: 233 GLSDTTIRAPFDGYITARPV-AAGEYVALSNKIATIV-RIGTMKLELQTPEQQAGRAKLG 290

Query: 346 YTATVRFPHYADIRE-KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
                R   Y D     +  AI + +DP                  + I +  F +   E
Sbjct: 291 MAVVARVAAYPDRDFNGRVSAINQSVDPNS---------------RVFILEAKFDNPKGE 335

Query: 405 LRNGF--PAEVLFTAKN 419
           LR G    A V+     
Sbjct: 336 LRPGMFSTARVILPGGE 352


>gi|255524374|ref|ZP_05391331.1| EmrA-related transporter protein [Clostridium carboxidivorans P7]
 gi|296187499|ref|ZP_06855894.1| drug transporter family protein [Clostridium carboxidivorans P7]
 gi|255511931|gb|EET88214.1| EmrA-related transporter protein [Clostridium carboxidivorans P7]
 gi|296048021|gb|EFG87460.1| drug transporter family protein [Clostridium carboxidivorans P7]
          Length = 217

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 63/178 (35%), Gaps = 18/178 (10%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            +   +   I     E N++   Y+++       +    AD  +         +   + +
Sbjct: 44  SDLVKIAPQITGKLAEINIKDGQYVEKDQIVGRIDMGNLADIAT---------DSSVVRA 94

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           PI+G I+  Q  ++       QPL  ++      YI A +   +++ VK G +  +    
Sbjct: 95  PISGIILKKQG-TAGEVVTAGQPLATMI-DPSALYINANIDETKLKKVKLGQSVDITVDE 152

Query: 355 YADIREKKFKAIIEKIDPIISQQD---NNLQTQEYYEVILKIT-DLAFSDNNIELRNG 408
           Y  ++       +  +    +          +  + +V+ KI   ++   N  +L  G
Sbjct: 153 YDGLK---LSGKVISVGDYANSDLSVIPTSTSGTFTKVVQKIPVKISLPKNKYKLLPG 207


>gi|115376309|ref|ZP_01463548.1| efflux transporter, RND family, MFP subunit [Stigmatella aurantiaca
           DW4/3-1]
 gi|115366659|gb|EAU65655.1| efflux transporter, RND family, MFP subunit [Stigmatella aurantiaca
           DW4/3-1]
          Length = 399

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 62/200 (31%), Gaps = 19/200 (9%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +  S+   +    E    L  +  +  +     A    +   +LE  Q       + +T
Sbjct: 123 QLDNSSEAAQLKGAEADAELARLTHVRVQT---LATQGSKPQAELESAQARVVQAEAAVT 179

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
            L     +K I +P  G I   +            P+  +       ++   +  + +  
Sbjct: 180 NLRALIAKKVIRAPFDGRI-GIRQVELGQVLAPGGPIASLH-TMDPIHVEFLLPQQALAE 237

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           VK G    V    +       ++  +  I+P +     N        V ++ T     + 
Sbjct: 238 VKPGQKVRVHVDVFPKDT---WEGELTTINPEVEISSRN--------VRMRAT---VPNA 283

Query: 402 NIELRNGFPAEVLFTAKNTT 421
           +  L  G  A +   ++N +
Sbjct: 284 DGRLIPGMFANIDVLSENKS 303



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 43/127 (33%), Gaps = 1/127 (0%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            + G ++    V  + +  SGI++    ENG+++ +G  L+  ++      +   +   +
Sbjct: 83  RAVGTVIAVRGV-TLGAEVSGIVRDIGFENGARVKKGQVLVQLDNSSEAAQLKGAEADAE 141

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             R      ++     +     LE A     +              KV            
Sbjct: 142 LARLTHVRVQTLATQGSKPQAELESAQARVVQAEAAVTNLRALIAKKVIRAPFDGRIGIR 201

Query: 165 KMKLTRM 171
           +++L ++
Sbjct: 202 QVELGQV 208


>gi|37526624|ref|NP_929968.1| hypothetical protein plu2734 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786056|emb|CAE15108.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 385

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 75/222 (33%), Gaps = 31/222 (13%)

Query: 211 VSQNDLNQQERIVYKSTLELREN-IHEQKNMLRHINELYDEANLEFANY-LKEISRDLEQ 268
            S+  L +   ++ +     +   I E++    ++     +  L+ A + +K+    +E 
Sbjct: 104 ASRARLEKLRAMLQEEQYAYQLLVITEKRQRELNLRSATSQQLLDEAAFGVKKSQARIES 163

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP---------LM 319
            +         L   E +     I SPIAG +               Q          LM
Sbjct: 164 LKADIRQNEHILHSEEVSLSYSQIYSPIAGVVTAIH-------VDPGQTLNVNQQTPVLM 216

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +I    K   + AKV+   I  +  G  A+ +           +   ++KI      + +
Sbjct: 217 QIA-DLKNMTVYAKVSEADINQIVTGQKASFKIYSTNQHI---WHGNVKKIMY----KPD 268

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +    YY V+  +      ++N  L+    A+V      +T
Sbjct: 269 LINNAVYYTVLFDVP-----NDNFLLKPSMSADVTIVTHEST 305



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 53/139 (38%), Gaps = 3/139 (2%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +V+++G +     V  + S  SG + K  VE G  +  G  + + +D      ++  +  
Sbjct: 50  TVNAAGIVQPTSQV-NVGSQISGQLTKLYVEVGDIVETGKLVASIDDTFYRTKVEASRAR 108

Query: 103 IKNLRCHIDTEKSALDFL--NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           ++ LR  +  E+ A   L    K         +  +QLLD                 + +
Sbjct: 109 LEKLRAMLQEEQYAYQLLVITEKRQRELNLRSATSQQLLDEAAFGVKKSQARIESLKADI 168

Query: 161 YRSLKMKLTRMRSIYLNRL 179
            ++  +  +   S+  +++
Sbjct: 169 RQNEHILHSEEVSLSYSQI 187


>gi|226942230|ref|YP_002797303.1| type I secretion protein, HlyD family [Azotobacter vinelandii DJ]
 gi|226717157|gb|ACO76328.1| Type I secretion protein, HlyD family [Azotobacter vinelandii DJ]
          Length = 339

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/372 (14%), Positives = 109/372 (29%), Gaps = 86/372 (23%)

Query: 56  VVEIKSPFSG-IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
                +      I + +VE G ++  G  L   +       ++     +  L   +   +
Sbjct: 44  RQVALAFEGSDRIAEMRVEEGDRVHAGQVLAMLDTRTLRLQLEQAVAQVGVLEQSLLALR 103

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +                 SR E++     +  +  ++V    +   +R L     R    
Sbjct: 104 NG----------------SRPEEIAQADAQVVAAAAEVERSRLQ--FRRLHDASMRTGGH 145

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            ++R DL+N  + LR   +         +            +  ++  + ++  +LR   
Sbjct: 146 AVSRQDLDNARAQLRVAQAQLDAQRQAQR---------LARIGPRQEDIARAEAQLRAAQ 196

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E+  +   I+                                              + +
Sbjct: 197 AERALLQHRIDLA-------------------------------------------ELRA 213

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P A  +V  +     + A   QP   +   S   ++RA     ++  ++ G  ATV    
Sbjct: 214 PQAA-VVRARLLEPGDMASPQQPAYTLA-LSDPKWVRAYANEVELGRIRPGMAATVVTDS 271

Query: 355 YADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
             D         +  I  +      S Q  +L+T   YEV + + D         LR G 
Sbjct: 272 APDA---PIDGRVGFISSVAEFTPKSVQTEDLRTSLVYEVRILVDDP-----RDRLRLGM 323

Query: 410 PAEVLFTAKNTT 421
           PA +   A   T
Sbjct: 324 PATIRLVADAET 335


>gi|302879269|ref|YP_003847833.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
 gi|302582058|gb|ADL56069.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
          Length = 384

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 80/243 (32%), Gaps = 19/243 (7%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +    + LL     DL     L  +  V+   L++Q         +L E   E+   L 
Sbjct: 85  ERVKAGQILLKLWNNDLEAQSGLAREQLVTSKMLSRQ----SCLQADLAEKEAERSRQLH 140

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
               + +E   +  +  +      E          S++T      ++  + +P  G +  
Sbjct: 141 TKGFISNEGLDQRVSAARVARAGCEAATSQIEQSQSRITAANAALDRMVLRAPFDGIVAD 200

Query: 303 NQ-----SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
                    + S     + P + ++   +  ++ A +       +K G  A +       
Sbjct: 201 ISGELGEYATPSPPGIPTPPAIDLI-DDRCLFVSAPIDEVDAARIKTGQLARITLDA--- 256

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           I+ K F   +++I P + + +   +T     V +++  +        L  G+ A+V    
Sbjct: 257 IKGKSFAGRVKRIAPYVLELEKQART-----VEVEVDFIE-PPTTENLLTGYSADVEIVH 310

Query: 418 KNT 420
              
Sbjct: 311 SAR 313



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 42/147 (28%), Gaps = 7/147 (4%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           +  ++ +P  G I    V+ G ++  G  LL   + +      L        R  + T K
Sbjct: 64  HRAKLSAPSGGQIAHLLVKKGERVKAGQILLKLWNNDLEAQSGLA-------REQLVTSK 116

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
                   + D+ EK  E   +              +V    ++                
Sbjct: 117 MLSRQSCLQADLAEKEAERSRQLHTKGFISNEGLDQRVSAARVARAGCEAATSQIEQSQS 176

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTM 201
            +   +      +LRA       D++ 
Sbjct: 177 RITAANAALDRMVLRAPFDGIVADISG 203


>gi|206969581|ref|ZP_03230535.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|218230955|ref|YP_002369364.1| hypothetical protein BCB4264_A4677 [Bacillus cereus B4264]
 gi|296505042|ref|YP_003666742.1| multidrug resistance protein A [Bacillus thuringiensis BMB171]
 gi|206735269|gb|EDZ52437.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|218158912|gb|ACK58904.1| conserved hypothetical protein [Bacillus cereus B4264]
 gi|296326094|gb|ADH09022.1| multidrug resistance protein A [Bacillus thuringiensis BMB171]
 gi|326942352|gb|AEA18248.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 217

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 57  KLTDWKAEVGKNYNEN-----DKLGTVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 110

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 111 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LTGKVEQVGL 166

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 167 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 216


>gi|150388034|ref|YP_001318083.1| RND family efflux transporter MFP subunit [Alkaliphilus
           metalliredigens QYMF]
 gi|149947896|gb|ABR46424.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
           metalliredigens QYMF]
          Length = 403

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 75/264 (28%), Gaps = 40/264 (15%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           I    +S+ +    +          +      +  + + + +L   K LF+  A S++ L
Sbjct: 105 IEQAEQSVNLAQRSVEQAENAVETTKISFETTKENIENAEINLQRTKELFDAGAASRSQL 164

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            Q E    +  LE                           N +++     +Q     +  
Sbjct: 165 EQAELAASRRPLE------------------------TVENQIRQAEIGYQQALNQLSQA 200

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                  +   E   + +P++G I      +    A  +QPL  I       Y +  VT 
Sbjct: 201 QIGYRQAQDALEDTVVRAPMSGVISILNVVA-GELAGGTQPLATIA-DINRVYFQVDVTE 258

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             +  +  G    V  P      E +    I+ I    +           Y V + I + 
Sbjct: 259 NIVNMLGDGQEVVVNIPA---ALEGEIIGTIDFISSTANPNTRL------YTVKVNIDNQ 309

Query: 397 AFSDNNIELRNGFPAEVLFTAKNT 420
                  ++R G    +       
Sbjct: 310 ER-----KIRTGMSGSMDLDLDGR 328



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 55/141 (39%), Gaps = 3/141 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V+ G  + + + L T +  +    I+  + S+   +  ++  ++A++     +
Sbjct: 74  GRVTSVNVKLGDFVQKDSVLFTIDQKDVLRSIEQAEQSVNLAQRSVEQAENAVETTKISF 133

Query: 125 DVLEKAFESREEQLL---DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           +  ++  E+ E  L    +      ++ S++    +++  R L+    ++R   +     
Sbjct: 134 ETTKENIENAEINLQRTKELFDAGAASRSQLEQAELAASRRPLETVENQIRQAEIGYQQA 193

Query: 182 ENKSSLLRALLSSHQKDLTMM 202
            N+ S  +      Q  L   
Sbjct: 194 LNQLSQAQIGYRQAQDALEDT 214


>gi|146280484|ref|YP_001170637.1| Type I antifreeze protein:HlyD family secretion protein
           [Pseudomonas stutzeri A1501]
 gi|145568689|gb|ABP77795.1| Type I antifreeze protein:HlyD family secretion protein
           [Pseudomonas stutzeri A1501]
          Length = 369

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 86/234 (36%), Gaps = 11/234 (4%)

Query: 3   HFMWKNLKRNHPASLKRMTL-LSIIGIIGLITWSIL---LPIEISVSSSGEILNEDNVVE 58
           H     +K     +L+R+   L  + +IGL+ WS L      +   S +G I   +  ++
Sbjct: 6   HDKGTPMKAPAQKTLRRVLFALVALVVIGLLAWSELRTDGLGDGFASGNGRIEATE--ID 63

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +   G I++  V+ G  +  G  +   +       ++  +  ++     I T ++ + 
Sbjct: 64  VATKLGGRIREISVDEGDFVQPGQVIARMDTEVLEAQLNQARAQVRQAENAILTAQALVT 123

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
              ++    E     R  +L     ++  T + V    +    + L   L  M+S     
Sbjct: 124 QRESEKATAEAVVLQRRAELTAAQKRHQRTETLVGRNAMP--RQQLDDDLAAMQSAQAAL 181

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                +     A +++ +  +   ++  E    +Q  + + +  +  S L+   
Sbjct: 182 AASRAQVLSADAGIAAARSQVIEAQSALE---AAQASVVRLQADITDSELKTDR 232


>gi|123443443|ref|YP_001007416.1| multidrug resistance protein A [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090404|emb|CAL13272.1| multidrug resistance protein A [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 390

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 91/277 (32%), Gaps = 34/277 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +   +L +  LS  Q DL     L   +A+ +
Sbjct: 98  EQAYEQAQTALANTVRQTHQLIINSKQYQANIALKKTELSKAQNDLKRRVVLGSVDAIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +   L   I +       +     E                   Q   
Sbjct: 158 EELQHARDAVDAAQASLDVAIAQYNANQALVLNTPLE------------------KQPAV 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +KL       ++  ++SPI G +   +S           PLM ++P ++  +I A 
Sbjct: 200 EQAAAKLRDAWLALQRTKVVSPITGFVSR-RSVQVGAEIANGAPLMAVIPANE-MWIDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G  AT+    Y D     F+  +  +D          P  +   N ++ 
Sbjct: 258 FKETQLANMRIGQPATIVTDFYGDDV--VFQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +   V +++     +++ + +  G    V     +T
Sbjct: 316 VQRLPVRIELDAKQLAEHPLRI--GLSTTVRVDTADT 350



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-- 109
              N V+I S   G +     EN   +  G  LLT +  +     +  + ++ N      
Sbjct: 57  VSGNQVQIMSQVPGSVVSVNFENTDLVKSGDVLLTLDPTDAEQAYEQAQTALANTVRQTH 116

Query: 110 ---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              I++++   +    K ++ +   + +   +L  +        +     + +   SL +
Sbjct: 117 QLIINSKQYQANIALKKTELSKAQNDLKRRVVLGSVDAIGREELQHARDAVDAAQASLDV 176

Query: 167 KLTR--MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            + +       +    LE + ++ +A        L + + 
Sbjct: 177 AIAQYNANQALVLNTPLEKQPAVEQAAAKLRDAWLALQRT 216


>gi|227329033|ref|ZP_03833057.1| multidrug resistance protein A [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 391

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 85/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     L   + +   + +N    +    L +  L+  Q DL+  + L   NA+ +
Sbjct: 99  QQAFERAKTGLANSVRQTHQLIINSKQYQANIELRQTELNKAQSDLSRREALGSANAIGR 158

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++      V  +   L     + +     I +   E          E+           
Sbjct: 159 EEVQHARDAVATAKAALEVARQQYQANQAMILDTPLEKQPAIQQASVEMRDAWL------ 212

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         ++  I+SPI G +   +S         +  LM +VP +   ++ A 
Sbjct: 213 ------------ALQRTKIVSPIDGYVSR-RSVQIGARISSTSALMAVVPANH-LWVDAN 258

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G  ATV    Y D     ++  +  +D          P  +   N ++ 
Sbjct: 259 FKETQLANMRIGQPATVIADIYGDDV--VYQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 316

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V ++I     +++ + +
Sbjct: 317 VQRLPVRIEIDPKQIAEHPLRI 338



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 57/187 (30%), Gaps = 10/187 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN------ 105
              N ++I +  SG +    V+N   + QG  L+  +  +     +  K  + N      
Sbjct: 58  VAGNQIQIMAQVSGSVTHVNVDNTDFVKQGQVLVELDPTDAQQAFERAKTGLANSVRQTH 117

Query: 106 -LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    ++ ++    + +  +     RE                      +     +
Sbjct: 118 QLIINSKQYQANIELRQTELNKAQSDLSRREALGSANAIGREEVQHARDAVATAKAALEV 177

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
             +  +     +    LE + ++ +A +      L + +          VS+  +    R
Sbjct: 178 ARQQYQANQAMILDTPLEKQPAIQQASVEMRDAWLALQRTKIVSPIDGYVSRRSVQIGAR 237

Query: 222 IVYKSTL 228
           I   S L
Sbjct: 238 ISSTSAL 244


>gi|254503956|ref|ZP_05116107.1| efflux transporter, RND family, MFP subunit [Labrenzia alexandrii
           DFL-11]
 gi|222440027|gb|EEE46706.1| efflux transporter, RND family, MFP subunit [Labrenzia alexandrii
           DFL-11]
          Length = 356

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 55/179 (30%), Gaps = 17/179 (9%)

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           + + +   E  L+            ++ Q       + +    +      I++P+ G ++
Sbjct: 120 QSLAKSESERALQLLERRVISQHLYDRAQSELIQVNAVIAAQTERLRDYRIVAPMDGVVL 179

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             Q  S    A+    L  I    K   + A+V  + I  V    TA VR   +     +
Sbjct: 180 R-QDGSVGEVAETGDILFWIG-QPKPLQLVAEVNEEDIPKVAARQTALVRADAFP---GQ 234

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              A + +I P       N      Y V L +        +  L  G   E+       
Sbjct: 235 DLTATVSRITPKGDPVLKN------YRVYLDL------PKDTPLHIGMTTEINIVTLEK 281


>gi|167583775|ref|ZP_02376163.1| secretion protein HlyD family protein [Burkholderia ubonensis Bu]
          Length = 357

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/354 (10%), Positives = 93/354 (26%), Gaps = 73/354 (20%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V+ G  +  G PL + + +     +D  +                        
Sbjct: 58  GRVGAMLVDEGDFVKAGQPLASMDVLVLHAQLDEAR------------------------ 93

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   ++E+Q L+                      S+  ++ + RS   ++   E  
Sbjct: 94  --------AKEQQALNTAA-------------------SVDAQVAQRRS---DKAAAEAA 123

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                + L + ++ L   + L  + A S  +L+            +R    +       I
Sbjct: 124 VVQRESELDAARRRLARSETLSREGASSMQELDDDRARARSMEATVRAARAQVDAAQAAI 183

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +                    L       A   + +  ++       + SP  G + Y +
Sbjct: 184 DATK---------------AQLVAAHSAVAAAQATVARVQADLSDSELTSPRDGRVQY-R 227

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
              +         ++ +V  S   Y+   +    +  V  G    +              
Sbjct: 228 VAEAGEVLPAGGKVLNVVDLSD-VYMTFFLPETVVGKVPLGADVRIVLDAAPQYVIPARV 286

Query: 365 AIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           + +        +  +  N + +  + V  +I       +   ++ G P      
Sbjct: 287 SFVSSTAQFTPKTVETANERQKLMFRVKARIDRDLLLRHLRLVKTGLPGVAWLK 340


>gi|146278011|ref|YP_001168170.1| polysaccharide export protein [Rhodobacter sphaeroides ATCC 17025]
 gi|145556252|gb|ABP70865.1| polysaccharide export protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 411

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 57/183 (31%), Gaps = 11/183 (6%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +   R  +  E++    L    D+      +   +   F+           +     
Sbjct: 173 REGMLARRARLMAERANESELGAVPDLDSARGRALLAEEKSFM-----------DLRRDQ 221

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V R+L     +   +      L+ K+  L   L   +K+    +NL E+  V+   L + 
Sbjct: 222 VERNLAAIDAQSELLTAEIEALQAKTVQLETQLELAEKEAANARNLSERGLVASGRLFET 281

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +R +     +  +         + I     +          EI+  L++ +    +   K
Sbjct: 282 QRTLSAIESQRLDTSTAILRARQGITTAERDRIALLDGRSSEIAAQLQEVEAQILEIDRK 341

Query: 280 LTI 282
           +  
Sbjct: 342 IDT 344


>gi|115525324|ref|YP_782235.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           BisA53]
 gi|115519271|gb|ABJ07255.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           BisA53]
          Length = 350

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 63/194 (32%), Gaps = 17/194 (8%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
             R +     + L + L    +D      L E+ A ++  L+Q    +  +    R  + 
Sbjct: 120 EERREARANLAQLDSDLDLATRDFNRKHPLAERGAATEAALDQAASTLNSTKAR-RAAMA 178

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           E+  ++   +   D A         E    L Q                   ++  I SP
Sbjct: 179 ERLALIEAGSRAEDIAAARAVVAYSEAQVALAQAL----------------LDKTIIRSP 222

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           IAGTI+  Q  +           + +V       +RA+V    I HV KG    V    +
Sbjct: 223 IAGTILRRQRNAGEAVTNIDPTPVAVVGDLTHLRVRAEVDETDIDHVDKGQRVEVTADAF 282

Query: 356 ADIREKKFKAIIEK 369
              R     A + +
Sbjct: 283 PGRRFGGTVARVAQ 296


>gi|254453588|ref|ZP_05067025.1| efflux transporter, RND family, MFP subunit, putative
           [Octadecabacter antarcticus 238]
 gi|198267994|gb|EDY92264.1| efflux transporter, RND family, MFP subunit, putative
           [Octadecabacter antarcticus 238]
          Length = 382

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 23/254 (9%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           T            E ++   R  +   +    + + L +K      D+N  E I      
Sbjct: 77  TSQAETVTQFYQAEGQALPDRDTMMRAETSGEISQVLVQKG----QDVNAGEVIARFDPT 132

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
               +       L      +D A       +    R + + + T A  ++++TI+++  E
Sbjct: 133 NNEADASSAAEELARAQREFDNAEALLERGVATGDR-VSEARATLASALAEVTIVQQDAE 191

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             TI +P AG I          Y      + ++V       +  +V  + +  +  G  A
Sbjct: 192 ALTITAPFAGRIETLDLD-EGEYVSTGTEIGRLV-DITPLTVAIQVPQQSLTRLSIGQPA 249

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           T+ F     I  ++    +  +    + +               + ++  ++ +  +  G
Sbjct: 250 TIGF-----ITGEERVGTVTFVGTSAASETRTF-----------LAEIEVANADGAIPAG 293

Query: 409 FPAEVLFTAKNTTL 422
             AEV+      T 
Sbjct: 294 ISAEVIIPTGEATA 307



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 39/120 (32%), Gaps = 1/120 (0%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G+ L + +   +++  SG I +  V+ G  +  G  +  F+              +  
Sbjct: 89  AEGQALPDRDT-MMRAETSGEISQVLVQKGQDVNAGEVIARFDPTNNEADASSAAEELAR 147

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +   D  ++ L+      D + +A  +    L +         +       +    +L 
Sbjct: 148 AQREFDNAEALLERGVATGDRVSEARATLASALAEVTIVQQDAEALTITAPFAGRIETLD 207


>gi|327542388|gb|EGF28871.1| GAF domain-containing protein [Rhodopirellula baltica WH47]
          Length = 467

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 67/199 (33%), Gaps = 17/199 (8%)

Query: 226 STLELRENIH--EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM-SKLTI 282
           +  +L   I+  E +  L  +  L+ +A+ E    +        Q     AD + ++  +
Sbjct: 262 TEGQLLAKINPRELEYELAGLRALHGQADQERRGSMASHDFGKSQIAALEADRLKTQTEL 321

Query: 283 LEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           L   ++   I SPI G IV  +   S      + + L +I P      +   +  +   H
Sbjct: 322 LNHRKDNLEIRSPIDGVIVSGDWKQSEGAPLTRGETLFEIAPVGS-MKVEIAIPEENFAH 380

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           V+ G    V      D         I ++ P  + +D+           + + ++   D 
Sbjct: 381 VQPGMLTRVHTHAMPDR---VMHGAITRVHPAATIRDSEN---------VFLAEVTVDDQ 428

Query: 402 NIELRNGFPAEVLFTAKNT 420
           +  LR G            
Sbjct: 429 DGLLRPGMKGRATIYGNKR 447



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 55/146 (37%), Gaps = 13/146 (8%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R+  A+ +R T+  +  II L+     LP   ++ +  ++          S   G +++ 
Sbjct: 199 RSFRATWQRATVCVLSTIILLM----FLPAHHNIRTDVQLQPVQRRFIAVSFD-GPLQEC 253

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK----SALDFLNNKYDV 126
            V  G  + +G  L           ++ +   ++ L    D E+    ++ DF  ++   
Sbjct: 254 MVRPGDTVTEGQLLAKINP----RELEYELAGLRALHGQADQERRGSMASHDFGKSQIAA 309

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKV 152
           LE      + +LL+         S +
Sbjct: 310 LEADRLKTQTELLNHRKDNLEIRSPI 335


>gi|163844628|ref|YP_001622283.1| hypothetical protein BSUIS_B0464 [Brucella suis ATCC 23445]
 gi|163675351|gb|ABY39461.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 314

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/396 (12%), Positives = 115/396 (29%), Gaps = 85/396 (21%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M+LL +I  +  +  +            GE +    +   +      ++   V+ G ++ 
Sbjct: 1   MSLLCVIPFVSSLFAACGTQSLAVGYVEGEFVQLAPLQVAQ------VRDIAVKRGDRVE 54

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P+ T ED +                  I   ++       +  +       R E++ 
Sbjct: 55  AGEPIATVEDTD----------------ARIAVAQAEAALAQAQAQLANLQVGKRPEEIA 98

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                                    LE      RA     Q+ L
Sbjct: 99  V----------------------------------------LEAAVRSARAQADDAQRTL 118

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++L  +   +Q  L+     +  +   +R++       +  +    +E         
Sbjct: 119 LRTRDLARRGVATQAQLDDAATQLEVAEAAIRQSTANL--AVGKLPARPEEIKA------ 170

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                     +       ++L   +  R Q+TI +P AG I      +  + A  S P++
Sbjct: 171 ---------VENAVKSAKAQLQTAKWQRAQRTIEAPAAGRITDV-VRNPGDIAGPSAPVL 220

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++P      ++  +  ++   V  G         + D      +A +  + P       
Sbjct: 221 TMLP-DGAVKLKVNIPEERFSDVAVGSV----LSVHCDGCAPGLQARVSYVSPDPEFTPP 275

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + + E  + ++ + +    D    L+ G   +V  
Sbjct: 276 VIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 311


>gi|163793731|ref|ZP_02187705.1| putative HlyD-like secretion protein [alpha proteobacterium BAL199]
 gi|159180842|gb|EDP65359.1| putative HlyD-like secretion protein [alpha proteobacterium BAL199]
          Length = 364

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 76/217 (35%), Gaps = 21/217 (9%)

Query: 209 NAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKE----IS 263
             V++ +  + +R+   + L +L  +I   +      +     AN E A+ L        
Sbjct: 84  GRVARINFQEADRVEAGAVLIDLDADILSAELAKARSDVNLATANYERASTLATQGTGTL 143

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           R  ++    F    + LT+ E    +  I++P AG +V  +S S+  Y      ++++  
Sbjct: 144 RSRDEASAAFHVARANLTLAEARLAKTKIVAPFAG-VVGFRSISAGAYLSPGDSIVELA- 201

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 +  +V+   + +++ G    +          +     I  +DPI+         
Sbjct: 202 SIDPLKVDFRVSETYLPNLRVGLPVRMTVDA---RPGETIVGEIVAVDPIVDVDGRA--- 255

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                V L+       + +  L  G  A +    +  
Sbjct: 256 -----VRLR---ARVHNPDRNLLPGLFARIRIVLEQR 284



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/108 (11%), Positives = 31/108 (28%), Gaps = 4/108 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           + + G ++  ++V  I     G + +   +   ++  G  L+  +    +  +   +  +
Sbjct: 64  IRAFGTLVANESV-VISPEIPGRVARINFQEADRVEAGAVLIDLDADILSAELAKARSDV 122

Query: 104 KNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
                      T  +         D    AF      L     +   T
Sbjct: 123 NLATANYERASTLATQGTGTLRSRDEASAAFHVARANLTLAEARLAKT 170


>gi|150026154|ref|YP_001296980.1| membrane fusion efflux protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149772695|emb|CAL44178.1| Probable membrane fusion efflux protein [Flavobacterium
           psychrophilum JIP02/86]
          Length = 445

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 70/225 (31%), Gaps = 25/225 (11%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLR---HINELYDEANLEFANYLKEISR------DL 266
           LN+ +  +  +   L +   + K          +LYD+  +  A + K ++         
Sbjct: 103 LNKSQAGLSNTKAGLSQTDAQFKEAKASYERSKKLYDKGIISRAEWDKSVATYESAQAAK 162

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIV 322
           +          + +   ++   +  I +P+ GTI                     +M+ V
Sbjct: 163 QAAYYNVQSASATVNESKENLGKTAIYAPVDGTISKLGVELGERVLGTQQMAGTEMMR-V 221

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  +   V    I  +  G  A V    Y    +K+F+ I+  I    S      Q
Sbjct: 222 ADLNNMEVEVDVNENDIVKISIGDLAKVEVDAY---LKKEFRGIVTSISNSASTALTADQ 278

Query: 383 TQEYYEVILKITDLAFSD-------NNIELRNGFPAEVLFTAKNT 420
              + +V ++I   ++ D       +    R G  A V       
Sbjct: 279 VTNF-KVKVRIIKDSYQDLMSGKPASFSPFRPGMTATVDIITTRK 322



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 62/192 (32%), Gaps = 2/192 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +VS +G+I  E  V  I S  SG I    V+ G  + +G  L+       T  ++  
Sbjct: 48  VTETVSGTGKIQPEIEVK-ISSEVSGEIIALPVKEGQTVKKGDLLVQVNPKLYTQGLNKS 106

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  + N +  +    +        Y+  +K ++       ++     +  S       + 
Sbjct: 107 QAGLSNTKAGLSQTDAQFKEAKASYERSKKLYDKGIISRAEWDKSVATYESAQAAKQAAY 166

Query: 160 VY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
              +S    +   +               +  L     + +   + +     +   DLN 
Sbjct: 167 YNVQSASATVNESKENLGKTAIYAPVDGTISKLGVELGERVLGTQQMAGTEMMRVADLNN 226

Query: 219 QERIVYKSTLEL 230
            E  V  +  ++
Sbjct: 227 MEVEVDVNENDI 238


>gi|90413421|ref|ZP_01221413.1| hypothetical protein P3TCK_11764 [Photobacterium profundum 3TCK]
 gi|90325509|gb|EAS41986.1| hypothetical protein P3TCK_11764 [Photobacterium profundum 3TCK]
          Length = 348

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 91/278 (32%), Gaps = 26/278 (9%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL-----ENKSSLLRALLSSH 195
              + H    K+ N  + S    LK +L ++R    + +++         +  +  L + 
Sbjct: 90  QQVEEHQHLIKLVNSVLDSDITFLKNELKQIRKQEEHAVNINFSTYRTAINDAKNNLKAI 149

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            K         ++  VSQ D            LE        +  + +      E     
Sbjct: 150 AKIKAEYDKYLQQGQVSQVDY------AAIINLENGARQGFNRATIEYSQAYATEFQTTI 203

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  + ++ R L+Q       +   L           I+SP  G+IV     ++    +  
Sbjct: 204 AGPVAQVKRRLKQELANKVSQKEALN----------IVSPYNGSIVEILV-TNGQRVEYG 252

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             +  I P      I A + PK + +   G  A+VRFP     R +       +I   + 
Sbjct: 253 TAIATISPMIPPKVI-AYLAPKYVNNAILGNRASVRFP--DGSRYQAEITEPTEIASKLP 309

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            Q       +   + + +T     + N +   G P EV
Sbjct: 310 PQLARPFEGQPALLKVTLTFTGILEKN-QWVEGMPVEV 346



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 79/236 (33%), Gaps = 14/236 (5%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            ++   +L+++    LI     +   + +++ G I    N V + +P +G I    V+ G
Sbjct: 32  RIRWYFILALVLSPILIMIGFFIKDYVLITAPGIIT--TNPVTLSAPHNGTILNINVDKG 89

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            Q+ +   L+   +      I   K  +K +R      K     +N  +     A    +
Sbjct: 90  QQVEEHQHLIKLVNSVLDSDITFLKNELKQIR------KQEEHAVNINFSTYRTAINDAK 143

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE-NKSSLLRALLSS 194
             L             +    +S V  +  + L        NR  +E +++       + 
Sbjct: 144 NNLKAIAKIKAEYDKYLQQGQVSQVDYAAIINLENGARQGFNRATIEYSQAYATEFQTTI 203

Query: 195 HQKDLTMMKNLFEK--NAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHIN 245
                 + + L ++  N VSQ +          S +E+        E    +  I+
Sbjct: 204 AGPVAQVKRRLKQELANKVSQKEALNIVSPYNGSIVEILVTNGQRVEYGTAIATIS 259


>gi|30264639|ref|NP_847016.1| hypothetical protein BA_4813 [Bacillus anthracis str. Ames]
 gi|47530110|ref|YP_021459.1| hypothetical protein GBAA_4813 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187460|ref|YP_030712.1| hypothetical protein BAS4465 [Bacillus anthracis str. Sterne]
 gi|49480684|ref|YP_038615.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140939|ref|YP_085890.1| multidrug resistance protein A [Bacillus cereus E33L]
 gi|165871490|ref|ZP_02216137.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167635594|ref|ZP_02393906.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|167641591|ref|ZP_02399838.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|170688305|ref|ZP_02879515.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|170708730|ref|ZP_02899168.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|177653135|ref|ZP_02935422.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|196034472|ref|ZP_03101881.1| conserved hypothetical protein [Bacillus cereus W]
 gi|196042131|ref|ZP_03109415.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|217962048|ref|YP_002340618.1| hypothetical protein BCAH187_A4693 [Bacillus cereus AH187]
 gi|218905796|ref|YP_002453630.1| hypothetical protein BCAH820_4684 [Bacillus cereus AH820]
 gi|222098031|ref|YP_002532088.1| multidrug resistance protein a [Bacillus cereus Q1]
 gi|227817353|ref|YP_002817362.1| hypothetical protein BAMEG_4843 [Bacillus anthracis str. CDC 684]
 gi|229600342|ref|YP_002868848.1| hypothetical protein BAA_4823 [Bacillus anthracis str. A0248]
 gi|254686938|ref|ZP_05150796.1| hypothetical protein BantC_24294 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254724502|ref|ZP_05186285.1| hypothetical protein BantA1_18875 [Bacillus anthracis str. A1055]
 gi|254736677|ref|ZP_05194383.1| hypothetical protein BantWNA_16051 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254741715|ref|ZP_05199402.1| hypothetical protein BantKB_11987 [Bacillus anthracis str. Kruger
           B]
 gi|254754688|ref|ZP_05206723.1| hypothetical protein BantV_19567 [Bacillus anthracis str. Vollum]
 gi|254757520|ref|ZP_05209547.1| hypothetical protein BantA9_04356 [Bacillus anthracis str.
           Australia 94]
 gi|301056075|ref|YP_003794286.1| multidrug resistance protein A [Bacillus anthracis CI]
 gi|30259297|gb|AAP28502.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
 gi|47505258|gb|AAT33934.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49181387|gb|AAT56763.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
 gi|49332240|gb|AAT62886.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51974408|gb|AAU15958.1| multidrug resistance protein A [Bacillus cereus E33L]
 gi|164712787|gb|EDR18317.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167510476|gb|EDR85875.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|167529014|gb|EDR91769.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|170126410|gb|EDS95299.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|170667811|gb|EDT18564.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|172081659|gb|EDT66730.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|195993014|gb|EDX56973.1| conserved hypothetical protein [Bacillus cereus W]
 gi|196027067|gb|EDX65690.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|217066036|gb|ACJ80286.1| conserved hypothetical protein [Bacillus cereus AH187]
 gi|218537132|gb|ACK89530.1| conserved hypothetical protein [Bacillus cereus AH820]
 gi|221242089|gb|ACM14799.1| multidrug resistance protein A [Bacillus cereus Q1]
 gi|227003889|gb|ACP13632.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
 gi|229264750|gb|ACQ46387.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
 gi|300378244|gb|ADK07148.1| multidrug resistance protein A [Bacillus cereus biovar anthracis
           str. CI]
          Length = 217

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 57  KLTDWKAEVGKNYNEN-----DKLGAVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 110

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 111 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LTGKVEQVGL 166

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 167 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 216


>gi|322493038|emb|CBZ28323.1| conserved hypothetical protein [Leishmania mexicana
            MHOM/GT/2001/U1103]
          Length = 1605

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 84/261 (32%), Gaps = 32/261 (12%)

Query: 85   LTFE-DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L  + D E+  +   ++ +++  R      K     +      LE+  E R  +L    G
Sbjct: 1147 LELDTDSESQSVFQKQQGTLQRARERFLHLKGEGAVMRKNAMRLEREIEVRTNELQLLDG 1206

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                         + S    L  ++ ++      R  +  K   +   L    ++L   K
Sbjct: 1207 A---------KAALQSQLTDLTQQVAQLHQDIDERDSVTEKKEKVIYSLKKRNQELEKHK 1257

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                   V  + + + +  +     E+ E   E K    ++ E +  +NL      +E+ 
Sbjct: 1258 ------YVLDHQIRELKGQIEPKQREIAELNQETKQQNANLEEQHT-SNLTLRQNTEELK 1310

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            +D+ + QRT    + +L  LE  R +                      A + Q    +  
Sbjct: 1311 KDIAEQQRTLQARLRELQGLETYRSRAE--------------RDIGELAHELQDPASLAA 1356

Query: 324  HSKLTYIRAKVTPKQIQHVKK 344
                 Y    V P+ ++ +  
Sbjct: 1357 AVAQLY-EVHVAPRDVKQIAP 1376



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 76/221 (34%), Gaps = 11/221 (4%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
               L  ++    D     +      +  +DT       L ++ +  + A  +  + L   
Sbjct: 1044 QTFLDVKNETVRDAAQTLEEVEMKRQREVDTLADECGALQHRLETRKVAHAAELKALRAS 1103

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMR------SIYLNRLDLE---NKSSLLRALL 192
            L +  +     F   +S    +++    ++        + L++L+L+      S+ +   
Sbjct: 1104 LAQARTEDEAHFQDVLSQRTEAVRKLHRQLEHSHDTNRVTLHQLELDTDSESQSVFQKQQ 1163

Query: 193  SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
             + Q+      +L  + AV + +  + ER +   T EL+     +  +   + +L  +  
Sbjct: 1164 GTLQRARERFLHLKGEGAVMRKNAMRLEREIEVRTNELQLLDGAKAALQSQLTDLTQQVA 1223

Query: 253  L--EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               +  +    ++   E+   +      +L   +   + + 
Sbjct: 1224 QLHQDIDERDSVTEKKEKVIYSLKKRNQELEKHKYVLDHQI 1264



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 66/199 (33%), Gaps = 8/199 (4%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            T+ + + K  ++  R  I++ +  ++ L    +  +K    R         +  +   + 
Sbjct: 968  TEEVLVTKQEMEEQRIEIESLQQYIEKLKTDMESEDK----RRAHEQGTRARERAEELQQ 1023

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                +++ Y +L+         +L+  + E      + L     K    +  L ++    
Sbjct: 1024 DAIALAAEYDALQHAKADQEQTFLDVKN-ETVRDAAQTLEEVEMKRQREVDTLADECGAL 1082

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            Q+ L   E        EL+                + +   +    ++++ R LE +  T
Sbjct: 1083 QHRL---ETRKVAHAAELKALRASLAQARTEDEAHFQDVLSQRTEAVRKLHRQLEHSHDT 1139

Query: 273  FADEMSKLTILEKTREQKT 291
                + +L +   +  Q  
Sbjct: 1140 NRVTLHQLELDTDSESQSV 1158


>gi|309782552|ref|ZP_07677275.1| methyltransferase, FkbM family [Ralstonia sp. 5_7_47FAA]
 gi|308918643|gb|EFP64317.1| methyltransferase, FkbM family [Ralstonia sp. 5_7_47FAA]
          Length = 883

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 78/215 (36%), Gaps = 7/215 (3%)

Query: 71  QVENG-SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
            V+ G + + +   L+         L+   + S   LR  +    +    L  +   + +
Sbjct: 302 LVDQGRANVEKEQSLMRDHANRVESLLQQLQASETELRQLMQEGAARERELTRQAAQIRE 361

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             +     L+    ++     +   +G  ++          +R +   +  +E +  L +
Sbjct: 362 EVDELLRTLVQREKEFSQELMQTRQHGEQALADQFYASQAELRRLA--QEGIEREQVLTQ 419

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L   Q+   +++++ ++ +    +L Q  R   + T E      E +  LRH     +
Sbjct: 420 HNLQVRQQMEALLRSVAQRESDFARELLQTRREAEQITAEQARVHAELERTLRHEGAERE 479

Query: 250 EANLEFANYLK----EISRDLEQNQRTFADEMSKL 280
            A  E    L+    E+   L Q +  F+ E+ ++
Sbjct: 480 HALTEQIGQLRLEVKELLHSLAQRESEFSRELQQV 514



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/205 (10%), Positives = 64/205 (31%), Gaps = 3/205 (1%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
                +     L +   K        E +       +         + + +L     +  
Sbjct: 225 LNGTASAPFCHLVQAHHKTQVDCAQAELAQAKHTAQQEITRLTDALATQRELHTKQEQAL 284

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               +  N  +  +  +L  +     ++   +  + + ++ + +LL   Q   T ++ L 
Sbjct: 285 GEQLRASNDAVHQLESTLVDQ--GRANVEKEQSLMRDHANRVESLLQQLQASETELRQLM 342

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH-INELYDEANLEFANYLKEISRD 265
           ++ A  + +L +Q   + +   EL   + +++      + +         A+       +
Sbjct: 343 QEGAARERELTRQAAQIREEVDELLRTLVQREKEFSQELMQTRQHGEQALADQFYASQAE 402

Query: 266 LEQNQRTFADEMSKLTILEKTREQK 290
           L +  +   +    LT       Q+
Sbjct: 403 LRRLAQEGIEREQVLTQHNLQVRQQ 427



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 61/166 (36%), Gaps = 3/166 (1%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               + ++++ +  R H + E++       +   L +       ++ + L       S+ 
Sbjct: 448 QTRREAEQITAEQARVHAELERTLRHEGAEREHALTEQIGQLRLEVKELLHSLAQRESE- 506

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           F+  +  V+R  +  +     ++  R    ++   +    L S+  +     + L ++ +
Sbjct: 507 FSRELQQVHRDAQQAVGEQARVHAERDQALVQQLLTAHAELRSAEARGRDRERQLDQEIS 566

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +Q  L Q  +       +LRE +   ++    +    D  +  FA
Sbjct: 567 STQAKLIQLTQAHATLEAQLREQMAAAQHTTLALKASLDAIHTSFA 612


>gi|308049005|ref|YP_003912571.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
 gi|307631195|gb|ADN75497.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
          Length = 360

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 72/204 (35%), Gaps = 27/204 (13%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            ++  V    L+  ++   +   E R  + E K +L     L D+  +         + +
Sbjct: 87  VKQGQV-LARLDDLQQTAQRD--EARAYLAEAKRLLAERRRLADKGAIS--------ASE 135

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L   +   A   ++L   E    ++T+ +P  G +V   S +        + LM +   +
Sbjct: 136 LAAQEAEVAMADARLASAEAELAKRTLRAPFDG-VVGLVSHAPGAQVVSGEALMTLDELN 194

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               +   V  + +  ++ G   + R   Y ++    F   +  +D  ++  D  +  + 
Sbjct: 195 -RLRLDLAVPQRYLAALQPGQQVSARIDAYPEL---GFDGTLVALDSRVNANDMTVAARF 250

Query: 386 YYEVILKITDLAFSDNNIELRNGF 409
                      AF + +  L+ G 
Sbjct: 251 -----------AFDNRDGYLKPGM 263



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 61/153 (39%), Gaps = 7/153 (4%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V I    SG +    V++G ++ QG  L   +D++ T   D  +  +   +  +  E+
Sbjct: 64  QAVTIAPEVSGRLVALMVDSGDKVKQGQVLARLDDLQQTAQRDEARAYLAEAK-RLLAER 122

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT---RM 171
             L    +K  +      ++E ++     +  S  +++    + + +  +   ++     
Sbjct: 123 RRL---ADKGAISASELAAQEAEVAMADARLASAEAELAKRTLRAPFDGVVGLVSHAPGA 179

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           + +    L   ++ + LR  L+  Q+ L  ++ 
Sbjct: 180 QVVSGEALMTLDELNRLRLDLAVPQRYLAALQP 212


>gi|121604351|ref|YP_981680.1| secretion protein HlyD family protein [Polaromonas
           naphthalenivorans CJ2]
 gi|120593320|gb|ABM36759.1| secretion protein HlyD family protein [Polaromonas
           naphthalenivorans CJ2]
          Length = 444

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 89/285 (31%), Gaps = 29/285 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------LLSSHQKDLTMMKNLFEK 208
            +      L   + + R++Y N   L  + +L  A        ++    DL   ++L   
Sbjct: 108 ALDQAEAGLAQAVRQARTLYANNGSLAAQIALRDADVSKANSEIARAADDLKRRESLTGN 167

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            AVS+ +LN  +  +  +   L             +                       +
Sbjct: 168 GAVSREELNHAQTQLANAKSALAAAQAGVIAAREQLGSNQALTEGTSI-----------E 216

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
              +     +K+       ++  + +P+ G +   ++           PLM ++P +   
Sbjct: 217 QHPSVQVAAAKVREAFLASQRTALTAPVDGYVAK-RTVQLGQRVAAGTPLMSVIPLN-QV 274

Query: 329 YIRAKVTPKQIQHVKKGYTATV------RFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           ++ A     Q+++++ G   T+      +   Y                 + +Q      
Sbjct: 275 WVDANFKEVQLRNIRIGQPVTLVADLYGKKVDYQGTVAGLGVGTGAAFSLLPAQNATGNW 334

Query: 383 TQEYYEVILKITDLAFSDNNIELRNG--FPAEVLFTAKN-TTLAQ 424
            +    V ++I           LR G    AEV  + ++  TLA 
Sbjct: 335 IKVVQRVPVRIALEPKQLAEHPLRVGLSMDAEVDVSKQDGKTLAD 379



 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 60/185 (32%), Gaps = 3/185 (1%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPI-EISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +P   K +T L+ + ++  + W+    +      S+     + NV++I     G +    
Sbjct: 25  NPKRRKALTALASVVVVAGLGWAAYEYLVASHYESTDNAYVQGNVIQITPQIGGTVIALM 84

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            ++   +  G PL+  +  +    +D  +  +        T  +    L  +  + +   
Sbjct: 85  ADDTDFVKAGQPLVQLDPADAKVALDQAEAGLAQAVRQARTLYANNGSLAAQIALRDADV 144

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                ++           S   N  +S     L    T++ +        +      R  
Sbjct: 145 SKANSEIARAADDLKRRESLTGNGAVS--REELNHAQTQLANAKSALAAAQAGVIAAREQ 202

Query: 192 LSSHQ 196
           L S+Q
Sbjct: 203 LGSNQ 207


>gi|330501653|ref|YP_004378522.1| hypothetical protein MDS_0739 [Pseudomonas mendocina NK-01]
 gi|328915939|gb|AEB56770.1| hypothetical protein MDS_0739 [Pseudomonas mendocina NK-01]
          Length = 439

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 74/217 (34%), Gaps = 7/217 (3%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           ++ I G ++  +L+P+  SV +  E++     V       G+I +F V+    +  G  L
Sbjct: 177 LLAIAGALSLLLLIPVRQSVLAPAEVVPLGGRVVAAPLD-GVITEFLVKPNQSVAAGDLL 235

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDF 141
           + F+        D+ + ++      +             + + D+L    E +  +    
Sbjct: 236 VRFDATSLKAQSDVAERALGVAEAELKANSQRAFADAESSARLDLLAARVEQKRAERDYA 295

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                 +  +    GI+    +   +LT        RL      S     +     D   
Sbjct: 296 RQLLARSEVRAERAGIAVFADA--ERLTGKPVQTGERLMQIADPSQAELRIELPVGDAIA 353

Query: 202 MKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQ 237
           ++   E    +  N LN+ E  + +S  E +     Q
Sbjct: 354 LQPGAEVALFLDSNPLNRHEAQLERSAYEAQTTAAGQ 390



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 45/132 (34%), Gaps = 7/132 (5%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            ++L+ + ++ E+      + E   +AN + A    E S  L+        + ++     
Sbjct: 240 ATSLKAQSDVAERA---LGVAEAELKANSQRAFADAESSARLDLLAARVEQKRAERDYAR 296

Query: 285 KTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHV 342
           +   +  + +  AG  +  +    +    Q  + LM+I  P      I   +       +
Sbjct: 297 QLLARSEVRAERAGIAVFADAERLTGKPVQTGERLMQIADPSQAELRIE--LPVGDAIAL 354

Query: 343 KKGYTATVRFPH 354
           + G    +    
Sbjct: 355 QPGAEVALFLDS 366


>gi|302039035|ref|YP_003799357.1| putative cation efflux system protein CzcB [Candidatus Nitrospira
           defluvii]
 gi|300607099|emb|CBK43432.1| putative Cation efflux system protein CzcB [Candidatus Nitrospira
           defluvii]
          Length = 382

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 92/275 (33%), Gaps = 26/275 (9%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKDLT 200
           + K   T  + F   + +    L    T +R   +   +D+         L      DL 
Sbjct: 51  VKKEPFTFHREFPATVQANENELAEVTTLIRGRVVEVLVDVGKDVKKGERLALLDSTDLG 110

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           M +  + K+A  Q++         +   E  EN+HE +  +        EA ++ A    
Sbjct: 111 MAEGAYLKSAARQHE--------AQLAFERAENLHEHR-AISLAELQRREAEMKTARADA 161

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
             +          A E+ +L   +  R    I +P AG ++  ++ +     + S+    
Sbjct: 162 REASHRLALLGVPAQELQRLEREQTIRSDVAIRAPFAGRVI-MRNITRGEVVETSRNCFT 220

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           I   S +  + A V  K ++ V+      V  P Y       F   +  I  ++      
Sbjct: 221 IADLSDVWVV-ANVPEKDVRFVRPKDRVHVMVPAYP---HGLFSGTVTYISDVLDPSTRT 276

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   + +++T     + +  L+    A V  
Sbjct: 277 --------MRVRVT---VLNPDRTLKPEMFAMVRV 300



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 42/129 (32%), Gaps = 3/129 (2%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT-DLIDLKKVSIKNLRCHIDTEKSA 116
           E+ +   G + +  V+ G  + +G  L   +  +         K + +     +  E++ 
Sbjct: 75  EVTTLIRGRVVEVLVDVGKDVKKGERLALLDSTDLGMAEGAYLKSAARQHEAQLAFERA- 133

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + L+    +     + RE ++            ++   G+ +       +   +RS   
Sbjct: 134 -ENLHEHRAISLAELQRREAEMKTARADAREASHRLALLGVPAQELQRLEREQTIRSDVA 192

Query: 177 NRLDLENKS 185
            R     + 
Sbjct: 193 IRAPFAGRV 201


>gi|319940953|ref|ZP_08015290.1| hypothetical protein HMPREF9464_00509 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805526|gb|EFW02321.1| hypothetical protein HMPREF9464_00509 [Sutterella wadsworthensis
           3_1_45B]
          Length = 345

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 52/352 (14%), Positives = 119/352 (33%), Gaps = 79/352 (22%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I     E G ++ +G PL   +              ++ L+  ++   + L+ L+ 
Sbjct: 53  TSGRIASLAKEEGERVKKGEPLGELD--------------LRALKIELERTAAQLEGLDA 98

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            + +  + + + E        +   + +K+    ++   +  +  +   +++   R + +
Sbjct: 99  DWKLALEGYRTEEIDAARAQAEAAESSAKLAQTTLARTQKLYRAHVASDQALDEARSNAD 158

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           N + +  A  +   +    ++                         E+R     +     
Sbjct: 159 NLTKVFAAAQADLARLTAGLRP-----------------------EEIRAKKAARDA--- 192

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                  EA L+  +Y  +++                            I SP+ G I  
Sbjct: 193 ------GEAALKALDYQIDVA--------------------------SRIESPVDGVI-R 219

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           ++     + A  S+ + +I   +   ++RA VT  Q+  +K+G  A +            
Sbjct: 220 SRLLEPGDMASASKRVYEIA-VTSPKWVRAYVTETQLGFIKEGAPARI-----TTDTTPA 273

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           ++A +  I P        +QTQ+   +++    L  SD   +LR G P  V 
Sbjct: 274 YEATVGYISPEAEFTPKTVQTQDLRTLLVYEIRLTLSDPENKLRLGQPVTVD 325


>gi|317132108|ref|YP_004091422.1| efflux transporter, RND family, MFP subunit [Ethanoligenens
           harbinense YUAN-3]
 gi|315470087|gb|ADU26691.1| efflux transporter, RND family, MFP subunit [Ethanoligenens
           harbinense YUAN-3]
          Length = 644

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 53/175 (30%), Gaps = 15/175 (8%)

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           N++  +    F      ++  +  +Q+   +  + L   +   +   I SP+ GT+    
Sbjct: 319 NQMVSKTQNLFKLDGTSLNSTITADQQAVTNAQNDLASAQAAVDANNITSPVNGTVTAVD 378

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                + A     +  I P       +  V    I  VK G T  V     +        
Sbjct: 379 VKVGDSVASGGNVVGVIDPT--QMQTQVTVNESDIDSVKTGQTVHVTLSALSGTAY---T 433

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +  ++ I      N      + V + I+      N   +  G    V    ++
Sbjct: 434 GTVTDVNTI----GTNSNGVATFNVTIGIS------NPTNILVGMSTNVEIVTQS 478



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 38/86 (44%), Gaps = 1/86 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +E +VS +G + N      + +P +G +    V++G  + QG  L          
Sbjct: 72  ARTGSVEKTVSGTGTVSNSAE-ETLTAPDAGTVDSVSVKDGDTVKQGQVLAHINSPTAQQ 130

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFL 120
            ++ K+ ++   +  + + +++L  L
Sbjct: 131 TLESKQTALTQAQNTLASAQASLSNL 156


>gi|226312841|ref|YP_002772735.1| efflux system [Brevibacillus brevis NBRC 100599]
 gi|226095789|dbj|BAH44231.1| putative efflux system [Brevibacillus brevis NBRC 100599]
          Length = 401

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 106/292 (36%), Gaps = 37/292 (12%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            + +V + A  ++ + L      Y+    +     + S        L    +  +++  L
Sbjct: 68  ERMNVTKGAKVTQGQVLSSLNTNYYQKGLEAAQSQVQSASALRSKTLQGASADLISKQRL 127

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
              S   R  L   Q+     + LF+  A+SQ++L+  +    +  + L+E       +L
Sbjct: 128 AVDSQEKR--LKDAQRKWETARELFKGGAISQSELDSAQSEKEQIEISLQEARITLDKLL 185

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           +                      ++           S++ + +KT ++  +++P +GT++
Sbjct: 186 KGAE-----------------VNEIASADANLKQAASEVELAKKTLQETQLVAPFSGTVI 228

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                +  + AQ  Q ++ +V       ++  V     ++ K+G T  V         + 
Sbjct: 229 DVTQKA-GSLAQPGQSIIHLV-DGSEVKLKVDVPLDVRENYKQGDTVPVAVEG-----KA 281

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           K    I  I P+++++         Y V + ++     + +  L  G  A V
Sbjct: 282 KITGTITFISPVLNEETGK------YLVEIAVS-----NKDNVLIEGMVATV 322


>gi|319790105|ref|YP_004151738.1| efflux transporter, RND family, MFP subunit [Thermovibrio
           ammonificans HB-1]
 gi|317114607|gb|ADU97097.1| efflux transporter, RND family, MFP subunit [Thermovibrio
           ammonificans HB-1]
          Length = 413

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 56/378 (14%), Positives = 120/378 (31%), Gaps = 77/378 (20%)

Query: 46  SSGEILNE-DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           ++G I  +    +++ +  SG + K  V+ G  + +G  +   ++              +
Sbjct: 48  ATGIIKPQVGAEIKVGARISGTVVKENVKVGDFVKKGDLIAVIDN--------------R 93

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L+  +   ++ L+ +   Y                   +  +    +     + + ++ 
Sbjct: 94  ELKEALKRARANLEEIKRSYP------------------ERIARQKFLVESAKTQLKQAE 135

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                   +  + +   E +  LL    ++ +K     + L    A+++++L   +  V 
Sbjct: 136 AKLKAEEENYRVKKWKFERQKELLSIGYTTPEKFKEAKQAL----ALAESNLKAAKEGVK 191

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           ++   L+    E K +             EF   LK+   DL+Q Q  ++          
Sbjct: 192 QALYNLKAQEAELKRLKA-----------EFQENLKKAEADLKQAQIRYS---------- 230

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR--AKVTPKQIQHV 342
                  I +P++G I +  S              + V       +     V   +I  V
Sbjct: 231 ----YSYIYAPMSGIISFV-STQKGETVVAGLNAPQFVTILDPKRLENWIYVDETEIGKV 285

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           KKG         Y     K FK  + +I P    +   L    YY V+ +     F +  
Sbjct: 286 KKGMPVEFTVDAYP---GKVFKGKVVEIYP----KPKILNNVVYYIVVAR----GFKNVE 334

Query: 403 IELRNGFPAEVLFTAKNT 420
           + LR          A   
Sbjct: 335 L-LRPEMTTHNTVIAGVR 351


>gi|302038614|ref|YP_003798936.1| putative membrane-fusion protein [Candidatus Nitrospira defluvii]
 gi|300606678|emb|CBK43011.1| putative Membrane-fusion protein [Candidatus Nitrospira defluvii]
          Length = 330

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 74/193 (38%), Gaps = 6/193 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P E +V+++G I   +  V I  P +G++    V  G ++ +G PLL  +D +    + 
Sbjct: 42  SPYETTVAATGIIEAANENVRIGPPMAGLVTNVFVTVGDRVREGDPLLQLDDRDLRAQLV 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK-YHSTCSKVFNYG 156
            ++ +I      ++ +K  +  L+ +   L+   +SR     D     Y S  +K     
Sbjct: 102 ARQAAIPPAEAQVEEQKYRIGDLDTQLKRLKSVRDSRAVSEDDVKRTWYASEMAKRALNR 161

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM----MKNLFEKNAVS 212
             +  + +  +      + L+RL +    +     ++    +  +     + L     + 
Sbjct: 162 YEATLKQVIAQRDET-QMLLDRLTVRAPRAATILQVNVRAGEFALTTGATEPLMLLGDIQ 220

Query: 213 QNDLNQQERIVYK 225
           Q  +  +   V  
Sbjct: 221 QLQVRAEVDEVNA 233



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 73/218 (33%), Gaps = 9/218 (4%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLEFANYLKE 261
           ++L  +    Q  +   E  V +    + +   + K +     +    E +++   Y  E
Sbjct: 94  RDLRAQLVARQAAIPPAEAQVEEQKYRIGDLDTQLKRLKSVRDSRAVSEDDVKRTWYASE 153

Query: 262 IS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPL 318
           ++ R L + + T    +++    +   ++ T+ +P A TI+     +          +PL
Sbjct: 154 MAKRALNRYEATLKQVIAQRDETQMLLDRLTVRAPRAATILQVNVRAGEFALTTGATEPL 213

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-IISQQ 377
           M +    +   +RA+V       V           +      +       +I+P I+ ++
Sbjct: 214 MLLG-DIQQLQVRAEVDEVNAPLVAPNRPG---IAYLKGNTAQAIPLTFVRIEPYIVPKK 269

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                  E  +  +      F      +  G   +V  
Sbjct: 270 SLTGDNSERVDTRVLQIIYRFERPAFPIYAGQQVDVFI 307


>gi|242241418|ref|YP_002989599.1| secretion protein HlyD [Dickeya dadantii Ech703]
 gi|242133475|gb|ACS87777.1| secretion protein HlyD family protein [Dickeya dadantii Ech703]
          Length = 418

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/326 (15%), Positives = 107/326 (32%), Gaps = 42/326 (12%)

Query: 102 SIKNLRCHIDTEKSALDFL--NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            +   R  +       D +     +D +       E Q +D   +     +   +  +  
Sbjct: 53  QLLETRLGLVGRIRPADEITIAAPFDGMINTLPVSEGQRVDAGQELAVMDATQLDIQLRQ 112

Query: 160 VYRSLKMKLTRMRSIY--LNRLDLENKSSLL---RALLSSHQKDLTMMKNLFEKNAVSQN 214
               L      M ++    N  D+      L   +  L+  +  L   + LF +  V++ 
Sbjct: 113 AKAELLKADQVMENLRNWDNGPDVARARRTLNTAKTTLAHTESALNDTRELFRRGIVARM 172

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +++   + V     +L   +  Q+ M   I + + E              D +      A
Sbjct: 173 EVDTLMQQVQSQRQDL---VAAQEEMQAVIGKGHGE--------------DRQIAGMEQA 215

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS-------NY-AQQSQPLMKIVPHSK 326
           +  S+  +L+   E++TI +P AG I+ +    +             Q  PL +++  + 
Sbjct: 216 NAQSRYRLLQALYERRTITAPFAGFILKSTQPETGKPAALQPGVQVNQGTPLFRLI-QAN 274

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A+V    +  +++     +    +A         +   I  +  Q D       Y
Sbjct: 275 RLQVAARVEETDLHRLRENMPVLITGDGFAGT------VLNGHIASLGIQADTRDAGA-Y 327

Query: 387 YEVILKITDLAFSDNNIELRNGFPAE 412
           Y+VI+ +           L  G  A+
Sbjct: 328 YDVIVAVDTPVNPHQPPRL--GMTAQ 351



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 63/174 (36%), Gaps = 14/174 (8%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G I   D +  I +PF G+I    V  G ++  G  L   +  +    +D++    K   
Sbjct: 63  GRIRPADEI-TIAAPFDGMINTLPVSEGQRVDAGQELAVMDATQ----LDIQLRQAKAEL 117

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
              D     L   +N  DV      +R  + L+      +      N       R +  +
Sbjct: 118 LKADQVMENLRNWDNGPDV------ARARRTLNTAKTTLAHTESALNDTRELFRRGIVAR 171

Query: 168 L---TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +   T M+ +   R DL      ++A++     +   +  + + NA S+  L Q
Sbjct: 172 MEVDTLMQQVQSQRQDLVAAQEEMQAVIGKGHGEDRQIAGMEQANAQSRYRLLQ 225


>gi|157737238|ref|YP_001489921.1| AcrA/AcrE family protein [Arcobacter butzleri RM4018]
 gi|157699092|gb|ABV67252.1| AcrA/AcrE family protein [Arcobacter butzleri RM4018]
          Length = 241

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 10/138 (7%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L +I ++ +  ++  L ++  V         +N   I S   G I K  V  G ++ +G 
Sbjct: 4   LLLIQLLFINLFATTLELDGMVE-------SENEKVISSKMMGYITKINVNEGDKVKKGD 56

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLL 139
            L   +    +   D+ K  +KNL  ++   K+ LD        Y+ LE    S + +L 
Sbjct: 57  ILYEIDASNISYNADILKNQVKNLELNLKRYKNLLDQDLVSKYDYEQLELNLISAKAKLS 116

Query: 140 DFLGKYHSTCSKVFNYGI 157
           +   +Y     K  N G+
Sbjct: 117 ELNAQYDYLKIKATNNGL 134



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 52/182 (28%), Gaps = 23/182 (12%)

Query: 244 INELYDEANLEFANYLKEISRDL------EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +        L    Y   + +DL      EQ +       +KL+ L    +   I +   
Sbjct: 73  LKNQVKNLELNLKRYKNLLDQDLVSKYDYEQLELNLISAKAKLSELNAQYDYLKIKATNN 132

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G IV  +S      A    P M I+       I+  +    ++ +K      +  P    
Sbjct: 133 GLIVK-KSIKEGEMAMPGMPHM-ILTDLDSLIIKTNIAESMLKDIKLNQEVKITIPSQNY 190

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
               K  AI   I            T  +         ++F   N  +     A++    
Sbjct: 191 ESIGKIVAIFPNI---------ISNTHSF------TLKISFDKKNFNIYPNMYAKIFMQI 235

Query: 418 KN 419
            +
Sbjct: 236 GS 237


>gi|158520635|ref|YP_001528505.1| putative phytochrome sensor protein [Desulfococcus oleovorans Hxd3]
 gi|158509461|gb|ABW66428.1| putative phytochrome sensor protein [Desulfococcus oleovorans Hxd3]
          Length = 615

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 14/153 (9%)

Query: 281 TILEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
            + E   E+  + +P AG ++  + +       +Q + L +I P      I  KV  ++I
Sbjct: 465 EMAETRLERVGLRAPFAGVLLSGDLTQRLGGAVRQGEELFQIAPLDAYRVI-LKVNERRI 523

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             V +G + T+      +         + KI P+ + ++ N     Y+ V   +   +  
Sbjct: 524 TDVVEGQSGTLVLSSLPEETYGF---TVTKITPVTTPEEGN----NYFRVEAALDSPSPL 576

Query: 400 DNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
                LR G             L      P+ +
Sbjct: 577 -----LRPGMEGVGKIHVDRRLLVSIWTRPLFE 604


>gi|315636953|ref|ZP_07892177.1| AcrA/AcrE family protein [Arcobacter butzleri JV22]
 gi|315478783|gb|EFU69492.1| AcrA/AcrE family protein [Arcobacter butzleri JV22]
          Length = 241

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 10/138 (7%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L +I ++ +  ++  L ++ +V         +N   I S   G I K  V  G  + +G 
Sbjct: 4   LLLIQLLFINLFATTLELDGTVE-------SENEKVISSKMMGYITKINVTEGDNVKKGD 56

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLL 139
            L   +    +   D+ K  +KNL  ++   K+ LD        Y+ LE    S + +L 
Sbjct: 57  ILYEIDASNISYNADILKNQVKNLELNLKRYKNLLDQDLVSKYDYEQLELNLISAKAKLS 116

Query: 140 DFLGKYHSTCSKVFNYGI 157
           +   +Y     K  N G+
Sbjct: 117 ELNAQYDYLKIKATNNGL 134



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 52/182 (28%), Gaps = 23/182 (12%)

Query: 244 INELYDEANLEFANYLKEISRDL------EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +        L    Y   + +DL      EQ +       +KL+ L    +   I +   
Sbjct: 73  LKNQVKNLELNLKRYKNLLDQDLVSKYDYEQLELNLISAKAKLSELNAQYDYLKIKATNN 132

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G IV  +S      A    P M I+       I+  +    ++ +K      +  P    
Sbjct: 133 GLIVK-KSIKEGEMAMPGMPHM-ILTDLDSLIIKTNIAESMLKDIKLNQEVKITIPSQNY 190

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
               K  AI   +            T  +         ++F   +  +     A++    
Sbjct: 191 ESIGKIVAIFPNV---------ISNTHSF------TLKISFDKKDFNIYPNMYAKIFIQI 235

Query: 418 KN 419
            +
Sbjct: 236 GS 237


>gi|258593896|emb|CBE70239.1| Periplasmic component of efflux system [NC10 bacterium 'Dutch
           sediment']
          Length = 441

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 61/198 (30%), Gaps = 14/198 (7%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +   + R  + ++  + R   +     +       +      E  +     + + +   
Sbjct: 153 ARVKRDSRVQLFQEGGISREERDTAQTTHDATVASRRAAQAQFEAARAQVDQKRAAVAQA 212

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQH 341
           +   +  +I +P+AGT+V          A   Q   L  +  +     +   V    +  
Sbjct: 213 QVDLDHTSIRAPVAGTVVSRNVDVGQTVAATLQAPVLFTLAENLAKMELHVDVDEADVGR 272

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           V+ G  AT     + D         + +I  +            Y  V      L   ++
Sbjct: 273 VRAGQPATFTVDAFPDRTF------LARITQVRYGAKTVSGVVTYETV------LTLDNS 320

Query: 402 NIELRNGFPAEVLFTAKN 419
           ++ LR G  A  + T + 
Sbjct: 321 DLSLRPGMTATAVITVQK 338



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 53/161 (32%), Gaps = 10/161 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + ++V ++G +     V  + S  SGII++ + +  S + +G  +   +       +   
Sbjct: 67  LTVTVKATGTLNAVTTVQ-VGSQVSGIIRELKADFNSPVKKGQLIARIDPDLFETKLAQV 125

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  ++          +       + DV+    + R+ ++             +      +
Sbjct: 126 QADLQA---------AQAAVARAEADVVNADVQVRDARVKRDSRVQLFQEGGISREERDT 176

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
              +    +   R+          +    RA ++  Q DL 
Sbjct: 177 AQTTHDATVASRRAAQAQFEAARAQVDQKRAAVAQAQVDLD 217


>gi|255019592|ref|ZP_05291674.1| multidrug resistance efflux pump [Acidithiobacillus caldus ATCC
           51756]
 gi|254970969|gb|EET28449.1| multidrug resistance efflux pump [Acidithiobacillus caldus ATCC
           51756]
          Length = 350

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 95/287 (33%), Gaps = 19/287 (6%)

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI----YLNRLDLENKSSLLRALLSSHQKD 198
            +      +V  Y   +V     +   R R +       +  +  +     ALL+     
Sbjct: 42  AQVSGQVDQVLAYDTEAVRAGQVLVRLRARRLVATLQAAKAKVARERDEAEALLAQIDAA 101

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYK-STLELRENIHEQKNMLRHINELYDEANLEFAN 257
              ++ L  +   ++    +        ++ EL   + +Q+  ++ +     EA  E   
Sbjct: 102 QARVQALSAQLVAARARSQRLGLAARSGASAELDAIVAQQR--VQELQSQRREAEAELVA 159

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
             K++               ++LT+     ++++I +P+AG I+  ++     + Q  Q 
Sbjct: 160 LKKQLGEHGPAAYPPLRQAQAELTLARIDWQRRSIRAPVAG-ILAQEAVQPGEHIQPGQR 218

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L  ++P +   ++ A V   ++  V+ G    +R   Y      +++  +  I      +
Sbjct: 219 LFTLIPLN-QIWVDAYVKETRLAGVELGSEVQLRSDLYGGGV--RYRGRVVGIGAATGAE 275

Query: 378 DNNLQTQEY--------YEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              L  +            V ++I           LR G        
Sbjct: 276 FAVLPPENASGNWIKFTQRVPVRILVDTRDLGAHPLRPGLTMHADIR 322



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 48/144 (33%), Gaps = 9/144 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + N   I +  SG + +    +   +  G  L+                +++  +  + 
Sbjct: 33  VQGNKYPITAQVSGQVDQVLAYDTEAVRAGQVLVRL-------RARRLVATLQAAKAKVA 85

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E+   + L  + D  +   ++   QL+    +         +   + +   +  +  R+
Sbjct: 86  RERDEAEALLAQIDAAQARVQALSAQLVAARARSQRLGLAARSGASAELDAIVAQQ--RV 143

Query: 172 RSIYLNRLDLENKSSLLRALLSSH 195
           + +   R + E +   L+  L  H
Sbjct: 144 QELQSQRREAEAELVALKKQLGEH 167


>gi|256423922|ref|YP_003124575.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
 gi|256038830|gb|ACU62374.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
          Length = 419

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 71/224 (31%), Gaps = 30/224 (13%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ-- 268
           V +  L   E        E+  N     N    +  +Y +A  +  + L ++        
Sbjct: 79  VKKGQLLA-ELDKVLLQAEVDRNRGALANAQSQL--IYQQAQYKRQDQLYKVGAISRADY 135

Query: 269 ---------NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---Q 316
                     Q +     + L   E+      I SPI G ++  +S S       S    
Sbjct: 136 DNATYLNKAAQASVESAGASLRTAERNLFFTEIYSPIDGVVLN-RSVSVGQTVAASFNTP 194

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L  +        ++A V    I +V+     +     Y D    +F   +++I      
Sbjct: 195 TLFVLAKDITKMQVQASVDEADIGNVQDSQRVSFTVDAYLDE---EFAGKVQEI------ 245

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               L+      V+   T ++ S+ +++L+ G  A V       
Sbjct: 246 ---RLRPSVSANVVTYTTMISASNESMKLKPGMTATVTIYTSEK 286



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 47/126 (37%), Gaps = 18/126 (14%)

Query: 18  KRMTLLSIIGIIGLITWSILLP-----------------IEISVSSSGEILNEDNVVEIK 60
           +++ +  I+ +  L  W                      I  SV+++G +   D V  + 
Sbjct: 3   RKIVITIIVLVAALAIWYFFFRKKENQVVISTQKPRYGHISTSVTATGTVQPVDTV-AVG 61

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +  SGIIK    +    + +G  L   + +     +D  + ++ N +  +  +++     
Sbjct: 62  TQVSGIIKYIYTDFNQPVKKGQLLAELDKVLLQAEVDRNRGALANAQSQLIYQQAQYKRQ 121

Query: 121 NNKYDV 126
           +  Y V
Sbjct: 122 DQLYKV 127


>gi|261365566|ref|ZP_05978449.1| macrolide-specific efflux protein MacA [Neisseria mucosa ATCC
           25996]
 gi|288565999|gb|EFC87559.1| macrolide-specific efflux protein MacA [Neisseria mucosa ATCC
           25996]
          Length = 393

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 16/141 (11%)

Query: 18  KRMTLLSIIGIIGLITWSILLP---------------IEISVSSSGEILNEDNVVEIKSP 62
           K    +++  ++G   WS   P               I  +VS++GEI    N+V + + 
Sbjct: 7   KWTVGITVAAVLGFAAWSYFQPEPQTSYITETVKRGDISQTVSATGEISPS-NLVSVGAQ 65

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG IKK  V+ G Q+ +G  +         + ++ +K  ++  +  + +   AL+    
Sbjct: 66  ASGQIKKLYVKLGQQVKKGDLIAEINSTTQVNTLNTEKSKLETYQAKLVSAGIALNSAEK 125

Query: 123 KYDVLEKAFESREEQLLDFLG 143
           KY      ++       D   
Sbjct: 126 KYKREAALWKENATSKEDLES 146



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 84/260 (32%), Gaps = 25/260 (9%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+          S+ +  Q + +
Sbjct: 61  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQVNTLNTE------KSKLETYQAKLV 114

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                L   E  ++++  L   N    E      + L     ++ + +         +  
Sbjct: 115 SAGIALNSAEKKYKREAALWKENATSKEDLESAQDALAAAKANVAELKAAIKQTKISINT 174

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            E       I++ + GT+V             Q +  ++++  +      + ++    I 
Sbjct: 175 AESELGYTRIVATMDGTVVAIPVEEGQTVNAVQSTPTIIQLA-NLDTMLNKMQIAEGDIT 233

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--------YYEVILK 392
            VK G    + F   ++      KA ++ +DP ++       T          YY     
Sbjct: 234 KVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSLGSYTTSTDTTSNAIYYYARAL 290

Query: 393 ITDLAFSDNNIELRNGFPAE 412
           + +    D  + +  G   +
Sbjct: 291 VPNP---DGKLSI--GMTTQ 305


>gi|149378241|ref|ZP_01895954.1| Secretion protein HlyD [Marinobacter algicola DG893]
 gi|149357468|gb|EDM45977.1| Secretion protein HlyD [Marinobacter algicola DG893]
          Length = 366

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 64/212 (30%), Gaps = 24/212 (11%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
           I+ +    + E     +     + E   +   +            ++ +  F    +++ 
Sbjct: 97  ILIRLDAAIDEAALRTRRAEAQLAEQEFKRVSDLLPKRAVSQSQYDEAKANFDAARARVN 156

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
             E    +K I +P  G  +  +      Y     P+++I       Y+   ++ K +  
Sbjct: 157 EAEAQLSKKIIRAPFDGK-LGLRLVDQGEYIGTGTPIVEIN-MLDPIYVDYTLSEKDLPM 214

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           V++GY          D     F   +  I+  ++ Q           V ++ T     + 
Sbjct: 215 VQQGYDVVATVAAIPDSH---FAGQVSAINTSVNPQTRT--------VRVRAT---LGNE 260

Query: 402 NIELRNGFPAEV--------LFTAKNTTLAQE 425
           + +LR G  A V               T    
Sbjct: 261 DNQLRPGMFATVSTRQPQDREVVTVPRTAVSY 292



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/96 (12%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNK 123
           G+++    E+G  + +G  L+  +       ID   +  +     + + E   +  L  K
Sbjct: 79  GVVENIAFESGDTVKKGDILIRLD-----AAIDEAALRTRRAEAQLAEQEFKRVSDLLPK 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             V +  ++  +        + +   +++    I +
Sbjct: 134 RAVSQSQYDEAKANFDAARARVNEAEAQLSKKIIRA 169


>gi|324328462|gb|ADY23722.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 217

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 57  KLTDWKAEVGKNYNEN-----DKLGAVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 110

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 111 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LSGKVEQVGL 166

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 167 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 216


>gi|262198998|ref|YP_003270207.1| hypothetical protein Hoch_5838 [Haliangium ochraceum DSM 14365]
 gi|262082345|gb|ACY18314.1| hypothetical protein Hoch_5838 [Haliangium ochraceum DSM 14365]
          Length = 636

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 70/223 (31%), Gaps = 18/223 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           ++ R  P  +     L +   +  + ++ L  +    S    +          S   G I
Sbjct: 349 DVLRISPGWVGWTFWLLLFACVSALLYAALGTVSEYSSGPALVRMNGRTELTASR-PGTI 407

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV- 126
           ++  V  G ++  G  L+   DI+           ++  R + D E    + L    D+ 
Sbjct: 408 EEIYVVPGQRVRAGQVLVRLHDIDAL---------VEYQRINDDFEAQLRNLLRTPSDLG 458

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L +A      Q    L        +  + G  S  R           + L+ +D E+  +
Sbjct: 459 LRQAVAGLRAQREQALALLEERRIRAPHAGTVSDVRIRPGLALATGELLLSLIDDESDLT 518

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++  L           + L       + +L+  +       LE
Sbjct: 519 VVALLPG-------GDRPLLAPGMTLRLELSGYQYAYQDLHLE 554



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 59/201 (29%), Gaps = 16/201 (7%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           + L     + D+   +  N L+    DL   ++  A   ++        E++ I +P AG
Sbjct: 431 DALVEYQRINDDFEAQLRNLLR-TPSDLG-LRQAVAGLRAQREQALALLEERRIRAPHAG 488

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T+   +           + L+ ++       + A +       +  G T  +    Y   
Sbjct: 489 TVSDVRIR-PGLALATGELLLSLIDDESDLTVVALLPGGDRPLLAPGMTLRLELSGYQYA 547

Query: 359 RE------------KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            +               +A +  + P  +   +           L  T     D      
Sbjct: 548 YQDLHLETVADEVIGPTEA-VRYLGPQAADALSITGPVVLVGARLPSTTFTTDDGVFNYH 606

Query: 407 NGFPAEVLFTAKNTTLAQEII 427
           +G         ++ T+ + + 
Sbjct: 607 DGMQGIAEVRVRDRTILEHLF 627


>gi|209549302|ref|YP_002281219.1| efflux transporter RND family, MFP subunit [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209535058|gb|ACI54993.1| efflux transporter, RND family, MFP subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 430

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 80/225 (35%), Gaps = 18/225 (8%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD-EANLEFAN 257
           L     L      S+  LN  +  V K+  +L       + +   +      + +L+ A 
Sbjct: 122 LLDTNKLEADVKSSRAKLNSAKANVAKANADLESASTSLERLKSLVKSNVSTQQSLDDAT 181

Query: 258 YLKEISRDLEQ-NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS- 315
           Y  + +   +Q N+       + L + E    +  I+SPI G I+             S 
Sbjct: 182 YKYDSAVAAKQINEAEVLASEADLQLAEVNLAKAKIVSPIDGVILTRAVN-PGATVAASL 240

Query: 316 -QPLM-KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             P++  I    K   ++  V    +  +  G  A      Y D       A IE+I   
Sbjct: 241 SAPILFTIAGDLKKMELQVDVDEADVGQIAVGQKAKFTVDAYPDRSFP---AEIEQI-RF 296

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            S+  NN+ T   Y+ +L +      + ++ LR G  A    T +
Sbjct: 297 ASEVVNNVVT---YKAVLSVD-----NADLLLRPGMTATADVTVE 333



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 83/234 (35%), Gaps = 11/234 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + V+++G +   + V +I S  SG ++   V+  S I  G  L   +  +   
Sbjct: 72  AKRGDLTVLVTATGSVQPTEQV-DISSELSGTVRDVNVDYNSTIKAGDVLALLDTNKLEA 130

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE---KAFESREEQLLDFLGKYHSTCSK 151
            +   +  + + + ++    + L+  +   + L+   K+  S ++ L D   KY S  + 
Sbjct: 131 DVKSSRAKLNSAKANVAKANADLESASTSLERLKSLVKSNVSTQQSLDDATYKYDSAVAA 190

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                   +     ++L  +       +   +   L RA+        ++   +      
Sbjct: 191 KQINEAEVLASEADLQLAEVNLAKAKIVSPIDGVILTRAVNPGATVAASLSAPIL---FT 247

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLKEI 262
              DL + E  V     ++   I   +     ++   D    A +E   +  E+
Sbjct: 248 IAGDLKKMELQVDVDEADV-GQIAVGQKAKFTVDAYPDRSFPAEIEQIRFASEV 300


>gi|327543442|gb|EGF29864.1| RND family efflux transporter MFP subunit [Rhodopirellula baltica
           WH47]
          Length = 406

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 77/227 (33%), Gaps = 23/227 (10%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+    ++       ++  DL + E    +S   L     ++ N LR  N        E 
Sbjct: 97  QQYEIALEKATAAYRLAAADLVRLEAQSQQSQRNL-----DRANQLRSTNS--QSVYDEI 149

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
               +  +  L   Q    +  +++   +   E  +I SPI G ++  ++     Y    
Sbjct: 150 VTAHEMATAMLAVGQAKLEEAEAEVHHAKVNLENTSIRSPIDGIVIDRRAN-LGQYVSVG 208

Query: 316 QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFKAIIEKIDPI 373
            P + ++        IRA V+   I  V++G         +   +     K I+     +
Sbjct: 209 HPGLFLLAKDLDQMQIRASVSESDIGKVQRGQPVMFTVDAHRDQVMTGHVKEIL-----L 263

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            ++   N  T   Y+VI+ I        ++ L      +V F     
Sbjct: 264 NARMHGNFVT---YDVIVAID-----QTDLNLLPHMTTDVEFEITKR 302



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 75/205 (36%), Gaps = 28/205 (13%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIK-KFQVEN-------GSQILQGTPLLTFEDIE 91
           + I+V ++G I  ++ V         I++      +       GS++ +GT L   +  +
Sbjct: 39  LVITVGTTGTIEPDEVVQVGPDVAGKIVRFGIDSRDPNKPIGVGSRVTKGTVLFQLDTQQ 98

Query: 92  TTDLID-------LKKVSIKNLRCHIDTEKSALDFLNNK--------YDVLEKAFESREE 136
               ++       L    +  L       +  LD  N          YD +  A E    
Sbjct: 99  YEIALEKATAAYRLAAADLVRLEAQSQQSQRNLDRANQLRSTNSQSVYDEIVTAHEMATA 158

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            L     K     ++V +  ++    S++  +  +  +   R +L    S+    L    
Sbjct: 159 MLAVGQAKLEEAEAEVHHAKVNLENTSIRSPIDGI--VIDRRANLGQYVSVGHPGLFLLA 216

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQER 221
           KDL  M+    + +VS++D+ + +R
Sbjct: 217 KDLDQMQI---RASVSESDIGKVQR 238


>gi|312887065|ref|ZP_07746669.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
 gi|311300377|gb|EFQ77442.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
          Length = 424

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 78/227 (34%), Gaps = 23/227 (10%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHE---QKNMLRHINELYDEANLEFANYLKE 261
            +K   +++ D +  +  + +    L+  + +    +N     N+L+    +  A+Y   
Sbjct: 82  VKKGELLAELDKSLLQATLDQFNGNLQSAMSQRLYAENNFSRQNQLFKADAISKADYDIA 141

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPL 318
           ++  L   +   A   +++   +K      I SPI G ++             S     L
Sbjct: 142 LNT-LNAAKAAVASVAAQVRSAKKNLSYTDIYSPIDGVVLNRNIN-IGQTVAASFSTPTL 199

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             I        + A V    I  VK G  A      +      KF   ++ I        
Sbjct: 200 FVIAKDITKMEVDANVDEADIGEVKAGERAIFTVDAF---INDKFIGTVKDI-------- 248

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK--NTTLA 423
             L+      V+   T +   +++++L+ G  A ++   K    TL 
Sbjct: 249 -RLRPSVSANVVTYTTIINAPNDDMKLKPGMTANIVIYTKEVEHTLL 294



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G+I   D V  + S  SGIIK   V+  S++ +G  L   +       +D  
Sbjct: 45  IAQSVTATGKIEPVDTV-TVGSQVSGIIKYLYVDFNSKVKKGELLAELDKSLLQATLDQF 103

Query: 100 KVSIK-NLRCHIDTEKS-ALDFLNNKYDVLEKA 130
             +++  +   +  E + +      K D + KA
Sbjct: 104 NGNLQSAMSQRLYAENNFSRQNQLFKADAISKA 136


>gi|268591061|ref|ZP_06125282.1| macrolide efflux protein MacA [Providencia rettgeri DSM 1131]
 gi|291313867|gb|EFE54320.1| macrolide efflux protein MacA [Providencia rettgeri DSM 1131]
          Length = 393

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 95/254 (37%), Gaps = 20/254 (7%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++R +Y+ + D   K  LL  +  + Q+  + +KN   + + +Q      E  + +    
Sbjct: 83  QIRKLYVKQGDKVVKGELLAEIDPTIQQ--SELKNATARLSSAQAQKRAAEATLIQYIKA 140

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            R  +  Q++    I   Y++A  ++   L++++     N+         +   +     
Sbjct: 141 YRRQVVMQRDG-SGIRSEYEQAQAQYEAQLQQVNV----NEALITQSEMDVQTAQANLNF 195

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
             I++PI+G ++     +       SQ  P + ++ +     ++ +++   IQ +  G  
Sbjct: 196 TRIIAPISGEVLGI-VANEGQTIVSSQTAPTILVLANLDKMQVQTRISEADIQKIHPGQP 254

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNN 402
            T       +   +     ++ I P    + NN    +     YY    ++ +   +   
Sbjct: 255 LTFYVIADPETHYESTMGYVQPIPPEALDESNNNSGGQQNSAIYYNGTFEVDNADRA--- 311

Query: 403 IELRNGFPAEVLFT 416
             L+    A+V   
Sbjct: 312 --LKTSMTAQVFIR 323



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 49/142 (34%), Gaps = 3/142 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE  V  +G +     V  + +  +G I+K  V+ G ++++G  L   +       +   
Sbjct: 58  IEKVVMVTGTLKPSMQV-NVGAQVNGQIRKLYVKQGDKVVKGELLAEIDPTIQQSELKNA 116

Query: 100 KVSIKNLRCHIDTEKSALDF--LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              + + +      ++ L       +  V+ +   S      +     +    +  N   
Sbjct: 117 TARLSSAQAQKRAAEATLIQYIKAYRRQVVMQRDGSGIRSEYEQAQAQYEAQLQQVNVNE 176

Query: 158 SSVYRSLKMKLTRMRSIYLNRL 179
           + + +S     T   ++   R+
Sbjct: 177 ALITQSEMDVQTAQANLNFTRI 198


>gi|220905325|ref|YP_002480637.1| hypothetical protein Ddes_2063 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869624|gb|ACL49959.1| hypothetical protein Ddes_2063 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 314

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 86/262 (32%), Gaps = 35/262 (13%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           ++   +  L R          L+++   L   L+         + L      S+      
Sbjct: 86  LHEDAERALQREVMQGPGTESLKSQVLDLERKLAETIAQRNKARQLAASGLGSR------ 139

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                +++  L E++   +  +        +A   FA  LKE+S    Q  R        
Sbjct: 140 -----QASGRLEEDVTSLQRRIELTTTTIKKAENSFAIRLKELSSYFGQEIREGEILPET 194

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKI-VPHSKLTYIRAKVTPK 337
           L          T+ SPI G ++   +  +     Q     M I V       I+  V   
Sbjct: 195 L----------TLTSPIKGYVLSLDATLNPGTLLQAGS--MPIRVGQLDPVLIQVPVYEA 242

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           +I  + +G    V  P   +   K F   + +I  + +     +    YY V + +    
Sbjct: 243 EISGISEGDKVDVEIPSLGN---KVFPGKVNEISWVSNDMS--VSNPSYYTVEITVP--- 294

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             + ++EL+ GF A V F    
Sbjct: 295 --NPDLELKPGFKAVVRFGGGR 314


>gi|193216404|ref|YP_001997603.1| RND family efflux transporter MFP subunit [Chloroherpeton
           thalassium ATCC 35110]
 gi|193089881|gb|ACF15156.1| efflux transporter, RND family, MFP subunit [Chloroherpeton
           thalassium ATCC 35110]
          Length = 369

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 79/223 (35%), Gaps = 28/223 (12%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY------LKEISRDLEQN 269
           +N  + +V  S+ ++   + + +  +      ++ A   +  +           ++++  
Sbjct: 84  VNAGQLLVKISSNDIDAKLGQIEAQIAAATANFENAEKNYNRFEALYAKKAATEKEMDDV 143

Query: 270 QRTFADEMSKLTILEKTREQKT-------ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           +  +    ++    E+ + +         I +P  G +V ++     + A    P++ +V
Sbjct: 144 RLAYESAKAQKKAAEEMKNEVEELLHYVRITAPF-GGVVADKFVDEGDLATPGMPVV-VV 201

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE-KKFKAIIEKIDPIISQQDNNL 381
             +    + A V   +I  +  G    V  P  +  +E   + A I ++ P      +  
Sbjct: 202 ERASKLKVTASVPESEIGFLSVGMPVKVIMPANSVSKEDLAYDAKISQVVPSADAMSHQ- 260

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF-TAKNTTLA 423
                ++V +        + +  ++ G  A +     K  TL 
Sbjct: 261 -----FKVKVD-----MPNVDGSIKPGMFARIAISKTKQKTLL 293



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 31/87 (35%), Gaps = 4/87 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V+ G  +  G  L+     +    +   +  I     + +      +   N++
Sbjct: 71  GRITGVYVKEGDYVNAGQLLVKISSNDIDAKLGQIEAQIAAATANFE----NAEKNYNRF 126

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSK 151
           + L     + E+++ D    Y S  ++
Sbjct: 127 EALYAKKAATEKEMDDVRLAYESAKAQ 153


>gi|312889209|ref|ZP_07748765.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
 gi|311298314|gb|EFQ75427.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
          Length = 398

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 78/234 (33%), Gaps = 36/234 (15%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           ++ E   V +  L     I  +  ++++++    KN   ++   Y+    +         
Sbjct: 102 SVIEGQQVKRGQLLAM--IKNQDLIKIQQDYLAAKNNFTYVQAEYNR-QQQLREAGAGTG 158

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTI----------------LSPIAGTIVYNQSFS 307
           +  +  + T+  E+S++T  E    Q  I                LSPI GTI +  + +
Sbjct: 159 KSFQSAEATYHAELSRITAYESQLTQLGIAPHKIVNGNIVSQFPVLSPIGGTIGHITANT 218

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP-HYADIREKKFKAI 366
              + Q    +M++V  +   +    V  K + HVK G   + +       +       I
Sbjct: 219 -GAFVQPGTSIMEVV-DNSKIHCDLTVFEKDLMHVKVGQKVSFQLTNQENQLITGTINGI 276

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +         +N  +        + +  +  +     L  G     L +  + 
Sbjct: 277 NKSF-------ENESKG-------VTVHAVIKNKEQKNLIPGMYVTALISTGSR 316



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 50/120 (41%), Gaps = 2/120 (1%)

Query: 40  IEISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           ++  + ++G++ +   N  ++     GII    V  G Q+ +G  L   ++ +    I  
Sbjct: 70  LDSVIKANGQLAVPPQNKADVSILSGGIINHISVIEGQQVKRGQLLAMIKN-QDLIKIQQ 128

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             ++ KN   ++  E +    L        K+F+S E      L +  +  S++   GI+
Sbjct: 129 DYLAAKNNFTYVQAEYNRQQQLREAGAGTGKSFQSAEATYHAELSRITAYESQLTQLGIA 188


>gi|260427250|ref|ZP_05781229.1| macrolide-specific efflux protein MacA [Citreicella sp. SE45]
 gi|260421742|gb|EEX14993.1| macrolide-specific efflux protein MacA [Citreicella sp. SE45]
          Length = 397

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 81/232 (34%), Gaps = 17/232 (7%)

Query: 197 KDLTMMKNLFEKNAV--SQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANL 253
           + +  + +L ++NAV  ++ DL Q +  +  +  E+R            I  EL    +L
Sbjct: 86  ELIARIDSLEQQNAVQQAKADLAQLDAEIASNAAEIRLAEQALSRQQTLITRELVTTEDL 145

Query: 254 EFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           E A    +++  +    +   A    ++   E   E+  I +PI GT+V           
Sbjct: 146 ESAEATLDMAHANAASLEAQRARAEIEVATAELDLERTQITAPIDGTVVAV-VSDEGTTV 204

Query: 313 QQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFP---HYADIREKKFKAII 367
             S     IV  +      I+A+++   + +V  G    VRF        + E +  ++ 
Sbjct: 205 NNSSETPTIVKLAQLDRMEIKAEISEADVVNVAPGQ--LVRFSLLGAPDRVYEAELASVE 262

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                I    + +  +  YY     + +         LR G    V      
Sbjct: 263 PAPSSIRDSDEIDTDSAIYYNARFLVDNSDRL-----LRIGMSTNVTIILGR 309



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 17/157 (10%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V ++G I  E  +V + +  SG++++  V+ G+ + +G  +   + +E  + +   
Sbjct: 45  VESTVLATGLIEAES-LVSVGARTSGLVEELLVDVGNDVAKGELIARIDSLEQQNAVQQA 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +  L   I +  + +                R  +      +   T   V    + S
Sbjct: 104 KADLAQLDAEIASNAAEI----------------RLAEQALSRQQTLITRELVTTEDLES 147

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              +L M      S+   R   E + +     L   Q
Sbjct: 148 AEATLDMAHANAASLEAQRARAEIEVATAELDLERTQ 184


>gi|239996566|ref|ZP_04717090.1| putative efflux pump protein [Alteromonas macleodii ATCC 27126]
          Length = 357

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 108/347 (31%), Gaps = 85/347 (24%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R       R   L+++       + I+  I + ++    + +   V +I    +G I +
Sbjct: 3   QRTPDQEFARYIKLALVAFAICFIYFIIADIRMPMTPQARVYH--QVTQISPQINGPINE 60

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V+N   + +G  L   ++                    I  EK+ +D  N        
Sbjct: 61  VLVKNNQTVKEGQVLFVIDETPYL----------------IALEKAQIDLAN-------- 96

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                                ++ N  I +   +++ K+    ++Y  R           
Sbjct: 97  --------------------VELENAQIDAKAEAIRAKIEAASAVYDER----------- 125

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                   +   + +L +  AVSQ         V K+  +L+    E   +   +NE   
Sbjct: 126 ------NSEFQRLNSLVQTKAVSQQ-------NVDKAYAQLKSAEAEISALEADLNEQVV 172

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                          +       + + ++ +   E       I +P  G +   Q  +  
Sbjct: 173 ------------ARGEQGDKNLKYLEAVNAVKRAELNLAYTKIKAPHDGIMANMQV-TQG 219

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            YA+QS PL  +V       + A    K + +VK+G  A V F    
Sbjct: 220 TYAKQSTPLASVV--DNTLDVVADFREKSLANVKEGIRANVVFDALP 264


>gi|291483976|dbj|BAI85051.1| hypothetical protein BSNT_02397 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 377

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 68/159 (42%), Gaps = 6/159 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I  +V   G +   +          G ++  +V+ G ++ +GTPL+T+ + + +   + 
Sbjct: 46  EISSTVMVPGTLKFSNEQYVFYEADKGTLEDIKVKEGDKVKKGTPLVTYTNEQLSLEKEQ 105

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +++ ++ R  ID  +  L  L++K   LEK    +E +      K   +          
Sbjct: 106 NQLTSESNRLQIDQIQEKLKALDSKERELEKQVGKKEAE------KQIESERTELQMQKK 159

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +    LK    + +S+     DLE KS +   ++S +Q+
Sbjct: 160 TAEIELKQTELQRQSLANRVSDLEVKSEIEGTVISVNQE 198



 Score = 41.2 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 16/174 (9%)

Query: 229 ELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           +++E +    +  R + +     EA  +  +   E+    +  +        +   L   
Sbjct: 119 QIQEKLKALDSKERELEKQVGKKEAEKQIESERTELQMQKKTAEIELKQTELQRQSLANR 178

Query: 287 REQKTILSPIAGTI--VYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVK 343
                + S I GT+  V  ++ S  +  Q  +P++ I  P      +  K++      VK
Sbjct: 179 VSDLEVKSEIEGTVISVNQEAASKKSDIQ--EPVIHIGNPKD--LVVSGKLSEYDTLKVK 234

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY----YEVILKI 393
           KG   T+       I+ K +K  +  +  +  QQ++           Y + +KI
Sbjct: 235 KGQKVTL---TSDVIQGKTWKGTVSAVGLVPDQQESAAAQGTEQAVQYPLQVKI 285


>gi|320588084|gb|EFX00559.1| chromosome segregation protein [Grosmannia clavigera kw1407]
          Length = 1209

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 87/213 (40%), Gaps = 16/213 (7%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +  +     +  +   R  ++ E++ LD L+N+YD + K  +     +  F  +  S   
Sbjct: 718 QLEEGFGPSRTELSAKRAQLERERARLDTLSNRYDSINKNMDEYATSVESFEAEKKSDFK 777

Query: 151 KVFNY----GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS--HQKDLTMMKN 204
           K         + S+   ++    ++      R ++E++  +L   L      K+  +   
Sbjct: 778 KALTAAEGMQLESLNGEVQTLQRQLNEASSRRREIESQKQILEVDLRQNLRMKEDQLTSQ 837

Query: 205 LFEK--------NAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +F+         N V +Q +L + ++ + +   +LRE + +       INEL  +   E 
Sbjct: 838 VFDTMTSVGGDGNYVEAQKELKKLQKRLKEKETKLRETMDDIDGKTIQINELRVK-KGEL 896

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
               +EI+ +LE++Q+     + +  +L +   
Sbjct: 897 EQRQQEIAANLERSQKRMEKNLQRRALLTQQLA 929


>gi|325134997|gb|EGC57627.1| multidrug resistance protein A [Neisseria meningitidis M13399]
          Length = 384

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 103 NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 162

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 163 AVSQAQAAVKAALAEESSARAALGGDVSLRE-----------------QPAVQTAIGRLK 205

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 206 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 263

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 264 MKIGQPAEL 272



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 53/161 (32%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 54  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 113

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 114 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 173

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+     + L  + ++  A+       L + + 
Sbjct: 174 ALAEESSARAALGGDVSLREQPAVQTAIGRLKDAWLNLQRT 214


>gi|297621932|ref|YP_003710069.1| HlyD family secretion protein [Waddlia chondrophila WSU 86-1044]
 gi|297377233|gb|ADI39063.1| HlyD family secretion protein [Waddlia chondrophila WSU 86-1044]
          Length = 296

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 16/193 (8%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            +RE++   +  L+  + L  E  +   +Y                +  + +       +
Sbjct: 114 SIRESLAYAETQLKRRSPLVQEKTVSQEDYQNAYYNQKILT-ANLLEAAASMENSRIRLQ 172

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              ++ P  G +VY +           +P+   V  +   + R  ++   +  +  G  A
Sbjct: 173 DTRLVCPSDG-VVYTRIREPGTVLSIGEPV-YSVAVNTPIWARTYISEPDLGRIYPGMAA 230

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIIS-----QQDNNLQTQEYYEVILKITDLAFSDNNI 403
            V   +        ++  I  I PI        +  +L+T   Y++ + I +        
Sbjct: 231 EV---YTDTPENPVYEGRIGFISPIAEFTPKNVETPDLRTNLVYQLRVIIKNPDKG---- 283

Query: 404 ELRNGFPAEVLFT 416
            LR G P  V   
Sbjct: 284 -LRQGMPVTVKLK 295



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 50/155 (32%), Gaps = 4/155 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K    E G  + +G  L   +D          +    ++R  +   ++ L     +
Sbjct: 73  SGKLKTMLYEEGDVVHEGDLLAELDDAPYKQSFLESEAKFTSIRESLAYAETQLK----R 128

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              L +     +E   +         + +     S     ++++ TR+       +    
Sbjct: 129 RSPLVQEKTVSQEDYQNAYYNQKILTANLLEAAASMENSRIRLQDTRLVCPSDGVVYTRI 188

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +       +      + +   ++ +  +S+ DL +
Sbjct: 189 REPGTVLSIGEPVYSVAVNTPIWARTYISEPDLGR 223


>gi|89093353|ref|ZP_01166302.1| putative cation efflux system protein [Oceanospirillum sp. MED92]
 gi|89082332|gb|EAR61555.1| putative cation efflux system protein [Oceanospirillum sp. MED92]
          Length = 493

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 70/197 (35%), Gaps = 33/197 (16%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L +  E Y  A      YL+  S    ++         KL   +++  +  + +P +G 
Sbjct: 156 ELVNAQEEYLAALQSGNRYLRRASESKLKSLGADESIFEKLKSGKQSFNRLPVYAPQSGY 215

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +          + + +  LM+I P  +  +  A++  +Q   V  G  A +R      + 
Sbjct: 216 VSQLNVR-QGMFIKPASKLMRIGPL-QQIWATAELFERQAGQVSVGDQAEMRL---DFLP 270

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF---------- 409
            K ++  ++ I P + Q+   L      +V L+     F + +++L+             
Sbjct: 271 GKSWRGKVDYIYPALDQKTRTL------KVRLR-----FENPDLQLKPDMFARIEIETSA 319

Query: 410 -------PAEVLFTAKN 419
                  PA  L    +
Sbjct: 320 TKPVLNVPASALIKTGS 336


>gi|323144701|ref|ZP_08079283.1| efflux transporter, RND family, MFP subunit [Succinatimonas hippei
           YIT 12066]
 gi|322415518|gb|EFY06270.1| efflux transporter, RND family, MFP subunit [Succinatimonas hippei
           YIT 12066]
          Length = 396

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 74/230 (32%), Gaps = 30/230 (13%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHE----------QKNMLRHINELYDEANLEFANYLK 260
           + QNDL   +  +     ++R    E          Q  +L++      EA    A+Y  
Sbjct: 95  IQQNDLKTAKAQLKLLDAQIRSKQAEITKLKLENDRQAKLLKNAATSKQEAEAATASYKM 154

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
               DL+  +  +      ++  E       I +P+ GT+              +Q    
Sbjct: 155 -ALADLDALKAQYEQAEISVSDAETNLGYTKITAPMDGTVYAIPV-EEGQTVNANQTTPT 212

Query: 321 IVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           I+  +   +  +  +++   +  VK G   T       +   K    ++  IDP     +
Sbjct: 213 ILKLAKLDVMTVETEISEADVVKVKPGMDCTFTILGLPNREFKT---VLASIDPAPKSAE 269

Query: 379 NNLQTQE--------YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           N   +          YY   L I      +++  LR    AEV  T    
Sbjct: 270 NETSSSSSSSSTEAIYYNAQLDID-----NSDGLLRIDMTAEVNITIDEK 314



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 49/150 (32%), Gaps = 12/150 (8%)

Query: 35  SILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +    I+  V +SG +     +   + +  SG IKK  V  G  + +G  L   +     
Sbjct: 40  AATRDIKSRVFASGTL--AGKIEVDVGAQVSGQIKKLYVNTGDVVKKGDLLCEIDPEIQQ 97

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           + +   K  +K L   I ++++ +  L  + D   K  ++                ++  
Sbjct: 98  NDLKTAKAQLKLLDAQIRSKQAEITKLKLENDRQAKLLKN---------AATSKQEAEAA 148

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                     L     +     ++  D E 
Sbjct: 149 TASYKMALADLDALKAQYEQAEISVSDAET 178


>gi|321315193|ref|YP_004207480.1| putative efflux permease [Bacillus subtilis BSn5]
 gi|320021467|gb|ADV96453.1| putative efflux permease [Bacillus subtilis BSn5]
          Length = 377

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 68/159 (42%), Gaps = 6/159 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I  +V   G +   +          G ++  +V+ G ++ +GTPL+T+ + + +   + 
Sbjct: 46  EISSTVMVPGTLKFSNEQYVFYEADKGTLEDIKVKEGDKVKKGTPLVTYTNEQLSLEKEQ 105

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +++ ++ R  ID  +  L  L++K   LEK    +E +      K   +          
Sbjct: 106 NQLTSESNRLQIDQIQEKLKALDSKERELEKQVGKKEAE------KQIESERTELQMQKK 159

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +    LK    + +S+     DLE KS +   ++S +Q+
Sbjct: 160 TAEIELKQTELQRQSLANRVSDLEVKSEIEGTVISVNQE 198



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 16/174 (9%)

Query: 229 ELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           +++E +    +  R + +     EA  +  +   E+    +  +        +   L   
Sbjct: 119 QIQEKLKALDSKERELEKQVGKKEAEKQIESERTELQMQKKTAEIELKQTELQRQSLANR 178

Query: 287 REQKTILSPIAGTI--VYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVK 343
                + S I GT+  V  ++ S  +  Q  +P++ I  P      +  K++      VK
Sbjct: 179 VSDLEVKSEIEGTVISVNQEAASKKSDIQ--EPVIHIGNPKD--LVVSGKLSEYDTLKVK 234

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY----YEVILKI 393
           KG   T+       I+ K +K  +  +  +  QQ++           Y + +KI
Sbjct: 235 KGQKVTL---TSDVIQGKTWKGTVSAVGLVPDQQESAAAQGTEQAVQYPLQVKI 285


>gi|78066359|ref|YP_369128.1| HlyD family secretion protein [Burkholderia sp. 383]
 gi|77967104|gb|ABB08484.1| Secretion protein HlyD family [Burkholderia sp. 383]
          Length = 459

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 93/281 (33%), Gaps = 14/281 (4%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           + ++ +  L+       S         +++    L   + ++R +Y N   L N     R
Sbjct: 119 SIDADDGNLVRAGTPLVSLDPSDAQIALATAQADLAATVRKVRGLYSNERGLANSIDGAR 178

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L + +  L       + +   + DL +   I  +     R+ +   ++          
Sbjct: 179 AELDTRRTALDK----AKADYSRREDLGRSGAISREELAHARDTLTSAQSAYAAAQSALA 234

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
             + +       I      +         +L        +  +++P+ G +   ++    
Sbjct: 235 TLSEQHQTSKALIDDTAVASHPDVQAAAERLRAAYLAHARTQVVTPVTGYVAK-RTVQVG 293

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD--IREKKFKAI- 366
                  PL+ +VP  +  ++ A  T KQ++H++ G    +    Y D      + +++ 
Sbjct: 294 QRVSPGVPLLAVVPL-RELWVDANFTEKQLEHMRIGQPVELTADLYGDAVRYTGRVQSLG 352

Query: 367 IEKIDPIISQQDNNLQTQ-----EYYEVILKITDLAFSDNN 402
           +            N         +   V +++TD A  D +
Sbjct: 353 VGTGSAFSLLPAQNATGNWIKIVQRLPVRIELTDPAQLDAH 393


>gi|154248146|ref|YP_001419104.1| RND family efflux transporter MFP subunit [Xanthobacter
           autotrophicus Py2]
 gi|154162231|gb|ABS69447.1| efflux transporter, RND family, MFP subunit [Xanthobacter
           autotrophicus Py2]
          Length = 426

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 51/140 (36%), Gaps = 2/140 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  +V ++G +      V I S  +G +K+  VE G  + QG PL++ +  E    + 
Sbjct: 66  AELVRTVVATGHVETP-YRVSIGSQITGTVKEVLVEEGQSVRQGQPLVSLDATELESAVV 124

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++      +   +       ++     +A         D   K   + +      +
Sbjct: 125 QAEGAVAQADARMRQLRELTKPAADEAQKQARANLDNARAAFDRADKLAKSGAGT-QATL 183

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
               R+L + LT  R+  L 
Sbjct: 184 DEATRALNVALTLARTAELQ 203



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 89/293 (30%), Gaps = 36/293 (12%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI-YLNRLDLENKSSL 187
           K     E Q +       S  +      +     ++     RMR +  L +   +     
Sbjct: 95  KEVLVEEGQSVRQGQPLVSLDATELESAVVQAEGAVAQADARMRQLRELTKPAADEAQKQ 154

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            RA L + +        L +  A +Q  L++  R +  +              L    EL
Sbjct: 155 ARANLDNARAAFDRADKLAKSGAGTQATLDEATRALNVAL------------TLARTAEL 202

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
               +    +        L Q +   A   ++L          TI +P  G ++  +S  
Sbjct: 203 QVYTSSPGGSDYVIAETQLSQAKANLATARARLGYA-------TITAPRDG-VLITRSVE 254

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q  + L+ + P      +  ++  K +  +K G +A      Y D R     A +
Sbjct: 255 RGAVVQAGKTLLVLAPAGDTQLV-VQIDEKNLSLLKLGQSALASADAYPDQRFP---ASL 310

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             I+P +     ++      EV L + +       + LR      V       
Sbjct: 311 TYINPSVDITRASV------EVKLTVPEP-----PVYLRQDMTVSVDIAVDRR 352


>gi|149278013|ref|ZP_01884152.1| putative multidrug resistance protein [Pedobacter sp. BAL39]
 gi|149231211|gb|EDM36591.1| putative multidrug resistance protein [Pedobacter sp. BAL39]
          Length = 354

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/365 (13%), Positives = 107/365 (29%), Gaps = 81/365 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK        ++ +G  L+  ++ + T   D    S+ N        ++ +  LN+  
Sbjct: 63  GYIKTVNFIENQEVKKGDTLVVIDNSDYTVQQDEANASVLNA-------EAQIAVLNSNV 115

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E A      ++     K     ++   Y                             
Sbjct: 116 HTAETAASGSRARIAAAKAKLWKQEAEYARYKK--------------------------- 148

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              L  L S+ ++ L  +++L E   V+Q D N  +     +                  
Sbjct: 149 ---LFDLESATRQQLETVQSLLE---VAQADYNAAKEDYSAAM----------------- 185

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                       +  ++I+   +  +       + L   +       + +P  G +   +
Sbjct: 186 ------------SRAQDIAVQSQVLRSEVTRRRAVLKRNDLNTSYTVVTAPYDGKM-GRR 232

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +       Q  Q +  IV  S   ++ A     QI  +  G    V    + D     FK
Sbjct: 233 TIQPGQVLQTGQTIAYIVDRSAGKWVVANFKETQIGKMSVGEDVEVEVDAFPDEH---FK 289

Query: 365 AIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNNIELR-NGFPAEVLFT 416
             IE +      +      +  T  + ++  +I     +    + ++L   G  A V   
Sbjct: 290 GKIESLSAATGSRFSLLPPDNATGNFVKIAQRIPVRIRITGDPDQVKLLNAGMSASVQVR 349

Query: 417 AKNTT 421
            ++ +
Sbjct: 350 KRSHS 354


>gi|269792994|ref|YP_003317898.1| efflux transporter, RND family, MFP subunit [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100629|gb|ACZ19616.1| efflux transporter, RND family, MFP subunit [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 380

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 76/223 (34%), Gaps = 32/223 (14%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--------- 253
           + + +   ++  D + QE  V  S+ ++       +     + E   E            
Sbjct: 88  ERVRKGQLLAVIDYDAQEAQVRASSAQVESARASLQQARASLEEARREMERYRRLFEQGY 147

Query: 254 -------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                  + +  L +      Q +       + L+     R    I SP+ GT++ +   
Sbjct: 148 ATRQEMDKRSTALSQAEASYRQAEANLGSASASLSAQRVNRRDYQITSPVDGTVLDDYGI 207

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +    A  S PL + V + ++      +   +++ +K+G  ATV      D+    F+  
Sbjct: 208 APGTMAGPSTPLFR-VANVRILKATVNLPETELKDLKEGMAATVTCEALGDVT---FRGT 263

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           ++ I P +      ++ Q             + +N   L+ G 
Sbjct: 264 LKTIYPYVDTSTRTVKAQ------------VWMENPGNLKPGM 294



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/118 (11%), Positives = 39/118 (33%), Gaps = 2/118 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +     G ++ +G  L   +       +      +++ R  +   +++L+    + 
Sbjct: 77  GRVTRVTARPGERVRKGQLLAVIDYDAQEAQVRASSAQVESARASLQQARASLEEARREM 136

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +   + FE       +   +  ST              +L      + +  +NR D +
Sbjct: 137 ERYRRLFEQGYATRQEMDKR--STALSQAEASYRQAEANLGSASASLSAQRVNRRDYQ 192


>gi|237716248|ref|ZP_04546729.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262407853|ref|ZP_06084401.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294643932|ref|ZP_06721719.1| efflux transporter, RND family, MFP subunit [Bacteroides ovatus SD
           CC 2a]
 gi|294807673|ref|ZP_06766466.1| efflux transporter, RND family, MFP subunit [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229443895|gb|EEO49686.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262354661|gb|EEZ03753.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292640704|gb|EFF58935.1| efflux transporter, RND family, MFP subunit [Bacteroides ovatus SD
           CC 2a]
 gi|294445109|gb|EFG13783.1| efflux transporter, RND family, MFP subunit [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 406

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 72/215 (33%), Gaps = 17/215 (7%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDL 266
             +++ D    +  +            E +   ++        E +L      ++   + 
Sbjct: 86  QLIAEMDRVTLQSELASQQATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ + ++    + L   E+     TI SPI G ++  +   +            L  I  
Sbjct: 146 QKAKSSYDSSKASLAKAERNLSYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNN 380
                 + A V    I  + +G  A+     Y +     F+ I+ +I   D   +   N+
Sbjct: 205 DLTQMQVVADVDEADIGGIIEGQRASFTVDAYPND---VFEGIVTQIRLGDASSTSSTNS 261

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             T   YEV++        + +++L+    A V  
Sbjct: 262 TSTVVTYEVVISAP-----NPDLKLKPRLTANVTI 291



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 68/186 (36%), Gaps = 4/186 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII K  V+  S + +G  +   + +     +  +
Sbjct: 45  ISNSVTATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSVVTKGQLIAEMDRVTLQSELASQ 103

Query: 100 KVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + +    +   + +K   +    L+ K  + +  FE            Y S+ + +    
Sbjct: 104 QATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNYQKAKSSYDSSKASLAKAE 163

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +  Y ++   +  +             S      L +   DLT M+ + + +      +
Sbjct: 164 RNLSYATITSPIDGVVISRDVEAGQTVASGFETPTLFTIAADLTQMQVVADVDEADIGGI 223

Query: 217 NQQERI 222
            + +R 
Sbjct: 224 IEGQRA 229


>gi|65321937|ref|ZP_00394896.1| COG1566: Multidrug resistance efflux pump [Bacillus anthracis str.
           A2012]
 gi|228935876|ref|ZP_04098686.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948294|ref|ZP_04110577.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229124135|ref|ZP_04253327.1| multidrug resistance protein A [Bacillus cereus 95/8201]
 gi|229158172|ref|ZP_04286239.1| multidrug resistance protein A [Bacillus cereus ATCC 4342]
 gi|228625130|gb|EEK81890.1| multidrug resistance protein A [Bacillus cereus ATCC 4342]
 gi|228659437|gb|EEL15085.1| multidrug resistance protein A [Bacillus cereus 95/8201]
 gi|228811281|gb|EEM57619.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228823644|gb|EEM69466.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 225

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 65  KLTDWKAEVGKNYNEN-----DKLGAVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 118

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 119 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LTGKVEQVGL 174

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 175 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 224


>gi|53804109|ref|YP_114248.1| hypothetical protein MCA1810 [Methylococcus capsulatus str. Bath]
 gi|53757870|gb|AAU92161.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 326

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/137 (11%), Positives = 56/137 (40%), Gaps = 2/137 (1%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P    ++ +G +      + I +P  G++K  +V+ G ++  G  L   +D E    +++
Sbjct: 42  PFASYIAGAGIVEARSRNIGIGTPLPGLVKSVEVKVGDRVEAGAVLFRLDDREPLAELEI 101

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           ++  +   +  +   +++L   N    + +   + R     D   + ++    +    + 
Sbjct: 102 RRADLLKAQAGVAEAEASLTDANTLLALADAVTDERAISAEDIKRRRNAVL--IAKARLE 159

Query: 159 SVYRSLKMKLTRMRSIY 175
           + +  ++    ++ ++ 
Sbjct: 160 TAHAQVRQAEAQLAAVQ 176



 Score = 43.1 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 38/110 (34%), Gaps = 3/110 (2%)

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL--RENIHEQKNMLRHINELYDEANLEF 255
            L   + L E   + + DL + +  V ++   L     +    + +     +  E     
Sbjct: 89  RLDDREPLAELE-IRRADLLKAQAGVAEAEASLTDANTLLALADAVTDERAISAEDIKRR 147

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            N +      LE          ++L  ++ T ++  + +PI G ++    
Sbjct: 148 RNAVLIAKARLETAHAQVRQAEAQLAAVQTTLDRMVVRAPIRGEVLQVNV 197


>gi|268591918|ref|ZP_06126139.1| secretion protein, HlyD family [Providencia rettgeri DSM 1131]
 gi|291312305|gb|EFE52758.1| secretion protein, HlyD family [Providencia rettgeri DSM 1131]
          Length = 346

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 67/170 (39%), Gaps = 2/170 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           + E N + I S   G I +F V+   ++ +G  L T +       ++  K  +      +
Sbjct: 42  VIEANKINISSVVPGRISQFYVKENQEVKKGDRLFTIDPTMYALRVNQAKAELLVAEAAL 101

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             +K  +    +  +V E+  +  +  L             +    +++  + +    T 
Sbjct: 102 SNKKRIIVAETSNSEVAEEQIKRAQVNLALATQSLKRLEPLLAKGFVTA--QQVDDTRTL 159

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            R   ++    + ++    AL+++ + +  ++++L    A+++ +L   E
Sbjct: 160 KRDAEVSLKQAQKQNVASEALINNTKSEEALVESLKISLAMAEWELGNTE 209



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 73/229 (31%), Gaps = 21/229 (9%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           +++ V E     + ++L       ++         +     +L  K   + +   N    
Sbjct: 59  SQFYVKENQEVKKGDRLFTIDPTMYALRVNQAKAELLVAEAALSNKKRIIVAETSNSEVA 118

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E +    +  L+   + L  ++ L  K  V+   ++    +   + + L++   +     
Sbjct: 119 EEQIKRAQVNLALATQSLKRLEPLLAKGFVTAQQVDDTRTLKRDAEVSLKQAQKQNVASE 178

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             IN    E  L                          L + E       I +P  G IV
Sbjct: 179 ALINNTKSEEAL-------------------VESLKISLAMAEWELGNTEIKAPSDGYIV 219

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
                S+  +    Q +  ++  ++  ++ A     ++ +++ G  A V
Sbjct: 220 GLTI-SAGEFVLSGQSVFTLI-DTETWFVSAYFKETELDNIQMGSCAVV 266


>gi|86159831|ref|YP_466616.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776342|gb|ABC83179.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 443

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/197 (9%), Positives = 59/197 (29%), Gaps = 9/197 (4%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+   V +SG ++    +  + +  +G +   +V+ G  +  G  L+  +D E    +  
Sbjct: 76  PLVQRVVASGRVMAPARIQ-VGAVATGKVAAVRVDEGDAVRAGDLLVRLDDAEARAALSQ 134

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  +      ++  +        +          R+ +L   L +     ++      S
Sbjct: 135 ARAQVLQAAARLEQSRGPAARGATEA--------LRQAELRVELAERARERARSLADAGS 186

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +    L      +      R     +++         +     +        V++  L  
Sbjct: 187 ASVAQLDDAEQALALARSARESALAQAAAAAGAGPDQRLAEAALAAARGAEEVARARLED 246

Query: 219 QERIVYKSTLELRENIH 235
           ++     +   +   + 
Sbjct: 247 RQLRAPAAATVILREVE 263



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 77/282 (27%), Gaps = 39/282 (13%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D L +     ++       +       +L + R           + + LR  L+   ++ 
Sbjct: 118 DLLVRLDDAEARAALSQARAQVLQAAARLEQSRGPAARGATEALRQAELRVELAERARER 177

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++L +  + S   L+  E+ +                    +     E+ L  A   
Sbjct: 178 A--RSLADAGSASVAQLDDAEQALA-------------------LARSARESALAQAAAA 216

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                D    +   A       +     E + + +P A T++  +     +       L+
Sbjct: 217 AGAGPDQRLAEAALAAARGAEEVARARLEDRQLRAPAAATVI-LREVEPGDTVTAGARLL 275

Query: 320 KIVPHSKL-TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            +    +    +      K +  ++ G  A      + D     F+A +  + P +    
Sbjct: 276 VLARAGETRLSVEP--DEKNLALLRVGQPARAVADAFPDA---PFEATVSFLAPSVDPAR 330

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +      EV L +           LR      V       
Sbjct: 331 GTV------EVRLAVPAPPPF-----LRPDMTVSVNVEVGRK 361


>gi|289548310|ref|YP_003473298.1| efflux transporter RND family, MFP subunit [Thermocrinis albus DSM
           14484]
 gi|289181927|gb|ADC89171.1| efflux transporter, RND family, MFP subunit [Thermocrinis albus DSM
           14484]
          Length = 372

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 91/254 (35%), Gaps = 13/254 (5%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            ++  V +SG +  ED +  IKS  SG ++K  V  G ++ +G  +      +     + 
Sbjct: 38  EVQKVVYASGYVEPEDYL-VIKSEVSGRVEKLLVREGDRVKKGQLMAVLSHEDLVAAEEE 96

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--SKVFNYG 156
               +K +   +  +   L  L ++ D      +  E +L             S+     
Sbjct: 97  LLQRLKLVEERLKEDSPYLTALKSRVDDARIQVDQTERELRRREELAAKGLIPSEQLEKY 156

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM------MKNLFEKNA 210
            ++  R++ +      S       L  + ++LR  L   ++D+        +  L  K  
Sbjct: 157 RTAYERAVHLLREAEASYRDTVESLRRERNILRYQLQRVREDIDKRFVRSPVDGLVLKRF 216

Query: 211 VSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           VS+    N L+Q  ++   S  +  + + E       + +   +  L    +  ++ + +
Sbjct: 217 VSEGSYVNHLSQDNKLFAVSGSQKNQVLLELDEDYAGLVKEGQKVLLTLDAFPGKVWQGV 276

Query: 267 EQNQRTFADEMSKL 280
                +  D   ++
Sbjct: 277 VYKVESLVDRSRRV 290



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 78/231 (33%), Gaps = 31/231 (13%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +        + + LK+   R++        L+++    R  +   +++L   + L  K  
Sbjct: 88  EDLVAAEEELLQRLKLVEERLKEDSPYLTALKSRVDDARIQVDQTERELRRREELAAKGL 147

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +    L +      ++   LRE     ++ +  +                         +
Sbjct: 148 IPSEQLEKYRTAYERAVHLLREAEASYRDTVESL-------------------------R 182

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
           R       +L  + +  +++ + SP+ G ++  +  S  +Y         +  V  S+  
Sbjct: 183 RERNILRYQLQRVREDIDKRFVRSPVDGLVLK-RFVSEGSYVNHLSQDNKLFAVSGSQKN 241

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +  ++       VK+G    +    +     K ++ ++ K++ ++ +   
Sbjct: 242 QVLLELDEDYAGLVKEGQKVLLTLDAFP---GKVWQGVVYKVESLVDRSRR 289


>gi|255038582|ref|YP_003089203.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
 gi|254951338|gb|ACT96038.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
          Length = 415

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/320 (12%), Positives = 95/320 (29%), Gaps = 88/320 (27%)

Query: 38  LPIEISVSSSGEILNEDNVVEIK--SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
              +  +  +G +     +  I+  +   G + +  +E G+ + QG  LL          
Sbjct: 56  GKFDEFIVVTGVVQP---LKTIQLDAIVGGYVTEKLIEGGNMVKQGDVLL---------- 102

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                         ++ +   L FL ++ +                              
Sbjct: 103 -------------RLENQNLKLSFLQSETEA----------------------------- 120

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                 R +       +++ + R  L+   S L   L   +        LF+   + + D
Sbjct: 121 -----SRLVNDLQNTRQNLKVARFTLQKTLSDLDFQLDQAKDAHDRNVKLFKDKVIPEAD 175

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR-DLEQNQRTFA 274
             + +R   K                        E  +E   Y +E ++  + Q + T A
Sbjct: 176 YLKTKRDYEKLV-------------------RQREIEIESQKYQEENAKMQITQLEGTLA 216

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
                + +  +T +   + +P++G +         +   Q Q + +I     L   + +V
Sbjct: 217 STQKNVGLWRQTLDNLVVKAPVSGLLSSMNV-EVGSNINQGQNIGQI---DDLNGFKMRV 272

Query: 335 TP--KQIQHVKKGYTATVRF 352
           +     I  +  G   ++ F
Sbjct: 273 SVDEHYISRIFVGLQGSMEF 292


>gi|327192139|gb|EGE59114.1| putative protein secretion protein, HylD family [Rhizobium etli
           CNPAF512]
          Length = 430

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 80/225 (35%), Gaps = 18/225 (8%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD-EANLEFAN 257
           L     L      S+  +N  +  V K+  +L       + +   +      + +L+ A 
Sbjct: 122 LLDTNKLEADVKSSRAKVNSAKANVAKANADLESASTSLERLKSLVRSNVSTQQSLDDAT 181

Query: 258 YLKEISRDLEQ-NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS- 315
           Y  + +   +Q N+       + L + E    +  I+SPI G I+             S 
Sbjct: 182 YKYDSAVAAKQINEAEVLASEADLQLAEVNLAKAKIVSPIDGVILTRSVN-PGATVAASL 240

Query: 316 -QPLM-KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             P++  I    K   ++  V    +  +  G  A      Y D       A IE+I   
Sbjct: 241 SAPILFTIAGDLKKMELQVDVDEADVGKIAVGQKAKFTVDAYPDRSFP---AEIEQI-RF 296

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            S+  NN+ T   Y+ IL +      + ++ LR G  A    T +
Sbjct: 297 ASEVVNNVVT---YKAILSVD-----NADLLLRPGMTATADITVE 333



 Score = 43.5 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 56/140 (40%), Gaps = 4/140 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + V+++G +   + V +I S  SG ++   V+  S I  G  L   +  +   
Sbjct: 72  AKRGDLTVLVTATGSVQPTEQV-DISSELSGTVRDVNVDYNSTIKAGDVLALLDTNKLEA 130

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE---KAFESREEQLLDFLGKYHSTCSK 151
            +   +  + + + ++    + L+  +   + L+   ++  S ++ L D   KY S  + 
Sbjct: 131 DVKSSRAKVNSAKANVAKANADLESASTSLERLKSLVRSNVSTQQSLDDATYKYDSAVAA 190

Query: 152 VFNYGISSVYRSLKMKLTRM 171
                   +     ++L  +
Sbjct: 191 KQINEAEVLASEADLQLAEV 210


>gi|300694403|ref|YP_003750376.1| secretion protein hlyd [Ralstonia solanacearum PSI07]
 gi|299076440|emb|CBJ35757.1| putative secretion protein HlyD [Ralstonia solanacearum PSI07]
          Length = 437

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/273 (11%), Positives = 92/273 (33%), Gaps = 35/273 (12%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               ++    I+S+     +   +             +    +  L++ Q+     + L+
Sbjct: 87  ELKRQLREAEIASIQARQALSAAQQIESSTEYQAAARRLLAAQNSLAAAQRRGREAQMLY 146

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +K  +++ +L+  ++ +  S  ++     E   +    +                   +L
Sbjct: 147 DKGIIARTELDAGKQEIDTSQSQVDGARDEIATLRLKRSAAALRV------------LEL 194

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV-----------YNQSFSSSNYAQQS 315
           +Q  R       +L  L    +  T+LSPI+G ++             +  ++       
Sbjct: 195 DQENRQL-----RLEELRAKLKATTMLSPISGVVLYPEPVDGNEPSGRKELNAGAAITPK 249

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--- 372
             ++  V  +    I+  V  + I+ V  G    V     +D     F   ++++     
Sbjct: 250 DVILT-VGDTSAFLIKTWVDEEDIRRVAPGQAVRVVLAADSDQ---AFAGTVQRVSSQAK 305

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            +  +  + ++   +EV + +   A +  ++ +
Sbjct: 306 TVDGRGQSNRSTAEFEVQILLKPPAEAGKSLRV 338



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 50/155 (32%), Gaps = 5/155 (3%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK---S 115
           I +P  G++    V+ G  +  G  L    D E    +   +++    R  +   +   S
Sbjct: 55  ITAPVEGVLLAKSVQFGDTVTAGQKLAQVSDTELKRQLREAEIASIQARQALSAAQQIES 114

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           + ++      +L         Q      +       +    + +  + +    +++    
Sbjct: 115 STEYQAAARRLLAAQNSLAAAQRRGREAQMLYDKGIIARTELDAGKQEIDTSQSQVDGAR 174

Query: 176 LNR--LDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
                L L+  ++ LR L    +     ++ L  K
Sbjct: 175 DEIATLRLKRSAAALRVLELDQENRQLRLEELRAK 209


>gi|237721064|ref|ZP_04551545.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229449899|gb|EEO55690.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 406

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 72/215 (33%), Gaps = 17/215 (7%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDL 266
             +++ D    +  +            E +   ++        E +L      ++   + 
Sbjct: 86  QLIAEMDRVTLQSELASQQATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ + ++    + L   E+     TI SPI G ++  +   +            L  I  
Sbjct: 146 QKAKSSYDSSKASLAKAERNLSYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNN 380
                 + A V    I  + +G  A+     Y +     F+ I+ +I   D   +   N+
Sbjct: 205 DLTQMQVVADVDEADIGGIIEGQRASFTVDAYPND---VFEGIVTQIRLGDASSTSSTNS 261

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             T   YEV++        + +++L+    A V  
Sbjct: 262 TSTVVTYEVVISAP-----NPDLKLKPRLTANVTI 291



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 69/186 (37%), Gaps = 4/186 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII K  V+  S++ +G  +   + +     +  +
Sbjct: 45  ISNSVTATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSEVTKGQLIAEMDRVTLQSELASQ 103

Query: 100 KVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + +    +   + +K   +    L+ K  + +  FE            Y S+ + +    
Sbjct: 104 QATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNYQKAKSSYDSSKASLAKAE 163

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +  Y ++   +  +             S      L +   DLT M+ + + +      +
Sbjct: 164 RNLSYATITSPIDGVVISRDVEAGQTVASGFETPTLFTIAADLTQMQVVADVDEADIGGI 223

Query: 217 NQQERI 222
            + +R 
Sbjct: 224 IEGQRA 229


>gi|70733650|ref|YP_257290.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
 gi|68347949|gb|AAY95555.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
          Length = 356

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 79/259 (30%), Gaps = 23/259 (8%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              + +  L+N  + L    S   +    +     + A ++++LN+              
Sbjct: 94  ETLVAKAQLQNARATLDRQSSVIAQAQAALSAAQAERAFAEHELNR----YNHLAGVGAG 149

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISR-DLEQNQRTFAD-----EMSKLTILEKT 286
            +   +     I++         A    E  + ++   QR  A+       + L +    
Sbjct: 150 TVQNAQQARTRIDQASARLATATAALAAERKQVEILTAQRDAAEGGLKRAQAALEMASYE 209

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                I++P+ G +   ++     Y      ++ +VP  +   + A     Q+  +  G 
Sbjct: 210 LSYTRIVAPVDGMV-GERAVRVGAYVTPGSKILAVVPLQQAYVL-ANFQETQLTAMHAGQ 267

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNN 402
              VR               +E + P      +    +  T  + +V+ +I      + N
Sbjct: 268 VVEVRVDSLGGET---LHGRVESLAPATGVTFAAVKPDNATGNFTKVVQRIPVKILLEPN 324

Query: 403 ----IELRNGFPAEVLFTA 417
                 LR G   E     
Sbjct: 325 QPLAERLRVGMSVEASVDT 343



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/244 (10%), Positives = 67/244 (27%), Gaps = 15/244 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK+  VE+  Q+  G  L   +D +               +  +   ++ LD  ++  
Sbjct: 57  GFIKEVLVEDNQQVKAGQLLALIDDRDLRAAAQAADAETLVAKAQLQNARATLDRQSSVI 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              + A  + + +      +  +         ++ V         + R+           
Sbjct: 117 AQAQAALSAAQAE------RAFAEHELNRYNHLAGVGAGTVQNAQQARTRIDQASARLAT 170

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ---ERIVYKSTLELRENIHEQKNML 241
           ++   A      + LT  ++  E          +    E    +    +   + E+   +
Sbjct: 171 ATAALAAERKQVEILTAQRDAAEGGLKRAQAALEMASYELSYTRIVAPVDGMVGERAVRV 230

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR------EQKTILSP 295
                   +           +  + ++ Q T       + +   +        +   L+P
Sbjct: 231 GAYVTPGSKILAVVPLQQAYVLANFQETQLTAMHAGQVVEVRVDSLGGETLHGRVESLAP 290

Query: 296 IAGT 299
             G 
Sbjct: 291 ATGV 294


>gi|254502403|ref|ZP_05114554.1| putative auxiliary transport protein, MFP family [Labrenzia
           alexandrii DFL-11]
 gi|222438474|gb|EEE45153.1| putative auxiliary transport protein, MFP family [Labrenzia
           alexandrii DFL-11]
          Length = 338

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 66/220 (30%), Gaps = 31/220 (14%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             ++       + +   +  +A+L   +     +  L E   V++  L+   R + ++  
Sbjct: 92  QALQVAKDGVEEAKTNVTATKAILDDAEATQRRLSTLQESGVVTEQRLDDATRDLAEAQA 151

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                +  +      + +   E     A                         + +   E
Sbjct: 152 NYERALAARTGAQDQLKQKAAELRQATAEK----------------------AVADYNLE 189

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           Q  + +P  G +V   + +   Y      ++ +V  +    + A V  + +Q +K G   
Sbjct: 190 QTVVRAPFDGQVVPFNTKT-GQYLDAGDVVLILVSRTGYRIV-ANVHEQHVQFIKPGQPV 247

Query: 349 TVRFPHYADIREK--KFKAIIEKIDPIISQQDNNLQTQEY 386
                +Y         F+  +  I   I++     Q   Y
Sbjct: 248 -----YYMVSTAPWVFFEGSVRGISKGIARSTLETQALPY 282



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/148 (12%), Positives = 40/148 (27%), Gaps = 2/148 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V N +++ +G PL T +        +    ++      +   K  ++      
Sbjct: 49  GTLAELHVTNDTEVRKGDPLFTLDQTPYKLAAESAAANVAVSEQALQVAKDGVEEAKTNV 108

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   +  E           S    V    +    R L             R   +++
Sbjct: 109 TATKAILDDAEATQRRLSTLQESGV--VTEQRLDDATRDLAEAQANYERALAARTGAQDQ 166

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                A L     +  +     E+  V 
Sbjct: 167 LKQKAAELRQATAEKAVADYNLEQTVVR 194


>gi|221067230|ref|ZP_03543335.1| secretion protein HlyD family protein [Comamonas testosteroni KF-1]
 gi|220712253|gb|EED67621.1| secretion protein HlyD family protein [Comamonas testosteroni KF-1]
          Length = 407

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 88/293 (30%), Gaps = 29/293 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+    + +          +++    L                     + + A     
Sbjct: 104 QALVRIDSRSYEAAVAQAQAQLANAQAQLSNSEQTQAQNRATLSASRAGLAAVEAEAQRS 163

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q +L  ++ L E+ +VS N     ER   ++T  L      +      IN+   +A    
Sbjct: 164 QAELKRVQELAERGSVSLN-----ERDKVRATSRLAATNVAKAQADIAINQEKIKATT-- 216

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                 + RD  + Q   A+ +  L   +   +   + +P  G +          Y    
Sbjct: 217 ------VGRDSLKAQVQMAEAL--LRQAQINLDNTVVHAPSDGQVSEVSVR-KGQYVAAG 267

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             LM +VP     ++ A     Q   V+ G   +        +R    K  + +I P   
Sbjct: 268 TQLMYVVPP--TYWVVANYKETQTARVQIGQLVSFSVDALGGLR---LKGHVLEIAPATG 322

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +      +  T  + +V+    +KI       +   LR G    V       
Sbjct: 323 SEFSVLKADNATGNFTKVVQRLPIKIAIDEGQADAARLRPGMSVIVRLDTAQK 375



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/210 (11%), Positives = 73/210 (34%), Gaps = 24/210 (11%)

Query: 16  SLKRMTLLSIIGIIGLI----TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           SL+ + ++ ++ + G++     W++  P   SV ++        V  +    +G + +  
Sbjct: 35  SLRSVLIMLVVALAGMLLVLRAWNLW-PFNSSVVTTDNAYVRGAVTVLAPQVNGYVTEVL 93

Query: 72  VENGSQILQGTPLLTFED--------------IETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           V++  Q+  G  L+  +                     +   + +    R  +   ++ L
Sbjct: 94  VKDYEQVKAGQALVRIDSRSYEAAVAQAQAQLANAQAQLSNSEQTQAQNRATLSASRAGL 153

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHS-----TCSKVFNYGISSVYRSLKMKLTRMR 172
             +  +    +   +  +E         +        S++    ++     + +   +++
Sbjct: 154 AAVEAEAQRSQAELKRVQELAERGSVSLNERDKVRATSRLAATNVAKAQADIAINQEKIK 213

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           +  + R  L+ +  +  ALL   Q +L   
Sbjct: 214 ATTVGRDSLKAQVQMAEALLRQAQINLDNT 243


>gi|54293642|ref|YP_126057.1| hypothetical protein lpl0695 [Legionella pneumophila str. Lens]
 gi|53753474|emb|CAH14929.1| hypothetical protein lpl0695 [Legionella pneumophila str. Lens]
          Length = 281

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 71/221 (32%), Gaps = 18/221 (8%)

Query: 206 FEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEI 262
            +K  V ++ D +     +  +  +L + I  QKN  R     E   +          + 
Sbjct: 68  VKKGQVLARLDKDTFIANLEAAKAQLEQAIANQKNASRTYKRREQLVDDGAVSKALFDDA 127

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
               + +    +   + L   + +     I +P  GTI+  +          ++P+  + 
Sbjct: 128 VAMKDSSSAEVSVAKANLEKAQISLNDTEIHAPTHGTILT-RIQEPGAIVNVAEPVYTLA 186

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS-----QQ 377
                 ++R  +    +  V  G  A V   +     EK +K  I  I P         +
Sbjct: 187 -IDNPVWVRTYIDEPFLGRVYPGQDALV---YTDSNPEKPYKGHIGFISPQAEFTPKIVE 242

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
              L+T   Y + + I           LR G P  V    K
Sbjct: 243 TTQLRTDLVYRIRVVIDQPDNG-----LRQGMPVTVKIHLK 278



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 31/106 (29%), Gaps = 3/106 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFL 120
           SG I    V+ G+ + +G  L   +       ++  K  ++       +        + L
Sbjct: 54  SGRILSMDVDEGAHVKKGQVLARLDKDTFIANLEAAKAQLEQAIANQKNASRTYKRREQL 113

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            +   V +  F+           +     + +    IS     +  
Sbjct: 114 VDDGAVSKALFDDAVAMKDSSSAEVSVAKANLEKAQISLNDTEIHA 159


>gi|227819638|ref|YP_002823609.1| hypothetical protein NGR_b14050 [Sinorhizobium fredii NGR234]
 gi|227338637|gb|ACP22856.1| putative membrane protein [Sinorhizobium fredii NGR234]
          Length = 334

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 97/315 (30%), Gaps = 34/315 (10%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L  ++D  + +L F  +      +  E    +  D + +  +   +       +   +L+
Sbjct: 38  LYGNVDIRQVSLGFRVSGRIAELRVDEGDAIKAGDVIARLDAEPFQQALDAAEADAEALR 97

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNAVSQNDLNQQERIV 223
             L ++++        + +++    L      +L   +   L     +SQ +L+Q     
Sbjct: 98  ATLAKLKAGARPTEIAQARAAHDERLAELQNAELAYQRAQRLRPAGTISQAELDQAIATR 157

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +T            +                        D+   +       +K    
Sbjct: 158 AAATARAASAREALALLEEGSR-----------------VEDIATAEAQANAATAKAASA 200

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               +   +++P AG I+  +          +  +  ++  ++  ++RA V    +  V 
Sbjct: 201 RTALKDVELVAPSAGVILS-RVREVGAVVSPADTV-YVLSLTEPVWVRAYVAEPNLGRVH 258

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAF 398
            G    V            ++  I  I P+      S +   L+T   Y + + I     
Sbjct: 259 PGMKVKV---TSDTNPGHGYEGTIGFISPVAEFTPKSVETPELRTDLVYRLRIVI----- 310

Query: 399 SDNNIELRNGFPAEV 413
           +    +LR G P  V
Sbjct: 311 AKPGTDLRQGMPVTV 325



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 32/99 (32%), Gaps = 3/99 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL---DFL 120
           SG I + +V+ G  I  G  +   +       +D  +   + LR  +   K+     +  
Sbjct: 54  SGRIAELRVDEGDAIKAGDVIARLDAEPFQQALDAAEADAEALRATLAKLKAGARPTEIA 113

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +    E+  E +  +L     +       +    +  
Sbjct: 114 QARAAHDERLAELQNAELAYQRAQRLRPAGTISQAELDQ 152


>gi|329957968|ref|ZP_08298400.1| efflux transporter, RND family, MFP subunit [Bacteroides clarus YIT
           12056]
 gi|328522117|gb|EGF49233.1| efflux transporter, RND family, MFP subunit [Bacteroides clarus YIT
           12056]
          Length = 355

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 39  PIEISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
            I+   S++G+  +     V   +        SG I+K  V++G+++  G  L   +  +
Sbjct: 33  KIDTVTSANGQTYLQYPGKVKAAQDISLAFRVSGTIRKIYVKDGARVQAGQLLAELDPTD 92

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
               +D  +   K ++   +   +            +KA
Sbjct: 93  YQVQLDATEAEYKQIKAEAERVMALYKENGTTPSANDKA 131


>gi|294675724|ref|YP_003576339.1| family 2 glycosyl transferase [Rhodobacter capsulatus SB 1003]
 gi|294474544|gb|ADE83932.1| glycosyl transferase, family 2/group 1 [Rhodobacter capsulatus SB
           1003]
          Length = 1993

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 60/217 (27%), Gaps = 22/217 (10%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +   L+  K   I  L   +    S    L  + D   K  E    +             
Sbjct: 351 QAQSLLSEKVKEINALNARLAEVGSTGQMLQQRLDDAAKRLEDSAAE--------QGQRD 402

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM--------M 202
           +     I+ +   L     ++ +    R  +E +   L   L     DL          +
Sbjct: 403 EATQARIAQMEEQLSEARAKLEAGLAERSRIETERWQLEQDLMLRLADLEAKLTASQTQI 462

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-- 260
           ++L  +       L   ER +  +  EL +   E+      +  + +    E        
Sbjct: 463 EHLQAERDELVARLATAERALTDAAAELEQERIEKAETTAQLAAVSEGLEAERGERRAVE 522

Query: 261 ----EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               E+ + L   +    +   +LT   +   +    
Sbjct: 523 TRLGELHQQLTGTREELTETRGRLTETREQLTETQNR 559



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 69/213 (32%), Gaps = 22/213 (10%)

Query: 91  ETTDLIDLKKVSIKN---LRCHIDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGKYH 146
           +  + +   +  ++     R  I+TE+  L+  L  +   LE    + + Q+     +  
Sbjct: 411 QMEEQLSEARAKLEAGLAERSRIETERWQLEQDLMLRLADLEAKLTASQTQIEHLQAERD 470

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                     +++  R+L      +    + + +   + + +   L + + +   ++   
Sbjct: 471 E-----LVARLATAERALTDAAAELEQERIEKAETTAQLAAVSEGLEAERGERRAVET-- 523

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
                    L +  + +  +  EL E           + E  +   +E  + L E    L
Sbjct: 524 --------RLGELHQQLTGTREELTETRGRLTETREQLTETQNRL-IEARDGLAETRVKL 574

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                  A+   +L    +   +    + + GT
Sbjct: 575 SDTSAQLAETREQLAGAHELLTET--RAALTGT 605


>gi|229076071|ref|ZP_04209039.1| multidrug resistance protein A [Bacillus cereus Rock4-18]
 gi|229099029|ref|ZP_04229963.1| multidrug resistance protein A [Bacillus cereus Rock3-29]
 gi|228684257|gb|EEL38201.1| multidrug resistance protein A [Bacillus cereus Rock3-29]
 gi|228706934|gb|EEL59139.1| multidrug resistance protein A [Bacillus cereus Rock4-18]
          Length = 225

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 61/173 (35%), Gaps = 17/173 (9%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSS 309
           A  +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++
Sbjct: 62  AAGKLTDWKAEVGKNYNEN-----DKLGAVTVAGANGEQTVDVTIPQNATVVQSNA-TTN 115

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            +     P+          ++ A +    +  V+KG    V    Y D         +E+
Sbjct: 116 AFVGAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LSGKVEQ 171

Query: 370 IDPIISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
           +    +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 172 VGLTTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 224


>gi|228923312|ref|ZP_04086600.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228960837|ref|ZP_04122472.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228981265|ref|ZP_04141565.1| multidrug resistance protein A [Bacillus thuringiensis Bt407]
 gi|229048276|ref|ZP_04193844.1| multidrug resistance protein A [Bacillus cereus AH676]
 gi|229072070|ref|ZP_04205279.1| multidrug resistance protein A [Bacillus cereus F65185]
 gi|229112033|ref|ZP_04241576.1| multidrug resistance protein A [Bacillus cereus Rock1-15]
 gi|229129852|ref|ZP_04258818.1| multidrug resistance protein A [Bacillus cereus BDRD-Cer4]
 gi|229147127|ref|ZP_04275486.1| multidrug resistance protein A [Bacillus cereus BDRD-ST24]
 gi|229152763|ref|ZP_04280946.1| multidrug resistance protein A [Bacillus cereus m1550]
 gi|228630583|gb|EEK87229.1| multidrug resistance protein A [Bacillus cereus m1550]
 gi|228636376|gb|EEK92847.1| multidrug resistance protein A [Bacillus cereus BDRD-ST24]
 gi|228653543|gb|EEL09415.1| multidrug resistance protein A [Bacillus cereus BDRD-Cer4]
 gi|228671356|gb|EEL26657.1| multidrug resistance protein A [Bacillus cereus Rock1-15]
 gi|228711004|gb|EEL62970.1| multidrug resistance protein A [Bacillus cereus F65185]
 gi|228723001|gb|EEL74378.1| multidrug resistance protein A [Bacillus cereus AH676]
 gi|228778465|gb|EEM26732.1| multidrug resistance protein A [Bacillus thuringiensis Bt407]
 gi|228798859|gb|EEM45838.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228836266|gb|EEM81619.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 225

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 65  KLTDWKAEVGKNYNEN-----DKLGTVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 118

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 119 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LTGKVEQVGL 174

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 175 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 224


>gi|255035595|ref|YP_003086216.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
 gi|254948351|gb|ACT93051.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
          Length = 364

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 75/212 (35%), Gaps = 21/212 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENI--HEQKNMLRHINELYDEANLEFANY--LKEISRDL 266
           V++  +  + R    S L  +  +   +     R +       +   A+   L E   ++
Sbjct: 91  VTKGQVLAEMRSTELSELSSQRRVLDSQLAVAQRKLAAAQSMFDDRIASEKDLAEAKSEV 150

Query: 267 EQNQRTFADEMSKLTILEKTREQKT--ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           E  +       + L++   + E+    I +P++G +V N   S       S+  +  +  
Sbjct: 151 EVVRSEIDKIAANLSLYNASSEKGVFQIKAPVSGYVVENNV-SEGTQVGSSESGLFTISD 209

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
               ++ A +    +  V KG  A ++   Y     + F+  I  I  +   Q+      
Sbjct: 210 LSEVWVTANIYAVDLSFVTKGMKAIIKSKAYP---GEFFEGTISDISQVFDPQE------ 260

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 +    +   + +++L+ G   E + T
Sbjct: 261 -----RVLKARIRMPNKDLKLKPGLTIEAVVT 287



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 51/127 (40%), Gaps = 2/127 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEI-KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +++ P+  S+  +G+I    N V    S  +G+I +  V  G ++ +G  L      E +
Sbjct: 47  AVIEPVTESIRLTGQIEYNPNQVVHYTSLVTGVITRSHVSLGDRVTKGQVLAEMRSTELS 106

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +L   ++V + +       + +A   + +     EK     + ++     +     + + 
Sbjct: 107 ELSSQRRV-LDSQLAVAQRKLAAAQSMFDDRIASEKDLAEAKSEVEVVRSEIDKIAANLS 165

Query: 154 NYGISSV 160
            Y  SS 
Sbjct: 166 LYNASSE 172


>gi|332664043|ref|YP_004446831.1| secretion protein HlyD family protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332332857|gb|AEE49958.1| secretion protein HlyD family protein [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 322

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 51/159 (32%), Gaps = 7/159 (4%)

Query: 39  PIEIS-----VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           P++ +     V     I     ++ I +  +G +K+        + +G  L+  E    T
Sbjct: 38  PLDSTMNVKEVVGIARIEPSGKIISINAETAGFVKEVLFAENQAVKKGEVLVVLESAIET 97

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +   +  IK  +  ID   + L+ L  K    +  +    +          S     F
Sbjct: 98  AQLRQTQSRIKTQQAAIDAAVANLESLRVKLANAQNTYNRNLKLQQGNAATQQSVDDSRF 157

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           N  +  + + L  +   +        +L     L +  L
Sbjct: 158 N--VDDLQKQLAAQAANIEQQRARLEELRTDIGLSQTQL 194


>gi|225569755|ref|ZP_03778780.1| hypothetical protein CLOHYLEM_05849 [Clostridium hylemonae DSM
           15053]
 gi|225161225|gb|EEG73844.1| hypothetical protein CLOHYLEM_05849 [Clostridium hylemonae DSM
           15053]
          Length = 458

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 100/269 (37%), Gaps = 26/269 (9%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I+ S+  +GE+  ++ ++ + +    ++ +  V  G Q+  G  L   +  +   ++  
Sbjct: 43  EIDKSIEGNGEVRGKNEMLVVTA-EGLLVSQVDVMPGEQVKAGDVLYHIDIEDARKMVAQ 101

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           K+  IK L+          + + N+ +  EK                +   ++ +   +S
Sbjct: 102 KEDEIKTLQLQ-------SEEVTNQNNRTEK-----------NETVNYGHLAENYEAAVS 143

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND--L 216
           +   +LK     + S Y  +   ++K +  +       ++    K+   K  + Q +  L
Sbjct: 144 NRTDNLKRAQQDIDSAYEKQKTGKDKLAEKKQEYDKAVQEGNSQKSEELKALIEQLEEQL 203

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           +  E  + +      + + +Q N++R   +  ++A +           D+   Q+     
Sbjct: 204 DTYETEIGEKERSYGQVVEDQDNIVRAARQELEKAGIGEPENTTAQQNDIAAAQKQ---- 259

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQS 305
             +L+ L++      I +P  G +     
Sbjct: 260 -KELSQLKEIITDDKITAPKDGVVKEILI 287


>gi|166712708|ref|ZP_02243915.1| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 372

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 81/268 (30%), Gaps = 28/268 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y +    + +       L S + D    K+L    A+S 
Sbjct: 72  EGAVQQAEANLAKTVRQVRGLYRSVEGAQAELFAREVALRSARSDFARRKDLAATGAISN 131

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L                     ++ L         +   F      +      NQ   
Sbjct: 132 EEL------------------AHARDELAAAEAAVSGSRESFERNRALVDDSAVANQPDV 173

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L        +  +++P++G +   ++       Q    LM +VP  +  ++ A 
Sbjct: 174 QTAAAQLRQAYLNHTRTGVVAPVSGYVAR-RAAQVGQRVQPGSVLMVVVPL-EQVWVEAN 231

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----E 385
               Q++H++ G    +    Y        + +++ +            N         +
Sbjct: 232 FKETQLKHMRLGQEVELHSDLYGGGVSYTGRIQSLGLGTGSAFSLLPAQNASGNWIKIVQ 291

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
              V + +     + N + +      EV
Sbjct: 292 RVPVRIAVDSKQLASNPLRIGLSMKVEV 319



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 72/201 (35%), Gaps = 17/201 (8%)

Query: 20  MTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           M +++I+ IIGL+ W  L+       + +         + N V+I     G +     E+
Sbjct: 1   MAIVAILAIIGLVVWYFLVGRWHEDTDDA-------YVQGNQVQITPMVGGTVVSIGAED 53

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++ +G  L+  +  +T   +   + ++      +     +++    + ++  +    R
Sbjct: 54  GMRVERGQLLVQLDPADTEGAVQQAEANLAKTVRQVRGLYRSVE--GAQAELFAREVALR 111

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             +      K  +    + N  ++     L        ++  +R   E   +L+     +
Sbjct: 112 SARSDFARRKDLAATGAISNEELAHARDELAAAEA---AVSGSRESFERNRALVDDSAVA 168

Query: 195 HQKDLTMMKNLFEKNAVSQND 215
           +Q D+        +  ++   
Sbjct: 169 NQPDVQTAAAQLRQAYLNHTR 189


>gi|261822724|ref|YP_003260830.1| efflux pump membrane protein [Pectobacterium wasabiae WPP163]
 gi|261606737|gb|ACX89223.1| efflux pump membrane protein [Pectobacterium wasabiae WPP163]
          Length = 391

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 86/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +    L +  L+  Q DL+  + L   NA+ +
Sbjct: 99  QQAFERAKTALANSVRQTHQLIINSKQYQANIELRQTELNKAQSDLSRREALGSANAIGR 158

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++      V  +   L     + +     I +   E          E+           
Sbjct: 159 EEVQHARDAVATAKAALEVARQQYQANQAMILDTPLEKQPAIQQASVEMRDAWL------ 212

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         ++  I+SPI G I   +S         +  LM +VP +   ++ A 
Sbjct: 213 ------------ALQRTKIVSPIDGYISR-RSVQIGARISSTSALMAVVPANH-LWVDAN 258

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G  ATV    Y D     ++  +  +D          P  +   N ++ 
Sbjct: 259 FKETQLANMRIGQPATVIADIYGDDV--VYQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 316

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V ++I     +++ + +
Sbjct: 317 VQRLPVRIEIDPKQVAEHPLRI 338



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 50/160 (31%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN------ 105
              N ++I +  +G +    V+N   + QG  L+  +  +     +  K ++ N      
Sbjct: 58  VAGNQIQIMAQVTGSVTHVNVDNTDFVKQGQVLVELDPTDAQQAFERAKTALANSVRQTH 117

Query: 106 -LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    ++ ++    + +  +     RE                      +     +
Sbjct: 118 QLIINSKQYQANIELRQTELNKAQSDLSRREALGSANAIGREEVQHARDAVATAKAALEV 177

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +  +     +    LE + ++ +A +      L + + 
Sbjct: 178 ARQQYQANQAMILDTPLEKQPAIQQASVEMRDAWLALQRT 217


>gi|300772183|ref|ZP_07082053.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300760486|gb|EFK57312.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 376

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 93/261 (35%), Gaps = 30/261 (11%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           YR +K +++   SI  N  D+    S+L  ++ + Q +L           V +  +    
Sbjct: 63  YRPVKEQISLTGSISYNEDDVVKFKSMLEGVVENVQFNLG--------QFVKRGQVLATV 114

Query: 221 RI--VYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADE 276
           R   V   + E +   ++     + ++      +  L  A  ++E+  +L   Q      
Sbjct: 115 RSTSVNDMSNERQSLTNQIALARQKVSSTQSMFQDGLASARQVEEVRMELATLQSALQSL 174

Query: 277 MSKLTILEKTREQK--TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
            + + +   T  +    I +P  G IV                L  +  + +  ++   +
Sbjct: 175 DANMNLYNATSHRGVFEIKAPKDGYIVEKNLN-PGANINNEDQLFALS-NLRQIWVMVNI 232

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               +Q+VK G T  V+   Y D     F   I++I  +  Q +            +   
Sbjct: 233 YANNLQYVKNGATVAVKTLAYPDEI---FTGKIQQISNVFDQDE-----------RVLKA 278

Query: 395 DLAFSDNNIELRNGFPAEVLF 415
            +   + ++ L+ G  A+V+ 
Sbjct: 279 RVLLDNADLRLKPGMSADVII 299


>gi|239993205|ref|ZP_04713729.1| membrane fusion protein [Alteromonas macleodii ATCC 27126]
          Length = 350

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/249 (11%), Positives = 82/249 (32%), Gaps = 29/249 (11%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI- 244
             ++       + +   + +     +    L +    +  + L+ + N    +N   ++ 
Sbjct: 75  GQVKQWHVREGQQIKAGEPIVTLIDIDAQRLEKLRSQLSAANLKNQANETAVRNAENNLA 134

Query: 245 -NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL---SPIAGTI 300
             +   E  L     +++    +++ +   A  +S++  +     +++     +P+ GT+
Sbjct: 135 RQQSLQEQGLVSRKEVEQAEIKVQELRAKAAASVSEINEVSMILSRQSTQTKYAPVDGTV 194

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV--------RF 352
           V   S   S + +    L + +P      +R  V       VK G  A +        +F
Sbjct: 195 VRLLSGGVSTFVKSGDILGQFIPADAKRSVRVTVRGLDAPLVKPGAKARLQFDGWPVFQF 254

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             +       F   +  ++P+ +   +       + V ++  +             +PAE
Sbjct: 255 SGWPGSAIGTFGGEVVYVEPVANATGD-------FNVWIRPDESDIP---------WPAE 298

Query: 413 VLFTAKNTT 421
                 +  
Sbjct: 299 SSARLGSRV 307



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 9/167 (5%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKF 70
           P   + +T + I  ++         P   +   +G +     +D    I +   G +K++
Sbjct: 21  PKLHRVITGVIIFLVLAAGLILYFTPWIQTAYGTGMVDSLDPKDRTQPINALVDGQVKQW 80

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLK-KVSIKNLRCHID--TEKSALDFLNNKYDVL 127
            V  G QI  G P++T  DI+   L  L+ ++S  NL+   +    ++A + L  +  + 
Sbjct: 81  HVREGQQIKAGEPIVTLIDIDAQRLEKLRSQLSAANLKNQANETAVRNAENNLARQQSLQ 140

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           E+   SR+E       +      +       S    + M L+R  + 
Sbjct: 141 EQGLVSRKE---VEQAEIKVQELRAKAAASVSEINEVSMILSRQSTQ 184


>gi|229032214|ref|ZP_04188187.1| multidrug resistance protein A [Bacillus cereus AH1271]
 gi|228728994|gb|EEL79997.1| multidrug resistance protein A [Bacillus cereus AH1271]
          Length = 225

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 65  KLTDWKAEVGKNYNEN-----DKLGAVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 118

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 119 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LSGKVEQVGL 174

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 175 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVSVRIH 224


>gi|227113622|ref|ZP_03827278.1| multidrug resistance protein A [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 391

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 85/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     L   + +   + +N    +    L +  L+  Q DL+  + L   NA+ +
Sbjct: 99  QQAFERAKTGLANSVRQTHQLIINSKQYQANIELRQTELNKAQSDLSRREALGSANAIGR 158

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++      V  +   L     + +     I +   E          E+           
Sbjct: 159 EEVQHARDAVATAKAALEVARQQYQANQAMILDTPLEKQPAIQQASVEMRDAWL------ 212

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         ++  I+SPI G +   +S         +  LM +VP +   ++ A 
Sbjct: 213 ------------ALQRTKIVSPIDGYVSR-RSVQIGARISSTSALMAVVPANH-LWVDAN 258

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G  ATV    Y D     ++  +  +D          P  +   N ++ 
Sbjct: 259 FKETQLANMRIGQPATVIADIYGDDV--VYQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 316

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V ++I     +++ + +
Sbjct: 317 VQRLPVRIEIDPKQVAEHPLRI 338



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 57/187 (30%), Gaps = 10/187 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN------ 105
              N ++I +  SG +    V+N   + QG  L+  +  +     +  K  + N      
Sbjct: 58  VAGNQIQIMAQVSGSVTHVNVDNTDFVKQGQVLVELDPTDAQQAFERAKTGLANSVRQTH 117

Query: 106 -LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    ++ ++    + +  +     RE                      +     +
Sbjct: 118 QLIINSKQYQANIELRQTELNKAQSDLSRREALGSANAIGREEVQHARDAVATAKAALEV 177

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
             +  +     +    LE + ++ +A +      L + +          VS+  +    R
Sbjct: 178 ARQQYQANQAMILDTPLEKQPAIQQASVEMRDAWLALQRTKIVSPIDGYVSRRSVQIGAR 237

Query: 222 IVYKSTL 228
           I   S L
Sbjct: 238 ISSTSAL 244


>gi|221134444|ref|ZP_03560749.1| membrane-fusion protein-like [Glaciecola sp. HTCC2999]
          Length = 585

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 68/178 (38%), Gaps = 16/178 (8%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L +  E    A     + L   ++D  +  +  +D + KL    K ++  T  SP AG 
Sbjct: 162 QLVNAQEELLIALNRDNSSLISAAKDRLKALQLSSDFIQKLEKTRKVQQTITFYSPQAGF 221

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +   +      Y +    L+ I       ++ A+V  +    +KKG   ++       + 
Sbjct: 222 VDGLKVR-EGFYVKPGNTLLSIG-QLDQVWVEAEVFERDAALIKKGLPVSMTL---DYLP 276

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            + +  +++ + P ++ +   L       V LK     F + + +L+    A+V   A
Sbjct: 277 GEDWAGVVDYVYPTLNSKTRTL------RVRLK-----FDNTDYQLKPNMFAQVSIHA 323


>gi|289209476|ref|YP_003461542.1| efflux transporter RND family, MFP subunit [Thioalkalivibrio sp.
           K90mix]
 gi|288945107|gb|ADC72806.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           K90mix]
          Length = 379

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 70/216 (32%), Gaps = 25/216 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQ 270
           + D ++    V +     +    E+    R+++   D    +    + L +  + +   +
Sbjct: 110 RMDTDETRLEVRQREAADQRLDGERATAQRNLDRQQDLFARDLIPESELDDARQRVATLE 169

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +  S L +  K  E  T  +P    + +       + A   QPL+++V      + 
Sbjct: 170 AQLRENRSALELARKRLEYTTERAPFTAQVRHTHVR-PGDLAVSGQPLIELVGLEG-LHA 227

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
             +V  + I  ++ G    +  P               ++D +    D + ++  +    
Sbjct: 228 VLRVPERDILLLEPGLDVELTIPALEHTVT-------TRLDRVHPTLDISRRSGSF---- 276

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
               +    D    LR G  A+         + + +
Sbjct: 277 ----ETRLIDPPEALRPGMAAQA------RVVLEYL 302



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 55/146 (37%), Gaps = 4/146 (2%)

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++ +G  L+  +  ET   +  ++ + +     +D E++      ++   L       
Sbjct: 99  GDRVGEGEVLVRMDTDETRLEVRQREAADQ----RLDGERATAQRNLDRQQDLFARDLIP 154

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E +L D   +  +  +++     +      +++ T  R+ +  ++   +      A+   
Sbjct: 155 ESELDDARQRVATLEAQLRENRSALELARKRLEYTTERAPFTAQVRHTHVRPGDLAVSGQ 214

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQE 220
              +L  ++ L     V + D+   E
Sbjct: 215 PLIELVGLEGLHAVLRVPERDILLLE 240


>gi|153010714|ref|YP_001371928.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562602|gb|ABS16099.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 350

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 55/410 (13%), Positives = 117/410 (28%), Gaps = 86/410 (20%)

Query: 19  RMTLLSIIGIIG--LITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           R +L  IIG+ G  ++ W+  L P + +V ++        V  I    +G + K  V + 
Sbjct: 9   RGSLALIIGLAGVLMVLWAWQLPPFKHTVETTDNAYVRGQVTVISPQVAGYVTKVNVNDY 68

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + QG  L   +       +D    ++ + +  +                         
Sbjct: 69  QTVKQGDLLFEIDSRSYQQKLDQALAALNSKKAALA------------------------ 104

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                             N   S       ++  +             + S  +A L   
Sbjct: 105 ------------------NSEQSQRSAEATIQSRQ------------AQISGAKAALEVA 134

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + +   ++ L  +   +Q+  +     + ++   + E         + +  +    +   
Sbjct: 135 EANAKRVEALLPRGVTTQSSADTAHGTLLQAQASVEEAQAALAVAQQDLQSIIVNRDSLN 194

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A+                A+  + + +     +   I++P  GT+          Y    
Sbjct: 195 AD---------------IANAEATVELARIDLQNTHIIAPRDGTLGEVGVR-LGQYVTAG 238

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--- 372
             L+ +VP  K  ++ A     Q+  +K G   T         R  + K  IE   P   
Sbjct: 239 TQLVSVVPKIK--WVMANFKETQLYGMKIGQPVTFTVDAL---RHAELKGHIEAFAPAAG 293

Query: 373 -----IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                I S       T+    + ++I       +   L  G    V    
Sbjct: 294 SEFSVIKSDNATGNFTKITQRLSVRIAIDEDQPDAARLVPGMSVVVRVDT 343


>gi|332202420|gb|EGJ16489.1| ABC transporter [Streptococcus pneumoniae GA41317]
          Length = 335

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 91/293 (31%), Gaps = 18/293 (6%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL---ENKSSLLRALLSSH 195
           +       ++ S      I+ V + +        +I  NR  L       S+L   L + 
Sbjct: 45  VSNQANLANSSSSAIEQEITKVQQQIGEYQELRDAIINNRARLPTGNPHQSILNRYLIAS 104

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+         E+  +SQ  +NQ    +  S   L+       ++  + N L  +  +  
Sbjct: 105 QEQTQGT---AEEPFLSQ--INQSIAGLESSIASLKIQQAGIGSVATYDNSLATKIEVLR 159

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
             +L+  S+     +    +   +L    +     T+ +P  G +  N  F   N     
Sbjct: 160 TQFLQTASQQQLTVENQLTELKVQLDQATQRLGNNTLTAPSKGIVHLNSEFEGKNRIPTG 219

Query: 316 QPLMKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             + +I P    ++   I   V+   +  + KG T  ++     +         ++ ID 
Sbjct: 220 TEIAQIFPVITDTREVLITYYVSSDYLPLLDKGQTVRLKLEKIGNHGT-TIIGQLQTIDQ 278

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
             ++ +     +      L   D         ++ G    V       T    
Sbjct: 279 TPTRTEQGNLFKLTALAKLSNEDSKL------IQYGLQGRVTSVTAKKTYFDY 325


>gi|326389371|ref|ZP_08210939.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994734|gb|EGD53158.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 603

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 55/164 (33%), Gaps = 24/164 (14%)

Query: 261 EISRDLEQNQRTFADEMSKLTILEK----TREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           +++  LEQ +        +L    +    +     I SP +G I+ +             
Sbjct: 93  DLNNQLEQAKINLNLAEQQLNQDTQNYNSSIANLNITSP-SGGIIDSILVKEGQNVTPGT 151

Query: 317 PLMKIVPHSKLTYIRAKVTPK--QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           P+  I   +  +++  KV     QI+++K G  A +    Y           +E +    
Sbjct: 152 PVATI---ADYSHVTVKVPFNGVQIKNIKVGQKADIFL--YDSFTT--VTGTVEYVS--- 201

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            +Q     T +YY V + + +     +      G   +V     
Sbjct: 202 -EQPVPNNTVQYYYVTVGLDNPGALSD------GMRVQVSIHTD 238



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 57/445 (12%), Positives = 136/445 (30%), Gaps = 78/445 (17%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I + V+ +G +    +V  I    SG +KK   + G  + +G  L   ED +  + ++
Sbjct: 42  GNISMKVTGTGNL--SGDVRAITLKGSGTVKKVHFKVGDTVKKGDLLYEIEDDDLNNQLE 99

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K+++      ++ +    +      ++   +    +  L+                  
Sbjct: 100 QAKINLNLAEQQLNQDTQNYNSSIANLNITSPSGGIIDSILVKEGQNVTPGTPVATIADY 159

Query: 158 SSVYRSLKMKLTRMRSIYLNRLD---LENKSSLLRALLSSHQKD---------LTMMKNL 205
           S V   +     ++++I + +     L +  + +   +    +            +   L
Sbjct: 160 SHVTVKVPFNGVQIKNIKVGQKADIFLYDSFTTVTGTVEYVSEQPVPNNTVQYYYVTVGL 219

Query: 206 FEKNAVS---QNDL-----NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-- 255
               A+S   +  +     N  E  +   TL  +  ++        ++++Y         
Sbjct: 220 DNPGALSDGMRVQVSIHTDNGIETALEDGTLTAKNTVNVTAQTSGTVDKIYISQGQSVKK 279

Query: 256 --------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                   ++ +  +   +E ++    +  +    + +      I SPI G I+      
Sbjct: 280 GQLLIKLSSDNISNLQMQIENDKLKVMEAQNNYNQILQQINDLKIYSPIDGKIISQNIN- 338

Query: 308 SSNYAQQS------------------QPLMKIV--------PH------SKLTYIRAKVT 335
             +    S                   P++ I         P       +    I   V 
Sbjct: 339 EGDILGTSVASTNISNTNSQSQQSSFVPVLDITQLSTYESQPETAVIANNNKYIINLSVD 398

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              I+H+K G  A +      D+ +K F   + ++  + + Q+        Y VI+++  
Sbjct: 399 ETDIKHIKVGQQAQI---TTDDLPDKTFTGTVSEVSQLPTIQNGVSS----YNVIIEVDP 451

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNT 420
                    L  G    V  T    
Sbjct: 452 SE------GLMLGMSMNVSITVAEK 470


>gi|307822783|ref|ZP_07653014.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
 gi|307736387|gb|EFO07233.1| secretion protein HlyD family protein [Methylobacter tundripaludum
           SV96]
          Length = 323

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 59/141 (41%), Gaps = 6/141 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            L  IE +V++ G++  ++ V ++ +  +  ++K  V+ G  +  G  L   +       
Sbjct: 94  TLGDIEENVTAQGKLEPKEYV-DVGAQVTDQLQKIYVQIGDNVTAGQLLAQIDPRIYAAR 152

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYD-----VLEKAFESREEQLLDFLGKYHSTCS 150
           +   + +IKNL+  +  +++ + F   +YD     +  K    ++ Q  +F  K     +
Sbjct: 153 VQADEANIKNLQAQLIGQQAQVVFARQQYDRNHELLKSKGVSQQDNQNSEFNLKMAEATA 212

Query: 151 KVFNYGISSVYRSLKMKLTRM 171
                 I  V  +L    T +
Sbjct: 213 ASIQAQIEQVQSTLSGDKTNL 233


>gi|153832867|ref|ZP_01985534.1| multidrug resistance efflux pump [Vibrio harveyi HY01]
 gi|148870790|gb|EDL69689.1| multidrug resistance efflux pump [Vibrio harveyi HY01]
          Length = 407

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 52/410 (12%), Positives = 130/410 (31%), Gaps = 91/410 (22%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS--- 64
           N      A L  +  L  + +  +       P++    S G ++   ++     P S   
Sbjct: 23  NKATKSFAYLGGLGWLMFVWVGLI----NFTPMD---LSGGSVVQSPHIQL--RPDSTNV 73

Query: 65  -GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    ++   QI +G  +   +  +    ++   VS  + R  + T +  ++     
Sbjct: 74  KGKVDHIYIKPNQQIEKGQLIYELDPTQYEIALNQANVSADSARVALATAQGDIEIEEAN 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +  L +  E+ + QL           +   +Y +        ++  R+    +   D++ 
Sbjct: 134 HQALVQDLETSKSQL----------EAAKVDYKLQKKMLDRYVEQNRVVQNTITASDIDK 183

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +SS +                      ++++++   E  + K  +++             
Sbjct: 184 QSSAVD---------------------MARHNVLTLESQIKKKQVDI-----------SR 211

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                 +A L       E+ +              ++   +       + +P  G +   
Sbjct: 212 AKLAIHKAELAVETKQAELRQA-----------EEQIAKAQWDLNSTKVHAPADGFVTN- 259

Query: 304 QSFSSSNYAQQSQPLMKIVPH----SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
                    ++ Q +  ++P     +   Y+  +V  + I+++K G  A      Y    
Sbjct: 260 ------FILREGQRV-SMMPRINMYTNEKYVLMRVNHQAIRNIKPGQPAEFSSSVYPGKI 312

Query: 360 EK-KFKAIIEKI-----------DPIISQQDNNLQTQEYYEVILKITDLA 397
                + I+E             D + +    NLQ + ++ V LKI +  
Sbjct: 313 FSATVEGIVEATGESQGNLLGLDDSVRATTGKNLQNKHHF-VRLKIDEPE 361


>gi|270156681|ref|ZP_06185338.1| conserved hypothetical protein [Legionella longbeachae D-4968]
 gi|269988706|gb|EEZ94960.1| conserved hypothetical protein [Legionella longbeachae D-4968]
          Length = 317

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 95/235 (40%), Gaps = 14/235 (5%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++   K  S   +     ++ + ++ K ++  R++ I  +    +  +  L+   +  + 
Sbjct: 1   MNSEAKELSNYIEQQKIKLAELTKTAKFEIDIRLKQIQDSINHAQTINESLQEKKNRLES 60

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L + +  F+K  +S+ +L   +   Y S    +E I + +N L  +N+  ++    +  
Sbjct: 61  LLKIQEAAFKKGILSRLELTDIQVAYYDS----KEQITKNENTLIELNQDKNDYIESWNT 116

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            ++++   L Q+Q      +  + + E      T+LSP  G IV N+     ++  + Q 
Sbjct: 117 KIRDLQEKLAQSQFNLKKLIENIKLTE------TVLSPEDG-IVSNEYVKPGDFLTEKQT 169

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQ-HVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           L+ I+ H+K   + A      +   +  G  + V   H   +        +  + 
Sbjct: 170 LINIITHNKDLEVIAFF-NADVGKKIVVGMESKVFPKHVNVLEYGGIVGKVTFVS 223


>gi|229512890|ref|ZP_04402357.1| membrane-fusion protein [Vibrio cholerae TMA 21]
 gi|229350139|gb|EEO15092.1| membrane-fusion protein [Vibrio cholerae TMA 21]
          Length = 366

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 74/212 (34%), Gaps = 23/212 (10%)

Query: 209 NAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +++ ++ + + +     + L    +   + +     +     E N   A   K +  +
Sbjct: 91  GRIAEVEIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALKNKGLQGE 150

Query: 266 LE--QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           +          D  S L+ +++  +   + +P  G +         ++     P+  I+ 
Sbjct: 151 VAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPI-EKGDFVGIGDPVASII- 208

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 I A V+ + IQHV+    A +RF     I   + +  +  I  + S   N    
Sbjct: 209 DLHKLVIEADVSERHIQHVQLEQAARIRF-----IDGTQTQGKVRYISRLSSPATNT--- 260

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              + + +++ +   +     +  G  AEV  
Sbjct: 261 ---FAIEVEVDNPQQA-----IPAGVSAEVEL 284



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I + ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIQLYGRTAPDRQAK-IGAEIAGRIAEVEIAKGQMVTKNQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 127 AQLKVRQ----QEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 183 FDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLEQAA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGTQTQGKVRYISRL 253


>gi|156741189|ref|YP_001431318.1| RND family efflux transporter MFP subunit [Roseiflexus castenholzii
           DSM 13941]
 gi|156232517|gb|ABU57300.1| efflux transporter, RND family, MFP subunit [Roseiflexus
           castenholzii DSM 13941]
          Length = 621

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/340 (12%), Positives = 91/340 (26%), Gaps = 30/340 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                 ++     +   +    T K   +++       E   +     + D      +  
Sbjct: 215 TNAQIQLEQAVNQLTQAQSRYSTAKQNWEYVR------ETGADPIVRTVADPNRPGQTRP 268

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           + + +      Y +       +RS        +      R   ++  +      ++   N
Sbjct: 269 NILNDSQRQQYYDAFVQAEAALRSAENAVAQAQVNYDNARLAEANGVELAEGQLDVARAN 328

Query: 210 -----AVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                A  + D+    R    S    L     +Q+           EA       L+   
Sbjct: 329 RDLLFATPEPDVLAAARAQVASARAALDRMRGDQRGGQLEAARAAFEAAKANLERLRADP 388

Query: 264 R--DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           R  DL   +       +   +   T ++  + +P +G +               +P   I
Sbjct: 389 RPADLAAARAQVDGARAARDLARLTLDEAVLKAPFSGVVAEVNL-KVGEAPSPGRPA--I 445

Query: 322 VPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           V  + +  Y+   V    I  V  G   T+      ++      A +E I P+   Q   
Sbjct: 446 VLANLERFYVDVTVDEIDITRVSVGQPVTLTLDALPEVT---LAATVETIGPLALPQAAV 502

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                 Y+V +        + +  +R G            
Sbjct: 503 TS----YQVRI-----GIPNTDPRVRAGMSVGADIVVAER 533



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 77/253 (30%), Gaps = 12/253 (4%)

Query: 43  SVSSSGEILNEDNVVEI--KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +V+++G+I     V  +      +G + +  V  G  + +G PL   +  E    +   +
Sbjct: 59  TVNATGQIAP---VQTVNLSFAVTGRVAEVLVRPGDVVEKGQPLARLDTRELELRLTQAE 115

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +  ++ ++D   +     + +    E        QL    G   +   +     +   
Sbjct: 116 AQLAQVQANLDRLLAGPS--SAEIAAAEAQLAQAAGQLRQVEGSVTTADMRAAEEQLRQA 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              L   L   R   +   +   + + L   L   +  L+  K   +       +   Q 
Sbjct: 174 EARLNQLLNGPRESDVQTAEARIREAELN--LERQRAQLSAAKTNAQIQLEQAVNQLTQA 231

Query: 221 RIVYKSTLELRENIHEQKNM-LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +  Y +  +  E + E     +       +       N L +  R   Q    F    + 
Sbjct: 232 QSRYSTAKQNWEYVRETGADPIVRTVADPNRPGQTRPNILNDSQRQ--QYYDAFVQAEAA 289

Query: 280 LTILEKTREQKTI 292
           L   E    Q  +
Sbjct: 290 LRSAENAVAQAQV 302


>gi|261323276|ref|ZP_05962473.1| secretion protein HlyD family protein [Brucella neotomae 5K33]
 gi|261299256|gb|EEY02753.1| secretion protein HlyD family protein [Brucella neotomae 5K33]
          Length = 353

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 81  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 140

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++        +    + +       +       D+A    A   +++   +   + 
Sbjct: 141 NTVRVDALLPRGVTT----QSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 196

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 197 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVPAVK-- 253

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 254 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 310

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 311 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 350


>gi|162148621|ref|YP_001603082.1| multidrug resistance protein [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161787198|emb|CAP56791.1| putative multidrug resistance protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 330

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 85/281 (30%), Gaps = 25/281 (8%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           +     +   ++    +L      +  +         + +   A L   + D+   +   
Sbjct: 56  AIQDDDYRAHLAEKDATLGAARAALEVVQRQIGLETAQIAGAEAALRMAEADVAQRRLER 115

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            +      D +   R +  +  +L      +      ++      ++        +   L
Sbjct: 116 RRQHDLITDGSTSRRDLEIADADLARLSAARDRDAALVDAARRTQDV--------LRAKL 167

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            Q Q   +  +S   +         I SP+AG +     +    Y      + ++ P   
Sbjct: 168 VQAQEDVSAAVSARELAAIDLGYTRIASPVAGQVTARMVY-VGEYVGIGTQVARVAPLPD 226

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD----NNLQ 382
           +  + A     Q+ H++ G TA++    +       F+  ++ I P+   +      +  
Sbjct: 227 VWIV-ANFREVQLTHMRVGQTASITIDAFPGAI---FRGHVDSIGPVSGAETALLPPDNA 282

Query: 383 TQEY------YEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           T  +      + V + I       +   LR G  + V    
Sbjct: 283 TGNFTHIVQRFPVKIVIEPDQAGTD--LLRPGMSSHVSVRT 321


>gi|161620531|ref|YP_001594417.1| secretion protein HlyD family protein [Brucella canis ATCC 23365]
 gi|254702854|ref|ZP_05164682.1| secretion protein HlyD family protein [Brucella suis bv. 3 str.
           686]
 gi|260568234|ref|ZP_05838703.1| secretion protein HlyD [Brucella suis bv. 4 str. 40]
 gi|261753455|ref|ZP_05997164.1| secretion protein HlyD family protein [Brucella suis bv. 3 str.
           686]
 gi|161337342|gb|ABX63646.1| secretion protein HlyD family protein [Brucella canis ATCC 23365]
 gi|260154899|gb|EEW89980.1| secretion protein HlyD [Brucella suis bv. 4 str. 40]
 gi|261743208|gb|EEY31134.1| secretion protein HlyD family protein [Brucella suis bv. 3 str.
           686]
          Length = 314

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/396 (12%), Positives = 114/396 (28%), Gaps = 85/396 (21%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M+LL +I  +  +  +            GE +    +   +      ++   V+ G ++ 
Sbjct: 1   MSLLCVIPFVSSLFAACGTQSLAVGYVEGEFVQLAPLQVAQ------VRDIAVKRGDRVE 54

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P+ T ED +                  I   ++       +  +       R E++ 
Sbjct: 55  AGEPIATVEDTD----------------ARIAVAQAEAALAQAQAQLANLQVGKRPEEIA 98

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                                    LE      RA     Q+ L
Sbjct: 99  V----------------------------------------LEAAVRSARAQADDAQRTL 118

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++L  +   +Q  L+     +  +   + ++       +  +    +E         
Sbjct: 119 LRTRDLARRGVATQAQLDDAATQLEVAEAAIGQSTANL--AVGKLPARPEEIKA------ 170

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                     +       ++L   +  R Q+TI +P AG I      +  + A  S P++
Sbjct: 171 ---------AENAVKSAKAQLQTAKWQRAQRTIEAPAAGRITDV-VRNPGDIAGPSAPVL 220

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++P      ++  +  ++   V  G         + D      +A +  + P       
Sbjct: 221 TMLP-DGAVKLKVYIPEERFSDVAVGSV----LSVHCDGCAPGLQARVSYVSPDPEFTPP 275

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + + E  + ++ + +    D    L+ G   +V  
Sbjct: 276 VIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 311


>gi|148241904|ref|YP_001227061.1| membrane-fusion protein [Synechococcus sp. RCC307]
 gi|147850214|emb|CAK27708.1| Membrane-fusion protein [Synechococcus sp. RCC307]
          Length = 447

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/371 (13%), Positives = 121/371 (32%), Gaps = 67/371 (18%)

Query: 23  LSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           + + G+ G L+ W++  P+   V   G ++       + +   G +    VE G ++ QG
Sbjct: 35  VCLTGVTGVLVLWALFWPVPTEVKGQGVLIFPSKAGLLNARAQGQVLAVNVEVGDRVKQG 94

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L++         + + +  +   R ++                     E+   +L + 
Sbjct: 95  QELMSL-------YLPVLERELAQQRGNLLQ------------------LEAINRELNER 129

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             +   T     +  ++     L  + +R+++ Y N+L+     S  R +++   +++  
Sbjct: 130 DARRLETEKAAVDVALAKFDDDLD-RYSRLQATYGNKLNNLEWLSS-RQVVAPLSREVVS 187

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +      +VS +D+  Q + V  +                            +     +
Sbjct: 188 AEQGLTNTSVSLDDVTIQRKRVLTA----------------------------YQQVKLD 219

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQK-TILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           I  +  + Q    D   K+++ E        +++   G ++  Q        + S  L  
Sbjct: 220 IETEALERQFAIGDLKRKISVTEAQIAYDGKVMAGRDGVMIDLQVI-PGQTVKVSDRLGT 278

Query: 321 IVPHSK-------LTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDP 372
           I+  S+            A   P   + +  G    V  P +    R       +  +  
Sbjct: 279 ILGSSEAGESKAPQLNAVAYFKPADARRLPLGLPVEV-VPDWQQRGRFGGIVGKVTSVLT 337

Query: 373 IISQQDNNLQT 383
           + S +D+   T
Sbjct: 338 LPSTEDDVSTT 348


>gi|332831350|ref|XP_520008.3| PREDICTED: LOW QUALITY PROTEIN: plectin [Pan troglodytes]
          Length = 4684

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 59/199 (29%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1480 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1539

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++    +    +  +++ K+    A   S  +    ++       
Sbjct: 1540 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR------- 1592

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1593 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1651

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1652 AELASRVKAEAEAAREKQR 1670



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 73/226 (32%), Gaps = 11/226 (4%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET    +L    ++ L+          +    +  V E+ F  R  
Sbjct: 2320 QVEQELTTLRLQLEETDHQKNLLDEELQRLKAEAT------EAARQRSQVEEQLFSVRVQ 2373

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2374 MEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQL 2433

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++DL   + L EK    +    Q+   +      L++     +   R + E  ++   +
Sbjct: 2434 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQ 2493

Query: 255  FANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             A   +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2494 LAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2539



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++        +  ++ LR   + E   +     + +  E++    EE++     +  +T 
Sbjct: 1546 VDAQQQKRSIQEELQQLRQSSEAE---IQAKARQAEAAERSRLRIEEEIRVVRLQLEATE 1602

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +            L+    R       +   + ++  LR  +    +     +      
Sbjct: 1603 RQ-----RGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELASR 1657

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQ 268
              ++ +  ++++   ++  ELR    E +  LR    E   +  +      +    +L+ 
Sbjct: 1658 VKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQS 1717

Query: 269  NQRTFADEMSKLT 281
             + +FA++ ++L 
Sbjct: 1718 KRASFAEKTAQLE 1730



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2369 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2428

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2429 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2488

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2489 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2548

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2549 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2579



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/231 (11%), Positives = 76/231 (32%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK---YDVLEK 129
             +G ++ +          +  + I   ++ +   +  ++   S       +     V+++
Sbjct: 1397 RHGERVEECQSFAK----QYINAIKDYELQLVTYKAQLEPVASPAKKPKVQSGSESVIQE 1452

Query: 130  AFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
              + R    +L     +Y    S+           + + +      +      LE +  L
Sbjct: 1453 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1512

Query: 188  LRA---LLSSHQKDLTMMKNLFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNM 240
              A     +  +++   ++   ++  V +     D  QQ+R + +   +LR++   +   
Sbjct: 1513 AEAHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQA 1572

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + L     ++ +   LE  +R       +L  L    E+  
Sbjct: 1573 KARQAEAAERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAE 1623



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1777 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1836

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1837 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1893

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1894 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1945

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1946 LAEEAKRQRQLAEED 1960



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 67/213 (31%), Gaps = 14/213 (6%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSA-LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            ++ +  + V ++     + T  S  + F++     +E+     E+Q  +   +     + 
Sbjct: 1446 SESVIQEYVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAA 1505

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +      +   +         +  L +   E       A + + Q+  ++ + L +    
Sbjct: 1506 LEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQS 1565

Query: 212  SQNDLNQ-------QERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANY 258
            S+ ++          ER   +   E+R    + +   R       E         E    
Sbjct: 1566 SEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQ 1625

Query: 259  LKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             ++   + E+ +R   DE  +    E     + 
Sbjct: 1626 KRQAQEEAERLRRQVQDESQRKRQAEAELASRV 1658



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 51/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2457 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2516

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL R+  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2517 AEAERLKL-RVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2574

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E ++    + +      L+     
Sbjct: 2575 RQQSDHDAERLREAIAELEHEKEKLQQEAKLLQLKSEEMQ 2614



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1688 RLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1747

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1748 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1807

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1808 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1863

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1864 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1896



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1593 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1646

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1647 KRQAEAE--LASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1704

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1705 ETAQRSA--EAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1762

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1763 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1794



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 63/204 (30%), Gaps = 12/204 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E T L    ++++K      +  +   +    +   LE       EQ            +
Sbjct: 1981 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLE-------EQAAQHKADIEERLA 2033

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYL---NRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            ++     S + R   +    +R         L L+       A  +  + +L  +++  E
Sbjct: 2034 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAE 2093

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                S+     +     +   E  +   E +  ++      +EA  +    L+E+ R   
Sbjct: 2094 DTLRSKEQAELEAARQRQLAAEEEQRRREAEERVQKSLAAEEEAARQRKAALEEVERLKA 2153

Query: 268  --QNQRTFADEMSKLTILEKTREQ 289
              +  R   +   + +  +    Q
Sbjct: 2154 KVEEARRLRERAEQESARQLQLAQ 2177


>gi|307719611|ref|YP_003875143.1| efflux transporter, RND family, MFP subunit [Spirochaeta
           thermophila DSM 6192]
 gi|306533336|gb|ADN02870.1| efflux transporter, RND family, MFP subunit [Spirochaeta
           thermophila DSM 6192]
          Length = 421

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/378 (11%), Positives = 104/378 (27%), Gaps = 87/378 (23%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V++ GEI  ++ +  + +  SG++K   VE G ++ +G  L+  +  E    +   +   
Sbjct: 48  VAARGEIRAKEEMQVV-AQASGVVKDVLVEEGERVRKGEILVRLDTSEVEGALLQAEAQR 106

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                 +  E   +  L   Y     A E   + L                  +  ++  
Sbjct: 107 AAAELAVRRE---VVNLRIAYRDASTALEEARKNL----------------ERVRELHGI 147

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                  +R           + +  R  L+  +                  ++     +V
Sbjct: 148 GSASDEELRQAEDQVARAGEQLAAARQQLNLREGREPD---------APVPEVLPPVDLV 198

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             S+ E+R+   +       +                                       
Sbjct: 199 VASSPEVRQAEAQLAAAREQV--------------------------------------- 219

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               E+  + + I G +                P+ ++        + A+V    +  V+
Sbjct: 220 ----ERYVVRAGITGVVSRVLV-KRGAVVAAGTPVAQLH-DDSQLEVVAQVDEVDLPKVR 273

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           +G  A VR        +++ +  +  I P++ Q            V +++ +       +
Sbjct: 274 EG--ARVRVEA-DVAPDRELEGEVVWISPVLEQTGEGRMA----RVRIRLDE----REGV 322

Query: 404 ELRNGFPAEVLFTAKNTT 421
            +  G    V       T
Sbjct: 323 WI--GASCSVFIEGDRRT 338


>gi|218247375|ref|YP_002372746.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 8801]
 gi|218167853|gb|ACK66590.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           8801]
          Length = 421

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 71/230 (30%), Gaps = 31/230 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +    +S     L  + + +        +  +     +  L   + D   ++ LFE+ A+
Sbjct: 107 LLQAVLSQAEAELATQASEVIQAQGEVNEALSAVESAKVQLEQAKIDADRLRQLFEQGAI 166

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++ ++                   E  +      +    +     N  K     +   Q 
Sbjct: 167 AKREV-------------------ELADTQYRTAKQVLVSAQSQVNVRK---SAVAVAQG 204

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               + S +   ++     ++ SPI+G ++  +     N  Q      +IV     + ++
Sbjct: 205 RVNAQKSLIKQEQERLSYSSLASPISGYVLQ-RVLEPGNLVQPGS---EIVRLGDFSQVK 260

Query: 332 AKVTPKQIQ--HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
             V   ++   ++K G +  VR   +           ++ I P       
Sbjct: 261 VVVPVTELALANIKVGQSVKVRLDAFPRD---SVGGRVQNISPAADPTAR 307



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/181 (9%), Positives = 67/181 (37%), Gaps = 18/181 (9%)

Query: 37  LLPIEISVSSSG----EILNEDNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTF 87
              ++++++  G     +        ++     S   G +    V+ G ++ +G PL+  
Sbjct: 44  TAAVDVAIARRGSMAEVVEYIGTTQPVQEVSLRSQVQGQLLNLTVDVGDRVTKGQPLVQL 103

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           ++     ++   +  +            A + +  + +V E        ++     K  +
Sbjct: 104 DNSLLQAVLSQAEAELAT---------QASEVIQAQGEVNEALSAVESAKVQLEQAKIDA 154

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              +      +   R +++  T+ R+     +  +++ ++ ++ ++  Q  +   K+L +
Sbjct: 155 DRLRQLFEQGAIAKREVELADTQYRTAKQVLVSAQSQVNVRKSAVAVAQGRVNAQKSLIK 214

Query: 208 K 208
           +
Sbjct: 215 Q 215


>gi|126664701|ref|ZP_01735685.1| Secretion protein HlyD [Marinobacter sp. ELB17]
 gi|126631027|gb|EBA01641.1| Secretion protein HlyD [Marinobacter sp. ELB17]
          Length = 375

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 88/298 (29%), Gaps = 42/298 (14%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI-YLNRLDLENKSSLLRALLSSH 195
           Q      +            + S        +  + SI  +N +D+ N+   +   ++  
Sbjct: 28  QFGQMQEQMSQPQPPAEISVVQSQTEQWTPTVKAVGSIVAVNGIDVANEVPGVIQQINFE 87

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             DL           VS+ D+        +    + E     +     +     +   + 
Sbjct: 88  SGDL-----------VSKGDVL------IRLDAAIEEAALRTRGAEAQLARQEFQRIADL 130

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                      +Q +  +    +++   E    +K I +P  GT +  +      Y    
Sbjct: 131 LPKRAVSQSQYDQAKANYDAANARVNEAEAQLSKKVIRAPFDGT-LGIRLVDQGQYIGTG 189

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            P+++I       Y    ++ K +  V  GY+         +    +FK  +  I+  ++
Sbjct: 190 TPIVEIN-MLDPIYADYTLSEKNLPDVAVGYSVVATVAAAPNT---EFKGTVSAINTSVN 245

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF--------PAEVLFTAKNTTLAQE 425
               +        V ++ T    ++ +  LR G         P ++       T    
Sbjct: 246 ADTRS--------VRIRAT---LANRDQRLRPGMFATVNTRQPDDITVVTVPRTAISY 292



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 46/118 (38%), Gaps = 7/118 (5%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +V + G I+   N +++ +   G+I++   E+G  + +G  L+  +       I+   + 
Sbjct: 58  TVKAVGSIVAV-NGIDVANEVPGVIQQINFESGDLVSKGDVLIRLD-----AAIEEAALR 111

Query: 103 IKNLRCHIDT-EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            +     +   E   +  L  K  V +  ++  +        + +   +++    I +
Sbjct: 112 TRGAEAQLARQEFQRIADLLPKRAVSQSQYDQAKANYDAANARVNEAEAQLSKKVIRA 169


>gi|15602862|ref|NP_245934.1| hypothetical protein PM0997 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721325|gb|AAK03081.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 375

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 83/199 (41%), Gaps = 14/199 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +I   I+  +++SG +  ++ V EI S  SG +K+  V+ G ++ +G  L   +      
Sbjct: 35  AIRSDIQKVITASGILQAKEEV-EIGSQASGQVKQIVVQEGQRVKKGDLLALIDPRIAET 93

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDF----------LNNKYDVLEKAFESREEQLLDFLGK 144
            + L K  +++   +++ +++ L            LN K    +K  E  E + +    +
Sbjct: 94  ELKLAKAELESAEANLEVKRANLVLSEVNLARHYQLNKKEATTKKDIEEAENKRIIASAE 153

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIY---LNRLDLENKSSLLRALLSSHQKDLTM 201
                S+V +  +     S ++  T +RS     +  +  ++  +L  +  +     L +
Sbjct: 154 LRMAQSQVESAKVKVEKASTELGYTEIRSPLDGVVISVVAQSGQTLAASQQTPVLMKLAV 213

Query: 202 MKNLFEKNAVSQNDLNQQE 220
           +  +     VS+ D+   +
Sbjct: 214 IDTMKVNARVSEADVIDLQ 232



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 79/273 (28%), Gaps = 35/273 (12%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +     +  + +      + +     K   L AL+     +  +      K A ++ + 
Sbjct: 51  QAKEEVEIGSQASGQVKQIVVQEGQRVKKGDLLALIDPRIAETEL------KLAKAELES 104

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            +    V ++ L L E    +   L        +   E  N     S +L   Q      
Sbjct: 105 AEANLEVKRANLVLSEVNLARHYQLNKKEATTKKDIEEAENKRIIASAELRMAQSQVESA 164

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP---------LMKIVPHSKL 327
             K+           I SP+ G ++          AQ  Q          LMK+      
Sbjct: 165 KVKVEKASTELGYTEIRSPLDGVVISV-------VAQSGQTLAASQQTPVLMKLA-VIDT 216

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + A+V+   +  ++ G             +     A I K+ P+   +        YY
Sbjct: 217 MKVNARVSEADVIDLQVGVPVHFTLLGAPHAQFHAKLAAI-KLSPVKVSE------ATYY 269

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               ++      + + +LR    AEV       
Sbjct: 270 YATFEVP-----NPDHKLRIAMTAEVSILLDKR 297


>gi|326410635|gb|ADZ67699.1| Secretion protein HlyD [Brucella melitensis M28]
 gi|326553927|gb|ADZ88566.1| Secretion protein HlyD [Brucella melitensis M5-90]
          Length = 353

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 87/280 (31%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 81  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 140

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++        +    + +       +       D+A    A   +++   +   + 
Sbjct: 141 NTVRVDALLPRGVTT----QSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 196

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y    + L+ +VP  K  
Sbjct: 197 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGKQLVSLVPAVK-- 253

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 254 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 310

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 311 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 350


>gi|325145208|gb|EGC67489.1| fatty acid resistance protein A [Neisseria meningitidis M01-240013]
          Length = 390

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 109 NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 168

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 169 AVSQAQAAVKAALAEESSARAALGGDVSLRE-----------------QPAVQTAIGRLK 211

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 212 DAWLNLQRTQIRAPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 269

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 270 MKIGQPAEL 278



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 53/161 (32%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 60  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 119

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 120 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 179

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+     + L  + ++  A+       L + + 
Sbjct: 180 ALAEESSARAALGGDVSLREQPAVQTAIGRLKDAWLNLQRT 220


>gi|313205155|ref|YP_004043812.1| efflux transporter, rnd family, mfp subunit [Paludibacter
           propionicigenes WB4]
 gi|312444471|gb|ADQ80827.1| efflux transporter, RND family, MFP subunit [Paludibacter
           propionicigenes WB4]
          Length = 404

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 81/223 (36%), Gaps = 23/223 (10%)

Query: 206 FEKNAV-SQNDLNQQERIVYKSTLELRENIHE---QKNMLRHINELYDEANLEFANYL-K 260
            +K  + ++ D    +       L L  +  +   Q+   +   EL+D+  +   +Y   
Sbjct: 82  VKKGQILAELDKTNLQADYNSQQLNLNSSKTQYEFQQTNFKRSKELHDKNMISDIDYETA 141

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QP 317
           + + +L ++        S L   +      TI SPI G I+  ++         S     
Sbjct: 142 KYNYELAESTYKLNQ--SNLRKSQTNLNYATIHSPIDGVILS-RAVEEGQTVAASFSTPT 198

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L  I        + A V    I ++K G   +     Y + +   F+  + ++  + S  
Sbjct: 199 LFTIAKDLTKMQVVANVDEADIGNIKNGQRVSFLVDAYPNDQ---FEGEVTQV-RLKSTV 254

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +N+ T   Y+VI+        + N++L+ G  A +       
Sbjct: 255 TSNVVT---YQVIVNAP-----NENLKLKPGLTANITIYTVEK 289



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 27/62 (43%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGII K  V+  S + +G  L   +        + +++++ + +   + +++        
Sbjct: 68  SGIISKIYVDYNSPVKKGQILAELDKTNLQADYNSQQLNLNSSKTQYEFQQTNFKRSKEL 127

Query: 124 YD 125
           +D
Sbjct: 128 HD 129


>gi|220914842|ref|YP_002490150.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           nodulans ORS 2060]
 gi|219952593|gb|ACL62983.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           nodulans ORS 2060]
          Length = 486

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 62/174 (35%), Gaps = 20/174 (11%)

Query: 250 EANLEFANYLK----EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E N   A YL     E +R   +N     + + ++    K     T  SP  G +V    
Sbjct: 240 EINAAAAQYLSAIGYEGARRRLENLAIPPEVIDEIERTRKVPAAITWTSPRDGVVVERNV 299

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            S    AQ    L +IV      ++ A V  + +  V +G  A VR   + D     F  
Sbjct: 300 -SDGMRAQAGAVLFRIV-DHSRVWVLADVPERDLAAVAEGQRAIVRARAFPDR---AFTG 354

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + +I P +S               L+I      + N +LR    A+V  T  +
Sbjct: 355 TVTRIYPHLSTGTRT--------ARLRI---ELPNPNGDLRPAMYADVEITTGS 397



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 36/97 (37%), Gaps = 7/97 (7%)

Query: 40  IEISVSSSGEILNEDNVV-EIKSPFSGIIKKFQ-VENGSQILQGTPLLTFEDIETTDLID 97
           +   V + G +  ++  V  I +     ++  + V  G  + +G PLL     E      
Sbjct: 187 LSQPVRAPGTVEEDERRVSVIATRTDAFVETVESVTTGDHVHKGQPLLRLFSPEINAAAA 246

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
               +I       +  +  L+ L    +V+++   +R
Sbjct: 247 QYLSAIG-----YEGARRRLENLAIPPEVIDEIERTR 278


>gi|149189365|ref|ZP_01867650.1| hypothetical secretion protein [Vibrio shilonii AK1]
 gi|148836723|gb|EDL53675.1| hypothetical secretion protein [Vibrio shilonii AK1]
          Length = 384

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/241 (10%), Positives = 73/241 (30%), Gaps = 24/241 (9%)

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            + +  QL+       +     +   +    + L++    + +        + + +    
Sbjct: 87  IQVKPNQLVSEGDTLIALNPVDYEIAVQKAEQDLEIAGQNVGAQTATIASAQARLTSSIV 146

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + +     +  + EK  +S ++ ++    + ++   ++    +     + +    +E
Sbjct: 147 ERDNVELQTRRVLTMAEKGVISASEADKARANLARARANVQNAQADLDKANKQLGAEGEE 206

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                                     +  L   +   E+  + +P  G +  N S S   
Sbjct: 207 N-------------------SQIKAALLALEKAQLDLERTVVRAPTNGGV-SNFSLSEGF 246

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           YA   QP+M  V  +   +I A      + +++ G    +          K     I  +
Sbjct: 247 YASAGQPIMTFV-STDSIWIEAYFRENSLGNIQPGNEVEI---ALDFAPGKVITGKISSV 302

Query: 371 D 371
           D
Sbjct: 303 D 303



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 74/210 (35%), Gaps = 10/210 (4%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
             +N ++     +K++T   ++ I+  +  SI+   +  + S+     +  VV IK   S
Sbjct: 24  AEQNAEQAKQNKVKKVTNALVVFIVASLAISIIS--DRIIPSTDNARVKGYVVPIKPQVS 81

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-------NLRCHIDTEKSAL 117
           G +   QV+    + +G  L+    ++    +   +  ++            I + ++ L
Sbjct: 82  GQVIDIQVKPNQLVSEGDTLIALNPVDYEIAVQKAEQDLEIAGQNVGAQTATIASAQARL 141

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                + D +E     R   + +      S   K       +       +    ++    
Sbjct: 142 TSSIVERDNVELQTR-RVLTMAEKGVISASEADKARANLARARANVQNAQADLDKANKQL 200

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             + E  S +  ALL+  +  L + + +  
Sbjct: 201 GAEGEENSQIKAALLALEKAQLDLERTVVR 230


>gi|153217141|ref|ZP_01950905.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124113834|gb|EAY32654.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 366

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 74/212 (34%), Gaps = 23/212 (10%)

Query: 209 NAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +++ ++ + + +     + L    +   + +     +     E N   A   K +  +
Sbjct: 91  GRIAEVEIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALKNKGLQGE 150

Query: 266 LE--QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           +          D  S L+ +++  +   + +P  G +         ++     P+  I+ 
Sbjct: 151 VAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPI-EKGDFVGIGDPVASII- 208

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 I A V+ + IQHV+    A +RF     I   + +  +  I  + S   N    
Sbjct: 209 DLHKLVIEADVSERHIQHVQLEQAARIRF-----IDGTQTQGKVRYISRLSSPATNT--- 260

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              + + +++ +   +     +  G  AEV  
Sbjct: 261 ---FAIEVEVDNPQQA-----IPAGVSAEVEL 284



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I + ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIQLYGRTAPDRQAK-IGAEIAGRIAEVEIAKGQMVTKNQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 127 AQLKVRQ----QEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 183 FDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLEQAA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGTQTQGKVRYISRL 253


>gi|120597603|ref|YP_962177.1| RND family efflux transporter MFP subunit [Shewanella sp. W3-18-1]
 gi|146294258|ref|YP_001184682.1| RND family efflux transporter MFP subunit [Shewanella putrefaciens
           CN-32]
 gi|120557696|gb|ABM23623.1| efflux transporter, RND family, MFP subunit [Shewanella sp.
           W3-18-1]
 gi|145565948|gb|ABP76883.1| efflux transporter, RND family, MFP subunit [Shewanella
           putrefaciens CN-32]
          Length = 416

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 94/279 (33%), Gaps = 26/279 (9%)

Query: 152 VFNYGISSVYR-SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + N  + ++ + S+  +++        +   E K   L A + S  +  T+ + L     
Sbjct: 51  LANGTLQALKQVSVGAQVSGQIDSLFVQSGDEVKQGDLIAQIDSLAQQNTIKEALASLKI 110

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           ++      ++  + ++ LE      +           Y+ A      Y  EI +   + Q
Sbjct: 111 IN-AQYRAKQAQIQQAKLEFVRQ-QQMLADNASSRASYEAAEATLTVYQAEIEQ--LEAQ 166

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLT 328
           +  A+   K+   +       I +P+ GT+VY+           +Q    IV        
Sbjct: 167 KQQAEI--KVDSAKIDLGYTKITAPMDGTVVYSAV-EVGQTVNANQTTPTIVEMAQLDTM 223

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNN 380
            ++A+++   I +VK G      F          + A I  I+P          S   ++
Sbjct: 224 TVKAEISEADIINVKPGQAVY--FTILGQPNRP-YHATIRAIEPGPTSMESSSSSSSSSS 280

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                YY  +  +      + +  LR G   ++      
Sbjct: 281 TTEAIYYYGLFDV-----KNPDRTLRIGMTTQISIVLAK 314



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 56/148 (37%), Gaps = 11/148 (7%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            +  IE +V ++G +     V  + +  SG I    V++G ++ QG  +   + +   + 
Sbjct: 42  YIGDIESTVLANGTLQALKQV-SVGAQVSGQIDSLFVQSGDEVKQGDLIAQIDSLAQQNT 100

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           I     S+K +      +++ +          +  F  +++ L D      S  +     
Sbjct: 101 IKEALASLKIINAQYRAKQAQI-------QQAKLEFVRQQQMLADNASSRASYEA---AE 150

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              +VY++   +L   +     ++D   
Sbjct: 151 ATLTVYQAEIEQLEAQKQQAEIKVDSAK 178


>gi|308388529|gb|ADO30849.1| multidrug resistance translocase [Neisseria meningitidis alpha710]
          Length = 394

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 63/189 (33%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 113 NELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 172

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 173 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 215

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +P  G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 216 DAWLNLQRTQIRTPADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 273

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 274 MKIGQPAEL 282



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/161 (11%), Positives = 54/161 (33%), Gaps = 8/161 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 64  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELIQAVRQNR 123

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 124 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 183

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +  R+    ++ L  + ++  A+       L + + 
Sbjct: 184 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRT 224


>gi|326791723|ref|YP_004309544.1| secretion protein HlyD [Clostridium lentocellum DSM 5427]
 gi|326542487|gb|ADZ84346.1| secretion protein HlyD family protein [Clostridium lentocellum DSM
           5427]
          Length = 455

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/353 (12%), Positives = 116/353 (32%), Gaps = 60/353 (16%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +   + G  + +G  L T +  +       K      L    +     +     +
Sbjct: 79  SGQVIEVFKQEGEFVEKGEALCTVQKGDYETEASNKAFQETELTIAYERLARQIASKEEE 138

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              LE ++E                                      ++   L + +  +
Sbjct: 139 VAQLEISYE--------------------------------------IKQKELEQYETSS 160

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K   L+  +   +K + + + L ++  ++ +    ++  +       R  + E K     
Sbjct: 161 KLIDLKEQIKEQRKLVQVNEELHKEGLIAISSYEAEKNKLATLE---RSLVDEAKA---- 213

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I     ++  +  N L E++  LE  +        K  ++ ++   +T++SP+ G +   
Sbjct: 214 IETALKQSMQDIQNQLAEVTLSLEDLKEEQFLNKQKQQLINQSSLSETLVSPMEGYVYRL 273

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +   Y Q  + L+ ++P +    +  +V+ +    ++ G    V F  +  +R +  
Sbjct: 274 NV-AKGAYVQTGEQLLVVIPKALNYGLSFEVSEETANKIQMGQ--RVSFT-FNQMRYEA- 328

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 I+    +++N       Y +  ++ +       +E        V  T
Sbjct: 329 -----SINKKKFKEENGQ-----YVMTAEVEEQLLKQMQLEPTTYKTVSVEIT 371


>gi|328541889|ref|YP_004301998.1| Efflux transporter RND family, MFP subunit [polymorphum gilvum
           SL003B-26A1]
 gi|326411640|gb|ADZ68703.1| Efflux transporter, RND family, MFP subunit [Polymorphum gilvum
           SL003B-26A1]
          Length = 356

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 79/228 (34%), Gaps = 39/228 (17%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY------------ 258
           VS+ DL      V     ++ E I + +  +R  +E   +A  +   +            
Sbjct: 82  VSRGDLL-----VRIDQTDIDEAIQQAQAGVRAADEDLQDAEFDVQKFEGLARSGSVSTE 136

Query: 259 -LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L++    ++  + T     S L   E  ++  TI SP+ G +V     S    A     
Sbjct: 137 TLRKAKVRVDVARATLDGARSTLAAAEAQKDYATITSPVDGVVVSVARRS-GEMATAGST 195

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKKFKAIIEKIDPIISQ 376
           ++  V   ++   +A V+   +  +      T+R     + +   + + I+   D +  +
Sbjct: 196 ILT-VESREVLLFKAFVSEGNLAAIDPNTPVTIRIDALDNAKFTGRIRGIVPSGDDVTRR 254

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGF--PAEVLFTAKNTTL 422
                     YE+ +          +  L  G    AE++   + + L
Sbjct: 255 ----------YEINV------ILPKDQRLLPGMFGRAEIILGTQKSVL 286



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 59/177 (33%), Gaps = 11/177 (6%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            SV S G I     VV       G I++  V  G ++ +G  L+  +  +  + I   + 
Sbjct: 53  GSVISDGRIEVSSRVV-------GFIEQLDVREGQKVSRGDLLVRIDQTDIDEAIQQAQA 105

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            ++      D +    +F   K++ L ++     E L     +     + +     +   
Sbjct: 106 GVRA----ADEDLQDAEFDVQKFEGLARSGSVSTETLRKAKVRVDVARATLDGARSTLAA 161

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
              +     + S     +    + S   A   S    +   + L  K  VS+ +L  
Sbjct: 162 AEAQKDYATITSPVDGVVVSVARRSGEMATAGSTILTVESREVLLFKAFVSEGNLAA 218


>gi|148652465|ref|YP_001279558.1| secretion protein HlyD family protein [Psychrobacter sp. PRwf-1]
 gi|148571549|gb|ABQ93608.1| secretion protein HlyD family protein [Psychrobacter sp. PRwf-1]
          Length = 357

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 56/422 (13%), Positives = 116/422 (27%), Gaps = 85/422 (20%)

Query: 1   MHHFMWKNLKRNHPASLKRMTL-LSIIGIIGLITW----SILLPIEISVSSSGEILNEDN 55
           M        K+  P  L+ + + L + GII LI +    S     E  +   G++  E  
Sbjct: 1   MSTSNTSPSKKPSPTMLRNIIITLVVAGIIALIIYGLNKSSQSN-EKPIVVQGQM--EMQ 57

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
              I +   G I K  V  G  +  G  L+  +  E T  ++    +    +  +D  ++
Sbjct: 58  STAIAAKVPGRIAKILVTEGDNVTAGQQLIEMDSPEITAKMNQALAARDMAQSQLDKAQN 117

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                        +  E  + +      +  +  +K     ++ +Y    M   +    Y
Sbjct: 118 GA-----------RPQEIGQAKAAWQANQAAADLAKSTYERVNRLYEEGLMARQKRDEAY 166

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
              +  ++K+   R                              E    +     +  + 
Sbjct: 167 TQYVANQDKADAARLQYD-----------------------LAVEGAREEDKAGAKAQVA 203

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           +    +       +EANL+                                       SP
Sbjct: 204 QVDGKIEEAQAAQNEANLK---------------------------------------SP 224

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           IAG +             Q  P+M +V  ++   +   VT   +     G     + P  
Sbjct: 225 IAGIVDDVIVN-PGEVIGQGVPIMTLVDPNQQWVV-LNVTENLLNQFSIGTQFVGQVPAL 282

Query: 356 ADIREK-KFKAIIEKIDPIISQQD-NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +      K    +     +          T++ ++V            + ++R+G    V
Sbjct: 283 SRPDAPYKMTFKVFNTAALSDFATWRATNTEDNFDVRTFEVKARPVTADPKIRSGMSVVV 342

Query: 414 LF 415
             
Sbjct: 343 EL 344


>gi|167589250|ref|ZP_02381638.1| MFS efflux system, membrane fusion protein, EmrA subfamily
           [Burkholderia ubonensis Bu]
          Length = 410

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/273 (12%), Positives = 77/273 (28%), Gaps = 28/273 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L   +   R+ + +    E +  L R+  S    DL    +L +   VS+
Sbjct: 97  QLALDEAVAQLAHAVRAYRTAHADAAGEEARIRLRRSEWSRASDDLQRRLSLAQDGGVSR 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            D+      +  +   L          L   +    +AN                     
Sbjct: 157 EDIRHARDAMDSAAAALSAQQSVYDASLARTDGTSIDAN------------------PLV 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           +   +++        +  I +P+ G +   +      +     P M +VP     ++ A 
Sbjct: 199 SAAAARVRSCALALRRTEIRAPLGGLVTR-RVVQVGQHVAPGTPSMALVPLDH-VWVEAN 256

Query: 334 VTPKQIQHVKKGYTATVRFPHY--ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE--- 388
               Q++ ++ G    +R   Y    +   +   I        +       T  + +   
Sbjct: 257 FKESQLRGMRVGQPVELRADLYGGDVVFHGRLVGIEAGTGAAFASVPAQNATGNWIKVVQ 316

Query: 389 ---VILKITDLAFSDNNIELRNGFPAEVLFTAK 418
              V + +       + + +     A V   + 
Sbjct: 317 RVPVRISLDPAELRAHPLRIGLSMTASVPVDSG 349



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 49/151 (32%), Gaps = 6/151 (3%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L++   IG++ W+          ++ +     +VV+I     G +    V+N   +  G 
Sbjct: 31  LAVAAGIGVVFWAT----ARGTETTDDAYVAGDVVQISPQIGGTVDAVMVQNADWVRPGD 86

Query: 83  PLLTFEDIETTDLIDLKKVSIK-NLRCHIDTEKSAL-DFLNNKYDVLEKAFESREEQLLD 140
            L   +  +    +D     +   +R +      A  +    +    E +  S + Q   
Sbjct: 87  LLFRVDKTDAQLALDEAVAQLAHAVRAYRTAHADAAGEEARIRLRRSEWSRASDDLQRRL 146

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            L +      +   +   ++  +      + 
Sbjct: 147 SLAQDGGVSREDIRHARDAMDSAAAALSAQQ 177


>gi|197122694|ref|YP_002134645.1| secretion protein HlyD [Anaeromyxobacter sp. K]
 gi|196172543|gb|ACG73516.1| secretion protein HlyD family protein [Anaeromyxobacter sp. K]
          Length = 348

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 69/225 (30%), Gaps = 24/225 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++  + + E    K+ L+LR    E K       E YD   +  A        +  Q  
Sbjct: 131 VARAGVTRAEAESEKAALDLRRA-EELKAGDAIAAERYDATRIAGATARAGAGANRAQYA 189

Query: 271 RTFAD----------EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
              A             + + +         + +P +G +    +       Q  Q L +
Sbjct: 190 AALASGELATARVKAAQAAVDLARLQLSYTEVRAPASGRVSRLAAR-VGQIVQPGQGLGQ 248

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ--- 377
           +VP    TY+ A     Q   ++ G    V    Y           +E I      +   
Sbjct: 249 LVP--DRTYVIANFKETQTGEIRPGQPVDVEIDAYGGRT---LHGKVESISGGTGARFAL 303

Query: 378 -DNNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLFTAK 418
              +  +  + +V+ ++           ++ LR G  A V    +
Sbjct: 304 LPPDNASGNFVKVVERVPVRIAWDAVPADLPLRAGLSAFVTVHTR 348



 Score = 40.0 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 23/219 (10%), Positives = 64/219 (29%), Gaps = 10/219 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E +VV +    +G + +  V + +Q+ QG PL+  +  +    + +++   +       
Sbjct: 64  VEADVVAVAPRVAGPVAEVLVADNAQVRQGQPLVRVDPADY--QVRVRQAEAELATAQAQ 121

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              +       +  V     ES +  L     +       +      +   +        
Sbjct: 122 AAAAEAQVSVARAGVTRAEAESEKAALDLRRAEELKAGDAIAAERYDATRIAGATARAGA 181

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +             L  A + + Q  + + +         Q    +           L 
Sbjct: 182 GANRAQYAAALASGELATARVKAAQAAVDLARL--------QLSYTEVRAPASGRVSRLA 233

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             + +     + + +L  +     AN+ +  + ++   Q
Sbjct: 234 ARVGQIVQPGQGLGQLVPDRTYVIANFKETQTGEIRPGQ 272


>gi|256059317|ref|ZP_05449519.1| secretion protein HlyD family protein [Brucella neotomae 5K33]
          Length = 349

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 77  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 136

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++        +    + +       +       D+A    A   +++   +   + 
Sbjct: 137 NTVRVDALLPRGVTT----QSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 192

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 193 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVPAVK-- 249

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 250 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 306

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 307 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 346


>gi|255523313|ref|ZP_05390283.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|296188246|ref|ZP_06856638.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|255512967|gb|EET89237.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|296047372|gb|EFG86814.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
          Length = 462

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 64/430 (14%), Positives = 140/430 (32%), Gaps = 97/430 (22%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW------------------SILLPIEISVSSSGEI 50
           +K         + L+ I G  G   +                  +    ++I+V ++G +
Sbjct: 1   MKEKILKISAVIVLIIIAGFGGYYAYKRSTSKNVLTSTKYSLSKATKTNLDITVEATGAV 60

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
              + V    S  +G +     + G+ + +G      +D  T                  
Sbjct: 61  TGVNEVNVFSS-NTGTVDGMTAKLGAAVNKGDLFCKIDDSTT------------------ 101

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              + A+D             ++ + QL D + K         +  + +VY  +  +++ 
Sbjct: 102 ---QQAVDSAQISLQHSYLELQALKNQLDDLVVKAP------ISGKVRAVYAGVGDEVSS 152

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           ++S Y     +   S                        AV            + S+ ++
Sbjct: 153 IKSTYGGMAMITVGSDNSYET------------------AVP-----------FPSSGKV 183

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            E        +   + L+        N + +   D++  Q+  +D+ +          + 
Sbjct: 184 AEVCVSAGQSVNKGDVLFRLDAKTLNNTIAQKENDIKLAQKNLSDKQA-------NLAKS 236

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           TI +PI+G +        +     ++ L+  +  +    +   V    I  VK G TAT+
Sbjct: 237 TIATPISGIVTVLNV--KNGEIVTNEKLIATISDTSKMRVTLAVDELDINQVKVGQTATI 294

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           +     DI++K FK  +E I    +  +N       Y V++ I     +  N+++  G  
Sbjct: 295 KL---DDIKDKTFKGSVESISQSGTTTNNVTT----YSVVVTID----NPENVKI--GMN 341

Query: 411 AEVLFTAKNT 420
           A V    ++ 
Sbjct: 342 ANVSIEVQSK 351


>gi|227536224|ref|ZP_03966273.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227243927|gb|EEI93942.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 376

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 93/261 (35%), Gaps = 30/261 (11%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           YR +K +++   SI  N  D+    S+L  ++ + Q +L           V +  +    
Sbjct: 63  YRPVKEQISLTGSISYNEDDVVKFKSMLEGVVENVQFNLG--------QFVKRGQVLATV 114

Query: 221 RI--VYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADE 276
           R   V   + E +   ++     + ++      +  L  A  ++E+  +L   Q      
Sbjct: 115 RSTSVNDMSNERQSLTNQIALARQKVSSTQSMFQDGLASARQVEEVRMELATLQSALQSL 174

Query: 277 MSKLTILEKTREQK--TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
            + + +   T  +    I +P  G IV                L  +  + +  ++   +
Sbjct: 175 DANMNLYNATSHRGVFEIKAPKDGYIVEKNLN-PGANINNEDQLFALS-NLRQIWVMVNI 232

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               +Q+VK G T  V+   Y D     F   I++I  +  Q +            +   
Sbjct: 233 YANNLQYVKNGATVAVKTLAYPDEI---FTGKIQQISNVFDQDE-----------RVLKA 278

Query: 395 DLAFSDNNIELRNGFPAEVLF 415
            +   + ++ L+ G  A+V+ 
Sbjct: 279 RVLLDNADLRLKPGMSADVII 299


>gi|73539057|ref|YP_299424.1| hypothetical protein Reut_B5234 [Ralstonia eutropha JMP134]
 gi|72122394|gb|AAZ64580.1| putative membrane protein [Ralstonia eutropha JMP134]
          Length = 443

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 102/309 (33%), Gaps = 36/309 (11%)

Query: 23  LSIIGIIGLITWSILLPIEISV--SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           L+  G++  I W IL  +   V   SS   +    V  + +P  G++ +  V  G     
Sbjct: 46  LASYGMVAFIIWVILSVMFPPVFNRSSERAVVNSPVNLVTTPVEGVVTRQAVAVGGTFGA 105

Query: 81  GTPLLTFEDIETTDLIDL--------KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           G PL+T ++      + +         +  ++  R  + +++S L     +    + A +
Sbjct: 106 GQPLMTLQNSNLDRALLVDLTGKRLDNQTRLEAARAKLASDQSRLASTTQEIQRYQTAAQ 165

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
                 +  +    S   +  +     V R+  M+     S         N+ ++L    
Sbjct: 166 REHASRIKGIEAKLSVARQQIDQQEDVVNRNQAMQWAGAVSEAYTDAS-RNQLTVLAGQR 224

Query: 193 SSHQKDLTMMK--NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            + Q +L   +  +   +  V  +  +     + +   ELR +I + ++ +  + E  + 
Sbjct: 225 DAIQAELESARGSSEAARGKVYMSSADGAVGALVQRQDELRASIAQTQSEIAQLQEYGES 284

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            +                  +  A E  +L           I +  AG +V +       
Sbjct: 285 VD------------------KMVATEQERL----DRVSNLEIKA-YAGGVVEDVLAPPGT 321

Query: 311 YAQQSQPLM 319
                  LM
Sbjct: 322 RVAAGATLM 330


>gi|322419705|ref|YP_004198928.1| RND family efflux transporter MFP subunit [Geobacter sp. M18]
 gi|320126092|gb|ADW13652.1| efflux transporter, RND family, MFP subunit [Geobacter sp. M18]
          Length = 458

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 67/211 (31%), Gaps = 26/211 (12%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            ++  + +   ++            E       E        S++++  Q++  +  ++L
Sbjct: 182 AVIESAAVSGDQSRLAAARSRVQTAEASYRREAELEKKGISASKEVQAAQQSLREASAEL 241

Query: 281 TILEKTRE---------QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             L              + ++ +P++G +   ++ S + Y     PL +IV  +      
Sbjct: 242 DSLRAALRGVGATGSGGRYSVKAPVSGIVTQ-RTASLAAYVDSHTPLFEIV-DTSTMLGE 299

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             +   ++ +VK G    +           +F+  I  I P++  Q          +  +
Sbjct: 300 VAIPEAELGNVKTGMPVVIVMDALGGR---EFRGSIASIAPLVDPQTRTA------KARV 350

Query: 392 KITDLAFSDNNIELRNGFPAEVLF-TAKNTT 421
           ++      +    LR     +         T
Sbjct: 351 RLP-----NTGGMLRANMYGQARIAVGGTRT 376


>gi|291613775|ref|YP_003523932.1| secretion protein HlyD family protein [Sideroxydans lithotrophicus
           ES-1]
 gi|291583887|gb|ADE11545.1| secretion protein HlyD family protein [Sideroxydans lithotrophicus
           ES-1]
          Length = 328

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/242 (11%), Positives = 66/242 (27%), Gaps = 25/242 (10%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A   ++ Q +           + F   +      L       R             +   
Sbjct: 58  AVHIKDNQHVHKGDALFDIDPQPFTIALERAQADLAQARQNARQDNAEVAAARAMVTQAE 117

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L + +   T  K L  ++ +SQ  L+  +  +      L +   +    L    ++ +
Sbjct: 118 SDLGNARSTYTRDKELVAQHFLSQQSLDDAQTHMQALQATLEQAHAKLTKALSAPVKVGE 177

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                               +       + +       E   +++   G I      ++ 
Sbjct: 178 --------------------RGDVLKAQAAIDQARLDLEHTHVVASQDGQISNLSL-TAG 216

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           +     +PL  ++      +I A     ++  +  G    +    Y     + FK  +E 
Sbjct: 217 SLVGVGEPLFALI-ADNSFHIDANYKETELPGIHPGQDVDIEIDMYP---GQHFKGTVES 272

Query: 370 ID 371
           I 
Sbjct: 273 IS 274



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 51/152 (33%), Gaps = 5/152 (3%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           +VV + +  SG +    +++   + +G  L   +    T  ++  +  +   R +   + 
Sbjct: 44  DVVNVAAQVSGRVVAVHIKDNQHVHKGDALFDIDPQPFTIALERAQADLAQARQNARQDN 103

Query: 115 SALDFLN-----NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           + +          + D+         ++ L                 + ++  +L+    
Sbjct: 104 AEVAAARAMVTQAESDLGNARSTYTRDKELVAQHFLSQQSLDDAQTHMQALQATLEQAHA 163

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           ++       + +  +  +L+A  +  Q  L +
Sbjct: 164 KLTKALSAPVKVGERGDVLKAQAAIDQARLDL 195


>gi|261215625|ref|ZP_05929906.1| secretion protein HlyD family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260917232|gb|EEX84093.1| secretion protein HlyD family protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 321

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 59/202 (29%), Gaps = 18/202 (8%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEIS---RDLEQNQRTFADEMSKLTILEKTRE 288
           ENI    N            + + A+    IS       +   +            +   
Sbjct: 121 ENIPVAANQQVKAGARLAGVDAQIASAKANISVLEAQYNEAASSTKSLELARDKAARDLS 180

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             +  +P  G I  N S    +     Q +  +VP     YI A     Q+ H+K G TA
Sbjct: 181 FTSPRAPFDGVI-GNLSGKKGDLVAPGQKIAALVPVD-QLYIDANFKETQLAHIKVGETA 238

Query: 349 TVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSD 400
            +        +   F   +  I P           +      T+    V ++IT    + 
Sbjct: 239 HIYVDAIDGTK---FDGKVASIAPASGAVFSLLPPENATGNFTKVVQRVPVRITIPKEAF 295

Query: 401 NNIELRNGFPAEVLFTAKNTTL 422
            + ++R G    V       T 
Sbjct: 296 ESGKIRAGLSVIVDVDT--RTA 315


>gi|212635245|ref|YP_002311770.1| HlyD family secretion protein [Shewanella piezotolerans WP3]
 gi|212556729|gb|ACJ29183.1| HlyD family secretion protein [Shewanella piezotolerans WP3]
          Length = 279

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 85/237 (35%), Gaps = 22/237 (9%)

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML-RHINELYDEANL 253
            Q  ++  + + +   + + + + Q   + K+   L +  ++ K +    +  L    NL
Sbjct: 48  KQIHVSTDERVSKDQLLFELEGDDQVIALAKARAALEQGEYQLKLLQDEELRLLGIRGNL 107

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              +  ++ +  +++ Q       + L+  +   ++  I +P AG I     F+      
Sbjct: 108 VSEDEREKANTSVKEQQAEVKVLTADLSQAQLNIKRTKIYAPHAGYISALD-FTQGQVVT 166

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-- 371
             Q ++ ++  +    ++A     +I+ ++ G  A +R     DI        +  I   
Sbjct: 167 PGQQVLALIDLNS-FTVKAYFEETRIRELRSGQKARIRLMGRDDII---LNGTVISIARG 222

Query: 372 -------------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                        P + Q    ++  +   V ++  D       + L +G  A V+ 
Sbjct: 223 INNNNETKGSQQLPDVQQTFPWIRLAQRVPVTIEFDDQQRVQ-QLHLFSGSTASVVI 278


>gi|21230856|ref|NP_636773.1| multidrug resistance efflux pump [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66769145|ref|YP_243907.1| multidrug resistance efflux pump [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188992293|ref|YP_001904303.1| Membrane fusion protein [Xanthomonas campestris pv. campestris str.
           B100]
 gi|21112462|gb|AAM40697.1| multidrug resistance efflux pump [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66574477|gb|AAY49887.1| multidrug resistance efflux pump [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167734053|emb|CAP52259.1| Membrane fusion protein [Xanthomonas campestris pv. campestris]
          Length = 397

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 88/276 (31%), Gaps = 28/276 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + ++R +Y +    + + S     L S + D    K+L    A+S  +
Sbjct: 99  ALQQAEANLAKTVRQVRGLYRSVEGAQAELSAREVTLRSARADFARRKDLAASGAISNEE 158

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   +  +    +     I++                       Q     
Sbjct: 159 LAHARDELAAAEAAVSGSRESFERNRALIDDTE------------------VATQPDVQA 200

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             ++L        +  +++P++G +   +S       Q    LM +VP  +  ++ A   
Sbjct: 201 AAAQLRQAFLNHARTGVVAPVSGYVAR-RSAQVGQRVQPGTVLMAVVPP-EQMWVEANFK 258

Query: 336 PKQIQHVKKGYTATVRFPHYADIR--EKKFKAI-IEKIDPIISQQDNNLQTQ-----EYY 387
             Q++H++ G T  +    Y        + +++ +            N         +  
Sbjct: 259 ETQLKHMRLGQTVELHSDLYGGGVDYTGRIESLGLGTGSAFSLLPAQNASGNWIKIVQRV 318

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            V + I     + N + L     A+V    +  ++ 
Sbjct: 319 PVRIAIEPKQLAANPLRLGLSMKADVNLRDQQGSVL 354



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 61/175 (34%), Gaps = 4/175 (2%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L+ + +L I+ +IGL+ W  L  I      + +   + N V+I     G +     E+G 
Sbjct: 23  LRIVAILVILAVIGLVVWYFL--IGRWAEDTDDAYVQGNQVQITPMVGGTVVSIGAEDGM 80

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++ +G  L+  +  +T   +   + ++      +     +++    +    E    S   
Sbjct: 81  RVERGQLLVQLDPSDTAVALQQAEANLAKTVRQVRGLYRSVEGAQAELSAREVTLRSARA 140

Query: 137 QLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                  L    +  ++   +    +  +         S   NR  +++     +
Sbjct: 141 DFARRKDLAASGAISNEELAHARDELAAAEAAVSGSRESFERNRALIDDTEVATQ 195


>gi|254228211|ref|ZP_04921640.1| auxiliary transport protein, membrane fusion protein (MFP) family,
           putative [Vibrio sp. Ex25]
 gi|262394085|ref|YP_003285939.1| multidrug resistance efflux pump [Vibrio sp. Ex25]
 gi|151939284|gb|EDN58113.1| auxiliary transport protein, membrane fusion protein (MFP) family,
           putative [Vibrio sp. Ex25]
 gi|262337679|gb|ACY51474.1| multidrug resistance efflux pump [Vibrio sp. Ex25]
          Length = 354

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 66/220 (30%), Gaps = 10/220 (4%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S  R     IIG++  + W   L  +     +G       +V I    SG + +  V N 
Sbjct: 6   SSSRKLSFIIIGLV-FVVWLYSLWADRVTPITGTARIHSYLVRITPEVSGNLTEIHVRNN 64

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSI--------KNLRCHIDTEKSALDFLNNKYDVL 127
             +  G  L   +  +    +   + ++         N       +   ++ L  + +  
Sbjct: 65  QVVNAGDVLFEIDPRDYQINLRSAEANLAIAGQNIGANTAAVEVAQAKVIESLAARDNAK 124

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E+A    E      L K     +        +   + +  L + +           +   
Sbjct: 125 EQAARVTELAAKGVLSKSELDNAIEAKARAQATLEAAEASLAQAKHNLGPEGQDNPQILA 184

Query: 188 LRALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIVYKS 226
             A L   Q DL   K +   K  VS   L   ++    S
Sbjct: 185 AIANLEKAQLDLQRTKVIAPSKGIVSNLQLTVGQKATTGS 224



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 73/242 (30%), Gaps = 26/242 (10%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               R  Q+++          + +   + S   +L +    + +        + K     
Sbjct: 58  EIHVRNNQVVNAGDVLFEIDPRDYQINLRSAEANLAIAGQNIGANTAAVEVAQAKVIESL 117

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A   + ++    +  L  K  +S+++L+       ++   L            ++     
Sbjct: 118 AARDNAKEQAARVTELAAKGVLSKSELDNAIEAKARAQATLEAAEASLAQAKHNLGPE-- 175

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                             Q+       ++ L   +   ++  +++P  G +   Q  +  
Sbjct: 176 -----------------GQDNPQILAAIANLEKAQLDLQRTKVIAPSKGIVSNLQL-TVG 217

Query: 310 NYAQQSQPLMK-IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
             A    PL+  I P     ++ A V    ++HV+ G    +            F+  +E
Sbjct: 218 QKATTGSPLVTFIDPRG--VWVSALVRENSLEHVRAGQKTKIVLDALPGR---VFQGRVE 272

Query: 369 KI 370
            I
Sbjct: 273 SI 274


>gi|319955501|ref|YP_004166768.1| efflux transporter, rnd family, mfp subunit [Cellulophaga algicola
           DSM 14237]
 gi|319424161|gb|ADV51270.1| efflux transporter, RND family, MFP subunit [Cellulophaga algicola
           DSM 14237]
          Length = 410

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 76/216 (35%), Gaps = 18/216 (8%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQ--KNMLRHINELYDEANLEFANYLKEISR 264
           E   +++ D    +  + K      ++++++  +  +    ++  +  +   +   E   
Sbjct: 86  EGQLIAELDKTTLQSTLIKQQANYNKSVNDRNYQKTIYDRQKVLYDNQVISKSDYDEALY 145

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKI 321
           + E  + T ++  S     +       I SPI G ++  +          S     L  I
Sbjct: 146 NYEVAKNTVSETYSDYQNAKTNLSYANIYSPINGVVLS-RDVDEGQTVAASYSTPTLFTI 204

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                   + A V    I  VK+G   +     Y   + ++F+  + ++    +   N +
Sbjct: 205 AKDLTEMQVEADVDEADIGQVKEGQRVSFTVDAY---QGEEFEGTVTQVRLNPTTTSNVV 261

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                Y V++K       + +++L+ G  A +    
Sbjct: 262 T----YTVVIKAD-----NPDLKLKPGLTATISIYT 288



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           V+++G I     V ++ +  SG+++K  V+  S + +G  +   +       +  ++ 
Sbjct: 51  VTATGTIEPVKQV-DVGTQVSGVVEKIYVDYNSVVTEGQLIAELDKTTLQSTLIKQQA 107


>gi|304437940|ref|ZP_07397886.1| possible secretion protein HlyD [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369080|gb|EFM22759.1| possible secretion protein HlyD [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 339

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/330 (13%), Positives = 101/330 (30%), Gaps = 42/330 (12%)

Query: 99  KKVSIKNLRCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++ + + LR  + T   E + ++    +   +E+ F      +             +   
Sbjct: 33  REYAAQELRAQLLTGTVEATRVEVSTKESGCIEELFLQEGMTVRAGDPAARIGRRDLDAA 92

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLD----LENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +         + +  R+   NR +       +++  RA       D      L    A+
Sbjct: 93  VLRDEAALAHAETSLQRTQSGNRAEEIRAAAERTNAARAAAEKADADYARGAELIAGGAI 152

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           SQ   +        +   LR    EQ                           D+   + 
Sbjct: 153 SQQAFDGLREARDAANANLRAAQQEQALTESGSR-----------------PEDIRMAEE 195

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYI 330
               + + L I        T+  P  G ++  +++    + +   P+  ++ P     ++
Sbjct: 196 DVRRQQAILEIDASAVSDLTVRVPKDGIVLS-KNYERGEFVRAGTPIATLIDPQD--VWV 252

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----PIISQQDNNLQTQE 385
           +  V    +  ++ G  A V    Y D + +     I++I       +      N +   
Sbjct: 253 KVYVPTDVLGDLRIGDPAKV----YIDGQTEPLDGTIKEISDAAEFTLRQSITKNERANL 308

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + V + + + A       L+ G PA+V  
Sbjct: 309 VFGVKVAVDNAAGI-----LKPGMPADVDL 333



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 49/165 (29%), Gaps = 5/165 (3%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E   VE+ +  SG I++  ++ G  +  G P       +    +   + ++ +    +
Sbjct: 48  TVEATRVEVSTKESGCIEELFLQEGMTVRAGDPAARIGRRDLDAAVLRDEAALAHAETSL 107

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              +S      N+ + +  A E                          ++ +     L  
Sbjct: 108 QRTQSG-----NRAEEIRAAAERTNAARAAAEKADADYARGAELIAGGAISQQAFDGLRE 162

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            R      L    +   L    S  +      +++  + A+ + D
Sbjct: 163 ARDAANANLRAAQQEQALTESGSRPEDIRMAEEDVRRQQAILEID 207


>gi|303326489|ref|ZP_07356932.1| hypothetical protein HMPREF0326_01112 [Desulfovibrio sp. 3_1_syn3]
 gi|302864405|gb|EFL87336.1| hypothetical protein HMPREF0326_01112 [Desulfovibrio sp. 3_1_syn3]
          Length = 310

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 88/262 (33%), Gaps = 35/262 (13%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +    +  L R  +I     +L+ +       L+         + L      S+  L + 
Sbjct: 82  LQEEAERILQREVTIGAATENLKGQVLDFERQLAETTAQRNKARQLVASGLGSRQALTRL 141

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E           +++   K  +  +     +    FA+ L+E+                 
Sbjct: 142 E-----------DDVDSLKRRIELLRTTIQKTESNFASRLRELEGYYG----------VP 180

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKI-VPHSKLTYIRAKVTPK 337
           +   E+      + SPI G ++   S  +           M I V       I+  V   
Sbjct: 181 IKEGEQLPVTLVLTSPIKGYVLSLDSTLNPGTVLAAGT--MPIRVGQLNPVLIQVPVYEA 238

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           ++  +K+G TA V  P   + +   F   + +I  + +     + +  YY V L +    
Sbjct: 239 EVSGIKEGDTAEVEIPSLGNRK---FTGTVNEISWVSNDMS--VGSPSYYTVELTVP--- 290

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             + ++EL+ GF A V F+   
Sbjct: 291 --NPDLELKPGFKAVVRFSGGR 310



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 57/139 (41%), Gaps = 3/139 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
             +   +G+++       +  PF+ ++ +  V++G  + +G+PLL +   E  + I  ++
Sbjct: 35  ASTTILTGKVVTTVTR-AVPIPFNAVVDEVLVKSGDAVEKGSPLLRYHLQEEAERILQRE 93

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           V+I     ++      LDF     +   +  ++R+        +   T  +     +   
Sbjct: 94  VTIGAATENLK--GQVLDFERQLAETTAQRNKARQLVASGLGSRQALTRLEDDVDSLKRR 151

Query: 161 YRSLKMKLTRMRSIYLNRL 179
              L+  + +  S + +RL
Sbjct: 152 IELLRTTIQKTESNFASRL 170


>gi|228989097|ref|ZP_04149120.1| Bacteriocin ABC transporter [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228770626|gb|EEM19168.1| Bacteriocin ABC transporter [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 186

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 63/161 (39%), Gaps = 6/161 (3%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           TWS        V   G I+   +   I SP SG +++  VE G ++ +G  LL+ + +++
Sbjct: 17  TWSTYSIKTYVVKGQG-IVTTQDKHNIMSPVSGAVEEIHVEEGKKVKKGELLLSLKPVQS 75

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              I+     +K L   I+     L             F+ ++   L+F  K +S   K+
Sbjct: 76  NLQIEQLDDQLKYLNERIE----LLVRAQKNVSRGTNDFDKKKSSELEFYNKLNSLQVKM 131

Query: 153 FNYGISSV-YRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             + +  +   SLK +      I   +    NK    +  L
Sbjct: 132 KEFEVKKITEESLKEQNYNEEQIKDYKNKAINKMEQAKNEL 172


>gi|330448597|ref|ZP_08312245.1| efflux transporter, RND family, MFP subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328492788|dbj|GAA06742.1| efflux transporter, RND family, MFP subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 376

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 59/158 (37%), Gaps = 19/158 (12%)

Query: 18  KRMTLLSIIGIIGLITWSILLP----------------IEISVSSSGEILNEDNVVEIKS 61
           + + + ++  I  L  +++  P                IE    + G+I+    V  IKS
Sbjct: 4   RWIAIATLSAIAALGIYAVKAPSSDKHHFTMLAAKNATIEKQAIAVGQIMPAQAVK-IKS 62

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              GI+ K  V  G ++  G+P++      T    DL +V+   L+   D E + +   N
Sbjct: 63  QIEGIVDKIYVNLGDKVEAGSPVIKLRPNPTPQ--DLTRVNADLLKSKADLESAKVKQAN 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            +    +K   +  +  +       S  +++      S
Sbjct: 121 LQRLAAQKIIPANFDAYIQAQAAVKSKTAELKQKQQES 158



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 15/220 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD----EANLEFANYLKEISRDLEQN 269
            DL +    + KS  +L     +Q N+ R   +       +A ++    +K  + +L+Q 
Sbjct: 95  QDLTRVNADLLKSKADLESAKVKQANLQRLAAQKIIPANFDAYIQAQAAVKSKTAELKQK 154

Query: 270 QRTFADEMSKLTI-LEKTREQKTILSPIAGTIVYNQS-----FSSSNYAQQSQPLMKIVP 323
           Q+  +D MSK       T+    I +PI GT++  +       +S+   Q +  +M +  
Sbjct: 155 QQE-SDLMSKGESNAGSTKLTSIIYAPINGTVLDVKVDVGEPITSTESNQAATEIMTMA- 212

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQ 382
                  +  V+      + +G    +    Y D++   K   +  + + +    +NN Q
Sbjct: 213 DMNNIIFKGSVSEHDAAQLTEGMPVELTLAPYPDLKIAGKLTKVAVQSEKLNDDSNNNQQ 272

Query: 383 TQEY-YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            Q +     ++++D+ F   +I LR+GF A    T K  T
Sbjct: 273 AQSFDNGFAVEVSDIKF-PKDITLRSGFTATAHITLKKAT 311


>gi|228903085|ref|ZP_04067222.1| multidrug resistance protein A [Bacillus thuringiensis IBL 4222]
 gi|228856571|gb|EEN01094.1| multidrug resistance protein A [Bacillus thuringiensis IBL 4222]
          Length = 211

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 51  KLTDWKAEVGKNYNEN-----DKLGVVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 104

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 105 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LTGKVEQVGL 160

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 161 TTANTFSMLPSSNSTANYTKVTQVVPVKISLDHSKSVNIVPGMNVSVRIH 210


>gi|39936837|ref|NP_949113.1| RND efflux membrane fusion protein [Rhodopseudomonas palustris
           CGA009]
 gi|192292663|ref|YP_001993268.1| efflux transporter RND family, MFP subunit [Rhodopseudomonas
           palustris TIE-1]
 gi|39650694|emb|CAE29217.1| possible RND efflux membrane fusion protein precursor
           [Rhodopseudomonas palustris CGA009]
 gi|192286412|gb|ACF02793.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
           palustris TIE-1]
          Length = 397

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 63/201 (31%), Gaps = 20/201 (9%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           +Q  ++ K   E  +           + EL  +   + A         ++  Q  +    
Sbjct: 116 KQGTLLVKLFDETEQADLANYRAQAKVAELSLDRAKQLAARQFGPQATVDSAQAAYDQAN 175

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP- 336
           + +   E    QK + +P  G ++  +      Y        +IV  + L+ + A +T  
Sbjct: 176 AGIAKTEALISQKKVRAPFDG-VLGVRHVEVGQYLSAGT---QIVTLTDLSQVYANITVT 231

Query: 337 -KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            K    +  G    ++   Y       F   I  I+P IS    N++ Q           
Sbjct: 232 EKDSGTLAVGQAVRLKVDAYPGR---VFDGKITTIEPQISSDTRNIRVQ----------- 277

Query: 396 LAFSDNNIELRNGFPAEVLFT 416
               +    LR G  A  +  
Sbjct: 278 ATLDNPGHVLRPGMFATTIVV 298



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 39/128 (30%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S  SG I     + GS++ QGT L+   D      +   +   K     +D  K    
Sbjct: 96  VTSDVSGRITDILFQAGSEVKQGTLLVKLFDETEQADLANYRAQAKVAELSLDRAKQLAA 155

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   ++ A  + ++              K        V     +++ +  S     
Sbjct: 156 RQFGPQATVDSAQAAYDQANAGIAKTEALISQKKVRAPFDGVLGVRHVEVGQYLSAGTQI 215

Query: 179 LDLENKSS 186
           + L + S 
Sbjct: 216 VTLTDLSQ 223


>gi|238749851|ref|ZP_04611355.1| hypothetical protein yrohd0001_36180 [Yersinia rohdei ATCC 43380]
 gi|238711780|gb|EEQ03994.1| hypothetical protein yrohd0001_36180 [Yersinia rohdei ATCC 43380]
          Length = 321

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 88/253 (34%), Gaps = 17/253 (6%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-LNQQERIVYKS 226
           L  ++    N    + + +LL+A     +      +    + A S  +   ++++ ++ +
Sbjct: 74  LNALKQAQANVQSAQAQLALLKAGYRDEEIAQVKSEVSQREAAFSYAESFLKRQQGLWAN 133

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEK 285
                 ++   +            +  + A YL     +++ Q +   A   +     + 
Sbjct: 134 KATSANDLENARTARNQAQANLQASKDKLAQYLSGNRPQEIAQAEANLAQAEAAQAQAQL 193

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             +   +LSP  GT++  ++         S  +  +   +   ++RA ++   +     G
Sbjct: 194 NLQDTLLLSPSTGTVLT-RAVEPGTILSASNTVFTLS-LTDPVWVRAYISEPHLGQAIPG 251

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSD 400
               V F        K +   I  + P       S +  +L+T   Y + + ITD     
Sbjct: 252 TKVEV-FT--DGRPNKPYHGQIGFVSPTAEFTPKSVETPDLRTDLVYRLRIVITDA---- 304

Query: 401 NNIELRNGFPAEV 413
            +  LR G P  V
Sbjct: 305 -DESLRQGMPVTV 316



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 48/134 (35%), Gaps = 7/134 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V+ G +I  G  L   +D    + +   + ++++ +  +   K+      ++ 
Sbjct: 46  GRLASLSVDEGDKIQPGQVLGKLDDGPYLNALKQAQANVQSAQAQLALLKAGY---RDEE 102

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               K+  S+ E    +   +      ++    +S       +  R ++    + +L+  
Sbjct: 103 IAQVKSEVSQREAAFSYAESFLKRQQGLWANKATSANDLENARTARNQA----QANLQAS 158

Query: 185 SSLLRALLSSHQKD 198
              L   LS ++  
Sbjct: 159 KDKLAQYLSGNRPQ 172


>gi|239626792|ref|ZP_04669823.1| predicted protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516938|gb|EEQ56804.1| predicted protein [Clostridiales bacterium 1_7_47FAA]
          Length = 390

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 65/236 (27%), Gaps = 23/236 (9%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN---AVSQNDLNQQERIVYKSTLELR 231
            ++  +        +A   + Q    + K   E+N   A ++ +    +    +    L 
Sbjct: 85  QVDDTNAALSLQQAQAGYDAAQAAFGIAKKASEQNTNVAPAEIEYTDAKNNFARMQA-LY 143

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 +    +     D A  +          + +  +       + L I +K  +   
Sbjct: 144 AANAISQVDFENARSRMDSAEAKLQAARNGQDGNYDSAKAQLDSAKAALDIAQKKYDDCA 203

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + SPI G I      +             +M          +  +V    I  + KG   
Sbjct: 204 VTSPITGMITKINVET-GQTVSPQDTGATVMD----DSGEKVEIQVADTDIGQLAKGMPM 258

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNI 403
            +          K  +  I +I  +   +         Y V + +  D +  D  +
Sbjct: 259 DISL----QSAGKTCRGSISEISAVCDSKTGM------YTVKILLDADDSLHDTGL 304



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 41/155 (26%), Gaps = 2/155 (1%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +     + +I    SG +       G  + +G  +   +D      +   +      
Sbjct: 47  QGTVEAMSTI-DIMPETSGKVTAIIASEGQHVNKGDVIFQVDDTNAALSLQQAQAGYDAA 105

Query: 107 RCHI-DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           +      +K++    N     +E          +  L   ++     F    S +  +  
Sbjct: 106 QAAFGIAKKASEQNTNVAPAEIEYTDAKNNFARMQALYAANAISQVDFENARSRMDSAEA 165

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                      N    + +    +A L   QK   
Sbjct: 166 KLQAARNGQDGNYDSAKAQLDSAKAALDIAQKKYD 200


>gi|93005867|ref|YP_580304.1| secretion protein HlyD [Psychrobacter cryohalolentis K5]
 gi|92393545|gb|ABE74820.1| secretion protein HlyD [Psychrobacter cryohalolentis K5]
          Length = 427

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 75/230 (32%), Gaps = 14/230 (6%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSS-SGEILNEDNVVEIKSPFSG 65
            N       ++  + +L I+G+I    +      E  + +  G++  +     I +   G
Sbjct: 83  DNKSTKIKKAILALVILVILGVIAYGLYKSNQHSESQIITLQGQM--QMQQTSIAAKVPG 140

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I K  V  G  +  G  L+  +  E    I+  +   +  +  +D  ++          
Sbjct: 141 RIAKILVTEGDAVTVGQQLIEMDSPEINAKINQARAGKQMAQSQLDKAENGA-------- 192

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
              +  E  + +      K  S  ++     ++ +Y    M   +    Y   L  ++++
Sbjct: 193 ---RPQEIAQAKAAWQAHKAASDLAENTYQRVNRLYEEGLMARQKRDEAYAQYLATQDQT 249

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
              R       +             V+Q D   +E +V K    L+  I 
Sbjct: 250 EAARLQYELAMEGARSEDKSAATAQVAQVDAQLEEALVAKEEANLKSPIS 299



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/297 (12%), Positives = 82/297 (27%), Gaps = 11/297 (3%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +  +   +      R  ++L   G   +   ++       +   +       +       
Sbjct: 127 MQMQQTSIAAKVPGRIAKILVTEGDAVTVGQQLIEMDSPEINAKINQARAGKQMAQSQLD 186

Query: 180 DLENKSSLLR-ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             EN +     A   +  +      +L E        +N+       +  +  E   +  
Sbjct: 187 KAENGARPQEIAQAKAAWQAHKAASDLAENTY---QRVNRLYEEGLMARQKRDEAYAQYL 243

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                      +  L       E   D        A   ++L      +E+  + SPI+G
Sbjct: 244 ATQDQTEAARLQYELAMEGARSE---DKSAATAQVAQVDAQLEEALVAKEEANLKSPISG 300

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +V N   ++     Q  PL+ +V  +    +   VT   +     G       P  +  
Sbjct: 301 -VVDNVIVNAGEVIGQGVPLLTLVNTNDQWVV-LNVTETYLNQFAIGQRFMGTIPALSSP 358

Query: 359 REKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            +   K         +S           + ++V         ++ +  +R+G    V
Sbjct: 359 EKPYTKQFTVYATSTLSDFATWRPTNNDDGFDVRTFEVKARPTNPDRRIRSGMSVVV 415


>gi|229591285|ref|YP_002873404.1| hypothetical protein PFLU3850 [Pseudomonas fluorescens SBW25]
 gi|229363151|emb|CAY50188.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 414

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/317 (14%), Positives = 96/317 (30%), Gaps = 49/317 (15%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN-- 183
            L   F+   +  L   G+       +     +++   L+  L+          ++++  
Sbjct: 63  TLTAPFDGNVQANLVEQGQRVEAGQVLLRMDPATLEVQLREALSTQLKARRTVQEMQDWN 122

Query: 184 ----------KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                            +  + Q+ LT  +NLF++  + +N+L+  ++   +  L+L   
Sbjct: 123 NGPTVSRARRSLRTAEMIAGNTQRKLTESENLFKRGIIPRNELDDLKQQTQQQQLDLASA 182

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             E +  +      Y +                        +   K   L    E K I 
Sbjct: 183 RSELQQAIDQGKGEYRQI-----------------ADMELTNATVKYEALHTLLEGKDIK 225

Query: 294 SPIAGTIV-------------YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
           +P AG +V                   + +   Q Q L  +  + +   I AKV+   I 
Sbjct: 226 APFAGIVVPPPGNPSPQGGGNNTAPVQAGSKVSQGQVLFGLA-NIERLKIVAKVSELDIN 284

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            + +G    V    +   R       +  +  +    D+    Q  + V L I  L    
Sbjct: 285 QLHQGQAVEVLGDGFDGER---LTGSVSVVSGLAITSDSQGSAQ--FPVTLSIPKLTPQQ 339

Query: 401 NNIELRNGFPAEVLFTA 417
               +R G  A +    
Sbjct: 340 LQ-RVRLGMSARLTIVT 355



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 47/373 (12%), Positives = 115/373 (30%), Gaps = 30/373 (8%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G I  +  +  + +PF G ++   VE G ++  G  LL  +    T  + L++     L+
Sbjct: 54  GRIEPDTTI-TLTAPFDGNVQANLVEQGQRVEAGQVLLRMDP--ATLEVQLREALSTQLK 110

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                +   +   NN   V       R  +++    +   T S+            L   
Sbjct: 111 ARRTVQ--EMQDWNNGPTVSRARRSLRTAEMIAGNTQRKLTESENLFKRGIIPRNELDDL 168

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKS 226
             + +   L+     ++            + +  M+         + + L + + I    
Sbjct: 169 KQQTQQQQLDLASARSELQQAIDQGKGEYRQIADMELTNATVKYEALHTLLEGKDIKAPF 228

Query: 227 TLEL---------RENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQRTFADE 276
              +         +   +    +         +     AN  + +I   + +       +
Sbjct: 229 AGIVVPPPGNPSPQGGGNNTAPVQAGSKVSQGQVLFGLANIERLKIVAKVSELDINQLHQ 288

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
              + +L    + + +   ++  +V   + +S +      P+   +P         K+TP
Sbjct: 289 GQAVEVLGDGFDGERLTGSVS--VVSGLAITSDSQGSAQFPVTLSIP---------KLTP 337

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           +Q+Q V+ G +A +    Y + +     +    I    + +      +    V +     
Sbjct: 338 QQLQRVRLGMSARLTIVTYNNAQAIVVPSQ--AIQADKTVEYREAMDKPVERVKVTTGQS 395

Query: 397 AFSDNN-IELRNG 408
                    LR G
Sbjct: 396 TAQGVEVFGLRPG 408


>gi|190891717|ref|YP_001978259.1| protein secretion protein, HylD family [Rhizobium etli CIAT 652]
 gi|190696996|gb|ACE91081.1| putative protein secretion protein, HylD family [Rhizobium etli
           CIAT 652]
          Length = 430

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 80/225 (35%), Gaps = 18/225 (8%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD-EANLEFAN 257
           L     L      S+  +N  +  V K+  +L       + +   +      + +L+ A 
Sbjct: 122 LLDTNKLEADVKSSRAKVNSAKANVAKANADLESASTSLERLKSLVRSNVSTQQSLDDAT 181

Query: 258 YLKEISRDLEQ-NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS- 315
           Y  + +   +Q N+       + L + E    +  I+SPI G I+             S 
Sbjct: 182 YKYDSAVAAKQINEAEVLASEADLQLAEVNLAKAKIVSPIDGVILTRSVN-PGATVAASL 240

Query: 316 -QPLM-KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             P++  I    K   ++  V    +  +  G  A      Y D       A IE+I   
Sbjct: 241 SAPILFTIAGDLKKMELQVDVDEADVGKIAVGQKAKFTVDAYPDRSFP---AEIEQI-RF 296

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            S+  NN+ T   Y+ +L +      + ++ LR G  A    T +
Sbjct: 297 ASEVVNNVVT---YKAVLSVD-----NADLLLRPGMTATADITVE 333



 Score = 43.1 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 56/140 (40%), Gaps = 4/140 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + V+++G +   + V +I S  SG ++   V+  S I  G  L   +  +   
Sbjct: 72  AKRGDLTVLVTATGSVQPTEQV-DISSELSGTVRDVNVDYNSTIKAGDVLALLDTNKLEA 130

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE---KAFESREEQLLDFLGKYHSTCSK 151
            +   +  + + + ++    + L+  +   + L+   ++  S ++ L D   KY S  + 
Sbjct: 131 DVKSSRAKVNSAKANVAKANADLESASTSLERLKSLVRSNVSTQQSLDDATYKYDSAVAA 190

Query: 152 VFNYGISSVYRSLKMKLTRM 171
                   +     ++L  +
Sbjct: 191 KQINEAEVLASEADLQLAEV 210


>gi|119503130|ref|ZP_01625214.1| Secretion protein HlyD [marine gamma proteobacterium HTCC2080]
 gi|119460776|gb|EAW41867.1| Secretion protein HlyD [marine gamma proteobacterium HTCC2080]
          Length = 367

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 84/260 (32%), Gaps = 14/260 (5%)

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           +   + ++   + DLE     L A  +  +     ++        S  D  +  R+  + 
Sbjct: 83  QSDYLIALQRAQSDLEKARQQLAAGDAGVEAARAGLEAALANEMKSAKDFERLSRLYEQD 142

Query: 227 TLELRENIHEQKNM-LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  + E   E     L         A       +     D + +        S LT  + 
Sbjct: 143 SGTISERRLEMSEASLVAATAQVVAARANIQQAIDAKGGDDDSSNAYLKSAQSALTKAQL 202

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             +   + +  +G I   ++     +A   +P+M +V      ++ A  T   +  + +G
Sbjct: 203 DLDNTYVRAGKSGVITDLRA-EVGQFAGVGKPVMTLVATDD-LWVNAAFTENNLSALTEG 260

Query: 346 YTATVRFPHYADIREKKFKAIIEK-IDPIISQQDNN----------LQTQEYYEVILKIT 394
               + F        + +   +   +    + Q             L+  + + V ++IT
Sbjct: 261 TEVELLFDTLPGRVYEGYVLSVGLGVSASTNTQPGTLPSIQNNRDWLRQAQRFPVQIEIT 320

Query: 395 DLAFSDNNIELRNGFPAEVL 414
           DL+       LR G  A V+
Sbjct: 321 DLSDPHLRSALRMGGQASVV 340


>gi|157961044|ref|YP_001501078.1| secretion protein HlyD family protein [Shewanella pealeana ATCC
           700345]
 gi|157846044|gb|ABV86543.1| secretion protein HlyD family protein [Shewanella pealeana ATCC
           700345]
          Length = 383

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 89/290 (30%), Gaps = 43/290 (14%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + +   +    +SLK     + +   N    + K +  +A L++ Q     +  + +K 
Sbjct: 105 PQDYEIALQQAEQSLKKAGQNVGAQTANVAAAQAKVTNAQANLTNAQVQSKRIFAMVDKA 164

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +SQ D +     + K+   +     +       +                       +N
Sbjct: 165 VMSQADADNARAELTKAEAGVASAKADLAKAKERLGAE-------------------GEN 205

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                  +  L   +    + +I +P  G +  N       YA   QP+M  +  S+  +
Sbjct: 206 NTNVKSALLSLEKAQLDLTRTSITAPTNG-VASNFRLKEGIYASAGQPVMTFI-SSEDVW 263

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS----QQDNN----- 380
           I A      + +++ G               K F+A +  ID  I     +Q        
Sbjct: 264 IEAYFRENSLGNMQPGDKVEF---ALDYAPGKVFQATVGSIDYGIDWGQSEQTGKLAQVS 320

Query: 381 ------LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
                  Q Q +   I+     A     +    G   +V+    ++++  
Sbjct: 321 GQTGWLRQAQRFPVTIVLPAKEAMGLRRV----GGQVDVIVYTSDSSIIN 366


>gi|296116875|ref|ZP_06835480.1| secretion protein HlyD family protein [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295976568|gb|EFG83341.1| secretion protein HlyD family protein [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 358

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 81/299 (27%), Gaps = 42/299 (14%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E+L       +    +V    +++    +      +                 +A L   
Sbjct: 72  EELAHIEDDDYRAALEVARGNVAAAQGEVANLDAELGRQQAVIAGARAAVMADQAALVFA 131

Query: 196 QKDLTMMKNL-------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +++    +NL        E+   S    ++ E  V +    +   + +   +   +    
Sbjct: 132 RQNAARYRNLSVGGAGTVEQRQSSDARQSEAEATVARDQAAVDAAVGQVSVLQAQVQR-- 189

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                                Q         L          TI +P+ G +V  +    
Sbjct: 190 --------------------AQGNLLRANGALHQATLNLSYCTIPAPVEG-VVGERGVRV 228

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
             Y      L+ +VP      + A     Q+ HV+ G  AT+    +         A ++
Sbjct: 229 GAYVHPGTGLLAVVPTQAAYVL-ANFQETQLTHVRTGQAATIWVDTFPGR---PLHAHVD 284

Query: 369 KIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRN----GFPAEVLFTAKN 419
            + P      +    +  T  + +V+ +I      D    L      G   E      +
Sbjct: 285 SLAPATGVAFAPIQPDNATGNFTKVVQRIPVKLVFDPGQPLAAMVRVGMSVEARINTAS 343



 Score = 37.7 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/153 (11%), Positives = 43/153 (28%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +   ++   +  G  L   ED +    +++ + ++   +  +    + L       
Sbjct: 55  GRIDRVVAQDNEHVRPGEELAHIEDDDYRAALEVARGNVAAAQGEVANLDAELGRQQAVI 114

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                A  + +  L+          +       +   R             + R      
Sbjct: 115 AGARAAVMADQAALVFARQNAARYRNLSVGGAGTVEQRQSSDARQSEAEATVARDQAAVD 174

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +++ +  +   Q        L    A+ Q  LN
Sbjct: 175 AAVGQVSVLQAQVQRAQGNLLRANGALHQATLN 207


>gi|270489399|ref|ZP_06206473.1| efflux pump membrane protein [Yersinia pestis KIM D27]
 gi|270337903|gb|EFA48680.1| efflux pump membrane protein [Yersinia pestis KIM D27]
          Length = 255

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 79/205 (38%), Gaps = 17/205 (8%)

Query: 212 SQNDLNQQERIVYKSTLEL-RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +QNDL +  R+V  +   + RE +   ++ +       D A  ++      +     + Q
Sbjct: 4   AQNDLKR--RVVLGAAAVIGREELQHARDAVEAAQASLDMAVQQYNANQALVLNTPLEKQ 61

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  +K+     T ++  ++SPI+G +   +S           PLM +VP     +I
Sbjct: 62  PAIEQAAAKMRDAWLTLQRTKVVSPISGYVSR-RSVQVGAEISSGTPLMAVVPAD-QLWI 119

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNN 380
            A     Q+ +++ G  AT+    Y D     ++  +  +D          P  +   N 
Sbjct: 120 DANFKETQLANMRIGQPATIVTDFYGDDV--VYQGKVVGLDMGTGSAFSLLPAQNATGNW 177

Query: 381 LQTQEYYEVILKITDLAFSDNNIEL 405
           ++  +   V + + +    ++ + +
Sbjct: 178 IKVVQRLPVRIALDEKQLKEHPLRI 202


>gi|262164988|ref|ZP_06032726.1| multidrug resistance efflux pump [Vibrio mimicus VM223]
 gi|262027368|gb|EEY46035.1| multidrug resistance efflux pump [Vibrio mimicus VM223]
          Length = 354

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 88/305 (28%), Gaps = 41/305 (13%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + Q++D          + +   +     +L +    + +        + +     A   +
Sbjct: 63  DNQIVDAGEPLFKIDPRNYKIAVDVAQANLAIAGQSIGANTAAVEVAQARVVDALAARDN 122

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++       L  +   S+ DL+    +  ++   L           +++          
Sbjct: 123 AREQANRTATLVARGVSSKADLDNAIELKDRTQAGLEVAQASLVQAKQNLGPTGA----- 177

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                         N       M+ L   +   ++  +LSP  G +   Q  +    A  
Sbjct: 178 --------------NNPQILAAMANLEKAQLDLKKTEVLSPSRGIVTNMQL-TVGQLATV 222

Query: 315 SQPLMK-IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--- 370
             P+M  I P +   +I A      I+ ++ G    +                +E I   
Sbjct: 223 GTPVMTFIDPRN--VWISALARENSIEFIRPGQKVKIVLDALPGR---VLTGTVESIGWG 277

Query: 371 ---DPIISQQDN------NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                 +              T + Y + +   +   +D    +R G  A V F  + ++
Sbjct: 278 TGGSNDVDPTTGFINAGSTGFTPQRYPINIVFDN---TDELTNIRYGSQATVAFFTEQSS 334

Query: 422 LAQEI 426
           + + +
Sbjct: 335 VGEWL 339



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 72/212 (33%), Gaps = 16/212 (7%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
                  L    L +I+ +     WS     +     +        +V + S  SG I +
Sbjct: 4   AEKTSRKLSVYILATILAVWIYSLWS-----DRVTPITSNAKVHSYLVRVASEVSGNIVE 58

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-YDVLE 128
             V +   +  G PL   +       +D+ + ++      I    +A++    +  D L 
Sbjct: 59  VGVIDNQIVDAGEPLFKIDPRNYKIAVDVAQANLAIAGQSIGANTAAVEVAQARVVDALA 118

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               +RE+          +T         + +  ++++K      + + +  L      L
Sbjct: 119 ARDNAREQ------ANRTATLVARGVSSKADLDNAIELKDRTQAGLEVAQASLVQAKQNL 172

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
               +++ + L  M NL +    +Q DL + E
Sbjct: 173 GPTGANNPQILAAMANLEK----AQLDLKKTE 200


>gi|78059674|ref|YP_366249.1| multidrug resistance protein MdtN [Burkholderia sp. 383]
 gi|77964224|gb|ABB05605.1| Secretion protein, HlyD family [Burkholderia sp. 383]
          Length = 351

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 84/263 (31%), Gaps = 26/263 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     R + L     + +          + ++ R + +    + +   N   ++
Sbjct: 61  EMPVRDNQPVKRGDLLFRIDPRPYQDALNQARARLVTLERQIGLTQRTVNAQQYNADSVK 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L  M+ L     +S  D+++       +  EL   + + +    
Sbjct: 121 AAVERSRAQAVQAADTLHRMEPLLAPGYMSAEDVDRARTAERAAQAELNAAMLQAQQASA 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A+  +++ I E   E   + +P  G +  
Sbjct: 181 AVSGVDALVAQR-------------------AEVEAQIAIAELNLEFTEVRAPFDGRVAS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ +   +A   +P+  ++       I A      ++ V+ G +ATV    Y      K
Sbjct: 222 LRT-TVGQFASALKPVFTLIDIRHWYVI-ANFRETDLKGVRAGTSATV----YLLSDTGK 275

Query: 363 -FKAIIEKIDPIISQQDNNLQTQ 384
            F   ++ I   +   D  +  +
Sbjct: 276 HFDGEVDSISYGVLPDDGGVVQE 298



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 82/246 (33%), Gaps = 16/246 (6%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M      + K++ PA L  +  L ++G++    W     ++ ++++    +  D +  + 
Sbjct: 1   MSDASGASRKKSLPAWLIVVATLVLLGVV---VW----RLDQALTTDDAYVYADTINVVP 53

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
                I+ +  V +   + +G  L   +     D ++  +  +  L   I   +  ++  
Sbjct: 54  EVTGKIV-EMPVRDNQPVKRGDLLFRIDPRPYQDALNQARARLVTLERQIGLTQRTVNAQ 112

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               D ++ A E    Q +      H     +    +S+          R     LN   
Sbjct: 113 QYNADSVKAAVERSRAQAVQAADTLHRMEPLLAPGYMSAEDVDRARTAERAAQAELNAAM 172

Query: 181 LENKSSLLRAL----LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           L+ + +         L + + ++     + E N     +  +           LR  + +
Sbjct: 173 LQAQQASAAVSGVDALVAQRAEVEAQIAIAELNL----EFTEVRAPFDGRVASLRTTVGQ 228

Query: 237 QKNMLR 242
             + L+
Sbjct: 229 FASALK 234


>gi|299856759|pdb|3LNN|A Chain A, Crystal Structure Of Zneb From Cupriavidus Metallidurans
 gi|299856760|pdb|3LNN|B Chain B, Crystal Structure Of Zneb From Cupriavidus Metallidurans
          Length = 359

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 78/240 (32%), Gaps = 27/240 (11%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + L++ L     + +++ K L ++              + ++  +  +         R++
Sbjct: 55  AKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSADLAQANSDAAKARAAMTMARRNL 114

Query: 245 NELYDEANLEFANYL--KEISRDLEQNQRTFADEMSKLTILEKTREQKT---------IL 293
           +   +    E A     ++   D +Q         ++L  L                 + 
Sbjct: 115 DRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGGHILAVR 174

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SPI G +V   + +   Y   +   +  V      ++ A    K + HV  G +ATV+F 
Sbjct: 175 SPINGRVVDLNAAT-GAYWNDTTASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFD 233

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y D +       +  +  I+       +             + F + +  LR G  A+ 
Sbjct: 234 AYDDPQ----PGKVRYVGQILDADTRTTKV-----------RMVFDNPDGRLRPGMFAQA 278



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 36/106 (33%), Gaps = 6/106 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            +V++  P +G I     + G ++  G  L T +        DL + +    +       
Sbjct: 56  KLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTID------SADLAQANSDAAKARAAMTM 109

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +    +     +    R+ +         ++ S+  +  ++ +
Sbjct: 110 ARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQL 155


>gi|270291684|ref|ZP_06197900.1| competence factor transport protein ComB [Streptococcus sp. M143]
 gi|270279769|gb|EFA25610.1| competence factor transport protein ComB [Streptococcus sp. M143]
          Length = 449

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 55/426 (12%), Positives = 141/426 (33%), Gaps = 37/426 (8%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S+    EIS+S+   +     +  I+S  +  I    +E    + QG  L+ ++      
Sbjct: 38  SVFAEKEISLSTRATVEPSRIIANIQSTSNQRIVANYLEENKLVKQGDLLVQYQQGAEAV 97

Query: 95  LIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEK-----------AFESREEQLLD 140
             +     +   K+ +  +   +S+L   ++++   +K           +  S     + 
Sbjct: 98  QAEAYANQLEMFKDQKKQLGYLQSSLKEGSDQFPEADKFGYQEMFLDYLSQASSLRSNVS 157

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA----LLSSHQ 196
                 S+ +   +   + +   +     ++R     +  +E  + L R           
Sbjct: 158 QQNASISSQNAAASQSQAEIGNLISQTEDKIRDYNTAKSAIETGAQLDRQNPAYSFYQTY 217

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           K+        +   ++Q D   Q   +  S    R           +   L  +     +
Sbjct: 218 KNQAGEDPQAKSQVIAQVD--AQISQLESSLATYRVQYAGSGAQQAYATGLASQLESLKS 275

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            +L ++ ++L    +   +  S   +     ++  I +   G +  N   S S    +  
Sbjct: 276 QHLVKVGQELTLLDQKILEADSGKKVQGGLLDKGKITASEDGVLHLNPETSDSTMVAEGT 335

Query: 317 PLMKIVPH---SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKKFKAIIEKIDP 372
            L ++ P       T + A ++ K +  +K G +  VR+    D + +    + I  ID 
Sbjct: 336 LLAQLYPSLEKEGKTKLTAYLSSKDVARIKIGDS--VRYTTTNDAKNQIFLDSTITSIDA 393

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
             ++ +       ++++  + +     +   ELR G    +       +  +  +    D
Sbjct: 394 TATKTEKG----NFFKIEAETS--LTPEQAEELRYGSEGRLTLITGKKSYLRYYL----D 443

Query: 433 NW-PKI 437
            +  + 
Sbjct: 444 QFLNRA 449


>gi|168069614|ref|XP_001786514.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162661118|gb|EDQ48674.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1133

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 95/277 (34%), Gaps = 45/277 (16%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           LD         +       +++ RS   +      +   +L +E      +   +  +++
Sbjct: 5   LDTAALQQGINAAQGQVASANIRRSKAAQGPEAHELQTQKLQVEKA----KQTAAKAEQE 60

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               + L+   A+S+++L++      ++ L+L+E       +L+  + L           
Sbjct: 61  HAQAQALYAGGAISKDELDRLALADRQAKLDLQEEEVAYGKLLKGADRL----------- 109

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN---QSFSSSNYAQQS 315
                 D+E+          +L+  ++      + +P +G +      QS  +       
Sbjct: 110 ------DVEEANAQVQQANVELSRAKQEAADAVLKAPFSGIVAAIPQAQSEQTG----PG 159

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             ++++V  +    I+ +V  +QI   + G  ATV+          + +  +  + P++ 
Sbjct: 160 SEVIRLV-DTSSWLIKLQVESEQISSWQPGAAATVK-----AQDGTEAEGKVSFVSPVMD 213

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           Q   +      Y V + +     +        G    
Sbjct: 214 QALGS------YPVEVTVAGSEVNWKG-----GMTVT 239


>gi|83311863|ref|YP_422127.1| membrane-fusion protein [Magnetospirillum magneticum AMB-1]
 gi|82946704|dbj|BAE51568.1| Membrane-fusion protein [Magnetospirillum magneticum AMB-1]
          Length = 335

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 73/216 (33%), Gaps = 20/216 (9%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + + + +      E R  I E +    +  E    +    A   +      ++ +  +  
Sbjct: 81  VKEGQPLARLDDREARARIAELEAKAAYWREEMARSATLTARGYRSTEAT-QKARSEYNQ 139

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             + +    + R    + SP+ G ++  +       A+    L   V   +   I A+V 
Sbjct: 140 VTAAINAARQKRTDLLVTSPMDGMVLK-RDGEIGELAEVKDALFW-VGAPRPLRITAEVD 197

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            + I  V+ G    ++   +A+      +A ++++ P     +        + V + + D
Sbjct: 198 EEDIARVRIGQKVLIKADAFAER---VLEAKVDRVTPKGDPVNKT------FRVRVVLPD 248

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
                 +  L  G   E+         A  ++ PIT
Sbjct: 249 ------DTPLLVGMTTEINIITAEH--ADVLLVPIT 276



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 34/112 (30%), Gaps = 2/112 (1%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            ++ ++G +  E     I     G I +     G  + +G PL   +D E    I   + 
Sbjct: 46  EAIYATGTVEAEKWAR-IAPVVPGRIAEILAFEGDAVKEGQPLARLDDREARARIAELEA 104

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                R  +    + L     +     +   S   Q+   +       + + 
Sbjct: 105 KAAYWREEM-ARSATLTARGYRSTEATQKARSEYNQVTAAINAARQKRTDLL 155


>gi|238795637|ref|ZP_04639152.1| Multidrug resistance protein A [Yersinia mollaretii ATCC 43969]
 gi|238720756|gb|EEQ12557.1| Multidrug resistance protein A [Yersinia mollaretii ATCC 43969]
          Length = 390

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 68/179 (37%), Gaps = 8/179 (4%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE-----RIVYKSTLEL-R 231
               E   + L   +    + +   K      A+ + +LNQ +     R+V  +   + R
Sbjct: 98  EQAYEQAKTALANSVRQTHQLIINSKQYQANIALRKTELNQAQSDLKRRVVLGAAAAIGR 157

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E +   ++ +       D A  ++      +     + Q       +KL       ++  
Sbjct: 158 EELQHARDAVDAAQASLDVAIQQYNANQALVLDTPLEKQPAVEQSAAKLRDAWLALQRTK 217

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +LSP++G +   +S           PLM ++P +   ++ A     Q+ +++ G +ATV
Sbjct: 218 VLSPVSGYVSR-RSVQVGAKIANGSPLMAVIPAN-QMWVDANFKETQLANMRIGQSATV 274



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/151 (11%), Positives = 51/151 (33%), Gaps = 10/151 (6%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-----IDTEKSALDFLNNKYDVLEKA 130
             +  G  L+T +  +     +  K ++ N         I++++   +    K ++ +  
Sbjct: 81  DVVKSGDVLVTLDPTDAEQAYEQAKTALANSVRQTHQLIINSKQYQANIALRKTELNQAQ 140

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLL 188
            + +   +L           +     + +   SL + + +  +     LD  LE + ++ 
Sbjct: 141 SDLKRRVVLGAAAAIGREELQHARDAVDAAQASLDVAIQQYNANQALVLDTPLEKQPAVE 200

Query: 189 RALLSSHQKDLTMMKNLFE---KNAVSQNDL 216
           ++        L + +          VS+  +
Sbjct: 201 QSAAKLRDAWLALQRTKVLSPVSGYVSRRSV 231


>gi|322500288|emb|CBZ35366.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 1591

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 84/261 (32%), Gaps = 32/261 (12%)

Query: 85   LTFE-DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L  + D E+  +   ++ +++  R      K     +      LE+  E R  +L    G
Sbjct: 1153 LELDTDSESQSVFQKQQGTLQRARERFLHLKGEGAVMRKNSMRLEREIEVRTNELQLLDG 1212

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                         + S    L  ++ ++      R  +  K   +   L    ++L   K
Sbjct: 1213 A---------KAALQSQLTDLTQQVAQLHQDIDERDSVTEKKEKVIYSLKKRNQELEKHK 1263

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                   V  + + + +  +     E+ E   E K    ++ E +  +NL      +E+ 
Sbjct: 1264 ------YVLDHQIRELKGQIEPKQREIAELNQETKQQNANLEEQHT-SNLTLRQNTEELK 1316

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            +D+ + QRT    + +L  LE  R +                      A Q Q    +  
Sbjct: 1317 KDIAEQQRTLQARLRELQGLETYRSRAE--------------RDIGELAHQLQDPASLAA 1362

Query: 324  HSKLTYIRAKVTPKQIQHVKK 344
                 Y    V P+ ++ +  
Sbjct: 1363 AVARLY-EVHVAPRDVKQIAP 1382



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 65/180 (36%), Gaps = 10/180 (5%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             G+ + + +  L  E    T+ + L   +   L+  +      +  L+   D  +   E 
Sbjct: 1185 EGAVMRKNSMRLEREIEVRTNELQLLDGAKAALQSQLTDLTQQVAQLHQDIDERDSVTEK 1244

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRLDLENKSSLLRALL 192
            +E+ +     +      +   Y +    R LK ++  + R I     + + +++ L    
Sbjct: 1245 KEKVIYSLKKRNQEL--EKHKYVLDHQIRELKGQIEPKQREIAELNQETKQQNANLEEQH 1302

Query: 193  SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            +S+       + L       + D+ +Q+R +     EL+     +    R I EL  +  
Sbjct: 1303 TSNLTLRQNTEEL-------KKDIAEQQRTLQARLRELQGLETYRSRAERDIGELAHQLQ 1355



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 76/221 (34%), Gaps = 11/221 (4%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
               L  ++    D     +      +  +DT       L ++ +  + A  +  + L   
Sbjct: 1050 QTFLDAKNEMARDAAQTLEDVEMERQREVDTLADECGALQHRLETTKVAHAAELKTLRAS 1109

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMR------SIYLNRLDLE---NKSSLLRALL 192
            L +  +     F   +S    +++    ++        + L++L+L+      S+ +   
Sbjct: 1110 LAQARTEDEAHFQDVLSQRTEAVRKLHRQLEHSNETNRVTLHQLELDTDSESQSVFQKQQ 1169

Query: 193  SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
             + Q+      +L  + AV + +  + ER +   T EL+     +  +   + +L  +  
Sbjct: 1170 GTLQRARERFLHLKGEGAVMRKNSMRLEREIEVRTNELQLLDGAKAALQSQLTDLTQQVA 1229

Query: 253  L--EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               +  +    ++   E+   +      +L   +   + + 
Sbjct: 1230 QLHQDIDERDSVTEKKEKVIYSLKKRNQELEKHKYVLDHQI 1270



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 59/187 (31%), Gaps = 5/187 (2%)

Query: 107  RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            +  ++ ++  ++ L    + L+   ES +++     G      ++       ++      
Sbjct: 981  KQEMEEQRIEIESLQQYIEKLKTDMESEDKRRAHEQGTRTRERAEELQQDAIALAAEYDA 1040

Query: 167  KLTRMRSIYLNRLDLENKSS--LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                        LD +N+ +    + L     +    +  L ++    Q+ L   E    
Sbjct: 1041 LQHAKADQEQTFLDAKNEMARDAAQTLEDVEMERQREVDTLADECGALQHRL---ETTKV 1097

Query: 225  KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                EL+                + +   +    ++++ R LE +  T    + +L +  
Sbjct: 1098 AHAAELKTLRASLAQARTEDEAHFQDVLSQRTEAVRKLHRQLEHSNETNRVTLHQLELDT 1157

Query: 285  KTREQKT 291
             +  Q  
Sbjct: 1158 DSESQSV 1164


>gi|87301394|ref|ZP_01084235.1| hypothetical protein WH5701_15951 [Synechococcus sp. WH 5701]
 gi|87284362|gb|EAQ76315.1| hypothetical protein WH5701_15951 [Synechococcus sp. WH 5701]
          Length = 394

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 66/203 (32%), Gaps = 10/203 (4%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           ++ + + +D  +    L  +  + Q    + + L  +  V    + Q + ++    +++R
Sbjct: 73  QARFSDDVDTISTLEALSVVELAAQAGGRIERLLVRQGDV----VRQGQLLMVLDQVQVR 128

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++   +  L      Y                  +Q +  F      L   E     + 
Sbjct: 129 ADVASLRAQLEKDELNYKRFEFLVRQGAASAL-QRDQFRAQFVQSREALRAREADLAFRD 187

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + SP  G I   Q     +      P  K+V  +     R  V       V+ G   T++
Sbjct: 188 LRSPSDGVISDLQV-KVGDVISAGDPFTKVV-RNDRLTARIDVPGVLTARVRPGLPVTLQ 245

Query: 352 FPHYADIREKKFKAIIEKIDPII 374
            P          + ++  +DP++
Sbjct: 246 EP---QSPRVLARGVVSSVDPVV 265



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/106 (11%), Positives = 33/106 (31%), Gaps = 4/106 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I++  V  G  + QG  L+  + ++    +   +  ++    +        +FL  +
Sbjct: 99  GGRIERLLVRQGDVVRQGQLLMVLDQVQVRADVASLRAQLEKDELNYKR----FEFLVRQ 154

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                   +    Q +       +  + +    + S    +   L 
Sbjct: 155 GAASALQRDQFRAQFVQSREALRAREADLAFRDLRSPSDGVISDLQ 200


>gi|296272764|ref|YP_003655395.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
 gi|296096938|gb|ADG92888.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
          Length = 326

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 55/354 (15%), Positives = 117/354 (33%), Gaps = 88/354 (24%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I K   + G ++ +   L + +        DL + S+  ++  +D +K  ++ L   Y
Sbjct: 47  GKISKIYFDEGQKVKKDDLLASVDK-------DLFQQSLDEIKAQVDMQKIQVEKLEKGY 99

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                        R   I   +  L   
Sbjct: 100 ---------------------------------------------RKEEIAKAKALLAKS 114

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           S++L       Q DL     L + N++S+   +        +  +   + +  + +    
Sbjct: 115 SAVLNK----AQIDLKRYNKLLKTNSISKEKHDDILLSYNSAKAQYDYDKNNYEQLQNGY 170

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +   E+      YL+E  ++                  +       + +P  GTI+  +
Sbjct: 171 QKEDIESAHAKLKYLQEQEKE-----------------AQIHLHDTQLFAPNDGTILT-R 212

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           ++       QS P++++       ++R+ ++ K +  +K    A V   +      K +K
Sbjct: 213 AYEVGAIVPQSSPIIEMA-LQNQYWVRSYISEKYLGIIKPNMQAKV---YTDSRPNKPYK 268

Query: 365 AIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           AI+  I P       S Q   L+TQ  Y V L + +     ++  ++ G P  +
Sbjct: 269 AIVSFISPQAEFTPKSVQTQELRTQLVYRVRLILQE-----HDDLIQQGMPVTI 317


>gi|167767639|ref|ZP_02439692.1| hypothetical protein CLOSS21_02172 [Clostridium sp. SS2/1]
 gi|167710656|gb|EDS21235.1| hypothetical protein CLOSS21_02172 [Clostridium sp. SS2/1]
          Length = 410

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 75/194 (38%), Gaps = 24/194 (12%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           ++ +L ++I + ++ +  + +  ++++    +Y   +        R + D   KL+ L+ 
Sbjct: 139 TSSDLEDSITQLESQIETLEDTIEDSDSSDDDYASNV--------RKYKDLTMKLSTLKT 190

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
            R   T+ S   G +    + +      + Q + K++  +    +   V    I+ VKKG
Sbjct: 191 ERSNLTVTSKYNGIVSG--TITKGKTISKGQSVCKVL-KTSSYKVTINVDELDIKSVKKG 247

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            + TV       + +K F   + K+  + S  D        Y V +++++ A      +L
Sbjct: 248 QSVTV--TA-DAVEDKTFTGKVTKVSKVGSTSDGVAT----YPVTIQLSNAA------DL 294

Query: 406 RNGFPAEVLFTAKN 419
                     T   
Sbjct: 295 LPSMSVTATITTAK 308



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    IE +V  SG +      V   S     ++    ++G+ + +G  +      +  D
Sbjct: 88  ATTGTIEKTVEGSGSVKATTQNVTFSSDV--TVQSVLKKDGATVKKGDVIAKLTSSDLED 145

Query: 95  LIDLKKVSIKNLRCHID 111
            I   +  I+ L   I+
Sbjct: 146 SITQLESQIETLEDTIE 162


>gi|149369612|ref|ZP_01889464.1| cation efflux system protein/acriflavin resistance protein B family
           [unidentified eubacterium SCB49]
 gi|149357039|gb|EDM45594.1| cation efflux system protein/acriflavin resistance protein B family
           [unidentified eubacterium SCB49]
          Length = 387

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 95/254 (37%), Gaps = 14/254 (5%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            K    + A  +++++L+  +G+      ++     + +    K   T    ++ + L+L
Sbjct: 34  EKIQSKKDALVTQQQELVAQIGQLDKKLEELNPEKNTPLITVFKATDT----VFNHYLEL 89

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +      + ++ + +    + +    +   VS+  L             + + + + + +
Sbjct: 90  QGSVETDQNIIVTPEMGGILQRVYVTEGQTVSKGQLLA-----KVDDGGMSQQLAQMQ-V 143

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              + +   E      +        L Q + ++  +   +  +++   +  I +P +GTI
Sbjct: 144 QAELAKTTYERQQRLWDQKIGSEIQLLQAKSSYEAQQKAINSMQQQLGKSNIKAPFSGTI 203

Query: 301 VYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
             +      +     Q P+++IV  +   Y++A +    +  V KG +  V FP      
Sbjct: 204 -DDVITEQGSVVSPGQTPVLRIVSLND-MYVKADIPETYLTSVVKGKSVEVLFPVLGKTV 261

Query: 360 EKKFKAIIEKIDPI 373
           + K     + I+P 
Sbjct: 262 DAKITQTGDFINPD 275



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 5/113 (4%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +  + N+  +     GI+++  V  G  + +G  L   +D   +  +   +V  +  
Sbjct: 90  QGSVETDQNI-IVTPEMGGILQRVYVTEGQTVSKGQLLAKVDDGGMSQQLAQMQVQAELA 148

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +   + ++   D        L +A  S E Q        +S   ++    I +
Sbjct: 149 KTTYERQQRLWDQKIGSEIQLLQAKSSYEAQ----QKAINSMQQQLGKSNIKA 197


>gi|1477646|gb|AAB05427.1| plectin [Homo sapiens]
 gi|1477651|gb|AAB05428.1| plectin [Homo sapiens]
          Length = 4574

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1370 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1429

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++    +    +  +++ K+    A   S  +    ++       
Sbjct: 1430 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR------- 1482

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1483 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1541

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +   T   + +++
Sbjct: 1542 VELASRVKAETEAAREKQR 1560



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2210 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2265

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2266 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2326 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2385

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2386 EETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2429



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++        +  ++ LR   + E   +     + +  E++    EE++     +  +T 
Sbjct: 1436 VDAQQQKRSIQEELQQLRQSSEAE---IQAKARQAEAAERSRLRIEEEIRVVRLQLEATE 1492

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +            L+    R       +   + ++  LR  +    +     +      
Sbjct: 1493 RQ-----RGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASR 1547

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQ 268
              ++ +  ++++   ++  ELR    E +  LR    E   +  +      +    +L+ 
Sbjct: 1548 VKAETEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQS 1607

Query: 269  NQRTFADEMSKLT 281
             + +FA++ ++L 
Sbjct: 1608 KRASFAEKTAQLE 1620



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2259 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2318

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2319 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2378

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2379 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2438

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2439 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2469



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1667 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1726

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1727 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1783

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1784 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1835

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1836 LAEEAKRQRQLAEED 1850



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 6/148 (4%)

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +     ++            ++  L + R +       + ++      L    ++  + +
Sbjct: 1372 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1431

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                       D  QQ+R + +   +LR++   +        E  + + L     ++ + 
Sbjct: 1432 EEAA------VDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR 1485

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
              LE  +R       +L  L    E+  
Sbjct: 1486 LQLEATERQRGGAEGELQALRARAEEAE 1513



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 54/183 (29%), Gaps = 8/183 (4%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + F++     +E+     E+Q  +   +     + +      +   +         +  L
Sbjct: 1361 IKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKEL 1420

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-------QERIVYKSTLE 229
             +   E       A + + Q+  ++ + L +    S+ ++          ER   +   E
Sbjct: 1421 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1480

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +R    + +   R       E         +E      Q Q        ++    + + Q
Sbjct: 1481 IRVVRLQLEATERQRGGAEGELQA-LRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQ 1539

Query: 290  KTI 292
              +
Sbjct: 1540 AEV 1542



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2347 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2406

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL R+  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2407 AEAERLKL-RVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2464

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2465 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2504



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1578 RLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1637

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1638 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1697

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1698 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1753

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1754 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1786



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1483 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1536

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1537 KRQAEVE--LASRVKAETEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1594

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1595 ETAQRSA--EAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1652

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1653 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1684


>gi|330502461|ref|YP_004379330.1| secretion protein HlyD family protein [Pseudomonas mendocina NK-01]
 gi|328916747|gb|AEB57578.1| secretion protein HlyD family protein [Pseudomonas mendocina NK-01]
          Length = 283

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 72/221 (32%), Gaps = 30/221 (13%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF------ANYLKEISRDLEQN 269
           L   +R  Y++ +E  + + + +     + E               A  L+    + E  
Sbjct: 71  LMSIDRDRYQAAVEKAKAVVDIRRQQLSLREHEASRRSRLGAQAISAELLENAQINAEMA 130

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +  + +  + L + E    +  + +P  G I      +  NY    Q +M +V  +   Y
Sbjct: 131 RSEYREAQADLRVAELNLARSEVQAPRDGQITNL-VLAQGNYVNAGQAVMALV-DTNSFY 188

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----- 384
           ++A     ++  ++ G    V             +  +E I   I+ ++ +   Q     
Sbjct: 189 VQAYFEETKLPRIQVGAPVEVWLMGGDQQ----IRGEVESISRGITDRNASPDGQLLADV 244

Query: 385 ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                     +   V +K+  +      + L  G  A V  
Sbjct: 245 EPTFNWVRLAQRIPVRIKLDQV---PEGMVLSAGMTASVRV 282



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 6/143 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI- 110
              +VV I    SG + + +V +  Q+  G  L++ +       ++  K  +   R  + 
Sbjct: 39  VRADVVTIAPDVSGWVVELKVRDNQQVKAGDLLMSIDRDRYQAAVEKAKAVVDIRRQQLS 98

Query: 111 -----DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                 + +S L       ++LE A  + E    ++            N   S V     
Sbjct: 99  LREHEASRRSRLGAQAISAELLENAQINAEMARSEYREAQADLRVAELNLARSEVQAPRD 158

Query: 166 MKLTRMRSIYLNRLDLENKSSLL 188
            ++T +     N ++       L
Sbjct: 159 GQITNLVLAQGNYVNAGQAVMAL 181


>gi|204930021|ref|ZP_03221042.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204321015|gb|EDZ06216.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
          Length = 331

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/388 (12%), Positives = 112/388 (28%), Gaps = 92/388 (23%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
            TW      +  ++  G +  +   V I     G +    V+ G  I  G  L       
Sbjct: 21  GTWWYQSRQDDGLTLYGNV--DIRTVNISFRVGGRLASLNVDEGDAIKAGQVL------- 71

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                   ++        +   K+ +     +YD++   +   E                
Sbjct: 72  -------GELDHAPYENALMQAKAGVSVAQAQYDLMLAGYRDEE---------------- 108

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                                                +A     Q      + L++   +
Sbjct: 109 --------------------------IAQAAAAVRQSQAAYDYAQNFYNRQQGLWKSRTI 142

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           S NDL                     ++           A  + + Y      +D+ Q +
Sbjct: 143 SANDL------------------ENARSSRDQAQATLKSAQDKLSQYRTGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   +   +  T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 185 ASLEQAKAQLAQAQLDLQDTTLIAPANGTLLT-RAVEPGSMLNAGSTVLTLS-LTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLSQTQPGRDILL---YTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIIVTDADDA-----LRQGMPVTV 322


>gi|146091106|ref|XP_001466446.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134070808|emb|CAM69166.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 1591

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 84/261 (32%), Gaps = 32/261 (12%)

Query: 85   LTFE-DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L  + D E+  +   ++ +++  R      K     +      LE+  E R  +L    G
Sbjct: 1153 LELDTDSESQSVFQKQQGTLQRARERFLHLKGEGAVMRKNSMRLEREIEVRTNELQLLDG 1212

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                         + S    L  ++ ++      R  +  K   +   L    ++L   K
Sbjct: 1213 A---------KAALQSQLTDLTQQVAQLHQDIDERDSVTEKKEKVIYSLKKRNQELEKHK 1263

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                   V  + + + +  +     E+ E   E K    ++ E +  +NL      +E+ 
Sbjct: 1264 ------YVLDHQIRELKGQIEPKQREIAELNQETKQQNANLEEQHT-SNLTLRQNTEELK 1316

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            +D+ + QRT    + +L  LE  R +                      A Q Q    +  
Sbjct: 1317 KDIAEQQRTLQARLRELQGLETYRSRAE--------------RDIGELAHQLQDPASLAA 1362

Query: 324  HSKLTYIRAKVTPKQIQHVKK 344
                 Y    V P+ ++ +  
Sbjct: 1363 AVARLY-EVHVAPRDVKQIAP 1382



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 65/180 (36%), Gaps = 10/180 (5%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             G+ + + +  L  E    T+ + L   +   L+  +      +  L+   D  +   E 
Sbjct: 1185 EGAVMRKNSMRLEREIEVRTNELQLLDGAKAALQSQLTDLTQQVAQLHQDIDERDSVTEK 1244

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRLDLENKSSLLRALL 192
            +E+ +     +      +   Y +    R LK ++  + R I     + + +++ L    
Sbjct: 1245 KEKVIYSLKKRNQEL--EKHKYVLDHQIRELKGQIEPKQREIAELNQETKQQNANLEEQH 1302

Query: 193  SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            +S+       + L       + D+ +Q+R +     EL+     +    R I EL  +  
Sbjct: 1303 TSNLTLRQNTEEL-------KKDIAEQQRTLQARLRELQGLETYRSRAERDIGELAHQLQ 1355



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 76/221 (34%), Gaps = 11/221 (4%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
               L  ++    D     +      +  +DT       L ++ +  + A  +  + L   
Sbjct: 1050 QTFLDAKNEMARDAAQTLEDVEMERQREVDTLADECGALQHRLETTKVAHAAELKTLRAS 1109

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMR------SIYLNRLDLE---NKSSLLRALL 192
            L +  +     F   +S    +++    ++        + L++L+L+      S+ +   
Sbjct: 1110 LAQARTEDEAHFQDVLSQRTEAVRKLHRQLEHSNETNRVTLHQLELDTDSESQSVFQKQQ 1169

Query: 193  SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
             + Q+      +L  + AV + +  + ER +   T EL+     +  +   + +L  +  
Sbjct: 1170 GTLQRARERFLHLKGEGAVMRKNSMRLEREIEVRTNELQLLDGAKAALQSQLTDLTQQVA 1229

Query: 253  L--EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               +  +    ++   E+   +      +L   +   + + 
Sbjct: 1230 QLHQDIDERDSVTEKKEKVIYSLKKRNQELEKHKYVLDHQI 1270



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 59/187 (31%), Gaps = 5/187 (2%)

Query: 107  RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            +  ++ ++  ++ L    + L+   ES +++     G      ++       ++      
Sbjct: 981  KQEMEEQRIEIESLQQYIEKLKTDMESEDKRRAHEQGTRTRERAEELQQDAIALAAEYDA 1040

Query: 167  KLTRMRSIYLNRLDLENKSS--LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                        LD +N+ +    + L     +    +  L ++    Q+ L   E    
Sbjct: 1041 LQHAKADQEQTFLDAKNEMARDAAQTLEDVEMERQREVDTLADECGALQHRL---ETTKV 1097

Query: 225  KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                EL+                + +   +    ++++ R LE +  T    + +L +  
Sbjct: 1098 AHAAELKTLRASLAQARTEDEAHFQDVLSQRTEAVRKLHRQLEHSNETNRVTLHQLELDT 1157

Query: 285  KTREQKT 291
             +  Q  
Sbjct: 1158 DSESQSV 1164


>gi|254412870|ref|ZP_05026643.1| efflux transporter, RND family, MFP subunit, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196180605|gb|EDX75596.1| efflux transporter, RND family, MFP subunit, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 586

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 72/229 (31%), Gaps = 27/229 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++          T +R+  +   +   + + L+A L   Q        L  + A++Q+D
Sbjct: 169 ELAEAQAEADAMETSLRASQVQIEEQTQEIARLQAELDYLQLRQNRFATLVAEGAIAQDD 228

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L+     V      +R                      +       +  +++QN+     
Sbjct: 229 LDIVASEVKAKQAAIR----------------------KAQAARARLLAEVDQNRAKVGQ 266

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             +++      +    + SPI+G I   +        Q    ++KI        ++A V 
Sbjct: 267 ARAEVGTATVMQSYTKLQSPISGIIQT-RMVDPGVVVQPGMGVLKIG-DYSRVRLQANVA 324

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
            +    ++ G     + P    + ++     I  I P  +     +  +
Sbjct: 325 QEDAGSIRVGTPIQAQVPG---VTDQPLTGEITSIFPQTNNNTRTVTVE 370



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 54/163 (33%), Gaps = 3/163 (1%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L   E SVS +G I+    V  +    +G +  + V  G ++  G  L   +  E +  +
Sbjct: 112 LGEFEASVSYTGSIMPYQEV-VVYPRVAGQLTNYSVYPGDRVKAGQVLAQLDATERSTEL 170

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              +     +   +   +  ++    +   L+   +    QL             +    
Sbjct: 171 AEAQAEADAMETSLRASQVQIEEQTQEIARLQAELDYL--QLRQNRFATLVAEGAIAQDD 228

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           +  V   +K K   +R     R  L  +    RA +   + ++
Sbjct: 229 LDIVASEVKAKQAAIRKAQAARARLLAEVDQNRAKVGQARAEV 271


>gi|307547032|ref|YP_003899511.1| secretion protein HlyD [Halomonas elongata DSM 2581]
 gi|307219056|emb|CBV44326.1| secretion protein HlyD family protein [Halomonas elongata DSM 2581]
          Length = 355

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 81/270 (30%), Gaps = 18/270 (6%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            ++V  S     +    +     +L  + S +R   +   +D+  +   + +    +   
Sbjct: 95  RATVDASEARVTSAQAKLAEIEAELARQPSQIRHAQAVVDEDIANVD--YARLDADRYRR 152

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            +      +   +         +  R  ++   E+       L+      E        E
Sbjct: 153 LRHNGNASQQNAQQAAANASALDARREADQASLESVRHQTQVLEARRAGAEAALAQARAE 212

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
           + +      +     I +P  G +   Q+     +A+    LM IVP  +  Y+ A    
Sbjct: 213 LEQ---ARLSLSHTRITAPRDGIVAQ-QAGRVGAWAEAGGALMAIVPTEE-IYVTANYRE 267

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--------DPIISQQDNNLQTQEYYE 388
             I  V+ G   T+    Y  +     +  ++ +         PI     +   T+    
Sbjct: 268 VDITEVRVGQPVTISVDAYPGLT---LEGHVDSLAPATGTTFSPISHDDASGNFTKIVQR 324

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           + ++I   A       L+ G   E      
Sbjct: 325 LPVRIAIEAGQSGIDRLKVGLSVETTIHTD 354



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 47/125 (37%), Gaps = 2/125 (1%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P  +    LL +I +   +    LL  +   +++ ++  + +   I    +G I    VE
Sbjct: 18  PRLIGTTALLCVILVGVFLIAPALLHYDEVWTNNAKL--DADYTVISPRVAGDIVAVHVE 75

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +   + +G  L+  +  +    +D  +  + + +  +   ++ L    ++    +   + 
Sbjct: 76  DHEAVSRGDALIDIDPRDYRATVDASEARVTSAQAKLAEIEAELARQPSQIRHAQAVVDE 135

Query: 134 REEQL 138
               +
Sbjct: 136 DIANV 140


>gi|229175278|ref|ZP_04302793.1| multidrug resistance protein A [Bacillus cereus MM3]
 gi|228608110|gb|EEK65417.1| multidrug resistance protein A [Bacillus cereus MM3]
          Length = 217

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   TIV + + +++ + 
Sbjct: 57  KLTDWKAEVGKNYNEN-----DKLGAVTVAAANGEQTVDVTIPQNATIVQSNA-TTNAFV 110

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 111 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LSGKVEQVGL 166

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 167 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVSVRIH 216


>gi|154490029|ref|ZP_02030290.1| hypothetical protein PARMER_00258 [Parabacteroides merdae ATCC
           43184]
 gi|154089471|gb|EDN88515.1| hypothetical protein PARMER_00258 [Parabacteroides merdae ATCC
           43184]
          Length = 420

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/305 (13%), Positives = 102/305 (33%), Gaps = 79/305 (25%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +   G++L +  ++ + +   G +++  +E G+Q+  G  +L                  
Sbjct: 67  IRVIGQVLPD-RIIYLDAIEGGRVEERLIEEGAQVRAGDVIL------------------ 107

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                 +      +  L ++ D+  +  E R  +L                         
Sbjct: 108 -----RLSNPLLNIGILQSEADLAYQENELRNTRL------------------------- 137

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                    S+    L L+     L   L   ++     + L++KN +++ D  Q E   
Sbjct: 138 ---------SMEQEHLRLKQDRIGLSKELVQKERRFRQYERLYKKNLLAREDYLQAEEDY 188

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +  +L             ++E   + +L  ++ L+ +  ++   +++ A    +L   
Sbjct: 189 EAALGQL-----------AVVDERIKQDDLFRSSQLQSLDENIRNMKKSLALVRGRL--- 234

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               E   + +P+ G  + N          Q + + +++  +    + AK+    ++ V 
Sbjct: 235 ----ENLKVKAPVDGQ-LGNLEAQIGQSIAQGERIGQVI--TPELKVEAKIDEHYVERVM 287

Query: 344 KGYTA 348
            G  A
Sbjct: 288 PGLPA 292


>gi|163803860|ref|ZP_02197706.1| putative secretion protein [Vibrio sp. AND4]
 gi|159172335|gb|EDP57216.1| putative secretion protein [Vibrio sp. AND4]
          Length = 341

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 85/259 (32%), Gaps = 24/259 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +  +        E+++ Q+++         S+ +   +     + ++ + +   
Sbjct: 50  RAKILSVAPQVQGQVVTVEAKDFQVINKGDLLLKIDSRPYLLEVKQAKAAYQLAVQQHDV 109

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 +        R+ L+  Q +     +L ++   S  DL+  +  +  +   L + 
Sbjct: 110 ADKQVTEAVAGLDAARSNLTEAQVEYKRTNSLVQRKLASAQDLDTAKNKLANAQASLEQA 169

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +  + +  E   EA +      +                   L   E       I 
Sbjct: 170 RATVEKAIANRGEEGAEAAVVQQAAAQ-------------------LAQAELNLSYTDIT 210

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ G      + +  +     Q L  ++      ++RA      + H+K G  A V   
Sbjct: 211 SPVDGIAGEINTHT-GSVVGIGQTLFPVI-VKDSYWVRANFKETDLTHIKAGMHAEVVID 268

Query: 354 HYADIREKKFKAIIEKIDP 372
            Y D+    + A +E++ P
Sbjct: 269 MYPDL---VWDAKVEELSP 284


>gi|56708319|ref|YP_170215.1| HlyD family secretion protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670790|ref|YP_667347.1| HlyD family secretion protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|224457439|ref|ZP_03665912.1| HlyD family secretion protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370802|ref|ZP_04986807.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875139|ref|ZP_05247849.1| hlyD family secretion protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604811|emb|CAG45890.1| HlyD family secretion protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110321123|emb|CAL09273.1| HlyD family secretion protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|151569045|gb|EDN34699.1| hypothetical protein FTBG_00612 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841138|gb|EET19574.1| hlyD family secretion protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159550|gb|ADA78941.1| HlyD family secretion protein [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 340

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 64/206 (31%), Gaps = 13/206 (6%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL- 230
           +   L      +K    +  L+  Q+ +    N+ + N             +    ++L 
Sbjct: 95  KDYQLKVAQANSKIIQTKGQLAIAQEQV----NVAKSNLTKAQSSLDTATSMADRYIKLY 150

Query: 231 RENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +++    ++  ++IN+       +   Y  LK+    +E  +                  
Sbjct: 151 KDDAGSLQDAQKYINQKIQAQKAKDEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLG 210

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             T+++P  G +   + +         Q L   +  +K  +I A      +  +K G   
Sbjct: 211 YTTLIAPDDGYVSNLKLY-KGQLVSPEQALFGFI-DNKKWWIDANFKETDLDRIKPGQKV 268

Query: 349 TVRFPHYADIREKKFKAIIEKIDPII 374
            +    Y+      +   ++ I    
Sbjct: 269 EIELDMYSHS----YAGKVDSISYAT 290



 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 57/185 (30%), Gaps = 10/185 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIK 104
              +++ I     G I+K  + N   + +   L+  +         +    I   K  + 
Sbjct: 57  VNADIISISPKVGGYIEKVYIHNNQFVHKDDKLVQIDPKDYQLKVAQANSKIIQTKGQLA 116

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +  ++  KS L    +  D    +   R  +L            K  N  I +  ++ 
Sbjct: 117 IAQEQVNVAKSNLTKAQSSLDT-ATSMADRYIKLYKDDAGSLQDAQKYINQKIQA-QKAK 174

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIV 223
               + ++   L     + +    +    +   +L     +  +   VS   L + + + 
Sbjct: 175 DEAYSSLKQALLQVEIAKAQIGAAKLSYDNANLNLGYTTLIAPDDGYVSNLKLYKGQLVS 234

Query: 224 YKSTL 228
            +  L
Sbjct: 235 PEQAL 239


>gi|32476453|ref|NP_869447.1| AcrA/AcrE family protein- secreted protein [Rhodopirellula baltica
           SH 1]
 gi|32446998|emb|CAD78904.1| probable AcrA/AcrE family protein-putative secreted protein
           [Rhodopirellula baltica SH 1]
          Length = 321

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 88/239 (36%), Gaps = 33/239 (13%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E K + L A    + KD    + L    A S  +L ++    Y    E+++ + E    L
Sbjct: 112 EEKEAQLNAANEVNLKDARNNEELARAEAESFRELYEKGATPYY---EMKKKVLEAIRAL 168

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I+             L E+ + + + Q  +  + S+  I E   +++ I +   G I 
Sbjct: 169 LRID-------------LAEMQKKIAEAQ--YIAKRSEREIAEFELDRRRITALFDGYI- 212

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTY---IRAKVTPKQIQHVKKGYTATVR-FPHYAD 357
             +      + Q   P+  +V   ++     I A  +      V  G    VR F     
Sbjct: 213 EMRIAQLGEWVQPGSPIATLVQLDRVRVGGDIDALASN---GAVHAGAPVLVRVFNTADP 269

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +  + +A +  +   +         Q+ Y + + + +   S+ N  ++ G  AE++F 
Sbjct: 270 DQNFEVRAPLGFVSSEVD-------GQKRYRIWVDVDNQKDSNGNWMIKPGMEAEIIFQ 321



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 44/139 (31%), Gaps = 6/139 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  +E G  + +   L   +D      ++ KK   K  + +   E +  D  NN+ 
Sbjct: 75  GKLVELPIEEGMTVAKDDLLALVDDTSARLALEFKKAEEKEAQLNAANEVNLKDARNNEE 134

Query: 125 DVLEKAFESRE------EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               +A   RE          +   K       +    ++ + + +       +      
Sbjct: 135 LARAEAESFRELYEKGATPYYEMKKKVLEAIRALLRIDLAEMQKKIAEAQYIAKRSEREI 194

Query: 179 LDLENKSSLLRALLSSHQK 197
            + E     + AL   + +
Sbjct: 195 AEFELDRRRITALFDGYIE 213


>gi|116625538|ref|YP_827694.1| multidrug resistance efflux pump-like protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116228700|gb|ABJ87409.1| Multidrug resistance efflux pump-like protein [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 631

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 81/232 (34%), Gaps = 21/232 (9%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
             + + +    L+   ++ +    RA L+  Q   T+   L +     +      +R   
Sbjct: 96  SERQSALEEARLSVQSVDEQIKKARADLAIQQSQDTVT--LLKTRYNVRRAQLDVQRNPI 153

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            + ++ ++N+   +   R + +L  +          +++  +EQ  R+  D   +L    
Sbjct: 154 IAEIDGKKNVLTLEQQKRALQQLETDIQARKDQADSQMAVLIEQRNRSLIDVQREL---- 209

Query: 285 KTREQKTILSPIAGTI-------------VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           +   Q  +L+P+ G +                      +  Q   P+  ++       + 
Sbjct: 210 QRIAQCKMLAPMTGLVSVRQNRAGNFNFGQQMPDIREGDTLQPGMPVADVL-DLSELEVW 268

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIRE-KKFKAIIEKIDPIISQQDNNLQ 382
           AKV      ++K+G  A ++     D R   K KA+       +   D + +
Sbjct: 269 AKVGELDRANLKEGQDAMLQLDAIPDKRFNGKIKAMSGTASSDVFSGDPSKK 320


>gi|188580465|ref|YP_001923910.1| secretion protein HlyD family protein [Methylobacterium populi
           BJ001]
 gi|179343963|gb|ACB79375.1| secretion protein HlyD family protein [Methylobacterium populi
           BJ001]
          Length = 325

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 74/253 (29%), Gaps = 22/253 (8%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S++    ++ +        + +    +A L+  ++D    + L E+ A +          
Sbjct: 84  SIRNVDAQIEAQKAQVEAAKAQVETAQAALTFAEEDADRYRKLAERGAGTIQQSQSSTST 143

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           + +    L           + I  L  +     A   +  ++                  
Sbjct: 144 LEQRQASLANAKANVVAAQKQIGSLQAQRASAEAQQAQAEAQR---------------DQ 188

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                   T+ +   G +V     +   YAQ  Q L   VP     ++ A     QI  +
Sbjct: 189 ARLNLGYTTVTAAQGGRVVRLTG-AVGEYAQAGQSLSMFVP--DEIWVTANYKETQITDM 245

Query: 343 KKGYTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           + G    +    Y + R   +  ++        S       T  Y +V  +I      DN
Sbjct: 246 RPGQPVDITIDAYPNRRITGRIASVQPGSGTAFSLLPAQNATGNYVKVTQRIPVKILVDN 305

Query: 402 ---NIELRNGFPA 411
              ++ +  G   
Sbjct: 306 WPSDVAIGPGMSV 318



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/144 (11%), Positives = 45/144 (31%), Gaps = 9/144 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT-------DLIDLKKVSIK 104
            +     +     G +    V +   +  G  L   +  +           +   + SI+
Sbjct: 27  VDARSFTVAPKVGGYVVAVPVTDNQHVRAGDTLFQIDPRDYRVALEQAEAQVQAAQASIR 86

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           N+   I+ +K+ ++    + +  + A    EE    +          +      S   +L
Sbjct: 87  NVDAQIEAQKAQVEAAKAQVETAQAALTFAEEDADRYRKLAERGAGTIQQSQ--SSTSTL 144

Query: 165 KMKLTRMRSIYLNRLDLENKSSLL 188
           + +   + +   N +  + +   L
Sbjct: 145 EQRQASLANAKANVVAAQKQIGSL 168


>gi|110635661|ref|YP_675869.1| RND family efflux transporter MFP subunit [Mesorhizobium sp. BNC1]
 gi|110286645|gb|ABG64704.1| efflux transporter, RND family, MFP subunit [Chelativorans sp.
           BNC1]
          Length = 377

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 88/262 (33%), Gaps = 28/262 (10%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + +V  ++  ++   R+I+++     +K+  L A ++   ++L     + E + V + DL
Sbjct: 50  LKTVQVAVPPRVEHARTIHVSGRTEADKNVNLAARVAGIVEEL----PVEEGSRVKEGDL 105

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
                 + +   E +E             E    A    +      S  L+  +   A  
Sbjct: 106 ------ILRLENEGKEAAVTSAQQTLAHREAEFAAAERLSKSGNLASLQLDVARANLAAA 159

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            S L   +   ++ ++ +P    +   Q       A Q   +  ++          +V+ 
Sbjct: 160 RSALEQAKAELDRVSVRAPFDAVVDKIQV-EKGTAAMQGAEVATLLKLD-PIVAAGEVSE 217

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           + +  ++ G  A VR      +  +     I  +    S Q         Y + +   + 
Sbjct: 218 RDLGTIRPGDKAEVRL-----VNGETLSGTIRHVSRAASPQTRT------YRIEVVAPNP 266

Query: 397 AFSDNNIELRNGFPAEVLFTAK 418
              DN I    G  AE+    +
Sbjct: 267 ---DNGIP--AGMTAEISIKTE 283



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 45/114 (39%), Gaps = 4/114 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+++  VE GS++ +G  +L  E+      +   + ++     H + E +A + L+   
Sbjct: 87  GIVEELPVEEGSRVKEGDLILRLENEGKEAAVTSAQQTL----AHREAEFAAAERLSKSG 142

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           ++     +     L           +++    + + + ++  K+   +     +
Sbjct: 143 NLASLQLDVARANLAAARSALEQAKAELDRVSVRAPFDAVVDKIQVEKGTAAMQ 196


>gi|325845578|ref|ZP_08168864.1| conserved domain protein [Turicibacter sp. HGF1]
 gi|325488362|gb|EGC90785.1| conserved domain protein [Turicibacter sp. HGF1]
          Length = 430

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 70/378 (18%), Positives = 121/378 (32%), Gaps = 65/378 (17%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V  SG ++        K    G      V +G  +  G  L+T+ + E T  I+     I
Sbjct: 51  VILSGSVIPSQYTTFTKDVTKGEEMTINVSHGDSVQVGDVLITYHNAEITSQINDLNEQI 110

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             L              N K   L        + +   +       SK+     S V + 
Sbjct: 111 ATL--------------NAKKAKLSSEGTPAAKSVNKQIKSIEDQKSKLQQETKSQVNQI 156

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           LK     ++       D EN ++L+  L +             E   V +N+L   E  +
Sbjct: 157 LKKLDELVKQKNELNPDDENDAALVADLDAQI-----------ESCYVQKNEL---EYNL 202

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                E    I + ++              + ++  +E    L++   T   E +KL   
Sbjct: 203 PGQVAEFDTQISDLRS--------------QLSDEDQETFNSLDEQINTLVKEKTKLEEK 248

Query: 284 EKTREQKTILSPIAGTI--VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           E  +E    ++P +G +  V + S  +    +   P           Y+ A V  K    
Sbjct: 249 EYIKE----VAPFSGVVSLVEDSSSENPVVLKLKSP---------DFYVTASVGEKDYAK 295

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           +  G  A             K   I E  DP+ +   +   T   Y V + + D +    
Sbjct: 296 ISVGMEAETLLIATNKTVSGKITFIDE--DPLQATNTSGTSTSSTYLVKVSLDDQS---- 349

Query: 402 NIELRNGFPAEVLFTAKN 419
             EL NG+ A+V     +
Sbjct: 350 --ELVNGYQAQVSIKLAD 365


>gi|62317668|ref|YP_223521.1| HlyD family secretion protein [Brucella abortus bv. 1 str. 9-941]
 gi|83269651|ref|YP_418942.1| secretion protein HlyD [Brucella melitensis biovar Abortus 2308]
 gi|148558043|ref|YP_001257439.1| HlyD family secretion protein [Brucella ovis ATCC 25840]
 gi|189022918|ref|YP_001932659.1| Secretion protein HlyD [Brucella abortus S19]
 gi|225686266|ref|YP_002734238.1| secretion protein HlyD family protein [Brucella melitensis ATCC
           23457]
 gi|254691166|ref|ZP_05154420.1| secretion protein HlyD family protein [Brucella abortus bv. 6 str.
           870]
 gi|254695530|ref|ZP_05157358.1| secretion protein HlyD family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698949|ref|ZP_05160777.1| secretion protein HlyD family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254699717|ref|ZP_05161545.1| secretion protein HlyD family protein [Brucella suis bv. 5 str.
           513]
 gi|254706025|ref|ZP_05167853.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M163/99/10]
 gi|254711675|ref|ZP_05173486.1| secretion protein HlyD family protein [Brucella pinnipedialis
           B2/94]
 gi|254732396|ref|ZP_05190974.1| secretion protein HlyD family protein [Brucella abortus bv. 4 str.
           292]
 gi|256015246|ref|YP_003105255.1| HlyD family secretion protein [Brucella microti CCM 4915]
 gi|256029691|ref|ZP_05443305.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M292/94/1]
 gi|256111635|ref|ZP_05452625.1| secretion protein HlyD family protein [Brucella melitensis bv. 3
           str. Ether]
 gi|256157844|ref|ZP_05455762.1| secretion protein HlyD family protein [Brucella ceti M490/95/1]
 gi|256253194|ref|ZP_05458730.1| secretion protein HlyD family protein [Brucella ceti B1/94]
 gi|256256352|ref|ZP_05461888.1| secretion protein HlyD family protein [Brucella abortus bv. 9 str.
           C68]
 gi|256262598|ref|ZP_05465130.1| secretion protein HlyD [Brucella melitensis bv. 2 str. 63/9]
 gi|260544903|ref|ZP_05820724.1| secretion protein HlyD [Brucella abortus NCTC 8038]
 gi|260756766|ref|ZP_05869114.1| secretion protein HlyD family protein [Brucella abortus bv. 6 str.
           870]
 gi|260760197|ref|ZP_05872545.1| secretion protein HlyD family protein [Brucella abortus bv. 4 str.
           292]
 gi|260763435|ref|ZP_05875767.1| secretion protein HlyD family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882582|ref|ZP_05894196.1| secretion protein HlyD family protein [Brucella abortus bv. 9 str.
           C68]
 gi|261215921|ref|ZP_05930202.1| secretion protein HlyD family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|261220302|ref|ZP_05934583.1| secretion protein HlyD family protein [Brucella ceti B1/94]
 gi|261313465|ref|ZP_05952662.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261319299|ref|ZP_05958496.1| secretion protein HlyD family protein [Brucella pinnipedialis
           B2/94]
 gi|261750183|ref|ZP_05993892.1| secretion protein HlyD family protein [Brucella suis bv. 5 str.
           513]
 gi|265986701|ref|ZP_06099258.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M292/94/1]
 gi|265993110|ref|ZP_06105667.1| secretion protein HlyD family protein [Brucella melitensis bv. 3
           str. Ether]
 gi|265996351|ref|ZP_06108908.1| secretion protein HlyD family protein [Brucella ceti M490/95/1]
 gi|297249712|ref|ZP_06933413.1| HlyD family secretion protein [Brucella abortus bv. 5 str. B3196]
 gi|62197861|gb|AAX76160.1| HlyD family secretion protein [Brucella abortus bv. 1 str. 9-941]
 gi|82939925|emb|CAJ12939.1| Secretion protein HlyD [Brucella melitensis biovar Abortus 2308]
 gi|148369328|gb|ABQ62200.1| HlyD family secretion protein [Brucella ovis ATCC 25840]
 gi|189021492|gb|ACD74213.1| Secretion protein HlyD [Brucella abortus S19]
 gi|225642371|gb|ACO02284.1| secretion protein HlyD family protein [Brucella melitensis ATCC
           23457]
 gi|255997906|gb|ACU49593.1| HlyD family secretion protein [Brucella microti CCM 4915]
 gi|260098174|gb|EEW82048.1| secretion protein HlyD [Brucella abortus NCTC 8038]
 gi|260670515|gb|EEX57455.1| secretion protein HlyD family protein [Brucella abortus bv. 4 str.
           292]
 gi|260673856|gb|EEX60677.1| secretion protein HlyD family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676874|gb|EEX63695.1| secretion protein HlyD family protein [Brucella abortus bv. 6 str.
           870]
 gi|260872110|gb|EEX79179.1| secretion protein HlyD family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260917528|gb|EEX84389.1| secretion protein HlyD family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260918886|gb|EEX85539.1| secretion protein HlyD family protein [Brucella ceti B1/94]
 gi|261298522|gb|EEY02019.1| secretion protein HlyD family protein [Brucella pinnipedialis
           B2/94]
 gi|261302491|gb|EEY05988.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261739936|gb|EEY27862.1| secretion protein HlyD family protein [Brucella suis bv. 5 str.
           513]
 gi|262550648|gb|EEZ06809.1| secretion protein HlyD family protein [Brucella ceti M490/95/1]
 gi|262763980|gb|EEZ10012.1| secretion protein HlyD family protein [Brucella melitensis bv. 3
           str. Ether]
 gi|263092384|gb|EEZ16637.1| secretion protein HlyD [Brucella melitensis bv. 2 str. 63/9]
 gi|264658898|gb|EEZ29159.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M292/94/1]
 gi|297173581|gb|EFH32945.1| HlyD family secretion protein [Brucella abortus bv. 5 str. B3196]
 gi|326410625|gb|ADZ67689.1| Secretion protein HlyD [Brucella melitensis M28]
 gi|326553917|gb|ADZ88556.1| Secretion protein HlyD [Brucella melitensis M5-90]
          Length = 314

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/396 (12%), Positives = 114/396 (28%), Gaps = 85/396 (21%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M+LL +I  +  +  +            GE +    +   +      ++   V+ G ++ 
Sbjct: 1   MSLLCVIPFVSSLFAACGTQSLAVGYVEGEFVQLAPLQVAQ------VRDIAVKRGDRVE 54

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P+ T ED +                  I   ++       +  +       R E++ 
Sbjct: 55  AGEPIATVEDTD----------------ARIAVAQAEAALAQAQAQLANLQVGKRPEEIA 98

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                                    LE      RA     Q+ L
Sbjct: 99  V----------------------------------------LEAAVRSARAQADDAQRTL 118

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++L  +   +Q  L+     +  +   + ++       +  +    +E         
Sbjct: 119 LRTRDLARRGVATQAQLDDAATQLEVAEAAIGQSTANL--AVGKLPARPEEIKA------ 170

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                     +       ++L   +  R Q+TI +P AG I      +  + A  S P++
Sbjct: 171 ---------AENAVKSAEAQLQTAKWQRAQRTIEAPAAGRITDV-VRNPGDIAGPSAPVL 220

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++P      ++  +  ++   V  G         + D      +A +  + P       
Sbjct: 221 TMLP-DGAVKLKVYIPEERFSDVAVGSV----LSVHCDGCAPGLQARVSYVSPDPEFTPP 275

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + + E  + ++ + +    D    L+ G   +V  
Sbjct: 276 VIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 311


>gi|50122433|ref|YP_051600.1| multidrug resistance protein A [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612959|emb|CAG76410.1| multidrug resistance protein A [Pectobacterium atrosepticum
           SCRI1043]
          Length = 391

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 86/253 (33%), Gaps = 32/253 (12%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +L   + +   + +N    +    L +  L+  Q DL+  + L   NA+ + ++      
Sbjct: 108 ALANSVRQTHQLIINSKQYQANIELRQTELNKAQSDLSRREALGNANAIGREEVQHARDA 167

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           V  +   L     + +     I +   E          E+                    
Sbjct: 168 VATAKAALEVARQQYQANQAMILDTPLEKQPAIQQASVEMRDAWL--------------- 212

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                ++  I+SPI G I   +S         +  LM +VP +   ++ A     Q+ ++
Sbjct: 213 ---ALQRTKIVSPIDGYISR-RSVQIGARISSTSALMAVVPANH-LWVDANFKETQLANM 267

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILK 392
           + G  ATV    Y D     ++  +  +D          P  +   N ++  +   V ++
Sbjct: 268 RIGQPATVIADIYGDDV--VYQGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIE 325

Query: 393 ITDLAFSDNNIEL 405
           I     +++ + +
Sbjct: 326 IDPKQVAEHPLRI 338



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN------ 105
              N ++I    +G +    V+N   + QG  L+  +  +     +  K ++ N      
Sbjct: 58  VAGNQIQIMPQVTGSVTHVNVDNTDFVKQGQVLVELDPTDALQTFERAKTALANSVRQTH 117

Query: 106 -LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    ++ ++    + +  +     RE                      +     +
Sbjct: 118 QLIINSKQYQANIELRQTELNKAQSDLSRREALGNANAIGREEVQHARDAVATAKAALEV 177

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +  +     +    LE + ++ +A +      L + + 
Sbjct: 178 ARQQYQANQAMILDTPLEKQPAIQQASVEMRDAWLALQRT 217


>gi|304409632|ref|ZP_07391252.1| secretion protein HlyD family protein [Shewanella baltica OS183]
 gi|307303990|ref|ZP_07583743.1| secretion protein HlyD family protein [Shewanella baltica BA175]
 gi|304352150|gb|EFM16548.1| secretion protein HlyD family protein [Shewanella baltica OS183]
 gi|306912888|gb|EFN43311.1| secretion protein HlyD family protein [Shewanella baltica BA175]
          Length = 379

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 61/179 (34%), Gaps = 3/179 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E + + + +P   +I +  V  G Q+  G  LLT +       + L++  ++  +  +
Sbjct: 85  TVERDRLTLTAPVGELITQVNVVEGQQVKAGEVLLTLDSTSANARLALRQAELEQAKAKL 144

Query: 111 --DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF-NYGISSVYRSLKMK 167
                 + L+ +     VL+ A  S +E    F        +KV     + +   +    
Sbjct: 145 SEAVTGARLEDIERAKAVLDGANASVKEAQRAFERTNRLYATKVLSQADLDTARAARDTS 204

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           L +      +   LEN +   +   +             E+ A++   L      V  +
Sbjct: 205 LAKQAEAEQSLRLLENGTRSEQLEQAKAAVAAASASVAIEQKALADLSLVAARDAVVDT 263



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 96/344 (27%), Gaps = 42/344 (12%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           ++ G  LL            L  V    L     T  + +  L  + +V+E       E 
Sbjct: 63  VVLGCLLLQLAACSKESPSVLGTVERDRL-----TLTAPVGELITQVNVVEGQQVKAGEV 117

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL       +    +    +      L   +T  R   + R   +       A +   Q+
Sbjct: 118 LLTLDSTSANARLALRQAELEQAKAKLSEAVTGARLEDIERA--KAVLDGANASVKEAQR 175

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                  L+    +SQ DL+        S  +  E     + +                 
Sbjct: 176 AFERTNRLYATKVLSQADLDTARAARDTSLAKQAEAEQSLRLLENGTR------------ 223

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                S  LEQ +   A   + + I +K     ++++     +         +       
Sbjct: 224 -----SEQLEQAKAAVAAASASVAIEQKALADLSLVAARDAVVDTLPWR-VGDRIAAGTQ 277

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------D 371
           L+ ++      Y+R  +    +  VK G    +R       RE      +  I       
Sbjct: 278 LIGLLASEDP-YVRVYLPATWLGRVKAGDKVNIRVDG----REMPIAGTVRNIRSQPAYT 332

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           P  +  + +     Y      +TD+  S    +L  G    V  
Sbjct: 333 PFYALNERDRARLMY------LTDITISAAGQDLPTGMALAVEL 370


>gi|296103279|ref|YP_003613425.1| putative HlyD family secretion protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057738|gb|ADF62476.1| putative HlyD family secretion protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 331

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 79/215 (36%), Gaps = 17/215 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQ 270
           +QN   +Q+ +    T+    ++   ++           A  + + Y      +D+ Q +
Sbjct: 126 AQNFYARQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLSQYHTGNRPQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E      T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 185 ASLEQAQAQLAQAELDLHDTTLVAPSDGTLMT-RAVEPGSMLNAGSTVLTLS-LTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA +    +  ++ G        +     +K +   +  + P       + +  +L+T  
Sbjct: 243 RAYIDEPNLGQMQPGRE---LLLYTDGRPDKPYHGKVGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            Y + + +TD   +     LR G P  V   +   
Sbjct: 300 VYRLRIIVTDADDA-----LRQGMPVTVKVNSGER 329



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/133 (10%), Positives = 37/133 (27%), Gaps = 11/133 (8%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G  I  G  L   +     + +   K  +   +   D   +        
Sbjct: 51  GGRLASLNVDEGDTIKTGQTLGMLDKAPYENALMQAKAGVSVAQAQYDLMLAGY------ 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                +  E  +        +     ++ F      +++S  +    + +   +R   + 
Sbjct: 105 -----RDEEIAQAAAAVKQAQAAYDYAQNFYARQQGLWKSRTISANDLENARSSRDQAQA 159

Query: 184 KSSLLRALLSSHQ 196
                +  LS + 
Sbjct: 160 TLKSAQDKLSQYH 172


>gi|153829116|ref|ZP_01981783.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148875374|gb|EDL73509.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 366

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 20/183 (10%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLE--QNQRTFADEMSKLTILEKTREQKTI 292
            + +     +     E N   A   K +  ++          D  S L+ +++  +   +
Sbjct: 120 AQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQV 179

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +         ++     P+  I+       I A V+ + IQHV+    A +RF
Sbjct: 180 RAPFDGVVETLPI-EKGDFVGIGDPVASII-DLHKLVIEADVSERHIQHVQLEQAARIRF 237

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                I   + +  +  I  + S   N       + + +++ +   +     +  G  AE
Sbjct: 238 -----IDGTQTQGKVRYISRLSSPATNT------FAIEVEVDNPQQA-----IPAGVSAE 281

Query: 413 VLF 415
           V  
Sbjct: 282 VEL 284



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I + ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIELYGRTAPDRQAK-IGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 127 AQLKVRQ----QEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 183 FDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLEQAA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGTQTQGKVRYISRL 253


>gi|150375877|ref|YP_001312473.1| hypothetical protein Smed_3727 [Sinorhizobium medicae WSM419]
 gi|150030424|gb|ABR62540.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
          Length = 410

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 57/344 (16%), Positives = 120/344 (34%), Gaps = 17/344 (4%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I +P  G I K     G+ + +G  L T  +          +  + +LR    T    +
Sbjct: 44  VINAPVDGEIDKAPPRIGTPVKEGETLATISNERVN------RAVLASLRTDHRTALERV 97

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             L  + D L +  +    +L  F     ++  +        V  S   ++   R     
Sbjct: 98  AALRRERDELVRLRDDLAGRLDIFRNATIASLERELQILQKRVEVSRAQEVVA-RVDLDR 156

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R DLE+K    R ++ S +          E + ++   L ++   V K    + +  ++ 
Sbjct: 157 RQDLESKGIFTRKMVESAEAAGAAAGGELEISNLTVELLQERLSAVRKGIFIVGDGQNDV 216

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +  +E+      +    + E     +Q  +  A+E  ++  LE      TI SP+ 
Sbjct: 217 PYSRQRQDEVIVRI-HDLNTRIAENETRAKQTDQQIAEEERRVLNLESA----TIPSPLD 271

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +      S SN    S+ +M+I+   +  ++   V       +  G  A VR     D
Sbjct: 272 GVVWTRNVVSGSNVVLNSE-VMRIL-DCRDLFVDILVPEVDYDEIYPGRDAEVRLFGRGD 329

Query: 358 IREKKFKAIIEK---IDPIISQQDNNLQTQEYYEVILKITDLAF 398
           + + + +A+      ++      +     +    + + +   A 
Sbjct: 330 VFKGRVQAVKGSSAVVEKDSLAANEPEADERNARIRVTLAPSAL 373


>gi|300694059|ref|YP_003750032.1| cation efflux system protein, czcb or cusb protein [Ralstonia
           solanacearum PSI07]
 gi|299076096|emb|CBJ35407.1| putative cation efflux system protein, putative CzcB or CusB
           protein [Ralstonia solanacearum PSI07]
          Length = 388

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 57/190 (30%), Gaps = 22/190 (11%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA------DEMSKLTILEKTR 287
           I  QK  L  +N           +   +  + ++              E++++       
Sbjct: 138 ISAQKEYLLALNTARTLQGSNMKDLQDDAQQTVQSAAGRLRVLGLTDAEIAQIRARGTPA 197

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           E   + +PI+GTI   ++     +       M IV  ++  +    V    I  V+ G  
Sbjct: 198 EHLILRAPISGTIAR-RNMDPGAFLNVGDAFMSIV-DTRALWFTGNVYEHDIARVRIGQP 255

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            T+R   Y D     F   +  I P I    + L  +               + +  LR 
Sbjct: 256 ITLRAAAYPDR---AFTGTVSFIAPNIDPATHTLTVRS-----------DVPNPDGLLRP 301

Query: 408 GFPAEVLFTA 417
              +      
Sbjct: 302 EMYSTARIQT 311


>gi|283784554|ref|YP_003364419.1| hypothetical protein ROD_07951 [Citrobacter rodentium ICC168]
 gi|282948008|emb|CBG87572.1| putative membrane protein [Citrobacter rodentium ICC168]
          Length = 331

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/354 (12%), Positives = 108/354 (30%), Gaps = 88/354 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G  I  G  L   +     +               +   K+ +     +
Sbjct: 51  GGRLASLTVDEGDAIRAGQILGELDHAPYQN--------------ALMQAKAGVSVAKAQ 96

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           YD++   +  REE++                                             
Sbjct: 97  YDLMLAGY--REEEIA----------------------------------------QAAA 114

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                +A     Q      + L++   +S NDL         +     + +   K+    
Sbjct: 115 SVRQAQAAYDYAQNFYNRQQGLWKSRTISANDL-------ENARSSRDQALATLKSAQDK 167

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +N+       +          D+ Q + +     ++L   E   +  T+++P +GT++  
Sbjct: 168 LNQYRSGNREQ----------DIAQAKASLEQAQAQLAQAELDLQDTTLVAPSSGTLLT- 216

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++    +       ++ +   ++  ++RA V  + +   + G    +   +     +K +
Sbjct: 217 RAVEPGSMLNAGSTVLTLS-LTRPVWVRAYVDERNLNQARPGREILL---YTDGRPDKPY 272

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              I  + P       + +  +L+T   Y + + +TD   +     LR G P  
Sbjct: 273 HGKIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDA-----LRQGMPVT 321


>gi|168701630|ref|ZP_02733907.1| secretion protein HlyD family protein [Gemmata obscuriglobus UQM
           2246]
          Length = 350

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/379 (11%), Positives = 101/379 (26%), Gaps = 87/379 (22%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISV----------SSSGEILNEDNVVEIK 60
           R   +      L  +  ++ +  W      +  V            +G +     +  + 
Sbjct: 5   RFSVSGSLTAVLFVLAPLVAVGWWLARPKADAGVPPPTSSELDVVCTGRVDGSHPLAALS 64

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
               G + +  V  G  +  G PLL   D       +  K  ++  +  +          
Sbjct: 65  PTVPGKVAEVLVSEGLTVDAGAPLLRLAD-------ESLKFRVEEAKAALA--------- 108

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                            + D   +     +K+    ++    ++     R  +      +
Sbjct: 109 -----------------VADLEIEAAGAEAKLHPQRVAGQKLAIASAQDRTATARRLLDE 151

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L           +   +    ++ L    AV  + L +        +  LR    E K +
Sbjct: 152 LRAAKPFGTITAADIIRAEAEVRQLERLEAVEADRLTEL----NALSPALRVRAAEAKKV 207

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              +                                   L  +E+      +++P AGT+
Sbjct: 208 QARVA----------------------------------LNQVEQAVRDCVLVAPSAGTV 233

Query: 301 VYNQSFSSSNYAQQS--QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           +     S           P +   P      +RA++  + I  V+ G  ATV        
Sbjct: 234 LRVNV-SVGESVLPGGGAPALLFRPAG-PLVVRAELEQEFIGRVRPGMRATV--TDETRA 289

Query: 359 REKKFKAIIEKIDPIISQQ 377
               +   + ++   +S++
Sbjct: 290 DAPTWTGRVVRVGAFVSRR 308


>gi|126667502|ref|ZP_01738473.1| periplasmic component of efflux system [Marinobacter sp. ELB17]
 gi|126628094|gb|EAZ98720.1| periplasmic component of efflux system [Marinobacter sp. ELB17]
          Length = 376

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I++ VS++G +    N V++ +  SG++    V  G QI +   L   +       +D  
Sbjct: 47  IDVLVSATGVLEPS-NFVDVGAQVSGLLDVIHVRVGEQISKDQLLAEIDPTIYLARVDAN 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +KN +  +   K+ L   + ++      F  RE+       +            ++ 
Sbjct: 106 RAQLKNQQAQLADRKAQLTLADIQFQRQTNLF--REDATTRENLQIAEASLASAKAQLAM 163

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   L+   + +R+   N
Sbjct: 164 LQAQLEQTASTLRAEEAN 181



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 68/212 (32%), Gaps = 19/212 (8%)

Query: 213 QNDLNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLEFANY-LKEISRDLEQNQ 270
           +  L  Q+  +     +L   +I  Q+       +     NL+ A   L      L   Q
Sbjct: 106 RAQLKNQQAQLADRKAQLTLADIQFQRQTNLFREDATTRENLQIAEASLASAKAQLAMLQ 165

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP---LMKIVPHSKL 327
                  S L   E   +   I S + GT+V   +         SQ    LM+I      
Sbjct: 166 AQLEQTASTLRAEEANLDYARIYSTMEGTVVSITAR-QGQTLNTSQQAPVLMRIA-DLSN 223

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +RA+V+   +  +  G      F    +   K+    ++ I+P     +N +    ++
Sbjct: 224 MKVRAQVSEADVGRLAPGDKVY--FTTLGE-PGKQIYGQLDYIEPTPEVINNVVLYNAFF 280

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            V          +    L     A+V F  + 
Sbjct: 281 SV---------PNEAGRLLPSMTAQVFFVVEQ 303


>gi|114799816|ref|YP_760354.1| RND family efflux transporter MFP subunit [Hyphomonas neptunium
           ATCC 15444]
 gi|114739990|gb|ABI78115.1| efflux transporter, RND family, MFP subunit [Hyphomonas neptunium
           ATCC 15444]
          Length = 447

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 57/138 (41%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE+S+SS+G++  +D V  + +  SG + +  VE G  + +G  L   +       ++  
Sbjct: 44  IEVSISSAGKVAPKDTV-AVGAQVSGQLTELLVEAGDLVEEGQLLARIDATIAETNVEGS 102

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +  L+     +++ L+      D  +  FE+      DF          V    + +
Sbjct: 103 RAQLLELQASRTQQQATLELAKANADRAKMLFENDAVARADFEASQAEYAIAV--GRLEA 160

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +  + + +R++   
Sbjct: 161 INAQITRQSSSLRALQAT 178



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 85/213 (39%), Gaps = 19/213 (8%)

Query: 212 SQNDLNQQE--RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQ 268
           S+  L + +  R   ++TLEL +   ++  ML   N+    A+ E +     I+   LE 
Sbjct: 102 SRAQLLELQASRTQQQATLELAKANADRAKMLFE-NDAVARADFEASQAEYAIAVGRLEA 160

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL- 327
                  + S L  L+ T E   I +PI+GT+V  ++         +Q    I+  + L 
Sbjct: 161 INAQITRQSSSLRALQATLEFTNIYAPISGTVVSLEAV-EGQTLNANQTAPTILTLADLT 219

Query: 328 -TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              +   V+   +  VK G  A   F    D   ++++  + +I P     ++ +     
Sbjct: 220 IMTVETDVSEADVLRVKPGQAAW--FSTLGDS-SRRWETSVRQILPTPEVLNDVVL---- 272

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           Y+ +L I +         L+    A+V F   +
Sbjct: 273 YKALLDIENPENL-----LKPEMTAQVFFVTGS 300


>gi|114330978|ref|YP_747200.1| secretion protein HlyD family protein [Nitrosomonas eutropha C91]
 gi|114307992|gb|ABI59235.1| secretion protein HlyD family protein [Nitrosomonas eutropha C91]
          Length = 319

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 61/138 (44%), Gaps = 2/138 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P E  ++ +G I  +   + + +  SG++ +  VE G ++  GTPL   +D E    + 
Sbjct: 41  SPYESFIAGAGIIEAKSRNISVGTALSGLVTRVAVEVGDKVKVGTPLFYLDDREARAELA 100

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           ++   +   R  +   ++ L+   +  D++E   + R     + L ++++   ++    +
Sbjct: 101 IRNSDLARARAGLMEARAMLEDSKSLSDLIESLADQRAVSSEEMLRRHNTL--RISKARL 158

Query: 158 SSVYRSLKMKLTRMRSIY 175
           SS   +++     + S  
Sbjct: 159 SSAETAVRQAEALLASTQ 176



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 51/141 (36%), Gaps = 7/141 (4%)

Query: 203 KNLFEKNAVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           +    + A+  +DL +    +   ++ LE  +++ +    L     +  E  L   N L+
Sbjct: 93  REARAELAIRNSDLARARAGLMEARAMLEDSKSLSDLIESLADQRAVSSEEMLRRHNTLR 152

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QP 317
                L   +       + L   + T +   + +P++G I+         +AQ      P
Sbjct: 153 ISKARLSSAETAVRQAEALLASTQTTLDLLVVRAPVSGEILQVNIR-PGEFAQVGFLTTP 211

Query: 318 LMKIVPHSKLTYIRAKVTPKQ 338
           LM +  +    ++R  +    
Sbjct: 212 LMLLG-NLDQLHVRVDIDEND 231


>gi|319761122|ref|YP_004125059.1| secretion protein hlyd family protein [Alicycliphilus denitrificans
           BC]
 gi|330822980|ref|YP_004386283.1| secretion protein HlyD family protein [Alicycliphilus denitrificans
           K601]
 gi|317115683|gb|ADU98171.1| secretion protein HlyD family protein [Alicycliphilus denitrificans
           BC]
 gi|329308352|gb|AEB82767.1| secretion protein HlyD family protein [Alicycliphilus denitrificans
           K601]
          Length = 399

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 80/267 (29%), Gaps = 23/267 (8%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           R  +       ++       E   +  +A ++  Q DL   + L    AVS+ +L   + 
Sbjct: 106 RQARQLYANNATLAAQVRLREADVARAQADIARAQDDLRRRQMLTGDGAVSKEELQHAQS 165

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +  +  +L             +                 +     + +  +  +     
Sbjct: 166 QLDTARTQLAAAQAGVAAAREQLASNQALTQGVAVQEHPSVRAAAAKVREAYLADR---- 221

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                  +  + +P+ G +   +S           PLM IVP     ++ A     Q++H
Sbjct: 222 -------RTALPAPVDGYVAK-RSVQLGQRVAAGTPLMAIVPL-SQVWVDANFKENQLRH 272

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKI 393
           ++ G  A  +       ++ ++   +  +          + +Q       +    V ++I
Sbjct: 273 LRLGQPA--KLTADLYGKKVEYTGTVAGLGVGTGAAFALLPAQNATGNWIKVVQRVPVRI 330

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
              A       LR G   EV    K  
Sbjct: 331 ALDAAQLAEHPLRVGLSMEVTVDTKER 357



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/196 (10%), Positives = 56/196 (28%), Gaps = 17/196 (8%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSS----SGEILNEDNVVEIKSPFSGII 67
                 +R  LL++ G++ L   +     +  V+S    +     + NV++I     G +
Sbjct: 7   PAAKPARRQALLTLAGVVVLAG-AAWGLYDWLVASHYENTDNAYVQGNVIQITPQTGGTV 65

Query: 68  KKFQVENGSQILQGTPLLTFEDIETT------------DLIDLKKVSIKNLRCHIDTEKS 115
                +    +  G+ L+  +  +               +   +++   N          
Sbjct: 66  TAILADETDLVRAGSALVRLDPADARVALQQAEAALAQAVRQARQLYANNATLAAQVRLR 125

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
             D    + D+     + R  Q+L   G       +     + +    L      + +  
Sbjct: 126 EADVARAQADIARAQDDLRRRQMLTGDGAVSKEELQHAQSQLDTARTQLAAAQAGVAAAR 185

Query: 176 LNRLDLENKSSLLRAL 191
                 +  +  +   
Sbjct: 186 EQLASNQALTQGVAVQ 201


>gi|307609642|emb|CBW99147.1| hypothetical protein LPW_09321 [Legionella pneumophila 130b]
          Length = 338

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 72/221 (32%), Gaps = 18/221 (8%)

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                L + NA   +++ + + +       L+ N+ E K     + ++  E N +     
Sbjct: 61  QNTARLIKLNADEGSEVVKGQILANLEDEHLQHNLKELKEHE-KLAKIRYERNAQLVKKG 119

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                + ++    +    + +  +E       +++P  G I+  +          +QP+ 
Sbjct: 120 VISKDEYDRTLSEWQAASAAVRRIEAQISYLQLIAPADGRIIK-RDGEVGQLIPANQPVF 178

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +        + A+V  + I  V+ G    +R   + +     F   ++ I P       
Sbjct: 179 WLS-CCAPLRVSAEVDEEDIVLVRVGQKVLIRSDAFPNQI---FYGRVKSITPKGDPIAR 234

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +      Y V +  ++      N  L  G  AE        
Sbjct: 235 S------YRVRISFSE------NNPLLIGMTAETNIIVHEK 263


>gi|292492294|ref|YP_003527733.1| efflux transporter RND family, MFP subunit [Nitrosococcus
           halophilus Nc4]
 gi|291580889|gb|ADE15346.1| efflux transporter, RND family, MFP subunit [Nitrosococcus
           halophilus Nc4]
          Length = 427

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 79/230 (34%), Gaps = 32/230 (13%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN--LEFANYLKEISRDL 266
             +++ D ++ E  V ++   L     +++     + E         + A        +L
Sbjct: 109 QVLARLDTDRLEAEVIQARASLDSAKAKEQEAKATVLETRLRFERCQKLAQRQLCSQEEL 168

Query: 267 EQNQR--------------TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           +  +                 A   + L   E    +  I SPI+G ++  ++       
Sbjct: 169 DTTRAAYARAQAAEASAKAQVAVARATLDTHETDLAKAVIRSPISGIVL-VRAVEPGQTV 227

Query: 313 QQS--QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
             S   P++  +        +   V    +  VK+G  AT     Y       F A I +
Sbjct: 228 AASFQTPVLFTLAEDLTQMELHVDVDEADVGQVKEGQRATFTVDAYPGRI---FSAQITQ 284

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +    +Q+ + + T   YE +L++     +++++ LR G  A      + 
Sbjct: 285 V-RYGAQEIDGVIT---YETVLRV-----NNSDLSLRPGMTATADIVVEQ 325



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 44/100 (44%), Gaps = 1/100 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + ++V+++G +   + V ++ S  SG I+  +V+   QI +G  L   +      
Sbjct: 63  AQWGNLTVTVTATGTLEPVNQV-DVGSELSGTIETVEVDYNHQIERGQVLARLDTDRLEA 121

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
            +   + S+ + +      K+ +     +++  +K  + +
Sbjct: 122 EVIQARASLDSAKAKEQEAKATVLETRLRFERCQKLAQRQ 161


>gi|237748532|ref|ZP_04579012.1| multidrug resistance transmembrane protein [Oxalobacter formigenes
           OXCC13]
 gi|229379894|gb|EEO29985.1| multidrug resistance transmembrane protein [Oxalobacter formigenes
           OXCC13]
          Length = 322

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 21/226 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHE---------QKNMLRHINELYDEANLEFANYLKEI 262
           ++  LNQ E    K+  EL     +         ++N L  I  +  +   +  N     
Sbjct: 97  AKLALNQAEADCAKARAELASAQSDYKRAAVDLKRRNALIAIGAVSGDELTKTENAHTSS 156

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              +E  +   A   +++   +    +  I +P+ GT+   ++            L+ +V
Sbjct: 157 VAAIESAKAAIAQATARIDQAKVDLSRTVIRAPVDGTVAK-RTVQVGQKIPADAQLLVVV 215

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR--EKKFKAIIEKIDPIISQQDNN 380
           P     ++ A     Q++ V+ G  A +    Y          +          +     
Sbjct: 216 PVQD-MHVDANFKEGQLEKVRTGQKAELYSDLYGKSVIYHGTVEGFSGGTGSAFALIPAQ 274

Query: 381 LQTQEYYEV------ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             T  + +V       +K+       N +++  G    V    +  
Sbjct: 275 NATGNWIKVVQRLPTRIKLDPEELKANPLQV--GLSMTVTIDTREK 318



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 44/106 (41%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K + P + +   L  I+ + G++  +       +  S+        V ++ S  SGII++
Sbjct: 15  KPDSPRARRLKILAGIVVLCGIVYGAYWYFYASNFVSTDNAYTATEVAQVTSAVSGIIRE 74

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
             V +   + +G  L+  +D +    ++  +      R  + + +S
Sbjct: 75  VNVVDTQSVKKGDILVIIDDTDAKLALNQAEADCAKARAELASAQS 120


>gi|26246768|ref|NP_752808.1| hypothetical protein c0878 [Escherichia coli CFT073]
 gi|31563262|sp|Q8FJN6|YBHG_ECOL6 RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|26107167|gb|AAN79351.1|AE016757_255 Hypothetical membrane protein ybhG [Escherichia coli CFT073]
          Length = 332

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 127 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 185

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 186 ASLEQAQAQLAQAELNLQDSTLVAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 243

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +      K +   I  + P       + +  +L+T  
Sbjct: 244 RAYVDERNLDQAQPGRKVLL---YTDGRPNKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 300

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 301 VYRLRIVVTDADDA-----LRQGMPVTV 323



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 52  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 105 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 160 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 203

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 204 DSTLVAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 263

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 264 YTDGRPNKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 320

Query: 348 ATVRF 352
            TV+F
Sbjct: 321 VTVQF 325


>gi|116623196|ref|YP_825352.1| membrane-fusion protein-like protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116226358|gb|ABJ85067.1| Membrane-fusion protein-like protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 435

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/247 (11%), Positives = 72/247 (29%), Gaps = 30/247 (12%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER-----IVYKSTLELRENIHEQ 237
            + +L++   +  Q   T+ + L +    ++ D              +     +E +   
Sbjct: 122 AQQTLMQKEAALRQAQATLDQALAQSKITAEQDKTDLADAGFTVERARLEASKQEIVSRL 181

Query: 238 KNMLRHINELYDEANLEFANYLKEI-----SRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +     I+    +   +      ++        +    R      + + I ++   Q  +
Sbjct: 182 QGEESKIDYGVAQQKQKVQEATVDLHAASDRSRIASLTRQRDQAKADVDITKERIAQMEL 241

Query: 293 LSPIAGTI----------VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            SP++G +          +  + F   +       L ++ P      + AKV       +
Sbjct: 242 KSPLSGFLIFQSNYSQGWMNAKPFKVGDNVYAGMVLAEM-PDLTTMLMDAKVEEIDRGRI 300

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
                  VR     ++      A I +I  ++++  N       +     I         
Sbjct: 301 SPDQEVRVRIDSLPELT---LNAKIRQIS-LLAEASNEFPPVRSFRAYAAIPKPDP---- 352

Query: 403 IELRNGF 409
             LR G 
Sbjct: 353 -RLRPGM 358


>gi|304321057|ref|YP_003854700.1| hypothetical protein PB2503_07504 [Parvularcula bermudensis
           HTCC2503]
 gi|303299959|gb|ADM09558.1| hypothetical protein PB2503_07504 [Parvularcula bermudensis
           HTCC2503]
          Length = 807

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/335 (10%), Positives = 107/335 (31%), Gaps = 41/335 (12%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             ++       +R  I+ E + +     + D++E    +   Q+ ++  + +    +V  
Sbjct: 497 NFEVLPQERAQVRARIEGEITEI--YVQEGDIVEAG--APLAQVTNWQAERN---IRVIE 549

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             ++     L   L       +       +     + L   + +L   + L      S  
Sbjct: 550 AELAQSRAVLDRLLEGSTDEEVELA--RRQVERAASQLDFRRAELERQQALSADGYTS-- 605

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                 R V  +  E R  + +      +++ +  +A             ++   +    
Sbjct: 606 -----NRAVELARSEYRSALSDLGVARANLDVVDRDA----------TPSEIAAARADVT 650

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVY-NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                L+  +    + T+ + I G +V   ++    +Y +     ++I  + +   ++  
Sbjct: 651 RLEQDLSYRQDEVSRTTLRATIGGQVVTPEETLRLGDYLRVGDLFVEI-ENMQRPKVQVF 709

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V+  + + ++ G    +R   ++D         +  I P +  Q    + ++   ++  I
Sbjct: 710 VSQNEARFLEVGQRVRIRTWGFSDDVT---YGTVNSIAPTVDPQ----RGEQVLRIVASI 762

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ-EII 427
            +        +L +              L +  ++
Sbjct: 763 DEEVP-----DLPSNMTGYAKIETDTMPLWRAYLL 792



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 107/326 (32%), Gaps = 46/326 (14%)

Query: 12  NHPASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSG---EILNEDNVVEIKSPFSGII 67
              A   +  L++++ I    + W             G   E+L ++    +++   G I
Sbjct: 465 PTRAGWAKPVLIALLVIAFLFLWWPYQYK-------PGGNFEVLPQERAQ-VRARIEGEI 516

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V+ G  +  G PL    + +    I + +  +   R  +D     L+   ++   L
Sbjct: 517 TEIYVQEGDIVEAGAPLAQVTNWQAERNIRVIEAELAQSRAVLDRL---LEGSTDEEVEL 573

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +    R    LDF          +   G +S            R++ L R +  +  S 
Sbjct: 574 ARRQVERAASQLDFRRAELERQQALSADGYTS-----------NRAVELARSEYRSALSD 622

Query: 188 L---RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           L   RA L    +D T  +    +  V++ + +   R    S   LR  I  Q       
Sbjct: 623 LGVARANLDVVDRDATPSEIAAARADVTRLEQDLSYRQDEVSRTTLRATIGGQVVTPEET 682

Query: 245 NELYDEAN-----LEFANYLK-EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             L D        +E  N  + ++   + QN+  F +   ++ I                
Sbjct: 683 LRLGDYLRVGDLFVEIENMQRPKVQVFVSQNEARFLEVGQRVRIRTWGFSDD-------- 734

Query: 299 TIVYNQSFSSSNYAQQ--SQPLMKIV 322
            + Y    S +        + +++IV
Sbjct: 735 -VTYGTVNSIAPTVDPQRGEQVLRIV 759


>gi|296285121|ref|ZP_06863119.1| heavy metal RND efflux membrane fusion protein, CzcB family protein
           [Citromicrobium bathyomarinum JL354]
          Length = 498

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 53/195 (27%), Gaps = 39/195 (20%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-------TILSPIAGTIVYN 303
           A  E+   L    ++L Q  R     +     L  +  +        T+ +PI G I   
Sbjct: 173 AQQEYLAVLNSGDQELAQAMRERMRLLGMPPGLISSVGRSGRPQSTITVTAPIGGAITSL 232

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                       Q L +I       ++ A V   Q  +V+ G   +     + + R   F
Sbjct: 233 GVR-PGMTVMAGQTLAEIT-GFSPIWLEAAVPETQAANVRVGQPVSATLTAFPEER---F 287

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF-------------- 409
              I  I P        +                  + +  L+ G               
Sbjct: 288 SGPIVAILPSAEDASRTITV-----------RAQLPNASGRLKPGMFAQVSLTPDTRRAL 336

Query: 410 --PAEVLFTAKNTTL 422
             P+E +      T+
Sbjct: 337 LVPSEAVIRTGRRTI 351


>gi|295096518|emb|CBK85608.1| Multidrug resistance efflux pump [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 331

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 80/215 (37%), Gaps = 17/215 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  + + Y     ++D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLSQYRTGNRAQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E      T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 185 ASLEQAQAQLAQAELDLHDTTLIAPSDGTLMT-RAVEPGSMLSAGSTVLTLS-LTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA +    +  ++ G        +     +K +   +  + P       + +  +L+T  
Sbjct: 243 RAYIDEPNLGQMQPGRE---LLLYTDGRPDKPYHGKVGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            Y + + +TD   +     LR G P  V       
Sbjct: 300 VYRLRIIVTDADDA-----LRQGMPVTVTLNDGER 329



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 15/132 (11%), Positives = 38/132 (28%), Gaps = 4/132 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G  I  G  L   +     + +   K  +   +   D   +      ++
Sbjct: 51  GGRLASLNVDEGDAIKAGQTLGMLDKAPFENALMQAKAGVSVAQAQYDLMLAGY---RDE 107

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                 A   + +   D+   +++    ++     S    L+   +            ++
Sbjct: 108 EISQAAAAVKQAKAAYDYAQNFYNRQQGLWKSRTIS-ANDLENARSSRDQAQATLKSAQD 166

Query: 184 KSSLLRALLSSH 195
           K S  R    + 
Sbjct: 167 KLSQYRTGNRAQ 178


>gi|119387854|ref|YP_918888.1| RND family efflux transporter MFP subunit [Paracoccus denitrificans
           PD1222]
 gi|119378429|gb|ABL73192.1| efflux transporter, RND family, MFP subunit [Paracoccus
           denitrificans PD1222]
          Length = 445

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 89/261 (34%), Gaps = 23/261 (8%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             +  +L R+     +R++     + + A + + Q +              Q +L +   
Sbjct: 134 AQVSGQLRRLHVAAGDRVEAGQLLAEIDAEVQAAQVEGL------------QAELARLAA 181

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ-RTFADEMSKL 280
              +   +L     +                LE A   +++ R   +    T     + L
Sbjct: 182 ERSELQAQLAFAERQAGRHSSLAGRASSRVTLEEAERDRDVLRARIEALDATIRRSRAAL 241

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHSKLTYIRAKVTPKQ 338
              E T  +  I SP+AGT+V  ++         +   P++  +       +R+ V+   
Sbjct: 242 RAEEATLARSRITSPMAGTVVAVEAR-EGQTLNANYDTPVILRIADLATMTVRSDVSEAD 300

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           + H++ G         + D R +     +    P+  ++  +        V+  +     
Sbjct: 301 VVHLRPGMPVWFTTLGFPDRRHRATLRQVLPAPPVKEEEGASS-------VVTYVALFDI 353

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
           ++   EL +G  A+V F  ++
Sbjct: 354 ANAGGELLSGMTAQVFFVTES 374



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 48/140 (34%), Gaps = 4/140 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V++SG I      V++ +  SG +++  V  G ++  G  L   +       ++  
Sbjct: 114 LENAVTASGRIEP-GAYVDVGAQVSGQLRRLHVAAGDRVEAGQLLAEIDAEVQAAQVEGL 172

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +  L       ++ L F   +             ++     +       V    I +
Sbjct: 173 QAELARLAAERSELQAQLAFAERQAGRHSSLAGRASSRVTLEEAERD---RDVLRARIEA 229

Query: 160 VYRSLKMKLTRMRSIYLNRL 179
           +  +++     +R+      
Sbjct: 230 LDATIRRSRAALRAEEATLA 249


>gi|328470061|gb|EGF40972.1| HlyD family secretion protein [Vibrio parahaemolyticus 10329]
          Length = 391

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 98/290 (33%), Gaps = 36/290 (12%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM--KNLFEKNAVSQN 214
           ISS    +  K    +++  N +   +K   + A +S   + L +     + + + ++Q 
Sbjct: 30  ISSYATEVVRKGNIEKAVLANGMLQASKLVNVGAQVSGQIQRLAVNLGDEIKQGDLIAQI 89

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE--FANYLKEISRDLEQNQRT 272
           D   Q+  + ++   L     + +     I +   E   +            D E  + T
Sbjct: 90  DSLTQQNSLKEAQASLNSLNAQYQAKQAQIKQANYEYVRQKGMLAAKASSRADYENAEAT 149

Query: 273 FADEMSKLTILEKTRE--------------QKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            A   ++L  L+   E                TI +P+ GT+VY            +Q  
Sbjct: 150 LAIYKAELAQLDAEIEKAKINVDNAQLDLGYTTINAPMDGTVVYTAV-EEGQTVNANQTT 208

Query: 319 MKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP---- 372
             I+  +      ++A+++   +  V  G TA   F       + +FK  +  I+P    
Sbjct: 209 PTIIELAKLDTMTVKAEISEADVIFVHPGQTA--LFTILGKPNQ-QFKGTLRAIEPGPTI 265

Query: 373 ---IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                S    +     YY  +  +      +    LR G  A+V    + 
Sbjct: 266 MDGDDSDLSISDSDAIYYNAVFDV-----KNPQGILRIGMTAQVSIVLEQ 310



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 53/130 (40%), Gaps = 3/130 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE +V ++G +     +V + +  SG I++  V  G +I QG  +   + +   + + 
Sbjct: 41  GNIEKAVLANGMLQAS-KLVNVGAQVSGQIQRLAVNLGDEIKQGDLIAQIDSLTQQNSLK 99

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S+ +L      +++ +   N +Y   +    ++     D+     +    ++   +
Sbjct: 100 EAQASLNSLNAQYQAKQAQIKQANYEYVRQKGMLAAKASSRADYENAEATLA--IYKAEL 157

Query: 158 SSVYRSLKMK 167
           + +   ++  
Sbjct: 158 AQLDAEIEKA 167


>gi|291165890|gb|EFE27937.1| efflux transporter, RND family, MFP subunit [Filifactor alocis ATCC
           35896]
          Length = 419

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 115/332 (34%), Gaps = 30/332 (9%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    + +   +         E  +  D I+     +   +  +  E + +     K + 
Sbjct: 20  ISVIHLTDKLTVNTEQV----EKTDFQDTIEENGSVVSADKVTLSAELNGVVLSVVKENT 75

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                + +    +D     H       N       + + M       I   +L++E+   
Sbjct: 76  --PVTQGQAILTIDSSQIEHQIAQLRGNLQSIQGQKEMSMPSVYQSQIEAQKLEIESTKV 133

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            ++ L    +K++   K L+E  ++S+++L+  E    +  ++            + +N 
Sbjct: 134 AMQDL----EKNIQDAKLLYEAGSISKSELDNLELSYKQLQIKKNAQ-------EKQLNL 182

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +Y+++  +         +               + +LE  +++  + SPI G +      
Sbjct: 183 IYEQSKPKAGTDKMYDGQQ--------KSVSENMKLLENQKQKAVLRSPINGVVSEILVK 234

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S    AQ   P++ I+ +     I + V    + ++  G    +R     +  +     +
Sbjct: 235 S-GELAQLQSPVVTII-NKDRLQIESYVLTDDVIYLHVGDKVNIRQET--NSEDLSGTGV 290

Query: 367 IEKIDPIISQQDNNLQ-TQEYYEVILKITDLA 397
           I +I    ++Q + L   ++  +V + I D  
Sbjct: 291 ISEISAYATEQRSGLGLDEKKVKVTVSIQDKG 322



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 78/215 (36%), Gaps = 11/215 (5%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   + V + +  +G++    V+  + + QG  +LT +  +    I   + ++++++   
Sbjct: 51  VVSADKVTLSAELNGVVLSV-VKENTPVTQGQAILTIDSSQIEHQIAQLRGNLQSIQGQK 109

Query: 111 DTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS-TCSKVFNYGISSVYRSL 164
           +       +S ++    + +  + A +  E+ + D    Y + + SK     +   Y+ L
Sbjct: 110 EMSMPSVYQSQIEAQKLEIESTKVAMQDLEKNIQDAKLLYEAGSISKSELDNLELSYKQL 169

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           ++K            +     +    +    QK ++    L E     Q         + 
Sbjct: 170 QIKKNAQEKQLNLIYEQSKPKAGTDKMYDGQQKSVSENMKLLEN----QKQKAVLRSPIN 225

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
               E+     E   +   +  + ++  L+  +Y+
Sbjct: 226 GVVSEILVKSGELAQLQSPVVTIINKDRLQIESYV 260


>gi|325981359|ref|YP_004293761.1| efflux transporter, RND family, MFP subunit [Nitrosomonas sp.
           AL212]
 gi|325530878|gb|ADZ25599.1| efflux transporter, RND family, MFP subunit [Nitrosomonas sp.
           AL212]
          Length = 499

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 69/205 (33%), Gaps = 19/205 (9%)

Query: 217 NQQERIVYKSTLELRENIHEQKNML--RHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + +  V K  L L +  +E++  L    I+   +    E      +I+ +L   +    
Sbjct: 235 LRSQYSVAKKRLVLAKTTYEREKQLWEEKISAKQEFLLAEELWNEAQIALELATTKLRAL 294

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
               +   L+    Q  I +PI+G I+     +     ++ + +   V      +    V
Sbjct: 295 GVQPESGFLKTNITQYEIRAPISGIIIAKAV-ALGEVLKEDREI-YTVADVSTVWTAVTV 352

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
            PK +  ++ G   +V+   Y      + +  +  I  +I  Q             +++ 
Sbjct: 353 YPKDLNVIRVGQKVSVKATAYD----IESEGTVTYISTLIGGQTRTAT------ARVELD 402

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
                + + + R G        A+ 
Sbjct: 403 -----NTDGKWRPGMFINAELVAEE 422


>gi|330827720|ref|YP_004390672.1| hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter,MFP
           subunit [Aeromonas veronii B565]
 gi|328802856|gb|AEB48055.1| RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family, MFP
           subunit [Aeromonas veronii B565]
          Length = 377

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 20/154 (12%)

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L++ +  +    + +  L+ T  ++ + +P +G +V  ++     Y Q       IV 
Sbjct: 138 EQLDEAEAAYRSLEADIESLKATIARREVRAPFSG-VVGLRNVFLGQYLQPGT---DIVR 193

Query: 324 HSKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
               + +R +  V    I  +K G T  +    Y   +   F   I  I+P ++ Q   +
Sbjct: 194 LEDTSVMRLRFTVPQTDISKIKLGQTIKINVDAYPQTQ---FDGHITAIEPAVNFQSGLI 250

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           Q Q               +N+ +LR+G  A    
Sbjct: 251 QVQ-----------ADIPNNDGQLRSGMFARASI 273



 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 49/139 (35%), Gaps = 1/139 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I     E+G  +     LL+ +       +   +  +   +   D  ++     +   
Sbjct: 78  GTIDAITFESGKPVKADQLLLSLDSTVERANLRASQAKLPAAKAKFDRFQNLYKTSSISK 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           + L++A  +      D      +   +      S V     + L +      + + LE+ 
Sbjct: 138 EQLDEAEAAYRSLEADIESLKATIARREVRAPFSGVVGLRNVFLGQYLQPGTDIVRLED- 196

Query: 185 SSLLRALLSSHQKDLTMMK 203
           +S++R   +  Q D++ +K
Sbjct: 197 TSVMRLRFTVPQTDISKIK 215


>gi|296115491|ref|ZP_06834124.1| secretion protein HlyD family protein [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295977974|gb|EFG84719.1| secretion protein HlyD family protein [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 386

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 76/258 (29%), Gaps = 22/258 (8%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL------NQQERIVYKSTLELR 231
           R+ LE   + L   +   ++    +       AV Q +L       +  R+V        
Sbjct: 94  RIRLEAAEAGLGQAIRHVRRLFAALDEARALVAVRQTELDRASADLRARRMVVGQGAVTA 153

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E      +           A   +   L +                ++L       E+ T
Sbjct: 154 EEARHASDATNTAKAALQVAQAAYTVALSQTQGTTLPTHPDVIAAKARLRAATLDMERTT 213

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P+ G +   +             +M +VP     +I A    +Q++H+  G  AT+ 
Sbjct: 214 VRTPVGGMVAK-RDVQLGRRVAVGDRMMAVVPFD-QFWIDANFKERQLRHICAGQPATMT 271

Query: 352 FPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDN 401
              Y       +   +  ++          P  +   N ++  +   V +    +  +  
Sbjct: 272 ADVYGSSV--IYHGHVMDVNAGSGAAFALLPAQNATGNWIKVVQRVPVRIAFDPVELARK 329

Query: 402 NIELRNGFPAEVLFTAKN 419
            + +  G   EV      
Sbjct: 330 PLRI--GMSTEVEIDTGR 345



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 55/189 (29%), Gaps = 1/189 (0%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIE-ISVSSSGEILNEDNVVEI 59
           M                KR+  L     I  + W     +   ++ S+ +     +VV I
Sbjct: 1   MADTPVPAAADPAATRRKRLLWLGGGLAIIAVGWGAYTFLSNGALVSTDDAYVNGHVVAI 60

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
               +G ++    ++  ++L G  L+  +  +    ++  +  +     H+    +ALD 
Sbjct: 61  TPQVAGTVRAIGADDTDRVLTGASLVELDTSDMRIRLEAAEAGLGQAIRHVRRLFAALDE 120

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                 V +   +     L                   +S   +      ++        
Sbjct: 121 ARALVAVRQTELDRASADLRARRMVVGQGAVTAEEARHASDATNTAKAALQVAQAAYTVA 180

Query: 180 DLENKSSLL 188
             + + + L
Sbjct: 181 LSQTQGTTL 189


>gi|293374192|ref|ZP_06620522.1| hypothetical protein CUW_2028 [Turicibacter sanguinis PC909]
 gi|292647172|gb|EFF65152.1| hypothetical protein CUW_2028 [Turicibacter sanguinis PC909]
          Length = 430

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 73/376 (19%), Positives = 124/376 (32%), Gaps = 61/376 (16%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V  SG ++        K    G      V +G  +  G  L+T+ + E T  I+     I
Sbjct: 51  VILSGSVIPSQYTTFTKDVTKGEEMTINVSHGDSVQVGDVLITYHNAEITSQINDLNEQI 110

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             L              N K   L        + +   +       SK+     S V + 
Sbjct: 111 ATL--------------NAKKAKLSSEGTPAAKSVNKQIKSIEDQKSKLQQETKSQVNQI 156

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           LK     ++       D EN ++L+  L +             E   V +N+L   E  +
Sbjct: 157 LKKLDELVKQKNELNPDDENDAALVADLDAQI-----------ESCYVQKNEL---EYNL 202

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                E    I + ++              + ++  +E    L++   T   E +KL   
Sbjct: 203 PGQVAEFDTQISDLRS--------------QLSDEDQETFNSLDEQINTLVKEKTKLEEK 248

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E  +E    ++P +G I   +  SS N       ++K+   S   Y+ A V  K    + 
Sbjct: 249 EYIKE----VAPFSGVISLVEDSSSENPV-----ILKL--KSPDFYVTASVGEKDYAKIS 297

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G  A             K   I E  DP+ +   +   T   Y V + + D +      
Sbjct: 298 VGMEAETLLIATNKTVSGKITFIDE--DPLQATNTSGTSTSSTYLVKVSLDDQS------ 349

Query: 404 ELRNGFPAEVLFTAKN 419
           EL NG+ A+V     +
Sbjct: 350 ELVNGYQAQVSIKLAD 365


>gi|224368739|ref|YP_002602900.1| RND efflux transporter (HlyD family secretion protein)
           [Desulfobacterium autotrophicum HRM2]
 gi|223691455|gb|ACN14738.1| RND efflux transporter (HlyD family secretion protein)
           [Desulfobacterium autotrophicum HRM2]
          Length = 439

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 76/217 (35%), Gaps = 20/217 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++  + Q +  V+++  +L+      +   + +  L D    E    LK    D    + 
Sbjct: 139 ARARVVQAQATVFEALSKLKRLQMLHELSHQKLPALNDLDVAEAI--LKRAQADEVSAKA 196

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHS-KLT 328
             ++  ++L   +    +  I SPI G ++  +          S   P++ I+       
Sbjct: 197 MVSEAQAELDARDTDLSKAEIRSPINGLVLK-RGIEPGQTVAASLQAPVLFILAADLHQM 255

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +   V    +  VK+G  A      + D +       +       +Q  N + T   YE
Sbjct: 256 ELHVDVDEADVGQVKEGQQAIFTVDAFPDRKFPAAITQV----RYAAQTVNGVVT---YE 308

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAK--NTTLA 423
            +LK+      + ++ LR G  A      +    TL 
Sbjct: 309 TVLKVD-----NRDLLLRPGMTATAEIIVEQFKHTLL 340



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 72/197 (36%), Gaps = 24/197 (12%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW---------------SILLPIEISVSSSGEIL 51
           K  K+     +    L  +  I+  I W               + +  + +++ ++G I 
Sbjct: 25  KGAKKGFKVFVIITALFMVALILVAIIWKNAGKSSKIVYETQPARMGDMTVTIEATGTIA 84

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
             +  V++ S  SGIIK   V+   Q+  G  L   +  +    +   + ++++ R  + 
Sbjct: 85  PTNQQVDVGSELSGIIKSVAVDYNDQVTTGQVLARLDTEKLNAQVIQSRANLESARARV- 143

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                   +  +  V E   + +  Q+L  L           +   + + R+   +++  
Sbjct: 144 --------VQAQATVFEALSKLKRLQMLHELSHQKLPALNDLDVAEAILKRAQADEVSAK 195

Query: 172 RSIYLNRLDLENKSSLL 188
             +   + +L+ + + L
Sbjct: 196 AMVSEAQAELDARDTDL 212


>gi|23500212|ref|NP_699652.1| HlyD family secretion protein [Brucella suis 1330]
 gi|23463815|gb|AAN33657.1| HlyD family secretion protein [Brucella suis 1330]
          Length = 314

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 48/396 (12%), Positives = 114/396 (28%), Gaps = 85/396 (21%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M+LL +I  +  +  +            GE +    +   +      ++   V+ G ++ 
Sbjct: 1   MSLLCVIPFVSSLFAACGTQSLAVGHVEGEFVQLAPLQVAQ------VRDIAVKRGDRVE 54

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P+ T ED +                  I   ++       +  +       R E++ 
Sbjct: 55  AGEPIATVEDTD----------------ARIAVAQAEAALAQAQAQLANLQVGKRPEEIA 98

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                                    LE      RA     Q+ L
Sbjct: 99  V----------------------------------------LEAAVRSARAQADDAQRTL 118

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++L  +   +Q  L+     +  +   + ++       +  +    +E         
Sbjct: 119 LRTRDLARRGVATQAQLDDAATQLEVAEAAIGQSTANL--AVGKLPARPEEIKA------ 170

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                     +       ++L   +  R Q+TI +P AG I      +  + A  S P++
Sbjct: 171 ---------AENAVKSAKAQLQTAKWQRAQRTIEAPAAGRITDV-VRNPGDIAGPSAPVL 220

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++P      ++  +  ++   V  G         + D      +A +  + P       
Sbjct: 221 TMLP-DGAVKLKVYIPEERFSDVAVGSV----LSVHCDGCAPGLQARVSYVSPDPEFTPP 275

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + + E  + ++ + +    +    L+ G   +V  
Sbjct: 276 VIYSLETRQKLVYLVEAHPVNPASPLQPGQIVDVDL 311


>gi|32472081|ref|NP_865075.1| hypothetical protein RB2651 [Rhodopirellula baltica SH 1]
 gi|32397453|emb|CAD72759.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 795

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/163 (12%), Positives = 60/163 (36%), Gaps = 9/163 (5%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS-GI 66
            + R +    + +   +++ ++     +  +P+   V S+  IL E          S GI
Sbjct: 432 PMNRRNIRPRRAIAWCTLLAMVVF---AGTVPLPRHVYSTVRILPEQETRV--HLTSPGI 486

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA---LDFLNNK 123
           + +  V+ G  + +G  L    + E    +   +  ++     ++  +++   +   +++
Sbjct: 487 LSQIHVDPGQTVRRGDVLAELSNPEIELEVLEAEGDVRQQTMRLEGLRASQTLVPEASSQ 546

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
               E   +   ++L   + +  S        G+  + +S   
Sbjct: 547 LPAAEALLDEMRDRLAAAIRRRDSLTITAPCDGVVIIAQSNPQ 589



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V + D+   E    +  LE+ E   + +     +  L     L     + E S  L   +
Sbjct: 498 VRRGDVLA-ELSNPEIELEVLEAEGDVRQQTMRLEGLRASQTL-----VPEASSQLPAAE 551

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
               +   +L    + R+  TI +P  G ++  QS 
Sbjct: 552 ALLDEMRDRLAAAIRRRDSLTITAPCDGVVIIAQSN 587


>gi|308050577|ref|YP_003914143.1| secretion protein HlyD family protein [Ferrimonas balearica DSM
           9799]
 gi|307632767|gb|ADN77069.1| secretion protein HlyD family protein [Ferrimonas balearica DSM
           9799]
          Length = 384

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 100/320 (31%), Gaps = 41/320 (12%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  L ++             Q+++          + +   +      L +    + +
Sbjct: 70  RAYVLPLASQVAGRIDEIRVVNNQVVEQGEVVLRIEQERYQLAVRKAEADLALAGQEVGA 129

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
              N    + +       L++ + D+  +  + E+  VSQ D+++               
Sbjct: 130 GTANVASAQARLIEAVTNLNNIKADVARVLAVAEEGYVSQTDVDR--------------- 174

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +  L +     D+A  +     ++   D ++        ++ L       E   + 
Sbjct: 175 ---ARASLSNAQAGVDKAQADLEVAKQQAGID-DERNPKVQRALTALGQARLDLENTEVR 230

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +   + +    YA   QPL+  +  ++  ++ A +    ++H+  G    +   
Sbjct: 231 APRLGLVSNLR-YDVGYYANPGQPLVTFI-STRDVWVEAYLRENNLEHIAPGDPVEMVLD 288

Query: 354 HYADIREKKFKAIIEKID--------------PIISQQDNNLQTQEYYEVILKITDLAFS 399
                  +  K  +  +               P        L+  E + V+++ TD    
Sbjct: 289 A---APGRVMKGEVVSVSYGVQFETGSAVGSLPDPVTTTGWLRDPERFPVLIRFTDEDSK 345

Query: 400 DNNIELRNGFPAEVLFTAKN 419
               E   G  A+++     
Sbjct: 346 GFRRE---GGQADIIIYTDQ 362


>gi|289163757|ref|YP_003453895.1| coiled-coil protein [Legionella longbeachae NSW150]
 gi|288856930|emb|CBJ10744.1| putative coiled-coil protein [Legionella longbeachae NSW150]
          Length = 343

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 90/236 (38%), Gaps = 22/236 (9%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    +   K   +R  + +    K     S +    ++ +      ++ + R I L   
Sbjct: 68  IRAPENGYIKKLSARTGEKIIANQKLLQFASPLVEEKLAYL------QVEKKRIIELMNS 121

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFE--KNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            +EN S  +   L+  Q+D+   K ++E  KN     DL + +        E R+N    
Sbjct: 122 LVENNSQQISQALNISQQDIETSKLVYERFKNYSKNGDLIELQLE------EARKNYITA 175

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 +++  +E +L+ A  ++         +R   +  +++  ++       + SP  
Sbjct: 176 VRSYVELSQKIEELSLQRATLIE------VNFKRKILEIDNEVEQIKTKMRYFALRSPDN 229

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           GTI+   +     +    Q LM IV   K   I A + PK  + + +G    + FP
Sbjct: 230 GTIMNISTHQD-EFVSAGQNLMSIV-TDKNLRIVAFIEPKYAEDIYQGKKINIIFP 283


>gi|284036754|ref|YP_003386684.1| efflux transporter RND family, MFP subunit [Spirosoma linguale DSM
           74]
 gi|283816047|gb|ADB37885.1| efflux transporter, RND family, MFP subunit [Spirosoma linguale DSM
           74]
          Length = 365

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 91/294 (30%), Gaps = 45/294 (15%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  ++ +    R+ QLL          S   +    +   + +     + +      +LE
Sbjct: 59  QQRLISEGDSIRQNQLL------FVLESASEDARQQAAANAYRQARANLSANSPVLAELE 112

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +    R  +++   +    K L+ +NA S+ +L + E     S   LR  ++  +    
Sbjct: 113 AQVRNARTRVANDSINYNRFKELYGQNATSRAELERAELNYTISRNNLRAQLNTFQRSRD 172

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I                         +    +  S+    E       I S + G +  
Sbjct: 173 QI-------------------------RLDVENNRSQFVTSEVAGRNTRIRSFVNGKVYE 207

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                     +    L  +V      + +  V       ++ G    ++   Y D   K 
Sbjct: 208 V-YKDPGEVVRVGDQLA-LVGSGNQLFAQLAVDESDFGRIRTGQEVILKADVYPD---KV 262

Query: 363 FKAIIEKIDPIISQQDN---------NLQTQEYYEVILKITDLAFSDNNIELRN 407
           FKA +EKI P +++ D            +   YY + ++   +   + ++    
Sbjct: 263 FKARVEKIYPKLNRTDQSFRVDAEFIGERPASYYGLTVEANIIISQNKHVLTIP 316



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 7/155 (4%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +  +V +SG +    N   + +  +G++++  +  G  I Q   L   E          
Sbjct: 31  ELTEAVYASGNVYP-RNEYTVTADAAGMLQQRLISEGDSIRQNQLLFVLESASEDARQQA 89

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE------SREEQLLDFLGKYHSTCSKV 152
              + +  R ++      L  L  +               +R ++L        +   + 
Sbjct: 90  AANAYRQARANLSANSPVLAELEAQVRNARTRVANDSINYNRFKELYGQNATSRAELERA 149

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                 S         T  RS    RLD+EN  S 
Sbjct: 150 ELNYTISRNNLRAQLNTFQRSRDQIRLDVENNRSQ 184


>gi|91778777|ref|YP_553985.1| major facilitator superfamily efflux pump membrane fusion protein
           [Burkholderia xenovorans LB400]
 gi|91691437|gb|ABE34635.1| MFS efflux pump, membrane fusion protein, EmrA subfamily
           [Burkholderia xenovorans LB400]
          Length = 393

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/364 (11%), Positives = 101/364 (27%), Gaps = 72/364 (19%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K  K+     L  + ++ I+  I    W          +       + N + +    SG 
Sbjct: 46  KPRKKPGRKPLIILAVVVILLAIVAFVW-WFATRNEITTDDAY--TDGNAITMAPKVSGY 102

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V +   + +G  L+  +  +    +D  +  +   +  ++     LD    +Y  
Sbjct: 103 VVQLAVNDNVYVHKGDLLVVIDKRDYQAQVDQAEAQVGLAKAQLNAALVQLDIARIQYPA 162

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             +  +++            S+    F    ++  R   +         ++  D + +S+
Sbjct: 163 QYRQAKAQT-----------SSAEANFRQAEAAYLRQHAVDQRATSQQNIDTADAQRQSA 211

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                 +  Q+    +                                      +R    
Sbjct: 212 SASVEQARAQQQTASLVP----------------------------------QQIRQTEA 237

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             +E   +     ++    LEQ Q   +                 + SP  G I      
Sbjct: 238 TVEERRQQV----QQAEAQLEQAQLNLS--------------YCEVRSPSDGWITRRNV- 278

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
               + Q    L  IV  +   ++ A     Q++ ++ G    V    Y  +     +  
Sbjct: 279 QLGTFLQAGVSLFAIV--TPQVWVTANFKESQLERMRPGDKVKVEVDAYPKL---DLRGH 333

Query: 367 IEKI 370
           ++ +
Sbjct: 334 VDSV 337


>gi|41322916|ref|NP_958782.1| plectin isoform 1 [Homo sapiens]
 gi|209572726|sp|Q15149|PLEC_HUMAN RecName: Full=Plectin; Short=PCN; Short=PLTN; AltName:
            Full=Hemidesmosomal protein 1; Short=HD1; AltName:
            Full=Plectin-1
 gi|40849936|gb|AAR95680.1| plectin 6 [Homo sapiens]
          Length = 4684

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 59/199 (29%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1480 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1539

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++    +    +  +++ K+    A   S  +    ++       
Sbjct: 1540 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR------- 1592

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1593 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1651

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1652 VELASRVKAEAEAAREKQR 1670



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2320 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2375

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2376 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2435

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2436 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2495

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2496 EETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2539



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++        +  ++ LR   + E   +     + +  E++    EE++     +  +T 
Sbjct: 1546 VDAQQQKRSIQEELQQLRQSSEAE---IQAKARQAEAAERSRLRIEEEIRVVRLQLEATE 1602

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +            L+    R       +   + ++  LR  +    +     +      
Sbjct: 1603 RQ-----RGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASR 1657

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQ 268
              ++ +  ++++   ++  ELR    E +  LR    E   +  +      +    +L+ 
Sbjct: 1658 VKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQS 1717

Query: 269  NQRTFADEMSKLT 281
             + +FA++ ++L 
Sbjct: 1718 KRASFAEKTAQLE 1730



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2369 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2428

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2429 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2488

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2489 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2548

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2549 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2579



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1777 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1836

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1837 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1893

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1894 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1945

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1946 LAEEAKRQRQLAEED 1960



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 6/148 (4%)

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +     ++            ++  L + R +       + ++      L    ++  + +
Sbjct: 1482 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1541

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                       D  QQ+R + +   +LR++   +        E  + + L     ++ + 
Sbjct: 1542 EEAA------VDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR 1595

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
              LE  +R       +L  L    E+  
Sbjct: 1596 LQLEATERQRGGAEGELQALRARAEEAE 1623



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 54/183 (29%), Gaps = 8/183 (4%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + F++     +E+     E+Q  +   +     + +      +   +         +  L
Sbjct: 1471 IKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKEL 1530

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-------QERIVYKSTLE 229
             +   E       A + + Q+  ++ + L +    S+ ++          ER   +   E
Sbjct: 1531 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1590

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +R    + +   R       E         +E      Q Q        ++    + + Q
Sbjct: 1591 IRVVRLQLEATERQRGGAEGELQA-LRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQ 1649

Query: 290  KTI 292
              +
Sbjct: 1650 AEV 1652



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2457 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2516

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL R+  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2517 AEAERLKL-RVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2574

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2575 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2614



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1688 RLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1747

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1748 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1807

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1808 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1863

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1864 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1896



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1593 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1646

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1647 KRQAEVE--LASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1704

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1705 ETAQRSA--EAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1762

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1763 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1794



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 62/204 (30%), Gaps = 12/204 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E T L    ++++K      +  +   +    +   LE       EQ            +
Sbjct: 1981 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLE-------EQAAQHKADIEERLA 2033

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYL---NRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            ++     S + R   +    +R         L L+       A  +  + +L  +++  E
Sbjct: 2034 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAE 2093

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                S+     +     +   E      E +  ++      +EA  +    L+E+ R   
Sbjct: 2094 DTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKA 2153

Query: 268  --QNQRTFADEMSKLTILEKTREQ 289
              +  R   +   + +  +    Q
Sbjct: 2154 KVEEARRLRERAEQESARQLQLAQ 2177


>gi|328474218|gb|EGF45023.1| hypothetical protein VP10329_15965 [Vibrio parahaemolyticus 10329]
          Length = 371

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 71/209 (33%), Gaps = 18/209 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +++  L +Q +++        ++  ++   +  + E    A     +   +        +
Sbjct: 97  INKGQLVKQGQVIANIDKRDLDSQLKRAQAMLRVKEKEFNAAKSLKSRGLQGEVAFATAE 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               D  + L  ++   +   + +P  G IV +      ++     P+  ++   +   I
Sbjct: 157 AALVDARANLNNVQTALKNTEVKAPFDG-IVDHHFVEVGDFVGVGDPIATVI-DLETLVI 214

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A V+ + IQ++K+G  A VR      I  +     +  I  + S   N           
Sbjct: 215 EADVSERHIQYLKEGLQADVR-----TINGQHHLGTLRYIGRVSSVSTNTF--------- 260

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               ++   + N  +  G  AEV      
Sbjct: 261 --PIEIEIDNRNSLIPAGISAEVQLPLNE 287


>gi|313673851|ref|YP_004051962.1| efflux transporter, rnd family, mfp subunit [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940607|gb|ADR19799.1| efflux transporter, RND family, MFP subunit [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 421

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 109/377 (28%), Gaps = 90/377 (23%)

Query: 47  SGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           +G I  +      I +  +G I+  +V+ G  + +G  +   +D E    I   + SI+ 
Sbjct: 50  TGIIKAQVGAQISIGARATGTIRMLKVKVGDPVKKGQLVADIDDREIVAQIASLQDSIRT 109

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           +   I  E                                    ++++    SS+ + ++
Sbjct: 110 IENEIKQE------------------------------------NELYPVKKSSLQKDIE 133

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           +                      R+     +      K LF+K   +   L++ +  +  
Sbjct: 134 IN---------------------RSKYLFAKSSYEREKMLFDKGFSTTEQLDKAKTDMDV 172

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +   L+ +                E  LE  N  KE +  L+  +    +  + L   + 
Sbjct: 173 AYNNLKSS----------------EIALEKLN--KEHNLTLDSLKIKLDNAKNTLRETQV 214

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA--KVTPKQIQHVK 343
                 I SPI G +    +            +  ++       +     +    I  VK
Sbjct: 215 RLSYTKIYSPIDGIVTQVNAD-EGETIVAGLQVANLITVFNPNMLEMWIYIDETDIGKVK 273

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G         Y D +   F+ ++ KI      +     +  YY  I+ I+     D   
Sbjct: 274 IGDNVEYTVDTYGDRK---FEGVLSKIYY----EPVVKDSIVYYLGIVPIS---LEDAKF 323

Query: 404 ELRNGFPAEVLFTAKNT 420
            LR      V       
Sbjct: 324 -LRPEMTTHVKIKVSEK 339


>gi|148360503|ref|YP_001251710.1| membrane fusion protein [Legionella pneumophila str. Corby]
 gi|148282276|gb|ABQ56364.1| membrane fusion protein [Legionella pneumophila str. Corby]
          Length = 338

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 80/241 (33%), Gaps = 24/241 (9%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE-QKNMLRHIN 245
            ++A+ ++   + T+M  +  +N      LN  E         L     E  ++ L+ + 
Sbjct: 40  AVQAVYATGTVEPTVMMPIASQNTARLVKLNADEGSEVVKGQILASLEDEHLQHNLKELK 99

Query: 246 ELYDEANLEFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           E    A + +    + + +      + ++    +    + +  +E       +++P  G 
Sbjct: 100 EHETLAKIRYERNAQLVKKGVISKDEYDRTLSEWQAASAAVRRIEAQISYLQLIAPADGR 159

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I+  +          +QP+  +        + A+V  + I  V+ G    +R   + +  
Sbjct: 160 IIK-RDGEVGQLIPANQPVFWLS-CCAPLRVSAEVDEEDIVLVRVGQKVLIRSDAFPNQI 217

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              F   ++ I P       +      Y V +  ++      N  L  G  AE       
Sbjct: 218 ---FYGRVKSITPKGDPIARS------YRVRINFSE------NNPLLIGMTAETNIIVHE 262

Query: 420 T 420
            
Sbjct: 263 K 263


>gi|332141158|ref|YP_004426896.1| HlyD family secretion protein [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551180|gb|AEA97898.1| HlyD family secretion protein [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 349

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 80/226 (35%), Gaps = 34/226 (15%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +K A+     N +ER   +   EL+ NI E K     I      A+L  +N   E    
Sbjct: 89  VKKGALLVQLNNTEERARVE---ELKANIEEAKRQFTRI------ADLRQSNATSEQL-- 137

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L++ Q       ++L I +       I +P +G  + N+  S  +  Q    +  +    
Sbjct: 138 LDEQQARVKALEAQLDIAQAQLNDLQIRAPFSGL-LGNREISVGSLVQPGNTITSL---D 193

Query: 326 KLTYIRA--KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            ++ I+    V+   +  V KG T T     Y     + F   I  ID  +     +   
Sbjct: 194 DISVIKVDFSVSENHLASVAKGQTITASSVAYP---GESFSGKITNIDTRLDPISRS--- 247

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                + ++    A  + +  LR G    V+       +   ++ P
Sbjct: 248 -----IRVR---AALDNQDKRLRPGMLLTVVV---EKRVLNTLVLP 282



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 40/103 (38%), Gaps = 4/103 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K    E+G ++ +G  L+   + E    ++  K +I+  +     + + +  L      
Sbjct: 78  VKALHFEDGDEVKKGALLVQLNNTEERARVEELKANIEEAK----RQFTRIADLRQSNAT 133

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            E+  + ++ ++     +     +++ +  I + +  L     
Sbjct: 134 SEQLLDEQQARVKALEAQLDIAQAQLNDLQIRAPFSGLLGNRE 176


>gi|306845835|ref|ZP_07478403.1| secretion protein HlyD family protein [Brucella sp. BO1]
 gi|306273727|gb|EFM55565.1| secretion protein HlyD family protein [Brucella sp. BO1]
          Length = 349

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 86/279 (30%), Gaps = 21/279 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 77  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 136

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++        +    + +       +       D+A    +   +++   +   + 
Sbjct: 137 NTVRVDALLPRGVTT----QSSADTAHGNMLQAQAAVDQAEAALSVAKEDLRTIIVAREG 192

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + + +   +   IL+P  G +          Y      L+ +VP   + 
Sbjct: 193 LNADLHNAEAAVALAKIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVP--DVK 249

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 250 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 306

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++     ++I+      +   L  G    V     +
Sbjct: 307 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAS 345


>gi|266625023|ref|ZP_06117958.1| secretion protein HlyD [Clostridium hathewayi DSM 13479]
 gi|288863078|gb|EFC95376.1| secretion protein HlyD [Clostridium hathewayi DSM 13479]
          Length = 542

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 59/424 (13%), Positives = 125/424 (29%), Gaps = 64/424 (15%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   +SSSG +   ++   + S   G I     E G Q+ +G  L   +     + +   
Sbjct: 53  ISSRLSSSGVLKPRNSYQ-VSSLAEGEITSADFEVGDQVEKGQVLYRIDVSSMEEEMKAA 111

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE----EQLLDFLGKYHSTCSKVFNY 155
           + S +  R   + E++  D+   +    +  F S +    +++    G+  S+ +K+ + 
Sbjct: 112 QNSAE--RAARNLEEAQKDYSRAQGRFNDGIFRSGDSGYIKKIYIKAGETVSSGTKIADI 169

Query: 156 GISSVYR-SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              S+ R  +        +I      L   SS    +  +     +  + L     V   
Sbjct: 170 EDDSIMRLKVPFLSAEAAAIGTGSTALVTLSSTGEQIPGTVTAVSSKDETLTGGRIVRYV 229

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--------------------- 253
            +         +      ++ +  + L        E  L                     
Sbjct: 230 TIEAANPGGLTTEQSAAASVGDYSSSLEGTFSPVVETILSADLPDSVTVEQLLVSEGDYA 289

Query: 254 ------------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                            ++     L+  +       SK+   + +    TI +PI+GT++
Sbjct: 290 AKGAPIFRFDRESADKLMRSFREKLDSAKDAMDSANSKIESTKSSMNNYTITAPISGTVI 349

Query: 302 ------YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
                  ++  S  +       +M ++           +    I  VK G T  +     
Sbjct: 350 RKNMKAGDKITSKGS----GDGVMAVIYDLSSITFSMSIDELDISKVKTGQTVQITAEAA 405

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            D     F+ I+E +      +  N      Y V + + D         L  G       
Sbjct: 406 GDA---SFRGIVENVSL----ESANNNGITTYPVSVTVKDPK------GLLPGMNVNGKI 452

Query: 416 TAKN 419
             + 
Sbjct: 453 LLEE 456


>gi|186472342|ref|YP_001859684.1| RND family efflux transporter MFP subunit [Burkholderia phymatum
           STM815]
 gi|184194674|gb|ACC72638.1| efflux transporter, RND family, MFP subunit [Burkholderia phymatum
           STM815]
          Length = 381

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 59/170 (34%), Gaps = 27/170 (15%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILL-------------PIEISVS----------SSGEIL 51
              +R+ +++ I  +G+I W                 P+ I             + G + 
Sbjct: 5   RPSRRLLVVACIAAVGVIVWQAYAAFHKPQHPAAQETPVTIGTVQRADVPLQLDALGTVT 64

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRC 108
               V  +K+  +G ++   V+ G ++  G P+   +       +   + ++   + L  
Sbjct: 65  PRATV-TVKTQVNGTLEAVLVKEGQRVNAGQPIARIDSRALRAQLLEAQGTLEHDEALLA 123

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           +   + +  + L +   +  +  +++   L  + G   +    V N  + 
Sbjct: 124 NAKADLARYETLIDGGSISRQTLDTQRATLRQYQGTVKADEGSVANLRVQ 173


>gi|15640648|ref|NP_230277.1| hypothetical protein VC0628 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587954|ref|ZP_01677708.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121728276|ref|ZP_01681308.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147674168|ref|YP_001216122.1| hypothetical protein VC0395_A0157 [Vibrio cholerae O395]
 gi|153822979|ref|ZP_01975646.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227080809|ref|YP_002809360.1| Nodulation protein nolF [Vibrio cholerae M66-2]
 gi|229505750|ref|ZP_04395260.1| membrane-fusion protein [Vibrio cholerae BX 330286]
 gi|229509217|ref|ZP_04398702.1| membrane-fusion protein [Vibrio cholerae B33]
 gi|229519574|ref|ZP_04409017.1| membrane-fusion protein [Vibrio cholerae RC9]
 gi|229608861|ref|YP_002879509.1| membrane-fusion protein [Vibrio cholerae MJ-1236]
 gi|254850862|ref|ZP_05240212.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744155|ref|ZP_05418108.1| membrane-fusion protein [Vibrio cholera CIRS 101]
 gi|262155729|ref|ZP_06028853.1| membrane-fusion protein [Vibrio cholerae INDRE 91/1]
 gi|262169929|ref|ZP_06037619.1| membrane-fusion protein [Vibrio cholerae RC27]
 gi|298500744|ref|ZP_07010547.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9655062|gb|AAF93794.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547801|gb|EAX57889.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121629470|gb|EAX61897.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126519486|gb|EAZ76709.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146316051|gb|ABQ20590.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227008697|gb|ACP04909.1| Nodulation protein nolF [Vibrio cholerae M66-2]
 gi|227012453|gb|ACP08663.1| Nodulation protein nolF [Vibrio cholerae O395]
 gi|229344263|gb|EEO09238.1| membrane-fusion protein [Vibrio cholerae RC9]
 gi|229353789|gb|EEO18725.1| membrane-fusion protein [Vibrio cholerae B33]
 gi|229357973|gb|EEO22890.1| membrane-fusion protein [Vibrio cholerae BX 330286]
 gi|229371516|gb|ACQ61939.1| membrane-fusion protein [Vibrio cholerae MJ-1236]
 gi|254846567|gb|EET24981.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738095|gb|EET93487.1| membrane-fusion protein [Vibrio cholera CIRS 101]
 gi|262021663|gb|EEY40374.1| membrane-fusion protein [Vibrio cholerae RC27]
 gi|262030440|gb|EEY49080.1| membrane-fusion protein [Vibrio cholerae INDRE 91/1]
 gi|297540525|gb|EFH76583.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 366

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 20/183 (10%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLE--QNQRTFADEMSKLTILEKTREQKTI 292
            + +     +     E N   A   K +  ++          D  S L+ +++  +   +
Sbjct: 120 AQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQV 179

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +         ++     P+  I+       I A V+ + IQHV+    A +RF
Sbjct: 180 RAPFDGVVETLPI-EKGDFVGIGDPVASII-DLHKLVIEADVSERHIQHVQLEQAARIRF 237

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                I   + +  +  I  + S   N       + + +++ +   +     +  G  AE
Sbjct: 238 -----IDGTQTQGKVRYISRLSSPATNT------FAIEVEVDNPQQA-----IPAGVSAE 281

Query: 413 VLF 415
           V  
Sbjct: 282 VEL 284



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I + ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIELYGRTAPDRQAK-IGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 127 AQLKVRQ----QEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 183 FDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLEQAA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGTQTQGKVRYISRL 253


>gi|332827331|gb|EGK00091.1| hypothetical protein HMPREF9455_03557 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 398

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 91/289 (31%), Gaps = 44/289 (15%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR--ALLSSHQKDLTMMKNLFEKNAVSQND 215
            SV   L     +   I L +++  + +S++R    ++   +    + +L     + +  
Sbjct: 41  ESVEVELTESQMKAVDIQLGKIEQRDLNSIIRVNGEMALDPQKKAEVTSLL--GGIIKQV 98

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE---------ISRDL 266
           +  + R V            E   + ++      EA +    Y ++         + + L
Sbjct: 99  MVIEGRAVSAGQAVAYLENTEIVELQKNYLTTKKEALIADQEYRRQKDLSTQGAGVEKTL 158

Query: 267 EQNQRTFADEMSKLTILEKTREQKTI----------------LSPIAGTIVYNQSFSSSN 310
           +Q    +    ++LT LEK   Q +I                 +PI+GT+      +  +
Sbjct: 159 QQATANYEITKAQLTGLEKQLRQLSISPEQVSSGNMVTQIPIKTPISGTVSKINIST-GS 217

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           Y     PLM I   +   +   KV  K I  V+ G    +      +      K  I +I
Sbjct: 218 YVDMQTPLMSIT-DNAGIHCDVKVFEKDINMVRIGQEVDITLT---NQPGVNLKGEIYEI 273

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +                   + +        +I+L  G     L     
Sbjct: 274 NKSFEGDTKA----------IIVHANIKGKTDIKLIPGMYVTGLINVGK 312



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 2/133 (1%)

Query: 40  IEISVSSSGEILNEDNVV-EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +   +  +GE+  +     E+ S   GIIK+  V  G  +  G  +   E+ E  + +  
Sbjct: 67  LNSIIRVNGEMALDPQKKAEVTSLLGGIIKQVMVIEGRAVSAGQAVAYLENTEIVE-LQK 125

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             ++ K      D E      L+ +   +EK  +           +      ++    IS
Sbjct: 126 NYLTTKKEALIADQEYRRQKDLSTQGAGVEKTLQQATANYEITKAQLTGLEKQLRQLSIS 185

Query: 159 SVYRSLKMKLTRM 171
               S    +T++
Sbjct: 186 PEQVSSGNMVTQI 198


>gi|91224240|ref|ZP_01259503.1| putative HlyD family secretion protein [Vibrio alginolyticus 12G01]
 gi|91191151|gb|EAS77417.1| putative HlyD family secretion protein [Vibrio alginolyticus 12G01]
          Length = 391

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 81/293 (27%), Gaps = 54/293 (18%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q+   + +           G          +   ++    +   L  +    +A +   
Sbjct: 63  AQVSGQIQRLAVNLGDEIKQGDLIAQIDSLTQQNSLKEAQASLNSLNAQYQAKQAQIKQA 122

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +    K +    A S+ D    E  +     EL +   E +    +++          
Sbjct: 123 NYEYVRQKGMLAAKASSRADYENAEATLAIYKAELAQLDAEIEKAKINVDN--------- 173

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                       +      TI +P+ GT+VY            +
Sbjct: 174 ---------------------------AQLDLGYTTINAPMDGTVVYTAV-EEGQTVNAN 205

Query: 316 QPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP- 372
           Q    I+  +      ++A+++   +  V  G TA   F       + +FK  +  I+P 
Sbjct: 206 QTTPTIIELAKLDTMTVKAEISEADVIFVHPGQTA--LFTILGKPNQ-QFKGTLRAIEPG 262

Query: 373 ------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   S    +     YY  +  +      +    LR G  A+V    + 
Sbjct: 263 PTIMDGDDSDLSISDSDAIYYNAVFDV-----KNPQGILRIGMTAQVSIVLEQ 310



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 53/130 (40%), Gaps = 3/130 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE +V ++G +     +V + +  SG I++  V  G +I QG  +   + +   + + 
Sbjct: 41  GNIEKAVLANGMLQAS-KLVNVGAQVSGQIQRLAVNLGDEIKQGDLIAQIDSLTQQNSLK 99

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S+ +L      +++ +   N +Y   +    ++     D+     +    ++   +
Sbjct: 100 EAQASLNSLNAQYQAKQAQIKQANYEYVRQKGMLAAKASSRADYENAEATLA--IYKAEL 157

Query: 158 SSVYRSLKMK 167
           + +   ++  
Sbjct: 158 AQLDAEIEKA 167


>gi|82543240|ref|YP_407187.1| hypothetical protein SBO_0683 [Shigella boydii Sb227]
 gi|123560220|sp|Q323Z9|YBHG_SHIBS RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|81244651|gb|ABB65359.1| putative membrane protein [Shigella boydii Sb227]
          Length = 332

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 127 AQNFYNRQQGLWKSRTISAN-DLENARSSRNQAQATLKSAQDKLRQYRSGNREQDIAQAK 185

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 186 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 243

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 244 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 300

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 301 VYRLRIVVTDADDA-----LRQGMPVTV 323



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 93/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++  ++  +   ++  D +   
Sbjct: 52  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQVKAGVSVAQAQYDLMLAG 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 105 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRNQAQ- 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 160 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 203

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 204 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 263

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 264 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 320

Query: 348 ATVRF 352
            TV+F
Sbjct: 321 VTVQF 325


>gi|110640999|ref|YP_668727.1| hypothetical protein ECP_0809 [Escherichia coli 536]
 gi|191174502|ref|ZP_03036001.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli F11]
 gi|227884243|ref|ZP_04002048.1| secretion protein HlyD [Escherichia coli 83972]
 gi|300992079|ref|ZP_07179781.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 200-1]
 gi|300993269|ref|ZP_07180316.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 45-1]
 gi|301051286|ref|ZP_07198112.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 185-1]
 gi|123148254|sp|Q0TJQ3|YBHG_ECOL5 RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|110342591|gb|ABG68828.1| hypothetical membrane protein YbhG [Escherichia coli 536]
 gi|190905215|gb|EDV64855.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli F11]
 gi|227838995|gb|EEJ49461.1| secretion protein HlyD [Escherichia coli 83972]
 gi|300297045|gb|EFJ53430.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 185-1]
 gi|300305408|gb|EFJ59928.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 200-1]
 gi|300406677|gb|EFJ90215.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 45-1]
 gi|307552640|gb|ADN45415.1| hypothetical membrane protein YbhG [Escherichia coli ABU 83972]
 gi|315292602|gb|EFU51954.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 153-1]
 gi|324011110|gb|EGB80329.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 60-1]
          Length = 331

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLVAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +      K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPNKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLVAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPNKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|114562989|ref|YP_750502.1| RND family efflux transporter MFP subunit [Shewanella frigidimarina
           NCIMB 400]
 gi|114334282|gb|ABI71664.1| efflux transporter, RND family, MFP subunit [Shewanella
           frigidimarina NCIMB 400]
          Length = 432

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 71/235 (30%), Gaps = 34/235 (14%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLEL----------RENIHEQKNMLRHINEL-------YD 249
           +   +++ D +Q +  V ++   L             I E KN L    EL         
Sbjct: 112 KDQVLARMDTDQLQAKVNQAKASLDWAKAQVKQVEATIIETKNSLSRSRELAKTGMCSVQ 171

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E     A Y + +  +L   +       + L     T  + TI SPI G ++  +     
Sbjct: 172 ECEASQATYDRTV-ANLASAKAQVVQSQAALDSELTTLAKATIHSPIDGIVL-IRDVEPG 229

Query: 310 NYAQQS--QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                S   P+M  +  +     +   V    +  +  G  A      YA+       + 
Sbjct: 230 QTMAASFQTPVMFTLAENLTQMELHVDVDEADVGQISVGQEALFTVDAYANRNFPAKISE 289

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           +      +            YE +L + + A       LR G  A      K  +
Sbjct: 290 VHFASQTVDGVVT-------YETVLIVDNSALL-----LRPGMTATADILVKQVS 332



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 50/134 (37%), Gaps = 3/134 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + I+V+++G +   + V E+ S  SG IK   V+    + +   L   +  +    ++  
Sbjct: 73  LSITVTATGTLEPVNQV-EVGSEISGTIKTVLVDFNDYVKKDQVLARMDTDQLQAKVNQA 131

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K S+   +  +   ++ +    N      +  ++    + +      +    V N  ++S
Sbjct: 132 KASLDWAKAQVKQVEATIIETKNSLSRSRELAKTGMCSVQECEASQATYDRTVAN--LAS 189

Query: 160 VYRSLKMKLTRMRS 173
               +      + S
Sbjct: 190 AKAQVVQSQAALDS 203


>gi|307609457|emb|CBW98951.1| hypothetical protein LPW_07361 [Legionella pneumophila 130b]
          Length = 281

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 71/221 (32%), Gaps = 18/221 (8%)

Query: 206 FEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEI 262
            +K  V ++ D +     +  +  +L + I  QKN  R     E   +          + 
Sbjct: 68  VKKGQVLARLDKDTFIANLETAKAQLEQAIANQKNASRTYKRREQLVDDGAVSKALFDDA 127

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
               + +    +   + L   + +     I +P  GTI+  +          ++P+  + 
Sbjct: 128 VAMKDSSSAEVSVAKANLEKAQISLNDTEIHAPTHGTILT-RIQEPGAIVNVAEPVYTLA 186

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS-----QQ 377
                 ++R  +    +  +  G  A V   +     EK +K  I  I P         +
Sbjct: 187 -IDNPVWVRTYIDEPFLGRIYPGQDALV---YTDSNPEKPYKGHIGFISPQAEFTPKIVE 242

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
              L+T   Y + + I           LR G P  V    K
Sbjct: 243 TTQLRTDLVYRIRVVIDQPDNG-----LRQGMPVTVKIHLK 278



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 31/106 (29%), Gaps = 3/106 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFL 120
           SG I    V+ G+ + +G  L   +       ++  K  ++       +        + L
Sbjct: 54  SGRILSMDVDEGAHVKKGQVLARLDKDTFIANLETAKAQLEQAIANQKNASRTYKRREQL 113

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            +   V +  F+           +     + +    IS     +  
Sbjct: 114 VDDGAVSKALFDDAVAMKDSSSAEVSVAKANLEKAQISLNDTEIHA 159


>gi|253689692|ref|YP_003018882.1| efflux pump membrane protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756270|gb|ACT14346.1| efflux pump membrane protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 391

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 86/262 (32%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L   + +   + +N    +    L +  L+  Q DL+  + L   NA+ +
Sbjct: 99  EQALERAKTGLANSVRQTHQLIINSKQYQANIELRQTELNKAQSDLSRREALGSANAIGR 158

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++      V  +   L     + +     I +   E          E+           
Sbjct: 159 EEVQHARDAVATAKAALEVARQQYQANQAMILDTPLEKQPAIQQASVEMRDAWL------ 212

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         ++  I+SPI G +   +S         +  LM +VP +   ++ A 
Sbjct: 213 ------------ALQRTKIVSPIDGYVSR-RSVQIGARISSTSALMAVVPANH-LWVDAN 258

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G  ATV    Y D     ++  +  +D          P  +   N ++ 
Sbjct: 259 FKETQLANMRIGQPATVVADIYGDDV--VYQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 316

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++     +++ + +
Sbjct: 317 VQRLPVRIELDPQQVAEHPLRI 338



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 58/187 (31%), Gaps = 10/187 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN------ 105
              N ++I +  SG +    V+N   + QG  L+  +  +    ++  K  + N      
Sbjct: 58  VAGNQIQIMAQVSGSVTHVNVDNTDFVKQGQVLVELDPTDAEQALERAKTGLANSVRQTH 117

Query: 106 -LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    ++ ++    + +  +     RE                      +     +
Sbjct: 118 QLIINSKQYQANIELRQTELNKAQSDLSRREALGSANAIGREEVQHARDAVATAKAALEV 177

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
             +  +     +    LE + ++ +A +      L + +          VS+  +    R
Sbjct: 178 ARQQYQANQAMILDTPLEKQPAIQQASVEMRDAWLALQRTKIVSPIDGYVSRRSVQIGAR 237

Query: 222 IVYKSTL 228
           I   S L
Sbjct: 238 ISSTSAL 244


>gi|228954837|ref|ZP_04116857.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228804826|gb|EEM51425.1| multidrug resistance protein A [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 225

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 59/170 (34%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +   +  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 65  KLTEWKAEVGKNYNEN-----DKLGTVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 118

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 119 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQNVDVYVDAYPDTT---LTGKVEQVGL 174

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 175 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVTVRIH 224


>gi|239817286|ref|YP_002946196.1| secretion protein HlyD family protein [Variovorax paradoxus S110]
 gi|239803863|gb|ACS20930.1| secretion protein HlyD family protein [Variovorax paradoxus S110]
          Length = 327

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 63/212 (29%), Gaps = 25/212 (11%)

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           Q   +    + L +   E +      + +  EA  +    + +    L+  +        
Sbjct: 108 QRIAISNQRITLAQAQRESRRNADLGDLISLEAREQSRLKVDQAKGALQAAEAALRQAQV 167

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            L       E+  + +P AG +          YA    P+M +V  +   Y+       +
Sbjct: 168 ALNASTLNLERTQVRAPTAGLVTNLDLR-QGAYASAGHPVMALV-DADSIYVEGYFEENK 225

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-------------- 384
           +  + +G    V       +     +  +E I   I+ +D +  T               
Sbjct: 226 LARIHQGDRVRV-----TPMGGPALEGTVESIAAGIADRDRSTSTNLLPSVNPTFNWVRL 280

Query: 385 -EYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +   V +K+     + +   L  G    V  
Sbjct: 281 AQRVPVRVKLDQ---TPSGTRLVAGQTVTVEI 309



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 65/191 (34%), Gaps = 15/191 (7%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSS----GEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           LL  + ++    W+     +    +     G +    NVV++    SG++    V +   
Sbjct: 22  LLVTVLMVAAAGWAGWRLWDHYELAPWTRNGRV--RANVVQVAPDVSGMVANVAVHDNQS 79

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L + +       ++  + + +  R  I  ++  L     +          R   
Sbjct: 80  VAAGALLFSVDKARFELALEQAQAAAETQRIAISNQRITLAQAQRES--------RRNAD 131

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L D +       S++         ++ +  L R   + LN   L  + + +RA  +    
Sbjct: 132 LGDLISLEAREQSRLKVDQAKGALQAAEAAL-RQAQVALNASTLNLERTQVRAPTAGLVT 190

Query: 198 DLTMMKNLFEK 208
           +L + +  +  
Sbjct: 191 NLDLRQGAYAS 201


>gi|171317555|ref|ZP_02906743.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MEX-5]
 gi|171097249|gb|EDT42096.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MEX-5]
          Length = 349

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/367 (11%), Positives = 104/367 (28%), Gaps = 81/367 (22%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P++  R+  L+I+ + G+   +       +  S+ +   + ++V + SP  G I +  V 
Sbjct: 9   PSTKGRVIALAIVAL-GIAALAYAYHRTSAYPSTDDASIDADLVHVASPVGGRIVRLAVH 67

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++ +G  L   + +            +   +   D E +                  
Sbjct: 68  ENQRVAKGDLLYEIDPVPYR---------LTVAQAQADVELARA---------------- 102

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                                        SL  +   +   + N      +         
Sbjct: 103 -----------------------------SLDTRRRSLIGEHSNAAVAAEQVKRATQNYD 133

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              +D+  +  L  +  VS    +Q +     + + L +   +Q++  + I         
Sbjct: 134 LATRDVNRLAPLAAQGYVSAQQFDQAKVRQRDAAVSLAQAKEQQRSSAQTIG-------- 185

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                      D      T     + L   +   +   + +P  G +      +      
Sbjct: 186 -----------DDADAIATLHAREAALARAQHALDDTVVRAPHDGLVTGLTVLA-GETLA 233

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDP 372
            +Q +  ++  S+   +        +  +  G  ATV    Y+ I R +     +  I  
Sbjct: 234 PNQSIFTLIDASEWFAV-GNFRETSLNRIAVGDCATV----YSMIDRSRPLTGKVVGIGA 288

Query: 373 IISQQDN 379
            I+  D 
Sbjct: 289 GIADSDR 295


>gi|332097395|gb|EGJ02375.1| hlyD family secretion family protein [Shigella boydii 3594-74]
          Length = 331

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRNQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 93/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++  ++  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQVKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRNQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|330950910|gb|EGH51170.1| secretion protein HlyD [Pseudomonas syringae Cit 7]
          Length = 386

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 4/188 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V+ G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVKEGQQVKAGDLLATLDDRSIRAALEQARAQL 113

Query: 104 KNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +  +D  +  L     L  +  +  + F+ ++  +           + +    +   
Sbjct: 114 AQSKAQLDVAQLDLKRYRQLTQENGISRQTFDQQQALVRQLEATAKGNEASINASQVQLS 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y  ++  +T    I         + S    L S  Q D   ++    +  +        E
Sbjct: 174 YTQIRSPVTGRVGIRNVDEGNFLRVSDAAGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAE 233

Query: 221 RIVYKSTL 228
           R       
Sbjct: 234 RDAATVKA 241



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 76/252 (30%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L ++       +   + +       +R  + + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVKEG----QQVKAGDLLATLDDRSIRAALEQARAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTQENGISRQTFDQQQALVRQLEATAKGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P     + +   A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDAAGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAERDAA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TV+              +  +  ID  +S     ++               F +   +L 
Sbjct: 238 TVKAYQGDGAANGLLLGEGTLSLIDNQVSASTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|296448648|ref|ZP_06890515.1| secretion protein HlyD family protein [Methylosinus trichosporium
           OB3b]
 gi|296253850|gb|EFH01010.1| secretion protein HlyD family protein [Methylosinus trichosporium
           OB3b]
          Length = 333

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 77/243 (31%), Gaps = 33/243 (13%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                +E   +   A+L + Q+ L     L +K A S+                  +   
Sbjct: 105 EEIAQVEATVAEREAMLLNAQQTLERSDQLMKKGAGSRQT--------------SEDATA 150

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            Q+     +        L    + KE   +++  +   A+  +   I  +      + +P
Sbjct: 151 AQREAEARLRSARHALRLMQIGFRKE---EIDVARAQLAESEAVAQISARQLADAELAAP 207

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            AG I+  +           + +  +   +   ++R+ V+   +  V+ G    V     
Sbjct: 208 SAGVILS-RVREVGAIVDAGETVF-VSSLTTPVWVRSYVSEPDLPRVRPGMPVAVT---- 261

Query: 356 ADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           AD     F+  +  I         S +   L+T   Y + + + D         LR G P
Sbjct: 262 ADGGAGPFEGRLGFISTTAEFTPKSVETRELRTALVYRLRVLVDDP-----GGVLRQGMP 316

Query: 411 AEV 413
             +
Sbjct: 317 VTI 319



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G IK+  V+ G  I +G  +   + I   + +   +        ++    + L+  N  
Sbjct: 49  GGRIKRLLVDEGDHIAEGQTIAVLDKIYFEEALSQAQAQRDQAAANL----AKLEAGNRP 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++ +      E + +    +     S       +   ++ +      R          +
Sbjct: 105 EEIAQVEATVAEREAMLLNAQQTLERSDQLMKKGAGSRQTSEDATAAQREAEARLRSARH 164

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
              L++      + D+   + L E  AV+Q    Q 
Sbjct: 165 ALRLMQIGFRKEEIDVARAQ-LAESEAVAQISARQL 199


>gi|226225927|ref|YP_002760033.1| multidrug resistance protein [Gemmatimonas aurantiaca T-27]
 gi|226089118|dbj|BAH37563.1| multidrug resistance protein [Gemmatimonas aurantiaca T-27]
          Length = 420

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 67/190 (35%), Gaps = 6/190 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +   V ++G++   +  V ++S  SG + +  +  G ++ QG  L   +      
Sbjct: 52  AAKGALPYIVVANGQVEP-NRTVAVQSLVSGQLTRIAIAEGDEVSQGQVLFEIDPRPFRA 110

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   + ++      +   ++     + ++  L       ++QL     +  +  + V  
Sbjct: 111 ELQRVQATLARDEATLVRARAD----SARFAALASDGYVTKQQLDQAFAEVSALSATVSA 166

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              S       ++ T +++    R   L  ++  L    +     +  ++ +  +  V +
Sbjct: 167 NRASLDRARFDLENTVVKAPISGRTGQLLFRAGALVRASTDQLVTINELRPVLVRFPVPE 226

Query: 214 NDLNQQERIV 223
            D  +  R  
Sbjct: 227 KDFEEMRRRA 236



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 57/195 (29%), Gaps = 14/195 (7%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + +L + +  + +    L     +        ++ Y          L +   ++     T
Sbjct: 109 RAELQRVQATLARDEATLVRARADSARFAALASDGYV-----TKQQLDQAFAEVSALSAT 163

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            +   + L       E   + +PI+G       F +    + S   +  +   +   +R 
Sbjct: 164 VSANRASLDRARFDLENTVVKAPISGR-TGQLLFRAGALVRASTDQLVTINELRPVLVRF 222

Query: 333 KVTPKQIQHVK----KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            V  K  + ++          V+         K  KA +  +D  + +   ++      +
Sbjct: 223 PVPEKDFEEMRRRAGVDKPLAVKVTPNGADTTKSIKATLTFVDNQVDRTTGSVLL----K 278

Query: 389 VILKITDLAFSDNNI 403
             +   D A      
Sbjct: 279 ARVPNEDRALWPGQF 293


>gi|91209827|ref|YP_539813.1| hypothetical protein UTI89_C0796 [Escherichia coli UTI89]
 gi|122424507|sp|Q1RED2|YBHG_ECOUT RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|91071401|gb|ABE06282.1| hypothetical membrane protein YbhG [Escherichia coli UTI89]
          Length = 332

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 127 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 185

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 186 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 243

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +      K +   I  + P       + +  +L+T  
Sbjct: 244 RAYVDERNLDQAQPGRKVLL---YTDGRPNKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 300

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 301 VYRLRIVVTDADDA-----LRQGMPVTV 323



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 93/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +        +  ++++   +  +   ++  D +   
Sbjct: 52  GGRVESLAVDEGDAIKAGQVLGELDH-------NPYEIALMQAKAGVSVAQAQYDLMLAG 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 105 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 160 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 203

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 204 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 263

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 264 YTDGRPNKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 320

Query: 348 ATVRF 352
            TV+F
Sbjct: 321 VTVQF 325


>gi|52841087|ref|YP_094886.1| membrane fusion protein [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|54296872|ref|YP_123241.1| hypothetical protein lpp0913 [Legionella pneumophila str. Paris]
 gi|52628198|gb|AAU26939.1| membrane fusion protein [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|53750657|emb|CAH12064.1| hypothetical protein lpp0913 [Legionella pneumophila str. Paris]
          Length = 338

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 80/241 (33%), Gaps = 24/241 (9%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE-QKNMLRHIN 245
            ++A+ ++   + T+M  +  +N      LN  E         L     E  ++ L+ + 
Sbjct: 40  AVQAVYATGTVEPTVMMPIASQNTARLVKLNADEGSEVVKGQILASLEDEHLQHNLKELK 99

Query: 246 ELYDEANLEFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           E    A + +    + + +      + ++    +    + +  +E       +++P  G 
Sbjct: 100 EHETLAKIRYERNAQLVKKGVISKDEYDRTLSEWQAASAAVRRIEAQISYLQLIAPADGR 159

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I+  +          +QP+  +        + A+V  + I  V+ G    +R   + +  
Sbjct: 160 IIK-RDGEVGQLIPANQPVFWLS-CCAPLRVSAEVDEEDIVLVRVGQKVLIRSDAFPNQI 217

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              F   ++ I P       +      Y V +  ++      N  L  G  AE       
Sbjct: 218 ---FYGRVKSITPKGDPIARS------YRVRINFSE------NNPLLIGMTAETNIIVHE 262

Query: 420 T 420
            
Sbjct: 263 K 263


>gi|1296662|emb|CAA91196.1| plectin [Homo sapiens]
          Length = 4684

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 59/199 (29%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1480 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRIQEEVV 1539

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++    +    +  +++ K+    A   S  +    ++       
Sbjct: 1540 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR------- 1592

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1593 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1651

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1652 VELASRVKAEAEAAREKQR 1670



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2320 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2375

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2376 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2435

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2436 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2495

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2496 EETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2539



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2369 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2428

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2429 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2488

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2489 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2548

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2549 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2579



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 6/148 (4%)

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +     ++            ++  L + R +       + ++      L    ++  + +
Sbjct: 1482 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRIQEEVVRR 1541

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                       D  QQ+R + +   +LR++   +        E  + + L     ++ + 
Sbjct: 1542 EEAA------VDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR 1595

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
              LE  +R       +L  L    E+  
Sbjct: 1596 LQLEATERQRGGAEGELQALRARAEEAE 1623



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 66/193 (34%), Gaps = 9/193 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++        +  ++ LR   + E   +     + +  E++    EE++     +  +T 
Sbjct: 1546 VDAQQQKRSIQEELQQLRQSSEAE---IQAKARQAEAAERSRLRIEEEIRVVRLQLEATE 1602

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +            L+    R       +   + ++  LR  +    +     +      
Sbjct: 1603 RQ-----RGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASR 1657

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQ 268
              ++ +  ++++   ++  ELR    E +  L     E   +  +      +    +L+ 
Sbjct: 1658 VKAEAEAAREKQRALQALEELRLQAEEAERWLCQAEVERARQVQVALETAQRSAEAELQS 1717

Query: 269  NQRTFADEMSKLT 281
             + +FA++ ++L 
Sbjct: 1718 KRASFAEKTAQLE 1730



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/200 (10%), Positives = 60/200 (30%), Gaps = 12/200 (6%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + + LR  +  E+        + +  ++  E+  E       +  +   +       
Sbjct: 1772 QLKANEALRLRLQAEEVLQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1831

Query: 159  SVYRSLKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
               R L     + R +     + L  ++          +++L     L  + A +     
Sbjct: 1832 EKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQ 1888

Query: 218  QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            + E  + K   E+   +  +           +++                   R  A+E 
Sbjct: 1889 ELEAELAKVRAEMEVLLASKAKAEEESRSTSEKSKQRLEAEAGRF--------RELAEEA 1940

Query: 278  SKLTILEKTREQKTILSPIA 297
            ++L  L +  +++  L+   
Sbjct: 1941 ARLRALAEEAKRQRQLAEED 1960



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 56/199 (28%), Gaps = 2/199 (1%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +      +  L        S       + + L +   + E + L  +        ++  
Sbjct: 1455 DLRTHYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1514

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  ++ +      + I    +  E  +   +    S Q++L  ++   E    ++ 
Sbjct: 1515 AHAQAKAQAEREAKELQQRIQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKA 1574

Query: 215  DLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
               +  ER   +   E+R    + +   R       E         +E      Q Q   
Sbjct: 1575 RQAEAAERSRLRIEEEIRVVRLQLEATERQRGGAEGELQA-LRARAEEAEAQKRQAQEEA 1633

Query: 274  ADEMSKLTILEKTREQKTI 292
                 ++    + + Q  +
Sbjct: 1634 ERLRRQVQDESQRKRQAEV 1652



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2457 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2516

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL R+  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2517 AEAERLKL-RVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2574

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2575 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2614



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/208 (12%), Positives = 71/208 (34%), Gaps = 16/208 (7%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                +    + + ++    + +++++      +   LE++ +     +     +      
Sbjct: 1696 RARQVQVALETAQRSAEAELQSKRASFAEKTAQ---LERSLQEEHVAVAQLREEAERRAQ 1752

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL----- 205
            +      +      +++  ++++    RL L+ +  L +  L+  + +    +       
Sbjct: 1753 QQAEAERAREEAERQLERWQLKANEALRLRLQAEEVLQQKSLAQAEAEKQKEEAEREARR 1812

Query: 206  ---FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE- 261
                E+ AV Q +L +QE    +   E       Q+ +      +   A  E     ++ 
Sbjct: 1813 RGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGEQQRQL 1868

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +  +L + QR  A    K   LE    +
Sbjct: 1869 LEEELARLQREAAAATQKRQELEAELAK 1896



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 73/212 (34%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1593 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1646

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     L        + + +  
Sbjct: 1647 KRQAEVE--LASRVKAEAEAAREKQRALQALEELRLQAEEAERWLCQAEVERARQVQVAL 1704

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1705 ETAQRSA--EAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1762

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R LE+ Q    + +      E+  +QK++
Sbjct: 1763 EAERQLERWQLKANEALRLRLQAEEVLQQKSL 1794



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 61/204 (29%), Gaps = 8/204 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E T L    ++++K      +  +   +    +   LE       EQ            +
Sbjct: 1981 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLE-------EQAAQHKADIEERLA 2033

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            ++     S + R   +    +R       ++    +      ++ + +L +       NA
Sbjct: 2034 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEK-AAAGKAELELELGRIRSNA 2092

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                   +Q  +      +L      ++       +    A  E A   K    ++E+ +
Sbjct: 2093 EDTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLK 2152

Query: 271  RTFADEMSKLTILEKTREQKTILS 294
                +  S     E+   ++  L+
Sbjct: 2153 AKVEEARSLRERAEQESARQLQLA 2176


>gi|121601725|ref|YP_988455.1| MFP family transporter [Bartonella bacilliformis KC583]
 gi|120613902|gb|ABM44503.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Bartonella bacilliformis KC583]
          Length = 333

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 70/187 (37%), Gaps = 3/187 (1%)

Query: 20  MTLLSIIGIIG--LITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
             +  I GI+G  LI W+  L P   ++  +     + NV  I S  SG+I +  V++  
Sbjct: 10  TIVAFISGIVGILLILWAWQLPPFVSAIQVTNNAAIKGNVTPISSQISGVIARVHVQDYQ 69

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++ +G  L   +D      +   K ++ +    +      ++ L  +  + E      +E
Sbjct: 70  RVERGQVLFELDDAVFQQQLVRAKANLDSKNTKLAYILLKVEALQGEIKIAEAELAHLQE 129

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                     +         +S    +L+MK    + +   +  L+      RA +   +
Sbjct: 130 ISASKSQIPGTNKPFHAVPSLSQSLATLEMKYQLQKQLDFEQQSLQFDIMGARAGVELAE 189

Query: 197 KDLTMMK 203
            +L+  K
Sbjct: 190 LNLSHAK 196



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/330 (13%), Positives = 96/330 (29%), Gaps = 29/330 (8%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           I   +S    +     ++         QL  F+     T +      ++ +   +   + 
Sbjct: 2   IRALRSKSTIVAFISGIVGILLILWAWQLPPFVSAIQVTNNAAIKGNVTPISSQISGVIA 61

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-----AVSQNDLNQQERIVY 224
           R+      R++       L   +   Q+ +    NL  KN      + + +  Q E  + 
Sbjct: 62  RVHVQDYQRVERGQVLFELDDAV-FQQQLVRAKANLDSKNTKLAYILLKVEALQGEIKIA 120

Query: 225 KSTLELRENIHEQKNMLRHINE--------LYDEANLEFA-NYLKEISRDLEQNQRTFAD 275
           ++ L   + I   K+ +   N+            A LE      K++  + +  Q     
Sbjct: 121 EAELAHLQEISASKSQIPGTNKPFHAVPSLSQSLATLEMKYQLQKQLDFEQQSLQFDIMG 180

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             + + + E       I+SP  G I          Y      L+ ++  S   +I A   
Sbjct: 181 ARAGVELAELNLSHAKIISPDTGYI-GLVGVKVGQYVMPGTQLVFVI--SDDIWILAHYK 237

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVIL 391
             Q+  ++ G           D +       +    P    +      +     + +V  
Sbjct: 238 ETQLSRMRVGQPVVFSVDALNDQK---LTGHVVSFAPATGSEFSFLKTDKAIGNFIKVAQ 294

Query: 392 KIT-DLAFSDNNI---ELRNGFPAEVLFTA 417
           +I+  +A          L  G         
Sbjct: 295 RISVRIALDPEQSRIDRLIPGMSVVTYVDT 324


>gi|262396200|ref|YP_003288053.1| multidrug resistance efflux pump [Vibrio sp. Ex25]
 gi|262339794|gb|ACY53588.1| multidrug resistance efflux pump [Vibrio sp. Ex25]
          Length = 311

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 72/223 (32%), Gaps = 24/223 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S+ +   +     + ++ + +         +        R+ L+  Q +     +L ++ 
Sbjct: 56  SRPYLLAVKQAKAAYQLAVQQHDVADKQVTEAVAGLDAARSNLTEAQVEYKRTDSLVKRK 115

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             S  DL+  +  +  +   L +     +  + +  E   EA +      +         
Sbjct: 116 LASDQDLDTAKNKLANAQASLEQARATVEKAIANRGEEGAEAAVVQQAAAQ--------- 166

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                     L   E       I SP+ G      +    +     Q L  ++      +
Sbjct: 167 ----------LAQAELNLSYTDITSPVDGIAGEINTH-VGSVVSVGQTLFPVI-LKDSYW 214

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +RA      + H+K G  A V    Y D+    +KA +E++ P
Sbjct: 215 VRANFKETDLTHIKAGMHADVVIDMYPDV---VWKATVEQLSP 254


>gi|325982551|ref|YP_004294953.1| efflux transporter, RND family, MFP subunit [Nitrosomonas sp.
           AL212]
 gi|325532070|gb|ADZ26791.1| efflux transporter, RND family, MFP subunit [Nitrosomonas sp.
           AL212]
          Length = 386

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 63/181 (34%), Gaps = 20/181 (11%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLP----IEISVSSSGEILNE------DNVVEIK 60
           R+    L+ +  +++   I L +W    P    ++++V ++G++           V   +
Sbjct: 6   RSVNKVLRLVVFIAVASAIALASWHYTRPKPLEVDLAVITTGDVEATIVNTRAGTVKSCQ 65

Query: 61  -----SPFSGIIKKFQVENGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCH---I 110
                    G I K  V+ G  + +G  LL    +D++    +  ++++I   R     I
Sbjct: 66  RSNLAPITGGKIVKIWVKEGDHVQKGQVLLELWNQDLKAQRELAQRQLTIAQERRRETCI 125

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             + +  + +  +  V +    S+         +      +     I      + +    
Sbjct: 126 LAQNAQRESIRTQQLVEQGFVSSQRFDDAHANARSRQASCEAAISDIKRAEAQIHVSQAG 185

Query: 171 M 171
           +
Sbjct: 186 I 186



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 73/201 (36%), Gaps = 15/201 (7%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-EL 247
           + LL    +DL   + L ++      +  ++E  +     +      +Q      ++ + 
Sbjct: 92  QVLLELWNQDLKAQRELAQRQLTIAQE-RRRETCILAQNAQRESIRTQQLVEQGFVSSQR 150

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ--- 304
           +D+A+    +        +   +R      +++ + +   ++  I +P +G I       
Sbjct: 151 FDDAHANARSRQASCEAAISDIKRA----EAQIHVSQAGIDRTIITAPFSGVIGKISGEL 206

Query: 305 --SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               + S     + P + ++      Y+ A +       ++ G  A +       + EK 
Sbjct: 207 GEFTTPSPPGIPTPPTIDLI-DDNCLYVTAPMDEVDAPKIRVGQEARITLDA---MPEKV 262

Query: 363 FKAIIEKIDPIISQQDNNLQT 383
           F   I +I P +++ +   +T
Sbjct: 263 FPGKIRRIAPYVTEIEKQART 283


>gi|228910392|ref|ZP_04074207.1| multidrug resistance protein A [Bacillus thuringiensis IBL 200]
 gi|228849158|gb|EEM93997.1| multidrug resistance protein A [Bacillus thuringiensis IBL 200]
          Length = 225

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 65  KLTDWKAEVGKNYNEN-----DKLGAVTVTAANGEQTVDVTIPQNATVVQSNA-TTNAFV 118

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 119 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LTGKVEQVGL 174

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 175 TTANTFSMLPSSNATANYTKVTQVVPVKISLDHSKSVNIVPGMNVSVRIH 224


>gi|218666032|ref|YP_002426031.1| secretion protein, HlyD family [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|218518245|gb|ACK78831.1| secretion protein, HlyD family [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 331

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 76/242 (31%), Gaps = 13/242 (5%)

Query: 181 LENKSSLLRALLSSHQKDLTM-MKNLFEKN---AVSQNDLNQQERIVYKSTLELR-ENIH 235
              +  + R+ L    + + +   NL          + DL ++ R + +   +L    + 
Sbjct: 89  YRQQVQIDRSNLEVASRQVAVDTSNLAAAQNTVVSDRFDLAEKRRDLARDKEQLPLGAVS 148

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKTILS 294
            Q   L         A L     L  ++RD +   +       +K+ + E T    T+ +
Sbjct: 149 RQAYDLAFTAAAQASAALARDQALVRVARDNISLARANLTAADAKMKLDEVTLSYTTLRA 208

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           P +G ++  +       A     +  +        ++RA V    +  V+ G    V   
Sbjct: 209 PFSG-VLAVREAELGELASPGVAIFTL--DDLDHVWLRAYVNETNLGQVRLGEPVDVTTD 265

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y           I  I          ++T      ++    +   +   EL  G PA+ 
Sbjct: 266 TYPGKVY---HGRIGFIASQAEFTPKTVETHAERVTLVYRIRIDIYNPTHELLPGMPADA 322

Query: 414 LF 415
             
Sbjct: 323 TI 324



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 64/187 (34%), Gaps = 17/187 (9%)

Query: 16  SLKRMTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEIKSP-----FSG 65
            +  + +L ++ + GL+ W     ++  P     +    ++   N+   +S         
Sbjct: 8   GIAAVIILILVAV-GLLFWGPIRQALFGP----SAGPAHVVVSGNIEAHQSVLSFTDVQA 62

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-- 123
            I     + G  +  GTPL   ++      + + + +++     +  + S L    N   
Sbjct: 63  PIVYLPFDEGKYVKAGTPLARVDNRLYRQQVQIDRSNLEVASRQVAVDTSNLAAAQNTVV 122

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D  + A + R+           +   + ++   ++  ++          + + R ++  
Sbjct: 123 SDRFDLAEKRRDLARDKEQLPLGAVSRQAYDLAFTAAAQASAALARDQALVRVARDNISL 182

Query: 184 KSSLLRA 190
             + L A
Sbjct: 183 ARANLTA 189


>gi|41322914|ref|NP_958785.1| plectin isoform 1g [Homo sapiens]
 gi|40849942|gb|AAR95683.1| plectin 10 [Homo sapiens]
          Length = 4551

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 59/199 (29%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1347 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1406

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++    +    +  +++ K+    A   S  +    ++       
Sbjct: 1407 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR------- 1459

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1460 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1518

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1519 VELASRVKAEAEAAREKQR 1537



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2187 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2242

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2243 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2302

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2303 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2362

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2363 EETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2406



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++        +  ++ LR   + E   +     + +  E++    EE++     +  +T 
Sbjct: 1413 VDAQQQKRSIQEELQQLRQSSEAE---IQAKARQAEAAERSRLRIEEEIRVVRLQLEATE 1469

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +            L+    R       +   + ++  LR  +    +     +      
Sbjct: 1470 RQ-----RGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASR 1524

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQ 268
              ++ +  ++++   ++  ELR    E +  LR    E   +  +      +    +L+ 
Sbjct: 1525 VKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQS 1584

Query: 269  NQRTFADEMSKLT 281
             + +FA++ ++L 
Sbjct: 1585 KRASFAEKTAQLE 1597



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2236 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2295

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2296 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2355

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2356 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2415

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2416 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2446



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1644 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1703

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1704 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1760

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1761 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1812

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1813 LAEEAKRQRQLAEED 1827



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 6/148 (4%)

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +     ++            ++  L + R +       + ++      L    ++  + +
Sbjct: 1349 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1408

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                       D  QQ+R + +   +LR++   +        E  + + L     ++ + 
Sbjct: 1409 EEAA------VDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR 1462

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
              LE  +R       +L  L    E+  
Sbjct: 1463 LQLEATERQRGGAEGELQALRARAEEAE 1490



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 54/183 (29%), Gaps = 8/183 (4%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + F++     +E+     E+Q  +   +     + +      +   +         +  L
Sbjct: 1338 IKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKEL 1397

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-------QERIVYKSTLE 229
             +   E       A + + Q+  ++ + L +    S+ ++          ER   +   E
Sbjct: 1398 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1457

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +R    + +   R       E         +E      Q Q        ++    + + Q
Sbjct: 1458 IRVVRLQLEATERQRGGAEGELQA-LRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQ 1516

Query: 290  KTI 292
              +
Sbjct: 1517 AEV 1519



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2324 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2383

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL R+  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2384 AEAERLKL-RVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2441

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2442 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2481



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1555 RLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1614

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1615 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1674

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1675 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1730

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1731 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1763



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1460 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1513

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1514 KRQAEVE--LASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1571

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1572 ETAQRSA--EAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1629

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1630 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1661



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 62/204 (30%), Gaps = 12/204 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E T L    ++++K      +  +   +    +   LE       EQ            +
Sbjct: 1848 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLE-------EQAAQHKADIEERLA 1900

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYL---NRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            ++     S + R   +    +R         L L+       A  +  + +L  +++  E
Sbjct: 1901 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAE 1960

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                S+     +     +   E      E +  ++      +EA  +    L+E+ R   
Sbjct: 1961 DTLRSKEQAELEAARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKA 2020

Query: 268  --QNQRTFADEMSKLTILEKTREQ 289
              +  R   +   + +  +    Q
Sbjct: 2021 KVEEARRLRERAEQESARQLQLAQ 2044


>gi|265985537|ref|ZP_06098272.1| secretion protein HlyD family protein [Brucella sp. 83/13]
 gi|264664129|gb|EEZ34390.1| secretion protein HlyD family protein [Brucella sp. 83/13]
          Length = 353

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 85/280 (30%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  +        + E       A + + +  ++  K   E    
Sbjct: 81  LFEIDSRSYQQKLDQALAALDGKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 140

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++          +  + +       +       D+A    A   +++   +   + 
Sbjct: 141 NTVRVDAL----LPRGVATQSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 196

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 197 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVPAVK-- 253

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 254 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 310

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 311 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 350


>gi|150390830|ref|YP_001320879.1| secretion protein HlyD family protein [Alkaliphilus metalliredigens
           QYMF]
 gi|149950692|gb|ABR49220.1| secretion protein HlyD family protein [Alkaliphilus metalliredigens
           QYMF]
          Length = 359

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 66/422 (15%), Positives = 144/422 (34%), Gaps = 85/422 (20%)

Query: 15  ASLKRMTLLSIIGIIGLITWSI-----LLPIEIS--------VSSSGEILNEDNVVEIKS 61
            ++K+MTL+  I  +G +  +      +  +E          + + G I  E++   I  
Sbjct: 5   KTIKKMTLVISIVFLGFLMVACSKDEEISNVEEVDLSHELKIIEAFGLIKAEESKDIIID 64

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
               ++++  V++G  I   TP+LT +  E    I  KK  +   +         L  L 
Sbjct: 65  F-PAVVQEVLVKDGQHIGFHTPILTLDLSEYQSQITDKKNDLNIAKLEHQRLNKGLQGLT 123

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                     E+RE ++   +     +                                 
Sbjct: 124 ---------LENREPEIDKLINDLDFS--------------------------------- 141

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                  + L     +DL   + L+E  A+SQ  L+Q +R V ++   +  + +E +   
Sbjct: 142 -------KKLYGQALEDLHSKEKLYEAGAISQESLDQFKRSVDEAKKNVDSSEYELQLSA 194

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-----TILSPI 296
              +   ++  L+      ++       +       + L+ L     +       I+S  
Sbjct: 195 SRHDRELEQFRLKQDTESDQVGIQ----RERIRQIENNLSALNDRLNKSYMIGNQIVSEF 250

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
               V++ +++S +     +    I+ + +   + A V  + I+ V +G  A+VR    A
Sbjct: 251 ESAAVHDITYASGHMTDTERKAFSII-NLENLIVEANVVEEFIRDVHQG--ASVRIVPIA 307

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           D R ++++  +  I  +          +    V + I +L        L   +  +V   
Sbjct: 308 D-RTREYEGTVFYISQMAF----PSNGETVIPVRISIDNLDSF-----LLPNYNVDVYIK 357

Query: 417 AK 418
            K
Sbjct: 358 VK 359


>gi|149926510|ref|ZP_01914771.1| Secretion protein HlyD [Limnobacter sp. MED105]
 gi|149824873|gb|EDM84087.1| Secretion protein HlyD [Limnobacter sp. MED105]
          Length = 497

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 67/202 (33%), Gaps = 18/202 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E +  +  L L     E++  L       ++  L+  N  +E    +   ++  A   
Sbjct: 237 RTELLAAQKRLALANTTFEREKKLWEDKISAEQDYLQARNVKQEAEIAVLNARQKLASID 296

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
               I  +   +  I SPI+GT+V     +     ++   +   V      +    + PK
Sbjct: 297 GGAAIGSQ-LTRYEIRSPISGTVVEKNI-ALGQALKEDANIFT-VADLSTVWAEMTIYPK 353

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  VK G  AT++   +           +  +  ++ +Q                  + 
Sbjct: 354 DLNTVKVGQQATIKATAFESESV----GKVAYVGSLVGEQTRTA-----------TARIV 398

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             + N   R G P +V   A+ 
Sbjct: 399 LPNPNSVWRPGLPVKVELVAEE 420



 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 45/142 (31%), Gaps = 11/142 (7%)

Query: 40  IEISVSSSGEILNE-----------DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           IE++ +    + +            DN V +    SGI++   V  G Q+ +G  L    
Sbjct: 170 IELATAGPARVKSSIELIGEIQFNRDNTVRVVPRLSGIVESAPVNAGDQVKKGQVLAVIS 229

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
                D       + K L     T +       +K    +   ++R  +    +   ++ 
Sbjct: 230 SQTLADQRTELLAAQKRLALANTTFEREKKLWEDKISAEQDYLQARNVKQEAEIAVLNAR 289

Query: 149 CSKVFNYGISSVYRSLKMKLTR 170
                  G +++   L     R
Sbjct: 290 QKLASIDGGAAIGSQLTRYEIR 311


>gi|83594813|ref|YP_428565.1| secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
 gi|83577727|gb|ABC24278.1| Secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
          Length = 354

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/312 (11%), Positives = 97/312 (31%), Gaps = 22/312 (7%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  ++ +      A    + Q +           +++   +     +L+MK   + +
Sbjct: 46  RAQVTMISPQSAGYVTAVTVHDFQTVKAGTPLFQIDDRIYAQKLKQAQATLEMKRAALEN 105

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
              +    + +     A ++S    L + ++   +       L  +      S  + R  
Sbjct: 106 SEQSERAAQARIRSSEAEIASAIAALDVARSTARR----TEALLARGVSTQSSADQARST 161

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           + + + ++       D +       L+ I  + +  Q   A+  + + +        +I+
Sbjct: 162 LAQAEALVHKSQAALDVSR----EDLRSIRVNRDSLQADIANAQAAVELATIDLHNTSIV 217

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +PI GT+          Y      L  +VP  +     A     Q+  ++ G   + R  
Sbjct: 218 APIDGTLGEIGVR-LGQYVSAGTQLAALVPARRWVI--ANFKETQLAGIQIGQAVSFRVD 274

Query: 354 HYADIREKKFKAIIEKIDPIISQQDN----NLQTQEYYEVILKIT-DLAFSDNNIE---L 405
                        +E   P    +      +  T  + +V  ++   +A   +  +   L
Sbjct: 275 ALQGT---ALAGHVEAFSPATGSEFTVLKSDNATGNFTKVTQRLPVRIAIDPDQAQAALL 331

Query: 406 RNGFPAEVLFTA 417
             G    V    
Sbjct: 332 APGMSVVVRIDT 343



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 84/298 (28%), Gaps = 12/298 (4%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             +K   PA L     L    ++ L  W  L P   +V ++        V  I    +G 
Sbjct: 2   SKVKHFFPAGLALSIGLIGALLV-LYAW-HLPPFRSAVETTDNAYVRAQVTMISPQSAGY 59

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V +   +  GTPL   +D      +   + +++  R  +  E S       +  +
Sbjct: 60  VTAVTVHDFQTVKAGTPLFQIDDRIYAQKLKQAQATLEMKRAAL--ENSEQSERAAQARI 117

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                E         + +  +  ++       S   S     + +          +    
Sbjct: 118 RSSEAEIASAIAALDVARSTARRTEALLARGVSTQSSADQARSTLAQAEALVHKSQAALD 177

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           + R  L S + +   ++     NA +  +L   +         +   + E    L     
Sbjct: 178 VSREDLRSIRVNRDSLQADIA-NAQAAVELATIDLHNTSIVAPIDGTLGEIGVRLGQYVS 236

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI------LSPIAG 298
              +         + +  + ++ Q         ++      +   +       SP  G
Sbjct: 237 AGTQLAA-LVPARRWVIANFKETQLAGIQIGQAVSFRVDALQGTALAGHVEAFSPATG 293


>gi|254720515|ref|ZP_05182326.1| secretion protein HlyD family protein [Brucella sp. 83/13]
 gi|265985546|ref|ZP_06098281.1| secretion protein HlyD family protein [Brucella sp. 83/13]
 gi|306838117|ref|ZP_07470974.1| HlyD family secretion protein [Brucella sp. NF 2653]
 gi|264664138|gb|EEZ34399.1| secretion protein HlyD family protein [Brucella sp. 83/13]
 gi|306406854|gb|EFM63076.1| HlyD family secretion protein [Brucella sp. NF 2653]
          Length = 314

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 48/396 (12%), Positives = 112/396 (28%), Gaps = 85/396 (21%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M+LL +I  +  +  +            GE +    +   +      ++   V+ G  + 
Sbjct: 1   MSLLCVIPFVSSLFAACGTQSLAVGYVEGEFVQLAPLQVAQ------VRDIAVKRGDHVE 54

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P+ T ED +                  I   ++       +  +       R E++ 
Sbjct: 55  AGEPIATVEDTD----------------ARIAVAQAEAALAQAQAQLANLQVGKRPEEIA 98

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                                    LE      RA     Q+ L
Sbjct: 99  V----------------------------------------LEAAVRSARAQADDAQRTL 118

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++L  +   +Q  L+     +  +   + ++       +  +    +E         
Sbjct: 119 LRTRDLARRGVATQAQLDDAATQLEVAEAAIGQSTANL--AVGKLPARPEEIKA------ 170

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                     +       ++L   +  R Q+ I +P AG I      +  + A  S P++
Sbjct: 171 ---------AENAVKSAEAQLQTAKWQRAQRMIEAPAAGRITDV-VRNPGDIAGPSAPVL 220

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++P      ++  +  ++   V  G         + D      +A +  + P       
Sbjct: 221 TMLP-DGAVKLKVYIPEERFSDVAVGSV----LSVHCDGCAPGLQARVSYVSPDPEFTPP 275

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + + E  + ++ + +    D    L+ G   +V  
Sbjct: 276 VIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 311


>gi|254675115|ref|NP_001157012.1| plectin isoform 12alpha [Mus musculus]
          Length = 4691

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1488 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1547

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1548 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1600

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1601 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1659

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1660 AELALRVKAEAEAAREKQR 1678



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2328 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2381

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2382 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2441

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2442 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2498

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2499 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2547



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 67/200 (33%), Gaps = 12/200 (6%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + + LR  +  E+ A      + D  ++  E+  E       +  +   +       
Sbjct: 1780 QLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1839

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLN 217
               R L     + R        L  +  L+R  L +  +     + L E+     Q++  
Sbjct: 1840 EKQRQLAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEAT 1889

Query: 218  QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               +   +   EL +   E + +L       +E+        + +  +     R  A+E 
Sbjct: 1890 AATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEA 1948

Query: 278  SKLTILEKTREQKTILSPIA 297
            ++L  L +  +++  L+   
Sbjct: 1949 ARLRALAEEAKRQRQLAEED 1968



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2465 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2524

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2525 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2582

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2583 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2642

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2643 EKDSLLQRERFIEQ 2656



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2377 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2436

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2437 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2496

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2497 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2556

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2557 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2587



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1486 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1545

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1546 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1605

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1606 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1665

Query: 291  T 291
             
Sbjct: 1666 V 1666



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1405 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1460

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1461 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1520

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1521 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1580

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1581 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1631



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1696 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1755

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1756 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1815

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1816 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1875

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1876 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1919



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1601 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1654

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1655 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1712

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1713 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1770

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1771 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1802


>gi|254523439|ref|ZP_05135494.1| membrane fusion protein [Stenotrophomonas sp. SKA14]
 gi|219721030|gb|EED39555.1| membrane fusion protein [Stenotrophomonas sp. SKA14]
          Length = 383

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 71/205 (34%), Gaps = 21/205 (10%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E+       +   + +V       R  + + +  +R +   Y  A  +        + 
Sbjct: 94  LVEEG----QRVTAGQPLVRLDPDRARLAVAQSEAQMRKLENNYQRAQ-KLVGQQMVSAA 148

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           D++Q +    +  ++  +        T+++PI+G I      +  N+ Q + P+ +IV  
Sbjct: 149 DVDQLRFDLENVRAQYRLATLELSYTTVVAPISGVIASRSIKT-GNFVQINTPIFRIV-D 206

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +        V  +++  ++ G   T+          + F   +++I P++       +  
Sbjct: 207 NSRLEATLNVPERELATLRAGQPVTLVADALP---GQSFTGTVDRIAPVVDSGSGTFRVV 263

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
                       AF      L+ G 
Sbjct: 264 S-----------AFDGAAHALQPGM 277



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 51/159 (32%), Gaps = 2/159 (1%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  +        + +  SG+     VE G ++  G PL+  +       +   +  ++
Sbjct: 69  TGTAALEPRAESQVV-AKTSGVALAVLVEEGQRVTAGQPLVRLDPDRARLAVAQSEAQMR 127

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  +    +  +         +++     E     +               IS V  S 
Sbjct: 128 KLENNYQRAQKLVGQQMVSAADVDQLRFDLENVRAQYRLATLELSYTTVVAPISGVIASR 187

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +K      I      + +  S L A L+  +++L  ++
Sbjct: 188 SIKTGNFVQINTPIFRIVDN-SRLEATLNVPERELATLR 225


>gi|296272346|ref|YP_003654977.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
 gi|296096520|gb|ADG92470.1| secretion protein HlyD family protein [Arcobacter nitrofigilis DSM
           7299]
          Length = 270

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 9/173 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           + L  +  + I+ II +  ++  L +          +  +N   I S ++G I+KF +  
Sbjct: 4   SYLSHILKVFILLIISMNLYAEPLELSS-------FIVSNNQKTISSKYNGYIEKFYINE 56

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  LL  +  E + L     +SI+  + + +  KS L      +D  ++ FE +
Sbjct: 57  GDYVKKGKLLLKIDSKEMSTLKSQTILSIEQAKLNFNIIKSDLGKATIDFDRYKRLFEKQ 116

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                DF               +    +S+K    +++ I  N   L  ++S 
Sbjct: 117 LISKSDFEN--FQLKKSNLEKNLQIAKKSIKQSEDKLQEINKNLKYLNIRASS 167



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 50/157 (31%), Gaps = 17/157 (10%)

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
              + ++L+  +++      KL  + K  +   I +   G I+          A    PL
Sbjct: 130 KSNLEKNLQIAKKSIKQSEDKLQEINKNLKYLNIRASSDGLIIKKNIN-EGELATAGTPL 188

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + I        +   V    +   ++     +        ++ K  AI+  +D       
Sbjct: 189 LTIS-DVDNLNLYLDVAESDLSKFREKENLDIYIESLNINQKAKVVAILPSVDS------ 241

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               T  +    +K++   F   +  +  G  A+V  
Sbjct: 242 ---GTNSF---RVKLS---FKRTDNRVLPGMYAKVRV 269


>gi|291562436|emb|CBL41252.1| RND family efflux transporter, MFP subunit [butyrate-producing
           bacterium SS3/4]
          Length = 440

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 75/233 (32%), Gaps = 41/233 (17%)

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L++ Q +    K LF+  +V + DL   E  ++ +  E      +  + +       D  
Sbjct: 162 LNTAQANYDRTKALFDGGSVPKVDLETAENGLHDAERECDSYTIKNGSAVAD-----DSY 216

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            L+      +  + +EQ                   +   + +PI GT+V  +  +    
Sbjct: 217 RLQIEKAKFDYEKAVEQ------------------LDNTILKAPIDGTVV--RVNTK--V 254

Query: 312 AQQSQPL-----MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
            + +  +     + ++ +     +  KV+   I  V  G  A +       +  +     
Sbjct: 255 GRFADKMENDAPLFVIENLDNLELEIKVSEYTIGKVAVGQEAEI--SA-DILNGETVHGE 311

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  I P   ++             +  T +  +D + +L  G  A      + 
Sbjct: 312 VISISPTGEEKGGGSSE------RVIPTKIRVTDQDTKLIAGITARASIVLEE 358



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +G I   D+V  + +  + I+ +  V+ G ++ +G PL   +D +     D+ K    
Sbjct: 80  TVTGPISGTDSVDVVSNLHAEIL-EIPVKEGDKVTKGQPLAVLDDSDVKKEADIAKNDYD 138


>gi|254675244|ref|NP_958791.2| plectin isoform 1 [Mus musculus]
          Length = 4686

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1483 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1542

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1543 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1595

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1596 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1654

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1655 AELALRVKAEAEAAREKQR 1673



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2323 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2376

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2377 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2436

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2437 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2493

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2494 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2542



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 67/200 (33%), Gaps = 12/200 (6%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + + LR  +  E+ A      + D  ++  E+  E       +  +   +       
Sbjct: 1775 QLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1834

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLN 217
               R L     + R        L  +  L+R  L +  +     + L E+     Q++  
Sbjct: 1835 EKQRQLAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEAT 1884

Query: 218  QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               +   +   EL +   E + +L       +E+        + +  +     R  A+E 
Sbjct: 1885 AATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEA 1943

Query: 278  SKLTILEKTREQKTILSPIA 297
            ++L  L +  +++  L+   
Sbjct: 1944 ARLRALAEEAKRQRQLAEED 1963



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2460 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2519

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2520 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2577

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2578 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2637

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2638 EKDSLLQRERFIEQ 2651



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2372 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2431

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2432 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2491

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2492 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2551

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2552 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2582



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1481 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1540

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1541 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1600

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1601 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1660

Query: 291  T 291
             
Sbjct: 1661 V 1661



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1400 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1455

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1456 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1515

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1516 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1575

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1576 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1626



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1691 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1750

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1751 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1810

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1811 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1870

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1871 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1914



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1596 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1649

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1650 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1707

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1708 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1765

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1766 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1797


>gi|122065897|sp|Q9QXS1|PLEC_MOUSE RecName: Full=Plectin; Short=PCN; Short=PLTN; AltName:
            Full=Plectin-1; AltName: Full=Plectin-6
          Length = 4691

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1488 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1547

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1548 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1600

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1601 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1659

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1660 AELALRVKAEAEAAREKQR 1678



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2328 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2381

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2382 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2441

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2442 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2498

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2499 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEED 2547



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 67/200 (33%), Gaps = 12/200 (6%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + + LR  +  E+ A      + D  ++  E+  E       +  +   +       
Sbjct: 1780 QLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1839

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLN 217
               R L     + R        L  +  L+R  L +  +     + L E+     Q++  
Sbjct: 1840 EKQRQLAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEAT 1889

Query: 218  QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               +   +   EL +   E + +L       +E+        + +  +     R  A+E 
Sbjct: 1890 AATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEA 1948

Query: 278  SKLTILEKTREQKTILSPIA 297
            ++L  L +  +++  L+   
Sbjct: 1949 ARLRALAEEAKRQRQLAEED 1968



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2465 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2524

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2525 AEAERLKL-RMVEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2582

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2583 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2642

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2643 EKDSLLQRERFIEQ 2656



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2377 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2436

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2437 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2496

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2497 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEEDAQRFRKQAE 2556

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2557 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2587



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1486 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1545

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1546 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1605

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1606 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1665

Query: 291  T 291
             
Sbjct: 1666 V 1666



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1405 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1460

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1461 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1520

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1521 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1580

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1581 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1631



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1696 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1755

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1756 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1815

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1816 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1875

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1876 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1919



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1601 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1654

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1655 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1712

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1713 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1770

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1771 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1802


>gi|117622977|ref|YP_851890.1| hypothetical protein APECO1_1295 [Escherichia coli APEC O1]
 gi|218557700|ref|YP_002390613.1| hypothetical protein ECS88_0813 [Escherichia coli S88]
 gi|218688581|ref|YP_002396793.1| hypothetical protein ECED1_0760 [Escherichia coli ED1a]
 gi|237707246|ref|ZP_04537727.1| membrane protein ybhG [Escherichia sp. 3_2_53FAA]
 gi|166227564|sp|A1A936|YBHG_ECOK1 RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710499|sp|B7MGQ3|YBHG_ECO45 RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|254807374|sp|B7MQP9|YBHG_ECO81 RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|115512101|gb|ABJ00176.1| conserved hypothetical membrane protein ybhG [Escherichia coli APEC
           O1]
 gi|218364469|emb|CAR02151.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor; UPF0194 family [Escherichia coli S88]
 gi|218426145|emb|CAR06965.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor; UPF0194 family [Escherichia coli ED1a]
 gi|222032526|emb|CAP75265.1| UPF0194 membrane protein ybhG [Escherichia coli LF82]
 gi|226898456|gb|EEH84715.1| membrane protein ybhG [Escherichia sp. 3_2_53FAA]
 gi|312945313|gb|ADR26140.1| hypothetical protein NRG857_03550 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|323953542|gb|EGB49408.1| HlyD family protein secretion protein [Escherichia coli H252]
 gi|323958084|gb|EGB53793.1| HlyD family protein secretion protein [Escherichia coli H263]
          Length = 332

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 127 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 185

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 186 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 243

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +      K +   I  + P       + +  +L+T  
Sbjct: 244 RAYVDERNLDQAQPGRKVLL---YTDGRPNKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 300

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 301 VYRLRIVVTDADDA-----LRQGMPVTV 323



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 52  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 105 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 160 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 203

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 204 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 263

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 264 YTDGRPNKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 320

Query: 348 ATVRF 352
            TV+F
Sbjct: 321 VTVQF 325


>gi|86156654|ref|YP_463439.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85773165|gb|ABC80002.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 380

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 67/205 (32%), Gaps = 9/205 (4%)

Query: 182 ENKSSLLRALL--SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             +++ LRA +  +  +  +   + +     +++ D +  +  V  +   +    +  + 
Sbjct: 71  ARRTATLRAEVGGAVAEVRVEAGERVKAGQLLARIDASALQDAVRAARSAVTSAQNALRV 130

Query: 240 MLRHINELYDEAN--LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                   +  A          +     LE  +    D  ++L   E+   +  + +P A
Sbjct: 131 AESSARRAHTLAREGAMAEQDAERAEAQLEAARAQVEDAKARLAAAEQQAGKTAVRAPFA 190

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +V  ++ SS +       L  ++           V    +  +  G         +  
Sbjct: 191 G-VVSERNVSSGDVVSSGAALYTVI-DPSRLQFEGSVPAASVGALAPGAPVDFAVTGFGG 248

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQ 382
            R   F   IE+++P +      ++
Sbjct: 249 RR---FDGHIERVNPAVDPSTGQVR 270



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 36/99 (36%), Gaps = 3/99 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFL 120
            G + + +VE G ++  G  L   +     D +   + ++ + +  +   ++       L
Sbjct: 82  GGAVAEVRVEAGERVKAGQLLARIDASALQDAVRAARSAVTSAQNALRVAESSARRAHTL 141

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +  + E+  E  E QL     +     +++      +
Sbjct: 142 AREGAMAEQDAERAEAQLEAARAQVEDAKARLAAAEQQA 180


>gi|40849918|gb|AAR95671.1| plectin 6 [Mus musculus]
          Length = 4686

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1483 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1542

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1543 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1595

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1596 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1654

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1655 AELALRVKAEAEAAREKQR 1673



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2323 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2376

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2377 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2436

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2437 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2493

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2494 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEED 2542



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 67/200 (33%), Gaps = 12/200 (6%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + + LR  +  E+ A      + D  ++  E+  E       +  +   +       
Sbjct: 1775 QLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1834

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLN 217
               R L     + R        L  +  L+R  L +  +     + L E+     Q++  
Sbjct: 1835 EKQRQLAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEAT 1884

Query: 218  QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               +   +   EL +   E + +L       +E+        + +  +     R  A+E 
Sbjct: 1885 AATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEA 1943

Query: 278  SKLTILEKTREQKTILSPIA 297
            ++L  L +  +++  L+   
Sbjct: 1944 ARLRALAEEAKRQRQLAEED 1963



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2460 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2519

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2520 AEAERLKL-RMVEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2577

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2578 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2637

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2638 EKDSLLQRERFIEQ 2651



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2372 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2431

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2432 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2491

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2492 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEEDAQRFRKQAE 2551

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2552 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2582



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1481 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1540

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1541 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1600

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1601 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1660

Query: 291  T 291
             
Sbjct: 1661 V 1661



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1400 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1455

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1456 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1515

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1516 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1575

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1576 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1626



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1691 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1750

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1751 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1810

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1811 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1870

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1871 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1914



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1596 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1649

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1650 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1707

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1708 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1765

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1766 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1797


>gi|298293337|ref|YP_003695276.1| secretion protein HlyD [Starkeya novella DSM 506]
 gi|296929848|gb|ADH90657.1| secretion protein HlyD family protein [Starkeya novella DSM 506]
          Length = 290

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 78/232 (33%), Gaps = 24/232 (10%)

Query: 204 NLFEKNAVSQNDLN---QQER-------IVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           N+ +   VS+ D+     QER          +  L+++   + Q    R +     +   
Sbjct: 61  NVADNEKVSKGDVLFVIDQERFQVAVQQAQAQVELKVQALKYAQDTARRDVTLGQQDNEA 120

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                 +  +    + Q       + L   +    +  + +P+ G +     F   NYA 
Sbjct: 121 ISIQSTERATTTAGEAQAELDAARAALATAQINLTRSQVRTPVDGYVTNLNIF-VGNYAT 179

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-- 371
             + ++ +V  S   Y+ A     ++  ++ G  A +       + +   + +   I   
Sbjct: 180 AGESVLALV-DSDSFYVYAYFMETKLPAIRDGDPARIELMAGNVVLDGVVEGMSRAIANT 238

Query: 372 -------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                    +  + + ++  +   V ++I  L      +EL  G  A V+  
Sbjct: 239 TDSRGLLADVPAEFDWIRLAQRIPVRIRIGKL---PPGVELAAGMSATVVVQ 287


>gi|240146264|ref|ZP_04744865.1| efflux transporter, RND family, MFP subunit [Roseburia intestinalis
           L1-82]
 gi|257201624|gb|EEU99908.1| efflux transporter, RND family, MFP subunit [Roseburia intestinalis
           L1-82]
          Length = 482

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 59/331 (17%), Positives = 96/331 (29%), Gaps = 58/331 (17%)

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G Q+  G  LL   D            SI+  R  +            K  V E + +  
Sbjct: 111 GQQVKAGDALLKLTD-----------ESIEKYRKKL------------KEAVTEASADYN 147

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
              L     K  +  S   +    SV                   +L++     +  +  
Sbjct: 148 SAALSSAKEKVSANYSYNLSVAEGSV---------AQEEYEATISELQDAVDEAQEAVDE 198

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q  LT  + + +        L  ++    K   +L+              + Y EA L 
Sbjct: 199 SQALLTYYQEMIDSGMDLSESLADEQGNYDKLYNKLKAAKSAYTTKSVEAEKKYKEAMLS 258

Query: 255 FANYLKEISRDLE-------QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
           + N   + S D+          Q T  D    L+  E      TI S   GTI+      
Sbjct: 259 YENADSQYSADVAGVDVSVDTAQDTLTDAKEALSEFEIFVGDGTIYSDYDGTIMSVGY-- 316

Query: 308 SSNYAQQSQPL---MKIV--PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                +    L     IV    +    +   V+ + I  +  G    +    Y D     
Sbjct: 317 -----EAGDDLSTSTSIVTFADTDAVTMTVSVSEEDISEIAIGDEVMIELNAYEDQT--- 368

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           F   +E ID  +S   + +     Y V +KI
Sbjct: 369 FSGEVESIDTSVSSGSSTIS----YNVTVKI 395


>gi|75761069|ref|ZP_00741068.1| Multidrug resistance protein A [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491453|gb|EAO54670.1| Multidrug resistance protein A [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 225

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 60/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 65  KLTDWKAEVGKNYNEN-----DKLGVVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 118

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    +  V+KG    V    Y D         +E++  
Sbjct: 119 GAGSPIAYAF-DMNNLWVTANIEETDVDDVQKGQDVDVYVDAYPDTT---LTGKVEQVGL 174

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 175 TTANTFSMLPSSNSTANYTKVTQVVPVKISLDHSKSVNIVPGMNVSVRIH 224


>gi|331656812|ref|ZP_08357774.1| putative membrane protein [Escherichia coli TA206]
 gi|331055060|gb|EGI27069.1| putative membrane protein [Escherichia coli TA206]
          Length = 331

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLVAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +      K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPNKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLVAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPNKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|295676616|ref|YP_003605140.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1002]
 gi|295436459|gb|ADG15629.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1002]
          Length = 432

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 85/293 (29%), Gaps = 28/293 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + Q++       +         ++     L   + R+  +Y+N        +   
Sbjct: 94  AVNTDDTQIVKQGDAVVTLDPADAKLALADAEAQLGQTVRRVSGLYVNNDFYAAHVAQRE 153

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A LS  + DL   + + +  AVS                   E+I   ++ +       D
Sbjct: 154 ADLSRARDDLHRREAVADTGAVS------------------AEDIAHARDAVSVAQAALD 195

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A  +         R   +         +K+        + T+ +P+ G +   +     
Sbjct: 196 AARQQGEANHALTDRTTVEQHPDVQAAAAKVRTAWLAYARDTLPAPVTGYVAQRRV-QVG 254

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD--IREKKFKA-I 366
                  PLM IVP     ++ A     Q++H++ G   T+    Y        + +   
Sbjct: 255 QRVAPGTPLMAIVPLDG-VWVDANFKEVQLKHMRIGQRVTLTSDVYGRGARYHGRIEGFS 313

Query: 367 IEKIDPIISQQDNNLQTQ-----EYYEVILKITDLAFSDNNIELRNGFPAEVL 414
                   +    N         +   V + +     + + + +      +  
Sbjct: 314 AGTGSAFATLPAQNATGNWIKIVQRLPVRIALDPAELAAHPLRIGLSMAVDAD 366


>gi|256086967|ref|XP_002579653.1| myosin heavy chain [Schistosoma mansoni]
 gi|238665121|emb|CAZ35892.1| myosin heavy chain, putative [Schistosoma mansoni]
          Length = 1937

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 78/221 (35%), Gaps = 6/221 (2%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  E           + +   L+  ++     ++  N     LE+   +    L ++  K
Sbjct: 1377 LESEAESAKSKCGQLEKTKARLQGELEDLMVDVERANGLASQLERKQNNFNRTLAEWQKK 1436

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            Y  + +++ N    +  +S     T +  +     ++  +   LR    +   ++  +  
Sbjct: 1437 YADSQAELENAQRDARGQS-----TEIFRLKAQLEEVHEQMEGLRRENKNLSDEIHDLTE 1491

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
               +   S +++++  R +     EL+  + E ++ L         A LE +   +EI R
Sbjct: 1492 QLGEGGRSVHEIDKNRRRLEMEKEELQAALEEAESALEQEEAKVQRAQLEMSQIRQEIDR 1551

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
             L + +  F +   K        +Q ++ +   G     + 
Sbjct: 1552 RLAEKEEEF-EATRKNHQRAMESQQASLEAEAKGKAEAMRV 1591



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 74/219 (33%), Gaps = 22/219 (10%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL---------LDFL 142
                   +   I  L+  ++     ++ L  +   L        EQL         +D  
Sbjct: 1447 AQRDARGQSTEIFRLKAQLEEVHEQMEGLRRENKNLSDEIHDLTEQLGEGGRSVHEIDKN 1506

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +      +     +     +L+ +  +++   L    +  +   +   L+  +++    
Sbjct: 1507 RRRLEMEKEELQAALEEAESALEQEEAKVQRAQLEMSQIRQE---IDRRLAEKEEEFEAT 1563

Query: 203  KNLFEKNAVSQNDLNQQER----IVYKSTLELRENIHEQKNMLRHINELYDEANL---EF 255
            +   ++   SQ    + E        +   +L ++I+E +  L   N    E      +F
Sbjct: 1564 RKNHQRAMESQQASLEAEAKGKAEAMRVKKKLEQDINELEVSLDGANRARAEQEKNVKKF 1623

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               ++E+   LE +QR   D   +    E+   + T+L+
Sbjct: 1624 QQQVRELQSQLEDDQRQRDDLREQFQAAER---RATVLA 1659



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 66/202 (32%), Gaps = 16/202 (7%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            +  + +++     ++ E++ +     +   + +  + R  +  +          +     
Sbjct: 1515 EELQAALEEAESALEQEEAKVQRAQLEMSQIRQEIDRRLAEKEEEFEATRKNHQRAMESQ 1574

Query: 157  ISSVYRSLKMKLTRMR----------SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             +S+    K K   MR           + ++        +     +   Q+ +  +++  
Sbjct: 1575 QASLEAEAKGKAEAMRVKKKLEQDINELEVSLDGANRARAEQEKNVKKFQQQVRELQSQL 1634

Query: 207  EKNAVSQNDLNQQ----ERIVYKSTLELRENI--HEQKNMLRHINELYDEANLEFANYLK 260
            E +   ++DL +Q    ER       EL E     +Q    R I E       + A  + 
Sbjct: 1635 EDDQRQRDDLREQFQAAERRATVLAGELDELRIALDQAERSRKIAEAERAEASDRATEMS 1694

Query: 261  EISRDLEQNQRTFADEMSKLTI 282
              +  L   +R    +++ +  
Sbjct: 1695 TQTASLAAQKRKLEADLAAMQA 1716



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 78/212 (36%), Gaps = 10/212 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ED +       ++      R  +      LD L    D  E++ +  E +  +   + 
Sbjct: 1633 QLEDDQRQRDDLREQFQAAERRATVLA--GELDELRIALDQAERSRKIAEAERAEASDRA 1690

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                ++     +++  R L+  L  M      + DLE  ++  +      +K +     +
Sbjct: 1691 TEMSTQT--ASLAAQKRKLEADLAAM------QADLEEAANEAKQADERAKKAMADSARV 1742

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            FE+    Q      E+   +  ++++E +   ++      +   +A  +    ++E+  +
Sbjct: 1743 FEEIRQEQEHTQHVEKARKQLEIQVKELMARLEDSESGAMKNGRKAMGKLEQRVRELETE 1802

Query: 266  LEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            LE  QR   +    L  +++  ++ ++ +   
Sbjct: 1803 LEAEQRRHGETQKNLRKVDRRMKEISLQAEED 1834



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 66/193 (34%), Gaps = 8/193 (4%)

Query: 100  KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            + ++K L   +      LD      +          +++ +   +     S++    ++ 
Sbjct: 1223 EKTVKALESQLQEVSVKLDEATRNLNEQASTKARSSQEVSELQRQLEEAESQL--SQLNK 1280

Query: 160  VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            + + L  +L   R    +   ++ K   L   + +   DL  ++   E+   ++ DL   
Sbjct: 1281 IKQQLSAQLEEARHSLEDESRMKAK---LNGEVRNLTSDLDSLRETLEEEQSAKGDL--- 1334

Query: 220  ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            +R + K   EL++            +E  +E   +    ++E+  + E  +         
Sbjct: 1335 QRQLQKLQGELQQLRSRGGGGGDVRSEEVEELKRKMNAKIQELESEAESAKSKCGQLEKT 1394

Query: 280  LTILEKTREQKTI 292
               L+   E   +
Sbjct: 1395 KARLQGELEDLMV 1407



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 26/219 (11%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             D+      +L K+        +  E++       + D +         +L D L + + 
Sbjct: 1138 SDLTKKREAELMKLKRDLEDTRLQNEQAIATMRKKQSDAI--------NELADQLDQANK 1189

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLF 206
              +K      S     L     ++ SI   +L+ E     L + L      L    +NL 
Sbjct: 1190 AKAKAEKER-SQFKAELDDAHNQVDSIMKAKLNSEKTVKALESQLQEVSVKLDEATRNLN 1248

Query: 207  EK---NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE--------- 254
            E+    A S  ++++ +R + ++  +L +    ++ +   + E       E         
Sbjct: 1249 EQASTKARSSQEVSELQRQLEEAESQLSQLNKIKQQLSAQLEEARHSLEDESRMKAKLNG 1308

Query: 255  ----FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                  + L  +   LE+ Q    D   +L  L+   +Q
Sbjct: 1309 EVRNLTSDLDSLRETLEEEQSAKGDLQRQLQKLQGELQQ 1347



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 70/203 (34%), Gaps = 10/203 (4%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +  I+  K  +++L   +   +      +N+   L+     +     D +    +   K 
Sbjct: 921  SAEIEELKKDVEDLESSLQKAEQEKQTKDNQIRTLQSEMAQQ-----DEMIGKLNKDKKN 975

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM----KNLFEK 208
                      +L+ +  ++  +   +  LE+    +   L+  QK    +    + L   
Sbjct: 976  LEEQNKRTQEALQAEEDKVNHLNKLKAKLESTLDEMEENLAREQKIRGDVEKSKRKLEGD 1035

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
               +Q  ++  ER+      +LR    E   +     E       +    +KE+   +++
Sbjct: 1036 LKATQETVDDLERVKRDLEEQLRRKEAEIGGLSGKF-EDEQGLVAQLQRKIKELQTRIQE 1094

Query: 269  NQRTFADEMSKLTILEKTREQKT 291
             +     E +  +  EK+R+Q  
Sbjct: 1095 LEEDLEAERAARSKAEKSRQQLE 1117



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 64/199 (32%), Gaps = 19/199 (9%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             +   K  +  +  E+  ++ LN     LE   +  EE L                    
Sbjct: 976  LEEQNKRTQEALQAEEDKVNHLNKLKAKLESTLDEMEENLAREQKIR------------G 1023

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE--KNAVSQNDL 216
             V +S +     +++      DLE     L   L   + ++  +   FE  +  V+Q  L
Sbjct: 1024 DVEKSKRKLEGDLKATQETVDDLERVKRDLEEQLRRKEAEIGGLSGKFEDEQGLVAQ--L 1081

Query: 217  NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD--LEQNQRTFA 274
             ++ + +     EL E++  ++       +   +   E    +  +         Q    
Sbjct: 1082 QRKIKELQTRIQELEEDLEAERAARSKAEKSRQQLESELEEVVDRLEEQDGATAAQSDLT 1141

Query: 275  DEMS-KLTILEKTREQKTI 292
             +   +L  L++  E   +
Sbjct: 1142 KKREAELMKLKRDLEDTRL 1160


>gi|261339081|ref|ZP_05966939.1| hypothetical protein ENTCAN_05293 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318916|gb|EFC57854.1| HlyD family secretion protein [Enterobacter cancerogenus ATCC
           35316]
          Length = 354

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 55/166 (33%), Gaps = 11/166 (6%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL  +  I    W  L P    +     +      V      SG +    V N SQ+ +G
Sbjct: 19  LLMFVYFIVADIWIPLTPDSTVMR---VVTPVSARV------SGYVAAVHVHNNSQVKKG 69

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L   +D    + ++  +++++     +  E+        +  +      +R +++   
Sbjct: 70  DLLFELDDTPFRNKVEAAQIALEQ--ARLSNEQLDAQIAAAQASLKTAVLTARNDKVTFD 127

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
             +  S    V    +  V  + +     + S+  N  +L  +   
Sbjct: 128 RYQKLSALQNVSQSDLDKVRTAWQSSEQSVSSLQANIRNLRIQRGE 173


>gi|146309805|ref|YP_001174879.1| secretion protein HlyD family protein [Enterobacter sp. 638]
 gi|145316681|gb|ABP58828.1| secretion protein HlyD family protein [Enterobacter sp. 638]
          Length = 378

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 89/318 (27%), Gaps = 84/318 (26%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +G++ +   +N   I +G  L   + +                +  +D  K+ L 
Sbjct: 66  ITPQVTGVVSEVTDKNNQLIKKGEVLFKLDPVR--------------YQARVDRLKADLV 111

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
              +  DVL+      E        +                                  
Sbjct: 112 TATHSIDVLKAQLSEAEANTTRVSAERD-------------------------------- 139

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
                       L    Q+ L   +   + N  S++D++   +        ++ +I +Q 
Sbjct: 140 -----------RLYKDFQRYLKGSQ--AKVNPFSESDIDNARQNYLAQDAMVKASIADQA 186

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +   ++ +                      Q       ++LT      EQ  + +P  G
Sbjct: 187 QIKSQLDSMV------------------NGEQSQIVSLRAQLTEANYNLEQTVVRAPSDG 228

Query: 299 TIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            +          YA     +P+M  +P  K   + A+     +  +K G  A V F    
Sbjct: 229 YVTQVLIR-PGTYAAALPLRPVMVFIPEQKRLIV-AQFRQNSLLRLKPGDEAEVVFNALP 286

Query: 357 DIREKKFKAIIEKIDPII 374
               + F   +  I P++
Sbjct: 287 ---GQVFSGKLTSILPVV 301


>gi|238784484|ref|ZP_04628493.1| Multidrug resistance protein A [Yersinia bercovieri ATCC 43970]
 gi|238714653|gb|EEQ06656.1| Multidrug resistance protein A [Yersinia bercovieri ATCC 43970]
          Length = 390

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 92/274 (33%), Gaps = 34/274 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +   +L +  LS  Q DL+    L   NA+ +
Sbjct: 98  EQAYEQAKTALANSVRQTHQLIINSKQYQANIALKKTELSKAQNDLSRRVVLGSVNAIGR 157

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +   L                  D A  ++      +     + Q   
Sbjct: 158 EELQHARDAVDAAQASL------------------DVAIQQYNANQALVLNTPLEKQPAI 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +KL       ++  ++SPI G +   +S           PLM ++P +   +I A 
Sbjct: 200 EQSAAKLRDAWLALQRTKVVSPITGYVSR-RSVQVGAKIANGAPLMAVIPAN-QMWIDAN 257

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G +ATV    Y D     ++  +  +D          P  +   N ++ 
Sbjct: 258 FKETQLANMRIGQSATVVTDFYGDDV--VYQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 315

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +   V + + +   +++ + +  G    V    
Sbjct: 316 VQRLPVRISLDEQQLAEHPLRI--GLSTTVRVDT 347


>gi|116625539|ref|YP_827695.1| RND family efflux transporter MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116228701|gb|ABJ87410.1| efflux transporter, RND family, MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 435

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 73/227 (32%), Gaps = 32/227 (14%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE-----FANYLKEISRDLEQNQRT 272
             ER   K      E +   +     I     E +L+        +      DL +  + 
Sbjct: 154 DLER--AKLDASKAEVLSAIEGEKNRIQVGVSEGSLQTVKASINAHQVGHEADLSRLNQR 211

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQ------------SQPLM 319
               +  L   +       + +PI G +    +F S  ++ Q                + 
Sbjct: 212 KDKAVRDLNTAQGYLGMMQLKAPIDGIVNVLPNFRSQGSFGQATPPFKEGDNAWTGAEIA 271

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +I P     ++  K+       ++ G +  +R     D    +F A ++ I PI +    
Sbjct: 272 EI-PDLSQMFVDLKLEEVDRGKLRLGQSVRIRVDAIPDR---EFTATLDWISPIAALVFK 327

Query: 380 NLQT-QEYYEVILKITDLAFSDNNIELRNGFPA--EVLFTAKNTTLA 423
              T ++ +     IT L     +  LR G  A  E++   +  TL 
Sbjct: 328 GGSTAEKTFPARATITKL-----DDRLRPGMSASTEIIIEREANTLL 369



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 81/226 (35%), Gaps = 34/226 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSIL---------LPIEISVSSSGEILNEDN-- 55
           + L +++P  +K +T   ++G+ G   ++           +P+         I       
Sbjct: 10  QRLGKSNPRRVKIITWTLMLGLFGGGAYAAYRYTGTTEVEVPVSRVRRGEFIISVRTRGD 69

Query: 56  --------VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-- 105
                   +   + P   I++      G  + +G  ++ F+  +    +  +  +++   
Sbjct: 70  IKSARSLILKAPQVPGLRIVR--LATAGRPVKKGDVVVEFDGSQQDQNVISRTTTVRAAD 127

Query: 106 -------LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL-GKYHSTCSKVFNYGI 157
                      ID E  +++ ++++YD+     ++ + ++L  + G+ +     V    +
Sbjct: 128 GDIVQTKATQKIDDEADSMNKMSSEYDLERAKLDASKAEVLSAIEGEKNRIQVGVSEGSL 187

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +V  S+        +       L  +       L++ Q  L MM+
Sbjct: 188 QTVKASINAHQVGHEADLSR---LNQRKDKAVRDLNTAQGYLGMMQ 230


>gi|107026001|ref|YP_623512.1| multidrug resistance protein MdtN [Burkholderia cenocepacia AU
           1054]
 gi|116692814|ref|YP_838347.1| multidrug resistance protein MdtN [Burkholderia cenocepacia HI2424]
 gi|170737935|ref|YP_001779195.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
 gi|105895375|gb|ABF78539.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116650814|gb|ABK11454.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           HI2424]
 gi|169820123|gb|ACA94705.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
          Length = 349

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/364 (11%), Positives = 104/364 (28%), Gaps = 81/364 (22%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P+   R+  L+I+ + G+   +       +  S+ +   + +VV + SP  G I +  V 
Sbjct: 9   PSVKGRVIALAIVAL-GIAALAYAYHRTTAYPSTDDASIDADVVHVASPVGGRIVQLAVH 67

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++ +G  L   + +         ++++   +  ++  ++                  
Sbjct: 68  ENQRVAKGDLLYVIDPVPY-------RLTVAQAQADLELARA------------------ 102

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                                        SL  +   +     N      +         
Sbjct: 103 -----------------------------SLDTRRRSLIGERSNASVAAEQVKRATQNYD 133

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              +D+  +  L  +  VS    +Q +     +++ L +   +Q+   + I         
Sbjct: 134 LATRDVNRLAPLAAQGYVSAQQFDQAKVRQRDASVSLAQAQEQQRASAQTIG-------- 185

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                      D      T     + L   +   +   + +P  G +             
Sbjct: 186 -----------DDADAIATLHAREAALARAQHALDDTVVRAPHDGLVTGLSVL-PGETLA 233

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDP 372
            +Q +  ++  S+   +        +  +  G  ATV    Y+ I R +     +  I  
Sbjct: 234 PNQSIFTLIDASEWFAV-GNFRETSLNRIAVGDCATV----YSMIDRSRPLTGKVVGIGA 288

Query: 373 IISQ 376
            I+ 
Sbjct: 289 GIAD 292


>gi|271498707|ref|YP_003331732.1| secretion protein HlyD family protein [Dickeya dadantii Ech586]
 gi|270342262|gb|ACZ75027.1| secretion protein HlyD family protein [Dickeya dadantii Ech586]
          Length = 420

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 104/337 (30%), Gaps = 40/337 (11%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +  E     + + L        R  +       + +  +  V E     R++ LL     
Sbjct: 44  VRIEPQRLENQLGLVGQIQAATRITLAA---PFEGVVREVRVREGQSVVRDQILLSLDPA 100

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 +     +  +    +++  R               +  R  LS+ +  L   + 
Sbjct: 101 LLEIQMRQAQADV--LKAQREVQQYRQWEKGAEVSRARRAVANARQELSNTEASLRDTQT 158

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           LF +  V++ +++   + V     EL     E   +L        +              
Sbjct: 159 LFARGIVARMEVDALTQQVRTQRQELLAAQEELATVLARGQGEERKI------------- 205

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS--------FSSSNYAQQSQ 316
                +    +  ++   LE     + I +P+AG IV   +                Q  
Sbjct: 206 ----AEMELLNAQARYQALEVMYAHRDITAPVAGFIVRPTTPENSRPVMVQPGVQVAQGT 261

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           PL+ ++       + A+V    +  +++G    +    +A         ++  I  I  Q
Sbjct: 262 PLLTLI-GQDRFQVLARVEETDLHLLQEGMPVQITGDGFAGQE------LVGHIASIAVQ 314

Query: 377 --QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
             + +       Y++++ + D A SD    +R G  A
Sbjct: 315 GSETDVQSAGARYDIVVSV-DSALSDFTPPIRLGMSA 350



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/175 (10%), Positives = 65/175 (37%), Gaps = 4/175 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +     + + +PF G++++ +V  G  +++   LL+ +       I +++     L+   
Sbjct: 61  IQAATRITLAAPFEGVVREVRVREGQSVVRDQILLSLDP--ALLEIQMRQAQADVLKAQR 118

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           + ++        +     +A  +  ++L +       T +      ++ +   +     +
Sbjct: 119 EVQQYRQWEKGAEVSRARRAVANARQELSNTEASLRDTQTLFARGIVARM--EVDALTQQ 176

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           +R+     L  + + + + A     ++ +  M+ L  +      ++    R +  
Sbjct: 177 VRTQRQELLAAQEELATVLARGQGEERKIAEMELLNAQARYQALEVMYAHRDITA 231


>gi|146341570|ref|YP_001206618.1| multidrug resistance membrane protein [Bradyrhizobium sp. ORS278]
 gi|146194376|emb|CAL78401.1| putative multidrug resistance membrane protein (MFP family)
           [Bradyrhizobium sp. ORS278]
          Length = 288

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/181 (9%), Positives = 60/181 (33%), Gaps = 7/181 (3%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE- 261
           + + + + + + D  + +  + ++   +   +         ++          +   +E 
Sbjct: 67  QPVHQGDVIFRIDRARFKLALQQADAVVAGRLATLNQANADLDRYRSLTTEAVSQQKQEQ 126

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           +    +Q Q ++   ++   + +   E+  + +P+ G I          Y    + +M +
Sbjct: 127 VLATQQQAQASYDQALADQAVAKLNLERSDVHAPVNGVITNMDVR-PGAYVSAGKGVMAL 185

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V  +   ++       ++  ++ G    +R         +     +E I   I  +D   
Sbjct: 186 V-DTDTLHVEGYFEETKLPRIRVGAPVRIRL----MGTGEVLTGHVESIAAGIEDRDRAE 240

Query: 382 Q 382
            
Sbjct: 241 G 241



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/255 (11%), Positives = 87/255 (34%), Gaps = 11/255 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              ++V++    SG + +  V +   + QG  +   +       +      +      ++
Sbjct: 43  VRADIVQVAPDVSGFVTEVLVRDNQPVHQGDVIFRIDRARFKLALQQADAVVAGRLATLN 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++  D    +    E   + ++EQ+L    +  ++  +       +     +  +   
Sbjct: 103 --QANADLDRYRSLTTEAVSQQKQEQVLATQQQAQASYDQALADQAVAKLNLERSDVHAP 160

Query: 172 RSIYLNRLDLE--NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            +  +  +D+      S  + +++    D   ++  FE+  + +  +    RI    T E
Sbjct: 161 VNGVITNMDVRPGAYVSAGKGVMALVDTDTLHVEGYFEETKLPRIRVGAPVRIRLMGTGE 220

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +       +++   I    D    E A+ L  ++     N    A  +     L+ T  +
Sbjct: 221 V--LTGHVESIAAGIE---DRDRAEGASLLANVTPTF--NWVRLAQRVPVRIALDDTSRR 273

Query: 290 KTILSPIAGTIVYNQ 304
             +++  + T+    
Sbjct: 274 SELVAGRSATVEVLN 288


>gi|153801738|ref|ZP_01956324.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153825688|ref|ZP_01978355.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|229530433|ref|ZP_04419821.1| membrane-fusion protein [Vibrio cholerae 12129(1)]
 gi|124122703|gb|EAY41446.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|149740625|gb|EDM54734.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|229332206|gb|EEN97694.1| membrane-fusion protein [Vibrio cholerae 12129(1)]
 gi|327483432|gb|AEA77839.1| Membrane-fusion protein [Vibrio cholerae LMA3894-4]
          Length = 366

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 20/183 (10%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLE--QNQRTFADEMSKLTILEKTREQKTI 292
            + +     +     E N   A   K +  ++          D  S L+ +++  +   +
Sbjct: 120 AQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQV 179

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +         ++     P+  I+       I A V+ + IQHV+    A +RF
Sbjct: 180 RAPFDGVVETLPI-EKGDFVGIGDPVASII-DLHKLVIEADVSERHIQHVQLEQAARIRF 237

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                I   + +  +  I  + S   N       + + +++ +   +     +  G  AE
Sbjct: 238 -----IDGTQTQGKVRYISRLSSPATNT------FAIEVEVDNPQQA-----IPAGVSAE 281

Query: 413 VLF 415
           V  
Sbjct: 282 VEL 284



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I + ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIELYGRTAPDRQAK-IGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 127 AQLKVRQ----QEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 183 FDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLEQAA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGTQTQGKVRYISRL 253


>gi|73974720|ref|XP_857253.1| PREDICTED: similar to plectin 1 isoform 1 isoform 6 [Canis
            familiaris]
          Length = 4691

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1487 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1546

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1547 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKARQVEAAERSRVRIEEEIR------- 1599

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1600 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1658

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1659 AELALRVKAEAEAAREKQR 1677



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 11/226 (4%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2327 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRNQVEEELFSVRVQ 2380

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2381 MEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQL 2440

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++DL   + L EK    +    Q+   +      L++     +   R + E  ++   +
Sbjct: 2441 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKEQMAQQ 2500

Query: 255  FANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             A   +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2501 LAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2546



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2376 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2435

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2436 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKE 2495

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2496 QMAQQLAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2555

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2556 EIGEKLHRTELATQEKVTLVHTLEIQRQQSD 2586



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 58/204 (28%), Gaps = 7/204 (3%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  +   +  L                + + L +   + E + L  +        ++  
Sbjct: 1462 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1521

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  ++ +      R +       E  +   +    S Q++L  ++   E    ++ 
Sbjct: 1522 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1581

Query: 215  D-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLE 267
              +   ER   +   E+R    + +   R       E         E     ++   + E
Sbjct: 1582 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAE 1641

Query: 268  QNQRTFADEMSKLTILEKTREQKT 291
            + +R   DE  +    E     + 
Sbjct: 1642 RLRRQVQDESQRKRQAEAELALRV 1665



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/229 (10%), Positives = 72/229 (31%), Gaps = 16/229 (6%)

Query: 75   GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNKYD 125
            G ++ +   L      +  + I   ++ +   +  ++           +S  + +  +Y 
Sbjct: 1406 GEKVDECQQLAK----QYINAIKDYELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYV 1461

Query: 126  VLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLEN 183
             L   +         ++     T  ++              + +L  + +    +  L  
Sbjct: 1462 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1521

Query: 184  KSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +     
Sbjct: 1522 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1581

Query: 243  HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1582 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAE 1630



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 65/191 (34%), Gaps = 2/191 (1%)

Query: 89   DIETTDLIDLKKVSIKNL-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +E +   +  K+ +  + R     E+ A  F     ++ EK   +           +  
Sbjct: 2519 QLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVHTL 2578

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +  +   +   R+   +L R +        L  + S     +   ++ L   + L E
Sbjct: 2579 EIQRQQSDHDAERLRAAITELEREKEKLQEEATLLQQKSE-EMQVVQQEQLLQETRALQE 2637

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                 ++ L Q+ER + +   +L +   ++    + + E       +     +++   +E
Sbjct: 2638 SFLSEKDRLLQRERFIEQEKAKLEQLFRDEVAKAQKLREEQQRQQQQMEQEREQLVASME 2697

Query: 268  QNQRTFADEMS 278
            + ++   +   
Sbjct: 2698 EARQCQREAEE 2708



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1695 RLRQAEADRARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEA 1754

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  R+++    RL L+ +    +  L+  + +    +  
Sbjct: 1755 ERRAQQQAEAERAREEAEQELERWRLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1814

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ ++     +   A  E   
Sbjct: 1815 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLVAEQELIRLRAETEQGE 1870

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1871 QQRQLLEEELARLQREAAAATHKRQELEAELAK 1903



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1600 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1653

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1654 KRQAEAE--LALRVKAEAEAAREKQRALQALEDVRLQAEEAERRLRQAEADRARQVQVAL 1711

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1712 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEAERRAQQQAEAERARE 1769

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  ++LE+ +    + +      E+  +QK++
Sbjct: 1770 EAEQELERWRLKANEALRLRLQAEEVAQQKSL 1801



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 63/185 (34%), Gaps = 13/185 (7%)

Query: 125  DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + L    ++ E      L +  +   K      +      + +  R R +    L+ + +
Sbjct: 1784 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1843

Query: 185  SSLLRALLSS-HQKDLTMMKNLFEKNAVSQN----DLNQQERIVYKS-------TLELRE 232
             +   A      +++L  ++   E+    +     +L + +R    +         EL +
Sbjct: 1844 LAEGTAQQRLVAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATHKRQELEAELAK 1903

Query: 233  NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               E + +L       +E+        + +  +     R  A+E ++L  L +  +++  
Sbjct: 1904 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-ASRFRELAEEAARLRALAEETKRQRQ 1962

Query: 293  LSPIA 297
            L+   
Sbjct: 1963 LAEED 1967



 Score = 36.5 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 64/204 (31%), Gaps = 12/204 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E T L    ++++K      +  +   +    +   LE       EQ            +
Sbjct: 1988 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLE-------EQAAQHKADIEERLA 2040

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYL---NRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            ++     + + R   +    +R         L L+       A  +  + +L  +++  E
Sbjct: 2041 QLRKASENELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAE 2100

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                S+     +     +   E  +   E +  ++      +EA  +  + L+E+ R   
Sbjct: 2101 DTLRSKEQAELEATRQRQLAAEEEQRRREAEERVQKSLAAEEEAARQRKSALEEVERLKA 2160

Query: 268  --QNQRTFADEMSKLTILEKTREQ 289
              +  R   +   + +  +    Q
Sbjct: 2161 KVEEARRLRERAEQESARQLQLAQ 2184


>gi|134300760|ref|YP_001114256.1| RND family efflux transporter MFP subunit [Desulfotomaculum
           reducens MI-1]
 gi|134053460|gb|ABO51431.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           reducens MI-1]
          Length = 431

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 87/275 (31%), Gaps = 35/275 (12%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL--LRALLSSHQKDLTMMKN 204
               ++    +  +Y+    KL  + +        +++ +L    A     +  L  M  
Sbjct: 106 QVLGRLDTQELGRLYQQAVAKLAGLEAQLARAKATDDQLTLEYNTASYEKAKNQLDRMTE 165

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENI--HEQKNMLRHINELYDEANLEFANYLKEI 262
           L    AV++ +L Q +    K+  + +E +   +Q    + I  L  + +L         
Sbjct: 166 LHRGGAVAKTELEQAKVDFAKAEADYKEALMKVQQGASAKEIASLQSQVDL--------- 216

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
                  ++  +    +L +     ++        G +++  +        +   L+  V
Sbjct: 217 ------CKQEVSQAKERLDLATFICKE-------DGVVLFVGA-EKGTRVLEGTRLLA-V 261

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  + A V       +K G    +          KKF   + ++  +  ++D+   
Sbjct: 262 GSDSKLEVIANVNEIDAGTLKVGQPVAISCTSLP---GKKFSGEVTRVAGVAVKEDSTSG 318

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                   +    +    + + L+ G+  +V    
Sbjct: 319 NSN----TIVPVTIQVEGDTLGLKPGYTVDVSIIT 349



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 81/223 (36%), Gaps = 18/223 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV S+G++       E  +P    + +  V+ G ++ +G  L   +  E   L    
Sbjct: 65  IEQSVMSTGKLE-SAEKQEFFTPVDSTLMEISVKVGDRLKKGQVLGRLDTQELGRLYQQA 123

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL------GKYHSTCSKVF 153
              +  L   +   K+  D L  +Y+         +   +  L       K     +KV 
Sbjct: 124 VAKLAGLEAQLARAKATDDQLTLEYNTASYEKAKNQLDRMTELHRGGAVAKTELEQAKVD 183

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK----- 208
                + Y+   MK+ +  +       L+++  L +  +S  ++ L +   + ++     
Sbjct: 184 FAKAEADYKEALMKV-QQGASAKEIASLQSQVDLCKQEVSQAKERLDLATFICKEDGVVL 242

Query: 209 --NAVSQNDLNQQERIVY---KSTLELRENIHEQKNMLRHINE 246
              A     + +  R++     S LE+  N++E       + +
Sbjct: 243 FVGAEKGTRVLEGTRLLAVGSDSKLEVIANVNEIDAGTLKVGQ 285


>gi|319943426|ref|ZP_08017708.1| macrolide efflux ABC superfamily ATP binding cassette transporter,
           ATP-binding/permease protein [Lautropia mirabilis ATCC
           51599]
 gi|319743241|gb|EFV95646.1| macrolide efflux ABC superfamily ATP binding cassette transporter,
           ATP-binding/permease protein [Lautropia mirabilis ATCC
           51599]
          Length = 425

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 66/181 (36%), Gaps = 14/181 (7%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITW-----------SILLPIEISVSSSGEILNED 54
                R+    L  +T+L ++   G   W                I++ ++++G +    
Sbjct: 11  TAGQSRSWRRWLAMVTVLLLLAAGGWWWWRPPPVTPPTARVTRADIQLLITATGTVEPRR 70

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ +  SG +K+  V+ G  + +G  LL  +      +++  + S+ +L+     ++
Sbjct: 71  YV-DVGAQVSGQVKRIHVQVGDDVKRGQLLLEIDPEVQQAVVEGARASLASLQAQEVEQR 129

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
             +   + +     +  +       D          ++    I+S+   ++     +R+ 
Sbjct: 130 VQMRLASQQLKRRRRLLKQDAATREDLENA--EAALEMAQARIASLQAKMQETRATLRAE 187

Query: 175 Y 175
            
Sbjct: 188 E 188



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 71/223 (31%), Gaps = 17/223 (7%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R   +     +      ++      +V     + +    S  + R+ ++    + R  L 
Sbjct: 40  RPPPVTPPTARVTRADIQLLITATGTVEPRRYVDVGAQVSGQVKRIHVQVGDDVKRGQL- 98

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             + D  + + + E    S   L  QE +  +  + L     +++  L   +    E   
Sbjct: 99  LLEIDPEVQQAVVEGARASLASLQAQE-VEQRVQMRLASQQLKRRRRLLKQDAATREDLE 157

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                L+     +   Q    +  + L   E       I +P+ GT++  +       A+
Sbjct: 158 NAEAALEMAQARIASLQAKMQETRATLRAEETRLSYTRIYAPMDGTVIALE-------AR 210

Query: 314 QSQPL--------MKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + Q L        M  +       +R +V+   +Q V  G   
Sbjct: 211 EGQTLNATYQTPRMMRIADLATMTVRTRVSEADVQGVTAGMPV 253


>gi|289667186|ref|ZP_06488261.1| RND family efflux transporter MFP subunit [Xanthomonas campestris
           pv. musacearum NCPPB4381]
          Length = 338

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 52/169 (30%), Gaps = 14/169 (8%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +     +    D+   Q +     + +       +Q  I SP+ G ++     S    A 
Sbjct: 3   KEQETQRIAELDMRAAQSSVQSLQAAVQSARYDLDQTIIRSPVHGVVLERLVESGQTVAS 62

Query: 314 QSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
             +   L +I        I   V    I  + +G         Y + + +    +  +I 
Sbjct: 63  SFETPTLFRIAEDLSKLKIELAVDEADIGKIIEGNPVYFSVDAYPNRKFEGV-VVQRRIA 121

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           P I   +        + V++++T+         L  G  A+   +    
Sbjct: 122 PNIQGNNAT------FPVVVEVTNPEGF-----LIPGMLADATISVAER 159


>gi|260167219|ref|ZP_05754030.1| HlyD family secretion protein [Brucella sp. F5/99]
 gi|261756623|ref|ZP_06000332.1| secretion protein HlyD [Brucella sp. F5/99]
 gi|261736607|gb|EEY24603.1| secretion protein HlyD [Brucella sp. F5/99]
          Length = 314

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/396 (12%), Positives = 114/396 (28%), Gaps = 85/396 (21%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M+LL +I  +  +  +            GE +    +   +      ++   V+ G ++ 
Sbjct: 1   MSLLCVIPFVSSLFAACGTQSLAVGYVEGEFVQLAPLQVAQ------VRDIAVKRGDRVE 54

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P+ T ED +                  I   ++       +  +       R E++ 
Sbjct: 55  AGEPIATVEDTD----------------ARIAVAQAEAALAQAQVQLANLQVGKRPEEIA 98

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                                    LE      RA     Q+ L
Sbjct: 99  V----------------------------------------LEAAVRSARAQADDAQRTL 118

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++L  +   +Q  L+     +  +   + ++       +  +    +E         
Sbjct: 119 LRTRDLARRGVATQAQLDDAATQLEVAEAAIGQSTANL--AVGKLPARPEEIKA------ 170

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                     +       ++L   +  R Q+TI +P AG I      +  + A  S P++
Sbjct: 171 ---------AENAVKSAEAQLQTAKWQRAQRTIEAPAAGRITDV-VRNPGDIAGPSAPVL 220

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++P      ++  +  ++   V  G         + D      +A +  + P       
Sbjct: 221 TMLP-DGAVKLKVYIPEERFSDVAVGSV----LSVHCDGCAPGLQARVSYVSPDPEFTPP 275

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + + E  + ++ + +    D    L+ G   +V  
Sbjct: 276 VIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 311


>gi|256059326|ref|ZP_05449528.1| secretion protein HlyD family protein [Brucella neotomae 5K33]
 gi|261323285|ref|ZP_05962482.1| secretion protein HlyD family protein [Brucella neotomae 5K33]
 gi|261299265|gb|EEY02762.1| secretion protein HlyD family protein [Brucella neotomae 5K33]
          Length = 314

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/396 (12%), Positives = 114/396 (28%), Gaps = 85/396 (21%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M+LL +I  +  +  +            GE +    +   +      ++   V+ G ++ 
Sbjct: 1   MSLLCVIPFVSSLFAACGTQSLAVGYVEGEFVQLAPLQVAQ------VRDIAVKRGDRVE 54

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P+ T ED +                  I   ++       +  +       R E++ 
Sbjct: 55  AGEPIATVEDTD----------------ARIAVAQAEAALAQAQAQIANLQVGKRPEEIA 98

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                                    LE      RA     Q+ L
Sbjct: 99  V----------------------------------------LEAAVRSARAQADDAQRTL 118

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++L  +   +Q  L+     +  +   + ++       +  +    +E         
Sbjct: 119 LRTRDLARRGVATQAQLDDAATQLEVAEAAIGQSTANL--AVGKLPARPEEIKA------ 170

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                     +       ++L   +  R Q+TI +P AG I      +  + A  S P++
Sbjct: 171 ---------AENAVKSAEAQLQTAKWQRAQRTIEAPAAGRITDV-VRNPGDIAGPSAPVL 220

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++P      ++  +  ++   V  G         + D      +A +  + P       
Sbjct: 221 TMLP-DGAVKLKVYIPEERFSDVAVGSV----LSVHCDGCAPGLQARVSYVSPDPEFTPP 275

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + + E  + ++ + +    D    L+ G   +V  
Sbjct: 276 VIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 311


>gi|119385663|ref|YP_916718.1| RND family efflux transporter MFP subunit [Paracoccus denitrificans
           PD1222]
 gi|119376258|gb|ABL71022.1| efflux transporter, RND family, MFP subunit [Paracoccus
           denitrificans PD1222]
          Length = 444

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 95/296 (32%), Gaps = 58/296 (19%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q+   + +      +    G          +   +R+      +L+ + +  RA+L+  
Sbjct: 109 AQVSGRITELAVVLGQRVEQGDLIARIDSVQQANELRTAQAALANLKAQMAERRAVLALA 168

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +K L   +NL   NA S++ ++  ++ V         ++   +           E  +E 
Sbjct: 169 EKTLERQQNLIRSNAASRSTMDSAQQDV---------DVARAQIAALQAQIAQAEVAIEI 219

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A                               +   I +P+AGT++      +       
Sbjct: 220 ART---------------------------DLDYTRITAPMAGTVLAI-VSQAGQTVNAV 251

Query: 316 QPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP- 372
           Q    IV         + A+++   I  V+ G    VRF    D   + ++ +++ I P 
Sbjct: 252 QSSPTIVVLGQLDRMDVHAEISEADIGKVRPGQK--VRFSLLDDS-GRSYEGVLDSIAPA 308

Query: 373 ------IISQQ----DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                   + Q     ++     YY  I+ +      + +  LR+   A+V     
Sbjct: 309 PQSIVNDSAIQGGTGTDSSSGAIYYTGIVPV-----ENPDGRLRSYMTAQVSIVLG 359



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 21/141 (14%)

Query: 16  SLKRMTLLSIIGIIGLITWSILL--------------------PIEISVSSSGEILNEDN 55
            +++  LL +I    +  W+ L                      +E+SV + G +    N
Sbjct: 45  PMRKPVLLVLIAAALVTLWAGLAGITQGKPATPGYISAEVSRGSLEVSVLAEGRLKPS-N 103

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
           +V + +  SG I +  V  G ++ QG  +   + ++  + +   + ++ NL+  +   ++
Sbjct: 104 LVAVGAQVSGRITELAVVLGQRVEQGDLIARIDSVQQANELRTAQAALANLKAQMAERRA 163

Query: 116 ALDFLNNKYDVLEKAFESREE 136
            L       +  +    S   
Sbjct: 164 VLALAEKTLERQQNLIRSNAA 184


>gi|41322919|ref|NP_958784.1| plectin isoform 1b [Homo sapiens]
 gi|40849940|gb|AAR95682.1| plectin 8 [Homo sapiens]
          Length = 4547

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 59/199 (29%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1343 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1402

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++    +    +  +++ K+    A   S  +    ++       
Sbjct: 1403 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR------- 1455

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1456 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1514

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1515 VELASRVKAEAEAAREKQR 1533



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2183 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2238

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2239 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2298

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2299 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2358

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2359 EETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2402



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++        +  ++ LR   + E   +     + +  E++    EE++     +  +T 
Sbjct: 1409 VDAQQQKRSIQEELQQLRQSSEAE---IQAKARQAEAAERSRLRIEEEIRVVRLQLEATE 1465

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +            L+    R       +   + ++  LR  +    +     +      
Sbjct: 1466 RQ-----RGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASR 1520

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQ 268
              ++ +  ++++   ++  ELR    E +  LR    E   +  +      +    +L+ 
Sbjct: 1521 VKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQS 1580

Query: 269  NQRTFADEMSKLT 281
             + +FA++ ++L 
Sbjct: 1581 KRASFAEKTAQLE 1593



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2232 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2291

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2292 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2351

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2352 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2411

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2412 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2442



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1640 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1699

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1700 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1756

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1757 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1808

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1809 LAEEAKRQRQLAEED 1823



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 6/148 (4%)

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +     ++            ++  L + R +       + ++      L    ++  + +
Sbjct: 1345 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1404

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                       D  QQ+R + +   +LR++   +        E  + + L     ++ + 
Sbjct: 1405 EEAA------VDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR 1458

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
              LE  +R       +L  L    E+  
Sbjct: 1459 LQLEATERQRGGAEGELQALRARAEEAE 1486



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 54/183 (29%), Gaps = 8/183 (4%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + F++     +E+     E+Q  +   +     + +      +   +         +  L
Sbjct: 1334 IKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKEL 1393

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-------QERIVYKSTLE 229
             +   E       A + + Q+  ++ + L +    S+ ++          ER   +   E
Sbjct: 1394 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1453

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +R    + +   R       E         +E      Q Q        ++    + + Q
Sbjct: 1454 IRVVRLQLEATERQRGGAEGELQA-LRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQ 1512

Query: 290  KTI 292
              +
Sbjct: 1513 AEV 1515



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2320 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2379

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL R+  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2380 AEAERLKL-RVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2437

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2438 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2477



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1551 RLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1610

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1611 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1670

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1671 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1726

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1727 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1759



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1456 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1509

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1510 KRQAEVE--LASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1567

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1568 ETAQRSA--EAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1625

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1626 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1657


>gi|303327060|ref|ZP_07357502.1| putative spidroin-2 [Desulfovibrio sp. 3_1_syn3]
 gi|302863048|gb|EFL85980.1| putative spidroin-2 [Desulfovibrio sp. 3_1_syn3]
          Length = 404

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 97/326 (29%), Gaps = 54/326 (16%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           + +  V  +   FS  ++   V  G  +  G P+   +  +    +        +LR   
Sbjct: 55  VLDGMVYTVSPEFSARLEALSVREGDSVTAGQPVGRMDADDYARHLREAGQEAASLR--- 111

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                         D+ E A   R+ Q  +                        +  + R
Sbjct: 112 ------------PPDMAEMAGRLRQAQEAE------------------------RAMVQR 135

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +            +           Q +L  + +   + A S++     +R   ++    
Sbjct: 136 LAQARHEEEAKRRRREERVTEHVRAQLNLRSLDSRGGERAASKSRYAAAQRAEAEARA-- 193

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISR--DLEQNQRTFADEMSKLTILEKTRE 288
              + + K     ++ +    + E      E+ R   L    R      S+       + 
Sbjct: 194 --RMEDAKADFEQVSRMRAAMDQELGRVRDEVLRAKQLASRNRYVVPGSSRTAAPLPAQA 251

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS----KLTYIRAKVTPKQIQHVKK 344
             T+ +P+ G ++   S +     Q+ +P++ I+P      +  +++A       + ++ 
Sbjct: 252 DGTLYAPVNGRVLR-GSAAPGQVVQRGEPVLLILPEGADAAQSFWVQAYFPLAAGEAIRA 310

Query: 345 GYTATVRFPHYADIREKKFKAIIEKI 370
           G    VR          +    + ++
Sbjct: 311 GQACEVRL----MSDGMRLNGTVAEV 332


>gi|296137237|ref|YP_003644479.1| efflux transporter, RND family, MFP subunit [Thiomonas intermedia
           K12]
 gi|295797359|gb|ADG32149.1| efflux transporter, RND family, MFP subunit [Thiomonas intermedia
           K12]
          Length = 394

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 68/211 (32%), Gaps = 24/211 (11%)

Query: 225 KSTLELRENIHEQKNML--RHINELYDEANLEFANYLKEI----SRDLEQNQRTFADEMS 278
               +L+  + + +  L    I    DEA L+     + +      ++   Q        
Sbjct: 111 AQLAQLQAQVGQLQAQLNLAQITLARDEAQLKVQAISQAVVDTDRANVTSVQAQLKALAE 170

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           ++   +    Q T+ +P AG ++  +  +   Y      ++ +        I   V   Q
Sbjct: 171 QINAQKAVLAQATVTAPFAG-VLGIRQVNLGQYLAPGTAVVTLQALD-PMDIDFTVPQNQ 228

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  V  G  A +          K F+A +  ++P I+    NL       V  +I     
Sbjct: 229 IDLVHVGMKAELTTNA---APGKTFEAKVIAVEPQINTATRNLT------VRARIP---- 275

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
            +   EL  G  A +  T         I  P
Sbjct: 276 -NPKGELLPGVFATIRLTDGE--PRNYITLP 303



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/101 (10%), Positives = 34/101 (33%), Gaps = 2/101 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLNN 122
           G++      +G ++  G  L    D      +   +  +  L+  ++  +  L  D    
Sbjct: 82  GVVTAIHFRSGEKVRAGQVLAQINDAPQRAQLAQLQAQVGQLQAQLNLAQITLARDEAQL 141

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           K   + +A    +   +  +       ++  N   + + ++
Sbjct: 142 KVQAISQAVVDTDRANVTSVQAQLKALAEQINAQKAVLAQA 182


>gi|229587716|ref|YP_002869835.1| hypothetical protein PFLU0139 [Pseudomonas fluorescens SBW25]
 gi|229359582|emb|CAY46424.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 296

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 75/221 (33%), Gaps = 19/221 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           AV Q+      R    +  + +E + +     R         NL  +  L+E    + + 
Sbjct: 77  AVDQDRFKLALRQAQAAVADRQETLAQ---AQREYKRNRGLGNLVPSEQLEESQSRVARA 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   A+    +   +   ++  I SP+ G +   ++  +  +    +P++ +V  S   +
Sbjct: 134 QSALAEAQVTVDSAQLNLDRSVIRSPVDGYVND-RAPRAQEFVTAGRPVLSVV-DSNSFH 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQD 378
           I       ++  +  G +  +R            ++I+  I+           P ++   
Sbjct: 192 IDGYFEETKLDGIHVGMSVDIRVIGDNARLRGHVQSIVAGIEDRDRSSGSNLLPNVNPAF 251

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + ++  +   V +   D+     +  +  G  A V      
Sbjct: 252 SWVRLAQRIPVRIAFDDV---PADFRMIAGRTATVSIIGDK 289



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 19/173 (10%), Positives = 59/173 (34%), Gaps = 23/173 (13%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW--------SILLPIEISVSSSGEILNEDNVVEIK 60
           +K+      + +  L I+    ++ W        +     +  + +        ++V+I 
Sbjct: 1   MKKPFLTIGRVVLTLLIVTFAVVVVWRMVMYYMFAPWTR-DGHIRA--------DIVQIA 51

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG+I++  V +   + +G  L   +       +   + ++ + +  +   +      
Sbjct: 52  PDVSGLIQRVDVRDNQLVTKGQVLFAVDQDRFKLALRQAQAAVADRQETLAQAQREYKRN 111

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
               +++        EQL +   +     S +    ++     L +  + +RS
Sbjct: 112 RGLGNLVPS------EQLEESQSRVARAQSALAEAQVTVDSAQLNLDRSVIRS 158


>gi|220918653|ref|YP_002493957.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956507|gb|ACL66891.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 420

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/204 (9%), Positives = 65/204 (31%), Gaps = 10/204 (4%)

Query: 33  TWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
            W++   P+   V +SG ++    +  + +  +G +   +V+ G  +  G  L+  +D E
Sbjct: 46  GWAVERRPLVQRVVASGRVMAPARIQ-VGAVATGKVAAVRVDEGDAVRAGDLLVQLDDAE 104

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
               +   +  +      ++  +       ++          R+ +L   L +     ++
Sbjct: 105 ARAALSQARAQVLQAAARLEQSRGPAARGASEA--------LRQAELRVELAERARERAR 156

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             +   S+    L      +      R     +++         +     +        V
Sbjct: 157 SLSDAGSASVAQLDDAEQALALARSARESALAQAAAAGGGGPDQRLAEAALAAARGAEEV 216

Query: 212 SQNDLNQQERIVYKSTLELRENIH 235
           ++  L  ++     +   +  ++ 
Sbjct: 217 ARARLEDRQLRAPAAATVILRDVE 240


>gi|220918265|ref|YP_002493569.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956119|gb|ACL66503.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 430

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 87/291 (29%), Gaps = 56/291 (19%)

Query: 137 QLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTR--MRSIYLNRLDLENKSSLLRALL 192
           Q+   +    S     FN  +    V   +  +L R  +     N +  E   +  RA  
Sbjct: 63  QVGSQVSGRISELRADFNSRVRKGEVIARIDPQLFRAAVAQAKANTVAAEGNLAKARAQA 122

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +   + L   + L E+N V+  DL+  +     +   ++                     
Sbjct: 123 ADADRQLGRTRQLAERNLVAAADLDTAQANADGARAGVQA-------------------- 162

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                            Q T A   + L   +       I+SP  G ++           
Sbjct: 163 ----------------AQGTLAQTRAALQQAQVNLGYTDIVSPTNGVVISRNVD-VGQTV 205

Query: 313 QQS--QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
             S   P++ ++        +   V    +  ++ G  AT     Y +     F   + +
Sbjct: 206 AASLQAPILFVIAEDLAKMQVDTSVAEADVGRLRAGMPATFTVDAYPNE---VFSGTVRQ 262

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +    +   N +     Y+ ++ +     ++  ++L+ G  A V F     
Sbjct: 263 VRNASTTVQNVVT----YDAVVDV-----ANPELKLKPGMTATVTFVYAQR 304


>gi|126729360|ref|ZP_01745174.1| putative transport transmembrane protein [Sagittula stellata E-37]
 gi|126710350|gb|EBA09402.1| putative transport transmembrane protein [Sagittula stellata E-37]
          Length = 387

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/336 (12%), Positives = 93/336 (27%), Gaps = 50/336 (14%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +D +T   + + +V   +    +    S      ++  V  +    R       +G    
Sbjct: 29  DDSQTLPAVTVAEVKTASFVQRVPI--SGNVVARDEVLVDPEVSGHRIAAFEVDIGDEVE 86

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           T   +       + R L+++   +     +     ++ +  +A L      L   + L +
Sbjct: 87  TGDVLARLDERVLRRQLQLRELALSQAEASLEQARSQVAADQAQLDQANSVLDRAQRLRD 146

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
               +Q  L+        +   L  +          I E               I+RDL 
Sbjct: 147 SGTGTQASLDDAIAAQAAAQSALTASSDGITVAQSQIEEAK-------------INRDL- 192

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
                               +  TI +P+ G +   +     +     Q + +I+     
Sbjct: 193 ---------------ASDDLDNATITAPVDGIVTA-RDAQIGSTVSSGQTIFRIL-RDGA 235

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + A+V   ++  +  G  A ++               +  IDP +             
Sbjct: 236 VDVEAEVVETELGQISSGDRAELQIAG-----IGATVGTVRSIDPTVDPVTR-------- 282

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
             +++I   A       LR G  A         T  
Sbjct: 283 LGVVEIEPEAKEG----LRPGLFAGGWIITAERTSL 314



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 38/98 (38%), Gaps = 6/98 (6%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           PI  +V +  E+L +  V          I  F+V+ G ++  G  L   ++      + L
Sbjct: 52  PISGNVVARDEVLVDPEV------SGHRIAAFEVDIGDEVETGDVLARLDERVLRRQLQL 105

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           +++++      ++  +S +     + D      +  + 
Sbjct: 106 RELALSQAEASLEQARSQVAADQAQLDQANSVLDRAQR 143


>gi|73974726|ref|XP_539204.2| PREDICTED: similar to plectin 1 isoform 1 isoform 1 [Canis
            familiaris]
          Length = 4686

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1482 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1541

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1542 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKARQVEAAERSRVRIEEEIR------- 1594

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1595 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1653

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1654 AELALRVKAEAEAAREKQR 1672



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 11/226 (4%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2322 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRNQVEEELFSVRVQ 2375

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2376 MEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQL 2435

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++DL   + L EK    +    Q+   +      L++     +   R + E  ++   +
Sbjct: 2436 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKEQMAQQ 2495

Query: 255  FANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             A   +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2496 LAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2541



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2371 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2430

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2431 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKE 2490

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2491 QMAQQLAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2550

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2551 EIGEKLHRTELATQEKVTLVHTLEIQRQQSD 2581



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 58/204 (28%), Gaps = 7/204 (3%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  +   +  L                + + L +   + E + L  +        ++  
Sbjct: 1457 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1516

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  ++ +      R +       E  +   +    S Q++L  ++   E    ++ 
Sbjct: 1517 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1576

Query: 215  D-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLE 267
              +   ER   +   E+R    + +   R       E         E     ++   + E
Sbjct: 1577 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAE 1636

Query: 268  QNQRTFADEMSKLTILEKTREQKT 291
            + +R   DE  +    E     + 
Sbjct: 1637 RLRRQVQDESQRKRQAEAELALRV 1660



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/229 (10%), Positives = 72/229 (31%), Gaps = 16/229 (6%)

Query: 75   GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNKYD 125
            G ++ +   L      +  + I   ++ +   +  ++           +S  + +  +Y 
Sbjct: 1401 GEKVDECQQLAK----QYINAIKDYELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYV 1456

Query: 126  VLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLEN 183
             L   +         ++     T  ++              + +L  + +    +  L  
Sbjct: 1457 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1516

Query: 184  KSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +     
Sbjct: 1517 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1576

Query: 243  HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1577 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAE 1625



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 65/191 (34%), Gaps = 2/191 (1%)

Query: 89   DIETTDLIDLKKVSIKNL-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +E +   +  K+ +  + R     E+ A  F     ++ EK   +           +  
Sbjct: 2514 QLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVHTL 2573

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +  +   +   R+   +L R +        L  + S     +   ++ L   + L E
Sbjct: 2574 EIQRQQSDHDAERLRAAITELEREKEKLQEEATLLQQKSE-EMQVVQQEQLLQETRALQE 2632

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                 ++ L Q+ER + +   +L +   ++    + + E       +     +++   +E
Sbjct: 2633 SFLSEKDRLLQRERFIEQEKAKLEQLFRDEVAKAQKLREEQQRQQQQMEQEREQLVASME 2692

Query: 268  QNQRTFADEMS 278
            + ++   +   
Sbjct: 2693 EARQCQREAEE 2703



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1690 RLRQAEADRARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEA 1749

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  R+++    RL L+ +    +  L+  + +    +  
Sbjct: 1750 ERRAQQQAEAERAREEAEQELERWRLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1809

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ ++     +   A  E   
Sbjct: 1810 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLVAEQELIRLRAETEQGE 1865

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1866 QQRQLLEEELARLQREAAAATHKRQELEAELAK 1898



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1595 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1648

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1649 KRQAEAE--LALRVKAEAEAAREKQRALQALEDVRLQAEEAERRLRQAEADRARQVQVAL 1706

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1707 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEAERRAQQQAEAERARE 1764

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  ++LE+ +    + +      E+  +QK++
Sbjct: 1765 EAEQELERWRLKANEALRLRLQAEEVAQQKSL 1796



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 63/185 (34%), Gaps = 13/185 (7%)

Query: 125  DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + L    ++ E      L +  +   K      +      + +  R R +    L+ + +
Sbjct: 1779 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1838

Query: 185  SSLLRALLSS-HQKDLTMMKNLFEKNAVSQN----DLNQQERIVYKS-------TLELRE 232
             +   A      +++L  ++   E+    +     +L + +R    +         EL +
Sbjct: 1839 LAEGTAQQRLVAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATHKRQELEAELAK 1898

Query: 233  NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               E + +L       +E+        + +  +     R  A+E ++L  L +  +++  
Sbjct: 1899 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-ASRFRELAEEAARLRALAEETKRQRQ 1957

Query: 293  LSPIA 297
            L+   
Sbjct: 1958 LAEED 1962



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 64/204 (31%), Gaps = 12/204 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E T L    ++++K      +  +   +    +   LE       EQ            +
Sbjct: 1983 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLE-------EQAAQHKADIEERLA 2035

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYL---NRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            ++     + + R   +    +R         L L+       A  +  + +L  +++  E
Sbjct: 2036 QLRKASENELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAE 2095

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                S+     +     +   E  +   E +  ++      +EA  +  + L+E+ R   
Sbjct: 2096 DTLRSKEQAELEATRQRQLAAEEEQRRREAEERVQKSLAAEEEAARQRKSALEEVERLKA 2155

Query: 268  --QNQRTFADEMSKLTILEKTREQ 289
              +  R   +   + +  +    Q
Sbjct: 2156 KVEEARRLRERAEQESARQLQLAQ 2179


>gi|77456401|ref|YP_345906.1| secretion protein HlyD [Pseudomonas fluorescens Pf0-1]
 gi|77380404|gb|ABA71917.1| putative exported protein [Pseudomonas fluorescens Pf0-1]
          Length = 295

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 66/182 (36%), Gaps = 7/182 (3%)

Query: 204 NLFEKNAVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            L ++  V    D ++ +  + ++   + +         R         NL  A  L+E 
Sbjct: 67  QLVKRGQVLFSIDQDRFKLALRQARAAVADREETLAQAQREAKRNRGLGNLVPAEQLEES 126

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + + Q   A+ +  +   +   ++  I SP+ G +   ++  S  +    +P++ +V
Sbjct: 127 LSKVARAQSALAEALVAVDSAQLNLDRSVIRSPVDGYVND-RAPRSQEFVTAGRPVLSVV 185

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
             S   +I       ++  +  G +  +R          + +  +E I   I  +D +  
Sbjct: 186 -DSNSFHIDGYFEETKLDGIHVGQSVDIRV----IGDRARLRGHVESIVAGIEDRDRSSG 240

Query: 383 TQ 384
           + 
Sbjct: 241 SN 242



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 62/173 (35%), Gaps = 23/173 (13%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW--------SILLPIEISVSSSGEILNEDNVVEIK 60
           +K+      + +  L I+    ++ W        +     +  + +        ++V+I 
Sbjct: 1   MKKPFLTLGRVVLTLLIVTFAVVVVWRMVMYYMFAPWTR-DGHIRA--------DIVQIA 51

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG+I++ +V++   + +G  L + +       +   + ++ +    +   +      
Sbjct: 52  PDVSGLIQQVEVKDNQLVKRGQVLFSIDQDRFKLALRQARAAVADREETLAQAQREAKRN 111

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
               +++        EQL + L K     S +    ++     L +  + +RS
Sbjct: 112 RGLGNLVPA------EQLEESLSKVARAQSALAEALVAVDSAQLNLDRSVIRS 158


>gi|114320545|ref|YP_742228.1| RND family efflux transporter MFP subunit [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114226939|gb|ABI56738.1| efflux transporter, RND family, MFP subunit [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 502

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 55/174 (31%), Gaps = 33/174 (18%)

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           +R+  +     AD + ++    +      + +P  G +      +   + Q    +M I 
Sbjct: 178 ARERLRALGMPADAIRQVEQQGRALNLVPVKAPQDGVVQALNV-AEGMFVQPGTEVMSIA 236

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
             S++  I A +   Q   V++G  A V FP       +     +  I P ++       
Sbjct: 237 DLSRIWVI-ADLFEHQSDAVREGLDAEVHFP---FRPGETLVGSVGYIYPTLASPTRT-- 290

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGF-----------------PAEVLFTAKN 419
                 +  +IT     + +  L+ G                  PAE +     
Sbjct: 291 ------IRARIT---LDNPDGRLKPGMWTDVHIDGESTEPVLHVPAEAVIRTGR 335


>gi|330809456|ref|YP_004353918.1| multidrug resistance efflux pump [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377564|gb|AEA68914.1| putative multidrug resistance efflux pump [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 343

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 63/183 (34%), Gaps = 18/183 (9%)

Query: 248 YDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             +A L+ A    +I   DLE+ +   A   +   I +       I +PI+GT+   +S 
Sbjct: 168 KSQAGLQAARQYVDILKADLEKAKAALAHAEAAQAIAQLQLSYTRITAPISGTV-GEKSI 226

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
               +    +PL+ IVP     YI A     Q+  V+ G T  +          +  +  
Sbjct: 227 RVGAFVNAGKPLLAIVPLD-AVYITANFRETQLARVETGQTVDIEVDALP---GQALEGT 282

Query: 367 IEKIDPII----SQQDNNLQTQEYYE------VILKITDLAFSDNNIELRNGFPAEVLFT 416
           ++ + P      S    +  T  + +      V ++I          +LR G        
Sbjct: 283 VQSLGPASGVSYSAIAPHNATGNFTKIVQRLPVRIRIDPD--QPGAAKLRVGMSVTPHIR 340

Query: 417 AKN 419
              
Sbjct: 341 IGE 343



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 49/143 (34%), Gaps = 2/143 (1%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            +    SG ++   VE+   + +G  L T +D +    ++  +  + + R  I + ++ L
Sbjct: 48  TVAPQVSGTVETVLVEDNQPVKKGDLLATIDDRDFVAAVNAAQAQVASARAGIASLQAHL 107

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +  + +       +     L   +    +      S   ++ +    ++     +
Sbjct: 108 --IQQETTIRQAQAVVAADAAALKLASVNQARYRNLATDGSGTVQAQQQAEAQLSVQLAS 165

Query: 178 RLDLENKSSLLRALLSSHQKDLT 200
           R   +      R  +   + DL 
Sbjct: 166 RDKSQAGLQAARQYVDILKADLE 188


>gi|225628910|ref|ZP_03786944.1| HlyD family secretion protein [Brucella ceti str. Cudo]
 gi|237817207|ref|ZP_04596199.1| HlyD family secretion protein [Brucella abortus str. 2308 A]
 gi|260544892|ref|ZP_05820713.1| secretion protein HlyD [Brucella abortus NCTC 8038]
 gi|260564577|ref|ZP_05835062.1| secretion protein HlyD [Brucella melitensis bv. 1 str. 16M]
 gi|260568225|ref|ZP_05838694.1| secretion protein HlyD [Brucella suis bv. 4 str. 40]
 gi|260756757|ref|ZP_05869105.1| secretion protein HlyD family protein [Brucella abortus bv. 6 str.
           870]
 gi|260763426|ref|ZP_05875758.1| secretion protein HlyD family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882572|ref|ZP_05894186.1| secretion protein HlyD family protein [Brucella abortus bv. 9 str.
           C68]
 gi|261215931|ref|ZP_05930212.1| secretion protein HlyD family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|261220311|ref|ZP_05934592.1| secretion protein HlyD family protein [Brucella ceti B1/94]
 gi|261319308|ref|ZP_05958505.1| secretion protein HlyD family protein [Brucella pinnipedialis
           B2/94]
 gi|261750191|ref|ZP_05993900.1| secretion protein HlyD family protein [Brucella suis bv. 5 str.
           513]
 gi|261756632|ref|ZP_06000341.1| secretion protein HlyD [Brucella sp. F5/99]
 gi|265986692|ref|ZP_06099249.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M292/94/1]
 gi|265989792|ref|ZP_06102349.1| secretion protein HlyD family protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265993099|ref|ZP_06105656.1| secretion protein HlyD family protein [Brucella melitensis bv. 3
           str. Ether]
 gi|265996342|ref|ZP_06108899.1| secretion protein HlyD family protein [Brucella ceti M490/95/1]
 gi|265999133|ref|ZP_05465120.2| secretion protein HlyD [Brucella melitensis bv. 2 str. 63/9]
 gi|294853719|ref|ZP_06794391.1| HlyD family secretion protein [Brucella sp. NVSL 07-0026]
 gi|225616756|gb|EEH13804.1| HlyD family secretion protein [Brucella ceti str. Cudo]
 gi|237788020|gb|EEP62236.1| HlyD family secretion protein [Brucella abortus str. 2308 A]
 gi|260098163|gb|EEW82037.1| secretion protein HlyD [Brucella abortus NCTC 8038]
 gi|260152220|gb|EEW87313.1| secretion protein HlyD [Brucella melitensis bv. 1 str. 16M]
 gi|260154890|gb|EEW89971.1| secretion protein HlyD [Brucella suis bv. 4 str. 40]
 gi|260673847|gb|EEX60668.1| secretion protein HlyD family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676865|gb|EEX63686.1| secretion protein HlyD family protein [Brucella abortus bv. 6 str.
           870]
 gi|260872100|gb|EEX79169.1| secretion protein HlyD family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260917538|gb|EEX84399.1| secretion protein HlyD family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260918895|gb|EEX85548.1| secretion protein HlyD family protein [Brucella ceti B1/94]
 gi|261298531|gb|EEY02028.1| secretion protein HlyD family protein [Brucella pinnipedialis
           B2/94]
 gi|261736616|gb|EEY24612.1| secretion protein HlyD [Brucella sp. F5/99]
 gi|261739944|gb|EEY27870.1| secretion protein HlyD family protein [Brucella suis bv. 5 str.
           513]
 gi|262550639|gb|EEZ06800.1| secretion protein HlyD family protein [Brucella ceti M490/95/1]
 gi|262763969|gb|EEZ10001.1| secretion protein HlyD family protein [Brucella melitensis bv. 3
           str. Ether]
 gi|263000461|gb|EEZ13151.1| secretion protein HlyD family protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263092374|gb|EEZ16627.1| secretion protein HlyD [Brucella melitensis bv. 2 str. 63/9]
 gi|264658889|gb|EEZ29150.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M292/94/1]
 gi|294819374|gb|EFG36374.1| HlyD family secretion protein [Brucella sp. NVSL 07-0026]
          Length = 353

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 81  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 140

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++        +    + +       +       D+A    A   +++   +   + 
Sbjct: 141 NTVRVDALLPRGVTT----QSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 196

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 197 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVPAVK-- 253

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 254 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 310

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 311 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 350


>gi|148360688|ref|YP_001251895.1| HlyD family transporter secretion protein [Legionella pneumophila
           str. Corby]
 gi|296106247|ref|YP_003617947.1| HlyD family secretion protein [Legionella pneumophila 2300/99
           Alcoy]
 gi|148282461|gb|ABQ56549.1| HlyD family secretion protein [Legionella pneumophila str. Corby]
 gi|295648148|gb|ADG23995.1| HlyD family secretion protein [Legionella pneumophila 2300/99
           Alcoy]
          Length = 281

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 65/203 (32%), Gaps = 17/203 (8%)

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  +  +L++ I  QKN  R     E   +          +     + +    +   + L
Sbjct: 86  LEMAKAQLKQAIANQKNASRTYKRREQLVDDGAVSKALFDDAVAMKDSSSAEVSVAKANL 145

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              + +     I +P  GTI+  +          ++P+  +       ++R  +    + 
Sbjct: 146 EKAQISLNDTEIHAPTHGTILT-RIQEPGAIVNVAEPVYTLA-IDNPVWVRTYIDEPFLG 203

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS-----QQDNNLQTQEYYEVILKITD 395
            +  G  A V   +     EK +K  I  I P         +   L+T   Y + + I  
Sbjct: 204 RIYPGQDALV---YTDSNPEKPYKGHIGFISPQAEFTPKIVETTQLRTDLVYRIRVVIDQ 260

Query: 396 LAFSDNNIELRNGFPAEVLFTAK 418
                    LR G P  V    K
Sbjct: 261 PDNG-----LRQGMPVTVKIHLK 278



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 32/106 (30%), Gaps = 3/106 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFL 120
           SG I    V+ G+ + +G  L   +       +++ K  +K       +        + L
Sbjct: 54  SGRILSMDVDEGAHVKKGQLLARLDKDTFIANLEMAKAQLKQAIANQKNASRTYKRREQL 113

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            +   V +  F+           +     + +    IS     +  
Sbjct: 114 VDDGAVSKALFDDAVAMKDSSSAEVSVAKANLEKAQISLNDTEIHA 159


>gi|37222134|gb|AAP49327.1| Uvs054 [uncultured bacterium]
          Length = 390

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 84/225 (37%), Gaps = 10/225 (4%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           +   +   ++ P ++K+  L  +I I+  + W +L   +     + +   +  V+ +   
Sbjct: 22  NAEAQQPPQDAPRTVKKGGLAIVITIVLSLLWYLLA--DRYTPYTTQARIDGYVIGVAPQ 79

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG + K  V N   + +G PL T ++ +    ++  +  + N    +    + +D    
Sbjct: 80  VSGTVTKVWVNNNQHVKEGQPLFTIDNSQYQIAVNKARSDLDNAVRQVGAGSAVVDAAKA 139

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +   A E +  Q  + L + +   S   +  +  V R+   +      +     D++
Sbjct: 140 NL-LAAHANERKARQDAERLERLYKEDSGTISVRLLEVARASLDQAKA--QVTAAEADIQ 196

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
                +    S+    L   +      AV++ +L+     V  S+
Sbjct: 197 GAIEQMGGEDSTANTILNTART-----AVAKAELDLANTEVKASS 236


>gi|83717429|ref|YP_439278.1| multidrug resistance protein [Burkholderia thailandensis E264]
 gi|83651254|gb|ABC35318.1| multidrug resistance protein [Burkholderia thailandensis E264]
          Length = 488

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 57/167 (34%), Gaps = 9/167 (5%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL---- 266
             + DL   ++          E +  ++      +    +A L  A    E +R L    
Sbjct: 229 AREADLKLAQQAYRARAGASVEVVAPEELARAKSSLANAQAALAGAQAQLEAARALGSER 288

Query: 267 -EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
             +         ++  +  +   + TI+SP+ GT+   +S           PLM +V   
Sbjct: 289 PVEQNPAVQQAAAQFKLAYRNLRRTTIVSPVDGTV-GQRSVQIGQQVGPGVPLMSVV-QL 346

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +  ++ A     QI+H++ G    +    Y       +   +E +  
Sbjct: 347 RQVWVEANFKEGQIRHMRVGQPVRLESDLYGARVT--YHGRVEGVSA 391



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 60/180 (33%), Gaps = 12/180 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-------SIK 104
              NVV+I +   G +    V +  Q+  G  L+  +D + +      +         + 
Sbjct: 155 VAGNVVQIAAQIQGTVTDVLVADTQQVKAGQALVKLDDADASAAFAQARAQLAQAVRQVA 214

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           N R  +   +  +        + ++A+ +R    ++ +       +K       +     
Sbjct: 215 NTRLSMGMYEETVKAREADLKLAQQAYRARAGASVEVVAPEELARAKSSLANAQAALAGA 274

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + +L   R++   R   +N +        +  +     +NL     VS  D    +R V 
Sbjct: 275 QAQLEAARALGSERPVEQNPAVQ-----QAAAQFKLAYRNLRRTTIVSPVDGTVGQRSVQ 329


>gi|28900078|ref|NP_799733.1| HlyD family secretion protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365731|ref|ZP_05778227.1| macrolide-specific efflux protein MacA [Vibrio parahaemolyticus
           K5030]
 gi|260880653|ref|ZP_05893008.1| macrolide-specific efflux protein MacA [Vibrio parahaemolyticus
           AN-5034]
 gi|269965602|ref|ZP_06179715.1| putative HlyD family secretion protein [Vibrio alginolyticus 40B]
 gi|28808361|dbj|BAC61566.1| putative HlyD family secretion protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|269829670|gb|EEZ83906.1| putative HlyD family secretion protein [Vibrio alginolyticus 40B]
 gi|308092302|gb|EFO41997.1| macrolide-specific efflux protein MacA [Vibrio parahaemolyticus
           AN-5034]
 gi|308115028|gb|EFO52568.1| macrolide-specific efflux protein MacA [Vibrio parahaemolyticus
           K5030]
          Length = 391

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 81/293 (27%), Gaps = 54/293 (18%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q+   + +           G          +   ++    +   L  +    +A +   
Sbjct: 63  AQVSGQIQRLAVNLGDEIKQGDLIAQIDSLTQQNSLKEAQASLNSLNAQYQAKQAQIKQA 122

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +    K +    A S+ D    E  +     EL +   E +    +++          
Sbjct: 123 NYEYVRQKGMLAAKASSRADYENAEATLAIYKAELAQLDAEIEKAKINVDN--------- 173

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                       +      TI +P+ GT+VY            +
Sbjct: 174 ---------------------------AQLDLGYTTINAPMDGTVVYTAV-EEGQTVNAN 205

Query: 316 QPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP- 372
           Q    I+  +      ++A+++   +  V  G TA   F       + +FK  +  I+P 
Sbjct: 206 QTTPTIIELAKLDTMTVKAEISEADVIFVHPGQTA--LFTILGKPNQ-QFKGTLRAIEPG 262

Query: 373 ------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   S    +     YY  +  +      +    LR G  A+V    + 
Sbjct: 263 PTIMDGDDSDLSISDSDAIYYNAVFDV-----KNPQGILRIGMTAQVSIVLEQ 310



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 53/130 (40%), Gaps = 3/130 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE +V ++G +     +V + +  SG I++  V  G +I QG  +   + +   + + 
Sbjct: 41  GNIEKAVLANGMLQAS-KLVNVGAQVSGQIQRLAVNLGDEIKQGDLIAQIDSLTQQNSLK 99

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S+ +L      +++ +   N +Y   +    ++     D+     +    ++   +
Sbjct: 100 EAQASLNSLNAQYQAKQAQIKQANYEYVRQKGMLAAKASSRADYENAEATLA--IYKAEL 157

Query: 158 SSVYRSLKMK 167
           + +   ++  
Sbjct: 158 AQLDAEIEKA 167


>gi|330895772|gb|EGH28061.1| secretion protein HlyD [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 388

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 4/188 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V+ G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVKEGQQVKAGDLLATLDDRSIRAALEQARAQL 113

Query: 104 KNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +  +D  +  L     L     +  + F+ ++  +           + +    +   
Sbjct: 114 AQSKAQLDVAQLDLKRYRQLTQDNGISRQTFDQQQAMVRQLEATAKGNEASINASQVQLS 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y  ++  +T    I         + S    L S  Q D   ++    +  +        E
Sbjct: 174 YTQIRSPVTGRVGIRNVDEGNFLRVSDAAGLFSVTQIDPIAVEFSLPQQMLPTLQGLTAE 233

Query: 221 RIVYKSTL 228
           R       
Sbjct: 234 RNAATVKA 241



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 75/252 (29%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L ++       +   + +       +R  + + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVKEG----QQVKAGDLLATLDDRSIRAALEQARAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTQDNGISRQTFDQQQAMVRQLEATAKGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P       +   A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDAAGLFSVTQIDPIAVEFSLPQQMLPTLQGLTAERNAA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TV+              +  +  ID  +S     ++               F +   +L 
Sbjct: 238 TVKAYQGDGAANGLLLGEGTLSLIDNQVSAGTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|269103117|ref|ZP_06155814.1| membrane fusion component of tripartite multidrug resistance system
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268163015|gb|EEZ41511.1| membrane fusion component of tripartite multidrug resistance system
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 347

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 62/220 (28%), Gaps = 24/220 (10%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   +     + ++      +     L          A L+  Q     +K+L  K    
Sbjct: 84  YQAQLDEAKAAYELATQNNAATDDAILAASANVKTAMAQLNDAQSTYRRIKDLVNKKLYP 143

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q +L+  +  +  +   +         +++       +A                     
Sbjct: 144 QQELDDAKAKLSTAENNVEAARANMSQLIKSQGAKGKDA-------------------PE 184

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                + L+    +     I +   G +         +     Q LM +V  +   +++A
Sbjct: 185 VKKAAAALSQASLSLSYTNIFADHDGKLGKVSVH-PGSVVAPGQALMPLVEAN-TYWVQA 242

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                Q+  +  G  AT+    Y DI    F   I  I P
Sbjct: 243 NFKEDQVGRMHIGMPATIELDLYPDI---DFHGTIAAISP 279


>gi|269102525|ref|ZP_06155222.1| hypothetical protein VDA_001951 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268162423|gb|EEZ40919.1| hypothetical protein VDA_001951 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 347

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 103/257 (40%), Gaps = 29/257 (11%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           + +  ++ ++ +I L++ + E K++  ++      +   + +   ++  VSQ D      
Sbjct: 117 QEIDAQIEKLPAINLDKYNQEIKNA--KSSFLKVNEIKKLYEKYRKQGQVSQVDY----- 169

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                      NI    ++ +   EL    + E A +  + ++          D   KL 
Sbjct: 170 ----------ANIINTASVAKQ-RELQSSISKEQALFSYDQNKLAGPLMLLRNDIGLKLI 218

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
             +  + + +I+SP++G IV N   +   + Q+ Q LM I P+ +   I   V  K +  
Sbjct: 219 SYQSQQNELSIVSPVSGFIVENYV-TEGQWVQKGQELMTIAPYRQPEVIS-YVDAKYLAK 276

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT---DLAF 398
           V KG    V+ P        ++ AI+    P ++ +  +  T  + E    +    +   
Sbjct: 277 VAKGSEVMVQLP-----NGGQYSAIVRS-KPRLATKLPSQLTTPFTETKAVLKVVLEFNN 330

Query: 399 SDNNIELRNGFPAEVLF 415
             N+++   G P +V+ 
Sbjct: 331 HVNDLDWVEGMPVKVII 347



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 18/50 (36%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
           I SP SG I +  V  G  + +G  L+T       ++I            
Sbjct: 229 IVSPVSGFIVENYVTEGQWVQKGQELMTIAPYRQPEVISYVDAKYLAKVA 278


>gi|254720506|ref|ZP_05182317.1| secretion protein HlyD family protein [Brucella sp. 83/13]
 gi|306838126|ref|ZP_07470983.1| secretion protein HlyD family protein [Brucella sp. NF 2653]
 gi|306406863|gb|EFM63085.1| secretion protein HlyD family protein [Brucella sp. NF 2653]
          Length = 349

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 85/280 (30%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  +        + E       A + + +  ++  K   E    
Sbjct: 77  LFEIDSRSYQQKLDQALAALDGKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 136

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++          +  + +       +       D+A    A   +++   +   + 
Sbjct: 137 NTVRVDAL----LPRGVATQSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 192

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 193 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVPAVK-- 249

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 250 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 306

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 307 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 346


>gi|227536564|ref|ZP_03966613.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227243641|gb|EEI93656.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 415

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 77/208 (37%), Gaps = 24/208 (11%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             ++  DL + +  +  +  +++    E       +     E N      L+++  +L  
Sbjct: 115 GVINNPDLIKTQEQLQLTHNQIKLAEVELLRQKELV-----EGNAAPLKRLQQVEMELAN 169

Query: 269 NQRTFADEMSKLTI---LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
            +        +L       +   Q +I++P++GTI    +    +    S P+++IV ++
Sbjct: 170 LRAQRNSLQKQLIAGGGSTQMSSQVSIIAPMSGTISTIAA-QIGSNINASSPILEIV-NN 227

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           +  ++   V  K +  V+KG    +RF    +  E  ++A I++I      Q N +    
Sbjct: 228 ESLHVDVYVYEKDLPKVRKGQ--LIRFSAVNN-PELSYEARIDQIGQAFEAQTNAVAVH- 283

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
                          +   L NG   + 
Sbjct: 284 ----------AQVLGDKTGLINGMQVQA 301



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/239 (12%), Positives = 82/239 (34%), Gaps = 11/239 (4%)

Query: 40  IEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTF---EDIETTDL 95
           +   +  +G++   ++    + S F G++++  V+ G  + +G  +      + I+T + 
Sbjct: 69  LSDGLVLNGQLTVPNDKKAFVTSVFGGVLQQLFVQQGDVVSKGQRIGVINNPDLIKTQEQ 128

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           + L    IK     +  +K  ++        L++     E +L +   + +S   ++   
Sbjct: 129 LQLTHNQIKLAEVELLRQKELVEGNAAPLKRLQQV----EMELANLRAQRNSLQKQLIAG 184

Query: 156 GISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
           G S+   S    +  M          + +  +    +L     +   +     +  + + 
Sbjct: 185 GGSTQMSSQVSIIAPMSGTISTIAAQIGSNINASSPILEIVNNESLHVDVYVYEKDLPKV 244

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
              Q  R    +  EL  +   + + +    E    A    A  L + +  +   Q   
Sbjct: 245 RKGQLIRFSAVNNPEL--SYEARIDQIGQAFEAQTNAVAVHAQVLGDKTGLINGMQVQA 301


>gi|193214360|ref|YP_001995559.1| RND family efflux transporter MFP subunit [Chloroherpeton
           thalassium ATCC 35110]
 gi|193087837|gb|ACF13112.1| efflux transporter, RND family, MFP subunit [Chloroherpeton
           thalassium ATCC 35110]
          Length = 447

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 75/258 (29%), Gaps = 50/258 (19%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           ++    +     +    + KS   +A L     +    K LFEK  VS++D    +    
Sbjct: 110 ELLQAEVEQQEASLSAAKAKSLQSKAQLLLADDEFRRTKELFEKKLVSESDFITAKTNAD 169

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            +      ++ E   +   + +                                      
Sbjct: 170 VAKATYEASLFEINRVESLLKQSR------------------------------------ 193

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQ----QSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
               + T+ +P++GTI    +                ++KI        I  +V    I 
Sbjct: 194 DQLSRTTVYAPMSGTITVLNNKLGERVVATSQYTGTEVLKIA-DLSSMEIMVEVNENDIV 252

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKI-DPIISQQDNNLQTQEYYEVILKITDLAFS 399
           +VK   T+ +    Y D     F   + +I    ++  +   +    ++V ++I D    
Sbjct: 253 NVKLADTSRIYVDAYPDRT---FMGTVTEIASTAVTTSEGTQEEVTNFDVTIRILDHEQL 309

Query: 400 DNNIELRNGFPAEVLFTA 417
                LR G  A      
Sbjct: 310 -----LRPGMSATADIET 322



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 73/197 (37%), Gaps = 2/197 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +I+  I   VS++G+I  E  V  I    SG I    V+ G  + +G  L   +      
Sbjct: 56  AIVKNITQIVSATGKIQPETEV-VISPDVSGEIIALPVKEGQHVEKGALLFRIKPELLQA 114

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL-GKYHSTCSKVF 153
            ++ ++ S+   +      K+ L   ++++   ++ FE +     DF+  K ++  +K  
Sbjct: 115 EVEQQEASLSAAKAKSLQSKAQLLLADDEFRRTKELFEKKLVSESDFITAKTNADVAKAT 174

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     ++  L + R            S  +  L +   + +           +  
Sbjct: 175 YEASLFEINRVESLLKQSRDQLSRTTVYAPMSGTITVLNNKLGERVVATSQYTGTEVLKI 234

Query: 214 NDLNQQERIVYKSTLEL 230
            DL+  E +V  +  ++
Sbjct: 235 ADLSSMEIMVEVNENDI 251


>gi|190151169|ref|YP_001969694.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303251160|ref|ZP_07337344.1| hypothetical protein APP6_2177 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303252691|ref|ZP_07338853.1| hypothetical protein APP2_1669 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|189916300|gb|ACE62552.1| probable macrolide-specific efflux protein [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302648430|gb|EFL78624.1| hypothetical protein APP2_1669 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302650011|gb|EFL80183.1| hypothetical protein APP6_2177 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 384

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 54/146 (36%), Gaps = 1/146 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I+ +V +SG +   + V +I +  SG IK   V+ G ++ +G  L   +       + 
Sbjct: 40  GNIQKTVIASGTLQATEQV-DIGAQVSGQIKHILVQEGQKVKKGELLAVIDPRLAETELK 98

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           L K  + N   ++DT+K  L  L + ++  ++   +      +         +      I
Sbjct: 99  LAKAELANASANLDTKKINLKQLQSDWERHQRLIRTNATSQKETEEAKSRLNTAKAELQI 158

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +     +           L   ++ +
Sbjct: 159 AQNNLDIAKIRVEKAETELGYTEIRS 184



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 85/267 (31%), Gaps = 16/267 (5%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            ++    +  +++      L +   + K   L A++     +  +         +++ +L
Sbjct: 53  QATEQVDIGAQVSGQIKHILVQEGQKVKKGELLAVIDPRLAETELK--------LAKAEL 104

Query: 217 NQQERIVYKSTLELRENIH--EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                 +    + L++     E+   L   N    +   E  + L     +L+  Q    
Sbjct: 105 ANASANLDTKKINLKQLQSDWERHQRLIRTNATSQKETEEAKSRLNTAKAELQIAQNNLD 164

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYIRAK 333
               ++   E       I SP+  T++   + +        Q P++  + +     +  K
Sbjct: 165 IAKIRVEKAETELGYTEIRSPLDATVISVFAQNGQTLVTTQQVPVLMKLANIDTMKVNTK 224

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           ++   + H++ G   +      +D +      +++     I+    N     YY    K+
Sbjct: 225 ISEADVIHIQAGAPTSFTLLGESDSQFHGQLDMVKLAPVHITDTTENTNNAIYYYATFKV 284

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
                 + +  LR    A V       
Sbjct: 285 P-----NPDHRLRISMTAAVTIMLDKR 306


>gi|294492030|gb|ADE90786.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli IHE3034]
 gi|307627795|gb|ADN72099.1| hypothetical protein UM146_13670 [Escherichia coli UM146]
 gi|315287181|gb|EFU46593.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 110-3]
 gi|323190921|gb|EFZ76188.1| hlyD family secretion family protein [Escherichia coli RN587/1]
          Length = 331

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +      K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPNKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPNKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|240948680|ref|ZP_04753052.1| membrane-fusion protein [Actinobacillus minor NM305]
 gi|240296896|gb|EER47474.1| membrane-fusion protein [Actinobacillus minor NM305]
          Length = 388

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 54/292 (18%), Positives = 109/292 (37%), Gaps = 45/292 (15%)

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRM--RSIYLNRLDLENKSSLL---RALLSSHQK 197
           G   ++        +S    SL +KL +   +   +  +D  N+S+ L    A L+S+Q 
Sbjct: 53  GSVRASQRTEVGAQVSGKIISLNVKLGQAVKKGDLIAEIDASNQSNSLSTAEASLASYQA 112

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   +   E   V+Q++  +  ++    +  L  ++   KN L       D        
Sbjct: 113 KLKSAQVALE---VAQSNYTRLSKLYKSDSASL-SDLETAKNTLASAKATVD-------- 160

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
              E+   ++  Q +  D        +       I+SP+ G IV     S       +Q 
Sbjct: 161 ---EVKSQIQTAQISVND-------AKTNLNYTQIISPMDGIIVSVPV-SVGQTVNSNQT 209

Query: 318 LMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
              IV  +      I+ +++   I  V++G    +RF   A+   + +++ I+ +DP ++
Sbjct: 210 SPTIVQVADLSKMLIKLEISEGDIAQVQEGQ--EIRFTTLAEPD-RTYQSKIDTVDPALT 266

Query: 376 QQDNNLQTQE-------YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              +N  T+E       YY     + +   +DN + +  G   +        
Sbjct: 267 TLTDNNYTEESGNTEAIYYYANALVDN---ADNRLRI--GMTVQGQVNIAKR 313



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 55/142 (38%), Gaps = 6/142 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+ +V ++G +       E+ +  SG I    V+ G  + +G  +   +    ++ +   
Sbjct: 45  IDKNVLATGSVRAS-QRTEVGAQVSGKIISLNVKLGQAVKKGDLIAEIDASNQSNSLSTA 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S+ + +  + + + AL+   + Y  L K ++S    L D       T         ++
Sbjct: 104 EASLASYQAKLKSAQVALEVAQSNYTRLSKLYKSDSASLSDL-----ETAKNTLASAKAT 158

Query: 160 VYRSLKMKLTRMRSIYLNRLDL 181
           V        T   S+   + +L
Sbjct: 159 VDEVKSQIQTAQISVNDAKTNL 180


>gi|15902510|ref|NP_358060.1| hypothetical protein spr0466 [Streptococcus pneumoniae R6]
 gi|15458035|gb|AAK99270.1| Conserved hypothetical protein, truncation [Streptococcus
           pneumoniae R6]
          Length = 335

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 87/290 (30%), Gaps = 12/290 (4%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +       ++ S      I+ V + +        +I  NR  L   +     L       
Sbjct: 45  VSNQANLANSSSSAIEQEITKVQQQIGEYQELRDAIINNRARLPTSNPHQSILNRYLVAS 104

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               +   E+  +SQ  +NQ    +  S   L+       ++  + N L  +  +    +
Sbjct: 105 QGQTQGTAEEPFLSQ--INQSIAGLESSIASLKIQQAGIGSVATYDNSLAAKIEVLRTQF 162

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L+  S+     +    +   +L    +  E  T+ +P  G +  N  F   N       +
Sbjct: 163 LQTASQQQLTVENQLTELKVQLDQATQRLENNTLTAPSKGIVHLNSEFEGKNRIPTGTEI 222

Query: 319 MKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            +I P    ++   I   V    +  + KG T  ++     +         ++ ID   +
Sbjct: 223 AQIFPIITDTREVLITYYVASDYLPLLDKGQTVRLKLEKIGN-HGITIIGQLQTIDQTPT 281

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           + +     +      L   D         ++ G    V       T    
Sbjct: 282 RTEQGNLFKLTALAKLSNEDSKL------IQYGLQGRVTSVTAKKTYFDY 325


>gi|87124532|ref|ZP_01080381.1| Secretion protein HlyD [Synechococcus sp. RS9917]
 gi|86168104|gb|EAQ69362.1| Secretion protein HlyD [Synechococcus sp. RS9917]
          Length = 371

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 51/383 (13%), Positives = 118/383 (30%), Gaps = 96/383 (25%)

Query: 17  LKRMTLLSIIGIIGLITW---------------SILLPIEISVSSSGEILNEDNVVEIKS 61
           L  M L +++   G   W               ++  P+  +V++ G I     V  +  
Sbjct: 21  LAGMALATLVAATGAGLWHQRSERLARDRERQEALSAPL-TTVTALGRIEPVGEVRNVVP 79

Query: 62  PFSG------IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
           P +        +++  VE G+ +  G  L   + +                         
Sbjct: 80  PAAAAAGAQVRLRRLLVEEGAWVEAGQLLAEMDSLP------------------------ 115

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                                          +   +     ++S    L++ + R RS  
Sbjct: 116 -----------------------------RLTRAVEEAEAQVASAQTQLQVAIARQRSQL 146

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
            ++     + +     L +   +    + + E+ A S +    + + +  +  +LRE   
Sbjct: 147 ESQR---ARVASAEEKLRTAAAEERRYRLIVEQGAASVSLYESKRQELEAARAQLREARA 203

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           + + +   +   +   +LE A   +++       QR  A+    L           + SP
Sbjct: 204 DLQRLETSVTTSFGPISLEEATARRDLEAARAHLQRRRAERSDAL-----------VRSP 252

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           I G +      +    A  ++ L++ V  +    + ++V     Q +  G    +  P  
Sbjct: 253 IRGRV--LSVLTRPGEAAGAEGLLE-VGQTDRMQLVSEVYQSDRQRLHVGQAVRITSPAL 309

Query: 356 ADIREKKFKAIIEKIDPIISQQD 378
           A       +  I +I  I+ +Q 
Sbjct: 310 AM----PLEGKITRIGAIVRRQS 328


>gi|222823920|ref|YP_002575494.1| AcrA/AcrE family efflux protein [Campylobacter lari RM2100]
 gi|222539142|gb|ACM64243.1| AcrA/AcrE family efflux protein [Campylobacter lari RM2100]
          Length = 377

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 97/303 (32%), Gaps = 35/303 (11%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E     + +      +V+      V   +  ++T++     + +D  +  + +       
Sbjct: 35  EAKKQDITQSIEAIGEVYAKTQVDVGAQVSGQITKLHVKLGDHVDEGDLIAQIDK--DKQ 92

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q DL + K        +Q +  +      K  L++    ++++  L        E     
Sbjct: 93  QNDLDITK--------AQLESAKANLESKKIALDIATKQYQREQKLYAKKATSLENLENL 144

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            N    +  ++   +         L   +K     TI +P  G I+             +
Sbjct: 145 KNTFYALRANVADLKAQTTQLEISLKNAQKDLAFTTITAPSKGEIINVAV-EEGQTVNAN 203

Query: 316 QPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           Q    IV  +      IR ++    I  +  G    V+F    +   KK++A+I  IDP 
Sbjct: 204 QNTPSIVRLADLSEMEIRMQIAEADINKISVGKK--VKFSILNEPD-KKYEAVISSIDPA 260

Query: 374 ISQQDNNLQTQE------------YYEVILKITDLAFSDNNIELRNGFPA--EVLFTAKN 419
            +   +                  YY   + +      ++N  LR G     E+    +N
Sbjct: 261 NTTISDATSNTNLNSSSSASTNAVYYYARVFV-----KNDNNFLRIGMSTENEIAIKTEN 315

Query: 420 TTL 422
            TL
Sbjct: 316 NTL 318



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 80/193 (41%), Gaps = 4/193 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  S+ + GE+  +  V ++ +  SG I K  V+ G  + +G  +   +  +  + +D+ 
Sbjct: 41  ITQSIEAIGEVYAKTQV-DVGAQVSGQITKLHVKLGDHVDEGDLIAQIDKDKQQNDLDIT 99

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +++ + +++++K ALD    +Y   +K +  +   L +     ++  +      ++ 
Sbjct: 100 KAQLESAKANLESKKIALDIATKQYQREQKLYAKKATSLENLENLKNTFYA--LRANVAD 157

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQ 218
           +          +++   +       +     +++   ++   +  N    + V   DL++
Sbjct: 158 LKAQTTQLEISLKNAQKDLAFTTITAPSKGEIINVAVEEGQTVNANQNTPSIVRLADLSE 217

Query: 219 QERIVYKSTLELR 231
            E  +  +  ++ 
Sbjct: 218 MEIRMQIAEADIN 230


>gi|261344572|ref|ZP_05972216.1| multidrug resistance protein A [Providencia rustigianii DSM 4541]
 gi|282567485|gb|EFB73020.1| multidrug resistance protein A [Providencia rustigianii DSM 4541]
          Length = 390

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 81/269 (30%), Gaps = 32/269 (11%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                 L   + + + +Y+N    + +    R  L+  QKD      L     +S+ DL 
Sbjct: 102 EQAKHDLATTVRKTKELYINGDQYQAQIQQNRVSLAQAQKDYQRRIALGRSGTISKEDLQ 161

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             +  V  +   L  +I +       +     +           +               
Sbjct: 162 HSQEAVQLAQAALDISIQQYNANRALLRNTALKNQPAIQQAADSVRSAWI---------- 211

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
                     ++  I SP+ G +   ++    +       LM IVP  +  ++ A     
Sbjct: 212 --------NLQRTEIKSPMTGYVSR-RNVQVGSQVSSQSSLMAIVPV-QPVWVDANYKET 261

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYY 387
           Q++ V+ G   T+    Y       +K  +  +D          P  +   N ++  +  
Sbjct: 262 QLESVRIGQPVTISSDFYGSDI--VYKGTVVGLDMGTGSAFSLLPAQNATGNWIKVVQRL 319

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V +++     + + + +       +   
Sbjct: 320 PVRVELDPEQVAKHPLRIGLSMNVTIDIK 348



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/172 (11%), Positives = 51/172 (29%), Gaps = 10/172 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI-------K 104
                + I +  +G + +   EN   +  G  L+  +        +  K  +       K
Sbjct: 57  VSGLQIPIVAQTTGNVTQVNFENTDLVKAGDVLVVLDQTNAKLSYEQAKHDLATTVRKTK 116

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L  + D  ++ +          +K ++ R                      ++     +
Sbjct: 117 ELYINGDQYQAQIQQNRVSLAQAQKDYQRRIALGRSGTISKEDLQHSQEAVQLAQAALDI 176

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQ 213
            ++        L    L+N+ ++ +A  S     + + +   +      VS+
Sbjct: 177 SIQQYNANRALLRNTALKNQPAIQQAADSVRSAWINLQRTEIKSPMTGYVSR 228


>gi|54293826|ref|YP_126241.1| hypothetical protein lpl0882 [Legionella pneumophila str. Lens]
 gi|53753658|emb|CAH15116.1| hypothetical protein lpl0882 [Legionella pneumophila str. Lens]
          Length = 338

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 80/241 (33%), Gaps = 24/241 (9%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE-QKNMLRHIN 245
            ++A+ ++   + T+M  +  +N      LN  E         L     E  ++ L+ + 
Sbjct: 40  AVQAVYATGTVEPTVMMPIASQNTARLVKLNADEGSEVVKGQILGSLEDEHLQHNLKELK 99

Query: 246 ELYDEANLEFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           E    A + +    + + +      + ++    +    + +  +E       +++P  G 
Sbjct: 100 EHETLAKIRYERNAQLVKKGVISKDEYDRTLSEWQAASAAVRRIEAQISYLQLIAPADGR 159

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I+  +          +QP+  +        + A+V  + I  V+ G    +R   + +  
Sbjct: 160 IIK-RDGEVGQLIPANQPVFWLS-CCAPLRVSAEVDEEDIVLVRVGQKVLIRSDAFPNQI 217

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              F   ++ I P       +      Y V +  ++      N  L  G  AE       
Sbjct: 218 ---FYGRVKSITPKGDPIARS------YRVRISFSE------NNPLLIGMTAETNIIVHE 262

Query: 420 T 420
            
Sbjct: 263 K 263


>gi|291538146|emb|CBL11257.1| RND family efflux transporter, MFP subunit [Roseburia intestinalis
           XB6B4]
          Length = 472

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/356 (12%), Positives = 96/356 (26%), Gaps = 78/356 (21%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V+ G  + +G  L T +     D                                
Sbjct: 83  ITAVNVQVGDIVKEGDVLCTLDSSTIQD-------------------------------- 110

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                     Q+ D       T +       +    S +   T  R+    +  L     
Sbjct: 111 ----------QIADLEKNMSDTNA-------TESINSQQTAETVSRAKEDQQTQLAAAQK 153

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +     ++     M     +K+      L   ++ V  +  + ++ +      +     
Sbjct: 154 AIDDAKDAYNAQSIMWDKSEDKSDAEFQSLLAAQKAVTTAEEDYQKVLETTNRTIEDAQR 213

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                             +L++ + + +    KLT L++  E   I +P  G +      
Sbjct: 214 AV----------------ELDKYKGSDSSSKDKLTDLKEQLEDCNITAPCGGVVTAVNV- 256

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           S  +    S+  +  +  +    + A V    I  +++G  ATV      D         
Sbjct: 257 SVGDVNADSKTPLVTIEDTSSLKMVATVEEADILKIEEGMKATVTADAMGDET---INGT 313

Query: 367 IEKIDPIISQQD--NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + ++  +  Q    +   T   Y V + +        N EL  G   +     K  
Sbjct: 314 VTRVVRVKGQSTGSDGQTTSGGYSVEISLD-------NKELLVGMEVKAKVMIKEK 362


>gi|192289471|ref|YP_001990076.1| efflux transporter RND family, MFP subunit [Rhodopseudomonas
           palustris TIE-1]
 gi|192283220|gb|ACE99600.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
           palustris TIE-1]
          Length = 432

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 72/209 (34%), Gaps = 38/209 (18%)

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              RE +   ++   ++  + D+        + E +R   +     AD +  L    +  
Sbjct: 139 AAQRELLSAARSAQSNLGGMTDQ------QLVLEAARRRLELWDVPADAIKALEATGRPG 192

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               + SPI+GT++  + F    Y      L  +V      +++ KV   ++ HV+ G  
Sbjct: 193 TSLVLRSPISGTVLEKKVF-QGQYTMPQNELF-VVADLSTVWVQGKVFEYELPHVQIGMA 250

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            TV          +++   +  IDP++ +   ++Q      V +++      + +  L+ 
Sbjct: 251 VTV---ALPSSPTQQYTGKVVFIDPVVDEMTRSVQ------VRVELP-----NPDGRLKP 296

Query: 408 GF----------------PAEVLFTAKNT 420
           G                 P   +      
Sbjct: 297 GMFSQILISHAMGSGLTVPVSAVIRTGER 325


>gi|254291235|ref|ZP_04962030.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150422799|gb|EDN14751.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 366

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 20/183 (10%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLE--QNQRTFADEMSKLTILEKTREQKTI 292
            + +     +     E N   A   K +  ++          D  S L+ +++  +   +
Sbjct: 120 AQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQV 179

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +         ++     P+  I+       I A V+ + IQHV+    A +RF
Sbjct: 180 RAPFDGVVETLPI-EKGDFVGIGDPVASII-DLHKLVIEADVSERHIQHVQLEQAARIRF 237

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                I   + +  +  I  + S   N       + + +++ +   +     +  G  AE
Sbjct: 238 -----IDGTQTQGKVRYISRLSSPATNT------FAIEVEVDNPQQA-----IPAGVSAE 281

Query: 413 VLF 415
           V  
Sbjct: 282 VEL 284



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I + ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIELYGRTAPDRQAK-IGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 127 AQLKVRQ----QEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 183 FDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLEQAA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGTQTQGKVRYISRL 253


>gi|153818928|ref|ZP_01971595.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126510545|gb|EAZ73139.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
          Length = 344

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 20/183 (10%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLE--QNQRTFADEMSKLTILEKTREQKTI 292
            + +     +     E N   A   K +  ++          D  S L+ +++  +   +
Sbjct: 120 AQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQV 179

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +         ++     P+  I+       I A V+ + IQHV+    A +RF
Sbjct: 180 RAPFDGVVETLPI-EKGDFVGIGDPVASII-DLHKLVIEADVSERHIQHVQLEQAARIRF 237

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                I   + +  +  I  + S   N       + + +++ +   +     +  G  AE
Sbjct: 238 -----IDGTQTQGKVRYISRLSSPATNT------FAIEVEVDNPQQA-----IPAGVSAE 281

Query: 413 VLF 415
           V  
Sbjct: 282 VEL 284



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I + ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIELYGRTAPDRQAK-IGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 127 AQLKVRQ----QEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 183 FDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLEQAA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGTQTQGKVRYISRL 253


>gi|120599482|ref|YP_964056.1| secretion protein HlyD family protein [Shewanella sp. W3-18-1]
 gi|120559575|gb|ABM25502.1| secretion protein HlyD family protein [Shewanella sp. W3-18-1]
 gi|319425823|gb|ADV53897.1| secretion protein HlyD family protein [Shewanella putrefaciens 200]
          Length = 332

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 60/179 (33%), Gaps = 3/179 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E + + + +P   +I +  V  G ++  G  L+  +       + L++  +   +  +
Sbjct: 33  TVERDRLTLTAPVGELITQINVVEGQRVKAGEVLIQLDATSANARLALRQAELDQAKAKL 92

Query: 111 --DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF-NYGISSVYRSLKMK 167
                 + L+ ++    VL+ A  + +E    F        +KV     + +   +    
Sbjct: 93  SEAVTGARLEDIDRAKAVLDGANATVKEAQRAFERTNRLFATKVLSQADLDTARAARDTS 152

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           L +      +   LEN +   +   +             E+ A++   L      V  +
Sbjct: 153 LAKQAEAQQSLRLLENGTRSEQLAQAKAAVAAASASVAVEQKALADLSLVAARDAVVDT 211


>gi|229525280|ref|ZP_04414685.1| membrane-fusion protein [Vibrio cholerae bv. albensis VL426]
 gi|229338861|gb|EEO03878.1| membrane-fusion protein [Vibrio cholerae bv. albensis VL426]
          Length = 366

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 60/180 (33%), Gaps = 18/180 (10%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           E+      + +    A     N   +             D  S L+ +++  +   + +P
Sbjct: 123 ERAKAQLKVRQQEFNAASALKNKGLQGEVAFANAAADLTDAQSSLSTVQRLLDNTQVRAP 182

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G +         ++     P+  I+       I A V+ + IQHV+    A +RF   
Sbjct: 183 FEGIVETLPI-EKGDFVGIGDPVASII-DLHQLVIEADVSERHIQHVQLEQAARIRF--- 237

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             I   + +  +  I  + S   N       + + +++ +   +     +  G  AEV  
Sbjct: 238 --IDGTQTQGKVRYISRLSSPATNT------FAIEVEVDNPQQA-----IPAGVSAEVEL 284



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I + ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIELYGRTAPDRQAK-IGAEIAGRIAEVKIAKGQVVTKNQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 127 AQLKVRQ----QEFNAASALKNKGLQGEVAFANAAADLTDAQSSLSTVQRLLDNTQVRAP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 183 FEGIVETLPIEKGDFVGIGDPVASIIDLHQLVIEAD---------VSERHIQHVQLEQAA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGTQTQGKVRYISRL 253


>gi|78356009|ref|YP_387458.1| secretion protein HlyD [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218414|gb|ABB37763.1| Secretion protein HlyD [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 405

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 48/152 (31%), Gaps = 16/152 (10%)

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +       + L    +  +   I SPI G +V                L+ IV      
Sbjct: 171 ARAQRDQAKAALETALEHLKDADIRSPIGGAVVERNV-EIGQAVAPGGRLLLIV-DQTSL 228

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +   +    I  +  G  A +    +           +  I+P++ ++         + 
Sbjct: 229 NLDVDLPEADIGRIVVGTVALITTDAFPGHEY---SGKVTVINPLVDRKTRT------FR 279

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + +++ + +      +L +G  A V  +A+  
Sbjct: 280 MRIEVPNPS-----GKLVDGMYARVKLSAEKR 306


>gi|113475195|ref|YP_721256.1| chromosome segregation ATPase-like protein [Trichodesmium
           erythraeum IMS101]
 gi|110166243|gb|ABG50783.1| Chromosome segregation ATPase-like protein [Trichodesmium
           erythraeum IMS101]
          Length = 985

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 80/248 (32%), Gaps = 30/248 (12%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
            + +S  +G +K+                  ++ E        +   +  +      +  
Sbjct: 66  QQHQSEANGQVKQ---------ELAETKAKLQETEKLLQESQSQKETEEFKAKWQETQQK 116

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           LD   +++  + +  E  + QL + LG+   T  ++  +         +        +  
Sbjct: 117 LDKTKSEFHDVREELERSQSQLDEVLGELEQTHFELHQFKEKGQQHQSEAN----GQVKQ 172

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              + + K      LL   Q  L  M  + E+    ++ + Q    + +S  +L++   E
Sbjct: 173 ELAETKAKLQETEQLLEESQSQLGEMMGVLEEY---KSQMEQTMGALEESQGKLQQKHEE 229

Query: 237 QKNMLRHINELYDEANLEFANYLKEI--------------SRDLEQNQRTFADEMSKLTI 282
            + +   + E       E    L+E                  LE+   T  + +S+L  
Sbjct: 230 LEQVKGELAEKQLGVESELHKELEETKSQWRETEELLEKYQSQLEETMATLEESLSQLDS 289

Query: 283 LEKTREQK 290
            +K  EQ 
Sbjct: 290 NQKELEQT 297



 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 67/198 (33%), Gaps = 12/198 (6%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +T + +D  K  + ++R  ++  +S LD +  + +         +E+      + +    
Sbjct: 18  QTQEELDKTKSELHDVREELERSQSQLDEVLGELEQTHFELHQFKEKGQQHQSEANGQVK 77

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +      + +      KL +         + + K    +  L   + +   ++       
Sbjct: 78  QELAETKAKLQE--TEKLLQESQSQKETEEFKAKWQETQQKLDKTKSEFHDVRE------ 129

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
               +L + +  + +   EL +   E         +   EAN +    L E    L++ +
Sbjct: 130 ----ELERSQSQLDEVLGELEQTHFELHQFKEKGQQHQSEANGQVKQELAETKAKLQETE 185

Query: 271 RTFADEMSKLTILEKTRE 288
           +   +  S+L  +    E
Sbjct: 186 QLLEESQSQLGEMMGVLE 203


>gi|316984380|gb|EFV63353.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
          Length = 151

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 39/147 (26%), Gaps = 14/147 (9%)

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           R ++ I +  +G I    +         S+ L+ IVP     Y    +       +K   
Sbjct: 6   RSEQIIRAGRSGYI-AIPNVEVGQQVDPSKLLLSIVPERTELYAHLYIPSSAAGFIKPKD 64

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDN-----------NLQTQEYYEVILKITD 395
              +R+  Y   +       +  +      +                 +  Y V +K   
Sbjct: 65  KVVLRYQAYPYQKFGLASGSVVSVAKTALGRQELSGLGMVSSDLAKSNEPVYLVKIKPDK 124

Query: 396 LAFS--DNNIELRNGFPAEVLFTAKNT 420
              +       L+ G   E     +  
Sbjct: 125 STITAYGEEKPLQIGMTLEADILHEKR 151


>gi|291560775|emb|CBL39575.1| RND family efflux transporter, MFP subunit [butyrate-producing
           bacterium SSC/2]
          Length = 373

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 75/194 (38%), Gaps = 24/194 (12%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           ++ +L ++I + ++ +  + +  ++++    +Y   +        R + D   KL+ L+ 
Sbjct: 102 TSSDLEDSITQLESQIETLEDTIEDSDSSDDDYASNV--------RKYKDLTMKLSTLKT 153

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
            R   T+ S   G +    + +      + Q + K++  +    +   V    I+ VKKG
Sbjct: 154 ERSNLTVTSKYNGIVSG--TITKGKTISKGQSVCKVL-KTSSYKVTINVDELDIKSVKKG 210

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            + TV       + +K F   + K+  + S  D        Y V +++++ A      +L
Sbjct: 211 QSVTV--TA-DAVEDKTFTGKVTKVSKVGSTSDGVAT----YPVTIQLSNAA------DL 257

Query: 406 RNGFPAEVLFTAKN 419
                     T   
Sbjct: 258 LPSMSVTATITTAK 271



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 2/77 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    IE +V  SG +      V   S     ++    ++G+ + +G  +      +  D
Sbjct: 51  ATTGTIEKTVEGSGSVKATTQNVTFSSDV--TVQSVLKKDGATVKKGDVIAKLTSSDLED 108

Query: 95  LIDLKKVSIKNLRCHID 111
            I   +  I+ L   I+
Sbjct: 109 SITQLESQIETLEDTIE 125


>gi|254675259|ref|NP_958795.2| plectin isoform 1g [Mus musculus]
          Length = 4550

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1347 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1406

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1407 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1459

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1460 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1518

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1519 AELALRVKAEAEAAREKQR 1537



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2187 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2240

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2241 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2300

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2301 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2357

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2358 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2406



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1644 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1703

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1704 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1753

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1754 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1812

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1813 LAEEAKRQRQLAEED 1827



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2324 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2383

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2384 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2441

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2442 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2501

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2502 EKDSLLQRERFIEQ 2515



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2236 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2295

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2296 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2355

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2356 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2415

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2416 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2446



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1345 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1404

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1405 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1464

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1465 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1524

Query: 291  T 291
             
Sbjct: 1525 V 1525



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1264 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1319

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1320 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1379

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1380 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1439

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1440 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1490



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1555 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1614

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1615 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1674

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1675 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1734

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1735 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1778



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1460 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1513

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1514 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1571

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1572 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1629

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1630 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1661


>gi|258404344|ref|YP_003197086.1| efflux transporter, RND family, MFP subunit [Desulfohalobium
           retbaense DSM 5692]
 gi|257796571|gb|ACV67508.1| efflux transporter, RND family, MFP subunit [Desulfohalobium
           retbaense DSM 5692]
          Length = 386

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 87/303 (28%), Gaps = 40/303 (13%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R      K+          V  +     E Q+   +     T     + G + +      
Sbjct: 50  RTATAHLKTISQTTTAPGTVAPRTTMRVEAQVAAQITSIAVTAGDRVSTGETLIQLEHNR 109

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             T +     + +  +++    R  L + Q +    +              Q  RI    
Sbjct: 110 LDTAVEQARQHLVKRQSQLDQARENLPAAQAEFNATQA-------------QWRRIKTYF 156

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             E        K  L      +  A        K I     Q          KL      
Sbjct: 157 KAE-----AATKQELEQARAAFHRARSRLTTARKRIG----QAAAGVEVARQKLRAARIK 207

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           R    + +P  G +   +     + A+   PL+ ++   +   + A+V   ++ HV++G+
Sbjct: 208 RGYARLTAPADGQVAK-RLADPGDQARPGTPLL-VLHTDRTLRLEARVPESRLAHVRQGH 265

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            ATV  P             IE+I P    +         + V + + D +       L+
Sbjct: 266 NATVHIPALPA----ALSGTIEEIIPSADPRTRT------FTVKVALPDYS------GLQ 309

Query: 407 NGF 409
            G 
Sbjct: 310 PGM 312



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 54/156 (34%), Gaps = 6/156 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + L  I  + ++ G +     +  +++  +  I    V  G ++  G  L+  E      
Sbjct: 54  AHLKTISQTTTAPGTVAPRTTMR-VEAQVAAQITSIAVTAGDRVSTGETLIQLEHNRLDT 112

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            ++  +  +   +  +D  +  L     +++  +      + + +    K  +   +   
Sbjct: 113 AVEQARQHLVKRQSQLDQARENLPAAQAEFNATQA-----QWRRIKTYFKAEAATKQELE 167

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              ++ +R+     T  + I      +E     LRA
Sbjct: 168 QARAAFHRARSRLTTARKRIGQAAAGVEVARQKLRA 203


>gi|254510935|ref|ZP_05123002.1| putative auxiliary transport protein, MFP family [Rhodobacteraceae
           bacterium KLH11]
 gi|221534646|gb|EEE37634.1| putative auxiliary transport protein, MFP family [Rhodobacteraceae
           bacterium KLH11]
          Length = 381

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 68/223 (30%), Gaps = 29/223 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           VF+  +      L       + +  + +          A L+    +    +NL      
Sbjct: 103 VFSLAVDKANAQLVAAQQNAKILEQDVIAASEAVERANAQLAYALTEQARYENLVPAGGA 162

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            Q++L++             E + E +  ++      ++ANL   + +  ++  + + + 
Sbjct: 163 RQDELDRW-----------NEQVAEDQAKIKEAQANLEKANLALDSQIDGVNTGILEAEA 211

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ----PLMKIVPHSKL 327
              +        E   E  TI +P  G IV  Q+          +     +   V     
Sbjct: 212 QLGE-------AEYFLENTTIYAPENGMIVSQQAR-PGMVV--GEIRLGAIASFVTEDSP 261

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             + A    + ++ V+ G    V          +     +E I
Sbjct: 262 YIL-ATFRQQNLKFVEVGQPVEV---ALDLYPGEVLNGRVEAI 300



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 55/161 (34%), Gaps = 19/161 (11%)

Query: 51  LNEDNVVEIKSPFS-GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR-- 107
           +    +  +       I+ +  VE  + + +G PL  F+D   +  +D     +   +  
Sbjct: 62  VVRSTIQIVPRLTQPTILTEVLVEPNTWVTKGEPLYKFDDTVFSLAVDKANAQLVAAQQN 121

Query: 108 ---------------CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                             + + +       +Y+ L  A  +R+++L  +  +     +K+
Sbjct: 122 AKILEQDVIAASEAVERANAQLAYALTEQARYENLVPAGGARQDELDRWNEQVAEDQAKI 181

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                +++ ++     +++  +    L+ E +       L 
Sbjct: 182 KEAQ-ANLEKANLALDSQIDGVNTGILEAEAQLGEAEYFLE 221


>gi|40849926|gb|AAR95675.1| plectin 10 [Mus musculus]
          Length = 4550

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1347 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1406

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1407 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1459

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1460 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1518

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1519 AELALRVKAEAEAAREKQR 1537



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2187 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2240

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2241 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2300

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2301 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2357

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2358 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEED 2406



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1644 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1703

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1704 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1753

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1754 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1812

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1813 LAEEAKRQRQLAEED 1827



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2324 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2383

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2384 AEAERLKL-RMVEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2441

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2442 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2501

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2502 EKDSLLQRERFIEQ 2515



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2236 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2295

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2296 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2355

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2356 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEEDAQRFRKQAE 2415

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2416 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2446



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1345 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1404

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1405 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1464

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1465 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1524

Query: 291  T 291
             
Sbjct: 1525 V 1525



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1264 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1319

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1320 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1379

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1380 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1439

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1440 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1490



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1555 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1614

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1615 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1674

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1675 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1734

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1735 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1778



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1460 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1513

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1514 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1571

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1572 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1629

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1630 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1661


>gi|41322912|ref|NP_958780.1| plectin isoform 1f [Homo sapiens]
 gi|40849932|gb|AAR95678.1| plectin 2 [Homo sapiens]
          Length = 4533

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 59/199 (29%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1329 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1388

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++    +    +  +++ K+    A   S  +    ++       
Sbjct: 1389 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR------- 1441

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1442 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1500

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1501 VELASRVKAEAEAAREKQR 1519



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2169 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2224

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2225 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2284

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2285 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2344

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2345 EETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2388



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++        +  ++ LR   + E   +     + +  E++    EE++     +  +T 
Sbjct: 1395 VDAQQQKRSIQEELQQLRQSSEAE---IQAKARQAEAAERSRLRIEEEIRVVRLQLEATE 1451

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +            L+    R       +   + ++  LR  +    +     +      
Sbjct: 1452 RQ-----RGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASR 1506

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQ 268
              ++ +  ++++   ++  ELR    E +  LR    E   +  +      +    +L+ 
Sbjct: 1507 VKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQS 1566

Query: 269  NQRTFADEMSKLT 281
             + +FA++ ++L 
Sbjct: 1567 KRASFAEKTAQLE 1579



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2218 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2277

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2278 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2337

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2338 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2397

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2398 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2428



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1626 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1685

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1686 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1742

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1743 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1794

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1795 LAEEAKRQRQLAEED 1809



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 6/148 (4%)

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +     ++            ++  L + R +       + ++      L    ++  + +
Sbjct: 1331 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1390

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                       D  QQ+R + +   +LR++   +        E  + + L     ++ + 
Sbjct: 1391 EEAA------VDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR 1444

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
              LE  +R       +L  L    E+  
Sbjct: 1445 LQLEATERQRGGAEGELQALRARAEEAE 1472



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 54/183 (29%), Gaps = 8/183 (4%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + F++     +E+     E+Q  +   +     + +      +   +         +  L
Sbjct: 1320 IKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKEL 1379

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-------QERIVYKSTLE 229
             +   E       A + + Q+  ++ + L +    S+ ++          ER   +   E
Sbjct: 1380 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1439

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +R    + +   R       E         +E      Q Q        ++    + + Q
Sbjct: 1440 IRVVRLQLEATERQRGGAEGELQA-LRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQ 1498

Query: 290  KTI 292
              +
Sbjct: 1499 AEV 1501



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2306 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2365

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL R+  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2366 AEAERLKL-RVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2423

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2424 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2463



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1537 RLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1596

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1597 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1656

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1657 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1712

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1713 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1745



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1442 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1495

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1496 KRQAEVE--LASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1553

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1554 ETAQRSA--EAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1611

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1612 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1643


>gi|41322910|ref|NP_958783.1| plectin isoform 1d [Homo sapiens]
 gi|40849938|gb|AAR95681.1| plectin 7 [Homo sapiens]
          Length = 4515

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 59/199 (29%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1311 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1370

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++    +    +  +++ K+    A   S  +    ++       
Sbjct: 1371 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR------- 1423

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1424 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1482

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1483 VELASRVKAEAEAAREKQR 1501



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2151 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2206

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2207 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2266

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2267 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2326

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2327 EETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2370



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++        +  ++ LR   + E   +     + +  E++    EE++     +  +T 
Sbjct: 1377 VDAQQQKRSIQEELQQLRQSSEAE---IQAKARQAEAAERSRLRIEEEIRVVRLQLEATE 1433

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +            L+    R       +   + ++  LR  +    +     +      
Sbjct: 1434 RQ-----RGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASR 1488

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQ 268
              ++ +  ++++   ++  ELR    E +  LR    E   +  +      +    +L+ 
Sbjct: 1489 VKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQS 1548

Query: 269  NQRTFADEMSKLT 281
             + +FA++ ++L 
Sbjct: 1549 KRASFAEKTAQLE 1561



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2200 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2259

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2260 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2319

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2320 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2379

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2380 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2410



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1608 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1667

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1668 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1724

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1725 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1776

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1777 LAEEAKRQRQLAEED 1791



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 6/148 (4%)

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +     ++            ++  L + R +       + ++      L    ++  + +
Sbjct: 1313 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1372

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                       D  QQ+R + +   +LR++   +        E  + + L     ++ + 
Sbjct: 1373 EEAA------VDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR 1426

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
              LE  +R       +L  L    E+  
Sbjct: 1427 LQLEATERQRGGAEGELQALRARAEEAE 1454



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 54/183 (29%), Gaps = 8/183 (4%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + F++     +E+     E+Q  +   +     + +      +   +         +  L
Sbjct: 1302 IKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKEL 1361

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-------QERIVYKSTLE 229
             +   E       A + + Q+  ++ + L +    S+ ++          ER   +   E
Sbjct: 1362 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1421

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +R    + +   R       E         +E      Q Q        ++    + + Q
Sbjct: 1422 IRVVRLQLEATERQRGGAEGELQA-LRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQ 1480

Query: 290  KTI 292
              +
Sbjct: 1481 AEV 1483



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2288 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2347

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL R+  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2348 AEAERLKL-RVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2405

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2406 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2445



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1519 RLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1578

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1579 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1638

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1639 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1694

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1695 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1727



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1424 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1477

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1478 KRQAEVE--LASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1535

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1536 ETAQRSA--EAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1593

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1594 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1625


>gi|41322908|ref|NP_958781.1| plectin isoform 1e [Homo sapiens]
 gi|40849934|gb|AAR95679.1| plectin 3 [Homo sapiens]
          Length = 4525

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 59/199 (29%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1321 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1380

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++    +    +  +++ K+    A   S  +    ++       
Sbjct: 1381 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR------- 1433

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1434 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1492

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1493 VELASRVKAEAEAAREKQR 1511



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2161 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2216

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2217 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2276

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2277 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2336

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2337 EETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2380



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++        +  ++ LR   + E   +     + +  E++    EE++     +  +T 
Sbjct: 1387 VDAQQQKRSIQEELQQLRQSSEAE---IQAKARQAEAAERSRLRIEEEIRVVRLQLEATE 1443

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +            L+    R       +   + ++  LR  +    +     +      
Sbjct: 1444 RQ-----RGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASR 1498

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQ 268
              ++ +  ++++   ++  ELR    E +  LR    E   +  +      +    +L+ 
Sbjct: 1499 VKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQS 1558

Query: 269  NQRTFADEMSKLT 281
             + +FA++ ++L 
Sbjct: 1559 KRASFAEKTAQLE 1571



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2210 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2269

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2270 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2329

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2330 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2389

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2390 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2420



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1618 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1677

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1678 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1734

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1735 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1786

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1787 LAEEAKRQRQLAEED 1801



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 6/148 (4%)

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +     ++            ++  L + R +       + ++      L    ++  + +
Sbjct: 1323 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1382

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                       D  QQ+R + +   +LR++   +        E  + + L     ++ + 
Sbjct: 1383 EEAA------VDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR 1436

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
              LE  +R       +L  L    E+  
Sbjct: 1437 LQLEATERQRGGAEGELQALRARAEEAE 1464



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 54/183 (29%), Gaps = 8/183 (4%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + F++     +E+     E+Q  +   +     + +      +   +         +  L
Sbjct: 1312 IKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKEL 1371

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-------QERIVYKSTLE 229
             +   E       A + + Q+  ++ + L +    S+ ++          ER   +   E
Sbjct: 1372 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1431

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +R    + +   R       E         +E      Q Q        ++    + + Q
Sbjct: 1432 IRVVRLQLEATERQRGGAEGELQA-LRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQ 1490

Query: 290  KTI 292
              +
Sbjct: 1491 AEV 1493



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2298 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2357

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL R+  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2358 AEAERLKL-RVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2415

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2416 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2455



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1529 RLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1588

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1589 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1648

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1649 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1704

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1705 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1737



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1434 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1487

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1488 KRQAEVE--LASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1545

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1546 ETAQRSA--EAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1603

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1604 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1635


>gi|28899247|ref|NP_798852.1| hypothetical protein VP2473 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260362169|ref|ZP_05775159.1| membrane-fusion protein [Vibrio parahaemolyticus K5030]
 gi|260879059|ref|ZP_05891414.1| membrane-fusion protein [Vibrio parahaemolyticus AN-5034]
 gi|260895934|ref|ZP_05904430.1| membrane-fusion protein [Vibrio parahaemolyticus Peru-466]
 gi|28807471|dbj|BAC60736.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308085383|gb|EFO35078.1| membrane-fusion protein [Vibrio parahaemolyticus Peru-466]
 gi|308089568|gb|EFO39263.1| membrane-fusion protein [Vibrio parahaemolyticus AN-5034]
 gi|308111069|gb|EFO48609.1| membrane-fusion protein [Vibrio parahaemolyticus K5030]
          Length = 371

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 71/209 (33%), Gaps = 18/209 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +++  L +Q +++        ++  ++   +  + E    A     +   +        +
Sbjct: 97  INKGQLVKQGQVIANIDKRDLDSQLKRAQAMLRVKEKEFNAAKSLKSRGLQGEVAFATAE 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               D  + L  ++   +   + +P  G IV +      ++     P+  ++   +   I
Sbjct: 157 AALVDARANLNNVQTALKNTEVKAPFDG-IVDHHFVEVGDFVGVGDPIATVI-DLETLVI 214

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A V+ + IQ++K+G  A VR      I  +     +  I  + S   N           
Sbjct: 215 EADVSERHIQYLKEGLQADVR-----TINGQHHLGTLRYIGRVSSVSTNTF--------- 260

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               ++   + N  +  G  AEV      
Sbjct: 261 --PIEIEIDNRNSLIPAGISAEVQLPLNE 287


>gi|146292520|ref|YP_001182944.1| secretion protein HlyD family protein [Shewanella putrefaciens
           CN-32]
 gi|145564210|gb|ABP75145.1| secretion protein HlyD family protein [Shewanella putrefaciens
           CN-32]
          Length = 332

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 60/179 (33%), Gaps = 3/179 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E + + + +P   +I +  V  G ++  G  L+  +       + L++  +   +  +
Sbjct: 33  TVERDRLTLTAPVGELITQINVVEGQRVKAGEVLIQLDATSANARLALRQAELDQAKAKL 92

Query: 111 --DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF-NYGISSVYRSLKMK 167
                 + L+ ++    VL+ A  + +E    F        +KV     + +   +    
Sbjct: 93  SEAVTGARLEDIDRAKAVLDGANATVKEAQRAFERTNRLFATKVLSQADLDTARAARDTS 152

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           L +      +   LEN +   +   +             E+ A++   L      V  +
Sbjct: 153 LAKQAEAQQSLRLLENGTRSEQLAQAKAAVAAASASVAVEQKALADLSLVAARDAVVDT 211


>gi|269966398|ref|ZP_06180483.1| Multidrug resistance efflux pump [Vibrio alginolyticus 40B]
 gi|269828985|gb|EEZ83234.1| Multidrug resistance efflux pump [Vibrio alginolyticus 40B]
          Length = 438

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/390 (12%), Positives = 129/390 (33%), Gaps = 83/390 (21%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           F W  L++++   + R++    +  + L  +    P++    S G ++   ++     P 
Sbjct: 48  FGWHALEQSN--QIVRLSWRFELADVRLGRFINFTPMD---LSGGSVVQSPHIQL--RPD 100

Query: 64  S----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           S    G +    +E   Q+ +G  +   +  +    ++   VS  + R  + T K  ++ 
Sbjct: 101 STNVKGKVDHIYIEPNQQVKEGQLIYELDPTQYKIALNQANVSADSARVALATAKGDIEI 160

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
               ++ L +  E+ + QL           +   +Y +        ++  R+    +   
Sbjct: 161 EEANHEALVQDLETSKSQL----------EAAKVDYKLQKKMLDRYVEQNRVVQNTITES 210

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           D++ +SS +                      ++++++   E  + K  +++         
Sbjct: 211 DIDKQSSTVD---------------------MARHNVLTLESQIKKKQVDI--------- 240

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                     +A L       E+ +              ++   +       + +P  G 
Sbjct: 241 --SRAKLAIHKAELAVETKQAELRQA-----------EEQIAKAQWDLNSTKVHAPTDGF 287

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPH----SKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           +            ++ Q +  ++P     +   Y+  +V  + I+++K G  A      +
Sbjct: 288 VTN-------FILREGQRV-SMMPRINMYTNEKYVLMRVNHQAIRNIKPGQPAE-----F 334

Query: 356 ADIREKK--FKAIIEKIDPIISQQDNNLQT 383
           +        F A +E I     +   NL  
Sbjct: 335 SSSVYPGKIFSATVEGIVEATGESQGNLLG 364


>gi|218513746|ref|ZP_03510586.1| probable protein secretion protein, HlyD family [Rhizobium etli
           8C-3]
          Length = 251

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 72/222 (32%), Gaps = 13/222 (5%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + F   +S     +K     + +I       ++     +A + + Q  L          A
Sbjct: 16  RDFQAALSQARADVKAAEAAITNIDAQIALQQSVIQQAKATVDASQASLDF--------A 67

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VS    + +       T    E     ++      E    A +   N +  +  + EQ  
Sbjct: 68  VSDAARSARLITNGAGTQSRAEQTQSARDQAAAAVERDRAALVAAENKVPVLRTEREQAA 127

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  +     E       I++ + GT+   +S     Y      LM +VP   +  +
Sbjct: 128 AQRDRAAAAAHQAELNLSYTDIVAAVDGTV-GARSIRVGQYVTSGTQLMAVVPLHAVYVV 186

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            A     Q+ +V+ G +  ++   + DI     K  ++ + P
Sbjct: 187 -ANFKETQLTYVRPGQSVEIKVDSFPDI---AIKGHVDSVSP 224



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/142 (8%), Positives = 40/142 (28%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  L   +D +    +   +  +K     I    + +    +     +   ++ +
Sbjct: 2   DVVKSGQVLARIDDRDFQAALSQARADVKAAEAAITNIDAQIALQQSVIQQAKATVDASQ 61

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             L   +     +   + N   +              +  + R      ++  +  +   
Sbjct: 62  ASLDFAVSDAARSARLITNGAGTQSRAEQTQSARDQAAAAVERDRAALVAAENKVPVLRT 121

Query: 196 QKDLTMMKNLFEKNAVSQNDLN 217
           +++    +      A  Q +LN
Sbjct: 122 EREQAAAQRDRAAAAAHQAELN 143


>gi|198282257|ref|YP_002218578.1| RND family efflux transporter MFP subunit [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218667857|ref|YP_002424620.1| efflux transporter, RND family, MFP subunit [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198246778|gb|ACH82371.1| efflux transporter, RND family, MFP subunit [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218520070|gb|ACK80656.1| efflux transporter, RND family, MFP subunit [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 360

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 97/270 (35%), Gaps = 24/270 (8%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           + +    ++  L      + ++   R   E+ +  L A+     +   ++    +   V 
Sbjct: 23  YQWRQGRLHTRLAAAANPVVTVSATRAQNESMAGELTAVGEIVPQQGAVLSP--QTGGVV 80

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS------RDL 266
           Q+        V K  L L  +       L+      D A +++    K  +        L
Sbjct: 81  QHIGFHSGATVQKGQLLLSLDPGALPGQLQAAKAEADLAQVDYQRAEKVFAIHGISTAAL 140

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           ++ +   +   +++T L+++     I +P +G ++  ++ +   Y     P++ I  + +
Sbjct: 141 DKARYGASVAQARVTALQESLADTQIRAPFSG-VLGLRTVNLGEYVHAGMPVVHI-ENLQ 198

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
             Y    V  + +Q V+ G    ++   +  I  + + A ++ +   +  Q+        
Sbjct: 199 TLYADFTVPQRDVQAVRAGGP--IQLDVHDGIILRHYSAKVQAVSSHVDAQNRA------ 250

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 ++  A  D  + L+ G    V+  
Sbjct: 251 ------VSVRALVDAPLGLKPGMFVRVVLQ 274



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 58/174 (33%), Gaps = 19/174 (10%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           ++ GEI+ +     +     G+++     +G+ + +G  LL+ +                
Sbjct: 59  TAVGEIVPQQGA-VLSPQTGGVVQHIGFHSGATVQKGQLLLSLDP--------------G 103

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L   +   K+  D     Y   EK F              +   + V    ++++  SL
Sbjct: 104 ALPGQLQAAKAEADLAQVDYQRAEKVFAIHGISTAALDKARYG--ASVAQARVTALQESL 161

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               T++R+ +   L L   +             +  ++ L+    V Q D+  
Sbjct: 162 AD--TQIRAPFSGVLGLRTVNLGEYVHAGMPVVHIENLQTLYADFTVPQRDVQA 213


>gi|85860681|ref|YP_462883.1| periplasmic component of efflux system [Syntrophus aciditrophicus
           SB]
 gi|85723772|gb|ABC78715.1| periplasmic component of efflux system [Syntrophus aciditrophicus
           SB]
          Length = 328

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/351 (13%), Positives = 100/351 (28%), Gaps = 78/351 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I     E G  + +G  L                         +D E+        + 
Sbjct: 53  GKITLLLTEEGQSVKKGDKL-----------------------AELDAEELGNQLRQYQA 89

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            V E  F   E                        +  S   ++ + R+           
Sbjct: 90  QVYESGFRLEEL-----------------------LAGSRPQEIEQARAA---------- 116

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A L   + D    + L+   A++  + +   R    +  +L+ +      +    
Sbjct: 117 VGQAKAELVKAKADFDRAEELYANGAIAAEERDALRRAYLVTVAQLKRSTEALSLVREGP 176

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                               +++  +       + L   E       + +P  G ++  +
Sbjct: 177 R-----------------REEIQAIRMRLQQAKAALAASENRLRDSYLFAPSNGVVLK-K 218

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +           P+ KI   +   +++  +   ++  VK G +A+V    Y        K
Sbjct: 219 TAELGETLATGVPVYKIGDVANP-WVKVYIKEDKLGLVKLGQSASVTTDSYPGKVY---K 274

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  I         N+QT+E    ++    ++  +   EL+ G PA+V  
Sbjct: 275 GAVTYIASEAEFTPKNVQTEEERVKLVFGLKVSVENPAGELKPGMPADVRI 325


>gi|41322923|ref|NP_958786.1| plectin isoform 1a [Homo sapiens]
 gi|40849944|gb|AAR95684.1| plectin 11 [Homo sapiens]
          Length = 4547

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 59/199 (29%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1343 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1402

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++    +    +  +++ K+    A   S  +    ++       
Sbjct: 1403 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR------- 1455

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1456 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1514

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1515 VELASRVKAEAEAAREKQR 1533



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2183 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2238

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2239 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2298

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2299 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2358

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2359 EETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2402



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++        +  ++ LR   + E   +     + +  E++    EE++     +  +T 
Sbjct: 1409 VDAQQQKRSIQEELQQLRQSSEAE---IQAKARQAEAAERSRLRIEEEIRVVRLQLEATE 1465

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +            L+    R       +   + ++  LR  +    +     +      
Sbjct: 1466 RQ-----RGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASR 1520

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQ 268
              ++ +  ++++   ++  ELR    E +  LR    E   +  +      +    +L+ 
Sbjct: 1521 VKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQS 1580

Query: 269  NQRTFADEMSKLT 281
             + +FA++ ++L 
Sbjct: 1581 KRASFAEKTAQLE 1593



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2232 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2291

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2292 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2351

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2352 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2411

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2412 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2442



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1640 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1699

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1700 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1756

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1757 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1808

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1809 LAEEAKRQRQLAEED 1823



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 6/148 (4%)

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +     ++            ++  L + R +       + ++      L    ++  + +
Sbjct: 1345 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1404

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                       D  QQ+R + +   +LR++   +        E  + + L     ++ + 
Sbjct: 1405 EEAA------VDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR 1458

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
              LE  +R       +L  L    E+  
Sbjct: 1459 LQLEATERQRGGAEGELQALRARAEEAE 1486



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 54/183 (29%), Gaps = 8/183 (4%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + F++     +E+     E+Q  +   +     + +      +   +         +  L
Sbjct: 1334 IKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKEL 1393

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-------QERIVYKSTLE 229
             +   E       A + + Q+  ++ + L +    S+ ++          ER   +   E
Sbjct: 1394 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1453

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +R    + +   R       E         +E      Q Q        ++    + + Q
Sbjct: 1454 IRVVRLQLEATERQRGGAEGELQA-LRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQ 1512

Query: 290  KTI 292
              +
Sbjct: 1513 AEV 1515



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2320 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2379

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL R+  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2380 AEAERLKL-RVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2437

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2438 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2477



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1551 RLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1610

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1611 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1670

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1671 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1726

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1727 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1759



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1456 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1509

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1510 KRQAEVE--LASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1567

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1568 ETAQRSA--EAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1625

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1626 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1657


>gi|47607492|ref|NP_000436.2| plectin isoform 1c [Homo sapiens]
 gi|40849930|gb|AAR95677.1| plectin 1 [Homo sapiens]
          Length = 4574

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 59/199 (29%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1370 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1429

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++    +    +  +++ K+    A   S  +    ++       
Sbjct: 1430 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR------- 1482

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1483 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1541

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1542 VELASRVKAEAEAAREKQR 1560



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2210 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2265

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2266 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2326 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2385

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2386 EETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2429



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++        +  ++ LR   + E   +     + +  E++    EE++     +  +T 
Sbjct: 1436 VDAQQQKRSIQEELQQLRQSSEAE---IQAKARQAEAAERSRLRIEEEIRVVRLQLEATE 1492

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +            L+    R       +   + ++  LR  +    +     +      
Sbjct: 1493 RQ-----RGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASR 1547

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQ 268
              ++ +  ++++   ++  ELR    E +  LR    E   +  +      +    +L+ 
Sbjct: 1548 VKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQS 1607

Query: 269  NQRTFADEMSKLT 281
             + +FA++ ++L 
Sbjct: 1608 KRASFAEKTAQLE 1620



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2259 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2318

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2319 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2378

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2379 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2438

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2439 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2469



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1667 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1726

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1727 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1783

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1784 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1835

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1836 LAEEAKRQRQLAEED 1850



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 6/148 (4%)

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +     ++            ++  L + R +       + ++      L    ++  + +
Sbjct: 1372 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1431

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                       D  QQ+R + +   +LR++   +        E  + + L     ++ + 
Sbjct: 1432 EEAA------VDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR 1485

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
              LE  +R       +L  L    E+  
Sbjct: 1486 LQLEATERQRGGAEGELQALRARAEEAE 1513



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 54/183 (29%), Gaps = 8/183 (4%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + F++     +E+     E+Q  +   +     + +      +   +         +  L
Sbjct: 1361 IKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKEL 1420

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-------QERIVYKSTLE 229
             +   E       A + + Q+  ++ + L +    S+ ++          ER   +   E
Sbjct: 1421 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1480

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +R    + +   R       E         +E      Q Q        ++    + + Q
Sbjct: 1481 IRVVRLQLEATERQRGGAEGELQA-LRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQ 1539

Query: 290  KTI 292
              +
Sbjct: 1540 AEV 1542



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2347 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2406

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL R+  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2407 AEAERLKL-RVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2464

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2465 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2504



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1578 RLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1637

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1638 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1697

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1698 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1753

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1754 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1786



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1483 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1536

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1537 KRQAEVE--LASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1594

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1595 ETAQRSA--EAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1652

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1653 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1684


>gi|297580754|ref|ZP_06942680.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297535170|gb|EFH74005.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 366

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 20/183 (10%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLE--QNQRTFADEMSKLTILEKTREQKTI 292
            + +     +     E N   A   K +  ++          D  S L+ +++  +   +
Sbjct: 120 AQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQV 179

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +         ++     P+  I+       I A V+ + IQHV+    A +RF
Sbjct: 180 RAPFDGVVETLPI-EKGDFVGIGDPVASII-DLHKLVIEADVSERHIQHVQLEQAARIRF 237

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                I   + +  +  I  + S   N       + + +++ +   +     +  G  AE
Sbjct: 238 -----IDGTQTQGKVRYISRLSSPATNT------FAIEVEVDNPQQA-----IPAGVSAE 281

Query: 413 VLF 415
           V  
Sbjct: 282 VEL 284



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I + ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIELYGRTAPDRQAK-IGAEIAGRIAEVKIAKGQVVTKNQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 127 AQLKVRQ----QEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 183 FDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLEQAA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGTQTQGKVRYISRL 253


>gi|255322999|ref|ZP_05364135.1| secretion protein, HlyD family [Campylobacter showae RM3277]
 gi|255299861|gb|EET79142.1| secretion protein, HlyD family [Campylobacter showae RM3277]
          Length = 320

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 79/225 (35%), Gaps = 21/225 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E A     E L                  +S++   L    T  R   + R+  E K 
Sbjct: 55  VKEGAVVQESEPLFALESAEALANLDAAKANVSALEAELADLSTGKRPEEIERIGAELKQ 114

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  +A L   + +    K+L  KNAVSQ + +  +    ++             +   +N
Sbjct: 115 A--KAALWIAEANYERAKSLLAKNAVSQKEFDAAKAEFDRANA-----------LASELN 161

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                ANL         S  +   +       +         EQ  +L+P +G +     
Sbjct: 162 AALKIANLPAR------SEQITSLKAKIQAAKANERAARWRLEQTAVLAPKSGLVEDIFY 215

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            +   + Q SQP++ ++P S+   IR  V    +  +++G  A +
Sbjct: 216 KT-GEFVQSSQPVLSLLPPSE-VKIRFFVPAGALPSLREGQKARI 258


>gi|194433106|ref|ZP_03065388.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Shigella dysenteriae 1012]
 gi|194418603|gb|EDX34690.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Shigella dysenteriae 1012]
 gi|320178506|gb|EFW53471.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor protein YbhG [Shigella boydii ATCC 9905]
 gi|332091017|gb|EGI96107.1| hlyD family secretion family protein [Shigella dysenteriae 155-74]
          Length = 331

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+ +P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLTAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKADVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLTAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|54296682|ref|YP_123051.1| hypothetical protein lpp0713 [Legionella pneumophila str. Paris]
 gi|53750467|emb|CAH11861.1| hypothetical protein lpp0713 [Legionella pneumophila str. Paris]
          Length = 281

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 71/221 (32%), Gaps = 18/221 (8%)

Query: 206 FEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEI 262
            +K  V ++ D +     +  +  +L + I  QKN  R     E   +          + 
Sbjct: 68  VKKGQVLARLDKDTFIANLEMAKAQLEQAIANQKNASRTYKRREQLVDDGAVSKALFDDA 127

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
               + +    +   + L   + +     I +P  GTI+  +          ++P+  + 
Sbjct: 128 VAMKDSSSAEVSVAKANLEKAQISLNDTEIHAPTHGTILT-RIQEPGAIVNVAEPVYTLA 186

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS-----QQ 377
                 ++R  +    +  +  G  A V   +     EK +K  I  I P         +
Sbjct: 187 -IDNPVWVRTYIDEPFLGRIYPGQDALV---YTDSNPEKPYKGHIGFISPQAEFTPKIVE 242

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
              L+T   Y + + I           LR G P  V    K
Sbjct: 243 TTQLRTDLVYRIRVVIDQPDNG-----LRQGMPVTVKIHLK 278



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 32/106 (30%), Gaps = 3/106 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFL 120
           SG I    V+ G+ + +G  L   +       +++ K  ++       +        + L
Sbjct: 54  SGRILSMDVDEGAHVKKGQVLARLDKDTFIANLEMAKAQLEQAIANQKNASRTYKRREQL 113

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            +   V +  F+           +     + +    IS     +  
Sbjct: 114 VDDGAVSKALFDDAVAMKDSSSAEVSVAKANLEKAQISLNDTEIHA 159


>gi|88811510|ref|ZP_01126765.1| Secretion protein HlyD [Nitrococcus mobilis Nb-231]
 gi|88791399|gb|EAR22511.1| Secretion protein HlyD [Nitrococcus mobilis Nb-231]
          Length = 367

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 70/230 (30%), Gaps = 29/230 (12%)

Query: 209 NAVSQNDLNQQERIVYK---STLELRENIHEQKNMLR--HINELYDEANLEFANYLKEIS 263
             V +      ER+        L+   +  +   +     + +L  E N           
Sbjct: 77  GKVEEIRFKSGERVAKGNILVQLDAAVDRADLDGLKADMRLAQLQLERNARLLPRRAISQ 136

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
              ++ +  +    +K+   E    +KTI +P AG  +  +  +   Y      +++I  
Sbjct: 137 SAYDETKTRYESAKAKVASQEALINKKTIRAPFAGL-LGIREVNLGQYLSPGTKIVQIQ- 194

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                ++   +  +    +++G T  V    Y +     F   I  +D  ++    ++Q 
Sbjct: 195 QLTPIFVDYTLPERHFNQLQEGQTVQVTVSAYPNET---FVGRITAVDAAVNPATRSIQ- 250

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEV--------LFTAKNTTLAQE 425
                     T     + +  LR G  AEV               T    
Sbjct: 251 ----------TRATLQNPDGRLRPGMFAEVTTEQGAPRQVLTIPRTAVSY 290



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 11/119 (9%), Positives = 39/119 (32%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++ + ++G ++ +G  L+  +       +D  K  ++  +  ++     L       
Sbjct: 77  GKVEEIRFKSGERVAKGNILVQLDAAVDRADLDGLKADMRLAQLQLERNARLLPRRAISQ 136

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              ++     E        +      K      + +    ++ L +  S     + ++ 
Sbjct: 137 SAYDETKTRYESAKAKVASQEALINKKTIRAPFAGLLGIREVNLGQYLSPGTKIVQIQQ 195


>gi|329113929|ref|ZP_08242696.1| Multidrug resistance protein A-like protein [Acetobacter pomorum
           DM001]
 gi|326696676|gb|EGE48350.1| Multidrug resistance protein A-like protein [Acetobacter pomorum
           DM001]
          Length = 358

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 103/313 (32%), Gaps = 18/313 (5%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            ++   +  +      R ++++    +      ++ +        +L++    + +   +
Sbjct: 40  AYVTADFPTVAPKVSGRIDRVIAQDNQLVHAGEELAHIEDDDYRAALEVAKGNVLAAQGD 99

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKN--LFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
             +LE +     A+++  +  +   +   +F +   ++               +  E   
Sbjct: 100 VANLEAELGRQDAVIAQARAAVLADQAALMFARQNATRYRNLSSGGAGTIEQKQSSEAQE 159

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           ++       ++   +A +     LK     L++ +             E      TI +P
Sbjct: 160 KEAAAAIARDQAGVDAAIRQVAVLK---AQLQRARGVLLRMQGDEKQAELNLSYCTIPAP 216

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +V  +     NY      ++ +VP  +   + A     Q+  V+ G +ATV    +
Sbjct: 217 MDG-VVGERGVRIGNYVHPGTGILAVVPVHEAYVL-ANFQETQLTKVQTGQSATVWVDTF 274

Query: 356 ADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRN---- 407
                   KA ++ + P      +    +  T  + +V+ +I      D +  L      
Sbjct: 275 PGH---PLKAHVDSLAPATGVAFAPIQPDNATGNFTKVVQRIPVKLTFDPDQPLAARVRV 331

Query: 408 GFPAEVLFTAKNT 420
           G   EV     + 
Sbjct: 332 GMSVEVNIDTASK 344



 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 19/176 (10%), Positives = 61/176 (34%), Gaps = 18/176 (10%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEK 114
            +    SG I +   ++   +  G  L   ED +    +++ K ++   +    +++ E 
Sbjct: 48  TVAPKVSGRIDRVIAQDNQLVHAGEELAHIEDDDYRAALEVAKGNVLAAQGDVANLEAEL 107

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
              D +  +         +R   L D      +  +        ++       + + +S 
Sbjct: 108 GRQDAVIAQ---------ARAAVLADQAALMFARQN---ATRYRNLSSGGAGTIEQKQSS 155

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
                +     +  +A + +  + + ++K   ++   ++  L + +    ++ L L
Sbjct: 156 EAQEKEAAAAIARDQAGVDAAIRQVAVLKAQLQR---ARGVLLRMQGDEKQAELNL 208


>gi|302186069|ref|ZP_07262742.1| secretion protein HlyD [Pseudomonas syringae pv. syringae 642]
          Length = 388

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 71/188 (37%), Gaps = 7/188 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V+ G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVKEGQQVKAGDLLATLDDRSIRAALEQARAQL 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +D   + LD    +    E     +       L +     +K     I++    
Sbjct: 114 AQSKAQLDV--AQLDLKRYRQLTQENGISRQTFDQQQALVRQLEATAKGNEASINASQVQ 171

Query: 164 LKMKLTRMRSIYLNRLDLEN--KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           L    T++RS    R+ + N  + + LR   ++    +T +  +  + ++ Q  L   + 
Sbjct: 172 LS--YTQIRSPVTGRVGIRNVDEGNFLRVSDAAGLFSVTQIDPIAVEFSLPQQMLPTLQG 229

Query: 222 IVYKSTLE 229
           ++ +    
Sbjct: 230 LIAERNAA 237



 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 75/252 (29%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L ++       +   + +       +R  + + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVKEG----QQVKAGDLLATLDDRSIRAALEQARAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTQENGISRQTFDQQQALVRQLEATAKGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P     + +   A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDAAGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAERNAA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TV+                 +  ID  +S     ++               F +   +L 
Sbjct: 238 TVKAYQGDGAANGLLLGDGTLSLIDNQVSASTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|87124843|ref|ZP_01080691.1| possible membrane fusion protein [Synechococcus sp. RS9917]
 gi|86167722|gb|EAQ68981.1| possible membrane fusion protein [Synechococcus sp. RS9917]
          Length = 391

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 78/216 (36%), Gaps = 26/216 (12%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  +++ + +  ++  + +    +       +N+  + +     + L+        ++  
Sbjct: 126 RERIDELQALERQARADYQGKRADY-----LLNKRLENSGALSTSDLEGFRYSYLSSKAA 180

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--------IVPH 324
            A    ++   +   E+  I +P +G I   +      +   +             IV  
Sbjct: 181 LAAARERIQQRQVEGEELLIRAPFSGVITE-RFAEPGAFVTPTTTASATAGATSSSIVEL 239

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           S+   + AKV    I  +  G  ATVR   + D R   F A +  I P   + DN +  +
Sbjct: 240 SQGLEVAAKVPESDIGRILIGQDATVRVDAFPDQR---FAARVRDIAPRAEKVDNVVSFE 296

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                     +L+  +   +LR G  A+V F   +T
Sbjct: 297 V---------ELSLLNPPPKLRIGMTADVDFQTGST 323



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 68/185 (36%), Gaps = 24/185 (12%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSI------------------LLPIEISVSSSG 48
             LKR    SL  +  L ++G  GL  WS+                     +   +++SG
Sbjct: 24  SGLKRRRRRSLGLIAGLVLVG-GGLAFWSVGPGRNRSRDLSAYTVKAERGSLPGVITASG 82

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
           E+      V +     G ++   VE G+ + +G  L   +  +  + ID  ++     + 
Sbjct: 83  ELEAI-RRVNVSPKRQGRLESLDVEEGATVEKGQVLARMDSGDYRERID--ELQALERQA 139

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             D +    D+L NK   LE +       L  F   Y S+ + +         R ++ + 
Sbjct: 140 RADYQGKRADYLLNKR--LENSGALSTSDLEGFRYSYLSSKAALAAARERIQQRQVEGEE 197

Query: 169 TRMRS 173
             +R+
Sbjct: 198 LLIRA 202


>gi|306840605|ref|ZP_07473359.1| secretion protein HlyD family protein [Brucella sp. BO2]
 gi|306289405|gb|EFM60637.1| secretion protein HlyD family protein [Brucella sp. BO2]
          Length = 353

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 92/279 (32%), Gaps = 21/279 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E   V
Sbjct: 81  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALE---V 137

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++ ++ + + ++ +     + +       +       D+A    A   +++   +   + 
Sbjct: 138 AKANMVRVDALLPRGVT-TQSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 196

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + + +   +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 197 LNADLHNAEAAVALAKIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVPAVK-- 253

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 254 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 310

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++     ++I+      +   L  G    V     +
Sbjct: 311 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAS 349


>gi|299132317|ref|ZP_07025512.1| secretion protein HlyD family protein [Afipia sp. 1NLS2]
 gi|298592454|gb|EFI52654.1| secretion protein HlyD family protein [Afipia sp. 1NLS2]
          Length = 320

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/300 (10%), Positives = 87/300 (29%), Gaps = 33/300 (11%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +      +   +  R  +L   +G   S    V       + +SL       R      
Sbjct: 37  RIEADEIDIATKYAGRIAELGADIGDLVSPGQVVAKMDTQDIQQSLSKSEATARQAQKAI 96

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            + +      +      ++++   + L +    ++  ++Q+++ +  +   L       K
Sbjct: 97  DEAQANLVQQQTQQRLSEQEIKRTRTLLKSGWATKELMDQRQQQLDAANAGL----TAAK 152

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             +         A  + A Y  +I                             +++P  G
Sbjct: 153 ARVLQTEHALSAAEHDAAFYRVQIG-------------------------DNALIAPKRG 187

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            I Y +  +          +  ++      Y+   +   +   VK G  A +    Y D 
Sbjct: 188 RIQY-RLANIGEVLPAGGKVFTML-DFSYVYMDIYLPTAEAGKVKVGDDARIVLDAYPDH 245

Query: 359 REKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 + +  +     +  +  + + +  + + ++I       ++  +R+G P      
Sbjct: 246 PIPAKVSFVANLSQFTPKTVETKSERDKLMFRIRVRIDQDRLLAHSDSIRSGLPGVAYVR 305



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/128 (10%), Positives = 38/128 (29%), Gaps = 2/128 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +   + G  +  G  +   +  +    +   + + +  +  ID  ++ L     + 
Sbjct: 51  GRIAELGADIGDLVSPGQVVAKMDTQDIQQSLSKSEATARQAQKAIDEAQANLVQQQTQQ 110

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + E+  +     L            +     + +    L     R+          E+ 
Sbjct: 111 RLSEQEIKRTRTLLKSGWATKELMDQR--QQQLDAANAGLTAAKARVLQTEHALSAAEHD 168

Query: 185 SSLLRALL 192
           ++  R  +
Sbjct: 169 AAFYRVQI 176


>gi|240851263|ref|YP_002972666.1| secretion protein, HlyD family [Bartonella grahamii as4aup]
 gi|240268386|gb|ACS51974.1| secretion protein, HlyD family [Bartonella grahamii as4aup]
          Length = 335

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 75/201 (37%), Gaps = 4/201 (1%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           + +   +    +  LS I  + LI W+  L P   ++  +     + NV  + S  SG+I
Sbjct: 1   MIKALRSKATIVAFLSGITGVLLILWAWRLPPFVNNIQITDNASIKGNVTLVSSQISGVI 60

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V++  ++ +G  L   +D      +   +  + +    + + +     L  + +  
Sbjct: 61  ARIYVQDYQRVEKGMLLFELDDSLFRQQLARAQAVLDSKNAKLASIELQAQILQGEVNAA 120

Query: 128 EKAFESREE---QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           E            + D         +   +  +S +  +L+ K    + + L +  L+++
Sbjct: 121 EAELARSRAFSNVVPDSKKLGFGDAAISVSRPLSQLLAALETKRQLQKQLNLEKQSLQSE 180

Query: 185 SSLLRALLSSHQKDLTMMKNL 205
            S  +  +   + +L   K L
Sbjct: 181 VSGAKVSVELAKLNLDHTKIL 201



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 88/278 (31%), Gaps = 31/278 (11%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F    S   + L      + S       +E ++ +L+  +++ + +      L    A 
Sbjct: 77  LFELDDSLFRQQLARAQAVLDSKNAKLASIELQAQILQGEVNAAEAE------LARSRAF 130

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S    + ++     + + +   + +    L    +L  + NLE  +   E+S        
Sbjct: 131 SNVVPDSKKLGFGDAAISVSRPLSQLLAALETKRQLQKQLNLEKQSLQSEVSG------A 184

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             + E++KL       +   ILSP  G I          Y      L+ ++  S   +I 
Sbjct: 185 KVSVELAKLN-----LDHTKILSPRTGYI-GLVGARVGQYVMPGTQLVSVI--SDDIWII 236

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY---- 387
           A     Q+  ++ G           +   KK    + +  P    + + L+T        
Sbjct: 237 ANYKETQLSQMRVGQPVVFSVDALNN---KKLTGRVVRFAPATGSEFSLLKTDTTIGNFI 293

Query: 388 ----EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                + ++I+     +   +L  G             
Sbjct: 294 KIAQRISVRISLDPGQEGIEKLIPGMSVVTYVDTSQRV 331


>gi|159186252|ref|NP_356025.2| nolF secretion protein [Agrobacterium tumefaciens str. C58]
 gi|159141386|gb|AAK88810.2| nolF secretion protein [Agrobacterium tumefaciens str. C58]
          Length = 385

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 66/213 (30%), Gaps = 14/213 (6%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLN------QQERIVYKSTL 228
             RL +  +   +  +L   ++   +++    +  AV   D+       + +  +     
Sbjct: 71  AERLSISGELQPVNRVLIRAREAGKILEMNVREGQAVRAGDMLVRFETDELQSTLLLRQS 130

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           +      E    ++ +      A    A    L +   D+           S++ I    
Sbjct: 131 DRDAAEAELMLAMQALARTEQLAAKNIASTEQLDKAKSDVVVKTTRVQSLSSQVDIARLA 190

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                I +P  GT+   +   +         L+ +V  +     +  V  + I  V +G 
Sbjct: 191 LRNAEIRAPFDGTVTR-RVAETGARIGADGELLTLV-DTSELEAKVLVATRDIPRVARGQ 248

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           TA +     A       K  +E+I P+      
Sbjct: 249 TAELEIDGLAGQI---VKGTVERISPVAEDGTR 278



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 82/228 (35%), Gaps = 7/228 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+   +S SGE+    N V I++  +G I +  V  G  +  G  L+ FE  E    + L
Sbjct: 69  PMAERLSISGELQPV-NRVLIRAREAGKILEMNVREGQAVRAGDMLVRFETDELQSTLLL 127

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           ++         +     AL     + + L     +  EQL           ++V +    
Sbjct: 128 RQSDRDAAEAELMLAMQAL----ARTEQLAAKNIASTEQLDKAKSDVVVKTTRVQSLSSQ 183

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                L ++   +R+ +   +      +  R         L     L  K  V+  D+ +
Sbjct: 184 VDIARLALRNAEIRAPFDGTVTRRVAETGARIGADGELLTLVDTSELEAKVLVATRDIPR 243

Query: 219 QERIVYKSTLELRENIHEQ-KNMLRHINELYDEANLEFANYLKEISRD 265
             R    + LE+     +  K  +  I+ + ++     A YL+  +RD
Sbjct: 244 VAR-GQTAELEIDGLAGQIVKGTVERISPVAEDGTRVVAVYLRLANRD 290


>gi|149026413|ref|ZP_01836551.1| hypothetical protein CGSSp23BS72_09270 [Streptococcus pneumoniae
           SP23-BS72]
 gi|147929296|gb|EDK80296.1| hypothetical protein CGSSp23BS72_09270 [Streptococcus pneumoniae
           SP23-BS72]
          Length = 335

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 87/290 (30%), Gaps = 12/290 (4%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +       ++ S      I+ V + +        +I  NR  L   +     L       
Sbjct: 45  VSNQANLANSSSSAIEQEITKVQQQIGEYQELRDAIINNRARLPTSNPHQSILNRYLVAS 104

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               +   E+  +SQ  +NQ    +  S   L+       ++  + N L  +  +    +
Sbjct: 105 QGQTQGTAEEPFLSQ--INQSIAGLESSIASLKIQQAGIGSVATYNNSLAAKIEVLRTQF 162

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L+  S+     +    +   +L    +  E  T+ +P  G +  N  F   N       +
Sbjct: 163 LQTASQQQLTVENQLTELKVQLDQATQRLENNTLTAPSKGIVHLNSEFEGKNRIPTGTEI 222

Query: 319 MKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            +I P    ++   I   V    +  + KG T  ++     +         ++ ID   +
Sbjct: 223 AQIFPIITDTREVLITYYVASDYLPLLDKGQTVRLKLEKIGN-HGITIIGQLQTIDQTPT 281

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           + +     +      L   D         ++ G    V       T    
Sbjct: 282 RTEQGNLFKLTALAKLSNEDSKL------IQYGLQGRVTSVTAKKTYFDY 325


>gi|330938998|gb|EGH42470.1| secretion protein HlyD [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 388

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 4/188 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V+ G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVKEGQQVKAGDLLATLDDRSIRAALEQARAQL 113

Query: 104 KNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +  +D  +  L     L  +  +  + F+ ++  +           + +    +   
Sbjct: 114 AQSKAQLDVAQLDLKRYRQLTQENGISRQTFDQQQALVRQLEATAKGNEASINASQVQLS 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y  ++  +T    I         + S    L S  Q D   ++    +  +        E
Sbjct: 174 YTQIRSPVTGRVGIRNVDEGNFLRVSDAAGLFSVTQIDPIAVEFSLPQQMLPSLQGLIAE 233

Query: 221 RIVYKSTL 228
           R       
Sbjct: 234 RNAATVKA 241



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 76/252 (30%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L ++       +   + +       +R  + + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVKEG----QQVKAGDLLATLDDRSIRAALEQARAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTQENGISRQTFDQQQALVRQLEATAKGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P     + +   A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDAAGLFSVTQIDPIAVEFSLPQQMLPSLQGLIAERNAA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TV+              +  +  ID  +S     ++               F +   +L 
Sbjct: 238 TVKAYQGDGAANGLLLGEGTLSLIDNQVSASTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|294341536|emb|CAZ89953.1| putative Secretion protein HlyD [Thiomonas sp. 3As]
          Length = 394

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 67/211 (31%), Gaps = 24/211 (11%)

Query: 225 KSTLELRENIHEQKNML--RHINELYDEANLEFANYLKEI----SRDLEQNQRTFADEMS 278
               +L+  + + +  L    I    DEA L+     + +      ++   Q        
Sbjct: 111 AQLAQLQAQVGQLQAQLNLAQITLARDEAQLKVQAISQAVVDTDRANVTSVQAQLKALAE 170

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           ++   +    Q T+ +P  G ++  +  +   Y      ++ +        I   V   Q
Sbjct: 171 QINAQKAVLAQATVTAPFTG-VLGIRQVNLGQYLAPGTAVVTLQALD-PMDIDFTVPQNQ 228

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  V  G  A +          K F+A +  ++P I+    NL       V  +I     
Sbjct: 229 IDLVHVGMKAELTTNA---APGKTFEAKVIAVEPQINTATRNLT------VRARIP---- 275

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
            +   EL  G  A +  T         I  P
Sbjct: 276 -NPKGELLPGVFATIRLTDGE--PRNYITLP 303



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/101 (10%), Positives = 34/101 (33%), Gaps = 2/101 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLNN 122
           G++      +G ++  G  L    D      +   +  +  L+  ++  +  L  D    
Sbjct: 82  GVVTAIHFRSGEKVRAGQVLAQINDAPQRAQLAQLQAQVGQLQAQLNLAQITLARDEAQL 141

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           K   + +A    +   +  +       ++  N   + + ++
Sbjct: 142 KVQAISQAVVDTDRANVTSVQAQLKALAEQINAQKAVLAQA 182


>gi|240137646|ref|YP_002962117.1| hypothetical protein MexAM1_META1p0942 [Methylobacterium extorquens
           AM1]
 gi|240007614|gb|ACS38840.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 584

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 50/388 (12%), Positives = 123/388 (31%), Gaps = 25/388 (6%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEI 59
           M      +   +    L R++ + +  ++  LI  S+L P+      S   +    V  +
Sbjct: 1   MSQPTLTSAPEHRHGRLVRVSSVGLASVLAILIGTSVLPPL--VADQSDRAVVNAPVTLL 58

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-SIKNLRCHIDTEKSALD 118
            +P +G I    V  G ++ +G+ +    +        ++    +  LR      ++   
Sbjct: 59  TAPIAGDIGAIPVTAGDKVERGSLVAQITNDRLDRATAIQLAGRVSELRERALAAENKRT 118

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +++A   +  Q++  L               +S      +   ++  +  + 
Sbjct: 119 SNEAYLSAIDRAIRDQSAQMMQVLRSQVEELKAKIASANASGEEKRVLMERQVGMVARDV 178

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
              +   S  +A  ++ Q+       L +K       L    R ++    +   ++ +  
Sbjct: 179 ASPDMVKSTTQAFNAAIQEKKAAEAKLNQK----TVQLEGLARGLF--LGDELRSLADLS 232

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                I        +E     KE+   +   Q     E  +L           I +   G
Sbjct: 233 EKQLSITYDTQRLAIE----EKELKAAMVDQQALLKREDQRL----DRLTTSEIKASAKG 284

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +    + ++  +      L  +V   +   + A  + +Q Q+++ G   T+     +  
Sbjct: 285 VVYNVNA-TTGRHVGAGDSLASVVDCERSFVV-AIFSYRQGQNLQVGSAVTI-----SGG 337

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEY 386
                K I+ +I P  S   +      +
Sbjct: 338 SVGPRKGIVTEILPKTSDTVDATYAVPF 365


>gi|240145004|ref|ZP_04743605.1| auxiliary transport protein, membrane fusion protein [Roseburia
           intestinalis L1-82]
 gi|257202951|gb|EEV01236.1| auxiliary transport protein, membrane fusion protein [Roseburia
           intestinalis L1-82]
          Length = 472

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 97/357 (27%), Gaps = 80/357 (22%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V+ G  + +G  L T +     D                                
Sbjct: 83  ITAVNVQVGDIVKEGDVLCTLDSSTIQD-------------------------------- 110

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                     Q+ D       T +       +    S +   T  R+    +  L     
Sbjct: 111 ----------QIADLEKNMSDTNA-------TDSINSQQTAETVSRAKEDQQTQLAAAQK 153

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +     ++     M     +K+      L   ++ V  +  + ++ +      +     
Sbjct: 154 AIDDAKDAYNAQSIMWDKSEDKSDAEFQSLLAAQKAVTTAEEDYQKVLETTNRTIEDAQR 213

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                             +L++ + + +    KLT L++  E   I +P  G +      
Sbjct: 214 AV----------------ELDKYKGSDSSSKDKLTDLKEQLEDCNITAPCGGVVTAVNV- 256

Query: 307 SSSNY-AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           S  +  A    PL+ I   +    + A V    I  +++G  ATV      D        
Sbjct: 257 SVGDVNADSKTPLVTI-EDTSSLKMVATVEEADILKIEEGMKATVTADAMGDET---ING 312

Query: 366 IIEKIDPIISQQD--NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++  +  Q    +   T   Y V + +        N EL  G   +     K  
Sbjct: 313 TVTRVVRVKGQSTGSDGQTTSGGYSVEISLD-------NKELLVGMEVKAKVMIKEK 362


>gi|218507360|ref|ZP_03505238.1| protein secretion protein, HlyD family [Rhizobium etli Brasil 5]
          Length = 75

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 31/67 (46%)

Query: 10 KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
          KR+    +  +  LSI  + G+  W+    +  +V   G ++ + +V +I+ P  GI+ K
Sbjct: 9  KRSLNRHVAVVGALSIALVCGIGGWAATTELSSAVIGEGVVVVDGDVKKIQHPTGGIVSK 68

Query: 70 FQVENGS 76
            V    
Sbjct: 69 LLVAEND 75


>gi|24216436|ref|NP_713917.1| heavy metal efflux pump [Leptospira interrogans serovar Lai str.
           56601]
 gi|24197734|gb|AAN50935.1| heavy metal efflux pump [Leptospira interrogans serovar Lai str.
           56601]
          Length = 497

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 139/383 (36%), Gaps = 54/383 (14%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +V +SG I   + V ++ S  SG I+K   + G ++ Q   L   E +     +  +
Sbjct: 87  ITPTVEASGMIDFIEKV-DVYSKVSGRIEKVYFKEGEEVSQNQRLFKMETLPLELELLKQ 145

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++++ +  +   K    +L  K +VL K  E  +   +    K     +K    GI  
Sbjct: 146 ESTLESSKSQVKLAKE--KYLKAKNNVLAKIQEYEKSLSVLEKSKQEYEKAKNSFAGIEE 203

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +Y +         +  LN    E    +    +      LT  K++   N          
Sbjct: 204 IYNAGGFTKEEFENAKLNLNSKETSYQIAEKDVEIRSIGLTD-KDILRNNY--------- 253

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                    +L +   E+  +L  IN L ++A  E A             +  +    ++
Sbjct: 254 ---------KLPQTKEERTTILEEINSLIEKAEWEVA-------------EGVYKSHEAQ 291

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ---QSQPLMKIVPHSKLTYIRAKVTP 336
           +   +   ++  + SP+ G I   Q  +           Q ++ ++   ++  +   +  
Sbjct: 292 VNSTKMMLKESLVFSPLTGVISK-QFKTEGEILSGSGPGQHVVSVINVKQVYAV-LNIPE 349

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
            +  ++KKG    V F      + ++F+ +++ + PI+ Q+ +           ++I  L
Sbjct: 350 SESINLKKGMK--VSFLA-DVYKGQQFQGMVQLLSPIVDQKSHT----------VEIKAL 396

Query: 397 AFSDNNIELRNGFPAEVLFTAKN 419
             + N + L+ G       T   
Sbjct: 397 VDNKNKL-LKPGMFIRANITTGQ 418


>gi|86148143|ref|ZP_01066442.1| Membrane-fusion protein [Vibrio sp. MED222]
 gi|85834060|gb|EAQ52219.1| Membrane-fusion protein [Vibrio sp. MED222]
          Length = 374

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 67/207 (32%), Gaps = 21/207 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             + Q    + K  LE++    E+ + L  + +   +A         +        + + 
Sbjct: 102 VKVGQAIAQIDKGDLEIQ---LERASALYRLKQKEFKAAQSLKKRGLQGEIAYTTAEASL 158

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +  +     E   +   I SP +G +         ++     P+  ++       I A 
Sbjct: 159 TEAKAMKRNAELALKNTVITSPFSGVVQDLMV-EIGDFVGVGDPVAGVI-DLDPLVIEAD 216

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V+ + IQH+    +A VR         ++ +  +  +  I S   N              
Sbjct: 217 VSERHIQHLLVNQSALVRLLG-----REEAEGRLRYVSRISSASTNTF-----------P 260

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
            ++   +++  L  G  AEV    +  
Sbjct: 261 IEIEIDNSDGLLPAGVSAEVTLNLETR 287


>gi|330975766|gb|EGH75832.1| secretion protein HlyD [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 388

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 71/188 (37%), Gaps = 7/188 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V+ G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVKEGQQVKAGDLLATLDDRSIRAALEQARAQL 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +D   + LD    +    E     +       L +     +K     I++    
Sbjct: 114 AQSKAQLDV--AQLDLKRYRQLTQENGISRQTFDQQQALVRQLEATAKGNEASINASQVQ 171

Query: 164 LKMKLTRMRSIYLNRLDLEN--KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           L    T++RS    R+ + N  + + LR   ++    +T +  +  + ++ Q  L   + 
Sbjct: 172 LS--YTQIRSPVTGRVGIRNVDEGNFLRVSDAAGLFSVTQIDPIAVEFSLPQQMLPTLQG 229

Query: 222 IVYKSTLE 229
           ++ +    
Sbjct: 230 LIAERNAA 237



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 76/252 (30%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L ++       +   + +       +R  + + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVKEG----QQVKAGDLLATLDDRSIRAALEQARAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTQENGISRQTFDQQQALVRQLEATAKGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P     + +   A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDAAGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAERNAA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TV+              +  +  ID  +S     ++               F +   +L 
Sbjct: 238 TVKAYQGDGAANGLLLGEGTLSLIDNQVSAGTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|242238339|ref|YP_002986520.1| efflux pump membrane protein [Dickeya dadantii Ech703]
 gi|242130396|gb|ACS84698.1| efflux pump membrane protein [Dickeya dadantii Ech703]
          Length = 391

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 84/271 (30%), Gaps = 32/271 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + ++  + +N    +    + +  L     DL   + L   NA+  
Sbjct: 99  EQTFERSQTALANSVRQVHQLIINGRQYKANIDVQQVALDRAISDLNRREALGRANAIGH 158

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            DL      V  +   L     +       I +   E          ++           
Sbjct: 159 EDLQHARDSVTSARASLEAARQQYAANQAMILDTPLEKQPTVQQAAADVRDAWL------ 212

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                         ++  I+SP+ G +   +S         S  LM +VP +   ++ A 
Sbjct: 213 ------------ALKRTHIVSPVEGYVSR-RSVQLGARITTSSSLMAVVPANN-LWVDAN 258

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ H++ G  AT+    Y D     +K  +  +D          P  +   N ++ 
Sbjct: 259 FKETQLTHMRIGQPATITSDLYGDDV--VYKGRVVGLDMGTGSAFSLLPAQNATGNWIKV 316

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
            +   V +++     +++ + +      +V 
Sbjct: 317 VQRLPVRIELDPKQLAEHPLRIGLSMLVKVD 347



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 65/187 (34%), Gaps = 10/187 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N V+I S  SG + +  V+N   + +G  L+  +  +     +  + ++ N    + 
Sbjct: 58  VAGNQVQIMSQVSGSVTQVNVDNTDFVRKGDVLVELDPTDAEQTFERSQTALANSVRQVH 117

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                        DV + A +     L   + LG+ ++   +   +   SV  +      
Sbjct: 118 QLIINGRQYKANIDVQQVALDRAISDLNRREALGRANAIGHEDLQHARDSVTSARASLEA 177

Query: 170 RMRSIYLNRLD-----LENKSSLLRALLSSHQKDLTMMKNLF---EKNAVSQNDLNQQER 221
             +    N+       LE + ++ +A        L + +       +  VS+  +    R
Sbjct: 178 ARQQYAANQAMILDTPLEKQPTVQQAAADVRDAWLALKRTHIVSPVEGYVSRRSVQLGAR 237

Query: 222 IVYKSTL 228
           I   S+L
Sbjct: 238 ITTSSSL 244


>gi|23500219|ref|NP_699659.1| HlyD family secretion protein [Brucella suis 1330]
 gi|62317660|ref|YP_223513.1| HlyD family secretion protein [Brucella abortus bv. 1 str. 9-941]
 gi|83269643|ref|YP_418934.1| RTX secretion protein D:secretion protein HlyD [Brucella melitensis
           biovar Abortus 2308]
 gi|161620538|ref|YP_001594424.1| secretion protein HlyD family protein [Brucella canis ATCC 23365]
 gi|189022909|ref|YP_001932650.1| Secretion protein HlyD [Brucella abortus S19]
 gi|225686274|ref|YP_002734246.1| secretion protein HlyD family protein [Brucella melitensis ATCC
           23457]
 gi|254691156|ref|ZP_05154410.1| secretion protein HlyD family protein [Brucella abortus bv. 6 str.
           870]
 gi|254695540|ref|ZP_05157368.1| secretion protein HlyD family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|254698940|ref|ZP_05160768.1| secretion protein HlyD family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254699726|ref|ZP_05161554.1| secretion protein HlyD family protein [Brucella suis bv. 5 str.
           513]
 gi|254711683|ref|ZP_05173494.1| secretion protein HlyD family protein [Brucella pinnipedialis
           B2/94]
 gi|256015254|ref|YP_003105263.1| HlyD family secretion protein [Brucella microti CCM 4915]
 gi|256029682|ref|ZP_05443296.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M292/94/1]
 gi|256043371|ref|ZP_05446304.1| secretion protein HlyD family protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256111619|ref|ZP_05452614.1| secretion protein HlyD family protein [Brucella melitensis bv. 3
           str. Ether]
 gi|256157835|ref|ZP_05455753.1| secretion protein HlyD family protein [Brucella ceti M490/95/1]
 gi|256253203|ref|ZP_05458739.1| secretion protein HlyD family protein [Brucella ceti B1/94]
 gi|256256342|ref|ZP_05461878.1| secretion protein HlyD family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260167228|ref|ZP_05754039.1| HlyD family secretion protein [Brucella sp. F5/99]
 gi|297249704|ref|ZP_06933405.1| HlyD family secretion protein [Brucella abortus bv. 5 str. B3196]
 gi|23463823|gb|AAN33664.1| HlyD family secretion protein [Brucella suis 1330]
 gi|62197853|gb|AAX76152.1| HlyD family secretion protein [Brucella abortus bv. 1 str. 9-941]
 gi|82939917|emb|CAJ12930.1| Gram-negative bacterial RTX secretion protein D:Secretion protein
           HlyD [Brucella melitensis biovar Abortus 2308]
 gi|161337349|gb|ABX63653.1| secretion protein HlyD family protein [Brucella canis ATCC 23365]
 gi|189021483|gb|ACD74204.1| Secretion protein HlyD [Brucella abortus S19]
 gi|225642379|gb|ACO02292.1| secretion protein HlyD family protein [Brucella melitensis ATCC
           23457]
 gi|255997914|gb|ACU49601.1| HlyD family secretion protein [Brucella microti CCM 4915]
 gi|297173573|gb|EFH32937.1| HlyD family secretion protein [Brucella abortus bv. 5 str. B3196]
          Length = 349

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 77  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 136

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++        +    + +       +       D+A    A   +++   +   + 
Sbjct: 137 NTVRVDALLPRGVTT----QSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 192

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 193 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVPAVK-- 249

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 250 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 306

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 307 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 346


>gi|254675253|ref|NP_958793.2| plectin isoform 1b [Mus musculus]
          Length = 4543

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1340 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1399

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1452

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1453 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1511

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1512 AELALRVKAEAEAAREKQR 1530



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2180 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2233

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2234 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2293

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2294 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2350

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2351 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2399



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1637 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1696

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1697 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1746

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1747 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1805

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1806 LAEEAKRQRQLAEED 1820



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2317 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2376

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2377 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2434

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2435 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2494

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2495 EKDSLLQRERFIEQ 2508



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2229 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2288

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2289 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2348

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2349 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2408

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2409 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2439



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1338 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1397

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1398 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1457

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1458 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1517

Query: 291  T 291
             
Sbjct: 1518 V 1518



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1257 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1312

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1313 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1372

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1373 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1432

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1433 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1483



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1548 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1607

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1608 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1667

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1668 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1727

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1728 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1771



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1453 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1506

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1507 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1564

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1565 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1622

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1623 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1654


>gi|254675119|ref|NP_001157021.1| plectin isoform 1b2alpha [Mus musculus]
          Length = 4548

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1345 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1404

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1405 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1457

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1458 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1516

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1517 AELALRVKAEAEAAREKQR 1535



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2185 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2238

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2239 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2298

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2299 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2355

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2356 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2404



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1642 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1701

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1702 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1751

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1752 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1810

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1811 LAEEAKRQRQLAEED 1825



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2322 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2381

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2382 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2439

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2440 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2499

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2500 EKDSLLQRERFIEQ 2513



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2234 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2293

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2294 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2353

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2354 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2413

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2414 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2444



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1343 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1402

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1403 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1462

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1463 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1522

Query: 291  T 291
             
Sbjct: 1523 V 1523



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1262 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1317

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1318 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1377

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1378 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1437

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1438 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1488



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1553 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1612

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1613 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1672

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1673 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1732

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1733 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1776



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1458 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1511

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1512 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1569

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1570 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1627

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1628 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1659


>gi|229591309|ref|YP_002873428.1| putative multidrug resistance protein A [Pseudomonas fluorescens
           SBW25]
 gi|229363175|emb|CAY50224.1| putative multidrug resistance protein A [Pseudomonas fluorescens
           SBW25]
          Length = 400

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 83/217 (38%), Gaps = 22/217 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           G+ S   +L   + ++R +Y N   ++ + +  +A + + Q +    K L +  A+SQ +
Sbjct: 102 GLQSAQANLARTVRQVRGLYSNVDGMKAQVNAQKADVQTAQDNFNRRKTLAQGGAISQEE 161

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L+             R+++   KN L ++ +    +N    + +     D++        
Sbjct: 162 LSHA-----------RDSLTAAKNALTNLEQQLKTSNALVDDTVISSHPDVQAAAAQL-- 208

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        + T+++P+ G +   ++       Q    LM ++P +   +I A   
Sbjct: 209 -----RQAYLANARSTLIAPVTGYVAK-RTVQLGQRVQPGTALMAVIPLN-QLWIDANFK 261

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             Q++ ++ G    +    Y      K+   ++ +  
Sbjct: 262 ETQLRDMRIGQPVDIESDIYGSDV--KYSGTVDSLGA 296



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 68/192 (35%), Gaps = 13/192 (6%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKS 61
                N  R     L  +TL+ I+ ++G+  W  +      S     +     NVVEI  
Sbjct: 12  QPKQDNNPRKRKVMLIGLTLIVILAVVGVWGWYELYGRFSESTD---DAYVNGNVVEITP 68

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             +G +     ++G  + +G  L+ F+  +         V +++ + ++      +  L 
Sbjct: 69  LVTGTVVSIGADDGDLVHEGQVLINFDPNDAA-------VGLQSAQANLARTVRQVRGLY 121

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           +  D ++    +++  +     + +    K    G +     L      + +      +L
Sbjct: 122 SNVDGMKAQVNAQKADVQ--TAQDNFNRRKTLAQGGAISQEELSHARDSLTAAKNALTNL 179

Query: 182 ENKSSLLRALLS 193
           E +     AL+ 
Sbjct: 180 EQQLKTSNALVD 191


>gi|148697588|gb|EDL29535.1| plectin 1, isoform CRA_c [Mus musculus]
          Length = 4552

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1349 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1408

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1409 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1461

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1462 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1520

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1521 AELALRVKAEAEAAREKQR 1539



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2189 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2242

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2243 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2302

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2303 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2359

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2360 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2408



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1646 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1705

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1706 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1755

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1756 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1814

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1815 LAEEAKRQRQLAEED 1829



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2326 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2385

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2386 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2443

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2444 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2503

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2504 EKDSLLQRERFIEQ 2517



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2238 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2297

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2298 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2357

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2358 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2417

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2418 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2448



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1347 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1406

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1407 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1466

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1467 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1526

Query: 291  T 291
             
Sbjct: 1527 V 1527



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1266 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1321

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1322 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1381

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1382 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1441

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1442 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1492



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1557 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1616

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1617 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1676

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1677 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1736

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1737 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1780



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1462 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1515

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1516 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1573

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1574 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1631

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1632 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1663


>gi|119195685|ref|XP_001248446.1| hypothetical protein CIMG_02217 [Coccidioides immitis RS]
          Length = 1260

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 13/205 (6%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTE-KSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           +D    + +  ++  +   R  +  E +  +  LN   D +   +E +    LD      
Sbjct: 640 DDQAAAEKLRAREEELYGERDQLKAEWEQQMVALNKSKDDMAAEYEGK----LDTKKTEL 695

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
            T     +   + +         R   +   + DLE K    +A L   QK+L   ++  
Sbjct: 696 ETKQGELDAKQAELQAKQSELDARQEELNATKSDLEAK----QAELVDRQKELEEKQSEV 751

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           E     Q ++N+ +  +     EL +   E +     +     E      + L+E+  +L
Sbjct: 752 EAK---QEEINRLKSELESKIAELEDKRRELEQKQGELESKQTELQA-IQDELREVKAEL 807

Query: 267 EQNQRTFADEMSKLTILEKTREQKT 291
           E+ +     + + L   ++    K 
Sbjct: 808 EEKKSQLESKQADLDKKQEELTAKQ 832



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 81/226 (35%), Gaps = 29/226 (12%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDT-----EKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           +  D + L + S++    ++       + S L  L  +  +   A  +++E+L     + 
Sbjct: 577 KANDELTLVRSSLEQQIANLQRTMQDEKASHLQELKRREMLKSDALAAQKEELQGHFQEM 636

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL------------DLENKSSLLRALLS 193
                +     + +    L  +  ++++ +  ++            + E K    +  L 
Sbjct: 637 KKKDDQAAAEKLRAREEELYGERDQLKAEWEQQMVALNKSKDDMAAEYEGKLDTKKTELE 696

Query: 194 SHQKDLTMMK-NLFEKNA---VSQNDLNQQ-------ERIVYKSTLELRENIHEQKNMLR 242
           + Q +L   +  L  K +     Q +LN         +  +     EL E   E +    
Sbjct: 697 TKQGELDAKQAELQAKQSELDARQEELNATKSDLEAKQAELVDRQKELEEKQSEVEAKQE 756

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            IN L  E   + A  L++  R+LEQ Q     + ++L  ++    
Sbjct: 757 EINRLKSELESKIAE-LEDKRRELEQKQGELESKQTELQAIQDELR 801


>gi|40849922|gb|AAR95673.1| plectin 8 [Mus musculus]
          Length = 4543

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1340 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1399

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1452

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1453 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1511

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1512 AELALRVKAEAEAAREKQR 1530



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2180 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2233

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2234 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2293

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2294 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2350

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2351 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEED 2399



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1637 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1696

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1697 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1746

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1747 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1805

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1806 LAEEAKRQRQLAEED 1820



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2317 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2376

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2377 AEAERLKL-RMVEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2434

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2435 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2494

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2495 EKDSLLQRERFIEQ 2508



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2229 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2288

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2289 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2348

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2349 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEEDAQRFRKQAE 2408

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2409 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2439



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1338 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1397

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1398 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1457

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1458 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1517

Query: 291  T 291
             
Sbjct: 1518 V 1518



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1257 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1312

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1313 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1372

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1373 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1432

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1433 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1483



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1548 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1607

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1608 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1667

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1668 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1727

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1728 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1771



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1453 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1506

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1507 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1564

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1565 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1622

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1623 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1654


>gi|300693078|ref|YP_003749051.1| heavy metal cation tricomponent efflux membrane fusion protein hmwb
           (czcb-like)(rnd-hme-mfp) [Ralstonia solanacearum PSI07]
 gi|299075115|emb|CBJ34397.1| Heavy metal cation tricomponent efflux membrane fusion protein HmwB
           (CzcB-like)(RND-HME-MFP) [Ralstonia solanacearum PSI07]
          Length = 392

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 75/242 (30%), Gaps = 26/242 (10%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL--ELRENIHEQKNMLR 242
           +  +R + +     +   K LF+   +   DL Q E  +  +    +L      +   L 
Sbjct: 90  AGKIRNVYAKVGDTVAKGKPLFD---IESPDLVQAESTLISTAGTRKLTTTALARARQLF 146

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFA------DEMSKLTILEKTREQKTILSPI 296
            I  L  +   +  +  +      +  +   A       +M ++    +T    T+ SPI
Sbjct: 147 EIQGLSQKDLDQATSDQQAAEAAYKAAREAVAIFGKTPAQMDQIIETRRTDPVLTVTSPI 206

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           AG +   ++       Q        V      +++A V    +  +  G    +R   + 
Sbjct: 207 AGQVTA-RAAQPGLLVQPGNAAPFTVADVSTMWMQAFVPEADVPLLHVGQPVKIRVMAFP 265

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +     F   +  I   +    +         ++++       D   ELR G       T
Sbjct: 266 NR---VFTGKVTTIGASVDANTH--------RILVR---SEIEDPKHELRPGMFTSFDIT 311

Query: 417 AK 418
             
Sbjct: 312 TG 313


>gi|262403792|ref|ZP_06080350.1| hypothetical protein VOA_001781 [Vibrio sp. RC586]
 gi|262350296|gb|EEY99431.1| hypothetical protein VOA_001781 [Vibrio sp. RC586]
          Length = 344

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 98/303 (32%), Gaps = 33/303 (10%)

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             K+  D +    +++     + ++ L +      +         I+ +       + + 
Sbjct: 72  AIKATEDGVIGPLNLVVGQSVTEQQALFEVTNSTLANELDFMRQEIAQL------NVNQE 125

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +I+ + L +EN        +   +K   M K    K  VS  D      + Y +  EL 
Sbjct: 126 ENIHYHTLAIENAQRN-SDQIQQIRKRYEMYK---AKGQVSDVDYAAIINLAYGAQNELN 181

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                  +      E               ++  + Q +R     M +L + +   E+  
Sbjct: 182 SRNIALNDAQTSYQERL-------------LAGPISQAKRGL---MKELVVKQSQLERLN 225

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I SP  G +V           ++  PL+ I  +     + A + PK +   + G  A V 
Sbjct: 226 IHSPFDGRVVALPVV-EGQQVEKGDPLVVIAKNITP-QVTAYLNPKYLDVSQFGTHAKVI 283

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY-EVILKITDLAFSDNNIELRNGFP 410
           FP             +E +  +  Q     + +  Y EV L   +    +  IE   G  
Sbjct: 284 FPD-GKTFSATVSEAVEIVSKLPIQLAKPFEGKPAYMEVTLTFDEELEENRWIE---GMT 339

Query: 411 AEV 413
            EV
Sbjct: 340 VEV 342



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 71/220 (32%), Gaps = 18/220 (8%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
             M+   KR        + L  +I  ++ +  +     + +   +    +     V IK+
Sbjct: 20  KVMYGQAKRGGYRLRWYLILALVISPLLAMGYYLYRDKVLVIAPA----IVTSKPVAIKA 75

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G+I    +  G  + +   L    +    + +D  +  I  L  + +          
Sbjct: 76  TEDGVIGPLNLVVGQSVTEQQALFEVTNSTLANELDFMRQEIAQLNVNQEENIHYHTL-- 133

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM--RSIYLNRL 179
               +      S + Q +    + +    +V +   +++          +  R+I LN  
Sbjct: 134 ---AIENAQRNSDQIQQIRKRYEMYKAKGQVSDVDYAAIINLAYGAQNELNSRNIALNDA 190

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
               +  LL   +S  +      + L ++  V Q+ L + 
Sbjct: 191 QTSYQERLLAGPISQAK------RGLMKELVVKQSQLERL 224


>gi|297616423|ref|YP_003701582.1| efflux transporter RND family, MFP subunit [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297144260|gb|ADI01017.1| efflux transporter, RND family, MFP subunit [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 404

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/264 (10%), Positives = 74/264 (28%), Gaps = 35/264 (13%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + +      +   R +++   + + E      + +  + ++ L   + L+   A+S   L
Sbjct: 104 LEAQQAEAALMEARAQAVLQAKGETEPAVQQAKLVYDNAKEKLKRNQELYAAGAISLEQL 163

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              +        +    + +     +       +A   +                     
Sbjct: 164 EAAQLDADLKKSQYESALAQAAASRQSYEARVRQAEASW--------------------- 202

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                +     +   I +P  GTI+  ++     +      L  I  +     ++A ++ 
Sbjct: 203 ----KLAVNRLQAARIAAPCDGTILA-RTVEKGQFVSAGTALFTIG-NLSSLEVQADISE 256

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             +  +  G    +        + +     ++ I P    +  N   Q    V +     
Sbjct: 257 VDVLRLAVGQDVEITGEPLGTNKYR---GRVKDIAPRAENKIKNQSEQTIVPVTI----- 308

Query: 397 AFSDNNIELRNGFPAEVLFTAKNT 420
               N   LR G+  ++  T    
Sbjct: 309 GVIGNAELLRPGYNVDLNITTARR 332



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 5/168 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P+  ++ ++G ++   +   I +  SGI++  +V+ G Q+  G  LL F D +      
Sbjct: 49  APLVANIFTTGTVVV-RDKEVITAKTSGIVQDVKVKVGDQVKAGQVLLQFNDRDLILEAQ 107

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   R     +         +   L   +++ +E+L      Y +    +     
Sbjct: 108 QAEAALMEARAQAVLQAKGETEPAVQQAKL--VYDNAKEKLKRNQELYAAGAISLEQLEA 165

Query: 158 SSVYRSLKMKL--TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           + +   LK     + +     +R   E +     A        L   +
Sbjct: 166 AQLDADLKKSQYESALAQAAASRQSYEARVRQAEASWKLAVNRLQAAR 213


>gi|192360644|ref|YP_001982994.1| RND family efflux transporter MFP subunit [Cellvibrio japonicus
           Ueda107]
 gi|190686809|gb|ACE84487.1| efflux transporter, RND family, MFP subunit [Cellvibrio japonicus
           Ueda107]
          Length = 488

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 55/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E  V+++G +   D V ++ +  SG +KK  V+ GS++  G  L   +       +D  
Sbjct: 86  LENLVTATGSLQPRDYV-DVGAQVSGQLKKLLVDVGSEVKAGDLLAEIDATVYAAKVDAT 144

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  + NL   +   ++ L     +Y    +    +E+       +      K     + +
Sbjct: 145 RAQLTNLNAQLLDRQAQLQLAEIQYQ--RQQNLQKEDATTAEALQSAEASVKSARAQLKA 202

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K + + +R    N
Sbjct: 203 LEAQIKQQESTLRVEAAN 220


>gi|39995604|ref|NP_951555.1| RND family efflux transporter MFP subunit [Geobacter sulfurreducens
           PCA]
 gi|39982367|gb|AAR33828.1| efflux transporter, RND family, MFP subunit [Geobacter
           sulfurreducens PCA]
 gi|298504623|gb|ADI83346.1| efflux pump, RND family, membrane fusion protein [Geobacter
           sulfurreducens KN400]
          Length = 402

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 68/209 (32%), Gaps = 26/209 (12%)

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANY------LKEISRDLEQNQRTFADE 276
              + L+ R    + K  +    +L  E  +  +++       +E +  ++  + +    
Sbjct: 106 AQANLLKARATAADAKRTMERNRQLVKEGVVSQSDFDTAETGAQEAAAAVKAAEASVVQT 165

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAK 333
              L+  E   +  TI SP+ G ++  ++         S     L  I        I   
Sbjct: 166 RGALSRAETNLKNATIRSPVDGVVIS-RAVDVGQTVAASFQTPTLFTIAQDLTRMQIETS 224

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVIL 391
           V    I  V+ G   T     Y D +   F A + +I   P+I+Q               
Sbjct: 225 VDEADISRVRMGQQVTFTVDAYPDEK---FNARVAQIRNAPVITQNVVTYVVV------- 274

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               +   + +++L+ G  A V       
Sbjct: 275 ----ITVDNPDLKLKPGMTANVAIEVGKK 299



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 9/76 (11%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +VS++G +     V  + +  SG I +  V+  + + +G  +   +       ++  + +
Sbjct: 44  TVSATGNLSAVTTVQ-VGTQVSGTIYRLLVDYNTPVKKGQVIAEIDPALFRADVEQARGN 102

Query: 103 IKNLRCHIDTEKSALD 118
           + + + ++   ++   
Sbjct: 103 LLSAQANLLKARATAA 118


>gi|194333930|ref|YP_002015790.1| putative ABC transport system, lipoprotein [Prosthecochloris
           aestuarii DSM 271]
 gi|194311748|gb|ACF46143.1| putative ABC transport system, lipoprotein [Prosthecochloris
           aestuarii DSM 271]
          Length = 304

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 82/236 (34%), Gaps = 11/236 (4%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             L  +   ++A + S Q     ++        SQ D+  Q++      ++  E + +  
Sbjct: 76  TQLHLQIEQVKAQIQSLQARQETIR--------SQMDVLGQQKTNAAREVQRFEKLVQAD 127

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            + R   +   +        +   +   E           ++  L+   ++  + +P+ G
Sbjct: 128 AVPRKQRDDVLDQYRVIEKEILATASQQESIDADILSLNVRIRELDDRIDKSIVRNPVKG 187

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T++              QPL  I  +    ++R  +   Q+ H+      TV F +    
Sbjct: 188 TVL-VTYVEPGEIVSYGQPLYSIA-NLDSMFLRVYLDGTQLPHISLRQPVTVLFDN-DSR 244

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
             +  +  I  I          +QT++    ++    ++  + +  L+ G P EV+
Sbjct: 245 TNQSKEGRIAWISSKAEFTPKIIQTKQDRVTLVYAVKISVPNADGSLKIGMPGEVV 300



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 46/136 (33%), Gaps = 2/136 (1%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            + +  SG +  F    G +I  G      +  +    I+  K  I++L+   +T +S +
Sbjct: 44  IVSAEASGRLLSFSAVEGEEIKDGNMAGVIDTTQLHLQIEQVKAQIQSLQARQETIRSQM 103

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D L  +      A E +  + L                    + + +    ++  SI  +
Sbjct: 104 DVLGQQKT--NAAREVQRFEKLVQADAVPRKQRDDVLDQYRVIEKEILATASQQESIDAD 161

Query: 178 RLDLENKSSLLRALLS 193
            L L  +   L   + 
Sbjct: 162 ILSLNVRIRELDDRID 177


>gi|300313894|ref|YP_003777986.1| RND family efflux transporter MFP subunit [Herbaspirillum
           seropedicae SmR1]
 gi|300076679|gb|ADJ66078.1| efflux transporter, RND family, MFP subunit protein [Herbaspirillum
           seropedicae SmR1]
          Length = 428

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 88/270 (32%), Gaps = 24/270 (8%)

Query: 1   MHHFMW--KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE 58
           MH      +   R   A+ +    L ++ ++   + S   P   + +  G ++ +     
Sbjct: 1   MHPTASTPRRQGRTSSATARLALSLILVAVLAACSRSGDQPKPTAQAEVGYVVVKAQRQA 60

Query: 59  ----------------IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
                           I+    GII+K   + GS +  G PL   +        D  + S
Sbjct: 61  LTTELPGRTTAYLAADIRPQVGGIIQKRLFKEGSTVKAGQPLYQIDPASYQAAYDSARAS 120

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +      + + K   +    +Y  L K     ++   D         + V     +    
Sbjct: 121 LLKAEATLASSKLKAE----RYAELNKIDAVSKQDNDDAQSTLRQNQADVEVQKAAVQTA 176

Query: 163 SLKMKLTRMRSIYLNRLDLENKS--SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           ++ ++ T++ S    R++    +  +L+ A  ++    +  +  ++     S  DL +  
Sbjct: 177 AINLQYTKILSPISGRIEKSAVTPGALVTASQTTALTTVQQIDPIYVDVTQSTVDLLRLR 236

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDE 250
           R +    +        Q  ++      Y+ 
Sbjct: 237 RELASGQIRKSGENAAQVKIVLEDGSTYER 266



 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 61/187 (32%), Gaps = 17/187 (9%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               +     +     +      R +   + +  L  + S ++A    +Q D    +  +
Sbjct: 55  KAQRQALTTELPGRTTAYLAADIRPQVGGIIQKRLFKEGSTVKAGQPLYQIDPASYQAAY 114

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +    ++  L + E  +  S L+      E+   L  I+ +  + N        +    L
Sbjct: 115 DS---ARASLLKAEATLASSKLK-----AERYAELNKIDAVSKQDN-------DDAQSTL 159

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHS 325
            QNQ     + + +       +   ILSPI+G I  +   +       SQ   +  V   
Sbjct: 160 RQNQADVEVQKAAVQTAAINLQYTKILSPISGRIEKSAV-TPGALVTASQTTALTTVQQI 218

Query: 326 KLTYIRA 332
              Y+  
Sbjct: 219 DPIYVDV 225


>gi|283835963|ref|ZP_06355704.1| inner membrane protein YiaV [Citrobacter youngae ATCC 29220]
 gi|291068142|gb|EFE06251.1| inner membrane protein YiaV [Citrobacter youngae ATCC 29220]
          Length = 378

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 76/226 (33%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT--MMKNLFEKNA 210
           +   +  +   +     + +++     +++  +   +A      KD       +  + N 
Sbjct: 99  YQARVDRLKADIVTAQHKEQALIAQLDEMKANTQRAKATRDKLAKDYQRYAQGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +I EQ+ +   ++ L                  L +N 
Sbjct: 159 FSERDIDAARQNYLAQEASVKSSIAEQQQIQSQLDSLV-----------------LGEN- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   E   +Q  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAEFNLDQTVVRAPSDGYVTQVLMR-PGTYAAALPMRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            I A+     +  ++ G  A V F        K F   +  I P +
Sbjct: 260 II-AQFRQNSLLRLEPGDEAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 54/150 (36%), Gaps = 3/150 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L           +D  K  I   +       + LD
Sbjct: 66  VVPQVTGVVTEVTDKKNTLIKKGEVLFKLNPGRYQARVDRLKADIVTAQHKEQALIAQLD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       ++A  +R++   D+      + +KV  +    +  + +  L +  S+  + 
Sbjct: 126 EMKANT---QRAKATRDKLAKDYQRYAQGSQAKVNPFSERDIDAARQNYLAQEASVKSSI 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            + +   S L +L+      +  +K    +
Sbjct: 183 AEQQQIQSQLDSLVLGENSQIASLKAQLAE 212


>gi|254517040|ref|ZP_05129098.1| secretion protein HlyD [gamma proteobacterium NOR5-3]
 gi|219674545|gb|EED30913.1| secretion protein HlyD [gamma proteobacterium NOR5-3]
          Length = 385

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 47/350 (13%), Positives = 97/350 (27%), Gaps = 89/350 (25%)

Query: 17  LKRMTLLSIIGIIGLITWSIL----LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           +KR T + +  I+  + W +L     P        G ++       +    +G + K  V
Sbjct: 32  IKRTTWIVLAVIVSSLAWYLLSDRYAPYTSQARVQGYVIG------VAPEVAGTVTKVLV 85

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            N  ++ +G  L   +  +    +   +  + N R  ++   + +           KA E
Sbjct: 86  SNNQEVEEGEALFEIDSSQYQIAVSRAESDLANARSQVEAGNATVASARANLTA-AKANE 144

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            R  Q    L +   T     +                          LE+  + L    
Sbjct: 145 LRASQDYARLKRLRETDPGTLSLRR-----------------------LESSKASLD--- 178

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
                                    Q    V  +  +++  I ++       N +   A 
Sbjct: 179 -------------------------QARAKVAAAESDIQRAIEQKGGDDEGSNAILLSAG 213

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                 L++   DL       +                       G I   ++     YA
Sbjct: 214 A----ALEKARLDLANTVVKASSR---------------------GLITDLRAD-VGQYA 247

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
              +P+M ++      +I A  T   + H++ G +A + F     +    
Sbjct: 248 GTGKPVMTLIAIHD-LWINAAFTENNLGHMRPGSSAEIVFDALPGVVFGG 296


>gi|153832656|ref|ZP_01985323.1| secretion protein, HlyD family [Vibrio harveyi HY01]
 gi|148871001|gb|EDL69885.1| secretion protein, HlyD family [Vibrio harveyi HY01]
          Length = 341

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 86/259 (33%), Gaps = 24/259 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +  +      + E+++ Q+++         S+ +   +     + ++ + +   
Sbjct: 50  RAKILSVAPQVQGQVISVEAKDFQVVNKGDLLLKIDSRPYLLAVKQAKAAYQLAVQQHDV 109

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 +        R+ L+  Q +     +L ++   S  DL+  +  +  +   L + 
Sbjct: 110 ADKQVTEAVAGLDAARSNLTEAQVEYKRTDSLVKRKLASDQDLDTAKNKLANAQAGLEQA 169

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +  + +  E   EA +      +                   L   E       I 
Sbjct: 170 RATVEKAIANRGEEGAEAAVVQQAAAQ-------------------LAQAELNLSYTDIT 210

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ G      + +  +     Q L  ++      ++RA      + H+K G  A V   
Sbjct: 211 SPVDGIAGEINTHT-GSVVSIGQTLFPVI-IKDSYWVRANFKETDLTHIKAGMHAEVVID 268

Query: 354 HYADIREKKFKAIIEKIDP 372
            Y D+    + A +E++ P
Sbjct: 269 MYPDV---VWDAKVEELSP 284


>gi|261217097|ref|ZP_05931378.1| secretion protein HlyD family protein [Brucella ceti M13/05/1]
 gi|261319967|ref|ZP_05959164.1| secretion protein HlyD family protein [Brucella ceti M644/93/1]
 gi|260922186|gb|EEX88754.1| secretion protein HlyD family protein [Brucella ceti M13/05/1]
 gi|261292657|gb|EEX96153.1| secretion protein HlyD family protein [Brucella ceti M644/93/1]
          Length = 353

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 81  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 140

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++        +    + +       +       D+A    A   +++   +   + 
Sbjct: 141 NTVRVDALLPRGVTT----QSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 196

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 197 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGAQLVSLVPAVK-- 253

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 254 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 310

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 311 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 350


>gi|13473285|ref|NP_104852.1| periplasmic linker protein [Mesorhizobium loti MAFF303099]
 gi|14024033|dbj|BAB50638.1| mll3833 [Mesorhizobium loti MAFF303099]
          Length = 370

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 65/205 (31%), Gaps = 18/205 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V Q D  +   +V     E + ++ +    L    +   +A+L            L+  +
Sbjct: 88  VKQGDHVKTGDLVLMLAAEEKISMVDNAKQLVAQRQAELDASLRLMKTGNLPKLQLDTAR 147

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  S+L   +   ++  + +P  G I         +   Q   +  I+        
Sbjct: 148 SNLTLAQSQLDTAQAELDRNEVKAPFDGVIDRVPV-ELGSSVMQGGEVATILKLD-PVIA 205

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           R +++ + + ++K G  A VR         +  +  +  I    S      +        
Sbjct: 206 RGEISERDLGYLKIGDKAGVRLVS-----GQTVEGTVRYISRDASSATRTFRV------- 253

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF 415
               ++A  + +  +  G  AE+  
Sbjct: 254 ----EVAIPNADGSVPAGMTAEIQL 274



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 4/104 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I K  V+ G  +  G  +L     E   ++D  K  +   +  +D     +   N   
Sbjct: 81  GVIDKLPVKQGDHVKTGDLVLMLAAEEKISMVDNAKQLVAQRQAELDASLRLMKTGNLPK 140

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             L+ A       L     +  +  +++    + + +  +  ++
Sbjct: 141 LQLDTA----RSNLTLAQSQLDTAQAELDRNEVKAPFDGVIDRV 180


>gi|258542613|ref|YP_003188046.1| multidrug resistance protein MdtN [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633691|dbj|BAH99666.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636750|dbj|BAI02719.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639803|dbj|BAI05765.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642859|dbj|BAI08814.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645914|dbj|BAI11862.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648967|dbj|BAI14908.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651954|dbj|BAI17888.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256655011|dbj|BAI20938.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 358

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 55/438 (12%), Positives = 124/438 (28%), Gaps = 112/438 (25%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSS--------SGEILNEDNV 56
           +W  L + H     +  L  +I +  +        +   V +        S     +  +
Sbjct: 5   VWAGLMQ-HVRISGKKPLGILIAVTCIGA----ATLLGVVVAHKSNKYPSSDSASIDAEL 59

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           V + S   G +   +V     + +G  L   +        +   ++++    +++   + 
Sbjct: 60  VHVASTVGGRLIDLRVHVNQHVHKGDVLYRLDP-------EPYLLTVRQAEANLELANAE 112

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           ++                                      +  V  +     T   +   
Sbjct: 113 VE----------------------------------NQKRLVGVKTANAAVATDQITRAQ 138

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              DL  +++               +K L  K  +   + +Q    ++ + + L +   +
Sbjct: 139 TNRDLAARTT-------------ERLKPLAGKAYIPWQEYDQARVALHNAEVSLAQAHQQ 185

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                  +                    DL+ +    A   + L        Q T+++P 
Sbjct: 186 SVAADMAVG-------------------DLKSSLAAQAASQAALEHARYELRQTTVIAPT 226

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +   Q          SQ L  ++      Y+ A +    +  +  G   TV    Y+
Sbjct: 227 DGYVTSLQV-KPGEVLAPSQVLFTLI-ADDAWYVTAPIREINLSSIHAGDCVTV----YS 280

Query: 357 DI-REKKFKAIIEKID---------------PIISQQDNNLQTQEYYEVILKITDLAFSD 400
            I R    +  +E I                PI+ +Q + +   + + V ++I D+    
Sbjct: 281 MINRHTPLRGHVESIGWGIMSADTTILARALPIVPRQMDWVHVAQRFPVRIQIDDIRPEL 340

Query: 401 NNIELRNGFPAEVLFTAK 418
               LR G  A V     
Sbjct: 341 ----LRMGATANVEIRYG 354


>gi|238765057|ref|ZP_04625993.1| Multidrug resistance protein A [Yersinia kristensenii ATCC 33638]
 gi|238696743|gb|EEP89524.1| Multidrug resistance protein A [Yersinia kristensenii ATCC 33638]
          Length = 394

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 87/262 (33%), Gaps = 32/262 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +   +L +  LS  Q DL     L   +A+ +
Sbjct: 102 EQAYEQAKTALANSVRQTHQLMINSKQYQANIALKKTELSKAQNDLKRRVVLGSVDAIGR 161

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +   L   I +       +     E                   Q   
Sbjct: 162 EELQHARDAVDAAQASLDVAIAQYNANQALVLNTPLE------------------KQPAV 203

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +KL       ++  ++SPI G +   +S           PLM ++P ++  +I A 
Sbjct: 204 EQAAAKLRDAWLALQRTKVVSPITGFVSR-RSVQVGAEIANGAPLMAVIPANE-MWIDAN 261

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQT 383
               Q+ +++ G  ATV    Y D     F+  +  +D          P  +   N ++ 
Sbjct: 262 FKETQLANMRIGQPATVVTDFYGDDV--VFQGKVVGLDMGTGSAFSLLPAQNATGNWIKV 319

Query: 384 QEYYEVILKITDLAFSDNNIEL 405
            +   V +++     +++ + +
Sbjct: 320 VQRLPVRIQLDAKQLAEHPLRI 341



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 10/202 (4%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           K+     L    +  IIG+   I W ++L                N V+I S   G +  
Sbjct: 22  KQRKRVLLLLTGIFIIIGVAYFIYWFLVLRHHQETD---NAYVSGNQVQIMSQVPGSVVS 78

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKY 124
              EN   +  G  LLT +  +     +  K ++ N      +  I++++   +    K 
Sbjct: 79  VNFENTDLVKSGDILLTLDPTDAEQAYEQAKTALANSVRQTHQLMINSKQYQANIALKKT 138

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR--MRSIYLNRLDLE 182
           ++ +   + +   +L  +        +     + +   SL + + +       +    LE
Sbjct: 139 ELSKAQNDLKRRVVLGSVDAIGREELQHARDAVDAAQASLDVAIAQYNANQALVLNTPLE 198

Query: 183 NKSSLLRALLSSHQKDLTMMKN 204
            + ++ +A        L + + 
Sbjct: 199 KQPAVEQAAAKLRDAWLALQRT 220


>gi|165977251|ref|YP_001652844.1| hypothetical protein APJL_1850 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|307246743|ref|ZP_07528812.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307248885|ref|ZP_07530896.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307251419|ref|ZP_07533333.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307253498|ref|ZP_07535368.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307255728|ref|ZP_07537531.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307257913|ref|ZP_07539667.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307260180|ref|ZP_07541889.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307262307|ref|ZP_07543955.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|307264518|ref|ZP_07546102.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|165877352|gb|ABY70400.1| hypothetical protein APJL_1850 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|306852349|gb|EFM84585.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306854580|gb|EFM86772.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306856503|gb|EFM88645.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858999|gb|EFM91042.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306861288|gb|EFM93279.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306863560|gb|EFM95489.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306865725|gb|EFM97604.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306867970|gb|EFM99798.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|306870117|gb|EFN01877.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 387

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 54/146 (36%), Gaps = 1/146 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I+ +V +SG +   + V +I +  SG IK   V+ G ++ +G  L   +       + 
Sbjct: 43  GNIQKTVIASGTLQATEQV-DIGAQVSGQIKHILVQEGQKVKKGELLAVIDPRLAETELK 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           L K  + N   ++DT+K  L  L + ++  ++   +      +         +      I
Sbjct: 102 LAKAELANASANLDTKKINLKQLQSDWERHQRLIRTNATSQKETEEAKSRLNTAKAELQI 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +     +           L   ++ +
Sbjct: 162 AQNNLDIAKIRVEKAETELGYTEIRS 187



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 85/267 (31%), Gaps = 16/267 (5%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            ++    +  +++      L +   + K   L A++     +  +         +++ +L
Sbjct: 56  QATEQVDIGAQVSGQIKHILVQEGQKVKKGELLAVIDPRLAETELK--------LAKAEL 107

Query: 217 NQQERIVYKSTLELRENIH--EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                 +    + L++     E+   L   N    +   E  + L     +L+  Q    
Sbjct: 108 ANASANLDTKKINLKQLQSDWERHQRLIRTNATSQKETEEAKSRLNTAKAELQIAQNNLD 167

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYIRAK 333
               ++   E       I SP+  T++   + +        Q P++  + +     +  K
Sbjct: 168 IAKIRVEKAETELGYTEIRSPLDATVISVFAQNGQTLVTTQQVPVLMKLANIDTMKVNTK 227

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           ++   + H++ G   +      +D +      +++     I+    N     YY    K+
Sbjct: 228 ISEADVIHIQAGAPTSFTLLGESDSQFHGQLDMVKLAPVHITDTTENTNNAIYYYATFKV 287

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
                 + +  LR    A V       
Sbjct: 288 P-----NPDHRLRISMTAAVTIMLDKR 309


>gi|58428200|gb|AAW77237.1| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 385

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 85/297 (28%), Gaps = 32/297 (10%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V + A   R + L     + ++   +  N  + +   +L     +  S      +  
Sbjct: 103 QVPVQDFAHVKRGKLLAKIDDRIYAQQLEQANAQMQTAQANLANWEQQRHSAEATIAEQR 162

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  +A     +      + L  +  VS+ D               R+     +    
Sbjct: 163 AALSSNQAQRDRTRSAYARTQQLASQQLVSEQD---------------RDTAFAARAQAD 207

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                   A        + ++ +    +   A+  + + + +   +   IL+P  G    
Sbjct: 208 AGVVQARAAVQAAEENARGVTVNRAALEAAVANAQAAVRLAQINLDNTRILAPRDG---Q 264

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP     +I A     Q+  ++ G  A+       + R   
Sbjct: 265 LGVR-QGAYVTNGTQLMSLVP--DTLWIVANFKETQMAKIRIGQRASFTVDALDNAR--- 318

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPA 411
               ++ I P    +      +     + ++  +I      D +      LR G   
Sbjct: 319 LHGRVQDISPAAGSEFSVLPADNAAGNFVKIAQRIPLRISVDPDQPLAPRLRPGMSV 375



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 48/151 (31%), Gaps = 8/151 (5%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +    L  I  ++ L  W  L P   ++  +   L    +  I    SG + +  V++ +
Sbjct: 52  IGFGGLALIGVVLVLYAW-RLPPFVSAIERTENALVLGQITVIAPQVSGYVTQVPVQDFA 110

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L   +D        +    ++     + T ++ L     +    E     +  
Sbjct: 111 HVKRGKLLAKIDD-------RIYAQQLEQANAQMQTAQANLANWEQQRHSAEATIAEQRA 163

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            L     +   T S        +  + +  +
Sbjct: 164 ALSSNQAQRDRTRSAYARTQQLASQQLVSEQ 194


>gi|260881701|ref|ZP_05405051.2| secretion protein, HlyD family [Mitsuokella multacida DSM 20544]
 gi|260848204|gb|EEX68211.1| secretion protein, HlyD family [Mitsuokella multacida DSM 20544]
          Length = 363

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/346 (11%), Positives = 89/346 (25%), Gaps = 70/346 (20%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V+ G  + +G  +   +           + SI+ LR        A  F+    
Sbjct: 78  GRVVALYVKEGDTVKEGQVIARIDKRSLEAQKAEAEASIRALRAQ-----QAQAFVTTNM 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +    +    + Q      +     S+  +   +                          
Sbjct: 133 ESGTTSSAVSQAQATADKARADLALSQADHDRYA-------------------------- 166

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                               L  + AVS+   +Q +     +     +            
Sbjct: 167 -------------------ELLAQGAVSRQTFDQYDTKYQTAQATYAQAQAAVNQAQAGT 207

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +       E A  +K     LEQ + T  +        E + ++  I +P  G I   +
Sbjct: 208 LQTDASRANEQAMAMK-----LEQAEATLQNI-------EVSLDETEIRAPFDGVITE-K 254

Query: 305 SFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                +      PL+ +  P     ++  KV   ++     G    +         + + 
Sbjct: 255 YIEEGSMISNGTPLVAVQDPTDN--WVDIKVPETELSKYAVGQQVKL----IGRDDKTEV 308

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              I  I            ++   E  +   ++    ++  LR G 
Sbjct: 309 TGTITDISKKAEFATQRATSERGDETDIVSFNVKVQVDSEVLRPGM 354


>gi|84621791|ref|YP_449163.1| acriflavin resistance protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84365731|dbj|BAE66889.1| acriflavin resistance protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 415

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 88/266 (33%), Gaps = 29/266 (10%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V    I++V   +  K+ ++      R++     + L  + ++ Q+++   +    ++ V
Sbjct: 84  VVARRIATVSAQVTGKVLQVMIEEGMRVEAGQVMATLDPIETNAQREVGAAQLAAARSQV 143

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
              ++  Q  +     + L+  + EQ       ++   + +         +   L+  QR
Sbjct: 144 --QNVQAQLVVAEADAMRLQSLVGEQLVSRSQYDQAMSQRDA--------LRAQLQVAQR 193

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ----SQPLMKIVPHSKL 327
             A    +L++ +   +   + +P AG +V  ++                   ++     
Sbjct: 194 NVAVATHELSLSDIHVDFTVVRAPFAG-VVTAKAAQPGEIVSPLATGGFTRTGMIVDMDS 252

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +  +V    I  V+    A V    Y D R         K+  II   D    T    
Sbjct: 253 LEVEVEVGEAYIGRVQPKMPAEVILDAYPDWRIPA------KVIAIIPAADRGKAT---- 302

Query: 388 EVILKITDLAFSDNNIELRNGFPAEV 413
            V +++   A    +  +       V
Sbjct: 303 -VKVRV---ALKVKDARIVPDMGVRV 324



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/131 (11%), Positives = 46/131 (35%), Gaps = 3/131 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
              + +SG +     +  + +  +G + +  +E G ++  G  + T + IET    ++  
Sbjct: 75  SSVLDASGYV-VARRIATVSAQVTGKVLQVMIEEGMRVEAGQVMATLDPIETNAQREVGA 133

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +   R  +   ++ L  +  + D +       E+ +         +        +   
Sbjct: 134 AQLAAARSQVQNVQAQL--VVAEADAMRLQSLVGEQLVSRSQYDQAMSQRDALRAQLQVA 191

Query: 161 YRSLKMKLTRM 171
            R++ +    +
Sbjct: 192 QRNVAVATHEL 202


>gi|291535336|emb|CBL08448.1| RND family efflux transporter, MFP subunit [Roseburia intestinalis
           M50/1]
          Length = 472

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 49/357 (13%), Positives = 97/357 (27%), Gaps = 80/357 (22%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V+ G  + +G  L T +     D                                
Sbjct: 83  ITAVNVQVGDIVKEGDVLCTLDSSTIQD-------------------------------- 110

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                     Q+ D       T +       +    S +   T  R+    +  L     
Sbjct: 111 ----------QIADLEKNMSDTNA-------TDSINSQQTAETVSRAKEDQQTQLAAAQK 153

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            +     ++     M     +K+      L   ++ V  +  + ++ +      +     
Sbjct: 154 AIDDAKDAYNAQSIMWDKSEDKSDAEFQSLLAAQKAVTTAEEDYQKVLETTNRTIEDAQR 213

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                             +L++ + + +    KLT L++  E   I +P  G +      
Sbjct: 214 AV----------------ELDKYKGSDSSSKDKLTDLKEQLEDCNITAPCGGVVTAVNV- 256

Query: 307 SSSNY-AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           S  +  A    PL+ I   +    + A V    I  +++G  ATV      D        
Sbjct: 257 SVGDVNADSKTPLVTI-EDTSSLKMVATVEEADILKIEEGMKATVTADAMGDET---ING 312

Query: 366 IIEKIDPIISQQD--NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++  +  Q    +   T   Y V + +        N EL  G   +     K  
Sbjct: 313 TVTRVVRVKGQSTGSDGQTTSGGYSVEISLD-------NKELLVGMEVKAKVMIKEK 362


>gi|288962097|ref|YP_003452392.1| secretion protein HlyD [Azospirillum sp. B510]
 gi|288914363|dbj|BAI75848.1| secretion protein HlyD [Azospirillum sp. B510]
          Length = 374

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 89/298 (29%), Gaps = 27/298 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           RE Q +           + +   +     +L     ++  +  +  +   K +     +S
Sbjct: 84  RENQAVHRGDLLFRIDDEPYRLALRQADAALASARLKVEQLRADLGEALAKQAAAEEKVS 143

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q++    ++L +    ++   +     +  +  +L        +    +    D    
Sbjct: 144 FQQREFQRQQDLLKTGVAARATYDSVRHDLMAAQQDLNTEKQSVVSARAALGGDPDIP-- 201

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                             T  + ++K    ++  +   + +P  G +          YA 
Sbjct: 202 -------------TDRHPTVLEALAKKASAQRDLDHTVVAAPADGVVSQTGRLLVGQYAA 248

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--- 370
               ++ +V      ++ A      + H+  G TATV    Y+        A +E I   
Sbjct: 249 TGLSMVSLVMSGSS-WVEANFKETDLTHMAVGQTATVVLDAYSGRT---LTARVESIGAG 304

Query: 371 -----DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
                  + +Q       +    V +++   A   N + LR G  A+V      +   
Sbjct: 305 TGSEFSVLPAQNATGNWVKVVQRVPVRLRIEAADGNAVPLRTGLSADVEVDTGYSRPL 362



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 50/165 (30%), Gaps = 5/165 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + + V I    SG I +  V     + +G  L   +D      +     ++ + R  ++
Sbjct: 63  VQQDKVTISPDVSGRIVEVAVRENQAVHRGDLLFRIDDEPYRLALRQADAALASARLKVE 122

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ L     K    E+    ++ +         +  +       ++        +   
Sbjct: 123 QLRADLGEALAKQAAAEEKVSFQQREFQRQQDLLKTGVA-----ARATYDSVRHDLMAAQ 177

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + +   +  + +  + L             +     K A +Q DL
Sbjct: 178 QDLNTEKQSVVSARAALGGDPDIPTDRHPTVLEALAKKASAQRDL 222


>gi|257091586|ref|YP_003165229.1| hypothetical protein CAP2UW1_4655 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257048595|gb|ACV37782.1| hypothetical protein CAP2UW1_4655 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 542

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 99/301 (32%), Gaps = 41/301 (13%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             +E  ++       +   +  KV   G+ +    L++    +R+      D E +   +
Sbjct: 79  AVYEGEQDDEPASANQIKISTEKVQKLGVRTEAAQLRVLDKVVRAAGRIEPD-ERRIYAI 137

Query: 189 RALLSSHQKDLTMM---------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
                 + + L +          + LFE   V   +L   +R    +   +         
Sbjct: 138 SPKFEGYVERLHVNVTGQPVGKGQPLFE---VYSPELVSAQREYAIAAQGVESLKEADGP 194

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               + +L D + L   N+      D+ + Q         L    + R   T  SP++G 
Sbjct: 195 ARDGMKQLADSSLLRLKNW------DISEEQVKA------LAKSGEARRTLTFRSPVSGI 242

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +   ++          + L + V      ++ A V  + I  V+ G  A VR   Y D  
Sbjct: 243 VTEKKAL-QGMRFMPGEALYQ-VADLSAVWVVADVFEQDIGQVRTGAKAKVRINAYPD-- 298

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            K F+  I  + P ++ Q   +       V ++      ++  + L+    A+V      
Sbjct: 299 -KTFEGTISYVYPTLNAQTRTV------PVRVE-----LANPGLLLKPSMFAQVELPVGA 346

Query: 420 T 420
            
Sbjct: 347 K 347



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 69/184 (37%), Gaps = 10/184 (5%)

Query: 40  IEISVSSSGEILNEDNVV-EIKSPFSGIIKKFQVE-NGSQILQGTPLLTF---EDIETTD 94
           ++  V ++G I  ++  +  I   F G +++  V   G  + +G PL      E +    
Sbjct: 117 LDKVVRAAGRIEPDERRIYAISPKFEGYVERLHVNVTGQPVGKGQPLFEVYSPELVSAQR 176

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
              +    +++L+      +  +  L +   +  K ++  EEQ+        +  +  F 
Sbjct: 177 EYAIAAQGVESLKEADGPARDGMKQLADSSLLRLKNWDISEEQVKALAKSGEARRTLTFR 236

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +S +    K  L  MR +    L      S +  +    ++D+  ++      A ++ 
Sbjct: 237 SPVSGIVTE-KKALQGMRFMPGEALYQVADLSAVWVVADVFEQDIGQVRT----GAKAKV 291

Query: 215 DLNQ 218
            +N 
Sbjct: 292 RINA 295


>gi|218438235|ref|YP_002376564.1| chromosome segregation ATPase [Cyanothece sp. PCC 7424]
 gi|218170963|gb|ACK69696.1| chromosome segregation ATPase-like protein [Cyanothece sp. PCC
           7424]
          Length = 478

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 67/189 (35%), Gaps = 16/189 (8%)

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +K+ +  ++T ++ L  ++N+  +  K  +   E+L     + + T  ++ N      ++
Sbjct: 284 LKSAKTELETYQNELQHVHNELYLAHKELQQAHEELEKTHKELYHTHKELDNA-----HK 338

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L+    + R         +N     +  L + Q  L   +   E   +SQ  L Q +  
Sbjct: 339 ELENTQNQWRQTQSQLEISQNHLRQTQGELETSQGQLRQTQEELE---ISQGQLRQTQGE 395

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           +  S  +LR+   + +     +     +        LKE     EQ Q      + K   
Sbjct: 396 LETSQGQLRQTQGQLRQTQGQLESSQIQ--------LKEAYEQWEQTQNQLEQALEKWEK 447

Query: 283 LEKTREQKT 291
            +   +   
Sbjct: 448 AQMIIQAME 456


>gi|325275957|ref|ZP_08141795.1| RND family efflux transporter MFP subunit [Pseudomonas sp. TJI-51]
 gi|324098908|gb|EGB96916.1| RND family efflux transporter MFP subunit [Pseudomonas sp. TJI-51]
          Length = 387

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 78/205 (38%), Gaps = 7/205 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +L   + VE++    G++ +  V+ G  + QG  L T +D      +D  +  +
Sbjct: 56  ASAIGSVL-SLHSVEVRPQVEGVLTQVLVKEGQWVKQGDLLATLDDRAIQAQLDQARALL 114

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  I      L     +Y +L +      +QL       +   + V     +     
Sbjct: 115 GQSQAQIQVAAVDL----RRYRLLSRDNGVSRQQLDQQQALVNQLQATVEGNQAAIANAQ 170

Query: 164 LKMKLTRMRSIYLNRLDLENK--SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           +++  TR+RS    R+ + N    +L+R   +     +T +  +  + A+ Q  L   +R
Sbjct: 171 VQLSYTRIRSPVTGRVGIRNVDPGNLVRTSDTQGLFSVTQIDPIAVEFALPQQMLPTLQR 230

Query: 222 IVYKSTLELRENIHEQKNMLRHINE 246
           ++      L +   +       + E
Sbjct: 231 LLTAPAPALVQAYMDADGERSLLGE 255


>gi|254675265|ref|NP_958796.2| plectin isoform 1a [Mus musculus]
          Length = 4543

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1340 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1399

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1452

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1453 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1511

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1512 AELALRVKAEAEAAREKQR 1530



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2180 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2233

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2234 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2293

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2294 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2350

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2351 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2399



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1637 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1696

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1697 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1746

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1747 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1805

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1806 LAEEAKRQRQLAEED 1820



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2317 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2376

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2377 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2434

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2435 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2494

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2495 EKDSLLQRERFIEQ 2508



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2229 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2288

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2289 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2348

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2349 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2408

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2409 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2439



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1338 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1397

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1398 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1457

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1458 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1517

Query: 291  T 291
             
Sbjct: 1518 V 1518



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1257 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1312

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1313 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1372

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1373 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1432

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1433 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1483



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1548 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1607

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1608 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1667

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1668 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1727

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1728 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1771



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1453 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1506

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1507 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1564

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1565 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1622

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1623 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1654


>gi|254675201|ref|NP_958787.2| plectin isoform 1f [Mus musculus]
          Length = 4534

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1331 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1390

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1391 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1443

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1444 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1502

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1503 AELALRVKAEAEAAREKQR 1521



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2171 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2224

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2225 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2284

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2285 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2341

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2342 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2390



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1628 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1687

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1688 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1737

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1738 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1796

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1797 LAEEAKRQRQLAEED 1811



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2308 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2367

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2368 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2425

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2426 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2485

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2486 EKDSLLQRERFIEQ 2499



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2220 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2279

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2280 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2339

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2340 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2399

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2400 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2430



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1329 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1388

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1389 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1448

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1449 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1508

Query: 291  T 291
             
Sbjct: 1509 V 1509



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1248 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1303

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1304 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1363

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1364 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1423

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1424 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1474



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1539 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1598

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1599 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1658

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1659 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1718

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1719 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1762



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1444 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1497

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1498 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1555

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1556 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1613

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1614 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1645


>gi|238926589|ref|ZP_04658349.1| secretion protein HlyD [Selenomonas flueggei ATCC 43531]
 gi|238885535|gb|EEQ49173.1| secretion protein HlyD [Selenomonas flueggei ATCC 43531]
          Length = 339

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/330 (13%), Positives = 101/330 (30%), Gaps = 42/330 (12%)

Query: 99  KKVSIKNLRCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++ + + LR  + T   E + ++    +   +E+ F      +             +   
Sbjct: 33  REYAAQELRAQLLTGTVEATRVEVSTKESGCIEELFLQEGMTVRAGDPAARIGRRDLDAA 92

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLD----LENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +         + +  R+   NR +       +++  RA       D      L    A+
Sbjct: 93  VLRDEAALAHAETSLQRTQSGNRAEEIRAAAERTNAARAAAEKADADYARGAELIAGGAI 152

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           SQ   +        +   LR    EQ                           D+   + 
Sbjct: 153 SQQAFDGLREARDAANANLRAAQQEQALTESGSR-----------------PEDIRMAEE 195

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYI 330
               + + L I        T+  P  G ++  +++    + +   P+  ++ P     ++
Sbjct: 196 DVRRQQAILEIDASAVSDLTVRVPKDGIVLS-KNYERGEFVRAGTPIATLIDPQD--VWV 252

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----PIISQQDNNLQTQE 385
           +  V    +  ++ G  A V    Y D + +     I++I       +      N +   
Sbjct: 253 KVYVPTDVLGDLRIGDPAKV----YIDGQTEPLDGTIKEISDAAEFTLRQSITKNERANL 308

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + V + + + A       L+ G PA+V  
Sbjct: 309 VFGVKVAVNNAAGI-----LKPGMPADVDL 333



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 49/165 (29%), Gaps = 5/165 (3%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E   VE+ +  SG I++  ++ G  +  G P       +    +   + ++ +    +
Sbjct: 48  TVEATRVEVSTKESGCIEELFLQEGMTVRAGDPAARIGRRDLDAAVLRDEAALAHAETSL 107

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              +S      N+ + +  A E                          ++ +     L  
Sbjct: 108 QRTQSG-----NRAEEIRAAAERTNAARAAAEKADADYARGAELIAGGAISQQAFDGLRE 162

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            R      L    +   L    S  +      +++  + A+ + D
Sbjct: 163 ARDAANANLRAAQQEQALTESGSRPEDIRMAEEDVRRQQAILEID 207


>gi|217973992|ref|YP_002358743.1| secretion protein HlyD family protein [Shewanella baltica OS223]
 gi|217499127|gb|ACK47320.1| secretion protein HlyD family protein [Shewanella baltica OS223]
          Length = 383

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 61/179 (34%), Gaps = 3/179 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E + + + +P   +I +  V  G Q+  G  LLT +       + L++  ++  +  +
Sbjct: 85  TVERDRLTLTAPVGELITQVNVVEGQQVKAGEVLLTLDSTSANARLALRQAELEQAKAKL 144

Query: 111 --DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF-NYGISSVYRSLKMK 167
                 + L+ +     VL+ A  S +E    F        +KV     + +   +    
Sbjct: 145 SEAVTGARLEDIERAKAVLDGANASVKEAQRAFERTNRLYATKVLSQADLDTARAARDTS 204

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           L +      +   LEN +   +   +             E+ A++   L      V  +
Sbjct: 205 LAKQAEAEQSLRLLENGTRSEQLEQAKAAVAAASASVAIEQKALADLSLVAARDAVVDT 263



 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 50/344 (14%), Positives = 96/344 (27%), Gaps = 42/344 (12%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           ++ G  LL            L  V    L     T  + +  L  + +V+E       E 
Sbjct: 63  VVLGCLLLQLAACSQESPSVLGTVERDRL-----TLTAPVGELITQVNVVEGQQVKAGEV 117

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL       +    +    +      L   +T  R   + R   +       A +   Q+
Sbjct: 118 LLTLDSTSANARLALRQAELEQAKAKLSEAVTGARLEDIERA--KAVLDGANASVKEAQR 175

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                  L+    +SQ DL+        S  +  E     + +                 
Sbjct: 176 AFERTNRLYATKVLSQADLDTARAARDTSLAKQAEAEQSLRLLENGTR------------ 223

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                S  LEQ +   A   + + I +K     ++++     +         +       
Sbjct: 224 -----SEQLEQAKAAVAAASASVAIEQKALADLSLVAARDAVVDTLPWR-VGDRIAAGTQ 277

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------D 371
           L+ ++      Y+R  +    +  VK G +  +        RE      +  I       
Sbjct: 278 LIGLLASEDP-YVRVYLPATWLDRVKAGDSVNILVDG----REMPIAGTVRNIRSQPAYT 332

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           P  +  + +     Y      +TD+  S    +L  G    V  
Sbjct: 333 PFYALNERDRARLMY------LTDITISAEGQDLPTGMALAVEL 370


>gi|40849910|gb|AAR95667.1| plectin 2 [Mus musculus]
          Length = 4534

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1331 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1390

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1391 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1443

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1444 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1502

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1503 AELALRVKAEAEAAREKQR 1521



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2171 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2224

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2225 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2284

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2285 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2341

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2342 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEED 2390



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1628 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1687

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1688 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1737

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1738 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1796

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1797 LAEEAKRQRQLAEED 1811



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2308 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2367

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2368 AEAERLKL-RMVEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2425

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2426 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2485

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2486 EKDSLLQRERFIEQ 2499



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2220 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2279

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2280 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2339

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2340 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEEDAQRFRKQAE 2399

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2400 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2430



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1329 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1388

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1389 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1448

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1449 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1508

Query: 291  T 291
             
Sbjct: 1509 V 1509



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1248 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1303

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1304 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1363

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1364 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1423

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1424 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1474



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1539 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1598

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1599 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1658

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1659 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1718

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1719 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1762



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1444 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1497

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1498 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1555

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1556 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1613

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1614 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1645


>gi|40849928|gb|AAR95676.1| plectin 11 [Mus musculus]
          Length = 4543

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1340 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1399

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1452

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1453 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1511

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1512 AELALRVKAEAEAAREKQR 1530



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2180 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2233

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2234 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2293

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2294 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2350

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2351 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEED 2399



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1637 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1696

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1697 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1746

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1747 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1805

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1806 LAEEAKRQRQLAEED 1820



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2317 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2376

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2377 AEAERLKL-RMVEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2434

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2435 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2494

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2495 EKDSLLQRERFIEQ 2508



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2229 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2288

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2289 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2348

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2349 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEEDAQRFRKQAE 2408

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2409 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2439



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1338 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1397

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1398 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1457

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1458 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1517

Query: 291  T 291
             
Sbjct: 1518 V 1518



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1257 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1312

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1313 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1372

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1373 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1432

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1433 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1483



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1548 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1607

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1608 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1667

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1668 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1727

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1728 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1771



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1453 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1506

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1507 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1564

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1565 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1622

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1623 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1654


>gi|300694055|ref|YP_003750028.1| cation transporter transmembrane protein [Ralstonia solanacearum
           PSI07]
 gi|299076092|emb|CBJ35403.1| putative cation transporter transmembrane protein [Ralstonia
           solanacearum PSI07]
          Length = 382

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 53/340 (15%), Positives = 114/340 (33%), Gaps = 41/340 (12%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           + +K++        +      +       +  ++E              ++V     S++
Sbjct: 1   MQVKSISARRLIYGAGALAAISLAVWGAMSLHAKEAVAPQAPVSIQHEGARVIVPESSAL 60

Query: 161 YRSLKMKLTRMRSIY----LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            R+L +       +     L  +   + + L++ L     + +++ + L ++        
Sbjct: 61  RRTLAVAPVVQDQVAVPFTLPAVVEADPARLVKVLPPLTGRIVSLNRQLGDEVRAGDVLF 120

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           +     + ++T +  +         R++  L +    E A       RDLE  Q  +A  
Sbjct: 121 SIDSADLAQATSDATKAQATLALARRNLERLRELDKSEIA-----AKRDLELAQNDYAQA 175

Query: 277 MSKLTILEKTREQK--------------TILSPIAGTIVYNQSFSSSNYAQ-QSQPLMKI 321
           +S+         Q                + SPIAG +V   + +   Y    + P+M  
Sbjct: 176 VSEADRANNRLAQLGAKGGAQVTGGHILAVRSPIAGRVVDLNA-AIGGYWNDATAPVMT- 233

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V      ++ A    K +  V  G  ATV+   YAD       A +  +  I+       
Sbjct: 234 VADLSRVFVTASAQEKDLAQVYVGQAATVKLDAYAD----ALPAKVRLVGEILDPDTRT- 288

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                  V ++   + F + +  L+ G  A+  F A+  T
Sbjct: 289 -------VKVR---MVFDNRDGRLKPGMFAQATFLARPHT 318



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 42/126 (33%), Gaps = 3/126 (2%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTE 113
            +V++  P +G I     + G ++  G  L + +  +      D  K          + E
Sbjct: 90  RLVKVLPPLTGRIVSLNRQLGDEVRAGDVLFSIDSADLAQATSDATKAQATLALARRNLE 149

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +  L  L+      ++  E  +      + +     +++   G     +     +  +RS
Sbjct: 150 R--LRELDKSEIAAKRDLELAQNDYAQAVSEADRANNRLAQLGAKGGAQVTGGHILAVRS 207

Query: 174 IYLNRL 179
               R+
Sbjct: 208 PIAGRV 213


>gi|256418964|ref|NP_958788.2| plectin isoform 1e [Mus musculus]
          Length = 4521

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1318 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1377

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1378 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1430

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1431 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1489

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1490 AELALRVKAEAEAAREKQR 1508



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2158 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2211

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2212 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2271

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2272 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2328

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2329 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2377



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1615 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1674

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1675 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1724

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1725 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1783

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1784 LAEEAKRQRQLAEED 1798



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2295 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2354

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2355 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2412

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2413 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2472

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2473 EKDSLLQRERFIEQ 2486



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2207 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2266

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2267 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2326

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2327 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2386

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2387 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2417



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1316 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1375

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1376 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1435

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1436 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1495

Query: 291  T 291
             
Sbjct: 1496 V 1496



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1235 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1290

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1291 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1350

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1351 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1410

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1411 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1461



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1526 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1585

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1586 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1645

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1646 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1705

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1706 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1749



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1431 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1484

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1485 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1542

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1543 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1600

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1601 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1632


>gi|254675251|ref|NP_958792.2| plectin isoform 1d [Mus musculus]
          Length = 4511

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1308 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1367

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1368 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1420

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1421 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1479

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1480 AELALRVKAEAEAAREKQR 1498



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2148 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2201

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2202 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2261

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2262 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2318

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2319 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2367



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1605 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1664

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1665 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1714

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1715 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1773

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1774 LAEEAKRQRQLAEED 1788



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2285 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2344

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2345 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2402

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2403 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2462

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2463 EKDSLLQRERFIEQ 2476



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2197 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2256

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2257 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2316

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2317 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2376

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2377 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2407



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1306 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1365

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1366 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1425

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1426 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1485

Query: 291  T 291
             
Sbjct: 1486 V 1486



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1225 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1280

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1281 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1340

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1341 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1400

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1401 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1451



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1516 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1575

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1576 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1635

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1636 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1695

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1696 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1739



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1421 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1474

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1475 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1532

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1533 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1590

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1591 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1622


>gi|254675195|ref|NP_035247.2| plectin isoform 1c [Mus musculus]
          Length = 4572

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1369 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1428

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1429 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1481

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1482 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1540

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1541 AELALRVKAEAEAAREKQR 1559



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2209 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2262

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2263 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2322

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2323 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2379

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2380 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2428



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1666 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1725

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1726 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1775

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1776 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1834

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1835 LAEEAKRQRQLAEED 1849



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2346 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2405

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2406 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2463

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2464 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2523

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2524 EKDSLLQRERFIEQ 2537



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2258 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2317

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2318 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2377

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2378 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2437

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2438 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2468



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1367 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1426

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1427 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1486

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1487 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1546

Query: 291  T 291
             
Sbjct: 1547 V 1547



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1286 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1341

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1342 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1401

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1402 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1461

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1462 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1512



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1577 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1636

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1637 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1696

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1697 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1756

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1757 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1800



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1482 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1535

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1536 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1593

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1594 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1651

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1652 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1683


>gi|40849908|gb|AAR95666.1| plectin 1 [Mus musculus]
          Length = 4572

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1369 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1428

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1429 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1481

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1482 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1540

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1541 AELALRVKAEAEAAREKQR 1559



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2209 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2262

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2263 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2322

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2323 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2379

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2380 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEED 2428



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1666 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1725

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1726 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1775

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1776 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1834

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1835 LAEEAKRQRQLAEED 1849



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2346 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2405

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2406 AEAERLKL-RMVEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2463

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2464 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2523

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2524 EKDSLLQRERFIEQ 2537



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2258 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2317

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2318 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2377

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2378 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEEDAQRFRKQAE 2437

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2438 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2468



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1367 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1426

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1427 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1486

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1487 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1546

Query: 291  T 291
             
Sbjct: 1547 V 1547



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1286 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1341

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1342 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1401

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1402 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1461

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1462 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1512



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1577 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1636

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1637 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1696

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1697 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1756

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1757 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1800



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1482 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1535

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1536 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1593

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1594 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1651

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1652 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1683


>gi|40849912|gb|AAR95668.1| plectin 3 [Mus musculus]
          Length = 4521

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1318 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1377

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1378 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1430

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1431 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1489

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1490 AELALRVKAEAEAAREKQR 1508



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2158 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2211

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2212 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2271

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2272 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2328

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2329 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEED 2377



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1615 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1674

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1675 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1724

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1725 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1783

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1784 LAEEAKRQRQLAEED 1798



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2295 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2354

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2355 AEAERLKL-RMVEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2412

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2413 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2472

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2473 EKDSLLQRERFIEQ 2486



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2207 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2266

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2267 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2326

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2327 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEEDAQRFRKQAE 2386

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2387 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2417



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1316 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1375

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1376 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1435

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1436 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1495

Query: 291  T 291
             
Sbjct: 1496 V 1496



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1235 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1290

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1291 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1350

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1351 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1410

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1411 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1461



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1526 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1585

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1586 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1645

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1646 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1705

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1706 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1749



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1431 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1484

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1485 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1542

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1543 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1600

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1601 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1632


>gi|40849920|gb|AAR95672.1| plectin 7 [Mus musculus]
          Length = 4511

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1308 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1367

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1368 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1420

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1421 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1479

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1480 AELALRVKAEAEAAREKQR 1498



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2148 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2201

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2202 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2261

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2262 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2318

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2319 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEED 2367



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1605 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1664

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1665 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1714

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1715 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1773

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1774 LAEEAKRQRQLAEED 1788



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2285 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2344

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2345 AEAERLKL-RMVEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2402

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2403 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2462

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2463 EKDSLLQRERFIEQ 2476



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2197 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2256

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2257 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2316

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2317 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEEDAQRFRKQAE 2376

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2377 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2407



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1306 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1365

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1366 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1425

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1426 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1485

Query: 291  T 291
             
Sbjct: 1486 V 1486



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1225 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1280

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1281 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1340

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1341 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1400

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1401 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1451



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1516 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1575

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1576 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1635

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1636 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1695

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1696 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1739



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1421 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1474

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1475 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1532

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1533 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1590

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1591 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1622


>gi|73974716|ref|XP_857167.1| PREDICTED: similar to plectin 1 isoform 1 isoform 4 [Canis
            familiaris]
          Length = 4587

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1383 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1442

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1443 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKARQVEAAERSRVRIEEEIR------- 1495

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1496 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1554

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1555 AELALRVKAEAEAAREKQR 1573



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 11/226 (4%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2223 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRNQVEEELFSVRVQ 2276

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2277 MEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQL 2336

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++DL   + L EK    +    Q+   +      L++     +   R + E  ++   +
Sbjct: 2337 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKEQMAQQ 2396

Query: 255  FANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             A   +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2397 LAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2442



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2272 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2331

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2332 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKE 2391

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2392 QMAQQLAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2451

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2452 EIGEKLHRTELATQEKVTLVHTLEIQRQQSD 2482



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 58/204 (28%), Gaps = 7/204 (3%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  +   +  L                + + L +   + E + L  +        ++  
Sbjct: 1358 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1417

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  ++ +      R +       E  +   +    S Q++L  ++   E    ++ 
Sbjct: 1418 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1477

Query: 215  D-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLE 267
              +   ER   +   E+R    + +   R       E         E     ++   + E
Sbjct: 1478 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAE 1537

Query: 268  QNQRTFADEMSKLTILEKTREQKT 291
            + +R   DE  +    E     + 
Sbjct: 1538 RLRRQVQDESQRKRQAEAELALRV 1561



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/229 (10%), Positives = 72/229 (31%), Gaps = 16/229 (6%)

Query: 75   GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNKYD 125
            G ++ +   L      +  + I   ++ +   +  ++           +S  + +  +Y 
Sbjct: 1302 GEKVDECQQLAK----QYINAIKDYELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYV 1357

Query: 126  VLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLEN 183
             L   +         ++     T  ++              + +L  + +    +  L  
Sbjct: 1358 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1417

Query: 184  KSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +     
Sbjct: 1418 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1477

Query: 243  HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1478 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAE 1526



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 65/191 (34%), Gaps = 2/191 (1%)

Query: 89   DIETTDLIDLKKVSIKNL-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +E +   +  K+ +  + R     E+ A  F     ++ EK   +           +  
Sbjct: 2415 QLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVHTL 2474

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +  +   +   R+   +L R +        L  + S     +   ++ L   + L E
Sbjct: 2475 EIQRQQSDHDAERLRAAITELEREKEKLQEEATLLQQKSE-EMQVVQQEQLLQETRALQE 2533

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                 ++ L Q+ER + +   +L +   ++    + + E       +     +++   +E
Sbjct: 2534 SFLSEKDRLLQRERFIEQEKAKLEQLFRDEVAKAQKLREEQQRQQQQMEQEREQLVASME 2593

Query: 268  QNQRTFADEMS 278
            + ++   +   
Sbjct: 2594 EARQCQREAEE 2604



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1591 RLRQAEADRARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEA 1650

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  R+++    RL L+ +    +  L+  + +    +  
Sbjct: 1651 ERRAQQQAEAERAREEAEQELERWRLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1710

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ ++     +   A  E   
Sbjct: 1711 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLVAEQELIRLRAETEQGE 1766

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1767 QQRQLLEEELARLQREAAAATHKRQELEAELAK 1799



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1496 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1549

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1550 KRQAEAE--LALRVKAEAEAAREKQRALQALEDVRLQAEEAERRLRQAEADRARQVQVAL 1607

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1608 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEAERRAQQQAEAERARE 1665

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  ++LE+ +    + +      E+  +QK++
Sbjct: 1666 EAEQELERWRLKANEALRLRLQAEEVAQQKSL 1697



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 63/185 (34%), Gaps = 13/185 (7%)

Query: 125  DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + L    ++ E      L +  +   K      +      + +  R R +    L+ + +
Sbjct: 1680 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1739

Query: 185  SSLLRALLSS-HQKDLTMMKNLFEKNAVSQN----DLNQQERIVYKS-------TLELRE 232
             +   A      +++L  ++   E+    +     +L + +R    +         EL +
Sbjct: 1740 LAEGTAQQRLVAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATHKRQELEAELAK 1799

Query: 233  NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               E + +L       +E+        + +  +     R  A+E ++L  L +  +++  
Sbjct: 1800 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-ASRFRELAEEAARLRALAEETKRQRQ 1858

Query: 293  LSPIA 297
            L+   
Sbjct: 1859 LAEED 1863


>gi|73974718|ref|XP_857213.1| PREDICTED: similar to plectin 1 isoform 1 isoform 5 [Canis
            familiaris]
          Length = 4549

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1345 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1404

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1405 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKARQVEAAERSRVRIEEEIR------- 1457

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1458 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1516

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1517 AELALRVKAEAEAAREKQR 1535



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 11/226 (4%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2185 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRNQVEEELFSVRVQ 2238

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2239 MEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQL 2298

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++DL   + L EK    +    Q+   +      L++     +   R + E  ++   +
Sbjct: 2299 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKEQMAQQ 2358

Query: 255  FANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             A   +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2359 LAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2404



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2234 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2293

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2294 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKE 2353

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2354 QMAQQLAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2413

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2414 EIGEKLHRTELATQEKVTLVHTLEIQRQQSD 2444



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 58/204 (28%), Gaps = 7/204 (3%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  +   +  L                + + L +   + E + L  +        ++  
Sbjct: 1320 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1379

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  ++ +      R +       E  +   +    S Q++L  ++   E    ++ 
Sbjct: 1380 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1439

Query: 215  D-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLE 267
              +   ER   +   E+R    + +   R       E         E     ++   + E
Sbjct: 1440 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAE 1499

Query: 268  QNQRTFADEMSKLTILEKTREQKT 291
            + +R   DE  +    E     + 
Sbjct: 1500 RLRRQVQDESQRKRQAEAELALRV 1523



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/229 (10%), Positives = 72/229 (31%), Gaps = 16/229 (6%)

Query: 75   GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNKYD 125
            G ++ +   L      +  + I   ++ +   +  ++           +S  + +  +Y 
Sbjct: 1264 GEKVDECQQLAK----QYINAIKDYELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYV 1319

Query: 126  VLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLEN 183
             L   +         ++     T  ++              + +L  + +    +  L  
Sbjct: 1320 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1379

Query: 184  KSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +     
Sbjct: 1380 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1439

Query: 243  HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1440 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAE 1488



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 65/191 (34%), Gaps = 2/191 (1%)

Query: 89   DIETTDLIDLKKVSIKNL-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +E +   +  K+ +  + R     E+ A  F     ++ EK   +           +  
Sbjct: 2377 QLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVHTL 2436

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +  +   +   R+   +L R +        L  + S     +   ++ L   + L E
Sbjct: 2437 EIQRQQSDHDAERLRAAITELEREKEKLQEEATLLQQKSE-EMQVVQQEQLLQETRALQE 2495

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                 ++ L Q+ER + +   +L +   ++    + + E       +     +++   +E
Sbjct: 2496 SFLSEKDRLLQRERFIEQEKAKLEQLFRDEVAKAQKLREEQQRQQQQMEQEREQLVASME 2555

Query: 268  QNQRTFADEMS 278
            + ++   +   
Sbjct: 2556 EARQCQREAEE 2566



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1553 RLRQAEADRARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEA 1612

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  R+++    RL L+ +    +  L+  + +    +  
Sbjct: 1613 ERRAQQQAEAERAREEAEQELERWRLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1672

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ ++     +   A  E   
Sbjct: 1673 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLVAEQELIRLRAETEQGE 1728

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1729 QQRQLLEEELARLQREAAAATHKRQELEAELAK 1761



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1458 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1511

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1512 KRQAEAE--LALRVKAEAEAAREKQRALQALEDVRLQAEEAERRLRQAEADRARQVQVAL 1569

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1570 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEAERRAQQQAEAERARE 1627

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  ++LE+ +    + +      E+  +QK++
Sbjct: 1628 EAEQELERWRLKANEALRLRLQAEEVAQQKSL 1659



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 63/185 (34%), Gaps = 13/185 (7%)

Query: 125  DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + L    ++ E      L +  +   K      +      + +  R R +    L+ + +
Sbjct: 1642 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1701

Query: 185  SSLLRALLSS-HQKDLTMMKNLFEKNAVSQN----DLNQQERIVYKS-------TLELRE 232
             +   A      +++L  ++   E+    +     +L + +R    +         EL +
Sbjct: 1702 LAEGTAQQRLVAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATHKRQELEAELAK 1761

Query: 233  NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               E + +L       +E+        + +  +     R  A+E ++L  L +  +++  
Sbjct: 1762 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-ASRFRELAEEAARLRALAEETKRQRQ 1820

Query: 293  LSPIA 297
            L+   
Sbjct: 1821 LAEED 1825


>gi|46198955|ref|YP_004622.1| hypothetical protein TTC0647 [Thermus thermophilus HB27]
 gi|46196579|gb|AAS80995.1| hypothetical conserved protein [Thermus thermophilus HB27]
          Length = 437

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 85/266 (31%), Gaps = 26/266 (9%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +++  +     + + S+  +    E   +  +  L + +++L   + ++E    S+
Sbjct: 107 RRQEANLENARLQGQSALASLTASVKSAEIAYANAKQDLETARRNLEATRIVYEAGGTSR 166

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            DL   E     +   L           + +N        +    L+ +   L Q Q T 
Sbjct: 167 QDLLAAEAAYAAAERALENAEAALAAQRKALNLR----EAQLQKELEALQEALRQAQLTL 222

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A     L  +E       + +P +G ++  ++ S          L+ +   S    +  +
Sbjct: 223 ASAREDLEAVE-------VKAPFSGVVLSQEA-SLGAQVSPETALLTLGDLSAFRLV-LQ 273

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V   +I  V+ G    V             +  +    P     +N       +EV +++
Sbjct: 274 VDETEIGKVQVGQKVAVTLDGLPGET---LEGEVVAKSPEAELVNNI----PVFEVTVRL 326

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN 419
                   +  LR G  A+     + 
Sbjct: 327 ------PADPRLRPGMSADGEIVVQE 346


>gi|15598598|ref|NP_252092.1| hypothetical protein PA3402 [Pseudomonas aeruginosa PAO1]
 gi|116051420|ref|YP_789747.1| hypothetical protein PA14_20080 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890399|ref|YP_002439263.1| hypothetical protein PLES_16591 [Pseudomonas aeruginosa LESB58]
 gi|254236360|ref|ZP_04929683.1| hypothetical protein PACG_02335 [Pseudomonas aeruginosa C3719]
 gi|254242087|ref|ZP_04935409.1| hypothetical protein PA2G_02815 [Pseudomonas aeruginosa 2192]
 gi|296388084|ref|ZP_06877559.1| hypothetical protein PaerPAb_08009 [Pseudomonas aeruginosa PAb1]
 gi|313108755|ref|ZP_07794747.1| putative membrane protein [Pseudomonas aeruginosa 39016]
 gi|9949539|gb|AAG06790.1|AE004761_6 hypothetical protein PA3402 [Pseudomonas aeruginosa PAO1]
 gi|115586641|gb|ABJ12656.1| putative membrane protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126168291|gb|EAZ53802.1| hypothetical protein PACG_02335 [Pseudomonas aeruginosa C3719]
 gi|126195465|gb|EAZ59528.1| hypothetical protein PA2G_02815 [Pseudomonas aeruginosa 2192]
 gi|218770622|emb|CAW26387.1| putative membrane protein [Pseudomonas aeruginosa LESB58]
 gi|310881249|gb|EFQ39843.1| putative membrane protein [Pseudomonas aeruginosa 39016]
          Length = 323

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 99/366 (27%), Gaps = 92/366 (25%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           ++             G ++   V  G ++ QG  L++ +  E              L   
Sbjct: 40  VIVSSKAK-------GRVQVLHVRRGDEVKQGDLLISLDSPE--------------LEAQ 78

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +D                                          +   +     L   L 
Sbjct: 79  LDA----------------------------------------LHAARNQAQAQLDESLH 98

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN--DLNQQERIVYKST 227
             R    +   L+   +   A L + + D    + + E+  +S+   DL+++ER V +  
Sbjct: 99  GTR--EESIRALKASLAQAEAELRNAESDFQRNQQMVERGFLSRTQFDLSRRERDVARDR 156

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           +        + N+   +    +E        ++     + + Q    D            
Sbjct: 157 VA-----EARANLDEGLKGDREERRQALQAAVRRADAQIAELQAQIDDL----------- 200

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGY 346
               + +P+ G +    +           PL+ +V      ++      + I   V+KG 
Sbjct: 201 ---QVRAPVNGEVGPIPA-EQGELINAYSPLLTLVRLDDSYFV--FNLREDILAKVRKGD 254

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNNIEL 405
              ++ P        + +  +  I P+              +++    T          L
Sbjct: 255 RIVMQVPGLGGA---EVETELRYIAPLGDFSTRRATRATGDFDLKTFETRFYPLQPTPGL 311

Query: 406 RNGFPA 411
           R G  A
Sbjct: 312 RPGMSA 317


>gi|323976819|gb|EGB71907.1| HlyD family protein secretion protein [Escherichia coli TW10509]
          Length = 331

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLVAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLVAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|254675117|ref|NP_001157014.1| plectin isoform 1c2alpha3alpha [Mus musculus]
          Length = 4589

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1386 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1445

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1446 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1498

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1499 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1557

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1558 AELALRVKAEAEAAREKQR 1576



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2226 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2279

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2280 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2339

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2340 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2396

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2397 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2445



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1683 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1742

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1743 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1792

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1793 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1851

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1852 LAEEAKRQRQLAEED 1866



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2363 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2422

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2423 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2480

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2481 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2540

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2541 EKDSLLQRERFIEQ 2554



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2275 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2334

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2335 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2394

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2395 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2454

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2455 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2485



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1384 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1443

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1444 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1503

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1504 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1563

Query: 291  T 291
             
Sbjct: 1564 V 1564



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1303 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1358

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1359 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1418

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1419 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1478

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1479 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1529



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1594 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1653

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1654 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1713

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1714 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1773

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1774 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1817



 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1499 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1552

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1553 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1610

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1611 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1668

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1669 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1700


>gi|148697587|gb|EDL29534.1| plectin 1, isoform CRA_b [Mus musculus]
          Length = 4584

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1381 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1440

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1441 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1493

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1494 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1552

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1553 AELALRVKAEAEAAREKQR 1571



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2221 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2274

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2275 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2334

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2335 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2391

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2392 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2440



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1678 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1737

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1738 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1787

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1788 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1846

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1847 LAEEAKRQRQLAEED 1861



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2358 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2417

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2418 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2475

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2476 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2535

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2536 EKDSLLQRERFIEQ 2549



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2270 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2329

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2330 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2389

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2390 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2449

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2450 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2480



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1379 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1438

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1439 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1498

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1499 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1558

Query: 291  T 291
             
Sbjct: 1559 V 1559



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1298 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1353

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1354 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1413

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1414 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1473

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1474 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1524



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1589 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1648

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1649 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1708

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1709 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1768

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1769 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1812



 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1494 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1547

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1548 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1605

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1606 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1663

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1664 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1695


>gi|148697586|gb|EDL29533.1| plectin 1, isoform CRA_a [Mus musculus]
          Length = 4572

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1369 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1428

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1429 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1481

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1482 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1540

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1541 AELALRVKAEAEAAREKQR 1559



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2209 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2262

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2263 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2322

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2323 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2379

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2380 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2428



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1666 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1725

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1726 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1775

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1776 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1834

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1835 LAEEAKRQRQLAEED 1849



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2346 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2405

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2406 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2463

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2464 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2523

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2524 EKDSLLQRERFIEQ 2537



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2258 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2317

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2318 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2377

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2378 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2437

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2438 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2468



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1367 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1426

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1427 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1486

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1487 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1546

Query: 291  T 291
             
Sbjct: 1547 V 1547



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1286 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1341

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1342 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1401

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1402 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1461

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1462 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1512



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1577 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1636

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1637 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1696

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1697 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1756

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1757 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1800



 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1482 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1535

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1536 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1593

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1594 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1651

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1652 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1683


>gi|167036254|ref|YP_001671485.1| secretion protein HlyD family protein [Pseudomonas putida GB-1]
 gi|166862742|gb|ABZ01150.1| secretion protein HlyD family protein [Pseudomonas putida GB-1]
          Length = 319

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 83/302 (27%), Gaps = 24/302 (7%)

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +   + L       E   +    K     ++V       V R   +     R++   R  
Sbjct: 31  DQLPEGLSMGNGRLEATEVQIASKIPGRLAEVLVDEGDKVTRGQLLARIDTRTMEAQRSQ 90

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            E +    R   ++ Q               +   L Q E ++    L+    I ++K  
Sbjct: 91  AEAEVLRARENYAAAQ---------------ASVQLRQSELLLASQELKRVREIFQRKYA 135

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            + + +            +      L   +       +++  L    +  ++ +PI G I
Sbjct: 136 SQQLLDQQQARFDTANAAVVAARAQLAAIKAAIGAAEAQVAQLTSEIDDSSLRAPIDGII 195

Query: 301 VYNQSFSSSNYAQQ-SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
              +            + LM I P  +   +   +       +  G  A +      +  
Sbjct: 196 Q-LRLAEPGEVLGAGGRVLMLIDPSDQYMNL--YLPASTSGQLTVGDQARIVLDALPERA 252

Query: 360 EKKFKAIIEKIDPIISQQ--DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                A +        +Q    + + +  + V L++TD          + G P       
Sbjct: 253 LPAKVAFVAAKAQFTPKQVETRDERQKLVFRVKLRLTDPGVVPQA---KPGMPGAGYVRT 309

Query: 418 KN 419
             
Sbjct: 310 AE 311



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/149 (10%), Positives = 45/149 (30%), Gaps = 2/149 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V+ G ++ +G  L   +           +  +   R +    ++++    ++ 
Sbjct: 57  GRLAEVLVDEGDKVTRGQLLARIDTRTMEAQRSQAEAEVLRARENYAAAQASVQLRQSEL 116

Query: 125 DVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            +  +  +   E  Q      +        F+   ++V  +         +I      + 
Sbjct: 117 LLASQELKRVREIFQRKYASQQLLDQQQARFDTANAAVVAARAQLAAIKAAIGAAEAQVA 176

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             +S +         D  +   L E   V
Sbjct: 177 QLTSEIDDSSLRAPIDGIIQLRLAEPGEV 205


>gi|82702551|ref|YP_412117.1| secretion protein HlyD [Nitrosospira multiformis ATCC 25196]
 gi|82410616|gb|ABB74725.1| Secretion protein HlyD [Nitrosospira multiformis ATCC 25196]
          Length = 359

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 54/355 (15%), Positives = 103/355 (29%), Gaps = 86/355 (24%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I + +VE G ++  G  L                  +      +   ++       +  
Sbjct: 73  RIAEMRVEEGDRVRAGQVL----------------AKLDTRILTLQIAQAEAQVAAQEQA 116

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +L     +R E++     +  S  +                     R      +++E+ S
Sbjct: 117 LLRLENGTRPEEIAQAKAEVASAQADA----------------DLARQFLGRLMEIESDS 160

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                                   AVSQ DL+                   ++  +  + 
Sbjct: 161 GA----------------------AVSQQDLDNAR--------------SRRRVAVAQLE 184

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                  L      KE   D+ Q +       ++L +L    +   + SPI   I  ++ 
Sbjct: 185 NRKKALQLALIGPRKE---DIAQAEAQLNVFRAELALLRHQLDLAELKSPIDAVI-RSRL 240

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
               + A   +P+   +  +   ++RA V+   +  +K G  A V         E+    
Sbjct: 241 LEPGDMASPQRPV-YALAITDPKWVRAYVSEIDLGRIKLGMRAEV---VTDSHPEESIHG 296

Query: 366 IIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            I  I          +QT+E      YE+ + + D         LR G PA V  
Sbjct: 297 RIGYISSAAEFTPKPVQTEELRTSLVYEIRVYVEDAED-----RLRLGMPATVHI 346


>gi|73974712|ref|XP_848799.1| PREDICTED: similar to plectin 1 isoform 1 isoform 2 [Canis
            familiaris]
          Length = 4570

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1366 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1425

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1426 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKARQVEAAERSRVRIEEEIR------- 1478

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1479 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1537

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1538 AELALRVKAEAEAAREKQR 1556



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 11/226 (4%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2206 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRNQVEEELFSVRVQ 2259

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2260 MEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQL 2319

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++DL   + L EK    +    Q+   +      L++     +   R + E  ++   +
Sbjct: 2320 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKEQMAQQ 2379

Query: 255  FANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             A   +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2380 LAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2425



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2255 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2314

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2315 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKE 2374

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2375 QMAQQLAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2434

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2435 EIGEKLHRTELATQEKVTLVHTLEIQRQQSD 2465



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 58/204 (28%), Gaps = 7/204 (3%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  +   +  L                + + L +   + E + L  +        ++  
Sbjct: 1341 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1400

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  ++ +      R +       E  +   +    S Q++L  ++   E    ++ 
Sbjct: 1401 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1460

Query: 215  D-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLE 267
              +   ER   +   E+R    + +   R       E         E     ++   + E
Sbjct: 1461 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAE 1520

Query: 268  QNQRTFADEMSKLTILEKTREQKT 291
            + +R   DE  +    E     + 
Sbjct: 1521 RLRRQVQDESQRKRQAEAELALRV 1544



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/229 (10%), Positives = 72/229 (31%), Gaps = 16/229 (6%)

Query: 75   GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNKYD 125
            G ++ +   L      +  + I   ++ +   +  ++           +S  + +  +Y 
Sbjct: 1285 GEKVDECQQLAK----QYINAIKDYELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYV 1340

Query: 126  VLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLEN 183
             L   +         ++     T  ++              + +L  + +    +  L  
Sbjct: 1341 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1400

Query: 184  KSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +     
Sbjct: 1401 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1460

Query: 243  HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1461 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAE 1509



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 65/191 (34%), Gaps = 2/191 (1%)

Query: 89   DIETTDLIDLKKVSIKNL-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +E +   +  K+ +  + R     E+ A  F     ++ EK   +           +  
Sbjct: 2398 QLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVHTL 2457

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +  +   +   R+   +L R +        L  + S     +   ++ L   + L E
Sbjct: 2458 EIQRQQSDHDAERLRAAITELEREKEKLQEEATLLQQKSE-EMQVVQQEQLLQETRALQE 2516

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                 ++ L Q+ER + +   +L +   ++    + + E       +     +++   +E
Sbjct: 2517 SFLSEKDRLLQRERFIEQEKAKLEQLFRDEVAKAQKLREEQQRQQQQMEQEREQLVASME 2576

Query: 268  QNQRTFADEMS 278
            + ++   +   
Sbjct: 2577 EARQCQREAEE 2587



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1574 RLRQAEADRARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEA 1633

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  R+++    RL L+ +    +  L+  + +    +  
Sbjct: 1634 ERRAQQQAEAERAREEAEQELERWRLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1693

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ ++     +   A  E   
Sbjct: 1694 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLVAEQELIRLRAETEQGE 1749

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1750 QQRQLLEEELARLQREAAAATHKRQELEAELAK 1782



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1479 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1532

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1533 KRQAEAE--LALRVKAEAEAAREKQRALQALEDVRLQAEEAERRLRQAEADRARQVQVAL 1590

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1591 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEAERRAQQQAEAERARE 1648

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  ++LE+ +    + +      E+  +QK++
Sbjct: 1649 EAEQELERWRLKANEALRLRLQAEEVAQQKSL 1680



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 63/185 (34%), Gaps = 13/185 (7%)

Query: 125  DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + L    ++ E      L +  +   K      +      + +  R R +    L+ + +
Sbjct: 1663 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1722

Query: 185  SSLLRALLSS-HQKDLTMMKNLFEKNAVSQN----DLNQQERIVYKS-------TLELRE 232
             +   A      +++L  ++   E+    +     +L + +R    +         EL +
Sbjct: 1723 LAEGTAQQRLVAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATHKRQELEAELAK 1782

Query: 233  NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               E + +L       +E+        + +  +     R  A+E ++L  L +  +++  
Sbjct: 1783 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-ASRFRELAEEAARLRALAEETKRQRQ 1841

Query: 293  LSPIA 297
            L+   
Sbjct: 1842 LAEED 1846


>gi|226946443|ref|YP_002801516.1| multidrug efflux pump membrane fusion protein [Azotobacter
           vinelandii DJ]
 gi|226721370|gb|ACO80541.1| multidrug efflux pump membrane fusion protein [Azotobacter
           vinelandii DJ]
          Length = 377

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 55/411 (13%), Positives = 125/411 (30%), Gaps = 100/411 (24%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +R    ++  I+  + W +    +     + +   E  VV +    +G +    V +   
Sbjct: 26  RRGVRWTLALIVLSLLWYLFA--DRYTPYTQQARVEALVVGVAPEVAGRVIGVAVRDNQH 83

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L   +       ++  +  ++N+R  +    + +D                   
Sbjct: 84  VEAGQLLFELDPEPYRIAVERARAELENVRRQVGAGTAGIDAALAGLRA----------- 132

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                 + +   ++  +  +  +YR     ++ +R + + R  LE   S + A  +  Q+
Sbjct: 133 -----AQANEVKARQDSERLERLYREDPGTIS-LRRLEVARATLEQAVSQVAAAHAEVQR 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                               +QE        +LR                          
Sbjct: 187 A------------------REQEGGSGADNAQLRS------------------------- 203

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                +  LEQ +R  A                 + +  AG I   ++     YA   + 
Sbjct: 204 ----AAAALEQAERDLA--------------NTRVRASSAGLITDLRA-EVGQYAGAGKA 244

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID------ 371
           ++ ++      +I A++T   + H++ G    +            F+  +  I       
Sbjct: 245 VLTLIAIDD-LWISAEMTENNLGHLEPGTPVAIVLDALPGT---LFEGRVRSIGFGVGVG 300

Query: 372 --------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
                   P +  + + L+  + + VI++      SD    LR G  AEV+
Sbjct: 301 QDNPPGSLPTVQNERDWLRAAQRFPVIVEFAPGELSDRR-ALRIGGQAEVM 350


>gi|325121593|gb|ADY81116.1| putative protein secretion efflux system, membrane fusion protein
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 64

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 7/59 (11%)

Query: 382 QTQEYYEVILKITDLAFSDNN---IELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
           Q Q YY V ++       +       +  G  A V       T+   ++ P    + K 
Sbjct: 3   QDQFYYRVYIRTDSDKLYNKEGKAFGITPGMVATVDIRTGQKTVLDYLLKP----FNKA 57


>gi|73974724|ref|XP_857335.1| PREDICTED: similar to plectin 1 isoform 1 isoform 8 [Canis
            familiaris]
          Length = 4544

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1340 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1399

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKARQVEAAERSRVRIEEEIR------- 1452

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1453 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1511

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1512 AELALRVKAEAEAAREKQR 1530



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 11/226 (4%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2180 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRNQVEEELFSVRVQ 2233

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2234 MEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQL 2293

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++DL   + L EK    +    Q+   +      L++     +   R + E  ++   +
Sbjct: 2294 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKEQMAQQ 2353

Query: 255  FANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             A   +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2354 LAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2399



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2229 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2288

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2289 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKE 2348

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2349 QMAQQLAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2408

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2409 EIGEKLHRTELATQEKVTLVHTLEIQRQQSD 2439



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 58/204 (28%), Gaps = 7/204 (3%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  +   +  L                + + L +   + E + L  +        ++  
Sbjct: 1315 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1374

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  ++ +      R +       E  +   +    S Q++L  ++   E    ++ 
Sbjct: 1375 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1434

Query: 215  D-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLE 267
              +   ER   +   E+R    + +   R       E         E     ++   + E
Sbjct: 1435 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAE 1494

Query: 268  QNQRTFADEMSKLTILEKTREQKT 291
            + +R   DE  +    E     + 
Sbjct: 1495 RLRRQVQDESQRKRQAEAELALRV 1518



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/229 (10%), Positives = 72/229 (31%), Gaps = 16/229 (6%)

Query: 75   GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNKYD 125
            G ++ +   L      +  + I   ++ +   +  ++           +S  + +  +Y 
Sbjct: 1259 GEKVDECQQLAK----QYINAIKDYELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYV 1314

Query: 126  VLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLEN 183
             L   +         ++     T  ++              + +L  + +    +  L  
Sbjct: 1315 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1374

Query: 184  KSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +     
Sbjct: 1375 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1434

Query: 243  HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1435 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAE 1483



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 65/191 (34%), Gaps = 2/191 (1%)

Query: 89   DIETTDLIDLKKVSIKNL-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +E +   +  K+ +  + R     E+ A  F     ++ EK   +           +  
Sbjct: 2372 QLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVHTL 2431

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +  +   +   R+   +L R +        L  + S     +   ++ L   + L E
Sbjct: 2432 EIQRQQSDHDAERLRAAITELEREKEKLQEEATLLQQKSE-EMQVVQQEQLLQETRALQE 2490

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                 ++ L Q+ER + +   +L +   ++    + + E       +     +++   +E
Sbjct: 2491 SFLSEKDRLLQRERFIEQEKAKLEQLFRDEVAKAQKLREEQQRQQQQMEQEREQLVASME 2550

Query: 268  QNQRTFADEMS 278
            + ++   +   
Sbjct: 2551 EARQCQREAEE 2561



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1548 RLRQAEADRARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEA 1607

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  R+++    RL L+ +    +  L+  + +    +  
Sbjct: 1608 ERRAQQQAEAERAREEAEQELERWRLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1667

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ ++     +   A  E   
Sbjct: 1668 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLVAEQELIRLRAETEQGE 1723

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1724 QQRQLLEEELARLQREAAAATHKRQELEAELAK 1756



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1453 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1506

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1507 KRQAEAE--LALRVKAEAEAAREKQRALQALEDVRLQAEEAERRLRQAEADRARQVQVAL 1564

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1565 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEAERRAQQQAEAERARE 1622

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  ++LE+ +    + +      E+  +QK++
Sbjct: 1623 EAEQELERWRLKANEALRLRLQAEEVAQQKSL 1654



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 63/185 (34%), Gaps = 13/185 (7%)

Query: 125  DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + L    ++ E      L +  +   K      +      + +  R R +    L+ + +
Sbjct: 1637 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1696

Query: 185  SSLLRALLSS-HQKDLTMMKNLFEKNAVSQN----DLNQQERIVYKS-------TLELRE 232
             +   A      +++L  ++   E+    +     +L + +R    +         EL +
Sbjct: 1697 LAEGTAQQRLVAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATHKRQELEAELAK 1756

Query: 233  NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               E + +L       +E+        + +  +     R  A+E ++L  L +  +++  
Sbjct: 1757 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-ASRFRELAEEAARLRALAEETKRQRQ 1815

Query: 293  LSPIA 297
            L+   
Sbjct: 1816 LAEED 1820


>gi|15800546|ref|NP_286558.1| hypothetical protein Z1015 [Escherichia coli O157:H7 EDL933]
 gi|12513787|gb|AAG55166.1|AE005260_5 putative membrane protein [Escherichia coli O157:H7 str. EDL933]
          Length = 332

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 127 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 185

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 186 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 243

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 244 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 300

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 301 VYRLRIVVTDADDA-----LRQGMPVTV 323


>gi|260760187|ref|ZP_05872535.1| secretion protein HlyD family protein [Brucella abortus bv. 4 str.
           292]
 gi|260670505|gb|EEX57445.1| secretion protein HlyD family protein [Brucella abortus bv. 4 str.
           292]
          Length = 353

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 81  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 140

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++        +    + +       +       D+A    A   +++   +   + 
Sbjct: 141 NTIRVDALLPRGVTT----QSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 196

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 197 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVPAVK-- 253

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 254 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 310

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 311 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 350


>gi|23500168|ref|NP_699608.1| exopolysaccharide biosynthesis protein Bme11 [Brucella suis 1330]
 gi|161620487|ref|YP_001594373.1| polysaccharide export protein [Brucella canis ATCC 23365]
 gi|163844587|ref|YP_001622242.1| hypothetical protein BSUIS_B0420 [Brucella suis ATCC 23445]
 gi|254702811|ref|ZP_05164639.1| hypothetical protein Bsuib36_02489 [Brucella suis bv. 3 str. 686]
 gi|260568279|ref|ZP_05838748.1| polysaccharide export protein [Brucella suis bv. 4 str. 40]
 gi|261753411|ref|ZP_05997120.1| polysaccharide biosynthesis/export protein [Brucella suis bv. 3
           str. 686]
 gi|23463767|gb|AAN33613.1| exopolysaccharide biosynthesis protein Bme11 [Brucella suis 1330]
 gi|161337298|gb|ABX63602.1| polysaccharide export protein [Brucella canis ATCC 23365]
 gi|163675310|gb|ABY39420.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
 gi|260154944|gb|EEW90025.1| polysaccharide export protein [Brucella suis bv. 4 str. 40]
 gi|261743164|gb|EEY31090.1| polysaccharide biosynthesis/export protein [Brucella suis bv. 3
           str. 686]
          Length = 415

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 77/221 (34%), Gaps = 14/221 (6%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+     +    + ++  +    R   + E    DF     +       +  + 
Sbjct: 151 VTAGMQLI--SAQQEYADLQMQITAQTIRRARFEAELKGTDFTYAVPEQ-----TAANKD 203

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++            +FN   +++    +    +  S       L+    L    +   Q+
Sbjct: 204 MVALTRHMVEGERTLFNVRRNNLAAERRALEAQAASYGDEITTLQQSIKLHDTEIQLLQE 263

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDE 250
           ++   K+L ++   +++ L   ER +  +  +       L      Q  + + I  L + 
Sbjct: 264 NVNSSKSLVDRGLAAKSSLRDMERDLSSTRRDALELASFLARARQNQLAVEQRIANLDET 323

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              E A+ L+EI  ++ + QR    ++  +  + K+  Q +
Sbjct: 324 RRSEAASSLQEIDLNMARMQRRSNSQLEAMAEIAKSSGQIS 364


>gi|227114539|ref|ZP_03828195.1| macrolide-specific efflux protein maca precursor [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 399

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 57/149 (38%), Gaps = 4/149 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  +E +V + G+I  +  V  + +  SG IK   VE G ++ +G  +   +D+   D
Sbjct: 42  AEIADLEQTVLADGKIEAQKQV-SVGAQASGQIKALHVELGDKVKKGQLIAEIDDLTQQD 100

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +   + ++KN++     + + L   +    +  +L K     +           +T + 
Sbjct: 101 TLKNGEAALKNIQAQRAAKLAELRNNELSWQRQQMLMKRGVGAQADYDSAKATLDATRAN 160

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +       +   + +   ++   Y     
Sbjct: 161 IDALDAQIIQAQITVNTAKVNLGYTQIRS 189



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 59/204 (28%), Gaps = 22/204 (10%)

Query: 166 MKLTRMRSIYLNRLDLENKSS---LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            ++  +    L    +E +       +A        + +   + +   +++ D   Q+  
Sbjct: 42  AEIADLEQTVLADGKIEAQKQVSVGAQASGQIKALHVELGDKVKKGQLIAEIDDLTQQDT 101

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD---------LEQNQRTF 273
           +      L+    ++   L  +         +     + +            L+  +   
Sbjct: 102 LKNGEAALKNIQAQRAAKLAELRNNELSWQRQQMLMKRGVGAQADYDSAKATLDATRANI 161

Query: 274 ADEMSKLTILEKTRE-------QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPH 324
               +++   + T            I SP+ GT+V      +       Q    I  V +
Sbjct: 162 DALDAQIIQAQITVNTAKVNLGYTQIRSPMDGTVVAIPV-EAGQTVNAIQTTPTIAKVAN 220

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTA 348
                I+ K++   +  VK G   
Sbjct: 221 LDTMTIKVKISEADVVKVKTGMPV 244


>gi|307130632|ref|YP_003882648.1| putative RND efflux membrane fusion protein [Dickeya dadantii 3937]
 gi|306528161|gb|ADM98091.1| Probable RND efflux membrane fusion protein [Dickeya dadantii 3937]
          Length = 403

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 45/358 (12%), Positives = 94/358 (26%), Gaps = 89/358 (24%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V+ G ++ +G PLL  +                                      
Sbjct: 56  ISQLSVQEGQEVHKGDPLLVLDTT-----------------------------------P 80

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L+  +   + Q L       +  +   +  + S  R+L M     R              
Sbjct: 81  LQIEYRDGQAQFLKARQSLRNLRAWENSNEVMSAQRALVMAEMGERD------------- 127

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                       L   + L+ +  +++++ +   + +    LEL+      +  L  +  
Sbjct: 128 --------AASQLNAAEPLYHQGIIARSERDSLAQQLASRRLELQA----ARQALTSVRA 175

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ-- 304
                N   A                  +   KL  +   + +  + +P  G  V  Q  
Sbjct: 176 SGSAENQTVAEL-------------ELNNAEQKLQQIRDQQARSWLYAPGDGYAVRIQND 222

Query: 305 ------SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
                            +PL  ++        RAK     I+H++ G   T+        
Sbjct: 223 DKDKVTFPRLGQRVGAGEPLF-MLAGVTRFDARAKADEADIEHLRPGMPVTLTSEALP-- 279

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             +     +  + P  +  +        Y+V+  +              G  A V  T
Sbjct: 280 -GQPLAGTLRMVSPQANYTEGQPGAT--YDVVFNLDCCHAGQAVPRF--GMSALVTIT 332


>gi|254457977|ref|ZP_05071404.1| secretion protein HlyD [Campylobacterales bacterium GD 1]
 gi|207085370|gb|EDZ62655.1| secretion protein HlyD [Campylobacterales bacterium GD 1]
          Length = 270

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 67/210 (31%), Gaps = 18/210 (8%)

Query: 212 SQNDL-NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           SQ DL  +Q   +          I+ +K +L+       +           +   L   Q
Sbjct: 73  SQADLALEQANSIVNMYQTRINTINREKKLLKKQGMFNSQDMQNLDITADNVQAGLASAQ 132

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +  SK+  +        I +P +G IV  +     +        M IV       I
Sbjct: 133 VLVKNAASKIKQVATVTGYLEIKAPNSGIIVEKRIR-VGDLVAPGMLGMIIV-DLDHLQI 190

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
             +V    +++V K     +  P  +       K+I+   +P+             +++I
Sbjct: 191 EGEVAESDLKYVNKFQKVKIDIPSISYRDTGYVKSIVPSANPMAHT----------FKII 240

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +      F   + ++  G  A++L      
Sbjct: 241 IN-----FEKKSDKIFPGMYAKILIDIDEK 265



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 77/203 (37%), Gaps = 10/203 (4%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
             +G +    N   + + + G IK    + G ++ +   L   E  E   L     ++++
Sbjct: 22  PVTGTV-VSYNQKMVGARYMGYIKHIYFDIGDRVEREDTLFEMESAEFDILKSQADLALE 80

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKA--FESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
                ++  ++ ++ +N +  +L+K   F S++ Q LD               G++S   
Sbjct: 81  QANSIVNMYQTRINTINREKKLLKKQGMFNSQDMQNLDITA-------DNVQAGLASAQV 133

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            +K   ++++ +      LE K+     ++    +   ++        +   D  Q E  
Sbjct: 134 LVKNAASKIKQVATVTGYLEIKAPNSGIIVEKRIRVGDLVAPGMLGMIIVDLDHLQIEGE 193

Query: 223 VYKSTLELRENIHEQKNMLRHIN 245
           V +S L+      + K  +  I+
Sbjct: 194 VAESDLKYVNKFQKVKIDIPSIS 216


>gi|126668597|ref|ZP_01739550.1| putative secretion protein [Marinobacter sp. ELB17]
 gi|126626927|gb|EAZ97571.1| putative secretion protein [Marinobacter sp. ELB17]
          Length = 286

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 64/214 (29%), Gaps = 32/214 (14%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANY-------------LKEISRDLEQNQRTFADEM 277
           +  I E    L      ++ A  ++  +             L+      E  + ++    
Sbjct: 80  QAKIAEAGAYLAQKRSAWELARHQYQRHEGLSGRQTISGENLETYRIQTESAKASYELAQ 139

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++L       ++  + +P  GT+         NY  Q QP++ +V      Y+       
Sbjct: 140 AQLATARIDLQRTRVTAPETGTVSNLILN-EGNYVNQGQPVVSLV-QKSSFYVTGYFEET 197

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV-------- 389
           ++Q +  G  A V           + +  +  I   I+    +  +Q   +V        
Sbjct: 198 KLQKIHVGQNARVTLMS-----GGEMQGKVTSIAQGIADTSVSSNSQLLPQVQQAVNWVR 252

Query: 390 ---ILKIT-DLAFSDNNIELRNGFPAEVLFTAKN 419
               + +   L     ++ L  G    +      
Sbjct: 253 LAQRIPVDITLDSLPPSLNLSAGMTVSIYLETDQ 286



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 78/229 (34%), Gaps = 7/229 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +TLL +   I    W     +    +  G I  +  V+ I    SG + + +V N   + 
Sbjct: 9   ITLLVVFAAILAGNWIWNHYLHSPWTRDGRIRAD--VITIAPDVSGWVTRLEVSNNQPVN 66

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK---SALDFLNNKYDVLEKAFESREE 136
           +G  L   ++      I      +   R   +  +      + L+ +  +  +  E+   
Sbjct: 67  KGDLLFVIDESRYQAKIAEAGAYLAQKRSAWELARHQYQRHEGLSGRQTISGENLETYRI 126

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q       Y    +++    I      +    T   S  +  L+  N  +  + ++S  Q
Sbjct: 127 QTESAKASYELAQAQLATARIDLQRTRVTAPETGTVSNLI--LNEGNYVNQGQPVVSLVQ 184

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           K    +   FE+  + +  + Q  R+   S  E++  +      +   +
Sbjct: 185 KSSFYVTGYFEETKLQKIHVGQNARVTLMSGGEMQGKVTSIAQGIADTS 233


>gi|332703136|ref|ZP_08423224.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332553285|gb|EGJ50329.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 363

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 59/195 (30%), Gaps = 22/195 (11%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDLEQNQRTFADEMSKLTIL 283
           + ++L       +          D++    + Y +      +L++ +       S L   
Sbjct: 111 AKIDLSALNASLRKAQASYELAKDQSERRKSLYEQAFISREELDKAETELRLAKSGLDEA 170

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQH 341
           +   +Q  + SPI G +          +  +  P+ ++V       I  +  V    ++H
Sbjct: 171 QVAYDQGLVHSPIDGVVNELHVD-PGEFVAEGAPVAEVVNTD---IIDVRLGVPELDVRH 226

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           +  G    V    Y     + ++  I  +    S                  T +  ++ 
Sbjct: 227 LSMGQPVLVTVDAYP---GQAWEGRITFLAYKASSSTRTFS-----------TKVTVANG 272

Query: 402 NIELRNGFPAEVLFT 416
           +  +R G  A     
Sbjct: 273 DGRIRPGMIARASLQ 287



 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/102 (12%), Positives = 31/102 (30%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++    E G ++ +G  +   +       +   + S +  +   +  KS  +     
Sbjct: 90  GGRVEWIGPEEGERVRKGQLIAKIDLSALNASLRKAQASYELAKDQSERRKSLYEQAFIS 149

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            + L+KA                +    + +  I  V   L 
Sbjct: 150 REELDKAETELRLAKSGLDEAQVAYDQGLVHSPIDGVVNELH 191


>gi|306812803|ref|ZP_07446996.1| hypothetical protein ECNC101_12842 [Escherichia coli NC101]
 gi|305853566|gb|EFM54005.1| hypothetical protein ECNC101_12842 [Escherichia coli NC101]
 gi|315299275|gb|EFU58527.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 16-3]
          Length = 331

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLVAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLVAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|300718858|ref|YP_003743661.1| Secretion protein [Erwinia billingiae Eb661]
 gi|299064694|emb|CAX61814.1| Secretion protein [Erwinia billingiae Eb661]
          Length = 359

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 95/296 (32%), Gaps = 25/296 (8%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + Q +    +  +  S  +   ++    ++  +  ++  I   R   +   +  +A + S
Sbjct: 79  DNQQVQQGDRLITLESADYQAALAQAQANVSAQRAQLVDIAATRQLQQATIASAQASVRS 138

Query: 195 HQKDLTMMKNLFEK--NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            Q +    ++  ++    VS   +++Q R    +                       +  
Sbjct: 139 AQAESRRTRDDNQRYSALVSSAAVSRQSREQAAAAW----QQAVAAEQKAQAETTASQRQ 194

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           L   +   + ++   +      D      + +       I +P AGT+  N+      +A
Sbjct: 195 LAVLDARSQQAQAALEQALAQLD------MAKLNVGYTDIRAPFAGTV-GNRRARPGAFA 247

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                L+ +VP     +I A     Q+  +K G  A +R     D     F   +  + P
Sbjct: 248 AAGTQLLSLVPSQG-LWIDANFKESQLAEMKPGQKAEIRADVMPDR---VFHGHVSSLSP 303

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSDNN----IELRNGFPAEVLFTAKNT 420
               Q         T  + +++ ++      D+N      LR G    V    ++ 
Sbjct: 304 ATGAQFSVLPAENATGNFTKIVQRVPVRILLDSNDSRFGALRPGLSVTVNVNQQDR 359



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 38/125 (30%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V +  Q+ QG  L+T E  +    +   + ++   R  +    +         
Sbjct: 70  GYIARVWVLDNQQVQQGDRLITLESADYQAALAQAQANVSAQRAQLVDIAATRQLQQATI 129

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              + +  S + +            + V +  +S   R       +       +   E  
Sbjct: 130 ASAQASVRSAQAESRRTRDDNQRYSALVSSAAVSRQSREQAAAAWQQAVAAEQKAQAETT 189

Query: 185 SSLLR 189
           +S  +
Sbjct: 190 ASQRQ 194


>gi|253580596|ref|ZP_04857860.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847967|gb|EES75933.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 1260

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 64/215 (29%), Gaps = 21/215 (9%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++   +D  K  I++ R  I   +  L+      +      E +E  L +   +     
Sbjct: 399 TQSQQELDNGKAQIQSGREQIAATRQDLNAKKESCNQGLAQIEQQEAGLAEGEAQLEGAR 458

Query: 150 SKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           S++            S       + ++       + +     A L + +  +   ++  E
Sbjct: 459 SQLAALQAQYEQAQASGTYSEEDLAALAAQVSAYQEQVDSQAAQLEASRNQIAAARSELE 518

Query: 208 KNA-----------VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                           + +LNQQE     +  ++     E K   + +     E      
Sbjct: 519 SGLSQVESGLAQLDAKEAELNQQEAAFPDAQAKIDAGWKEVKAQEKKLEPARKEI----- 573

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +E    LE  Q       +KL   +   E+K 
Sbjct: 574 ---QEKEAQLESAQEQIDAAKAKLNSSQAQLEEKE 605


>gi|242237930|ref|YP_002986111.1| hypothetical protein Dd703_0478 [Dickeya dadantii Ech703]
 gi|242129987|gb|ACS84289.1| conserved hypothetical protein [Dickeya dadantii Ech703]
          Length = 436

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 60/172 (34%), Gaps = 6/172 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILL-PIEISVSSSGEILNEDNVVEIK 60
           H F    L     +S +R        I  L+  + LL P+  SV +  E++  +  V   
Sbjct: 150 HAFAHAWLALEPLSSWRRARWRWKFAIPCLLIAACLLIPVRQSVLAPAEVIPFNGRVVAA 209

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
               G+I+ F V+    + +G PL+ F+D       D+ + ++       + E  A    
Sbjct: 210 PLD-GVIQSFAVQPNQSVRKGDPLVRFDDTTLKAQADVAERALNV----AEAEYRASSQR 264

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             +    +   +    Q+     +     + +    I +    + +     R
Sbjct: 265 AFQDADSKARLDFLAAQVAQKRAERDYANALLGRAEIRAERDGIAVFADAER 316


>gi|90579602|ref|ZP_01235411.1| hypothetical protein VAS14_01531 [Vibrio angustum S14]
 gi|90439176|gb|EAS64358.1| hypothetical protein VAS14_01531 [Vibrio angustum S14]
          Length = 378

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 90/250 (36%), Gaps = 20/250 (8%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +K++  + R    +  ++   +++    L+    ++   K   +   V + ++       
Sbjct: 26  IKIQNVKNRQFNQDMQEVGKITAVDSTALTFSASEILQNKYFKDGAYVKKGEVIAA-LDN 84

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            ++  ELR++  + K     +  +      +  +  K+   DLE  Q             
Sbjct: 85  TQAKAELRKSQTQYKIEQSKLQRMLALVKKQPDSISKQ---DLENQQLQTHLAKVDEQQK 141

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           + +     +++P  G +   + +S  +  + S  ++ I+  +    +   ++ +++   K
Sbjct: 142 QDSLSNYELIAPFNGQLTNFK-YSIGSRVRDSDIIVSII-KNDPVEVDYSISQEELADAK 199

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G   T+    Y +   K F   +  I P++ Q              + +     + + +
Sbjct: 200 VGQKVTITVDAYKN---KSFTGDVNYIAPLVDQSSG----------RIDVHAEVENSDKL 246

Query: 404 ELRNGFPAEV 413
            L  G  A+V
Sbjct: 247 -LVPGMFAKV 255



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 11/86 (12%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I++    ++G+ + +G  +   ++ +    +   +   K  +  +   +  L  +  + D
Sbjct: 61  ILQNKYFKDGAYVKKGEVIAALDNTQAKAELRKSQTQYKIEQSKL---QRMLALVKKQPD 117

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSK 151
            + K  +   +QL   L K      +
Sbjct: 118 SISKQ-DLENQQLQTHLAKVDEQQKQ 142


>gi|254712296|ref|ZP_05174107.1| secretion protein HlyD family protein [Brucella ceti M644/93/1]
 gi|254715368|ref|ZP_05177179.1| secretion protein HlyD family protein [Brucella ceti M13/05/1]
          Length = 349

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 77  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 136

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++        +    + +       +       D+A    A   +++   +   + 
Sbjct: 137 NTVRVDALLPRGVTT----QSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 192

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 193 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGAQLVSLVPAVK-- 249

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 250 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 306

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 307 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 346


>gi|209918041|ref|YP_002292125.1| hypothetical protein ECSE_0850 [Escherichia coli SE11]
 gi|218553379|ref|YP_002386292.1| hypothetical protein ECIAI1_0831 [Escherichia coli IAI1]
 gi|218694269|ref|YP_002401936.1| hypothetical protein EC55989_0839 [Escherichia coli 55989]
 gi|260843038|ref|YP_003220816.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli O103:H2 str. 12009]
 gi|260854086|ref|YP_003227977.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli O26:H11 str. 11368]
 gi|260866962|ref|YP_003233364.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli O111:H- str. 11128]
 gi|293433056|ref|ZP_06661484.1| hypothetical protein ECCG_01180 [Escherichia coli B088]
 gi|332282361|ref|ZP_08394774.1| transporter auxiliary protein [Shigella sp. D9]
 gi|226710502|sp|B7M768|YBHG_ECO8A RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710505|sp|B6I7V1|YBHG_ECOSE RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|254807373|sp|B7LC78|YBHG_ECO55 RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|209911300|dbj|BAG76374.1| putative membrane protein [Escherichia coli SE11]
 gi|218351001|emb|CAU96705.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor; UPF0194 family [Escherichia coli 55989]
 gi|218360147|emb|CAQ97696.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor; UPF0194 family [Escherichia coli IAI1]
 gi|257752735|dbj|BAI24237.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli O26:H11 str. 11368]
 gi|257758185|dbj|BAI29682.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli O103:H2 str. 12009]
 gi|257763318|dbj|BAI34813.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli O111:H- str. 11128]
 gi|291323875|gb|EFE63297.1| hypothetical protein ECCG_01180 [Escherichia coli B088]
 gi|323967397|gb|EGB62818.1| HlyD family protein secretion protein [Escherichia coli M863]
 gi|324114362|gb|EGC08331.1| HlyD family protein secretion protein [Escherichia fergusonii B253]
 gi|324116219|gb|EGC10141.1| HlyD family protein secretion protein [Escherichia coli E1167]
 gi|325498033|gb|EGC95892.1| hypothetical protein ECD227_2130 [Escherichia fergusonii ECD227]
 gi|332104713|gb|EGJ08059.1| transporter auxiliary protein [Shigella sp. D9]
          Length = 332

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 127 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 185

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 186 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 243

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 244 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 300

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 301 VYRLRIVVTDADDA-----LRQGMPVTV 323



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 52  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 105 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 160 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 203

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 204 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 263

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 264 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 320

Query: 348 ATVRF 352
            TV+F
Sbjct: 321 VTVQF 325


>gi|257061291|ref|YP_003139179.1| efflux transporter RND family, MFP subunit [Cyanothece sp. PCC
           8802]
 gi|256591457|gb|ACV02344.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           8802]
          Length = 421

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 71/230 (30%), Gaps = 31/230 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +    +S     L  + + +        +  +     +  L   + D   ++ LFE+ A+
Sbjct: 107 LLQAVLSQAEAELATQASEVIRAQGEVNEALSAVESAKVQLEQAKIDADRLRQLFEQGAI 166

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++ ++                   E  +      +    +     N  K     +   Q 
Sbjct: 167 AKREV-------------------ELADTQYRTAKQVLVSAQSQVNVRK---SAVAVAQG 204

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               + S +   ++     ++ SPI+G ++  +     N  Q      +IV     + ++
Sbjct: 205 RVNAQKSLIKQEQERLSYSSLASPISGYVLQ-RVLEPGNLVQPGS---EIVRLGDFSQVK 260

Query: 332 AKVTPKQIQ--HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
             V   ++   ++K G +  VR   +           ++ I P       
Sbjct: 261 VVVPVTELALANIKVGQSVKVRLDAFPRD---SVGGRVQNISPAADPTAR 307



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/181 (9%), Positives = 67/181 (37%), Gaps = 18/181 (9%)

Query: 37  LLPIEISVSSSG----EILNEDNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTF 87
              ++++++  G     +        ++     S   G +    V+ G ++ +G PL+  
Sbjct: 44  TAAVDVAIARRGSMAEVVEYIGTTQPVQEVSLRSQVQGQLLNLTVDVGDRVTKGQPLVQL 103

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           ++     ++   +  +            A + +  + +V E        ++     K  +
Sbjct: 104 DNSLLQAVLSQAEAELAT---------QASEVIRAQGEVNEALSAVESAKVQLEQAKIDA 154

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              +      +   R +++  T+ R+     +  +++ ++ ++ ++  Q  +   K+L +
Sbjct: 155 DRLRQLFEQGAIAKREVELADTQYRTAKQVLVSAQSQVNVRKSAVAVAQGRVNAQKSLIK 214

Query: 208 K 208
           +
Sbjct: 215 Q 215


>gi|172063598|ref|YP_001811249.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
 gi|171996115|gb|ACB67033.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
          Length = 349

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/369 (11%), Positives = 103/369 (27%), Gaps = 81/369 (21%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P+   R+  L+I+ + G+   +       +  S+ +   + ++V + SP  G I +  
Sbjct: 7   TRPSMKGRVIALAIVAL-GIAALAYAYHRTSAYPSTDDASIDADLVHVASPVGGRIVRLA 65

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V    ++ +G  L   + +            +   +   D E +                
Sbjct: 66  VHENQRVAKGDLLYEIDPVPYR---------LTVAQAQADVELARA-------------- 102

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                                          SL  +   +   + N      +       
Sbjct: 103 -------------------------------SLDTRRRSLIGEHSNAAVAAEQVKRATQN 131

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                +D+  +  L  +  VS    +Q +     + + L +   +Q++  + I       
Sbjct: 132 YDLATRDVNRLAPLAAQGYVSAQQFDQAKVRQRDAAVSLAQAKEQQRSSAQTIG------ 185

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                        D      T     + L   +   +   + +P  G +      +    
Sbjct: 186 -------------DDADAIATLHAREAALARAQHALDDTVVRAPHDGLVTGLTVLA-GET 231

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKI 370
              +Q +  ++  S+   +        +  +  G  ATV    Y+ I R +     +  I
Sbjct: 232 LAPNQSIFTLIDASEWFAV-GNFRETSLNRIAVGDCATV----YSMIDRSRALTGKVVGI 286

Query: 371 DPIISQQDN 379
              I+  D 
Sbjct: 287 GAGIADSDR 295


>gi|73974722|ref|XP_857294.1| PREDICTED: similar to plectin 1 isoform 1 isoform 7 [Canis
            familiaris]
          Length = 4544

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1340 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAEELQRRMQEEVA 1399

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKARQVEAAERSRVRIEEEIR------- 1452

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1453 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1511

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1512 AELALRVKAEAEAAREKQR 1530



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 11/226 (4%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2180 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRNQVEEELFSVRVQ 2233

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2234 MEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQL 2293

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++DL   + L EK    +    Q+   +      L++     +   R + E  ++   +
Sbjct: 2294 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKEQMAQQ 2353

Query: 255  FANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             A   +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2354 LAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2399



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2229 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2288

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2289 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKE 2348

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2349 QMAQQLAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2408

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2409 EIGEKLHRTELATQEKVTLVHTLEIQRQQSD 2439



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 58/204 (28%), Gaps = 7/204 (3%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  +   +  L                + + L +   + E + L  +        ++  
Sbjct: 1315 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1374

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  ++ +      R +       E  +   +    S Q++L  ++   E    ++ 
Sbjct: 1375 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1434

Query: 215  D-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLE 267
              +   ER   +   E+R    + +   R       E         E     ++   + E
Sbjct: 1435 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAE 1494

Query: 268  QNQRTFADEMSKLTILEKTREQKT 291
            + +R   DE  +    E     + 
Sbjct: 1495 RLRRQVQDESQRKRQAEAELALRV 1518



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/229 (10%), Positives = 72/229 (31%), Gaps = 16/229 (6%)

Query: 75   GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNKYD 125
            G ++ +   L      +  + I   ++ +   +  ++           +S  + +  +Y 
Sbjct: 1259 GEKVDECQQLAK----QYINAIKDYELQLVTYKAQLEPVASPAKKPKVQSGSESVIQEYV 1314

Query: 126  VLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLEN 183
             L   +         ++     T  ++              + +L  + +    +  L  
Sbjct: 1315 DLRTRYSELTTLTSQYIKFIRETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1374

Query: 184  KSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +     
Sbjct: 1375 AHAQAKAQAEREAEELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKA 1434

Query: 243  HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1435 RQVEAAERSRVRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAE 1483



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 65/191 (34%), Gaps = 2/191 (1%)

Query: 89   DIETTDLIDLKKVSIKNL-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +E +   +  K+ +  + R     E+ A  F     ++ EK   +           +  
Sbjct: 2372 QLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELATQEKVTLVHTL 2431

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +  +   +   R+   +L R +        L  + S     +   ++ L   + L E
Sbjct: 2432 EIQRQQSDHDAERLRAAITELEREKEKLQEEATLLQQKSE-EMQVVQQEQLLQETRALQE 2490

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                 ++ L Q+ER + +   +L +   ++    + + E       +     +++   +E
Sbjct: 2491 SFLSEKDRLLQRERFIEQEKAKLEQLFRDEVAKAQKLREEQQRQQQQMEQEREQLVASME 2550

Query: 268  QNQRTFADEMS 278
            + ++   +   
Sbjct: 2551 EARQCQREAEE 2561



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1548 RLRQAEADRARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEA 1607

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  R+++    RL L+ +    +  L+  + +    +  
Sbjct: 1608 ERRAQQQAEAERAREEAEQELERWRLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1667

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ ++     +   A  E   
Sbjct: 1668 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLVAEQELIRLRAETEQGE 1723

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1724 QQRQLLEEELARLQREAAAATHKRQELEAELAK 1756



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1453 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1506

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1507 KRQAEAE--LALRVKAEAEAAREKQRALQALEDVRLQAEEAERRLRQAEADRARQVQVAL 1564

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1565 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEAERRAQQQAEAERARE 1622

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  ++LE+ +    + +      E+  +QK++
Sbjct: 1623 EAEQELERWRLKANEALRLRLQAEEVAQQKSL 1654



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 63/185 (34%), Gaps = 13/185 (7%)

Query: 125  DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + L    ++ E      L +  +   K      +      + +  R R +    L+ + +
Sbjct: 1637 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1696

Query: 185  SSLLRALLSS-HQKDLTMMKNLFEKNAVSQN----DLNQQERIVYKS-------TLELRE 232
             +   A      +++L  ++   E+    +     +L + +R    +         EL +
Sbjct: 1697 LAEGTAQQRLVAEQELIRLRAETEQGEQQRQLLEEELARLQREAAAATHKRQELEAELAK 1756

Query: 233  NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               E + +L       +E+        + +  +     R  A+E ++L  L +  +++  
Sbjct: 1757 VRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-ASRFRELAEEAARLRALAEETKRQRQ 1815

Query: 293  LSPIA 297
            L+   
Sbjct: 1816 LAEED 1820


>gi|16128763|ref|NP_415316.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89107646|ref|AP_001426.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli str. K-12 substr.
           W3110]
 gi|170080454|ref|YP_001729774.1| membrane fusion protein (MFP) component of efflux pump, membrane
           anchor [Escherichia coli str. K-12 substr. DH10B]
 gi|238900054|ref|YP_002925850.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli BW2952]
 gi|20140510|sp|P75777|YBHG_ECOLI RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710503|sp|B1X7C5|YBHG_ECODH RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|259710209|sp|C4ZXW7|YBHG_ECOBW RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|1787013|gb|AAC73882.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli str. K-12 substr.
           MG1655]
 gi|4062353|dbj|BAA35455.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli str. K12 substr.
           W3110]
 gi|169888289|gb|ACB01996.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238862648|gb|ACR64646.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli BW2952]
 gi|315135445|dbj|BAJ42604.1| hypothetical protein ECDH1ME8569_0748 [Escherichia coli DH1]
          Length = 332

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 127 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 185

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 186 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 243

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 244 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 300

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 301 VYRLRIVVTDADDA-----LRQGMPVTV 323



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 52  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 105 YRNEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 160 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 203

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 204 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 263

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 264 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 320

Query: 348 ATVRF 352
            TV+F
Sbjct: 321 VTVQF 325


>gi|332885605|gb|EGK05851.1| hypothetical protein HMPREF9456_02115 [Dysgonomonas mossii DSM
           22836]
          Length = 365

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 73/208 (35%), Gaps = 10/208 (4%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFS-GIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
              ++ ++   G ++ ++ V    S  + G+I +   + GS + +G  L    D      
Sbjct: 60  YGNLDNTIRVKGVLIPDEEVDL--SFETTGMITEIHFKEGSSVKKGQLLAKVNDKPLQAE 117

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   +  I      +  +K+ L     K  V ++A+ES   +L           +++   
Sbjct: 118 LKKLQTQIPLAEDRVYRQKALL----AKDAVSQEAYESVNTELEKLKADIELVKTRIAQT 173

Query: 156 GISSVYRSLKMKLTRMRSIYLN---RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            + + +  +          Y +    +    K + L+   S ++ ++  +K         
Sbjct: 174 ELRAPFDGIIGLRQVSEGTYASPSIIISRLTKITPLKIEFSVNESEVNNVKPGTPLTFTF 233

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNM 240
            NDLN+ +  VY     L       K  
Sbjct: 234 DNDLNKYQATVYAVESNLDRQTLTLKAR 261



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 64/192 (33%), Gaps = 29/192 (15%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI----LEKTREQK 290
            E K +   I    D    + A   K+      +   +   E+ KL      ++    Q 
Sbjct: 116 AELKKLQTQIPLAEDRVYRQKALLAKDAVSQ--EAYESVNTELEKLKADIELVKTRIAQT 173

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            + +P  G I   +  S   YA  S     L KI P      I   V   ++ +VK G  
Sbjct: 174 ELRAPFDGII-GLRQVSEGTYASPSIIISRLTKITP----LKIEFSVNESEVNNVKPGTP 228

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            T  F    D    K++A +  ++  + +Q   L+ +  Y           ++    L+ 
Sbjct: 229 LTFTF----DNDLNKYQATVYAVESNLDRQTLTLKARALY-----------ANPGGRLKP 273

Query: 408 GFPAEVLFTAKN 419
           G    V    + 
Sbjct: 274 GLSTNVEIKLQE 285


>gi|171915709|ref|ZP_02931179.1| putative Secretion protein HlyD precursor [Verrucomicrobium
           spinosum DSM 4136]
          Length = 466

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 78/264 (29%), Gaps = 45/264 (17%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           R+      R++    +R   +    + R      Q +    K L +  ++S  D +  ER
Sbjct: 126 RAKAQAEARLQGADASRDRAKQSLEMARTADKFAQANWERNKGLAKTGSISVTDRDNAER 185

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                  E+R                  E   + A Y      + +Q +       S + 
Sbjct: 186 DADMRAREVRAA----------------EFAQKVAEY------EWQQAKAALLQIESPVG 223

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQ 340
                  +  + +P++G ++  Q  S+         +M+I  P      I A++  +   
Sbjct: 224 TDGVPGAEVELRAPVSGRVLKVQQESA-MVVTPGVAIMEIGDPSD--IEIEAEILSRDAV 280

Query: 341 HVKKG-------------YTATVRF---PHYADIREKKFKAIIEKI-DPIISQQDNNLQT 383
            +K G                 VR      +  +     +     +   ++         
Sbjct: 281 AIKPGADVLIEQWGGDAPLKGRVRLVEPAAFTKVSALGVEEQRVYVLSDLVDPPKEAAAL 340

Query: 384 QEYYEVILKITDLAFSDNNIELRN 407
            + Y V +++    +   ++ L  
Sbjct: 341 GDRYRVEVRV--AVWQQPDVTLIP 362


>gi|297544512|ref|YP_003676814.1| RND family efflux transporter MFP subunit [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296842287|gb|ADH60803.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 393

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 88/254 (34%), Gaps = 32/254 (12%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           + +     DL  +  + +  L   Q  L  +K L EK    Q+  +Q    +  ++L  +
Sbjct: 90  KLLEFETQDLYIQYQIAQKQLEIAQMQLDALKKLKEK----QSRQSQVAAQLPNTSLPQQ 145

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E       I+++      +  +   +    L+Q Q   A+   K       ++QK 
Sbjct: 146 LPSGESTVQQPSISQM------QTTSLSLDDQIKLQQKQVEIAELNLKSIKQSMDKQQKY 199

Query: 292 ILSPIAGTI-----VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           I +   GT+       N  F+SS +   +      V       I   V P    ++K+G 
Sbjct: 200 ITAEFDGTVTVVNAKNNSYFTSSQF--PAIT----VEDLNNLQITLDVNPYDAVNLKEGQ 253

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            A + F        K F+ ++ K+ P  ++           +V +         N+  ++
Sbjct: 254 KAYIHFAD------KTFEGVVSKVSPTATKVITQTGGDNVVKVYVD-----LLSNDGTIK 302

Query: 407 NGFPAEVLFTAKNT 420
            GF  +V       
Sbjct: 303 PGFNVDVDIKIAEK 316



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 6/148 (4%)

Query: 51  LNEDNVVE---IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           + E    +   I SP    + K  V  G ++ +G  LL FE  +      + +  ++  +
Sbjct: 57  VVESKSKQEYYILSPT--KVSKVYVSVGDKVKRGDKLLEFETQDLYIQYQIAQKQLEIAQ 114

Query: 108 CHIDTEKSALDFLNNKYDVLEKA-FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +D  K   +  + +  V  +    S  +QL                    S+   +K+
Sbjct: 115 MQLDALKKLKEKQSRQSQVAAQLPNTSLPQQLPSGESTVQQPSISQMQTTSLSLDDQIKL 174

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +  ++    LN   ++      +  +++
Sbjct: 175 QQKQVEIAELNLKSIKQSMDKQQKYITA 202


>gi|78355596|ref|YP_387045.1| secretion protein HlyD [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218001|gb|ABB37350.1| Secretion protein HlyD [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 407

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 71/271 (26%), Gaps = 46/271 (16%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +       +          + S            +  RA     +     +K LF + AV
Sbjct: 103 LVELDARELVSRRDQAGQALISSRAALGQARQSVAEARAAFDKTRNQYRRIKALFSERAV 162

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q +L+Q E    ++   L             + +                         
Sbjct: 163 AQRELDQAEADYLQAEAALGSARGGLSGAESAVQQAQK---------------------- 200

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                  +L   E      TI +   G IV  +   + + A   +PL+ +V       + 
Sbjct: 201 -------RLEEAEIALGYATITALEDGEIVR-REAEAGDLAFPGKPLL-VVQAGGALRLE 251

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A+V    I  V+ G    V               ++E++ P    +         + V +
Sbjct: 252 AQVREGLIGRVRPGVRLQVNISALG---TDTLDGVVEEVVPSADPRTRT------FLVKV 302

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
            +           L  G    +L      T 
Sbjct: 303 GLPPAP------GLYPGMYGTLLIPLDAQTA 327



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/205 (11%), Positives = 71/205 (34%), Gaps = 6/205 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +  +P+  +  ++G +        +++  +  I +  V  G  + +G  L+  +  E   
Sbjct: 55  AAAVPVTDTAEATGTVRPRTETR-VEAQVTAKILRMAVTTGDVVKKGDVLVELDARELVS 113

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF-LGKYHSTCSKVF 153
             D    ++ + R  +   + ++      +D     +   +    +  + +     ++  
Sbjct: 114 RRDQAGQALISSRAALGQARQSVAEARAAFDKTRNQYRRIKALFSERAVAQRELDQAEAD 173

Query: 154 NYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                +   S +  L+   S +   +  LE     L     +  +D  +++   E   ++
Sbjct: 174 YLQAEAALGSARGGLSGAESAVQQAQKRLEEAEIALGYATITALEDGEIVRREAEAGDLA 233

Query: 213 ---QNDLNQQERIVYKSTLELRENI 234
              +  L  Q     +   ++RE +
Sbjct: 234 FPGKPLLVVQAGGALRLEAQVREGL 258


>gi|258543425|ref|YP_003188858.1| multidrug resistance efflux pump [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634503|dbj|BAI00479.1| multidrug resistance efflux pump [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637561|dbj|BAI03530.1| multidrug resistance efflux pump [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640613|dbj|BAI06575.1| multidrug resistance efflux pump [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643670|dbj|BAI09625.1| multidrug resistance efflux pump [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646725|dbj|BAI12673.1| multidrug resistance efflux pump [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649778|dbj|BAI15719.1| multidrug resistance efflux pump [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652766|dbj|BAI18700.1| multidrug resistance efflux pump [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256655822|dbj|BAI21749.1| multidrug resistance efflux pump [Acetobacter pasteurianus IFO
           3283-12]
          Length = 358

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 102/313 (32%), Gaps = 18/313 (5%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            ++   +  +      R ++++    +      ++ +        +L++      +   +
Sbjct: 40  AYVTADFPTVAPKVSGRIDRVIAQDNQLVHAGEELAHIEDDDYRAALEVAKGNTLAAQGD 99

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKN--LFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
             +LE +     A+++  +  +   +   +F +   ++               +  E   
Sbjct: 100 VANLEAELGRQDAVIAQARAAVLADQAALMFARQNATRYRNLSSGGAGTIEQKQSSEAQE 159

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           ++       ++   +A +     LK     L++ +             E      TI +P
Sbjct: 160 KEAAAAIARDQAGVDAAVRQVAVLK---AQLQRARGVLLRMQGDEKQAELNLSYCTIPAP 216

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +V  +     NY      ++ +VP  +   + A     Q+  V+ G +ATV    +
Sbjct: 217 MDG-VVGERGVRVGNYVHPGTGILAVVPVHEAYVL-ANFQETQLTKVQTGQSATVWVDTF 274

Query: 356 ADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRN---- 407
                   KA ++ + P      +    +  T  + +V+ +I      D +  L      
Sbjct: 275 PGH---PLKAHVDSLAPATGVAFAPIQPDNATGNFTKVVQRIPVKLTFDPDQPLAAKVRV 331

Query: 408 GFPAEVLFTAKNT 420
           G   EV     + 
Sbjct: 332 GMSVEVNIDTASK 344


>gi|254560217|ref|YP_003067312.1| hypothetical protein METDI1742 [Methylobacterium extorquens DM4]
 gi|254267495|emb|CAX23336.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 584

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 50/388 (12%), Positives = 123/388 (31%), Gaps = 25/388 (6%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEI 59
           M      +   +    L R++ + +  ++  LI  S+L P+      S   +    V  +
Sbjct: 1   MSQPTLTSAPEHRHGRLVRVSSVGLASVLAILIGTSVLPPL--VADQSDRAVVNAPVTLL 58

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-SIKNLRCHIDTEKSALD 118
            +P +G I    V  G ++ +G+ +    +        ++    +  LR      ++   
Sbjct: 59  TAPIAGDIGAIPVTAGDKVERGSLVAQITNDRLDRATAIQLAGRVSELRERALAAENKRT 118

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +++A   +  Q++  L               +S      +   ++  +  + 
Sbjct: 119 SNEAYLAAIDRAIRDQSAQMMQVLRSQVEELKAKIASANASGEEKRVLMERQVGMVARDV 178

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
              +   S  +A  ++ Q+       L +K       L    R ++    +   ++ +  
Sbjct: 179 ASPDMVKSTTQAFNAAIQEKKAAEAKLNQK----TVQLEGLARGLF--LGDELRSLADLS 232

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                I        +E     KE+   +   Q     E  +L           I +   G
Sbjct: 233 EKQLSITYDTQRLAIE----EKELKAAMVDQQALLKREDQRL----DRLTTSEIKASAKG 284

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +    + ++  +      L  +V   +   + A  + +Q Q+++ G   T+     +  
Sbjct: 285 VVYNVNA-TTGRHVGAGDSLASVVDCERSFVV-AIFSYRQGQNLQVGSAVTI-----SGG 337

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEY 386
                K I+ +I P  S   +      +
Sbjct: 338 SVGPRKGIVTEILPKTSDTVDATYAVPF 365


>gi|194291397|ref|YP_002007304.1| hypothetical protein RALTA_B0624 [Cupriavidus taiwanensis LMG
           19424]
 gi|193225301|emb|CAQ71243.1| conserved hypothetical protein; putative membrane protein
           [Cupriavidus taiwanensis LMG 19424]
          Length = 469

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 87/297 (29%), Gaps = 22/297 (7%)

Query: 27  GIIGLITWSILLPI--EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           G++  I W++L  +   +   SS   +    V  + SP  G++ K  V  G        L
Sbjct: 50  GVVLFIVWAVLTIMFPNVFTRSSERAVVNSPVSLVTSPVEGVVMKQMVAAGQPFTANQAL 109

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +    ++  ++     V +   +        +          L  A E   ++      +
Sbjct: 110 MV---VQNPNIDRSLLVDLTGKKLDNQQRYDSAKARLESNRRLMAATEQDLQRYNSAAQR 166

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLT---RMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            H+   +     ++S       +     R +S+       E  ++  R  LS        
Sbjct: 167 EHAARVRALEARLASAKAQEDQQQEVVNRNQSMQWAGAVSEAYTNASRYQLSMLSNAKAA 226

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            K   +    +  +       VY S+ +       Q+  +         A LE      +
Sbjct: 227 AKAELDN---AIGESQASRNKVYASSTDGPSATLAQRRQVLGAEAAQLTAELEQLEAYGK 283

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
              ++   ++   D +S L           I SP  GTI                 L
Sbjct: 284 SVDEMIATEQERIDRLSNL----------EIRSPEPGTIEDL-IAQPGMRVAAGATL 329


>gi|189347427|ref|YP_001943956.1| efflux transporter, RND family, MFP subunit [Chlorobium limicola
           DSM 245]
 gi|189341574|gb|ACD90977.1| efflux transporter, RND family, MFP subunit [Chlorobium limicola
           DSM 245]
          Length = 322

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 73/215 (33%), Gaps = 19/215 (8%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            E+  + ++ ++    +  ++ L+++ +I  +   +              A         
Sbjct: 41  VERGYI-RSGVSTTGVVEPRNRLKIQSSIAGRIEDIHVEEGQLVRKGQVLARLSSTERAA 99

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L    +   D+  +L+  +    +  +++PI G I+  +S         S  L  +   S
Sbjct: 100 LLDAAKLQGDK--ELSYWKTVYRETAVIAPINGQII-VRSVEPGQTVTTSDSLFVL---S 153

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               ++A V    I  VK G  A +    Y +I+      ++E I      Q+N      
Sbjct: 154 DRLIVKAYVDETDIGRVKIGQNAVIGLDAYPEIK---VHGVVEHIYYESHLQNN---VNI 207

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           YY   + +      D     R+G  A +       
Sbjct: 208 YY---VDVIPETIPD---VFRSGMSANIDIIVSEK 236



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   VS++G +    N ++I+S  +G I+   VE G  + +G  L      E   L+D  
Sbjct: 46  IRSGVSTTGVVEP-RNRLKIQSSIAGRIEDIHVEEGQLVRKGQVLARLSSTERAALLDAA 104

Query: 100 KVS 102
           K+ 
Sbjct: 105 KLQ 107


>gi|238758347|ref|ZP_04619525.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Yersinia aldovae
           ATCC 35236]
 gi|238703470|gb|EEP96009.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Yersinia aldovae
           ATCC 35236]
          Length = 381

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 82/253 (32%), Gaps = 27/253 (10%)

Query: 204 NLFEKN----AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            L +K      + Q    Q            +    E++        L  +A  +    +
Sbjct: 137 QLVQKGQILFVIDQPRYQQALAESEADVAYYQTLAAEKQRESGRRQRLGIQAMSQ--EEI 194

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            + +  L+  +   A  ++   + +   E+ T+ +P  G I      +   +  +    +
Sbjct: 195 DQSNNVLQTVRHQLAKAIAVRDLAKLDLERTTVRAPAQGWITNLNVHA-GEFINRGATAV 253

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +V      YI A +   +++ VK GY A +        R       ++ I   I+   +
Sbjct: 254 ALV-KKDTFYILAYLEETKLEGVKPGYRAEI--TPLGSNR--ILHGTVDSISAGITNSSS 308

Query: 380 NLQTQEYYEV-----------ILKIT-DLAFSDNNIELRNGFPAEVLFT-AKNTTLAQEI 426
           ++ T+    +            + +   L   D       G  A V+ T A   T  Q  
Sbjct: 309 SIDTKGLATIDNNLEWVRLAQRVPVKIHLDSGDQQHSYPAGTTATVVITRANERTPNQ-- 366

Query: 427 IHPITDNWPKIFE 439
           I PI     ++ E
Sbjct: 367 ISPIVKLMHRLRE 379



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/146 (10%), Positives = 47/146 (32%), Gaps = 6/146 (4%)

Query: 16  SLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            +    L+ ++ +I +   W+           + +     +VV I    SG+I +  V++
Sbjct: 80  RIGITLLVVLLAVIAIFKVWAFYTE----SPWTRDAKFTADVVAIAPDVSGLITEVPVKD 135

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L   +       +   +  +   +  +  EK        +  +   + E  
Sbjct: 136 NQLVQKGQILFVIDQPRYQQALAESEADVAYYQT-LAAEKQRESGRRQRLGIQAMSQEEI 194

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSV 160
           ++         H     +    ++ +
Sbjct: 195 DQSNNVLQTVRHQLAKAIAVRDLAKL 220


>gi|237665587|ref|ZP_04525575.1| secretion protein HlyD family protein [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|237658534|gb|EEP56086.1| secretion protein HlyD family protein [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 329

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 80/240 (33%), Gaps = 33/240 (13%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                 E              K+   +K L E    +Q  L   E+ +  +         
Sbjct: 121 EQITQAEAALDTANKNYDVANKNYERVKQLVEAGGNTQQQLETAEQQLVSAE-------S 173

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           ++KN    +N L +       +  K     +EQ Q       + L   + T    TI +P
Sbjct: 174 QKKNAEEQLNMLKNGPTETSIDVYK---AQVEQAQ-------AALRTAQTTLNNGTISAP 223

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           I+G+I      +    A  +  L+ I  +     + A V    +  + +G    ++    
Sbjct: 224 ISGSITAKNIKA-GEMASPNTALLTIS-NPNALVVNAYVPIDVVGDLCEGQDVVIKVSEA 281

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            D     FK  I  I+  ++ Q+ ++       V + I+D   +     L+ G   EV  
Sbjct: 282 GDTT---FKGKISVINSKLNSQNRSI------LVKIIISDPTSA-----LKPGMFVEVGI 327



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 64/177 (36%), Gaps = 17/177 (9%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+I   + V  + S  S  + +   + GS +  G  L+  +  +    +D  + ++   +
Sbjct: 50  GKIEASEEV-NVASKISARVSEISADIGSNVNAGDVLIKLDTQDLQAQVDQAQAAVNTAQ 108

Query: 108 C------------HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                         I   ++ALD  N  YDV  K +E R +QL++  G   +T  ++   
Sbjct: 109 ASLVNAENSTRPEQITQAEAALDTANKNYDVANKNYE-RVKQLVEAGG---NTQQQLETA 164

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               V    + K    +   L     E    + +A +   Q  L   +       +S
Sbjct: 165 EQQLVSAESQKKNAEEQLNMLKNGPTETSIDVYKAQVEQAQAALRTAQTTLNNGTIS 221


>gi|288573723|ref|ZP_06392080.1| conserved hypothetical protein [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569464|gb|EFC91021.1| conserved hypothetical protein [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 349

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 88/234 (37%), Gaps = 23/234 (9%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +N     L         Q +            +     + +    +  L ++  +     
Sbjct: 73  VNCPRPGLVTELPVLRGQEISSGDLIAKVVEPMLEARKAPLIAERRAILAQVPQL-AQEG 131

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L+   +L   +L   +  L  ++ LFE+ A ++ +LN+    V ++  ++         
Sbjct: 132 SLKKSLALAGKVLDGERDVLRQVQWLFERGAATRAELNEARGKVVRAEGDV--------- 182

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                  +  +A+LE A+     + D+ QN    A   ++L  +E+++ + TILSPI G 
Sbjct: 183 -------IRAQADLEVAS----ATVDIPQNAVRLAQIEAELGAMEESQGELTILSPIPGV 231

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           ++   +        Q  P+  +        + A V P+ +  +     A VRFP
Sbjct: 232 VLDLYA-EEGQTVAQGAPVATLG-DPDSVSVVAFVDPRYLSMIDLESPARVRFP 283



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 35/115 (30%), Gaps = 3/115 (2%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF---EDIETTDL 95
            +    +  G +      + I SP  G++     E G  + QG P+ T    + +     
Sbjct: 204 RLAQIEAELGAMEESQGELTILSPIPGVVLDLYAEEGQTVAQGAPVATLGDPDSVSVVAF 263

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +D + +S+ +L             +    +            L +   +   T  
Sbjct: 264 VDPRYLSMIDLESPARVRFPGGTVMEADPEGRPVIAGPLPSALAEPFSEGKQTVQ 318


>gi|34540477|ref|NP_904956.1| RND family efflux transporter MFP subunit [Porphyromonas gingivalis
           W83]
 gi|34396790|gb|AAQ65855.1| efflux transporter, MFP component, RND family [Porphyromonas
           gingivalis W83]
          Length = 417

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 52/392 (13%), Positives = 115/392 (29%), Gaps = 106/392 (27%)

Query: 24  SIIGIIGLITWSILLP-------------IEIS--------VSSSGEILNEDNVVEIKSP 62
             I I+ L  W++                I+          V  +G++   +++  I + 
Sbjct: 22  GAIVILALAAWAVFGNHSTKFRAERARISIDSVRQGEFNDYVRINGQVQPINSIQ-ISAV 80

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++ +  VE G+ + +G  ++   +                           L+ L++
Sbjct: 81  EGGMVAEKTVEEGAMVHKGDIIVRLTNPMLN-----------------------LNILDS 117

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  + EK    R  Q+                                   +  +RL+L+
Sbjct: 118 EAQLAEKQNFLRNTQVT----------------------------------MEQDRLNLK 143

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +S  LR  +   ++       L+++   S+ +  Q     Y+  +E    + E++    
Sbjct: 144 RESLNLRLDIERKKRKAEQYARLYKEKLCSREEYLQA-GEDYQYAVEGSRLVMERQRQDS 202

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
               +                  + Q + +  +    L ++    E   + +P  G  + 
Sbjct: 203 LYRGI-----------------QVRQMEESLHNMRRNLEMVRARVEDLNVKAPADGQ-LG 244

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR-----FPHYAD 357
                          + +I   S    + A +    I  VK G  A+       F     
Sbjct: 245 LLDVEIGQTVGAGSRIGQINVLSD-YKVEAMIDEHYIDRVKAGLAASFERQGRDFSLRVR 303

Query: 358 IREKKFKAIIEKIDPIISQQ--DNNLQTQEYY 387
               + +    + D I   +  DN    Q YY
Sbjct: 304 KVYPEVRDKQFRTDFIFDGERPDNIRTGQTYY 335


>gi|170078183|ref|YP_001734821.1| RND family efflux transporter MFP subunit [Synechococcus sp. PCC
           7002]
 gi|169885852|gb|ACA99565.1| efflux transporter, RND family, MFP subunit subfamily
           [Synechococcus sp. PCC 7002]
          Length = 420

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 83/264 (31%), Gaps = 29/264 (10%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E   L  L  + D + +A + +E   +       +  S+     +      ++       
Sbjct: 63  EADNLVTLKPEVDGIIQAIQIQEGDTVTAGTPILTLKSERSQASLQQAIAGVEAARAAQA 122

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +       +  +    +A L   ++DL  +K+L +  A+ Q DL+Q +R +  +   L  
Sbjct: 123 NAEAQLSAVNAEKLETQADLKLREQDLQRIKSLVDTGALPQRDLDQSQRDLEVAKARLN- 181

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                                     +K     + Q + T     + + I  +   +  +
Sbjct: 182 ---------------------TINQRIKAAQASVNQAKATLRQSSNTVAIANEDLRETQV 220

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P+AGTI         +Y +Q   +  I   +    +   V  +Q   ++      +  
Sbjct: 221 TAPVAGTIGDLTV-QQGDYLEQGATIATIA-QNTRLSLNFFVPIEQAPDLRLSLPVEL-- 276

Query: 353 PHYADIREKKFK-AIIEKIDPIIS 375
                   +      +  I P + 
Sbjct: 277 --IDYRTLETVGRGQVSFISPEVD 298



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 68/187 (36%), Gaps = 17/187 (9%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GII+  Q++ G  +  GTP+LT +   +   +      ++  R      ++ L  +N + 
Sbjct: 76  GIIQAIQIQEGDTVTAGTPILTLKSERSQASLQQAIAGVEAARAAQANAEAQLSAVNAEK 135

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   + RE+ L     K       +    +    R L++   R+ +I       +  
Sbjct: 136 LETQADLKLREQDLQ--RIKSLVDTGALPQRDLDQSQRDLEVAKARLNTINQRIKAAQAS 193

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE--RIVYKSTLEL---RENIHEQKN 239
            +  +A L      +          A++  DL + +    V  +  +L   + +  EQ  
Sbjct: 194 VNQAKATLRQSSNTV----------AIANEDLRETQVTAPVAGTIGDLTVQQGDYLEQGA 243

Query: 240 MLRHINE 246
            +  I +
Sbjct: 244 TIATIAQ 250


>gi|254732386|ref|ZP_05190964.1| secretion protein HlyD family protein [Brucella abortus bv. 4 str.
           292]
          Length = 349

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 77  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 136

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++        +    + +       +       D+A    A   +++   +   + 
Sbjct: 137 NTIRVDALLPRGVTT----QSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 192

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 193 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVPAVK-- 249

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 250 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 306

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 307 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 346


>gi|124514197|gb|EAY55712.1| probable secretion protein (HlyD) [Leptospirillum rubarum]
          Length = 329

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 73/223 (32%), Gaps = 17/223 (7%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L +K+     DL ++E+         ++ + E    L+ + ++             ++ 
Sbjct: 110 QLLKKDLSRLKDLFRREKDEKDRYFRSKDLLQEHFISLQKLEDVRTRWE--------KVR 161

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
               + Q   A E   L + E     +T+ +PI G +            +  QP++ ++ 
Sbjct: 162 AKRHELQGAIAAEEEALEVTEVHPRNETVFAPIGGQVAQRLVN-LGETVRPRQPIVSLIN 220

Query: 324 HSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYA-DIREKKFKAIIEKIDPIISQQDNN 380
                  ++ A V   Q+  ++ G    +    +  D         I       SQ    
Sbjct: 221 TQDLSSIWLDAFVRETQVWKIRPGQKVRIHIDSWPKDTFYGHVLEFIPAASQAFSQLPAQ 280

Query: 381 LQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFTAKNTT 421
                + +V+ +I      D   N  +  G  AE+     + T
Sbjct: 281 NAAGTFVKVVQRIPVRIVFDSLRNRTILPGMSAEIWI---DRT 320



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 12/118 (10%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT-----------DLIDL 98
           +  +  +  + S   G +    V  G  + +G  L T +    +               L
Sbjct: 52  VYVQGKITLVSSSIGGRVISLNVNEGDPVRRGDILATVDRTGESYQRAHNTGKNLQAYQL 111

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            K  +  L+     EK   D      D+L++ F S ++ L D   ++    +K     
Sbjct: 112 LKKDLSRLKDLFRREKDEKDRYFRSKDLLQEHFISLQK-LEDVRTRWEKVRAKRHELQ 168


>gi|40849914|gb|AAR95669.1| plectin 4 [Mus musculus]
 gi|40849916|gb|AAR95670.1| plectin 5 [Mus musculus]
 gi|40849924|gb|AAR95674.1| plectin 9 [Mus musculus]
          Length = 4449

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1246 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1305

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1306 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1358

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1359 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1417

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1418 AELALRVKAEAEAAREKQR 1436



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2086 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2139

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2140 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2199

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2200 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2256

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2257 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEED 2305



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1543 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1602

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1603 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1652

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1653 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1711

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1712 LAEEAKRQRQLAEED 1726



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 72/216 (33%), Gaps = 10/216 (4%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF----ESREEQLL 139
            L   +  +   L +                K+  + L  + ++ ++      E +E+   
Sbjct: 2199 LAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQ 2258

Query: 140  DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
              + +       +       +  S + +  ++R + ++R     +    R    + +   
Sbjct: 2259 QLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEEDAQRFRKQAEEIGE 2318

Query: 200  TMMK-NLFEKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN 257
             + +  L  +  V+     + +R       E LRE I E +     + +      L+   
Sbjct: 2319 KLHRTELATQEKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEE 2378

Query: 258  ----YLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                  ++I ++ +  Q++F  E   L   E+  EQ
Sbjct: 2379 MQTVQQEQILQETQALQKSFLSEKDSLLQRERFIEQ 2414



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2135 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2194

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2195 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2254

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2255 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMVEMSRAQARAEEDAQRFRKQAE 2314

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2315 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2345



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1244 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1303

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1304 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1363

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1364 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1423

Query: 291  T 291
             
Sbjct: 1424 V 1424



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1163 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1218

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1219 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1278

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1279 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1338

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1339 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1389



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1454 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1513

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1514 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1573

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1574 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1633

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1634 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1677



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1359 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1412

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1413 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1470

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1471 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1528

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1529 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1560


>gi|239787528|emb|CAX83997.1| Membrane-fusion protein [uncultured bacterium]
          Length = 442

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 53/149 (35%), Gaps = 4/149 (2%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H    + K       KR        + G +  ++ + + +   +    +   N   ++SP
Sbjct: 158 HCRASSFKAGWRRIRKRTAWRLGFAVAGALLLAMPVRLSVLAPAE---VVASNPAVVRSP 214

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G+I++  V+    + +G  L   +       +++ +  +   R  ++ + +   F   
Sbjct: 215 LEGVIERVLVKPNQAVSEGQLLFVLDRTSLEGKLEVARRGLATARAELE-QNTQQAFFEI 273

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           K         SR E+ +  + +     ++
Sbjct: 274 KAKAQLSILTSRAEERVAEVAQLEELLAR 302


>gi|298529258|ref|ZP_07016661.1| efflux transporter, RND family, MFP subunit [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298510694|gb|EFI34597.1| efflux transporter, RND family, MFP subunit [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 375

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 94/302 (31%), Gaps = 47/302 (15%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++A      +  VL    ++R +++L   G    +   +           L+     +  
Sbjct: 55  QAAGTIRPWQEPVLSAQVQARVKEVLVAPGDMVESGDLLIRLEQDEFKSRLEQARLDLEG 114

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
              +   +  +     ALL         MK L  ++  +Q +L+Q     +++     + 
Sbjct: 115 AQASIQRIRREIDEAGALLEETGPQFERMKRLHGQDVATQQELDQAASKYFQARAGHEQA 174

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +                               L++   +      K++ L+   +  +I 
Sbjct: 175 LMA-----------------------------LQEAAYSRDALQEKISELQVVLDYTSIR 205

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P    +V     +  + A   +PL+K+     L  + A V  + I  V  G    +R  
Sbjct: 206 APARAQVVRKMVDA-GDLAAPDKPLLKLQ-TRHLLRLEAHVPERLISRVSLGDVFDIRVD 263

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                  KK      +IDP       +      + V L I      +   +L  G  A +
Sbjct: 264 ALD----KKISGRAAEIDPAADADSRS------FLVKLGI------EAGPDLYPGMFARM 307

Query: 414 LF 415
           L 
Sbjct: 308 LI 309



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 57/164 (34%), Gaps = 14/164 (8%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +K+  V  G  +  G  L+  E  E    ++  ++ ++  +  I   +  +D      +
Sbjct: 75  RVKEVLVAPGDMVESGDLLIRLEQDEFKSRLEQARLDLEGAQASIQRIRREIDEAGALLE 134

Query: 126 VLEKAFESREE---QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                FE  +    Q +    +     SK F           +  L  ++    +R  L+
Sbjct: 135 ETGPQFERMKRLHGQDVATQQELDQAASKYFQAR-----AGHEQALMALQEAAYSRDALQ 189

Query: 183 NKSSLLRALLS----SHQKDLTMMKNLFEKNAVSQND--LNQQE 220
            K S L+ +L            +++ + +   ++  D  L + +
Sbjct: 190 EKISELQVVLDYTSIRAPARAQVVRKMVDAGDLAAPDKPLLKLQ 233


>gi|215481982|ref|YP_002324164.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB307-0294]
 gi|213988827|gb|ACJ59126.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB307-0294]
          Length = 359

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 107/316 (33%), Gaps = 18/316 (5%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +++E++   ++  +  +L        +++L     +      +      +  + +    +
Sbjct: 51  LNSEQTDNSYIKGQTTILSSQINGYVKRVLVKDFDHVKKGQPLLIIDAQTYDQKVVQAQS 110

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            +     N  + +   +  +A ++S Q  +  ++  ++ +       +Q       S  E
Sbjct: 111 MVEQAKNNLANQQQTIAQRQADIASAQAKVDQIQAEYDLSVAESKRYSQLGSSGAASQSE 170

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             +    ++N L  + +     ++     LK         Q    +  ++L   + T+  
Sbjct: 171 QDKAFANERNNLALLKQALANLSV-AKEALKTAQVAKVGLQAEVNNAQAQLDQAKTTKNY 229

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I +P+ G  +   +     Y      L+ ++P        A     Q+++++ G  AT
Sbjct: 230 SVIYAPMDGQ-LGEVNPRVGQYVSVGSQLLFLIPQKTWVI--ANFKETQMKNMRIGQKAT 286

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNN 402
                    +   F   +E+I P    +      +  T  + +V+ +I     +  +  +
Sbjct: 287 FTVDALGHQK---FTGHVEEISPAAGSEFSVIKPDNATGNFTKVVQRIAVRIAIDPNQKD 343

Query: 403 I-ELRNGFPAEVLFTA 417
           +  L  G       T 
Sbjct: 344 LNRLSPGMSV---ITT 356



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 61/162 (37%), Gaps = 19/162 (11%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNL 106
                + S  +G +K+  V++   + +G PLL  +        ++   +++  K ++ N 
Sbjct: 63  GQTTILSSQINGYVKRVLVKDFDHVKKGQPLLIIDAQTYDQKVVQAQSMVEQAKNNLANQ 122

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFE------SREEQLLDFLGKYHSTCSKVFNYG---- 156
           +  I   ++ +     K D ++  ++       R  QL        S   K F       
Sbjct: 123 QQTIAQRQADIASAQAKVDQIQAEYDLSVAESKRYSQLGSSGAASQSEQDKAFANERNNL 182

Query: 157 --ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             +     +L +    +++  + ++ L+ + +  +A L   +
Sbjct: 183 ALLKQALANLSVAKEALKTAQVAKVGLQAEVNNAQAQLDQAK 224


>gi|91791356|ref|YP_552306.1| secretion protein HlyD [Polaromonas sp. JS666]
 gi|91701237|gb|ABE47408.1| secretion protein HlyD [Polaromonas sp. JS666]
          Length = 366

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 73/233 (31%), Gaps = 21/233 (9%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            R+++ ++ S     +   + D      L  +  +  +D+    R    +       + +
Sbjct: 68  QRVEVASRLSGYIRDILVQEGDRVRRGQLLAR--LDASDVEGGIRQGQAAGGAAEAALRD 125

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +  L     L++  ++   N L+++    E  +       + L      R    I+SP+
Sbjct: 126 AQIDLERFQRLFERGSVS-DNELRKVRLKFEAAREARNQARAGLDTALAQRAYAEIISPV 184

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +V     +  + A    PL+ +    +       V   Q+  +  G    V      
Sbjct: 185 DGVVVARHKRT-GDLALPGMPLLTL-ESGRGLLFETFVAEGQVAAIAAGQPVQVNIDGVP 242

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                  K  + ++         +      Y+V + + + A       L  G 
Sbjct: 243 A----PLKGTVSRVVRSGDPVSRS------YQVKIALPETA------GLMPGM 279



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 3/144 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S   P+E +   S   +  D  VE+ S  SG I+   V+ G ++ +G  L   +  +   
Sbjct: 51  SAGAPLEYTAVGS---VVSDQRVEVASRLSGYIRDILVQEGDRVRRGQLLARLDASDVEG 107

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            I   + +       +   +  L+     ++    +     +  L F     +       
Sbjct: 108 GIRQGQAAGGAAEAALRDAQIDLERFQRLFERGSVSDNELRKVRLKFEAAREARNQARAG 167

Query: 155 YGISSVYRSLKMKLTRMRSIYLNR 178
              +   R+    ++ +  + + R
Sbjct: 168 LDTALAQRAYAEIISPVDGVVVAR 191


>gi|326389702|ref|ZP_08211267.1| secretion protein HlyD family protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994184|gb|EGD52611.1| secretion protein HlyD family protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 249

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 62/193 (32%), Gaps = 21/193 (10%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-- 290
            I               +ANLE A    +  ++  +NQ   A                  
Sbjct: 66  KIALLDVSQYEEQAKIAKANLEIAKLKYDQVKNGPKNQADIARLNVDQAQANYDLTNLMI 125

Query: 291 ---TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
              TI SPI GTI      +    A     + +I    K  +I+  +  K +  V     
Sbjct: 126 KKGTITSPIDGTITNIYINA-GEIAMAGGNIAQIS-DLKNLFIKIYIPEKNLHKVSLNQE 183

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNN 402
            +++     D+     K  I  I P       N  T+       Y+V ++I D       
Sbjct: 184 VSIKVDSIKDL----IKGKITYISPNGEFTPKNTVTKSSKEDVVYQVKVQILDHIK---- 235

Query: 403 IELRNGFPAEVLF 415
            +L+ G  A+V+ 
Sbjct: 236 -DLKPGMLADVIV 247



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           ++S  SG+I    V+ G +I +G  +   +  +  +   + K +++  +   D  K+   
Sbjct: 42  VQSEISGLITDLYVKEGDEIRKGDKIALLDVSQYEEQAKIAKANLEIAKLKYDQVKNG-- 99

Query: 119 FLNNKYDVLEKAFESREEQ 137
              N+ D+     +  +  
Sbjct: 100 -PKNQADIARLNVDQAQAN 117


>gi|323172089|gb|EFZ57728.1| hlyD family secretion family protein [Escherichia coli LT-68]
          Length = 326

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 121 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 179

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 180 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 237

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 238 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 294

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 295 VYRLRIVVTDADDA-----LRQGMPVTV 317



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 46  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 98

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 99  YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 153

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 154 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 197

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 198 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 257

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 258 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 314

Query: 348 ATVRF 352
            TV+F
Sbjct: 315 VTVQF 319


>gi|289678142|ref|ZP_06499032.1| secretion protein HlyD [Pseudomonas syringae pv. syringae FF5]
          Length = 388

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 4/188 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V+ G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRLLVKEGQQVKAGDLLATLDDRSIRAALEQARAQL 113

Query: 104 KNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            + +  +D  +  L     L  +  +  + F+ ++  +           + +    +   
Sbjct: 114 AHSKAQLDVAQLDLKRYRQLTQENGISRQTFDQQQALVRQLEATAKGNEASINASQVQLS 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y  ++  +T    I         + S    L S  Q D   ++    +  +        E
Sbjct: 174 YTQIRSPVTGRVGIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAE 233

Query: 221 RIVYKSTL 228
           R       
Sbjct: 234 RNAATVKA 241



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 77/252 (30%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L ++       +   + +       +R  + + +  L H   
Sbjct: 63  SLQSVVIRPQVDGVLTRLLVKEG----QQVKAGDLLATLDDRSIRAALEQARAQLAHSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTQENGISRQTFDQQQALVRQLEATAKGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P     + +   A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAERNAA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TV+              +  +  ID  +S     ++               F +   +L 
Sbjct: 238 TVKAYQGDGAANGLLLGEGTLSLIDNQVSASTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|226312112|ref|YP_002772006.1| efflux system [Brevibacillus brevis NBRC 100599]
 gi|226095060|dbj|BAH43502.1| putative efflux system [Brevibacillus brevis NBRC 100599]
          Length = 395

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 100/286 (34%), Gaps = 37/286 (12%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  ++ + L     +Y           +          L    +  L +  L+ KS+  +
Sbjct: 70  AKIAQGQLLATLDTRYTQKEIAAAQGQVEEASARKIKTLKGATAEALEQKRLQVKSA--Q 127

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L   ++DL   + LF   A+SQN++N  +R V ++ + LR       +    +NEL  
Sbjct: 128 DSLDKAKQDLATSEKLFAGGAISQNEINASKRAVTQAEITLR-------DAQLSLNELQK 180

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A  E          D+     +       +   +K+ +   I +P AGT+V  +     
Sbjct: 181 GAEPE----------DVMVANASIKAAAGGVDRAKKSLDDAKIQAPFAGTVVDVRL-QIG 229

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
             A   Q +++IV  S    +   V+ + I   ++     V+       +    +  I  
Sbjct: 230 EQASPGQEIIRIVDLSD-VKVTLDVSNELIGQFRE--KTKVQAVADDGKKS---EGTIAF 283

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           I P++++          Y V + I +            G  A +  
Sbjct: 284 ISPVVNKDTGK------YRVEITIPNADGYWRG-----GMAATIEV 318



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 66/224 (29%), Gaps = 10/224 (4%)

Query: 51  LNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           + E     + S    G I       G++I QG  L T +   T   I   +  ++     
Sbjct: 44  MVEAKRDAVLSFGTGGTISAISATKGAKIAQGQLLATLDTRYTQKEIAAAQGQVEEASAR 103

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                           + +K  + +  Q      K     S+    G +     +     
Sbjct: 104 KIKTLKGATA----EALEQKRLQVKSAQDSLDKAKQDLATSEKLFAGGAISQNEINASKR 159

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN----DLNQQERIVYK 225
            +    +   D +   + L+         +           V +     D  + +     
Sbjct: 160 AVTQAEITLRDAQLSLNELQKGAEPEDVMVANASIKAAAGGVDRAKKSLDDAKIQAPFAG 219

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFA-NYLKEISRDLEQ 268
           + +++R  I EQ +  + I  + D ++++   +   E+     +
Sbjct: 220 TVVDVRLQIGEQASPGQEIIRIVDLSDVKVTLDVSNELIGQFRE 263


>gi|332759694|gb|EGJ89997.1| hlyD family secretion family protein [Shigella flexneri 4343-70]
 gi|333007119|gb|EGK26611.1| hlyD family secretion family protein [Shigella flexneri K-218]
          Length = 331

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322


>gi|300816440|ref|ZP_07096662.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 107-1]
 gi|300531130|gb|EFK52192.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 107-1]
          Length = 331

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|255264112|ref|ZP_05343454.1| multidrug efflux transporter VexE, putative [Thalassiobium sp.
           R2A62]
 gi|255106447|gb|EET49121.1| multidrug efflux transporter VexE, putative [Thalassiobium sp.
           R2A62]
          Length = 415

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 75/244 (30%), Gaps = 25/244 (10%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQK 238
             E ++   R  L   +    + + L  K   VS  D+  +      +  E   N   Q+
Sbjct: 120 QAEGQALPDRDTLMRAETSGDIAEVLVSKGQDVSAGDVIAR---FDPTNNEADANRVAQE 176

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
             L        E            +  +   +       S++T +E+  +  TI +   G
Sbjct: 177 LALAQ---RELENAESLLQRGVATADRVADARAALVAVQSQVTAVEQAAKSLTITAAFDG 233

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            I          +      + ++V       +  +V  + +  +  G  ATVRF     I
Sbjct: 234 RIETLNVD-EGEFVSAGTEVGRLV-DITPLTVAIQVPQQSLTQLSVGQPATVRF-----I 286

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             ++   ++  +    + +               + ++   + +  +  G  AEV+    
Sbjct: 287 TGEERDGVVTFVGTSAASETRTF-----------LAEIEVENEDSAIPAGISAEVIIPTG 335

Query: 419 NTTL 422
             T 
Sbjct: 336 EVTA 339



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/221 (9%), Positives = 61/221 (27%), Gaps = 35/221 (15%)

Query: 15  ASLKRMTLLSIIGIIGLITW--------------------------SILLPIEISVS--- 45
               R +  + + ++ ++ W                          ++   +  +V+   
Sbjct: 60  KGASRSSWFAAVLVLAIVGWMGSGFIIPSEDTDTVIGREDPKPVAVAVTTSLAETVTQFY 119

Query: 46  -SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            + G+ L + +   +++  SG I +  V  G  +  G  +  F+        +     + 
Sbjct: 120 QAEGQALPDRDT-LMRAETSGDIAEVLVSKGQDVSAGDVIARFDPTNNEADAN----RVA 174

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                   E    + L  +              L+    +  +      +  I++ +   
Sbjct: 175 QELALAQRELENAESLLQRGVATADRVADARAALVAVQSQVTAVEQAAKSLTITAAFDGR 234

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
              L      +++      +   +  L  + Q     +  L
Sbjct: 235 IETLNVDEGEFVSAGTEVGRLVDITPLTVAIQVPQQSLTQL 275


>gi|170741670|ref|YP_001770325.1| hypothetical protein M446_3508 [Methylobacterium sp. 4-46]
 gi|168195944|gb|ACA17891.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
          Length = 411

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/327 (11%), Positives = 105/327 (32%), Gaps = 33/327 (10%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
                   + +P  G++     + G+ + + T L T  +        + + +   L   +
Sbjct: 37  TVNARFTVVAAPIEGVVTATPPKVGTSVPKHTELFTIRNSR------IARTAEAQLDADL 90

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              +  L           +A E++   L       +    +     ++++ + + ++  R
Sbjct: 91  GAARERL-----------RALEAQIGNLTALRNDLNGRLKEYQQASLANIQQEMVVRQQR 139

Query: 171 MRSIYLNRLDLENKSSLLRALLS-------SHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           + +   N+            L +       S +           + A+++ +L +  R +
Sbjct: 140 IGAAQANQASATADLVRKTTLGATGVVAGSSVEAARAASITAASEQAIAKAELERLNRQL 199

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
               ++    + E +N + +  +  DE  ++ A    +   +  + Q     ++      
Sbjct: 200 --DAVKRGTFVGEGRNDVPYSQQRADEVTIQLATVETQTRSERARVQL-LVRQLEIERQR 256

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
             T     +  P  G I  N   + SN       L++++   +  ++   V       ++
Sbjct: 257 NDTLSLADVRVPFEGVIWRNNVVAGSNVV-VGNELIRLL-DCRDLFVDILVDETDYDQIR 314

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKI 370
            G  A VR         +  +  +  +
Sbjct: 315 PGDQAEVRLLG----STEIIRGTVVSV 337


>gi|119468118|ref|ZP_01611244.1| putative cation efflux system protein [Alteromonadales bacterium
           TW-7]
 gi|119448111|gb|EAW29375.1| putative cation efflux system protein [Alteromonadales bacterium
           TW-7]
          Length = 497

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 68/178 (38%), Gaps = 16/178 (8%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L +  E +  A     N L   ++   ++    A+ + +L   ++  +  T  +  +G 
Sbjct: 152 QLVNAQEEFLLAVNRNNNVLIRAAKARLESLNVSAEFIERLQKNKQIMQNITFYARQSGI 211

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +          Y +    +M I       ++ A++  +Q   +  G   T+   ++   +
Sbjct: 212 VDELNVR-EGFYVKPGTSMMSIA-QLDEVWVEAEIFERQSSLISVGLPVTMTLDYF---K 266

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            K ++  ++ I P +  ++  L       V L+     F++ +++L+    A+V    
Sbjct: 267 GKIWQGQVDYIYPALDAKNRTL------RVRLR-----FTNKDLKLKANMFAQVTIHT 313



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 97/275 (35%), Gaps = 22/275 (8%)

Query: 48  GEILNEDNVVEIKSP-FSGIIKKFQVE-NGSQILQGTPLLTF-EDIETTDLIDLKKVSIK 104
           G +    + +    P   G ++   V+  G ++  G PL T           +      +
Sbjct: 107 GYVQYNQDKITHIHPRVEGWLEDLYVKAQGDKVSAGEPLYTLYSPQLVNAQEEFLLAVNR 166

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREE-QLLDFLGKYHSTCSKV-FNYGISSVYR 162
           N    I   K+ L+ LN   + +E+  ++++  Q + F  +      ++    G      
Sbjct: 167 NNNVLIRAAKARLESLNVSAEFIERLQKNKQIMQNITFYARQSGIVDELNVREGFYVKPG 226

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ-------KDLTMMKNLFEKNAVSQND 215
           +  M + ++  +++     E +SSL+   L           K      +       ++N 
Sbjct: 227 TSMMSIAQLDEVWVEAEIFERQSSLISVGLPVTMTLDYFKGKIWQGQVDYIYPALDAKNR 286

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINE---LYDEANLEFANYLKEISRDLEQNQRT 272
             +         L+L+ N+  Q  +  + +E   +  +  +    +   +   L + +  
Sbjct: 287 TLRVRLRFTNKDLKLKANMFAQVTIHTNASEPQLVVPKEAVIRTQHQNRVVIALGEGRFK 346

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +    + + + + ++  ILS   G +V +   +
Sbjct: 347 SVE----VQVGQTSVDETIILS---GVVVNDSVVT 374


>gi|222837069|gb|EEE75448.1| predicted protein [Populus trichocarpa]
 gi|260450058|gb|ACX40480.1| secretion protein HlyD family protein [Escherichia coli DH1]
          Length = 331

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRNEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|17549262|ref|NP_522602.1| cation transporter transmembrane protein [Ralstonia solanacearum
           GMI1000]
 gi|17431514|emb|CAD18192.1| probable cation transporter transmembrane protein [Ralstonia
           solanacearum GMI1000]
          Length = 382

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 26/201 (12%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                   + +  +   +  L  + EL D++ +     L++   D  Q         ++L
Sbjct: 128 AQATSDAAKAQSTLALTRRNLERLREL-DKSEIAAKRDLEQAQNDYAQAVSEADRANNRL 186

Query: 281 TILEKTREQKT-------ILSPIAGTIVYNQSFSSSNYAQ-QSQPLMKIVPHSKLTYIRA 332
             L      +        + SPI G +V   + +   Y    + P+M  V      ++ A
Sbjct: 187 AQLGAKGGTQVTGGHILAVRSPITGRVVDLNA-AIGGYWNDATAPVMT-VADLSRVFVTA 244

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
               K +  V  G +ATV+   YAD       A +  +  ++              V ++
Sbjct: 245 SAQEKDLAQVYAGQSATVKLDAYAD----ALPAKVRFVGEMLDPDTRT--------VKVR 292

Query: 393 ITDLAFSDNNIELRNGFPAEV 413
              + F +    L+ G  A+ 
Sbjct: 293 ---MVFDNREGRLKPGMFAQA 310


>gi|157159083|ref|YP_001461985.1| hypothetical protein EcE24377A_0860 [Escherichia coli E24377A]
 gi|191166140|ref|ZP_03027974.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli B7A]
 gi|193064407|ref|ZP_03045488.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli E22]
 gi|193069323|ref|ZP_03050278.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli E110019]
 gi|194428165|ref|ZP_03060708.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli B171]
 gi|256021135|ref|ZP_05435000.1| hypothetical protein ShiD9_19604 [Shigella sp. D9]
 gi|300922818|ref|ZP_07138904.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 182-1]
 gi|301327986|ref|ZP_07221151.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 78-1]
 gi|307313795|ref|ZP_07593412.1| secretion protein HlyD family protein [Escherichia coli W]
 gi|309797971|ref|ZP_07692350.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 145-7]
 gi|182639186|sp|A7ZJK6|YBHG_ECO24 RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|157081113|gb|ABV20821.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli E24377A]
 gi|190903749|gb|EDV63464.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli B7A]
 gi|192928869|gb|EDV82482.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli E22]
 gi|192957276|gb|EDV87724.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli E110019]
 gi|194413725|gb|EDX30004.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli B171]
 gi|300420850|gb|EFK04161.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 182-1]
 gi|300845551|gb|EFK73311.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 78-1]
 gi|306906435|gb|EFN36949.1| secretion protein HlyD family protein [Escherichia coli W]
 gi|308118459|gb|EFO55721.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 145-7]
 gi|315060031|gb|ADT74358.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli W]
 gi|320198984|gb|EFW73581.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor protein YbhG [Escherichia coli EC4100B]
 gi|323155684|gb|EFZ41855.1| hlyD family secretion family protein [Escherichia coli EPECa14]
 gi|323159725|gb|EFZ45703.1| hlyD family secretion family protein [Escherichia coli E128010]
 gi|323175587|gb|EFZ61182.1| hlyD family secretion family protein [Escherichia coli 1180]
 gi|323185049|gb|EFZ70415.1| hlyD family secretion family protein [Escherichia coli 1357]
 gi|323379410|gb|ADX51678.1| secretion protein HlyD family protein [Escherichia coli KO11]
 gi|324018524|gb|EGB87743.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 117-3]
 gi|327253581|gb|EGE65210.1| hlyD family secretion family protein [Escherichia coli STEC_7v]
          Length = 331

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|288960167|ref|YP_003450507.1| secretion protein [Azospirillum sp. B510]
 gi|288912475|dbj|BAI73963.1| secretion protein [Azospirillum sp. B510]
          Length = 382

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 76/213 (35%), Gaps = 21/213 (9%)

Query: 209 NAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEIS---- 263
             +S+    + +R+   + L  L + I          +  +  A L  A+ L   +    
Sbjct: 104 GRISEIAFKEGQRVTRGTVLVRLDDAIARATLAQAQASIAFSRAELSRADQLVRQNTGPL 163

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           R+ EQ       + + + + +   +++ I +P  G ++  +  S  ++ Q  + ++ +  
Sbjct: 164 RNREQASAKLLADEAAVQLAKAQLDKQVIAAPFDG-VLGLRKVSVGDFVQAGRDIVNL-E 221

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 +  +V    +  VK G T  V    +       F   +  IDP++      L  
Sbjct: 222 DIDTLKLDFRVPEMFLPAVKVGQTVKVAVDAFGGR---GFDGTVYAIDPLVDVNGRALA- 277

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                +  ++      + +  LR G  A V  T
Sbjct: 278 -----IRARVP-----NPDGSLRPGLFARVSLT 300



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 50/144 (34%), Gaps = 1/144 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V++ G +L  +  V I+   +G I +   + G ++ +GT L+  +D      +   
Sbjct: 80  VERTVTAVGSLL-SNESVVIRPEIAGRISEIAFKEGQRVTRGTVLVRLDDAIARATLAQA 138

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + SI   R  +      +          E+A                    +V       
Sbjct: 139 QASIAFSRAELSRADQLVRQNTGPLRNREQASAKLLADEAAVQLAKAQLDKQVIAAPFDG 198

Query: 160 VYRSLKMKLTRMRSIYLNRLDLEN 183
           V    K+ +        + ++LE+
Sbjct: 199 VLGLRKVSVGDFVQAGRDIVNLED 222


>gi|238018212|ref|ZP_04598638.1| hypothetical protein VEIDISOL_00036 [Veillonella dispar ATCC 17748]
 gi|237864683|gb|EEP65973.1| hypothetical protein VEIDISOL_00036 [Veillonella dispar ATCC 17748]
          Length = 354

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/215 (10%), Positives = 64/215 (29%), Gaps = 18/215 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--EISRDL 266
             ++Q + +     V  +   ++      +    +     +    +  + L+  +    L
Sbjct: 86  QVIAQINGSDTSAQVQNAEGAVKAAQSAYELAETNAKRYRELYAQQAISKLQLDQAENQL 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                      + L +         + +P  G I      +        Q +  +     
Sbjct: 146 NVTSAQLQQAQASLDLSSNQNSYTNLTAPDTGIITAFNIET-GQVVAAGQNVGTLAAGRD 204

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A +  +++  V  G  AT+ F    D+     + ++ +I P+             
Sbjct: 205 PEAVIA-LPEQELTKVHVGSPATITFWALPDVT---VQGVVREISPVPDPVART------ 254

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           Y V + + +       ++L  G       +  ++T
Sbjct: 255 YTVKITLQNP---PKEVQL--GMTINANLSTTDST 284



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 3/106 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFL 120
            G +    V  G  +  G  +      +T+  +   + ++K  +      +T       L
Sbjct: 68  GGRVINKFVNVGDVVQAGQVIAQINGSDTSAQVQNAEGAVKAAQSAYELAETNAKRYREL 127

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +  + +   +  E QL     +     + +      + Y +L  
Sbjct: 128 YAQQAISKLQLDQAENQLNVTSAQLQQAQASLDLSSNQNSYTNLTA 173


>gi|229026020|ref|ZP_04182404.1| multidrug resistance protein A [Bacillus cereus AH1272]
 gi|228735301|gb|EEL85912.1| multidrug resistance protein A [Bacillus cereus AH1272]
          Length = 211

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 51  KLTDWKAEVGKNYNEN-----DKLGAVTVAGANGEQTVDVTIPQNATVVQSNA-TTNAFV 104

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    I  V+KG T  V    Y D         +E++  
Sbjct: 105 GAGSPIAYAF-DMSNLWVTANIEETTIDDVQKGQTVDVYVDAYPDTT---LTGKVEQVGL 160

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 161 TTANTFSMLPSSNATANYTKVKQVVPVKISLDHSKSVNIVPGMNVSVRIH 210


>gi|281356293|ref|ZP_06242785.1| secretion protein HlyD family protein [Victivallis vadensis ATCC
           BAA-548]
 gi|281316985|gb|EFB01007.1| secretion protein HlyD family protein [Victivallis vadensis ATCC
           BAA-548]
          Length = 331

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 80/288 (27%), Gaps = 37/288 (12%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E +       + +  ++    ++     L  +    R   + R           A L + 
Sbjct: 70  EVIARLDSAPYRSELELARAKLAEAEAELTKRRNGNRPEEIARA--RAAVKGFTAALRNA 127

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANL 253
                  + L +  AV+  + ++      ++  EL     + + + R   I E+      
Sbjct: 128 NAQHKRNEELVKTQAVADKEYDETLARRDQTAAELEFAQAQLQLLERGYRIEEIRAAEAQ 187

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A      +R+L                     +  T+ +P AG +V  +         
Sbjct: 188 LAAAQAAVSAREL-------------------DLKDCTLTAPEAG-VVQTRIKEPGAIVA 227

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               ++         +IRA V    +  ++ G    +                I  I P+
Sbjct: 228 AGTGVITET-LDTPVWIRAYVPEPLLGRIRPGMEVEIYIDS--QPDRPAGTGRIGFISPV 284

Query: 374 I-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 S +   L+T   Y + +        +    L  G P  V   
Sbjct: 285 AEFTPKSVETATLRTDLVYRIRIV-----AENGAGNLLQGMPVTVKIV 327



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/145 (9%), Positives = 38/145 (26%), Gaps = 4/145 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            +   V +    SG I +  V+ G +I  G  +   +       ++L +  +      + 
Sbjct: 40  VDTRQVTLGFRVSGRILEILVDEGDRIKTGEVIARLDSAPYRSELELARAKLAEAEAELT 99

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++     N   ++       +               ++      +   +     L R 
Sbjct: 100 KRRNG----NRPEEIARARAAVKGFTAALRNANAQHKRNEELVKTQAVADKEYDETLARR 155

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQ 196
                     + +  LL       +
Sbjct: 156 DQTAAELEFAQAQLQLLERGYRIEE 180


>gi|92118210|ref|YP_577939.1| secretion protein HlyD [Nitrobacter hamburgensis X14]
 gi|91801104|gb|ABE63479.1| secretion protein HlyD [Nitrobacter hamburgensis X14]
          Length = 403

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 57/178 (32%), Gaps = 16/178 (8%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +  L  E   +           ++Q Q  F    + +   E    QK + +P  G
Sbjct: 143 KAQATVARLALERAQQLKARQVGPQVTVDQAQAAFDQANAGIAKTEAIISQKLVRAPFDG 202

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +      +      ++ +       Y    VT K    +K G T  V    Y   
Sbjct: 203 -VLGVRQVEVGQFLTAGTQIVSLT-DLSTLYANFTVTEKDSGRLKVGQTVRVSVDAYP-- 258

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             K+F   I  I+P IS    N          +++     +  +I L+ G  A V+  
Sbjct: 259 -GKEFDGKITTIEPQISTDTRN----------IRVQATITNPGDI-LKPGMFANVIVV 304



 Score = 36.9 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 56/172 (32%), Gaps = 11/172 (6%)

Query: 42  ISVSSSGEILNEDNVVE----------IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
            +V +  E+L                 + S  +G I       GS +++GTPL+   D  
Sbjct: 75  SAVEAKSEVLPNLQRAVGSLAAVHQVNVTSDVNGRITDILFTAGSHVIKGTPLVQLFDKP 134

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
               +   K      R  ++  +            +++A  + ++              K
Sbjct: 135 DQGDLASFKAQATVARLALERAQQLKARQVGPQVTVDQAQAAFDQANAGIAKTEAIISQK 194

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +       V    ++++ +  +     + L +  S L A  +  +KD   +K
Sbjct: 195 LVRAPFDGVLGVRQVEVGQFLTAGTQIVSLTD-LSTLYANFTVTEKDSGRLK 245


>gi|300947125|ref|ZP_07161339.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 116-1]
 gi|300453203|gb|EFK16823.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 116-1]
          Length = 331

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 91/305 (29%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V  G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVGEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|262371103|ref|ZP_06064425.1| HlyD family secretion protein [Acinetobacter johnsonii SH046]
 gi|262313989|gb|EEY95034.1| HlyD family secretion protein [Acinetobacter johnsonii SH046]
          Length = 444

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 84/261 (32%), Gaps = 16/261 (6%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  +++        +L  E K   L A + S  ++     N F+    +  +L  Q   
Sbjct: 63  SVGAQVSGQVQKMYVQLGDEVKQGQLIAQIDSTTQE-----NSFKTAEANIKNLQAQRLQ 117

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              S  E +     Q+ M         E     A+Y K     ++             + 
Sbjct: 118 QEASLNEAQLAYKRQQQMYAQDATSKAELESAEASY-KTAQAQIKAIDAQIESAKVTKST 176

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQ 340
            +       I++P  GT+V             +Q    IV  +  +   I+A+V+   I 
Sbjct: 177 AQTNIGYTRIVAPTDGTVVAI-VTEEGQTVNANQSAPTIVKIAKLQNMTIKAQVSEADIM 235

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--YYEVILKITDLAF 398
            V+KG             R    + +    D I  +   +  T    YY  +  +     
Sbjct: 236 KVEKGQQVYFTTLGDDSKRYASLRQVEPAPDSITDESTTSTSTSTAIYYNALFDVP---- 291

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
            +++ +LR    A+V     +
Sbjct: 292 -NHDGKLRIDMTAQVYIVLDS 311



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 68/191 (35%), Gaps = 26/191 (13%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLP----------------IEISVSSSGEILNEDNVVE 58
            ++K +  +  + ++  + W+   P                +E +V ++G +     +V 
Sbjct: 5   KAVKMVIAVLCVTVLAYVAWTYFKPKQEQPQYISESVTRGDLENTVLATGTLDA-TKLVS 63

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SG ++K  V+ G ++ QG  +   +     +     + +IKNL+     ++++L+
Sbjct: 64  VGAQVSGQVQKMYVQLGDEVKQGQLIAQIDSTTQENSFKTAEANIKNLQAQRLQQEASLN 123

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                    E     + +Q +           +       +    +K    ++ S  + +
Sbjct: 124 ---------EAQLAYKRQQQMYAQDATSKAELESAEASYKTAQAQIKAIDAQIESAKVTK 174

Query: 179 LDLENKSSLLR 189
              +      R
Sbjct: 175 STAQTNIGYTR 185


>gi|332305069|ref|YP_004432920.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172398|gb|AEE21652.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 370

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 86/274 (31%), Gaps = 24/274 (8%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN----LFE 207
                 +   +  K +   + S+   R++ ++ +  +     +       +++    L E
Sbjct: 34  AEQTDNAQARKEAKHRAPSLVSVRAERVNAQSVAREINLYGRTEPNREVTLRSEVNGLVE 93

Query: 208 KNAVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           K  V +    +Q E +V   T +L   +   K+ L    ++  E          +   +L
Sbjct: 94  KIYVQEGQSIKQGEPLVDIETSDLLNRLKSAKSTLSQ-RKIELEGAKSLGQKGYQSKVNL 152

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            Q Q       S+++ LE    + T+ +P  G +   +     +  +    +  +V    
Sbjct: 153 AQAQANLETAASEVSTLELALSKSTLRAPFDGIVNE-RFVELGDLLKDGDEVAMLV-DLN 210

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              I A VT   ++ +  G  A+ R               I  I  +     N       
Sbjct: 211 PLIISADVTESDVRALTLGQQASARMVSGD-----TVTGTIRYISSVSDMGTNTFNV--- 262

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                   ++A  +       G   E+    K T
Sbjct: 263 --------EVALENPQNVFLAGMSTELSIPLKTT 288



 Score = 43.5 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 1/121 (0%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G       V  ++S  +G+++K  V+ G  I QG PL+  E  +  + +   K ++   +
Sbjct: 74  GRTEPNREV-TLRSEVNGLVEKIYVQEGQSIKQGEPLVDIETSDLLNRLKSAKSTLSQRK 132

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++  KS           L +A  + E    +      +            +     ++
Sbjct: 133 IELEGAKSLGQKGYQSKVNLAQAQANLETAASEVSTLELALSKSTLRAPFDGIVNERFVE 192

Query: 168 L 168
           L
Sbjct: 193 L 193


>gi|330504079|ref|YP_004380948.1| RND family efflux transporter MFP subunit [Pseudomonas mendocina
           NK-01]
 gi|328918365|gb|AEB59196.1| RND family efflux transporter MFP subunit [Pseudomonas mendocina
           NK-01]
          Length = 362

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 78/249 (31%), Gaps = 28/249 (11%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            R   +       +   LRA +S   ++L   K          N +   + ++  S  + 
Sbjct: 63  QRQHVVQGQIEAWRRVELRAQVSGSVQNLDQDKG---------NRVAADQLLLSLSPDDR 113

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +   +  +R   +    A           + +L + +   A   ++L          
Sbjct: 114 PAQVARSEADVRQ-RQSDVTAAKRLRERSLVSANELMRLESELAKARAELDSARLQLRNT 172

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P AG I   +     ++ Q  Q L+ +V       + A++  +Q+  ++ G    V
Sbjct: 173 KVKAPFAG-IYDQRMVELGDFVQPGQSLLTLV-DIDRLKVSAQIAQQQVTQLELGQPVKV 230

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
                  +  +  +  +  I         +      + + +K+     + + + L  G  
Sbjct: 231 EL-----LDGRTLQGELHFIAAAADPGSRS------FRIEVKVD----NPDGLRL-AGAS 274

Query: 411 AEVLFTAKN 419
           A +      
Sbjct: 275 ATLHIQTGE 283


>gi|302381954|ref|YP_003817777.1| efflux transporter RND family, MFP subunit [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302192582|gb|ADL00154.1| efflux transporter, RND family, MFP subunit [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 381

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 67/203 (33%), Gaps = 20/203 (9%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L  Q R    +    + N+   +  L    EL +   L  A+    ++          A 
Sbjct: 109 LRAQLRQQQAAVQTAQANLARDEAALSRAQELKERGFLSQASLDTALANQ-RAASANLAS 167

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             + L+  +    Q TI +P++G I  ++S +          L ++V       + A+V 
Sbjct: 168 AQASLSETQTRVNQATIRAPVSGLI-SSRSVTRGQIVAAGTELFRLV-RDGRLELNAEVP 225

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
             ++  V+ G +AT+        +  +    +  + P +  +             + +T 
Sbjct: 226 EAELALVRAGMSATII-----SDQAGQASGTVRIVTPQVDPETRLG------IARVALT- 273

Query: 396 LAFSDNNIELRNGFPAEVLFTAK 418
                    L+ G  A     A 
Sbjct: 274 -----GGTALQPGMFARTEINAG 291



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 21/198 (10%), Positives = 70/198 (35%), Gaps = 6/198 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGII-KKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +  ++++SG +   + V  + +   G++     V+ G  + QG  L+   D      +  
Sbjct: 57  LPRTINASGTVAAWEEV-PVGAETGGLVATAVYVDEGQYVRQGQALVQLNDSLLRAQLRQ 115

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           ++ +++  + ++  +++AL    ++   L++     +  L   L    +  + + +   S
Sbjct: 116 QQAAVQTAQANLARDEAAL----SRAQELKERGFLSQASLDTALANQRAASANLASAQAS 171

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                 ++    +R+     +   + +        +    L     L     V + +L  
Sbjct: 172 LSETQTRVNQATIRAPVSGLISSRSVTRGQIVAAGTELFRLVRDGRLELNAEVPEAELAL 231

Query: 219 QERIVYKSTLELRENIHE 236
               +  + +  +     
Sbjct: 232 VRAGMSATIISDQAGQAS 249


>gi|262165757|ref|ZP_06033494.1| membrane-fusion protein [Vibrio mimicus VM223]
 gi|262025473|gb|EEY44141.1| membrane-fusion protein [Vibrio mimicus VM223]
          Length = 377

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 73/191 (38%), Gaps = 12/191 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +   
Sbjct: 43  VEKQAIAVGQIMPS-HAVAIKSQINGIVGEIYVREGQLVEQGQPLIKVRPNPTPQALTDA 101

Query: 100 KVSIKNLRCHIDTEKSALDFL----------NNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              +     +++++   L  L           N  D +    E + ++      + +   
Sbjct: 102 STELMQSEANLESDLQRLANLEHLVKQKIIPENYDDYVRAKAEVKAKKAEVQQKRQNLEL 161

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +     I     S  +      +I   ++++ E   S   + +++    L  MKN+  K
Sbjct: 162 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQVATEMMQLADMKNIVFK 221

Query: 209 NAVSQNDLNQQ 219
            +VS++D  Q 
Sbjct: 222 GSVSEHDAAQL 232



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 100/262 (38%), Gaps = 34/262 (12%)

Query: 183 NKSSLLRALLSSHQKDLTMMK-NLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           + +  +++ ++    ++ + +  L E+   + +   N   + +  ++ EL ++    ++ 
Sbjct: 56  SHAVAIKSQINGIVGEIYVREGQLVEQGQPLIKVRPNPTPQALTDASTELMQSEANLESD 115

Query: 241 LRHINELYDEANLEF--ANYLKEISRDL---------EQNQRTFADEMSKLTILEKTREQ 289
           L+ +  L      +    NY   +             +Q ++      S    + + +  
Sbjct: 116 LQRLANLEHLVKQKIIPENYDDYVRAKAEVKAKKAEVQQKRQNLELIRSGEASIGQAKLS 175

Query: 290 KTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            T+ +PI+GTI+  +              Q +  +M++    K    +  V+      + 
Sbjct: 176 STLYAPISGTILNIKV-EVGEPIISTESSQVATEMMQLA-DMKNIVFKGSVSEHDAAQLI 233

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL---QTQEY---YEVILKITDLA 397
            G  A +    Y    E+  +  + K+  I S++ NN    + + +   +EV +    + 
Sbjct: 234 SGMPAIITVAPYP---EQAIEGQLTKV-AIQSERLNNPENKEGKSFDNGFEVEIGQLQI- 288

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
              ++I LR+GF A    T + 
Sbjct: 289 --PDSITLRSGFSASAQITLQR 308


>gi|291295881|ref|YP_003507279.1| efflux transporter, RND family, MFP subunit [Meiothermus ruber DSM
           1279]
 gi|290470840|gb|ADD28259.1| efflux transporter, RND family, MFP subunit [Meiothermus ruber DSM
           1279]
          Length = 407

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 64/218 (29%), Gaps = 20/218 (9%)

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           S+  Q    L    +           ++ ++        RS   +   L+      +A L
Sbjct: 91  SQVAQGQVVLRLDPANAQIALRNAELALQQAQVNLERAQRSTAGSLAPLQASLESAQANL 150

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              ++     + LF+  A++Q +L   E                           +D A 
Sbjct: 151 QVAERRYREGQQLFQAGAIAQVELTGLEAAYN------------------QAKAAFDNAR 192

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              A   +  S DL   +       ++L+   +      + +P AG +          + 
Sbjct: 193 ENLARAQRASSEDLALLRLQVQQAQNQLSQARRAVADTEVKAPFAGVVAEIFVN-PGEFV 251

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
              Q + ++   +       ++ P++   +  G    +
Sbjct: 252 SVGQRVFRLA-DTSRLEASFRLPPEEAASLPMGRKVEL 288



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 77/189 (40%), Gaps = 13/189 (6%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +V ++G IL+     ++ +  SG + +  V  GSQ+ QG  +L  +       I L+  
Sbjct: 57  STVRTTGAILSPARESQVGATASGKVLEVAVSEGSQVAQGQVVLRLDP--ANAQIALRNA 114

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +   +  ++ E++      +    L+ + ES +  L     +Y           I+ V 
Sbjct: 115 ELALQQAQVNLERAQRSTAGSLAP-LQASLESAQANLQVAERRYREGQQLFQAGAIAQVE 173

Query: 162 RSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                 LT + + Y   +   +N    L     +  +DL +++   ++   +QN L+Q  
Sbjct: 174 ------LTGLEAAYNQAKAAFDNARENLARAQRASSEDLALLRLQVQQ---AQNQLSQAR 224

Query: 221 RIVYKSTLE 229
           R V  + ++
Sbjct: 225 RAVADTEVK 233


>gi|82776132|ref|YP_402479.1| hypothetical protein SDY_0808 [Shigella dysenteriae Sd197]
 gi|293414073|ref|ZP_06656722.1| hypothetical protein ECDG_00623 [Escherichia coli B185]
 gi|123563093|sp|Q32I67|YBHG_SHIDS RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|81240280|gb|ABB60990.1| putative membrane protein [Shigella dysenteriae Sd197]
 gi|291434131|gb|EFF07104.1| hypothetical protein ECDG_00623 [Escherichia coli B185]
          Length = 332

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 127 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 185

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 186 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 243

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 244 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 300

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 301 VYRLRIVVTDADDA-----LRQGMPVTV 323



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 52  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 105 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 160 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 203

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 204 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 263

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 264 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 320

Query: 348 ATVRF 352
            TV+F
Sbjct: 321 VTVQF 325


>gi|15830127|ref|NP_308900.1| hypothetical protein ECs0873 [Escherichia coli O157:H7 str. Sakai]
 gi|30062280|ref|NP_836451.1| hypothetical protein S0786 [Shigella flexneri 2a str. 2457T]
 gi|215485883|ref|YP_002328314.1| hypothetical protein E2348C_0747 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218549638|ref|YP_002383429.1| hypothetical protein EFER_2313 [Escherichia fergusonii ATCC 35469]
 gi|218699167|ref|YP_002406796.1| hypothetical protein ECIAI39_0771 [Escherichia coli IAI39]
 gi|218704173|ref|YP_002411692.1| hypothetical protein ECUMN_0939 [Escherichia coli UMN026]
 gi|254160872|ref|YP_003043980.1| hypothetical protein ECB_00762 [Escherichia coli B str. REL606]
 gi|254791989|ref|YP_003076826.1| hypothetical protein ECSP_0891 [Escherichia coli O157:H7 str.
           TW14359]
 gi|301024518|ref|ZP_07188194.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 196-1]
 gi|331641308|ref|ZP_08342443.1| putative membrane protein [Escherichia coli H736]
 gi|331646012|ref|ZP_08347115.1| putative membrane protein [Escherichia coli M605]
 gi|331651798|ref|ZP_08352817.1| putative membrane protein [Escherichia coli M718]
 gi|331662150|ref|ZP_08363073.1| putative membrane protein [Escherichia coli TA143]
 gi|331667159|ref|ZP_08368024.1| putative membrane protein [Escherichia coli TA271]
 gi|331676530|ref|ZP_08377226.1| putative membrane protein [Escherichia coli H591]
 gi|331682301|ref|ZP_08382920.1| putative membrane protein [Escherichia coli H299]
 gi|20455387|sp|Q8X7Y9|YBHG_ECO57 RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710501|sp|B7NNM5|YBHG_ECO7I RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710504|sp|B7NA95|YBHG_ECOLU RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710507|sp|B7LJW4|YBHG_ESCF3 RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|254807372|sp|B7ULZ2|YBHG_ECO27 RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|13360332|dbj|BAB34296.1| putative membrane protein [Escherichia coli O157:H7 str. Sakai]
 gi|30040525|gb|AAP16257.1| putative membrane protein [Shigella flexneri 2a str. 2457T]
 gi|209775928|gb|ACI86276.1| putative membrane protein [Escherichia coli]
 gi|209775930|gb|ACI86277.1| putative membrane protein [Escherichia coli]
 gi|209775932|gb|ACI86278.1| putative membrane protein [Escherichia coli]
 gi|209775934|gb|ACI86279.1| putative membrane protein [Escherichia coli]
 gi|209775936|gb|ACI86280.1| putative membrane protein [Escherichia coli]
 gi|215263955|emb|CAS08295.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli O127:H6 str. E2348/69]
 gi|218357179|emb|CAQ89814.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor; UPF0194 family [Escherichia fergusonii
           ATCC 35469]
 gi|218369153|emb|CAR16908.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor; UPF0194 family [Escherichia coli IAI39]
 gi|218431270|emb|CAR12148.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor; UPF0194 family [Escherichia coli
           UMN026]
 gi|242376587|emb|CAQ31296.1| predicted membrane fusion protein [Escherichia coli BL21(DE3)]
 gi|253972773|gb|ACT38444.1| hypothetical protein ECB_00762 [Escherichia coli B str. REL606]
 gi|253976993|gb|ACT42663.1| hypothetical protein ECD_00762 [Escherichia coli BL21(DE3)]
 gi|254591389|gb|ACT70750.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli O157:H7 str. TW14359]
 gi|281177931|dbj|BAI54261.1| putative membrane protein [Escherichia coli SE15]
 gi|284920647|emb|CBG33710.1| HlyD-family secretion protein [Escherichia coli 042]
 gi|299880371|gb|EFI88582.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 196-1]
 gi|309701073|emb|CBJ00371.1| HlyD-family secretion protein [Escherichia coli ETEC H10407]
 gi|331038106|gb|EGI10326.1| putative membrane protein [Escherichia coli H736]
 gi|331044764|gb|EGI16891.1| putative membrane protein [Escherichia coli M605]
 gi|331050076|gb|EGI22134.1| putative membrane protein [Escherichia coli M718]
 gi|331060572|gb|EGI32536.1| putative membrane protein [Escherichia coli TA143]
 gi|331065515|gb|EGI37408.1| putative membrane protein [Escherichia coli TA271]
 gi|331075219|gb|EGI46517.1| putative membrane protein [Escherichia coli H591]
 gi|331079932|gb|EGI51111.1| putative membrane protein [Escherichia coli H299]
          Length = 332

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 127 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 185

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 186 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 243

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 244 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 300

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 301 VYRLRIVVTDADDA-----LRQGMPVTV 323



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 52  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 105 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 160 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 203

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 204 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 263

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 264 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 320

Query: 348 ATVRF 352
            TV+F
Sbjct: 321 VTVQF 325


>gi|187730241|ref|YP_001881019.1| hypothetical protein SbBS512_E2557 [Shigella boydii CDC 3083-94]
 gi|187427233|gb|ACD06507.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Shigella boydii CDC 3083-94]
 gi|320175216|gb|EFW50325.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor protein YbhG [Shigella dysenteriae CDC
           74-1112]
          Length = 331

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 93/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++  ++  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQVKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|332767957|gb|EGJ98143.1| hlyD secretion family protein [Shigella flexneri 2930-71]
          Length = 326

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 121 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 179

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 180 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 237

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 238 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 294

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 295 VYRLRIVVTDADDA-----LRQGMPVTV 317



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 46  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 98

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 99  YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 153

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 154 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 197

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 198 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 257

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 258 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 314

Query: 348 ATVRF 352
            TV+F
Sbjct: 315 VTVQF 319


>gi|282900234|ref|ZP_06308187.1| Secretion protein HlyD family protein [Cylindrospermopsis
           raciborskii CS-505]
 gi|281194876|gb|EFA69820.1| Secretion protein HlyD family protein [Cylindrospermopsis
           raciborskii CS-505]
          Length = 310

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/234 (11%), Positives = 71/234 (30%), Gaps = 22/234 (9%)

Query: 43  SVSSSGEILNEDNVVEIKSPF---SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +V++ G +     V+++          +++  V+ G  +  G  +   ++ +       +
Sbjct: 59  TVTALGRLEPRGKVIKLSGSTLTQGSTVERLLVKEGDMVKVGQIIAILDN-KPRLQAAYE 117

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +         I+ EK                   ++   +  +    +   ++    +  
Sbjct: 118 EAEAAVKIAQINVEK------------------VQQGAKIGEVNAQKAEIGRIEAQRVGD 159

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                   L                 + L+  L + Q +L   + L++  A+SQ+ L+ +
Sbjct: 160 ESGQQTAVLRLEAQWQGETAIQRATINRLQLQLKNAQVELERYQQLYKDGAISQSLLDSK 219

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
              V   T +LRE     + +     +  +EA              +   +   
Sbjct: 220 TLSVDTITQQLREATANLQRIDNTSRKQIEEAKTALNRIRSTGGEQIISAKAIL 273


>gi|256000745|ref|NP_001157675.1| plectin isoform 1hij [Mus musculus]
 gi|256000747|ref|NP_958789.3| plectin isoform 1hij [Mus musculus]
 gi|256355107|ref|NP_958794.2| plectin isoform 1hij [Mus musculus]
 gi|256367522|ref|NP_958790.2| plectin isoform 1hij [Mus musculus]
          Length = 4386

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1183 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1242

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1243 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1295

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1296 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1354

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1355 AELALRVKAEAEAAREKQR 1373



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2023 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2076

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2077 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2136

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2137 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2193

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2194 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2242



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1480 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1539

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1540 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1589

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1590 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1648

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1649 LAEEAKRQRQLAEED 1663



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2160 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2219

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2220 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2277

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2278 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2337

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2338 EKDSLLQRERFIEQ 2351



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2072 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2131

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2132 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2191

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2192 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2251

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2252 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2282



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/181 (11%), Positives = 50/181 (27%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1181 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEE 1240

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1241 VARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1300

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R       E         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1301 LETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1360

Query: 291  T 291
             
Sbjct: 1361 V 1361



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 72/231 (31%), Gaps = 16/231 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---------TEKSALDFLNNK 123
             +G ++ +          +  + I   ++ +   +  ++           +S  + +  +
Sbjct: 1100 RHGEKVEECQKFAK----QYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQE 1155

Query: 124  YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDL 181
            Y  L   +         ++     T  ++              + +L  + +    +  L
Sbjct: 1156 YVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQL 1215

Query: 182  ENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  +A      ++L   M+    +   +  D  QQ+R + +    LR++   +   
Sbjct: 1216 AEAHAQAKAQAELEAQELQRRMQEEVARREEAAVDAQQQKRSIQEELQHLRQSSEAEIQA 1275

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E  + + +     ++ +   LE  +R       +L  L    E+  
Sbjct: 1276 KAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAE 1326



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1391 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEA 1450

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1451 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1510

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1511 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1570

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1571 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1614



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1296 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1349

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1350 KRQAEAE--LALRVKAEAEAAREKQRALQALDELRLQAEEAERRLRQAEAERARQVQVAL 1407

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1408 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVAQLREEAERRAQQQAEAERARE 1465

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1466 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1497


>gi|150376945|ref|YP_001313541.1| polysaccharide export protein [Sinorhizobium medicae WSM419]
 gi|150031492|gb|ABR63608.1| polysaccharide export protein [Sinorhizobium medicae WSM419]
          Length = 434

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 63/193 (32%), Gaps = 9/193 (4%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +DL  +        +  E S +  ++    +   A    E Q  + +    ST + V  
Sbjct: 171 SVDLALLRSNARIARLQAEVSGVKEVHFPEPIGADASHVTEIQNQERI--IFSTRANVLT 228

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               S+     +    +R        LE K +   A + +  ++L  +++L E+     +
Sbjct: 229 RQSKSLDELRNLLDQEIRV-------LEEKVNGSDASIRAADQELKGVRSLVERGVAVAS 281

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             +  ER +        + I       + I+         + N   E++ +L+  Q    
Sbjct: 282 RQSDLERELAGYHASRLDFITAIMRARQEISGTTRSLEGLYDNRHAEVASELQAEQAALE 341

Query: 275 DEMSKLTILEKTR 287
               K    EK  
Sbjct: 342 QLKLKRVTTEKQL 354


>gi|110804795|ref|YP_688315.1| hypothetical protein SFV_0778 [Shigella flexneri 5 str. 8401]
 gi|157160270|ref|YP_001457588.1| hypothetical protein EcHS_A0849 [Escherichia coli HS]
 gi|168752014|ref|ZP_02777036.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4113]
 gi|168756580|ref|ZP_02781587.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4401]
 gi|168764301|ref|ZP_02789308.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4501]
 gi|168767296|ref|ZP_02792303.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4486]
 gi|168787009|ref|ZP_02812016.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC869]
 gi|168799931|ref|ZP_02824938.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC508]
 gi|170020849|ref|YP_001725803.1| hypothetical protein EcolC_2848 [Escherichia coli ATCC 8739]
 gi|170683048|ref|YP_001742898.1| hypothetical protein EcSMS35_0818 [Escherichia coli SMS-3-5]
 gi|187776380|ref|ZP_02802232.2| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4196]
 gi|188496315|ref|ZP_03003585.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli 53638]
 gi|189010041|ref|ZP_02804346.2| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4076]
 gi|194438404|ref|ZP_03070494.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli 101-1]
 gi|195936835|ref|ZP_03082217.1| hypothetical protein EscherichcoliO157_10285 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208807667|ref|ZP_03250004.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4206]
 gi|208814767|ref|ZP_03255946.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4045]
 gi|208822539|ref|ZP_03262858.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4042]
 gi|209398015|ref|YP_002269464.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4115]
 gi|217325447|ref|ZP_03441531.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. TW14588]
 gi|253774202|ref|YP_003037033.1| hypothetical protein ECBD_2828 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|256023609|ref|ZP_05437474.1| hypothetical protein E4_09558 [Escherichia sp. 4_1_40B]
 gi|261225442|ref|ZP_05939723.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258589|ref|ZP_05951122.1| predicted membrane fusion protein (MFP) component of efflux pump,
           membrane anchor [Escherichia coli O157:H7 str. FRIK966]
 gi|293404095|ref|ZP_06648089.1| hypothetical protein ECGG_02480 [Escherichia coli FVEC1412]
 gi|293409170|ref|ZP_06652746.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298379876|ref|ZP_06989481.1| hypothetical protein ECFG_02676 [Escherichia coli FVEC1302]
 gi|300822921|ref|ZP_07103056.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 119-7]
 gi|300898282|ref|ZP_07116633.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 198-1]
 gi|300929404|ref|ZP_07144873.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 187-1]
 gi|300957742|ref|ZP_07169929.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 175-1]
 gi|301020715|ref|ZP_07184783.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 69-1]
 gi|301646224|ref|ZP_07246120.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 146-1]
 gi|307137419|ref|ZP_07496775.1| hypothetical protein EcolH7_04715 [Escherichia coli H736]
 gi|312970870|ref|ZP_07785049.1| hlyD family secretion family protein [Escherichia coli 1827-70]
 gi|123147144|sp|Q0T6G6|YBHG_SHIF8 RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|166919072|sp|A7ZY51|YBHG_ECOHS RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|189041078|sp|B1IXH3|YBHG_ECOLC RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710500|sp|B5YS86|YBHG_ECO5E RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710506|sp|B1LM86|YBHG_ECOSM RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|110614343|gb|ABF03010.1| putative membrane protein [Shigella flexneri 5 str. 8401]
 gi|157065950|gb|ABV05205.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli HS]
 gi|169755777|gb|ACA78476.1| secretion protein HlyD family protein [Escherichia coli ATCC 8739]
 gi|170520766|gb|ACB18944.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli SMS-3-5]
 gi|187767492|gb|EDU31336.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4196]
 gi|188014041|gb|EDU52163.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4113]
 gi|188491514|gb|EDU66617.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli 53638]
 gi|189002964|gb|EDU71950.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4076]
 gi|189356226|gb|EDU74645.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4401]
 gi|189363422|gb|EDU81841.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4486]
 gi|189365658|gb|EDU84074.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4501]
 gi|189373009|gb|EDU91425.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC869]
 gi|189377730|gb|EDU96146.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC508]
 gi|194422628|gb|EDX38625.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli 101-1]
 gi|208727468|gb|EDZ77069.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4206]
 gi|208731415|gb|EDZ80103.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4045]
 gi|208738024|gb|EDZ85707.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4042]
 gi|209159415|gb|ACI36848.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4115]
 gi|217321668|gb|EEC30092.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. TW14588]
 gi|253325246|gb|ACT29848.1| secretion protein HlyD family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|291428681|gb|EFF01706.1| hypothetical protein ECGG_02480 [Escherichia coli FVEC1412]
 gi|291469638|gb|EFF12122.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298279574|gb|EFI21082.1| hypothetical protein ECFG_02676 [Escherichia coli FVEC1302]
 gi|300315558|gb|EFJ65342.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 175-1]
 gi|300358071|gb|EFJ73941.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 198-1]
 gi|300398526|gb|EFJ82064.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 69-1]
 gi|300462604|gb|EFK26097.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 187-1]
 gi|300524462|gb|EFK45531.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 119-7]
 gi|301075561|gb|EFK90367.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 146-1]
 gi|310336631|gb|EFQ01798.1| hlyD family secretion family protein [Escherichia coli 1827-70]
 gi|313650307|gb|EFS14719.1| hlyD family secretion family protein [Shigella flexneri 2a str.
           2457T]
 gi|315619796|gb|EFV00315.1| hlyD family secretion family protein [Escherichia coli 3431]
 gi|320192730|gb|EFW67371.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor protein YbhG [Escherichia coli O157:H7
           str. EC1212]
 gi|320637657|gb|EFX07449.1| putative efflux pump membrane fusion protein [Escherichia coli
           O157:H7 str. G5101]
 gi|320642783|gb|EFX11984.1| putative efflux pump membrane fusion protein [Escherichia coli
           O157:H- str. 493-89]
 gi|320648239|gb|EFX16894.1| putative efflux pump membrane fusion protein [Escherichia coli
           O157:H- str. H 2687]
 gi|320654076|gb|EFX22144.1| putative efflux pump membrane fusion protein [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320659699|gb|EFX27255.1| putative efflux pump membrane fusion protein [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320664169|gb|EFX31320.1| putative efflux pump membrane fusion protein [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323938150|gb|EGB34410.1| HlyD family protein secretion protein [Escherichia coli E1520]
 gi|323942668|gb|EGB38833.1| HlyD family protein secretion protein [Escherichia coli E482]
 gi|323963042|gb|EGB58613.1| HlyD family protein secretion protein [Escherichia coli H489]
 gi|323971960|gb|EGB67181.1| HlyD family protein secretion protein [Escherichia coli TA007]
 gi|324009620|gb|EGB78839.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 57-2]
 gi|326338319|gb|EGD62148.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor protein YbhG [Escherichia coli O157:H7
           str. 1125]
 gi|326346297|gb|EGD70035.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor protein YbhG [Escherichia coli O157:H7
           str. 1044]
 gi|330910538|gb|EGH39048.1| putative membrane fusion protein (MFP) component of efflux pump
           [Escherichia coli AA86]
 gi|332342127|gb|AEE55461.1| conserved hypothetical protein [Escherichia coli UMNK88]
 gi|332760468|gb|EGJ90757.1| hlyD family secretion family protein [Shigella flexneri 2747-71]
 gi|333009784|gb|EGK29233.1| hlyD family secretion family protein [Shigella flexneri K-272]
 gi|333020449|gb|EGK39712.1| hlyD family secretion family protein [Shigella flexneri K-227]
 gi|333021179|gb|EGK40435.1| hlyD family secretion family protein [Shigella flexneri K-304]
          Length = 331

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|308069392|ref|YP_003870997.1| multidrug resistance efflux pump [Paenibacillus polymyxa E681]
 gi|305858671|gb|ADM70459.1| Multidrug resistance efflux pump [Paenibacillus polymyxa E681]
          Length = 217

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 60/192 (31%), Gaps = 18/192 (9%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                +Q  ++  I+      ++E  + ++      EQ+       M           + 
Sbjct: 38  ARIQADQYKVMPQISGEISHIDVEEGDVVQRNEPIAEQDVSGLDASM---------ISKS 88

Query: 291 TILSPIAGTIVYNQS--FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
            + +PI GT++   S      +       +  +V      Y+   +    I  +K G   
Sbjct: 89  VLRAPINGTVIKIYSKEHEIGS---PGSAVATMV-DMNSLYVSTNIEENDINRIKPGQLV 144

Query: 349 TVRFPHY-ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIEL 405
            +        + + K + + E  + + S       +  + +V   + +        +++L
Sbjct: 145 DITLDAAGDQVIQGKVRKVGEASNAVFSLVPAVNTSGNFNKVTQRVPVEIAVNKPKDLKL 204

Query: 406 RNGFPAEVLFTA 417
             G   EV    
Sbjct: 205 IPGTNVEVKIHT 216


>gi|326801023|ref|YP_004318842.1| efflux transporter RND family, MFP subunit [Sphingobacterium sp.
           21]
 gi|326551787|gb|ADZ80172.1| efflux transporter, RND family, MFP subunit [Sphingobacterium sp.
           21]
          Length = 390

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 86/256 (33%), Gaps = 24/256 (9%)

Query: 174 IYLNRLDLENKSSL-LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           + LN+ +L  + +  + A+L      +T  + L+E   + +      +     +      
Sbjct: 61  VALNQTELRAEVNGYITAILVPDGATVTKGQKLYE---IDRTRYQAAQEQAKANLAIAEA 117

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           N+++    +     L  E +      L     DL   Q       + LT      E+  I
Sbjct: 118 NLNKVNRDVERYKRL-AEQDAIAKQTLDYAMTDLNNAQAQVMSARAALTSASTDLERSVI 176

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH---VKKGYTAT 349
            +P  GTI  +Q  +          L+  +  +    +   V  + I+    ++    A+
Sbjct: 177 RAPFNGTIGISQVRT-GALVSAGTTLINTISSTNPIAVDFAVNERDIKQFVDLQSNSAAS 235

Query: 350 VRFP----HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
           ++        +     +    +  ID  +              + ++ T   F + +  L
Sbjct: 236 LKDSVITLQLSGNNTYEKPGRVTAIDRAVDPSTGT--------ITVRAT---FDNPSNVL 284

Query: 406 RNGFPAEVLFTAKNTT 421
           R G  A VL  A +TT
Sbjct: 285 RAGMNANVLVAANSTT 300



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 78/189 (41%), Gaps = 6/189 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G ++  +   E+++  +G I    V +G+ + +G  L   +        +  K ++   
Sbjct: 57  PGTVVALNQT-ELRAEVNGYITAILVPDGATVTKGQKLYEIDRTRYQAAQEQAKANLAIA 115

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +++     ++    +Y  L +     ++ L   +   ++  ++V +   +    S  +
Sbjct: 116 EANLNKVNRDVE----RYKRLAEQDAIAKQTLDYAMTDLNNAQAQVMSARAALTSASTDL 171

Query: 167 KLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           + + +R+ +   + + + ++  L +  ++    ++    +    AV++ D+ Q   +   
Sbjct: 172 ERSVIRAPFNGTIGISQVRTGALVSAGTTLINTISSTNPIAVDFAVNERDIKQFVDLQSN 231

Query: 226 STLELRENI 234
           S   L++++
Sbjct: 232 SAASLKDSV 240


>gi|306845826|ref|ZP_07478394.1| HlyD family secretion protein [Brucella sp. BO1]
 gi|306273718|gb|EFM55556.1| HlyD family secretion protein [Brucella sp. BO1]
          Length = 314

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 49/396 (12%), Positives = 113/396 (28%), Gaps = 85/396 (21%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M+LL +I  +  +  +            GE +    +   +      ++   V+ G  + 
Sbjct: 1   MSLLCVIPFVSSLFAACGTQSLAVGYVEGEFVQLAPLQVAQ------VRNIAVKRGDHVE 54

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P+ T ED +                  I   ++       +  +       R E++ 
Sbjct: 55  AGKPIATVEDTD----------------ARIAVAQAEAALAQAQAQLANLQVGKRPEEIA 98

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                                    LE      RA     Q+ L
Sbjct: 99  V----------------------------------------LEAAVRSARAQADDAQRTL 118

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++L  +   +Q  L+     +  +   + ++       +  +    +E         
Sbjct: 119 LRTRDLARRGVATQAQLDDAATQLEVAEAAIGQSTANL--AVGKLPARPEEIKA------ 170

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                     +       ++L   +  R Q+TI +P AG I      +  + A  S P++
Sbjct: 171 ---------AENAVKSAEAQLQTAKWQRAQRTIEAPAAGRITDV-VRNPGDIAGPSAPVL 220

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++P      ++  +  ++   V  G         + D      +A +  + P       
Sbjct: 221 TMLP-DGAVKLKVYIPEERFSDVAVGSV----LSVHCDGCAPGLQARVSYVSPDPEFTPP 275

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + + E  + ++ + +    D    L+ G   +V  
Sbjct: 276 VIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 311


>gi|188579550|ref|YP_001922995.1| hypothetical protein Mpop_0275 [Methylobacterium populi BJ001]
 gi|179343048|gb|ACB78460.1| conserved hypothetical protein [Methylobacterium populi BJ001]
          Length = 582

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 51/388 (13%), Positives = 122/388 (31%), Gaps = 25/388 (6%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEI 59
           M      +   +    L R++ + +  ++  LI  S+L P+      S   +    V  +
Sbjct: 1   MSQPTLTSAPEHRHGRLVRVSSVGLASVLAILIGTSVLPPL--VADQSDRAVVNAPVTLL 58

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-SIKNLRCHIDTEKSALD 118
            +P +G I    V  G  + +G+ +    +        ++    +  LR      ++   
Sbjct: 59  TAPIAGDIGAIPVAAGDSVDRGSLVAQITNDRLDRATAIQLAGRVSELRERALAAENKRT 118

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   LE+A   +  Q+   L               +S      +   ++  +  + 
Sbjct: 119 SNEAYLAALERAIRDQSAQMTQVLRAQVEELRAKIASANASGEEKRVLMERQVGMVARDV 178

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
              +   S  +A  ++ Q+       L +K       L+   R ++    +   ++ +  
Sbjct: 179 ASPDMVKSTTQAFNAAIQEKKAAEAKLNQK----TVQLDGLARGLF--LGDELRSLADLS 232

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                I        +E     KE+   +   Q     E  +L           I +   G
Sbjct: 233 QKQLSITYDTQRLAIE----EKELKAAMVDQQALLTRENQRL----DRLTTSEIKASAKG 284

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +    + ++  +      L  +V   +   + A  + +Q Q+++ G   T+     +  
Sbjct: 285 VVYNVNA-TTGRHVGAGDSLASVVDCERSFVV-AIFSYRQGQNLQVGSAVTI-----SGG 337

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEY 386
                + I+ +I P  S   +      +
Sbjct: 338 SVGPRRGIVTEILPKTSDTVDATYAVPF 365


>gi|326385328|ref|ZP_08206973.1| secretion protein HlyD family protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326210134|gb|EGD60906.1| secretion protein HlyD family protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 358

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 50/361 (13%), Positives = 90/361 (24%), Gaps = 82/361 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I K  VE+   +  G  L   ED               + R  +   +  +  +    
Sbjct: 55  GRIDKVLVEDNEMVRPGQVLAHIED--------------DDFRAALTMAQGDVAAMEGNV 100

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L+     ++  +        +  + +                 + R+ Y +       
Sbjct: 101 ARLKADIARQQAVIDAARATVRADEADLVFAR-------------QNRARYSH------- 140

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                               L E  A  Q      E     +      +  E  N    I
Sbjct: 141 --------------------LAEGGASPQELRQGAEAKAATADATRAHDQAEVSNATGQI 180

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             L                  L+Q +                    TI +P+ G +   +
Sbjct: 181 AVLK---------------AQLQQAEGQLDKARGAEQQARLNLSYCTIQAPVFGRV-GAR 224

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 Y Q    L+ +VP      + A     Q+  ++ G  A+V    +     K   
Sbjct: 225 GLRVGAYVQAGTGLLAVVPTQAAYVV-ANFQETQLTRIRPGQQASVWVDTFP---GKVLH 280

Query: 365 AIIEKIDPII----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRN----GFPAEVLFT 416
           A ++ + P      S    +  T  + +VI +I      D    L      G   E    
Sbjct: 281 AHVDSVAPASEVAFSPIKPDNATGNFTKVIQRIPVKLTFDPGQPLAAMVRVGMSVEAKID 340

Query: 417 A 417
            
Sbjct: 341 T 341


>gi|254695260|ref|ZP_05157088.1| Multidrug resistance protein A [Brucella abortus bv. 3 str. Tulya]
          Length = 313

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 59/202 (29%), Gaps = 18/202 (8%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEIS---RDLEQNQRTFADEMSKLTILEKTRE 288
           ENI    N            + + A+    IS       +   +            +   
Sbjct: 113 ENIPVAANQQVKAGARLAGVDAQIASAKANISVLEAQYNEAASSTKSLELARDKAARDLS 172

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             +  +P  G I  N S    +     Q +  +VP     YI A     Q+ H+K G TA
Sbjct: 173 FTSPRAPFDGVI-GNLSGKKGDLVAPGQKIAALVPVD-QLYIDANFKETQLAHIKVGETA 230

Query: 349 TVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSD 400
            +        +   F   +  I P           +      T+    V ++IT    + 
Sbjct: 231 HIYVDAIDGTK---FDGKVASIAPASGAVFSLLPPENATGNFTKVVQRVPVRITIPKEAF 287

Query: 401 NNIELRNGFPAEVLFTAKNTTL 422
            + ++R G    V       T 
Sbjct: 288 ESGKIRAGLSVIVDVDT--RTA 307


>gi|182676801|ref|YP_001830909.1| secretion protein HlyD family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182636648|gb|ACB97420.1| secretion protein HlyD family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 352

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 53/372 (14%), Positives = 107/372 (28%), Gaps = 92/372 (24%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLP--------IEIS-----VSSSGEILNEDNVVEIKS 61
            S   M LL+ +G++  I W    P        I         ++ G +       EI S
Sbjct: 3   TSWLAMVLLTSLGLVA-IVWPAQAPTFAQTQPSISPVSRQHLAAAPGLVEPVSEEREIGS 61

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              GII + +VE   ++ +G  +   E+       D +   + + R  +   ++ L+   
Sbjct: 62  QVIGIIHEVRVEENDEVHEGQIIAVIEN-------DEQVARLSSARAELALRQAELE--- 111

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                                 +  +           +  +  +  L   R  Y  R+ L
Sbjct: 112 ----------------------RSINGARSEERKEARAALKEAEANLQLARVEYQRRVPL 149

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
               +   A L     +L            ++ ++   ER+         E+I   +  +
Sbjct: 150 AKTGASTMAALDVATANLDTT--------AARREVMA-ERLALLEAGTRPEDIAAARAQV 200

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           R                       L +     AD +          ++  I SPIAG ++
Sbjct: 201 R-----------------------LAEANVALADAL---------LDKTLIRSPIAGIVL 228

Query: 302 YNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                +      Q   P+  I        +RA+V    +     G    +    + D + 
Sbjct: 229 RRVRIAGEAVTNQPPTPIALIGNLHG-LRVRAEVDETDVSQATVGQRVEITADAFPDQKF 287

Query: 361 KKFKAIIEKIDP 372
                 + ++  
Sbjct: 288 G---GTVYRVST 296


>gi|148241496|ref|YP_001226653.1| hypothetical protein SynRCC307_0397 [Synechococcus sp. RCC307]
 gi|147849806|emb|CAK27300.1| Possible membrane-fusion protein [Synechococcus sp. RCC307]
          Length = 400

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 95/292 (32%), Gaps = 31/292 (10%)

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +     L+ +    + +    LG Y +T   V    ++++     ++L       + + +
Sbjct: 27  SQGPKPLQVSTAVLQPEQFRELGDYVATLEAVNQVQLAALADGRVVELPVEEGQQVEQGE 86

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +  + S         Q    + +   +  AV Q DL +  R   +           ++  
Sbjct: 87  VLLRLSSEERQAELIQAQAELSRRRADVAAV-QADLERDRRNFERY------RYLAKEGA 139

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
              ++    +A+   +    E ++DL +         + L +     + KT+ +PI+G +
Sbjct: 140 ANALDLDSFKASFLASQAKLEANQDLVEA------AEAGLGVARTRLDYKTVRAPISGQV 193

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                    +  ++  P   IV  +   Y +  +     +  K G    +          
Sbjct: 194 SDLSV-KLGDVVKERDPFTAIV-RNDRLYTQITIPVTMAERTKPGLPVWL----LDPTNG 247

Query: 361 KKF-KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
            +  K  ++ +DP +      L           +    FS+    LR+G   
Sbjct: 248 IELAKGELKFVDPDVKVATQGL-----------LAKAEFSNPGNRLRSGMRV 288



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 4/140 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN--- 121
           G + +  VE G Q+ QG  LL     E    +   +  +   R  +   ++ L+      
Sbjct: 69  GRVVELPVEEGQQVEQGEVLLRLSSEERQAELIQAQAELSRRRADVAAVQADLERDRRNF 128

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLD 180
            +Y  L K   +    L  F   + ++ +K+             + + R R  Y   R  
Sbjct: 129 ERYRYLAKEGAANALDLDSFKASFLASQAKLEANQDLVEAAEAGLGVARTRLDYKTVRAP 188

Query: 181 LENKSSLLRALLSSHQKDLT 200
           +  + S L   L    K+  
Sbjct: 189 ISGQVSDLSVKLGDVVKERD 208


>gi|121602998|ref|YP_980327.1| RND family efflux transporter MFP subunit [Polaromonas
           naphthalenivorans CJ2]
 gi|120591967|gb|ABM35406.1| efflux transporter, RND family, MFP subunit [Polaromonas
           naphthalenivorans CJ2]
          Length = 414

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 84/274 (30%), Gaps = 35/274 (12%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + ++       +    ++ +    +   +             A  +S ++D    + 
Sbjct: 85  LRLSDAEARAALQQASAALVEARGRATQQATVAAPVAGQAVVQAEAAFTSAERDFQRARE 144

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L  +   SQ  L+   R +  +   L+    + +                 AN    + R
Sbjct: 145 LVAQGFFSQQKLDDARRALDTARSALQSARVQAQ-----------------ANQPSGVER 187

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L  ++      ++ + I +    + +I SP+   ++  +S    + AQ    L+ +   
Sbjct: 188 TLAASR--VDQALAAVDIAQARLARLSIASPVDAIVLT-RSVEPGSMAQPGHVLLTLAAQ 244

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                I A V  K ++ +  G  A      Y     + F A +  I P +  Q   +   
Sbjct: 245 GGT-RIDANVDEKNLRLLTPGMPAKAVADAYP---GQSFDAQLNYIAPAVDPQRGTV--- 297

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
              EV L + +         LR      V     
Sbjct: 298 ---EVRLAVPNPPPF-----LRPDMTVSVELVGG 323



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 66/189 (34%), Gaps = 6/189 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV ++G +     + +I +  +  + + +V  G ++  G  LL   D E    +   
Sbjct: 41  IVQSVVATGRLNAPARM-DIGAEVTATVLEVRVREGDRVRAGALLLRLSDAEARAALQQA 99

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKA----FESREEQLLDFLGKYHSTCSKVFNY 155
             ++   R     + +    +  +  V  +A     E   ++  + + +   +  K+ + 
Sbjct: 100 SAALVEARGRATQQATVAAPVAGQAVVQAEAAFTSAERDFQRARELVAQGFFSQQKLDDA 159

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             +       ++  R+++       +E   +  R   +    D+   + L   +  S  D
Sbjct: 160 RRALDTARSALQSARVQAQANQPSGVERTLAASRVDQALAAVDIAQAR-LARLSIASPVD 218

Query: 216 LNQQERIVY 224
                R V 
Sbjct: 219 AIVLTRSVE 227


>gi|300907122|ref|ZP_07124788.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 84-1]
 gi|301303549|ref|ZP_07209671.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 124-1]
 gi|300401167|gb|EFJ84705.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 84-1]
 gi|300841048|gb|EFK68808.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 124-1]
 gi|315257780|gb|EFU37748.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 85-1]
          Length = 331

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLILAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|296445260|ref|ZP_06887219.1| Activator of Hsp90 ATPase 1 family protein [Methylosinus
           trichosporium OB3b]
 gi|296257215|gb|EFH04283.1| Activator of Hsp90 ATPase 1 family protein [Methylosinus
           trichosporium OB3b]
          Length = 461

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 59/228 (25%), Gaps = 29/228 (12%)

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +  ++D    ++  E    +  +  Q ER   +   +  E                    
Sbjct: 261 TIDERDHEAARDRAETALAAAQERLQSERSRVELATDAVEREKRAGKRRAGARAADKAQA 320

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                  +E   +   N+   A          +T  +  ILS I G +V  ++       
Sbjct: 321 ALADAQRREAQAETAFNEAQAA-----FASAIETVTKSRILSSIDGAVVS-RNAEVGAKV 374

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            ++  L  + P      I A         V  G  A+       D       A + + D 
Sbjct: 375 AEADELFVVAPAPLALQIEAHAA--DASAVHVGDKASFTVDALGDRAFTGTVAKLGEADL 432

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           ++                        +D +  L+ G  A V       
Sbjct: 433 VVIDA---------------------ADPDHALKPGMTANVEIETGAR 459


>gi|148558027|ref|YP_001257448.1| HlyD family secretion protein [Brucella ovis ATCC 25840]
 gi|148369312|gb|ABQ62184.1| HlyD family secretion protein [Brucella ovis ATCC 25840]
          Length = 349

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 87/280 (31%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 77  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 136

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++     +    +  + +       +       D+A    A   +++   +   + 
Sbjct: 137 NTVRVD----TLLPRGVTTQSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 192

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 193 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVPAVK-- 249

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 250 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 306

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 307 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 346


>gi|310642454|ref|YP_003947212.1| multidrug resistance protein a [Paenibacillus polymyxa SC2]
 gi|309247404|gb|ADO56971.1| multidrug resistance protein A [Paenibacillus polymyxa SC2]
          Length = 217

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 62/188 (32%), Gaps = 11/188 (5%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            +   +     ++  + + E ++   E    L++N+     ++S L        +  + +
Sbjct: 35  SDDARIQADQYKVMPQISGEISHIDVEEGDVLQRNEPIAEQDVSGLDASM--ISKSVLRA 92

Query: 295 PIAGTIVYNQS--FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           PI GT++   S              +  +V      Y+   +    I  +K G    +  
Sbjct: 93  PINGTVIKIYSKEHEIG---TPGSAVATMV-DMNNLYVSTNIEETDINRIKPGQLVDITL 148

Query: 353 PHY-ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIELRNGF 409
                 + + K + + E  + + S       +  + +V   + +        +++L  G 
Sbjct: 149 DAAGDQVIQGKVRKVGEASNAVFSLVPAVNTSGNFNKVTQRVPVEIAVNKPKDMKLIPGT 208

Query: 410 PAEVLFTA 417
             EV    
Sbjct: 209 NVEVKIHT 216


>gi|255658482|ref|ZP_05403891.1| auxiliary transport protein, membrane fusion protein [Mitsuokella
           multacida DSM 20544]
 gi|260849280|gb|EEX69287.1| auxiliary transport protein, membrane fusion protein [Mitsuokella
           multacida DSM 20544]
          Length = 370

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 77/262 (29%), Gaps = 50/262 (19%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + K  V+ G  +  G  ++  +  +T   I+  K  I  L   I +          K
Sbjct: 57  SGRLLKEAVKEGDTVKAGDVIMELDPTDTDLSIERTKAQIAQLDAQIRSTGGTQSVNYMK 116

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D  E                                           +  +        
Sbjct: 117 ADSDE-------------------------------------------QQSFRQIDQQRA 133

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             S  +A   + Q D      L +  A++++ L+  E  +  +   + +       +L  
Sbjct: 134 AVSAAQATFKNSQVDYNRKAALLDAGAIAKSQLDDAEMALSVAEANVTQQQQLLDKLLSG 193

Query: 244 INEL--YDEANLEFANYLKEISRDLEQNQRTFADEMS----KLTILEKTREQKTILSPIA 297
             +    D  NL      +E + ++  +      +      +L  LE  +E+ T+ +P  
Sbjct: 194 AQDTGNTDSINLPTIAQQREAAGNMSNDIDALMQQKQALVVQLKQLEVQKERLTLRAPED 253

Query: 298 GTIVYNQSFSSSNYAQQSQPLM 319
           G I+   +           P++
Sbjct: 254 GRIIKVLA-KEGEMVAAGTPVV 274


>gi|241760185|ref|ZP_04758282.1| multidrug resistance protein A [Neisseria flavescens SK114]
 gi|241319382|gb|EER55840.1| multidrug resistance protein A [Neisseria flavescens SK114]
          Length = 396

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 84/273 (30%), Gaps = 31/273 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F          L   + + +         + +  L +A L+  Q DL   ++L    AVS
Sbjct: 102 FQLAYDRAQNELIQAIRQNKQQAAVNSKAKAQVLLRKADLARVQADLRRRESLAGTEAVS 161

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +L+     V ++   ++    E+ +    +                         Q  
Sbjct: 162 GEELSHARAAVVQAQAAVKAVEAEEVSAQVALGNNIPLRQ-----------------QPA 204

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +S +       ++  I SPI+G I             Q  P+M +VP S+  ++ A
Sbjct: 205 VQTAISHIKDAWLNLQRTQIRSPISGQIAKRNV-QVGQRIAQGTPMMAVVPLSE-LWVDA 262

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQ 384
                Q++ +K G    +    Y       +   +  +          + +Q       +
Sbjct: 263 NFKESQLRKMKIGQPVEMTADLYGSKV--VYHGKVMGLSAGTGSAFSLLPAQNATGNWIK 320

Query: 385 EYYEVILKITDLAFSDNNIELRNG--FPAEVLF 415
               V ++I+  A       LR G     +V  
Sbjct: 321 VVQRVPVRISLDAKELQQNPLRVGLSMTVKVDI 353


>gi|226328860|ref|ZP_03804378.1| hypothetical protein PROPEN_02761 [Proteus penneri ATCC 35198]
 gi|225202046|gb|EEG84400.1| hypothetical protein PROPEN_02761 [Proteus penneri ATCC 35198]
          Length = 47

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 7/32 (21%), Positives = 14/32 (43%)

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
           +L+ G P +V     + +L   +  P+ D   
Sbjct: 10  KLKAGMPVDVFINTGDRSLLNYLFKPVLDRIH 41


>gi|222150671|ref|YP_002559824.1| multidurg resistance protein A homolog [Macrococcus caseolyticus
           JCSC5402]
 gi|222119793|dbj|BAH17128.1| multidurg resistance protein A homolog [Macrococcus caseolyticus
           JCSC5402]
          Length = 216

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 11/132 (8%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I  P  GTIV  Q+ + + +     P+          ++ A +   ++  +KKG    V
Sbjct: 88  DIKMPQDGTIVKKQA-TENGFVGAGTPIAY-AYDMNQLFVTANIKETELDGIKKGQEVDV 145

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI--LKITDLAFSDNNIE 404
               Y D         +E+I    +       ++     + +V   + +      D +++
Sbjct: 146 YVDGYKDTT---LSGEVEQIGLATASSFSLLPSSNGNANFTKVTQVVPVKIKLSKDKSLD 202

Query: 405 LRNGFPAEVLFT 416
           +  G    V   
Sbjct: 203 ILPGMNVTVRIH 214


>gi|163761628|ref|ZP_02168698.1| efflux transporter, RND family, MFP subunit [Hoeflea phototrophica
           DFL-43]
 gi|162281122|gb|EDQ31423.1| efflux transporter, RND family, MFP subunit [Hoeflea phototrophica
           DFL-43]
          Length = 381

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 59/197 (29%), Gaps = 18/197 (9%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
              + R  + E    L    +   E            S   +  +   A   S+L   E 
Sbjct: 114 LEGDERGAMVETGRALLEQRKKEMENAERLVASGILPSTQADNARSALASARSQLETAEA 173

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             ++ T+++P +G I          +    + +  ++          +V+ + I HV+ G
Sbjct: 174 DVDRLTVVAPFSGVIDQVLV-EEGAWMPSGEAVAVLL-QLDPVLALGEVSERDIVHVQVG 231

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
             A VR      I        +  I    +                   ++A  +     
Sbjct: 232 SEADVRL-----ISGAVVTGKVRHISLEATSGTRTF-----------PIEIAIPNPENRT 275

Query: 406 RNGFPAEVLFTAKNTTL 422
            +G  AE++  +K  T 
Sbjct: 276 PSGMTAEIMIKSKAVTA 292



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/126 (11%), Positives = 48/126 (38%), Gaps = 5/126 (3%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            +  SG +   D    + +  +GI+ + +VE G ++  G  +L  E  E   +++  +  
Sbjct: 71  IIRVSG-VTAPDKRSTLATRSAGILGELRVEKGDRVNAGDVILVLEGDERGAMVETGRAL 129

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           ++  +  ++      + L     +     ++    L     +  +  + V    + + + 
Sbjct: 130 LEQRKKEME----NAERLVASGILPSTQADNARSALASARSQLETAEADVDRLTVVAPFS 185

Query: 163 SLKMKL 168
            +  ++
Sbjct: 186 GVIDQV 191


>gi|312969184|ref|ZP_07783391.1| hlyD family secretion family protein [Escherichia coli 2362-75]
 gi|312286586|gb|EFR14499.1| hlyD family secretion family protein [Escherichia coli 2362-75]
          Length = 331

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENTRSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 37.3 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENTRSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|291539959|emb|CBL13070.1| RND family efflux transporter, MFP subunit [Roseburia intestinalis
           XB6B4]
          Length = 482

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 97/326 (29%), Gaps = 48/326 (14%)

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G Q+  G  LL   D            SI+  R  +            K  V E + +  
Sbjct: 111 GQQVKAGDALLKLTD-----------ESIEKYRKKL------------KEAVTEASADYN 147

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
              L     K  +  S   +    SV                   +L++     +  +  
Sbjct: 148 SAALSSAKEKVSANYSYNLSVAEGSV---------AQEEYEATISELQDAVDEAQEAVDE 198

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q  LT  + + +        L  ++    K   +L+              + Y EA L 
Sbjct: 199 SQALLTYYQEMIDSGMDLSESLADEQENYDKLYNKLKAAKSAYTTKSVEAEKKYKEAMLS 258

Query: 255 FANYLKEISRD-------LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
           + N   + S D       +   Q T  D    L+  E      TI S   GTI+    + 
Sbjct: 259 YENADSQYSADVTGVDVSVNTAQDTLTDAKEALSEFEIFVGDGTIYSDYDGTIMSVG-YE 317

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
           + +       ++     +    +   V+ + I  +  G    +    Y D     F   +
Sbjct: 318 AGDDLSAGTSIVTFA-DTDAVTMTVSVSEEDISEIVIGDEVMIELNAYEDQT---FSGEV 373

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKI 393
           E ID  +S   + +     Y V +KI
Sbjct: 374 ESIDTSVSSGSSTVS----YNVTVKI 395


>gi|260886802|ref|ZP_05898065.1| putative periplasmic component of efflux system [Selenomonas
           sputigena ATCC 35185]
 gi|330839389|ref|YP_004413969.1| efflux transporter, RND family, MFP subunit [Selenomonas sputigena
           ATCC 35185]
 gi|260863401|gb|EEX77901.1| putative periplasmic component of efflux system [Selenomonas
           sputigena ATCC 35185]
 gi|329747153|gb|AEC00510.1| efflux transporter, RND family, MFP subunit [Selenomonas sputigena
           ATCC 35185]
          Length = 380

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 87/279 (31%), Gaps = 26/279 (9%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDL 216
            +      M+ +   +  + R+++++  S    ++     +++       KN  V +ND+
Sbjct: 35  EAQQAEKAMRESAGETATVVRMEMKSTVSATGTIIPVDSVEVSSKITARIKNVLVKENDI 94

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
                 V     +      +Q        +   +      +         E  Q  +   
Sbjct: 95  VTAGETVATLDAKSLATKRDQAQFKVTNAKAKYDREAYLYSIGANPQTTFEDAQYNYDAA 154

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP----LMKIVPHSKLTYIRA 332
            S L   E    +  I +PI+G +V  +  ++   A         +M+I   SK   + A
Sbjct: 155 KSVLEETESDLAETIIQAPISGIVVG-KPKTAGTMATAGTDYPTVIMRIADLSKKQIM-A 212

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD-----------NNL 381
           KV    I ++K    AT     ++    K F A + KI    +               + 
Sbjct: 213 KVDETDIGNIKVDQQATFTVDAHS---GKTFTARVSKISQTDTANTWQTVSSSSTTTTST 269

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +  YY V L + D         L     A +       
Sbjct: 270 ASVIYYYVTLDVDDPENL-----LLPAMTARLEIETATK 303



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 1/119 (0%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +VS++G I+  D+V E+ S  +  IK   V+    +  G  + T +        D  + 
Sbjct: 60  STVSATGTIIPVDSV-EVSSKITARIKNVLVKENDIVTAGETVATLDAKSLATKRDQAQF 118

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            + N +   D E        N     E A  + +                +    IS +
Sbjct: 119 KVTNAKAKYDREAYLYSIGANPQTTFEDAQYNYDAAKSVLEETESDLAETIIQAPISGI 177


>gi|237727159|ref|ZP_04557640.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229434015|gb|EEO44092.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 407

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 69/226 (30%), Gaps = 21/226 (9%)

Query: 204 NLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQ--KNMLRHINELYDEANLEFANYLK 260
           ++ +K   +++ D    +  +  +      N  E   +  L   N    E  L      +
Sbjct: 80  SVVKKGELIAEMDKVTLQSELQSAKATYDGNKAEYDYQKKLYDRNRKLHEKQLISDTDYE 139

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QP 317
           E   + ++ Q       + L   E+     TI SPI G +   +                
Sbjct: 140 ETVYNFQRAQSALEQSKAALAKAERNLSYATITSPIDGVVTS-RDVEEGQTVASGFETPT 198

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------D 371
           L  I        + A V    I  V++G   T     Y D     F+ ++ +I       
Sbjct: 199 LFTIAADLTKMQVVADVDEADIAGVEEGARVTFTVDAYPDD---VFEGVVRQIRLGSTNS 255

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
              S       T   YEV++        + +++L+    A      
Sbjct: 256 TSSSSSTTTSTTVVTYEVVITAD-----NPDLKLKPRLTANATIYT 296



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 51/142 (35%), Gaps = 1/142 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++++G I     V E+ +  SGII K  V+  S + +G  +   + +     +   K + 
Sbjct: 49  ITATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSVVKKGELIAEMDKVTLQSELQSAKATY 107

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +   D +K   D     ++    +    EE + +F     +          +    S
Sbjct: 108 DGNKAEYDYQKKLYDRNRKLHEKQLISDTDYEETVYNFQRAQSALEQSKAALAKAERNLS 167

Query: 164 LKMKLTRMRSIYLNRLDLENKS 185
                + +  +  +R   E ++
Sbjct: 168 YATITSPIDGVVTSRDVEEGQT 189


>gi|255692084|ref|ZP_05415759.1| efflux transporter, RND family, MFP subunit [Bacteroides finegoldii
           DSM 17565]
 gi|260622236|gb|EEX45107.1| efflux transporter, RND family, MFP subunit [Bacteroides finegoldii
           DSM 17565]
          Length = 409

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 71/216 (32%), Gaps = 18/216 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDL 266
             +++ D    +  +            E +   ++        E +L      ++   + 
Sbjct: 86  QLIAEMDRVTLQSELASQQATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ + ++    + L   E+     TI SPI G ++  +   +            L  I  
Sbjct: 146 QKAKSSYDSSKASLAKAERNLSYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI----DPIISQQDN 379
                 + A V    I  V++G  A+     Y +     F+ ++ +I        S    
Sbjct: 205 DLTQMQVVADVDEADIGGVEEGQRASFTVDAYPNDT---FEGVVTQIRLGDASSTSSTST 261

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +  T   YEV++        + +++L+    A V  
Sbjct: 262 SSSTVVTYEVVISAP-----NPDLKLKPRLTANVTI 292



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 65/172 (37%), Gaps = 21/172 (12%)

Query: 20  MTLLSIIGIIGLITW-------------SILL----PIEISVSSSGEILNEDNVVEIKSP 62
           +  +++I ++G+  W             + +      I  SV+++G I     V E+ + 
Sbjct: 8   LIAVAVIAVVGIGIWFFTGSPAKHKVTYATVAVSKGDISNSVTATGTIEPVTEV-EVGTQ 66

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF--- 119
            SGII K  V+  S + +G  +   + +     +  ++ +    +   + +K   +    
Sbjct: 67  VSGIIDKIYVDYNSTVTKGQLIAEMDRVTLQSELASQQATYDGAKAEYEYQKKNYERSKG 126

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           L+ K  + +  FE            Y S+ + +     +  Y ++   +  +
Sbjct: 127 LHEKSLISDTDFEQALYNYQKAKSSYDSSKASLAKAERNLSYATITSPIDGV 178


>gi|150389151|ref|YP_001319200.1| RND family efflux transporter MFP subunit [Alkaliphilus
           metalliredigens QYMF]
 gi|149949013|gb|ABR47541.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
           metalliredigens QYMF]
          Length = 396

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 49/341 (14%), Positives = 99/341 (29%), Gaps = 88/341 (25%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G I++  V+ G QI +G  L+   +              ++LR  ++  K+  +    
Sbjct: 63  TGGKIEEIYVKTGQQINKGDKLIRLNE--------------EDLRSTVNVAKAQYEIAET 108

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +Y++  K     E                                              +
Sbjct: 109 QYNMAMKGATEEEIN------------------------------------------QAK 126

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
               +    L + ++     + L E  AVS   L + +  +     +L            
Sbjct: 127 ISVEMAERNLENTKELYGKYQELLEAGAVSPQQLQEIKLKLDLEEKQLNSA--------- 177

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                  EA        ++    + ++Q   A   +     +   E   + S I G I+ 
Sbjct: 178 ------KEAYNRILKGARDDELQILKSQIDIA--YAAYQQSQDLLEDSILRSDIDGVILQ 229

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            Q     +Y  Q  P++ I    + T +   V+ + I  +  G    VR       +  +
Sbjct: 230 IQV-KEGDYISQEMPVIII--KGEETTVMVGVSNEDISKIALGMDVIVR------HQNNE 280

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            K I+E +        N       YEV + +        ++
Sbjct: 281 VKGIVETVS------SNPKSQSSLYEVKVDLEPNTIPIGSL 315


>gi|212694883|ref|ZP_03303011.1| hypothetical protein BACDOR_04417 [Bacteroides dorei DSM 17855]
 gi|265750440|ref|ZP_06086503.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212662561|gb|EEB23135.1| hypothetical protein BACDOR_04417 [Bacteroides dorei DSM 17855]
 gi|263237336|gb|EEZ22786.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 407

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 69/226 (30%), Gaps = 21/226 (9%)

Query: 204 NLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQ--KNMLRHINELYDEANLEFANYLK 260
           ++ +K   +++ D    +  +  +      N  E   +  L   N    E  L      +
Sbjct: 80  SVVKKGELIAEMDKVTLQSELQSAKATYDGNKAEYDYQKKLYDRNRKLHEKQLISDTDYE 139

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QP 317
           E   + ++ Q       + L   E+     TI SPI G +   +                
Sbjct: 140 ETVYNFQRAQSALEQSKAALAKAERNLSYATITSPIDGVVTS-RDVEEGQTVASGFETPT 198

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------D 371
           L  I        + A V    I  V++G   T     Y D     F+ ++ +I       
Sbjct: 199 LFTIAADLTKMQVVADVDEADIAGVEEGARVTFTVDAYPDD---VFEGVVRQIRLGSTNS 255

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
              S       T   YEV++        + +++L+    A      
Sbjct: 256 TSSSSSTTTSTTVVTYEVVITAD-----NPDLKLKPRLTANATIYT 296



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 51/142 (35%), Gaps = 1/142 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++++G I     V E+ +  SGII K  V+  S + +G  +   + +     +   K + 
Sbjct: 49  ITATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSVVKKGELIAEMDKVTLQSELQSAKATY 107

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +   D +K   D     ++    +    EE + +F     +          +    S
Sbjct: 108 DGNKAEYDYQKKLYDRNRKLHEKQLISDTDYEETVYNFQRAQSALEQSKAALAKAERNLS 167

Query: 164 LKMKLTRMRSIYLNRLDLENKS 185
                + +  +  +R   E ++
Sbjct: 168 YATITSPIDGVVTSRDVEEGQT 189


>gi|309786549|ref|ZP_07681172.1| hlyD family secretion family protein [Shigella dysenteriae 1617]
 gi|308925612|gb|EFP71096.1| hlyD family secretion family protein [Shigella dysenteriae 1617]
          Length = 331

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|322435097|ref|YP_004217309.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX9]
 gi|321162824|gb|ADW68529.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX9]
          Length = 400

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 90/291 (30%), Gaps = 26/291 (8%)

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           GK H           S +   L   +            L+ +  L +             
Sbjct: 58  GKVHPITQVEVKSKASGIVTQLSTDINDTVRRGQVLAQLDQQEILDQVAAQKATLAAAES 117

Query: 203 KNLFEKNAVSQNDLNQQERIV------YKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                ++A+  + +N +   +      Y    ++  +       L    + Y  AN    
Sbjct: 118 NAHAAESAIVLDRVNAEAPDLPMIKHTYDRARQMNSDGVVSAQALDDAQQRYLAANNTRD 177

Query: 257 NYLKEISRD---LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN--- 310
             L +I+ D   L Q Q   A   + L  L++     TI SP+ G ++            
Sbjct: 178 KALSQITIDTAKLRQAQAQVAQAEAALKQLQEQLSYTTITSPMDGVVLSRDVEKGDAVSS 237

Query: 311 --YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                 +  L+  V      Y++ KV    I  V     A ++   + D   K F   + 
Sbjct: 238 ILVLGSTATLVMTVGDIHQVYVQGKVDEADIGKVYMDQPARIKVESFKD---KTFLGKVT 294

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +I P+  ++DN       +EV + I      +   EL++   A        
Sbjct: 295 RIAPLGVEKDNVTT----FEVRVSID-----NPGGELKSNMTANAEILLDE 336



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 76/231 (32%), Gaps = 16/231 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV ++G++     V E+KS  SGI+ +   +    + +G  L   +  E  D +  +
Sbjct: 50  IAKSVVATGKVHPITQV-EVKSKASGIVTQLSTDINDTVRRGQVLAQLDQQEILDQVAAQ 108

Query: 100 KVSIKNLRC------------HIDTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKY 145
           K ++                  ++ E   L  + + YD   +         Q LD   + 
Sbjct: 109 KATLAAAESNAHAAESAIVLDRVNAEAPDLPMIKHTYDRARQMNSDGVVSAQALDDAQQR 168

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           +   +   +  +S +             +      L+     L     +   D  ++   
Sbjct: 169 YLAANNTRDKALSQITIDTAKLRQAQAQVAQAEAALKQLQEQLSYTTITSPMDGVVLSRD 228

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            EK  AVS   +      +  +  ++ +   + K     I ++Y +     
Sbjct: 229 VEKGDAVSSILVLGSTATLVMTVGDIHQVYVQGKVDEADIGKVYMDQPARI 279


>gi|260550394|ref|ZP_05824605.1| HlyD family secretion family protein [Acinetobacter sp. RUH2624]
 gi|260406500|gb|EEW99981.1| HlyD family secretion family protein [Acinetobacter sp. RUH2624]
          Length = 359

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 107/316 (33%), Gaps = 18/316 (5%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +++E++   ++  +  +L        +++L     +      +      +  + +    +
Sbjct: 51  LNSEQTDNSYIKGQTTILSSQINGYVKRVLVKDFDHVKKGQPLLIIDAQTYDQKVVQAQS 110

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            +     N  + +   +  +A ++S Q  +  ++  ++ +       +Q       S  E
Sbjct: 111 MVEQAKNNLANQQQTIAQRQADIASAQAKVDQIQAEYDLSVAESKRYSQLGSSGAASQSE 170

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             +    ++N L  + +     ++     LK         Q    +  ++L   + T+  
Sbjct: 171 QDKAFANERNNLALLKQALANLSV-AKEALKTAQVAKVGLQAEVNNAQAQLDQAKTTKNY 229

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I +P+ G  +   +     Y      L+ ++P        A     Q+++++ G  AT
Sbjct: 230 SVIYAPMDGQ-LGEVNPRVGQYVSVGSQLLFLIPQKTWVI--ANFKETQMKNMRIGQKAT 286

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT---DLAFSDNN 402
                    +   F   +E+I P    +      +  T  + +V+ +I     +  +  +
Sbjct: 287 FTVDALGHQK---FTGHVEEISPAAGSEFSVIKPDNATGNFTKVVQRIAVRIAIDPNQKD 343

Query: 403 I-ELRNGFPAEVLFTA 417
           +  L  G       T 
Sbjct: 344 LNRLSPGMSV---ITT 356



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 61/162 (37%), Gaps = 19/162 (11%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNL 106
                + S  +G +K+  V++   + +G PLL  +        ++   +++  K ++ N 
Sbjct: 63  GQTTILSSQINGYVKRVLVKDFDHVKKGQPLLIIDAQTYDQKVVQAQSMVEQAKNNLANQ 122

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFE------SREEQLLDFLGKYHSTCSKVFNYG---- 156
           +  I   ++ +     K D ++  ++       R  QL        S   K F       
Sbjct: 123 QQTIAQRQADIASAQAKVDQIQAEYDLSVAESKRYSQLGSSGAASQSEQDKAFANERNNL 182

Query: 157 --ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             +     +L +    +++  + ++ L+ + +  +A L   +
Sbjct: 183 ALLKQALANLSVAKEALKTAQVAKVGLQAEVNNAQAQLDQAK 224


>gi|242278022|ref|YP_002990151.1| efflux transporter RND family, MFP subunit [Desulfovibrio
           salexigens DSM 2638]
 gi|242120916|gb|ACS78612.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           salexigens DSM 2638]
          Length = 385

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 68/248 (27%), Gaps = 31/248 (12%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +E     +   ++   G+      K+           L+     ++S            +
Sbjct: 74  IEAQVTGKVLNVMVRSGQKVRKGDKLIVLDSREFKTRLESAQQGLKSAQAAERQAREAIN 133

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +A   +       MK LF     +Q++L++ E    K+   L +           + +
Sbjct: 134 AAKAESGTATATWKRMKKLFADEVATQDELDRVEAAYLKARAALAQAEDGLDAASAGVRQ 193

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                     N                              +  TI +P  G +   +  
Sbjct: 194 ARKGVEAALIN-----------------------------LDYTTITAPADGEVAK-RMV 223

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
              + A   +PLM I        + A V    I  V+ G    V      +  E   + +
Sbjct: 224 EPGDLAFPGKPLMMIQ-TGGTLRLEALVREGVIGQVRIGQKLDVDIQALGEKGEAVVEEV 282

Query: 367 IEKIDPII 374
           +   DP+ 
Sbjct: 283 VPSADPLT 290



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/222 (10%), Positives = 76/222 (34%), Gaps = 6/222 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +  E     I++  +G +    V +G ++ +G  L+  +  E    ++  +  +K+
Sbjct: 62  AVGTVRPETEA-SIEAQVTGKVLNVMVRSGQKVRKGDKLIVLDSREFKTRLESAQQGLKS 120

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--KVFNYGISSVYRS 163
            +      + A++    +       ++  ++   D +            +    +++ ++
Sbjct: 121 AQAAERQAREAINAAKAESGTATATWKRMKKLFADEVATQDELDRVEAAYLKARAALAQA 180

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS---QNDLNQQE 220
                     +   R  +E     L     +   D  + K + E   ++   +  +  Q 
Sbjct: 181 EDGLDAASAGVRQARKGVEAALINLDYTTITAPADGEVAKRMVEPGDLAFPGKPLMMIQT 240

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
               +    +RE +  Q  + + ++        +    ++E+
Sbjct: 241 GGTLRLEALVREGVIGQVRIGQKLDVDIQALGEKGEAVVEEV 282


>gi|83815478|ref|YP_446939.1| membrane fusion efflux protein, putative [Salinibacter ruber DSM
           13855]
 gi|83756872|gb|ABC44985.1| membrane fusion efflux protein, putative [Salinibacter ruber DSM
           13855]
          Length = 465

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 75/280 (26%), Gaps = 7/280 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   V++ G    E  V EI    SG I +  V+ G  + QG  L   +  +    ++  
Sbjct: 65  ITEVVTAFGRAQPEVEV-EISPDVSGEIVELPVKEGDVVQQGDLLARLKADDYRAAVERA 123

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +   +  +   ++        YD  +K +E       DF     +    V     + 
Sbjct: 124 EAGVSEAKATLAQRRADSVQARRTYDRQKKLYEKEVVSASDFEDAKSTYEQAVAQLQAAR 183

Query: 160 VY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               S +  L   R            S  L  L     + +   +       +  + L Q
Sbjct: 184 FRVESARADLQDAREQLQKTRIYAPMSGTLTRLEVEEGERVVGTQQRAGTEMMRVSRLGQ 243

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E  V  +  ++          +                         E +Q    +   
Sbjct: 244 MELEVDVNESDVVNVASRDSATIEFDAHPDRSFQGAVTEIANSARIQNEGSQNEVTNFPV 303

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSN---YAQQS 315
            + +L+       + S   G I   +           +  
Sbjct: 304 TIRVLDNP--NTGLTSGDEGAIARPEVPREGARSPVIRPG 341



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 71/238 (29%), Gaps = 35/238 (14%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY---------LKEIS 263
           +  + + E  V ++   L +   +     R  +        E  +           ++  
Sbjct: 117 RAAVERAEAGVSEAKATLAQRRADSVQARRTYDRQKKLYEKEVVSASDFEDAKSTYEQAV 176

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA----QQSQPLM 319
             L+  +       + L    +  ++  I +P++GT+   +            +    +M
Sbjct: 177 AQLQAARFRVESARADLQDAREQLQKTRIYAPMSGTLTRLEVEEGERVVGTQQRAGTEMM 236

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           + V       +   V    + +V    +AT+ F  + D   +     I     I ++   
Sbjct: 237 R-VSRLGQMELEVDVNESDVVNVASRDSATIEFDAHPDRSFQGAVTEIANSARIQNEGSQ 295

Query: 380 NLQTQEYYEVILKI-----------TDLAFSDNNIE--------LRNGFPAEVLFTAK 418
           N  T   + V +++            + A +   +         +R G    V    +
Sbjct: 296 NEVTN--FPVTIRVLDNPNTGLTSGDEGAIARPEVPREGARSPVIRPGMSGAVDIYTE 351


>gi|262039167|ref|ZP_06012487.1| putative acriflavin resistance protein E [Leptotrichia goodfellowii
           F0264]
 gi|261746783|gb|EEY34302.1| putative acriflavin resistance protein E [Leptotrichia goodfellowii
           F0264]
          Length = 347

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 59/200 (29%), Gaps = 21/200 (10%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +I+     +   +  +  +   +   +  E   +          D    +  +    + L
Sbjct: 92  QIILGIDNQAARSNVQSASANYNAARIQYEKYSQLYQKRLITETDYLNAKTNYESASANL 151

Query: 281 TILEKTREQKTILSPIAGTIVYNQS--FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            +   +  +  I + I G I                 Q L KIV +     I+  V+P  
Sbjct: 152 ALANDSNSKSAIKADIDGVISGLTLERHQQ---ISAGQTLFKIV-NESEMEIKVGVSPNA 207

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  +K G  A ++         K+    + +I      +         + V ++I +   
Sbjct: 208 ISKIKVGTNAKIKIDELN----KEVSGKVYEISGTADTKTRQ------FIVKIRIPNPEK 257

Query: 399 SDNNIELRNGFPAEVLFTAK 418
                E+++G          
Sbjct: 258 -----EIKSGMYGTASIDTG 272



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 34/124 (27%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V++G  +  G  +L  ++      +     +    R   +            
Sbjct: 74  SGELTVLNVKDGDTVHAGQIILGIDNQAARSNVQSASANYNAARIQYEKYSQLYQKRLIT 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                 A  + E    +      S         I  V   L ++  +  S       + N
Sbjct: 134 ETDYLNAKTNYESASANLALANDSNSKSAIKADIDGVISGLTLERHQQISAGQTLFKIVN 193

Query: 184 KSSL 187
           +S +
Sbjct: 194 ESEM 197


>gi|300776399|ref|ZP_07086257.1| methyl-accepting chemotaxis sensory transducer [Chryseobacterium
           gleum ATCC 35910]
 gi|300501909|gb|EFK33049.1| methyl-accepting chemotaxis sensory transducer [Chryseobacterium
           gleum ATCC 35910]
          Length = 403

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 61/132 (46%), Gaps = 3/132 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  V ++G+I+ ++ + EIK   +GII K  V+ G ++  G  + T + + +   ++  +
Sbjct: 52  DDKVMATGKIVPKEEI-EIKPNIAGIIDKILVKEGDKVEVGQLIATVKIVPSISEVNAAQ 110

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++N +  I   +  +  +  ++D+ EK ++       +FL       S+     + + 
Sbjct: 111 QEVQNAQIQISNAQMNVGNMQKQFDMQEKLYKQGVASKQEFLNSQQQLFSQ--QQTLKNA 168

Query: 161 YRSLKMKLTRMR 172
            + L     R++
Sbjct: 169 QQQLNTAQKRLQ 180



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/258 (10%), Positives = 71/258 (27%), Gaps = 44/258 (17%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +   ++ + +      + + + S  +  + + QK   M + L+++   S+ +    ++ +
Sbjct: 99  IVPSISEVNAAQQEVQNAQIQISNAQMNVGNMQKQFDMQEKLYKQGVASKQEFLNSQQQL 158

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           +     L       KN  + +N       +       E+                     
Sbjct: 159 FSQQQTL-------KNAQQQLNTAQKRLQIAKTGATPELKGQ------------------ 193

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYA-----QQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                   I S  +GT++     + S             +   V    +   + ++   Q
Sbjct: 194 --GLATTEIRSKASGTVLEVPVKAGSQVIEANNFNAGTTICS-VADLNVLIFKGEIDEAQ 250

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
              +++G    +      +         +  I P                +   +     
Sbjct: 251 AGKLREGMDMNIVIGALQNKTFP---GKLTMIAPKGKDNAGT--------IKFPVEGNVS 299

Query: 399 SDNNIELRNGFPAEVLFT 416
           + NN  +R GF A     
Sbjct: 300 NPNNEYIRAGFSANGEIV 317


>gi|90578101|ref|ZP_01233912.1| hypothetical protein VAS14_13659 [Vibrio angustum S14]
 gi|90441187|gb|EAS66367.1| hypothetical protein VAS14_13659 [Vibrio angustum S14]
          Length = 376

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 59/158 (37%), Gaps = 19/158 (12%)

Query: 18  KRMTLLSIIGIIGLITWSILLP----------------IEISVSSSGEILNEDNVVEIKS 61
           + + + ++  I  L  +++  P                IE    + G+I+    V  IKS
Sbjct: 4   RWIVVATLSAIATLGIYAVKAPSSDEHHFTMLTAKNATIEKQAIAVGQIMPAQAVK-IKS 62

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              GI+ K  V  G ++  G+P++      T    DL +V+   L+   D E + +   N
Sbjct: 63  QIEGIVDKIYVNLGDKVEAGSPVIKLRPNPTPQ--DLTRVNADLLKSKADLESAKIKLAN 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            K    +K   +  +  +       S  +++      S
Sbjct: 121 LKRLAAQKIISANFDAYIQAQADVKSRTAELKQKQQES 158



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 15/220 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQN 269
            DL +    + KS  +L     +  N+ R   +    AN    ++    +K  + +L+Q 
Sbjct: 95  QDLTRVNADLLKSKADLESAKIKLANLKRLAAQKIISANFDAYIQAQADVKSRTAELKQK 154

Query: 270 QRTFADEMSKLTI-LEKTREQKTILSPIAGTIVYNQS-----FSSSNYAQQSQPLMKIVP 323
           Q+  +D MSK       T+    I +PI GT++  +       +S+   Q +  +M +  
Sbjct: 155 QQE-SDLMSKGESDAGSTKLTSIIYAPINGTVLDVKVDVGEPITSTESNQAATEIMTMA- 212

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQ 382
             K    +  V+      + +G    +    Y D++   K   +  + + + +  +NN Q
Sbjct: 213 DMKSIIFKGSVSEHDAAQLTEGMPVELTIAPYPDLKIAGKLTKVAVQSEKLNNDSNNNQQ 272

Query: 383 TQEY-YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            Q +     ++++D+ F   +I LR+GF A    T K  T
Sbjct: 273 AQSFDNGFAVEVSDIKF-PKDITLRSGFTATAHITLKKAT 311


>gi|255012817|ref|ZP_05284943.1| periplasmic component of efflux system [Bacteroides sp. 2_1_7]
 gi|262382760|ref|ZP_06075897.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|301307816|ref|ZP_07213772.1| periplasmic component of efflux system [Bacteroides sp. 20_3]
 gi|262295638|gb|EEY83569.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|300834159|gb|EFK64773.1| periplasmic component of efflux system [Bacteroides sp. 20_3]
          Length = 408

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 76/223 (34%), Gaps = 20/223 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDL 266
             +++ D    +  +  +  +L  +  E +   ++        E  L      +  + + 
Sbjct: 85  QLIAEMDKINLQAELRSAEAQLASSKTEFEYQQKNYARSKVLHEKQLISDTDYETATYNY 144

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ +  +    + +  + +  E  TI SPI G +V N++               L  I  
Sbjct: 145 EKAKAAYDQSQASMVKVNRNLEYATITSPIDG-VVINRAVEEGQTVAAGFETPTLFTIAA 203

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------DPIISQQ 377
                 + A V    I +V++G   +     Y + +   F+ ++ +I          +  
Sbjct: 204 DLTKMQVIADVDEADIGNVEEGQRVSFTVDAYPNDQ---FEGVVRQIRLGDSESTSSASS 260

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +  T   YEV++        + +++L+    A V       
Sbjct: 261 STSSSTVVTYEVVITAD-----NPDLKLKPRLTANVTIYTLER 298



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 67/186 (36%), Gaps = 4/186 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +V+++G +     V E+ +  SGII K   +    +  G  +   + I     +   
Sbjct: 44  ITNTVTATGTVEPVTEV-EVGTQVSGIIDKLYADYNDVVKAGQLIAEMDKINLQAELRSA 102

Query: 100 KVSIKNLRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  + + +   + ++   +    L+ K  + +  +E+           Y  + + +    
Sbjct: 103 EAQLASSKTEFEYQQKNYARSKVLHEKQLISDTDYETATYNYEKAKAAYDQSQASMVKVN 162

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +  Y ++   +  +             +      L +   DLT M+ + + +     ++
Sbjct: 163 RNLEYATITSPIDGVVINRAVEEGQTVAAGFETPTLFTIAADLTKMQVIADVDEADIGNV 222

Query: 217 NQQERI 222
            + +R+
Sbjct: 223 EEGQRV 228


>gi|281421471|ref|ZP_06252470.1| efflux transporter, MFP component, RND family [Prevotella copri DSM
           18205]
 gi|281404543|gb|EFB35223.1| efflux transporter, MFP component, RND family [Prevotella copri DSM
           18205]
          Length = 417

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 99/306 (32%), Gaps = 78/306 (25%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS  G+++    V  I S   GI+ +  V+ G+ + +G  ++   +              
Sbjct: 63  VSVDGQVVPISVVQ-ISSEEGGIVLEKVVDEGAHVNKGDVIVKLSNSNLD---------- 111

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                        L+ LN + ++ EK    R  Q+     + +++               
Sbjct: 112 -------------LEILNAESELAEKQDMLRNTQISMEQDRLNNS--------------- 143

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
              +L+  + +   R   +++ +L +  L+S ++ L   ++                   
Sbjct: 144 -NEELSLSQDVITKRRSYQHQEALHKEELNSREEYLKAKED------------------- 183

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           Y   ++    I ++      +            + + +    +++N +       KL I 
Sbjct: 184 YDLAVKKHALISKRLKKDAQLRRSQM-------DQMGDNLEAMQKNVQLVRQRKEKLNI- 235

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
                     S I+G I            Q  Q +  I   S    ++A+V    I  VK
Sbjct: 236 ---------RSTISGEI-GLLDVELGQSIQAGQKIGVINDLSD-FKVQAQVDEHYIDRVK 284

Query: 344 KGYTAT 349
            G TAT
Sbjct: 285 PGLTAT 290


>gi|72384019|ref|YP_293373.1| secretion protein HlyD [Ralstonia eutropha JMP134]
 gi|72123362|gb|AAZ65516.1| Secretion protein HlyD [Ralstonia eutropha JMP134]
          Length = 450

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 99/300 (33%), Gaps = 34/300 (11%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + + Q++       +  +   N  +++   SL   + ++ ++Y N   L       +
Sbjct: 84  AVHADDTQIVKAGEPVVTLDAADANIALANAEASLGQTVRQVSALYANNNVLAATVQQRQ 143

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L+  + DL     + E  AV+                   E++   ++ ++      +
Sbjct: 144 ADLARARDDLRRRTEVTESGAVA------------------AEDVAHARDAVKTAEAALE 185

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A  + A+      +       +     +K+        + T+ +P+ G +   +S    
Sbjct: 186 TARQQLASNHTLTDQATVAEHPSVMAAAAKVREAYLADARNTLPAPVTGYVAR-RSVQVG 244

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  PLM IVP     ++ A     Q++H++ G    +    Y       +   +  
Sbjct: 245 QRVAPGNPLMAIVPLDG-VWVDANFKEVQLKHIRIGQPVELHADLYGSKVT--YHGKVVG 301

Query: 370 IDPIISQQDNNLQTQ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                    + L  Q          +   V +++  +   ++ +++  G   +V    + 
Sbjct: 302 FSAGTGSAFSALPAQNATGNWIKVVQRLPVRIQLDPVELREHPLQI--GLSMQVDVQTRE 359


>gi|150017767|ref|YP_001310021.1| secretion protein HlyD [Clostridium beijerinckii NCIMB 8052]
 gi|149904232|gb|ABR35065.1| secretion protein HlyD [Clostridium beijerinckii NCIMB 8052]
          Length = 217

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 9/145 (6%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +      +    + +   +   + +P  G I+  +      Y      L  ++   + 
Sbjct: 68  DVKDQILGRLDTNGLADANIDSALLRAPTNGIIIK-KETEEGQYVSAGSTLAVMI-DPEK 125

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNNLQTQ 384
            YI A +   +++ + +G +  ++         K FK  +E I            +    
Sbjct: 126 LYITANIEEIKVEKLHEGQSVDIKI---DQFEGKSFKGKVEYIGKASNSAFSLLPSSSGG 182

Query: 385 EYYEVILKIT-DLAFSDNNIELRNG 408
            + +V+ K+   + F  N+  L  G
Sbjct: 183 TFTKVVQKVPVKIEFEKNDANLLPG 207


>gi|330890473|gb|EGH23134.1| HlyD family secretion protein [Pseudomonas syringae pv. mori str.
           301020]
          Length = 388

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 4/188 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V+ G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVKEGQQVKAGELLATLDDRSIRASLEQARAQL 113

Query: 104 KNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +  +D  +  L     L     +  + F+ ++  +           + +    +   
Sbjct: 114 AQSKAQLDVAQLDLKRYRQLTQDNGISRQTFDQQQALVRQLEATAKGNEASINASQVQLS 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y  ++  +T    I         + S    L S  Q D   ++    +  +        E
Sbjct: 174 YTQIRSPVTGRVGIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAE 233

Query: 221 RIVYKSTL 228
           R       
Sbjct: 234 RSAATVKA 241



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 77/252 (30%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L ++       +   E +       +R ++ + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVKEG----QQVKAGELLATLDDRSIRASLEQARAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTQDNGISRQTFDQQQALVRQLEATAKGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P     + +   A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAERSAA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TV+              +  +  ID  +S     ++               F +   +L 
Sbjct: 238 TVKAYQGDGAANGLLLGEGTLSLIDNQVSATTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|307265728|ref|ZP_07547280.1| secretion protein HlyD family protein [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306919242|gb|EFN49464.1| secretion protein HlyD family protein [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 249

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 16/188 (8%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           ++ + K   R      + A L++           +  +    +  +   +     E+ TI
Sbjct: 71  DVSQYKEQARIAKANLEIAKLKYDQIKNGPKNQADIAKLNVDEAQANYDLANLMIEKGTI 130

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SPI G I      +    A     + +I       +++  +  K +  V      +++ 
Sbjct: 131 TSPIDGIITNIYINA-GEIAMAGGNIAQIS-DLSNLFVKIYIPEKYLYKVSLNQEVSIKV 188

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRN 407
               D      K  I  I         N  T+       Y+V +++ D        +L+ 
Sbjct: 189 DSIKDS----IKGKITYISSNGEFTPKNTVTKSSKEDVVYQVKVQVLDHVK-----DLKP 239

Query: 408 GFPAEVLF 415
           G  A+V+ 
Sbjct: 240 GMLADVII 247



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +G I      V ++S  SG I    V+ G +I +G  +   +  +  +   + K +++  
Sbjct: 32  TGTIEATT--VYVQSEVSGRITDLYVKEGEEIKKGDKIALIDVSQYKEQARIAKANLEIA 89

Query: 107 RCHIDTEKSA 116
           +   D  K+ 
Sbjct: 90  KLKYDQIKNG 99


>gi|269959567|ref|ZP_06173949.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835754|gb|EEZ89831.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 341

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 86/259 (33%), Gaps = 24/259 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +  +      + E+++ Q+++         S+ +   +     + ++ + +   
Sbjct: 50  RAKILSVAPQVQGQVISVEAKDFQVVNKGDLLLKIDSRPYLLAVKQAKAAYQLAVQQHDV 109

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 +        R+ L+  Q +     +L ++   S  DL+  +  +  +   L + 
Sbjct: 110 ADKQVTEAVAGLDAARSNLTEAQLEYKRTNSLVKRKLASDQDLDTAKNKLANAQASLEQA 169

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +  + +  E   EA +      +                   L   E       I 
Sbjct: 170 RATVEKAIANRGEEGAEAAVVQQAAAQ-------------------LAQAELNLSYTDIT 210

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP+ G      + +  +     Q L  ++      ++RA      + H+K G  A V   
Sbjct: 211 SPVDGIAGEINTHT-GSVVGIGQTLFPVI-VKGSYWVRANFKETDLTHIKAGMHAEVVID 268

Query: 354 HYADIREKKFKAIIEKIDP 372
            Y D+    + A +E++ P
Sbjct: 269 MYPDV---VWDAKVEELSP 284


>gi|237710769|ref|ZP_04541250.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229455491|gb|EEO61212.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 407

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 69/226 (30%), Gaps = 21/226 (9%)

Query: 204 NLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQ--KNMLRHINELYDEANLEFANYLK 260
           ++ +K   +++ D    +  +  +      N  E   +  L   N    E  L      +
Sbjct: 80  SVVKKGELIAEMDKVTLQSELQSAKATYDGNKAEYDYQKKLYDRNRKLHEKQLISDTDYE 139

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QP 317
           E   + ++ Q       + L   E+     TI SPI G +   +                
Sbjct: 140 ETVYNFQRAQSALEQSKAALAKAERNLSYATITSPIDGVVTS-RDVEEGQTVASGFETPT 198

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------D 371
           L  I        + A V    I  V++G   T     Y D     F+ ++ +I       
Sbjct: 199 LFTIAADLTKMQVVADVDEADIAGVEEGARVTFTVDAYPDD---VFEGVVRQIRLGSTNS 255

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
              S       T   YEV++        + +++L+    A      
Sbjct: 256 TSSSSSTTTSTTVVTYEVVITAD-----NPDLKLKPRLTANATIYT 296



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 51/142 (35%), Gaps = 1/142 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++++G I     V E+ +  SGII K  V+  S + +G  +   + +     +   K + 
Sbjct: 49  ITATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSVVKKGELIAEMDKVTLQSELQSAKATY 107

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +   D +K   D     ++    +    EE + +F     +          +    S
Sbjct: 108 DGNKAEYDYQKKLYDRNRKLHEKQLISDTDYEETVYNFQRAQSALEQSKAALAKAERNLS 167

Query: 164 LKMKLTRMRSIYLNRLDLENKS 185
                + +  +  +R   E ++
Sbjct: 168 YATITSPIDGVVTSRDVEEGQT 189


>gi|254490346|ref|ZP_05103535.1| efflux transporter, RND family, MFP subunit, putative [Methylophaga
           thiooxidans DMS010]
 gi|224464479|gb|EEF80739.1| efflux transporter, RND family, MFP subunit, putative [Methylophaga
           thiooxydans DMS010]
          Length = 552

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 85/284 (29%), Gaps = 50/284 (17%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLL-------RALLSSHQKDLTMMKNLFEKNAVSQND 215
           S   +   MR   + R D+      +       R  ++   + L  ++ LF +   S   
Sbjct: 132 SRIQQNIGMRIAPVTREDIATTIPAVGAVAWNEREQVNIQARALGYVEKLFVE--TSLER 189

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + + + ++     +      E   +     E            ++++     Q +R    
Sbjct: 190 VEKGQPLMAIYVPDWLAVQEEYLALKSMQGEKLGHLITASIARMRQVGMSEAQIRRVINT 249

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                    K + Q TI +PI G +                 LM+I       +  A+V 
Sbjct: 250 --------SKLQPQLTINAPINGVVTELVVR-EGMTISPGSTLMRINGLD-PVWANAEVP 299

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
             Q++ +  G +     P +     K F+  IE++ P +      ++             
Sbjct: 300 ENQVKKISAGDSVIATSPAFP---GKTFEGTIERLLPQVDPTTRTVR-----------AR 345

Query: 396 LAFSDNNIELRNGF-----------------PAEVLFTAKNTTL 422
           +  S+ + EL  G                  P E L      TL
Sbjct: 346 MVLSNPDGELLPGMFVDMQLAGKEISDALMVPTEALIRTGKRTL 389


>gi|34499853|ref|NP_904068.1| ABC export system, membrane fusion protein [Chromobacterium
           violaceum ATCC 12472]
 gi|34105703|gb|AAQ62057.1| ABC export system, membrane fusion protein [Chromobacterium
           violaceum ATCC 12472]
          Length = 404

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/319 (10%), Positives = 82/319 (25%), Gaps = 41/319 (12%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              ++  A      +       Y  T +      I S   +    + + ++   + +  +
Sbjct: 8   PALLVAVAALPFVARAFRQETVYQVTAAVAATREIRSSVLASCSLVYQDQAQLSSEVTGK 67

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
             + L+R           +   L ++   ++                 +      +    
Sbjct: 68  VSAVLVREGDHVRAGQPVL--RLDDEGYAAEVTQQAAAVRQQALQQRQQALTLANQQSAY 125

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQ-------RTFADEMSKLTILEKTREQKTILSP 295
              E    A +     L++    +++ +              + L    +   +  I +P
Sbjct: 126 RRKEALHRAGMVADAMLEDARYAVDEARVGLKNGGEQLRQSEAVLAQARQRAAKTVIRAP 185

Query: 296 IAGTIVYNQSFSSSNYAQQSQP------------LMKIVPHSKLTYIRAKVTPKQIQHVK 343
           ++G +            +  +             LM I  ++    + A +    I  V 
Sbjct: 186 MSGVVTSID-------IKPGETAIASQVGMVTPSLMTIA-NTGTMLVEANIDEADIGGVG 237

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKI--DP---IISQQDNNLQTQEYYEVILKITDLAF 398
            G  A V+   Y         A + +I   P     +           Y V L ++    
Sbjct: 238 SGQPAKVQLVAYPGA---PLSATVLQIPLSPKRMAGAPAGVPGGQARSYPVRLALSGSGR 294

Query: 399 SDNNIELRNGFPAEVLFTA 417
                 LR G    V    
Sbjct: 295 GL----LRPGMSCRVEIFT 309



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 47/142 (33%), Gaps = 4/142 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    I  SV +S  ++ +D    + S  +G +    V  G  +  G P+L  +D     
Sbjct: 37  AATREIRSSVLASCSLVYQDQAQ-LSSEVTGKVSAVLVREGDHVRAGQPVLRLDDEGYAA 95

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSK 151
            +  +  +++        +   L    + Y   + L +A    +  L D           
Sbjct: 96  EVTQQAAAVRQQALQQRQQALTLANQQSAYRRKEALHRAGMVADAMLEDARYAVDEARVG 155

Query: 152 VFNYGISSVYRSLKMKLTRMRS 173
           + N G         +   R R+
Sbjct: 156 LKNGGEQLRQSEAVLAQARQRA 177


>gi|50083613|ref|YP_045123.1| putative fusaric acid resistance protein FusE [Acinetobacter sp.
           ADP1]
 gi|49529589|emb|CAG67301.1| conserved hypothetical protein; putative fusaric acid resistance
           protein FusE [Acinetobacter sp. ADP1]
          Length = 338

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/150 (12%), Positives = 53/150 (35%), Gaps = 3/150 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++ S  SG++ +  V++   + +G  L   + +     ++  +  +   +  + 
Sbjct: 44  VRGDVIQVSSDVSGLVTEVLVQDNQTVKKGQVLFKIDVVRQQLDVEQARSDLAKAKAGLA 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ L          E      E+    +        SK     I +     + ++ +M
Sbjct: 104 QSQANLIAAKANLTKSEANTALAEKNAARYSSLLDGAISKQEQDQIYATRDQSRAEIAQM 163

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           ++        E      ++L+   Q +L +
Sbjct: 164 KAAIEQ---AEATIVQQKSLIEVAQSNLNL 190


>gi|307266550|ref|ZP_07548082.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306918404|gb|EFN48646.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 393

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 32/254 (12%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           + + L   DL  +  + +  L   Q  L  +K L EK +       Q         L   
Sbjct: 90  KLLELETQDLSIQYQIAQKQLEMAQMQLDALKKLKEKQSQQSQVAAQIPNTSLPQQLPSG 149

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E+  +Q +           + ++ ++   +    L+Q Q   A+   K       ++QK 
Sbjct: 150 ESTVQQPST----------SQIQTSSLSLDDQIKLQQKQVEIAELNLKNIKQNMYKQQKY 199

Query: 292 ILSPIAGTI-----VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           +++   GT+       N  F+SS +   +  +  +        I   V P    ++K+G 
Sbjct: 200 VIAEFDGTVTIVNAKDNSYFTSSQF--PAIAVEDL----NNLQIALDVNPYDAVNLKEGQ 253

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            A + F        K F+ ++ K+ P  ++           +V +        +N+  ++
Sbjct: 254 KAYIHFAD------KTFEGVVSKVSPTATKVITQTGGDNVVKVYVD-----LLNNDGTIK 302

Query: 407 NGFPAEVLFTAKNT 420
            GF  +V       
Sbjct: 303 PGFNVDVDIKIGEK 316



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 64/185 (34%), Gaps = 23/185 (12%)

Query: 20  MTLLSIIGIIGLITWS---------ILLPIEISVSSSGEIL--------NEDNVVE---I 59
           + +L I+ I+    ++           + +  +    G+I+         E    +   I
Sbjct: 9   LIVLVILAIVASTVYAISIKNKNSASTVEVNAAKVEKGDIVSLFSTTGVVESKSKQEYYI 68

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
            SP    + K  V  G  + +G  LL  E  + +    + +  ++  +  +D  K   + 
Sbjct: 69  LSPT--KVLKVYVSVGDNVKKGDKLLELETQDLSIQYQIAQKQLEMAQMQLDALKKLKEK 126

Query: 120 LNNKYDVLEK-AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            + +  V  +    S  +QL           +        S+   +K++  ++    LN 
Sbjct: 127 QSQQSQVAAQIPNTSLPQQLPSGESTVQQPSTSQIQTSSLSLDDQIKLQQKQVEIAELNL 186

Query: 179 LDLEN 183
            +++ 
Sbjct: 187 KNIKQ 191


>gi|238023135|ref|ZP_04603561.1| hypothetical protein GCWU000324_03059 [Kingella oralis ATCC 51147]
 gi|237865518|gb|EEP66658.1| hypothetical protein GCWU000324_03059 [Kingella oralis ATCC 51147]
          Length = 392

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 11/144 (7%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  +VS++GEI    N+V++ +  SG IKK  V+ G  + +G  +   +++   + ++
Sbjct: 42  GKIAQTVSATGEI-AATNLVDVGAQVSGQIKKMHVKIGDVVKEGDLIAEIDNVTQVNEVN 100

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYD----------VLEKAFESREEQLLDFLGKYHS 147
            +K  ++  +  +++ + AL     KY           V ++ FE+ E+ L     K   
Sbjct: 101 TRKAQLQTYQAQLESAQVALKIAQRKYSRYKSLASADAVSKEEFEATEDSLATNRAKIKE 160

Query: 148 TCSKVFNYGISSVYRSLKMKLTRM 171
             S +    I+       +  TR+
Sbjct: 161 LQSSIHQTQIAINTAEKDLGYTRI 184



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 94/294 (31%), Gaps = 28/294 (9%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            GK   T S       +++         +++ +++   D+  +  L+  + +  Q +   
Sbjct: 41  RGKIAQTVSATGEIAATNLVDVGAQVSGQIKKMHVKIGDVVKEGDLIAEIDNVTQVNEVN 100

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +        +Q    Q +    +  L++ +  + +   L   + +  E      + L  
Sbjct: 101 TRK-------AQLQTYQAQLESAQVALKIAQRKYSRYKSLASADAVSKEEFEATEDSLAT 153

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               +++ Q +       +   EK      I +P AGT+V             SQ    +
Sbjct: 154 NRAKIKELQSSIHQTQIAINTAEKDLGYTRITAPSAGTVVSL-VVEQGQTINSSQTSPTV 212

Query: 322 VPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----- 374
           V  +       + ++       VK G   TV F   ++       A ++ IDP +     
Sbjct: 213 VQIADLTSMTNKMQIAEGDATKVKAGQ--TVNFTILSEPDTP-ISAKLDSIDPGLTTMSQ 269

Query: 375 ---SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE--VLFTAKNTTLA 423
              S+  +      YY     + +       + +  G   +  V   + +  L 
Sbjct: 270 GSYSKSTDTTSNAIYYYARATVPNPE---GKLAI--GMTTQNTVEIASADNVLM 318


>gi|28868519|ref|NP_791138.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28851757|gb|AAO54833.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 388

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 52/140 (37%), Gaps = 5/140 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V  G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVREGQQVKAGELLATLDDRSIRASLEQTRAQL 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +D   + LD    +    +     +       L +  +  ++     I++    
Sbjct: 114 AQSKAQLDV--AQLDLKRYRQLTEDNGISRQTFDQQQALVRQLAATAQGNEASINAAQVQ 171

Query: 164 LKMKLTRMRSIYLNRLDLEN 183
           L    T++RS    R+ + N
Sbjct: 172 LS--YTQIRSPVTGRVGIRN 189



 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 40/127 (31%), Gaps = 17/127 (13%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L  +       +   E +       +R ++ + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVREG----QQVKAGELLATLDDRSIRASLEQTRAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q   T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTEDNGISRQTFDQQQALVRQLAATAQGNEASINAAQVQLSYTQIR 178

Query: 294 SPIAGTI 300
           SP+ G +
Sbjct: 179 SPVTGRV 185


>gi|294507744|ref|YP_003571802.1| ABC transporter permease [Salinibacter ruber M8]
 gi|294344072|emb|CBH24850.1| ABC transporter permease [Salinibacter ruber M8]
          Length = 457

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/231 (12%), Positives = 80/231 (34%), Gaps = 22/231 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++ +G  + +   V + +   G +++  +E G+ +  G P+L   + +            
Sbjct: 102 IAVTGTAVPK-QTVYLGAVEGGRVEEVYLEEGAMVEDGEPILRLSNSD------------ 148

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             LR  +   ++ L    ++   +    E R  +L   L +  +   +V         R 
Sbjct: 149 --LRLQLARTEARLAEQRSRMQQMRMDMEQRRLRLQQDLAQIRNELRRVER-QFERQKRL 205

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            +  L   +     R +L+ +   L    S++++D    ++  ++    +  L+++   +
Sbjct: 206 HEQDLIAEQEFQDTRDNLQYQRRRLELTRSAYRQDSLTYQSRLDQQREQRQRLDRRYETM 265

Query: 224 YKSTLEL------RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            ++   L         +      L  I           A    E+   +++
Sbjct: 266 QETVKSLTVRAPIDGQLTSLNAELGQIINPGTRVGQVDAVGRYELRAQIDE 316



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 84/200 (42%), Gaps = 14/200 (7%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           ++ N  +       + +L   RS +   R+D+E +   L+  L+  + +L  ++  FE+ 
Sbjct: 143 RLSNSDLRLQLARTEARLAEQRSRMQQMRMDMEQRRLRLQQDLAQIRNELRRVERQFER- 201

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              Q  L++Q+ I  +   + R+N+  Q+  L      Y + +L + +        L+Q 
Sbjct: 202 ---QKRLHEQDLIAEQEFQDTRDNLQYQRRRLELTRSAYRQDSLTYQSR-------LDQQ 251

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +        +   +++T +  T+ +PI G +    +            + + V       
Sbjct: 252 REQRQRLDRRYETMQETVKSLTVRAPIDGQLTSLNA-ELGQIINPGTRVGQ-VDAVGRYE 309

Query: 330 IRAKVTPKQIQHVKKGYTAT 349
           +RA++    I+ V+ G TAT
Sbjct: 310 LRAQIDEFYIERVRHGQTAT 329


>gi|86606280|ref|YP_475043.1| RND family efflux transporter MFP subunit [Synechococcus sp.
           JA-3-3Ab]
 gi|86554822|gb|ABC99780.1| efflux transporter, RND family, MFP subunit [Synechococcus sp.
           JA-3-3Ab]
          Length = 465

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 51/391 (13%), Positives = 115/391 (29%), Gaps = 95/391 (24%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           +  +   +  SG++     V  +    SG + +  V+ G +++ G  L   +  +    I
Sbjct: 74  VTDLAQRLRVSGQVQPIRQV-NVSPRESGRLAELLVDQGDEVVAGQVLARMDYGDLASGI 132

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              +  I+ L+  +   ++                  R + +     +  +  S+V    
Sbjct: 133 RQAQARIQELQARLAELQAG----------------ERPQVIAAAQARVDAARSQVRLA- 175

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                R L+   T ++   + R +L+ + + L    +  Q     ++ L           
Sbjct: 176 ----ERELERIQTLVQQGVVARSELDQRLARLEQAQADWQAAQQELERLR---------- 221

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
                                       +    E   +    + +   +L Q Q   A+ 
Sbjct: 222 ----------------------------SGSRPETLQQIQAQIAQAEAELAQRQSRLAEA 253

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLT 328
             +              +P +G +V  +     ++           +     I+  ++  
Sbjct: 254 EIR--------------APFSGVVVQ-RFAEVGSFVTPTTAASDATAASSSSILALAQGI 298

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +RA+V   QI  V+ G    +R   Y D      +  +++I P               E
Sbjct: 299 EVRAEVPEAQIAQVRVGQPVEIRSLAYPDR---VVQGRVKRIAPATVVVR---------E 346

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           V +    +        LR G    V F  + 
Sbjct: 347 VTVFRVMIEPEAGADFLRTGMNVSVDFIGER 377


>gi|154244413|ref|YP_001415371.1| secretion protein HlyD family protein [Xanthobacter autotrophicus
           Py2]
 gi|154158498|gb|ABS65714.1| secretion protein HlyD family protein [Xanthobacter autotrophicus
           Py2]
          Length = 324

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 55/366 (15%), Positives = 109/366 (29%), Gaps = 88/366 (24%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E ++V I    +G +    VE GS +  G  +   ED       D     +K     + 
Sbjct: 37  VEGDIVFIGPTEAGRVSALAVEEGSVVKSGDVVARVEDDLQVADRDAAAAQLKEAEARLA 96

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ L                 E  +LD      +                        
Sbjct: 97  DARAPLQR-------------PEEIAVLDAAEHRAAAA---------------------- 121

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
             +  +RLDL+ + +                  L  K A SQ +L+  +    ++   L 
Sbjct: 122 --LDQSRLDLDRQKA------------------LVPKGASSQANLDAAQHQFDQNQAALD 161

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E                       A  +   +  ++  ++  +   + L   +   +++T
Sbjct: 162 EAR-----------------KRIAAAGIAARTHAIDAAEQAVSAARATLAAAQVRLDRRT 204

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKKGYTAT 349
           + +P  G +             + +P++ I+P      ++ +  V  + + +V  G   T
Sbjct: 205 LKAPTNGPVQTVYYR-VGELVPEGRPVVSILPPG---LVKVRFFVPEQVLPNVALGSRVT 260

Query: 350 VRFPHYADIREKK--FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           V          K     A  E   P+I       +++  Y V  +  D A +      R 
Sbjct: 261 VTCDGCPSTTAKIFFISAQAEYTPPVIY--SREERSKLVYLVEARPDDPAKA------RP 312

Query: 408 GFPAEV 413
           G P  V
Sbjct: 313 GQPVNV 318


>gi|332992921|gb|AEF02976.1| putative cation efflux system protein [Alteromonas sp. SN2]
          Length = 610

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 65/183 (35%), Gaps = 19/183 (10%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L +  E Y  A       L E S+   +  +    E+  L    K ++  T  +P  G 
Sbjct: 160 ELVNAQEEYLIALKRSNKELIEASKTRLKALQMPESEIQSLISTGKVQQTITFYAPQTGF 219

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +          Y +    ++ I       ++ A+V  +Q   +++G   T+       + 
Sbjct: 220 VDNLNVR-QGFYVKPGLTILSIGALD-KVWVDAEVFERQSAQIQEGLPVTMTL---EYLP 274

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT--- 416
            K++   ++ I P + +    L      +V L+     F++++  L+    A+V      
Sbjct: 275 GKEWTGEVDYIYPTLDETTRTL------KVRLR-----FTNDDYALKPNMFAQVTIHSDL 323

Query: 417 AKN 419
              
Sbjct: 324 TGE 326


>gi|325280299|ref|YP_004252841.1| efflux transporter, RND family, MFP subunit [Odoribacter
           splanchnicus DSM 20712]
 gi|324312108|gb|ADY32661.1| efflux transporter, RND family, MFP subunit [Odoribacter
           splanchnicus DSM 20712]
          Length = 356

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 23/212 (10%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           AV +  L      V  + L+ +    E +  L           L+  +  +E    L   
Sbjct: 94  AVKKGQLL---LKVDDADLQAQLTRAEFQKKLLAEKLERQRILLKRESISREAFDQL--- 147

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q  +    + + +L+    +  I +P  G ++  +  S  +Y Q S  + +IV  +    
Sbjct: 148 QTDYNMLEADIELLKVKISRTEIRAPFDG-VMGFRYVSEGSYVQPSSQIARIV-DNSTLK 205

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
               +  K   +  KG     +         K + A +  +DP I  +            
Sbjct: 206 YEFNIPEKYADNNLKGQEVFFKVTGND----KLYSAKVYAVDPFIDVKT----------- 250

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            + +    F + N EL  G  A+        T
Sbjct: 251 RMILLRARFRNTNGELMPGMFAKGNLVVGGKT 282



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 10/117 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE----------K 114
           G ++K   + G  + +G  LL  +D +    +   +   K L   ++ +          +
Sbjct: 82  GKVRKIYFQEGVAVKKGQLLLKVDDADLQAQLTRAEFQKKLLAEKLERQRILLKRESISR 141

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            A D L   Y++LE   E  + ++     +        F Y     Y     ++ R+
Sbjct: 142 EAFDQLQTDYNMLEADIELLKVKISRTEIRAPFDGVMGFRYVSEGSYVQPSSQIARI 198


>gi|291281792|ref|YP_003498610.1| hypothetical protein G2583_1023 [Escherichia coli O55:H7 str.
           CB9615]
 gi|290761665|gb|ADD55626.1| UPF0194 membrane protein ybhG precursor [Escherichia coli O55:H7
           str. CB9615]
          Length = 332

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 127 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 185

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 186 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFS-VSLTRPVWV 243

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 244 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 300

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 301 VYRLRIVVTDADDA-----LRQGMPVTV 323



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 93/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 52  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 105 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 160 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 203

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F+  +++   +    +++ +     G  V  
Sbjct: 204 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFSVSLTRPVWVRAYVDERNLDQAQPGRKVLL 263

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 264 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 320

Query: 348 ATVRF 352
            TV+F
Sbjct: 321 VTVQF 325


>gi|160874666|ref|YP_001553982.1| secretion protein HlyD family protein [Shewanella baltica OS195]
 gi|160860188|gb|ABX48722.1| secretion protein HlyD family protein [Shewanella baltica OS195]
 gi|315266906|gb|ADT93759.1| secretion protein HlyD family protein [Shewanella baltica OS678]
          Length = 372

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 61/179 (34%), Gaps = 3/179 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E + + + +P   +I +  V  G Q+  G  LLT +       + L++  ++  +  +
Sbjct: 86  TVERDRLTLTAPVGELITQVNVVEGQQVKAGEVLLTLDSTSANARLALRQAELEQAKAKL 145

Query: 111 --DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF-NYGISSVYRSLKMK 167
                 + L+ +     VL+ A  S +E    F        +KV     + +   +    
Sbjct: 146 SEAVTGARLEDIERAKAVLDGAKASVKEAQRAFERTNRLYATKVLSQADLDTARAARDTS 205

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           L +      +   LEN +   +   +             E+ A++   L      V  +
Sbjct: 206 LAKQAEAEQSLRLLENGTRSEQLEQAKAAVAAASASVAIEQKALADLSLVAARDAVVDT 264



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 51/344 (14%), Positives = 97/344 (28%), Gaps = 42/344 (12%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           ++ G  LL            L  V    L     T  + +  L  + +V+E       E 
Sbjct: 64  VVLGCLLLQLAACTQESPSVLGTVERDRL-----TLTAPVGELITQVNVVEGQQVKAGEV 118

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL       +    +    +      L   +T  R   + R   +      +A +   Q+
Sbjct: 119 LLTLDSTSANARLALRQAELEQAKAKLSEAVTGARLEDIERA--KAVLDGAKASVKEAQR 176

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                  L+    +SQ DL+        S  +  E     + +                 
Sbjct: 177 AFERTNRLYATKVLSQADLDTARAARDTSLAKQAEAEQSLRLLENGTR------------ 224

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                S  LEQ +   A   + + I +K     ++++     +         +       
Sbjct: 225 -----SEQLEQAKAAVAAASASVAIEQKALADLSLVAARDAVVDTLPWR-VGDRIAAGTQ 278

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------D 371
           L+ ++      Y+R  +    +  VK G    +R       RE      +  I       
Sbjct: 279 LIGLLASEDP-YVRVYLPATWLDRVKAGDKVNIRVDG----REMPIAGTVRNIRSQPAYT 333

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           P  +  + +     Y      +TD+  S    +L  G    V  
Sbjct: 334 PFYALNERDRARLMY------LTDITISAAGQDLPTGMALAVEL 371


>gi|315285090|gb|EFU44535.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           110-3]
          Length = 385

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 34/278 (12%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK-NAVSQ-NDLNQQERIVYK 225
           L   R   + R+++  + S     L   Q D      L  + + + Q NDL   E  + +
Sbjct: 52  LATGRIDAIERVNVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQCNDLRNAEAALNE 111

Query: 226 STLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              EL+      K               N       +     L   +       +KL   
Sbjct: 112 VKAELQSKQALLKQAELRFKRQLRMLRENASSHEDFESAEAMLATTRAELHSLNAKLVQA 171

Query: 284 EKT-------REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKV 334
           +          E   +++P+ G ++             +Q    I+  +   +  I+A++
Sbjct: 172 QIEVDKKKLALEYTRVVAPMDGIVIAI-VTQQGQTVNSNQSAPTIIKLARLDVMTIKAQI 230

Query: 335 TPKQIQHVKKGYTATVRFPHYA------DIREKKFKAIIEKIDPIISQQDNNLQTQE--- 385
           +   I  +  G  A  RF  ++          +  +   E +    S   N   +     
Sbjct: 231 SEADITRISVGQKA--RFSIFSEPDKHYSATLRAVELAPESVMKDDSLASNTSASGSGTS 288

Query: 386 ----YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               YY  +  + +     N + +     A+V      
Sbjct: 289 NASVYYNALFDVPNPE---NRLRIA--MTAQVTLITDE 321



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 63/142 (44%), Gaps = 11/142 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G I   + V  + +  SG +K  +V+ G  + +G  +   +D+   + +   
Sbjct: 47  IENSVLATGRIDAIERV-NVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQCNDLRNA 105

Query: 100 KVSIKNLRCHIDTEKSAL--DFLNNKYDVL--------EKAFESREEQLLDFLGKYHSTC 149
           + ++  ++  + ++++ L    L  K  +          + FES E  L     + HS  
Sbjct: 106 EAALNEVKAELQSKQALLKQAELRFKRQLRMLRENASSHEDFESAEAMLATTRAELHSLN 165

Query: 150 SKVFNYGISSVYRSLKMKLTRM 171
           +K+    I    + L ++ TR+
Sbjct: 166 AKLVQAQIEVDKKKLALEYTRV 187


>gi|258622927|ref|ZP_05717943.1| Membrane-fusion protein [Vibrio mimicus VM573]
 gi|258584866|gb|EEW09599.1| Membrane-fusion protein [Vibrio mimicus VM573]
          Length = 381

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 72/191 (37%), Gaps = 12/191 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +   
Sbjct: 47  VEKQAVAVGQIMPS-HAVAIKSQINGIVGEIYVREGQLVEQGQPLIKVRPNPTPQALTDA 105

Query: 100 KVSIKNLRCHIDTEKSALDFL----------NNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              +     +++++   L  L           N  D +    E + ++      + +   
Sbjct: 106 STELMQSEANLESDLQRLANLEHLVKQKIIPENYDDYVRAKAEVKAKKAEVQQKRQNLEL 165

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +     I     S  +      +I   ++++ E   S   +  ++    L  MKN+  K
Sbjct: 166 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMMQLADMKNIVFK 225

Query: 209 NAVSQNDLNQQ 219
            +VS++D  Q 
Sbjct: 226 GSVSEHDAAQL 236



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 101/262 (38%), Gaps = 34/262 (12%)

Query: 183 NKSSLLRALLSSHQKDLTMMK-NLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           + +  +++ ++    ++ + +  L E+   + +   N   + +  ++ EL ++    ++ 
Sbjct: 60  SHAVAIKSQINGIVGEIYVREGQLVEQGQPLIKVRPNPTPQALTDASTELMQSEANLESD 119

Query: 241 LRHINELYDEANLEFA-----------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+ +  L      +               +K    +++Q ++      S    + + +  
Sbjct: 120 LQRLANLEHLVKQKIIPENYDDYVRAKAEVKAKKAEVQQKRQNLELIRSGEASIGQAKLS 179

Query: 290 KTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            T+ +PI+GTI+  +              Q +  +M++    K    +  V+      + 
Sbjct: 180 STLYAPISGTILNIKV-EVGEPIISTESSQAATEMMQLA-DMKNIVFKGSVSEHDAAQLI 237

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL---QTQEY---YEVILKITDLA 397
            G  A +    Y    E+  +  + K+  I S++ NN    + + +   +EV +    + 
Sbjct: 238 SGMPAIITVAPYP---EQAIEGQLTKV-AIQSERLNNPENKEGKSFDNGFEVEIGQLQI- 292

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
              ++I LR+GF A    T + 
Sbjct: 293 --PDSITLRSGFSASAQITLQR 312


>gi|256086965|ref|XP_002579652.1| myosin heavy chain [Schistosoma mansoni]
 gi|238665120|emb|CAZ35891.1| myosin heavy chain [Schistosoma mansoni]
          Length = 1839

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 78/221 (35%), Gaps = 6/221 (2%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  E           + +   L+  ++     ++  N     LE+   +    L ++  K
Sbjct: 1279 LESEAESAKSKCGQLEKTKARLQGELEDLMVDVERANGLASQLERKQNNFNRTLAEWQKK 1338

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            Y  + +++ N    +  +S     T +  +     ++  +   LR    +   ++  +  
Sbjct: 1339 YADSQAELENAQRDARGQS-----TEIFRLKAQLEEVHEQMEGLRRENKNLSDEIHDLTE 1393

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
               +   S +++++  R +     EL+  + E ++ L         A LE +   +EI R
Sbjct: 1394 QLGEGGRSVHEIDKNRRRLEMEKEELQAALEEAESALEQEEAKVQRAQLEMSQIRQEIDR 1453

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
             L + +  F +   K        +Q ++ +   G     + 
Sbjct: 1454 RLAEKEEEF-EATRKNHQRAMESQQASLEAEAKGKAEAMRV 1493



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 74/219 (33%), Gaps = 22/219 (10%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL---------LDFL 142
                   +   I  L+  ++     ++ L  +   L        EQL         +D  
Sbjct: 1349 AQRDARGQSTEIFRLKAQLEEVHEQMEGLRRENKNLSDEIHDLTEQLGEGGRSVHEIDKN 1408

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +      +     +     +L+ +  +++   L    +  +   +   L+  +++    
Sbjct: 1409 RRRLEMEKEELQAALEEAESALEQEEAKVQRAQLEMSQIRQE---IDRRLAEKEEEFEAT 1465

Query: 203  KNLFEKNAVSQNDLNQQER----IVYKSTLELRENIHEQKNMLRHINELYDEANL---EF 255
            +   ++   SQ    + E        +   +L ++I+E +  L   N    E      +F
Sbjct: 1466 RKNHQRAMESQQASLEAEAKGKAEAMRVKKKLEQDINELEVSLDGANRARAEQEKNVKKF 1525

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               ++E+   LE +QR   D   +    E+   + T+L+
Sbjct: 1526 QQQVRELQSQLEDDQRQRDDLREQFQAAER---RATVLA 1561



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 78/212 (36%), Gaps = 10/212 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ED +       ++      R  +      LD L    D  E++ +  E +  +   + 
Sbjct: 1535 QLEDDQRQRDDLREQFQAAERRATVLA--GELDELRIALDQAERSRKIAEAERAEASDRA 1592

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                ++     +++  R L+  L  M      + DLE  ++  +      +K +     +
Sbjct: 1593 TEMSTQT--ASLAAQKRKLEADLAAM------QADLEEAANEAKQADERAKKAMADSARV 1644

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            FE+    Q      E+   +  ++++E +   ++      +   +A  +    ++E+  +
Sbjct: 1645 FEEIRQEQEHTQHVEKARKQLEIQVKELMARLEDSESGAMKNGRKAMGKLEQRVRELETE 1704

Query: 266  LEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            LE  QR   +    L  +++  ++ ++ +   
Sbjct: 1705 LEAEQRRHGETQKNLRKVDRRMKEISLQAEED 1736



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 66/202 (32%), Gaps = 16/202 (7%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            +  + +++     ++ E++ +     +   + +  + R  +  +          +     
Sbjct: 1417 EELQAALEEAESALEQEEAKVQRAQLEMSQIRQEIDRRLAEKEEEFEATRKNHQRAMESQ 1476

Query: 157  ISSVYRSLKMKLTRMR----------SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             +S+    K K   MR           + ++        +     +   Q+ +  +++  
Sbjct: 1477 QASLEAEAKGKAEAMRVKKKLEQDINELEVSLDGANRARAEQEKNVKKFQQQVRELQSQL 1536

Query: 207  EKNAVSQNDLNQQ----ERIVYKSTLELRENI--HEQKNMLRHINELYDEANLEFANYLK 260
            E +   ++DL +Q    ER       EL E     +Q    R I E       + A  + 
Sbjct: 1537 EDDQRQRDDLREQFQAAERRATVLAGELDELRIALDQAERSRKIAEAERAEASDRATEMS 1596

Query: 261  EISRDLEQNQRTFADEMSKLTI 282
              +  L   +R    +++ +  
Sbjct: 1597 TQTASLAAQKRKLEADLAAMQA 1618



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 66/193 (34%), Gaps = 8/193 (4%)

Query: 100  KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            + ++K L   +      LD      +          +++ +   +     S++    ++ 
Sbjct: 1125 EKTVKALESQLQEVSVKLDEATRNLNEQASTKARSSQEVSELQRQLEEAESQL--SQLNK 1182

Query: 160  VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            + + L  +L   R    +   ++ K   L   + +   DL  ++   E+   ++ DL   
Sbjct: 1183 IKQQLSAQLEEARHSLEDESRMKAK---LNGEVRNLTSDLDSLRETLEEEQSAKGDL--- 1236

Query: 220  ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            +R + K   EL++            +E  +E   +    ++E+  + E  +         
Sbjct: 1237 QRQLQKLQGELQQLRSRGGGGGDVRSEEVEELKRKMNAKIQELESEAESAKSKCGQLEKT 1296

Query: 280  LTILEKTREQKTI 292
               L+   E   +
Sbjct: 1297 KARLQGELEDLMV 1309



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 26/219 (11%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             D+      +L K+        +  E++       + D +         +L D L + + 
Sbjct: 1040 SDLTKKREAELMKLKRDLEDTRLQNEQAIATMRKKQSDAI--------NELADQLDQANK 1091

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLF 206
              +K      S     L     ++ SI   +L+ E     L + L      L    +NL 
Sbjct: 1092 AKAKAEKER-SQFKAELDDAHNQVDSIMKAKLNSEKTVKALESQLQEVSVKLDEATRNLN 1150

Query: 207  EK---NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE--------- 254
            E+    A S  ++++ +R + ++  +L +    ++ +   + E       E         
Sbjct: 1151 EQASTKARSSQEVSELQRQLEEAESQLSQLNKIKQQLSAQLEEARHSLEDESRMKAKLNG 1210

Query: 255  ----FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                  + L  +   LE+ Q    D   +L  L+   +Q
Sbjct: 1211 EVRNLTSDLDSLRETLEEEQSAKGDLQRQLQKLQGELQQ 1249



 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 70/203 (34%), Gaps = 10/203 (4%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +  I+  K  +++L   +   +      +N+   L+     +     D +    +   K 
Sbjct: 823  SAEIEELKKDVEDLESSLQKAEQEKQTKDNQIRTLQSEMAQQ-----DEMIGKLNKDKKN 877

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM----KNLFEK 208
                      +L+ +  ++  +   +  LE+    +   L+  QK    +    + L   
Sbjct: 878  LEEQNKRTQEALQAEEDKVNHLNKLKAKLESTLDEMEENLAREQKIRGDVEKSKRKLEGD 937

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
               +Q  ++  ER+      +LR    E   +     E       +    +KE+   +++
Sbjct: 938  LKATQETVDDLERVKRDLEEQLRRKEAEIGGLSGKF-EDEQGLVAQLQRKIKELQTRIQE 996

Query: 269  NQRTFADEMSKLTILEKTREQKT 291
             +     E +  +  EK+R+Q  
Sbjct: 997  LEEDLEAERAARSKAEKSRQQLE 1019



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 64/199 (32%), Gaps = 19/199 (9%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             +   K  +  +  E+  ++ LN     LE   +  EE L                    
Sbjct: 878  LEEQNKRTQEALQAEEDKVNHLNKLKAKLESTLDEMEENLAREQKIR------------G 925

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE--KNAVSQNDL 216
             V +S +     +++      DLE     L   L   + ++  +   FE  +  V+Q  L
Sbjct: 926  DVEKSKRKLEGDLKATQETVDDLERVKRDLEEQLRRKEAEIGGLSGKFEDEQGLVAQ--L 983

Query: 217  NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD--LEQNQRTFA 274
             ++ + +     EL E++  ++       +   +   E    +  +         Q    
Sbjct: 984  QRKIKELQTRIQELEEDLEAERAARSKAEKSRQQLESELEEVVDRLEEQDGATAAQSDLT 1043

Query: 275  DEMS-KLTILEKTREQKTI 292
             +   +L  L++  E   +
Sbjct: 1044 KKREAELMKLKRDLEDTRL 1062


>gi|170698973|ref|ZP_02890032.1| secretion protein HlyD family protein [Burkholderia ambifaria
           IOP40-10]
 gi|170136153|gb|EDT04422.1| secretion protein HlyD family protein [Burkholderia ambifaria
           IOP40-10]
          Length = 349

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/367 (11%), Positives = 103/367 (28%), Gaps = 81/367 (22%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P+   R+  L+I+ + G+   +       +  S+ +   + ++V + SP  G I +  V 
Sbjct: 9   PSMKGRVIALAIVAL-GIAALAYAYHRTSAYPSTDDASIDADLVHVASPVGGRIVRLAVH 67

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++ +G  L   + +            +   +   D E +                  
Sbjct: 68  ENQRVAKGDLLYEIDPVPYR---------LTVAQAQADVELARA---------------- 102

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                                        SL  +   +   + N      +         
Sbjct: 103 -----------------------------SLDTRRRSLIGEHSNAAVAAEQVKRATQNYD 133

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              +D+  +  L  +  VS    +Q +     + + L +   +Q++  + I         
Sbjct: 134 LATRDVNRLAPLAAQGYVSAQQFDQAKVRQRDAAVSLAQAKEQQRSSAQTIG-------- 185

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                      D      T     + L   +   +   + +P  G +      +      
Sbjct: 186 -----------DDADAIATLHAREAALARAQHALDDTVVRAPHDGLVTGLTVLA-GETLA 233

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDP 372
            +Q +  ++  S+   +        +  +  G  ATV    Y+ I R +     +  I  
Sbjct: 234 PNQSIFTLIDASEWFAV-GNFRETSLNRIAVGDCATV----YSMIDRSRPLAGKVVGIGA 288

Query: 373 IISQQDN 379
            I+  D 
Sbjct: 289 GIADSDR 295


>gi|110680648|ref|YP_683655.1| multidrug resistance efflux pump, putative [Roseobacter
           denitrificans OCh 114]
 gi|109456764|gb|ABG32969.1| multidrug resistance efflux pump, putative [Roseobacter
           denitrificans OCh 114]
          Length = 411

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 54/182 (29%), Gaps = 6/182 (3%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            ++  +++    V I     G + +  V+N   +  G P+   ED      ++  K  I 
Sbjct: 63  PATNSVVSYFRTVTILPQAGGRVLEIYVKNNELVNLGQPIFRLEDHSQRAQVEAAKAMIA 122

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                +   ++ L            A +  EE+L   +       + V    I      +
Sbjct: 123 QADASLKVAQTDLTEATAAIAGATAALKQAEEELERNVTLRDQGSTAVRLTEIDRFENLV 182

Query: 165 KMKLTRMRSIYLNRLDLENKSSLL------RALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
             +  +  +      + + +   L       AL      +  + K +       + +   
Sbjct: 183 AQRSAQRDAAIAQLAETQERIDSLIPAQKANALAQFDAANAELEKTVVYAGVTGRVEQLS 242

Query: 219 QE 220
            +
Sbjct: 243 LQ 244


>gi|330988083|gb|EGH86186.1| HlyD family secretion protein [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 388

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 4/188 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V+ G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVKEGQQVKAGELLATLDDRSIRASLEQARAQL 113

Query: 104 KNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +  +D  +  L     L     +  + F+ ++  +           + +    +   
Sbjct: 114 AQSKAQLDVAQLDLKRYRQLTQDNGISRQTFDQQQALVRQLEATAKGNEASINASQVQLS 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y  ++  +T    I         + S    L S  Q D   ++    +  +        E
Sbjct: 174 YTQIRSPVTGRVGIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAE 233

Query: 221 RIVYKSTL 228
           R       
Sbjct: 234 RSAATVKA 241



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 77/252 (30%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L ++       +   E +       +R ++ + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVKEG----QQVKAGELLATLDDRSIRASLEQARAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTQDNGISRQTFDQQQALVRQLEATAKGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P     + +   A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAERSAA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TV+              +  +  ID  +S     ++               F +   +L 
Sbjct: 238 TVKAYQGDGAANGLLLGEGTLSLIDNQVSATTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|319902514|ref|YP_004162242.1| efflux transporter, RND family, MFP subunit [Bacteroides helcogenes
           P 36-108]
 gi|319417545|gb|ADV44656.1| efflux transporter, RND family, MFP subunit [Bacteroides helcogenes
           P 36-108]
          Length = 410

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 71/223 (31%), Gaps = 20/223 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQ--KNMLRHINELYDEANLEFANYLKEISRDL 266
             +++ D    +  +            E   +  L   N++     L      ++     
Sbjct: 86  QLIAEMDRVTLQSELASQRASYNGAKAEYEYQQKLYERNKILHAKQLIATTDYEQSLYSY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ + TF    + L   E+     TI SPI G +   +S  +            L  I  
Sbjct: 146 QKAKSTFESTQAALAKAERNLSYATITSPIDGVVTS-RSVEAGQTVASGYSTPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------DPIISQQ 377
                 +   V    I  +K+G   +     Y +     F+ I+ +I          S  
Sbjct: 205 DLTQMQVVTDVDEADIADIKEGQRTSFTVDAYPNDT---FEGIVTQIRLGQASSSSSSSS 261

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            ++  T   YEV++     +  + +++L+    A V     + 
Sbjct: 262 SSSSTTVVTYEVVI-----SAHNPDLKLKPRLTANVTIYTLDR 299



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 68/188 (36%), Gaps = 4/188 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  SV+++G I     V  + +  SGII K  V+  S + +G  +   + +     + 
Sbjct: 43  GEISESVTATGTIEPVTEV-TVGTQVSGIIDKIYVDYNSVVTKGQLIAEMDRVTLQSELA 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK---YHSTCSKVFN 154
            ++ S    +   + ++   +     +     A    E+ L  +      + ST + +  
Sbjct: 102 SQRASYNGAKAEYEYQQKLYERNKILHAKQLIATTDYEQSLYSYQKAKSTFESTQAALAK 161

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              +  Y ++   +  + +           S      L +   DLT M+ + + +     
Sbjct: 162 AERNLSYATITSPIDGVVTSRSVEAGQTVASGYSTPTLFTIAADLTQMQVVTDVDEADIA 221

Query: 215 DLNQQERI 222
           D+ + +R 
Sbjct: 222 DIKEGQRT 229


>gi|90577527|ref|ZP_01233338.1| putative multidrug resistance protein [Vibrio angustum S14]
 gi|90440613|gb|EAS65793.1| putative multidrug resistance protein [Vibrio angustum S14]
          Length = 382

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 89/281 (31%), Gaps = 22/281 (7%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSL--LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
               +  ++ S+  N L L+ + +   L+  +   Q     +  L    A  +  L Q +
Sbjct: 72  QQVKQGEQLVSLNHNPLLLKQQQAEANLKNTVRDIQSKYLQIAQLKANVAAEKVMLAQAK 131

Query: 221 RIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR-----TFA 274
           +   +    +   ++  +       N L  E NL   N   +  + L   +         
Sbjct: 132 QDYKRRIGGDKDGSVLAEVVSHSKNNVLIKEQNLIALNKQLQALQTLLPQENILDNPQVQ 191

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
             +++L  +   ++  TI +P AG +V           Q  QPLM IVP     ++ A  
Sbjct: 192 MAITQLRHVYLDQQNATIFAPKAGMVVNRSVQIG-QQIQAGQPLMTIVPLDN-VWVEANF 249

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ---------- 384
              Q+ ++  G   T++   Y D     +  ++  I          +  Q          
Sbjct: 250 KETQLHNIHTGQPVTIKSDLYGDKYT--YHGVVAGIGAGTGSAFAAIPAQNATGNWIKIV 307

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           +   V + I       + + +       V   A        
Sbjct: 308 QRVPVRIYIDSQQIEQHPLRIGMSMTVTVDTKATANKPFNY 348



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 56/161 (34%), Gaps = 17/161 (10%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI--------------ETTDLID 97
                + I +  SG +    V++  Q+ QG  L++                   T   I 
Sbjct: 48  VAGQRIMITAQESGTVNAINVDDTQQVKQGEQLVSLNHNPLLLKQQQAEANLKNTVRDIQ 107

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            K + I  L+ ++  EK  L     K D   +    ++  +L  +  +      +    +
Sbjct: 108 SKYLQIAQLKANVAAEKVMLA--QAKQDYKRRIGGDKDGSVLAEVVSHSKNNVLIKEQNL 165

Query: 158 SSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRALLSSHQK 197
            ++ + L+   T + +   L+   ++   + LR +    Q 
Sbjct: 166 IALNKQLQALQTLLPQENILDNPQVQMAITQLRHVYLDQQN 206


>gi|71908097|ref|YP_285684.1| secretion protein HlyD [Dechloromonas aromatica RCB]
 gi|71847718|gb|AAZ47214.1| Secretion protein HlyD [Dechloromonas aromatica RCB]
          Length = 504

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 71/190 (37%), Gaps = 20/190 (10%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE---K 285
           EL     E     + +N+L +EA  E  + +K+++    Q  + +     ++  L     
Sbjct: 165 ELVSAQREYVIAAQGVNKL-NEAGGEAQSAMKQLADSSLQRLKNWDISDEQIKALAHSGN 223

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
            +   T  +P+AG +   ++          + L +I   +   +++A V  + I  V  G
Sbjct: 224 AKRTLTFRAPVAGIVTEKKAV-QGMRFMPGEALYQIA-DTSSVWVQADVFEQDIAAVGVG 281

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
             A +R   Y     + F+  I  + P +  +           V ++I     ++    L
Sbjct: 282 QKAKIRINAYP---GEVFEGRIAYVYPTLKAETRT--------VPVRI---ELANPKGRL 327

Query: 406 RNGFPAEVLF 415
           +    AEV  
Sbjct: 328 KPAMYAEVEI 337


>gi|253999658|ref|YP_003051721.1| RND family efflux transporter MFP subunit [Methylovorus sp. SIP3-4]
 gi|253986337|gb|ACT51194.1| efflux transporter, RND family, MFP subunit [Methylovorus sp.
           SIP3-4]
          Length = 361

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 67/197 (34%), Gaps = 22/197 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + DL Q+E    ++   LR+   +   +         E   +   YL        + +  
Sbjct: 103 KADLAQKEADALEAEANLRQAELDANRVKGLAKGALSE--QQVVQYLTTEQTAKAKFESA 160

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A   S+         +  I++P  GTI  +++ +  +     + L ++V        R 
Sbjct: 161 VAALESQ----RLRLRRTRIVAPEFGTI-SSRTATVGSVVNAGEELFRLV-MQDRLEWRG 214

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +V   ++  VK G   T+         + +    +  I P ++Q   N        V + 
Sbjct: 215 EVGATELASVKPGQAVTLT----PTGSQAQVTGKVRVIAPTMNQDTRNT------LVYVD 264

Query: 393 ITDLAFSDNNIELRNGF 409
           I        +  L++G 
Sbjct: 265 IPQ----GVDGPLKSGM 277



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 70/153 (45%), Gaps = 9/153 (5%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +K   V  G+++ +G  L  F+D       DL +     L    +  ++ LD   N+  
Sbjct: 76  RLKAVYVNVGNKVKKGQLLAEFDDETVKA--DLAQKEADALEAEANLRQAELD--ANRVK 131

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            L K   S E+Q++ +L    +  +K F   ++++  S +++L R R +      + +++
Sbjct: 132 GLAKGALS-EQQVVQYLTTEQTAKAK-FESAVAAL-ESQRLRLRRTRIVAPEFGTISSRT 188

Query: 186 SLLRALLSSHQK--DLTMMKNLFEKNAVSQNDL 216
           + + +++++ ++   L M   L  +  V   +L
Sbjct: 189 ATVGSVVNAGEELFRLVMQDRLEWRGEVGATEL 221


>gi|14195008|sp|Q9JI55|PLEC_CRIGR RecName: Full=Plectin; Short=PCN; Short=PLTN; AltName: Full=300 kDa
            intermediate filament-associated protein; AltName:
            Full=IFAP300; AltName: Full=Plectin-1
 gi|7839650|gb|AAF70372.1| plectin [Cricetulus griseus]
          Length = 4473

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 61/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1269 RMEEEERLAEQQRAEERERLAEGEAALEKQRQLAEAHAQAKAQAELEAQELQRRMQEEVA 1328

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     +++  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1329 RREEAAVNAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1381

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1382 VVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1440

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1441 AELALRVKAQAEAAQEKQR 1459



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 72/226 (31%), Gaps = 11/226 (4%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2109 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2162

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2163 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2222

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++DL   + L EK    +    Q+   +      L++     +   R + E  ++   +
Sbjct: 2223 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQ 2282

Query: 255  FANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2283 LVEETQGFQRTLEVERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2328



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 65/194 (33%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T  +V       +
Sbjct: 2246 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTL-EVERQRQLEM 2304

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                +    RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2305 SAEAERLKLRMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2363

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2364 RQQSDHDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2423

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2424 EKDSLLQRERFIEQ 2437



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2158 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2217

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2218 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2277

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2278 QMAQQLVEETQGFQRTLEVERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2337

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2338 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2368



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 59/182 (32%), Gaps = 14/182 (7%)

Query: 110  IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            + T  S L  L ++Y         R E+      +  +   +    G +++ +    +L 
Sbjct: 1245 LRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEGEAALEKQR--QLA 1302

Query: 170  RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
               +    + +LE +    R      +++   +               QQ+R + +    
Sbjct: 1303 EAHAQAKAQAELEAQELQRRMQEEVARREEAAVNA------------QQQKRSIQEELQH 1350

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            LR++   +        E  + + +     ++ +   LE  +R       +L  L    E+
Sbjct: 1351 LRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEE 1410

Query: 290  KT 291
              
Sbjct: 1411 AE 1412



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 71/212 (33%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1382 VVRLQLETTERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1435

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1436 KRQAEAE--LALRVKAQAEAAQEKQRALQALEELRLQAEEAERRLRQAQAERARQVQVAL 1493

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
               +++A  + +L  +     + T +L   + E+   +  + E  +    + A   +   
Sbjct: 1494 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREKAERRAQQQAEAERARE 1551

Query: 264  RDLEQN---QRTFADEMSKLTILEKTREQKTI 292
                +    Q    + +      E+  +Q+++
Sbjct: 1552 EAERELERWQLKANEALRLRLQAEEVAQQRSL 1583



 Score = 40.0 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 57/206 (27%), Gaps = 5/206 (2%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              L  L+++ ++         ++  +        LE A  S E +L      +    +++
Sbjct: 1459 RALQALEELRLQAEEAERRLRQAQAERARQVQVALETAQRSAEVELQSKRASFAEKTAQL 1518

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                        +++    R           +    R L     K    ++   +   V+
Sbjct: 1519 ERTLQEEHVTVTQLREKAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVA 1578

Query: 213  QNDLNQQ-----ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            Q     Q     ++   +     R    EQ    R + E   E   + A    +     E
Sbjct: 1579 QQRSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAE 1638

Query: 268  QNQRTFADEMSKLTILEKTREQKTIL 293
            Q       E  +     +  E++   
Sbjct: 1639 QELIRLRAETEQGEQQRQLLEEELAR 1664



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 62/196 (31%), Gaps = 22/196 (11%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + + LR  +  E+ A      + D  ++  E+  E       +  +   +       
Sbjct: 1561 QLKANEALRLRLQAEEVAQQRSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1620

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               R L     + R        L  +  L+R  L +  +     + L E+      +L +
Sbjct: 1621 EKQRQLAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEE------ELAR 1664

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
             +R    +T + +E   E   +   + E+   +        +  S   +Q     AD   
Sbjct: 1665 LQREATAATHKRQELEAELAKVRAEM-EVLLASKARAEEESRSTSEKSKQRLEAEADRFR 1723

Query: 279  KLTILEKTREQKTILS 294
            +L       E   + +
Sbjct: 1724 ELAE-----EAARLRA 1734



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 22/239 (9%), Positives = 64/239 (26%), Gaps = 36/239 (15%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTE------KSALDFLNNKYDVLEKAFESREEQ 137
            L              ++   +  R     +      + A   L  +     +A + ++  
Sbjct: 1401 LQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALRVKAQAEAAQEKQRA 1460

Query: 138  LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL----RALLS 193
            L                   +   R+ ++++    +     ++L++K +        L  
Sbjct: 1461 LQALEELRLQAEEAERRLRQAQAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLER 1520

Query: 194  SHQKDLTMMKNLFEKNA--------------------------VSQNDLNQQERIVYKST 227
            + Q++   +  L EK                             ++    + +       
Sbjct: 1521 TLQEEHVTVTQLREKAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQ 1580

Query: 228  LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L +   E++               E A   +E++    + QR  A+  ++  +  + 
Sbjct: 1581 RSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQ 1639



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 66/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1762 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAALHKADIEERL 1821

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL-------------ENKSSLLRALLSSHQ 196
            +++     S + R   +    +R       ++             + +  L    + S  
Sbjct: 1822 AQLRKASESELERQKGLVEDTLRQRRQVEEEILALKVSFEKAAAGKAELELELGRIRSSA 1881

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K   E+ A  Q  L  +E    +   E  +     +       +   E      
Sbjct: 1882 EDTMRSKEQAEQEAARQRQLAAEEEQRRREAEERVQKSLAAEEEAARQRKAALEEVERLK 1941

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 1942 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 1979


>gi|239833698|ref|ZP_04682026.1| secretion protein HlyD family protein [Ochrobactrum intermedium LMG
           3301]
 gi|239821761|gb|EEQ93330.1| secretion protein HlyD family protein [Ochrobactrum intermedium LMG
           3301]
          Length = 352

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 53/407 (13%), Positives = 114/407 (28%), Gaps = 80/407 (19%)

Query: 19  RMTLLSIIGIIG--LITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           R  L  IIG+ G  ++ W+  L P + SV ++        V  I    +G + K  V + 
Sbjct: 11  RGGLALIIGLAGVLMVLWAWQLPPFKHSVETTDNAYVRGQVTVISPQVAGYVTKVNVNDY 70

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + QG  L   +       +D    ++ + +  +                         
Sbjct: 71  QSVKQGDLLFEIDSRSYQQKLDQALAALNSKKAALA------------------------ 106

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                             N   S       ++  +             + S  +A L   
Sbjct: 107 ------------------NSEQSQRSAEATIQSRQ------------AQISGAKAALEVA 136

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + +   ++ L  +   +Q+           +   L +     +     +     +     
Sbjct: 137 EANAKRVEALLPRGVTTQS-------SADTAHGSLLQAQAAVEEAEAALAVAQQDLQSII 189

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            N    ++ D+   + T         +     +   I++P  GT+          Y    
Sbjct: 190 VNRDS-LNADIANAEATV-------ELARIDLQNTHIIAPRDGTLGEVGVR-LGQYVTAG 240

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKKFKAIIEKIDPII 374
             L+ +VP SK  ++ A     Q+  +K G   T         +   + +A         
Sbjct: 241 TQLVSVVPKSK--WVMANFKETQLYGMKVGQPVTFTVDALRHAKLTGRIEAFAPAAGSEF 298

Query: 375 SQQDNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTA 417
           S   ++  T  + ++     ++I       +   L  G    V    
Sbjct: 299 SVIKSDNATGNFTKITQRLSVRIAIDEDQPDAARLAPGMSVVVRVDT 345


>gi|254282089|ref|ZP_04957057.1| RND efflux membrane fusion protein [gamma proteobacterium NOR51-B]
 gi|219678292|gb|EED34641.1| RND efflux membrane fusion protein [gamma proteobacterium NOR51-B]
          Length = 318

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 61/170 (35%), Gaps = 11/170 (6%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + ER+  ++ +    N  E   +    +E   +  L      ++     ++ +   A+ 
Sbjct: 79  LELERVQVQAKINAATNAMETAEIDVRRSENLFDQGLASRREFEQARIKAQELRSKLAEA 138

Query: 277 MSKLTILEKTREQK---TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +++  ++    ++   T+ +P AG I+   +  ++ +      +   VP      +   
Sbjct: 139 EAEMNRIDINLSRQSVQTVRAPRAGRIIRVNAGDNATFINAGDRIATFVPADVERAVELY 198

Query: 334 VTPKQIQHVKKGYTATVRF--------PHYADIREKKFKAIIEKIDPIIS 375
           +  + +  V  G    ++F          +  I    F  I+  +DP  S
Sbjct: 199 IDGRDVALVTTGAHVRLQFEGWPVIQLSGWPSIAVGTFDGIVTAVDPSAS 248



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 62/161 (38%), Gaps = 18/161 (11%)

Query: 42  ISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            + + +G +      D + +I +  +G I +F V +GS + +G P++   D +       
Sbjct: 20  QTTAGAGRVTALNPNDRMQDINALVAGRIDQFYVRDGSIVEKGDPIVKLVDNDP------ 73

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                 NL   ++ E+  +    N      +  E    +  +   +  ++  +     I 
Sbjct: 74  ------NLLQRLELERVQVQAKINAATNAMETAEIDVRRSENLFDQGLASRREFEQARIK 127

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           +  + L+ KL    +  +NR+D+      ++ + +     +
Sbjct: 128 A--QELRSKLAEAEA-EMNRIDINLSRQSVQTVRAPRAGRI 165


>gi|332308851|ref|YP_004436701.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332176180|gb|AEE25433.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 666

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 64/203 (31%), Gaps = 35/203 (17%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L +  E    A    ++ L   +R      +   + +  L   +K R+  T  +P  G 
Sbjct: 160 ELVNAQEELLIAMRRGSDDLISAARSRLDALQMPNEAIQSLISSKKVRQTITFSAPQTGF 219

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +          + +    L+ I    +  ++ A++  +Q   V  G   T+       + 
Sbjct: 220 VDNLNIR-EGFFIKPGNTLLSIGALDE-VWVDAEIFERQSAQVTVGLPVTMTL---DFLP 274

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF---------- 409
            K ++  ++ + P + Q    L       V L+     F + +  L+             
Sbjct: 275 GKTWEGEVDYVYPTLEQSTRTL------RVRLR-----FKNADYALKPNMFAQITIHSDF 323

Query: 410 -------PAEVLFTAK--NTTLA 423
                  P+E +      +  + 
Sbjct: 324 DSDNVLVPSEAVIRTGTQDRVVL 346


>gi|302129903|ref|ZP_07255893.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato
           NCPPB 1108]
          Length = 388

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 52/140 (37%), Gaps = 5/140 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V  G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVREGQQVKAGELLATLDDRSIRASLEQTRAQL 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +D   + LD    +    +     +       L +  +  ++     I++    
Sbjct: 114 AQSKAQLDV--AQLDLKRYRQLTEDNGISRQTFDQQQALVRQLAATAQGNEASINAAQVQ 171

Query: 164 LKMKLTRMRSIYLNRLDLEN 183
           L    T++RS    R+ + N
Sbjct: 172 LS--YTQIRSPVTGRVGIRN 189



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 40/127 (31%), Gaps = 17/127 (13%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L  +       +   E +       +R ++ + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVREG----QQVKAGELLATLDDRSIRASLEQTRAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q   T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTEDNGISRQTFDQQQALVRQLAATAQGNEASINAAQVQLSYTQIR 178

Query: 294 SPIAGTI 300
           SP+ G +
Sbjct: 179 SPVTGRV 185


>gi|261820325|ref|YP_003258431.1| efflux transporter RND family, MFP subunit [Pectobacterium wasabiae
           WPP163]
 gi|261604338|gb|ACX86824.1| efflux transporter, RND family, MFP subunit [Pectobacterium
           wasabiae WPP163]
          Length = 398

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 56/149 (37%), Gaps = 4/149 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  +E +V + G I  +  V  + +  SG IK   V+ G ++ +G  +   +D+   D
Sbjct: 42  AEIADLEQTVLADGNIEAQKQV-SVGAQASGQIKALHVKLGDKVKKGQLIAEIDDLTQQD 100

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +   + ++KN++     + + L   +    +  +L K     +           +T + 
Sbjct: 101 TLKNGEAALKNVQAQRAAKLAELRNNELSWQRQQMLMKRGVGAQADYDSAKATLDATRAN 160

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +       V   L +   ++   Y     
Sbjct: 161 IDALDAQIVQAQLTVNTAKVNLGYTQIRS 189



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 60/204 (29%), Gaps = 22/204 (10%)

Query: 166 MKLTRMRSIYLNRLDLENKSS---LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            ++  +    L   ++E +       +A        + +   + +   +++ D   Q+  
Sbjct: 42  AEIADLEQTVLADGNIEAQKQVSVGAQASGQIKALHVKLGDKVKKGQLIAEIDDLTQQDT 101

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD---------LEQNQRTF 273
           +      L+    ++   L  +         +     + +            L+  +   
Sbjct: 102 LKNGEAALKNVQAQRAAKLAELRNNELSWQRQQMLMKRGVGAQADYDSAKATLDATRANI 161

Query: 274 ADEMSKLTILEKTRE-------QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPH 324
               +++   + T            I SP+ GT+V      +       Q    I  V +
Sbjct: 162 DALDAQIVQAQLTVNTAKVNLGYTQIRSPMDGTVVAIPV-EAGQTVNAIQTTPTIAKVAN 220

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTA 348
                I+ K++   +  VK G   
Sbjct: 221 LDTMTIKVKISEADVVKVKTGMPV 244


>gi|89072409|ref|ZP_01158988.1| putative secretion protein [Photobacterium sp. SKA34]
 gi|89051941|gb|EAR57393.1| putative secretion protein [Photobacterium sp. SKA34]
          Length = 349

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 77/275 (28%), Gaps = 37/275 (13%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   +     + ++     ++     L          A L   QK    + +L  +  + 
Sbjct: 97  FEIELEKAKAAYEVATQENKATDDAILAASANVRSADATLVDVQKSYRRVMDLVNRKLLP 156

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
               +  +  +  +   L         ++       DEA                     
Sbjct: 157 LQQGDDAKANLASAQTALEAARANMSQLINQQGAKGDEA-------------------PQ 197

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                + L+          I +P  G++         +       +M ++      +++A
Sbjct: 198 VKQAAAALSQATLNLSYTNIYAPHDGSLGKVSVR-PGSIVSPGLSVMPLI-EDNTAWLQA 255

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----------SQQDNNLQ 382
               K I  +K G  A++    Y D+     +  I  + P            +   N ++
Sbjct: 256 NYKEKSIGLLKPGMKASIVLDMYPDVTY---QGHIIALSPASGSSFSLLPPENATGNWVK 312

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
             + + V ++  DL        LR G  AEV    
Sbjct: 313 VPQRFPVRIQFDDL---KGKPLLRVGASAEVTIDT 344



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 14/148 (9%), Positives = 49/148 (33%), Gaps = 5/148 (3%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           NV+ +    SG +    V +   + +G  LL+ +       ++  K + +          
Sbjct: 60  NVLYVAPQISGKVLTVNVNDYQHVAEGDLLLSIDPAPFEIELEKAKAAYEVATQENKATD 119

Query: 115 SALDFLNNKYDVLEKAFESRE---EQLLDFLGK--YHSTCSKVFNYGISSVYRSLKMKLT 169
            A+   +      +      +    +++D + +              ++S   +L+    
Sbjct: 120 DAILAASANVRSADATLVDVQKSYRRVMDLVNRKLLPLQQGDDAKANLASAQTALEAARA 179

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQK 197
            M  +   +    +++  ++   ++  +
Sbjct: 180 NMSQLINQQGAKGDEAPQVKQAAAALSQ 207


>gi|327412669|emb|CAX67663.1| putative HlyD family secretion protein [Yersinia enterocolitica]
          Length = 349

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 93/288 (32%), Gaps = 26/288 (9%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                L   +    S++       +V E +   R + L       +    +     +   
Sbjct: 42  SEDAELGASVVHIASSVPGRIISINVEENSKVRRGDLLFSIEPDLYRLQVEQAQAELKMA 101

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +   +   + +   N      +    +A L    + L  ++ L  K  V+   ++   
Sbjct: 102 EAARDTQQRTVVAEQSNAAITNEQIVRAQANLKLATQTLARLQPLLPKGYVTAQQVDDAA 161

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
              + + + L++ + +       ++                       ++       + L
Sbjct: 162 TAKHDAEVSLKQALKQSFAAEALVSST-------------------AASEALVVARRAAL 202

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            I E+      I +P  G +V     S+  +    Q +  ++ +++  +  A     +++
Sbjct: 203 AIAERELANTQIRAPHDGRVVGLTV-SAGEFVVPDQAIFTLI-NTEHWHASAFFRETELK 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD--NNLQTQEY 386
           H+K G  ATV        R++  +  +E I   +S +D  N  +   Y
Sbjct: 261 HIKVGDCATVYVMA---DRQRAIQGRVEGIGWGVSSEDMLNIPRGLPY 305


>gi|256043361|ref|ZP_05446294.1| multidrug resistance protein A [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265989782|ref|ZP_06102339.1| secretion protein HlyD family protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263000451|gb|EEZ13141.1| secretion protein HlyD family protein [Brucella melitensis bv. 1
           str. Rev.1]
          Length = 314

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 49/396 (12%), Positives = 114/396 (28%), Gaps = 85/396 (21%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M+LL +I  +  +  +            GE +    +   +      ++   V+ G ++ 
Sbjct: 1   MSLLCVIPFVSSLFAACGTQSLAVGYVEGEFVQLAPLQVAQ------VRDIAVKRGDRVE 54

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P+ T ED +                  I   ++       +  +       R E++ 
Sbjct: 55  AGEPIATVEDTD----------------ARIAVAQAEAALAQAQAQLANLQVGKRPEEIA 98

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                                    LE      RA     Q+ L
Sbjct: 99  V----------------------------------------LEAAVRSARAQADDAQRTL 118

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++L  +   +Q  L+     +  +   + ++       +  +    +E         
Sbjct: 119 LRTRDLARRGVATQAQLDDAATQLEVAEAAIGQSTANL--AVGKLPARPEEIKA------ 170

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                     +       ++L   +  R Q+TI +P AG I      +  + A  S P++
Sbjct: 171 ---------AENAVKSAEAQLQTAKWQRAQRTIEAPAAGRITDV-VRNLGDIAGPSAPVL 220

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++P      ++  +  ++   V  G         + D      +A +  + P       
Sbjct: 221 TMLP-DGAVKLKVYIPEERFSDVAVGSV----LSVHCDGCAPGLQARVSYVSPDPEFTPP 275

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + + E  + ++ + +    D    L+ G   +V  
Sbjct: 276 VIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 311


>gi|85373727|ref|YP_457789.1| heavy metal RND efflux membrane fusion protein, CzcB family protein
           [Erythrobacter litoralis HTCC2594]
 gi|84786810|gb|ABC62992.1| heavy metal RND efflux membrane fusion protein, CzcB family protein
           [Erythrobacter litoralis HTCC2594]
          Length = 502

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 39/149 (26%), Gaps = 32/149 (21%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           T+ +P +G I               Q L +I       ++ A V      + + G   + 
Sbjct: 219 TVTAPQSGAITSLAVR-PGMTVAAGQSLAEIS-GYSPIWLEAAVPEALAGNARVGQPVSA 276

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF- 409
               +   R   F   I  I P        +               A  +  + L+ G  
Sbjct: 277 TLTAFPGER---FAGRIIAILPSAQDASRTITV-----------RAAMPNPGLRLKPGMF 322

Query: 410 ---------------PAEVLFTAKNTTLA 423
                          P+E +      TLA
Sbjct: 323 AQVMLAPERREALLVPSEAVIRTGERTLA 351


>gi|323704625|ref|ZP_08116203.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323536087|gb|EGB25860.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 589

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 48/175 (27%), Gaps = 16/175 (9%)

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +        +E  N  +++   L   Q       +       T   + I+SP +G +  
Sbjct: 80  KVKAGELLYQIEDDNLNQQVQNALISVQLAQQQLDNDTKTYNNTVSNQNIVSPYSGIVDS 139

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +          +  I        +R      QI  +K G +A +    Y       
Sbjct: 140 VNVST-GQNVNPGTTIATIA-DYSNATVRVPFNGSQINDIKVGQSADI----YLYDSFAT 193

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
               +      +S Q   +    YY V + + +     +  +       +V    
Sbjct: 194 VTGTVT----DVSTQAIPVNGAPYYYVTVTLPNPGALTDGSK------VQVTVHT 238



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 8/77 (10%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF----EDIET-TDL 95
           +      G +  +     + S   G +    V+ G +I  GT L T     +D     D 
Sbjct: 242 DERAIQDGTLSVKTTN-IVSSQIQGTVASVNVKQGQKINAGTILATLTTNVDDTAIKRDQ 300

Query: 96  IDLKKVS--IKNLRCHI 110
           ++L++      NL+  +
Sbjct: 301 LNLQQAQNNYSNLQSQL 317



 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 39/108 (36%), Gaps = 18/108 (16%)

Query: 21  TLLSIIGIIGLITWSILLPIEI---------SVSSSGEIL----NEDNV---VEIKSPFS 64
            +++++ I+G   +     ++          +  + G I+       N+     + +   
Sbjct: 8   IIVALVLIVGSTAY-YFAKVKNTQKTSGAPYATVTRGNIVMHIDGSGNLDVDKRVITLKG 66

Query: 65  -GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            G + K   + G ++  G  L   ED      +    +S++  +  +D
Sbjct: 67  NGTVAKVYHKVGDKVKAGELLYQIEDDNLNQQVQNALISVQLAQQQLD 114


>gi|307825047|ref|ZP_07655268.1| efflux transporter, RND family, MFP subunit [Methylobacter
           tundripaludum SV96]
 gi|307733795|gb|EFO04651.1| efflux transporter, RND family, MFP subunit [Methylobacter
           tundripaludum SV96]
          Length = 381

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 101/291 (34%), Gaps = 21/291 (7%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E +    G+  +T S      + +  R+     T  +   L+  + +N     + LL   
Sbjct: 34  EIVTLEQGEVKATVSNTRVGTVKACRRAYLAPATGGQVAELHVKEGDNVKQN-QLLLEIW 92

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            KDL     L +    +Q   N+             E   ++   L+  + +  E  ++ 
Sbjct: 93  NKDLKAQVKLQD----AQIRANRASAEQACQLGAGAEREADRALRLQKFDHIISEEQVDI 148

Query: 256 -ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A   +             A   +    ++   E+  +L+P  GT+    +     +   
Sbjct: 149 KATGARAKRASCTAALEAIAVSQANRDAVQAAVERTLVLAPFDGTVAEINA-ELGEFITP 207

Query: 315 SQPLMKIVPHSKLT-----YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           S P +  +P   L      Y+ A +       +K G +A V    + D   K+    + +
Sbjct: 208 SPPGIPTLPAIDLLDVSCLYVSAPIDEVDAPQIKTGMSACVSLDAFTD---KRCSGTVSR 264

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           I P + +++   +T    EV +K+TD         L  G+ A++     + 
Sbjct: 265 IAPYVLEKEKQARTV---EVEVKLTDPKDLKG---LLPGYSADIEVLLSSK 309



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 50/157 (31%), Gaps = 14/157 (8%)

Query: 37  LLPIEISVSSSGEI---LNEDNVVEIK--------SPFSGIIKKFQVENGSQILQGTPLL 85
            + +EI     GE+   ++   V  +K            G + +  V+ G  + Q   LL
Sbjct: 30  FVDVEIVTLEQGEVKATVSNTRVGTVKACRRAYLAPATGGQVAELHVKEGDNVKQNQLLL 89

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
              + +    + L+   I+  R   +      +  +   ++   L+K      E+ +D  
Sbjct: 90  EIWNKDLKAQVKLQDAQIRANRASAEQACQLGAGAEREADRALRLQKFDHIISEEQVDIK 149

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
                         + ++  S   +     ++    +
Sbjct: 150 ATGARAKRASCTAALEAIAVSQANRDAVQAAVERTLV 186


>gi|262401674|ref|ZP_06078240.1| membrane-fusion protein [Vibrio sp. RC586]
 gi|262352091|gb|EEZ01221.1| membrane-fusion protein [Vibrio sp. RC586]
          Length = 365

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 56/180 (31%), Gaps = 18/180 (10%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           E+   L  + +    A     N   +             D  S L+ +++  E   + +P
Sbjct: 123 ERAKALLKVRQQEFNAANALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLENTQVRAP 182

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G I         ++     P+  I+       I A V+ + IQHV+    A +RF   
Sbjct: 183 FDGVIEALPI-EKGDFVGIGDPVASII-DLHKLVIEADVSERHIQHVQLEQLARIRF--- 237

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             I     +  +  I  + S   N               ++   +    +  G  AEV  
Sbjct: 238 --IDGSLTQGKVRYISRLSSPATNTFAI-----------EVEMDNPQQTIPAGVSAEVEI 284



 Score = 43.5 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 61/179 (34%), Gaps = 10/179 (5%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
              +  +   G    +     I +  +G I + ++  G  + +G  +   +  +    ++
Sbjct: 65  AQTDKVIELYGRTAPDRQAQ-IGAEIAGRIIEIKIAKGQTVGKGQVIAVIDKGDLDAQLE 123

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K  +K  +     E +A + L NK    E AF +    L D      +    + N  +
Sbjct: 124 RAKALLKVRQ----QEFNAANALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLENTQV 179

Query: 158 SSVYRSLKMKLTRMRSIYLNRLD-----LENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            + +  +   L   +  ++   D     ++    ++ A +S        ++ L     +
Sbjct: 180 RAPFDGVIEALPIEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQLARIRFI 238


>gi|262273635|ref|ZP_06051449.1| probable Co/Zn/Cd efflux system membrane fusion protein [Grimontia
           hollisae CIP 101886]
 gi|262222613|gb|EEY73924.1| probable Co/Zn/Cd efflux system membrane fusion protein [Grimontia
           hollisae CIP 101886]
          Length = 366

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 66/193 (34%), Gaps = 24/193 (12%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEI----SRDLEQNQRTFADEMSKLTILE 284
            L   +               EA  +    L E        L++ +  F   ++ +  L 
Sbjct: 97  ALDSKVEAANLKSTQARLPAAEAKYKRYQGLFEKGSISKEALDEAEANFRSLLADVESLN 156

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQHV 342
            + +++TI +P  G IV  ++     Y Q      +IV     + +R +  V    I  +
Sbjct: 157 ASIDRRTIDAPFDG-IVGLRNVFLGEYLQPGN---EIVRLEDTSIMRLRFTVPQTDIAKI 212

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           + G    +    Y D     F   I  I+P ++ Q   +Q Q               +N+
Sbjct: 213 RLGQQIDISVDAYPDT---PFTGKISAIEPAVNFQSGLIQVQ-----------ADIPNNH 258

Query: 403 IELRNGFPAEVLF 415
            +LR+G  A    
Sbjct: 259 GQLRSGMFARANI 271



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 94/290 (32%), Gaps = 30/290 (10%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G I     V  + S  SG+I+    E+G  + QG  L+  +       +   +  +  
Sbjct: 58  AIGFIEPNQGV-TLTSEVSGVIETINFESGQTVKQGDVLVALDSKVEAANLKSTQARLPA 116

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                   +   +  +   + L++A  +    L D      S   +  +     +     
Sbjct: 117 AEAKYKRYQGLFEKGSISKEALDEAEANFRSLLADVESLNASIDRRTIDAPFDGIVGLRN 176

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS------------- 212
           + L          + LE+ +S++R   +  Q D+  ++ L ++  +S             
Sbjct: 177 VFLGEYLQPGNEIVRLED-TSIMRLRFTVPQTDIAKIR-LGQQIDISVDAYPDTPFTGKI 234

Query: 213 ---------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL--KE 261
                    Q+ L Q +  +  +  +LR  +  + N++    E     +    N+    E
Sbjct: 235 SAIEPAVNFQSGLIQVQADIPNNHGQLRSGMFARANIILPTIENQIVVDQTAINFTLYGE 294

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               L + +         + + E+      +L    G    ++  +S   
Sbjct: 295 NVYVLREEEGELRAYQQVVKVGERKGHVAHVL---EGLKAGDKVVTSGQV 341


>gi|254498653|ref|ZP_05111371.1| truncated secretion protein HlyD family protein [Legionella
           drancourtii LLAP12]
 gi|254352101|gb|EET10918.1| truncated secretion protein HlyD family protein [Legionella
           drancourtii LLAP12]
          Length = 277

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 79/225 (35%), Gaps = 21/225 (9%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + F   ++     L      + S+  N  + + + +L R   +   ++     +L  K+
Sbjct: 12  PQPFKVALAKAESKLAQVTIDLMSLKANYREKQAEIALARTKYNFSLRNKKRQSDLAAKH 71

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             SQ+ L+        + +  ++ I  ++N+      L    N     +   +       
Sbjct: 72  FTSQSSLDD---ASESAEIAAQQIITTEQNLQSLAESLAGSVNTPIEQHPSYLVA----- 123

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                   ++L   +       + +P+ GTI  N       Y  Q    M +V  ++  +
Sbjct: 124 -------KAELEQAQLNLAHTEVKAPVTGTI--NIPPKQGQYVSQGIISMSLV-ANEHPW 173

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           I A  T K++ +V+ G         Y     KK+  +++ I P  
Sbjct: 174 IEANFTEKELTYVRPGQKVVTTIDIYP---GKKWTGVVQSISPAT 215


>gi|237736293|ref|ZP_04566774.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
 gi|229421641|gb|EEO36688.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
          Length = 443

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 51/389 (13%), Positives = 132/389 (33%), Gaps = 57/389 (14%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +G ++    +  +      +I++  V++G +I + T L+ F          + +      
Sbjct: 51  TGMVVP-GEIKPVYISAPAVIERILVKDGEEITKDTELILF------SNKSIMENDKALR 103

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              +D +   L   +     ++   ++RE ++ +   K  +   ++    ++   R+L+ 
Sbjct: 104 VNELDIQNVKLQIADLDSGSMKLELDNRELEIKNLEEKIKADMRRL--PVVTEEARTLQK 161

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           +      +         ++S +       Q +L  +K           +LN+Q+  +   
Sbjct: 162 RAEAYMQLLSKDGVSATEASRINTESGRKQVELEDLKT--------NLELNRQKHQLMVV 213

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           +       +E      +I E    ++LE      E  +  E+  +          ++   
Sbjct: 214 S-------YESLKRELNIEEAKLRSSLEKLELENETLKIREKQLKEPLTAGVDGVVVGID 266

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            +                     +  Q  + L+  V  +    +  +V   Q   + KG 
Sbjct: 267 VQ-------------------EGSVTQPGERLLA-VSTTGGNRVNVEVPLYQSSAIAKGQ 306

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            A +         +K++K  +EK+         +   ++  +V + I +        +LR
Sbjct: 307 PAII--VSRDSDGDKQYKGKVEKVSTAAVDSKYSKTKEKVIQVEVSIDEEN------DLR 358

Query: 407 NGFPAEVLFTAKNTTLAQEIIHPITDNWP 435
            GF A+V  + +  T       P+ +++ 
Sbjct: 359 PGFIADVEISGQAKTAV-----PVVNSFS 382


>gi|225572649|ref|ZP_03781404.1| hypothetical protein RUMHYD_00837 [Blautia hydrogenotrophica DSM
           10507]
 gi|225039991|gb|EEG50237.1| hypothetical protein RUMHYD_00837 [Blautia hydrogenotrophica DSM
           10507]
          Length = 450

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 92/272 (33%), Gaps = 40/272 (14%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SVS +G++ +   +     P    +    V+ G Q+ +G  L   +           
Sbjct: 45  LDYSVSGNGKVESSRELAVFTVPEM-KVSSLNVQEGEQVKKGELLFQVD----------- 92

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             ++K  R  + TE           D   K  + ++E+ +    + +    +  +  ++ 
Sbjct: 93  LNTLKKKRSSLMTELEQAKLTKEDADSQAKTTQEKQEEEISHARENYDQAVESADQAVAM 152

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             + L +   ++   Y       ++SS      S+ + + +++  ++EK           
Sbjct: 153 AQQDLDLAREKLNDFYNT-----SESSFSGEGQSAQESEQSLLDEIYEK----------- 196

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E+ +  +  E  ++I   +  L   +   ++ +      L    + LE +Q     +   
Sbjct: 197 EKALELAFTEREKSISAARQALESASLPIEKNSTAQIQQLNVEQKQLELDQINALWQKE- 255

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                       + +P  GT+      +    
Sbjct: 256 ----------GKVYAPADGTVSKWNVKT-GGV 276


>gi|209515628|ref|ZP_03264492.1| secretion protein HlyD family protein [Burkholderia sp. H160]
 gi|209503864|gb|EEA03856.1| secretion protein HlyD family protein [Burkholderia sp. H160]
          Length = 375

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 80/256 (31%), Gaps = 20/256 (7%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           ++   R DLE     + A  +  +  L  ++        ++ D  + ER+  +    +  
Sbjct: 99  AVVRARADLETTRRQVGASTAGIESALAGLRAAIANEVKARQDSERLERLYREDEGTVSL 158

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              E         +             +E     E            L   E       I
Sbjct: 159 RRLEIARATHEQAQSQVAGARAEVERAREQQGGNEAENAQLRSAAGALEKAELDLANARI 218

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +  +G +   ++     +A    P+M ++      +I A +T   + H+K G    +  
Sbjct: 219 RARSSGVVTDLRT-EVGQFAAAGSPVMTLIAIRD-VWISADMTENNLGHLKPGSRVEI-- 274

Query: 353 PHYADIREKKFKAIIEKID--------------PIISQQDNNLQTQEYYEVILKITDLAF 398
                +  + F   +  I               P +    + L+  + + VI++  +   
Sbjct: 275 -ALDVLPGEVFDGRVRSIGYGVSVGQSTPAGSLPTVQNSRDWLRPAQRFPVIVEFDESER 333

Query: 399 SDNNIELRNGFPAEVL 414
           +    +LR G  AEV+
Sbjct: 334 ARLR-DLRVGGQAEVM 348



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/303 (10%), Positives = 85/303 (28%), Gaps = 27/303 (8%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
              +     +  I+  + W +L   +     + +   +  VV + +  SG + +  V N 
Sbjct: 22  PSSKAVKWVVGLIVLSLIWYLLA--DRFTPYTHQARIQAYVVPVAAEVSGRVTRVLVHNN 79

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  L   +       +   +  ++  R  +    + +          E A     
Sbjct: 80  QDVNAGDVLFEVDSEPYRIAVVRARADLETTRRQVGASTAGI----------ESALAGLR 129

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             + + +     +      Y          + L R+          +++ +  RA +   
Sbjct: 130 AAIANEVKARQDSERLERLYR----EDEGTVSLRRLEIARATHEQAQSQVAGARAEVERA 185

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN--IHEQKNMLRHINELYDEANL 253
           ++     +    +   +   L + E  +  + +  R +  + + +  +            
Sbjct: 186 REQQGGNEAENAQLRSAAGALEKAELDLANARIRARSSGVVTDLRTEVGQFAAAGSPVMT 245

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A     IS D+ +N        S++ I               G +   +  S      
Sbjct: 246 LIAIRDVWISADMTENNLGHLKPGSRVEIALDVLP---------GEVFDGRVRSIGYGVS 296

Query: 314 QSQ 316
             Q
Sbjct: 297 VGQ 299


>gi|153806346|ref|ZP_01959014.1| hypothetical protein BACCAC_00605 [Bacteroides caccae ATCC 43185]
 gi|149131023|gb|EDM22229.1| hypothetical protein BACCAC_00605 [Bacteroides caccae ATCC 43185]
          Length = 416

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/312 (13%), Positives = 109/312 (34%), Gaps = 20/312 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTCSK 151
            + I + +V   +   ++D E      L  K +  E  + ES   +    L +  +    
Sbjct: 45  AENIQIAEVKDADFMEYVDVEGLIQPILTIKVNTREAGSVESIVGEEGSLLQQGDTILIL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + ++         +M +     +++E KS  L+    ++  +L  +K        
Sbjct: 105 SNPDLLRNIEDQRDEWEKQMITYQEQEIEMEQKSLNLKQQALTNNYELERLK-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        + +  + E +   +  N    + +L   + +  I ++L +N R
Sbjct: 157 -KSIALDREEYQMGVKSKAQLQVAEDEYNYKQKNAALQQESLRHDSAVTMIRKELIRNDR 215

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  K   + +      + +PI G + + +  +        + + +I        I 
Sbjct: 216 ER--ERKKYERVHERLNNLVVTAPIKGQLSFVKV-TPGQQVSSGESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPI-ISQQDNNLQTQE 385
             ++   I  +  G  AT+ +    Y     K    + ++   +D +      +N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATINYQGKKYPLRITKVVPEVKDRMFDVDLVFTDDMPDNVRVGK 331

Query: 386 YYEVILKITDLA 397
            + V +++    
Sbjct: 332 SFRVQIELGQPE 343


>gi|89075701|ref|ZP_01162096.1| hypothetical protein SKA34_10258 [Photobacterium sp. SKA34]
 gi|89048564|gb|EAR54138.1| hypothetical protein SKA34_10258 [Photobacterium sp. SKA34]
          Length = 377

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 58/158 (36%), Gaps = 19/158 (12%)

Query: 18  KRMTLLSIIGIIGLITWSILLP----------------IEISVSSSGEILNEDNVVEIKS 61
           + + + ++  I  L  +++  P                IE    + G+I+    V  IKS
Sbjct: 4   RWIVVATLSAIAALGIYAVKAPSSDEHHFTMLTAKNATIEKQAIAVGQIMPTQAVK-IKS 62

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              GI+ +  V  G ++  G+P++           DL +V+   L+   D E + +   N
Sbjct: 63  QIEGIVDEIYVNLGDKVEVGSPVIKLRPNPAPQ--DLTRVNADLLKSKADLESAKIRLAN 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            K    +K   +  +  +       S  +++      S
Sbjct: 121 LKRLAAQKIIPANFDAYIQAQADVKSKTAELKQKQQES 158



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 18/222 (8%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD----EANLEFANYLKEISRDLEQN 269
            DL +    + KS  +L        N+ R   +       +A ++    +K  + +L+Q 
Sbjct: 95  QDLTRVNADLLKSKADLESAKIRLANLKRLAAQKIIPANFDAYIQAQADVKSKTAELKQK 154

Query: 270 QRTFADEMSKLTI-LEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIV 322
           Q+  +D MSK       T+    I +PI GT++  +              Q++  +M + 
Sbjct: 155 QQE-SDLMSKGESDAGSTKLTSIIYAPINGTVLDVKVD-VGEPIDSTGSNQEATEIMTMA 212

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNL 381
              K    +  V+      + +G    +    Y D++   K   +  + + +   +DNN 
Sbjct: 213 -DMKNIIFKGSVSEHDAAQLTEGMPVELTLAPYPDLKIAGKLTEVAVQSEKLNDDKDNNT 271

Query: 382 QTQEYYE--VILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           Q  + ++    ++++D+ F    I LR+GF A    T K  T
Sbjct: 272 QQTQSFDNGFAVEVSDIKF-PKGITLRSGFTATAHITLKKAT 312


>gi|320196710|gb|EFW71333.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor protein YbhG [Escherichia coli
           WV_060327]
          Length = 331

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 92/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|299069456|emb|CBJ40723.1| putative cation transporter transmembrane protein [Ralstonia
           solanacearum CMR15]
          Length = 382

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 26/201 (12%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                   + +  +   +  L  + EL D++ +     L++   D  Q         ++L
Sbjct: 128 AQATSDAAKAQSTLALTRRNLERLREL-DKSEIAAKRDLEQAQNDYAQAVSEADRANNRL 186

Query: 281 TILEKTREQKT-------ILSPIAGTIVYNQSFSSSNYAQ-QSQPLMKIVPHSKLTYIRA 332
             L      +        + SPI G +V   + +   Y    + P+M  V      ++ A
Sbjct: 187 AQLGAKGGGQVTGGHILAVRSPITGRVVDLNA-AIGGYWNDATAPVMT-VADLSRVFVTA 244

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
               K +  V  G +ATV+   YAD       A +  +  ++              V ++
Sbjct: 245 SAQEKDLAQVYAGQSATVKLDAYAD----ALPAKVRFVGEMLDPDTRT--------VKVR 292

Query: 393 ITDLAFSDNNIELRNGFPAEV 413
              + F +    L+ G  A+ 
Sbjct: 293 ---MLFDNREGRLKPGMFAQA 310


>gi|197117784|ref|YP_002138211.1| hypothetical protein Gbem_1396 [Geobacter bemidjiensis Bem]
 gi|197087144|gb|ACH38415.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
          Length = 310

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 49/139 (35%), Gaps = 3/139 (2%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
              P    V+ +G I      V + +P  GI+K+  V+ G  +  G PLL  +D +    
Sbjct: 39  AAGPFTSFVAGAGIIEPSSGNVAVGTPVPGIVKRVFVKWGDWVRAGEPLLQIDDRDLRAR 98

Query: 96  IDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +       K      +  +  L   D + ++  +  +  E+R   +           +++
Sbjct: 99  LPSALARKKEAAARFEQARVQLRIADSVPDRRAISLEELETRRAAVAIASAALEGAQAEI 158

Query: 153 FNYGISSVYRSLKMKLTRM 171
                 +  R+++      
Sbjct: 159 EQLKAETSRRTIRAPEQGR 177


>gi|85716659|ref|ZP_01047628.1| Secretion protein HlyD [Nitrobacter sp. Nb-311A]
 gi|85696499|gb|EAQ34388.1| Secretion protein HlyD [Nitrobacter sp. Nb-311A]
          Length = 406

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 16/178 (8%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +  L  E   + A         ++Q Q  F    + +   E    QK + +P  G
Sbjct: 146 KAQATVARLALERAKQLAARQVGPQVTVDQAQAAFDQASAGIAKTEAIISQKLVRAPFDG 205

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +      +      ++ +       +    VT K    +  G T  V    Y   
Sbjct: 206 -VLGVRQVEVGQFLTAGTQVVSLT-DLSTLFANFTVTEKDSARLSVGQTVRVSVDAYP-- 261

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             K F   I  I+P I+ +  N          ++I     +  +I L+ G  AEV+  
Sbjct: 262 -GKTFDGKITTIEPQIATETRN----------IRIQATIANPGDI-LKPGMFAEVIVV 307



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 42/123 (34%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +     GS++++G PL+   D      +   K      R  ++  K          
Sbjct: 111 GRITEILFTAGSRVVKGAPLVQLFDKPEQGDLASFKAQATVARLALERAKQLAARQVGPQ 170

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             +++A  + ++              K+       V    ++++ +  +     + L + 
Sbjct: 171 VTVDQAQAAFDQASAGIAKTEAIISQKLVRAPFDGVLGVRQVEVGQFLTAGTQVVSLTDL 230

Query: 185 SSL 187
           S+L
Sbjct: 231 STL 233


>gi|313202661|ref|YP_004041318.1| efflux transporter, rnd family, mfp subunit [Paludibacter
           propionicigenes WB4]
 gi|312441977|gb|ADQ78333.1| efflux transporter, RND family, MFP subunit [Paludibacter
           propionicigenes WB4]
          Length = 416

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 93/306 (30%), Gaps = 78/306 (25%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +  +G++   + +  + +   G++++  VE GSQ+ QG  ++  ++              
Sbjct: 62  IRINGQVEPINTIQ-LSAIEGGMVEQKVVEEGSQVHQGEVIVRLKNPMLN---------- 110

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                        L+ L+++  + EK    R  Q+                         
Sbjct: 111 -------------LNILDSEAQLAEKQNFLRNTQV------------------------- 132

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                     +   RL L+ +   L   +   ++     K L+ +   SQ D  Q +   
Sbjct: 133 ---------QMEQERLSLKKEKLQLELDVERKKRKFMQYKQLYAEKLCSQEDYLQAKEDY 183

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +    R  +  QK                           + Q + +  +    LT++
Sbjct: 184 EFAVNSRRLVVERQK------------------QDSIYRGIQIRQMEESLHNMRQNLTLV 225

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            +  +   + +P+ G  +                + +I   S    I A +    I  VK
Sbjct: 226 RQRIDNLNVKAPVDGQ-LGLLDVEIGQSVAAGNKIGQISVLSD-YKIEALIDEHYIDKVK 283

Query: 344 KGYTAT 349
            G +AT
Sbjct: 284 AGLSAT 289


>gi|293603582|ref|ZP_06686003.1| macrolide efflux protein MacA [Achromobacter piechaudii ATCC 43553]
 gi|292818018|gb|EFF77078.1| macrolide efflux protein MacA [Achromobacter piechaudii ATCC 43553]
          Length = 395

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 86/273 (31%), Gaps = 22/273 (8%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +    ++ +    +  L  L +E    + +  L +   DLT   +L    A  Q    + 
Sbjct: 58  LDAIERVSVGAQATGQLKSLKVELGDRVKKGQLVAEIDDLTQQNDLRNAEAALQTR--RA 115

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           ER    + L+  E  ++++  +   +    EA       L     ++       A    +
Sbjct: 116 ERAAKVAMLKQAELAYKRQRQMLAADASSREAYESAEATLGVTRAEIASLDAQIAQAEIQ 175

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPHSKLTYIRAKVTPK 337
           +   +       I+SPI G +V              Q    I  V       I+A+++  
Sbjct: 176 VDTAKVNLGYTRIVSPIDGKVVAV-VTKEGQTVNSIQSAPTIIKVAQVDTMTIKAQISEA 234

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----------Y 386
            +  VK G           D R +     +E   P   Q+D+   +             Y
Sbjct: 235 DVTRVKPGLPVYFTILGEPDQRYEATLRAVEP-APDSIQKDDATSSLTSSTGSSTTAAVY 293

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           Y  +  +      + + +LR    A+V      
Sbjct: 294 YNGLFDVP-----NPDEKLRISMTAQVFIVLGE 321



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 54/155 (34%), Gaps = 17/155 (10%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +E SV +SG +   + V  + +  +G +K  +VE G ++ +G  +   +D+   + + 
Sbjct: 46  ANLEDSVLASGTLDAIERV-SVGAQATGQLKSLKVELGDRVKKGQLVAEIDDLTQQNDLR 104

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + +++  R     + + L                ++ +L     +             
Sbjct: 105 NAEAALQTRRAERAAKVAML----------------KQAELAYKRQRQMLAADASSREAY 148

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            S   +L +    + S+       E +    +  L
Sbjct: 149 ESAEATLGVTRAEIASLDAQIAQAEIQVDTAKVNL 183


>gi|121592696|ref|YP_984592.1| secretion protein HlyD family protein [Acidovorax sp. JS42]
 gi|120604776|gb|ABM40516.1| secretion protein HlyD family protein [Acidovorax sp. JS42]
          Length = 405

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 85/292 (29%), Gaps = 26/292 (8%)

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH------- 195
                         +     +L   + + R++Y N   L  +  L  A  +         
Sbjct: 86  AALVQLDPADARVALQQAEANLAQAVRQTRTLYANNSALAAQVRLREAEAARAQAEIARA 145

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + DL   + L  + AVSQ +L   +  +  +  +L             +           
Sbjct: 146 EDDLRRRQALTGEGAVSQEELRHAQSQLQTARTQLAAAQAGVAAAREQLASNQSLTQGVA 205

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                 +     + +  +  +            +  + +P+ G +   ++          
Sbjct: 206 VAQHPSVQAAAAKVREAYLADR-----------RTALPAPVDGYVAR-RTVQLGQRVAAG 253

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV------RFPHYADIREKKFKAIIEK 369
            PLM IVP  +  ++ A     Q+++++ G  AT+      +   Y              
Sbjct: 254 TPLMTIVPL-REVWVDANFKENQLRNLRLGQRATLVADLYGKKVEYTGTVAGLGVGTGAA 312

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
              + +Q       +    V ++I   A       LR G    V    ++ +
Sbjct: 313 FALLPAQNATGNWIKVVQRVPVRIALDAGQLAEHPLRVGLSMNVSVDTQDRS 364


>gi|55980975|ref|YP_144272.1| hypothetical protein TTHA1006 [Thermus thermophilus HB8]
 gi|55772388|dbj|BAD70829.1| conserved hypothetical protein [Thermus thermophilus HB8]
          Length = 437

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 86/266 (32%), Gaps = 26/266 (9%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +++  +     + + S+  +    E   +  +  L + +++L   + ++E    S+
Sbjct: 107 RRQEANLENARLEGQSALASLTASVKSAEIAYANAKQDLETARQNLEATRIVYEAGGTSR 166

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            DL   E     +   L           + +N        + A  L+ +   L Q Q T 
Sbjct: 167 QDLLAAEAAYAAAERALENAEAALAAQRKALNLR----EAQLAKELEALQEALRQAQLTL 222

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A     L  +E       + +P +G ++  ++ S          L+ +   S    +  +
Sbjct: 223 ASAREDLEAVE-------VKAPFSGVVLSQEA-SLGAQVSPETALLTLGDLSAFRLV-LQ 273

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V   +I  V+ G    V             +  +    P     +N       +EV +++
Sbjct: 274 VDETEIGKVQVGQKVAVTLDGLPGET---LEGEVVAKSPKAELVNNI----PVFEVTVRL 326

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN 419
                   +  LR G  A+     + 
Sbjct: 327 ------PADPRLRPGMSADGEIVVQE 346


>gi|325525234|gb|EGD03099.1| multidrug resistance protein MdtN [Burkholderia sp. TJI49]
          Length = 349

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 78/215 (36%), Gaps = 6/215 (2%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P++  R+  L+I+ + G+   +       +  S+ +   + +VV + SP  G I +  
Sbjct: 7   SRPSAKGRVIALAIVAL-GIAALAYAYHRTTAYPSTDDASIDADVVHVASPVGGRIVRLA 65

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V    ++ +G  L   + +     +   +  ++  R  +DT + +L    +   V     
Sbjct: 66  VHENQRVAKGDLLYEIDPVPYRLTVAQAQADVELARASLDTRRRSLIGERSNAAV-AAGQ 124

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             R +Q  D   +     + +   G  S  +       R R   ++    + +    RA 
Sbjct: 125 VKRAQQNHDLATRDVERLAPLAAQGYVS-AQQFDQAKVRQRDAAVSLAQAQEQQ---RAS 180

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             +   +   +  L  + A      +  E  V ++
Sbjct: 181 AQTIGDEADAIATLHAREAALARAQHALEDTVVRA 215


>gi|306845681|ref|ZP_07478250.1| exopolysaccharide biosynthesis protein Bme11 [Brucella sp. BO1]
 gi|306274002|gb|EFM55829.1| exopolysaccharide biosynthesis protein Bme11 [Brucella sp. BO1]
          Length = 415

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 77/221 (34%), Gaps = 14/221 (6%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+     +    + ++  +    R   + E    DF     +       +  + 
Sbjct: 151 VTAGMQLI--SAQQEYADLQMQITAQTIRRARFEAELKGTDFTYAVPEQ-----TAANKD 203

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++            +F+   +++    +    +  S       L+    L    +   Q+
Sbjct: 204 MVALTRHMVEGERTLFDVRRNNLAAERRALEAQAASYGDEITTLQQSIKLHDTEIQLLQE 263

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDE 250
           ++   K+L ++   +++ L   ER +  +  +       L      Q  + + I  L + 
Sbjct: 264 NVNSSKSLVDRGLAAKSSLRDMERDLSSTRRDALELASFLARARQNQLAVEQRIANLDET 323

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              E A+ L+EI  ++ + QR    ++  +  + K+  Q +
Sbjct: 324 RRSEAASSLQEIDLNMARMQRRSNSQLEAMAEIAKSSGQIS 364


>gi|298485867|ref|ZP_07003943.1| Probable Co/Zn/Cd efflux system membrane fusion protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
 gi|298159556|gb|EFI00601.1| Probable Co/Zn/Cd efflux system membrane fusion protein
           [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 388

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 4/188 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V+ G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVKEGQQVKAGELLATLDDRSIRASLEQARAQL 113

Query: 104 KNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +  +D  +  L     L     +  + F+ ++  +           + +    +   
Sbjct: 114 ARSKAQLDVAQLDLKRYRQLTQDNGISRQTFDQQQALVRQLEATAKGNEASINASQVQLS 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y  ++  +T    I         + S    L S  Q D   ++    +  +        E
Sbjct: 174 YTQIRSPVTGRVGIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAE 233

Query: 221 RIVYKSTL 228
           R       
Sbjct: 234 RSAATVKA 241



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 77/252 (30%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L ++       +   E +       +R ++ + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVKEG----QQVKAGELLATLDDRSIRASLEQARAQLARSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTQDNGISRQTFDQQQALVRQLEATAKGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P     + +   A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAERSAA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TV+              +  +  ID  +S     ++               F +   +L 
Sbjct: 238 TVKAYQGDGAANGLLLGEGTLSLIDNQVSATTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|296120638|ref|YP_003628416.1| peptidase M50 [Planctomyces limnophilus DSM 3776]
 gi|296012978|gb|ADG66217.1| peptidase M50 [Planctomyces limnophilus DSM 3776]
          Length = 736

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 89/277 (32%), Gaps = 31/277 (11%)

Query: 171 MRSIYLNRLDLENKSSLLRAL--LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           +RS    R+      S+L     +   +  +   + L +K  V+   L   E ++ +   
Sbjct: 462 VRSPVSGRVIFATSKSILTQGEIILELEDRVQKQRLLQQKARVATQRLL-LEGLLQRQVF 520

Query: 229 E--LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           E  ++  I   K  L+ + E   +   E   +  +             +  +K  I  + 
Sbjct: 521 EPAVQAMIPTAKQELQDLEEQLAQWEAEEQRHQLKALVSGRLITIPRTESQAKSAIQMED 580

Query: 287 REQKTILSPI-AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
             ++ +  P  +G+I+   +     + +    L  I P      +  +V+   I  V  G
Sbjct: 581 PLRRELALPNWSGSILDPSNR--GAFVEAGAELAWIAPQPG-YDVLMRVSQSDIVRVSPG 637

Query: 346 YTATVRFPHYADIREKKFKAIIEKID--PIISQQDNNLQT------------QEYYEVIL 391
               +         ++  K  I +I   PI +    N  +            Q  YEV  
Sbjct: 638 QEVIIWL---QSATQRLLKGTITEISNAPIATTGTVNSASGSKWGFPAFTSDQRVYEVKA 694

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
            + D +      ++  G P          +  + ++ 
Sbjct: 695 TLNDAS-----EQVLTGMPVTAKIQLPPESWFRWLMR 726



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 77/185 (41%), Gaps = 19/185 (10%)

Query: 4   FMWKNLKRNHPA--SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           ++    ++N       + + L  ++ + G + W    P   S+++ G ++  + V  ++S
Sbjct: 410 YLTDTQRQNALRTTRARLIALAIVLLVTGGLLW----PWPASMTADGYVIPHEGV-IVRS 464

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           P SG +      + S + QG  +L  ED        ++K  +   +  + T++  L+ L 
Sbjct: 465 PVSGRV--IFATSKSILTQGEIILELED-------RVQKQRLLQQKARVATQRLLLEGLL 515

Query: 122 NK---YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +      ++    + +++L D   +     ++   + + ++     + + R  S   + 
Sbjct: 516 QRQVFEPAVQAMIPTAKQELQDLEEQLAQWEAEEQRHQLKALVSGRLITIPRTESQAKSA 575

Query: 179 LDLEN 183
           + +E+
Sbjct: 576 IQMED 580


>gi|188994580|ref|YP_001928832.1| ABC transporter permease [Porphyromonas gingivalis ATCC 33277]
 gi|188594260|dbj|BAG33235.1| ABC transporter permease [Porphyromonas gingivalis ATCC 33277]
          Length = 417

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 51/392 (13%), Positives = 115/392 (29%), Gaps = 106/392 (27%)

Query: 24  SIIGIIGLITWSILLP-------------IEIS--------VSSSGEILNEDNVVEIKSP 62
             I I+ L  W++                I+          V  +G++   +++  I + 
Sbjct: 22  GAIVILALAAWAVFGNHSTKFRAERARISIDSVRRGEFNDYVRINGQVQPINSIQ-ISAV 80

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G++ +  VE G+ + +G  ++   +                           L+ L++
Sbjct: 81  EGGMVAEKTVEEGAMVHKGDIIVRLTNPMLN-----------------------LNILDS 117

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  + EK    R  Q+                                   +  +RL+L+
Sbjct: 118 EAQLAEKQNFLRNTQVT----------------------------------MEQDRLNLK 143

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +S  LR  +   ++       L+++   S+ +  Q     Y+  +E    + E++    
Sbjct: 144 RESLNLRLDIERKKRKAEQYARLYKEKLCSREEYLQA-GEDYQYAVEGSRLVMERQRQDS 202

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
               +                  + Q + +  +    L ++    E   + +P  G  + 
Sbjct: 203 LYRGI-----------------QVRQMEESLHNMRRNLEMVRARVEDLNVKAPADGQ-LG 244

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR-----FPHYAD 357
                          + +I   S    + A +    I  VK G  A+       F     
Sbjct: 245 LLDVEIGQTVGAGSRIGQINVLSD-YKVEAMIDEHYIDRVKAGLAASFERQGRDFSLRVR 303

Query: 358 IREKKFKAIIEKIDPIISQQ--DNNLQTQEYY 387
               + +    + D +   +  DN    Q YY
Sbjct: 304 KVYPEVRDKQFRTDFVFDGERPDNIRTGQTYY 335


>gi|307596110|ref|YP_003902427.1| chromosome segregation ATPase-like protein [Vulcanisaeta distributa
           DSM 14429]
 gi|307551311|gb|ADN51376.1| chromosome segregation ATPase-like protein [Vulcanisaeta distributa
           DSM 14429]
          Length = 485

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 89/223 (39%), Gaps = 22/223 (9%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF-----------------LNNKYDVLEK 129
            +       + +++ S++ LR  +++++ AL+                  L+N+      
Sbjct: 184 LDISRRESDVSIREKSLEELRQRLESDRKALEEEKAKLAEMSSVMASLIALSNQLTARLS 243

Query: 130 AFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
             ++RE+ L +     +   +K+  +   + S  + L+M+  R+ +      +LE +   
Sbjct: 244 DLDNREKDLAEREKALNEKEAKLRDWEVELKSREQRLEMEAVRIDAENARLRELEKREQE 303

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHI 244
           ++  L    +    +K L  K    Q  LN+ E  +      L      + E+++ L+ +
Sbjct: 304 IKERLEQLARREAELKELERKLNERQEMLNKLEAELKDKEGRLNSLENLLKEREDTLKKL 363

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           +E  ++   E  + L+ +   L + ++   D   +L   E+  
Sbjct: 364 DEEINKRRRELLDKLEPLITKLVEEEKRLTDWEKRLLDKEREL 406


>gi|254691189|ref|ZP_05154443.1| Polysaccharide export protein [Brucella abortus bv. 6 str. 870]
 gi|256256376|ref|ZP_05461912.1| Polysaccharide export protein [Brucella abortus bv. 9 str. C68]
 gi|260756790|ref|ZP_05869138.1| polysaccharide biosynthesis/export protein [Brucella abortus bv. 6
           str. 870]
 gi|260882607|ref|ZP_05894221.1| Bme11 [Brucella abortus bv. 9 str. C68]
 gi|297249734|ref|ZP_06933435.1| polysaccharide export outer membrane protein [Brucella abortus bv.
           5 str. B3196]
 gi|260676898|gb|EEX63719.1| polysaccharide biosynthesis/export protein [Brucella abortus bv. 6
           str. 870]
 gi|260872135|gb|EEX79204.1| Bme11 [Brucella abortus bv. 9 str. C68]
 gi|297173603|gb|EFH32967.1| polysaccharide export outer membrane protein [Brucella abortus bv.
           5 str. B3196]
          Length = 415

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 77/221 (34%), Gaps = 14/221 (6%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+     +    + ++  +    R   + E    DF     +       +  + 
Sbjct: 151 VTAGMQLI--SAQQEYADLQMQITAQTIRRARFEAELKGTDFTYAVPEQ-----TAANKD 203

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++            +F+   +++    +    +  S       L+    L    +   Q+
Sbjct: 204 MVALTRHMVEGERTLFDMRRNNLAAERRALEAQAASYGDEITTLQQSIKLHDTEIQLLQE 263

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDE 250
           ++   K+L ++   +++ L   ER +  +  +       L      Q  + + I  L + 
Sbjct: 264 NVNSSKSLVDRGLAAKSSLRDMERDLSSTRRDALELASFLARARQNQLAVEQRIANLDET 323

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              E A+ L+EI  ++ + QR    ++  +  + K+  Q +
Sbjct: 324 RRSEAASSLQEIDLNMARMQRRSNSQLEAMAEIAKSSGQIS 364


>gi|213968345|ref|ZP_03396489.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato T1]
 gi|301383476|ref|ZP_07231894.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063275|ref|ZP_07254816.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato K40]
 gi|213926983|gb|EEB60534.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato T1]
          Length = 388

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 52/140 (37%), Gaps = 5/140 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V  G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVREGQQVKAGELLATLDDRSIRASLEQTRAQL 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +D   + LD    +    +     +       L +  +  ++     I++    
Sbjct: 114 AQSKAQLDV--AQLDLKRYRQLTEDNGISRQTFDQQQALVRQLAATAQGNEASINAAQVQ 171

Query: 164 LKMKLTRMRSIYLNRLDLEN 183
           L    T++RS    R+ + N
Sbjct: 172 LS--YTQIRSPVTGRVGIRN 189



 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 40/127 (31%), Gaps = 17/127 (13%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L  +       +   E +       +R ++ + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVREG----QQVKAGELLATLDDRSIRASLEQTRAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q   T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTEDNGISRQTFDQQQALVRQLAATAQGNEASINAAQVQLSYTQIR 178

Query: 294 SPIAGTI 300
           SP+ G +
Sbjct: 179 SPVTGRV 185


>gi|33861695|ref|NP_893256.1| membrane fusion protein [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|33640063|emb|CAE19598.1| possible membrane fusion protein [Prochlorococcus marinus subsp.
           pastoris str. CCMP1986]
          Length = 353

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 48/227 (21%), Positives = 94/227 (41%), Gaps = 26/227 (11%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + + E+  V + DL ++ +I+     E  + I++ + +  ++ +   E  L      KE 
Sbjct: 74  QGILEEIKVEEGDLVEKGQILATLDDE--DFIYKLEELELNLKKQKSEY-LRREFLFKEG 130

Query: 263 S---RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +    D E  +  +    +K +  +  ++  +I +P  G I   +     +Y   S  L 
Sbjct: 131 AVSKEDYESYKNKYNTSEAKFSDAKAEKDFYSIRAPYPGKITA-KYAEIGSYVTPSSNLS 189

Query: 320 K-------IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                   I   S+   I AKV    I  +K G  A+VR   Y   + +   AI++KI  
Sbjct: 190 SNSKAKNFIFELSEGLEIIAKVPESDIGRIKTGQEASVRIEAYPSNKYR---AIVKKIAE 246

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              + +N       +EV LK  +++      E++ G  A++ F  K+
Sbjct: 247 RAVKDNNVTS----FEVTLKFKEIS-----EEIKIGMTADLEFKVKS 284



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 92/231 (39%), Gaps = 15/231 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  S+++SGE+        I     GI+++ +VE G  + +G  L T +D +    ++  
Sbjct: 51  LSESINTSGEVK-ATRTSNIGPRKQGILEEIKVEEGDLVEKGQILATLDDEDFIYKLEEL 109

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++++K  +          +FL  +  V ++ +ES + +      K+    ++   Y I +
Sbjct: 110 ELNLKKQKSEYLRR----EFLFKEGAVSKEDYESYKNKYNTSEAKFSDAKAEKDFYSIRA 165

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            Y        ++ + Y         SS L +   +      + + L     V ++D+ + 
Sbjct: 166 PYPG------KITAKYAEIGSYVTPSSNLSSNSKAKNFIFELSEGLEIIAKVPESDIGRI 219

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDE----ANLEFANYLKEISRDL 266
           +     S        ++ + +++ I E   +     + E     KEIS ++
Sbjct: 220 KTGQEASVRIEAYPSNKYRAIVKKIAERAVKDNNVTSFEVTLKFKEISEEI 270


>gi|170768939|ref|ZP_02903392.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia albertii TW07627]
 gi|170122011|gb|EDS90942.1| transporter auxiliary protein, membrane fusion protein (MFP) family
           [Escherichia albertii TW07627]
          Length = 331

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQALATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +      K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGREVLL---YTDGRPNKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 83/304 (27%), Gaps = 45/304 (14%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSA 116
            G ++   V+ G  I  G  L   +        ++    + + +     +      E+ A
Sbjct: 51  GGRVESLAVDEGDTIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRDEEIA 110

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                 K       +          L K  +  +       SS  ++L    +    +  
Sbjct: 111 QAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQALATLKSAQDKLRQ 170

Query: 177 NRLDLENK--SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            R     +  +    +L  +  +      NL +   ++ +D     R V   T+      
Sbjct: 171 YRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGT 230

Query: 235 HEQKNMLRHI--NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               ++ R +      DE NL+ A   +E+                   +    R  K  
Sbjct: 231 VFTVSLTRPVWVRAYVDERNLDQAQPGREVL------------------LYTDGRPNK-- 270

Query: 293 LSPIAGTIVYNQ---SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ-HVKKGYTA 348
             P  G I +      F+                       R ++        +++G   
Sbjct: 271 --PYHGQIGFVSPTAEFTPKTVETPD--------LRTDLVYRLRIVVTDADDALRQGMPV 320

Query: 349 TVRF 352
           TV+F
Sbjct: 321 TVQF 324


>gi|17989138|ref|NP_541771.1| multidrug resistance efflux pump [Brucella melitensis bv. 1 str.
           16M]
 gi|17984988|gb|AAL54035.1| multidrug resistance efflux pump [Brucella melitensis bv. 1 str.
           16M]
          Length = 325

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 86/280 (30%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 53  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 112

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++        +    + +       +       D+A    A   +++   +   + 
Sbjct: 113 NTVRVDALLPRGVTT----QSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 168

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 169 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVPAVK-- 225

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I A     Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 226 WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 282

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 283 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 322


>gi|159898126|ref|YP_001544373.1| RND family efflux transporter MFP subunit [Herpetosiphon
           aurantiacus ATCC 23779]
 gi|159891165|gb|ABX04245.1| efflux transporter, RND family, MFP subunit [Herpetosiphon
           aurantiacus ATCC 23779]
          Length = 641

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 73/232 (31%), Gaps = 24/232 (10%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIET 92
             +  SV  SG I  +      +S       +GI+    V  G Q++ G  L   +D   
Sbjct: 52  GRLVSSVLGSGTINPK------QSLDLTFQTTGIVSTVLVSEGQQVVAGQMLAELDDRNL 105

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +   + ++++ +  +   +      N + + L  +  S +    +         +  
Sbjct: 106 ALSVLSAEANLQSAQARLRQTQEG----NARPEDLAASQASVDNAKANLQKTVTGNATAA 161

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                 +   + + +L + ++      DL N  + +R+  +         K         
Sbjct: 162 DIASAQASVANAEAQLRKAKNGTATPADLANAEASVRSAQAKLDDLRAGPKP-------- 213

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
              ++  +  + ++   L +   +        +   D A     N    +S+
Sbjct: 214 -EKVSSAQATLDQAKSSLEQVKSDASKAKNQASLDRDTAANAVRNAQTSLSQ 264



 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/303 (11%), Positives = 84/303 (27%), Gaps = 23/303 (7%)

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               D    A    ++          +  + V   G+       K++   ++   + +  
Sbjct: 286 QTDVDRYNNAVRDEQDAQTKLDAAQLAYDNAVTQEGLDIANAEAKVRDAEVQLQTVLKGA 345

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-NIHEQKN 239
              + +   A L   + +L  +K        + +D+   +  + ++   LR+        
Sbjct: 346 TALEITQAEAALDQAKANLDKLKQ-----GGTADDVAAAQANLDQAKANLRKLTQGGTAA 400

Query: 240 MLRHINELYDEANLEFANYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +       D+A              DL   +   +     L   +  R+  T+ +P AG
Sbjct: 401 DVAAARANVDQAEANLDKLTAPPTDTDLAIQEAAVSQSEQSLKQAQLQRDNATLRAPFAG 460

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            I              S  +M I+      Y+   ++   +  V       +        
Sbjct: 461 VITSVSIVPGG---PSSGAVMHIL-DRSGLYVELNLSETDVALVTLNQKVELTIDALDAW 516

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                +  +  I P+    +  +     Y V + +       N+  ++ G          
Sbjct: 517 SA---EGTVSYISPVAEVSNGVVI----YRVKISVPS-----NDPMVKVGMTVNTNIILS 564

Query: 419 NTT 421
             +
Sbjct: 565 EKS 567


>gi|22002527|gb|AAM82678.1| DevB [Synechococcus elongatus PCC 7942]
          Length = 369

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 96/297 (32%), Gaps = 25/297 (8%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +   +S           +E+     E Q+L  L       +       +    +  + 
Sbjct: 76  SSLTAPQSGFSQARIADLRVEEGDRVSEGQILAVLDNQPELAAAAAAANSAVAVATADLN 135

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
                +   +R   + + + ++A L+  Q++    + LF+  A++   L+ +   V +  
Sbjct: 136 RILAGAKSTDRQTQQQQINRIQAELAIAQREYDRNQALFQSGAIAATALDSKRLDVERLQ 195

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            EL       ++ L  ++E   E              +++  Q   A   ++        
Sbjct: 196 GEL----AVARSTLASLSEAQPE--------------EVQLAQARLAQARAQAQEAAAQL 237

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               I +P AG +   +  S    +     ++++   +    + A+V    +  ++ G  
Sbjct: 238 ANTVIRAPFAGQV--LRVNSRPGESGSDDGVIELA-RTDRMQVVAEVYETDVGRIRVGQP 294

Query: 348 ATVRFPH--YADIREKKFKAIIEKID--PIISQQDNNLQTQEYYEVILKITDLAFSD 400
            T+   H  ++     +   I  KID   + S    +       EV + +       
Sbjct: 295 VTITSEHGGFSGSLTGRVALIGGKIDKKGVFSTDPASDIDSRVVEVRIDLDPSDRQK 351


>gi|326390133|ref|ZP_08211694.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325993781|gb|EGD52212.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 393

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 89/254 (35%), Gaps = 32/254 (12%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           + + L   DL  +  + +  L   Q  L  +K L EK +       Q         L   
Sbjct: 90  KLLELETQDLSIQYQIAQKQLEMAQMQLDALKKLKEKQSQQSQVAAQIPNTSLPQQLPSG 149

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E+  +Q +           + ++ ++   +    L+Q Q   A+   K       ++QK 
Sbjct: 150 ESTVQQPST----------SQIQTSSLSLDDQIKLQQKQVEIAELNLKNIKQNMYKQQKY 199

Query: 292 ILSPIAGTI-----VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           +++   GT+       N  F+SS +   +  +  +        I   V P    ++K+G 
Sbjct: 200 VIAEFDGTVTIVNAKDNSYFTSSQF--PAIAVEDL----NNLQIALDVNPYDAVNLKEGQ 253

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            A + F        K F+ ++ K+ P  ++           +V +        +N+  ++
Sbjct: 254 KAYIHFAD------KTFEGVVSKVSPTATKVITQTGGDNVVKVYVD-----LLNNDGTIK 302

Query: 407 NGFPAEVLFTAKNT 420
            GF  +V       
Sbjct: 303 PGFNVDVDIKIGEK 316



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 64/185 (34%), Gaps = 23/185 (12%)

Query: 20  MTLLSIIGIIGLITWS---------ILLPIEISVSSSGEIL--------NEDNVVE---I 59
           + +L I+ I+    ++           + +  +    G+I+         E    +   I
Sbjct: 9   LIVLVILAIVASTVYAISIKNKNSASTVEVNAAKVEKGDIVSLFSTTGVVESKSKQEYYI 68

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
            SP    + K  V  G  + +G  LL  E  + +    + +  ++  +  +D  K   + 
Sbjct: 69  LSPT--KVLKVYVSVGDNVKKGDKLLELETQDLSIQYQIAQKQLEMAQMQLDALKKLKEK 126

Query: 120 LNNKYDVLEK-AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            + +  V  +    S  +QL           +        S+   +K++  ++    LN 
Sbjct: 127 QSQQSQVAAQIPNTSLPQQLPSGESTVQQPSTSQIQTSSLSLDDQIKLQQKQVEIAELNL 186

Query: 179 LDLEN 183
            +++ 
Sbjct: 187 KNIKQ 191


>gi|260903445|ref|ZP_05911840.1| membrane-fusion protein [Vibrio parahaemolyticus AQ4037]
 gi|308106586|gb|EFO44126.1| membrane-fusion protein [Vibrio parahaemolyticus AQ4037]
          Length = 371

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 71/209 (33%), Gaps = 18/209 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +++  L +Q +++        ++  ++   +  + E    A     +   +        +
Sbjct: 97  INKGQLVKQGQVIANIDKRDLDSQLKRAQAMLRVKEKEFNAAKSLKSRGLQGEVAFATAE 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               D  + L  ++   +   + +P  G IV +      ++     P+  ++   +   I
Sbjct: 157 AALVDARANLNNVQTAVKNTEVKAPFDG-IVDHHFVEVGDFVGVGDPIATVI-DLETLVI 214

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A V+ + IQ++K+G  A VR      I  +     +  I  + S   N           
Sbjct: 215 EADVSERHIQYLKEGLQADVR-----TINGQHHLGTLRYIGRVSSVSTNTF--------- 260

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               ++   + N  +  G  AEV      
Sbjct: 261 --PIEIEIDNRNSLIPAGISAEVQLPLNE 287



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    +  G  + QG  +   +       +D +    + +    + E +A   L ++ 
Sbjct: 90  GKIVSLNINKGQLVKQGQVIANID----KRDLDSQLKRAQAMLRVKEKEFNAAKSLKSRG 145

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
              E AF + E  L+D     ++  + V N  + + +  +
Sbjct: 146 LQGEVAFATAEAALVDARANLNNVQTAVKNTEVKAPFDGI 185


>gi|242279149|ref|YP_002991278.1| hypothetical protein Desal_1677 [Desulfovibrio salexigens DSM 2638]
 gi|242122043|gb|ACS79739.1| hypothetical protein Desal_1677 [Desulfovibrio salexigens DSM 2638]
          Length = 451

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 71/152 (46%), Gaps = 6/152 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R    S +R  + +++ +  L++W     + + V +  EI+ E +   + +P SG++ + 
Sbjct: 173 RGKFFSWRRFLVATVVLLAVLLSW----RVPLRVVAPCEIIPE-DPFIVTAPLSGVVSEV 227

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-RCHIDTEKSALDFLNNKYDVLEK 129
            VE+G Q+  G+ L  ++       + + +  +K L R  ++TE  ALD    K ++   
Sbjct: 228 LVESGDQVKAGSLLFDYDPRVVMQELKIAQQQVKTLQRTLMNTELKALDSSKAKAELSIL 287

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
             +  +E++   + +Y ++   V      S+ 
Sbjct: 288 ECQLEQERIRLKVSEYRASLLDVRAEVNGSII 319


>gi|188591818|ref|YP_001796417.1| Cobalt-zinc-cadmium resistance, Cation efflux system [Cupriavidus
           taiwanensis]
 gi|170939213|emb|CAP64256.1| Cobalt-zinc-cadmium resistance, Cation efflux system [Cupriavidus
           taiwanensis LMG 19424]
          Length = 526

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/374 (12%), Positives = 112/374 (29%), Gaps = 45/374 (12%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN----- 121
           I+    E+G         L          I  K ++          E  AL F+      
Sbjct: 98  IETLLAEDGD-----DARLRLWGTRKDKAIAAKDLAATGTLKRPTGETEALAFVAKDGYL 152

Query: 122 -----------NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                       + D++ +A  ++    L+                  ++  +   ++  
Sbjct: 153 ESTTAIGEPHVFQADIVVRAAGAQLTVALNKDEDVVRLSESQLKSSNVAIQAAGPAQIAS 212

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLE 229
                      E++++ +   L+   + +   +    +K  V     + Q        L 
Sbjct: 213 TLQFPGEIRFNEDRTAHVVPRLAGVAEAVPASLGQTVKKGEVLAVIASTQLSEQRSELLA 272

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI-----LE 284
            ++ +   K   +   +L++E      +YL +    L++ +    +   KL+        
Sbjct: 273 AQQRLALAKTTYQREKKLWEERISAEQDYL-QARTALQEAEIAVRNAGQKLSAIGASAAS 331

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           K   +  + +P  G IV     +     ++   +  I       +    ++PK + +V+ 
Sbjct: 332 KGLNRFELRAPFDGVIVEKHL-ALGEAVKEDANVFTIS-DLSTVWAEFVISPKDLGNVRV 389

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G   T+    + +    K +  +  +  ++ +Q             + + +         
Sbjct: 390 GEQVTISSTAFEE----KAQGKVSYVGALLGEQTRTA------RARVTLNNPKMGW---- 435

Query: 405 LRNGFPAEVLFTAK 418
            R G    V  TA 
Sbjct: 436 -RPGLFVTVSLTAG 448



 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 43/150 (28%), Gaps = 14/150 (9%)

Query: 35  SILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +    I  ++   GEI   ++    +    +G+ +      G  + +G  L      +  
Sbjct: 205 AGPAQIASTLQFPGEIRFNEDRTAHVVPRLAGVAEAVPASLGQTVKKGEVLAVIASTQ-- 262

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                    +   R  +   +  L      Y   +K +E R     D+L    +      
Sbjct: 263 ---------LSEQRSELLAAQQRLALAKTTYQREKKLWEERISAEQDYLQARTALQEAEI 313

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +    S        + +  NR +L  
Sbjct: 314 AVRNAGQKLSAIGASAASKGL--NRFELRA 341


>gi|189426156|ref|YP_001953333.1| secretion protein HlyD [Geobacter lovleyi SZ]
 gi|189422415|gb|ACD96813.1| secretion protein HlyD family protein [Geobacter lovleyi SZ]
          Length = 355

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/352 (12%), Positives = 100/352 (28%), Gaps = 78/352 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K+  V+ G Q+  G  +   ED E  D    +    +  +  +   ++         
Sbjct: 80  GRLKERLVDEGQQVRAGQVVARLEDDELKDERLARAADQQAAQAVLADLRAG-------- 131

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                   SR+E++           ++       +V                        
Sbjct: 132 --------SRQEEIAATAATLARLKAESERAAQDAVRA---------------------- 161

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                             + LF K  + + +L+    +   +   +RE     +      
Sbjct: 162 ------------------EALFRKEVIPRKELDAARAVRDAAAAAVREAEQRLQLAKAGP 203

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                 A             +     R+ AD             Q  + +P+ GT++   
Sbjct: 204 RPDAVRA--------ARARLEGATASRSLADIR---------LSQAVLAAPLNGTVLAKH 246

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +           P++  V      ++RA +   Q+  +K G   +V    +        +
Sbjct: 247 A-EPGELLAAGSPVIT-VARLDEVWVRAFLPEPQLGKIKLGQQVSVSSDTWKGRTY---Q 301

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             +  I         N+QT+     ++    +  ++   EL+ G P + + T
Sbjct: 302 GTVSFIASEAEFTPRNVQTEAERVKLVYRIKVTIANPKQELKPGMPVDAVIT 353


>gi|302670961|ref|YP_003830921.1| RND family transporter [Butyrivibrio proteoclasticus B316]
 gi|302395434|gb|ADL34339.1| transporter RND family [Butyrivibrio proteoclasticus B316]
          Length = 531

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 105/301 (34%), Gaps = 24/301 (7%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+ GS +  G  L   ED E+ +L   ++  ++ L    +    + D  ++    
Sbjct: 100 VSGVAVKEGSHVEIGDVLFYLEDKESEELKTAREN-LEKLELAYEQSLFSGDVPDDVISK 158

Query: 127 LEK----AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL-DL 181
           +      ++++ + QL     +Y +  +       +  Y +      +    Y     + 
Sbjct: 159 VRSGNTTSYDTYQIQLKAVNDRYDAAKAVADAATKAVEYLTDLQNHDKNEIEYQTLTYNY 218

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE----- 236
           EN ++  +  L  +  D    + + +    ++ +    E    + T EL     +     
Sbjct: 219 ENANADYQKKLIDYTYDPNDTEAIEK----AKKEWTHIEDENKRETTELETYKSQVGIGY 274

Query: 237 -QKNMLRHINELYDEANLEFANYLKE-------ISRDLEQNQRTFADEMSKLTILEKTRE 288
            QK +    NE   +  LE A   K+       +   L   + +  ++  K+  LEK   
Sbjct: 275 DQKLIEAKANETAAKKELEKAEEEKDKQVKSINVEIALCDQRDSIKEQKEKIAQLEKESV 334

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             ++ +P+AG +      +S       + +  I    K       VT  Q Q +  G  A
Sbjct: 335 GASVKAPVAGIVSQVNK-ASGESISADETIAVIQIDGKDMTTSFSVTNAQAQKLHVGDAA 393

Query: 349 T 349
            
Sbjct: 394 R 394


>gi|300939829|ref|ZP_07154467.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 21-1]
 gi|300455361|gb|EFK18854.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 21-1]
          Length = 331

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  +   ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTHPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322


>gi|296156035|ref|ZP_06838874.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
 gi|295893541|gb|EFG73320.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
          Length = 393

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/354 (10%), Positives = 99/354 (27%), Gaps = 73/354 (20%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +    ++ ++ I+  + W          +       + N + +    SG + +  V +  
Sbjct: 57  IILAVVVILLAIVAFVWW--FATRNEITTDDAY--TDGNAITMAPKVSGYVVQLAVNDNV 112

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L+  +  +    +D  +  +   +  ++     LD    +Y    +  +++  
Sbjct: 113 YVHKGDLLVVIDKRDYQAQVDQAEAQVGLAKAQLNAALVQLDIARIQYPAQYRQAKAQT- 171

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                     S+    F    ++  R   +         ++  D + +S+      +  Q
Sbjct: 172 ----------SSAEANFRQAEAAYLRQHAVDQRATSQQNIDTADAQRQSASASVEQARAQ 221

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +    +                                      +R      +E   +  
Sbjct: 222 QQTASLVP----------------------------------QQIRQTEATVEERRQQV- 246

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              ++    LEQ Q   +                 + SP  G I          + Q   
Sbjct: 247 ---QQAEAQLEQAQLNLS--------------YCEVRSPSDGWITRRNV-QLGTFLQAGV 288

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
            L  IV  +   ++ A     Q++ ++ G    V    Y  +     +  ++ +
Sbjct: 289 SLFAIV--TPQVWVTANFKESQLERMRPGDKVKVEVDAYPKL---DLRGHVDSV 337


>gi|294508879|ref|YP_003572938.1| membrane fusion efflux protein, [Salinibacter ruber M8]
 gi|294345208|emb|CBH25986.1| membrane fusion efflux protein, putative [Salinibacter ruber M8]
          Length = 454

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 75/280 (26%), Gaps = 7/280 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   V++ G    E  V EI    SG I +  V+ G  + QG  L   +  +    ++  
Sbjct: 54  ITEVVTAFGRAQPEVEV-EISPDVSGEIVELPVKEGDVVQQGDLLARLKADDYRAAVERA 112

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +   +  +   ++        YD  +K +E       DF     +    V     + 
Sbjct: 113 EAGVSEAKATLAQRRADSVQARRTYDRQKKLYEKEVVSASDFEDAKSTYEQAVAQLQAAR 172

Query: 160 VY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               S +  L   R            S  L  L     + +   +       +  + L Q
Sbjct: 173 FRVESARADLQDAREQLQKTRIYAPMSGTLTRLEVEEGERVVGTQQRAGTEMMRVSRLGQ 232

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E  V  +  ++          +                         E +Q    +   
Sbjct: 233 MELEVDVNESDVVNVASRDSATIEFDAHPDRSFQGAVTEIANSARIQNEGSQNEVTNFPV 292

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSN---YAQQS 315
            + +L+       + S   G I   +           +  
Sbjct: 293 TIRVLDNP--NTGLTSGDEGAIARPEVPREGARSPVIRPG 330



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 71/238 (29%), Gaps = 35/238 (14%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY---------LKEIS 263
           +  + + E  V ++   L +   +     R  +        E  +           ++  
Sbjct: 106 RAAVERAEAGVSEAKATLAQRRADSVQARRTYDRQKKLYEKEVVSASDFEDAKSTYEQAV 165

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA----QQSQPLM 319
             L+  +       + L    +  ++  I +P++GT+   +            +    +M
Sbjct: 166 AQLQAARFRVESARADLQDAREQLQKTRIYAPMSGTLTRLEVEEGERVVGTQQRAGTEMM 225

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           + V       +   V    + +V    +AT+ F  + D   +     I     I ++   
Sbjct: 226 R-VSRLGQMELEVDVNESDVVNVASRDSATIEFDAHPDRSFQGAVTEIANSARIQNEGSQ 284

Query: 380 NLQTQEYYEVILKI-----------TDLAFSDNNIE--------LRNGFPAEVLFTAK 418
           N  T   + V +++            + A +   +         +R G    V    +
Sbjct: 285 NEVTN--FPVTIRVLDNPNTGLTSGDEGAIARPEVPREGARSPVIRPGMSGAVDIYTE 340


>gi|218782687|ref|YP_002434005.1| efflux transporter, RND family, MFP subunit [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764071|gb|ACL06537.1| efflux transporter, RND family, MFP subunit [Desulfatibacillum
           alkenivorans AK-01]
          Length = 402

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 16/162 (9%)

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A        + E    +     + L   +       I SPI GT++  ++         S
Sbjct: 144 AQEFLTYETEKETAAASVLSSQAALDTAKTNLRNAVIKSPIDGTVIE-RAIEEGQTVAAS 202

Query: 316 ---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                L  I        I A V    I  +++G         Y D +   F   + +I  
Sbjct: 203 YSTPTLFLIAEDLSDMQIEAAVDESDIGQIREGQPVRFTVQAYPDDQ---FTGTVLQI-R 258

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           +  +  +N+ T   Y V+++       +    L  G  A + 
Sbjct: 259 LNPEVVSNVVT---YTVVIEAP-----NETGTLLPGMTATID 292


>gi|119899425|ref|YP_934638.1| membrane fusion protein [Azoarcus sp. BH72]
 gi|119671838|emb|CAL95752.1| membrane fusion protein [Azoarcus sp. BH72]
          Length = 365

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 61/199 (30%), Gaps = 16/199 (8%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
           ++ +    L+    +Q N    + E       +            ++         +   
Sbjct: 99  VLVELDAALQSAELQQANAALQLAEADHRRAEDLFARKFVSQSARDEAASRLEVARAGRA 158

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           + +   E+  I +P  G ++  +  S  +Y ++ + L+ I        +  ++    +Q 
Sbjct: 159 LAQARFERTRIRAPFDG-VLGIRRVSVGDYIKEGEVLVNI-EDIDTLKVDFRLPETYLQR 216

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           ++      V        R   F A ++ IDP++  Q               +      + 
Sbjct: 217 IRPAQVLEVSSDALPGER---FSARVDAIDPLVDAQG-----------RAVVMRARLPNA 262

Query: 402 NIELRNGFPAEVLFTAKNT 420
              LR G  A V    +  
Sbjct: 263 EGRLRPGMFARVRLILQER 281



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 50/162 (30%), Gaps = 4/162 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS+ G +   +  V ++   +G I +     G  + +GT L+  +    +  +     ++
Sbjct: 61  VSAVGTL-VSNESVILRPEVAGRIARIHFREGMPVARGTVLVELDAALQSAELQQANAAL 119

Query: 104 KNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +         +   +      +  D      E           ++  T  +    G+  +
Sbjct: 120 QLAEADHRRAEDLFARKFVSQSARDEAASRLEVARAGRALAQARFERTRIRAPFDGVLGI 179

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            R       +   + +N  D++      R   +  Q+     
Sbjct: 180 RRVSVGDYIKEGEVLVNIEDIDTLKVDFRLPETYLQRIRPAQ 221


>gi|242279807|ref|YP_002991936.1| secretion protein HlyD family protein [Desulfovibrio salexigens DSM
           2638]
 gi|242122701|gb|ACS80397.1| secretion protein HlyD family protein [Desulfovibrio salexigens DSM
           2638]
          Length = 344

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 54/368 (14%), Positives = 104/368 (28%), Gaps = 80/368 (21%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E   V + SP  G + +  V  G  ++ G PL T                        +
Sbjct: 35  VEGEFVYVSSPLGGQLDEISVRKGQTVVTGQPLFTL---------------------ERE 73

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            EKS +D      D                  +  S  +        S   S+K +L   
Sbjct: 74  FEKSGVDEAEGNLD------------------RTISDLADKRKGRRPSEIASIKARL--- 112

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                                    +     + L       + DL     I  +   + R
Sbjct: 113 -------------------------RKAVAAERLAATEYKRRADLYSTRTISEEERDQAR 147

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +  +   +++ I      A L           ++   + +     +KL       +QK 
Sbjct: 148 TDYEQATQLVKEIKSELKTATLGSRTD------EINAAESSVRAAQAKLEQARWNYDQKA 201

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
             +P +G +     +    +    +P++ I+P      +R  V  + +   K G    V 
Sbjct: 202 QSAPRSGLVFDTIRY-EGEWVAAGKPIISILPPENR-KVRFYVPEQIVGSFKIGEKLLVN 259

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNL-QTQEYYEVILKITDLAFSDNNIELRNGFP 410
           F   A    K     +  I          +  +Q   +++  +  +   D  +  + G P
Sbjct: 260 FDGLA----KPIPVTLSYISAQAEYTPPVIYSSQSRAKLVFMLEAVPAEDKAVLFKPGQP 315

Query: 411 AEVLFTAK 418
            +V  TA 
Sbjct: 316 VDVSRTAG 323


>gi|167043440|gb|ABZ08142.1| putative HlyD family secretion protein [uncultured marine
           microorganism HF4000_APKG1C9]
          Length = 502

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 49/195 (25%), Gaps = 39/195 (20%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-------TILSPIAGTIVYN 303
           A  E+   L      L Q  R     +        +  +        T+ +P  G I   
Sbjct: 178 AQQEYLAVLNSGDEQLAQAMRERMRLLGMSNGQISSVGRTGRAQATITVTAPTGGAITML 237

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                       Q L +I       ++ A V   Q  +++ G   +     + D R   F
Sbjct: 238 GVR-PGMTVMAGQTLAEIT-GFSPIWLEASVPETQAANIRVGQPVSATLTAFPDER---F 292

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF-------------- 409
              I  I P        +                  + +  L+ G               
Sbjct: 293 SGPIIAILPSAQDASRTITV-----------RAQLPNPSGRLKPGMFAQVSLTPDTRRAL 341

Query: 410 --PAEVLFTAKNTTL 422
             P+E +      T+
Sbjct: 342 LVPSEAVIRTGRRTI 356


>gi|302037487|ref|YP_003797809.1| putative multidrug efflux transporter membrane fusion protein
           [Candidatus Nitrospira defluvii]
 gi|300605551|emb|CBK41884.1| putative Multidrug efflux transporter, membrane fusion protein
           [Candidatus Nitrospira defluvii]
          Length = 359

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 89/263 (33%), Gaps = 22/263 (8%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-----LFEKNAVSQNDLN 217
            +   L    ++ L ++  E     ++A+ S    +  M++      L +        + 
Sbjct: 35  EVTGSLPEATTVVLAQVTTEAIRHTIKAVGSLRANESIMIRPEIAGRLRQVWFQEGQAVE 94

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + + +V     EL+  + +    L+     Y+       +  + +++             
Sbjct: 95  KDQLLVEMDDSELQAELTQAAAQLKVSRLTYERLKQLDLDGKRYVTKQQLDEAAGALQVS 154

Query: 278 SKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                L  TR  KT I +P AG +   +  S  ++    + L+ +        I  KV  
Sbjct: 155 QANHALYATRSAKTKIRAPFAG-MTGIRRVSPGDFVGVGRDLVNL-EDLDTLKIDFKVPE 212

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             ++H+  G +  +    Y       F   +  IDP +     ++Q      V  +I   
Sbjct: 213 TLLRHLAPGQSIDLTTDAYPGDT---FHGTVYVIDPQVDMSTRSVQ------VRARIP-- 261

Query: 397 AFSDNNIELRNGFPAEVLFTAKN 419
              +    LR G  A+VL T   
Sbjct: 262 ---NPQQRLRPGMFAQVLLTFGQ 281



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/180 (11%), Positives = 58/180 (32%), Gaps = 28/180 (15%)

Query: 13  HPASLKRMTLLSIIGIIGLIT--WSILLPI----------EISVSSSGEILNEDNVVEIK 60
            P     + + +++ +  ++   W++L P+          E +     ++  E     IK
Sbjct: 2   TPRRTTYLIIFTLLALSAMLAVKWTVLTPVPASEVTGSLPEATTVVLAQVTTEAIRHTIK 61

Query: 61  SPFS--------------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +  S              G +++   + G  + +   L+  +D E    +      +K  
Sbjct: 62  AVGSLRANESIMIRPEIAGRLRQVWFQEGQAVEKDQLLVEMDDSELQAELTQAAAQLK-- 119

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              +  E+     L+ K  V ++  +     L      +    ++     I + +  +  
Sbjct: 120 VSRLTYERLKQLDLDGKRYVTKQQLDEAAGALQVSQANHALYATRSAKTKIRAPFAGMTG 179


>gi|296533972|ref|ZP_06896490.1| HlyD family secretion protein [Roseomonas cervicalis ATCC 49957]
 gi|296265703|gb|EFH11810.1| HlyD family secretion protein [Roseomonas cervicalis ATCC 49957]
          Length = 287

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 63/213 (29%), Gaps = 28/213 (13%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L Q E +V   T  L     +++   R       +A +      ++   D      +  +
Sbjct: 87  LQQAEAVVESRTASLERARRDERRYDR------LDAGIVSQQRQEQAHSDAATAAASLQE 140

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             +   +      +  I +P AGTI          Y      +M +V  +   +++    
Sbjct: 141 AEAARELARLNLARTEIRAPAAGTITNLTLR-PGAYVSAGSAVMALV-DAGSLHVQGYFE 198

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL-------------Q 382
             ++  +  G    V          +     +E I   I  ++ +              +
Sbjct: 199 ETKLARIHPGDPVRVTL----MGDGRVLSGHVESIAGGIEDRERSAGLVANVNPTFSWVR 254

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +   V +K+  +      + L  G  A V  
Sbjct: 255 LAQRVPVRVKLDAV---PEGLRLIPGRTATVSV 284



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 41/110 (37%), Gaps = 5/110 (4%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V++ + + QG PL   +       +   +  +++    ++  +        +
Sbjct: 55  SGFVAEVLVQDNAVVAQGQPLFRLDQARFALALQQAEAVVESRTASLERARRD----ERR 110

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           YD L+    S++ Q         +  S         + R L +  T +R+
Sbjct: 111 YDRLDAGIVSQQRQEQAHSDAATAAASLQEAEAARELAR-LNLARTEIRA 159


>gi|251772550|gb|EES53116.1| Secretion protein (HlyD) [Leptospirillum ferrodiazotrophum]
          Length = 302

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 81/237 (34%), Gaps = 14/237 (5%)

Query: 188 LRALLSSHQKDLTMMKNLFEKNA-------VSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LR + ++      + K LF + A       ++  D  + +  V   T  L  +  ++ + 
Sbjct: 46  LREVQAAFHDTGRIEKLLFVEGASVHAGELIALMDPVRYQDQVDADTQALLHDTAQEIDA 105

Query: 241 LRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +  + +      +F    +  +    L+  +     ++++     +      + +P+ G
Sbjct: 106 QKTWDRVKRLTRADFNTRQQKDDARAALDMAKAQIQKDVAQKAYDLRQLNDTRLYAPVDG 165

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   +     + A    P+  +   ++  + R  +   ++  V +G  A V    Y   
Sbjct: 166 IVQT-RILEPGDMAFPQTPVYTLA-RTRPLWARVYLEEPELGRVHEGMPAIVTSDSYPHE 223

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               F   +  I P        +QT     +++    +  S    +LR G P  V  
Sbjct: 224 ---SFVGYLGYISPSSEFTPKEVQTVHQRTILVYRARVYLSCPTRKLRLGMPVTVTI 277



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 71/205 (34%), Gaps = 9/205 (4%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV--VEIKSP--FSGIIKKFQVE 73
           + + L+ ++ + G   W++ L           ++   N+   E+++    +G I+K    
Sbjct: 7   RLVALIVLLAVAGGAFWALRLRKADETPKD-RLVLYGNIDLREVQAAFHDTGRIEKLLFV 65

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G+ +  G  +   + +   D +D    ++ +        +   D +      L +A  +
Sbjct: 66  EGASVHAGELIALMDPVRYQDQVDADTQALLHDTAQEIDAQKTWDRVK----RLTRADFN 121

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             +Q  D         +++        Y   ++  TR+ +     +          A   
Sbjct: 122 TRQQKDDARAALDMAKAQIQKDVAQKAYDLRQLNDTRLYAPVDGIVQTRILEPGDMAFPQ 181

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +    L   + L+ +  + + +L +
Sbjct: 182 TPVYTLARTRPLWARVYLEEPELGR 206


>gi|39934399|ref|NP_946675.1| FusE-MFP/HlyD family membrane fusion protein [Rhodopseudomonas
           palustris CGA009]
 gi|39648248|emb|CAE26768.1| putative FusE-MFP/HlyD family membrane fusion protein
           [Rhodopseudomonas palustris CGA009]
          Length = 313

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 65/215 (30%), Gaps = 22/215 (10%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q  L   E  V  +  +L     E +   R  +    +   +       ++         
Sbjct: 93  QIALASAEATVASARADLANKQAEAERRDRLSSLAVSKEEQQIYTAAAAMAA------AA 146

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +S L        +  I+SP+ G +       + +YA   Q  + IV  S   ++ A
Sbjct: 147 LRQALSNLDKARLALSRTEIVSPVDGYVTNL-VTQAGDYATSGQRALSIV-DSGSFWVDA 204

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL--QTQEYYE-- 388
                 ++ ++ G  A V    Y      +   I   I    ++ D +        +   
Sbjct: 205 YFEETLLRGIRVGDRARVALMAYPQTLAGEVVGIERGIAVPNAESDPSGLATVNPVFTWV 264

Query: 389 -------VILKITDLAFSDNNIELRNGFPAEVLFT 416
                  V + + D+     +I L  G  A V   
Sbjct: 265 RLAQRVPVRIALKDV---PPSIVLAAGLTATVSIQ 296



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
                VV +    SG I +  V+    + +G PL+  + ++    +   + ++ + R  +
Sbjct: 51  TVRAYVVGVTPQVSGRISELSVKAAQYVRKGDPLMKIDPVDFQIALASAEATVASARADL 110

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLL 139
             +++  +    + D L     S+EEQ +
Sbjct: 111 ANKQAEAE----RRDRLSSLAVSKEEQQI 135


>gi|254708603|ref|ZP_05170431.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261316110|ref|ZP_05955307.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261305136|gb|EEY08633.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M163/99/10]
          Length = 172

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 51/169 (30%), Gaps = 15/169 (8%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           +     +   +            +     ++ +P  G I  N S    +     Q +  +
Sbjct: 5   LEAQYNEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQKIAAL 63

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII------- 374
           VP     YI A     Q+ H+K G TA +        +   F   +  I P         
Sbjct: 64  VPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASGAVFSLL 119

Query: 375 -SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
             +      T+    V ++IT    +  + ++R G    V       T 
Sbjct: 120 PPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDT--RTA 166


>gi|254443225|ref|ZP_05056701.1| efflux transporter, RND family, MFP subunit, putative
           [Verrucomicrobiae bacterium DG1235]
 gi|198257533|gb|EDY81841.1| efflux transporter, RND family, MFP subunit, putative
           [Verrucomicrobiae bacterium DG1235]
          Length = 643

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 69/181 (38%), Gaps = 18/181 (9%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +L    EL      + ++ +   +R+  +      D+++ +    + ++   + +PI G
Sbjct: 172 ELLTAQRELLTSYRSDPSSSITAAAREKLRLWDLLPDQINAIIESGQAKDHFILRAPIGG 231

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKL-TYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
            +V  +     +Y +  + L +IV   +L  Y+ A  +   +  ++ G   +     +  
Sbjct: 232 VVVSKKVN-EGDYVKTGESLFRIVDLDELWLYLDAYES--DLAWLRYGQDVSFTVEAFPG 288

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                F   I  I+P +  +   +Q      V + +      +    L+ G  A+ L  A
Sbjct: 289 ET---FHGQIAFIEPEVDGKTRTVQ------VRVNVP-----NEGQRLKPGMFAKGLVKA 334

Query: 418 K 418
           +
Sbjct: 335 Q 335



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 16/80 (20%)

Query: 50  ILNEDNVV---EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           I+          +++P  G++   +V  G  +  G  L                V +  L
Sbjct: 213 IIESGQAKDHFILRAPIGGVVVSKKVNEGDYVKTGESLFRI-------------VDLDEL 259

Query: 107 RCHIDTEKSALDFLNNKYDV 126
             ++D  +S L +L    DV
Sbjct: 260 WLYLDAYESDLAWLRYGQDV 279


>gi|218710461|ref|YP_002418082.1| membrane-fusion protein AcrA [Vibrio splendidus LGP32]
 gi|218323480|emb|CAV19657.1| Membrane-fusion protein AcrA [Vibrio splendidus LGP32]
          Length = 374

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 67/207 (32%), Gaps = 21/207 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             + Q    + K  LE++    E+ + L  + +   +A         +        + + 
Sbjct: 102 VKVGQAIAQIDKGDLEIQ---LERASALYRLKQKEFKAAQSLKKRGLQGEIAYTTAEASL 158

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +  +     E   +   I SP +G +         ++     P+  ++       I A 
Sbjct: 159 TEAKAMKRNAELALKNTVITSPFSGVVQDLMV-ELGDFVGVGDPVAGVI-DLDPLVIEAD 216

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V+ + IQH+    +A VR         ++ +  +  +  I S   N              
Sbjct: 217 VSERHIQHLLVNQSALVRLLG-----REEAEGRLRYVSRISSASTNTF-----------P 260

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
            ++   +++  L  G  AEV    +  
Sbjct: 261 IEIEIDNSDGLLPAGVSAEVTLNLETR 287


>gi|150373004|dbj|BAF66268.1| multidrug efflux transporter VexE [Vibrio cholerae]
          Length = 366

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 73/212 (34%), Gaps = 23/212 (10%)

Query: 209 NAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +++  + + + +     + L    +   + +     +     E N   A   K +  +
Sbjct: 91  GRIAEVKIAKGQLVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALKNKGLQGE 150

Query: 266 LE--QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           +          D  S L+ +++  +   + +P  G +         ++     P+  I+ 
Sbjct: 151 VAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPI-EKGDFVGIGDPVASII- 208

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 I A V+ + IQHV+    A +RF     I   + +  +  I  + S   N    
Sbjct: 209 DLHKLVIEADVSERHIQHVQLEQAARIRF-----IDGTQTQGKVRYISRLSSLATNT--- 260

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              + + +++ +   +     +  G  AEV  
Sbjct: 261 ---FAIEVEVDNPQQA-----IPAGVSAEVEL 284



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I + ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIELYGRTAPDRQAK-IGAEIAGRIAEVKIAKGQLVTKNQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 127 AQLKVRQ----QEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 183 FDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLEQAA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGTQTQGKVRYISRL 253


>gi|126696666|ref|YP_001091552.1| membrane fusion protein [Prochlorococcus marinus str. MIT 9301]
 gi|126543709|gb|ABO17951.1| possible membrane fusion protein [Prochlorococcus marinus str. MIT
           9301]
          Length = 353

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 56/300 (18%), Positives = 108/300 (36%), Gaps = 35/300 (11%)

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +D+++K    R   +L  L  +    +  F    S       +++   + I  + ++   
Sbjct: 2   FDLIKKNINLRSGIILLSLAIFFVFITNSFKKNKSKDISDFVVQVE--KGILSDSINTSG 59

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQ---ERIVYKSTLELRENIHEQKN 239
           +    +      +K   + +   ++   V ++ +      E  +YK   EL  N+ +QK+
Sbjct: 60  EVKAKKTSNIGPRKQGVIKEIKVDEGDLVKKDQVLASLDDEDFIYKIE-ELELNVEKQKS 118

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                  LY E  +   +Y           +  +    +KL   +  +    I +P  G 
Sbjct: 119 EFLRREYLYQEGAVSKEDYESY--------KNNYDISSAKLNDAKAEKSFYLIKAPYGGK 170

Query: 300 IVYNQSFSSSNYAQQSQPLMK-------IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           I   +     +Y   S  L         I   S+   I AKV    I  +K G  A+VR 
Sbjct: 171 ITA-KYAEIGSYVTPSTNLSSDSKTKNFIFELSEGLEIVAKVPESDIGRIKIGQEASVRI 229

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             Y   +     AI++KI     + +N       +EV L   D++      E++ G  A+
Sbjct: 230 EAYPSKKY---SAIVKKIAARAVKDNNVTS----FEVTLNFKDIS-----EEIKIGMTAD 277



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 64/163 (39%), Gaps = 22/163 (13%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSI-----------LLPIEISVSSSGEILNE 53
           M+  +K+N       + LLS+      IT S            ++ +E  + S   I   
Sbjct: 1   MFDLIKKNINLRSG-IILLSLAIFFVFITNSFKKNKSKDISDFVVQVEKGILSD-SINTS 58

Query: 54  DNVVE-----IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
             V       I     G+IK+ +V+ G  + +   L + +D +    I+  +++++  + 
Sbjct: 59  GEVKAKKTSNIGPRKQGVIKEIKVDEGDLVKKDQVLASLDDEDFIYKIEELELNVEKQK- 117

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              +E    ++L  +  V ++ +ES +        K +   ++
Sbjct: 118 ---SEFLRREYLYQEGAVSKEDYESYKNNYDISSAKLNDAKAE 157


>gi|119386157|ref|YP_917212.1| RND family efflux transporter MFP subunit [Paracoccus denitrificans
           PD1222]
 gi|119376752|gb|ABL71516.1| efflux transporter, RND family, MFP subunit [Paracoccus
           denitrificans PD1222]
          Length = 401

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 104/321 (32%), Gaps = 59/321 (18%)

Query: 112 TEKSALD-FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            E+ +L+  +  +  +      +   Q+   + +      +    G          +   
Sbjct: 41  AERGSLEVSVLAEGRLKPSNLVAVGAQVSGRITELAVVLGQRVEQGDLIARIDSVQQANE 100

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +R+      +L+ + +  RA+L+  +K L   +NL   NA S++ ++  ++ V       
Sbjct: 101 LRTAQAALANLKAQMAERRAVLALAEKTLERQQNLIRSNAASRSTMDSAQQDV------- 153

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             ++   +           E  +E A                               +  
Sbjct: 154 --DVARAQIAALQAQIAQAEVAIEIART---------------------------DLDYT 184

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTA 348
            I +P+AGT++      +       Q    IV         + A+++   I  V+ G   
Sbjct: 185 RITAPMAGTVLAI-VSQAGQTVNAVQSSPTIVVLGQLDRMDVHAEISEADIGKVRPGQK- 242

Query: 349 TVRFPHYADIREKKFKAIIEKIDP-------IISQQ----DNNLQTQEYYEVILKITDLA 397
            VRF    D   + ++ +++ I P         + Q     ++     YY  I+ +    
Sbjct: 243 -VRFSLLDDS-GRSYEGVLDSIAPAPQSIVNDSAIQGGTGTDSSSGAIYYTGIVPV---- 296

Query: 398 FSDNNIELRNGFPAEVLFTAK 418
             + +  LR+   A+V     
Sbjct: 297 -ENPDGRLRSYMTAQVSIVLG 316



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 42/97 (43%), Gaps = 1/97 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E+SV + G +    N+V + +  SG I +  V  G ++ QG  +   + ++  + +   
Sbjct: 46  LEVSVLAEGRLKPS-NLVAVGAQVSGRITELAVVLGQRVEQGDLIARIDSVQQANELRTA 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           + ++ NL+  +   ++ L       +  +    S   
Sbjct: 105 QAALANLKAQMAERRAVLALAEKTLERQQNLIRSNAA 141


>gi|206562170|ref|YP_002232933.1| transporter system transport protein [Burkholderia cenocepacia
           J2315]
 gi|198038210|emb|CAR54163.1| transporter system transport protein [Burkholderia cenocepacia
           J2315]
          Length = 357

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/359 (11%), Positives = 92/359 (25%), Gaps = 79/359 (22%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V+ G  +  G PL   +              +  LR  +D  ++         
Sbjct: 58  GRVTAMLVDEGDFVSAGQPLARMD--------------VVVLRAQLDEAQA--------- 94

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                    RE+Q ++                      S+  ++ + RS       L  +
Sbjct: 95  ---------REQQAVNTAA-------------------SIDAQVAQRRSDKAAADALVVQ 126

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                + L +  + L   + L    A S  +L+            +     + +     I
Sbjct: 127 R---ESELDAATRRLARSETLSRDGASSLQELDDDRARAGSLRATVNAARAQVEAAQAGI 183

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +                    L   +       + +  ++       + SP  G + Y +
Sbjct: 184 DAT---------------RAQLVAARSAVTAAQATVARVQADISDSELTSPRDGRVQY-R 227

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
              S         ++ +V  S   Y+   +    +  V  G    +         E    
Sbjct: 228 IAESGEVLPAGGKVLNVVDLSD-VYMTFFLPETVVGRVPLGADVRIVLDA---APEYVIP 283

Query: 365 AIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           A +  +         + +    + +  + V  +I       +   ++ G P        
Sbjct: 284 ARVSYVSSTAQFTPKTVETATERQKLMFRVKARIDRDLLQRHLKLVKTGLPGVAWLKTD 342


>gi|254695505|ref|ZP_05157333.1| Polysaccharide export protein [Brucella abortus bv. 3 str. Tulya]
 gi|261215896|ref|ZP_05930177.1| polysaccharide biosynthesis/export protein [Brucella abortus bv. 3
           str. Tulya]
 gi|260917503|gb|EEX84364.1| polysaccharide biosynthesis/export protein [Brucella abortus bv. 3
           str. Tulya]
          Length = 415

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 77/221 (34%), Gaps = 14/221 (6%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+     +    + ++  +    R   + E    DF     +       +  + 
Sbjct: 151 VTAGMQLI--SAQQEYADLQMQITAQTIRRARFEAELKGTDFTYAVPEQ-----TAANKD 203

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++            +F+   +++    +    +  S       L+    L    +   Q+
Sbjct: 204 MVALTRHMVEGERTLFDMRRNNLAAERRALEAQAASYGDEITTLQQSIKLHDTEIQLLQE 263

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDE 250
           ++   K+L ++   +++ L   ER +  +  +       L      Q  + + I  L + 
Sbjct: 264 NVNSSKSLVDRGLAAKSSLRDMERDLSSTRRDALELASFLARARQNQLAVEQRIANLDET 323

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              E A+ L+EI  ++ + QR    ++  +  + K+  Q +
Sbjct: 324 RRNEAASSLQEIDLNMARMQRRSNSQLEAMAEIAKSSGQIS 364


>gi|78188024|ref|YP_378362.1| multidrug resistance protein A [Chlorobium chlorochromatii CaD3]
 gi|78170223|gb|ABB27319.1| multidrug resistance protein A [Chlorobium chlorochromatii CaD3]
          Length = 342

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 87/300 (29%), Gaps = 21/300 (7%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +E        ++   + +     +++   G + +      +L R+  +       +   S
Sbjct: 56  IEGDIYPVISRIAGKVAEVRVRDNQMVARGDTLLTLDRSDELVRLNMMAAELQSAQAAVS 115

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           + ++   +    ++  +    K        ++  +    S  E           ++   E
Sbjct: 116 VAQSQAEAAHAAVSAAEATNRKEQSDLQRYSKLLKQEVISPAEFDG--------VKARAE 167

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                 L   +  +    +L   Q       + L   E       + +P  G +      
Sbjct: 168 AAAAQLLALRSRYQAAQAELPLKQADALKRQATLQEAELKLSYTALTAPANGRVAKKNVH 227

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
               Y    Q L+ +V ++ L  + A     Q++H+       +    Y     K+F   
Sbjct: 228 -IGQYVAPGQQLIALVGNNDLWVV-ANFKETQLEHLVPNQAVIIEVDAYP---GKEFSGT 282

Query: 367 IEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAK 418
           IE +      +      +  +  + +V     +KI      D    L  G    V    K
Sbjct: 283 IESLSSGTGAKFALLPPDNASGNFVKVTQRVPVKILFTEKLDKRYPLAAGMNVTVAVKVK 342



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 55/152 (36%), Gaps = 3/152 (1%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E ++  + S  +G + + +V +   + +G  LLT +  +    +++    +++ +  +  
Sbjct: 57  EGDIYPVISRIAGKVAEVRVRDNQMVARGDTLLTLDRSDELVRLNMMAAELQSAQAAVSV 116

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            +S  +  +      E      +  L  +  L K        F+   +    +    L  
Sbjct: 117 AQSQAEAAHAAVSAAEATNRKEQSDLQRYSKLLKQEVISPAEFDGVKARAEAAAAQLLAL 176

Query: 171 MRSIYLNRLDL-ENKSSLLRALLSSHQKDLTM 201
                  + +L   ++  L+   +  + +L +
Sbjct: 177 RSRYQAAQAELPLKQADALKRQATLQEAELKL 208


>gi|30249850|ref|NP_841920.1| hypothetical protein NE1898 [Nitrosomonas europaea ATCC 19718]
 gi|30180887|emb|CAD85809.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
          Length = 381

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 65/208 (31%), Gaps = 18/208 (8%)

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQRTFADE 276
               + +S   L+         +   N   +     F     + E+   L+  +      
Sbjct: 96  LNAQLQQSEASLKSAQTALSVTINKANRSRNLIEKGFLSKEAMDEVKELLDSARAQVIVS 155

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVPHSKLTYIRAK 333
            +++   +   +   I SPI+G +V                +  L ++    K   I   
Sbjct: 156 QAQVARDQANLDYSIIRSPISGVVVARNVN-IGQTVAANFQTPTLFQVARDLKQMQINIS 214

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    I  +  G T       + D    +F AI+++I    + Q+N +     Y VI  +
Sbjct: 215 VAEADIGQIHTGQTMVFTVDAFQDR---EFSAIVKQIRLNPTVQENVVT----YNVIATV 267

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                 +    L  G  A V F     T
Sbjct: 268 -----INEEGTLLPGMTANVRFIVNEKT 290



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 64/176 (36%), Gaps = 23/176 (13%)

Query: 16  SLKRMTLLSIIGIIGLITWSILL------------------PIEISVSSSGEILNEDNVV 57
           S +R  +L +I +   + +                       I  ++S++G +     +V
Sbjct: 3   SSRRKIILFLIILFTSVIYGYFSLQGESGKIRYTTRAADQGDIVRTISANGTLTP-LELV 61

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           +I +  SG + +   +   Q+  G  L   +       +   + S+K+ +  +      +
Sbjct: 62  DIGTQISGRVIELFADFNDQVKTGQILAKLDPALLNAQLQQSEASLKSAQTALSV---TI 118

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +  N   +++EK F S+E  + +      S  ++V             +  + +RS
Sbjct: 119 NKANRSRNLIEKGFLSKEA-MDEVKELLDSARAQVIVSQAQVARDQANLDYSIIRS 173


>gi|224087547|ref|XP_002192527.1| PREDICTED: rho/rac guanine nucleotide exchange factor (GEF) 18
           [Taeniopygia guttata]
          Length = 1010

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 73/205 (35%), Gaps = 6/205 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +  + L   S         ++ + LD  +     +E     R + LL  L    +  S+ 
Sbjct: 599 SSDVQLHDPSSDAEEGSQTSDGTRLDDSSGVQPTVESQLVQRIQTLLQLLFSLQAVISQ- 657

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDL---ENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                  V R+      +   +   R +L   + K                +   L  + 
Sbjct: 658 -QDSYIEVQRATMADREKQHRLQSTRGNLLLEQEKQRNFEKQREELMNVQKLQSQLKLEQ 716

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              + + ++Q+R    +   L+E+  E + +   +++  +E   +   Y  ++ R L + 
Sbjct: 717 QRLERERSRQQREFELTEARLQEHAEEMRQLQERLSQDREELERQREAYQHDLER-LREA 775

Query: 270 QRTFADEMSKLTILEKTREQKTILS 294
           QR    E  +L  L K ++Q T+ S
Sbjct: 776 QRAVEKERERLDQLRKLKKQNTMSS 800



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 65/192 (33%), Gaps = 8/192 (4%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           E GSQ   GT L     ++ T    L +  I+ L   + + ++ +   ++  +V      
Sbjct: 612 EEGSQTSDGTRLDDSSGVQPTVESQLVQ-RIQTLLQLLFSLQAVISQQDSYIEVQRATMA 670

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            RE+Q      + +    +            L         + L +  LE + S  +   
Sbjct: 671 DREKQHRLQSTRGNLLLEQEKQRNFEKQREELMNVQKLQSQLKLEQQRLERERSRQQREF 730

Query: 193 SS----HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                  Q+    M+ L E+  +SQ+   + ER       +L      Q+ + +    L 
Sbjct: 731 ELTEARLQEHAEEMRQLQER--LSQDR-EELERQREAYQHDLERLREAQRAVEKERERLD 787

Query: 249 DEANLEFANYLK 260
               L+  N + 
Sbjct: 788 QLRKLKKQNTMS 799


>gi|313902491|ref|ZP_07835893.1| efflux transporter, RND family, MFP subunit [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467289|gb|EFR62801.1| efflux transporter, RND family, MFP subunit [Thermaerobacter
           subterraneus DSM 13965]
          Length = 476

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/306 (11%), Positives = 81/306 (26%), Gaps = 22/306 (7%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +     V  ++   +G I    V  G ++  G  L+  +       +D  + ++    
Sbjct: 55  GRVRARSEV-AVRPQAAGAITAVHVRVGDRVKAGQLLVELDPTVARAQVDQAEAALAA-- 111

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                  +       +  +L+   E R+ +L     +     ++     + + +++L   
Sbjct: 112 ---ARAAARQAAQAREAQILQADAELRQAELAREGARVQLDGARQRLATLQAQWQALGCA 168

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
                +       L    S   A  +                          E       
Sbjct: 169 AGSGPAATAAGGGLAGTGSSGWAGGAPQAGGTGTG-----------GPGAGGEGGCESLA 217

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKT 286
             L E     +    ++       +            D     +       + L +    
Sbjct: 218 ATLTEAQAAVRQAEFNLQAAQVRLDAARRARDLARQGDPAAAARAQVEQAEAALALARHQ 277

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
            +   + +P+AG +    +      A      PL+ +V       + A+V       V+ 
Sbjct: 278 LDLTRVTAPVAGVVAAIHA-QVGALASPQGVDPLVVLV-DPGPAQVEAQVPAGLYGAVEV 335

Query: 345 GYTATV 350
           G T  V
Sbjct: 336 GGTVEV 341


>gi|255320937|ref|ZP_05362111.1| macrolide-specific efflux protein MacA [Acinetobacter
           radioresistens SK82]
 gi|262380210|ref|ZP_06073365.1| membrane-fusion protein [Acinetobacter radioresistens SH164]
 gi|255302106|gb|EET81349.1| macrolide-specific efflux protein MacA [Acinetobacter
           radioresistens SK82]
 gi|262298404|gb|EEY86318.1| membrane-fusion protein [Acinetobacter radioresistens SH164]
          Length = 446

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 98/300 (32%), Gaps = 27/300 (9%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYR--SLKMKLTRMRSIYLNRLDLENKSSLLR 189
           E  + Q +       +    V   GI    +  ++  +++        +L  + K   L 
Sbjct: 30  EPEQPQYITAEVTRGNIEDSVLATGILEATQMVNVGAQVSGQVKKMNVKLGDQVKQGQLI 89

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A + S +++   +K         Q  L  ++  + K   E +     Q+NM         
Sbjct: 90  AQIDSIRQE-NEVKTAEANIKNQQAQLAVRQANLAKVEAEYQR----QRNMYAQDATSRA 144

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E     A+Y +    ++             L    +      I++P+ GT+V        
Sbjct: 145 EYESALASY-RTAQAEIAAINAQIEQSRLTLATAREDLGYTRIVAPMDGTVVAI-VTEEG 202

Query: 310 NYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                +Q    IV  +      I+A+++   +  V+ G      F    D   K + A +
Sbjct: 203 QTVNANQSAPTIVKLAKLDNMTIKAEISEADVMKVEPGQKVY--FTTLGDSETKHY-ASL 259

Query: 368 EKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +++P          +   ++  T  YY  +  +      + + +LR    A+V      
Sbjct: 260 RQVEPAPTSINSETTNNTSSSSSTAVYYNALFDVP-----NEDGKLRIDMTAQVYIILAE 314



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 55/137 (40%), Gaps = 2/137 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE SV ++G +     +V + +  SG +KK  V+ G Q+ QG  +   + I   + + 
Sbjct: 44  GNIEDSVLATGILEA-TQMVNVGAQVSGQVKKMNVKLGDQVKQGQLIAQIDSIRQENEVK 102

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC-SKVFNYG 156
             + +IKN +  +   ++ L  +  +Y      +        ++     S   ++     
Sbjct: 103 TAEANIKNQQAQLAVRQANLAKVEAEYQRQRNMYAQDATSRAEYESALASYRTAQAEIAA 162

Query: 157 ISSVYRSLKMKLTRMRS 173
           I++     ++ L   R 
Sbjct: 163 INAQIEQSRLTLATARE 179


>gi|253989370|ref|YP_003040726.1| hypothetical protein PAU_01890 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780820|emb|CAQ83982.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 424

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 106/311 (34%), Gaps = 33/311 (10%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +  D +  +  V+E     R + LL           +     +    R+++       S 
Sbjct: 75  APFDGIIAEVGVIEGQRVKRGQPLLSLDTAQLDIQLRQALTELLKAQRAVQDLADWKNSQ 134

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            + R       +  +  L+  ++ LT  + LFE+  V++ +++  E+ V    L+L    
Sbjct: 135 DVARA--RRALTNAQLSLNDTERKLTDTRVLFERGIVARMEVDTLEQQVKVQRLDLAAAK 192

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E   M                 + K    + +      A+  ++   L+  + Q+ ++S
Sbjct: 193 AELSAM-----------------FDKGTGENRQIADMELANAQARYQALQTQQVQRELVS 235

Query: 295 PIAGTIVYNQSFSS--------SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           P  G +V      S             Q  PL  I+   ++  + A++    +  + +G 
Sbjct: 236 PFDGIVVRPLVTESDKTLSIQKGTRVTQGAPLFGIINLEQVQAV-ARIEEADLHQLYEGM 294

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              +    +A +     +  I+ I  +  +   +      Y+V++ +  L        +R
Sbjct: 295 PVQITGDGFAGL---SLQGQIKTI-GVQGRSTESQGAGVTYDVLVAVDPLTPEQRQ-RIR 349

Query: 407 NGFPAEVLFTA 417
               A++    
Sbjct: 350 LNMSAKLAIVT 360



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 71/169 (42%), Gaps = 7/169 (4%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I +PF GII +  V  G ++ +G PLL+ +  +    I L++   + L+      +   
Sbjct: 72  TITAPFDGIIAEVGVIEGQRVKRGQPLLSLDTAQL--DIQLRQALTELLKAQ-RAVQDLA 128

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D+ N++     +   +  +  L+   +  +    +F  GI +      ++    + + + 
Sbjct: 129 DWKNSQDVARARRALTNAQLSLNDTERKLTDTRVLFERGIVARMEVDTLE----QQVKVQ 184

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           RLDL    + L A+      +   + ++   NA ++    Q +++  + 
Sbjct: 185 RLDLAAAKAELSAMFDKGTGENRQIADMELANAQARYQALQTQQVQREL 233


>gi|239832247|ref|ZP_04680576.1| HlyD family secretion protein [Ochrobactrum intermedium LMG 3301]
 gi|239824514|gb|EEQ96082.1| HlyD family secretion protein [Ochrobactrum intermedium LMG 3301]
          Length = 355

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 48/405 (11%), Positives = 105/405 (25%), Gaps = 83/405 (20%)

Query: 21  TLLSIIGIIGLITWSILLPI------EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            L   I ++    +     +      E     +G I   +  +  KSP  G I++  V+ 
Sbjct: 9   ILAGAIIVLAAGAYYAWKSLNGDGLPEGIARGNGRIEAVEIDISTKSP--GRIREILVDE 66

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +     L   +  +    +   +  ++     I+T +S +     ++   E     R
Sbjct: 67  GDFVQANDILARMDTDQLESQLKQAEAQLRRAEIGIETARSLVTQREAEHTAAEATVAQR 126

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E QL     +                  +   +LT+ R+I    LD +  ++        
Sbjct: 127 EAQLDAAQRRL-----------------ARSQQLTQTRTISQQVLDDDRATAQGAEAAVG 169

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             +                              ++   ++   +  +  I    ++A L 
Sbjct: 170 AARA-------------QLAATEAAIGAAKAQVIDAEASVEAARAAIASIQADINDATL- 215

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                                                  +P  G + Y +          
Sbjct: 216 --------------------------------------RAPKPGRVQY-RVAQPGEVLSA 236

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK---FKAIIEKID 371
              ++ +V      Y+   +   Q   V  G  A +               F A + +  
Sbjct: 237 GGRVLNLV-DVSDVYMTFFLPTAQAGRVAIGAEARIVLDAAPQYVIPANISFVADVAQFT 295

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           P   + +   Q   +  V  KI+         +++ G P      
Sbjct: 296 PKTVETEEERQKLMF-RVKAKISQELLQKYIQQVKTGLPGMAYVK 339


>gi|154149493|ref|YP_001406638.1| MacA [Campylobacter hominis ATCC BAA-381]
 gi|153805502|gb|ABS52509.1| MacA [Campylobacter hominis ATCC BAA-381]
          Length = 394

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 77/246 (31%), Gaps = 42/246 (17%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLEL-----RENIHEQKNMLRHINELYDE--------A 251
            +K   ++Q D  +QE  + K   +L          E K     I  L ++        +
Sbjct: 79  VKKGDMIAQIDSEKQENEISKEKAQLVIYEANLKAAEIKAQNAKIQFLREQKLYKKDATS 138

Query: 252 NLEFANYLKEIS---RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             +  N   E +    +++Q Q         L   E       I +P+ GTIV       
Sbjct: 139 KEKLENAKNEAALSAANVKQIQAQIEQTKLALDTAETNLGYTKISAPLDGTIVSVPV-EE 197

Query: 309 SNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVR-FPHYADIREKKFKA 365
                 +Q    IV  +      IR +++   I  VK G            DI+    KA
Sbjct: 198 GRTVNANQTTPTIVKIADLSKMEIRLQISEGDISLVKVGQNVEYTILSALDDIK----KA 253

Query: 366 IIEKIDPIISQQDNNLQTQE------------YYEVILKITDLAFSDNNIELRNGFPAEV 413
            I  IDP ++   +    +             Y+   + + D     N+  L+ G   + 
Sbjct: 254 EISSIDPALTTLSDGSYDKTNLNGSSSSNEAVYFYAKVLVDD-----NDGFLKIGMTTQN 308

Query: 414 LFTAKN 419
                 
Sbjct: 309 TIIVNE 314



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+  V ++GE+    ++V++ +  SG IKK  V+ G  + +G  +   +  +  + I  +
Sbjct: 42  IKSVVIANGEV-YAQDLVDVGAQVSGQIKKLYVKVGDNVKKGDMIAQIDSEKQENEISKE 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +     ++    + +   N K   L +    +++       +     + +    +  
Sbjct: 101 KAQLVIYEANLKA--AEIKAQNAKIQFLREQKLYKKDATSKEKLENAKNEAALSAANVKQ 158

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   ++     + +   N
Sbjct: 159 IQAQIEQTKLALDTAETN 176


>gi|119493201|ref|ZP_01624076.1| Methyltransferase FkbM [Lyngbya sp. PCC 8106]
 gi|119452766|gb|EAW33943.1| Methyltransferase FkbM [Lyngbya sp. PCC 8106]
          Length = 800

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 80/204 (39%), Gaps = 2/204 (0%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           ++   +   +   + L+  ++  ++    L  + +  +   +  + QL +         +
Sbjct: 590 DSQTQLKDSQTHSQQLQTQLEESQTHSQQLQTELEQSQTHSQQLQTQLEESQTHSQQLQT 649

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++      S     +++ ++  S  L   +LE      + L +  ++  T +K L ++  
Sbjct: 650 ELEQSQTHSQQLQTQLEQSQTHSQQLQ-TELEESQVQSQQLQTELEESQTQLKQLEDQLK 708

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            +Q+   Q ++ + +S  EL +   E +     ++E+  E     +  L +  ++LE+ Q
Sbjct: 709 KTQSQQQQTQQELDESRSELHQTREELELTQFQLDEIQVELEQSQSQ-LHQTKQELEEAQ 767

Query: 271 RTFADEMSKLTILEKTREQKTILS 294
                   +L    KT   + + +
Sbjct: 768 SKLQKTQVELQNQPKTNYAEHVKA 791


>gi|91200716|emb|CAJ73768.1| similar to AcrA/AcrE family multidrug efflux protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 404

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 95/291 (32%), Gaps = 34/291 (11%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L   +  + S  S +F     ++  +    + + +S   ++  + +    L     S  K
Sbjct: 47  LQPAIRVHVSGISTIFPSQTFTLLNASGYVVAQRKSAISSK--ITSSLVSLSVEEGSRAK 104

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
              ++  L  K+A++   L + +  +  +   L++   E        N   +   +   +
Sbjct: 105 KGDVIACLENKDAIAA--LKRAKADMNTARYRLKQAEAELTEAKLAYNRTTNLLQMGVVS 162

Query: 258 ---------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV------Y 302
                      K     +E+ +       + ++  +   +   + +P  G ++       
Sbjct: 163 PSEYDTADAKYKLAIAKVEEGKAAIRSGKAAVSEAKVQLDYTFLRAPFDGVVLTKNADIG 222

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           +        A     ++ I        +   V+   I+ V  G+   ++   +   R   
Sbjct: 223 DIVTPVGAAANARASVVTIA-DLDSLMVEVDVSESNIEQVSAGHPCEIQLDAFPGER--- 278

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            +  +  I P   +   +        +++K+   AF+D +  +     A+V
Sbjct: 279 LRGEVHMIVPTADRTKAS--------ILVKV---AFADKDSRIMPEMSAKV 318


>gi|126173758|ref|YP_001049907.1| secretion protein HlyD family protein [Shewanella baltica OS155]
 gi|125996963|gb|ABN61038.1| secretion protein HlyD family protein [Shewanella baltica OS155]
          Length = 378

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 61/179 (34%), Gaps = 3/179 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E + + + +P   +I +  V  G Q+  G  LLT +       + L++  ++  +  +
Sbjct: 80  TVERDRLTLTAPVGELITQVNVVEGQQVKAGEVLLTLDSTSANARLALRQAELEQAKAKL 139

Query: 111 --DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF-NYGISSVYRSLKMK 167
                 + L+ +     VL+ A  S +E    F        +KV     + +   +    
Sbjct: 140 SEAVTGARLEDIERAKAVLDGANASVKEAQRAFERTNRLYATKVLSQADLDTARAARDTS 199

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           L +      +   LEN +   +   +             EK A++   L      V  +
Sbjct: 200 LAKQAEAEQSLRLLENGTRSEQLEQAKAAVAAASASVAIEKKALADLSLVAARDAVVDT 258



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 87/307 (28%), Gaps = 37/307 (12%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           + +  L  + +V+E       E LL       +    +    +      L   +T  R  
Sbjct: 90  APVGELITQVNVVEGQQVKAGEVLLTLDSTSANARLALRQAELEQAKAKLSEAVTGARLE 149

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            + R   +       A +   Q+       L+    +SQ DL+        S  +  E  
Sbjct: 150 DIERA--KAVLDGANASVKEAQRAFERTNRLYATKVLSQADLDTARAARDTSLAKQAEAE 207

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              + +                      S  LEQ +   A   + + I +K     ++++
Sbjct: 208 QSLRLLENGTR-----------------SEQLEQAKAAVAAASASVAIEKKALADLSLVA 250

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
                +         +       L+ ++      Y+R  +    +  VK G +  +    
Sbjct: 251 ARDAVVDTLPWR-VGDRIAAGTQLIGLLASEDP-YVRVYLPATWLDRVKAGDSVNILVDG 308

Query: 355 YADIREKKFKAIIEKI------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
               RE      +  I       P  +  + +     Y      +TD+  S    +L  G
Sbjct: 309 ----REIPITGTVRNIRSQPAYTPFYALNERDRARLMY------LTDITISAAGQDLPTG 358

Query: 409 FPAEVLF 415
               V  
Sbjct: 359 MALAVEI 365


>gi|320183283|gb|EFW58138.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor protein YbhG [Shigella flexneri CDC
           796-83]
          Length = 331

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDITQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 93/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++  ++  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQVKAGVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F      +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDITQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|319760957|ref|YP_004124894.1| efflux transporter, rnd family, mfp subunit [Alicycliphilus
           denitrificans BC]
 gi|317115518|gb|ADU98006.1| efflux transporter, RND family, MFP subunit [Alicycliphilus
           denitrificans BC]
          Length = 530

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 45/378 (11%), Positives = 105/378 (27%), Gaps = 44/378 (11%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++    E+G     G P L     E    +      +      +  EK AL+F  +K  +
Sbjct: 101 LEALLAEDG-----GEPRLRIWLYEKEKALASSAAKVSATVTRLTGEKQALNFTPDKDSL 155

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L +            +    +     F++        L     +  SI ++     +  S
Sbjct: 156 LSREIVPEPHAFEINIVAQTANAPFTFSFSQEEGKVELSDAQIKAASIGIDTAGAASIKS 215

Query: 187 LLRALLSSHQKD------LTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENI 234
            L+        +      +  +  + E         V +  +         S        
Sbjct: 216 ALQLPGEIRLNEDRTSHVVPRIAGVVESVQASLGQTVKKGQVLAVIASPAASEQRSELQT 275

Query: 235 HEQKNMLRHI----NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL------E 284
            +++  L        +   E  +       +  + L + Q   A+   KL+ +       
Sbjct: 276 AQKRLALAQTTFEREKRLWEQKISAEQDYLQAGQALNEAQVAVANAQQKLSAVGLAPGSS 335

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
               +  + +P  G ++     S     ++   +   V      +    V  K +  V+ 
Sbjct: 336 GGLNRFELRAPFDGVVIEKHL-SLGEAVKEDAAVFT-VSDLGQVWAEINVPAKDLPLVRV 393

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G   +++   +    +      I  +  +I +Q             +    +  ++    
Sbjct: 394 GEKVSIKATAFDASAQ----GTITFVGALIGEQT-----------RMAKARVVLANPQGA 438

Query: 405 LRNGFPAEVLFTAKNTTL 422
            R G    V   A  T +
Sbjct: 439 WRPGLFVNVEVIASETAV 456



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 45/133 (33%), Gaps = 5/133 (3%)

Query: 35  SILLPIEISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF-EDIET 92
           +    I+ ++   GEI LNED    +    +G+++  Q   G  + +G  L        +
Sbjct: 208 AGAASIKSALQLPGEIRLNEDRTSHVVPRIAGVVESVQASLGQTVKKGQVLAVIASPAAS 267

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
               +L+    +        E+        ++ + D L+      E Q+     +   + 
Sbjct: 268 EQRSELQTAQKRLALAQTTFEREKRLWEQKISAEQDYLQAGQALNEAQVAVANAQQKLSA 327

Query: 150 SKVFNYGISSVYR 162
             +       + R
Sbjct: 328 VGLAPGSSGGLNR 340


>gi|196234519|ref|ZP_03133342.1| efflux transporter, RND family, MFP subunit [Chthoniobacter flavus
           Ellin428]
 gi|196221399|gb|EDY15946.1| efflux transporter, RND family, MFP subunit [Chthoniobacter flavus
           Ellin428]
          Length = 431

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 63/212 (29%), Gaps = 21/212 (9%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R   +  L   E   ++   L     + +    +F   L      ++  +         L
Sbjct: 127 RDQAQEELGKAEADFKRNAELFKSKLIAENVYTDFKTALAVARLHVQSAEHLANQARFAL 186

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ----SQPLMKIVPHSKLTYIRAKVTP 336
                   + TI++P+ GT++  +S                +M I    +   + A+V  
Sbjct: 187 DQANADLTKTTIVAPVDGTVIRLKSQLGERVLGTSFNMGTEIMTIAQLDE---MEARVDI 243

Query: 337 --KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID------PIISQQDNNLQTQEYYE 388
               I  +K+G    +    + D + K   + +             S   +  Q    +E
Sbjct: 244 GEMDIVLIKEGQNVRLEVDPFKDRKFKGTVSAVANASKNSSSQSPASTSSSQPQEAPKFE 303

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           V +++ D          R G         ++ 
Sbjct: 304 VRIRVLDKE------TFRPGMSVTAEIETRSR 329



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 45/132 (34%), Gaps = 18/132 (13%)

Query: 20  MTLLSIIGIIGLITWSILLP-----------------IEISVSSSGEILNEDNVVEIKSP 62
           + +LS++ ++ +  W                      +  +V ++G I     V  I   
Sbjct: 21  IIVLSVLAVLAIAGWYKYAHKPEELISVETAKVTRRDLTETVLANGRIQPILQV-MINPE 79

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G I +  V+ G  + +G  L+         + +  + S  +     D  +  L     
Sbjct: 80  VAGEIIELPVKEGQSVKKGDLLVQIRPDNYLAVKNSAEASHLSAIAGRDQAQEELGKAEA 139

Query: 123 KYDVLEKAFESR 134
            +    + F+S+
Sbjct: 140 DFKRNAELFKSK 151


>gi|189499955|ref|YP_001959425.1| efflux transporter, RND family, MFP subunit [Chlorobium
           phaeobacteroides BS1]
 gi|189495396|gb|ACE03944.1| efflux transporter, RND family, MFP subunit [Chlorobium
           phaeobacteroides BS1]
          Length = 424

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 92/233 (39%), Gaps = 23/233 (9%)

Query: 210 AVSQNDLNQQERIVYKST-LELRENIHEQKNMLRHINELYDEANLEFANYL-----KEIS 263
            ++Q + N+    + KS  LE R    + ++ LR  + LY +  +  ++YL      E S
Sbjct: 101 YINQVEQNRARLNLGKSQSLEARAGKIKAEDELRKASMLYADKLISDSDYLTAKTNAEAS 160

Query: 264 RDLEQNQR-TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ----PL 318
           R + +    T     S L    +  ++ T+ SP+ GT++   S          Q     +
Sbjct: 161 RAVYEAALFTIEQNKSLLDQSLEQLDKTTVTSPMNGTVIALDSKLGERVVGTGQFQGTNV 220

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-PIISQQ 377
           ++I  +     +  +V    I +V +     V    + + +   F  I+ +I    I+Q 
Sbjct: 221 LRIA-NLDSMQVEVEVNENDIVNVNRNDNVIVTVDAFGERK---FDGIVNEISNSAITQA 276

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           +   +    + V ++I      +++  L+ G  A      +   +   ++ PI
Sbjct: 277 EGTQEEVTNFSVKIRI-----LNHDRLLKPGMSATADIETER--VQNALVVPI 322



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 54/143 (37%), Gaps = 9/143 (6%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+++G+I  E  V  I    SG I +  V+ G  +  G  L   +        D+    +
Sbjct: 54  VTATGKIEPELEV-TISPDVSGEITELHVKEGEAVENGALLFKIQP-------DVYINQV 105

Query: 104 KNLRCHIDTEKSA-LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +  R  ++  KS  L+    K    ++  ++        +       +K       +VY 
Sbjct: 106 EQNRARLNLGKSQSLEARAGKIKAEDELRKASMLYADKLISDSDYLTAKTNAEASRAVYE 165

Query: 163 SLKMKLTRMRSIYLNRLDLENKS 185
           +    + + +S+    L+  +K+
Sbjct: 166 AALFTIEQNKSLLDQSLEQLDKT 188


>gi|258624600|ref|ZP_05719538.1| Membrane-fusion protein [Vibrio mimicus VM603]
 gi|258583147|gb|EEW07958.1| Membrane-fusion protein [Vibrio mimicus VM603]
          Length = 370

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 72/191 (37%), Gaps = 12/191 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +   
Sbjct: 36  VEKQAVAVGQIMPS-HAVAIKSQINGIVGEIYVREGQLVEQGQPLIKVRPNPTPQALTDA 94

Query: 100 KVSIKNLRCHIDTEKSALDFL----------NNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              +     +++++   L  L           N  D +    E + ++      + +   
Sbjct: 95  STELMQSEANLESDLQRLANLEHLVKQKIIPENYDDYVRAKAEVKAKKAEVQQKRQNLEL 154

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +     I     S  +      +I   ++++ E   S   +  ++    L  MKN+  K
Sbjct: 155 IRSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMMQLADMKNIVFK 214

Query: 209 NAVSQNDLNQQ 219
            +VS++D  Q 
Sbjct: 215 GSVSEHDAAQL 225



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 101/262 (38%), Gaps = 34/262 (12%)

Query: 183 NKSSLLRALLSSHQKDLTMMK-NLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           + +  +++ ++    ++ + +  L E+   + +   N   + +  ++ EL ++    ++ 
Sbjct: 49  SHAVAIKSQINGIVGEIYVREGQLVEQGQPLIKVRPNPTPQALTDASTELMQSEANLESD 108

Query: 241 LRHINELYDEANLEFA-----------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+ +  L      +               +K    +++Q ++      S    + + +  
Sbjct: 109 LQRLANLEHLVKQKIIPENYDDYVRAKAEVKAKKAEVQQKRQNLELIRSGEASIGQAKLS 168

Query: 290 KTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            T+ +PI+GTI+  +              Q +  +M++    K    +  V+      + 
Sbjct: 169 STLYAPISGTILNIKV-EVGEPIISTESSQAATEMMQLA-DMKNIVFKGSVSEHDAAQLI 226

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL---QTQEY---YEVILKITDLA 397
            G  A +    Y    E+  +  + K+  I S++ NN    + + +   +EV +    + 
Sbjct: 227 SGMPAIITVAPYP---EQAIEGQLTKV-AIQSERLNNPENKEGKSFDNGFEVEIGQLQI- 281

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
              ++I LR+GF A    T + 
Sbjct: 282 --PDSITLRSGFSASAQITLQR 301


>gi|254508252|ref|ZP_05120376.1| membrane-fusion protein [Vibrio parahaemolyticus 16]
 gi|219548869|gb|EED25870.1| membrane-fusion protein [Vibrio parahaemolyticus 16]
          Length = 360

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 59/185 (31%), Gaps = 18/185 (9%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           E+   +  + E    A     +   +        Q    +  + ++  +      ++ +P
Sbjct: 119 ERARAMLKVREKEFNAAKSLKDRGLQGEVAYTNAQAALVEAKAMVSNAKIALRNTSVTAP 178

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +G + +       ++     P+  ++       I A V+ + IQ +  G +A VRF   
Sbjct: 179 FSGIVEHLFI-ERGDFVGVGDPVASLI-DLSQIIIEADVSERHIQDLTLGQSARVRFIA- 235

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                +     +  I  + S   N               ++  ++ +  +  G  AEV  
Sbjct: 236 ----GENTAGQVRYISRVSSPSTNTF-----------PIEIVLANPDQRIPAGISAEVEL 280

Query: 416 TAKNT 420
             K  
Sbjct: 281 NLKEK 285



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 53/141 (37%), Gaps = 4/141 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I + +VE G  + QG  +   +       +D++    + +    + E +A   L ++ 
Sbjct: 87  GKIIQLKVEKGQSVEQGQVIALID----KGDLDIQLERARAMLKVREKEFNAAKSLKDRG 142

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E A+ + +  L++      +    + N  +++ +  +   L   R  ++   D    
Sbjct: 143 LQGEVAYTNAQAALVEAKAMVSNAKIALRNTSVTAPFSGIVEHLFIERGDFVGVGDPVAS 202

Query: 185 SSLLRALLSSHQKDLTMMKNL 205
              L  ++         +++L
Sbjct: 203 LIDLSQIIIEADVSERHIQDL 223


>gi|163802286|ref|ZP_02196180.1| hypothetical protein 1103602000417_AND4_14361 [Vibrio sp. AND4]
 gi|159173815|gb|EDP58629.1| hypothetical protein AND4_14361 [Vibrio sp. AND4]
          Length = 249

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 2/115 (1%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           +   +  + E   +A     +   +        Q    D  + L+ +E   +  T+ +P 
Sbjct: 1   RAKAMLRVKEKEFKAAESLKSRGLQGEVAFATAQAALVDARANLSNVEIALKNTTVRAPF 60

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
            G I+ ++     ++     P+  ++   +   I   V+ + IQ +K+G  A VR
Sbjct: 61  DG-ILDHRFVELGDFVGVGDPIATVI-DLEKLAIEVNVSERHIQFLKQGQQADVR 113


>gi|62317686|ref|YP_223539.1| exopolysaccharide biosynthesis protein Bme11 [Brucella abortus bv.
           1 str. 9-941]
 gi|83269669|ref|YP_418960.1| polysaccharide export protein [Brucella melitensis biovar Abortus
           2308]
 gi|189022941|ref|YP_001932682.1| Polysaccharide export protein [Brucella abortus S19]
 gi|237817233|ref|ZP_04596225.1| exopolysaccharide biosynthesis protein Bme11 [Brucella abortus str.
           2308 A]
 gi|254698973|ref|ZP_05160801.1| Polysaccharide export protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|254732421|ref|ZP_05190999.1| Polysaccharide export protein [Brucella abortus bv. 4 str. 292]
 gi|256043312|ref|ZP_05446247.1| Polysaccharide export protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260544926|ref|ZP_05820747.1| polysaccharide export protein [Brucella abortus NCTC 8038]
 gi|260564520|ref|ZP_05835005.1| polysaccharide export protein [Brucella melitensis bv. 1 str. 16M]
 gi|260760221|ref|ZP_05872569.1| polysaccharide biosynthesis/export protein [Brucella abortus bv. 4
           str. 292]
 gi|260763459|ref|ZP_05875791.1| polysaccharide biosynthesis/export protein [Brucella abortus bv. 2
           str. 86/8/59]
 gi|265989736|ref|ZP_06102293.1| Bme11 [Brucella melitensis bv. 1 str. Rev.1]
 gi|5478241|gb|AAD43841.1|AF076290_11 Bme11 [Brucella melitensis]
 gi|62197879|gb|AAX76178.1| exopolysaccharide biosynthesis protein Bme11 [Brucella abortus bv.
           1 str. 9-941]
 gi|82939943|emb|CAJ12970.1| Polysaccharide export protein [Brucella melitensis biovar Abortus
           2308]
 gi|189021515|gb|ACD74236.1| Polysaccharide export protein [Brucella abortus S19]
 gi|237788046|gb|EEP62262.1| exopolysaccharide biosynthesis protein Bme11 [Brucella abortus str.
           2308 A]
 gi|260098197|gb|EEW82071.1| polysaccharide export protein [Brucella abortus NCTC 8038]
 gi|260152163|gb|EEW87256.1| polysaccharide export protein [Brucella melitensis bv. 1 str. 16M]
 gi|260670539|gb|EEX57479.1| polysaccharide biosynthesis/export protein [Brucella abortus bv. 4
           str. 292]
 gi|260673880|gb|EEX60701.1| polysaccharide biosynthesis/export protein [Brucella abortus bv. 2
           str. 86/8/59]
 gi|263000405|gb|EEZ13095.1| Bme11 [Brucella melitensis bv. 1 str. Rev.1]
          Length = 415

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 77/221 (34%), Gaps = 14/221 (6%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+     +    + ++  +    R   + E    DF     +       +  + 
Sbjct: 151 VTAGMQLI--SAQQEYADLQMQITAQTIRRARFEAELKGTDFTYAVPEQ-----TAANKD 203

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++            +F+   +++    +    +  S       L+    L    +   Q+
Sbjct: 204 MVALTRHMVEGERTLFDMRRNNLAAERRALEAQAASYGDEITTLQQSIKLHDTEIQLLQE 263

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDE 250
           ++   K+L ++   +++ L   ER +  +  +       L      Q  + + I  L + 
Sbjct: 264 NVNSSKSLVDRGLAAKSSLRDMERDLSSTRRDALELASFLARARQNQLAVEQRIANLDET 323

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              E A+ L+EI  ++ + QR    ++  +  + K+  Q +
Sbjct: 324 RRSEAASSLQEIDLNMARMQRRSNSQLEAMAEIAKSSGQIS 364


>gi|303327608|ref|ZP_07358049.1| multidrug resistance protein A [Desulfovibrio sp. 3_1_syn3]
 gi|302862548|gb|EFL85481.1| multidrug resistance protein A [Desulfovibrio sp. 3_1_syn3]
          Length = 414

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 82/262 (31%), Gaps = 26/262 (9%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           SL   +     +       E   ++ +  L   Q +L   + L +  AV + +       
Sbjct: 118 SLASAVRETCKLEAELRQSEANIAMRKIDLQRQQGNLERRQQLIKDKAVRKEEFIHSIED 177

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           V  +    R  +   +     +  +  +  +     ++E +  + +              
Sbjct: 178 VATA----RHALSVAEAQRNALTAVLLDTPVAEQPAVREAASAVRERWL----------- 222

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                ++ T+ SP+ G +   ++     Y    + L+ +VP     ++ A     Q++ +
Sbjct: 223 ---DLQRATVRSPVRGQVAR-RAVQVGEYVTPGKALLAVVPLDS-LWVDANFKESQLKRM 277

Query: 343 KKGYTATVRFPHYADIRE--KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFS 399
           + G  A +    Y          +        + S       T  + +V+ ++   +A  
Sbjct: 278 RIGQPALITADMYGGSVTYHGTVQGFAAGTGSVFSLLPPQNATGNWIKVVQRVPVRIALR 337

Query: 400 DNNIELRN---GFPAEVLFTAK 418
           ++ +       G    V    K
Sbjct: 338 EDELREHPLLVGLSVTVEVATK 359



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/208 (11%), Positives = 66/208 (31%), Gaps = 10/208 (4%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
            F      R     L         G+   I W+++L  E +     +     N V +   
Sbjct: 22  DFDTLRAGRRARILLLLTGFFLAAGVTWGIWWALVLRYEENTD---DAYVSGNTVTVMPQ 78

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKS 115
            +G +     ++  ++  G  L+  + ++     +   VS+ +       L   +   ++
Sbjct: 79  VAGRVTAVLADDTDRVEAGQALVPIDPVDARLAYEHALVSLASAVRETCKLEAELRQSEA 138

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            +          +   E R++ + D   +       + +   +    S+        +  
Sbjct: 139 NIAMRKIDLQRQQGNLERRQQLIKDKAVRKEEFIHSIEDVATARHALSVAEAQRNALTAV 198

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMK 203
           L    +  + ++  A  +  ++ L + +
Sbjct: 199 LLDTPVAEQPAVREAASAVRERWLDLQR 226


>gi|258592673|emb|CBE68982.1| Secretion protein HlyD [NC10 bacterium 'Dutch sediment']
          Length = 399

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 88/257 (34%), Gaps = 11/257 (4%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
           P    + +SG +  +     + S   +  +    V  G ++  G  L+  +D +      
Sbjct: 48  PFPEVIRASGTV--QSRRQSVLSAKITASVVAVPVTEGDRVKAGQVLVELDDRDVKAQRG 105

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS--TCSKVFNY 155
             +  ++  +  ++  ++ +    N  D    A +++EE  L  L +Y++      V   
Sbjct: 106 RAEAGLREAKDALEEVEAVILAQGNAID----AAKAQEELALATLARYNTLLERRSVAPQ 161

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-- 213
               V    K     ++     R+ L  + S   A +   Q+ L   + +F    +    
Sbjct: 162 EFDEVAARSKAASAELQRAREVRISLSARKSQTLAKIDQAQEALHHAQAVFGYTTIRAPF 221

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + +   + +   +       +   ++    +     E+ +      ++   +++   RT 
Sbjct: 222 DGIIVAKNVEVGNLAAPGAPLLTVEDERYRLEATVQESEIRKIRIGQQAEAEIDAIGRTL 281

Query: 274 ADEMSKLTILEKTREQK 290
           +  + ++      + + 
Sbjct: 282 SGPIVEIVPAADPQSRT 298



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 82/268 (30%), Gaps = 9/268 (3%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           + ++S +  +  +   L+   E           +     +K+    ++            
Sbjct: 30  EEKRSVVTGVKVETIGLQPFPEVIRASGTVQSRRQSVLSAKITASVVAVPVTEGDRVKAG 89

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN--LFEKNAV----SQNDLNQQERIVY 224
              + L+  D++ +     A L   +  L  ++   L + NA+    +Q +L       Y
Sbjct: 90  QVLVELDDRDVKAQRGRAEAGLREAKDALEEVEAVILAQGNAIDAAKAQEELALATLARY 149

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            + LE R    ++ + +   ++               +S    Q           L   +
Sbjct: 150 NTLLERRSVAPQEFDEVAARSKAASAELQRAREVRISLSARKSQTLAKIDQAQEALHHAQ 209

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
                 TI +P  G IV        N A    PL+ +    +   + A V   +I+ ++ 
Sbjct: 210 AVFGYTTIRAPFDGIIVAKNV-EVGNLAAPGAPLLTV--EDERYRLEATVQESEIRKIRI 266

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDP 372
           G  A                 I+   DP
Sbjct: 267 GQQAEAEIDAIGRTLSGPIVEIVPAADP 294


>gi|254489885|ref|ZP_05103080.1| efflux transporter, RND family, MFP subunit [Methylophaga
           thiooxidans DMS010]
 gi|224464970|gb|EEF81224.1| efflux transporter, RND family, MFP subunit [Methylophaga
           thiooxydans DMS010]
          Length = 410

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 86/261 (32%), Gaps = 17/261 (6%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  +L+ + E+  EQ+    G    +  ++     + V    + +   +  I  +    +
Sbjct: 65  RDAMLKASLEADVEQVHVLEGDNVRSGQRLLKLDDTDVLLQRQQRQADIDEILASIDSEK 124

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +     ALL + Q+ +     L +K  V    L Q       +  E +    +Q   L+
Sbjct: 125 ARFKRDTALLDNQQQLVA----LADKAVVRAQKLEQTRLASKAALDEAKAAYEQQVLSLK 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +    DE               L Q +   +   + L   E  + +  I +P  G +  
Sbjct: 181 QLQFDIDEHPAR-----------LAQRRAALSRAQALLEQTEVNQRRTEIKAPFNGRVAK 229

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +  +  +    L++ V       +RA++  + I  V++           A +  + 
Sbjct: 230 LNV-ALGDRVRAGDSLVQ-VYDLDNLEVRAQIPGRYINQVRQMMQKGKSLQAVAQLDGQT 287

Query: 363 FKAIIEKIDPIISQQDNNLQT 383
               + ++   + Q    L  
Sbjct: 288 IHLELTRLSGEVRQDSGGLDG 308



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 86/234 (36%), Gaps = 17/234 (7%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++  V  G  +  G  LL  +D +       ++  I  +   ID+EK+           
Sbjct: 77  VEQVHVLEGDNVRSGQRLLKLDDTDVLLQRQQRQADIDEILASIDSEKARFKR------- 129

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            + A    ++QL+    K      K+    ++S   +L           L+   L+    
Sbjct: 130 -DTALLDNQQQLVALADKAVVRAQKLEQTRLAS-KAALDEAKAAYEQQVLSLKQLQFDID 187

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              A L+  +  L+  + L E+  V+Q    + +        +L   + ++      + +
Sbjct: 188 EHPARLAQRRAALSRAQALLEQTEVNQRR-TEIKAPFNGRVAKLNVALGDRVRAGDSLVQ 246

Query: 247 LYDEANLEFA-----NYLKEISRDLE--QNQRTFADEMSKLTILEKTREQKTIL 293
           +YD  NLE        Y+ ++ + ++  ++ +  A    +   LE TR    + 
Sbjct: 247 VYDLDNLEVRAQIPGRYINQVRQMMQKGKSLQAVAQLDGQTIHLELTRLSGEVR 300



 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 3/83 (3%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT---FEDIETTDLIDLKKVSIKN 105
           +        EIK+PF+G + K  V  G ++  G  L+     +++E    I  + ++   
Sbjct: 209 QTEVNQRRTEIKAPFNGRVAKLNVALGDRVRAGDSLVQVYDLDNLEVRAQIPGRYINQVR 268

Query: 106 LRCHIDTEKSALDFLNNKYDVLE 128
                     A+  L+ +   LE
Sbjct: 269 QMMQKGKSLQAVAQLDGQTIHLE 291


>gi|66044380|ref|YP_234221.1| secretion protein HlyD [Pseudomonas syringae pv. syringae B728a]
 gi|63255087|gb|AAY36183.1| Secretion protein HlyD [Pseudomonas syringae pv. syringae B728a]
 gi|330969194|gb|EGH69260.1| secretion protein HlyD [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 388

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 4/188 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V+ G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVKEGQQVKAGDLLATLDDRSIRAALEQARAQL 113

Query: 104 KNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +  +D  +  L     L     +  + F+ ++  +           + +    +   
Sbjct: 114 AQSKAQLDVAQLDLKRYRQLTQDNGISRQTFDQQQAMVRQLEATAKGNEASINASQVQLS 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y  ++  +T    I         + S    L S  Q D   ++    +  +        E
Sbjct: 174 YTQIRSPVTGRVGIRNVDEGNFLRVSDAAGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAE 233

Query: 221 RIVYKSTL 228
           R       
Sbjct: 234 RNAATVKA 241



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 76/252 (30%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L ++       +   + +       +R  + + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVKEG----QQVKAGDLLATLDDRSIRAALEQARAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTQDNGISRQTFDQQQAMVRQLEATAKGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P     + +   A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDAAGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAERNAA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TV+              +  +  ID  +S     ++               F +   +L 
Sbjct: 238 TVKAYQGDGAANGLLLGEGTLSLIDNQVSASTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|90426136|ref|YP_534506.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90108150|gb|ABD90187.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 356

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 46/395 (11%), Positives = 90/395 (22%), Gaps = 80/395 (20%)

Query: 32  ITWSILLPIE---ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
             W +L   +      S +G I   +  +  KSP  G I++  V  G  +  G  L   +
Sbjct: 23  FAWKVLGKSDLPPGIASGNGRIEATEIDISTKSP--GRIREILVAEGDYVTAGQVLARMD 80

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
                            L        + L       D  +     RE +           
Sbjct: 81  T--------------DQLEAQRRQATAQLRRAAIGVDTAKSLVTQREAE----------- 115

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
                                        R       +   A L + ++ L   + L + 
Sbjct: 116 -----------------------------RTAAVAVIAQREAQLDALERKLARAETLIKT 146

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           +AVSQ  L+                    +   +                +      +  
Sbjct: 147 SAVSQQVLDDDR---------------ANEQGAKAAVAAAQAQLAATEAAISAAKAQVID 191

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
                    + +  +       T+ SP  G + Y +             ++ +V      
Sbjct: 192 AGAAVDAAQAAIESISVEINDSTLKSPRDGRVQY-RVAQPGEVIAAGGRVLNLVDLGD-V 249

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREK---KFKAIIEKIDPIISQQDNNLQTQE 385
           Y+   +   Q   +  G    +               F A + +  P   + +   Q   
Sbjct: 250 YMTFFLPTAQAGQIAIGSDVRLVLDAVPQYVIPAKATFVADVAQFTPKTVETEEERQKLM 309

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +  V   I           ++ G P          
Sbjct: 310 F-RVKAHIPPELLRKYIQRVKTGLPGMAYIRLDPK 343


>gi|123966536|ref|YP_001011617.1| membrane fusion protein [Prochlorococcus marinus str. MIT 9515]
 gi|123200902|gb|ABM72510.1| possible membrane fusion protein [Prochlorococcus marinus str. MIT
           9515]
          Length = 353

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 92/246 (37%), Gaps = 32/246 (13%)

Query: 182 ENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
             ++S +        K+L + + +L +K  +        E  +YK   EL  N+ +QK+ 
Sbjct: 63  ATRTSNIGPRKQGIIKELKVKEGDLVKKGQILAT--LDDEDFIYKLE-ELELNLKKQKSQ 119

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                 LY E  +   +Y           +  +    +K +  +       I +P  G I
Sbjct: 120 YLRREFLYKEGAVSREDYESY--------KNNYNTSEAKFSDAKAEENFYLIKAPYPGKI 171

Query: 301 VYNQSFSSSNYAQQSQPLMK-------IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
              +      Y   S  L         I   S+   I AKV    I  +KKG  A+VR  
Sbjct: 172 TA-KYAEIGAYVTPSTNLSSDSKNKNFIFELSEGLEIIAKVPESDIGRIKKGQEASVRIE 230

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y   +     AI++KI     + +N       +EV LK  +++      E++ G  A++
Sbjct: 231 AYPSNKY---SAIVKKIAERAVKDNNVTS----FEVTLKFKEIS-----EEIKIGMTADL 278

Query: 414 LFTAKN 419
            F  K+
Sbjct: 279 EFKVKS 284



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 83/227 (36%), Gaps = 11/227 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  S+++SGE+        I     GIIK+ +V+ G  + +G  L T +D +    ++  
Sbjct: 51  LSESINTSGEVKATRTS-NIGPRKQGIIKELKVKEGDLVKKGQILATLDDEDFIYKLEEL 109

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++++K  +          +FL  +  V  + +ES +        K+    ++   Y I +
Sbjct: 110 ELNLKKQKSQYLRR----EFLYKEGAVSREDYESYKNNYNTSEAKFSDAKAEENFYLIKA 165

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK--NAVSQNDLN 217
            Y             Y+      +  S  +  +    + L ++  + E     + +    
Sbjct: 166 PYPGKITAKYAEIGAYVTPSTNLSSDSKNKNFIFELSEGLEIIAKVPESDIGRIKKGQEA 225

Query: 218 --QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             + E         + + I E+     ++     E  L+F    +EI
Sbjct: 226 SVRIEAYPSNKYSAIVKKIAERAVKDNNVTSF--EVTLKFKEISEEI 270


>gi|17989196|ref|NP_541829.1| exopolysaccharide production protein EXOF precursor [Brucella
           melitensis bv. 1 str. 16M]
 gi|17985051|gb|AAL54093.1| exopolysaccharide production protein exof precursor [Brucella
           melitensis bv. 1 str. 16M]
          Length = 392

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 77/221 (34%), Gaps = 14/221 (6%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+     +    + ++  +    R   + E    DF     +       +  + 
Sbjct: 128 VTAGMQLI--SAQQEYADLQMQITAQTIRRARFEAELKGTDFTYAVPEQ-----TAANKD 180

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++            +F+   +++    +    +  S       L+    L    +   Q+
Sbjct: 181 MVALTRHMVEGERTLFDMRRNNLAAERRALEAQAASYGDEITTLQQSIKLHDTEIQLLQE 240

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDE 250
           ++   K+L ++   +++ L   ER +  +  +       L      Q  + + I  L + 
Sbjct: 241 NVNSSKSLVDRGLAAKSSLRDMERDLSSTRRDALELASFLARARQNQLAVEQRIANLDET 300

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              E A+ L+EI  ++ + QR    ++  +  + K+  Q +
Sbjct: 301 RRSEAASSLQEIDLNMARMQRRSNSQLEAMAEIAKSSGQIS 341


>gi|163942303|ref|YP_001647187.1| hypothetical protein BcerKBAB4_4400 [Bacillus weihenstephanensis
           KBAB4]
 gi|163864500|gb|ABY45559.1| conserved hypothetical protein [Bacillus weihenstephanensis KBAB4]
          Length = 217

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 57  KLTDWKAEVGKNYNEN-----DKLGAVTVAGANGEQTVDVTIPQNATVVQSNA-TTNAFV 110

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    I  V+KG T  V    Y D         +E++  
Sbjct: 111 GAGSPIAYAF-DMSNLWVTANIEETNIDDVQKGQTVDVYVDAYPDTT---LTGKVEQVGL 166

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 167 TTANTFSMLPSSNATANYTKVKQVVPVKVSLDHSKSVNIVPGMNVSVRIH 216


>gi|294637258|ref|ZP_06715559.1| secretion protein HlyD family protein [Edwardsiella tarda ATCC
           23685]
 gi|291089562|gb|EFE22123.1| secretion protein HlyD family protein [Edwardsiella tarda ATCC
           23685]
          Length = 329

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 60/419 (14%), Positives = 113/419 (26%), Gaps = 107/419 (25%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIE---ISVSSSGEILNEDNVVEIKSPFSGIIK 68
             PAS   + L     II          +      V +        N+++I    SG++ 
Sbjct: 3   KSPASRTALFLAITSTIIIFGIHQYNQQLSTRHGVVRA--------NIIDITPQVSGLVT 54

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V +   + +G  L + +D +    +   + ++ N+                      
Sbjct: 55  QVNVRHNQTVKKGDLLFSIDDSDYKINVQNAQANLANV---------------------- 92

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                 E+QLL+      S  + + N            + + M+S +    +L+ +    
Sbjct: 93  ------EQQLLEQSAAVLSAKAALQNAQ---------SQYSYMQSNFQRISNLKQR---- 133

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                               N  S ND  Q E  +  S   +       +  +     L 
Sbjct: 134 --------------------NFASTNDYQQAETDLNVSKGNVATAQARLQQAIAARGALG 173

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D+     A        +L                      +  I +P  G I        
Sbjct: 174 DDNAQLLAAKASLAKAEL-------------------DLSRTHIYAPSNGKIATVNLN-V 213

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +YA+    L+  V  +   ++        I  ++ G  A V            +   ++
Sbjct: 214 GDYARPGNALLAEV-DTDNIWVEGAFPETVIAGIRVGDKAKVYLMA---DTHVAYHGHVQ 269

Query: 369 KI-DPIISQQDNNLQ-----TQEYYEVILKIT-----DLAFSDNNIELRNGFPAEVLFT 416
            I   I S++  N        Q +  V L         L    N      G  A V   
Sbjct: 270 SIGSAINSKELPNPGLLSELPQVFDWVRLAENVPVNIQLDPDSNMENFIPGLSATVDIV 328


>gi|256111687|ref|ZP_05452671.1| Polysaccharide export protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265993157|ref|ZP_06105714.1| Bme11 [Brucella melitensis bv. 3 str. Ether]
 gi|262764027|gb|EEZ10059.1| Bme11 [Brucella melitensis bv. 3 str. Ether]
          Length = 415

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 77/221 (34%), Gaps = 14/221 (6%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+     +    + ++  +    R   + E    DF     +       +  + 
Sbjct: 151 VTAGMQLI--SAQQEYADLQMQITAQTIRRARFEAELKGTDFTYAVPEQ-----TAANKD 203

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++            +F+   +++    +    +  S       L+    L    +   Q+
Sbjct: 204 MVALTRHMVEGERTLFDMRRNNLAAERRALEAQAASYGDEITTLQQSIKLHDTEIQLLQE 263

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDE 250
           ++   K+L ++   +++ L   ER +  +  +       L      Q  + + I  L + 
Sbjct: 264 NVNSSKSLVDRGLAAKSSLRDMERDLSSTRRDALELASFLARARQNQLAVEQRIANLDET 323

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              E A+ L+EI  ++ + QR    ++  +  + K+  Q +
Sbjct: 324 RRSEAASSLQEIDLNMARMQRRSNSQLEAMAEIAKSSGQIS 364


>gi|24112163|ref|NP_706673.1| hypothetical protein SF0745 [Shigella flexneri 2a str. 301]
 gi|32699843|sp|Q83S36|YBHG_SHIFL RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|24051001|gb|AAN42380.1| putative membrane protein [Shigella flexneri 2a str. 301]
          Length = 332

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 78/207 (37%), Gaps = 17/207 (8%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQR 271
           QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q + 
Sbjct: 128 QNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAKA 186

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++R
Sbjct: 187 SLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWVR 244

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEY 386
           A V  + +   + G    +   +     +K +   I  + P       + +  +L+T   
Sbjct: 245 AYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLV 301

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEV 413
           Y + + +TD   +     LR G P  V
Sbjct: 302 YRLRIVVTDADDA-----LRQGMPVTV 323



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 91/305 (29%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 52  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKAGVSVAQAQYDLMLAG 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y     + F      +++S  +    + +   +R   + 
Sbjct: 105 YRDEEIAQAAAAVKQAQAAYDYE----QNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 160 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 203

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 204 DSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 263

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 264 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 320

Query: 348 ATVRF 352
            TV+F
Sbjct: 321 VTVQF 325


>gi|323139263|ref|ZP_08074317.1| biotin/lipoyl attachment domain-containing protein [Methylocystis
           sp. ATCC 49242]
 gi|322395484|gb|EFX98031.1| biotin/lipoyl attachment domain-containing protein [Methylocystis
           sp. ATCC 49242]
          Length = 333

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 78/230 (33%), Gaps = 20/230 (8%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +  V   +F +  + L               +  I+    +L   L    S       L
Sbjct: 53  AELHVEAGSFVNEGDVLFQMSTSLLDNKRAEASARIAQAEATL-GNLEASVSRPEQISAL 111

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +      +A L   Q D +    LFEK  +S+        ++ +  +    +I   K   
Sbjct: 112 QAGVERAKAGLELSQNDYSRHSALFEKGVISK-------ALLERVAMARSRDIATVKEAE 164

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           RH+                  S +++  +    +   +   L+    ++ +++P++G + 
Sbjct: 165 RHVAAARISGR----------SSEIDAARAALQEAKIQRDELDIRIARQRVVAPVSGVVQ 214

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
               F +       QP++ ++P      +R  V+   +  VK G   T++
Sbjct: 215 EV-VFRAGEMVNAGQPVLTLLPPENR-SVRFFVSEASLSQVKLGERVTIK 262



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 78/195 (40%), Gaps = 12/195 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E + V +    +  I +  VE GS + +G  L       +T L+D K+          +
Sbjct: 37  VEGDFVYVAPSDAERIAELHVEAGSFVNEGDVLFQM----STSLLDNKRAEASARIAQAE 92

Query: 112 TEKSALDFLNNKYDVLE--KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                L+   ++ + +   +A   R +  L+     +S  S +F  G+ S     ++ + 
Sbjct: 93  ATLGNLEASVSRPEQISALQAGVERAKAGLELSQNDYSRHSALFEKGVISKALLERVAMA 152

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL---NQQERIVYKS 226
           R R I   +   E +  +  A +S    ++   +   ++  + +++L     ++R+V   
Sbjct: 153 RSRDIATVK---EAERHVAAARISGRSSEIDAARAALQEAKIQRDELDIRIARQRVVAPV 209

Query: 227 TLELRENIHEQKNML 241
           +  ++E +     M+
Sbjct: 210 SGVVQEVVFRAGEMV 224


>gi|229019793|ref|ZP_04176596.1| multidrug resistance protein A [Bacillus cereus AH1273]
 gi|228741518|gb|EEL91715.1| multidrug resistance protein A [Bacillus cereus AH1273]
          Length = 225

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 65  KLTDWKAEVGKNYNEN-----DKLGAVTVAGANGEQTVDVTIPQNATVVQSNA-TTNAFV 118

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    I  V+KG T  V    Y D         +E++  
Sbjct: 119 GAGSPIAYAF-DMSNLWVTANIEETTIDDVQKGQTVDVYVDAYPDTT---LTGKVEQVGL 174

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 175 TTANTFSMLPSSNATANYTKVKQVVPVKISLDHSKSVNIVPGMNVSVRIH 224


>gi|256829562|ref|YP_003158290.1| RND family efflux transporter MFP subunit [Desulfomicrobium
           baculatum DSM 4028]
 gi|256578738|gb|ACU89874.1| efflux transporter, RND family, MFP subunit [Desulfomicrobium
           baculatum DSM 4028]
          Length = 354

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 56/189 (29%), Gaps = 16/189 (8%)

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           V +  L       ++      + +                  +L+Q +       ++L  
Sbjct: 101 VARIDLSALGAARDRARANVQLADDQLRRRQALHAQGVLAREELDQARNELTSARTRLRE 160

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            E   E  T+ S + G +          +  +  P+  IV +     I   V    ++ +
Sbjct: 161 TEVEYEYGTVASTLEGVVNKVHVD-PGEFVAEGGPVADIV-NVATMRINFSVPEGDVRFL 218

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
            KG   TV    Y    E ++   I+ +                ++V + +      +  
Sbjct: 219 AKGQEVTVLVDTYP---EGRWTGTIDFVAWKADSATRT------FQVRVVVD-----NEG 264

Query: 403 IELRNGFPA 411
             +R G  A
Sbjct: 265 GMIRPGMIA 273


>gi|225628860|ref|ZP_03786894.1| exopolysaccharide biosynthesis protein Bme11 [Brucella ceti str.
           Cudo]
 gi|254699673|ref|ZP_05161501.1| Polysaccharide export protein [Brucella suis bv. 5 str. 513]
 gi|254706072|ref|ZP_05167900.1| Polysaccharide export protein [Brucella pinnipedialis M163/99/10]
 gi|254711630|ref|ZP_05173441.1| Polysaccharide export protein [Brucella pinnipedialis B2/94]
 gi|254712243|ref|ZP_05174054.1| Polysaccharide export protein [Brucella ceti M644/93/1]
 gi|254715314|ref|ZP_05177125.1| Polysaccharide export protein [Brucella ceti M13/05/1]
 gi|256015200|ref|YP_003105209.1| exopolysaccharide biosynthesis protein Bme11 [Brucella microti CCM
           4915]
 gi|256029736|ref|ZP_05443350.1| Polysaccharide export protein [Brucella pinnipedialis M292/94/1]
 gi|256157889|ref|ZP_05455807.1| Polysaccharide export protein [Brucella ceti M490/95/1]
 gi|256253151|ref|ZP_05458687.1| Polysaccharide export protein [Brucella ceti B1/94]
 gi|260167175|ref|ZP_05753986.1| exopolysaccharide biosynthesis protein Bme11 [Brucella sp. F5/99]
 gi|261217044|ref|ZP_05931325.1| polysaccharide export protein [Brucella ceti M13/05/1]
 gi|261220256|ref|ZP_05934537.1| Bme11 [Brucella ceti B1/94]
 gi|261313509|ref|ZP_05952706.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261319254|ref|ZP_05958451.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261319914|ref|ZP_05959111.1| polysaccharide export protein [Brucella ceti M644/93/1]
 gi|261750137|ref|ZP_05993846.1| polysaccharide biosynthesis/export protein [Brucella suis bv. 5
           str. 513]
 gi|261756578|ref|ZP_06000287.1| polysaccharide export protein [Brucella sp. F5/99]
 gi|265986747|ref|ZP_06099304.1| Bme11 [Brucella pinnipedialis M292/94/1]
 gi|265996398|ref|ZP_06108955.1| Bme11 [Brucella ceti M490/95/1]
 gi|294853771|ref|ZP_06794443.1| polysaccharide export outer membrane protein [Brucella sp. NVSL
           07-0026]
 gi|225616706|gb|EEH13754.1| exopolysaccharide biosynthesis protein Bme11 [Brucella ceti str.
           Cudo]
 gi|255997860|gb|ACU49547.1| exopolysaccharide biosynthesis protein Bme11 [Brucella microti CCM
           4915]
 gi|260918840|gb|EEX85493.1| Bme11 [Brucella ceti B1/94]
 gi|260922133|gb|EEX88701.1| polysaccharide export protein [Brucella ceti M13/05/1]
 gi|261292604|gb|EEX96100.1| polysaccharide export protein [Brucella ceti M644/93/1]
 gi|261298477|gb|EEY01974.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261302535|gb|EEY06032.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261736562|gb|EEY24558.1| polysaccharide export protein [Brucella sp. F5/99]
 gi|261739890|gb|EEY27816.1| polysaccharide biosynthesis/export protein [Brucella suis bv. 5
           str. 513]
 gi|262550695|gb|EEZ06856.1| Bme11 [Brucella ceti M490/95/1]
 gi|264658944|gb|EEZ29205.1| Bme11 [Brucella pinnipedialis M292/94/1]
 gi|294819426|gb|EFG36426.1| polysaccharide export outer membrane protein [Brucella sp. NVSL
           07-0026]
          Length = 415

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 77/221 (34%), Gaps = 14/221 (6%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+     +    + ++  +    R   + E    DF     +       +  + 
Sbjct: 151 VTAGMQLI--SAQQEYADLQMQITAQTIRRARFEAELKGTDFTYAVPEQ-----TAANKD 203

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++            +F+   +++    +    +  S       L+    L    +   Q+
Sbjct: 204 MVALTRHMVEGERTLFDVRRNNLAAERRALEAQAASYGDEITTLQQSIKLHDTEIQLLQE 263

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDE 250
           ++   K+L ++   +++ L   ER +  +  +       L      Q  + + I  L + 
Sbjct: 264 NVNSSKSLVDRGLAAKSSLRDMERDLSSTRRDALELASFLARARQNQLAVEQRIANLDET 323

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              E A+ L+EI  ++ + QR    ++  +  + K+  Q +
Sbjct: 324 RRSEAASSLQEIDLNMARMQRRSNSQLEAMAEIAKSSGQIS 364


>gi|168702256|ref|ZP_02734533.1| efflux transporter, RND family, MFP subunit [Gemmata obscuriglobus
           UQM 2246]
          Length = 456

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/326 (10%), Positives = 91/326 (27%), Gaps = 30/326 (9%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +  E + + F+  K         +  + L                  ++     L     
Sbjct: 129 VAAEITEVYFVEGKRVKKGDRLATLLDHLYANRHNTEVASVAAAEAQVTRAEAGLIGAAA 188

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++  +       E + +   AL     KD    +       +S  D  + +     +  +
Sbjct: 189 KVAKVKSALASAEARLTRAIALQGRATKDFEQAQQQRVGGGISLQDYQRFDADKQAADAD 248

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                 + +   R I     ++    A             +   +   ++     +  E 
Sbjct: 249 RVAAEADIQAAKREIEAAEADSKTADATVRS--------AKADLSAAKARCDEARRLVEN 300

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQ-----SQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
             + +PI GTI+  +S              +  +  I        +   V  +Q+  ++ 
Sbjct: 301 CVVTAPIDGTILT-KSADKGALVSPNSFNVAAGICLIA-DLAKLEVEIDVPERQVTKIRP 358

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF-SDNNI 403
           G    ++     +   +    +++++ PI     N ++      +   +      +D + 
Sbjct: 359 GQRCKLQADADPNREYR---GVVDRVMPIADDTKNVVKV----RIRAYLAKDELDNDRDA 411

Query: 404 ELRNGFPAEVLFTAKNTTLAQEIIHP 429
            L+              T+ + +  P
Sbjct: 412 FLKPKMSVTA-------TVYESLFEP 430


>gi|220915368|ref|YP_002490672.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219953222|gb|ACL63606.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 380

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 65/202 (32%), Gaps = 8/202 (3%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L  +     A +     +      L  +  +  + L    R  + +    +  +   ++ 
Sbjct: 77  LRAEVGGAVAEVRVDAGERVKSGQLLAR--IDASALQDAVRAAHSAVTSAQNALRVAESG 134

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            R  + L  E  +   +  +     LE  +    D  ++L   E+   +  + +P AG +
Sbjct: 135 ARRAHTLAREGAMAEQDAER-ADAQLEAARAQVEDAKARLAAAEQQAGKTAVRAPFAG-V 192

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V  +S SS +       L  ++           V    +  +  G         +   R 
Sbjct: 193 VSERSVSSGDVVASGAALYTVI-DPSRLQFEGSVPAASVGALVPGAPVDFSVTGFGGRR- 250

Query: 361 KKFKAIIEKIDPIISQQDNNLQ 382
             F   IE+++P +      ++
Sbjct: 251 --FDGHIERVNPAVDPSTGQVR 270



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 35/99 (35%), Gaps = 3/99 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA---LDFL 120
            G + + +V+ G ++  G  L   +     D +     ++ + +  +   +S       L
Sbjct: 82  GGAVAEVRVDAGERVKSGQLLARIDASALQDAVRAAHSAVTSAQNALRVAESGARRAHTL 141

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +  + E+  E  + QL     +     +++      +
Sbjct: 142 AREGAMAEQDAERADAQLEAARAQVEDAKARLAAAEQQA 180


>gi|150375923|ref|YP_001312519.1| RND family efflux transporter MFP subunit [Sinorhizobium medicae
           WSM419]
 gi|150030470|gb|ABR62586.1| efflux transporter, RND family, MFP subunit [Sinorhizobium medicae
           WSM419]
          Length = 384

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 58/213 (27%), Gaps = 18/213 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V   D     R    S L   + +           +L++++    A  L + +   +Q  
Sbjct: 98  VDATDYQLAVRSAEASLLAAEKQVQTTGLAKLRAEQLFNKSFSSQAQ-LDQATLLYDQAV 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            T     S L+  +       + +   G +    +           P++  V       +
Sbjct: 157 STRDAAASSLSQAKNQVNYTDLKADQNGIVTDVNAD-IGQVVGTGTPVVT-VAVDGEKEV 214

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V    I   + G     RF     +        + ++      +         + V 
Sbjct: 215 EVAVPEIDIAEFRPGKPVQARFWSDDML---VLDGHVREVSGSADPRSRT------FSVR 265

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           + +        +  +  G  A V  TA ++   
Sbjct: 266 VGL------PKDERVLLGMTATVEATAGSSAPL 292



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 29/102 (28%), Gaps = 2/102 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I +  V  G ++  G  L+  +  +    +   + S+      + T  + L  L  +
Sbjct: 75  GGKITERLVNIGDRVEPGDVLVRVDATDYQLAVRSAEASLLAAEKQVQT--TGLAKLRAE 132

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
               +      +      L     +        +S     + 
Sbjct: 133 QLFNKSFSSQAQLDQATLLYDQAVSTRDAAASSLSQAKNQVN 174


>gi|296163475|ref|ZP_06846223.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
           Ch1-1]
 gi|295886275|gb|EFG66145.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
           Ch1-1]
          Length = 377

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 72/233 (30%), Gaps = 21/233 (9%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            R+++ ++ S     +   + D      L  +  +  +D+    R    +       + +
Sbjct: 79  QRVEVASRLSGYIRDMLVQEGDRVRRGQLLTR--LDASDVEGGIRQGQAAGGAAEAALRD 136

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +  L     L++  ++   N L+++    E  +       + L      R    I SP+
Sbjct: 137 AQIDLERFQRLFERGSVS-DNELRKVRLKFEAAREARNQARAGLDTALAQRAYAEITSPV 195

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +V     +  + A    PL+ +    +       V   Q+  +  G    V      
Sbjct: 196 DGVVVARHKRT-GDLALPGMPLLTL-ESGRGLLFETFVAEGQVAAIAAGQPVQVNIDGVP 253

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                  K  + ++         +      Y+V + + + A       L  G 
Sbjct: 254 A----ALKGTVSRVVRSGDPVSRS------YQVKITLPETA------GLMPGM 290



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 5/130 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S   P+E +   S   +  D  VE+ S  SG I+   V+ G ++ +G  L   +  +   
Sbjct: 62  SAGAPLEYTAVGS---VVSDQRVEVASRLSGYIRDMLVQEGDRVRRGQLLTRLDASDVEG 118

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            I   + +       +    + +D    +      +    E + +    +          
Sbjct: 119 GIRQGQAAGGAAEAAL--RDAQIDLERFQRLFERGSVSDNELRKVRLKFEAAREARNQAR 176

Query: 155 YGISSVYRSL 164
            G+ +     
Sbjct: 177 AGLDTALAQR 186


>gi|326795349|ref|YP_004313169.1| efflux transporter RND family, MFP subunit [Marinomonas
           mediterranea MMB-1]
 gi|326546113|gb|ADZ91333.1| efflux transporter, RND family, MFP subunit [Marinomonas
           mediterranea MMB-1]
          Length = 370

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 57/166 (34%), Gaps = 10/166 (6%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           +++V   T  L+ NI + + +++    EL     L+  N   +++  L Q +   A   +
Sbjct: 114 QKLVAFDTRSLKANISQARALVKQRKIELDGIKRLKRNNLTSQVT--LAQAETDLASAQA 171

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            L   +   E   I +P AG +          Y      ++ +V       ++  +    
Sbjct: 172 TLKSYQINLENAIITAPFAGIVNTVNV-EKGQYVAVGSGILDLV-SVDPITVKVNLPQAH 229

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +  V  G  A V  P             +E +  + +     L  +
Sbjct: 230 LSKVAVGTIADVALP-----NGTHASGQVEYVSRVANNATRTLPVE 270



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 39/124 (31%), Gaps = 4/124 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
            D    + +  +G + +  V  G  +  G  L+ F+       I   +  +K  +  +D 
Sbjct: 85  SDKSQVLVNAIAGKVSELTVLKGDYVKAGQKLVAFDTRSLKANISQARALVKQRKIELD- 143

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
               +  L       +      E  L        S    + N  I++ +  +   +   +
Sbjct: 144 ---GIKRLKRNNLTSQVTLAQAETDLASAQATLKSYQINLENAIITAPFAGIVNTVNVEK 200

Query: 173 SIYL 176
             Y+
Sbjct: 201 GQYV 204


>gi|212709686|ref|ZP_03317814.1| hypothetical protein PROVALCAL_00734 [Providencia alcalifaciens DSM
           30120]
 gi|212687497|gb|EEB47025.1| hypothetical protein PROVALCAL_00734 [Providencia alcalifaciens DSM
           30120]
          Length = 369

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 68/194 (35%), Gaps = 14/194 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++  V ++G++     V ++ +  SG ++   V+ G  + +G  L   +  +  + +   
Sbjct: 45  LDKQVLATGKLDAVRKV-DVGAQVSGQLQALYVKEGDTVKKGDLLAVIDPQKAQNEVTES 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKV--FN 154
           + +I  L  ++   ++ L      Y     L K      ++L           +KV  + 
Sbjct: 104 QETIHELESNLALAQAELKLAQVTYQRHLSLSKVQAVSRQELDKARTDVEVNKAKVATYQ 163

Query: 155 YGISSVYRSLKMKLTRMR--SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE----- 207
             I     SL    T ++   I      +      L+       ++   +  L +     
Sbjct: 164 SQIKRNRASLDTAKTNLKYTQITAPMDGIVTFIKTLQGQTVIAAQEAPTILTLADLDTML 223

Query: 208 -KNAVSQNDLNQQE 220
            K  VS+ D+   E
Sbjct: 224 VKAEVSEADVIYLE 237



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 80/212 (37%), Gaps = 17/212 (8%)

Query: 212 SQNDLNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQN 269
           SQ  +++ E  +  +  EL+   +  Q+++     +      L+ A    E++   +   
Sbjct: 103 SQETIHELESNLALAQAELKLAQVTYQRHLSLSKVQAVSRQELDKARTDVEVNKAKVATY 162

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKL 327
           Q       + L   +   +   I +P+ G + + ++          +   ++ +      
Sbjct: 163 QSQIKRNRASLDTAKTNLKYTQITAPMDGIVTFIKTLQGQTVIAAQEAPTILTLA-DLDT 221

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++A+V+   + +++ G +A+  F        KKF   ++     I      +    +Y
Sbjct: 222 MLVKAEVSEADVIYLEPGQSAS--FTVLGAPD-KKFAGKLK----DILPTPEKINDAIFY 274

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               ++ +     + ++L+    A+V+   ++
Sbjct: 275 YARFEVPNP---QHLLKLQ--MTAQVVIELES 301


>gi|153000043|ref|YP_001365724.1| secretion protein HlyD family protein [Shewanella baltica OS185]
 gi|151364661|gb|ABS07661.1| secretion protein HlyD family protein [Shewanella baltica OS185]
          Length = 384

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 61/179 (34%), Gaps = 3/179 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E + + + +P   +I +  V  G Q+  G  LLT +       + L++  ++  +  +
Sbjct: 86  TVERDRLTLIAPVGELITQVNVVEGQQVKAGEVLLTLDSTSANARLALRQAELEQAKAKL 145

Query: 111 --DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF-NYGISSVYRSLKMK 167
                 + L+ +     VL+ A  S +E    F        +KV     + +   +    
Sbjct: 146 SEAVTGARLEDIERAKAVLDGANASVKEAQRAFERTNRLYATKVLSQADLDTARAARDTS 205

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           L +      +   LEN +   +   +             E+ A++   L      V  +
Sbjct: 206 LAKQAEAEQSLRLLENGTRSEQLEQAKAAVAAASASVAIEQKALADLSLVAARDAVVDT 264



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 87/307 (28%), Gaps = 37/307 (12%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           + +  L  + +V+E       E LL       +    +    +      L   +T  R  
Sbjct: 96  APVGELITQVNVVEGQQVKAGEVLLTLDSTSANARLALRQAELEQAKAKLSEAVTGARLE 155

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            + R   +       A +   Q+       L+    +SQ DL+        S  +  E  
Sbjct: 156 DIERA--KAVLDGANASVKEAQRAFERTNRLYATKVLSQADLDTARAARDTSLAKQAEAE 213

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              + +                      S  LEQ +   A   + + I +K     ++++
Sbjct: 214 QSLRLLENGTR-----------------SEQLEQAKAAVAAASASVAIEQKALADLSLVA 256

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
                +         +       L+ ++      Y+R  +    +  VK G    +R   
Sbjct: 257 ARDAVVDTLPWR-VGDRIAAGTQLIGLLASEDP-YVRVYLPATWLDRVKAGDKVNIRVDG 314

Query: 355 YADIREKKFKAIIEKI------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
               RE      +  I       P  +  + +     Y      +TD+  S    +L  G
Sbjct: 315 ----REIPIAGTVRNIRSQPAYTPFYALNERDRARLMY------LTDITISAEGQDLPTG 364

Query: 409 FPAEVLF 415
               V  
Sbjct: 365 MALAVEL 371


>gi|332186521|ref|ZP_08388265.1| hlyD secretion family protein [Sphingomonas sp. S17]
 gi|332013504|gb|EGI55565.1| hlyD secretion family protein [Sphingomonas sp. S17]
          Length = 393

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 82/290 (28%), Gaps = 29/290 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L+    + +    +     +++   +L        S   +    +   +   A L   
Sbjct: 118 QPLVRIDDRIYRQRVEQATAQVAAQEATLANSRQAQASRAASLSAQDAAVANAEAQLMRA 177

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q D+  + +L    +VS      +ER    + L   +    Q    R I +         
Sbjct: 178 QADMARVNDLVTDGSVSL-----RERDQTLAALRQAQAALRQAKAAREIAQ--------- 223

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              ++ +       Q   +   +   + +       + +P  G +          Y    
Sbjct: 224 -QDVRTVVVGRGGQQAGVSGAEAARRLAQIDLANTVVRAPENGRLSEVGVR-LGQYVTAG 281

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--- 372
             LM +VP        A     Q   +  G  A+      A+ R    K  +E+I P   
Sbjct: 282 SQLMFLVPPETWVI--ANFKEAQTARMAVGQPASFTVDGLANAR---LKGHVERISPAAG 336

Query: 373 -----IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                + S       T+    + ++I           LR G   +     
Sbjct: 337 SEFAVLKSDNATGNFTKVPQRIAVRIRVDPGQPLAARLRPGMSVQASVDT 386


>gi|327539320|gb|EGF25941.1| family protein-putative secreted protein [Rhodopirellula baltica
           WH47]
          Length = 268

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 88/239 (36%), Gaps = 33/239 (13%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E K + L A    + KD    + L    A S  +L ++    Y    E+++ + E    L
Sbjct: 59  EEKEAQLNAANEVNLKDARNNEELARAEAESFRELYEKGATPYY---EMKKKVLEAIRAL 115

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I+             L E+ + + + Q  +  + S+  I E   +++ I +   G I 
Sbjct: 116 LRID-------------LAEMQKKIAEAQ--YIAKRSEREIAEFELDRRRITALFDGYI- 159

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTY---IRAKVTPKQIQHVKKGYTATVR-FPHYAD 357
             +      + Q   P+  +V   ++     I A  +      V  G    VR F     
Sbjct: 160 EMRIAQLGEWVQPGSPIATLVQLDRVRVGGDIDALASN---GAVHAGAPVLVRVFNTADP 216

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +  + +A +  +   +         Q+ Y + + + +   S+ N  ++ G  AE++F 
Sbjct: 217 DQNFEVRAPLGFVSSEVD-------GQKRYRIWVDVDNQKDSNGNWMIKPGMEAEIIFQ 268



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 44/139 (31%), Gaps = 6/139 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  +E G  + +   L   +D      ++ KK   K  + +   E +  D  NN+ 
Sbjct: 22  GKLVELPIEEGMTVAKDDLLALVDDTSARLALEFKKAEEKEAQLNAANEVNLKDARNNEE 81

Query: 125 DVLEKAFESRE------EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               +A   RE          +   K       +    ++ + + +       +      
Sbjct: 82  LARAEAESFRELYEKGATPYYEMKKKVLEAIRALLRIDLAEMQKKIAEAQYIAKRSEREI 141

Query: 179 LDLENKSSLLRALLSSHQK 197
            + E     + AL   + +
Sbjct: 142 AEFELDRRRITALFDGYIE 160


>gi|281207953|gb|EFA82132.1| hypothetical protein PPL_05037 [Polysphondylium pallidum PN500]
          Length = 1191

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 79/220 (35%), Gaps = 12/220 (5%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-----IDTEKSALDFLNNKYDVLEKAFE 132
           + Q   L   +         LK    +  R       +  E+     L  +   L++A +
Sbjct: 238 VEQDRLLKLLDQEREQHQKALKAAQEQEQRDRQFAEKLQKEQEEAAKLEAERTALKQALQ 297

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             E +      +     ++     +    +  +    + R     + +L  +   L A  
Sbjct: 298 KHESERKKLEEQAEQAKAQKEKIDLEMKKKQEEEIEKQKRIFEKQQKELIEQQIALEA-- 355

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              QK+L   K L   +   Q  L + +  +      L+ N  E++ M +H  EL  +  
Sbjct: 356 -KRQKELEHNKELLRLHDSDQRQLEELKNKLDL----LQRNQSEEEMMKKHEIELKRQNE 410

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           LE   +++E+ R   + Q+  A E+  +   ++  E++ +
Sbjct: 411 LELVKHIEELERQKVELQKLQALELDIIQREKEKLEKELV 450



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 71/213 (33%), Gaps = 24/213 (11%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +I  +K++ +  R     E+ AL+        +E+  E RE++ L  L +      
Sbjct: 167 RHQQMIQQQKIAAEKERA----ERDALEQKRLDLQRVEQ--ERREKERLVLLMREQELIK 220

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +          R  + ++ + R + L   + E     L+A     Q+D    + L ++  
Sbjct: 221 QEEEKQRQEQERKRREQVEQDRLLKLLDQEREQHQKALKAAQEQEQRDRQFAEKLQKE-- 278

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN--------------LEFA 256
             Q +  + E         L+++  E+K +     +   +                 +  
Sbjct: 279 --QEEAAKLEAERTALKQALQKHESERKKLEEQAEQAKAQKEKIDLEMKKKQEEEIEKQK 336

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++  ++L + Q     +  K     K   +
Sbjct: 337 RIFEKQQKELIEQQIALEAKRQKELEHNKELLR 369


>gi|255012954|ref|ZP_05285080.1| putative hemolysin secretion transport system membrane protein
           [Bacteroides sp. 2_1_7]
 gi|255013182|ref|ZP_05285308.1| putative hemolysin secretion transport system membrane protein
           [Bacteroides sp. 2_1_7]
          Length = 123

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 41/122 (33%), Gaps = 11/122 (9%)

Query: 312 AQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
               +    +VP  +     + ++   +   V++G  A VRF ++ D        ++  I
Sbjct: 2   IPSGEVAFTVVPQGEGRLVGKVRIPIARSGKVRRGQRAIVRFSNFPDQEFGVVNGVVSNI 61

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL--RNGFPAEVLFTAKNTTLAQEIIH 428
             + + +        YY   +   +   ++  I+L       A      +   L +    
Sbjct: 62  SLVPTDE--------YYTADIDFPEGLRTNYGIDLPVSPETQASAEIVTEELRLIERFFL 113

Query: 429 PI 430
           PI
Sbjct: 114 PI 115


>gi|223935247|ref|ZP_03627165.1| secretion protein HlyD family protein [bacterium Ellin514]
 gi|223896131|gb|EEF62574.1| secretion protein HlyD family protein [bacterium Ellin514]
          Length = 317

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 66/163 (40%), Gaps = 2/163 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P   SV+ +G I      V+I +P  G+I+K   + GS++ QG P++  +  E    + 
Sbjct: 41  SPYTNSVAGTGIIEASRENVKIGAPKGGLIQKVNAQIGSKVKQGDPVIQLDSREACAQLV 100

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  ++ ++  + +EK  L    +++   +   +     + +   K  +  S      +
Sbjct: 101 TMEAQLEAMKASLQSEKVLLADNEDQFTRTDNLAKQNVASVDERNRKEFALRS--MQARV 158

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
           + +   +K    ++     N   L  ++     +L  + ++  
Sbjct: 159 AKIEADIKAVAAQVELAKTNIDILTVRAPRDGTILQVNVREGE 201



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 23/246 (9%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN---IHEQKNML 241
              + A + S  K    +  L  + A +Q  L   E  +      L+     + + ++  
Sbjct: 70  IQKVNAQIGSKVKQGDPVIQLDSREACAQ--LVTMEAQLEAMKASLQSEKVLLADNEDQF 127

Query: 242 RHINELYDEANLEFANY------LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
              + L  +              L+ +   + + +       +++ + +   +  T+ +P
Sbjct: 128 TRTDNLAKQNVASVDERNRKEFALRSMQARVAKIEADIKAVAAQVELAKTNIDILTVRAP 187

Query: 296 IAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
             GTI+         YA    ++PLM I+  ++   IRA V  +    V     A     
Sbjct: 188 RDGTILQVNVR-EGEYAGTTPTEPLM-ILGETEKLQIRADVDEQNAPLVAANQPAI---- 241

Query: 354 HYADIREK-KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL--AFSDNNIELRNGFP 410
            +     K        +I+P +  +  +L       V  ++  +   F      L  G  
Sbjct: 242 AFLKGDTKNPIPLRFVRIEPYVVPK-RSLTGDSAERVDTRVLQIIFEFDRPTTPLYVGQQ 300

Query: 411 AEVLFT 416
            +V   
Sbjct: 301 MDVFIQ 306


>gi|170594007|ref|XP_001901755.1| Myosin tail family protein [Brugia malayi]
 gi|158590699|gb|EDP29314.1| Myosin tail family protein [Brugia malayi]
          Length = 1986

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 70/188 (37%), Gaps = 1/188 (0%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E  D  + +  S++  R  +  E        +K +    + + +++ + D   +      
Sbjct: 1418 EALDAANSRINSLEKTRLRLAQELEDAQIDADKANSFANSLDKKQK-VFDKTVEEWKRKC 1476

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             +    + +  R ++   T    +     +   +   LR       ++L  + +   +  
Sbjct: 1477 DMLTQELEASQREVRGATTEAFRLRSTVEETAEQVETLRRENKVLTEELKDVTDQLGEGG 1536

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             S ++L +Q+R +     EL++ + + ++ L         A +E +    EI + + + +
Sbjct: 1537 KSLHELQKQKRKLEMEKNELQQALDDAESALEIEENKVLRAQIEISQIRSEIEKRITEKE 1596

Query: 271  RTFADEMS 278
              F +  +
Sbjct: 1597 EEFQNTRN 1604



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 75/214 (35%), Gaps = 15/214 (7%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA---FESREEQLLDFLGKY 145
            +++    I   + +++ L+  I+ E+   D L  + +V+E+     +S +E+L D L + 
Sbjct: 1652 NVDAQKTIKRHQDNVRELQTQIEDEQRQRDELREQMNVIERRIQILQSEKEELSDTLEQA 1711

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      + +  ++        S+   +  LE++   L + L+    +L      
Sbjct: 1712 ERNRRQTEQEA-ADIKEAVNSLTQSNYSLSATKRKLESEIQQLHSELNETFNELKNTDER 1770

Query: 206  FEKNAVSQNDLNQ-----------QERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             +K  +    L +            ER       +++E      ++     +       +
Sbjct: 1771 CKKAVMDAGKLAEELQTEQEHSQNLERQRKGLESQMKEMQARLDDVETTALKDGKRILTK 1830

Query: 255  FANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                + ++  +L    R  A+ +      E+   
Sbjct: 1831 LDQRVHDLEIELADECRRHAETLKNYRNRERKVR 1864


>gi|149918307|ref|ZP_01906798.1| secretion protein HlyD [Plesiocystis pacifica SIR-1]
 gi|149820833|gb|EDM80242.1| secretion protein HlyD [Plesiocystis pacifica SIR-1]
          Length = 385

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 14/242 (5%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +S    +      L  A  + ++Q      +       V    ++ V R       R+ 
Sbjct: 3   RRSRSTLVALLAVALACACSTTDDQAPTPEPERDDAPLGVARVRVAPVERCRVDASARIH 62

Query: 173 SIYLNRLDLE------NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
               +R +L        +   L   + +  +   ++  L +++  ++       R     
Sbjct: 63  GQIEDRSELSLAFALPGRVRSLEVEVGATVEAGQLLARLDDQDLRARAAAASSGR----- 117

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             EL E   EQ       +EL        A   +  +  L Q +       S+       
Sbjct: 118 --ELAEEGREQAARELERSELLASRRSLGAATAERTASSLRQAEAQVELARSEARAARSM 175

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                + +P+AG +    +          QP+++I P      +RA+V    +   + G 
Sbjct: 176 LRHGRLEAPVAGVVAELHTR-RGEVVGAGQPILRIEPSEPRRTVRARVPEHLLGRFEVGA 234

Query: 347 TA 348
             
Sbjct: 235 RV 236



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 35/119 (29%), Gaps = 3/119 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK---KVSIKNLRCHIDTEKSALDFLN 121
           G ++  +VE G+ +  G  L   +D +           +   +  R     E    + L 
Sbjct: 79  GRVRSLEVEVGATVEAGQLLARLDDQDLRARAAAASSGRELAEEGREQAARELERSELLA 138

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           ++  +     E     L     +     S+         +  L+  +  + +    R  
Sbjct: 139 SRRSLGAATAERTASSLRQAEAQVELARSEARAARSMLRHGRLEAPVAGVVAELHTRRG 197


>gi|254515661|ref|ZP_05127721.1| efflux transporter, RND family, MFP subunit [gamma proteobacterium
           NOR5-3]
 gi|219675383|gb|EED31749.1| efflux transporter, RND family, MFP subunit [gamma proteobacterium
           NOR5-3]
          Length = 416

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 82/227 (36%), Gaps = 11/227 (4%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT-------DLIDLKKVS 102
           I+     V + +   G +++  VE G  + QG PLL   +             +  +  +
Sbjct: 65  IVEPGRSVYLDAIEGGRVERLLVEEGVIVSQGQPLLELSNTTLQLDVIGREAEVSEQLNN 124

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           ++N    I+  + +L     + D          ++  +  GK   + ++  +      Y 
Sbjct: 125 LRNTELAIEQNRLSLKSDLVEIDYQMVRLGRLVKRYKELEGKEFISRNEYEDAVDELDYW 184

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV--SQNDLNQQE 220
           S K +LT        R+ +  +   LRA +S  +++L + ++  +   V   +  L    
Sbjct: 185 SKKRELTLASQAQDERIRI-AQMQQLRASVSQLEQNLILARSNLDNLLVVAPRGGLLSSF 243

Query: 221 RIVYKSTLELRENIHEQKNMLR-HINELYDEANLEFANYLKEISRDL 266
                 +    E + +  ++ R     L +E  L      ++   +L
Sbjct: 244 NAEVGESKARGERLGQIDDVDRFKATALVNEFYLNRVRVGQQARLEL 290


>gi|149280159|ref|ZP_01886283.1| possible membrane-fusion protein [Pedobacter sp. BAL39]
 gi|149229173|gb|EDM34568.1| possible membrane-fusion protein [Pedobacter sp. BAL39]
          Length = 411

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 75/229 (32%), Gaps = 32/229 (13%)

Query: 204 NLFEKNAVSQNDLN---------QQERIVYKSTLELRENIHEQKNMLRHINE---LYDEA 251
            L + + VS+  +          Q ++   +S  +L     E K       +        
Sbjct: 103 PLLQGSIVSKGQVIAVLQNQEFVQLQQDYLESKSQLELTDAEYKRQQTLAQQNVNAQKTV 162

Query: 252 NLEFANYLKEISRDLEQNQR-TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
               + YL  ++R+    QR    + +         R Q  I +PI+G +      +   
Sbjct: 163 QQAKSQYLSNLARENALKQRLQLINIIPASLTASNIRSQVNIYAPISGYVTKVNVNT-GK 221

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +   +  + +IV +S   ++   V  K    VK G    VRF    D  E+   A+++ +
Sbjct: 222 FVSPNDVMFEIV-NSSNLHVELNVFEKDAAKVKAGQ--RVRFTMTNDTTEQM--AVVQLV 276

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              I+                 +T  A +  +     G   + L    +
Sbjct: 277 GREINPDKT-------------VTVHAVAKGSKGFIPGTYLKALIETGS 312



 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 1/102 (0%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   N+V + +   GIIK   +  GS + +G  +   ++ E   L      S   L    
Sbjct: 83  VPPQNLVSVTTQMGGIIKSTPLLQGSIVSKGQVIAVLQNQEFVQLQQDYLESKSQLEL-T 141

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           D E      L  +    +K  +  + Q L  L + ++   ++
Sbjct: 142 DAEYKRQQTLAQQNVNAQKTVQQAKSQYLSNLARENALKQRL 183


>gi|188576391|ref|YP_001913320.1| cation efflux system protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520843|gb|ACD58788.1| cation efflux system protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 371

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 72/197 (36%), Gaps = 19/197 (9%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L        K+   L++   E       +      A        ++     + + R  +
Sbjct: 116 ELATAYSDAGKARATLQQARLELARQ--KVLAADSIAAARDLQAAQQAFDSAQNDARAAS 173

Query: 275 DEMSKLTILEK--TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           D +++L +  +  +  +  + +PIAG +V   +     +   S PLM  V      ++ A
Sbjct: 174 DRLAQLGVAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMT-VADISQVWLTA 232

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  ++I  V +G   T     Y     + F   ++ +D ++      L      +V + 
Sbjct: 233 SVPEREIGQVFEGQQVTASLDAYP---GQHFTGQVQHLDDLLDPTTRTL------KVRV- 282

Query: 393 ITDLAFSDNNIELRNGF 409
               A ++++  L+ G 
Sbjct: 283 ----ALNNHDGLLKPGM 295



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 46/143 (32%), Gaps = 10/143 (6%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +L E  V  +  P +G +       G  +L G  L   +        +L        +  
Sbjct: 76  VLPERLVRVV-PPLAGRVVALPKTLGDTVLAGDVLCVLD------SAELATAYSDAGKAR 128

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
              +++ L+    K    +    +R+ Q            ++  +  ++ +  + +    
Sbjct: 129 ATLQQARLELARQKVLAADSIAAARDLQAAQQAFDSAQNDARAASDRLAQLGVAAQATSH 188

Query: 170 RMRSIYLNRLDLENKSSLLRALL 192
           R    Y+ R  +  +   L A L
Sbjct: 189 RR---YVLRAPIAGRVVDLSAAL 208


>gi|163850596|ref|YP_001638639.1| hypothetical protein Mext_1166 [Methylobacterium extorquens PA1]
 gi|163662201|gb|ABY29568.1| hypothetical protein Mext_1166 [Methylobacterium extorquens PA1]
          Length = 584

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/388 (12%), Positives = 123/388 (31%), Gaps = 25/388 (6%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEI 59
           M      +   +    L R++ + +  ++  LI  S+L P+      S   +    V  +
Sbjct: 1   MSQPTLTSAPEHRHGRLVRVSSVGLASVLAILIGTSVLPPL--VADQSDRAVVNAPVTLL 58

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-SIKNLRCHIDTEKSALD 118
            +P +G I    V  G ++ +G+ +    +        ++    +  LR      ++   
Sbjct: 59  TAPIAGDIGAIPVTAGDKVERGSLVAQITNDRLDRATAIQLAGRVSELRERALAAENKRT 118

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +++A   +  Q++  L               +S      +   ++  +  + 
Sbjct: 119 SNEAYLAAIDRAIRDQSAQMMQVLRSQVEELKAKIASANASGEEKRVLMERQVGMVARDV 178

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
              +   S  +A  ++ Q+       L +K       L    R ++    +   ++ +  
Sbjct: 179 ASPDMVKSTTQAFNAAIQEKKAAEAKLNQK----TVQLEGLARGLF--LGDELRSLADLS 232

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                I        +E     KE+   +   Q     E  +L           I +   G
Sbjct: 233 EKQLSITYDTQRLAIE----EKELKAAMVDQQALLKREDQRL----DRLTTSEIKASAKG 284

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +    + ++  +      L  +V   +   + A  + +Q Q+++ G   T+     +  
Sbjct: 285 VVYNVNA-TTGRHVGAGDSLASVVDCERSFVV-AIFSYRQGQNLQVGSAVTI-----SGG 337

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEY 386
                + I+ +I P  S   +      +
Sbjct: 338 SVGPRRGIVTEILPKTSDTVDATYAVPF 365


>gi|78187549|ref|YP_375592.1| secretion protein HlyD [Chlorobium luteolum DSM 273]
 gi|78167451|gb|ABB24549.1| Secretion protein HlyD [Chlorobium luteolum DSM 273]
          Length = 360

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 69/199 (34%), Gaps = 20/199 (10%)

Query: 220 ERIVYKSTLELRENIHEQKNML---RHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           E  V ++   LRE     K+          L+ E  +   ++ +   +   Q +   + +
Sbjct: 97  EFAVKEARAALREQEAAMKDAELDFSRKENLFREGAVSRQDFDR-AEKVRVQARELKSQK 155

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
             +L ++E   ++ T+ +P  G ++  Q   + +Y      +  +V  S    +  ++  
Sbjct: 156 EFRLKMVEDDLKKLTVRAPFRG-VLTLQDVKTGDYVSSGTLVATVVDTSGYAVV-VEIDE 213

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             +  ++ G  A V F  Y + R          +  ++   D   +T + Y V   +   
Sbjct: 214 LDVPRIRPGQKAAVVFDAYPERRFSA------SVSRVVPMTDRVTKTSKIYLV-ADMPKG 266

Query: 397 AFSDNNIELRNGFPAEVLF 415
           A          G  A    
Sbjct: 267 AVQG-------GMTATANI 278



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 46/132 (34%), Gaps = 3/132 (2%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +  +V ++G +  +  V  + + +SG +       G  +  G  +L+FE       +  
Sbjct: 44  ELVQAVYATGYVEADA-VANLSAEYSGTVSFIGAREGEMVEAGQSILSFESPRPEFAVKE 102

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            + +++        + + LDF   +    E A   ++    + +            + + 
Sbjct: 103 ARAALREQEA--AMKDAELDFSRKENLFREGAVSRQDFDRAEKVRVQARELKSQKEFRLK 160

Query: 159 SVYRSLKMKLTR 170
            V   LK    R
Sbjct: 161 MVEDDLKKLTVR 172


>gi|222106971|ref|YP_002547762.1| acriflavin resistance protein A [Agrobacterium vitis S4]
 gi|221738150|gb|ACM39046.1| acriflavin resistance protein A [Agrobacterium vitis S4]
          Length = 411

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 69/201 (34%), Gaps = 12/201 (5%)

Query: 45  SSSGEILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++    +        +S        G+IK+   + GS +  G  L   ++      +D  
Sbjct: 56  TAPLTTILSGRAEAFQSADIRPRVGGVIKEIAFKEGSFVKAGDLLYKIDEDTYRASLDEA 115

Query: 100 KVSIKNLRCHIDTEKSALDFLN--NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           K +++     +   ++ L            +K +E  +  LL        + + +    I
Sbjct: 116 KATLEKSEASVPAAQANLQRYERLANTGASQKEYEDAQTTLLQAKASVSESRASLQTAQI 175

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +    S+K     + S     +     +S   +L++  Q D  +  +L E    S  +L 
Sbjct: 176 NLDLTSVKAPFDGVTSATNYSIGNVVTASQTESLMTLRQID-PIYISLNE----SSVNLL 230

Query: 218 QQERIVYKSTLELRENIHEQK 238
           +    +  S L+   N  + +
Sbjct: 231 RLRAAIAASNLKRNGNKADAE 251



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 81/268 (30%), Gaps = 41/268 (15%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK--NAVSQNDLNQQERIVYKSTLE 229
           R+      D+  +   +   ++  +       +L  K      +  L++ +  + KS   
Sbjct: 66  RAEAFQSADIRPRVGGVIKEIAFKEGSFVKAGDLLYKIDEDTYRASLDEAKATLEKSEAS 125

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +       +   R  N    +   E      +    L Q + + ++  + L   +   + 
Sbjct: 126 VPAAQANLQRYERLANTGASQKEYE------DAQTTLLQAKASVSESRASLQTAQINLDL 179

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQP--LM---KIVP--------HSKLTYIRAKVTP 336
            ++ +P  G +    ++S  N    SQ   LM   +I P           L  +RA +  
Sbjct: 180 TSVKAPFDG-VTSATNYSIGNVVTASQTESLMTLRQIDPIYISLNESSVNLLRLRAAIAA 238

Query: 337 KQIQHVKKGYTA-----TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             ++  + G  A      +R               + KID        +  T     V +
Sbjct: 239 SNLK--RNGNKADAETTDIRLTMEDGTEYP----HVGKIDMSEMAVSTSTGT-----VTI 287

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +     F + +  +  G       T   
Sbjct: 288 R---ALFDNPDNLILPGMYVRATITVGE 312


>gi|220904273|ref|YP_002479585.1| Multidrug resistance efflux pump-like protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219868572|gb|ACL48907.1| Multidrug resistance efflux pump-like protein [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 404

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/376 (11%), Positives = 114/376 (30%), Gaps = 52/376 (13%)

Query: 46  SSGEILN-----EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           + G I++     +  +  +   FS  ++ F V  G  + +G PLL            +  
Sbjct: 42  AQGRIVSAHAFLDAMIHVVAPEFSAPVEGFFVREGDSVRRGQPLLRL-------NARVYH 94

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +          +      +    + E A   +  Q  +         ++        +
Sbjct: 95  DRLAEAGREGAALRGMAGQASGPPTMEEAAARLKVAQEAEQDMVRRLALARNEEDARLRL 154

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            +       R+      +LDL +  +      +   +    +K+  E  A  Q +L++ E
Sbjct: 155 QQDSVALHVRL------QLDLRSLDAQGGERTAGKSRYAAAVKS--EAQARRQMELSRVE 206

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                          E   M   + +       E   Y     + +   QR      ++L
Sbjct: 207 YE-------------EASRMRAALEQELGRIRQEMLRY-----KQMASRQRYAPVPSARL 248

Query: 281 TILEKTREQKTI----LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY----IRA 332
               K ++  ++     +P+ G ++     ++   A+  + L+ ++P          + A
Sbjct: 249 EEARKEQDGTSVDASLYAPVDGRVLRITG-AAGQMARSGEALVLLLPEGAAVSENYWLLA 307

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
                +   +  G    +          +  +  ++++           +  +  +V  K
Sbjct: 308 YFAQDRAGAILPGQPCRIELE-----DGQALRGTVQEVLAPQVLPGGKQEKPDGTKVEGK 362

Query: 393 ITDLAFSDNNIELRNG 408
           I+   ++   I +  G
Sbjct: 363 ISAALYTPVRISIEPG 378


>gi|190576104|ref|YP_001973949.1| putative multidrug efflux system HlyD family transmembrane protein
           [Stenotrophomonas maltophilia K279a]
 gi|190014026|emb|CAQ47666.1| putative multidrug efflux system HlyD family transmembrane protein
           [Stenotrophomonas maltophilia K279a]
          Length = 414

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 61/200 (30%), Gaps = 14/200 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +     G +       G ++ +G  L   +        D    + 
Sbjct: 67  ASALGTVTA-MNTVTVSPQVGGQLMSLNFREGQEVKKGDVLAVIDPRTAQASYDQAAAAK 125

Query: 104 KNLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +     + T +S     N       V +   +++  Q+  +     +  + + +  +   
Sbjct: 126 RQNEALLATARSNYQRSNAPEYRQFVAKTDLDTQRNQVAQYESAVAANEASMRSAQVQLQ 185

Query: 161 YRSLKMKLTRMRSIYLNRLD----------LENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           Y  +   +T +  I                   +   +  L +  ++ L  ++      A
Sbjct: 186 YTRVTAPITGIAGIRAVDAGNVVNAGTALVTLTQIHPIHVLFNLPERQLGDVRQAQAAGA 245

Query: 211 VSQNDLNQQERIVYKSTLEL 230
           V    L++ +  V     +L
Sbjct: 246 VPVAALDRADSHVLSGDGKL 265



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 54/169 (31%), Gaps = 11/169 (6%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANL-EFANYLKEI-----SRDLEQNQRTFA 274
           R    S  +      + + +L      Y  +N  E+  ++ +         + Q +   A
Sbjct: 112 RTAQASYDQAAAAKRQNEALLATARSNYQRSNAPEYRQFVAKTDLDTQRNQVAQYESAVA 171

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              + +   +   +   + +PI G I   ++  + N       L+ +       ++   +
Sbjct: 172 ANEASMRSAQVQLQYTRVTAPITG-IAGIRAVDAGNVVNAGTALVTLT-QIHPIHVLFNL 229

Query: 335 TPKQIQHVKKGYTA-TVRFPHYADIREKKF--KAIIEKIDPIISQQDNN 380
             +Q+  V++   A  V                  ++ +D +IS     
Sbjct: 230 PERQLGDVRQAQAAGAVPVAALDRADSHVLSGDGKLDVVDNLISADSGT 278


>gi|148979047|ref|ZP_01815292.1| Membrane-fusion protein [Vibrionales bacterium SWAT-3]
 gi|145962020|gb|EDK27308.1| Membrane-fusion protein [Vibrionales bacterium SWAT-3]
          Length = 374

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 68/210 (32%), Gaps = 18/210 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++ D  +  + + +      E   E+ + L  + +   +A         +        +
Sbjct: 96  VAKGDTVKAGQAIAQIDKGDLEIQLERASALYRLKQKEFKAAQSLKKRGLQGEIAYTTAE 155

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +  +  + +   E   +   I SP +G +         ++     P+  ++       I
Sbjct: 156 ASLTEAKAMMRNAELALKNTVITSPFSGVVQDLMV-ELGDFVGVGDPVASVI-DLAPLVI 213

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A V+ + IQH+     A VR         ++ +  +  +  I S   N           
Sbjct: 214 EADVSERHIQHLLANQDALVRLLG-----REEVEGRLRYVSRISSASTNTF--------- 259

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               ++   +++  L  G  AEV    +  
Sbjct: 260 --PIEIEIDNSDGLLPAGVSAEVKLNLETR 287


>gi|161044|gb|AAA29905.1| myosin heavy chain [Schistosoma mansoni]
          Length = 1940

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 79/223 (35%), Gaps = 6/223 (2%)

Query: 83   PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            P L  E           + +   L+  ++     ++  N     LE+   +    L ++ 
Sbjct: 1384 PALESEAESAKSKCGQLEKTKARLQGELEDLMVDVERANGLASQLERKQNNFNRTLAEWQ 1443

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             KY  + +++ N    +  +S     T +  +     ++  +   LR    +   ++  +
Sbjct: 1444 KKYADSQAELENAQRDARGQS-----TEIFRLKAQLEEVHEQMEGLRRENKNLSDEIHDL 1498

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
                 +   S +++++  R +     EL+  + E ++ L         A LE +   +EI
Sbjct: 1499 TEQLGEGGRSVHEIDKNRRRLEMEKEELQAALEEAESALEQEEAKVQRAQLEMSQIRQEI 1558

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
             R L + +  F +   K        +Q ++ +   G     + 
Sbjct: 1559 DRRLAEKEEEF-EATRKNHQRAMESQQASLEAEGKGKAEAMRV 1600



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 74/219 (33%), Gaps = 22/219 (10%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL---------LDFL 142
                   +   I  L+  ++     ++ L  +   L        EQL         +D  
Sbjct: 1456 AQRDARGQSTEIFRLKAQLEEVHEQMEGLRRENKNLSDEIHDLTEQLGEGGRSVHEIDKN 1515

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +      +     +     +L+ +  +++   L    +  +   +   L+  +++    
Sbjct: 1516 RRRLEMEKEELQAALEEAESALEQEEAKVQRAQLEMSQIRQE---IDRRLAEKEEEFEAT 1572

Query: 203  KNLFEKNAVSQNDLNQQE----RIVYKSTLELRENIHEQKNMLRHINELYDEANL---EF 255
            +   ++   SQ    + E        +   +L ++I+E +  L   N    E      +F
Sbjct: 1573 RKNHQRAMESQQASLEAEGKGKAEAMRVKKKLEQDINELEVSLDGANRARAEQEENVKKF 1632

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               ++E+   LE +QR   D   +    E+   + T+L+
Sbjct: 1633 QQQVRELQSQLEDDQRQRDDLREQFQAAER---RATVLA 1668



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 77/212 (36%), Gaps = 10/212 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ED +       ++      R  +      LD L    D  E++ +  E +  +   + 
Sbjct: 1642 QLEDDQRQRDDLREQFQAAERRATVLA--GELDELRIALDQAERSRKIAEAERAEASDRA 1699

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                ++     +++  R L+  L  M      + DLE  ++  +      +K +     +
Sbjct: 1700 TEMSTQT--ASLAAQKRKLEADLAAM------QADLEEAANEAKQADERAKKAMADSARV 1751

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            FE+    Q      E+   +  ++++E +   ++      +   +A  +    ++E+  +
Sbjct: 1752 FEEIRQEQEHTQHVEKARKQLEIQVKELMARLEDSESGAMKNGRKAMGKLEQRVRELETE 1811

Query: 266  LEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            L   QR   +    L  +++  ++ ++ +   
Sbjct: 1812 LAAEQRRHGETQKNLRKVDRRMKEISLQAEED 1843



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 66/202 (32%), Gaps = 16/202 (7%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            +  + +++     ++ E++ +     +   + +  + R  +  +          +     
Sbjct: 1524 EELQAALEEAESALEQEEAKVQRAQLEMSQIRQEIDRRLAEKEEEFEATRKNHQRAMESQ 1583

Query: 157  ISSVYRSLKMKLTRMR----------SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             +S+    K K   MR           + ++        +     +   Q+ +  +++  
Sbjct: 1584 QASLEAEGKGKAEAMRVKKKLEQDINELEVSLDGANRARAEQEENVKKFQQQVRELQSQL 1643

Query: 207  EKNAVSQNDLNQQ----ERIVYKSTLELRENI--HEQKNMLRHINELYDEANLEFANYLK 260
            E +   ++DL +Q    ER       EL E     +Q    R I E       + A  + 
Sbjct: 1644 EDDQRQRDDLREQFQAAERRATVLAGELDELRIALDQAERSRKIAEAERAEASDRATEMS 1703

Query: 261  EISRDLEQNQRTFADEMSKLTI 282
              +  L   +R    +++ +  
Sbjct: 1704 TQTASLAAQKRKLEADLAAMQA 1725



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 26/219 (11%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             D+      +L K+        +  E++       + D +         +L D L + + 
Sbjct: 1147 SDLTKKREAELMKLKRDLEDTRLQNEQAIATMRKKQSDAI--------NELADQLDQANK 1198

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLF 206
              +K      S     L     ++ SI   +L+ E     L + L      L    +NL 
Sbjct: 1199 AKAKAEKER-SQFKAELDDAHNQVDSIMKAKLNSEKTVKALESQLQEVSVKLDEATRNLN 1257

Query: 207  EK---NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE--------- 254
            E+    A S  ++++ +R + ++  +L +    ++ +   + E       E         
Sbjct: 1258 EQASTKARSSQEVSELQRQLEEAESQLSQLNKIKQQLSAQLEEARHSLEDESRMKAKLNG 1317

Query: 255  ----FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                  + L  +   LE+ Q    D   +L  L+   +Q
Sbjct: 1318 EVRNLTSDLDSLRETLEEEQSAKGDLQRQLQKLQGELQQ 1356



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 70/203 (34%), Gaps = 10/203 (4%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +  I+  K  +++L   +   +      +N+   L+     +     D +    +   K 
Sbjct: 930  SAEIEELKKDVEDLESSLQKAEQEKQTKDNQIRTLQSEMAQQ-----DEMIGKLNKDKKN 984

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM----KNLFEK 208
                      +L+ +  ++  +   +  LE+    +   L+  QK    +    + L   
Sbjct: 985  LEEQNKRTQEALQAEEDKVNHLNKLKAKLESTLDEMEENLAREQKIRGDVEKSKRKLEGD 1044

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
               +Q  ++  ER+      +LR    E   +     E       +    +KE+   +++
Sbjct: 1045 LKATQETVDDLERVKRDLEEQLRRKEAEIGGLSGKF-EDEQGLVAQLQRKIKELQTRIQE 1103

Query: 269  NQRTFADEMSKLTILEKTREQKT 291
             +     E +  +  EK+R+Q  
Sbjct: 1104 LEEDLEAERAARSKAEKSRQQLE 1126



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 64/199 (32%), Gaps = 19/199 (9%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             +   K  +  +  E+  ++ LN     LE   +  EE L                    
Sbjct: 985  LEEQNKRTQEALQAEEDKVNHLNKLKAKLESTLDEMEENLAREQKIR------------G 1032

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE--KNAVSQNDL 216
             V +S +     +++      DLE     L   L   + ++  +   FE  +  V+Q  L
Sbjct: 1033 DVEKSKRKLEGDLKATQETVDDLERVKRDLEEQLRRKEAEIGGLSGKFEDEQGLVAQ--L 1090

Query: 217  NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD--LEQNQRTFA 274
             ++ + +     EL E++  ++       +   +   E    +  +         Q    
Sbjct: 1091 QRKIKELQTRIQELEEDLEAERAARSKAEKSRQQLESELEEVVDRLEEQDGATAAQSDLT 1150

Query: 275  DEMS-KLTILEKTREQKTI 292
             +   +L  L++  E   +
Sbjct: 1151 KKREAELMKLKRDLEDTRL 1169



 Score = 41.2 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 65/193 (33%), Gaps = 18/193 (9%)

Query: 100  KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            + ++K L   +      LD      +          +++ +   +     S++    ++ 
Sbjct: 1232 EKTVKALESQLQEVSVKLDEATRNLNEQASTKARSSQEVSELQRQLEEAESQL--SQLNK 1289

Query: 160  VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            + + L  +L   R    +   ++ K   L   + +   DL  ++   E+   ++ DL   
Sbjct: 1290 IKQQLSAQLEEARHSLEDESRMKAK---LNGEVRNLTSDLDSLRETLEEEQSAKGDL--- 1343

Query: 220  ERIVYKSTLELRENIHEQKN----MLRHINELYDEANLEFANYLKEISR------DLEQN 269
            +R + K   EL++               + EL  + N +      E          LE+ 
Sbjct: 1344 QRQLQKLQGELQQLRSRGGGGGDVRSEEVEELKRKMNAKIPALESEAESAKSKCGQLEKT 1403

Query: 270  QRTFADEMSKLTI 282
            +     E+  L +
Sbjct: 1404 KARLQGELEDLMV 1416


>gi|32034728|ref|ZP_00134859.1| COG0845: Membrane-fusion protein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126207875|ref|YP_001053100.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           L20]
 gi|165975852|ref|YP_001651445.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|303249753|ref|ZP_07335957.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|303252634|ref|ZP_07338797.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247393|ref|ZP_07529440.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307249613|ref|ZP_07531599.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307251941|ref|ZP_07533842.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|126096667|gb|ABN73495.1| probable macrolide-specific efflux protein [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165875953|gb|ABY69001.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|302648602|gb|EFL78795.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302651320|gb|EFL81472.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306856090|gb|EFM88246.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306858311|gb|EFM90381.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306860633|gb|EFM92645.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 393

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 83/230 (36%), Gaps = 25/230 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLR---HINELYDEANLEFANYLKEISRDLEQNQ 270
           N L+  E  +     +L+      +        +N+LY + +   +++ +     L   +
Sbjct: 97  NSLSTAEATLSSYQAQLKSAQVALEVAQSNFNRLNKLYKQQSASQSDF-ETAKNTLASAR 155

Query: 271 RTFADEMSKLTILE-------KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            T  +  +++   +              I+SP+ GTIV     S       +Q    IV 
Sbjct: 156 ATVDNVKAQIKSAQISVNDAKTNLNYTQIVSPMDGTIVSIPV-SVGQTVNANQTSPTIVH 214

Query: 324 HSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
            +      ++ +++   I  VK G    +RF   A+       + I+ +DP ++   ++ 
Sbjct: 215 VADLSKMLVKLEISEGDIAQVKAGQA--IRFTTLAEPNH-THNSKIDSVDPALTTLSDDN 271

Query: 382 QTQEYYEVILKITDLAFSDNNI------ELRNGFPA--EVLFTAKNTTLA 423
            + +Y E       + +  N++       LR G     +V    +   L 
Sbjct: 272 ASNKYAEKSGNTEAIYYYANSLVENSEQRLRIGMTVQGQVDIVKRENVLI 321



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 55/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+  V ++G +       E+ +  SG I    V  G Q+ +G  L   +    ++ +   
Sbjct: 44  IDKHVLATGSVRAS-KRTEVGAQVSGKIINLYVTLGQQVKKGDLLAEIDSSNQSNSLSTA 102

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++ + +  + + + AL+   + ++ L K ++ +     DF    ++  S      + +
Sbjct: 103 EATLSSYQAQLKSAQVALEVAQSNFNRLNKLYKQQSASQSDFETAKNTLASA--RATVDN 160

Query: 160 VYRSLKMKLTRMRSIYLN 177
           V   +K     +     N
Sbjct: 161 VKAQIKSAQISVNDAKTN 178


>gi|260900637|ref|ZP_05909032.1| macrolide-specific efflux protein MacA [Vibrio parahaemolyticus
           AQ4037]
 gi|308107602|gb|EFO45142.1| macrolide-specific efflux protein MacA [Vibrio parahaemolyticus
           AQ4037]
          Length = 375

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 81/293 (27%), Gaps = 54/293 (18%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q+   + +           G          +   ++    +   L  +    +A +   
Sbjct: 47  AQVSGQIQRLAVNLGDEIKQGDLIAQIDSLTQQNSLKEAQASLNSLNAQYQAKQAQIKQA 106

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +    K +    A S+ D    E  +     EL +   E +    +++          
Sbjct: 107 NYEYVRQKGMLAAKASSRADYENAEATLAIYKAELAQLDAEIEKAKINVDN--------- 157

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                       +      TI +P+ GT+VY            +
Sbjct: 158 ---------------------------AQLDLGYTTINAPMDGTVVYTAV-EEGQTVNAN 189

Query: 316 QPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP- 372
           Q    I+  +      ++A+++   +  V  G TA   F       + +FK  +  I+P 
Sbjct: 190 QTTPTIIELAKLDTMTVKAEISEADVIFVHPGQTA--LFTILGKPNQ-QFKGTLRAIEPG 246

Query: 373 ------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   S    +     YY  +  +      +    LR G  A+V    + 
Sbjct: 247 PTIMDGDDSDLSISDSDAIYYNAVFDV-----KNPQGILRIGMTAQVSIVLEQ 294



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 53/130 (40%), Gaps = 3/130 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE +V ++G +     +V + +  SG I++  V  G +I QG  +   + +   + + 
Sbjct: 25  GNIEKAVLANGMLQAS-KLVNVGAQVSGQIQRLAVNLGDEIKQGDLIAQIDSLTQQNSLK 83

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S+ +L      +++ +   N +Y   +    ++     D+     +    ++   +
Sbjct: 84  EAQASLNSLNAQYQAKQAQIKQANYEYVRQKGMLAAKASSRADYENAEATLA--IYKAEL 141

Query: 158 SSVYRSLKMK 167
           + +   ++  
Sbjct: 142 AQLDAEIEKA 151


>gi|126342855|ref|XP_001372150.1| PREDICTED: similar to GRIP1 associated protein 1 [Monodelphis
           domestica]
          Length = 1638

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 69/205 (33%), Gaps = 7/205 (3%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            +++    L +  +   +     +  EK  L         L +  + R  Q  +   +  
Sbjct: 438 LDEVAAEALQEKSRHKEELGSARLQAEKDVLAVRARYERELRQLHDGRRRQEEELRAQIR 497

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              ++     + S+ + ++    +++S+   +   E +       L    +     +NL 
Sbjct: 498 EEKART--RELESLQQMVEELRAQLQSMEGAKGWFERRLKEAEEALEEQHQGHE--ENLR 553

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL---KEIS 263
            +    + +L + E  V     +LRE    +   L  I +L  E            K+ S
Sbjct: 554 AEEERHKAELQRMEEEVQAVEGQLREAEALRAGHLDTIAQLQQEVKDVADGQRILEKKGS 613

Query: 264 RDLEQNQRTFADEMSKLTILEKTRE 288
             L+  +R    E  +   L++  +
Sbjct: 614 ASLKDLKRQLQLERKRADKLQERLQ 638



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 67/212 (31%), Gaps = 10/212 (4%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEK-SALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
               +    +     S+  LR    TE+      L    D         +EQ+   L + 
Sbjct: 281 LRTQKLQQELQAANQSLAELREQCQTERQDHASALRTLQDQAACQSADSQEQVQALLAEN 340

Query: 146 HSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +  + +       ++  + L +   +   +       + +   L          L   +
Sbjct: 341 DALRTNLAALEQIQTAKTQELCVLREQTAGLVTELQQRQAEFEALAGQRDDLSSQLQESQ 400

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
               +  + Q  +  QE+      LE      E++  L  ++E+  EA  E + + +E+ 
Sbjct: 401 R-ANERILEQLQVLGQEKEHTSRELEEARKSAEKRKAL--LDEVAAEALQEKSRHKEELG 457

Query: 264 RDLEQNQRTFADEMSK----LTILEKTREQKT 291
               Q ++      ++    L  L   R ++ 
Sbjct: 458 SARLQAEKDVLAVRARYERELRQLHDGRRRQE 489


>gi|150375899|ref|YP_001312495.1| RND family efflux transporter MFP subunit [Sinorhizobium medicae
           WSM419]
 gi|150030446|gb|ABR62562.1| efflux transporter, RND family, MFP subunit [Sinorhizobium medicae
           WSM419]
          Length = 340

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 65/188 (34%), Gaps = 18/188 (9%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E +  + E +  L    E Y    L  A       + +++ +   A   + +   E    
Sbjct: 94  EAQAILGELQARLSLAQEEYRR-KLALAERNTISEQTVDRARTDVAQLEALIAGQEARLA 152

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              + +P AG ++  Q       A+    ++  V   +   + A+V  + I  V+ G  A
Sbjct: 153 AYVLRAPSAGRVLR-QDGEIGEVAELG-TVLFWVGEPRPLIVEAEVNEEDIPRVEVGQKA 210

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            +R   + +      +A+++ I P              Y V L + +      +  LR G
Sbjct: 211 YLRSDVFPER---ALEAVVDSITPKGDPVTKT------YRVRLGLPE------DTPLRIG 255

Query: 409 FPAEVLFT 416
              +V   
Sbjct: 256 MSTDVNIV 263



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/138 (9%), Positives = 41/138 (29%), Gaps = 9/138 (6%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE----NGSQILQGTPLLTFEDIETTDLI 96
              V +SG +             +  +++  VE     G ++  G  L   +D E   ++
Sbjct: 45  AEIVYASGVVEPRVWAKV-----TSTVRERIVEQCNCEGERVETGDALARLDDTEAQAIL 99

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              +  +   +     + +  +        +++A     +      G+     + V    
Sbjct: 100 GELQARLSLAQEEYRRKLALAERNTISEQTVDRARTDVAQLEALIAGQEARLAAYVLRAP 159

Query: 157 ISSVYRSLKMKLTRMRSI 174
            +        ++  +  +
Sbjct: 160 SAGRVLRQDGEIGEVAEL 177


>gi|317478778|ref|ZP_07937931.1| HlyD family secretion protein [Bacteroides sp. 4_1_36]
 gi|316905113|gb|EFV26914.1| HlyD family secretion protein [Bacteroides sp. 4_1_36]
          Length = 226

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 16/188 (8%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L    +  DE  L  A   ++   + E+ +  +    + L   E+     TI SPI G 
Sbjct: 1   KLLRAQQDADEKQLIAATDYEQSVYNYEKAKSNYESSQASLAKAERNLSYATITSPIDGV 60

Query: 300 IVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           ++  +   +            L  I        + A V    I  V++G  AT     Y 
Sbjct: 61  VIS-RDVEAGQTVASGFETPTLFTIAADLTQMQVVADVDEADIGGVEEGQRATFTVDAYP 119

Query: 357 DIREKKFKAIIEKI----DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           +     F+ ++ +I        S    +  T   YEV++     +  + +++L+    A 
Sbjct: 120 ND---VFEGVVTQIRLGDASSSSTSSTSTSTVVTYEVVI-----SAHNPDLKLKPRLTAN 171

Query: 413 VLFTAKNT 420
           V     + 
Sbjct: 172 VTIFTLDR 179


>gi|270157977|ref|ZP_06186634.1| hypothetical protein LLB_1444 [Legionella longbeachae D-4968]
 gi|269990002|gb|EEZ96256.1| hypothetical protein LLB_1444 [Legionella longbeachae D-4968]
          Length = 320

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 90/236 (38%), Gaps = 22/236 (9%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    +   K   +R  + +    K     S +    ++ +      ++ + R I L   
Sbjct: 45  IRAPENGYIKKLSARTGEKIIANQKLLQFASPLVEEKLAYL------QVEKKRIIELMNS 98

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFE--KNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            +EN S  +   L+  Q+D+   K ++E  KN     DL + +        E R+N    
Sbjct: 99  LVENNSQQISQALNISQQDIETSKLVYERFKNYSKNGDLIELQLE------EARKNYITA 152

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 +++  +E +L+ A  ++         +R   +  +++  ++       + SP  
Sbjct: 153 VRSYVELSQKIEELSLQRATLIE------VNFKRKILEIDNEVEQIKTKMRYFALRSPDN 206

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           GTI+   +     +    Q LM IV   K   I A + PK  + + +G    + FP
Sbjct: 207 GTIMNISTHQD-EFVSAGQNLMSIV-TDKNLRIVAFIEPKYAEDIYQGKKINIIFP 260


>gi|149199741|ref|ZP_01876772.1| probable membrane protein [Lentisphaera araneosa HTCC2155]
 gi|149137146|gb|EDM25568.1| probable membrane protein [Lentisphaera araneosa HTCC2155]
          Length = 445

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/370 (14%), Positives = 113/370 (30%), Gaps = 99/370 (26%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +  SG++++  V+ G ++ +G  L T    +                             
Sbjct: 88  ALVSGVVEEIFVKGGDKVTKGQVLATLNKEDIK--------------------------- 120

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                 LE    + + Q L+     H    +V N  I     SLK   + +     NR  
Sbjct: 121 ------LELMEANNKLQELNLNVAQHFLSIEVLNAKIK-ENESLKKTASAIADTANNRKK 173

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              ++    +  +  Q +L  ++ L +                          + E K  
Sbjct: 174 RLKQAGPGTSKFTQEQAELEHVEKLNK--------------------------VDEYKFK 207

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            + I     +     A         + ++Q    +   ++  +E   ++ TI +P+ G I
Sbjct: 208 NQVIEAQIKQTQQLIA---------IAESQVAIQEV--RIQKIELNLKRCTITAPVNGII 256

Query: 301 VYNQS--------FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
               +         S +     S  + +I        ++  V   ++  V+ G    +  
Sbjct: 257 QTMHARVGRKQMLNSDNAV---STTVAEIF-DPTQILVKVDVPLNELSKVQIGQKTRISL 312

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
               +  ++K    +   +     Q N L      EV + I        ++ LR    A+
Sbjct: 313 ----ESIKEKLSGEVVSFEGEADYQKNTL------EVHVAIP-----KGHLSLRPEMLAQ 357

Query: 413 V-LFTAKNTT 421
           V   ++K +T
Sbjct: 358 VEFISSKQST 367


>gi|27379745|ref|NP_771274.1| hypothetical protein bll4634 [Bradyrhizobium japonicum USDA 110]
 gi|27352898|dbj|BAC49899.1| bll4634 [Bradyrhizobium japonicum USDA 110]
          Length = 434

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 72/222 (32%), Gaps = 12/222 (5%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               +  +V +SG +      VEI S  +G ++   V+ G ++ +G PL+  E  E+   
Sbjct: 72  ARGRLVETVVASGHVETP-YRVEIGSQITGTVEDVLVQEGERVTKGQPLIALEARESKAS 130

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   + ++      I   +  L   + K    +     R  Q                  
Sbjct: 131 VVQAQGAVAQAEARIRQLE-ELTLPSAKEAQTQAEATLRNAQQTYDRTAQLERNGYATRA 189

Query: 156 GISSVYRSLKMKLTRMRSIYLN----------RLDLENKSSLLRALLSSHQKDLTMMKNL 205
            +    ++L +     R+               +  + + +  RA L + +  L     +
Sbjct: 190 ALDDAQKTLDVARAAKRATEFQVYTASPGGSDHVMAQTQLNQARANLDTAESRLGYATIV 249

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             ++ V      ++  +V      L      +  ++  I+E 
Sbjct: 250 APRDGVLITRSVERGTVVQAGKALLVLAPSGELQLVLQIDER 291



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/272 (12%), Positives = 78/272 (28%), Gaps = 36/272 (13%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIY-LNRLDLENKSSLLRALLSSHQKDLTMMK 203
             +  ++     +     ++     R+R +  L     +   +   A L + Q+      
Sbjct: 119 LIALEARESKASVVQAQGAVAQAEARIRQLEELTLPSAKEAQTQAEATLRNAQQTYDRTA 178

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L      ++  L+  ++ +  +    R    +                           
Sbjct: 179 QLERNGYATRAALDDAQKTLDVARAAKRATEFQVYTASPG-------------------G 219

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            D    Q       + L   E      TI++P  G ++  +S       Q  + L+ + P
Sbjct: 220 SDHVMAQTQLNQARANLDTAESRLGYATIVAPRDG-VLITRSVERGTVVQAGKALLVLAP 278

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             +L  +  ++  + +  +  G TA      Y D     F A +  I+P +      ++ 
Sbjct: 279 SGELQLV-LQIDERNLGRLALGQTALASADAYPDRH---FSATVTYINPGVDISRATVEV 334

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               ++ +K        +           V  
Sbjct: 335 ----KLTVKEPPDYLRQD-------MTVSVDI 355


>gi|257464761|ref|ZP_05629132.1| membrane-fusion protein [Actinobacillus minor 202]
 gi|257450421|gb|EEV24464.1| membrane-fusion protein [Actinobacillus minor 202]
          Length = 388

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 105/289 (36%), Gaps = 39/289 (13%)

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRM--RSIYLNRLDLENKSSLLRALLSSHQKDLT 200
           G   ++        +S    SL +KL +   +   +  +D  N+S+ L    +S      
Sbjct: 53  GSVRASQRTEVGAQVSGKIISLNVKLGQAVKKGDLIAEIDASNQSNSLSTAEASLASYQA 112

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            +K+      V+Q++  +  ++    +  L  ++   KN L       D           
Sbjct: 113 KLKSAQVALEVAQSNYARLSKLYKSDSASL-SDLETAKNTLASAKATVD----------- 160

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E+   ++  Q +  D        +       I+SP+ G IV     S       +Q    
Sbjct: 161 EVKSQIQTAQISVND-------AKTNLNYTQIISPMDGIIVSVPV-SVGQTVNSNQTSPT 212

Query: 321 IVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           IV  +      I+ +++   I  V++G    +RF   A+   + +++ I+ +DP ++   
Sbjct: 213 IVQVADLSKMLIKLEISEGDIAQVQEGQ--EIRFTTLAEPN-RAYQSKIDTVDPALTTLT 269

Query: 379 NNLQTQE-------YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +N  T+E       YY     + +   +DN + +  G   +        
Sbjct: 270 DNNYTEESGNTEAIYYYANALVDN---ADNRLRI--GMTVQGQVNIAKR 313



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 55/142 (38%), Gaps = 6/142 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+ +V ++G +       E+ +  SG I    V+ G  + +G  +   +    ++ +   
Sbjct: 45  IDKNVLATGSVRAS-QRTEVGAQVSGKIISLNVKLGQAVKKGDLIAEIDASNQSNSLSTA 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S+ + +  + + + AL+   + Y  L K ++S    L D       T         ++
Sbjct: 104 EASLASYQAKLKSAQVALEVAQSNYARLSKLYKSDSASLSDL-----ETAKNTLASAKAT 158

Query: 160 VYRSLKMKLTRMRSIYLNRLDL 181
           V        T   S+   + +L
Sbjct: 159 VDEVKSQIQTAQISVNDAKTNL 180


>gi|254563460|ref|YP_003070555.1| OMA family outer membrane saccharide export protein
           [Methylobacterium extorquens DM4]
 gi|254270738|emb|CAX26743.1| putative OMA family outer membrane saccharide export protein
           [Methylobacterium extorquens DM4]
          Length = 455

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/207 (9%), Positives = 63/207 (30%), Gaps = 12/207 (5%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
               E    ++L +++ +  +  ++ ++       +   +  +A                
Sbjct: 177 LTARERLRSLELARLAQRARQLRLEAQRDGRTSFVSDELIGPEA------------TALM 224

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               ++F+    +    + +   ++  +   R  L  + +L+   +   +  +     L 
Sbjct: 225 RGEQEIFSLQRETERSEVGLLRQQVERLETERTSLTQQRNLIEEQVKLTEAQVRNYARLT 284

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +     Q  +  ++R   +   EL     E         EL          + + +  DL
Sbjct: 285 DNGHGLQTIMVDRQRENARVRAELARIDAELARNGTATGELTLRQRDTENGHRRRVVADL 344

Query: 267 EQNQRTFADEMSKLTILEKTREQKTIL 293
           +  ++   +  + L I     E +   
Sbjct: 345 QATRQQLLETEASLPIARDLLESRARR 371


>gi|226226721|ref|YP_002760827.1| secretion protein HlyD family protein [Gemmatimonas aurantiaca
           T-27]
 gi|226089912|dbj|BAH38357.1| secretion protein HlyD family protein [Gemmatimonas aurantiaca
           T-27]
          Length = 444

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 19/194 (9%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           + +E +   K + R +     +A    A+ L+   R L       A E++ +      R 
Sbjct: 124 QAQEELLLAKRLTRDVAAASTDAQRSAADLLESSRRRLAY-WDIPATEIAAIEETGTVRR 182

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             T+ SP AG ++     +        + L + V   +  ++  +V  + +  V+ G   
Sbjct: 183 TLTLRSPAAGYVLEKNVVA-GQRIMAGEALYQ-VADLRRVWVEGEVFEQDLAQVRIGQMV 240

Query: 349 TVRFPHYA-DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
              F     D R  +   +   I P                V +++     ++ +++L+ 
Sbjct: 241 HADFQALPGDHRMGRIGYVYPTISPETRT------------VRVRV---VLANADLQLKP 285

Query: 408 GFPAEVLFTAKNTT 421
           G  A +       T
Sbjct: 286 GMYATLRIVGGART 299


>gi|254423974|ref|ZP_05037692.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
 gi|196191463|gb|EDX86427.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
          Length = 447

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/261 (11%), Positives = 81/261 (31%), Gaps = 34/261 (13%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +    + R E +    G++      + +          +  L  +     N      +  
Sbjct: 78  VRSEIQGRIETVFVSPGEFVGPGQSIVSLRPDQTAPQYEGDLAGVEVARTNLASARAQLG 137

Query: 187 LLRALLSSHQKDLTM-------MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           + +A  ++   +L +       ++ L+E+ A+++  L++    V  +    + N    + 
Sbjct: 138 IAQAQRTNALSELNVATEYEPRLRTLYEQGAIAELRLDEGLLEVEAA----KNNFAAAEE 193

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            +        +A              L   Q                     ++SPI+G 
Sbjct: 194 KVTAAQSAIIQAESSIRQAQARADASLVSFQSK------------------EVVSPISGV 235

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +          Y      +++I   ++   +  +V   +   +K+G T  +  P   ++ 
Sbjct: 236 VGDLNV-KRGEYIGTGDQIVQIT-QTENLVLNLQVPSTRSSQLKEGLTVQLIDPATDELL 293

Query: 360 EKKFKAIIEKIDPIISQQDNN 380
                  ++ I P ++ +   
Sbjct: 294 T---NGTVDFISPTVNSEGQT 311



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 66/195 (33%), Gaps = 10/195 (5%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           ++S   G I+   V  G  +  G  +++    +T    +     ++  R ++ + ++ L 
Sbjct: 78  VRSEIQGRIETVFVSPGEFVGPGQSIVSLRPDQTAPQYEGDLAGVEVARTNLASARAQLG 137

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   + +A  +     L+   +Y      ++  G  +  R L   L  + +   N 
Sbjct: 138 --------IAQAQRTNALSELNVATEYEPRLRTLYEQGAIAELR-LDEGLLEVEAAKNNF 188

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
              E K +  ++ +   +  +   +   + + VS     +    +     +L     E  
Sbjct: 189 AAAEEKVTAAQSAIIQAESSIRQAQARADASLVSFQS-KEVVSPISGVVGDLNVKRGEYI 247

Query: 239 NMLRHINELYDEANL 253
                I ++    NL
Sbjct: 248 GTGDQIVQITQTENL 262


>gi|167754429|ref|ZP_02426556.1| hypothetical protein ALIPUT_02723 [Alistipes putredinis DSM 17216]
 gi|167659054|gb|EDS03184.1| hypothetical protein ALIPUT_02723 [Alistipes putredinis DSM 17216]
          Length = 368

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 63/212 (29%), Gaps = 19/212 (8%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDLEQNQRTF 273
           LN  E  V  + L L +   E +       +     E   +    L++   + +  +   
Sbjct: 100 LNAAESRVTVARLSLDQTRKEFERTEALYAKGVVSQEEFEKGQTTLRQAEEEFQNAEDNL 159

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-----SQPLMKIVPHSKLT 328
               + +T   K      I S I G I+       ++  Q         +   V      
Sbjct: 160 EIVKTGITNRYKDLSNTQIRSTITGMILDVPIKVGNSVIQANTFNDGTTIAT-VADMGDM 218

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
             R  V    I  +  G    +       ++    +A +E I P  +  +          
Sbjct: 219 LFRGNVDETDIGRLHAGMPVVLTIGA---MQGTVLQATLEYISPKAADVNG--------I 267

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           ++ ++   A    ++ +R G+ A       + 
Sbjct: 268 IMFEVKAAAKIPESVFVRAGYSANASIVTDSR 299



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 69/182 (37%), Gaps = 19/182 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEIS--------------VSSSGEILNED 54
           +K+     L  + L  ++G    + W+   P+++               V +SG++   D
Sbjct: 1   MKKFLKIFLGILFLALLVGTFVFL-WNKTRPVKVVYTLATPVHDTIRQYVIASGKVEPRD 59

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V  IK   SGII +   + G ++ QG  + T + I     ++  +  +   R  +D  +
Sbjct: 60  EV-LIKPQISGIISEVLCKAGDRVKQGDVIATVKVIPEMGTLNAAESRVTVARLSLDQTR 118

Query: 115 SALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              +     Y    V ++ FE  +  L     ++ +    +         R   +  T++
Sbjct: 119 KEFERTEALYAKGVVSQEEFEKGQTTLRQAEEEFQNAEDNLEIVKTGITNRYKDLSNTQI 178

Query: 172 RS 173
           RS
Sbjct: 179 RS 180


>gi|330816905|ref|YP_004360610.1| secretion protein HlyD [Burkholderia gladioli BSR3]
 gi|327369298|gb|AEA60654.1| secretion protein HlyD [Burkholderia gladioli BSR3]
          Length = 362

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/262 (9%), Positives = 73/262 (27%), Gaps = 17/262 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF---EDIETTDLIDLKKVSIKNLRC 108
              N+  I    +G + +  VE+  ++  G PLL     +     D     + +++  R 
Sbjct: 59  VGGNITVISPHVAGYVSELLVEDNQRVRAGQPLLRLQPGDFAAALDAAKANEAAMRASRA 118

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            +   ++    L ++        E  E+       +  +   +      +   +S +   
Sbjct: 119 QLLARRTLQQTLIDQ-----AGAEVAEKSAALSFARTDAARYRNLLSTAAGTRQSEERSS 173

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKST 227
             ++           K    R  +      +      + +  A  +    +      +  
Sbjct: 174 AALKQAQAQLDSASAKLREARQQVGVLDSQIAGADAAILQAGAAQRT--AELNVGYTELR 231

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             +   +  +   +        +     A     +  + +++Q        +  I    +
Sbjct: 232 APIDGYVGNRAIHVGSYVTPGTQLMSVVAAKGLWVDANYKEDQLRHMQAGQRAKICADVQ 291

Query: 288 E------QKTILSPIAGTIVYN 303
                  +  +L+P  G +   
Sbjct: 292 SSRCFEGRVHLLAPATGAVFSV 313



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 84/287 (29%), Gaps = 22/287 (7%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + LL       +          +++  S    L R             + +   A LS  
Sbjct: 89  QPLLRLQPGDFAAALDAAKANEAAMRASRAQLLARRTLQQTLIDQAGAEVAEKSAALSFA 148

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + D    +NL    A ++           +S+  L++   +  +    + E   +  +  
Sbjct: 149 RTDAARYRNLLSTAAGTRQ-------SEERSSAALKQAQAQLDSASAKLREARQQVGV-- 199

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                 +   +           +     E       + +PI G +  N++    +Y    
Sbjct: 200 ------LDSQIAGADAAILQAGAAQRTAELNVGYTELRAPIDGYV-GNRAIHVGSYVTPG 252

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH-----YADIREKKFKAIIEKI 370
             LM +V  +K  ++ A     Q++H++ G  A +         +         A     
Sbjct: 253 TQLMSVV-AAKGLWVDANYKEDQLRHMQAGQRAKICADVQSSRCFEGRVHLLAPATGAVF 311

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
             I  Q      T+    V ++I+  A       LR G    V    
Sbjct: 312 SVIPPQNATGNFTRIVQRVPVRISFEAADGVLGVLRPGLSTTVTVDT 358


>gi|237756393|ref|ZP_04584937.1| acriflavin resistance protein AcrE [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691444|gb|EEP60508.1| acriflavin resistance protein AcrE [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 388

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 50/150 (33%), Gaps = 12/150 (8%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +  ++N          I+K   V+ G  +  G  L   +D E     +     ++ 
Sbjct: 62  ADGMVSADNNAKVATKWMGQILK-IYVKEGDYVKAGQVLAILDDSEIKQQKNEALAGLEE 120

Query: 106 L-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           L +   +   +    L N        F  R  +    L + ++   +     +  +   +
Sbjct: 121 LSKAREEALAARKAALEN------YEFAKRTYERFKNLYQENAISKQ----QLEEIETKM 170

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
               + +  +      L+ K S ++A L+ 
Sbjct: 171 IAAKSMVDQVDAKLGQLKAKESQVKAKLAQ 200



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 78/263 (29%), Gaps = 50/263 (19%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           S + +     L  +  +   R +               ++     KNL+++NA+S+  L 
Sbjct: 105 SEIKQQKNEALAGLEELSKAREEALAARKAALENYEFAKRTYERFKNLYQENAISKQQLE 164

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E  +  +                              + + ++   L Q +   +   
Sbjct: 165 EIETKMIAAK-----------------------------SMVDQVDAKLGQLKAKESQVK 195

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +KL  +   +    I +P  G ++  +     + A    P+  I    K     A +   
Sbjct: 196 AKLAQVNVMQGYTVIKAPFDGYVLK-KMNDEGDMAAPGMPIFII--GEKKLQFLANLDES 252

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  VK G    +      D+  K  K  + + +  I   +        ++V L I    
Sbjct: 253 LLDKVKVGDELDI------DLNGKVVKGKVIEKNSNIDPMNRT------FKVKLNIPFSE 300

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
                  +  G   ++L      
Sbjct: 301 ------NITTGMYGKLLIPTDTK 317


>gi|114798209|ref|YP_760244.1| HlyD family secretion protein [Hyphomonas neptunium ATCC 15444]
 gi|114738383|gb|ABI76508.1| HlyD family secretion protein [Hyphomonas neptunium ATCC 15444]
          Length = 335

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/333 (11%), Positives = 93/333 (27%), Gaps = 36/333 (10%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             +  +++    L      ++R      + +       ++  +         +LD     
Sbjct: 25  RLDPADSSADSALVLYGNVDIRQVELAFRVSGRLETMNFEEGDAVSAGEVIAVLDIAPLR 84

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                      +      L       RS  + R     +   L A +   Q+       L
Sbjct: 85  DGLVQAEAEASVR--RAELARLEAGSRSQEIERA--RARVEELEANVLLAQQTFDRQSKL 140

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +   VSQ   +     +  +   L     +   +                      S +
Sbjct: 141 RDSGYVSQQAYDTALAALDAAQKRLVAGKKDLTLVQLGPR-----------------SEE 183

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           +  +        + +          ++++P  G ++  +     +      P+  +   +
Sbjct: 184 ITGSAAGVEAAEAAVAQARMRLGDASLVAPSDG-VLLARVREPGSIVAAGVPVATLA-LT 241

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNN 380
              ++RA V    +  V  G  A V F        + ++  +  + P+      + Q  +
Sbjct: 242 SPVWVRAYVDESDLGFVVPGKAAEV-FT--DSAPGRPYEGQVGFVSPVAEFTPRTVQTPD 298

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           L+T   Y+V + +           LR G P  V
Sbjct: 299 LRTDLVYQVRIIVDAPDSG-----LRQGMPVTV 326



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 41/138 (29%), Gaps = 6/138 (4%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG ++    E G  +  G  +   +     D +   +      R  +   ++      ++
Sbjct: 55  SGRLETMNFEEGDAVSAGEVIAVLDIAPLRDGLVQAEAEASVRRAELARLEAG-----SR 109

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              +E+A  +R E+L   +     T  +      S                   +  +  
Sbjct: 110 SQEIERA-RARVEELEANVLLAQQTFDRQSKLRDSGYVSQQAYDTALAALDAAQKRLVAG 168

Query: 184 KSSLLRALLSSHQKDLTM 201
           K  L    L    +++T 
Sbjct: 169 KKDLTLVQLGPRSEEITG 186


>gi|52425183|ref|YP_088320.1| AcrA protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307235|gb|AAU37735.1| AcrA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 394

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 59/140 (42%), Gaps = 3/140 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +E +V +SG I    N V++ +  SG + K  V  G ++ +G  +   +     + ++
Sbjct: 40  SNVEKTVVASGSIE-SSNEVDVGAQVSGKVVKLYVTLGQEVKKGDKIADIDSTTQINSLN 98

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K ++ + +  +  +++  +   + Y+ L K +  +   L +     ++         +
Sbjct: 99  TAKAALASYQAQLKAKQTGYNVALSSYNRLSKLYTQQSTSLDNLNSAKNTL--DAAKAEV 156

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
            ++  S+K    ++ +   N
Sbjct: 157 DALKESIKQAEIQVNTAETN 176



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 76/250 (30%), Gaps = 47/250 (18%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           N  +  +A L+S+Q  L   +  +     S N L++       S   L    +       
Sbjct: 95  NSLNTAKAALASYQAQLKAKQTGYNVALSSYNRLSKLYTQQSTSLDNLNSAKNTLDAAKA 154

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ L +                             ++   E   +   I SPI GT++ 
Sbjct: 155 EVDALKESIKQAEI----------------------QVNTAETNVDYTKITSPIDGTVIS 192

Query: 303 NQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
               S       +Q    IV  +      I+ +++   I  VK G   T  F   +D   
Sbjct: 193 TPV-SEGQTVNANQTTPTIVTVANLDKMLIKPEISEGDITKVKAGQQVT--FTILSDSTT 249

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQE--------------YYEVILKITDLAFSDNNIELR 406
             + A+I+ +DP  +   +   T                YY   + +      + N  LR
Sbjct: 250 -TYDAVIDSVDPATTTTTDASATSSASSSSSSSSSTSAVYYYANMAVD-----NPNRVLR 303

Query: 407 NGFPAEVLFT 416
            G   E    
Sbjct: 304 IGMTTENTIK 313


>gi|293417586|ref|ZP_06660208.1| multidrug resistance protein mdtN [Escherichia coli B185]
 gi|291430304|gb|EFF03302.1| multidrug resistance protein mdtN [Escherichia coli B185]
          Length = 343

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 87/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQASDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      ++++  G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIHAGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQASDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|289627910|ref|ZP_06460864.1| HlyD family secretion protein [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289647320|ref|ZP_06478663.1| HlyD family secretion protein [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330867885|gb|EGH02594.1| HlyD family secretion protein [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 388

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 4/184 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V+ G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVKEGQQVKAGELLATLDDRSIRASLEQARAQL 113

Query: 104 KNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +  +D  +  L     L     +  + F+ ++  +           + +    +   
Sbjct: 114 AQSKAQLDVAQLDLKRYRQLTQDNGISRQTFDQQQALVRQLEATARGNEASINASQVQLS 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y  ++  +T    I         + S    L S  Q D   ++    +  +        E
Sbjct: 174 YTQIRSPVTGRVGIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAE 233

Query: 221 RIVY 224
           R   
Sbjct: 234 RTSA 237



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 77/252 (30%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L ++       +   E +       +R ++ + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVKEG----QQVKAGELLATLDDRSIRASLEQARAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTQDNGISRQTFDQQQALVRQLEATARGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P     + +  +A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAERTSA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            V+              +  +  ID  +S     ++               F +   +L 
Sbjct: 238 VVKAYQGDGAANGLLLGEGTLSLIDNQVSATTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|332162839|ref|YP_004299416.1| multidrug resistance protein MdtN [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604319|emb|CBY25817.1| membrane fusion component of tripartite multidrug resistance system
           [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325667069|gb|ADZ43713.1| multidrug resistance protein MdtN [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 349

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 93/288 (32%), Gaps = 26/288 (9%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                L   +    S++       +V E +   R + L       +    +     +   
Sbjct: 42  SEDAELGASVVHIASSVPGRIISINVEENSKVRRGDLLFSIEPDLYRLQVEQAQAELKMA 101

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +   +   + +   N      +    +A L    + L  ++ L  K  V+   ++   
Sbjct: 102 EAARDTQQRTVVAEQSNAAITNEQIVRAQANLKLATQTLARLQPLLPKGYVTAQQVDDAA 161

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
              + + + L++ + +       ++                       ++       + L
Sbjct: 162 TAKHDAEVSLKQALKQSFAAEALVSST-------------------AASEALVVARRAAL 202

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            I E+      I +P  G +V     S+  +    Q +  ++ +++  +  A     +++
Sbjct: 203 AIAERELANTQIRAPHDGRVVGLTV-SAGEFVVPDQAIFTLI-NTEHWHASAFFRETELK 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD--NNLQTQEY 386
           H+K G  ATV        R++  +  +E I   +S +D  N  +   Y
Sbjct: 261 HIKVGDCATVYVMA---DRQRAIQGRVEGIGWGVSSEDMLNIPRGLPY 305


>gi|320107112|ref|YP_004182702.1| secretion protein HlyD family protein [Terriglobus saanensis
           SP1PR4]
 gi|319925633|gb|ADV82708.1| secretion protein HlyD family protein [Terriglobus saanensis
           SP1PR4]
          Length = 404

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/321 (11%), Positives = 94/321 (29%), Gaps = 28/321 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V++   +  G  L   +       +       + L   I  E   +       
Sbjct: 59  GPITELHVKDNQLVHTGDLLFKIDQDPYLYALQNALSQQEALGGQIANESRHITS----- 113

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                     +E          +T        ++ V ++    L     I  ++ + E  
Sbjct: 114 ----------QESAARAAQANIATSEAASQRSVADVQQAEAQVLQAQAEIERSKQEAEYA 163

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNML 241
            S L  L     K       + +   +S      +   +  +  +   L     +Q+  +
Sbjct: 164 KSNLARLEPLLAKRYITPDQVDQARTISSARAQSVLLAQAQLASARARLDAARAQQRGAV 223

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             + +   + N   A         L           S +   +   +   + +P    + 
Sbjct: 224 AGVTQSGAQYNQSQA-----AVDILAPLTSQRESRASAVRKAQYDLDHTRVYAPFKARVT 278

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +  S   +A   Q +  ++  +++ ++ A     Q+Q ++ G +  V    +   R  
Sbjct: 279 NLRI-SEGAFAHIGQQVFTLI-DTRVWWVVANFRETQLQQIQPGMSVEVYTMSHPSER-- 334

Query: 362 KFKAIIEKIDPIISQQDNNLQ 382
             + ++E I   +    + + 
Sbjct: 335 -LRGVVESIGYGVVPDSDTVG 354


>gi|297518507|ref|ZP_06936893.1| hypothetical protein EcolOP_12773 [Escherichia coli OP50]
          Length = 261

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 56  AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 114

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 115 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 172

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 173 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 229

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 230 VYRLRIVVTDADDA-----LRQGMPVTV 252


>gi|149369945|ref|ZP_01889796.1| acriflavin resistance protein AcrE, putative [unidentified
           eubacterium SCB49]
 gi|149356436|gb|EDM44992.1| acriflavin resistance protein AcrE, putative [unidentified
           eubacterium SCB49]
          Length = 343

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 69/221 (31%), Gaps = 32/221 (14%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL------KEISRDLEQ 268
            + + + +V  +  +L+    +    +         A  ++  +           ++++ 
Sbjct: 67  KVRKGQLLVSINNSDLQAKRAQVNASITEATAAVTNAEKDYTRFKNLFAANSASQKEVDD 126

Query: 269 NQRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               F    ++L   ++             I +P +GT+      +  + A   QPL+ I
Sbjct: 127 MTANFNMAKARLEGAKQMKNEINAQFAYSNITAPFSGTVTSKNVET-GDMANPGQPLISI 185

Query: 322 -VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             P +    +RA V   +I  +KK     V          K  K  + ++         N
Sbjct: 186 ETPGN--FEVRAMVPESEISQIKKDTEVDVVVKSLN----KTLKGKVTEVSTSA----KN 235

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
              Q  Y V + +           + +G    V F     +
Sbjct: 236 TGGQ--YLVKIALDKTEAG-----ILSGMFTTVQFPVAKKS 269



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/105 (10%), Positives = 38/105 (36%), Gaps = 6/105 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K  V  G ++ +G  L++  +      +  K+  +           +  +    ++
Sbjct: 55  GFVNKVHVSVGDKVRKGQLLVSINN----SDLQAKRAQVNASITEATAAVTNAEKDYTRF 110

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             L  A  + ++++ D    ++   +++   G   +   +  +  
Sbjct: 111 KNLFAANSASQKEVDDMTANFNMAKARL--EGAKQMKNEINAQFA 153


>gi|161520523|ref|YP_001583950.1| multidrug resistance protein MdtN [Burkholderia multivorans ATCC
           17616]
 gi|189353287|ref|YP_001948914.1| multidrug resistance protein MdtN [Burkholderia multivorans ATCC
           17616]
 gi|160344573|gb|ABX17658.1| secretion protein HlyD family protein [Burkholderia multivorans
           ATCC 17616]
 gi|189337309|dbj|BAG46378.1| putative multidrug resistance efflux pump [Burkholderia multivorans
           ATCC 17616]
          Length = 349

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/369 (12%), Positives = 103/369 (27%), Gaps = 81/369 (21%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P++  R   ++I+ + G+   +       +  S+ +   + +VV + SP  G I +  
Sbjct: 7   SRPSAKGRAIAITIVAL-GIAALAYAYHRTTAYPSTDDASIDADVVHVASPVGGRIVRLA 65

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V    ++ +G  L   + +            +   +   D E +                
Sbjct: 66  VHENQRVAKGDLLYEIDPVPYR---------LAVAQAQADVELARA-------------- 102

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                                          SL  +   +     N      +    +  
Sbjct: 103 -------------------------------SLDTRRRSLIGERSNAAVAAEQVKRAKQN 131

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                +D+  +  L  +  VS    +Q +     + + L +   +Q+   + I       
Sbjct: 132 HDLATRDVERLAPLAAQGYVSAQQFDQAKVRQRDAAVSLAQAQEQQRASAQTIG------ 185

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                        D      T     + L   +   E   + +P  G +      +    
Sbjct: 186 -------------DEADAIATLHAREAALARAQHALEDTVVRAPHDGLVTGLTVLA-GET 231

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKI 370
              +Q +  ++  S+   +        +  +  G  ATV    Y+ I R +     +  I
Sbjct: 232 LAPNQSIFTLIDASEWFAV-GNFRETSLNRIAVGDCATV----YSMIDRGRPMTGKVVGI 286

Query: 371 DPIISQQDN 379
              I+  D 
Sbjct: 287 GAGIADSDR 295


>gi|306840772|ref|ZP_07473519.1| exopolysaccharide biosynthesis protein Bme11 [Brucella sp. BO2]
 gi|306289167|gb|EFM60416.1| exopolysaccharide biosynthesis protein Bme11 [Brucella sp. BO2]
          Length = 415

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 77/221 (34%), Gaps = 14/221 (6%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+     +    + ++  +    R   + E    DF     +       +  + 
Sbjct: 151 VTAGMQLI--SAQQEYADLQMQITAQTIRRARFEAELKGTDFTYAVPEQ-----TAANKD 203

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++            +F+   +++    +    +  S       L+    L    +   Q+
Sbjct: 204 MVALTRHMVEGERILFDVRRNNLAAERRALEAQAASYGDEITTLQQSIKLHDTEIQLLQE 263

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDE 250
           ++   K+L ++   +++ L   ER +  +  +       L      Q  + + I  L + 
Sbjct: 264 NVNSSKSLVDRGLAAKSSLRDMERDLSSTRRDALELASFLARARQNQLAVEQRIANLDET 323

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              E A+ L+EI  ++ + QR    ++  +  + K+  Q +
Sbjct: 324 RRSEAASSLQEIDLNMARMQRRSNSQLEAMAEIAKSSGQIS 364


>gi|256059370|ref|ZP_05449572.1| Polysaccharide export protein [Brucella neotomae 5K33]
 gi|261323330|ref|ZP_05962527.1| Bme11 [Brucella neotomae 5K33]
 gi|261299310|gb|EEY02807.1| Bme11 [Brucella neotomae 5K33]
          Length = 415

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 77/221 (34%), Gaps = 14/221 (6%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+     +    + ++  +    R   + E    DF     +       +  + 
Sbjct: 151 VTAGMQLI--SAQQEYADLQMQITAQTIRRARFEAELKGTDFTYAVPEQ-----TAANKD 203

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++            +F+   +++    +    +  S       L+    L    +   Q+
Sbjct: 204 MVALTRHMVEGERTLFDVRRNNLAAERRALEAQAASYGDEITTLQQSIKLHDTEIQLLQE 263

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDE 250
           ++   K+L ++   +++ L   ER +  +  +       L      Q  + + I  L + 
Sbjct: 264 NVNSSKSLVDRGLAAKSSLRDMERDLSSTRRDALELASFLARARQNQLAVEQRIANLDET 323

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              E A+ L+EI  ++ + QR    ++  +  + K+  Q +
Sbjct: 324 RRSEAASSLQEIDLNMARMQRRSNSQLEAMAEIAKSSGQIS 364


>gi|226312799|ref|YP_002772693.1| efflux system [Brevibacillus brevis NBRC 100599]
 gi|226095747|dbj|BAH44189.1| putative efflux system [Brevibacillus brevis NBRC 100599]
          Length = 409

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 89/277 (32%), Gaps = 29/277 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L   LG+Y +    +F      +   +K       +  +++  L    S     L   + 
Sbjct: 80  LPVKLGQYVTKGQVLFKLDEKDLVNGVKQAEA---AYNVSKASLNQAGSSSDQGLVQAKN 136

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   +   +   V+Q  + Q       S     + + +  + L      YD A     +
Sbjct: 137 SLKQAETALQDAKVNQQRMQQLFSQGAIS----AQQMEQANSQLTTAQTSYDNAQQTLQS 192

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ-QSQ 316
             ++ S  + +     A     L    +     T+ SPI G I            Q   Q
Sbjct: 193 AGQKTSVQVSEASVQQAQV--SLQNAREQLANATVTSPINGYISSVS----GAVGQMAGQ 246

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
             + +V ++    ++A ++   I  VK G T  V          K   A +  + PI+  
Sbjct: 247 QPVVVVVNTNPLLVKANLSEADITKVKVGTTVKVNV----QSTGKTIDAKVTAMSPIMDS 302

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           Q         Y V + I + +      EL++     V
Sbjct: 303 QLKA------YPVEITIPNPS-----NELKSDMVVNV 328



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/179 (10%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 35  SILLPIEISVSSSGEILNEDNV---------VEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           +   P+++   ++G ++++  +         V++     G I    V+ G  + +G  L 
Sbjct: 36  AAATPVQVETVATGSVVSDSGLTAKLAPSEEVQVSPKMGGKISSLPVKLGQYVTKGQVLF 95

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLG 143
             ++ +  + +   + +    +  ++   S+ D   +  K  + +     ++ ++     
Sbjct: 96  KLDEKDLVNGVKQAEAAYNVSKASLNQAGSSSDQGLVQAKNSLKQAETALQDAKVNQQRM 155

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           +   +   +    +      L    T   +          K+S+  +  S  Q  +++ 
Sbjct: 156 QQLFSQGAISAQQMEQANSQLTTAQTSYDNAQQTLQSAGQKTSVQVSEASVQQAQVSLQ 214


>gi|218529322|ref|YP_002420138.1| hypothetical protein Mchl_1326 [Methylobacterium chloromethanicum
           CM4]
 gi|218521625|gb|ACK82210.1| conserved hypothetical protein [Methylobacterium chloromethanicum
           CM4]
          Length = 584

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/388 (12%), Positives = 123/388 (31%), Gaps = 25/388 (6%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEI 59
           M      +   +    L R++ + +  ++  LI  S+L P+      S   +    V  +
Sbjct: 1   MSQPTLTSAPEHRHGRLVRVSSVGLASVLAILIGTSVLPPL--VADQSDRAVVNAPVTLL 58

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-SIKNLRCHIDTEKSALD 118
            +P +G I    V  G ++ +G+ +    +        ++    +  LR      ++   
Sbjct: 59  TAPIAGDIGAIPVTAGDKVERGSLVAQITNDRLDRATAIQLAGRVSELRERALAAENKRT 118

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +++A   +  Q++  L               +S      +   ++  +  + 
Sbjct: 119 SNEAYLAAIDRAIRDQSAQMMQVLRSQVEELKAKIASANASGEEKRVLMERQVGMVARDV 178

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
              +   S  +A  ++ Q+       L +K       L    R ++    +   ++ +  
Sbjct: 179 ASPDMVKSTTQAFNAAIQEKKAAEAKLNQK----TVQLEGLARGLF--LGDELRSLADLS 232

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                I        +E     KE+   +   Q     E  +L           I +   G
Sbjct: 233 EKQLSITYDTQRLAIE----EKELKAAMVDQQALLKREDQRL----DRLTTSEIKASAKG 284

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +    + ++  +      L  +V   +   + A  + +Q Q+++ G   T+     +  
Sbjct: 285 VVYNVNA-TTGRHVGAGDSLASVVDCERSFVV-AIFSYRQGQNLQVGSAVTI-----SGG 337

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEY 386
                + I+ +I P  S   +      +
Sbjct: 338 SVGPRRGIVTEILPKTSDTVDATYAVPF 365


>gi|167629624|ref|YP_001680123.1| secretion protein hlyd, putative [Heliobacterium modesticaldum
           Ice1]
 gi|167592364|gb|ABZ84112.1| secretion protein hlyd, putative [Heliobacterium modesticaldum
           Ice1]
          Length = 402

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 87/278 (31%), Gaps = 45/278 (16%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           +G+  S  +++     + +   L      + +   N    + +    +  L   +++L  
Sbjct: 67  VGQRVSAGTRLIQLENNDILAKLDAAKAALAASEANLERAKAQLEKTQIQLDEAKRNLER 126

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            K LFE  A+SQ   +  +        +   N     +    + +               
Sbjct: 127 QKMLFEAGALSQALYDAAQTNYDSIKKDYDMNAASVASAQASVEQNKAAIRQN------- 179

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
                                 E   E   ++SPI+G I         + +  + P + I
Sbjct: 180 ----------------------EVELENSCVVSPISGIIASKNVNVGESLSASTAPFVVI 217

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
             + +   I A V+   I   K G    VR P       K FK  + KI P    +    
Sbjct: 218 --NMQTVQINAGVSEGDINQFKPGLDVDVRVPA---ASPKPFKGKVTKISPSADAKTKT- 271

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                Y V + +      + +  L+ G  AE+L T + 
Sbjct: 272 -----YPVWVSVD-----NTDDLLKAGMYAEILVTTQR 299



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 64/156 (41%), Gaps = 10/156 (6%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  +V+ SG+I   ++V  +    SG       + G ++  GT L+  E+ +    +D
Sbjct: 32  ATLTSTVTLSGKIEPIESVNVV-PKSSGKAAGVYGDVGQRVSAGTRLIQLENNDILAKLD 90

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE---------EQLLDFLGKYHST 148
             K ++     +++  K+ L+    + D  ++  E ++         + L D     + +
Sbjct: 91  AAKAALAASEANLERAKAQLEKTQIQLDEAKRNLERQKMLFEAGALSQALYDAAQTNYDS 150

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             K ++   +SV  +         +I  N ++LEN 
Sbjct: 151 IKKDYDMNAASVASAQASVEQNKAAIRQNEVELENS 186


>gi|320354355|ref|YP_004195694.1| secretion protein HlyD family protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122857|gb|ADW18403.1| secretion protein HlyD family protein [Desulfobulbus propionicus
           DSM 2032]
          Length = 362

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 95/278 (34%), Gaps = 24/278 (8%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             + +      ++    +     +   +L R+R+    +   + ++++  A  +  + +L
Sbjct: 91  QVVAELDPARFRMEVDRLKGEVEAQTRQLERLRTGSRPQEIGKARAAVESARATLREAEL 150

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            + +         +  L    RI   S  E+       + +   +     E +L      
Sbjct: 151 ILAR---------KQSLLVTNRI---SQQEIDSAKARVQTLQAGLKTAEQELSLTIEGPR 198

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +E   D+   + T     S   + ++      +L+   G I  N+       A    P++
Sbjct: 199 RE---DIAAAEATLTALQSARELAQQRLVDSRLLASADGVI-RNRILEPGAMAAAGAPVL 254

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--Q 377
            +   +   +IRA ++   +  +++G  A V+         K +   I        +  +
Sbjct: 255 TLA-LNDPLWIRAYISEPDLGKIREGMPAQVQTDSQPKKIYKGWVGFISSTAEFTPKTVE 313

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              L+T+  Y   +   D      + ELR G P  V+ 
Sbjct: 314 TTELRTKLVYRARIFACDP-----DQELRLGMPVTVII 346



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 57/171 (33%), Gaps = 4/171 (2%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL---DF 119
            +G I    V+ G+ + +G  +   +       +D  K  ++     ++  ++     + 
Sbjct: 72  DAGRILHLHVDEGALVKKGQVVAELDPARFRMEVDRLKGEVEAQTRQLERLRTGSRPQEI 131

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR- 178
              +  V       RE +L+    +     +++    I S    ++     +++      
Sbjct: 132 GKARAAVESARATLREAELILARKQSLLVTNRISQQEIDSAKARVQTLQAGLKTAEQELS 191

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           L +E       A   +    L   + L ++  V    L   + ++    LE
Sbjct: 192 LTIEGPRREDIAAAEATLTALQSARELAQQRLVDSRLLASADGVIRNRILE 242


>gi|255066025|ref|ZP_05317880.1| multidrug resistance protein A [Neisseria sicca ATCC 29256]
 gi|255049570|gb|EET45034.1| multidrug resistance protein A [Neisseria sicca ATCC 29256]
          Length = 396

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 80/273 (29%), Gaps = 27/273 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F          L   + + +         + +  L +A L+  Q DL   + L   +A+S
Sbjct: 102 FQLAYERAQNELIQAIRQNKQQTAVNSKAKAQVLLRKAELAKAQADLRRREALSGTDAIS 161

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +L+     V ++   L+    E+ +    +                         Q  
Sbjct: 162 GEELSHARAAVVQAQAALKAVEAEETSAQAVLGNNIPLRQ-----------------QPA 204

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +S +       ++  I +P+ G I             Q  P+M +VP S   ++ A
Sbjct: 205 VQTAISHIKDAWLNLQRTQIRAPMNGQIAKRNV-QVGQRIAQGSPMMAVVPLSN-LWVDA 262

Query: 333 KVTPKQIQHVKKGYTATVRFPHYAD------IREKKFKAIIEKIDPIISQQDNNLQTQEY 386
                Q++ +K G    +    Y +                     +  Q       +  
Sbjct: 263 NFKESQLRQMKIGQPVEMTADLYGNKVVYHGRVMGLSAGTGSAFSLLPPQNATGNWIKVV 322

Query: 387 YEVILKITDLAFSDNNIELRNG--FPAEVLFTA 417
             V ++I+  A       LR G     +V  + 
Sbjct: 323 QRVPVRISLDAKELQANPLRVGLSMKVKVDISG 355



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 89/236 (37%), Gaps = 23/236 (9%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIG-----LITWSILLPIEISVSSSGEILNEDNVVEIKS 61
             + R    +L  +TLL I+  +G      + W      E +  +        ++V+I  
Sbjct: 19  SRVGRKRGRNLAVITLLFILIAVGVALAYFLFWQYEEETEDAYVA-------GHLVQITP 71

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIET-----TDLIDLKKVSIKNLRCHIDTEKSA 116
             +G ++K   ++   + +G  L+  +D +          +L +   +N +      K+ 
Sbjct: 72  QVTGTVRKVMYDDTDVVKKGDVLVALDDSDFQLAYERAQNELIQAIRQNKQQTAVNSKAK 131

Query: 117 LDFLNNKYDVLEKAFESREEQLL---DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              L  K ++ +   + R  + L   D +     + ++       +  ++++ + T  ++
Sbjct: 132 AQVLLRKAELAKAQADLRRREALSGTDAISGEELSHARAAVVQAQAALKAVEAEETSAQA 191

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQERIVYKS 226
           +  N + L  + ++  A+       L + +          +++ ++   +RI   S
Sbjct: 192 VLGNNIPLRQQPAVQTAISHIKDAWLNLQRTQIRAPMNGQIAKRNVQVGQRIAQGS 247


>gi|237728891|ref|ZP_04559372.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Citrobacter sp. 30_2]
 gi|226909513|gb|EEH95431.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Citrobacter sp. 30_2]
          Length = 378

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 76/226 (33%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT--MMKNLFEKNA 210
           +   +  +   +     + +++     +++  +   +A      KD       +  + N 
Sbjct: 99  YQARVDRLKADIVTAQHKEQALVAQLDEMKANTQRAKATRDKLAKDYQRYAQGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ ++ EQ+ +   ++ L                  L +N 
Sbjct: 159 FSERDIDAARQNYLAQEASVKSSVAEQQQIQSQLDSLV-----------------LGEN- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   E   +Q  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAEFNLDQTVVRAPSDGYVTQVLMR-PGTYAAALPMRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            I A+     +  ++ G  A V F        K F   +  I P +
Sbjct: 260 II-AQFRQNSLLRLEPGDEAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 54/150 (36%), Gaps = 3/150 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L           +D  K  I   +       + LD
Sbjct: 66  VVPQVTGVVTEVTDKKNTLIKKGEVLFKLNPGRYQARVDRLKADIVTAQHKEQALVAQLD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       ++A  +R++   D+      + +KV  +    +  + +  L +  S+  + 
Sbjct: 126 EMKANT---QRAKATRDKLAKDYQRYAQGSQAKVNPFSERDIDAARQNYLAQEASVKSSV 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            + +   S L +L+      +  +K    +
Sbjct: 183 AEQQQIQSQLDSLVLGENSQIASLKAQLAE 212


>gi|254226737|ref|ZP_04920313.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125620754|gb|EAZ49112.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 347

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 63/183 (34%), Gaps = 20/183 (10%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLE--QNQRTFADEMSKLTILEKTREQKTI 292
            + +     +     E N   A   K +  ++          D  S L+ +++  +   +
Sbjct: 101 AQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQV 160

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +         ++     P+  I+       I A V+ + IQHV+    A +RF
Sbjct: 161 RAPFDGVVETLPI-EKGDFVGIGDPVASII-DLHKLVIEADVSERHIQHVQLEQAARIRF 218

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                I   + +  +  I  + S   N       + + +++ +   +     +  G  AE
Sbjct: 219 -----IDGTQTQGKVRYISRLSSLATNT------FAIEVEVDNPQQA-----IPAGVSAE 262

Query: 413 VLF 415
           V  
Sbjct: 263 VEL 265



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 62/200 (31%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I + ++  G  + +   +   +  +    ++  K
Sbjct: 49  DKVIELYGRTAPDRQAK-IGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAK 107

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  + + 
Sbjct: 108 AQLKVRQ----QEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAP 163

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 164 FDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLEQAA 214

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 215 RIRFIDGTQTQGKVRYISRL 234


>gi|226942046|ref|YP_002797120.1| Efflux pump membrane protein [Laribacter hongkongensis HLHK9]
 gi|226716973|gb|ACO76111.1| Efflux pump membrane protein [Laribacter hongkongensis HLHK9]
          Length = 388

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 52/156 (33%), Gaps = 4/156 (2%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             + + +  +     E +   ++ +       + A  + A    ++       Q   A  
Sbjct: 138 LARRQKLAGTEAVTAEELANTRDAVASAEAALNAARQQQAAARAQVLGSPLAEQPAVASA 197

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
           +S          +  I++P+ G +   ++    +  Q   PLM +VP     ++ A    
Sbjct: 198 ISAYKSAWLNWRRTVIVAPVDGYVAR-RTVQVGSQIQPGTPLMAVVPL-SKVWVEANYKE 255

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            Q+  ++ G   T+    Y      ++   +  +  
Sbjct: 256 TQLSQIRIGQPVTLTSDVYGSSV--EYSGRVAGLSA 289



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 11/103 (10%), Positives = 35/103 (33%), Gaps = 11/103 (10%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPI----EISVSSSGEILNEDNVVEIKSP 62
           +  +    A +    ++ + G+  L+ W +        + +           ++V+I   
Sbjct: 10  EPARTRKKALIWLAVVVIVCGVAFLLYWLLYGRTHLSTDDAYVG-------GDLVQITPL 62

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             G +     +N   +  G P++  +  + T  ++     +  
Sbjct: 63  TGGTVVAINADNTDLVRAGQPVVRLDPTDATLALERAATQLAQ 105


>gi|148558311|ref|YP_001257404.1| exopolysaccharide biosynthesis protein Bme11 [Brucella ovis ATCC
           25840]
 gi|148369596|gb|ABQ62468.1| exopolysaccharide biosynthesis protein Bme11 [Brucella ovis ATCC
           25840]
          Length = 415

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 77/221 (34%), Gaps = 14/221 (6%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+     +    + ++  +    R   + E    DF     +       +  + 
Sbjct: 151 VTAGMQLI--SAQQEYADLQMQITAQTIRRARFEAELKGTDFTYAVPEQ-----TAANKD 203

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++            +F+   +++    +    +  S       L+    L    +   Q+
Sbjct: 204 MVALTRHMVEGERTLFDVRRNNLAAERRALEAQAASYGDEITTLQQSIKLHDTEIQLLQE 263

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDE 250
           ++   K+L ++   +++ L   ER +  +  +       L      Q  + + I  L + 
Sbjct: 264 NVNSSKSLVDRGLAAKSSLRDMERDLSSTRRDALELASFLARARQNQLAVEQRIANLDET 323

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              E A+ L+EI  ++ + QR    ++  +  + K+  Q +
Sbjct: 324 RRSEAASSLQEIDLNMARMQRRSNSQLEAMAEIAKSSGQIS 364


>gi|77463103|ref|YP_352607.1| Outer membrane polysaccharide export protein, exoF [Rhodobacter
           sphaeroides 2.4.1]
 gi|126461975|ref|YP_001043089.1| polysaccharide export protein [Rhodobacter sphaeroides ATCC 17029]
 gi|77387521|gb|ABA78706.1| Outer membrane polysaccharide export protein, exoF [Rhodobacter
           sphaeroides 2.4.1]
 gi|126103639|gb|ABN76317.1| polysaccharide export protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 410

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 57/183 (31%), Gaps = 11/183 (6%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +   R  +  E+     L    ++      +   +   F+           +     
Sbjct: 172 REGMMARRARLLAERDNQTELGPVPELDTARGRALLAEEKSFM-----------DLRRDQ 220

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V R+L     +   +      L+ K+  L    +  +K+    KNL E+  V+   L + 
Sbjct: 221 VDRNLAAIDAQSELLKAEIEALQAKTGQLETQRTLAEKETANAKNLSERGLVASGRLFET 280

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +R +     +L +         + I     +          EI+  L++ +    +   K
Sbjct: 281 QRTLSTVESQLLDTSTAILRARQGITTAERDRIALIDGRSSEIAAQLQEVEAQILEMDRK 340

Query: 280 LTI 282
           +  
Sbjct: 341 IDT 343


>gi|332830656|gb|EGK03262.1| hypothetical protein HMPREF9455_00650 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 405

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 35/234 (14%)

Query: 208 KNAVSQNDLN---QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE--- 261
              +S+  ++   + +     + L+ R  + E +N   ++     E  L+  NY ++   
Sbjct: 69  SGVISKIYVDFNSEVKAGQVLAELDKRLLVSELENANANLQTRQVELILQKQNYDRQKGL 128

Query: 262 -------------ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                             +  Q       + +   +      TI S I G ++  ++   
Sbjct: 129 WEKQAISKVDWENAESTYQTAQLAVTSSKAAVLKAQTNLGYATITSTIDGVVIS-RAVEE 187

Query: 309 SNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 S     L  I        + A V    I  VK+G   T     + D    +F+ 
Sbjct: 188 GQTVAASFSTPTLFTIANDLTKMRVIANVDEADIGGVKEGQRVTFTVDAFPDD---EFEG 244

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++    +   N +     YEV++   +       ++L+ G  A V    + 
Sbjct: 245 KVVQVRLEATTTSNVVT----YEVVIDAPNPE-----LKLKPGLTASVNIYTQE 289



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 64/169 (37%), Gaps = 4/169 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I I+V+++G I     +VE+ +  SG+I K  V+  S++  G  L   +       ++
Sbjct: 44  GNISIAVTATGTIEPIT-LVEVGTQVSGVISKIYVDFNSEVKAGQVLAELDKRLLVSELE 102

Query: 98  LKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
               +++  +  +  +K   D    L  K  + +  +E+ E           S+ + V  
Sbjct: 103 NANANLQTRQVELILQKQNYDRQKGLWEKQAISKVDWENAESTYQTAQLAVTSSKAAVLK 162

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +  Y ++   +  +             +S     L +   DLT M+
Sbjct: 163 AQTNLGYATITSTIDGVVISRAVEEGQTVAASFSTPTLFTIANDLTKMR 211


>gi|313201699|ref|YP_004040357.1| RND family efflux transporter MFP subunit [Methylovorus sp. MP688]
 gi|312441015|gb|ADQ85121.1| efflux transporter, RND family, MFP subunit [Methylovorus sp.
           MP688]
          Length = 361

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 22/197 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + DL Q+E    ++   LR+   +   +         E   +   YL        + +  
Sbjct: 103 KADLAQKEADALEAEANLRQAELDANRVKGLAKGALSE--QQVVQYLTTEQTAKAKFESA 160

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A   S+         +  I++P  GTI  +++ +  +     + L ++V        R 
Sbjct: 161 VAALESQ----RLRLRRTRIVAPEFGTI-SSRTATVGSVVNAGEELFRLV-MQDRLEWRG 214

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +V   ++  VK G   T+         +      +  I P ++Q   N        V + 
Sbjct: 215 EVGATELASVKPGQAVTLT----PTGSQALVTGKVRVIAPTMNQDTRNT------LVYVD 264

Query: 393 ITDLAFSDNNIELRNGF 409
           I        +  L++G 
Sbjct: 265 IPQ----GVDGPLKSGM 277



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 57/151 (37%), Gaps = 5/151 (3%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +K   V  G+++ +G  L  F+D       DL +     L    +  ++ LD   N+  
Sbjct: 76  RLKAVYVNVGNKVKKGQLLAEFDDETVKA--DLAQKEADALEAEANLRQAELD--ANRVK 131

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            L K   S E+Q++ +L    +  +K  +   +   + L+++ TR+ +     +     +
Sbjct: 132 GLAKGALS-EQQVVQYLTTEQTAKAKFESAVAALESQRLRLRRTRIVAPEFGTISSRTAT 190

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                        L M   L  +  V   +L
Sbjct: 191 VGSVVNAGEELFRLVMQDRLEWRGEVGATEL 221


>gi|190149684|ref|YP_001968209.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307262992|ref|ZP_07544614.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|189914815|gb|ACE61067.1| probable macrolide-specific efflux protein [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306871618|gb|EFN03340.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 393

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 83/230 (36%), Gaps = 25/230 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLR---HINELYDEANLEFANYLKEISRDLEQNQ 270
           N L+  E  +     +L+      +        +N+LY + +   +++ +     L   +
Sbjct: 97  NSLSTAEATLSSYQAQLKSAQVALEVAQSNFNRLNKLYKQQSASQSDF-ETAKNTLASAR 155

Query: 271 RTFADEMSKLTILE-------KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            T  +  +++   +              I+SP+ GTIV     S       +Q    IV 
Sbjct: 156 ATVDNVKAQIKSAQISVNDAKTNLNYTQIVSPMDGTIVSIPV-SVGQTVNANQTSPTIVH 214

Query: 324 HSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
            +      ++ +++   I  VK G    +RF   A+       + I+ +DP ++   ++ 
Sbjct: 215 VADLSKMLVKLEISEGDIAQVKAGQA--IRFTTLAEPNH-THNSKIDSVDPALTTLSDDN 271

Query: 382 QTQEYYEVILKITDLAFSDNNI------ELRNGFPA--EVLFTAKNTTLA 423
            + +Y E       + +  N++       LR G     +V    +   L 
Sbjct: 272 ASNKYAEKSGNTEAIYYYANSLVENSEQRLRIGMTVQGQVDIVKRENVLI 321



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 55/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+  V ++G +       E+ +  SG I    V  G Q+ +G  L   +    ++ +   
Sbjct: 44  IDKHVLATGSVRAS-KRTEVGAQVSGKIINLYVTLGQQVKKGDLLAEIDSSNQSNSLSTA 102

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++ + +  + + + AL+   + ++ L K ++ +     DF    ++  S      + +
Sbjct: 103 EATLSSYQAQLKSAQVALEVAQSNFNRLNKLYKQQSASQSDFETAKNTLASA--RATVDN 160

Query: 160 VYRSLKMKLTRMRSIYLN 177
           V   +K     +     N
Sbjct: 161 VKAQIKSAQISVNDAKTN 178


>gi|74311338|ref|YP_309757.1| hypothetical protein SSON_0774 [Shigella sonnei Ss046]
 gi|123617673|sp|Q3Z3Z0|YBHG_SHISS RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|73854815|gb|AAZ87522.1| putative membrane protein [Shigella sonnei Ss046]
          Length = 332

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 127 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 185

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 186 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 243

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 244 RAYVDERYLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 300

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 301 VYRLRIVVTDADDA-----LRQGMPVTV 323


>gi|121582765|ref|YP_973207.1| RND family efflux transporter MFP subunit [Polaromonas
           naphthalenivorans CJ2]
 gi|120596027|gb|ABM39465.1| efflux transporter, RND family, MFP subunit [Polaromonas
           naphthalenivorans CJ2]
          Length = 366

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 72/233 (30%), Gaps = 21/233 (9%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            R+++ ++ S     +   + D      L  +  +  +D+    R    +       + +
Sbjct: 68  QRVEVASRLSGYIRDMLVQEGDRVRRGQLLTR--LDASDVEGGIRQGQAAGGAAEAALRD 125

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +  L     L++  ++   N L+++    E  +       + L      R    I SP+
Sbjct: 126 AQIDLERFQRLFERGSVS-DNELRKVRLKFEAAREARNQARAGLDTALAQRAYAEITSPV 184

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +V     +  + A    PL+ +    +       V   Q+  +  G    V      
Sbjct: 185 DGVVVARHKRT-GDLALPGMPLLTL-ESGRGLLFETFVAEGQVAAIAAGQPVQVNIDGVP 242

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                  K  + ++         +      Y+V + + + A       L  G 
Sbjct: 243 A----ALKGTVSRVVRSGDPVSRS------YQVKITLPETA------GLMPGM 279



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 5/130 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S   P+E +   S   +  D  VE+ S  SG I+   V+ G ++ +G  L   +  +   
Sbjct: 51  SAGAPLEYTAVGS---VVSDQRVEVASRLSGYIRDMLVQEGDRVRRGQLLTRLDASDVEG 107

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            I   + +       +    + +D    +      +    E + +    +          
Sbjct: 108 GIRQGQAAGGAAEAAL--RDAQIDLERFQRLFERGSVSDNELRKVRLKFEAAREARNQAR 165

Query: 155 YGISSVYRSL 164
            G+ +     
Sbjct: 166 AGLDTALAQR 175


>gi|109896614|ref|YP_659869.1| membrane fusion protein [Pseudoalteromonas atlantica T6c]
 gi|109698895|gb|ABG38815.1| membrane fusion protein [Pseudoalteromonas atlantica T6c]
          Length = 342

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 64/166 (38%), Gaps = 7/166 (4%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNED---NVVEIKSPFSGIIKKF 70
           P +   +  L +  +I  +      P   +   +G + + D    +  I +  +G I+ +
Sbjct: 21  PKTHTTIIWLVVTLVIAAVLLLTFTPWVQTAYGTGSVNSPDPLYRIQPISALLNGQIETW 80

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR----CHIDTEKSALDFLNNKYDV 126
            V  G  + +G P++T  D+++  L  L+   +   +      +  + +  +    K  +
Sbjct: 81  HVREGDNVKKGEPIVTLVDVDSDRLEKLRSQQVAANQRYVSNKLSVQNALSNLSRQKKLL 140

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            E     +E + ++   +     +      + ++  +L  + TR +
Sbjct: 141 KEGLVSQKEVEAVEIALEKLKAEASKTEEDLDTLKMTLARQETRTK 186



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 63/179 (35%), Gaps = 13/179 (7%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQ 268
           V  + L +       +      N    +N L +++      +  L     ++ +   LE+
Sbjct: 100 VDSDRLEKLRSQQVAANQRYVSNKLSVQNALSNLSRQKKLLKEGLVSQKEVEAVEIALEK 159

Query: 269 NQRTFADEMSKLTILEKTREQKTIL---SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
            +   +     L  L+ T  ++      +P+ GT+V  QS  S+ Y      L   VP +
Sbjct: 160 LKAEASKTEEDLDTLKMTLARQETRTKYAPMDGTVVRLQSGGSATYVTAGSILGWFVPAN 219

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRF---PHYADI-----REKKFKAIIEKIDPIISQ 376
               I  K+         KG    ++F   P +            F+ ++  ++P+  Q
Sbjct: 220 IERQISIKINGLDAALATKGKKVRIQFEGWPTFQFSGWPGMSVGTFEGVVSFVEPVADQ 278


>gi|331015190|gb|EGH95246.1| HlyD family secretion protein [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 388

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 52/140 (37%), Gaps = 5/140 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V  G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVREGQQVKAGELLATLDDRSIRASLEQTRAQL 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +D   + LD    +    +     +       L +  +  ++     I++    
Sbjct: 114 TQSKAQLDV--AQLDLKRYRQLTEDNGISRQTFDQQQALVRQLAATAQGNEASINAAQVQ 171

Query: 164 LKMKLTRMRSIYLNRLDLEN 183
           L    T++RS    R+ + N
Sbjct: 172 LS--YTQIRSPVTGRVGIRN 189



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 40/127 (31%), Gaps = 17/127 (13%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L  +       +   E +       +R ++ + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVREG----QQVKAGELLATLDDRSIRASLEQTRAQLTQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q   T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTEDNGISRQTFDQQQALVRQLAATAQGNEASINAAQVQLSYTQIR 178

Query: 294 SPIAGTI 300
           SP+ G +
Sbjct: 179 SPVTGRV 185


>gi|188583803|ref|YP_001927248.1| polysaccharide export protein [Methylobacterium populi BJ001]
 gi|179347301|gb|ACB82713.1| polysaccharide export protein [Methylobacterium populi BJ001]
          Length = 439

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/204 (10%), Positives = 62/204 (30%), Gaps = 2/204 (0%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            E    +   +  +++L      +++    L  + D   +     +E +           
Sbjct: 152 TELKAEVLTARERLRSLELARLAQRARQLRLEAQRDG--RTSFVSDELIGPEATALLRGE 209

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            ++F     +    + +   ++  +   R  L  + +L+   +   +  +     L +  
Sbjct: 210 QEIFALQRETERSEVGLLRQQVERLETERASLTQQRALIDEQVKLTEAQVRNYARLTDNG 269

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              Q  +  ++R   +   EL     +         EL          + + +  DL+  
Sbjct: 270 HGLQTIMVDRQRENARVRAELARIDADLARNATASGELTLRQRDTENGHRRRVVADLQAT 329

Query: 270 QRTFADEMSKLTILEKTREQKTIL 293
           ++   +  + L I     E +   
Sbjct: 330 RQQLLETEASLPIARDLLESRARR 353


>gi|330501290|ref|YP_004378159.1| secretion protein HlyD family protein [Pseudomonas mendocina NK-01]
 gi|328915576|gb|AEB56407.1| secretion protein HlyD family protein [Pseudomonas mendocina NK-01]
          Length = 354

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +   +V+ G  +  G  L   +       +   +  ++      +T  S +    ++ 
Sbjct: 55  GRVASIEVDEGDFVEPGQVLARMDTQVLEAQLAQARAQLRQAENGQNTAASQIRLRESEK 114

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E     R+ +L     +     S+      +   + L   L R++S          +
Sbjct: 115 LTAEAVVRQRQAELDA--ARKRHARSETLVKRNAMAQQQLDDDLARLQSAEAALAAARAQ 172

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            S   A +++ Q      ++  +    S   L
Sbjct: 173 VSSAEAGIAAAQSQAIEAQSATDAARASVERL 204


>gi|298530350|ref|ZP_07017752.1| efflux transporter, RND family, MFP subunit [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509724|gb|EFI33628.1| efflux transporter, RND family, MFP subunit [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 413

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 68/217 (31%), Gaps = 28/217 (12%)

Query: 207 EKNAVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANY 258
           E   V ++ L       +  R +      L E     +N+ R+        + E      
Sbjct: 104 EGGFVGKDKLLFEIEEQKLLRRLSSQEAALEEAQARLENLRRNHQRFSILLSQEVVSQEE 163

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             ++  DLE  +       + +  + +  +   I +P  G I   +      +  Q + L
Sbjct: 164 YDQVKTDLETTKAQVRRLEADVEHVREEIDDTVIRAPFDGLIAE-RLVDPGTFVSQGETL 222

Query: 319 --MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
             M  V       I   +  K     + G    V  P Y  +    F+  ++ I P I +
Sbjct: 223 TVMYQV---DPLKISFFLPEKYFAQAELGQKVRVAVPAYPGM---SFEGEVDYISPSIDE 276

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                     + V   I      + +  LR GF A+ 
Sbjct: 277 STRK------FRVRADI-----ENPDNLLRPGFFAQA 302



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 48/136 (35%), Gaps = 11/136 (8%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +V   G +      V+IK   SG IK    + G  + +   L   E+ +    +  ++ 
Sbjct: 73  ETVRGVGTLRPV-QRVDIKPETSGRIKAAHFQEGGFVGKDKLLFEIEEQKLLRRLSSQEA 131

Query: 102 SIKNLRCHIDTEKSALDFL----------NNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           +++  +  ++  +                  +YD ++   E+ + Q+            +
Sbjct: 132 ALEEAQARLENLRRNHQRFSILLSQEVVSQEEYDQVKTDLETTKAQVRRLEADVEHVREE 191

Query: 152 VFNYGISSVYRSLKMK 167
           + +  I + +  L  +
Sbjct: 192 IDDTVIRAPFDGLIAE 207


>gi|170720081|ref|YP_001747769.1| secretion protein HlyD family protein [Pseudomonas putida W619]
 gi|169758084|gb|ACA71400.1| secretion protein HlyD family protein [Pseudomonas putida W619]
          Length = 405

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 97/318 (30%), Gaps = 39/318 (12%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS---KVFNYGISSVYR 162
           L   +   +  +        V E   E  +    D       T     ++       +  
Sbjct: 49  LVGRVQAVRQQIQAAPFDGVVAEVEVEPGQRVAPDQPLFRLDTAQLDVQIRQAEAEWLKA 108

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
              +++ +                  RA L++ Q  L   + LFE+  V++ +++   + 
Sbjct: 109 RASLRVLQGWQTGPQVARARRAMLGARAALATSQAALADTRRLFERGIVARIEVDGLAQQ 168

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           V      LR+                 E  L       ++  +L   Q   A+  ++   
Sbjct: 169 VVAQREALRDA----------------EQELNLVRERGQVD-ELRIAQMELANTHARWQA 211

Query: 283 LEKTREQKTILSPIAGTIVYN--------QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
               RE++ + +P A  +V          +         Q  PL+ +V       + A V
Sbjct: 212 RLAQRERRIVKAPFAALVVRADNAGGGASRHLQPGQQVSQGAPLLTLV-DLSQLQVLAAV 270

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               +  +++G    V          +     ++++     Q  N+     +Y+V + + 
Sbjct: 271 QEHDLDRLREGLEVEVIIA------GQPLAGQVQRV---ALQARNDEGQGAWYDVRVALE 321

Query: 395 DLAFSDNNIELRNGFPAE 412
                   + LR G  A+
Sbjct: 322 MPREPSTPL-LRLGMTAQ 338



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 91/278 (32%), Gaps = 18/278 (6%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKS-PFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
            W     +E  V   G +       +I++ PF G++ + +VE G ++    PL   +  +
Sbjct: 36  LWVEPQRLESRVGLVGRVQAV--RQQIQAAPFDGVVAEVEVEPGQRVAPDQPLFRLDTAQ 93

Query: 92  TTDLIDLKKVSIKNLRCHIDTE---KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
               I   +      R  +      ++       +  +L         Q      +    
Sbjct: 94  LDVQIRQAEAEWLKARASLRVLQGWQTGPQVARARRAMLGARAALATSQAALADTRRLFE 153

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              V    +  + + +  +   +R      L+L  +   +  L  +  +       L   
Sbjct: 154 RGIVARIEVDGLAQQVVAQREALRDAE-QELNLVRERGQVDELRIAQME-------LANT 205

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           +A  Q  L Q+ER + K+         +        +    +   + A  L  +  DL Q
Sbjct: 206 HARWQARLAQRERRIVKAPFAALVVRADNAGGGASRHLQPGQQVSQGAPLLTLV--DLSQ 263

Query: 269 NQRTFADEMSKLTILEKTREQKTILS--PIAGTIVYNQ 304
            Q   A +   L  L +  E + I++  P+AG +    
Sbjct: 264 LQVLAAVQEHDLDRLREGLEVEVIIAGQPLAGQVQRVA 301


>gi|156465259|gb|ABU68077.1| SpiD2 [Streptococcus pneumoniae]
          Length = 311

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 87/290 (30%), Gaps = 12/290 (4%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +       ++ S      I+ V + +        +I  NR  L   +     L       
Sbjct: 21  VSNQANLANSSSSAIEQEITKVQQQIGEYQELRDAIINNRARLPTSNPHQSILNRYLVAS 80

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               +   E+  +SQ  +NQ    +  S   L+       ++  + N L  +  +    +
Sbjct: 81  QGQTQGTAEEPFLSQ--INQSIAGLESSIASLKIQQAGIGSVATYDNSLAAKIEVLRTQF 138

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L+  S+     +    +   +L    +  E  T+ +P  G +  N  F   N       +
Sbjct: 139 LQTASQQQLTVENQLTELKVQLDQATQRLENNTLTAPSKGIVHLNSEFEGKNRIPTGTEI 198

Query: 319 MKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            +I P    ++   I   V    +  + KG T  ++     +         ++ ID   +
Sbjct: 199 AQIFPIITDTREVLITYYVASDYLPLLDKGQTVRLKLEKIGN-HGITIIGQLQTIDQTPT 257

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           + +     +      L   D         ++ G    V       T    
Sbjct: 258 RTEQGNLFKLTALAKLSNEDSKL------IQYGLQGRVTSVTAKKTYFDY 301


>gi|311748452|ref|ZP_07722237.1| putative cation efflux system protein [Algoriphagus sp. PR1]
 gi|126576967|gb|EAZ81215.1| putative cation efflux system protein [Algoriphagus sp. PR1]
          Length = 356

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 82/216 (37%), Gaps = 24/216 (11%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + + +   +++ D  + +  + K+ + LR    + ++M      ++   + E  + + + 
Sbjct: 88  QTVQKGEVIARLDPTEAQLQLEKAEISLRNAQADYESMKMGYETIFASDDEERKSAIDD- 146

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              L+     F  E+S L   +  R++  + +PI+G I   + F   +    SQ L +I+
Sbjct: 147 --QLKAKSGVFLAEVS-LKEAKLIRDRCELKAPISGKIADLK-FKEGSLVGASQELCEIL 202

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK-KFKAIIEKIDPIISQQDNNL 381
             +    ++ KV    I  +     A V    YA    +      +  I+PI+       
Sbjct: 203 -GTSQLILKVKVLESDISLISTNQRAEV----YAVSDSQNAIDGKVIGINPIVDDNG--- 254

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                  V + I+  +  +    L  G  A  +  A
Sbjct: 255 ------LVQVSISINSRKN----LLPGMNARAIIRA 280



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 87/255 (34%), Gaps = 33/255 (12%)

Query: 46  SSGEILNEDNVVEI--KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++G++     V  +  ++   G + +  V  G  + +G  +   +  E    ++  ++S+
Sbjct: 59  ATGKLEAASQVTAVIEQA---GFMTELNVREGQTVQKGEVIARLDPTEAQLQLEKAEISL 115

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +N +   ++ K   + +          F S +E+    +       S VF   +S     
Sbjct: 116 RNAQADYESMKMGYETI----------FASDDEERKSAIDDQLKAKSGVFLAEVSLKEAK 165

Query: 164 LKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           L      +++ I     DL+ K   L    S    ++     L  K  V ++D++     
Sbjct: 166 LIRDRCELKAPISGKIADLKFKEGSL-VGASQELCEILGTSQLILKVKVLESDISLISTN 224

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                  + ++ +     +  IN + D+  L   +                    S+  +
Sbjct: 225 QRAEVYAVSDSQNAIDGKVIGINPIVDDNGLVQVSI----------------SINSRKNL 268

Query: 283 LEKTREQKTILSPIA 297
           L     +  I +P +
Sbjct: 269 LPGMNARAIIRAPQS 283


>gi|510184|emb|CAA82975.1| liver stage antigen-1 [Plasmodium falciparum]
          Length = 493

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 72/190 (37%), Gaps = 7/190 (3%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  +  ++ E+ A + L  +   LE+   ++E+       +      ++    +      
Sbjct: 1   QEQQSDLEQERRAKEKLQEQQSDLEQDRLAKEKL---QEQQSDLEQERLAKEKLQEQQSD 57

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L+ +      +   + DLE +    +  L   Q DL   + L ++    Q    +QER  
Sbjct: 58  LEQERRAKEKLQEQQSDLEQERRA-KEKLQEQQSDLEQDR-LAKEKLQEQQSDLEQERRA 115

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQRTFADEMSKLT 281
            +   E + ++ +++     + E   +   E      L+E   DLEQ +R       + +
Sbjct: 116 KEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQS 175

Query: 282 ILEKTREQKT 291
            LE+ R  K 
Sbjct: 176 DLEQERRAKE 185



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 7/197 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 42  EQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKL---QEQQSDLEQDRLA 98

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L+ +      +   + DLE +    +  L   Q DL   + L ++    Q
Sbjct: 99  KEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRA-KEKLQEQQSDLE-QERLAKEKLQEQ 156

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQR 271
               +QER   +   E + ++ +++     + E   +   E      L+E  RDLEQ + 
Sbjct: 157 QSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQRDLEQRKA 216

Query: 272 TFADEMSKLTILEKTRE 288
                + +         
Sbjct: 217 DTKKNLERKKEHGDILA 233


>gi|251792541|ref|YP_003007267.1| AcrA protein [Aggregatibacter aphrophilus NJ8700]
 gi|247533934|gb|ACS97180.1| AcrA protein [Aggregatibacter aphrophilus NJ8700]
          Length = 326

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 69/200 (34%), Gaps = 12/200 (6%)

Query: 20  MTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           +  L +IG +    W         +    + +G +  E   +++ + + G +++  V+ G
Sbjct: 7   ILGLVVIGAVSFAVWKNQQLQAEELVGIAAVNGRL--ELKRLDVATLYPGRVEEILVQEG 64

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV----LEKAF 131
            ++    PL       +   +       K     +    + +D    +  V    L+ AF
Sbjct: 65  DEVKINQPLARLSSTISQTQVSGALAQKKRAEETVSRALAEIDACQQQAKVAKLELDNAF 124

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           + R + L+             +N  +++V  +   K     ++   +  LE   S    +
Sbjct: 125 KLRRDNLIS--STELERRQSAYNASLAAVNTTQAAKAEAEAAVAQAQAQLEKAQSQYEDM 182

Query: 192 LSSHQKDLTMMKNLFEKNAV 211
           +    KD  +   + E   V
Sbjct: 183 IIKAPKDGRLEYQIAEVGNV 202



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 90/315 (28%), Gaps = 44/315 (13%)

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            +    +    L  K   +   +  R E++L   G        +     +     +   L
Sbjct: 30  ELVGIAAVNGRLELKRLDVATLYPGRVEEILVQEGDEVKINQPLARLSSTISQTQVSGAL 89

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            + +           +    +      + +L     L   N +S  +L +++     S  
Sbjct: 90  AQKKRAEETVSRALAEIDACQQQAKVAKLELDNAFKLRRDNLISSTELERRQSAYNASLA 149

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            +                    A  E    + +    LE+ Q  + D             
Sbjct: 150 AVNTTQA---------------AKAEAEAAVAQAQAQLEKAQSQYEDM------------ 182

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYT 347
              I +P  G  +  Q     N       ++ ++ P     YI   +T  Q+  +K G  
Sbjct: 183 --IIKAPKDGR-LEYQIAEVGNVLGAGGKVVSVLDPTDT--YINVFLTAHQMNQIKLGDD 237

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKIT-DLAFSDN 401
           A +       +    F A I  +         S +    + +  ++V L+I  D+A    
Sbjct: 238 ARIVIDGINAV----FPAKITFVANNAQFTPKSVETTEERAKLMFKVKLQIPVDIALKYK 293

Query: 402 NIELRNGFPAEVLFT 416
            + L+ G  A     
Sbjct: 294 GL-LKGGMTAIGYVK 307


>gi|254515097|ref|ZP_05127158.1| secretion protein HlyD [gamma proteobacterium NOR5-3]
 gi|219677340|gb|EED33705.1| secretion protein HlyD [gamma proteobacterium NOR5-3]
          Length = 504

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 67/187 (35%), Gaps = 19/187 (10%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L +  E    A       L + + D     R   + +++L      R+  T  S   G 
Sbjct: 155 ELVNAQEELVSALRRDNARLAQAAEDRLLALRLSQEFINELKRSGDVRQTVTFRSSKKGV 214

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +          +   +  LM I    +  ++ A+V   Q   V+ G   T++      + 
Sbjct: 215 VDKLNIR-EGFFVGPNTTLMSIGALEE-VWVEAQVFESQAALVRLGQPVTMQL---DYLP 269

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK- 418
            +K++  ++ I P +      L       V L+     FS+++ ELR    A+V   ++ 
Sbjct: 270 GRKWQGEVDYIYPTLDASTRTL------RVRLR-----FSNSDGELRPNMFAQVQIHSEN 318

Query: 419 --NTTLA 423
               T+ 
Sbjct: 319 KQPRTVI 325


>gi|206563712|ref|YP_002234475.1| multidrug resistance protein MdtN [Burkholderia cenocepacia J2315]
 gi|198039752|emb|CAR55722.1| putative multidrug efflux system transport protein [Burkholderia
           cenocepacia J2315]
          Length = 349

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 69/196 (35%), Gaps = 7/196 (3%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P+   R+  L+I+ + G+   +       +  S+ +   + +VV + SP  G I +  V 
Sbjct: 9   PSVKGRVIALAIVAL-GIAALAYAYHRTTAYPSTDDASIDADVVHVASPVGGRIVQLAVH 67

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++ +G  L   + +     +   +  ++  R  +DT + +L    +   V  +  + 
Sbjct: 68  ENQRVAKGDLLYVIDPVPYRLTVAQAQADLELARASLDTRRRSLIGERSNASVAAEQVKR 127

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVY------RSLKMKLTRMRSIYLNRLDLENKSSL 187
             +         +          +S+        R     ++  ++    R   +     
Sbjct: 128 ATQNHDLATRDVNRLAPLAAQGYVSAQQFDQAKVRQRDAAVSLAQAQEQQRASAQTIGDD 187

Query: 188 LRALLSSHQKDLTMMK 203
             A+ + H ++  + +
Sbjct: 188 ADAIATLHAREAALAR 203


>gi|84623912|ref|YP_451284.1| cation efflux system protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84367852|dbj|BAE69010.1| cation efflux system protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 371

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 72/197 (36%), Gaps = 19/197 (9%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L        K+   L++   E       +      A        ++     + + R  +
Sbjct: 116 ELATAYSDAGKARATLQQARLELARQ--KVLAADSIAAARDLQAAQQAFDSAQNDARAAS 173

Query: 275 DEMSKLTILEK--TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           D +++L +  +  +  +  + +PIAG +V   +     +   S PLM  V      ++ A
Sbjct: 174 DRLAQLGVAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMT-VADISRVWLTA 232

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  ++I  V +G   T     Y     + F   ++ +D ++      L      +V + 
Sbjct: 233 SVPEREIGQVFEGQQVTASLDAYP---GQHFTGQVQHLDDLLDPTTRTL------KVRV- 282

Query: 393 ITDLAFSDNNIELRNGF 409
               A ++++  L+ G 
Sbjct: 283 ----ALNNHDGLLKPGM 295



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 36/115 (31%), Gaps = 4/115 (3%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE-TTDLIDLKKVSIKNLRC 108
           +L E  V  +  P +G +       G  +  G  L   +  E  T   D  K      + 
Sbjct: 76  VLPERLVRVV-PPLAGRVVALPKTLGDTVRAGDVLCVLDSAELATAYSDAGKARATLQQA 134

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            ++  +     L        +  ++ ++          +   ++   G+++   S
Sbjct: 135 RLELARQ--KVLAADSIAAARDLQAAQQAFDSAQNDARAASDRLAQLGVAAQATS 187


>gi|310657737|ref|YP_003935458.1| secretion protein hlyd family protein [Clostridium sticklandii DSM
           519]
 gi|308824515|emb|CBH20553.1| putative Secretion protein HlyD family protein precursor
           [Clostridium sticklandii]
          Length = 360

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/362 (13%), Positives = 105/362 (29%), Gaps = 65/362 (17%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I   +VE G  I +   + T +  +     +            +D  K+         
Sbjct: 57  GKILTIEVEEGQYIEKDDVIATIDAKDLAAKREGLVAQANAALAAVDIAKA--------- 107

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                     +     + +    L       RS  + +      
Sbjct: 108 ------------------------QQQAAEGQLEAAKALLSKAQNGARSEDIQKA----- 138

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A     +K    +  L+E+ AV+   L++ E  +  +  +L  +I +       I
Sbjct: 139 ----QANYDIMKKSYDRILALYEEGAVALAQLDEIETKLKVAEQDL--SIAKSGARAEDI 192

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                +               +  N+  +    + +T ++       I SP++G +    
Sbjct: 193 EAAKGQVAAAQGQVAAAAGSVIAANE-KYTQATAGITEVDTYITDAAIRSPLSGYVTSLN 251

Query: 305 SFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             S+         L  I    K    + A      +   K+     V    Y D    +F
Sbjct: 252 C-SAGEMLSTGMNLATITNLDKITLTVNA--DETLLPKFKENQAVKVSVLSYKDE---EF 305

Query: 364 KAIIEKID--PIISQQDNNLQTQEY----YEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
              I +I+  P  + +  + +  ++    Y + ++I      + + +LR G  A      
Sbjct: 306 NGKIVQINKKPDFAIKKASNENGDFDLITYGIKIEI-----ENKDQKLRPGMTA--FINI 358

Query: 418 KN 419
           + 
Sbjct: 359 EE 360


>gi|254442601|ref|ZP_05056077.1| efflux transporter, RND family, MFP subunit [Verrucomicrobiae
           bacterium DG1235]
 gi|198256909|gb|EDY81217.1| efflux transporter, RND family, MFP subunit [Verrucomicrobiae
           bacterium DG1235]
          Length = 394

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 73/224 (32%), Gaps = 24/224 (10%)

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             ++      AV+Q +L + +       + LR +        R I    +  N++     
Sbjct: 108 QAVRQAEADLAVAQANLAEAQ---SSLEITLRADQRTTTLRERGIASETEYDNVQAELLA 164

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG----TIVYNQSFSSSNYAQQS 315
           ++    + + Q   A+  S L           I +  AG     +V  +          +
Sbjct: 165 RQAQVKVAEAQVIRAE--SSLESARIRLGYTRITADWAGDEDRRVVAERYIDEGETVSAN 222

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           +PL+ IV           VT +    ++ G  A      + +     F+  I++I P+  
Sbjct: 223 EPLLLIVELD-PITAVIFVTERDYGSLRPGQPAHFSTDAFPNKI---FEGKIDRISPVFR 278

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +     +            +L+ ++ +  L+ G       T K 
Sbjct: 279 ESSRQARV-----------ELSLANPDGALKPGMFVRADITLKR 311



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/118 (11%), Positives = 42/118 (35%), Gaps = 3/118 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD---FLN 121
           G +    V+    + +G P+   +  E    +   +  +   + ++   +S+L+     +
Sbjct: 79  GRVIDIPVDISDTVSRGDPVAILDAAEFDQAVRQAEADLAVAQANLAEAQSSLEITLRAD 138

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            +   L +   + E +  +   +  +  ++V       +     ++  R+R  Y    
Sbjct: 139 QRTTTLRERGIASETEYDNVQAELLARQAQVKVAEAQVIRAESSLESARIRLGYTRIT 196


>gi|88860685|ref|ZP_01135322.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           tunicata D2]
 gi|88817280|gb|EAR27098.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           tunicata D2]
          Length = 418

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 90/276 (32%), Gaps = 14/276 (5%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+++ + ++  + S   G +++  VE G  + QG PL+   +      +  ++  +    
Sbjct: 68  GQVVPKTSI-YLDSIAGGQVEERLVEQGEYVEQGQPLVRLSNTSLQLDVMSREAQVTEQL 126

Query: 108 CHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
             +   +  ++   LN + D+LE   +           +   +   V    + ++ + L 
Sbjct: 127 NFLRNTQMNMETNRLNLRRDLLEIDLQISHLSRKLKQTEPLVSKGVVAQDTLDALKQDLS 186

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               R       +    +   +  A L+   K L         N     D    +  V  
Sbjct: 187 YYQARKELTLERQKQENSIREVQVAQLADSAKMLEKNLQFARDNL----DNLLVKAPVAG 242

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA---DEMSKLTI 282
              EL   I E KN    + ++      +    L E    L Q QR  A   +    +  
Sbjct: 243 YLSELDVEIGESKNRGARLGQIDIPNEYKLVVRLDEFY--LNQVQRDMAVMVELEGSIVE 300

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            + ++    +        V   + +     ++ Q +
Sbjct: 301 AKVSKIDSRVQQSQFQIEVDLPTNTKG--VKRGQSI 334


>gi|156465272|gb|ABU68089.1| SpiD2 [Streptococcus pneumoniae]
          Length = 311

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 87/290 (30%), Gaps = 12/290 (4%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +       ++ S      I+ V + +        +I  NR  L   +     L       
Sbjct: 21  VSNQANLANSSSSAIEQEITKVQQQIGEYQELRDAIINNRARLPTSNPHQSILNRYLVAS 80

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               +   E+  +SQ  +NQ    +  S   L+       ++  + N L  +  +    +
Sbjct: 81  QGQTQGTAEEPFLSQ--INQSIAGLESSIASLKIQQAGIGSVATYNNSLAAKIEVLRTQF 138

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L+  S+     +    +   +L    +  E  T+ +P  G +  N  F   N       +
Sbjct: 139 LQTASQQQLTVENQLTELKVQLDQATQRLENNTLTAPSKGIVHLNSEFEGKNRIPTGTEI 198

Query: 319 MKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            +I P    ++   I   V    +  + KG T  ++     +         ++ ID   +
Sbjct: 199 AQIFPIITDTREVLITYYVASDYLPLLDKGQTVRLKLEKIGN-HGITIIGQLQTIDQTPT 257

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           + +     +      L   D         ++ G    V       T    
Sbjct: 258 RTEQGNLFKLTALAKLSNEDSKL------IQYGLQGRVTSVTAKKTYFDY 301


>gi|121999071|ref|YP_001003858.1| RND family efflux transporter MFP subunit [Halorhodospira halophila
           SL1]
 gi|121590476|gb|ABM63056.1| efflux transporter, RND family, MFP subunit [Halorhodospira
           halophila SL1]
          Length = 371

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 60/203 (29%), Gaps = 25/203 (12%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHI--NELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           R V +   +L      Q              E      +   + +R  ++ Q   A   +
Sbjct: 108 REVDELEAQLEAARARQAYAATEYLRAAQLVEEEAITQSEYDQAARQRDEAQAEAASLQA 167

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK- 337
            L +         + +P  G +   +  +        +P+  ++       +   +  + 
Sbjct: 168 GLALARDRLAYTRLRAPFDGAVAERRFDTHEAV-PPQEPV-YLLEDLSQLEVEVGIPEEF 225

Query: 338 --QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
                H+       VR P    +    +   I  +   +  +         Y V + +T+
Sbjct: 226 MVYRDHL---QQVQVRIPALDAV----YPGRIRTVGVDVLPERQT------YPVQVALTE 272

Query: 396 LAFSDNNIELRNGFPAEVLFTAK 418
                   +L  G  AEV+F A+
Sbjct: 273 P-----GEQLLPGMTAEVIFHAE 290



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 35/121 (28%), Gaps = 9/121 (7%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   N   +     G ++    E G ++  G  L   +D +    +D  +  +       
Sbjct: 65  VAAQNRAWVSFRVGGELEGVHAEVGDRVAAGERLAELDDSDHVREVDELEAQL------- 117

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             E +         + L  A    EE +        +          +S+   L +   R
Sbjct: 118 --EAARARQAYAATEYLRAAQLVEEEAITQSEYDQAARQRDEAQAEAASLQAGLALARDR 175

Query: 171 M 171
           +
Sbjct: 176 L 176


>gi|328772567|gb|EGF82605.1| hypothetical protein BATDEDRAFT_86542 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 858

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 59/183 (32%), Gaps = 20/183 (10%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           K  +  ++  +  L     + D      E R +Q L+ L K      K            
Sbjct: 457 KRRQEELERLEKRLQEEKQRQDERRLQDEKRRQQELEELQKQRQRELKELEKQRQQELEE 516

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L+ +    + +   +   + K       L   ++    ++ L ++    Q +L + E   
Sbjct: 517 LEKQRQEEKRLQDEKRRQDEKRRQEEKRLQDEKRRQQELEELEKQ---RQQELEKLE--- 570

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                         K   + + +L  +   E     K+  ++LE+ Q+    E+ +L   
Sbjct: 571 --------------KQRQQELEKLEKQRQQELEKLEKQRQQELEKLQKQRQQELEELERK 616

Query: 284 EKT 286
            + 
Sbjct: 617 RQQ 619



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/167 (8%), Positives = 57/167 (34%), Gaps = 1/167 (0%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSL 187
           +  E R ++      +      K     +  + +  + +L  + +       +LE +   
Sbjct: 464 ERLEKRLQEEKQRQDERRLQDEKRRQQELEELQKQRQRELKELEKQRQQELEELEKQRQE 523

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            + L    ++     +   ++    +    + E +  +   EL +   +++  L  + + 
Sbjct: 524 EKRLQDEKRRQDEKRRQEEKRLQDEKRRQQELEELEKQRQQELEKLEKQRQQELEKLEKQ 583

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             +   +     ++    L++ ++   +E+ +    +   + K   +
Sbjct: 584 RQQELEKLEKQRQQELEKLQKQRQQELEELERKRQQDFEEDLKRQRA 630



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 75/209 (35%), Gaps = 19/209 (9%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E +E     + ++   + L+      +  L+ L  +     K  E + +Q L+ L K 
Sbjct: 462 ELERLEKRLQEEKQRQDERRLQDE-KRRQQELEELQKQRQRELKELEKQRQQELEELEKQ 520

Query: 146 HSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSL-LRALLSSHQKDLTMM 202
                ++ +         R  + +L   +       +LE +    L  L    Q++L  +
Sbjct: 521 RQEEKRLQDEKRRQDEKRRQEEKRLQDEKRRQQELEELEKQRQQELEKLEKQRQQELEKL 580

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           +         +    + E++  +   EL +   +++  L  +     +      ++ +++
Sbjct: 581 E---------KQRQQELEKLEKQRQQELEKLQKQRQQELEELERKRQQ------DFEEDL 625

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKT 291
            R   Q  +   D+  +  + E  ++++ 
Sbjct: 626 KRQRAQKFQERLDKERQQELEELEKQRQE 654



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 54/179 (30%), Gaps = 3/179 (1%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           D ++   + L  +    E+     E +L +   +      +          R  +++   
Sbjct: 408 DAKQQRDEELEQEQKRQEEKQRQEERRLQEEKRRQEEKRRQEERRLQDEKRRQEELERLE 467

Query: 171 MR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE--RIVYKST 227
            R      R D        R      +      + L E     Q +L + E  R   K  
Sbjct: 468 KRLQEEKQRQDERRLQDEKRRQQELEELQKQRQRELKELEKQRQQELEELEKQRQEEKRL 527

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            + +    E++       +       E     K+  ++LE+ ++    E+ KL    + 
Sbjct: 528 QDEKRRQDEKRRQEEKRLQDEKRRQQELEELEKQRQQELEKLEKQRQQELEKLEKQRQQ 586


>gi|254521068|ref|ZP_05133123.1| secretion protein HlyD family protein [Stenotrophomonas sp. SKA14]
 gi|219718659|gb|EED37184.1| secretion protein HlyD family protein [Stenotrophomonas sp. SKA14]
          Length = 360

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/273 (12%), Positives = 85/273 (31%), Gaps = 16/273 (5%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L+     + +      + +   +   +L+   +  + + ++     +  Q    +  
Sbjct: 81  QVALQAARADLANARAQLANAQAALAQQGSLIEQARASVDVSRSELSLASADQQRYRELA 140

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R    +    ++   +Q     H+ +   +A L  A    +I     Q  +         
Sbjct: 141 RDGAGTVQNAQQAQSKQAVASAHLQQ--GQAALSTARQRTDILTAGVQAAQAAVQRAEAA 198

Query: 281 TILEK-TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
               +       + +PI G +   ++  +  Y     P+  +VP  +   + A     Q+
Sbjct: 199 QARAELDLSHTVLRAPIDGMV-GRRAVRAGAYLAPGTPVAAVVPLKRAFVV-ANFQETQM 256

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----SQQDNNLQTQEYYEVILKITD 395
             ++ G    ++   +     K  +  I+ I P      +       T  + +V+ +I  
Sbjct: 257 TRMQAGQQVELKVDVFP---GKSLRGHIDSIAPATGVTFAAVAPENATGNFTKVVQRIPV 313

Query: 396 LAFSDNN----IELRNGFPAEVLFTAKNTTLAQ 424
               +       +LR G   E      +    Q
Sbjct: 314 KILLEPGQPLLEQLRAGMSVEARVDLDSRVRVQ 346



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/125 (10%), Positives = 38/125 (30%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +   +V++   +  G  L   +D +    +   +  + N R  +   ++AL    +  
Sbjct: 53  GFVSSVEVDDNQPVKAGDVLARIDDRDYQVALQAARADLANARAQLANAQAALAQQGSLI 112

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +    + +    +L               +   +            + S +L +      
Sbjct: 113 EQARASVDVSRSELSLASADQQRYRELARDGAGTVQNAQQAQSKQAVASAHLQQGQAALS 172

Query: 185 SSLLR 189
           ++  R
Sbjct: 173 TARQR 177


>gi|149187564|ref|ZP_01865861.1| hypothetical protein VSAK1_22629 [Vibrio shilonii AK1]
 gi|148838444|gb|EDL55384.1| hypothetical protein VSAK1_22629 [Vibrio shilonii AK1]
          Length = 378

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 71/193 (36%), Gaps = 16/193 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G I+   + V IKS   GI+ +  V  G ++ QG PL+      T   +   
Sbjct: 42  IEKQAVAVGNIVPA-HSVSIKSQIDGIVGEIYVSVGEKVKQGQPLIKVRPNPTPQALTDA 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
              +      +++ K  L   N K  V +       ++ +       S  + V     + 
Sbjct: 101 STDLMRSEAELESAKQKLA--NLKSLVEQDIIPKNYDEYVSARSSVKSAQANVLQKRQNL 158

Query: 159 SVYRSLKMKLTRMR-----------SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLF 206
            + RS +  +   R           ++   ++++ E   S      ++    L  M +L 
Sbjct: 159 ELIRSGEASIGNARLTSTIYAPIDGTVLNRKVEVGEPIISTQSNQEATAMMSLADMNSLI 218

Query: 207 EKNAVSQNDLNQQ 219
            K +VS++D  Q 
Sbjct: 219 FKGSVSEHDAAQL 231



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 76/219 (34%), Gaps = 22/219 (10%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S  EL     +  N+   + +     N    +   + +K    ++ Q ++
Sbjct: 97  LTDASTDLMRSEAELESAKQKLANLKSLVEQDIIPKNYDEYVSARSSVKSAQANVLQKRQ 156

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHS 325
                 S    +   R   TI +PI GT++  +              Q++  +M +    
Sbjct: 157 NLELIRSGEASIGNARLTSTIYAPIDGTVLNRKV-EVGEPIISTQSNQEATAMMSLA-DM 214

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
                +  V+      +  G    +    Y D+   +   ++ K+  I S+  N+  +  
Sbjct: 215 NSLIFKGSVSEHDAAQLSPGMPVVLTVAPYPDV---EITGVLSKV-AIQSENLNSPASNS 270

Query: 386 YYEVI-----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +       +++ +L+     + LR+GF +    T K 
Sbjct: 271 SAKSFDNGFGVEVGELSI-PKGVVLRSGFSSTAKITLKK 308


>gi|84625412|ref|YP_452784.1| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|84369352|dbj|BAE70510.1| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 358

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 85/297 (28%), Gaps = 32/297 (10%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V + A   R + L     + ++   +  N  + +   +L     +  S      +  
Sbjct: 76  QVPVQDFAHVKRGQLLAKIDDRIYAQQLEQANAQMQTAQANLANWEQQRHSAEATIAEQR 135

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  +A     +      + L  +  VS+ D               R+     +    
Sbjct: 136 AALSSNQAQRDRTRSAYARTQQLASQQLVSEQD---------------RDTAFAARAQAD 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                   A        + ++ +    +   A+  + + + +   +   IL+P  G    
Sbjct: 181 AGVVQARAAVQAAEENARGVTVNRAALEAAVANAQAAVRLAQINLDNTRILAPRDG---Q 237

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP     +I A     Q+  ++ G  A+       + R   
Sbjct: 238 LGVR-QGAYVTNGTQLMSLVP--DTLWIVANFKETQMAKIRIGQRASFTVDALDNAR--- 291

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPA 411
               ++ I P    +      +     + ++  +I      D +      LR G   
Sbjct: 292 LHGRVQDISPAAGSEFSVLPADNAAGNFVKIAQRIPLRISVDPDQPLAPRLRPGMSV 348



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 52/169 (30%), Gaps = 11/169 (6%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSI-----------LLPIEISVSSSGEILNE 53
           M      + PA  +R     I G+IG    ++           L P   ++  +   L  
Sbjct: 1   MNTPADSSPPACRQRRRRSRIAGVIGFGGLALIGVALVLYAWRLPPFVSAIERTENALVL 60

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             +  I    SG + +  V++ + + +G  L   +D      ++     ++  + ++   
Sbjct: 61  GQITVIAPQVSGYVTQVPVQDFAHVKRGQLLAKIDDRIYAQQLEQANAQMQTAQANLANW 120

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +               A  S + Q       Y  T        +S   R
Sbjct: 121 EQQRHSAEATIAEQRAALSSNQAQRDRTRSAYARTQQLASQQLVSEQDR 169


>gi|326799109|ref|YP_004316928.1| efflux transporter RND family, MFP subunit [Sphingobacterium sp.
           21]
 gi|326549873|gb|ADZ78258.1| efflux transporter, RND family, MFP subunit [Sphingobacterium sp.
           21]
          Length = 377

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 79/230 (34%), Gaps = 25/230 (10%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +  + L    +    + + L ++   VS+  L  +   +    L L     E        
Sbjct: 80  AAWQDLSLLAENSGRVTQILVDEGSHVSRGQLLTR---IDDEYLNLDLEAAEDALSKLKT 136

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           ++   E++ +     K     L++      +  +K+   ++      I +PI+G +   +
Sbjct: 137 DQQRYESSFKTGGVTK---AQLDEINLNVRNAENKVQQAKRRLADAYIKAPISGIVNK-R 192

Query: 305 SFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +     Y      L  IV  S+    + A  +  Q+ ++K G   ++    + D   KKF
Sbjct: 193 NIEVGTYVSPGTALFDIVDVSRLKLLVNANES--QVVNLKVGDPVSITTTVFPD---KKF 247

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
              I  I        N       Y V +++ + +       L+ G  A  
Sbjct: 248 SGKISFIAAKADNTLN-------YPVEIQVENSSTQQ----LKAGMYATA 286



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 67/205 (32%), Gaps = 32/205 (15%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSIL-------LPIEISVSSSGEILN- 52
           M HF+W+   +         TLL ++G + +I W +           +I    +G ++  
Sbjct: 1   MVHFIWQVKHKYIQMKRIIFTLLIVLGALAIIAWVLNNNKKENQAKTDIVAKGTGAVVVR 60

Query: 53  -EDNVVEIKSPF-------------------SGIIKKFQVENGSQILQGTPLLTFEDIET 92
                    +                     SG + +  V+ GS + +G  L   +D   
Sbjct: 61  TTTASKSAINLDFSSNGNFAAWQDLSLLAENSGRVTQILVDEGSHVSRGQLLTRIDD--- 117

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            + ++L   + ++    + T++   +       V +   +     + +   K      ++
Sbjct: 118 -EYLNLDLEAAEDALSKLKTDQQRYESSFKTGGVTKAQLDEINLNVRNAENKVQQAKRRL 176

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLN 177
            +  I +    +  K       Y++
Sbjct: 177 ADAYIKAPISGIVNKRNIEVGTYVS 201


>gi|313669441|ref|YP_004049868.1| secretion protein HlyD family protein [Sulfuricurvum kujiense DSM
           16994]
 gi|313156638|gb|ADR35315.1| secretion protein HlyD family protein [Sulfuricurvum kujiense DSM
           16994]
          Length = 333

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 77/280 (27%), Gaps = 39/280 (13%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            G+Y  +   V       +   +     ++     N+    +      + LS  QK+L  
Sbjct: 67  EGEYVRSGEVVARLDTGELDARMAQAHAQIEQAIQNKKYALDLVRQHESELSFSQKNLVR 126

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            KNL+  N +S   L Q E  V      L     +       IN    ++    +N    
Sbjct: 127 SKNLYINNNISLVQLQQNETAVESMRAALNAAKTQVYAADAAINAAEAQSRTIQSN---- 182

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
                                         + SPI   ++Y +             +  +
Sbjct: 183 -------------------------LNDCILRSPINAQVLY-KLIEQGEVIGSGGKVATL 216

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           +  +   Y+   V       +K G  A +      +       A +  + P        +
Sbjct: 217 LDLND-IYMTIFVPTSYAGRIKVGSDARILLDALPNS---AIAAKVSFVSPDAQFTPKEI 272

Query: 382 QTQE-----YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +T+       + + +KI         + + +G P      
Sbjct: 273 ETKSEREKLMFRIKVKIDQNLLRSGKLHINSGVPGIAYIR 312



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 63/189 (33%), Gaps = 9/189 (4%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEIS---VSSSGEILNEDNVVEIKSPFSG 65
           + R     +     +  + +IG          +I       +G +   +  V++ S   G
Sbjct: 1   MNRKILKWVGYTLAVLFLIVIGKYVTDYFSKPDIPDPFALGNGRVEATE--VDVASKLPG 58

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I    VE G  +  G  +   +  E    +      I+     I  +K ALD +     
Sbjct: 59  RIVYIGVEEGEYVRSGEVVARLDTGELDARMAQAHAQIEQ---AIQNKKYALDLVRQHES 115

Query: 126 VLEKAFESREEQLLDFLGKYHSTCS-KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            L  + ++       ++    S    +     + S+  +L    T++ +        E +
Sbjct: 116 ELSFSQKNLVRSKNLYINNNISLVQLQQNETAVESMRAALNAAKTQVYAADAAINAAEAQ 175

Query: 185 SSLLRALLS 193
           S  +++ L+
Sbjct: 176 SRTIQSNLN 184


>gi|166091538|ref|YP_001653989.1| hypothetical protein pFR12.5_01 [Bacillus thuringiensis]
 gi|165875315|gb|ABY68471.1| hypothetical protein pFR12.5_01 [Bacillus thuringiensis]
          Length = 233

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 9  LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDN--VVEIKSPFSGI 66
          L+R  P  +       I+  +  + W+    ++  + S G ++ ++      ++S   GI
Sbjct: 17 LERKPPRFIIWFLSGLILLFVIFVVWAYFGKVD--IVSKGTVIIQNKFESSLVRSKNKGI 74

Query: 67 IKKFQVENGSQILQGTPLLTF 87
          +    V++G  +  G  L   
Sbjct: 75 LDNVLVKSGDFVKTGDVLFQI 95



 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 64/152 (42%), Gaps = 16/152 (10%)

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV--TPK 337
           L  +++  E   + + + G + +N +  S +  +  + ++ IVP +     RA++  +P+
Sbjct: 92  LFQIKEENENVFVKASMDGEVQFNSTIQSGDLIESGKEILSIVPKN--LEKRARIILSPQ 149

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDL 396
             +++KKG      F        ++    I +I  I ++   N + + Y YE+   I   
Sbjct: 150 DRKNIKKGDKIIYSF------NTERIDKYIGEIVYIAAEPVYNKEFKSYMYELEATIDS- 202

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
               NN EL  G   +      +  + + ++ 
Sbjct: 203 ----NNDELYAGMMGQGSVLIGSEPIWKFLLK 230


>gi|116694736|ref|YP_728947.1| multidrug resistance efflux pump [Ralstonia eutropha H16]
 gi|113529235|emb|CAJ95582.1| multidrug resistance efflux pump [Ralstonia eutropha H16]
          Length = 460

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 89/297 (29%), Gaps = 22/297 (7%)

Query: 27  GIIGLITWSILLPI--EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           G++  I W++L  +   +   SS   +    V  + SP  GI+ K  V  G        L
Sbjct: 50  GVVLFIIWAVLTIMFPNVFTRSSERAVVNSPVSLVTSPVEGIVTKQMVAAGQSFSANQAL 109

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +    ++  ++     V +   +        +          L  A E   ++      +
Sbjct: 110 MI---VQNPNIDRSLLVDLTGKKLDNQQRHDSARARLESNRRLMAATEQDLQRYNSAAQR 166

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLT---RMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            H    +     ++S       +     R +++       E  ++  R  LS        
Sbjct: 167 EHGARVRALEARLASARAQEDQQQEVVNRNQNMQWAGAVSEAYTNASRYQLSMLSNAKAA 226

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            K   + NAVS ++       VY S+ +       Q+  +         A LE      +
Sbjct: 227 AKAELD-NAVSVSE--AARNKVYASSTDGPSATLAQRRQVLGAESAQLTAELEQLEAYGK 283

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
              ++   ++   D +S L           I S   GTI                 L
Sbjct: 284 SVDEMIATEQERLDRLSNL----------EIRSAEPGTIEDL-IAQPGMRVAAGATL 329


>gi|17989148|ref|NP_541781.1| multidrug resistance protein A [Brucella melitensis bv. 1 str. 16M]
 gi|260564566|ref|ZP_05835051.1| secretion protein HlyD [Brucella melitensis bv. 1 str. 16M]
 gi|17984999|gb|AAL54045.1| multidrug resistance protein a [Brucella melitensis bv. 1 str. 16M]
 gi|260152209|gb|EEW87302.1| secretion protein HlyD [Brucella melitensis bv. 1 str. 16M]
          Length = 314

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/396 (12%), Positives = 114/396 (28%), Gaps = 85/396 (21%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M+LL +I  +  +  +            GE +    +   +      ++   V+ G ++ 
Sbjct: 1   MSLLCVIPFVSSLFAACGTQSLAVGYVEGEFVQLAPLQVAQ------VRDIAVKRGDRVE 54

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P+ T ED +                  I   ++       +  +       R E++ 
Sbjct: 55  AGEPITTVEDTD----------------ARIAVAQAEAALAQAQAQLANLQVGKRPEEIA 98

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                                                    LE      RA     Q+ L
Sbjct: 99  V----------------------------------------LEAAVRSARAQADDAQRTL 118

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++L  +   +Q  L+     +  +   + ++       +  +    +E         
Sbjct: 119 LRTRDLARRGVATQAQLDDAATQLEVAEAAIGQSTANL--AVGKLPARPEEIKA------ 170

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                     +       ++L   +  R Q+TI +P AG I      +  + A  S P++
Sbjct: 171 ---------AENAVKSAEAQLQTAKWQRAQRTIEAPAAGRITDV-VRNLGDIAGPSAPVL 220

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++P      ++  +  ++   V  G         + D      +A +  + P       
Sbjct: 221 TMLP-DGAVKLKVYIPEERFSDVAVGSV----LSVHCDGCAPGLQARVSYVSPDPEFTPP 275

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + + E  + ++ + +    D    L+ G   +V  
Sbjct: 276 VIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 311


>gi|262192328|ref|ZP_06050483.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae CT 5369-93]
 gi|262031821|gb|EEY50404.1| ABC-type protease exporter membrane fusion protein (MFP) family
           component PrtE/AprE [Vibrio cholerae CT 5369-93]
          Length = 54

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 389 VILKITDLAFS-DNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
           V ++  +     D N+ +  G  A V       T+   ++ PI 
Sbjct: 2   VRVRTKETTLGHDQNLPIIPGMTASVDIITGKRTVLDYLLKPIL 45


>gi|225871002|ref|YP_002746949.1| bacteriocin secretion protein [Streptococcus equi subsp. equi 4047]
 gi|225700406|emb|CAW94776.1| bacteriocin secretion protein [Streptococcus equi subsp. equi 4047]
          Length = 452

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 138/410 (33%), Gaps = 36/410 (8%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           EI+V+S GEI     +  ++S  +  I    + N   I QG  ++ +      DL + +K
Sbjct: 44  EITVTSYGEITPTQVIATVQSISNNPIIANHLTNNQPIKQGDSIIQY----AKDLEESQK 99

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++      + +KS+L+ L       +  F++ ++        +  + ++  + G S +
Sbjct: 100 QVLEKQLATYEKQKSSLNTLLLSLKQGQNLFQNDDQFGYVNTFNHFMSQAQDIDLGFSKI 159

Query: 161 YRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-----------L 205
                 +   ++    +I      L  + S    L S+       + +           L
Sbjct: 160 KAETSQQAQLIQDSIVAINQQINSLSQQISDYEELRSAIINQSDSLSSNNPHQATLDAYL 219

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-------NELYDEANLEFANY 258
            +  A  +   NQ    + ++ L L+ +I        ++       N L  +  +    +
Sbjct: 220 SQSQANQETATNQLLFQIDQNLLNLKTSIDSLYRQRANLHQSTSYDNSLNTKLEILRTQF 279

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L   S+ L        +  ++L           I +  +G +  N +F           +
Sbjct: 280 LITASQQLTDVNHHITELKAQLEQATLQVNNLVIKASKSGIVQLNSAFEGKISIPIGHDI 339

Query: 319 MKIVP---HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             I P    +K   +   V+ + +  +KK     +    + +         I+ ID + +
Sbjct: 340 AYIYPSLKQTKQALLTYYVSSESVSLLKKNQVVRLALDRHGNQPI-VITGTIKTIDELAT 398

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           +          ++V  K+T       +  ++ G    V+      T    
Sbjct: 399 KTKQGNL----FKVTAKLT--LSEKESTTIQYGQQGRVISVIAKKTFFDF 442


>gi|221209759|ref|ZP_03582740.1| multidrug resistance protein MdtN [Burkholderia multivorans CGD1]
 gi|221170447|gb|EEE02913.1| multidrug resistance protein MdtN [Burkholderia multivorans CGD1]
          Length = 349

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/369 (12%), Positives = 102/369 (27%), Gaps = 81/369 (21%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P+   R   L+I+ + G+   +       +  S+ +   + +VV + SP  G I +  
Sbjct: 7   SRPSVKGRAIALAIVAL-GIAALAYAYHRTTAYPSTDDASIDADVVHVASPVGGRIVRLA 65

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V    ++ +G  L   + +            +   +   D E +                
Sbjct: 66  VHENQRVAKGDLLYEIDPVPYR---------LAVAQAQADVELARA-------------- 102

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                                          SL  +   +     N      +    +  
Sbjct: 103 -------------------------------SLDTRRRSLIGERSNAAVAAEQVKRAKQN 131

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                +D+  +  L  +  VS    +Q +     + + L +   +Q+   + I       
Sbjct: 132 HDLATRDVERLAPLAAQGYVSAQQFDQAKVRQRDAAVSLAQAQEQQRASAQTIG------ 185

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                        D      T     + L   +   E   + +P  G +      +    
Sbjct: 186 -------------DEADAIATLHAREAALARAQHALEDTVVRAPHDGLVTGLTVLA-GET 231

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKI 370
              +Q +  ++  S+   +        +  +  G  ATV    Y+ I R +     +  I
Sbjct: 232 LAPNQSIFTLIDASEWFAV-GNFRETSLNRIAVGDCATV----YSMIDRGRPMTGKVVGI 286

Query: 371 DPIISQQDN 379
              I+  D 
Sbjct: 287 GAGIADSDR 295


>gi|319409384|emb|CBI83028.1| putative secretion protein [Bartonella schoenbuchensis R1]
          Length = 397

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 99/322 (30%), Gaps = 51/322 (15%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +  + D+ E    S   +    +        +V    +S      +  L     
Sbjct: 31  QAYITAVVKRGDIEESVLASGIVRPYRLVAVGARATGRVIAMHVSPGSVVKEGDLLAEID 90

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 DL+ K ++L    +S  +    +  L +KN   Q ++ +   +   +       
Sbjct: 91  PTDQENDLKRKKAVLSHYYASLVEQEANL-TLAQKNLARQKEMVKAHAVSRANFDNALIQ 149

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +  ++  +  + E   +A ++                             E       I 
Sbjct: 150 VKIREAQIAQLREQIVQAQIDV-------------------------KSAEVNLSYTRIT 184

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVR 351
           +P +GT++              Q +  IV         ++A+++   I  V  G    + 
Sbjct: 185 APSSGTVLA-TVVEEGQNVNAVQSVPTIVILGDLSKMTVKAQISEADILKVHAGQA--LY 241

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--------------YYEVILKITDLA 397
           F  + D  ++++  I+E I+P      N++                  YY  ++ +    
Sbjct: 242 FTIFGDS-QRRYNGILETIEPAPESIRNDISIHPEMSGGSSALASSAIYYNGLVHVD--- 297

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             + +  LR    A+V      
Sbjct: 298 --NKDNFLRTYMTAQVHIILGR 317



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 52/138 (37%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV +SG +     +V + +  +G +    V  GS + +G  L   +  +  + +  K
Sbjct: 43  IEESVLASGIVRPY-RLVAVGARATGRVIAMHVSPGSVVKEGDLLAEIDPTDQENDLKRK 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  + +    +  +++ L          ++  ++      +F         K+    I+ 
Sbjct: 102 KAVLSHYYASLVEQEANLTLAQKNLARQKEMVKAHAVSRANFDNAL--IQVKIREAQIAQ 159

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +      ++S  +N
Sbjct: 160 LREQIVQAQIDVKSAEVN 177


>gi|188997648|ref|YP_001931899.1| efflux transporter, RND family, MFP subunit [Sulfurihydrogenibium
           sp. YO3AOP1]
 gi|188932715|gb|ACD67345.1| efflux transporter, RND family, MFP subunit [Sulfurihydrogenibium
           sp. YO3AOP1]
          Length = 388

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 49/150 (32%), Gaps = 12/150 (8%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +  ++N          I+K   V+ G  +  G  L   +D E     +     +  
Sbjct: 62  ADGMVSADNNAKVATKWMGQILK-IYVKEGDYVKAGQVLAILDDSEIKQQKNEALAGLDE 120

Query: 106 L-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           L +   +   +    L N        F  R  +    L + ++   +     +  +   +
Sbjct: 121 LSKAREEALAARKAALEN------YEFAKRTYERFKNLYQENAISKQ----QLEEIETKM 170

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
               + +  +      L+ K S ++A L+ 
Sbjct: 171 IAAKSMVDQVDAKLGQLKAKESQVKAKLAQ 200



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 73/237 (30%), Gaps = 44/237 (18%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           S + +     L  +  +   R +               ++     KNL+++NA+S+  L 
Sbjct: 105 SEIKQQKNEALAGLDELSKAREEALAARKAALENYEFAKRTYERFKNLYQENAISKQQLE 164

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E  +  +                              + + ++   L Q +   +   
Sbjct: 165 EIETKMIAAK-----------------------------SMVDQVDAKLGQLKAKESQVK 195

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +KL  +   +    I +P  G ++  +     +      P+  I    K     A +   
Sbjct: 196 AKLAQVNVMQGYTVIKAPFDGYVLK-KMNDEGDMVAPGMPIFII--GEKKLQFIANLDES 252

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
            +  VK+G    +      D+  K  K  + + +  I   +        ++V L I 
Sbjct: 253 LLDKVKEGDELDI------DLNGKVVKGKVIEKNSNIDPMNRT------FKVKLDIP 297


>gi|156740480|ref|YP_001430609.1| hypothetical protein Rcas_0460 [Roseiflexus castenholzii DSM 13941]
 gi|156231808|gb|ABU56591.1| conserved hypothetical protein [Roseiflexus castenholzii DSM 13941]
          Length = 513

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/411 (12%), Positives = 120/411 (29%), Gaps = 48/411 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV   G +          +   G++K   V   + I +G  L   +  E  D +   
Sbjct: 64  IERSVELQGRVAAVGERELSFAVD-GVVKAVYVTPNTNITRGQVLAELDSGELDDRLTQA 122

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL---DFLGKYHSTCSKVFNYG 156
           K      R  ++   + L F   + ++  +A  +   QLL   D      +  +      
Sbjct: 123 KQQYAQARRQLERALNELRFPLRRSEIDLEAARATLAQLLAPPDAAKVTAARAALQQAEA 182

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND- 215
                R+    +     + L +      ++      +S+  +     N  ++      D 
Sbjct: 183 ARDRARNDASAVKTRAELALQQAQKRLIAAQAEFSAASYAVEQDKTDNRAQERLARAGDA 242

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--------EISRDLE 267
           L   E  V +  +E     + +   ++        A       LK        E  R++ 
Sbjct: 243 LRAAEEDVARLQIEYDTARNNEIAAVQAAEAQVAIAQAALDELLKGPDPLRVAEARRNVA 302

Query: 268 QNQRTFADEMSKLTI-----------------LEKTREQKTILSPIAGTIVYNQSFSSSN 310
             +       S + +                 +++  E   +++   G I+     +  +
Sbjct: 303 LAELAVEQARSAIQVDPTLERAVEEAKKGVEDIQRQIESLKLVAGFDGQILAVNI-APGS 361

Query: 311 YAQQSQPL-MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
             +  +P+ + + P      +   +T      +  G   ++ F  Y        +  +  
Sbjct: 362 VTRAGEPVFIALDPSVAADALEVLITSSA-APLVVGQPVSITFARYPGATY---QGTVIS 417

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           I                Y        +A+   +++L +G  A V       
Sbjct: 418 I-----PGSGPGGALSGY-------HIAYEPTDLKLSSGDAATVTVVLARR 456


>gi|50119830|ref|YP_048997.1| macrolide-specific efflux protein maca [Pectobacterium atrosepticum
           SCRI1043]
 gi|49610356|emb|CAG73800.1| macrolide-specific efflux protein maca precursor [Pectobacterium
           atrosepticum SCRI1043]
          Length = 398

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 67/183 (36%), Gaps = 13/183 (7%)

Query: 10  KRNHPASLKRMTLLSIIGII---------GLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           +R    ++  +    +I +           L T + +  +E +V + G+I  +  V  + 
Sbjct: 8   RRRTTIAIGLIVTAVLIHLFFNKPSPAPNALTTAAEIADLEQTVLADGKIEAQKQV-SVG 66

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--- 117
           +  SG IK   V+ G ++ +G  +   +D+   D +   + ++KN++     + + L   
Sbjct: 67  AQASGQIKALHVKLGDKVQKGQLIAEIDDLTQQDTLKNGEAALKNVQAQRAAKLAELRNN 126

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +    +  +L K     +           +T + +       V   + +   ++   Y  
Sbjct: 127 ELSWQRQQMLMKRGVGVQADYDSAKATLDATRANIDALDAQIVQAQITVNTAKVNLGYTQ 186

Query: 178 RLD 180
              
Sbjct: 187 IRS 189



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 62/204 (30%), Gaps = 22/204 (10%)

Query: 166 MKLTRMRSIYLNRLDLENKSS---LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            ++  +    L    +E +       +A        + +   + +   +++ D   Q+  
Sbjct: 42  AEIADLEQTVLADGKIEAQKQVSVGAQASGQIKALHVKLGDKVQKGQLIAEIDDLTQQDT 101

Query: 223 VYKSTLELRENIHEQKNMLRHI--NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +      L+    ++   L  +  NEL  +           +  D +  + T     + +
Sbjct: 102 LKNGEAALKNVQAQRAAKLAELRNNELSWQRQQMLMKRGVGVQADYDSAKATLDATRANI 161

Query: 281 TILEKTREQ--------------KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPH 324
             L+    Q                I SP+ GT+V      +       Q    I  V +
Sbjct: 162 DALDAQIVQAQITVNTAKVNLGYTQIRSPMDGTVVAIPV-EAGQTVNAIQTTPTIAKVAN 220

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTA 348
                I+ K++   +  VK G   
Sbjct: 221 LDTMTIKVKISEADVVKVKTGMPV 244


>gi|320199661|gb|EFW74251.1| Putative membrane protein [Escherichia coli EC4100B]
          Length = 355

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/404 (12%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAHRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + N+ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETNDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|218532390|ref|YP_002423206.1| polysaccharide export protein [Methylobacterium chloromethanicum
           CM4]
 gi|218524693|gb|ACK85278.1| polysaccharide export protein [Methylobacterium chloromethanicum
           CM4]
          Length = 455

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/207 (9%), Positives = 63/207 (30%), Gaps = 12/207 (5%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
               E    ++L +++ +  +  ++ ++       +   +  +A                
Sbjct: 177 LTARERLRSLELARLAQRARQLRLEAQRDGRTSFVSDELIGPEA------------TALM 224

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               ++F+    +    + +   ++  +   R  L  + +L+   +   +  +     L 
Sbjct: 225 RGEQEIFSLQRETERSEVGLLRQQVERLETERTSLTQQRNLIEEQVKLTEAQVRNYARLT 284

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +     Q  +  ++R   +   EL     E         E+          + + +  DL
Sbjct: 285 DNGHGLQTIMVDRQRENARVRAELARIDAELARNGTATGEMTLRQRDTENGHRRRVVADL 344

Query: 267 EQNQRTFADEMSKLTILEKTREQKTIL 293
           +  ++   +  + L I     E +   
Sbjct: 345 QATRQQLLETEASLPIARDLLESRARR 371


>gi|332999175|gb|EGK18762.1| multidrug resistance protein mdtN [Shigella flexneri K-218]
          Length = 343

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G I+ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMTTVRAPFDGRIIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|163853531|ref|YP_001641574.1| polysaccharide export protein [Methylobacterium extorquens PA1]
 gi|163665136|gb|ABY32503.1| polysaccharide export protein [Methylobacterium extorquens PA1]
          Length = 455

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/207 (9%), Positives = 63/207 (30%), Gaps = 12/207 (5%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
               E    ++L +++ +  +  ++ ++       +   +  +A                
Sbjct: 177 LTARERLRSLELARLAQRARQLRLEAQRDGRTSFVSDELIGPEA------------TALM 224

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               ++F+    +    + +   ++  +   R  L  + +L+   +   +  +     L 
Sbjct: 225 RGEQEIFSLQRETERSEVGLLRQQVERLETERTSLTQQRNLIEEQVKLTEAQVRNYARLT 284

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +     Q  +  ++R   +   EL     E         E+          + + +  DL
Sbjct: 285 DNGHGLQTIMVDRQRENARVRAELARIDAELARNGTATGEMTLRQRDTENGHRRRVVADL 344

Query: 267 EQNQRTFADEMSKLTILEKTREQKTIL 293
           +  ++   +  + L I     E +   
Sbjct: 345 QATRQQLLETEASLPIARDLLESRARR 371


>gi|146305358|ref|YP_001185823.1| secretion protein HlyD family protein [Pseudomonas mendocina ymp]
 gi|145573559|gb|ABP83091.1| secretion protein HlyD family protein [Pseudomonas mendocina ymp]
          Length = 354

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 51/152 (33%), Gaps = 2/152 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I   +V+ G  +  G  L   +       +   +  ++      +T  S +    ++ 
Sbjct: 55  GRIASIEVDEGDFVEPGQILARMDTQALEAQLAQARAQLRQAENGQNTAASQIRLRESEK 114

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E     R+ +L     ++  + + V    ++   + L   L R++S          +
Sbjct: 115 LSAEAMVRQRQAELDAARKRHARSATLVQRNAMAQ--QQLDDDLARLQSAEAALAAARAQ 172

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            S   A +++ Q      ++  E    S   L
Sbjct: 173 VSSAEAGIAAAQSQAIEAQSATEAARASVERL 204


>gi|115358861|ref|YP_775999.1| multidrug resistance protein MdtN [Burkholderia ambifaria AMMD]
 gi|115284149|gb|ABI89665.1| secretion protein HlyD family protein [Burkholderia ambifaria AMMD]
          Length = 349

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/369 (11%), Positives = 104/369 (28%), Gaps = 81/369 (21%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P++  R+  L+I+ + G+   +       +  S+ +   + ++V + SP  G I +  
Sbjct: 7   TRPSTKGRVIALAIVAL-GIAALAYAYHRTSAYPSTDDASIDADLVHVASPVGGRIVRLA 65

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V    ++ +G  L   + +            +   +   D E +                
Sbjct: 66  VHENQRVAKGDLLYEIDPVPYR---------LTVAQAQADVELARA-------------- 102

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                                          SL  +   +   + N      +       
Sbjct: 103 -------------------------------SLDTRRRSLIGEHSNAAVAVEQVKRATQN 131

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                +D+  +  L  +  VS    +Q +     + + L +   +Q++  + I       
Sbjct: 132 YDLATRDVNRLAPLAAQGYVSAQQFDQAKVRQRDAAVSLAQAKEQQRSSAQTIG------ 185

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                        D      T     + L   +   +   + +P  G +      +    
Sbjct: 186 -------------DDADAIATLHAREAALARAQHALDDTVVRAPHDGLVTGLTVLA-GET 231

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKI 370
              +Q +  ++  S+   +        +  +  G  ATV    Y+ I R +     +  I
Sbjct: 232 LAPNQSIFTLIDASEWFAV-GNFRETSLNRIAVGDCATV----YSMIDRSRALTGKVIGI 286

Query: 371 DPIISQQDN 379
              I+  D 
Sbjct: 287 GAGIADSDR 295


>gi|67526897|ref|XP_661510.1| hypothetical protein AN3906.2 [Aspergillus nidulans FGSC A4]
 gi|40739647|gb|EAA58837.1| hypothetical protein AN3906.2 [Aspergillus nidulans FGSC A4]
 gi|259481523|tpe|CBF75123.1| TPA: M protein repeat protein (AFU_orthologue; AFUA_6G08660)
           [Aspergillus nidulans FGSC A4]
          Length = 1157

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 68/212 (32%), Gaps = 7/212 (3%)

Query: 90  IETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            E + L+   +  ++ LR  + + E    +        LE A ++   Q  + L      
Sbjct: 301 TEISQLVASHEEQLQALRAQLEEAEAKRKEIEEKSLKALEDASQAAASQGDEKLSAALDE 360

Query: 149 CSKVFNYGISSVYRSLKMKLTR----MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +     + ++   L  + +        I   +++L++KS  L A     + +      
Sbjct: 361 LKRSHQAQLEALESELAAQKSAAASYAEQIDSLKIELQSKSDSLEAAAKGFEAEKASALE 420

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
                  ++ +  +Q +       E   R++I   ++ +  +      A        +E 
Sbjct: 421 ELRGELQAEIESLKQSKDEAVRAAEESTRQSIAALEDKITSLQSQLTAAESATTQGQEET 480

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           +  L   +   ++    +       EQ    +
Sbjct: 481 AAQLAAKENEVSELRQAVDAARAELEQAGERA 512


>gi|332306693|ref|YP_004434544.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174022|gb|AEE23276.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 384

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 18/196 (9%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +       +    ++E +N  +   EL ++  +  + +        +          S+L
Sbjct: 102 QSAQAKYAQASSALNEAENEYQRYKELVEQGLVSKSGFDN-AEAAYKSALSNVEVAKSQL 160

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +  K R+  T+ +P  G I   +    S      Q + + V       +   V    IQ
Sbjct: 161 ELATKDRQDSTLQAPYDGVITK-RMIEPSQQISPGQSVFE-VEGHGGLEVHVSVPESLIQ 218

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
           H+  G    VRFP   ++   +   +I ++       +    T            L  + 
Sbjct: 219 HLSDGMIVPVRFPAAPNV---ELTGVITEVGTRAETANAFPIT------------LVLNG 263

Query: 401 NNIELRNGFPAEVLFT 416
           ++  LR G  AEV  T
Sbjct: 264 SSPLLRAGMTAEVDIT 279



 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 30/108 (27%), Gaps = 3/108 (2%)

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALD 118
              G +    V  G +I QG  L T +           +         +   + E     
Sbjct: 67  LVGGKVASVAVNLGQKITQGQVLATLDQRSFNLNFQSAQAKYAQASSALNEAENEYQRYK 126

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            L  +  V +  F++ E      L       S++          +L+ 
Sbjct: 127 ELVEQGLVSKSGFDNAEAAYKSALSNVEVAKSQLELATKDRQDSTLQA 174


>gi|220907459|ref|YP_002482770.1| RND family efflux transporter MFP subunit [Cyanothece sp. PCC 7425]
 gi|219864070|gb|ACL44409.1| efflux transporter, RND family, MFP subunit [Cyanothece sp. PCC
           7425]
          Length = 442

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/381 (12%), Positives = 109/381 (28%), Gaps = 96/381 (25%)

Query: 49  EILNEDNVVEIKSP-----FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +     V  I+        SG I    VE G ++ +G  L     +E            
Sbjct: 75  TLTLSGTVQPIQQAILSTRVSGRIIYLPVEAGDRVRKGQVLARINVMEMVAQ-------- 126

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                        S+ +  +       +          + + + 
Sbjct: 127 ----------------------------TSQAQAGVAQAQANLAQAQAGVAQAQAGLNQQ 158

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L  +L  + ++ L R++ +                   M +L ++ AVSQ  L+     +
Sbjct: 159 LAQRLDVLSALKLARIEQKR------------------MADLLKEGAVSQQQLDLANTAL 200

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            ++  +L +     +     IN+                   + Q+        S +T  
Sbjct: 201 EQAQAKLAQVDANIRQAQATINQS---------------QAAIAQSLAAVRQAESGVTAA 245

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQ----SQPLMKIVPHSKLTYIRAKVTPKQI 339
              +   TI++P  G +    ++               L+K+  +     +   V     
Sbjct: 246 SVNQSYGTIVAPFDGIVTAKLAY-EGETTNPFSMNGTELLKL-ENPHRLQLEITVPEANR 303

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           Q+V+ G +  V+        +  F+A+I +I P       +      + V + +   A  
Sbjct: 304 QYVQVGQSVRVQL----GTNQPPFQAVITQIIPAADPNSRS------FIVKIPLPPSA-- 351

Query: 400 DNNIELRNGFPAEVLFTAKNT 420
               E+ +G    +  +    
Sbjct: 352 ----EMMSGMFGRIELSTGTR 368


>gi|163782614|ref|ZP_02177611.1| acriflavin resistance protein AcrE [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882187|gb|EDP75694.1| acriflavin resistance protein AcrE [Hydrogenivirga sp. 128-5-R1-1]
          Length = 373

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 100/284 (35%), Gaps = 28/284 (9%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G ++   +  EI +   G +    V+ G  + +G  LL  +  +T   ++  +  +    
Sbjct: 62  GTVVPS-DRAEISTRTMGYVGYVGVKEGDHVRKGQLLLRIDPRDTKAQVEAARQRVVQAE 120

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            + +   +  +     Y+  +K  ES+     +F               + + YR+ K +
Sbjct: 121 KNYNAALAQYEATRKTYERFKKLLESKAVTPHEF-------------DMVEAKYRAAKAQ 167

Query: 168 LTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND--LNQQERIVY 224
           L   RS I L R +L+  SS L         +  ++  L +   +++    L   E+  Y
Sbjct: 168 LEAARSGIELARQNLKAVSSNLSYTEVRAPFEGYVVSKLVDVGDIAKPGYPLLVLEKPPY 227

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT------FADEMS 278
           K  + L E  + +      +    +    +    + E+   +    RT       +D   
Sbjct: 228 KVEVSLPERFYGKVKEGDVLRVYIESLKRKTTAKVVELEPSVNPANRTFKVKAVLSDRSI 287

Query: 279 K----LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           K      +  +   +K+IL P+   +     F+     +    L
Sbjct: 288 KSGFFARVYVEEPIRKSILVPVKA-VYKRWDFTGVWVVKPDNTL 330



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 63/194 (32%), Gaps = 17/194 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY---DEANLEFANYLKEISRDLE 267
            ++  + Q E+    +  +        +   + +        E ++  A Y       LE
Sbjct: 111 AARQRVVQAEKNYNAALAQYEATRKTYERFKKLLESKAVTPHEFDMVEAKYRA-AKAQLE 169

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +         L  +        + +P  G +V        + A+   PL+ +      
Sbjct: 170 AARSGIELARQNLKAVSSNLSYTEVRAPFEGYVVSKLVD-VGDIAKPGYPLLVL--EKPP 226

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +   +  +    VK+G    V    Y +  ++K  A + +++P ++  +        +
Sbjct: 227 YKVEVSLPERFYGKVKEGDVLRV----YIESLKRKTTAKVVELEPSVNPANRT------F 276

Query: 388 EVILKITDLAFSDN 401
           +V   ++D +    
Sbjct: 277 KVKAVLSDRSIKSG 290


>gi|152969380|ref|YP_001334489.1| hypothetical protein KPN_00823 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238893845|ref|YP_002918579.1| hypothetical protein KP1_1777 [Klebsiella pneumoniae NTUH-K2044]
 gi|262041121|ref|ZP_06014339.1| HlyD family secretion protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330009939|ref|ZP_08306660.1| auxiliary transport protein, membrane fusion protein family protein
           [Klebsiella sp. MS 92-3]
 gi|150954229|gb|ABR76259.1| hypothetical protein KPN_00823 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238546161|dbj|BAH62512.1| hypothetical protein KP1_1777 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259041571|gb|EEW42624.1| HlyD family secretion protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328534653|gb|EGF61223.1| auxiliary transport protein, membrane fusion protein family protein
           [Klebsiella sp. MS 92-3]
          Length = 331

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 70/202 (34%), Gaps = 16/202 (7%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADE 276
           Q++  +  S+     ++   ++           A  +   Y      +++ Q + +    
Sbjct: 131 QRQLGLRASSAISANDLENARSSRDQAQATLKSAQDKLRQYRAGNRPQEIAQAKASLEQA 190

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + L   +       + +P  GT++  ++            ++ +   +   ++RA V  
Sbjct: 191 QAALAQAKLDLHDTVLTAPSDGTLMT-RAVEPGTMLNAGGTVLTLS-LTHPVWVRAYVDE 248

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVIL 391
           K +   + G    +   +     +K +   I  + P       + +  +L+T   Y + +
Sbjct: 249 KNLGQAQPGQEVLL---YTDSRPDKPYHGKIGFVSPSAEFTPKTVETPDLRTDLVYRLRI 305

Query: 392 KITDLAFSDNNIELRNGFPAEV 413
            +TD      +  LR G P  +
Sbjct: 306 VVTDA-----DGALRQGMPVTI 322



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/134 (7%), Positives = 30/134 (22%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G  I  G  L   +     + +   + ++   +   D   +        
Sbjct: 51  GGRLASLTVDEGDSIRAGQTLGELDRAPYENALLQAQANVSTAQAQYDLMMAGYRAEEIA 110

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                               +             + +  +   +     ++   +  L  
Sbjct: 111 QAAAAVKQAQAAYDYAQNFYQRQLGLRASSAISANDLENARSSRDQAQATLKSAQDKLRQ 170

Query: 184 KSSLLRALLSSHQK 197
             +  R    +  K
Sbjct: 171 YRAGNRPQEIAQAK 184


>gi|85708276|ref|ZP_01039342.1| heavy metal RND efflux membrane fusion protein, CzcB family protein
           [Erythrobacter sp. NAP1]
 gi|85689810|gb|EAQ29813.1| heavy metal RND efflux membrane fusion protein, CzcB family protein
           [Erythrobacter sp. NAP1]
          Length = 496

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 76/247 (30%), Gaps = 37/247 (14%)

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+ + +D+ +++       V +     Q+ +V +    +   + +     R    + D  
Sbjct: 124 LAYNSRDVAIVQP-RAGGYVQRTYGLAQDDVVRRGAPIVDILVPDWGGAQREYIAVLDTG 182

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           +   A+ +++  R L       A  + +    + T    T+ +P+ G +      S    
Sbjct: 183 DQALADAMRQRMRLLGMTDAMIAS-VERTRRAQNTI---TVTAPVGGAVTMLGVRS-GMT 237

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
             + Q L +I       ++ A V   Q  +V++G   +     Y D R   F   I  I 
Sbjct: 238 VMEGQTLAEIT-GFTPIWLEASVPEVQAANVRQGQPISATLAAYPDQR---FAGRIVAIL 293

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF----------------PAEVLF 415
           P        +                  +    L+ G                 P+E + 
Sbjct: 294 PSADAASRTITV-----------RAELPNPRGRLKPGMFAQVSLSPDTRRALLVPSEAVI 342

Query: 416 TAKNTTL 422
                 L
Sbjct: 343 RTGRRNL 349


>gi|261329447|emb|CBH12428.1| hypothetical protein, conserved [Trypanosoma brucei gambiense DAL972]
          Length = 4210

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 65/204 (31%), Gaps = 4/204 (1%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D+E    +   +  +  LR   +  ++       + DV  +     EEQL +   +    
Sbjct: 848  DVELQGYVHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEEL 907

Query: 149  CS-KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +    G   +   +     ++  +     +L          +        M + L E
Sbjct: 908  HRVRETASGDVELQGYVHEMEEQLAELRAENEELHRVREAASGDVELQGYVHEMEEQLAE 967

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                ++N+   + R      +EL+  +HE +  L  +    +E      +  +E+     
Sbjct: 968  --LRAENEELHRVRETASGDVELQGYVHEMEEQLAELRAENEELRNTDGDKARELDVQ-N 1024

Query: 268  QNQRTFADEMSKLTILEKTREQKT 291
            +      +++++L    +      
Sbjct: 1025 EKLHEMEEQLAELRAENEELRNTD 1048



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 59/201 (29%), Gaps = 3/201 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     +  
Sbjct: 1024 NEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTD 1083

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +      L     ++  +     +L N        L    + L  M+    +  
Sbjct: 1084 GDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELR 1143

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +L   +    +      E +HE +  L  +    +E      +  +E+     +  
Sbjct: 1144 AENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQ-NEKL 1202

Query: 271  RTFADEMSKLTILEKTREQKT 291
                +++++L    +      
Sbjct: 1203 HEMEEQLAELRAENEELRNTD 1223



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 59/201 (29%), Gaps = 3/201 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     +  
Sbjct: 1199 NEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTD 1258

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +      L     ++  +     +L N        L    + L  M+    +  
Sbjct: 1259 GDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELR 1318

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +L   +    +      E +HE +  L  +    +E      +  +E+     +  
Sbjct: 1319 AENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQ-NEKL 1377

Query: 271  RTFADEMSKLTILEKTREQKT 291
                +++++L    +      
Sbjct: 1378 HEMEEQLAELRAENEELRNTD 1398



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 59/201 (29%), Gaps = 3/201 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     +  
Sbjct: 3003 NEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTD 3062

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +      L     ++  +     +L N        L    + L  M+    +  
Sbjct: 3063 GDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELR 3122

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +L   +    +      E +HE +  L  +    +E      +  +E+     +  
Sbjct: 3123 AENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQ-NEKL 3181

Query: 271  RTFADEMSKLTILEKTREQKT 291
                +++++L    +      
Sbjct: 3182 HEMEEQLAELRAENEELRNTD 3202



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 59/201 (29%), Gaps = 3/201 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     +  
Sbjct: 3178 NEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTD 3237

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +      L     ++  +     +L N        L    + L  M+    +  
Sbjct: 3238 GDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELR 3297

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +L   +    +      E +HE +  L  +    +E      +  +E+     +  
Sbjct: 3298 AENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQ-NEKL 3356

Query: 271  RTFADEMSKLTILEKTREQKT 291
                +++++L    +      
Sbjct: 3357 HEMEEQLAELRAENEELRNTD 3377



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 61/209 (29%), Gaps = 3/209 (1%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L   + +   L    +  I  LR   +  ++       + DV  +     EEQL +   +
Sbjct: 2960 LEVRNQQLLYLQKELEQKINELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAE 3019

Query: 145  YHSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                 +        +      L     ++  +     +L N        L    + L  M
Sbjct: 3020 NEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEM 3079

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            +    +      +L   +    +      E +HE +  L  +    +E      +  +E+
Sbjct: 3080 EEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKAREL 3139

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 +      +++++L    +      
Sbjct: 3140 DVQ-NEKLHEMEEQLAELRAENEELRNTD 3167



 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 72/230 (31%), Gaps = 39/230 (16%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
              + L   ++  K  LD L  + D   +   + E++L +   K H   S+  +       
Sbjct: 2756 ETQRLLLKLNEPKDGLDLLKEQIDEGRQQLNTLEQELCELGAKLHDVSSERNDLLRLQEE 2815

Query: 162  R--SLKMKLTRMRSIYLNRLDLENKSSLL-----------RALLSSHQKDLTMMKNLFEK 208
            +   L  +  R+ ++      L  ++  L           +      Q     M+ L E 
Sbjct: 2816 KTNELTAQQARLTAVEKQLNTLARENEELCKNNEIISVDAKKQSEYIQDIDRQMRTLSES 2875

Query: 209  NAVSQN----------DLNQQERIVYKSTLELRENIHE--------------QKNMLRHI 244
            ++  Q           +LN Q R + +   EL++   +              Q   ++ +
Sbjct: 2876 HSNLQQICNSKTNQIEELNSQLRQLQQDANELQKENEQLREHEVEKSLDLCVQSGRVQEL 2935

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             E   E   E     +E    L + +      +     LE+      + +
Sbjct: 2936 VEQLREVRTENTGIREEQHAKLRELEVRNQQLLYLQKELEQKIN--ELRA 2983



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 70/204 (34%), Gaps = 13/204 (6%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     ++ 
Sbjct: 3353 NEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAE-----NEE 3407

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL--LSSHQKDLTMMKNLFEKNA 210
                     R L ++  ++  +     +L  ++  LR    L S + D   +    +  A
Sbjct: 3408 LRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRRSNELFSLRNDYCDVSRDAKDGA 3467

Query: 211  V---SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS---R 264
            V   S ++   +E+          + I   KN L  +     +         KEI     
Sbjct: 3468 VKIYSGDEYLLKEKSADVDCSGDGDGIGVIKNELILVKRENIDLRSVDDENSKEIECLLS 3527

Query: 265  DLEQNQRTFADEMSKLTILEKTRE 288
            D+++ +   ++  S+   L K  +
Sbjct: 3528 DVKELRLKLSEISSENDELRKELD 3551


>gi|49083724|gb|AAT51124.1| PA3402 [synthetic construct]
          Length = 324

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 99/366 (27%), Gaps = 92/366 (25%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           ++             G ++   V  G ++ QG  L++ +  E              L   
Sbjct: 40  VIVSSKAK-------GRVQVLHVRRGDEVKQGDRLISLDSPE--------------LEAQ 78

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +D                                          +   +     L   L 
Sbjct: 79  LDA----------------------------------------LHAARNQAQAQLDESLH 98

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN--DLNQQERIVYKST 227
             R    +   L+   +   A L + + D    + + E+  +S+   DL+++ER V +  
Sbjct: 99  GTR--EESIRALKASLAQAEAELRNAESDFQRNQQMVERGFLSRTQFDLSRRERDVARDR 156

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           +        + N+   +    +E        ++     + + Q    D            
Sbjct: 157 VA-----EARANLDEGLKGDREERRQALQAAVRRADAQIAELQAQIDDL----------- 200

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGY 346
               + +P+ G +    +           PL+ +V      ++      + I   V+KG 
Sbjct: 201 ---QVRAPVNGEVGPIPA-EQGELINAYSPLLTLVRLDDSYFV--FNLREDILAKVRKGD 254

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNNIEL 405
              ++ P        + +  +  I P+              +++    T          L
Sbjct: 255 RIVMQVPGLGGA---EVETELRYIAPLGDFSTRRATRATGDFDLKTFETRFYPLQPTPGL 311

Query: 406 RNGFPA 411
           R G  A
Sbjct: 312 RPGMSA 317


>gi|209521565|ref|ZP_03270265.1| efflux transporter, RND family, MFP subunit [Burkholderia sp. H160]
 gi|209498004|gb|EDZ98159.1| efflux transporter, RND family, MFP subunit [Burkholderia sp. H160]
          Length = 383

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 95/271 (35%), Gaps = 38/271 (14%)

Query: 161 YRSLKMKLTRMRSIYLNR-LDLENKSSLL-RALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           Y+S + +L  + S+   R +D+  + + L R +     ++    + L   NA S   L Q
Sbjct: 57  YQSWQPQLAAVGSLRAVRGVDVTTEVAGLVRDVAFVSGQEAKAGQILVRLNADSDVALLQ 116

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                 ++  EL + ++E+      I  +                  L+ +      + +
Sbjct: 117 ----SLQAAAELAQTVYERDRAQYDIKAI--------------AKAQLDADAADLKGKKA 158

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           ++   +   ++KTI +P AG  +   + +   Y      ++ +       Y    V  +Q
Sbjct: 159 QVAQQQALVDKKTIRAPFAGR-LGITTINPGQYLNPGDAIVTLQAID-PIYADFSVPQQQ 216

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           +  +  G   +V    Y+      F   I+ + P +     N+Q            + + 
Sbjct: 217 LGQLAIGAIVSVDTNAYSGQT---FTGKIQSVSPKVDSTTRNVQI-----------EASV 262

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
            +   +L  G  A V   +     A+ +  P
Sbjct: 263 DNRERKLLPGMYANVKIDSGA--AARYLTLP 291


>gi|166712154|ref|ZP_02243361.1| cation efflux system protein [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 371

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 72/197 (36%), Gaps = 19/197 (9%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +L        K+   L++   E       +      A        ++     + + R  +
Sbjct: 116 ELATAYSDAGKARATLQQARLELARQ--KVLAADSIAAARDLQAAQQAFDSAQNDARAAS 173

Query: 275 DEMSKLTILEK--TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           D +++L +  +  +  +  + +PIAG +V   +     +   S PLM  V      ++ A
Sbjct: 174 DRLAQLGVAAQATSHRRYVLRAPIAGRVVDLSAALGGFWNDTSAPLMT-VADISQVWLTA 232

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  ++I  V +G   T     Y     + F   ++ +D ++      L      +V + 
Sbjct: 233 SVPEREIGQVFEGQQVTASLDAYP---GQHFTGQVQHLDDLLDPTTRTL------KVRV- 282

Query: 393 ITDLAFSDNNIELRNGF 409
               A ++++  L+ G 
Sbjct: 283 ----ALNNHDGLLKPGM 295



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 36/115 (31%), Gaps = 4/115 (3%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE-TTDLIDLKKVSIKNLRC 108
           +L E  V  +  P +G +       G  +  G  L   +  E  T   D  K      + 
Sbjct: 76  VLPERLVRVV-PPLAGRVVALPKTLGDTVRAGDVLCVLDSAELATAYSDAGKARATLQQA 134

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            ++  +     L        +  ++ ++          +   ++   G+++   S
Sbjct: 135 RLELARQ--KVLAADSIAAARDLQAAQQAFDSAQNDARAASDRLAQLGVAAQATS 187


>gi|16078499|ref|NP_389318.1| efflux permease [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309305|ref|ZP_03591152.1| hypothetical protein Bsubs1_07961 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313631|ref|ZP_03595436.1| hypothetical protein BsubsN3_07902 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318554|ref|ZP_03599848.1| hypothetical protein BsubsJ_07831 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322827|ref|ZP_03604121.1| hypothetical protein BsubsS_07947 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81637531|sp|O31710|YKNX_BACSU RecName: Full=Putative efflux system component yknX
 gi|2633806|emb|CAB13308.1| putative efflux permease [Bacillus subtilis subsp. subtilis str.
           168]
 gi|3282119|gb|AAC24909.1| YknX [Bacillus subtilis]
          Length = 377

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 67/159 (42%), Gaps = 6/159 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I  +V   G +   +          G ++  +V+ G ++ +GT L+T+ + + +   + 
Sbjct: 46  EISSTVMVPGTLKFSNEQYVFYEADKGTLEDIKVKEGDKVKKGTALVTYTNEQLSLEKEQ 105

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +++ ++ R  ID  +  L  L++K   LEK    +E +      K   +          
Sbjct: 106 NQLTSESNRLQIDQIQEKLKALDSKERELEKQVGKKEAE------KQIESERTELQMQKK 159

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +    LK    + +S+     DLE KS +   ++S +Q+
Sbjct: 160 TAEIELKQTELQRQSLANRVSDLEVKSEIEGTVISVNQE 198



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 16/174 (9%)

Query: 229 ELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           +++E +    +  R + +     EA  +  +   E+    +  +        +   L   
Sbjct: 119 QIQEKLKALDSKERELEKQVGKKEAEKQIESERTELQMQKKTAEIELKQTELQRQSLANR 178

Query: 287 REQKTILSPIAGTI--VYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVK 343
                + S I GT+  V  ++ S  +  Q  +P++ I  P      +  K++      VK
Sbjct: 179 VSDLEVKSEIEGTVISVNQEAASKKSDIQ--EPVIHIGNPKD--LVVSGKLSEYDTLKVK 234

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY----YEVILKI 393
           KG   T+       I+ K +K  +  +  +  QQ++           Y + +KI
Sbjct: 235 KGQKVTL---TSDVIQGKTWKGTVSAVGLVPDQQESAAAQGTEQAVQYPLQVKI 285


>gi|240140950|ref|YP_002965430.1| putative OMA family outer membrane saccharide export protein
           [Methylobacterium extorquens AM1]
 gi|240010927|gb|ACS42153.1| putative OMA family outer membrane saccharide export protein
           [Methylobacterium extorquens AM1]
          Length = 455

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/207 (9%), Positives = 63/207 (30%), Gaps = 12/207 (5%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
               E    ++L +++ +  +  ++ ++       +   +  +A                
Sbjct: 177 LTARERLRSLELARLAQRARQLRLEAQRDGRTSFVSDELIGPEA------------TALM 224

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               ++F+    +    + +   ++  +   R  L  + +L+   +   +  +     L 
Sbjct: 225 RGEQEIFSLQRETERSEVGLLRQQVERLETERTSLTQQRNLIEEQVKLTEAQVRNYARLT 284

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +     Q  +  ++R   +   EL     E         EL          + + +  DL
Sbjct: 285 DNGHGLQTIMVDRQRENARVRAELARIDAELARNGTATGELTLRQRDTENGHRRRVVADL 344

Query: 267 EQNQRTFADEMSKLTILEKTREQKTIL 293
           +  ++   +  + L I     E +   
Sbjct: 345 QATRQQLLETEASLPIARDLLESRARR 371


>gi|123443715|ref|YP_001007686.1| multidrug resistance protein MdtN [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090676|emb|CAL13552.1| putative HlyD family secretion protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 349

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 93/288 (32%), Gaps = 26/288 (9%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                L   +    S++       +V E +   R + L       +    +     +   
Sbjct: 42  SEDAELGASVVHIASSVPGRIISINVEENSKVRRGDLLFSIEPDLYRLQVEQAQAELKMA 101

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +   +   + +   N      +    +A L    + L  ++ L  K  V+   ++   
Sbjct: 102 EAARDTQQRTVVAEQSNAAITNEQIVRAQANLKLATQTLARLQPLLPKGYVTAQQVDDAA 161

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
              + + + L++ + +       ++                       ++       + L
Sbjct: 162 TAKHDAEVSLKQALKQSFAAEALVSST-------------------AASEALVVARRAAL 202

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            I E+      + +P  G +V     S+  +    Q +  ++ +++  +  A     +++
Sbjct: 203 AIAERELANTQVRAPHDGRVVGLTV-SAGEFVVPDQAIFTLI-NTEHWHASAFFRETELK 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD--NNLQTQEY 386
           H+K G  ATV        R++  +  +E I   +S +D  N  +   Y
Sbjct: 261 HIKVGDCATVYVMA---DRQRAIQGRVEGIGWGVSSEDMLNIPRGLPY 305


>gi|78061906|ref|YP_371814.1| multidrug resistance protein MdtN [Burkholderia sp. 383]
 gi|77969791|gb|ABB11170.1| Secretion protein, HlyD family [Burkholderia sp. 383]
          Length = 349

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 74/199 (37%), Gaps = 8/199 (4%)

Query: 14  PASLKRMTLLSIIGI-IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           P+   R+  L+I+ + I  + ++       +  S+ +   + +VV + SP  G I +  V
Sbjct: 9   PSVKGRVIALAIVALGIAALVYAYYR--TTAYPSTDDASIDADVVHVASPVGGRIVQLAV 66

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
               ++ +G  L   + +     +   +  ++  R  +DT + +L    +   V  +  +
Sbjct: 67  HENQRVTKGDLLYVIDPVPYRLTVAQAQADLELARASLDTRRRSLIGERSNAAVAAEQVK 126

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            R  Q  D   +  +  + +   G  S  +       R R   ++    + +    RA  
Sbjct: 127 -RATQNSDLATRDVNRLAPLAAQGYVS-AQQFDQAKVRQRDAAVSLTQAQEQQ---RASA 181

Query: 193 SSHQKDLTMMKNLFEKNAV 211
            +   +   +  L  + A 
Sbjct: 182 QTIGDEADAIATLHAREAA 200


>gi|313200206|ref|YP_004038864.1| RND family efflux transporter MFP subunit [Methylovorus sp. MP688]
 gi|312439522|gb|ADQ83628.1| efflux transporter, RND family, MFP subunit [Methylovorus sp.
           MP688]
          Length = 387

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 6/137 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IEI+VS+ G +     V ++ +  SG I++  V  GS + +G  L+  +      ++D  
Sbjct: 41  IEINVSALGTLQPRSYV-DVGAQVSGQIRRIHVAPGSHVEKGELLIEIDPSIQQAVVDSD 99

Query: 100 KVSIKNLRCHIDTEKSALDFLNNK---YDVLEKAFESREEQLLDFLGKYHSTCSKV--FN 154
           + ++  L+  +   ++  +    +      L K   +REE +   L  + +  ++V    
Sbjct: 100 RATLAALKAQLMESQAQSELAGQQHRRQQQLAKDDATREEDVQTALASWRAAEARVDNLR 159

Query: 155 YGISSVYRSLKMKLTRM 171
             I     +LK    ++
Sbjct: 160 AQIDGAQSTLKGHEAQL 176



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 70/209 (33%), Gaps = 13/209 (6%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + + +  ++  EL    H ++  L   +   +E         +     ++  +      
Sbjct: 106 LKAQLMESQAQSELAGQQHRRQQQLAKDDATREEDVQTALASWRAAEARVDNLRAQIDGA 165

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHSKLTYIRAKV 334
            S L   E       I +P+AGT+V  ++         +   P++  +       + A+V
Sbjct: 166 QSTLKGHEAQLGYTRIYAPMAGTVVSLEAR-EGQTLNATYQTPMILRIADLSSMTVWAEV 224

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   +  VK G      F       +++++  + ++ P         Q+ E       + 
Sbjct: 225 SEVDVTRVKPGMPVY--FTRLG-TEQRRWQGKVRQVLPAPPTPAGQGQSSETKPAASSVG 281

Query: 395 DL-------AFSDNNIELRNGFPAEVLFT 416
            +         ++ + +L     A+V F 
Sbjct: 282 KVVTYTVLFDVTNADGDLMPQMTAQVFFV 310


>gi|312882906|ref|ZP_07742638.1| hypothetical protein VIBC2010_20045 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309369425|gb|EFP96945.1| hypothetical protein VIBC2010_20045 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 376

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 56/144 (38%), Gaps = 10/144 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G I+   + V IKS  +GI+ +  V+ G ++ QG  L+      T   +   
Sbjct: 42  IEKKAVAVGSIVPA-HSVSIKSQNNGIVGEIYVKVGEKVKQGQALIKVSPNPTPKALTDA 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              +   +  +++ K  L+ L    D         E+ +     +Y S  S+V +     
Sbjct: 101 STDLMRSQAALESAKQKLNNLQRLLD---------EKIIPANFDEYVSARSEVKSAQADM 151

Query: 160 VYRSLKMKLTRMRSIYLNRLDLEN 183
           + +   ++L R     +    L +
Sbjct: 152 MQKRQNLELIRSGEATVGDAKLSS 175



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 79/219 (36%), Gaps = 23/219 (10%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL-EFANYLKEI---SRDLEQNQR 271
           L      + +S   L     +  N+ R ++E    AN  E+ +   E+     D+ Q ++
Sbjct: 97  LTDASTDLMRSQAALESAKQKLNNLQRLLDEKIIPANFDEYVSARSEVKSAQADMMQKRQ 156

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHS 325
                 S    +   +   TI +PI GT++  +              Q +  +M +    
Sbjct: 157 NLELIRSGEATVGDAKLSSTIYAPIDGTVLNLKV-EVGEPIISTESSQAATEMMSLA-DM 214

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           K    +  V+      +     A +    + D   K  + ++  +     +++N   T+ 
Sbjct: 215 KAMIFKGSVSEHDAAMLAPDMKAMITVAPFPD---KPIQGLLNTVAIQSQKRNNPTDTEA 271

Query: 386 Y-----YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 +EV +   D+    ++I LR+GF A    T K 
Sbjct: 272 KSFDNGFEVEVDNLDI---PSDIHLRSGFSANADITLKK 307


>gi|300698019|ref|YP_003748680.1| secretion protein HlyD [Ralstonia solanacearum CFBP2957]
 gi|299074743|emb|CBJ54301.1| putative secretion protein HlyD [Ralstonia solanacearum CFBP2957]
          Length = 452

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 85/276 (30%), Gaps = 35/276 (12%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               ++    I+S+     +   +             +    +  L+S Q+     + L+
Sbjct: 100 ELRRQLREAEIASIQAQQALNAAQQIESSTEYQAAARRLLAAQNSLASAQRRGREAQMLY 159

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           EK  +++ +L   ++ +     ++     E   +                  LK     L
Sbjct: 160 EKGIIARTELEAGKQEIDAGQSQVDGARDEIATL-----------------RLKRTPAAL 202

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV-----------YNQSFSSSNYAQQS 315
              +    +   +L  L    +  T+LSPI+G ++             +  ++       
Sbjct: 203 RVLELDLENRQLRLEELRAKLKATTMLSPISGVVLYPEPTDGNEPSGRKELNAGAAVTPK 262

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--- 372
             ++  V  +    I+  V  + I+ V  G    +      D     F   ++++     
Sbjct: 263 DVILT-VGDTSAFLIKTWVDEEDIRRVAPGQAVRIVLAADGDQ---AFAGTVQRVSSQAK 318

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
               +    +    +EV + +   A +     LR G
Sbjct: 319 AADGRGQGSRGTSEFEVQILLKPPADAGTGQSLRVG 354



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 51/155 (32%), Gaps = 12/155 (7%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS----------IKNLRC 108
           I +P  G++    V+ G  +  G  L    D E    +   +++           + +  
Sbjct: 68  IAAPVEGVLLAKFVQFGDTVTAGQKLAQVSDTELRRQLREAEIASIQAQQALNAAQQIES 127

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             + + +A   L  +  +       RE Q+L   G    T  +     I +    +    
Sbjct: 128 STEYQAAARRLLAAQNSLASAQRRGREAQMLYEKGIIARTELEAGKQEIDAGQSQVDGAR 187

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             + ++ L R        +L   L + Q  L  ++
Sbjct: 188 DEIATLRLKRTPAA--LRVLELDLENRQLRLEELR 220


>gi|78186736|ref|YP_374779.1| hypothetical protein Plut_0871 [Chlorobium luteolum DSM 273]
 gi|78166638|gb|ABB23736.1| hypothetical protein Plut_0871 [Chlorobium luteolum DSM 273]
          Length = 372

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 79/254 (31%), Gaps = 53/254 (20%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E KS  +R  +   +  +  ++ L+E+  V +  LN  ER +      L           
Sbjct: 124 EEKSEFIRQQIILQEDKVAKLRRLYEEGLVEKALLNATERDIMDLKNSLYA--------- 174

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                            L E  R LE+++             E  + +  +++P +G + 
Sbjct: 175 -------------LDESLAEAVRQLEKSR-------------EDYKWRSALMAPFSGIVT 208

Query: 302 YNQSFSSSNYAQQSQPLMKIVP----HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
              +  + +     Q +++I P      +   +   V     + V+ G  A +       
Sbjct: 209 EVLA-GNGDQVAAGQHILQIEPIGEGTEESLRLDLYVASGDAKKVRTGMLAYISPSTVKP 267

Query: 358 IREKKFKAIIEKID--PIISQQDNN-----------LQTQEYYEVILKITDLAFSDNNIE 404
            +       +  +   P+  +                +T   Y+V +++     + +   
Sbjct: 268 EQYGYIVGRVYSVSDYPVSVEAIATDIKNQQLAADFAKTSPPYKVKVQLLRDRSTPSGYR 327

Query: 405 LRNGFPAEVLFTAK 418
             +G  A    T+ 
Sbjct: 328 WTSGKGANTTITSG 341



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 79/242 (32%), Gaps = 8/242 (3%)

Query: 7   KNLKRNHPASLKRMTLLSI---IGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            +L R  P + +R  +      + I   + W IL  I  SV   G  +    +  I +  
Sbjct: 17  DDLDRLMPVTDRRGWIALAAVGVFIASAVAWGILGAISTSVDGKGITMATGAIRTITART 76

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G++  F ++ G  +  G  L   E  E   L  L+  S          EKS        
Sbjct: 77  GGVVSGFTLKGGEPVQIGQVLAIIEQPELKQLF-LEAFSKHEFLASHQEEKSEFIRQQII 135

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               + A   R  +         +   +      +S+Y   +     +R +  +R D + 
Sbjct: 136 LQEDKVAKLRRLYEEGLVEKALLNATERDIMDLKNSLYALDESLAEAVRQLEKSREDYKW 195

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +S+L+        + L    +           + Q E I   +   LR +++      + 
Sbjct: 196 RSALMAPFSGIVTEVLAGNGDQVAAG----QHILQIEPIGEGTEESLRLDLYVASGDAKK 251

Query: 244 IN 245
           + 
Sbjct: 252 VR 253


>gi|326801353|ref|YP_004319172.1| efflux transporter RND family, MFP subunit [Sphingobacterium sp.
           21]
 gi|326552117|gb|ADZ80502.1| efflux transporter, RND family, MFP subunit [Sphingobacterium sp.
           21]
          Length = 369

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 71/207 (34%), Gaps = 22/207 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +S  DLN     +     EL+  I +    L     LY +        L E   D+   Q
Sbjct: 106 ISSTDLNDMVAGLN--EAELKLKIAQ--RQLSATQNLYADGVASDKEIL-EAQADVSNAQ 160

Query: 271 RTFADEMSKLTILEKTREQ--KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
                  + L I     E+    I S   G IV     +        +PL  I       
Sbjct: 161 SEIKKTKASLDIFGGNIEKGVLVIRSKNDGYIVEKNIVNGQQIEAGGEPLFVIG-DLSRV 219

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           +++A V    I  V++G +  +    Y +   K F  +I +I  ++   +  L      +
Sbjct: 220 WVKANVYTGNISSVRRGQSVNIETTAYPN---KHFNGVINRISNVVDPNERVL------K 270

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLF 415
            I+++      + ++ LR    A +  
Sbjct: 271 AIIELD-----NQDLLLRPEMMATIDV 292



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 41/96 (42%), Gaps = 5/96 (5%)

Query: 47  SGEILNEDNVV-EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL---IDLKKVS 102
           +G +  +++ V +     SG+++      G  + +G  LL     +  D+   ++  ++ 
Sbjct: 65  TGSVSYDEDKVYKFVPLLSGVVQHVGFSLGDYVKKGQILLEISSTDLNDMVAGLNEAELK 124

Query: 103 IKNLRCHIDTEKSA-LDFLNNKYDVLEKAFESREEQ 137
           +K  +  +   ++   D + +  ++LE   +    Q
Sbjct: 125 LKIAQRQLSATQNLYADGVASDKEILEAQADVSNAQ 160


>gi|256838711|ref|ZP_05544221.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739630|gb|EEU52954.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 408

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 76/223 (34%), Gaps = 20/223 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDL 266
             +++ D    +  +  +  +L  +  E +   ++        E  L      +  + + 
Sbjct: 85  QLIAEMDKINLQAELRSAEAQLASSKTEFEYQQKNYARSKVLHEKQLISDTDYETATYNY 144

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ +  +    + +  + +  E  TI SPI G +V N++               L  I  
Sbjct: 145 EKARAAYDQSQASMVKVNRNLEYATITSPIDG-VVINRAVEEGQTVAAGFETPTLFTIAA 203

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------DPIISQQ 377
                 + A V    I +V++G   +     Y + +   F+ ++ +I          +  
Sbjct: 204 DLTKMQVIADVDEADIGNVEEGQRVSFTVDAYPNDQ---FEGVVRQIRLGDSESTSSASS 260

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +  T   YEV++        + +++L+    A +       
Sbjct: 261 STSSSTVVTYEVVITAD-----NPDLKLKPRLTANITIYTLER 298



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 67/186 (36%), Gaps = 4/186 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +V+++G +     V E+ +  SGII K   +    +  G  +   + I     +   
Sbjct: 44  ITNTVTATGTVEPVTEV-EVGTQVSGIIDKLYADYNDVVKAGQLIAEMDKINLQAELRSA 102

Query: 100 KVSIKNLRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  + + +   + ++   +    L+ K  + +  +E+           Y  + + +    
Sbjct: 103 EAQLASSKTEFEYQQKNYARSKVLHEKQLISDTDYETATYNYEKARAAYDQSQASMVKVN 162

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +  Y ++   +  +             +      L +   DLT M+ + + +     ++
Sbjct: 163 RNLEYATITSPIDGVVINRAVEEGQTVAAGFETPTLFTIAADLTKMQVIADVDEADIGNV 222

Query: 217 NQQERI 222
            + +R+
Sbjct: 223 EEGQRV 228


>gi|256420000|ref|YP_003120653.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
 gi|256034908|gb|ACU58452.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
          Length = 415

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 66/205 (32%), Gaps = 30/205 (14%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F    + +YR +       +++  NR  ++   + L   +   +      K L ++  VS
Sbjct: 113 FVNHETEIYRLINELQNTRQTLKQNRFTMQQTVANLDFQIEQAKDLYDRTKQLVDEKIVS 172

Query: 213 QNDL----NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           + +        ER+V +  +E+     ++ N    I+ L         N           
Sbjct: 173 RQEFIKNKLDYERLVKQRQIEVESQRFQEDNAKIQIDRLESTILRTQRN----------- 221

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KL 327
                      L +++       + +PI G +    +          Q + +I       
Sbjct: 222 -----------LQMMKDNLSNLVLRAPIDGQLSSVDA-EVGGSITAGQNIGQI--DDLDG 267

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRF 352
             +RA+V    I  V  G  +T  F
Sbjct: 268 FKMRAEVDEHYISRVFPGLKSTFEF 292



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 11/190 (5%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G + +  +E GS + +G  +L  E+          +  I  L   +   +  L      
Sbjct: 81  GGYVSQKYLEGGSMVKKGDSILRLENQNLMMDFVNHETEIYRLINELQNTRQTLKQNRFT 140

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV------YRSLKMKLTRMRSIYLN 177
                   + + EQ  D   +      +        +       R +K +   + S    
Sbjct: 141 MQQTVANLDFQIEQAKDLYDRTKQLVDEKIVSRQEFIKNKLDYERLVKQRQIEVESQRFQ 200

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             + + +   L + +   Q++L MMK+    N V +  ++ Q   +     E+  +I   
Sbjct: 201 EDNAKIQIDRLESTILRTQRNLQMMKDNL-SNLVLRAPIDGQ---LSSVDAEVGGSIT-A 255

Query: 238 KNMLRHINEL 247
              +  I++L
Sbjct: 256 GQNIGQIDDL 265


>gi|311747953|ref|ZP_07721738.1| cation efflux system protein/acriflavin resistance protein B family
           protein [Algoriphagus sp. PR1]
 gi|126574926|gb|EAZ79284.1| cation efflux system protein/acriflavin resistance protein B family
           protein [Algoriphagus sp. PR1]
          Length = 377

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 58/174 (33%), Gaps = 13/174 (7%)

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +  NI E +N L  +     E      N          + +         L       ++
Sbjct: 132 IERNIDELENSL-ELATTLFEKQERLWNQQIGTEVQYLEAKNRKEGLERNLASARTNLDK 190

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I +P +GTI   +        Q    + + +      +I A ++   I  + KG +  
Sbjct: 191 AIIRAPFSGTIETVEVR-LGELVQPGMGMFQFI-GESDLFIEADISESYIGVLSKGDSVD 248

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           V FP       K  +  +  +  II+  +        ++V + + +++    N+
Sbjct: 249 VNFPSIN----KDIQTKVSSVGAIINPNNRT------FKVEVLLPNMSMVKPNM 292



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 50/133 (37%), Gaps = 1/133 (0%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  V  +G +L++ NV  I +  SG I +  V  G ++ +GT L   +       ID  +
Sbjct: 82  DHYVEVTGSVLSKKNV-MISAETSGRILEVPVLEGMRVNKGTVLARIDAEIIERNIDELE 140

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            S++      + ++   +          +A   +E    +      +    +     S  
Sbjct: 141 NSLELATTLFEKQERLWNQQIGTEVQYLEAKNRKEGLERNLASARTNLDKAIIRAPFSGT 200

Query: 161 YRSLKMKLTRMRS 173
             +++++L  +  
Sbjct: 201 IETVEVRLGELVQ 213


>gi|118588114|ref|ZP_01545524.1| efflux transporter, RND family, MFP subunit [Stappia aggregata IAM
           12614]
 gi|118439736|gb|EAV46367.1| efflux transporter, RND family, MFP subunit [Stappia aggregata IAM
           12614]
          Length = 367

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 72/241 (29%), Gaps = 22/241 (9%)

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +     S+ F   +  +    +  +  +R     R + E K +     + S   D  + +
Sbjct: 44  RVSQATSEAFRVQVQRLVAQNRRAVLEVRG----RTEAEAKVA-----VRSKTTDDVVQR 94

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
              E   V+  D+                 I E K  L    EL  EA  +  +      
Sbjct: 95  PAQEGAHVAAGDVL-----CVLDKGSRESRILEAKAALAQ-AELDHEAATQLNSKGFTAQ 148

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             +   Q       ++L   E+  E   I SPIAG I  +         +Q      +V 
Sbjct: 149 TRVAALQAQLDAAKARLIEAEQELEHTVIRSPIAGVI-ESPMAEIGAQLEQGGICATVV- 206

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            S       +V+   I  +  G  A V       +  +     +  I P  +      + 
Sbjct: 207 DSDPMIAIGEVSELNIADISLGMPAKVTL-----VTGETLNGKVRYISPTANPDTKTFRI 261

Query: 384 Q 384
           +
Sbjct: 262 E 262


>gi|121594214|ref|YP_986110.1| RND family efflux transporter MFP subunit [Acidovorax sp. JS42]
 gi|120606294|gb|ABM42034.1| efflux transporter, RND family, MFP subunit [Acidovorax sp. JS42]
          Length = 538

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/345 (10%), Positives = 104/345 (30%), Gaps = 25/345 (7%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE-------SREEQ 137
            T     T    + +K++    +  + + +   +      +++ +          S+EE 
Sbjct: 138 ATVTATVTRPTDEKQKLTFAAEKDSLVSREIVAEPHAFDIEIIAQTATEPFMFVMSKEEG 197

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            ++         S   +  + +  ++  +    +R        +  + + +   +++   
Sbjct: 198 KIELTDAQIKAASISLDNAVKANIKTALLLPGEIRLNEDRTSHVVPRLAGVVESVNASLG 257

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +     +    A       + E    +  L L +  +E++  L       ++  L+   
Sbjct: 258 QVVKKGQVLAVIASPTASEQRSELQTAQKRLTLAKTTYEREKKLWEQKVSAEQDYLQAKQ 317

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L E    +    +  +      + +     +  + +P  G ++     S     ++   
Sbjct: 318 ALSEAEVAVANANQKLSAMGLSASSVA-GLNRIELRAPFDGIVIEKHL-SFGEAVKEDAA 375

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +  I       +    V  K +  V+ G   T++   +           +  +  +I +Q
Sbjct: 376 VFTIS-DLSQVWAEINVPAKDLPAVRVGEKVTIKATAFDASAT----GTVAFVGALIGEQ 430

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
               +      V+L     A+       R G    V   ++ T  
Sbjct: 431 TRTAKA----RVVLDNPKGAW-------RPGLFVNVEVVSEETVA 464



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 56/150 (37%), Gaps = 13/150 (8%)

Query: 35  SILLPIEISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           ++   I+ ++   GEI LNED    +    +G+++      G  + +G  L        +
Sbjct: 216 AVKANIKTALLLPGEIRLNEDRTSHVVPRLAGVVESVNASLGQVVKKGQVLAVIASPTAS 275

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +            R  + T +  L      Y+  +K +E +     D+L +     S+  
Sbjct: 276 EQ-----------RSELQTAQKRLTLAKTTYEREKKLWEQKVSAEQDYL-QAKQALSEAE 323

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               ++  +   M L+      LNR++L  
Sbjct: 324 VAVANANQKLSAMGLSASSVAGLNRIELRA 353


>gi|30064670|ref|NP_838841.1| multidrug resistance protein MdtN [Shigella flexneri 2a str. 2457T]
 gi|56480522|ref|NP_709857.2| multidrug resistance protein MdtN [Shigella flexneri 2a str. 301]
 gi|73621207|sp|Q83P86|MDTN_SHIFL RecName: Full=Multidrug resistance protein mdtN
 gi|30042929|gb|AAP18652.1| putative membrane protein [Shigella flexneri 2a str. 2457T]
 gi|56384073|gb|AAN45564.2| putative membrane protein [Shigella flexneri 2a str. 301]
 gi|281603453|gb|ADA76437.1| Multidrug resistance protein mdtN [Shigella flexneri 2002017]
 gi|313648738|gb|EFS13178.1| multidrug resistance protein mdtN [Shigella flexneri 2a str. 2457T]
 gi|332752177|gb|EGJ82569.1| multidrug resistance protein mdtN [Shigella flexneri K-671]
 gi|332753327|gb|EGJ83708.1| multidrug resistance protein mdtN [Shigella flexneri 2747-71]
 gi|332764769|gb|EGJ94998.1| membrane fusion protein of efflux pump [Shigella flexneri 2930-71]
 gi|333014254|gb|EGK33610.1| multidrug resistance protein mdtN [Shigella flexneri K-304]
          Length = 343

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G I+ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMTTVRAPFDGRIIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|333011103|gb|EGK30517.1| multidrug resistance protein mdtN [Shigella flexneri K-272]
 gi|333012705|gb|EGK32085.1| multidrug resistance protein mdtN [Shigella flexneri K-227]
          Length = 343

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 89/259 (34%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++     + +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQVTDTLRRTEPLLKEGFVSAEDVDRARTAQHAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G I+ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMTTVRAPFDGRIIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 62/187 (33%), Gaps = 6/187 (3%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            I +  V +   + QG  L   +       +   + S+  L   I   + ++D      D
Sbjct: 58  RIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGAD 117

Query: 126 VLEKAFE---SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            +    E   +  +Q+ D L +      + F      V R+   +      +    L  +
Sbjct: 118 SVNATVEKARAAAKQVTDTLRRTEPLLKEGFVSA-EDVDRARTAQHAAEADLNAVLLQAQ 176

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           + +S +  + +   +   +  ++         ++           + L+ ++ +  + +R
Sbjct: 177 SAASAVSGVDALVAQRAAVEADIALTKL--HLEMTTVRAPFDGRIISLKTSVGQFASAMR 234

Query: 243 HINELYD 249
            I  L D
Sbjct: 235 PIFTLID 241


>gi|312887790|ref|ZP_07747378.1| hypothetical protein MucpaDRAFT_5395 [Mucilaginibacter paludis DSM
           18603]
 gi|311299776|gb|EFQ76857.1| hypothetical protein MucpaDRAFT_5395 [Mucilaginibacter paludis DSM
           18603]
          Length = 323

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 58/155 (37%), Gaps = 15/155 (9%)

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
            +  T+ SP  G + +N + + S Y      + +  +VP +   Y+   +    +  V  
Sbjct: 178 LKNYTLQSPTDGKLTWNLA-TVSPYVNLAPKKIIGYVVPKTD-FYLEVPLNEDDLGKVHV 235

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL---AFSDN 401
           G +  +R   +   +       I  +  II        T  ++ V + +  +     + +
Sbjct: 236 GQSVQLRTDAFFYQKYGVINGRISNVSDII--------TNGHFTVFVSLPQVINTPITGD 287

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
              L+NG    V    ++ +L   + + I  N+ +
Sbjct: 288 RPILKNGLNCRVYIVIRDQSLFTALFNSIFSNYNR 322


>gi|253687170|ref|YP_003016360.1| efflux transporter, RND family, MFP subunit [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251753748|gb|ACT11824.1| efflux transporter, RND family, MFP subunit [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 399

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 57/149 (38%), Gaps = 4/149 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  +E +V + G+I  +  V  + +  SG IK   VE G ++ +G  +   +D+   D
Sbjct: 42  AEIADLEQTVLADGKIEAQKQV-SVGAQASGQIKALHVELGDKVTKGQLIAEIDDLTQQD 100

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +   + ++KN++     + + L   +    +  +L K     +           +T + 
Sbjct: 101 TLRNGEAALKNIQAQRTAKLAELRNNELSWQRQQMLMKRGVGAQADYDSAKATLDATRAN 160

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +       V   + +   ++   Y     
Sbjct: 161 IDALDAQIVQAQITVNTAKVNLGYTQIRS 189



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 59/204 (28%), Gaps = 22/204 (10%)

Query: 166 MKLTRMRSIYLNRLDLENKSS---LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            ++  +    L    +E +       +A        + +   + +   +++ D   Q+  
Sbjct: 42  AEIADLEQTVLADGKIEAQKQVSVGAQASGQIKALHVELGDKVTKGQLIAEIDDLTQQDT 101

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD---------LEQNQRTF 273
           +      L+    ++   L  +         +     + +            L+  +   
Sbjct: 102 LRNGEAALKNIQAQRTAKLAELRNNELSWQRQQMLMKRGVGAQADYDSAKATLDATRANI 161

Query: 274 ADEMSKLTILEKTRE-------QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPH 324
               +++   + T            I SP+ GT+V      +       Q    I  V +
Sbjct: 162 DALDAQIVQAQITVNTAKVNLGYTQIRSPMDGTVVAIPV-EAGQTVNAIQTTPTIAKVAN 220

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTA 348
                I+ K++   +  VK G   
Sbjct: 221 LDTMTIKVKISEADVVKVKTGMPV 244


>gi|254505717|ref|ZP_05117863.1| multidrug resistance efflux pump [Vibrio parahaemolyticus 16]
 gi|219551370|gb|EED28349.1| multidrug resistance efflux pump [Vibrio parahaemolyticus 16]
          Length = 407

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 54/379 (14%), Positives = 128/379 (33%), Gaps = 85/379 (22%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS----GIIKKF 70
           A L   + L  + +  +       P++    S G ++   ++     P S    G +++ 
Sbjct: 30  AYLGGASWLLFVWVGLI----NFTPMD---LSGGSVVQSPHIQL--RPDSANVTGKVEEI 80

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            ++    + +G  +   +D +     +  KVS                            
Sbjct: 81  FIKPNQSVKKGQAIYRLDDTQYQIAYNQAKVS---------------------------- 112

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                E+      +       +     +S+ + L    T  R + + ++D E +  +L+ 
Sbjct: 113 -----EEATSVAKEVAQEDVAIAKATYTSMQQDLT---TTERQLEMAKVDYELQQKMLKR 164

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
               ++           +N ++ +D+++QE +V K+ L    NI   ++ L+      D+
Sbjct: 165 YKEQNR---------VVENTITASDIDKQETLVAKAKL----NIETIESQLQTKQVETDK 211

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           A L  +     +          +     +L   +   +   + +P  G +          
Sbjct: 212 AKLAISKATLAVKAKHAD----WLKAQEQLAKAKWDLDSTLVRAPADGFVTN-------F 260

Query: 311 YAQQSQPLMKIVPH----SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK--FK 364
             ++ Q +  ++P     ++  Y+  +V  + I++VK G  A      +A        F 
Sbjct: 261 ILREGQRV-SMMPRLQMYTEEKYVLMRVNHQAIRNVKPGQVAE-----FASSVYPGKIFS 314

Query: 365 AIIEKIDPIISQQDNNLQT 383
           A +E I     +  +NL  
Sbjct: 315 AEVEGIVEGTGEAQSNLLG 333


>gi|189459820|ref|ZP_03008605.1| hypothetical protein BACCOP_00450 [Bacteroides coprocola DSM 17136]
 gi|189433430|gb|EDV02415.1| hypothetical protein BACCOP_00450 [Bacteroides coprocola DSM 17136]
          Length = 416

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/356 (13%), Positives = 108/356 (30%), Gaps = 93/356 (26%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEIS---------------VSSSGEILNE 53
            KR+ P       ++ ++  I     +  L ++ +               +  +G++   
Sbjct: 12  QKRHIPYIAGGAVVILLLIWIIFGNHASTLRVDAASLNIADVTFGKFNDYIRLNGQVQPI 71

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             V  +     GI+++  VE G+ + +G  +L   +                        
Sbjct: 72  SVVQ-LSPEEGGIVQEKVVEEGAHVKKGDVILRLSNSNLD-------------------- 110

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              L  LN + ++ EK    R  Q+     K ++   KV                     
Sbjct: 111 ---LQILNAESELAEKQNLLRNTQVTMQQDKLNNETEKV--------------------- 146

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               +LD++ +           Q+     + L+++  +S+ +  Q            +E+
Sbjct: 147 ----QLDIDTRR---------KQRTYLQYERLYKERLISREEYLQA-----------KED 182

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +     I E   + ++     + ++  +L+  ++       +   LE       + 
Sbjct: 183 YEVAQKKHGLITERLVQDSIYRNIQMDQMEDNLQNMRKNVLLIRERKDKLE-------VR 235

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           + I G  +              Q + +I   S    I A +    I  V  G  AT
Sbjct: 236 ATIDGE-LGLLDAELGQNITAGQMVGQINDLSD-FKIEAMIDEHYIDRVTNGLPAT 289


>gi|86160521|ref|YP_467306.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85777032|gb|ABC83869.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 527

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 73/205 (35%), Gaps = 16/205 (7%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + + E +    + EL     E    LR    L           L + +R   +     A 
Sbjct: 229 VRRGEPLFTMYSPELLAAQEEYLLALRTSRSLAQGGAEGPGATLVKAARRKLELWDVPAS 288

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
           E+++L    + R+  T  +P +G +   +        +      +IV      ++ A V 
Sbjct: 289 EIARLEKTGEARKDLTFHAPASGVVTKREIV-PGMRIEAGSMPFEIV-DLSRVWVLADVY 346

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
             +++HVK G  AT+    Y +     FK  +  IDP++  +           V ++I  
Sbjct: 347 ESELRHVKVGLPATLSLKAYPNR---AFKGKVVFIDPLLDPKTRT--------VKVRI-- 393

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNT 420
             F +   EL+     EVL      
Sbjct: 394 -EFDNAGGELKPEMFGEVLLQGARR 417


>gi|332879571|ref|ZP_08447266.1| efflux transporter, RND family, MFP subunit [Capnocytophaga sp.
           oral taxon 329 str. F0087]
 gi|332682537|gb|EGJ55439.1| efflux transporter, RND family, MFP subunit [Capnocytophaga sp.
           oral taxon 329 str. F0087]
          Length = 416

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 110/359 (30%), Gaps = 94/359 (26%)

Query: 7   KNLKRNHPASLKRMTLL-SIIGIIGLITWSILLPIE----ISVSSS-----------GEI 50
           K +KR H   +    LL +++G I    +  +L ++       ++            G+ 
Sbjct: 9   KRIKRKHLPWIAGGILLSALVGWIVFGKYHSVLKVDRRILNIATAEKTNFDDYIRIRGQA 68

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
                V  +     GI+ +   E GS++  G  LL      T   +DL+           
Sbjct: 69  SPISTVQ-VAPEEGGIVTEKVAEEGSRVKAGDVLLRL----TNANLDLQ----------- 112

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                    LN + ++ EK    R  Q+     K ++   K+         R   ++ +R
Sbjct: 113 --------ILNAEAELAEKQNLLRNTQVTMQQDKLNNEMEKLQLSQNKERKRRTFLQYSR 164

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
                                             L++   VS+ +  Q            
Sbjct: 165 ----------------------------------LYKDELVSREEFLQ-----------C 179

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +E+    +     I E   + ++  +  ++++  +LE  QR  +   ++ + L+      
Sbjct: 180 KEDCELAEKQYSLICERLLQDSIYRSIQMQQMEENLENMQRNLSLIRARKSKLD------ 233

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            + + I G  +              + + + V       I A +    I  V  G   T
Sbjct: 234 -VRAGIDGE-LGLLEVELGENISAGRKVGQ-VNDLSDFKIEAYIDELYIDRVHAGLAGT 289


>gi|298374293|ref|ZP_06984251.1| periplasmic component of efflux system [Bacteroides sp. 3_1_19]
 gi|298268661|gb|EFI10316.1| periplasmic component of efflux system [Bacteroides sp. 3_1_19]
          Length = 408

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 76/223 (34%), Gaps = 20/223 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDL 266
             +++ D    +  +  +  +L  +  E +   ++        E  L      +  + + 
Sbjct: 85  QLIAEMDKINLQAELRSAEAQLASSKTEFEYQQKNYARSKVLHEKQLISDTDYETATYNY 144

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ +  +    + +  + +  E  TI SPI G +V N++               L  I  
Sbjct: 145 EKARAAYDQSQASMVKVNRNLEYATITSPIDG-VVINRAVEEGQTVAAGFETPTLFTIAA 203

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------DPIISQQ 377
                 + A V    I +V++G   +     Y + +   F+ ++ +I          +  
Sbjct: 204 DLTKMQVIADVDEADIGNVEEGQRVSFTVDAYPNDQ---FEGVVRQIRLGDSESTSSASS 260

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +  T   YEV++        + +++L+    A +       
Sbjct: 261 STSSSTVVTYEVVITAD-----NPDLKLKPRLTANITIYTLER 298



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 67/186 (36%), Gaps = 4/186 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +V+++G +     V E+ +  SGII K   +    +  G  +   + I     +   
Sbjct: 44  ITNTVTATGTVEPVTEV-EVGTQVSGIIDKLYADYNDVVKAGQLIAEMDKINLQAELRSA 102

Query: 100 KVSIKNLRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  + + +   + ++   +    L+ K  + +  +E+           Y  + + +    
Sbjct: 103 EAQLASSKTEFEYQQKNYARSKVLHEKQLISDTDYETATYNYEKARAAYDQSQASMVKVN 162

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +  Y ++   +  +             +      L +   DLT M+ + + +     ++
Sbjct: 163 RNLEYATITSPIDGVVINRAVEEGQTVAAGFETPTLFTIAADLTKMQVIADVDEADIGNV 222

Query: 217 NQQERI 222
            + +R+
Sbjct: 223 EEGQRV 228


>gi|262274369|ref|ZP_06052180.1| multidrug resistance efflux pump [Grimontia hollisae CIP 101886]
 gi|262220932|gb|EEY72246.1| multidrug resistance efflux pump [Grimontia hollisae CIP 101886]
          Length = 368

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 67/221 (30%), Gaps = 24/221 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + F   + +    L+       +        +      R  L++ +K++   + L EK 
Sbjct: 90  PRPFELAVKAARFDLQQAAQSYEADSAAISVAQANEIAARVKLNNAKKNVERNRVLAEKG 149

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +SQ  ++     +  +   L +     +   +       E                   
Sbjct: 150 TISQAAMDNILTELETAQAGLAQASSALEKAKQEFGPRGIEN------------------ 191

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                  +++            + +P  G +      +  +YA   QPL+  + ++   +
Sbjct: 192 -PEIQSVLNRQEQALLNLNHTKLTAPADGVVTNMNV-AVGDYAAAGQPLLTFI-NTNNLW 248

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           + A V    + H+K      + F  Y     + F+  I  I
Sbjct: 249 LTAMVRENSLAHLKPSNRVKIVFDAYP---GQVFEGKISSI 286



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/180 (8%), Positives = 49/180 (27%), Gaps = 2/180 (1%)

Query: 25  IIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           +I +     W   L  +     + +      ++ I    SG I +  + + S +  G  L
Sbjct: 26  VIFVAVAALWLYTLWADRMTPMTDQARVNGQLIRISPEVSGPISQVSITDNSNVKAGDEL 85

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +T +       +   +  ++        E  +      + + +    +    +      +
Sbjct: 86  VTLDPRPFELAVKAARFDLQQ--AAQSYEADSAAISVAQANEIAARVKLNNAKKNVERNR 143

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +    +    + ++   L+     +          + +           Q  L   + 
Sbjct: 144 VLAEKGTISQAAMDNILTELETAQAGLAQASSALEKAKQEFGPRGIENPEIQSVLNRQEQ 203


>gi|218440494|ref|YP_002378823.1| hypothetical protein PCC7424_3565 [Cyanothece sp. PCC 7424]
 gi|218173222|gb|ACK71955.1| protein of unknown function DUF323 [Cyanothece sp. PCC 7424]
          Length = 925

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/244 (10%), Positives = 69/244 (28%), Gaps = 24/244 (9%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            E     + I  ++ +    +  ++ ++        +     +    R E+      +  
Sbjct: 384 LEKQHQEEEIQKQRQAEAKRQAKLERQRRE-----EEAQRQAELDRQRREEEAQRQAELD 438

Query: 147 STCSKVFNYGISSVYRSLKMK-LTRMRSIYLNR-----LDLENKSSLLRALLSSHQKDLT 200
               +      + + R  + + + + R     R          + +  +A L   +++  
Sbjct: 439 RQRREEEAQRQAELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEE 498

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM------LRHINELYDEANLE 254
             +         + ++ +Q +   K   +L     E++         +   E   +    
Sbjct: 499 AQRQAELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEIQKQRQA 558

Query: 255 FANYLKEISRDLE--QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            A    ++ R     + Q+ F  E  + T    T  ++ IL      I            
Sbjct: 559 EAKRQAKLERQRREEEAQKRFNSERQQTTSQSSTISRRGIL-----KIAGLTVIGGGGAI 613

Query: 313 QQSQ 316
              Q
Sbjct: 614 TLGQ 617



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 71/210 (33%), Gaps = 10/210 (4%)

Query: 89  DIETTDLIDLKKVSIKNLRCH----IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           D  T +L+   +  +  LR      I+TE  A   +  + +V  +     E+Q  +   +
Sbjct: 318 DESTQNLLQEYRQDVLGLRDEDIESIETEILAPIKVRLEEEVQRQKQAELEKQRREEEQQ 377

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL---RALLSSHQKDLTM 201
                     +    + +  + +  R   +   R + E +       +      Q+   +
Sbjct: 378 RQKQVELEKQHQEEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREEEAQRQAEL 437

Query: 202 MKNLFEKNAVSQNDLNQQERIVY---KSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            +   E+ A  Q +L++Q R      +   E +     ++       +   E + +    
Sbjct: 438 DRQRREEEAQRQAELDRQRREEEIQKQRQAEAKRQAKLERQRREEEAQRQAELDRQRREE 497

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             +   +L++ +R    +  +    ++  +
Sbjct: 498 EAQRQAELDRQRREEEIQKQRQAEAKRQAK 527


>gi|84393809|ref|ZP_00992555.1| Membrane-fusion protein [Vibrio splendidus 12B01]
 gi|84375549|gb|EAP92450.1| Membrane-fusion protein [Vibrio splendidus 12B01]
          Length = 374

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 66/207 (31%), Gaps = 21/207 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             + Q    + K  LE++    E+ + L  + +   +A         +        + + 
Sbjct: 102 VKVGQAIAQIDKGDLEIQ---LERASALYRLKQKEFKAAQSLKKRGLQGEIAYTTAEASL 158

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +  +     E   +   I SP +G +         ++     P+  ++       I A 
Sbjct: 159 TEAKAMKRNAELALKNTVITSPFSGVVQDLMV-ELGDFVGVGDPVAGVI-DLDPLVIEAD 216

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V+ + IQH+    +A VR         ++ +  +  +  I S   N              
Sbjct: 217 VSERHIQHLLVNQSALVRLLG-----REEAEGRLRYVSRISSAATNTF-----------P 260

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
            ++   ++   L  G  AEV    +  
Sbjct: 261 IEIEIDNSKGLLPAGVSAEVTLNLETR 287


>gi|302339782|ref|YP_003804988.1| efflux transporter RND family, MFP subunit [Spirochaeta smaragdinae
           DSM 11293]
 gi|301636967|gb|ADK82394.1| efflux transporter, RND family, MFP subunit [Spirochaeta
           smaragdinae DSM 11293]
          Length = 426

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 70/216 (32%), Gaps = 30/216 (13%)

Query: 222 IVYKSTLELRENIHEQKNMLRHIN------ELYDEANLEFANYLKEISRDLEQNQRTFAD 275
            +    LE++E   E   +           E  + A L   N L +   DL+ ++     
Sbjct: 93  DLNTEILEIQEKEAEASVLEAQATYDHTLLEYNNNAGLHAKNMLSDF--DLDTSKMELHI 150

Query: 276 EMSKLTILEKTREQKTI--------LSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHS 325
             ++L   E   +Q  I        LSPI+G ++               +  L  +    
Sbjct: 151 AKAQLMSAEAQLKQINIELEQYALILSPISGIVLERDVEVGDTVVSGTSATTLFSLAKDL 210

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               I   V    I  + KG         YA      F   + +I  ++   ++N+ T  
Sbjct: 211 SQMEIHVDVDELDISEITKGQEVRFTVDAYAGDT---FSGSVRQI-RLVPTTEDNVVT-- 264

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            Y VI+   +        +L  G  A V F  +  +
Sbjct: 265 -YTVIVDADNQE-----NKLLPGMTATVDFLVEQKS 294


>gi|21242881|ref|NP_642463.1| cation efflux system protein [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21108374|gb|AAM36999.1| cation efflux system protein [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 416

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 74/211 (35%), Gaps = 29/211 (13%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS--RDLEQNQ----------RTFA 274
           + EL     +       + +   E   + A     IS  RDL+  Q          R  +
Sbjct: 159 SAELASAYSDAGKARATLEQARLELARQKALAADSISAARDLQAAQQAFDSAQNDARAAS 218

Query: 275 DEMSKLTILEKTR--EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           D +++L +  +     +  + +PIAG +V   +     +   S  LM  V      ++ A
Sbjct: 219 DRLAQLGVAAQASSHRRYVVRAPIAGRLVDLSAALGGFWNDTSASLMT-VADISQVWLTA 277

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  ++I  V +G   T     Y   R   F   ++ +D ++      L      +V + 
Sbjct: 278 SVPEREIGQVFEGQPVTASLEAYPAQR---FVGQVQHLDDLLDPATRTL------KVRV- 327

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
               A  + +  L+ G  A   F ++     
Sbjct: 328 ----ALENRDGLLKPGMFARAQFHSRPRQAL 354



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 42/144 (29%), Gaps = 10/144 (6%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
           E+L E  V  +  P +G +       G  +  G  L   +  E               + 
Sbjct: 120 EVLPERLVRVV-PPLAGRVVALPKTLGDTVRAGDVLCVLDSAELASAYS------DAGKA 172

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
               E++ L+    K    +    +R+ Q            ++  +  ++ +        
Sbjct: 173 RATLEQARLELARQKALAADSISAARDLQAAQQAFDSAQNDARAASDRLAQLG---VAAQ 229

Query: 169 TRMRSIYLNRLDLENKSSLLRALL 192
                 Y+ R  +  +   L A L
Sbjct: 230 ASSHRRYVVRAPIAGRLVDLSAAL 253


>gi|77361730|ref|YP_341305.1| substate-binding protein involved in drug resistance
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76876641|emb|CAI87863.1| putative substate-binding protein involved in drug resistance
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 387

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 61/164 (37%), Gaps = 5/164 (3%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  I  S+ +SG ++    V  ++S  +G + K  VE G  + QG  L+  +       +
Sbjct: 39  LGNIADSIMASGNLVFNTQVQ-LRSEVTGRVDKVFVEEGQSVKQGDILMRLDTTAFESEV 97

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              K  ++     I+ + S +  +N +  +  +          +   +  ++   +    
Sbjct: 98  TRNKALLRA--TEIEIKHSQIRLVNFERQLKRQKELYDVGLGNEEAYENLASARDLAKID 155

Query: 157 ISSVYRSLKMKLT--RMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           I S   S        ++    LN+   +   S L A ++  + +
Sbjct: 156 IESRKESFNQAHASLQIAQDRLNKSVFKAPMSGLLASVNIKEGE 199



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 66/219 (30%), Gaps = 25/219 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD---------EANLEFANYLKEIS 263
           ++++ + + ++  + +E++ +     N  R +    +         EA    A+      
Sbjct: 94  ESEVTRNKALLRATEIEIKHSQIRLVNFERQLKRQKELYDVGLGNEEAYENLASARDLAK 153

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-----SQPL 318
            D+E  + +F    + L I +    +    +P++G +                      L
Sbjct: 154 IDIESRKESFNQAHASLQIAQDRLNKSVFKAPMSGLLASVNIKEGETVIAGTTNIIGSDL 213

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M +V          +V    I  +K    A +    Y +     F   +  I      Q 
Sbjct: 214 M-LVADPSAILAELRVDETDIASIKLHQKANIYAAAYPNN---PFTGTVINIGTSAKNQP 269

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +       +V+L  TD        +L  G         
Sbjct: 270 GSQGLSFKVKVLLDATDR-------QLYAGMSCRAEIAT 301


>gi|145219667|ref|YP_001130376.1| putative ABC transport system, lipoprotein [Prosthecochloris
           vibrioformis DSM 265]
 gi|145205831|gb|ABP36874.1| putative ABC transport system, lipoprotein [Chlorobium
           phaeovibrioides DSM 265]
          Length = 303

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 86/256 (33%), Gaps = 32/256 (12%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           + ++ SL+  L + + +   +  L  ++S+ R   S+ ++D+   + L  + A     L 
Sbjct: 72  TQLHFSLQQLLAQQKGMKTKKPSLRAEASVYRQQRSNLEQDVLRYRRLVAEGAAPAKQLE 131

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             E  V              +  +  +     E + E  +   +I R             
Sbjct: 132 DLENQVKVV-----------ERQIASVATRNPEVDQEVRSIEAQILR------------- 167

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
                +    ++ ++++P  G ++              +PL +I       Y+R  ++  
Sbjct: 168 -----IRDQIKRSSVVNPSTGVVLA-AYAEEGEVTAYGKPLYRIA-DLDSMYLRVYLSGS 220

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           Q+  V  G +  V           K    +  I          +QT+E    ++    + 
Sbjct: 221 QLASVAIGDSVDVLVDGEKPAEH-KLSGRVSWISSKAEFTPKIIQTREDRVTMVYAVKVL 279

Query: 398 FSDNNIELRNGFPAEV 413
             + +  L+ G P E+
Sbjct: 280 VKNPDGLLKIGMPGEI 295



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 46/142 (32%), Gaps = 2/142 (1%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E   + + S  SG +  F VE G ++ +G      +  +    +       K ++    +
Sbjct: 35  ESTEIIVSSEASGKLLFFPVEEGEKLDKGAVAALVDTTQLHFSLQQLLAQQKGMKTKKPS 94

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            ++       +   LE+        + +  G   +   +     +  V R +    TR  
Sbjct: 95  LRAEASVYRQQRSNLEQDVLRYRRLVAE--GAAPAKQLEDLENQVKVVERQIASVATRNP 152

Query: 173 SIYLNRLDLENKSSLLRALLSS 194
            +      +E +   +R  +  
Sbjct: 153 EVDQEVRSIEAQILRIRDQIKR 174


>gi|325198990|gb|ADY94446.1| fatty acid resistance protein A [Neisseria meningitidis G2136]
          Length = 406

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 19/189 (10%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             L   + + R           + +L RA L+  Q DL     L E  AVS  +L     
Sbjct: 125 NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARA 184

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   ++  + E+ +    +                         Q      + +L 
Sbjct: 185 AVSQAQAAVKAALAEESSARAALGGQVSLRE-----------------QPAVQTAIGRLK 227

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  I +   G +   +S           PLM +VP S   ++ A     Q++H
Sbjct: 228 DAWLNLQRTQIRASADGQVAK-RSVQVGQQVAAGAPLMAVVPLSD-VWVDANFKETQLRH 285

Query: 342 VKKGYTATV 350
           +K G  A +
Sbjct: 286 MKIGQPAEL 294



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 57/171 (33%), Gaps = 8/171 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-----IETTDLIDLKKVSIKNL 106
               VV++     G ++K   ++   + +G  L   +D            +L +   +N 
Sbjct: 76  VAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNR 135

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           R +  T ++       + D+     + R    L   G   +     ++       +  ++
Sbjct: 136 RQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARAAVSQAQAAVKA 195

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              + +  R+    ++ L  + ++  A+       L + +     +A  Q 
Sbjct: 196 ALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRTQIRASADGQV 246


>gi|300853796|ref|YP_003778780.1| hypothetical protein CLJU_c05960 [Clostridium ljungdahlii DSM
           13528]
 gi|300433911|gb|ADK13678.1| hypothetical protein CLJU_c05960 [Clostridium ljungdahlii DSM
           13528]
          Length = 223

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 54/150 (36%), Gaps = 2/150 (1%)

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
           N+             + + +   + +PI+G IV  QS +   +    Q +   V      
Sbjct: 76  NKDEILARQEVTNTPDSSIDSSLVRAPISGIIVKKQS-TQGEFKLAGQTIAT-VADEDNV 133

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           Y+ A +  K+IQ+VK G   TV+   +   +       I  +      Q +  +  E+ +
Sbjct: 134 YVTANIDEKEIQNVKVGQAVTVKLDEFNGKKFNGKVKSIGLVSQNGLNQSSKDKNGEFKK 193

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           V  K+      +    L  G  A V    K
Sbjct: 194 VNQKVPVKIQFNKTKGLVLGTNASVKIRVK 223


>gi|145297145|ref|YP_001139986.1| membrane-fusion protein [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142849917|gb|ABO88238.1| membrane-fusion protein [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 368

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 65/200 (32%), Gaps = 20/200 (10%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E+++      + +   +             E               L+  + ++    
Sbjct: 92  KAEQLLLSLDSSVEKANLQASLAKLPAARAKFERFQNLYKKSSISKDQLDDAEASYRSLE 151

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VT 335
           + +  L+ T  ++ + +P  G +V  ++     Y Q       IV     + +R +  V 
Sbjct: 152 ADIDSLKATIARRQVRAPF-GGVVGLRNVFLGQYLQPGT---DIVRLEDTSVMRLRFTVP 207

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              I  +  G T  +    Y  ++   F   I  I+P ++ Q   +Q Q           
Sbjct: 208 QTDISKITLGQTVKINVDSYPQVQ---FDGHITAIEPAVNYQSGLIQVQ----------- 253

Query: 396 LAFSDNNIELRNGFPAEVLF 415
               +N  +LR+G  A    
Sbjct: 254 ADIPNNGGQLRSGMFARASI 273


>gi|94497125|ref|ZP_01303698.1| heavy metal RND efflux membrane fusion protein, CzcB family protein
           [Sphingomonas sp. SKA58]
 gi|94423497|gb|EAT08525.1| heavy metal RND efflux membrane fusion protein, CzcB family protein
           [Sphingomonas sp. SKA58]
          Length = 498

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 52/195 (26%), Gaps = 39/195 (20%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-------TILSPIAGTIVYN 303
           A  E+   L     +L Q  R     +     L  +  +        T+ +PI G I   
Sbjct: 173 AQQEYLAVLNSGDEELAQAMRERMRLLGMPPGLISSVGRNGRPQSTITVTAPIGGAITSL 232

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                       Q L +I       ++ A V  +Q   V+ G   +     + + R   F
Sbjct: 233 GVR-PGMTVMAGQTLAEIT-GFSPIWLEAAVPERQAATVRVGQPVSATLTAFPEER---F 287

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF-------------- 409
              I  I P        +                  + +  L+ G               
Sbjct: 288 SGPIIAILPSAQDASRTITV-----------RAQLPNASGRLKPGMFAQVSLTPDTRRAL 336

Query: 410 --PAEVLFTAKNTTL 422
             P+E +      T+
Sbjct: 337 LVPSEAVIRTGRRTI 351


>gi|256823247|ref|YP_003147210.1| RND family efflux transporter MFP subunit [Kangiella koreensis DSM
           16069]
 gi|256796786|gb|ACV27442.1| efflux transporter, RND family, MFP subunit [Kangiella koreensis
           DSM 16069]
          Length = 393

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/145 (8%), Positives = 54/145 (37%), Gaps = 3/145 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  ++   G +        +     G +K   V+ G Q+ +G  L   + ++  + + 
Sbjct: 57  ASLSPALFGIGTVEARYRYK-VGPTVPGRVKTLHVDIGEQVKKGQLLGVMDPVDLEERMQ 115

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            ++ ++   +  +   ++   F  +++   +K   +    + +          ++    +
Sbjct: 116 AQQSALMQAKAKLGEAQTRYQFAQDQFKRYQKLLAA--SSISEEQFDVKQQELRITESAL 173

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLE 182
           ++  + L  +    +++   + +LE
Sbjct: 174 AAAKQELLRQEAEQKAMLAQQHNLE 198



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 66/179 (36%), Gaps = 7/179 (3%)

Query: 204 NLFEKNAVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +L E+    Q+ L Q +  +   ++  +  ++  ++   L   + + +E        L+ 
Sbjct: 109 DLEERMQAQQSALMQAKAKLGEAQTRYQFAQDQFKRYQKLLAASSISEEQFDVKQQELRI 168

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               L   ++    + ++   +   +    ++SP+ G IV N++          Q +++I
Sbjct: 169 TESALAAAKQELLRQEAEQKAMLAQQHNLELISPVDGIIV-NRNAEQGTTVVAGQSVLEI 227

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           + +    +I  +        +  G  A ++         ++    I +++PI       
Sbjct: 228 I-NHSDIWINVRFDQIHATGLNAGLKAHIKL---RSKSNQELPGEIYRVEPIADAVTEE 282


>gi|197285083|ref|YP_002150955.1| HlyD family secretion protein [Proteus mirabilis HI4320]
 gi|194682570|emb|CAR42609.1| HlyD-family secretion protein [Proteus mirabilis HI4320]
          Length = 357

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 53/154 (34%), Gaps = 2/154 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V+ G  +  G  L T +     + +   +  ++  +  + T +SAL    ++ 
Sbjct: 58  GRIDTILVKEGDFVKAGEVLATMDTRTLKEQLHEVQAQLEQAKSSVMTAESALSQRQSEQ 117

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +     R  +L   + + + + + V    IS   + L   + R           + +
Sbjct: 118 VAAQAVVRQRIAELDASVKRLNRSRALVKTKAIS--IQQLDDDIARTEGARAAVEAAKAQ 175

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +   A + S +  +   K   +    ++  +  
Sbjct: 176 VTATIAAIDSAKSGIIQAKTKVDAATATERRIMA 209



 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/293 (10%), Positives = 77/293 (26%), Gaps = 19/293 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F    E L     +            +     S+    + +      ++  +   
Sbjct: 65  VKEGDFVKAGEVLATMDTRTLKEQLHEVQAQLEQAKSSVMTAESALSQRQSEQVAAQAVV 124

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L +  K L   + L +  A+S   L+        +   +     +    +  I+
Sbjct: 125 RQRIAELDASVKRLNRSRALVKTKAISIQQLDDDIARTEGARAAVEAAKAQVTATIAAID 184

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                 + +   A    +  + E   +   + +P  G + Y + 
Sbjct: 185 SAKSGIIQ-------------AKTKVDAATATERRIMAE--LDDSILKAPRNGRVQY-RV 228

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +       G    +       I       
Sbjct: 229 AEPGEVLGAGGRVLNMVDLSD-VYMTFFLPTEAAGKAALGSDVHIILDAAPHIVIPAKTT 287

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +  +     +  + +N + +  + V  +I+      +   ++ G P      
Sbjct: 288 YVASVAQFTPKTVETDNERLKLMFRVRARISPELLEKHLEYVKTGLPGRAYIR 340


>gi|311280329|ref|YP_003942560.1| secretion protein HlyD family protein [Enterobacter cloacae SCF1]
 gi|308749524|gb|ADO49276.1| secretion protein HlyD family protein [Enterobacter cloacae SCF1]
          Length = 331

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 80/218 (36%), Gaps = 20/218 (9%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           + +N   +       R +  + LE   +  +Q   L  +    D+ N   A    +   +
Sbjct: 125 YAQNFYQRQQGLWASRTISANDLENARSSRDQS--LASLKSAQDKLNQYHAGNRPQ---E 179

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           +E+ +       ++L   +   +  T+L+P  GTI+  ++    +       ++ +   +
Sbjct: 180 IEEARAGLEQAQAQLAQSQLDLQDTTLLAPSDGTILT-RAVEPGSMLSAGSTVLTLS-LT 237

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNN 380
           +  +IRA V  K +   + G        +        +   I  + P       + +  +
Sbjct: 238 RPVWIRAYVDEKNLGQAQPGRE---LLLYTDGRPNTPYHGKIGFVSPTAEFTPKTVETPD 294

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           L+T   Y + + +TD   +     LR G P  V FT  
Sbjct: 295 LRTDLVYRLRIVVTDADDA-----LRQGMPVTVKFTGG 327


>gi|91202707|emb|CAJ72346.1| similar to RND multidrug efflux membrane fusion protein MexC
           precursor [Candidatus Kuenenia stuttgartiensis]
          Length = 401

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 18/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E     +    D E  +       + L I +       I+SP+ G ++  +       A 
Sbjct: 143 ESRTVYETSLADAELAKAEIMQAEASLAIAKTDLGYTVIVSPLDGIVISREVDVGQTVAS 202

Query: 314 QSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI- 370
             Q   L  I        +   V    I  V+ G +A      + +     F   + +I 
Sbjct: 203 SFQTPTLFTIAKDLVSMQVNTNVDEADIGMVEVGQSARFNVDAFPED---VFDGKVTEIR 259

Query: 371 -DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             P+I Q          Y+ I+ I      +++++L+ G  A        
Sbjct: 260 MSPVIFQNVVT------YDTIVSID-----NSSLKLKPGMTANTSILVAE 298



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 1/122 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+  V ++G I      V I S  SG+I K   +  S++  G  +   +       +   
Sbjct: 41  IQKYVVATGTINPV-RTVIIGSQVSGLISKLYADFNSEVKTGQIVAQIDPTPFEHQVRKA 99

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++      +    + L     KY   +K F ++   + +F        + + +  ++ 
Sbjct: 100 EAALATALAKLKRSNAVLRNSKRKYHRAKKLFSTQVISIDEFDESRTVYETSLADAELAK 159

Query: 160 VY 161
             
Sbjct: 160 AE 161


>gi|32267357|ref|NP_861389.1| hypothetical protein HH1858 [Helicobacter hepaticus ATCC 51449]
 gi|32263410|gb|AAP78455.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 431

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 81/269 (30%), Gaps = 38/269 (14%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +  +               +N   +  + +  +A L S Q  L   +        + + L
Sbjct: 85  LEVLVDENDEVKQGQVLARINPESINQQIAKFQAQLHSAQAQLRASEQTLADKKWNYDRL 144

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            +  +    ++  L                   E      NY      D++  + T  + 
Sbjct: 145 KELYKATNGASPSL------------------LELQTAKTNYTS-ARSDVDIKRATIIEI 185

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVPHSKLTYIRAK 333
            + +   +   +   I+SP+ G ++  +S            +  L K+  + +   + A 
Sbjct: 186 QTSIESAKIDLKNSEIISPVDGIVLT-RSVEVGQSVAASFQAPTLFKVAENLEEMQLYAS 244

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY------- 386
           ++   I  VK+G         Y D   K F A + +++       ++             
Sbjct: 245 ISEADIGKVKEGQEVIFTVDAYPD---KNFHAKVNRVNFGSGDGGSSSSNTSSSTSNIIT 301

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLF 415
           Y   +++      + ++ LR    A    
Sbjct: 302 YRAKIEVD-----NKSLLLRPDMSATADI 325



 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 72/202 (35%), Gaps = 19/202 (9%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGII-----GLITWSILL---PIEISVSSSGEILN 52
           M+ +   + K+     +  M    ++G+I     G+I W++       E    + G+I +
Sbjct: 1   MNLYQTLHTKKYIGKKIPPMVWFILLGVIALCIGGIILWNLFTSQMEYETIKPTRGDIKS 60

Query: 53  ED---------NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
                      N VEI S  SG++ +  V+   ++ QG  L           I   +  +
Sbjct: 61  SISASGSLSPVNEVEIGSVISGLVLEVLVDENDEVKQGQVLARINPESINQQIAKFQAQL 120

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + +  +   +  L      YD L++ +++        L     T    +    S V   
Sbjct: 121 HSAQAQLRASEQTLADKKWNYDRLKELYKATNGASPSLLE--LQTAKTNYTSARSDVDIK 178

Query: 164 LKMKLTRMRSIYLNRLDLENKS 185
               +    SI   ++DL+N  
Sbjct: 179 RATIIEIQTSIESAKIDLKNSE 200


>gi|288941570|ref|YP_003443810.1| RND family efflux transporter MFP subunit [Allochromatium vinosum
           DSM 180]
 gi|288896942|gb|ADC62778.1| efflux transporter, RND family, MFP subunit [Allochromatium vinosum
           DSM 180]
          Length = 367

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 79/252 (31%), Gaps = 23/252 (9%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS--------QNDLNQQERIVYKSTLE 229
            ++  N+S++        Q+ L  + +  EK A+         +  ++Q    +  ++  
Sbjct: 49  IIEAVNRSTVSAQTQGQIQEILYDVDDFVEKGALLARIKDTEHRTRVSQAAADLKAASAR 108

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           LR+   E   +                + + +   DL+  +       ++L   ++    
Sbjct: 109 LRQAQEEHDRVAG-----LYRTKNVSESAMDKARADLDSAKAELEAATARLEAAQEQLAH 163

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P +G ++               P+M  +       +   V    I  V+    A+
Sbjct: 164 TEVRAPYSGIVIQRHV-ERGEIVSPGTPIMSGI-SLDALRVAVDVPQSVIPAVRGDTDAS 221

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            R   Y     +     +  I P      N       ++V +++   A   ++  L  G 
Sbjct: 222 RRAWVYLPDGTRVESGRLT-IFPFADPGSNT------FKVRVELPPSA-GASDRALFPGM 273

Query: 410 PAEVLFTAKNTT 421
             +  F     +
Sbjct: 274 YVKTSFVVGEKS 285



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 45/138 (32%), Gaps = 10/138 (7%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           I+   N   + +   G I++   +    + +G  L   +D E    +      +K     
Sbjct: 49  IIEAVNRSTVSAQTQGQIQEILYDVDDFVEKGALLARIKDTEHRTRVSQAAADLKAASAR 108

Query: 110 IDTEKSALDFLNNKY----------DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +   +   D +   Y          D      +S + +L     +  +   ++ +  + +
Sbjct: 109 LRQAQEEHDRVAGLYRTKNVSESAMDKARADLDSAKAELEAATARLEAAQEQLAHTEVRA 168

Query: 160 VYRSLKMKLTRMRSIYLN 177
            Y  + ++    R   ++
Sbjct: 169 PYSGIVIQRHVERGEIVS 186


>gi|254443868|ref|ZP_05057344.1| GAF domain protein [Verrucomicrobiae bacterium DG1235]
 gi|198258176|gb|EDY82484.1| GAF domain protein [Verrucomicrobiae bacterium DG1235]
          Length = 598

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 76/222 (34%), Gaps = 15/222 (6%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLE 267
             + Q        IV    L +  +  E    L  +N   D    +      E    ++ 
Sbjct: 378 GYIDQVH-RDVGDIVEADDLLMELDRRELVVQLAELNANRDRNLTDARRLEGEGELTEMR 436

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSK 326
             Q       +K+ +L+    +  + +P  G IV  +     S+  Q  + L ++V    
Sbjct: 437 LAQLAAQQVEAKIAVLDYRLSKTELRAPFDGIIVEGDLRERLSSPVQAGETLYRLVKLEG 496

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
             Y   +V  + I ++ +     +    +      ++   +++ +P+   +++      Y
Sbjct: 497 -LYGELRVDERDINYLFQDQVGQM---AFTSRPYDRYDVRLDQFEPVAIIEESGT----Y 548

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           + V + + D      +   R G        A   ++A  ++H
Sbjct: 549 FRVRIHLVDA----PDEWWRPGMSGVCKVDAGKRSVAWILMH 586


>gi|88799890|ref|ZP_01115462.1| Secretion protein HlyD [Reinekea sp. MED297]
 gi|88777321|gb|EAR08524.1| Secretion protein HlyD [Reinekea sp. MED297]
          Length = 401

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 62/164 (37%), Gaps = 6/164 (3%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R    S++E  +   E         +      +     L++    ++  Q     +
Sbjct: 138 LELQRNQQISSIEATQANLELAESQLRRTDDLVAKGIAPTTQLEQQQSSVKAMQANLKAQ 197

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
             +L ++E+      + SPI+G +      S   +     P+ +IV  +    ++A +  
Sbjct: 198 QGQLKLVEQQLSDAVVNSPISGEVSARNVDS-GQFVSAGTPMFEIVSLN-RLEMQASLPA 255

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
            +   ++ G    V    + D  E+ F   +E+I P++SQ    
Sbjct: 256 AKAPALQPGMKVQV----FVDGHERVFNGQVERISPVVSQGTQT 295



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 50/141 (35%), Gaps = 17/141 (12%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V  +G +        + S  S  + +  V  G  + +G+ L+  +        + +
Sbjct: 87  LRETVRLTGTLQPVVKEQ-VPSLVSAPLLQVNVRIGDSVTRGSELVRMDTTTLELQRNQQ 145

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             SI+  + +++  +S L                R    L   G   +T  +     + +
Sbjct: 146 ISSIEATQANLELAESQL----------------RRTDDLVAKGIAPTTQLEQQQSSVKA 189

Query: 160 VYRSLKMKLTRMRSIYLNRLD 180
           +  +LK +  +++ +     D
Sbjct: 190 MQANLKAQQGQLKLVEQQLSD 210


>gi|83943501|ref|ZP_00955960.1| periplasmic component of efflux system [Sulfitobacter sp. EE-36]
 gi|83845733|gb|EAP83611.1| periplasmic component of efflux system [Sulfitobacter sp. EE-36]
          Length = 402

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 68/212 (32%), Gaps = 29/212 (13%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
           ++    +E    I          +          A+   + + +L       AD +S+  
Sbjct: 103 VMEGEEVEGGAVIARLSATGAQADLARAREEFARADREFKNATELLNRGVATADRVSQAR 162

Query: 282 IL-----------EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                        ++  E   I +P  G +      +   + Q    + +IV  ++   +
Sbjct: 163 ATLAAAEASVTAAQEAIEALVITAPFTGRVEELSLDA-GEFIQAGAEVGRIV-DNRPLTV 220

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
             +V  + +  +K G TATV F     I  ++ +  +  +    + +             
Sbjct: 221 ALQVPQQALGQIKSGQTATVNF-----ITGEEREGTVSFVSTAANAETRTF--------- 266

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
             +T +   + +  +  G  AE+     +T+ 
Sbjct: 267 --LTKITVPNEDGAIPAGISAEIRIPTGSTSA 296



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 56/200 (28%), Gaps = 6/200 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G+   + +   I++  SG +    V  G ++  G  +           +   +     
Sbjct: 78  AEGQAQPDRDT-SIRAEASGDVVDVLVMEGEEVEGGAVIARLSATGAQADLARAREEF-- 134

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                D E      L N+              L        +    +    I++ +    
Sbjct: 135 --ARADREFKNATELLNRGVATADRVSQARATLAAAEASVTAAQEAIEALVITAPFTGRV 192

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
            +L+     ++       +    R L  + Q     +  +      + N +  +ER    
Sbjct: 193 EELSLDAGEFIQAGAEVGRIVDNRPLTVALQVPQQALGQIKSGQTATVNFITGEEREGTV 252

Query: 226 STLELRENIHEQKNMLRHIN 245
           S +    N  E +  L  I 
Sbjct: 253 SFVSTAAN-AETRTFLTKIT 271


>gi|238926368|ref|ZP_04658128.1| RND family efflux transporter MFP subunit [Selenomonas flueggei
           ATCC 43531]
 gi|238885772|gb|EEQ49410.1| RND family efflux transporter MFP subunit [Selenomonas flueggei
           ATCC 43531]
          Length = 349

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 57/204 (27%), Gaps = 18/204 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            ++  D+ QQ           R  +   +       ELY  A       L +   +    
Sbjct: 87  VINARDIQQQANAAGAGVASARAQLDLARANRARYEELYA-AQAISEAMLDQYRTNERAA 145

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +  +   +++ T          +++   G I    +          Q +M +        
Sbjct: 146 EAAYRQALAQNTQSSNALGYTNLIAGADGVISGIAA-EEGQVVAAGQTVMTLT-QDGERE 203

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I   V   ++  V  G  A V                + +I P+             Y V
Sbjct: 204 IEIAVPESRLAEVSIGMPAAVSLWA----NHAALTGTVREIAPVADAAGGT------YAV 253

Query: 390 ILKITDLAFSDNNIELRNGFPAEV 413
            + + D   +  ++ L  G  A V
Sbjct: 254 RIALAD---APADLPL--GMTAHV 272



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 16/155 (10%), Positives = 42/155 (27%), Gaps = 4/155 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I    V  G+ +  G  L+     +     +     + + R  +D  ++        
Sbjct: 65  GGQILSRNVSLGAHVHAGDVLMVINARDIQQQANAAGAGVASARAQLDLARANRARYEEL 124

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y     +    ++   +      +    +     SS        +     +       E 
Sbjct: 125 YAAQAISEAMLDQYRTNERAAEAAYRQALAQNTQSSNALGYTNLIAGADGVISGIAAEEG 184

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +       + +  +D      +    AV ++ L +
Sbjct: 185 QVVAAGQTVMTLTQDGEREIEI----AVPESRLAE 215


>gi|288576205|ref|ZP_05978389.2| multidrug resistance protein A [Neisseria mucosa ATCC 25996]
 gi|288566046|gb|EFC87606.1| multidrug resistance protein A [Neisseria mucosa ATCC 25996]
          Length = 396

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 80/273 (29%), Gaps = 31/273 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F          L   + + +         + +  L +A L+  Q DL   + L   +A+S
Sbjct: 102 FQLAYDRAQNELIQAIRQNKQQTAVNSQAKAQVLLRKADLARAQADLRRREALSGTDAIS 161

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +L+     V ++   L+    E+ +    +                       + Q  
Sbjct: 162 GEELSHARAAVVQAQAALKAVEAEEASAQAALGNNIP-----------------VREQPA 204

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +SK+       ++  I +P+ G I             Q   LM +VP +   ++ A
Sbjct: 205 VQTAVSKIKDAWLNLQRTQIRAPMGGQIAKRNV-QVGQRISQGAALMAVVPLTD-LWVDA 262

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-------- 384
                Q++ +K G             ++  +   +  +        + L  Q        
Sbjct: 263 NFKESQLRKMKIGQPVE--MTADLYGKKVVYHGKVMGLSAGTGSAFSLLPPQNATGNWIK 320

Query: 385 --EYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +   V + +       N + +      +V  
Sbjct: 321 VVQRVPVRISLDPNELKANPLRVGLSMTVKVDI 353



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 69/188 (36%), Gaps = 11/188 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET-----TDLIDLKKVSIKNL 106
               +V+I     G ++K   ++   + +G  L+T +D +          +L +   +N 
Sbjct: 62  VAGYLVQITPQVGGTVRKVTFDDTDVVKKGDVLVTLDDSDFQLAYDRAQNELIQAIRQNK 121

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLL---DFLGKYHSTCSKVFNYGISSVYRS 163
           +      ++    L  K D+     + R  + L   D +     + ++       +  ++
Sbjct: 122 QQTAVNSQAKAQVLLRKADLARAQADLRRREALSGTDAISGEELSHARAAVVQAQAALKA 181

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQE 220
           ++ +    ++   N + +  + ++  A+       L + +          +++ ++   +
Sbjct: 182 VEAEEASAQAALGNNIPVREQPAVQTAVSKIKDAWLNLQRTQIRAPMGGQIAKRNVQVGQ 241

Query: 221 RIVYKSTL 228
           RI   + L
Sbjct: 242 RISQGAAL 249


>gi|150005325|ref|YP_001300069.1| periplasmic component of efflux system [Bacteroides vulgatus ATCC
           8482]
 gi|294777169|ref|ZP_06742626.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
           PC510]
 gi|149933749|gb|ABR40447.1| periplasmic component of efflux system [Bacteroides vulgatus ATCC
           8482]
 gi|294449038|gb|EFG17581.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
           PC510]
          Length = 407

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 64/210 (30%), Gaps = 18/210 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            Q E    K+T +  E  ++ +  L   N    E  L      +E   + ++ Q      
Sbjct: 96  LQSELQSAKATYDGNEAEYDYQKKLYDRNRKLHEKQLISDMDYEETVYNFQRAQSALEQS 155

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAK 333
            + L   E+     TI SPI G +   +                L  I        + A 
Sbjct: 156 KAALAKAERNLSYATITSPIDGVVTS-RDVEEGQTVASGFETPTLFTIAADLTKMQVVAD 214

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------DPIISQQDNNLQTQEYY 387
           V    I  V++G   T     Y D     F+ ++ ++          S       T   Y
Sbjct: 215 VDEADIAGVEEGTRVTFTVDAYPDD---VFEGVVRQVRLGSTNSTSSSSSTTTSTTVVTY 271

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           EV++   +       ++L+    A      
Sbjct: 272 EVVITADNPY-----LKLKPRLTANATIYT 296



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 50/142 (35%), Gaps = 1/142 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++++G I     V E+ +  SGII K  V+  S + +G  +   + +     +   K + 
Sbjct: 49  ITATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSVVKKGELIAEMDKVTLQSELQSAKATY 107

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                  D +K   D     ++    +    EE + +F     +          +    S
Sbjct: 108 DGNEAEYDYQKKLYDRNRKLHEKQLISDMDYEETVYNFQRAQSALEQSKAALAKAERNLS 167

Query: 164 LKMKLTRMRSIYLNRLDLENKS 185
                + +  +  +R   E ++
Sbjct: 168 YATITSPIDGVVTSRDVEEGQT 189


>gi|115360754|ref|YP_777891.1| RND family efflux transporter MFP subunit [Burkholderia ambifaria
           AMMD]
 gi|115286082|gb|ABI91557.1| efflux transporter, RND family, MFP subunit [Burkholderia ambifaria
           AMMD]
          Length = 331

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 71/226 (31%), Gaps = 27/226 (11%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q      ER+   +  + R  + + K   R         NL  +  ++E    +EQ 
Sbjct: 77  VIDQARYALAERLAEATLAQRRATLAQAK---REYTRNLQLGNLVASEQVEESRTRVEQG 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   AD    L   +   ++ TI+SP+ G  + +++     Y    + ++ +V       
Sbjct: 134 EAAVADAQVSLDTAKLNLQRTTIVSPVDGY-LNDRAPRVGEYVPAGRAVLSVV-DRNSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----- 384
           +       +++ +  G    +             +  ++ I   I  +D           
Sbjct: 192 VDGYFEETKLRGIHIGQPVDIVVMGEPH----PLRGHVQSIVAAIEDRDRTQGANLLPNV 247

Query: 385 ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                     +   V + + ++    ++  +  G  A V       
Sbjct: 248 NPAFSWVRLAQRVPVRVVLDEV---PDDFRMIAGRTATVAVRTDTR 290



 Score = 41.5 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 41/118 (34%), Gaps = 6/118 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++    +G+I   QV +  ++ +G  L   +         L + ++   R  + 
Sbjct: 43  VRADVIQVAPDVAGLITAVQVADNQEVKRGQVLFVIDQARYALAERLAEATLAQRRATLA 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             K            L+       EQ+ +   +     + V +  +S     L ++ T
Sbjct: 103 QAKREYTR------NLQLGNLVASEQVEESRTRVEQGEAAVADAQVSLDTAKLNLQRT 154


>gi|330963136|gb|EGH63396.1| HlyD family secretion protein [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 388

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 52/140 (37%), Gaps = 5/140 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V  G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVREGQQVRAGELLATLDDRSIRASLEQTRAQL 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +D   + LD    +    +     +       L +  +  ++     I++    
Sbjct: 114 AQSKAQLDV--AQLDLKRYRQLTEDNGISRQTFDQQQALVRQLAATAQGNEASINAAQVQ 171

Query: 164 LKMKLTRMRSIYLNRLDLEN 183
           L    T++RS    R+ + N
Sbjct: 172 LS--YTQIRSPVTGRVGIRN 189



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 40/127 (31%), Gaps = 17/127 (13%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L  +       +   E +       +R ++ + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVREG----QQVRAGELLATLDDRSIRASLEQTRAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q   T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTEDNGISRQTFDQQQALVRQLAATAQGNEASINAAQVQLSYTQIR 178

Query: 294 SPIAGTI 300
           SP+ G +
Sbjct: 179 SPVTGRV 185


>gi|315296129|gb|EFU55438.1| efflux pump membrane protein [Escherichia coli MS 16-3]
          Length = 343

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 86/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L  +  VS  ++++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      ++++  G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIHSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|320354091|ref|YP_004195430.1| RND family efflux transporter MFP subunit [Desulfobulbus
           propionicus DSM 2032]
 gi|320122593|gb|ADW18139.1| efflux transporter, RND family, MFP subunit [Desulfobulbus
           propionicus DSM 2032]
          Length = 389

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 79/252 (31%), Gaps = 22/252 (8%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST-------LELREN 233
           +  + + L    +   K   ++  L+ K+  ++  L + E I  ++         +L E 
Sbjct: 67  IGGQIATLHVRKADTVKAGQILLTLWNKDLQAELQLARSETIAAEAAVRENCLMADLAER 126

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              ++  LR      +    E     +      E      A   +++   E T E+  ++
Sbjct: 127 QAARQRELRTTKATSESKYDEAQATARARRAACEAATARRAVSAARVKATEATLERTILI 186

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-----LTYIRAKVTPKQIQHVKKGYTA 348
           +P  G +          Y   S P +  +P          Y+ A +       ++ G   
Sbjct: 187 APFDGIVAEVNG-EVGEYLTPSPPGIATLPAVDLINMQSLYVAAPIDEIDAAQIRPGMAV 245

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            +    +           +  I P + +     +T     V ++  D A +     L  G
Sbjct: 246 RISLDAFPKQSFP---GTVHSISPYVLEVAKQART-----VEIE-ADFAQNAAPPNLLAG 296

Query: 409 FPAEVLFTAKNT 420
           + A+V       
Sbjct: 297 YSADVEIILATR 308



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 18/60 (30%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   N   +  P  G I    V     +  G  LLT  + +    + L +         +
Sbjct: 55  VKARNRANLTPPIGGQIATLHVRKADTVKAGQILLTLWNKDLQAELQLARSETIAAEAAV 114


>gi|42783746|ref|NP_980993.1| hypothetical protein BCE_4700 [Bacillus cereus ATCC 10987]
 gi|42739676|gb|AAS43601.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
          Length = 217

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYA 312
           +  ++  E+ ++  +N     D++  +T+     EQ   +  P   T+V + + +++ + 
Sbjct: 57  KLTDWKAEVGKNYNEN-----DKLGAVTVAAANGEQTVDVTIPQNATVVQSNA-TTNAFV 110

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+          ++ A +    I  V+KG T  V    Y D         +E++  
Sbjct: 111 GAGSPIAYAF-DMNNLWVTANIEETVIDDVQKGQTVDVYVDAYPDTT---LTGKVEQVGL 166

Query: 373 IISQQ----DNNLQTQEYYEVILKITDLAFSD--NNIELRNGFPAEVLFT 416
             +       ++  T  Y +V   +      D   ++ +  G    V   
Sbjct: 167 TTANTFSMLPSSNATANYTKVKQVVPVKISLDHSKSVNIVPGMNVSVRIH 216


>gi|330873028|gb|EGH07177.1| HlyD family secretion protein [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 388

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 52/140 (37%), Gaps = 5/140 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V  G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVREGQQVRAGELLATLDDRSIRASLEQTRAQL 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +D   + LD    +    +     +       L +  +  ++     I++    
Sbjct: 114 AQSKAQLDV--AQLDLKRYRQLTEDNGISRQTFDQQQALVRQLAATAQGNEASINAAQVQ 171

Query: 164 LKMKLTRMRSIYLNRLDLEN 183
           L    T++RS    R+ + N
Sbjct: 172 LS--YTQIRSPVTGRVGIRN 189



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 40/127 (31%), Gaps = 17/127 (13%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L  +       +   E +       +R ++ + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVREG----QQVRAGELLATLDDRSIRASLEQTRAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q   T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTEDNGISRQTFDQQQALVRQLAATAQGNEASINAAQVQLSYTQIR 178

Query: 294 SPIAGTI 300
           SP+ G +
Sbjct: 179 SPVTGRV 185


>gi|327478706|gb|AEA82016.1| Type I antifreeze protein:HlyD family secretion protein
           [Pseudomonas stutzeri DSM 4166]
          Length = 358

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 85/228 (37%), Gaps = 11/228 (4%)

Query: 9   LKRNHPASLKRMTL-LSIIGIIGLITWSIL---LPIEISVSSSGEILNEDNVVEIKSPFS 64
           +K     +L+R+   L  + +IGL+ WS L      +   S +G I   +  +++ +   
Sbjct: 1   MKAPAQKTLRRVLFALVALVVIGLLAWSELRTDGLGDGFASGNGRIEATE--IDVATKLG 58

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I++  V+ G  +  G  +   +       ++  +  ++     I T ++ +    ++ 
Sbjct: 59  GRIREISVDEGDFVQPGQVIARMDTEVLEAQLNQARAQVRQAENAILTAQALVTQRESEK 118

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E     R  +L     ++  T + V    +    + L   L  M+S          +
Sbjct: 119 ATAEAVVLQRRAELTAAQKRHQRTETLVGRNAMP--RQQLDDDLAAMQSAQAALAASRAQ 176

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                A +++ +  +   ++  E    +Q  + + +  +  S L+   
Sbjct: 177 VLSADAGIAAARSQVIEAQSALE---AAQASVVRLQADITDSELKTDR 221


>gi|147679120|ref|YP_001213335.1| hypothetical protein PTH_2785 [Pelotomaculum thermopropionicum SI]
 gi|146275217|dbj|BAF60966.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 223

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 11/131 (8%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + SPI+GT++  +  +        QP++ +V      YI A +    +  VK G     
Sbjct: 95  VVRSPISGTVIK-KIGNVGEVGVPGQPIV-MVADLNSLYITANIEETDLYKVKVGQKVD- 151

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEV--ILKITDLAFSDNNIE 404
            F     +   KF+  +  I    +           +  + +V   + +     S     
Sbjct: 152 -FT-IDSVPGVKFEGKVVSIGEATTSTFSLLPAQNTSGNFTKVVQRIPVKIGIKSYQGRR 209

Query: 405 LRNGFPAEVLF 415
           L  G  A V  
Sbjct: 210 LLPGMNAVVRI 220



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 15/35 (42%)

Query: 52 NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           +  +V++    SG I +  V  G  + +G  +  
Sbjct: 41 VDGTIVKVSPQVSGRISEMSVAEGDAVKEGQIIAR 75


>gi|116623649|ref|YP_825805.1| RND family efflux transporter MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116226811|gb|ABJ85520.1| efflux transporter, RND family, MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 447

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 54/154 (35%), Gaps = 15/154 (9%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           + +     +   +   + L+ L + +  +T+ +P  G I   ++  +     +   L+  
Sbjct: 218 LEQASAAARSNVSAAEANLSRLNQLKTYQTVRAPFDGVIT-LRNVDTGALVNEGSTLLFR 276

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           +  +    I   +   +   +K G  A +     A++  KKF  ++ +    +      L
Sbjct: 277 IAQTGTLRIYVNLPQSEADSIKPGQRADISI---AELIGKKFTGVVTRTSNALDPATRTL 333

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                      +T++   ++   L  G  A V  
Sbjct: 334 -----------LTEVQVPNSGGALMPGMYANVDL 356


>gi|296103250|ref|YP_003613396.1| Putative multidrug resistance protein K [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295057709|gb|ADF62447.1| Putative multidrug resistance protein K [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 364

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 52/160 (32%), Gaps = 4/160 (2%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + +VV I    +G +    V +  ++ +   L+  +  +TT   D  +  +      +  
Sbjct: 60  DGDVVTIAPKTAGYVTALHVRDNQRVKKDDLLVVIDPRDTTAQRDQAQAQLGLAIAQLHQ 119

Query: 113 EKSALDFLNNKYDVLEKAFESR----EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            ++ L     +Y       +++    +  L +   +Y                 S   +L
Sbjct: 120 AQAQLALSKVQYPAQRDEAKAQVLKAQADLANAQAEYRRQRGVDPRATTQQSIDSANAQL 179

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              ++   +       +  ++  +   + ++   +   ++
Sbjct: 180 RSAQAALASAQAQLEVAEQVQLQIRQQETNVEARERQVDQ 219



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/241 (10%), Positives = 67/241 (27%), Gaps = 8/241 (3%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A   R+ Q +           +            L + + ++          + +    R
Sbjct: 76  ALHVRDNQRVKKDDLLVVIDPRDTTAQRDQAQAQLGLAIAQLHQAQAQLALSKVQYPAQR 135

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               +  + L    +L    A  +       R   + +++                +   
Sbjct: 136 D--EAKAQVLKAQADLANAQAEYRRQRGVDPRATTQQSIDSANAQLRSAQAALASAQAQL 193

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           E   +    +++   ++E  +R      ++L           + +P  G +         
Sbjct: 194 EVAEQVQLQIRQQETNVEARERQVDQAKAQLETANLNLSYTEVRAPFDGFVTKRNV-QPG 252

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              Q    L  +V  S   ++ A     Q++ +K G    V    + D+     +  ++ 
Sbjct: 253 TLVQAGTALFSLV--SPNVWVVANFKESQLERMKPGDKVEVSVDAWPDM---ALEGHVDS 307

Query: 370 I 370
           I
Sbjct: 308 I 308


>gi|191168770|ref|ZP_03030547.1| multidrug resistance protein MdtN [Escherichia coli B7A]
 gi|256019732|ref|ZP_05433597.1| multidrug resistance protein MdtN [Shigella sp. D9]
 gi|332280868|ref|ZP_08393281.1| multidrug resistance protein MdtN [Shigella sp. D9]
 gi|190901197|gb|EDV60969.1| multidrug resistance protein MdtN [Escherichia coli B7A]
 gi|323946219|gb|EGB42253.1| efflux pump membrane protein [Escherichia coli H120]
 gi|332103220|gb|EGJ06566.1| multidrug resistance protein MdtN [Shigella sp. D9]
          Length = 343

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 87/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     +            ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPFEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSIN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPFEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSINATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|226943794|ref|YP_002798867.1| HlyD family secretion protein [Azotobacter vinelandii DJ]
 gi|226718721|gb|ACO77892.1| Secretion protein, HlyD family [Azotobacter vinelandii DJ]
          Length = 358

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 56/169 (33%), Gaps = 5/169 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I +  V+ G  +  G  L   +       +   K  +      I T ++ +    ++
Sbjct: 58  SGRIAEIHVDEGDFVQPGQILARMDTQVLEAQLGEAKAQVSKAENAILTARARVAQRRSE 117

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +   E     R+ +L+    + H   + +     +   + L      M S          
Sbjct: 118 HAAAESVVRQRQAELVA--AEKHFQRTDILVKRNAMSRQQLDDDRANMLSAQAALATARA 175

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +     A + + + ++   ++  E    ++  + + +  +  S L+   
Sbjct: 176 QVLSAEATIKAAESEVIEAESTLE---AARATVRRLQADIDDSQLKTDR 221


>gi|332763285|gb|EGJ93527.1| hlyD family secretion family protein [Shigella flexneri K-671]
          Length = 273

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 68  AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 126

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 127 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 184

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 185 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 241

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 242 VYRLRIVVTDADDA-----LRQGMPVTV 264


>gi|307256436|ref|ZP_07538218.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|307260866|ref|ZP_07542552.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306865066|gb|EFM96967.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306869433|gb|EFN01224.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 393

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 55/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+  V ++G +       E+ +  SG I    V  G Q+ +G  L   +    ++ +   
Sbjct: 44  IDKHVLATGSVRAS-KRTEVGAQVSGKIINLYVTLGQQVKKGDLLAEIDSSNQSNSLSTA 102

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++ + +  + + + AL+   + ++ L K ++ +     DF    ++  S      + +
Sbjct: 103 EATLSSYQAQLKSAQVALEVAQSNFNRLNKLYKQQSASQSDFETAKNTLASA--RATVDN 160

Query: 160 VYRSLKMKLTRMRSIYLN 177
           V   +K     +     N
Sbjct: 161 VKAQIKSAQISVNDAKTN 178



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 82/230 (35%), Gaps = 25/230 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLR---HINELYDEANLEFANYLKEISRDLEQNQ 270
           N L+  E  +     +L+      +        +N+LY + +   +++ +     L   +
Sbjct: 97  NSLSTAEATLSSYQAQLKSAQVALEVAQSNFNRLNKLYKQQSASQSDF-ETAKNTLASAR 155

Query: 271 RTFADEMSKLTILE-------KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-- 321
            T  +  +++   +              I+SP+ GTIV     S       +Q    I  
Sbjct: 156 ATVDNVKAQIKSAQISVNDAKTNLNYTQIVSPMDGTIVSIPV-SVGQTVNANQTSPTIIH 214

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V       ++ +++   I  VK G    +RF   A+       + I+ +DP ++   ++ 
Sbjct: 215 VADLSKMLVKLEISEGDIAQVKAGQA--IRFTTLAEPNH-THNSKIDSVDPALTTLSDDN 271

Query: 382 QTQEYYEVILKITDLAFSDNNI------ELRNGFPA--EVLFTAKNTTLA 423
            + +Y E       + +  N++       LR G     +V    +   L 
Sbjct: 272 ASNKYAEKSGNTEAIYYYANSLVENSEQRLRIGMTVQGQVDIVKRENVLI 321


>gi|317154948|ref|YP_004122996.1| RND family efflux transporter MFP subunit [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316945199|gb|ADU64250.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 402

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 52/140 (37%), Gaps = 4/140 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ ++ + G ++   +V EIKS   GII++  V NG  + +G  L   +       +   
Sbjct: 51  VDYTLGAVGNVVPLASV-EIKSRVGGIIEEQLVVNGQDVRKGDLLFRIDPRSFDLAVLEA 109

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  +   R H+   +  L   +   D   V ++ ++    +            + +    
Sbjct: 110 EARLARDRAHLVKARENLRRYSTLRDMNVVAQQQYDDTYAEATALENTIRLNEATLAQSR 169

Query: 157 ISSVYRSLKMKLTRMRSIYL 176
           +   Y ++   ++    I  
Sbjct: 170 LDREYAAITAPISGRVGIIQ 189


>gi|167646650|ref|YP_001684313.1| secretion protein HlyD family protein [Caulobacter sp. K31]
 gi|167349080|gb|ABZ71815.1| secretion protein HlyD family protein [Caulobacter sp. K31]
          Length = 361

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 75/260 (28%), Gaps = 14/260 (5%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E +   ++      +  + + R  ++     +       +F    +    ++      + 
Sbjct: 57  ESTDDAYVQAARAAISPSIDGRVIEIDVGENQTVRKGQVLFRLDPADFQVAVAQAEAALA 116

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +                A L++ Q+ +        + A  Q DL                
Sbjct: 117 AARFETQGSRATYDQRNADLAAAQETVAYT----AREAARQRDLAGAGVATKAQADAAAH 172

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +  + +  +  + +    A  +        S      Q       + L          TI
Sbjct: 173 DAEQARRQIAVVRQQIASALADIGGRPDVAS----DRQPKVMQAKAALDRARLDLGYTTI 228

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++P  G +   +     N    SQ L  +V  S   +I A     Q+ H++ G  AT++ 
Sbjct: 229 VAPADGVVTKVEQLQVGNRVTASQTLFWLV--SGRPWIEANFKEDQLAHMRVGQPATIKV 286

Query: 353 PHYADIREKKFKAIIEKIDP 372
             Y        KA +    P
Sbjct: 287 DAYDH----DLKAHVASFSP 302



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 72/240 (30%), Gaps = 25/240 (10%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL------NEDNVVEIK 60
           +N  R  P    R  L+    +I      +L  +   V + G+         +     I 
Sbjct: 19  RNRNRRTPGQRLRWPLMIGGPLI------VLAIVAYCVLTGGKFESTDDAYVQAARAAIS 72

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
               G + +  V     + +G  L   +  +    +   + ++   R      ++  D  
Sbjct: 73  PSIDGRVIEIDVGENQTVRKGQVLFRLDPADFQVAVAQAEAALAAARFETQGSRATYDQR 132

Query: 121 NNKYDVLEK--AFESREEQLLDFLG----------KYHSTCSKVFNYGISSVYRSLKMKL 168
           N      ++  A+ +RE      L              +  ++     I+ V + +   L
Sbjct: 133 NADLAAAQETVAYTAREAARQRDLAGAGVATKAQADAAAHDAEQARRQIAVVRQQIASAL 192

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIVYKST 227
             +        D + K    +A L   + DL     +      V++ +  Q    V  S 
Sbjct: 193 ADIGGRPDVASDRQPKVMQAKAALDRARLDLGYTTIVAPADGVVTKVEQLQVGNRVTASQ 252


>gi|119356317|ref|YP_910961.1| RND family efflux transporter MFP subunit [Chlorobium
           phaeobacteroides DSM 266]
 gi|119353666|gb|ABL64537.1| efflux transporter, RND family, MFP subunit [Chlorobium
           phaeobacteroides DSM 266]
          Length = 363

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 25/209 (11%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R    + LE +    E+         L+ E  L   + L E  R   Q +     +  +L
Sbjct: 101 REAQAAFLEQQAVNQEKTMKYSRARNLFREGALARQD-LDEAKRISSQAEELLEQKRLQL 159

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              E   ++  I +P AG ++  QS    +Y   +  + ++V  +    +  ++    + 
Sbjct: 160 KSREDELKKIAITAPFAG-VLTLQSVKKGDYVTANMLVARVV-DTSKYVVSVEIDELDVP 217

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            ++ G  A V        R          +  I+ Q D   +T   Y        L F  
Sbjct: 218 RIRPGQAAVVVLDALPTERYDAV------VSRIVPQTDTITKTSRVY--------LTFRK 263

Query: 401 NNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
               ++ G                  I P
Sbjct: 264 AVTGIQAGMTITANIV--------YHIKP 284



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 16/130 (12%), Positives = 44/130 (33%), Gaps = 3/130 (2%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               +  ++ ++G +  E  V  + S  SG +       G Q+  G  +++ ++ +    
Sbjct: 41  TYAELVQAIYATGFVEAEA-VANLSSELSGTVNYIGALEGQQVTAGQTIISLDNAQPG-- 97

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           I +++     L      ++  + +   +    E A   ++      +        +    
Sbjct: 98  ISVREAQAAFLEQQAVNQEKTMKYSRARNLFREGALARQDLDEAKRISSQAEELLEQKRL 157

Query: 156 GISSVYRSLK 165
            + S    LK
Sbjct: 158 QLKSREDELK 167


>gi|269139365|ref|YP_003296066.1| multidrug resistance efflux pump [Edwardsiella tarda EIB202]
 gi|267985026|gb|ACY84855.1| multidrug resistance efflux pump [Edwardsiella tarda EIB202]
 gi|304559270|gb|ADM41934.1| Multidrug resistance efflux pump [Edwardsiella tarda FL6-60]
          Length = 371

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 69/218 (31%), Gaps = 24/218 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   + +   +L+       +   +    +   +  RA+  + +  +   + L +K  +S
Sbjct: 96  FALEVKAADLALQQAAQSYHADSASIKVAQANEASARAVAHNARLQVERYRVLLKKGTIS 155

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q  ++     +  +   L +     +          +E                      
Sbjct: 156 QAAMDDTLTQLKTAEANLAQTTSALEKARFESGPRGEEN-------------------PE 196

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +++        E   + +P  G I      +  NYA   QPL+  + ++   ++ A
Sbjct: 197 IQTVLNRRAQARLNLEYTDLRAPANGVITNMAL-AKGNYASAGQPLLTFI-NTDKLWLTA 254

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
            V    + H+K+G    V    Y+  R   F   I  I
Sbjct: 255 MVRENSLAHLKRGDGVKVVLDAYSGQR---FSGKISSI 289



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/207 (8%), Positives = 65/207 (31%), Gaps = 11/207 (5%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            ++     + +T    + ++ L  +S+    +     +        ++ +    SG I  
Sbjct: 16  AQDKTTQARSLTYSIFLAVVILWIYSLWA--DRVTPMTDMGRVNGEIIRLVPQVSGPIAD 73

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V N  ++ +G  L T +       +    ++++        + +++            
Sbjct: 74  IDVANNDEVTKGQLLATIDKTPFALEVKAADLALQQAAQSYHADSASIKVAQANEASARA 133

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              +          +      +V     +    ++   LT++++   N     +     R
Sbjct: 134 VAHN---------ARLQVERYRVLLKKGTISQAAMDDTLTQLKTAEANLAQTTSALEKAR 184

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                  ++   ++ +  + A ++ +L
Sbjct: 185 FESGPRGEENPEIQTVLNRRAQARLNL 211


>gi|227536275|ref|ZP_03966324.1| secretion protein HlyD family protein [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227243882|gb|EEI93897.1| secretion protein HlyD family protein [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 329

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 92/267 (34%), Gaps = 14/267 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+K  V  G  + +G  L+  E  E T   +  K ++       +  +      + + 
Sbjct: 48  GKIEKILVSEGQHVRKGDTLIMLEIPEVTAKEEQAKGALDAAEAQYEMARKGAT--DGQL 105

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L       +EQL DF  K  +  S +    +    +       + +      +  E +
Sbjct: 106 KQLNAKVAGLKEQL-DFAEKSLNRLSNLLRDSLVPQQK-YDEVYAKYQGAKNQYIAAEAE 163

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S +R      Q+ + + +      AV++ ++  +ER +        E+I+     +  +
Sbjct: 164 LSDVRNGARVEQQRMALGQKERALGAVNEVNVAAKERFLIAPQDMTVESIN---LKVGEL 220

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                     + +        L + +     + +++ +    ++ + I   ++  I    
Sbjct: 221 ALAGYAIVNGYLDETTYFRFTLTEKKMAALRQGTEVNVRIPYKDNQVIKGSVS-YIKALN 279

Query: 305 SFSSSNYAQQS----QPLMKI--VPHS 325
           S+++   A       + L +I  VP  
Sbjct: 280 SYANIATAYPDFDQQESLFEIKVVPAD 306


>gi|227355498|ref|ZP_03839893.1| HlyD-family secretion protein [Proteus mirabilis ATCC 29906]
 gi|227164294|gb|EEI49183.1| HlyD-family secretion protein [Proteus mirabilis ATCC 29906]
          Length = 357

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 53/154 (34%), Gaps = 2/154 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V+ G  +  G  L T +     + +   +  ++  +  + T +SAL    ++ 
Sbjct: 58  GRIDTILVKEGDFVKAGEVLATMDTRTLKEQLHEVQAQLEQAKSSVMTAESALSQRQSEQ 117

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +     R  +L   + + + + + V    IS   + L   + R           + +
Sbjct: 118 VAAQAVVRQRIAELDASVKRLNRSRALVKTKAIS--IQQLDDDIARTEGARAAVEAAKAQ 175

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +   A + S +  +   K   +    ++  +  
Sbjct: 176 VTATIAAIDSAKSGIIQAKTKVDAATATERRIMA 209



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/293 (10%), Positives = 77/293 (26%), Gaps = 19/293 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F    E L     +            +     S+    + +      ++  +   
Sbjct: 65  VKEGDFVKAGEVLATMDTRTLKEQLHEVQAQLEQAKSSVMTAESALSQRQSEQVAAQAVV 124

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A L +  K L   + L +  A+S   L+        +   +     +    +  I+
Sbjct: 125 RQRIAELDASVKRLNRSRALVKTKAISIQQLDDDIARTEGARAAVEAAKAQVTATIAAID 184

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                 + +   A    +  + E   +   + +P  G + Y + 
Sbjct: 185 SAKSGIIQ-------------AKTKVDAATATERRIMAE--LDDSILKAPRNGRVQY-RV 228

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +  +       G    +       I       
Sbjct: 229 AEPGEVLGAGGRVLNMVDLSD-VYMTFFLPTEAAGKAALGSDVHIILDAAPHIVIPAKTT 287

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +  +     +  + +N + +  + V  +I+      +   ++ G P      
Sbjct: 288 YVASVAQFTPKTVETDNERLKLMFRVRARISPELLEKHLEYVKTGLPGRAYIR 340


>gi|207725064|ref|YP_002255461.1| abc transporter related protein [Ralstonia solanacearum MolK2]
 gi|206590294|emb|CAQ37255.1| abc transporter related protein [Ralstonia solanacearum MolK2]
          Length = 439

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 86/276 (31%), Gaps = 35/276 (12%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               ++    I+S+     +   +             +    +  L++ Q+     + L+
Sbjct: 87  ELRRQLREAEIASIQAQQALSAAQQIESSTEYQAAARRLLAAQNSLAAAQRRGREAQMLY 146

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           EK  +++ +L   ++ +     ++     E   +                  LK     L
Sbjct: 147 EKGIIARTELEAGKQEIDAGQSQVDGARDEIATL-----------------RLKRAPAAL 189

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV-----------YNQSFSSSNYAQQS 315
              +    +   +L  L    +  T+LSPI+G ++             +  ++       
Sbjct: 190 RVLELDLENRQLRLEELRAKLKATTMLSPISGVVLYPEPTDGNEPSGRKELNAGAAVTPK 249

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--- 372
             ++  V  +    I+  V  + I+ V  G    +      D     F   ++++     
Sbjct: 250 DVILT-VGDTSAFLIKTWVDEEDIRRVAPGQAVRIVLAADGDQ---AFAGTVQRVSSQAK 305

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
               +    +    +EV + +   A +  N  LR G
Sbjct: 306 AADGRGQGSRGTSEFEVQILLKPPADAGTNKTLRVG 341



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 51/155 (32%), Gaps = 12/155 (7%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS----------IKNLRC 108
           I +P  G++    V+ G  +  G  L    D E    +   +++           + +  
Sbjct: 55  IAAPVEGVLLAKFVQFGDTVTAGQKLAQVNDTELRRQLREAEIASIQAQQALSAAQQIES 114

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             + + +A   L  +  +       RE Q+L   G    T  +     I +    +    
Sbjct: 115 STEYQAAARRLLAAQNSLAAAQRRGREAQMLYEKGIIARTELEAGKQEIDAGQSQVDGAR 174

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             + ++ L R        +L   L + Q  L  ++
Sbjct: 175 DEIATLRLKRAPAA--LRVLELDLENRQLRLEELR 207


>gi|149279612|ref|ZP_01885741.1| membrane fusion efflux protein, putative [Pedobacter sp. BAL39]
 gi|149229648|gb|EDM35038.1| membrane fusion efflux protein, putative [Pedobacter sp. BAL39]
          Length = 452

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 93/308 (30%), Gaps = 21/308 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            +EKA + +  + +   GK         +  +S     L +K   +  +   +L  + + 
Sbjct: 35  TVEKASDKKVTETVTASGKIQPETEVKLSSEVSGEVTELLVKEGDV--VKKGQLLCKVRP 92

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHI 244
            +L++         +  K        S   + +Q E     +    + N+      +   
Sbjct: 93  DVLKSGYDRAVASYSSQKA----GVASATQILRQNEANFVNAEATYKRNVELFGKKVISA 148

Query: 245 NE--LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
           +E      A L     L +   DL  ++       + +        + TI +P+ G I  
Sbjct: 149 SEFDAAKAAYLTAKTNLAKSKEDLISSKFMLEQSGANVQEANANLAKATIFAPVDGVISK 208

Query: 303 NQS----FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
                              +M+I  +     +   V    I  V  G +A +    +AD 
Sbjct: 209 LSVELGDRILGTAQMAGTEIMRIS-NLSSMEVNVDVNENDINRVNVGDSAVIEVDAFADK 267

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI-------TDLAFSDNNIELRNGFPA 411
           + K     I      I     ++     + V ++I             D     R G  A
Sbjct: 268 KFKGIVTEIASSSKDIGTTTTSVDQVTNFVVKVRILADSYENIKGGAKDLPSPFRPGLSA 327

Query: 412 EVLFTAKN 419
            V   +++
Sbjct: 328 TVDIQSES 335



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 90/263 (34%), Gaps = 8/263 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +  +V++SG+I  E  V  + S  SG + +  V+ G  + +G  L            D 
Sbjct: 43  KVTETVTASGKIQPETEVK-LSSEVSGEVTELLVKEGDVVKKGQLLCKVRPDVLKSGYDR 101

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYG 156
              S  + +  + +    L      +   E  ++   E     +            +   
Sbjct: 102 AVASYSSQKAGVASATQILRQNEANFVNAEATYKRNVELFGKKVISASEFDAAKAAYLTA 161

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN----AVS 212
            +++ +S +  ++    +  +  +++  ++ L         D  + K   E        +
Sbjct: 162 KTNLAKSKEDLISSKFMLEQSGANVQEANANLAKATIFAPVDGVISKLSVELGDRILGTA 221

Query: 213 QNDLNQQERIVYKSTLELRENIHEQK-NMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           Q    +  RI   S++E+  +++E   N +   +    E +       K I  ++  + +
Sbjct: 222 QMAGTEIMRISNLSSMEVNVDVNENDINRVNVGDSAVIEVDAFADKKFKGIVTEIASSSK 281

Query: 272 TFADEMSKLTILEKTREQKTILS 294
                 + +  +     +  IL+
Sbjct: 282 DIGTTTTSVDQVTNFVVKVRILA 304


>gi|116749661|ref|YP_846348.1| multidrug resistance efflux pump-like [Syntrophobacter fumaroxidans
           MPOB]
 gi|116698725|gb|ABK17913.1| Multidrug resistance efflux pump-like [Syntrophobacter fumaroxidans
           MPOB]
          Length = 325

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 90/251 (35%), Gaps = 11/251 (4%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   +++V       + +   +   RL  E    L R L  S   ++       +KN  S
Sbjct: 69  FRGIVTTVKVHAAQAVKKGEVLARYRLGAEVIMQLRRRLSPSQISEMGTQLAEIDKNLSS 128

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
                ++ R +    +   +++++ +  +    +L     +   + L+   +    +   
Sbjct: 129 LEVRRKELRELSSRNMAPAQSLNQVEKEI----QLASRHRVSIESRLRLEQQLARDDLLV 184

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQ-SFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             +++ +        E+ ++++PI G ++                P   IV       +R
Sbjct: 185 LKEQLGQAVNASSIPEEVSLVAPIDGYVIAVSPDLREGAEVGPGTP-AFIVGAMDPMVMR 243

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           ++V      HV  G  A+V    +  I  K F+  + ++    S     L+   YYE+ +
Sbjct: 244 SQVHEMDAIHVAVGDKASV---SFDSIPGKTFEGKVSRLS--WSPAGAALEQPSYYEMEV 298

Query: 392 KITDLAFSDNN 402
            + +   +  +
Sbjct: 299 LLPNPDLALKD 309



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 11/146 (7%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G+++       +  PF GI+   +V     + +G  L             L    I  L
Sbjct: 54  QGKLMCPLKRQ-VAVPFRGIVTTVKVHAAQAVKKGEVLAR---------YRLGAEVIMQL 103

Query: 107 RCHID-TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           R  +  ++ S +     + D    + E R ++L +   +  +    +          S  
Sbjct: 104 RRRLSPSQISEMGTQLAEIDKNLSSLEVRRKELRELSSRNMAPAQSLNQVEKEIQLASRH 163

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRAL 191
                 R     +L  ++   L   L
Sbjct: 164 RVSIESRLRLEQQLARDDLLVLKEQL 189


>gi|119773647|ref|YP_926387.1| hypothetical protein Sama_0507 [Shewanella amazonensis SB2B]
 gi|119766147|gb|ABL98717.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 349

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 91/241 (37%), Gaps = 15/241 (6%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + NL+R        + L  II  + L+ W +L P  + + + G  +     +E++SP SG
Sbjct: 24  YDNLRRGAYRGRWYLLLALIIAPVLLVIWFVLKPW-LFILAPG--IVTSEPLEMRSPASG 80

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++       G  +  G PLL  +D      I   +  +  ++   D        +  K  
Sbjct: 81  VVHAVYQTRGDVVSTGQPLLVLKDPALDAQIQGLERQLTQMQQFRDLGAEISAQIGEKIR 140

Query: 126 VLEKAFESREEQLLDFLG-KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           V E+    ++E L  F   +            +   + S KM L + R+  ++ L  + +
Sbjct: 141 VAEEGMIRQDELLSQFEKFRAKGVVPTADMAAVLQAHTSAKMALEQARAELVSELQRQQE 200

Query: 185 SSLLRALLSSHQK---DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +     +  S Q+   +L+ +K L E+                    +++  + EQ  + 
Sbjct: 201 ARQAGVVTQSRQRMELELSRLKALREQ--------LTIRAPYDARIADIQVQVGEQLAVE 252

Query: 242 R 242
           R
Sbjct: 253 R 253



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 99/285 (34%), Gaps = 18/285 (6%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           + L+           V+      V     + + +  ++      LE + + ++       
Sbjct: 70  EPLEMRSPASGVVHAVYQTRGDVVSTGQPLLVLKDPALDAQIQGLERQLTQMQQFRDLGA 129

Query: 197 K---DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           +    +     + E+  + Q++L  Q        +    ++              ++A  
Sbjct: 130 EISAQIGEKIRVAEEGMIRQDELLSQFEKFRAKGVVPTADMAAVLQAHTSAKMALEQARA 189

Query: 254 EFANYLKEISRDLE-----QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           E  + L+      +     Q+++    E+S+L  L   REQ TI +P    I   Q    
Sbjct: 190 ELVSELQRQQEARQAGVVTQSRQRMELELSRLKAL---REQLTIRAPYDARIADIQV-QV 245

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                  +PL+ +   +    + A + PK + +V  G  A++  P+  +    + +   E
Sbjct: 246 GEQLAVERPLLWLSGRASPVVV-AYLEPKYLDYVDLGQQASITLPN-GESFNGRIEEPTE 303

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            +  +  Q   +   ++   + + +T L      +E   G P EV
Sbjct: 304 LVSKLPKQLSGSFDGEKP-VLKVTLTPLEPLSLAVE---GVPVEV 344


>gi|317491734|ref|ZP_07950169.1| efflux pump membrane protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920168|gb|EFV41492.1| efflux pump membrane protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 383

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 88/268 (32%), Gaps = 27/268 (10%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +   L +LD  + +       S+  + +  ++ L+  + + ++++++ +    +S  +L 
Sbjct: 80  KGDVLIQLDSTDATLAYNKAKSNLSETVRKVRQLYINSRLDKDNIDKAKIAYKQSLTDLN 139

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ--------------NQRTFADEM 277
             +     +    +E    A  +  +    ++  L++              NQ +  +  
Sbjct: 140 R-LSRLTGVAAVAHETLQHAKNQVVSNKISLNIALQEYKSNQALLLDTNFINQPSIQNAA 198

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
             +     T ++  I SP+ G +               Q LM IVP     ++ A     
Sbjct: 199 DAVREAWMTLQRTRIKSPVTGYVAQRSVN-VGENISVGQSLMAIVPMD-QFWLNANFKET 256

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--------DPIISQQDNNLQTQEYYEV 389
           Q+  V+ G    V F          +   +  I          + +Q  +    +    V
Sbjct: 257 QLSRVRIGQK--VNFTTDIYGDSVVYTGYVAGINMGTGSAFSLLPAQNASGNWIKIVQRV 314

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +KI        N  LR G  A V    
Sbjct: 315 PVKIMVDIDQLENHPLRIGLSANVKVKT 342



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 62/187 (33%), Gaps = 10/187 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN--LRCH 109
              N V I S  +  +      N   + +G  L+  +  + T   +  K ++     +  
Sbjct: 52  VSGNKVLISSQVASSVVSINYTNTDLVKKGDVLIQLDSTDATLAYNKAKSNLSETVRKVR 111

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR---SLKM 166
                S LD  N     +       +   L  L    +   +   +  + V     SL +
Sbjct: 112 QLYINSRLDKDNIDKAKIAYKQSLTDLNRLSRLTGVAAVAHETLQHAKNQVVSNKISLNI 171

Query: 167 KLTRMRSIYLNRLDLE--NKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQER 221
            L   +S     LD    N+ S+  A  +  +  +T+ +   +      V+Q  +N  E 
Sbjct: 172 ALQEYKSNQALLLDTNFINQPSIQNAADAVREAWMTLQRTRIKSPVTGYVAQRSVNVGEN 231

Query: 222 IVYKSTL 228
           I    +L
Sbjct: 232 ISVGQSL 238


>gi|312131363|ref|YP_003998703.1| efflux transporter, rnd family, mfp subunit [Leadbetterella
           byssophila DSM 17132]
 gi|311907909|gb|ADQ18350.1| efflux transporter, RND family, MFP subunit [Leadbetterella
           byssophila DSM 17132]
          Length = 338

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 71/213 (33%), Gaps = 17/213 (7%)

Query: 210 AVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            V +    +  +++ +  L E+   +++ +         ++    +           L  
Sbjct: 70  HVEEGQYVKAGQLLAELDLSEIDAQVNQAQIGYEKAKRDFERVE-KLFQDQAATRTLLND 128

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +         L   +   +   I +P++G I+  +            P+  +    +  
Sbjct: 129 AKSGLDIAQQTLDAAKFNLKLSKIYAPVSGRIL-MKLAEQGELIAPLHPMFIMGSGEQAY 187

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            ++  +T + +  V     A +R   Y    E+ F   + +I  +I+           YE
Sbjct: 188 TVKVGLTDRDLVKVAPRDPAEIRLDAYP---EEVFTGKVRQIAQMITPTTGT------YE 238

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           V + +  +     N  L +GF A V    KN T
Sbjct: 239 VEIDLAPV-----NKRLVSGFVARVNIKTKNMT 266



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 34/93 (36%), Gaps = 1/93 (1%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT-EKSALDFLN 121
             G+IK+  VE G  +  G  L   +  E    ++  ++  +  +   +  EK   D   
Sbjct: 62  TGGVIKRCHVEEGQYVKAGQLLAELDLSEIDAQVNQAQIGYEKAKRDFERVEKLFQDQAA 121

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +  + +        Q      K++   SK++ 
Sbjct: 122 TRTLLNDAKSGLDIAQQTLDAAKFNLKLSKIYA 154


>gi|325983727|ref|YP_004296128.1| efflux transporter, RND family, MFP subunit [Nitrosomonas sp.
           AL212]
 gi|325533246|gb|ADZ27966.1| efflux transporter, RND family, MFP subunit [Nitrosomonas sp.
           AL212]
          Length = 511

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 67/205 (32%), Gaps = 19/205 (9%)

Query: 217 NQQERIVYKSTLELRENIHEQKNML--RHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + +  V K  + L +  +E++  L    I+   +    +      EI+  L   +    
Sbjct: 247 LRSQYFVAKKRIALAKTTYEREKQLWEEKISAKQEFLLAQELWNEAEIALKLASVKLRAL 306

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
               +   L+       I +PI+G I+  ++ +     ++ + +  I       +    V
Sbjct: 307 GVQPESNHLKNNYTHYEIRAPISGIIIA-RAIAVGEALKEDREIYTIA-DVSTVWTAVTV 364

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
            PK +  ++ G    V+   Y      + +  +  I  +I  Q             +++ 
Sbjct: 365 YPKDLNVIRLGQKVAVKATAYD----VESEGTVTYISTLIGGQTRTAT------ARVELD 414

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
                +   + R G        A+ 
Sbjct: 415 -----NKEGKWRPGMFLNAELVAEE 434


>gi|194367461|ref|YP_002030071.1| RND family efflux transporter MFP subunit [Stenotrophomonas
           maltophilia R551-3]
 gi|194350265|gb|ACF53388.1| efflux transporter, RND family, MFP subunit [Stenotrophomonas
           maltophilia R551-3]
          Length = 414

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 61/200 (30%), Gaps = 14/200 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +     G +       G ++ +G  L   +        D    S 
Sbjct: 67  ASALGTVTA-MNTVTVSPQVGGQLMSLNFREGQEVKKGDVLAVIDPRTAQASYDQAVASK 125

Query: 104 KNLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +     + T +S     N       V +   +++  Q+  +     +  + + +  +   
Sbjct: 126 RQNEALLATARSNYQRSNAPEYRQFVAKTDLDTQRNQVAQYESAVAANEASMRSAQVQLQ 185

Query: 161 YRSLKMKLTRMRSIYLNRLD----------LENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           Y  +   +T +  I                   +   +  L +  ++ L  ++      A
Sbjct: 186 YTKVTAPITGIAGIRAVDAGNVVNAGTALVTLTQIHPIHVLFNLPERQLGDVRQAQAAGA 245

Query: 211 VSQNDLNQQERIVYKSTLEL 230
           V    L++ +  V     +L
Sbjct: 246 VPVAALDRADSHVLSGDGKL 265



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 55/169 (32%), Gaps = 11/169 (6%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANL-EFANYLKEI-----SRDLEQNQRTFA 274
           R    S  +   +  + + +L      Y  +N  E+  ++ +         + Q +   A
Sbjct: 112 RTAQASYDQAVASKRQNEALLATARSNYQRSNAPEYRQFVAKTDLDTQRNQVAQYESAVA 171

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              + +   +   +   + +PI G I   ++  + N       L+ +       ++   +
Sbjct: 172 ANEASMRSAQVQLQYTKVTAPITG-IAGIRAVDAGNVVNAGTALVTLT-QIHPIHVLFNL 229

Query: 335 TPKQIQHVKKGYTA-TVRFPHYADIREKKF--KAIIEKIDPIISQQDNN 380
             +Q+  V++   A  V                  ++ +D +IS     
Sbjct: 230 PERQLGDVRQAQAAGAVPVAALDRADSHVLSGDGKLDVVDNLISADSGT 278


>gi|330957400|gb|EGH57660.1| HlyD family secretion protein [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 388

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 70/188 (37%), Gaps = 7/188 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V  G Q+  G  L T +D      ++  K  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVREGQQVKAGELLATLDDRSIRASLEQAKAQL 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +D   + LD    +    +     +       L K     ++     I+S    
Sbjct: 114 AQSKAQLDV--AQLDLKRYRQLTEDNGISRQTFDQQQALVKQLGATAQGNEASINSAQVQ 171

Query: 164 LKMKLTRMRSIYLNRLDLEN--KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           L    T++RS    R+ + N  + + LR   +     +T +  +  + ++ Q  L   + 
Sbjct: 172 LS--YTQIRSPVTGRVGIRNVDEGNFLRVSDAQGLFSVTQIDPIAVEFSLPQQMLPTLQG 229

Query: 222 IVYKSTLE 229
           +V + T  
Sbjct: 230 LVAEHTAA 237



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 80/252 (31%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L  +       +   E +       +R ++ + K  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVREG----QQVKAGELLATLDDRSIRASLEQAKAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-----EISRDLEQNQRTFADEM--------SKLTILEKTREQKTIL 293
             D A L+   Y +      ISR     Q+    ++        + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTEDNGISRQTFDQQQALVKQLGATAQGNEASINSAQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P     V +   A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDAQGLFSVTQIDPIAVEFSLPQQMLPTLQGLVAEHTAA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            V+              +  +  ID  +S     ++ + +++           +   +L 
Sbjct: 238 AVKAYQGDGAANGLLLGEGTLSLIDNQVSATTGTIRAKAHFK-----------NPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|322831222|ref|YP_004211249.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
 gi|321166423|gb|ADW72122.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
          Length = 324

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 103/362 (28%), Gaps = 88/362 (24%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             +   V + S   G + +  VE G  +  G  L+T +  E    +   + +    +  +
Sbjct: 34  EVDAPEVIVASKAKGRVIERHVERGDDVKAGQLLITLDSPELMAQLRAAEAARDQAKAQL 93

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           D                                          N       R+LK  L +
Sbjct: 94  DL---------------------------------------SVNGTREESIRNLKASLAQ 114

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            ++ Y+N  DL N+++ +                   K  +S +DL    R    +    
Sbjct: 115 SQAEYINARDLYNRNAQV-----------------ATKGFISASDLEDSRRARDSAY--- 154

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           ++ +  + N+   +N    E    +A  L++   DL + +    D               
Sbjct: 155 QQVLVAKANLDEGVNGDRVEQRESYAAQLRQAEEDLLEVKAQTDDL-------------- 200

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTAT 349
            + +P+ G +              S PL+ +V      ++      + I   V+KG    
Sbjct: 201 QVKAPVDGEVGPVPV-EVGELQNASSPLLTLVRLPDAYFV--FNLREDILAGVRKGDKVQ 257

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +R P   +      +A +  I P+                     D       + L    
Sbjct: 258 MRVPALNNQ---MIEAEVRYIAPLGDYATK--------RATRATGDFDLKTFEVRLYPAK 306

Query: 410 PA 411
           P 
Sbjct: 307 PV 308


>gi|301057560|ref|ZP_07198640.1| efflux transporter, RND family, MFP subunit [delta proteobacterium
           NaphS2]
 gi|300448284|gb|EFK11969.1| efflux transporter, RND family, MFP subunit [delta proteobacterium
           NaphS2]
          Length = 403

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 78/221 (35%), Gaps = 26/221 (11%)

Query: 212 SQNDLNQQERIVYKSTLELR---ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           ++ DL   E  + K+  +L          + +L+       E +   A+ L +    L+ 
Sbjct: 115 AKADLVVAEANLAKAASDLGNADREFERTRKLLKRGIASDSEFDALKADRLAK-EAQLQV 173

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAG----TIVYNQSFSSSNYAQQSQPLMKIVPH 324
            +       S L   +       I++  +G     +V  + +        +QPL+ IV  
Sbjct: 174 ARAQVTKAASSLETAKIRLGYTRIMASWSGGEGDRLVAERYYDEGQTVAANQPLLLIVEL 233

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
             +  +   VT K   +++ G T ++    Y D     F   IE+I PI  +     +  
Sbjct: 234 DPILGV-VHVTEKDYAYLRPGQTVSLTTDAYGDS---AFFGRIERIAPIFQKTTRQARV- 288

Query: 385 EYYEVILKITDLAFSDNNIELRNGF---PAEVLFTAKNTTL 422
                     ++   +    L+ G     A VL   + TT+
Sbjct: 289 ----------EMIIENPGHRLKPGMFMRAAVVLKKVRETTI 319



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 38/115 (33%), Gaps = 1/115 (0%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG +    +   +    SG I+K  V+    + QG  +   ++ E    +   K  +   
Sbjct: 64  SGTLEPLAD-FVVAPKVSGRIEKLLVDIADTVTQGQVVGQLDNAEYVQAVTQAKADLVVA 122

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
             ++    S L   + +++   K  +       +F        +K     ++   
Sbjct: 123 EANLAKAASDLGNADREFERTRKLLKRGIASDSEFDALKADRLAKEAQLQVARAQ 177


>gi|94310678|ref|YP_583888.1| hypothetical protein Rmet_1740 [Cupriavidus metallidurans CH34]
 gi|93354530|gb|ABF08619.1| putative membrane protein [Cupriavidus metallidurans CH34]
          Length = 443

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 51/325 (15%), Positives = 106/325 (32%), Gaps = 24/325 (7%)

Query: 2   HHFMWKNLKRNHP-ASLKRMT-LLSIIGIIGLITWSILLPI--EISVSSSGEILNEDNVV 57
           HH      +   P   L R+   L+  G++  I W +L  +   I   SS   +    V 
Sbjct: 23  HHDSLMQRRAGVPGLPLWRVVPRLASYGMVVFIIWVVLSVMFPYIFTRSSERAIVNSPVT 82

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTF-EDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
            + +P  G++ K  V  G     G PL+          L+        + +  ++  K  
Sbjct: 83  LVTTPVEGVVTKQVVTVGGSFKAGDPLMALQNPNMDRALLVELTGKQLDNQKRLEAAKVK 142

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           L+           A ++R       + +Y ++  +     +    R ++ +L   +    
Sbjct: 143 LE-----------ADQTRMASTGGDIKRYQASADREHASRV----RGIEARLAVAKQQID 187

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI-- 234
            + D+ N++  ++   +  Q      +N     A S++ +  +      S+   R  +  
Sbjct: 188 AQEDVVNRNQAMQWAGAVSQAYTDASRNQLTVLAGSRDAIQAELDSARNSSEAARSKVFS 247

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                 L  +++  DE   E      EI   LEQ        ++      +      I +
Sbjct: 248 SSADGALGALSQKQDELKAEITQTQAEI-TQLEQYGAEVDKLVTAEQERLERVSNLDIKA 306

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLM 319
             +G +    +            LM
Sbjct: 307 YASGIVEDVLT-PPGTRVAAGATLM 330


>gi|320661295|gb|EFX28719.1| Inner membrane protein yibH [Escherichia coli O55:H7 str. USDA
           5905]
          Length = 378

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEITDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 347


>gi|322419324|ref|YP_004198547.1| RND family efflux transporter MFP subunit [Geobacter sp. M18]
 gi|320125711|gb|ADW13271.1| efflux transporter, RND family, MFP subunit [Geobacter sp. M18]
          Length = 430

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 64/216 (29%), Gaps = 22/216 (10%)

Query: 210 AVSQNDLNQQERIVYKSTLELRE--NIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             +Q  + Q +    ++   L     + +            D A       LK    +  
Sbjct: 132 VAAQAQVLQMQATSAEARAALARYRQVAQLSGGKVPSKAELDTAEAN----LKRAEANEA 187

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP---LMKIVPH 324
             +       + L   +    + +I SPI G ++  +S         S     L  +   
Sbjct: 188 NARAAVTQAQANLQSDQTNLAKASIQSPINGVVLK-RSVEPGQTVAASFTAPVLFTLAED 246

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                ++  V    +  VK G  A      Y   +   F A+I ++      ++N     
Sbjct: 247 LSKMELQVDVDEADVGQVKVGQKAVFTVDAYPGRK---FDAVITRVSYGSQTKNN----- 298

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               V+  +T L   + ++ LR G       T    
Sbjct: 299 ----VVSYLTVLQVENADLSLRPGMTGSAEITTVTR 330



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 22/166 (13%), Positives = 66/166 (39%), Gaps = 10/166 (6%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS++G +   + V ++ S  SGI+ +  V++  ++ +G  L   +  +  D +   + S+
Sbjct: 73  VSATGNLQPTNQV-DVGSELSGIVDRVLVDDNDRVRKGQLLALLDLSKLKDAVVKSRASL 131

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +   ++             +A  +R  Q+    G    + ++  +   +++ R+
Sbjct: 132 VAAQAQVLQMQATSAE--------ARAALARYRQVAQLSGGKVPSKAE-LDTAEANLKRA 182

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
              +     ++   + +L++  + L         +  ++K   E  
Sbjct: 183 EANEANARAAVTQAQANLQSDQTNLAKASIQSPINGVVLKRSVEPG 228


>gi|193215028|ref|YP_001996227.1| putative ABC transport system, lipoprotein [Chloroherpeton
           thalassium ATCC 35110]
 gi|193088505|gb|ACF13780.1| putative ABC transport system, lipoprotein [Chloroherpeton
           thalassium ATCC 35110]
          Length = 297

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 84/248 (33%), Gaps = 33/248 (13%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            + L R +L  +   L A +SS   ++ +++     +   +      ER+V    +  ++
Sbjct: 73  QLSLKRRELAMRRQSLSAQISSVLSEIAVLEEEKSISEKERERY---ERLVTDKAVPTKQ 129

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + +  + +    +       + AN L ++               +++  L+    +  I
Sbjct: 130 -LDDINDKIAVTEKRIRATETQNANILGQVRA-----------MDAQIAQLDDQIRRCVI 177

Query: 293 LSPIAGTIVYNQS--FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            +PI G ++   +     +   +    +  +       ++R  V+   +  VK G    V
Sbjct: 178 RNPIDGVVLTKYAEPHELTAVGKPLYKIADL----NTMFLRVYVSGDMLPKVKIGQKVEV 233

Query: 351 RFPHYADIREKKFKAIIEKIDPIIS-----QQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
                 D   +     +  I   +       Q  + +    Y V +K+       N+  L
Sbjct: 234 LIDK-TDTENQALAGEVSWISDKVEFTPKIIQTKDERVSMVYAVKIKL------QNDGSL 286

Query: 406 RNGFPAEV 413
           + G P E 
Sbjct: 287 KIGMPGEA 294


>gi|114797172|ref|YP_761736.1| RND family efflux transporter MFP subunit [Hyphomonas neptunium
           ATCC 15444]
 gi|114737346|gb|ABI75471.1| efflux transporter, RND family, MFP subunit [Hyphomonas neptunium
           ATCC 15444]
          Length = 422

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 25/233 (10%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           + A S+  + +   IV  +   L   I E +   + +  L     L  A+ L      L 
Sbjct: 103 EAADSELGVVRARSIVATAEQALAREIAEAELAQQDLENL----GLTDASPLARREPQLA 158

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +       ++L+  E +  +  I++P  G +   +S     +    Q L  I      
Sbjct: 159 EARAALESAKAQLSEAELSLSRTAIIAPFDGRVRE-RSADIGQFVSPGQSLGNIFATD-- 215

Query: 328 TYIRAKVTPKQIQHVKKGYTA-----------TVRFPHYADIREKKFKAIIEKIDPIISQ 376
             +   +  K     + G               V F      + + +   + +    I+ 
Sbjct: 216 -VVEVALPLKDADLGQLGLPIAFSSSADEPGPKVEFSAVVGGKPRTWVGEVVRTGAAINS 274

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
           Q   +         LK      +D+   +  G         +  TL   +I P
Sbjct: 275 QTRQINVF----AELKDPFGTGADDGAPMAPGLFVTARIEGE--TLDNVLIAP 321



 Score = 39.6 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 47/135 (34%), Gaps = 11/135 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE----NGSQILQGTPLLTFEDIETTDL 95
           + I+V + GE+  +  +  +    +G +    V     +G  I +G  L+  E  ++   
Sbjct: 54  LTITVEAQGEVSPKREI-IVAPQIAGRVS--YVSPDFIDGGFIRRGQVLVRVEAADSELG 110

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL----EKAFESREEQLLDFLGKYHSTCSK 151
           +   +  +      +  E +  +      + L          RE QL +      S  ++
Sbjct: 111 VVRARSIVATAEQALAREIAEAELAQQDLENLGLTDASPLARREPQLAEARAALESAKAQ 170

Query: 152 VFNYGISSVYRSLKM 166
           +    +S    ++  
Sbjct: 171 LSEAELSLSRTAIIA 185


>gi|90411400|ref|ZP_01219411.1| hypothetical protein P3TCK_12246 [Photobacterium profundum 3TCK]
 gi|90327613|gb|EAS43956.1| hypothetical protein P3TCK_12246 [Photobacterium profundum 3TCK]
          Length = 380

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 83/219 (37%), Gaps = 16/219 (7%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFANYLKEISRD---LEQN 269
             L Q    +  S  +L  +  +  N+ R + N++  +   ++     ++ ++   L+Q 
Sbjct: 95  QRLTQAITELMSSQAQLESSKQKLANLERLVKNQVIPKNYGDYIQAKADVRQNNANLQQK 154

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVP 323
           Q+      S  + + +++   TI++PI GT++                 Q +  +M +  
Sbjct: 155 QQNLDLIRSGESSVGESKLTSTIVAPITGTVLSLNV-EVGEPIISTESSQSATQMMSLAN 213

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDPIISQQDNNLQ 382
            +     +  V+      +  G   T+    Y +I        +  + + + S Q+    
Sbjct: 214 MND-MIFKGSVSEHDAAQLHVGMPVTMTLAPYPEIEITGVLSKVAVQSEKLNSAQETTTT 272

Query: 383 TQEYYE--VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            Q  ++    +++  + F    + +R+GF A    T K 
Sbjct: 273 AQRSFDNGFQVEVNKIQF-PEGLTIRSGFSATAQITLKK 310



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 84/254 (33%), Gaps = 19/254 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  IE    + G+I+   +V  IKS   GI+ +     G ++  GTPL+      T  
Sbjct: 37  AEIGTIEKQAIAVGQIVPAHSVQ-IKSQIEGIVGEIFHHVGEEVKAGTPLIKIRPNPTPQ 95

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +      + + +  +++ K  L  L    K  V+ K +    +   D      +   K 
Sbjct: 96  RLTQAITELMSSQAQLESSKQKLANLERLVKNQVIPKNYGDYIQAKADVRQNNANLQQKQ 155

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMK 203
            N  +     S   +     +I                E   S   +  ++    L  M 
Sbjct: 156 QNLDLIRSGESSVGESKLTSTIVAPITGTVLSLNVEVGEPIISTESSQSATQMMSLANMN 215

Query: 204 NLFEKNAVSQNDLNQQE-------RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++  K +VS++D  Q          +     +E+   + +       +N   +       
Sbjct: 216 DMIFKGSVSEHDAAQLHVGMPVTMTLAPYPEIEITGVLSKVAVQSEKLNSAQETTTTAQR 275

Query: 257 NYLKEISRDLEQNQ 270
           ++      ++ + Q
Sbjct: 276 SFDNGFQVEVNKIQ 289


>gi|313107240|ref|ZP_07793438.1| hypothetical protein PA39016_000890007 [Pseudomonas aeruginosa
           39016]
 gi|310879940|gb|EFQ38534.1| hypothetical protein PA39016_000890007 [Pseudomonas aeruginosa
           39016]
          Length = 425

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/390 (13%), Positives = 114/390 (29%), Gaps = 90/390 (23%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P+   +   G +     VV + +PF+G ++   VE G ++ +G  LL  +  E    + 
Sbjct: 50  APLVHQIGLVGRLEP-GRVVTLAAPFAGNVEALLVEPGQRVAEGQELLRMDTREIAVQVR 108

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   R  +   +                                           
Sbjct: 109 EAQSALLKARRTLQDLRDW----------------------------------------- 127

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                 +      +RS  L +   E K    R L          + +L ++ +  + DL 
Sbjct: 128 -ERGEDMARVRRALRSAQLAQSSTERKLRETRELFQRGIVPRNELDDLEQQASQQRMDLE 186

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
              R V  +  + +    +   M                        DL      +    
Sbjct: 187 AARREVESTRAKGQGENRQIAEM------------------------DLANASVKYETLQ 222

Query: 278 SKLTILEKTREQKTILSPIAGTIVYN----------QSFSSSNYAQQSQPLMKIVPHSKL 327
           ++L         +T+ +P AG +V            +   + +   Q Q L  +    + 
Sbjct: 223 AQLDG-------RTVRAPFAGIVVAAPGLAGEQGSREPVQAGSKLGQGQALFGLA-SVER 274

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + AKV+   I  +++G    +    +        + +I  +            + ++ 
Sbjct: 275 LKVSAKVSELDINQLREGQAVEISGDGFEGTT---LEGVIAALGGQALPGMAQGGSPQF- 330

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           EV + +  L       ++R G  A++  T 
Sbjct: 331 EVTVSVAPLDPRQLQ-KIRLGMSAKLTVTT 359


>gi|307245221|ref|ZP_07527312.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307254168|ref|ZP_07536013.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258631|ref|ZP_07540366.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306853865|gb|EFM86079.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306862868|gb|EFM94817.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306867288|gb|EFM99141.1| Efflux transporter, RND family, MFP subunit [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 393

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 55/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+  V ++G +       E+ +  SG I    V  G Q+ +G  L   +    ++ +   
Sbjct: 44  IDKHVLATGSVRAS-KRTEVGAQVSGKIINLYVTLGQQVKKGDLLAEIDSSNQSNSLSTA 102

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++ + +  + + + AL+   + ++ L K ++ +     DF    ++  S      + +
Sbjct: 103 EATLSSYQAQLKSAQVALEVAQSNFNRLNKLYKQQSASQSDFETAKNTLASA--RATVDN 160

Query: 160 VYRSLKMKLTRMRSIYLN 177
           V   +K     +     N
Sbjct: 161 VKAQIKSAQISVNDAKTN 178



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 82/230 (35%), Gaps = 25/230 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLR---HINELYDEANLEFANYLKEISRDLEQNQ 270
           N L+  E  +     +L+      +        +N+LY + +   +++ +     L   +
Sbjct: 97  NSLSTAEATLSSYQAQLKSAQVALEVAQSNFNRLNKLYKQQSASQSDF-ETAKNTLASAR 155

Query: 271 RTFADEMSKLTILE-------KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-- 321
            T  +  +++   +              I+SP+ GTIV     S       +Q    I  
Sbjct: 156 ATVDNVKAQIKSAQISVNDAKTNLNYTQIVSPMDGTIVSIPV-SVGQTVNANQTSPTIIH 214

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V       ++ +++   I  VK G    +RF   A+       + I+ +DP ++   ++ 
Sbjct: 215 VADLSKMLVKLEISEGDIAQVKAGQA--IRFTTLAEPNH-THNSKIDSVDPALTTLSDDN 271

Query: 382 QTQEYYEVILKITDLAFSDNNI------ELRNGFPA--EVLFTAKNTTLA 423
            + +Y E       + +  N++       LR G     +V    +   L 
Sbjct: 272 ASNKYAEKSGNTEAIYYYANSLVENSEQRLRIGMTVQGQVDIVKRENVLI 321


>gi|255008395|ref|ZP_05280521.1| ABC transporter permease [Bacteroides fragilis 3_1_12]
 gi|313146118|ref|ZP_07808311.1| ABC transporter permease [Bacteroides fragilis 3_1_12]
 gi|313134885|gb|EFR52245.1| ABC transporter permease [Bacteroides fragilis 3_1_12]
          Length = 415

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 70/202 (34%), Gaps = 25/202 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+   RL L+ +   L   L+  Q+       L +
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQERLQLKQERIGLSKELAVKQRRYDQYSRLIK 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  ++Q D               RE     +  L  ++E   + N+   + +  +  ++ 
Sbjct: 168 EQLIAQEDFRLA-----------REEYEAAQAQLDVVDERIRQDNIFRESQIHSLDENIR 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+ A    +        E   + +PI G +    +          + + +I+     
Sbjct: 217 NMKRSLALVRER-------VENLKVKAPIDGQVGNLDA-QIGQSIAAGEHIGQIITPD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTAT 349
             ++A++    ++ V  G  A 
Sbjct: 267 LKVQAQIDEHYVERVIPGLPAD 288



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/213 (11%), Positives = 73/213 (34%), Gaps = 17/213 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G+++  + ++ + +   G +++   E G+ +  G  +L   +       +++   +
Sbjct: 62  IRVIGQVMP-NRIIYMDAVEGGRVEERLKEEGAIVKAGDVILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++  ++N R  ++ E+  L          E A + R       L K      + F   
Sbjct: 121 AYQENELRNTRISMEQERLQLKQERIGLS-KELAVKQRRYDQYSRLIKEQLIAQEDFRLA 179

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                 +          I  + +  E++   L   + + ++ L +++         + + 
Sbjct: 180 REEYEAAQAQLDVVDERIRQDNIFRESQIHSLDENIRNMKRSLALVRE--------RVEN 231

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            + +  +      L   I +      HI ++  
Sbjct: 232 LKVKAPIDGQVGNLDAQIGQSIAAGEHIGQIIT 264


>gi|261345152|ref|ZP_05972796.1| secretion protein, HlyD family [Providencia rustigianii DSM 4541]
 gi|282566842|gb|EFB72377.1| secretion protein, HlyD family [Providencia rustigianii DSM 4541]
          Length = 323

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 86/283 (30%), Gaps = 37/283 (13%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + LL                        L   L   R   L   DL+   +   +   + 
Sbjct: 65  QLLLTLESPELQAQYAALKAAKDQAQAQLDQSLHGTREETL--RDLQASLAQANSQYQNA 122

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            ++ T + NL  K  VS N+L+   +      +  ++    +  +    N    E   ++
Sbjct: 123 SREFTRLNNLLGKGYVSINELDNARKA---KEVAFQQVQSAKARLEEGKNGDRIELRQQY 179

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              + +  + L + Q    D                + +P+ G +    +          
Sbjct: 180 EAAVNQAQQKLAEIQVQIDDL--------------QVKAPVDGEVGPIPA-EIGELFNAG 224

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-- 372
            PL+ ++   +  ++      + I   VKKG    +  P   D   K  +A +  I P  
Sbjct: 225 SPLLSLISLPQSYFV--YNLREDILVGVKKGNKVQLVIPALGD---KTVEAEVRYIAPKG 279

Query: 373 IISQQDNNLQTQEY----YEVILKITDLAFSDNNIELRNGFPA 411
             + +     T ++    +EV L   +         LR G   
Sbjct: 280 DYATKRATRATGDFDLKTFEVRLYPLEPIDG-----LRPGMSV 317


>gi|56459469|ref|YP_154750.1| HlyD family multidrug efflux protein [Idiomarina loihiensis L2TR]
 gi|56178479|gb|AAV81201.1| Multidrug resistance efflux pump, HlyD family [Idiomarina
           loihiensis L2TR]
          Length = 353

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 83/237 (35%), Gaps = 24/237 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q ++          + +   +     ++       +         + K    +A     
Sbjct: 63  NQYVEEGEPLFKIDPRPYQLQLQQAELAMAQAQQSNQQFDAQIRTAQAKIKSAQATAQEL 122

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            ++   +K+L E  + SQ   ++ +     S LE   N+   ++ L+          L+ 
Sbjct: 123 SREARRIKDLVEDGSSSQQAFDRAQ----SSKLEALANVEAAQSQLQS---------LKV 169

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
               ++ + +L   Q   A E +KL          T+ +  AG +   +  S   YA+Q 
Sbjct: 170 QRGAEDDANNLLIQQAKNAIETAKLN-----LSYTTVRAKHAGRVGNLKL-SEGAYARQG 223

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            PLM +V  +      A    K +++++ G  A V F           +A +E ID 
Sbjct: 224 TPLMALVSPNADII--ADFREKNLRNIESGQQALVVFDAEPGTLY---EAKVESIDA 275



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 86/259 (33%), Gaps = 11/259 (4%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A   +  L+  + +     W+     ++S+  + + +    V ++    +G ++K  V N
Sbjct: 8   ARWVKRALVLFVLVFAYFLWA-----DLSLPLTPQAMVTRVVTQVAPQVNGTVEKVLVNN 62

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G PL   +       + L++  +   +     ++        +  +      ++
Sbjct: 63  NQYVEEGEPLFKIDPRPY--QLQLQQAELAMAQAQQSNQQFDAQIRTAQAKIKSAQATAQ 120

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E   L    +      +  +    +  R+   KL  + ++   +  L++      A   +
Sbjct: 121 E---LSREARRIKDLVEDGSSSQQAFDRAQSSKLEALANVEAAQSQLQSLKVQRGAEDDA 177

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           +   +   KN  E   ++ +               L+ +          +  L       
Sbjct: 178 NNLLIQQAKNAIETAKLNLS-YTTVRAKHAGRVGNLKLSEGAYARQGTPLMALVSPNADI 236

Query: 255 FANYLKEISRDLEQNQRTF 273
            A++ ++  R++E  Q+  
Sbjct: 237 IADFREKNLRNIESGQQAL 255


>gi|307546329|ref|YP_003898808.1| efflux transporter RND family, MFP subunit [Halomonas elongata DSM
           2581]
 gi|307218353|emb|CBV43623.1| efflux transporter, RND family, MFP subunit [Halomonas elongata DSM
           2581]
          Length = 398

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/116 (10%), Positives = 38/116 (32%), Gaps = 3/116 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFL 120
           SG + +     G  + +G  L T +       +   +  ++  R   +   +E +  + L
Sbjct: 80  SGYLDEIHYSEGQTVEKGEVLFTIDPRPYQADLARAEAELERARARAELTRSEAARAETL 139

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                +  +  + R            +  ++V    ++  +  ++  ++      L
Sbjct: 140 AQSRSISREVLDQRRATAAQAEADILAAQAEVERARLNVEFTEVRAPISGRTGRAL 195



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 29/102 (28%), Gaps = 1/102 (0%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            ++ LE      E         E   ++       L +      Q +       +++   
Sbjct: 115 AEAELERARARAELTRSEAARAETLAQSRSISREVLDQRRATAAQAEADILAAQAEVERA 174

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
               E   + +PI+G        +  N    + PL  IV   
Sbjct: 175 RLNVEFTEVRAPISGR-TGRALVTVGNLVSDATPLTSIVSLD 215


>gi|325913979|ref|ZP_08176335.1| multidrug resistance efflux pump [Xanthomonas vesicatoria ATCC
           35937]
 gi|325539748|gb|EGD11388.1| multidrug resistance efflux pump [Xanthomonas vesicatoria ATCC
           35937]
          Length = 397

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/266 (12%), Positives = 85/266 (31%), Gaps = 28/266 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + ++R +Y +    + + S     L S + D    KNL    A+S  +
Sbjct: 99  ALQQAEANLAKTVRQVRGLYRSVEGAQAEVSAREVTLRSARADFARRKNLAASGAISNEE 158

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   +  +    +     +++                      +Q     
Sbjct: 159 LAHAREELAAAEAAVSGSRESFERNRALVDDSDL------------------ASQPDVQT 200

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             +++        +  +++P++G +   +S       Q    LM +VP  +  ++ A   
Sbjct: 201 AAAQVRQAYLNHARTGVVAPVSGYVAR-RSAQVGQRVQPGSVLMAVVPL-EQVWVEANFK 258

Query: 336 PKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----EYY 387
             Q++H++ G    +    Y        + +++ +            N         +  
Sbjct: 259 ETQLKHMRLGQEVELHSDLYGGGVNYTGRIESLGLGTGSAFSLLPAQNASGNWIKIVQRV 318

Query: 388 EVILKITDLAFSDNNIELRNGFPAEV 413
            V + +     +DN + +      +V
Sbjct: 319 PVRIAVDSKQLADNPLRIGLSMKVDV 344



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 65/209 (31%), Gaps = 19/209 (9%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSP 62
                  A+L+ + ++ I+ IIG++TW +L+       + +         + N V+I   
Sbjct: 14  AAPSKRRAALRIVAIVVILAIIGILTWYVLVGRWYEDTDDA-------YVQGNQVQITPM 66

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKS 115
             G +     E+G ++ +G  L+  +         +    +      ++ L   ++  ++
Sbjct: 67  VGGTVVSIGAEDGMRVERGQLLVQLDPADTAVALQQAEANLAKTVRQVRGLYRSVEGAQA 126

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            +             F  R+                      +    S   +        
Sbjct: 127 EVSAREVTLRSARADFARRKNLAASGAISNEELAHAREELAAAEAAVSGSRESFERNRAL 186

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           ++  DL ++  +  A     Q  L   + 
Sbjct: 187 VDDSDLASQPDVQTAAAQVRQAYLNHART 215


>gi|319786978|ref|YP_004146453.1| efflux transporter RND family, MFP subunit [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465490|gb|ADV27222.1| efflux transporter, RND family, MFP subunit [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 381

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 70/178 (39%), Gaps = 10/178 (5%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E+       +   + +V       R  + + + ++R +   Y+ A       L     
Sbjct: 93  LVEEG----QQVRAGQPLVRLDPDRARLAVAQNEALVRKLENNYNRARQLIQQQLISA-G 147

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +++Q +       +   +        T+++PI+G +V ++     N+ Q + P+++IV  
Sbjct: 148 EVDQMRYDLEQARAAYDLARLELSYTTVVAPISG-VVASRDIKPGNFVQINSPIIRIV-D 205

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           S        V  +++  ++ G   T+       +  + F  +++++ P++       +
Sbjct: 206 SSRLEATLNVPEREMAKLRAGQAVTL---AADALPGRSFTGVVDRVSPVVDTGTGTFR 260



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 57/164 (34%), Gaps = 2/164 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  S + +  +        + +  SG+     VE G Q+  G PL+  +       +   
Sbjct: 63  IAASYAGTAALEPRAESQVV-AKTSGVALAVLVEEGQQVRAGQPLVRLDPDRARLAVAQN 121

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  ++ L  + +  +  +         +++     E+    +               IS 
Sbjct: 122 EALVRKLENNYNRARQLIQQQLISAGEVDQMRYDLEQARAAYDLARLELSYTTVVAPISG 181

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           V  S  +K      I    + + + SS L A L+  ++++  ++
Sbjct: 182 VVASRDIKPGNFVQINSPIIRIVD-SSRLEATLNVPEREMAKLR 224


>gi|163784488|ref|ZP_02179358.1| chemiosmotic efflux system B protein B [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880245|gb|EDP73879.1| chemiosmotic efflux system B protein B [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 396

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 32/162 (19%)

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
            ++  L    K  +  T+ SP  G I+    +   +  +  +PL +I    +  ++  KV
Sbjct: 180 QQIENLKKTRKVFKTMTLYSPYDGWIMEKFVY-LGSQVKAGKPLFRIA-KHQNLWLMVKV 237

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             K +  +K+G T  + F  Y        K  I+ + P++  ++          V + I 
Sbjct: 238 YEKDLPFIKEGQTVDIYFDSYPGKVY---KGKIDYLYPMMDFKNRTRD------VRIVID 288

Query: 395 DLAFSDNNIELRNGF----------------PAEVLFTAKNT 420
                + + +L  G                 P   +      
Sbjct: 289 -----NKDYKLLPGMYSKVRVNIPLGEALVLPDTAVINTGKR 325


>gi|332663377|ref|YP_004446165.1| secretion protein HlyD family protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332332191|gb|AEE49292.1| secretion protein HlyD family protein [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 363

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 19/211 (9%)

Query: 20  MTLLSIIGIIGLITWSI-----------LLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           M     +  I L+ W             +  +  +V +SG ++ E     + S   GII 
Sbjct: 1   MKYFCCLLFISLLFWGCGKDKIKETQPEIATLTEAVYASGTLVPESEYR-VMSVSDGIIT 59

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             +++ G Q+  G  L +  +      +   +  +   R         L  L N+    +
Sbjct: 60  AVRIKAGDQVQAGALLFSLSNANLNANVAAAQQLLDKTRPLTTDAAPQLRELRNRLQSAQ 119

Query: 129 K--AFESREEQLLDFLGKYHSTCSKVFNYGI---SSVYRSLKMKLTRMRSIYLNRLDLEN 183
               F+S + Q    L    +   + F        S  R +     ++R + LN   L+ 
Sbjct: 120 AKMRFDSLQHQRFSSLMASEAISQREFEQAQLQYESSQREVSALQQQVRQVNLNSA-LQA 178

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
           + +  +  +++  +  T +K+ F +  V + 
Sbjct: 179 QQAENQLRIANTSQQNTQLKS-FGEGLVYEV 208



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 73/202 (36%), Gaps = 22/202 (10%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR------ENIHEQKNMLRHINELYD 249
           Q+ L   + L    A     L +    +  +  ++R      +               ++
Sbjct: 91  QQLLDKTRPLTTDAA---PQLRELRNRLQSAQAKMRFDSLQHQRFSSLMASEAISQREFE 147

Query: 250 EANLEFANYLKEISRDLEQNQR-------TFADEMSKLTILEKTREQKTILSPIAGTIVY 302
           +A L++ +  +E+S   +Q ++             ++L I   +++   + S   G +  
Sbjct: 148 QAQLQYESSQREVSALQQQVRQVNLNSALQAQQAENQLRIANTSQQNTQLKSFGEGLVYE 207

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
              +   +    +QPL  I   SK    +  +    +  +K G    +    + D     
Sbjct: 208 VFKY-PGDMVYPNQPLAII--GSKNLIAKLMIDETDLGKIKLGQVVLLTMDAFPDQI--- 261

Query: 363 FKAIIEKIDPIISQQDNNLQTQ 384
           F A I +I P++++ + +++  
Sbjct: 262 FHAEITRIYPMLNRVEQSIRVD 283


>gi|153003891|ref|YP_001378216.1| RND family efflux transporter MFP subunit [Anaeromyxobacter sp.
           Fw109-5]
 gi|152027464|gb|ABS25232.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter sp.
           Fw109-5]
          Length = 378

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 17/175 (9%)

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                          DL+  +       + +  L  T  +KTI +P  G I   +     
Sbjct: 127 RRAARLREGEANAQADLDAAEARAKQAEATVANLTATIAKKTIRAPFDGRI-AIRQVELG 185

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
               Q  P+  +       +    +  + +  +  G    +R   + D    ++   I  
Sbjct: 186 QVVSQGTPIASLQ-SVTPIHADFWLPQQALAELTAGQRVRMRTDAFRDQ---EWDGEITT 241

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA-KNTTLA 423
           ++P +     N        V ++ T   F + +  LR G  A+V   A +  ++ 
Sbjct: 242 VNPEVDAATRN--------VRVRAT---FENADGRLRPGMFAKVDVLAPEERSVL 285



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 37/119 (31%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++   E+GS + +G  L+  +       +   +      R  +       +   N  
Sbjct: 81  GTVREIAFESGSTVKRGDVLVKLDTSAEEAQLAAARAEATLARLSLRRAARLREGEANAQ 140

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             L+ A    ++          +   K             +++L ++ S       L++
Sbjct: 141 ADLDAAEARAKQAEATVANLTATIAKKTIRAPFDGRIAIRQVELGQVVSQGTPIASLQS 199


>gi|90415089|ref|ZP_01223046.1| membrane-fusion protein [Photobacterium profundum 3TCK]
 gi|90323793|gb|EAS40408.1| membrane-fusion protein [Photobacterium profundum 3TCK]
          Length = 368

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 77/215 (35%), Gaps = 31/215 (14%)

Query: 206 FEKNAVSQ--NDLNQQERIVYKSTLEL-RENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           FE  A+ +    L   +  V  + L+  +  +   K        LY + ++   +Y    
Sbjct: 84  FESGAIVKAGQKLIALDSDVENANLQSSQARLPAAKAKYIRYQGLYKKGSISKESY---- 139

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
               +  +  +   ++ +  L+ T +++TI +P  G +V  ++     Y Q       +V
Sbjct: 140 ----DDAEAAYFSLVADIKSLKATIDRRTIKAPFDG-VVGLRNIFLGQYIQPGT---DVV 191

Query: 323 PHSKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
                T ++ +  V    I  +  G    +    Y +     F+  I  I+P ++     
Sbjct: 192 RLEDTTLMKLRFTVPQTDISEIYLGQEVDIFVDAYPET---PFRGKISAIEPAVN----- 243

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                 Y+  L        +N+ +LR+G  A    
Sbjct: 244 ------YQSGLVQIQADIPNNDGQLRSGMFARASI 272



 Score = 40.0 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 44/135 (32%), Gaps = 5/135 (3%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G I     V  I +  SG+I     E+G+ +  G  L+  +       +   +  
Sbjct: 56  VIDAIGFIEPNQGV-MISTEASGVIDDIDFESGAIVKAGQKLIALDSDVENANLQSSQAR 114

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   +      +     L  K  + +++++  E      +    S  + +    I + + 
Sbjct: 115 LPAAKAKYIRYQG----LYKKGSISKESYDDAEAAYFSLVADIKSLKATIDRRTIKAPFD 170

Query: 163 SLKMKLTRMRSIYLN 177
            +          Y+ 
Sbjct: 171 GVVGLRNIFLGQYIQ 185


>gi|186682521|ref|YP_001865717.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
 gi|186464973|gb|ACC80774.1| secretion protein HlyD [Nostoc punctiforme PCC 73102]
          Length = 396

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/340 (10%), Positives = 100/340 (29%), Gaps = 45/340 (13%)

Query: 42  ISVSSSGEILNEDNV-VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLIDLK 99
            +V++ G +  +  V     S     I +  V+ G  +     +   +        ++  
Sbjct: 56  KAVTALGRLEPKGEVIQLTASSQGSRIDRLLVKQGDWVQNKQVIAILDSRPRLQAALEQA 115

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              +   +  +D  K+                                         I  
Sbjct: 116 MQRVAVTQAQLDRVKAG--------------------------------------AKIGE 137

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +     +       +  +    +   + L A   + Q +    ++L++  AVS +  + +
Sbjct: 138 IQAQKAVIARLEVQLREDTAAKKATVTRLDAEAENAQLEYQRYESLYQDGAVSASLRDSK 197

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
             I      +L+E           + +   EA        +    D+   Q    +  + 
Sbjct: 198 RLIFETVVQQLKEAKINFYQTTAILTQQVKEAQATLDRIAEVRPIDIRVAQTEVNNTKAI 257

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFS-SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +   +   +   + +   G I   +  +        ++ ++ +   +   Y  A+V    
Sbjct: 258 VKQAQAELDLAYVRASRPGQI--LKIHTWEGEIVDSNKGIVSLG-QTNQMYAIAEVYESD 314

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +  V K   AT+          +  + +++++   ++++D
Sbjct: 315 LPKVHKDQQATITNVS-GGSLTETLRGVVDEVGLEVAKKD 353


>gi|319404821|emb|CBI78422.1| putative secretion protein [Bartonella rochalimae ATCC BAA-1498]
          Length = 407

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V +SG +     +V + +  +G +   +V +G  + +G  +   +  +  + +  K
Sbjct: 55  IEETVLASGIVRPY-RLVAVGARATGRVVSVRVSSGDFVEEGDLIAEIDPTDQENDLKRK 113

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +      +   ++ L       +   K  E+R     +F      T  K+    I+ 
Sbjct: 114 KAVLSYYYASLKEHEAYLTLAKQNLERQNKLIEARAVSRANFDDAV--TQVKIREAQIAQ 171

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +      +RS  +N
Sbjct: 172 LQEQIVQAQIDVRSAEVN 189



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 101/318 (31%), Gaps = 50/318 (15%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           +  +  + D+ E    S   +    +        +V +  +SS     +  L        
Sbjct: 46  MTAVVTRGDIEETVLASGIVRPYRLVAVGARATGRVVSVRVSSGDFVEEGDLIAEIDPTD 105

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              DL+ K ++L    +S ++    +  L ++N   QN L +   +   +  +    +  
Sbjct: 106 QENDLKRKKAVLSYYYASLKEHEAYL-TLAKQNLERQNKLIEARAVSRANFDDAVTQVKI 164

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           ++  +  + E   +A ++                             E       I +P 
Sbjct: 165 REAQIAQLQEQIVQAQIDV-------------------------RSAEVNLSYTKITAPS 199

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           +GT++             +Q    IV         I+A+++   I  V  G    + F  
Sbjct: 200 SGTVLA-TVVEEGQNINATQSAPTIVILGDLTKMTIKAQISEADILKVHAGQ--DLYFTI 256

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQE-------------YYEVILKITDLAFSDN 401
             D + ++++  +E I+P      +++                 YY  ++ +     ++ 
Sbjct: 257 LGDAK-RRYEGSLETIEPAPEDIRSDISINPNMSGSSSLASSAIYYNGLVHV-----NNK 310

Query: 402 NIELRNGFPAEVLFTAKN 419
           +  LR    A+V      
Sbjct: 311 DRFLRTYMTAQVHIILGR 328


>gi|160897161|ref|YP_001562743.1| RND family efflux transporter MFP subunit [Delftia acidovorans
           SPH-1]
 gi|160362745|gb|ABX34358.1| efflux transporter, RND family, MFP subunit [Delftia acidovorans
           SPH-1]
          Length = 456

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 88/295 (29%), Gaps = 24/295 (8%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +A    +E L+    +              SV RS+      +R        +  + + 
Sbjct: 105 AEAGHDEDEGLIPMDAQRIQVAGLKAAQAGPSVIRSVLQLPGEIRFNEDRTAHVVPRVAG 164

Query: 188 LRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +   + ++         L       AVS+      E +  +  L L    ++++  L   
Sbjct: 165 VAESVPANLGQNVKKGQLLAVLSSVAVSEQR---SELLGAQKRLALARTTYQREKQLWEE 221

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               ++  L+    L+E    +   Q+  A   +          +  + +P  G IV   
Sbjct: 222 KVSAEQDYLQAQQVLREAEIAVSNAQQKLAATGAG-AGAGAGLNRFELRAPFDGVIVEKH 280

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             S     Q +  +  I    +  +   +V+   +  V+ G  ATVR   +         
Sbjct: 281 L-SIGEAVQDTTQVFTIS-DLRSVWAEMRVSAPDLPSVRVGEKATVRATAFESAAT---- 334

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +  +  +I Q                   +   + +   R G    V  TA +
Sbjct: 335 GEVSYVGALIGQDTRTA-----------PARITLPNPDGAWRPGLFVNVEVTASS 378


>gi|122879307|ref|YP_202622.6| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188575143|ref|YP_001912072.1| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188519595|gb|ACD57540.1| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 358

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 85/297 (28%), Gaps = 32/297 (10%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V + A   R + L     + ++   +  N  + +   +L     +  S      +  
Sbjct: 76  QVPVQDFAHVKRGKLLAKIDDRIYAQQLEQANAQMQTAQANLANWEQQRHSAEATIAEQR 135

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  +A     +      + L  +  VS+ D               R+     +    
Sbjct: 136 AALSSNQAQRDRTRSAYARTQQLASQQLVSEQD---------------RDTAFAARAQAD 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                   A        + ++ +    +   A+  + + + +   +   IL+P  G    
Sbjct: 181 AGVVQARAAVQAAEENARGVTVNRAALEAAVANAQAAVRLAQINLDNTRILAPRDG---Q 237

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                   Y      LM +VP     +I A     Q+  ++ G  A+       + R   
Sbjct: 238 LGVR-QGAYVTNGTQLMSLVP--DTLWIVANFKETQMAKIRIGQRASFTVDALDNAR--- 291

Query: 363 FKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNI----ELRNGFPA 411
               ++ I P    +      +     + ++  +I      D +      LR G   
Sbjct: 292 LHGRVQDISPAAGSEFSVLPADNAAGNFVKIAQRIPLRISVDPDQPLAPRLRPGMSV 348



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 1/146 (0%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +    L  I  ++ L  W  L P   ++  +   L    +  I    SG + +  V++ +
Sbjct: 25  IGFGGLALIGVVLVLYAW-RLPPFVSAIERTENALVLGQITVIAPQVSGYVTQVPVQDFA 83

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L   +D      ++     ++  + ++   +               A  S + 
Sbjct: 84  HVKRGKLLAKIDDRIYAQQLEQANAQMQTAQANLANWEQQRHSAEATIAEQRAALSSNQA 143

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYR 162
           Q       Y  T        +S   R
Sbjct: 144 QRDRTRSAYARTQQLASQQLVSEQDR 169


>gi|86357693|ref|YP_469585.1| HlyD family protein secretion protein [Rhizobium etli CFN 42]
 gi|86281795|gb|ABC90858.1| putative protein secretion protein, HylD family [Rhizobium etli CFN
           42]
          Length = 430

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 81/225 (36%), Gaps = 18/225 (8%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD-EANLEFAN 257
           L     L      S+  +N  +  V K+  +L       + +   +      + +L+ A 
Sbjct: 122 LLDTNKLEADVKSSRAKVNSAKANVAKANADLESASTSLERLKSLVRSNVSTQQSLDDAT 181

Query: 258 YLKEISRDLEQ-NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS- 315
           Y  + +   +Q N+       + L + E    +  I+SPI G I+             S 
Sbjct: 182 YKYDSAVAAKQINEAEVLASEADLQLAEVNLAKAKIVSPIDGVILTRSVN-PGATVAASL 240

Query: 316 -QPLM-KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             P++  I    K   ++  V    +  +  G  A      Y D       A IE+I   
Sbjct: 241 SAPILFTIAGDLKKMELQVDVDEADVGKIAVGQKAKFTVDAYPDQSFP---AEIEQI-RF 296

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            S+  NN+ T   Y+ +L +     ++ ++ LR G  A    T +
Sbjct: 297 ASEVVNNVVT---YKAVLSV-----NNADLLLRPGMTATADITVE 333



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 84/234 (35%), Gaps = 11/234 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + V+++G +   + V +I S  SG ++   V+  S +  G  L   +  +   
Sbjct: 72  AKRGDLTVLVTATGSVQPTEQV-DISSELSGTVRDVNVDYNSTVKAGDVLALLDTNKLEA 130

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE---KAFESREEQLLDFLGKYHSTCSK 151
            +   +  + + + ++    + L+  +   + L+   ++  S ++ L D   KY S  + 
Sbjct: 131 DVKSSRAKVNSAKANVAKANADLESASTSLERLKSLVRSNVSTQQSLDDATYKYDSAVAA 190

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                   +     ++L  +       +   +   L R++        ++   +      
Sbjct: 191 KQINEAEVLASEADLQLAEVNLAKAKIVSPIDGVILTRSVNPGATVAASLSAPIL---FT 247

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLKEI 262
              DL + E  V     ++   I   +     ++   D+   A +E   +  E+
Sbjct: 248 IAGDLKKMELQVDVDEADV-GKIAVGQKAKFTVDAYPDQSFPAEIEQIRFASEV 300


>gi|332661831|ref|YP_004451301.1| RND family efflux transporter MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332337328|gb|AEE54428.1| efflux transporter, RND family, MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 416

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 66/211 (31%), Gaps = 24/211 (11%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + ER      L   +   E   +     +   + N+      +++S DL   +      
Sbjct: 137 LRLERAKLNEQLSAAQTNLEYLKLEFARQKELSDENVNAKKVFQKVSADLNAEEGKIKAL 196

Query: 277 MSKLTILEKTRE--------QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            S++TIL +  +          +I +PI+G I      +       ++ L  IV  +   
Sbjct: 197 QSQITILSQNIQIGGNSNSPLISITAPISGHITEVNV-TIGTAVDVAKALFSIV-DNSKM 254

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           ++   V  K +  VK G   TVRF       + + +  I  +      +  ++       
Sbjct: 255 HVDLLVYEKDLFKVKPGQ--TVRFVLTNQDNQ-EIRGKIFSVGKSFESETKSVAVH---- 307

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                      +    L  G     L    +
Sbjct: 308 -------ADIVNEKQMLIPGMYVNALIDVGS 331



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 48/134 (35%), Gaps = 7/134 (5%)

Query: 40  IEISVSSSG-EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +   ++++G   L   N  ++  P  G IK  +V  G  +  G  L T      +   + 
Sbjct: 81  LSDVINANGYTKLPPQNQAQVSVPLPGNIKTIRVIEGQYVKAGQVLATM----VSMAYNN 136

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            ++    L   +   ++ L++L  ++   ++  +        F        ++     I 
Sbjct: 137 LRLERAKLNEQLSAAQTNLEYLKLEFARQKELSDENVNAKKVFQKVSADLNAE--EGKIK 194

Query: 159 SVYRSLKMKLTRMR 172
           ++   + +    ++
Sbjct: 195 ALQSQITILSQNIQ 208


>gi|261323610|ref|ZP_05962807.1| LOW QUALITY PROTEIN: HlyD family secretion protein [Brucella
           neotomae 5K33]
 gi|261299590|gb|EEY03087.1| LOW QUALITY PROTEIN: HlyD family secretion protein [Brucella
           neotomae 5K33]
          Length = 297

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 59/196 (30%), Gaps = 17/196 (8%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +       +       N  +++   +L     +  +     L         +A+L + Q 
Sbjct: 89  IFQLDAGDYQIALDEANAKLATQKETLIRIQAQTDAAKAALLQANADQQAAKAVLLNAQS 148

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  ++ L E   V+Q++L+  +  + ++   L     +  +   +I             
Sbjct: 149 TMARVQKLHETRFVAQSELDNAQSALDQARARLAGADAQIASAKANI------------- 195

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
               +     +   +            +     ++ +P  G I  N S    +     Q 
Sbjct: 196 --SVLEAQYNEAASSTKSLELARDKAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPGQK 252

Query: 318 LMKIVPHSKLTYIRAK 333
           +  +VP     YI A 
Sbjct: 253 IAALVPVD-QLYIDAN 267



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 53/218 (24%), Gaps = 6/218 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----L 106
            + ++  I    +G I+   V    Q+  G  +   +  +    +D     +       +
Sbjct: 57  VQGDIASIAPKVTGYIENIPVAANQQVKAGDVIFQLDAGDYQIALDEANAKLATQKETLI 116

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R    T+ +    L    D           Q      +       V    + +   +L  
Sbjct: 117 RIQAQTDAAKAALLQANADQQAAKAVLLNAQSTMARVQKLHETRFVAQSELDNAQSALDQ 176

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
              R+          +   S+L A  +        ++ L    A                
Sbjct: 177 ARARLAGADAQIASAKANISVLEAQYNEAASSTKSLE-LARDKAARDLSFTSLRAPFDGV 235

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
              L     +     + I  L     L      KE + 
Sbjct: 236 IGNLSGKKGDLVAPGQKIAALVPVDQLYIDANFKETNS 273


>gi|260836845|ref|XP_002613416.1| hypothetical protein BRAFLDRAFT_227179 [Branchiostoma floridae]
 gi|229298801|gb|EEN69425.1| hypothetical protein BRAFLDRAFT_227179 [Branchiostoma floridae]
          Length = 1022

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 68/191 (35%), Gaps = 9/191 (4%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            +KK      R  +D EK   D++  K    E+     E Q L+   K +          
Sbjct: 639 KIKKEQDALKRRSMDIEKQLRDYMQEKEKFQERKERVLERQKLE---KENEEIKLRMQDE 695

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +  + +  +      + I      LE +    +  L +       M+ L E+ AV ++  
Sbjct: 696 LQKLEKQKQTAEAAKQQIATELSSLETERQQQKERLEAE------MRRLAEQEAVQRDRA 749

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + E  + +   EL++   E+  ++       +E   E      + +   + +Q+     
Sbjct: 750 QKFEEDIQRQREELQQEKDEEMRLVEEEKRKVEELKSELGRLRTDANTQKQDHQKELQLA 809

Query: 277 MSKLTILEKTR 287
           + +   LE+ +
Sbjct: 810 VQRFEELEREK 820


>gi|152980920|ref|YP_001353621.1| hypothetical protein mma_1931 [Janthinobacterium sp. Marseille]
 gi|151280997|gb|ABR89407.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 289

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 67/220 (30%), Gaps = 30/220 (13%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L Q E  +     E      E          +    N E A  L  I+    Q      D
Sbjct: 85  LTQAEATLAAQQAEKGMRSKEAARRSTLDASIVTSENREAAASLSSIAGAKYQAAAAARD 144

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                   +   E+  + +P+ G +     ++  ++A    P + ++  S   Y+     
Sbjct: 145 ------TAQLNLERTDVRAPVDGYVTNLHVYA-GDFATAGVPQLAVI-DSNSYYVSGYFE 196

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----------- 384
             ++ ++K      +R            +  IE I   I+ +D +   +           
Sbjct: 197 ETKLPYLKVNDKVEIRL----MSGGPALQGHIESISRGITDRDASTGRELLADINPTFNW 252

Query: 385 ----EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               +   V ++I +L   D N +L  G    V+      
Sbjct: 253 VRLAQRVPVRIRIDEL---DKNHQLVAGMTCTVIVQPGKK 289



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 5/89 (5%)

Query: 53  EDNVVE----IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
           +  V      I    SGI+    V +   + +G  L + +      ++   + ++   + 
Sbjct: 38  DGRVKADILHIAPDVSGIVTNVAVRDNQFVHKGDILFSIDKSRYAHVLTQAEATLAAQQA 97

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQ 137
                +S      +  D      E+RE  
Sbjct: 98  E-KGMRSKEAARRSTLDASIVTSENREAA 125


>gi|88706289|ref|ZP_01103995.1| ABC transporter permease [Congregibacter litoralis KT71]
 gi|88699440|gb|EAQ96553.1| ABC transporter permease [Congregibacter litoralis KT71]
          Length = 426

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 83/227 (36%), Gaps = 11/227 (4%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT-------DLIDLKKVS 102
           I+     V + +   G +++  VE G+ +  G PL+   +             +  +  +
Sbjct: 75  IVEPGRSVFLDAIEGGRVERLLVEEGATVAAGQPLVELSNTTLQLDVIAREAEVSEQLNN 134

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           ++N    I+  + +L     + D          ++  +  GK   + ++  N      Y 
Sbjct: 135 LRNTELAIEQNRLSLKGDLVEIDYQMTRLGRLVKRYTELEGKEFISRNEYENALDELEYW 194

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV--SQNDLNQQE 220
           S + ++T        R+ +  +   L+A +S  +++LT+ +   E   +   ++ L    
Sbjct: 195 SKRREITLASQAQDERIRV-AQMQQLQASVSQLEQNLTLARANLENLLIVAPRSGLLSSF 253

Query: 221 RIVYKSTLELRENIHEQKNMLR-HINELYDEANLEFANYLKEISRDL 266
                 +    E + +  ++     + L +E  L   +  +    +L
Sbjct: 254 DAEIGESKARGERLGQIDDVDHFKASALVNEFYLNRVSVGQRARLEL 300


>gi|74314574|ref|YP_312993.1| multidrug resistance protein MdtN [Shigella sonnei Ss046]
 gi|193063005|ref|ZP_03044097.1| multidrug resistance protein MdtN [Escherichia coli E22]
 gi|193067765|ref|ZP_03048731.1| multidrug resistance protein MdtN [Escherichia coli E110019]
 gi|194426882|ref|ZP_03059435.1| multidrug resistance protein MdtN [Escherichia coli B171]
 gi|209921570|ref|YP_002295654.1| multidrug resistance protein MdtN [Escherichia coli SE11]
 gi|218556640|ref|YP_002389554.1| multidrug resistance protein MdtN [Escherichia coli IAI1]
 gi|218697791|ref|YP_002405458.1| multidrug resistance protein MdtN [Escherichia coli 55989]
 gi|260846876|ref|YP_003224654.1| putative membrane fusion protein of efflux pump [Escherichia coli
           O103:H2 str. 12009]
 gi|300906406|ref|ZP_07124104.1| efflux pump membrane protein [Escherichia coli MS 84-1]
 gi|301302775|ref|ZP_07208904.1| efflux pump membrane protein [Escherichia coli MS 124-1]
 gi|307312075|ref|ZP_07591712.1| efflux pump membrane protein [Escherichia coli W]
 gi|73858051|gb|AAZ90758.1| putative membrane protein [Shigella sonnei Ss046]
 gi|192931264|gb|EDV83866.1| multidrug resistance protein MdtN [Escherichia coli E22]
 gi|192958740|gb|EDV89177.1| multidrug resistance protein MdtN [Escherichia coli E110019]
 gi|194415218|gb|EDX31487.1| multidrug resistance protein MdtN [Escherichia coli B171]
 gi|209914829|dbj|BAG79903.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218354523|emb|CAV01397.1| membrane fusion protein of efflux pump [Escherichia coli 55989]
 gi|218363409|emb|CAR01063.1| membrane fusion protein of efflux pump [Escherichia coli IAI1]
 gi|257762023|dbj|BAI33520.1| predicted membrane fusion protein of efflux pump [Escherichia coli
           O103:H2 str. 12009]
 gi|260451088|gb|ACX41510.1| efflux pump membrane protein [Escherichia coli DH1]
 gi|300401854|gb|EFJ85392.1| efflux pump membrane protein [Escherichia coli MS 84-1]
 gi|300841995|gb|EFK69755.1| efflux pump membrane protein [Escherichia coli MS 124-1]
 gi|306907882|gb|EFN38383.1| efflux pump membrane protein [Escherichia coli W]
 gi|315063406|gb|ADT77733.1| predicted multidrug efflux system component [Escherichia coli W]
 gi|315138637|dbj|BAJ45796.1| multidrug resistance protein MdtN [Escherichia coli DH1]
 gi|315254767|gb|EFU34735.1| efflux pump membrane protein [Escherichia coli MS 85-1]
 gi|323164506|gb|EFZ50307.1| multidrug resistance protein mdtN [Shigella sonnei 53G]
 gi|324017188|gb|EGB86407.1| efflux pump membrane protein [Escherichia coli MS 117-3]
 gi|324118656|gb|EGC12548.1| efflux pump membrane protein [Escherichia coli E1167]
          Length = 343

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSIN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSINATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|312877852|ref|ZP_07737799.1| secretion protein HlyD family protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311795356|gb|EFR11738.1| secretion protein HlyD family protein [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 171

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 61/172 (35%), Gaps = 8/172 (4%)

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L++I  ++        +    L   EK  E   I +   G + Y+    S         
Sbjct: 1   MLQQIDNEISNLSNEIKNLKISLDETEKLIESCNIRAEKDGYVEYSSEMVSGVVVSSGAE 60

Query: 318 LMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           + +IV   +K   +   +   +   ++ G    V+      +     +  + ++   I  
Sbjct: 61  IGRIVGSQAKSFKVIGYIPNTKSSGIEIGQRVKVKLTGADGLN--VVEGKVTRVSRDI-- 116

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH 428
           +  +   Q +YEV +++    +    I+LR G   E+    +   + + ++ 
Sbjct: 117 KVASQSGQGFYEVEVEV---KYVPEGIKLRAGQACEMSIELEQKRVIEWVLE 165


>gi|298484035|ref|ZP_07002204.1| efflux transporter, MFP component, RND family [Bacteroides sp. D22]
 gi|298269816|gb|EFI11408.1| efflux transporter, MFP component, RND family [Bacteroides sp. D22]
          Length = 416

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 109/314 (34%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTCSK 151
            + I + +V + N   ++D E      L  K +  E     R   +    L +  +    
Sbjct: 45  AEDIQIAEVKVSNFMEYVDVEGLIQPILTIKINTREAGSVERIVGEEGSLLQQGDTILVL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + S+         +M +     +++E KS  L+    ++  +L  +K        
Sbjct: 105 SNPDLLRSIEDQRDEWEKQMITYQEQEIEMEQKSLNLKQQALTNNYELERLK-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        + +  + E +   +  N    + +L   + +  I ++L +N R
Sbjct: 157 -KSIALDREEFQMGVKSKAQLQVAEDEYGYKQKNAALQQESLRHDSAVTMIRKELIRNDR 215

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  K     K      I +P+ G + + +  +        + + +I        I 
Sbjct: 216 ER--ERKKYERTCKRLNSLVITAPLKGQLSFVKV-TPGQQVSSGESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRF--PHYADIREKKFKAIIEK---IDPIISQQ-DNNLQTQE 385
             ++   I  +  G  ATV +    Y     K    + ++   +D + +    +N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATVNYQGNKYPLKITKVVPEVKDRMFDVDLVFTGDMPDNVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEQA 345


>gi|182415774|ref|YP_001820840.1| peptidase M50 [Opitutus terrae PB90-1]
 gi|177842988|gb|ACB77240.1| peptidase M50 [Opitutus terrae PB90-1]
          Length = 741

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 54/141 (38%), Gaps = 5/141 (3%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S  R  L +I  + GL+  S  +P    V+    +  E     + S   G+IK+  V  G
Sbjct: 442 SSWRRALTTIAVLAGLVAISFFVPAHYKVTQQAIVTAES-PEVMASDVGGVIKQVHVRTG 500

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  ++T ++ E    + + + + +  R    + + +  +   +      A  ++E
Sbjct: 501 QWVQPGDLVVTLDNPEVIAELRVAEATRQQSRIRFSSLRYSPAWGAAETQ----AHAAQE 556

Query: 136 EQLLDFLGKYHSTCSKVFNYG 156
            +L +   +  S  +      
Sbjct: 557 MELAEASYQVASARAAKLQLR 577


>gi|114776635|ref|ZP_01451678.1| Secretion protein HlyD [Mariprofundus ferrooxydans PV-1]
 gi|114552721|gb|EAU55152.1| Secretion protein HlyD [Mariprofundus ferrooxydans PV-1]
          Length = 383

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/333 (15%), Positives = 110/333 (33%), Gaps = 58/333 (17%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +         V++   +      K  +  L      ++     R      F G + +  +
Sbjct: 28  QGEAQTQTSSVTLSPQQMRQIGLKVEIAALKPLPKTIQAPGTVR------FNGYHLADVT 81

Query: 151 KVFNYGISSVYRSLKMKLTRMRSI----YLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
            + +  +S  +  L  ++++ + +           E      +A     +++   +K L 
Sbjct: 82  SLVDAVVSQRHVRLGDQVSKGKKLVTLTSSALAQAEAVFLQAQAEHRKSRQEWIRIKALA 141

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           ++  VSQ+ L Q E     + + L  +     +    + +    A  +  +Y        
Sbjct: 142 KQKIVSQSRLQQVETTFQSAQVSLAASRASLASY--GLRQQDIAALQKQTDY-------- 191

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                                   T+ +PIAGT++ +  F           LM +V    
Sbjct: 192 ---------------------GALTLHAPIAGTVIQDD-FRIGQQVAAGTLLMTVV-DET 228

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
             ++ AKV   Q+  ++ G  A +R   +ADI   K   I  ++DPI             
Sbjct: 229 TVWVEAKVPESQLFDIRAGQAAIIRSKTHADIFYGKVANIHHQLDPITRTGG-------- 280

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             V L++      + +  L+ G   +V   A +
Sbjct: 281 --VRLEV-----KNPDDSLQPGMFVQVEINAGS 306



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 49/137 (35%), Gaps = 4/137 (2%)

Query: 35  SILLPIEISVSSSGEILNED-NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE-T 92
           + L P+  ++ + G +     ++ ++ S    ++ +  V  G Q+ +G  L+T       
Sbjct: 55  AALKPLPKTIQAPGTVRFNGYHLADVTSLVDAVVSQRHVRLGDQVSKGKKLVTLTSSALA 114

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                  +   ++ +     E   +  L  +  V +   +  E           ++ + +
Sbjct: 115 QAEAVFLQAQAEHRKSR--QEWIRIKALAKQKIVSQSRLQQVETTFQSAQVSLAASRASL 172

Query: 153 FNYGISSVYRSLKMKLT 169
            +YG+     +   K T
Sbjct: 173 ASYGLRQQDIAALQKQT 189


>gi|94676745|ref|YP_588898.1| multidrug resistance protein [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|94219895|gb|ABF14054.1| multidrug resistance protein [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 403

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 12/144 (8%)

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L       +  TI++P++G +   +S    +Y      LM +VP     +I A +   Q+
Sbjct: 215 LRRAYLKNQSSTIVAPVSGYVAK-RSVQIGSYVIPGTTLMVVVPLDH-VWIEANLKETQL 272

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQEYYEVILKIT 394
             ++ G    +R   Y       F   +E +              N        V     
Sbjct: 273 LSIRIGQPVEIRTDLYGKNI--VFHGKVESLGIGTGSAFSLLPAQNASGNWIKIVQRLPV 330

Query: 395 DLAFSDNNIELRN---GFPAEVLF 415
            ++   +N++      G   +V  
Sbjct: 331 RISLDPDNLDCYPLRIGLSTQVKI 354



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 8/55 (14%), Positives = 21/55 (38%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
              N+V+I     G +     + G  + +G  L+  +   T  + +  +  +  +
Sbjct: 69  VTGNLVQITPQLVGTVTMIAADEGDFVKKGQLLVQLDPSMTRVVQESAEAHLAKI 123


>gi|328945954|gb|EGG40101.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK1087]
          Length = 421

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL              ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYATEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNSLKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADSEVTTAQIEAEKAQVTAQTES 208


>gi|311280809|ref|YP_003943040.1| secretion protein HlyD family protein [Enterobacter cloacae SCF1]
 gi|308750004|gb|ADO49756.1| secretion protein HlyD family protein [Enterobacter cloacae SCF1]
          Length = 364

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 76/257 (29%), Gaps = 20/257 (7%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           ++   R D +   S ++A            +        +  D  +QER+  +    +  
Sbjct: 88  ALARARSDYDTVLSSVKANSEGIAAAKAGYQAAVAAYENAAKDAERQERLYREDPGTISV 147

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              E     R        A         E +     N        S +   E  R+   I
Sbjct: 148 RRLEIAQATRETARSQMAAAAADVRKATEAAGIAGDNNSQLLSARSAVRKAELDRKNTLI 207

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++   G +   ++     +     P+M +V  +   +I A +T   + HVK G    +  
Sbjct: 208 VASNRGLVTDLRTD-IGEFVGAGAPVMTLVAIND-VWISADMTENNLGHVKPGDEVAILL 265

Query: 353 PHYADIREKKFKAIIEKID--------------PIISQQDNNLQTQEYYEVILKITDLAF 398
                +    FK  +  I               P I    + L+  + + V +       
Sbjct: 266 ---DSMPGHVFKGEVRSIGYGVNTSSAQPAGALPTIDNNRDWLRQAQRFPVKVAFAKDDL 322

Query: 399 SDNNIELRNGFPAEVLF 415
              +  LR G   +VL 
Sbjct: 323 PPPD-SLRVGGQVDVLV 338



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 74/227 (32%), Gaps = 23/227 (10%)

Query: 18  KRMTLLSIIGIIGLITWSI----LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           +R     ++ I+ L+ W +      P          ++       + +  +G I+K  V 
Sbjct: 13  RRGVTGILVLIVILLCWYLVSDRFTPYTSQARVQAFVVP------VAAEVTGQIQKVYVR 66

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           +  Q+  G PL   +       +   +     +   +      +      Y     A+E+
Sbjct: 67  DNQQVAVGDPLFELDPEPYDIALARARSDYDTVLSSVKANSEGIAAAKAGYQAAVAAYEN 126

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             +        Y      +    +     + +   ++M +   +           +A  +
Sbjct: 127 AAKDAERQERLYREDPGTISVRRLEIAQATRETARSQMAAAAADVR---------KATEA 177

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL----ELRENIHE 236
           +        + L  ++AV + +L+++  ++  S      +LR +I E
Sbjct: 178 AGIAGDNNSQLLSARSAVRKAELDRKNTLIVASNRGLVTDLRTDIGE 224


>gi|302339920|ref|YP_003805126.1| secretion protein HlyD [Spirochaeta smaragdinae DSM 11293]
 gi|301637105|gb|ADK82532.1| secretion protein HlyD family protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 295

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 84/236 (35%), Gaps = 28/236 (11%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +E +     + +   +++L    +L E+       L  Q     +   EL   +   ++
Sbjct: 88  GIEARIQAALSQIDQAKEEL----SLSEETLAKTEKLLPQGGATQQRRDELATQVGVGRS 143

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            +R +   Y                DL Q Q+   + ++ + +        +I +PI G 
Sbjct: 144 KIRGLKANY----------------DLLQAQKK--ELLAGMKLTNIAIRDSSISAPIDGV 185

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           ++ N+   +   A    PL ++        ++  V   Q+  ++ G   ++         
Sbjct: 186 VL-NRFHEAGELAATGTPLFELA-DLSSLTVKIYVPLAQLPALRIGSEVSIMVTG----S 239

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           EK+    +E+I          + T+E  E ++    ++  +    L+ G P +V  
Sbjct: 240 EKRLTGKVEQIADESEFTPKTILTKETRETLVYEVKISVPNPGGLLKIGMPVDVYL 295



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 47/142 (33%), Gaps = 9/142 (6%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + + + + S  +GII    V+ G+ + +G  L   +          +   +  +   I  
Sbjct: 36  DSDTIVLSSQSAGIITSVLVDEGTSVEKGDLLAEIDTERLELQRQQQAAQLDGIEARIQA 95

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
             S +D    +  + E+     E+ L                     +   + +  +++R
Sbjct: 96  ALSQIDQAKEELSLSEETLAKTEKLLP---------QGGATQQRRDELATQVGVGRSKIR 146

Query: 173 SIYLNRLDLENKSSLLRALLSS 194
            +  N   L+ +   L A +  
Sbjct: 147 GLKANYDLLQAQKKELLAGMKL 168


>gi|282881709|ref|ZP_06290372.1| putative lipoprotein [Prevotella timonensis CRIS 5C-B1]
 gi|281304468|gb|EFA96565.1| putative lipoprotein [Prevotella timonensis CRIS 5C-B1]
          Length = 297

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 92/242 (38%), Gaps = 39/242 (16%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           SI   + ++  + + L+  L + +K+    + L    A ++  L+     V     ++  
Sbjct: 84  SIANQKPNVNKQIAALQQQLQTAEKEEKRFEELVNSGAANRKQLDDATSAVNVLRRQIEA 143

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                 +  R +N   +  +++               +R   D+++K            I
Sbjct: 144 QRTALHSDRRALNSQMNANDIQ---------------KRQILDQLAKC----------HI 178

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SPI+G ++  +      +A   +PL K V       +RA VT +Q+QHVK G    V F
Sbjct: 179 TSPISGIVLE-KYAEQGEFASIGKPLFK-VADMNNVILRAYVTNQQLQHVKIGQQVQV-F 235

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             Y + + + ++  +  I P           ++ +  + Y V + +       N+  ++ 
Sbjct: 236 SDYGNEQRETYQGKVVWISPRSEFTPKTILTDDERADQVYAVKVAV------KNDGRIKI 289

Query: 408 GF 409
           G 
Sbjct: 290 GM 291


>gi|226952089|ref|ZP_03822553.1| secretion protein HlyD family protein [Acinetobacter sp. ATCC
           27244]
 gi|226837181|gb|EEH69564.1| secretion protein HlyD family protein [Acinetobacter sp. ATCC
           27244]
          Length = 386

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/395 (11%), Positives = 104/395 (26%), Gaps = 82/395 (20%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +  + +  ++G+I    W    P   +V   G +  E   + I +  +  I++F V  G 
Sbjct: 66  IGLIIVFILLGLIAYGLWKAYQP--QAVELQGRVEAET--INISTKVASRIEEFYVTEGQ 121

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L+ F                                       +    E+++E
Sbjct: 122 AVKKGQALIRF---------------------------------------VSPELEAKKE 142

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q    L    +  S V+      +  +L                       L+       
Sbjct: 143 QAQAALQSAMAFQSTVYRGSQQEIIETLYANW-----------------QALKTQAELAA 185

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                 +NL+++  +S+   ++           L      ++       +          
Sbjct: 186 TTYKRGENLYQQGVISRQRRDEM----------LAAQTSARETAEASYQQYARAKRGSTE 235

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                    +   Q    +            E+  + SP+ GT+        +       
Sbjct: 236 QQKSTADAKVAMAQAAVKE-------ANALTEETKLYSPVDGTVSK-TYGKPTELVATGV 287

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           P++ I+      ++   V     + V +  T     P        K K I  + D    +
Sbjct: 288 PVVSII-EDHEMWVSLNVREDMYESVYQNKTLDGFVPALNQKVTFKVKNIDVEGDFATIK 346

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
                     Y++      L    +  +L+ G   
Sbjct: 347 TTRQTGG---YDIRSFKFHLVPEQSIPDLKVGMSV 378


>gi|119356456|ref|YP_911100.1| RND family efflux transporter MFP subunit [Chlorobium
           phaeobacteroides DSM 266]
 gi|119353805|gb|ABL64676.1| efflux transporter, RND family, MFP subunit [Chlorobium
           phaeobacteroides DSM 266]
          Length = 311

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 63/197 (31%), Gaps = 36/197 (18%)

Query: 239 NMLRHINELYDEANLEFANYLKE--ISRDLEQNQRTFADEMSKLTILEKTR------EQK 290
            +   +    +E  +    Y+    +   L   +R    + +KL    +        ++ 
Sbjct: 52  KIQSSVAGRIEEILVAEGEYVTRGAVLAMLSSTERAALLDAAKLQGKSEQAYWNNVYKKT 111

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            +++P+ G ++   S         S  L  +   S    ++A V    I  VK G  A +
Sbjct: 112 AVIAPMDGQVI-VSSVDPGQTVTTSDSLFVL---SDRLIVKAYVDETDIGRVKVGQKAVI 167

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI----LKITDLAFSDNNIE-- 404
               Y DIR      ++  I               YYE      + I ++      I   
Sbjct: 168 GLDAYPDIR---VNGVVGHI---------------YYESHLQNNVNIYNVDVLPERIPDV 209

Query: 405 LRNGFPAEVLFTAKNTT 421
            R+G  A +    +  +
Sbjct: 210 FRSGMSANIEIIVQQKS 226



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 15/104 (14%)

Query: 20  MTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNEDNVVEIKSPFSG 65
           M +L++ G+ G I ++                  I  SVS++G +  +  V  I+S  +G
Sbjct: 1   MVMLAVFGVGGFIYFNANKSTTKSYEELRVSRGTISSSVSTTGAVEPKTRVK-IQSSVAG 59

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
            I++  V  G  + +G  L      E   L+D  K+  K+ + +
Sbjct: 60  RIEEILVAEGEYVTRGAVLAMLSSTERAALLDAAKLQGKSEQAY 103


>gi|88798147|ref|ZP_01113734.1| putative substate-binding protein involved in drug resistance
           [Reinekea sp. MED297]
 gi|88779344|gb|EAR10532.1| putative substate-binding protein involved in drug resistance
           [Reinekea sp. MED297]
          Length = 386

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 81/247 (32%), Gaps = 19/247 (7%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R +L+ +   +R       ++  ++  L + +  ++ +  +    +    +E  +   E 
Sbjct: 61  RAELDARVEEVRVDEGDPVREGQVLIVLQQDDYETEVNNQRTNVTLRDIDIERAQLQIES 120

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQN------QRTFADEMS-KLTILEKTREQK 290
            N+     +   + N   A+ L+++   + Q       QR   ++    L   +K   + 
Sbjct: 121 LNIQLARQQKLFDQNAAQASTLEDLRNQIAQAEVNLKMQRQLLEQSEFNLAQAQKRLNKT 180

Query: 291 TILSPIAGTIVYNQS-FSSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
            I SP+ G +            A  +  PLM +V      Y    V    I +V +G + 
Sbjct: 181 VIRSPMDGMVSALDIKVGELAVATGADIPLMTLV-DPTQIYSEVDVDEADIGNVLEGQSV 239

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            +    Y D        ++  I     Q           EV ++  D       + LR G
Sbjct: 240 RIFAVAYLDT---PLDGVVTDIATSARQVPGKNSLVFPVEVEVQPQDE------VVLRPG 290

Query: 409 FPAEVLF 415
                  
Sbjct: 291 MSTRAEI 297



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 56/162 (34%), Gaps = 1/162 (0%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           PIE +V ++G +   D            +++ +V+ G  + +G  L+  +  +    ++ 
Sbjct: 41  PIESTVLATGTLRYGDERRIRAELD-ARVEEVRVDEGDPVREGQVLIVLQQDDYETEVNN 99

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           ++ ++      I+  +  ++ LN +    +K F+    Q        +       N  + 
Sbjct: 100 QRTNVTLRDIDIERAQLQIESLNIQLARQQKLFDQNAAQASTLEDLRNQIAQAEVNLKMQ 159

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                            LN+  + +    + + L     +L 
Sbjct: 160 RQLLEQSEFNLAQAQKRLNKTVIRSPMDGMVSALDIKVGELA 201



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/305 (9%), Positives = 92/305 (30%), Gaps = 25/305 (8%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++     +    +        L+    + +R  +D     +           +     +
Sbjct: 30  DEVRVFDVIEQPIESTVLATGTLRYGDERRIRAELDARVEEVRVDEGDPVREGQVLIVLQ 89

Query: 136 EQLLDFL---GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +   +      + + T   +          SL ++L R + ++       +    LR  +
Sbjct: 90  QDDYETEVNNQRTNVTLRDIDIERAQLQIESLNIQLARQQKLFDQNAAQASTLEDLRNQI 149

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHIN-ELYD 249
           +  + +L M + L E+   S+ +L Q ++ + K+ +   +   +      +  +      
Sbjct: 150 AQAEVNLKMQRQLLEQ---SEFNLAQAQKRLNKTVIRSPMDGMVSALDIKVGELAVATGA 206

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +  L       +I  +++ ++    + +   ++           +P+ G +    + +  
Sbjct: 207 DIPLMTLVDPTQIYSEVDVDEADIGNVLEGQSVRIFAVAYLD--TPLDGVVTDIATSARQ 264

Query: 310 NYAQQSQPLMKIVPHSKLTY--IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                       VP        +  +V P+    ++ G +      +  D          
Sbjct: 265 ------------VPGKNSLVFPVEVEVQPQDEVVLRPGMSTRAEILNSTDRAFPLVPIEA 312

Query: 368 EKIDP 372
            + D 
Sbjct: 313 VQEDA 317


>gi|238787894|ref|ZP_04631690.1| Multidrug resistance protein A [Yersinia frederiksenii ATCC 33641]
 gi|238723842|gb|EEQ15486.1| Multidrug resistance protein A [Yersinia frederiksenii ATCC 33641]
          Length = 390

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 66/179 (36%), Gaps = 8/179 (4%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS------TLELR 231
               E   + L   +    + +   K      A+ + +LN+ +  + +           R
Sbjct: 98  EQAYEQAKTALANSVRQTHQLMINSKQYQANIALKKTELNKAQNDLKRRVVLGSVDAIGR 157

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E +   ++ +       D A  ++      +     + Q       +KL     + ++  
Sbjct: 158 EELQHARDAVESAQASLDVAIAQYNANQALVLNTPLEKQPAVEQAAAKLRDAWLSLQRTK 217

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           ++SPI G +   +S           PLM ++P ++  +I A     Q+ +++ G +ATV
Sbjct: 218 VVSPITGFVSR-RSVQVGAEIANGAPLMAVIPANE-MWIDANFKETQLANMRIGQSATV 274



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 57/160 (35%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N V+I S   G +     EN   +  G  LLT +  +     +  K ++ N      
Sbjct: 57  VSGNQVQIMSQVPGSVVSVNFENTDLVKSGDVLLTLDPTDAEQAYEQAKTALANSVRQTH 116

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I++++   +    K ++ +   + +   +L  +        +     + S   SL +
Sbjct: 117 QLMINSKQYQANIALKKTELNKAQNDLKRRVVLGSVDAIGREELQHARDAVESAQASLDV 176

Query: 167 KLTR--MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            + +       +    LE + ++ +A        L++ + 
Sbjct: 177 AIAQYNANQALVLNTPLEKQPAVEQAAAKLRDAWLSLQRT 216


>gi|238752957|ref|ZP_04614418.1| Multidrug resistance protein A [Yersinia rohdei ATCC 43380]
 gi|238708818|gb|EEQ01075.1| Multidrug resistance protein A [Yersinia rohdei ATCC 43380]
          Length = 390

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 70/183 (38%), Gaps = 5/183 (2%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
              ++    +  L N       L+ + ++ L  +    +K  +S+   + Q R+V  +  
Sbjct: 96  DAEQAYEQAKTALANTVRQTHQLMVNSKQYLANIA--LKKTELSKAQNDLQRRVVLGAAA 153

Query: 229 EL-RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            + RE +   +          D A  ++      +     + Q       +KL       
Sbjct: 154 AIGREELQHAREAAEAAQSSLDVAIAQYHANQALVLDTPLEKQPAVEQAAAKLRDAWLAL 213

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           ++  ++SPI G +   +S           PLM ++P ++  +I A     Q+ +++ G +
Sbjct: 214 QRTKVVSPITGFVSR-RSVQVGAEIANGAPLMAVIPANE-MWIDANFKETQLANMRIGQS 271

Query: 348 ATV 350
           ATV
Sbjct: 272 ATV 274



 Score = 43.1 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N V+I S   G +     EN   +  G  LL  +  +     +  K ++ N      
Sbjct: 57  VSGNQVQIMSQVPGSVISVNFENTDFVKSGDVLLALDPTDAEQAYEQAKTALANTVRQTH 116

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  +++++   +    K ++ +   + +   +L           +       +   SL +
Sbjct: 117 QLMVNSKQYLANIALKKTELSKAQNDLQRRVVLGAAAAIGREELQHAREAAEAAQSSLDV 176

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKN 204
            + +  +     LD  LE + ++ +A        L + + 
Sbjct: 177 AIAQYHANQALVLDTPLEKQPAVEQAAAKLRDAWLALQRT 216


>gi|89899226|ref|YP_521697.1| secretion protein HlyD [Rhodoferax ferrireducens T118]
 gi|89343963|gb|ABD68166.1| Secretion protein HlyD [Rhodoferax ferrireducens T118]
          Length = 537

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 37/269 (13%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRAL---------LSSHQKDLTMMKNLFEKNAVSQNDL 216
               R+ +  + +L +  +++ LRAL         +   ++ +  +   FE   V +  +
Sbjct: 95  ANQVRISTEKVQKLGVRVEAAQLRALDKSVRASGRIEPDERRVYAISPKFE-GYVERLHV 153

Query: 217 NQQERIVYKSTL-------ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           N   + V K          EL     E     + +  L D A  +  + +++++    Q 
Sbjct: 154 NVTGQAVGKGQPLFEVYSPELVSAQREYAIAAQGVATLKD-AGGQAQSGMQQLAGASLQR 212

Query: 270 QRTFADEMSKLTILEKTREQK---TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            R +    +++  L ++       T  SP++G ++  ++          + L +I   S 
Sbjct: 213 LRNWDISEAQIKALTQSGATTRTLTFRSPVSGIVMEKKAV-QGMRFMPGEALYQIADLST 271

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
           +  I A V  + I  VK G  ATV    Y D   K F   +  + P +  +         
Sbjct: 272 VWVI-ADVFEQDIGLVKNGAKATVSINAYPD---KAFAGRVTYVYPTLKAETRT------ 321

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLF 415
             V +++     ++  + L+ G  A+V  
Sbjct: 322 --VAVRV---ELANPGLLLKPGMFAQVEL 345



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 5/126 (3%)

Query: 40  IEISVSSSGEILNEDNVV-EIKSPFSGIIKKFQVE-NGSQILQGTPLLTF---EDIETTD 94
           ++ SV +SG I  ++  V  I   F G +++  V   G  + +G PL      E +    
Sbjct: 120 LDKSVRASGRIEPDERRVYAISPKFEGYVERLHVNVTGQAVGKGQPLFEVYSPELVSAQR 179

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
              +    +  L+      +S +  L        + ++  E Q+        +T +  F 
Sbjct: 180 EYAIAAQGVATLKDAGGQAQSGMQQLAGASLQRLRNWDISEAQIKALTQSGATTRTLTFR 239

Query: 155 YGISSV 160
             +S +
Sbjct: 240 SPVSGI 245


>gi|325696802|gb|EGD38690.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK160]
          Length = 421

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL              ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYATEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNSLKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADSEVTTAQIEAEKAQVTAQTES 208


>gi|296329762|ref|ZP_06872247.1| putative efflux permease [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674159|ref|YP_003865831.1| putative efflux permease [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296153260|gb|EFG94124.1| putative efflux permease [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412403|gb|ADM37522.1| putative efflux permease [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 377

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 66/171 (38%), Gaps = 13/171 (7%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I  +V   G +   +          G ++  +V+ G ++ +GTPL+T+ + + +   + 
Sbjct: 46  EISATVMVPGTLKFSNEQYVFYEADKGTLEDIKVKEGDKVKKGTPLITYTNEQLSLEKEQ 105

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +++ ++ +  ID  +  +  L++K   LEK    +E +             K      +
Sbjct: 106 NQLTAESNQLQIDQIQEKVKALDSKEKELEKQVGKKEAE-------------KQIESERT 152

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +    +     ++   L R  L N+ S L+         +++ +    K 
Sbjct: 153 ELQMQERTAEIELKQTELQRQSLANRVSDLQVKSDIEGTVISVNQEAASKK 203



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 72/199 (36%), Gaps = 28/199 (14%)

Query: 214 NDLNQQERIVYKSTLELRE-NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           N+    E+   + T E  +  I + +  ++ ++    E   +      E   + E+ +  
Sbjct: 96  NEQLSLEKEQNQLTAESNQLQIDQIQEKVKALDSKEKELEKQVGKKEAEKQIESERTELQ 155

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS--SSNYAQQSQ-----------PLM 319
             +  +++ + +   +++++    A  +   Q  S         +Q           P++
Sbjct: 156 MQERTAEIELKQTELQRQSL----ANRVSDLQVKSDIEGTVISVNQEAASKKSDIQEPVI 211

Query: 320 KIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            I  P      +  K++      VKKG   T+       I++K +K  +  +  +  QQ+
Sbjct: 212 HIGNPKD--LVVSGKLSEYDTLKVKKGQKVTL---TSDVIQDKTWKGTVSAVGLVPDQQE 266

Query: 379 NNLQTQEY----YEVILKI 393
           +           Y + +KI
Sbjct: 267 STAAQGTEQAVQYPLQVKI 285


>gi|304317964|ref|YP_003853109.1| secretion protein HlyD [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302779466|gb|ADL70025.1| secretion protein HlyD family protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 236

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 11/129 (8%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I SPI G ++ + +         S  L  I       YI+A +   +I+ VK G    V
Sbjct: 108 EIKSPIKGEVIESNAV-VGQLVSPSSSLAVIADTDDA-YIKANIKETEIRKVKIGEKVDV 165

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI--LKITDLAFSDNNIE 404
               Y     K F   +  I    +       +    + Y +V   + +  +     N++
Sbjct: 166 NIDAYP---GKTFDGTVASIGYATNSVFSLLPSQNSGENYIKVTQVIPVKIVLTDGQNVK 222

Query: 405 LRNGFPAEV 413
           L  G  A V
Sbjct: 223 LMPGMNATV 231


>gi|160895577|ref|YP_001561159.1| secretion protein HlyD family protein [Delftia acidovorans SPH-1]
 gi|160361161|gb|ABX32774.1| secretion protein HlyD family protein [Delftia acidovorans SPH-1]
          Length = 314

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 77/198 (38%), Gaps = 4/198 (2%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           + +L ++   S+ R  L     D T   +L    A S+  L +  +    + L   +   
Sbjct: 77  VQQLSVKEGQSVQRGQLLLRLADDTGQADLAV--AESEAQLAKARQKARAARLPQLKQTL 134

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            +            +   E A  L++   +++           KL  L    +++ + +P
Sbjct: 135 SRWQAAAREGAADAQNVDEAAQALRDAQAEIDVAAAEAQVAQRKLEQLRAQHKRQELRAP 194

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            AGT+V   + +  + A    P + ++P  +   +RA++       V++G  ATV     
Sbjct: 195 EAGTVVRLATHA-GSQAVPGTPAVVLLPQ-RPLQVRAEINESFAAAVREGMRATVTLDAD 252

Query: 356 ADIREKKFKAIIEKIDPI 373
              +++   A + +I P+
Sbjct: 253 GAAQQQLPSARVLRISPV 270



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/156 (10%), Positives = 49/156 (31%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
                + G+I  E  ++++    +G++++  V+ G  + +G  LL   D      + + +
Sbjct: 51  ASVAVARGKIEVEGGLLDLSPAVAGVVQQLSVKEGQSVQRGQLLLRLADDTGQADLAVAE 110

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +  +       + L  L       + A         +      +         +++ 
Sbjct: 111 SEAQLAKARQKARAARLPQLKQTLSRWQAAAREGAADAQNVDEAAQALRDAQAEIDVAAA 170

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              +  +          R +L    +     L++H 
Sbjct: 171 EAQVAQRKLEQLRAQHKRQELRAPEAGTVVRLATHA 206


>gi|304438085|ref|ZP_07398028.1| secretion protein HlyD [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368858|gb|EFM22540.1| secretion protein HlyD [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 357

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 57/204 (27%), Gaps = 18/204 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            ++  D+ QQ           R  +   +       ELY  A       L +   +    
Sbjct: 95  VINARDIQQQVNAAGAGVASARAQLDLARANRARYEELYA-AQAISEAMLDQYRTNERAA 153

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +  +   +++ T          +++   G I    +          Q +M +        
Sbjct: 154 EAAYRQALAQNTQSSNALGYTNLIAGADGVISGIAA-EEGQVVAAGQTVMTLT-QDGERE 211

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I   V   ++  V  G  A V                + +I P+             Y V
Sbjct: 212 IEIAVPESRLAEVSIGMPAAVSLWA----NHAALTGTVREIAPVADAAGGT------YAV 261

Query: 390 ILKITDLAFSDNNIELRNGFPAEV 413
            + + D   +  ++ L  G  A V
Sbjct: 262 RIALAD---APADLPL--GMTAHV 280



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/155 (10%), Positives = 43/155 (27%), Gaps = 4/155 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I    V  G+ +  G  L+     +    ++     + + R  +D  ++        
Sbjct: 73  GGQILSRNVSLGAHVHAGDVLMVINARDIQQQVNAAGAGVASARAQLDLARANRARYEEL 132

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y     +    ++   +      +    +     SS        +     +       E 
Sbjct: 133 YAAQAISEAMLDQYRTNERAAEAAYRQALAQNTQSSNALGYTNLIAGADGVISGIAAEEG 192

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +       + +  +D      +    AV ++ L +
Sbjct: 193 QVVAAGQTVMTLTQDGEREIEI----AVPESRLAE 223


>gi|226951814|ref|ZP_03822278.1| FusE-MFP/HlyD membrane fusion protein [Acinetobacter sp. ATCC
           27244]
 gi|294649065|ref|ZP_06726510.1| possible multidrug resistance efflux pump [Acinetobacter
           haemolyticus ATCC 19194]
 gi|226837354|gb|EEH69737.1| FusE-MFP/HlyD membrane fusion protein [Acinetobacter sp. ATCC
           27244]
 gi|292825050|gb|EFF83808.1| possible multidrug resistance efflux pump [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 333

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 53/165 (32%), Gaps = 4/165 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++ S  +G++ +  V++   + +G  L T +       ++  K  +      + 
Sbjct: 44  VRGDVIQVASDVNGLVTEVLVQDNQTVKKGQVLFTIDVARQALDVEQAKSDLAKANAGLA 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ L          E   +  E+    +        SK        V+ +    L   
Sbjct: 104 QAQANLAGAKASLVKTEANMKLAEKNAARYASLMDGAISK---QEQDQVFAARDQALAER 160

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQND 215
             +               AL+   Q +L + + NL     V+  D
Sbjct: 161 EQLTATIEQANAAIQQQHALIEVAQSNLHLAQLNLQRSEVVAPAD 205



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 84/235 (35%), Gaps = 6/235 (2%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            ++      +   ++V      +V +   +    +    L+    ++  +   A L+  Q
Sbjct: 47  DVIQVASDVNGLVTEVLVQDNQTVKKGQVLFTIDVARQALDVEQAKSDLAKANAGLAQAQ 106

Query: 197 KDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            +L   K +L +  A     L ++    Y S ++   +  EQ  +    ++   E   + 
Sbjct: 107 ANLAGAKASLVKTEA--NMKLAEKNAARYASLMDGAISKQEQDQVFAARDQALAE-REQL 163

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              +++ +  ++Q         S L + +   ++  +++P  GT+         NY +  
Sbjct: 164 TATIEQANAAIQQQHALIEVAQSNLHLAQLNLQRSEVVAPADGTLSNFDLR-VGNYVKVG 222

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           QP+  ++      Y+       ++  +  G  ATV+        +   + I   I
Sbjct: 223 QPVAALL-DRHQLYVVGYFEETKLNRIHVGDQATVQLMGDKQKIQGHVQGIATGI 276


>gi|162456122|ref|YP_001618489.1| hypothetical protein sce7839 [Sorangium cellulosum 'So ce 56']
 gi|161166704|emb|CAN98009.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 709

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/352 (11%), Positives = 96/352 (27%), Gaps = 57/352 (16%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            +    +  +   +V  G ++  G  + T +       I + K     +   ++ E + L
Sbjct: 50  VLSPVETARVASIEVTVGEEVEAGQIIATLDTSVIDAEIAVAKAEKTQVEADLNMELALL 109

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +                                +  +    +V R L +     R     
Sbjct: 110 E--------------------------------QELDTNRETVERHLAVHREEQRRAAAE 137

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
              L+++ S ++ L+ + Q  L  +  L                    +   +     E+
Sbjct: 138 AKVLDSEISRMKQLVENRQAVLEDLTKL------------------DLAHATVTAIASEK 179

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              L  + E                S    +           + +LE+ R    + +  A
Sbjct: 180 PRTLSVLTEQLKATERRRNGLRDRTSGLAAKLDADVRVATENIAMLEQRRASYVLRAANA 239

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G ++        +      PL++++         A V  +    V  G  A +    Y  
Sbjct: 240 GRVISIDR-QPGDVVPAGMPLVQLLSARTGARAIACVPERFALGVSDGDAAEL----YVR 294

Query: 358 IREKK-FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            +        +  + P++SQ               ++  ++  D  + L  G
Sbjct: 295 GQLGDAIPGTVIAVGPLVSQLPPRCWLTPELPAWGRVVTISL-DAPMALVPG 345


>gi|172065052|ref|YP_001815764.1| RND family efflux transporter MFP subunit [Burkholderia ambifaria
           MC40-6]
 gi|171997294|gb|ACB68211.1| efflux transporter, RND family, MFP subunit [Burkholderia ambifaria
           MC40-6]
          Length = 322

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 72/226 (31%), Gaps = 27/226 (11%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q      ER+   +  + R  + + K       +L    NL  +  ++E    +EQ 
Sbjct: 77  VIDQARYALAERLAEATLAQRRATLAQAKREYARNLQLG---NLVASEQVEESRTRVEQG 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   AD    L   +   ++ TI+SP+ G  + +++     Y    + ++ +V       
Sbjct: 134 EAAVADAQVSLDTAKLNLQRTTIVSPVDGY-LNDRAPRVGEYVPAGRAVLSVV-DRNSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----- 384
           +       +++ +  G    +             +  ++ I   I  +D           
Sbjct: 192 VDGYFEETKLRGIHIGQPVDIVVMGEPH----PLRGHVQSIVAAIEDRDRTQGANLLPNV 247

Query: 385 ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                     +   V + + ++    ++  +  G  A V       
Sbjct: 248 NPAFSWVRLAQRVPVRVVLDEV---PDDFRMIAGRTATVAVRTDTR 290



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 60/169 (35%), Gaps = 23/169 (13%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW--------SILLPIEISVSSSGEILNEDNVVEIK 60
           +K+   ++ + +  L ++ + GL+ W        S     +  V +        +V+++ 
Sbjct: 1   MKKTWLSAGQILLTLIVVVVAGLVLWRIINYYMFSPWTR-DGHVRA--------DVIQVA 51

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG+I   QV +  ++ +G  L   +         L + ++   R  +   K      
Sbjct: 52  PDVSGLITTVQVADNQEVTRGQVLFVIDQARYALAERLAEATLAQRRATLAQAKREYAR- 110

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 L+       EQ+ +   +     + V +  +S     L ++ T
Sbjct: 111 -----NLQLGNLVASEQVEESRTRVEQGEAAVADAQVSLDTAKLNLQRT 154


>gi|90414574|ref|ZP_01222548.1| putative multidrug resistance protein [Photobacterium profundum
           3TCK]
 gi|90324381|gb|EAS40947.1| putative multidrug resistance protein [Photobacterium profundum
           3TCK]
          Length = 381

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 96/275 (34%), Gaps = 24/275 (8%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSL--LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
               + + + ++  N+L LE +S+   L+A L   Q +   +  L  +    +    Q +
Sbjct: 72  QAVKQGSELLTLNRNKLSLEQQSAEANLKATLRQVQSNYIKIDQLKAQVQAEKIAYKQAK 131

Query: 221 RIVYKSTLE------LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +   +          L E +   KN +   ++     N +       + ++   N     
Sbjct: 132 QDYNRRIGGDKDGSVLPEVLAHAKNAVNISSQNLVALNKQLEASEVLLPKEKLLNNPQVE 191

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
             +S+L  +   +   TI++P +G I   ++       Q  Q LM +VP +   +I A  
Sbjct: 192 AAISQLRKVYLAQVNSTIIAPKSGMIAK-RAVQVGQQIQPGQALMTLVPLN-KVWIEANF 249

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQ----- 384
              Q+ +++ G   T+    Y       +  ++  I         +    N         
Sbjct: 250 KETQLTNMQAGQPVTLISDLYGSKHT--YTGVVAGIGAGTGSAFSAIPAQNATGNWIKVI 307

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +   V + +    F  + + +  G   +V    ++
Sbjct: 308 QRVPVRIYVDPAQFKTHPLRI--GMSMKVTVDTES 340



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 56/150 (37%), Gaps = 2/150 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                V I S   G I    V++   + QG+ LLT    + +      + ++K     + 
Sbjct: 48  VAGQQVMITSQEPGTIDTINVDDTQAVKQGSELLTLNRNKLSLEQQSAEANLKATLRQVQ 107

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLG--KYHSTCSKVFNYGISSVYRSLKMKLT 169
           +    +D L  +    + A++  ++     +G  K  S   +V  +  ++V  S +  + 
Sbjct: 108 SNYIKIDQLKAQVQAEKIAYKQAKQDYNRRIGGDKDGSVLPEVLAHAKNAVNISSQNLVA 167

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             + +  + + L  +  L    + +    L
Sbjct: 168 LNKQLEASEVLLPKEKLLNNPQVEAAISQL 197


>gi|1709655|sp|P30427|PLEC_RAT RecName: Full=Plectin; Short=PCN; Short=PLTN; AltName: Full=Plectin-1
 gi|1561642|emb|CAA42169.1| plectin [Rattus norvegicus]
          Length = 4687

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1483 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1542

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1543 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1595

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1596 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1654

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1655 AELALRVKAEAEAAREKQR 1673



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 76/229 (33%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2323 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2376

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2377 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2436

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   + + +     ++ 
Sbjct: 2437 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ--EQARRLQADKEQMA 2494

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +   E   + + +  +  Q Q   + E  +L +      +    +   
Sbjct: 2495 QQLVEETQGFQRTLEAE-RQRQLEMSAEAERLKLRMAEMSRAQARAEED 2542



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 66/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L+   E   +QL++    +  T        +   
Sbjct: 2460 QEATRLKAEAELLQQQKELAQEQARRLQADKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2519

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2520 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2577

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2578 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2637

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2638 EKDSLLQRERFIEQ 2651



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 65/200 (32%), Gaps = 12/200 (6%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + + LR  +  E+ A      + D  ++  E+  E       +  +   +       
Sbjct: 1775 QLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1834

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLN 217
               R L     + R        L  +  L+R  L +  +     + L E+     Q++  
Sbjct: 1835 EKQRQLTEGTAQQR--------LAAEQELIR--LRAETEQGEHQRQLLEEELARLQHEAT 1884

Query: 218  QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               +   +   EL +   E + +L       +E+        + +  +     R  A+E 
Sbjct: 1885 AATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEA 1943

Query: 278  SKLTILEKTREQKTILSPIA 297
            ++L  L +   +   L+   
Sbjct: 1944 ARLRALAEEARRHRELAEED 1963



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2372 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2431

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2432 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQADKE 2491

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2492 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2551

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2552 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2582



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1481 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1540

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1541 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1600

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1601 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1660

Query: 291  T 291
             
Sbjct: 1661 V 1661



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 69/222 (31%), Gaps = 15/222 (6%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKY 145
            + + T  L  + + +       I  ++   +    +    ++AF+ R  EEQ        
Sbjct: 1972 DGVLTEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADI 2031

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LL 192
                +++     S + R   +    +R       ++    +                  +
Sbjct: 2032 EERLAQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRI 2091

Query: 193  SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
             S+ +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E  
Sbjct: 2092 RSNAEDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEV 2151

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                  ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2152 ERLKAKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2193



 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 68/224 (30%), Gaps = 16/224 (7%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
                  +  E  + +  ++L+             E++  +       + E+A    ++Q 
Sbjct: 1699 RARQVQVALETAQRSAEVELQSKRPSFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQA 1758

Query: 139  LDFLGKYHSTCS-KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                 +  +    + +    +   R         +   L + D E +            K
Sbjct: 1759 EAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGK 1818

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1819 --------AEEQAVRQRELAEQELEKQRQLTEGTAQQRLAAEQELIRLRAETEQGEHQRQ 1870

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1871 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1914


>gi|320107323|ref|YP_004182913.1| RND family efflux transporter MFP subunit [Terriglobus saanensis
           SP1PR4]
 gi|319925844|gb|ADV82919.1| efflux transporter, RND family, MFP subunit [Terriglobus saanensis
           SP1PR4]
          Length = 465

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/277 (11%), Positives = 74/277 (26%), Gaps = 39/277 (14%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +++   ++  + T + S        E   +   A L   + D+   + L+++  VS+
Sbjct: 96  QATVAAQNATISSQKTDVNSYLAAEKTAEANVTQAVADLQQKRFDIERYEKLYDQKLVSK 155

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            D + ++     S   L++                   +   A+                
Sbjct: 156 QDYDSRKAAYDVSAATLQQRQAAVAQSKAQTASALGHVDQAVASQRANF----------- 204

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS----SSNYAQQ-SQPLMKIVPHSKLT 328
                         ++    +P  G +            +         LM +     + 
Sbjct: 205 -----------DALDKTISRAPFNGLVTNVPVREGETMVTGIQNAQGSTLMTLA-DMSVI 252

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE-----KIDPIISQQDNNLQT 383
               KV    + +VK      V          K     +      +   I + Q      
Sbjct: 253 TAEVKVDETDVVNVKLNQQVEVTVDALPGKSFKGHVTEVGDQALLRTTGIATSQSTTGTE 312

Query: 384 QEY-YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +   ++V++ + + A +     LR G  A    T   
Sbjct: 313 EAKDFKVVVTLDEDAPA-----LRPGLSATAKITTAR 344



 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   VS +G+I  +  V  + +   G I    V+ G  +  G  L T E ++    +  +
Sbjct: 44  LVSVVSGTGQIKPKTYV-NVGATAFGRITHLYVKEGDHVAAGQVLATLESVQPQATVAAQ 102

Query: 100 KVSIKNLR----CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             +I + +     ++  EK+A   +      L++     E    + L        + ++ 
Sbjct: 103 NATISSQKTDVNSYLAAEKTAEANVTQAVADLQQKRFDIER--YEKLYDQKLVSKQDYDS 160

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             ++   S      R  ++  ++    +    +   ++S + +   +
Sbjct: 161 RKAAYDVSAATLQQRQAAVAQSKAQTASALGHVDQAVASQRANFDAL 207


>gi|253998138|ref|YP_003050201.1| RND family efflux transporter MFP subunit [Methylovorus sp. SIP3-4]
 gi|253984817|gb|ACT49674.1| efflux transporter, RND family, MFP subunit [Methylovorus sp.
           SIP3-4]
          Length = 387

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 59/137 (43%), Gaps = 6/137 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IEI+VS+ G +     V ++ +  SG I++  V  GS + +G  L+  +      ++D  
Sbjct: 41  IEINVSALGTLQPRSYV-DVGAQVSGQIRRIHVAPGSHVEKGELLIEIDPSIQQAVVDSD 99

Query: 100 KVSIKNLRCHIDTEKSALDFLNNK---YDVLEKAFESREEQLLDFLGKYHSTCSKV--FN 154
           + ++  L+  +   ++  +    +      L K   +REE +   L  + +  ++V    
Sbjct: 100 RATLAALKAQLLESQAQSELAGQQHRRQQQLAKDDATREEDVQTALASWRAAEARVDNLR 159

Query: 155 YGISSVYRSLKMKLTRM 171
             I     +LK    ++
Sbjct: 160 AQIDGAQSTLKGHEAQL 176



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 74/209 (35%), Gaps = 13/209 (6%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + + +  ++  EL    H ++  L   +   +E         +     ++  +      
Sbjct: 106 LKAQLLESQAQSELAGQQHRRQQQLAKDDATREEDVQTALASWRAAEARVDNLRAQIDGA 165

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHSKLTYIRAKV 334
            S L   E       I +P+AGT+V  ++         +   P++  +       + A+V
Sbjct: 166 QSTLKGHEAQLGYTRIYAPMAGTVVSLEAR-EGQTLNATYQTPMILRIADLSSMTVWAEV 224

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNNLQTQEYY---- 387
           +   +  VK G      F       +++++  + ++    P  + Q  + +T+       
Sbjct: 225 SEVDVTRVKPGMPVY--FTRLG-TEQRRWQGKVRQVLPAPPTAAGQGQSSETKPAASSVG 281

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +V+        ++ + +L     A+V F 
Sbjct: 282 KVVTYTVLFDVANADGDLMPQMTAQVFFV 310


>gi|152986746|ref|YP_001347112.1| hypothetical protein PSPA7_1728 [Pseudomonas aeruginosa PA7]
 gi|150961904|gb|ABR83929.1| hypothetical protein PSPA7_1728 [Pseudomonas aeruginosa PA7]
          Length = 323

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 98/366 (26%), Gaps = 92/366 (25%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           ++             G ++   V  G  + +G  L++ +  E              L   
Sbjct: 40  VIVSSKAK-------GRVQVLHVRRGDDVKRGDLLVSLDSPE--------------LEAQ 78

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +D                                          +   +     L   L 
Sbjct: 79  LDA----------------------------------------LHAARNQAQAQLDESLH 98

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN--DLNQQERIVYKST 227
             R    +   L    +   A L + + D    + + E+  +S+   DL ++ER V +  
Sbjct: 99  GTR--EESIRALRASLAQAEAELRNAEADFQRNQQMVERGFLSRTQFDLARRERDVARD- 155

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                           + E     +       +E  + L+   R    ++++L       
Sbjct: 156 ---------------RVAEARANLDEGLKGDREERRQALQAAVRRADAQIAELQAQTDDL 200

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGY 346
           +   + +P+ G +    +           PL+ +V      ++      + I   V+KG 
Sbjct: 201 Q---VRAPVDGEVGPIPA-EQGELINAYSPLLTLVRLDDSYFV--FNLREDILAKVRKGD 254

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNNIEL 405
              ++ P        + +  +  I P+              +++    T          L
Sbjct: 255 HIVMQVPGLGGA---EVETELRYIAPLGDFSTRRATRATGDFDLKTFETRFYPLRPTPGL 311

Query: 406 RNGFPA 411
           R G  A
Sbjct: 312 RPGMSA 317


>gi|332557977|ref|ZP_08412299.1| polysaccharide export protein [Rhodobacter sphaeroides WS8N]
 gi|332275689|gb|EGJ21004.1| polysaccharide export protein [Rhodobacter sphaeroides WS8N]
          Length = 410

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 57/183 (31%), Gaps = 11/183 (6%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +   R  +  E+     L    ++      +   +   F+           +     
Sbjct: 172 REGMMARRARLLAERDNQTDLGPVPELDTARGRALLAEEKSFM-----------DLRRDQ 220

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V R+L     +   +      L+ K+  L    +  +K+    KNL E+  V+   L + 
Sbjct: 221 VDRNLAAIDAQSELLKAEIEALQAKTGQLETQRTLAEKETANAKNLSERGLVASGRLFET 280

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +R +     +L +         + I     +          EI+  L++ +    +   K
Sbjct: 281 QRTLSTVESQLLDTSTAILRARQGITTAERDRIALIDGRSSEIAAQLQEVEAQILEMDRK 340

Query: 280 LTI 282
           +  
Sbjct: 341 IDT 343


>gi|319407763|emb|CBI81410.1| Transport protein transmembrane [Bartonella sp. 1-1C]
          Length = 323

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/324 (15%), Positives = 109/324 (33%), Gaps = 21/324 (6%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           I   +S    +     ++         QL  F+     T + +    I+ +   +   + 
Sbjct: 2   IKILRSKSTIVAFLSGIMGIVLILWAWQLPPFVSTLQKTNNALIKGNITLISPQVSGIVK 61

Query: 170 RMRSIYLNRLD-----LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           R+      +++      E   +L R  L+  Q  L   K       + Q  L Q+E    
Sbjct: 62  RVYVQDYQKVEKGMVLFELDDTLFRYQLAQAQAILEAKKAKLASVLL-QIKLLQKEIDRI 120

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYL-KEISRDLEQNQRTFADEMSKLTIL 283
           ++ L   +N++ Q  +       +  A  E  + L K++  + +  Q   A+  + + + 
Sbjct: 121 RTELSHSKNLNAQGTLPLSSASSHLSATFETKSQLHKKLEFERQGLQSDIAEAKAGVEVA 180

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E       I+SP  G I          Y +    L+ +V  S   +I A     QI +++
Sbjct: 181 ELNLAHTKIISPAVGHIGSVGI-QVGQYVESGMRLVAVV--SDDIWIIAHYKETQISNMR 237

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY--------EVILKITD 395
            G      F     ++ +K    + +  P    + + L T+  +         + ++I  
Sbjct: 238 IGQPVI--FYA-DALKNQKLTGRVVRFAPATGSEFSLLGTETAHGNFIKIAQRISIRIAI 294

Query: 396 LAFSDNNIELRNGFPAEVLFTAKN 419
               +   +L  G          +
Sbjct: 295 DQGQEGIEKLIPGMSVITYVDTAS 318



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 77/185 (41%), Gaps = 9/185 (4%)

Query: 20  MTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           +  LS I  I LI W+  L P   ++  +   L + N+  I    SGI+K+  V++  ++
Sbjct: 12  VAFLSGIMGIVLILWAWQLPPFVSTLQKTNNALIKGNITLISPQVSGIVKRVYVQDYQKV 71

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  L   +D        L +  +   +  ++ +K+ L  +  +  +L+K  +    +L
Sbjct: 72  EKGMVLFELDDT-------LFRYQLAQAQAILEAKKAKLASVLLQIKLLQKEIDRIRTEL 124

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                  ++  +   +   S +  + + K    + +   R  L++  +  +A +   + +
Sbjct: 125 -SHSKNLNAQGTLPLSSASSHLSATFETKSQLHKKLEFERQGLQSDIAEAKAGVEVAELN 183

Query: 199 LTMMK 203
           L   K
Sbjct: 184 LAHTK 188


>gi|260892028|ref|YP_003238125.1| biotin/lipoyl attachment domain-containing protein [Ammonifex
           degensii KC4]
 gi|260864169|gb|ACX51275.1| biotin/lipoyl attachment domain-containing protein [Ammonifex
           degensii KC4]
          Length = 220

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 5/132 (3%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + SP+ G ++   +          QP++ +V   +  YI A V   +I  V  G    V
Sbjct: 91  IVRSPVKGVVLKVSAR-PGEVVGAGQPVV-LVGDPRQFYITANVDESKIWRVHHGQRVEV 148

Query: 351 RFPHYADIRE-KKFKAIIEKIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIELRN 407
           R           +   I   +    S       +  + +V   + +         ++LR 
Sbjct: 149 RIDALPGRVFEGRIAEINTAVASTFSLIPTRSTSGSFVKVSQRVPVKIYLLDAKGVDLRL 208

Query: 408 GFPAEVLFTAKN 419
           G  AEV   A+ 
Sbjct: 209 GESAEVKIFARE 220


>gi|260436730|ref|ZP_05790700.1| secretion protein HlyD [Synechococcus sp. WH 8109]
 gi|260414604|gb|EEX07900.1| secretion protein HlyD [Synechococcus sp. WH 8109]
          Length = 357

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 72/202 (35%), Gaps = 12/202 (5%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K   +   L+   + +  +  L   N V   +L  Q     +     + +  E   +L  
Sbjct: 31  KVQAVSTQLAEFTEGIDTVSTLESSNIV---ELAAQSGGRIEQLKIRQGDEVEAGQLLLV 87

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI----LEKTREQKTILSPIAGT 299
           +++  ++AN + A    E    L +   T  +E+ +        +   +   + SP AGT
Sbjct: 88  LDQDEEKANADTAKANYERYAYLAEVGATSQEELDRYRTQYIEAKAKLDYTNLRSPSAGT 147

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +   +     +  +Q +    +V  +     + +V       +++G    +  P      
Sbjct: 148 VADVKV-KVGDVIRQGEVFTSLV-QNNELEAKVEVPAIFSARLQEGQPVVLMAPG---SE 202

Query: 360 EKKFKAIIEKIDPIISQQDNNL 381
           E     ++E IDP I+     L
Sbjct: 203 EIIATGVVESIDPRINPNTQGL 224



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 103/312 (33%), Gaps = 28/312 (8%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
             N+VE+ +   G I++ ++  G ++  G  LL  +  E     D  K + +        
Sbjct: 54  SSNIVELAAQSGGRIEQLKIRQGDEVEAGQLLLVLDQDEEKANADTAKANYERY------ 107

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                 +L       ++  +    Q ++   K   T  +  + G  +  +     + R  
Sbjct: 108 -----AYLAEVGATSQEELDRYRTQYIEAKAKLDYTNLRSPSAGTVADVKVKVGDVIRQG 162

Query: 173 SIY---LNRLDLENKSSLLRALLSSHQKDL------TMMKNLFEKNAV----SQNDLNQQ 219
            ++   +   +LE K  +     +  Q+           + +     V     + + N Q
Sbjct: 163 EVFTSLVQNNELEAKVEVPAIFSARLQEGQPVVLMAPGSEEIIATGVVESIDPRINPNTQ 222

Query: 220 ERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
             ++  + L     + +   +   +  +  ++  + FA  ++   +       +F +   
Sbjct: 223 GLLLIAAFLNTDGILRDGLRLHTRVQIKAEEQLAVPFAAVIQTSGQSFVFRLGSFDELRE 282

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                +  + +  I +   G +  N  F+        +    + P +K   +  KV    
Sbjct: 283 NPGKADLRKLELGIKA---GKLPSNMQFALQTPVTVGELENNLYPITKGLKLNQKVATTN 339

Query: 339 IQHVKKGYTATV 350
           + +++ G    V
Sbjct: 340 LLNLRHGMPVQV 351


>gi|262194702|ref|YP_003265911.1| efflux transporter RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
 gi|262078049|gb|ACY14018.1| efflux transporter, RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
          Length = 519

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 101/316 (31%), Gaps = 25/316 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +    +  ++  S  I  + + V  I++   GI+++ +VE G+++ +G PL   E     
Sbjct: 185 AQRAQVAAAIECSARIAFDSDRVADIRAIVPGIVRRVRVELGAEVARGAPLFELESTRVG 244

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           ++    + + + +R     E      L        +  E  E++L     +  +  + + 
Sbjct: 245 EIQGTLQAARERVRA-AQAEVERQRALRASEIASARQLELAEQELASARAEARTAEAMLR 303

Query: 154 NYGISSVYRSLKMKLTR-MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
             G +    S +  L+  +    + R  +    +  R  L++      M     + E +A
Sbjct: 304 MAGAAQSAPSGRYTLSAPLAGTVVRRPAVVGLLASERESLATIADTSVMWALCEVAESDA 363

Query: 211 V-----SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEI 262
                  +  ++ Q R       EL     E     R +    + AN E    AN     
Sbjct: 364 AGVALGQRVQVDLQGREGAPLAGELTWIAAEVDPRTRTVTARAELANPEGRLRANQFARA 423

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
                       D +S      +   ++ ++    G       +      +  +      
Sbjct: 424 RIHTGAAHGAALDAVSVPRAAVQRVGEREVVFVRTGV----GVYQPRVVVRHGE------ 473

Query: 323 PHSKLTYIRAKVTPKQ 338
              +   +  +V P  
Sbjct: 474 --GERVQVEGRVQPGD 487


>gi|226313208|ref|YP_002773102.1| chromosome partition protein SMC [Brevibacillus brevis NBRC 100599]
 gi|226096156|dbj|BAH44598.1| chromosome partition protein SMC [Brevibacillus brevis NBRC 100599]
          Length = 1190

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 76/214 (35%), Gaps = 7/214 (3%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           L  ++ E   L+  K+   ++L       +  ++    + +  ++  E  +  L   + +
Sbjct: 725 LRLKEQEVKGLLQQKESEGRSLGERAKLVEQDIESYRREMEEAKRKQEQLQTSLTA-MEQ 783

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                S+      +     L+ K    + I   ++         ++ L   ++ L     
Sbjct: 784 EEKELSEQIAEAEAKRQEQLESKEEMNQKITSLKVLNAQVKQEYQSRLEQTERLLEQKTQ 843

Query: 205 L---FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN---Y 258
           L   +E+   +   L++ ER    S LEL + I E +     +  L  E   E A     
Sbjct: 844 LQHEWEEQNANLASLDELERTNESSGLELDQRISELRQDKDRVAGLIQERRSERATLFYK 903

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            +++ + +++ +R       KL   E    +  +
Sbjct: 904 QEQVEQQVKEIRREVKSLEEKLHQEEVKVNRNEV 937


>gi|212634250|ref|YP_002310775.1| secretion protein [Shewanella piezotolerans WP3]
 gi|212555734|gb|ACJ28188.1| Secretion protein, putative [Shewanella piezotolerans WP3]
          Length = 380

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 92/302 (30%), Gaps = 49/302 (16%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   +    +SLK     + +   N    + K +   A   + Q     +  + +K  +S
Sbjct: 105 YEIALHQAEQSLKKAGQNVGAQTANVTAAQAKVTNAVANYKNAQVQSKRIFTMVDKQVMS 164

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q D +     + K+   +     +       +                       +N   
Sbjct: 165 QADADNARAELTKAEAGVASAKADLAKAEERLGAE-------------------GENNTN 205

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +  L   +   ++ +I +P  G +  N       YA   QP+M  +  S+  +I A
Sbjct: 206 VKSALLSLEQAQLNLQRTSITAPTDG-VASNFRLKEGIYASAGQPIMTFI-SSEDVWIEA 263

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--------------PIISQQD 378
                 + ++  G               + FKA +  ID                IS Q 
Sbjct: 264 YFRENSLGNITSGDEVEF---ALDYAPGQVFKAKVGSIDYGIDWGQSEQTGKLAQISGQT 320

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
             L+  + + V + ++        +    G  A+V+   K+ ++           + + +
Sbjct: 321 GWLRQSQRFPVTIVLSKDEAV--GLRRVGG-QADVIVYTKDNSMIN--------LFGRAW 369

Query: 439 ER 440
            R
Sbjct: 370 IR 371


>gi|192289946|ref|YP_001990551.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192283695|gb|ACF00076.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 313

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 65/212 (30%), Gaps = 18/212 (8%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q  L   E  V  +  +L     E +   R  +    +   +        +   +     
Sbjct: 93  QIALASAEATVASARADLANKQAEAERRDRLSSLAVSKEEQQI------YAAAADIAAAA 146

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +S L        +  I+SP+ G +       + +YA   Q  + IV  S   ++ A
Sbjct: 147 LRQALSNLDKARLALSRTEIVSPVDGYVTNL-VTQAGDYATGGQRALSIV-DSGSFWVDA 204

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL--QTQEYY--- 387
                 ++ ++ G  A V    Y      +   I   I    ++ D +        +   
Sbjct: 205 YFEETLLRGIRVGDRARVALMAYPQTLAGEVVGIERGIAVPNAESDPSGLATVNPVFTWV 264

Query: 388 ----EVILKITDLAFSDNNIELRNGFPAEVLF 415
                V ++I  L     +I L  G  A V  
Sbjct: 265 RLAQRVPVRIA-LKKVPPSIVLAAGLTATVSI 295



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
                VV +    SG I +  V+    + +G PL+  + ++    +   + ++ + R  +
Sbjct: 51  TVRAYVVGVTPQVSGRISELAVKAAQYVRKGDPLMKIDPVDFQIALASAEATVASARADL 110

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLL 139
             +++  +    + D L     S+EEQ +
Sbjct: 111 ANKQAEAE----RRDRLSSLAVSKEEQQI 135


>gi|222109477|ref|YP_002551741.1| secretion protein hlyd family protein [Acidovorax ebreus TPSY]
 gi|221728921|gb|ACM31741.1| secretion protein HlyD family protein [Acidovorax ebreus TPSY]
          Length = 402

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 85/292 (29%), Gaps = 26/292 (8%)

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH------- 195
                         +     +L   + + R++Y N   L  +  L  A  +         
Sbjct: 83  AALVQLDPADARVALQQAEANLAQAVRQTRTLYANNSALAAQVRLREAEAARAQAEIARA 142

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + DL   + L  + AVSQ +L   +  +  +  +L             +           
Sbjct: 143 EDDLRRRQALTGEGAVSQEELRHAQSQLQTARTQLAAAQAGVAAAREQLVSNQSLTQGVA 202

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                 +     + +  +  +            +  + +P+ G +   ++          
Sbjct: 203 VAQHPSVQAAAAKVREAYLADR-----------RTALPAPVDGYVAR-RTVQLGQRVAAG 250

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV------RFPHYADIREKKFKAIIEK 369
            PLM IVP  +  ++ A     Q+++++ G  AT+      +   Y              
Sbjct: 251 TPLMTIVPL-REVWVDANFKENQLRNLRLGQRATLVADLYGKKVEYTGTVAGLGVGTGAA 309

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
              + +Q       +    V ++I   A       LR G    V    ++ +
Sbjct: 310 FALLPAQNATGNWIKVVQRVPVRIALDAGQLAEHPLRVGLSMNVSVDTQDRS 361


>gi|196229125|ref|ZP_03127990.1| secretion protein HlyD family protein [Chthoniobacter flavus
           Ellin428]
 gi|196226357|gb|EDY20862.1| secretion protein HlyD family protein [Chthoniobacter flavus
           Ellin428]
          Length = 394

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 69/226 (30%), Gaps = 18/226 (7%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     +  +   K     ++S    L       R +     +   K + L   +   +K
Sbjct: 92  LFKMDPEPFALAVKAAEAKLASDKAKLVTAEASERGLQDQLRNASAKKAALTPRIDLAKK 151

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +     L    A  + DL Q +  +     E       +  + + ++   +   L+   
Sbjct: 152 RVEQFTQLASTGAGKRADLEQAQADLGNLESEFLAADATESQVKQKLSARVEGGELD--- 208

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ- 316
                  ++ Q +   A   + L   +        L+P  G +V           + +Q 
Sbjct: 209 -------EVAQAKAQIAKSEADLGSAKYDLSGTVHLAPADGRVVNLALR-PG--VRATQF 258

Query: 317 ---PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
              P+M  V       + A     ++++V+ G  A +    Y D  
Sbjct: 259 ATMPVMSFVEEDNPWVL-AFYHQNELRYVEPGDEAEIFVEMYPDRI 303


>gi|171913229|ref|ZP_02928699.1| hypothetical protein VspiD_18655 [Verrucomicrobium spinosum DSM
           4136]
          Length = 333

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 75/213 (35%), Gaps = 3/213 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
             +V+++G +      V I  P +G++ +  V+    +  G  L   +D +       + 
Sbjct: 52  ASTVAATGILEALSENVAIGVPVAGLVTEVPVKVNQSVKAGALLFKIDDRDLQAQKVRQD 111

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            S++  R  +  +K+ L    ++ D ++   +SR   + +   + +     +    + + 
Sbjct: 112 ASVEVARARVGVQKATLAKAQDQLDRVKSVPDSRALSVDEIRARENEVA--IAKAQLLAS 169

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              L   L  ++   +    L  ++     +L  + +      N+ +   +   DL + +
Sbjct: 170 EAELTAALAEVKQTQVMIDRLHVQAPRDGVVLQVNIRAGEFATNVKDSPVMVLGDLEKLQ 229

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
            +      +    I E +     I      A  
Sbjct: 230 -VRADVDEQNASRIREGQKATAFIKGDTKTAIQ 261



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 52/146 (35%), Gaps = 16/146 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +  ++ +    V K+TL   ++  ++   +     L  +      N +      L  ++ 
Sbjct: 112 ASVEVARARVGVQKATLAKAQDQLDRVKSVPDSRALSVDEIRARENEVAIAKAQLLASEA 171

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--------PLMKIVP 323
                ++++   +   ++  + +P  G ++           +  +        P+M +  
Sbjct: 172 ELTAALAEVKQTQVMIDRLHVQAPRDGVVLQVN-------IRAGEFATNVKDSPVMVLG- 223

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTAT 349
             +   +RA V  +    +++G  AT
Sbjct: 224 DLEKLQVRADVDEQNASRIREGQKAT 249


>gi|153837101|ref|ZP_01989768.1| MacA [Vibrio parahaemolyticus AQ3810]
 gi|149749689|gb|EDM60434.1| MacA [Vibrio parahaemolyticus AQ3810]
          Length = 362

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 81/293 (27%), Gaps = 54/293 (18%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q+   + +           G          +   ++    +   L  +    +A +   
Sbjct: 34  AQVSGQIQRLAVNLGDEIKQGDLIAQIDSLTQQNSLKEAQASLNSLNAQYQAKQAQIKQA 93

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +    K +    A S+ D    E  +     EL +   E +    +++          
Sbjct: 94  NYEYVRQKGMLAAKASSRADYENAEATLAIYKAELAQLDAEIEKAKINVDN--------- 144

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                       +      TI +P+ GT+VY            +
Sbjct: 145 ---------------------------AQLDLGYTTINAPMDGTVVYTAV-EEGQTVNAN 176

Query: 316 QPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP- 372
           Q    I+  +      ++A+++   +  V  G TA   F       + +FK  +  I+P 
Sbjct: 177 QTTPTIIELAKLDTMTVKAEISEADVIFVHPGQTA--LFTILGKPNQ-QFKGTLRAIEPG 233

Query: 373 ------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   S    +     YY  +  +      +    LR G  A+V    + 
Sbjct: 234 PTIMDGDDSDLSISDSDAIYYNAVFDV-----KNPQGILRIGMTAQVSIVLEQ 281



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 53/130 (40%), Gaps = 3/130 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE +V ++G +     +V + +  SG I++  V  G +I QG  +   + +   + + 
Sbjct: 12  GNIEKAVLANGMLQAS-KLVNVGAQVSGQIQRLAVNLGDEIKQGDLIAQIDSLTQQNSLK 70

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S+ +L      +++ +   N +Y   +    ++     D+     +    ++   +
Sbjct: 71  EAQASLNSLNAQYQAKQAQIKQANYEYVRQKGMLAAKASSRADYENAEATLA--IYKAEL 128

Query: 158 SSVYRSLKMK 167
           + +   ++  
Sbjct: 129 AQLDAEIEKA 138


>gi|332088995|gb|EGI94107.1| hlyD family secretion family protein [Shigella boydii 5216-82]
          Length = 331

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  ++Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYHRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+ +P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLTAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVTV 322



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 93/305 (30%), Gaps = 47/305 (15%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  I  G  L   +           ++++   +  +   ++  D +   
Sbjct: 51  GGRVESLAVDEGDAIKAGQVLGELDH-------KPYEIALMQAKADVSVAQAQYDLMLAG 103

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E A  +   +       Y    ++ F +    +++S  +    + +   +R   + 
Sbjct: 104 YRDEEIAQAAAAVKQAQAAYDY----AQNFYHRQQGLWKSRTISANDLENARSSRDQAQ- 158

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L   ++   +  ++Q           K++LE  +    Q  +   
Sbjct: 159 ------ATLKSAQDKLRQYRSGNREQDIAQ----------AKASLEQAQAQLAQAELNLQ 202

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            + L   ++        E    L +    F   +++   +    +++ +     G  V  
Sbjct: 203 DSTLTAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLL 262

Query: 304 Q--------SFSSSNYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYT 347
                          +   +    +  P +            R ++        +++G  
Sbjct: 263 YTDGRPDKPYHGQIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMP 319

Query: 348 ATVRF 352
            TV+F
Sbjct: 320 VTVQF 324


>gi|113954092|ref|YP_729338.1| RND family efflux transporter MFP subunit [Synechococcus sp.
           CC9311]
 gi|113881443|gb|ABI46401.1| efflux transporter, RND family, MFP subunit subfamily
           [Synechococcus sp. CC9311]
          Length = 384

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 40/120 (33%), Gaps = 17/120 (14%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFS-----------GIIKKFQVENGSQILQGTPL 84
             L I  +  S G       +  +    S           G + K  V  G Q+  G  +
Sbjct: 36  TFLSINTATISQGNFKPS--IKAVSPLESTTNVTLSPETDGRVIKKLVREGDQVQAGQVI 93

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEK----SALDFLNNKYDVLEKAFESREEQLLD 140
           L  ++ + +  +D  +   +  R + +  +            +   + KA  SR++ + D
Sbjct: 94  LVLDNTQLSAQLDASQSQARYDRVNAERYQFLYEQGAASAKRRDAYVTKAITSRDQAIAD 153



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 52/181 (28%), Gaps = 17/181 (9%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + D  ++K L  +           +    +  L L       +         YD  N E 
Sbjct: 71  ETDGRVIKKLVREG---------DQVQAGQVILVLDNTQLSAQLDASQSQARYDRVNAER 121

Query: 256 ANYLKEISRDLEQNQ----RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             +L E      + +            +    + T   K + SPI G I    +    +Y
Sbjct: 122 YQFLYEQGAASAKRRDAYVTKAITSRDQAIADKATLNYKFVRSPINGVIGDLDTVKIGDY 181

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +    +  IV  +   +   ++   Q   VK G    +         +   K  I  + 
Sbjct: 182 VKTGDIITGIV-DNSTLWTLMEIPASQASQVKVGQPVRL---ASQSTPQVTGKGTITFVS 237

Query: 372 P 372
           P
Sbjct: 238 P 238


>gi|260774509|ref|ZP_05883423.1| probable RND efflux membrane fusion protein [Vibrio metschnikovii
           CIP 69.14]
 gi|260610636|gb|EEX35841.1| probable RND efflux membrane fusion protein [Vibrio metschnikovii
           CIP 69.14]
          Length = 361

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 76/209 (36%), Gaps = 25/209 (11%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + LFE  A     + + + +V   +   + N+   K  L      Y+     F+      
Sbjct: 75  RILFESGA----QVEEDQPLVMLDSAVEQANLKSSKARLPAAKAKYERYKGLFSKG-SIS 129

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              L+  + ++    + +  L+    ++ I +P AG +V  ++ +   Y Q       IV
Sbjct: 130 KEALDDAEASYYSLAADIESLKAAIARREIKAPFAG-VVGIRNVNLGQYLQPGT---DIV 185

Query: 323 PHSKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
                T +R +  V    I  +  G    +    Y D     FK  I  I+P +S Q   
Sbjct: 186 RLEDTTVMRLRFTVPQTDISRIFIGQNVDIFVDAYPDD---SFKGSITAIEPAVSVQSGL 242

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +Q Q               +++ +LR+G 
Sbjct: 243 IQVQ-----------ADIPNSDGKLRSGM 260



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 40/115 (34%), Gaps = 4/115 (3%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG+I +   E+G+Q+ +  PL+  +       +   K  +   +   +  K     L +
Sbjct: 69  TSGVIDRILFESGAQVEEDQPLVMLDSAVEQANLKSSKARLPAAKAKYERYKG----LFS 124

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           K  + ++A +  E           S  + +    I + +  +          YL 
Sbjct: 125 KGSISKEALDDAEASYYSLAADIESLKAAIARREIKAPFAGVVGIRNVNLGQYLQ 179


>gi|260555102|ref|ZP_05827323.1| secretion protein HlyD [Acinetobacter baumannii ATCC 19606]
 gi|260411644|gb|EEX04941.1| secretion protein HlyD [Acinetobacter baumannii ATCC 19606]
          Length = 340

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/401 (13%), Positives = 121/401 (30%), Gaps = 82/401 (20%)

Query: 17  LKRMTLLSIIGIIGLITWSIL--LPIEISVSSS-GEILNEDNVVEIKSPF-SGIIKKFQV 72
           +  + ++  +  IG   W       ++  V +  G +          +   SG I+K  V
Sbjct: 6   IAGILVVIAVVAIGFWVWGYNHKKQLDNDVLTLYGNVDI---RQVSLAFEQSGRIQKLLV 62

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G ++  G  L T                                              
Sbjct: 63  QEGDKVQAGQVLATLNT------------------------------------------N 80

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           + + Q      +  +    +    I +    +     ++ S              L+ L+
Sbjct: 81  ALQIQAKQAQAQLKAQQEAIIKQEIGARPEEITQAKAQLASAQAELDKTNKNLQRLQILV 140

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           SS            +  A+SQ +L+  +   + +   +RE     + +++   +   EA 
Sbjct: 141 SST-----------DGRAISQQELDYAKSNQHSAEAAVRERQANLELLIKGARKEDREA- 188

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                            +  +    + L +++    Q  + SP+   +V  +     +  
Sbjct: 189 ----------------TRAQYEVTKANLDLIKYNLTQAELRSPVNA-VVRARLQEVGD-M 230

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             +Q  +  +  +   +IR  V  + +  +K G TA +    Y +         I  I  
Sbjct: 231 TTAQKAVYTLALTNPKWIRVYVNEQDLSSIKMGGTAQIIHDAYPNQ---PMNGKIGYISS 287

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +       +QT+E    ++    +   D N +L+ G P  V
Sbjct: 288 VAEFTPKTVQTEEIRTTLVYEVRVYVHDPNDQLKMGQPVTV 328


>gi|221638960|ref|YP_002525222.1| polysaccharide export protein [Rhodobacter sphaeroides KD131]
 gi|221159741|gb|ACM00721.1| Polysaccharide export protein precursor [Rhodobacter sphaeroides
           KD131]
          Length = 410

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 57/183 (31%), Gaps = 11/183 (6%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +   R  +  E+     L    ++      +   +   F+           +     
Sbjct: 172 REGMMARRARLLAERDNQTDLGPVPELDTARGRALLAEEKSFM-----------DLRRDQ 220

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V R+L     +   +      L+ K+  L    +  +K+    KNL E+  V+   L + 
Sbjct: 221 VDRNLAAIDAQSELLKAEIEALQAKTGQLETQRTLAEKETANAKNLSERGLVASGRLFET 280

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +R +     +L +         + I     +          EI+  L++ +    +   K
Sbjct: 281 QRTLSTVESQLLDTSTAILRARQGITTAERDRIALIDGRSSEIAAQLQEVEAQILEMDRK 340

Query: 280 LTI 282
           +  
Sbjct: 341 IDT 343


>gi|212213415|ref|YP_002304351.1| periplasmic component of efflux system [Coxiella burnetii
           CbuG_Q212]
 gi|212011825|gb|ACJ19206.1| periplasmic component of efflux system [Coxiella burnetii
           CbuG_Q212]
          Length = 332

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 129/410 (31%), Gaps = 89/410 (21%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R     L R     + G++ L   S   P+ +     G+ +   + V      SG++K
Sbjct: 1   MERIPGMRLIRPIFWLLFGMLLLSGCSKNQPVLLQGYVEGQFIYLSSSV------SGLLK 54

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V  G  + +   L   +        + ++  ++  +  +  EK  L+ L        
Sbjct: 55  SLLVYRGDSVKEDQTLFILDP-------EPQQSELQEAKAKLTQEKENLENL-------- 99

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                         G+  +  +++      ++   +  + T  R  +L R+   +K  L 
Sbjct: 100 ------------VKGQRQTILNRIIAEREQAIADMIYAQQTLTRFQHLYRVRAISKDELD 147

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +A                +K  V+Q + N  E             + E+K+++     + 
Sbjct: 148 KATADYK----------AKKQIVNQTEANLAE-----------AQLGERKHLILAQQAVV 186

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D A    A  + E                          +QKT+++P  G I     F  
Sbjct: 187 DAAQANVAKLIWE-------------------------LDQKTVVAPKNGNIFD-TFFKV 220

Query: 309 SNYAQQSQPL-MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             Y    QP+   + P++        +    +  +K G     +       R     A +
Sbjct: 221 GEYVPAGQPVTALLTPNNIKLIF--YIPEPLLSRLKLGTVVEFKCNACTMQR-----AKV 273

Query: 368 EKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             I P        + +Q    +++ ++       N ++   G P +V   
Sbjct: 274 TYISPEAEYTPPIIYSQKSRAKLVYRVECAIPEKNALKFHAGQPVDVYLH 323


>gi|218780187|ref|YP_002431505.1| efflux transporter, RND family, MFP subunit [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761571|gb|ACL04037.1| efflux transporter, RND family, MFP subunit [Desulfatibacillum
           alkenivorans AK-01]
          Length = 388

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 78/222 (35%), Gaps = 6/222 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +        I++  +G I ++ V  G+Q+ +G  L+  +  +    ++     + +
Sbjct: 67  AVGTVRPRTETQ-IEAQATGRILQYNVSPGTQVQKGQVLIQLDSDQLNAQVEEATQGLVS 125

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG--KYHSTCSKVFNYGISSVYRS 163
            R   +  K  L+     +D   KA++  +          +        +    + V ++
Sbjct: 126 ARAMHEQAKQGLEQAKAAFDEAAKAYQRVKTYFASEAATQQQLEQAESAYLQAQAGVRQA 185

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS---QNDLNQQE 220
                     +   +  ++ +         +   D  ++K L EK  ++   +  L  Q 
Sbjct: 186 EDGVKAARAGVAGAQKVVDQRMIAKSYTTITAPTDGEVVKRLAEKGDLAWPGKPLLVIQT 245

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           R   +    +RE +  +  +   +    D  +L     ++EI
Sbjct: 246 RSQLRLEAVVREGLISRVRIGTPLEIAIDSMDLIIEGTVEEI 287



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 94/302 (31%), Gaps = 24/302 (7%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR-----SIYLNRLD 180
           V   A E+     ++ + +Y+     V     + +      ++ +        +   ++ 
Sbjct: 45  VSAPAPEATATVSVEDIIEYYEAVGTVRPRTETQIEAQATGRILQYNVSPGTQVQKGQVL 104

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           ++  S  L A +    + L   + + E+                K+   ++     +   
Sbjct: 105 IQLDSDQLNAQVEEATQGLVSARAMHEQAKQGLEQAKAAFDEAAKAYQRVKTYFASEAAT 164

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            + + +  + A L+    +++    ++  +   A     +      +   TI +P  G +
Sbjct: 165 QQQLEQA-ESAYLQAQAGVRQAEDGVKAARAGVAGAQKVVDQRMIAKSYTTITAPTDGEV 223

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V  +     + A   +PL+ I        + A V    I  V+ G    +       I E
Sbjct: 224 VK-RLAEKGDLAWPGKPLLVIQ-TRSQLRLEAVVREGLISRVRIGTPLEIAIDSMDLIIE 281

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              + I+   DP+             + + + +           +  G    ++  A   
Sbjct: 282 GTVEEIVPSADPVTRT----------FLIKVDLPQTQ------GMFPGMFGRLMIPASTR 325

Query: 421 TL 422
           ++
Sbjct: 326 SV 327


>gi|148658319|ref|YP_001278524.1| hypothetical protein RoseRS_4231 [Roseiflexus sp. RS-1]
 gi|148570429|gb|ABQ92574.1| hypothetical protein RoseRS_4231 [Roseiflexus sp. RS-1]
          Length = 514

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/411 (13%), Positives = 118/411 (28%), Gaps = 46/411 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV   G +          +   G++K   V   ++I +G  L   E  E  D +   
Sbjct: 63  IERSVELQGRVAAVGERELFFAVD-GVVKAVYVTPDTEITRGQVLAELEAGELEDRLAQA 121

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL---DFLGKYHSTCSKVFNYG 156
           K      +  +D     + F   + ++  +   +   QLL   D      +  +      
Sbjct: 122 KQQYTLAQQQLDRALGEMRFPLRRAEIDLEVARTALAQLLAPPDATKIAAARAALQQAEA 181

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND- 215
                R+    +     + L +      ++      +S+  +     N  ++      D 
Sbjct: 182 ARDRARNDASAVKTRAELALQQAQKRLIAAQAEFSAASYAAEQDKTDNRAQERLARAGDA 241

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--------------- 260
           L   E  V +  +E     + +   ++        A       LK               
Sbjct: 242 LRAAEEEVARLQIEYDTARNNEIAAVQAAEAQVMLAQTTLDELLKGPDPLKVAEARRAVA 301

Query: 261 -------EISRDLE---QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                  +   ++    Q +R   +    +  + +  E   +++   G I+     +  +
Sbjct: 302 VAELAVEQARSNIRVDPQLERAVEEAKQGVDDIRRQIEALKLVAGFNGRILAVNV-APGS 360

Query: 311 YAQQSQPL-MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
             +  +P  + + P      +   VT      V  G   ++ F  Y  +     +  +  
Sbjct: 361 VIRAGEPAFIALDPSVASDALEVLVTSSSAPLVA-GQPVSISFARYPGVTY---QGTVTS 416

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           I    S     L              +A+   +++L  G  A V       
Sbjct: 417 IPGGSSNSAAALSGYH----------IAYEPADLQLETGDAATVTVVLARR 457


>gi|261313455|ref|ZP_05952652.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261302481|gb|EEY05978.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M163/99/10]
          Length = 353

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 85/280 (30%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 81  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 140

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++        +    + +       +       D+A    A   +++   +   + 
Sbjct: 141 NTVRVDALLPRGVTT----QSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 196

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 197 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVPAVK-- 253

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I       Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 254 WIMTNFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 310

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 311 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 350


>gi|238790234|ref|ZP_04634009.1| HlyD family secretion protein [Yersinia frederiksenii ATCC 33641]
 gi|238721677|gb|EEQ13342.1| HlyD family secretion protein [Yersinia frederiksenii ATCC 33641]
          Length = 351

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 92/288 (31%), Gaps = 26/288 (9%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                L   +    S++       +V E +   R + L       +    +     +   
Sbjct: 44  AEDAELGASVVHVSSSVPGRIISLNVEENSKVQRGDLLFSIEPDLYRFRVEQAQAELKMA 103

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +   +   + +   N    + +    RA L    + L  ++ L  K  V+   ++   
Sbjct: 104 QAAQDTQQRTVVAEQSNAAITDEQIVRARANLKLATQTLARLQPLLPKGYVTVQQVDDAA 163

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
              + + + L + + +       ++                       ++       + L
Sbjct: 164 TAKHDAEVSLNQALKQSLAAEALVSTT-------------------AASEALVVARRAAL 204

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            I E+      I +P  G +V     S+  +    Q +  ++ +++  +  A     +++
Sbjct: 205 AIAERELANTQIRAPHDGRVVGLTV-SAGEFVIPDQAIFTLI-NTEHWHASAFFRETELK 262

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD--NNLQTQEY 386
           ++  G  ATV        R++  +  +E I   +S +D  N  +   Y
Sbjct: 263 NISVGDCATVYVMA---DRQRAIQGRVEGIGWGVSSEDLLNIPRGLPY 307


>gi|26991882|ref|NP_747307.1| secretion protein HlyD family protein [Pseudomonas putida KT2440]
 gi|24987003|gb|AAN70771.1|AE016721_4 membrane fusion protein [Pseudomonas putida KT2440]
          Length = 319

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 84/302 (27%), Gaps = 24/302 (7%)

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +   + L       E   +    K     ++V      +V R   +     R++   R  
Sbjct: 31  DQLPEGLSMGNGRLEATEVQIASKIPGRLAEVLVDEGDNVIRGQLLARIDTRTMEAQRSQ 90

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            E +    R   ++ Q               +   L Q E ++    L+    I ++K  
Sbjct: 91  AEAEVLRARENYAAAQ---------------ASVQLRQSELLLASQELKRVREIFQRKFA 135

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            + + +            +      L   +       +++  L    +  ++ +PI G I
Sbjct: 136 SQQLLDQQQARFDTANAAVVAARAQLAAIKAAIGAAEAQVAQLTSEIDDSSLRAPINGII 195

Query: 301 VYNQSFSSSNYAQQ-SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
              +            + LM I P  +   +   +       +  G  A +      +  
Sbjct: 196 Q-LRLAEPGEVLGAGGRVLMLIDPSDQYMNL--YLPASTSGRLTVGDQARIVLDALPERA 252

Query: 360 EKKFKAIIEKIDPIISQQ--DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                A +        +Q    + + +  + V L+++D          + G P       
Sbjct: 253 LPAKVAFVAAKAQFTPKQVETRDERQKLVFRVKLRLSDPGAVPQA---KPGMPGAGYVRT 309

Query: 418 KN 419
             
Sbjct: 310 AE 311



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/149 (10%), Positives = 45/149 (30%), Gaps = 2/149 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V+ G  +++G  L   +           +  +   R +    ++++    ++ 
Sbjct: 57  GRLAEVLVDEGDNVIRGQLLARIDTRTMEAQRSQAEAEVLRARENYAAAQASVQLRQSEL 116

Query: 125 DVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            +  +  +   E  Q      +        F+   ++V  +         +I      + 
Sbjct: 117 LLASQELKRVREIFQRKFASQQLLDQQQARFDTANAAVVAARAQLAAIKAAIGAAEAQVA 176

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             +S +         +  +   L E   V
Sbjct: 177 QLTSEIDDSSLRAPINGIIQLRLAEPGEV 205


>gi|226946647|ref|YP_002801720.1| secretion protein [Azotobacter vinelandii DJ]
 gi|226721574|gb|ACO80745.1| secretion protein [Azotobacter vinelandii DJ]
          Length = 354

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 72/241 (29%), Gaps = 13/241 (5%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L   ++ L    S        +     ++  ++ +L + E +  +    L+  + +Q  
Sbjct: 98  GLRRIAADLEQQGSRIAAAQARVAAAQAEHDFARQELKRYESLASQGAGSLQ--LAQQAR 155

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI----LEKTREQKTILSP 295
                +    E         ++    L+  Q      + +        E       I +P
Sbjct: 156 SRIGTSRAALEEARAALASEEQQVAVLQARQGEAGAALQRAGADRHHAELRLSYTRIEAP 215

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +V  +S     Y Q    L+ +VP   +  + A     Q+  V+ G    V    +
Sbjct: 216 LDG-VVGRRSVRVGAYVQPGNALLAVVPLDAVYVV-ANYQETQLTEVQPGQAVEVSVDTF 273

Query: 356 ADIREKK-----FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
                +        A      P++        T+    + +KI          +LR G  
Sbjct: 274 PGAPLRARVDSFAPATGLSFAPVVPSNATGNFTKIVQRIPVKIRFEPDQPQVEKLRVGMS 333

Query: 411 A 411
            
Sbjct: 334 V 334


>gi|193212702|ref|YP_001998655.1| putative ABC transport system, lipoprotein [Chlorobaculum parvum
           NCIB 8327]
 gi|193086179|gb|ACF11455.1| putative ABC transport system, lipoprotein [Chlorobaculum parvum
           NCIB 8327]
          Length = 307

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 87/267 (32%), Gaps = 42/267 (15%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           + +    +    +++++   +  +  ++++ R    + Q+DL     L ++ AVS   L 
Sbjct: 76  TQLALDRRQLRAQLKALLEQKPSVIAEANVYRQQRRNIQRDLDRYTRLVKEGAVSVKTLE 135

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                V      + + I    + +  IN                                
Sbjct: 136 ----NVQDQARVIDQQISAVDSKIPTIN-------------------------SQAKALR 166

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
            ++  ++    +  + +P  G ++  +           +PL +I   +   Y+R  ++  
Sbjct: 167 DQIGKVDDQITKAVVRNPAKGVVLA-KYAEPGEVVSYGKPLYRIA-DTGSMYLRVWISET 224

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS-----QQDNNLQTQEYYEVILK 392
           Q+  VK G    V          K    +I  I           Q    +    Y V + 
Sbjct: 225 QLSQVKIGQKVDVLIDE-EKAASKHLTGVITWISSKAEFTPKIIQTREDRVNMVYAVKVL 283

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + +    D  +++  G P E+ F AK+
Sbjct: 284 VENP---DGVLKI--GMPGEIRFIAKD 305


>gi|254706015|ref|ZP_05167843.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M163/99/10]
          Length = 349

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 85/280 (30%), Gaps = 21/280 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F     S  + L   L  + S      + E       A + + +  ++  K   E    
Sbjct: 77  LFEIDSRSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKAREAQISGAKAALEVAKA 136

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   ++        +    + +       +       D+A    A   +++   +   + 
Sbjct: 137 NTVRVDALLPRGVTT----QSSADTAHGNMLQAQAAVDQAEAALAVAKEDLRTIIVAREG 192

Query: 272 TFADE---MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             AD     + + +     +   IL+P  G +          Y      L+ +VP  K  
Sbjct: 193 LNADLHNAEAAVALARIDLQNTKILAPRDGKLGEVGVR-LGQYVTAGTQLVSLVPAVK-- 249

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           +I       Q+  +K G   T+        R  + K  IE   P    +     ++  T 
Sbjct: 250 WIMTNFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATGSEFSVIKSDNATG 306

Query: 385 EYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + ++     ++I+      +   L  G    V     +T
Sbjct: 307 NFTKITQRLSVRISIDEGQPDAELLAPGMSVVVRVDTAST 346


>gi|53805204|ref|YP_113073.1| HlyD family secretion protein [Methylococcus capsulatus str. Bath]
 gi|53758965|gb|AAU93256.1| HlyD family secretion protein [Methylococcus capsulatus str. Bath]
          Length = 321

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 83/256 (32%), Gaps = 14/256 (5%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
                +G +   +  +++ + + G I +  V  G  ++ G PLL  +  E    +     
Sbjct: 34  GIARGNGRLEATE--IDVGAKYGGRITEVLVYEGDDVVPGQPLLRIDTSEEQAQLQNIDA 91

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFE--SREEQLLDFLGKYHSTCSKVFNYGISS 159
            +K  R  +D     L    +  ++    F   SR  +      +         +  ++ 
Sbjct: 92  ELKRARESLDYAGQMLRVARHDLELARNIFRRSSRLVEQAAVSAEKLDRDRTELSNAVAR 151

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN--------AV 211
           +  +          I     +     S+++  +    ++  ++  L E          A+
Sbjct: 152 LDAAQSRIGEAEAGIDAVAAEKRRIESVIKESVLLAPREARVLYKLSEPGEVLPRGGKAL 211

Query: 212 SQNDLNQQERIVYKSTLELRENI--HEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +  DLN    I+Y    E  +     E + +L  + +L   A L F +   + +    + 
Sbjct: 212 TLIDLNDVYMILYLGEAEAGQAAIGGEARIVLDALPDLPLPARLVFVSPKAQFTPKQVET 271

Query: 270 QRTFADEMSKLTILEK 285
                  M +L     
Sbjct: 272 SSERQKLMFRLKAQVD 287



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 72/242 (29%), Gaps = 18/242 (7%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           LLR   S  Q  L  +    ++   S  D   Q   V +  LEL  NI  + + L     
Sbjct: 74  LLRIDTSEEQAQLQNIDAELKRARESL-DYAGQMLRVARHDLELARNIFRRSSRLVEQAA 132

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ-------KTILSPIAGT 299
           +  E        L      L+  Q    +  + +  +   + +         +L+P    
Sbjct: 133 VSAEKLDRDRTELSNAVARLDAAQSRIGEAEAGIDAVAAEKRRIESVIKESVLLAPREAR 192

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           ++Y +         +    + ++  + +  I   +   +      G  A +      D+ 
Sbjct: 193 VLY-KLSEPGEVLPRGGKALTLIDLNDVYMI-LYLGEAEAGQAAIGGEARIVLDALPDL- 249

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRNGFPAEVL 414
                A +  + P        ++T        + +  ++       +   ++ G P    
Sbjct: 250 --PLPARLVFVSPKAQFTPKQVETSSERQKLMFRLKAQVDPEFLRAHRGLVKPGMPGVAY 307

Query: 415 FT 416
             
Sbjct: 308 VK 309


>gi|50084348|ref|YP_045858.1| putative RND transporter, membrane fusion protein [Acinetobacter
           sp. ADP1]
 gi|49530324|emb|CAG68036.1| putative RND transporter, membrane fusion protein [Acinetobacter
           sp. ADP1]
          Length = 402

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 74/188 (39%), Gaps = 9/188 (4%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           + + G +L   ++V+++S  +G+++K   + G  + +G  L+  +       +   + + 
Sbjct: 72  IKAIGTVLP-THLVKVQSQVAGVLQKIYFKEGQYVSKGQLLVQIDPAPFQVALAQAQGTQ 130

Query: 104 KNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +     +   ++E +    L  +  +  +  E ++  +    G+  +  ++V    +   
Sbjct: 131 QQNLAQLRNAESELARYQLLFKQDSIARQQVEQQQALVNQLKGQVQANQAQVDAAKLQLS 190

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y  +   +                 +L++A   +    +T +  ++ + A+++N L+   
Sbjct: 191 YTKIYAPIEGRVGFKQKDTG-----NLIQANEDAGLVSITQVHPIYVQFAIAENYLDMLR 245

Query: 221 RIVYKSTL 228
             + K   
Sbjct: 246 ASLQKGEQ 253



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 86/232 (37%), Gaps = 22/232 (9%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSH------QKDLTMMKNLFEKN-AVSQNDLNQQ---- 219
           +R I + R DL+ +   +  +L +H      Q    + K  F++   VS+  L  Q    
Sbjct: 58  VRVISVQRNDLQFEIKAIGTVLPTHLVKVQSQVAGVLQKIYFKEGQYVSKGQLLVQIDPA 117

Query: 220 --ERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLKEISRDLEQNQRTFAD 275
             +  + ++    ++N+ + +N    +   +L  + +      +++    + Q +     
Sbjct: 118 PFQVALAQAQGTQQQNLAQLRNAESELARYQLLFKQDSIARQQVEQQQALVNQLKGQVQA 177

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAK 333
             +++   +       I +PI G + + Q  +  N  Q ++   L+ I       Y++  
Sbjct: 178 NQAQVDAAKLQLSYTKIYAPIEGRVGFKQKDT-GNLIQANEDAGLVSIT-QVHPIYVQFA 235

Query: 334 VTPKQIQHVKKGYTA--TVRFPHYADIREKKF-KAIIEKIDPIISQQDNNLQ 382
           +    +  ++        V+   +    +K+     +E  D  I      L+
Sbjct: 236 IAENYLDMLRASLQKGEQVKVSAWDRAEKKQLATGYVEAFDNQIDTNTGTLK 287


>gi|332882840|ref|ZP_08450451.1| hypothetical protein HMPREF9074_06263 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332679342|gb|EGJ52328.1| hypothetical protein HMPREF9074_06263 [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 309

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/288 (17%), Positives = 103/288 (35%), Gaps = 32/288 (11%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +E Q ++   K      +V       V  ++     +  +       + ++  + +A L 
Sbjct: 49  QEGQTINEGQKVGQINVEVLKLQKQQVEATIASLKEKTLNPDDQAALIRSQYEVQKAQLE 108

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q++L  ++ L    A +Q  L+    +V +   +L    ++ K  L +I+        
Sbjct: 109 QQQRELARVQQLVAGGAATQKQLDDLTAVVDQLRKQLSVTENQLKVSLTNISSQNRNVMS 168

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +     K                      ++    Q  I++PI GT++ N +        
Sbjct: 169 QEVPLQKNAET------------------VQAQISQGEIINPITGTVLVNYAL-KGEMQT 209

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             +PL KI  ++    ++A +T  Q+  +K G   TV     A+  +  +K  +  I   
Sbjct: 210 FGKPLYKIA-NTDTLTLKAYITGDQLPQIKLGQAVTVHTDA-AEGEQHTYKGEVTYIASK 267

Query: 374 I-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 + Q    +    Y + +K+       N+  L+ G   EVLF 
Sbjct: 268 AEFTPKTIQTKAERANLVYAIKIKV------KNDGYLKIGMYGEVLFQ 309


>gi|90409978|ref|ZP_01217995.1| hypothetical secretion protein [Photobacterium profundum 3TCK]
 gi|90329331|gb|EAS45588.1| hypothetical secretion protein [Photobacterium profundum 3TCK]
          Length = 384

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 89/286 (31%), Gaps = 41/286 (14%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   +    + LK    ++     +    + K S   A   + +   + +  + +K  V+
Sbjct: 109 YEIALKEAEQGLKRAGKQIGVQTASVAVAQAKLSDALAHQENVRSQASRVLAMVDKGIVT 168

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + D ++    +  +  ++       +     + +   +                      
Sbjct: 169 KADADKTRASLASAKAQVASASANLEQAKEQLGQTGSDNI-------------------D 209

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +  L   +   E+  + +P  G +   +      YA++ QPL+  V   +  ++ A
Sbjct: 210 IQSALLALQKAQLNVERTVVRAPAFGGVSNFRLD-EGYYAREGQPLLTFV-SGEDIWLEA 267

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--------------PIISQQD 378
                 + +V+ G    V            FK  +  ID                +  Q 
Sbjct: 268 YFRENSLGNVQAGNNVEV---ALDYAPGDVFKGQVISIDYGVNWGESSQAGQLASVGAQT 324

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             L+  + + V+++  + +       LR G  A+V+   K  +   
Sbjct: 325 GWLRQTQRFPVMIRFDNESAKG---LLRVGGQADVMVYTKEQSTMN 367



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 70/225 (31%), Gaps = 11/225 (4%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
                +L      S++ +T   +   IGL  + ++   +  + ++       +V+ +   
Sbjct: 22  PLASSSLPSKKQVSIQAITQSVLCLCIGLFVFYLVA--DRFIPNTDMARVRSHVIPVTPL 79

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I    V+    +  G  L+  +       +   +  +K     I  + +++     
Sbjct: 80  VSGSIIDVLVKPNDVVEAGDALIRIDPSNYEIALKEAEQGLKRAGKQIGVQTASVAVAQA 139

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTC-----SKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           K        E+   Q    L            +      ++S    +      +      
Sbjct: 140 KLSDALAHQENVRSQASRVLAMVDKGIVTKADADKTRASLASAKAQVASASANLEQAKEQ 199

Query: 178 RLDLENKSSLLR-ALLSSHQKDLTMMKNLFEK---NAVSQNDLNQ 218
                + +  ++ ALL+  +  L + + +        VS   L++
Sbjct: 200 LGQTGSDNIDIQSALLALQKAQLNVERTVVRAPAFGGVSNFRLDE 244


>gi|326934576|ref|XP_003213364.1| PREDICTED: rho guanine nucleotide exchange factor 18-like, partial
           [Meleagris gallopavo]
          Length = 1048

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 85/257 (33%), Gaps = 25/257 (9%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D E             +       E   +  +     +L        +Q      +  + 
Sbjct: 741 DAEEGSQTSNTTRQDDSSGVQPTVESQLVQRIQTLLQLLFSLQAVISQQDSYIELQRATM 800

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             +   Y + S   +L ++  + R+    R +L      L++ L   Q+     ++    
Sbjct: 801 VDREKQYRLQSTRGNLLLEQEKQRNFEKQREEL-MHVQKLQSQLKLEQQRWERERS---- 855

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    QQ R +  S   L+    E + +   + +  +E   +   Y  ++ R L +
Sbjct: 856 ---------QQRRELEISEAHLQRREEETRQLKEKLIQDREELERQREAYQHDLER-LRE 905

Query: 269 NQRTFADEMSKLTILEKTREQKTI---LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
            QR    E  +L  L K ++Q T+    SP  G     QS S S   +  +      P  
Sbjct: 906 AQRAVEKERERLDQLRKLKKQNTVSGTFSPELGQ-NPMQSHSVSFNGEGGE------PSP 958

Query: 326 KLTYIRAKVTPKQIQHV 342
            +    A+V+   + ++
Sbjct: 959 PVLKASARVSVSGMDYL 975



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 52/171 (30%), Gaps = 5/171 (2%)

Query: 88  EDIETTDLIDLKKVS-IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           +       ++ + V  I+ L   + + ++ +   ++  ++       RE+Q      + +
Sbjct: 756 DSSGVQPTVESQLVQRIQTLLQLLFSLQAVISQQDSYIELQRATMVDREKQYRLQSTRGN 815

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS----HQKDLTMM 202
               +            L         + L +   E + S  R  L       Q+     
Sbjct: 816 LLLEQEKQRNFEKQREELMHVQKLQSQLKLEQQRWERERSQQRRELEISEAHLQRREEET 875

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + L EK    + +L +Q          LRE     +     +++L      
Sbjct: 876 RQLKEKLIQDREELERQREAYQHDLERLREAQRAVEKERERLDQLRKLKKQ 926


>gi|325687847|gb|EGD29867.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK72]
          Length = 421

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 60/150 (40%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL           +  ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYVTEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNALKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADNEVTTAQIEAEKAQVTAQTES 208


>gi|300920041|ref|ZP_07136500.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 115-1]
 gi|300412988|gb|EFJ96298.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 115-1]
          Length = 293

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 88  AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 146

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 147 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 204

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 205 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 261

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 262 VYRLRIVVTDADDA-----LRQGMPVTV 284


>gi|194218419|ref|XP_001916972.1| PREDICTED: similar to CDC42 binding protein kinase gamma
           (predicted) [Equus caballus]
          Length = 1549

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 65/201 (32%), Gaps = 8/201 (3%)

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHID-TEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           P + F    ++   +     +  L   +   E+   +      + L+   + RE + L  
Sbjct: 392 PFVGFTYTSSSPSPESSSEQVAALEQRLRCLEQEKTELSRKLQEALQMPSDHRELEQL-- 449

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                    +     +S + R  K  +++         DL+ +   L   L+  Q  L M
Sbjct: 450 -----RKEVQTLQDRLSEMLRESKAPVSQTEGSPGQHSDLQQERDRLLQELAEAQTRLQM 504

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +    +    Q +L Q+ +   +             + L    +   E   + A   +E
Sbjct: 505 QEQELGRAQGRQEELLQRLQEAQEREASTASQTQALNSQLEEARDARRELQAQVATLSRE 564

Query: 262 ISRDLEQNQRTFADEMSKLTI 282
           + R     +R+   E S++  
Sbjct: 565 VRRLQRDQERSLEKEPSQVKT 585



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 65/216 (30%), Gaps = 27/216 (12%)

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY--GISS 159
            ++ LR  + T +  L  +  +        E    Q  D   +      ++      +  
Sbjct: 445 ELEQLRKEVQTLQDRLSEMLRESKAPVSQTEGSPGQHSDLQQERDRLLQELAEAQTRLQM 504

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENK----SSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             + L     R   +     + + +    +S  +AL S  ++     + L  + A    +
Sbjct: 505 QEQELGRAQGRQEELLQRLQEAQEREASTASQTQALNSQLEEARDARRELQAQVATLSRE 564

Query: 216 LNQQERIVYKSTL---------------------ELRENIHEQKNMLRHINELYDEANLE 254
           + + +R   +S                       E R    + +  +  +    ++A   
Sbjct: 565 VRRLQRDQERSLEKEPSQVKTVHTTSETNGTGXPESRPQEAQLRKEVAALRVQLEQARSH 624

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +  +E    L++  R  + E  +L    +   Q 
Sbjct: 625 GPSGKEEALCRLQEENRRLSQEQERLVEELERELQS 660



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 62/203 (30%), Gaps = 23/203 (11%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E+       +  +  LR  ++  +S       +     +    R  Q  + L +      
Sbjct: 599 ESRPQEAQLRKEVAALRVQLEQARSHGPSGKEEALCRLQEENRRLSQEQERLVEELEREL 658

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +           S      ++  I     D +     L+AL +   ++L  ++N+  +  
Sbjct: 659 QSKQRLEGERQESESNWEAQLADILSWVNDEKVSRGYLQALATKMAEELESLRNVGTQTL 718

Query: 211 VSQN-----DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            ++         + +++   + LEL+  +  +    + + E                   
Sbjct: 719 PTRPLDHQWKARRLQKMEASARLELQSALEAEIRAKQSLQER------------------ 760

Query: 266 LEQNQRTFADEMSKLTILEKTRE 288
           L Q Q       S+L   EK  +
Sbjct: 761 LTQAQEAQLQAESRLQEAEKQNQ 783


>gi|170729168|ref|YP_001763194.1| RND family efflux transporter MFP subunit [Shewanella woodyi ATCC
           51908]
 gi|169814515|gb|ACA89099.1| efflux transporter, RND family, MFP subunit [Shewanella woodyi ATCC
           51908]
          Length = 385

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 85/227 (37%), Gaps = 26/227 (11%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I  ++ +SG +     +  I+S  +GI+ +  V+ G  + +G  L+  +       +  
Sbjct: 41  KINDTILASGNLRFASEIQ-IRSEVTGIVDQVYVKEGQLVEKGDLLMELDPEIFIAEVRK 99

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            + S++     I                       R E+L +   +      ++   G++
Sbjct: 100 ARASVEIQLIEIQ----------------------RLEELANEAARRAGQYRELLGKGLT 137

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLN 217
               +     ++++   +N    +      +A+L+  Q  L   + +      +S  D+ 
Sbjct: 138 D-QDTAAQLQSQLKVAKINVRAAKQGLEQYKAILAQSQSRLDKSRFHAAIDGLISTVDIK 196

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELY-DEANLEFANYLKEIS 263
           + E ++  +T  +   +    ++  ++ ++  DEA++      +E+ 
Sbjct: 197 EGETVIAGTTNIIGSPLMTLADVDSYVAQIRVDEADVANIELGQEVE 243



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 79/282 (28%), Gaps = 28/282 (9%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL-SSHQKDLT 200
             K + T     N   +S  +        +  +Y+    L  K  LL  L       ++ 
Sbjct: 39  EDKINDTILASGNLRFASEIQIRSEVTGIVDQVYVKEGQLVEKGDLLMELDPEIFIAEVR 98

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             +   E   +    L +      +   + RE +   K +         ++ L+ A    
Sbjct: 99  KARASVEIQLIEIQRLEELANEAARRAGQYRELLG--KGLTDQDTAAQLQSQLKVAKINV 156

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-----S 315
             ++   +  +        L   +   ++    + I G I                    
Sbjct: 157 RAAKQGLEQYKAI------LAQSQSRLDKSRFHAAIDGLISTVDIKEGETVIAGTTNIIG 210

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI-I 374
            PLM +         + +V    + +++ G    V       +      A + +I  I  
Sbjct: 211 SPLMTLA-DVDSYVAQIRVDEADVANIELGQEVEVFAAATPQM------ASLGRISSIST 263

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           S + + +    YY+V + +    F+        G        
Sbjct: 264 SARKDGVNKGLYYKVEVMLQKEQFA------YPGMSCRAEIV 299


>gi|127511187|ref|YP_001092384.1| secretion protein HlyD family protein [Shewanella loihica PV-4]
 gi|126636482|gb|ABO22125.1| secretion protein HlyD family protein [Shewanella loihica PV-4]
          Length = 368

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 65/221 (29%), Gaps = 24/221 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + F   + +    L+       +        +      R  +++ +K++   + L  K 
Sbjct: 90  PRPFELAVKAAKFDLQQAAQSYEADSAAISVAQANEVAARVKVNNAKKNVERNRVLANKG 149

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +SQ        ++     EL             + +   E      +            
Sbjct: 150 TISQ-------AVMDNIIAELETAQAGLAQASSALEKAKQEFGPRGID------------ 190

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                  +++            + +P  G I      +  +YA   QPL+  + ++   +
Sbjct: 191 NPEIQSVLNRQEQALLNLNHTKLTAPANGVITNMDV-AVGDYAAAGQPLLTFI-NNNNLW 248

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           + A V    + H+K G    + F        + ++  I  I
Sbjct: 249 LTAMVRENSLAHLKPGDKVKIVFDA---TPGEVYEGKISSI 286



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/170 (9%), Positives = 48/170 (28%), Gaps = 4/170 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +  +  T      +  L  W   L  +     + +      ++ I    SG I +  + N
Sbjct: 18  SQARSFTYYIFALVAAL--WLYTLWADRMTPMTDQARVNGQLIRISPEVSGPISQVLITN 75

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
            S +  G  L+T +       +   K  ++        E  +      + + +    +  
Sbjct: 76  NSIVKAGDELVTIDPRPFELAVKAAKFDLQQ--AAQSYEADSAAISVAQANEVAARVKVN 133

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             +      +  +    +    + ++   L+     +          + +
Sbjct: 134 NAKKNVERNRVLANKGTISQAVMDNIIAELETAQAGLAQASSALEKAKQE 183


>gi|301020450|ref|ZP_07184541.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 69-1]
 gi|300398715|gb|EFJ82253.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 69-1]
          Length = 355

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 73/201 (36%), Gaps = 7/201 (3%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAVVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSTVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQ 218
           ++   +   E    ++  +  
Sbjct: 187 NIIQAQPRVEAAQATERRIAA 207


>gi|300772314|ref|ZP_07082184.1| ABC superfamily ATP binding cassette transporter membrane fusion
           efflux protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300760617|gb|EFK57443.1| ABC superfamily ATP binding cassette transporter membrane fusion
           efflux protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 329

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 92/267 (34%), Gaps = 14/267 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+K  V  G  + +G  L+  E  E T   +  K ++       +  +      + + 
Sbjct: 48  GKIEKILVSEGQHVRKGDTLIMLEIPEVTAKEEQAKGALDAAEAQYEMARKGAT--DGQL 105

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L       +EQL DF  K  +  S +    +    +       + +      +  + +
Sbjct: 106 KQLNAKVAGLKEQL-DFAEKSLNRLSNLLRDSLVPQQK-YDEVYAKYQGAKNQYIAAQAE 163

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            S +R      Q+ + + +      AV++ ++  +ER +        E+I+     +  +
Sbjct: 164 LSDVRNGARVEQQRMALGQKERALGAVNEVNVAAKERFLIAPQDMTVESIN---LKVGEL 220

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                     + +        L + +     + +++ +    ++ + +   ++  I    
Sbjct: 221 ALAGYAIVNGYLDETTYFRFTLTEKKMAALRQGAEVNVRIPYKDNQVVKGSVS-YIKALN 279

Query: 305 SFSSSNYAQQS----QPLMKI--VPHS 325
           S+++   A       + L +I  VP  
Sbjct: 280 SYANIATAYPDFDQQESLFEIKVVPTD 306


>gi|68171398|ref|ZP_00544791.1| secretion protein, HlyD family [Ehrlichia chaffeensis str. Sapulpa]
 gi|67999193|gb|EAM85850.1| secretion protein, HlyD family [Ehrlichia chaffeensis str. Sapulpa]
          Length = 37

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIF 438
           +  G   EV    ++ TL   +  PIT  + K F
Sbjct: 1   MYPGMLTEVFIITQSRTLFNYVFTPITSTFEKAF 34


>gi|317487167|ref|ZP_07945968.1| efflux pump membrane protein [Bilophila wadsworthia 3_1_6]
 gi|316921568|gb|EFV42853.1| efflux pump membrane protein [Bilophila wadsworthia 3_1_6]
          Length = 408

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 76/242 (31%), Gaps = 16/242 (6%)

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L+A L   +  + M +    + A +        +       EL+    +++N    +   
Sbjct: 123 LQAQLRETEAAIRMRRVDLRQKADNLTRREALGKAKAIGAEELKHARDDRENAAVALAAA 182

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            +E N   A  L     +    ++  A+       L+    + T+LSP AG I      +
Sbjct: 183 EEERNALAAVLLDTGLAEQPAVRQAAANVRDCWLALQ----RTTVLSPAAGQIAKRGVQA 238

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY--ADIREKKFKA 365
                    PLM ++P     +I A     Q+  ++ G  A +R   Y        +   
Sbjct: 239 -GEVVSPGTPLMTVIPLH-RLWIDANFKEVQLHKMRIGQPAVIRVDMYGGDVTYHGRVTG 296

Query: 366 -IIEKIDPIISQQDNNLQTQ-----EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                          N         +   V ++I      ++   L  G  A V     +
Sbjct: 297 FSAGTGSAFSLLPPQNATGNWIKIVQRVPVRIEIDPADLREH--PLLVGLSAVVKVDTSD 354

Query: 420 TT 421
           T+
Sbjct: 355 TS 356


>gi|256221435|ref|NP_071796.2| plectin isoform 1 [Rattus norvegicus]
          Length = 4687

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1483 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1542

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1543 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1595

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1596 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1654

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1655 AELALRVKAEAEAAREKQR 1673



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2323 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2376

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2377 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2436

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2437 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2493

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2494 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2542



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2460 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2519

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2520 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2577

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2578 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2637

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2638 EKDSLLQRERFIEQ 2651



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 67/200 (33%), Gaps = 12/200 (6%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + + LR  +  E+ A      + D  ++  E+  E       +  +   +       
Sbjct: 1775 QLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1834

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLN 217
               R L     + R        L  +  L+R  L +  +     + L E+     Q++  
Sbjct: 1835 EKQRQLAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEAT 1884

Query: 218  QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               +   +   EL +   E + +L       +E+        + +  +     R  A+E 
Sbjct: 1885 AATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEA 1943

Query: 278  SKLTILEKTREQKTILSPIA 297
            ++L  L +  +++  L+   
Sbjct: 1944 ARLRALAEEAKRQRQLAEED 1963



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2372 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2431

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2432 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2491

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2492 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2551

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2552 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2582



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1481 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1540

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1541 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1600

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1601 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1660

Query: 291  T 291
             
Sbjct: 1661 V 1661



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1691 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1750

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1751 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1810

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1811 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1870

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1871 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1914



 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1976 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 2035

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 2036 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 2095

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 2096 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2155

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2156 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2193



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1596 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1649

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1650 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1707

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1708 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1765

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1766 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1797


>gi|118103307|ref|XP_418249.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 1012

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 82/239 (34%), Gaps = 32/239 (13%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +     D   ++      L   I T    L  L       +   E +   ++D   +Y  
Sbjct: 620 DTTRQDDSSGIQPTIESQLVQRIQTLLQLLFSLQAVISQQDSYIEVQRATMVDREKQY-- 677

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                    + S   ++ ++  + R+    R +L N    L++ L   Q+     ++   
Sbjct: 678 --------RLQSTRGNVLLEQEKQRNFEKQREELMN-VQKLQSQLKLEQQRWERERS--- 725

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                     QQ+R +  S   L+    E + +   + +   E   +   Y  ++ R L 
Sbjct: 726 ----------QQQRELEISEAHLQRREEETRQLKDKLIQDRKELERQREAYQHDLER-LR 774

Query: 268 QNQRTFADEMSKLTILEKTREQKTI---LSPIAGTIVYNQSFSS---SNYAQQSQPLMK 320
           + QR    E  +L  L K ++Q T+    SP  G     QS          + S P++K
Sbjct: 775 EAQRAVEKERERLDQLRKLKKQNTVSGTFSPELGQ-NPMQSHPVSFNGEGVEPSLPVLK 832


>gi|332883819|gb|EGK04099.1| hypothetical protein HMPREF9456_01127 [Dysgonomonas mossii DSM
           22836]
          Length = 299

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 99/283 (34%), Gaps = 33/283 (11%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++      +  QL    G+       +       +Y      LT   ++   R+D+  + 
Sbjct: 38  IVSAEANGKIMQLNFIEGQQVEQGRPLGYIDTVQLYLKKMQLLTNTSAVKSGRVDIPRQI 97

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           + ++  +++ + +    +NL + NA +Q  L+     +     +L       +N  ++I+
Sbjct: 98  AAIKQQIATQKNEQKRFENLVKANAANQKQLDDINAQILVLERQLTAQTELLENSNKNIS 157

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E      ++ A                          +    ++  I SPI GTI+  + 
Sbjct: 158 EQSSGLGVQVAQ-------------------------INDQIQKSIISSPINGTILS-KY 191

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A Q + L K V   +  ++RA +T  Q+  VK G    V +  +     K++  
Sbjct: 192 AEQGELATQGRALFK-VADIEHMFLRAYITASQLTQVKIGQAVKV-YADFGGKEMKEYSG 249

Query: 366 IIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            I  I         + Q  + +    Y V + + +  +    +
Sbjct: 250 TITWISDKSEFTPKTIQTRDERANLVYAVKVAVKNDGYLKYGM 292



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 74/210 (35%), Gaps = 11/210 (5%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET---TDLIDLKKVS 102
           +SG  + E   V + +  +G I +     G Q+ QG PL   + ++       +     +
Sbjct: 28  ASG--VFETTEVIVSAEANGKIMQLNFIEGQQVEQGRPLGYIDTVQLYLKKMQLLTNTSA 85

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +K+ R  I  + +A+          +K FE+  +       +     +++       +  
Sbjct: 86  VKSGRVDIPRQIAAIKQQIATQKNEQKRFENLVKANAANQKQLDDINAQILVLE-RQLTA 144

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
             ++     ++I      L  + + +   +        +   +  K    Q +L  Q R 
Sbjct: 145 QTELLENSNKNISEQSSGLGVQVAQINDQIQKSIISSPINGTILSK-YAEQGELATQGRA 203

Query: 223 VYK-STLE---LRENIHEQKNMLRHINELY 248
           ++K + +E   LR  I   +     I +  
Sbjct: 204 LFKVADIEHMFLRAYITASQLTQVKIGQAV 233


>gi|149066132|gb|EDM16005.1| rCG59523, isoform CRA_c [Rattus norvegicus]
          Length = 4687

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1483 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1542

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1543 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1595

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1596 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1654

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1655 AELALRVKAEAEAAREKQR 1673



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2323 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2376

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2377 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2436

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2437 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2493

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2494 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2542



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2460 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2519

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2520 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2577

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2578 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2637

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2638 EKDSLLQRERFIEQ 2651



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 67/200 (33%), Gaps = 12/200 (6%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + + LR  +  E+ A      + D  ++  E+  E       +  +   +       
Sbjct: 1775 QLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1834

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLN 217
               R L     + R        L  +  L+R  L +  +     + L E+     Q++  
Sbjct: 1835 EKQRQLAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEAT 1884

Query: 218  QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               +   +   EL +   E + +L       +E+        + +  +     R  A+E 
Sbjct: 1885 AATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEA 1943

Query: 278  SKLTILEKTREQKTILSPIA 297
            ++L  L +  +++  L+   
Sbjct: 1944 ARLRALAEEAKRQRQLAEED 1963



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2372 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2431

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2432 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2491

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2492 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2551

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2552 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2582



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1481 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1540

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1541 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1600

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1601 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1660

Query: 291  T 291
             
Sbjct: 1661 V 1661



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1691 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1750

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1751 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1810

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1811 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1870

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1871 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1914



 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1976 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 2035

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 2036 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 2095

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 2096 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2155

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2156 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2193



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1596 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1649

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1650 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1707

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1708 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1765

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1766 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1797


>gi|104780503|ref|YP_607001.1| efflux transporter, membrane fusion protein [Pseudomonas
           entomophila L48]
 gi|95109490|emb|CAK14191.1| putative efflux transporter, membrane fusion protein [Pseudomonas
           entomophila L48]
          Length = 289

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 76/224 (33%), Gaps = 34/224 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN------ 269
           L   +R  +++  +    + E +     + +   EA    A   + IS +L +N      
Sbjct: 71  LMTIDRERFQAAFDQASAVVETRTQQLRLRDR--EAARRTALGTEAISAELRENAQINAA 128

Query: 270 --QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +    +  ++L +      +  + +P  G I   +  +  N+    Q +M +V     
Sbjct: 129 VARGELHEAEAQLQVARINLARSEVRAPRGGHITNLRL-AEGNFVNTGQSVMALV-DDAT 186

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--- 384
            YI+A     ++  ++ G T  V      +      +  +E I   I+ +++    Q   
Sbjct: 187 FYIQAYFEETKLPRIRVGDTVNVWLMGAGES----MQGHVESISRGITDRNSTPDGQLLP 242

Query: 385 ------------EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                       +   V +++  +      + L  G  A V   
Sbjct: 243 EVEPTFNWVRLAQRIPVRIRLDQI---PEGVTLSAGMTASVQVH 283



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 53/186 (28%), Gaps = 14/186 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSI--LLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           R    +L  + ++ +    G   W    L P         +++       I    SG + 
Sbjct: 2   RTAVRTLVTLCVVILAVFAGYQLWQYYMLTPWTRDARVRADVVV------IAPDVSGWVS 55

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLID------LKKVSIKNLRCHIDTEKSALDFLNN 122
             +V +  Q+  G  L+T +        D        +     LR      ++AL     
Sbjct: 56  ALKVRDNQQVKAGELLMTIDRERFQAAFDQASAVVETRTQQLRLRDREAARRTALGTEAI 115

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             ++ E A  +      +             N   S V       +T +R    N ++  
Sbjct: 116 SAELRENAQINAAVARGELHEAEAQLQVARINLARSEVRAPRGGHITNLRLAEGNFVNTG 175

Query: 183 NKSSLL 188
                L
Sbjct: 176 QSVMAL 181


>gi|15599787|ref|NP_253281.1| hypothetical protein PA4591 [Pseudomonas aeruginosa PAO1]
 gi|9950840|gb|AAG07979.1|AE004873_1 hypothetical protein PA4591 [Pseudomonas aeruginosa PAO1]
          Length = 425

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 55/435 (12%), Positives = 122/435 (28%), Gaps = 108/435 (24%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILL------------------PIEISVSSSGEILN 52
           R        + L   + ++  + W +                    P+   +   G +  
Sbjct: 5   RFSFLRRPALPLAVGLAVVAALAWLVFAGGTAKRTEGERWVAVRAAPLVHQIGLVGRLEP 64

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
              VV + +PF+G ++   VE G ++ +G  LL  +  E    +   + ++   R  +  
Sbjct: 65  -GRVVTLAAPFAGNVEALLVEPGQRVAEGQELLRMDTREIAVQVREAQSALLKARRTLQD 123

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +                                                 +      +R
Sbjct: 124 LRDW------------------------------------------ERGEDMARVRRALR 141

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           S  L +   E K    R L          + +L ++ +  + DL    R V  +  + + 
Sbjct: 142 SAQLAQSSTERKLRETRELFQRGIVPRNELDDLEQQASQQRMDLEAARREVESTRAKGQG 201

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   M                        DL      +    ++L         +T+
Sbjct: 202 ENRQIAEM------------------------DLANASVKYETLQAQLDG-------RTV 230

Query: 293 LSPIAGTIVYN----------QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +P AG +V            +   + +   Q Q L  +    +   + AKV+   I  +
Sbjct: 231 RAPFAGIVVAAPGLAGEQGSREPVQAGSKLGQGQALFGLA-SVERLKVSAKVSELDINQL 289

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           ++G    +    +          +I  +            + ++ EV + +  L      
Sbjct: 290 REGQAVEISGDGFEGTT---LAGVIAALGGQALPGMAQGGSPQF-EVTVSVAPLDPRQLQ 345

Query: 403 IELRNGFPAEVLFTA 417
            ++R G  A++  T 
Sbjct: 346 -KIRLGMSAKLTVTT 359


>gi|20807655|ref|NP_622826.1| membrane-fusion protein [Thermoanaerobacter tengcongensis MB4]
 gi|254479342|ref|ZP_05092679.1| efflux transporter, RND family, MFP subunit [Carboxydibrachium
           pacificum DSM 12653]
 gi|20516200|gb|AAM24430.1| Membrane-fusion protein [Thermoanaerobacter tengcongensis MB4]
 gi|214034708|gb|EEB75445.1| efflux transporter, RND family, MFP subunit [Carboxydibrachium
           pacificum DSM 12653]
          Length = 390

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 84/249 (33%), Gaps = 24/249 (9%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           R + L   DL  +  + +  L   Q  L  +KNL +K          Q       T  L 
Sbjct: 89  RLLELETQDLSIQYQIAKKQLEMAQIQLEALKNLKQK----------QTEQSQIPTPSLP 138

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +     +  + H  +   +     ++   +    L++ Q   A+   K       + QK 
Sbjct: 139 QQAPASEQSIPH--QTQAQFQQPTSSLSLDDQIKLQEKQVEIAELNLKSIQQNMNKMQKY 196

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +   GT+    +  ++ +     P +  V   +   +   V P    ++ +G  A + 
Sbjct: 197 VTADFDGTVTSLNAKENNYFTSTQFPAIT-VEDLQNLQVVLDVNPYDAVNLSEGQQAYIH 255

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           F        K F+  + KI P   +  +        +V + I      +N+  ++ GF  
Sbjct: 256 FA------GKTFEGKVNKISPTAVKVMSQTGGDSVVKVYVDI-----LNNDGTIKPGFKV 304

Query: 412 EVLFTAKNT 420
           +V       
Sbjct: 305 DVDIKIGEK 313



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 50/129 (38%), Gaps = 3/129 (2%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + K  V  G Q+ +G  LL  E  + +    + K  ++  +  ++  K+       +  +
Sbjct: 73  VLKVYVSVGDQVKKGDRLLELETQDLSIQYQIAKKQLEMAQIQLEALKNLKQKQTEQSQI 132

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGIS-SVYRSLKMKLTRMRSIYLNRLDLENKS 185
              +    ++         H T ++      S S+   +K++  ++    LN   ++   
Sbjct: 133 PTPSL--PQQAPASEQSIPHQTQAQFQQPTSSLSLDDQIKLQEKQVEIAELNLKSIQQNM 190

Query: 186 SLLRALLSS 194
           + ++  +++
Sbjct: 191 NKMQKYVTA 199


>gi|110644440|ref|YP_672170.1| multidrug resistance protein MdtN [Escherichia coli 536]
 gi|191171925|ref|ZP_03033470.1| multidrug resistance protein MdtN [Escherichia coli F11]
 gi|300994935|ref|ZP_07180989.1| efflux pump membrane protein [Escherichia coli MS 200-1]
 gi|110346032|gb|ABG72269.1| putative HlyD family secretion protein YjcR [Escherichia coli 536]
 gi|190907690|gb|EDV67284.1| multidrug resistance protein MdtN [Escherichia coli F11]
 gi|300304907|gb|EFJ59427.1| efflux pump membrane protein [Escherichia coli MS 200-1]
 gi|324015790|gb|EGB85009.1| efflux pump membrane protein [Escherichia coli MS 60-1]
          Length = 343

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGIDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGIDALVAQRAAVEADIALTK 203


>gi|294085575|ref|YP_003552335.1| secretion protein HlyD [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292665150|gb|ADE40251.1| secretion protein HlyD [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 431

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 78/246 (31%), Gaps = 39/246 (15%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +   ++  LE + +  RA L   +K L +   L + N  +  +L Q +     + ++L +
Sbjct: 147 AQKQSKGTLEEELAAARANLVVTEKRLAIANELAKDNFTAPLELAQLKADYQNARVQLAK 206

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               Q                   NY  E+  ++ QN        + L  LE   E  T+
Sbjct: 207 IETAQ-------------------NYRSEL--EVAQNMARVEAARASLAALETQLEDSTV 245

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +SP++G +            ++      I+    L+ I A V    I  +  G    V  
Sbjct: 246 ISPVSGLLETLHV-EKGERMRRDAAAATILGMDTLSVIVA-VPQNDIAQISVGDMVDVNI 303

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                      K  + KI    +                   +++  + + +LR G   E
Sbjct: 304 AG-----AGTNKGKVTKIASRSNPATRTFDV-----------EVSLQNKDRKLRGGVTVE 347

Query: 413 VLFTAK 418
                 
Sbjct: 348 ASIDVG 353



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 31/174 (17%)

Query: 40  IEISVSSSGE------ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           I  +V ++G       +     V         II       GS+I  G  L+  +     
Sbjct: 75  ITRTVRANGVSEAAFDVTVSSKV------DGNII-DIPATEGSEIKLGDVLIVLDKGTLP 127

Query: 94  DLIDL---------------KKVSIKNLRCHIDTEKSALDFLNNKYDV---LEKAFESRE 135
           + I                 +K S   L   +   ++ L     +  +   L K   +  
Sbjct: 128 EQIAAAKAELNAAEKSYDAAQKQSKGTLEEELAAARANLVVTEKRLAIANELAKDNFTAP 187

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            +L      Y +   ++     +  YRS       M  +   R  L    + L 
Sbjct: 188 LELAQLKADYQNARVQLAKIETAQNYRSELEVAQNMARVEAARASLAALETQLE 241


>gi|294670332|ref|ZP_06735215.1| hypothetical protein NEIELOOT_02051 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307936|gb|EFE49179.1| hypothetical protein NEIELOOT_02051 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 392

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 16/144 (11%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLP---------------IEISVSSSGEILNEDNVVEI 59
            ++K + + ++  +     WS   P               I  +VS++GEI    N+V +
Sbjct: 4   KTVKWIAIPAVALVAAYSVWSYFQPEPQTSYITETVKRGDISQTVSATGEISPS-NLVSV 62

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
            +  SG IKK  V+ G Q+ +G  +         + ++ +K  ++  +  + + + AL+ 
Sbjct: 63  GAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQVNTLNTEKSKLETYQAKLVSAEIALNS 122

Query: 120 LNNKYDVLEKAFESREEQLLDFLG 143
              KY      ++       D   
Sbjct: 123 AEKKYKREAALWKENATSKEDLES 146



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 97/283 (34%), Gaps = 33/283 (11%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA--LLSSHQKDL 199
           + +  S   ++    + SV      ++ ++      ++   +  + + +   +++   + 
Sbjct: 44  ISQTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQVNTLNTEK 103

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           + ++    K   ++  LN  E+   +     +EN   ++++     E   +A       +
Sbjct: 104 SKLETYQAKLVSAEIALNSAEKKYKREAALWKENATSKEDL-----ESAQDALAAAKANV 158

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY--AQQSQP 317
            E+   ++Q + +           E       I++ + GT+V             Q +  
Sbjct: 159 AELKAAIKQTKISI-------NTAESELGYTRIVATMDGTVVAIPVEEGQTVNAVQSTPT 211

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++++  +      + ++    I  VK G    + F   ++      KA ++ +DP ++  
Sbjct: 212 IIQLA-NLDTMLNKMQIAEGDITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTM 267

Query: 378 DNNLQTQE--------YYEVILKITDLAFSDNNIELRNGFPAE 412
                T          YY     + +    D  + +  G   +
Sbjct: 268 SLGSYTTSTDTTSNAIYYYARALVPNP---DGKLSI--GMTTQ 305


>gi|256421943|ref|YP_003122596.1| secretion protein HlyD family protein [Chitinophaga pinensis DSM
           2588]
 gi|256036851|gb|ACU60395.1| secretion protein HlyD family protein [Chitinophaga pinensis DSM
           2588]
          Length = 310

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 75/237 (31%), Gaps = 13/237 (5%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            + L +   E   S LR   +  Q  L +++            L  +++       E   
Sbjct: 68  GLTLQKEQTEATISALREKTTDPQPQLALVRKQLAIQEAQLKQLLHEQKRTENLVKEDAA 127

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD---EMSKLTILEKTREQ 289
              +  +M   I+++  +            +    QN+   ++       L   +    +
Sbjct: 128 TPKQLDDMNASIDQMQKQILATRQQLTVSETNVANQNRSVLSEKGPLQKSLARYDDEIGK 187

Query: 290 KTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             + +P+ GT++               + L KI   +    ++A +T  Q+  +K G   
Sbjct: 188 GVVANPVKGTVLARYALQGEMAVI--GKALYKIA-DTDTLLLKAYITGTQLPAIKLGQHV 244

Query: 349 TVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSD 400
            V      +   K +  +I  I         + Q    +    Y + +++ +  +  
Sbjct: 245 KVLIDA-GEKEYKSYPGVISYISSKSEFTPKTIQTKEERANLVYAIKVRVPNDGYLK 300



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 65/169 (38%), Gaps = 4/169 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G    ++  V + +  +G +  F  + G  + +G  +   +    T   +  + +I  
Sbjct: 25  AQGNFEADE--VIVSAQQNGQLLSFTAKEGDTLAKGAIVGQIDVNGLTLQKEQTEATISA 82

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           LR      +  L  +  +  + E   +    E++  + L K  +   K  +   +S+ + 
Sbjct: 83  LREKTTDPQPQLALVRKQLAIQEAQLKQLLHEQKRTENLVKEDAATPKQLDDMNASIDQM 142

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            K  L   + + ++  ++ N++  + +     QK L    +   K  V+
Sbjct: 143 QKQILATRQQLTVSETNVANQNRSVLSEKGPLQKSLARYDDEIGKGVVA 191


>gi|40849896|gb|AAR95660.1| plectin 6 [Rattus norvegicus]
          Length = 4688

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1484 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1543

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1544 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1596

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1597 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1655

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1656 AELALRVKAEAEAAREKQR 1674



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2324 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2377

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2378 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2437

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2438 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2494

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2495 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2543



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2461 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2520

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2521 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2578

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2579 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2638

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2639 EKDSLLQRERFIEQ 2652



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 67/200 (33%), Gaps = 12/200 (6%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + + LR  +  E+ A      + D  ++  E+  E       +  +   +       
Sbjct: 1776 QLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1835

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLN 217
               R L     + R        L  +  L+R  L +  +     + L E+     Q++  
Sbjct: 1836 EKQRQLAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEAT 1885

Query: 218  QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               +   +   EL +   E + +L       +E+        + +  +     R  A+E 
Sbjct: 1886 AATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEA 1944

Query: 278  SKLTILEKTREQKTILSPIA 297
            ++L  L +  +++  L+   
Sbjct: 1945 ARLRALAEEAKRQRQLAEED 1964



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2373 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2432

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2433 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2492

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2493 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2552

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2553 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2583



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1482 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1541

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1542 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1601

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1602 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1661

Query: 291  T 291
             
Sbjct: 1662 V 1662



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1692 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1751

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1752 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1811

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1812 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1871

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1872 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1915



 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1977 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 2036

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 2037 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 2096

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 2097 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2156

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2157 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2194



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1597 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1650

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1651 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1708

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1709 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1766

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1767 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1798


>gi|37520997|ref|NP_924374.1| hypothetical protein gll1428 [Gloeobacter violaceus PCC 7421]
 gi|35211993|dbj|BAC89369.1| gll1428 [Gloeobacter violaceus PCC 7421]
          Length = 365

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 65/184 (35%), Gaps = 18/184 (9%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFED-- 89
           +   P+  +V +SG +  E  VV + +P    +  ++K  V  G ++  G  +   +   
Sbjct: 48  APSAPVVRAVVASGRLEPEGEVVRLAAPTAFEATRLEKLLVREGDRVKAGQAVAVLDRRG 107

Query: 90  ------IETTDLIDLKKVSIKNLRC-----HIDTEKSALDFLNNKYDVLEKAFESREEQL 138
                 ++    + + +  +  +R       +  +++ +D L  + ++    +E      
Sbjct: 108 RYAATVVQARSQVKVAQARLAQVRAGAKGGELAAQRAGIDRLAGELEIARTEWERYAALE 167

Query: 139 LDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            D      +  SK          + ++    +        + L+ + +    R+  +  +
Sbjct: 168 RDGAISASALDSKRLAMRTLEGQLAQARNALVATAEVRPTDVLEAQAQVEQARSAQARAE 227

Query: 197 KDLT 200
            DL 
Sbjct: 228 ADLE 231



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 82/280 (29%), Gaps = 19/280 (6%)

Query: 100 KVSIKNLRCHIDTEKSALDFL-NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           +  + + R   + E   L      +   LEK      +++              +   + 
Sbjct: 55  RAVVASGRLEPEGEVVRLAAPTAFEATRLEKLLVREGDRVKAGQAVAVLDRRGRYAATVV 114

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                +K+   R+  +       E   +  RA +     +L + +  +E           
Sbjct: 115 QARSQVKVAQARLAQVRAGAKGGE--LAAQRAGIDRLAGELEIARTEWE-------RYAA 165

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            ER    S   L       + +   + +  +           ++     + Q       S
Sbjct: 166 LERDGAISASALDSKRLAMRTLEGQLAQARNALVATAEVRPTDVL----EAQAQVEQARS 221

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                E   E   + +   G ++   ++         + + + V  +   Y  A+V   +
Sbjct: 222 AQARAEADLEVAYVRALADGQVLKIHAW-PGEVIGP-EGIAE-VGRTDRMYAVAEVYETE 278

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           I  V+ G  A  R               ++++  II+++D
Sbjct: 279 IGRVRPGQRA--RITSANGAFAGPLGGAVDQVGRIIAKKD 316


>gi|86158659|ref|YP_465444.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775170|gb|ABC82007.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 377

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/203 (11%), Positives = 59/203 (29%), Gaps = 16/203 (7%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           ++ +++ +      E           + ++  E              DL+  +       
Sbjct: 94  RRGQLLVRFDTSAEEAQLAAATADAALAKVNLERAQRLRQGEANAQADLDAAEAKAKQAD 153

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + +  L+    +KT+ +P  G I   +            P+  +       +    +  +
Sbjct: 154 AAVRNLQAIIAKKTVRAPFDGRI-SIRQVELGQVVSPGSPIASLQ-SVTPIHADFWLPQQ 211

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  +  G    +R   +       +   I  ++P +     N        V ++ T   
Sbjct: 212 ALVDLAAGQKVRLRTDTFPRA---DWTGEITTVNPEVDPVTRN--------VRVRAT--- 257

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
           F + +  LR G    V   +   
Sbjct: 258 FPNKDGRLRPGMFVNVAVLSAEK 280


>gi|83591143|ref|YP_431152.1| secretion protein HlyD [Moorella thermoacetica ATCC 39073]
 gi|83574057|gb|ABC20609.1| Secretion protein HlyD [Moorella thermoacetica ATCC 39073]
          Length = 399

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 77/251 (30%), Gaps = 40/251 (15%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             +     +         +  +  L + QK    +K L +  A SQ+ L+  +  + ++ 
Sbjct: 112 QDQAEQARIGMDSARVAIANAKVALDAAQKYYDRIKALADAGAASQSQLDDAQTKLDQAK 171

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                   + +   +                               A   + + I++   
Sbjct: 172 NGYEAANKQYEAAQKQYETASG---------------------SGLAQAEAAVNIIKVNM 210

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              +I SPI G +           A  +  QPL+ I   +    ++  V  + +  +  G
Sbjct: 211 SNASITSPITGVVTNRNIN-PGEMAAPTSPQPLLTIA-DTSTLKLQGTVGQEAVPLLSTG 268

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
              TV           +F   + ++ P+ +       T + + V + + +        EL
Sbjct: 269 QKVTVTLDALPGR---EFTGTVTQVGPVAA------TTGQRFPVEISLPNPG------EL 313

Query: 406 RNGFPAEVLFT 416
           + G  A  +F 
Sbjct: 314 KAGMTARAVFK 324



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 14/163 (8%), Positives = 54/163 (33%), Gaps = 3/163 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +  +V  +G ++       +    SG +   + + G ++  G  L+  +  E   
Sbjct: 41  ASKGKMAATVEVTGALVPARTANVVSKL-SGQVTAVKADVGDRVRAGQVLVEIDTKELQA 99

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKV 152
            +   + ++++++   +  +  +D         + A ++ ++    +  L    +     
Sbjct: 100 QLQQAEAAVRSVQDQAEQARIGMDSARVAIANAKVALDAAQKYYDRIKALADAGAASQSQ 159

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +   + + ++        +     +   E  S    A   + 
Sbjct: 160 LDDAQTKLDQAKNGYEAANKQYEAAQKQYETASGSGLAQAEAA 202


>gi|95929330|ref|ZP_01312073.1| secretion protein HlyD [Desulfuromonas acetoxidans DSM 684]
 gi|95134446|gb|EAT16102.1| secretion protein HlyD [Desulfuromonas acetoxidans DSM 684]
          Length = 480

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 77/208 (37%), Gaps = 23/208 (11%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             +  ++ +        +++   D A  E A+ L E +R   Q       ++  L   ++
Sbjct: 202 QLVSAQQELLLAARYRHNLDPKADSALRESADRLFESARIRLQRWDITTAQIDALLKRDE 261

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
            R+  T+ +P  G +V  ++       +  Q L+++       +++A++  +    V +G
Sbjct: 262 VRKTMTLYAPHNG-VVTMKNVREGEAVKAGQTLLELS-DFSQVWVQAEIYEQDRARVSEG 319

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQ-------------QDNNLQTQEYYEVILK 392
              TV  P       + +   I+ + P +                D +L+ Q + +V++ 
Sbjct: 320 LPVTVAIPG-DSRPTRGYSGRIDYLYPYVDTLTQTVQARIVLNNADGSLEPQRFVDVVIT 378

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +       N+  L     A+ +  +   
Sbjct: 379 LPP----QNDALLIP---ADAVVDSGER 399



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 3/50 (6%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +P +G++    V  G  +  G  LL   D      + ++    +  R  +
Sbjct: 270 APHNGVVTMKNVREGEAVKAGQTLLELSDF---SQVWVQAEIYEQDRARV 316


>gi|332991927|gb|AEF01982.1| cation efflux system protein [Alteromonas sp. SN2]
          Length = 484

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 53/139 (38%), Gaps = 16/139 (11%)

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++L    +  +  T  +P AG + +        Y Q    ++ I       ++ A+V  +
Sbjct: 203 AQLEKSREVSQTITFFAPQAGVVEHLGVR-EGFYVQPGTTVLSIA-RLDSVWVEARVFEQ 260

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  V      +V    +  +  K F   ++ I P +  +           + +++T   
Sbjct: 261 DVPKVALDQQVSV---TFDYLPNKTFSGKVDFIYPALDVETRT--------LKVRVT--- 306

Query: 398 FSDNNIELRNGFPAEVLFT 416
             +++ +++    A V+FT
Sbjct: 307 LKNDSGDIKPNMFANVIFT 325


>gi|292669284|ref|ZP_06602710.1| secretion protein HlyD [Selenomonas noxia ATCC 43541]
 gi|292649125|gb|EFF67097.1| secretion protein HlyD [Selenomonas noxia ATCC 43541]
          Length = 339

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/330 (13%), Positives = 103/330 (31%), Gaps = 42/330 (12%)

Query: 99  KKVSIKNLRCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++ + + LR  + T   E + ++    +   +E+ F      +             +   
Sbjct: 33  REYAAQELRAQLLTGTVEATRVEVSTKESGYIEELFLQEGMTVRAGDAAARIGRRDLDAA 92

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLD----LENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +         + +  R+   NR +       +++  RA       D      L    A+
Sbjct: 93  VLRDEAALAHAETSLQRTQSGNRAEEIRAAAERTNAARAAAEKADADYARGAELIAGGAI 152

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           SQ   +        +   LR    EQ  M                        D+   + 
Sbjct: 153 SQQAFDGLREARDTANANLRAAQQEQALMESGSR-----------------PEDIRMAEE 195

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYI 330
               + + L I        T+  P  G ++  +++    + +   P+  ++ P     ++
Sbjct: 196 DVRRQQAILEIDASAVSDLTVRVPKDGIVLS-KNYERGEFVRAGTPIATLIDPQD--VWV 252

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----PIISQQDNNLQTQE 385
           +  VT   +  ++ G  A V    Y D + +     I++I       +      N +   
Sbjct: 253 KVYVTTDVLGDLRIGNPAKV----YIDGQMEPLDGTIKEISDAAEFTLRQSITKNERANL 308

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + V + + + A       L+ G PA+V  
Sbjct: 309 VFGVKVAVDNAAGI-----LKPGMPADVDL 333



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 48/165 (29%), Gaps = 5/165 (3%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E   VE+ +  SG I++  ++ G  +  G         +    +   + ++ +    +
Sbjct: 48  TVEATRVEVSTKESGYIEELFLQEGMTVRAGDAAARIGRRDLDAAVLRDEAALAHAETSL 107

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              +S      N+ + +  A E                          ++ +     L  
Sbjct: 108 QRTQSG-----NRAEEIRAAAERTNAARAAAEKADADYARGAELIAGGAISQQAFDGLRE 162

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            R      L    +   L    S  +      +++  + A+ + D
Sbjct: 163 ARDTANANLRAAQQEQALMESGSRPEDIRMAEEDVRRQQAILEID 207


>gi|190573641|ref|YP_001971486.1| putative HlyD family secretion protein [Stenotrophomonas
           maltophilia K279a]
 gi|190011563|emb|CAQ45182.1| putative HlyD family secretion protein [Stenotrophomonas
           maltophilia K279a]
          Length = 306

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 86/241 (35%), Gaps = 25/241 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++D  G   +    V     ++  +           + L+   L+ + ++  A L+    
Sbjct: 52  IIDVEGGLIALAPPVDGSITAAPVKEGATVKKGQLLLSLDGALLQQEVAMATADLALAND 111

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L            SQ  L + ER   + +    E +          N+  D A  + A 
Sbjct: 112 RLKG----------SQAQLRELERNATRLSTGASEGVSS--------NQQADAAKQQLAG 153

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
              ++  D+   Q   A    KL       +Q ++ +P AGT+V  Q      + Q  +P
Sbjct: 154 VRADV--DVAGAQVDLAQ--HKLEHARLKLQQMSLSAPEAGTVVG-QVPGLGAFVQAGKP 208

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF-KAIIEKIDPIISQ 376
            + ++P  +   +RA+++      V+ G  ATV               A + +I P+ +Q
Sbjct: 209 AISLLPA-RPLQVRAELSAAYADAVQVGMKATVVPDSDGAENTSTLPPARVVRISPVFAQ 267

Query: 377 Q 377
            
Sbjct: 268 A 268



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 17/149 (11%), Positives = 41/149 (27%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +     + G I  E  ++ +  P  G I    V+ G+ + +G  LL+ +      
Sbjct: 38  AGATAVGKVAVARGIIDVEGGLIALAPPVDGSITAAPVKEGATVKKGQLLLSLDGALLQQ 97

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + +    +      +   ++ L  L      L                          +
Sbjct: 98  EVAMATADLALANDRLKGSQAQLRELERNATRLSTGASEGVSSNQQADAAKQQLAGVRAD 157

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             ++     L         + L ++ L  
Sbjct: 158 VDVAGAQVDLAQHKLEHARLKLQQMSLSA 186


>gi|109896946|ref|YP_660201.1| RND family efflux transporter MFP subunit [Pseudoalteromonas
           atlantica T6c]
 gi|109699227|gb|ABG39147.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           atlantica T6c]
          Length = 387

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 82/266 (30%), Gaps = 24/266 (9%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN----LFE 207
                 +   +  K +   + S+   R+  +  +  +     +       +++    L  
Sbjct: 34  AEQTDNAQARKEAKHRDAGLVSVRAERVHAKPITREINLYGRTEPNRRVTLRSEVNGLVV 93

Query: 208 KNAVSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           K  V++   + + E ++   T +L   +   K+ L    ++  E          +   +L
Sbjct: 94  KIYVTEGQSVKEGEPLIDIETSDLLNRLKSAKSTLAQ-RKIELEGAESLGQKGYQSKVNL 152

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            Q Q      +S+++ LE    + T+ +P  G +         +  +    +  +V    
Sbjct: 153 AQAQANLETAVSEVSTLELALSKSTLRAPFDGIVNERHV-ELGDLLKDGDEVAMLV-DLD 210

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              I A VT   +Q +  G  A+ R               I  I  +     N       
Sbjct: 211 PLIITADVTESDVQALTLGQKASGRMISND-----TVTGTIRYISSVSDMGTNTFNV--- 262

Query: 387 YEVILKITDLAFSDNNIELRNGFPAE 412
                   ++A  +   +   G   E
Sbjct: 263 --------EVAIDNPETKYLAGMSTE 280



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 41/114 (35%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V ++S  +G++ K  V  G  + +G PL+  E  +  + +   K ++   +  ++  +
Sbjct: 80  RRVTLRSEVNGLVVKIYVTEGQSVKEGEPLIDIETSDLLNRLKSAKSTLAQRKIELEGAE 139

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           S           L +A  + E  + +      +            +     ++L
Sbjct: 140 SLGQKGYQSKVNLAQAQANLETAVSEVSTLELALSKSTLRAPFDGIVNERHVEL 193


>gi|332362712|gb|EGJ40509.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK355]
          Length = 421

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 60/150 (40%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL           +  ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYVTEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNALKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADNEVTTAQIEAEKAQVTAQTES 208


>gi|325694208|gb|EGD36124.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK150]
          Length = 421

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL              ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYATEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNALKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADNEVTTAQIEAEKAQVTAQTES 208


>gi|300936446|ref|ZP_07151366.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 21-1]
 gi|300458368|gb|EFK21861.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 21-1]
          Length = 355

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/404 (12%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRMEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + N+ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETNDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|152994340|ref|YP_001339175.1| hypothetical protein Mmwyl1_0299 [Marinomonas sp. MWYL1]
 gi|150835264|gb|ABR69240.1| conserved hypothetical protein [Marinomonas sp. MWYL1]
          Length = 450

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 44/113 (38%), Gaps = 2/113 (1%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           PI+ SV +  EI+ +     +++P  GI+++  V     ++ G  +   +  E    ++ 
Sbjct: 200 PIQQSVIAPAEIVPQQPN-ILRAPIKGIVRELTVRPNDTVVAGQVVARLDAKELQQQLET 258

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            + +    R  +   +    F++ +        E R+ Q    +       ++
Sbjct: 259 ARQTYAISRAELRMAQQQ-SFIDEQRKAALAVLEGRQVQAQLDMTYLQQQLTR 310



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 52/362 (14%), Positives = 115/362 (31%), Gaps = 23/362 (6%)

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQL 138
           +   + T +  +       +     + R   +  + +  D + +     E+    RE++L
Sbjct: 96  KAQRIHTIDPTQLAFDDAARFADYFSARLIWLPIQNANGDLIASLLLSKEQELNLREKKL 155

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           L FL   +    + F       +++   +   +    L  L        + A      + 
Sbjct: 156 LSFLLNAYGHAWQSFIRQRRHFFKNKSWRWWAVGGSMLAGLLCIPIQQSVIAPAEIVPQQ 215

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVY-KSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             +++    K  V +  +   + +V  +    L     +Q+            A L  A 
Sbjct: 216 PNILRAPI-KGIVRELTVRPNDTVVAGQVVARLDAKELQQQLETARQTYAISRAELRMAQ 274

Query: 258 YLKEISRDLEQNQRTFADEMSK----LTILEKTREQKTILSPIAGTI-VYNQSFSSSNYA 312
               I    +           +    +T L++   +  I++P  G +   NQ        
Sbjct: 275 QQSFIDEQRKAALAVLEGRQVQAQLDMTYLQQQLTRTEIVAPYDGVVIFDNQGDWLGKPL 334

Query: 313 QQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               P+M I  P+     I  ++  + +  ++ G +  +              A + KI 
Sbjct: 335 ALGDPIMTIADPNKTELEI--RLPLQDVIELEIGSSLKLFL---NSDPANSVAAELVKIA 389

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII-HPI 430
              S  ++       Y + LK     F+D+   LR G         + TTL   +   P+
Sbjct: 390 YKASPTEDGQ-----YALQLK---GRFTDSVHSLRLGKKGVAKLYGEYTTLFYYLFRKPL 441

Query: 431 TD 432
           ++
Sbjct: 442 SE 443


>gi|88810710|ref|ZP_01125967.1| Secretion protein HlyD [Nitrococcus mobilis Nb-231]
 gi|88792340|gb|EAR23450.1| Secretion protein HlyD [Nitrococcus mobilis Nb-231]
          Length = 500

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 82/263 (31%), Gaps = 37/263 (14%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKN--AVSQNDLNQQERIVYKSTLELRENIHE 236
           + L+N+   L  L + H +   + + +       V +  +            +L+ +   
Sbjct: 180 ISLDNRRRQLIGLETDHVERRPLTRTIRAVGEVVVDETQVTDVTLKYDGWVGDLKADYVG 239

Query: 237 QKNMLRHI------------NELYDEANLEFANY-----LKEISRDLEQNQRTFADEMSK 279
                                + Y EA    A       L + +R         A ++  
Sbjct: 240 APVKRGQTLFGIYSPALFSAQQEYLEARQRLARRGSNDSLIQAARQRLMLWDIAAAQVRA 299

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L       +   I +P  GT+V        +  +  Q LM+I       +I A+V   ++
Sbjct: 300 LERRGSPIKYLPIHAPATGTVVEKNVV-EGSAVKSGQFLMRIA-DLSAVWIDAEVYDSEL 357

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             V  G TA V   +    R    +A ++ + P +  Q             ++++     
Sbjct: 358 PLVHAGMTAEVTLAYLPRARY---EAKVDYVYPYLQGQTRTG--------RIRLS---LP 403

Query: 400 DNNIELRNGFPAEVLFTA--KNT 420
           + +  L+    AEV   A     
Sbjct: 404 NPDGHLKPDMYAEVKLKADLGER 426


>gi|103487919|ref|YP_617480.1| secretion protein HlyD [Sphingopyxis alaskensis RB2256]
 gi|98977996|gb|ABF54147.1| Secretion protein HlyD [Sphingopyxis alaskensis RB2256]
          Length = 408

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 60/195 (30%), Gaps = 39/195 (20%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEM-------SKLTILEKTREQKTILSPIAGTIVYN 303
           A  E+ +  K    +L    R     M       +++    +T  + T+ +PI G +   
Sbjct: 167 AQTEYLSVKKLGKPELTAAARQRLRLMGMPEGVIAEVDRSGRTGGRLTVRAPIGGVVQTL 226

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            + +        Q L +I       ++ A +   Q   VK G  AT     +     + F
Sbjct: 227 NARA-GVTLASGQTLAEISGLG-TVWLNAALPEAQAGLVKIGQPATANLTAFP---GEAF 281

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF-------------- 409
              +  I P  +     L       V ++      ++    LR G               
Sbjct: 282 TGRVVAILPTAAADSRTLT------VRIE-----LANRGGRLRPGMFAVVALGGDAKPTL 330

Query: 410 --PAEVLFTAKNTTL 422
             P+E +      ++
Sbjct: 331 LVPSEAVIRTGTRSI 345


>gi|296161619|ref|ZP_06844423.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
 gi|295888096|gb|EFG67910.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
          Length = 361

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 66/205 (32%), Gaps = 35/205 (17%)

Query: 18  KRMTLLSIIGIIGLITWS------------ILLPIE----ISVSSSGEILNE---DNVVE 58
           K +  LSIIGI+  +  +               P+      ++ + G + +E      + 
Sbjct: 4   KLIFALSIIGIVAGLVGAYLFGIERKAEPPAFAPVSNPYVTAIYADGIVESEQRGGENIN 63

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    SG I +  V  G  +  GTPL+T +D        +++ +   LR   +   + L 
Sbjct: 64  IYPEVSGPITQVLVHEGDHVAAGTPLITIDD-------SVQRATTAQLRAQSEAALTVLQ 116

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L           E R+E L     +     S +         R     L +        
Sbjct: 117 ELKA---------EPRKETLAVTRAQVEQAQSNLKAARDQYEKRRASYDLDQRSISKDVV 167

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK 203
               +  +   A L   Q+   + +
Sbjct: 168 DTARDAVAQAEAGLDVAQRQYELTR 192


>gi|28422303|gb|AAH46881.1| Zgc:66156 protein [Danio rerio]
          Length = 1622

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 80/214 (37%), Gaps = 12/214 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ----LLDFLG 143
            +  E+ + ++ K  S++  +  +  E   L     + + L    + ++      L ++  
Sbjct: 1402 DAEESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQ 1461

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY    +++   G     RSL  ++ +M++ Y   LD   +   L+    + Q++++ + 
Sbjct: 1462 KYEEGQAEL--EGAQKEARSLSTEIFKMKNSYEEALD---QLETLKRENKNLQQEISDLT 1516

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                +   S ++L + ++ V     E++  + E +  L H         LE      EI 
Sbjct: 1517 EQLGETGKSIHELEKAKKTVESEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKSEID 1576

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQK---TILS 294
            R L +              +  + +      I S
Sbjct: 1577 RKLAEKDEEIEQIKRNSQRVMDSMQSTLDSEIRS 1610



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 84/225 (37%), Gaps = 24/225 (10%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREE--QLLDFL 142
              ++   +  +  +++ ++  ++ EKS     +D L++  + + KA  + E+  + L+  
Sbjct: 1199 QADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLSSNMEAVAKAKTNLEKICRTLEDQ 1258

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                 T +      ++ +        T          + E   S L     ++ + +  +
Sbjct: 1259 ASELKTKNDELVRQLNDISAQKARLQTENGEFGRQMEEKEALVSQLTRGKQAYTQQIEEL 1318

Query: 203  KNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            K   E+   ++N L               +Q     ++  EL+  + +  + +      Y
Sbjct: 1319 KRHIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKY 1378

Query: 249  D----EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +    +   E     K++++ L+  + +     SK   LEKT+++
Sbjct: 1379 ETDAIQRTEELEESKKKLAQRLQDAEESIEAVNSKCASLEKTKQR 1423



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 73/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K   I      I+ E+S    L  K   L+   
Sbjct: 1059 EGDLKLAQESIMDLENDKQQSEEKIKKKDFEISQFLSKIEDEQSLGAQLQKKIKELQARI 1118

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1119 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1172

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1173 -----EFQKLRRDLEESTLQHEATAAAPRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1227

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +       + +   +LE+  RT  D+ S+L        ++
Sbjct: 1228 KMEIDDLSSNMEAVAKAKTNLEKICRTLEDQASELKTKNDELVRQ 1272


>gi|300312016|ref|YP_003776108.1| multidrug resistance A (translocase) transmembrane secretion
           protein [Herbaspirillum seropedicae SmR1]
 gi|300074801|gb|ADJ64200.1| multidrug resistance A (translocase) transmembrane secretion
           protein [Herbaspirillum seropedicae SmR1]
          Length = 406

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 32/303 (10%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A ++ + Q++    +  +  +      +     +L   + + R ++LN   L    +   
Sbjct: 74  AVKADDTQVVKAGQQLVALDAADTRLALDQAQAALAQAVRQTRQLFLNNDTLAANVAAAD 133

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + L+  ++DL   +      AVSQ D++     V  +   L +            +    
Sbjct: 134 SNLARAREDLQRRQAGLSSGAVSQEDVSHARDAVKSAVAALDQARAAAAANRALTDHTSV 193

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
             +         +                          +  I++P++G +   +S    
Sbjct: 194 TEHPNVLQAATAVRN------------------AYLNYARVNIVAPVSGFVSK-RSVQVG 234

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                  PLM IVP  +  +I A     Q+QH++ G    V    Y      K+K  +  
Sbjct: 235 QRIAAGNPLMAIVPL-EQIWIDANFKESQLQHIRIGQPVEVIADVYGSSV--KYKGTVIG 291

Query: 370 ID----------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                       P  +   N ++  +   V + +       + + +     A V      
Sbjct: 292 FSAGTGGAFSLLPAQNATGNWIKVVQRVPVRIALDPEQVRAHPLRIGLSTTATVDIHGDG 351

Query: 420 TTL 422
             L
Sbjct: 352 RAL 354



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 29/98 (29%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I +   G +   + ++   +  G  L+  +  +T   +D  + ++        
Sbjct: 57  VGGNVVQISAQVGGTVVAVKADDTQVVKAGQQLVALDAADTRLALDQAQAALAQAVRQTR 116

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                 D L       +       E L        S  
Sbjct: 117 QLFLNNDTLAANVAAADSNLARAREDLQRRQAGLSSGA 154


>gi|227356695|ref|ZP_03841081.1| HlyD-family secretion protein [Proteus mirabilis ATCC 29906]
 gi|227163203|gb|EEI48134.1| HlyD-family secretion protein [Proteus mirabilis ATCC 29906]
          Length = 328

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 96/296 (32%), Gaps = 34/296 (11%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +  V E A  ++ + L       +            S   SL +     RS  + +   
Sbjct: 55  AELQVDEGAPVTKGQLLGQLDDAPYINALNKAYGERDSAIASLALMEAGYRSEEIAQA-- 112

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           ++  SL RA     +      ++L  +  +S NDL+                 + +    
Sbjct: 113 QSDVSLKRAAWQYAENFYKRQQDLANRKVISANDLD--------------SARNNRNQAA 158

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             +    D+ N     Y +E   D++  +       + +   E   +   + SP  GTI+
Sbjct: 159 AALKAAQDKLNQYQNGYRQE---DIDMARGQVLQAKAAVAQAELNLQDTKLTSPAEGTIL 215

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             ++           P+   V  +   ++RA ++   +          +   +    ++K
Sbjct: 216 T-RAVEPGTILSAGSPVFT-VSLTNPVWVRAYISENHLGEAIPNREVYL---YTDSRKDK 270

Query: 362 KFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
            +   I  + P       S +   L+T   Y + + +TD      +  LR G P  
Sbjct: 271 PYHGTIGFVSPTAEFTPKSVETPELRTDLVYRIRVVVTDA-----DDSLRQGMPVT 321



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 89/292 (30%), Gaps = 23/292 (7%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + + QV+ G+ + +G  L   +D    + ++       +    +   ++      ++ 
Sbjct: 52  GKLAELQVDEGAPVTKGQLLGQLDDAPYINALNKAYGERDSAIASLALMEAGY---RSEE 108

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               ++  S +     +   ++     + N  + S    L                 ++K
Sbjct: 109 IAQAQSDVSLKRAAWQYAENFYKRQQDLANRKVIS-ANDLDSARNNRNQAAAALKAAQDK 167

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +        D+   + L  K AV+Q +LN Q+  +          I  +      I
Sbjct: 168 LNQYQNGYRQEDIDMARGQVLQAKAAVAQAELNLQDTKLTSPA---EGTILTRAVEPGTI 224

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                            +   + +N    A    ++ +   +R+ K    P  GTI +  
Sbjct: 225 LSAGSPVFTVSLTNPVWVRAYISENHLGEAIPNREVYLYTDSRKDK----PYHGTIGFVS 280

Query: 305 ---SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRF 352
               F+  +                    R +V        +++G   T++F
Sbjct: 281 PTAEFTPKSVETP--------ELRTDLVYRIRVVVTDADDSLRQGMPVTLKF 324


>gi|225686227|ref|YP_002734199.1| plectin-1 [Brucella melitensis ATCC 23457]
 gi|256262643|ref|ZP_05465175.1| polysaccharide export protein [Brucella melitensis bv. 2 str. 63/9]
 gi|225642332|gb|ACO02245.1| Plectin-1 [Brucella melitensis ATCC 23457]
 gi|263092427|gb|EEZ16680.1| polysaccharide export protein [Brucella melitensis bv. 2 str. 63/9]
 gi|326553865|gb|ADZ88504.1| plectin-1 [Brucella melitensis M5-90]
          Length = 415

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 76/221 (34%), Gaps = 14/221 (6%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+     +    + ++  +    R   + E    DF     +       +  + 
Sbjct: 151 VTAGMQLI--SAQQEYADLQMQITAQTIRRARFEAELKGTDFTYAVPEQ-----TAANKD 203

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++            +F+   +++    +    +  S       L+    L    +   Q+
Sbjct: 204 MVALTRHMVEGERTLFDMRRNNLAAERRALEAQAASYGDEITTLQQSIKLHDTEIQLLQE 263

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDE 250
           ++   K+L ++   +++ L   ER +  +  +       L      Q  + + I  L + 
Sbjct: 264 NVNSSKSLVDRGLAAKSSLRDMERDLSSTRRDALELASFLARARQNQLAVEQRIANLDET 323

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              E A+ L+EI  ++ + QR    ++     + K+  Q +
Sbjct: 324 RRSEAASSLQEIDLNMARMQRRSNSQLEARAEIAKSSGQIS 364


>gi|171321238|ref|ZP_02910205.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MEX-5]
 gi|171093474|gb|EDT38650.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MEX-5]
          Length = 304

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/266 (9%), Positives = 80/266 (30%), Gaps = 4/266 (1%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             +  ++ I G++ W      E +  +      + N V +    SG + +  V++ + + 
Sbjct: 5   GAVAVVLVIAGIVWWLATRNQESTDDAY----TDGNAVAVAPHVSGYVTRLAVDDNTYVH 60

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L+  +  +    +D  +V +   +  +D  +  LD  + ++    +   ++ E   
Sbjct: 61  RGDVLVEIDPRDYRAQVDAARVQLGLAQAQLDASRVQLDIAHVQFPAQYRQARAQIESAE 120

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               +  +   +       +  +         R+     + +    +   +L+    +  
Sbjct: 121 AAYRQALAAQERQRAVDARATSQQAIDAADAQRASADANVAMAQAQARTASLVPQQIRQA 180

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                      V+  D++    +               K     +    D      + +L
Sbjct: 181 ETALAYRRAVLVALRDVDNALAVYRTDQARAAALDDAVKAEQGALELARDRYRKGLSPFL 240

Query: 260 KEISRDLEQNQRTFADEMSKLTILEK 285
             +  + + +Q         L     
Sbjct: 241 DVLDAERQWSQGRQQAVEGALQTTTD 266


>gi|260683984|ref|YP_003215269.1| putative lipoprotein [Clostridium difficile CD196]
 gi|260687644|ref|YP_003218778.1| putative lipoprotein [Clostridium difficile R20291]
 gi|260210147|emb|CBA64312.1| putative lipoprotein [Clostridium difficile CD196]
 gi|260213661|emb|CBE05507.1| putative lipoprotein [Clostridium difficile R20291]
          Length = 415

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 110/350 (31%), Gaps = 94/350 (26%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V+ G  + +G  LL+    E        + S+K  +  +D  K++        
Sbjct: 75  GTVQEVYVKLGQNVRKGDELLSISSPE-------LENSVKQSKASLDLAKASYSSATGG- 126

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                 SL+ ++ + ++   N       
Sbjct: 127 --------------------------------------SLEAQVNQAKTALDN------- 141

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +      Q++    K L+E+  +S +   + E            ++ + K  L   
Sbjct: 142 ---AKIQYEESQRNYDNNKILYEQEVISLDQFKKIEF-----------SLEQTKQQLDSA 187

Query: 245 NELYDEANLE-FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              YD A  +          + L+Q Q +         +     ++ T+ SP+ GTI   
Sbjct: 188 QRAYDTATSKSIPQAKALAKKQLDQAQVS-------YNLAMSNLDKLTLTSPVDGTITA- 239

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++F S     QSQP   I+ +  +  +   V    I   KK     V           K 
Sbjct: 240 KNFDSKEMITQSQP-AFIISNPNILEVDLNVAESDIGKFKKDGNVDVIIE--DQRILGKI 296

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             +   +DP  S           Y V + +     ++ N + + G  A+V
Sbjct: 297 DYVPSVVDPQTSL----------YPVKVLV-----NNANNKFKAGMSAQV 331


>gi|325917467|ref|ZP_08179676.1| RND family efflux transporter, MFP subunit [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325536341|gb|EGD08128.1| RND family efflux transporter, MFP subunit [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 376

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 63/177 (35%), Gaps = 17/177 (9%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + + +  LR +   Y  A       L     D++Q +    D  ++  +        T+
Sbjct: 113 AVAQSEAQLRKLENSYRRATQLVGQQLVSA-ADVDQLKFDVEDSRAQHRLASLELSYTTV 171

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +PI+G I      +  N+ Q + P+ +IV           V  +++  +K G   T+  
Sbjct: 172 QAPISGVIASRSIKT-GNFVQINTPIFRIV-DDSQLEATLNVPERELATLKSGQPVTLLA 229

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                   ++F   +++I P++            + V+      AF      L+ G 
Sbjct: 230 DALP---GQQFVGKVDRIAPVVDSGSGT------FRVV-----CAFGKGAESLQPGM 272



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 58/161 (36%), Gaps = 4/161 (2%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  +        + +  SG+     VE G ++  G  L+  +       +   +  ++
Sbjct: 64  TGTAALEPRAEAQVV-AKTSGVALAVMVEEGQKVSAGQALVRLDPDRAHLAVAQSEAQLR 122

Query: 105 NLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            L   +    +     L +  DV +  F+  + +    L     + + V    IS V  S
Sbjct: 123 KLENSYRRATQLVGQQLVSAADVDQLKFDVEDSRAQHRLASLELSYTTV-QAPISGVIAS 181

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +K      I      + +  S L A L+  +++L  +K+
Sbjct: 182 RSIKTGNFVQINTPIFRIVDD-SQLEATLNVPERELATLKS 221


>gi|319788216|ref|YP_004147691.1| efflux transporter RND family, MFP subunit [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317466728|gb|ADV28460.1| efflux transporter, RND family, MFP subunit [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 412

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 76/222 (34%), Gaps = 23/222 (10%)

Query: 10  KRNHPASLKRMTLLSIIGIIGL---ITW-------------SILLPIEISVSSSGEILNE 53
           ++  P  L+ +  L+I G++ L   I W             +   P+    S++  +   
Sbjct: 19  EKKTPGPLQVVIPLAIAGVVLLSIAIAWWLLRGNGGPEVRTAQAAPLSSGPSAASVLDAS 78

Query: 54  DNVV-----EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
             VV      + +  +G +++  +E G ++ +G  L   + ++      L    +   R 
Sbjct: 79  GYVVARRMATVSAKVTGRVQEVLIEEGMRVEEGQVLARLDPVDADASRALATSQLAAARS 138

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            ID  ++ L         L+K   +  + +                  +++V R  ++  
Sbjct: 139 QIDNVQAQLLEAEANATRLQKLVGN--QLVSRAQYDQAVAQRDSLRAQLATVRRQAQVAQ 196

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            ++R       +   ++     +++   +   ++  L     
Sbjct: 197 DQLRIAGHGVDNTVVRAPFSGVVIAKAAQPGEIVSPLATGGF 238



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 62/216 (28%), Gaps = 25/216 (11%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFANYLKE-ISR 264
              A++ + L      +     +L E       + + + N+L   A  + A   ++ +  
Sbjct: 124 ASRALATSQLAAARSQIDNVQAQLLEAEANATRLQKLVGNQLVSRAQYDQAVAQRDSLRA 183

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP------- 317
            L   +R       +L I     +   + +P +G ++  ++                   
Sbjct: 184 QLATVRRQAQVAQDQLRIAGHGVDNTVVRAPFSGVVIA-KAAQPGEIVSPLATGGFTRTG 242

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +  IV       +   V    I  V+           Y D +         ++   I   
Sbjct: 243 IGTIV-DMDSLEVEVDVGEAYIGRVRAKMPVEATLNAYPDWKIPA------EVIATIPTA 295

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           D    T     V ++I   A  + +  +       V
Sbjct: 296 DRGKAT-----VKVRI---ALKEKDPRIVPDMGVTV 323


>gi|296225177|ref|XP_002758379.1| PREDICTED: laminin subunit beta-2 [Callithrix jacchus]
          Length = 1798

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 77/259 (29%), Gaps = 32/259 (12%)

Query: 51   LNEDNVVEIKSPFSGI---------IKKFQVEN-GSQILQGTPLLTFEDIETTDLIDLKK 100
            +       I+     I         +        G        L               +
Sbjct: 1545 IPASAEQ-IQHLAGAIAERVRSLADVDVILARTVGDVRRAEQLL---------QDARRAR 1594

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGIS 158
               +N +   +T ++AL+       V + A         D     H    ++      +S
Sbjct: 1595 SRAENEKQKAETVQAALEEAQRAQGVAQGAIWGAVADTQDTEQTLHQVQERMAGAEQALS 1654

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            S     +     + ++ L R      +S       S Q      + L       +  L  
Sbjct: 1655 SAGERAQQLDALLEALKLKRAGNSLAASTAEETAGSAQGRAQEAEKLL------RGPLGD 1708

Query: 219  QERIVYK-STLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFAD 275
            Q + V   +  + +  +  Q    +  +E  D  +A  +    L+E+    E+N+R   D
Sbjct: 1709 QYQTVKALAERKAQGVLAAQARAEQLRDEAQDLLQAAQDKLQRLQELEGTYEENERALED 1768

Query: 276  EMSKLTILEKTREQKTILS 294
            + ++L  LE  R +  + +
Sbjct: 1769 KAAQLDGLE-ARMRSVLQA 1786


>gi|159029983|emb|CAO90362.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 451

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 85/250 (34%), Gaps = 24/250 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++++  E R   L+  L   +    K       S   +   +L +  S   +    + K 
Sbjct: 114 LVQEGQEVRRGTLIATLDTRNLEAQKQELIAQRSQATAKLQEL-QAGSRKESIAAAQAKV 172

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             LR  L+  Q        L+++ A+++  L + +  V                      
Sbjct: 173 RDLREQLALAQSKYQRRLGLYQEGAITREQLEEVQTDVNAQ------------------Q 214

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADE-MSKLTILEKTREQKTILSPIAGTIVYNQ 304
              DEA  +          +L   Q+   D+  ++L  ++   E+  + +P  GTI    
Sbjct: 215 ARIDEAQSQLDELKAGTRPELISLQKAVIDQFDAQLKNIKLEIEKSQLQAPYDGTIALLH 274

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                     S P++++V  S     R  V   Q +++  G    ++      I   +  
Sbjct: 275 VN-IGTVVSASNPIVRLV-ESNKLEARIGVPIDQSENLPIGSKHRLKIG--NKILTGQVT 330

Query: 365 AIIEKIDPII 374
           + + +IDP  
Sbjct: 331 STLPQIDPTT 340


>gi|332665780|ref|YP_004448568.1| RND family efflux transporter MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332334594|gb|AEE51695.1| efflux transporter, RND family, MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 414

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 95/283 (33%), Gaps = 45/283 (15%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSIL---------------------LPIEIS 43
           M + +++    + + +  +     +G   W +L                        + +
Sbjct: 1   MDRKIEKKFWTTQRIVLFVLGAAFVGFFGWQLLKDHKTTLNVEQDKLTISEVTNGTFDET 60

Query: 44  VSSSGEILNEDNVVEIK--SPFSGIIKKFQVENGSQILQGTPLLTFED-----------I 90
           +  +G +     +  I+  +   G + +  VE G+++ +G  LL  E+            
Sbjct: 61  IPITGNVQP---LKTIRLDAVVGGYVTQKLVEGGNEVTKGQTLLKLENQQLKLNFLQSET 117

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E + L++  + + + L+      + +L+ L+   +  +  ++  ++   D +        
Sbjct: 118 EASRLVNDLQNTRQRLKVERFALRRSLNELDFNIEQAKDLYDRNKQLFADKVVSEQEYLR 177

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
              +Y   +  R +      + S      +   +   L   L   Q+++ + +   E   
Sbjct: 178 AKRDYERLTKQREI-----EIESQKYQEENAVIQIKQLEGTLERTQRNVQLWRQTLENLE 232

Query: 211 V--SQNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDE 250
           V      L     +   S +   +NI +  ++    I    DE
Sbjct: 233 VKAPVPGLLSSMDVEVGSNISQGQNIGQIDDLRGFKIRAAIDE 275



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 62/211 (29%), Gaps = 28/211 (13%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            L   +      F    +   R +       + + + R  L    + L   +   +    
Sbjct: 100 LLKLENQQLKLNFLQSETEASRLVNDLQNTRQRLKVERFALRRSLNELDFNIEQAKDLYD 159

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             K LF    VS+ +  + +R   + T                      E  +E   Y +
Sbjct: 160 RNKQLFADKVVSEQEYLRAKRDYERLT-------------------KQREIEIESQKYQE 200

Query: 261 E-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           E     ++Q + T       + +  +T E   + +P+ G +         +   Q Q + 
Sbjct: 201 ENAVIQIKQLEGTLERTQRNVQLWRQTLENLEVKAPVPGLLSSMDV-EVGSNISQGQNIG 259

Query: 320 KIVPHSKLTY---IRAKVTPKQIQHVKKGYT 347
           +I           IRA +    I  V  G  
Sbjct: 260 QI----DDLRGFKIRAAIDEYYINRVFSGLP 286


>gi|313110301|ref|ZP_07796193.1| putative membrane fusion protein [Pseudomonas aeruginosa 39016]
 gi|310882695|gb|EFQ41289.1| putative membrane fusion protein [Pseudomonas aeruginosa 39016]
          Length = 382

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 83/305 (27%), Gaps = 19/305 (6%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            + L     +  V E  F    E +     +            +     +     + +  
Sbjct: 78  AAKLPGRVAEIKVDEGDFVKAGEIVARMDTQVLEAQLAQAQAQVRQAENAKLTATSLVAQ 137

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               +   +   +  +A L++ QK  T  + L ++NA+ Q  L+     +  +   L   
Sbjct: 138 RESEKSTAQAVVAQRQAELTAAQKRFTRTEALVKRNALPQQQLDDDRATLQSAQAALSAA 197

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +  +    I     +                 + Q       + +  L+   +   + 
Sbjct: 198 RSQVISAQAAIEAGRSQVI---------------EAQSAIEAAKASVARLQADIDDSLLK 242

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G + Y +             L+ +V      Y+   +   Q   V  G    +   
Sbjct: 243 APRNGRVQY-RVAQPGEVLPAGGKLLNMV-DLADVYMTFFLPSMQAGRVGLGQEVRLVID 300

Query: 354 HYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              D       + +  +     +  +  N + +  + V  ++           ++ G P 
Sbjct: 301 AVPDYVIPAKVSYVASVAQFTPKTVETANEREKLMFRVKARLDPALLEKYITYVKTGVPG 360

Query: 412 EVLFT 416
                
Sbjct: 361 MAYLR 365



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 85/234 (36%), Gaps = 10/234 (4%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEI 59
           +   + +K+     L R  +++ +  +G++ W +  P    E   S +G I   +  V++
Sbjct: 20  NVRGEGMKQESKRWLSRALVVAALLGVGVLVWQVSRPTGLGEGFASGNGRIEATE--VDV 77

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
            +   G + + +V+ G  +  G  +   +       +   +  ++       T  S +  
Sbjct: 78  AAKLPGRVAEIKVDEGDFVKAGEIVARMDTQVLEAQLAQAQAQVRQAENAKLTATSLVAQ 137

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
             ++    +     R+ +L     ++  T + V    +    + L      ++S      
Sbjct: 138 RESEKSTAQAVVAQRQAELTAAQKRFTRTEALVKRNALPQ--QQLDDDRATLQSAQAALS 195

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
              ++    +A + + +  +   ++  E    ++  + + +  +  S L+   N
Sbjct: 196 AARSQVISAQAAIEAGRSQVIEAQSAIE---AAKASVARLQADIDDSLLKAPRN 246


>gi|256807367|gb|ACV30049.1| putative efflux RND transporter protein [uncultured bacterium
           B7P37metaSE]
          Length = 400

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 60/220 (27%), Gaps = 34/220 (15%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              L        +     +++      L AL    + +    + L    A SQ DL   E
Sbjct: 106 ESQLAGARADAAASEQAVVEVRASLESLTALAEKAKIEYDRKRALVPSGAASQADLTTTE 165

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
               ++  E        + +                                 A   + +
Sbjct: 166 TAFKQANAERARAAATIERLAAQ-----------------------------NASAEANV 196

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +LE       + SP+ G +V  +  S  +       LM+IV       + A+     + 
Sbjct: 197 RLLEVRLGYAMMRSPLNGIVVS-KDRSVGDLLTPGIKLMEIV-DPNTLILTARFDESVLD 254

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
            ++ G      F        +  K  + ++   + ++   
Sbjct: 255 VIRPGQRVAAHFTS---DATRPLKGTVFRLRRQVDEETRE 291



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 52/192 (27%), Gaps = 16/192 (8%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNED--------------NVVEIK 60
           A  + + ++    I+  I  +    +   V +   +                  + V + 
Sbjct: 14  AFRRALPIIGAAAIVMAIGAAGYFYLVPHVVAGTTVEATSATLEIRGPALLDAIDKVVVT 73

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +   G +K  +V+    + +G  L T +  +    +   +         +   +++L+ L
Sbjct: 74  ARIQGFLKTIEVDKNDLVTKGQLLATIDAEDFESQLAGARADAAASEQAVVEVRASLESL 133

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               +  +  ++ +   +           +                    +  +      
Sbjct: 134 TALAEKAKIEYDRKRALVPSGAASQADLTTT--ETAFKQANAERARAAATIERLAAQNAS 191

Query: 181 LENKSSLLRALL 192
            E    LL   L
Sbjct: 192 AEANVRLLEVRL 203


>gi|254883795|ref|ZP_05256505.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319643523|ref|ZP_07998146.1| hypothetical protein HMPREF9011_03747 [Bacteroides sp. 3_1_40A]
 gi|254836588|gb|EET16897.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317384928|gb|EFV65884.1| hypothetical protein HMPREF9011_03747 [Bacteroides sp. 3_1_40A]
          Length = 407

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 64/210 (30%), Gaps = 18/210 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            Q E    K+T +  E  ++ +  L   N    E  L      +E   + ++ Q      
Sbjct: 96  LQSELQSAKATYDGNEAEYDYQKKLYDRNRKLHEKQLISDMDYEETVYNFQRAQSALEQS 155

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAK 333
            + L   E+     TI SPI G +   +                L  I        + A 
Sbjct: 156 KAALAKAERNLSYATITSPIDGVVTS-RDVEEGQTVASGFETPTLFTIAADLTKMQVVAD 214

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------DPIISQQDNNLQTQEYY 387
           V    I  V++G   T     Y D     F+ ++ ++          S       T   Y
Sbjct: 215 VDEADIAGVEEGARVTFTVDAYPDD---VFEGVVRQVRLGSTNSTSSSSSTTTSTTVVTY 271

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           EV++   +       ++L+    A      
Sbjct: 272 EVVITADNPY-----LKLKPRLTANATIYT 296



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 50/142 (35%), Gaps = 1/142 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++++G I     V E+ +  SGII K  V+  S + +G  +   + +     +   K + 
Sbjct: 49  ITATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSVVKKGELIAEMDKVTLQSELQSAKATY 107

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                  D +K   D     ++    +    EE + +F     +          +    S
Sbjct: 108 DGNEAEYDYQKKLYDRNRKLHEKQLISDMDYEETVYNFQRAQSALEQSKAALAKAERNLS 167

Query: 164 LKMKLTRMRSIYLNRLDLENKS 185
                + +  +  +R   E ++
Sbjct: 168 YATITSPIDGVVTSRDVEEGQT 189


>gi|209551046|ref|YP_002282963.1| efflux transporter RND family, MFP subunit [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209536802|gb|ACI56737.1| efflux transporter, RND family, MFP subunit [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 379

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/210 (10%), Positives = 62/210 (29%), Gaps = 23/210 (10%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            ++ L   E   E  ++     E   + ++   + L++ +   +Q        +S L   
Sbjct: 112 AEANLAAAERSVETADLANKRAEQLFDKSVAPKSQLEQAALSHDQAISQRDAALSALDQA 171

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +       + +   G +    + +          ++  V       ++  +    I   K
Sbjct: 172 KNQVSYTELKAGQNGIVTSINADT-GQVVGSGTAVVT-VAVDGEKEVQIAIPENDIAEFK 229

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G T       +   ++      + ++     QQ         + V + +       N+ 
Sbjct: 230 PGKTVK---TSFWADKKLLLDGKVREVSGSADQQSRT------FAVRVSL------PNDP 274

Query: 404 ELRNGFPA--EVLFTAKNTTLAQEIIHPIT 431
            +  G  A  E   +  N      +  P++
Sbjct: 275 RVLLGMTATIEADVSTGN----SYVSIPLS 300



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 3/110 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFLN 121
           G I +  V+ G ++  G  L   +  +    +   + ++      ++T        + L 
Sbjct: 78  GKITERMVDIGDRVTPGDVLARVDATDYQLAVKTAEANLAAAERSVETADLANKRAEQLF 137

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           +K    +   E         + +  +  S +        Y  LK     +
Sbjct: 138 DKSVAPKSQLEQAALSHDQAISQRDAALSALDQAKNQVSYTELKAGQNGI 187


>gi|149910493|ref|ZP_01899133.1| efflux transporter, RND family, MFP subunit [Moritella sp. PE36]
 gi|149806453|gb|EDM66425.1| efflux transporter, RND family, MFP subunit [Moritella sp. PE36]
          Length = 367

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 95/265 (35%), Gaps = 30/265 (11%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-A 210
           +    I  V   L       RSI L      ++ + L A ++    ++     L ++   
Sbjct: 51  IVEKPIPQVRTELFEAQLVARSISLYGRTAADRETNLGAEIAGRVAEV-----LAKRGSF 105

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V + D+      V     +L + +   K + +   E+  E   + A    +    L +  
Sbjct: 106 VHKGDII-----VRMEKNDLPQLLLRAKTLYKQ-REIEYEGAKKLAAQGFQGKARLAEAA 159

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               D  + +  ++   E+  I++PI+G I+  +     +Y  +  P+  I        I
Sbjct: 160 TALTDASTNVFTIKLQLEKTVIIAPISG-ILNERHVEVGDYLAKGNPIATIA-DINPLII 217

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           +A VT + I  VK    A VR         ++ +  +  I  + +   N       + + 
Sbjct: 218 KADVTEQDINKVKLQQVAKVRLVS-----GEEIEGKVRYISRVANAATNT------FRIE 266

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF 415
           + I      + ++ L  G  AE+  
Sbjct: 267 VAID-----NADLSLSAGGSAELSI 286


>gi|332366303|gb|EGJ44055.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK1059]
          Length = 421

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL              ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYATEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNSLKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADNEVTTAQIEAEKAQVTAQTES 208


>gi|332361528|gb|EGJ39332.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK1056]
          Length = 415

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL              ++++ ++ 
Sbjct: 61  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYATEQQLTAQSA 112

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 113 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNALKDKYNSSQDESLLEQIKSAEDELAQ 172

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 173 ALSDAKTADSEVTTAQIEAEKAQVTAQTES 202


>gi|302381959|ref|YP_003817782.1| secretion protein HlyD [Brevundimonas subvibrioides ATCC 15264]
 gi|302192587|gb|ADL00159.1| secretion protein HlyD family protein [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 370

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 76/282 (26%), Gaps = 29/282 (10%)

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           + +    +     + +    L        S   +    E   +  +A ++  Q D    +
Sbjct: 106 RIYLQRLEQARAALHAAEAQLANSAQTQTSARGSVAQTEASIAGAQASVTKAQADFNRAR 165

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            LF+   V+Q  +      V ++ L   E         + I E      +     L    
Sbjct: 166 TLFQGGWVAQAQV-----DVARTALRASEAQLAAARAQQGIAETGVTTAVIGRGAL---- 216

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
                 +       + + + E       I +P  G +                 L  +VP
Sbjct: 217 ------EAQVESARAAVHLAEIDLANTRITAPRDGRLGEISVR-QGQQVAVGTQLAALVP 269

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DN 379
                ++ A     Q+  ++ G  AT+                +E+I P    +      
Sbjct: 270 --DRIWVTANFKENQLTDIRPGQPATLSVDALGGRT---LTGRVERIAPATGSEFSVIRP 324

Query: 380 NLQTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFTA 417
           +  T  + +V  ++      D +      L  G         
Sbjct: 325 DNATGNFTKVAQRVPVRIALDPDQSGLDRLAPGMSVVAHVDT 366



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/302 (10%), Positives = 88/302 (29%), Gaps = 19/302 (6%)

Query: 20  MTLLSIIGIIGLITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           +  L+ + +  LI W+  L P    V ++        V  +    +G +    V++   +
Sbjct: 35  LLGLAALIVGVLILWAWKLPPFTSGVQNTDNAYVRGQVTVVAPQVTGYVTAVNVQDFQDV 94

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            QG  + T +D      ++  + ++      +                 E +    +  +
Sbjct: 95  KQGDLIATIDDRIYLQRLEQARAALHAAEAQLANSAQTQTSARGSVAQTEASIAGAQASV 154

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                 ++   ++    G       + +  T +R+          +  +    +++    
Sbjct: 155 TKAQADFN--RARTLFQGGWVAQAQVDVARTALRASEAQLAAARAQQGIAETGVTTAVIG 212

Query: 199 LTMMKNLFEKN----AVSQNDLNQQERIVYK--STLELRENIHEQKNMLRHINELYDEAN 252
              ++   E       +++ DL        +     E+     +Q  +   +  L  +  
Sbjct: 213 RGALEAQVESARAAVHLAEIDLANTRITAPRDGRLGEISVRQGQQVAVGTQLAALVPDRI 272

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              AN+ +    D+   Q       +          +   ++P  G        S  +  
Sbjct: 273 WVTANFKENQLTDIRPGQPATLSVDA--LGGRTLTGRVERIAPATG--------SEFSVI 322

Query: 313 QQ 314
           + 
Sbjct: 323 RP 324


>gi|84501729|ref|ZP_00999901.1| GAF domain protein [Oceanicola batsensis HTCC2597]
 gi|84390350|gb|EAQ02909.1| GAF domain protein [Oceanicola batsensis HTCC2597]
          Length = 624

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 65/203 (32%), Gaps = 20/203 (9%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI------SRDLEQNQRTFADEM 277
              T+   + + E  +    + EL   + L+     +           +   +   A   
Sbjct: 411 AGDTVAAGDVLAELDDTDLRLEELRWRSELDRLEAQQRDALAQYDRPQVAFLEAQIAQGR 470

Query: 278 SKLTILEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
           ++L +  +   + TI SPI G +V  + S       Q  + L ++ P      I   V  
Sbjct: 471 AQLDLALQQLSRTTITSPIDGLVVTGDLSQKLGTPVQPGELLYEVAPLD-AFRIDIYVDE 529

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           + ++HV    +  +     +   ++     I +I P+   +D        + V     + 
Sbjct: 530 RDLRHVTGDQSGRI---ALSGRPDEGLPFEITRITPVAEARDGANT----FRV-----EA 577

Query: 397 AFSDNNIELRNGFPAEVLFTAKN 419
              D    LR G        A  
Sbjct: 578 ELKDLPDWLRPGMEGVARIDAGE 600



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 33/104 (31%), Gaps = 9/104 (8%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +PF+G I+      G  +  G  L   +D +         + ++ LR   + ++      
Sbjct: 398 APFNGFIETAPARAGDTVAAGDVLAELDDTD---------LRLEELRWRSELDRLEAQQR 448

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           +             E Q+     +      ++    I+S    L
Sbjct: 449 DALAQYDRPQVAFLEAQIAQGRAQLDLALQQLSRTTITSPIDGL 492


>gi|312883999|ref|ZP_07743716.1| hypothetical protein VIBC2010_01913 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368457|gb|EFP95992.1| hypothetical protein VIBC2010_01913 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 340

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 75/249 (30%), Gaps = 30/249 (12%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ-ERIVYKSTLEL 230
           + I L       K + L A ++     L           V + D  +  E IV     +L
Sbjct: 47  KEIELYGRSEAQKKATLSAEIAGKINQL----------YVKKGDWVELGELIVSIDKGDL 96

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +  ++  K +L  + E    A                  Q    +   +++  E   +  
Sbjct: 97  KSQLNTAKALL-KVKEKEYRAARALQKKGLSGEIAFANAQAQLIEANFQVSKAELALKNT 155

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P +G +         ++  +  P+  +V       I A V  K I  ++ G  A V
Sbjct: 156 EVKAPFSGFVNDFSV-EIGDFVARGDPIASLV-DLSKLVIMADVNEKNIHEIELGQVALV 213

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           R      +   + +  +  I    +   N               ++   + N  +  G  
Sbjct: 214 RL-----LDGSEKQGTLIYIARTSNPSTNTF-----------PIEIELPNPNHLVSAGVS 257

Query: 411 AEVLFTAKN 419
           AE+      
Sbjct: 258 AEINLRLGR 266



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 52/154 (33%), Gaps = 5/154 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V+ G  +  G  +++ +  +    ++  K  +K         ++    L  K 
Sbjct: 69  GKINQLYVKKGDWVELGELIVSIDKGDLKSQLNTAKALLKVKEKEYRAARA----LQKKG 124

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E AF + + QL++   +       + N  + + +       +     ++ R D    
Sbjct: 125 LSGEIAFANAQAQLIEANFQVSKAELALKNTEVKAPFSGFVNDFSVEIGDFVARGDPIAS 184

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
              L  L+     +   +  + E   V+   L  
Sbjct: 185 LVDLSKLVIMADVNEKNIHEI-ELGQVALVRLLD 217


>gi|226226553|ref|YP_002760659.1| secretion protein HlyD family protein [Gemmatimonas aurantiaca
           T-27]
 gi|226089744|dbj|BAH38189.1| secretion protein HlyD family protein [Gemmatimonas aurantiaca
           T-27]
          Length = 425

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 63/202 (31%), Gaps = 16/202 (7%)

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR-TFADEMSKLTILEKT 286
           ++   N      + +    L     +E      E+++ L +    +    ++ +    + 
Sbjct: 118 IQAERNYERSLKIQQSTPTLVSVEQIEQLKTQMEVNKALAEAADYSVEQAVASVRDARQA 177

Query: 287 REQKTILSPIAGTIVYNQSFS-----SSNYAQQSQPLMKIVPHSKLTYIRAKVTP--KQI 339
             + TI++P++G I                 + +  L+ I   S +  +  KV      +
Sbjct: 178 LNRTTIVAPMSGKITRLNVEEGETAIMGTLNKDAATLLTI---SDMAVLETKVKVDETDV 234

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +  G +A ++   + D         I       +   N       YEV ++       
Sbjct: 235 ARINVGDSALIQIDAFPDTTFVGKVVEISNSSVTKTATANTGDQAIDYEVRVQ-----LL 289

Query: 400 DNNIELRNGFPAEVLFTAKNTT 421
           +  ++ R  F A         T
Sbjct: 290 NPPVDTRPDFSATAKIVTATRT 311



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 64/169 (37%), Gaps = 3/169 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V++SG+I     +V + +  +G I +  V+ G  + +G  LL  +  + T  +   +   
Sbjct: 45  VTASGQIQPRT-MVNVSADVTGKIVRLSVKEGDIVKKGQFLLQIDPEQPTAALQRSEAGQ 103

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + +      ++ L      Y+   K  +S    +     +   T  +V      +   S
Sbjct: 104 ASAKAQAAQARANLIQAERNYERSLKIQQSTPTLVSVEQIEQLKTQMEVNKALAEAADYS 163

Query: 164 LKMKLTRMRS--IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++  +  +R     LNR  +    S     L+  + +  +M  L +  A
Sbjct: 164 VEQAVASVRDARQALNRTTIVAPMSGKITRLNVEEGETAIMGTLNKDAA 212


>gi|256221765|ref|NP_001157779.1| plectin isoform 1g [Rattus norvegicus]
          Length = 4551

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1347 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1406

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1407 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1459

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1460 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1518

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1519 AELALRVKAEAEAAREKQR 1537



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2187 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2240

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2241 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2300

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2301 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2357

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2358 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2406



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2324 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2383

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2384 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2441

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2442 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2501

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2502 EKDSLLQRERFIEQ 2515



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1644 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1703

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1704 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1753

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1754 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1812

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1813 LAEEAKRQRQLAEED 1827



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2236 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2295

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2296 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2355

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2356 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2415

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2416 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2446



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1345 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1404

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1405 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1464

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1465 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1524

Query: 291  T 291
             
Sbjct: 1525 V 1525



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1555 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1614

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1615 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1674

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1675 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1734

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1735 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1778



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1840 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1899

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1900 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1959

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1960 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2019

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2020 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2057



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1460 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1513

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1514 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1571

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1572 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1629

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1630 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1661


>gi|223939171|ref|ZP_03631053.1| efflux transporter, RND family, MFP subunit [bacterium Ellin514]
 gi|223892124|gb|EEF58603.1| efflux transporter, RND family, MFP subunit [bacterium Ellin514]
          Length = 402

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 68/205 (33%), Gaps = 20/205 (9%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            Q +R    + +E  +   E+ +     N+   EA L       +   D +  Q      
Sbjct: 104 LQTDRASRLTDIEGAKLTVEKTHRNYERNQRLSEAKLISQEVFDDGKTDYDLAQNALERS 163

Query: 277 MSKLTILEKTREQKTILSPIAGTIV------YNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              L +++    +  I++P   T++            S  +      +M I  + K   +
Sbjct: 164 QKALRVVDDQLSKTRIVAPFDCTVLTRPISIGQAVSGSGGF-NSGTEVMTIA-NLKEMIV 221

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A V    +  +K G T  +       +   KFK  +++I P  + ++N           
Sbjct: 222 NAHVNQADVTRMKMGQTVDIEVEA---VPGLKFKGTVQRIAPQATIKNNIKGFA------ 272

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF 415
                +   + +  +R G  A +  
Sbjct: 273 ---AQIFLKNIDPRVRPGMTANLTI 294



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 53/130 (40%), Gaps = 7/130 (5%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            ++S+G+I   D V  ++   +G I    V+ G Q+ +G  L   +D +       +   
Sbjct: 56  VLTSAGDIGPADQV-SVRPEINGRISLLPVDIGDQVKKGELLFALDDQDLQTDRASRLTD 114

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I+     +  EK+  ++  N+   L +A    +E   D    Y    + +     +   R
Sbjct: 115 IEG--AKLTVEKTHRNYERNQR--LSEAKLISQEVFDDGKTDYDLAQNALERSQKA--LR 168

Query: 163 SLKMKLTRMR 172
            +  +L++ R
Sbjct: 169 VVDDQLSKTR 178


>gi|188993494|ref|YP_001905504.1| putative RND superfamily multidrug efflux pump component
           [Xanthomonas campestris pv. campestris str. B100]
 gi|167735254|emb|CAP53468.1| putative RND superfamily multidrug efflux pump component
           [Xanthomonas campestris pv. campestris]
          Length = 450

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 70/191 (36%), Gaps = 26/191 (13%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSIL-------------LPI---------EISVS 45
           + +   PA  +R   + +  ++ +I  + L              P+            + 
Sbjct: 52  DRQTPPPAPSRRGLWIGLAIVLVVIVAAALWWFNRRQVIEVQTAPVVAISAGSSSASVLD 111

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           +SG +     +  + +  +G +++  +E G ++ +G  + T + ++      L    +  
Sbjct: 112 ASGYV-VARRMATVSAQVTGKVREVMIEEGMRVEEGQVMATLDPLDADAQRTLSASQLSA 170

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESR---EEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            R  +D  ++ L   N     L+    ++     Q      +  +  +++ N   +    
Sbjct: 171 ARSQVDNMQAQLAVANADASRLQSLVGAQLVSRSQYEQATAQRDALRAQLQNAQRNVQVA 230

Query: 163 SLKMKLTRMRS 173
           S ++ ++ +RS
Sbjct: 231 SNQLAISAIRS 241



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 79/272 (29%), Gaps = 38/272 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V    +++V   +  K+  +      R++     + L  L +  Q+ L            
Sbjct: 116 VVARRMATVSAQVTGKVREVMIEEGMRVEEGQVMATLDPLDADAQRTL------------ 163

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFANYLKEI-SRDLEQN 269
           S + L+     V     +L     +   +   +  +L   +  E A   ++     L+  
Sbjct: 164 SASQLSAARSQVDNMQAQLAVANADASRLQSLVGAQLVSRSQYEQATAQRDALRAQLQNA 223

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--------LMKI 321
           QR      ++L I     +   + +P AG +V  ++                    +  I
Sbjct: 224 QRNVQVASNQLAISAIRSDFNVVRAPFAG-VVTAKAAQPGEIVSPLSAGGGFTRTGIGTI 282

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V   +   I  +V    I  V+           Y + +       +  I P   +     
Sbjct: 283 V-DMESLEIEVEVGESYIGRVQPKMPVEAVLNAYPEWK---IPGEVIAIIPTADRGKAT- 337

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                  V +++   A    +  +       V
Sbjct: 338 -------VKVRV---ALKVKDPRIVPEMGVRV 359


>gi|332139719|ref|YP_004425457.1| putative cation efflux system protein [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327549741|gb|AEA96459.1| putative cation efflux system protein [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 672

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 54/143 (37%), Gaps = 16/143 (11%)

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            D +  LT  +  ++  T  +P  G +          + +    +M I    +  ++ A+
Sbjct: 194 EDVVETLTKTKNVQQTVTFSAPQTGFVDNLNIR-EGFFIKPGVTVMSIGALDE-VWVDAE 251

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V  +Q   + +G   T+       +  K ++ +++ + P + Q    L       V L+ 
Sbjct: 252 VFERQTAQIVEGLPVTMTL---DFLPGKTWQGVVDYVYPTLEQSTRTL------RVRLR- 301

Query: 394 TDLAFSDNNIELRNGFPAEVLFT 416
               F++ +  L+    A+V   
Sbjct: 302 ----FANQDYTLKPNMFAQVTIH 320



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 65  GIIKKFQVE-NGSQILQGTPLLTF-EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           G I+   V+ +G  + +G PL +           +L     +N +  I   +S L+ L  
Sbjct: 133 GWIETLHVKASGEYVKKGEPLYSLYSPELVNAQEELLLAMRRNNKDLIVAARSRLNALQV 192

Query: 123 KYDVLEKAFESREEQ 137
             DV+E   +++  Q
Sbjct: 193 PEDVVETLTKTKNVQ 207


>gi|257455944|ref|ZP_05621161.1| secretion protein HlyD [Enhydrobacter aerosaccus SK60]
 gi|257446690|gb|EEV21716.1| secretion protein HlyD [Enhydrobacter aerosaccus SK60]
          Length = 405

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/380 (12%), Positives = 105/380 (27%), Gaps = 91/380 (23%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +  E     + +  +G I    V+ G +I  GT L+  +  E            
Sbjct: 99  VTIQGHMEVEQTP--VAAKVAGRIANIYVKEGDEISVGTRLIDMDSPEIN---------- 146

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                 ++  ++  +   ++ D        +E ++  +                      
Sbjct: 147 ----AKVEEAQAGKELAQSQLDKANNGARPQEIEMAKY---------------------- 180

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                               +    ++     +     +  L  +  +S+     Q+R  
Sbjct: 181 --------------------QYDAAQSAADLAKVTYERINRLAAEGLMSR-----QKRDE 215

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +      +  +       + +    +  + A             Q   +    KL   
Sbjct: 216 AYTNYVASVDKAKIAKAQYELAKTGARSEDKTA------------AQAQVSQVEGKLKEA 263

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHV 342
              +E+  + SPIAG IV N          Q  PLM IV P  +   +   VT   + H 
Sbjct: 264 MVAKEEANLKSPIAG-IVDNVIVKPGQVVGQGVPLMTIVDPKDQWVVL--NVTENNLNHF 320

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ-------QDNNLQTQEYYEVILKITD 395
             G   +   P  +   +   +        ++S           +      +E+  + + 
Sbjct: 321 AVGSEFSGTVPALSVNNQPYRQVFKVYASSVLSDFATWRPTNSKDGFDMRTFEIRARPS- 379

Query: 396 LAFSDNNIELRNGFPAEVLF 415
                ++  LR G    V  
Sbjct: 380 ----QSDTRLRQGMTVLVDI 395


>gi|197284515|ref|YP_002150387.1| hypothetical protein PMI0618 [Proteus mirabilis HI4320]
 gi|194682002|emb|CAR41468.1| HlyD-family secretion protein [Proteus mirabilis HI4320]
          Length = 328

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 96/296 (32%), Gaps = 34/296 (11%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +  V E A  ++ + L       +            S   SL +     RS  + +   
Sbjct: 55  AELQVDEGAPVTKGQLLGQLDDAPYINALNKAYGERDSAIASLALMEAGYRSEEIAQA-- 112

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           ++  SL RA     +      ++L  +  +S NDL+                 + +    
Sbjct: 113 QSDVSLKRAAWQYAENFYKRQQDLANRKVISANDLD--------------SARNNRNQAA 158

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             +    D+ N     Y +E   D++  +       + +   E   +   + SP  GTI+
Sbjct: 159 AALKAAQDKLNQYQNGYRQE---DIDMARGQVLQAKAAVAQAELNLQDTQLTSPAEGTIL 215

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             ++           P+   V  +   ++RA ++   +          +   +    ++K
Sbjct: 216 T-RAVEPGTILSAGSPVFT-VSLTNPVWVRAYISENHLGEAIPNREVYL---YTDSRKDK 270

Query: 362 KFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
            +   I  + P       S +   L+T   Y + + +TD      +  LR G P  
Sbjct: 271 PYHGTIGFVSPTAEFTPKSVETPELRTDLVYRIRVVVTDA-----DDSLRQGMPVT 321



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 89/292 (30%), Gaps = 23/292 (7%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + + QV+ G+ + +G  L   +D    + ++       +    +   ++      ++ 
Sbjct: 52  GKLAELQVDEGAPVTKGQLLGQLDDAPYINALNKAYGERDSAIASLALMEAGY---RSEE 108

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               ++  S +     +   ++     + N  + S    L                 ++K
Sbjct: 109 IAQAQSDVSLKRAAWQYAENFYKRQQDLANRKVIS-ANDLDSARNNRNQAAAALKAAQDK 167

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +        D+   + L  K AV+Q +LN Q+  +          I  +      I
Sbjct: 168 LNQYQNGYRQEDIDMARGQVLQAKAAVAQAELNLQDTQLTSPA---EGTILTRAVEPGTI 224

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                            +   + +N    A    ++ +   +R+ K    P  GTI +  
Sbjct: 225 LSAGSPVFTVSLTNPVWVRAYISENHLGEAIPNREVYLYTDSRKDK----PYHGTIGFVS 280

Query: 305 ---SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRF 352
               F+  +                    R +V        +++G   T++F
Sbjct: 281 PTAEFTPKSVETP--------ELRTDLVYRIRVVVTDADDSLRQGMPVTLKF 324


>gi|154706990|ref|YP_001424250.1| multidrug resistance protein A [Coxiella burnetii Dugway 5J108-111]
 gi|154356276|gb|ABS77738.1| multidrug resistance protein A [Coxiella burnetii Dugway 5J108-111]
          Length = 331

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/261 (10%), Positives = 77/261 (29%), Gaps = 24/261 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  + ++        + R E+ +       +     F   ++           ++++
Sbjct: 41  QADVINVASRASGTVSEIDVRNEEHVQKGQLLFTIDPAPFTIELNKAQAQRDATRQKIQA 100

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
             +            +A L+  + +   +  L +K  VS++D                  
Sbjct: 101 ADMAVKSARATVVERKAELTHTRLETKRILTLMKKQFVSRSD------------------ 142

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +      H+ E    A       + E   +L           + +   +   +   + 
Sbjct: 143 -GDLAIKNLHVAEAALNAAQNQLEEMIEKRGELGDKNAQLRLAQAAVEKAKLDLQYTRVF 201

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P +G I         +     QPL  ++   +  + +A     Q+  +  G  AT++  
Sbjct: 202 APTSGYIANFNLRH-GDVVSAYQPLFALI-EDQTWWAQANFKETQLARIHTGEQATIKLD 259

Query: 354 HYADIREKKFKAIIEKIDPII 374
            Y       F   +  ++   
Sbjct: 260 MYPHQI---FIGKVVDVNKDS 277



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 68/189 (35%), Gaps = 9/189 (4%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +++I+ I G   W        +  +      + +V+ + S  SG + +  V N   + 
Sbjct: 12  LFIIAILSIGGYFYWQHQNRYPSTDDAY----IQADVINVASRASGTVSEIDVRNEEHVQ 67

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT-----EKSALDFLNNKYDVLEKAFESR 134
           +G  L T +    T  ++  +      R  I       + +    +  K ++     E++
Sbjct: 68  KGQLLFTIDPAPFTIELNKAQAQRDATRQKIQAADMAVKSARATVVERKAELTHTRLETK 127

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
               L        +   +    +     +L     ++  +   R +L +K++ LR   ++
Sbjct: 128 RILTLMKKQFVSRSDGDLAIKNLHVAEAALNAAQNQLEEMIEKRGELGDKNAQLRLAQAA 187

Query: 195 HQKDLTMMK 203
            +K    ++
Sbjct: 188 VEKAKLDLQ 196


>gi|58581623|ref|YP_200639.1| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58426217|gb|AAW75254.1| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 428

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 85/278 (30%), Gaps = 28/278 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y +    + + S     L S + D    K+L    A+S 
Sbjct: 128 EGAVQQAEANLAKTVRQVRGLYRSVEGAQAELSAREVALRSARSDFARRKDLASTGAISN 187

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L                     ++ L         +   F      +      NQ   
Sbjct: 188 EEL------------------AHARDELAVAEAAVSGSRESFERNRALVDDSAVANQPDV 229

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L        +  +++P++G +   ++       Q    LM +VP  +  ++ A 
Sbjct: 230 QAAAAQLRQAYLNHARTGVVAPVSGYVAR-RAAQVGQRVQPGSVLMLVVPL-EQVWVEAN 287

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----E 385
               Q++H++ G    +    Y        + +++ +            N         +
Sbjct: 288 FKETQLKHMRLGQEVELHSDLYGGGVSYTGRIQSLGLGTGSAFSLLPAQNASGNWIKIVQ 347

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
              V + +     + N + +      EV    +  ++ 
Sbjct: 348 RVPVRIAVDSKQLASNPLRIGLSMKVEVKLHDQQGSVL 385



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 73/197 (37%), Gaps = 17/197 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSP 62
                  A+L+ + +++I+ IIGL+ W  L+       + +         + N V+I   
Sbjct: 45  AAPSKRRAALRIVAIVAILAIIGLVVWYFLVGRWHEDTDDA-------YVQGNQVQITPM 97

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +     E+G ++ +G  L+  +  +T   +   + ++      +     +++    
Sbjct: 98  VGGTVVSIGAEDGMRVERGQLLVQLDPADTEGAVQQAEANLAKTVRQVRGLYRSVEGAQA 157

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +    E A  S          K  ++   + N  ++     L +      ++  +R   E
Sbjct: 158 ELSAREVALRSARSDFA--RRKDLASTGAISNEELAHARDELAVAEA---AVSGSRESFE 212

Query: 183 NKSSLLRALLSSHQKDL 199
              +L+     ++Q D+
Sbjct: 213 RNRALVDDSAVANQPDV 229


>gi|294853725|ref|ZP_06794397.1| HlyD family secretion protein [Brucella sp. NVSL 07-0026]
 gi|294819380|gb|EFG36380.1| HlyD family secretion protein [Brucella sp. NVSL 07-0026]
          Length = 310

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/349 (12%), Positives = 100/349 (28%), Gaps = 79/349 (22%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++   V+ G ++  G P+ T ED +                  I   ++       +  +
Sbjct: 38  VRDIAVKRGDRVEAGEPIATVEDTD----------------ARIAVAQAEAALAQAQAQL 81

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                  R E++                                          LE    
Sbjct: 82  ANLQVGKRPEEIAV----------------------------------------LEAAVR 101

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             RA     Q+ L   ++L  +   +Q  L+     +  +   + ++       +  +  
Sbjct: 102 SARAQADDAQRTLLRTRDLARRGVATQAQLDDAATQLEVAEAAIGQSTANL--AVGKLPA 159

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             +E                   +       ++L   +  R Q+TI +P AG I      
Sbjct: 160 RPEEIKA---------------AENAVKSAEAQLQTAKWQRAQRTIEAPAAGRITDV-VR 203

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +  + A  S P++ ++P      ++  +  ++   V  G         + D      +A 
Sbjct: 204 NPGDIAGPSAPVLTMLP-DGAVKLKVYIPEERFSDVAVGSV----LSVHCDGCAPGLQAR 258

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +  + P        + + E  + ++ + +    D    L+ G   +V  
Sbjct: 259 VSYVSPDPEFTPPVIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 307


>gi|282858192|ref|ZP_06267385.1| putative efflux transporter, MFP component, RND family
           [Pyramidobacter piscolens W5455]
 gi|282583975|gb|EFB89350.1| putative efflux transporter, MFP component, RND family
           [Pyramidobacter piscolens W5455]
          Length = 383

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 94/302 (31%), Gaps = 21/302 (6%)

Query: 116 ALDFLNNKYDVLEKAFESREE-QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
             +    + D    A   R E  ++  L       +                   R+ ++
Sbjct: 25  RAEAPAKQPDAPVSAPRPRVEVAVVKRLSSVQQGINTTSTLQALEEVILNPKVTGRIDNL 84

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            + + DL      L  L S +Q+      ++  + AVS+ +L+Q    +  +  EL    
Sbjct: 85  VVAKGDLVEAGDTLVVLDSRNQEAEYN--SMQAQVAVSKAELSQSAVTLADAKRELDRY- 141

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                 LR       +     +   +       +         + L        +  + +
Sbjct: 142 ----GRLRKSGYATQQEYDTRSTTYQAAVAANAKAAAQVKQAQANLDAQAVLLSEYQLKA 197

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           PI G I+ +   +     + +  +++I         R  +  + +  ++ G  A + F  
Sbjct: 198 PIKGVILDDYDLTLGALVKDATNVLRIG-RVDRLKARVDIPERDMGRLRLGMDAVLTFES 256

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
            +      F   +  IDP I+     +  +      + + + A      +LR G  A VL
Sbjct: 257 LSGQT---FYGTVTLIDPYINTSTRTIGAE------ITVDNQA---TGFKLRPGMFARVL 304

Query: 415 FT 416
             
Sbjct: 305 LV 306



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 8/61 (13%), Positives = 17/61 (27%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V  G  +  G  L+  +        +  +  +   +  +      L     + 
Sbjct: 79  GRIDNLVVAKGDLVEAGDTLVVLDSRNQEAEYNSMQAQVAVSKAELSQSAVTLADAKREL 138

Query: 125 D 125
           D
Sbjct: 139 D 139


>gi|268590206|ref|ZP_06124427.1| macrolide efflux protein MacA [Providencia rettgeri DSM 1131]
 gi|291314487|gb|EFE54940.1| macrolide efflux protein MacA [Providencia rettgeri DSM 1131]
          Length = 368

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 65/194 (33%), Gaps = 14/194 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++  V ++G++     V ++ +  SG ++   V+ G  + +G  L   +  +  + +   
Sbjct: 45  LDKQVLATGKLDAVRKV-DVGAQVSGQLQTLYVKEGDYVKKGDLLAVIDPKKAQNDVTES 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYD-----VLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           +   + L  ++   ++ L      Y        ++A   +E        +        + 
Sbjct: 104 EAMTRELEANLSLVQAELRLAQLTYQRHLSLAKQQAVSQQELDKAKTDVEVKKAQVATYQ 163

Query: 155 YGISSVYRSLKMKLTRMR--SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE----- 207
             I     +L    T ++   I      +      L+       ++   +  L +     
Sbjct: 164 AQIKRNQATLDSAKTNLKYTQITAPMDGIVTFIKTLQGQTVIAAQEAPTILTLADLDTML 223

Query: 208 -KNAVSQNDLNQQE 220
            K  VS+ D+   E
Sbjct: 224 VKAEVSEADVIYLE 237



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 101/289 (34%), Gaps = 26/289 (8%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           ++    +VF     +     K  L   +   + ++D+  + S     L   + D     +
Sbjct: 27  FNREEVEVFQTVDVTRGDLDKQVLATGKLDAVRKVDVGAQVSGQLQTLYVKEGDYVKKGD 86

Query: 205 LFE-------KNAVSQNDLN--QQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLE 254
           L         +N V++++    + E  +     ELR   +  Q+++     +   +  L+
Sbjct: 87  LLAVIDPKKAQNDVTESEAMTRELEANLSLVQAELRLAQLTYQRHLSLAKQQAVSQQELD 146

Query: 255 FANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
            A    E+    +   Q       + L   +   +   I +P+ G + + ++        
Sbjct: 147 KAKTDVEVKKAQVATYQAQIKRNQATLDSAKTNLKYTQITAPMDGIVTFIKTLQGQTVIA 206

Query: 314 QSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
             +   ++ +        ++A+V+   + +++ G  A+  F        KKF   ++   
Sbjct: 207 AQEAPTILTLA-DLDTMLVKAEVSEADVIYLEPGQDAS--FTVLGAPD-KKFSGQLK--- 259

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             I      +    +Y    ++ +     + ++L+    A+V    ++ 
Sbjct: 260 -DILPTPEKINDAIFYYARFEVPNP---QHLLKLQ--MTAQVTIELESR 302


>gi|153807981|ref|ZP_01960649.1| hypothetical protein BACCAC_02267 [Bacteroides caccae ATCC 43185]
 gi|149129590|gb|EDM20804.1| hypothetical protein BACCAC_02267 [Bacteroides caccae ATCC 43185]
          Length = 353

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 63/184 (34%), Gaps = 15/184 (8%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           + K +   I E                  ++   +    +        +   E+  + +P
Sbjct: 111 DAKKLSLEIAEQEQSKQKALYEKGGVTMSEMRNTEVKVTNARYDYENAQLNLEKMKVKAP 170

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G IV    +++    +Q +P++ ++      Y+   +    I++VK+     +   HY
Sbjct: 171 FDGVIVDLPHYTTDIRVEQGKPVVSLM-AYDKMYMDINLPESSIRYVKEAQPVYI--THY 227

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             I     +  I ++ P IS +         Y+  + +      +N ++LR G  A+   
Sbjct: 228 -TIPGDTLRGKISELSPAISSETRT------YKGKVLVD-----NNQLKLRPGMFAKADI 275

Query: 416 TAKN 419
               
Sbjct: 276 VVDR 279


>gi|332359575|gb|EGJ37393.1| ABC superfamily ATP binding cassette transporter, permease
           [Streptococcus sanguinis SK49]
          Length = 421

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL              ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYATEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNSLKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADNEVTTAQIEAEKAQVTAQTES 208


>gi|222035810|emb|CAP78555.1| Multidrug resistance protein mdtN [Escherichia coli LF82]
 gi|312948676|gb|ADR29503.1| multidrug resistance protein MdtN [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 343

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 87/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFSIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L  +  VS  ++++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L + +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFSIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|125717735|ref|YP_001034868.1| ATP-binding cassette transporter-like protein [Streptococcus
           sanguinis SK36]
 gi|323351834|ref|ZP_08087485.1| ABC superfamily ATP binding cassette transporter, permease
           [Streptococcus sanguinis VMC66]
 gi|125497652|gb|ABN44318.1| ATP-binding cassette transporter-like protein, putative
           [Streptococcus sanguinis SK36]
 gi|322121891|gb|EFX93623.1| ABC superfamily ATP binding cassette transporter, permease
           [Streptococcus sanguinis VMC66]
          Length = 421

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL              ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYATEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNSLKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADSEVTTAQIEAEKAQVTAQTES 208


>gi|40849904|gb|AAR95664.1| plectin 10 [Rattus norvegicus]
          Length = 4552

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1348 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1407

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1408 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1460

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1461 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1519

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1520 AELALRVKAEAEAAREKQR 1538



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2188 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2241

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2242 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2301

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2302 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2358

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2359 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2407



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2325 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2384

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2385 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2442

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2443 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2502

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2503 EKDSLLQRERFIEQ 2516



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1645 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1704

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1705 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1754

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1755 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1813

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1814 LAEEAKRQRQLAEED 1828



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2237 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2296

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2297 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2356

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2357 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2416

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2417 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2447



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1346 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1405

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1406 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1465

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1466 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1525

Query: 291  T 291
             
Sbjct: 1526 V 1526



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1556 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1615

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1616 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1675

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1676 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1735

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1736 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1779



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1841 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1900

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1901 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1960

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1961 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2020

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2021 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2058



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1461 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1514

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1515 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1572

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1573 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1630

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1631 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1662


>gi|326410574|gb|ADZ67638.1| plectin-1 [Brucella melitensis M28]
          Length = 410

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 76/221 (34%), Gaps = 14/221 (6%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+     +    + ++  +    R   + E    DF     +       +  + 
Sbjct: 146 VTAGMQLI--SAQQEYADLQMQITAQTIRRARFEAELKGTDFTYAVPEQ-----TAANKD 198

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++            +F+   +++    +    +  S       L+    L    +   Q+
Sbjct: 199 MVALTRHMVEGERTLFDMRRNNLAAERRALEAQAASYGDEITTLQQSIKLHDTEIQLLQE 258

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDE 250
           ++   K+L ++   +++ L   ER +  +  +       L      Q  + + I  L + 
Sbjct: 259 NVNSSKSLVDRGLAAKSSLRDMERDLSSTRRDALELASFLARARQNQLAVEQRIANLDET 318

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              E A+ L+EI  ++ + QR    ++     + K+  Q +
Sbjct: 319 RRSEAASSLQEIDLNMARMQRRSNSQLEARAEIAKSSGQIS 359


>gi|296391405|ref|ZP_06880880.1| hypothetical protein PaerPAb_24764 [Pseudomonas aeruginosa PAb1]
          Length = 425

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 55/435 (12%), Positives = 122/435 (28%), Gaps = 108/435 (24%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILL------------------PIEISVSSSGEILN 52
           R        + L   + ++  + W +                    P+   +   G +  
Sbjct: 5   RFSFLRRPALPLAVGLAVVAALAWLVFAGGTAKRTEGERWVAVRAAPLVHQIGLVGRLEP 64

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
              VV + +PF+G ++   VE G ++ +G  LL  +  E    +   + ++   R  +  
Sbjct: 65  -GRVVTLAAPFAGNVEALLVEPGQRVAEGQELLRMDTREIAVQVREAQSALLKARRTLQD 123

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +                                                 +      +R
Sbjct: 124 LRDW------------------------------------------ERGEDMARVRRALR 141

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           S  L +   E K    R L          + +L ++ +  + DL    R V  +  + + 
Sbjct: 142 SAQLAQSSTERKLRETRELFQRGIVPRNELDDLEQQASQQRMDLEAARREVESTRAKGQG 201

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   M                        DL      +    ++L         +T+
Sbjct: 202 ENRQIAEM------------------------DLANASVKYETLQAQLDG-------RTV 230

Query: 293 LSPIAGTIVYN----------QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +P AG +V            +   + +   Q Q L  +    +   + AKV+   I  +
Sbjct: 231 RAPFAGIVVAAPGLAGEQGSREPVQAGSKLGQGQALFGLA-SVERLKVSAKVSELDINQL 289

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           ++G    +    +          +I  +            + ++ EV + +  L      
Sbjct: 290 REGQAVEISGDGFEGTT---LAGVIAALGGQALPGMAQGGSPQF-EVTVSVAPLDPRQLQ 345

Query: 403 IELRNGFPAEVLFTA 417
            ++R G  A++  T 
Sbjct: 346 -KIRLGMSAKLTVTT 359


>gi|255592986|ref|XP_002535766.1| Multidrug resistance outer membrane protein mdtP precursor,
           putative [Ricinus communis]
 gi|223522035|gb|EEF26617.1| Multidrug resistance outer membrane protein mdtP precursor,
           putative [Ricinus communis]
          Length = 662

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 20/197 (10%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +D      +    +    +     +L   + + RS +      E + + L+A  +    D
Sbjct: 483 VDANQTLLNQEQHLVAEQLDKSAANLAEAVRKTRSQFSEVQQSEAELATLKAQKAKVAGD 542

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L   +    + AV+                   + + + K  L  I++    A  + +  
Sbjct: 543 LGRYEQAEAEGAVA------------------GQKVTDAKADLDIIDQQILVAEAKTSKA 584

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
              IS    +N      E ++        ++ T+ +P+ G I   +  S        Q L
Sbjct: 585 KAFISNTTIKNNPWVLKEKAEYIANYIQCQRTTLRAPVKGYIANRRVQS-GQQVSPGQLL 643

Query: 319 MKIVPHSKLTYIRAKVT 335
           M IVP     ++ A + 
Sbjct: 644 MNIVPLQD-LWVTANIK 659


>gi|150009936|ref|YP_001304679.1| efflux system periplasmic protein [Parabacteroides distasonis ATCC
           8503]
 gi|149938360|gb|ABR45057.1| periplasmic component of efflux system [Parabacteroides distasonis
           ATCC 8503]
          Length = 408

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 76/223 (34%), Gaps = 20/223 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDL 266
             +++ D    +  +  +  +L  +  E +   ++        E  L      +  + + 
Sbjct: 85  QLIAEMDKINLQAELRSAEAQLASSKTEFEYQQKNYARSKVLHEKQLISDTDYETATYNY 144

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           E+ +  +    + +  + +  E  TI SPI G +V N++               L  I  
Sbjct: 145 EKAKAAYDQSQASMVKVNRNLEYATITSPIDG-VVINRAVEEGQTVAAGFETPTLFTIAA 203

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------DPIISQQ 377
                 + A V    I +V++G   +     Y + +   F+ ++ +I          +  
Sbjct: 204 DLTKMQVIADVDEADIGNVEEGQRVSFTVDAYPNDQ---FEGVVRQIRLGDSESTSSASS 260

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +  T   YEV++        + +++L+    A +       
Sbjct: 261 STSSSTVVTYEVVITAD-----NPDLKLKPRLTANITIYTLER 298



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 67/186 (36%), Gaps = 4/186 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +V+++G +     V E+ +  SGII K   +    +  G  +   + I     +   
Sbjct: 44  ITNTVTATGTVEPVTEV-EVGTQVSGIIDKLYADYNDVVKAGQLIAEMDKINLQAELRSA 102

Query: 100 KVSIKNLRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  + + +   + ++   +    L+ K  + +  +E+           Y  + + +    
Sbjct: 103 EAQLASSKTEFEYQQKNYARSKVLHEKQLISDTDYETATYNYEKAKAAYDQSQASMVKVN 162

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +  Y ++   +  +             +      L +   DLT M+ + + +     ++
Sbjct: 163 RNLEYATITSPIDGVVINRAVEEGQTVAAGFETPTLFTIAADLTKMQVIADVDEADIGNV 222

Query: 217 NQQERI 222
            + +R+
Sbjct: 223 EEGQRV 228


>gi|86747333|ref|YP_483829.1| secretion protein HlyD [Rhodopseudomonas palustris HaA2]
 gi|86570361|gb|ABD04918.1| Secretion protein HlyD [Rhodopseudomonas palustris HaA2]
          Length = 371

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/310 (11%), Positives = 89/310 (28%), Gaps = 14/310 (4%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            ++  +   L        + +     +       +     +     ++     +      
Sbjct: 56  AYVRAQITQLSSRVAGAVKTVAVDDFQRVKAGDLLIQIDPADYIAQVEQAEAAVAGAEAA 115

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             +L N+  L  A +   +      + L  +            R    +  + ++ +   
Sbjct: 116 LDNLANQIDLQNATIEQAEAQSVSAQALEVEAQQEDQRQQALVRTEAGTVQKFQQAVAAY 175

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 +         +       ++   +Q   T     + L   +       I++P  
Sbjct: 176 AKAKADVRAAIAVVAAQRQQMAV-LAGTRQQLTATLHGAKATLDAAKLRLGYTRIVAPFD 234

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   +     +Y      L+ +VP  ++  I A     Q++ V+ G   T+    ++ 
Sbjct: 235 G-VASERQVQPGDYVNTGSNLINVVPLPRVYVI-ANYKETQLRRVRPGQRVTIVADTFSG 292

Query: 358 IREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-DLAFSDNN---IELRNGF 409
                 K  +E+I P    Q      +  T  + +V+ +I   + F+        L  G 
Sbjct: 293 QT---LKGEVERISPASGSQFALLPPDNATGNFTKVVQRIPVRIQFAPGQPLLERLLPGM 349

Query: 410 PAEVLFTAKN 419
                  A +
Sbjct: 350 SVTTRIHADD 359



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 68/193 (35%), Gaps = 2/193 (1%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R     L  ++      I+  + W   +    +V ++ +      + ++ S  +G +K  
Sbjct: 18  RRLAIPLLAVSAAVAFTIVATLRWDAWIG-SRAVQTTDDAYVRAQITQLSSRVAGAVKTV 76

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V++  ++  G  L+  +  +    ++  + ++      +D   + +D  N   +  E  
Sbjct: 77  AVDDFQRVKAGDLLIQIDPADYIAQVEQAEAAVAGAEAALDNLANQIDLQNATIEQAEAQ 136

Query: 131 FESREEQLLDFLGKYHSTCSKVF-NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             S +   ++   +     + V    G    ++       + ++     + +        
Sbjct: 137 SVSAQALEVEAQQEDQRQQALVRTEAGTVQKFQQAVAAYAKAKADVRAAIAVVAAQRQQM 196

Query: 190 ALLSSHQKDLTMM 202
           A+L+  ++ LT  
Sbjct: 197 AVLAGTRQQLTAT 209


>gi|86145061|ref|ZP_01063393.1| hypothetical protein MED222_11628 [Vibrio sp. MED222]
 gi|85837960|gb|EAQ56072.1| hypothetical protein MED222_11628 [Vibrio sp. MED222]
          Length = 345

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 98/270 (36%), Gaps = 25/270 (9%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE--NKSSLLRALLSSHQKDLTMMKN 204
            T  ++ N  + +    L  +L  +     + + L         R+ L++ Q+  T  + 
Sbjct: 96  ETAIQLTNMEVEAQIEFLHAELLDLEIRSPDDIGLLHLKGIEETRSNLNTVQQIQTRYEE 155

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             +K  VS  D      +      +L               +  D  N + A   +E++ 
Sbjct: 156 YRKKGQVSDVDYASIVGMSNSLNNQLNG-------------QKLDYQNAKLAEQERELAG 202

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            + Q +R    +++   ++E+      I SP  G +V            +   L+ I  +
Sbjct: 203 PVSQARRALMKDLALKRVVEQGLA---IKSPYEGRVVDIHVV-EGQRVFEGDELVTIAKN 258

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +    + A + PK +++   G    VRFP+     E +    +E +  + +Q  +  + Q
Sbjct: 259 TIPQVV-AYLDPKYLENAIIGAHTKVRFPN-GSTFEAEIADSVEIVSKLPTQLASPFEGQ 316

Query: 385 E-YYEVILKITDLAFSDNNIELRNGFPAEV 413
             Y +V L  T     +  IE   G   EV
Sbjct: 317 PAYLKVALNFTADLPREYWIE---GMTVEV 343



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 74/212 (34%), Gaps = 7/212 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
              +   KR        + L  ++  +  + +   L     V +   I    + V + S 
Sbjct: 20  KVAYGQAKRGGYRFRWYLILSLVVSPLLFVAY-FFLKTNFLVIAPAIIT--SHPVTLTSK 76

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G++    V++GSQIL+    +   ++E    I+     + +L      +   L  L  
Sbjct: 77  VAGVVGPIPVDDGSQILKSETAIQLTNMEVEAQIEFLHAELLDLEIR-SPDDIGLLHLKG 135

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             +        ++ Q      +     S V    I  +  SL  +L   +  Y N   L 
Sbjct: 136 IEETRSNLNTVQQIQTRYEEYRKKGQVSDVDYASIVGMSNSLNNQLNGQKLDYQN-AKLA 194

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
            +   L   +S  ++ L  MK+L  K  V Q 
Sbjct: 195 EQERELAGPVSQARRAL--MKDLALKRVVEQG 224


>gi|327469599|gb|EGF15068.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK330]
          Length = 421

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL              ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYATEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAKSKANGITATQNSAAIKWETYNRKLASLNSLKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADNEVTTAQIEAEKAQVTAQTES 208


>gi|300022028|ref|YP_003754639.1| hypothetical protein Hden_0497 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299523849|gb|ADJ22318.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 481

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 93/269 (34%), Gaps = 15/269 (5%)

Query: 89  DIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           DI +T   + + ++I+N R    H+D+ +   D L      LE   +  E+ L++   + 
Sbjct: 144 DIGSTFHNNEEILTIRNRRADYSHLDSLRRERDQLGTAISALEAKKQLLEQNLVELSEQQ 203

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            +         +    R +   L    + +   L    ++S LR   +  Q  L      
Sbjct: 204 ENFRVGRI-TQLDQRIREIDADLAATEAQHDMALQTLTRASALRKTDAVSQAYLDKA--- 259

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELREN-----IHEQKNMLRHINELYDEANLEFANYLK 260
            +   V++N +         S +EL        I +  N      +   E  LE A+   
Sbjct: 260 LQDERVTKNTIQSLTERRKGSMVELEAARKFIFIGDSYNDTPQSAQRKMEVALELADVRA 319

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
            +     +        +   T   +     +I S + G +    + +   +    Q LM+
Sbjct: 320 RLEGSKAE-LAVLMTRIDAETRRNEELSSASIRSTVNGRVWEILT-APGEHVNAGQDLMR 377

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           ++       + A V+    Q ++ G  AT
Sbjct: 378 LL-DCGSAMVTASVSETTYQKLRIGQNAT 405


>gi|70733664|ref|YP_257304.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
 gi|68347963|gb|AAY95569.1| HlyD family secretion protein [Pseudomonas fluorescens Pf-5]
          Length = 296

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 62/200 (31%), Gaps = 12/200 (6%)

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHI 244
            ++     L     + +   V +  +       + +  + ++   L +         R  
Sbjct: 49  QIAPDVSGLIQQVQVRDNQLVQRGQVLFSIDQDRFKLALRQAKAALADRQETLAQAQREA 108

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                  NL     L+E      + Q   A+    +   +   ++  + SP+ G +    
Sbjct: 109 KRNRGLGNLVPREQLEESQSREARAQSALAEAQVAVDSAQLNLDRSVVRSPVDGYVNDRA 168

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +   +    +P++ +V  S   +I       ++  +  G    +R          + +
Sbjct: 169 PRTQ-EFVTAGRPVLSVV-DSNSFHIDGYFEETKLDGIHVGQAVDIRV----IGDRARLR 222

Query: 365 AIIEKIDPIISQQDNNLQTQ 384
             +E I   I  +D +  + 
Sbjct: 223 GHVESIVAGIEDRDRSSGSN 242



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 47/119 (39%), Gaps = 6/119 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++V+I    SG+I++ QV +   + +G  L + +       +   K ++ + +  +   +
Sbjct: 46  DIVQIAPDVSGLIQQVQVRDNQLVQRGQVLFSIDQDRFKLALRQAKAALADRQETLAQAQ 105

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                     +++ +      EQL +   +     S +    ++     L +  + +RS
Sbjct: 106 REAKRNRGLGNLVPR------EQLEESQSREARAQSALAEAQVAVDSAQLNLDRSVVRS 158


>gi|254975995|ref|ZP_05272467.1| putative lipoprotein [Clostridium difficile QCD-66c26]
 gi|255093383|ref|ZP_05322861.1| putative lipoprotein [Clostridium difficile CIP 107932]
 gi|255315128|ref|ZP_05356711.1| putative lipoprotein [Clostridium difficile QCD-76w55]
 gi|255517799|ref|ZP_05385475.1| putative lipoprotein [Clostridium difficile QCD-97b34]
 gi|255650913|ref|ZP_05397815.1| putative lipoprotein [Clostridium difficile QCD-37x79]
 gi|306520797|ref|ZP_07407144.1| putative lipoprotein [Clostridium difficile QCD-32g58]
          Length = 407

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/350 (16%), Positives = 110/350 (31%), Gaps = 94/350 (26%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V+ G  + +G  LL+    E        + S+K  +  +D  K++        
Sbjct: 67  GTVQEVYVKLGQNVRKGDELLSISSPE-------LENSVKQSKASLDLAKASYSSATGG- 118

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                 SL+ ++ + ++   N       
Sbjct: 119 --------------------------------------SLEAQVNQAKTALDN------- 133

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +      Q++    K L+E+  +S +   + E            ++ + K  L   
Sbjct: 134 ---AKIQYEESQRNYDNNKILYEQEVISLDQFKKIEF-----------SLEQTKQQLDSA 179

Query: 245 NELYDEANLE-FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              YD A  +          + L+Q Q +         +     ++ T+ SP+ GTI   
Sbjct: 180 QRAYDTATSKSIPQAKALAKKQLDQAQVS-------YNLAMSNLDKLTLTSPVDGTITA- 231

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++F S     QSQP   I+ +  +  +   V    I   KK     V           K 
Sbjct: 232 KNFDSKEMITQSQP-AFIISNPNILEVDLNVAESDIGKFKKDGNVDVIIE--DQRILGKI 288

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             +   +DP  S           Y V + +     ++ N + + G  A+V
Sbjct: 289 DYVPSVVDPQTSL----------YPVKVLV-----NNANNKFKAGMSAQV 323


>gi|260788742|ref|XP_002589408.1| hypothetical protein BRAFLDRAFT_77852 [Branchiostoma floridae]
 gi|229274585|gb|EEN45419.1| hypothetical protein BRAFLDRAFT_77852 [Branchiostoma floridae]
          Length = 1219

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 77/207 (37%), Gaps = 19/207 (9%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
               +    ++  I +L   +  E+     L   +    +  E+R +  +  L +     
Sbjct: 127 TRLQEQKTSQQGQIGSLSDQLSEERVRSAELKQNFTRKLQEQETRLQTQVQNLAQELQEQ 186

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                  + ++ + L+ + T   S +   + L N+  LL     S + +  + + L E+ 
Sbjct: 187 ETRLQTQVQNLTQELQEQNT---SFWTQTVSLSNQ--LLEEKGMSVRLEQNLTRKLEEQE 241

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
                   +    +   T EL+E    Q++ +  ++    E     A   + ++++L++ 
Sbjct: 242 -------TRIRARLQNLTQELQERKTSQRDQVDSMSYQLSEERARSAELEQNLTQELQEQ 294

Query: 270 Q-------RTFADEMSKLTILEKTREQ 289
           +       +  +DE+SK       +E+
Sbjct: 295 ETRLLTQLQNLSDELSKEKNRGDRQER 321



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 5/198 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           ET +     K  ++ L   +DT    LD L+ +    +       + L   L +      
Sbjct: 67  ETEEETTRLKNQVERLSSLVDTLLPRLDSLSAELSKEKVKSAQMVQNLTRELQEQQIRLL 126

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +S    +     ++    +   +L  K +  R L     +  T ++NL ++  
Sbjct: 127 TRLQEQKTSQQGQIGSLSDQLSEERVRSAEL--KQNFTRKLQEQETRLQTQVQNLAQE-- 182

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             Q    + +  V   T EL+E           ++    E         + ++R LE+ +
Sbjct: 183 -LQEQETRLQTQVQNLTQELQEQNTSFWTQTVSLSNQLLEEKGMSVRLEQNLTRKLEEQE 241

Query: 271 RTFADEMSKLTILEKTRE 288
                 +  LT   + R+
Sbjct: 242 TRIRARLQNLTQELQERK 259



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 71/207 (34%), Gaps = 13/207 (6%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG---KYH 146
           ++T      +++  +  R      ++    L  +         S   QLL+  G   +  
Sbjct: 172 LQTQVQNLAQELQEQETRLQTQV-QNLTQELQEQNTSFWTQTVSLSNQLLEEKGMSVRLE 230

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS--LLRALLSSHQKDLTMMKN 204
              ++      + +   L+     ++    ++ D  +  S  L      S + +  + + 
Sbjct: 231 QNLTRKLEEQETRIRARLQNLTQELQERKTSQRDQVDSMSYQLSEERARSAELEQNLTQE 290

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E+    +  L  Q   +   + EL +  +      R++ +       +F   L  +S 
Sbjct: 291 LQEQ----ETRLLTQ---LQNLSDELSKEKNRGDRQERNMTQTLLLQETKFIGILNSLSD 343

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKT 291
           +L + +      ++ L+ ++   +  T
Sbjct: 344 ELSEERDRNRGLVTNLSQVQLQLDNIT 370


>gi|197104348|ref|YP_002129725.1| HlyD family secretion protein [Phenylobacterium zucineum HLK1]
 gi|196477768|gb|ACG77296.1| HlyD family secretion protein [Phenylobacterium zucineum HLK1]
          Length = 322

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 55/167 (32%), Gaps = 12/167 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
             ++G+   E  ++++ +  +G+++   V+ G  + +G  L   ED E           +
Sbjct: 52  AVANGKADVEGGIIQVAARRAGVVRDVLVQEGEDVTKGQILARLEDDEPRLQAARAAAEV 111

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  R  +   +            ++ +   REE+ L  L   +   ++  +     V  +
Sbjct: 112 RQARAALALLE------------VQLSAAQREERRLQGLAPSNFVAAQKLDQARDGVREA 159

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
               L +   +      L          +     +  +++      A
Sbjct: 160 QAKILAQQAVVATAEARLAEARYDQELSIIRAPVEGRIVRRYANPGA 206



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 49/148 (33%), Gaps = 3/148 (2%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
             G + V   +     R   +  + L  E +      +L+  + D      L    A ++
Sbjct: 54  ANGKADVEGGIIQVAARRAGVVRDVLVQEGEDVTKGQILARLEDDEP---RLQAARAAAE 110

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
               +    + +  L   +    +   L   N +  +   +  + ++E    +   Q   
Sbjct: 111 VRQARAALALLEVQLSAAQREERRLQGLAPSNFVAAQKLDQARDGVREAQAKILAQQAVV 170

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIV 301
           A   ++L      +E   I +P+ G IV
Sbjct: 171 ATAEARLAEARYDQELSIIRAPVEGRIV 198


>gi|148233442|ref|NP_001083435.1| differentially expressed in FDCP 6 homolog [Xenopus laevis]
 gi|82202512|sp|Q6PA69|DEFI6_XENLA RecName: Full=Differentially expressed in FDCP 6 homolog
 gi|38014495|gb|AAH60433.1| MGC68775 protein [Xenopus laevis]
          Length = 596

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/222 (9%), Positives = 71/222 (31%), Gaps = 6/222 (2%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +      +  +   +  L    +   +  R   +  ++A +    +   L+   E ++
Sbjct: 293 EWVTAIQTAIRLQQSGSLSLHRELQKRRREQRELREQRRAARELEMQRLAELQNEKERQQ 352

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT---RMRSIYLNRLDLENKSSLLRALL 192
           ++L         +   +         +  +MK     ++R     R  ++ +  L     
Sbjct: 353 QELEQLREAQKKSEEIMLQEQHRHREQQEEMKRQLECQLREAEEARASMQAEMQLKETEA 412

Query: 193 SSHQKDLTMMKNL---FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
              ++ +  ++ L    ++    +      E     +  +L     E+  +L  + E   
Sbjct: 413 VQQKQRIQELEQLQDHLQEALAQEIRARHDEEAFRHAQSKLLMQEEEKLRVLLRMREEQT 472

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +         +E+ +++    +   +   +L  + + RE+  
Sbjct: 473 QYVERAQKEKQELQQEMAVTSKELQEAQKQLEDVRENRERAD 514


>gi|78188314|ref|YP_378652.1| secretion protein HlyD [Chlorobium chlorochromatii CaD3]
 gi|78170513|gb|ABB27609.1| Secretion protein HlyD [Chlorobium chlorochromatii CaD3]
          Length = 324

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 66/190 (34%), Gaps = 24/190 (12%)

Query: 239 NMLRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTR------EQK 290
            +   I    +E  +     ++  ++   L   +R    + ++L    +        ++ 
Sbjct: 63  KIQSSIAGRIEEIVVSEGEMVRKGQVLALLSSTERAALLDAARLQGKSEEAYWKKVYKET 122

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            +L+P+ G ++  +S         S  L  +   S    ++A V    I  VK G  AT+
Sbjct: 123 AVLAPLDGQVI-VRSIEPGQMVNGSDSLFVL---SDRLMVKAFVDETDIGRVKVGQQATI 178

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           +   Y DI     +  +E ID     Q+N      YY       D+         R+G  
Sbjct: 179 QLDAYPDI---SVRGKVEHIDFESRLQNNVTM---YYV------DIIPEQIPSVFRSGMS 226

Query: 411 AEVLFTAKNT 420
           A +    K  
Sbjct: 227 ATITIIVKQK 236



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 19/110 (17%)

Query: 18  KRMTLLSIIGIIGLITWSILLP------------------IEISVSSSGEILNEDNVVEI 59
           K +     + ++ L+ W  L                    I   V+++G +  ++ +  I
Sbjct: 6   KLIVSAIALFVVALVAWFFLFKGNKGEEERYRDVQVVRGAISDVVATTGVVEPKNRLK-I 64

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +S  +G I++  V  G  + +G  L      E   L+D  ++  K+   +
Sbjct: 65  QSSIAGRIEEIVVSEGEMVRKGQVLALLSSTERAALLDAARLQGKSEEAY 114


>gi|311693909|gb|ADP96782.1| efflux transporter, RND family, MFP subunit [marine bacterium HP15]
          Length = 380

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 60/179 (33%), Gaps = 24/179 (13%)

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR----------- 271
           V    + L E + E + +L   +E    A L + + ++++  DL   +R           
Sbjct: 105 VESLAVGLGEQVREGQTLLTIADEGRSAAVLRWQSRVRKLEADLAAARRLRASNLAAESE 164

Query: 272 ------TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
                   A   ++LT   +     T  +P  GTI      +  +  Q   PL ++V   
Sbjct: 165 VLALESELAAANAELTSARQAISHLTPEAPFDGTINRKSVDT-GDLVQVGSPLFQLV-RV 222

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                 A++  + +  V  G    V       +   +   I+  +    S +  +   +
Sbjct: 223 DRLKATAQIPQQSVGDVATGQAVRV-----DLLDGSRLSGIVTFVASAASPETRSFAVE 276



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 60/202 (29%), Gaps = 12/202 (5%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G++    +V  + +   G ++   V  G Q+ +G  LLT  D   +  +   +  ++ L
Sbjct: 86  QGQLEPWSSV-MLSAQVPGRVESLAVGLGEQVREGQTLLTIADEGRSAAVLRWQSRVRKL 144

Query: 107 RCHIDTEKSALD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +   +          ++   LE    +   +L            +    G  +    
Sbjct: 145 EADLAAARRLRASNLAAESEVLALESELAAANAELTSARQAISHLTPEAPFDGTINRKSV 204

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
               L ++ S     +    +   L+A     Q+ +             + DL    R+ 
Sbjct: 205 DTGDLVQVGSPLFQLV----RVDRLKATAQIPQQSVGD----VATGQAVRVDLLDGSRLS 256

Query: 224 YKSTLELRENIHEQKNMLRHIN 245
              T        E ++    I 
Sbjct: 257 GIVTFVASAASPETRSFAVEIA 278


>gi|262369028|ref|ZP_06062357.1| membrane fusion protein [Acinetobacter johnsonii SH046]
 gi|262316706|gb|EEY97744.1| membrane fusion protein [Acinetobacter johnsonii SH046]
          Length = 414

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 56/165 (33%), Gaps = 12/165 (7%)

Query: 15  ASLKRMTLLSIIGIIGLITW----------SILLPIEISVSSSGEILNEDNVVEIKSPFS 64
                + LL ++    +  W           +  P+  +V +SG +        I S  +
Sbjct: 13  KPWIMIILLVLLVSFAIYRWWQGPLLPSYEVVSSPLIQTVVASGRVEKVSRTQ-IGSEIT 71

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++ +  V+ G ++ +G  LL  +  E +  +   + ++K L       ++  D  N K 
Sbjct: 72  GVVLERLVQEGDRVSRGDVLLVLKSDEISAQVRQAEAALKEL-ATTRRPQAEFDLANAKV 130

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            + +   E+   +  +          K       +       +L 
Sbjct: 131 QLEQAQREAVRRRNTELGILSAEEREKSIEAEKLARNNLESARLK 175



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 86/280 (30%), Gaps = 26/280 (9%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL------ENKSSLLRALLSSHQKDLTM 201
              KV    I S    + ++        ++R D+      +  S+ +R   ++ ++  T 
Sbjct: 57  RVEKVSRTQIGSEITGVVLERLVQEGDRVSRGDVLLVLKSDEISAQVRQAEAALKELATT 116

Query: 202 MKNLFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            +   E +   ++  L Q +R   +        +  ++       E     NLE A    
Sbjct: 117 RRPQAEFDLANAKVQLEQAQREAVRRRNTELGILSAEEREKSIEAEKLARNNLESARLK- 175

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                L  ++        +L  L+    +  I + ++G I+        +  Q SQ L  
Sbjct: 176 --VASLAPDKVEETKLREQLAALQAQLAKTKIRAEVSGIILTRNV-EPGDLVQPSQTLFT 232

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           I      T IR     + +  +     A V    Y D     F A I  I P I  Q   
Sbjct: 233 IA-LDGATEIRVPFDERNLPLLALQQKAAVITDAYPDQ---PFPAHINFIAPSIDAQRGT 288

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +       V L +  +        LR      V       
Sbjct: 289 VD------VRLTVDPV-----PDFLRQDMTVSVNVETNKR 317


>gi|218702237|ref|YP_002409866.1| putative HlyD family secretion protein [Escherichia coli IAI39]
 gi|218372223|emb|CAR20085.1| putative HlyD family secretion protein [Escherichia coli IAI39]
          Length = 355

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/404 (12%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + N+ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETNDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|154251555|ref|YP_001412379.1| RND family efflux transporter MFP subunit [Parvibaculum
           lavamentivorans DS-1]
 gi|154155505|gb|ABS62722.1| efflux transporter, RND family, MFP subunit [Parvibaculum
           lavamentivorans DS-1]
          Length = 414

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 75/219 (34%), Gaps = 19/219 (8%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHE--QKNMLRHINELYDEANLEFANYLKEIS 263
             + A ++  L+  +  +  +  EL     +  + + L  I+ +  +        ++ I+
Sbjct: 129 AAEVAGARARLSDLQSQLAGAEAELVLARRQFGRNSDLAKIDAVSRDDLDTSETLVQTIA 188

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP---LMK 320
             +   +     + S +   E +     I +PI GT+   Q+         +Q    +M+
Sbjct: 189 ARIGSLKAQIEQQKSSVDAGETSLGYTKIFAPIDGTVTS-QTALQGQTLNANQTAPVVMQ 247

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           I  +     + A+V    +  +K G      F        +++ + + +I P        
Sbjct: 248 IA-NLDTMTVEAQVAEADVGKLKAGMPVY--FTTLGTPD-RRWASTVRQILP----TPEI 299

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +     Y V++ I      +    L     A+V F    
Sbjct: 300 VNEVVLYTVLVDI-----ENEGGVLMKDMTAQVFFVLDE 333



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 58/134 (43%), Gaps = 7/134 (5%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE++V++ G +  ++ V ++ +  SG +    VE G Q+ +G  L   +       +   
Sbjct: 77  IELTVTALGSLQPKEYV-DVGAQVSGQLDIVHVEVGDQVKKGDLLAEIDARVYAAEVAGA 135

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  + +L+  +   ++ L     ++        + +   +D + +     S+     I++
Sbjct: 136 RARLSDLQSQLAGAEAELVLARRQFG------RNSDLAKIDAVSRDDLDTSETLVQTIAA 189

Query: 160 VYRSLKMKLTRMRS 173
              SLK ++ + +S
Sbjct: 190 RIGSLKAQIEQQKS 203


>gi|117617817|ref|YP_857493.1| macrolide-specific efflux protein MacA [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559224|gb|ABK36172.1| macrolide-specific efflux protein MacA [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 387

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 88/264 (33%), Gaps = 23/264 (8%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN--AVSQNDLNQQERIVYKSTLELR 231
             + ++D+  + S     L+          +L  +    ++QN+L   E  +     +L+
Sbjct: 55  QAIEQVDVGAQVSGQVTYLAVEAGQKVKQGDLLAEIDPLIAQNNLKTAEADLASRRAQLK 114

Query: 232 ENIHE--------QKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTI 282
               +        ++       E    A+LE A  L  ++  +L+  Q    +   K+  
Sbjct: 115 IKQAQLKQNELSWRRQQQMFRQEASSRADLESAEALLAVTKAELQSAQAEVENAQIKVER 174

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQ 340
            +       I +P+ GT+V             SQ +  ++  +  +   ++A+++   + 
Sbjct: 175 TKTELGYNRIQAPMDGTVVSI-VTRQGQTLAASQTVPTLLKLANLETMTVKAQISEADVT 233

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE----YYEVILKITDL 396
            VK G           D R       +E     I++Q  +  T      YY  +  +   
Sbjct: 234 RVKAGMPVYFTLMGDPDTRYHGTLRTVELAPTNINEQATSTTTTSNAAVYYYALFDVP-- 291

Query: 397 AFSDNNIELRNGFPAEVLFTAKNT 420
              + +  LR     +V       
Sbjct: 292 ---NPDHTLRVAMTTQVTIVLGER 312



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 56/144 (38%), Gaps = 11/144 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V +SG +   + V ++ +  SG +    VE G ++ QG  L   + +   + +   
Sbjct: 44  VEQTVLASGVLQAIEQV-DVGAQVSGQVTYLAVEAGQKVKQGDLLAEIDPLIAQNNLKTA 102

Query: 100 KVSIKNLRCHIDTEKSAL----------DFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +  + + R  +  +++ L            +  +        ES E  L     +  S  
Sbjct: 103 EADLASRRAQLKIKQAQLKQNELSWRRQQQMFRQEASSRADLESAEALLAVTKAELQSAQ 162

Query: 150 SKVFNYGISSVYRSLKMKLTRMRS 173
           ++V N  I       ++   R+++
Sbjct: 163 AEVENAQIKVERTKTELGYNRIQA 186


>gi|303249232|ref|ZP_07335468.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           fructosovorans JJ]
 gi|302489372|gb|EFL49324.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           fructosovorans JJ]
          Length = 406

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/351 (11%), Positives = 97/351 (27%), Gaps = 33/351 (9%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +   P+  +V   G +      V ++S  SG++K+     G  + +G PL+  +      
Sbjct: 55  ATTAPL--AVDGIGHV-YALRTVNVRSQVSGVLKETYFSEGDLVKEGQPLILIDPAPYKA 111

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +D    ++   R      ++  D+L  K  V +      + +      +      +V  
Sbjct: 112 QLDEAVSTLARDRA--TAAQARRDWLRYKDLVAQAVISQDDYEQKRTAYQQDLEQVRVDE 169

Query: 155 YGISSVYRSLK-----------MKLTRMRSIYLNRLD-----LENKSSLLRALLSSHQKD 198
             + +   +L              L + ++  L + +       N+   +    S  +K 
Sbjct: 170 ASVQNAKVNLGYCYINAPCTGVAGLQQYKTGNLIKSEDYIIVTINQIEPINVQFSVAEKY 229

Query: 199 LTMMKNLFEKN--AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           L  ++    K    V  +     E +       +   +      +    E  +   L + 
Sbjct: 230 LPDIRKYAAKGSLVVEASPPTHPELVAKGKLTVINNTVDVNSGTITLQGEFPNTDRLLWP 289

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                 S  L     T     S L   +        ++    T+   +  +         
Sbjct: 290 GQFVNASVVLADTADTILLPSSALVETQDG--SSVFIAKPDNTV-EMRPITVGRKIGPDT 346

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
            + K V          ++       +  G    +              A +
Sbjct: 347 VIEKGVSVGDKVITSGQI------KLFPGVPVKI-VSAQTYKEGPVTPAAV 390


>gi|260897740|ref|ZP_05906236.1| macrolide-specific efflux protein MacA [Vibrio parahaemolyticus
           Peru-466]
 gi|308086203|gb|EFO35898.1| macrolide-specific efflux protein MacA [Vibrio parahaemolyticus
           Peru-466]
          Length = 338

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 81/293 (27%), Gaps = 54/293 (18%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q+   + +           G          +   ++    +   L  +    +A +   
Sbjct: 10  AQVSGQIQRLAVNLGDEIKQGDLIAQIDSLTQQNSLKEAQASLNSLNAQYQAKQAQIKQA 69

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +    K +    A S+ D    E  +     EL +   E +    +++          
Sbjct: 70  NYEYVRQKGMLAAKASSRADYENAEATLAIYKAELAQLDAEIEKAKINVDN--------- 120

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                       +      TI +P+ GT+VY            +
Sbjct: 121 ---------------------------AQLDLGYTTINAPMDGTVVYTAV-EEGQTVNAN 152

Query: 316 QPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP- 372
           Q    I+  +      ++A+++   +  V  G TA   F       + +FK  +  I+P 
Sbjct: 153 QTTPTIIELAKLDTMTVKAEISEADVIFVHPGQTA--LFTILGKPNQ-QFKGTLRAIEPG 209

Query: 373 ------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   S    +     YY  +  +      +    LR G  A+V    + 
Sbjct: 210 PTIMDGDDSDLSISDSDAIYYNAVFDV-----KNPQGILRIGMTAQVSIVLEQ 257



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 45/116 (38%), Gaps = 2/116 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               +V + +  SG I++  V  G +I QG  +   + +   + +   + S+ +L     
Sbjct: 1   AASKLVNVGAQVSGQIQRLAVNLGDEIKQGDLIAQIDSLTQQNSLKEAQASLNSLNAQYQ 60

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            +++ +   N +Y   +    ++     D+     +    ++   ++ +   ++  
Sbjct: 61  AKQAQIKQANYEYVRQKGMLAAKASSRADYENAEATLA--IYKAELAQLDAEIEKA 114


>gi|254425032|ref|ZP_05038750.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
 gi|196192521|gb|EDX87485.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
          Length = 461

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/264 (10%), Positives = 74/264 (28%), Gaps = 17/264 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G  +  G PL   +       ++ ++  ++  +  +  +   L+    +
Sbjct: 86  GGTVTALLVDEGDVVSAGEPLARLD----MRDLEAQRSQLEAQKRQVLAQLQELETGPRR 141

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            DV        + Q    L +  +          +     L  +     +I       ++
Sbjct: 142 EDVASAEAAVSDLQNQLELAELQAQRRADLFAQGAVSAEELDERRFGANAIADRLQQAQS 201

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +   LR    + Q+ ++      ++   ++                    I ++      
Sbjct: 202 QLEELRNG--TRQEQISAQAAQVDQ-IDARIRAIDVSLDKSVLYAPFAGKISQRLVDEGS 258

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +     +      N   E    + +             I   +R    ++S     +  N
Sbjct: 259 VVGGSQQVMKLVENGAMEARIGVPERVAQRLTVGESQAIQVGSRTYSALVSAKLPEVDEN 318

Query: 304 -QSFSSSNYAQQSQPLMKIVPHSK 326
            Q+ +          +++I P S 
Sbjct: 319 SQTVTV---------VLEIAPDSD 333


>gi|183598224|ref|ZP_02959717.1| hypothetical protein PROSTU_01608 [Providencia stuartii ATCC 25827]
 gi|188020393|gb|EDU58433.1| hypothetical protein PROSTU_01608 [Providencia stuartii ATCC 25827]
          Length = 330

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/355 (11%), Positives = 102/355 (28%), Gaps = 88/355 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G+++  G  L   +     + ++  K    + +  +  ++         
Sbjct: 53  GGKLASLNVDEGARVTPGQALGQLDQAPYINALNKAKGVRDSAKAQLAMKEKGY------ 106

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                                         R + I     ++  
Sbjct: 107 ----------------------------------------------RTQEIAQVEAEVAQ 120

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K +  +   S +Q+     K L   + +S N+L+  +                +   L  
Sbjct: 121 KQAAWKYAESFYQRQ----KGLAASHVISANELDNAK--------------TNRNQALAA 162

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +    D+ N   + + +E   ++   +  +    + +   E   +   + +P  GTI+  
Sbjct: 163 LKAAQDKLNQYQSGFRQE---EIAAARGEWLQAEAAVAQAELDLKDTVLTAPSDGTILT- 218

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++    +       +  +   +   ++RA V    +     G    +      D      
Sbjct: 219 RAIEPGSIVGAGNTVFSVT-LTTPVWVRAYVDEPNLGMAVPGREVLLYTDSRPDNPY--- 274

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
              I  + P       S Q   L+T   Y + + ++D      +  LR G P  +
Sbjct: 275 HGTIGFVSPTAEFTPKSVQTPQLRTDLVYRLRIVVSDP-----DEALRQGMPVTI 324


>gi|300853638|ref|YP_003778622.1| putative secretion protein [Clostridium ljungdahlii DSM 13528]
 gi|300433753|gb|ADK13520.1| putative secretion protein [Clostridium ljungdahlii DSM 13528]
          Length = 217

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 54/150 (36%), Gaps = 5/150 (3%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           +NQ     EMS L+  +   +Q  I SPI G I+  Q  +        Q L  ++     
Sbjct: 70  KNQILARQEMSDLS--DSKVDQSLIRSPINGIIIKKQG-TIGEIWSPGQTLATLI-DPNK 125

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
            YI A +   ++  ++ G   ++    Y   +       + +             +  + 
Sbjct: 126 LYITADIEETKLGKIRVGQPVSITIDEYGSQKFTGKVKSVGEAAQSALSIIPTTTSGTFT 185

Query: 388 EVILKIT-DLAFSDNNIELRNGFPAEVLFT 416
           +V+ +I   ++    N ++  G  A V   
Sbjct: 186 KVVQRIPIKISLDKFNNKILPGTNAVVKIR 215


>gi|260870841|ref|YP_003237243.1| putative membrane fusion protein of efflux pump [Escherichia coli
           O111:H- str. 11128]
 gi|257767197|dbj|BAI38692.1| predicted membrane fusion protein of efflux pump [Escherichia coli
           O111:H- str. 11128]
 gi|323175976|gb|EFZ61568.1| multidrug resistance protein mdtN [Escherichia coli 1180]
          Length = 343

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVMPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|254443150|ref|ZP_05056626.1| hypothetical protein VDG1235_1384 [Verrucomicrobiae bacterium
           DG1235]
 gi|198257458|gb|EDY81766.1| hypothetical protein VDG1235_1384 [Verrucomicrobiae bacterium
           DG1235]
          Length = 207

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 66/152 (43%), Gaps = 2/152 (1%)

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           ++ + EK  VS+ D+ +  +++ +          ++ ++L    E   +A  +      E
Sbjct: 5   VEEIVEKVHVSEGDVVEAGQVLAELLSSQERLEVDRLDVLIEKAEADYKATADLVAERIE 64

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               L +          +  I E   +++ I SP++G +V+ +         + +PL ++
Sbjct: 65  SQDKLAEAMTALKSLRIEREIAESQVQERIIRSPVSGIVVF-RLKDPGEAIGRVEPLFEV 123

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           + +S    ++  ++   +  ++ G  ATV+FP
Sbjct: 124 I-NSDQLKLQFFMSAADLPALRVGDEATVQFP 154



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 29/95 (30%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I++K  V  G  +  G  L      +    +D   V I+            +       D
Sbjct: 8   IVEKVHVSEGDVVEAGQVLAELLSSQERLEVDRLDVLIEKAEADYKATADLVAERIESQD 67

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            L +A  + +   ++          ++    +S +
Sbjct: 68  KLAEAMTALKSLRIEREIAESQVQERIIRSPVSGI 102


>gi|194432293|ref|ZP_03064581.1| multidrug resistance protein MdtN [Shigella dysenteriae 1012]
 gi|293407813|ref|ZP_06651653.1| conserved hypothetical protein [Escherichia coli B354]
 gi|194419496|gb|EDX35577.1| multidrug resistance protein MdtN [Shigella dysenteriae 1012]
 gi|284924176|emb|CBG37276.1| multidrug resistance protein [Escherichia coli 042]
 gi|291472064|gb|EFF14546.1| conserved hypothetical protein [Escherichia coli B354]
 gi|332083582|gb|EGI88802.1| multidrug resistance protein mdtN [Shigella boydii 5216-82]
 gi|332084242|gb|EGI89445.1| multidrug resistance protein mdtN [Shigella dysenteriae 155-74]
          Length = 343

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQASDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQASDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|107102934|ref|ZP_01366852.1| hypothetical protein PaerPA_01004003 [Pseudomonas aeruginosa PACS2]
          Length = 314

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/366 (12%), Positives = 99/366 (27%), Gaps = 92/366 (25%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           ++             G ++   V  G ++ QG  L++ +  E              L   
Sbjct: 31  VIVSSKAK-------GRVQVLHVRRGDEVKQGDLLISLDSPE--------------LEAQ 69

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +D                                          +   +     L   L 
Sbjct: 70  LDA----------------------------------------LHAARNQAQAQLDESLH 89

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN--DLNQQERIVYKST 227
             R    +   L+   +   A L + + D    + + E+  +S+   DL+++ER V +  
Sbjct: 90  GTR--EESIRALKASLAQAEAELRNAESDFQRNQQMVERGFLSRTQFDLSRRERDVARDR 147

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           +        + N+   +    +E        ++     + + Q    D            
Sbjct: 148 VA-----EARANLDEGLKGDREERRQALQAAVRRADAQIAELQAQIDDL----------- 191

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGY 346
               + +P+ G +    +           PL+ +V      ++      + I   V+KG 
Sbjct: 192 ---QVRAPVNGEVGPIPA-EQGELINAYSPLLTLVRLDDSYFV--FNLREDILAKVRKGD 245

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNNIEL 405
              ++ P        + +  +  I P+              +++    T          L
Sbjct: 246 RIVMQVPGLGGA---EVETELRYIAPLGDFSTRRATRATGDFDLKTFETRFYPLQPTPGL 302

Query: 406 RNGFPA 411
           R G  A
Sbjct: 303 RPGMSA 308


>gi|311104139|ref|YP_003976992.1| macrolide-specific efflux protein MacA [Achromobacter xylosoxidans
           A8]
 gi|310758828|gb|ADP14277.1| macrolide-specific efflux protein MacA [Achromobacter xylosoxidans
           A8]
          Length = 394

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 70/244 (28%), Gaps = 21/244 (8%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  L +   D+T    L    A  Q    + ER    + L+  E    ++  +   +   
Sbjct: 87  KGQLVAEIDDMTQQNELRNAEAALQTR--RAERAAKVAMLKQAELAFRRQRQMLAADASS 144

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E+       L     ++       A    ++           I+SPI G +V       
Sbjct: 145 RESYESAEATLGVTRAEIASLDAQIAQAEIQVDTARVNLGYTRIVSPIDGMVVAV-VTKE 203

Query: 309 SNYAQQSQPLMKI--VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-FKA 365
                  Q    I  V       I+A+++   +  VK G           D R +   +A
Sbjct: 204 GQTVNSIQSAPTIIKVAQVDTMTIKAQISEADVTRVKPGLPVYFTILGEPDERYRAQLRA 263

Query: 366 IIEKIDPIISQQDNNLQTQE----------YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +    D +         T            YY  +  +      + + +LR    A+V  
Sbjct: 264 VEPAPDSVQKDDATASLTGSASGSSTTAAVYYNGLFDVP-----NPDEKLRISMTAQVFI 318

Query: 416 TAKN 419
               
Sbjct: 319 VLGE 322



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 58/146 (39%), Gaps = 10/146 (6%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +E SV +SG I   + V  + +  +G +K  +V  G ++ +G  +   +D+   + + 
Sbjct: 46  ANLEDSVLASGTIDAIERV-SVGAQATGQLKSLKVALGDRVKKGQLVAEIDDMTQQNELR 104

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + +++  R     + + L          E AF  + + L        S  S     G+
Sbjct: 105 NAEAALQTRRAERAAKVAMLKQA-------ELAFRRQRQMLAADASSRESYESAEATLGV 157

Query: 158 -SSVYRSLKMKLTRMR-SIYLNRLDL 181
             +   SL  ++ +    +   R++L
Sbjct: 158 TRAEIASLDAQIAQAEIQVDTARVNL 183


>gi|167624802|ref|YP_001675096.1| RND family efflux transporter MFP subunit [Shewanella halifaxensis
           HAW-EB4]
 gi|167354824|gb|ABZ77437.1| efflux transporter, RND family, MFP subunit [Shewanella
           halifaxensis HAW-EB4]
          Length = 367

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 66/187 (35%), Gaps = 22/187 (11%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRD--LEQNQRTFADEMSKLTILEKTREQK 290
              + K     +  + D+ N +   Y  +      L+  Q  +    + +  L+   E +
Sbjct: 105 QAAQLKEQEVQLPAVRDDYNRQLRLYKDKSISQQSLQAAQAKYEALQANIESLQANIELR 164

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKKGYTA 348
            I +P  G ++  ++ +   +         IV    L+ +R +  V   QI  +  G   
Sbjct: 165 QIKAPFNG-VLGIRNINLGQFLSAGT---NIVRLEDLSVMRVRFSVPQSQIGKLSVGQPI 220

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           ++    Y D         I  I+P+I+           Y+  L +      +++  LR G
Sbjct: 221 SLTVDPYPDRIY---SGKINAIEPVIN-----------YKTGLVMIQAELPNDDQTLRGG 266

Query: 409 FPAEVLF 415
             AEV  
Sbjct: 267 MFAEVSV 273



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 1/143 (0%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           + ++ + G I     V  I +  +G++     ENG      T L+          +  ++
Sbjct: 55  DQNIKAIGYIEPNQGV-NISNEVAGLVTAINFENGDVAKANTTLVNINSSVQAAQLKEQE 113

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           V +  +R   + +       +     L+ A    E    +      +   +      + V
Sbjct: 114 VQLPAVRDDYNRQLRLYKDKSISQQSLQAAQAKYEALQANIESLQANIELRQIKAPFNGV 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLEN 183
                + L +  S   N + LE+
Sbjct: 174 LGIRNINLGQFLSAGTNIVRLED 196


>gi|88704254|ref|ZP_01101968.1| Secretion protein HlyD [Congregibacter litoralis KT71]
 gi|88701305|gb|EAQ98410.1| Secretion protein HlyD [Congregibacter litoralis KT71]
          Length = 369

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 84/241 (34%), Gaps = 25/241 (10%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSIL----LPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +   A++KR + + +  I+G + W +L     P        G ++       +    +G 
Sbjct: 10  QASTAAIKRTSWIVLALILGSLGWYLLSDRYAPYTSQARVQGYVIG------VAPEVAGT 63

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V+N  ++ +G  L   +  +    +   +  + N +  ++   + +         
Sbjct: 64  ITRVLVKNNQEVEEGDALFEIDTSQYQIALSRAESDLANAKSQVEAGNATVVSARANLTA 123

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFN-YGISSVYRSLKMKLTRMRSIYLN-RLDLENK 184
             KA   R  Q  + L +   +     +   + S   SL     ++ +   + +  +E K
Sbjct: 124 -AKANALRASQDYERLTRLRESDPGTLSVRRLESSKASLDQARAKVVAAESDIQRAIEQK 182

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                +  +           L  ++AV +  L   E  V +++   R  I + +  +   
Sbjct: 183 GGDDESSNAIL---------LSAQSAVEKARL-DLENTVVRASS--RGLITDLRADVGQY 230

Query: 245 N 245
            
Sbjct: 231 A 231



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 70/226 (30%), Gaps = 8/226 (3%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL--DLENKSSLLRALLSSHQKDLTMMKNL 205
           T   V N        +L    T    I L+R   DL N  S + A  ++       +   
Sbjct: 65  TRVLVKNNQEVEEGDALFEIDTSQYQIALSRAESDLANAKSQVEAGNATVVSARANLTAA 124

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
                 +  D  +  R+       L    +   K  L         A  +    +++   
Sbjct: 125 KANALRASQDYERLTRLRESDPGTLSVRRLESSKASLDQARAKVVAAESDIQRAIEQKGG 184

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           D E +        S +       E   + +   G I   ++     YA   +P+M ++  
Sbjct: 185 DDESSNAILLSAQSAVEKARLDLENTVVRASSRGLITDLRAD-VGQYAGTGKPVMTLIAI 243

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
               +I A  T   + H+K G +A + F        + F   +  +
Sbjct: 244 HD-LWINASFTENNLGHMKAGSSAEIVFDALP---GEVFNGTVRNV 285


>gi|262196752|ref|YP_003267961.1| efflux transporter RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
 gi|262080099|gb|ACY16068.1| efflux transporter, RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
          Length = 671

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 67/188 (35%), Gaps = 17/188 (9%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +E++ + +  L  +              L E +R+  +        +  +   E  R   
Sbjct: 232 QEDLQQARRQLGRLQHASPTVKKGSVQAL-EATRERLRLLGVDEATLRAMEAAEHPRRLV 290

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           TI +PI GTI+  +  S  NY     PL   V    + +++       +  ++ G T T+
Sbjct: 291 TIRAPIGGTIIE-RMMSEGNYVTVGTPL-YRVADLSVLWVQLDAYEDDLVLLRPGQTVTL 348

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
                  +  + F   +  IDP++ ++           V + + +   +     LR G  
Sbjct: 349 ETSA---VPGETFTGKVAFIDPVVDKRTRTA------RVRVVVPNREGA-----LRPGMF 394

Query: 411 AEVLFTAK 418
            E    A+
Sbjct: 395 VEAAVQAE 402


>gi|329910800|ref|ZP_08275385.1| Cobalt/zinc/cadmium efflux RND transporter, membrane fusion
           protein, CzcB family [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327546074|gb|EGF31144.1| Cobalt/zinc/cadmium efflux RND transporter, membrane fusion
           protein, CzcB family [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 395

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 63/214 (29%), Gaps = 24/214 (11%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             K  V     +        ++L  ++ +   +  L    +L++E      +YL +    
Sbjct: 117 VRKGQVLAVISSHALADQRSASLAAQQRLALARTTLAREQKLWEEKISAEQDYL-QARNA 175

Query: 266 LEQNQRTFADEMSKLTIL------EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +++          KL  L           +  I SPI GT+   +  ++    +    + 
Sbjct: 176 MQEADIAARSARQKLAALGAASSTSGDLTRYEIRSPIDGTVTDKRI-ANGASLKDDTTIF 234

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IV      +    V  K +  V  G  ATV+   +           +  +  ++  Q  
Sbjct: 235 -IVADLSSVWAEIAVPAKDLNAVSTGQQATVKAIAFDHDAT----GTLSYVGALVGAQTR 289

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                           +   +     R G P  V
Sbjct: 290 TAS-----------ARIVLPNPKGVWRPGLPVTV 312



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 39/116 (33%), Gaps = 5/116 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +    I   +  +GEI    + +  I     GI++      G ++ +G  L         
Sbjct: 73  AGPARINSMLQLTGEIHANGDRMVHIVPRLGGIVESVSANAGDRVRKGQVLAVISSHALA 132

Query: 94  DLIDLKKVSIKNL---RCHIDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGKY 145
           D       + + L   R  +  E+   +  ++ + D L+     +E  +     + 
Sbjct: 133 DQRSASLAAQQRLALARTTLAREQKLWEEKISAEQDYLQARNAMQEADIAARSARQ 188


>gi|284007906|emb|CBA73851.1| macrolide-specific efflux protein [Arsenophonus nasoniae]
          Length = 352

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 70/196 (35%), Gaps = 14/196 (7%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE  V ++G++     V ++ +  SG ++   V+ G  + +G  L   +     +++ 
Sbjct: 32  GNIEKHVLATGKLDAVSKV-DVGAQVSGQLQTLYVKEGDMVKKGDLLAVIDPQNAQNVVK 90

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYD-----VLEKAFESREEQLLDFLGKYHSTCSKV 152
             + +++  + ++   ++ L      Y         +A   +E   +           K+
Sbjct: 91  ESEETLRERQANLALARAELKLAEMTYQRHVDLAKHQAISRQEFDRVKTDVAVKKARVKI 150

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLN--RLDLENKSSLLRALLSSHQKDLTMMKNLFE--- 207
           +   I+    SL    T ++  +L      +      L+       ++   +  L +   
Sbjct: 151 YIAQINRNQASLNTAKTNLKYTHLTAPMSGIVTNIKTLQGQTVIAAQEAPTIMTLADLDT 210

Query: 208 ---KNAVSQNDLNQQE 220
              K  VS+ D+   +
Sbjct: 211 MLVKAQVSEADIINLK 226



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 88/258 (34%), Gaps = 28/258 (10%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-------KNAVSQNDLNQQERIVYKST 227
            ++++D+  + S     L   + D+    +L         +N V +++   +ER    + 
Sbjct: 46  AVSKVDVGAQVSGQLQTLYVKEGDMVKKGDLLAVIDPQNAQNVVKESEETLRERQANLAL 105

Query: 228 LELRENIHEQKNMLRHINELYDEA--NLEFANYLKEISRDLEQNQ---RTFADEMSKLTI 282
                 + E     RH++    +A    EF     +++    + +          + L  
Sbjct: 106 ARAELKLAEMT-YQRHVDLAKHQAISRQEFDRVKTDVAVKKARVKIYIAQINRNQASLNT 164

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQ 340
            +   +   + +P++G +   ++          +   +M +        ++A+V+   I 
Sbjct: 165 AKTNLKYTHLTAPMSGIVTNIKTLQGQTVIAAQEAPTIMTLA-DLDTMLVKAQVSEADII 223

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
           ++K G  A       +           + I   I      +    +Y    ++ +   S 
Sbjct: 224 NLKPGQKA-------SFTILGAPDTTFDGILKDILPTPEEVNNAIFYHARFEVPN---SQ 273

Query: 401 NNIELRNGFPAEVLFTAK 418
           + ++L+    A++    +
Sbjct: 274 HILKLQ--MTAQIKIQLE 289


>gi|289578231|ref|YP_003476858.1| efflux transporter RND family, MFP subunit [Thermoanaerobacter
           italicus Ab9]
 gi|289527944|gb|ADD02296.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           italicus Ab9]
          Length = 393

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 85/254 (33%), Gaps = 32/254 (12%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           + +     DL  +  + +  L   Q  L  +K L EK +       Q         L   
Sbjct: 90  KLLEFETQDLYIQYQIAQKQLEIAQMQLDALKKLKEKQSQQSQVAAQLPNTSLPQQLPSG 149

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E+  +Q ++          + ++  +   +    L+Q Q   A+   K       ++QK 
Sbjct: 150 ESTVQQPSI----------SQMQTTSLSLDDQIKLQQKQVEIAELNLKSIKQSMDKQQKY 199

Query: 292 ILSPIAGTI-----VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           I +   GT+       N  F+SS +   +      V       I   V P    ++K+G 
Sbjct: 200 ITAEFDGTVTVVNAKNNSYFTSSQF--PAIT----VEDLNNLQITLDVNPYDAVNLKEGQ 253

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            A + F        K F+ ++ K+ P  ++           +V +         N+  ++
Sbjct: 254 KAYIHFAD------KTFEGVVSKVSPTATKVITQTGGDNVVKVYVD-----LLSNDGTIK 302

Query: 407 NGFPAEVLFTAKNT 420
            GF  +V       
Sbjct: 303 PGFNVDVDIKIAEK 316



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 51/148 (34%), Gaps = 6/148 (4%)

Query: 51  LNEDNVVE---IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           + E    +   I SP    + K  V  G  + +G  LL FE  +      + +  ++  +
Sbjct: 57  VVESKSKQEYYILSPT--KVSKVYVSVGDNVKRGDKLLEFETQDLYIQYQIAQKQLEIAQ 114

Query: 108 CHIDTEKSALDFLNNKYDVLEKA-FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +D  K   +  + +  V  +    S  +QL                    S+   +K+
Sbjct: 115 MQLDALKKLKEKQSQQSQVAAQLPNTSLPQQLPSGESTVQQPSISQMQTTSLSLDDQIKL 174

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +  ++    LN   ++      +  +++
Sbjct: 175 QQKQVEIAELNLKSIKQSMDKQQKYITA 202


>gi|170720355|ref|YP_001748043.1| secretion protein HlyD family protein [Pseudomonas putida W619]
 gi|169758358|gb|ACA71674.1| secretion protein HlyD family protein [Pseudomonas putida W619]
          Length = 288

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 69/218 (31%), Gaps = 44/218 (20%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             L+ +ER   + T      I  +      IN                        +   
Sbjct: 95  QQLHLREREAARRTALGPGAISAELRENAQINAAI--------------------ARGEL 134

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +  ++L + +    +  + +P +G I   +  +  NY    Q +M +V      +I+A 
Sbjct: 135 HEAQAQLQVAKINLARSEVRAPRSGHITNLRL-AQGNYVNAGQSVMALV-DDSTFFIQAY 192

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--------- 384
               ++  ++ G +  V          +  +  +E I   I+  ++N  +Q         
Sbjct: 193 FEETKLPRIRVGDSVKVWL----MGAGEAMQGHVESISRGITDSNSNPDSQLLPEVEPTF 248

Query: 385 ------EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 +   V +++ D+      + L  G  A V   
Sbjct: 249 NWVRLAQRIPVRIRLDDI---PEGMNLSAGMTASVQVH 283



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 50/143 (34%), Gaps = 6/143 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK--VSIKNLRCH 109
              +VV I    SG +++ +V++  ++  G  L++ +        D        +  + H
Sbjct: 39  VRADVVVIAPDVSGWVRELKVQDNQRVKAGDLLMSIDRERFQAAFDQATAVAETRTQQLH 98

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV----FNYGISSVYRSLK 165
           +   ++A         +  +  E+ +       G+ H   +++     N   S V     
Sbjct: 99  LREREAARRTALGPGAISAELRENAQINAAIARGELHEAQAQLQVAKINLARSEVRAPRS 158

Query: 166 MKLTRMRSIYLNRLDLENKSSLL 188
             +T +R    N ++       L
Sbjct: 159 GHITNLRLAQGNYVNAGQSVMAL 181


>gi|327543165|gb|EGF29600.1| membrane protein containing Peptidase M50 domain [Rhodopirellula
           baltica WH47]
          Length = 783

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 58/163 (35%), Gaps = 9/163 (5%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS-GI 66
            + R +    +     +++ ++     +  +P+   V ++  IL E          S GI
Sbjct: 420 PMNRRNIRPRRAFAWCTLLAMVVF---AGTVPLPRHVYNTVRILPEQETRV--HLTSPGI 474

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL---NNK 123
           + +  V+ G  + +G  L    + E    +   +  ++     ++  +++   +   +++
Sbjct: 475 LSQIHVDPGQTVRRGDVLAELSNPEIELEVLEAEGDVRQQTMRLEGLRASRTLVPEASSQ 534

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
               E   +   ++L     +  S        G+  + +S   
Sbjct: 535 LPAAEALLDEMRDRLAAANRRRDSLTITAPCDGVVMIAQSYPQ 577



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 6/96 (6%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V + D+   E    +  LE+ E   + +     +  L     L     + E S  L   +
Sbjct: 486 VRRGDVLA-ELSNPEIELEVLEAEGDVRQQTMRLEGLRASRTL-----VPEASSQLPAAE 539

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
               +   +L    + R+  TI +P  G ++  QS+
Sbjct: 540 ALLDEMRDRLAAANRRRDSLTITAPCDGVVMIAQSY 575


>gi|256221751|ref|NP_001157776.1| plectin isoform 1b [Rattus norvegicus]
          Length = 4544

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1340 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1399

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1452

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1453 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1511

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1512 AELALRVKAEAEAAREKQR 1530



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2180 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2233

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2234 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2293

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2294 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2350

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2351 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2399



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2317 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2376

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2377 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2434

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2435 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2494

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2495 EKDSLLQRERFIEQ 2508



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1637 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1696

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1697 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1746

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1747 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1805

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1806 LAEEAKRQRQLAEED 1820



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2229 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2288

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2289 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2348

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2349 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2408

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2409 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2439



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1338 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1397

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1398 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1457

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1458 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1517

Query: 291  T 291
             
Sbjct: 1518 V 1518



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1548 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1607

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1608 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1667

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1668 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1727

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1728 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1771



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1833 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1892

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1893 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1952

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1953 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2012

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2013 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2050



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1453 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1506

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1507 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1564

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1565 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1622

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1623 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1654


>gi|256221662|ref|NP_001157769.1| plectin isoform 1f [Rattus norvegicus]
          Length = 4535

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1331 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1390

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1391 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1443

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1444 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1502

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1503 AELALRVKAEAEAAREKQR 1521



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2171 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2224

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2225 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2284

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2285 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2341

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2342 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2390



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2308 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2367

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2368 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2425

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2426 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2485

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2486 EKDSLLQRERFIEQ 2499



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1628 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1687

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1688 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1737

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1738 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1796

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1797 LAEEAKRQRQLAEED 1811



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2220 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2279

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2280 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2339

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2340 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2399

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2400 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2430



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1329 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1388

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1389 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1448

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1449 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1508

Query: 291  T 291
             
Sbjct: 1509 V 1509



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1539 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1598

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1599 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1658

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1659 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1718

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1719 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1762



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1824 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1883

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1884 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1943

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1944 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2003

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2004 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2041



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1444 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1497

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1498 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1555

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1556 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1613

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1614 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1645


>gi|40849900|gb|AAR95662.1| plectin 8 [Rattus norvegicus]
          Length = 4545

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1341 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1400

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1401 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1453

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1454 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1512

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1513 AELALRVKAEAEAAREKQR 1531



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2181 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2234

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2235 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2294

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2295 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2351

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2352 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2400



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2318 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2377

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2378 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2435

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2436 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2495

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2496 EKDSLLQRERFIEQ 2509



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1638 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1697

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1698 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1747

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1748 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1806

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1807 LAEEAKRQRQLAEED 1821



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2230 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2289

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2290 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2349

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2350 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2409

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2410 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2440



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1339 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1398

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1399 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1458

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1459 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1518

Query: 291  T 291
             
Sbjct: 1519 V 1519



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1549 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1608

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1609 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1668

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1669 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1728

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1729 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1772



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1834 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1893

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1894 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1953

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1954 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2013

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2014 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2051



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1454 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1507

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1508 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1565

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1566 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1623

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1624 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1655


>gi|167572548|ref|ZP_02365422.1| hypothetical protein BoklC_22111 [Burkholderia oklahomensis C6786]
          Length = 502

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 85/270 (31%), Gaps = 10/270 (3%)

Query: 27  GIIGLITWSILLPI--EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           G++  + W +L  +   I   SS   + +  V  + SP  GI+ +  V  G       PL
Sbjct: 51  GVVFFVIWMVLTMMFPNIFTRSSERAVVDSQVTLVTSPVEGIVTEQHVAIGKSFEANQPL 110

Query: 85  LTFE--DIETTDLIDLKKVSIKNLR----CHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
           +T +  +I+   LIDL   ++ N +       +           ++D+      S+ E  
Sbjct: 111 MTVQNPNIDRALLIDLTGKALDNQQRYDAARAELAGDESQLAATQHDLQRYQAASQREHA 170

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            D                +      +        +  ++          L  L ++    
Sbjct: 171 ADIHA--LQARLAAAKAQVDQQEDVVNRNQAMQWAGAVSEAYTNASRYQLSILSNAKAAA 228

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +++       S++ +         ++L  R  +     + R       EA  +  N 
Sbjct: 229 AAELEHAITNGDASRSKVYASATDGPVASLAQRSRLLSADIVQRKAEMTQFEAYGQSVNK 288

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           L +  ++  +         S+  I+E    
Sbjct: 289 LIDAEKERLERLTNLEIRSSEPGIVEDVLA 318


>gi|40849888|gb|AAR95656.1| plectin 2 [Rattus norvegicus]
          Length = 4536

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1332 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1391

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1392 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1444

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1445 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1503

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1504 AELALRVKAEAEAAREKQR 1522



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2172 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2225

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2226 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2285

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2286 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2342

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2343 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2391



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2309 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2368

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2369 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2426

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2427 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2486

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2487 EKDSLLQRERFIEQ 2500



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1629 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1688

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1689 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1738

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1739 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1797

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1798 LAEEAKRQRQLAEED 1812



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2221 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2280

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2281 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2340

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2341 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2400

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2401 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2431



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1330 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1389

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1390 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1449

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1450 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1509

Query: 291  T 291
             
Sbjct: 1510 V 1510



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1540 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1599

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1600 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1659

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1660 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1719

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1720 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1763



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1825 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1884

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1885 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1944

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1945 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2004

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2005 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2042



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1445 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1498

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1499 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1556

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1557 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1614

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1615 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1646


>gi|59714286|ref|YP_207061.1| multidrug resistance protein A [Vibrio fischeri ES114]
 gi|59482534|gb|AAW88173.1| multidrug resistance protein A [Vibrio fischeri ES114]
          Length = 336

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 104/309 (33%), Gaps = 30/309 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +  +  +      + E  + Q ++          + +   +     + ++ + + + 
Sbjct: 43  RAKIVSIAPQIKGRIISVEVNDYQKVNKGDLLLKIDPQPYLLAVKRAESAYQLAVQQHQV 102

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                       + + + L   Q +    + L  +   SQ +L+  +  +  +  +L E 
Sbjct: 103 ADSKVTQAIANLNGVTSNLKETQIEFKRTQALVSRKLSSQQELDIIKNKLAIAQAKLEEA 162

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +  + +      + N   A  +++ S +L Q               E       I 
Sbjct: 163 RANVEAAIAN----RGDDNGVDAAIVQQASAELAQ--------------AELDLSYTDIT 204

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +     F   +  + SQ L  +V      ++RA      + +++ G TA V   
Sbjct: 205 APTDGLLGEINVF-VGSVVKNSQMLFPLV-VKNTYWVRANFKETSLTNIRMGQTAEVVID 262

Query: 354 HYADIREK-------KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            Y DI  +               + P  +   N ++ ++ Y V L +       ++ +LR
Sbjct: 263 MYPDITWQAKVSELSPASGTSFSLMPPENATGNWVKIKQRYPVKLILD---IPKDSPQLR 319

Query: 407 NGFPAEVLF 415
            G  AEV  
Sbjct: 320 IGASAEVTI 328


>gi|146310944|ref|YP_001176018.1| hypothetical protein Ent638_1286 [Enterobacter sp. 638]
 gi|182705267|sp|A4W8D7|Y1286_ENT38 RecName: Full=UPF0194 membrane protein Ent638_1286; Flags:
           Precursor
 gi|145317820|gb|ABP59967.1| secretion protein HlyD family protein [Enterobacter sp. 638]
          Length = 331

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/356 (12%), Positives = 105/356 (29%), Gaps = 90/356 (25%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G ++   V+ G  +  G  L   +                     +   K+++     +
Sbjct: 51  GGRLESLAVDEGDTVKSGQLLGQLDK--------------APYENALMQAKASVSVAQAQ 96

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           YD++                                        L   R   + + +   
Sbjct: 97  YDLM----------------------------------------LAGYRDEEVAQAEAAV 116

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K +  +A     Q      + L++   +S NDL                     ++    
Sbjct: 117 KQA--KAAYDYSQNFYNRQQGLWKSRTISANDL------------------ENARSSRDQ 156

Query: 244 INELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                  A  + + Y      +D+ Q +       ++L   E      T+++P  GT++ 
Sbjct: 157 AQATLKSAQDKLSQYRTGNRPQDIAQAKANLEQAQAQLAQAELDLHDTTLIAPSNGTLMT 216

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++    +       ++ +   ++  ++RA +    +   + G    +   +     +K 
Sbjct: 217 -RAVEPGSMLSAGSTVLTLS-LTRPVWVRAYIDEPNLSQAQPGREILL---YTDGRPDKP 271

Query: 363 FKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +   I  + P       + +  +L+T   Y + + +TD   +     LR G P  V
Sbjct: 272 YHGKIGFVSPTAEFTPKTVETPDLRTDLVYRLRIIVTDADDA-----LRQGMPITV 322


>gi|326797472|ref|YP_004315291.1| efflux transporter RND family, MFP subunit [Sphingobacterium sp.
           21]
 gi|326548236|gb|ADZ76621.1| efflux transporter, RND family, MFP subunit [Sphingobacterium sp.
           21]
          Length = 352

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI---- 96
           E  ++ SG +   + V  I+S  SGII+      GS + +G  L   +D E    +    
Sbjct: 55  ENILTVSGSVEPNEQVQ-IRSEVSGIIRNLYFHEGSFVTKGQILFNIDDTELQAQLLQRQ 113

Query: 97  -DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            + K       R  +  EK A+        + +      + QL+   
Sbjct: 114 TEEKLAEENARRASLLLEKEAISTQEKDVALADLQSAQAQTQLIKAQ 160



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 15/171 (8%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQ----NQRTFADEMSKLTILEKTREQKT 291
           + + + R   E   E N   A+ L E      Q             ++  +++    +  
Sbjct: 106 QAQLLQRQTEEKLAEENARRASLLLEKEAISTQEKDVALADLQSAQAQTQLIKAQIAKTK 165

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P +G I   +S S+  Y   +  +  ++  +    I   V  K    +K+G      
Sbjct: 166 VRAPFSGKI-GLRSVSAGEYLTPTTIVANLM-STNPVKILFSVPEKYTAQIKEGLPLNFT 223

Query: 352 FPH----YADIREKKFKAI-----IEKIDPIISQQDNNLQTQEYYEVILKI 393
                  Y+         I       +I  + +     L    +  V L I
Sbjct: 224 ISGSSKQYSAKIYAIEPGIDAQTRTIQIRALAANDSGELFPGSFARVQLPI 274


>gi|325105153|ref|YP_004274807.1| efflux transporter, RND family, MFP subunit [Pedobacter saltans DSM
           12145]
 gi|324974001|gb|ADY52985.1| efflux transporter, RND family, MFP subunit [Pedobacter saltans DSM
           12145]
          Length = 437

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/246 (10%), Positives = 67/246 (27%), Gaps = 43/246 (17%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +     A   + +      + L++   +S ++ +  +     +   L           
Sbjct: 119 QQQIVQAEANFKNVEARFKRNQTLYKDKVISASEFDAAQAEYLTAKANLES--------- 169

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                                 + L   +       + +        +  I +P+ G + 
Sbjct: 170 --------------------AKQGLVGAKFNLEQSGAAVKEASDNLARTNIYAPVDGVVS 209

Query: 302 YNQSFSSSNYAQQSQ----PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
                        +Q     +M I        +  +V    I  +  G T+ +    +  
Sbjct: 210 KLSVEKGERVVGTAQMSGTEIMTIA-DLSSMEVNVEVNENDINRLSLGDTSIIEVDAF-- 266

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN------NIELRNGFPA 411
              +KFK ++ +I    +    ++     + V +KI   ++ D           R G  A
Sbjct: 267 -MGRKFKGVVTEIASSANIVGESVDQVTNFAVKVKILPESYMDVAQKNKLPSPFRPGLSA 325

Query: 412 EVLFTA 417
            V    
Sbjct: 326 TVDIQT 331



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 82/234 (35%), Gaps = 21/234 (8%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWS-----ILLPIE-----ISVSSSGEILNED 54
           M K LKR        + LL I    G I  S      +  +E      +VS+SG+I  E 
Sbjct: 1   MSKKLKRILIIGGVLVVLLIIATKAGWIGKSKAIKVAVSKVETKDIIETVSASGKIQPEV 60

Query: 55  NVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            V    SP  SG I +  V  G  + +G  L   +        D    S    +  + + 
Sbjct: 61  QVKL--SPEVSGEIVELNVREGDIVKKGQLLCKIKPDILVSGYDRSVASYNAQKAAVGSA 118

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +  +      +  +E  F+  +    D +       +  F+   +    +     +  + 
Sbjct: 119 QQQIVQAEANFKNVEARFKRNQTLYKDKV-----ISASEFDAAQAEYLTAKANLESAKQG 173

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           +   + +LE   + ++    +  +   +   +     VS+  + + ER+V  + 
Sbjct: 174 LVGAKFNLEQSGAAVKEASDNLART-NIYAPV--DGVVSKLSVEKGERVVGTAQ 224


>gi|262171420|ref|ZP_06039098.1| membrane-fusion protein [Vibrio mimicus MB-451]
 gi|261892496|gb|EEY38482.1| membrane-fusion protein [Vibrio mimicus MB-451]
          Length = 335

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 71/190 (37%), Gaps = 12/190 (6%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    + G+I+   + V IKS  +GI+ +  V  G  + QG PL+      T   +    
Sbjct: 2   EKQAVAVGQIMPS-HAVAIKSQINGIVGEIYVREGQLVEQGQPLIKVRPNPTPQALTDAS 60

Query: 101 VSIKNLRCHIDTEKSALDFL----------NNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             +     +++++   L  L           N  D +    E + ++      + +    
Sbjct: 61  TELMQSEANLESDLQRLANLEHLVKQKIIPENYDDYVRAKAEVKAKKAEVQQKRQNLELI 120

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +     I     S  +      +I   ++++ E   S   +  ++    L  MKN+  K 
Sbjct: 121 RSGEASIGQAKLSSTLYAPISGTILNIKVEVGEPIISTESSQAATEMMQLADMKNIVFKG 180

Query: 210 AVSQNDLNQQ 219
           +VS++D  Q 
Sbjct: 181 SVSEHDAAQL 190



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 101/262 (38%), Gaps = 34/262 (12%)

Query: 183 NKSSLLRALLSSHQKDLTMMK-NLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           + +  +++ ++    ++ + +  L E+   + +   N   + +  ++ EL ++    ++ 
Sbjct: 14  SHAVAIKSQINGIVGEIYVREGQLVEQGQPLIKVRPNPTPQALTDASTELMQSEANLESD 73

Query: 241 LRHINELYDEANLEFA-----------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+ +  L      +               +K    +++Q ++      S    + + +  
Sbjct: 74  LQRLANLEHLVKQKIIPENYDDYVRAKAEVKAKKAEVQQKRQNLELIRSGEASIGQAKLS 133

Query: 290 KTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            T+ +PI+GTI+  +              Q +  +M++    K    +  V+      + 
Sbjct: 134 STLYAPISGTILNIKV-EVGEPIISTESSQAATEMMQLA-DMKNIVFKGSVSEHDAAQLI 191

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL---QTQEY---YEVILKITDLA 397
            G  A +    Y    E+  +  + K+  I S++ NN    + + +   +EV +    + 
Sbjct: 192 SGMPAIITVAPYP---EQAIEGQLTKV-AIQSERLNNPENKEGKSFDNGFEVEIGQLQI- 246

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
              ++I LR+GF A    T + 
Sbjct: 247 --PDSITLRSGFSASAQITLQR 266


>gi|126700021|ref|YP_001088918.1| putative lipoprotein [Clostridium difficile 630]
 gi|255101563|ref|ZP_05330540.1| putative lipoprotein [Clostridium difficile QCD-63q42]
 gi|255307432|ref|ZP_05351603.1| putative lipoprotein [Clostridium difficile ATCC 43255]
 gi|115251458|emb|CAJ69291.1| putative lipoprotein [Clostridium difficile]
          Length = 407

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 112/356 (31%), Gaps = 94/356 (26%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V+ G  + +G  LL+    E        + S+K  +  +D  K++        
Sbjct: 67  GTVQEVYVKLGQNVRKGDELLSISSPE-------LENSVKQSKASLDLAKASYSSATGG- 118

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                 SL+ ++ + ++   N       
Sbjct: 119 --------------------------------------SLEAQVNQAKTALDN------- 133

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +      Q++    K L+E+  +S +   + E            ++ + K  L   
Sbjct: 134 ---AKIQYEESQRNYDNNKILYEQEVISLDQFKKIEF-----------SLEQTKQQLDSA 179

Query: 245 NELYDEANLE-FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              YD A  +          + L+Q Q +         +     ++ T+ SP+ GTI   
Sbjct: 180 QRAYDTATSKSIPQAKALAKKQLDQAQVS-------YNLAMSNLDKLTLTSPVDGTITA- 231

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++F S     QSQP   I+ +  +  +   V    I   KK     V           K 
Sbjct: 232 KNFDSKEMITQSQP-AFIISNPNILEVDLNVAESDIGKFKKDGNVDVIIE--DQRILGKI 288

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +   +DP  S           Y V + +     ++ N + + G  A+V  + + 
Sbjct: 289 DYVPSVVDPQTSL----------YPVKVLV-----NNTNNKFKAGMSAQVNLSVEK 329


>gi|296101102|ref|YP_003611248.1| secretion protein HlyD family protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295055561|gb|ADF60299.1| secretion protein HlyD family protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 354

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 56/169 (33%), Gaps = 11/169 (6%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL  +  +    W  L P    +     +      V      SG +    V N SQ+ +G
Sbjct: 19  LLMFVYFVVADIWIPLTPDSTVMR---VVTPVSPRV------SGYVSAVHVHNNSQVTRG 69

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L   +D    + ++  +++++     +  E+        +  +      +R +++   
Sbjct: 70  DLLFELDDTPFRNKVEAAQIALEQ--ARLSNEQLDAQIAAAQASLKTAVLTARNDKVTFD 127

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             +  ST   V    +  V  + +     + SI  N  +L  +      
Sbjct: 128 RYQKLSTLQNVSQADLDKVRTTWQSSEQSVSSIQANIHNLRIQRGEREE 176


>gi|288936711|ref|YP_003440770.1| secretion protein HlyD [Klebsiella variicola At-22]
 gi|288891420|gb|ADC59738.1| secretion protein HlyD family protein [Klebsiella variicola At-22]
          Length = 380

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 86/296 (29%), Gaps = 48/296 (16%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           ++   +  Q+L       +     F   +  +   +K       S+       + + S  
Sbjct: 75  QSVPVKPNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSLNAALSQAQAELSRA 134

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A     +++    +    + A S   ++ + +        +                  
Sbjct: 135 VAQRDQSRREYARFREGHAQGAFSDQMVDTRLQTWKADEASVSA---------------- 178

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A  +       +   ++    T A  +++L   +   +   + +P  G +      + 
Sbjct: 179 --AQAKVVQARNTLESVVKGKNTTVASLLAQLQKAQFQLDNTVVRAPEDGYV-----STV 231

Query: 309 SNYAQQSQ--------PLMKIVPHSKLTYIR--AKVTPKQIQHVKKGYTATVRFPHYADI 358
               +           PLM  VP          A      +Q + KG  A + FP     
Sbjct: 232 G--LRPGTMSTALGMIPLMTFVPVEGAASREYVAAFRQNALQRLHKGEPAELMFPAIPGT 289

Query: 359 REKKFKAIIEKIDPIISQ----------QDNNLQTQEYYEVILKITDLAFSDNNIE 404
               F+  +  + P I +            + L T     V+LK+TD  F++  + 
Sbjct: 290 ---VFRGEVADVLPAIGESQFQGQGKLLTTDALNTHGRALVVLKVTDPRFAEYALP 342



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 51/173 (29%), Gaps = 10/173 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LR 107
             V I S   G ++   V+    + +G  L T +       +D  +  IK        L 
Sbjct: 62  RTVPIVSQVRGRVQSVPVKPNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSLN 121

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
             +   ++ L     + D   + +    E      F  +   T  + +    +SV  +  
Sbjct: 122 AALSQAQAELSRAVAQRDQSRREYARFREGHAQGAFSDQMVDTRLQTWKADEASVSAAQA 181

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLN 217
             +    ++           + L A L   Q  L        E   VS   L 
Sbjct: 182 KVVQARNTLESVVKGKNTTVASLLAQLQKAQFQLDNTVVRAPEDGYVSTVGLR 234


>gi|256221767|ref|NP_001157780.1| plectin isoform 1a [Rattus norvegicus]
          Length = 4544

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1340 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1399

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1400 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1452

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1453 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1511

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1512 AELALRVKAEAEAAREKQR 1530



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2180 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2233

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2234 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2293

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2294 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2350

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2351 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2399



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2317 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2376

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2377 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2434

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2435 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2494

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2495 EKDSLLQRERFIEQ 2508



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1637 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1696

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1697 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1746

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1747 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1805

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1806 LAEEAKRQRQLAEED 1820



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2229 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2288

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2289 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2348

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2349 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2408

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2409 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2439



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1338 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1397

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1398 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1457

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1458 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1517

Query: 291  T 291
             
Sbjct: 1518 V 1518



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1548 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1607

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1608 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1667

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1668 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1727

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1728 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1771



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1833 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1892

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1893 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1952

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1953 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2012

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2013 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2050



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1453 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1506

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1507 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1564

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1565 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1622

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1623 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1654


>gi|256822645|ref|YP_003146608.1| RND family efflux transporter MFP subunit [Kangiella koreensis DSM
           16069]
 gi|256796184|gb|ACV26840.1| efflux transporter, RND family, MFP subunit [Kangiella koreensis
           DSM 16069]
          Length = 400

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 97/259 (37%), Gaps = 32/259 (12%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           RS K  +  + +        + K   ++  LS  + DL    +L++  A+S+ + +  ++
Sbjct: 100 RSEKQAVAELHAAQSALEMTQAKLRQVQNELSFAKSDLERADSLYKDQAISEREYDTAKK 159

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
           I      EL+                  +A L+      E  + L     + ++ + K  
Sbjct: 160 IYQSLQQELQAT----------------QATLQLRRAELERVQALLDT--SLSEFLPKCE 201

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
             +       +LSP  G ++  +   S+     +QP+M  V       I+ ++   +   
Sbjct: 202 CSQ-------VLSPADGVVLT-RYRESAGVINAAQPIMD-VGDPTNLDIKVELISTEAVR 252

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           V KG    ++        +   +  + +++P+  ++   L  +E   V + I   +  + 
Sbjct: 253 VVKGQKVRMK----GWGGDTVLEGFVRQVEPMAYKKVTALGIEE-QRVNVYIDFTSPQEQ 307

Query: 402 NIELRNGFPAEVLFTAKNT 420
            ++L +G+  +V     + 
Sbjct: 308 WLKLGHGYQLDVDIILADK 326



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 82/231 (35%), Gaps = 15/231 (6%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEI------LNEDNVV---EI 59
           +  N    L  + +  ++ ++    W   + +E    + G+       + E  V    ++
Sbjct: 1   MGINKRFKLWIVLVAILVALLAYGFWPRAIEVEAVTVTKGQFYEVVSEVGETRVKNIYQV 60

Query: 60  KSPFSGIIKKFQVENGSQILQG-TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
            +P +G +++ ++E G  +    T +   E + +  L    +   K     +   +SAL+
Sbjct: 61  SAPITGYLRRVELEVGDPVEANTTVVAEIEPLRSQPLDPRSE---KQAVAELHAAQSALE 117

Query: 119 FLNNKYDVL--EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
               K   +  E +F   + +  D L K  +   + ++          +       ++ L
Sbjct: 118 MTQAKLRQVQNELSFAKSDLERADSLYKDQAISEREYDTAKKIYQSLQQELQATQATLQL 177

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
            R +LE   +LL   LS         + L   + V      +   ++  + 
Sbjct: 178 RRAELERVQALLDTSLSEFLPKCECSQVLSPADGVVLTRYRESAGVINAAQ 228


>gi|91789095|ref|YP_550047.1| secretion protein HlyD [Polaromonas sp. JS666]
 gi|91698320|gb|ABE45149.1| secretion protein HlyD [Polaromonas sp. JS666]
          Length = 465

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 88/272 (32%), Gaps = 22/272 (8%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           R ++       ++       +   +  R+ ++    DL   ++L    AVS+ +LN  + 
Sbjct: 119 RQVRTLYANNGTLAAQIALRDADVARARSDIARATDDLNRRQSLTGNGAVSKEELNHAQT 178

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +  +   L             +                       +   +     +K+ 
Sbjct: 179 QLANAKSALAAAQAGVVAAREQLTSNQALTEGTSI-----------EQHPSVQVAAAKVR 227

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  + +P+ G +   ++           P+M I+P +   ++ A     Q+++
Sbjct: 228 EAYLATQRAGLQAPVDGYVAK-RTVQLGQRVAAGTPMMSIIPLN-QVWVDANFKEVQLRN 285

Query: 342 VKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           ++ G   T+    Y    +                 + P  +   N ++  +   V + +
Sbjct: 286 IRIGQPVTLVADLYGKKIQYKGTVAGLGVGTGAAFSLLPAQNATGNWIKVVQRVPVRIAL 345

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN-TTLAQ 424
                +DN + +     AEV  + K+  TLA 
Sbjct: 346 DARQLADNPLRVGLSMDAEVDVSHKDGKTLAD 377



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 62/185 (33%), Gaps = 3/185 (1%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPI-EISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +P   K +T L+ + ++  + W+    +      S+     + NV++I     G +    
Sbjct: 23  NPRRKKALTALASVVVVAGLGWAAYEYLVASHYESTDNAYVQGNVIQITPQIGGTVMAIM 82

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            ++   +  G  L+  +  +    ++  + ++      + T  +    L  +  + +   
Sbjct: 83  ADDTDFVKAGQTLVQLDPADARIALEQAEAALAQAVRQVRTLYANNGTLAAQIALRDADV 142

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                 +       +   S   N  +S     L    T++ +        +      R  
Sbjct: 143 ARARSDIARATDDLNRRQSLTGNGAVS--KEELNHAQTQLANAKSALAAAQAGVVAAREQ 200

Query: 192 LSSHQ 196
           L+S+Q
Sbjct: 201 LTSNQ 205


>gi|332752007|gb|EGJ82400.1| multidrug resistance protein mdtN [Shigella flexneri 4343-70]
          Length = 323

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 41  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 100

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 101 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 160

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G I+ 
Sbjct: 161 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMTTVRAPFDGRIIS 201

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 202 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 256

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 257 FEGKVDSIGYGVLPDDGGL 275



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 42/136 (30%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 24  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 83

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 84  LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 143

Query: 172 RSIYLNRLDLENKSSL 187
               LN + L+ +S+ 
Sbjct: 144 AEADLNAVLLQAQSAA 159


>gi|320179081|gb|EFW54040.1| Inner membrane component of tripartite multidrug resistance system
           [Shigella boydii ATCC 9905]
          Length = 290

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 89/259 (34%), Gaps = 27/259 (10%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 11  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 70

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 71  ATVEKARAAAKQASDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 130

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ L  +                       A   + + + +   E  T+ +P  G ++ 
Sbjct: 131 GVDALVAQR----------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 168

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 169 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 223

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 224 FEGKVDSIGYGVLPDDGGL 242



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 5/145 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I +  V +   + QG  L   +       +   + S+  L   I   + ++D     
Sbjct: 6   SGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFG 65

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D +    E               T   +    +S+          R     LN + L+ 
Sbjct: 66  ADSVNATVEKARAAAKQASDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQA 125

Query: 184 KSS-----LLRALLSSHQKDLTMMK 203
           +S+      L A  ++ + D+ + K
Sbjct: 126 QSAASGVDALVAQRAAVEADIALTK 150


>gi|269966508|ref|ZP_06180591.1| Membrane-fusion protein [Vibrio alginolyticus 40B]
 gi|269828852|gb|EEZ83103.1| Membrane-fusion protein [Vibrio alginolyticus 40B]
          Length = 377

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS   GI+ +   + G ++ QG PL+      T   +   
Sbjct: 42  IEKQAVAVGKIVPA-HSVSIKSQIDGIVGEIYAKVGEKVKQGQPLIKVRPNPTPQALTDA 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
              +  +R   D E +     N +  V +    S  ++ +       S  + V     + 
Sbjct: 101 SAEL--MRSEADLESAKQKLSNLESLVKQDIIPSNYDEYVSARSAVKSAQADVLQKRQNL 158

Query: 159 SVYRSLKMKLTRMR-----------SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLF 206
            + RS +  +   R           ++   ++++ E   S   +  ++    L  M +L 
Sbjct: 159 ELIRSGEASIGDARLTSTIYAPIDGTVLNQKVEVGEPIISTQSSQAATEMMSLADMNSLI 218

Query: 207 EKNAVSQNDLNQQ 219
            K +VS++D  Q 
Sbjct: 219 FKGSVSEHDAAQL 231



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 78/226 (34%), Gaps = 31/226 (13%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-----------ANYLKEISRDLEQN 269
           + +  ++ EL  +  + ++  + ++ L      +             + +K    D+ Q 
Sbjct: 95  QALTDASAELMRSEADLESAKQKLSNLESLVKQDIIPSNYDEYVSARSAVKSAQADVLQK 154

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVP 323
           ++      S    +   R   TI +PI GT++  +              Q +  +M +  
Sbjct: 155 RQNLELIRSGEASIGDARLTSTIYAPIDGTVLNQKV-EVGEPIISTQSSQAATEMMSLA- 212

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                  +  V+      +  G    +    Y D+       ++ K+  I S+  N+ + 
Sbjct: 213 DMNSLIFKGSVSEHDAAQLSPGMPVMLTVAPYPDV---AISGVLTKV-AIQSENLNSPEG 268

Query: 384 QEYYE-----VILKITDLAFSDNNIELRNGF--PAEVLFTAKNTTL 422
               +       +++ +L     ++ LR+GF   A+++       L
Sbjct: 269 NASAKSFDNGFEVEVGELKI-PQDVLLRSGFSSTAQIILKTSENVL 313


>gi|167565436|ref|ZP_02358352.1| hypothetical protein BoklE_22974 [Burkholderia oklahomensis EO147]
          Length = 502

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 85/270 (31%), Gaps = 10/270 (3%)

Query: 27  GIIGLITWSILLPI--EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           G++  + W +L  +   I   SS   + +  V  + SP  GI+ +  V  G       PL
Sbjct: 51  GVVFFVIWMVLTMMFPNIFTRSSERAVVDSQVTLVTSPVEGIVTEQHVAIGKSFEANQPL 110

Query: 85  LTFE--DIETTDLIDLKKVSIKNLR----CHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
           +T +  +I+   LIDL   ++ N +       +           ++D+      S+ E  
Sbjct: 111 MTVQNPNIDRALLIDLTGKALDNQQRYDAARAELAGDESQLAATQHDLQRYQAASQREHA 170

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            D                +      +        +  ++          L  L ++    
Sbjct: 171 ADIHA--LQARLAAAKAQVDQQEDVVNRNQAMQWAGAVSEAYTNASRYQLSILSNAKAAA 228

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +++       S++ +         ++L  R  +     + R       EA  +  N 
Sbjct: 229 AAELEHAITNGDASRSKVYASATDGPVASLAQRSRLLSADIVQRKAEMTQFEAYGQSVNK 288

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           L +  ++  +         S+  I+E    
Sbjct: 289 LIDAEKERLERLTNLEIRSSEPGIVEDVLA 318


>gi|28898773|ref|NP_798378.1| hypothetical protein VP1999 [Vibrio parahaemolyticus RIMD 2210633]
 gi|91226913|ref|ZP_01261510.1| hypothetical protein V12G01_16052 [Vibrio alginolyticus 12G01]
 gi|254229645|ref|ZP_04923056.1| efflux transporter, RND family, MFP subunit [Vibrio sp. Ex25]
 gi|260364153|ref|ZP_05776859.1| membrane-fusion protein [Vibrio parahaemolyticus K5030]
 gi|260877236|ref|ZP_05889591.1| membrane-fusion protein [Vibrio parahaemolyticus AN-5034]
 gi|260897818|ref|ZP_05906314.1| membrane-fusion protein [Vibrio parahaemolyticus Peru-466]
 gi|260901553|ref|ZP_05909948.1| membrane-fusion protein [Vibrio parahaemolyticus AQ4037]
 gi|262393817|ref|YP_003285671.1| membrane-fusion protein [Vibrio sp. Ex25]
 gi|28806991|dbj|BAC60262.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|91188876|gb|EAS75161.1| hypothetical protein V12G01_16052 [Vibrio alginolyticus 12G01]
 gi|151937844|gb|EDN56691.1| efflux transporter, RND family, MFP subunit [Vibrio sp. Ex25]
 gi|262337411|gb|ACY51206.1| membrane-fusion protein [Vibrio sp. Ex25]
 gi|308087602|gb|EFO37297.1| membrane-fusion protein [Vibrio parahaemolyticus Peru-466]
 gi|308090305|gb|EFO40000.1| membrane-fusion protein [Vibrio parahaemolyticus AN-5034]
 gi|308110906|gb|EFO48446.1| membrane-fusion protein [Vibrio parahaemolyticus AQ4037]
 gi|308115204|gb|EFO52744.1| membrane-fusion protein [Vibrio parahaemolyticus K5030]
          Length = 377

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS   GI+ +   + G ++ QG PL+      T   +   
Sbjct: 42  IEKQAVAVGKIVPA-HSVSIKSQIDGIVGEIYAKVGEKVKQGQPLIKVRPNPTPQALTDA 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
              +  +R   D E +     N +  V +    S  ++ +       S  + V     + 
Sbjct: 101 SAEL--MRSEADLESAKQKLSNLESLVKQDIIPSNYDEYVSARSAVKSAQADVLQKRQNL 158

Query: 159 SVYRSLKMKLTRMR-----------SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLF 206
            + RS +  +   R           ++   ++++ E   S   +  ++    L  M +L 
Sbjct: 159 ELIRSGEASIGDARLTSTIYAPIDGTVLNQKVEVGEPIISTQSSQAATEMMSLADMNSLI 218

Query: 207 EKNAVSQNDLNQQ 219
            K +VS++D  Q 
Sbjct: 219 FKGSVSEHDAAQL 231



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 75/221 (33%), Gaps = 29/221 (13%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-----------ANYLKEISRDLEQN 269
           + +  ++ EL  +  + ++  + ++ L      +             + +K    D+ Q 
Sbjct: 95  QALTDASAELMRSEADLESAKQKLSNLESLVKQDIIPSNYDEYVSARSAVKSAQADVLQK 154

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVP 323
           ++      S    +   R   TI +PI GT++  +              Q +  +M +  
Sbjct: 155 RQNLELIRSGEASIGDARLTSTIYAPIDGTVLNQKV-EVGEPIISTQSSQAATEMMSLA- 212

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                  +  V+      +  G    +    Y D+       ++ K+  I S+  N+ + 
Sbjct: 213 DMNSLIFKGSVSEHDAAQLSPGMPVMLTVAPYPDV---AISGVLTKV-AIQSENLNSPEG 268

Query: 384 QEYYE-----VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               +       +++ +L     ++ LR+GF +      K 
Sbjct: 269 NASAKSFDNGFEVEVGELKI-PQDVLLRSGFSSTAQIILKK 308


>gi|324995521|gb|EGC27433.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK678]
          Length = 421

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL              ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYATEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNALKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADNEVTTAQIEAEKAQVTAQTES 208


>gi|307822791|ref|ZP_07653022.1| efflux transporter, RND family, MFP subunit [Methylobacter
           tundripaludum SV96]
 gi|307736395|gb|EFO07241.1| efflux transporter, RND family, MFP subunit [Methylobacter
           tundripaludum SV96]
          Length = 376

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 63/208 (30%), Gaps = 17/208 (8%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           +N Q      +    + ++   +       ELY +  +  ++  + I    E  +   A 
Sbjct: 97  INAQLEQSQANLANAQASLKLAQANEARSKELYAQDYVARSDLDQSIQA-REAAKSQVAS 155

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRA 332
            + +L   +  +    I SP++G +V             S     L  I    +   I  
Sbjct: 156 AIGQLKRDKANKGYTIIKSPVSGVVVSRNVD-IGQTVAASFQTPTLFTIAQDLQHMQIDT 214

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V    +  ++   T       Y D     F+  + +I        N +     Y+V++ 
Sbjct: 215 SVAEADVGGIRVNQTVNFTVDAYPDR---VFQGKVFRIRLDSKVLQNVVT----YDVVIS 267

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + +         L  G  A V       
Sbjct: 268 VNNPEEI-----LLPGMTAFVSIVIDER 290



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 58/168 (34%), Gaps = 31/168 (18%)

Query: 21  TLLSIIGIIGLITW-------------SILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
            +    GI G   W                  I  ++S++G +     +V + +  SG++
Sbjct: 14  LIAIPAGIYGFNVWRAAEEVPHYRTEKIARGSIVKTISANGTLNPVV-LVNVGTQISGVV 72

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            K  V+   ++ +   L   +       ++  + ++ N +  +                L
Sbjct: 73  NKLNVDFNDRVHKDQVLAEIDPSLINAQLEQSQANLANAQASLK---------------L 117

Query: 128 EKAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            +A E+R ++L   D++ +     S        S   S   +L R ++
Sbjct: 118 AQANEARSKELYAQDYVARSDLDQSIQAREAAKSQVASAIGQLKRDKA 165


>gi|299533387|ref|ZP_07046769.1| secretion protein HlyD [Comamonas testosteroni S44]
 gi|298718593|gb|EFI59568.1| secretion protein HlyD [Comamonas testosteroni S44]
          Length = 311

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 58/157 (36%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P      + G+I  E  ++++ S  SG++++  V+ G  + +G P+L   D      + +
Sbjct: 46  PQSQVAVARGKIDVEGGLLDLSSAASGVVQQLLVKEGQSVQKGQPVLRLADDAARADLAV 105

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  ++  +  + T ++ L  L       + A +     L        +         I+
Sbjct: 106 AESELQLAQTKLKTRQNRLPALKATLTRWQSAAKQGAADLQSVDEAVQALRDAQSEVDIA 165

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +   ++  +        L R +L    + +   L + 
Sbjct: 166 AAEVTVAKRKAEQLRALLQRHELRAPEAAVVVRLQAQ 202



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 59/166 (35%), Gaps = 5/166 (3%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--EFANYLKEISRDLEQ 268
           V++++L   +  +      L               +   +     E    L++   +++ 
Sbjct: 105 VAESELQLAQTKLKTRQNRLPALKATLTRWQSAAKQGAADLQSVDEAVQALRDAQSEVDI 164

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
                     K   L    ++  + +P A  +V  Q+    +  Q   P+  ++P  +  
Sbjct: 165 AAAEVTVAKRKAEQLRALLQRHELRAPEAAVVVRLQAQG-GSMLQSGSPVAVLLPK-RPF 222

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK-AIIEKIDPI 373
            +RA+V    +  +++G  A V          ++F  A + +I P+
Sbjct: 223 IVRAEVNESFVTAIREGMKALVTVDADGSAARQEFPAATVLRISPV 268


>gi|262196050|ref|YP_003267259.1| efflux transporter RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
 gi|262079397|gb|ACY15366.1| efflux transporter, RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
          Length = 587

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 84/267 (31%), Gaps = 36/267 (13%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSL---LRALLSSHQKDLTMMKNLFEKNAVSQN----- 214
            L     +   I L R+     SS    + A +      L  +  L +   VS       
Sbjct: 245 QLSETAFQTSGIRLERVSSHRVSSGGVRVPAEIQFDPDRLAHVSPLVDGQMVSVAVTIGD 304

Query: 215 DLNQQERIVYKSTLELRENIHEQKNM--LRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            +   + +    ++EL +   E      +R   +   E      +      R L + ++ 
Sbjct: 305 RVEAGDELATFRSVELGQARAELSRATAVRETAQANLERQQRLRDEGINSERSLLEARQA 364

Query: 273 FADEMSKLTILEKTRE----------QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           F +  +                      T+ SPI G +V  +  +          L  +V
Sbjct: 365 FDEADAARDAARSRLRVFGVRGGSGSDMTLTSPIDGVVVE-RHATRGENVSTEDTLF-VV 422

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
             +   ++ A+   + I  V+ G +AT+          +++   +  +   + +    L 
Sbjct: 423 ADASEVWVIARAYEQHIPLVRVGMSATLTV---GPHEGRQWTGTVSYVSLSLDETTRTL- 478

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGF 409
                 V + ++     +++  LR G 
Sbjct: 479 -----PVRMSVS-----NDDGALRPGM 495



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 14/95 (14%), Positives = 35/95 (36%), Gaps = 5/95 (5%)

Query: 41  EISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDI---ETTDLI 96
              V    EI  + + +  +     G +    V  G ++  G  L TF  +   +    +
Sbjct: 268 SGGVRVPAEIQFDPDRLAHVSPLVDGQMVSVAVTIGDRVEAGDELATFRSVELGQARAEL 327

Query: 97  DLKKVSIKNLRCHIDTEKSALDF-LNNKYDVLEKA 130
                  +  + +++ ++   D  +N++  +LE  
Sbjct: 328 SRATAVRETAQANLERQQRLRDEGINSERSLLEAR 362


>gi|327539858|gb|EGF26461.1| efflux transporter, RND family, MFP subunit [Rhodopirellula baltica
           WH47]
          Length = 515

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 54/181 (29%), Gaps = 23/181 (12%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E Q+++          + F   +++    L+   ++ +                 A L+ 
Sbjct: 137 EGQIVEKNDLLFIIDPRPFEAELAAAQARLQQSESQFKQAKAMTEVARANLLQSEAQLNL 196

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
                   +NL E+NA SQ++L+ +E    K+  ++        +    I     E  L 
Sbjct: 197 ADVRYKRTQNLVERNASSQDELDDREAEFLKAKADIEGVRASLNSSEAAIATAQAEIELA 256

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A                       +   E   +   I +PI G I   +  +  N    
Sbjct: 257 KAG----------------------VETAELNLQYTRIRAPITGRISR-KYVTEGNLIAG 293

Query: 315 S 315
            
Sbjct: 294 G 294



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/188 (11%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++VE+++   G ++    + G  + +   L   +           +  +   +  +   +
Sbjct: 118 DLVEVRARVGGYLQSVHFDEGQIVEKNDLLFIIDPRPF-------EAELAAAQARLQQSE 170

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           S         +V        E QL   L       ++      +S    L  +       
Sbjct: 171 SQFKQAKAMTEVARANLLQSEAQL--NLADVRYKRTQNLVERNASSQDELDDREAEFLKA 228

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
             +   +    +   A +++ Q ++     L +    +     Q  RI    T  +    
Sbjct: 229 KADIEGVRASLNSSEAAIATAQAEI----ELAKAGVETAELNLQYTRIRAPITGRISRKY 284

Query: 235 HEQKNMLR 242
             + N++ 
Sbjct: 285 VTEGNLIA 292


>gi|327459878|gb|EGF06218.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK1057]
          Length = 421

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL              ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYATEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNALKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADNEVTTAQIEAEKAQVTAQTES 208


>gi|299139845|ref|ZP_07033017.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX8]
 gi|298598199|gb|EFI54365.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX8]
          Length = 524

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 61/180 (33%), Gaps = 16/180 (8%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +   + ++    E     A  L   +    Q       E++KL    K     TI +P 
Sbjct: 160 ARQNQKAMSASSVEGVASGAASLSSAAEQRLQQWDIPQSEIAKLKETGKAISDLTIDAPA 219

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G I    +   + Y + S  L   V      ++ A+V    I  +K G  A +    Y 
Sbjct: 220 SGYITERNAL-PNMYVEPSTRL-YTVADLSRVWVNAQVFQNDIGRLKPGDRAAITVDAYP 277

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           D     F   IE I P +              V +++   A S+  ++L+ G    V   
Sbjct: 278 DRT---FSGRIEDILPQVDMTTRT--------VRVRL---AISNPGVKLKPGMFVNVDLK 323


>gi|256221664|ref|NP_001157770.1| plectin isoform 1e [Rattus norvegicus]
          Length = 4522

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1318 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1377

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1378 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1430

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1431 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1489

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1490 AELALRVKAEAEAAREKQR 1508



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2158 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2211

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2212 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2271

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2272 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2328

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2329 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2377



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2295 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2354

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2355 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2412

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2413 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2472

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2473 EKDSLLQRERFIEQ 2486



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1615 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1674

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1675 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1724

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1725 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1783

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1784 LAEEAKRQRQLAEED 1798



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2207 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2266

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2267 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2326

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2327 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2386

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2387 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2417



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1316 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1375

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1376 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1435

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1436 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1495

Query: 291  T 291
             
Sbjct: 1496 V 1496



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1526 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1585

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1586 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1645

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1646 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1705

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1706 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1749



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1811 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1870

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1871 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1930

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1931 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 1990

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 1991 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2028



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1431 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1484

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1485 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1542

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1543 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1600

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1601 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1632


>gi|238751704|ref|ZP_04613193.1| HlyD family secretion protein [Yersinia rohdei ATCC 43380]
 gi|238710114|gb|EEQ02343.1| HlyD family secretion protein [Yersinia rohdei ATCC 43380]
          Length = 352

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/263 (12%), Positives = 87/263 (33%), Gaps = 26/263 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E +   R + L       +    +     +     +   +   + +   N    + + 
Sbjct: 70  VAENSKVRRGDLLFTIEPDIYRLRVEQAQAELKMAEATRDTQQRTVVAEQSNAAITDEQI 129

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              RA L    + L  ++ L  K  V+   ++      + + + L++ + +       ++
Sbjct: 130 VRARANLKLATQTLARLQPLLPKGYVTAQQVDDAATAKHDAEISLKQALKQSFAAEALVS 189

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                  ++       + L I E+      + +P  G +V    
Sbjct: 190 ST-------------------AASEALVVARRAALAIAERELTNTQVHAPHDGRVVGLTV 230

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            +   +    Q +  ++ +++  +  A     +++++K G  ATV        R++  + 
Sbjct: 231 ST-GEFVIPDQAIFTLI-NTEHWHASAFFRETELKNIKVGDCATVYVMA---DRQRAIQG 285

Query: 366 IIEKIDPIISQQD--NNLQTQEY 386
            +E I   +S +D  N  +   Y
Sbjct: 286 RVEGIGWGVSSEDLFNIPRGLPY 308


>gi|254444302|ref|ZP_05057778.1| efflux transporter, RND family, MFP subunit, putative
           [Verrucomicrobiae bacterium DG1235]
 gi|198258610|gb|EDY82918.1| efflux transporter, RND family, MFP subunit, putative
           [Verrucomicrobiae bacterium DG1235]
          Length = 643

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 64/172 (37%), Gaps = 18/172 (10%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +L    EL      + ++ +   +R+  +      D++  +    + ++   + +PI G
Sbjct: 172 ELLTAQRELLTSFRSDPSSSITAAAREKLRLWDLLPDQIDAILESGQAKDHFILRAPIGG 231

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKL-TYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
            +V  +     +Y +  + L +IV   +L  Y+ A  +   +  ++ G         +  
Sbjct: 232 VVVSKKVN-EGDYVKTGESLFRIVDLDELWLYLDAYES--DLAWLRYGQDVAFTVEAFP- 287

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              + F   I  I+P +  +   +Q      V + +      +N   L+ G 
Sbjct: 288 --GESFHGQIAFIEPEVDSKTRTVQ------VRVNVP-----NNGQRLKPGM 326


>gi|148654447|ref|YP_001274652.1| RND family efflux transporter MFP subunit [Roseiflexus sp. RS-1]
 gi|148566557|gb|ABQ88702.1| efflux transporter, RND family, MFP subunit [Roseiflexus sp. RS-1]
          Length = 586

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/242 (11%), Positives = 71/242 (29%), Gaps = 28/242 (11%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----------------LR 107
           G + +  V  G ++  GTPL+  ++ E    +   + ++                    +
Sbjct: 83  GRVAEVLVAEGDRVAAGTPLIRLDNREAMAQVASARAALAQAEADLKQLQEGATPEEIAQ 142

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC----SKVFNYGISSVYRS 163
                E +    +     V E    +   ++ +   + ++      +       S++  +
Sbjct: 143 ARAQVEAARGALVQISGSVTEADIAAARARVDEARARLNALQGAPNNDQLTAARSALTEA 202

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQ--- 219
                 +  ++   +LD E +       L   Q      + NL    A  ++ L      
Sbjct: 203 QAALERQRSALSAAKLDAERQVFERANRLRDAQTAFAAARDNLARVEADGKDPLTGAPLS 262

Query: 220 ---ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              +R    +  +    + + +  L      Y+ A       L E    +   Q      
Sbjct: 263 DAGKRTYADAFAQAERALADAELALNQARIAYETARQNEITGLAEAEARVATAQANLDAL 322

Query: 277 MS 278
           ++
Sbjct: 323 LN 324



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/339 (13%), Positives = 97/339 (28%), Gaps = 25/339 (7%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            E    ++ ++ ++      +D E+   +  N   D       +R+              
Sbjct: 200 TEAQAALERQRSALSA--AKLDAERQVFERANRLRDAQTAFAAARDNLARVEADGKDPLT 257

Query: 150 SKVFNYGISSVYRSLKMKLTRM---RSIYLNRLDLE---NKSSLLRALLSSHQKDLTMMK 203
               +      Y     +  R      + LN+  +     + + +  L  +  +  T   
Sbjct: 258 GAPLSDAGKRTYADAFAQAERALADAELALNQARIAYETARQNEITGLAEAEARVATAQA 317

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-- 261
           NL      + + +      + ++  +L   + EQ+            A       L    
Sbjct: 318 NLDALLNPNPDRIAAARAALAQAEADLARLLGEQRQGALAAQRANLAAAEANLARLTADP 377

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            + DL + Q   A   ++L + +   +  T+ +P  G +      +      Q   L  I
Sbjct: 378 RATDLARAQARVAQAQAQLDLAQIRLDDTTLTAPFDGVVARINV-APGEQVAQGPVLTLI 436

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                   +   V    +  V  G    V                +++I P    Q  N 
Sbjct: 437 --DVSRFKVTVTVDEVDVVRVAPGQDVEVLIDALGP---PPQIGRVQRIAP----QATNE 487

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +    YEV     +L  +  +  LR+G  A         
Sbjct: 488 RNVTAYEV-----ELEVAPGDRPLRSGMTASATIITAKR 521


>gi|40849906|gb|AAR95665.1| plectin 11 [Rattus norvegicus]
          Length = 4545

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1341 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1400

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1401 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1453

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1454 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1512

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1513 AELALRVKAEAEAAREKQR 1531



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2181 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2234

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2235 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2294

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2295 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2351

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2352 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2400



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2318 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2377

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2378 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2435

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2436 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2495

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2496 EKDSLLQRERFIEQ 2509



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1638 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1697

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1698 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1747

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1748 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1806

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1807 LAEEAKRQRQLAEED 1821



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2230 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2289

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2290 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2349

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2350 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2409

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2410 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2440



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1339 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1398

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1399 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1458

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1459 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1518

Query: 291  T 291
             
Sbjct: 1519 V 1519



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1549 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1608

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1609 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1668

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1669 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1728

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1729 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1772



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1834 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1893

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1894 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1953

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1954 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2013

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2014 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2051



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1454 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1507

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1508 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1565

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1566 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1623

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1624 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1655


>gi|88860828|ref|ZP_01135464.1| putative substate-binding protein involved in drug resistance
           [Pseudoalteromonas tunicata D2]
 gi|88817041|gb|EAR26860.1| putative substate-binding protein involved in drug resistance
           [Pseudoalteromonas tunicata D2]
          Length = 392

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 64/211 (30%), Gaps = 25/211 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY---------DEANLEFANYLKEIS 263
           ++++ + + IV  S +E++       N  R +              E      +      
Sbjct: 94  ESEVERIQAIVRASEIEIKHAKTRLINFERQLKRQQELNDAGLSQQETLDNIESARDLAK 153

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-----SQPL 318
            D+E    +     + L+I E    +    +P++G +                      L
Sbjct: 154 IDIEARYESLNQAKASLSIAEDRLSKSVFRAPMSGLLASVNIKEGETVIAGTTNIIGSDL 213

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M +V          +V    I  +K+G  A +    Y +     FK  +  I      Q 
Sbjct: 214 M-LVADPSAILAELRVDETDIASIKEGQVADIYAAAYPNQ---PFKGKVINIGTSAKNQA 269

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            +       +V+L  TD        +L  G 
Sbjct: 270 GSQGLSFRVKVLLDPTDR-------QLYAGM 293



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 49/137 (35%), Gaps = 3/137 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  I  S+ +SG ++    V  ++S  +G + K  VE G  + +   L+  +      
Sbjct: 37  AQIGRISDSILASGNLVFNTQVQ-LRSEVTGRVAKVFVEEGQSVQENDILMQLDTQAFES 95

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            ++  +  ++     I   K+ L  +N +  +  +   +              +   +  
Sbjct: 96  EVERIQAIVRASEIEIKHAKTRL--INFERQLKRQQELNDAGLSQQETLDNIESARDLAK 153

Query: 155 YGISSVYRSLKMKLTRM 171
             I + Y SL      +
Sbjct: 154 IDIEARYESLNQAKASL 170


>gi|323165713|gb|EFZ51499.1| hlyD family secretion family protein [Shigella sonnei 53G]
          Length = 273

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 68  AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 126

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 127 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 184

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 185 RAYVDERYLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 241

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 242 VYRLRIVVTDADDA-----LRQGMPVTV 264


>gi|256221749|ref|NP_001157775.1| plectin isoform 1d [Rattus norvegicus]
          Length = 4512

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1308 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1367

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1368 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1420

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1421 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1479

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1480 AELALRVKAEAEAAREKQR 1498



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2148 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2201

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2202 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2261

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2262 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2318

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2319 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2367



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2285 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2344

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2345 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2402

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2403 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2462

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2463 EKDSLLQRERFIEQ 2476



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1605 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1664

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1665 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1714

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1715 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1773

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1774 LAEEAKRQRQLAEED 1788



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2197 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2256

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2257 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2316

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2317 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2376

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2377 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2407



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1306 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1365

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1366 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1425

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1426 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1485

Query: 291  T 291
             
Sbjct: 1486 V 1486



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1516 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1575

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1576 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1635

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1636 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1695

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1696 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1739



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1801 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1860

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1861 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1920

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1921 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 1980

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 1981 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2018



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1421 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1474

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1475 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1532

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1533 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1590

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1591 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1622


>gi|256221612|ref|NP_001157768.1| plectin isoform 1c [Rattus norvegicus]
          Length = 4573

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1369 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1428

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1429 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1481

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1482 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1540

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1541 AELALRVKAEAEAAREKQR 1559



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2209 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2262

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2263 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2322

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2323 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2379

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2380 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2428



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2346 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2405

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2406 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2463

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2464 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2523

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2524 EKDSLLQRERFIEQ 2537



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1666 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1725

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1726 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1775

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1776 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1834

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1835 LAEEAKRQRQLAEED 1849



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2258 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2317

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2318 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2377

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2378 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2437

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2438 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2468



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1367 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1426

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1427 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1486

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1487 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1546

Query: 291  T 291
             
Sbjct: 1547 V 1547



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1577 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1636

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1637 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1696

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1697 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1756

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1757 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1800



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1862 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1921

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1922 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1981

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1982 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2041

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2042 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2079



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1482 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1535

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1536 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1593

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1594 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1651

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1652 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1683


>gi|288818993|ref|YP_003433341.1| heavy metal efflux pump, CzcB family [Hydrogenobacter thermophilus
           TK-6]
 gi|288788393|dbj|BAI70140.1| heavy metal efflux pump, CzcB family [Hydrogenobacter thermophilus
           TK-6]
 gi|308752578|gb|ADO46061.1| efflux transporter, RND family, MFP subunit [Hydrogenobacter
           thermophilus TK-6]
          Length = 341

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 84/260 (32%), Gaps = 62/260 (23%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNR----LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           + S+   +  ++ R + + + +     DL  +   L A L+  ++   + K L++  A+ 
Sbjct: 70  LQSIKVQVGDRVKRGQVLAVVKSPDTTDLYAQKLSLSAQLAQAERLFKLKKELYQVGAIP 129

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +++L   E        +LR                                         
Sbjct: 130 KSELMDAETNYQVLKAQLRG---------------------------------------- 149

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                 KL IL        I+SP+ G +    +    +   Q+  ++ IV +     + A
Sbjct: 150 ---IEEKLKILGGGMGTSNIVSPMDGVVYQISAH-VGDAVDQATDILSIV-NPSKVVLTA 204

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  + +  +K G         Y     KKF+  ++ +  +     + +      +V ++
Sbjct: 205 LVHDRDLPKIKVGERVEFFVSTYP---HKKFEGRVKYVSDVEDPDTHTV------KVYIE 255

Query: 393 ITDLAFSDN----NIELRNG 408
            T+          NI +  G
Sbjct: 256 PTEREPFKINMFFNIRILAG 275



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 43/110 (39%), Gaps = 2/110 (1%)

Query: 44  VSSSGEILNEDN-VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V ++G +  + +  V+I +  +G ++  +V+ G ++ +G  L   +  +TTDL   +K+S
Sbjct: 46  VEATGLVQPDKDGTVKITARSAGTLQSIKVQVGDRVKRGQVLAVVKSPDTTDLY-AQKLS 104

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +       +        L     + +      E        +      K+
Sbjct: 105 LSAQLAQAERLFKLKKELYQVGAIPKSELMDAETNYQVLKAQLRGIEEKL 154


>gi|255524058|ref|ZP_05391019.1| EmrA-related transporter protein [Clostridium carboxidivorans P7]
 gi|296188485|ref|ZP_06856873.1| multidrug efflux MFS membrane fusion family protein [Clostridium
           carboxidivorans P7]
 gi|255512195|gb|EET88474.1| EmrA-related transporter protein [Clostridium carboxidivorans P7]
 gi|296046749|gb|EFG86195.1| multidrug efflux MFS membrane fusion family protein [Clostridium
           carboxidivorans P7]
          Length = 218

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 56/179 (31%), Gaps = 6/179 (3%)

Query: 242 RHINELYDEANLEFANYLKEISRDLEQ--NQRTFADEMSKLTILEKTREQKTILSPIAGT 299
             +N    + + + +  L E S +     N+               T E   I SPI G 
Sbjct: 40  AKLNADLLKVSPQISGKLLEFSVEEGDKVNKDQIIGRQDIAGQTSDTLENAIIRSPIDGI 99

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I+  Q+          Q L  ++      Y+ A +   ++  ++ G    +    Y + +
Sbjct: 100 IIKKQAN-VGEMCTAGQTLAYVINQDD-IYVTANIEETKLTKLRSGEKVDITIDKYKNKK 157

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN--NIELRNGFPAEVLFT 416
                  I +             +  + +V+ K+      D   N++L  G    V   
Sbjct: 158 FTGKIDSIGEASAATFSLLPTSTSANFTKVVQKVPVKIKLDKYSNVKLLPGINVVVNIH 216


>gi|198282574|ref|YP_002218895.1| secretion protein HlyD family protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218668092|ref|YP_002424764.1| secretion protein, HlyD family [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198247095|gb|ACH82688.1| secretion protein HlyD family protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218520305|gb|ACK80891.1| secretion protein, HlyD family [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 337

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 94/279 (33%), Gaps = 25/279 (8%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           ++V   G   V    +  +  ++         E +++ ++A ++  + +++  +  ++  
Sbjct: 61  NQVVQAGQPLVEVDPRAYVYDVQKAEAELTQAERQTAAIQANIAGARANISADQVNYQN- 119

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             ++++  +   +  +  L  ++  +E          L  +        L E       N
Sbjct: 120 --ARHNAQRAAALAAQKYLSAQQADNEMTAAKSAGARLTADQAA-----LAETQAQQVLN 172

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               A   + L        + T+ +PIAG +         +    +Q L  ++  +   +
Sbjct: 173 GARIAAAKAALRTARLYLSETTLYAPIAGVVSKVDKIHVGDVVNVNQDLFPLI-GNAEYW 231

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQDN 379
           + A      +  V  G +A +    Y D     FK  +  +           P  +   N
Sbjct: 232 VEANYKETDLSRVHPGQSAKITVDMYPDH---PFKGKVVSLSGGAGNAFSLLPPENATGN 288

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            ++  +   V + IT+    D+   LR G  A V     
Sbjct: 289 WVKVTQRVPVRVLITNP---DSRFPLRIGTSASVTVDTG 324



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 45/129 (34%), Gaps = 12/129 (9%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLR 107
           +VV I    +G I    V +   +  G PL+  +         +    +   +     ++
Sbjct: 41  HVVNIAPRVTGHIVAIYVHDNQVVQAGQPLVEVDPRAYVYDVQKAEAELTQAERQTAAIQ 100

Query: 108 CHIDTEKSAL-----DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            +I   ++ +     ++ N +++    A  + ++ L         T +K     +++   
Sbjct: 101 ANIAGARANISADQVNYQNARHNAQRAAALAAQKYLSAQQADNEMTAAKSAGARLTADQA 160

Query: 163 SLKMKLTRM 171
           +L     + 
Sbjct: 161 ALAETQAQQ 169


>gi|149066130|gb|EDM16003.1| rCG59523, isoform CRA_a [Rattus norvegicus]
          Length = 4585

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1381 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1440

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1441 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1493

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1494 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1552

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1553 AELALRVKAEAEAAREKQR 1571



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2221 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2274

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2275 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2334

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2335 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2391

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2392 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2440



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2358 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2417

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2418 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2475

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2476 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2535

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2536 EKDSLLQRERFIEQ 2549



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1678 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1737

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1738 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1787

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1788 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1846

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1847 LAEEAKRQRQLAEED 1861



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2270 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2329

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2330 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2389

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2390 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2449

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2450 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2480



 Score = 46.2 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1379 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1438

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1439 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1498

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1499 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1558

Query: 291  T 291
             
Sbjct: 1559 V 1559



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1589 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1648

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1649 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1708

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1709 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1768

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1769 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1812



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1874 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1933

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1934 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1993

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1994 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2053

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2054 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2091



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1494 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1547

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1548 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1605

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1606 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1663

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1664 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1695


>gi|40849890|gb|AAR95657.1| plectin 3 [Rattus norvegicus]
          Length = 4523

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1319 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1378

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1379 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1431

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1432 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1490

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1491 AELALRVKAEAEAAREKQR 1509



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2159 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2212

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2213 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2272

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2273 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2329

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2330 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2378



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2296 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2355

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2356 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2413

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2414 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2473

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2474 EKDSLLQRERFIEQ 2487



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1616 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1675

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1676 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1725

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1726 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1784

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1785 LAEEAKRQRQLAEED 1799



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2208 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2267

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2268 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2327

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2328 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2387

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2388 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2418



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1317 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1376

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1377 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1436

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1437 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1496

Query: 291  T 291
             
Sbjct: 1497 V 1497



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1527 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1586

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1587 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1646

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1647 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1706

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1707 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1750



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1812 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1871

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1872 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1931

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1932 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 1991

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 1992 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2029



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1432 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1485

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1486 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1543

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1544 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1601

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1602 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1633


>gi|40849886|gb|AAR95655.1| plectin 1 [Rattus norvegicus]
          Length = 4574

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1370 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1429

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1430 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1482

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1483 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1541

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1542 AELALRVKAEAEAAREKQR 1560



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2210 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2263

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2264 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2323

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2324 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2380

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2381 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2429



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2347 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2406

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2407 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2464

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2465 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2524

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2525 EKDSLLQRERFIEQ 2538



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1667 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1726

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1727 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1776

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1777 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1835

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1836 LAEEAKRQRQLAEED 1850



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2259 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2318

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2319 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2378

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2379 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2438

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2439 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2469



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1368 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1427

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1428 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1487

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1488 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1547

Query: 291  T 291
             
Sbjct: 1548 V 1548



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1578 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1637

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1638 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1697

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1698 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1757

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1758 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1801



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1863 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1922

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1923 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1982

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1983 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2042

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2043 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2080



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1483 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1536

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1537 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1594

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1595 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1652

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1653 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1684


>gi|146278293|ref|YP_001168452.1| secretion protein HlyD family protein [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556534|gb|ABP71147.1| secretion protein HlyD family protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 368

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 72/257 (28%), Gaps = 26/257 (10%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++  + +       + +L     +    +L   + L  K   +   L+       ++   
Sbjct: 116 QVEQLKVAHAQAVAQENLAADDAAYLANELVRQQALSTKGVSATTALDDARHEAQRA--- 172

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                         +  +  +A       L  ++     +       ++           
Sbjct: 173 ------------AELLVVARQATASALAALGGVADGPVDDHPAVRSALAARDEAAYQLSL 220

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P  G I    SF         Q L  +V      +I A     Q+  +  G  A 
Sbjct: 221 TEVRAPADGVIYRAASFKPGQMVTAGQSLFALVETQD-VWIDANFKETQLAGIAPGQKAE 279

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE----- 404
           V    +    ++ ++A +E +      + + L  Q      +K+T         E     
Sbjct: 280 V---TFDLRPDRPYEATVESVGAGTGSEFSLLPAQNATGNWVKVTQRVPVRLRFEEGAEL 336

Query: 405 --LRNGFPAEVLFTAKN 419
             L +G  AEV      
Sbjct: 337 AGLASGLSAEVSVDTGR 353



 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 50/165 (30%), Gaps = 5/165 (3%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
           VV I S  SG + +  V +   + +G  L   +       +   + ++   R  ++  K 
Sbjct: 63  VVAIASEVSGRVTEVSVADNRPVQKGDILFVIDPEPRRLALAKAEAAVAAARLQVEQLKV 122

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           A      + ++          +L+          S       +++  +          + 
Sbjct: 123 AHAQAVAQENLAADDAAYLANELVRQQALSTKGVS-----ATTALDDARHEAQRAAELLV 177

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           + R    +  + L  +      D   +++       +   L+  E
Sbjct: 178 VARQATASALAALGGVADGPVDDHPAVRSALAARDEAAYQLSLTE 222


>gi|16131908|ref|NP_418506.1| membrane fusion protein of efflux pump [Escherichia coli str. K-12
           substr. MG1655]
 gi|89110803|ref|AP_004583.1| predicted membrane fusion protein of efflux pump [Escherichia coli
           str. K-12 substr. W3110]
 gi|170021919|ref|YP_001726873.1| multidrug resistance protein MdtN [Escherichia coli ATCC 8739]
 gi|170083536|ref|YP_001732856.1| membrane fusion protein of efflux pump [Escherichia coli str. K-12
           substr. DH10B]
 gi|194437232|ref|ZP_03069330.1| multidrug resistance protein MdtN [Escherichia coli 101-1]
 gi|218707704|ref|YP_002415223.1| multidrug resistance protein MdtN [Escherichia coli UMN026]
 gi|238903191|ref|YP_002928987.1| putative membrane fusion protein of efflux pump [Escherichia coli
           BW2952]
 gi|253775289|ref|YP_003038120.1| multidrug resistance protein MdtN [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254037089|ref|ZP_04871166.1| multidrug resistance protein MdtN [Escherichia sp. 1_1_43]
 gi|254164017|ref|YP_003047125.1| multidrug resistance protein MdtN [Escherichia coli B str. REL606]
 gi|256024957|ref|ZP_05438822.1| multidrug resistance protein MdtN [Escherichia sp. 4_1_40B]
 gi|260858192|ref|YP_003232083.1| putative membrane fusion protein of efflux pump [Escherichia coli
           O26:H11 str. 11368]
 gi|293402720|ref|ZP_06646817.1| multidrug resistance protein MdtN [Escherichia coli FVEC1412]
 gi|298378249|ref|ZP_06988133.1| multidrug resistance protein mdtN [Escherichia coli FVEC1302]
 gi|300897501|ref|ZP_07115916.1| efflux pump membrane protein [Escherichia coli MS 198-1]
 gi|300916961|ref|ZP_07133661.1| efflux pump membrane protein [Escherichia coli MS 115-1]
 gi|300932085|ref|ZP_07147378.1| efflux pump membrane protein [Escherichia coli MS 187-1]
 gi|300946671|ref|ZP_07160928.1| efflux pump membrane protein [Escherichia coli MS 116-1]
 gi|300957493|ref|ZP_07169704.1| efflux pump membrane protein [Escherichia coli MS 175-1]
 gi|301019246|ref|ZP_07183440.1| efflux pump membrane protein [Escherichia coli MS 196-1]
 gi|301021639|ref|ZP_07185631.1| efflux pump membrane protein [Escherichia coli MS 69-1]
 gi|301644095|ref|ZP_07244106.1| efflux pump membrane protein [Escherichia coli MS 146-1]
 gi|307140774|ref|ZP_07500130.1| multidrug resistance protein MdtN [Escherichia coli H736]
 gi|331644828|ref|ZP_08345945.1| multidrug resistance protein MdtN [Escherichia coli H736]
 gi|331655909|ref|ZP_08356897.1| multidrug resistance protein MdtN [Escherichia coli M718]
 gi|331675613|ref|ZP_08376360.1| multidrug resistance protein MdtN [Escherichia coli TA280]
 gi|418560|sp|P32716|MDTN_ECOLI RecName: Full=Multidrug resistance protein mdtN
 gi|396417|gb|AAC43176.1| ORF_f343 [Escherichia coli str. K-12 substr. MG1655]
 gi|1790519|gb|AAD13465.1| membrane fusion protein of efflux pump [Escherichia coli str. K-12
           substr. MG1655]
 gi|85676834|dbj|BAE78084.1| predicted membrane fusion protein of efflux pump [Escherichia coli
           str. K12 substr. W3110]
 gi|169756847|gb|ACA79546.1| efflux pump membrane protein [Escherichia coli ATCC 8739]
 gi|169891371|gb|ACB05078.1| predicted membrane fusion protein of efflux pump [Escherichia coli
           str. K-12 substr. DH10B]
 gi|194423788|gb|EDX39777.1| multidrug resistance protein MdtN [Escherichia coli 101-1]
 gi|218434801|emb|CAR15734.1| membrane fusion protein of efflux pump [Escherichia coli UMN026]
 gi|226840195|gb|EEH72197.1| multidrug resistance protein MdtN [Escherichia sp. 1_1_43]
 gi|238862649|gb|ACR64647.1| predicted membrane fusion protein of efflux pump [Escherichia coli
           BW2952]
 gi|242379609|emb|CAQ34431.1| predicted membrane fusion protein of efflux pump, subunit of SdsRQP
           multidrug efflux pump [Escherichia coli BL21(DE3)]
 gi|253326333|gb|ACT30935.1| efflux pump membrane protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253975918|gb|ACT41589.1| predicted membrane fusion protein of efflux pump [Escherichia coli
           B str. REL606]
 gi|253980074|gb|ACT45744.1| predicted membrane fusion protein of efflux pump [Escherichia coli
           BL21(DE3)]
 gi|257756841|dbj|BAI28343.1| predicted membrane fusion protein of efflux pump [Escherichia coli
           O26:H11 str. 11368]
 gi|291429635|gb|EFF02649.1| multidrug resistance protein MdtN [Escherichia coli FVEC1412]
 gi|298280583|gb|EFI22084.1| multidrug resistance protein mdtN [Escherichia coli FVEC1302]
 gi|299882295|gb|EFI90506.1| efflux pump membrane protein [Escherichia coli MS 196-1]
 gi|300315769|gb|EFJ65553.1| efflux pump membrane protein [Escherichia coli MS 175-1]
 gi|300358722|gb|EFJ74592.1| efflux pump membrane protein [Escherichia coli MS 198-1]
 gi|300397928|gb|EFJ81466.1| efflux pump membrane protein [Escherichia coli MS 69-1]
 gi|300415789|gb|EFJ99099.1| efflux pump membrane protein [Escherichia coli MS 115-1]
 gi|300453650|gb|EFK17270.1| efflux pump membrane protein [Escherichia coli MS 116-1]
 gi|300460143|gb|EFK23636.1| efflux pump membrane protein [Escherichia coli MS 187-1]
 gi|301077534|gb|EFK92340.1| efflux pump membrane protein [Escherichia coli MS 146-1]
 gi|309704550|emb|CBJ03899.1| multidrug resistance protein [Escherichia coli ETEC H10407]
 gi|315617460|gb|EFU98066.1| multidrug resistance protein mdtN [Escherichia coli 3431]
 gi|323155868|gb|EFZ42036.1| multidrug resistance protein mdtN [Escherichia coli EPECa14]
 gi|323380530|gb|ADX52798.1| efflux pump membrane protein [Escherichia coli KO11]
 gi|323935491|gb|EGB31824.1| efflux pump membrane protein [Escherichia coli E1520]
 gi|323940267|gb|EGB36460.1| efflux pump membrane protein [Escherichia coli E482]
 gi|323960428|gb|EGB56063.1| efflux pump membrane protein [Escherichia coli H489]
 gi|323969779|gb|EGB65060.1| efflux pump membrane protein [Escherichia coli TA007]
 gi|331035803|gb|EGI08041.1| multidrug resistance protein MdtN [Escherichia coli H736]
 gi|331046263|gb|EGI18353.1| multidrug resistance protein MdtN [Escherichia coli M718]
 gi|331067221|gb|EGI38629.1| multidrug resistance protein MdtN [Escherichia coli TA280]
 gi|332346089|gb|AEE59423.1| multidrug resistance protein MdtN [Escherichia coli UMNK88]
          Length = 343

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|331665757|ref|ZP_08366651.1| multidrug resistance protein MdtN [Escherichia coli TA143]
 gi|331056808|gb|EGI28802.1| multidrug resistance protein MdtN [Escherichia coli TA143]
          Length = 343

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQASDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQASDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|258511483|ref|YP_003184917.1| secretion protein HlyD family protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478209|gb|ACV58528.1| secretion protein HlyD family protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 403

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 80/242 (33%), Gaps = 20/242 (8%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            DL  K    + +++  Q++  +++   E+NA + N +    R   +  +   E +H   
Sbjct: 114 EDLRKKYIEAQEIVADDQREEALLE--AEQNAANLNAVTSGSRRDNQQLIGQSEQLHSNG 171

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                  E+  + N    N L      L+  Q     ++  LT L+ +     + SP+ G
Sbjct: 172 LQSPAQEEVQQDQNA--INLLSAEEATLQAEQAAIEAKLDMLTALQ-SLRNSELTSPVNG 228

Query: 299 TIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            I   Q  +        Q    L+          + A +  + +  V  G    +     
Sbjct: 229 EITSLQVPA-GAQLSPYQEACTLISTTSTDAHAKVVATINAQDVSRVHVGEHVDIS---- 283

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +      F   +E I P    Q      Q  Y+V ++I   +      ++ NG       
Sbjct: 284 SPDISGSFTGTVELISPFAVNQSQLSDYQ--YQVYIEINHASP-----QMLNGMSVNCSI 336

Query: 416 TA 417
             
Sbjct: 337 YT 338



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 8/164 (4%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE----DIETTDLIDLK 99
           V+ +G I  + ++V I S   G I K+ V  GS++  G  L  F     + E  + +  K
Sbjct: 61  VTVTGTI-VDQDIVSISSSAGGQIAKWMVHVGSRVKAGQILAYFSNYSINQEIYEDLRKK 119

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE--EQLLDFLGKYHSTCSKV-FNYG 156
            +  + +      E++ L+   N  ++      SR   +QL+    + HS   +      
Sbjct: 120 YIEAQEIVADDQREEALLEAEQNAANLNAVTSGSRRDNQQLIGQSEQLHSNGLQSPAQEE 179

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
           +     ++ +      ++   +  +E K  +L AL S    +LT
Sbjct: 180 VQQDQNAINLLSAEEATLQAEQAAIEAKLDMLTALQSLRNSELT 223


>gi|149066131|gb|EDM16004.1| rCG59523, isoform CRA_b [Rattus norvegicus]
          Length = 4573

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1369 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1428

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1429 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1481

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1482 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1540

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1541 AELALRVKAEAEAAREKQR 1559



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2209 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2262

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2263 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2322

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2323 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2379

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2380 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2428



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2346 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2405

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2406 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2463

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2464 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2523

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2524 EKDSLLQRERFIEQ 2537



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1666 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1725

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1726 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1775

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1776 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1834

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1835 LAEEAKRQRQLAEED 1849



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2258 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2317

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2318 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2377

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2378 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2437

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2438 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2468



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1367 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1426

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1427 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1486

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1487 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1546

Query: 291  T 291
             
Sbjct: 1547 V 1547



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1577 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1636

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1637 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1696

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1697 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1756

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1757 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1800



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1862 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1921

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1922 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1981

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1982 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 2041

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 2042 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2079



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1482 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1535

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1536 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1593

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1594 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1651

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1652 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1683


>gi|40849898|gb|AAR95661.1| plectin 7 [Rattus norvegicus]
          Length = 4513

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1309 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1368

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1369 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1421

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1422 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1480

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1481 AELALRVKAEAEAAREKQR 1499



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2149 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2202

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2203 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2262

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2263 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2319

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2320 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2368



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2286 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2345

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2346 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2403

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2404 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2463

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2464 EKDSLLQRERFIEQ 2477



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1606 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1665

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1666 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1715

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1716 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1774

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1775 LAEEAKRQRQLAEED 1789



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2198 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2257

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2258 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2317

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2318 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2377

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2378 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2408



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1307 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1366

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1367 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1426

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1427 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1486

Query: 291  T 291
             
Sbjct: 1487 V 1487



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1517 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1576

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1577 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1636

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1637 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1696

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1697 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1740



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1802 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1861

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1862 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1921

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1922 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 1981

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 1982 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 2019



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1422 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1475

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1476 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1533

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1534 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1591

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1592 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1623


>gi|308067983|ref|YP_003869588.1| membrane-fusion protein [Paenibacillus polymyxa E681]
 gi|305857262|gb|ADM69050.1| Membrane-fusion protein [Paenibacillus polymyxa E681]
          Length = 454

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 83/253 (32%), Gaps = 22/253 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL----DFL 120
           G I +  V+ G Q+ +G  L   E  E  D +   + ++   + ++   K+ +      +
Sbjct: 59  GRIDQMLVKEGDQVKKGQVLAHLESRELEDKVKQAQAALLAAKSNVSKAKAGVLQAQAGV 118

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                 +  A   + +          ++ S++     ++     K+   +  +       
Sbjct: 119 GQAQATVSAAQAKKSQGTTSVSVTAEASSSQIEQAKAAANAAKAKLDALKSGARPQELEQ 178

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ---------------ERIVYK 225
           L+    + +  L    K+L   K L E  A +Q  L+Q                +++   
Sbjct: 179 LQVSVKIAKETLDLTVKNLERAKKLQEAGAATQASLDQATLEHQQAVAKYNAESQKLDMA 238

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
                +E I   +   R       EA         +   D++  Q +     S +   + 
Sbjct: 239 REGSRKEEITAAEAQYRQALAAVKEAQAGAGKVAVQ-QEDVKAAQASVEQAQSAVKAAQS 297

Query: 286 TREQKTILSPIAG 298
           T EQ    S +AG
Sbjct: 298 TVEQAQ--SAVAG 308


>gi|242237931|ref|YP_002986112.1| peptidase M50 [Dickeya dadantii Ech703]
 gi|242129988|gb|ACS84290.1| peptidase M50 [Dickeya dadantii Ech703]
          Length = 701

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 64/166 (38%), Gaps = 16/166 (9%)

Query: 6   WKNLKRNHPASLKRMTLL-SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           W      HPA+L R  L  ++I I  L  W   + I   + +        NV  + +P  
Sbjct: 403 WSMRNAAHPANLLRSVLAGALILIFLLFPWRGSIRIPAVLEAE-------NVSVLYAPIP 455

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
             +K   V +G  +  G  LL     +    I ++++ I  L+  +    +A     ++ 
Sbjct: 456 AQVKALHVVDGQSVKAGDVLLELTSADVDYRIAIERLQIAVLQQRLQR-GAARQETASET 514

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            V+++       QL + L +Y    ++     I +    L   +TR
Sbjct: 515 QVIDR-------QLAESLARYRGLVAQQQRLSIVAPQAGLVRDVTR 553



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 43/99 (43%), Gaps = 1/99 (1%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              LEL     + +  +  +     +  L+     +E + + +   R  A+ +++   L 
Sbjct: 473 DVLLELTSADVDYRIAIERLQIAVLQQRLQRGAARQETASETQVIDRQLAESLARYRGLV 532

Query: 285 KTREQKTILSPIAGTIVYN-QSFSSSNYAQQSQPLMKIV 322
             +++ +I++P AG +    +  ++  +     PL+++V
Sbjct: 533 AQQQRLSIVAPQAGLVRDVTRDMTAGRWLTADMPLLRVV 571


>gi|169596554|ref|XP_001791701.1| hypothetical protein SNOG_01042 [Phaeosphaeria nodorum SN15]
 gi|160701338|gb|EAT92537.2| hypothetical protein SNOG_01042 [Phaeosphaeria nodorum SN15]
          Length = 1846

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 82/206 (39%), Gaps = 19/206 (9%)

Query: 81   GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
            G      +D++     D K  +  +L+  +   +SA           +    +++ ++ D
Sbjct: 942  GDLQAHLDDLK-----DEKIAAENSLKGQLKQHQSA----------KQLEVAAKDREIAD 986

Query: 141  FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
               K +   +++   G  S  + L+++L +      +   LE+ ++ ++ +   +++ L 
Sbjct: 987  ITKKANDLSAEIAEQGQRS--QQLEVQLEQKTGELSSH--LESHAAEVQRIGDINEQQLI 1042

Query: 201  MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             +++L E     + +LN   R   K  ++   +    +  ++ + +  D+ +        
Sbjct: 1043 QIQSLNESAEKDKTELNSLARENEKLQIQADGDAAAVQAEIQRLEQTVDKTDAMLTALRD 1102

Query: 261  EISRDLEQNQRTFADEMSKLTILEKT 286
            E+    ++ ++   +   +  + E+ 
Sbjct: 1103 ELHASTQEKEQAVMELEEQRMVDEQE 1128



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 70/209 (33%), Gaps = 8/209 (3%)

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L+    I       ++ +  KN R    ++  A+ +L ++ +  +   ++ + QL    
Sbjct: 129 VLVALVGIGA-AFTSIEYLRRKNAR-RALSDDDAIAWLQSQINNAKADIQTLDNQLQTAQ 186

Query: 143 GKYHSTCSKVF-----NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           G   +  +++           ++   L+   T  +++      ++  +  L   L S Q 
Sbjct: 187 GINQTLSTRLQSLQSVQTNSQTLADQLQSVQTNSQTLSAQLQSVQTHNQTLSIQLQSVQT 246

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +   + N  +            ER    S   L+  +   + +         E  L    
Sbjct: 247 NSQTLANQLQGVQADLMTSQASERSCQNSIRALQTRLDLVRTVELAEANQQLENTLREKE 306

Query: 258 YLKEISRDLEQN-QRTFADEMSKLTILEK 285
           Y+ E  R L ++ Q    D  + L   + 
Sbjct: 307 YINEALRQLAEDHQAALRDHQTSLKREQD 335


>gi|157146571|ref|YP_001453890.1| hypothetical protein CKO_02332 [Citrobacter koseri ATCC BAA-895]
 gi|166227718|sp|A8AIZ1|Y2332_CITK8 RecName: Full=UPF0194 membrane protein CKO_02332; Flags: Precursor
 gi|157083776|gb|ABV13454.1| hypothetical protein CKO_02332 [Citrobacter koseri ATCC BAA-895]
          Length = 331

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 79/207 (38%), Gaps = 17/207 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN   +Q+ +    T+    ++   ++           A  + + Y      +D+ Q +
Sbjct: 126 AQNFYQRQQGLWKSRTISAN-DLENARSSRDQAQAQLKSAQDKLSQYRTGNRQQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 185 ASLEQAQAQLAQSELDLQDTTLIAPSDGTLLT-RAVEPGSMLNAGSTVLTLS-LTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLSQAQPGREILL---YTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAE 412
            Y + + +TD   +     LR G P  
Sbjct: 300 VYRLRIVVTDADDA-----LRQGMPVT 321


>gi|114331976|ref|YP_748198.1| RND family efflux transporter MFP subunit [Nitrosomonas eutropha
           C91]
 gi|114308990|gb|ABI60233.1| efflux transporter, RND family, MFP subunit [Nitrosomonas eutropha
           C91]
          Length = 381

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 65/208 (31%), Gaps = 14/208 (6%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +    ++ L+  +            +    E        + E    L+  +     
Sbjct: 95  LLDAQLQQSEANLKSAQTALSVAINKDRRSRNLVERGFISREAMDESKELLDSARAQVVV 154

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAK 333
             +++       +   I SP++G ++          A   Q   L +I    K   I   
Sbjct: 155 SQAQIARDRTNLDYSIIRSPVSGVVIARNVNIGQTVAANFQTPILFQIARDLKQMQIEIS 214

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    I  +  G T       + D    +F A++++I    + Q+N +     Y VI  +
Sbjct: 215 VVEADIGQIHDGQTMVFTVDAFQDR---EFSAVVKQIRLNPTIQENVVT----YSVIATV 267

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                 + +  L  G  A V F     +
Sbjct: 268 -----INEDGSLLPGMTANVRFIVNEKS 290



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 72/177 (40%), Gaps = 13/177 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  ++S++G +     +VE+ +  SG + +   +   ++  G  L   +       +   
Sbjct: 45  IARTISANGTLTP-LELVEVGTQISGRVIQLFADFNDEVKTGQILAKLDPALLDAQLQQS 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE------EQLLDFLGKYHSTCSKVF 153
           + ++K+ +  +     A++      +++E+ F SRE      E L     +   + +++ 
Sbjct: 104 EANLKSAQTALSV---AINKDRRSRNLVERGFISREAMDESKELLDSARAQVVVSQAQIA 160

Query: 154 NYGIS---SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +   S+ RS    +   R++ + +    N  + +   ++   K + +  ++ E
Sbjct: 161 RDRTNLDYSIIRSPVSGVVIARNVNIGQTVAANFQTPILFQIARDLKQMQIEISVVE 217


>gi|324993176|gb|EGC25096.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK405]
 gi|327461446|gb|EGF07777.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK1]
 gi|327473751|gb|EGF19169.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK408]
 gi|327489301|gb|EGF21094.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK1058]
          Length = 421

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL              ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYATEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNALKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADNEVTTAQIEAEKAQVTAQTES 208


>gi|324990914|gb|EGC22849.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           sanguinis SK353]
          Length = 421

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL              ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYATEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNALKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADSEVTTAQIEAEKAQVTAQTES 208


>gi|303252835|ref|ZP_07338994.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247825|ref|ZP_07529861.1| hypothetical protein appser2_8140 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|302648265|gb|EFL78462.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306855627|gb|EFM87794.1| hypothetical protein appser2_8140 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 353

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 106/324 (32%), Gaps = 32/324 (9%)

Query: 103 IKNLRCHIDTEKSALDFL----NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           I ++   I+ E+  +  L      +  + E    S+ + L+        +        I+
Sbjct: 33  IASVNGRIEVERLDIASLYAGRVEEIYIQEGQDVSKNQPLVRLSSSQSQSQVNSAQAQIA 92

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +   S+     + R           + +  +   +  + +L+  KNL   N +S ++L +
Sbjct: 93  AAEASVNNAQAQKRRATEAVSRANAEIAAQQQKANIAKLELSNAKNLHRDNLISSSELER 152

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           ++     S   +      +      I +                   + Q + T     +
Sbjct: 153 RQANYKASLAAVETAKAAKAEAQATITQAQ---------------ATISQAEATVNQAKA 197

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                +   +   I +P+ G I   +     +       ++ ++  +   Y+   +   Q
Sbjct: 198 FAEQADSQNDDMLIRAPLDGRI-EYKIAMLGSVVGIGGKVVSLL-DTSTVYLNVFLPAHQ 255

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKI 393
              V+    A ++      +    F A +  +         S + +  +++  +++ L+I
Sbjct: 256 SNLVRLNDEARIKIDGSDIV----FPAKVVFVASEAQFTPKSVETSEERSKLMFKIKLQI 311

Query: 394 -TDLAFSDNNIELRNGFPAEVLFT 416
            TD+A    N+ L+ G  A     
Sbjct: 312 PTDIAIQHKNL-LKGGMTAMGYVK 334


>gi|218534607|ref|YP_002401137.1| Putative type I secretion membrane-fusion protein EtsA [Escherichia
           coli S88]
 gi|218349811|emb|CAQ87208.1| Putative type I secretion membrane-fusion protein EtsA [Escherichia
           coli S88]
          Length = 402

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 34/278 (12%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK-NAVSQ-NDLNQQERIVYK 225
           L   R   + R+++  + S     L   Q D      L  + + + Q NDL   E  + +
Sbjct: 59  LATGRIDAIERVNVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQCNDLRNAEAALNE 118

Query: 226 STLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              EL+      K               N       +     L   +       +KL   
Sbjct: 119 VKAELQSKQALLKQAELRFKRQLRMLRENASSHEDFESAEAMLATTRAELHSLNAKLVQA 178

Query: 284 EKT-------REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKV 334
           +          E   +++P+ G ++             +Q    I+  +   +  I+A++
Sbjct: 179 QIEVDKKKLALEYTRVVAPMDGIVIAI-VTQQGQTVNSNQSAPTIIKLARLDVMTIKAQI 237

Query: 335 TPKQIQHVKKGYTATVRFPHYA------DIREKKFKAIIEKIDPIISQQDNNLQTQE--- 385
           +   I  +  G  A  RF  ++          +  +   E +    S   N   +     
Sbjct: 238 SEADITRISVGQKA--RFSIFSEPDKHYSATLRAVELAPESVMKDDSLASNTSASGSGTS 295

Query: 386 ----YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               YY  +  + +     N + +     A+V      
Sbjct: 296 NASVYYNALFDVPNPE---NRLRIA--MTAQVTLITDE 328



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 62/142 (43%), Gaps = 11/142 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G I   + V  + +  SG +K  +V+ G  + +G  +   +D+   + +   
Sbjct: 54  IENSVLATGRIDAIERV-NVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQCNDLRNA 112

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVL----------EKAFESREEQLLDFLGKYHSTC 149
           + ++  ++  + ++++ L     ++              + FES E  L     + HS  
Sbjct: 113 EAALNEVKAELQSKQALLKQAELRFKRQLRMLRENASSHEDFESAEAMLATTRAELHSLN 172

Query: 150 SKVFNYGISSVYRSLKMKLTRM 171
           +K+    I    + L ++ TR+
Sbjct: 173 AKLVQAQIEVDKKKLALEYTRV 194


>gi|119896903|ref|YP_932116.1| periplasmic component of efflux system [Azoarcus sp. BH72]
 gi|119669316|emb|CAL93229.1| periplasmic component of efflux system [Azoarcus sp. BH72]
          Length = 383

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 54/138 (39%), Gaps = 6/138 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE  V+++G +   + V ++ +  SG +KK  VE GS +  G  L   +       +D  
Sbjct: 21  IEDVVTATGTLQPREYV-DVGAQVSGQLKKIHVEVGSLVKNGDLLGEIDSTVYLSKVDAS 79

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYD-----VLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           +  ++NLR  +   ++ +     ++      + E A  +   Q  +   K      +   
Sbjct: 80  RAQLRNLRAQLKEREAQVALAQVQFKRQTALMAEDATTTETLQTAEATLKSAEAQLEALR 139

Query: 155 YGISSVYRSLKMKLTRMR 172
             I     +L+     ++
Sbjct: 140 AQIEQYESTLRGDEANLQ 157



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 48/139 (34%), Gaps = 3/139 (2%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q    + +    ++ + L +   +++  L   +    E        LK     LE  + 
Sbjct: 81  AQLRNLRAQLKEREAQVALAQVQFKRQTALMAEDATTTETLQTAEATLKSAEAQLEALRA 140

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPHSKLTY 329
                 S L   E   +   I+SP+ GT+V   +         +Q    I  V       
Sbjct: 141 QIEQYESTLRGDEANLQYARIMSPMTGTVVSITAR-QGQTLNTNQSAPTILRVADLTTMT 199

Query: 330 IRAKVTPKQIQHVKKGYTA 348
           ++ +V+   +  +K G  A
Sbjct: 200 VQTQVSEADVSRLKLGMAA 218


>gi|187479403|ref|YP_787428.1| multidrug efflux system inner membrane protein [Bordetella avium
           197N]
 gi|115423990|emb|CAJ50543.1| multidrug efflux system inner membrane protein [Bordetella avium
           197N]
          Length = 355

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL-ELR 231
            + + +++    +  L A+ S    +  +++       + Q D  + E +     L  L 
Sbjct: 44  RVEVAKVEERPFARKLAAVGSLRSDESVVLRPEVA-GRIQQIDFKEGESVNADQVLIRLD 102

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM----SKLTILEKTR 287
           + I   +      N    E+    A  L+      +Q +   +  +    +   + +   
Sbjct: 103 DAIQNAELRQAKANLALAESQHRRAVDLQGRGFVSQQARDEASSNLKVQQAAAALAQARL 162

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKG 345
           ++ TI +P AG +   ++ S  +Y  Q Q L    P        +  +V    +  ++ G
Sbjct: 163 DKMTIRAPFAGMV-GLRNVSVGDYVNQGQDLA---PLEAIDPLKVDFRVPEMYLNKLRVG 218

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
               VR         ++    +  + P++     ++         +K TD         L
Sbjct: 219 QKLDVRLDALP---GEERSGEVYAVSPLVDAGGRSILL----RATVKNTDKV-------L 264

Query: 406 RNGFPAEVLFTAKN 419
           R G  A V      
Sbjct: 265 RPGMFARVQLQFGE 278



 Score = 40.0 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 13/116 (11%), Positives = 37/116 (31%), Gaps = 4/116 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I++   + G  +     L+  +D      +   K ++       +++      L  + 
Sbjct: 79  GRIQQIDFKEGESVNADQVLIRLDDAIQNAELRQAKANL----ALAESQHRRAVDLQGRG 134

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
            V ++A +     L           +++    I + +  +          Y+N+  
Sbjct: 135 FVSQQARDEASSNLKVQQAAAALAQARLDKMTIRAPFAGMVGLRNVSVGDYVNQGQ 190


>gi|70730162|ref|YP_259901.1| membrane fusion protein [Pseudomonas fluorescens Pf-5]
 gi|55820065|gb|AAV66098.1| PltI [Pseudomonas fluorescens Pf-5]
 gi|68344461|gb|AAY92067.1| membrane fusion protein, putative [Pseudomonas fluorescens Pf-5]
          Length = 337

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/323 (16%), Positives = 109/323 (33%), Gaps = 27/323 (8%)

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            K+     L  ++D  + +L F  ++      A E    Q    L +  +   ++     
Sbjct: 27  EKQNDHLKLHGNVDIRQVSLAFDGSERIAALYAEEGDLVQPGQVLAELDTRTLRLEINRS 86

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            +   + +  L R+++    + ++E   +   A  +  Q     M+ L      +Q    
Sbjct: 87  KARIGAQEQALLRLKNGTRPQ-EVEQSKARFDAAQAQMQLAQLHMQRLRRIADDTQGKGV 145

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            Q+R        L +     +       E  +   L       E   D+ Q         
Sbjct: 146 SQQR--------LDQAAARLQVAKAQSQEQRESWTLAKIGPRNE---DIAQATADLQASR 194

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + L +LE    +  + +P    I   +     + A   +P+  +   +   ++RA V  +
Sbjct: 195 ADLDLLEHYLARAQLKAPTQARI-RTRLLEPGDMASPQRPVFALA-LTDPKWVRAYVNER 252

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILK 392
           Q+ H++    A V    + D         +  I  +      S +  +L+T   YE+ + 
Sbjct: 253 QLGHIRADQMARVYTDSFPDQ---AIDGKVGYISSVAEFTPKSVETEDLRTSLVYEIRVL 309

Query: 393 ITDLAFSDNNIELRNGFPAEVLF 415
           +      D +  LR G PA V  
Sbjct: 310 V-----KDPDDRLRLGMPATVYL 327



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/297 (10%), Positives = 76/297 (25%), Gaps = 15/297 (5%)

Query: 56  VVEIKSPFSG-IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
                +      I     E G  +  G  L   +       I+  K  I      +   K
Sbjct: 42  RQVSLAFDGSERIAALYAEEGDLVQPGQVLAELDTRTLRLEINRSKARIGAQEQALLRLK 101

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +       + +  +  F++ + Q+               +     V +    +      +
Sbjct: 102 NG--TRPQEVEQSKARFDAAQAQMQLAQLHMQRLRRIADDTQGKGVSQQRLDQAAARLQV 159

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              +   + +S  L  +   ++       +L    A    DL +      +     +  I
Sbjct: 160 AKAQSQEQRESWTLAKIGPRNEDIAQATADLQASRA--DLDLLEHYLARAQLKAPTQARI 217

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             +      +               K +   + + Q           +   +   + I  
Sbjct: 218 RTRLLEPGDMASPQRPVFALALTDPKWVRAYVNERQLGHIRADQMARVYTDSFPDQAIDG 277

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATV 350
            + G I     F+  +   +++ L              +V  K     ++ G  ATV
Sbjct: 278 KV-GYISSVAEFTPKSV--ETEDL------RTSLVYEIRVLVKDPDDRLRLGMPATV 325


>gi|294673089|ref|YP_003573705.1| RND family efflux transporter MFP subunit [Prevotella ruminicola
           23]
 gi|294472075|gb|ADE81464.1| efflux transporter, RND family, MFP subunit [Prevotella ruminicola
           23]
          Length = 380

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 59/164 (35%), Gaps = 8/164 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           ++   SG + K  V+ G+ + +G PL   +       +D  K  +   R  + + +  LD
Sbjct: 64  VRPLVSGRLVKILVKEGAHVKKGQPLFVIDQSPYIAAVDAAKAQVSTARVALSSAQLNLD 123

Query: 119 ---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
               L  +  V E           +   +  +  +++ +      Y ++   +     + 
Sbjct: 124 GKEKLYAQKMVGESDLLRARHAKEEAYSQLEAALAELESARTQLDYTTICSPVDGTIGMI 183

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             R+       L+     +H   ++   NL    A+S+  L++ 
Sbjct: 184 EYRVG-----DLVETDGENHMVIVSDNNNLHAYGALSEETLSEL 222



 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 53/173 (30%), Gaps = 13/173 (7%)

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA----------VSQNDL 216
            L   R       +   K   L ++         ++K L ++ A          + Q+  
Sbjct: 38  LLRVQRQDITLTRNFIVKMESLHSIYVRPLVSGRLVKILVKEGAHVKKGQPLFVIDQSPY 97

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
                         R  +   +  L    +LY +  +  ++ L+      E+        
Sbjct: 98  IAAVDAAKAQVSTARVALSSAQLNLDGKEKLYAQKMVGESDLLR-ARHAKEEAYSQLEAA 156

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-SQPLMKIVPHSKLT 328
           +++L       +  TI SP+ GTI     +   +  +   +  M IV  +   
Sbjct: 157 LAELESARTQLDYTTICSPVDGTI-GMIEYRVGDLVETDGENHMVIVSDNNNL 208


>gi|256020834|ref|ZP_05434699.1| putative HlyD family secretion protein [Shigella sp. D9]
 gi|293453790|ref|ZP_06664209.1| HlyD family secretion protein [Escherichia coli B088]
 gi|300815308|ref|ZP_07095533.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 107-1]
 gi|300907364|ref|ZP_07125012.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 84-1]
 gi|301305976|ref|ZP_07212057.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 124-1]
 gi|332282042|ref|ZP_08394455.1| conserved hypothetical protein [Shigella sp. D9]
 gi|291321916|gb|EFE61347.1| HlyD family secretion protein [Escherichia coli B088]
 gi|300400873|gb|EFJ84411.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 84-1]
 gi|300532200|gb|EFK53262.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 107-1]
 gi|300838759|gb|EFK66519.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 124-1]
 gi|315256083|gb|EFU36051.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 85-1]
 gi|323182950|gb|EFZ68351.1| hlyD family secretion family protein [Escherichia coli 1357]
 gi|332104394|gb|EGJ07740.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 355

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAHRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|254446548|ref|ZP_05060024.1| efflux transporter, RND family, MFP subunit, putative
           [Verrucomicrobiae bacterium DG1235]
 gi|198260856|gb|EDY85164.1| efflux transporter, RND family, MFP subunit, putative
           [Verrucomicrobiae bacterium DG1235]
          Length = 531

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 77/247 (31%), Gaps = 25/247 (10%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           I L   D+  K      L+  H  ++       +   +S        +  +     L++ 
Sbjct: 230 IRLVHKDVGEKVEAGEPLVELHSAEVAA----AKSAYLSAVVELDIRKQSFDRETRLQKQ 285

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +  L      Y +A L  +N  + +      N     DE++++   + T  Q  + 
Sbjct: 286 SVTSEKELLEAQANYRKAKLAASNLRQRLL-----NLGLEDDEIARVENEQDTSAQLIVC 340

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P +GT+V  +S       +   PL  +   S        V    +  ++ G        
Sbjct: 341 APFSGTLVDRKSV-MGEAVEAGHPLFTLADLSTRWL-EISVPSDHVGQLQVGQPVE---A 395

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            + ++   +    I  +D  I      +           IT+ A      +L +G   ++
Sbjct: 396 AFPELPGARVTGRITWVDTSIDPDTRMI------RARALITENA-----EQLTSGLFGKI 444

Query: 414 LFTAKNT 420
                  
Sbjct: 445 YIATGQK 451



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 9/125 (7%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           ++     G+I+    + G ++  G PL+     E        K +  +    +D  K + 
Sbjct: 221 KVTPLVGGVIRLVHKDVGEKVEAGEPLVELHSAEVAA----AKSAYLSAVVELDIRKQSF 276

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL-KMKLTRMRSIYL 176
           D    +   L+K   + E++LL+    Y        N     +   L   ++ R+ +   
Sbjct: 277 D----RETRLQKQSVTSEKELLEAQANYRKAKLAASNLRQRLLNLGLEDDEIARVENEQD 332

Query: 177 NRLDL 181
               L
Sbjct: 333 TSAQL 337


>gi|170721259|ref|YP_001748947.1| secretion protein HlyD family protein [Pseudomonas putida W619]
 gi|169759262|gb|ACA72578.1| secretion protein HlyD family protein [Pseudomonas putida W619]
          Length = 397

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 68/205 (33%), Gaps = 22/205 (10%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           + ++R +Y N   L+ +    +A L   +++    K L +  A++               
Sbjct: 112 VRQVRGLYSNVDSLKAQLQTRQAELQKARQNYNRRKVLADSGAIA--------------- 156

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
               E I   ++ L       + A  +       +   +  +        + L       
Sbjct: 157 ---AEEISHARDDLTVAQAAVNSARQQLNTSTALVDDTVVSSHPEVMAAAADLRQAYLDH 213

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            + T+++P+ G +   ++       Q     M ++P  +  +I A     Q++ ++ G  
Sbjct: 214 ARTTLVAPVTGYVAK-RTVQLGQRLQPGTATMAVIPLDE-VWIDANFKETQLRDMRIGQP 271

Query: 348 ATVRFPHYADIREKKFKAIIEKIDP 372
             +    Y      K+   ++ +  
Sbjct: 272 VEISADLYGSDV--KYSGTVDSLGA 294



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 16/128 (12%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED--------------IETTDLID 97
              NVVEI    +G +     ++G  +  G  LL F+                 T   + 
Sbjct: 57  VNGNVVEITPLVTGTVISIGADDGDLVHAGQVLLQFDPADSEVALQAAQAKLARTVRQVR 116

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
               ++ +L+  + T ++ L      Y+  +   +S      +           V    +
Sbjct: 117 GLYSNVDSLKAQLQTRQAELQKARQNYNRRKVLADSGAIAAEEISHARDDLT--VAQAAV 174

Query: 158 SSVYRSLK 165
           +S  + L 
Sbjct: 175 NSARQQLN 182


>gi|312115467|ref|YP_004013063.1| efflux transporter RND family, MFP subunit [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220596|gb|ADP71964.1| efflux transporter, RND family, MFP subunit [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 324

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/243 (11%), Positives = 73/243 (30%), Gaps = 35/243 (14%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + D  +    + ++   L              +   +   +  +    E + + +   + 
Sbjct: 86  RIDPERFRLALAQADAVLEGRKAALDLASSDYDRYRNMTEIAVSRQKVEAAFEAKLTAKA 145

Query: 273 FADE-MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             D+ ++   + +   E+ T+ +P+ G +V         Y    Q +  ++       + 
Sbjct: 146 AYDQAIADKAVAKLNLERSTVRAPVNGRVVNVSLL-PGAYVATGQGVFALL-DEDSLRVE 203

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT------QE 385
                 ++  +  G  A VR          +    +E I   +  ++ +  +        
Sbjct: 204 GYFEETKLGRIHVGDRARVRL----MGESAELMGRVESIAAGVEDRERSAGSKLLPNVNP 259

Query: 386 YY---------EVILKITDLAFSDNNIELRNGFPAEVLFTAK----------NTTLAQEI 426
            +          V + + + A  D    L +G  A V                ++L Q I
Sbjct: 260 TFSWVRLAMRVPVRIALDNAADRDK---LVSGRTATVFIENGTLKKWAPFQWESSLLQRI 316

Query: 427 IHP 429
            +P
Sbjct: 317 ANP 319



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 92/255 (36%), Gaps = 21/255 (8%)

Query: 10  KRNHPASLKRMTLLSIIG---IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K + P  L+ +  L++ G   +IG   W     I+   +  G +  +  VV +     G+
Sbjct: 11  KTSAPFLLRFLVTLAMTGAALLIGASLWYYY--IDAPWTRDGRVRAD--VVAVAPDVPGL 66

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V +  ++ +G  L   +       +      ++  +  +D   S  D   N  ++
Sbjct: 67  VTEVLVTDNKRVKRGDVLFRIDPERFRLALAQADAVLEGRKAALDLASSDYDRYRNMTEI 126

Query: 127 ------LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                 +E AFE++      +            N   S+V   +  ++  +  +    + 
Sbjct: 127 AVSRQKVEAAFEAKLTAKAAYDQAIADKAVAKLNLERSTVRAPVNGRVVNVSLLPGAYV- 185

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
                +  + + +   +D   ++  FE+  + +  +  + R+  +   E  E +   +++
Sbjct: 186 -----ATGQGVFALLDEDSLRVEGYFEETKLGRIHVGDRARV--RLMGESAELMGRVESI 238

Query: 241 LRHINELYDEANLEF 255
              + +    A  + 
Sbjct: 239 AAGVEDRERSAGSKL 253


>gi|147679017|ref|YP_001213232.1| membrane-fusion protein [Pelotomaculum thermopropionicum SI]
 gi|146275114|dbj|BAF60863.1| membrane-fusion protein [Pelotomaculum thermopropionicum SI]
          Length = 373

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 59/197 (29%), Gaps = 23/197 (11%)

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANY------LKEISRDLEQNQRTFADEMSKLT 281
           L+ R+ + + +     I+ LY    +  A +      L      L+  +       + L 
Sbjct: 113 LKARQALADAERNYSRISALYQAQAVSRAQFEEAESALSNARLGLQLAEEQLRQAEAALA 172

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
              +     T+ SPIAG +      S    A      + +V +     ++  V+   I  
Sbjct: 173 GARENLANHTVTSPIAGHVAAVNVHS-GEMAGPQGAAVTVV-NMDTVKVKVNVSENVISS 230

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           ++KG    V       +  K     +  + P           + +             + 
Sbjct: 231 IQKGSQVQVSI----GVLGKTVTGTVVSVGPKSDPATRAFPVEIF-----------LDNA 275

Query: 402 NIELRNGFPAEVLFTAK 418
             E+R G  A +     
Sbjct: 276 QGEIRPGMVATLKIPVG 292



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 51/144 (35%), Gaps = 2/144 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  +   + ++GE++  +   ++    SG +    V  G ++ +G  LL  E  E  +
Sbjct: 38  AAVKDLSSILDATGEVIASEEA-DVAPKVSGRVSTVNVSVGDRVARGQALLVLESSEARN 96

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   + +      ++   + AL      Y  +   ++++      F     +  +    
Sbjct: 97  SVAQAEAAAGTAGVNVLKARQALADAERNYSRISALYQAQAVSRAQFEEAESALSNARLG 156

Query: 155 YGISSVY-RSLKMKLTRMRSIYLN 177
             ++    R  +  L   R    N
Sbjct: 157 LQLAEEQLRQAEAALAGARENLAN 180


>gi|95108227|emb|CAD18614.2| putative abc transporter related protein [Ralstonia solanacearum
           GMI1000]
          Length = 452

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/250 (12%), Positives = 78/250 (31%), Gaps = 32/250 (12%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               ++    I+S+     +   +             +    +  L++ Q+     + L+
Sbjct: 105 ELKRQLREAEIASIQAQQALSAAQQIESSTEYQAAARRLLAAQNSLAAAQRRGKEAQMLY 164

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +K  +++ +L+  ++ +     ++     E   +                  LK     L
Sbjct: 165 DKGIIARTELDAGKQEIDTGQSQVDGARDEIATL-----------------RLKRAPAAL 207

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV-----------YNQSFSSSNYAQQS 315
              +    +   +L  L    +  T+LSPI+G ++             +  ++       
Sbjct: 208 RVLELDLENRQLRLEELRAKLKATTLLSPISGVVLYPEPTDGNDPSGRKELNAGAAVTPK 267

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             ++  V  +    I+A V  + I+ V  G    +     +D     F   ++++     
Sbjct: 268 DVILT-VGDTSAFLIKAWVDEEDIRRVAPGQAVRIVLGADSDR---AFAGTVQRVSSQAR 323

Query: 376 QQDNNLQTQE 385
             D   Q   
Sbjct: 324 AADGRGQGSR 333


>gi|16264124|ref|NP_436916.1| hypothetical protein SM_b20390 [Sinorhizobium meliloti 1021]
 gi|15140249|emb|CAC48776.1| HYPOTHETICAL PROTEIN SM_b20390 [Sinorhizobium meliloti 1021]
          Length = 410

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 119/356 (33%), Gaps = 27/356 (7%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET-TDLIDLKKVSIKNLRCH 109
                +  I +P  G I+K     G+ + +G  L T  +      ++   +   +     
Sbjct: 37  TVNARLAVINAPIDGEIEKPAPRIGTPVAEGETLATIRNQRVNRAILASLRTDHRTAVER 96

Query: 110 IDTEKSALDFLNNKYDVLEKAFES-REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           +   +   D L    D L    +  R   +     +      +V       V        
Sbjct: 97  VAALRRERDELARLRDDLAGRLDIFRNATIASLEREVQILQKRVEVSRAQDVVA------ 150

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
              R   + R DLE+K    R ++ + Q          E + ++  +L QQ     +  +
Sbjct: 151 ---RVDLVRRQDLESKGIFTRKMVEAAQAAGAAAGGELEISNLT-VELLQQRLNAVRQGI 206

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFAN---YLKEISRDLEQNQRTFADEMSKLTILEK 285
            L   + + +N + +  +  DE  +   +    + E     +Q  +  A+E  ++  LE 
Sbjct: 207 FL---VGDGQNDVPYSRQRQDEVIVRIHDLNTRIAENEARAKQTDQQIAEEERRVLSLE- 262

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                TI SP  G +      S SN    ++ +M+I+   +  ++   V       +  G
Sbjct: 263 ---AATIPSPFDGVVWSRNVISGSNVVLNNE-MMRIL-DCRELFVDILVPEVDYDEIYPG 317

Query: 346 YTATVRFPHYADIREKKFKAIIEK---IDPIISQQDNNLQTQEYYEVILKITDLAF 398
             A VR     D+   + +A+      ++      +     +    + + +   A 
Sbjct: 318 REAEVRLFGRGDVFRGRVQAVKGSSAVVEKDSLAANEPETEERNARIRVTLAPSAL 373


>gi|319942023|ref|ZP_08016342.1| hypothetical protein HMPREF9464_01561 [Sutterella wadsworthensis
           3_1_45B]
 gi|319804407|gb|EFW01285.1| hypothetical protein HMPREF9464_01561 [Sutterella wadsworthensis
           3_1_45B]
          Length = 377

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/356 (12%), Positives = 103/356 (28%), Gaps = 48/356 (13%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    +E G  +  G  LL  +  +    I   +  I      I  E+  +     +
Sbjct: 62  SGRLVDRPIEEGMTVEAGAKLLAIDGTDIGLSIRQTEALIHQADAQIAAEEEGIRLALAE 121

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +  E                              +++R ++      +S     L  E 
Sbjct: 122 ANTEE-----------------------------QTLWRQIEASEAARKSASAEWLRAEA 152

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                + LL       +    L      ++  L+  ER +  + +  RE   ++ +    
Sbjct: 153 DWKRAQRLLPQGALAQSDFDALKAAAVSAREGLSSAERALDAACVGAREEDRQKLSHTGS 212

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              +  +A +      +     LE  +       + L  L+  + + T+ +P    ++  
Sbjct: 213 AEGMRLDAVVNARQAAENRRISLESLKAGREASAAALEQLKVNQSRLTLKAPEKAKVLEV 272

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             +        + P + +   S+  Y  + V   +++  ++G   T   P          
Sbjct: 273 L-YEKGELVSPNAPAVLL--ESERLYFDSYVAENKVKGFQEGAKVTCWSPALNQN----V 325

Query: 364 KAIIEKIDPIIS------QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +  +  +            ++        ++V + +           L  G   EV
Sbjct: 326 RGTVLSVTAAPDFADLKMVRERGQADLTLFKVRINVEPAE------GLLTGMTLEV 375


>gi|239993569|ref|ZP_04714093.1| ABC export system, membrane fusion protein [Alteromonas macleodii
           ATCC 27126]
          Length = 411

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 65/184 (35%), Gaps = 17/184 (9%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLP--------------IEISVSSSGE 49
           +    LK   P  +  + ++  +    +  W                   IE+++ S+G+
Sbjct: 15  YGSNALKLPLPIKVLLIAIIVFVPAYAVYAWLYSPQTNTEYLFQDAKIRDIELNLVSTGQ 74

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +  +  V E+ +  SG +    VE G  + +G  L+  +       +   + ++ + +  
Sbjct: 75  LEPKRYV-EVGAQVSGQVDNIHVEEGDIVKEGDLLVEIDARVFETQVQNSQAALDSKKAQ 133

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +   ++  +    +    +  F  ++  +   +     T  KV +  I++    +K    
Sbjct: 134 LAQLRAERELAEVRAQRNQNLF--KQNAVSQDVVVSSDTNLKVIDTKITASIAQIKADEA 191

Query: 170 RMRS 173
            +  
Sbjct: 192 SLEG 195



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 101/299 (33%), Gaps = 51/299 (17%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           L +   +  K +     Q+   +   H     +   G   V    ++  T++++      
Sbjct: 69  LVSTGQLEPKRYVEVGAQVSGQVDNIHVEEGDIVKEGDLLVEIDARVFETQVQNSQAALD 128

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             + + + LRA     +      +NLF++NAVSQ+ +   +  +     ++  +I + K 
Sbjct: 129 SKKAQLAQLRAERELAEVRAQRNQNLFKQNAVSQDVVVSSDTNLKVIDTKITASIAQIKA 188

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               +     +                                         I +PI+GT
Sbjct: 189 DEASLEGDITK------------------------------------LGFAKIFAPISGT 212

Query: 300 IVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           +              +Q  P++  +    +  +RA+V+   +Q +K+G      F    D
Sbjct: 213 VATLPVR-EGQTLNANQNAPVLLQISDLSVMTLRAEVSEADVQKIKRGMPVY--FSTLGD 269

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   + + + ++ P  +  ++ +     Y+V++ + +   +  +         +V F 
Sbjct: 270 NKT-FYHSTVRQVLPTPTVLNDVVL----YQVLIDVENPDRTLMDA-----MTTQVFFV 318


>gi|167764458|ref|ZP_02436579.1| hypothetical protein BACSTE_02842 [Bacteroides stercoris ATCC
           43183]
 gi|167697127|gb|EDS13706.1| hypothetical protein BACSTE_02842 [Bacteroides stercoris ATCC
           43183]
          Length = 355

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 7/79 (8%)

Query: 41  EISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +  VS+ G+  +     V   +        SG I+K  V++G+++  G  L   +  +  
Sbjct: 35  DTVVSAGGQTSLQYPGKVKAAQDISLAFRVSGTIQKIYVKDGARVQAGQLLAELDPTDYQ 94

Query: 94  DLIDLKKVSIKNLRCHIDT 112
             +D  +   K ++   + 
Sbjct: 95  VQLDATEAEYKQIKAEAER 113


>gi|116052733|ref|YP_793050.1| hypothetical protein PA14_60760 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115587954|gb|ABJ13969.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 425

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 52/390 (13%), Positives = 113/390 (28%), Gaps = 90/390 (23%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P+   +   G +     VV + +PF+G ++   VE G ++ +G  LL  +  E    + 
Sbjct: 50  APLVHQIGLVGRLEP-GRVVTLAAPFAGNVEALLVEPGQRVAEGQELLRMDTREIAVQVR 108

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   R  +   +                                           
Sbjct: 109 EAQSALLKARRTLQDLRDW----------------------------------------- 127

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                 +      +RS  L +   E K    R L          + +L ++ +  + DL 
Sbjct: 128 -ERGEDMARVRRALRSAQLAQSSTERKLRETRELFQRGIVPRNELDDLEQQASQQRMDLE 186

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
              R V  +  + +    +   M                        DL      +    
Sbjct: 187 AARREVESTRAKGQGENRQIAEM------------------------DLANASVKYETLQ 222

Query: 278 SKLTILEKTREQKTILSPIAGTIVYN----------QSFSSSNYAQQSQPLMKIVPHSKL 327
           ++L         +T+ +P AG +V            +   + +   Q Q L  +    + 
Sbjct: 223 AQLDG-------RTVRAPFAGIVVAAPGLAGEQGSREPVQAGSKLGQGQALFGLA-SVER 274

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + AKV+   I  +++G    +    +          +I  +            + ++ 
Sbjct: 275 LKVSAKVSELDINQLREGQAVEISGDGFEGTT---LAGVIAALGGQALPGMAQGGSPQF- 330

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           EV + +  L       ++R G  A++  T 
Sbjct: 331 EVTVSVAPLDPRQLQ-KIRLGMSAKLTVTT 359


>gi|49087008|gb|AAT51404.1| PA5232 [synthetic construct]
          Length = 358

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 83/305 (27%), Gaps = 19/305 (6%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            + L     +  V E  F    E +     +            +     +     + +  
Sbjct: 53  AAKLPGRVAEIKVDEGDFVKAGEIVARMDTQVLEAQLAQAQAQVRQAENAKLTATSLVAQ 112

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               +   +   +  +A L++ QK  T  + L ++NA+ Q  L+     +  +   L   
Sbjct: 113 RESEKSTAQAVVAQRQAELTAAQKRFTRTEALVKRNALPQQQLDDDRATLQSAQAALSAA 172

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +  +    I     +                 + Q       + +  L+   +   + 
Sbjct: 173 RSQVISAQAAIEAGRSQVI---------------EAQSAIEAAKASVARLQADIDDSLLK 217

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G + Y +             L+ +V      Y+   +   Q   V  G    +   
Sbjct: 218 APRNGRVQY-RVAQPGEVLPAGGKLLNMV-DLADVYMTFFLPSMQAGRVGLGQEVRLVID 275

Query: 354 HYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              D       + +  +     +  +  N + +  + V  ++           ++ G P 
Sbjct: 276 AVPDYVIPAKVSYVASVAQFTPKTVETANEREKLMFRVKARLDPALLEKYITYVKTGVPG 335

Query: 412 EVLFT 416
                
Sbjct: 336 MAYLR 340



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 83/228 (36%), Gaps = 10/228 (4%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSG 65
           +K+     L R  +++ +  +G++ W +  P    E   S +G I   +  V++ +   G
Sbjct: 1   MKQESKRWLSRALIVAALLGVGVLVWQVSRPTGLGEGFASGNGRIEATE--VDVAAKLPG 58

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + + +V+ G  +  G  +   +       +   +  ++       T  S +    ++  
Sbjct: 59  RVAEIKVDEGDFVKAGEIVARMDTQVLEAQLAQAQAQVRQAENAKLTATSLVAQRESEKS 118

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             +     R+ +L     ++  T + V    +    + L      ++S         ++ 
Sbjct: 119 TAQAVVAQRQAELTAAQKRFTRTEALVKRNALPQ--QQLDDDRATLQSAQAALSAARSQV 176

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
              +A + + +  +   ++  E    ++  + + +  +  S L+   N
Sbjct: 177 ISAQAAIEAGRSQVIEAQSAIE---AAKASVARLQADIDDSLLKAPRN 221


>gi|83716678|ref|YP_440069.1| multidrug resistance protein [Burkholderia thailandensis E264]
 gi|83650503|gb|ABC34567.1| multidrug resistance protein [Burkholderia thailandensis E264]
          Length = 488

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 9/167 (5%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL---- 266
             + DL   ++          E +  ++      +    +A L  A    E +R L    
Sbjct: 229 AREADLKLAQQAYRARAGASVEVVAPEELARAKSSLANAQAALAGAQAQLEAARALGSER 288

Query: 267 -EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
             +         ++  +  +   + TI+SP+ GT+   +S           PLM +V   
Sbjct: 289 PVEQNPAVQQAAAQFKLAYRNLRRTTIVSPVDGTV-GQRSVQIGQQVGPGVPLMSVV-QL 346

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +  ++ A     QI+H++ G    +    Y       +   +E    
Sbjct: 347 RQVWVEANFKEGQIRHMRVGQPVRLESDLYGARVT--YHGRVEGFSA 391



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 60/180 (33%), Gaps = 12/180 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-------SIK 104
              NVV+I +   G +    V +  Q+  G  L+  +D + +      +         + 
Sbjct: 155 VAGNVVQIAAQIQGTVTDVLVADTQQVKAGQALVKLDDADASAAFAQARAQLAQAVRQVA 214

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           N R  +   +  +        + ++A+ +R    ++ +       +K       +     
Sbjct: 215 NTRLSMGMYEETVKAREADLKLAQQAYRARAGASVEVVAPEELARAKSSLANAQAALAGA 274

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + +L   R++   R   +N +        +  +     +NL     VS  D    +R V 
Sbjct: 275 QAQLEAARALGSERPVEQNPAVQ-----QAAAQFKLAYRNLRRTTIVSPVDGTVGQRSVQ 329


>gi|288573437|ref|ZP_06391794.1| efflux transporter, RND family, MFP subunit [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569178|gb|EFC90735.1| efflux transporter, RND family, MFP subunit [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 433

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 79/281 (28%), Gaps = 42/281 (14%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR--LDLENKSSLLRALLSSHQK 197
           D L +      K       S  R L+ KL  M+S          +   S  +A  +  + 
Sbjct: 97  DLLARIDPRDFKTKLDSAESQLRQLQAKLAEMKSGARAEDLAAAQASVSAAQAQYAEAES 156

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +    K+L+++ AVSQ    Q +     +   LR      K       +           
Sbjct: 157 NYKRFKSLYDQGAVSQVQYEQYKTAYDVARSSLRSAQESLKKARSGARK----------- 205

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI----VYNQSFSSSNYAQ 313
                  +L+Q +     + S +           + +P  G +    V N  F      Q
Sbjct: 206 ------EELQQQEAAIQAQESAVEAARSALSDTELRAPFDGVVADTFVDNHQF-----VQ 254

Query: 314 QSQPLMKIVPHSKLTYIR--AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
             Q ++ +     L  I     V    +  +++     V                +  + 
Sbjct: 255 AKQTILSL---QNLKNIEMVVHVPDGDVVRIREKQIGEVMLSA----TLDAMPGRVFPVT 307

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                   +  TQ  Y+  + +        N+ +  G    
Sbjct: 308 FKEFSTQADPSTQT-YQATVTMP----YPENVTILPGMAVT 343



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 41/145 (28%), Gaps = 1/145 (0%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +     V ++    SG + +F +  G  +  G  L   +  +    +D  +  ++ L
Sbjct: 63  QGTVQASQKV-DLSFRVSGPLVEFPMNKGQAVKNGDLLARIDPRDFKTKLDSAESQLRQL 121

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  +   KS     +        +    +    +   K   +             +    
Sbjct: 122 QAKLAEMKSGARAEDLAAAQASVSAAQAQYAEAESNYKRFKSLYDQGAVSQVQYEQYKTA 181

Query: 167 KLTRMRSIYLNRLDLENKSSLLRAL 191
                 S+   +  L+   S  R  
Sbjct: 182 YDVARSSLRSAQESLKKARSGARKE 206


>gi|238023531|ref|YP_002907763.1| secretion protein HlyD family protein [Burkholderia glumae BGR1]
 gi|237878196|gb|ACR30528.1| Secretion protein HlyD family protein [Burkholderia glumae BGR1]
          Length = 496

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/364 (11%), Positives = 106/364 (29%), Gaps = 72/364 (19%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +  K ++  +L  + +++++ +I  + W +L       +       + N + I    SG 
Sbjct: 149 RKRKGSNRKTLIILAIVAVLLLIVALVWWLLTR-NQVSTDDAY--TDGNAIAIAPHVSGY 205

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V++ + + +G  L+  +  +    +D     +   +  +D  +  LD    +Y  
Sbjct: 206 VTRLNVDDNTYVHRGDLLVQIDPRDYQAQLDAADAQLGLAQAQLDAARVQLDIARVQYPA 265

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                 ++ E       +  +   +       +  +         R+     + +    +
Sbjct: 266 QYAQARAQIESAEAAYQQALAAQQRQHAVDARATSKQAIDAADAQRASADANVAMARAQA 325

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              AL+                         QQ R V  +  E R+ +   +        
Sbjct: 326 RTAALVP------------------------QQIRTVESTLEERRQQVLAAR-------- 353

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                                  QR  A                 I +P  G +      
Sbjct: 354 ----------------------AQRETAAL---------NLSYCAIRAPSDGWVTRRNV- 381

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
              ++ Q    L  IV  +   +I A     Q++ ++ G    V    Y ++        
Sbjct: 382 QLGSFLQTGSSLFSIV--TPRIWITANFKESQLERMRIGDRVDVSVDAYPEL---ALHGH 436

Query: 367 IEKI 370
           ++ +
Sbjct: 437 VDSV 440


>gi|255532575|ref|YP_003092947.1| RND family efflux transporter MFP subunit [Pedobacter heparinus DSM
           2366]
 gi|255345559|gb|ACU04885.1| efflux transporter, RND family, MFP subunit [Pedobacter heparinus
           DSM 2366]
          Length = 409

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 2/133 (1%)

Query: 40  IEISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +   V SSG++ +   N  +I     GII++  V  G ++ +G  L+T E+ +    +  
Sbjct: 75  LTEVVKSSGQLAVPPQNAAQINVLSGGIIRRINVIEGQKVKKGQVLVTIEN-QDLIRLQQ 133

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             ++ K    +++ E +    L        KA +  E        K  +   ++  YGIS
Sbjct: 134 DYLTAKGGFSYVEAEYNRQQQLKAANAGTGKAHQQAEANYNAERAKIKALERQLQQYGIS 193

Query: 159 SVYRSLKMKLTRM 171
           +   S     +++
Sbjct: 194 ASRISSGNITSQI 206



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 97/311 (31%), Gaps = 28/311 (9%)

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY-GISSVYRSLKMK 167
              TE++     + + + LE   E      +   G      ++V    G  +V      +
Sbjct: 35  EAKTEEAHEQGGHEESEGLELTQEQLNAVGIVIGGITQKNLTEVVKSSGQLAVPPQNAAQ 94

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           +  +    + R+++     + +  +    ++  +++         Q D    +       
Sbjct: 95  INVLSGGIIRRINVIEGQKVKKGQVLVTIENQDLIRL--------QQDYLTAKGGFSYVE 146

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            E      + K       + + +A   +     +I   LE+  + +    S+++    T 
Sbjct: 147 AEYNRQ-QQLKAANAGTGKAHQQAEANYNAERAKIKA-LERQLQQYGISASRISSGNIT- 203

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            Q  + +PI GTI    + +  +YAQ    +M IV  +   +    V  K +  +K G  
Sbjct: 204 SQIPVTAPINGTIGKINAET-GSYAQPGVSIMDIV-DNSKIHADLIVFEKDLSKIKVGQR 261

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
              +     + + ++ +  I  I+         +           +           L  
Sbjct: 262 VDFQLT---NQKNEQIEGEIYGINKSFENDSKGV-----------VVHAVIKKPGANLIP 307

Query: 408 GFPAEVLFTAK 418
           G     L    
Sbjct: 308 GMYVTGLIGVG 318


>gi|196015781|ref|XP_002117746.1| hypothetical protein TRIADDRAFT_61800 [Trichoplax adhaerens]
 gi|190579631|gb|EDV19722.1| hypothetical protein TRIADDRAFT_61800 [Trichoplax adhaerens]
          Length = 1160

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 77/204 (37%), Gaps = 9/204 (4%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +       +  K+   K L      E+  +     + + + K   +  ++L D   +   
Sbjct: 918  DAERRRLEVQRKRAERKELEARQAEEEKRVIEEREENERIMKEKLAEMQRLKDLERRQRE 977

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               K     + +V +  +++  R       +L  E    LLRA L   +++  + K +  
Sbjct: 978  EKEK-----MDAVIKERQLEQEREAEALKQKLAEEEIQRLLRARLQQQKEEEYLRKEMEN 1032

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA--NLEFANYLKEISRD 265
            +    Q +  + +    K+  EL   I + +   +  NE+ D+A   L+     ++ + D
Sbjct: 1033 RKL--QEEEQRIKEAEEKNQRELENKIRQVQAAKKRENEMKDQAKRRLKRLAEERQKAAD 1090

Query: 266  LEQNQRTFADEMSKLTILEKTREQ 289
            +E+ +     +  +  +L    ++
Sbjct: 1091 IEKQRALILAKQEQNVVLFNELKK 1114


>gi|89898988|ref|YP_521459.1| secretion protein HlyD [Rhodoferax ferrireducens T118]
 gi|89343725|gb|ABD67928.1| secretion protein HlyD [Rhodoferax ferrireducens T118]
          Length = 356

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/359 (10%), Positives = 89/359 (24%), Gaps = 75/359 (20%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V  G  +  G PL                         I++ ++  +    + 
Sbjct: 57  GRVERILVAEGEFVKAGQPLAQM---------------------QIESLQAQREEALARL 95

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              ++A    E Q+      Y +T + V                                
Sbjct: 96  QQAQQAVSGAEVQVAQQEANYQATLAVVAQRESD-------------------------- 129

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                  L + Q+ L   + L ++   S   L+     V      +     + K     I
Sbjct: 130 -------LDTAQRRLPRSEKLAQEGFFSSQLLDDDRAKVRSLQASVSAAKSQAKAAQVGI 182

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +   +                +   Q       + L  ++       + SP  G + +  
Sbjct: 183 SAARN---------------QISGAQANVRALEATLARIDVELADSELKSPRDGRVQFL- 226

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFPHYADIREKKF 363
                        ++ +V  S +        P+ +   V  G    +             
Sbjct: 227 VAQPGEVLGGGGRVLNLVDLSDVYM--TFFLPETVAGRVALGSDVRIVLDAAPQFVIPAK 284

Query: 364 KAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            + +        +  +  + + +  + V  +I       +  +++ G P        + 
Sbjct: 285 VSFVASTAQFTPKTVETASERQKLMFRVRAQIDPGLLQRHLEQVKTGLPGVAWLKLDSK 343


>gi|73538181|ref|YP_298548.1| multidrug resistance protein MdtN [Ralstonia eutropha JMP134]
 gi|72121518|gb|AAZ63704.1| Secretion protein HlyD [Ralstonia eutropha JMP134]
          Length = 349

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/168 (10%), Positives = 54/168 (32%), Gaps = 2/168 (1%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + ++V + SP  G I K  V     + +G  L   + +    ++   +  ++  R  + T
Sbjct: 47  DADIVHVASPVGGRIAKIHVAENQLVAKGDVLFEIDPVPYQLVVAQARADLELARAALGT 106

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +  +        +  +  +  E+               V +  + +  + L       R
Sbjct: 107 RQRTIATERATASIASEQTKRAEQNYALTARTVERLRPLVADGYVPA--QQLDQAQVAQR 164

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              ++      + +     + +    +  +       A++Q  L+  +
Sbjct: 165 DAGVSLRQANTQRAATAGAVGNEDDAIATVHAREAALAIAQRALDDTK 212



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/331 (11%), Positives = 97/331 (29%), Gaps = 45/331 (13%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            +L   I    S +     K  V E    ++ + L +     +          +     +
Sbjct: 44  ASLDADIVHVASPVGGRIAKIHVAENQLVAKGDVLFEIDPVPYQLVVAQARADLELARAA 103

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L  +   + +          ++       +   + +  ++ L     V    L+Q +   
Sbjct: 104 LGTRQRTIATERATASIASEQTKRAEQNYALTARTVERLRPLVADGYVPAQQLDQAQVAQ 163

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             + + LR+   ++      +                      +    T     + L I 
Sbjct: 164 RDAGVSLRQANTQRAATAGAVGNE-------------------DDAIATVHAREAALAIA 204

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           ++  +   + +P AG +      S       +Q L  +V   +   +        + +++
Sbjct: 205 QRALDDTKVRAPHAGRVSGLTVLS-GEVVIPNQSLFLLVHTGEWFAV-GNFRETSLANIR 262

Query: 344 KGYTATVRFPHYADI-REKKFKAIIEKIDPIISQQDNN--LQTQEY-------------Y 387
            G  ATV    Y+ I R +  +  ++ I   ++  D     ++  Y             +
Sbjct: 263 IGDCATV----YSMIDRSQALRGKVDGIGIGVTDTDRINLPRSLPYVQPSVNWVRVAKRF 318

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            V +++ D   +   +    G  A V     
Sbjct: 319 PVRIRLEDPPEALARV----GASATVEIRHG 345


>gi|299069845|emb|CBJ41126.1| putative secretion protein HlyD [Ralstonia solanacearum CMR15]
          Length = 450

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 84/270 (31%), Gaps = 29/270 (10%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               ++    I+S+     +   +             +    +  L++ Q+     + L+
Sbjct: 100 ELKRQLREAEIASIQAQQALSAAQQIESSTEYQAAARRLLAAQNSLAAAQRRGNEAQMLY 159

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +K  +++ +L+  ++ +     ++     E   +                  LK     L
Sbjct: 160 DKGIIARTELDAGKQEIDTGQSQVDGARDEIATL-----------------RLKRAPAAL 202

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY-----------NQSFSSSNYAQQS 315
              +    +   +L  L    +  T+LSPI+G ++Y            +  ++       
Sbjct: 203 RVLELDLENRQLRLEELRAKLKATTLLSPISGVVLYPEPTDGNDPSARKELNAGAAVTPK 262

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             ++  V  +    I+  V  + I+ V  G    +     +D         +        
Sbjct: 263 DVILT-VGDTSAFLIKTWVDEEDIRRVAPGQAVRIVLGADSDRAFAGTVQRVSSQARAAD 321

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            +    +    +EV +     A +D ++ +
Sbjct: 322 GRGQGSRGTAEFEVQILFKPPADADKSLRV 351


>gi|170750944|ref|YP_001757204.1| polysaccharide export protein [Methylobacterium radiotolerans JCM
           2831]
 gi|170657466|gb|ACB26521.1| polysaccharide export protein [Methylobacterium radiotolerans JCM
           2831]
          Length = 452

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 58/192 (30%), Gaps = 7/192 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +  ++V +      ++ E    + +    D+     ++  EQ +        T     
Sbjct: 168 RNLAAERVGLAAKLARLEAEIGGAETIAFGGDLRGTVDKTYAEQAVRGEQLLFDTRRNAL 227

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              I ++ +S+      M +       L+NKS  L   +   + +L ++ +L  K     
Sbjct: 228 KAEIKAIEQSIASFQNEMST-------LDNKSKTLDRQIELSRGELGLINDLVSKGLTIA 280

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
                 E+          +         + +     +     A + +E   +    ++  
Sbjct: 281 PRKLAAEQSQASFESSRLDVQVAMLRAQQSLTRAERDIIDLKARFRREALSEAADVRQKL 340

Query: 274 ADEMSKLTILEK 285
           A    K    E+
Sbjct: 341 ASIDEKTRTAER 352


>gi|110807900|ref|YP_691420.1| multidrug resistance protein MdtN [Shigella flexneri 5 str. 8401]
 gi|110617448|gb|ABF06115.1| putative membrane protein [Shigella flexneri 5 str. 8401]
          Length = 323

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 41  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 100

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 101 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 160

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G I+ 
Sbjct: 161 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMTTVRAPFDGRIIS 201

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 202 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 256

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 257 FEGKVDSIGYGVLPDDGGL 275



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 42/136 (30%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 24  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 83

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 84  LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 143

Query: 172 RSIYLNRLDLENKSSL 187
               LN + L+ +S+ 
Sbjct: 144 AEADLNAVLLQAQSAA 159


>gi|300818006|ref|ZP_07098219.1| efflux pump membrane protein [Escherichia coli MS 107-1]
 gi|300529416|gb|EFK50478.1| efflux pump membrane protein [Escherichia coli MS 107-1]
          Length = 343

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SIGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 65/206 (31%), Gaps = 16/206 (7%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
               LN + L+ +S+         L A  ++ + D+ + K           ++       
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTKL--------HLEMATVRAPF 215

Query: 224 YKSTLELRENIHEQKNMLRHINELYD 249
               + L+ +I +  + +R I  L D
Sbjct: 216 DGRVISLKTSIGQFASAMRPIFTLID 241


>gi|119472041|ref|ZP_01614299.1| putative substate-binding protein involved in drug resistance
           [Alteromonadales bacterium TW-7]
 gi|119445176|gb|EAW26468.1| putative substate-binding protein involved in drug resistance
           [Alteromonadales bacterium TW-7]
          Length = 388

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 58/163 (35%), Gaps = 5/163 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  S+ +SG ++    V  ++S  +G + K  VE G  + QG  L+  +       ++
Sbjct: 40  GNIADSIMASGNLVFNTQVQ-LRSEVTGRVDKVFVEEGQSVKQGDILMRLDTTAFESEVN 98

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  ++     I   ++ L  L  +    ++ ++        F      +   +    I
Sbjct: 99  RNQAVLRATEIEIKHSQTRLANLERQLKRQKELYDVGLGNQESFEN--IESARDLAKIDI 156

Query: 158 SSVYRSLKMKLT--RMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            S   S        ++    L++       S L A ++  + +
Sbjct: 157 ESRKESYNQAQASLQIAQDRLSKSVFRAPMSGLLASVNIKEGE 199



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 67/219 (30%), Gaps = 25/219 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY---------DEANLEFANYLKEIS 263
           ++++N+ + ++  + +E++ +     N+ R +              E+     +      
Sbjct: 94  ESEVNRNQAVLRATEIEIKHSQTRLANLERQLKRQKELYDVGLGNQESFENIESARDLAK 153

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-----SQPL 318
            D+E  + ++    + L I +    +    +P++G +                      L
Sbjct: 154 IDIESRKESYNQAQASLQIAQDRLSKSVFRAPMSGLLASVNIKEGETVIAGTTNIIGSDL 213

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M +V          +V    I  +K    A +    Y +   K F   +  I      Q 
Sbjct: 214 M-LVADPSAILAELRVDETDIASIKLNQQADIYAAAYPN---KPFSGKVINIGTSAKNQP 269

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +       +V+L  TD        +L  G         
Sbjct: 270 GSQGLSFRVKVLLDPTDR-------QLYAGMSCRAEIAT 301


>gi|40849892|gb|AAR95658.1| plectin 4 [Rattus norvegicus]
 gi|40849894|gb|AAR95659.1| plectin 5 [Rattus norvegicus]
 gi|40849902|gb|AAR95663.1| plectin 9 [Rattus norvegicus]
          Length = 4451

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1247 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1306

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1307 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1359

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1360 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1418

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1419 AELALRVKAEAEAAREKQR 1437



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2087 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2140

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2141 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2200

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2201 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2257

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2258 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2306



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2224 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2283

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2284 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2341

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2342 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2401

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2402 EKDSLLQRERFIEQ 2415



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1544 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1603

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1604 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1653

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1654 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1712

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1713 LAEEAKRQRQLAEED 1727



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2136 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2195

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2196 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2255

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2256 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2315

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2316 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2346



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1245 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1304

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1305 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1364

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1365 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1424

Query: 291  T 291
             
Sbjct: 1425 V 1425



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1455 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1514

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1515 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1574

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1575 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1634

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1635 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1678



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1740 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1799

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1800 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1859

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1860 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 1919

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 1920 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 1957



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1360 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1413

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1414 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1471

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1472 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1529

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1530 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1561


>gi|298208900|ref|YP_003717079.1| cation efflux system protein [Croceibacter atlanticus HTCC2559]
 gi|83848827|gb|EAP86696.1| cation efflux system protein [Croceibacter atlanticus HTCC2559]
          Length = 396

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 100/329 (30%), Gaps = 32/329 (9%)

Query: 83  PLLTFEDIETTDLIDL-KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            LL+  D ++ D  D       +      + E+  ++    +  +  + FE+ + ++   
Sbjct: 6   TLLSCGDTKSEDGHDEATHSETEENHSEGEDEEDNMEGEAKEVMLTAQQFEALQMEIDTL 65

Query: 142 LGKYHSTCSKVF-NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             +Y S   +      +     +    +T      +  ++ +           SH   + 
Sbjct: 66  SQRYMSGYVEANGTLEVPPQNEASITAITGANVASIEVIEGDEVKKNQAVAYLSHPSIIQ 125

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           +  +    NA S +   +QE        E ++ ++E         +            + 
Sbjct: 126 IQSDYL--NAHSNSRFLKQEY-------ERQKRLYEAGVASGMNFQKATADYQSSTAMVS 176

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
            +   L Q     +   +         ++  + SPIAG +      +   Y +    LM+
Sbjct: 177 GLEAQLRQYNINVSGVRN-----GTIYQRVALRSPIAGVVEKVFIKT-GQYVEPQTNLMQ 230

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           IV  +   +    V  K +  VKKG    VRF        K+ +A I  +     Q    
Sbjct: 231 IV-DTDHVHADLMVFEKDVDKVKKGQK--VRFS-IQSRPGKELEAEIYSVSQTFEQDPKA 286

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +                  +    L  G 
Sbjct: 287 VHVH-----------AEIENKEGGLIPGM 304


>gi|322835582|ref|YP_004215608.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
 gi|321170783|gb|ADW76481.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
          Length = 334

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 82/214 (38%), Gaps = 22/214 (10%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-R 264
           + +N   +       R++  + LE   +  +Q             A  + + Y      +
Sbjct: 126 YAQNFYQRQQGLWARRMIAANELENSRSSSDQAKATLKA------ARDKLSQYHNGNRPQ 179

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           ++ Q Q +     ++L+  +   +  T+ +P AGT++  ++    +       ++ +   
Sbjct: 180 EIAQAQASLQQAKAQLSQAQLDLQDTTLTAPSAGTLLT-RAVEPGSMLSAGSTVLTLS-L 237

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDN 379
           ++  ++RA V    + +V+ G    +   +     EK +   I  + P       + +  
Sbjct: 238 TRPVWVRAYVNEVSLYNVQPGTEVQI---YTDGRPEKPYHGKIGFVSPTAEFTPKTVETP 294

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +L+T   Y + + +TD      +  LR G P  V
Sbjct: 295 DLRTDLVYRLRIIVTDA-----DDSLRQGMPVTV 323



 Score = 39.6 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 29/307 (9%), Positives = 78/307 (25%), Gaps = 51/307 (16%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +   QV+ G  I  G  L   +     + +   + ++   +               K
Sbjct: 52  GGRLATLQVDEGDSIKAGETLGELDKGPYQNALQQAEANVAATQA--------------K 97

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +D++   +   E   +                           ++     +  +R   + 
Sbjct: 98  FDLIIAGYRDEEIAQVAAQVNQAQAAYDYAQNFYQRQQGLWARRMIAANELENSRSSSDQ 157

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + L+A      +     +               QE    +++L+  +    Q  +   
Sbjct: 158 AKATLKAARDKLSQYHNGNRP--------------QEIAQAQASLQQAKAQLSQAQLDLQ 203

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              L   +         E    L          +++   +     + ++ +   GT    
Sbjct: 204 DTTLTAPSAGTLLTRAVEPGSMLSAGSTVLTLSLTRPVWVRAYVNEVSLYNVQPGT--EV 261

Query: 304 QSFSSS----------NYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKG 345
           Q ++             +   +    +  P +            R ++        +++G
Sbjct: 262 QIYTDGRPEKPYHGKIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIIVTDADDSLRQG 318

Query: 346 YTATVRF 352
              TV F
Sbjct: 319 MPVTVSF 325


>gi|283851631|ref|ZP_06368910.1| multidrug resistance efflux pump-like protein [Desulfovibrio sp.
           FW1012B]
 gi|283572961|gb|EFC20942.1| multidrug resistance efflux pump-like protein [Desulfovibrio sp.
           FW1012B]
          Length = 321

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 89/264 (33%), Gaps = 20/264 (7%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +N  I+++   +  K+ R   +    + LE +      L  ++ K+L        K A +
Sbjct: 69  YNAKITALSAQIGQKVKRGDVLATYEIPLETRMDEKTRLSPANIKELEY------KMAAA 122

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDLEQNQ 270
             ++++      +     + N+  Q+++  +  E+    +        L      L    
Sbjct: 123 DKEIDRLSAKGRELEAMSQRNMASQQSLSMNAKEIEVFRKEKSSIGEQLSLARELLSDRV 182

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               D   K   + K  +   + +P  G +++      +      +  +  V       I
Sbjct: 183 ELAEDRFGKGAGVGKVPKDGIVKAPTDGYVMWMNPELRNGVKLAKESELFQVGSINPMII 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-SQQDNNLQTQEYYEV 389
           RA+V   + Q +K+G  A V F      +          +  I  +     LQ   YYEV
Sbjct: 243 RAQVHEIEAQKLKEGEAAEVVFDSLPGKKYAA------SVSRIPWAPMAATLQQPSYYEV 296

Query: 390 ILKITDLAFS-----DNNIELRNG 408
            L I +            I ++ G
Sbjct: 297 ELTIPNPGLELKEGLKGQITIQPG 320


>gi|238759742|ref|ZP_04620901.1| Multidrug resistance protein A [Yersinia aldovae ATCC 35236]
 gi|238702068|gb|EEP94626.1| Multidrug resistance protein A [Yersinia aldovae ATCC 35236]
          Length = 394

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 66/197 (33%), Gaps = 20/197 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    +L   + +   + +N    +   +L +  LS  Q DL     L   +A+ +
Sbjct: 102 EQAYEQARTALANTVRQTHQLMINSKQYQANIALKKTELSKAQNDLKRRVVLGSVDAIGR 161

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L      V  +   L   I +       +     E                   Q   
Sbjct: 162 EELQHARDAVDAAQASLDVAIAQYNANQALVLNTPLE------------------KQPAV 203

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +KL       ++  ++SPI G +   +S           PLM ++P ++  ++ A 
Sbjct: 204 EQAAAKLRDAWLALQRTKVVSPITGFVSR-RSVQVGAEIANGAPLMAVIPANE-MWVDAN 261

Query: 334 VTPKQIQHVKKGYTATV 350
               Q+ +++ G +ATV
Sbjct: 262 FKETQLANMRIGQSATV 278



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 55/160 (34%), Gaps = 7/160 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              N V+I S   G +     EN   +  G  LL  +  +     +  + ++ N      
Sbjct: 61  VSGNQVQIMSQVPGSVVSVNFENTDLVKSGDVLLALDPTDAEQAYEQARTALANTVRQTH 120

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  I++++   +    K ++ +   + +   +L  +        +     + +   SL +
Sbjct: 121 QLMINSKQYQANIALKKTELSKAQNDLKRRVVLGSVDAIGREELQHARDAVDAAQASLDV 180

Query: 167 KLTR--MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            + +       +    LE + ++ +A        L + + 
Sbjct: 181 AIAQYNANQALVLNTPLEKQPAVEQAAAKLRDAWLALQRT 220


>gi|87306901|ref|ZP_01089047.1| Secretion protein HlyD [Blastopirellula marina DSM 3645]
 gi|87290274|gb|EAQ82162.1| Secretion protein HlyD [Blastopirellula marina DSM 3645]
          Length = 559

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 70/197 (35%), Gaps = 14/197 (7%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K+ L+RAL     +D  + +    +NAV+   L + +  + KS  E+       +N+   
Sbjct: 257 KTRLIRALAERSLQDQNVKRLHIARNAVAGIRLLEADADLSKSEAEILSIAQSLENL--- 313

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              L  +         +E    L           S+L     T     + + IAG +V  
Sbjct: 314 --GLSPDIESLQQVSEREAFEQLR-FLGVPESLGSRLKAEVSTANLLPVRASIAG-VVAE 369

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKL-TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
           ++ +        + L +IV   ++   +   +  + ++ V  G    VRF    D   ++
Sbjct: 370 RNVTQGEVVDTHRSLFRIVSADQMWLMLD--IPLEDVEQVVVGQK--VRFQA--DGSAQE 423

Query: 363 FKAIIEKIDPIISQQDN 379
               ++ I      Q  
Sbjct: 424 VVGQVDWISTTADPQTR 440


>gi|194335636|ref|YP_002017430.1| efflux transporter, RND family, MFP subunit [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308113|gb|ACF42813.1| efflux transporter, RND family, MFP subunit [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 360

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 17/195 (8%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R    +  E +   H+ K        L+ E  +     L E  +   Q +     +  +L
Sbjct: 101 REAKAALAEQQAQTHDNKLRRTRKENLFREGAISR-QELDEAEKMSIQGEELLRQKALQL 159

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            + E   ++ T+ +P AG I+  QS    +Y   +  + ++V       +  +V    I 
Sbjct: 160 QMREDDLKKLTVSAPFAG-ILTLQSVKEGDYVAANSLVARVV-DPSAYVVTVEVDELDIP 217

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            ++ G   TV F  + D R K        +  I+ Q D   +T   Y        L    
Sbjct: 218 RIRFGQATTVAFDAWPDKRFKA------TVSRIVQQTDRVTKTSRIY--------LKLDH 263

Query: 401 NNIELRNGFPAEVLF 415
              +++ G  A    
Sbjct: 264 PATDIQAGMTATANI 278


>gi|307300023|ref|ZP_07579808.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
 gi|306904912|gb|EFN35495.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
          Length = 410

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 56/356 (15%), Positives = 119/356 (33%), Gaps = 27/356 (7%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET-TDLIDLKKVSIKNLRCH 109
                +  I +P  G I+K     G+ + +G  L T  +      ++   +   +     
Sbjct: 37  TVNARLAVINAPIDGEIEKPAPRIGTPVAEGETLATIRNQRVNRAILASLRTDHRTAVER 96

Query: 110 IDTEKSALDFLNNKYDVLEKAFES-REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           +   +   D L    D L    +  R   +     +      +V       V        
Sbjct: 97  VAALRRERDELARLRDDLAGRLDIFRNATIASLEREVQILQKRVEVSRAQDVVA------ 150

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
              R   + R DLE+K    R ++ + Q          E + ++  +L QQ     +  +
Sbjct: 151 ---RVDLVRRQDLESKGIFTRKMVEAAQAAGAAAGGELEISNLT-VELLQQRLNAVRQGI 206

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFAN---YLKEISRDLEQNQRTFADEMSKLTILEK 285
            L   + + +N + +  +  DE  +   +    + E     +Q  +  A+E  ++  LE 
Sbjct: 207 FL---VGDGQNDVPYSRQRQDEVIVRIHDLNTRIAENEARAKQTDQQIAEEERRVLSLE- 262

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                TI SP  G +      S SN    ++ +M+I+   +  ++   V       +  G
Sbjct: 263 ---AATIPSPFDGVVWSRNVISGSNVVLNNE-MMRIL-DCRELFVDILVPEVDYDEIYPG 317

Query: 346 YTATVRFPHYADIREKKFKAIIEK---IDPIISQQDNNLQTQEYYEVILKITDLAF 398
             A VR     D+   + +A+      ++      +     +    + + +   A 
Sbjct: 318 REAEVRLFGRGDVFRGRVQAVKGSSAVVEKDSLAANEPETEERNARIRVTLAPSAL 373


>gi|296134725|ref|YP_003641967.1| secretion protein HlyD family protein [Thiomonas intermedia K12]
 gi|295794847|gb|ADG29637.1| secretion protein HlyD family protein [Thiomonas intermedia K12]
          Length = 341

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 61/210 (29%), Gaps = 26/210 (12%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            Q R      +   E   +             EA         E S+ L   Q       
Sbjct: 130 AQRRDHAAPGVVSTEERTDATAAAAIGQAQVLEARARLGQAQAERSKALAAEQLA----R 185

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + L + +    +  + +P  G I   +   + +YA    P M +V +S   Y+       
Sbjct: 186 AHLALAQLNLARTQVRAPSDGYITNLKL-EAGDYAAAGAPRMALV-NSNSIYVEGYFEET 243

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ------------- 384
           ++  +  G    +R            +  +  I   I+ ++N + +              
Sbjct: 244 KLPQIHVGDPVDIRLMA----GGVHLRGTVTGIARGIASRENPMGSDLLSETNPIFDWVR 299

Query: 385 --EYYEVILKITDLAFSDNNIELRNGFPAE 412
             +   V + I   +    ++ L  G  A 
Sbjct: 300 LAQRIPVRIAIDRASLPP-HLRLAAGMTAT 328



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 45/156 (28%), Gaps = 4/156 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV I    SG+I+   V +   + +G  L   +     + +   +  + + +  + 
Sbjct: 44  VRADVVRIAPDVSGLIRSVAVHDNEYVHRGQVLFIVDPDRFVNAVQQAQAEMASAQAALQ 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV----YRSLKMK 167
             ++ +               S  ++            S       ++        +   
Sbjct: 104 VAQADIHAAQAGVAAANAQSSSLRDKAQRRDHAAPGVVSTEERTDATAAAAIGQAQVLEA 163

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             R+      R        L RA L+  Q +L   +
Sbjct: 164 RARLGQAQAERSKALAAEQLARAHLALAQLNLARTQ 199


>gi|225848330|ref|YP_002728493.1| acriflavin resistance protein AcrE [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643486|gb|ACN98536.1| acriflavin resistance protein AcrE [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 387

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 52/150 (34%), Gaps = 12/150 (8%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G I  E+N   + + + G I K  V  G  +  G  L   +D E     +     ++ 
Sbjct: 61  ADGMITAENNAK-VSTKWMGRILKIYVNEGDYVKAGQTLAVLDDSEIRQQKNEALAGLEE 119

Query: 106 L-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           L +   +   +    L N        F  R  +    L + ++   +     +  +   +
Sbjct: 120 LSKARDEALAARKAALEN------YEFAKRTYERFKNLYQENAVSKQ----QLEEIETKM 169

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
               + +  +      L+ K S ++A ++ 
Sbjct: 170 VAAKSMVEQVDAKLAQLKAKESQVKAKINQ 199



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 68/219 (31%), Gaps = 32/219 (14%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  ++    G Y      +     S + +     L  +  +   R +             
Sbjct: 80  RILKIYVNEGDYVKAGQTLAVLDDSEIRQQKNEALAGLEELSKARDEALAARKAALENYE 139

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             ++     KNL+++NAVS+  L + E  +  +                           
Sbjct: 140 FAKRTYERFKNLYQENAVSKQQLEEIETKMVAAK-------------------------- 173

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              + ++++   L Q +   +   +K+  ++       I +P  G ++  +     + A 
Sbjct: 174 ---SMVEQVDAKLAQLKAKESQVKAKINQVDIMAGYAVIKAPFDGYVIK-KMNDEGDMAA 229

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
              P+  I    K     A +    +  VK G T  V+ 
Sbjct: 230 PGMPIFII--GEKKLQFVANLDESLLDKVKVGDTLKVKL 266


>gi|209526141|ref|ZP_03274672.1| methyltransferase FkbM family [Arthrospira maxima CS-328]
 gi|209493397|gb|EDZ93721.1| methyltransferase FkbM family [Arthrospira maxima CS-328]
          Length = 729

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 78/218 (35%), Gaps = 12/218 (5%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             +  ++      K+  ++N +  +   +  L+   + +   +K  E+ + QL       
Sbjct: 318 RKDLDKSQSDFQEKQKELENSQSQLQQTRKDLEKSQSDFQQKQKELENSQSQLQQTQKDL 377

Query: 146 HSTCS--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             + S  +     + +    L+   T ++        + ++       L   QKDL   +
Sbjct: 378 EKSQSDFQQSQKDLENSQSQLEQTQTELQQSQYQEDQILSELEQYHTRLQQTQKDLEKSQ 437

Query: 204 NLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           + F++       SQ+ L Q ++ + KS  + ++   E +N    + +   +     +++ 
Sbjct: 438 SDFQQKQKELENSQSQLQQTQKDLEKSQSDFQQKQKELENSQSQLQQTQKDLEKSQSDFQ 497

Query: 260 KEI------SRDLEQNQRTFADEMSKLTILEKTREQKT 291
           ++          L+Q Q+      S     +K  E   
Sbjct: 498 QKQKELENSQSQLQQTQKDLEKSQSDFQQKQKELENSQ 535



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 76/214 (35%), Gaps = 15/214 (7%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +  ++       +  ++N +  ++  ++ L     + D +    E    +L         
Sbjct: 376 DLEKSQSDFQQSQKDLENSQSQLEQTQTELQQSQYQEDQILSELEQYHTRLQQTQKDLEK 435

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + S  F      +  S        + +  ++ D + K   L    S  Q+     K+L +
Sbjct: 436 SQSD-FQQKQKELENSQSQLQQTQKDLEKSQSDFQQKQKELENSQSQLQQ---TQKDLEK 491

Query: 208 KNAV----------SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             +           SQ+ L Q ++ + KS  + ++   E +N    + +   +     ++
Sbjct: 492 SQSDFQQKQKELENSQSQLQQTQKDLEKSQSDFQQKQKELENSQSQLQQTRKDLEKSQSD 551

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           + ++  ++LE +Q       +K+  ++   +   
Sbjct: 552 FQQK-QKELENSQSERKKLETKVKEVQDQLKNAQ 584



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 73/200 (36%), Gaps = 9/200 (4%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           T   +   +   + L+  +   +  LD   + +   +K  E+ + QL         + S 
Sbjct: 240 TQSRLQELESEQELLKYQLQQTRKDLDKSQSDFQQKQKELENSQSQLQQTRKDLEKSQSD 299

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            F      +  S        + +  ++ D + K   L    S  Q+     K+L +    
Sbjct: 300 -FQQKQKELENSQSQLQQTRKDLDKSQSDFQEKQKELENSQSQLQQ---TRKDLEK---- 351

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           SQ+D  Q+++ +  S  +L++   + +       +   +     +  L++   +L+Q+Q 
Sbjct: 352 SQSDFQQKQKELENSQSQLQQTQKDLEKSQSDFQQSQKDLENSQSQ-LEQTQTELQQSQY 410

Query: 272 TFADEMSKLTILEKTREQKT 291
                +S+L       +Q  
Sbjct: 411 QEDQILSELEQYHTRLQQTQ 430



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 66/191 (34%), Gaps = 7/191 (3%)

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            +   +S L  L ++ ++L+   +   + L      +     ++ N   S + ++ K   
Sbjct: 236 ELKITQSRLQELESEQELLKYQLQQTRKDLDKSQSDFQQKQKELENSQ-SQLQQTRKDLE 294

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
                    + +LEN  S L+       K  +  +   ++   SQ+ L Q  + + KS  
Sbjct: 295 KSQSDFQQKQKELENSQSQLQQTRKDLDKSQSDFQEKQKELENSQSQLQQTRKDLEKSQS 354

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEI------SRDLEQNQRTFADEMSKLTI 282
           + ++   E +N    + +   +     +++ +           LEQ Q        +   
Sbjct: 355 DFQQKQKELENSQSQLQQTQKDLEKSQSDFQQSQKDLENSQSQLEQTQTELQQSQYQEDQ 414

Query: 283 LEKTREQKTIL 293
           +    EQ    
Sbjct: 415 ILSELEQYHTR 425



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 70/189 (37%), Gaps = 7/189 (3%)

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            +NLR    TE    +    +  + E   ES +E L   L +      K          +
Sbjct: 221 AQNLRLQPPTEPKPTELKITQSRLQE--LESEQELLKYQLQQTRKDLDKS-QSDFQQKQK 277

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L+   ++++    +    ++     +  L + Q  L   +   +K   SQ+D  ++++ 
Sbjct: 278 ELENSQSQLQQTRKDLEKSQSDFQQKQKELENSQSQLQQTRKDLDK---SQSDFQEKQKE 334

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           +  S  +L++   + +       +   E     +  L++  +DLE++Q  F      L  
Sbjct: 335 LENSQSQLQQTRKDLEKSQSDFQQKQKELENSQSQ-LQQTQKDLEKSQSDFQQSQKDLEN 393

Query: 283 LEKTREQKT 291
            +   EQ  
Sbjct: 394 SQSQLEQTQ 402


>gi|170681502|ref|YP_001746474.1| multidrug resistance protein MdtN [Escherichia coli SMS-3-5]
 gi|218702748|ref|YP_002410377.1| multidrug resistance protein MdtN [Escherichia coli IAI39]
 gi|300938229|ref|ZP_07152996.1| efflux pump membrane protein [Escherichia coli MS 21-1]
 gi|170519220|gb|ACB17398.1| multidrug resistance protein MdtN [Escherichia coli SMS-3-5]
 gi|218372734|emb|CAR20610.1| membrane fusion protein of efflux pump [Escherichia coli IAI39]
 gi|300456773|gb|EFK20266.1| efflux pump membrane protein [Escherichia coli MS 21-1]
          Length = 343

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|86157999|ref|YP_464784.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774510|gb|ABC81347.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 348

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 57/209 (27%), Gaps = 15/209 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
               R       +           +                     S +L + +   A  
Sbjct: 148 LDLRRAEELKAGDAIAAERYDATRIAGATARAGAGANRAQYAAALASGELARARVKAAQ- 206

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + + +         + +P +G +    +       Q +Q L ++VP    TY+ A    
Sbjct: 207 -AAVDLARLQLSYTEVRAPASGRVSRLAAR-VGQIVQPAQSLGQLVP--DRTYVVANFKE 262

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILK 392
            Q   ++ G    V    Y           +E I      +      +  +  + +V+ +
Sbjct: 263 TQTGDIRPGQPVDVEIDAYGGRT---LHGKVESISGGTGARFALLPPDNASGNFVKVVER 319

Query: 393 IT---DLAFSDNNIELRNGFPAEVLFTAK 418
           +           ++ LR G  A V    +
Sbjct: 320 VPVRIAWDAVPADLPLRAGLSAFVTVHTR 348



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 25/219 (11%), Positives = 65/219 (29%), Gaps = 10/219 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E +VV I    +G + +  V + +Q+ QG PL+  +  +    + +++   +       
Sbjct: 64  VEADVVAIAPRVAGPVAEVLVADNAQVRQGQPLVRIDPADY--QVRVRQAEAELATAQAQ 121

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              +       +  V     E+ +  L     +       +      +   +        
Sbjct: 122 AAAAEAQVSVARAGVTRAEAEAEKAALDLRRAEELKAGDAIAAERYDATRIAGATARAGA 181

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +             L RA + + Q  + + +         Q    +           L 
Sbjct: 182 GANRAQYAAALASGELARARVKAAQAAVDLARL--------QLSYTEVRAPASGRVSRLA 233

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             + +     + + +L  +     AN+ +  + D+   Q
Sbjct: 234 ARVGQIVQPAQSLGQLVPDRTYVVANFKETQTGDIRPGQ 272


>gi|281355869|ref|ZP_06242363.1| secretion protein HlyD family protein [Victivallis vadensis ATCC
           BAA-548]
 gi|281318749|gb|EFB02769.1| secretion protein HlyD family protein [Victivallis vadensis ATCC
           BAA-548]
          Length = 347

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 81/232 (34%), Gaps = 27/232 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   +  +  ++K++  R+  I       + +     A  ++ Q        ++ + AVS
Sbjct: 83  YELKVEDLTYAVKVEEARLAGIDAKLKAAKAQVEKDAAEAANRQYLSKQAVEMYAQQAVS 142

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q    +  R    +  +L  + H+ +                       + R+ E     
Sbjct: 143 QTYTEEARRAELAANAQLSASKHQLEA----------------------VEREKEMVAAG 180

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                S+L + +   EQ T+ +   GTI      S   Y +    L   +      +I+A
Sbjct: 181 IGRLQSQLKLAKIYLEQTTVYALNDGTISNMHV-SPGGYYRPGDILFAFIESDD-WFIQA 238

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                 +  ++ G TA++    Y     KKF  ++E++     ++  + +T 
Sbjct: 239 NFEETDLSMIRPGQTASIWLWQYP---GKKFHGVVEQVSFGAERRQTSEETG 287



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 51/158 (32%), Gaps = 2/158 (1%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            N   +     G + +  V+N  ++ +G PL T         ++    ++K     +   
Sbjct: 45  TNTRPVSPLVEGYLTEVLVKNHQKVKKGEPLFTIFRPPYELKVEDLTYAVKVEEARLAGI 104

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            + L     K  V + A E+   Q L            V         R+      ++ +
Sbjct: 105 DAKLK--AAKAQVEKDAAEAANRQYLSKQAVEMYAQQAVSQTYTEEARRAELAANAQLSA 162

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +E +  ++ A +   Q  L + K   E+  V
Sbjct: 163 SKHQLEAVEREKEMVAAGIGRLQSQLKLAKIYLEQTTV 200


>gi|29654126|ref|NP_819818.1| multidrug resistance protein A [Coxiella burnetii RSA 493]
 gi|161830253|ref|YP_001596900.1| multidrug resistance protein A [Coxiella burnetii RSA 331]
 gi|29541392|gb|AAO90332.1| multidrug resistance protein A [Coxiella burnetii RSA 493]
 gi|161762120|gb|ABX77762.1| multidrug resistance protein A [Coxiella burnetii RSA 331]
          Length = 331

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/246 (11%), Positives = 71/246 (28%), Gaps = 24/246 (9%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              + R E+ +       +     F   ++           ++++  +            
Sbjct: 56  SEIDVRNEEHVQKGQLLFTIDPAPFTIELNKAQAQRDATRQKIQAADMAVKSARATVVER 115

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +A L+  + +   +  L +K  VS++D                    +      H+ E  
Sbjct: 116 KAELTHTRLETKRILTLMKKQFVSRSD-------------------GDLAIKNLHVAEAA 156

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A       + E   +L           + +   +   +   + +P +G I        
Sbjct: 157 LNAAQNQLEEMIEKRGELGDKNAQLRLAQAAVEKAKLDLQYTRVFAPTSGYIANFNLRH- 215

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +     QPL  ++   +  + +A     Q+  +  G  AT++   Y       F   + 
Sbjct: 216 GDVVSAYQPLFALI-EDQTWWAQANFKETQLARIHTGEQATIKLDMYPHQI---FIGKVV 271

Query: 369 KIDPII 374
            ++   
Sbjct: 272 DVNKDS 277



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 15/192 (7%)

Query: 20  MTLLSIIGIIGLITWSI---LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           + +++I+ I G   W         + +   +  I     V       SG + +  V N  
Sbjct: 12  LFIIAILSIGGYFYWQHQNRYPSTDDAYIQADVINVASRV-------SGTVSEIDVRNEE 64

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT-----EKSALDFLNNKYDVLEKAF 131
            + +G  L T +    T  ++  +      R  I       + +    +  K ++     
Sbjct: 65  HVQKGQLLFTIDPAPFTIELNKAQAQRDATRQKIQAADMAVKSARATVVERKAELTHTRL 124

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E++    L        +   +    +     +L     ++  +   R +L +K++ LR  
Sbjct: 125 ETKRILTLMKKQFVSRSDGDLAIKNLHVAEAALNAAQNQLEEMIEKRGELGDKNAQLRLA 184

Query: 192 LSSHQKDLTMMK 203
            ++ +K    ++
Sbjct: 185 QAAVEKAKLDLQ 196


>gi|312886442|ref|ZP_07746051.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
 gi|311301070|gb|EFQ78130.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
          Length = 398

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 77/222 (34%), Gaps = 23/222 (10%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHE---QKNMLRHINELYDEANLEFANYLKE 261
            +K   +++ D    +  V +    L     +   Q+       +LY    L  A+Y   
Sbjct: 81  VKKGQLLAELDKTLFQASVSQYEANLASAQSQYVYQQGNYSRQGQLYKVGALSKADYDNA 140

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPL 318
           +    +  + +     ++L   +K     ++ SPI GT++  +S S       S     L
Sbjct: 141 LYT-YKAAEASVNSMRAQLKSAQKNLSLASVYSPIDGTVLS-RSVSEGQTVAASFSTPTL 198

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFKAIIEKIDPIISQQ 377
             I        +RA V    +  +K G  ++     +  D      + I  ++ P IS  
Sbjct: 199 FSIAKDLTKMQVRASVDEADVGGIKIGERSSFTVDAFLDDTFTGTIQEI--RLSPSISSN 256

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                    Y  I+  +     +++ +L+ G  A +    K 
Sbjct: 257 VVT------YTTIINTS-----NDDQKLKPGMTANITIYTKE 287



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 59/185 (31%), Gaps = 22/185 (11%)

Query: 21  TLLSIIGI--IGLITWSILL------------------PIEISVSSSGEILNEDNVVEIK 60
            +  I+G+  +    W                       I  +V+++G+I   D V  + 
Sbjct: 6   IIFIILGVAAVAFAAW-YFAFRKPEEVVVFSTEKPKTGYISQTVTATGKIQPVDTV-AVG 63

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +  SG I K   +  S++ +G  L   +       +   + ++ + +     ++      
Sbjct: 64  TQVSGTIAKLYADFNSKVKKGQLLAELDKTLFQASVSQYEANLASAQSQYVYQQGNYSRQ 123

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
              Y V   +    +  L  +     S  S       +    SL    + +    L+R  
Sbjct: 124 GQLYKVGALSKADYDNALYTYKAAEASVNSMRAQLKSAQKNLSLASVYSPIDGTVLSRSV 183

Query: 181 LENKS 185
            E ++
Sbjct: 184 SEGQT 188


>gi|222086019|ref|YP_002544551.1| protein secretion protein [Agrobacterium radiobacter K84]
 gi|221723467|gb|ACM26623.1| protein secretion protein [Agrobacterium radiobacter K84]
          Length = 407

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 57/422 (13%), Positives = 115/422 (27%), Gaps = 97/422 (22%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPF 63
           K  KR  P       LL +  ++G   +     I   + +   +  +    +V       
Sbjct: 51  KPRKRRSPTRPILFALLPVALVVGGYYYVTGGQIMSTDNAYVQADMVGVSTDV------- 103

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V     + +G  L   +       ++  +  + N R                
Sbjct: 104 SGTVISVDVHENEVVKKGQVLFRLKPDSFRITLEGAQAQLGNAR---------------- 147

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                        Q+L+    Y  + +++        Y          ++ Y  + +L N
Sbjct: 148 ------------NQILNLQASYKQSLAEIAQAQADIPY---------YQNEYERQQNLIN 186

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
            S   +A     + +L        +  VS         +           +    ++   
Sbjct: 187 SSVASKAAYDQAKHNLD-----AAQQKVS---------VAQAQAATTLAQLGGNADLPVE 232

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            N LY +A     N  +E+                         +   + +P  G     
Sbjct: 233 QNPLYLQAKAAVDNAQREL-------------------------DDTVVRAPFDGITTNV 267

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            S     Y   +Q    +V  +   +I A     ++ +VK G   T+    Y  +    +
Sbjct: 268 PSLQVGAYLTAAQQGFSLV-STTNMWINASPKETELTYVKTGQKVTISVDAYPGVT---W 323

Query: 364 KAIIEKIDPII----SQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFT 416
           K  +  I P      S       T  + +V+ +I     +  +     LR G        
Sbjct: 324 KGTVSSIAPASGASFSLLPAQNTTGNWVKVVQRIPMIISIDDTQGKPPLRVGMSVVAGVD 383

Query: 417 AK 418
             
Sbjct: 384 TG 385


>gi|83312372|ref|YP_422636.1| membrane-fusion protein [Magnetospirillum magneticum AMB-1]
 gi|82947213|dbj|BAE52077.1| Membrane-fusion protein [Magnetospirillum magneticum AMB-1]
          Length = 436

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 8/166 (4%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSI----IGIIGLITWSILLPIEISVSSSGEILNEDNVV 57
           +   W  L R  P +  +  + SI    + +   I  ++L P+ +SV +  E++   N  
Sbjct: 145 YGHAWAVLHRPSPVTEWKRKVTSIPRYRLKLAAGIVLALLFPVRLSVLAPAEVVAH-NPA 203

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I+SP  G+I+K  V     + +G  L   +    T  +++ K ++   +  +D      
Sbjct: 204 VIRSPMDGVIEKVHVRPNQPVGEGDILFELDRTTLTGKLEVAKKALSTAQAELDQATQQA 263

Query: 118 DF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            F      +  ++    E R  +          +  K    G++ +
Sbjct: 264 FFDSKAKGQLAIIRARIEERSAEAAQLEDLMARSQVKAPRAGVAVL 309



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 43/126 (34%), Gaps = 3/126 (2%)

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L   +   K  L       D+A  + A +  +    L   +    +  ++   LE    +
Sbjct: 238 LTGKLEVAKKALSTAQAELDQATQQ-AFFDSKAKGQLAIIRARIEERSAEAAQLEDLMAR 296

Query: 290 KTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             + +P AG  ++ + +          + ++  V       + A + P  +  ++KG   
Sbjct: 297 SQVKAPRAGVAVLDDPAEWQGRPVNVGEKVLA-VASPHDVEVEAWLAPADVIALEKGDPV 355

Query: 349 TVRFPH 354
           ++    
Sbjct: 356 SLFLNA 361


>gi|312974117|ref|ZP_07788288.1| multidrug resistance protein mdtN [Escherichia coli 1827-70]
 gi|310331651|gb|EFP98907.1| multidrug resistance protein mdtN [Escherichia coli 1827-70]
          Length = 343

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRLGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|307245700|ref|ZP_07527786.1| hypothetical protein appser1_9030 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307250073|ref|ZP_07532036.1| hypothetical protein appser4_8600 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306853402|gb|EFM85621.1| hypothetical protein appser1_9030 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306857870|gb|EFM89963.1| hypothetical protein appser4_8600 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 353

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 106/324 (32%), Gaps = 32/324 (9%)

Query: 103 IKNLRCHIDTEKSALDFL----NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           I ++   I+ E+  +  L      +  + E    S+ + L+        +        I+
Sbjct: 33  IASVNGRIEVERLDIASLYAGRVEEIYIQEGQDVSKNQPLVRLSSSQSQSQVNSAQAQIA 92

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +   S+     + R           + +  +   +  + +L+  KNL   N +S ++L +
Sbjct: 93  AAEASVNNAQAQKRRATEAVSRANAEIAAQQQKANIAKLELSNAKNLHRDNLISSSELER 152

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           ++     S   +      +      I +                   + Q + T     +
Sbjct: 153 RQANYKASLAAVETAKAAKAEAQATITQAQ---------------ATISQAEATVNQAKA 197

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                +   +   I +P+ G I   +     +       ++ ++  +   Y+   +   Q
Sbjct: 198 FAEQADSQNDDMLIRAPLDGRI-EYKIAMLGSVVGIGGKVVSLL-DTSTVYLNVFLPAHQ 255

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKI 393
              V+    A ++      +    F A +  +         S + +  +++  +++ L+I
Sbjct: 256 SNLVRLNDEARIKIDGSDIV----FPAKVVFVASEAQFTPKSVETSEERSKLMFKIKLQI 311

Query: 394 -TDLAFSDNNIELRNGFPAEVLFT 416
            TD+A    N+ L+ G  A     
Sbjct: 312 PTDIAIQHKNL-LKGGMTAMGYVK 334


>gi|167625414|ref|YP_001675708.1| secretion protein HlyD family protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167355436|gb|ABZ78049.1| secretion protein HlyD family protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 355

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 71/227 (31%), Gaps = 21/227 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A E    Q L    K  S  ++ +   +     +L+    +  ++Y      E   +  +
Sbjct: 58  AVEVHNNQQLKRGDKLFSIDARKYQLAMEKAQLALEQAHEQEDAMYAKVEAAEANVATNQ 117

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A   +   +   +  L ++  VS + L+        S   LR    + + +   +     
Sbjct: 118 AAFDNASSEYRRISQLAKQKLVSVSMLDSALANNNASGANLRAAQQDLRALTVQLGSQPG 177

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           ++++  A                     + L   E       + +P  G +   Q     
Sbjct: 178 QSSVVRA-------------------AKNSLQQAELDLSHTQVFAPSDGVVTNLQL-EVG 217

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           + A    PL+  +P     +I A    K +  + K   A V F  + 
Sbjct: 218 STANSHMPLLTFIPTDS-LWIAADFREKAVARIDKQSKALVAFDAFP 263



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 58/151 (38%), Gaps = 5/151 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            +  V++I    +G +   +V N  Q+ +G  L + +  +    ++  +++++      D
Sbjct: 41  VQGYVIQIAPEVTGTVTAVEVHNNQQLKRGDKLFSIDARKYQLAMEKAQLALEQAHEQED 100

Query: 112 T-----EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                 E +  +   N+      + E R    L        +         ++   +L+ 
Sbjct: 101 AMYAKVEAAEANVATNQAAFDNASSEYRRISQLAKQKLVSVSMLDSALANNNASGANLRA 160

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
               +R++ +       +SS++RA  +S Q+
Sbjct: 161 AQQDLRALTVQLGSQPGQSSVVRAAKNSLQQ 191


>gi|153208490|ref|ZP_01946774.1| multidrug resistance protein A [Coxiella burnetii 'MSU Goat Q177']
 gi|212218282|ref|YP_002305069.1| multidrug resistance protein A [Coxiella burnetii CbuK_Q154]
 gi|120575946|gb|EAX32570.1| multidrug resistance protein A [Coxiella burnetii 'MSU Goat Q177']
 gi|212012544|gb|ACJ19924.1| multidrug resistance protein A [Coxiella burnetii CbuK_Q154]
          Length = 319

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/246 (11%), Positives = 71/246 (28%), Gaps = 24/246 (9%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              + R E+ +       +     F   ++           ++++  +            
Sbjct: 56  SEIDVRNEEHVQKGQLLFTIDPAPFTIELNKAQAQRDATRQKIQAADMAVKSARATVVER 115

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +A L+  + +   +  L +K  VS++D                    +      H+ E  
Sbjct: 116 KAELTHTRLETKRILTLMKKQFVSRSD-------------------GDLAIKNLHVAEAA 156

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A       + E   +L           + +   +   +   + +P +G I        
Sbjct: 157 LNAAQNQLEEMIEKRGELGDKNAQLRLAQAAVEKAKLDLQYTRVFAPTSGYIANFNLRH- 215

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +     QPL  ++   +  + +A     Q+  +  G  AT++   Y       F   + 
Sbjct: 216 GDVVSAYQPLFALI-EDQTWWAQANFKETQLARIHTGEQATIKLDMYPHQI---FIGKVV 271

Query: 369 KIDPII 374
            ++   
Sbjct: 272 DVNKDS 277



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 15/192 (7%)

Query: 20  MTLLSIIGIIGLITWSI---LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           + +++I+ I G   W         + +   +  I     V       SG + +  V N  
Sbjct: 12  LFIIAILSIGGYFYWQHQNRYPSTDDAYIQADVINVASRV-------SGTVSEIDVRNEE 64

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT-----EKSALDFLNNKYDVLEKAF 131
            + +G  L T +    T  ++  +      R  I       + +    +  K ++     
Sbjct: 65  HVQKGQLLFTIDPAPFTIELNKAQAQRDATRQKIQAADMAVKSARATVVERKAELTHTRL 124

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E++    L        +   +    +     +L     ++  +   R +L +K++ LR  
Sbjct: 125 ETKRILTLMKKQFVSRSDGDLAIKNLHVAEAALNAAQNQLEEMIEKRGELGDKNAQLRLA 184

Query: 192 LSSHQKDLTMMK 203
            ++ +K    ++
Sbjct: 185 QAAVEKAKLDLQ 196


>gi|27382093|ref|NP_773622.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110]
 gi|27355263|dbj|BAC52247.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110]
          Length = 390

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 70/215 (32%), Gaps = 23/215 (10%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           + A +++D +    +  K+ L    ++ ++      +      A L  A   ++I     
Sbjct: 120 EGAQARHD-DALRELQIKAALSKNGSVSQRDAERAQMTARAFAAELSAAKAREQIRA--- 175

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVPH 324
                     + L       E+ TI SPI G ++  +S            +  +  I   
Sbjct: 176 ---AGVMAARASLERARLDLERSTIKSPIDGVVIR-RSVELGQTLAASLQAPTIFTIARD 231

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                + A V+   I  V+ G         Y       F+  + +I    ++   N+ T 
Sbjct: 232 LSDMRVNAFVSEADIGAVRTGQRVFFGVDSYPGR---VFEGRVREI-RKAARMVQNVVT- 286

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             Y V++        + +  L  G  A+V    + 
Sbjct: 287 --YTVMISAP-----NPDAFLLPGMTADVRILVQE 314



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 58/168 (34%), Gaps = 3/168 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+++G +   D V E+ S  SG + K   ++ S++  G PL   +      L+   + ++
Sbjct: 47  VTAAGTLEAVDTV-EVSSQLSGQVAKLMADHNSRVRAGEPLAALDSATFEVLLKETEAAL 105

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                  +  K+A++    ++D   +  + +     +                  +   S
Sbjct: 106 AVALAQQEEAKAAIEGAQARHDDALRELQIKAALSKNGSVSQRDAERAQMTARAFAAELS 165

Query: 164 LKMKLTRMRS--IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                 ++R+  +   R  LE     L         D  +++   E  
Sbjct: 166 AAKAREQIRAAGVMAARASLERARLDLERSTIKSPIDGVVIRRSVELG 213


>gi|134292597|ref|YP_001116333.1| secretion protein HlyD family protein [Burkholderia vietnamiensis
           G4]
 gi|134135754|gb|ABO56868.1| secretion protein HlyD family protein [Burkholderia vietnamiensis
           G4]
          Length = 299

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 33/227 (14%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L Q +  +     EL E I E +      + + +E+  + A  ++++   L Q    
Sbjct: 83  RIALEQADANLASEQAELDEAIREDRRNRAMPDVVAEESAQQGATRVEKLRAALAQAH-- 140

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                S   +     E+  + +P+ GT+          Y    +  M +V +     +  
Sbjct: 141 -----SARDLAALNLERTLVRAPVDGTVTNVGLL-PGVYLSAGKGAMALV-NDTSLRVEG 193

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY----- 387
                ++  +  G  A++    Y      + +  ++ +   +  ++      +       
Sbjct: 194 YFEETKLPAIHVGDPASI----YLMGVASEIRGHVQSVAGGVEDRERAGGDAQLANVNPA 249

Query: 388 ----------EVILKITDLAFSDNNIELRNGFPAEVLF--TAKNTTL 422
                      V + I  +      + L  G  A V     A + T+
Sbjct: 250 FTWVRLAQRIPVRIAIDSV---PPGVRLVPGQTASVEIHARAGDVTV 293



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 59/158 (37%), Gaps = 6/158 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLI--TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +K+  P     +T   + GI+  I   W +   IE      G++  +  VV I    SG+
Sbjct: 1   MKQIIPLLRTVLTAAILAGIVAAIYGLW-VRYQIEPLTR-DGKVRAD--VVPIAPDVSGL 56

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +   +V +  ++ +G  LL  +       ++    ++ + +  +D             DV
Sbjct: 57  VTDVRVHDNQKVTKGQVLLVIDPSRYRIALEQADANLASEQAELDEAIREDRRNRAMPDV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           + +    +    ++ L    +      +    ++ R+L
Sbjct: 117 VAEESAQQGATRVEKLRAALAQAHSARDLAALNLERTL 154


>gi|291613955|ref|YP_003524112.1| efflux transporter, RND family, MFP subunit [Sideroxydans
           lithotrophicus ES-1]
 gi|291584067|gb|ADE11725.1| efflux transporter, RND family, MFP subunit [Sideroxydans
           lithotrophicus ES-1]
          Length = 397

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 61/211 (28%), Gaps = 21/211 (9%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L Q E  +  +   L      +        + Y          L    +  +  +  
Sbjct: 100 RAQLQQSEANLASAQASLDLAQANETRARGLFAQEYV-----TRQDLDVAVQAFKAAKAQ 154

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVPHSKLTY 329
           F    +++    +  +   I SP++G +V  +             S  L +I        
Sbjct: 155 FDVAQAQVVRDRRNLDNTVIRSPVSGVVVS-RLVDVGQTVAASLQSPTLFQIAQDLSHMQ 213

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I        + +++ G  AT R   + +     F+  + ++    + Q N +        
Sbjct: 214 IDTSYAEADVGNIRVGQHATFRVDAFPNRI---FRGEVRQVRLNPTTQQNVVTYDV---- 266

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                 ++  + +  L  G  A V       
Sbjct: 267 -----VVSVDNLDQALMPGMTAYVNIVVAQR 292



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 64/167 (38%), Gaps = 4/167 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G +     +V + S  SGI+KK   +   Q+  G  LL  +       +   
Sbjct: 48  ITQSVAANGTLNPVV-LVSVGSQVSGIVKKLHADFNDQVKAGQILLELDPTLNRAQLQQS 106

Query: 100 KVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + ++ + +  +D     ++    L  +  V  +  +   +       ++    ++V    
Sbjct: 107 EANLASAQASLDLAQANETRARGLFAQEYVTRQDLDVAVQAFKAAKAQFDVAQAQVVRDR 166

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +     ++  ++ +    L  +     +SL    L    +DL+ M+
Sbjct: 167 RNLDNTVIRSPVSGVVVSRLVDVGQTVAASLQSPTLFQIAQDLSHMQ 213


>gi|261380110|ref|ZP_05984683.1| macrolide-specific efflux protein MacA [Neisseria subflava NJ9703]
 gi|284797331|gb|EFC52678.1| macrolide-specific efflux protein MacA [Neisseria subflava NJ9703]
          Length = 393

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 85/226 (37%), Gaps = 29/226 (12%)

Query: 24  SIIGIIGLITWSILLP---------------IEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++I       WS++ P               I  +VS++GEI    N+V + +  SG IK
Sbjct: 12  AVIVAAAFGGWSLMKPEPQSSFITEVVKLGDIRQTVSATGEISPS-NLVSVGAEASGQIK 70

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K  V+ G Q+ +G  +   +     + ++ +K  ++  +  + + + AL     KY    
Sbjct: 71  KLYVKLGQQVKKGDLIAEIDSTNQLNTLNTEKSKLETYQAKLVSAEIALSSAEKKYKREL 130

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLD------ 180
             ++ +     D      S  +   N     +S+ +S     T    +   R+       
Sbjct: 131 ALWKEQATSKEDLESAQDSLAAAKANVAELKASIKQSKISINTAESELGHTRITATMDGT 190

Query: 181 -----LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                +E   S+  A  +     L  ++ +  K  +++ D+ + + 
Sbjct: 191 VVAIPVEEGQSVNAAQSTPTIIQLANLETMLNKMQIAEGDITKVKA 236



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 82/263 (31%), Gaps = 31/263 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A + S  +  T+           ++ L   +  
Sbjct: 60  SVGAEASGQIKKLYVKLGQQVKKGDLIAEIDSTNQLNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K  L          E      + L     ++ + + +       +
Sbjct: 112 LVSAEIALSSAEKKYKRELALWKEQATSKEDLESAQDSLAAAKANVAELKASIKQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPK 337
              E       I + + GT+V             +Q    ++++  + +    + ++   
Sbjct: 172 NTAESELGHTRITATMDGTVVAIPV-EEGQSVNAAQSTPTIIQLA-NLETMLNKMQIAEG 229

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--------YYEV 389
            I  VK G    + F   ++      KA ++ +DP ++       T          YY  
Sbjct: 230 DITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSLGSYTSSTDTTSNAIYYYA 286

Query: 390 ILKITDLAFSDNNIELRNGFPAE 412
              + +   SD  + +  G   +
Sbjct: 287 RALVPN---SDGKLSI--GMTTQ 304


>gi|254501588|ref|ZP_05113739.1| putative auxiliary transport protein, MFP family [Labrenzia
           alexandrii DFL-11]
 gi|222437659|gb|EEE44338.1| putative auxiliary transport protein, MFP family [Labrenzia
           alexandrii DFL-11]
          Length = 404

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 69/221 (31%), Gaps = 15/221 (6%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           WK L        + + L  I+ +I         P   +       +       + +   G
Sbjct: 20  WKGLPITLYNVHRALFLWFILALIVFFAVFYYYPKSYTGIVPFRTVP------VVAETGG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + +  V+ G  +  G PL + E+      ++L +  I  +   I      +D      D
Sbjct: 74  TVTEVFVKGGDHVTVGEPLFSIENASELAKVELAERKIDEINAAIVAAHFEVDTAEAALD 133

Query: 126 VLEKAFESREEQLLDFL-------GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN- 177
             E A +  E  L D           Y  +  +       +    +    +++ +  +  
Sbjct: 134 AAEAALKQAEITLADHQELKQRKSSAYQPSQFERAQSQRETRSAEVDAATSKLSAAKVQA 193

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNL-FEKNAVSQNDLN 217
              +  +    +A L   Q +L   + L F    V Q  LN
Sbjct: 194 EAIIPAQLESAKASLKQAQLELERTRVLSFVDGIVEQLALN 234


>gi|218893687|ref|YP_002442556.1| hypothetical protein PLES_49751 [Pseudomonas aeruginosa LESB58]
 gi|218773915|emb|CAW29729.1| hypothetical protein PLES_49751 [Pseudomonas aeruginosa LESB58]
          Length = 425

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 52/390 (13%), Positives = 113/390 (28%), Gaps = 90/390 (23%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P+   +   G +     VV + +PF+G ++   VE G ++ +G  LL  +  E    + 
Sbjct: 50  APLVHQIGLVGRLEP-GRVVTLAAPFAGNVEALLVEPGQRVAEGQELLRMDTREIAVQVR 108

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   R  +   +                                           
Sbjct: 109 EAQSALLKARRTLQDLRDW----------------------------------------- 127

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                 +      +RS  L +   E K    R L          + +L ++ +  + DL 
Sbjct: 128 -ERGEDMARVRRALRSAQLAQSSTERKLRETRELFQRGIVPRNELDDLEQQASQQRMDLE 186

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
              R V  +  + +    +   M                        DL      +    
Sbjct: 187 AARREVESTRAKGQGENRQIAEM------------------------DLANASVKYETLQ 222

Query: 278 SKLTILEKTREQKTILSPIAGTIVYN----------QSFSSSNYAQQSQPLMKIVPHSKL 327
           ++L         +T+ +P AG +V            +   + +   Q Q L  +    + 
Sbjct: 223 AQLDG-------RTVRAPFAGIVVAAPGLAGEQGSREPVQAGSKLGQGQALFGLA-SVER 274

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + AKV+   I  +++G    +    +          +I  +            + ++ 
Sbjct: 275 LKVSAKVSELDINQLREGQAVEISGDGFEGTT---LAGVIAALGGQALPGMAQGGSPQF- 330

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           EV + +  L       ++R G  A++  T 
Sbjct: 331 EVTVSVAPLDPRQLQ-KIRLGMSAKLTVTT 359


>gi|150392417|ref|YP_001322466.1| RND family efflux transporter MFP subunit [Alkaliphilus
           metalliredigens QYMF]
 gi|149952279|gb|ABR50807.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
           metalliredigens QYMF]
          Length = 448

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 105/328 (32%), Gaps = 59/328 (17%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+ +G ++ +          S  +    VE G ++ QG  LLT +  +  + +  ++   
Sbjct: 61  VTDTGNVVAKTIRDLYVH-TSMRVTGVMVEVGDEVYQGQTLLTLDTADIENQLKDQQ--- 116

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                               D   +      K+   G      +
Sbjct: 117 ------------------------------------DQYTQKKLHLEKLIQAGEKLKESN 140

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK-NAVSQNDLNQQERI 222
           L   L          ++L+      +  +   Q++    K L+++  A+S N+L   +  
Sbjct: 141 LPEDL----------MNLDKAIQTAQQNVDKAQRNYDNNKVLYDEVGAISANELADAKMS 190

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           +  + ++     + +   +R  N   +  N +  N  ++I       +        ++  
Sbjct: 191 LDSARMDYELAKNNRDKAIRENNRDIENNNRDIENNNRDIEI----TKLDIDMAERRIAE 246

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
           L K     T+ +P  G +     +S    A  SQPL KI          A V     +++
Sbjct: 247 LAKEINMGTVTAPSDGIVTEL-YYSEGMTANTSQPLYKIADIQGGFQFIATVNISAGEYL 305

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKI 370
           + G TA +      +      +  + +I
Sbjct: 306 EVGDTAEISINSLNNRN---IQGKVNQI 330


>gi|45656390|ref|YP_000476.1| heavy metal efflux pump [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45599624|gb|AAS69113.1| heavy metal efflux pump [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 497

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 65/383 (16%), Positives = 139/383 (36%), Gaps = 54/383 (14%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +V +SG I   + V ++ S  SG I+K   + G +I Q   L   E +     +  +
Sbjct: 87  ITPTVEASGMIDFIEKV-DVYSKVSGRIEKVYFKEGEEISQNQRLFKMETLPLELELLKQ 145

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++++ +  +   K    +L  K +VL K  E  +   +    K     +K    GI  
Sbjct: 146 ESTLESSKSQVKLAKE--KYLKAKNNVLAKIQEYEKSLSVLEKSKQEYEKAKNSFAGIEE 203

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +Y +         +  LN    E    +    +      LT  K++   N          
Sbjct: 204 IYNAGGFTKEEFENAKLNLNSKETSYQIAEKDVEIRSIGLTD-KDILRNNY--------- 253

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                    +L +   E+  +L  IN L ++A  E A             +  +    ++
Sbjct: 254 ---------KLPQTKEERTTILEEINSLIEKAEWEVA-------------EGVYKSHEAQ 291

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ---QSQPLMKIVPHSKLTYIRAKVTP 336
           +   +   ++  + SP+ G I   Q  +           Q ++ ++   ++  +   +  
Sbjct: 292 VNSTKMMLKESLVFSPLTGVISK-QFKTEGEILSGSGPGQHVVSVINVKQVYAV-LNIPE 349

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
            +  ++KKG    V F      + ++F+ +++ + PI+ Q+ +           ++I  L
Sbjct: 350 SESINLKKGMK--VSFLA-DVYKGQQFQGMVQLLSPIVDQKSHT----------VEIKAL 396

Query: 397 AFSDNNIELRNGFPAEVLFTAKN 419
             + N + L+ G       T   
Sbjct: 397 VDNKNKL-LKPGMFIRANITTGQ 418


>gi|15600425|ref|NP_253919.1| hypothetical protein PA5232 [Pseudomonas aeruginosa PAO1]
 gi|107104334|ref|ZP_01368252.1| hypothetical protein PaerPA_01005409 [Pseudomonas aeruginosa PACS2]
 gi|254243886|ref|ZP_04937208.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296392090|ref|ZP_06881565.1| putative membrane fusion protein [Pseudomonas aeruginosa PAb1]
 gi|9951540|gb|AAG08617.1|AE004935_14 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|126197264|gb|EAZ61327.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 357

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 83/305 (27%), Gaps = 19/305 (6%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            + L     +  V E  F    E +     +            +     +     + +  
Sbjct: 53  AAKLPGRVAEIKVDEGDFVKAGEIVARMDTQVLEAQLAQAQAQVRQAENAKLTATSLVAQ 112

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               +   +   +  +A L++ QK  T  + L ++NA+ Q  L+     +  +   L   
Sbjct: 113 RESEKSTAQAVVAQRQAELTAAQKRFTRTEALVKRNALPQQQLDDDRATLQSAQAALSAA 172

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +  +    I     +                 + Q       + +  L+   +   + 
Sbjct: 173 RSQVISAQAAIEAGRSQVI---------------EAQSAIEAAKASVARLQADIDDSLLK 217

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G + Y +             L+ +V      Y+   +   Q   V  G    +   
Sbjct: 218 APRNGRVQY-RVAQPGEVLPAGGKLLNMV-DLADVYMTFFLPSMQAGRVGLGQEVRLVID 275

Query: 354 HYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              D       + +  +     +  +  N + +  + V  ++           ++ G P 
Sbjct: 276 AVPDYVIPAKVSYVASVAQFTPKTVETANEREKLMFRVKARLDPALLEKYITYVKTGVPG 335

Query: 412 EVLFT 416
                
Sbjct: 336 MAYLR 340



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 83/228 (36%), Gaps = 10/228 (4%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSG 65
           +K+     L R  +++ +  +G++ W +  P    E   S +G I   +  V++ +   G
Sbjct: 1   MKQESKRWLSRALIVAALLGVGVLVWQVSRPTGLGEGFASGNGRIEATE--VDVAAKLPG 58

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + + +V+ G  +  G  +   +       +   +  ++       T  S +    ++  
Sbjct: 59  RVAEIKVDEGDFVKAGEIVARMDTQVLEAQLAQAQAQVRQAENAKLTATSLVAQRESEKS 118

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             +     R+ +L     ++  T + V    +    + L      ++S         ++ 
Sbjct: 119 TAQAVVAQRQAELTAAQKRFTRTEALVKRNALPQ--QQLDDDRATLQSAQAALSAARSQV 176

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
              +A + + +  +   ++  E    ++  + + +  +  S L+   N
Sbjct: 177 ISAQAAIEAGRSQVIEAQSAIE---AAKASVARLQADIDDSLLKAPRN 221


>gi|332291769|ref|YP_004430378.1| efflux transporter, RND family, MFP subunit [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332169855|gb|AEE19110.1| efflux transporter, RND family, MFP subunit [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 408

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/330 (11%), Positives = 95/330 (28%), Gaps = 58/330 (17%)

Query: 88  EDIETTDLIDLKKVSIKNLRCH-IDTEKSALDFLNNKYDVLEKAFES---REEQLLDFLG 143
           +  E     +  + ++       +       D L  + D L +   S        L+   
Sbjct: 37  DTEENNSEGETGQENLNEGEAQEVMLTAQQFDALQMEIDTLAQRNMSGYVEANGTLEVPP 96

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL----NRLDLENKSSLLRALLSSHQKDL 199
           +  +  + +    ++S+      ++ + +++      + + +++      +     +++ 
Sbjct: 97  QNEANITALAGANVASIEVIEGDEVKKNQAVAYLSHPSIIQIQSDYLNAYSNSKFLKQEY 156

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              K L+E    S  +  +       ST  ++    + +    + + + +    +     
Sbjct: 157 ERQKRLYEAGVASGMNFQKATADYQSSTAMVKGLEAQLRQYNINTSGVRNGTIYQ----- 211

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                                           + SPIAG +      +   Y +    LM
Sbjct: 212 -----------------------------SVALRSPIAGVVEKVFIKT-GQYVEPQTNLM 241

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +IV  +   +    V  K +  VKKG    VRF        K+ +A I  +     Q   
Sbjct: 242 QIV-DTDHVHADLMVFEKDVDKVKKGQK--VRFS-IQSRPGKELEAEIYSVSQTFEQDPK 297

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            +                  +    L  G 
Sbjct: 298 AVHVH-----------AEIENKGGGLIPGM 316


>gi|332285124|ref|YP_004417035.1| hypothetical protein PT7_1871 [Pusillimonas sp. T7-7]
 gi|330429077|gb|AEC20411.1| hypothetical protein PT7_1871 [Pusillimonas sp. T7-7]
          Length = 443

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 40/126 (31%), Gaps = 4/126 (3%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             LP+     + GE+    ++  I +P  G++K   V     +  G  L + +D    + 
Sbjct: 191 CFLPVRQRALAPGEVT-SLDLEVISAPLDGVVKAIHVRPNQLVQAGQLLFSLDDTTLRNR 249

Query: 96  IDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +   ++                 +    +  VL    E R  +L     +      + 
Sbjct: 250 QAVASRAVAVADAEYLAAAQTAFRSEESRARLTVLHSRAEERRAELASIRSQLQRLEQRA 309

Query: 153 FNYGIS 158
              G++
Sbjct: 310 PRSGVA 315



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 69/232 (29%), Gaps = 19/232 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V  N L Q  ++++        N     +    + +    A  + A   +E    L   
Sbjct: 225 HVRPNQLVQAGQLLFSLDDTTLRNRQAVASRAVAVADAEYLAAAQTAFRSEESRARLTVL 284

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS-SSNYAQQSQPLMKIV-PHSKL 327
                +  ++L  +    ++    +P +G  V+              + +M++  P    
Sbjct: 285 HSRAEERRAELASIRSQLQRLEQRAPRSGVAVFTDVNEWIGKPVVTGERIMQLADPDQPA 344

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             I  ++       +  G +  +       +  +  K +  KI     +     +    Y
Sbjct: 345 MLI--QLPASDAISLDIGASVDM------YLTVRPLKPLRGKIIETSYEAALTPEGVPSY 396

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL-AQEIIHPITDNWPKIF 438
            +   I +   +   ++           +   +TL  + I  P+     + F
Sbjct: 397 RLRASIDEGEGARIGLK------GAARLSGGESTLGFEMIRRPL--AALRAF 440


>gi|330819777|ref|YP_004348639.1| secretion protein [Burkholderia gladioli BSR3]
 gi|327371772|gb|AEA63127.1| secretion protein [Burkholderia gladioli BSR3]
          Length = 362

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 54/162 (33%), Gaps = 9/162 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NV  I    SG + +  V + + +  G PL+  +  + T  +D  +  +   +  + 
Sbjct: 58  VGGNVTVISPRVSGYVARVLVADNALVHAGQPLIELDPADFTARLDAAQAEVDAAKAALT 117

Query: 112 TEKSALDFLNNKYDVLEK---------AFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
              +    +       +           F +R+ +    L + HS   +      +S+ +
Sbjct: 118 RLDAQHQLVEADIAQAQAQADVDTASLQFANRDAERYSNLAESHSGTQQDSQRAQTSLDQ 177

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           +         ++   R  L    +      +  ++   +M+N
Sbjct: 178 ARARVRASAAAVNAQRRQLTVIEAQKVEAQARVEQAQALMRN 219



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 74/225 (32%), Gaps = 17/225 (7%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V + A     + L++      +         + +   +L     + + +  +    + ++
Sbjct: 78  VADNALVHAGQPLIELDPADFTARLDAAQAEVDAAKAALTRLDAQHQLVEADIAQAQAQA 137

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            +  A L    +D     NL E ++ +Q D  + +  + ++   +R +        R + 
Sbjct: 138 DVDTASLQFANRDAERYSNLAESHSGTQQDSQRAQTSLDQARARVRASAAAVNAQRRQLT 197

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                           I     + Q       + +          T+ +P+ G +  N+S
Sbjct: 198 V---------------IEAQKVEAQARVEQAQALMRNARLDNGYTTLYAPVDGYV-GNRS 241

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
                Y      LM +VP     +I A     QI+H++ G    +
Sbjct: 242 AHPGTYVAAGTQLMSLVPAKG-LWIDANFKEDQIRHMRMGQAVEI 285


>gi|297531096|ref|YP_003672371.1| biotin/lipoyl attachment domain-containing protein [Geobacillus sp.
           C56-T3]
 gi|297254348|gb|ADI27794.1| biotin/lipoyl attachment domain-containing protein [Geobacillus sp.
           C56-T3]
          Length = 314

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 15/129 (11%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P AGTI         +     Q +  +  +     ++ +V    I  VK G TA ++
Sbjct: 98  IEAPAAGTITSLDV-EEGDRVNDGQVVAHLT-NYSDLQVKVQVDELDIPKVKVGQTAAIK 155

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              + +         +  I    +++         ++V + I        N+++  G  A
Sbjct: 156 INAFPEATY---TGKVTSI----AKEGTVSNGVSTFDVTVHID----KPTNVKI--GMTA 202

Query: 412 EVLFTAKNT 420
           EV    +  
Sbjct: 203 EVSILVEKK 211



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 11/72 (15%)

Query: 39  PIEISVSSSGEILNEDNVVE--------IKSPFSGIIKKFQVENGSQILQGTPLLTF--- 87
            ++  + S GE + +   +         I++P +G I    VE G ++  G  +      
Sbjct: 70  EVDEVLVSEGETVTKGEDLITFTDGSDPIEAPAAGTITSLDVEEGDRVNDGQVVAHLTNY 129

Query: 88  EDIETTDLIDLK 99
            D++    +D  
Sbjct: 130 SDLQVKVQVDEL 141


>gi|256221671|ref|NP_001157771.1| plectin isoform 1hij [Rattus norvegicus]
 gi|256221739|ref|NP_001157774.1| plectin isoform 1hij [Rattus norvegicus]
 gi|256221753|ref|NP_001157777.1| plectin isoform 1hij [Rattus norvegicus]
          Length = 4387

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +     +
Sbjct: 1183 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEEVT 1242

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++         +  +++ K+  + A   S  +    ++       
Sbjct: 1243 RREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIR------- 1295

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1296 VVRLQLETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1354

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1355 AELALRVKAEAEAAREKQR 1373



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2023 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2076

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2077 MEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAARLRQL 2136

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   EQ   L+   E  
Sbjct: 2137 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ---EQARRLQEDKEQM 2193

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +  +E     +       Q Q   + E  +L +      +    +   
Sbjct: 2194 AQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2242



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL++    +  T        +   
Sbjct: 2160 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLVEETQGFQRTLEAERQRQLEMS 2219

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2220 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2277

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFAD 275
            R       E LRE I E +     + +      L+         ++I ++ +  Q++F  
Sbjct: 2278 RQQSDQDAERLREAIAELEREKEKLKQEAKLLQLKSEEMQTVQQEQILQETQALQKSFLS 2337

Query: 276  EMSKLTILEKTREQ 289
            E   L   E+  EQ
Sbjct: 2338 EKDSLLQRERFIEQ 2351



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + D  ++  E+  E       +  +   +          R 
Sbjct: 1480 EALRLRLQAEEVAQQKSLAQADAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1539

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
            L     + R        L  +  L+R  L +  +     + L E+     Q++     + 
Sbjct: 1540 LAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEATAATQK 1589

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   EL +   E + +L       +E+        + +  +     R  A+E ++L  
Sbjct: 1590 RQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-AGRFRELAEEAARLRA 1648

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1649 LAEEAKRQRQLAEED 1663



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2072 SVRVQMEELGKLKARIEAENRALILRDKDNTQRFLEEEAEKMKQVAEEAARLSVAAQEAA 2131

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKN 204
               ++    ++      +  L            L+ ++ LL+      Q+    L   K 
Sbjct: 2132 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2191

Query: 205  LFEKNAVSQ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +  V +        + ER          E +  +   +       +E    F    +
Sbjct: 2192 QMAQQLVEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2251

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2252 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2282



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/181 (11%), Positives = 51/181 (28%), Gaps = 6/181 (3%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  +  +  + E+      E+L +              +  +     L+ +  + R    
Sbjct: 1181 LRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAELEARELQRRMQEE 1240

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                 E      +   S  ++   + ++   +       +   ER   +   E+R    +
Sbjct: 1241 VTRREEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKAQQVEAAERSRMRIEEEIRVVRLQ 1300

Query: 237  QKNMLRHINELYDEANL------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +   R      DE         E     ++   + E+ +R   DE  +    E     +
Sbjct: 1301 LETTERQRGGAEDELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEAELALR 1360

Query: 291  T 291
             
Sbjct: 1361 V 1361



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 68/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1391 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEA 1450

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+    +    +  
Sbjct: 1451 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQADAEKQKEEAE 1510

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1511 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1570

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1571 LLEEELARLQHEATAATQKRQELEAELAKVRAEMEVLLASKARA 1614



 Score = 40.0 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 67/218 (30%), Gaps = 15/218 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTC 149
            T  L  + + +       I  ++   +    +    ++AF+ R  EEQ            
Sbjct: 1676 TEKLAAISEATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERL 1735

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-------------LLSSHQ 196
            +++     S + R   +    +R       ++    +                  + S+ 
Sbjct: 1736 AQLRKASESELERQKGLVEDTLRQRRQVEEEIMALKASFEKAAAGKAELELELGRIRSNA 1795

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +D    K L E+ A  Q  L  +E    +   E  +     +       ++  E      
Sbjct: 1796 EDTMRSKELAEQEAARQRQLAAEEEQRRREAEERVQRSLAAEEEAARQRKVALEEVERLK 1855

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++E  R  E+ ++  A ++       + R Q    +
Sbjct: 1856 AKVEEARRLRERAEQESARQLQLAQEAAQKRLQAEEKA 1893



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1296 VVRLQLETTERQRGGAEDELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1349

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   +L  E     LR   +   + + +  
Sbjct: 1350 KRQAEAE--LALRVKAEAEAAREKQRALQALDELKLQAEEAERRLRQAEAERARQVQVAL 1407

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1408 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVTVTQLREEAERRAQQQAEAERARE 1465

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1466 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1497


>gi|257487329|ref|ZP_05641370.1| HlyD family secretion protein [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|331009065|gb|EGH89121.1| HlyD family secretion protein [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 388

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 4/188 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V+ G Q+  G  L T ED      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVKEGQQVKAGELLATLEDRSIRASLEQARAQL 113

Query: 104 KNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +  +D  +  L     L     +  + F+ ++  +           + +    +   
Sbjct: 114 AQSKAQLDVAQLDLKRYRQLTQDNGISRQTFDQQQALVRQLEATAKGNEASINASQVQLS 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y  ++  +T    I         + S    L S  Q D   ++    +  +        E
Sbjct: 174 YTQIRSPVTGRVGIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAE 233

Query: 221 RIVYKSTL 228
           R       
Sbjct: 234 RSAATVKA 241



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 77/252 (30%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L ++       +   E +       +R ++ + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVKEG----QQVKAGELLATLEDRSIRASLEQARAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTQDNGISRQTFDQQQALVRQLEATAKGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P     + +   A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAERSAA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TV+              +  +  ID  +S     ++               F +   +L 
Sbjct: 238 TVKAYQGDGAANGLLLGEGTLSLIDNQVSATTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|154243801|ref|YP_001409374.1| RND family efflux transporter MFP subunit [Xanthobacter
           autotrophicus Py2]
 gi|154162923|gb|ABS70138.1| efflux transporter, RND family, MFP subunit [Xanthobacter
           autotrophicus Py2]
          Length = 316

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 67/221 (30%), Gaps = 25/221 (11%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V +       +    +       + + K  L    +L +   +   N  ++    L Q  
Sbjct: 79  VDRERFAIALKQAEAAVEGRAATLEQAKRDLARYTQLRERQVVSPQNA-EQAQTALTQAD 137

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
             +   +S+  +     E+  I +P  G +   +     +Y    + ++ +V  +    +
Sbjct: 138 AAYQQAVSERDLARLNLERSEIKAPANGIVTNLELR-RGDYVSTGKAVVALV-DTDSLRV 195

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ------ 384
                  ++  +  G   T+R      +     +  ++ +   I  ++    T       
Sbjct: 196 EGYFEETKLPRIHVGDPVTIRLMGEPTL----LRGRVQSVAAAIEDRERTAGTGLLANIN 251

Query: 385 ---------EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                    +   V + + D+     +I L  G  A V   
Sbjct: 252 PTFNWVRLAQRVPVRIALEDV---PPDIRLVAGLTATVEIK 289



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 59/168 (35%), Gaps = 5/168 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV I    SG++ +  V + + + +G  L   +       +   + +++     ++
Sbjct: 44  VRADVVGIAPDVSGLVSEVLVRDNAAVKKGDALFRVDRERFAIALKQAEAAVEGRAATLE 103

Query: 112 TEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             K  L     L  +  V  +  E  +  L      Y    S+     ++     +K   
Sbjct: 104 QAKRDLARYTQLRERQVVSPQNAEQAQTALTQADAAYQQAVSERDLARLNLERSEIKAPA 163

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
             + +    R    +  S  +A+++    D   ++  FE+  + +  +
Sbjct: 164 NGIVTNLELRRG--DYVSTGKAVVALVDTDSLRVEGYFEETKLPRIHV 209


>gi|152973229|ref|YP_001338375.1| putative secretion protein [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|330013787|ref|ZP_08307791.1| auxiliary transport protein, membrane fusion protein family protein
           [Klebsiella sp. MS 92-3]
 gi|150958078|gb|ABR80108.1| putative secretion protein [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|328533350|gb|EGF60095.1| auxiliary transport protein, membrane fusion protein family protein
           [Klebsiella sp. MS 92-3]
          Length = 355

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 79/217 (36%), Gaps = 24/217 (11%)

Query: 17  LKRMTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
             R   +SI   +G+  W I+     P+    +    +    + V      SG +    V
Sbjct: 8   FARWVRVSIAAFLGIFAWFIVADIWIPLTPDSTVMRVVTPVSSRV------SGYVSHVYV 61

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            N SQ+ +G  L   +     + ++  +++++     +  ++        + ++    + 
Sbjct: 62  HNNSQVKKGDLLYELDPTPFINKVEAAQIALEQ--AKLSNQQLDAQIAAARANLRTAQYT 119

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSV-------YRSLKMKLTRMRSIYLNRLDLENKS 185
           +R +++     +  ST   V    +  V        +S+     +++++ + R + ++K 
Sbjct: 120 ARNDKVTLDRYQRLSTMQNVSQSDLDKVRTTWQTSEQSVSALNAQIQNLLIQRGERDDKR 179

Query: 186 ----SLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLN 217
                  R  L   Q +L   K   E    VS   LN
Sbjct: 180 NVTLQKYRNALEEAQLNLAWTKVRAETDGMVSNLQLN 216



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 45/154 (29%), Gaps = 18/154 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   + +   +L+      + +              +    + +  L   + L     VS
Sbjct: 81  FINKVEAAQIALEQAKLSNQQLDAQIAAARANLRTAQYTARNDKVTLDRYQRLSTMQNVS 140

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q+DL++       S   +     + +N+L    E  D+ N+    Y       LE+ Q  
Sbjct: 141 QSDLDKVRTTWQTSEQSVSALNAQIQNLLIQRGERDDKRNVTLQKYRN----ALEEAQLN 196

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            A                 + +   G +   Q  
Sbjct: 197 LA--------------WTKVRAETDGMVSNLQLN 216


>gi|83592195|ref|YP_425947.1| secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
 gi|83575109|gb|ABC21660.1| Secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
          Length = 402

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 66/204 (32%), Gaps = 20/204 (9%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R+++     L          L+  ++D    + L    AVS 
Sbjct: 96  RLALDQAEATLAETVRQVRALFSQDGVLAATVLAQETTLARLREDFARRQRLANTGAVSA 155

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            ++      V +++  L     +Q+     I+     ++   A    ++           
Sbjct: 156 EEVKHARDAVTQASAHLAGARKQQEANRVLIDMTGLTSHPRVARAAAQVRE--------- 206

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                          +  + +P++G +   ++           PLM I+P  +  ++ A 
Sbjct: 207 ---------AYVAWRRTVVPAPVSGQVAR-RAVQVGQRTTPGTPLMAIIPLDE-VWVDAN 255

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD 357
               Q+  ++ G    +    Y D
Sbjct: 256 FKEGQLGAMRLGQPVLLTADIYGD 279



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/217 (11%), Positives = 69/217 (31%), Gaps = 14/217 (6%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           S   +T +++    G+  W      ++S           N++++    +G +     ++ 
Sbjct: 23  SAAALTFIALGAAYGIYWW-TTARFDMSTD---NAYVAGNIIQVSPQIAGTVTAVHADDT 78

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS-----ALDFLNNKYDVLEKA 130
             +  G  L+T +  +    +D  + ++      +    S     A   L  +  +    
Sbjct: 79  DFVEAGQMLVTIDPTDARLALDQAEATLAETVRQVRALFSQDGVLAATVLAQETTLARLR 138

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRLDLENKSSLL 188
            +    Q L   G   +   K     ++     L     +  +  + ++   L +   + 
Sbjct: 139 EDFARRQRLANTGAVSAEEVKHARDAVTQASAHLAGARKQQEANRVLIDMTGLTSHPRVA 198

Query: 189 RALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQERI 222
           RA     +  +   + +        V++  +   +R 
Sbjct: 199 RAAAQVREAYVAWRRTVVPAPVSGQVARRAVQVGQRT 235


>gi|56476637|ref|YP_158226.1| cation efflux system transmembrane protein [Aromatoleum aromaticum
           EbN1]
 gi|56312680|emb|CAI07325.1| cation efflux system transmembrane protein [Aromatoleum aromaticum
           EbN1]
          Length = 519

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 69/192 (35%), Gaps = 20/192 (10%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                     L+  +   D    E A  L   +R+  QN +  A    K  I +    ++
Sbjct: 173 ASEELRIAERLQRDSATTDPIASEAARRLANATRERLQNWQVAAAREGKGEIAQ----RQ 228

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           T  SP  G ++   +          + + +I   SK+  I A +  + +  V+ G  A+V
Sbjct: 229 TFHSPANGVVLEKNAV-QGARFMPGEAVYRIADLSKVWVI-ADIFERDLARVRVGQPASV 286

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
               + D R   F A +  + P ++ +  +        + L++ +         LR G  
Sbjct: 287 TLDAFPDRR---FDAKVGYLYPTLNVETRST------RIRLELDNREGL-----LRPGMF 332

Query: 411 AEVLFTAKNTTL 422
           A V   + + T 
Sbjct: 333 AHVELASGSPTP 344


>gi|116053379|ref|YP_793704.1| hypothetical protein PA14_69090 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894334|ref|YP_002443204.1| putative membrane fusion protein [Pseudomonas aeruginosa LESB58]
 gi|254238071|ref|ZP_04931394.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|115588600|gb|ABJ14615.1| putative membrane fusion protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126170002|gb|EAZ55513.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|218774563|emb|CAW30380.1| putative membrane fusion protein [Pseudomonas aeruginosa LESB58]
          Length = 357

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/305 (10%), Positives = 83/305 (27%), Gaps = 19/305 (6%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            + L     +  V E  F    E +     +            +     +     + +  
Sbjct: 53  AAKLPGRVAEIKVDEGDFVKAGEIVARMDTQVLEAQLAQAQAQVRQAENAKLTATSLVAQ 112

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               +   +   +  +A L++ QK  T  + L ++NA+ Q  L+     +  +   L   
Sbjct: 113 RESEKSTAQAVVAQRQAELTAAQKRFTRTEALVKRNALPQQQLDDDRATLQSAQAALSAA 172

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +  +    I     +                 + Q       + +  L+   +   + 
Sbjct: 173 RSQVISAQAAIEAGRSQVI---------------EAQSAIEAAKASVARLQADIDDSLLK 217

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G + Y +             L+ +V      Y+   +   Q   V  G    +   
Sbjct: 218 APRNGRVQY-RVAQPGEVLPAGGKLLNMV-DLADVYMTFFLPSMQAGRVGLGQEVRLVID 275

Query: 354 HYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              D       + +  +     +  +  N + +  + V  ++           ++ G P 
Sbjct: 276 AVPDYVIPAKVSYVASVAQFTPKTVETANEREKLMFRVKARLDPALLEKYITYVKTGVPG 335

Query: 412 EVLFT 416
                
Sbjct: 336 MAYLR 340



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 83/228 (36%), Gaps = 10/228 (4%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSG 65
           +K+     L R  +++ +  +G++ W +  P    E   S +G I   +  V++ +   G
Sbjct: 1   MKQESKRWLSRALVVAALLGVGVLVWQVSRPTGLGEGFASGNGRIEATE--VDVAAKLPG 58

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + + +V+ G  +  G  +   +       +   +  ++       T  S +    ++  
Sbjct: 59  RVAEIKVDEGDFVKAGEIVARMDTQVLEAQLAQAQAQVRQAENAKLTATSLVAQRESEKS 118

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             +     R+ +L     ++  T + V    +    + L      ++S         ++ 
Sbjct: 119 TAQAVVAQRQAELTAAQKRFTRTEALVKRNALPQ--QQLDDDRATLQSAQAALSAARSQV 176

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
              +A + + +  +   ++  E    ++  + + +  +  S L+   N
Sbjct: 177 ISAQAAIEAGRSQVIEAQSAIE---AAKASVARLQADIDDSLLKAPRN 221


>gi|319953299|ref|YP_004164566.1| efflux transporter, rnd family, mfp subunit [Cellulophaga algicola
           DSM 14237]
 gi|319421959|gb|ADV49068.1| efflux transporter, RND family, MFP subunit [Cellulophaga algicola
           DSM 14237]
          Length = 389

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 90/264 (34%), Gaps = 19/264 (7%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM-----------KLTR 170
           +K   +E    S   + +           ++ +  I  +  +L              +T 
Sbjct: 20  DKKKSVEDVIASTNPEEIRTKRAELVGDQEIIHDKIKQLDEALAQYDTVKKVPLITTITA 79

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
              ++ + L+L+   +    L+ + + +  +     ++       +++ + +       L
Sbjct: 80  KEELFNHYLELQGNVTTKSLLVITPEYNGILTNIYVKEG----QKVSKGQILGKIDDGGL 135

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            + + + + +   + +   E      +          Q + T+  +   +  L++   + 
Sbjct: 136 SQQVAQLE-IQAELAKTTFERQKRLWDQQIGSEIQFLQAKSTYEAQSRAVAQLQQQIAKT 194

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            I +P +GTI  +      +     Q  +M+IV +    YI   V    I ++ KG    
Sbjct: 195 VIRAPFSGTI-DDVITEQGSVVAAGQSQIMRIV-NLDNMYIETDVPENYITNISKGKNVE 252

Query: 350 VRFPHYADIREKKFKAIIEKIDPI 373
           V FP        K +   + I+P 
Sbjct: 253 VEFPILGKTISTKIRQAGDFINPT 276



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 55/141 (39%), Gaps = 5/141 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +  +  ++ I   ++GI+    V+ G ++ +G  L   +D   +  +   ++  +  
Sbjct: 91  QGNVTTKS-LLVITPEYNGILTNIYVKEGQKVSKGQILGKIDDGGLSQQVAQLEIQAELA 149

Query: 107 RCHIDTEKSALDFL---NNKYDVLEKAFESREEQLLDFLGKYHSTCSKV-FNYGISSVYR 162
           +   + +K   D       ++   +  +E++   +     +   T  +  F+  I  V  
Sbjct: 150 KTTFERQKRLWDQQIGSEIQFLQAKSTYEAQSRAVAQLQQQIAKTVIRAPFSGTIDDVIT 209

Query: 163 SLKMKLTRMRSIYLNRLDLEN 183
                +   +S  +  ++L+N
Sbjct: 210 EQGSVVAAGQSQIMRIVNLDN 230


>gi|170726253|ref|YP_001760279.1| multidrug resistance efflux pump-like protein [Shewanella woodyi
           ATCC 51908]
 gi|169811600|gb|ACA86184.1| multidrug resistance efflux pump-like protein [Shewanella woodyi
           ATCC 51908]
          Length = 331

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 99/280 (35%), Gaps = 24/280 (8%)

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-LLSSHQKDLTMMKNLFE 207
               + Y I  +    ++       +  ++  ++N+   L A LL    ++ +   +L  
Sbjct: 55  AGDAWRYQIQWMMPEGEIAEPGQVVVIFDKTQIDNQIEQLEASLLRVTAQEQSTSIDLKA 114

Query: 208 KNAVSQNDLNQQERIVYKSTLEL--------RENIHEQKNMLRHINELYDEANLEFANYL 259
               ++ DL Q+E    KS L+          +   E +  L   N    +A       L
Sbjct: 115 SVLQAKFDLKQKETERDKSQLDADVPADYIAAKEYAENQFKLMQANSELIKAEQALKEVL 174

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY------NQSFSSSNYAQ 313
            + S    Q     +    +L       EQ T+ + I G ++Y      ++ ++  +  Q
Sbjct: 175 DKQSASKAQLAIDRSRAQLELQQALDGIEQLTLKAEIKGPLLYSSEPWSDKKYAVGDTVQ 234

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             + +  + P  +   + A V    +  ++     T+R    +++    F   I+ I   
Sbjct: 235 IGRQVASL-PAMEELEVVAWVNEVDVDKIEPSSRVTLRLDSQSNMT---FSGQIKSIGR- 289

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            +Q+        +++V +  T     D  +++  G    V
Sbjct: 290 QAQKQAAWGNSNWFKVEISFTP----DEKVKIIPGMSVLV 325



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 75/224 (33%), Gaps = 10/224 (4%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF--LNNKYDVLEKAF 131
            G     G  ++ F+  +  + I+  + S+  +     +    L    L  K+D+ +K  
Sbjct: 69  EGEIAEPGQVVVIFDKTQIDNQIEQLEASLLRVTAQEQSTSIDLKASVLQAKFDLKQKET 128

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYR--SLKMKLTRMRSIYLNRLDLENKSSLLR 189
           E  + QL   +   +    +        +     L      ++ +   +   + + ++ R
Sbjct: 129 ERDKSQLDADVPADYIAAKEYAENQFKLMQANSELIKAEQALKEVLDKQSASKAQLAIDR 188

Query: 190 ALLSS-HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +      Q+ L  ++ L  K  +    L   E    K        + +   + R +  L 
Sbjct: 189 SRAQLELQQALDGIEQLTLKAEIKGPLLYSSEPWSDKKYA-----VGDTVQIGRQVASLP 243

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               LE   ++ E+  D  +        +   + +  + + K+I
Sbjct: 244 AMEELEVVAWVNEVDVDKIEPSSRVTLRLDSQSNMTFSGQIKSI 287


>gi|86160570|ref|YP_467355.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85777081|gb|ABC83918.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 458

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 12/196 (6%)

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L + +   + +++  N    E +   +N   E +R     +R  A   + L+      
Sbjct: 153 AQLEQELARVERLVKTGNASAAELDTARSNLGAERARQQAAVER-VAQADAALSEARHAL 211

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
              T+ SPI G I   +  ++    + S   + ++ I+        + +V   ++ +VK+
Sbjct: 212 SLTTLASPIDGVITK-RQKTAGERVRGSDLSEDVVLIISTLSKMEAKIEVGEHEVVYVKE 270

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G TA V    + D +       + +   + +Q      T  +  V L +     +     
Sbjct: 271 GDTAEVEIDAFPDQKFPATVVEVARNATVKNQGTEGEVTTFF--VRLALDHPVQNA---- 324

Query: 405 LRNGFPAEVLFTAKNT 420
              G  A+        
Sbjct: 325 -LPGMSAQASIATDTR 339



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/178 (12%), Positives = 60/178 (33%), Gaps = 11/178 (6%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +   PI   V+++G++     V  + +  SG + +     G  + +G  L   +    T 
Sbjct: 71  AKRGPITRLVTAAGKLQAATEVK-LSANVSGDLLELDAHEGDLVKKGQVLGKVDSRRYTA 129

Query: 95  LIDLKKVSIKNLR----------CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            +  +  +  +              ++ E + ++ L    +      ++    L     +
Sbjct: 130 QVAQQTAARASAAADVELEKVKVAQLEQELARVERLVKTGNASAAELDTARSNLGAERAR 189

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +   +V     +       + LT + S     +    K++  R   S   +D+ ++
Sbjct: 190 QQAAVERVAQADAALSEARHALSLTTLASPIDGVITKRQKTAGERVRGSDLSEDVVLI 247


>gi|148550314|ref|YP_001270416.1| secretion protein HlyD family protein [Pseudomonas putida F1]
 gi|148514372|gb|ABQ81232.1| secretion protein HlyD family protein [Pseudomonas putida F1]
          Length = 319

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 84/302 (27%), Gaps = 24/302 (7%)

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +   + L       E   +    K     ++V      +V R   +     R++   R  
Sbjct: 31  DQLPEGLSMGNGRLEATEVQIASKIPGRLAEVLVDEGDNVTRGQLLARIDTRTMEAQRSQ 90

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            E +    R   ++ Q               +   L Q E ++    L+    I ++K  
Sbjct: 91  AEAEVLRARENYAAAQ---------------ATVQLRQSELLLASQELKRVREIFQRKFA 135

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            + + +            +      L   +       +++  L    +  ++ +PI G I
Sbjct: 136 SQQLLDQQQARFDTANAAVVAARAQLAAIKAAIGAAEAQVAQLTSEIDDSSLRAPINGII 195

Query: 301 VYNQSFSSSNYAQQ-SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
              +            + LM I P  +   +   +       +  G  A +      +  
Sbjct: 196 Q-LRLAEPGEVLGAGGRVLMLIDPSDQYMNL--YLPASTSGRLTVGDQARIVLDALPERA 252

Query: 360 EKKFKAIIEKIDPIISQQ--DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                A +        +Q    + + +  + V L+++D          + G P       
Sbjct: 253 LPAKVAFVAAKAQFTPKQVETRDERQKLVFRVKLRLSDPGAVPQA---KPGMPGAGYVRT 309

Query: 418 KN 419
             
Sbjct: 310 AE 311



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/149 (10%), Positives = 43/149 (28%), Gaps = 2/149 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V+ G  + +G  L   +           +  +   R +    ++ +    ++ 
Sbjct: 57  GRLAEVLVDEGDNVTRGQLLARIDTRTMEAQRSQAEAEVLRARENYAAAQATVQLRQSEL 116

Query: 125 DVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            +  +  +   E  Q      +        F+   ++V  +         +I      + 
Sbjct: 117 LLASQELKRVREIFQRKFASQQLLDQQQARFDTANAAVVAARAQLAAIKAAIGAAEAQVA 176

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             +S +         +  +   L E   V
Sbjct: 177 QLTSEIDDSSLRAPINGIIQLRLAEPGEV 205


>gi|330831252|ref|YP_004394204.1| hypothetical protein B565_3552 [Aeromonas veronii B565]
 gi|328806388|gb|AEB51587.1| hypothetical protein B565_3552 [Aeromonas veronii B565]
          Length = 349

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 110/308 (35%), Gaps = 29/308 (9%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
            A   +  +  ++    +     +    G+  S    +  +   ++  +++ +  R+++I
Sbjct: 61  QAPAIITTEPQLVVANGDGFIRNIYMSPGQAVSQGDALMRFESPTLRANIEGRKARLKAI 120

Query: 175 YLNRLDLENKS-SLLRALLSSHQKDLTMMKNLF-------EKNAVSQNDLNQQERIVYKS 226
            L++   E    S L   +   ++     + ++       ++  VS  +         +S
Sbjct: 121 ELDKSAAEQAILSNLDEQIRIAERGANEQEGIYQEYAGYRKEKLVSSAEYASALLSWTQS 180

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            ++L++   E+      I E  D+     A+   ++ ++L + Q     +          
Sbjct: 181 RIDLQKARSEKMQQELQIKE--DQLTGPLASARHQLVQELTEMQAITRQQQP-------- 230

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                 LSP  G +         ++     PL  I        I A V PK +  +K G+
Sbjct: 231 ------LSPATGKVSDVLV-QEGDWVFSGAPLALIAKREDPLVI-AYVLPKYLSSMKPGH 282

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            A V+ P   +    +    +E  D + +Q     + ++   + + ++       N+++ 
Sbjct: 283 KAIVKLPS-GERLAARVARPVELADKLPAQLAAPFEGEK-ATLKVALSLDEKLPPNLQVE 340

Query: 407 NGFPAEVL 414
            G P  VL
Sbjct: 341 -GLPVTVL 347



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 76/212 (35%), Gaps = 6/212 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           ++   KR    +   + LL     + ++ W  L        +   I  E     + +   
Sbjct: 22  LYAPAKRIAFRARWYLILLLAFSPVIILLW-YLGREWWLTQAPAIITTE--PQLVVANGD 78

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC-HIDTEKSALDFLNNK 123
           G I+   +  G  + QG  L+ FE       I+ +K  +K +       E++ L  L+ +
Sbjct: 79  GFIRNIYMSPGQAVSQGDALMRFESPTLRANIEGRKARLKAIELDKSAAEQAILSNLDEQ 138

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             + E+    +E    ++ G           Y  + +  +      +       + +L+ 
Sbjct: 139 IRIAERGANEQEGIYQEYAGYRKEKLVSSAEYASALLSWTQSRIDLQKARSEKMQQELQI 198

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           K   L   L+S +  L  ++ L E  A+++  
Sbjct: 199 KEDQLTGPLASARHQL--VQELTEMQAITRQQ 228


>gi|260434002|ref|ZP_05787973.1| putative secretion protein HlyD [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260417830|gb|EEX11089.1| putative secretion protein HlyD [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 381

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 67/221 (30%), Gaps = 25/221 (11%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           VF   + +    L       + +  + +          A L+         +NL      
Sbjct: 103 VFKLAVENAQAQLVAAEQNAKILEQDVIAATEAVERANAQLAYAMTQKARYENLVPAGGA 162

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            Q++L++             E + E +  ++       +A L  A+ +  ++  + Q + 
Sbjct: 163 RQDELDRW-----------TEQVTEDQAAVKQAEANLKKAQLAQASQIDGVNTGIVQAKA 211

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTY 329
             A+        +   +  TI +P  G IV  Q+          +   +   V       
Sbjct: 212 QLAE-------AQYFLDNTTIYAPENGMIVSQQAR-PGLVVGDIRLGAIASFVIEDSPYI 263

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           + A    + ++ V+ G    V    Y           +E I
Sbjct: 264 L-ATFRQQNLKFVEPGQPVEVALDLYPGEI---LSGKVEAI 300



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 55/168 (32%), Gaps = 14/168 (8%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L +I ++ L  +         V S+ +I+        +     I+ +  VE  + I +G 
Sbjct: 42  LLLIFLVALRFFQPFSIDSHVVRSTIQIVP----KLTQPT---ILTEVLVEPNTPITKGD 94

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
           PL  F+D          K++++N +  +   +     L        +A E    QL   +
Sbjct: 95  PLYRFDDTVF-------KLAVENAQAQLVAAEQNAKILEQDVIAATEAVERANAQLAYAM 147

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +     + V   G          +        + + +   K + L  
Sbjct: 148 TQKARYENLVPAGGARQDELDRWTEQVTEDQAAVKQAEANLKKAQLAQ 195


>gi|239501001|ref|ZP_04660311.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB900]
          Length = 373

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +  + +++++G+I    W    P    +   G +  E   V + +     I++  V+ G 
Sbjct: 53  IIAVVVIALLGLIIFGLWKSYQP--KPIELQGRVEAET--VHVSTKVPSRIEEIYVQEGQ 108

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           +I +G PL+     E          ++++      T        N   D L   ++S + 
Sbjct: 109 KISKGQPLVRLVSPEIEAKKQQALATLQSALAFQSTVDRGSQQEN--IDTLYANWQSMKA 166

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q  +     +     ++  G+ S  R  +M   +  +  L+    + + +  +   +S Q
Sbjct: 167 Q-ANLAKTTYQRGENLYRQGVISRQRRDEMLAAQTSAQELSEAAYQ-QYARAKRGSTSQQ 224

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIV 223
           K     +    K AVS+    + E  +
Sbjct: 225 KSTADAQVEIAKAAVSEAQALEAETRL 251


>gi|71735138|ref|YP_273464.1| HlyD family secretion protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71555691|gb|AAZ34902.1| HlyD family secretion protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 388

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 71/188 (37%), Gaps = 7/188 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V  G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVNEGQQVKAGELLATLDDRSIRASLEQARAQL 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +D   + LD    +    +     +       L +     +K     I++    
Sbjct: 114 AQSKAQLDV--AQLDLKRYRQLTQDNGISRQTFDQQQALVRQLEATAKGNEASINASQVQ 171

Query: 164 LKMKLTRMRSIYLNRLDLEN--KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           L    T++RS    R+ + N  + + LR   ++    +T +  +  + ++ Q  L   + 
Sbjct: 172 LS--YTQIRSPVTGRVGIRNVDEGNFLRVGDATGLFSVTQIDPIAVEFSLPQQMLPTLQG 229

Query: 222 IVYKSTLE 229
           ++ + +  
Sbjct: 230 LIAERSAA 237



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 75/252 (29%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L  +       +   E +       +R ++ + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVNEG----QQVKAGELLATLDDRSIRASLEQARAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTQDNGISRQTFDQQQALVRQLEATAKGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ +         + +I P +    +  ++ P     + +   A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVGDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAERSAA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TV+              +  +  ID  +S     ++               F +   +L 
Sbjct: 238 TVKAYQGDGAANGLLLGEGTLSLIDNQVSATTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|329901985|ref|ZP_08272997.1| Cobalt/zinc/cadmium efflux RND transporter, membrane fusion
           protein, CzcB family [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548914|gb|EGF33537.1| Cobalt/zinc/cadmium efflux RND transporter, membrane fusion
           protein, CzcB family [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 404

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 33/151 (21%)

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + T+ +P+ G I      +  +      PL++I   +   ++ A++    +  V+ G   
Sbjct: 209 RMTLRAPVDGVITELSIRA-GSTVMAGAPLLRIN-GTSTVWLHAELPESLVARVRPGMAV 266

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           + +         K F   ++ I P I+     L      +V +     A ++    L  G
Sbjct: 267 SAQIAALP---GKTFSGRVDAILPDINAATRTL------KVRI-----ALNNPGAVLVPG 312

Query: 409 F-----------------PAEVLFTAKNTTL 422
                             P E +      T+
Sbjct: 313 MFATLQFSAPAGAPVLLVPTEAVIRTGTRTV 343



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 3/49 (6%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           V+SSG++      + +++P  G+I +  +  GS ++ G PLL      T
Sbjct: 200 VASSGKVQP---RMTLRAPVDGVITELSIRAGSTVMAGAPLLRINGTST 245


>gi|301060017|ref|ZP_07200891.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [delta proteobacterium NaphS2]
 gi|300445896|gb|EFK09787.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [delta proteobacterium NaphS2]
          Length = 334

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/273 (11%), Positives = 79/273 (28%), Gaps = 27/273 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++    ++ +     KA   +  QL++            +    +    +L     +++ 
Sbjct: 40  RANWAAVSPRVKEHVKAVHVKNNQLVNKGDLLIELEEYPYRLVSNVHKATLAQDQAQLKV 99

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
             +           + A      K     K L  + AVS+      E  +   T++L   
Sbjct: 100 TEIKYEMARQTLKSVEAEFKLAVKKRDRFKELVREKAVSKQAYENIETALDNVTIKL--- 156

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                               +    +K     + +         +++ + +       + 
Sbjct: 157 -------------------TQAKENVKYWMAAVAEQATVIDTSRARVALAQYDLSMCRLC 197

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +         +YA   +P+  IV  +   ++ A      +  +K G    ++  
Sbjct: 198 APNPGFVNNMYIR-PGDYAVVGEPMFGIV-ETTEFWVEANYKECYVGKIKPGQKVWIQCD 255

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
            Y       F+  +  I   + + D   Q   Y
Sbjct: 256 LYPSRI---FEGRVVSIGTGVRRSDKPEQALPY 285



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 47/142 (33%), Gaps = 5/142 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K   V+N   + +G  L+  E+     + ++ K ++   +  +   +   +        
Sbjct: 54  VKAVHVKNNQLVNKGDLLIELEEYPYRLVSNVHKATLAQDQAQLKVTEIKYEMARQTLKS 113

Query: 127 LEKAFESREEQLLDF-----LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           +E  F+   ++   F              +     + +V   L      ++       + 
Sbjct: 114 VEAEFKLAVKKRDRFKELVREKAVSKQAYENIETALDNVTIKLTQAKENVKYWMAAVAEQ 173

Query: 182 ENKSSLLRALLSSHQKDLTMMK 203
                  RA ++  Q DL+M +
Sbjct: 174 ATVIDTSRARVALAQYDLSMCR 195


>gi|251797475|ref|YP_003012206.1| chromosome segregation protein SMC [Paenibacillus sp. JDR-2]
 gi|247545101|gb|ACT02120.1| chromosome segregation protein SMC [Paenibacillus sp. JDR-2]
          Length = 1195

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/229 (9%), Positives = 82/229 (35%), Gaps = 12/229 (5%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL--EKAFESRE 135
           + +   +L+ +  E     +  ++  + +R  +    +    L  +  +   ++   + E
Sbjct: 710 VRKEQSILSQKMEELRSQAEQYRIDEQQVRAELQQLNNEAKHLTEQEQLFTADRTNHTAE 769

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +Q +  +        +      + +  ++++   R ++    + +L+ + + L+  ++  
Sbjct: 770 QQSMQDMATEAEVRLEQLTADEARLQEAIRLAEERRKASETAKEELQVQLTDLKISVAKT 829

Query: 196 QKDLTMMKNLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            ++    ++   +       ++ +L     +  +   E+  +  E    +  +N L  + 
Sbjct: 830 DQEKQSFEDQAARVRADIQRAKQELASYRTLFSQQDAEMERHGGETVAQIEQLNHLRLKK 889

Query: 252 NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                          +  ++LEQ +    ++  +L  +E    Q  I +
Sbjct: 890 QECAEQTDLKRSARADRVKELEQGESDTKEQRGQLRQVEDQMRQTEIAA 938



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/218 (10%), Positives = 70/218 (32%), Gaps = 17/218 (7%)

Query: 82  TPLLTFEDIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
                 + +      +  ++      R +   E+ ++  +  + +V  +   + E +L +
Sbjct: 737 QVRAELQQLNNEAKHLTEQEQLFTADRTNHTAEQQSMQDMATEAEVRLEQLTADEARLQE 796

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            + +      K        +   L      +      +   E++++ +RA +   +++L 
Sbjct: 797 AI-RLAEERRKASETAKEELQVQLTDLKISVAKTDQEKQSFEDQAARVRADIQRAKQELA 855

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLEL---------RENIHEQKNMLRHINELYDEA 251
             + LF +         + ER   ++  ++         ++   EQ ++ R       + 
Sbjct: 856 SYRTLFSQQDA------EMERHGGETVAQIEQLNHLRLKKQECAEQTDLKRSARADRVKE 909

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             +  +  KE    L Q +            L+   + 
Sbjct: 910 LEQGESDTKEQRGQLRQVEDQMRQTEIAANRLDVELDN 947



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 73/211 (34%), Gaps = 6/211 (2%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +++  +K +++  +  ++   SA D         E  F +R   L   L +     +   
Sbjct: 305 EVLKERKKNLEQNKKQLEETISAQDERIAALTSEEAEFRNRAAVLELQLAELKQKLAVEE 364

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           N  I     S    +     +    L++ +  + LR  +    +    ++   E+ +  +
Sbjct: 365 NNLIGV---SGGTAVDAEEMLKGELLEVLSTMAQLRNEIRYAAQQQEAVQRRMERLSDEE 421

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
               +Q+R +     EL + +    + +      Y +   E A  L +IS D     R +
Sbjct: 422 AKWTEQQRKLNARRAELEKQLEATLDAISKARTKYID-QAEKAKELGQISEDATAALRKW 480

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             ++        T +   +   + G +   +
Sbjct: 481 EQKLDAQVSRRDTMK--EMQDALDGFMHGVR 509


>gi|160875777|ref|YP_001555093.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS195]
 gi|160861299|gb|ABX49833.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS195]
 gi|315267966|gb|ADT94819.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS678]
          Length = 360

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 83/269 (30%), Gaps = 30/269 (11%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           Y +   +        +  ++ +    M  I      +    +     ++    D+ +   
Sbjct: 18  YQAMQPQEIATAQMKLMPNVVIATAAMEPIRDEVEAIGTNKAAESVTITPKVTDMVIALK 77

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             + + V + DL  Q        L+  E I + K     +++   E N   +        
Sbjct: 78  FDDGDIVKKGDLLVQ--------LQNAEQIAKVKAAQVKVSDNQREFNRISSLVTSRTVA 129

Query: 265 DLEQNQRT--FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           +LE+++         ++L   + +   ++IL+P  G  +  +  S  +       +  + 
Sbjct: 130 ELERDRLQTLIDTTRAELEQAQASLNDRSILAPFNGR-LGLRQISVGSLVSPGTAITTL- 187

Query: 323 PHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
                    +   V  + IQ +  G     +   + D     FK ++  ID  ++     
Sbjct: 188 --DDISKIKLDFSVPERFIQDLAPGKKVEAKAVAFPDFT---FKGVVTSIDSRVNPTTRT 242

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +           I      +  + L  G 
Sbjct: 243 V-----------IVRAEIPNPELRLLPGM 260


>gi|90418402|ref|ZP_01226314.1| putative efflux transporter, RND family, membrane fusion protein
           subunit [Aurantimonas manganoxydans SI85-9A1]
 gi|90338074|gb|EAS51725.1| putative efflux transporter, RND family, membrane fusion protein
           subunit [Aurantimonas manganoxydans SI85-9A1]
          Length = 517

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 71/218 (32%), Gaps = 24/218 (11%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            E+  V++ D  ++  ++ +  L+ R     Q        +   +     A+     + +
Sbjct: 103 VEEVLVAKGDFLEEGTLIARIALDDRSAQVAQAEAELSRRQGEYDRVSGLADRGYSTAAE 162

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL---MKIV 322
           +E  Q   A   + L  + +T     I +PI G ++         +   S  +   + I 
Sbjct: 163 VEAAQAELASAKAALAAIRQTTGDTEIRAPITG-VLDAFDLDLGEFVAASAEIGQQIDI- 220

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  +  ++  + +  VK G  A V F     I  +  +  +  I            
Sbjct: 221 ---DPLTVDVQIAQQNVGKVKVGQPAAVTF-----ITGEAREGTVRYIAANADTATRT-- 270

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               + V + +      + + ++  G  A+V      T
Sbjct: 271 ----FPVEVVV-----ENPDRDIPAGISAQVRIPTGET 299



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/82 (12%), Positives = 32/82 (39%), Gaps = 8/82 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V++ G++  +  +  +++   G +++  V  G  + +GT +           +D +   +
Sbjct: 81  VAAEGQVSPD-RITPVRAKVGGTVEEVLVAKGDFLEEGTLIARI-------ALDDRSAQV 132

Query: 104 KNLRCHIDTEKSALDFLNNKYD 125
                 +   +   D ++   D
Sbjct: 133 AQAEAELSRRQGEYDRVSGLAD 154


>gi|326319007|ref|YP_004236679.1| secretion protein HlyD family protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375843|gb|ADX48112.1| secretion protein HlyD family protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 323

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/142 (10%), Positives = 41/142 (28%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
               + G I  +  ++++     G++    V  G  + +G  LL           ++ + 
Sbjct: 57  GVAIARGRIEVQGGMLDLTPLQEGVVDTVAVHEGQAVKRGQVLLRLSGTGLQAEAEVAQA 116

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            ++            +  L      L +A  +   +         +  +   +  ++   
Sbjct: 117 ELQLAEARERARAQQVPALRRTAARLAEAAAANAAEPQRAEDAAQALRAAESDAAVARAE 176

Query: 162 RSLKMKLTRMRSIYLNRLDLEN 183
             +  K          RL+L  
Sbjct: 177 AEVARKKLAQVRGQQARLELRA 198



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 59/177 (33%), Gaps = 12/177 (6%)

Query: 205 LFEKNAVSQNDLN---QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           L  +  V+Q +L     +ER   +    LR                   A  + A  L+ 
Sbjct: 107 LQAEAEVAQAELQLAEARERARAQQVPALRRTAARLAEAAAANAAEPQRAE-DAAQALRA 165

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY----AQQSQP 317
              D    +        KL  +   + +  + +P  GT+V     + +      A  S  
Sbjct: 166 AESDAAVARAEAEVARKKLAQVRGQQARLELRAPEDGTVV--HVRTQAGVRLAAAAGSHA 223

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + ++P  +   +RA+V       VK G  A+V              A + +I P++
Sbjct: 224 AITLLP-HRPLIVRAEVNQNYAAAVKPGMRASVTTDG-DAAPVALPAARVVRISPVL 278


>gi|94495079|ref|ZP_01301660.1| putative multidrug resistance efflux pump [Sphingomonas sp. SKA58]
 gi|94425345|gb|EAT10365.1| putative multidrug resistance efflux pump [Sphingomonas sp. SKA58]
          Length = 394

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 53/419 (12%), Positives = 108/419 (25%), Gaps = 79/419 (18%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILL--PIEISVSSSGEILNEDNVVEIKSPF 63
            +  K   P  L  + +  +  I  L+  +     P   +V  +        +  +    
Sbjct: 38  TEPPKTVKPRRLTVLIMAGVALIGVLLILAAWRIWPFTTTVVVTENSYVRGQITVMSPQV 97

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           +G + +  V +   + +G PLL  +D        + +  ++     +D  ++ L      
Sbjct: 98  NGYVAEVLVRDFQHVKEGQPLLRIDD-------RIYRQQLEQAEGQLDAAEANLANAAQT 150

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                   E+R   L     +     ++     ++ +     + L     I         
Sbjct: 151 IAQNLVDVEARRADLYAAEAERD--RARADEERVNDLATRGSVSLRERDQIRATARSGAA 208

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                RA +   Q+ +   +                   V +  LE +      +  L  
Sbjct: 209 NVLKARAAIRIAQETVKATR-------------------VSRLGLEAQVKTARAQRDLAR 249

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           IN          A  L E S    Q                                   
Sbjct: 250 INLANTIIYAPMAGQLSEASVRQGQ----------------------------------- 274

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD-----I 358
                  Y      L+ +VP  +  +I A     Q + ++ G  AT +     +      
Sbjct: 275 -------YVSAGSQLLFLVP--ESLWIIANYKETQTRTIRPGQVATFKVDALGNEPLAGH 325

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            E    A   +   +     +   T+    + ++IT          LR G         
Sbjct: 326 VEGFAPATGSEFSVLRPDNASGNFTKVVQRIPIRITIDPGQPLAKRLRPGMSVVTRVET 384


>gi|46447523|ref|YP_008888.1| hypothetical protein pc1889 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46401164|emb|CAF24613.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 282

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 99/267 (37%), Gaps = 28/267 (10%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL----TMMKNLFEKNAVSQND 215
             +  +  +T   ++ + ++DL  +       +S  + D      ++  L ++  V    
Sbjct: 27  EKKESEDSITLYGNVDVRQVDLGFRVKGRVDQMSYQEGDFVSVGQLIATLDKQPYVDLVL 86

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
             + +    +++L+  E + E++  L     +  E   +  +    +  +L++ Q     
Sbjct: 87  QAKAQVESIEASLKNAEQLIERRRTLIGTGAISSEEYEDTLSSRDVLLANLKEAQ----- 141

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             + L +     +   I +P  GTI+  +     +  +++ P+  I+      ++R+ V 
Sbjct: 142 --AALGVALTNLQDTEIYAPNDGTILT-RIREPGSIVREADPV-YILSLISPIWVRSFVA 197

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKF-KAIIEKIDPII-----SQQDNNLQTQEYYEV 389
             ++  +  G    +    + D +E K  +  I  I P+      S +   L+T   Y +
Sbjct: 198 EPELGEIYPGMMVEI----FTDTKEGKVYQGHIGFISPVAEFTPKSVETTKLRTDLVYRL 253

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFT 416
            +   +         LR G P  +   
Sbjct: 254 RIIAENPDKG-----LRQGMPVTLRLK 275



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 37/105 (35%), Gaps = 7/105 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           G + +   + G  +  G  + T +        ++    ++  + S+KN    I+  ++ +
Sbjct: 54  GRVDQMSYQEGDFVSVGQLIATLDKQPYVDLVLQAKAQVESIEASLKNAEQLIERRRTLI 113

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
                  +  E    SR+  L +      +    + N   + +Y 
Sbjct: 114 GTGAISSEEYEDTLSSRDVLLANLKEAQAALGVALTNLQDTEIYA 158


>gi|30249193|ref|NP_841263.1| hypothetical protein NE1208 [Nitrosomonas europaea ATCC 19718]
 gi|30180512|emb|CAD85119.1| HlyD family secretion protein [Nitrosomonas europaea ATCC 19718]
          Length = 344

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 86/256 (33%), Gaps = 20/256 (7%)

Query: 169 TRMRSIYLNRLDLENKSSLLR-ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           T   S+ + + +L      LR   +   Q+ L   + +  +       L++       S 
Sbjct: 93  TAEASVRVAQAELAKMRRGLRPQEIIQAQEALNQAQAVARRAERDYVRLSRLLPSKASSQ 152

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            ++      +   +  +       +     + KE   D+   +   A  M+         
Sbjct: 153 QDVDNARAARDQAIAGVKAAKAALSQAREGFRKE---DIAAAEAQLAAAMATRDQAATAL 209

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               + +P  GT++  +     +    SQ  +  +   K  Y+RA +    +  +  G  
Sbjct: 210 ADTELFAPSDGTVIT-RIREPGSMV-VSQSAVYNLSLDKPVYVRAYIGETALGRIAPGTP 267

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNN 402
             VR    +D  +K +   I  I P       + +  +L+T   Y + + ++D   +   
Sbjct: 268 VQVR----SDSSKKIYHGQIGFISPRAEFTPKTVETTDLRTDLVYRLRIVVSDADAA--- 320

Query: 403 IELRNGFPAEVLFTAK 418
             LR G P  +    +
Sbjct: 321 --LRQGMPITIEVDTR 334



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/127 (8%), Positives = 36/127 (28%), Gaps = 4/127 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +   + G  ++ GT + T +     +     + S++  +  +   +  L       
Sbjct: 60  GRVAQMMFDEGDAVVAGTRMATLDAQPYQEAFATAEASVRVAQAELAKMRRGL----RPQ 115

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++++      + Q +    +             +S  + +                 +  
Sbjct: 116 EIIQAQEALNQAQAVARRAERDYVRLSRLLPSKASSQQDVDNARAARDQAIAGVKAAKAA 175

Query: 185 SSLLRAL 191
            S  R  
Sbjct: 176 LSQAREG 182


>gi|301512617|ref|ZP_07237854.1| putative RND family drug transporter [Acinetobacter baumannii
           AB058]
          Length = 369

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +  + +++++G+I    W    P    +   G +  E   V + +     I++  V+ G 
Sbjct: 53  IIAVVVIALLGLIIFGLWKSYQP--KPIELQGRVEAET--VHVSTKVPSRIEEIYVQEGQ 108

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           +I +G PL+     E          ++++      T        N   D L   ++S + 
Sbjct: 109 KISKGQPLVRLVSPEIEAKKQQALATLQSALAFQSTVDRGSQQEN--IDTLYANWQSMKA 166

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q  +     +     ++  G+ S  R  +M   +  +  L+    + + +  +   +S Q
Sbjct: 167 Q-ANLAKTTYQRGENLYRQGVISRQRRDEMLAAQTSAQELSEAAYQ-QYARAKRGSTSQQ 224

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIV 223
           K     +    K AVS+    + E  +
Sbjct: 225 KSTADAQVEIAKAAVSEAQALEAETRL 251


>gi|322434158|ref|YP_004216370.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX9]
 gi|321161885|gb|ADW67590.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX9]
          Length = 460

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 72/235 (30%), Gaps = 36/235 (15%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +A L    + +   + LF + A+   DL+                    K      
Sbjct: 143 LAQAKATLDLDNQIVKSREQLFAQGAIPGRDLD------------------TAKATAVQA 184

Query: 245 NELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              YD A  ++    +  S   L     T      K    E       I +PI+G +   
Sbjct: 185 QATYDLAQQQYEAVKRSGSTASLVSANGTLESAKGKYMGAEAQLSYTNIRTPISGMVTER 244

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
             F     A    P++ ++  + +   +  V   Q QH+K G  A +  P   +      
Sbjct: 245 PLF-PGETAAAGAPIVTVM-DTSVMLAKVHVAQVQAQHLKIGADAELSVPGMDE----PI 298

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            A +  + P +      +      EV LK       + +  L+ G    V    +
Sbjct: 299 NAKVSLVSPALDAGSTTV------EVWLKTP-----NKDGRLKAGMTLHVTIKGR 342



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 28/173 (16%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +IL P+  +              +I +P    +KKF V+ GS +  G  + T E+    D
Sbjct: 63  AILAPVAQAAILP----------KITAP----VKKFYVQRGSHVSAGQLVATLEN---RD 105

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           L      +            +A +    +     +   ++ +  LD   +   +  ++F 
Sbjct: 106 LAAAAADNAGAYSAAKGAYTTATETTVPEDATKARLDLAQAKATLDLDNQIVKSREQLFA 165

Query: 155 YG-----------ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            G            ++V       L + +   + R             L S +
Sbjct: 166 QGAIPGRDLDTAKATAVQAQATYDLAQQQYEAVKRSGSTASLVSANGTLESAK 218


>gi|149728671|ref|XP_001498255.1| PREDICTED: laminin, beta 2 (laminin S) [Equus caballus]
          Length = 1801

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 72/254 (28%), Gaps = 22/254 (8%)

Query: 51   LNEDNVVEIKSPFSGI---------IKKFQVEN-GSQILQGTPLLTFEDIETTDLIDLKK 100
            +       I+     I         +        G        L   +        + +K
Sbjct: 1548 IPASPEQ-IQHLAGAIAERVRSLADVDTILARTVGDVRRAEQLLQ--DARRARSRAEGEK 1604

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
               + ++  ++  + A               +  E+ L     +       + + G  + 
Sbjct: 1605 QKAETVQAALEEAQRAQGAAQGAIQGAVVDTQDTEQTLHQVQERMAGAEQALSSAGERA- 1663

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             + L   L  ++   L R      +S       S Q      + L +       D  Q  
Sbjct: 1664 -QQLDGLLEALK---LKRAGNSLAASSAEETAGSAQGRAREAEQLLQG---PLGDQYQTV 1716

Query: 221  RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            R + +   +       +   LR       +A  +    L+E+    E+N+R    + ++L
Sbjct: 1717 RALAERKAQGVLAAQARAEQLRDEARGLLQAAQDKLQRLQELEGTYEENERALEGKAAQL 1776

Query: 281  TILEKTREQKTILS 294
              LE  R +  + +
Sbjct: 1777 DGLE-ARMRSVLQA 1789



 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 67/212 (31%), Gaps = 8/212 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN-KYDVLEKAFESREEQLLDFLGKYHSTC 149
            +        +  I++++  +  E +  D +      VLE +  +  EQ+    G      
Sbjct: 1507 QVEQANQELRELIQSVKDFLSQEGADPDSIEMVATRVLELSIPASPEQIQHLAGAIAERV 1566

Query: 150  SKVFN-----YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              + +            R  +  L   R         + K+  ++A L   Q+     + 
Sbjct: 1567 RSLADVDTILARTVGDVRRAEQLLQDARRARSRAEGEKQKAETVQAALEEAQRAQGAAQG 1626

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEI 262
              +   V   D  Q    V +      + +       + ++ L +   L+ A  +     
Sbjct: 1627 AIQGAVVDTQDTEQTLHQVQERMAGAEQALSSAGERAQQLDGLLEALKLKRAGNSLAASS 1686

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + +   + +  A E  +L       + +T+ +
Sbjct: 1687 AEETAGSAQGRAREAEQLLQGPLGDQYQTVRA 1718


>gi|254238665|ref|ZP_04931988.1| hypothetical protein PACG_04827 [Pseudomonas aeruginosa C3719]
 gi|126170596|gb|EAZ56107.1| hypothetical protein PACG_04827 [Pseudomonas aeruginosa C3719]
          Length = 425

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 52/390 (13%), Positives = 113/390 (28%), Gaps = 90/390 (23%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P+   +   G +     VV + +PF+G ++   VE G ++ +G  LL  +  E    + 
Sbjct: 50  APLVHQIGLVGRLEP-GRVVTLAAPFAGNVEALLVEPGQRVAEGQELLRMDTREIAVQVR 108

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   R  +   +                                           
Sbjct: 109 EAQSALLKARRTLQDLRDW----------------------------------------- 127

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                 +      +RS  L +   E K    R L          + +L ++ +  + DL 
Sbjct: 128 -ERGEDMARVRRALRSAQLAQSSTERKLRETRELFQRGIVPRNELDDLEQQASQQRMDLE 186

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
              R V  +  + +    +   M                        DL      +    
Sbjct: 187 AARREVESTRAKGQGENRQIAEM------------------------DLANASVKYETLQ 222

Query: 278 SKLTILEKTREQKTILSPIAGTIVYN----------QSFSSSNYAQQSQPLMKIVPHSKL 327
           ++L         +T+ +P AG +V            +   + +   Q Q L  +    + 
Sbjct: 223 AQLDG-------RTVRAPFAGIVVAAPGLAGEQGSREPVQAGSKLGQGQALFGLA-SVER 274

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + AKV+   I  +++G    +    +          +I  +            + ++ 
Sbjct: 275 LKVSAKVSELDINQLREGQAVEISGDGFEGTT---LAGVIAALGGQALPGMAQGGSPQF- 330

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           EV + +  L       ++R G  A++  T 
Sbjct: 331 EVTVSVAPLDPRQLQ-KIRLGMSAKLTVTT 359


>gi|294787754|ref|ZP_06752998.1| macrolide-specific efflux protein MacA [Simonsiella muelleri ATCC
           29453]
 gi|294484047|gb|EFG31730.1| macrolide-specific efflux protein MacA [Simonsiella muelleri ATCC
           29453]
          Length = 395

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 66/144 (45%), Gaps = 11/144 (7%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  +VS++GEI +  N+V++ +  SG IK+  V+ G ++  G  +   +++   + ++
Sbjct: 45  GKISQTVSATGEI-SATNLVDVGAQVSGQIKRMHVKIGDEVKTGDLIAEIDNVTQVNEVN 103

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYD----------VLEKAFESREEQLLDFLGKYHS 147
            KK  ++  +  + + + A+     KYD          V ++ FE+ E+ L+    K   
Sbjct: 104 TKKAQLETYQAQLASAEVAVKIAQRKYDRYKGLLQQGAVSQEEFETIEDTLVTNRAKIKE 163

Query: 148 TCSKVFNYGISSVYRSLKMKLTRM 171
             S +    I+       +  TR+
Sbjct: 164 LQSSIRQTQIAINTAEKDLGYTRI 187



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 80/288 (27%), Gaps = 57/288 (19%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q+   + + H         G          ++  + +        + + +     +   
Sbjct: 67  AQVSGQIKRMHVKIGDEVKTGDLIAEIDNVTQVNEVNTKKAQLETYQAQLASAEVAVKIA 126

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+     K L ++ AVSQ +    E  +  +  ++                         
Sbjct: 127 QRKYDRYKGLLQQGAVSQEEFETIEDTLVTNRAKI------------------------- 161

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
               KE+   + Q Q             EK      I +P  GT+V             S
Sbjct: 162 ----KELQSSIRQTQIAI-------NTAEKDLGYTRITAPSDGTVVAL-VVEQGQTINAS 209

Query: 316 Q---PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           Q    +++I  +      + ++       VK G    + F   ++       A ++ IDP
Sbjct: 210 QTSPTVVQIA-NLTSMTNKMQIAEGDATKVKAGQ--NLSFTILSEPDAP-ISATLDSIDP 265

Query: 373 II--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
            +        S+  +      YY     + +        +L  G   +
Sbjct: 266 GLTTMSQGSYSKSTDTTSNAIYYYARAIVPNPER-----KLSIGMTTQ 308


>gi|238892892|ref|YP_002917626.1| putative secretion protein [Klebsiella pneumoniae NTUH-K2044]
 gi|238545208|dbj|BAH61559.1| putative secretion protein [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 354

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 79/217 (36%), Gaps = 24/217 (11%)

Query: 17  LKRMTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
             R   +SI   +G+  W I+     P+    +    +    + V      SG +    V
Sbjct: 7   FARWVRVSIAAFLGIFAWFIVADIWIPLTPDSTVMRVVTPVSSRV------SGYVSHVYV 60

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            N SQ+ +G  L   +     + ++  +++++     +  ++        + ++    + 
Sbjct: 61  HNNSQVKKGDLLYELDPTPFINKVEAAQIALEQ--AKLSNQQLDAQIAAARANLRTAQYT 118

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSV-------YRSLKMKLTRMRSIYLNRLDLENKS 185
           +R +++     +  ST   V    +  V        +S+     +++++ + R + ++K 
Sbjct: 119 ARNDKVTLDRYQRLSTMQNVSQSDLDKVRTTWQTSEQSVSALNAQIQNLLIQRGERDDKR 178

Query: 186 ----SLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLN 217
                  R  L   Q +L   K   E    VS   LN
Sbjct: 179 NVTLQKYRNALEEAQLNLAWTKVRAETDGMVSNLQLN 215



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 45/154 (29%), Gaps = 18/154 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   + +   +L+      + +              +    + +  L   + L     VS
Sbjct: 80  FINKVEAAQIALEQAKLSNQQLDAQIAAARANLRTAQYTARNDKVTLDRYQRLSTMQNVS 139

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q+DL++       S   +     + +N+L    E  D+ N+    Y       LE+ Q  
Sbjct: 140 QSDLDKVRTTWQTSEQSVSALNAQIQNLLIQRGERDDKRNVTLQKYRN----ALEEAQLN 195

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            A                 + +   G +   Q  
Sbjct: 196 LA--------------WTKVRAETDGMVSNLQLN 215


>gi|218676992|ref|YP_002395811.1| hypothetical protein VS_II1249 [Vibrio splendidus LGP32]
 gi|218325260|emb|CAV27243.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 357

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 98/270 (36%), Gaps = 25/270 (9%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE--NKSSLLRALLSSHQKDLTMMKN 204
            T  ++ N  + +    L  +L  +     + + L         R+ L++ Q+  T  + 
Sbjct: 108 ETAIQLTNMEVEAQIEFLHAELLDLEIRSPDDIGLLHLKGIEETRSNLNTVQQIQTRYEE 167

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             +K  VS  D      +      +L               +  D  N + A   +E++ 
Sbjct: 168 YRKKGQVSDVDYASIVGMSNSLNNQLNG-------------QKLDYQNAKLAEQERELAG 214

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            + Q +R    +++   ++E+      I SP  G +V            +   L+ I  +
Sbjct: 215 PVSQARRALMKDLALKRVVEQGLA---IKSPYEGRVVDIHVV-EGQRVFEGDELVTIAKN 270

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +    + A + PK +++   G    VRFP+     E +    +E +  + +Q  +  + Q
Sbjct: 271 TIPQVV-AYLDPKYLENAIIGAHTKVRFPN-GSTFEAEIADSVEIVSKLPTQLASPFEGQ 328

Query: 385 E-YYEVILKITDLAFSDNNIELRNGFPAEV 413
             Y +V L  T     +  IE   G   EV
Sbjct: 329 PAYLKVALNFTADLPREYWIE---GMTVEV 355



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 74/212 (34%), Gaps = 7/212 (3%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
              +   KR        + L  ++  +  + +   L     V +   I    + V + S 
Sbjct: 32  KVAYGQAKRGGYRFRWYLILSLVVSPLLFVAY-FFLKTNFLVIAPAIIT--SHPVTLTSK 88

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            +G++    V++GSQIL+    +   ++E    I+     + +L      +   L  L  
Sbjct: 89  VAGVVGPIPVDDGSQILKSETAIQLTNMEVEAQIEFLHAELLDLEIR-SPDDIGLLHLKG 147

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             +        ++ Q      +     S V    I  +  SL  +L   +  Y N   L 
Sbjct: 148 IEETRSNLNTVQQIQTRYEEYRKKGQVSDVDYASIVGMSNSLNNQLNGQKLDYQN-AKLA 206

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
            +   L   +S  ++ L  MK+L  K  V Q 
Sbjct: 207 EQERELAGPVSQARRAL--MKDLALKRVVEQG 236


>gi|154493331|ref|ZP_02032651.1| hypothetical protein PARMER_02668 [Parabacteroides merdae ATCC
           43184]
 gi|154086541|gb|EDN85586.1| hypothetical protein PARMER_02668 [Parabacteroides merdae ATCC
           43184]
          Length = 352

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 75/211 (35%), Gaps = 25/211 (11%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             + + +  + E  +     EL   I EQ+ + +    LY++  +  +        ++  
Sbjct: 93  QLIVRLEDREYENGIAIDAKELSLEIAEQEQVKQK--ALYEKGGVTLS--------EMRN 142

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +    +        +   E+  + +P  G IV    ++S    +Q +P++ I+      
Sbjct: 143 TEVKVTNARYDYENGKLNLEKMNVKAPFDGVIVDLPHYTSDVRIEQGKPIVGIM-DYARM 201

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           Y+   +    I +VK      +   HY   ++   + +I ++ P IS +    +      
Sbjct: 202 YMDINLPESAIGYVKADQPVYI--THYTLPKD-TIRGVISELSPAISSETRTFKG----- 253

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                  +   ++ ++LR G   +       
Sbjct: 254 ------KILIQNDGLKLRPGMFVKADIVVNK 278


>gi|89891753|ref|ZP_01203256.1| RND family efflux transporter [Flavobacteria bacterium BBFL7]
 gi|89516088|gb|EAS18752.1| RND family efflux transporter [Flavobacteria bacterium BBFL7]
          Length = 358

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 73/219 (33%), Gaps = 32/219 (14%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL------KEISRDLEQN 269
           + + + +V  +  +L+    +    +      ++ A  ++  +           ++L+  
Sbjct: 83  VKKGQLLVAINNADLQAKKGQVNASITEATAAFNNAQKDYNRFKNLFADNSASQKELDDI 142

Query: 270 QRTFADEMSKLTILEK-------TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI- 321
              F    ++L   ++             I +P  G I   +S    + A   QPL+ I 
Sbjct: 143 TANFNMAKARLEGAQQMKNEINAQFAYSNITAPFNGVITS-KSIKKGDMANPGQPLLSIE 201

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
            P      + A V   +I  +KK     V         ++     ++++    +QQ    
Sbjct: 202 APGD--FEVMAMVPETEISQIKKETEVQVTIS----SIQQTLTGKVKEVST-SAQQTGGQ 254

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                Y V + I        ++ + +G  A + F  +  
Sbjct: 255 -----YLVKITID-----KTDVPVLSGMFATIAFPVERK 283



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 34/105 (32%), Gaps = 6/105 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V  G  + +G  L+   +      +  KK  +           +      N++
Sbjct: 70  GFVNNVLVNVGDPVKKGQLLVAINN----ADLQAKKGQVNASITEATAAFNNAQKDYNRF 125

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             L     + +++L D    ++   +++   G   +   +  +  
Sbjct: 126 KNLFADNSASQKELDDITANFNMAKARL--EGAQQMKNEINAQFA 168


>gi|26250898|ref|NP_756938.1| multidrug resistance protein MdtN [Escherichia coli CFT073]
 gi|227886880|ref|ZP_04004685.1| multidrug resistance protein MdtN [Escherichia coli 83972]
 gi|300988461|ref|ZP_07178699.1| efflux pump membrane protein [Escherichia coli MS 45-1]
 gi|301047701|ref|ZP_07194763.1| efflux pump membrane protein [Escherichia coli MS 185-1]
 gi|331650110|ref|ZP_08351183.1| multidrug resistance protein MdtN [Escherichia coli M605]
 gi|331681016|ref|ZP_08381653.1| multidrug resistance protein MdtN [Escherichia coli H299]
 gi|73621206|sp|Q8FAX1|MDTN_ECOL6 RecName: Full=Multidrug resistance protein mdtN
 gi|26111330|gb|AAN83512.1|AE016771_23 Hypothetical protein yjcR [Escherichia coli CFT073]
 gi|227836222|gb|EEJ46688.1| multidrug resistance protein MdtN [Escherichia coli 83972]
 gi|281181172|dbj|BAI57502.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|300300447|gb|EFJ56832.1| efflux pump membrane protein [Escherichia coli MS 185-1]
 gi|300407459|gb|EFJ90997.1| efflux pump membrane protein [Escherichia coli MS 45-1]
 gi|307556252|gb|ADN49027.1| multidrug resistance protein MdtN [Escherichia coli ABU 83972]
 gi|315294004|gb|EFU53356.1| efflux pump membrane protein [Escherichia coli MS 153-1]
 gi|331041055|gb|EGI13212.1| multidrug resistance protein MdtN [Escherichia coli M605]
 gi|331081237|gb|EGI52398.1| multidrug resistance protein MdtN [Escherichia coli H299]
          Length = 343

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 87/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L  +  VS  ++++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|86140727|ref|ZP_01059286.1| putative transport/efflux component protein [Leeuwenhoekiella
           blandensis MED217]
 gi|85832669|gb|EAQ51118.1| putative transport/efflux component protein [Leeuwenhoekiella
           blandensis MED217]
          Length = 383

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 1/124 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
             ++G I+  + V  IK   SGIIK+  VE G+ +  G  L   E +     +   + +I
Sbjct: 49  TVATGSIVPREEV-LIKPNISGIIKEILVEAGAFVEAGDLLAQIEVVPNASSLVSARNNI 107

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  R +++T K  L+   + Y   +  F+       DF          V N+    V  S
Sbjct: 108 QTARTNLETAKLTLENQESIYQRQKALFDKGVVSANDFDNSQREYNQAVQNFKQQQVSLS 167

Query: 164 LKMK 167
              +
Sbjct: 168 SAQQ 171



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 76/260 (29%), Gaps = 50/260 (19%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
              ++   +I   R +LE     L    S +Q+     K LF+K  VS ND +  +R   
Sbjct: 98  SSLVSARNNIQTARTNLETAKLTLENQESIYQRQ----KALFDKGVVSANDFDNSQREYN 153

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           ++                                 K+    L   Q+ +    +  T   
Sbjct: 154 QAV-----------------------------QNFKQQQVSLSSAQQNYDIVKTGTTTGL 184

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQ-----SQPLMKIVPHSKLTYIRAKVTPKQI 339
                 ++ + I G ++       +   +         +  +   +       KV   ++
Sbjct: 185 GNNATTSVRATITGMVLEVPVKEGNQVIESNNFNDGTTIASLANVND-MIFEGKVDESEV 243

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +K+     +       I  KKF A ++ I P    ++          +  +I      
Sbjct: 244 GKIKEDLPLEITVGA---IENKKFDATLDYIAPKGVAENGA--------IQFEIKGTLAK 292

Query: 400 DNNIELRNGFPAEVLFTAKN 419
            ++  +R G  A      + 
Sbjct: 293 KDSTFIRAGLSANASIILER 312


>gi|238794748|ref|ZP_04638351.1| HlyD family secretion protein [Yersinia intermedia ATCC 29909]
 gi|238725902|gb|EEQ17453.1| HlyD family secretion protein [Yersinia intermedia ATCC 29909]
          Length = 352

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 92/288 (31%), Gaps = 26/288 (9%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                L   +    S++       +V E +   R + L       +          +   
Sbjct: 45  SEDAELGASVVHVASSVPGRIISINVAENSKVRRGDLLFTIEPDLYRLQVAQAQAELKMA 104

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +   +   + +   N      +    +A L    + L  ++ L  K  V+   ++   
Sbjct: 105 EAARDTQQRTVVAEQSNAAITNEQIVRAQANLKLATQTLARLQPLLPKGYVTAQQVDDAA 164

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
              + + + L++ + +       ++                       ++       + L
Sbjct: 165 TAKHDAEVSLKQALKQSYAAEALVSTT-------------------AASEALVVARRAAL 205

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            I E+      I +P  G +V     S+  +    Q +  ++ +++  +  A     +++
Sbjct: 206 AIAERELANTQIRAPHDGRVVGLTV-SAGEFVVPDQAIFTLI-NTEHWHASAFFRETELK 263

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD--NNLQTQEY 386
           H+K G  ATV        R++  +  +E I   +S +D  N  +   Y
Sbjct: 264 HIKVGDCATVYVMA---DRQRAIQGRVEGIGWGVSSEDMLNIPRGLPY 308


>gi|261756349|ref|ZP_06000058.1| multidrug resistance protein A [Brucella sp. F5/99]
 gi|261736333|gb|EEY24329.1| multidrug resistance protein A [Brucella sp. F5/99]
          Length = 214

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 55/175 (31%), Gaps = 15/175 (8%)

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           AN   +      +  R F        I  +     ++ +P  G I  N S    +     
Sbjct: 41  ANLYAKPQDIRAEILRRFQFSRIVCVIAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPG 99

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
           Q +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P   
Sbjct: 100 QKIAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASG 155

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
                   +      T+    V ++IT    +  + ++R G    V       T 
Sbjct: 156 AVFSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDT--RTA 208


>gi|254784964|ref|YP_003072392.1| efflux transporter RND family, MFP subunit [Teredinibacter turnerae
           T7901]
 gi|237684213|gb|ACR11477.1| efflux transporter, RND family, MFP subunit [Teredinibacter
           turnerae T7901]
          Length = 353

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 58/171 (33%), Gaps = 10/171 (5%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK------EISR 264
           ++    N  +R+     L +     E+   L+      DEA  ++  +          + 
Sbjct: 65  ITAIHFNDNQRVQAGDVL-VEMTSAEEHAQLKQAMATLDEAERQYGRFKALEKDKVATAA 123

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L+Q +       ++L  ++   + + +++P  G +V  ++ S     +    +  +   
Sbjct: 124 QLDQQKVLVDAAEAQLRAVQSRLQDRLLIAPFDG-VVGLRNISVGALVRPGDVITTL-DD 181

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFKAIIEKIDPII 374
             +  +   V    +  ++ G     R           K   I  ++DP+ 
Sbjct: 182 DSVMKLDMTVPSIYLADLRVGMPVVARATALRDQAFNGKLVGIDSRVDPVT 232


>gi|218692379|ref|YP_002400591.1| multidrug resistance protein MdtN [Escherichia coli ED1a]
 gi|218429943|emb|CAR10775.1| membrane fusion protein of efflux pump [Escherichia coli ED1a]
          Length = 343

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 87/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L  +  VS  ++++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 8/148 (5%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I +  V +   + QG  L   +       +   + S+  L   I   + ++D     
Sbjct: 56  SGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFG 115

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D +    E               T   +    +S+          R     LN + L+ 
Sbjct: 116 ADSVNATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRAAEADLNAVLLQA 175

Query: 184 KSS--------LLRALLSSHQKDLTMMK 203
           +S+         L A  ++ + D+ + K
Sbjct: 176 QSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|168240682|ref|ZP_02665614.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205340337|gb|EDZ27101.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
          Length = 331

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  + + Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRAQAQATLKSAQDKLSQYRTGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   +   +  T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 185 ASLEQAKAQLAQAQLDLQDTTLIAPANGTLLT-RAVEPGSMLNAGSTVLTLS-LTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLSQTQPGRDILL---YTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIIVTDADDA-----LRQGMPVTV 322



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 40/339 (11%), Positives = 97/339 (28%), Gaps = 53/339 (15%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
            TW      +  ++  G +  +   V I     G +    V+ G  I  G  L   +   
Sbjct: 21  GTWWYQSRQDDGLTLYGNV--DIRTVNISFRVGGRLASLNVDEGDAIKAGQVLGELDHAP 78

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             + +   K  +   +   D   +             +  E  +        +     ++
Sbjct: 79  YENALMQAKAGVSVAQAQYDLMLAGY-----------RDEEIAQAAAAVRQAQAAYDYAQ 127

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            F      +++S  +    + +   +R   +       A L S Q  L+  +    +  +
Sbjct: 128 NFYNRQQGLWKSRTISANDLENARSSRAQAQ-------ATLKSAQDKLSQYRTGNREQDI 180

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q           K++LE  +    Q  +      L   AN        E    L     
Sbjct: 181 AQ----------AKASLEQAKAQLAQAQLDLQDTTLIAPANGTLLTRAVEPGSMLNAGST 230

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP----LMKIVPHSK- 326
                +++   +    +++ +     G       ++     +  +P    +  + P ++ 
Sbjct: 231 VLTLSLTRPVWVRAYVDERNLSQTQPGR--DILLYTDG---RPDKPYHGKIGFVSPTAEF 285

Query: 327 ------------LTYIRAKVTPKQIQ-HVKKGYTATVRF 352
                           R ++        +++G   TV+F
Sbjct: 286 TPKTVETPDLRTDLVYRLRIIVTDADDALRQGMPVTVKF 324


>gi|197124666|ref|YP_002136617.1| efflux transporter RND family, MFP subunit [Anaeromyxobacter sp. K]
 gi|196174515|gb|ACG75488.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter sp.
           K]
          Length = 458

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 12/196 (6%)

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L + +   + +++  N    E +   +N   E +R     +R  A   + L+      
Sbjct: 153 AQLEQELARVERLVKTGNASAAELDTARSNLGAERARQQAAVER-VAQAEAALSEARHAL 211

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
              T+ SPI G I   +  ++    + S   + ++ I+        + +V   ++ +VK+
Sbjct: 212 SLTTLASPIDGVITK-RQKTAGERVRGSDLSEDVVLIISTLSKMEAKIEVGEHEVVYVKE 270

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G TA V    + D +       + +   + +Q      T  +  V L +     +     
Sbjct: 271 GDTAEVEIDAFPDQKFPATVVEVARNATVKNQGTEGEVTTFF--VRLALDHPVQNA---- 324

Query: 405 LRNGFPAEVLFTAKNT 420
              G  A+        
Sbjct: 325 -LPGMSAQASIATDTR 339



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/178 (12%), Positives = 60/178 (33%), Gaps = 11/178 (6%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +   PI   V+++G++     V  + +  SG + +     G  + +G  L   +    T 
Sbjct: 71  AKRGPITRLVTAAGKLQAATEVK-LSANVSGDLLELDAHEGDLVKKGQVLGKVDSRRYTA 129

Query: 95  LIDLKKVSIKNLR----------CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            +  +  +  +              ++ E + ++ L    +      ++    L     +
Sbjct: 130 QVAQQTAARASAAADVELEKVKVAQLEQELARVERLVKTGNASAAELDTARSNLGAERAR 189

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +   +V     +       + LT + S     +    K++  R   S   +D+ ++
Sbjct: 190 QQAAVERVAQAEAALSEARHALSLTTLASPIDGVITKRQKTAGERVRGSDLSEDVVLI 247


>gi|325955408|ref|YP_004239068.1| efflux transporter RND family, MFP subunit [Weeksella virosa DSM
           16922]
 gi|323438026|gb|ADX68490.1| efflux transporter, RND family, MFP subunit [Weeksella virosa DSM
           16922]
          Length = 344

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 71/208 (34%), Gaps = 23/208 (11%)

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L ++   S   + Q   I+ K  +E+     +       I+    E   +     K+
Sbjct: 72  TRVLVDEG--SYVKVGQTLAIIKKDQIEVDLTQAQNNLQNAIIDNQRYENAYKTGGVTKQ 129

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               L+ ++    +  + +  L        + + I+G IV  +     +      P+  +
Sbjct: 130 ---QLDHSRLQLKNAQAAVKSLGLRISDTNVRATISG-IVNKKYIEPGSVVGPGTPMFDL 185

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V +     ++  V   Q+  +K G T  +    Y D         ++ I P  +   N  
Sbjct: 186 V-NVSRLKLKVMVDESQVAKLKVGQTIPINVSVYPDKSYV---GKVKFIAPKANGALN-- 239

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGF 409
                + V +++      +N+  L+ G 
Sbjct: 240 -----FPVDIEV------NNDGSLKAGM 256


>gi|213613366|ref|ZP_03371192.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 157

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 21/163 (12%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + I   V   G I  +DN   I     G I+   V  G  + +G  L    + +    
Sbjct: 16  YFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNFD---- 71

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                     L+      ++   +L+   + +    +   E  L  L    S  +K    
Sbjct: 72  ----------LQKEYQRYRTQKGYLDKDVNEISFILDKENESGLITLDGTRSLSNKEVKA 121

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            I  V+       +++R+  L +  L+++ S L+  LSS +K+
Sbjct: 122 NIELVH-------SQIRAKELKKTSLDSEISGLQEKLSSKEKE 157


>gi|183600498|ref|ZP_02961991.1| hypothetical protein PROSTU_04077 [Providencia stuartii ATCC 25827]
 gi|188019985|gb|EDU58025.1| hypothetical protein PROSTU_04077 [Providencia stuartii ATCC 25827]
          Length = 369

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 72/209 (34%), Gaps = 20/209 (9%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL-KEISRDLE 267
           N  S   + + + +V  +    + ++   +  LR+   LYD      A +L  E   D  
Sbjct: 84  NFESGQQVKKGQLLVQLNDAVEQADLARYQAQLRNAARLYDRTRTLAAKHLVAEAQVDST 143

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +R  A  + + T       QK I +P  GTI   Q      Y    + +  +V  +K 
Sbjct: 144 RAERDIAQGLIRQTQA--LIAQKAIRAPFDGTIGIRQVH-EGQYLSPGEAIASLV-DTKT 199

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +   +  +    +  G    +    Y     K F A I  IDP++ +           
Sbjct: 200 LKLNFSLDEQAAPELHVGQIVDIHVDAYP---GKTFPARISAIDPLVGKSRTIQL----- 251

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
                       +++ EL+ G  A V   
Sbjct: 252 -------QATLENSDGELKAGMYANVNVV 273



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 5/132 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             GE+     V  + +  SG I K   E+G Q+ +G  L+   D      +   +  ++N
Sbjct: 60  GVGELEAGSQVF-VAAETSGRITKINFESGQQVKKGQLLVQLNDAVEQADLARYQAQLRN 118

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                D  ++    L  K+ V E   +S   +     G    T + +    I + +    
Sbjct: 119 AARLYDRTRT----LAAKHLVAEAQVDSTRAERDIAQGLIRQTQALIAQKAIRAPFDGTI 174

Query: 166 MKLTRMRSIYLN 177
                    YL+
Sbjct: 175 GIRQVHEGQYLS 186


>gi|15804674|ref|NP_290715.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 EDL933]
 gi|15834318|ref|NP_313091.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           Sakai]
 gi|168748065|ref|ZP_02773087.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4113]
 gi|168755260|ref|ZP_02780267.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4401]
 gi|168760939|ref|ZP_02785946.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4501]
 gi|168766349|ref|ZP_02791356.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4486]
 gi|168774448|ref|ZP_02799455.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4196]
 gi|168780502|ref|ZP_02805509.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4076]
 gi|168784706|ref|ZP_02809713.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC869]
 gi|168798250|ref|ZP_02823257.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC508]
 gi|195935869|ref|ZP_03081251.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4024]
 gi|208807730|ref|ZP_03250067.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812400|ref|ZP_03253729.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821333|ref|ZP_03261653.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4042]
 gi|209400246|ref|YP_002273623.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4115]
 gi|217324238|ref|ZP_03440322.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           TW14588]
 gi|254796102|ref|YP_003080939.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           TW14359]
 gi|261225202|ref|ZP_05939483.1| predicted membrane fusion protein of efflux pump [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261255546|ref|ZP_05948079.1| predicted membrane fusion protein of efflux pump [Escherichia coli
           O157:H7 str. FRIK966]
 gi|73621205|sp|Q8X5R2|MDTN_ECO57 RecName: Full=Multidrug resistance protein mdtN
 gi|12519042|gb|AAG59280.1|AE005641_5 putative membrane protein [Escherichia coli O157:H7 str. EDL933]
 gi|13364541|dbj|BAB38487.1| putative membrane protein [Escherichia coli O157:H7 str. Sakai]
 gi|187769896|gb|EDU33740.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4196]
 gi|188017560|gb|EDU55682.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4113]
 gi|189001634|gb|EDU70620.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4076]
 gi|189357433|gb|EDU75852.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364337|gb|EDU82756.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4486]
 gi|189368634|gb|EDU87050.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4501]
 gi|189375051|gb|EDU93467.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC869]
 gi|189379126|gb|EDU97542.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC508]
 gi|208727531|gb|EDZ77132.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733677|gb|EDZ82364.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741456|gb|EDZ89138.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4042]
 gi|209161646|gb|ACI39079.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           EC4115]
 gi|209747390|gb|ACI72002.1| putative membrane protein [Escherichia coli]
 gi|209747392|gb|ACI72003.1| putative membrane protein [Escherichia coli]
 gi|209747394|gb|ACI72004.1| putative membrane protein [Escherichia coli]
 gi|217320459|gb|EEC28883.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           TW14588]
 gi|254595502|gb|ACT74863.1| predicted membrane fusion protein of efflux pump [Escherichia coli
           O157:H7 str. TW14359]
 gi|320190788|gb|EFW65438.1| Inner membrane component of tripartite multidrug resistance system
           [Escherichia coli O157:H7 str. EC1212]
 gi|320638840|gb|EFX08486.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           G5101]
 gi|320665700|gb|EFX32737.1| multidrug resistance protein MdtN [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326341868|gb|EGD65651.1| Inner membrane component of tripartite multidrug resistance system
           [Escherichia coli O157:H7 str. 1125]
 gi|326346558|gb|EGD70292.1| Inner membrane component of tripartite multidrug resistance system
           [Escherichia coli O157:H7 str. 1044]
          Length = 343

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKSEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  VSADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKSEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|117921191|ref|YP_870383.1| secretion protein HlyD family protein [Shewanella sp. ANA-3]
 gi|117613523|gb|ABK48977.1| secretion protein HlyD family protein [Shewanella sp. ANA-3]
          Length = 337

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 78/255 (30%), Gaps = 12/255 (4%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E + + + +P   +I +  V  G Q+  G  LL  +       +  ++  +K  +  +
Sbjct: 51  TVERDRLTLTAPVGELINQINVVEGQQVQAGEVLLELDSTAAKARLGQRQAELKQAQAKL 110

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             E++     +   D    A +     + +    +  T  ++F   + S          R
Sbjct: 111 --EEAVTGARSEDIDKARAALDGANASVKEVQQNFERTQ-RLFKTKVLSQADLDAALAAR 167

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             S+       ++   L     S   +               +    +   +V   +  +
Sbjct: 168 DTSLAKQAEAEQSLRLLQNGTRSEQLEQARAAVEAAMAGVAQEQKALKDLSLVAARSAVV 227

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                   + +   ++L     +E       +        +      S++ IL   R Q 
Sbjct: 228 DTLPWRVGDRVAAGSQLIGLLAIEHPYVRVYLPATWLDRVKA----GSQVKILVDGRAQ- 282

Query: 291 TILSPIAGTIVYNQS 305
               PIAGT+   +S
Sbjct: 283 ----PIAGTVRNIRS 293



 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 93/307 (30%), Gaps = 37/307 (12%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           + +  L N+ +V+E       E LL+                +      L+  +T  RS 
Sbjct: 61  APVGELINQINVVEGQQVQAGEVLLELDSTAAKARLGQRQAELKQAQAKLEEAVTGARSE 120

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            +++           A +   Q++    + LF+   +SQ DL+        S  +  E  
Sbjct: 121 DIDKA--RAALDGANASVKEVQQNFERTQRLFKTKVLSQADLDAALAARDTSLAKQAEAE 178

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              + +                      S  LEQ +      M+ +   +K  +  ++++
Sbjct: 179 QSLRLLQNGTR-----------------SEQLEQARAAVEAAMAGVAQEQKALKDLSLVA 221

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
             +  +         +       L+ ++      Y+R  +    +  VK G    +    
Sbjct: 222 ARSAVVDTLPWR-VGDRVAAGSQLIGLLAIEHP-YVRVYLPATWLDRVKAGSQVKILVDG 279

Query: 355 YADIREKKFKAIIEKI------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
               R +     +  I       P  +  + +     Y      +TD+  +    +L  G
Sbjct: 280 ----RAQPIAGTVRNIRSQPAYTPFYALNERDRARLMY------LTDIDIAPEGEDLPTG 329

Query: 409 FPAEVLF 415
              EV  
Sbjct: 330 MALEVQL 336


>gi|323182192|gb|EFZ67602.1| multidrug resistance protein mdtN [Escherichia coli 1357]
          Length = 323

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 41  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSIN 100

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 101 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 160

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 161 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 201

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 202 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 256

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 257 FEGKVDSIGYGVLPDDGGL 275



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 42/136 (30%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 24  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 83

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 84  LTQRSVDAQQFGADSINATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 143

Query: 172 RSIYLNRLDLENKSSL 187
               LN + L+ +S+ 
Sbjct: 144 AEADLNAVLLQAQSAA 159


>gi|320654923|gb|EFX22884.1| multidrug resistance protein MdtN [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
          Length = 343

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKSEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + V++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  VSADTVDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKSEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|315633769|ref|ZP_07889059.1| S6 family IgA-specific metalloendopeptidase/adhesin [Aggregatibacter
            segnis ATCC 33393]
 gi|315477811|gb|EFU68553.1| S6 family IgA-specific metalloendopeptidase/adhesin [Aggregatibacter
            segnis ATCC 33393]
          Length = 1520

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 71/224 (31%), Gaps = 21/224 (9%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEK----------------SALDFLNNKYDVLEKAFESR 134
            E   L   +    K  +  ++ E+                  L  L  +    EK  ++R
Sbjct: 965  ELARLEAERIAKEKEEQARLEAERIAKEKEDARLAEEARQRELARLEAERIAKEKEEQAR 1024

Query: 135  EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E       K  +  ++       +   + ++   +     L    +  +    R    +
Sbjct: 1025 LEAERIAKEKEEARLAEEARQRELARLEAERIAKEKEEQARLEAERIAKEKEEARLAEEA 1084

Query: 195  HQKDLTMMK-----NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             Q++L  ++        E+ A  + +   +E+   +   E R++   +    R   E  +
Sbjct: 1085 RQRELARLEAERIAKEKEEQARLEAERIAKEKEAARLAEEARQHELARLEAERIAKEKEE 1144

Query: 250  EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            +A LE     KE            A E  +  + E+ R+++   
Sbjct: 1145 QARLEAERIAKEKEEQARLEAERIAKEKEEARLAEEARQRELAR 1188



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 16/207 (7%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL----DFLGKYH 146
            E   L   +    K  +  ++ E+     +  + +    A E+R+ +L     + + K  
Sbjct: 1006 ELARLEAERIAKEKEEQARLEAER-----IAKEKEEARLAEEARQRELARLEAERIAKEK 1060

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-- 204
               +++    I+      ++     R   L RL+ E  +           + +   K   
Sbjct: 1061 EEQARLEAERIAKEKEEARLA-EEARQRELARLEAERIAKEKEEQARLEAERIAKEKEAA 1119

Query: 205  -LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+    +    + ERI  +   E +  +  ++       +   EA    A   +E  
Sbjct: 1120 RLAEEARQHELARLEAERIAKEK--EEQARLEAERIAKEKEEQARLEAE-RIAKEKEEAR 1176

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQK 290
               E  QR  A    K    EK  + +
Sbjct: 1177 LAEEARQRELARLEEKRIAKEKEEQAR 1203



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 66/217 (30%), Gaps = 9/217 (4%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
               +  ++      +K+ + +    I      +    N  D+    +   E+  +  L  
Sbjct: 876  FVLDVKDSGGEAKYEKLDLLDASKAIRDPALKVSLARNHVDLGAYVYSLIEQDGIFRLYN 935

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                  K+    I+   +         R   L RL+ E  +           + +   K 
Sbjct: 936  AKLENEKIEAERIAK-EKEAARLAEEARQRELARLEAERIAKEKEEQARLEAERIAKEKE 994

Query: 205  ---LFEKNAVSQNDLNQQERIVYKSTLELR---ENIHEQKNMLRHINELYDE--ANLEFA 256
               L E+    +    + ERI  +   + R   E I ++K   R   E      A LE  
Sbjct: 995  DARLAEEARQRELARLEAERIAKEKEEQARLEAERIAKEKEEARLAEEARQRELARLEAE 1054

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               KE            A E  +  + E+ R+++   
Sbjct: 1055 RIAKEKEEQARLEAERIAKEKEEARLAEEARQRELAR 1091



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 19/203 (9%), Positives = 58/203 (28%), Gaps = 19/203 (9%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E   L   +    K  +  ++ E+     +  + +    A E+R+ +L     +  +   
Sbjct: 1088 ELARLEAERIAKEKEEQARLEAER-----IAKEKEAARLAEEARQHELARLEAERIAKEK 1142

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +            +  +      +   R+  E + + L     + Q++L  ++       
Sbjct: 1143 E---EQARLEAERIAKEKEEQARLEAERIAKEKEEARLAE--EARQRELARLE------- 1190

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              +  + +++    +   E      E+  +                   + IS +     
Sbjct: 1191 --EKRIAKEKEEQARLEAERIAKEKEEARLAEEARPRNTTTKPVTYKQKEIISANTNAVL 1248

Query: 271  RTFADEMSKLTILEKTREQKTIL 293
               A   +    L    ++  + 
Sbjct: 1249 SDTAMLTALNLQLASRLDRTILT 1271


>gi|256829127|ref|YP_003157855.1| putative phytochrome sensor protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256578303|gb|ACU89439.1| putative phytochrome sensor protein [Desulfomicrobium baculatum DSM
           4028]
          Length = 612

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 56/174 (32%), Gaps = 20/174 (11%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
             + LR + +   EA  +       I       +       ++L + +    +  + +P 
Sbjct: 424 TASRLRQLEQQLQEAVSQHDRAQSSI------IRAQLNQVQAELDLADAQLARTCLTAPF 477

Query: 297 AGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            G IV  + S    +  +Q   L ++ P      I  KV  ++I  V+ G    +     
Sbjct: 478 PGLIVSGDLSQRLGSAVKQGDVLFEVTPLDSYRVI-LKVDERRIADVRVGQRGELVLFSL 536

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                      + KI PI        +   ++ V   +  +     +  LR G 
Sbjct: 537 PGQEFGF---TVSKITPIA----RAEEGSNHFRVEASLDSV-----DQTLRPGM 578


>gi|212212742|ref|YP_002303678.1| multidrug resistance protein A [Coxiella burnetii CbuG_Q212]
 gi|212011152|gb|ACJ18533.1| multidrug resistance protein A [Coxiella burnetii CbuG_Q212]
          Length = 331

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/246 (11%), Positives = 70/246 (28%), Gaps = 24/246 (9%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              + R E+ +       +     F   ++           ++++               
Sbjct: 56  SEIDVRNEEHVQKGQLLFTIDPAPFTIELNKAQAQRDATRQKIQAADTAVKSARATVVER 115

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +A L+  + +   +  L +K  VS++D                    +      H+ E  
Sbjct: 116 KAELTHTRLETKRILTLMKKQFVSRSD-------------------GDLAIKNLHVAEAA 156

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A       + E   +L           + +   +   +   + +P +G I        
Sbjct: 157 LNAAQNQLEEMIEKRGELGDKNAQLRLAQAAVEKAKLDLQYTRVFAPTSGYIANFNLRH- 215

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +     QPL  ++   +  + +A     Q+  +  G  AT++   Y       F   + 
Sbjct: 216 GDVVSAYQPLFALI-EDQTWWAQANFKETQLARIHTGEQATIKLDMYPHQI---FIGKVV 271

Query: 369 KIDPII 374
            ++   
Sbjct: 272 DVNKDS 277



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 15/192 (7%)

Query: 20  MTLLSIIGIIGLITWSI---LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           + +++I+ I G   W         + +   +  I     V       SG + +  V N  
Sbjct: 12  LFIIAILSIGGYFYWQHQNRYPSTDDAYIQADVINVASRV-------SGTVSEIDVRNEE 64

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT-----EKSALDFLNNKYDVLEKAF 131
            + +G  L T +    T  ++  +      R  I       + +    +  K ++     
Sbjct: 65  HVQKGQLLFTIDPAPFTIELNKAQAQRDATRQKIQAADTAVKSARATVVERKAELTHTRL 124

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E++    L        +   +    +     +L     ++  +   R +L +K++ LR  
Sbjct: 125 ETKRILTLMKKQFVSRSDGDLAIKNLHVAEAALNAAQNQLEEMIEKRGELGDKNAQLRLA 184

Query: 192 LSSHQKDLTMMK 203
            ++ +K    ++
Sbjct: 185 QAAVEKAKLDLQ 196


>gi|209920944|ref|YP_002295028.1| hypothetical protein ECSE_3753 [Escherichia coli SE11]
 gi|209914203|dbj|BAG79277.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|324018624|gb|EGB87843.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 117-3]
          Length = 355

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHMRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|149907508|ref|ZP_01896255.1| efflux transporter, MFP subunit, AcrA/E family [Moritella sp. PE36]
 gi|149809178|gb|EDM69107.1| efflux transporter, MFP subunit, AcrA/E family [Moritella sp. PE36]
          Length = 363

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 99/282 (35%), Gaps = 29/282 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +  N    S++R +  ++       L+       + +L+ +  +    +   + L + + 
Sbjct: 35  QRVNESTGSIFREISGQIRSAEQSSLSFR----VNGVLQDIYVNKGDRVVTGQPLAQLDD 90

Query: 211 VS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
                 LN+ +  +  S    +    + +   R    +   A LE      ++S + E  
Sbjct: 91  SDFSVALNKTQASLGSSRASAKAANDQLQRATRLPEGIISLAELE------QLSNNAESA 144

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
            +      + L   +   ++  + SP  G I      + S  A   Q +++++       
Sbjct: 145 LQQVKVFEADLARAKLELQRTILRSPFDGQIAAVNVDNFSKVAN-GQEIIELI-DGDAYE 202

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   +    I ++      TV      D+    F   + +I   +   +        + V
Sbjct: 203 VEVLLPESMIGNINYQQAVTVTVSALRDL---VFAGEVSEIGSRVENGNA-------FPV 252

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            ++        ++ +LRNG    V FT  N+++   ++ P+T
Sbjct: 253 TIR-----LHQSSDKLRNGMSGSVKFTVNNSSIPAYLV-PLT 288



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 70/198 (35%), Gaps = 8/198 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+++   V  G +++ G PL   +D + +  ++  + S+ + R         L       
Sbjct: 66  GVLQDIYVNKGDRVVTGQPLAQLDDSDFSVALNKTQASLGSSRASAKAANDQLQRAT--- 122

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM---RSIYLNRLDL 181
            + E      E + L    +      KVF   ++     L+  + R      I    +D 
Sbjct: 123 RLPEGIISLAELEQLSNNAESALQQVKVFEADLARAKLELQRTILRSPFDGQIAAVNVDN 182

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL--RENIHEQKN 239
            +K +  + ++     D   ++ L  ++ +   +  Q   +   +  +L     + E  +
Sbjct: 183 FSKVANGQEIIELIDGDAYEVEVLLPESMIGNINYQQAVTVTVSALRDLVFAGEVSEIGS 242

Query: 240 MLRHINELYDEANLEFAN 257
            + + N       L  ++
Sbjct: 243 RVENGNAFPVTIRLHQSS 260


>gi|33152154|ref|NP_873507.1| macrolide-specific efflux protein [Haemophilus ducreyi 35000HP]
 gi|33148376|gb|AAP95896.1| probable macrolide-specific efflux protein [Haemophilus ducreyi
           35000HP]
          Length = 390

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 95/302 (31%), Gaps = 28/302 (9%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +  E ++E ++D +    +    +   GI      + +   ++     + L  E +    
Sbjct: 28  RDNEEQKEIIIDVIKG--NIQKNILASGILQAVDQVNIG-AQVSGQIQDILVSEGQYVKK 84

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             LL+     L   +    K   ++ + +Q   +  ++ L+  +   E+   L   N   
Sbjct: 85  GELLAIIDPQLAQSELKLAK---AELESSQANMLAKQAILKQYQTNFERHRKLIKQNASS 141

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +   E    L+    D+   Q        ++T  +       I SP+ GT+V       
Sbjct: 142 QQEFDEARTRLEVAKADIRIAQSNLESANLRVTRAKTQLAYTEIRSPVDGTVVSI----- 196

Query: 309 SNYAQQSQPLM--KIVPH------SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              AQ  Q L   + VP            I AK++   I HV+ G           D   
Sbjct: 197 --IAQSGQTLAAQQQVPTLMTLANIDTMKISAKISEADIMHVQAGAPVAFTLLGEPDKEY 254

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQE--YYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 I+ +   I   +         YY    K+ +     +  ++     A +  T  
Sbjct: 255 YAVLDSIKLVPTHIKSVETGTSNNHAIYYYATFKVPNPE---HKFKIS--MTAAITITLD 309

Query: 419 NT 420
             
Sbjct: 310 RR 311



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 54/140 (38%), Gaps = 2/140 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I+ ++ +SG +   D V  I +  SG I+   V  G  + +G  L   +       + 
Sbjct: 43  GNIQKNILASGILQAVDQV-NIGAQVSGQIQDILVSEGQYVKKGELLAIIDPQLAQSELK 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF-LGKYHSTCSKVFNYG 156
           L K  +++ + ++  +++ L      ++   K  +       +F   +     +K     
Sbjct: 102 LAKAELESSQANMLAKQAILKQYQTNFERHRKLIKQNASSQQEFDEARTRLEVAKADIRI 161

Query: 157 ISSVYRSLKMKLTRMRSIYL 176
             S   S  +++TR ++   
Sbjct: 162 AQSNLESANLRVTRAKTQLA 181


>gi|16263061|ref|NP_435854.1| Membrane protein [Sinorhizobium meliloti 1021]
 gi|14523718|gb|AAK65266.1| Membrane protein [Sinorhizobium meliloti 1021]
          Length = 399

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 100/318 (31%), Gaps = 45/318 (14%)

Query: 95  LIDLKKVSIKNLRCHIDTE-KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +DL    I  LR  +D E ++ +  +   +  L    +    ++ D +    +  +++ 
Sbjct: 32  QVDLAVAEIGLLRVTLDEEGETRVRDVYTLHAPLRGQLQRITAEVGDVVKAGETQLAQIE 91

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLEN-KSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               + +    + +L           +L   + +  +A L+  + +    + L E+  +S
Sbjct: 92  PAPPAFLDVRTEAELQAAVEAARAAHNLAAAELNKAKADLTFAEGERARARQLIERRTIS 151

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q  L   ER  + +   L       K                          +L Q +  
Sbjct: 152 QRTLEDAERSYHVAQANLATAEAALKVR----------------------EHELHQARSR 189

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIR 331
                 ++  L +  E   + +P++G ++     S     +   PL+ I  P      I 
Sbjct: 190 LLS-RQEIRSLREDCECMPVTAPVSGVVLQVMRRSEG-VVEAGTPLLDIGDPTD--LEIV 245

Query: 332 AKVTPKQIQHVKKGYTATV-------------RFPHYADIREKKFKAIIEKIDPIISQQD 378
                +    ++ G  A +             R   +   +        +++D I+   D
Sbjct: 246 VNFLSEDAVRIRPGQRAIITDWGGEDLNAVVRRIEPFGQTQVSALGIEEQRVDVILDFAD 305

Query: 379 NNLQTQEY---YEVILKI 393
                +     Y V +++
Sbjct: 306 PTESWRSLGHGYRVDVQV 323


>gi|300776590|ref|ZP_07086448.1| heavy metal efflux transporter [Chryseobacterium gleum ATCC 35910]
 gi|300502100|gb|EFK33240.1| heavy metal efflux transporter [Chryseobacterium gleum ATCC 35910]
          Length = 437

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 51/120 (42%), Gaps = 2/120 (1%)

Query: 40  IEISVSSSGEILNEDNVV-EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +  ++ ++G +   +N    + S + G+IK   V+ G  + QG  + T  + E    +  
Sbjct: 72  LASTIKANGVLRVPNNRKATVTSLYGGVIKTLTVQIGDYVRQGQVIATISNPEYI-QLQE 130

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           + ++I +   + + E      L +     +K  +S + +L     +  S   ++   GIS
Sbjct: 131 QYLTINSRITYAEQEFRRQKELFDNDAGAKKNLQSSDAELKSLRTQRSSLQRQLQLMGIS 190



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/266 (11%), Positives = 89/266 (33%), Gaps = 41/266 (15%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLN-NKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           T+  +            +  E+     ++    ++ + A   +   +L       +T + 
Sbjct: 35  TEQAEESHEEAPQTIAELTEEQMKSVGISLGTLEMKDLASTIKANGVLRVPNNRKATVTS 94

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYL----NRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++   I ++   +   + + + I        + L+ +   + + ++  +++    K LF+
Sbjct: 95  LYGGVIKTLTVQIGDYVRQGQVIATISNPEYIQLQEQYLTINSRITYAEQEFRRQKELFD 154

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            +A ++ +L         S  EL+    ++ ++ R +                       
Sbjct: 155 NDAGAKKNL-------QSSDAELKSLRTQRSSLQRQL----------------------- 184

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
                              R    I SPI+GT+    +    +Y   S P+++I+  +  
Sbjct: 185 ----QLMGISPGKVSNGNLRSGLVITSPISGTVSTINA-QIGSYVDVSSPVLEII-DNSS 238

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFP 353
            ++  +V  + +  +K G     +  
Sbjct: 239 IHLDLQVFERDLPKMKVGQIVQFKLT 264


>gi|206564170|ref|YP_002234933.1| efflux system transport protein [Burkholderia cenocepacia J2315]
 gi|198040210|emb|CAR56193.1| efflux system transport protein [Burkholderia cenocepacia J2315]
          Length = 396

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 4/101 (3%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 ++  +  +  ++ TI++P+ GT+   +S           PLM IV      +I 
Sbjct: 204 AVVQAAAQFKLAYRNLKRTTIVAPVDGTV-GQRSVQVGQQVGPGVPLMSIV-QLDRLWIE 261

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           A     QI+H++ G    V    Y       ++  ++    
Sbjct: 262 ANFKEGQIRHMRVGQPVEVVSDLYGSRI--AYRGRVQGFSA 300



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 1/87 (1%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L        KR T+   I ++  I W +  L  +     + +     ++V++ +   G 
Sbjct: 19  ALDARRATRRKRFTVFFAIVLLAAIAWTAYWLLSDRYYEDTDDAYVAGSIVQVAAQIPGA 78

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETT 93
           +    V +   +  G  L+  +D E +
Sbjct: 79  VTDVVVADTQAVRAGQTLVRLDDTEAS 105


>gi|170694517|ref|ZP_02885670.1| secretion protein HlyD family protein [Burkholderia graminis C4D1M]
 gi|170140651|gb|EDT08826.1| secretion protein HlyD family protein [Burkholderia graminis C4D1M]
          Length = 440

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 87/276 (31%), Gaps = 34/276 (12%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            + +    L   + ++ S+Y+N        +  ++ L+  Q DL   + + +  AVS   
Sbjct: 121 ALGNAEAMLGQTVRQVSSLYVNNDFYAANIAQKQSDLARAQDDLRRRQAVADTGAVS--- 177

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                           E+I   ++ +       D A  +             +   +   
Sbjct: 178 ---------------AEDIAHARDTVTAAQAALDAARQQAEANRALTDHTTIEQHPSVQA 222

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             SK+        + T+ +P+ G +   +S           PLM +VP +   ++ A   
Sbjct: 223 AASKVRDAYLAYARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMAVVPLNG-VWVDANYK 280

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----------E 385
             Q+++++ G   T+    Y      ++   +             L  Q          +
Sbjct: 281 ESQLRNMRIGQPVTLTADVYGSKV--EYHGRVVGFSAGTGSAFATLPAQNATGNWIKVVQ 338

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                +++       + + +      +V    +++T
Sbjct: 339 RLPARIELDQKELQAHPLRIGLSMQVDVD--TRDST 372


>gi|169632689|ref|YP_001706425.1| hypothetical protein ABSDF0871 [Acinetobacter baumannii SDF]
 gi|169151481|emb|CAP00237.1| conserved hypothetical protein [Acinetobacter baumannii]
          Length = 373

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +  + +++++G+I    W    P    +   G +  E   V + +     I++  V+ G 
Sbjct: 53  IIAVVVIALLGLIIFGLWKSYQP--KPIELQGRVEAET--VHVSTKVPSRIEEIYVQEGQ 108

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           +I +G PL+     E          ++++      T        N   D L   ++S + 
Sbjct: 109 KISKGQPLVRLVSPEIEAKKQQALATLQSALAFQSTVDRGSQQEN--IDTLYANWQSMKA 166

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q  +     +     ++  G+ S  R  +M   +  +  L+    + + +  +   +S Q
Sbjct: 167 Q-ANLAKTTYQRGENLYRQGVISRQRRDEMLAAQTSAQELSEAAYQ-QYARAKRGSTSQQ 224

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIV 223
           K     +    K AVS+    + E  +
Sbjct: 225 KSTADAQVEIAKAAVSEAQALEAETRL 251


>gi|87429102|gb|ABD38131.1| putative MacA [Aggregatibacter actinomycetemcomitans]
          Length = 394

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 48/101 (47%), Gaps = 1/101 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE +V ++G I    N V++ +  SG + K  V+ G Q+ +G  +   +     + ++
Sbjct: 40  GNIEKNVVATGSIE-SINTVDVGAQVSGKVTKLYVKLGQQVKKGDLIAEIDSTTQINTLN 98

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +K ++ + +  +   K+A D   + Y+ L K +  +   L
Sbjct: 99  TRKAALASYQAQLVARKTAYDVALSNYNRLSKLYGQKATSL 139



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 70/230 (30%), Gaps = 36/230 (15%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY---------LKEISR 264
           N LN ++  +     +L          L + N L      +  +          L     
Sbjct: 95  NTLNTRKAALASYQAQLVARKTAYDVALSNYNRLSKLYGQKATSLDTLNTAKATLNNAKA 154

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +++  Q        ++   E       I SPI GT++     S       +Q    I+  
Sbjct: 155 EMDVVQENIKQAEIEVNTAETNVGYTKITSPIDGTVISTPV-SEGQTVNSNQTTPTIIKV 213

Query: 325 SK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           +      I+ +++   I  VK G    V F   +D +   + A I+ +DP  +   +N  
Sbjct: 214 ADLSKMRIKPEISEGDITKVKAGQ--DVTFTILSDNKT-VYHAKIDSVDPATTTISDNSS 270

Query: 383 TQE----------------YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +                  YY   + + +         LR G   E    
Sbjct: 271 SNSSSSGSSSSSGSSSSAVYYYANIIVENPEHV-----LRIGMTTENNIK 315


>gi|82703226|ref|YP_412792.1| secretion protein HlyD [Nitrosospira multiformis ATCC 25196]
 gi|82411291|gb|ABB75400.1| Secretion protein HlyD [Nitrosospira multiformis ATCC 25196]
          Length = 509

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 72/207 (34%), Gaps = 23/207 (11%)

Query: 217 NQQERIVYKSTLELRENIHEQKNML--RHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + +  V K  L L E  ++++  L    I+   D    +      EI+ DL   +    
Sbjct: 245 LRSQYRVAKKRLALAETTYKRERQLWEEKISAKQDYLVAQELLNEAEIAVDLAAVKLQSL 304

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
               +         +  + +PI+G I+  ++ +     ++ + +  I   + ++ + A +
Sbjct: 305 GVEPEAAASSGNLARYEVQAPISGLIID-KTVALGQTLKEDEHIFVI---ADVSTVWAGI 360

Query: 335 T--PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           T  PK +  VK G  A V+          + + ++  I  +I  Q               
Sbjct: 361 TVYPKDLDVVKVGQKAIVKATASD----IEGEGVVIYITTLIGGQTRTA----------- 405

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKN 419
              LA  +   + R G        A+ 
Sbjct: 406 TARLALQNKEGKWRPGMFVTAEMVAEE 432


>gi|261867984|ref|YP_003255906.1| MacA [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413316|gb|ACX82687.1| MacA [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 394

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 48/101 (47%), Gaps = 1/101 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE +V ++G I    N V++ +  SG + K  V+ G Q+ +G  +   +     + ++
Sbjct: 40  GNIEKNVVATGSIE-SINTVDVGAQVSGKVTKLYVKLGQQVKKGDLIAEIDSTTQINTLN 98

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +K ++ + +  +   K+A D   + Y+ L K +  +   L
Sbjct: 99  TRKAALASYQAQLVARKTAYDVALSNYNRLSKLYGQKATSL 139



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 70/230 (30%), Gaps = 36/230 (15%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY---------LKEISR 264
           N LN ++  +     +L          L + N L      +  +          L     
Sbjct: 95  NTLNTRKAALASYQAQLVARKTAYDVALSNYNRLSKLYGQKATSLDTLNTAKATLNNAKA 154

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +++  Q        ++   E       I SPI GT++     S       +Q    I+  
Sbjct: 155 EMDVVQENIKQAEIEVNTAETNVGYTKITSPIDGTVISTPV-SEGQTVNSNQTTPTIIKV 213

Query: 325 SK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           +      I+ +++   I  VK G    V F   +D +   + A I+ +DP  +   +N  
Sbjct: 214 ADLSKMRIKPEISEGDITKVKAGQ--DVTFTILSDNKT-VYHAKIDSVDPATTTISDNSS 270

Query: 383 TQE----------------YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +                  YY   + + +         LR G   E    
Sbjct: 271 SNSSSSGSSSSSGSSSSAVYYYANIIVENPEHV-----LRIGMTTENNIK 315


>gi|225849168|ref|YP_002729332.1| auxiliary transporter, membrane fusion protein (MFP) family
           [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644360|gb|ACN99410.1| putative auxiliary transport protein, membrane fusion protein (MFP)
           family [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 372

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 88/242 (36%), Gaps = 35/242 (14%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLN----RLDLENKSSLLRALLSSHQKDLTMM 202
              +K+ N  I    + +  ++  +R   L     + + + +  + R +  + +K     
Sbjct: 79  QPIAKISNQTIYENIKDIDYQIASIREKLLENSPFQRENQAQIEIKRQVYENAKKIYERR 138

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           K LFEK  +S+                      EQ + +    E+ ++   +     K+ 
Sbjct: 139 KALFEKGLISK----------------------EQFDEVAKNLEVAEKDYKKQLELYKDT 176

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
            +DL    ++ +   +K   LEK  ++  + SP  G ++  +  +  +Y        +IV
Sbjct: 177 LQDLNFQLKSLS---AKKNSLEKELDKYIVKSPTDGKVLR-KFLNEGDYVNSMTQFNQIV 232

Query: 323 PHSKLTYIRAKVTP--KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
                  I   +    + I  +K+G    ++   Y D   K F   I+ I+    +    
Sbjct: 233 SIGNPNKIETVLLVDEEYIPKIKEGMEVLIKLDSYPD---KVFTGKIKTIELQSDRNSRT 289

Query: 381 LQ 382
           ++
Sbjct: 290 VK 291



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 66/173 (38%), Gaps = 12/173 (6%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            SV +SG I    ++V +KS  SG ++K  ++ G  + +G P+    +    + I     
Sbjct: 40  KSVYASGYID-TSDLVVVKSEVSGYVEKMYIKEGDTVKKGQPIAKISNQTIYENIKDIDY 98

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SS 159
            I ++R  +          N+ +    +A    + Q+ +   K +     +F  G+    
Sbjct: 99  QIASIREKL--------LENSPFQRENQAQIEIKRQVYENAKKIYERRKALFEKGLISKE 150

Query: 160 VYRSLKMKLTRMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +  +   L      Y  +L+L ++    L   L S       ++   +K  V
Sbjct: 151 QFDEVAKNLEVAEKDYKKQLELYKDTLQDLNFQLKSLSAKKNSLEKELDKYIV 203


>gi|220919386|ref|YP_002494690.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219957240|gb|ACL67624.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 458

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 69/196 (35%), Gaps = 12/196 (6%)

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L + +   + +++  N    E +   +N   E +R     +R  A   + L+      
Sbjct: 153 AQLEQELARVERLVKTGNASAAELDTARSNLGAERARQQAAVER-VAQAEAALSEARHAL 211

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
              T+ SPI G I   +  ++    + S   + ++ I+        + +V   ++ +VK+
Sbjct: 212 SLTTLASPIDGVITK-RQKTAGERVRGSDLSEDVVLIISTLSKMEAKIEVGEHEVVYVKE 270

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G TA V    + D +       + +   + +Q      T  +  V L +     +     
Sbjct: 271 GDTAEVEIDAFPDQKFPATVVEVARNATVKNQGTEGEVTTFF--VRLALDHPVQNA---- 324

Query: 405 LRNGFPAEVLFTAKNT 420
              G  A+        
Sbjct: 325 -LPGMSAQASIATDTR 339



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/178 (11%), Positives = 60/178 (33%), Gaps = 11/178 (6%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +   PI   V+++G++     V  + +  SG + +     G  + +G  L   +    + 
Sbjct: 71  AKRGPITRLVTAAGKLQAATEVK-LSANVSGDLLELDAHEGDLVKKGQVLGKVDSRRYSA 129

Query: 95  LIDLKKVSIKNLR----------CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            +  +  +  +              ++ E + ++ L    +      ++    L     +
Sbjct: 130 QVAQQTAARASAAADVELEKVKVAQLEQELARVERLVKTGNASAAELDTARSNLGAERAR 189

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +   +V     +       + LT + S     +    K++  R   S   +D+ ++
Sbjct: 190 QQAAVERVAQAEAALSEARHALSLTTLASPIDGVITKRQKTAGERVRGSDLSEDVVLI 247


>gi|86750718|ref|YP_487214.1| secretion protein HlyD [Rhodopseudomonas palustris HaA2]
 gi|86573746|gb|ABD08303.1| Secretion protein HlyD [Rhodopseudomonas palustris HaA2]
          Length = 400

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 61/205 (29%), Gaps = 20/205 (9%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDL 266
             +++ +    ++ + ++  +L       +     +N         F  A  + E S DL
Sbjct: 106 QVIAEVEAPDLDQQLLQARADLASQQASARLSEATLNRRKTLLASNFVSAQEIDERSADL 165

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
              +       + +  LE     K I +P  G +   ++              P M +V 
Sbjct: 166 ANKKAAVNSGQANVERLEALAGYKKITAPFDGVVTE-RNTDVGALISAGSSAGPAMFVVS 224

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 +   V    +  +K G  A +  P Y +       A +E     +       + 
Sbjct: 225 DIAKLRVYVNVPQTYVPMIKIGAKAVITLPEYPNRSFP---ATVEASSQAVDVSSGTTRM 281

Query: 384 QEYYEVILKITDLAFSDNNIELRNG 408
           Q           LA  +   EL  G
Sbjct: 282 Q-----------LALDNAKGELMPG 295


>gi|323702409|ref|ZP_08114073.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           nigrificans DSM 574]
 gi|323532548|gb|EGB22423.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           nigrificans DSM 574]
          Length = 376

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 57/146 (39%), Gaps = 3/146 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           ++   +   + ++GEI    +V  +    SG +    V+ G  + +G  L T E  + ++
Sbjct: 40  AVRTNLTHILGTTGEIQAASDV-AVAPKISGRVAAVHVKVGDHVSKGQVLFTLEATDLSN 98

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   + ++   + +++  + AL      YD  +  F+++    ++F        S    
Sbjct: 99  ALRQAEAALAVNQANLEKAQRALTDAQLNYDRSKTLFDAQAISKVEFEQAESGLISA--Q 156

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLD 180
            G+      L+     + +   N  +
Sbjct: 157 AGLKMAQAQLQQSQVAISTARDNLSN 182



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 62/219 (28%), Gaps = 22/219 (10%)

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             ++      AV+Q +L + +R +  + L       ++   L     +      +  + L
Sbjct: 98  NALRQAEAALAVNQANLEKAQRALTDAQLNY-----DRSKTLFDAQAISKVEFEQAESGL 152

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                 L+  Q         ++         T+ SPI+G +           A      +
Sbjct: 153 ISAQAGLKMAQAQLQQSQVAISTARDNLSNATVTSPISGVVAAVNID-VGEMASPQVTSV 211

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +V       ++  V+   I  +K G    V          K     I  + P      +
Sbjct: 212 TVVQLDST-KVKVNVSENVIDSIKTGTGVPVTIDALN----KTITGTILSVSPKADPTTH 266

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                          ++   +   E++ G  A +  +  
Sbjct: 267 AFAV-----------EIELPNKQGEIKAGMVARLNLSTG 294


>gi|292491800|ref|YP_003527239.1| peptidase C14 caspase catalytic subunit p20 [Nitrosococcus
           halophilus Nc4]
 gi|291580395|gb|ADE14852.1| peptidase C14 caspase catalytic subunit p20 [Nitrosococcus
           halophilus Nc4]
          Length = 823

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/204 (10%), Positives = 68/204 (33%), Gaps = 2/204 (0%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           L  +        D  ++ ++  R  ++  ++ L    +  +  ++   + +EQL      
Sbjct: 213 LRKDATHYKREADSLRLKLQKARHKLEQTQTELQRRQSGVNRSQQELNTLQEQLAQKKAA 272

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              +        + +  R  K KL R + + +   +   +       L            
Sbjct: 273 LADSGRSSEILRLEAQLREQKAKLYRKQQLIVRLEETAVQQRQTLKHLKQGAARFATDTT 332

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             E+    + +L  +   +     +L     + +     + +   +++ + A + ++   
Sbjct: 333 --EEIKTLKAELGHRNEDITALRQQLTATQEQLQKARTDLEQQDKKSSAKLAQFKQQQLL 390

Query: 265 DLEQNQRTFADEMSKLTILEKTRE 288
           +LE+  +  ++ + +     K  E
Sbjct: 391 ELERINQKQSESLEQQKARIKELE 414



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 13/223 (5%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE-KAFESREEQLLDFLGKYHSTC 149
            +   ++  +  +   +  +     + + L  +  + E KA   R++QL+  L +     
Sbjct: 254 RSQQELNTLQEQLAQKKAALADSGRSSEILRLEAQLREQKAKLYRKQQLIVRLEETAVQQ 313

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +   +      R        ++++           + LR  L++ Q+ L   +   E+ 
Sbjct: 314 RQTLKHLKQGAARFATDTTEEIKTLKAELGHRNEDITALRQQLTATQEQLQKARTDLEQQ 373

Query: 210 ---------AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
                       Q  L + ERI  K +  L +     K +   +     E  L       
Sbjct: 374 DKKSSAKLAQFKQQQLLELERINQKQSESLEQQKARIKELETLLATESREKALAQGQGAS 433

Query: 261 EISRDLEQNQRTFA--DEMSKLTILEKTREQKTILSPIAGTIV 301
           +    +            +S+ T    TR       P+ G IV
Sbjct: 434 KKLAAVAPTIEVIEPPLVISRGTPAAHTRSGLEAR-PVVGKIV 475


>gi|255036965|ref|YP_003087586.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
 gi|254949721|gb|ACT94421.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
          Length = 357

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 35/195 (17%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD------------------EMSK 279
             ++  IN+   +A L+   Y +++S+ +E  Q+   +                    ++
Sbjct: 101 GQLIAKINDRELQAQLQKIAYNQDLSKKIEARQKKLLNVEAINLEEYDVTSNNIRVLEAE 160

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
             ++E   E+  I +P +G I   +  S   +     P++ IV  S    I   V  K  
Sbjct: 161 KEVIEAQLEKTEIRAPFSGRI-GLKFISEGAFLAPGTPIVTIV-QSNPVKIDFTVPEKYS 218

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             ++ G T                 A I  +DP + +              L++  LA +
Sbjct: 219 PSIRVGSTVKFNLDG-DPSTY---SAKILAVDPKVDESLRT----------LRVRALANN 264

Query: 400 DNNIELRNGFPAEVL 414
            +      G   +VL
Sbjct: 265 PDG-RFVPGMFVKVL 278



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 11/109 (10%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI--- 96
           IE  + +SG +L  + V  + S  SG + K  ++ G+ I +G  +    D E    +   
Sbjct: 61  IENQIFASGTVLPNEEV-NLMSEISGRLVKLDIKEGAYITKGQLIAKINDRELQAQLQKI 119

Query: 97  ----DLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQL 138
               DL K      +  ++ E   L   D  +N   VLE   E  E QL
Sbjct: 120 AYNQDLSKKIEARQKKLLNVEAINLEEYDVTSNNIRVLEAEKEVIEAQL 168


>gi|124515527|gb|EAY57037.1| Secretion protein (HlyD) [Leptospirillum rubarum]
 gi|206601751|gb|EDZ38234.1| Secretion protein (HlyD) [Leptospirillum sp. Group II '5-way CG']
          Length = 419

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/220 (10%), Positives = 57/220 (25%), Gaps = 39/220 (17%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA------DEMSK 279
              ++   I+  +              L+      +  +  +  Q+          E+ +
Sbjct: 152 RKGDIIAWIYSPELASSETEARIALQALKSNPSWPDNRKIWDAAQKRLRLFGVPETEIER 211

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L      R    + SP +G +    +          +PLM +       ++   +    +
Sbjct: 212 LKQTGTARSVIPVRSPYSGIVTSISAR-IGGAVSPEKPLMTLA-DPTRVWVEVSLYSPDL 269

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             V+ G   T   P       +     +  ++P + +    L           +      
Sbjct: 270 AWVRAGDPVTFHLPSLPSRSYR---GTLRFVNPEVDKTSRTL-----------LARAVVR 315

Query: 400 DNNIELRNGF-----------------PAEVLFTAKNTTL 422
           + +  L+ G                  P E L      T+
Sbjct: 316 NPDGFLKAGMYLEAVLRPAPHPHVLVIPREALIRTGKKTV 355


>gi|83749510|ref|ZP_00946499.1| CzcB [Ralstonia solanacearum UW551]
 gi|207738512|ref|YP_002256905.1| cation efflux protein [Ralstonia solanacearum IPO1609]
 gi|83723822|gb|EAP71011.1| CzcB [Ralstonia solanacearum UW551]
 gi|206591880|emb|CAQ58786.1| cation efflux protein [Ralstonia solanacearum IPO1609]
          Length = 409

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 77/243 (31%), Gaps = 26/243 (10%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL--ELRENIHEQKNMLR 242
           +  +R + +     +   K LF+   +   DL Q E  +  +    +L      +   L 
Sbjct: 107 AGKIRGVYAKVGDTVAKGKPLFD---IESPDLVQAESTLISTAGTRKLTTTALARARQLF 163

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFA------DEMSKLTILEKTREQKTILSPI 296
            I  L  +   +  +  +      +  +   A       +M ++    +T    T+ SPI
Sbjct: 164 EIQGLSQKDLDQATSDQQAAEAAYKAAREAVAIFGKTPAQMDQMIETRRTDPVLTVTSPI 223

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           AG +   ++       Q        V      +++A V    +  ++ G    +R   + 
Sbjct: 224 AGQVTA-RAAQPGLLVQPGSAAPFTVADVSTMWMQAFVPEADVPLLRVGQPVKIRVMAFP 282

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +     F   +  +   +    + +       V  +I D        ELR G       T
Sbjct: 283 NR---VFTGKVTTLGASVDANTHRI------LVRSEIDDP-----KHELRPGMFTAFDIT 328

Query: 417 AKN 419
             +
Sbjct: 329 TGD 331


>gi|307546841|ref|YP_003899320.1| hemolysin D [Halomonas elongata DSM 2581]
 gi|307218865|emb|CBV44135.1| K02005 HlyD family secretion protein [Halomonas elongata DSM 2581]
          Length = 385

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 53/134 (39%), Gaps = 3/134 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E  V++ G +  +D V ++ +  SG + +  V+ G  + QG  L   +       ++  
Sbjct: 49  VEEVVTALGTLEPQDYV-DVGAQVSGQLTELYVDVGDSVEQGQLLAEIDASVQKSRVEAG 107

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  ++ LR   +  ++ L+    +Y   ++  ++       +     S    V    I+ 
Sbjct: 108 QAELEALRAQREQRQAELELARQQYQRQQRLLDADATSDDAYQTARASFA--VTQAQIAV 165

Query: 160 VYRSLKMKLTRMRS 173
           +   ++ K   +  
Sbjct: 166 LQAQIRQKEASVEG 179



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 77/237 (32%), Gaps = 18/237 (7%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             +       + D ++ K+  E    ++ +  + +R   ++ LEL    ++++  L   +
Sbjct: 84  DSVEQGQLLAEIDASVQKSRVEAGQ-AELEALRAQREQRQAELELARQQYQRQQRLLDAD 142

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              D+A              +   Q     + + +     T     I +P AGTIV  ++
Sbjct: 143 ATSDDAYQTARASFAVTQAQIAVLQAQIRQKEASVEGDRTTLGYARIYAPRAGTIVSLEA 202

Query: 306 FSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                    +Q    LM+I        +  +V+   +  +  G            +R   
Sbjct: 203 R-EGQTLNANQTTPTLMRIA-DLSTMTVSTQVSEADVDRLAPGMPVYFHTLGNDQVRY-- 258

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                       + +      +    V+L   +    +++  L +G  A+  F  ++
Sbjct: 259 ----------DSTLRQVLPTPEVVNNVVLYTAEFDVDNDDGRLMSGMTAQAFFVVQS 305


>gi|300950910|ref|ZP_07164788.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 116-1]
 gi|300957369|ref|ZP_07169588.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 175-1]
 gi|300315891|gb|EFJ65675.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 175-1]
 gi|300449769|gb|EFK13389.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 116-1]
          Length = 355

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVVWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|294055578|ref|YP_003549236.1| putative phytochrome sensor protein [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614911|gb|ADE55066.1| putative phytochrome sensor protein [Coraliomargarita akajimensis
           DSM 45221]
          Length = 598

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 236 EQKNMLRHINELYDEANLEFANYLK-EISRDLEQ---NQRTFADEMSKLTILEKTREQKT 291
           +++ +L    EL    +    +  + E   +L +    Q       +K+ +LE    +  
Sbjct: 401 DRRELLVQHAELVANRDRNLTDARRLEGEGELTEMRIAQLAAQQVEAKIKVLEYRLSKTE 460

Query: 292 ILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           + +P AG IV  +     S   Q  + L ++V      Y   +V  + I +++      +
Sbjct: 461 VRAPFAGIIVEGDLRERLSAPVQAGESLYRLVKLEG-LYGELQVDERDINYLQPDMVGQM 519

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
               +      ++   +   +P+   ++    T  Y+ V + ++D      +   R G  
Sbjct: 520 ---AFHSRPYDRYGVELGTFEPVALVEE----TGTYFRVRIHLSDA----PDDWWRPGMS 568

Query: 411 AEVLFTAKNTTLAQEIIH 428
                 A   ++A  ++H
Sbjct: 569 GVCKMDAGKRSVAWILMH 586


>gi|241764954|ref|ZP_04762953.1| efflux transporter, RND family, MFP subunit [Acidovorax delafieldii
           2AN]
 gi|241365473|gb|EER60245.1| efflux transporter, RND family, MFP subunit [Acidovorax delafieldii
           2AN]
          Length = 405

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 67/202 (33%), Gaps = 20/202 (9%)

Query: 220 ERIVYKSTLELRENIHEQ---KNMLRHINELYDEAN-LEFANYLKEISRDLEQNQRTFAD 275
           E        +  + + +    +    + +E+  +   L+  + L++ S +L   Q     
Sbjct: 142 EAQSALQQAQSHQRVAQSDFKRAETLNADEIIPQREFLKAKSELEKASSELRAAQDKLRL 201

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                          ++ +P+AGTIV   +         + PL   V      +I A +T
Sbjct: 202 LGGSAQAGGAAVSTFSLNAPLAGTIVQKTAI-VGELGTPAAPLFT-VADLSRVWIEANLT 259

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              +  V+ G  ATV+   Y     + FK  +  +  ++ +    +         +++  
Sbjct: 260 EDALSKVRVGAEATVKVAAYP---GELFKGRVTYVASLLDKDSRTV------PARIEVD- 309

Query: 396 LAFSDNNIELRNGFPAEVLFTA 417
               + +  L+    A      
Sbjct: 310 ----NKDGRLKPEMFASATIDT 327



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 38/120 (31%), Gaps = 5/120 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET- 92
           + L   +     +  I    + +  +     G I       G  +  G PL   + +   
Sbjct: 83  ASLAFADSITV-TATIRPNQDRIARVAPRVEGRIISVAANLGDAVKAGQPLAVLDSLAIG 141

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                L++          D +++  + LN    + ++ F   + +L     +  +   K+
Sbjct: 142 EAQSALQQAQSHQRVAQSDFKRA--ETLNADEIIPQREFLKAKSELEKASSELRAAQDKL 199


>gi|217970229|ref|YP_002355463.1| efflux transporter RND family, MFP subunit [Thauera sp. MZ1T]
 gi|217507556|gb|ACK54567.1| efflux transporter, RND family, MFP subunit [Thauera sp. MZ1T]
          Length = 388

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 70/203 (34%), Gaps = 16/203 (7%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           ++  ++ +    ++    +Q      + E     + +  +        L+  +       
Sbjct: 121 RRGEVLIEFDAAVQRAELQQARASLTLAESNFRRSQDLFSRSFVSRSSLDNARSQLEVAR 180

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + + + +    +  I +P AG +V  +S S  ++ +  + ++ +        +  ++   
Sbjct: 181 AGVALAQARLARMQIRAPFAG-VVGIRSVSPGDFVKDGEAMINL-EDIATLKVDFRLPEL 238

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  V+ G T  +       +  ++F A +E IDP++  Q   L+              +
Sbjct: 239 YLDRVRPGQTVEI---ASDVLAGERFAATVEAIDPLVDAQGRALRL-----------RAS 284

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
             +  + LR G    V       
Sbjct: 285 LPNPELRLRPGVFVRVRLILAER 307



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/123 (13%), Positives = 40/123 (32%), Gaps = 5/123 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   V + G +   +  V ++   SG I+  +  +G  + +G  L+ F+       +   
Sbjct: 83  LADDVGAVGSL-VSNESVVLRPEVSGRIEAIRFRDGEAVRRGEVLIEFDAAVQRAELQQA 141

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S+     +    +            L+ A      QL           +++    I +
Sbjct: 142 RASLTLAESNFRRSQDLFSRSFVSRSSLDNA----RSQLEVARAGVALAQARLARMQIRA 197

Query: 160 VYR 162
            + 
Sbjct: 198 PFA 200


>gi|206575960|ref|YP_002239872.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|206565018|gb|ACI06794.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
          Length = 380

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 86/296 (29%), Gaps = 48/296 (16%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           ++   +  Q+L       +     F   +  +   +K       S+       + + S  
Sbjct: 75  QSVPVKPNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSLNAALSQAQAELSRA 134

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A     +++    +    + A S   ++ + +        +                  
Sbjct: 135 VAQRDQSRREYARYREGHAQGAFSDQMVDTRLQTWKADEASVSA---------------- 178

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A  +       +   ++    T A  +++L   +   E   + +P  G +      + 
Sbjct: 179 --AQAKVVQARNALDSVVKGKNTTVASLLAQLQKAQFQLENTVVRAPEDGYV-----STV 231

Query: 309 SNYAQQSQ--------PLMKIVPHSKLTYIR--AKVTPKQIQHVKKGYTATVRFPHYADI 358
               +           PLM  VP          A      +Q + KG  A + FP     
Sbjct: 232 G--LRPGTMSTALGMIPLMTFVPVEGAASREYVAAFRQNALQRLHKGEPAELMFPAIPGT 289

Query: 359 REKKFKAIIEKIDPIISQ----------QDNNLQTQEYYEVILKITDLAFSDNNIE 404
               F+  +  + P I +            + L T     V+LK+TD  F++  + 
Sbjct: 290 ---VFRGEVADVLPAIGESQFQGQGKLLTTDALNTHGRALVVLKVTDPRFAEYALP 342



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 51/173 (29%), Gaps = 10/173 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LR 107
             V I S   G ++   V+    + +G  L T +       +D  +  IK        L 
Sbjct: 62  RTVPIVSQVRGRVQSVPVKPNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSLN 121

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
             +   ++ L     + D   + +    E      F  +   T  + +    +SV  +  
Sbjct: 122 AALSQAQAELSRAVAQRDQSRREYARYREGHAQGAFSDQMVDTRLQTWKADEASVSAAQA 181

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLN 217
             +    ++           + L A L   Q  L        E   VS   L 
Sbjct: 182 KVVQARNALDSVVKGKNTTVASLLAQLQKAQFQLENTVVRAPEDGYVSTVGLR 234


>gi|6682319|emb|CAB64662.1| myosin heavy chain [Mytilus galloprovincialis]
          Length = 1705

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 74/195 (37%), Gaps = 5/195 (2%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            +   + +   L   ++     ++  N   + LEK   + ++ + ++  K     S++ N 
Sbjct: 1175 VSSLEKAKNRLTGELEDLGIDVERANANANSLEKKQRAFDKTIQEWQAKVTDLQSELENA 1234

Query: 156  GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
               +  RS   +L R ++ Y    + ++    LR    +  +++  +     +   S ++
Sbjct: 1235 QKEA--RSYSAELFRCKAQYE---ESQDSVEALRRENKNLAEEIHELTEQLSEGGRSVHE 1289

Query: 216  LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
            + + +R +     EL+  + E ++ L           LE +N   EI R L++    F +
Sbjct: 1290 VEKAKRRLEMEKEELQAALEEAESALEQEEAKVMRGQLEISNVRSEIERRLQEKDEEFEN 1349

Query: 276  EMSKLTILEKTREQK 290
                      + +  
Sbjct: 1350 TRRNHQRALDSMQAS 1364


>gi|33240683|ref|NP_875625.1| HlyD family secretion protein [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
 gi|33238211|gb|AAQ00278.1| HlyD family secretion protein [Prochlorococcus marinus subsp.
           marinus str. CCMP1375]
          Length = 353

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 91/272 (33%), Gaps = 41/272 (15%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQ--QERIVY 224
           +        + ++   K    R+L  +  +   + +   ++   V +N L    + R   
Sbjct: 42  IKAEEGKLPSLINASGKLQAQRSLDVNPHRQGIIEEVYVKEGDEVVKNQLLAKIEGRDFK 101

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                L       K       +L+ E  +    Y        E+ Q++F  + + L  ++
Sbjct: 102 YRFNALSAEFENAKAAFERREQLFLEGGISKEKY--------EEFQKSFLIKKANLEQIQ 153

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP-----------LMKIVPHSKLTYIRAK 333
              E+  I SP+ G I   +      +   + P           +++I   S+   + +K
Sbjct: 154 VEGEELFIKSPLEGVITA-RYAEPGMFVSPNSPKSNNETSIKSSVVEI---SQGIEVISK 209

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    I  ++ G   +VR   + D R   F      +  I  +   N     + EV L  
Sbjct: 210 VPESDIGRIQTGQMGSVRVEAFPDERFNSF------VSEIAPRATRNNNVTSF-EVKL-- 260

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN---TTL 422
              +      +LR G  A++ F        T+
Sbjct: 261 ---SLVKPPKKLRIGMTADIEFQTGESGTRTI 289



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 40/113 (35%), Gaps = 18/113 (15%)

Query: 20  MTLLSIIGIIGLITW-----------------SILLPIEISVSSSGEILNEDNVVEIKSP 62
           +    +I I G + W                 +    +   +++SG++  + ++      
Sbjct: 12  LAAFLLIIIGGNVLWKTSSADKKRDIMSYTIKAEEGKLPSLINASGKLQAQRSLDVNPHR 71

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
             GII++  V+ G ++++   L   E  +     +      +N +   +  + 
Sbjct: 72  Q-GIIEEVYVKEGDEVVKNQLLAKIEGRDFKYRFNALSAEFENAKAAFERREQ 123


>gi|37678321|ref|NP_932930.1| multidrug resistance efflux pump [Vibrio vulnificus YJ016]
 gi|37197060|dbj|BAC92901.1| multidrug resistance efflux pump [Vibrio vulnificus YJ016]
          Length = 368

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 65/221 (29%), Gaps = 24/221 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + F   + +    L+       +        +      R  +++ +K++   + L  K 
Sbjct: 90  PRPFELAVKAAKFDLQQAAQSYEADSAAISVAQANEVAARVKVNNAKKNVERNRVLANKG 149

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +SQ        ++     EL             + +   E      +            
Sbjct: 150 TISQ-------AVMDNIIAELETAQAGLAQASSALEKAKQEFGPRGID------------ 190

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                  +++            + +P  G I      +  +YA   QPL+  + ++   +
Sbjct: 191 NPEIQSVLNRQEQALLNLNHTKLTAPANGVITNMDV-AVGDYAAAGQPLLTFI-NNNNLW 248

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           + A V    + H+K G    + F        + ++  I  I
Sbjct: 249 LTAMVRENSLAHLKPGDKVKIVFDA---NPGEVYEGKISSI 286



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/183 (9%), Positives = 53/183 (28%), Gaps = 3/183 (1%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           ++      + +   S  R     I  ++  + W   L  +     + +      ++ I  
Sbjct: 4   NNVQTSAEQSDKKISQARSFTYYIFALVAAL-WLYTLWADRMTPMTDQARVNGQLIRISP 62

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             SG I +  + N S +  G  L+T +       +   K  ++        E  +     
Sbjct: 63  EVSGPISQVLITNNSIVKAGDELVTIDPRPFELAVKAAKFDLQQ--AAQSYEADSAAISV 120

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            + + +    +    +      +  +    +    + ++   L+     +          
Sbjct: 121 AQANEVAARVKVNNAKKNVERNRVLANKGTISQAVMDNIIAELETAQAGLAQASSALEKA 180

Query: 182 ENK 184
           + +
Sbjct: 181 KQE 183


>gi|193068567|ref|ZP_03049529.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E110019]
 gi|192958218|gb|EDV88659.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E110019]
          Length = 378

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAKV 347


>gi|312890593|ref|ZP_07750129.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
 gi|311297051|gb|EFQ74184.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
          Length = 375

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 86/286 (30%), Gaps = 21/286 (7%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           L+   +   T   V          S+     ++     N+ D+   S  +   +S  +  
Sbjct: 25  LELTPEQMQTVGIVVGPVTQKNLDSVIKANGQLAVPPQNKADVSILSGGIIDHISVIEGQ 84

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDEANLEF 255
                 L     +   DL + ++    +      ++     QK +            L  
Sbjct: 85  QVKRGQLLAT--IKNQDLIRIQQDYLAAKNNFTYVQAEYSRQKQLQEAGAGTGKSFQLSE 142

Query: 256 ANYLKEISRDLE-QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
           A Y  E SR    ++Q +            +   Q  +LSPI GT+    + +   + Q 
Sbjct: 143 ATYNAEHSRLTAYESQLSQLGISPGKIASGRIVSQFPVLSPIGGTVGQITANT-GAFVQP 201

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              +M++V  +   +    V  K + HVK G   + +     +   +     I  ++   
Sbjct: 202 GTSIMEVV-DNSKIHCDLTVFEKDLMHVKVGQKVSFQLT---NQENELITGTINGVNKSF 257

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +             + +  +  +     L  G     L +  + 
Sbjct: 258 ENESKG----------VTVHAVINNKQQKNLIPGMYVTALISTGSR 293



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 2/120 (1%)

Query: 40  IEISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           ++  + ++G++ +   N  ++     GII    V  G Q+ +G  L T ++ +    I  
Sbjct: 47  LDSVIKANGQLAVPPQNKADVSILSGGIIDHISVIEGQQVKRGQLLATIKN-QDLIRIQQ 105

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             ++ KN   ++  E S    L        K+F+  E        +  +  S++   GIS
Sbjct: 106 DYLAAKNNFTYVQAEYSRQKQLQEAGAGTGKSFQLSEATYNAEHSRLTAYESQLSQLGIS 165


>gi|218697168|ref|YP_002404835.1| putative HlyD family secretion protein [Escherichia coli 55989]
 gi|218353900|emb|CAV00309.1| putative HlyD family secretion protein [Escherichia coli 55989]
          Length = 355

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAVPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|121607770|ref|YP_995577.1| RND family efflux transporter MFP subunit [Verminephrobacter
           eiseniae EF01-2]
 gi|121552410|gb|ABM56559.1| efflux transporter, RND family, MFP subunit [Verminephrobacter
           eiseniae EF01-2]
          Length = 415

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 22/252 (8%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL----- 228
           +              +A+ S   +   M++       V+Q + +  +R+ +   L     
Sbjct: 54  VQAQAARQMTLRDEAQAVGSLRSRQSVMLRPEV-SGRVTQLNFHDGQRVRHGQLLVQFDD 112

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +L      Q      I +     N E         R LE++        ++L + + T  
Sbjct: 113 QLPRAQIRQSQAELSIAQANHHRNQELVAQGFISQRSLEESAANLEVAQARLALAQATAR 172

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           Q  I++P  G I   +S S  +Y +    ++ +       Y+  ++  +    V+ G  A
Sbjct: 173 QLQIVAPFDG-IAGIRSVSVGDYLKDGADIVNL-EDLDAVYVDFRLPERLQGKVRTGQRA 230

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            V F     +R     A+++ I P I      +                  +  ++LR G
Sbjct: 231 QVAFDALPGVRY---AAVVQAISPQIDADGRAVAV-----------RGCMDNRRLQLRPG 276

Query: 409 FPAEVLFTAKNT 420
             A V       
Sbjct: 277 MFARVTVGFSER 288



 Score = 39.6 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 30/279 (10%), Positives = 72/279 (25%), Gaps = 15/279 (5%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               V ++   SG + +    +G ++  G  L+ F+D      I   +  +   + +   
Sbjct: 76  SRQSVMLRPEVSGRVTQLNFHDGQRVRHGQLLVQFDDQLPRAQIRQSQAELSIAQANHHR 135

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY---GISSVYRSLKMKLT 169
            +  +         LE++  + E           +           GI+ +         
Sbjct: 136 NQELVAQGFISQRSLEESAANLEVAQARLALAQATARQLQIVAPFDGIAGIRSVSVGDYL 195

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +  +  +N  DL+      R       K  T  +     +A+         + +      
Sbjct: 196 KDGADIVNLEDLDAVYVDFRLPERLQGKVRTGQRAQVAFDALPGVRYAAVVQAISPQIDA 255

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS-----KLTILE 284
               +  +  M     +L             E    L   +     E +     K+    
Sbjct: 256 DGRAVAVRGCMDNRRLQLRPGMFARVTVGFSERGDALVIPEEAIVPEAASPYVLKIVAGP 315

Query: 285 KTREQKTILSPIA------GTIVYNQSFSSSN-YAQQSQ 316
           +   +    +P+       G +         +      Q
Sbjct: 316 QAGSRVARRTPVRLGLRAPGWVQVLDGLQVGDLVVTAGQ 354


>gi|77458622|ref|YP_348127.1| secretion protein HlyD [Pseudomonas fluorescens Pf0-1]
 gi|77382625|gb|ABA74138.1| heavy metal RND efflux membrane fusion protein, CzcB family
           [Pseudomonas fluorescens Pf0-1]
          Length = 417

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 65/224 (29%), Gaps = 37/224 (16%)

Query: 220 ERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF---AD 275
           ER+  ++  + L         ++        E      +   ++     Q  R     A 
Sbjct: 140 ERVYARAPGDVLTAGTALADILVPEWTAAQSEFLALRRSGDADLIAAARQRLRLTGMPAS 199

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            ++++    K + + T+ SP+ G +      +        + L ++   + +    A V 
Sbjct: 200 LIAQVERSGKVQSELTVTSPLGGVLQALDVRA-GMTVASGETLARVNGLNSVWLAVA-VP 257

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
             Q   V  G     R P +       F   +  I P  +     L       V +++T 
Sbjct: 258 ESQTGSVAVGQAVEARLPAFPGR---VFNGTVSAILPDTNPDSRTL------RVRVELT- 307

Query: 396 LAFSDNNIELRNGFPA-----------------EVLFTAKNTTL 422
               + +  LR G  A                 E +       L
Sbjct: 308 ----NADGRLRPGMTAQVRLNRSTGQDSLSVPSEAVIRTGKRAL 347


>gi|326792211|ref|YP_004310032.1| hypothetical protein Clole_3139 [Clostridium lentocellum DSM 5427]
 gi|326542975|gb|ADZ84834.1| hypothetical protein Clole_3139 [Clostridium lentocellum DSM 5427]
          Length = 387

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 125/358 (34%), Gaps = 50/358 (13%)

Query: 67  IKKFQVENGSQILQGT--PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS-----ALDF 119
           ++  +V+ G  + +G    LL +E  + + L+  K+ +++++       ++      +  
Sbjct: 70  VEAIKVKEGQIVKKGEELVLLNYEPYKQSILLKEKEGTLESITAEAKLTEATGQVKNITA 129

Query: 120 LNNKYDVLEKAF-ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           LN +  +LEK   + ++ ++L    +  +   ++    +   Y+     L    S     
Sbjct: 130 LNEELSLLEKRLTDGQDPEILSIESELTTIRQQL--EDLEEDYKVQTALLEVGGSSSKII 187

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             +E + + L+  + + +   +    L ++  +   +L + +  +  +   L     +  
Sbjct: 188 KGIETQKTTLQTQIDTLEAKKS---TLVKEKTL---ELEKLKAEIANAKDGL-STTEKGN 240

Query: 239 NMLRHINELYDEA-NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           N +   + L DE  NLE +    +  +   ++     D  S +       E   +    +
Sbjct: 241 NAMVQTSALKDEIGNLEISMMRDKFQKSYIKDNAIITDIESAIISKINVVEGSRV-GEQS 299

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G+++                            I A V  + I+ V  G    +    YAD
Sbjct: 300 GSVLRLI-------------------DQNSLKITAHVPEEFIKSVAIGSEVEI--VPYAD 338

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +       +  I     +++          + +++T    S     L+ G+  +V  
Sbjct: 339 -KTISLPGKVTAIAGEAVKENGET------VINIEVTPDEVSP---YLQAGYGVDVFI 386


>gi|218550768|ref|YP_002384559.1| HlyD family secretion protein [Escherichia fergusonii ATCC 35469]
 gi|218358309|emb|CAQ90956.1| putative HlyD family secretion protein [Escherichia fergusonii ATCC
           35469]
          Length = 355

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAVVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAHRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|90424518|ref|YP_532888.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90106532|gb|ABD88569.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 363

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 81/227 (35%), Gaps = 32/227 (14%)

Query: 210 AVSQNDLNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLEF------------A 256
           AV + D+  Q +++ +   +L    + +QK  +  +      A  +             A
Sbjct: 77  AVDEGDVVAQGQVLARLNQDLTTAALAKQKAAIDELQASLAIARSDAARARAVSSGVISA 136

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             +++    ++  +       ++L   E  R Q  I++P AGTI   +S +     Q   
Sbjct: 137 QVIEQRETLVKTTEAKLQAAQAQLDDAEARRRQTVIVAPAAGTIAS-RSVAIGQVVQAGV 195

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            + +++       + A+V  + +       TAT+  P       K  + ++  + PI+  
Sbjct: 196 EMFRLI-QDDRVEVDARVLEQDLIAAAARQTATIIGPS-----GKAEQGVVRAVSPIVDP 249

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           +           V + +        +  L+ G  A V    ++  + 
Sbjct: 250 KTRLGT------VRIAL------PRDTPLKPGMFARVAIAVESKLVL 284



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 63/192 (32%), Gaps = 12/192 (6%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDIETTDLI 96
             I  S++++G ++    +  I S   G+ I +  V+ G  + QG  L       TT  +
Sbjct: 44  SEITGSITATGNVVAWREI-PISSEVGGLAITQIAVDEGDVVAQGQVLARLNQDLTTAAL 102

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             +K +I  L+  +   +S           +          +   + +   T  K     
Sbjct: 103 AKQKAAIDELQASLAIARSDAARARAVSSGV----------ISAQVIEQRETLVKTTEAK 152

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + +    L     R R   +        +S   A+    Q  + M + + +        +
Sbjct: 153 LQAAQAQLDDAEARRRQTVIVAPAAGTIASRSVAIGQVVQAGVEMFRLIQDDRVEVDARV 212

Query: 217 NQQERIVYKSTL 228
            +Q+ I   +  
Sbjct: 213 LEQDLIAAAARQ 224


>gi|312218534|emb|CBX98480.1| hypothetical protein [Leptosphaeria maculans]
          Length = 1141

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 74/220 (33%), Gaps = 22/220 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           T  ++  + +I +    ++  +   D  + + DV+      R++ L +   + ++   +V
Sbjct: 749 TRELETARQTISDRDAELEALRDHADEPDTQIDVMHSLVRKRDDDLENLREELNAQRGQV 808

Query: 153 FNYGISSV--------------------YRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
                 +                        +++       +   +  LE K  LL +++
Sbjct: 809 EELQRLAEERLEALEELRDEARREKEDYEAEIEVLQEDADEVAEEKASLEEKIILLESMI 868

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              +     +++  E  A  +      E  +     +LRE   +Q+ +L        E  
Sbjct: 869 REKENQAGALQS--ESRAAQREQKAALEEKIRGLESKLREKDSQQRKLLSEAKATAREQK 926

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           L   N L+++   L + +       +    ++   +Q  I
Sbjct: 927 LTLENELRDLQSRLREKESQLRLTQASAKAIQHKADQDAI 966



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 66/203 (32%), Gaps = 3/203 (1%)

Query: 88  EDIETTDLIDLKKVSIK-NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           +  E    +D +  S++   R  +  ++  L   N+K   LE    S +      + K  
Sbjct: 343 DQAERIAELDAQLQSLRQAQRNDLADKERLLAEQNDKIKDLEDQLRSLQRSKEAKINKLQ 402

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                  N     +           R +     +   +   +   L S +++        
Sbjct: 403 DRIEAADNEKDQEIRELELKLEEAERELDAANDEKRQELGRVEERLRSLEREKDADIKEL 462

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           ++   S     Q E    +  +EL E+  + +  L    +  ++A  +  +  +E   +L
Sbjct: 463 QRRLQSVQHEKQAELEAVRERVELAESQGDNQVQLAQ--QSANDARQKVLDITREKGVEL 520

Query: 267 EQNQRTFADEMSKLTILEKTREQ 289
           E  Q       ++   LE  R Q
Sbjct: 521 ELLQARVDAAETRADELEDYRRQ 543



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 70/202 (34%), Gaps = 14/202 (6%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +  ++  ++ +       K  + FL      +   F  +  +    L     T S+    
Sbjct: 160 LREQEARLEQIDKENFGLKLKIHFLEENLKKMGPEFNIKALEENINLKSEKVTMSR---- 215

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +    + LK     + S      +   K    R +    ++++  ++ L ++ A   + 
Sbjct: 216 DMKQYMKDLKNAEKELDSYKQQLREYAEKVKR-RHVDEGLREEMDELRKLADERAAEIDK 274

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINE---LYDEANLEFANYLKEISRD------L 266
           L  +      +  EL +   E +     +++   L DE +       KE+         L
Sbjct: 275 LEDKVEEARNAEAELEKVSAELEEAQAEVSKRDRLLDEHDDRIEELEKELEAQSSRSAGL 334

Query: 267 EQNQRTFADEMSKLTILEKTRE 288
           E+ +R  AD+  ++  L+   +
Sbjct: 335 EEKEREIADQAERIAELDAQLQ 356



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 69/200 (34%), Gaps = 6/200 (3%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           L  E +  +  +      +KN    +D+ K  L     K  V  +  +    + +D L K
Sbjct: 206 LKSEKVTMSRDMKQYMKDLKNAEKELDSYKQQLREYAEK--VKRRHVDEGLREEMDELRK 263

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                +   +     V  +   +   +  +     + + + S    LL  H   +  ++ 
Sbjct: 264 LADERAAEIDKLEDKVEEARNAE-AELEKVSAELEEAQAEVSKRDRLLDEHDDRIEELEK 322

Query: 205 LFEKNAVSQNDLNQQERIVYKST---LELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             E  +     L ++ER +        EL   +   +   R+     +    E  + +K+
Sbjct: 323 ELEAQSSRSAGLEEKEREIADQAERIAELDAQLQSLRQAQRNDLADKERLLAEQNDKIKD 382

Query: 262 ISRDLEQNQRTFADEMSKLT 281
           +   L   QR+   +++KL 
Sbjct: 383 LEDQLRSLQRSKEAKINKLQ 402


>gi|120553248|ref|YP_957599.1| RND family efflux transporter MFP subunit [Marinobacter aquaeolei
           VT8]
 gi|120323097|gb|ABM17412.1| efflux transporter, RND family, MFP subunit [Marinobacter aquaeolei
           VT8]
          Length = 413

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 15/284 (5%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   ++  I +  +G I +  V  G Q+ +G  L+  +  +   ++   +  + +L   +
Sbjct: 60  VVAPDLQTITATLAGRIDRLPVREGQQVSEGDLLVALDSADIEPVLAQARAQVADLEAQV 119

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            +E+          +  +   ++   Q   +  L + +    +       ++ R+     
Sbjct: 120 RSEQVRYRNDQRSLESEKAILDNARRQFERIQSLVERNLASRENLEAATDALARAELTVR 179

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           TR R+I  +   L++  + L    +S          L  + AVS    +     V    +
Sbjct: 180 TRERAIAEHPARLQSLEARLSQARASL-----STAELDGERAVSTAPFDGM---VTNLQV 231

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFAN-YLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              + +   + +L        E        YL E+   L +     A      +      
Sbjct: 232 AAGDQVSRNQALLSIYPIQGLEVRARVPKMYLGELVDALAKGATLTATTED--SGQRFEL 289

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHSKLTY 329
            +   LS  AGT    +    S   +    QPL+   P      
Sbjct: 290 VRFAGLSDPAGTEAVLELNGESGALRPGALQPLLLQRPARDNLI 333


>gi|294101406|ref|YP_003553264.1| efflux transporter, RND family, MFP subunit [Aminobacterium
           colombiense DSM 12261]
 gi|293616386|gb|ADE56540.1| efflux transporter, RND family, MFP subunit [Aminobacterium
           colombiense DSM 12261]
          Length = 426

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 103/313 (32%), Gaps = 36/313 (11%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           + ++ + L F  +   +     +       D + +      KV      S   + K +L+
Sbjct: 62  LASKTADLSFRVSGPLIELPVKKGEPINKGDLVAQIDPRDFKVQLMNAQSALNNAKAQLS 121

Query: 170 RMRS--IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
            MR+         L ++ +  +A L+  + D   M+ LF++  V+Q DL + +     + 
Sbjct: 122 AMRAGARREEISALSSQVASAKAKLAEAEADYKRMERLFKEGVVAQVDLERSKTTYEVAK 181

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            E+     E +                          D+   + T     S++   +   
Sbjct: 182 GEVNAASQELQKAKSGARA-----------------EDIAAMEATIQGLESQVQAAQSAL 224

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH--VKKG 345
           +   + +P  G I      +  +  Q+ QP++ +    ++  +   +  + I    +   
Sbjct: 225 DDTELKAPFKGIIAARYVDNFQSV-QKDQPIVSLQNLEEVEIV-ISIPEQDIMKFRLNTS 282

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
              +  F    + +       I          + + QTQ Y      +T       +I +
Sbjct: 283 LGVSSSFEAAPNTQYSLVFKEIS--------TEADPQTQTY-----AVTFTMPYPKDIVV 329

Query: 406 RNGFPAEVLFTAK 418
             G  A V FT +
Sbjct: 330 LPGMTANVEFTGQ 342



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 50/157 (31%), Gaps = 2/157 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V+ G  I +G  +   +  +    +   + ++ N +  +   ++        
Sbjct: 74  SGPLIELPVKKGEPINKGDLVAQIDPRDFKVQLMNAQSALNNAKAQLSAMRAGARREEIS 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               + A    +    +   K      K        + RS          +     +L+ 
Sbjct: 134 ALSSQVASAKAKLAEAEADYKRMERLFKEGVVAQVDLERSKTTYEVAKGEVNAASQELQK 193

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             S  RA   +  +    ++ L  +   +Q+ L+  E
Sbjct: 194 AKSGARAEDIAAME--ATIQGLESQVQAAQSALDDTE 228


>gi|269963949|ref|ZP_06178259.1| Membrane-fusion protein [Vibrio harveyi 1DA3]
 gi|269831324|gb|EEZ85473.1| Membrane-fusion protein [Vibrio harveyi 1DA3]
          Length = 379

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G I+   + V IKS   GI+ +  V+ G ++ QG PL+      T   +   
Sbjct: 43  IEKQAVAVGNIVPA-HSVSIKSQIDGIVGEIYVQVGEKVKQGQPLIKVRPNPTPQALTDA 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
              +  +R   D E +     N +  V +    +  ++ +       S  + V     + 
Sbjct: 102 STDL--MRSEADLESAKQKLANLESLVKQDIIPNNYDEYVSARSTVKSAQANVLQKRQNL 159

Query: 159 SVYRSLKMKLTRMR-----------SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLF 206
            + RS +  +   R           ++   ++++ E   S   +  ++    L  M +L 
Sbjct: 160 ELIRSGEASIGNARLTSTIYAPIDGTVLNRKVEVGEPIISTESSQAATEMMSLADMNSLI 219

Query: 207 EKNAVSQNDLNQQ 219
            K +VS++D  Q 
Sbjct: 220 FKGSVSEHDAAQL 232



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 77/219 (35%), Gaps = 21/219 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +  DL + E  +  +  +L       K  +  I   YDE  +   + +K    ++ Q ++
Sbjct: 101 ASTDLMRSEADLESAKQKLANLESLVKQDI--IPNNYDEY-VSARSTVKSAQANVLQKRQ 157

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHS 325
                 S    +   R   TI +PI GT++  +              Q +  +M +    
Sbjct: 158 NLELIRSGEASIGNARLTSTIYAPIDGTVLNRKV-EVGEPIISTESSQAATEMMSLA-DM 215

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
                +  V+      +  G    +    Y D+   +   ++ K+  I S+  N+ +   
Sbjct: 216 NSLIFKGSVSEHDAAQLSPGMPVLLTVAPYPDV---EISGVLTKV-AIQSENLNSPEGNA 271

Query: 386 YYE-----VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +       +++ +L      + LR+GF +    T K 
Sbjct: 272 SAKSFDNGFEVEVGELKIPPEVL-LRSGFSSNAQITLKK 309


>gi|254474029|ref|ZP_05087422.1| multidrug efflux RND membrane fusion protein [Pseudovibrio sp.
           JE062]
 gi|211956918|gb|EEA92125.1| multidrug efflux RND membrane fusion protein [Pseudovibrio sp.
           JE062]
          Length = 384

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 64/189 (33%), Gaps = 18/189 (9%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDLEQNQRTFADEMSKLTILE 284
            L+  + + + K++           + +   Y       + ++ +     +   ++    
Sbjct: 107 ELDTTQEVAQLKSLQAQETLARQTLDRDLKQYKVNAVSKQQIDVDWSNLKNLQGQVQNQL 166

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
               +K I +P +G  +  +  S        Q  + +       ++   +  + +  +K+
Sbjct: 167 AIIAKKNIRAPFSGR-LGIRQVSVGQLLNPGQAYVNLQQLDD-LFVDFYIPQRFLSTIKQ 224

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G    V    Y D+     K  +  ID  ++  + N          ++     F++ N E
Sbjct: 225 GQEIEVSVDTYPDLT---IKGKVVAIDAQVTVTNGN--------ARVR---GRFANPNKE 270

Query: 405 LRNGFPAEV 413
           L  G  A+V
Sbjct: 271 LIPGMFADV 279



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 39/122 (31%), Gaps = 3/122 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL---DFLN 121
           G I      +G  + +G  L+  +  +    +   +      R  +D +           
Sbjct: 86  GTITHINFSSGEDVPKGMLLIELDTTQEVAQLKSLQAQETLARQTLDRDLKQYKVNAVSK 145

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            + DV     ++ + Q+ + L        +    G   + +    +L      Y+N   L
Sbjct: 146 QQIDVDWSNLKNLQGQVQNQLAIIAKKNIRAPFSGRLGIRQVSVGQLLNPGQAYVNLQQL 205

Query: 182 EN 183
           ++
Sbjct: 206 DD 207


>gi|188577137|ref|YP_001914066.1| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188521589|gb|ACD59534.1| multidrug resistance efflux pump [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 372

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 82/268 (30%), Gaps = 28/268 (10%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +     +L   + ++R +Y +    + + S     L S + D    K+L    A+S 
Sbjct: 72  EGAVQQAEANLAKTVRQVRGLYRSVEGAQAELSAREVALRSARSDFARRKDLASTGAISN 131

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L                     ++ L         +   F      +      NQ   
Sbjct: 132 EEL------------------AHARDELAVAEAAVSGSRESFERNRALVDDSAVANQPDV 173

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               ++L        +  +++P++G +   ++       Q    LM +VP  +  ++ A 
Sbjct: 174 QAAAAQLRQAYLNHARTGVVAPVSGYVAR-RAAQVGQRVQPGSVLMLVVPL-EQVWVEAN 231

Query: 334 VTPKQIQHVKKGYTATVRFPHYAD--IREKKFKAI-IEKIDPIISQQDNNLQTQ-----E 385
               Q++H++ G    +    Y        + +++ +            N         +
Sbjct: 232 FKETQLKHMRLGQEVELHSDLYGGGVSYTGRIQSLGLGTGSAFSLLPAQNASGNWIKIVQ 291

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
              V + +     + N + +      EV
Sbjct: 292 RVPVRIAVDSKQLASNPLRIGLSMKVEV 319



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 69/185 (37%), Gaps = 17/185 (9%)

Query: 20  MTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           M +++I+ IIGL+ W  L+       + +         + N V+I     G +     E+
Sbjct: 1   MAIVAILAIIGLVVWYFLVGRWHEDTDDA-------YVQGNQVQITPMVGGTVVSIGAED 53

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++ +G  L+  +  +T   +   + ++      +     +++    +    E A  S 
Sbjct: 54  GMRVERGQLLVQLDPADTEGAVQQAEANLAKTVRQVRGLYRSVEGAQAELSAREVALRSA 113

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                    K  ++   + N  ++     L +      ++  +R   E   +L+     +
Sbjct: 114 RSDFA--RRKDLASTGAISNEELAHARDELAVAEA---AVSGSRESFERNRALVDDSAVA 168

Query: 195 HQKDL 199
           +Q D+
Sbjct: 169 NQPDV 173


>gi|158339775|ref|YP_001520782.1| RND family efflux transporter MFP subunit [Acaryochloris marina
           MBIC11017]
 gi|158310016|gb|ABW31632.1| efflux transporter, RND family, MFP subunit [Acaryochloris marina
           MBIC11017]
          Length = 417

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 60/206 (29%), Gaps = 21/206 (10%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS--LLRALLSSHQKDL 199
           L    +   +V +  + +        L  +R+   +      +SS   L + L   Q   
Sbjct: 78  LAYLDTQKLRVKHQELIAGRNQTNALLKELRTGSRSETIAAARSSVKNLDSQLKLAQSRH 137

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              + L+   A+ +  L++    V      L E   +   +L        EA        
Sbjct: 138 QRRQALYTAGAIPREHLDEATTEVNTVQARLNEAQSQLDKVLTGSRPEKIEAQT------ 191

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                             ++L  LE    Q  + +P  G I  N+           QP++
Sbjct: 192 -----------AALEQLEARLDGLEIDLRQSILRAPFTGRI-ANRLVDEGTVVSAGQPIL 239

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKG 345
            ++   +       V  +    +  G
Sbjct: 240 TLL-EDQALEAHVGVPVEAATQIPIG 264



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 84/296 (28%), Gaps = 42/296 (14%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  ++ G Q+ +GTPL   +               + LR       +  +  N   
Sbjct: 59  GKLLRLTIDQGDQVERGTPLAYLDT--------------QKLRVKHQELIAGRNQTNALL 104

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L     S          K   +  K+                     +     ++   
Sbjct: 105 KELRTGSRSETIAAARSSVKNLDSQLKLAQSRHQRRQALYTAGAIPREHLDEATTEVNTV 164

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            + L    S   K LT  +   EK       L Q E  +    ++LR++I          
Sbjct: 165 QARLNEAQSQLDKVLTGSRP--EKIEAQTAALEQLEARLDGLEIDLRQSIL--------- 213

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA------- 297
                      A +   I+  L       +     LT+LE    +  +  P+        
Sbjct: 214 ----------RAPFTGRIANRLVDEGTVVSAGQPILTLLEDQALEAHVGVPVEAATQIPI 263

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           G+  +         A+    L +I P ++   +   + P   + V+ G    ++  
Sbjct: 264 GSNQHLVIGKEQYEAEVIATLPQIDPVTRTLTVVLHIEPSASREVRSGQITRLKLT 319


>gi|157963235|ref|YP_001503269.1| secretion protein HlyD family protein [Shewanella pealeana ATCC
           700345]
 gi|157848235|gb|ABV88734.1| secretion protein HlyD family protein [Shewanella pealeana ATCC
           700345]
          Length = 355

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 66/217 (30%), Gaps = 21/217 (9%)

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           K     ++ +   +     +L+    +  ++Y      E K +  +A   + + +   + 
Sbjct: 72  KLFRIDARKYQLALEKALLALEQAHEQEEAMYAKVEVAEAKVATNQAAFDNARSEYRRIS 131

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L ++  VS + L+        S   LR    E + +   +     ++            
Sbjct: 132 QLAKQKLVSVSMLDNALANNNASGANLRAAQQELRALTVQLGSQPGQS------------ 179

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
                        ++ L   +       +++P  G +   Q     + A  + PL+  +P
Sbjct: 180 -------SGVRSALNALKQAKLDLSHTQVVAPSDGVVTNLQL-EVGSIANANMPLLTFIP 231

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                ++ A    K +  +       V F  +     
Sbjct: 232 TDS-LWVAADFREKAVARINSHSRGLVAFDAFPGRVF 267



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 75/194 (38%), Gaps = 12/194 (6%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWS-ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
             +      +  L+  I +IG I  +    P+       G ++      +I    +G + 
Sbjct: 4   AEHAFRRWMQSLLVIFIILIGYIVIADRYAPLTTESRVQGYVI------QIAPEVTGSVT 57

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + QV N  ++ +G  L   +  +    ++   ++++      +   + ++    K    +
Sbjct: 58  EVQVYNNQKLTKGDKLFRIDARKYQLALEKALLALEQAHEQEEAMYAKVEVAEAKVATNQ 117

Query: 129 KAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRS---LKMKLTRMRSIYLNRLDLEN 183
            AF++   +   +  L K       + +  +++   S   L+     +R++ +       
Sbjct: 118 AAFDNARSEYRRISQLAKQKLVSVSMLDNALANNNASGANLRAAQQELRALTVQLGSQPG 177

Query: 184 KSSLLRALLSSHQK 197
           +SS +R+ L++ ++
Sbjct: 178 QSSGVRSALNALKQ 191


>gi|146302192|ref|YP_001196783.1| RND family efflux transporter MFP subunit [Flavobacterium
           johnsoniae UW101]
 gi|146156610|gb|ABQ07464.1| efflux transporter, RND family, MFP subunit [Flavobacterium
           johnsoniae UW101]
          Length = 391

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 65/208 (31%), Gaps = 24/208 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q D  Q +  ++ + L+ +    +        +++   A  E +N    +   L Q  R 
Sbjct: 129 QQDYLQAKSKLHFAQLDYQRQ-KDLNQSQASSDKVMQTAQAEVSNQQI-MMNALAQQLRL 186

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIR 331
                + L    K  +   + S I G +          Y   S  L ++V P+    ++ 
Sbjct: 187 VNINPNSLN-ANKITKTIPVYSTINGFVSKVNVN-IGKYVNPSDILFELVNPND--LHLN 242

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            KV    I  +K G     +   Y++    KK++  I  I   IS               
Sbjct: 243 LKVYENDIDKLKIGQ----KLMAYSNAEPGKKYEGEIILISKDISSDG------------ 286

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +      F   N  L  G         K
Sbjct: 287 ISEVHCHFDPYNKSLLPGMYMNAEIETK 314


>gi|86159394|ref|YP_466179.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775905|gb|ABC82742.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 429

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 89/291 (30%), Gaps = 56/291 (19%)

Query: 137 QLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTR--MRSIYLNRLDLENKSSLLRALL 192
           Q+   +    S     FN  +    V   +  +L R  +     N +  E   +  RA  
Sbjct: 63  QVGSQVSGRISELHADFNSRVRKGEVIARIDPQLFRAAVAQAKANTVAAEGNLAKARAQA 122

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +  ++ L   + L E+N V+  DL+  +     +   ++                     
Sbjct: 123 ADAERQLGRTRQLAERNLVAAADLDTAQANADGARAAVQA-------------------- 162

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                            Q T A   + L   +       I+SP  G ++           
Sbjct: 163 ----------------AQGTVAQARAALQQAQVNLGYTDIVSPTNGVVISRNVD-VGQTV 205

Query: 313 QQS--QPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
             S   P++ ++        +   V    +  ++ G  AT     Y +     F   + +
Sbjct: 206 AASLQAPILFVIAEDLAKMQVDTSVAEADVGRLRAGMPATFTVDAYPNE---VFSGTVRQ 262

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +    +   N +     Y+ ++ +     ++ +++L+ G  A V F     
Sbjct: 263 VRNAATTVQNVVT----YDAVVDV-----ANPDLKLKPGMTATVTFVYAQR 304


>gi|332992028|gb|AEF02083.1| RND family efflux transporter MFP subunit [Alteromonas sp. SN2]
          Length = 415

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 91/299 (30%), Gaps = 31/299 (10%)

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G       D+   +  ++   S        + E+        K   +     +  E
Sbjct: 38  VVSSGDV-----DVLKVEQGNIDLFSQAFGELFSEQERLLTSQAAGKVAEIYLRPGAHVE 92

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                L   +   ++ +   +           +        RLD +++ + + A L   Q
Sbjct: 93  PSTVILSLANPELNRTYQSAVGDYNAQKVQLESFELEQQNERLDYQSRMADIEAALERGQ 152

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +L++ K L  +   ++ ++ + E  V +   +L                       ++ 
Sbjct: 153 LELSVNKQLSARGVSAKLEIQRAELTVKQEAKKLEFE------------------RQKYQ 194

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           ++LK  +  L+Q Q        ++ +L    +   + + I GT+             Q  
Sbjct: 195 HFLKVQAFQLKQRQIELEQLNQQVALLLSQLDDMQVKAGIYGTLQSLDV-EIGETLPQG- 252

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            ++  V        R +V   Q   +  G    +        R+ +    +  I  ++S
Sbjct: 253 TVLGKVGSVDKLLARLRVPQHQADQITVGAPVEL------TTRKGQISGEVNLIGSVVS 305



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 38/327 (11%), Positives = 107/327 (32%), Gaps = 40/327 (12%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I++   + GE+ +E     + S  +G + +  +  G+ +   T +L+  + E      
Sbjct: 52  GNIDLFSQAFGELFSEQER-LLTSQAAGKVAEIYLRPGAHVEPSTVILSLANPELNRTYQ 110

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                    +  +++    L+  N + D   +  +   E  L+      S   ++   G+
Sbjct: 111 SAVGDYNAQKVQLESF--ELEQQNERLDYQSRMAD--IEAALERGQLELSVNKQLSARGV 166

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           S+     + +LT  +       + +     L+      ++    ++ L ++ A+  + L+
Sbjct: 167 SAKLEIQRAELTVKQEAKKLEFERQKYQHFLKVQAFQLKQRQIELEQLNQQVALLLSQLD 226

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             + +       L+    E    L                        +     +    +
Sbjct: 227 DMQ-VKAGIYGTLQSLDVEIGETLPQ--------------------GTVLGKVGSVDKLL 265

Query: 278 SKLTILEKTREQKTILSPIA-----GTIVYNQSFSSSNYAQQSQPLMKI-----VPHSKL 327
           ++L + +   +Q T+ +P+      G I   +     +       + ++     +P    
Sbjct: 266 ARLRVPQHQADQITVGAPVELTTRKGQISG-EVNLIGSVVSNGVVIAEVKLTGELPSDAR 324

Query: 328 TY--IRAKV-TPKQIQHVKKGYTATVR 351
            +  +  ++    QI  +     A +R
Sbjct: 325 PFAPVTGQIFMRTQIDALYVTQLAGLR 351


>gi|330012914|ref|ZP_08307528.1| auxiliary transport protein, membrane fusion protein family protein
           [Klebsiella sp. MS 92-3]
 gi|328533653|gb|EGF60360.1| auxiliary transport protein, membrane fusion protein family protein
           [Klebsiella sp. MS 92-3]
          Length = 380

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 86/296 (29%), Gaps = 48/296 (16%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           ++   +  Q+L       +     F   +  +   +K       S+       + + S  
Sbjct: 75  QSVPVKPNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSLNAALSQAQAELSRA 134

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A     +++    +    + A S   ++ + +        +                  
Sbjct: 135 VAQRDQSRREYARYREGHAQGAFSDQMVDTRLQTWKADEASVSA---------------- 178

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A  +       +   ++    T A  +++L   +   E   + +P  G +      + 
Sbjct: 179 --AQAKVVQARNALDSVVKGKNTTVASLLAQLQKAQFQLENTVVRAPEDGYV-----STV 231

Query: 309 SNYAQQSQ--------PLMKIVPHSKLTYIR--AKVTPKQIQHVKKGYTATVRFPHYADI 358
               +           PLM  VP          A      +Q + KG  A + FP     
Sbjct: 232 G--LRPGTMSTALGMIPLMTFVPVEGAASREYVAAFRQNALQRLHKGEPAELMFPAIPGT 289

Query: 359 REKKFKAIIEKIDPIISQ----------QDNNLQTQEYYEVILKITDLAFSDNNIE 404
               F+  +  + P I +            + L T     V+LK+TD  F++  + 
Sbjct: 290 ---VFRGEVADVLPAIGESQFQGQGKLLTTDALNTHGRALVVLKVTDPRFAEYALP 342



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 51/173 (29%), Gaps = 10/173 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LR 107
             V I S   G ++   V+    + +G  L T +       +D  +  IK        L 
Sbjct: 62  RTVPIVSQVRGRVQSVPVKPNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSLN 121

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
             +   ++ L     + D   + +    E      F  +   T  + +    +SV  +  
Sbjct: 122 AALSQAQAELSRAVAQRDQSRREYARYREGHAQGAFSDQMVDTRLQTWKADEASVSAAQA 181

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLN 217
             +    ++           + L A L   Q  L        E   VS   L 
Sbjct: 182 KVVQARNALDSVVKGKNTTVASLLAQLQKAQFQLENTVVRAPEDGYVSTVGLR 234


>gi|296453923|ref|YP_003661066.1| RND family efflux transporter [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183354|gb|ADH00236.1| efflux transporter, RND family, MFP subunit [Bifidobacterium longum
           subsp. longum JDM301]
          Length = 461

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 65/228 (28%), Gaps = 35/228 (15%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +D+NQ +  +  +   L     +   +   I +  ++   E      + +  L   Q   
Sbjct: 152 SDVNQADLALRAANSNLNAAQQQVNQINATIGQARNQDGEEGQAAADDAAGQLPAAQSGV 211

Query: 274 ADEMSK-------LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ------------ 314
                                 ++T+ +P++GT++   +                     
Sbjct: 212 ESAQVAVQQAQATYDEAVAQANKRTVTAPVSGTVLTMSAV-PGAAIGASSDGSSTSAGAD 270

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--- 371
            +PL +I        +   +    I  V K  +A V F     +      A ++ I    
Sbjct: 271 GKPLCQIA-DLSQMKVNVNINELDITKVAKDQSAKVTFSAVPGLT---LDAKVDTIASTT 326

Query: 372 ---PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 S    +      Y V L I          +L+ G  A V  T
Sbjct: 327 SQLADSSAGGQSGNGGVGYAVRLIIPAPDP-----KLKPGMTASVKIT 369



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 55/141 (39%), Gaps = 21/141 (14%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITW---SILLPIEISVS------------- 45
           +  M +   R     + R+  ++++ ++ +      +I+ P +  VS             
Sbjct: 41  NRLMRERETRKKKRVVHRIIAVAVVAVLIIGFMVVHAIITPSDGGVSPVSTATVERGHFV 100

Query: 46  ----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
               S+G I    N   +     G I + +V+ G+ +  G  L T  + +    ++   +
Sbjct: 101 DQVSSTGSIEPI-NSTVVAPQIDGTIGEVKVQEGATVNAGDVLFTINNDKLDSDVNQADL 159

Query: 102 SIKNLRCHIDTEKSALDFLNN 122
           +++    +++  +  ++ +N 
Sbjct: 160 ALRAANSNLNAAQQQVNQINA 180


>gi|193213144|ref|YP_001999097.1| biotin/lipoyl attachment domain-containing protein [Chlorobaculum
           parvum NCIB 8327]
 gi|193086621|gb|ACF11897.1| biotin/lipoyl attachment domain-containing protein [Chlorobaculum
           parvum NCIB 8327]
          Length = 319

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 74/215 (34%), Gaps = 32/215 (14%)

Query: 221 RIVYKSTLELRENIHEQKNMLRH--------INELYDEANLEFANYLK--EISRDLEQNQ 270
           R    +  ++R+ +     +           ++   D+  ++  +++K  ++   +   +
Sbjct: 31  REYRPAIGDIRQMVSTTATVKPQNRLEIKSPVSGRIDQILVKEGDFVKKGQVLALISSTE 90

Query: 271 RTF------ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           R            S++    K   Q  ++SPI G ++ +           S  ++ +   
Sbjct: 91  RAALLDAATQKGQSEIDYWNKVYNQTALISPIDGQVIVSDLN-PGQTITTSDAVLVL--- 146

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           S    ++A V    I +V+ G    +    Y +I     + +++ I    +  +N     
Sbjct: 147 SDRLIVQADVDETDIGNVQVGQRTEISLDAYPEI---SVEGVVDHIYYESTLVNN---VN 200

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            YY       D+  +      R+G  A V    K 
Sbjct: 201 IYYV------DILPARVPDVFRSGMSANVDIIVKE 229



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 36 ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           +  I   VS++  +    N +EIKSP SG I +  V+ G  + +G  L      E   L
Sbjct: 36 AIGDIRQMVSTTATVKP-QNRLEIKSPVSGRIDQILVKEGDFVKKGQVLALISSTERAAL 94

Query: 96 ID 97
          +D
Sbjct: 95 LD 96


>gi|169795034|ref|YP_001712827.1| hypothetical protein ABAYE0874 [Acinetobacter baumannii AYE]
 gi|215482582|ref|YP_002324774.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB307-0294]
 gi|332854267|ref|ZP_08435267.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6013150]
 gi|332865644|ref|ZP_08436470.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6013113]
 gi|88758818|emb|CAJ77860.1| Putative RND family drug transporter [Acinetobacter baumannii AYE]
 gi|169147961|emb|CAM85824.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
 gi|213986180|gb|ACJ56479.1| HlyD family secretion family protein [Acinetobacter baumannii
           AB307-0294]
 gi|332728083|gb|EGJ59472.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6013150]
 gi|332735165|gb|EGJ66245.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6013113]
          Length = 373

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +  + +++++G+I    W    P    +   G +  E   V + +     I++  V+ G 
Sbjct: 53  IIAVVVIALLGLIIFGLWKSYQP--KPIELQGRVEAET--VHVSTKVPSRIEEIYVQEGQ 108

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           +I +G PL+     E          ++++      T        N   D L   ++S + 
Sbjct: 109 KISKGQPLVRLVSPEIEAKKQQALATLQSALAFQSTVDRGSQQEN--IDTLYANWQSMKA 166

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q  +     +     ++  G+ S  R  +M   +  +  L+    + + +  +   +S Q
Sbjct: 167 Q-ANLAKTTYQRGENLYRQGVISRQRRDEMLAAQTSAQELSEAAYQ-QYARAKRGSTSQQ 224

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIV 223
           K     +    K AVS+    + E  +
Sbjct: 225 KSTADAQVEIAKAAVSEAQALEAETRL 251


>gi|17549682|ref|NP_523022.1| ABC transporter ATP-binding protein [Ralstonia solanacearum
           GMI1000]
          Length = 417

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/250 (12%), Positives = 78/250 (31%), Gaps = 32/250 (12%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               ++    I+S+     +   +             +    +  L++ Q+     + L+
Sbjct: 70  ELKRQLREAEIASIQAQQALSAAQQIESSTEYQAAARRLLAAQNSLAAAQRRGKEAQMLY 129

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +K  +++ +L+  ++ +     ++     E   +                  LK     L
Sbjct: 130 DKGIIARTELDAGKQEIDTGQSQVDGARDEIATL-----------------RLKRAPAAL 172

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV-----------YNQSFSSSNYAQQS 315
              +    +   +L  L    +  T+LSPI+G ++             +  ++       
Sbjct: 173 RVLELDLENRQLRLEELRAKLKATTLLSPISGVVLYPEPTDGNDPSGRKELNAGAAVTPK 232

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             ++  V  +    I+A V  + I+ V  G    +     +D     F   ++++     
Sbjct: 233 DVILT-VGDTSAFLIKAWVDEEDIRRVAPGQAVRIVLGADSDR---AFAGTVQRVSSQAR 288

Query: 376 QQDNNLQTQE 385
             D   Q   
Sbjct: 289 AADGRGQGSR 298


>gi|313501184|gb|ADR62550.1| Secretion protein HlyD family protein [Pseudomonas putida BIRD-1]
          Length = 319

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 83/302 (27%), Gaps = 24/302 (7%)

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +   + L       E   +    K     ++V      +V R   +     R++   R  
Sbjct: 31  DQLPEGLSMGNGRLEATEVQIASKIPGRLAEVLVDEGDNVTRGQLLARIDTRTMEAQRSQ 90

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            E +    R   ++ Q               +   L Q E ++    L     I ++K  
Sbjct: 91  AEAEVLRARENYAAAQ---------------ASVQLRQSELLLASQELRRVREIFQRKFA 135

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            + + +            +      L   +       +++  L    +  ++ +PI G I
Sbjct: 136 SQQLLDQQQARFDTANAAVVAARAQLAAIKAAIGAAEAQVAQLTSEIDDSSLRAPINGII 195

Query: 301 VYNQSFSSSNYAQQ-SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
              +            + LM I P  +   +   +       +  G  A +      +  
Sbjct: 196 Q-LRLAEPGEVLGAGGRVLMLIDPSDQYMNL--YLPASTSGRLTVGDQARIVLDALPERA 252

Query: 360 EKKFKAIIEKIDPIISQQ--DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                A +        +Q    + + +  + V L+++D          + G P       
Sbjct: 253 LPAKVAFVAAKAQFTPKQVETRDERQKLVFRVKLRLSDPGAVPQA---KPGMPGAGYVRT 309

Query: 418 KN 419
             
Sbjct: 310 AE 311



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/149 (10%), Positives = 43/149 (28%), Gaps = 2/149 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V+ G  + +G  L   +           +  +   R +    ++++    ++ 
Sbjct: 57  GRLAEVLVDEGDNVTRGQLLARIDTRTMEAQRSQAEAEVLRARENYAAAQASVQLRQSEL 116

Query: 125 DVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            +  +      E  Q      +        F+   ++V  +         +I      + 
Sbjct: 117 LLASQELRRVREIFQRKFASQQLLDQQQARFDTANAAVVAARAQLAAIKAAIGAAEAQVA 176

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             +S +         +  +   L E   V
Sbjct: 177 QLTSEIDDSSLRAPINGIIQLRLAEPGEV 205


>gi|198282187|ref|YP_002218508.1| secretion protein HlyD family protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218665929|ref|YP_002424552.1| drug resistance secretion protein, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198246708|gb|ACH82301.1| secretion protein HlyD family protein [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218518142|gb|ACK78728.1| drug resistance secretion protein, putative [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 370

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 73/247 (29%), Gaps = 28/247 (11%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           ++        +K + LRA L+S Q+    ++      A    D       V +   E+  
Sbjct: 116 ALVHEIQASRSKEAALRASLNSAQQKAWRLRASASAGASEDMDAITAADAVRRLQAEIGA 175

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                  ++  +       N                           L +      ++ I
Sbjct: 176 ESAHSAALIAQLGAAGPAGN------------------PAVRAATQALALARLNWTRRII 217

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P+ G +   Q+     +    Q L  +VP  +  ++ A +   ++  V+ G   T+  
Sbjct: 218 RAPVTGIVAQ-QAVQPGQWVSAGQRLFTVVPL-QQIWVTANIKETRLAGVRPGAAVTLHS 275

Query: 353 PHYADIRE-----KKFKAIIEKIDPIISQQDNNLQTQEYY-EVILKITDLAFSDNNIELR 406
             Y +                 +  ++  ++ +    ++   V ++I           LR
Sbjct: 276 DLYGNGVTYHGWVVGLGGGSGAVFAVLPPENASGNWIKFTQRVPVRIAVDPKDLTRHPLR 335

Query: 407 NG--FPA 411
            G    A
Sbjct: 336 PGLTMTA 342



 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 20/189 (10%), Positives = 57/189 (30%), Gaps = 10/189 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E N+  + +  +G +      +  ++  G+PL+          +   +  +   R +  
Sbjct: 56  VEGNLYAVDARTTGTVAAIPAYDTMRVEAGSPLVILRGERAGRKLQQAEAQLAQARQNAL 115

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                +    +K   L  +  S +++         +  S+  +         +       
Sbjct: 116 ALVHEIQASRSKEAALRASLNSAQQKAWRLRASASAGASEDMDA--------ITAADAVR 167

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           R       +  + ++L+  L ++       ++      A++   LN   RI+      + 
Sbjct: 168 RLQAEIGAESAHSAALIAQLGAAGPAGNPAVR--AATQALALARLNWTRRIIRAPVTGIV 225

Query: 232 ENIHEQKNM 240
                Q   
Sbjct: 226 AQQAVQPGQ 234


>gi|168818487|ref|ZP_02830487.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|197250171|ref|YP_002148614.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|200387131|ref|ZP_03213743.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|197213874|gb|ACH51271.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|199604229|gb|EDZ02774.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205344447|gb|EDZ31211.1| secretion protein HlyD family protein [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320088103|emb|CBY97865.1| Inner membrane protein yibH [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 378

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 99/294 (33%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +GI+ +   +N   I +G  L   + +     +D  +  +     +ID  K+ L 
Sbjct: 66  VTPQVTGIVSEVTDKNNQLIKKGDVLFKLDPVRYQARVDRLQADLVTATHNIDNLKAQLS 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +      R+    D+      + +KV  +  S +  + +  L +   +  + 
Sbjct: 126 EAVANTTRVSAE---RDRLYKDYQRYLKGSQAKVNPFSESDIDNARQNYLAQDALVKGSV 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            +     S L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 183 AEQTQIQSQLDSMVNGEQSQVASLRAQLAEAKYNLEQTVVRAPSNGYATQILIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L     T +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDEAEVVFNALPGQIFTGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   +  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGALQS----LTVVPGTDGVLATIELDPNADVDALPDGIYAQV 347


>gi|167031853|ref|YP_001667084.1| RND family efflux transporter MFP subunit [Pseudomonas putida GB-1]
 gi|166858341|gb|ABY96748.1| efflux transporter, RND family, MFP subunit [Pseudomonas putida
           GB-1]
          Length = 387

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 54/140 (38%), Gaps = 5/140 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +L   + VE++    GI+ +  V+ G  + +G  L T +D      +D  +  +
Sbjct: 56  ASAIGSVL-SLHSVEVRPQVEGILTQVLVKEGQWVKEGDLLATLDDRSIRASLDQARAQL 114

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  I      L     +Y +L       ++ L       +   + V     +     
Sbjct: 115 GQSQAQIQVAGVDLK----RYRLLSSDDGVSKQTLDQQQALVNQLQATVKGNQAAIANAE 170

Query: 164 LKMKLTRMRSIYLNRLDLEN 183
           +++  T++RS    R+ + N
Sbjct: 171 VQLSYTQIRSPVTGRVGIRN 190



 Score = 36.1 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 10/131 (7%)

Query: 196 QKDLTMMKNLFEKNA-VSQNDLNQQ--ERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           Q +  + + L ++   V + DL     +R +  S  + R  + + +  ++          
Sbjct: 73  QVEGILTQVLVKEGQWVKEGDLLATLDDRSIRASLDQARAQLGQSQAQIQVAGVDLKRYR 132

Query: 253 LEFA------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +        L +    + Q Q T     + +   E       I SP+ G +   ++ 
Sbjct: 133 LLSSDDGVSKQTLDQQQALVNQLQATVKGNQAAIANAEVQLSYTQIRSPVTGRV-GIRNV 191

Query: 307 SSSNYAQQSQP 317
              N  + S  
Sbjct: 192 DPGNLVRTSDT 202


>gi|170723550|ref|YP_001751238.1| RND family efflux transporter MFP subunit [Pseudomonas putida W619]
 gi|169761553|gb|ACA74869.1| efflux transporter, RND family, MFP subunit [Pseudomonas putida
           W619]
          Length = 387

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 59/158 (37%), Gaps = 4/158 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +L   + VEIK    G++ +  V+ G  + QG  L T +D      +D  +  +
Sbjct: 56  ASAIGSVL-SLHSVEIKPQVEGVLTRVLVKEGQWVKQGDLLATLDDRSIRASLDQARAQL 114

Query: 104 KNLRCHIDTEKSALD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +  I      L     L++   V ++  + ++  +           + + N  +   
Sbjct: 115 GQSQAQIQVAGVDLKRYRLLSSDDGVSKQTLDQQQALVNQLQATVKGNQAAIANAEVQLS 174

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           Y  ++  +T    I         ++S  + L S  Q D
Sbjct: 175 YTQIRSPVTGRVGIRNIDPGNLVRASDTQGLFSVTQID 212



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 10/131 (7%)

Query: 196 QKDLTMMKNLFEKNA-VSQNDLNQQ--ERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           Q +  + + L ++   V Q DL     +R +  S  + R  + + +  ++          
Sbjct: 73  QVEGVLTRVLVKEGQWVKQGDLLATLDDRSIRASLDQARAQLGQSQAQIQVAGVDLKRYR 132

Query: 253 LEFA------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           L  +        L +    + Q Q T     + +   E       I SP+ G +   ++ 
Sbjct: 133 LLSSDDGVSKQTLDQQQALVNQLQATVKGNQAAIANAEVQLSYTQIRSPVTGRV-GIRNI 191

Query: 307 SSSNYAQQSQP 317
              N  + S  
Sbjct: 192 DPGNLVRASDT 202


>gi|221134812|ref|ZP_03561115.1| membrane-fusion protein [Glaciecola sp. HTCC2999]
          Length = 341

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/252 (10%), Positives = 88/252 (34%), Gaps = 16/252 (6%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +   + +L+     L  L+         +     +  ++++   ++  I   S  E+  
Sbjct: 98  RMLSRQSELDAAKKELEKLILEDNARAEDLALDLAEATMNEDKARRKVEITVSSRSEVER 157

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                   +  + +   +  L+     + +++ ++  +   A+  +++  ++ +  + T+
Sbjct: 158 RKQAADFAIMQVRKAQAQQRLDEHAQRRIVNQQVQAAR--IANLQTRVDEIKDSLAKMTV 215

Query: 293 LSPIAGTIVYNQS-----FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            S   G ++  ++      +  +       L++ VP      I+ +V       V  G +
Sbjct: 216 KSTSDGIVILRKNGEGDKPAVGDTVSMGNTLIE-VPSLDNLSIKMEVDESDTNKVSIGQS 274

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             V    + +       +   +     SQ++  +     ++  + + ++ F      +R 
Sbjct: 275 VEVVLNAFPERVFTGTISSKGQAYRNKSQRNQKIV----FDAWITLDEMDFDI----MRP 326

Query: 408 GFPAEVLFTAKN 419
           G  A V   A+ 
Sbjct: 327 GMQASVNIPAQQ 338



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/139 (8%), Positives = 44/139 (31%), Gaps = 2/139 (1%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V     +  G  L+ F+  E    +  ++  +   +  ++      +       +    
Sbjct: 74  LVPENKIVKPGDLLVQFDGQELRTRMLSRQSELDAAKKELEKLILEDNARAEDLALDLAE 133

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYR--SLKMKLTRMRSIYLNRLDLENKSSLL 188
               E++    +    S+ S+V     ++ +    ++    + R     +  + N+    
Sbjct: 134 ATMNEDKARRKVEITVSSRSEVERRKQAADFAIMQVRKAQAQQRLDEHAQRRIVNQQVQA 193

Query: 189 RALLSSHQKDLTMMKNLFE 207
             + +   +   +  +L +
Sbjct: 194 ARIANLQTRVDEIKDSLAK 212


>gi|153001105|ref|YP_001366786.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS185]
 gi|151365723|gb|ABS08723.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS185]
          Length = 360

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 60/187 (32%), Gaps = 22/187 (11%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT--FADEMSKLTILE 284
            L+  E I + K     +++   E N   +        +LE+++         ++L   +
Sbjct: 92  QLQNAEQIAKVKAAQVKVSDNQREFNRISSLVTSRTVAELERDRLQTLIDTTRAELEQAQ 151

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHV 342
            +   ++IL+P  G  +  +  S  +       +  +          +   V  + IQ +
Sbjct: 152 ASLNDRSILAPFNGR-LGLRQISVGSLVSPGTAITTL---DDISKIKLDFSVPERFIQDL 207

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             G     +   + D     FK ++  ID  ++     +           I      +  
Sbjct: 208 APGKKVEAKAVAFPDFT---FKGVVTSIDSRVNPTTRTV-----------IVRAEIPNPE 253

Query: 403 IELRNGF 409
           + L  G 
Sbjct: 254 LRLLPGM 260



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 47/121 (38%), Gaps = 4/121 (3%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +I  + + PI   V + G     ++V  I    + ++   + ++G  + +G  L+  ++ 
Sbjct: 38  VIATAAMAPIRDEVEAIGTNKAAESV-TITPKVTDMVTALKFDDGDIVKKGDLLVQLQNA 96

Query: 91  ETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E    +   +V + + +     I +  ++      + D L+   ++   +L       + 
Sbjct: 97  EQIAKVKAAQVKVSDNQREFNRISSLVTSRTVAELERDRLQTLIDTTRAELEQAQASLND 156

Query: 148 T 148
            
Sbjct: 157 R 157


>gi|74317432|ref|YP_315172.1| secretion protein HlyD [Thiobacillus denitrificans ATCC 25259]
 gi|74056927|gb|AAZ97367.1| Secretion protein HlyD [Thiobacillus denitrificans ATCC 25259]
          Length = 430

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 78/213 (36%), Gaps = 27/213 (12%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSI-------------LLPIEIS-----VSSSGEIL 51
            R+ P + + +    I+ +I +  W +               P+        VS++G + 
Sbjct: 21  ARSTPWTRRLIGAALILLVIAVGAWLLLGLDDDEDAARYKTAPVTRGELVVRVSATGNLQ 80

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
             + V E+ S  SGI+++  V+   ++ +G  L   +  +  D +   + ++      + 
Sbjct: 81  PTNQV-EVGSELSGIVERVLVDENDRVKRGQVLARLDVSKLRDTVTRSRANLAAAEAQVL 139

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ +           +A  +R +Q+ +  G    + S++     +           R 
Sbjct: 140 QARATVAE--------ARATRARYQQVAELSGGKVPSKSEMDTAEANLKRAEANEASARA 191

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +        ++++L +A + S    + + + 
Sbjct: 192 AVVQARATLQSDETNLAKASIRSPIDGVVLARK 224



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 60/217 (27%), Gaps = 21/217 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-- 269
           S+ +L   E  V ++   + E    +    +       +   +      E +    +   
Sbjct: 127 SRANLAAAEAQVLQARATVAEARATRARYQQVAELSGGKVPSKSEMDTAEANLKRAEANE 186

Query: 270 ---QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVP 323
              +       + L   E    + +I SPI G ++  +             +  L  +  
Sbjct: 187 ASARAAVVQARATLQSDETNLAKASIRSPIDGVVLARKV-EPGQTVAASFQAPVLFTLAE 245

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 ++  V    +  V+ G  AT     +           +     +        + 
Sbjct: 246 DLARMELQVDVDEADVGQVEIGQKATFTVDAWPGRLYDAVITRVGYGSQV-------KEG 298

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              Y  +L++      ++++ LR G       T    
Sbjct: 299 VVSYLTVLEVD-----NDDLSLRPGMTGTAEITTLRR 330


>gi|126174763|ref|YP_001050912.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS155]
 gi|217972973|ref|YP_002357724.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS223]
 gi|304409190|ref|ZP_07390811.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS183]
 gi|307303193|ref|ZP_07582948.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           BA175]
 gi|125997968|gb|ABN62043.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS155]
 gi|217498108|gb|ACK46301.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS223]
 gi|304353011|gb|EFM17408.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS183]
 gi|306913553|gb|EFN43975.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           BA175]
          Length = 360

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 60/187 (32%), Gaps = 22/187 (11%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT--FADEMSKLTILE 284
            L+  E I + K     +++   E N   +        +LE+++         ++L   +
Sbjct: 92  QLQNAEQIAKVKAAQVKVSDNQREFNRISSLVTSRTVAELERDRLQTLIDTTRAELEQAQ 151

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHV 342
            +   ++IL+P  G  +  +  S  +       +  +          +   V  + IQ +
Sbjct: 152 ASLNDRSILAPFNGR-LGLRQISVGSLVSPGTAITTL---DDISKIKLDFSVPERFIQDL 207

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             G     +   + D     FK ++  ID  ++     +           I      +  
Sbjct: 208 APGKKVEAKAVAFPDFT---FKGVVTSIDSRVNPTTRTV-----------IVRAEIPNPE 253

Query: 403 IELRNGF 409
           + L  G 
Sbjct: 254 LRLLPGM 260



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 47/121 (38%), Gaps = 4/121 (3%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +I  + + PI   V + G     ++V  I    + ++   + ++G  + +G  L+  ++ 
Sbjct: 38  VIATAAMAPIRDEVEAIGTNKAAESV-TITPKVTDMVIALKFDDGDIVKKGDLLVQLQNA 96

Query: 91  ETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E    +   +V + + +     I +  ++      + D L+   ++   +L       + 
Sbjct: 97  EQIAKVKAAQVKVSDNQREFNRISSLVTSRTVAELERDRLQTLIDTTRAELEQAQASLND 156

Query: 148 T 148
            
Sbjct: 157 R 157


>gi|325570641|ref|ZP_08146367.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Enterococcus casseliflavus ATCC 12755]
 gi|325156487|gb|EGC68667.1| ABC superfamily ATP binding cassette transporter, permease protein
           [Enterococcus casseliflavus ATCC 12755]
          Length = 1140

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/240 (12%), Positives = 85/240 (35%), Gaps = 20/240 (8%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L+ F+D+     ++   ++ +  R  I  E             L    + R ++L+D   
Sbjct: 212 LVRFDDL---SQMESYSMAYQTKRDQISAE---------VEKKLAPLAQGRRQELIDEAQ 259

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                  +    G +++  + +        +     +L  + +  +  + + Q+ L    
Sbjct: 260 PAIDEAKEQIRNGETALQEAQRELDDAQEKLAQAHRELTEQEAAFQTEIQAAQEQLN--- 316

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           +  +K A  +  L + +R++ +S   L +   + K+    +  +  +   E  + ++++ 
Sbjct: 317 SEAQKIAEGKQALAENQRLLDQSEQALLQQEAQVKSAQAQLAPISAQ-KSELQSGIQQVE 375

Query: 264 RDLEQNQRTFADEMS--KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
             L    +      S  +L+  E+  +  T+ + +   +      +          L +I
Sbjct: 376 EQLALAYQGMDQIRSVGQLSAEEQMAQLPTVYAQVTAALAQLNLPTD--VLGPIPDLEEI 433



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 69/199 (34%), Gaps = 10/199 (5%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E   L+D  + ++      + + ++ L  ++ +   L+   +  EEQL        +   
Sbjct: 331 ENQRLLDQSEQALLQQEAQVKSAQAQLAPISAQKSELQSGIQQVEEQL--------ALAY 382

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +  +   S    S + ++ ++ ++Y        + +L   +L        + + +     
Sbjct: 383 QGMDQIRSVGQLSAEEQMAQLPTVYAQVTAALAQLNLPTDVLGPIPDLEEIDETMIATML 442

Query: 211 VSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +  D LN       +   +L   +         +     + N  ++  +    ++L Q 
Sbjct: 443 TAAEDTLNPLIAEGEQQRAQLSGQLAAINEQEVQLQRAQQQVNAGWSQ-VSAGRQELAQA 501

Query: 270 QRTFADEMSKLTILEKTRE 288
           Q       S+L++  +T  
Sbjct: 502 QTQITQGESQLSVARETLA 520



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 67/180 (37%), Gaps = 14/180 (7%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           F     +  +++  +R     D L +  S  S  +      +   ++ KL  +       
Sbjct: 195 FAVIPEEDFKESAYARFLVRFDDLSQMES-YSMAYQTKRDQISAEVEKKLAPLAQGRRQE 253

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           L  E + ++  A       +  + +        +Q +L+  +  + ++  EL E   ++ 
Sbjct: 254 LIDEAQPAIDEAKEQIRNGETALQE--------AQRELDDAQEKLAQAHRELTE---QEA 302

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTF-ADEMSKLTILEKTREQKTILSPIA 297
                I    ++ N E A  + E  + L +NQR     E + L    + +  +  L+PI+
Sbjct: 303 AFQTEIQAAQEQLNSE-AQKIAEGKQALAENQRLLDQSEQALLQQEAQVKSAQAQLAPIS 361


>gi|261819896|ref|YP_003258002.1| peptidase M50 [Pectobacterium wasabiae WPP163]
 gi|261603909|gb|ACX86395.1| peptidase M50 [Pectobacterium wasabiae WPP163]
          Length = 701

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 16/166 (9%)

Query: 6   WKNLKRNHPASLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           W   K  HP +  R  LL +I   I L  W   + I   + +         V  + SP  
Sbjct: 403 WSMRKSIHPIAFLRSALLCLILSFILLYPWGGSIHIPAVLEAE-------KVSTLYSPVP 455

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
             + +  V +G Q+  G  LL    ++    +D+++  I  L+       +  +      
Sbjct: 456 AQVNQLHVTDGQQVDAGDILLELTSVDLDYRLDIERQRIAQLQQQRQRGAARQET----- 510

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                  +  + QL + L +Y    ++     I +    +   L R
Sbjct: 511 ---ASEIQVMDRQLAEALARYRGLAAQRQRLTIRAPQTGVVRDLAR 553



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 43/113 (38%), Gaps = 2/113 (1%)

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           Q+       LEL     + +  +        +   +     +E + +++   R  A+ ++
Sbjct: 467 QQVDAGDILLELTSVDLDYRLDIERQRIAQLQQQRQRGAARQETASEIQVMDRQLAEALA 526

Query: 279 KLTILEKTREQKTILSPIAGTIVYN-QSFSSSNYAQQSQPLMKIV-PHSKLTY 329
           +   L   R++ TI +P  G +    +  ++  +     PL+++V P      
Sbjct: 527 RYRGLAAQRQRLTIRAPQTGVVRDLARDLTTGRWLTADTPLLRVVDPAQGRVV 579


>gi|134094168|ref|YP_001099243.1| putative secretion protein [Herminiimonas arsenicoxydans]
 gi|133738071|emb|CAL61116.1| putative macrolide transporter subunit MacA [Herminiimonas
           arsenicoxydans]
          Length = 481

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 56/134 (41%), Gaps = 3/134 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+++G +   + V ++ +  SG +KK  +E GS + +G  L   +       +D ++  +
Sbjct: 66  VTATGTVQPLEYV-DVGAQVSGQLKKLHIEVGSVVKEGDLLAEIDPTVFRATVDARRAGL 124

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +N +  +   +SAL   + +Y   +    +  +       +      +     I ++   
Sbjct: 125 RNQQATMKERESALALASLQYTRQKNLMAA--DATTAETLQIAEATLRAAKAQIDALQAQ 182

Query: 164 LKMKLTRMRSIYLN 177
           ++   + +R+   N
Sbjct: 183 IEQTQSTLRADEAN 196



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 71/209 (33%), Gaps = 19/209 (9%)

Query: 211 VSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             +  L  Q+  +   +S L L    + ++  L   +    E        L+     ++ 
Sbjct: 119 ARRAGLRNQQATMKERESALALASLQYTRQKNLMAADATTAETLQIAEATLRAAKAQIDA 178

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHS 325
            Q       S L   E       I +P+ GT+V   +         +Q    +++I    
Sbjct: 179 LQAQIEQTQSTLRADEANLNYAKIYAPMTGTVVSLTAR-QGQTLNANQNAPTILRIA-DL 236

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               ++ +V+  +I  + K     V F      + +++   + KI+P  +  +N +    
Sbjct: 237 STMTVQTQVSEAEIGKLSKNM--EVYFTTLG-SQGRRWYGALRKIEPTPTVTNNVVL--- 290

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVL 414
            Y  +  +      +NN  L      +V 
Sbjct: 291 -YNALFDVP-----NNNQALMPNMTTQVF 313


>gi|148657319|ref|YP_001277524.1| multidrug resistance efflux pump-like protein [Roseiflexus sp.
           RS-1]
 gi|148569429|gb|ABQ91574.1| Multidrug resistance efflux pump-like protein [Roseiflexus sp.
           RS-1]
          Length = 502

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 100/345 (28%), Gaps = 21/345 (6%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G      E+   T   +  ++S       +  E++       +   +    E   
Sbjct: 171 EVVQAG---ARLEEARATLEAEKARLSAAKTDARLRMEQAVEALTRAQSAWVVAKNEWDS 227

Query: 136 EQLLDFLGKYHSTCSKVFNYGI-SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            Q            ++        +  ++     +   S+   R+  +       A +S+
Sbjct: 228 VQADGQHPTLGYGLNEAEKRKFYDAFVQAETALRSAESSLEQARIAYDAARQAEAAGVSA 287

Query: 195 HQKDLTMMKNLFEKNAVSQN--DLNQQERIVYKSTLELRENIHEQK-NMLRHINELYDEA 251
             + +   +  +++   S N  +L      V  +   L     E++   +        EA
Sbjct: 288 AGQRVVEAQAAYDRIVRSTNNDELAAARAEVADAQARLERLRGEERAGAIAVAEATLAEA 347

Query: 252 NLEFANYLKE-ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
               A       +  + + +       + L   +   ++ T+ +P  G I          
Sbjct: 348 RANLARLKAGPTAAQIAEAEADVRRATAALQAAQTQLDELTLRAPFGGLIAAVNI-KPGE 406

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           Y     PL+ I            +T   I  V+     T+ F     +   + +  + +I
Sbjct: 407 YVTPGTPLITIGDPGAWQIETTDLTELSIVKVQPDAPVTITFDALPGL---EMQGRVTRI 463

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                +   N Q    Y VI+       + +N  LR    A V  
Sbjct: 464 ----RELGENRQGDITYRVIITP-----AQHNPRLRWNMTASVAI 499



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/261 (11%), Positives = 76/261 (29%), Gaps = 12/261 (4%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  V +   ++   +     +  SG++    V  G  +     LL  +      ++    
Sbjct: 40  DERVVAEARVVPARSAALAMN-SSGVVADVLVSEGDTVQAQQVLLVLDTRRQEAIVAQAA 98

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                    +   K+       + +++    + +  +      + + T   +        
Sbjct: 99  ADKARAEATLARLKAG----PTEEEIVAAEAQVQRAEAQLQQVRGNVTDRDILAAEARLQ 154

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN---LFEKNAVSQNDLN 217
               ++      S     +    +    RA L + +  L+  K    L  + AV      
Sbjct: 155 QARARLAELERASNRPEVVQAGARLEEARATLEAEKARLSAAKTDARLRMEQAVEALTRA 214

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDE----ANLEFANYLKEISRDLEQNQRTF 273
           Q   +V K+  +  +   +   +   +NE        A ++    L+     LEQ +  +
Sbjct: 215 QSAWVVAKNEWDSVQADGQHPTLGYGLNEAEKRKFYDAFVQAETALRSAESSLEQARIAY 274

Query: 274 ADEMSKLTILEKTREQKTILS 294
                          Q+ + +
Sbjct: 275 DAARQAEAAGVSAAGQRVVEA 295


>gi|46203812|ref|ZP_00050950.2| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 291

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/329 (13%), Positives = 97/329 (29%), Gaps = 59/329 (17%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILN-EDNVVEIKSPFSGIIKKFQVENGSQILQG 81
            +++ + G + WSI      +VS  G ++  +   V + +P +G I+    + G  + +G
Sbjct: 15  AALVIVGGCLGWSIFGSYRTTVSGQGLLVPADGAFVSVHAPKAGWIES-YRQRGDTVKKG 73

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L      E    +      +  L        + L+                       
Sbjct: 74  DLLARLSAPEDAARLADVDGRVTQLSLQRTALAARLE----------------------- 110

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                             + +       +  ++       E +   L ALL   ++    
Sbjct: 111 ----------------DHIAKETTAAERKREALQETIELGEARVRELTALLGQREQ---- 150

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              L  K     + + +    ++ +   +     +  ++   +  L   ++ E A + ++
Sbjct: 151 ---LLTKGLTQSDRVIEARERLFAARESISRARTDLLSLDAALLSLRHRSDQELAAFDRQ 207

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           +     + QR+ A     L          TI++   G +  N++          Q LM I
Sbjct: 208 LRD--AEGQRSQAHLSETLA--------TTIVARADGIVTTNEA-GDQALVAAGQKLMVI 256

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
                       V     + VK G    +
Sbjct: 257 EQGGPRLDALLYVPADSGKEVKLGMEVRL 285


>gi|320107335|ref|YP_004182925.1| RND family efflux transporter MFP subunit [Terriglobus saanensis
           SP1PR4]
 gi|319925856|gb|ADV82931.1| efflux transporter, RND family, MFP subunit [Terriglobus saanensis
           SP1PR4]
          Length = 389

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 58/161 (36%), Gaps = 6/161 (3%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           ++ +  ++++  E + E   + R   E      L+ +  +      L        +++ +
Sbjct: 130 QQGLAAASVKRAEQLVEADVIGRAELERRRAEQLQASTEVSSYRTQLR-GLGMTENQIHQ 188

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L    K      I++P  GT++  +  +     Q S P   I   S +  + A V  +  
Sbjct: 189 LETNRKLSADYPIVTPKGGTVLK-REITIGQVVQPSDPAFTIADLSSVWIV-ANVPEEDA 246

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             ++KG   TV+ P        +    +  + PI+      
Sbjct: 247 GTLRKGMEVTVKIPALPQE---EITGRLSFVSPIVDPATRT 284



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 10/126 (7%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
              +  + SP SG I +  V  G  +  GT L      + +D   +  +   + +     
Sbjct: 78  ASRIARVGSPVSGRILRLLVFEGQNVKAGTALAMLHSTDLSD-AQVALIKSGSQQGLAAA 136

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                + L     +     E R  + L    +  S  +++         R L M   ++ 
Sbjct: 137 SVKRAEQLVEADVIGRAELERRRAEQLQASTEVSSYRTQL---------RGLGMTENQIH 187

Query: 173 SIYLNR 178
            +  NR
Sbjct: 188 QLETNR 193


>gi|207724813|ref|YP_002255210.1| transmembrane multidrug efflux system (partial sequence) protein
           [Ralstonia solanacearum MolK2]
 gi|206590038|emb|CAQ36999.1| probable transmembrane multidrug efflux system (partial sequence)
           protein [Ralstonia solanacearum MolK2]
          Length = 1051

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 3/119 (2%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            VE++    G I     ++GS + +G PL T +       +   + ++   +  +    S
Sbjct: 70  RVEVRPLVGGTIVAVHFKDGSIVKKGDPLFTIDPRPYAAEVARTQAALTAAKSRVAYTAS 129

Query: 116 ALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            LD    L     +  + FE +E    +         + +    ++  Y  +   +   
Sbjct: 130 ELDRAQKLVADNAIARREFEEKENAAREAQANLQGAAAALDAARLNLEYTRIVAPVAGR 188



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 29/101 (28%), Gaps = 7/101 (6%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------YLKEISRDLEQNQRTFA 274
           R         +  +   K+ + +     D A    A+        +E      + Q    
Sbjct: 104 RPYAAEVARTQAALTAAKSRVAYTASELDRAQKLVADNAIARREFEEKENAAREAQANLQ 163

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              + L       E   I++P+AG +   +  +  N     
Sbjct: 164 GAAAALDAARLNLEYTRIVAPVAGRVSRAEI-TVGNVVATG 203


>gi|188495435|ref|ZP_03002705.1| multidrug resistance protein MdtN [Escherichia coli 53638]
 gi|188490634|gb|EDU65737.1| multidrug resistance protein MdtN [Escherichia coli 53638]
          Length = 343

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEAPLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   +  +  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEAPLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|315125909|ref|YP_004067912.1| hypothetical protein PSM_A0813 [Pseudoalteromonas sp. SM9913]
 gi|315014423|gb|ADT67761.1| hypothetical protein PSM_A0813 [Pseudoalteromonas sp. SM9913]
          Length = 350

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 93/276 (33%), Gaps = 30/276 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+ F    +   S+      S++   +     R +   +    + +  +     + S Q 
Sbjct: 18  LIIFSVYLYFPASQGEQANYSAMTTQVSAHTVRSQENAIMIEAIGSARANQAIYIKSAQN 77

Query: 198 DLTMMKNLFEKNAVSQND-LNQQERIVYK-STLELRENIHEQKNMLRHINELYDEANLEF 255
           D        + + VS+   L Q +    + +  EL  N+ E+K  L  + EL        
Sbjct: 78  DYVTSIYFEDGDLVSKGQKLVQLQNQQEQFAVKELSINLQEEKRQLARLTEL-------- 129

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           +         LE+         ++L   +    +  I +P +G  +  +  S   Y   S
Sbjct: 130 SRSQATAKSLLEEQLARVDASEAQLESAKTKLNEMAITAPFSGL-LGKREISVGAYINNS 188

Query: 316 QPLMKIVPHSKLTYIRA--KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             +  +     ++ I+   KV  K +  +K G     +   Y D     F   +  I   
Sbjct: 189 TVITTL---DDISIIKVDFKVPEKYLAQLKNGMIVRTQNDAYPDQT---FSGKVTHISSR 242

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           I     +          +++T  +F++ +  LR G 
Sbjct: 243 IDSITRS----------VEVT-ASFANKSGLLRPGM 267



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 46/119 (38%), Gaps = 4/119 (3%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           IKS  +  +     E+G  + +G  L+  ++ +    +    ++++  +  +    + L 
Sbjct: 72  IKSAQNDYVTSIYFEDGDLVSKGQKLVQLQNQQEQFAVKELSINLQEEKRQL----ARLT 127

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            L+      +   E +  ++     +  S  +K+    I++ +  L  K       Y+N
Sbjct: 128 ELSRSQATAKSLLEEQLARVDASEAQLESAKTKLNEMAITAPFSGLLGKREISVGAYIN 186


>gi|190573523|ref|YP_001971368.1| putative multidrug resistance protein A [Stenotrophomonas
           maltophilia K279a]
 gi|190011445|emb|CAQ45063.1| putative multidrug resistance protein A [Stenotrophomonas
           maltophilia K279a]
          Length = 393

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 88/269 (32%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + + R +Y +    +   +  +  L   ++D    K+L    A+S  +
Sbjct: 96  ALQQAEANLAKTVRQTRGLYRSVEGAQADLNARQVTLKRVREDFARRKDLAATGAISNEE 155

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   +  +    +     +++       +      ++ +    N      
Sbjct: 156 LAHARDELAAAEAAVAGSRETVERNRALVDDTVIATQPDVQAAAAQLRQAFLNN------ 209

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        +  I++P+ G +   +S       Q    LM +VP  +  ++ A   
Sbjct: 210 ------------ARAGIVAPVTGYVAR-RSVQVGQRVQPGNALMAVVPT-EQMWVEANFK 255

Query: 336 PKQIQHVKKGYTATVRFPHY-ADIRE-------KKFKAIIEKIDPIISQQDNNLQTQEYY 387
             Q++H++ G    ++   Y  D++                 + P  +   N ++  +  
Sbjct: 256 ETQLRHMRLGQEVELKSDLYAGDVKYKGRIQSLGLGTGSAFSLLPAQNASGNWIKIVQRV 315

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + I     +++ + +     AEV   
Sbjct: 316 PVRIAIDAKQLAEHPLRIGLSMKAEVSLR 344



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/130 (9%), Positives = 42/130 (32%), Gaps = 2/130 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + N V+I    +G +     ++G ++ +G  L+  +  +T   +   + ++        
Sbjct: 53  VQGNQVQITPLVAGTVVAINADDGMRVERGQLLVQLDPSDTAVALQQAEANLAKTVRQTR 112

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLT 169
               +++      +  +   +   E       L    +  ++   +    +  +      
Sbjct: 113 GLYRSVEGAQADLNARQVTLKRVREDFARRKDLAATGAISNEELAHARDELAAAEAAVAG 172

Query: 170 RMRSIYLNRL 179
              ++  NR 
Sbjct: 173 SRETVERNRA 182


>gi|157377214|ref|YP_001475814.1| RND family efflux transporter MFP subunit [Shewanella sediminis
           HAW-EB3]
 gi|157319588|gb|ABV38686.1| efflux transporter, RND family, MFP subunit [Shewanella sediminis
           HAW-EB3]
          Length = 455

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 75/204 (36%), Gaps = 16/204 (7%)

Query: 163 SLKMKLTRMRSIYLNRLDLEN---KSSLLRALLSSHQKDLTMMKNL----FEKNAVSQND 215
            L  +  ++  I + RL  E+   ++     L+    + +T+   L     +++ V   +
Sbjct: 127 ELTAEQQQLAGIEVARLSEESFSLEAVATATLVVDRDRTMTLAPQLDVRIEQRHVVPGQE 186

Query: 216 LNQQER-------IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           + + +         V ++  E      E   + R        +    A    E+ R   +
Sbjct: 187 VEKGQPLLTLGGVAVAQAQAEYINAAAEWSRVKRMSKSAVSASRRLQAQVDAELKRATLE 246

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             +    ++  L    +T     +L+PI G +  + +            LM++       
Sbjct: 247 AMKMTTSQIGALESNPETIGSYQLLAPINGRVQQDLAM-LGQVVTSGTALMQLT-DESHL 304

Query: 329 YIRAKVTPKQIQHVKKGYTATVRF 352
           ++ A+VTPKQ ++V  G  A VR 
Sbjct: 305 WVEAQVTPKQSENVSIGSKALVRV 328



 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/129 (10%), Positives = 45/129 (34%), Gaps = 2/129 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDIE-TTDLIDLKKV 101
             ++  ++ + +     +P   + I++  V  G ++ +G PLLT   +       +    
Sbjct: 152 AVATATLVVDRDRTMTLAPQLDVRIEQRHVVPGQEVEKGQPLLTLGGVAVAQAQAEYINA 211

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           + +  R    ++ +       +  V  +   +  E +     +  +  S     G   + 
Sbjct: 212 AAEWSRVKRMSKSAVSASRRLQAQVDAELKRATLEAMKMTTSQIGALESNPETIGSYQLL 271

Query: 162 RSLKMKLTR 170
             +  ++ +
Sbjct: 272 APINGRVQQ 280


>gi|288927086|ref|ZP_06420975.1| HlyD family secretion protein [Prevotella buccae D17]
 gi|288336138|gb|EFC74530.1| HlyD family secretion protein [Prevotella buccae D17]
          Length = 298

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 77/249 (30%), Gaps = 35/249 (14%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           + +   L+            + D+  + +     L+  +++L     L    AV      
Sbjct: 68  TQLTLQLRQTGAARAVYAAQQPDMAAQLAATGEQLAKARRELQRYSELVADGAVP----- 122

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                  K+  + R  +   +  +  +           A   +       Q         
Sbjct: 123 ------AKTADDARSEVSVLEKRMAALRSTLTVQTATLARQQRTTDTQAAQ--------- 167

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
                L     +  + +P++GT++  +      +    +PL K+   ++  ++RA VT  
Sbjct: 168 -----LRDRLCKCRVKAPLSGTVLE-KYAEPGEFVTVGRPLFKMA-DTQRMFLRAYVTSA 220

Query: 338 QIQHVKKGYTATVRFPH-YADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVIL 391
           Q+  V+ G  A V+    Y D   + +   +  I             ++ +    Y V +
Sbjct: 221 QLSRVRLG--ARVKVVADYGDGHTRSYNGTVAWISQAGEFTPKTILTDDERADLVYAVKI 278

Query: 392 KITDLAFSD 400
            + +     
Sbjct: 279 ALRNDGLVK 287


>gi|149425442|ref|XP_001509110.1| PREDICTED: similar to enterophilin-1 [Ornithorhynchus anatinus]
          Length = 924

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 79/221 (35%), Gaps = 11/221 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E  + +   ++ I++ R  I  + S L   N++    +K+ ++ + +L     K  +  S
Sbjct: 323 EKKEKLQADQMEIQDRRARILQDLSKLQAENSQAQAEQKSLQANQRKLQAENDKAQAEQS 382

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +      +     + +  + + +       + + S+L+A  +  QK+   ++       
Sbjct: 383 HLQAMKNQAQTEQKEFQEKKDK-MQTENAKAQAEQSILQAENNQAQKEQKEIQE------ 435

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE---ISRDLE 267
             +  + Q+   +     E +E   E ++    I +   +A  E +    E      + +
Sbjct: 436 -KKVRVLQELSKLQAENEEFQEWKEEIQDRKVLILKDIGQAQAEQSKLQTENDKARAEQK 494

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           + Q+        L  +   +   ++ +P          ++ 
Sbjct: 495 ELQKKRVHLQEDLDQIRTKQTDFSLKAPQTRGGSGLHLYTV 535


>gi|54293231|ref|YP_125646.1| hypothetical protein lpl0279 [Legionella pneumophila str. Lens]
 gi|53753063|emb|CAH14510.1| hypothetical protein lpl0279 [Legionella pneumophila str. Lens]
          Length = 328

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 13/171 (7%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT--- 272
           L++ E       L +            +++           +  +     +E  +     
Sbjct: 96  LSRLEVEKKAILLRIEAAKQAIAAGKANVDRQKKLYEQGINSRRQYELAQIEYAKYQNDL 155

Query: 273 FADEMSKLTILEKTREQKT--ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               + K+ +  +   QKT  I + +AG I    +   S        L +I+P ++   +
Sbjct: 156 AQANIDKVNVDVRIARQKTQIIKAHVAGIIFKRLTGQESVVVNAGDVLAQILPETESRAV 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPI 373
              V    I  V+    A ++F  +  I+           F   +  IDP 
Sbjct: 216 ELWVDGNDIPFVRLNQKARLQFEGWPAIQFRGWPEIAVGTFGGTVSFIDPT 266



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 61/152 (40%), Gaps = 7/152 (4%)

Query: 36  ILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
              P +     +G+++     +    + SP SG IKK+ V+ G ++  G P++   D + 
Sbjct: 34  SFTPWQQFALGNGKVIAFSPTERQHTVNSPVSGRIKKWYVDEGMRVKPGDPIVDITDNDP 93

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE---SREEQLLDFLGKYHSTC 149
            +L+   +V  K +   I+  K A+       D  +K +E   +   Q      +Y    
Sbjct: 94  -ELLSRLEVEKKAILLRIEAAKQAIAAGKANVDRQKKLYEQGINSRRQYELAQIEYAKYQ 152

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           + +    I  V   +++   + + I  +   +
Sbjct: 153 NDLAQANIDKVNVDVRIARQKTQIIKAHVAGI 184


>gi|153838399|ref|ZP_01991066.1| membrane-fusion protein [Vibrio parahaemolyticus AQ3810]
 gi|149748206|gb|EDM59065.1| membrane-fusion protein [Vibrio parahaemolyticus AQ3810]
          Length = 371

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 56/168 (33%), Gaps = 5/168 (2%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +++  L +Q +++        ++  ++   +  + E    A     +   +        +
Sbjct: 97  INKGQLVKQGQVIANIDKRDLDSQLKRAQAMLRVKEKEFNAAKSLKSRGLQGEVAFATAE 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               D  + L  ++   +   + +P  G IV +      ++     P+  ++   +   I
Sbjct: 157 AALVDARANLNNVQTALKNTEVKAPFDG-IVDHHFVEVGDFVGVGDPIATVI-DLETLVI 214

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK--AIIEKIDPIISQ 376
            A V+ + IQ++K    A VR            +    +  +      
Sbjct: 215 EADVSERHIQYLKDDLQADVR-TINDQHHLGTLRYIGRVSSVSTNTFP 261



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 38/100 (38%), Gaps = 4/100 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    +  G  + QG  +   +       +D +    + +    + E +A   L ++ 
Sbjct: 90  GKIVSLNINKGQLVKQGQVIANID----KRDLDSQLKRAQAMLRVKEKEFNAAKSLKSRG 145

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
              E AF + E  L+D     ++  + + N  + + +  +
Sbjct: 146 LQGEVAFATAEAALVDARANLNNVQTALKNTEVKAPFDGI 185


>gi|121728488|ref|ZP_01681513.1| sensor histidine kinase [Vibrio cholerae V52]
 gi|121629263|gb|EAX61700.1| sensor histidine kinase [Vibrio cholerae V52]
          Length = 324

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 63/184 (34%), Gaps = 11/184 (5%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            + V IKS  +GI+ +  V  G  + QG PL+      T   +      +     +++++
Sbjct: 3   SHSVAIKSQINGIVGEIYVREGQHVEQGQPLIKVRPNPTPQALTDASTELMQSEANLESD 62

Query: 114 KSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              L  L    K  ++   ++       D   K      K  N  +     +   +    
Sbjct: 63  LQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQNLELIRSGEASIGQAKLS 122

Query: 172 RSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            ++Y               E   S   +  ++    L  MKN+  K +VS++D  Q    
Sbjct: 123 STLYAPISGTILNIKVEVGEPIISTESSQAATEMIQLADMKNIVFKGSVSEHDAAQLNAG 182

Query: 223 VYKS 226
           +  S
Sbjct: 183 MPAS 186



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 87/225 (38%), Gaps = 35/225 (15%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S   L  ++    N+ R + +    AN    +     +K    +++Q ++
Sbjct: 45  LTDASTELMQSEANLESDLQRLANLERLVKQQIIPANYDDYVRAKADVKAKQAEVQQKRQ 104

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM---------KIV 322
                 S    + + +   T+ +PI+GTI+  +        +  +P++         +++
Sbjct: 105 NLELIRSGEASIGQAKLSSTLYAPISGTILNIK-------VEVGEPIISTESSQAATEMI 157

Query: 323 PHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + +     +  V+      +  G  A++    Y    E+     + K+  I S++ NN
Sbjct: 158 QLADMKNIVFKGSVSEHDAAQLNAGMPASITVAPYP---EQVINGQLTKV-AIQSERLNN 213

Query: 381 LQ---TQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +    + +   ++V +   D+     N+ LR+GF A    T + 
Sbjct: 214 PENKDGKSFDNGFQVEIGQLDI---PENMTLRSGFSASAKITLQR 255


>gi|91224512|ref|ZP_01259774.1| putative lipoprotein component of a efflux transporter [Vibrio
           alginolyticus 12G01]
 gi|91190854|gb|EAS77121.1| putative lipoprotein component of a efflux transporter [Vibrio
           alginolyticus 12G01]
          Length = 389

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 47/110 (42%), Gaps = 3/110 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFL 120
           SG+I+  + ++G  + +G  L+T +D      +   +  +K+ R  ++    E+     L
Sbjct: 66  SGVIETVEFKDGQSVNKGDLLVTLDDRTFKAQVSRLEAQVKSARAALEQAANEQKRAAQL 125

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             +  +  +  E+R+  +     +  +  +++ +  +   +  +   ++ 
Sbjct: 126 VKRKAISAEQAEARDTAVKQRSAELMALRAQLESAKLDLEFTKIYAPISG 175



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 11/107 (10%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  +++ E  V  +   L +  +EQK   + +      A    A         ++Q    
Sbjct: 95  KAQVSRLEAQVKSARAALEQAANEQKRAAQLVKRKAISAEQAEAR-----DTAVKQRSAE 149

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTI------VYNQSFSSSNYAQ 313
                ++L   +   E   I +PI+GTI        N   ++ +   
Sbjct: 150 LMALRAQLESAKLDLEFTKIYAPISGTISRAFITKGNNVNANQSVIS 196


>gi|33863426|ref|NP_894986.1| membrane fusion protein [Prochlorococcus marinus str. MIT 9313]
 gi|33640875|emb|CAE21331.1| possible membrane fusion protein [Prochlorococcus marinus str. MIT
           9313]
          Length = 376

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 102/326 (31%), Gaps = 30/326 (9%)

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +  L+  +   K  +        +       R            +   +     +  +  
Sbjct: 4   LTQLKGALGQRKRLISLSAAVVLITAGGMAWRFSPQQRLGRDLSNYTVETERGTLPGIV- 62

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S   +L   RS+ ++      K+ LL+ L      ++   + L     +   D N +   
Sbjct: 63  SANGELQAKRSVNVSP----KKAGLLKELYVDQGDEVKKGEVLAR---MDSGDYNDRLDE 115

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                 + +     +K      + LY +  +  A+   +  R    ++   A    ++  
Sbjct: 116 AKALERKEQAEYETRKADHERRDNLYQQGAIS-ADDASKYRRLYLTSRANLAAAQERVQQ 174

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--------TYIRAKV 334
                 +  I +P +G I   +      +   +         S            + AKV
Sbjct: 175 RITEGSELLIRAPFSGVITA-RYAEPGAFVTPTTAASATAGASSSSLVELSEGMEVNAKV 233

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               I  ++ G  A+VR   + + R   F A + +I P  ++ +N +     + V L + 
Sbjct: 234 PESDIGRIRIGQNASVRVDAFPEQR---FMARVSEIAPRAAKTENVIS----FAVKLNLI 286

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNT 420
             +      +L  G  A+V F    T
Sbjct: 287 KPSP-----QLLIGMSADVDFQTGKT 307



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 51/122 (41%), Gaps = 3/122 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   VS++GE+  + +V  +    +G++K+  V+ G ++ +G  L   +  +  D +D  
Sbjct: 58  LPGIVSANGELQAKRSV-NVSPKKAGLLKELYVDQGDEVKKGEVLARMDSGDYNDRLDEA 116

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYD--VLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           K   +  +   +T K+  +  +N Y    +     S+  +L        +   +     I
Sbjct: 117 KALERKEQAEYETRKADHERRDNLYQQGAISADDASKYRRLYLTSRANLAAAQERVQQRI 176

Query: 158 SS 159
           + 
Sbjct: 177 TE 178


>gi|311069845|ref|YP_003974768.1| putative ABC transporter [Bacillus atrophaeus 1942]
 gi|310870362|gb|ADP33837.1| putative ABC transporter component [Bacillus atrophaeus 1942]
          Length = 397

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 43/116 (37%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG++  E           G IKK  V+ G ++ +G  L  ++  + +D ++   + I+  
Sbjct: 63  SGKVEPEKQQKVYIDSEKGSIKKTYVKEGDKVKKGDKLFEYDTADNSDEVEQSNLDIEMA 122

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
              I+  +  +     K    +K  +S+ E  LD       T +         +  
Sbjct: 123 NLQINRLEKTIADTEKKLKKADKEEKSQLEDELDQARFDLKTSNLELKQHQKELAN 178



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 80/214 (37%), Gaps = 7/214 (3%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENI 234
             ++ ++++   ++         +     LFE   A + +++ Q    +  + L++    
Sbjct: 71  QQKVYIDSEKGSIKKTYVKEGDKVKKGDKLFEYDTADNSDEVEQSNLDIEMANLQINRLE 130

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               +  + + +   E   +  + L +   DL+ +         +L  L K++    I S
Sbjct: 131 KTIADTEKKLKKADKEEKSQLEDELDQARFDLKTSNLELKQHQKELANLTKSKGSNVITS 190

Query: 295 PIAGTIVY-NQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
              G +   NQ  +      Q S P ++IV  +    ++++V    +  +KKG    +  
Sbjct: 191 KHDGIVQTVNQDIADGASGDQASGPYIQIV-STGAYLVKSQVNELLMDTIKKGSKVKITL 249

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
                  E ++   I  I  + +  + + Q + Y
Sbjct: 250 ---KTGGEGEWTGKITDIGKLPAGTEEDGQAESY 280


>gi|283778647|ref|YP_003369402.1| peptidase, M50 family [Pirellula staleyi DSM 6068]
 gi|283437100|gb|ADB15542.1| peptidase, M50 family [Pirellula staleyi DSM 6068]
          Length = 745

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 58/140 (41%), Gaps = 8/140 (5%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +TL S+ G +GL+     +P+  SV ++ E+   + V    S   G + +  V+ G ++ 
Sbjct: 437 ITLASVAGAVGLLL---FIPLPYSVKAACEVQPRELVQIFAS-TPGTLLEVLVKPGDKVE 492

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            GT L   ++ E    ++++ + +K  R         L  L           E+ E+ L 
Sbjct: 493 AGTVLARLDNPE----MEIELLRLKGQRDEAKNALEGLYRLRFTDSTAVDQIEAAEQVLQ 548

Query: 140 DFLGKYHSTCSKVFNYGISS 159
               +Y+    +     I++
Sbjct: 549 AAERQYNERLEESKRLTITA 568


>gi|262173840|ref|ZP_06041517.1| multidrug resistance efflux pump [Vibrio mimicus MB-451]
 gi|261891198|gb|EEY37185.1| multidrug resistance efflux pump [Vibrio mimicus MB-451]
          Length = 354

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 73/227 (32%), Gaps = 21/227 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  Q +       +  ++ +   +     SL+  L +  ++Y  R       +  +A   
Sbjct: 61  RNNQQVHQGDVLFTIDARKYRIALEQAELSLQSALEKEATLYSQREAALANIARTQATYD 120

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           +  ++   ++ L  +  +S++ L+        +   L+      K +   + E   ++  
Sbjct: 121 NAHREYLRLQKLSTQQVISRSALDNAFAQNQVAHANLKAEQQSLKVIEAQLGEGEGQSTA 180

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               +                   + +   +       +L+P  G +   Q     + A 
Sbjct: 181 VRVAH-------------------NGIEKAQLDLANTRVLAPSDGVVTNLQL-EVGSMAN 220

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            +QP++  +P     ++      K + +V   Y A V F  Y     
Sbjct: 221 ANQPMLTFIPTGS-LWVTGDFREKSVANVDASYHAMVAFDAYPGQVY 266



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 72/209 (34%), Gaps = 11/209 (5%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            +      I+  I L  + I       +++ G +  +  VV++    SG + + Q+ N  
Sbjct: 7   FRLWMRTLIVLFIVLFFYIIFADQHAPITTEGRV--QGYVVQVAPEVSGKVTQVQIRNNQ 64

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSI-----KNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           Q+ QG  L T +  +    ++  ++S+     K    +   E +  +    +        
Sbjct: 65  QVHQGDVLFTIDARKYRIALEQAELSLQSALEKEATLYSQREAALANIARTQATYDNAHR 124

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA- 190
           E    Q L        +            + +LK +   ++ I     + E +S+ +R  
Sbjct: 125 EYLRLQKLSTQQVISRSALDNAFAQNQVAHANLKAEQQSLKVIEAQLGEGEGQSTAVRVA 184

Query: 191 --LLSSHQKDLTMMKNLF-EKNAVSQNDL 216
              +   Q DL   + L      V+   L
Sbjct: 185 HNGIEKAQLDLANTRVLAPSDGVVTNLQL 213


>gi|257142399|ref|ZP_05590661.1| multidrug resistance protein [Burkholderia thailandensis E264]
          Length = 423

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 55/160 (34%), Gaps = 4/160 (2%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  +  +E  +  +     E +  +K+ L +       A  +        S    +    
Sbjct: 171 EETVKAREADLKLAQQAYPEELARRKSSLANAQAALAGAQAQLEAARALGSERPVEQNPA 230

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                ++  +  +   + TI+SP+ GT+   +S           PLM +V   +  ++ A
Sbjct: 231 VQQAAAQFKLAYRNLRRTTIVSPVDGTV-GQRSVQIGQQVGPGVPLMSVV-QLRQVWVEA 288

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                QI+H++ G    +    Y       +   +E +  
Sbjct: 289 NFKEGQIRHMRVGQPVRLESDLYGARVT--YHGRVEGVSA 326



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/146 (8%), Positives = 46/146 (31%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I +   G +    V +  Q+  G  L+  +D + +      +  +      + 
Sbjct: 102 VAGNVVQIAAQIQGTVTDVLVADTQQVKAGQALVKLDDADASAAFAQARAQLAQAVRQVA 161

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++          E   +  ++   + L +  S+ +        +  +    +    
Sbjct: 162 NTRLSMGMYEETVKAREADLKLAQQAYPEELARRKSSLANAQAALAGAQAQLEAARALGS 221

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQK 197
                    ++  ++  +    + ++
Sbjct: 222 ERPVEQNPAVQQAAAQFKLAYRNLRR 247


>gi|188583317|ref|YP_001926762.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           populi BJ001]
 gi|179346815|gb|ACB82227.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           populi BJ001]
          Length = 494

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 16/126 (12%)

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP  G +V     S    A+    L +IV      ++ A VT + +  V +G  ATVR  
Sbjct: 291 SPRDGVVVERNV-SDGMKAKSGDVLFRIV-DHTRVWVLADVTERDLAGVAEGQRATVRVR 348

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            + D     F   + +I P ++ +             L++      + +  LR    A+V
Sbjct: 349 AFPDRT---FTGTVTRIYPHLNMETRT--------ARLRV---ELPNPDGALRPSMYADV 394

Query: 414 LFTAKN 419
                +
Sbjct: 395 EIATGD 400


>gi|146310169|ref|YP_001175243.1| secretion protein HlyD family protein [Enterobacter sp. 638]
 gi|145317045|gb|ABP59192.1| secretion protein HlyD family protein [Enterobacter sp. 638]
          Length = 354

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/178 (10%), Positives = 61/178 (34%), Gaps = 8/178 (4%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           ++     ++      ++  +  I   I +P+    +    +      +      SG +  
Sbjct: 4   EQKFARWVRVSIASFLLMFVYFIVADIWIPLTPDATVMRVVTPVSARI------SGYVAA 57

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V N SQ+ +G  L   +     + ++  +++++     +  ++     +  +  +   
Sbjct: 58  VHVHNNSQVKKGDVLFELDPTPFRNKVEAAQIALEQ--ARLANQQLDAQIVAAQASLKTA 115

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
              +R +++     +  ST   V    +  V  + +     + ++  N  +L  +   
Sbjct: 116 QLTARNDRVTFERYQRLSTMQNVSQADLDKVRTTWQSSEQSVANLEANIHNLRIERGE 173


>gi|90023576|ref|YP_529403.1| H+-transporting two-sector ATPase, delta (OSCP) subunit
           [Saccharophagus degradans 2-40]
 gi|89953176|gb|ABD83191.1| Secretion protein HlyD [Saccharophagus degradans 2-40]
          Length = 491

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 64/177 (36%), Gaps = 19/177 (10%)

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTF---ADEMSKLTILEKTREQKTILSPIAGT 299
            +    +E  L       ++ + +E   +     A E+++LT   K ++     SP  G 
Sbjct: 156 ELVSAQEELILALNTGNTKLVKSVESRLKALHFPAKEIAELTHTRKVQQAVMFPSPQNGV 215

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +          Y      LM I    ++  + A+V  +Q   V+ G   T+   +   + 
Sbjct: 216 VDNLNIR-EGFYVTPGTTLMSIGTLDEVWVV-AEVFERQASLVQVGQPVTM---YLDYLP 270

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            K++   ++ + P +  +           V L+     F + +  L+    AEV+  
Sbjct: 271 NKQWAGKVDYVYPSLDAKTRTA------RVRLR-----FKNADHLLKPNMFAEVIIH 316



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 45/121 (37%), Gaps = 3/121 (2%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQVEN-GSQILQGTPLLTFEDIETTDLI 96
           P+   + + G +  + + +    P  SG I+K  V++ G  + +G PL +    E     
Sbjct: 102 PLHTQIKTVGYVQYDQDNLVHAHPRVSGWIEKLYVKSAGDPVQKGQPLYSLYSPELVSAQ 161

Query: 97  DLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   +++      +  + +S L  L+     + +   +R+ Q         +      N 
Sbjct: 162 EELILALNTGNTKLVKSVESRLKALHFPAKEIAELTHTRKVQQAVMFPSPQNGVVDNLNI 221

Query: 156 G 156
            
Sbjct: 222 R 222


>gi|37677147|ref|NP_937543.1| putative secretion protein [Vibrio vulnificus YJ016]
 gi|37201692|dbj|BAC97513.1| putative secretion protein [Vibrio vulnificus YJ016]
          Length = 404

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 67/212 (31%), Gaps = 21/212 (9%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             S  ++ +   +     SL+  L +  ++Y  R       +  +A   +  ++   ++ 
Sbjct: 122 LFSIDARKYRIALEQAKLSLQSALEKEATLYSQREAALANIARAQATYDNAHREYLRLQK 181

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L  +  +S++ L                   +       +     +A  +  N ++    
Sbjct: 182 LSTQQVISRSSL-------------------DNAFAQNQVANANLKAEQQSLNVIEAQLG 222

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
             E          + +   +       +L+P  G +   Q     + A  +QPL+  +P 
Sbjct: 223 QGEGQSTAVRVAQNGIEKAQLDLANTQVLAPSDGVVTNLQL-EVGSMANANQPLLTFIPT 281

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
               ++      K +  V   Y A V F  Y 
Sbjct: 282 GS-LWVTGDFREKSVAKVDDRYHAMVAFDAYP 312



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 73/206 (35%), Gaps = 19/206 (9%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
            I+  I L  + IL      +++ G +  +  VV++    SG + + Q+ N   + QG  
Sbjct: 64  LIVLFIALFFYIILADQHAPITTEGRV--QGYVVQVAPEVSGKVTQVQIHNNQHVQQGDV 121

Query: 84  LLTFEDIETTDLIDLKKVSIKNLR------------CHIDTEKSALDFLNNKYDVLEKAF 131
           L + +  +    ++  K+S+++                 +  ++   + N   + L    
Sbjct: 122 LFSIDARKYRIALEQAKLSLQSALEKEATLYSQREAALANIARAQATYDNAHREYLRLQK 181

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            S ++ +           ++V N  + +  +SL +   ++               + +  
Sbjct: 182 LSTQQVISRSSLDNAFAQNQVANANLKAEQQSLNVIEAQLGQGEGQ----STAVRVAQNG 237

Query: 192 LSSHQKDLTMMKNLF-EKNAVSQNDL 216
           +   Q DL   + L      V+   L
Sbjct: 238 IEKAQLDLANTQVLAPSDGVVTNLQL 263


>gi|157163552|ref|YP_001460870.1| multidrug resistance protein MdtN [Escherichia coli HS]
 gi|293476386|ref|ZP_06664794.1| multidrug resistance protein mdtN [Escherichia coli B088]
 gi|300824658|ref|ZP_07104765.1| efflux pump membrane protein [Escherichia coli MS 119-7]
 gi|300924354|ref|ZP_07140331.1| efflux pump membrane protein [Escherichia coli MS 182-1]
 gi|301330536|ref|ZP_07223147.1| efflux pump membrane protein [Escherichia coli MS 78-1]
 gi|331670951|ref|ZP_08371785.1| multidrug resistance protein MdtN [Escherichia coli TA271]
 gi|331680216|ref|ZP_08380875.1| multidrug resistance protein MdtN [Escherichia coli H591]
 gi|157069232|gb|ABV08487.1| multidrug resistance protein MdtN [Escherichia coli HS]
 gi|291320839|gb|EFE60281.1| multidrug resistance protein mdtN [Escherichia coli B088]
 gi|300419444|gb|EFK02755.1| efflux pump membrane protein [Escherichia coli MS 182-1]
 gi|300522841|gb|EFK43910.1| efflux pump membrane protein [Escherichia coli MS 119-7]
 gi|300843519|gb|EFK71279.1| efflux pump membrane protein [Escherichia coli MS 78-1]
 gi|331061865|gb|EGI33790.1| multidrug resistance protein MdtN [Escherichia coli TA271]
 gi|331071679|gb|EGI43015.1| multidrug resistance protein MdtN [Escherichia coli H591]
          Length = 343

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASTMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|170698070|ref|ZP_02889151.1| ABC antibiotic efflux pump, membrane fusion protein, HlyD subfamily
           [Burkholderia ambifaria IOP40-10]
 gi|170137031|gb|EDT05278.1| ABC antibiotic efflux pump, membrane fusion protein, HlyD subfamily
           [Burkholderia ambifaria IOP40-10]
          Length = 116

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 38/106 (35%), Gaps = 9/106 (8%)

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQDNNLQT-----QEY 386
           V  + I  V+ G    +R+  Y   +  +    + ++    +  Q+  NL       ++ 
Sbjct: 2   VPSRAIGFVRAGARVVLRYEAYPFQKFGQQFGRVTEVSRTALSPQEVANLTGHTNVPEQL 61

Query: 387 YEVILKITDLAFS--DNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           Y V++ +          +  LR G   E         L + ++ P+
Sbjct: 62  YRVVVALDRQDIVAYGKHEALRPGMALEADVLIDRRRLVEWVLEPL 107


>gi|148358435|ref|YP_001249642.1| RND efflux membrane fusion protein [Legionella pneumophila str.
           Corby]
 gi|296105783|ref|YP_003617483.1| RND efflux membrane fusion protein [Legionella pneumophila 2300/99
           Alcoy]
 gi|148280208|gb|ABQ54296.1| RND efflux membrane fusion protein [Legionella pneumophila str.
           Corby]
 gi|295647684|gb|ADG23531.1| RND efflux membrane fusion protein [Legionella pneumophila 2300/99
           Alcoy]
          Length = 328

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 13/171 (7%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT--- 272
           L++ E       L +            +++           +  +     +E  +     
Sbjct: 96  LSRLEVEKKAILLRIEAAKQAIAAGKANVDRQKKLYEQGINSRRQYELAQIEYAKYQNDL 155

Query: 273 FADEMSKLTILEKTREQKT--ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               + K+ +  +   QKT  I + +AG I    +   S        L +I+P ++   +
Sbjct: 156 AQANIDKVNVDVRIARQKTQIIKAHVAGIIFRRLTGQESVVVNAGDVLAQILPETESRAV 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPI 373
              V    I  V+    A ++F  +  I+           F   +  IDP 
Sbjct: 216 ELWVDGNDIPFVRLNQKARLQFEGWPAIQFRGWPEIAVGTFGGTVSFIDPT 266



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 61/160 (38%), Gaps = 13/160 (8%)

Query: 28  IIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
            +    W            +G+++     +    + SP SG IKK+ V+ G ++  G P+
Sbjct: 32  FLSFTPWQQFA------LGNGKVIAFSPTERQHTVNSPVSGRIKKWYVDEGMRVKPGDPI 85

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE---SREEQLLDF 141
           +   D +  +L+   +V  K +   I+  K A+       D  +K +E   +   Q    
Sbjct: 86  VDITDNDP-ELLSRLEVEKKAILLRIEAAKQAIAAGKANVDRQKKLYEQGINSRRQYELA 144

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
             +Y    + +    I  V   +++   + + I  +   +
Sbjct: 145 QIEYAKYQNDLAQANIDKVNVDVRIARQKTQIIKAHVAGI 184


>gi|307256888|ref|ZP_07538666.1| hypothetical protein appser10_8920 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306864622|gb|EFM96527.1| hypothetical protein appser10_8920 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
          Length = 353

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 107/324 (33%), Gaps = 32/324 (9%)

Query: 103 IKNLRCHIDTEKSALDFL----NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           I ++   I+ E+  +  L      +  + E    S+ + L+        +        I+
Sbjct: 33  IASVNGRIEVERLDIASLYAGRVEEIYIQEGQDVSKNQPLVRLSSSQSQSQVNSAQAQIA 92

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +   S+     + R    +      + +  +   +  + +L+  KNL   N +S ++L +
Sbjct: 93  AAEASVNNAQAQKRRATESVSRANAEIAAQQQKANIAKLELSNAKNLHHDNLISSSELER 152

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           ++     S   +      +      I +                   + Q + T     +
Sbjct: 153 RQANYKASLAAVETAKAAKAEAQATITQAQ---------------ATISQAEATVNQAKA 197

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                +   +   I +P+ G I   +     +       ++ ++  +   Y+   +   Q
Sbjct: 198 FAEQADSQNDDMLIRAPLDGRI-EYKIAMLGSVVGIGGKVVSLL-DTSTVYLNVFLPAHQ 255

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKI 393
              V+    A ++      +    F A +  +         S + +  +++  +++ L+I
Sbjct: 256 SNLVRLNDEARIKIDGSDIV----FPAKVVFVASEAQFTPKSVETSEERSKLMFKIKLQI 311

Query: 394 -TDLAFSDNNIELRNGFPAEVLFT 416
            TD+A    N+ L+ G  A     
Sbjct: 312 PTDIAIQHKNL-LKGGMTAMGYVK 334


>gi|258620758|ref|ZP_05715793.1| putative secretion protein [Vibrio mimicus VM573]
 gi|258586956|gb|EEW11670.1| putative secretion protein [Vibrio mimicus VM573]
          Length = 358

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 73/227 (32%), Gaps = 21/227 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  Q +       +  ++ +   +     SL+  L +  ++Y  R       +  +A   
Sbjct: 65  RNNQQVHQGDVLFTIDARKYRIALEQAELSLQSALEKEATLYSQREAALANIARTQATYD 124

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           +  ++   ++ L  +  +S++ L+        +   L+      K +   + E   ++  
Sbjct: 125 NAHREYLRLQKLSTQQVISRSALDNAFAQNQVAHANLKAEQQSLKVIEAQLGEGEGQSTA 184

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               +                   + +   +       +L+P  G +   Q     + A 
Sbjct: 185 VRVAH-------------------NGIEKAQLDLANTRVLAPSDGVVTNLQL-EVGSMAN 224

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            +QP++  +P     ++      K + +V   Y A V F  Y     
Sbjct: 225 ANQPMLTFIPTGS-LWVTGDFREKSVANVDASYHAMVAFDAYPGQVY 270



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 72/209 (34%), Gaps = 11/209 (5%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            +      I+  I L  + I       +++ G +  +  VV++    SG + + Q+ N  
Sbjct: 11  FRLWMRTLIVLFIVLFFYIIFADQHAPITTEGRV--QGYVVQVAPEVSGKVTQVQIRNNQ 68

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSI-----KNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           Q+ QG  L T +  +    ++  ++S+     K    +   E +  +    +        
Sbjct: 69  QVHQGDVLFTIDARKYRIALEQAELSLQSALEKEATLYSQREAALANIARTQATYDNAHR 128

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA- 190
           E    Q L        +            + +LK +   ++ I     + E +S+ +R  
Sbjct: 129 EYLRLQKLSTQQVISRSALDNAFAQNQVAHANLKAEQQSLKVIEAQLGEGEGQSTAVRVA 188

Query: 191 --LLSSHQKDLTMMKNLF-EKNAVSQNDL 216
              +   Q DL   + L      V+   L
Sbjct: 189 HNGIEKAQLDLANTRVLAPSDGVVTNLQL 217


>gi|332665759|ref|YP_004448547.1| hypothetical protein Halhy_3822 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332334573|gb|AEE51674.1| hypothetical protein Halhy_3822 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 330

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 99/317 (31%), Gaps = 96/317 (30%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           II+   V+ G ++  G  L+ F                   R  +D E +      N+++
Sbjct: 50  IIQDVLVKTGDEVQAGDTLMVF------------------YRAELDQETANRLGDINQFN 91

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V + A  S  ++ LD L   H                               +  L    
Sbjct: 92  VEKNAKNSILDKSLDVLKAQH-------------------------------QAKLSELQ 120

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           + +R   + +Q +  + K L E +  +  D  + E+                   +  + 
Sbjct: 121 AQIRIEEAEYQAESGVRKLLGESDTANGIDPLRAEK-------------------IAALR 161

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK----TREQKTILSPIAGTIV 301
               +   E+A  +KE+  +   NQ  F    +K+ +        R++  + +P+ G + 
Sbjct: 162 TQIQQNEQEYAVQIKELKAERSANQSIFDARNAKVQVELDFVKAERQRLVLTAPVDGFVE 221

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ----IQHVKKGYTA------TVR 351
                ++           +IVP  K      K+ P+Q       + +          TV+
Sbjct: 222 SITVGTN-----------EIVPQYKELI---KINPRQPTRIRGFIYESAEISYKLGDTVK 267

Query: 352 FPHYADIREKKFKAIIE 368
              Y+    +    II 
Sbjct: 268 LSSYSRRNVRGNGVIIG 284


>gi|329888320|ref|ZP_08266918.1| hlyD family secretion family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328846876|gb|EGF96438.1| hlyD family secretion family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 382

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 88/290 (30%), Gaps = 29/290 (10%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     + +    +     ++     L        S        + + +  RA L   Q 
Sbjct: 108 LFRIDDRVYRQRLEQAKANLAGAQAQLANSAQTGASRQATVGARDAELASARAQLQRAQA 167

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D+  + +L    +VS  + +Q E  +  +   +R+    ++   + +             
Sbjct: 168 DMARVADLAADGSVSLRERDQTEAALQSARAAVRQAEAVREVARQDVTS----------- 216

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
               +    E  +       + + + E       I +P AG +    +     Y      
Sbjct: 217 ----VGVSREGLEAAVEAARAAVRLAEIDLANTIITAPEAGQLGQVGAR-RGQYVTAGSQ 271

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L+ +VP     ++ A    +Q   + +G  ATV      D R       ++ I P    +
Sbjct: 272 LVSLVPP--QFWVIANFKERQAGRMIEGQAATVTVDALGDRR---LNGRVQNISPATGSE 326

Query: 378 ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                    T  + +V     ++I   A  +   +LR G          +
Sbjct: 327 FAVLPAQNATGNFTKVAQRLPVRIVLDAGQEGLAKLRPGMSVVARVDTAS 376



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 37/143 (25%), Gaps = 2/143 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               V  I    SG I +    +   +  G PL   +D      ++  K ++   +  + 
Sbjct: 76  VRGQVTVISPQVSGYIVEVVASDFQSVEAGRPLFRIDDRVYRQRLEQAKANLAGAQAQLA 135

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                           +    S   QL               +  +S   R        +
Sbjct: 136 NSAQTGASRQATVGARDAELASARAQLQRAQADMARVADLAADGSVS--LRERDQTEAAL 193

Query: 172 RSIYLNRLDLENKSSLLRALLSS 194
           +S        E    + R  ++S
Sbjct: 194 QSARAAVRQAEAVREVARQDVTS 216


>gi|326930502|ref|XP_003211385.1| PREDICTED: centriolin-like [Meleagris gallopavo]
          Length = 2479

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 80/245 (32%), Gaps = 17/245 (6%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I++   E       G   LT +   T D+ D   +   ++R    +++  ++ +N +Y  
Sbjct: 677 IQELHKEESQWTYYGDDELTVKMSMTEDIFDSLILDTAHMRAQKASKEQQIEVMNKQYKQ 736

Query: 127 LEKAFESR--------------EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           LE   +                E+QL D     +    +     I  +   L+    + +
Sbjct: 737 LESRLDEMLSRIAKETEEIKDLEQQLTDGQIATNEALKRDLESIIIGLQEYLEGVKHQAK 796

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---E 229
                  +L+     L   L+  + +   +K +       + ++   E  + +       
Sbjct: 797 QANDECKELQKDKESLLQRLADLEDERNSLKTVIVDAENMRKEIAMLEGALQEQREINDS 856

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           LRE   E       +     + + E     +E+ R  + +Q   +   ++L    +  E 
Sbjct: 857 LREGQGEVSAYQAELEAQLRDRDTEANQQKEELERLKQLSQMELSALQAELEKERQALEN 916

Query: 290 KTILS 294
               +
Sbjct: 917 ALTKA 921



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 71/221 (32%), Gaps = 17/221 (7%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           L  +          K+  I+ +       +S LD + ++     +  +  E+QL D    
Sbjct: 709 LILDTAHMRAQKASKEQQIEVMNKQYKQLESRLDEMLSRIAKETEEIKDLEQQLTDGQIA 768

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            +    +     I  +   L+    + +       +L+     L   L+  + +   +K 
Sbjct: 769 TNEALKRDLESIIIGLQEYLEGVKHQAKQANDECKELQKDKESLLQRLADLEDERNSLKT 828

Query: 205 L------------FEKNAVSQND-----LNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           +              + A+ +       L + +  V     EL   + ++        E 
Sbjct: 829 VIVDAENMRKEIAMLEGALQEQREINDSLREGQGEVSAYQAELEAQLRDRDTEANQQKEE 888

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            +         L  +  +LE+ ++   + ++K  + E+  +
Sbjct: 889 LERLKQLSQMELSALQAELEKERQALENALTKAQLAEEKEQ 929



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 66/194 (34%), Gaps = 14/194 (7%)

Query: 110  IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL- 168
            +   ++ L   +      E   ES   +  D + KY+     +F+    +     + +  
Sbjct: 1583 LLKRRAELREADRLLTEAEMELESTRGKTKDTIQKYNHAKQHLFHTETEAEELERRAQEM 1642

Query: 169  --------TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM----KNLFEKNAVSQNDL 216
                     ++RS+  +  DLE +      +L    K ++      ++L +K  +    L
Sbjct: 1643 ATKLVKADQQLRSLQADTQDLEQRKKEQEGILKEINKVVSARDSEFQSLNQKIEMLTGSL 1702

Query: 217  NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             + +  +  +      ++   +     +     E      N +    ++L   ++  +  
Sbjct: 1703 QKLQGDIQVAEGNEEHHLQMLREAENVLQVKKTELE-RLKNQVTAQQQELLFVEQQLSQR 1761

Query: 277  MSKLTILEKTREQK 290
              +L +L+    QK
Sbjct: 1762 KEQLRVLQDCISQK 1775



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 64/172 (37%), Gaps = 12/172 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L    +  I  L+ +++  K      N++   L+K  ES  ++L D   + +S  + +
Sbjct: 771 EALKRDLESIIIGLQEYLEGVKHQAKQANDECKELQKDKESLLQRLADLEDERNSLKTVI 830

Query: 153 FNYG-ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS-----------SHQKDLT 200
            +   +      L+  L   R I  +  + + + S  +A L              +++L 
Sbjct: 831 VDAENMRKEIAMLEGALQEQREINDSLREGQGEVSAYQAELEAQLRDRDTEANQQKEELE 890

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            +K L +    +     ++ER   ++ L   +   E++     +   + +  
Sbjct: 891 RLKQLSQMELSALQAELEKERQALENALTKAQLAEEKEQENYKLLSQFIQLQ 942



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 76/218 (34%), Gaps = 14/218 (6%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  +  +  + ++  +V++   +  ++  +        + D  E+  +   ++    + +
Sbjct: 1870 LKLQHDQKVNELEKTQVAVLEEKLKLENIQRLFQCQQGEVDWQEQLLQKDRQENEHLVSQ 1929

Query: 145  YHSTCSKVF-----NYGISSVYRSLKMKLTRMR--------SIYLNRLDLENKSSLLRAL 191
              +  + +         +    RSL+ KL++ R        SI     + E     ++ L
Sbjct: 1930 MRTLQNNIESLSKEKQKLEEDCRSLEKKLSQTRRDLTATEDSIGAALSNAEKTELDIKNL 1989

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                       K+L  + AV   DL +++  +     EL E   + +   +++ +   + 
Sbjct: 1990 QQEVDVLSKQKKSLHGEIAVVHKDLQEKKNELEMLKGELSEARQQLQLAEQNLKD-NTKH 2048

Query: 252  NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              E       +  D+ +  R   D   +    E   +Q
Sbjct: 2049 QEELLKEQATLKEDILKCVRKCKDCQERQKKRENHLQQ 2086


>gi|217979077|ref|YP_002363224.1| secretion protein HlyD family protein [Methylocella silvestris BL2]
 gi|217504453|gb|ACK51862.1| secretion protein HlyD family protein [Methylocella silvestris BL2]
          Length = 365

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 79/268 (29%), Gaps = 14/268 (5%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           I  +     M         ++  DLE       A +   Q  L   +   E+        
Sbjct: 97  IERLVDEGDMVTAGQVVARMDTRDLEASLKKAEAQVQLEQHALDESRANVEQQ------- 149

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + + ++ +   +    +  + N    + +   +     +  L   +  + Q +R     
Sbjct: 150 -KTQLLLAQQQFDRTAALVNRGNATYELLDQRRQTLSGASFALSAANARVAQAERALDAA 208

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
              + + +      T++SP  G I Y +  +          +  ++  S   Y+   +  
Sbjct: 209 THDVELYKVNIADNTLVSPTVGRIQY-RVANVGEVLPAGGKVFTLLDISD-VYMDVYLPT 266

Query: 337 KQIQHVKKGYTATVRFPHYADIREKK---FKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
                 + G  A +    Y +        F A   +  P   + ++  +   +  V +++
Sbjct: 267 AYAGRARVGSEARIVLDAYPNFIVPAHVSFIATQAQFTPKAVETESEREKLMF-RVKVRV 325

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                  +  E+R G P           
Sbjct: 326 DPALLLAHPAEVRTGLPGRAYVRVDPKV 353



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 70/184 (38%), Gaps = 18/184 (9%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPI-------EISVSSSGEILNEDNVVEIKSPFSGIIK 68
              R  ++ ++   G+I       +          VS +G I  E+  ++I + F+G + 
Sbjct: 40  PRWRTFVIFVLLAAGMIGGGAYWWLRRQPGLPAGIVSGNGRIEAEE--IDIDAKFAGRLI 97

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G  +  G  +   +  +    +   +  ++  +  +D  ++ ++    +  + +
Sbjct: 98  ERLVDEGDMVTAGQVVARMDTRDLEASLKKAEAQVQLEQHALDESRANVEQQKTQLLLAQ 157

Query: 129 KAFESREE---------QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           + F+             +LLD   +  S  S   +   + V ++ +        + L ++
Sbjct: 158 QQFDRTAALVNRGNATYELLDQRRQTLSGASFALSAANARVAQAERALDAATHDVELYKV 217

Query: 180 DLEN 183
           ++ +
Sbjct: 218 NIAD 221


>gi|254244516|ref|ZP_04937838.1| hypothetical protein PA2G_05377 [Pseudomonas aeruginosa 2192]
 gi|126197894|gb|EAZ61957.1| hypothetical protein PA2G_05377 [Pseudomonas aeruginosa 2192]
          Length = 425

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 52/390 (13%), Positives = 113/390 (28%), Gaps = 90/390 (23%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P+   +   G +     VV + +PF+G ++   VE G ++ +G  LL  +  E    + 
Sbjct: 50  APLVHQIGLVGRLEP-GRVVTLAAPFAGNVEALLVEPGQRVAEGQELLRMDTREIAVQVR 108

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   R  +   +                                           
Sbjct: 109 EAQSALLKARRTLQDLRDW----------------------------------------- 127

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                 +      +RS  L +   E K    R L          + +L ++ +  + DL 
Sbjct: 128 -ERGEDMARVRRALRSAQLAQSSTERKLRETRELFQRGIVPRNELDDLEQQASQQRMDLE 186

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
              R V  +  + +    +   M                        DL      +    
Sbjct: 187 AARREVESTRAKGQGENRQIAEM------------------------DLANASVKYETLQ 222

Query: 278 SKLTILEKTREQKTILSPIAGTIVYN----------QSFSSSNYAQQSQPLMKIVPHSKL 327
           ++L         +T+ +P AG +V            +   + +   Q Q L  +    + 
Sbjct: 223 AQLDG-------RTVRAPFAGIVVAAPGLAGEQGSREPVQAGSKLGQGQALFGLA-SVER 274

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + AKV+   I  +++G    +    +          +I  +            + ++ 
Sbjct: 275 LKVSAKVSELDINQLREGQAVEISGDGFEGTT---LAGVIAALGGQALPGMAQGGSPQF- 330

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           EV + +  L       ++R G  A++  T 
Sbjct: 331 EVTVSVAPLDPRQLQ-KIRLGMSAKLTVTT 359


>gi|74314170|ref|YP_312589.1| hypothetical protein SSON_3812 [Shigella sonnei Ss046]
 gi|73857647|gb|AAZ90354.1| putative membrane protein [Shigella sonnei Ss046]
          Length = 387

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 75  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 134

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 135 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 194

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 195 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 251

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 252 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 307

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 308 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 356


>gi|32035334|ref|ZP_00135330.1| COG0845: Membrane-fusion protein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208313|ref|YP_001053538.1| hypothetical protein APL_0837 [Actinobacillus pleuropneumoniae L20]
 gi|303251305|ref|ZP_07337483.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307252462|ref|ZP_07534358.1| hypothetical protein appser6_9790 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307254669|ref|ZP_07536497.1| hypothetical protein appser9_9090 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307259114|ref|ZP_07540844.1| hypothetical protein appser11_9120 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307261322|ref|ZP_07542997.1| hypothetical protein appser12_8880 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|126097105|gb|ABN73933.1| hypothetical protein APL_0837 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|302649847|gb|EFL80025.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306860054|gb|EFM92071.1| hypothetical protein appser6_9790 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306862342|gb|EFM94308.1| hypothetical protein appser9_9090 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866781|gb|EFM98639.1| hypothetical protein appser11_9120 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306869053|gb|EFN00855.1| hypothetical protein appser12_8880 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 353

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 107/324 (33%), Gaps = 32/324 (9%)

Query: 103 IKNLRCHIDTEKSALDFL----NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           I ++   I+ E+  +  L      +  + E    S+ + L+        +        I+
Sbjct: 33  IASVNGRIEVERLDIASLYAGRVEEIYIQEGQDVSKNQPLVRLSSSQSQSQVNSAQAQIA 92

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +   S+     + R    +      + +  +   +  + +L+  KNL   N +S ++L +
Sbjct: 93  AAEASVNNAQAQKRRATESVSRANAEIAAQQQKANIAKLELSNAKNLHHDNLISSSELER 152

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           ++     S   +      +      I +                   + Q + T     +
Sbjct: 153 RQANYKASLAAVETAKAAKAEAQATITQAQ---------------ATISQAEATVNQAKA 197

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                +   +   I +P+ G I   +     +       ++ ++  +   Y+   +   Q
Sbjct: 198 FAEQADSQNDDMLIRAPLDGRI-EYKIAMLGSVVGIGGKVVSLL-DTSTVYLNVFLPAHQ 255

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKI 393
              V+    A ++      +    F A +  +         S + +  +++  +++ L+I
Sbjct: 256 SNLVRLNDEARIKIDGSDIV----FPAKVVFVASEAQFTPKSVETSEERSKLMFKIKLQI 311

Query: 394 -TDLAFSDNNIELRNGFPAEVLFT 416
            TD+A    N+ L+ G  A     
Sbjct: 312 PTDIAIQHKNL-LKGGMTAMGYVK 334


>gi|170703517|ref|ZP_02894276.1| efflux transporter, RND family, MFP subunit [Burkholderia ambifaria
           IOP40-10]
 gi|170131578|gb|EDT00147.1| efflux transporter, RND family, MFP subunit [Burkholderia ambifaria
           IOP40-10]
          Length = 327

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 72/226 (31%), Gaps = 27/226 (11%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q      +R+   +  + R  + + K       +L    NL  +  ++E    +EQ 
Sbjct: 77  VIDQARYALAQRLAEATLAQRRATLAQAKREYARNLQLG---NLVASEQVEESRTRVEQG 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   AD    L   +   ++ TI+SP+ G  + +++     Y    + ++ +V       
Sbjct: 134 EAAAADAQVSLDTAKLNLQRTTIVSPVDGY-LNDRAPRVGEYVPAGRAVLSVV-DRNSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----- 384
           +       +++ +  G    +             +  ++ I   I  +D           
Sbjct: 192 VDGYFEETKLRGIHIGQPVDIVVMGEPH----PLRGHVQSIVAAIEDRDRTQGANLLPNV 247

Query: 385 ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                     +   V + + ++    ++  +  G  A V       
Sbjct: 248 NPAFSWVRLAQRVPVRVVLDEV---PDDFRMIAGRTATVAVRTNTR 290



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 6/118 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++    SG+I   QV +  ++ +G  L   +         L + ++   R  + 
Sbjct: 43  VRADVIQVAPDVSGLITAVQVADNQEVKRGQVLFVIDQARYALAQRLAEATLAQRRATLA 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             K            L+       EQ+ +   +     +   +  +S     L ++ T
Sbjct: 103 QAKREYAR------NLQLGNLVASEQVEESRTRVEQGEAAAADAQVSLDTAKLNLQRT 154


>gi|315186564|gb|EFU20323.1| secretion protein HlyD family protein [Spirochaeta thermophila DSM
           6578]
          Length = 285

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 84/288 (29%), Gaps = 37/288 (12%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +L      R   L    G        +     +++   +     ++  +     +LE + 
Sbjct: 32  LLSSPVAERLVALEVQEGDEVEEDQILARLDHTALDLKITALEAQLEQLVYQDEELEARI 91

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                +    +      K L E  AVS   +++    +     EL      +K +     
Sbjct: 92  RQAAEMRDYLRTTYERNKTLLEAQAVSPQTVDELASRLSNQEAELAALQARKKALHAQRK 151

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L  E                             L  LE  R +  I +P AG +     
Sbjct: 152 ALQAE-----------------------------LEGLELQRTRTLIAAPAAGIVEEV-F 181

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           +          P+++ V      Y    V  + +  ++ G    VR     +        
Sbjct: 182 YDVGEMVPSFSPVVE-VADLAHVYTTVYVEERTLARIQPGQEVRVR-TVLDERT-----G 234

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            + K+          ++T E  E ++    +   ++++ ++ G P EV
Sbjct: 235 TVVKLPTKAEFSPKEVRTPETREALVYGVKVLIPNDDLVVKIGMPVEV 282



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 51/144 (35%), Gaps = 2/144 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           + E     + SP +  +   +V+ G ++ +   L   +       I   +  ++ L    
Sbjct: 25  IVEGTQYLLSSPVAERLVALEVQEGDEVEEDQILARLDHTALDLKITALEAQLEQLVYQD 84

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +  ++ +       D L   +E R + LL+       T  +     +S+    L     R
Sbjct: 85  EELEARIRQAAEMRDYLRTTYE-RNKTLLEAQAVSPQTVDE-LASRLSNQEAELAALQAR 142

Query: 171 MRSIYLNRLDLENKSSLLRALLSS 194
            ++++  R  L+ +   L    + 
Sbjct: 143 KKALHAQRKALQAELEGLELQRTR 166


>gi|311106698|ref|YP_003979551.1| hemolysin D [Achromobacter xylosoxidans A8]
 gi|310761387|gb|ADP16836.1| HlyD family secretion protein [Achromobacter xylosoxidans A8]
          Length = 304

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 71/221 (32%), Gaps = 24/221 (10%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + D  + +    ++   +R     +   +R          L  A  L++    L+Q +  
Sbjct: 81  EIDRARFQLAFDQAQASVRSAQVARDQAVRDAKRNRSLGQLVAAEALEQSQTKLQQTEAA 140

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A    +L       ++  +L+   G +      +  +YA   + +M +V  S   Y+  
Sbjct: 141 LAQAEVQLNTARLNLDRSRVLAVNDGRVTNLDLRA-GSYATAGRGVMALV-DSGSFYVEG 198

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-------- 384
                ++  + +G   TV             +  +E I   I+ +D +            
Sbjct: 199 YFEETKLPGIHEGDPVTVTL----MGDSHHIRGHVESIAMGIADRDRSTGANLLPNVNPT 254

Query: 385 -------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                  +   V +KI D+      + L  G  A V   + 
Sbjct: 255 FNWVRLAQRIPVRVKIDDV---PEGVRLVAGQTATVSVDSG 292



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 47/128 (36%), Gaps = 6/128 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            +  VV++    SG++    V +   +  G  L   +        D  + S+++    + 
Sbjct: 47  VKAYVVQVAPDVSGLVTSVPVHDNQDVKAGDVLFEIDRARFQLAFDQAQASVRS--AQVA 104

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +++  D   N+      A E+ E+       K   T + +    +      L +  +R+
Sbjct: 105 RDQAVRDAKRNRSLGQLVAAEALEQS----QTKLQQTEAALAQAEVQLNTARLNLDRSRV 160

Query: 172 RSIYLNRL 179
            ++   R+
Sbjct: 161 LAVNDGRV 168


>gi|260549319|ref|ZP_05823539.1| HlyD family secretion family protein [Acinetobacter sp. RUH2624]
 gi|260407725|gb|EEX01198.1| HlyD family secretion family protein [Acinetobacter sp. RUH2624]
          Length = 372

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 74/207 (35%), Gaps = 8/207 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +  +  ++++G+I    W    P    +   G +  E   V  K P    I++  V+ G 
Sbjct: 52  IIAVVTIALLGLIIFGLWKSYQP--KPIELQGRVEAETIHVSTKVPS--RIEEIYVQEGQ 107

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++ +G PL+     E          ++++      T        N   D L   ++S + 
Sbjct: 108 KVSKGQPLVRLVSPEIEAKKQQALATLQSALAFQSTVDRGSQQEN--IDTLYANWQSMKA 165

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q  +     +     ++  G+ S  R  +M   +  +  L+    +  +   R   S  +
Sbjct: 166 Q-ANLAKTTYQRGENLYRQGVISRQRRDEMLAAQTSAQELSEAAYQQYARAKRGSTSQQK 224

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIV 223
                  ++  K AVS+    + E  +
Sbjct: 225 STADAQVDIA-KAAVSEAQALEAETRL 250


>gi|262045061|ref|ZP_06018102.1| HlyD family secretion protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259037576|gb|EEW38806.1| HlyD family secretion protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 355

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 79/217 (36%), Gaps = 24/217 (11%)

Query: 17  LKRMTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
             R   +SI   +G+  W I+     P+    +    +    + V      SG +    V
Sbjct: 8   FARWVRVSIAAFLGIFAWFIVADIWIPLTPDSTVMRVVTPVSSRV------SGYVSHVYV 61

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            N SQ+ +G  L   +     + ++  +++++     +  ++        + ++    + 
Sbjct: 62  HNNSQVKKGDLLYELDPTPFINKVEAAQIALEQ--AKLSNQQLDAQIAAARANLRTAQYT 119

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSV-------YRSLKMKLTRMRSIYLNRLDLENKS 185
           +R +++     +  ST   V    +  V        +S+     +++++ + R + ++K 
Sbjct: 120 ARNDKVTLDRYQRLSTMQNVSQSDLDKVRTTWQTSEQSVSALNAQIQNLLIQRGERDDKR 179

Query: 186 ----SLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLN 217
                  R  L   Q +L   K   E    VS   LN
Sbjct: 180 NVTLQKYRNALEEAQLNLAWTKVRAETDGMVSNLQLN 216



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 53/179 (29%), Gaps = 19/179 (10%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   + +   +L+      + +              +    + +  L   + L     VS
Sbjct: 81  FINKVEAAQIALEQAKLSNQQLDAQIAAARANLRTAQYTARNDKVTLDRYQRLSTMQNVS 140

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q+DL++       S   +     + +N+L    E  D+ N+    Y       LE+ Q  
Sbjct: 141 QSDLDKVRTTWQTSEQSVSALNAQIQNLLIQRGERDDKRNVTLQKYRN----ALEEAQLN 196

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
            A                 + +   G +   Q      Y   +  ++ +V ++      
Sbjct: 197 LA--------------WTKVRAETDGMVSNLQLN-PGIYTTAATAVLALVNNNTDIVAD 240


>gi|253577003|ref|ZP_04854326.1| efflux transporter [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251843613|gb|EES71638.1| efflux transporter [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 508

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 83/231 (35%), Gaps = 21/231 (9%)

Query: 196 QKDLTMMKNLFEKNAV---SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           + +  + + L +   V    Q  L  +      +  E + ++  QK  L  +   +    
Sbjct: 115 KDEGKVSEVLVKTGDVVEEGQVLLTFEGTDNTDNIKEQQSSLEMQKLDLVDLQNQFKRQV 174

Query: 253 LEFANYL--KEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSS 309
            E A+        + + + +   ++  +++  L++       + SPI GT+      ++ 
Sbjct: 175 QEGADEQTLNATKKSIAKQELNISNTEAEIAKLQEAMVPPDPLTSPIDGTVTAVNI-TAG 233

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
             A+    L  I    +   ++ +V    I  V KG  A V+   + D     F+ ++  
Sbjct: 234 EQAKSGSELFVIN-DYQKLSVKIQVDELDIPSVTKGMKANVQVDAFPDQT---FEGVVS- 288

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               I+ +         ++V + +      +N+  +R G  AE     +  
Sbjct: 289 ---DIANEGVASGGVSLFDVTIAL------NNSEGVRVGMSAEATIITEEK 330



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 52/121 (42%), Gaps = 2/121 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I +SVS SG I        +++   G + +  V+ G  + +G  LLTFE  + TD I  +
Sbjct: 94  ITVSVSGSGTI-VSTESESVRTKDEGKVSEVLVKTGDVVEEGQVLLTFEGTDNTDNIKEQ 152

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S++  +  +   ++       +    E+   + ++ +        +T +++     + 
Sbjct: 153 QSSLEMQKLDLVDLQNQFKR-QVQEGADEQTLNATKKSIAKQELNISNTEAEIAKLQEAM 211

Query: 160 V 160
           V
Sbjct: 212 V 212


>gi|184159182|ref|YP_001847521.1| membrane-fusion protein [Acinetobacter baumannii ACICU]
 gi|213158303|ref|YP_002320354.1| putative RND family drug transporter [Acinetobacter baumannii
           AB0057]
 gi|301346975|ref|ZP_07227716.1| putative RND family drug transporter [Acinetobacter baumannii
           AB056]
 gi|301597100|ref|ZP_07242108.1| putative RND family drug transporter [Acinetobacter baumannii
           AB059]
 gi|332876011|ref|ZP_08443797.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6014059]
 gi|183210776|gb|ACC58174.1| Membrane-fusion protein [Acinetobacter baumannii ACICU]
 gi|213057463|gb|ACJ42365.1| putative RND family drug transporter [Acinetobacter baumannii
           AB0057]
 gi|322509096|gb|ADX04550.1| membrane-fusion protein [Acinetobacter baumannii 1656-2]
 gi|323519126|gb|ADX93507.1| membrane-fusion protein [Acinetobacter baumannii TCDC-AB0715]
 gi|332735877|gb|EGJ66918.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6014059]
          Length = 373

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 77/207 (37%), Gaps = 8/207 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +  + +++++G+I    W    P    +   G +  E   V + +     I++  V+ G 
Sbjct: 53  IIAVVVIALLGLIIFGLWKSYQP--KPIELQGRVEAET--VHVSTKVPSRIEEIYVQEGQ 108

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           +I +G PL+     E          ++++      T        N   D L   ++S + 
Sbjct: 109 KISKGQPLVRLVSPEIEAKKQQALATLQSALAFQSTVDRGSQQEN--IDTLYANWQSMKA 166

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q  +     +     ++  G+ S  R  +M   +  +  L+    + + +  +   +S Q
Sbjct: 167 Q-ANLAKTTYQRGENLYRQGVISRQRRDEMLAAQTSAQELSEAAYQ-QYARAKRGSTSQQ 224

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIV 223
           K     +    K AVS+    + E  +
Sbjct: 225 KSTADAQVEIAKAAVSEAQALEAETRL 251


>gi|157164385|ref|YP_001466844.1| membrane fusion protein (MFP) family auxiliary transport protein
           [Campylobacter concisus 13826]
 gi|112801283|gb|EAT98627.1| MacA [Campylobacter concisus 13826]
          Length = 397

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 58/134 (43%), Gaps = 3/134 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V ++GEI     ++++ +  SG IKK  V+ G Q+ +G  + + +     + ID K+  +
Sbjct: 48  VDATGEI-FATELIDVGAQVSGQIKKLYVKLGDQVKKGDMIASIDSSTQQNSIDNKEAQL 106

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +++ K AL+    ++D     F        +F    ++  +   +  I  +   
Sbjct: 107 AIYKAQLESAKVALNIAKTQFDRENALFSKNATSKQEFESAKNTYSAN--SAKIKELEAQ 164

Query: 164 LKMKLTRMRSIYLN 177
           +K     + +  +N
Sbjct: 165 IKQTNIELSTAKIN 178



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 83/232 (35%), Gaps = 16/232 (6%)

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            K      ++F   +  V   +  ++   + +Y+   D   K  ++ ++ SS Q++    
Sbjct: 45  SKKVDATGEIFATELIDVGAQVSGQI---KKLYVKLGDQVKKGDMIASIDSSTQQNSIDN 101

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           K        +Q  + + +    K  L + +   +++N L   N    +      N     
Sbjct: 102 KE-------AQLAIYKAQLESAKVALNIAKTQFDRENALFSKNATSKQEFESAKNTYSAN 154

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           S  +++ +        +L+  +       I +P  GT+V  Q          +Q    IV
Sbjct: 155 SAKIKELEAQIKQTNIELSTAKINLGYTKITAPRDGTVVSVQV-EEGQTVNANQTTPTIV 213

Query: 323 PHSKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             + L++++ K  +    I  +K G               KKF+  +  IDP
Sbjct: 214 NIADLSHVKMKMQIAEGDITKIKVGTPVEYSILS---EPTKKFQTTVSSIDP 262


>gi|37526536|ref|NP_929880.1| hypothetical protein plu2645 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36785967|emb|CAE15019.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 425

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 102/312 (32%), Gaps = 43/312 (13%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL---- 181
            +   F+    +++   G+       + +   + +   L+  LT +        DL    
Sbjct: 72  TIAAPFDGVIAEVMVTEGQRVKRGQPLLSLDTTQLDIQLRQALTELLKAQKTVQDLVGWE 131

Query: 182 --------ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                       +  +  LS  ++ LT  + LFE+  V + +++  E+ V    L+L   
Sbjct: 132 NSQDVARVRRALTNAQLSLSDTERKLTDTRALFERGIVPRMEVDILEQQVRVQQLDLAAA 191

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             E    L        +                       A+  S+   L+  + Q+ ++
Sbjct: 192 KAELSVALDKGTGENRQI-----------------ADMELANAQSRYQALQIQQAQRELV 234

Query: 294 SPIAGTIVYNQS--------FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           SP  G ++  Q                 Q  PL+ ++   ++  + A++    +  V +G
Sbjct: 235 SPFDGIVIRPQVPESDKGVFIQKGTRVTQGTPLLGVINLEQIQAV-ARIEEADLYQVYEG 293

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
               +    +A +     +  I+ I    S ++        Y++++ I  L        +
Sbjct: 294 MPVEITGDGFAGL---SLRGQIKTIGVQGSSKEMQGAGVT-YDLLVAIDPLTPEQRQ-RI 348

Query: 406 RNGFPAEVLFTA 417
           R    A++    
Sbjct: 349 RLSMSAKLAIVT 360



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 64/168 (38%), Gaps = 4/168 (2%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I +PF G+I +  V  G ++ +G PLL+ +  +    I L++   + L+     +    
Sbjct: 72  TIAAPFDGVIAEVMVTEGQRVKRGQPLLSLDTTQL--DIQLRQALTELLKAQKTVQDLVG 129

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
              +     + +A  + +  L D   K   T +      +  +   +  +  R++ + L 
Sbjct: 130 WENSQDVARVRRALTNAQLSLSDTERKLTDTRALFERGIVPRMEVDILEQQVRVQQLDLA 189

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               E   +L +   +   + +  M+    ++      + Q +R +  
Sbjct: 190 AAKAELSVALDKG--TGENRQIADMELANAQSRYQALQIQQAQRELVS 235


>gi|320322850|gb|EFW78941.1| HlyD family secretion protein [Pseudomonas syringae pv. glycinea
           str. B076]
          Length = 388

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 4/184 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+  G +L     V I+    G++ +  V+ G Q+  G  L T +D      ++  +  +
Sbjct: 55  VTGIGSVL-SLQSVVIRPQVDGVLTRVLVKEGQQVKAGELLETLDDRSIRASLEQARAQL 113

Query: 104 KNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +  +D  +  L     L     +  + F+ ++  +           + +    +   
Sbjct: 114 AQSKAQLDVAQLDLKRYRQLTKDNGISRQTFDQQQALVRQLEATAKGNEASINASQVQLS 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y  ++  +T    I         + S    L S  Q D   ++    +  +        E
Sbjct: 174 YTQIRSPVTGRVGIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAE 233

Query: 221 RIVY 224
           R   
Sbjct: 234 RTSA 237



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 77/252 (30%), Gaps = 36/252 (14%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L++++   Q D  + + L ++       +   E +       +R ++ + +  L     
Sbjct: 63  SLQSVVIRPQVDGVLTRVLVKEG----QQVKAGELLETLDDRSIRASLEQARAQLAQSKA 118

Query: 247 LYDEANLEFANYLK-------------EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             D A L+   Y +             +    + Q + T     + +   +       I 
Sbjct: 119 QLDVAQLDLKRYRQLTKDNGISRQTFDQQQALVRQLEATAKGNEASINASQVQLSYTQIR 178

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ G +   ++    N+ + S       + +I P +    +  ++ P     + +  +A
Sbjct: 179 SPVTGRV-GIRNVDEGNFLRVSDATGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAERTSA 237

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            V+              +  +  ID  +S     ++               F +   +L 
Sbjct: 238 VVKAYQGDGAANGLLLGEGTLSLIDNQVSATTGTIR-----------AKAQFKNPGEQLW 286

Query: 407 NGFPAEVLFTAK 418
            G    V     
Sbjct: 287 PGQLVTVKIQTG 298


>gi|213649901|ref|ZP_03379954.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 256

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/263 (11%), Positives = 73/263 (27%), Gaps = 19/263 (7%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           ++      +          ++      A L S  K     ++L ++ AVS   L+     
Sbjct: 1   AVAAARALLEQRQSEMRAAQSVVKQREAELDSVSKRHVRSRSLSQRGAVSVQQLDDDRAA 60

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +   L     +       I                       Q +   A    +  +
Sbjct: 61  AESARAALETAKAQVSAAKAAIEAARTSIIQ-------------AQTRVEAAQATERRIV 107

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +   +   + +P  G + Y +             ++ +V  S   Y+   +  +Q   +
Sbjct: 108 AD--IDDSELKAPRDGRVQY-RVAEPGEVLSAGGRVLNMVDLSD-VYMTFFLPTEQAGLL 163

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSD 400
           K G  A +      D+R     + +  +     +  + ++ + +  + V  +I       
Sbjct: 164 KIGGDARLVLDAAPDLRIPATISFVASVAQFTPKTVETHDERLKLMFRVKARIPPELLRQ 223

Query: 401 NNIELRNGFPAEVLFTAKNTTLA 423
           +   ++ G P             
Sbjct: 224 HLEYVKTGLPGMAWVRLDERVPW 246


>gi|87302799|ref|ZP_01085610.1| possible ABC transporter component [Synechococcus sp. WH 5701]
 gi|87282682|gb|EAQ74640.1| possible ABC transporter component [Synechococcus sp. WH 5701]
          Length = 304

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 23/243 (9%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIY----LNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           +     S+   +      + R++     L RL+       L A ++       + K L E
Sbjct: 26  ISRSQQSTSSEAAPQTTAQPRTLEAVSALGRLEPAGDIRKLAAPITGIGGSPRITKLLVE 85

Query: 208 KN-AVSQNDLNQ----------QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +   V +  L            Q R++      L + +      +    +L  +A    A
Sbjct: 86  EGQRVQEGQLLATFDTGPPLQAQRRLLQSRIANLSDQVTLLGREISRYRQL-AKAGATPA 144

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             L+     L + +    +   +L   E       + +P +GT++  +S       +   
Sbjct: 145 ADLESRELTLVELKGNLREAQDELVKTEADLVNTELRAPFSGTVLKLRSR-VGE--RPGD 201

Query: 317 P-LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             ++++   S    + A+V    I  ++ G  AT+                + +I P + 
Sbjct: 202 DGILELG-ASDQMEVLAEVYESDINRLQLGQRATI--TSENGGFSGTLNGRVIRISPQVR 258

Query: 376 QQD 378
           Q+D
Sbjct: 259 QRD 261



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 85/243 (34%), Gaps = 18/243 (7%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGI-----IKKFQVENGSQILQGTPLLTFED----IET 92
            +VS+ G +    ++ ++ +P +GI     I K  VE G ++ +G  L TF+        
Sbjct: 49  EAVSALGRLEPAGDIRKLAAPITGIGGSPRITKLLVEEGQRVQEGQLLATFDTGPPLQAQ 108

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L+  +  ++ +    +  E S    L           ESRE  L++  G       ++
Sbjct: 109 RRLLQSRIANLSDQVTLLGREISRYRQLAKAGATPAADLESRELTLVELKGNLREAQDEL 168

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                  V   L+   +       +R+        +  L +S Q     M+ L E   V 
Sbjct: 169 VKTEADLVNTELRAPFSGTVLKLRSRVGERPGDDGILELGASDQ-----MEVLAE---VY 220

Query: 213 QNDLNQQE-RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++D+N+ +       T E           +  I+    + ++   +   +    + + + 
Sbjct: 221 ESDINRLQLGQRATITSENGGFSGTLNGRVIRISPQVRQRDVLSTDPTGDADARIVEVRL 280

Query: 272 TFA 274
              
Sbjct: 281 ALE 283


>gi|262274960|ref|ZP_06052771.1| membrane-fusion protein [Grimontia hollisae CIP 101886]
 gi|262221523|gb|EEY72837.1| membrane-fusion protein [Grimontia hollisae CIP 101886]
          Length = 354

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 72/232 (31%), Gaps = 24/232 (10%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A +S+      +  ++ +  AV + DL      ++    +    I   K +L  + +  
Sbjct: 58  DATISAEASGRVIKVSVRKGAAVKKGDLL-----IFIDKGDREAQIKRAKALL-QVRQKE 111

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A    +    +      Q Q   A+  + +  LE       + +P  G +        
Sbjct: 112 YNAASSLSQKGLQGEVAFSQAQANLAEARATVENLELALSNTAVRAPFDGIVDDMTV-EV 170

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +Y     P+  ++       + A V+ + I+++     A V       +     +  + 
Sbjct: 171 GDYLGVGDPVATLL-DLDPLIVTADVSERHIRNIDASLPAKVLL-----VDGTAKEGRLR 224

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               I S + +               +L   + +  L  G  AEV    +  
Sbjct: 225 YQSSISSPETHTFTI-----------ELEIPNPDQTLPAGISAEVDLALEQK 265



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 5/122 (4%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G    + +   I +  SG + K  V  G+ + +G  L+  +  +    I   K  ++  +
Sbjct: 51  GRTEPDRDA-TISAEASGRVIKVSVRKGAAVKKGDLLIFIDKGDREAQIKRAKALLQVRQ 109

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
              +        L+ K    E AF   +  L +      +    + N  + + +  +   
Sbjct: 110 KEYNA----ASSLSQKGLQGEVAFSQAQANLAEARATVENLELALSNTAVRAPFDGIVDD 165

Query: 168 LT 169
           +T
Sbjct: 166 MT 167


>gi|237807420|ref|YP_002891860.1| hypothetical protein Tola_0645 [Tolumonas auensis DSM 9187]
 gi|237499681|gb|ACQ92274.1| conserved hypothetical protein [Tolumonas auensis DSM 9187]
          Length = 357

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 82/235 (34%), Gaps = 23/235 (9%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +    D +  A   ++ Q         +    V    I  +  ++ +    +        
Sbjct: 73  IQASQDAVISAVNIKQGQPAKQGNILIALDKPVLQAEIKQLENNISLLEKTLTG------ 126

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQK 238
           D   + +LL+  +     DL     L++K    +QN L Q E+    S L++   +   +
Sbjct: 127 DWVKQETLLKQKIDIAAADLKEKSTLYQKYMSFNQNGLLQLEQWANVSQLKMNAELLLLE 186

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           +         D+ +   A YL E+                +L +L+  + +  +++P+ G
Sbjct: 187 SNRNLYALNQDKISGSAAQYLNELKL--------------RLQLLKARQSELQVVAPMDG 232

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
            +            +  +PLM     S+   + A +TP   Q    G  ATV  P
Sbjct: 233 EVKDVLV-QRGMTVRSGEPLMLYAIRSQPVVV-AYLTPSDGQFSGIGQQATVTLP 285



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 66/202 (32%), Gaps = 7/202 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR        + L  II  + +  W  +   ++ V S G +  E   ++I++    +I  
Sbjct: 27  KRIAFRLRWYLILFLIISPVLIFVW-YITKDKVIVESPGLLTTE--PLKIQASQDAVISA 83

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             ++ G    QG  L+  +       I   + +I  L   +  +    + L  +   +  
Sbjct: 84  VNIKQGQPAKQGNILIALDKPVLQAEIKQLENNISLLEKTLTGDWVKQETLLKQKIDIAA 143

Query: 130 AFESREEQL----LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           A    +  L    + F         +  N     +   L +  +      LN+  +   +
Sbjct: 144 ADLKEKSTLYQKYMSFNQNGLLQLEQWANVSQLKMNAELLLLESNRNLYALNQDKISGSA 203

Query: 186 SLLRALLSSHQKDLTMMKNLFE 207
           +     L    + L   ++  +
Sbjct: 204 AQYLNELKLRLQLLKARQSELQ 225


>gi|194466492|ref|ZP_03072479.1| chromosome segregation protein SMC [Lactobacillus reuteri 100-23]
 gi|194453528|gb|EDX42425.1| chromosome segregation protein SMC [Lactobacillus reuteri 100-23]
          Length = 1187

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 68/202 (33%), Gaps = 8/202 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +              S  + L N+  +LE   + ++ Q  D+  +      
Sbjct: 716 DYQQQVQTLQDKFHEQESSCQLISSKHETLTNRVQILETQNKQQDTQHQDYESQVQQN-- 773

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
              N     V + L   + +++ I     +L+N  S     L+  Q+ + + +   ++  
Sbjct: 774 ---NEQADKVNQELTQVVAKIKQILTQIDELQNDESTQARQLAQMQQKIAVAEERLQQYQ 830

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLE 267
               + N+Q R V +S  ++   I E        +           +  +E ++    LE
Sbjct: 831 RQSQEYNRQRREVEESLEKVAIAIAELTTQSASQSTSEQSTQTALKDAKEEQAKAKVQLE 890

Query: 268 QNQRTFADEMSKLTILEKTREQ 289
            N     +   KL+  E    +
Sbjct: 891 DNSVALEELEQKLSQAEAHYNR 912



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 71/211 (33%), Gaps = 6/211 (2%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           ++T +         +   + ++ R  + ++K     L  +    E+   S E+++     
Sbjct: 646 VVTLDGQLINASGAMTGGATRSQRTGLLSQKQMAKQLEEELKKQEQLAASLEQEVAKLQQ 705

Query: 144 KYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              +    V  +   + ++      + +  + I      L N+  +L             
Sbjct: 706 AQKANEQVVADYQQQVQTLQDKFHEQESSCQLISSKHETLTNRVQILETQNKQQDTQHQD 765

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            ++  ++N    + +NQ+   V     ++   I E +N          +   + A     
Sbjct: 766 YESQVQQNNEQADKVNQELTQVVAKIKQILTQIDELQNDESTQARQLAQMQQKIAV---- 821

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               L+Q QR   +   +   +E++ E+  I
Sbjct: 822 AEERLQQYQRQSQEYNRQRREVEESLEKVAI 852



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 64/207 (30%), Gaps = 4/207 (1%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHS 147
            +    I      I  L+    T+   L  +  K  V E+  +   R+ Q  +   +   
Sbjct: 785 TQVVAKIKQILTQIDELQNDESTQARQLAQMQQKIAVAEERLQQYQRQSQEYNRQRREVE 844

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              +     I+ +      + T  +S      D + + +  +  L  +   L  ++    
Sbjct: 845 ESLEKVAIAIAELTTQSASQSTSEQSTQTALKDAKEEQAKAKVQLEDNSVALEELEQKLS 904

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +     N L + +R        L E   + ++M+        E      +  ++    L+
Sbjct: 905 QAEAHYNRLQELQRAALDDRNNLNEERVKYESMVDQALNRLSEQYSMTIDEARQQMSKLD 964

Query: 268 QNQRTFADEMSKLTILEKTREQKTILS 294
           +   T A  +  L        Q  + +
Sbjct: 965 EE--TLATRLKLLKRGLDDLGQVNVGA 989



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 63/206 (30%), Gaps = 3/206 (1%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             +  +T    D     +  L   ++  ++ +     +     +  ++ +++        
Sbjct: 224 VLDRTQTVRHYDEYYEKLTKLGAKLEQAEAMVKDYQGQAGHDRQQLDNLKQKRQQLNATK 283

Query: 146 HSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ-KDLTMM 202
               + + N    I+       +   R       +  L  + + L A L   +       
Sbjct: 284 DRLQAIILNQTEAIAKYENQQSVSSVRREQRENEQRRLTAQQAELNARLKEVKTSQQAND 343

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + L ++ A+  +   + E     S+ E    + +Q   LR+      +      N    +
Sbjct: 344 QQLTKQKALINSQQAEFEAAKKMSSGERIAALKQQVEDLRNQQVSLMQERTTIHNQQSFL 403

Query: 263 SRDLEQNQRTFADEMSKLTILEKTRE 288
           SR+ EQ        + +L   +    
Sbjct: 404 SRNHEQAMSLQRQNVEELDATKNQLA 429


>gi|27379431|ref|NP_770960.1| RND efflux membrane fusion protein [Bradyrhizobium japonicum USDA
           110]
 gi|27352582|dbj|BAC49585.1| bll4320 [Bradyrhizobium japonicum USDA 110]
          Length = 380

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 62/186 (33%), Gaps = 21/186 (11%)

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           I    D+  L+     +        N+R     +++   L     QKT+ +P AG  +  
Sbjct: 127 ITLRRDQGQLKINAVSQATVDSDVVNERNALALVAQQQALMD---QKTLKAPFAGR-LGV 182

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +      Y      ++ +       ++   +  + +  VK G   T R   + D     F
Sbjct: 183 RQVDVGQYLTAGTTIVTLQALD-RLFVDFTLPQQALDQVKVGQEVTARIDAFPDR---SF 238

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           K +++  +  + Q   N+Q               F + + +L  G  A +     + T  
Sbjct: 239 KGVVQAFNSKVDQASRNVQV-----------RAIFDNTDRKLLPGMFARIDVRVGHPT-- 285

Query: 424 QEIIHP 429
             +  P
Sbjct: 286 SYLTLP 291


>gi|238797188|ref|ZP_04640690.1| Multidrug resistance protein mdtN [Yersinia mollaretii ATCC 43969]
 gi|238719035|gb|EEQ10849.1| Multidrug resistance protein mdtN [Yersinia mollaretii ATCC 43969]
          Length = 356

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/346 (11%), Positives = 97/346 (28%), Gaps = 88/346 (25%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I    V +   + QG  L   +                        E+S  D L   
Sbjct: 56  SGRIVAMNVRDNQAVKQGDILFRID------------------------ERSYQDNLAK- 90

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                            ++++   + +K   +     +    E+
Sbjct: 91  -----------------------------AEGALAALEEEIVLKQRGVTEQSYDAQAAED 121

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A      + L   + LF +  +S   ++     +  +   L     + K     
Sbjct: 122 TVRKAEAAQRLAAQTLNRQQALFARGFISAQAVDNARDNLQSANDALASARAQAKGESVG 181

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +                 I+  + + +   AD    L + +   E   + +P  G ++  
Sbjct: 182 VGS---------------IAALVAKKKVMAAD----LALAKLDVEHTLVRAPFDGRVIGL 222

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH-----YADI 358
            + +   +    Q +  +   +K  ++ A     Q++ ++ G  A V         +   
Sbjct: 223 ST-TVGQFVSAGQQVFTLA-DNKNWFVVANFRESQLEQLQPGQKAKVYLMANTRRVFDAQ 280

Query: 359 REKKFKAII---EKIDPI-----ISQQDNNLQTQEYYEVILKITDL 396
            E     ++     I        + +  N ++  + + V +K+TD 
Sbjct: 281 VESVGYGVVPTEGGISSDGGLPQVERSLNWVRVAQRFPVRIKVTDP 326


>gi|325280009|ref|YP_004252551.1| efflux transporter, RND family, MFP subunit [Odoribacter
           splanchnicus DSM 20712]
 gi|324311818|gb|ADY32371.1| efflux transporter, RND family, MFP subunit [Odoribacter
           splanchnicus DSM 20712]
          Length = 416

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 86/253 (33%), Gaps = 31/253 (12%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           I S+         ++ +     +++E KS  L+  +     +L  ++         ++ +
Sbjct: 110 IRSIDDQRDDLDKQITAFREKAIEMEQKSLNLKQQVLQAAYELERLE---------KSYV 160

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             QE        + +  +   +   +  +       L+  + +  I ++L   Q     E
Sbjct: 161 LDQEEYKMGVKSKAQLEVARDEYEYKKKSTALQLEGLQHDSTVTVIRKEL--MQGDLERE 218

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
             K     +  ++  + +P+ G + + +  +       ++ + +I        I   ++ 
Sbjct: 219 KKKFARACERLDKLVVRAPVKGQLSFVKV-TPGQQVGPNESIAEIK-VLDQFKIHTSLSE 276

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD------------NNLQTQ 384
             I  +  G  ATV    Y D +       I ++ P +  +             +N++  
Sbjct: 277 YYIDRITTGLPATVN---YQDEKYPL---KITRVVPEVKDRTFDVDLVFCEKMPDNVRIG 330

Query: 385 EYYEVILKITDLA 397
           + Y V +++    
Sbjct: 331 KSYRVQVELGQPE 343



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 72/220 (32%), Gaps = 7/220 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V + G +     +  + +   G + K   E G  + +G  +L   + E    ID ++  +
Sbjct: 62  VDAEGIVQPILTLK-VNTREGGSVDKIIGEEGVMLEKGDTILILTNPELIRSIDDQRDDL 120

Query: 104 KNLRC--HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                       +     LN K  VL+ A+E    +    L +      K+     + + 
Sbjct: 121 DKQITAFREKAIEMEQKSLNLKQQVLQAAYELERLEKSYVLDQ---EEYKMGVKSKAQLE 177

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +      + +S  L    L++ S++        Q DL   K  F + A  + D      
Sbjct: 178 VARDEYEYKKKSTALQLEGLQHDSTVTVIRKELMQGDLEREKKKFAR-ACERLDKLVVRA 236

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            V      ++    +Q      I E+      +    L E
Sbjct: 237 PVKGQLSFVKVTPGQQVGPNESIAEIKVLDQFKIHTSLSE 276


>gi|301619362|ref|XP_002939062.1| PREDICTED: myosin-6 [Xenopus (Silurana) tropicalis]
          Length = 1937

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 81/206 (39%), Gaps = 8/206 (3%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                    + +   L+  I+     L+  N     L+K   + ++ L ++  K+  + ++
Sbjct: 1407 VNAKCSSLEKTKHRLQNEIEDLMVDLERSNAAAAALDKKQRNFDKVLAEWKQKFEESQTE 1466

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            + +    +  RSL  +L ++++ Y   L+        +    + Q++++ +     +   
Sbjct: 1467 LESSQKDA--RSLSTELFKLKNAYEESLE---HLETFKRENKNLQEEISDLTEQLGEGGK 1521

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            S ++L +  + + +  +EL+  + E +  L H       A LEF     EI R L +   
Sbjct: 1522 SIHELEKIRKQLEQEKMELQTALEEAEASLEHEEGKILRAQLEFNQLKSEIDRKLAEKDE 1581

Query: 272  TFADEM---SKLTILEKTREQKTILS 294
                      +L    +T+ +  I S
Sbjct: 1582 EMEQVKRNNQRLVDALQTQLEAEIRS 1607



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 70/214 (32%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  +D   S ++ +      LEK   + E+Q+ +   KY
Sbjct: 1206 QIDNLQRVKQKLEKEKS--EFKLELDDVASNMEQIVKSKANLEKMCRTLEDQMNENRSKY 1263

Query: 146  HSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                  +         + +    L  +L    ++       +   S     L    ++ +
Sbjct: 1264 EEAQRTLNDISSQKAKLQTENGELNRRLDEKEALVSQMTRGKQTYSQQLEDLKRQLEEES 1323

Query: 201  MMKNLFEKNAVSQND----LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
              KN       S       L +Q     ++  EL+  + +    +      Y+   ++  
Sbjct: 1324 KAKNALAHGLQSARHDCDLLREQYEEEQEAKAELQRILSKANAEVAQWRTKYETDAIQRT 1383

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L+E  + L Q  +   + +  +     + E+ 
Sbjct: 1384 EELEEAKKKLAQRLQEAEEAVEAVNAKCSSLEKT 1417



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 74/175 (42%), Gaps = 6/175 (3%)

Query: 114  KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            K   +FL  + D+ E   +S  E     L K H+      +  I ++ R +K KL + +S
Sbjct: 1166 KREAEFLKLRRDLEESTLQS--EATAAALRKKHADSVAELSEQIDNLQR-VKQKLEKEKS 1222

Query: 174  IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
             +  +L+L++ +S +  ++ S      M + L ++   +++   + +R +   + +  + 
Sbjct: 1223 EF--KLELDDVASNMEQIVKSKANLEKMCRTLEDQMNENRSKYEEAQRTLNDISSQKAKL 1280

Query: 234  IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
              E   + R ++E  +    +     +  S+ LE  +R   +E      L    +
Sbjct: 1281 QTENGELNRRLDE-KEALVSQMTRGKQTYSQQLEDLKRQLEEESKAKNALAHGLQ 1334



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 71/217 (32%), Gaps = 20/217 (9%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            +        + +++     ++ E     ++ L+F   K ++  K  E  EE  ++ + + 
Sbjct: 1532 QLEQEKMELQTALEEAEASLEHEEGKILRAQLEFNQLKSEIDRKLAEKDEE--MEQVKRN 1589

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            +          + +  RS    L   + +  +  ++E + S      S   K L      
Sbjct: 1590 NQRLVDALQTQLEAEIRSRNEALRVKKKMEGDLNEMEIQLSQANRSASEAHKHLKAAHGS 1649

Query: 206  FEKNAVSQNDLNQQ-----------ERIVYKSTLELRE--NIHEQKNMLRHINELYDEAN 252
             +   +  +D  +            ER       EL E  +I EQ    R + E      
Sbjct: 1650 LKDTQMQLDDTMRANDDLKENTAIVERRNMLLQAELEELRSILEQTERSRKLAEQELIET 1709

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E    L   +  L   ++    ++++L    +   Q
Sbjct: 1710 SERVQLLHSQNTSLINQKKKTESDLAQLQAEVEEAVQ 1746



 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 80/208 (38%), Gaps = 9/208 (4%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            T + +   +   + L      ++  +  LN+K +  +      ++++ +   +      +
Sbjct: 1062 TQENVMDLENDKQQLEEKAKKKEFEISQLNSKIEDEQMMGMQLQKKMKEHQARIEELEEE 1121

Query: 152  VFNYGIS-SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD--LTMMKNLFEK 208
            +     + +    L+  L+R       RL+    ++ ++  L+  ++   L + ++L E 
Sbjct: 1122 LEAERTARAKVEKLRSDLSRELEEISERLEEAGGATSVQMELNKKREAEFLKLRRDLEES 1181

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---- 264
               S+       +    S  EL E I   + + + + +   E  LE  +    + +    
Sbjct: 1182 TLQSEATAAALRKKHADSVAELSEQIDNLQRVKQKLEKEKSEFKLELDDVASNMEQIVKS 1241

Query: 265  --DLEQNQRTFADEMSKLTILEKTREQK 290
              +LE+  RT  D+M++     +  ++ 
Sbjct: 1242 KANLEKMCRTLEDQMNENRSKYEEAQRT 1269


>gi|295133443|ref|YP_003584119.1| multidrug resistance protein (substrate binding lipoprotein)
           [Zunongwangia profunda SM-A87]
 gi|294981458|gb|ADF51923.1| putative multidrug resistance protein (substrate binding
           lipoprotein) [Zunongwangia profunda SM-A87]
          Length = 348

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 66/204 (32%), Gaps = 20/204 (9%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            D  Q+  ++ K      +  +E +     + +   E   E           + + +  +
Sbjct: 80  GDFVQKGALLAKVDATAYKEEYEARKAQADLAKENYERIEEVYQKGSIAEIKMIEARSNY 139

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +      +  +   + +P +G I   +     + A   +P+ +++  +    ++A 
Sbjct: 140 NQANAAANATFQNVKHSKLYAPFSGYI-GAKIMEPGDLASPGRPVFQLLDINN---VKAA 195

Query: 334 VTPKQ--IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           +      I  +KKG +A V+     D     F   + +I    +QQ+            +
Sbjct: 196 IPIPDGEINQLKKGDSAKVKIDALGDR---FFFGKVAEISIQSNQQNP-----------V 241

Query: 392 KITDLAFSDNNIELRNGFPAEVLF 415
            I  +   +    ++ G       
Sbjct: 242 YIAQILLKNPERSIKPGMSCSAFI 265


>gi|163751172|ref|ZP_02158401.1| cation efflux protein, putative [Shewanella benthica KT99]
 gi|161329001|gb|EDQ00074.1| cation efflux protein, putative [Shewanella benthica KT99]
          Length = 414

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 51/131 (38%), Gaps = 2/131 (1%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++  +      E   + R        +    A    E+ R + +  +  + +++KL 
Sbjct: 159 AVAQAQADYINAAAEWSRVKRMGKSAVSASRRLQAQVDAELKRAILEAMKMTSAQITKLA 218

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
               T     +L+PI G +  + +            LM++       ++ A+VTP Q ++
Sbjct: 219 STPSTIGSYQLLAPIDGRVQQDLAM-LGQVITSGTALMQLT-DESHLWVEAQVTPAQSEN 276

Query: 342 VKKGYTATVRF 352
           ++ G  A VR 
Sbjct: 277 IRVGSEALVRV 287


>gi|170018172|ref|YP_001723126.1| secretion protein HlyD family protein [Escherichia coli ATCC 8739]
 gi|169753100|gb|ACA75799.1| secretion protein HlyD family protein [Escherichia coli ATCC 8739]
          Length = 378

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLNGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 347


>gi|2822198|gb|AAB97960.1| ATP-binding cassette transporter-like protein [Streptococcus
           cristatus]
          Length = 421

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL           +  ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYVTSQELTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +     + +++        +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQAKANSITAAQTSASIKWETYNRKLANLNTLKNKYNSSKDESLLDQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 SLSDAKTADNEVTNAQIEAEKAQVTAQTES 208



 Score = 36.5 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 58/170 (34%), Gaps = 22/170 (12%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +++L  I    DE     ++  K    ++   Q                 +  T+ +  A
Sbjct: 163 ESLLDQIKSAEDELAQSLSDA-KTADNEVTNAQIEAEKAQVTAQTESDRMKYDTVTADTA 221

Query: 298 GTIVYNQ--SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           GTI        + S   ++ +  ++I+     T I+  V+    + +  G    V     
Sbjct: 222 GTITSMNEDLPTQSKAKKEEETFIEIM-DKSKTLIKGSVSEFDREKLSVGQRVDV----- 275

Query: 356 ADIREKK--FKAIIEKIDPIIS-----------QQDNNLQTQEYYEVILK 392
            D ++ K  +   + ++  + +           QQ+N  Q +  Y V L 
Sbjct: 276 VDRKDPKKRWSGTVTQVGTLTTANTGNSNGGNKQQENPNQGKFPYTVELD 325


>gi|325967938|ref|YP_004244130.1| chemotaxis sensory transducer [Vulcanisaeta moutnovskia 768-28]
 gi|323707141|gb|ADY00628.1| chemotaxis sensory transducer [Vulcanisaeta moutnovskia 768-28]
          Length = 486

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 90/223 (40%), Gaps = 22/223 (9%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF-----------------LNNKYDVLEK 129
            +       + +++ SI+ +R  +++++ AL+                  L+N+      
Sbjct: 185 LDISRRESDVSVREKSIEEIRQRLESDRKALEEEKAKLAEMSNVMASLITLSNQLTSRLS 244

Query: 130 AFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
             +SRE+ LL+         +K+  +   + S  + L+M+  R+ +      +LE K   
Sbjct: 245 ELDSREKALLEREKALGERETKLRDWEVELKSREQRLEMEAVRIDAENARLRELEKKEQE 304

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHI 244
           ++  L    +    +K L +K    QN LN+ E  +      L      + E++N L+ +
Sbjct: 305 VKERLEQLSQREAELKELEKKLNERQNALNKLEAELKDKESRLNSLENLLKERENALKSL 364

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           ++  ++   E    L+ +   L + ++   D   +L   E+  
Sbjct: 365 DDEINKRRKEIMEKLEPLMTKLIEEEKRLTDWEKRLLDKEREL 407



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 68/181 (37%), Gaps = 5/181 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E  + +  ++  +K L   ++  ++AL+ L  +    E    S E  L +      S   
Sbjct: 307 ERLEQLSQREAELKELEKKLNERQNALNKLEAELKDKESRLNSLENLLKERENALKSLDD 366

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++ N     +   L+  +T++        D E +       L ++Q+ L + +N      
Sbjct: 367 EI-NKRRKEIMEKLEPLMTKLIEEEKRLTDWEKRLLDKERELMNYQRALIIREN----TL 421

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V   +   +E+   +S ++    I  +   +R   E   +   E    ++   ++L Q +
Sbjct: 422 VELREKLDREKEELESKMKEVSKIESECQDIRKKYEQLLKEREELMKIIESKDKELNQLR 481

Query: 271 R 271
            
Sbjct: 482 A 482


>gi|228472635|ref|ZP_04057395.1| HlyD family secretion protein [Capnocytophaga gingivalis ATCC
           33624]
 gi|228276048|gb|EEK14804.1| HlyD family secretion protein [Capnocytophaga gingivalis ATCC
           33624]
          Length = 308

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 107/290 (36%), Gaps = 32/290 (11%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A+E  E + L    K      +V       V  ++     +  +       + ++  + +
Sbjct: 45  AYEVEEGKTLTEGQKVGQINVEVLKLQKEQVEATISSLKEKTLNPADQVALIRSQYEVQK 104

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L   +++LT ++ L    A +Q  L+    IV +   +L    ++ +  L +IN    
Sbjct: 105 AQLEQQERELTRVRQLVAGGAATQKQLDDLTAIVEQLHKQLAVTQNQLRVSLTNINTQNR 164

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
               + A   K                      ++    Q  I++PIAGT++ N +    
Sbjct: 165 NVMSQEAPLQKNAE------------------AVQVQINQGEIINPIAGTVLVNYAL-KG 205

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                 +PL KI  + +   ++A +T  Q+  +K G   TVR     +  ++ +   I  
Sbjct: 206 EMQTFGKPLYKIA-NMETLTLKAYITGDQLPQIKLGQQVTVRTDA-GEGAQRTYGGGITY 263

Query: 370 IDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRNGFPAEVL 414
           I          +QT+       Y + +K+       N+  L+ G   EV+
Sbjct: 264 IASKAEFTPKTIQTKSERANLVYAIKVKV------KNDGYLKIGMYGEVV 307


>gi|170680028|ref|YP_001745742.1| MFP family transporter [Escherichia coli SMS-3-5]
 gi|170517746|gb|ACB15924.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli SMS-3-5]
          Length = 355

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 49/404 (12%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  I   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAIAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|91210858|ref|YP_540844.1| hypothetical protein UTI89_C1835 [Escherichia coli UTI89]
 gi|91072432|gb|ABE07313.1| hypothetical protein YdhJ [Escherichia coli UTI89]
          Length = 299

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 23/209 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K    +  ++       +  N+ +   V+  DL            EL     +     
Sbjct: 51  DGKIRAEQVSITPQVSGRIIELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQ 109

Query: 242 RHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +  +EAN           A  L   + +++  Q +     + L   +    Q  I 
Sbjct: 110 SGLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIR 169

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTAT 349
           +P++G +    +    +YA   +PL  +V       I      K+      H+++G  A 
Sbjct: 170 APVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQ 223

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +          K  +  +  I   I  Q 
Sbjct: 224 ITL----YSDNKTLQGHVSSIGRAIYDQS 248



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 54/177 (30%), Gaps = 21/177 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 15  MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRII 70

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  +++   +  G  LLT +           +++  N +  +   +S L   NN+ +   
Sbjct: 71  ELNIKDNQLVNAGDLLLTIDKTPF-------QIAELNAQAQLAKAQSGLAKANNEANRRR 123

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                             +      N  + ++  S+      ++         E ++
Sbjct: 124 HLS----------QNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 170


>gi|170018282|ref|YP_001723236.1| secretion protein HlyD family protein [Escherichia coli ATCC 8739]
 gi|188492175|ref|ZP_02999445.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 53638]
 gi|191165301|ref|ZP_03027144.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B7A]
 gi|193071507|ref|ZP_03052418.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E110019]
 gi|194435890|ref|ZP_03067993.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 101-1]
 gi|253771683|ref|YP_003034514.1| secretion protein HlyD [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254038657|ref|ZP_04872713.1| auxiliary transporter [Escherichia sp. 1_1_43]
 gi|254163411|ref|YP_003046519.1| putative HlyD family secretion protein [Escherichia coli B str.
           REL606]
 gi|256025788|ref|ZP_05439653.1| hypothetical protein E4_20621 [Escherichia sp. 4_1_40B]
 gi|300929701|ref|ZP_07145157.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 187-1]
 gi|301017879|ref|ZP_07182520.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 196-1]
 gi|301645432|ref|ZP_07245371.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 146-1]
 gi|307140173|ref|ZP_07499529.1| hypothetical protein EcolH7_18810 [Escherichia coli H736]
 gi|309797507|ref|ZP_07691897.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 145-7]
 gi|312972248|ref|ZP_07786422.1| hlyD family secretion family protein [Escherichia coli 1827-70]
 gi|331644189|ref|ZP_08345318.1| putative membrane protein [Escherichia coli H736]
 gi|331655093|ref|ZP_08356092.1| putative membrane protein [Escherichia coli M718]
 gi|169753210|gb|ACA75909.1| secretion protein HlyD family protein [Escherichia coli ATCC 8739]
 gi|188487374|gb|EDU62477.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 53638]
 gi|190904703|gb|EDV64409.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B7A]
 gi|192955184|gb|EDV85676.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E110019]
 gi|194425433|gb|EDX41417.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 101-1]
 gi|226839163|gb|EEH71186.1| auxiliary transporter [Escherichia sp. 1_1_43]
 gi|242379008|emb|CAQ33806.1| predicted HlyD family secretion protein [Escherichia coli
           BL21(DE3)]
 gi|253322727|gb|ACT27329.1| secretion protein HlyD family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975312|gb|ACT40983.1| predicted HlyD family secretion protein [Escherichia coli B str.
           REL606]
 gi|253979468|gb|ACT45138.1| predicted HlyD family secretion protein [Escherichia coli
           BL21(DE3)]
 gi|299882626|gb|EFI90837.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 196-1]
 gi|300462359|gb|EFK25852.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 187-1]
 gi|301076286|gb|EFK91092.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 146-1]
 gi|308118859|gb|EFO56121.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 145-7]
 gi|309703895|emb|CBJ03236.1| putative type I secretion system, inner membrane protein
           [Escherichia coli ETEC H10407]
 gi|310334625|gb|EFQ00830.1| hlyD family secretion family protein [Escherichia coli 1827-70]
 gi|315618482|gb|EFU99069.1| hlyD family secretion family protein [Escherichia coli 3431]
 gi|323934731|gb|EGB31121.1| HlyD family protein secretion protein [Escherichia coli E1520]
 gi|323939474|gb|EGB35684.1| HlyD family protein secretion protein [Escherichia coli E482]
 gi|323959491|gb|EGB55145.1| HlyD family protein secretion protein [Escherichia coli H489]
 gi|323971395|gb|EGB66633.1| HlyD family protein secretion protein [Escherichia coli TA007]
 gi|331036483|gb|EGI08709.1| putative membrane protein [Escherichia coli H736]
 gi|331047108|gb|EGI19186.1| putative membrane protein [Escherichia coli M718]
 gi|332345444|gb|AEE58778.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 355

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|296121838|ref|YP_003629616.1| efflux transporter RND family, MFP subunit [Planctomyces
           limnophilus DSM 3776]
 gi|296014178|gb|ADG67417.1| efflux transporter, RND family, MFP subunit [Planctomyces
           limnophilus DSM 3776]
          Length = 503

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 94/273 (34%), Gaps = 36/273 (13%)

Query: 38  LPIEISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
            P++ +++ +G+I LNED +  +     G +   +V  G ++ QG  L+    +  +  +
Sbjct: 88  GPLDEAITLTGKISLNEDKLAHVFPLVEGRVDDVRVRFGQKVRQGDLLV----VVQSKEV 143

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              K+ +   R  ++   +         D   +        L++ +              
Sbjct: 144 GQGKLQLFQDRLKLEFAMAR--------DRWAQEISQNTLSLIEMIRS------------ 183

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNAVSQN 214
                   +  +  + +    R   E++ +L+ A L++ +      +   L    AV   
Sbjct: 184 --------EAAIENIETALKERTMGEHRQTLMNAYLAAIRAQSQTQRLAPLSGTGAVPAK 235

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L   E  V  +   L+  + +    +   + L  ++  E    +     +L+    T  
Sbjct: 236 QLLDAETDVKATKAILQALLEQTSQDVIQASRLSTQSVKELQTTIAVAETNLKILGFTDH 295

Query: 275 DEMS-KLTILEKTREQKTILSPIAGTIVYNQSF 306
           D      + + +      +++P  GT++     
Sbjct: 296 DLKEIDPSEMGENLAHYPVVAPFDGTVISKDVV 328


>gi|218260185|ref|ZP_03475583.1| hypothetical protein PRABACTJOHN_01244 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224696|gb|EEC97346.1| hypothetical protein PRABACTJOHN_01244 [Parabacteroides johnsonii
           DSM 18315]
          Length = 339

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 91/287 (31%), Gaps = 77/287 (26%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GI+++  VE G+Q+ +G  ++   +                                 
Sbjct: 3   EGGIVQEKVVEEGAQVKKGDVIIRLSN--------------------------------- 29

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                     + + Q+LD   +     + + N  ++     L  +L              
Sbjct: 30  ---------SNLDLQILDAEAQLAEKQNFLRNTQVTMEQDKLNNQL-------------- 66

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            + + L   ++ +++     K L+E+N +++ +  +      K   EL    ++      
Sbjct: 67  -EKAQLDVDMTRYRRAYNQQKKLYEENLIAKEEFLK-----AKEDFELASKKYDL----- 115

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + E   + ++     + E+   L   ++  A    +       +E   + S I G  + 
Sbjct: 116 -VVERLRQDSISRTIQMDEMETSLSNMRKNIALVHER-------KEHLNVRSQIDGE-LG 166

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
                        Q + +I   S    I A +    I  VKKG +AT
Sbjct: 167 LLDVVLGQNVSAGQKIGQINDLSD-YKIEALIDEHYIDRVKKGLSAT 212


>gi|182677802|ref|YP_001831948.1| secretion protein HlyD family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182633685|gb|ACB94459.1| secretion protein HlyD family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 351

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 87/301 (28%), Gaps = 35/301 (11%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            ++ +   ++  F  R  +LL   G   +    V       +   L  +   +R      
Sbjct: 66  RIDAREIDIDTKFAGRVYELLVDEGDMVTEGQVVARMDTRDLQAQLGREEALVRQNEHAI 125

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            + E   + L+   +  Q +L     LF++   ++   +Q+ + +  +   L+       
Sbjct: 126 AEAEANVAQLKTQQALAQMELDRTSALFKRGYATRELYDQRFQALNGANETLKAAQARVV 185

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                 +       L+  N                                 T+++P AG
Sbjct: 186 EAHHAYDAAKHNVELDQVN-----------------------------INDNTLVAPRAG 216

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD- 357
            I Y +  S          +  ++  S   Y+   +   +   VK G  A +    Y + 
Sbjct: 217 RIQY-RISSLGEILPAGGKIFSMIDISD-VYMDIYLPTLEAGRVKIGNDARIVLDAYPEH 274

Query: 358 --IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               +  F A   +  P   +  +      +  V ++I           +R G P     
Sbjct: 275 PIRSKVTFLATQAQFTPKAVETKSERDKLMF-RVKVRIDPDILKKYADSVRTGLPGNAYV 333

Query: 416 T 416
            
Sbjct: 334 R 334



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 56/152 (36%), Gaps = 11/152 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
              V  +G I  +   ++I + F+G + +  V+ G  + +G  +   +  +    +  ++
Sbjct: 58  AGIVWGNGRI--DAREIDIDTKFAGRVYELLVDEGDMVTEGQVVARMDTRDLQAQLGREE 115

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES---------REEQLLDFLGKYHSTCSK 151
             ++     I   ++ +  L  +  + +   +             +L D   +  +  ++
Sbjct: 116 ALVRQNEHAIAEAEANVAQLKTQQALAQMELDRTSALFKRGYATRELYDQRFQALNGANE 175

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                 + V  +         ++ L+++++ +
Sbjct: 176 TLKAAQARVVEAHHAYDAAKHNVELDQVNIND 207


>gi|167625837|ref|YP_001676131.1| RND family efflux transporter MFP subunit [Shewanella halifaxensis
           HAW-EB4]
 gi|167355859|gb|ABZ78472.1| efflux transporter, RND family, MFP subunit [Shewanella
           halifaxensis HAW-EB4]
          Length = 372

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 80/215 (37%), Gaps = 25/215 (11%)

Query: 208 KNAVSQNDL-NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS--- 263
              VS     N  +  V +  +EL   + +     + +     EA+ +  + L + +   
Sbjct: 77  SGVVSAIRFENGSKVEVGQMLIELDSKVEKANLKSKQVQLPAAEADFKRLSKLYKQNSVS 136

Query: 264 -RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
            +DL+ +Q  +   M+    L  T  ++ I +P AG +   ++ +   Y Q      +IV
Sbjct: 137 KQDLDNSQSKYLALMADSESLSATIGRREIRAPFAGLV-GIRNVNLGEYLQTGS---EIV 192

Query: 323 PHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
                    IR  +   Q+  +  G    V    Y     + F+ +I  I+P +      
Sbjct: 193 RLEDISTMKIRFTIPQTQLSRIATGQKVHVYVDAYP---TEPFEGVISAIEPAV------ 243

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                +Y+  L        + + +LR+G  A+V  
Sbjct: 244 -----FYQSGLIQVQARIPNTDAKLRSGMFAKVDI 273



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 93/290 (32%), Gaps = 26/290 (8%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G I     V  I +  SG++   + ENGS++  G  L+  +       +  K+V +  
Sbjct: 60  AIGFIEPNQGV-TIANQVSGVVSAIRFENGSKVEVGQMLIELDSKVEKANLKSKQVQLPA 118

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                          +     L+ +       + D      +   +      + +     
Sbjct: 119 AEADFKRLSKLYKQNSVSKQDLDNSQSKYLALMADSESLSATIGRREIRAPFAGLVGIRN 178

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-------------KNAVS 212
           + L          + LE+  S ++   +  Q  L+ +    +             +  +S
Sbjct: 179 VNLGEYLQTGSEIVRLED-ISTMKIRFTIPQTQLSRIATGQKVHVYVDAYPTEPFEGVIS 237

Query: 213 QND--------LNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEIS 263
             +        L Q +  +  +  +LR  +  +   ML  + +         +  L   S
Sbjct: 238 AIEPAVFYQSGLIQVQARIPNTDAKLRSGMFAKVDIMLPELTQQVVLPQTAISFTLYGDS 297

Query: 264 RDLEQNQRTFADEMSKLTILE-KTREQKTILSPIAGTI-VYNQSFSSSNY 311
             + + +    +++ ++  +  K  E+  I + ++G I   +   +S   
Sbjct: 298 VYIIEEKSENGEQIKRVKQVNVKVLERDDINALVSGGISAGDTIVTSGQV 347


>gi|163869205|ref|YP_001610457.1| putative secretion protein [Bartonella tribocorum CIP 105476]
 gi|161018904|emb|CAK02462.1| putative secretion protein [Bartonella tribocorum CIP 105476]
          Length = 407

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 81/258 (31%), Gaps = 50/258 (19%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              DL+ K + L    ++  +    + +L +KN   Q  + +   I   +  +    +  
Sbjct: 105 QENDLKRKKAALSHYYANLVEQEAYL-SLAQKNLERQKKMIESRAISKANLDDAATQVKI 163

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           ++  +  + +   +A ++  +                          E       I +P 
Sbjct: 164 REAQIAQLRQQIVQAQIDVES-------------------------AEVNLGYTRITAPS 198

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           AGT++              Q    IV         ++A+++   I  V+ G    + F  
Sbjct: 199 AGTVLA-TVVEEGQNVNAVQSAPTIVILGDLSKMTVKAQISEADILKVRAGQP--LYFTV 255

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQE-------------YYEVILKITDLAFSDN 401
             +   ++++  +E++DP       ++                 YY  I+ +      + 
Sbjct: 256 LGNSN-RRYEGTLERVDPAPESIRADVSINPGAGGSSSLISSAIYYNGIVHVD-----NK 309

Query: 402 NIELRNGFPAEVLFTAKN 419
           +  LR    A+V      
Sbjct: 310 DNFLRTYMTAQVHIILGR 327



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 58/138 (42%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV +SG +     +V + +  +G +   +V  GS + +G  L   +  +  + +  K
Sbjct: 54  IEESVLASGLVRPY-RLVAVGARTTGRVISMRVFPGSVVKEGDLLAEIDPTDQENDLKRK 112

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K ++ +   ++  +++ L       +  +K  ESR     +      +T  K+    I+ 
Sbjct: 113 KAALSHYYANLVEQEAYLSLAQKNLERQKKMIESRAISKANLDDA--ATQVKIREAQIAQ 170

Query: 160 VYRSLKMKLTRMRSIYLN 177
           + + +      + S  +N
Sbjct: 171 LRQQIVQAQIDVESAEVN 188


>gi|219668484|ref|YP_002458919.1| efflux transporter RND family, MFP subunit [Desulfitobacterium
           hafniense DCB-2]
 gi|219538744|gb|ACL20483.1| efflux transporter, RND family, MFP subunit [Desulfitobacterium
           hafniense DCB-2]
          Length = 391

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 92/281 (32%), Gaps = 45/281 (16%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            + +      +    G   +    +     +++        + +S+      +   KD  
Sbjct: 83  LIKRIAVETGQQVQKGDLLLSMDREQLEISLKNAAELLNQAKAQSAAGEEAYTMALKDYD 142

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             ++L E  A S+ +L Q+E  +  +      N    +                      
Sbjct: 143 NTRSLAEAGAASEWELTQKEAALKSAEAVRSGNQAALEQA-------------------- 182

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
               +L     + A              ++ +L+P+ GTI+  +    + +      +  
Sbjct: 183 ----ELSVATSSLA------------LSKQQVLAPLKGTILQKRV-EVNAFGVPG-TVAF 224

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           ++  ++   I+AK+  +    ++ G  AT+         ++     + KI P    + ++
Sbjct: 225 VIGDTENLEIQAKILAEDAASIQVGNKATLTV---RTKEQQTLAGTVVKIAPTAEDEVSS 281

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           L  ++  +V + I  L   D  + L  G   +V    +  +
Sbjct: 282 LGVKQK-KVTVTIKPL---DAQVALLPGSEVDVRVITETKS 318



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 110/342 (32%), Gaps = 50/342 (14%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGL-ITW-------------SILLPIEISVSSSGEILN 52
           KN KRN   + K + ++ I+ ++   + W             + L  I+  V  +GE+  
Sbjct: 11  KNDKRNMRLTKKLLWVIGILLVLAAGLGWTLSNRGTPAETAPAKLGDIQKYVEETGEVKC 70

Query: 53  EDNVVEIKSPFS-GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            D+          G+IK+  VE G Q+ +G  LL+ +  +    +      +   +    
Sbjct: 71  SDSATV--YLEGSGLIKRIAVETGQQVQKGDLLLSMDREQLEISLKNAAELLNQAKAQSA 128

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + A       YD      E+      +   K             +++  +  ++    
Sbjct: 129 AGEEAYTMALKDYDNTRSLAEAGAASEWELTQKE------------AALKSAEAVRSGNQ 176

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA----------VSQNDLNQQER 221
            ++    L +   S  L           T+++   E NA          +   +  + + 
Sbjct: 177 AALEQAELSVATSSLALSKQQVLAPLKGTILQKRVEVNAFGVPGTVAFVIGDTENLEIQA 236

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +      L E+    +   +    +  +     A  + +I+   E    +   +  K+T
Sbjct: 237 KI------LAEDAASIQVGNKATLTVRTKEQQTLAGTVVKIAPTAEDEVSSLGVKQKKVT 290

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSS---SNYAQQSQPLMK 320
           +  K  + +  L P  G+ V  +  +          +  +  
Sbjct: 291 VTIKPLDAQVALLP--GSEVDVRVITETKSGVVIVPAGAVFD 330


>gi|47213005|emb|CAF95397.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2594

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/191 (9%), Positives = 59/191 (30%), Gaps = 2/191 (1%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           ED +        +          + E  A      +    ++    R+E       +  +
Sbjct: 527 EDRKERSFQTQPQEQEVQAHLRAEQELQAHRQEELQAHRQQELQAHRQELQAHRQQELQA 586

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              ++  +    +    + +L   R   L      E ++   + L +  Q++L   +   
Sbjct: 587 HRQELQAHRQQELQAHRQQELQAHRQEELQAHRQQELQAHRQQELQAHRQEELQAHRQEE 646

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE-LYDEANLEFANYLKEISRD 265
            +    +   ++Q+ +      EL+ +  E +   + +      E             ++
Sbjct: 647 LQAHRQELQAHRQQELQAHRQQELQAHRQELQAHRQELQAHRQQELQAHRQELQAHRQQE 706

Query: 266 LEQNQRTFADE 276
           L+ +++    +
Sbjct: 707 LQAHRQELLSQ 717



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 79/233 (33%), Gaps = 24/233 (10%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDT------------EKSALDFLNNKYDVLEK 129
            P+     +  + L   ++  +++LR                  ++     + + D  E+
Sbjct: 473 QPVQESRKVVRSSLDGQEERQLRSLRASQAAGDHQTSSHHYSQLQNVPQVPSEQEDRKER 532

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           +F+++ ++             +         +R  +++  R       + +L+     L+
Sbjct: 533 SFQTQPQEQEVQAHLRAEQELQAHRQEELQAHRQQELQAHRQELQAHRQQELQAHRQELQ 592

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLN--QQERIVYKSTLELRENIHE------QKNML 241
           A     Q++L   +   E  A  Q +L   +Q+ +      EL+ +  E      Q+ + 
Sbjct: 593 A---HRQQELQAHRQ-QELQAHRQEELQAHRQQELQAHRQQELQAHRQEELQAHRQEELQ 648

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            H  EL      E   + ++  +   Q  +    E+      E    ++ + +
Sbjct: 649 AHRQELQAHRQQELQAHRQQELQAHRQELQAHRQELQAHRQQELQAHRQELQA 701


>gi|107099746|ref|ZP_01363664.1| hypothetical protein PaerPA_01000764 [Pseudomonas aeruginosa PACS2]
          Length = 412

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 52/390 (13%), Positives = 113/390 (28%), Gaps = 90/390 (23%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P+   +   G +     VV + +PF+G ++   VE G ++ +G  LL  +  E    + 
Sbjct: 37  APLVHQIGLVGRLEP-GRVVTLAAPFAGNVEALLVEPGQRVAEGQELLRMDTREIAVQVR 95

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   R  +   +                                           
Sbjct: 96  EAQSALLKARRTLQDLRDW----------------------------------------- 114

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                 +      +RS  L +   E K    R L          + +L ++ +  + DL 
Sbjct: 115 -ERGEDMARVRRALRSAQLAQSSTERKLRETRELFQRGIVPRNELDDLEQQASQQRMDLE 173

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
              R V  +  + +    +   M                        DL      +    
Sbjct: 174 AARREVESTRAKGQGENRQIAEM------------------------DLANASVKYETLQ 209

Query: 278 SKLTILEKTREQKTILSPIAGTIVYN----------QSFSSSNYAQQSQPLMKIVPHSKL 327
           ++L         +T+ +P AG +V            +   + +   Q Q L  +    + 
Sbjct: 210 AQLDG-------RTVRAPFAGIVVAAPGLAGEQGSREPVQAGSKLGQGQALFGLA-SVER 261

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + AKV+   I  +++G    +    +          +I  +            + ++ 
Sbjct: 262 LKVSAKVSELDINQLREGQAVEISGDGFEGTT---LAGVIAALGGQALPGMAQGGSPQF- 317

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           EV + +  L       ++R G  A++  T 
Sbjct: 318 EVTVSVAPLDPRQLQ-KIRLGMSAKLTVTT 346


>gi|308274432|emb|CBX31031.1| Uncharacterized protein yhiI [uncultured Desulfobacterium sp.]
          Length = 357

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 74/201 (36%), Gaps = 3/201 (1%)

Query: 19  RMTLLSIIGIIGLITWSILLPIE-ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           R  ++ I+       W IL P +  S  +SG    E   +++ +  +G IK+  V+ G  
Sbjct: 11  RFIVILILAASAFGLWWILKPRDPDSNFASGNGRVEATEIDVAAKAAGRIKEIFVDEGDM 70

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G      +    T  +   +  ++  +    T ++ +    ++          RE +
Sbjct: 71  VKAGQVAARMDTQVLTANLIQAQAQVRQAQNAKATAQAIVAQRESEKATAHAIAVQRESE 130

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           LL    K     S++     +   + +     RM+S     +  +++    ++ + + + 
Sbjct: 131 LLVAQKKLQ--RSEILVAEHAVSAQEVDDDSARMQSAKAAFVAAQSQVIAAQSSIEAARS 188

Query: 198 DLTMMKNLFEKNAVSQNDLNQ 218
            +   ++  E    +   +N 
Sbjct: 189 QVIQAQSAIEAALANVERINA 209


>gi|262041423|ref|ZP_06014626.1| inner membrane protein YibH [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259041217|gb|EEW42285.1| inner membrane protein YibH [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 380

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 86/296 (29%), Gaps = 48/296 (16%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           ++   +  Q+L       +     F   +  +   +K       S+       + + S  
Sbjct: 75  QSVPVKPNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSLNAALSQAQAELSRA 134

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A     +++    +    + A S   ++ + +        +                  
Sbjct: 135 VAQRDQSRREYARYREGHAQGAFSDQMVDTRLQTWKADEASVSA---------------- 178

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A  +       +   ++    T A  +++L   +   E   + +P  G +      + 
Sbjct: 179 --AQAKVVQARNALDSVVKGKNTTVASLLAQLQKAQFQLENTVVRAPEDGYV-----STV 231

Query: 309 SNYAQQSQ--------PLMKIVPHSKLTYIR--AKVTPKQIQHVKKGYTATVRFPHYADI 358
               +           PLM  VP          A      +Q + KG  A + FP     
Sbjct: 232 G--LRPGTMSTALGMIPLMTFVPVEGAASREYVAAFRQNALQRLHKGEPAELMFPAIPGT 289

Query: 359 REKKFKAIIEKIDPIISQ----------QDNNLQTQEYYEVILKITDLAFSDNNIE 404
               F+  +  + P I +            + L T     V+LK+TD  F++  + 
Sbjct: 290 ---VFRGEVADVLPAIGESQFQGQGKLLTTDALNTHGRALVVLKVTDPRFAEYALP 342



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 51/173 (29%), Gaps = 10/173 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LR 107
             V I S   G ++   V+    + +G  L T +       +D  +  IK        L 
Sbjct: 62  RTVPIVSQVRGRVQSVPVKPNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSLN 121

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
             +   ++ L     + D   + +    E      F  +   T  + +    +SV  +  
Sbjct: 122 AALSQAQAELSRAVAQRDQSRREYARYREGHAQGAFSDQMVDTRLQTWKADEASVSAAQA 181

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLN 217
             +    ++           + L A L   Q  L        E   VS   L 
Sbjct: 182 KVVQARNALDSVVKGKNTTVASLLAQLQKAQFQLENTVVRAPEDGYVSTVGLR 234


>gi|289208526|ref|YP_003460592.1| efflux transporter RND family, MFP subunit [Thioalkalivibrio sp.
           K90mix]
 gi|288944157|gb|ADC71856.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           K90mix]
          Length = 409

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 65/208 (31%), Gaps = 31/208 (14%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFAN-YLKEISRDLEQNQRTFAD-----EMSK 279
           S  E   + +  +  L+   EL D+     +     E    L Q +   A+       S 
Sbjct: 125 SLAEAVASRNAAQRDLQRTRELRDQGIASRSELEAAETELALAQTRVALAESQIRQRRSA 184

Query: 280 LTILEKTREQKTILSPIAGTI--VYNQSFSSSNYAQQSQPLMKIV---PHSKLTYI-RAK 333
           L   E       I +    T   V  +     +    ++P + +V   P   +  +  A 
Sbjct: 185 LRTREIQLGYTRIDADPGSTTRWVAERLVDPGSVISANEPALALVTLQPVRAILAVTEA- 243

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
                   + +G  ATVR   Y D     F+  I +I P               +  +++
Sbjct: 244 ----DYSRISRGQEATVRTSSYPDA---LFEGTITRISPEFRPGSR--------QARIEV 288

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                 +++  LR G   E   T    +
Sbjct: 289 ---EVPNDDERLRPGMFVETAITLGQRS 313



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/341 (10%), Positives = 90/341 (26%), Gaps = 40/341 (11%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEI--------------SVSSSGEI--------- 50
           P     +TL+  +   G++ W    P +                  +   +         
Sbjct: 2   PKLSTLITLVLFLLAGGVLAWLFWGPDDEQASSARAGGGETRPVAVAVASVQQQDLVERR 61

Query: 51  -----LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK----- 100
                +   + + I     G + +  V  G ++  G PLL  +  E    +   +     
Sbjct: 62  RFTGSIEGGDRIVITPRVGGRVAEVFVNLGDRVEPGDPLLQLDTEEFEQDVTQAEAELEV 121

Query: 101 -----VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
                      R     +      L ++        E+ E +L     +     S++   
Sbjct: 122 AEASLAEAVASRNAAQRDLQRTRELRDQGIASRSELEAAETELALAQTRVALAESQIRQR 181

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             +   R +++  TR+ +   +      +  +    + S  +    +  L    A+    
Sbjct: 182 RSALRTREIQLGYTRIDADPGSTTRWVAERLVDPGSVISANEPALALVTLQPVRAILAVT 241

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                RI       +R + +        I  +  E          E+    +  +     
Sbjct: 242 EADYSRISRGQEATVRTSSYPDALFEGTITRISPEFRPGSRQARIEVEVPNDDERLRPGM 301

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
            +     L +  +   I  P    I      +  +  +  +
Sbjct: 302 FVETAITLGQRSDTLAI--PRDAIIQREAGPTLFSVDRSGE 340


>gi|194365188|ref|YP_002027798.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194347992|gb|ACF51115.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 304

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 90/265 (33%), Gaps = 25/265 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++       K         +    ++D  G   +    V     ++  +           
Sbjct: 26  EAPAQASAGKASTAAADKVAVARGIIDVEGGLIALAPPVDGSITAAPVKEGATVKKGQLL 85

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           + L+   L+ + ++  A L+     L            SQ  L + ER   + +    E 
Sbjct: 86  LSLDGALLQQEVAMATADLALANDRLKG----------SQAQLRELERNATRLSTGASEG 135

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +          N+  D A  + A    ++  D+   Q   A    KL   +   +Q ++ 
Sbjct: 136 VSS--------NQQADAARQQLAGVRADV--DVAGAQVDMAQ--HKLEHAKLKLQQMSLS 183

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P AGT+V  Q      + Q  +P + ++P  +   +RA+++      V+ G  A V   
Sbjct: 184 APEAGTVVG-QVPGLGAFVQGGKPAISLLPA-RPLQVRAELSAAYADAVQVGMKAAVVPD 241

Query: 354 HYADIREKKF-KAIIEKIDPIISQQ 377
                       A + +I P+ +Q 
Sbjct: 242 SDGAENTGSLPPARVVRISPVFAQA 266



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/149 (10%), Positives = 41/149 (27%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +     +    + G I  E  ++ +  P  G I    V+ G+ + +G  LL+ +      
Sbjct: 36  ASTAAADKVAVARGIIDVEGGLIALAPPVDGSITAAPVKEGATVKKGQLLLSLDGALLQQ 95

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + +    +      +   ++ L  L      L                          +
Sbjct: 96  EVAMATADLALANDRLKGSQAQLRELERNATRLSTGASEGVSSNQQADAARQQLAGVRAD 155

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             ++     +         + L ++ L  
Sbjct: 156 VDVAGAQVDMAQHKLEHAKLKLQQMSLSA 184


>gi|154173681|ref|YP_001408249.1| MacA [Campylobacter curvus 525.92]
 gi|112802813|gb|EAU00157.1| MacA [Campylobacter curvus 525.92]
          Length = 402

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 52/132 (39%), Gaps = 3/132 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           ++       V ++GEI     +V++ +   G IKK  V+ G  + +G  +   +     +
Sbjct: 40  AVKGSFSKKVDATGEI-FATELVDVGAQVGGQIKKLYVKLGDNVKKGDLIAEIDSSTQQN 98

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +D K+  ++     +++ K ALD    +Y+  +  F        +F    ++  S    
Sbjct: 99  NVDNKEAQLRIYEAQLESAKVALDISKTQYEREKGLFAKNATSKQEFETAKNTYASN--E 156

Query: 155 YGISSVYRSLKM 166
             +  +   +  
Sbjct: 157 AKLKEIKAQINQ 168



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 86/247 (34%), Gaps = 16/247 (6%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E+     ++ +     K      ++F   +  V   +  ++   + +Y+   D   K  L
Sbjct: 31  ERVEFITQKAVKGSFSKKVDATGEIFATELVDVGAQVGGQI---KKLYVKLGDNVKKGDL 87

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           +  + SS Q++    K        +Q  + + +    K  L++ +  +E++  L   N  
Sbjct: 88  IAEIDSSTQQNNVDNKE-------AQLRIYEAQLESAKVALDISKTQYEREKGLFAKNAT 140

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +      N        L++ +        +L+  +       I++P  GTIV  Q   
Sbjct: 141 SKQEFETAKNTYASNEAKLKEIKAQINQTNIELSTAKIDLGYTRIVAPRDGTIVSVQV-E 199

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                  +Q    IV  + L+ ++ K  +    I  +K G           + + +    
Sbjct: 200 EGQTVNSNQTTPTIVNIADLSKVKMKMQIAEGDITKIKVGTPVEYSILSEPNTKFQT--- 256

Query: 366 IIEKIDP 372
            +  IDP
Sbjct: 257 EVSSIDP 263


>gi|312958255|ref|ZP_07772777.1| putative membrain protein [Pseudomonas fluorescens WH6]
 gi|311287521|gb|EFQ66080.1| putative membrain protein [Pseudomonas fluorescens WH6]
          Length = 296

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/230 (11%), Positives = 73/230 (31%), Gaps = 22/230 (9%)

Query: 207 EKNAVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           +   VS+  +       + +  + ++   L +         R         NL  +  L+
Sbjct: 65  DNQLVSKGQVLFAVDHDRFKLALRQAQAALADRQETLAQAQREYKRNRGLGNLVPSEQLE 124

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E    + + Q   A+    +   +   ++  I SP+ G +      +   +     P++ 
Sbjct: 125 ESQSRVARAQSALAEAQVTVDSAQLNLDRSVIRSPVDGYVNDRAPRTQ-EFVTAGHPVLS 183

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--------- 371
           +V  S   +I       ++  ++ G    +R            ++I+  I+         
Sbjct: 184 VV-DSNSFHIDGYFEETKLDGIRVGMGVDIRVIGDNARLHGHVQSIVAGIEDRDRSSGSN 242

Query: 372 --PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             P ++   + ++  +   V +   ++     +  +  G  A V      
Sbjct: 243 LLPNVNPAFSWVRLAQRIPVRIAFDEV---PADFRMIAGRTATVSIIGDK 289



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/173 (10%), Positives = 59/173 (34%), Gaps = 23/173 (13%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW--------SILLPIEISVSSSGEILNEDNVVEIK 60
           +K+      + +  L I+    ++ W        +     +  + +        ++V+I 
Sbjct: 1   MKKPFLTIGRVVLTLLIVSFAVVVVWRMVMYYMFAPWTR-DGHIRA--------DIVQIA 51

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG+I++  V +   + +G  L   +       +   + ++ + +  +   +      
Sbjct: 52  PDVSGLIQRVDVHDNQLVSKGQVLFAVDHDRFKLALRQAQAALADRQETLAQAQREYKRN 111

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
               +++        EQL +   +     S +    ++     L +  + +RS
Sbjct: 112 RGLGNLVPS------EQLEESQSRVARAQSALAEAQVTVDSAQLNLDRSVIRS 158


>gi|239994390|ref|ZP_04714914.1| HlyD family secretion protein [Alteromonas macleodii ATCC 27126]
          Length = 349

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 64/202 (31%), Gaps = 29/202 (14%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           EL+ NI E K     I++L                + L++ Q       ++L I      
Sbjct: 109 ELKANIDEAKRQFTRISDLRQSNATS--------EQLLDEQQARVKALQAQLDIALAQLN 160

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY-IRAKVTPKQIQHVKKGYT 347
              I +P +G  + N+  S  +  Q    +  +         +   +    +  V KG  
Sbjct: 161 DLQIRAPFSGL-LGNREISIGSLVQPGDTITTL--DDISLIKVDFSIAENHLASVAKGQA 217

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            +     Y     ++F   I  ID  +     +        + ++ T     + +  LR 
Sbjct: 218 LSASSVAYP---GEEFTGKISNIDTRLDPISRS--------IRVRAT---IDNQDNRLRP 263

Query: 408 GFPAEVLFTAKNTTLAQEIIHP 429
           G    V+       +   ++ P
Sbjct: 264 GMLLTVIV---EKRVLNTLVLP 282


>gi|325689952|gb|EGD31956.1| ABC superfamily ATP binding cassette transporter family protein
           [Streptococcus sanguinis SK115]
          Length = 421

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 58/150 (38%), Gaps = 10/150 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG ++  ++      P  G +K+  V+NG  + QG PL              ++++ ++ 
Sbjct: 67  SGAVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYATEQQLTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +    ++ + +    N   +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQSKANGITAAQNSAAIKWETYNRKLASLNALKDKYNSSQDESLLEQIKSAEDELAQ 178

Query: 167 KLTRMRSI--YLNRLDLENKSSLLRALLSS 194
            L+  ++    +    +E + + + A   S
Sbjct: 179 ALSDAKTADNEVTTAQIEAEKAQVTAQTES 208


>gi|300920105|ref|ZP_07136559.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 115-1]
 gi|300412870|gb|EFJ96180.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 115-1]
          Length = 378

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 97/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R + +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQILSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPSTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 347


>gi|150397574|ref|YP_001328041.1| RND family efflux transporter MFP subunit [Sinorhizobium medicae
           WSM419]
 gi|150029089|gb|ABR61206.1| efflux transporter, RND family, MFP subunit [Sinorhizobium medicae
           WSM419]
          Length = 395

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 73/262 (27%), Gaps = 34/262 (12%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V     M      ++ L R  LE   +   A L+     L  +    E+     N   Q 
Sbjct: 88  VEEGSTMASLNQDALLLQRSQLEANLAKAEASLAQLHAQLAEVTANSEEATRVANRAVQL 147

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                 ST E              +       ++  A+                    ++
Sbjct: 148 SENGTVSTAEADRLKALAAAGRARVRSAEQSVSVATADIKV---------------VKTQ 192

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ-QSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +  ++    +  + +P++G +    +      A    +PL  I+       + A +    
Sbjct: 193 IDDVDLRLARTAVKAPVSGIVSRKNA-KVGAIASGSGEPLFAII-RDGEIEMTADIAESD 250

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           +  +  G  ATV+               I  I P +  Q           V + + D + 
Sbjct: 251 VIKLAVGQPATVKLAG----STTTIDGKIRLIAPTVDPQTRLGT------VHISLNDPSK 300

Query: 399 SDNNIELRNGFPAEVLFTAKNT 420
           +      R G  A  +  A+  
Sbjct: 301 A------RAGMYASAVIVAEQK 316


>gi|37677160|ref|NP_937556.1| membrane-fusion protein [Vibrio vulnificus YJ016]
 gi|37201705|dbj|BAC97526.1| membrane-fusion protein [Vibrio vulnificus YJ016]
          Length = 383

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS   GI+ +   + G ++ QG PL+      T   +   
Sbjct: 47  IEKQAVAVGKIVPA-HSVSIKSQIDGIVGEIYAKVGEKVTQGQPLIKVRPNPTPQALTDA 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
             ++  +R   D E +     N +  V +       ++ +       S  + V     + 
Sbjct: 106 SAAL--MRSEADFESAKQKLTNLESLVKQNIIPKNYDEYVSARSTVKSAQADVLQKRQNL 163

Query: 159 SVYRSLKMKLTRMR-----------SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLF 206
            + RS +  +   R           ++   ++++ E   S   +  ++    L  M NL 
Sbjct: 164 ELIRSGEASIGDARLTSTIYAPIDGTVLNQKVEVGEPIISTQSSQAATEMMSLADMNNLI 223

Query: 207 EKNAVSQNDLNQQ 219
            K +VS++D  Q 
Sbjct: 224 FKGSVSEHDAAQL 236



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 56/179 (31%), Gaps = 16/179 (8%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S  +      +  N+   + +     N    +   + +K    D+ Q ++
Sbjct: 102 LTDASAALMRSEADFESAKQKLTNLESLVKQNIIPKNYDEYVSARSTVKSAQADVLQKRQ 161

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHS 325
                 S    +   R   TI +PI GT++  +              Q +  +M +    
Sbjct: 162 NLELIRSGEASIGDARLTSTIYAPIDGTVLNQKV-EVGEPIISTQSSQAATEMMSLA-DM 219

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                +  V+      +  G    +    Y D+       ++ K+  I S+  N+    
Sbjct: 220 NNLIFKGSVSEHDAAQLSPGMPVLLTVAPYPDV---AISGVLTKV-AIQSENLNSPGGN 274


>gi|322690090|ref|YP_004209824.1| ABC transporter permease [Bifidobacterium longum subsp. infantis
           157F]
 gi|320461426|dbj|BAJ72046.1| ABC transporter permease component [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 1227

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 76/226 (33%), Gaps = 26/226 (11%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E    ++  K  + + R  +D  ++ L     K +      +    Q+   L       +
Sbjct: 400 EARTQLESGKAQLTSARKQLDAAQTELTANRTKIEQGITQIDQGVAQIDQMLSMIQQADN 459

Query: 151 KVFN------------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH-QK 197
            +                I  +   L + L  + SI   R  L  K + L+    S  Q+
Sbjct: 460 LLAQLDPNIDFNSPTWQAIKQLLARLGITLPEVPSISELRQQLAAKQTELQTQRDSLTQQ 519

Query: 198 DLTMMKNLFEKNAVSQNDLNQQ-------ERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + + L E  A +Q+ L+QQ       E+       +L     E +     +     +
Sbjct: 520 KADLQRTLNETIAPAQSTLDQQNAQLTAKEQEAAAGEAQLNTKSAELEANAATLETQSAQ 579

Query: 251 ANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              + A        L+E  R LE+ ++  AD  +KL   +   + K
Sbjct: 580 LEAQAAQLASGKQQLEEGERQLEEGEQQLADGKAKLDDAQSELDAK 625



 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 18/176 (10%), Positives = 55/176 (31%), Gaps = 20/176 (11%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +E++    R      Q   +  + L +    +   L++ ++ +  +  EL  N    ++ 
Sbjct: 300 IEHQIQATRQKARRQQIVSSAQRKLDDAKDEANEQLDEAQKQIDDNWAELEANKTTLQDS 359

Query: 241 LRHI----------NELYDEANLEFANYLKEI---SRDLEQNQRTFADEMSKLTILEKTR 287
              +               +   + A+  ++I    + + + +       ++LT   K  
Sbjct: 360 RTELENNRTTITDGERQLADGRAQIASARQQIAQGRQQIAEARTQLESGKAQLTSARKQL 419

Query: 288 E--QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +  Q  + +                   Q   ++ ++  +      A++ P  I  
Sbjct: 420 DAAQTELTANRTKIEQGITQIDQG--VAQIDQMLSMIQQADNLL--AQLDP-NIDF 470


>gi|269104892|ref|ZP_06157588.1| probable Co/Zn/Cd efflux system membrane fusion protein
           [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268161532|gb|EEZ40029.1| probable Co/Zn/Cd efflux system membrane fusion protein
           [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 368

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 68/196 (34%), Gaps = 24/196 (12%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLP-----IEISVSSSGE------- 49
           H     NLK +  A    ++ L I G     + ++L P     +   V +  +       
Sbjct: 6   HISALTNLKVSTLAVSLALSSLVITGCGSEESTAVLPPAVKPALSEVVKAHADDELSFNG 65

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           ++      ++     G +    V+ G Q+ QG  L   +D +     +  ++ +KN R  
Sbjct: 66  VVRSAQRADLAFRIGGRLTYIFVKEGDQVKQGQLLAKLDDRDAQTAFESAQLELKNARAE 125

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
               K+          + EK+    +  L     +++   +++        Y  LK    
Sbjct: 126 YQRGKA----------IFEKSQAIAKSNLDTLTTRFNLAQNRLEEAKRQLEYTQLKAPFD 175

Query: 170 RM--RSIYLNRLDLEN 183
            +  R +  N + ++ 
Sbjct: 176 GIVGRKMVDNHVQVQA 191


>gi|260889299|ref|ZP_05900562.1| auxiliary transport protein, membrane fusion protein [Leptotrichia
           hofstadii F0254]
 gi|260860710|gb|EEX75210.1| auxiliary transport protein, membrane fusion protein [Leptotrichia
           hofstadii F0254]
          Length = 451

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/260 (11%), Positives = 82/260 (31%), Gaps = 41/260 (15%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           N  +  +           R++   +  L  K       +    +DL   + L++    ++
Sbjct: 115 NETLRKIQMKNLEIKKYERNLVDAQGSLRRKKESKSLEIQQKSRDLYNAEELYKVGGETR 174

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +++   + +  S L+L     EQK  +                  ++    L+  +   
Sbjct: 175 VNVDNARKDLRNSRLDLDTVDSEQKASI------------------EDARTSLKTAKLEL 216

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYN------QSFSSSNYAQQSQPLMKIVPHSKL 327
           A     L++++       I SP+ G I         +  +        +  +  V  S  
Sbjct: 217 ATLQEDLSLIKD-----EITSPVDGVITEMTADENYRVNT--------ETTLFKVSDSTN 263

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +   ++  ++++++ G    +      D    K +  + +I  +  +     ++    
Sbjct: 264 MRVEVSLSDNEVKNIQVGQRVEITSDSLPDGE--KIEGSVLQISGVAEKSSTLDESNT-- 319

Query: 388 EVILKITDLAFSDNNIELRN 407
            V ++I +         +  
Sbjct: 320 TVKIQINETKGLKPGATITA 339



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 64/167 (38%), Gaps = 3/167 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I +SVS +G++   DN V + +  S  + K   + G  + +G  +LTF  ++  + +   
Sbjct: 63  ISLSVSKNGQV-VSDNAVSVFTTSSQRVNKVFFKKGDNVKKGDVVLTFYPVDKNETLRKI 121

Query: 100 KVSIKNLR--CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           ++    ++       +         +   LE   +SR+    + L K         +   
Sbjct: 122 QMKNLEIKKYERNLVDAQGSLRRKKESKSLEIQQKSRDLYNAEELYKVGGETRVNVDNAR 181

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +  S     T       +  D        +  L++ Q+DL+++K+
Sbjct: 182 KDLRNSRLDLDTVDSEQKASIEDARTSLKTAKLELATLQEDLSLIKD 228


>gi|255037184|ref|YP_003087805.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
 gi|254949940|gb|ACT94640.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
          Length = 376

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 65/186 (34%), Gaps = 19/186 (10%)

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L E+I E K  L   N L+ E      +          Q +        KL  L     Q
Sbjct: 130 LVESIEELKTSLSLANTLF-EKQKNLWDQKIGTELQYLQAKNNKESLEKKLATLNTQLAQ 188

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I+SP+AG +V   +      A     ++++V       + AKV+      VK+G    
Sbjct: 189 TNIVSPMAG-VVDMVNVKVGEMASPGVGVVRVVNLGN-LKVSAKVSDVYAASVKRGDEVI 246

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           ++FP       K++KA +  +   +         +            A   ++ +++   
Sbjct: 247 IKFPDLK----KEYKARLTFVSTAVDPLSRTFTIE------------ANLPSDRDIKPNM 290

Query: 410 PAEVLF 415
            A+V  
Sbjct: 291 MAQVQI 296



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            G +  ++NV  +     G I    V+ G  +  GT +   ++    + I+  K S+
Sbjct: 86  QGTVDAKNNV-MVTPKTGGAIVAMYVKEGDAVKAGTVIGKIDNSILVESIEELKTSL 141


>gi|238893535|ref|YP_002918269.1| putative secretion protein HlyD [Klebsiella pneumoniae NTUH-K2044]
 gi|238545851|dbj|BAH62202.1| putative secretion protein HlyD [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 380

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 86/296 (29%), Gaps = 48/296 (16%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           ++   +  Q+L       +     F   +  +   +K       S+       + + S  
Sbjct: 75  QSVPVKPNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSLNAALSQAQAELSRA 134

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A     +++    +    + A S   ++ + +        +                  
Sbjct: 135 VAQRDQSRREYARYRKGHAQGAFSDQMVDTRLQTWKADEASVSA---------------- 178

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A  +       +   ++    T A  +++L   +   E   + +P  G +      + 
Sbjct: 179 --AQAKVVQARNALDSVVKGKNTTVASLLAQLQKAQFQLENTVVRAPEDGYV-----STV 231

Query: 309 SNYAQQSQ--------PLMKIVPHSKLTYIR--AKVTPKQIQHVKKGYTATVRFPHYADI 358
               +           PLM  VP          A      +Q + KG  A + FP     
Sbjct: 232 G--LRPGTMSTALGMIPLMTFVPVEGAASREYVAAFRQNALQRLHKGEPAELMFPAIPGT 289

Query: 359 REKKFKAIIEKIDPIISQ----------QDNNLQTQEYYEVILKITDLAFSDNNIE 404
               F+  +  + P I +            + L T     V+LK+TD  F++  + 
Sbjct: 290 ---VFRGEVADVLPAIGESQFQGQGKLLTTDALNTHGRALVVLKVTDPRFAEYALP 342



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 51/173 (29%), Gaps = 10/173 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LR 107
             V I S   G ++   V+    + +G  L T +       +D  +  IK        L 
Sbjct: 62  RTVPIVSQVRGRVQSVPVKPNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSLN 121

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
             +   ++ L     + D   + +    +      F  +   T  + +    +SV  +  
Sbjct: 122 AALSQAQAELSRAVAQRDQSRREYARYRKGHAQGAFSDQMVDTRLQTWKADEASVSAAQA 181

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLN 217
             +    ++           + L A L   Q  L        E   VS   L 
Sbjct: 182 KVVQARNALDSVVKGKNTTVASLLAQLQKAQFQLENTVVRAPEDGYVSTVGLR 234


>gi|225378556|ref|ZP_03755777.1| hypothetical protein ROSEINA2194_04224 [Roseburia inulinivorans DSM
           16841]
 gi|225209604|gb|EEG91958.1| hypothetical protein ROSEINA2194_04224 [Roseburia inulinivorans DSM
           16841]
          Length = 592

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 95/276 (34%), Gaps = 17/276 (6%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTE------KSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +   + +    +    +  +D E      + +L    + Y  ++ A+++  E L      
Sbjct: 185 QIDAVSNSTADTTAEEKAVLDAEKKNSEAQDSLTSAESAYTPVKSAYDTALESLQRAQAD 244

Query: 145 YHST--CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                      N   S+     +   T + +  +     ++     +A L+  Q      
Sbjct: 245 LEEAKATRDALNASSSATAADKQTAETAVATAQVKVNTADSNFKTCQANLNKVQGSYDSA 304

Query: 203 KNLF--EKNAVSQNDLN----QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           K+     KNA+S  + N    +           L+  ++     L   N     A  +  
Sbjct: 305 KSAATDSKNALSNANYNLSVKKLTGTNTAEANNLQAQLNTATVALTDANTALTSATNDQK 364

Query: 257 NYLKEISRD--LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
               +IS +  +    +T  D   ++  L+       I SPI+GT+      ++      
Sbjct: 365 KVTDKISGEVTIASAYKTMTDLQEEVAKLQAKSIGTEITSPISGTVTDIAV-TAGTTVNA 423

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +  +M I P +K   ++  VT  Q + V+ G TA +
Sbjct: 424 NDVMMTIQPENKAYVLQFSVTENQAKKVRVGDTAEI 459



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 78/267 (29%), Gaps = 16/267 (5%)

Query: 38  LPIEISVSSSGEILNE-DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
             I   V  SG +       V I+   +  I    V+  +++  G  L T ED ++ D +
Sbjct: 56  GQITSKVRGSGSVEASESYSVTIE--ETRKIATVNVKKDAEVATGDLLFTLEDTDS-DEL 112

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN-- 154
           D  K S+   +   ++          +   +E    S   Q  + +   +          
Sbjct: 113 DAAKKSLNEAQAAYESAVLTAGITVAERQSIEAGKGSSLTQKQNEIAAANQRVKDAQAAV 172

Query: 155 -------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                    I +   ++        +     LD E K+S  +  L+S +   T +K+ ++
Sbjct: 173 DAAQASVDKIKAQIDAVSNSTADTTAEEKAVLDAEKKNSEAQDSLTSAESAYTPVKSAYD 232

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI---SR 264
               S             +   L  +        +        A ++             
Sbjct: 233 TALESLQRAQADLEEAKATRDALNASSSATAADKQTAETAVATAQVKVNTADSNFKTCQA 292

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKT 291
           +L + Q ++    S  T  +       
Sbjct: 293 NLNKVQGSYDSAKSAATDSKNALSNAN 319


>gi|333005300|gb|EGK24820.1| hypothetical protein SFVA6_2019 [Shigella flexneri VA-6]
          Length = 295

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 61/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE--------F 255
           N+ +   V+  +L            EL     +       + +  +EAN          F
Sbjct: 59  NIKDNQLVNAGELLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIF 117

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 118 AEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 176

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 177 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 227

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 228 RAIYDQS 234



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSMKTIKYFSTIIVAIVAVLAGWWLWNYYMQ--SPWTRDGKIHAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGELLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 117 FAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 156


>gi|323965747|gb|EGB61199.1| efflux pump membrane protein [Escherichia coli M863]
 gi|323975280|gb|EGB70383.1| efflux pump membrane protein [Escherichia coli TW10509]
 gi|327250432|gb|EGE62145.1| multidrug resistance protein mdtN [Escherichia coli STEC_7v]
          Length = 343

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 87/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQASDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F   ++ I   +   D  L
Sbjct: 277 FAGKVDSIGYGVLPDDGGL 295



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQASDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|260870328|ref|YP_003236730.1| hypothetical protein ECO111_4418 [Escherichia coli O111:H- str.
           11128]
 gi|257766684|dbj|BAI38179.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|323179435|gb|EFZ65002.1| hlyD family secretion family protein [Escherichia coli 1180]
          Length = 378

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYITQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 347


>gi|254445508|ref|ZP_05058984.1| efflux transporter, RND family, MFP subunit, putative
           [Verrucomicrobiae bacterium DG1235]
 gi|198259816|gb|EDY84124.1| efflux transporter, RND family, MFP subunit, putative
           [Verrucomicrobiae bacterium DG1235]
          Length = 531

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 21/215 (9%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +   +S        +  +     L++     +         Y +A L  +N  + +   
Sbjct: 258 AKSAYLSAVVELDIRKQSFDRETRLQKQSVTSEKERLEAQANYRKAQLAVSNLRQRLI-- 315

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
              N     DE++++   + T  Q  + +P +GT+V  +S       +   PL  +   S
Sbjct: 316 ---NLGLEIDEIARVENEQDTSAQLIVCAPFSGTLVDRKSV-MGEAVEAGHPLFTLADLS 371

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
                   V    +  ++ G         + ++   +    I  +D  I      +    
Sbjct: 372 TRWL-EISVPSDHVGQLQVGQPVE---AAFPELPGARITGRITWVDTSIDPDTRMI---- 423

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                  IT+ A      +L +G   ++       
Sbjct: 424 --RARALITENA-----EQLTSGLFGKIYIATGQK 451



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 9/125 (7%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           ++     G+I+    + G  +  G PL+     E        K +  +    +D  K + 
Sbjct: 221 KVTPLVGGVIRLVHKDVGEIVEAGEPLVELHSAEVAA----AKSAYLSAVVELDIRKQSF 276

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK-MKLTRMRSIYL 176
           D    +   L+K   + E++ L+    Y      V N     +   L+  ++ R+ +   
Sbjct: 277 D----RETRLQKQSVTSEKERLEAQANYRKAQLAVSNLRQRLINLGLEIDEIARVENEQD 332

Query: 177 NRLDL 181
               L
Sbjct: 333 TSAQL 337


>gi|88860742|ref|ZP_01135379.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           tunicata D2]
 gi|88817337|gb|EAR27155.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           tunicata D2]
          Length = 398

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 71/234 (30%), Gaps = 27/234 (11%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMK-LTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           D + K  +   +     +      L  + L +   +  + L+++ + S L++ L  +   
Sbjct: 91  DPVAKLANPQLESERATLQIEANILAAEFLGKQLDLENSDLNMQQQLSDLKSELRLNTMK 150

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L    +L  K  +SQ DL                         + +    +     + ++
Sbjct: 151 LEAETSLAHKGIISQYDL------------------ARVTEKRQQLQFKVENEAQRYHSF 192

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           ++     ++  +       SKL    +      I + ++G +      +     Q    +
Sbjct: 193 IRNKEAQMQAQKAKKEGVSSKLQAKTEQVNNLLITAKMSGVVQSIDL-TLGQTIQLGDEI 251

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             I       + +  V    I  V       +       I E   KA ++ I P
Sbjct: 252 AVIAKM-SPLHAKISVAQNIIAQVFPDMPVDI------FIGEHIVKAKVDAISP 298



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 72/215 (33%), Gaps = 22/215 (10%)

Query: 44  VSSSGEILNEDNVVEIKSPFS----GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + ++G I+        +   S    G +++  V  G  +  G P+    + +        
Sbjct: 54  IVATGTIIP-----LHQHWLSAKSVGQVEQVFVNAGDNVNIGDPVAKLANPQLES----- 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
               +     I+    A +FL  + D LE +  + ++QL D   +      K+      +
Sbjct: 104 ----ERATLQIEANILAAEFLGKQLD-LENSDLNMQQQLSDLKSELRLNTMKLEAETSLA 158

Query: 160 VYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
               +        +    +L   +EN++    + + + +  +   K   ++   S+    
Sbjct: 159 HKGIISQYDLARVTEKRQQLQFKVENEAQRYHSFIRNKEAQMQAQKA-KKEGVSSKLQAK 217

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            ++      T ++   +      L    +L DE  
Sbjct: 218 TEQVNNLLITAKMSGVVQSIDLTLGQTIQLGDEIA 252


>gi|84515858|ref|ZP_01003219.1| efflux transporter, RND family, MFP subunit [Loktanella
           vestfoldensis SKA53]
 gi|84510300|gb|EAQ06756.1| efflux transporter, RND family, MFP subunit [Loktanella
           vestfoldensis SKA53]
          Length = 381

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 64/202 (31%), Gaps = 14/202 (6%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           AVS+ DL    + + +    + E    Q        +   +  L   +        + Q 
Sbjct: 105 AVSRGDLVSAGQEIARIDASIAEAQLLQAQTQLAQAQRDYDNALALQDRGIATEDRVSQA 164

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   A   + +T  +   +   + +P AG +      +     +    L +++  +    
Sbjct: 165 RAARAAAEAAVTSAQDQLDNTIVTAPFAGRLNDLTVNT-GESVENGMVLAEVL-DNDPLT 222

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +  +V  + +  ++ G  A V F     I  ++    I  I     +Q         + V
Sbjct: 223 VVVQVPQQALSRLQTGQDAQVSF-----ITGEQKAGTIAFIGANADRQTRT------FRV 271

Query: 390 ILKIT-DLAFSDNNIELRNGFP 410
            + +    +     +  R   P
Sbjct: 272 EIIVDNPDSVMPAGLSARVSMP 293


>gi|315608762|ref|ZP_07883740.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|315249612|gb|EFU29623.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 298

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 76/249 (30%), Gaps = 35/249 (14%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           + +   L+            + D+  + +     L+  +++L     L    AV      
Sbjct: 68  TQLTLQLRQTGAARAVYAAQQPDMAAQLAATGEQLAKARRELQRYSELVADGAVP----- 122

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                  K+  + R  +   +  +  +           A           Q         
Sbjct: 123 ------AKTADDARSEVSVLEKRMAALRSTLTVQTATLARQQHTTDTQAAQ--------- 167

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
                L     +  + +P++GT++  +      +    +PL K+   ++  ++RA VT  
Sbjct: 168 -----LRDRLRKCRVKAPLSGTVLE-KYAEPGEFVTVGRPLFKMA-DTQRMFLRAYVTSA 220

Query: 338 QIQHVKKGYTATVRFPH-YADIREKKFKAIIEKIDPIISQQ-----DNNLQTQEYYEVIL 391
           Q+  V+ G  A V+    Y D   + +   +  I             ++ +    Y V +
Sbjct: 221 QLSRVRLG--ARVKVVADYGDGHTRSYNGTVAWISQAGEFTPKTILTDDERADLVYAVKI 278

Query: 392 KITDLAFSD 400
            + +     
Sbjct: 279 ALRNDGLVK 287


>gi|120554263|ref|YP_958614.1| RND family efflux transporter MFP subunit [Marinobacter aquaeolei
           VT8]
 gi|120324112|gb|ABM18427.1| efflux transporter, RND family, MFP subunit [Marinobacter aquaeolei
           VT8]
          Length = 384

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 65/189 (34%), Gaps = 23/189 (12%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------------LPIEISVSSSG 48
           +     A  + +  +  + ++  I ++++                      I+  VS++G
Sbjct: 1   MASATRAGHRWLKWVGFLCVLCAIAFAVVWYARNANGNEPALNTVAVSRGDIQNLVSATG 60

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
            +    N V++ +  SG ++   V  G  +  G  L   +       +D  +  +KN + 
Sbjct: 61  VLEPS-NYVDVGAQVSGQLELIHVRVGQPVSTGDLLAEIDPTVYVAKVDATRAQLKNQQA 119

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            +   K+ L     ++   +  +  RE+       +            ++ +   ++   
Sbjct: 120 QLADRKAQLRLAEIQFQRQQNLW--REDATTRESLQTSEASLASARAQLAMLEAQIEQTS 177

Query: 169 TRMRSIYLN 177
           + +R+   N
Sbjct: 178 STLRAEEAN 186



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 72/219 (32%), Gaps = 19/219 (8%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELR--ENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             K   ++  L  Q+  +     +LR  E   +++  L   +    E+       L    
Sbjct: 104 VAKVDATRAQLKNQQAQLADRKAQLRLAEIQFQRQQNLWREDATTRESLQTSEASLASAR 163

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP---LMK 320
             L   +       S L   E       I +P+ GT+V  ++         SQ    LM+
Sbjct: 164 AQLAMLEAQIEQTSSTLRAEEANLGYARIYAPMDGTVVSIEAR-QGQTLNASQTAPLLMR 222

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           I  +     +RA+V+   +  ++ G    V F    D    K    ++ I+P     +N 
Sbjct: 223 IA-NLSTMRVRAQVSEADVGKLQAGM--RVYFTTLGDAEH-KLYGELQYIEPTPEVTNNV 278

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +     + V          +    L     A+V F  + 
Sbjct: 279 VLYNALFTV---------DNQEGRLLPQMTAQVFFIQEE 308


>gi|332981027|ref|YP_004462468.1| RND family efflux transporter MFP subunit [Mahella australiensis
           50-1 BON]
 gi|332698705|gb|AEE95646.1| efflux transporter, RND family, MFP subunit [Mahella australiensis
           50-1 BON]
          Length = 343

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 73/189 (38%), Gaps = 19/189 (10%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +N + QQE  V K+ L L +N  E + +     + Y     +    + +I  D+   Q  
Sbjct: 104 ENRIKQQELSVKKAKLLLDQNQIELERLKSSGADQYQVDKAKNDVAMAQIDVDMANLQ-- 161

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIR 331
                  L  L   RE+  +L+P+ GT+VY    ++ +     Q L++I  P S      
Sbjct: 162 -------LQGLRIERERAKLLAPVNGTVVYIAKVNAGDPISAYQTLVQIADPSSLQLSYE 214

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
                      + G  ATV+        +    A+   +DP + ++  N     Y EV  
Sbjct: 215 ----TNDASKFQVGMKATVKIDSKDY--QGIVVAMPASVDPELREEMQNKI---YLEVKN 265

Query: 392 KITDLAFSD 400
           +  D+   D
Sbjct: 266 RPADVKMGD 274



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 41/102 (40%), Gaps = 4/102 (3%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL-- 120
            SG +K   V+ G ++ +G  +   +  +  + I  +++S+K  +  +D  +  L+ L  
Sbjct: 74  TSGRLKSINVKLGQEVKKGVVVAELDTGDLENRIKQQELSVKKAKLLLDQNQIELERLKS 133

Query: 121 --NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              ++Y V +   +    Q+   +        ++       +
Sbjct: 134 SGADQYQVDKAKNDVAMAQIDVDMANLQLQGLRIERERAKLL 175


>gi|332085267|gb|EGI90443.1| hlyD family secretion family protein [Shigella boydii 5216-82]
          Length = 355

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|322385212|ref|ZP_08058859.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           cristatus ATCC 51100]
 gi|321270836|gb|EFX53749.1| ABC superfamily ATP binding cassette transporter [Streptococcus
           cristatus ATCC 51100]
          Length = 421

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 76/216 (35%), Gaps = 9/216 (4%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE++  ++      P  G +K+  V+NG  + QG PL           +  ++++ ++ 
Sbjct: 67  SGEVVANNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLF--------SYVTSQELTAQSA 118

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +     + +++        +  + +  +   L     KY+S+  +     I S    L  
Sbjct: 119 QYDAQAKANSITAAQTSASIKWETYNRKLANLNTLKNKYNSSKDESLLDQIKSAEDELAQ 178

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
            L+  ++      + + ++   +   +  + D      +    A +   +N+      K+
Sbjct: 179 ALSDAKTADNEVTNAQIEAEKAQVT-AQTESDRMKYDTVTADTAGTITSMNEDLPTQSKA 237

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             E    I         I     E + E  N  + +
Sbjct: 238 KKEEETFIEIMDKSKTLIKGSVSEFDREKLNVGQRV 273


>gi|23097616|ref|NP_691082.1| hypothetical protein OB0161 [Oceanobacillus iheyensis HTE831]
 gi|22775839|dbj|BAC12117.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 369

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 76/185 (41%), Gaps = 7/185 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +V +SG++   +      +P +G +++  V  G Q+  GTPL+ +E+ +     D  
Sbjct: 45  ITETVMTSGQLKLAEQQTIYYTPENGEVEEILVNEGDQVESGTPLIFYENTQLDLEQDQN 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++ +++    ++  +   + ++   D+L    ++ + Q      K     + +    +  
Sbjct: 105 ELQLQSANLKVNDLRKQHEVID---DLLRDDEKNEQLQAEHDNIKLQEQQAYIEVEQLQL 161

Query: 160 VYRSLKMKLTRMR---SIYLNRLDLENKSSLLRALLSSHQ-KDLTMMKNLFEKNAVSQND 215
              SL+ ++  +     I    L++ ++  +    +       +  +  +  +  +S+ D
Sbjct: 162 QKESLQDQINDLEIKSEIAGKVLEVNDQVVVGSNQMEQQPIIRIGTLDQMIIEGFISEYD 221

Query: 216 LNQQE 220
             + E
Sbjct: 222 SLKIE 226



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 89/278 (32%), Gaps = 20/278 (7%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +  I      L+ +      +   +L L  + ++     +   +++ + +    ++    
Sbjct: 30  DSKIEVEVTQLEEETITETVMTSGQLKLAEQQTIYYTPENGEVEEILVNEGDQVESGTPL 89

Query: 214 NDLNQQERIVYKSTLELRENIHEQK-NMLRHINELYD------EANLEFANYLKEISRDL 266
                 +  + +   EL+      K N LR  +E+ D      E N +       I    
Sbjct: 90  IFYENTQLDLEQDQNELQLQSANLKVNDLRKQHEVIDDLLRDDEKNEQLQAEHDNIKLQE 149

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ-SFSSSNYAQQSQPLMKIVPHS 325
           +Q          +   L+       I S IAG ++         +   + QP+++I    
Sbjct: 150 QQAYIEVEQLQLQKESLQDQINDLEIKSEIAGKVLEVNDQVVVGSNQMEQQPIIRIG-TL 208

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI---ISQQDNNLQ 382
               I   ++      +++G   T+       +  + ++  +  I  +   I     N  
Sbjct: 209 DQMIIEGFISEYDSLKIEEGNPVTL---SSDTVPNQTWEGEVSFISDLPKEIESSGTNGG 265

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               Y + + +     +  NI L+ GF   V  T    
Sbjct: 266 GGVQYPIEITV-----ASENINLKPGFQIIVEITTDER 298


>gi|221195391|ref|ZP_03568446.1| putative ABC export system, membrane fusion protein [Atopobium
           rimae ATCC 49626]
 gi|221184578|gb|EEE16970.1| putative ABC export system, membrane fusion protein [Atopobium
           rimae ATCC 49626]
          Length = 529

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 65/220 (29%), Gaps = 20/220 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   +   E  V K+   L         +     E            ++    +LE  Q 
Sbjct: 196 AAQQVKAAENEVSKAKAALEAARSGVAGVGEDDQENGGANASSVEASVETAQANLESAQI 255

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS-------------SSNYAQQSQPL 318
              +  S         +++T+ +P  GT++   + +             S++ +  S  L
Sbjct: 256 ALEEARSAHNDAVAQADKRTVTAPCDGTVIVMNAVNGASVGSSGGAGAGSNSGSGASGSL 315

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + I        +  ++    I  +     A V F      RE    AI+  +  + S   
Sbjct: 316 ITIA-DLSKMKVNVQINEVDISRIAVEQKAQVTFAAL---RELSCGAIVTHVSTVSSSGG 371

Query: 379 NNLQTQEYYEVILKIT---DLAFSDNNIELRNGFPAEVLF 415
           +             +T   +L   + +  ++ G  A    
Sbjct: 372 DTSGMSYDGRGRAIVTYDVELLIENPDASIKPGMTASADI 411



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 25/193 (12%)

Query: 5   MWKNLKRNHPASLKRMTLLS--IIGIIGLITWSILLPI---------------------- 40
            +++L R+    L++  +     +G++ LI  + +  +                      
Sbjct: 79  AYESLMRHRKIRLRKKFIKVGIALGVVVLIGIAFVARLFQSEKQVEAPTASTAFITRGEF 138

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
             SVS+SG I    +   +     GII+  QV  GS + +G  L T ++ E    +    
Sbjct: 139 SDSVSASGSIKPISST-VVTPEVDGIIQDVQVAEGSVVKKGDKLFTIKNDELDKAVRKAA 197

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K     +   K+AL+   +    + +  +         +     T          ++
Sbjct: 198 QQVKAAENEVSKAKAALEAARSGVAGVGEDDQENGGANASSVEASVETAQANLESAQIAL 257

Query: 161 YRSLKMKLTRMRS 173
             +       +  
Sbjct: 258 EEARSAHNDAVAQ 270


>gi|53714648|ref|YP_100640.1| hypothetical protein BF3362 [Bacteroides fragilis YCH46]
 gi|253565153|ref|ZP_04842609.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|52217513|dbj|BAD50106.1| transmembrane protein precursor possibly involved in transport
           [Bacteroides fragilis YCH46]
 gi|251946618|gb|EES86995.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 355

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 7/99 (7%)

Query: 39  PIEISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
            I+  +++  +  +     V   +        SG I K  V++G+Q+  G  L   +  +
Sbjct: 33  KIDTVIAADKQKFLQFPGRVKAAQDISLSFRVSGTINKIYVKDGAQVRAGQLLAELDPTD 92

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
               +D  +   + ++   +   +         +  +KA
Sbjct: 93  YQVQLDATEAEYRQVKAEAERVMALYKENGTTPNANDKA 131


>gi|134300781|ref|YP_001114277.1| RND family efflux transporter MFP subunit [Desulfotomaculum
           reducens MI-1]
 gi|134053481|gb|ABO51452.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           reducens MI-1]
          Length = 376

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 69/221 (31%), Gaps = 26/221 (11%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRE--------NIHEQKNMLRHINELYDEANLEFANY- 258
           +   ++N ++Q E  +  +   L           I+ ++N + +  +   +   E A   
Sbjct: 92  EGNDARNAMDQAEAGLALAQANLERSQQGLKDSEINFERNKVLYDAQAISKVQFEQAESG 151

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L     +++ ++       + +   ++     T+ SPI GT+                  
Sbjct: 152 LVTAQTNVKVSEAQVKQAQALVNTTQENYNNSTVTSPIDGTVAAVNVD-PGEMVNPQTSP 210

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + +V     T ++  V+   +  +K G    V          K     I  + P      
Sbjct: 211 VTVV-QIDTTKVKVNVSENVVDSIKPGSKVPVTINALN----KTVNGTIFSVAPKADPST 265

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                           ++   + N E++ G  A++  +   
Sbjct: 266 RAFAV-----------EIKLPNKNGEIKPGMVAKLDLSTGK 295



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 53/138 (38%), Gaps = 1/138 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  ++S++GE++   +V  +    +G ++K  V+ G  + +G  L   E  +  + +D  
Sbjct: 45  LAHTLSTTGEVIAGADV-NVMPKATGRVQKVLVKVGDNVHKGQVLFQLEGNDARNAMDQA 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +   + +++  +  L      ++  +  ++++    + F        +   N  +S 
Sbjct: 104 EAGLALAQANLERSQQGLKDSEINFERNKVLYDAQAISKVQFEQAESGLVTAQTNVKVSE 163

Query: 160 VYRSLKMKLTRMRSIYLN 177
                   L        N
Sbjct: 164 AQVKQAQALVNTTQENYN 181


>gi|332345567|gb|AEE58901.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 378

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 347


>gi|242239843|ref|YP_002988024.1| hypothetical protein Dd703_2420 [Dickeya dadantii Ech703]
 gi|242131900|gb|ACS86202.1| secretion protein HlyD family protein [Dickeya dadantii Ech703]
          Length = 334

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 89/279 (31%), Gaps = 17/279 (6%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ-KDL 199
            L   +         G +            +R    N    +++ +LLR    S + + +
Sbjct: 54  RLATLNVDEGDAIQPGQALAQLDDAPYRNALRQAQANVASAQSQLALLREGYRSEEIEQV 113

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                  +      N   Q++  +++        + + K          + A  +F+ Y 
Sbjct: 114 RSQMAQAQAAYDYANRFYQRQLGLWQQRTVAANTLEDAKATRDQALATLNAAKEKFSQYQ 173

Query: 260 KEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           +    +++   + + A   +     E   +   + +P AG I+  ++  + +       +
Sbjct: 174 RGNRPQEIAAAEASLAQTQAAEAQAELNLQDTALHAPSAGVILT-RAAEAGSMLSAGGTV 232

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS--- 375
             +   +   +IRA V+ K +     G    + F          +   I  + P      
Sbjct: 233 FTLS-LTHPVWIRAYVSEKNLGRTAPGSEVLI-FT--DGRPAHPYHGKIGFVSPSAEFTP 288

Query: 376 --QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              + ++L+T   Y + + + D         LR G P  
Sbjct: 289 KNVETDDLRTDLVYRLRIIVGDADDG-----LRQGMPVT 322


>gi|153010691|ref|YP_001371905.1| polysaccharide export protein [Ochrobactrum anthropi ATCC 49188]
 gi|151562579|gb|ABS16076.1| polysaccharide export protein [Ochrobactrum anthropi ATCC 49188]
          Length = 415

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 12/199 (6%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + ++  ++   R   + E +  DF     D          ++ +    K       VFN
Sbjct: 166 DLQMQITAMAIRRARFEAELNGTDFTYTLPDQAAA-----NKETVALTQKMLDGEKTVFN 220

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              +++    +    +  S       L+    L    +   Q+++   K+L ++   +++
Sbjct: 221 VRRNNLAAERRALEAQAASYGDEIQTLQQSIKLHDTEIGLLQENVDSSKSLVDRGLAAKS 280

Query: 215 DLNQQERIVY---KSTLELRENIHEQKN----MLRHINELYDEANLEFANYLKEISRDLE 267
           +L   ER +    ++ LEL   +   +     M + I  L +    E A  L++I  ++ 
Sbjct: 281 NLRDMERDLSATRRAALELASFLARARQNQLAMEQRIANLEEIRKSEAATNLQDIDLNIA 340

Query: 268 QNQRTFADEMSKLTILEKT 286
           + +R    ++  +  + K+
Sbjct: 341 RMERRSNTQLQAMAEIAKS 359


>gi|320193898|gb|EFW68531.1| Multidrug resistance protein A [Escherichia coli WV_060327]
          Length = 378

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTSQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNADIDALPDGIYAQV 347


>gi|307609045|emb|CBW98476.1| hypothetical protein LPW_03131 [Legionella pneumophila 130b]
          Length = 328

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 13/171 (7%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT--- 272
           L++ E       L +            +++           +  +     +E  +     
Sbjct: 96  LSRLEVEKKAILLRIEAAKQAIAAGKANVDRQKKLYEQGINSRRQYELAQIEYAKYQNDL 155

Query: 273 FADEMSKLTILEKTREQKT--ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               + K+ +  +   QKT  I + +AG I    +   S        L +I+P ++   +
Sbjct: 156 AQANIDKVNVDVRIARQKTQIIKAHVAGIIFRRLTGQESVVVNAGDVLAQILPETESRAV 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPI 373
              V    I  V+    A ++F  +  I+           F   +  IDP 
Sbjct: 216 ELWVDGNDIPFVRLNQKARLQFEGWPAIQFRGWPEIAVGTFGGTVSFIDPT 266



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 61/152 (40%), Gaps = 7/152 (4%)

Query: 36  ILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
              P +     +G+++     +    + SP SG IKK+ V+ G ++  G P++   D + 
Sbjct: 34  SFTPWQQFALGNGKVIAFSPTERQHTVNSPVSGRIKKWYVDEGMRVKPGDPIVDITDNDP 93

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE---SREEQLLDFLGKYHSTC 149
            +L+   +V  K +   I+  K A+       D  +K +E   +   Q      +Y    
Sbjct: 94  -ELLSRLEVEKKAILLRIEAAKQAIAAGKANVDRQKKLYEQGINSRRQYELAQIEYAKYQ 152

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           + +    I  V   +++   + + I  +   +
Sbjct: 153 NDLAQANIDKVNVDVRIARQKTQIIKAHVAGI 184


>gi|289522130|ref|ZP_06438984.1| putative secretion protein HlyD [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289503966|gb|EFD25130.1| putative secretion protein HlyD [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 384

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 78/251 (31%), Gaps = 53/251 (21%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            ++              S  ++ L + +KD    KNL+E+  +S+  L+Q E        
Sbjct: 110 RQIEEAKAAVAAARAAISQAKSQLQTTEKDYVRYKNLYEEQVISRQQLDQIEGQYEVEKA 169

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +                                    LEQ QR      ++L  L+  RE
Sbjct: 170 K------------------------------------LEQAQRQLDQAQAQLRQLQIMRE 193

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             +I+SP+ G I   +     +           V   +   I   VT      +K G  A
Sbjct: 194 YHSIVSPVDGVIAE-RHIDPGDTVSVGSTCFT-VSRQETVKIIGTVTENDYPRIKLGQVA 251

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            V+   + ++    F+A + +I P++             EV + ++          L+ G
Sbjct: 252 LVKVDAFPNMT---FEAEVVRISPMLDSVTRTG------EVEVWLSSEGI------LKPG 296

Query: 409 FPAEVLFTAKN 419
             A        
Sbjct: 297 MFARTEVIVGK 307



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 3/95 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +  V+ GS++ +G PL   +D      I+  K ++   R  I   KS L      Y  
Sbjct: 83  VLEVYVDVGSELKKGDPLAKLDDSLVNRQIEEAKAAVAAARAAISQAKSQLQTTEKDYVR 142

Query: 127 LEKAFESR---EEQLLDFLGKYHSTCSKVFNYGIS 158
            +  +E +    +QL    G+Y    +K+      
Sbjct: 143 YKNLYEEQVISRQQLDQIEGQYEVEKAKLEQAQRQ 177


>gi|218697318|ref|YP_002404985.1| hypothetical protein EC55989_4061 [Escherichia coli 55989]
 gi|218354050|emb|CAV00575.1| conserved hypothetical protein [Escherichia coli 55989]
          Length = 378

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 347


>gi|153806775|ref|ZP_01959443.1| hypothetical protein BACCAC_01047 [Bacteroides caccae ATCC 43185]
 gi|149131452|gb|EDM22658.1| hypothetical protein BACCAC_01047 [Bacteroides caccae ATCC 43185]
          Length = 410

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 73/216 (33%), Gaps = 18/216 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDL 266
             +++ D    +  +            E +   +    ++   E +L      ++   + 
Sbjct: 86  QLIAEMDRVTLQSELASQKATYDGAKAEYEYQEKNFQRSKGLHEKSLISDTDYEQALYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ +  +    + L   E+     TI SPI G ++  +   +            L  I  
Sbjct: 146 QKAKSNYDSSKASLAKAERNLSYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI----DPIISQQDN 379
                 + A V    I  +++G  A+     Y +     F+ ++ +I        S   +
Sbjct: 205 DLTKMQVVADVDEADIGGIEEGQRASFTVDAYPNDT---FEGVVTQIRLGDASSTSSTSS 261

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +  T   YEV++     +  + +++L+    A +  
Sbjct: 262 STSTVVTYEVVI-----SAHNPDLKLKPRLTANITI 292



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 42/105 (40%), Gaps = 1/105 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII K  V+  S + +G  +   + +     +  +
Sbjct: 45  ISNSVTATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSVVTKGQLIAEMDRVTLQSELASQ 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           K +    +   + ++         ++    +    E+ L ++   
Sbjct: 104 KATYDGAKAEYEYQEKNFQRSKGLHEKSLISDTDYEQALYNYQKA 148


>gi|92112350|ref|YP_572278.1| secretion protein HlyD [Chromohalobacter salexigens DSM 3043]
 gi|91795440|gb|ABE57579.1| secretion protein HlyD [Chromohalobacter salexigens DSM 3043]
          Length = 314

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 63/216 (29%), Gaps = 19/216 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + +            +   L +   E K       +L D A+ E  +   +        Q
Sbjct: 80  IDKQRYALALSEARANLNNLEQQRAEAKAANARRQKLGDYASQEDRD---DARFAYSSAQ 136

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                    +   +   E+ T+ +P+ G +          Y    +  + +V  +   ++
Sbjct: 137 AQVEQAEVAVEQAKLDLERATVRAPVDGYVTNLLLR-PGEYVSAGEDAVTLV-DAGSFHV 194

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQDN 379
                  ++  +  G  A ++             +I   I              +S   +
Sbjct: 195 LGYFEETKLDAIDIGAPARIQLLASDTPLWGHVDSIARGISDKSLDSQGTGLANVSTSFD 254

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            ++  +   V + + D+     +I+L  G  A V  
Sbjct: 255 WVRLSQRIPVRIALDDV---PEDIDLAAGLTATVYL 287



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 6/110 (5%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG+++  QVE+   +  G  L T +       +   + ++ NL      E+   +     
Sbjct: 57  SGLVENLQVEDNDFVHAGDVLFTIDKQRYALALSEARANLNNL------EQQRAEAKAAN 110

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
               +    + +E   D    Y S  ++V    ++     L ++   +R+
Sbjct: 111 ARRQKLGDYASQEDRDDARFAYSSAQAQVEQAEVAVEQAKLDLERATVRA 160


>gi|52840480|ref|YP_094279.1| RND efflux membrane fusion protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627591|gb|AAU26332.1| RND efflux membrane fusion protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 328

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 54/171 (31%), Gaps = 13/171 (7%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT--- 272
           L++ E       L +            +++           +  +     +E  +     
Sbjct: 96  LSRLEVEKKAILLRIEAAKQAIAAGKANVDRQKKLYEQGINSRRQYELAQIEYAKYQNDL 155

Query: 273 FADEMSKLTILEKTREQKT--ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               + K+ +  +   QKT  I + +AG I    +   S        L +I+P ++   +
Sbjct: 156 AQANIDKVNVDVRIARQKTQIIKAHVAGIIFRRLTGQESVVVNAGDVLAQILPETESRAV 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDPI 373
              V    I  V+    A ++F  +  I+           F   +  IDP 
Sbjct: 216 ELWVDGNDIPFVRLNQKARLQFEGWPAIQFRGWPEIAVGTFGGTVSFIDPT 266



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 61/152 (40%), Gaps = 7/152 (4%)

Query: 36  ILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
              P +     +G+++     +    + SP SG IKK+ V+ G ++  G P++   D + 
Sbjct: 34  SFTPWQQFALGNGKVIAFSPTERQHTVNSPVSGRIKKWYVDEGMRVKPGDPIVDITDNDP 93

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE---SREEQLLDFLGKYHSTC 149
            +L+   +V  K +   I+  K A+       D  +K +E   +   Q      +Y    
Sbjct: 94  -ELLSRLEVEKKAILLRIEAAKQAIAAGKANVDRQKKLYEQGINSRRQYELAQIEYAKYQ 152

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           + +    I  V   +++   + + I  +   +
Sbjct: 153 NDLAQANIDKVNVDVRIARQKTQIIKAHVAGI 184


>gi|320159248|ref|YP_004191626.1| membrane-fusion protein [Vibrio vulnificus MO6-24/O]
 gi|319934560|gb|ADV89423.1| membrane-fusion protein [Vibrio vulnificus MO6-24/O]
          Length = 378

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS   GI+ +   + G ++ QG PL+      T   +   
Sbjct: 42  IEKQAVAVGKIVPA-HSVSIKSQIDGIVGEIYAKVGEKVTQGQPLIKVRPNPTPQALTDA 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
             ++  +R   D E +     N +  V +       ++ +       S  + V     + 
Sbjct: 101 SAAL--MRSEADFESAKQKLTNLESLVKQNIIPKNYDEYVSARSTVKSAQADVLQKRQNL 158

Query: 159 SVYRSLKMKLTRMR-----------SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLF 206
            + RS +  +   R           ++   ++++ E   S   +  ++    L  M NL 
Sbjct: 159 ELIRSGEASIGDARLTSTIYAPIDGTVLNQKVEVGEPIISTQSSQAATEMMSLADMNNLI 218

Query: 207 EKNAVSQNDLNQQ 219
            K +VS++D  Q 
Sbjct: 219 FKGSVSEHDAAQL 231



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 57/179 (31%), Gaps = 16/179 (8%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S  +      +  N+   + +     N    +   + +K    D+ Q ++
Sbjct: 97  LTDASAALMRSEADFESAKQKLTNLESLVKQNIIPKNYDEYVSARSTVKSAQADVLQKRQ 156

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHS 325
                 S    +   R   TI +PI GT++  +              Q +  +M +    
Sbjct: 157 NLELIRSGEASIGDARLTSTIYAPIDGTVLNQKV-EVGEPIISTQSSQAATEMMSLA-DM 214

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                +  V+      +  G    +    Y D+       ++ K+  I S+  N+ +  
Sbjct: 215 NNLIFKGSVSEHDAAQLSPGMPVMLTVAPYPDV---AISGVLTKV-AIQSENLNSPEGN 269


>gi|241758550|ref|ZP_04756667.1| auxiliary transport protein, membrane fusion protein family
           [Neisseria flavescens SK114]
 gi|241321293|gb|EER57453.1| auxiliary transport protein, membrane fusion protein family
           [Neisseria flavescens SK114]
          Length = 393

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 85/226 (37%), Gaps = 29/226 (12%)

Query: 24  SIIGIIGLITWSILLP---------------IEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++I       WS++ P               I  +VS++GEI    N+V + +  SG IK
Sbjct: 12  AVIVAAVFGGWSLMKPEPQSSFITEVVKRGDIRQTVSATGEISPS-NLVSVGAEASGQIK 70

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K  V+ G Q+ +G  +   +     + ++ +K  ++  +  + + + AL     KY    
Sbjct: 71  KLYVKLGQQVKKGDLIAEIDSTNQINTLNTEKSKLETYQAKLVSAEIALSSAEKKYKREL 130

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLD------ 180
             ++ +     D      S  +   N     +S+ +S     T    +   R+       
Sbjct: 131 ALWKEQATSKEDLESAQDSLAAAKANVAELKASIKQSKISINTAESELGHTRITATMDGT 190

Query: 181 -----LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
                +E   S+  A  +     L  ++ +  K  +++ D+ + + 
Sbjct: 191 VVAIPVEEGQSVNAAQSTPTIIQLANLETMLNKMQIAEGDITKVKA 236



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/263 (11%), Positives = 80/263 (30%), Gaps = 31/263 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A + S  +  T+           ++ L   +  
Sbjct: 60  SVGAEASGQIKKLYVKLGQQVKKGDLIAEIDSTNQINTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K  L          E      + L     ++ + + +       +
Sbjct: 112 LVSAEIALSSAEKKYKRELALWKEQATSKEDLESAQDSLAAAKANVAELKASIKQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPK 337
              E       I + + GT+V             +Q    ++++  + +    + ++   
Sbjct: 172 NTAESELGHTRITATMDGTVVAIPV-EEGQSVNAAQSTPTIIQLA-NLETMLNKMQIAEG 229

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEV 389
            I  VK G    + F   ++      KA ++ +DP ++           +      YY  
Sbjct: 230 DITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSLGNYTSSTDTTSNAIYYYA 286

Query: 390 ILKITDLAFSDNNIELRNGFPAE 412
              + +       + +  G   +
Sbjct: 287 RALVPNPE---GKLSI--GMTTQ 304


>gi|56461405|ref|YP_156686.1| HlyD family secretion protein [Idiomarina loihiensis L2TR]
 gi|56180415|gb|AAV83137.1| HlyD family secretion protein [Idiomarina loihiensis L2TR]
          Length = 351

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 69/211 (32%), Gaps = 22/211 (10%)

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +++ EK      DL +Q +++ +    +     +Q        +   E   E       
Sbjct: 75  TQDVVEKIYFESGDLVEQGQLLAELNARIEVARVQQLKFSLDEAKRQLERITELRRGNAA 134

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PL 318
             + L + Q       + L + E T ++  I +P +G +   +  S+ +          L
Sbjct: 135 SQQQLNEQQVRVNGLQADLEVAEATLKEMKIYAPFSGRV-GIREISAGSLVSPGDVFTTL 193

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             I P      +   V  +    +        R   Y     ++F   I  ID  +    
Sbjct: 194 DDIKPIK----VDFSVPERYFASIAVDQEVIARSRAYP---GEQFIGRISSIDSRVDPVT 246

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            ++      +V  KI     ++++  LR G 
Sbjct: 247 RSV------KVRAKI-----NNDDERLRPGM 266


>gi|269967860|ref|ZP_06181904.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269827565|gb|EEZ81855.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 367

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 47/110 (42%), Gaps = 3/110 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFL 120
           SG+I+  + ++G  + +G  L+T +D      +   +  +K+ R  ++    E+     L
Sbjct: 66  SGVIETVEFKDGQSVNKGDLLVTLDDRTFKAQVSRLEAQVKSARAALEQAANEQKRAAQL 125

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             +  +  +  E+R+  +     +  +  +++ +  +   +  +   ++ 
Sbjct: 126 VKRKAISAEQAEARDTAVKQRSAELMALRAQLESAKLDLEFTKIYAPISG 175



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 11/107 (10%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  +++ E  V  +   L +  +EQK   + +      A    A         ++Q    
Sbjct: 95  KAQVSRLEAQVKSARAALEQAANEQKRAAQLVKRKAISAEQAEAR-----DTAVKQRSAE 149

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTI------VYNQSFSSSNYAQ 313
                ++L   +   E   I +PI+GTI        N   ++ +   
Sbjct: 150 LMALRAQLESAKLDLEFTKIYAPISGTISRAFITKGNNVNANQSVIS 196


>gi|221369377|ref|YP_002520473.1| Membrane fusion protein, HlyD family [Rhodobacter sphaeroides
           KD131]
 gi|221162429|gb|ACM03400.1| Membrane fusion protein, HlyD family [Rhodobacter sphaeroides
           KD131]
          Length = 425

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 62/193 (32%), Gaps = 1/193 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + ++V ++G +     V E+ S  SG +    V+   ++  G PL   +D      +   
Sbjct: 67  LVVTVMATGTVQPTTQV-EVSSELSGTLAAVDVDYNDEVAVGQPLARLDDTRLKAQVANA 125

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S++     ++  ++        Y       +      LD +    +         I+ 
Sbjct: 126 EASLEAAEGRLEQARATALEAAENYRSRSALDQRGVAAHLDLVATEAAHKRAESEVKIAE 185

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             R+L      ++ + L +  + +    +    ++    +               DL + 
Sbjct: 186 ADRTLAAANLEVQRVDLAKAVIRSPIRGIVLDRAAEAGQIVASSLNTPVLFTLAEDLTRM 245

Query: 220 ERIVYKSTLELRE 232
           E  V     ++  
Sbjct: 246 ELRVDIDEADIGR 258



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 18/205 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E+    +               R +    D    E A+   E    + +  RT A   
Sbjct: 135 RLEQARATALEAAENYRSRSALDQRGVAAHLDLVATEAAHKRAESEVKIAEADRTLAA-- 192

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHS-KLTYIRAKV 334
           + L +      +  I SPI G ++  ++  +      S   P++  +        +R  +
Sbjct: 193 ANLEVQRVDLAKAVIRSPIRGIVLD-RAAEAGQIVASSLNTPVLFTLAEDLTRMELRVDI 251

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               I  V+ G  A+ +   Y       FKA I ++     +  + + T   Y+ +L + 
Sbjct: 252 DEADIGRVRVGNRASFKVDAYPGR---SFKAEIVQV-RYAPETTDGVVT---YKAVLSVD 304

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
           +         LR G  A    T   
Sbjct: 305 NGERL-----LRPGMTATATITVAE 324


>gi|212219456|ref|YP_002306243.1| periplasmic component of efflux system [Coxiella burnetii
           CbuK_Q154]
 gi|212013718|gb|ACJ21098.1| periplasmic component of efflux system [Coxiella burnetii
           CbuK_Q154]
          Length = 332

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 129/410 (31%), Gaps = 89/410 (21%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R     L R     + G++ L   S   P+ +     G+ +   + V      SG++K
Sbjct: 1   MERIPGMRLIRPIFWLLFGMLLLSGCSKNQPVLLQGYVEGQFIYLSSSV------SGLLK 54

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V  G  + +   L   +        + ++  ++  +  +  EK  L+ L        
Sbjct: 55  SLLVYRGDSVKEDQTLFILDP-------EPQQSELQEAKAKLTQEKENLENL-------- 99

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                         G+  +  +++      ++   +  + T  R  +L R+   +K  L 
Sbjct: 100 ------------VKGQRQTILNRIIAEREQAIADMIYAQQTLTRFQHLYRVRAISKDELD 147

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +A                +K  V+Q + N  E             + E+K+++     + 
Sbjct: 148 KATADYK----------AKKQIVNQTEANLAE-----------AQLGERKHLILAQQAVV 186

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D A    A  + E                          +QKT+++P  G I     F  
Sbjct: 187 DAAQANVAKLIWE-------------------------LDQKTVVAPKNGNIFD-TFFKV 220

Query: 309 SNYAQQSQPL-MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             Y    QP+   + P++        +    +  +K G     +       R     A +
Sbjct: 221 GEYVPAGQPVTALLTPNNIKLIF--YIPEPLLSRLKLGTVVEFKCDGCTMQR-----AKV 273

Query: 368 EKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             I P        + +Q    +++ ++       N ++   G P +V   
Sbjct: 274 TYISPEAEYTPPIIYSQKSRAKLVYRVECAIPEKNALKFHAGQPVDVYLH 323


>gi|194365066|ref|YP_002027676.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194347870|gb|ACF50993.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 392

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 87/269 (32%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + + R +Y +    +   +  +  L   + D    K+L    A+S  +
Sbjct: 96  ALQQAEANLAKTVRQTRGLYRSVEGAQADLNARQVTLKRVRDDFARRKDLAATGAISNEE 155

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   +  +    +     +++       +      ++ +    N      
Sbjct: 156 LAHARDELAAAEAAVAGSRETVERNRALVDDTVIATQPDVQAAAAQLRQAFLNN------ 209

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        +  I++P+ G +   +S       Q    LM +VP  +  ++ A   
Sbjct: 210 ------------ARAGIVAPVTGYVAR-RSVQVGQRVQPGNALMAVVPT-EQMWVEANFK 255

Query: 336 PKQIQHVKKGYTATVRFPHY-ADIRE-------KKFKAIIEKIDPIISQQDNNLQTQEYY 387
             Q++H++ G    ++   Y  D++                 + P  +   N ++  +  
Sbjct: 256 ETQLRHMRLGQEVELKSDLYAGDVKYKGRIDSLGLGTGSAFSLLPAQNASGNWIKIVQRV 315

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + I     +++ + +     AEV   
Sbjct: 316 PVRIAIDAKQLAEHPLRIGLSMKAEVSLR 344



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 49/132 (37%), Gaps = 6/132 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV----SIKNLR 107
            + N V+I    +G +     ++G ++ +G  L+  +  +T+  +   +     +++  R
Sbjct: 53  VQGNQVQITPLVAGTVVAINADDGMRVERGQLLVQLDPSDTSVALQQAEANLAKTVRQTR 112

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
               + + A   LN +   L++  +    +    L    +  ++   +    +  +    
Sbjct: 113 GLYRSVEGAQADLNARQVTLKRVRDDFARR--KDLAATGAISNEELAHARDELAAAEAAV 170

Query: 168 LTRMRSIYLNRL 179
                ++  NR 
Sbjct: 171 AGSRETVERNRA 182


>gi|119468488|ref|ZP_01611579.1| hypothetical protein ATW7_10593 [Alteromonadales bacterium TW-7]
 gi|119447996|gb|EAW29261.1| hypothetical protein ATW7_10593 [Alteromonadales bacterium TW-7]
          Length = 350

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 64/191 (33%), Gaps = 24/191 (12%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANL----EFANYLKEISRDLEQNQRTFADEMSKL 280
           +  ++L+    E       IN   ++  L    E +         LE+         S+L
Sbjct: 95  QKLVQLQSRQEELAVEELSINLQEEKRQLNRLTELSRTQSTAKSLLEEQLSVVDATKSQL 154

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA--KVTPKQ 338
              + T  + TI +P +G  +  +  S   Y   +  L  +     ++ I+   KV  K 
Sbjct: 155 ESAKTTLSEMTIRAPFSGL-LGKREISVGAYVNNATILTTL---DDISIIKVDFKVPEKY 210

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           +  +  G     +   Y       F   +  I   I     +          +++T  +F
Sbjct: 211 LAQLAIGMKVLTQNDAYPGQT---FTGKVTHISSRIDAVTRS----------IEVT-ASF 256

Query: 399 SDNNIELRNGF 409
           ++ +  LR G 
Sbjct: 257 ANKSGLLRPGM 267



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 41/118 (34%), Gaps = 10/118 (8%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +     ++G  + +G  L+             ++++++ L  ++  EK  L+ L      
Sbjct: 80  VTDIFFKDGDLVSKGQKLVQL-------QSRQEELAVEELSINLQEEKRQLNRLTELSRT 132

Query: 127 LEKAFESREEQLL---DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              A    EEQL        +  S  + +    I + +  L  K       Y+N   +
Sbjct: 133 QSTAKSLLEEQLSVVDATKSQLESAKTTLSEMTIRAPFSGLLGKREISVGAYVNNATI 190


>gi|27367400|ref|NP_762927.1| membrane-fusion protein [Vibrio vulnificus CMCP6]
 gi|27358969|gb|AAO07917.1|AE016811_158 Membrane-fusion protein [Vibrio vulnificus CMCP6]
          Length = 378

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS   GI+ +   + G ++ QG PL+      T   +   
Sbjct: 42  IEKQAVAVGKIVPA-HSVSIKSQIDGIVGEIYAKVGEKVTQGQPLIKVRPNPTPQALTDA 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
             ++  +R   D E +     N +  V +       ++ +       S  + V     + 
Sbjct: 101 SAAL--MRSEADFESAKQKLTNLESLVKQNIIPKNYDEYVSARSTVKSAQADVLQKRQNL 158

Query: 159 SVYRSLKMKLTRMR-----------SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLF 206
            + RS +  +   R           ++   ++++ E   S   +  ++    L  M NL 
Sbjct: 159 ELIRSGEASIGDARLTSTIYAPIDGTVLNQKVEVGEPIISTQSSQAATEMMSLADMNNLI 218

Query: 207 EKNAVSQNDLNQQ 219
            K +VS++D  Q 
Sbjct: 219 FKGSVSEHDAAQL 231



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 56/179 (31%), Gaps = 16/179 (8%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S  +      +  N+   + +     N    +   + +K    D+ Q ++
Sbjct: 97  LTDASAALMRSEADFESAKQKLTNLESLVKQNIIPKNYDEYVSARSTVKSAQADVLQKRQ 156

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHS 325
                 S    +   R   TI +PI GT++  +              Q +  +M +    
Sbjct: 157 NLELIRSGEASIGDARLTSTIYAPIDGTVLNQKV-EVGEPIISTQSSQAATEMMSLA-DM 214

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                +  V+      +  G    +    Y D+       ++ K+  I S+  N+    
Sbjct: 215 NNLIFKGSVSEHDAAQLSPGMPVLLTVAPYPDV---AISGVLTKV-AIQSENLNSPGGN 269


>gi|26247891|ref|NP_753931.1| hypothetical protein c2036 [Escherichia coli CFT073]
 gi|26108294|gb|AAN80496.1|AE016761_71 Hypothetical protein ydhJ [Escherichia coli CFT073]
          Length = 299

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 23/209 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K    +  ++       +  N+ +   V+  DL            EL     +     
Sbjct: 51  DGKIRAEQVSITPQVSGRIIELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQ 109

Query: 242 RHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +  +EAN           A  L   + +++  Q +     + L   +    Q  I 
Sbjct: 110 SDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIR 169

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTAT 349
           +P++G +    +    +YA   +PL  +V       I      K+      H+++G  A 
Sbjct: 170 APVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQ 223

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +          K  +  +  I   I  Q 
Sbjct: 224 ITL----YSDNKTLQGHVSSIGRAIYDQS 248



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 15  MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRII 70

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 71  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 130

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 131 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 170


>gi|54302052|ref|YP_132045.1| hypothetical protein PBPRB0372 [Photobacterium profundum SS9]
 gi|46915473|emb|CAG22245.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 379

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 80/218 (36%), Gaps = 15/218 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFANYLKEISRD---LEQN 269
             L Q    +  S  +L  +  +  N+ R + N++  +   ++     ++ ++   L+Q 
Sbjct: 95  QRLTQAITELMSSQAQLESSKQKLANLERLVKNQVIPKNYGDYIQAKADVRQNNANLQQK 154

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVP 323
           Q+      S  + + +++   TI++PI GT++                 Q +  +M +  
Sbjct: 155 QQNLDLIRSGESSVGESKLTSTIVAPITGTVLSLNV-EVGEPIISTESSQSATQMMSLAN 213

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            +     +  V+      +  G   T+    Y +I      + +      ++        
Sbjct: 214 MND-MIFKGSVSEHDAAQLHVGMPVTMTLAPYPEIEITGILSKVAVQSEKLNSAQEATTA 272

Query: 384 QEYYE--VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           Q  ++    +++  + F    + +R+GF A    T K 
Sbjct: 273 QRSFDNGFQVEVNKIRF-PEGLTIRSGFSATAQITLKK 309



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 3/125 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  IE    + G+I+   +V  IKS   GI+ +     G ++  GTPL+      T  
Sbjct: 37  AEIGTIEKQAIAVGQIVPAHSVQ-IKSQIEGIVGEIFHHVGEEVKTGTPLIKIRPNPTPQ 95

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +      + + +  +++ K  L  L    K  V+ K +    +   D      +   K 
Sbjct: 96  RLTQAITELMSSQAQLESSKQKLANLERLVKNQVIPKNYGDYIQAKADVRQNNANLQQKQ 155

Query: 153 FNYGI 157
            N  +
Sbjct: 156 QNLDL 160


>gi|265765890|ref|ZP_06093931.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263253558|gb|EEZ25023.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 355

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 36/99 (36%), Gaps = 7/99 (7%)

Query: 39  PIEISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
            I+  +++  +  +     V   +        SG I K  V++G+Q+  G  L   +  +
Sbjct: 33  KIDTVIAADKQKFLQFPGRVKAAQDISLSFRVSGTINKIYVKDGAQVRAGQLLAELDPTD 92

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
               +D  +   + ++   +   +         +  +KA
Sbjct: 93  YQVQLDATEAEYRQVKAEAERVMALYKENGTTPNANDKA 131


>gi|157418280|ref|YP_001481352.1| EtsA [Escherichia coli APEC O1]
 gi|169546432|ref|YP_001711874.1| EtsA [Escherichia coli]
 gi|331652493|ref|ZP_08353504.1| secretion protein HlyD [Escherichia coli M718]
 gi|88770330|gb|ABD51767.1| EtsA [Escherichia coli APEC O1]
 gi|168830984|gb|ACA34765.1| EtsA [Escherichia coli]
 gi|331049599|gb|EGI21665.1| secretion protein HlyD [Escherichia coli M718]
          Length = 395

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 34/278 (12%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK-NAVSQ-NDLNQQERIVYK 225
           L   R   + R+++  + S     L   Q D      L  + + + Q NDL   E  + +
Sbjct: 52  LATGRIDAIERVNVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQCNDLRNAEAALNE 111

Query: 226 STLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              EL+      K               N       +     L   +       +KL   
Sbjct: 112 VKAELQSKQALLKQAELRFKRQLRMLRENASSHEDFESAEAMLATTRAELHSLNAKLVQA 171

Query: 284 EKT-------REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKV 334
           +          E   +++P+ G ++             +Q    I+  +   +  I+A++
Sbjct: 172 QIEVDKKKLALEYTRVVAPMDGIVIAI-VTQQGQTVNSNQSAPTIIKLARLDVMTIKAQI 230

Query: 335 TPKQIQHVKKGYTATVRFPHYA------DIREKKFKAIIEKIDPIISQQDNNLQTQE--- 385
           +   I  +  G  A  RF  ++          +  +   E +    S   N   +     
Sbjct: 231 SEADITRISVGQKA--RFSIFSEPDKHYSATLRAVELAPESVMKDDSLASNTSASGSGTS 288

Query: 386 ----YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               YY  +  + +     N + +     A+V      
Sbjct: 289 NASVYYNALFDVPNPE---NRLRIA--MTAQVTLITDE 321



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 62/142 (43%), Gaps = 11/142 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G I   + V  + +  SG +K  +V+ G  + +G  +   +D+   + +   
Sbjct: 47  IENSVLATGRIDAIERV-NVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQCNDLRNA 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVL----------EKAFESREEQLLDFLGKYHSTC 149
           + ++  ++  + ++++ L     ++              + FES E  L     + HS  
Sbjct: 106 EAALNEVKAELQSKQALLKQAELRFKRQLRMLRENASSHEDFESAEAMLATTRAELHSLN 165

Query: 150 SKVFNYGISSVYRSLKMKLTRM 171
           +K+    I    + L ++ TR+
Sbjct: 166 AKLVQAQIEVDKKKLALEYTRV 187


>gi|54303018|ref|YP_133011.1| putative secretion protein [Photobacterium profundum SS9]
 gi|46916446|emb|CAG23211.1| putative secretion protein [Photobacterium profundum SS9]
          Length = 355

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/343 (13%), Positives = 96/343 (27%), Gaps = 89/343 (25%)

Query: 15  ASLKRMTLLSIIGIIGLITWSIL-LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
               +  ++  I   G I  +    P+       G ++     V       G +   QV 
Sbjct: 9   RRWMQSLIIIFILFAGYIVIADRHAPLTTESRVQGYVIQLAPEVT------GTVTDVQVG 62

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           N   + +G PL                 +I + R  +  E++ +                
Sbjct: 63  NNQAVKKGAPLF----------------TIDSSRYTLAVERAEV---------------- 90

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                                        +LK    +  ++Y      + K +  +A  +
Sbjct: 91  -----------------------------ALKQAHEQESALYAKVSSGKAKVATTQASYT 121

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + + +   +K L  +  VS + L+        +   L     +  ++   +     E+ L
Sbjct: 122 NARSEYQRVKKLARQKLVSASMLDNALANNSVALSNLHAAQQDLLSLQVQLGNTPGESTL 181

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                                   + L   +       +++P  G I   Q     + A 
Sbjct: 182 -------------------VHAAENALEQAQLDLSHTQVIAPSDGVITNLQL-EVGSTAS 221

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            + PL+  +P     ++ A    K I  + +  TA V F  + 
Sbjct: 222 TNMPLLTFIPTDS-LWVAADFREKAIALMNEHSTALVTFDAFP 263


>gi|87121822|ref|ZP_01077708.1| hypothetical protein MED121_00820 [Marinomonas sp. MED121]
 gi|86162851|gb|EAQ64130.1| hypothetical protein MED121_00820 [Marinomonas sp. MED121]
          Length = 373

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 89/289 (30%), Gaps = 30/289 (10%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +    +           V N     V   +         I L+      K   L    + 
Sbjct: 40  QNTASETQSPTLEQNVTVENTLKKKVQAEIVHAQIMQDKITLSGTTQPTKEIQLTTGAAG 99

Query: 195 HQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +++     LF K   + +      + I+   T  L  NI + K ++    +L  +  +
Sbjct: 100 KIRNI-----LFNKGEYIPKG-----KAILSIDTRSLNANIAQAKALIAQ-RQLELDGAV 148

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +        + ++   +   A   + L  LE   E   +++P +G +            Q
Sbjct: 149 KLKQQKYSSAVNVATAKADLASAKATLRSLEIDLENAVLVAPFSGVLNTLDV-EVGQLVQ 207

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            +  +   V  +    I   V  K++  +K+G  A V           K    +  +  +
Sbjct: 208 NNVAIGDFVSIN-PLTIEINVPQKKVSRIKQGLQANVALS-----TGDKVAGTVSYVSSV 261

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
              +  ++       + +K+ ++     + ++  G  A V       + 
Sbjct: 262 ADSETRSIA------IEIKVPNV-----DNKIPAGITAHVDLALPERSA 299


>gi|120553940|ref|YP_958291.1| RND family efflux transporter MFP subunit [Marinobacter aquaeolei
           VT8]
 gi|120323789|gb|ABM18104.1| efflux transporter, RND family, MFP subunit [Marinobacter aquaeolei
           VT8]
          Length = 402

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 78/236 (33%), Gaps = 31/236 (13%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             ++ K     A     Q +   +  L E   VS   L Q +    ++   LR    +++
Sbjct: 120 QSIQQKVQAAEADAEFAQNEYQRLLALEESRFVSTEQLQQAKSTAARAQAILRSARFDEE 179

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                +        +  A+                       +  +K  E+  + SP+ G
Sbjct: 180 VAAHELAAAQTRLQISTAS-----------------------SNGQKPAERVAVRSPVNG 216

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++     S     Q  +P+++ V       +  +V       ++ G    VR   +   
Sbjct: 217 AVLALVRQSEG-VIQAGEPILE-VGDPGALEVVVEVLSFDAVKLEPGLG--VRLSGWG-- 270

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
                +A + +I+PI  +  + L  +E   V +    ++  +   +L +G+  +  
Sbjct: 271 -GPVLEATVRRIEPIGFEDVSALGVEE-QRVQVIADMVSPREQWRQLGDGYRVDAD 324


>gi|157155772|ref|YP_001465586.1| multidrug resistance protein MdtN [Escherichia coli E24377A]
 gi|157077802|gb|ABV17510.1| multidrug resistance protein MdtN [Escherichia coli E24377A]
          Length = 343

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYKANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASTMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYKANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|312889495|ref|ZP_07749047.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
 gi|311298047|gb|EFQ75164.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
          Length = 351

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 16/157 (10%)

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           ++E  +    +  S+L I +K   + +IL+P  GT++  +      Y      L  +   
Sbjct: 135 EVENARLQMQNAASQLNISKKQVGKTSILAPETGTLIDKKIN-RGEYVTPGTTLGTMACL 193

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +++  +   V   ++ H+KKG  A VR   Y ++    F   +  I P+ S         
Sbjct: 194 NEVL-VNVFVQENEVAHLKKGNAAIVRADAYPNLT---FTGKVSAIIPVASAAKT----- 244

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             + V ++I     ++    L  G    V F  +  +
Sbjct: 245 --FPVEIRI----VNNKVSRLLAGMNVSVTFDGEKQS 275


>gi|124002298|ref|ZP_01687151.1| cation efflux system protein, putative [Microscilla marina ATCC
           23134]
 gi|123992127|gb|EAY31495.1| cation efflux system protein, putative [Microscilla marina ATCC
           23134]
          Length = 413

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 27/177 (15%)

Query: 195 HQKDLTMMKNLF--EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            QK L +   L   ++    Q  L + +  V K+  +LR  +         I +   E  
Sbjct: 143 QQKYLEIKAELVYLKQEMARQQTLLKAKAGVQKNVQKLRSEVA--------IKQAQLEGM 194

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            +F +YL   +  L                 +  R Q  I +P++G I      +   Y 
Sbjct: 195 AKFLHYLGINTAQL---------------TTQNIRRQVAITAPMSGYITSINMHN-GVYV 238

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
             S+ LM+IV      +I   V  K +  V +    T   P     + +    +I K
Sbjct: 239 APSRELMEIV-DEGHLHIELDVFEKDVALVAEEQKITYSVPALGKKQYRGTVHVIGK 294


>gi|83646481|ref|YP_434916.1| membrane-fusion protein [Hahella chejuensis KCTC 2396]
 gi|83634524|gb|ABC30491.1| Membrane-fusion protein [Hahella chejuensis KCTC 2396]
          Length = 364

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 59/197 (29%), Gaps = 21/197 (10%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E + N+     +       Y  A  E  N       DL+  +       +++  +     
Sbjct: 93  EEQANLRSTLAVQAERESAYRRAQ-ELYNRRVGSEADLDAARARVDQSQAEIEAIRTRIA 151

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKKGY 346
              I +P  G ++  +  S     + S  L  +     L+ ++    +    + ++K G 
Sbjct: 152 AHQITAPFNG-VLGLRHISVGALVEPSDVLTTL---DDLSVVKVDFAIPSVFLANLKPGL 207

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
                   Y       F   ++ I P +      +Q              AF++    L 
Sbjct: 208 KVEAETSAYPGQT---FTGELKSISPRVDPVTRTVQ-----------ARAAFNNPGRMLL 253

Query: 407 NGFPAEVLFTAKNTTLA 423
            G   ++   ++  T  
Sbjct: 254 TGMLLQLDLQSRPRTAL 270



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 10/96 (10%), Positives = 37/96 (38%), Gaps = 4/96 (4%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +     ++G+ + +G  L+  +D E    +     S   ++   ++       L N+   
Sbjct: 69  VVSVHFDDGASVKRGDLLIKLDDEEEQANLR----STLAVQAERESAYRRAQELYNRRVG 124

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            E   ++   ++     +  +  +++  + I++ + 
Sbjct: 125 SEADLDAARARVDQSQAEIEAIRTRIAAHQITAPFN 160


>gi|75676232|ref|YP_318653.1| secretion protein HlyD [Nitrobacter winogradskyi Nb-255]
 gi|74421102|gb|ABA05301.1| Secretion protein HlyD [Nitrobacter winogradskyi Nb-255]
          Length = 414

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 72/205 (35%), Gaps = 31/205 (15%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILL------------------PIEISV 44
              W    R    S + +  LS  G+  L T++++                    IE +V
Sbjct: 19  PPAWTAPARRARGSRRLVLGLSAAGLAALGTFAVMGFRAPSPDSLYETVAVTRQDIESTV 78

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +++G+I    +V ++ +  +G +K  +V  G ++  G  +   +    +  ++  +  + 
Sbjct: 79  AATGKIQPYASV-DVGAQVTGQLKHLRVAVGDKVTAGRVVAEIDAEVQSAKVEGIEADLA 137

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            LR  +  +++ L F     +           Q L           +        +   +
Sbjct: 138 RLRAELAEQEAGLVFAERNVE---------RHQTLSQTSAVSKLAFETTTRDRDILIARI 188

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLR 189
                R+R +   + DL  + + LR
Sbjct: 189 DASKARIRQM---QADLRAQKTALR 210



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 49/336 (14%), Positives = 111/336 (33%), Gaps = 25/336 (7%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                     +  +  L             +  +    +  +E+      D      +T 
Sbjct: 23  TAPARRARGSRRLVLGLSAAGLAALGTFAVMGFRAPSPDSLYETVAVTRQDIESTVAAT- 81

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            K+  Y    V   +  +L  +R    +++      + + A + S +     ++ +    
Sbjct: 82  GKIQPYASVDVGAQVTGQLKHLRVAVGDKVTAGRVVAEIDAEVQSAK-----VEGIEADL 136

Query: 210 AVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           A  + +L +QE  +   +  +E  + + +   + +   E            +      + 
Sbjct: 137 ARLRAELAEQEAGLVFAERNVERHQTLSQTSAVSKLAFETTTRDRDILIARIDASKARIR 196

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHS 325
           Q Q   AD  ++ T L   R    I +P+ GT+V   +         +   PL+  +   
Sbjct: 197 QMQ---ADLRAQKTALRFAR----ITAPMGGTVVSVDA-KEGQTLNANYDTPLILQIADL 248

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN----NL 381
               +   V+   +  +++G    + F       ++K+ A + +I P   + DN      
Sbjct: 249 DTMTVWTDVSEADVVKLREGMP--LWFTTLG-RPDRKWHATLRQIQPAPRRPDNKKAETK 305

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            T +   V+L        + +  LR G  A+V F  
Sbjct: 306 TTPQSGNVVLYTALFDVPNADGSLRAGMTAQVFFVT 341


>gi|86141005|ref|ZP_01059564.1| cation efflux system protein [Leeuwenhoekiella blandensis MED217]
 gi|85832947|gb|EAQ51396.1| cation efflux system protein [Leeuwenhoekiella blandensis MED217]
          Length = 381

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 80/207 (38%), Gaps = 24/207 (11%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            + +   EL E +   K+       L +E      N+LK    + +++  T+     KL 
Sbjct: 117 EIQQQFQELAEQLDYLKSEYERQQALMEENITSKKNFLK-AESEYKRSLATYTGLRKKLE 175

Query: 282 IL----EKTRE-----QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           +L    E+  +     Q +I +PI GTI      S  +Y   + P+M+IV      ++  
Sbjct: 176 MLHISPERVLQGAYTTQASIFAPITGTIAE-TFVSKGSYVSSADPIMEIV-DIDHIHLEL 233

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +V  K +  VKKG    ++F    +  +K ++  +  I   ++Q+   +    +      
Sbjct: 234 EVFEKDMLKVKKGQK--IQFS-IPESSDKSYEGEVHLIGNSLNQEGRTVTVHGH------ 284

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +   +  N  +  G   E      +
Sbjct: 285 -IEHEKATPNFAV--GMFIEAQIETGS 308



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 44  VSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED---IETTDLIDLK 99
           V++SG I +  +N   I +   G IK   +  G  + +G  L+T E+   +E        
Sbjct: 66  VAASGMIDVPPENRAVITAFMGGYIKNNPLLIGDAVKKGQVLITLENPEFVEIQQQFQEL 125

Query: 100 KVSIKNLRCHIDTEKSALDF 119
              +  L+   + +++ ++ 
Sbjct: 126 AEQLDYLKSEYERQQALMEE 145


>gi|332995206|gb|AEF05261.1| membrane fusion protein [Alteromonas sp. SN2]
          Length = 348

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 65/163 (39%), Gaps = 16/163 (9%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGS 76
             +L+++    LI W    P   +   +G +      D    I +   G IK++ V  G 
Sbjct: 30  GLVLAMVVCASLILW--FTPWMQTAYGTGMVDSLDPVDRTQAISALVDGQIKQWHVREGM 87

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD----------FLNNKYDV 126
           Q+  G P++T  D +    ++  +  +   +      ++A+            L  +  V
Sbjct: 88  QVKAGDPIVTLIDTDAGR-LEKLQSQLAAAKAGHQANETAVANAENNLARQMGLQEQGLV 146

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             K  E+ + ++ +   K  S+ S + +  +S   +S++ K+ 
Sbjct: 147 SRKDVEAAQIKVQELKAKAASSLSAINDVSMSLSRQSIQTKVA 189



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 65/177 (36%), Gaps = 13/177 (7%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDLEQNQR 271
             L + +  +  +    + N     N   ++       E  L     ++     +++ + 
Sbjct: 104 GRLEKLQSQLAAAKAGHQANETAVANAENNLARQMGLQEQGLVSRKDVEAAQIKVQELKA 163

Query: 272 TFADEMSKLTILEKTREQKTI---LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
             A  +S +  +  +  +++I   ++P+ GTI+   S   S + +    L + +P +   
Sbjct: 164 KAASSLSAINDVSMSLSRQSIQTKVAPVDGTIIRLYSGGVSTFVKAGAVLGQFIPLNAKR 223

Query: 329 YIRAKVTPKQIQHVKKGYTATV--------RFPHYADIREKKFKAIIEKIDPIISQQ 377
            IR  VT      VKKG  A +        +F  +       F   +  ++P+ S  
Sbjct: 224 SIRITVTGLDAPLVKKGAKARLQFEGWPVFQFSGWPGSSIGTFGGEVVYVEPVASTA 280


>gi|312879278|ref|ZP_07739078.1| efflux transporter, RND family, MFP subunit [Aminomonas paucivorans
           DSM 12260]
 gi|310782569|gb|EFQ22967.1| efflux transporter, RND family, MFP subunit [Aminomonas paucivorans
           DSM 12260]
          Length = 380

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 92/319 (28%), Gaps = 40/319 (12%)

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I +L                + DV+  A E    Q         +    V    +S   +
Sbjct: 25  IASLAGRSRAVPPPPPPAAARVDVVSPAAEPLLRQGFSASATLEALEDVVLVPKVSGKLK 84

Query: 163 SLKMK-----LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            L++              L+  D + +   L A  + ++  L   +   E+    +    
Sbjct: 85  ELRVSPGDRVRRGQVLAVLDHRDQDAQVGALSAQTAVNRAGLDQARAELEQAQRERERYR 144

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           +     Y +  EL   +   +      N                          T     
Sbjct: 145 KLLAEGYATKQELDTRVTTLQTAQAAYNRAV----------------------ATVRQSQ 182

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + L   +  R +  IL+P+ G ++ +   +       S P+ + V          +V   
Sbjct: 183 ASLQAQQVNRSEFVILAPMDGVVLKDYDLAPGALLGVSSPVAE-VAQIDTLKAVIQVPEN 241

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           Q+  V++G T  +    +      +    + +IDP +              V +++ +  
Sbjct: 242 QLPRVREGMTGLLTGEGFPGR---EVTGTVRRIDPYVDPSTRTA------RVEVQVPN-- 290

Query: 398 FSDNNIELRNGFPAEVLFT 416
              +   L+ G  A+V   
Sbjct: 291 -GGSEAPLKPGMFAKVFLV 308



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 37/100 (37%), Gaps = 2/100 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K+ +V  G ++ +G  L   +  +    +          R  +D  ++ L+    +
Sbjct: 80  SGKLKELRVSPGDRVRRGQVLAVLDHRDQDAQVGALSAQTAVNRAGLDQARAELEQAQRE 139

Query: 124 YDVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +   K        +Q LD       T    +N  +++V 
Sbjct: 140 RERYRKLLAEGYATKQELDTRVTTLQTAQAAYNRAVATVR 179


>gi|218707104|ref|YP_002414623.1| putative HlyD family secretion protein [Escherichia coli UMN026]
 gi|293407090|ref|ZP_06651014.1| yhiI protein [Escherichia coli FVEC1412]
 gi|298382837|ref|ZP_06992432.1| yhiI protein [Escherichia coli FVEC1302]
 gi|300898785|ref|ZP_07117091.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 198-1]
 gi|218434201|emb|CAR15118.1| putative HlyD family secretion protein [Escherichia coli UMN026]
 gi|291425901|gb|EFE98935.1| yhiI protein [Escherichia coli FVEC1412]
 gi|298276673|gb|EFI18191.1| yhiI protein [Escherichia coli FVEC1302]
 gi|300357573|gb|EFJ73443.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 198-1]
          Length = 355

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 49/404 (12%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  I   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAIAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGIAWVRVNE 341


>gi|163803698|ref|ZP_02197559.1| hypothetical protein 1103602000423_AND4_00050 [Vibrio sp. AND4]
 gi|159172509|gb|EDP57373.1| hypothetical protein AND4_00050 [Vibrio sp. AND4]
          Length = 378

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 67/191 (35%), Gaps = 12/191 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G I+   + V IKS   GI+ +  V+ G  + QG PL+      T   +   
Sbjct: 42  IEKQAVAVGHIVPA-HSVSIKSQIDGIVGEIYVKVGENVQQGQPLIKVRPNPTPRALTDA 100

Query: 100 KVSIKNLRCHIDTEKSAL---------DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
              +      +++ K  L         D + N YD    A  + +    D L K  +   
Sbjct: 101 STDLMRSEADLESAKQKLVNLESLVRQDIIPNNYDDYVSARSAVKSAEADVLQKRQNLEL 160

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNR--LDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
                 +    R        +    LNR     E   S   +  ++    L  M +L  K
Sbjct: 161 IRSGEALIGDARLTSTIYAPIDGTVLNRKVEVGEPIISTESSQAATEMMSLADMNSLTFK 220

Query: 209 NAVSQNDLNQQ 219
            +VS++D  Q 
Sbjct: 221 GSVSEHDAAQL 231



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 70/219 (31%), Gaps = 25/219 (11%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-----------ANYLKEISRDLEQN 269
           R +  ++ +L  +  + ++  + +  L      +             + +K    D+ Q 
Sbjct: 95  RALTDASTDLMRSEADLESAKQKLVNLESLVRQDIIPNNYDDYVSARSAVKSAEADVLQK 154

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVP 323
           ++      S   ++   R   TI +PI GT++  +              Q +  +M +  
Sbjct: 155 RQNLELIRSGEALIGDARLTSTIYAPIDGTVLNRKV-EVGEPIISTESSQAATEMMSLA- 212

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                  +  V+      +  G    +    Y DI        +      ++  ++N   
Sbjct: 213 DMNSLTFKGSVSEHDAAQLSTGMPVLLTVAPYPDIEISGVLTKVAIQSENLNSPEDNASA 272

Query: 384 QEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + +   +EV +           + LR+GF +    T   
Sbjct: 273 KSFDNGFEVEV---GELKIPKEVLLRSGFSSTAEITLSK 308


>gi|323495915|ref|ZP_08100983.1| hypothetical protein VISI1226_02415 [Vibrio sinaloensis DSM 21326]
 gi|323319131|gb|EGA72074.1| hypothetical protein VISI1226_02415 [Vibrio sinaloensis DSM 21326]
          Length = 361

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 82/243 (33%), Gaps = 17/243 (6%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     +      +  +  ++ V  +        ++I L      +K + + A ++    
Sbjct: 31  LGALQAEEAPAKQQSDSVPLAKVAVTSFTAQKTFKAIDLYGRTAPDKQAKMGAEIAGKIV 90

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +L ++K      +V++  +      + K  L+++    E+ N +  + E   +A     +
Sbjct: 91  ELKVLKG----QSVAKGQVIAL---IDKGDLDIQ---LERANAMLKVREKEFKAAQSLKS 140

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
              +        Q    +  + ++  +      ++ +P AG + +       ++     P
Sbjct: 141 RGLQGEVAFTNAQAALVEAKAMVSNAKIALRNTSVTAPFAGIVDHLYI-EKGDFVGVGDP 199

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +  ++       I A V+ + IQ +  G  A V F              +  I  I S  
Sbjct: 200 VASLI-DLNRVVIEADVSERHIQDLTLGQPAQVEFISGDS-----VTGEVRYISRISSPS 253

Query: 378 DNN 380
            N 
Sbjct: 254 TNT 256


>gi|207722650|ref|YP_002253086.1| cation efflux protein [Ralstonia solanacearum MolK2]
 gi|206587832|emb|CAQ18414.1| cation efflux protein [Ralstonia solanacearum MolK2]
          Length = 409

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 77/243 (31%), Gaps = 26/243 (10%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL--ELRENIHEQKNMLR 242
           +  +R + +     +   K LF+   +   DL Q E  +  +    +L      +   L 
Sbjct: 107 AGKIRGVYAKVGDTVAKGKPLFD---IESPDLVQAESTLISTAGTRKLTTTALARARQLF 163

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFA------DEMSKLTILEKTREQKTILSPI 296
            I  L  +   +  +  +      +  +   A       +M ++    +T    T+ SPI
Sbjct: 164 EIQGLSQKDLDQATSDQQAAEAAYKAAREAVAIFGKTPAQMDQMIETRRTDPVLTVTSPI 223

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           AG +   ++       Q        V      +++A V    +  ++ G    +R   + 
Sbjct: 224 AGQVTA-RAAQPGLLVQPGSAAPFTVADVSTMWMQAFVPEADVPLLRVGQPVKIRVMAFP 282

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +     F   +  +   +    + +       V  +I D        ELR G       T
Sbjct: 283 NR---VFAGKVTTLGASVDANTHRI------LVRSEIDDP-----KHELRPGMFTAFDIT 328

Query: 417 AKN 419
             +
Sbjct: 329 TGD 331


>gi|330830624|ref|YP_004393576.1| HlyD family secretion protein [Aeromonas veronii B565]
 gi|328805760|gb|AEB50959.1| HlyD family secretion protein [Aeromonas veronii B565]
          Length = 349

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 82/238 (34%), Gaps = 21/238 (8%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +S+    L L  K +  R+++ S +    ++K   +        + + E ++     + +
Sbjct: 45  QSLAEPTLKLVGKLAANRSVIISPEVTGRIVKIAVQSG----QSVAKGETLIALDAGKQQ 100

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             + EQ   LR  N    +   +          +LE  + T A   ++L         +T
Sbjct: 101 AELAEQSASLRDENRKLSDMR-KLVARGAVTQSELEGQEATVAQVQARLDAARYELSLRT 159

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P AGT+      S          L+ +        +   V  + +  ++ G   T  
Sbjct: 160 LQAPFAGTV-SLIDLSEGALVNSGDTLLHL-DELDKLRLDLAVPERYLSLLRPGMAVTAT 217

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              + D +   F   +  +D  +S    N+      +  + I      + N +LR G 
Sbjct: 218 STAWPDQQ---FNGTLTTLDSRVSNDTQNI------KARVMIP-----NGNGQLRPGM 261



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 60/154 (38%), Gaps = 8/154 (5%)

Query: 55  NVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
           N   I SP  +G I K  V++G  + +G  L+  +  +    +  +  S+++    +   
Sbjct: 61  NRSVIISPEVTGRIVKIAVQSGQSVAKGETLIALDAGKQQAELAEQSASLRDENRKL--- 117

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            S +  L  +  V +   E +E  +     +  +   ++    + + +      +     
Sbjct: 118 -SDMRKLVARGAVTQSELEGQEATVAQVQARLDAARYELSLRTLQAPFAGTVSLIDLSEG 176

Query: 174 IYLNRLDL---ENKSSLLRALLSSHQKDLTMMKN 204
             +N  D     ++   LR  L+  ++ L++++ 
Sbjct: 177 ALVNSGDTLLHLDELDKLRLDLAVPERYLSLLRP 210


>gi|227505295|ref|ZP_03935344.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
 gi|227198114|gb|EEI78162.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
          Length = 341

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 48/161 (29%), Gaps = 9/161 (5%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   +R V            +  +           A  + A   + +   L+        
Sbjct: 55  LEGVDREVGSKQRAANAAYAQLSDAQLAQRAAELGAQQQIATQSQAVDHALKSAAGARVA 114

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYIRAKV 334
                  LE       + SP+ G I      +     + ++ PL+ I        ++AKV
Sbjct: 115 AEEANAKLEFDISGSHLFSPLNGVIT--SVTAQQG--RPAEGPLLAIA-DDSSLLVKAKV 169

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
               I  +K G   T  F        K++   +  I P+ +
Sbjct: 170 KEADIADIKVGDRVT--FTS-PSQPHKEYTGTVSFISPVSA 207


>gi|254526949|ref|ZP_05139001.1| secretion protein HlyD [Prochlorococcus marinus str. MIT 9202]
 gi|221538373|gb|EEE40826.1| secretion protein HlyD [Prochlorococcus marinus str. MIT 9202]
          Length = 353

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 56/299 (18%), Positives = 106/299 (35%), Gaps = 35/299 (11%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D+++K    R   +L  L  +    +  F    S       +++   + I  + ++   +
Sbjct: 3   DLIKKNINLRSGIILLSLTIFFVFITNSFKKNKSKDISDFVVQVE--KGILSDSINTSGE 60

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLN---QQERIVYKSTLELRENIHEQKNM 240
              +R      +K   + +   ++   V ++ +      E  +YK   EL  N  +QK+ 
Sbjct: 61  VKAIRTSNIGPRKQGVIKEINVDEGDLVKKDQVLAFLDDEDFIYKIE-ELELNFEKQKSE 119

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                 LY E  +   ++           +  +    +KL   +  +    I +P  G I
Sbjct: 120 FLRREYLYQEGAVSKEDFESY--------KNNYNISRAKLNDAKAEKSFYLIKAPYGGKI 171

Query: 301 VYNQSFSSSNYAQQSQPLMK-------IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
              +     +Y   S  L         I   S+   I AKV    I  +K G  A+VR  
Sbjct: 172 TA-KYAEIGSYVTPSTNLSSDPKTKNFIFELSEGLEIVAKVPESDIGRIKIGQEASVRIE 230

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
            Y   +     A+++KI     + +N       +EV L      F D   E++ G  A+
Sbjct: 231 AYPSKKY---SAVVKKIATRAVKDNNVTS----FEVTLN-----FKDIFEEIKIGMTAD 277



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 9/108 (8%)

Query: 49  EILNEDNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            I     V  I+         G+IK+  V+ G  + +   L   +D +    I+  +++ 
Sbjct: 54  SINTSGEVKAIRTSNIGPRKQGVIKEINVDEGDLVKKDQVLAFLDDEDFIYKIEELELNF 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           +  +    +E    ++L  +  V ++ FES +        K +   ++
Sbjct: 114 EKQK----SEFLRREYLYQEGAVSKEDFESYKNNYNISRAKLNDAKAE 157


>gi|166712301|ref|ZP_02243508.1| membrane fusion protein [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 377

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 63/177 (35%), Gaps = 17/177 (9%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + + +  LR +   Y  A       L     D++Q +    +  ++  +        T+
Sbjct: 114 AVAQSEAQLRKLENSYRRATQLIGQQLVSA-ADVDQLKFDVENSRAQHRLASLELSYTTV 172

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SPI+G I      +  N+ Q + P+ +IV           V  +++  +K G   T+  
Sbjct: 173 QSPISGVIASRSIKT-GNFVQINTPIFRIV-DDSQLEATLNVPERELATLKSGQPVTLLA 230

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                   ++F   +++I P++            + V+      AF      L+ G 
Sbjct: 231 DALP---GQQFVGKVDRIAPVVDSGSGT------FRVV-----CAFGKGAEGLQPGM 273



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 4/161 (2%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  +        + +  SG+     VE G ++  G  L+  +       +   +  ++
Sbjct: 65  TGTSALEPRAEAQVV-AKTSGVALSVMVEEGQKVSAGQALVRLDPDRAHLAVAQSEAQLR 123

Query: 105 NLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            L   +    +     L +  DV +  F+    +    L     + + V    IS V  S
Sbjct: 124 KLENSYRRATQLIGQQLVSAADVDQLKFDVENSRAQHRLASLELSYTTV-QSPISGVIAS 182

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +K      I      + +  S L A L+  +++L  +K+
Sbjct: 183 RSIKTGNFVQINTPIFRIVDD-SQLEATLNVPERELATLKS 222


>gi|163851823|ref|YP_001639866.1| GAF domain-containing protein [Methylobacterium extorquens PA1]
 gi|163663428|gb|ABY30795.1| GAF domain protein [Methylobacterium extorquens PA1]
          Length = 628

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 17/211 (8%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD---LEQNQRTFADEMSKLTI 282
              +L   + ++   L  +  + +     +       +R    +   +       +++ +
Sbjct: 420 RKGDLLAALEDRDLALERLRWVTERQQRTYEYDKALATRQPATINVVKSQIEQADAQIRL 479

Query: 283 LEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           L++   +    +P  G IV  + S S      + Q L +I P      +   V  + I  
Sbjct: 480 LDEQIARSKFTAPFDGLIVSGDLSQSIGGAISRGQVLFEIAPLDSYRVV-LSVDERLIAD 538

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           +++G T  V      D  +      I+ I P+          +  + V  +I D A    
Sbjct: 539 LREGQTGHVLATSLPDQPQVL---TIQTITPVA----EAKNGRNLFRVEGRIEDGAT--- 588

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
              LR G             LA     PI D
Sbjct: 589 --RLRPGMEGIAKVDVDRRLLAWVWARPIVD 617


>gi|124514669|gb|EAY56181.1| putative secretion protein HlyD [Leptospirillum rubarum]
          Length = 319

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 82/251 (32%), Gaps = 21/251 (8%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           + +++   + +   ++     +   +  L S +  L + +   +   V Q  + + +   
Sbjct: 55  IDVRVHDNQPVRKGQILFRLDTGDYQTKLMSDEGSLEIARKRVD---VDQARIQEVQAEE 111

Query: 224 YKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +   +L+     ++        L     A       ++ +   +  +Q       +++ 
Sbjct: 112 ERIESDLKRISRLRRGGYSSTQSLIHLRLALKGAKARIQSLENQIRADQGMIERRTAQVA 171

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI---RAKVTPKQ 338
                    T+LSP+ G +          Y     PL  +VP+          +++T   
Sbjct: 172 EDRLNLSYTTVLSPVDGQMTVKSVV-RGLYVSPGTPLGYVVPYHVWVIANLKESRLT--- 227

Query: 339 IQHVKKGYTATVRFPHYADIRE-KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
             +V+ G    +R   Y          +I +    ++S       T  + +V+ ++    
Sbjct: 228 --YVRPGNPVDIRVDAYPGRVFHGHVASIQQTTGAVMSLLPPENATGNFTKVVQRV---- 281

Query: 398 FSDNNIELRNG 408
                IEL  G
Sbjct: 282 --PVRIELDPG 290



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 61/180 (33%), Gaps = 8/180 (4%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +  +  +  + I G + W+        V S+ +         +     G +   +V +
Sbjct: 6   TFVAILLGVGALVIGGFLWWNH----SRHVVSTEDATVSGRPYPVTVRIPGTVIDVRVHD 61

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L   +  +    +   + S++  R  +D +++ +  +  + + +E   +  
Sbjct: 62  NQPVRKGQILFRLDTGDYQTKLMSDEGSLEIARKRVDVDQARIQEVQAEEERIESDLKRI 121

Query: 135 EEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                   G Y ST S +     +      ++    ++R+          + +  R  LS
Sbjct: 122 SRL---RRGGYSSTQSLIHLRLALKGAKARIQSLENQIRADQGMIERRTAQVAEDRLNLS 178


>gi|319404803|emb|CBI78404.1| Transport protein transmembrane [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 301

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 100/297 (33%), Gaps = 21/297 (7%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-----LENKSSLLRAL 191
           QL  F+     T + +    I+ +   +   + R+      +++      E   +L R  
Sbjct: 7   QLPPFVSTLQKTDNALIKGNITLISPQVSGIVKRVYVQDYQKVEKGMVLFELDDTLFRYQ 66

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L+  Q  L   K       +SQ  L Q+E     + L   + +  Q  +       +  A
Sbjct: 67  LAQAQAILEAKKAKLAS-VLSQIQLLQKEIDRLITELSHSKGLSFQGTLPLSSAASHLVA 125

Query: 252 NLEFANYL-KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
             E  + L K++  + +  Q    +  + + + E       I+SP  G I          
Sbjct: 126 TFETKSQLHKKLEFERQGLQSDIVEAKAGVEVAELNLAHTKIISPAVGHIGSVGI-QVGQ 184

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           Y +    L+ +V  S   +I A     QI +++ G      F     ++ +K    + + 
Sbjct: 185 YVESGMRLVAVV--SDDIWIIAHYKETQISNMRIGQPVV--FYA-DALKNQKLTGRVVRF 239

Query: 371 DPIISQQDNNLQTQEYY--------EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            P    + + L T+  +         + ++I      +   +L  G          +
Sbjct: 240 APATGSEFSLLGTETAHGNFIKIAQRISIRIAIDQGQEGIEKLIPGMSVITYVDTAS 296



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 59/150 (39%), Gaps = 8/150 (5%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            N+  I    SGI+K+  V++  ++ +G  L   +D        L +  +   +  ++ +
Sbjct: 25  GNITLISPQVSGIVKRVYVQDYQKVEKGMVLFELDDT-------LFRYQLAQAQAILEAK 77

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K+ L  + ++  +L+K  +    +L    G          +   S +  + + K    + 
Sbjct: 78  KAKLASVLSQIQLLQKEIDRLITELSHSKGLSFQGTLP-LSSAASHLVATFETKSQLHKK 136

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +   R  L++     +A +   + +L   K
Sbjct: 137 LEFERQGLQSDIVEAKAGVEVAELNLAHTK 166


>gi|312876317|ref|ZP_07736303.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311796963|gb|EFR13306.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 389

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 73/240 (30%), Gaps = 19/240 (7%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE ++  L       QK L M K   E        L + +           +N       
Sbjct: 92  LELETQDLSIQYKIAQKQLEMAKLQLES-------LKKLKEKWSSQNQSSLQNSTAPIQS 144

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                 L  +       Y  +    L++ Q   A    +       ++Q+ I S   G +
Sbjct: 145 FSQNTLLSSQMQGTSPGYSLDDQIKLQEKQVEIAQLNLQSIKQNMDKQQQYIKSQSNGVV 204

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
               +    N     Q     V   +   I   V      ++ +G  A +RF       E
Sbjct: 205 TAINAR-EGNVFSSVQLPAVTVEDPENLQIVLNVNQYDAINISEGQKALIRF------GE 257

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           K F  +++ + P  ++       +   +V + I      +N+  ++ GF  +V       
Sbjct: 258 KTFDGVVKMVSPAATKIITQTGAENVVKVYVDI-----LNNDGTIKPGFNVDVDIKLGEK 312



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 55/150 (36%), Gaps = 3/150 (2%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + K  V+ G ++ +G  LL  E  + +    + +  ++  +  +++ K   +  +++   
Sbjct: 74  VLKVFVDVGDKVKKGDKLLELETQDLSIQYKIAQKQLEMAKLQLESLKKLKEKWSSQN-- 131

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            + + ++    +  F      +          S+   +K++  ++    LN   ++    
Sbjct: 132 -QSSLQNSTAPIQSFSQNTLLSSQMQGTSPGYSLDDQIKLQEKQVEIAQLNLQSIKQNMD 190

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
             +  + S    +    N  E N  S   L
Sbjct: 191 KQQQYIKSQSNGVVTAINAREGNVFSSVQL 220


>gi|297538958|ref|YP_003674727.1| RND family efflux transporter MFP subunit [Methylotenera sp. 301]
 gi|297258305|gb|ADI30150.1| efflux transporter, RND family, MFP subunit [Methylotenera sp. 301]
          Length = 377

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 72/212 (33%), Gaps = 25/212 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + +LNQ +  + ++  + RE I+      R +      +N +   Y         + +  
Sbjct: 112 EAELNQAKASLMEAEAQGREAINNSDRA-RTLQNTGAMSNQQIDQYTTAADTSKARIEVA 170

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A  +++    E   +   I +P  G I  +++ +          L K++        RA
Sbjct: 171 KASVVTQ----EIRLKNTKIYAPDNGVI-SSRNATVGAVISTGSELFKLI-RQSRLEWRA 224

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +V    +  +K G    V            FK  +  I P +  Q  N         ++ 
Sbjct: 225 EVVSSDLAKIKAGMQVNV-----VAADGSSFKGKVRMISPTVDTQTRN--------ALIY 271

Query: 393 ITDLAFSDNNIELRNGFPAEV-LFTAKNTTLA 423
           +        N   + G  A+      K++TLA
Sbjct: 272 VD----LPANSPAKAGMYAKGEFILGKSSTLA 299



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 52/130 (40%), Gaps = 8/130 (6%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +S++G ++     +         + +  V  G  + +G  L TF        ++  K S+
Sbjct: 63  ISANGNVVAWQEAIIGSESNGLRLTQVLVNVGDVVKKGQLLATFSAESIEAELNQAKASL 122

Query: 104 KNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                 ++ E    + +NN  +   L+       +Q+  +     ++ +++     S V 
Sbjct: 123 ------MEAEAQGREAINNSDRARTLQNTGAMSNQQIDQYTTAADTSKARIEVAKASVVT 176

Query: 162 RSLKMKLTRM 171
           + +++K T++
Sbjct: 177 QEIRLKNTKI 186


>gi|224538619|ref|ZP_03679158.1| hypothetical protein BACCELL_03513 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519753|gb|EEF88858.1| hypothetical protein BACCELL_03513 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 379

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 67/210 (31%), Gaps = 18/210 (8%)

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA-DEMSKLTILEKTRE 288
           L+E +   +               +  +   E  ++L  N+RT      + +  L+    
Sbjct: 177 LKEELAILEKQPEKNEMNILSVRRQLFDLRMEHKKELALNRRTLELAYENMINSLKMWEA 236

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV------PHSKLTYIRAKVTPKQIQHV 342
           +  I S   GT++  +S+  SN   +   +  +V      P  +      K++ +++  +
Sbjct: 237 RYLIKSSSNGTVILGKSWGISNVINEGDTVCSVVSEQKGQPTGR-----IKLSQEEVAEI 291

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           + G    +    Y           +  I  +   ++  ++    Y +     D    +  
Sbjct: 292 RTGDKVNIALKKYPVHTYGYLTGEVASIAYVPYSKNYAVEINFPYGLNTTTKDEIEYEIG 351

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
           +        +      + ++   I  P+  
Sbjct: 352 LS------GKAEIITSDRSILSRIFTPLYQ 375



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 80/214 (37%), Gaps = 16/214 (7%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE--IKSPFSGIIKKFQVENGSQI 78
            +  +IG++ +   ++    +   +    +  +D      I    SGII +F VE+  Q+
Sbjct: 40  IIYGLIGLLIIFA-ALFSYPDTVKTG---VTIDDLSKTAWITVGQSGIIDRFFVEDRQQV 95

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-NKYDVLEKAFESREEQ 137
            +   L    +  + + +      + ++  +  T  + + +LN   +D++         Q
Sbjct: 96  KRNDTLGILRNAASMEDVKKFSRVLGDVEAYYRT--NEIKYLNRFPFDLIMGEMTGAYGQ 153

Query: 138 LLDFLGK-YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             D +          +F      +   L +   +     +N L +  +   LR     H+
Sbjct: 154 FTDAVRTCMIYDEFDIFRQKERFLKEELAILEKQPEKNEMNILSVRRQLFDLRM---EHK 210

Query: 197 KDLTMMK---NLFEKNAVSQNDLNQQERIVYKST 227
           K+L + +    L  +N ++   + +   ++  S+
Sbjct: 211 KELALNRRTLELAYENMINSLKMWEARYLIKSSS 244


>gi|167764083|ref|ZP_02436210.1| hypothetical protein BACSTE_02466 [Bacteroides stercoris ATCC
           43183]
 gi|167698199|gb|EDS14778.1| hypothetical protein BACSTE_02466 [Bacteroides stercoris ATCC
           43183]
          Length = 391

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK-- 114
           VEI+   SG I K  V+ GS + +G  L + + ++    ++  K +++  +  ++T++  
Sbjct: 57  VEIRPMVSGFITKLHVDEGSVVHKGQVLFSIDPVQYQAAVNSAKAAVETAKAAVNTQELT 116

Query: 115 -SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            S    LN K  + +   +  E QL     +     +++ N  
Sbjct: 117 VSNKRTLNQKNIISDYDLQMAENQLAQTKAQLAQAEAQLINAQ 159



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/99 (10%), Positives = 25/99 (25%), Gaps = 3/99 (3%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFAD 275
           Q +  V  +   +             ++           +   L+     L Q +   A 
Sbjct: 91  QYQAAVNSAKAAVETAKAAVNTQELTVSNKRTLNQKNIISDYDLQMAENQLAQTKAQLAQ 150

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             ++L   +      ++ SP  G +         +    
Sbjct: 151 AEAQLINAQNNLSYTSVTSPSDGIVGTIPYR-VGSLVSP 188


>gi|150008585|ref|YP_001303328.1| ABC transporter permease [Parabacteroides distasonis ATCC 8503]
 gi|149937009|gb|ABR43706.1| ABC transporter permease [Parabacteroides distasonis ATCC 8503]
          Length = 470

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 61/407 (14%), Positives = 120/407 (29%), Gaps = 107/407 (26%)

Query: 20  MTLLSIIGIIGLITWS------ILLPIEISVS-----SSGEILNEDNVVEIKSPFSGIIK 68
           + ++ I G+IG +  S      +   ++  V      +SG+++       I SP +  I 
Sbjct: 83  IAVVLIGGVIGFMQTSLQRKDLVFSTVDKGVIEVSVSASGKVVPAFE-EIINSPINSRIV 141

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +   + G  +  GTP+L  + +        +    +  R  +D  +              
Sbjct: 142 EIYKKGGDSVDVGTPILKLDLLSAETDYKKQLDEEQMKRLQLDQLR-------------- 187

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                            ++          + ++R++L  K   L
Sbjct: 188 --------------------------------IQNRNKLSEMEMQLKVSRMELNRKEVEL 215

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R             + L    A + + + Q E     S L+L+E+  + +N     +  Y
Sbjct: 216 RNE-----------RYLDSLGAGTTDKVRQVELDYNVSVLKLKEDEQKYENEKSLTDADY 264

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
               L+   + K     L + +RT  D                I SP    + Y      
Sbjct: 265 KVKELDLNIFRK----SLAETKRTLED--------------AQIRSPRKAILTYVN-NEV 305

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                Q   +  IV       I  ++       +  G  A V+          K   ++ 
Sbjct: 306 GAQVSQGSRVA-IVSDLSHFKIEGEIADTYGDRIAAGSKAVVKI------GNDKLDGVVS 358

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + P+             + V L+       DN+  LR+G   +V  
Sbjct: 359 DVTPLS------KNGVISFTVQLE------EDNHRRLRSGLKTDVYV 393


>gi|83814818|ref|YP_444862.1| putative HlyD-like secretion protein [Salinibacter ruber DSM 13855]
 gi|83756212|gb|ABC44325.1| putative HlyD-like secretion protein [Salinibacter ruber DSM 13855]
          Length = 370

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 79/243 (32%), Gaps = 38/243 (15%)

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELR---ENIHEQKNMLRHINELYDEANLEFA 256
           T+ + +     +  ++  +          ++R    +  ++  +L  IN+   +A  +  
Sbjct: 71  TVTERIRTSGTLRADESVELTAETAGKVTDIRFDEGDRVDEGALLVRINDAELQAEKDRL 130

Query: 257 NYLKEISRDLEQNQRTFADE------------------MSKLTILEKTREQKTILSPIAG 298
            +   ++ D  Q Q+   DE                   ++L ++E    +  I +P +G
Sbjct: 131 EHRLSLATDRAQRQKELLDEGGVSQEEYDATVNEVEVLRAELDLVEARIGKTQIRAPFSG 190

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +V  +  S+  Y      +  +   +    +   V+ +    V+ G + T R       
Sbjct: 191 -VVGLREVSTGAYVSPQTTIATLQ-RTDPIKLDFSVSAQYAARVQTGQSVTFRVRGLERT 248

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            E    A   ++                    L++   A + +   LR G  A+V     
Sbjct: 249 LEGTVYASNTQVSTDTR--------------TLRLRARAPNPDG-ALRPGMFADVTVPLG 293

Query: 419 NTT 421
             T
Sbjct: 294 QMT 296



 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 32/101 (31%), Gaps = 3/101 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---LN 121
           G +   + + G ++ +G  L+   D E     D  +  +         +K  LD      
Sbjct: 96  GKVTDIRFDEGDRVDEGALLVRINDAELQAEKDRLEHRLSLATDRAQRQKELLDEGGVSQ 155

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            +YD      E    +L     +   T  +    G+  +  
Sbjct: 156 EEYDATVNEVEVLRAELDLVEARIGKTQIRAPFSGVVGLRE 196


>gi|331659916|ref|ZP_08360854.1| inner membrane protein YibH [Escherichia coli TA206]
 gi|315300127|gb|EFU59365.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 16-3]
 gi|331053131|gb|EGI25164.1| inner membrane protein YibH [Escherichia coli TA206]
          Length = 378

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTAQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNADIDALPDGIYAQV 347


>gi|307311848|ref|ZP_07591486.1| secretion protein HlyD family protein [Escherichia coli W]
 gi|306907992|gb|EFN38492.1| secretion protein HlyD family protein [Escherichia coli W]
 gi|315062765|gb|ADT77092.1| predicted HlyD family secretion protein [Escherichia coli W]
 gi|323376648|gb|ADX48916.1| secretion protein HlyD family protein [Escherichia coli KO11]
          Length = 355

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 121/404 (29%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAHRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + +  + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSEERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|296271225|ref|YP_003653857.1| putative multidrug efflux system transmembrane protein
           [Thermobispora bispora DSM 43833]
 gi|296094012|gb|ADG89964.1| putative multidrug efflux system transmembrane protein
           [Thermobispora bispora DSM 43833]
          Length = 225

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 51/158 (32%), Gaps = 25/158 (15%)

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ-----SFSSSNYAQQSQPLMKI 321
            Q +   +   S L   ++     TI +P  GT++         ++   +          
Sbjct: 11  AQAKAQVSQAKSALAKAKEALAGVTIKAPADGTVLSVAGTVGTRYTGGAFLTLGDL---- 66

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                   ++A  T   I+ +K G  A V FP             +  IDP  +  D  +
Sbjct: 67  ----GDLQVKAMFTESDIRFLKVGQRAEVTFPARPGATY---SGTVAHIDPTATTSDRLV 119

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +    Y V + + D     + + L  G  A V  T   
Sbjct: 120 R----YGVTIALDD---RPDGLLL--GQTATVRVTTAE 148


>gi|291614538|ref|YP_003524695.1| efflux transporter, RND family, MFP subunit [Sideroxydans
           lithotrophicus ES-1]
 gi|291584650|gb|ADE12308.1| efflux transporter, RND family, MFP subunit [Sideroxydans
           lithotrophicus ES-1]
          Length = 393

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 83/249 (33%), Gaps = 21/249 (8%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELR 231
            I   ++    +    + LL     DL   + L ++   VSQ+ +N+       +  +  
Sbjct: 78  QISKLQVKKGQRVKKGQVLLELWDNDLHAQERLAQEQLKVSQSRVNE-----VCTLADAA 132

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +    +   LR+   +  +                   +       S++ +   T ++  
Sbjct: 133 QRDAVRSQELRNKGFISAQQLDRALTDASSKQSACNSAKGDIDQSKSRIALARATLDRMV 192

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP-----HSKLTYIRAKVTPKQIQHVKKGY 346
           + +P  G +          YA  S P +  +P          Y+ A +       +K G 
Sbjct: 193 LRAPFDGVVADISG-ELGEYATPSPPGIPTLPAIDLIDDSCMYVSAPIDEVDASKLKIGQ 251

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            + +       I+ + F   + +I P +   +   +T     V +++     ++ N  L 
Sbjct: 252 RSRITLDA---IKGRVFGGKVRRIAPYVLDLEKQART-----VEVEVEFDKLNEKNNLLV 303

Query: 407 NGFPAEVLF 415
            G+ A+V  
Sbjct: 304 -GYSADVEI 311



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 39/110 (35%), Gaps = 6/110 (5%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I K QV+ G ++ +G  LL   D +      L +  +K  +  ++   +  D     
Sbjct: 76  GGQISKLQVKKGQRVKKGQVLLELWDNDLHAQERLAQEQLKVSQSRVNEVCTLADAAQ-- 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                 A  S+E +   F+       +        S   S K  + + +S
Sbjct: 134 ----RDAVRSQELRNKGFISAQQLDRALTDASSKQSACNSAKGDIDQSKS 179


>gi|239904928|ref|YP_002951666.1| hypothetical protein DMR_02890 [Desulfovibrio magneticus RS-1]
 gi|239794791|dbj|BAH73780.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 371

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 102/274 (37%), Gaps = 31/274 (11%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             +S     + MR + +    ++    ++   +     +L +   + EK  VS+ +LN  
Sbjct: 108 EEKSAADLGSDMRRLRIISAPVQIGQHVVEDQV-LITYELPLENLMAEKQLVSRAELNGL 166

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-----SRDLEQNQRTFA 274
           E  +     +L   I  ++  L ++      A  E AN  ++I      RD  + +   A
Sbjct: 167 EHAMSVVQFQL-ATIQNRQRELENMAGNQAVAVNEVANNARDIENLLLQRDFLEEKLELA 225

Query: 275 DEM------------SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKI 321
            +              K   L+    +  + +P  G I++  S      A   Q PL+ I
Sbjct: 226 RQRYDNSVLLSQSKFGKEVDLKNLPRRGYVRAPGDGYILWLNSSLVPGMAFSKQAPLVTI 285

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                   +RA V    +Q +K G  ATV F  +   + +   + ++ +      Q   L
Sbjct: 286 GKLD-PIIVRASVHEIAMQKLKAGDPATVIFNAWPGEKFQTTISKVDYVA-----QPAML 339

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           Q   +Y +     +L   + ++ ++ G   +V+ 
Sbjct: 340 QQPSFYLI-----ELTLPNPDLRIKEGMRCDVVV 368


>gi|189465027|ref|ZP_03013812.1| hypothetical protein BACINT_01371 [Bacteroides intestinalis DSM
           17393]
 gi|189437301|gb|EDV06286.1| hypothetical protein BACINT_01371 [Bacteroides intestinalis DSM
           17393]
          Length = 390

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 82/255 (32%), Gaps = 33/255 (12%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           VEI+   SG I K  V+ G+ + +G  L + + ++    ++  K +++  +  ++T    
Sbjct: 56  VEIRPMVSGFITKLHVDEGAVVRKGQVLFSIDPVQYQAAVNSAKAAVETAKAAVNT---- 111

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                              ++L     +  +  + + NY +      L     ++     
Sbjct: 112 -------------------QELTVNNKRELNKKNIISNYDLQMAENQLAQTKAQLAQAEA 152

Query: 177 NRLDLENKSSLLRALLSSH-------QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
             ++ +N  S       S         +  +++         +  D+++       +  +
Sbjct: 153 QLVNAKNNLSYTSVTSPSDGVVGSIPYRVGSLVSPSVASPLTTVADISEMYAYFSMTERQ 212

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM--SKLTILEKTR 287
           L   I E    ++ I E   +  L+  +          +      D+   S         
Sbjct: 213 LLSQIRE-GGSIKEILERMPDVQLQLIDGTMYADSGRVETISGVIDQTTGSVTMRALFPN 271

Query: 288 EQKTILSPIAGTIVY 302
           +   + S   G +V+
Sbjct: 272 KHNVLRSGSTGNVVF 286


>gi|148974919|ref|ZP_01811899.1| hypothetical secretion protein [Vibrionales bacterium SWAT-3]
 gi|145965428|gb|EDK30677.1| hypothetical secretion protein [Vibrionales bacterium SWAT-3]
          Length = 329

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 87/274 (31%), Gaps = 43/274 (15%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNAVSQNDLNQQ 219
            S    +               ++ L  AL+      L   +   + +K  VS++D    
Sbjct: 61  NSFINLIAGQNVGAQTASIASAQAKLTSALVEKQNTQLQAKRILEMADKGVVSKSD---- 116

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                           E +  L         A  +     ++++++ E+N +  A  ++ 
Sbjct: 117 --------------ADEARAALATARANVTNAEADLERAKQQVAKEGEENSQVKAALLA- 161

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L   +   E+  I +P  G +  N S S   YA   Q +M  V      +I A      +
Sbjct: 162 LEQAQLNLERTVIKAPTQGGV-SNFSLSEGFYASAGQAIMTFVSTED-IWIEAYYRENSL 219

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKID--------------PIISQQDNNLQTQE 385
            +V  G    V         ++  K  +  ID                 SQQ   L+  +
Sbjct: 220 GNVTVGDEVEV---ALDFAPDRIVKGRVSSIDWGVDWGQNDQAGKLAQASQQTGWLRQTQ 276

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              + ++    A       LR G  A+V+  + +
Sbjct: 277 MLPITIEFEREAMQGM---LRVGGQADVIVYSGD 307


>gi|150377736|ref|YP_001314331.1| secretion protein HlyD family protein [Sinorhizobium medicae
           WSM419]
 gi|150032283|gb|ABR64398.1| secretion protein HlyD family protein [Sinorhizobium medicae
           WSM419]
          Length = 367

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/348 (12%), Positives = 101/348 (29%), Gaps = 57/348 (16%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            S    + ++    S +     +  V + ++   ++ L     + +    +     + SV
Sbjct: 48  TSQAQFQAYVVGIASEVTGRVVEVTVSDNSWVEADQVLFRIDPERYRLAVEDAEAALESV 107

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            +S+      + +   N +  +     LR   +   +       L ++   S+   +  +
Sbjct: 108 GQSIGASTATVDAAQANLVQAKADRDHLRDEYARASE-------LVKREVFSRAQYDAAK 160

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
               ++   +     E       +     +                        + ++ L
Sbjct: 161 SAYDQAEASVTAAEAELARAKEELGPAGRDN-------------------PQIREALAAL 201

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            + +       + +P AG +   Q  S        Q  M  +      +I A      ++
Sbjct: 202 ELAQLDLLHTIVRAPSAGAVTNLQL-SIGKVVSAGQAAMTFI-DIGTFWIYAAFKENSLE 259

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--------------EY 386
           +V  G  A V F            A +E +   +SQ+ ++  T               + 
Sbjct: 260 NVVAGNRAEVLFDALPGRLFP---AKVESVGAGVSQEGSDPGTGLPTIRNDSGWVREAQR 316

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNW 434
           + V L +           +R G  A V+             HPIT+ W
Sbjct: 317 FPVRLVMDGERPQG----IRYGSQATVVIYTGE--------HPITNAW 352



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 50/149 (33%), Gaps = 9/149 (6%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
           VV I S  +G + +  V + S +     L   +       ++  + +++++   I    +
Sbjct: 57  VVGIASEVTGRVVEVTVSDNSWVEADQVLFRIDPERYRLAVEDAEAALESVGQSIGASTA 116

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            +D          +A   + +   D L   ++  S++    + S         +      
Sbjct: 117 TVDA--------AQANLVQAKADRDHLRDEYARASELVKREVFS-RAQYDAAKSAYDQAE 167

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            +    E + +  +  L    +D   ++ 
Sbjct: 168 ASVTAAEAELARAKEELGPAGRDNPQIRE 196


>gi|157162962|ref|YP_001460280.1| MFP family transporter [Escherichia coli HS]
 gi|157068642|gb|ABV07897.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli HS]
          Length = 355

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKAAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|320334171|ref|YP_004170882.1| RND family efflux transporter MFP subunit [Deinococcus maricopensis
           DSM 21211]
 gi|319755460|gb|ADV67217.1| efflux transporter, RND family, MFP subunit [Deinococcus
           maricopensis DSM 21211]
          Length = 413

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    ++ + + +G +    +   + +  SG++ +  V+ G  +  G  L+  +D     
Sbjct: 49  ATRGTLDATRTVTGTVNAARDS-NVAARASGVVTRALVQEGDAVRAGQTLVQLDDTALRQ 107

Query: 95  LIDLKKVSIKNLRCHIDTEK------------SALDFLNNKYDVLEKAFESREEQLLDFL 142
             D  ++S+++ R ++   +            +      N       A  +R+   L  L
Sbjct: 108 AADSARLSLQSARINLQQARTTTAGSGTALQSAVQAAQANLQKAQATAAANRDLYALGGL 167

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            +      +       +     +  LT+  RS   +   LEN+    +  L+  + +L  
Sbjct: 168 SRADLNAGEAALAQAQADLAQARNNLTQNGRSGSGSLALLENQVQSAQVALAQAESNLAN 227

Query: 202 MK 203
            +
Sbjct: 228 AR 229



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 74/259 (28%), Gaps = 22/259 (8%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           T   +D  +     +    D+  +A         ++++    R  Q L  L    +   +
Sbjct: 50  TRGTLDATRTVTGTVNAARDSNVAARASGVVTRALVQEGDAVRAGQTLVQLD--DTALRQ 107

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             +    S+  +         +   +   L++     +A L   Q      ++L+    +
Sbjct: 108 AADSARLSLQSARINLQQARTTTAGSGTALQSAVQAAQANLQKAQATAAANRDLYALGGL 167

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S+ DLN                  E        +      NL         S  L +NQ 
Sbjct: 168 SRADLNA----------------GEAALAQAQADLAQARNNLTQNGRSGSGSLALLENQV 211

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             A     L   E       + +P AG +    +     +      + +IV       + 
Sbjct: 212 QSAQV--ALAQAESNLANARVRAPFAGVVAGVTA-KVGEFVNTGASVARIV-DPATLDVD 267

Query: 332 AKVTPKQIQHVKKGYTATV 350
             V P     +  G T T+
Sbjct: 268 FSVPPTDAVSLGAGRTVTL 286


>gi|315618700|gb|EFU99286.1| hlyD family secretion family protein [Escherichia coli 3431]
          Length = 369

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 57  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 116

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 117 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 176

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 177 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 233

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 234 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 289

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 290 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 338


>gi|331665094|ref|ZP_08365995.1| putative membrane protein [Escherichia coli TA143]
 gi|331057604|gb|EGI29590.1| putative membrane protein [Escherichia coli TA143]
          Length = 355

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|256422992|ref|YP_003123645.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
 gi|256037900|gb|ACU61444.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
          Length = 356

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 11/108 (10%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             GII++  V+ G  + QG  L     +E    +          +  +  EK+  D+   
Sbjct: 72  TGGIIQRILVKEGDAVKQGQVLAVLNPVEINAQVQ---------QAQLGFEKAQRDY--K 120

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           + D L K   +  EQL +          +V     +  +  +    + 
Sbjct: 121 RVDNLYKDSVATLEQLQNAKTALDIAGEQVKTAQFNRTHSQITATASG 168



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/143 (11%), Positives = 48/143 (33%), Gaps = 8/143 (5%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQ 237
           + +  + +    +L S +    + + L ++  AV Q  +      V     E+   + + 
Sbjct: 54  ISVSGQFTTDDEVLLSFKTGGIIQRILVKEGDAVKQGQVLAVLNPV-----EINAQVQQA 108

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +         Y   +  + + +      L+  +        ++   +  R    I +  +
Sbjct: 109 QLGFEKAQRDYKRVDNLYKDSVA-TLEQLQNAKTALDIAGEQVKTAQFNRTHSQITATAS 167

Query: 298 GTIVYNQSFSSSNYAQQSQPLMK 320
           G ++  +  S     Q   P+++
Sbjct: 168 GYVLR-KLASEGQLVQPGTPVLE 189


>gi|171692765|ref|XP_001911307.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946331|emb|CAP73132.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1522

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/198 (11%), Positives = 66/198 (33%), Gaps = 1/198 (0%)

Query: 105  NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
              R  +   +     +     +       +E +++    +     S      +  + +SL
Sbjct: 826  RSRQQLRAWRDYRRKIVIVQSLWRGKTARKEYKVVRAEARDLKQISYKLENKVVELTQSL 885

Query: 165  KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                 + + + +   + E + ++ R   ++ +     ++    +  ++   L   E  + 
Sbjct: 886  GTMKAQNKELKVQVENYEGQVAIWRNRHNALEARTKELQTEANQAGIAAARLEAMEAEMK 945

Query: 225  KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            K      E+    K M     +L +         L+   +  EQ++        ++  L+
Sbjct: 946  KLQTSFEESTANVKRMQEEERQLRESLRAT-NEELEAARQQSEQSEVEKNSLRQQIAELQ 1004

Query: 285  KTREQKTILSPIAGTIVY 302
            +  EQ    +P+ G +V 
Sbjct: 1005 EALEQARRAAPVNGELVN 1022


>gi|320644208|gb|EFX13273.1| multidrug resistance protein MdtN [Escherichia coli O157:H- str.
           493-89]
 gi|320649527|gb|EFX18051.1| multidrug resistance protein MdtN [Escherichia coli O157:H- str. H
           2687]
          Length = 343

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKSEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVVQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 42/136 (30%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  VSADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKSEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSSL 187
               LN + L+ +S+ 
Sbjct: 164 AEADLNAVLLQAQSAA 179


>gi|254415383|ref|ZP_05029144.1| hypothetical protein MC7420_3307 [Microcoleus chthonoplastes PCC
           7420]
 gi|196177858|gb|EDX72861.1| hypothetical protein MC7420_3307 [Microcoleus chthonoplastes PCC
           7420]
          Length = 407

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 55/368 (14%), Positives = 121/368 (32%), Gaps = 66/368 (17%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSI-------LLPIEISVSSSGEILNEDNVVEIKSP 62
            +  P S     L+ + G  GLI WS           I      +G ++      E+K+P
Sbjct: 9   AQTSPRSWLANILIILAG-AGLIYWSFRLLQTRLTSVISRDAIINGVLI------ELKAP 61

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLN 121
            +G + K  VE G    +   LL  ++   + L +      I   +  I+  K+ L    
Sbjct: 62  AAGEVSKLAVETGEVATKDKVLLALKNERVSQLEVQEITSRINEQKAEIERAKAQL---- 117

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                      SR+  L+  L   H   S +                 ++R    +   +
Sbjct: 118 -----------SRQLALVKILEIDHQNQSNL-----------------QVREAKQSVAQV 149

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           ++     +A     Q +      L  + A+ + +L+  +  + +S  E+       +   
Sbjct: 150 QSDLQAAQARYQLAQVNYKRTAFLTNEGALPKAELDTVKLEMQESKAEINRLNARLEAAR 209

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK----------- 290
                     +L+ ++   +    L++     AD+   +  L++T +             
Sbjct: 210 AEEKAALVGLSLDRSSSNYDPKIRLQELLLDIADQQKIIQTLQQTVKDAQAELAQAQADM 269

Query: 291 ------TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
                  + +P  G I    +     + ++   L  +V      ++   V  + ++ ++ 
Sbjct: 270 QRQQTVEVKTPTTGVIWRLNT-QKGQFVEEGDTLGNVV-DCGRRWVDVYVEERALRSLQP 327

Query: 345 GYTATVRF 352
           G  AT+  
Sbjct: 328 GTPATIEL 335


>gi|239828366|ref|YP_002950990.1| efflux transporter RND family, MFP subunit [Geobacillus sp. WCH70]
 gi|239808659|gb|ACS25724.1| efflux transporter, RND family, MFP subunit [Geobacillus sp. WCH70]
          Length = 393

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 72/231 (31%), Gaps = 2/231 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I+ +V +SG  +  +      +P  G I +  V  G ++  GTPL+ + D E    I 
Sbjct: 45  TNIKETVRTSGMTVPTERKFVYYNPQLGAIDEILVTKGQEVQIGTPLIRYVDEEVDREIH 104

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNN-KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
                 + L   I      +D+         E + E  + +      ++  T  +     
Sbjct: 105 RIARKKEQLNAQIKQLSKDIDYYKTMSSSAKEDSIEKIQWEEKAREAEHEKTLLEWQLKE 164

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                  L  K   +         +E  S      L +      +++   ++ ++ +  +
Sbjct: 165 YEEQQNELTEKKDELIVESNTAGVVEEISYDKSKPLITIASSSAIVRGKVKEESIGKLAV 224

Query: 217 NQQER-IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            Q     V      L   I +            +++   F   L E  + L
Sbjct: 225 GQAATIQVPNKNESLAGTIADIGKFPIKEANFQEKSEYPFTVQLNEQPKQL 275



 Score = 43.1 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 80/219 (36%), Gaps = 23/219 (10%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +   +  +L +  +++ +   L     V + +++++   + +   +L   I +    + +
Sbjct: 70  QLGAIDEILVTKGQEVQIGTPLIR--YVDE-EVDREIHRIARKKEQLNAQIKQLSKDIDY 126

Query: 244 INELYDEAN------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              +   A       +++    +E   +    +    +   +   L + +++  + S  A
Sbjct: 127 YKTMSSSAKEDSIEKIQWEEKAREAEHEKTLLEWQLKEYEEQQNELTEKKDELIVESNTA 186

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +       S       +PL+ I   S    +R KV  + I  +  G  AT++ P    
Sbjct: 187 GVVEEISYDKS-------KPLITI--ASSSAIVRGKVKEESIGKLAVGQAATIQVP---- 233

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
            + +     I  I     + + N Q +  Y   +++ + 
Sbjct: 234 NKNESLAGTIADIGKFPIK-EANFQEKSEYPFTVQLNEQ 271


>gi|51244006|ref|YP_063890.1| multidrug resistance protein K [Desulfotalea psychrophila LSv54]
 gi|50875043|emb|CAG34883.1| related to multidrug resistance protein K [Desulfotalea
           psychrophila LSv54]
          Length = 381

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 83/279 (29%), Gaps = 16/279 (5%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL--LRALLSSHQKDLTMMKNLFEKNAVS 212
             IS        +   +  +  N L ++ K +   L  ++ + +        L +    +
Sbjct: 62  QKISVSNTEFVDQQQILIELEQNDLLIQEKIAEANLTRIVRTVKSQYLTTGQLKDNIRAT 121

Query: 213 QNDLNQQERIVYKSTLE------LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              + + E  + +            EN+      ++      D A             + 
Sbjct: 122 DFKIAELEADLARRAGGDLDGTVTLENLQHMGQAIKIARAQRDSARQGLEAKQTIFPGEE 181

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            QN        + L  +   R   TI++P+ G I  N+S  +       QPLM ++P   
Sbjct: 182 LQNNPEIKLATAHLQEIYLARINSTIIAPMHGLI-ANRSIQAGERISPGQPLMAVIPLDN 240

Query: 327 LTYIRAKVTPKQIQHVKKGYTATV------RFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +  + A     Q+  ++ G    +      +   +  I              I ++    
Sbjct: 241 VWVV-ANFKETQLGDIRIGQAVELISDIYGKKLPFEGIIAGIGAGTGSAFSAIPAENATG 299

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              +    V +KI           LR G    V    K+
Sbjct: 300 NWIKIVQRVPVKIFISPDQIKKHPLRIGMSMTVRVDTKD 338


>gi|114332124|ref|YP_748346.1| RND family efflux transporter MFP subunit [Nitrosomonas eutropha
           C91]
 gi|114309138|gb|ABI60381.1| efflux transporter, RND family, MFP subunit [Nitrosomonas eutropha
           C91]
          Length = 401

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 66/193 (34%), Gaps = 13/193 (6%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             VEI+S  +GIIKK     G  I +G  L   +           K  +   R  ++   
Sbjct: 67  RPVEIRSQVNGIIKKIFFIEGRNIRKGDKLYLIDPTPFKAAYLGSKAMVAQARARLEQAN 126

Query: 115 SALDFLN---NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             L  +     +  V +K  +    ++        +  + V           +   +   
Sbjct: 127 KDLARVQPLLKQKAVSQKDVDDAIAEVRSAKATLDTAQNDVIKAKFDLDNTLITAPVEGR 186

Query: 172 --RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
             RS +     +E ++ LL          +  +  ++    V ++ L +  R + +  LE
Sbjct: 187 INRSQFYEGRLIEAQTDLLTT--------IDQLDPMYVNVNVPESYLLRLRRELSEHKLE 238

Query: 230 LRENIHEQKNMLR 242
             E+I + + ++ 
Sbjct: 239 RPESIFQLRGVMT 251



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 12/111 (10%), Positives = 36/111 (32%), Gaps = 2/111 (1%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               + R  + +    L  +  L  +  +   + + +   ++   + T     + +   +
Sbjct: 113 AMVAQARARLEQANKDLARVQPLLKQKAVSQKD-VDDAIAEVRSAKATLDTAQNDVIKAK 171

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +   I +P+ G I  +Q +      +    L+  +      Y+   V 
Sbjct: 172 FDLDNTLITAPVEGRINRSQFY-EGRLIEAQTDLLTTIDQLDPMYVNVNVP 221


>gi|323181120|gb|EFZ66654.1| hemolysin secretion protein D, plasmid domain protein [Escherichia
           coli 1180]
          Length = 119

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 34/72 (47%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++         +    ++ +I  +  S+L  +E+   ++G+  +     EIK   + I++
Sbjct: 45  IETPVSRRSHFVVWSILLFVIISLLLSVLGKVEVVSVANGKFTHSGRSKEIKPIENAIVE 104

Query: 69  KFQVENGSQILQ 80
           K  V++GS + +
Sbjct: 105 KIMVKDGSFVKK 116


>gi|293392242|ref|ZP_06636576.1| putative MacA [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952776|gb|EFE02895.1| putative MacA [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 394

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 48/101 (47%), Gaps = 1/101 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE +V ++G I    N V++ +  SG + K  V+ G Q+ +G  +   +     + ++
Sbjct: 40  GNIEKNVVATGSIE-SINTVDVGAQVSGKVTKLYVKLGQQVKKGDLIAEIDSTTQINTLN 98

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +K ++ + +  +   K+A D   + Y+ L K +  +   L
Sbjct: 99  TRKAALTSYQAQLVARKTAYDVALSNYNRLSKLYGQKATSL 139



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 56/176 (31%), Gaps = 27/176 (15%)

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L     +++  Q        ++   E       I SPI GT++     S       +Q  
Sbjct: 149 LNNAKAEMDVVQENIKQAEIEVNTAETNVGYTKITSPIDGTVISTPV-SEGQTVNSNQTT 207

Query: 319 MKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
             I+  +      I+ +++   I  VK G    V F   +D +   + A I+ +DP  + 
Sbjct: 208 PTIIKVADLSKMRIKPEISEGDITKVKAGQ--DVTFTILSDNKT-VYHAKIDSVDPATTT 264

Query: 377 QDNNLQTQE----------------YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             +N  +                  YY   + + +         LR G   E    
Sbjct: 265 ISDNSSSNSSSSGSGSSSGSSSSAVYYYANIIVENPEHV-----LRIGMTTENNIK 315


>gi|257487367|ref|ZP_05641408.1| hypothetical protein PsyrptA_29108 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 324

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 43/123 (34%), Gaps = 4/123 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  SV +  E++     V       G++ +F V+    +  G  LL FE+       D+
Sbjct: 191 PVRQSVLAPAEVVPLGGRVVAAPLD-GVVAEFLVKPNQVVKTGDLLLRFENTTLKAQADV 249

Query: 99  KKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            + ++      +             +++ D+L    E +  +          +  +    
Sbjct: 250 AERALGVAEAELKANSQRSFADAESSSRIDLLAARVEQKRAERDYARELLKRSEVRTERD 309

Query: 156 GIS 158
           GI+
Sbjct: 310 GIA 312


>gi|15804138|ref|NP_290177.1| hypothetical protein Z5021 [Escherichia coli O157:H7 EDL933]
 gi|15833727|ref|NP_312500.1| hypothetical protein ECs4473 [Escherichia coli O157:H7 str. Sakai]
 gi|16131468|ref|NP_418054.1| predicted protein [Escherichia coli str. K-12 substr. MG1655]
 gi|89110415|ref|AP_004195.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|157156450|ref|YP_001465074.1| membrane fusion protein family protein [Escherichia coli E24377A]
 gi|157163075|ref|YP_001460393.1| membrane fusion protein family protein [Escherichia coli HS]
 gi|168746859|ref|ZP_02771881.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. EC4113]
 gi|168753413|ref|ZP_02778420.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. EC4401]
 gi|168759687|ref|ZP_02784694.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4501]
 gi|168766009|ref|ZP_02791016.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. EC4486]
 gi|168772443|ref|ZP_02797450.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. EC4196]
 gi|168779745|ref|ZP_02804752.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. EC4076]
 gi|168785467|ref|ZP_02810474.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC869]
 gi|168797433|ref|ZP_02822440.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC508]
 gi|170083104|ref|YP_001732424.1| hypothetical protein ECDH10B_3778 [Escherichia coli str. K-12
           substr. DH10B]
 gi|170682468|ref|YP_001745895.1| auxiliary membrane fusion protein family transporter [Escherichia
           coli SMS-3-5]
 gi|188491833|ref|ZP_02999103.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 53638]
 gi|191168142|ref|ZP_03029939.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B7A]
 gi|194435780|ref|ZP_03067883.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 101-1]
 gi|195935123|ref|ZP_03080505.1| hypothetical protein EscherichcoliO157_01485 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208806736|ref|ZP_03249073.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4206]
 gi|208813895|ref|ZP_03255224.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4045]
 gi|208819965|ref|ZP_03260285.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4042]
 gi|209399731|ref|YP_002273076.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4115]
 gi|209921066|ref|YP_002295150.1| hypothetical protein ECSE_3875 [Escherichia coli SE11]
 gi|217324612|ref|ZP_03440696.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. TW14588]
 gi|218556159|ref|YP_002389072.1| hypothetical protein ECIAI1_3767 [Escherichia coli IAI1]
 gi|218702362|ref|YP_002409991.1| hypothetical protein ECIAI39_4112 [Escherichia coli IAI39]
 gi|218707230|ref|YP_002414749.1| hypothetical protein ECUMN_4108 [Escherichia coli UMN026]
 gi|238902687|ref|YP_002928483.1| hypothetical protein BWG_3287 [Escherichia coli BW2952]
 gi|253771563|ref|YP_003034394.1| secretion protein HlyD [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254038796|ref|ZP_04872848.1| membrane fusion protein family protein [Escherichia sp. 1_1_43]
 gi|254163524|ref|YP_003046632.1| hypothetical protein ECB_03452 [Escherichia coli B str. REL606]
 gi|254795551|ref|YP_003080388.1| hypothetical protein ECSP_4590 [Escherichia coli O157:H7 str.
           TW14359]
 gi|256021399|ref|ZP_05435264.1| hypothetical protein ShiD9_20930 [Shigella sp. D9]
 gi|256025673|ref|ZP_05439538.1| hypothetical protein E4_20044 [Escherichia sp. 4_1_40B]
 gi|261224221|ref|ZP_05938502.1| hypothetical protein EscherichiacoliO157_06393 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261254832|ref|ZP_05947365.1| hypothetical protein EscherichiacoliO157EcO_03292 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291284968|ref|YP_003501786.1| Inner membrane protein yibH [Escherichia coli O55:H7 str. CB9615]
 gi|293407218|ref|ZP_06651142.1| inner membrane protein yibH [Escherichia coli FVEC1412]
 gi|293413030|ref|ZP_06655698.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293417059|ref|ZP_06659686.1| inner membrane protein yibH [Escherichia coli B185]
 gi|293463921|ref|ZP_06664335.1| inner membrane protein yibH [Escherichia coli B088]
 gi|298382966|ref|ZP_06992561.1| auxiliary transporter [Escherichia coli FVEC1302]
 gi|300815168|ref|ZP_07095393.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 107-1]
 gi|300822365|ref|ZP_07102505.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 119-7]
 gi|300898690|ref|ZP_07117003.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 198-1]
 gi|300907637|ref|ZP_07125266.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 84-1]
 gi|300923376|ref|ZP_07139419.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 182-1]
 gi|300929825|ref|ZP_07145273.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 187-1]
 gi|300937210|ref|ZP_07152060.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 21-1]
 gi|300948075|ref|ZP_07162212.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 116-1]
 gi|300954513|ref|ZP_07166961.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 175-1]
 gi|301307164|ref|ZP_07213191.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 124-1]
 gi|301325272|ref|ZP_07218784.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 78-1]
 gi|301644258|ref|ZP_07244263.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 146-1]
 gi|307140295|ref|ZP_07499651.1| Inner membrane protein yibH [Escherichia coli H736]
 gi|307315245|ref|ZP_07594823.1| secretion protein HlyD family protein [Escherichia coli W]
 gi|309797464|ref|ZP_07691855.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 145-7]
 gi|312972122|ref|ZP_07786296.1| hlyD family secretion family protein [Escherichia coli 1827-70]
 gi|331644314|ref|ZP_08345443.1| inner membrane protein YibH [Escherichia coli H736]
 gi|331665220|ref|ZP_08366121.1| inner membrane protein YibH [Escherichia coli TA143]
 gi|331670438|ref|ZP_08371277.1| inner membrane protein YibH [Escherichia coli TA271]
 gi|331675082|ref|ZP_08375839.1| inner membrane protein YibH [Escherichia coli TA280]
 gi|331679687|ref|ZP_08380357.1| inner membrane protein YibH [Escherichia coli H591]
 gi|332282635|ref|ZP_08395048.1| membrane fusion protein family protein [Shigella sp. D9]
 gi|84028005|sp|P0AFV1|YIBH_ECO57 RecName: Full=Inner membrane protein yibH
 gi|84028006|sp|P0AFV0|YIBH_ECOLI RecName: Full=Inner membrane protein yibH
 gi|12518339|gb|AAG58741.1|AE005586_6 putative membrane protein [Escherichia coli O157:H7 str. EDL933]
 gi|466735|gb|AAB18574.1| alternate gene name yibH [Escherichia coli str. K-12 substr.
           MG1655]
 gi|1790024|gb|AAC76621.1| predicted protein [Escherichia coli str. K-12 substr. MG1655]
 gi|1857028|gb|AAC95068.1| unknown [Escherichia coli]
 gi|13363948|dbj|BAB37896.1| putative membrane protein [Escherichia coli O157:H7 str. Sakai]
 gi|85676446|dbj|BAE77696.1| hypothetical protein [Escherichia coli str. K12 substr. W3110]
 gi|157068755|gb|ABV08010.1| membrane fusion protein (MFP) (TC 8.A.1) family [Escherichia coli
           HS]
 gi|157078480|gb|ABV18188.1| membrane fusion protein (MFP) (TC 8.A.1) family [Escherichia coli
           E24377A]
 gi|169890939|gb|ACB04646.1| predicted protein [Escherichia coli str. K-12 substr. DH10B]
 gi|170520186|gb|ACB18364.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia coli SMS-3-5]
 gi|187771528|gb|EDU35372.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. EC4196]
 gi|188018414|gb|EDU56536.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. EC4113]
 gi|188487032|gb|EDU62135.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 53638]
 gi|189002533|gb|EDU71519.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. EC4076]
 gi|189359223|gb|EDU77642.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. EC4401]
 gi|189364522|gb|EDU82941.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. EC4486]
 gi|189369791|gb|EDU88207.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4501]
 gi|189374450|gb|EDU92866.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC869]
 gi|189380035|gb|EDU98451.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC508]
 gi|190901811|gb|EDV61563.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B7A]
 gi|194425323|gb|EDX41307.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 101-1]
 gi|208726537|gb|EDZ76138.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4206]
 gi|208735172|gb|EDZ83859.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4045]
 gi|208740088|gb|EDZ87770.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4042]
 gi|209161131|gb|ACI38564.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4115]
 gi|209754948|gb|ACI75786.1| putative membrane protein [Escherichia coli]
 gi|209754950|gb|ACI75787.1| putative membrane protein [Escherichia coli]
 gi|209754952|gb|ACI75788.1| putative membrane protein [Escherichia coli]
 gi|209754954|gb|ACI75789.1| putative membrane protein [Escherichia coli]
 gi|209754956|gb|ACI75790.1| putative membrane protein [Escherichia coli]
 gi|209914325|dbj|BAG79399.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|217320833|gb|EEC29257.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. TW14588]
 gi|218362927|emb|CAR00564.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|218372348|emb|CAR20220.1| conserved hypothetical protein [Escherichia coli IAI39]
 gi|218434327|emb|CAR15249.1| conserved hypothetical protein [Escherichia coli UMN026]
 gi|226838761|gb|EEH70788.1| membrane fusion protein family protein [Escherichia sp. 1_1_43]
 gi|238862934|gb|ACR64932.1| predicted protein [Escherichia coli BW2952]
 gi|242379118|emb|CAQ33920.1| putative membrane protein [Escherichia coli BL21(DE3)]
 gi|253322607|gb|ACT27209.1| secretion protein HlyD family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975425|gb|ACT41096.1| hypothetical protein ECB_03452 [Escherichia coli B str. REL606]
 gi|253979581|gb|ACT45251.1| hypothetical protein ECD_03452 [Escherichia coli BL21(DE3)]
 gi|254594951|gb|ACT74312.1| predicted protein [Escherichia coli O157:H7 str. TW14359]
 gi|260447385|gb|ACX37807.1| secretion protein HlyD family protein [Escherichia coli DH1]
 gi|284923630|emb|CBG36727.1| HlyD-family secretion protein [Escherichia coli 042]
 gi|290764841|gb|ADD58802.1| Inner membrane protein yibH [Escherichia coli O55:H7 str. CB9615]
 gi|291321553|gb|EFE60989.1| inner membrane protein yibH [Escherichia coli B088]
 gi|291426029|gb|EFE99063.1| inner membrane protein yibH [Escherichia coli FVEC1412]
 gi|291431090|gb|EFF04083.1| inner membrane protein yibH [Escherichia coli B185]
 gi|291468677|gb|EFF11170.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298276802|gb|EFI18320.1| auxiliary transporter [Escherichia coli FVEC1302]
 gi|300318511|gb|EFJ68295.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 175-1]
 gi|300357653|gb|EFJ73523.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 198-1]
 gi|300400645|gb|EFJ84183.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 84-1]
 gi|300420349|gb|EFK03660.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 182-1]
 gi|300452375|gb|EFK15995.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 116-1]
 gi|300457722|gb|EFK21215.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 21-1]
 gi|300462248|gb|EFK25741.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 187-1]
 gi|300525012|gb|EFK46081.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 119-7]
 gi|300532060|gb|EFK53122.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 107-1]
 gi|300837639|gb|EFK65399.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 124-1]
 gi|300847876|gb|EFK75636.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 78-1]
 gi|301077401|gb|EFK92207.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 146-1]
 gi|306905377|gb|EFN35915.1| secretion protein HlyD family protein [Escherichia coli W]
 gi|308118900|gb|EFO56162.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 145-7]
 gi|309704000|emb|CBJ03346.1| HlyD-family secretion protein [Escherichia coli ETEC H10407]
 gi|310334499|gb|EFQ00704.1| hlyD family secretion family protein [Escherichia coli 1827-70]
 gi|315062885|gb|ADT77212.1| secretion protein HlyD family protein [Escherichia coli W]
 gi|315138178|dbj|BAJ45337.1| inner membrane protein yibH [Escherichia coli DH1]
 gi|315253983|gb|EFU33951.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 85-1]
 gi|320191350|gb|EFW66000.1| Multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC1212]
 gi|320201376|gb|EFW75957.1| Multidrug resistance protein A [Escherichia coli EC4100B]
 gi|320639503|gb|EFX09111.1| Inner membrane protein yibH [Escherichia coli O157:H7 str. G5101]
 gi|320644942|gb|EFX13972.1| Inner membrane protein yibH [Escherichia coli O157:H- str. 493-89]
 gi|320650209|gb|EFX18698.1| Inner membrane protein yibH [Escherichia coli O157:H- str. H 2687]
 gi|320655561|gb|EFX23489.1| Inner membrane protein yibH [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320666309|gb|EFX33308.1| Inner membrane protein yibH [Escherichia coli O157:H7 str. LSU-61]
 gi|323173186|gb|EFZ58815.1| hlyD family secretion family protein [Escherichia coli LT-68]
 gi|323182625|gb|EFZ68028.1| hlyD family secretion family protein [Escherichia coli 1357]
 gi|323376522|gb|ADX48790.1| secretion protein HlyD family protein [Escherichia coli KO11]
 gi|323934858|gb|EGB31240.1| HlyD family protein secretion protein [Escherichia coli E1520]
 gi|323939644|gb|EGB35850.1| HlyD family protein secretion protein [Escherichia coli E482]
 gi|323944240|gb|EGB40318.1| HlyD family protein secretion protein [Escherichia coli H120]
 gi|323959845|gb|EGB55493.1| HlyD family protein secretion protein [Escherichia coli H489]
 gi|323971239|gb|EGB66484.1| HlyD family protein secretion protein [Escherichia coli TA007]
 gi|323975110|gb|EGB70216.1| HlyD family protein secretion protein [Escherichia coli TW10509]
 gi|324019757|gb|EGB88976.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 117-3]
 gi|324116064|gb|EGC09990.1| HlyD family protein secretion protein [Escherichia coli E1167]
 gi|326337403|gb|EGD61238.1| Multidrug resistance protein A [Escherichia coli O157:H7 str. 1044]
 gi|326339928|gb|EGD63735.1| Multidrug resistance protein A [Escherichia coli O157:H7 str. 1125]
 gi|331036608|gb|EGI08834.1| inner membrane protein YibH [Escherichia coli H736]
 gi|331057730|gb|EGI29716.1| inner membrane protein YibH [Escherichia coli TA143]
 gi|331062500|gb|EGI34420.1| inner membrane protein YibH [Escherichia coli TA271]
 gi|331067991|gb|EGI39389.1| inner membrane protein YibH [Escherichia coli TA280]
 gi|331072859|gb|EGI44184.1| inner membrane protein YibH [Escherichia coli H591]
 gi|332104987|gb|EGJ08333.1| membrane fusion protein family protein [Shigella sp. D9]
          Length = 378

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 347


>gi|329846700|ref|ZP_08261973.1| cation efflux system protein cusB [Asticcacaulis biprosthecum C19]
 gi|328844207|gb|EGF93775.1| cation efflux system protein cusB [Asticcacaulis biprosthecum C19]
          Length = 493

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 51/195 (26%), Gaps = 39/195 (20%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-------TILSPIAGTIVYN 303
           A  E+    +     LE+  R     +     L     +        TI +P+ G I   
Sbjct: 169 AQSEYLAVRRTADPALERAARQRLTLLGMSQGLIDQVSRSGKPNTIVTISTPVGGAIQTL 228

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                       Q L + V      ++ A V       V  G     +   +     + F
Sbjct: 229 DVR-QGMTVNSGQTLAQ-VSGLSSVWLNAAVPEALASQVSLGQPVKAKLAAFP---GESF 283

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF-------------- 409
              +  I P        L       V ++      ++ N  LR G               
Sbjct: 284 SGKVSAILPTAQSDTRTLS------VRVE-----LANRNGRLRPGMYATVHFPGNTSTAL 332

Query: 410 --PAEVLFTAKNTTL 422
             P+E +      T+
Sbjct: 333 SVPSEAVIRTGKRTI 347


>gi|325266112|ref|ZP_08132796.1| acriflavin resistance protein A [Kingella denitrificans ATCC 33394]
 gi|324982342|gb|EGC17970.1| acriflavin resistance protein A [Kingella denitrificans ATCC 33394]
          Length = 359

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 51/383 (13%), Positives = 98/383 (25%), Gaps = 84/383 (21%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +    S+G +  E    ++ S ++G ++   V+ GS++  G  L        +  ++   
Sbjct: 39  DNIAVSNGRLELE--RYDVASLYAGRVQNVLVDEGSEVKAGDVLAELSSDIASGKVEEAM 96

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 R                            E +L            V        
Sbjct: 97  AGESAAR----------------------------ETVLRAQAAVRQAQEAVARADAQIA 128

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            +  + K+ +M      RL  E+  S         Q+D                      
Sbjct: 129 AQQQQQKVAQMELDNAGRLQSEDLVSPAETQRRRSQRDGA-------------------- 168

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                +    +    E   M+R       EA    A    ++                  
Sbjct: 169 ---AAAVKAAQAAKSEALAMVRQAQAGVAEAQAGVAARQAQV------------------ 207

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQI 339
              E  +    I SP  G +   +   + +       ++ ++ P      I   +   Q 
Sbjct: 208 KTAESAQSDMKITSPKDGRV-EYRIAETGSVIAAGSKVISLIDPSDASMNI--FLPNAQA 264

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKIT 394
             +K G  A +       +    F A I  I         + +  N + +  ++V LKI 
Sbjct: 265 AVLKVGDEARIVLDGLDAV----FPAKISFIATNAQFTPKAVETANERAKLMFKVKLKIP 320

Query: 395 DLAFSDNNIELRNGFPAEVLFTA 417
                  N  L+ G         
Sbjct: 321 ADIALKYNRLLKGGMTGNGYVRT 343


>gi|304407734|ref|ZP_07389385.1| efflux transporter, RND family, MFP subunit [Paenibacillus
           curdlanolyticus YK9]
 gi|304343217|gb|EFM09060.1| efflux transporter, RND family, MFP subunit [Paenibacillus
           curdlanolyticus YK9]
          Length = 516

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 66/200 (33%), Gaps = 23/200 (11%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            + K+ L L++   +  ++ +   E Y  ++   +    +  +  D+E      AD   +
Sbjct: 100 QIAKAELNLKKQDLQLASLKKQYIEAYGDEDRQADIKLQIDSLRLDIESANLELADLKEQ 159

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
              +       ++++P  GT+      +  +   +S+ + +IV           V    I
Sbjct: 160 EAAIP------SVVAPSDGTVTTASV-AVGDQLNESKVIAEIV-DYSKLQFTMNVDELDI 211

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +K G  A +          +     +  I    +Q+ ++      Y V + +  L   
Sbjct: 212 PKIKVGQAADIVLNALP---TEALTGKVLSI----AQEGSSSNGSASYAVTVSLDKLT-- 262

Query: 400 DNNIELRNGFPAEVLFTAKN 419
                +  G   E      +
Sbjct: 263 ----GVIAGMSGEASVITAS 278



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 10/102 (9%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK---------- 114
           G + K   + G ++ +G  L+ FE  + T+ I   ++++K     + + K          
Sbjct: 70  GKVSKVNFKAGDKVKKGQLLIAFEQEDYTNQIAKAELNLKKQDLQLASLKKQYIEAYGDE 129

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
                +  + D L    ES   +L D   +  +  S V    
Sbjct: 130 DRQADIKLQIDSLRLDIESANLELADLKEQEAAIPSVVAPSD 171


>gi|288937346|ref|YP_003441405.1| secretion protein HlyD [Klebsiella variicola At-22]
 gi|290512747|ref|ZP_06552113.1| membrane fusion protein (MFP) family auxiliary transporter
           [Klebsiella sp. 1_1_55]
 gi|288892055|gb|ADC60373.1| secretion protein HlyD family protein [Klebsiella variicola At-22]
 gi|289775088|gb|EFD83090.1| membrane fusion protein (MFP) family auxiliary transporter
           [Klebsiella sp. 1_1_55]
          Length = 355

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 79/217 (36%), Gaps = 24/217 (11%)

Query: 17  LKRMTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
             R   +SI   +G+  W I+     P+    +    +    + V      SG +    V
Sbjct: 8   FARWVRVSIAAFLGIFAWFIVADIWIPLTPDSTVMRVVTPVSSRV------SGYVSHVYV 61

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            N SQ+ +G  L   +     + ++  +++++     +  ++        + ++    + 
Sbjct: 62  HNNSQVKKGDLLYELDPTPFINKVEAAQIALEQ--AKLSNQQLDAQIAAARANLRTAQYT 119

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSV-------YRSLKMKLTRMRSIYLNRLDLENKS 185
           +R +++     +  ST   V    +  V        +S+     +++++ + R + ++K 
Sbjct: 120 ARNDKVTLDRYQRLSTMQNVSQSDLDKVRTTWQTSEQSVSALNAQIQNLLIQRGERDDKR 179

Query: 186 ----SLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLN 217
                  R  L   Q +L   +   E    VS   LN
Sbjct: 180 NVTLQKYRNALEEAQLNLAWTQVRAETDGMVSNLQLN 216



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 45/154 (29%), Gaps = 18/154 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   + +   +L+      + +              +    + +  L   + L     VS
Sbjct: 81  FINKVEAAQIALEQAKLSNQQLDAQIAAARANLRTAQYTARNDKVTLDRYQRLSTMQNVS 140

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q+DL++       S   +     + +N+L    E  D+ N+    Y       LE+ Q  
Sbjct: 141 QSDLDKVRTTWQTSEQSVSALNAQIQNLLIQRGERDDKRNVTLQKYRN----ALEEAQLN 196

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            A                 + +   G +   Q  
Sbjct: 197 LA--------------WTQVRAETDGMVSNLQLN 216


>gi|260166962|ref|ZP_05753773.1| secretion protein HlyD family protein [Brucella sp. F5/99]
          Length = 235

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 55/175 (31%), Gaps = 15/175 (8%)

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           AN   +      +  R F        I  +     ++ +P  G I  N S    +     
Sbjct: 62  ANLYAKPQDIRAEILRRFQFSRIVCVIAARDLSFTSLRAPFDGVI-GNLSGKKGDLVAPG 120

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII- 374
           Q +  +VP     YI A     Q+ H+K G TA +        +   F   +  I P   
Sbjct: 121 QKIAALVPVD-QLYIDANFKETQLAHIKVGETAHIYVDAIDGTK---FDGKVASIAPASG 176

Query: 375 -------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
                   +      T+    V ++IT    +  + ++R G    V       T 
Sbjct: 177 AVFSLLPPENATGNFTKVVQRVPVRITIPKEAFESGKIRAGLSVIVDVDT--RTA 229


>gi|224536750|ref|ZP_03677289.1| hypothetical protein BACCELL_01626 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521666|gb|EEF90771.1| hypothetical protein BACCELL_01626 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 390

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 82/255 (32%), Gaps = 33/255 (12%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           VEI+   SG I K  V+ GS + +G  L + + ++    ++  K +++  +  ++T    
Sbjct: 56  VEIRPMVSGFITKLHVDEGSVVRKGQVLFSIDPVQYQAAVNSAKAAVETAKAAVNT---- 111

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                              ++L     +  +  + + NY +      L     ++     
Sbjct: 112 -------------------QELTVNNKRELNKKNIISNYDLQMAENQLAQTKAQLAQAEA 152

Query: 177 NRLDLENKSSLLRALLSSH-------QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
             ++ +N  S       S         +  +++         +  D+++       +  +
Sbjct: 153 QLVNAKNNLSYTSVTSPSDGVVGNIPYRVGSLVSPSVANPLTTVADISEMYAYFSMTERQ 212

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM--SKLTILEKTR 287
           L   I E    ++ I E   +  L+  +          +      D+   S         
Sbjct: 213 LLSQIRE-GGSIKEILERMPDVQLQLIDGTMYADSGRVETISGVIDQATGSVTMRALFPN 271

Query: 288 EQKTILSPIAGTIVY 302
           +   + S   G +V+
Sbjct: 272 KHNVLRSGSTGNVVF 286



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 29/99 (29%), Gaps = 3/99 (3%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN--YLKEISRDLEQNQRTFAD 275
           Q +  V  +   +             +N   +       +   L+     L Q +   A 
Sbjct: 90  QYQAAVNSAKAAVETAKAAVNTQELTVNNKRELNKKNIISNYDLQMAENQLAQTKAQLAQ 149

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             ++L   +      ++ SP  G +V N  +   +    
Sbjct: 150 AEAQLVNAKNNLSYTSVTSPSDG-VVGNIPYRVGSLVSP 187


>gi|206579992|ref|YP_002240650.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|206569050|gb|ACI10826.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
          Length = 355

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 79/217 (36%), Gaps = 24/217 (11%)

Query: 17  LKRMTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
             R   +SI   +G+  W I+     P+    +    +    + V      SG +    V
Sbjct: 8   FARWVRVSIAAFLGIFAWFIVADIWIPLTPDSTVMRVVTPVSSRV------SGYVSHVYV 61

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            N SQ+ +G  L   +     + ++  +++++     +  ++        + ++    + 
Sbjct: 62  HNNSQVKKGDLLYELDPTPFINKVEAAQIALEQ--AKLSNQQLDAQIAAARANLRTAQYT 119

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSV-------YRSLKMKLTRMRSIYLNRLDLENKS 185
           +R +++     +  ST   V    +  V        +S+     +++++ + R + ++K 
Sbjct: 120 ARNDKVTLDRYQRLSTMQNVSQSDLDKVRTTWQTSEQSVSALNAQIQNLLIQRGERDDKR 179

Query: 186 ----SLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLN 217
                  R  L   Q +L   +   E    VS   LN
Sbjct: 180 NVTLQKYRNALEEAQLNLAWTQVRAETDGMVSNLQLN 216



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 45/154 (29%), Gaps = 18/154 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   + +   +L+      + +              +    + +  L   + L     VS
Sbjct: 81  FINKVEAAQIALEQAKLSNQQLDAQIAAARANLRTAQYTARNDKVTLDRYQRLSTMQNVS 140

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q+DL++       S   +     + +N+L    E  D+ N+    Y       LE+ Q  
Sbjct: 141 QSDLDKVRTTWQTSEQSVSALNAQIQNLLIQRGERDDKRNVTLQKYRN----ALEEAQLN 196

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            A                 + +   G +   Q  
Sbjct: 197 LA--------------WTQVRAETDGMVSNLQLN 216


>gi|160877522|ref|YP_001556838.1| secretion protein HlyD family protein [Shewanella baltica OS195]
 gi|160863044|gb|ABX51578.1| secretion protein HlyD family protein [Shewanella baltica OS195]
 gi|315269719|gb|ADT96572.1| secretion protein HlyD family protein [Shewanella baltica OS678]
          Length = 287

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 52/170 (30%), Gaps = 20/170 (11%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           I+ +L +     A   ++L   +    +  I +P  GT++     +  NY  +   +  +
Sbjct: 126 INTELARTSYELAQ--AQLNTAKIDLARTQIHAPENGTLINLSLRN-GNYVSKGNSVFSL 182

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V      YI       +I  V  G  A V       +        +  I   I+  +   
Sbjct: 183 VKQDS-LYITGYFEETKIPLVHIGQNADVSLMSGGQV----LHGKVTSIGKAIANTNVTT 237

Query: 382 QTQEYYEV-----------ILKIT-DLAFSDNNIELRNGFPAEVLFTAKN 419
             Q   ++            + +  +L     +IEL  G    +      
Sbjct: 238 NGQLLPQIGQTFNWVRLSQRIPVDIELDSIPKDIELSVGMTVSIQLQTDK 287



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 50/150 (33%), Gaps = 7/150 (4%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + ++++ GI G   WS    +    +  G +  E  ++ I     G + +  V++   + 
Sbjct: 11  LIVVAVAGIAGHWIWSHY--LYSPWTRDGRVRAE--IITIAPDVYGWVNQLNVKDNQIVN 66

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREE 136
           +G  L T +D      I       ++ +   +  K        L N   V ++ F+    
Sbjct: 67  KGDVLFTVDDTRYKATIAELNAKAESQKLAWELAKHKYKRRIGLTNDNLVSKETFDEAFI 126

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                   Y    +++    I      +  
Sbjct: 127 NTELARTSYELAQAQLNTAKIDLARTQIHA 156


>gi|114569371|ref|YP_756051.1| secretion protein HlyD family protein [Maricaulis maris MCS10]
 gi|114339833|gb|ABI65113.1| secretion protein HlyD family protein [Maricaulis maris MCS10]
          Length = 342

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 85/260 (32%), Gaps = 31/260 (11%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST-LEL 230
           R       ++  + S L     +  ++  ++  L +  A  Q DL   +R    +    L
Sbjct: 98  RRQATVSAEITGRISELLVEEGARVEEGQILARLDDTRARIQLDLLIAQRNAAAARPHSL 157

Query: 231 RENIHEQKNMLRHIN-----ELYDEANLEFANYLKE-ISRDLEQNQRTFADEMSKLTILE 284
              + E + +L         E+  EA +  A    E ++  +E  +  +    +++   E
Sbjct: 158 IAQLAEAQRVLERARTLAEREIGSEAAVTAARTQFESLTAQIEAARADYQAVAAQVRAQE 217

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--------LMKIVPHSKLTYIRAKVTP 336
              ++  + SP  G ++   +                    +  +V   +   I   V  
Sbjct: 218 DLIDRHIVRSPFTGIVIAKNA-QVGEILFPGSAGGGFTRTGVATLV-DMESLEIEVDVNE 275

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
            QI  V  G     R   Y D R    +A +E I P   +    +       V +     
Sbjct: 276 GQIGRVTPGQRVEARLDAYPDWR---IRAHVEAIIPTADRARATIT------VRV----- 321

Query: 397 AFSDNNIELRNGFPAEVLFT 416
           AF + +  +     + V+F 
Sbjct: 322 AFDERDGRILPDMASRVIFV 341



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/206 (10%), Positives = 60/206 (29%), Gaps = 5/206 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
              + ++G I+       + +  +G I +  VE G+++ +G  L   +D      +DL  
Sbjct: 86  SSGLVATGYIVARRQA-TVSAEITGRISELLVEEGARVEEGQILARLDDTRARIQLDLLI 144

Query: 101 VSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                       +  + +    +  +   L +     E  +     ++ S  +++     
Sbjct: 145 AQRNAAAARPHSLIAQLAEAQRVLERARTLAEREIGSEAAVTAARTQFESLTAQIEAARA 204

Query: 158 S-SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                 +       +   ++ R           A +       +           +  D+
Sbjct: 205 DYQAVAAQVRAQEDLIDRHIVRSPFTGIVIAKNAQVGEILFPGSAGGGFTRTGVATLVDM 264

Query: 217 NQQERIVYKSTLELRENIHEQKNMLR 242
              E  V  +  ++      Q+   R
Sbjct: 265 ESLEIEVDVNEGQIGRVTPGQRVEAR 290


>gi|30249075|ref|NP_841145.1| hypothetical protein NE1082 [Nitrosomonas europaea ATCC 19718]
 gi|30138692|emb|CAD84993.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
          Length = 398

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 53/134 (39%), Gaps = 3/134 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV++ G +      VEI +  SG I +  VE G  + +G  L   +       +D  
Sbjct: 48  IEASVAAIGTLQP-LKSVEIGAQVSGQIMRLHVEVGDTVEKGQLLAEIDARVHQATVDAG 106

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +  LR  +  +++  +    +Y   ++  +    +L D   +  +   K     I  
Sbjct: 107 RAQLAGLRAQLADQRAQHELAKQQYARQQQMEKDDATRLEDV--QVAAAALKSAAARIDQ 164

Query: 160 VYRSLKMKLTRMRS 173
           +   ++   + ++ 
Sbjct: 165 LRAQIQQVSSTLKG 178



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 70/212 (33%), Gaps = 23/212 (10%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++  EL +  + ++  +   +    E     A  LK  +  ++Q +      
Sbjct: 113 LRAQLADQRAQHELAKQQYARQQQMEKDDATRLEDVQVAAAALKSAAARIDQLRAQIQQV 172

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPHSKLTYIRAKV 334
            S L   E       I +PIAG +V   +         +  +  +  V       +   V
Sbjct: 173 SSTLKGNETLLGFTRIYAPIAGVVVGVDA-KEGQTLNATYQIPTVLRVADLTRMTVWTDV 231

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--------- 385
           +   I+ +K G      F      R +++ + + +I P   Q        +         
Sbjct: 232 SEADIRQIKAGMPVY--FTTLGGDR-RRWHSTVRQILPAPPQAVPAQGGGDNNKTPAAGT 288

Query: 386 ---YYEVILKITDLAFSDNNIELRNGFPAEVL 414
               Y V+  +      +++ EL     A+V+
Sbjct: 289 KAVQYTVLFDVD-----NSDGELMPQMTAQVI 315


>gi|312129286|ref|YP_003996626.1| efflux transporter, rnd family, mfp subunit [Leadbetterella
           byssophila DSM 17132]
 gi|311905832|gb|ADQ16273.1| efflux transporter, RND family, MFP subunit [Leadbetterella
           byssophila DSM 17132]
          Length = 414

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 96/289 (33%), Gaps = 77/289 (26%)

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G +++  VE+G+ + +G P+L   + +                              
Sbjct: 78  LEGGRVEEKFVEDGAIMKKGDPILRLGNTD------------------------------ 107

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                LE +  S+E Q+ + L + + + +      I  +                     
Sbjct: 108 -----LELSLASQETQVYNVLTQMNISKNNATQNTILKL--------------------- 141

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            N+ + +   L   ++   + K L +   +SQ D  Q E            N+++ +   
Sbjct: 142 -NQMAEVDNALKEAERVYLLNKKLHQDRLISQQDFQQSE------------NLYQYQLRR 188

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           + + +     + E  + +++      Q++ +     + L ++ K      + +PI G + 
Sbjct: 189 KKLTDEILSQDKEVIDLMQK------QDKESLQKMQNTLALMRKKVSDLIVRAPIDGRLT 242

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
              +        + + L +I   +    IRA +    I  +  G  ATV
Sbjct: 243 SLDA-EIGQLKNKGERLGQI-DVTDGYKIRADIDEHYINRIFPGLPATV 289


>gi|294651102|ref|ZP_06728438.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292822996|gb|EFF81863.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 386

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 63/202 (31%), Gaps = 7/202 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +  + +  ++G+I    W    P   +V   G +  E   + I +     I++F V  G 
Sbjct: 66  IGLIIVFILLGLIAYGLWKAYQP--QAVELQGRVEAET--IHISTKVPSRIEEFYVTEGQ 121

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            + +G  L+ F   E     +  + ++++      T        N +           + 
Sbjct: 122 AVKKGQELIRFVSPELEAKKEQAQAALQSAMAFQSTVYRGSQQENIETLYANWQALKTQA 181

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +L       +     ++  G+ S  R  +M   +  +        +  +   R      +
Sbjct: 182 ELA---ATTYKRGENLYQQGVISRQRRDEMLAAQTSARETAEASYQQYARAKRGSTEQQK 238

Query: 197 KDLTMMKNLFEKNAVSQNDLNQ 218
                   + +      N L +
Sbjct: 239 STADAKVAMAQAAVKEANALTE 260


>gi|238759009|ref|ZP_04620180.1| HlyD family secretion protein [Yersinia aldovae ATCC 35236]
 gi|238702820|gb|EEP95366.1| HlyD family secretion protein [Yersinia aldovae ATCC 35236]
          Length = 352

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 92/288 (31%), Gaps = 26/288 (9%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                L   +    S++       +V E +   R + L       +    +     +   
Sbjct: 45  SEDAELGASVVHIASSVPGRIISVNVEENSKVRRGDLLFSIEPNLYRLRVEQAQAELKMA 104

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +   +   + +   N      +    +A L    + L  ++ L  K  V+   ++   
Sbjct: 105 EAARDTQRRTVIAEQSNAAITNEQIVRAQANLKLATQTLARLQPLLPKGYVTAQQVDDAV 164

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
              + + + L++ + +       ++                        +       + L
Sbjct: 165 TAKHDAEVSLKQALKQSFAAEALVSST-------------------AAAEALVVARRAAL 205

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            I E+      I +P  G +V     S+  +    Q +  ++ +++  +  A     +++
Sbjct: 206 AIAERELANTQIRAPHDGRVVGL-IVSAGEFVIPDQAIFTLI-NTEHWHAVAFFRETELK 263

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD--NNLQTQEY 386
           H+K G  ATV        R++  +  +E I   +S +D  N  +   Y
Sbjct: 264 HIKVGDCATVYVMA---DRQRVIQGRVEGIGWGVSSEDMLNIPRGLPY 308



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 57/165 (34%), Gaps = 2/165 (1%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
           VV I S   G I    VE  S++ +G  L + E       ++  +  +K      DT++ 
Sbjct: 54  VVHIASSVPGRIISVNVEENSKVRRGDLLFSIEPNLYRLRVEQAQAELKMAEAARDTQRR 113

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            +    +   +  +     +  L             +    +++  + +   +T      
Sbjct: 114 TVIAEQSNAAITNEQIVRAQANLKLATQTLARLQPLLPKGYVTA--QQVDDAVTAKHDAE 171

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           ++      +S    AL+SS      ++       A+++ +L   +
Sbjct: 172 VSLKQALKQSFAAEALVSSTAAAEALVVARRAALAIAERELANTQ 216


>gi|170746818|ref|YP_001753078.1| hypothetical protein Mrad2831_0373 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170653340|gb|ACB22395.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
           2831]
          Length = 416

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/389 (11%), Positives = 123/389 (31%), Gaps = 20/389 (5%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P + + M +L  + ++     ++L       S  G +        + +P  G++     +
Sbjct: 2   PWNSRWMRVLVGVLLLSAAILAVLPSFTGYTSLDGTV--NARFAVVSAPIEGVVSDTPPK 59

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G          T    +T+          +     +D + +A        ++  K   +
Sbjct: 60  VG----------TALPEDTSVFFINNGRIARTAEAQLDADLAASKEKLRALELQAKDLSA 109

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            +  L+  L +Y           I    + +        S   +    +   +      S
Sbjct: 110 LKTDLIGRLREYQQASIVSIQQEIIIRQQRIATAQANKTSAEADLARKQTLGATGVVAGS 169

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           S ++          +  +++ +L + +R +    L+    + E +N + +  +  DE  +
Sbjct: 170 SVEQARAASVGAGSEQNIAKAELERLQRQL--DALKRGTFVGEGRNDVPYSQQRIDEVTI 227

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + AN   +I  +  + Q   + ++S             +  P  G I  N   +  +   
Sbjct: 228 QLANVEAQIRIEKARTQ-QLSLQLSLERSRNDRLSFVAVQIPFKGVIWRNNVVA-GSNVL 285

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK---FKAIIEKI 370
               LM+++   +  ++   V       +K G +A VR    + +   +    +     +
Sbjct: 286 VGNELMRLL-DCRDLFVDILVDEVNYDEIKPGDSADVRLLGTSQVIPGRVLSVRGSAAAV 344

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFS 399
           + ++          +   + + +      
Sbjct: 345 EEVVLAAIPPQSRGKNARIRVALDPSDMQ 373


>gi|215918873|ref|NP_819101.2| auxiliary transport protein, membrane fusion protein family
           [Coxiella burnetii RSA 493]
 gi|206583758|gb|AAO89615.2| periplasmic component of efflux system [Coxiella burnetii RSA 493]
          Length = 332

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 60/410 (14%), Positives = 129/410 (31%), Gaps = 89/410 (21%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R     L R     + G++ L   S   P+ +     G+ +   + V      SG++K
Sbjct: 1   MERIPGMRLIRPIFWLLFGMLLLSGCSKNQPVLLQGYVEGQFIYLSSSV------SGLLK 54

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V  G  + +   L   +        + ++  ++  +  +  EK  L+ L        
Sbjct: 55  SLLVYRGDSVKEDQTLFILDP-------EPQESELQEAKAKLTQEKENLENL-------- 99

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                         G+  +  +++      ++   +  + T  R  +L R+   +K  L 
Sbjct: 100 ------------VKGQRQTILNRIIAEREQAIADMIYAQQTLTRFQHLYRVRAISKDELD 147

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +A                +K  V+Q + N  E             + E+K+++     + 
Sbjct: 148 KATADYK----------AKKQIVNQTEANLAE-----------AQLGERKHLILAQQAVV 186

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D A    A  + E                          +QKT+++P  G I     F  
Sbjct: 187 DAAQANVAKLIWE-------------------------LDQKTVVAPKNGNIFD-TFFKV 220

Query: 309 SNYAQQSQPL-MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             Y    QP+   + P++        +    +  +K G     +       R     A +
Sbjct: 221 GEYVPAGQPVTALLTPNNIKLIF--YIPEPLLSRLKLGTVVEFKCDGCTIQR-----AKV 273

Query: 368 EKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             I P        + +Q    +++ ++       N ++   G P +V   
Sbjct: 274 TYISPEAEYTPPIIYSQKSRAKLVYRVECAIPEKNALKFHAGQPVDVYLH 323


>gi|149371442|ref|ZP_01890928.1| putative HlyD family secretion protein [unidentified eubacterium
           SCB49]
 gi|149355580|gb|EDM44139.1| putative HlyD family secretion protein [unidentified eubacterium
           SCB49]
          Length = 397

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 80/244 (32%), Gaps = 19/244 (7%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           N++D+  + S +   +      +     L  +  + + +LN  +     +        + 
Sbjct: 57  NQVDVGTQVSGVVEKIYVDYNSVVKEGQLIAE--LDKTNLNAAKTQAQAAYDNALSQRNY 114

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            K +      LYD   +  +++  +   + E  + T     S L           I SPI
Sbjct: 115 MKTIYDRQKTLYDNQVISKSDF-DDALFNYETAKGTVTQRYSDLQSAITNLGYANIYSPI 173

Query: 297 AGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
            G ++  ++         S     L  I    K   + A V    I  V +G        
Sbjct: 174 DGVVLS-RAIEEGQTVAASLSTPTLFTIAQDLKEMQVEADVDEADIGQVVEGQRVAFTVD 232

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y     + F+  + ++    +   N +     Y V++K       + +++L+ G  A +
Sbjct: 233 AY---LGETFEGEVTQVRLDPTVTSNVVT----YTVVIKAD-----NPDLKLKPGLTATI 280

Query: 414 LFTA 417
               
Sbjct: 281 SIYT 284



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 72/193 (37%), Gaps = 4/193 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+++G I   + V ++ +  SG+++K  V+  S + +G  +   +           + + 
Sbjct: 47  VTATGTIEPTNQV-DVGTQVSGVVEKIYVDYNSVVKEGQLIAELDKTNLNAAKTQAQAAY 105

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            N     +  K+  D     YD    +    ++ L ++     +   +  +   +     
Sbjct: 106 DNALSQRNYMKTIYDRQKTLYDNQVISKSDFDDALFNYETAKGTVTQRYSDLQSAITNLG 165

Query: 164 LKMKLTRMRSIYLNRLDLENK---SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                + +  + L+R   E +   +SL    L +  +DL  M+   + +      + + +
Sbjct: 166 YANIYSPIDGVVLSRAIEEGQTVAASLSTPTLFTIAQDLKEMQVEADVDEADIGQVVEGQ 225

Query: 221 RIVYKSTLELREN 233
           R+ +     L E 
Sbjct: 226 RVAFTVDAYLGET 238


>gi|172064858|ref|YP_001815570.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
 gi|171997100|gb|ACB68017.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
          Length = 480

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 79/260 (30%), Gaps = 32/260 (12%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            + +   +L   + ++ S+Y+N        +  ++ L   Q DL   + + +  AVS   
Sbjct: 118 ALGNAEAALGQIVRQVSSLYVNNDLYAANVAQRQSDLVRAQDDLRRRQAVADTGAVS--- 174

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                           E+I   ++ +       D A  +        +R           
Sbjct: 175 ---------------AEDIAHARDNVAAARAALDAARQQAEANRALTARTTIDQHPNVQA 219

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             SK+        +  + +P+ G +   +S           PLM IVP     ++ A   
Sbjct: 220 AASKVRDAYLAYARNVLPAPVTGYVAK-RSAQVGQRVSPGTPLMAIVPLDG-VWVDANFK 277

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----------E 385
             Q+++++ G   T+    Y       +   +            +L  Q          +
Sbjct: 278 EGQLRNMRVGQPVTLTADVYGGKVT--YHGRVVGFSAGTGSAFASLPAQNATGNWIKIVQ 335

Query: 386 YYEVILKITDLAFSDNNIEL 405
                ++I       + + +
Sbjct: 336 RLPARIQIDRKELDAHPLRI 355


>gi|271502180|ref|YP_003335206.1| secretion protein HlyD family protein [Dickeya dadantii Ech586]
 gi|270345735|gb|ACZ78500.1| secretion protein HlyD family protein [Dickeya dadantii Ech586]
          Length = 439

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 57/168 (33%), Gaps = 6/168 (3%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
            W  L+        R      I ++ ++   +L+P+  SV +  E++  +  V       
Sbjct: 158 AWLALEPQPVWRRTRWRWKLAIPLLVVVG-CLLIPVRQSVLAPAEVIPLNGRVVAAPLD- 215

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I+ F V+    + +G  L+  +D       D+ + S+       + E  A      + 
Sbjct: 216 GVIQAFAVQPNQSVRKGDVLVRIDDTTLKAQADVAERSLNV----AEAEYRASSQRAFQD 271

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
              +   +    Q+     +     + +    I +    + +     R
Sbjct: 272 ADSKARLDFLAAQVAQKRAERDYANALLSRTEIRAERDGIAVFADAER 319



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 60/208 (28%), Gaps = 20/208 (9%)

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           +  +TL+ + ++ E+     ++ E    A+ + A    +    L+      A + ++   
Sbjct: 238 IDDTTLKAQADVAERS---LNVAEAEYRASSQRAFQDADSKARLDFLAAQVAQKRAERDY 294

Query: 283 LEKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQ 340
                 +  I +   G  +  +    +    +  + LM +  P S    I   +      
Sbjct: 295 ANALLSRTEIRAERDGIAVFADAERWTGKPVRTGERLMDLADPASVSLRIE--LDVGDAI 352

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            ++     T+                   +D I  + +        Y +  + T      
Sbjct: 353 RLEPDAPITLFLDSDPITPHGAL------LDRIAYESEPTPSGNLAYRLDARFT------ 400

Query: 401 NNIELRNGFPAEVLFTAKNTTLAQEIIH 428
                R G       + +   LA  +  
Sbjct: 401 -GEPPRIGLRGTAKISGEYVPLAVYLFR 427


>gi|240138987|ref|YP_002963462.1| TonB-dependent siderophore receptor [Methylobacterium extorquens
           AM1]
 gi|240008959|gb|ACS40185.1| TonB-dependent siderophore receptor [Methylobacterium extorquens
           AM1]
          Length = 628

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 17/211 (8%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD---LEQNQRTFADEMSKLTI 282
              +L   + ++   L  +  + +     +       +R    +   +       +++ +
Sbjct: 420 RKGDLLAALEDRDLALERLRWVTERQQRTYEYDKALATRQPATINVVKSQIDQADAQIRL 479

Query: 283 LEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           L++   +    +P  G IV  + S S      + Q L +I P      +   V  + I  
Sbjct: 480 LDEQIARSKFTAPFDGLIVSGDLSQSIGGAISRGQVLFEIAPLDSYRVV-LSVDERLIAD 538

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           +++G T  V      D  +      I+ I P+          +  + V  +I D A    
Sbjct: 539 LREGQTGHVLATSLPDQPQVL---TIQTITPVA----EAKNGRNLFRVEGRIEDGAT--- 588

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
              LR G             LA     PI D
Sbjct: 589 --RLRPGMEGIAKVDVDRRLLAWVWARPIVD 617


>gi|78047664|ref|YP_363839.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78036094|emb|CAJ23785.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 371

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 29/197 (14%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS--RDLEQNQ----------RTFA 274
           + EL     +       + +   E   + A  +  IS  RDL+  Q          R  +
Sbjct: 114 SAELASAYSDAGKTRATLEQARLELARQKALAVDSISAARDLQAAQQAFDSAQNDARAAS 173

Query: 275 DEMSKLTILEKTR--EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           D +++L +  +     +  + +PIAG +    +     +   S  LM  V      ++ A
Sbjct: 174 DRLAQLGVAAQASSHRRYVVRAPIAGRVAELSAALGGFWNDTSASLMT-VADISQVWLTA 232

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  ++I  V +G   T     Y   R   F   ++ +D ++      L      +V + 
Sbjct: 233 SVPEREIGQVFEGQPVTASLDAYPGQR---FVGHVQHLDDLLDPATRTL------KVRV- 282

Query: 393 ITDLAFSDNNIELRNGF 409
               A ++ +  L+ G 
Sbjct: 283 ----ALNNRDGLLKPGM 295



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 43/143 (30%), Gaps = 10/143 (6%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +L E  V  +  P +G +       G  +  G  L   +  E               +  
Sbjct: 76  VLPERLVRVV-PPLAGRVVALPKTLGDTVHAGDVLCVLDSAELASAYS------DAGKTR 128

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
              E++ L+    K   ++    +R+ Q            ++  +  ++ +         
Sbjct: 129 ATLEQARLELARQKALAVDSISAARDLQAAQQAFDSAQNDARAASDRLAQLG---VAAQA 185

Query: 170 RMRSIYLNRLDLENKSSLLRALL 192
                Y+ R  +  + + L A L
Sbjct: 186 SSHRRYVVRAPIAGRVAELSAAL 208


>gi|187731943|ref|YP_001882289.1| auxiliary transport protein, membrane fusion protein family
           [Shigella boydii CDC 3083-94]
 gi|187428935|gb|ACD08209.1| auxiliary transport protein, membrane fusion protein family
           [Shigella boydii CDC 3083-94]
          Length = 378

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 79/244 (32%), Gaps = 9/244 (3%)

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
               Q+   + +     +++   G             R+  +  + +   +    LRA L
Sbjct: 65  PITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQL 124

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +  Q + T +    ++   +     +  +       E   +I + +      + L   + 
Sbjct: 125 TEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSE--RDIDDARQNFLAQDALVKGSV 182

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            E A    ++   +   Q       ++LT  +   EQ  I +P  G +          YA
Sbjct: 183 AEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIR-PGTYA 241

Query: 313 Q--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                +P+M  +P  K   + A+     +  +K G  A V F          F   +  I
Sbjct: 242 AALPLRPVMVFIPEQKRQIV-AQFRQNSLLRLKPGDDAEVVFNALPRQ---VFHGKLTSI 297

Query: 371 DPII 374
            P++
Sbjct: 298 LPVV 301



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 55/155 (35%), Gaps = 11/155 (7%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI-------KNLRCHID 111
           I    +GI+ +   +N   I +G  L   + +     +D  +  +       K LR  + 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 112 TEKSALDFLNNKYDVL----EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++    ++ + D L    ++  +  +  +  F  +      + F    + V  S+  +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                 +       +++   LRA L+  + +L   
Sbjct: 186 AQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQT 220


>gi|189347108|ref|YP_001943637.1| efflux transporter, RND family, MFP subunit [Chlorobium limicola
           DSM 245]
 gi|189341255|gb|ACD90658.1| efflux transporter, RND family, MFP subunit [Chlorobium limicola
           DSM 245]
          Length = 358

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 63/223 (28%), Gaps = 16/223 (7%)

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +  +  + L  K  V   D      ++Y    EL+  + E+         L +       
Sbjct: 70  EIFSETRGLVRKVQVEVGDRKAAGAVLYIVDDELQRTLFEKAEASFEKAALDNVRYENLH 129

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                    LE  +    +  + +    +      I +P++GT+   +        Q   
Sbjct: 130 REGAVALSALESVRLKREEAEADMIEARRNLRNTRIKTPVSGTVTE-KIVDEGEMVQPGM 188

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +  +V       I   ++ K++  +  GY   V          K  K  +  I      
Sbjct: 189 RVANLV-DLSRLRITFFLSEKEVSTILPGYPVRVIS---DQHPGKTLKGRVSSIS----- 239

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                     Y     +     +  +  LR G    V+ + + 
Sbjct: 240 --GKAGMDRSYAAEAVL----RNSTDFPLRAGMFVRVILSGEE 276


>gi|301164140|emb|CBW23696.1| putative lipoprotein [Bacteroides fragilis 638R]
          Length = 355

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 39  PIEISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
            I+  +++  +  +     V   +        SG I K  V++G+Q+ +G  L   +  +
Sbjct: 33  KIDTVIAADKQKFLQFPGRVKAAQDISLSFRVSGTINKIYVKDGAQVREGQILAELDPTD 92

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
               +D  +   + ++   +   +         +  +KA
Sbjct: 93  YQVQLDATEAEYRQVKAEAERVMALYKENGTTPNANDKA 131


>gi|83816850|ref|YP_445723.1| M23 peptidase domain-containing protein [Salinibacter ruber DSM
           13855]
 gi|294507617|ref|YP_003571675.1| peptidase M23B [Salinibacter ruber M8]
 gi|83758244|gb|ABC46357.1| M23 peptidase domain protein [Salinibacter ruber DSM 13855]
 gi|294343945|emb|CBH24723.1| Peptidase M23B [Salinibacter ruber M8]
          Length = 412

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 64/215 (29%), Gaps = 8/215 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL------GKYH 146
              I L++  +   +  +D        L +    L+   E+  +   D L      G+ H
Sbjct: 82  QREIALREKLVSTYQARLDELGRERSRLRDTLSTLQTRLETLRKDYRDQLVHAYKYGRLH 141

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                + +  I+ +    +            R  ++  +  +R+      +     ++L 
Sbjct: 142 DLALLLASRSINQMLIRARYLRRFATDRRRQRSAIQTAAGEVRSSREQLAEKRAETRDLL 201

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            +    + +L   ER   +   ELR    E +  +        +        +    R+ 
Sbjct: 202 AEARTERTNLRALERERRQVIDELRARRSELEQQIEQKQRQAQQLEQRIQKLVARAKRE- 260

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
            Q       E++          +  +  P+ G + 
Sbjct: 261 -QADSGMEAEVAANLSASFQANRGALPWPVEGAVT 294



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 13/178 (7%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSS 186
           EK  ES +EQL     +      +       +    L  + +R+R      +  LE    
Sbjct: 68  EKEAESTQEQLESLQREI--ALREKLVSTYQARLDELGRERSRLRDTLSTLQTRLETLRK 125

Query: 187 LLRALLSSHQK--DLTMMKNLFEKNAVSQNDLN-QQERIVYKSTLELRENIHEQKNMLRH 243
             R  L    K   L  +  L    +++Q  +  +  R         R  I      +R 
Sbjct: 126 DYRDQLVHAYKYGRLHDLALLLASRSINQMLIRARYLRRFATDRRRQRSAIQTAAGEVRS 185

Query: 244 INELYDEANLEFANYLKEISRDL-------EQNQRTFADEMSKLTILEKTREQKTILS 294
             E   E   E  + L E   +         + ++   +  ++ + LE+  EQK   +
Sbjct: 186 SREQLAEKRAETRDLLAEARTERTNLRALERERRQVIDELRARRSELEQQIEQKQRQA 243


>gi|37520374|ref|NP_923751.1| hypothetical protein glr0805 [Gloeobacter violaceus PCC 7421]
 gi|35211367|dbj|BAC88746.1| glr0805 [Gloeobacter violaceus PCC 7421]
          Length = 426

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 88/260 (33%), Gaps = 34/260 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V+      V R   +     R +      +E + +  RAL++  + +    + L  +   
Sbjct: 113 VYVEEGERVQRGQLLARLNDRPLRAQIRQVEAEIARGRALIAQSRANFAEARALRGEAEA 172

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +++  +  +R         +  I E +   R  +     A L  A      S+ +   + 
Sbjct: 173 NRHRFDDLQR---------QGAISEVEATARRTSADTYGARLGGA------SQAIAVAES 217

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKLTY 329
             A   ++   L     Q  I +P  G I   Q+    +      +Q L  +V   +   
Sbjct: 218 DLARAEARREELLAMLAQTRITAPAEGLISKRQA-KLGSVVSPLSAQALFTLV-RDRRLE 275

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           ++A+V+  ++  +  G    V+     + R   F   + +I P +     N         
Sbjct: 276 LQAEVSEVRLGAIAPGQAVAVQTDALPERR---FAGRVREIAPAVDAGSRN--------A 324

Query: 390 ILKITDLAFSDNNIELRNGF 409
           ++KI        +  LR G 
Sbjct: 325 LVKID----LPLDPALRPGM 340



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 60/182 (32%), Gaps = 7/182 (3%)

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK---SALD 118
                I+   VE G ++ +G  L    D      I   +  I   R  I   +   +   
Sbjct: 105 LTGLRIEGVYVEEGERVQRGQLLARLNDRPLRAQIRQVEAEIARGRALIAQSRANFAEAR 164

Query: 119 FLNNKYDVLEKAFESREEQ--LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            L  + +     F+  + Q  + +       T +  +   +    +++ +  + +     
Sbjct: 165 ALRGEAEANRHRFDDLQRQGAISEVEATARRTSADTYGARLGGASQAIAVAESDLARAEA 224

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            R +L    +  R  +++  + L   +     + VS         +V    LEL+  + E
Sbjct: 225 RREELLAMLAQTR--ITAPAEGLISKRQAKLGSVVSPLSAQALFTLVRDRRLELQAEVSE 282

Query: 237 QK 238
            +
Sbjct: 283 VR 284


>gi|296133304|ref|YP_003640551.1| efflux transporter, RND family, MFP subunit [Thermincola sp. JR]
 gi|296031882|gb|ADG82650.1| efflux transporter, RND family, MFP subunit [Thermincola potens JR]
          Length = 367

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 70/182 (38%), Gaps = 15/182 (8%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           + ++    L+ E  +   N+ ++I    +  Q ++ +  + L     +    TI SP+ G
Sbjct: 128 SQVQRYETLFKEGAISEQNF-RQIIFSRDTAQSSYEEAKAALEEARISLANSTIYSPMTG 186

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           TI+   S+   + A   +P++ I   ++   +  KV  + +  +K+G    V        
Sbjct: 187 TIIAVYSY-PGDMAVPGKPILTIA-DTRKLKVTVKVVEEDLIKLKRGMK--VNLSPVNST 242

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +   + A I +I P + +            V + +      D N++L  G    V F   
Sbjct: 243 KY--YTATITEIFPTLDKTIRTGS------VEIAVPPDMIKDYNLKL--GMSINVFFIFG 292

Query: 419 NT 420
             
Sbjct: 293 EK 294


>gi|119898624|ref|YP_933837.1| membrane fusion protein [Azoarcus sp. BH72]
 gi|119671037|emb|CAL94950.1| membrane fusion protein [Azoarcus sp. BH72]
          Length = 424

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/221 (9%), Positives = 67/221 (30%), Gaps = 7/221 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  ++I++S+ G +    N   +K    G +       G  +  G  L   +      
Sbjct: 73  ARVGDLDIALSALGTVTAS-NTAVVKPRVGGQLTALHFREGQVVKAGELLAEIDPRPFRI 131

Query: 95  LIDLKKVSIKNLRCHIDTEKSALD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +D  +         +   +  L+    L  +  +  +  +++E  +    G   +  + 
Sbjct: 132 ALDQARAQRLRDEATLGAARVDLERYRALLAQDSIARQQVDAQEALVRQLEGTVAADAAL 191

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD-LTMMKNLFEKNA 210
                +   +  +         + +  +  +  +     L+   Q   +  +  L     
Sbjct: 192 EAQAALQLEFTRVTAPAAGRLGLRVVDIGNQVDAQDAAGLVVITQTQPIHAVFALAADAL 251

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
             Q  L Q ++    + +E        +     +  + ++ 
Sbjct: 252 TPQ--LGQLQQGARGAVVEAWSRDGRTRLAEGRLISIDNQI 290


>gi|187920632|ref|YP_001889664.1| RND family efflux transporter MFP subunit [Burkholderia
           phytofirmans PsJN]
 gi|187719070|gb|ACD20293.1| efflux transporter, RND family, MFP subunit [Burkholderia
           phytofirmans PsJN]
          Length = 383

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 92/266 (34%), Gaps = 36/266 (13%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLL-RALLSSHQKDLTMMKNLFEKNAVS 212
             + + Y+  + +L  + S+   R +D+  + + L R +  S  ++    + L   NA S
Sbjct: 51  SAVVARYQQWQPQLAAVGSLRAVRGVDVTTEVAGLVREVAFSSGQEARAGQVLIRLNADS 110

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
              L +      +++ EL + ++ +      I  +                  L+ +   
Sbjct: 111 DVALLR----SLEASAELAQTVYTRDKAQYDIKAI--------------AKAQLDADAAD 152

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
              + +++       ++KTI +P AG  +   + +   Y      ++ +       Y   
Sbjct: 153 LKVKKAQVAQQAALVDKKTIRAPFAGR-LGITTINPGQYINPGDAIVTLQAID-PIYADF 210

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            +  +Q+  +  G T  V    Y+      F   I+ + P +     N+Q          
Sbjct: 211 YLPQQQLGQLAIGQTIVVDTNAYSGQT---FVGKIQSVSPKVDSTTRNVQI--------- 258

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAK 418
             + +  +   +L  G  A V   A 
Sbjct: 259 --EASVDNRERKLLPGMYANVKIDAG 282


>gi|26250236|ref|NP_756276.1| hypothetical protein c4414 [Escherichia coli CFT073]
 gi|91213108|ref|YP_543094.1| hypothetical protein UTI89_C4135 [Escherichia coli UTI89]
 gi|218560668|ref|YP_002393581.1| hypothetical protein ECS88_4010 [Escherichia coli S88]
 gi|218691880|ref|YP_002400092.1| hypothetical protein ECED1_4279 [Escherichia coli ED1a]
 gi|227883761|ref|ZP_04001566.1| secretion protein HlyD family protein [Escherichia coli 83972]
 gi|237703363|ref|ZP_04533844.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|300971518|ref|ZP_07171489.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 45-1]
 gi|301047050|ref|ZP_07194153.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 185-1]
 gi|306816055|ref|ZP_07450193.1| hypothetical protein ECNC101_05574 [Escherichia coli NC101]
 gi|331649412|ref|ZP_08350498.1| inner membrane protein YibH [Escherichia coli M605]
 gi|331685260|ref|ZP_08385846.1| inner membrane protein YibH [Escherichia coli H299]
 gi|26110665|gb|AAN82850.1|AE016768_268 Hypothetical protein yibH [Escherichia coli CFT073]
 gi|91074682|gb|ABE09563.1| hypothetical protein YibH [Escherichia coli UTI89]
 gi|218367437|emb|CAR05219.1| conserved hypothetical protein [Escherichia coli S88]
 gi|218429444|emb|CAR10267.1| conserved hypothetical protein [Escherichia coli ED1a]
 gi|222035306|emb|CAP78051.1| Inner membrane protein yibH [Escherichia coli LF82]
 gi|226902627|gb|EEH88886.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|227839341|gb|EEJ49807.1| secretion protein HlyD family protein [Escherichia coli 83972]
 gi|281180639|dbj|BAI56969.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|294493483|gb|ADE92239.1| membrane fusion protein (MFP) (TC 8.A.1) family [Escherichia coli
           IHE3034]
 gi|300301022|gb|EFJ57407.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 185-1]
 gi|300411230|gb|EFJ94768.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 45-1]
 gi|305850451|gb|EFM50908.1| hypothetical protein ECNC101_05574 [Escherichia coli NC101]
 gi|307555696|gb|ADN48471.1| auxiliary transport protein [Escherichia coli ABU 83972]
 gi|307628672|gb|ADN72976.1| hypothetical protein UM146_18130 [Escherichia coli UM146]
 gi|312948157|gb|ADR28984.1| hypothetical protein NRG857_17880 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315294093|gb|EFU53445.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 153-1]
 gi|324007374|gb|EGB76593.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 57-2]
 gi|330909658|gb|EGH38172.1| multidrug resistance protein A [Escherichia coli AA86]
 gi|331041910|gb|EGI14054.1| inner membrane protein YibH [Escherichia coli M605]
 gi|331077631|gb|EGI48843.1| inner membrane protein YibH [Escherichia coli H299]
          Length = 378

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNADIDALPDGIYAQV 347


>gi|113970910|ref|YP_734703.1| secretion protein HlyD family protein [Shewanella sp. MR-4]
 gi|113885594|gb|ABI39646.1| secretion protein HlyD family protein [Shewanella sp. MR-4]
          Length = 337

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 56/165 (33%), Gaps = 4/165 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E + + + +P   +I +  V  G Q+  G  LL  +       +  ++  +K  +  +
Sbjct: 51  TVERDRLTLTAPVGELINRINVVEGQQVQAGEVLLELDSTAAQARLGQRQAELKQAQAKL 110

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             E++     +   D    A +     + +    +  T  ++F   + S       +  R
Sbjct: 111 --EEAVTGARSEDIDKARAALDGANASVKEARQNFERTQ-QLFKTKVLSQADLDAARAAR 167

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             S+   + + E    LL+    S Q +            V+Q  
Sbjct: 168 DTSL-AKQAEAEQSLRLLQNGTRSEQLEQARAAVEAAMAGVAQEQ 211



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 93/307 (30%), Gaps = 37/307 (12%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           + +  L N+ +V+E       E LL+                +      L+  +T  RS 
Sbjct: 61  APVGELINRINVVEGQQVQAGEVLLELDSTAAQARLGQRQAELKQAQAKLEEAVTGARSE 120

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            +++           A +   +++    + LF+   +SQ DL+        S  +  E  
Sbjct: 121 DIDKA--RAALDGANASVKEARQNFERTQQLFKTKVLSQADLDAARAARDTSLAKQAEAE 178

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              + +                      S  LEQ +      M+ +   +K  +  ++++
Sbjct: 179 QSLRLLQNGTR-----------------SEQLEQARAAVEAAMAGVAQEQKALKDLSLVA 221

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
                +         +       L+ ++      Y+R  +    +  VK G    +    
Sbjct: 222 AKPAVVDTLPWR-VGDRVAAGSQLIGLLAIEHP-YVRVYLPATWLDRVKAGNQVKILVDG 279

Query: 355 YADIREKKFKAIIEKI------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
               R +     +  I       P  +  + +     Y      +TD+  +    +L  G
Sbjct: 280 ----RTQPIAGTVRNIRSQPAYTPFYALNERDRARLMY------LTDIDIAPEGEDLPTG 329

Query: 409 FPAEVLF 415
              EVL 
Sbjct: 330 MALEVLL 336


>gi|319779505|ref|YP_004130418.1| AcrA protein [Taylorella equigenitalis MCE9]
 gi|317109529|gb|ADU92275.1| AcrA protein [Taylorella equigenitalis MCE9]
          Length = 326

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 62/157 (39%), Gaps = 14/157 (8%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E  VS++G ++   N +++ S + G I +  V+ G  I +   L++    ++   +   +
Sbjct: 30  EGIVSTNGRLV--MNRLDLASLYPGRIHEIHVKEGDDIKKDQVLVSLSSDQSKSQLAATE 87

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY----- 155
            +    +   +  +S +D  N +  V E  + + ++     L        +  +Y     
Sbjct: 88  AAQNRAKVATERVQSEIDARNQQMKVAELEYSNAKKLYNQRLISSVELSRRKLDYETAKA 147

Query: 156 -------GISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                  G++     ++    ++ ++     DLE KS
Sbjct: 148 AVDAATAGLAEAEAGVEQANAQVNAVKSADSDLEVKS 184



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/294 (10%), Positives = 82/294 (27%), Gaps = 42/294 (14%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L   +  R  ++    G        + +         L           +    ++++  
Sbjct: 46  LASLYPGRIHEIHVKEGDDIKKDQVLVSLSSDQSKSQLAATEAAQNRAKVATERVQSEID 105

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                +   + + +  K L+ +  +S  +L++++     +                    
Sbjct: 106 ARNQQMKVAELEYSNAKKLYNQRLISSVELSRRKLDYETAKA------------------ 147

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                       +   +  L + +       +++  ++       + SPI G + +    
Sbjct: 148 -----------AVDAATAGLAEAEAGVEQANAQVNAVKSADSDLEVKSPIDGRVEFV-IV 195

Query: 307 SSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
              N       ++ ++ P     Y+   +  + I  +K    A +       +    F A
Sbjct: 196 QKGNVIGPGSKVVSLLDPTD--IYMNVFLPTQDIAKLKLNSEARIVLDGVDAV----FPA 249

Query: 366 IIEKIDPIIS-----QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
            +  I           +    + +  Y+V L+I        N  L+ G    V 
Sbjct: 250 KVVFISSKAQFTPKYVETKTERDKLMYKVKLQIPPELSIKYNAYLKGGLTGVVY 303


>gi|301018355|ref|ZP_07182860.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 69-1]
 gi|300399723|gb|EFJ83261.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 69-1]
          Length = 378

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLS 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 347


>gi|298507433|gb|ADI86156.1| efflux pump, RND family, membrane fusion lipoprotein [Geobacter
           sulfurreducens KN400]
          Length = 584

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 65/222 (29%), Gaps = 32/222 (14%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++ ++      V      L   + +              A  E+    + +   +   +
Sbjct: 297 VAKGEVIA----VIDPPASLGGGMTQLAADHAQAMSRLTLAQAEYDRAKRLVEGKIAARK 352

Query: 271 RTF---------ADEMSKLTILEKTRE-----QKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           R               + L    K+ +     + T+ +P++GT+V   + +  +     Q
Sbjct: 353 RLEEAEASLEAARAVATPLETAMKSVQGGSGGRITVRAPVSGTVVEVPAVN-GSGVAPGQ 411

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L++IV  +   ++R  +    +  V  G  A                        +   
Sbjct: 412 TLVRIV-DTGRLWLRVNLPATDLGKV--GRPA----AAGTTFTVTGLPGEFHTSGLVSDG 464

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
              + QT+    V       A  + +  L+ G  A V     
Sbjct: 465 TVVDPQTRTLPLVF------AVENRSGNLKAGMFARVTIRTG 500


>gi|290510233|ref|ZP_06549603.1| membrane fusion protein (MFP) family auxiliary transporter
           [Klebsiella sp. 1_1_55]
 gi|289776949|gb|EFD84947.1| membrane fusion protein (MFP) family auxiliary transporter
           [Klebsiella sp. 1_1_55]
          Length = 380

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 79/272 (29%), Gaps = 48/272 (17%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   +  +   +K       S+       + + S   A     +++    +    + A S
Sbjct: 99  FQAKVDDLQAQIKAASQDALSLNAALSQAQAELSRAVAQRDQSRREYARYREGHAQGAFS 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
              ++ + +        +                    A  +       +   ++    T
Sbjct: 159 DQMVDTRLQTWKADEASVSA------------------AQAKVVQARNALDSVVKGKNTT 200

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--------PLMKIVPH 324
            A  +++L   +   E   + +P  G +      +     +           PLM  VP 
Sbjct: 201 VASLLAQLQKAQFQLENTVVRAPEDGYV-----STVG--LRPGTMSTALGMIPLMTFVPV 253

Query: 325 SKLTYIR--AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ------ 376
                    A      +Q + KG  A + FP         F+  +  + P I +      
Sbjct: 254 EGAASREYVAAFRQNALQRLHKGEPAELMFPAIPGT---VFRGEVADVLPAIGESQFQGQ 310

Query: 377 ----QDNNLQTQEYYEVILKITDLAFSDNNIE 404
                 + L T     V+LK+TD  F++  + 
Sbjct: 311 GKLLTTDALNTHGRALVVLKVTDPRFAEYALP 342



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 51/173 (29%), Gaps = 10/173 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LR 107
             V I S   G ++   V+    + +G  L T +       +D  +  IK        L 
Sbjct: 62  RTVPIVSQVRGRVQSVPVKLNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSLN 121

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
             +   ++ L     + D   + +    E      F  +   T  + +    +SV  +  
Sbjct: 122 AALSQAQAELSRAVAQRDQSRREYARYREGHAQGAFSDQMVDTRLQTWKADEASVSAAQA 181

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLN 217
             +    ++           + L A L   Q  L        E   VS   L 
Sbjct: 182 KVVQARNALDSVVKGKNTTVASLLAQLQKAQFQLENTVVRAPEDGYVSTVGLR 234


>gi|258516038|ref|YP_003192260.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257779743|gb|ACV63637.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 387

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 80/252 (31%), Gaps = 18/252 (7%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
                + L  LDL  + S +R+ LS  +           + +++  +  Q E+       
Sbjct: 80  QGQILVVLENLDLALQISDMRSQLSQART--------AAEGSMAALERIQLEQKDAAENF 131

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +  + ++++    R   +            ++E    L       A     L  L    +
Sbjct: 132 DRLQRLYQEGAASRVDYDKARLQVETIRQNMEEQKSKLNSALEQSAGFEQSLQQLNTKEQ 191

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           Q  + +P+ GT++                L+  V  ++   ++A +    +  VK G   
Sbjct: 192 QLVVKTPVKGTVLELPVKQE-QVLNSGD-LLAGVAVAEQLEVKADILSDDLAEVKVGQKV 249

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            +  P       K     +++I P   ++ + L       +  ++  +    +   L+ G
Sbjct: 250 DITAPVLGQ---KVLLGEVKQIYPSAEEKQSALG-----IIQRRVPVIIALSDRANLKPG 301

Query: 409 FPAEVLFTAKNT 420
           +           
Sbjct: 302 YEVRAAIRTITR 313



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 44/123 (35%), Gaps = 2/123 (1%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + +  V+ G  + QG  L+  E+++    I   +  +   R   +   +AL+ +  +  
Sbjct: 66  RVLRVPVKIGQTVKQGQILVVLENLDLALQISDMRSQLSQARTAAEGSMAALERIQLEQK 125

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
              + F+  +    +                + ++ ++++ + +++ S        E   
Sbjct: 126 DAAENFDRLQRLYQEGAASRVDY--DKARLQVETIRQNMEEQKSKLNSALEQSAGFEQSL 183

Query: 186 SLL 188
             L
Sbjct: 184 QQL 186


>gi|323189365|gb|EFZ74647.1| hlyD family secretion family protein [Escherichia coli RN587/1]
          Length = 378

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 95/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP         ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGKDGVLGTIELDPNADIDALPDGIYAQV 347


>gi|258625295|ref|ZP_05720198.1| putative secretion protein [Vibrio mimicus VM603]
 gi|258582403|gb|EEW07249.1| putative secretion protein [Vibrio mimicus VM603]
          Length = 344

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 73/227 (32%), Gaps = 21/227 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  Q +       +  ++ +   +     SL+  L +  ++Y  R       +  +A   
Sbjct: 51  RNNQQVHQGDVLFTIDARKYRIALEQAELSLQSALEKEATLYSQREAALANIARTQATYD 110

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           +  ++   ++ L  +  +S++ L+        +   L+      K +   + E   ++  
Sbjct: 111 NAHREYLRLQKLSTQQVISRSALDNAFAQNQVAHANLKAEQQSLKVIEAQLGEGEGQSTA 170

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               +                   + +   +       +L+P  G +   Q     + A 
Sbjct: 171 VRVAH-------------------NGIEKAQLDLANTRVLAPSDGVVTNLQL-EVGSMAN 210

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            +QP++  +P     ++      K + +V   Y A V F  Y     
Sbjct: 211 ANQPMLTFIPTGS-LWVTGDFREKSVANVDASYHAMVAFDAYPGQVY 256



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 11/202 (5%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
            I+  I L  + I       +++ G +  +  VV++    SG + + Q+ N  Q+ QG  
Sbjct: 4   LIVLFIVLFFYIIFADQHAPITTEGRV--QGYVVQVAPEVSGKVTQVQIRNNQQVHQGDV 61

Query: 84  LLTFEDIETTDLIDLKKVSI-----KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
           L T +  +    ++  ++S+     K    +   E +  +    +        E    Q 
Sbjct: 62  LFTIDARKYRIALEQAELSLQSALEKEATLYSQREAALANIARTQATYDNAHREYLRLQK 121

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA---LLSSH 195
           L        +            + +LK +   ++ I     + E +S+ +R     +   
Sbjct: 122 LSTQQVISRSALDNAFAQNQVAHANLKAEQQSLKVIEAQLGEGEGQSTAVRVAHNGIEKA 181

Query: 196 QKDLTMMKNLF-EKNAVSQNDL 216
           Q DL   + L      V+   L
Sbjct: 182 QLDLANTRVLAPSDGVVTNLQL 203


>gi|302876260|ref|YP_003844893.1| efflux transporter, RND family, MFP subunit [Clostridium
           cellulovorans 743B]
 gi|307686992|ref|ZP_07629438.1| efflux transporter, RND family, MFP subunit [Clostridium
           cellulovorans 743B]
 gi|302579117|gb|ADL53129.1| efflux transporter, RND family, MFP subunit [Clostridium
           cellulovorans 743B]
          Length = 490

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 15/132 (11%)

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            TI +P  G +      ++ +  +  Q L  I   SK   I+  V    +  +  G    
Sbjct: 268 TTITAPFDGIVSAVSV-AAGDTIKSGQELGTIF-DSKHLIIKMDVDETDLSTISVGQAVD 325

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +    Y+    K F+  I  I      Q +       + V + + D        +++ G 
Sbjct: 326 ITLTAYS---GKTFQGTIAAIGA----QGSYSNGSSTFPVTVSLNDTT------DVKVGM 372

Query: 410 PAEVLFTAKNTT 421
            AE      + T
Sbjct: 373 SAEASIKIASVT 384


>gi|256419655|ref|YP_003120308.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
 gi|256034563|gb|ACU58107.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
          Length = 353

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 59/200 (29%), Gaps = 16/200 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V +  + +Q + +     E+     +          +  E             + ++  
Sbjct: 86  LVDEGSVVRQGQAIANVDGEILGTDLQAAKTNLEQLRVDKERYEAAFKTGGVTKKQVDDA 145

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
              +    +K     +      I +PI+G I   +      Y      +  IV       
Sbjct: 146 TLQYDLAKTKYAAASRRVGDTYIKAPISGVINK-KYIEQGAYLSPGNKMFDIV-DVSRLK 203

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   V   Q+ ++K+G    V    + ++        +  I        N       Y V
Sbjct: 204 LAVSVPELQVVNLKEGDKVRVTSSVFPEVSY---DGHVTFIAAKGDNTLN-------YPV 253

Query: 390 ILKITDLAFSDNNIELRNGF 409
            +++T    ++   +LR G 
Sbjct: 254 EMEVT----NNGGKQLRAGM 269


>gi|161503930|ref|YP_001571042.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865277|gb|ABX21900.1| hypothetical protein SARI_02021 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 372

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 59/202 (29%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  L      +          
Sbjct: 112 LNAERQQAAAELKLARVTLTRRQQLAKTQSVSQQDLDTAATELAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 QASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A    P     R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRPGQKAWFTIPGDPQTRY-------EGVLKDILPTPEKVNDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 66/174 (37%), Gaps = 17/174 (9%)

Query: 18  KRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+  W +L                +E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMAIWRMLNAPLPNYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G  + +   L   +  +  + I   + ++  L    + +++A +    +
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPEQAENQIKEVEATLMELNA--ERQQAAAELKLAR 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +   ++ + +        +T   V    I ++   +K     + +   N
Sbjct: 128 VTLTRRQQLAKTQSVSQQDLDTAATELAVKQARIGTIDAQIKRNQASLDTAKTN 181


>gi|254373519|ref|ZP_04989006.1| membrane fusion protein [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151571244|gb|EDN36898.1| membrane fusion protein [Francisella novicida GA99-3549]
          Length = 457

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 69/201 (34%), Gaps = 26/201 (12%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI---------TWSILLPIEISVSSS-------GEILNE 53
           K+    ++   TL+   GI G             +  +P  ++V+SS        +++N 
Sbjct: 65  KKTASIAIVVATLILFGGIFGFAEFIQSMIKKGMAAYVPQPVAVTSSVVEKTDWKQVINT 124

Query: 54  -DNVVEIKS-----PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
                 ++S        GI+ +   ++G ++ +G  L   +  +    ++    ++K  +
Sbjct: 125 IGEAQAVQSTAISSQSGGIVSEIHFKSGQEVKKGDLLFKLDTSQLKANLEEALSNLKLAK 184

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                 K   + L  +    +++ +      L  L +  +  S++    I + +      
Sbjct: 185 ----ITKDRYNKLVEQKATSKESADKANADYLSALAQVQNIESQIGFKEIRAPFDGKIGI 240

Query: 168 LTRMRSIYLNRLDLENKSSLL 188
                  Y N  D     + +
Sbjct: 241 RNISLGQYFNNGDNAATLTTI 261



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 71/202 (35%), Gaps = 25/202 (12%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S  ++ + + +    T +L+ N+ E  + L  + ++  +   +            ++   
Sbjct: 151 SGQEVKKGDLLFKLDTSQLKANLEEALSNL-KLAKITKDRYNKLVEQKATSKESADKANA 209

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLT 328
            +   ++++  +E     K I +P  G I   ++ S   Y         L  I P     
Sbjct: 210 DYLSALAQVQNIESQIGFKEIRAPFDGKI-GIRNISLGQYFNNGDNAATLTTIAP----I 264

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQEYY 387
           +I   V   ++  +  G    + F  Y+D    + F   I  I+  I+  + ++  Q  Y
Sbjct: 265 FITFPVPQNKVSMISVGQ--EINF--YSDSYPGETFTGKITAINSFINDSNRSITVQATY 320

Query: 388 EVILKITDLAFSDNNIELRNGF 409
                       + + ++  G 
Sbjct: 321 T-----------NPHHKIVAGM 331


>gi|56476437|ref|YP_158026.1| hypothetical protein ebA1846 [Aromatoleum aromaticum EbN1]
 gi|56312480|emb|CAI07125.1| similar to periplsmic HlyD type membrane fusion proteins
           [Aromatoleum aromaticum EbN1]
          Length = 447

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE  V+++G +   D V ++ +  SG +KK  +E GS++  G  L   + I     +D  
Sbjct: 82  IEDVVTATGMLQPRDYV-DVGAQVSGQLKKIHIEVGSEVKAGELLAEIDPIVLQSRVDAT 140

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  ++NLR  +   +S  D       +  +     E+       +            + +
Sbjct: 141 RAQLRNLRAQLMQRES--DRRLADLQLRRQRNLMAEDATTADALQTAEATQLGAQAQVEA 198

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +    + +R+   N
Sbjct: 199 LKAQIDQTESNLRADEAN 216



 Score = 43.5 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 79/246 (32%), Gaps = 23/246 (9%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              S  L+ +      ++   + L E    V Q+ ++     +     +L +   +++  
Sbjct: 102 AQVSGQLKKIHIEVGSEVKAGELLAEIDPIVLQSRVDATRAQLRNLRAQLMQRESDRRLA 161

Query: 241 LRHINELYD---------EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +    +         +A              +E  +       S L   E       
Sbjct: 162 DLQLRRQRNLMAEDATTADALQTAEATQLGAQAQVEALKAQIDQTESNLRADEANLNYAR 221

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           I +PI GT+V   +          Q P++  V       ++ +V+   +  +  G  A  
Sbjct: 222 IYAPITGTVVSITARQGQTLIASQQAPVILRVADLSTMTVQTQVSEADVSRLTLGMDAY- 280

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
            F        ++++  + KI+P    Q+N +     Y  +  +++   +     L     
Sbjct: 281 -FTTLG-GEGRRWQGTLRKIEPTPVVQNNVVL----YNALFDVSNPEQA-----LMTQMT 329

Query: 411 AEVLFT 416
           A+V F 
Sbjct: 330 AQVFFV 335


>gi|294650609|ref|ZP_06727964.1| RND family efflux transporter MFP subunit [Acinetobacter
           haemolyticus ATCC 19194]
 gi|292823492|gb|EFF82340.1| RND family efflux transporter MFP subunit [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 396

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 60/155 (38%), Gaps = 6/155 (3%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            S  E +  + +    L+ + +L +   +      +  +      Q       +++   E
Sbjct: 130 ASYAEAQAVLADAAANLKRVQQLKNTGAISVQESAQYQTSQ-ATAQARLDAAKAQIESNE 188

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
               Q  ++SP  G I   +S +  + AQ  Q L +++        RA+VT   +  +++
Sbjct: 189 LRLTQTKVVSPDNGVI-SARSATVGSLAQTGQELFRLI-RDHRLEWRAEVTTTDLYKLRQ 246

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           G  A +  P   D  + K K  +  I P+I  Q  
Sbjct: 247 GMDAEIISP---DPTQPKIKGKVRMIAPVIDPQTR 278



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 72/207 (34%), Gaps = 8/207 (3%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +++G +     VV         + +  V  G Q+ +G  L           +   K S  
Sbjct: 74  TANGNVAAWQEVVIGSELSGQRLTRVNVNVGDQVKRGQVLAEINSDTIRADLAASKASYA 133

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +  +    + L  +    +    + +           +     ++       +   S 
Sbjct: 134 EAQAVLADAAANLKRVQQLKNTGAISVQE------SAQYQTSQATAQARLDAAKAQIESN 187

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN--LFEKNAVSQNDLNQQERI 222
           +++LT+ + +  +   +  +S+ + +L  + Q+   ++++  L  +  V+  DL +  + 
Sbjct: 188 ELRLTQTKVVSPDNGVISARSATVGSLAQTGQELFRLIRDHRLEWRAEVTTTDLYKLRQG 247

Query: 223 VYKSTLELRENIHEQKNMLRHINELYD 249
           +    +       + K  +R I  + D
Sbjct: 248 MDAEIISPDPTQPKIKGKVRMIAPVID 274


>gi|189466246|ref|ZP_03015031.1| hypothetical protein BACINT_02617 [Bacteroides intestinalis DSM
           17393]
 gi|189434510|gb|EDV03495.1| hypothetical protein BACINT_02617 [Bacteroides intestinalis DSM
           17393]
          Length = 407

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 67/217 (30%), Gaps = 17/217 (7%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDL 266
             +++ D    +  +            E +   +    N+   E  L      ++   + 
Sbjct: 86  QLIAEMDKVTLQSELASQKATYDGAKAEYEYQQKNYERNKGLHEKQLISDTDYEQSLYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ +  +    + L   E+     TI SPI G ++  +                L  I  
Sbjct: 146 QKAKSAYDSSKASLAKAERNLSYATITSPIDGVVIS-RDVEEGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNN 380
                 + A V    I  V++G   +     Y +     F+  + +I       S     
Sbjct: 205 DLTQMQVVADVDEADIGDVEEGQRVSFTVDAYPND---VFEGKVTQIRLGATSSSSSTTT 261

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
             T   YEV++     +  + +++L+    A +    
Sbjct: 262 STTVVTYEVVI-----SAHNPDLKLKPRLTANITIYT 293



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 69/186 (37%), Gaps = 4/186 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII K   +  S + +G  +   + +     +  +
Sbjct: 45  ISNSVTATGTIEPVTEV-EVGTQVSGIIDKLYADYNSVVTKGQLIAEMDKVTLQSELASQ 103

Query: 100 KVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           K +    +   + ++   +    L+ K  + +  +E            Y S+ + +    
Sbjct: 104 KATYDGAKAEYEYQQKNYERNKGLHEKQLISDTDYEQSLYNYQKAKSAYDSSKASLAKAE 163

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +  Y ++   +  +             S      L +   DLT M+ + + +     D+
Sbjct: 164 RNLSYATITSPIDGVVISRDVEEGQTVASGFETPTLFTIAADLTQMQVVADVDEADIGDV 223

Query: 217 NQQERI 222
            + +R+
Sbjct: 224 EEGQRV 229


>gi|188534894|ref|YP_001908691.1| Secretion protein HlyD [Erwinia tasmaniensis Et1/99]
 gi|188029936|emb|CAO97820.1| Secretion protein HlyD [Erwinia tasmaniensis Et1/99]
          Length = 409

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/165 (12%), Positives = 59/165 (35%), Gaps = 4/165 (2%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  + + +++ G ++    V  + S  SG +     + G ++  G  L   +       +
Sbjct: 72  LADVPVYLTALGTVIPNATV-TVTSQVSGTLTHVYFKEGEKVAAGQLLAQIDPRSYQATL 130

Query: 97  DLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              +  +   +  + + +  L     L  +  +  +  E++   +  +LG   +  ++V 
Sbjct: 131 AQYQGDLSQNQALLKSARLTLARYQKLYAQDSLARQDLETQTAAVGQYLGTVKADEAQVA 190

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              ++  +  +   ++    + L       +SS    L+   Q  
Sbjct: 191 AAKLNIEFARITAPISGRVGLRLVDAGNRIQSSDTTGLVVITQTQ 235



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 65/189 (34%), Gaps = 17/189 (8%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIH---EQKNMLRHINELYDEANLEFANYL 259
           + +     ++Q D    +  + +   +L +N       +  L    +LY + +L   +  
Sbjct: 110 EKVAAGQLLAQIDPRSYQATLAQYQGDLSQNQALLKSARLTLARYQKLYAQDSLARQDLE 169

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL- 318
            + +  + Q   T   + +++   +   E   I +PI+G +   +   + N  Q S    
Sbjct: 170 TQTAA-VGQYLGTVKADEAQVAAAKLNIEFARITAPISGRV-GLRLVDAGNRIQSSDTTG 227

Query: 319 MKIVPHSKLTYIRAKVT----PKQIQHVKKGY--TATVRFPHYADI-REKKFKAIIEKID 371
           + ++  ++   +   V     P  ++ +  G    A      +         +  ++ I 
Sbjct: 228 LVVITQTQPAAVTFSVPQSNIPTLLKALHNGQALPA----TAFDQAGSSPLAEGEVQFIS 283

Query: 372 PIISQQDNN 380
             I     +
Sbjct: 284 NQIDTSTGS 292


>gi|172064039|ref|YP_001811690.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
 gi|171996556|gb|ACB67474.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
          Length = 396

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 78/226 (34%), Gaps = 10/226 (4%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           ++    +     + V      +V       L R+     +    + K+ L++A+      
Sbjct: 68  IVQVAAQIPGAVTDVLVADTQAVRAGQP--LVRLDDTEASVAFAQAKAQLVQAVRQVANA 125

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            ++    +   NA  Q DL+  +R +   +    E +  ++           +ANL  A 
Sbjct: 126 KISNTMYVEAVNA-RQADLSLAQRALAARSGASVEIVAPEELARARAAVAGAQANLAAAQ 184

Query: 258 YLKEISRDL-----EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              E +R L                ++  +  +  ++  I++P+ GT+   +S       
Sbjct: 185 AQLEAARALGSKLPVDESPAVVQAAAQFRLAYRNLKRTMIVAPVDGTV-GQRSVQVGQQV 243

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
               PLM IV      +I A     QI+H++ G    V    Y   
Sbjct: 244 GPGVPLMSIV-QLNRLWIEANFKEGQIRHMRTGQPVDVVSDLYGSR 288



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 43/138 (31%), Gaps = 1/138 (0%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPI-EISVSSSGEILNEDNVVEIKSPFSGI 66
            L        KR T    + ++  + W     + +  V  + +     ++V++ +   G 
Sbjct: 19  ALDARRATRRKRFTWFFAVVLLAALVWIAFWLLHDRYVEDTDDAYVAGSIVQVAAQIPGA 78

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V +   +  G PL+  +D E +      K  +      +   K +        + 
Sbjct: 79  VTDVLVADTQAVRAGQPLVRLDDTEASVAFAQAKAQLVQAVRQVANAKISNTMYVEAVNA 138

Query: 127 LEKAFESREEQLLDFLGK 144
            +      +  L    G 
Sbjct: 139 RQADLSLAQRALAARSGA 156


>gi|34497695|ref|NP_901910.1| multidrug efflux protein [Chromobacterium violaceum ATCC 12472]
 gi|34103551|gb|AAQ59912.1| probable multidrug efflux protein [Chromobacterium violaceum ATCC
           12472]
          Length = 386

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 91/285 (31%), Gaps = 10/285 (3%)

Query: 41  EISVSSS--GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           ++++ +   G         E++   +GI+ K     GS +  G  L   +       +  
Sbjct: 52  DVAIRAELAGR-TVAYRSAEVRPQVNGIVLKRHFTEGSLVKAGDLLYQIDPAGYQAALRQ 110

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            + ++ + R  + + K   +       +   + + REE   D+     +  +       +
Sbjct: 111 AEATLASARAALGSLKGRAERYAELAKIDGVSRQEREEADADYRKGLAAAKAGEAAVAAA 170

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            V  S    L  +           ++ +L+ +  S+    +  +  ++     S  DL  
Sbjct: 171 RVDVSRTRVLAPISGRIG--RSAVSEGALVTSGQSAALATIQQLDPMYVDIVQSSQDLLA 228

Query: 219 QERIVYKSTLELRENIHEQKNMLRH-----INELYDEANLEFANYLKEISRDLEQNQRTF 273
            +R      LE        K              + E N++  +    +  +    +   
Sbjct: 229 FKRRQADGELEPAGAAARLKLEDGAPYRHPGKLRFTELNVDRVSGAVTLRAEFPNPEGLL 288

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
              M     LE+   ++ +L+P  G    ++  +++        +
Sbjct: 289 LPGMYVRAELEQGVRRQAVLAPQQGVARDDKGRATALVLGAGDKV 333


>gi|27382983|ref|NP_774512.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110]
 gi|27356156|dbj|BAC53137.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110]
          Length = 390

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/355 (9%), Positives = 83/355 (23%), Gaps = 75/355 (21%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I++  V  G  +  G  L   +  +         +  +  +     ++++++    K 
Sbjct: 91  GRIREILVNEGDFVNAGQVLARMDTEQ---------LQAQRRQAEAQLQRASINVETAK- 140

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                             S+    + +     ++   R+     
Sbjct: 141 ----------------------------------SLVNQREAERRAAEAVVDQRI----- 161

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                A L +  + L   + L   NAVSQ  L+                        +  
Sbjct: 162 -----AQLDTASRKLDRSEQLIRTNAVSQQVLDDDR---------------SANATAKAA 201

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                         +      +     +     + +  +        + +P  G + Y +
Sbjct: 202 LAASQAQVAASEAAISSARAMVIDAGASVDAAKAAIESINADLNDSVLKAPREGRVQY-R 260

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK--- 361
                        ++ +V      Y+   +       V  G    +              
Sbjct: 261 VSQPGEVLAAGGRVLNMVDLGD-VYMTFFLPTADAGRVAIGSEVRLVLDAIPQYVIPAKA 319

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            F A + +  P   + +   Q   +  +   I       +   ++ G P      
Sbjct: 320 TFVADVAQFTPKTVETEEERQKLMF-RIKAHIAPELLRQHIEHVKTGLPGMAYVQ 373


>gi|115359249|ref|YP_776387.1| secretion protein HlyD family protein [Burkholderia ambifaria AMMD]
 gi|115284537|gb|ABI90053.1| secretion protein HlyD family protein [Burkholderia ambifaria AMMD]
          Length = 396

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 8/198 (4%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
             L R+     +    + K+ L++A+       ++    +   NA  Q DL+  +R +  
Sbjct: 94  QPLVRLDDTEASVAFAQAKAQLVQAVRQVANAKISNTMYVEAVNA-RQADLSLAQRALAA 152

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL-----EQNQRTFADEMSKL 280
            +    E +  ++    H      +ANL  A    E +R L                ++ 
Sbjct: 153 RSGASVEIVAPEELARAHAAVAGAQANLAAAQAQLEAARALGSKLPVDESPAVVQAAAQF 212

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +  +  ++ TI++P+ GT+   +S           PLM IV      +I A     QI+
Sbjct: 213 RLAYRNLKRTTIVAPVDGTV-GQRSVQVGQQVGPGVPLMSIV-QLNRLWIEANFKEGQIR 270

Query: 341 HVKKGYTATVRFPHYADI 358
           H++ G    V    Y   
Sbjct: 271 HMRIGQPVDVVSDLYGSR 288



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 1/138 (0%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPI-EISVSSSGEILNEDNVVEIKSPFSGI 66
            L        KR TL   + ++  + W     + +  V  + +     ++V++ +   G 
Sbjct: 19  ALDARRATRRKRFTLFFAVVLLAALVWIAFWLLHDRYVEDTDDAYVAGSIVQVAAQIPGA 78

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V +   +  G PL+  +D E +      K  +      +   K +        + 
Sbjct: 79  VTDVLVADTQPVRAGQPLVRLDDTEASVAFAQAKAQLVQAVRQVANAKISNTMYVEAVNA 138

Query: 127 LEKAFESREEQLLDFLGK 144
            +      +  L    G 
Sbjct: 139 RQADLSLAQRALAARSGA 156


>gi|331685930|ref|ZP_08386507.1| macrolide efflux protein MacA [Escherichia coli H299]
 gi|315297094|gb|EFU56374.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           16-3]
 gi|331076883|gb|EGI48104.1| macrolide efflux protein MacA [Escherichia coli H299]
          Length = 395

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 34/278 (12%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK-NAVSQ-NDLNQQERIVYK 225
           L   R   + R+++  + S     L   Q D      L  + + + Q NDL   E  + +
Sbjct: 52  LATGRIDAIERVNVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQCNDLRNAEAALNE 111

Query: 226 STLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              EL+      K               N       +     L   +       +KL   
Sbjct: 112 VKAELQSKQALLKQAELRFKRQLRMLRENASSHEDFESAEAMLATTRAELLSLNAKLVQA 171

Query: 284 EKT-------REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKV 334
           +          E   +++P+ G ++             +Q    I+  +   +  I+A++
Sbjct: 172 QIEVDKKKLALEYTRVVAPMDGIVIAI-VTQQGQTVNSNQSAPTIIKLARLDVMTIKAQI 230

Query: 335 TPKQIQHVKKGYTATVRFPHYA------DIREKKFKAIIEKIDPIISQQDNNLQTQE--- 385
           +   I  +  G  A  RF  ++          +  +   E +    S   N   +     
Sbjct: 231 SEADITRISVGQKA--RFSIFSEPDKHYSATLRAVELAPESVMKDDSLASNTSASGSGTS 288

Query: 386 ----YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               YY  +  + +     N + +     A+V      
Sbjct: 289 NASVYYNALFDVPNPE---NRLRIA--MTAQVTLITDE 321



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 61/142 (42%), Gaps = 11/142 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G I   + V  + +  SG +K  +V+ G  + +G  +   +D+   + +   
Sbjct: 47  IENSVLATGRIDAIERV-NVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQCNDLRNA 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVL----------EKAFESREEQLLDFLGKYHSTC 149
           + ++  ++  + ++++ L     ++              + FES E  L     +  S  
Sbjct: 106 EAALNEVKAELQSKQALLKQAELRFKRQLRMLRENASSHEDFESAEAMLATTRAELLSLN 165

Query: 150 SKVFNYGISSVYRSLKMKLTRM 171
           +K+    I    + L ++ TR+
Sbjct: 166 AKLVQAQIEVDKKKLALEYTRV 187


>gi|326427468|gb|EGD73038.1| myosin [Salpingoeca sp. ATCC 50818]
          Length = 1354

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 74/209 (35%), Gaps = 5/209 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +    ++  +++ K     I+T +     LN + +    A    EE     + K +    
Sbjct: 855  DVKQQLERSELARKEAEARIETLEMEKKELNQQLEADNVALTDAEEVRSRLVSKNNELLE 914

Query: 151  KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENK---SSLLRALLSSHQKDLTMMKNL 205
             +      +     + +  L   + +     DL+     ++L  A +S  ++ L  ++  
Sbjct: 915  DLQYVEQQLDEQMSTTEKLLAEKKHLIEELEDLKKDLGTANLNEARISRLEEQLETVRKQ 974

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +    +  +L +Q + + K   ++R ++ +         + + +   E  +   E+   
Sbjct: 975  LDDQTAANQELEEQRKKLNKELNDVRADLDQALAQKSKAQKAHKKLVSELEDATVELDHS 1034

Query: 266  LEQNQRTFADEMSKLTILEKTREQKTILS 294
              Q  +  A + S    L   R +   L+
Sbjct: 1035 RSQIAQLTAHQRSFDKQLNDERGRYEELA 1063



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 69/211 (32%), Gaps = 23/211 (10%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             +L +  I  L   ++T +  LD        LE+  +   ++L D         ++    
Sbjct: 954  ANLNEARISRLEEQLETVRKQLDDQTAANQELEEQRKKLNKELNDVRADLDQALAQ---- 1009

Query: 156  GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
              S   ++ K  ++ +    +      ++ + L A   S  K L   +  +E+ A  ++ 
Sbjct: 1010 -KSKAQKAHKKLVSELEDATVELDHSRSQIAQLTAHQRSFDKQLNDERGRYEELAKERDA 1068

Query: 216  LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE----ISRDLEQNQR 271
            L  Q R +    L L+  + E  +      +       E  + +         +LE  +R
Sbjct: 1069 LQSQNRELSTKVLTLKNELEEATDRCESTEKAKKRLQDELDDLVSSSNDAAQAELEAAKR 1128

Query: 272  --------------TFADEMSKLTILEKTRE 288
                             DE+  +   +   E
Sbjct: 1129 TLQITVDEQKQQIIELEDELQLVEQAKLRLE 1159



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 65/214 (30%), Gaps = 17/214 (7%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +D+ ++        +   L     T +  +D    +   LE   +  E+  L      
Sbjct: 1107 ELDDLVSSSN----DAAQAELEAAKRTLQITVDEQKQQIIELEDELQLVEQAKLRLEVNM 1162

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN------RLDLENKSSLLRALLSSHQKDL 199
             +   K+     +++    K      R I +          + +K+S  +  L     DL
Sbjct: 1163 SAMEKKMKEVDQTAMEEEHKKLKQLNRQIRVLEEELENERRISSKTSAEKRKLDLEMADL 1222

Query: 200  TMMKNLFEKNAVSQND-LNQQERIVYKSTLELREN---IHEQKNMLRHINELYDEANLEF 255
                   ++     +  + + E+ +     E  E+             + E   +   E 
Sbjct: 1223 KERLEEEQRGRTRDSRAVKKLEKRIALLYEEREEDSKLAESSSQEAAKLREKIKKLQAEL 1282

Query: 256  ANYLKEISRDLEQNQ---RTFADEMSKLTILEKT 286
                 E++  + + +   R   D    L +L++ 
Sbjct: 1283 DTAEDEVTSSMAKARRAEREAQDMQESLAVLQEE 1316


>gi|325924476|ref|ZP_08185996.1| multidrug resistance efflux pump [Xanthomonas gardneri ATCC 19865]
 gi|325545038|gb|EGD16372.1| multidrug resistance efflux pump [Xanthomonas gardneri ATCC 19865]
          Length = 280

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 65/201 (32%), Gaps = 20/201 (9%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + ++R +Y +    + + S     L S + D    K+L    A+S  +
Sbjct: 99  ALQQAEANLAKTVRQVRGLYRSVEGAQAELSSREVTLRSARADFARRKDLAASGAISNEE 158

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L                     +  L         +   F      +      NQ     
Sbjct: 159 L------------------AHSREELAAAEAAVSGSRESFERNRALVDDGAVANQPDVQT 200

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             ++L        +  +++P++G +   +S       Q    LM +VP  +  ++ A   
Sbjct: 201 AAAQLRQAYLNHARTGVIAPVSGYVAR-RSAQLGQRVQPGSVLMAVVPL-EQVWVEANFK 258

Query: 336 PKQIQHVKKGYTATVRFPHYA 356
             Q++H++ G    +    Y 
Sbjct: 259 ETQLKHMRLGQPVELHSDLYG 279



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 75/215 (34%), Gaps = 21/215 (9%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILL-----PIEISVSSSGEILNEDNVVEIKSP 62
                  A+L+ + ++ I+ IIGL+ W  L+       + +         + N V+I   
Sbjct: 14  AAPSKRRAALRIVAIVVILAIIGLVVWYFLVGRWHEDTDDA-------YVQGNQVQITPM 66

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +     E+G ++ +G  L+  +  +T        V+++    ++      +  L  
Sbjct: 67  VGGTVVSIGAEDGMRVERGQLLVQLDPADTA-------VALQQAEANLAKTVRQVRGLYR 119

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLD 180
             +  +    SRE  L      +        +  IS   +  S +       ++  +R  
Sbjct: 120 SVEGAQAELSSREVTLRSARADFARRKDLAASGAISNEELAHSREELAAAEAAVSGSRES 179

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            E   +L+     ++Q D+        +  ++   
Sbjct: 180 FERNRALVDDGAVANQPDVQTAAAQLRQAYLNHAR 214


>gi|323166927|gb|EFZ52666.1| hlyD family secretion family protein [Shigella sonnei 53G]
          Length = 369

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 57  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 116

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 117 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 176

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 177 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 233

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 234 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 289

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 290 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 338


>gi|261343369|ref|ZP_05971014.1| macrolide efflux protein MacA [Providencia rustigianii DSM 4541]
 gi|282568508|gb|EFB74043.1| macrolide efflux protein MacA [Providencia rustigianii DSM 4541]
          Length = 369

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 67/194 (34%), Gaps = 14/194 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   V ++G++     V ++ +  SG ++   V+ G  + +G  L   +  +  + +   
Sbjct: 45  LNKQVLATGKLDAVRKV-DVGAQVSGQLQTLYVKEGDVVKKGDLLAVIDPQKAQNEVTES 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCSKV--FN 154
           + +I  L  ++   K+ L      Y     L K     ++ L           ++V  + 
Sbjct: 104 QETIHELESNLALAKAELRLAEITYQRHLSLSKVQAVSQQDLDKARTDVEVKKAQVATYQ 163

Query: 155 YGISSVYRSLKMKLTRMR--SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE----- 207
             I     SL    T ++   I      +      L+       ++   +  L +     
Sbjct: 164 SQIKRNQASLDTAKTNLKYTQITAPMDGIVTFIKTLQGQTVIAAQEAPTILTLADMDTML 223

Query: 208 -KNAVSQNDLNQQE 220
            K  VS+ D+   E
Sbjct: 224 VKAEVSEADVIYLE 237



 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 78/213 (36%), Gaps = 17/213 (7%)

Query: 212 SQNDLNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQN 269
           SQ  +++ E  +  +  ELR   I  Q+++     +   + +L+ A    E+    +   
Sbjct: 103 SQETIHELESNLALAKAELRLAEITYQRHLSLSKVQAVSQQDLDKARTDVEVKKAQVATY 162

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKL 327
           Q       + L   +   +   I +P+ G + + ++          +   ++ +      
Sbjct: 163 QSQIKRNQASLDTAKTNLKYTQITAPMDGIVTFIKTLQGQTVIAAQEAPTILTLA-DMDT 221

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++A+V+   + +++ G    V F        KKF   ++     I      +    +Y
Sbjct: 222 MLVKAEVSEADVIYLEPGQ--NVSFTVLGAPD-KKFAGKLK----DILPTPEKINDAIFY 274

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               ++ +     + ++L+    A+V    ++ 
Sbjct: 275 YARFEVPNP---QHLLKLQ--MTAQVTIDLESR 302


>gi|152982001|ref|YP_001355170.1| ABC export system, membrane fusion protein [Janthinobacterium sp.
           Marseille]
 gi|151282078|gb|ABR90488.1| ABC export system, membrane fusion protein [Janthinobacterium sp.
           Marseille]
          Length = 392

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 53/142 (37%), Gaps = 3/142 (2%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               IE +V++ G +    +V E+ +  SG + K  V+ G  + +G  L   +       
Sbjct: 44  ARGNIEATVTAIGTLQPMSSV-EVGAQVSGQVLKLHVQPGDVVKKGQLLAEIDASVLQAT 102

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +D  +     L+  +  +++     + ++D  ++  +    +L D      +  +     
Sbjct: 103 VDAGRAQQNELQAQLAEQRAQHRLSSQQHDRQQQMHKDESTRLEDVQTAEANLAAA--VA 160

Query: 156 GISSVYRSLKMKLTRMRSIYLN 177
            I+     +    + +++    
Sbjct: 161 RIAQTQARIVQTQSSLKADEAR 182



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 74/240 (30%), Gaps = 7/240 (2%)

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           ++      + D ++++   +     QN+L Q +    ++   L    H+++  +      
Sbjct: 85  VKKGQLLAEIDASVLQATVDAGRAQQNEL-QAQLAEQRAQHRLSSQQHDRQQQMHKDEST 143

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E        L      + Q Q       S L   E       I +P+ GT++   +  
Sbjct: 144 RLEDVQTAEANLAAAVARIAQTQARIVQTQSSLKADEARLGYTRIYAPMGGTVIGIDA-K 202

Query: 308 SSNYAQQ---SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                     +  LM+I        +   V+   I+ VK G  A          R     
Sbjct: 203 EGQTLNATYQTPTLMRIA-DLSAMTVWTTVSEADIRRVKAGQAAYFTTLAGDRRRWTGEV 261

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLA 423
             +    P+ +   ++       +V+         + + EL     A+V   TA    + 
Sbjct: 262 RQVLPAPPVAAATQSSPNQTPVSKVVQYTVLFDVDNKDAELLPQMTAQVSFITASARDVL 321


>gi|283779961|ref|YP_003370716.1| Multidrug resistance efflux pump-like protein [Pirellula staleyi
           DSM 6068]
 gi|283438414|gb|ADB16856.1| Multidrug resistance efflux pump-like protein [Pirellula staleyi
           DSM 6068]
          Length = 309

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 90/270 (33%), Gaps = 14/270 (5%)

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            S V +  + ++     M +      Y+    +  +    ++ L     +L     + + 
Sbjct: 48  VSLVEDIQVPALEAGALMAVEAAEGQYVQAGQVLARIDDRQSQLQRIAAELERDAAIAKA 107

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           N   +    Q    V  + +E    +  + +      E+      +  + L+     L+ 
Sbjct: 108 NDDIEVRYAQAALAVANADVERALAVDRKSSGAITPQEIQKLRLAKQRDELQIDRSKLDM 167

Query: 269 NQRTFADEMSKLT--ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                  ++ + T     +   ++ I+SPI G +V         +    +P++++V  + 
Sbjct: 168 KVAKMTADVHQATVDAAAENVLRRQIISPIDGMVVTLL-HERGEWVAAGEPVVQVV-RTD 225

Query: 327 LTYIRAKVTPKQI-QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
              +   ++  +       G    V     A  R+ +F   +  I P++       Q   
Sbjct: 226 RMRVEGFLSALEFNAEEVAGKPVMVEVT-LARDRKVQFVGRVVFISPLV-------QAGN 277

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            Y V  ++ +   +   + LR G  A +  
Sbjct: 278 KYRVRAEVENRIENGYPL-LRPGMTATMSI 306


>gi|116074083|ref|ZP_01471345.1| hypothetical protein RS9916_36572 [Synechococcus sp. RS9916]
 gi|116069388|gb|EAU75140.1| hypothetical protein RS9916_36572 [Synechococcus sp. RS9916]
          Length = 373

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 84/307 (27%), Gaps = 60/307 (19%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               I  V + +  +  R++   L   D +         +   + ++  ++NL +  A+S
Sbjct: 95  LMARIDPVSQEVSKQEARLQLQQLIDQDQQEDQLGA-IRIRQQKAEIARIRNLVKSGAIS 153

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            + L+Q+E+ +      L     +++  ++      +  + E     +            
Sbjct: 154 LDQLSQREKELSSLVDSLEARDGQREQQIQQQRARINARDEEIKRIAQ------------ 201

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR- 331
                              I +PI G +V           Q   P+  +   +    +  
Sbjct: 202 -------------------IRAPIDGCVVDRNVH-RGEVLQAGSPVFTLDAQNGQQPLES 241

Query: 332 -AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI---------------IS 375
            A       + +  G    +        R      ++  I  +               + 
Sbjct: 242 LAFFPAGDGKRLNVGQRVRISPASTKQQRHGGIDGVVLSIRQLPVNDTALIKRLGLESLL 301

Query: 376 QQDNNLQTQEYYEVI--LKITDLAFSDNN--------IELRNGFPAEVLFTAKNTTLAQE 425
           +           EV   L+      S  +        ++L  G P +V    +       
Sbjct: 302 EAVRTEPKGPLIEVKTSLQTDPSTISGYDWGGGPGPALQLSAGTPTDVRVLVEERRPISY 361

Query: 426 IIHPITD 432
           +I  + D
Sbjct: 362 VIPILRD 368



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 36/88 (40%), Gaps = 4/88 (4%)

Query: 17  LKRMTLLSIIGIIGL----ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           L+    L ++ + G       WS+   + + +S  G ++  +++  ++S  +G + +   
Sbjct: 25  LRPGQWLLLLSLGGFCVTIAVWSVFGRLPVRISGKGVLIRTNSLTVVQSETAGRLLELNN 84

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKK 100
           + G  + +G  +   + +         +
Sbjct: 85  DIGDCVKRGQLMARIDPVSQEVSKQEAR 112


>gi|118366145|ref|XP_001016291.1| Viral A-type inclusion protein repeat containing protein [Tetrahymena
            thermophila]
 gi|89298058|gb|EAR96046.1| Viral A-type inclusion protein repeat containing protein [Tetrahymena
            thermophila SB210]
          Length = 2937

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 92/242 (38%), Gaps = 25/242 (10%)

Query: 68   KKFQVENGSQILQ--GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            ++ ++++  ++ +     LL  ++  + D+ DLK +  +      + +K   +   ++ +
Sbjct: 1968 QEIKIQDLQKLKKEYDQQLLELDNKNSQDIADLKNIIEQQQEDLNNMQKDLFENTKHQEE 2027

Query: 126  VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                 FE   + +   L       +K  +     + +  K    ++R   L   DL+N+ 
Sbjct: 2028 NNNLRFELERKNIQ--LNSDLIQKNKELDQLHEQINKIEKQNQQKLRDQELKLQDLQNQK 2085

Query: 186  ------------------SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
                              + L+ ++   Q+DL  M+    +N  SQ+++N     + K  
Sbjct: 2086 KEFDLKLMEQEEKNNQYITELQKIIEQQQEDLNKMEQCLYENNGSQDEINNLRSEIEKQQ 2145

Query: 228  LELRENIHEQKNMLRHIN---ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
             EL E  +E     + +    +   E   ++ + L E    L++ Q    + + K    E
Sbjct: 2146 NELDEKSNEINQKEKELEDMFQQMQEVERQYQDKLNETESKLKELQNQNNEIIGKFEESE 2205

Query: 285  KT 286
            + 
Sbjct: 2206 QK 2207



 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 68/197 (34%), Gaps = 4/197 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL--LDFLGKYHSTCS 150
            ++I  +K  +  L+  +  +K   +    + +  +   E + E L  +    +      
Sbjct: 773 KEIITKEKEELIQLKEDLRKQKEDFNKQKQEVEKQKSELELKAENLNLISMQFEEREKEL 832

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +     +      L  K  +   I      LE K   ++    +  + +  +K       
Sbjct: 833 EEVQNTLQQQQEELSQKRKQYEQIQDKLELLEQKEQHVKEREETLAQQIEFLKEKDIYVN 892

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             + +L  +ER +     E +E     +N++   N+       +  N   E  + LEQ  
Sbjct: 893 DREQELLDKERELESLFEEQKEKEKYLENLINEQNQKLKLLEQQSINQQSEDLKLLEQQF 952

Query: 271 RTFADEMSKLTILEKTR 287
               ++  KL +LE+  
Sbjct: 953 --INEQNEKLKLLEQQL 967



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 69/202 (34%), Gaps = 2/202 (0%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E    +   +  + N    I  +   +  L    +  ++  +  E+QL D   K     S
Sbjct: 1337 EIKSNLTSYQEELDNKEEFIQKQSQDMFELQKSVNQYKQMAKKLEDQLKDLSNKSQEESS 1396

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKNLFEKN 209
                Y +      L+ K   +++       L  K SL+        +DL + ++    + 
Sbjct: 1397 -TLQYELEKNNILLEQKNKDVQAKNQEIQSLYEKISLIEKSNLQKLEDLNLVIQEEQNQR 1455

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
               Q +L Q      +   EL++ + +Q+     I +   E++         +   +E  
Sbjct: 1456 KEIQTELEQLVDKYNQDVQELQKVMDQQQEEFTQIQQQLQESSQNQQKENLNLKEQMEHL 1515

Query: 270  QRTFADEMSKLTILEKTREQKT 291
            ++    + +++   ++      
Sbjct: 1516 KQQLDQKNAEIVSKQEELLNLE 1537



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 75/204 (36%), Gaps = 13/204 (6%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D +  DL  L++  + + +   D  K+  + L      +EK     + Q  D    Y   
Sbjct: 1687 DQQQEDLQGLQQNLLGSSKIQEDKNKALTNELQQAKQEIEKMNHQLQAQHKDLEKAYQQF 1746

Query: 149  CSKVFNYGISSVYRSLKMKLTR------MRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                           +K++           SI + +         L+ ++ + Q+++ +M
Sbjct: 1747 DDSEKQNQQKLKSAEVKLQDLEAKYKDLQESIQIEQEKYSKDIEELQNIIETQQQEINLM 1806

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            +    K    +NDL+++ + +    +E++    + ++    I    D+ ++++ + L E 
Sbjct: 1807 EQNMTK---LKNDLDRKVKDLDVKNIEIQAKDSDLESAYAQI----DKIDIQYQHKLNEY 1859

Query: 263  SRDLEQNQRTFADEMSKLTILEKT 286
                ++          KL  LE  
Sbjct: 1860 ESKQQELANNNNHLEGKLIELEDK 1883



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 72/215 (33%), Gaps = 6/215 (2%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             Q    L  ++++  DL + KK     L    +     +  L    +  ++     E+ L
Sbjct: 2065 KQNQQKLRDQELKLQDLQNQKKEFDLKLMEQEEKNNQYITELQKIIEQQQEDLNKMEQCL 2124

Query: 139  LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL-SSHQK 197
             +  G      +      I      L  K   +        D+  +   +         +
Sbjct: 2125 YENNGSQDEINN--LRSEIEKQQNELDEKSNEINQKEKELEDMFQQMQEVERQYQDKLNE 2182

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY---DEANLE 254
              + +K L  +N        + E+       EL++ I +Q+ M+  +++          E
Sbjct: 2183 TESKLKELQNQNNEIIGKFEESEQKSNFHISELQKIIDQQQEMIGRMDQDLFDTSRQQEE 2242

Query: 255  FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              +   E+ R   Q ++  A+ +SK   LE   +Q
Sbjct: 2243 NNSLRMELERKTLQLEQRNAEILSKNKELESKYDQ 2277



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 88/245 (35%), Gaps = 12/245 (4%)

Query: 53   EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
            ++   EI++     +++   +    + +   ++  +  E T +    + S +N +     
Sbjct: 1452 QNQRKEIQTE----LEQLVDKYNQDVQELQKVMDQQQEEFTQIQQQLQESSQNQQKENLN 1507

Query: 113  EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV------FNYGISSVYRSLKM 166
             K  ++ L  + D       S++E+LL+         + +      F+  I     S   
Sbjct: 1508 LKEQMEHLKQQLDQKNAEIVSKQEELLNLEDMLQKIENDLKQQKHEFDLQIQKQEDSNNQ 1567

Query: 167  KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             + +++ I   + +  +     +   S   ++   +  +   N VS  +LN     + + 
Sbjct: 1568 HVDQLQKIIDEKQEEISLLQQNQQDSSLRSQEDLKILKIKLDNLVS--ELNNANEQLNEM 1625

Query: 227  TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              EL+    + K   +      ++  ++  +   +  +  E  Q        ++T L+  
Sbjct: 1626 DKELQFKDEQLKLTEKEYQMNINQLQVKQNDLQDQKKQLEEMLQEQEERYSQEITQLQNI 1685

Query: 287  REQKT 291
             +Q+ 
Sbjct: 1686 IDQQQ 1690



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 77/216 (35%), Gaps = 12/216 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             F+D E  +   LK   +K         K   + +  + +   K  E  +  +++   + 
Sbjct: 1745 QFDDSEKQNQQKLKSAEVKLQDLEAKY-KDLQESIQIEQEKYSKDIEELQ-NIIETQQQE 1802

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM---- 201
             +   +      + + R +K    +   I     DLE+  + +  +   +Q  L      
Sbjct: 1803 INLMEQNMTKLKNDLDRKVKDLDVKNIEIQAKDSDLESAYAQIDKIDIQYQHKLNEYESK 1862

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE------LYDEANLEF 255
             + L   N   +  L + E    K   EL++ I +Q+  L ++ +        +E     
Sbjct: 1863 QQELANNNNHLEGKLIELEDKYNKDVSELQKVIEQQQQDLNNLEQELYNQGSQNEETSNL 1922

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               L+++S  L++       +  +L  + +  ++  
Sbjct: 1923 RVELEKVSIQLDERNSEILIKNKELDSMYEQIDKIE 1958


>gi|22299162|ref|NP_682409.1| multidrug efflux transporter [Thermosynechococcus elongatus BP-1]
 gi|22295344|dbj|BAC09171.1| multidrug efflux transporter [Thermosynechococcus elongatus BP-1]
          Length = 402

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 50/136 (36%), Gaps = 5/136 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               + ++   SG I +  V+NG  + QG PL+  +  E   +      +I++ + +++ 
Sbjct: 58  SRQSITLQPQVSGRIAQINVQNGQFVNQGQPLILIDPSEQQAVFASNLAAIQSAQANVEN 117

Query: 113 EKSALDFLNNK-----YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            +S L  L  +       V     ++     L   G      ++ F     +   +L+  
Sbjct: 118 ARSILRALEAQRRANLATVEFNRMQAERYTALLAEGAVSKEQAQSFITSFRTAQAALQET 177

Query: 168 LTRMRSIYLNRLDLEN 183
              +R+       LE 
Sbjct: 178 EADIRAQQATIARLEK 193



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/261 (9%), Positives = 69/261 (26%), Gaps = 26/261 (9%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           ++   +              + + +S    L  +          +  Q ++         
Sbjct: 36  VKLAAVQTETLSQTAVYNASLQSRQSI--TLQPQVSGRIAQINVQNGQFVNQGQPLILID 93

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                   +S   +++     + +       LE +     A +  ++        L  + 
Sbjct: 94  PSEQQAVFASNLAAIQSAQANVENARSILRALEAQRRANLATVEFNRMQAERYTALLAEG 153

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           AVS+            +   L+E   + +     I  L                      
Sbjct: 154 AVSKEQAQSFITSFRTAQAALQETEADIRAQQATIARL---------------------- 191

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           ++      +             + +P +G +V N      ++      L+ +   ++   
Sbjct: 192 EKALLAAQANAQQQAVVLNWFQVRAPFSG-VVGNIPPKVGDFVTPQTNLLTLT-SNQPLE 249

Query: 330 IRAKVTPKQIQHVKKGYTATV 350
           +  +V  +QI  ++ G    +
Sbjct: 250 VYIQVPIEQIPRIRVGTPVEL 270


>gi|312621392|ref|YP_004023005.1| efflux transporter, rnd family, mfp subunit [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201859|gb|ADQ45186.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 388

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 92/246 (37%), Gaps = 16/246 (6%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQ 237
           +D+ +K      LL    +DL++   + +K   +++  L   +++  K + + + ++   
Sbjct: 79  VDVGDKVKKGDKLLELETQDLSIQYKIAQKQLEMAKLQLESLKKLKEKWSSQNQSSLQNS 138

Query: 238 KNMLRHIN-ELYDEANLEFAN--YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++  +   +  + ++ A+  Y  +    L++ Q   A    +       ++Q+ I S
Sbjct: 139 TAPIQSYSLNTFTSSQMQVASPGYSLDDQIKLQEKQVEIAQLNLQSIKQNMDKQQRYIKS 198

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
            I G +    +    N     Q     V   +   I   V      ++ +G  A +RF  
Sbjct: 199 QINGVVTAINAR-EGNVFSSVQLPAVTVEDPEDLQIVLNVNQYDAINISEGQKALIRF-- 255

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
                EK F   ++ + P  ++       +   +V + I      +N+  ++ GF  +V 
Sbjct: 256 ----GEKTFDGAVKMVSPAATKVITQTGAENVVKVYVDI-----LNNDGTIKPGFNVDVD 306

Query: 415 FTAKNT 420
                 
Sbjct: 307 IKLGEK 312



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 53/137 (38%), Gaps = 8/137 (5%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + K  V+ G ++ +G  LL  E  + +    + +  ++  +  +++ K   +  +++   
Sbjct: 74  VLKVFVDVGDKVKKGDKLLELETQDLSIQYKIAQKQLEMAKLQLESLKKLKEKWSSQ--- 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRLDLENKS 185
                +S  +     +  Y           ++S   SL  ++  + + + + +L+L++  
Sbjct: 131 ----NQSSLQNSTAPIQSYSLNTFTSSQMQVASPGYSLDDQIKLQEKQVEIAQLNLQSIK 186

Query: 186 SLLRALLSSHQKDLTMM 202
             +       +  +  +
Sbjct: 187 QNMDKQQRYIKSQINGV 203


>gi|262282998|ref|ZP_06060765.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
 gi|262261250|gb|EEY79949.1| conserved hypothetical protein [Streptococcus sp. 2_1_36FAA]
          Length = 417

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 103/295 (34%), Gaps = 31/295 (10%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL--------LTFEDIETTDLIDL 98
           SGE+   ++      P  G +K+  V+NG  + QG PL        LT +  +       
Sbjct: 65  SGEVAPNNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLFSYVTSQELTAQSAQYDAQAKS 124

Query: 99  KKVSIKNLRCHIDTE-----KSALDFLNNKY-----DVLEKAFESREEQLLDFLGKYHST 148
             +S       I  E      + L+ L  KY     + L    +S E+++   L   +S 
Sbjct: 125 NSISTAQSNASIKWETYNRKLANLNSLREKYNANNDESLLDQIKSAEDEVAQSLSDANSA 184

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-----LENKSSLLRALLSSHQKDLTMMK 203
            ++V N  I +       +    R  Y          + + +  L     + +++   ++
Sbjct: 185 DNEVKNAQIEAEKAQATAQTESDRMKYDTVTADTAGTITSMNEDLPTQSKAKKEEENFIE 244

Query: 204 NLFE-----KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            + +     K  VS+ D  + +       ++ +    +    +  +  L  +A       
Sbjct: 245 IMDKSKTFVKGNVSEFDREKLQVGQKVEVVDRKNPKKKWTGTVTQVGTLTADAAANGNKQ 304

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTI-LSPIAGTIVYNQ--SFSSSN 310
            +E     +   +   D+   + ++        I  +P AG +V N+   F+ + 
Sbjct: 305 QQENPNQAKYPYKVELDQAENMPLIGSHTYVNVIENAPEAGKVVVNKSYVFTENG 359



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 62/171 (36%), Gaps = 20/171 (11%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +++L  I    DE     ++       +++  Q       +         +  T+ +  A
Sbjct: 161 ESLLDQIKSAEDEVAQSLSDANS-ADNEVKNAQIEAEKAQATAQTESDRMKYDTVTADTA 219

Query: 298 GTIVYNQ--SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           GTI        + S   ++ +  ++I+     T+++  V+    + ++ G    V     
Sbjct: 220 GTITSMNEDLPTQSKAKKEEENFIEIM-DKSKTFVKGNVSEFDREKLQVGQKVEV----- 273

Query: 356 ADIREK--KFKAIIEKIDPIIS---------QQDNNLQTQEYYEVILKITD 395
            D +    K+   + ++  + +         QQ+N  Q +  Y+V L   +
Sbjct: 274 VDRKNPKKKWTGTVTQVGTLTADAAANGNKQQQENPNQAKYPYKVELDQAE 324


>gi|157413678|ref|YP_001484544.1| membrane fusion protein [Prochlorococcus marinus str. MIT 9215]
 gi|157388253|gb|ABV50958.1| possible membrane fusion protein [Prochlorococcus marinus str. MIT
           9215]
          Length = 353

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 57/299 (19%), Positives = 106/299 (35%), Gaps = 35/299 (11%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D+++K    R   +L  L  +    +  F    S       +++   + I  + ++   +
Sbjct: 3   DLIKKNINLRSGIILLSLTIFFVFITNSFKKNKSKDISDFVVQVE--KGILSDSINTSGE 60

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQ---ERIVYKSTLELRENIHEQKNM 240
              +R      +K   + +   ++   V ++ +      E  +YK   EL  N  +QK+ 
Sbjct: 61  VKAIRTSNIGPRKQGVIKEINVDEGDLVKKDQVLASLDDEDFIYKIE-ELELNFEKQKSE 119

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                 LY E  +   +Y           +  +    +KL   +  +    I +P  G I
Sbjct: 120 FLRREYLYQEGAVSKEDYESY--------KNNYNISSAKLNDAKAEKSFYLIKAPYGGKI 171

Query: 301 VYNQSFSSSNYAQQSQPLMK-------IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
              +     +Y   S  L         I   S+   I AKV    I  +K G  A+VR  
Sbjct: 172 TA-KYAEIGSYVTPSTNLSSDPKTKNFIFELSEGLEIVAKVPESDIGRIKIGQEASVRIE 230

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
            Y   +     A+++KI     + +N       +EV L      F D   E++ G  A+
Sbjct: 231 AYPSKKY---SAVVKKIATRAVKDNNVTS----FEVTLN-----FKDIFEEIKIGMTAD 277



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 27/71 (38%), Gaps = 5/71 (7%)

Query: 49  EILNEDNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            I     V  I+         G+IK+  V+ G  + +   L + +D +    I+  +++ 
Sbjct: 54  SINTSGEVKAIRTSNIGPRKQGVIKEINVDEGDLVKKDQVLASLDDEDFIYKIEELELNF 113

Query: 104 KNLRCHIDTEK 114
           +  +      +
Sbjct: 114 EKQKSEFLRRE 124


>gi|92113558|ref|YP_573486.1| secretion protein HlyD [Chromohalobacter salexigens DSM 3043]
 gi|91796648|gb|ABE58787.1| secretion protein HlyD [Chromohalobacter salexigens DSM 3043]
          Length = 358

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/203 (11%), Positives = 65/203 (32%), Gaps = 1/203 (0%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           + +V + G    E   ++I +   G + + +V  G  +  G  L   +           +
Sbjct: 35  DENVIARGNGRMEATEIDIATKLGGRVAEIRVGEGEFVSPGQILARMDTRALEAESRQAR 94

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++ +R  + T  + +    +     E     R+ +L     ++  + + V  + IS  
Sbjct: 95  AELQRMRNALQTAHAQVAQSESTKAAAEAVVHQRQAELTAARKRHERSQALVQRHSISRQ 154

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK-DLTMMKNLFEKNAVSQNDLNQQ 219
                + + +     L     +  ++    + +  Q  +     +  + N          
Sbjct: 155 QADDDLAVMQSAEAALAAARAQVAAAQAAIVAARSQVIEAQSAIDAADANVARIQADLDD 214

Query: 220 ERIVYKSTLELRENIHEQKNMLR 242
            R+       ++  + E   +L 
Sbjct: 215 SRLQADRLARVQYRVAEPGEVLA 237


>gi|82546423|ref|YP_410370.1| multidrug resistance protein MdtN [Shigella boydii Sb227]
 gi|81247834|gb|ABB68542.1| putative membrane protein [Shigella boydii Sb227]
 gi|320183132|gb|EFW57992.1| Inner membrane component of tripartite multidrug resistance system
           [Shigella flexneri CDC 796-83]
 gi|332087845|gb|EGI92971.1| multidrug resistance protein mdtN [Shigella boydii 3594-74]
          Length = 343

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 91/259 (35%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                 D+   QR   +    LT L    E  T+ +P  G ++ 
Sbjct: 181 AVSGV-----------------DVLVAQRAAVEADIALTKL--HLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPNDGGL 295



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSSL--------LRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDVLVAQRAAVEADIALTK 203


>gi|310657529|ref|YP_003935250.1| RNS family efflux transporter MFP subunit [Clostridium sticklandii
           DSM 519]
 gi|308824307|emb|CBH20345.1| putative Efflux transporter, RND family, MFP subunit precursor
           [Clostridium sticklandii]
          Length = 411

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 89/268 (33%), Gaps = 24/268 (8%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS--IYLNRLDLENKSSLLRALLSSHQK 197
           + +        K     +S+  +S+  +    +S         L    ++ +  ++  + 
Sbjct: 81  ELIASMDDVDLKNQKSQLSAQLKSVGGQQAMSKSPVYDSQVESLNIAIAMGKDQIARLET 140

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                K L++  A+ + +    E  ++ +  +++    E          L  E+  E   
Sbjct: 141 SYERAKALYDSGAIPKVEFEAAENALHDAKNQVKLKESEL--------ALIYESAAEKPG 192

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                S   E  Q        KL        +  I +P +G I  + + S   +     P
Sbjct: 193 TSTYYSGQKEALQAQIRTIDEKLA-------KTKIYAPASGVITKSNAKS-GAFVSTMTP 244

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++++   +  T  RA V  +    +K G   TV         EK +   I KI    +  
Sbjct: 245 IIELS-SATQTVARANVLVQDAAALKLGQNVTV--TQKIRNEEKHYPGTIVKISDYANTM 301

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIEL 405
            + L  +   E  +++     S+  + L
Sbjct: 302 QSPLGLE---EQRVEVDVAFQSEEKLFL 326


>gi|322435151|ref|YP_004217363.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX9]
 gi|321162878|gb|ADW68583.1| secretion protein HlyD family protein [Acidobacterium sp. MP5ACTX9]
          Length = 412

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/345 (13%), Positives = 99/345 (28%), Gaps = 46/345 (13%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N +EI    SG +    + +   I QG PL   +       +        +L   I 
Sbjct: 60  VRANYIEIAPEVSGRLVDLPIRDNEYIKQGDPLFLIDPRPYEYALKQALSDQDDLEQQII 119

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +  +    +          S +  +           + V                   
Sbjct: 120 DARRHIAAQASAAQAARATLVSSQTGIQTAGSTVDVASATVSRA---------------- 163

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                     +       A L     +L  ++ L +K  V+   ++Q    V  +     
Sbjct: 164 ----------KASVEAADAQLKLATNNLHRIEPLLKKQYVTVEQIDQANTTVRVAQGSYD 213

Query: 232 ENI------------HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E +               + +         EA L  A +  +    L   + + A   +K
Sbjct: 214 EAVAALNVAQAQQQQASHRKVEASAQANESEARLGQAIHAIDTVDTLVSQRPSKA---AK 270

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           +       E+  +++P    +      S   YA+  Q +  ++  ++  Y+ A     ++
Sbjct: 271 VDSARLDLERTKVVAPFNAYVTNMNI-SQGAYARPGQAMFTLI-DTRTWYVIANYRESKL 328

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +++       V    + D R   F  I+E I   +  +D  +   
Sbjct: 329 KNIHLNDHVDVFVMGHPDRR---FNGIVESIGYGVFPEDGAVAGG 370


>gi|238764437|ref|ZP_04625386.1| HlyD family secretion protein [Yersinia kristensenii ATCC 33638]
 gi|238697353|gb|EEP90121.1| HlyD family secretion protein [Yersinia kristensenii ATCC 33638]
          Length = 349

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/263 (12%), Positives = 87/263 (33%), Gaps = 26/263 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E +   R + L       +    +     +     +   +   + +   N      + 
Sbjct: 67  VTENSKVQRGDLLFTIEPDLYRLQVEQAQAELKMAEAARDTQQRTVVAEQSNAAITNEQI 126

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              +A L    + L  ++ L  K  V+   ++      + + + L++ + +       ++
Sbjct: 127 VRAQANLRLATQTLARLQPLLPKGYVTAQQVDDAATAKHDAEVSLKQALKQSFAAEALVS 186

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                                  ++       + L I E+      + +P  G +V    
Sbjct: 187 ST-------------------AASEALVVARRAALAIAERELANTQVRAPHDGRVVGLTV 227

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
            ++  +    Q +  ++ +++  +  A     +++H+K G  ATV        R++  + 
Sbjct: 228 -AAGEFVVPDQAIFTLI-NTEHWHASAFFRETELKHIKVGDCATVYVMA---DRQRAIQG 282

Query: 366 IIEKIDPIISQQD--NNLQTQEY 386
            +E I   +S +D  N  +   Y
Sbjct: 283 RVEGIGWGVSSEDMLNIPRGLPY 305


>gi|149190149|ref|ZP_01868425.1| Membrane-fusion protein [Vibrio shilonii AK1]
 gi|148836038|gb|EDL52999.1| Membrane-fusion protein [Vibrio shilonii AK1]
          Length = 371

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 67/209 (32%), Gaps = 18/209 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V + D  +  + + +  L   +   E+   + ++ +    A+    +   +         
Sbjct: 95  VRKGDSVKAGQSIAQIDLGDLQIRLERAQAMLNVRQQEFNASKSLKSKGLQGEVAYSTAA 154

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +  + ++  +      ++ +P  G + +       ++     P+  ++   +   I
Sbjct: 155 ANLTEAKAMVSAAKLALRNTSVKAPFTGIVDHLYI-ELGDFVSVGDPVATLI-DLETLII 212

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A V+ + IQ +     + +RF     I   +    +  I  + S+  N           
Sbjct: 213 EADVSERHIQQLVTSQPSQIRF-----INGDEVTGKLRYISRVSSESTNTF--------- 258

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               ++   + N  +  G  AEV      
Sbjct: 259 --PIEIEVPNPNQRIPAGISAEVELALDE 285



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 74/203 (36%), Gaps = 21/203 (10%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +K+PF+GI+    +E G  +  G P+ T  D+ET  LI    VS ++++  + ++ S + 
Sbjct: 176 VKAPFTGIVDHLYIELGDFVSVGDPVATLIDLET--LIIEADVSERHIQQLVTSQPSQIR 233

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           F+N      +  + SR                       + +   +++ L    +I +  
Sbjct: 234 FINGDEVTGKLRYISRVSSESTNTFPIEIEVPNPNQRIPAGISAEVELALDEQLAIKITP 293

Query: 179 LDL--------------ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
             L              EN+ + +   L   ++D   +  L +     Q D+    +   
Sbjct: 294 AMLALDESGNLGVKTLKENRVAFIPIQLVKAEQDGVWLTGLGK-----QVDIIVLGQGFV 348

Query: 225 KSTLELRENIHEQKNMLRHINEL 247
           +    +     EQ N +    E 
Sbjct: 349 RDGDSVEAISVEQANQIAQQQEQ 371


>gi|293412907|ref|ZP_06655575.1| auxiliary transporter [Escherichia coli B354]
 gi|291468554|gb|EFF11047.1| auxiliary transporter [Escherichia coli B354]
          Length = 355

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAVVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|126662947|ref|ZP_01733945.1| cation efflux system protein/acriflavin resistance protein B family
           [Flavobacteria bacterium BAL38]
 gi|126624605|gb|EAZ95295.1| cation efflux system protein/acriflavin resistance protein B family
           [Flavobacteria bacterium BAL38]
          Length = 387

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 10/175 (5%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            N   Q      + +   E      +          Q +  +  +M  +  ++    + T
Sbjct: 137 SNQLAQMETQATLAKTTFERQKNLWDQKIGSEIQFLQAKTNYEAQMKAVAQMKAQVAKTT 196

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P +G I               QPLM+IV  +   Y+ + +    I  +K G    V 
Sbjct: 197 VKAPFSGVIDEV-IIDKGQVVAPGQPLMRIVNLAD-MYVTSNIPESFIGKIKVGAFVDV- 253

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
              Y     K +K  + ++   I+  + N       EV +  TD     N + + 
Sbjct: 254 ---YVKSIGKTYKGKVRQVGNYINPNNRNFSI----EVAVPNTDKLLRPNQVAVL 301



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/107 (12%), Positives = 35/107 (32%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++ +  V+ G  + +G  L   +D   ++ +   +      +   + +K+  D      
Sbjct: 109 GVLNQVYVKAGQNVTKGQILARIDDGGLSNQLAQMETQATLAKTTFERQKNLWDQKIGSE 168

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
               +A  + E Q+                   S V   + +   ++
Sbjct: 169 IQFLQAKTNYEAQMKAVAQMKAQVAKTTVKAPFSGVIDEVIIDKGQV 215


>gi|118475587|ref|YP_891933.1| macrolide-specific efflux protein MacA [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414813|gb|ABK83233.1| macrolide-specific efflux protein MacA [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 394

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 65/140 (46%), Gaps = 3/140 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  SV + GE+  E N+V++ +  SG IK+  V+ G ++ +G  +   + I+  + +D
Sbjct: 38  GNLTQSVEAVGEVFAE-NLVDVGAQVSGQIKELYVKVGDKVKKGDKIAQIDSIKQQNTLD 96

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            +  +++ L   + + K +L+    +Y+  E     +    ++ L  Y +T S + N  +
Sbjct: 97  QQLAALEILNAKLKSAKISLNIAEIQYNR-ELRLAEQNATSVENLENYKNTLS-LQNASL 154

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
             +   +K     + +   N
Sbjct: 155 KEIEAQIKQTQIEISTARTN 174



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 95/295 (32%), Gaps = 36/295 (12%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           L +      +VF   +  V   +  ++  +      ++  + K     A + S ++  T+
Sbjct: 40  LTQSVEAVGEVFAENLVDVGAQVSGQIKEL----YVKVGDKVKKGDKIAQIDSIKQQNTL 95

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L         ++   +    K +L + E  + ++  L   N    E    + N L  
Sbjct: 96  DQQLAA------LEILNAKLKSAKISLNIAEIQYNRELRLAEQNATSVENLENYKNTLSL 149

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            +  L++ +        +++          I +P  G  V +           +Q    +
Sbjct: 150 QNASLKEIEAQIKQTQIEISTARTNLNYTDIRAPFDGV-VVSVPVEVGQTLNANQTTPTL 208

Query: 322 VPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           V  +      IR +++   +  +  G      +   +DI  KK+   +  IDP ++   +
Sbjct: 209 VNIADLSKMEIRMQISEGDVPKISIGDRVE--YTILSDIN-KKYTGSLTSIDPGLTTLSD 265

Query: 380 N---------------LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                             +  YY   LK+ + +       LR G   +     K 
Sbjct: 266 GKYKTTSSSSGSSSSSGSSAVYYYAKLKVDNSSEF-----LRIGMTTQNTIIIKE 315


>gi|29346268|ref|NP_809771.1| hypothetical protein BT_0858 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|298385628|ref|ZP_06995186.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           1_1_14]
 gi|29338163|gb|AAO75965.1| putative ABC transporter permease [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|298261769|gb|EFI04635.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           1_1_14]
          Length = 416

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 110/314 (35%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTCSK 151
            + I + +V   N   ++D E      L  K +  E  + ES   +    L +  +    
Sbjct: 45  AENIQIAEVKEDNFMEYVDVEGLIQPILTIKINTREAGSVESIVGEEGSLLYQGDTIIVL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + S+         +M +     +++E KS  L+    ++  +L  +K        
Sbjct: 105 SNPDLLRSIEDQRDEWEKQMITYQEQEIEMEQKSLNLKQQALTNNYELERLK-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        + +  + E +   +  N    + +L   + +  I ++L +N R
Sbjct: 157 -KSIALDREEFQMGVKSKAQLQVAEDEYNYKLKNAALQQESLRHDSAVTMIRKELIRNDR 215

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  K     +      + +PI G + + +  +        + + +I        I 
Sbjct: 216 ER--ERKKYERTHERLNNLVVTAPIKGQLSFVRV-TPGQQVSSGESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPIISQQ-DNNLQTQE 385
             ++   I  +  G  ATV +    Y     K    + ++   +D + +    +N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATVNYQGKKYPLKITKVVPEVKDRMFDVDLVFTGDMPDNVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPERA 345


>gi|269836992|ref|YP_003319220.1| efflux transporter, RND family, MFP subunit [Sphaerobacter
           thermophilus DSM 20745]
 gi|269786255|gb|ACZ38398.1| efflux transporter, RND family, MFP subunit [Sphaerobacter
           thermophilus DSM 20745]
          Length = 331

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 51/167 (30%), Gaps = 20/167 (11%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E  +      + L + QR   D  + L           IL+P AGT++  Q+ +      
Sbjct: 127 EQLSARLTAEQQLREAQRALDDARAALDA-------SMILAPRAGTVLQVQT-AEGAPLG 178

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               + +I   +    +  +V   +I        A V F        +  +  +E+I P 
Sbjct: 179 TGAEVAQIADLND---LELQVDLDEIDLPHVPLDAPVTFT-LDAYPSEDIEGRLERISPT 234

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                        +   ++ T        +  R G  A+V       
Sbjct: 235 AETSGGTTT----FRATVRFT----LPEGLVARPGMNADVSIKTAVR 273



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 19/152 (12%), Positives = 52/152 (34%), Gaps = 3/152 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V + G ++   N + ++S  SG ++   V  G  + +G  +   +     + I   
Sbjct: 44  LEATVETVGRLVP-RNPITVRSTVSGRVQLVAVSPGDVVEEGDVIAQLDPEPFEEAIRRA 102

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +      ++  +       +   +   A  + E+QL +         + +    I +
Sbjct: 103 EDQVAAAEAALNLAEQRAGDNPSPEQL--SARLTAEQQLREAQRALDDARAALDASMILA 160

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                 +++       L       + + L  L
Sbjct: 161 PRAGTVLQVQTAEGAPLGTGAEVAQIADLNDL 192


>gi|227548932|ref|ZP_03978981.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078957|gb|EEI16920.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 551

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/322 (12%), Positives = 95/322 (29%), Gaps = 11/322 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDI-ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++   V  G ++     LL  +       L   ++         +   ++A   LN   D
Sbjct: 94  VENVAVAVGDRVSVDQFLLEMDSTAAEAQLAQQQQQQANAQADAVQAAEAAQSQLNAVRD 153

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            + +       Q    + +  +          +    +   ++ R     ++    +   
Sbjct: 154 QINRGTHPAIAQAQAAVNQAQAAYDAAVAGQGAVAMDASVNQIKRFIG-DISSGGAQPVP 212

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               A                E+  + Q    Q++ +  +     + ++ + +  LR   
Sbjct: 213 QPAPAPQPGPVPVPVPQPAPEERQLIQQRIAEQEQAVQAQQQAASQLSVAQAEAALREAY 272

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL--TILEKTREQKTILSPIAGTIVYN 303
              + A  + A    ++    +   R      +      LE   +  T+ +P+ G +   
Sbjct: 273 AQLEVARTQAAQERDQLKLQADSAWRKAETASNATGDGSLEYQVQSATVYAPMGGLVTSV 332

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +  +       L+ I        IR +V    +  +K G   T           K++
Sbjct: 333 DV-TEGDV--PQGKLLTIA-DDSRLLIRTRVREGDMPSIKTGNRVTFTSTA---TGSKEY 385

Query: 364 KAIIEKIDPIISQQDNNLQTQE 385
              +  I P+ S  + N Q  +
Sbjct: 386 TGRVSWISPVGSAGEANPQGGQ 407


>gi|194446864|ref|YP_002038986.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|222104922|ref|YP_002539411.1| macrolide-specific efflux protein etsA [Escherichia coli]
 gi|300905118|ref|ZP_07122922.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           84-1]
 gi|301306711|ref|ZP_07212767.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           124-1]
 gi|194358616|gb|ACF57059.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|221589347|gb|ACM18344.1| macrolide-specific efflux protein etsA [Escherichia coli]
 gi|300402987|gb|EFJ86525.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           84-1]
 gi|300838070|gb|EFK65830.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           124-1]
 gi|301130395|gb|ADK62196.1| putative transport system efflux protein EtsA [Salmonella enterica
           subsp. enterica serovar Kentucky]
 gi|301130524|gb|ADK62324.1| putative transport system efflux protein EtsA [Salmonella enterica
           subsp. enterica serovar Kentucky]
 gi|315252827|gb|EFU32795.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           85-1]
 gi|323948628|gb|EGB44538.1| efflux transporter [Escherichia coli H252]
          Length = 395

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 34/278 (12%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK-NAVSQ-NDLNQQERIVYK 225
           L   R   + R+++  + S     L   Q D      L  + + + Q NDL   E  + +
Sbjct: 52  LATGRIDAIERVNVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQCNDLRNAEAALNE 111

Query: 226 STLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              EL+      K               N       +     L   +       +KL   
Sbjct: 112 VKAELQSKQALLKQAELRFKRQLRMLRENASSHEDFESAEAMLATTRAELHSLNAKLVQA 171

Query: 284 EKT-------REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKV 334
           +          E   +++P+ G ++             +Q    I+  +   +  I+A++
Sbjct: 172 QIEVDKKKLALEYTRVVAPMDGIVIAI-VTQQGQTVNSNQSAPTIIKLARLDVMTIKAQI 230

Query: 335 TPKQIQHVKKGYTATVRFPHYA------DIREKKFKAIIEKIDPIISQQDNNLQTQE--- 385
           +   I  +  G  A  RF  ++          +  +   E +    S   N   +     
Sbjct: 231 SEADITRISVGQKA--RFSIFSEPDKHYSATLRAVELAPESVMKDDSLASNTSASGSGTS 288

Query: 386 ----YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               YY  +  + +     N + +     A+V      
Sbjct: 289 NASVYYNALFDVPNPE---NRLRIA--MTAQVTLITDE 321



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 62/142 (43%), Gaps = 11/142 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G I   + V  + +  SG +K  +V+ G  + +G  +   +D+   + +   
Sbjct: 47  IENSVLATGRIDAIERV-NVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQCNDLRNA 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVL----------EKAFESREEQLLDFLGKYHSTC 149
           + ++  ++  + ++++ L     ++              + FES E  L     + HS  
Sbjct: 106 EAALNEVKAELQSKQALLKQAELRFKRQLRMLRENASSHEDFESAEAMLATTRAELHSLN 165

Query: 150 SKVFNYGISSVYRSLKMKLTRM 171
           +K+    I    + L ++ TR+
Sbjct: 166 AKLVQAQIEVDKKKLALEYTRV 187


>gi|114777272|ref|ZP_01452283.1| acriflavin resistance protein E precursor; probable RND efflux
           membrane fusion protein precursor [Mariprofundus
           ferrooxydans PV-1]
 gi|114552417|gb|EAU54900.1| acriflavin resistance protein E precursor; probable RND efflux
           membrane fusion protein precursor [Mariprofundus
           ferrooxydans PV-1]
          Length = 381

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 102/267 (38%), Gaps = 36/267 (13%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQ-KDLTMMKNLFEKNAVS 212
             +++ Y+  + +L+ + +I   R  DL ++ + + + +   Q  D+   K L E    +
Sbjct: 50  STVTAAYQQWQPRLSAVGNITAMRGTDLSSEVAGIVSAIHFKQGADIEKGKLLVE--LDA 107

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            +D+ + + +  K++ EL +   ++      I  +  +        LK+   ++ + Q  
Sbjct: 108 DSDIARLQSL--KASAELAKTTLQRDKAQFQIKAISRQVLDTDEASLKQAQANVAEQQA- 164

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                          ++K I +P +G  +  ++     Y      +M  +      Y+  
Sbjct: 165 -------------IVDKKMIRAPFSGR-LGIRAVDVGQYLSAG-TVMVTLQALDPIYLDF 209

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            +  + +  ++ G T T     +  +    F   IE I+P +     N+      +V  +
Sbjct: 210 YLPQQALSSIQVGQTVTATTDAWPGMT---FTGKIEVIEPRVDASTRNV------KVRAR 260

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +      + + +L  G  A+V  T+  
Sbjct: 261 VD-----NADHKLLPGMYAQVEVTSGQ 282



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 39/119 (32%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+     + G+ I +G  L+  +       +   K S +  +  +  +K+         
Sbjct: 83  GIVSAIHFKQGADIEKGKLLVELDADSDIARLQSLKASAELAKTTLQRDKAQFQIKAISR 142

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            VL+    S ++   +   +      K+     S       + + +  S     + L+ 
Sbjct: 143 QVLDTDEASLKQAQANVAEQQAIVDKKMIRAPFSGRLGIRAVDVGQYLSAGTVMVTLQA 201


>gi|39995935|ref|NP_951886.1| CzcB family heavy metal efflux protein [Geobacter sulfurreducens
           PCA]
 gi|39982699|gb|AAR34159.1| heavy metal efflux pump, CzcB family [Geobacter sulfurreducens PCA]
          Length = 423

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 87/281 (30%), Gaps = 49/281 (17%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E   D         S       +S+  S+      +    +   +  N+    +  L+  
Sbjct: 106 EANADRTAHVSPRISGKIVSVRASLGDSVAAGQPLVTLDSVELGEALNRYHQSKTRLALA 165

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q ++  +K L EK   ++ D+ Q E     +  EL  +                      
Sbjct: 166 QSNMDRIKALVEKKIAARKDILQAETDYTMAQTELHTD---------------------- 203

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                      E+    +    S LT     +    + SPI G I    +      A  S
Sbjct: 204 -----------EERLALYGVSASDLTNARHRKPLLPVRSPIGGVITEKHAI-VGELADPS 251

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + L   V      ++   +  K +  V +G +ATV    + D++    K  I  I  ++ 
Sbjct: 252 KSLFT-VADLSSVWVMVDINEKDLAKVHRGQSATVTLGAFPDVK---LKGRITYIADLVD 307

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                +      +  +++ + A      +L+    A V  T
Sbjct: 308 VSTRTV------KARVEVPNPAR-----KLKPEMFATVELT 337



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 2/122 (1%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            +   +S++G++    +     SP  SG I   +   G  +  G PL+T + +E  + ++
Sbjct: 94  RLAGVISATGKVEANADRTAHVSPRISGKIVSVRASLGDSVAAGQPLVTLDSVELGEALN 153

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
               S   L     +    +  L  K     K     E        + H+   ++  YG+
Sbjct: 154 RYHQSKTRL-ALAQSNMDRIKALVEKKIAARKDILQAETDYTMAQTELHTDEERLALYGV 212

Query: 158 SS 159
           S+
Sbjct: 213 SA 214


>gi|77361959|ref|YP_341533.1| putative efflux pump or secretion protein [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76876870|emb|CAI89087.1| putative efflux pump or secretion protein [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 355

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 50/338 (14%), Positives = 105/338 (31%), Gaps = 85/338 (25%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
             R   LS++G I +  + ++  I + V+    + +   VV+I    SG + K  V N  
Sbjct: 7   FARYVRLSLVGFILVFLYYVIADIWLPVTPQARVYHP--VVQISPQISGRVTKVLVSNNQ 64

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G  L   +       ++  K+++ + +                             
Sbjct: 65  PVKAGDILFEIDQSTYLLAVEQAKLTLDDAKLQ--------------------------- 97

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                            N  + +  ++L+ +++  ++    +  L+++   L    S  +
Sbjct: 98  -----------------NKRLDTNVKALEAQISAAKAKQHEQSLLKSRGEKLYKQNSISE 140

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++L  ++  F   A S++++   E  + ++ L  R    E    LRH             
Sbjct: 141 QELESIRANF---AASKSNVAAFEAQLAEAVLA-RGTSGEDNLALRHGA----------- 185

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                ++L   E       I +   G +   Q      YA   Q
Sbjct: 186 ---------------------NQLAQAELNLSYTQIRALSDGVVANLQLL-DGAYALSGQ 223

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           PL+ IV          +       ++  G  A V F  
Sbjct: 224 PLLAIVAKKADLVADFREKSLL--NMHPGSLAKVVFDS 259


>gi|260577110|ref|ZP_05845088.1| efflux transporter, RND family, MFP subunit [Rhodobacter sp. SW2]
 gi|259020688|gb|EEW24006.1| efflux transporter, RND family, MFP subunit [Rhodobacter sp. SW2]
          Length = 388

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 88/261 (33%), Gaps = 25/261 (9%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  +++ +       L  + ++  L A + S  +   +++        ++ DL Q E  
Sbjct: 60  SVGARVSGLVETLAVSLGQQVQAGDLIAQIDSMNQQNAVLQ--------AEADLAQIEAD 111

Query: 223 VYKSTLEL--RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +      +   + ++++   L   N    E+       L      +   Q   A     +
Sbjct: 112 IVAKDASIHAAQLVYDRALNLNEKNLSSTESLEAAQAALAVDKAGMLSLQAKKARAEVTI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
                  ++  I +PIAGTIV     S+       Q    IV  +      ++A ++   
Sbjct: 172 ASARLELQRTKITAPIAGTIVAI-VTSAGQTVNAVQAAPVIVKIAVLDRMVVKADISEAD 230

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP----IISQQDNNLQTQEYYEVILKIT 394
           +  V  G   +       D+      A +  I+P    I    +       YY+ +  + 
Sbjct: 231 VVQVAPGQGVSFTLLGEPDVAY---AATVRAIEPAPASIKDSDEIATDQAIYYKGLFDVD 287

Query: 395 DLAFSDNNIELRNGFPAEVLF 415
           +        +LR G  A+V  
Sbjct: 288 NPE-----GKLRIGMTAQVSI 303



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 63/178 (35%), Gaps = 24/178 (13%)

Query: 17  LKRMTLLSIIGIIGLITWSI-------------LLPIEISVSSSGEILNEDNVVEIKSPF 63
              + L+   G+ G   W               L  +E +V +SG I     +V + +  
Sbjct: 7   AGAVALVLAGGVYGWTLWRADTATAVPATVAVTLGTVEKTVLASGVIEAAS-LVSVGARV 65

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG+++   V  G Q+  G  +   + +   + +   +  +  +   I  + +++      
Sbjct: 66  SGLVETLAVSLGQQVQAGDLIAQIDSMNQQNAVLQAEADLAQIEADIVAKDASIHAAQLV 125

Query: 124 YDVL----------EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           YD             ++ E+ +  L        S  +K     ++     L+++ T++
Sbjct: 126 YDRALNLNEKNLSSTESLEAAQAALAVDKAGMLSLQAKKARAEVTIASARLELQRTKI 183


>gi|261364394|ref|ZP_05977277.1| HlyD family secretion protein [Neisseria mucosa ATCC 25996]
 gi|288567290|gb|EFC88850.1| HlyD family secretion protein [Neisseria mucosa ATCC 25996]
          Length = 351

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/301 (11%), Positives = 86/301 (28%), Gaps = 28/301 (9%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E A  +  + L +   +  S+  +           ++         +       +   
Sbjct: 60  VEEGADVNEGDILAELSSETSSSRLEEARAAELRQEEAVGRAKAAEAQMKQTVARAQANV 119

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              R  L   + +L   + L     VSQ+++ +++    ++   ++     +      + 
Sbjct: 120 DANRQQLRVAKMELDNARKLLADQLVSQSEVTKRQADYERAVAAVKAAEAARDEARATVA 179

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +         A                     + +       +   I +PIAG +     
Sbjct: 180 QSAAAQAEARAG---------------VEQARAAVKSATSANDDMNIRAPIAGRV-EYTM 223

Query: 306 FSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             + N       ++ ++ P      I   +    I  +K    A +R      +    F 
Sbjct: 224 AEAGNVVAAGSKVVSLLDPADVSMNI--FLPTDSISRLKVNDEARIRLDGIDAV----FP 277

Query: 365 AIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           A I+ I         S +  + + +  ++V L++        N  L+ G          +
Sbjct: 278 AKIKFIATDAQFTPKSVETVDERAKLMFKVKLQVPRETAVKYNRLLKGGLTGNGFVKTDD 337

Query: 420 T 420
            
Sbjct: 338 K 338


>gi|82545957|ref|YP_409904.1| hypothetical protein SBO_3595 [Shigella boydii Sb227]
 gi|81247368|gb|ABB68076.1| putative membrane protein [Shigella boydii Sb227]
 gi|332089421|gb|EGI94525.1| hlyD family secretion family protein [Shigella boydii 3594-74]
          Length = 378

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 80/244 (32%), Gaps = 9/244 (3%)

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
               Q+   + +     +++   G             R+  +  + +   +    LRA L
Sbjct: 65  PITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQL 124

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +  Q + T +    ++   +     +  +       E   +I + +      + L   + 
Sbjct: 125 TEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSE--RDIDDARQNFLAQDALVKGSV 182

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            E A    ++   +   Q       ++LT  +   EQ  I +P  G +          YA
Sbjct: 183 AEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIR-PGTYA 241

Query: 313 Q--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                +P+M  +P  K   + A+     +  +K G  A V F        + F   +  I
Sbjct: 242 AALPLRPVMVFIPEQKRQIV-AQFRQNSLLRLKPGDDAEVVFNALP---GQVFHGKLTSI 297

Query: 371 DPII 374
            P++
Sbjct: 298 LPVV 301



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 55/155 (35%), Gaps = 11/155 (7%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI-------KNLRCHID 111
           I    +GI+ +   +N   I +G  L   + +     +D  +  +       K LR  + 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 112 TEKSALDFLNNKYDVL----EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++    ++ + D L    ++  +  +  +  F  +      + F    + V  S+  +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                 +       +++   LRA L+  + +L   
Sbjct: 186 AQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQT 220


>gi|78061412|ref|YP_371320.1| HlyD family secretion protein [Burkholderia sp. 383]
 gi|77969297|gb|ABB10676.1| Secretion protein, HlyD family [Burkholderia sp. 383]
          Length = 396

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 38/101 (37%), Gaps = 4/101 (3%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 ++  +  +  ++ TI++P+ GTI   +S           PLM IV      +I 
Sbjct: 204 AVVQAAAQFKLAYRNLKRTTIVAPVDGTI-GQRSVQVGQQVGPGVPLMSIV-QLNQLWIE 261

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           A     QI+H++ G    V    Y       ++  ++    
Sbjct: 262 ANFKEGQIRHMRVGQPVEVVSDLYGSRVT--YRGRVQGFSA 300



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 31/84 (36%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            R      + +   +++ +  L   +  L  +     + +     ++V++ +   G +  
Sbjct: 22  ARRTTRRKRFIVFFAVVLVAALAWIAYWLLSDRYYEDTDDAYVAGSIVQVAAQIPGSVTD 81

Query: 70  FQVENGSQILQGTPLLTFEDIETT 93
             V +   +  G  L+  +D E +
Sbjct: 82  VVVADTQAVRAGQTLVKLDDTEAS 105


>gi|60682662|ref|YP_212806.1| putative lipoprotein [Bacteroides fragilis NCTC 9343]
 gi|60494096|emb|CAH08888.1| putative lipoprotein [Bacteroides fragilis NCTC 9343]
          Length = 355

 Score = 56.9 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 39  PIEISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
            I+  +++  +  +     V   +        SG I K  V++G+Q+ +G  L   +  +
Sbjct: 33  KIDTVIAADKQKFLQFPGRVKAAQDISLSFRVSGTINKIYVKDGAQVREGQILAELDPTD 92

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
               +D  +   + ++   +   +         +  +KA
Sbjct: 93  YQVQLDATEAEYRQVKAEAERVMALYKENGTTPNANDKA 131


>gi|126308731|ref|XP_001371505.1| PREDICTED: similar to developmental myosin heavy chain neonatal
            [Monodelphis domestica]
          Length = 1934

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 78/206 (37%), Gaps = 8/206 (3%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                    + + + L+  ++     ++  N     L+K   + ++ L +   KY  T ++
Sbjct: 1406 VNAKCASLEKTKQRLQNEVEDLMLDVERSNAACAALDKKQRNFDKVLSECKQKYEETQAE 1465

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +      S  R+L  +L +M++ Y   LD   +   L+    + Q++++ +     +   
Sbjct: 1466 LEASQKES--RALGTELFKMKNAYEESLD---QIETLKRENKNLQQEISDLTEQVAEGGK 1520

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
              ++L + ++ V +   EL+ ++ E +  L H         LE      +I R L +   
Sbjct: 1521 QLHELEKIKKQVEQEKCELQASLEEAEASLEHEEGKILRIQLELNQVKSDIDRKLAEKDE 1580

Query: 272  TFADEMS---KLTILEKTREQKTILS 294
                      ++    ++     I S
Sbjct: 1581 ELEQLKRNHIRIVESMQSTLDAEIRS 1606



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 68/198 (34%), Gaps = 1/198 (0%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               + L+   + +    I   K+ L+ L+   +      +SREE+    + +  +  ++ 
Sbjct: 1220 KSELKLEIDDLASNMEMISKAKANLEKLSRSLEDQVSELKSREEEQQRLVSELTAQRAR- 1278

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                     R L  K   +  +   +     +   L+  L    K    + +  + +   
Sbjct: 1279 LQTEAGEYSRQLDEKEILVSQLLRGKQAFTQQVEELKRQLEEESKAKNALAHALQSSRHD 1338

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             + L +Q     ++  EL+  + +    +      Y+   ++    L+E  R L Q  + 
Sbjct: 1339 CDLLREQYEEEQEAKAELQRALSKANGEVAQWRTKYETDAIQRTEELEEAKRKLAQRLQD 1398

Query: 273  FADEMSKLTILEKTREQK 290
              + +  +     + E+ 
Sbjct: 1399 AEEHVEAVNAKCASLEKT 1416



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 76/210 (36%), Gaps = 17/210 (8%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            + ++  + +  K+  I NL+  I+ E++    +  +  + E      E +      +   
Sbjct: 1071 DKVQLDEKLKKKEFEISNLQSKIEDEQAV--EIQLQKKIKELQARIEELEEEIEAERASR 1128

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              ++     +S     +  +L         ++++  K            +   M ++L E
Sbjct: 1129 AKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREA---------EFQKMRRDLEE 1179

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------YLKE 261
                 +       +    S  EL E I   + + + + +   E  LE  +       + +
Sbjct: 1180 ATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKSELKLEIDDLASNMEMISK 1239

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               +LE+  R+  D++S+L   E+ +++  
Sbjct: 1240 AKANLEKLSRSLEDQVSELKSREEEQQRLV 1269



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 84/210 (40%), Gaps = 10/210 (4%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
               +  +D         +++++   R ++   ++ ++ L    +  E++ +  E++LLD 
Sbjct: 1651 DTQIHLDDALRGQEDLKEQLAMVERRANL--LQAEIEELRATLEQTERSRKIAEQELLDA 1708

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                 S   ++ +   +S+  + K   T +  +     ++  +S            D  M
Sbjct: 1709 -----SERVQLLHTQNTSLINTKKKLETDVSQLQSEVEEVIQESRNAEEKAKKAITDAAM 1763

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            M    +K   +   L + ++ + ++  +L+  + E + +         +   +  + ++E
Sbjct: 1764 MAEELKKEQDTSAHLERMKKNMEQTVKDLQHRLDEAEQLALK---GGKKQIQKLESRVRE 1820

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +  ++E  Q+  A+ +  L   E+  ++ T
Sbjct: 1821 LEGEVESEQKRHAEAIKGLRKHERRVKELT 1850



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 71/198 (35%), Gaps = 5/198 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E  ++ +  + +       I+  K            LE+A    E        K+  + +
Sbjct: 1141 ELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEEATLQHEATAATLRKKHADSVA 1200

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     I ++ R  +        + L   DL +   ++    ++ +K   + ++L ++ +
Sbjct: 1201 E-LGEQIDNLQRVKQKLEKEKSELKLEIDDLASNMEMISKAKANLEK---LSRSLEDQVS 1256

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              ++   +Q+R+V + T +      E     R ++E       +     +  ++ +E+ +
Sbjct: 1257 ELKSREEEQQRLVSELTAQRARLQTEAGEYSRQLDEKEI-LVSQLLRGKQAFTQQVEELK 1315

Query: 271  RTFADEMSKLTILEKTRE 288
            R   +E      L    +
Sbjct: 1316 RQLEEESKAKNALAHALQ 1333


>gi|74312028|ref|YP_310447.1| hypothetical protein SSON_1512 [Shigella sonnei Ss046]
 gi|73855505|gb|AAZ88212.1| putative membrane protein [Shigella sonnei Ss046]
          Length = 299

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 70/220 (31%), Gaps = 27/220 (12%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S +     +  +   +   +S    +L +     +   V+  DL            EL
Sbjct: 44  MQSPWTRDGKIRAEQVSITPQVSGRIVELNIK----DNQLVNAGDLLLTIDKTPFQIAEL 99

Query: 231 RENIHEQKNMLRHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTI 282
                +       + +  +EAN           A  L   + +++  Q +     + L  
Sbjct: 100 NAQ-AQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQ 158

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQ 338
            +    Q  I +P++G +    +    +YA   +PL  +V       I      K+    
Sbjct: 159 TQWQLAQTEIRAPVSGRVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR--- 214

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             H+++G  A +          K  +  +  I   I  Q 
Sbjct: 215 --HIREGAPAQITL----YSDNKTLQGHVSSIGRAIYDQS 248



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 13/177 (7%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 15  MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 70

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 71  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 130

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              + D      ++ +  +         T  ++    I +        LT     Y 
Sbjct: 131 SAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSGRVTNLTTRIGDYA 187


>gi|325275399|ref|ZP_08141343.1| RND family efflux transporter MFP subunit [Pseudomonas sp. TJI-51]
 gi|324099483|gb|EGB97385.1| RND family efflux transporter MFP subunit [Pseudomonas sp. TJI-51]
          Length = 250

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 4/140 (2%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               IE SV++ G +     V ++ +  SG I+   VE G  + QG  L+  +       
Sbjct: 47  ARGNIESSVTALGTLQPRQYV-DVGAQASGQIRTLHVEVGDTVKQGQLLVEIDPSTQQAQ 105

Query: 96  IDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +D ++ +I+ L   +     E         +   +     +R+E +     K  +T +++
Sbjct: 106 LDAERYAIQTLEAQVKEQQAEHLLARQQLQRQQRMAADGATRDEDVQTAQAKVLTTQARI 165

Query: 153 FNYGISSVYRSLKMKLTRMR 172
             Y    +     ++    +
Sbjct: 166 HRYQAQILQARASLRSAEAQ 185



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 10/185 (5%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               ++R++++   D   +  LL  +  S Q+       L  +    Q    + +    +
Sbjct: 72  QASGQIRTLHVEVGDTVKQGQLLVEIDPSTQQA-----QLDAERYAIQT--LEAQVKEQQ 124

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +   L     +++  +       DE        +      + + Q       + L   E 
Sbjct: 125 AEHLLARQQLQRQQRMAADGATRDEDVQTAQAKVLTTQARIHRYQAQILQARASLRSAEA 184

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVK 343
                 I +P++GT+V   + +        Q  PL+  +       + A+V+   I  VK
Sbjct: 185 QLGYTRIFAPMSGTVVAVDARA-GQTLNAQQRTPLILRIARLSPMTVWAEVSEADIGQVK 243

Query: 344 KGYTA 348
            G  A
Sbjct: 244 PGMQA 248


>gi|322619544|gb|EFY16419.1| hypothetical protein SEEM971_16827 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622760|gb|EFY19605.1| hypothetical protein SEEM973_14130 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322628672|gb|EFY25459.1| hypothetical protein SEEM974_17768 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631609|gb|EFY28365.1| hypothetical protein SEEM201_21283 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637136|gb|EFY33839.1| hypothetical protein SEEM202_02735 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322644541|gb|EFY41081.1| hypothetical protein SEEM054_05679 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648474|gb|EFY44926.1| hypothetical protein SEEM675_17063 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322670335|gb|EFY66475.1| hypothetical protein SEEM507_19314 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|323194572|gb|EFZ79765.1| hypothetical protein SEEM581_07719 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199097|gb|EFZ84193.1| hypothetical protein SEEM501_07272 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202052|gb|EFZ87111.1| hypothetical protein SEEM460_14408 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208922|gb|EFZ93859.1| hypothetical protein SEEM020_19410 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213907|gb|EFZ98677.1| hypothetical protein SEEM6152_16125 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215241|gb|EFZ99986.1| hypothetical protein SEEM0077_11268 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323220840|gb|EGA05278.1| hypothetical protein SEEM0047_18184 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323227301|gb|EGA11469.1| hypothetical protein SEEM0055_01066 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229919|gb|EGA14042.1| hypothetical protein SEEM0052_13812 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233144|gb|EGA17240.1| hypothetical protein SEEM3312_03764 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240879|gb|EGA24921.1| hypothetical protein SEEM5258_13374 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323248735|gb|EGA32663.1| putative efflux pump membrane fusion protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251739|gb|EGA35606.1| putative efflux pump membrane fusion protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323258769|gb|EGA42426.1| putative efflux pump membrane fusion protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323267877|gb|EGA51356.1| putative efflux pump membrane fusion protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323268737|gb|EGA52197.1| putative efflux pump membrane fusion protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 331

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  + + Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLSQYRTGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   +   +  T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 185 ASLEQAKAQLAQAQLDLQDTTLIAPANGTLLT-RAVEPGSMLNAGSTVLTLS-LTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLSQTQPGRDILL---YTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIIVTDADDA-----LRQGMPVTV 322



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 94/339 (27%), Gaps = 53/339 (15%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
            TW      +  ++  G +  +   V I     G +    V+ G  I  G  L   +   
Sbjct: 21  GTWWYQSRQDDGLTLYGNV--DIRTVNISFRVGGRLASLNVDEGDAIKAGQVLGELDHAP 78

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             + +   K  +   +   D   +             +  E  +        +     ++
Sbjct: 79  YENALMQAKAGVSVSQAQYDLMLAGY-----------RDEEIAQAAAAVRQAQAAYDYAQ 127

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            F      +++S  +    + +   +R   +       A L S Q  L+  +    +  +
Sbjct: 128 NFYNRQQGLWKSRTISANDLENARSSRDQAQ-------ATLKSAQDKLSQYRTGNREQDI 180

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q           K++LE  +    Q  +      L   AN        E    L     
Sbjct: 181 AQ----------AKASLEQAKAQLAQAQLDLQDTTLIAPANGTLLTRAVEPGSMLNAGST 230

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS----------NYAQQSQPLMKI 321
                +++   +    +++ +     G       ++             +   +    + 
Sbjct: 231 VLTLSLTRPVWVRAYVDERNLSQTQPGR--DILLYTDGRPDKPYHGKIGFVSPT---AEF 285

Query: 322 VPHS-------KLTYIRAKVTPKQIQ-HVKKGYTATVRF 352
            P +            R ++        +++G   TV+F
Sbjct: 286 TPKTVETPDLRTDLVYRLRIIVTDADDALRQGMPVTVKF 324


>gi|299473300|emb|CBN77699.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 6779

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 70/201 (34%), Gaps = 4/201 (1%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
              L++   K L   +   K+  D + ++   LE+  E  ++Q+   + +  +   +    
Sbjct: 5441 ARLQEKKAKRL-AELKKVKAKDDEVQDELARLEQEAEREQKQVEADIEQEAAILEQAEAK 5499

Query: 156  GISSVYRSLKM-KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             ++      +  +LT   S     L+L+             ++     + L ++    + 
Sbjct: 5500 MLAKRAAEARATRLTAESSRRAGELELQKIRQAHEENQRILEEAQESKRKLRQRTLAERL 5559

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE-QNQRTF 273
            +  +QE+ +  S   L     +QK       E  +         +KE  ++LE   QR  
Sbjct: 5560 ERRRQEK-MNASIAALESAEAQQKLAASLEKERVEARAELEEELVKEACQELEVHAQRQA 5618

Query: 274  ADEMSKLTILEKTREQKTILS 294
              E +     +   ++    +
Sbjct: 5619 RAEHAVRMSAKNAIDEAEKRA 5639



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 67/232 (28%), Gaps = 21/232 (9%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVS----------IKNLRCH-IDTEKSALDFL-- 120
                +     L   +D E T       ++          +  LR    ++E    D L  
Sbjct: 5266 ERDVVQLEQALSGLKDTEATSQKQAAALASGEDEHPQSGLAELRARHQESENFLKDSLRA 5325

Query: 121  ------NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
                        +      R ++L           ++V     +      + +       
Sbjct: 5326 EAGARRARMRQRIAARTAERVKELTAQRRSKDEIHAEVAAIRDAGEAEENRFEAVLATEA 5385

Query: 175  YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLE-LRE 232
                      +      L   Q++   ++   E   ++   ++ +++R   +     L+E
Sbjct: 5386 EARIHAARETALAAETSLEVTQEEARDLRKNHENAMIALAAEMAEKQRRGKEGVGARLQE 5445

Query: 233  NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               ++   L+ +    DE   E A   +E  R+ +Q +     E + L   E
Sbjct: 5446 KKAKRLAELKKVKAKDDEVQDELARLEQEAEREQKQVEADIEQEAAILEQAE 5497



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 63/198 (31%), Gaps = 17/198 (8%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-YDVLEKAFESREEQLLDFLGKYHSTC 149
                L + +    + LR   D E   L     K  DV  +A E+R ++    L +     
Sbjct: 6206 RLKRLQEERSKFEEQLRQRHDAEMQRLQAEEQKVLDVEREAQEARLKEKQAELERQREEE 6265

Query: 150  SKVFNYGISSVYRSLKM------KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM- 202
             +        +  S K       KL +   +   + + ++  S L   L++ ++  T   
Sbjct: 6266 KRKMEERSDQLNASQKEALLEQFKLDQAAELGALKAEEQSSKSKLEQKLAARRQKKTEEM 6325

Query: 203  -----KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                 + L EK       L + ER            +    + +  +    D+A ++ A 
Sbjct: 6326 RKREERQLKEKETRDAQRLQEIERQTQLEDAAEVGALSASGS-VSALKVDIDQAAIQLAR 6384

Query: 258  YL---KEISRDLEQNQRT 272
                  E    L++    
Sbjct: 6385 KRGGPNEAKERLKETLAA 6402



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/202 (7%), Positives = 53/202 (26%), Gaps = 30/202 (14%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRC----HIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            L         + ++    +++  +      +  E+S  +                     
Sbjct: 6180 LQEINATRHEEELENFHAAMEREKEERLKRLQEERSKFEE-------------------- 6219

Query: 140  DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                ++ +   ++       +    + +  R++     + +LE +    +  +      L
Sbjct: 6220 QLRQRHDAEMQRLQAEEQKVLDVEREAQEARLKE---KQAELERQREEEKRKMEERSDQL 6276

Query: 200  TMMKN--LFEK-NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
               +   L E+       +L   +     S  +L + +  ++          +E  L+  
Sbjct: 6277 NASQKEALLEQFKLDQAAELGALKAEEQSSKSKLEQKLAARRQKKTEEMRKREERQLKEK 6336

Query: 257  NYLKEISRDLEQNQRTFADEMS 278
                       + Q    D   
Sbjct: 6337 ETRDAQRLQEIERQTQLEDAAE 6358



 Score = 36.9 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 50/168 (29%), Gaps = 13/168 (7%)

Query: 135  EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            EE++   L + ++  S+      + +       +   RS          + + +   ++ 
Sbjct: 5146 EEEIAKDLAEVNAHDSQEAAQEDAILQAEGVAAIEEERS---------TQIAAVTDGIAP 5196

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANL 253
             ++   + +      A  + +L Q  R    +    LR+    ++  LR      +E   
Sbjct: 5197 KKEAARIRERHIRDAAALEKELKQHCRDQRAALASRLRKRKAAKEESLRRAGAGEEETAA 5256

Query: 254  EFANYLKEISR---DLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                   E  R    LEQ      D  +                P +G
Sbjct: 5257 ALQTLEFEAERDVVQLEQALSGLKDTEATSQKQAAALASGEDEHPQSG 5304


>gi|262376878|ref|ZP_06070105.1| RND efflux transporter [Acinetobacter lwoffii SH145]
 gi|262308223|gb|EEY89359.1| RND efflux transporter [Acinetobacter lwoffii SH145]
          Length = 156

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 58/162 (35%), Gaps = 14/162 (8%)

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           ++Q+        ++L      +E   I +P +G +      +      Q   L+ ++P S
Sbjct: 1   MQQSLAQIKSANAQLNQANTNQEYGLITAPTSGKLGQINIRT-GQLVTQGTQLVYLIPKS 59

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNL 381
              ++ A     QI  +K G  A          +   F  +++ I P    +      + 
Sbjct: 60  --MWVIANFKETQIDKMKIGQKAWFTVDALGKQK---FTGVVKSISPATGSEFSVIKTDN 114

Query: 382 QTQEYYEVILKIT---DLAFSDNNI-ELRNGFPAEVLFTAKN 419
            T  + +V+ +I+   D+  + + + EL  G          +
Sbjct: 115 ATGNFTKVVQRISVRIDIDGNQSRLNELIPGMSVVATVDTSS 156


>gi|239833675|ref|ZP_04682003.1| polysaccharide export protein [Ochrobactrum intermedium LMG 3301]
 gi|239821738|gb|EEQ93307.1| polysaccharide export protein [Ochrobactrum intermedium LMG 3301]
          Length = 415

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 84/215 (39%), Gaps = 14/215 (6%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             G  L+T +       + +  ++I+  R   +   +  +++  +     K   +  +Q+
Sbjct: 152 TAGMQLITVQQEYVDLQMQITAMTIRRARFEAELNGTEFNYVLPEQPAASKETAALTQQM 211

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           LD           VFN   +++    +    +  S       L+    L    +   Q++
Sbjct: 212 LDGEKT-------VFNVRRNNLAAERQALEAQAASYGDEIETLQQSIKLHDTEIGLLQEN 264

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVY---KSTLELRENIHEQKN----MLRHINELYDEA 251
           +   K+L ++   ++++L   ER +    ++ LEL   +   +     M + I  L +  
Sbjct: 265 VDSSKSLVDRGLAAKSNLRDMERDLSATRRAALELASFLARARQNQLAMQQRIANLDEIR 324

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             E A  L++I  ++ + +R    ++  +  + K+
Sbjct: 325 KSEAATALQDIDLNIARMERRSNAQLQTMAEIAKS 359


>gi|297565250|ref|YP_003684222.1| RND family efflux transporter MFP subunit [Meiothermus silvanus DSM
           9946]
 gi|296849699|gb|ADH62714.1| efflux transporter, RND family, MFP subunit [Meiothermus silvanus
           DSM 9946]
          Length = 403

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 99/308 (32%), Gaps = 42/308 (13%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++ E   L+F            E +  +    L +   +  +       +   +L+ +
Sbjct: 50  ALVEAETYTLNFNRAGRVARVWVREGQSVEAGQLLAELELSREREDLAAAQAQLSALQAR 109

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           L        +R D E     L+  L+  Q+ L + + L    A SQ +L+   R V +  
Sbjct: 110 L------QASRFDAEVTRRNLQRQLAQAQEQLGLTRRLLAIGAASQAELDNLGRQVVQLE 163

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L     + K   R                           Q     + +++  L++T 
Sbjct: 164 GQLESAAVQAKASQR-------------------------DIQAQLEAQQAQIQSLQRTI 198

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
               + +P+AG +           A  +   ++IV  +    +RA++   Q   VK G  
Sbjct: 199 TDAQLRAPLAGIVTEVGI-KVGESASTAAGGIRIV-RAGSVRVRARLPEAQALEVKPGMP 256

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           A +        R     A +E++  +   +           V L+ T+ A       ++ 
Sbjct: 257 AHIELDALPGQR---LNAKVERLSAVA--EVQGQGGSAVLPVFLRFTEAAAR----SVKP 307

Query: 408 GFPAEVLF 415
           GF      
Sbjct: 308 GFTGTARV 315



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/189 (11%), Positives = 52/189 (27%), Gaps = 5/189 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V  G  +  G  L   E     + +   +  +  L+  +   +   +      
Sbjct: 65  GRVARVWVREGQSVEAGQLLAELELSREREDLAAAQAQLSALQARLQASRFDAEVTRRN- 123

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L++     +EQL   L +            + ++ R +     ++ S  +     +  
Sbjct: 124 --LQRQLAQAQEQL--GLTRRLLAIGAASQAELDNLGRQVVQLEGQLESAAVQAKASQRD 179

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                    +  + L       +  A     + +    V +S       I   +     +
Sbjct: 180 IQAQLEAQQAQIQSLQRTITDAQLRAPLAGIVTEVGIKVGESASTAAGGIRIVRAGSVRV 239

Query: 245 NELYDEANL 253
                EA  
Sbjct: 240 RARLPEAQA 248


>gi|110597481|ref|ZP_01385768.1| putative ABC transport system, lipoprotein [Chlorobium ferrooxidans
           DSM 13031]
 gi|110341025|gb|EAT59496.1| putative ABC transport system, lipoprotein [Chlorobium ferrooxidans
           DSM 13031]
          Length = 302

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 82/259 (31%), Gaps = 32/259 (12%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           + ++ S         ++   +  L  K S+L+A  S+  +D    + L  + AV    L 
Sbjct: 74  TQLHYSKMQLKAEREALEAKQPGLGAKISVLQAERSNLMRDRARYRRLLSEGAVPSRQLE 133

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E  +     ++     E   +   I                                 
Sbjct: 134 EFENRITVLDRQIGSLETEYPGLSGDIRA-----------------------------RS 164

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++L  ++    +  + +P+ G ++  +       A   + L +I    +  Y+R  ++  
Sbjct: 165 ARLAQIDDQIIKSVVKNPVTGVVLA-RYAEPGELASSGKALYRIA-DLERIYLRVYLSGA 222

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           Q+  VK G    V     A          I  I          +QT+E    ++    + 
Sbjct: 223 QLSGVKIGQQVEVEVDG-AQGAGTVLHGTISWISAKAEFTPKIIQTKEERVSMVYAVKVL 281

Query: 398 FSDNNIELRNGFPAEVLFT 416
             + +  LR G P EV   
Sbjct: 282 VPNRDGLLRIGMPGEVRLQ 300


>gi|190892327|ref|YP_001978869.1| efflux transporter protein [Rhizobium etli CIAT 652]
 gi|190697606|gb|ACE91691.1| putative efflux transporter protein [Rhizobium etli CIAT 652]
          Length = 430

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 55/160 (34%), Gaps = 13/160 (8%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+ SG ++  D  V        I+   +VE G ++  G  L+  +D      +   ++S 
Sbjct: 153 VTGSGYVVAPDTAVVFSKYEGRIVA-VEVEEGDKVAVGQVLVRLDDAGARFALRGAEISW 211

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +     +     AL    +    +E+            L    +  ++      ++   +
Sbjct: 212 RAAELVLAARNIALAQARSSLTRIER------------LAGRDAMSAQALEEAKTAFDTA 259

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                   + +   RLD++     + AL+ +     T+ +
Sbjct: 260 ENGAEQARQDLEKARLDIDRAREQVEALVVTAPISGTVTR 299



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 64/216 (29%), Gaps = 23/216 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKN--MLRHINELYDEANLEFANYLKEISRDLEQN 269
           ++      E ++    + L +          L   + +  +A  E            EQ 
Sbjct: 207 AEISWRAAELVLAARNIALAQARSSLTRIERLAGRDAMSAQALEEAKTAFDTAENGAEQA 266

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY------AQQSQPLMKIVP 323
           ++        +    +  E   + +PI+GT+    +             ++ + L+ I  
Sbjct: 267 RQDLEKARLDIDRAREQVEALVVTAPISGTVTRLDAQVGDTVLSREDSVREDESLLAIA- 325

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            +    I A V    I  ++ G         + D     F   + KI P+IS++      
Sbjct: 326 DTASLVIDADVAETNIALMRPGLAGEAVLDGFPDQ---PFAVEVAKIAPVISREKGTATL 382

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                       L+F+     +R    A +      
Sbjct: 383 -----------RLSFTSPPSGIRPAMAARIRLVVGE 407


>gi|39998488|ref|NP_954439.1| RND family efflux transporter MFP subunit [Geobacter sulfurreducens
           PCA]
 gi|39985435|gb|AAR36789.1| efflux transporter, RND family, MFP subunit [Geobacter
           sulfurreducens PCA]
          Length = 582

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 65/222 (29%), Gaps = 32/222 (14%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++ ++      V      L   + +              A  E+    + +   +   +
Sbjct: 295 VAKGEVIA----VIDPPASLGGGMTQLAADHAQAMSRLTLAQAEYDRAKRLVEGKIAARK 350

Query: 271 RTF---------ADEMSKLTILEKTRE-----QKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           R               + L    K+ +     + T+ +P++GT+V   + +  +     Q
Sbjct: 351 RLEEAEASLEAARAVATPLETAMKSVQGGSGGRITVRAPVSGTVVEVPAVN-GSGVAPGQ 409

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L++IV  +   ++R  +    +  V  G  A                        +   
Sbjct: 410 TLVRIV-DTGRLWLRVNLPATDLGKV--GRPA----AAGTTFTVTGLPGEFHTSGLVSDG 462

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
              + QT+    V       A  + +  L+ G  A V     
Sbjct: 463 TVVDPQTRTLPLVF------AVENRSGNLKAGMFARVTIRTG 498


>gi|89894073|ref|YP_517560.1| hypothetical protein DSY1327 [Desulfitobacterium hafniense Y51]
 gi|89333521|dbj|BAE83116.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 375

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 92/281 (32%), Gaps = 45/281 (16%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            + +      +    G   +    +     +++        + +S+      +   KD  
Sbjct: 67  LIKRIAVETGQQVQKGDLLLSMDREQLEISLKNAAELLNQAKAQSAAGEEAYTMALKDYD 126

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             ++L E  A S+ +L Q+E  +  +      N    +                      
Sbjct: 127 NTRSLAEAGAASEWELTQKEAALKSAEAVRSGNQAALEQA-------------------- 166

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
               +L     + A              ++ +L+P+ GTI+  +    + +      +  
Sbjct: 167 ----ELSVANSSLA------------LSKQQVLAPLKGTILQKRV-EVNAFGVPG-TVAF 208

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           ++  ++   I+AK+  +    ++ G  AT+         ++     + KI P    + ++
Sbjct: 209 VIGDTENLEIQAKILAEDAASIQVGNKATLTV---RTKEQQTLAGTVVKIAPTAEDEVSS 265

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           L  ++  +V + I  L   D  + L  G   +V    +  +
Sbjct: 266 LGVKQK-KVTVTIKPL---DAQVALLPGSEVDVRVITETKS 302



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 96/302 (31%), Gaps = 39/302 (12%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFS-GIIKKFQVENGSQILQGTPLLTFEDIETT 93
           + L  I+  V  +GE+   D+          G+IK+  VE G Q+ +G  LL+ +  +  
Sbjct: 37  AKLGDIQKYVEETGEVKCSDSATV--YLEGSGLIKRIAVETGQQVQKGDLLLSMDREQLE 94

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +      +   +      + A       YD      E+      +   K         
Sbjct: 95  ISLKNAAELLNQAKAQSAAGEEAYTMALKDYDNTRSLAEAGAASEWELTQKE-------- 146

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA--- 210
               +++  +  ++     ++    L + N S  L           T+++   E NA   
Sbjct: 147 ----AALKSAEAVRSGNQAALEQAELSVANSSLALSKQQVLAPLKGTILQKRVEVNAFGV 202

Query: 211 -------VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                  +   +  + +  +      L E+    +   +    +  +     A  + +I+
Sbjct: 203 PGTVAFVIGDTENLEIQAKI------LAEDAASIQVGNKATLTVRTKEQQTLAGTVVKIA 256

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
              E    +   +  K+T+  K  + +  L P +   V   + + S           IVP
Sbjct: 257 PTAEDEVSSLGVKQKKVTVTIKPLDAQVALLPGSEVDVRVITETKSGVV--------IVP 308

Query: 324 HS 325
             
Sbjct: 309 AG 310


>gi|325290107|ref|YP_004266288.1| RND family efflux transporter MFP subunit [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965508|gb|ADY56287.1| RND family efflux transporter MFP subunit [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 307

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 16/149 (10%)

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            + +   T    + K  +L K+     I + I+G IV      +         LM++V  
Sbjct: 74  QISEISVTKGQSVEKDALLLKSTAGDQIKAKISGEIVSIDVQENEQVM-AGTKLMELV-D 131

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                +  KV    I  +K G  ATV+         K+ +  I+ I      +       
Sbjct: 132 YHHLEVAVKVDEYDIAALKTGQQATVKIGAGN----KELQGKIDSISR----EGQIADGV 183

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y+   + + + +       +R G  AEV
Sbjct: 184 TYFMATIVLPEDS------SIRIGMTAEV 206


>gi|315285345|gb|EFU44790.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 110-3]
 gi|323954864|gb|EGB50644.1| HlyD family protein secretion protein [Escherichia coli H263]
          Length = 378

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNADIDALPDGIYAQV 347


>gi|224823967|ref|ZP_03697075.1| efflux transporter, RND family, MFP subunit [Lutiella nitroferrum
           2002]
 gi|224603386|gb|EEG09561.1| efflux transporter, RND family, MFP subunit [Lutiella nitroferrum
           2002]
          Length = 303

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 75/230 (32%), Gaps = 25/230 (10%)

Query: 204 NLFEKNAVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            L ++  V    D  + E  + ++   +           R        A+L     L+E 
Sbjct: 67  QLVKRGQVLFVIDRARYELALKQAMAAVAAQRATLAQARRETVRSRALADLVAKENLEES 126

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              ++Q + T A   + L +     E+  + SP+ G  + +++    +Y    +P++ IV
Sbjct: 127 EAKVQQGEATLAAAEAALDVARINLERTEVKSPVDGY-LNDRTPRLGDYVTTGRPVLSIV 185

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
             +   ++       ++ +V  G    ++            +  ++ I   I  +D +  
Sbjct: 186 -DAHSFHVDGYFEETKLNNVHIGQPVDIQI----MGDAHTLRGHVQSIAAGIEDRDRSNG 240

Query: 383 T---------------QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                            +   V + + ++     +  L  G  A V    
Sbjct: 241 ATLLPNVNPTFNWVRLAQRVPVRIALDEV---PGDFRLIAGRTATVSVQT 287



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 56/167 (33%), Gaps = 18/167 (10%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPI----EISVSSSGEILNEDNVVEIKSPFSGI 66
           RN  + +  +T++ I  ++G   W          +  + +        +VV+I    SG+
Sbjct: 6   RNAGSVILTLTVVVIAAVVGWHLWDYYSNAPWTRDGHIRA--------DVVQIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V +   + +G  L   +       +     ++   R  +   +          D+
Sbjct: 58  ITTVSVRDNQLVKRGQVLFVIDRARYELALKQAMAAVAAQRATLAQARRETVRSRALADL 117

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           + K      E L +   K     + +     +     + ++ T ++S
Sbjct: 118 VAK------ENLEESEAKVQQGEATLAAAEAALDVARINLERTEVKS 158


>gi|163854150|ref|YP_001642193.1| secretion protein HlyD family protein [Methylobacterium extorquens
           PA1]
 gi|163665755|gb|ABY33122.1| secretion protein HlyD family protein [Methylobacterium extorquens
           PA1]
          Length = 359

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 26/202 (12%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR----------TFADEMSKLTILE 284
            E     R  +    EA       L  +S  +E+ Q+                S+L+  +
Sbjct: 130 AEAAIKNREADLSVKEAQSARRAALSTVSTSVEEKQQFAGTAKIAEAALETARSQLSQAK 189

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           K  E+  + S + G +         +YAQ      +++  +   ++       ++ H+  
Sbjct: 190 KNLERTQVRSTVNGRVTNLLLR-VGDYAQTGTANARVI-DTDSFWVDGYFEETKMAHIHV 247

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEYYE---------VILKI 393
           G  A +    Y    +   +++   I      +           Y          V ++I
Sbjct: 248 GAPAEMALMGYDASLKGTVESLTLGISTANAATSTQGLPNVDPVYTWVRLAQRVPVRIRI 307

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
             +      + L  G  A V+ 
Sbjct: 308 DHV---PPEVTLVAGMTATVVV 326



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 5/124 (4%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +     VV I    +G I + +V +  ++ +G  L   +  +  + +   + +IKN 
Sbjct: 80  DGRVRV--QVVNIAPQVAGTIVELRVTDNQEVKKGDVLYVIDPFDYQEAVVSAEAAIKNR 137

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              +  +++          V   +    E+Q      K      +     +S   ++L+ 
Sbjct: 138 EADLSVKEAQSARRAALSTV---STSVEEKQQFAGTAKIAEAALETARSQLSQAKKNLER 194

Query: 167 KLTR 170
              R
Sbjct: 195 TQVR 198


>gi|153009153|ref|YP_001370368.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151561041|gb|ABS14539.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 355

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 47/410 (11%), Positives = 104/410 (25%), Gaps = 80/410 (19%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSIL---LPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +         + ++   G   W  L      +     +G I   +  +  KSP  G I++
Sbjct: 4   NRKQWILAGAIIVLAAGGYYAWKALNGDGLPDGIAKGNGRIEAVEIDISTKSP--GRIRE 61

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
              + G  +     L   +  +        +  ++     I+T +S +     ++   E 
Sbjct: 62  ILADEGDFVQADDILARMDTDQLESQRKQAEAQLRRAEIGIETARSLVTQREAEHTAAEA 121

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               RE QL     +               + +S  +    +          E      +
Sbjct: 122 TVAQREAQLDAAQRRL---------ARSQQLTQSRTVSQQVLDDDRATAQGAEAAVGAAK 172

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L++ +  +   K                        ++   ++   K  +  I    +
Sbjct: 173 AQLAATEAAIGAAK---------------------AQVVDAEASVEAAKAAIASIEADIN 211

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +A                                       T+ +P  G + Y +     
Sbjct: 212 DA---------------------------------------TLRAPKPGRVQY-RVAQPG 231

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK---FKAI 366
                   ++ +V      Y+   +   Q   V  G  A +               F A 
Sbjct: 232 EVLSAGGRVLNLV-DVSDVYMTFFLPTGQAGRVAMGADARIVLDAAPQYVIPAKISFVAD 290

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           + +  P   + +   Q   +  V  KI          +++ G P      
Sbjct: 291 VAQFTPKTVETEEERQKLMF-RVKAKIPQELLQKYIQQVKTGLPGMAYVK 339


>gi|114567962|ref|YP_755116.1| hypothetical protein Swol_2456 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114338897|gb|ABI69745.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 431

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 77/235 (32%), Gaps = 11/235 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V S+G +       +  +P    + + +V+ G ++ +G  L   + +E        
Sbjct: 66  IERTVVSNGHLEAVA-RQDFFTPVDSTLMELKVKAGDRVKKGEVLGRLDSLELARKYKNS 124

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              +      +   ++  D L  K   ++    +   + ++ L  Y +    +     + 
Sbjct: 125 LALLAAREAELAKAEAVNDELKLKEAEVQYQKANNHLERVEHL--YDAGAVNIEEREAAQ 182

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V  +    L     I L +     + + L+A +   Q+++   K         + DL   
Sbjct: 183 VEEAKAQALYNEAKIKLEQKAASREKASLKAQVELAQQEVEQAKE--------RLDLATF 234

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                   + +      +      + EL  E  LE    + EI     +  +   
Sbjct: 235 VAAFDGVVIAVNAKEGNRVLEGSSVMELGSEDMLEVTATVNEIDAGNLEAGQEVR 289


>gi|313892336|ref|ZP_07825928.1| efflux transporter, RND family, MFP subunit [Dialister
           microaerophilus UPII 345-E]
 gi|313119195|gb|EFR42395.1| efflux transporter, RND family, MFP subunit [Dialister
           microaerophilus UPII 345-E]
          Length = 353

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 68/223 (30%), Gaps = 29/223 (13%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--- 260
            + EK   S   +   + +    + +  E  +  +  L      Y+ A    A + K   
Sbjct: 70  RIVEKYVSSGQHVTAGQPLFRIDSKDAEETANAAEGKLAAAKAQYNLAKTTLARFQKLHD 129

Query: 261 ----------EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                     +     E  Q       + +   E       + +  +G I  N  F    
Sbjct: 130 IDAISDMAMDQTRSQFELAQAQLDQAQAMVGRAENNLNLTVLTADRSGVI-GNTLFEVGQ 188

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
            A    P+  IV       +   +T KQ      G   TV F    D+       +I++I
Sbjct: 189 VAGPGMPVAIIV-DDSTKEVNISLTEKQYSKYSVGMPCTVTFWALPDV---VVHGVIKEI 244

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
               +           Y+  + +TD   +  N+ +  G  A+V
Sbjct: 245 AGTPNPSTGT------YDAKISLTD---APENVVI--GMTAQV 276



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 30/81 (37%)

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           P  G I +  V +G  +  G PL   +  +  +  +  +  +   +   +  K+ L    
Sbjct: 66  PVGGRIVEKYVSSGQHVTAGQPLFRIDSKDAEETANAAEGKLAAAKAQYNLAKTTLARFQ 125

Query: 122 NKYDVLEKAFESREEQLLDFL 142
             +D+   +  + ++    F 
Sbjct: 126 KLHDIDAISDMAMDQTRSQFE 146


>gi|300313717|ref|YP_003777809.1| cobalt-zinc-cadmium resistance cation efflux system transmembrane
           protein [Herbaspirillum seropedicae SmR1]
 gi|300076502|gb|ADJ65901.1| cobalt-zinc-cadmium resistance cation efflux system transmembrane
           protein [Herbaspirillum seropedicae SmR1]
          Length = 396

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 92/309 (29%), Gaps = 27/309 (8%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             E    +  + +    E       EQ+     +  +    + N  +  +   ++    R
Sbjct: 38  AAEHGEGEHHDAEPSSEEGKIALNPEQIATAGIEVKTAGPMILNSSV-QLPGEIRFNEDR 96

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
              +      +    S          + L ++      +AVS+      E +  +  L L
Sbjct: 97  TAHVVPQVAGIVESVSAKLGQKVRKGQVLAVI----NSSAVSEQR---SEMLNAEQRLAL 149

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
               ++++  L       ++  L+    L+E    +   Q+      +  T       + 
Sbjct: 150 ARTAYQREKQLWEQKISAEQDYLQAQAALREAEVAVRNAQQKLRAIGA--TASSGGLNRY 207

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +P  G +V           ++      I       +    V+PK +Q V+ G   TV
Sbjct: 208 EIRAPFDGVVVEKHL-GLGEAVKEDANAFLIS-DLSSVWAEIIVSPKDMQFVRTGEKVTV 265

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           R   +           I  +  +I +Q    +      VIL   D ++       R G  
Sbjct: 266 RATAFDAS----ASGKISYVGSLIGEQSRTAKAH----VILPNPDDSW-------RPGLF 310

Query: 411 AEVLFTAKN 419
             V   +  
Sbjct: 311 VNVEVVSDE 319



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 40/111 (36%), Gaps = 5/111 (4%)

Query: 40  IEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +  SV   GEI   ++    +    +GI++    + G ++ +G  L        ++    
Sbjct: 80  LNSSVQLPGEIRFNEDRTAHVVPQVAGIVESVSAKLGQKVRKGQVLAVINSSAVSEQRSE 139

Query: 99  ---KKVSIKNLRCHIDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGKY 145
               +  +   R     EK   +  ++ + D L+     RE ++     + 
Sbjct: 140 MLNAEQRLALARTAYQREKQLWEQKISAEQDYLQAQAALREAEVAVRNAQQ 190


>gi|148260883|ref|YP_001235010.1| secretion protein HlyD family protein [Acidiphilium cryptum JF-5]
 gi|326404280|ref|YP_004284362.1| HlyD family secretion protein [Acidiphilium multivorum AIU301]
 gi|146402564|gb|ABQ31091.1| secretion protein HlyD family protein [Acidiphilium cryptum JF-5]
 gi|325051142|dbj|BAJ81480.1| HlyD family secretion protein [Acidiphilium multivorum AIU301]
          Length = 368

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/322 (11%), Positives = 92/322 (28%), Gaps = 28/322 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++A   L+     L +  +  + Q +       +     F   I+    +L      + +
Sbjct: 67  RAARVALSTDVSGLVETVDVHDNQQVKKGQVLFTLDPSRFRVAIAQAKANLAEVGQEIEA 126

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                     K    ++++ + + +      L     V++   +  +  +      L   
Sbjct: 127 TRAGYRAEIAKIRTQQSVVDNDRLNFARYAALVHTGGVTRTAYDDAKYKLQGDEATLASM 186

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +    L  ++        +   Y    +                    E       + 
Sbjct: 187 TAQAGVDLAKLSGNPKIKIGDTPQYKAAKAAL---------------ATAELNYRHSIVR 231

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P AG +          +         +V  S   +IR++     +  VK G    V   
Sbjct: 232 APFAGVVTETDKLEPGMFLPAGTSAFALVSTSD-VWIRSQPKETSLTWVKPGDKVKVHVD 290

Query: 354 HYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            Y       ++ ++  I P          ++  +    +    + L++  +     ++ L
Sbjct: 291 AYPGQT---WQGVVASISPASGSSFSILPAENSSGNWVKVVQRIPLRVN-ITGGPKDLVL 346

Query: 406 RNGFPAEVLFTAKNTTLAQEII 427
           RNG  AE+  T  +     ++ 
Sbjct: 347 RNGMTAEITITTGHQNRLSDLF 368



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 49/149 (32%), Gaps = 6/149 (4%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLIT--WSILLPIEISVSSSGEILNEDNVVE 58
           M     +   R+       + +  ++ I+G I   W     +     +  +       V 
Sbjct: 17  MRQEATRGRSRSGRMLRPLLMIGGVLVILGAILVYWL----LSGGTVNVTDTYVRAARVA 72

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SG+++   V +  Q+ +G  L T +       I   K ++  +   I+  ++   
Sbjct: 73  LSTDVSGLVETVDVHDNQQVKKGQVLFTLDPSRFRVAIAQAKANLAEVGQEIEATRAGYR 132

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHS 147
               K    +   ++       +    H+
Sbjct: 133 AEIAKIRTQQSVVDNDRLNFARYAALVHT 161


>gi|283835977|ref|ZP_06355718.1| inner membrane protein YibH [Citrobacter youngae ATCC 29220]
 gi|291068156|gb|EFE06265.1| inner membrane protein YibH [Citrobacter youngae ATCC 29220]
          Length = 378

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 99/294 (33%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +GI+ +   +N   I +G  L   + +     +D  +  +     +ID  K+ L 
Sbjct: 66  VTPQVTGIVSEVTDKNNQLIKKGEVLFKLDPVRYQARVDRLQADLVTATHNIDNLKAQLS 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +      R+    D+      + +KV  +  S +  + +  L +   +  + 
Sbjct: 126 EAVANTTRVSAE---RDRLYKDYQRYLKGSQAKVNPFSESDIDNARQNYLAQDALVKGSV 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            +     S L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 183 AEQTQIQSQLDSMVNGEQSQVASLRAQLAEAKYNLEQTIVRAPSNGYATQILIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L     + +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLEPGDEAEVVFNALPGQVFSGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   +  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGALQS----LTVVPGTDGVMATIELDPNADVDALPDGIYAQV 347


>gi|167588594|ref|ZP_02380982.1| multidrug resistance protein MdtN [Burkholderia ubonensis Bu]
          Length = 349

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 69/198 (34%), Gaps = 7/198 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           + P++  R   L+I+ + G+   +       +  S+ +   + ++V + SP  G I K  
Sbjct: 7   SQPSTKGRAIALAIVAL-GIAALAFAYHRTTAYPSTDDASIDADIVHVASPVGGRIVKLA 65

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V    ++ +G  L   + +     +   +  ++  R  +DT +  L    +   V  +  
Sbjct: 66  VHENQRVAKGDLLYEIDPVPYRLTVAQAQADVELARASLDTRRKTLIGERSNASVAAEQV 125

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVY------RSLKMKLTRMRSIYLNRLDLENKS 185
           +   +         +          +S+        R     ++  ++    R   +   
Sbjct: 126 KRATQNHDLATRDVNRLAPLAAQGYVSAQQFDQAKVRQRDAAVSLAQAQEQQRASAQTIG 185

Query: 186 SLLRALLSSHQKDLTMMK 203
               A+ + H ++  + +
Sbjct: 186 DDADAIATLHAREAALAR 203


>gi|77163736|ref|YP_342261.1| secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
 gi|254435454|ref|ZP_05048961.1| auxiliary transport protein, MFP family, putative [Nitrosococcus
           oceani AFC27]
 gi|76882050|gb|ABA56731.1| Secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
 gi|207088565|gb|EDZ65837.1| auxiliary transport protein, MFP family, putative [Nitrosococcus
           oceani AFC27]
          Length = 365

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 23/198 (11%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L Q E  V K   EL   + EQK     + EL  + N              +++Q    +
Sbjct: 96  LLQLEDSVDK--AELEGLLAEQK-----LAELQFQRNARLLKKKMVSRSIYDESQAQLEN 148

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             + +       ++K I +P +G  +  +      Y     P++ ++      Y+   + 
Sbjct: 149 AQAMVAAKRALIQKKQIRAPFSGL-LGIRQVDLGEYLAPGSPIV-LLQALDPIYVDYSLP 206

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            +    + +G T  +    Y       FK  I  I+P I     N        V ++ T 
Sbjct: 207 ERYFSLLAQGQTVLITVQAYPAQH---FKGRITAINPGIDPNSRN--------VQVRAT- 254

Query: 396 LAFSDNNIELRNGFPAEV 413
             F +  + LR G  AEV
Sbjct: 255 --FDNPELHLRPGMFAEV 270


>gi|16759739|ref|NP_455356.1| hypothetical protein STY0853 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142488|ref|NP_805830.1| hypothetical protein t2070 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213163845|ref|ZP_03349555.1| hypothetical protein Salmoneentericaenterica_29101 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213422141|ref|ZP_03355207.1| hypothetical protein Salmonentericaenterica_32148 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
 gi|213424787|ref|ZP_03357537.1| hypothetical protein SentesTyphi_03201 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213647602|ref|ZP_03377655.1| hypothetical protein SentesTy_10157 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213854654|ref|ZP_03382894.1| hypothetical protein SentesT_11374 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289809835|ref|ZP_06540464.1| hypothetical protein Salmonellaentericaenterica_37727 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
 gi|289825292|ref|ZP_06544571.1| hypothetical protein Salmonellentericaenterica_07901 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|20455398|sp|Q8Z879|YBHG_SALTI RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|25512911|pir||AG0599 HlyD-family secretion protein [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16502032|emb|CAD05265.1| HlyD-family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138119|gb|AAO69690.1| HlyD-family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 331

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  + + Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLSQYRTGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   +   +  T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 185 ASLEQAKAQLAQAQLDLQDTTLIAPANGTLLT-RAVEPGSMLNAGSTVLTLS-LTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLSQTQPGRDILL---YTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIIVTDADDA-----LRQGMPVTV 322



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 94/339 (27%), Gaps = 53/339 (15%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
            TW      +  ++  G +  +   V I     G +    V+ G  I  G  L   +   
Sbjct: 21  GTWWYQSRQDDGLTLYGNV--DIRTVNISFRVGGRLASLNVDEGDTIKAGQVLGELDHAP 78

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             + +   K  +   +   D   +             +  E  +        +     ++
Sbjct: 79  YENALMQAKAGVSVAQAQYDLMLAGY-----------RDEEIAQAAAAVRQAQAAYDYAQ 127

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            F      +++S  +    + +   +R   +       A L S Q  L+  +    +  +
Sbjct: 128 NFYNRQQGLWKSRTISANDLENARSSRDQAQ-------ATLKSAQDKLSQYRTGNREQDI 180

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q           K++LE  +    Q  +      L   AN        E    L     
Sbjct: 181 AQ----------AKASLEQAKAQLAQAQLDLQDTTLIAPANGTLLTRAVEPGSMLNAGST 230

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS----------NYAQQSQPLMKI 321
                +++   +    +++ +     G       ++             +   +    + 
Sbjct: 231 VLTLSLTRPVWVRAYVDERNLSQTQPGR--DILLYTDGRPDKPYHGKIGFVSPT---AEF 285

Query: 322 VPHS-------KLTYIRAKVTPKQIQ-HVKKGYTATVRF 352
            P +            R ++        +++G   TV+F
Sbjct: 286 TPKTVETPDLRTDLVYRLRIIVTDADDALRQGMPVTVKF 324


>gi|27377560|ref|NP_769089.1| hypothetical protein bll2449 [Bradyrhizobium japonicum USDA 110]
 gi|27350704|dbj|BAC47714.1| bll2449 [Bradyrhizobium japonicum USDA 110]
          Length = 525

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/337 (13%), Positives = 96/337 (28%), Gaps = 32/337 (9%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
               + T     +        +  +D     L  +N++ D        R++  L+     
Sbjct: 175 RLVTLRTPIGGRVVAAQPITDQAKLDAGTVLLRVVNSRGDRTRLDDLRRQKSRLEIERPS 234

Query: 146 HSTCSKVFNYGISSVYRSLKM-KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            +            + R     +  R+  +     +++       A        +    +
Sbjct: 235 VAAKLAAAQAAQKDLARQATQFREGRVLQLEARIAEIQTSIEAAAARRDEASAAVERASS 294

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--------------- 249
           L +   VS  +L +  R +  +                 +    +               
Sbjct: 295 LAKSGNVSTVELARLTRELSVAQQTELGARKRLDAAKVELTAAQNGSFLGDSYNDRPSSV 354

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT---REQKTILSPIAGTIVYNQSF 306
           +   E      ++  DL +     A   +++ I E       +  I +P+AG +    + 
Sbjct: 355 QREEEMRQRAGDLEADLARTDTEIAWLANEIIIEEARFADLSEANITTPVAGRVWEMMT- 413

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-FKA 365
           S     Q  QPL+KI+       I A VT      ++ G  A      +      +    
Sbjct: 414 SPGEDVQAGQPLLKIL-DCSGAVITANVTENVYNRLQLGDRA-----SFEPNDGGEPISG 467

Query: 366 IIEKID-----PIISQQDNNLQTQEYYEVILKITDLA 397
            +  +      P     + +  ++E Y V +   D A
Sbjct: 468 TVVNLTGAAGAPANLAINPDALSKEPYRVTVAPGDAA 504


>gi|16764181|ref|NP_459796.1| hypothetical protein STM0818 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|62179385|ref|YP_215802.1| hypothetical protein SC0815 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|167550505|ref|ZP_02344262.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|167992050|ref|ZP_02573148.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|197251852|ref|YP_002145773.1| hypothetical protein SeAg_B0853 [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|198244763|ref|YP_002214781.1| hypothetical protein SeD_A0913 [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|207856255|ref|YP_002242906.1| hypothetical protein SEN0764 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224582631|ref|YP_002636429.1| hypothetical protein SPC_0815 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|20455405|sp|Q8ZQP0|YBHG_SALTY RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|75484333|sp|Q57RE0|YBHG_SALCH RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710508|sp|B5F095|YBHG_SALA4 RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710509|sp|B5FP83|YBHG_SALDC RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710510|sp|B5QXS4|YBHG_SALEP RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|254807375|sp|C0PX06|YBHG_SALPC RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|16419324|gb|AAL19755.1| membrane permease predicted cation efflux pump [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|62127018|gb|AAX64721.1| membrane permeases, predicted cation efflux pump [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|197215555|gb|ACH52952.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197939279|gb|ACH76612.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|205324639|gb|EDZ12478.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205329590|gb|EDZ16354.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|206708058|emb|CAR32349.1| HlyD-family secretion protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224467158|gb|ACN44988.1| hypothetical protein SPC_0815 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261246076|emb|CBG23878.1| HlyD-family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992561|gb|ACY87446.1| hypothetical protein STM14_949 [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157403|emb|CBW16892.1| HlyD-family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911842|dbj|BAJ35816.1| hypothetical protein STMDT12_C08730 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321226391|gb|EFX51442.1| putative membrane fusion protein (MFP) component of efflux pump,
           membrane anchor protein YbhG [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|322713856|gb|EFZ05427.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
 gi|323129125|gb|ADX16555.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|326622536|gb|EGE28881.1| Secretion protein HlyD [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
 gi|332987749|gb|AEF06732.1| hypothetical protein STMUK_0823 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 331

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  + + Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLSQYRTGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   +   +  T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 185 ASLEQAKAQLAQAQLDLQDTTLIAPANGTLLT-RAVEPGSMLNAGSTVLTLS-LTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLSQTQPGRDILL---YTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIIVTDADDA-----LRQGMPVTV 322



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 94/339 (27%), Gaps = 53/339 (15%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
            TW      +  ++  G +  +   V I     G +    V+ G  I  G  L   +   
Sbjct: 21  GTWWYQSRQDDGLTLYGNV--DIRTVNISFRVGGRLASLNVDEGDTIKAGQVLGELDHAP 78

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             + +   K  +   +   D   +             +  E  +        +     ++
Sbjct: 79  YENALMQAKAGVSVAQAQYDLMLAGY-----------RDEEIAQAAAAVRQAQAAYDYAQ 127

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            F      +++S  +    + +   +R   +       A L S Q  L+  +    +  +
Sbjct: 128 NFYNRQQGLWKSRTISANDLENARSSRDQAQ-------ATLKSAQDKLSQYRTGNREQDI 180

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q           K++LE  +    Q  +      L   AN        E    L     
Sbjct: 181 AQ----------AKASLEQAKAQLAQAQLDLQDTTLIAPANGTLLTRAVEPGSMLNAGST 230

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS----------NYAQQSQPLMKI 321
                +++   +    +++ +     G       ++             +   +    + 
Sbjct: 231 VLTLSLTRPVWVRAYVDERNLSQTQPGR--DILLYTDGRPDKPYHGKIGFVSPT---AEF 285

Query: 322 VPHS-------KLTYIRAKVTPKQIQ-HVKKGYTATVRF 352
            P +            R ++        +++G   TV+F
Sbjct: 286 TPKTVETPDLRTDLVYRLRIIVTDADDALRQGMPVTVKF 324


>gi|332715574|ref|YP_004443040.1| nolF secretion protein [Agrobacterium sp. H13-3]
 gi|325062259|gb|ADY65949.1| nolF secretion protein [Agrobacterium sp. H13-3]
          Length = 382

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 92/274 (33%), Gaps = 24/274 (8%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
            GI     + ++     R++            + R ++ + +    +  N+ +  AV   
Sbjct: 48  AGIPFELTAAEIARIGTRAMAERLSISGELQPVSRVVIRAREAGKILDMNVRDGQAVRAG 107

Query: 215 DLN-QQERIVYKSTLELRENIHEQKNMLRHIN-------ELYDEANLEFANYLKEISRDL 266
           DL  + E    +STL LR++  +       +        E     N+  A  L +   D+
Sbjct: 108 DLLVRFETEELQSTLLLRQSDRDAAEAELTLAMQALTRTEQLASKNIASAEQLDKAKSDV 167

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                      +++ I         I +P  GTI   Q+  + +       LM +V  + 
Sbjct: 168 VVKTARLQSLSAQVDIARLALRNAEIRAPFEGTITRRQA-EAGSRVSADGELMTLV-DTS 225

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
           +   +  V  + I  V  G TA +       I  +  ++ +E+I P+            +
Sbjct: 226 MLEAKVLVATRDIPRVAVGQTAELDI---DGIGGQPLRSTVERISPVAED------GTRF 276

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             V L+      ++ +  L  G  A      +  
Sbjct: 277 VAVYLR-----LANRDGRLWGGMFASGSILVREK 305



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 74/199 (37%), Gaps = 10/199 (5%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SGE+     V  I++  +G I    V +G  +  G  L+ FE  E    + L++      
Sbjct: 74  SGELQPVSRV-VIRAREAGKILDMNVRDGQAVRAGDLLVRFETEELQSTLLLRQSDRDAA 132

Query: 107 RCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +     AL   + L +K     +  +  +  ++    +  S  ++V    ++     
Sbjct: 133 EAELTLAMQALTRTEQLASKNIASAEQLDKAKSDVVVKTARLQSLSAQVDIARLALRNAE 192

Query: 164 LKM----KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL--FEKNAVSQNDLN 217
           ++      +TR ++   +R+  + +   L        K L   +++        ++ D++
Sbjct: 193 IRAPFEGTITRRQAEAGSRVSADGELMTLVDTSMLEAKVLVATRDIPRVAVGQTAELDID 252

Query: 218 QQERIVYKSTLELRENIHE 236
                  +ST+E    + E
Sbjct: 253 GIGGQPLRSTVERISPVAE 271


>gi|323155460|gb|EFZ41641.1| hlyD family secretion family protein [Escherichia coli EPECa14]
          Length = 342

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 30  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 89

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 90  EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 149

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 150 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYITQVLIRPGTYAA 206

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 207 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 262

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 263 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 311


>gi|253686874|ref|YP_003016064.1| peptidase M50 [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251753452|gb|ACT11528.1| peptidase M50 [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 702

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 57/166 (34%), Gaps = 16/166 (9%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           W   K  HP +  R  LL    +  L+  W   + I   + +         V  + SP  
Sbjct: 403 WSMRKSIHPIAFLRSALLCSALLFILLYPWGGSIHIPAVLEAE-------KVSTLYSPVP 455

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
             + +  V +G ++  G  LL    ++    +D+++  I  L+       +  +      
Sbjct: 456 AQVNQLHVTDGQRVDAGDILLELTSVDLDYRLDIERQRITQLQQQRQRGAARQET----- 510

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                  +  + QL + L +Y    ++     I +    +   L R
Sbjct: 511 ---ASEIQVMDRQLAEALARYRGLAAQRQRLTIRAPQAGVVRDLAR 553



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 78/237 (32%), Gaps = 33/237 (13%)

Query: 211 VSQNDLNQQER-IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           V+Q  +   +R       LEL     + +  +        +   +     +E + +++  
Sbjct: 458 VNQLHVTDGQRVDAGDILLELTSVDLDYRLDIERQRITQLQQQRQRGAARQETASEIQVM 517

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYN-QSFSSSNYAQQSQPLMKIV-PHSKL 327
            R  A+ +++   L   R++ TI +P AG +    +  ++  +     PL+++V P    
Sbjct: 518 DRQLAEALARYRGLAAQRQRLTIRAPQAGVVRDLARDMTAGRWLTADTPLLRVVEPTQGR 577

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID---------------- 371
                 +  + +   ++G      F    D    +    +  I                 
Sbjct: 578 VV--GYIPEESLMRTQEGMQGV--FLA-DDPAFPRLDVTLHDIAPTGSAYLQQEMLASDR 632

Query: 372 --PIISQQDNNLQTQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
             PI  ++D +   Q     Y V   + +  F      LR      V+   +  ++ 
Sbjct: 633 HGPIAVRRDRDHNPQPVQAQYRVHFMVQEEPFLPLQQPLR----GSVILEGEKESIL 685


>gi|153833558|ref|ZP_01986225.1| multidrug resistance protein A [Vibrio harveyi HY01]
 gi|148870085|gb|EDL69032.1| multidrug resistance protein A [Vibrio harveyi HY01]
          Length = 349

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 25/246 (10%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +L++      +  +  +   ++     L+       + +      +   S       + +
Sbjct: 63  ELVEKGQPLFAIDASSYQLKVAQAKAELRQARESDSAKWQQLAAAKQTQSQREFEYHNAK 122

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           + LT  + L  K   ++ +L+        ++  +     E K +   ++     A +E A
Sbjct: 123 QKLTRNQKLRNKGLATEQELDDAITNTQVASSAVEAANAEVKRIEAELSTQDRTAAIELA 182

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                +KL   E       I++   G +   Q  S  +Y  Q  
Sbjct: 183 E--------------------AKLASAELDLSHTQIVAQTEGVVTNLQLQS-GSYITQGT 221

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
             + +V      +I A    K I  +  G    V F        K F   +   +  I  
Sbjct: 222 ASLMLV-DEAHAWISADFNEKGIDKLTNGREVLVSFDALP---GKVFTGEVSSQERAIYD 277

Query: 377 QDNNLQ 382
            +N   
Sbjct: 278 TNNANG 283



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 79/240 (32%), Gaps = 6/240 (2%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            NV  I    SG+I    V NG  + +G PL   +       +   K  ++  R     +
Sbjct: 41  RNVATIAPEVSGVITDVMVNNGELVEKGQPLFAIDASSYQLKVAQAKAELRQARESDSAK 100

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              L          E  + + +++L       +   +       +     +        +
Sbjct: 101 WQQLAAAKQTQSQREFEYHNAKQKLTRNQKLRNKGLATEQELDDAITNTQVASSAVEAAN 160

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRE 232
             + R++ E  +    A +   +  L   + +L     V+Q      E +V    L+   
Sbjct: 161 AEVKRIEAELSTQDRTAAIELAEAKLASAELDLSHTQIVAQT-----EGVVTNLQLQSGS 215

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            I +    L  ++E +   + +F     +   +  +   +F     K+   E + +++ I
Sbjct: 216 YITQGTASLMLVDEAHAWISADFNEKGIDKLTNGREVLVSFDALPGKVFTGEVSSQERAI 275


>gi|332531811|ref|ZP_08407696.1| cobalt/zinc/cadmium efflux RND transporter, membrane fusion
           protein, CzcB family [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038787|gb|EGI75229.1| cobalt/zinc/cadmium efflux RND transporter, membrane fusion
           protein, CzcB family [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 522

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 65/179 (36%), Gaps = 16/179 (8%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L +  E +  A       L   ++   ++       + +L   +K  +  T  +  +G 
Sbjct: 162 QLVNAQEEFLLAVNRNNTVLIRAAKARLESLNVSDGFIERLQKNKKIMQNITFYAKQSGV 221

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +          Y +    +M I       ++ A+V  +Q + V  G   T+       ++
Sbjct: 222 VDELTVR-EGFYVKPGTSMMSIA-QLDEIWVEAEVFERQSEQVNVGLPVTMTL---DYLK 276

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            +K++  ++ I P +  ++  L       V L+     F + +  L+    A+V   A+
Sbjct: 277 GQKWEGKVDYIYPALDAKNRTL------RVRLR-----FENADHRLKPNMFAQVSIHAE 324


>gi|320103697|ref|YP_004179288.1| secretion protein HlyD family protein [Isosphaera pallida ATCC
           43644]
 gi|319750979|gb|ADV62739.1| secretion protein HlyD family protein [Isosphaera pallida ATCC
           43644]
          Length = 749

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 91/284 (32%), Gaps = 19/284 (6%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
              R           +++  +I  I    L+P  ++V   G +L E     + +P  GI+
Sbjct: 367 AQARLLRGRTWAKIGVAVGMVIAAILAMALVPWTLTVQGDGSLLPEIRR-TLHAPLQGIV 425

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  VE+G ++  G  +L          +D +   +   +   D ++  L    +   V 
Sbjct: 426 SEVLVEHGQEVKAGDVVLRM----FNRELDKESKRLIAEKNSADADQLRLSRQVSDPSVR 481

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-------RSIYLNRLD 180
            +     + +L +   +      ++          +++  +  +       +++    +D
Sbjct: 482 PEERRRIQAELEEAKIRSEGAARQLEVIAEQEESLTIRSPIDGIVTTWEVKKTLLNRPVD 541

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ------ERIVYKSTLELRENI 234
           +  +   +         ++ +  +       ++N L  Q      E         L    
Sbjct: 542 IGQELIQIADKGGPINLEVQIPDDDMAPVLEARNRLLTQMATRLEELRAAFQRGALSGED 601

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E   +   I E     N    +  +E+   LE +Q+  A    
Sbjct: 602 LEAARLEADILEREIRLNQGGLSD-EELEGILEMSQQARARLRE 644



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 7/128 (5%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + ++   +   E      +Q  + R +++             + I  +LE+ +      
Sbjct: 448 RELDKESKRLIAEKNSADADQLRLSRQVSDPSVRPE-----ERRRIQAELEEAKIRSEGA 502

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSS--SNYAQQSQPLMKIVPHSKLTYIRAKV 334
             +L ++ +  E  TI SPI G +   +   +  +      Q L++I        +  ++
Sbjct: 503 ARQLEVIAEQEESLTIRSPIDGIVTTWEVKKTLLNRPVDIGQELIQIADKGGPINLEVQI 562

Query: 335 TPKQIQHV 342
               +  V
Sbjct: 563 PDDDMAPV 570


>gi|308048479|ref|YP_003912045.1| secretion protein HlyD family protein [Ferrimonas balearica DSM
           9799]
 gi|307630669|gb|ADN74971.1| secretion protein HlyD family protein [Ferrimonas balearica DSM
           9799]
          Length = 407

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/328 (11%), Positives = 103/328 (31%), Gaps = 68/328 (20%)

Query: 48  GEILNEDNVV------EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           G ++   ++       +I+    G + +  ++   ++ +G  +   +D      ++ ++V
Sbjct: 56  GSVVQSPHIQLRPGSSQIQ----GQVSEIYIKPNQRLEKGQLVYELDDETYRIAVNQERV 111

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
              NL+      +SAL+ +                               +     ++  
Sbjct: 112 ---NLQAKQVAYQSALEAIG------------------------------IAQSEHAAAL 138

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           + + +   R+ +    + DL  K + LR     +               ++++ L++Q  
Sbjct: 139 KEITITENRIEAA---QEDLNWKRATLRRFEEQNAAVAHT---------ITESQLDEQRN 186

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V  +  +L     ++        +          +            +   A    +L 
Sbjct: 187 AVAAADAQLTAQQAQRDKDQISAEQAKLTIRQRQLDADS--------AKVAVASAEERLA 238

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
             +    Q  + +P  G +           A+  +  M     +   Y+  +V  + I++
Sbjct: 239 QAQWNLSQTKVHAPANGYVTNFLLREGQLVARVPRLQMY----TDEKYVLMRVNHQAIRN 294

Query: 342 VKKGYTATVRFPHYADIREK-KFKAIIE 368
           VK G  A    P Y     + + + I+E
Sbjct: 295 VKVGQQAEFASPVYPGKIFQAEVEGIVE 322


>gi|237728898|ref|ZP_04559379.1| secretion protein HlyD family protein [Citrobacter sp. 30_2]
 gi|226909520|gb|EEH95438.1| secretion protein HlyD family protein [Citrobacter sp. 30_2]
          Length = 378

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 99/294 (33%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +GI+ +   +N   I +G  L   + +     +D  +  +     +ID  K+ L 
Sbjct: 66  VTPQVTGIVSEVTDKNNQLIKKGDVLFKLDPVRYQARVDRLQADLVTATHNIDNLKAQLS 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +      R+    D+      + +KV  +  S +  + +  L +   +  + 
Sbjct: 126 EAVANTTRVSAE---RDRLYKDYQRYLKGSQAKVNPFSESDIDNARQNYLAQDALVKGSV 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            +     S L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 183 AEQTQIQSQLDSMVNGEQSQVASLRAQLAEAKYNLEQTVVRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L     T +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDEAEVVFNALPGQVFTGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   +  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGALQS----LTVVPGTDGVLATIELDPNADVDALPDGIYAQV 347


>gi|149174618|ref|ZP_01853244.1| hypothetical protein PM8797T_10104 [Planctomyces maris DSM 8797]
 gi|148846728|gb|EDL61065.1| hypothetical protein PM8797T_10104 [Planctomyces maris DSM 8797]
          Length = 332

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 114/354 (32%), Gaps = 49/354 (13%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           II++  V+ G  +  G  +LT  D         K+  +  L   ++  K+  +       
Sbjct: 22  IIQEIYVQEGQTVSSGETILTLYDRNLEKSWKSKQQELVMLESELEQSKAKSE------- 74

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                        ++   +     S VFN  + S     +  + ++ ++       +   
Sbjct: 75  -------------VELALRNKEIESDVFNAKLKSSQYLKEKYIHQITNLAWQDFLQD--- 118

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                 +SS+  +  + ++L     V ++ L  + RI      E   N  E       + 
Sbjct: 119 ---YDSISSNGSNEDVFRSL-----VYESRLPDENRITAMLRQESARNSAEVFAARVKLC 170

Query: 246 ELYDE---ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
           E   E   A          ++  +E  +        +L  LE  R+   + +   GT+  
Sbjct: 171 EDQMEELKAIQRKLPAQIRVAMGVEVIKNRLDRVKQELKQLESQRDALQLKAGRYGTV-G 229

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKL-TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             +    +  ++  P++++         +   V  ++I    +G    + F         
Sbjct: 230 IFACEKGDPVKKGTPIVELFDKEHPHLVVE--VPSRKISLFDEGKEVKIMFSG-----NL 282

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           K K  I++I      Q  + ++     +++ +           +  G   +V+ 
Sbjct: 283 KGKGTIQRISEQAILQPGSTES----IILVYVAPAGPLWPEFPM--GTTVDVML 330


>gi|323171509|gb|EFZ57155.1| multidrug resistance protein mdtN [Escherichia coli LT-68]
          Length = 269

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/244 (11%), Positives = 83/244 (34%), Gaps = 24/244 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     + +          ++++ + + +    + +       +       RA       
Sbjct: 2   LFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVNATVEKARAAAKQATD 61

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   + L ++  VS  D+++       +  +L   + + ++    ++ +          
Sbjct: 62  TLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAASAVSGVDALVAQR--- 118

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                           A   + + + +   E  T+ +P  G ++  ++ S   +A   +P
Sbjct: 119 ----------------AAVEADIALTKLHLEMATVRAPFDGRVISLKT-SVGQFASAMRP 161

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +  ++  ++  Y+ A      +++++ G  AT+R         K F+  ++ I   +   
Sbjct: 162 IFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKTFEGKVDSIGYGVLPD 217

Query: 378 DNNL 381
           D  L
Sbjct: 218 DGGL 221


>gi|168263683|ref|ZP_02685656.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|197262166|ref|ZP_03162240.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197240421|gb|EDY23041.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|205347770|gb|EDZ34401.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
          Length = 331

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  + + Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLSQYRTGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   +   +  T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 185 ASLEQARAQLAQAQLDLQDTTLIAPANGTLLT-RAVEPGSMLNAGSTVLTLS-LTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLSQTQPGRDILL---YTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIIVTDADDA-----LRQGMPVTV 322



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 40/339 (11%), Positives = 96/339 (28%), Gaps = 53/339 (15%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
            TW      +  ++  G +  +   V I     G +    V+ G  I  G  L   +   
Sbjct: 21  GTWWYQSRQDDGLTLYGNV--DIRTVNISFRVGGRLASLNVDEGDAIKAGQVLGELDHAP 78

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             + +   K  +   +   D   +             +  E  +        +     ++
Sbjct: 79  YENALMQAKAGVSVAQAQYDLMLAGY-----------RDEEIAQAAAAVRQAQAAYDYAQ 127

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            F      +++S  +    + +   +R   +       A L S Q  L+  +    +  +
Sbjct: 128 NFYNRQQGLWKSRTISANDLENARSSRDQAQ-------ATLKSAQDKLSQYRTGNREQDI 180

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q           K++LE       Q  +      L   AN        E    L     
Sbjct: 181 AQ----------AKASLEQARAQLAQAQLDLQDTTLIAPANGTLLTRAVEPGSMLNAGST 230

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP----LMKIVPHSK- 326
                +++   +    +++ +     G       ++     +  +P    +  + P ++ 
Sbjct: 231 VLTLSLTRPVWVRAYVDERNLSQTQPGR--DILLYTDG---RPDKPYHGKIGFVSPTAEF 285

Query: 327 ------------LTYIRAKVTPKQIQ-HVKKGYTATVRF 352
                           R ++        +++G   TV+F
Sbjct: 286 TPKTVETPDLRTDLVYRLRIIVTDADDALRQGMPVTVKF 324


>gi|161614943|ref|YP_001588908.1| hypothetical protein SPAB_02697 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168230705|ref|ZP_02655763.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168236746|ref|ZP_02661804.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168466408|ref|ZP_02700270.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|168820035|ref|ZP_02832035.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194445005|ref|YP_002040053.1| hypothetical protein SNSL254_A0881 [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194447821|ref|YP_002044846.1| hypothetical protein SeHA_C0945 [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194472665|ref|ZP_03078649.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194736614|ref|YP_002113909.1| hypothetical protein SeSA_A0966 [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|200389773|ref|ZP_03216384.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|238913378|ref|ZP_04657215.1| hypothetical protein SentesTe_19936 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|189041080|sp|A9MSW1|YBHG_SALPB RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710512|sp|B4TC72|YBHG_SALHS RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710513|sp|B4T074|YBHG_SALNS RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710515|sp|B4TQW1|YBHG_SALSV RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|161364307|gb|ABX68075.1| hypothetical protein SPAB_02697 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403668|gb|ACF63890.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194406125|gb|ACF66344.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194459029|gb|EDX47868.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194712116|gb|ACF91337.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195630884|gb|EDX49470.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197290151|gb|EDY29508.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|199602218|gb|EDZ00764.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205334761|gb|EDZ21525.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205343232|gb|EDZ29996.1| membrane protein YbhG [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|320085091|emb|CBY94878.1| UPF0194 membrane protein YP_0975 Flags: Precursor [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
 gi|322616294|gb|EFY13203.1| hypothetical protein SEEM315_11833 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322641664|gb|EFY38300.1| hypothetical protein SEEM954_16720 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322654210|gb|EFY50533.1| hypothetical protein SEEM965_13382 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658125|gb|EFY54392.1| hypothetical protein SEEM19N_19706 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663599|gb|EFY59801.1| hypothetical protein SEEM801_12537 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322671571|gb|EFY67693.1| hypothetical protein SEEM877_10323 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676927|gb|EFY72994.1| hypothetical protein SEEM867_08471 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682852|gb|EFY78871.1| hypothetical protein SEEM180_07522 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686531|gb|EFY82513.1| hypothetical protein SEEM600_06500 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323243196|gb|EGA27216.1| hypothetical protein SEEM1156_06301 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
          Length = 331

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  + + Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLSQYRTGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   +   +  T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 185 ASLEQAKAQLAQAQLDLQDTTLIAPANGTLLT-RAVEPGSMLNAGSTVLTLS-LTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLSQTQPGRDILL---YTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIIVTDADDA-----LRQGMPVTV 322



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 40/339 (11%), Positives = 97/339 (28%), Gaps = 53/339 (15%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
            TW      +  ++  G +  +   V I     G +    V+ G  I  G  L   +   
Sbjct: 21  GTWWYQSRQDDGLTLYGNV--DIRTVNISFRVGGRLASLNVDEGDAIKAGQVLGELDHAP 78

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             + +   K  +   +   D   +             +  E  +        +     ++
Sbjct: 79  YENALMQAKAGVSVAQAQYDLMLAGY-----------RDEEIAQAAAAVRQAQAAYDYAQ 127

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            F      +++S  +    + +   +R   +       A L S Q  L+  +    +  +
Sbjct: 128 NFYNRQQGLWKSRTISANDLENARSSRDQAQ-------ATLKSAQDKLSQYRTGNREQDI 180

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q           K++LE  +    Q  +      L   AN        E    L     
Sbjct: 181 AQ----------AKASLEQAKAQLAQAQLDLQDTTLIAPANGTLLTRAVEPGSMLNAGST 230

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP----LMKIVPHSK- 326
                +++   +    +++ +     G       ++     +  +P    +  + P ++ 
Sbjct: 231 VLTLSLTRPVWVRAYVDERNLSQTQPGR--DILLYTDG---RPDKPYHGKIGFVSPTAEF 285

Query: 327 ------------LTYIRAKVTPKQIQ-HVKKGYTATVRF 352
                           R ++        +++G   TV+F
Sbjct: 286 TPKTVETPDLRTDLVYRLRIIVTDADDALRQGMPVTVKF 324


>gi|15833614|ref|NP_312387.1| hypothetical protein ECs4360 [Escherichia coli O157:H7 str. Sakai]
 gi|168746993|ref|ZP_02772015.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4113]
 gi|168753282|ref|ZP_02778289.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4401]
 gi|168759553|ref|ZP_02784560.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4501]
 gi|168765877|ref|ZP_02790884.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4486]
 gi|168772578|ref|ZP_02797585.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4196]
 gi|168779613|ref|ZP_02804620.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4076]
 gi|168785335|ref|ZP_02810342.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC869]
 gi|168797300|ref|ZP_02822307.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC508]
 gi|195935005|ref|ZP_03080387.1| hypothetical protein EscherichcoliO157_00875 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808298|ref|ZP_03250635.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4206]
 gi|208812241|ref|ZP_03253570.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4045]
 gi|208818771|ref|ZP_03259091.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4042]
 gi|209400736|ref|YP_002272952.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4115]
 gi|217325600|ref|ZP_03441684.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. TW14588]
 gi|254795430|ref|YP_003080267.1| putative HlyD family secretion protein [Escherichia coli O157:H7
           str. TW14359]
 gi|261224794|ref|ZP_05939075.1| hypothetical protein EscherichiacoliO157_09382 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261254310|ref|ZP_05946843.1| hypothetical protein EscherichiacoliO157EcO_00602 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291284851|ref|YP_003501669.1| Auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O55:H7 str. CB9615]
 gi|13363834|dbj|BAB37783.1| putative membrane protein [Escherichia coli O157:H7 str. Sakai]
 gi|187771814|gb|EDU35658.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4196]
 gi|188018481|gb|EDU56603.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4113]
 gi|189002227|gb|EDU71213.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4076]
 gi|189359281|gb|EDU77700.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4401]
 gi|189364394|gb|EDU82813.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4486]
 gi|189369725|gb|EDU88141.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4501]
 gi|189374648|gb|EDU93064.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC869]
 gi|189379946|gb|EDU98362.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC508]
 gi|208728099|gb|EDZ77700.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4206]
 gi|208733518|gb|EDZ82205.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4045]
 gi|208738894|gb|EDZ86576.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4042]
 gi|209162136|gb|ACI39569.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4115]
 gi|209755808|gb|ACI76216.1| putative membrane protein [Escherichia coli]
 gi|209755810|gb|ACI76217.1| putative membrane protein [Escherichia coli]
 gi|209755812|gb|ACI76218.1| putative membrane protein [Escherichia coli]
 gi|209755814|gb|ACI76219.1| putative membrane protein [Escherichia coli]
 gi|209755816|gb|ACI76220.1| putative membrane protein [Escherichia coli]
 gi|217321821|gb|EEC30245.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. TW14588]
 gi|254594830|gb|ACT74191.1| predicted HlyD family secretion protein [Escherichia coli O157:H7
           str. TW14359]
 gi|290764724|gb|ADD58685.1| Auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O55:H7 str. CB9615]
 gi|320191480|gb|EFW66130.1| Putative membrane protein [Escherichia coli O157:H7 str. EC1212]
 gi|320639794|gb|EFX09388.1| hypothetical protein ECO5101_02250 [Escherichia coli O157:H7 str.
           G5101]
 gi|320645294|gb|EFX14310.1| hypothetical protein ECO9389_01994 [Escherichia coli O157:H- str.
           493-89]
 gi|320650604|gb|EFX19070.1| hypothetical protein ECO2687_04879 [Escherichia coli O157:H- str. H
           2687]
 gi|320655798|gb|EFX23721.1| hypothetical protein ECO7815_03265 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661581|gb|EFX28996.1| hypothetical protein ECO5905_02262 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320666604|gb|EFX33587.1| hypothetical protein ECOSU61_16350 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326337528|gb|EGD61363.1| Putative membrane protein [Escherichia coli O157:H7 str. 1044]
 gi|326344724|gb|EGD68473.1| Putative membrane protein [Escherichia coli O157:H7 str. 1125]
          Length = 355

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/402 (11%), Positives = 121/402 (30%), Gaps = 78/402 (19%)

Query: 23  LSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  + 
Sbjct: 13  VGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVR 70

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +L 
Sbjct: 71  EGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELD 130

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               ++  + S      IS+  + L        S        + + S  +A + + + ++
Sbjct: 131 SVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI 188

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                                       ++ +  +   +   R I    D++ L+     
Sbjct: 189 ----------------------------IQAQTRVEAAQATERRIAADIDDSELK----- 215

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                                             +P  G + Y +             ++
Sbjct: 216 ----------------------------------APRDGRVQY-RVAEPGEVLAAGGRVL 240

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--Q 377
            +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     +  +
Sbjct: 241 NMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVE 299

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            ++ + +  + V  +I       +   ++ G P         
Sbjct: 300 TSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|237745952|ref|ZP_04576432.1| multidrug resistance protein K [Oxalobacter formigenes HOxBLS]
 gi|229377303|gb|EEO27394.1| multidrug resistance protein K [Oxalobacter formigenes HOxBLS]
          Length = 321

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 74/211 (35%), Gaps = 17/211 (8%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E    ++ ++L+      +N L  +  +  +   +  N        ++  +   A   ++
Sbjct: 119 ESDYQRAAVDLKR-----RNALISLGAVSGDELTKTQNAYTSSQAAIQAAKAAIAQAEAR 173

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           +   +    +  I +P+ GT+   ++        +  PL+ +VP S+  ++ A     Q+
Sbjct: 174 IAQAKVDLSRTVIRAPVDGTVAK-RTVQIGQKVSEGAPLLVVVPVSE-MHVDANFKEGQL 231

Query: 340 QHVKKGYTATVRFPHYADI-----REKKFKAIIEKIDPIISQQDNNL---QTQEYYEVIL 391
           + V+ G  A +    Y          + F         +I  Q+      +  +   V +
Sbjct: 232 EKVRTGQKAELYSDLYGKSVIYHGTVEGFSGGTGSAFALIPAQNATGNWIKVVQRLPVRI 291

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
           K+         +++  G    V    ++ T 
Sbjct: 292 KLDPEELKAYPLQV--GLSMTVTIDTRDNTP 320



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 40/98 (40%), Gaps = 18/98 (18%)

Query: 10  KRNHPASLKRMTLLSIIGIIGL---ITW----SILLPIEISVSSS--GEILNEDNVVEIK 60
           K + P   +   L  ++ + G+   + W    S  +  + + +++   ++          
Sbjct: 15  KTDSPRVKRLKILGCVVILCGIAYGLYWYFYASHFVSTDNAYTATEVAQVTPSVE----- 69

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
               GI+++ +V +   + QG  L+T +D +T   +  
Sbjct: 70  ----GIVQQVKVVDTQTVKQGDVLVTIDDTDTRLALQQ 103


>gi|206602527|gb|EDZ39008.1| Putative secretion protein HlyD [Leptospirillum sp. Group II '5-way
           CG']
          Length = 330

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 67/231 (29%), Gaps = 45/231 (19%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + +   ++A     Q DL  +  L      S   L      +  +   ++   ++ +   
Sbjct: 101 QARIQEVQAEEERIQSDLKRISRLRRGGYSSTQSLIHLRLALKGAKARIQSLENQIRADQ 160

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I     +   +  N                                 T+LSP+ G + 
Sbjct: 161 GMIERRTAQVAEDRLN-----------------------------LSYTTVLSPVDGQMT 191

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYI---RAKVTPKQIQHVKKGYTATVRFPHYADI 358
                    Y     PL  +VP+          +++T     +V++G    +R   Y   
Sbjct: 192 VKSVV-RGLYVSPGTPLGYVVPYHVWVIANLKESRLT-----YVRRGNPVDIRVDAYPGR 245

Query: 359 RE-KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
                  +I +    ++S       T  + +V+ ++         I+L  G
Sbjct: 246 IFHGHVASIQQTTGAVMSLLPPENATGNFTKVVQRV------PVRIDLDPG 290



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/180 (10%), Positives = 61/180 (33%), Gaps = 8/180 (4%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +  +  +  + I G + W+    +  +  ++           +     G + +  V +
Sbjct: 6   TFVAILLGIGALVIGGFLWWNHSRHLVSTEDAT----VSGRPYPVTVRIPGTVIEVFVHD 61

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L   +  +    +   + S++  R  +D +++ +  +  + + ++   +  
Sbjct: 62  NQPVRKGQILFRLDTGDYQTKLMSDEGSLEIARKKVDVDQARIQEVQAEEERIQSDLKRI 121

Query: 135 EEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                   G Y ST S +     +      ++    ++R+          + +  R  LS
Sbjct: 122 SRL---RRGGYSSTQSLIHLRLALKGAKARIQSLENQIRADQGMIERRTAQVAEDRLNLS 178


>gi|167518053|ref|XP_001743367.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778466|gb|EDQ92081.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1411

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 70/217 (32%), Gaps = 10/217 (4%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL-----L 139
           L  ++ +    + +K+  +  L   +  +   +  L ++   LE        Q       
Sbjct: 289 LRADEAQLRRRVSVKEDEVSELEAQLQAQLGLIQTLRSEKASLESELHGLRAQSNSGSST 348

Query: 140 DFLGKYHSTC--SKVFNYGISSVYRSLKMKLTR-MRSIYLNRLDLENKSSLLRALLSSHQ 196
           D    Y      S +    +     +L+ +L R  R + L   D       L       +
Sbjct: 349 DLTAAYEELQHKSDLQVASLQERVAALEEELRRSQRDVRLAGEDKVAVQHDLEQQRREVE 408

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +  +    L E     Q  L+Q ER   ++   L+      ++ L  ++E ++ A     
Sbjct: 409 RLQSSTSTLLEARTALQERLDQAERAAAEAVDALQRETEALQSSLHDMSEQHEHALQRID 468

Query: 257 NYL-KEISRDLEQNQ-RTFADEMSKLTILEKTREQKT 291
               ++   + +Q+       E  +L    +  +   
Sbjct: 469 ELQSRDAGSEAQQDLIAALTTECEELRTRLEELDATN 505


>gi|254369808|ref|ZP_04985818.1| membrane fusion protein [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122767|gb|EDO66896.1| membrane fusion protein [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 457

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 69/202 (34%), Gaps = 26/202 (12%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI---------TWSILLPIEISVSSS-------GEILNE 53
           K+    ++   TL+   GI G             +  +P  ++V+SS        +++N 
Sbjct: 65  KKTASIAIVVATLILFGGIFGFAEFIQSMIKKGMAAYVPQPVAVTSSVVEKTDWKQVINT 124

Query: 54  -DNVVEIKS-----PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
                 ++S        GI+ +   ++G ++ +G  L   +  +    ++    ++K  +
Sbjct: 125 IGEAQAVQSTAISSQSGGIVSEIHFKSGQEVKKGDLLFKLDTSQLKANLEEALSNLKLAK 184

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                 K   + L  +    +++ +      L  L +  +  S++    + + +      
Sbjct: 185 ----ITKDRYNKLVEQKATSKESADKANADYLSALAQVQNIESQIGFKEVRAPFDGKIGI 240

Query: 168 LTRMRSIYLNRLDLENKSSLLR 189
                  Y N  D     + + 
Sbjct: 241 RNISLGQYFNNGDNAATLTTID 262



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 71/202 (35%), Gaps = 25/202 (12%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S  ++ + + +    T +L+ N+ E  + L  + ++  +   +            ++   
Sbjct: 151 SGQEVKKGDLLFKLDTSQLKANLEEALSNL-KLAKITKDRYNKLVEQKATSKESADKANA 209

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLT 328
            +   ++++  +E     K + +P  G I   ++ S   Y         L  I       
Sbjct: 210 DYLSALAQVQNIESQIGFKEVRAPFDGKI-GIRNISLGQYFNNGDNAATLTTI----DPI 264

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQEYY 387
           +I   V   ++  +  G    + F  Y+D    + F   I  I+  I+  + ++  Q  Y
Sbjct: 265 FITFPVPQNKVSMISVGQ--EINF--YSDSYPGETFTGKITAINSFINDSNRSITVQATY 320

Query: 388 EVILKITDLAFSDNNIELRNGF 409
                      ++ + ++  G 
Sbjct: 321 -----------ANPHHKIVAGM 331


>gi|186471743|ref|YP_001863061.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
 gi|184198052|gb|ACC76015.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
          Length = 361

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 51/156 (32%), Gaps = 12/156 (7%)

Query: 39  PIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           P    V ++G +         V I    SG + +  V +G  + +G  LL  +D      
Sbjct: 41  PYAHGVYATGIVESDQPAGANVNIYPDVSGPVTRLLVHDGDSVRRGDVLLVIDDT----- 95

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNK--YDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +++ ++  L    D  +S LD L  +   + LE A                    +  
Sbjct: 96  --VQRATVAQLEAQADAAQSLLDALRAQPRPETLEVASAQVGAAAASLKLAQDQFDKQKH 153

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            Y I     S          + + R +L+  +   R
Sbjct: 154 AYEIEPKAVSRDTLDNAANGVAVARANLDVVTRQYR 189


>gi|283833911|ref|ZP_06353652.1| HtpX protein [Citrobacter youngae ATCC 29220]
 gi|291070583|gb|EFE08692.1| HtpX protein [Citrobacter youngae ATCC 29220]
          Length = 331

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 58/399 (14%), Positives = 124/399 (31%), Gaps = 90/399 (22%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + + +++ +I   TW      +  +   G +  +   V +     G +    V+ G  I 
Sbjct: 9   LVIAALVAVIAGGTWWYQSRQDNGLMLYGNV--DIRSVNLSFRVGGRLASLAVDEGDAIT 66

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G  L   +     + +   K ++   +   D   +                    E+ +
Sbjct: 67  AGQVLGELDHAPYENALMQAKANVAAAQAQYDLMLAGY-----------------REEEI 109

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                        ++Y  +   R +   L + RSI  N  DLEN  S     L+S +   
Sbjct: 110 AQTAAAVKQAQAAYDYAQNFYNRQIG--LWKSRSISAN--DLENARSSRDQALASLK--- 162

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                       S  D   Q R   +      ++I + K  L        +A L   +  
Sbjct: 163 ------------SAQDKLTQYRSGNRP-----QDIEQAKATLEQAQAELAQAELNLHD-- 203

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                                          T+ SP  GT++  ++    +   +   ++
Sbjct: 204 ------------------------------TTLTSPSDGTLLT-RAVEPGSMLNEGGTVL 232

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----- 374
            +   ++  ++RA V  + +   + G    +   +     +K +   I  + P       
Sbjct: 233 TLS-LTRPVWVRAYVDERNLSQAQPGREILL---YTDGRPDKPYHGKIGFVSPTAEFTPK 288

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           + +  +L+T   Y + + +TD   +     LR G P  +
Sbjct: 289 TVETPDLRTDLVYRLRIVVTDADDA-----LRQGMPVTI 322


>gi|205352076|ref|YP_002225877.1| hypothetical protein SG0797 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|226710511|sp|B5R785|YBHG_SALG2 RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|205271857|emb|CAR36692.1| HlyD-family secretion protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326627118|gb|EGE33461.1| putative secretion protein HlyD [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 331

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  + + Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLSQYRTGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   +   +  T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 185 ASLEQAKAQLAQAQLDLQDTTLIAPANGTLLT-RAVEPGSMLSAGSTVLTLS-LTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLSQTQPGRDILL---YTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIIVTDADDA-----LRQGMPVTV 322



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 39/339 (11%), Positives = 94/339 (27%), Gaps = 53/339 (15%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
            TW      +  ++  G +  +   V I     G +    V+ G  I  G  L   +   
Sbjct: 21  GTWWYQSRQDDGLTLYGNV--DIRTVNISFRVGGRLASLNVDEGDTIKAGQVLGELDHAP 78

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             + +   K  +   +   D   +             +  E  +        +     ++
Sbjct: 79  YENALMQAKAGVSVAQAQYDLMLAGY-----------RDEEIAQAAAAVRQAQAAYDYAQ 127

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            F      +++S  +    + +   +R   +       A L S Q  L+  +    +  +
Sbjct: 128 NFYNRQQGLWKSRTISANDLENARSSRDQAQ-------ATLKSAQDKLSQYRTGNREQDI 180

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q           K++LE  +    Q  +      L   AN        E    L     
Sbjct: 181 AQ----------AKASLEQAKAQLAQAQLDLQDTTLIAPANGTLLTRAVEPGSMLSAGST 230

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS----------NYAQQSQPLMKI 321
                +++   +    +++ +     G       ++             +   +    + 
Sbjct: 231 VLTLSLTRPVWVRAYVDERNLSQTQPGR--DILLYTDGRPDKPYHGKIGFVSPT---AEF 285

Query: 322 VPHS-------KLTYIRAKVTPKQIQ-HVKKGYTATVRF 352
            P +            R ++        +++G   TV+F
Sbjct: 286 TPKTVETPDLRTDLVYRLRIIVTDADDALRQGMPVTVKF 324


>gi|149926781|ref|ZP_01915041.1| Membrane-fusion protein [Limnobacter sp. MED105]
 gi|149824710|gb|EDM83926.1| Membrane-fusion protein [Limnobacter sp. MED105]
          Length = 336

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 65/195 (33%), Gaps = 13/195 (6%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + + +R+   +  ++   + +                L     +      L+  +     
Sbjct: 69  VEKGQRLAALNKQDVNAAVSQASAGFEKAQRDLQRGKLLRDQEVIS-KVQLDNLETAAQA 127

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             ++L+  +   +   I +   G ++  +   +       QP++ +   S    ++A + 
Sbjct: 128 ARAQLSQAQFASQTAEIQAQANGVVLK-RFAQTGEVVSPGQPILLLGSKSSGFVMKASLA 186

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            KQ  H++ G  A V+F     ++       + ++                Y V++++  
Sbjct: 187 DKQAVHIQLGAKAEVQFDALPGVQWP---GKVIELSQAADPATGT------YGVLVEVDT 237

Query: 396 LAFSDNNIELRNGFP 410
            A    N+ L +G  
Sbjct: 238 AA--HENLNLLSGMQ 250



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 11/148 (7%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G+I++  V  G  + +G  L      +    +          +     EK+  D    K
Sbjct: 55  GGVIERINVREGETVEKGQRLAALNKQDVNAAVS---------QASAGFEKAQRDLQRGK 105

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +L       + QL +      +  +++     +S    ++ +   +      +     
Sbjct: 106 --LLRDQEVISKVQLDNLETAAQAARAQLSQAQFASQTAEIQAQANGVVLKRFAQTGEVV 163

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  LL S      M  +L +K AV
Sbjct: 164 SPGQPILLLGSKSSGFVMKASLADKQAV 191


>gi|152999150|ref|YP_001364831.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS185]
 gi|151363768|gb|ABS06768.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS185]
          Length = 406

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 77/241 (31%), Gaps = 30/241 (12%)

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL---- 253
           D+ + +N+ + + ++Q D   Q+  + ++   L+    + +     I     E       
Sbjct: 75  DVNVGQNIKQGDLIAQIDNLTQQNALKEAQASLQSIDAQYRAKQAQIKVAQSEYARNKKM 134

Query: 254 ------------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                          + L     +L++        +  +   +      TI SPI GT++
Sbjct: 135 LVNGAASVSDFDSAESILAVYLAELDELSAEKDKAIISVDSAKLNLGYTTIRSPIDGTVI 194

Query: 302 YNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           Y            +Q    ++++     L  I+A+V+   I +V  G             
Sbjct: 195 YVSV-EEGQTVNNNQGTPSIIELA-QLDLMTIKAQVSEADIINVSAGQAVYFSILGATAK 252

Query: 359 REKKFKAIIE----KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           + +     IE     +    S          YY  +  +      +   +LR G  A+V 
Sbjct: 253 KYRGVLRTIEPGPTLLSGDDSSLLIGDDEAIYYNALFDV-----ENPGNQLRFGMTAQVS 307

Query: 415 F 415
            
Sbjct: 308 I 308



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 56/140 (40%), Gaps = 3/140 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE  V ++G +     +V + +  SG+I+   V  G  I QG  +   +++   + + 
Sbjct: 43  GNIEKVVLTNGVLYPS-KLVSVGAQVSGLIETMDVNVGQNIKQGDLIAQIDNLTQQNALK 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S++++      +++ +    ++Y   +K   +    + DF      +   V+   +
Sbjct: 102 EAQASLQSIDAQYRAKQAQIKVAQSEYARNKKMLVNGAASVSDFDSA--ESILAVYLAEL 159

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
             +       +  + S  LN
Sbjct: 160 DELSAEKDKAIISVDSAKLN 179


>gi|114706398|ref|ZP_01439300.1| hypothetical protein FP2506_01400 [Fulvimarina pelagi HTCC2506]
 gi|114538259|gb|EAU41381.1| hypothetical protein FP2506_01400 [Fulvimarina pelagi HTCC2506]
          Length = 547

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 88/277 (31%), Gaps = 34/277 (12%)

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN- 204
            S   KV        ++S    +T+  S       + ++ + +RA      +++   K  
Sbjct: 75  QSPREKVVEPFTVEAFQSEARPVTQFVSAEGQ--AIPDRQTPVRAKTGGTIEEIVARKGQ 132

Query: 205 -LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L E + +++  L  +   + ++  EL     E   +   +   Y       A       
Sbjct: 133 FLNEGDIIARIALADRSSQIAQAEAELSRRQGEFDRVRGLVERGYSTRAELEAAE----- 187

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
                     A   + L  + +T+    I +PI G ++ N       + + S  +   V 
Sbjct: 188 -------AELAVARASLASIRQTQGDTEIRAPITG-VLENFDLDLGEFIEASTEVGTQV- 238

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            +    +  +V  + I  ++ G TA V F     I     +  +  +    +        
Sbjct: 239 DNDPLSVEVQVAQQSIGRIELGQTAQVTF-----ITGATREGEVTYVASSANSSTRTF-- 291

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                      ++   + + ++  G  AEV      T
Sbjct: 292 ---------PVEITIPNPDRDIPAGISAEVRIPVGET 319



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 42/132 (31%), Gaps = 1/132 (0%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+   VS+ G+ + +     +++   G I++     G  + +G  +      + +  I  
Sbjct: 96  PVTQFVSAEGQAIPDRQT-PVRAKTGGTIEEIVARKGQFLNEGDIIARIALADRSSQIAQ 154

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  +   +   D  +  ++   +    LE A                +         I+
Sbjct: 155 AEAELSRRQGEFDRVRGLVERGYSTRAELEAAEAELAVARASLASIRQTQGDTEIRAPIT 214

Query: 159 SVYRSLKMKLTR 170
            V  +  + L  
Sbjct: 215 GVLENFDLDLGE 226


>gi|300777785|ref|ZP_07087643.1| multidrug resistance protein A [Chryseobacterium gleum ATCC 35910]
 gi|300503295|gb|EFK34435.1| multidrug resistance protein A [Chryseobacterium gleum ATCC 35910]
          Length = 348

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 117/300 (39%), Gaps = 13/300 (4%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           + +  KR + +      +L I GI G++++ +    +   ++  +I  E  +  + S  S
Sbjct: 6   LTQKEKRINKSITLLAWILIISGITGMVSFYLFSR-KNVTTNDAQI--EQYITPVSSKVS 62

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK  +      + +G  L+  ++ E  + + + + ++      I T +S ++   +  
Sbjct: 63  GFIKTIKFNENQFVHKGDTLIIIDNREFLNQVQMAEANLHANAATISTIESGVNTKESDT 122

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +++    S +  +  +  +      K      ++  +  +           N L LE +
Sbjct: 123 KIIDAKIASAKIDI--WRTEQDFKRYKNLLAEDAATEQEFENVKASYEQSKANLLALEQQ 180

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            + +RA  +  Q  +  +K+  ++++ S N+  +        T      + ++      +
Sbjct: 181 KNAVRAGANEQQTKVAPVKSQIQQSSASLNN-AKLYLSYTVITAPYDGWVGKKTIQEGQL 239

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT------REQKTILSPIAG 298
            +   +A ++  +  K I  + ++ Q    D+  ++ I          + +   +SP +G
Sbjct: 240 IK-EGQALVQIVSKEKWIIANYKETQLGQIDQSKEVIITADAYPDVEFKGRILSVSPASG 298


>gi|254234367|ref|ZP_04927690.1| hypothetical protein PACG_00210 [Pseudomonas aeruginosa C3719]
 gi|126166298|gb|EAZ51809.1| hypothetical protein PACG_00210 [Pseudomonas aeruginosa C3719]
          Length = 150

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 42/136 (30%), Gaps = 10/136 (7%)

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I +P AG +   +      Y     PL+ +VP  +   + A     Q++ ++ G    
Sbjct: 10  TEIRAPFAGRVGQRKVR-LRQYVTPGLPLLAVVPLEQAYVV-ANYKETQLERIRPGQPVE 67

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY------YEVILKITDLAFSDNNI 403
           +    +      +  ++      + +    +  T  +      + V +++   A      
Sbjct: 68  LEVDTFGRRWRGRVDSVAPASGAVFALLPPDNATGNFTKIVQRFPVRIRLDADAAERG-- 125

Query: 404 ELRNGFPAEVLFTAKN 419
            L  G         + 
Sbjct: 126 RLLPGMSVIATVDTRE 141


>gi|56414082|ref|YP_151157.1| hypothetical protein SPA1935 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197363005|ref|YP_002142642.1| hypothetical protein SSPA1804 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|81360222|sp|Q5PG34|YBHG_SALPA RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|226710514|sp|B5BC09|YBHG_SALPK RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|56128339|gb|AAV77845.1| HlyD-family secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094482|emb|CAR59999.1| HlyD-family secretion protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 331

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  + + Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLSQYRTGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   +   +  T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 185 ASLEQAKAQLAQAQLDLQDTTLIAPANGTLLT-RAVEPGSMLNAGSTVLTLS-LTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLSQTQPGRDILL---YTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIIVTDADDA-----LRQGMPVTV 322



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 40/339 (11%), Positives = 97/339 (28%), Gaps = 53/339 (15%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
            TW      +  ++  G +  +   V I     G +    V+ G  I  G  L   +   
Sbjct: 21  GTWWYQSRQDDGLTLYGNV--DIRTVNISFRVGGRLASLNVDEGDAIKAGQVLGELDHAP 78

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             + +   K  +   +   D   +             +  E  +        +     ++
Sbjct: 79  YENALMQAKAGVSVAQAQYDLMLAGY-----------RDEEIAQAAAAVRQAQAAYDYAQ 127

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            F      +++S  +    + +   +R   +       A L S Q  L+  +    +  +
Sbjct: 128 NFYNRQQGLWKSRTISANDLENARSSRDQAQ-------ATLKSAQDKLSQYRTGNREQDI 180

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q           K++LE  +    Q  +      L   AN        E    L     
Sbjct: 181 AQ----------AKASLEQAKAQLAQAQLDLQDTTLIAPANGTLLTRAVEPGSMLNAGST 230

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP----LMKIVPHSK- 326
                +++   +    +++ +     G       ++     +  +P    +  + P ++ 
Sbjct: 231 VLTLSLTRPVWVRAYVDERNLSQTQPGR--DILLYTDG---RPDKPYHGKIGFVSPTAEF 285

Query: 327 ------------LTYIRAKVTPKQIQ-HVKKGYTATVRF 352
                           R ++        +++G   TV+F
Sbjct: 286 TPKTVETPDLRTDLVYRLRIIVTDADDALRQGMPVTVKF 324


>gi|119592173|gb|EAW71767.1| huntingtin interacting protein 1, isoform CRA_a [Homo sapiens]
          Length = 616

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 5/192 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           LI+     I  L+  ++  K+    +  +        E+   +      +    C +   
Sbjct: 349 LIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDC-EFLR 407

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +  + R  +      RS+       +        L   + + +    +L  KNA    
Sbjct: 408 AELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNA---- 463

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ +Q  +  ++ ++L     E ++ L  I++       E    L+ + ++L  +QR   
Sbjct: 464 EVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQ 523

Query: 275 DEMSKLTILEKT 286
                L    ++
Sbjct: 524 VLQGSLETSAQS 535


>gi|325168773|ref|YP_004280563.1| macrolide-specific efflux protein MacA precursor [Agrobacterium sp.
           H13-3]
 gi|325064496|gb|ADY68185.1| macrolide-specific efflux protein MacA precursor [Agrobacterium sp.
           H13-3]
          Length = 356

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 56/211 (26%), Gaps = 11/211 (5%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R          E  + ++  L   N +            + +  ++E         
Sbjct: 73  LKAQRRARDIHRHQAELAYNRQKTLNSANIVSTANRETAEAAFRALQAEVEALDAQILQA 132

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKV 334
             ++   E       + +PI GT+V      +       Q    IV  +      ++ +V
Sbjct: 133 SVEVENAEVNLGYTKVRAPIDGTVVAV-VTKAGQTLNAVQAAPTIVSLAQLDTMRVKVQV 191

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREK------KFKAIIEKIDPIISQQDNNLQTQEYYE 388
           +   I  V+ G    VRF               + +     I    +         +  +
Sbjct: 192 SETDIGRVRVGQ--DVRFTIMGYPVSPISAKLEQIEPAPTTIAADSATSTGTSAAVQGAQ 249

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +         + +  LR    A V      
Sbjct: 250 AVYYNGLFNTPNADGRLRPMMTASVRIIVGK 280



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 50/135 (37%), Gaps = 4/135 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V +S  +     +V + +  SG +K   VE G ++ QG  +   +     + + + 
Sbjct: 8   VEEAVVASAVLEPS-RLVNVGAQVSGQLKNLHVELGQKVKQGDLIGEVDSTPQANGLRIA 66

Query: 100 KVSIKNLRCHIDTE---KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++ NL+         +   +   N+   L  A              + +  ++V    
Sbjct: 67  SAALANLKAQRRARDIHRHQAELAYNRQKTLNSANIVSTANRETAEAAFRALQAEVEALD 126

Query: 157 ISSVYRSLKMKLTRM 171
              +  S++++   +
Sbjct: 127 AQILQASVEVENAEV 141


>gi|17863974|gb|AAL46999.1|AF448250_3 putative HylD secretion protein [Bacteroides coprosuis DSM 18011]
          Length = 358

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/355 (9%), Positives = 93/355 (26%), Gaps = 73/355 (20%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK  QV+ G  +  G  L           ID+ +  +   +   +   +A      + 
Sbjct: 59  GRIKDIQVDEGDFVKAGQVLAHM-------QIDVLEAQLAEAQAQYNRSLTAKSSAYAEI 111

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            + E   E+ +  ++    ++ +   +                                 
Sbjct: 112 KLRESNVEAAKATVIQRKSEFDAADKRFLR------------------------------ 141

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                             + L ++NA+S+  L+  +R +  S   +     +       +
Sbjct: 142 -----------------TEELVKRNAISRQQLDDDKRAMRSSEAAILAAQAQVAAAQAAV 184

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                +A    A      +                +  ++   +   +++P  G + Y +
Sbjct: 185 EAAKSQAIGAEAAVKAAQAT---------------INRIQADIDDSQLVAPRDGRVQY-R 228

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                        ++ ++  S   Y+   +   +   +  G  A +              
Sbjct: 229 IAQPGEVLGAGGKILNLIDLSD-VYMTFFLPEAEAGRLTIGSEAHIIIDALPKYVIPARV 287

Query: 365 AIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
             +        +  +  N + +  + V  +I           ++ G P  V    
Sbjct: 288 TFVASAAQFTPKTVETANERQKLMFRVKAQIDKELLQKYIELVKTGVPGVVWIKT 342


>gi|253568314|ref|ZP_04845725.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251842387|gb|EES70467.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 416

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 110/314 (35%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTCSK 151
            + I + +V   N   ++D E      L  K +  E  + ES   +    L +  +    
Sbjct: 45  AENIQIAEVKEDNFMEYVDVEGLIQPILTIKINTREAGSVESIIGEEGSLLQQGDTIIVL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + S+         +M +     +++E KS  L+    ++  +L  +K        
Sbjct: 105 SNPDLLRSIEDQRDEWEKQMITYQEQEIEMEQKSLNLKQQALTNNYELERLK-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        + +  + E +   +  N    + +L   + +  I ++L +N R
Sbjct: 157 -KSIALDREEFQMGVKSKAQLQVAEDEYNYKLKNAALQQESLRHDSAVTMIRKELIRNDR 215

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  K     +      + +PI G + + +  +        + + +I        I 
Sbjct: 216 ER--ERKKYERTHERLNNLVVTAPIKGQLSFVRV-TPGQQVSSGESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPIISQQ-DNNLQTQE 385
             ++   I  +  G  ATV +    Y     K    + ++   +D + +    +N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATVNYQGKKYPLKITKVVPEVKDRMFDVDLVFTGDMPDNVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEQA 345


>gi|330824326|ref|YP_004387629.1| secretion protein HlyD family protein [Alicycliphilus denitrificans
           K601]
 gi|329309698|gb|AEB84113.1| secretion protein HlyD family protein [Alicycliphilus denitrificans
           K601]
          Length = 346

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 35/333 (10%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           D  +     L  ++D  +  L F      +     E         L    +   +     
Sbjct: 34  DHGQQDALRLYGNVDIREVQLAFRQPGRVMQMAFDEGDAVSAGARLAALDAQPYREALAA 93

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN--LFEKNAVSQN 214
             +  +  + +L ++R     +   + + +L +A   + + +    +   L    A SQ 
Sbjct: 94  AQAQVQVAQAELAKLRRGLRPQEITQAREALRQAQALATETERNFQRQSGLLASGASSQ- 152

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                 R V  +     +     +     +++  +    E          D+   +   A
Sbjct: 153 ------RTVDAARTARDQAAAGVEAAKAALSQASEGFRKE----------DIAAAEARLA 196

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +             +++P +GT++  +     +    SQ  +  +   K  Y+RA V
Sbjct: 197 AAQAAAAQATTALADTELMAPSSGTVIA-RVREPGSMV-ASQSAVYSLSLDKPVYVRAYV 254

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEV 389
               +  +  G    V+    +D  EK ++  I  I P       + +  +L+T   Y +
Sbjct: 255 GESDLGRIAPGTVVRVK----SDSSEKVYRGQIGFISPRAEFTPKTVETTDLRTDLVYRL 310

Query: 390 ILKITDLAFSDNNIELRNGFPA--EVLFTAKNT 420
            + I +   +D++  LR G P   EV   A   
Sbjct: 311 RIVIDE---ADSDSALRQGMPVTIEVDAKAGTR 340



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 12/127 (9%), Positives = 35/127 (27%), Gaps = 4/127 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +   + G  +  G  L   +     + +   +  ++  +  +   +  L       
Sbjct: 60  GRVMQMAFDEGDAVSAGARLAALDAQPYREALAAAQAQVQVAQAELAKLRRGL----RPQ 115

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++ +     R+ Q L    + +           +S  R++    T            +  
Sbjct: 116 EITQAREALRQAQALATETERNFQRQSGLLASGASSQRTVDAARTARDQAAAGVEAAKAA 175

Query: 185 SSLLRAL 191
            S     
Sbjct: 176 LSQASEG 182


>gi|325923423|ref|ZP_08185085.1| RND family efflux transporter, MFP subunit [Xanthomonas gardneri
           ATCC 19865]
 gi|325546097|gb|EGD17289.1| RND family efflux transporter, MFP subunit [Xanthomonas gardneri
           ATCC 19865]
          Length = 380

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 17/177 (9%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + + +  LR +   Y  A       L     D++Q +    +  ++  +        T+
Sbjct: 114 AVAQSEAQLRKLENSYRRATQLVGQQLVSA-ADVDQLKFDVENSRAQYRLASLELSYTTV 172

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +PI+G I      +  N+ Q + P+ +IV           V  +++  +K G   T+  
Sbjct: 173 QAPISGVIASRSIKT-GNFVQINTPIFRIV-DDSQLEATLNVPERELATLKSGQPVTLLA 230

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                   ++F   +++I P++            + V+      AF      L+ G 
Sbjct: 231 DALP---GQQFIGKVDRIAPVVDSGSGT------FRVV-----CAFGQGAEALQPGM 273



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 49/160 (30%), Gaps = 2/160 (1%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  +        + +  SG+     VE G ++  G  L+  +       +   +  ++
Sbjct: 65  TGTAALEPRAEAQVV-AKTSGVALAVMVEEGQKVSAGQALVRLDPDRAHLAVAQSEAQLR 123

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L          +         +++     E     +               IS V  S 
Sbjct: 124 KLENSYRRATQLVGQQLVSAADVDQLKFDVENSRAQYRLASLELSYTTVQAPISGVIASR 183

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            +K      I      + +  S L A L+  +++L  +K+
Sbjct: 184 SIKTGNFVQINTPIFRIVDD-SQLEATLNVPERELATLKS 222


>gi|262403712|ref|ZP_06080270.1| multidrug resistance efflux pump [Vibrio sp. RC586]
 gi|262350216|gb|EEY99351.1| multidrug resistance efflux pump [Vibrio sp. RC586]
          Length = 354

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 73/227 (32%), Gaps = 21/227 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  Q +       +  ++ +   +     SL+  L +  ++Y  R       +  +A   
Sbjct: 61  RNNQQVHQGDVLFTIDARKYRIALEQAELSLQSALEKEATLYSQREAALANIARTQATYD 120

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           +  ++   ++ L  +  +S++ L+        +   L+      K +   + +   ++  
Sbjct: 121 NAHREYLRLQKLSTQQVISRSALDNAFAQNQVAHANLKAEQQSLKVIEAQLGKGEGQSTA 180

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
               +                   + +   +       +L+P  G +   Q     + A 
Sbjct: 181 VRVAH-------------------NGIEKAQLDLANTRVLAPSDGVVTNLQL-EVGSMAN 220

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            +QP++  +P     ++      K + +V   Y A V F  Y     
Sbjct: 221 ANQPMLTFIPTGS-LWVTGDFREKSVANVDTSYHAMVAFDAYPGQVY 266



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 11/209 (5%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            +      I+  I L  + I       +++ G +  +  VV++    SG + + Q+ N  
Sbjct: 7   FRLWMRTLIVLFIVLFFYIIFADQHSPITTEGRV--QGYVVQVAPEVSGKVTQVQIRNNQ 64

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSI-----KNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           Q+ QG  L T +  +    ++  ++S+     K    +   E +  +    +        
Sbjct: 65  QVHQGDVLFTIDARKYRIALEQAELSLQSALEKEATLYSQREAALANIARTQATYDNAHR 124

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA- 190
           E    Q L        +            + +LK +   ++ I       E +S+ +R  
Sbjct: 125 EYLRLQKLSTQQVISRSALDNAFAQNQVAHANLKAEQQSLKVIEAQLGKGEGQSTAVRVA 184

Query: 191 --LLSSHQKDLTMMKNLF-EKNAVSQNDL 216
              +   Q DL   + L      V+   L
Sbjct: 185 HNGIEKAQLDLANTRVLAPSDGVVTNLQL 213


>gi|255283856|ref|ZP_05348411.1| efflux transporter, RND family, MFP subunit [Bryantella
           formatexigens DSM 14469]
 gi|255265577|gb|EET58782.1| efflux transporter, RND family, MFP subunit [Bryantella
           formatexigens DSM 14469]
          Length = 713

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 84/245 (34%), Gaps = 17/245 (6%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    I  +V+ +G++  ++    + +     +K   VE G Q+ +G  L   + +   +
Sbjct: 39  AERGKINHTVTGTGKVT-QNREQAVSTLAGQTVKSIYVEEGQQVKKGDVLFEIDLVSLKE 97

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            I  +K  +K        +  + D  +++    +K   S+     D+     ++      
Sbjct: 98  QILEQKQEMK------KADLQSQDAASSRAAQAQKNAISQSRAAEDY--SVAASKGNTAV 149

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              ++  +  K KL  ++     +  ++    +L+      Q++       +E+    + 
Sbjct: 150 SRAAAELKKAKQKLETLKQSDDGQTGVDTVEEILKQTCEDKQEE-------YEEAVAYKE 202

Query: 215 DLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +L    +  V K+  +L         M       +     +      + +  L   +   
Sbjct: 203 ELEDAIDETVKKALADLAAGTKTAARMTAETEIHFSGETGQADGKSFDAAGALHAAETED 262

Query: 274 ADEMS 278
           A  +S
Sbjct: 263 ASVLS 267


>gi|165923894|ref|ZP_02219726.1| auxiliary transport protein, membrane fusion protein family
           [Coxiella burnetii RSA 334]
 gi|165916648|gb|EDR35252.1| auxiliary transport protein, membrane fusion protein family
           [Coxiella burnetii RSA 334]
          Length = 326

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 61/407 (14%), Positives = 124/407 (30%), Gaps = 97/407 (23%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L R     + G++ L   S   P+ +     G+ +   + V      SG++K   V  G
Sbjct: 2   RLIRPIFWLLFGMLLLSGCSKNQPVLLQGYVEGQFIYLSSSV------SGLLKSLLVYRG 55

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +   L   +        + ++  ++  +  +  EK  L+ L               
Sbjct: 56  DSVKEDQTLFILDP-------EPQQSELQEAKAKLTQEKENLENL--------------- 93

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                  G+  +  +++      ++   +  + T  R  +L R+   +K  L +A     
Sbjct: 94  -----VKGQRQTILNRIIAEREQAIADMIYAQQTLTRFQHLYRVRAISKDELDKATADYK 148

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                      +K  V+Q + N  E             + E+K+++     + D A    
Sbjct: 149 ----------AKKQIVNQTEANLAE-----------AQLGERKHLILAQQAVVDAAQANV 187

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  + E                          +QKT+++P  G I     F    Y    
Sbjct: 188 AKLIWE-------------------------LDQKTVVAPKNGNIFD-TFFKVGEYVPAG 221

Query: 316 QPL-MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           QP+   + P++        +    +  +K G     +       R     A +  I P  
Sbjct: 222 QPVTALLTPNNIKLIF--YIPEPLLSRLKLGTVVEFKCDGCTMQR-----AKVTYISPEA 274

Query: 375 SQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                       + +  Y V   I +     N ++   G P +V   
Sbjct: 275 EYTPPIIYSQKSRAKLVYRVECDIPE----KNALKFHAGQPVDVYLH 317


>gi|332665644|ref|YP_004448432.1| RND family efflux transporter MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332334458|gb|AEE51559.1| efflux transporter, RND family, MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 355

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 59/158 (37%), Gaps = 16/158 (10%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
             + ++  +    +  + +  LEK      + +PI+GT+   ++     +   +  +M I
Sbjct: 140 TQQQVDDAENGIENIKANIRGLEKQISMTYVRAPISGTVSG-KTVEKGAFLAPAMKIMDI 198

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           +   +   + A +T  ++  +KKG    +R   Y +   K F  ++  ID          
Sbjct: 199 I-DIRRLKMAAYLTDDEVLQIKKGQRVELRTDVYPN---KAFVGVVNLIDVKADNAQR-- 252

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                + V +++ + + +     L+ G      F    
Sbjct: 253 -----FLVEVELANPSAT----PLKAGMDGVAEFNTGR 281


>gi|298717519|ref|YP_003730161.1| RND efflux system periplasmic membrane- fusion protein [Pantoea
           vagans C9-1]
 gi|298361708|gb|ADI78489.1| Putative RND efflux system, periplasmic membrane- fusion protein
           precursor [Pantoea vagans C9-1]
          Length = 382

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 64/189 (33%), Gaps = 11/189 (5%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +   +G + ++           GII+K     G ++  G  L   +        D     
Sbjct: 51  AGRVTGSMTSDVRPQV-----DGIIQKRLFREGDEVKAGQILYQIDPASYQASYDQALAQ 105

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +KN +  + + K   +    +Y  L K      +   D    Y    + V  Y  +    
Sbjct: 106 LKNAQALVKSSKLKAE----RYAALVKENGVSRQDADDAQATYQQNVASVDQYRAALESA 161

Query: 163 SLKMKLTRMRSIYLNRLDLENKS--SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + +  T++++    R+ + + +  +L+ A  +S    +  +  ++     S   L + +
Sbjct: 162 RISLNYTQIKAPISGRIGISSVTPGALVTASQTSALATIRALDPIYVDLTQSSVQLLKLK 221

Query: 221 RIVYKSTLE 229
           R        
Sbjct: 222 RQQASLQQS 230



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 37/131 (28%), Gaps = 10/131 (7%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q D  + K LF +    +      +           + + + KN    +     +A    
Sbjct: 65  QVDGIIQKRLFREGDEVKAGQILYQIDPASYQASYDQALAQLKNAQALVKSSKLKAERYA 124

Query: 256 A---------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           A             +     +QN  +     + L     +     I +PI+G I    S 
Sbjct: 125 ALVKENGVSRQDADDAQATYQQNVASVDQYRAALESARISLNYTQIKAPISGRI-GISSV 183

Query: 307 SSSNYAQQSQP 317
           +       SQ 
Sbjct: 184 TPGALVTASQT 194


>gi|156978227|ref|YP_001449133.1| hypothetical protein VIBHAR_07032 [Vibrio harveyi ATCC BAA-1116]
 gi|156529821|gb|ABU74906.1| hypothetical protein VIBHAR_07032 [Vibrio harveyi ATCC BAA-1116]
          Length = 349

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 72/246 (29%), Gaps = 25/246 (10%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +L++      +  +  +   ++     L+       + +      +   S       + +
Sbjct: 63  ELVEKGQPLFAIDASSYQLKVAQAKAELRQARESDSAKWQQLAAAKQTQSQREFEYHNAK 122

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           + LT  + L  K   ++ +L+        ++  +     E K +   ++     A +E A
Sbjct: 123 QKLTRNQKLRNKGLATEQELDDAITNTQVASSAVEAANAEVKRIEAELSTQDRTAAIELA 182

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                 KL   E       I++   G +   Q  S  +Y  Q  
Sbjct: 183 ET--------------------KLASAELDLSHTQIVAQTEGVVTNLQLQS-GSYITQGT 221

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
             + +V      +I A    K I  +  G    V F        K F   +   +  I  
Sbjct: 222 ASLLLV-DEAHAWISADFNEKGIDKLTNGREVLVSFDALP---GKVFTGEVSSQERAIYD 277

Query: 377 QDNNLQ 382
            +N   
Sbjct: 278 TNNANG 283



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 79/240 (32%), Gaps = 6/240 (2%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            NV  I    SG+I    V NG  + +G PL   +       +   K  ++  R     +
Sbjct: 41  RNVATIAPEVSGVITDVMVNNGELVEKGQPLFAIDASSYQLKVAQAKAELRQARESDSAK 100

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              L          E  + + +++L       +   +       +     +        +
Sbjct: 101 WQQLAAAKQTQSQREFEYHNAKQKLTRNQKLRNKGLATEQELDDAITNTQVASSAVEAAN 160

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRE 232
             + R++ E  +    A +   +  L   + +L     V+Q      E +V    L+   
Sbjct: 161 AEVKRIEAELSTQDRTAAIELAETKLASAELDLSHTQIVAQT-----EGVVTNLQLQSGS 215

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            I +    L  ++E +   + +F     +   +  +   +F     K+   E + +++ I
Sbjct: 216 YITQGTASLLLVDEAHAWISADFNEKGIDKLTNGREVLVSFDALPGKVFTGEVSSQERAI 275


>gi|149374541|ref|ZP_01892315.1| Membrane-fusion protein [Marinobacter algicola DG893]
 gi|149361244|gb|EDM49694.1| Membrane-fusion protein [Marinobacter algicola DG893]
          Length = 360

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 79/229 (34%), Gaps = 20/229 (8%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELR 231
            +Y   L L+ +    R +    +   T+ + + E+ A V + D+      +  S    R
Sbjct: 57  RLYEPGLMLQGQLEPWRTVSVGARVAGTVEELMVEQGARVEKGDVL-----LRLSEDGRR 111

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++ + ++ +R + E    A  +  +       ++   Q   +   ++L       +   
Sbjct: 112 TSVDQWQSRIRKL-EADLSAAQKLRSRNLTSESEVLTLQSELSAARAELAQARLAVDNLE 170

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
             +P  GT+   +     +  Q   PL+++V          ++  + +  V++G   T+R
Sbjct: 171 PRAPFDGTVNR-RDVDLGDLVQVGSPLLELV-RVDRLKATGQIPQQSVGAVEEGQAVTIR 228

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
                 +     + ++  +         +      + V + I +     
Sbjct: 229 -----TLDGDSLQGVVNFVASAADPDTRS------FPVEVSIDNPERKR 266



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 43/112 (38%), Gaps = 12/112 (10%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G++      V + +  +G +++  VE G+++ +G  LL   +      +D  +  I+ L
Sbjct: 66  QGQLEP-WRTVSVGARVAGTVEELMVEQGARVEKGDVLLRLSEDGRRTSVDQWQSRIRKL 124

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
              +   +            L     + E ++L    +  +  +++    ++
Sbjct: 125 EADLSAAQK-----------LRSRNLTSESEVLTLQSELSAARAELAQARLA 165


>gi|83649215|ref|YP_437650.1| membrane-fusion protein [Hahella chejuensis KCTC 2396]
 gi|83637258|gb|ABC33225.1| Membrane-fusion protein [Hahella chejuensis KCTC 2396]
          Length = 345

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 24/215 (11%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS----- 263
             V+   + + +R+     + +  +  E    +       D+A      + K  +     
Sbjct: 64  GIVADISVKEGQRVRAGELIAVL-DREEIAAEVAQAEAYRDDAQRSLERFKKLYASKVAP 122

Query: 264 -RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              ++  +     E ++L +     +   I++P  G ++  +    +      +P     
Sbjct: 123 LEQVQSAETALRVESARLKVARFNFKHSEIIAPSDGVVLR-RLIEPNELVSAQRPAFVFA 181

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA-DIREKKFKAIIEKIDPIISQQDNNL 381
             +    IR  V+ K+I  V++G  A VR   Y              K  P         
Sbjct: 182 QENAGWVIRVGVSDKEIVRVREGDKAEVRLDAYPGQALNGDVYETAAKASP--------- 232

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                +EV ++        N+  L +G  A V  T
Sbjct: 233 -GSGVFEVEVR-----LHPNDARLLSGMVARVTLT 261



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 36/101 (35%), Gaps = 1/101 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+    V+ G ++  G  +   +  E    +   +    + +  ++  K          
Sbjct: 64  GIVADISVKEGQRVRAGELIAVLDREEIAAEVAQAEAYRDDAQRSLERFKKLYASKVAPL 123

Query: 125 DVLEKAFES-REEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           + ++ A  + R E     + +++   S++       V R L
Sbjct: 124 EQVQSAETALRVESARLKVARFNFKHSEIIAPSDGVVLRRL 164


>gi|323699197|ref|ZP_08111109.1| efflux transporter, RND family, MFP subunit [Desulfovibrio sp.
           ND132]
 gi|323459129|gb|EGB14994.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           desulfuricans ND132]
          Length = 362

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 79/216 (36%), Gaps = 18/216 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI--NELYDEANLEFANYLKEISRDLE 267
            V++ D  + +  + ++   L     + + M +++       +  LE  + L   ++D +
Sbjct: 87  LVARIDARELKARISEAKANLDLAQAKLQYMEKNLPRQRTLVQKRLEAQDSLDVATQDAQ 146

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             + + A   +KL  L       +I SPI G +    +            +  ++     
Sbjct: 147 MARFSVAAAKAKLDTLRVQLSYTSIYSPIDGVVSQVAA-QEGETIVSGLSVSNLITVLNP 205

Query: 328 TYIRA--KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
             +     V    +  VK G         Y   REK F+ ++++I P    +DN +    
Sbjct: 206 EMLEMWIYVDETDVGRVKAGLHVRYTVDAY---REKVFEGVVDRIYPEPEIRDNIV---- 258

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAE--VLFTAKN 419
           YY  ++K+T          LR     +  ++   K+
Sbjct: 259 YYRTLVKVTREQAD----FLRPEMTTQCKIIVRTKD 290



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 54/187 (28%), Gaps = 19/187 (10%)

Query: 18  KRMTLLSIIGIIGLITWSILL------------------PIEISVSSSGEILNEDNVVE- 58
           K + +L    + G   W                       +   + ++G +  +      
Sbjct: 3   KLIFILIAALLTGGGVWYFTAGQSTDRIKVLKTAKVARGSVSKVLEATGIVKAQVGAQVK 62

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I +  +G+++   V+ G  + +G  +   +  E    I   K ++   +  +   +  L 
Sbjct: 63  IGAQATGVLESVPVKVGDHVRKGDLVARIDARELKARISEAKANLDLAQAKLQYMEKNLP 122

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                     +A +S +    D      S  +         V  S     + +  +    
Sbjct: 123 RQRTLVQKRLEAQDSLDVATQDAQMARFSVAAAKAKLDTLRVQLSYTSIYSPIDGVVSQV 182

Query: 179 LDLENKS 185
              E ++
Sbjct: 183 AAQEGET 189


>gi|301061896|ref|ZP_07202626.1| efflux transporter, RND family, MFP subunit [delta proteobacterium
           NaphS2]
 gi|300444000|gb|EFK08035.1| efflux transporter, RND family, MFP subunit [delta proteobacterium
           NaphS2]
          Length = 388

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 58/169 (34%), Gaps = 9/169 (5%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +        ++S   G I +  V  G  +  G PL+  +  E    +D  + ++ +
Sbjct: 69  APGTVRPRQETR-VESRVQGRIVEVLVRPGDLVKTGDPLVVLDSRELQARLDGARQAVLS 127

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFES-----REEQLLDFLGKYHSTCSKVFNYGISSV 160
            +   D  + A++     +   + A+       + E       +   +  +    G++  
Sbjct: 128 AKARRDQARQAVNAAEAAFTQTKAAYGRVKTYYKAEAATKQQLEEAESMFEQAKAGLTQA 187

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
              LK     ++     +  LE       A + S + +  + + L E  
Sbjct: 188 RGGLKGSEAGIK--EAEKGVLEASIVQNYAEIRS-EANGQVAERLVEPG 233



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 79/300 (26%), Gaps = 47/300 (15%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +   +E   + R  ++L   G    T   +       +   L      + S    R    
Sbjct: 77  QETRVESRVQGRIVEVLVRPGDLVKTGDPLVVLDSRELQARLDGARQAVLSAKARRDQAR 136

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +   A  +  +     +K  ++  A ++  L + E +  ++   L +     K    
Sbjct: 137 QAVNAAEAAFTQTKAAYGRVKTYYKAEAATKQQLEEAESMFEQAKAGLTQARGGLKGSEA 196

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I E                                 +      +    I S   G +  
Sbjct: 197 GIKEAEK-----------------------------GVLEASIVQNYAEIRSEANGQVAE 227

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +     + A   +PL+ I+       + A V    I  +K G    V          K 
Sbjct: 228 -RLVEPGDMAFPGKPLL-ILQTRCAMRLEAPVPEGYIDRIKMGENLKVGINALK----KS 281

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
              ++ +I P       +      + V + + D         L  G    ++      ++
Sbjct: 282 LSGLVTEIIPAADPATRS------FMVKVDLPDTE------GLYPGMFGRLMVPVGRISV 329


>gi|256371280|ref|YP_003109104.1| hypothetical protein Afer_0463 [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256007864|gb|ACU53431.1| hypothetical protein Afer_0463 [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 504

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 106/367 (28%), Gaps = 47/367 (12%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  +   V   GE+           P +G I +  V  G ++  G  L      E    +
Sbjct: 109 LSSLSSEVVDPGEVSLSF-------PAAGTISQLAVHPGERVASGQVLA----TEVVPGL 157

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              + + +       +E SAL  L  +   +  A      Q                   
Sbjct: 158 SETRHADQAAIAADTSEVSALQALIAQMSSVTSANAGVVAQAAQAEVAAARQALTSDESQ 217

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKS-SLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           ++SV       +   +S+          + S +    S          +   + A  +  
Sbjct: 218 LASVQAQGAATVAAAQSLLGADQAAAVAACSGVGPTASPPTAAQVACADAQHRVAADELA 277

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L Q +     +   ++  I   +  L        E++   +  L  +   L   Q   A 
Sbjct: 278 LAQAKASSQSAVDGVQSLIAADQRALSDAEAQASESDGVSSTQLAALKVSLVAAQAQLAR 337

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYN-----QSFSSSNY-----------AQQSQPL- 318
           +  +L    +T   +T+ +PIAGT+V       ++ S+S                   L 
Sbjct: 338 DQGELNAAAQTAATQTLRAPIAGTVVSVDGAVGETVSASGVGDAVPSGSSVAVTPGFTLF 397

Query: 319 ---------------MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                          + ++     TY+   V    I  V  G   T  F   +       
Sbjct: 398 PSTQTESSQPVASTPVVVIKGHAPTYLETLVPESVIGKVHLGDQVT--FTPSSQGI-GVV 454

Query: 364 KAIIEKI 370
             ++E+I
Sbjct: 455 HGVVEQI 461


>gi|125718284|ref|YP_001035417.1| hypothetical protein SSA_1473 [Streptococcus sanguinis SK36]
 gi|125498201|gb|ABN44867.1| Hypothetical protein SSA_1473 [Streptococcus sanguinis SK36]
          Length = 63

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 22/62 (35%)

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P  G I            +   P+  +VP        A+V+ K    ++KG  A ++   
Sbjct: 2   PSTGQIASLIVSHIGQTVRAENPVATLVPSDSELIFEAQVSDKDRADIQKGMKAVIKLQA 61

Query: 355 YA 356
           Y 
Sbjct: 62  YP 63


>gi|12620094|gb|AAG60555.1|AF250767_3 ElsF [uncultured bacterium pCosFS1]
          Length = 170

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 18/167 (10%)

Query: 254 EFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           + A YLK    +++E+ +   A   + L   +      T++SP AGT++  ++       
Sbjct: 7   KLAQYLKGNRPQEIEEAKANLAQSEAALAQAQLNLHDTTLVSPSAGTVLT-RAVEPGTML 65

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE-KKFKAIIEKID 371
                +  +   ++  ++RA V    +     G    +    Y D R+ K +   I  + 
Sbjct: 66  NAGGTVFTLS-LTRPVWVRAYVNEVNLGKATPGTELEI----YTDSRQDKPYHGKIGFVS 120

Query: 372 PII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           P       S +  +L+T   Y + + +TD   +     LR G P  V
Sbjct: 121 PTAEFTPKSVETPDLRTDLVYRLRVIVTDADDA-----LRQGMPVTV 162


>gi|222099255|ref|YP_002533823.1| Efflux transporter, RND family, MFP subunit precursor [Thermotoga
           neapolitana DSM 4359]
 gi|221571645|gb|ACM22457.1| Efflux transporter, RND family, MFP subunit precursor [Thermotoga
           neapolitana DSM 4359]
          Length = 335

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 19/181 (10%)

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT--ILEKTREQKTILSPIAGTIV 301
           +      A ++  +Y  E    L  N +T   E+++L   + +K  E   + SP+ G + 
Sbjct: 88  VQSGQRIAKIDDTDYQIEYLSALN-NYKTSPTEINRLNLEVAKKNLENTIVTSPVNGVVQ 146

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                S  +       +++IV  +    +   +    +++VK+G  A   F         
Sbjct: 147 SVDV-SEGDRVSVGTAIVEIV-ETDTLRVEGSIDEYDLKNVKEGMKAVFTFEQLGLT--- 201

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL-RNGFPAEVLFTAKNT 420
                +++I P+               V +   + +F     E+   G    V    +  
Sbjct: 202 -LTGKVKRISPVAETSGG---------VTVIPVEFSFDQTPPEIVIPGLTCNVEIIIREA 251

Query: 421 T 421
           T
Sbjct: 252 T 252



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 21/52 (40%), Gaps = 2/52 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
            +V   G++  +     + S  SG + +  V+ G  +  G  +   +D +  
Sbjct: 54  ETVEIVGQVTADTRS--VASKVSGDVLELYVQEGDYVQSGQRIAKIDDTDYQ 103


>gi|124010219|ref|ZP_01694874.1| efflux transporter, RND family, MFP subunit [Microscilla marina
           ATCC 23134]
 gi|123983711|gb|EAY24143.1| efflux transporter, RND family, MFP subunit [Microscilla marina
           ATCC 23134]
          Length = 371

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 91/289 (31%), Gaps = 46/289 (15%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                + V +  + +   + +    +++      + L+ + +  +A L    K+L     
Sbjct: 84  LFQLSNDVQSARLDNALVNYRDAKEKLQPSSPQLMQLQIQIAQAKAQLKLDAKNLERYTQ 143

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E NAVSQ + +Q +     +   +        N+   +                    
Sbjct: 144 LVETNAVSQLEYDQVKLKYDAAKNNVALLEKSLDNLKSSL-------------------- 183

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                Q    +  S+L I  +      + +   G ++           ++ Q L KI   
Sbjct: 184 -----QLQLENAQSQLKIQRENHNDYYLKA-TTGGVLLKLLKKEGELVRRGQHLAKI--G 235

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           S    I+  V  + I  VK G  A +        + + F A + K+ P    ++ +   +
Sbjct: 236 SGREVIKLYVAEEDIGRVKVGQMAKISL---NTHKNEVFDAKVTKVYPAFDDKEQSFLVE 292

Query: 385 EYY----EVILKITDLA------FSDNNIELRNGFPAEVLFTAKNTTLA 423
             +     V+L  T L          + + +    PA       +  + 
Sbjct: 293 AVFLSKPTVLLAGTQLQANIVVNKKQHGLTI----PA-AFLQKGDRVIL 336



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 54/162 (33%), Gaps = 6/162 (3%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +V +SG I  +   +   +    I+K    + G ++    PL    +   +  +D   V+
Sbjct: 44  AVFASGHIAKDHEYLVAANTEGYIVKS-FAQEGDKVTANMPLFQLSNDVQSARLDNALVN 102

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            ++ +  +      L  L  +    +   +   + L  +     +       Y    +  
Sbjct: 103 YRDAKEKLQPSSPQLMQLQIQIAQAKAQLKLDAKNLERYTQLVETNAVSQLEYDQVKLKY 162

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                     ++ L    L+N  S L+  L + Q  L + + 
Sbjct: 163 D-----AAKNNVALLEKSLDNLKSSLQLQLENAQSQLKIQRE 199


>gi|160873757|ref|YP_001553073.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS195]
 gi|160859279|gb|ABX47813.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS195]
 gi|315265982|gb|ADT92835.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS678]
          Length = 406

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 77/241 (31%), Gaps = 30/241 (12%)

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL---- 253
           D+ + +N+ + + ++Q D   Q+  + ++   L+    + +     I     E       
Sbjct: 75  DVNVGQNIKQGDLIAQIDNLTQQNALKEAQASLQSIDAQYRAKQAQIKVAQSEYARNKKM 134

Query: 254 ------------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                          + L     +L++        +  +   +      TI SPI GT++
Sbjct: 135 LVNGAASVSDFDSAESILAVYLAELDELSAEKDKAIISVDSAKLNLGYTTIRSPIDGTVI 194

Query: 302 YNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           Y            +Q    ++++     L  I+A+V+   I +V  G             
Sbjct: 195 YVSV-EEGQTVNNNQGTPSIIELA-QLDLMTIKAQVSEADIINVSAGQAVYFSILGATAK 252

Query: 359 REKKFKAIIE----KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           + +     IE     +    S          YY  +  +      +   +LR G  A+V 
Sbjct: 253 KYRGVLRTIEPGPTLLSGDDSSLLIGDDEAIYYNALFDV-----ENPGNQLRFGMTAQVS 307

Query: 415 F 415
            
Sbjct: 308 I 308



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 56/140 (40%), Gaps = 3/140 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE  V ++G +     +V + +  SG+I+   V  G  I QG  +   +++   + + 
Sbjct: 43  GNIEKVVLTNGVLYPS-KLVSVGAQVSGLIETMDVNVGQNIKQGDLIAQIDNLTQQNALK 101

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S++++      +++ +    ++Y   +K   +    + DF      +   V+   +
Sbjct: 102 EAQASLQSIDAQYRAKQAQIKVAQSEYARNKKMLVNGAASVSDFDSA--ESILAVYLAEL 159

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
             +       +  + S  LN
Sbjct: 160 DELSAEKDKAIISVDSAKLN 179


>gi|89899194|ref|YP_521665.1| secretion protein HlyD [Rhodoferax ferrireducens T118]
 gi|89343931|gb|ABD68134.1| secretion protein HlyD [Rhodoferax ferrireducens T118]
          Length = 400

 Score = 56.9 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 61/156 (39%), Gaps = 5/156 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK- 104
           ++G ++   +V +IKS  + ++ K  +++G  +  G  L T +       +   +  +  
Sbjct: 67  ATGTVMALASV-DIKSQVTSVVSKIHIQDGQFVKAGELLFTLDSRTDEANLAKARAQLAK 125

Query: 105 --NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
              LR     + +    L ++  + + A ++ + QL        +  + +    ++  Y 
Sbjct: 126 DSALRADAQRQLARAQQLYSQNFISQGAVDTAQAQLDSMAASVVADQAAIEAARVAVSYA 185

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +       R+  +N        + L +L++  Q D
Sbjct: 186 RISAPNAG-RAGAVNVSQGSVVQANLTSLVTITQLD 220


>gi|322490069|emb|CBZ25331.1| putative kinesin [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 1052

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 68/206 (33%), Gaps = 10/206 (4%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES------REEQLLDFLGKY 145
           +TD I   +  +  L+  +  +++    L ++   L+  +++      R    L+   + 
Sbjct: 516 STDEIAALRRLVAELQERLAAKETECADLADRLSALQAKYDADTCASQRVRSELEAQLEE 575

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               S+  +  ++ V   L+    ++  +   +  L  +   LRA +      +   + +
Sbjct: 576 LRNRSEERDEQLAMVEAQLEESERQVSELTKRQEQLMREEETLRATVERLTVAMESTEEM 635

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            ++ +    D  +  +       +  E + +    L    E   E + + A+        
Sbjct: 636 LQETSAKLADTEETLQETSAKLADTEETLQQTSAKLADTEETLQETSAKLAD----TEET 691

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT 291
           L++     AD    L           
Sbjct: 692 LQETSAKLADTEETLQQTSAKLADTE 717



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 61/188 (32%), Gaps = 8/188 (4%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +     +   +S  D           A      +L + L    + C+ + +  +S++   
Sbjct: 496 RGYETRLRALQSESDATLAASTDEIAALRRLVAELQERLAAKETECADLAD-RLSALQAK 554

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                   + +   R +LE +   LR       + L M++   E++    ++L +++  +
Sbjct: 555 YDADTCASQRV---RSELEAQLEELRNRSEERDEQLAMVEAQLEESERQVSELTKRQEQL 611

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +    LR  +      +    E+  E + + A+        L++     AD    L   
Sbjct: 612 MREEETLRATVERLTVAMESTEEMLQETSAKLAD----TEETLQETSAKLADTEETLQQT 667

Query: 284 EKTREQKT 291
                   
Sbjct: 668 SAKLADTE 675



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/213 (9%), Positives = 61/213 (28%), Gaps = 7/213 (3%)

Query: 86  TFEDIETTDLIDLKKVSI--KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
               ++     D          L   ++  ++  +  + +  ++E   E  E Q+ +   
Sbjct: 547 RLSALQAKYDADTCASQRVRSELEAQLEELRNRSEERDEQLAMVEAQLEESERQVSELTK 606

Query: 144 KYHSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           +      +       +  +  +++     ++       D E       A L+  ++ L  
Sbjct: 607 RQEQLMREEETLRATVERLTVAMESTEEMLQETSAKLADTEETLQETSAKLADTEETLQQ 666

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY---DEANLEFANY 258
                     +  + + +     ++  E    + + +  L+  +      +E   E +  
Sbjct: 667 TSAKLADTEETLQETSAKLADTEETLQETSAKLADTEETLQQTSAKLADTEETLQETSAK 726

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           L +    L++     AD    L           
Sbjct: 727 LADTEETLQETSAKLADTEETLQETSAKLADTE 759



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 58/201 (28%), Gaps = 9/201 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +T+  +   + +++     +   +  L   + K    E+  +    +L D       T +
Sbjct: 708 QTSAKLADTEETLQETSAKLADTEETLQETSAKLADTEETLQETSAKLADTEETLQETSA 767

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K+ +        +L+    ++        +   K +     L      L   +   ++ +
Sbjct: 768 KLADT-----EETLQQTSAKLADTEETLQETSAKLADTEETLQETSAKLADTEETLQQTS 822

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
               D  +  +       +  E + E    L    E   E + + A+        L++  
Sbjct: 823 AKLADTEETLQETSAKLADTEETLQETSAKLADTEETLQETSTKLAD----TEETLQETS 878

Query: 271 RTFADEMSKLTILEKTREQKT 291
              AD    L           
Sbjct: 879 AKLADTEETLQETSAKLADTE 899



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 60/206 (29%), Gaps = 5/206 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +T+  +   + +++     +   +  L   + K    E+  +    +L D       T +
Sbjct: 666 QTSAKLADTEETLQETSAKLADTEETLQETSAKLADTEETLQQTSAKLADTEETLQETSA 725

Query: 151 KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
           K+      +      L      ++       D E       A L+  ++ L         
Sbjct: 726 KLADTEETLQETSAKLADTEETLQETSAKLADTEETLQETSAKLADTEETLQQTSAKLAD 785

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY---DEANLEFANYLKEISRD 265
              +  + + +     ++  E    + + +  L+  +      +E   E +  L +    
Sbjct: 786 TEETLQETSAKLADTEETLQETSAKLADTEETLQQTSAKLADTEETLQETSAKLADTEET 845

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT 291
           L++     AD    L           
Sbjct: 846 LQETSAKLADTEETLQETSTKLADTE 871



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 58/201 (28%), Gaps = 9/201 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           ET+  +   + +++     +   +  L   + K    E+  +    +L D       T +
Sbjct: 638 ETSAKLADTEETLQETSAKLADTEETLQQTSAKLADTEETLQETSAKLADTEETLQETSA 697

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K+ +        +L+    ++        +   K +     L      L   +   ++ +
Sbjct: 698 KLADT-----EETLQQTSAKLADTEETLQETSAKLADTEETLQETSAKLADTEETLQETS 752

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
               D  +  +       +  E + +    L    E   E + + A+        L++  
Sbjct: 753 AKLADTEETLQETSAKLADTEETLQQTSAKLADTEETLQETSAKLAD----TEETLQETS 808

Query: 271 RTFADEMSKLTILEKTREQKT 291
              AD    L           
Sbjct: 809 AKLADTEETLQQTSAKLADTE 829


>gi|306844653|ref|ZP_07477238.1| efflux transporter, RND family, MFP subunit [Brucella sp. BO1]
 gi|306274825|gb|EFM56595.1| efflux transporter, RND family, MFP subunit [Brucella sp. BO1]
          Length = 408

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 15/210 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q D  + + +   + L L++    ++  L     +      +    L     +++    
Sbjct: 127 AQLDNLKAQLLSKDAQLTLKKLNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNA 186

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
               + ++L   +      +I SP+ GT+V  Q+          Q    IV  + L    
Sbjct: 187 QIRQQEAQLASDKVDLGYTSIYSPMEGTVVD-QAAKEGETLNAVQSAPTIVTVADLKVMT 245

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A+V+   I  +K G      F        K+F   + +I P  +  +N +    YY +
Sbjct: 246 VEAQVSEADISKLKPGMPVY--FTLLGQPD-KRFTGTLRQIKPTPATDNNVVL---YYAL 299

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                     +   EL     A+V F    
Sbjct: 300 F------DVPNPTGELMIDMSAQVYFVLGE 323



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 67/193 (34%), Gaps = 29/193 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW-------------SILLP------IEISVSSS 47
            + ++      +    L    II    W             S L        IE ++++ 
Sbjct: 15  ASARKRAKGKRRWWLWLPAAAIIIGAGWYFYGSYKADGEKSSYLAETVTRGDIENAITAV 74

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G + +    V + +  SG +K  +VE G  + QG  +   +       +++    + NL+
Sbjct: 75  GTL-SALRSVNVGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIAGAQLDNLK 133

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             + ++ + L         L+K   +R++ LL   G   +T  +  N  +      +K  
Sbjct: 134 AQLLSKDAQL--------TLKKLNAARQKSLLATRGVSQATVDQA-NADLLMAEAEVKAL 184

Query: 168 LTRMRSIYLNRLD 180
             ++R        
Sbjct: 185 NAQIRQQEAQLAS 197


>gi|291229331|ref|XP_002734629.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 3307

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 8/201 (3%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL-DFLGKYHSTCSK 151
             + ++ ++  I+ L   + TEK+    L  + D  +         L  D +    +   K
Sbjct: 1062 NEELEEQEDKIEELLHQLKTEKTEKSKLQERLDEADNRLAELTLSLQGDSISDVTANTLK 1121

Query: 152  VF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT----MMKNL 205
            +      +  V + LK  L  +  +   +  L+ +       +   QKDL     ++++L
Sbjct: 1122 LQSVERKLGEVEKKLKDALEDLDQVLAEKEKLKKQLDESVEQIEKLQKDLGEKDLLLEDL 1181

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
              K    + +  + +R V K   +      +       I++L DE   E    +KE    
Sbjct: 1182 NRKMNAKEEEYEKLKRDVEKCYGDKGSLKEQILQHTLEISQLKDELQ-ESKRTIKEQEEQ 1240

Query: 266  LEQNQRTFADEMSKLTILEKT 286
            L Q +    D   K+  LE  
Sbjct: 1241 LAQKKLELEDAKEKVKQLEDD 1261



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 75/207 (36%), Gaps = 7/207 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD-FLGKYHSTC 149
            E +      ++ I++L   ++  +  L        + E+ FE R  +L +    +  +  
Sbjct: 974  ERSRNRQDSEIKIEHLTSKLEEARQRLKESERDCILNEERFEKRFLRLQNKGQSEKETLE 1033

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             K+ +          + +       +    +LE +   +  LL   + + T    L E+ 
Sbjct: 1034 KKLADAEEKVASLGQEKECKDRNESHKLNEELEEQEDKIEELLHQLKTEKTEKSKLQERL 1093

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              + N L +          +   ++      L+ +     E   +  + L+++ + L + 
Sbjct: 1094 DEADNRLAEL---TLSLQGDSISDVTANTLKLQSVERKLGEVEKKLKDALEDLDQVLAEK 1150

Query: 270  Q---RTFADEMSKLTILEKTREQKTIL 293
            +   +   + + ++  L+K   +K +L
Sbjct: 1151 EKLKKQLDESVEQIEKLQKDLGEKDLL 1177



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 77/207 (37%), Gaps = 12/207 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +    T  +   +  +  +   +      LD +  + + L+K  +   EQ+         
Sbjct: 1114 DVTANTLKLQSVERKLGEVEKKLKDALEDLDQVLAEKEKLKKQLDESVEQIEKLQKDLGE 1173

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                  +  +  + R +  K      +  +          L+  +  H  +++ +K+  +
Sbjct: 1174 K-----DLLLEDLNRKMNAKEEEYEKLKRDVEKCYGDKGSLKEQILQHTLEISQLKDELQ 1228

Query: 208  KNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            +   S+  + +QE  + +  LEL   +E + + ++    +   +DE        L E   
Sbjct: 1229 E---SKRTIKEQEEQLAQKKLELEDAKEKVKQLEDDFVKLQNQHDEEISSKLQELDERKA 1285

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
             + ++++  A+ +++   LEKT+    
Sbjct: 1286 KINESEKKLAE-LAQTVELEKTKVSTQ 1311


>gi|32476774|ref|NP_869768.1| acriflavin resistance protein A [Rhodopirellula baltica SH 1]
 gi|32447320|emb|CAD77146.1| acriflavine resistance protein A [Precursor] [Rhodopirellula
           baltica SH 1]
          Length = 467

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 54/181 (29%), Gaps = 23/181 (12%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E Q+++          + F   +++    L+   ++ +                 A L+ 
Sbjct: 89  EGQIVEKNDLLFIIDPRPFEAELAAAQARLQQSESQFKQAKAMTEVARANLLQSEAQLNL 148

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
                   +NL E+NA SQ++L+ +E    K+  ++        +    I     E  L 
Sbjct: 149 ADVRYKRTQNLVERNASSQDELDDREAEFLKAKADIEGVRASLNSSEAAIATAQAEIELA 208

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A                       +   E   +   I +PI G I   +  +  N    
Sbjct: 209 KAG----------------------VETAELNLQYTRIRAPITGRISR-KYVTEGNLIAG 245

Query: 315 S 315
            
Sbjct: 246 G 246



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/188 (11%), Positives = 56/188 (29%), Gaps = 13/188 (6%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++VE+++   G ++    + G  + +   L   +           +  +   +  +   +
Sbjct: 70  DLVEVRARVGGYLQSVHFDEGQIVEKNDLLFIIDPRPF-------EAELAAAQARLQQSE 122

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           S         +V        E QL   L       ++      +S    L  +       
Sbjct: 123 SQFKQAKAMTEVARANLLQSEAQL--NLADVRYKRTQNLVERNASSQDELDDREAEFLKA 180

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
             +   +    +   A +++ Q ++     L +    +     Q  RI    T  +    
Sbjct: 181 KADIEGVRASLNSSEAAIATAQAEI----ELAKAGVETAELNLQYTRIRAPITGRISRKY 236

Query: 235 HEQKNMLR 242
             + N++ 
Sbjct: 237 VTEGNLIA 244


>gi|305667470|ref|YP_003863757.1| hypothetical protein FB2170_14523 [Maribacter sp. HTCC2170]
 gi|88709518|gb|EAR01751.1| hypothetical protein FB2170_14523 [Maribacter sp. HTCC2170]
          Length = 348

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 84/273 (30%), Gaps = 47/273 (17%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN--LFEK--------NAVSQNDLNQQER 221
           ++  LNR + +    L +A  +     L  ++   L  K        N   Q+ L +QE 
Sbjct: 67  KTPALNRENAKINLQLAQAEYNGSATVLEGLQKEILTAKLKLHNDSINFTRQDRLWKQE- 125

Query: 222 IVYKSTLELRENIHEQK-NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           I  K+  +LR+  +E   N L+ +   +D    E  N +K+ +   +    T  D     
Sbjct: 126 IGSKAEYDLRKLNYELSFNNLKVLQNNFDRTKNELNNRVKQANNTYQAAVVTTKDF---- 181

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                     TI S I G +      +        QPL  I        I   V    I 
Sbjct: 182 ----------TITSKINGRVYAI-YNNIGEIITTMQPLASIGSTDDFL-IELLVDEVDIV 229

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            +K      +    Y     + F+  I KI P   ++    + + ++            +
Sbjct: 230 KLKTNQKVVITLDAYG---GQVFEGKIFKIYPKKDERTQTFKVEAFF-----------DN 275

Query: 401 NNIELRNGFPAEVLFTAKNT-----TLAQEIIH 428
               L  G   E                  ++ 
Sbjct: 276 APKTLYPGLAGEANIIISKKENILTIPLAYLMK 308


>gi|330939757|gb|EGH43030.1| secretion protein HlyD [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 306

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/319 (11%), Positives = 92/319 (28%), Gaps = 76/319 (23%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PIE + ++      +     I    SG + +  V++   +  G  L+  +D        
Sbjct: 64  SPIESTENAQ----VKGQTTLIGPQLSGYVYEVPVQDFQFVKAGDLLVRLDD-------R 112

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + +  +      +  +K++L     +    E     R+ +L + + +   + +       
Sbjct: 113 IYRQRLDQAIAQLAVQKASLANNLQQRRSAEATIGQRQAELQNSIAQSRKSAA------- 165

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                                                   DL   + L    +VS+++L 
Sbjct: 166 ----------------------------------------DLRRNQALVTDGSVSKSEL- 184

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                V ++          +   +  I              L+ +  +    + + A+  
Sbjct: 185 ----DVTRAADAQANAAVAEARAVLQIA----------REDLQTVIVNRGSLEASVANAQ 230

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + + +     +   I++P  G +          Y      LM +VP  +     A +   
Sbjct: 231 AAIELARIDMDNTRIVAPRDGQLGQIGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKET 287

Query: 338 QIQHVKKGYTATVRFPHYA 356
           Q+ +V+ G   +       
Sbjct: 288 QMANVRLGQPVSFTVDALD 306


>gi|327405713|ref|YP_004346551.1| RND family efflux transporter MFP subunit [Fluviicola taffensis DSM
           16823]
 gi|327321221|gb|AEA45713.1| efflux transporter, RND family, MFP subunit [Fluviicola taffensis
           DSM 16823]
          Length = 364

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 63/185 (34%), Gaps = 22/185 (11%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEIS------RDLEQNQRTFADEMSKLTILEKTRE 288
            + +  L       D+A  +   Y + ++      + +E+ + T     +K+  L+ + +
Sbjct: 116 EQIRIDLSLAKTTLDKAKSDLEKYERMVASGAVNKQQVEEMRMTMNTADAKVKTLQHSLK 175

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             TI+SPI+G +         +Y      +  IV   K   +  K+   Q+  V+ G + 
Sbjct: 176 LTTIVSPISGVVSNVAI-EKGSYLAPGTAIADIV-DIKSLKMSVKLLDAQVVRVQAGQSV 233

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            +    YA+         +  + P             +            +     L++G
Sbjct: 234 QIVPDLYANST---ITGKVASVSPQADGSKKFDTEIRF-----------VNPVKTPLKSG 279

Query: 409 FPAEV 413
              +V
Sbjct: 280 MTGKV 284



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 2/82 (2%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G  + +  +  + S  SG ++   +ENG  + +G  + T +  +    + L K ++   +
Sbjct: 75  GNFVPDHQLSFV-SEASGRVRSLNIENGDYVNEGKVIATLDSEQIRIDLSLAKTTLDKAK 133

Query: 108 CHID-TEKSALDFLNNKYDVLE 128
             ++  E+       NK  V E
Sbjct: 134 SDLEKYERMVASGAVNKQQVEE 155


>gi|327404544|ref|YP_004345382.1| RND family efflux transporter MFP subunit [Fluviicola taffensis DSM
           16823]
 gi|327320052|gb|AEA44544.1| efflux transporter, RND family, MFP subunit [Fluviicola taffensis
           DSM 16823]
          Length = 347

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK------- 114
              G+I+K  V  G ++ +G  L T +       +   K+ ++  +  ++  K       
Sbjct: 67  LSGGVIQKLFVREGDKVQKGQLLATLDLTLVKATVSQAKLGLEKSKRDLERAKNLQKEGF 126

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           + L+ + N    ++ A E  +  L +         S  F     +    L
Sbjct: 127 ATLEQMQNAQTAVDVAEEQLQSALFNLKYAEIRAVSNGFILRKMANQGQL 176



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 51/170 (30%), Gaps = 3/170 (1%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +K  V + D  Q+ +++    L L +    Q  +    ++   E               +
Sbjct: 73  QKLFVREGDKVQKGQLLATLDLTLVKATVSQAKLGLEKSKRDLERAKNLQKEGFATLEQM 132

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-VPHS 325
           +  Q        +L       +   I +   G I+   +           P+ +     S
Sbjct: 133 QNAQTAVDVAEEQLQSALFNLKYAEIRAVSNGFILRKMAN-QGQLVSSGTPVFQTNGAGS 191

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFKAIIEKIDPII 374
               ++  V+ +Q   +K G  A +    +     +       E IDP  
Sbjct: 192 SSFKLKVGVSDRQWSQIKIGDEAEIESDVFRNQTVKAVVSRKSESIDPFS 241


>gi|319787171|ref|YP_004146646.1| efflux transporter RND family, MFP subunit [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465683|gb|ADV27415.1| efflux transporter, RND family, MFP subunit [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 421

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 82/282 (29%), Gaps = 26/282 (9%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA--LLSSHQKDLTMMKNL 205
              +V       V   +   +   R +  +R++  +   +LRA  + +   +    ++ L
Sbjct: 51  ATGRVAALSRVQVGAEISGLVLERRVMEGDRVEPGDVLVVLRAVDIEARRNEARAALETL 110

Query: 206 FE-KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            +     +Q    Q +  + ++  E +    E         E  ++A            +
Sbjct: 111 RKADRPDAQARYRQAQADLAQAEREAQRR-RELGERQLVSRESVEQAAQAVVAARAAAGQ 169

Query: 265 DLEQNQRTF------ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
                +         A  + +L   E   E+  I S +AGT++  +     +     Q L
Sbjct: 170 ARVAAESVASGGALEAQVIERLRAAEADLERAVIRSTVAGTVL-VRQVEPGDAVTPGQVL 228

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           ++I        I   +  K +  ++ G  AT     +       F A +  I P I    
Sbjct: 229 LEIA-ADAPGEILLPLDEKNLSLLEVGQPATCVTDAFPGR---PFAATVHHIAPGIDPAR 284

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +       + +  +      +                   
Sbjct: 285 GTVDV----RLRIDPSADFVRQD-------MTVTATLLTGRR 315



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 57/162 (35%), Gaps = 2/162 (1%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
              P+  +V ++G +     V  + +  SG++ + +V  G ++  G  L+    ++    
Sbjct: 41  AAGPLVQNVVATGRVAALSRVQ-VGAEISGLVLERRVMEGDRVEPGDVLVVLRAVDIEAR 99

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            +  + +++ LR   D   +   +   + D+ +   E++  + L           +    
Sbjct: 100 RNEARAALETLR-KADRPDAQARYRQAQADLAQAEREAQRRRELGERQLVSRESVEQAAQ 158

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            + +   +         S+             LRA  +  ++
Sbjct: 159 AVVAARAAAGQARVAAESVASGGALEAQVIERLRAAEADLER 200


>gi|298387651|ref|ZP_06997202.1| periplasmic component of efflux system [Bacteroides sp. 1_1_14]
 gi|298259507|gb|EFI02380.1| periplasmic component of efflux system [Bacteroides sp. 1_1_14]
          Length = 409

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 73/213 (34%), Gaps = 12/213 (5%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHE---QKNMLRHINELYDEANLEFANYLKEISRD 265
             +++ D    +  +            E   QK        L+D++ +   +Y ++   +
Sbjct: 86  QLIAEMDRVTLQSELASQQATYDGAKAEFEYQKKNYERSKGLHDKSLISDTDY-EQALYN 144

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIV 322
            ++ +  F    + L   E+     TI SPI G ++  +   +            L  I 
Sbjct: 145 YQKAKSAFDSSKASLAKAERNLSYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIA 203

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  + A V    I  +++G  A+     Y +     F  ++ +I  +     ++  
Sbjct: 204 ADLTQMQVVADVDEADIGGIEEGQRASFTVDAYPND---VFDGVVTQI-RLGDASSSSSA 259

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +     V+     ++  + +++L+    A V  
Sbjct: 260 SSSTSTVVTYEVVISAPNPDLKLKPRLTANVTI 292



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 42/105 (40%), Gaps = 1/105 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII K   +  S + +G  +   + +     +  +
Sbjct: 45  ISNSVTATGTIEPVIEV-EVGTQVSGIIDKIYADYNSVVTKGQLIAEMDRVTLQSELASQ 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           + +    +   + +K   +     +D    +    E+ L ++   
Sbjct: 104 QATYDGAKAEFEYQKKNYERSKGLHDKSLISDTDYEQALYNYQKA 148


>gi|281601080|gb|ADA74064.1| putative membrane protein [Shigella flexneri 2002017]
          Length = 299

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 27/220 (12%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S +     +  +   +   +S    +L +     +   V+  +L            EL
Sbjct: 44  MQSPWTRDGKIRAEQVSITPQVSGRIVELNIK----DNQLVNAGELLLTIDKTPFQIAEL 99

Query: 231 RENIHEQKNMLRHINELYDEANLE--------FANYLKEISRDLEQNQRTFADEMSKLTI 282
                +       + +  +EAN          FA  L   + +++  Q +     + L  
Sbjct: 100 NAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIFAEELDTANLNVKAMQASVNAAQATLKQ 158

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQ 338
            +    Q  I +P++G +    +    +YA   +PL  +V       I      K+    
Sbjct: 159 TQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR--- 214

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             H+++G  A +          K  +  +  I   I  Q 
Sbjct: 215 --HIREGAPAQITL----YSDNKTLQGHVSSIGRAIYDQS 248



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 15  MSIKTIKYFSTIIVAIVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 70

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 71  ELNIKDNQLVNAGELLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 130

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 131 FAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 170


>gi|260174993|ref|ZP_05761405.1| hypothetical protein BacD2_24262 [Bacteroides sp. D2]
 gi|315923226|ref|ZP_07919466.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313697101|gb|EFS33936.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 416

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 107/314 (34%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTCSK 151
            + I + +V   N   ++D E      L  K +  E     R   +    L +  +    
Sbjct: 45  AENIQIAEVKESNFMEYVDVEGLIQPILTIKINTREAGSVERIVGEEGSLLQQGDTILIL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + ++         RM +     +++E KS  L+    ++  +L  +K        
Sbjct: 105 SNPDLLRNIEDQRDEWEKRMITYQEQEIEMEQKSLNLKQQALTNNYELERLK-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        + +  + E +   +  N    + +L   + +  I ++L +N R
Sbjct: 157 -KSIALDREEFQMGVKSKAQLLVAEDEYSYKQKNAALQQESLRHDSTVTMIRKELIRNDR 215

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  K     +      + +P+ G + + +  +        + + +I        I 
Sbjct: 216 ER--ERKKYERTRERLNSLVVTAPLKGQLSFVKV-TPGQQVSSGESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRF--PHYADIREKKFKAIIEKI-DPIIS---QQDNNLQTQE 385
             ++   I  +  G  ATV +    Y     K    + +++ D  +       +N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATVNYQGNKYPLKISKVVPEVKDRVFDVDLVFTGDMPDNVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEQA 345


>gi|153808108|ref|ZP_01960776.1| hypothetical protein BACCAC_02394 [Bacteroides caccae ATCC 43185]
 gi|149129011|gb|EDM20227.1| hypothetical protein BACCAC_02394 [Bacteroides caccae ATCC 43185]
          Length = 415

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 10/182 (5%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            I  +  DL  + + LR    S +++   +K   E+  ++++ L +Q R    S L   +
Sbjct: 112 GIMQSEADLAYQENELRNTRISMEQERLRLKQ--ERIGLNKDRLVKQRRYEQYSRLIKEQ 169

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE-----MSKLTILEKTR 287
            I E+   L        +  L+  +          ++Q    DE        L ++ +  
Sbjct: 170 LIAEEDYRLAKEEYDAAKEQLDVIDERIRQDNIFRESQVNSLDENIRNMKQSLALVRERI 229

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           E   + +PI G +    +          + + +I+       ++A++    ++ V  G  
Sbjct: 230 ENLKVKAPIDGQVGNLDA-QIGQSIAAGEHIGQIITSD--LKVQAQIDEHYVERVVPGLP 286

Query: 348 AT 349
           A 
Sbjct: 287 AD 288



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 79/215 (36%), Gaps = 21/215 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G+++  + ++ + +   G +++   E G+ +  G  +L   +       +++   +
Sbjct: 62  IRVIGQVMP-NRIIYMDAVEGGRVEERLKEEGAMVKAGDVILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--KVFN 154
             ++  ++N R  ++ E+  L       +      + R EQ    + +        ++  
Sbjct: 121 AYQENELRNTRISMEQERLRLKQERIGLNKDRLVKQRRYEQYSRLIKEQLIAEEDYRLAK 180

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +    L +   R+R   + R   E++ + L   + + ++ L +++         + 
Sbjct: 181 EEYDAAKEQLDVIDERIRQDNIFR---ESQVNSLDENIRNMKQSLALVRE--------RI 229

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           +  + +  +      L   I +      HI ++  
Sbjct: 230 ENLKVKAPIDGQVGNLDAQIGQSIAAGEHIGQIIT 264


>gi|89256944|ref|YP_514306.1| RND efflux transporter [Francisella tularensis subsp. holarctica
           LVS]
 gi|115315308|ref|YP_764031.1| RND efflux transporter [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156503134|ref|YP_001429199.1| MFP (membrane fusion protein) subunit, RND family protein
           [Francisella tularensis subsp. holarctica FTNF002-00]
 gi|167010009|ref|ZP_02274940.1| efflux protein, RND family, MFP subunit [Francisella tularensis
           subsp. holarctica FSC200]
 gi|290954005|ref|ZP_06558626.1| MFP (membrane fusion protein) subunit, RND family protein
           [Francisella tularensis subsp. holarctica URFT1]
 gi|295312624|ref|ZP_06803376.1| MFP (membrane fusion protein) subunit, RND family protein
           [Francisella tularensis subsp. holarctica URFT1]
 gi|89144775|emb|CAJ80110.1| Efflux protein, RND family, MFP subunit [Francisella tularensis
           subsp. holarctica LVS]
 gi|115130207|gb|ABI83394.1| RND family efflux transporter, MFP subunit [Francisella tularensis
           subsp. holarctica OSU18]
 gi|156253737|gb|ABU62243.1| MFP (membrane fusion protein) subunit, RND family protein
           [Francisella tularensis subsp. holarctica FTNF002-00]
          Length = 457

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 69/202 (34%), Gaps = 26/202 (12%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI---------TWSILLPIEISVSSS-------GEILNE 53
           K+    ++   TL+   GI G             +  +P  ++V+SS        +++N 
Sbjct: 65  KKTASIAIVVATLILFGGIFGFAEFIQSMIKKGMAAYVPQPVAVTSSVVEKTDWKQVINT 124

Query: 54  -DNVVEIKS-----PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
                 ++S        GI+ +   ++G ++ +G  L   +  +    ++    ++K  +
Sbjct: 125 IGEAQAVQSTAISSQSGGIVSEIHFKSGQEVKKGDLLFKLDTSQLKANLEEALSNLKLAK 184

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                 K   + L  +    +++ +      L  L +  +  S++    + + +      
Sbjct: 185 ----ITKDRYNKLVEQKATSKESADKANADYLSALAQVQNIESQIGFKEVRAPFDGKIGI 240

Query: 168 LTRMRSIYLNRLDLENKSSLLR 189
                  Y N  D     + + 
Sbjct: 241 RNISLGQYFNNGDNAATLTTID 262



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 71/202 (35%), Gaps = 25/202 (12%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S  ++ + + +    T +L+ N+ E  + L  + ++  +   +            ++   
Sbjct: 151 SGQEVKKGDLLFKLDTSQLKANLEEALSNL-KLAKITKDRYNKLVEQKATSKESADKANA 209

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLT 328
            +   ++++  +E     K + +P  G I   ++ S   Y         L  I       
Sbjct: 210 DYLSALAQVQNIESQIGFKEVRAPFDGKI-GIRNISLGQYFNNGDNAATLTTI----DPI 264

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQEYY 387
           +I   V   ++  +  G    + F  Y+D    + F   I  I+  I+  + ++  Q  Y
Sbjct: 265 FITFPVPQNKVSMISVGQ--EINF--YSDSYPGETFTGKITAINSFINNSNRSITVQATY 320

Query: 388 EVILKITDLAFSDNNIELRNGF 409
                      ++ + ++  G 
Sbjct: 321 -----------ANPHHKIVAGM 331


>gi|148544382|ref|YP_001271752.1| condensin subunit Smc [Lactobacillus reuteri DSM 20016]
 gi|184153746|ref|YP_001842087.1| cell division protein [Lactobacillus reuteri JCM 1112]
 gi|227363193|ref|ZP_03847327.1| SMC structural maintenance of chromosomes partitioning protein
           [Lactobacillus reuteri MM2-3]
 gi|325682702|ref|ZP_08162218.1| cell division protein Smc [Lactobacillus reuteri MM4-1A]
 gi|148531416|gb|ABQ83415.1| condensin subunit Smc [Lactobacillus reuteri DSM 20016]
 gi|183225090|dbj|BAG25607.1| cell division protein [Lactobacillus reuteri JCM 1112]
 gi|227071799|gb|EEI10088.1| SMC structural maintenance of chromosomes partitioning protein
           [Lactobacillus reuteri MM2-3]
 gi|324977052|gb|EGC14003.1| cell division protein Smc [Lactobacillus reuteri MM4-1A]
          Length = 1187

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 74/195 (37%), Gaps = 5/195 (2%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ--LLDFLGKYHSTCSKVFNYGI 157
           +  ++ L+     ++S+   +++KY+ L    +  E Q    D   + + +  +  N   
Sbjct: 718 QQQVQTLQDKFHEQESSCQLISSKYETLTNRVQILETQNKQQDTQHQDYESQVQQNNEQA 777

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
             V + L   + +++ I     +L+N  S     L+  Q+ + + +   ++      + N
Sbjct: 778 DKVNQELTQVVAKIKQILTQIDELQNDESTQARQLAQMQQKIAVAEERLQQYQRQSQEYN 837

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQNQRTFA 274
           +Q R V +S  ++   I E        +           +  +E ++    LE N     
Sbjct: 838 RQRREVEESLEKVTIAIAELTTQSASQSTSEQSTQTALKDAKEEQAKAKVQLEDNSVALE 897

Query: 275 DEMSKLTILEKTREQ 289
           +   KL+  E    +
Sbjct: 898 ELEQKLSQAEAHYNR 912



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 72/211 (34%), Gaps = 6/211 (2%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           ++T +         +   + ++ R  + ++K     L  +    E+   + E+++     
Sbjct: 646 VVTLDGQLINASGAMTGGATRSQRTGLLSQKQMAKQLEEELKKQEQLAANLEQEVAKLQQ 705

Query: 144 KYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              +    V  +   + ++      + +  + I      L N+  +L             
Sbjct: 706 AQKANEQVVADYQQQVQTLQDKFHEQESSCQLISSKYETLTNRVQILETQNKQQDTQHQD 765

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            ++  ++N    + +NQ+   V     ++   I E +N          +   + A     
Sbjct: 766 YESQVQQNNEQADKVNQELTQVVAKIKQILTQIDELQNDESTQARQLAQMQQKIAV---- 821

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               L+Q QR   +   +   +E++ E+ TI
Sbjct: 822 AEERLQQYQRQSQEYNRQRREVEESLEKVTI 852



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 64/207 (30%), Gaps = 4/207 (1%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHS 147
            +    I      I  L+    T+   L  +  K  V E+  +   R+ Q  +   +   
Sbjct: 785 TQVVAKIKQILTQIDELQNDESTQARQLAQMQQKIAVAEERLQQYQRQSQEYNRQRREVE 844

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              +     I+ +      + T  +S      D + + +  +  L  +   L  ++    
Sbjct: 845 ESLEKVTIAIAELTTQSASQSTSEQSTQTALKDAKEEQAKAKVQLEDNSVALEELEQKLS 904

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +     N L + +R        L E   + ++M+        E      +  ++    L+
Sbjct: 905 QAEAHYNRLQELQRAALDDRNNLNEERVKYESMVDQALNRLSEQYSMTIDEARQQMSKLD 964

Query: 268 QNQRTFADEMSKLTILEKTREQKTILS 294
           +   T A  +  L        Q  + +
Sbjct: 965 EE--TLATRLKLLKRGLDDLGQVNVGA 989



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 75/214 (35%), Gaps = 9/214 (4%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E +E    I    +  K     +D  ++   +      + +   + ++ + +    + 
Sbjct: 201 QIEPLEEQSAIAQDYLEQKKQFDVLDRTQTVRHYDEYYGKLTKLGAKLKQAEEMVKDYQR 260

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKN 204
            +   +     +    + L     R+++I LN+ +   K    +++ S  ++      + 
Sbjct: 261 QAGHDRQQLDNLKQKRQQLNATKDRLQAIILNQTEAIAKYENQQSVSSVRREQRENEQRR 320

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLK 260
           L  +    Q +LN + + V  S     E + EQK ++      ++ A      E    LK
Sbjct: 321 LTAQ----QAELNARLKEVKASQRANDEQLAEQKALINSQQAEFEAARKMSSSERIATLK 376

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           +   DL   Q +   E + +   +    +    +
Sbjct: 377 QQVEDLRNQQVSLMQERTTIHNQQSFLSRNHEQA 410


>gi|332561035|ref|ZP_08415353.1| RND family efflux transporter MFP subunit [Rhodobacter sphaeroides
           WS8N]
 gi|332274833|gb|EGJ20149.1| RND family efflux transporter MFP subunit [Rhodobacter sphaeroides
           WS8N]
          Length = 418

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 62/193 (32%), Gaps = 1/193 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + ++V ++G +     V E+ S  SG +    V+   ++  G PL   +D      +   
Sbjct: 60  LVVTVMATGTVQPTTQV-EVSSELSGTLAAVDVDYNDEVAVGQPLARLDDTRLKAQVANA 118

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S++     ++  ++        Y       +      LD +    +         I+ 
Sbjct: 119 EASLEAAEGRLEQARATALEAAENYRSRSALDQRGVAAHLDLVATEAAHKRAESEVKIAE 178

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             R+L      ++ + L +  + +    +    ++    +               DL + 
Sbjct: 179 ADRTLAAANLEVQRVDLAKAVIRSPIRGIVLDRAAEAGQIVASSLNTPVLFTLAEDLTRM 238

Query: 220 ERIVYKSTLELRE 232
           E  V     ++  
Sbjct: 239 ELRVDIDEADIGR 251



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 18/205 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E+    +               R +    D    E A+   E    + +  RT A   
Sbjct: 128 RLEQARATALEAAENYRSRSALDQRGVAAHLDLVATEAAHKRAESEVKIAEADRTLAA-- 185

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHS-KLTYIRAKV 334
           + L +      +  I SPI G ++  ++  +      S   P++  +        +R  +
Sbjct: 186 ANLEVQRVDLAKAVIRSPIRGIVLD-RAAEAGQIVASSLNTPVLFTLAEDLTRMELRVDI 244

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               I  V+ G  A+ +   Y     K     +                   Y+ +L + 
Sbjct: 245 DEADIGRVRVGNRASFKVDAYPGRSFKAEIVQVRYAPETTDGVVT-------YKAVLSVD 297

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
           +         LR G  A    T   
Sbjct: 298 NGERL-----LRPGMTATATITVAE 317


>gi|325499054|gb|EGC96913.1| HlyD family secretion protein [Escherichia fergusonii ECD227]
          Length = 355

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAVVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAHRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPASISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|325294856|ref|YP_004281370.1| efflux transporter, RND family, MFP subunit [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065304|gb|ADY73311.1| efflux transporter, RND family, MFP subunit [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 390

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 57/154 (37%), Gaps = 3/154 (1%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG ++ +  +  +     G +K+ +V+ G ++ +G  L   +  E    +   K ++K +
Sbjct: 52  SGTVIPDKQI-MVSPKVVGYLKEIKVKVGDRVRKGEVLAVIDSSEIKPDVKKAKAALKEV 110

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              +     A++ +       +  +   +     F   Y S    V       +   L+ 
Sbjct: 111 EAALREIDKAVEEVKALKSAAKANYNFTQRTYQRFKRLYESEA--VSKQKFDEIKTKLEE 168

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             +++++I      L  K   L A     + +L+
Sbjct: 169 AKSKLKAIEAKEAQLLEKKKGLLAKKEQVKAELS 202



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 85/268 (31%), Gaps = 43/268 (16%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S      +     +LK     +R I     +++   S  +A  +  Q+     K L+E  
Sbjct: 93  SSEIKPDVKKAKAALKEVEAALREIDKAVEEVKALKSAAKANYNFTQRTYQRFKRLYESE 152

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           AVS+   +           E++  + E K+ L+ I     +        L E  + L   
Sbjct: 153 AVSKQKFD-----------EIKTKLEEAKSKLKAIEAKEAQ--------LLEKKKGLLAK 193

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +     E+SK +          + SPI G ++     +  N       + ++   S    
Sbjct: 194 KEQVKAELSKASAF---LSYTYLKSPIDGIVLKKLVDN-GNLIFPQTSVFQL--GSYPLR 247

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A +       VK G T  V+       + K     + ++D       +       + +
Sbjct: 248 VHAFIDSSYAGKVKVGETLPVKL------KNKVIMGKVTEVDKSADPASHK------FGI 295

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTA 417
            + I       N   +  G  A V    
Sbjct: 296 KVDI------GNPKGVIPGDYAVVEIPT 317


>gi|315122979|ref|YP_004064985.1| putative efflux pump or secretion protein [Pseudoalteromonas sp.
           SM9913]
 gi|315016739|gb|ADT70076.1| putative efflux pump or secretion protein [Pseudoalteromonas sp.
           SM9913]
          Length = 354

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 67/210 (31%), Gaps = 22/210 (10%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                   +   +     +L     + + +  N   LE + S   A L   Q      + 
Sbjct: 72  LFEIDKNTYQLALEQAQLALDDAKLQNKRLDTNVKALEAQISAANAKLHEQQLLKKRGET 131

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L+++N++S+ +L             +R N    ++ L        EA L           
Sbjct: 132 LYKQNSISEQELE-----------SIRANFAASQSNLAAFEAQLAEAVL--------ARG 172

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           D  QN        ++L   E       + +   G +   Q     +YA   +PL+ IV  
Sbjct: 173 DSGQNNLALRHAANQLAQAELNLSYTQVRALSDGVVANLQLL-EGSYAVAGKPLLAIVAK 231

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
                  A    K + +++ G  A V F  
Sbjct: 232 KADLV--ADFREKSLSNMQPGSLAKVVFDS 259


>gi|291276976|ref|YP_003516748.1| HlyD family secretion protein [Helicobacter mustelae 12198]
 gi|290964170|emb|CBG40015.1| putative HlyD family secretion protein [Helicobacter mustelae
           12198]
          Length = 337

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 20/197 (10%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           D  Q++ I+ ++ L   + I E K       E   +         + I  +++  +    
Sbjct: 80  DFLQKDIIIKQAKLTQAQYILENKKKELERYENLLKTKSVALQQYENIQYEVKMQESNIL 139

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              ++L I +    QK I +P  G IV  +   S  + +  + + +I+       +   V
Sbjct: 140 ALQTELEISKLDLAQKIIYAPFDGVIVDQKIHQS-EWIRAGETICQILNTKDAEVV-TDV 197

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               ++ +K G    V+          + K  + K+  II + D N +    Y + +K  
Sbjct: 198 PSFMVEFLKLGQRVQVKI---------RQKIYLGKVSAIIPRADRNSRNFPVY-ISIKTD 247

Query: 395 DLAFSDNNIELRNGFPA 411
           D         L  G  A
Sbjct: 248 D--------TLLEGMSA 256



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 39/102 (38%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I S  SG +++   E G ++ +G  L+   D      I +K+  +   +  ++ +K  L+
Sbjct: 49  IASQSSGAVEEVYFELGQRVKKGERLIRLNDDFLQKDIIIKQAKLTQAQYILENKKKELE 108

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              N       A +  E    +   +  +  +      IS +
Sbjct: 109 RYENLLKTKSVALQQYENIQYEVKMQESNILALQTELEISKL 150


>gi|269963997|ref|ZP_06178304.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831281|gb|EEZ85433.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 349

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 73/246 (29%), Gaps = 25/246 (10%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +L++      +  +  +   ++     L+       + +      +   S       + +
Sbjct: 63  ELVEKGQPLFAIDASSYQLKVAQAKAELRQARESDSAKWQQLAAAKQTQSQREFEYHNAK 122

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           + LT  + L  K   ++ +L+        ++  +     E K +   ++     A +E A
Sbjct: 123 QKLTRNQKLRNKGLATEQELDDAITNTQVASSAVEAANAEVKRIEAELSTQDRTAAIELA 182

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                +KL   E       I++   G +   Q  S  +Y  Q  
Sbjct: 183 E--------------------AKLASAELDLSHTQIVAQTEGVVTNLQLQS-GSYITQGT 221

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
             + +V      +I A    K I  +  G    V F        K F   +   +  I  
Sbjct: 222 ASLMLV-DEAHAWISADFNEKGIDKLTNGREVLVSFDALP---GKVFTGEVSSQERAIYD 277

Query: 377 QDNNLQ 382
            +N   
Sbjct: 278 TNNANG 283



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 79/240 (32%), Gaps = 6/240 (2%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            NV  I    SG+I    V NG  + +G PL   +       +   K  ++  R     +
Sbjct: 41  RNVATIAPEVSGVITDVMVNNGELVEKGQPLFAIDASSYQLKVAQAKAELRQARESDSAK 100

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              L          E  + + +++L       +   +       +     +        +
Sbjct: 101 WQQLAAAKQTQSQREFEYHNAKQKLTRNQKLRNKGLATEQELDDAITNTQVASSAVEAAN 160

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRE 232
             + R++ E  +    A +   +  L   + +L     V+Q      E +V    L+   
Sbjct: 161 AEVKRIEAELSTQDRTAAIELAEAKLASAELDLSHTQIVAQT-----EGVVTNLQLQSGS 215

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            I +    L  ++E +   + +F     +   +  +   +F     K+   E + +++ I
Sbjct: 216 YITQGTASLMLVDEAHAWISADFNEKGIDKLTNGREVLVSFDALPGKVFTGEVSSQERAI 275


>gi|332750115|gb|EGJ80526.1| hlyD family secretion family protein [Shigella flexneri 4343-70]
 gi|332997190|gb|EGK16806.1| hlyD family secretion family protein [Shigella flexneri K-218]
          Length = 361

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 49  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 108

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 109 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNSFSERDIDDARQNFLAQDALVKGSVAEQ 168

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 169 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 225

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 226 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 281

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 282 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 330


>gi|329916018|ref|ZP_08276329.1| putative RND efflux membrane fusion protein [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327544806|gb|EGF30199.1| putative RND efflux membrane fusion protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 431

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 69/199 (34%), Gaps = 8/199 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + + + G ++   +V  ++    G++++     G  +  G  L T +      
Sbjct: 68  ATAADMPVILDALGTVMPAASV-TVRPQVGGVLQQILFREGETVRAGQVLATIDP----R 122

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +L  +     R   + + ++      ++  L        +++             V +
Sbjct: 123 QFELVLMQASGQRQRDEAQLASAKVTLERFKTLLAQDSIARQEVDTQQALVKQLEGTVLS 182

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL--LRALLSSHQKDLTMMKNLFEKNAVS 212
              +     L +  +++ +    R+ L    +   +    ++    +T +  +  + AV 
Sbjct: 183 DRATEGTARLNLGYSKITAPIAGRVGLRAVDAGNVVNPGDAAGIVVITQLTPIDVQFAVP 242

Query: 213 QNDLNQ-QERIVYKSTLEL 230
           Q+ +    ER   K+ L +
Sbjct: 243 QDRVTDVLERSAGKAELAV 261



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/188 (11%), Positives = 59/188 (31%), Gaps = 11/188 (5%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE-ANLEFANYLKE 261
           + +     ++  D  Q E ++ +++ + + +  +  +    +       A    A    +
Sbjct: 108 ETVRAGQVLATIDPRQFELVLMQASGQRQRDEAQLASAKVTLERFKTLLAQDSIARQEVD 167

Query: 262 ISRDL-EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--- 317
             + L +Q + T   + +             I +PIAG +   ++  + N          
Sbjct: 168 TQQALVKQLEGTVLSDRATEGTARLNLGYSKITAPIAGRV-GLRAVDAGNVVNPGDAAGI 226

Query: 318 --LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF-KAIIEKIDPII 374
             + ++ P      +  +     +     G  A +    +   R           +D +I
Sbjct: 227 VVITQLTPIDVQFAV-PQDRVTDVLERSAG-KAELAVTVFDRTRVTLLATGRFSTLDNLI 284

Query: 375 SQQDNNLQ 382
             Q   ++
Sbjct: 285 DVQTGTVK 292


>gi|293416915|ref|ZP_06659552.1| HlyD family secretion protein [Escherichia coli B185]
 gi|291431491|gb|EFF04476.1| HlyD family secretion protein [Escherichia coli B185]
          Length = 355

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAVIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|198431970|ref|XP_002121885.1| PREDICTED: similar to epidermal growth factor receptor pathway
           substrate 15-like 1 [Ciona intestinalis]
          Length = 794

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 76/209 (36%), Gaps = 7/209 (3%)

Query: 84  LLTFEDIETTDLIDLKK-VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
           L T    +T  L D    V        +D     ++ L  + + L    + +E  +    
Sbjct: 216 LFTLYATDTGSLSDASSGVGDSAAMRELDALNQEIEELRREKESLTAEIQQKESAIRTAS 275

Query: 143 GKYHSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                    +      ++ +        TR+  +   +  L++  S ++  +   Q++  
Sbjct: 276 HDVQELQDTLDRNSSSLAQLECDKSEAHTRLDELDQQKNKLDSMLSDVKQKV---QEETE 332

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            +K+L  K +  +  + QQE  + +   EL +  +E+  + + + E   +  +     L+
Sbjct: 333 NIKSLRAKISAQEASVGQQEVELRRVRDELAKMKNEETQLEQRL-EAGKQRQMGVDRSLE 391

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQ 289
           E   ++++ Q        +   +E   +Q
Sbjct: 392 EAQTEIKKVQGQIQKLQEQQKSVESNIDQ 420


>gi|182412332|ref|YP_001817398.1| RND family efflux transporter MFP subunit [Opitutus terrae PB90-1]
 gi|177839546|gb|ACB73798.1| efflux transporter, RND family, MFP subunit [Opitutus terrae
           PB90-1]
          Length = 363

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 12/220 (5%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            E+  V   +  ++++++ +  L E+   + + ++ L      +       AN +     
Sbjct: 87  VEEVLVRTGEAVKKDQVLARLRLDEIEAQLTQARSALAKAERDFARVERLQANAVA-TLE 145

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           DL+  +       +++ I E  R    I +P  G I+  +    +      + ++     
Sbjct: 146 DLQDARTGVDVAAAQMRIAEFNRRYAVITAPADGQILR-RLVEPNEIVAPGKAVLGFAAD 204

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQDN 379
                +RA V    +  ++ G  A V         E      I +I         + +  
Sbjct: 205 DSGWLVRAGVADADLARLQPGDRAEVTLS---HAAEMTLPGAITRIAGAANSSTRTTEVE 261

Query: 380 NLQTQEYYEVILKIT-DLAFSDNNIELRNGFPAEVLFTAK 418
            L  Q        +   +      +  R   PA VL   +
Sbjct: 262 ILLAQPPTAARSGVAVAVTLWPRPVTPRPVVPASVLIEGE 301



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/102 (10%), Positives = 33/102 (32%), Gaps = 1/102 (0%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI-KNLRCHIDTEKSALDFLNN 122
            G++++  V  G  + +   L      E    +   + ++ K  R     E+   + +  
Sbjct: 84  GGVVEEVLVRTGEAVKKDQVLARLRLDEIEAQLTQARSALAKAERDFARVERLQANAVAT 143

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             D+ +             + +++   + +       + R L
Sbjct: 144 LEDLQDARTGVDVAAAQMRIAEFNRRYAVITAPADGQILRRL 185


>gi|145219366|ref|YP_001130075.1| RND family efflux transporter MFP subunit [Prosthecochloris
           vibrioformis DSM 265]
 gi|145205530|gb|ABP36573.1| efflux transporter, RND family, MFP subunit [Chlorobium
           phaeovibrioides DSM 265]
          Length = 324

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 67/207 (32%), Gaps = 24/207 (11%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E +     +E R  +  Q  +   + E+  +           +   L  ++R    + +K
Sbjct: 48  ETVSTTGVVEPRNRLKIQPAIAGRVEEVMVQEGEMVEKGR--VLALLSSSERAALLDAAK 105

Query: 280 LTILEKTR------EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           L   ++         +  +L+PI G ++  +S         S  L  +   S    + A 
Sbjct: 106 LQGKDEQAYWKSVYRETAVLAPIDGQVI-VRSIEPGQTVSASDSLFVL---SDRLTVTAF 161

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    I  V+KG  A +    Y DIR       +  I      Q+N       Y V +  
Sbjct: 162 VDETDIGRVQKGQRAVISLDAYPDIR---VGGQVSHIYYESHLQNN----VSIYFVDVVP 214

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +         R+G  A +    +  
Sbjct: 215 DSIPSV-----YRSGMSANIDIAVRER 236



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +VS++G +    N ++I+   +G +++  V+ G  + +G  L      E   L+D  
Sbjct: 46  LVETVSTTGVVEP-RNRLKIQPAIAGRVEEVMVQEGEMVEKGRVLALLSSSERAALLDAA 104

Query: 100 KVSIKNLRCH 109
           K+  K+ + +
Sbjct: 105 KLQGKDEQAY 114


>gi|29346623|ref|NP_810126.1| periplasmic component of efflux system [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|29338520|gb|AAO76320.1| periplasmic component of efflux system [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 409

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 73/213 (34%), Gaps = 12/213 (5%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHE---QKNMLRHINELYDEANLEFANYLKEISRD 265
             +++ D    +  +            E   QK        L+D++ +   +Y ++   +
Sbjct: 86  QLIAEMDRVTLQSELASQQATYDGAKAEFEYQKKNYERSKGLHDKSLISDTDY-EQALYN 144

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIV 322
            ++ +  F    + L   E+     TI SPI G ++  +   +            L  I 
Sbjct: 145 YQKAKSAFDSSKASLAKAERNLSYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIA 203

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  + A V    I  +++G  A+     Y +     F  ++ +I  +     ++  
Sbjct: 204 ADLTQMQVVADVDEADIGGIEEGQRASFTVDAYPND---VFDGVVTQI-RLGDASSSSSA 259

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +     V+     ++  + +++L+    A V  
Sbjct: 260 SSSTSTVVTYEVVISAPNPDLKLKPRLTANVTI 292



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 43/105 (40%), Gaps = 1/105 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII K  V+  S + +G  +   + +     +  +
Sbjct: 45  ISNSVTATGTIEPVIEV-EVGTQVSGIIDKIYVDYNSVVTKGQLIAEMDRVTLQSELASQ 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           + +    +   + +K   +     +D    +    E+ L ++   
Sbjct: 104 QATYDGAKAEFEYQKKNYERSKGLHDKSLISDTDYEQALYNYQKA 148


>gi|33863840|ref|NP_895400.1| ABC-transporter component [Prochlorococcus marinus str. MIT 9313]
 gi|33635423|emb|CAE21748.1| ABC-transporter component [Prochlorococcus marinus str. MIT 9313]
          Length = 358

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 57/386 (14%), Positives = 117/386 (30%), Gaps = 86/386 (22%)

Query: 44  VSSSGEILNEDNVVEIKSPFS---GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +++ G +  ++N++ +  P S     IK   +  G  + +G  +  F      D++D ++
Sbjct: 51  ITAMGRMEPQNNLIRVAPPSSRGRSRIKTLHIAEGDFVKRGQLIAEF------DVVDERR 104

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            ++                               E+ L     +Y  +  +     I   
Sbjct: 105 SNL----------------------------VVAEQNLAITKRRYEVSKGESQASRI--- 133

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                                  K   L   L+  ++DL   +NL+   A S +DL+  +
Sbjct: 134 -----------------------KLRRLEYELTKAERDLGRYRNLYNNGAFSLSDLDAVK 170

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            +  K+    RE + E K     I+      +L     + E +  L   +         +
Sbjct: 171 LVRDKA----REMLEEHKASFERIDGQQVGTSL-LKEGVSEANIKLVAAE---------V 216

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
           +      EQ  + +P  G I+           Q+   LM     +      A+V    ++
Sbjct: 217 SKARHYLEQAMVRAPQDGYILKLLKHVGEEVDQRGLLLMG---DTSKMVTVAEVYENDVK 273

Query: 341 HVKKGYTATVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           H+K+G  A +     +            +   + II            +EV + +     
Sbjct: 274 HIKEGQKALISSKALSSPARGTVISVGSLVYKNDIIGDDPTADVDTRVFEVRILMDASDE 333

Query: 399 SDNNIELRNGFPAEVLFTAKNTTLAQ 424
                 L       V   +  T +A 
Sbjct: 334 LKKMSRL----QVNVEIQSSPTEIAS 355


>gi|326678013|ref|XP_002666141.2| PREDICTED: LOW QUALITY PROTEIN: myosin heavy chain, fast skeletal
            muscle, partial [Danio rerio]
          Length = 1888

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 80/214 (37%), Gaps = 12/214 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ----LLDFLG 143
            +  E+ + ++ K  S++  +  +  E   L     + + L    + ++      L ++  
Sbjct: 1402 DAEESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQ 1461

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY    +++   G     RSL  ++ +M++ Y   LD   +   L+    + Q++++ + 
Sbjct: 1462 KYEEGQAEL--EGAQKEARSLSTEIFKMKNSYEEALD---QLETLKRENKNLQQEISDLT 1516

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                +   S ++L + ++ V     E++  + E +  L H         LE      EI 
Sbjct: 1517 EQLGETGKSIHELEKAKKTVESEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKSEID 1576

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQK---TILS 294
            R L +              +  + +      I S
Sbjct: 1577 RKLAEKDEEIEQIKRNSQRVMDSMQSTLDSEIRS 1610



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 86/229 (37%), Gaps = 24/229 (10%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREE--QL 138
            L  +  ++   +  +  +++ ++  ++ EKS     +D L++  + + KA  + E+  + 
Sbjct: 1195 LRKKQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLSSNMEAVAKAKTNLEKICRT 1254

Query: 139  LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            L+       T +      ++ +        T          + E   S L     ++ + 
Sbjct: 1255 LEDQASELKTKNDELVRQLNDISAQKARLQTENGEFGRQMEEKEALVSQLTRGKQAYTQQ 1314

Query: 199  LTMMKNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +K   E+   ++N L               +Q     ++  EL+  + +  + +   
Sbjct: 1315 IEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQW 1374

Query: 245  NELYD----EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               Y+    +   E     K++++ L+  + +     SK   LEKT+++
Sbjct: 1375 RTKYETDAIQRTEELEESKKKLAQRLQDAEESIEAVNSKCASLEKTKQR 1423



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 73/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K   I      I+ E+S    L  K   L+   
Sbjct: 1059 EGDLKLAQESIMDLENDKQQSEEKIKKKDFEISQFLSKIEDEQSLGAQLQKKIKELQARI 1118

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1119 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1172

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1173 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1227

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +       + +   +LE+  RT  D+ S+L        ++
Sbjct: 1228 KMEIDDLSSNMEAVAKAKTNLEKICRTLEDQASELKTKNDELVRQ 1272



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 79/216 (36%), Gaps = 22/216 (10%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + ++G   +  +        +L +  I+ LR  ++                E+  +  E
Sbjct: 1661 DEAVRGQEDMKEQVAMVERRNNLMQAEIEELRAALEQ--------------TERGRKVAE 1706

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            ++L+D      S    + +   +S+  + K     +  I     D   ++          
Sbjct: 1707 QELVDA-----SERVGLLHSQNTSLINTKKKLEADLVQIQGEVEDSVQEARNAEEKAKKA 1761

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              D  MM    +K   +   L + ++ +  +  +L+  + E +N+     +   +   + 
Sbjct: 1762 ITDAAMMAEELKKEQDTSAHLERMKKNLEVTVKDLQHRLDEAENLAMKGGKKQLQ---KL 1818

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             + ++E+  ++E  QR  AD +  +   E+  ++ T
Sbjct: 1819 ESRVRELESEVEAEQRRGADAVKGVRKYERRVKELT 1854


>gi|317054853|ref|YP_004103320.1| sugar-specific permease EIIA 1 domain [Ruminococcus albus 7]
 gi|315447122|gb|ADU20686.1| sugar-specific permease EIIA 1 domain [Ruminococcus albus 7]
          Length = 599

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 68/186 (36%), Gaps = 33/186 (17%)

Query: 18  KRMTLLSIIGIIGLITW----------------SILLPIEISVSSSGE---------ILN 52
           K +  L IIG +G   W                  +  +    + +G          ++ 
Sbjct: 45  KAVATLLIIGGVGFGGWKLYKNYAGPEANSSDKVYVQKVANVNTVTGADLFANSFPGVIV 104

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               V++K   +  IK   V  G ++ +G  LLT++       ID  K+ ++  +  IDT
Sbjct: 105 SQKSVDVKYDSTKTIKDILVAEGDKVNKGDKLLTYDTDAIKIEIDTAKLDVERAQNEIDT 164

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN--YGISSVYRSLKMKLTR 170
               +          E+  ++ E+Q++ +  +     S      Y I +    +K   + 
Sbjct: 165 NNLQIK------QYEEEKKKASEDQVVSYTNQILQLQSDNARKEYDIKAKNVEIKKLESS 218

Query: 171 MRSIYL 176
           M++ Y+
Sbjct: 219 MKNAYV 224



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 66/182 (36%), Gaps = 15/182 (8%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + +++  +  V ++  E+  N  + K       +  ++  + + N + ++  D  + +  
Sbjct: 145 KIEIDTAKLDVERAQNEIDTNNLQIKQYEEEKKKASEDQVVSYTNQILQLQSDNARKEYD 204

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN--------YAQQSQPLMKIVPH 324
              +  ++  LE + +   +++PI GT+   +  SS                 +MK+   
Sbjct: 205 IKAKNVEIKKLESSMKNAYVVAPITGTVKELKDPSSGMNDEYDYRYGESDGDAIMKLTAE 264

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                ++     +    +  G    +R     D      + ++ +ID   S Q NN    
Sbjct: 265 GD-YRVKGVFNEQNSSSIYNGAEVILR-SRIDDTCT---EGVVNEID--TSPQKNNDDMY 317

Query: 385 EY 386
            Y
Sbjct: 318 GY 319


>gi|302878582|ref|YP_003847146.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
 gi|302581371|gb|ADL55382.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
          Length = 534

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 70/201 (34%), Gaps = 33/201 (16%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            + R   E    A  E +  +++++       + +    S+L     +R   T  +P +G
Sbjct: 175 RIARQGEETLKNAGSEASLGMRQLAEAASARLKNWDIAASQLNQSGSSRRTLTYYAPASG 234

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  ++          + L +I   SK+  I A++  + I  +  G  A +    Y D 
Sbjct: 235 IVMEKKAV-QGMRFLPGETLYQIADLSKVWVI-AEINEQDIGQLSVGGVAQIHIAAYPDQ 292

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF--------- 409
               F+  I  I PI++     +Q      V +++ + A      +L+            
Sbjct: 293 T---FEGKIAFIYPILNAASRTVQ------VRVELDNQA-----GQLKPAMYASVTLQAA 338

Query: 410 --------PAEVLFTAKNTTL 422
                   P   +  +   T+
Sbjct: 339 HHPEVLSVPVSAVIDSGKRTI 359


>gi|258512390|ref|YP_003185824.1| Multidrug resistance efflux pump-like protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257479116|gb|ACV59435.1| Multidrug resistance efflux pump-like protein [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 214

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 48/153 (31%), Gaps = 10/153 (6%)

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            Q +  D M  +++        ++ +P   TIV NQ+ +         PL      +   
Sbjct: 66  AQFSAGDVMGTISVPGAKGATVSVTAPETATIVQNQAVNHQFVV-AGTPLAYAYNLND-L 123

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQ 384
           ++ A V    I  V  G    V    +       F+ ++++I    +             
Sbjct: 124 WVTANVKETDINDVHVGQNVDVYVDAFPGT---SFQGVVQQIGLATAATFSLLPQTNNNA 180

Query: 385 EYYEV-ILKITDLAFSDNNIELRNGFPAEVLFT 416
            + +V  +    +       +L  G  A V   
Sbjct: 181 NFTKVTQVIPVRIRLQTYTGQLVPGMSATVRIH 213


>gi|332764210|gb|EGJ94447.1| hlyD secretion family protein [Shigella flexneri 2930-71]
          Length = 358

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 46  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 105

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 106 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 165

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 166 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 222

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 223 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 278

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 279 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 327


>gi|302188800|ref|ZP_07265473.1| hypothetical protein Psyrps6_20737 [Pseudomonas syringae pv.
           syringae 642]
          Length = 440

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 54/158 (34%), Gaps = 4/158 (2%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  SV +  E++     V       G++ +F V+    +  G  LL FE+       D+
Sbjct: 191 PVRQSVLAPAEVVPLGGRVVAAPLD-GVVAEFLVKPNQIVKTGDLLLRFENTTLKAQADV 249

Query: 99  KKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            + ++      +             +++ D+L    E +  +          +  +    
Sbjct: 250 AERALGVAEAELKANSQRSFADAESSSRIDLLAARVEQKRAERDYARELLKRSEVRAERD 309

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           GI+    + +     +++        +   + LR  L+
Sbjct: 310 GIAVFADAQRWLGKPVQTGERLLEIADPSQAELRIELA 347



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/128 (10%), Positives = 40/128 (31%), Gaps = 2/128 (1%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +  V  N + +   ++ +      +   +       + E   +AN + +    E S  
Sbjct: 218 VAEFLVKPNQIVKTGDLLLRFENTTLKAQADVAERALGVAEAELKANSQRSFADAESSSR 277

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-P 323
           ++        + ++     +  ++  + +   G  +  +         Q  + L++I  P
Sbjct: 278 IDLLAARVEQKRAERDYARELLKRSEVRAERDGIAVFADAQRWLGKPVQTGERLLEIADP 337

Query: 324 HSKLTYIR 331
                 I 
Sbjct: 338 SQAELRIE 345


>gi|254524892|ref|ZP_05136947.1| multidrug resistance efflux pump [Stenotrophomonas sp. SKA14]
 gi|219722483|gb|EED41008.1| multidrug resistance efflux pump [Stenotrophomonas sp. SKA14]
          Length = 393

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 87/269 (32%), Gaps = 28/269 (10%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +L   + + R +Y +    +   +  +  L   + D    K+L    A+S  +
Sbjct: 96  ALQQAEANLAKTVRQTRGLYRSVEGAQADLNARQVTLKRVRDDFARRKDLAATGAISNEE 155

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      +  +   +  +    +     +++       +      ++ +    N      
Sbjct: 156 LAHARDELAAAEAAVAGSRETVERNRALVDDTVIATQPDVQAAAAQLRQAFLNN------ 209

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                        +  I++P+ G +   +S       Q    LM +VP  +  ++ A   
Sbjct: 210 ------------ARAGIVAPVTGYVAR-RSVQVGQRVQPGNALMAVVPT-EQMWVEANFK 255

Query: 336 PKQIQHVKKGYTATVRFPHY-ADIRE-------KKFKAIIEKIDPIISQQDNNLQTQEYY 387
             Q++H++ G    ++   Y  D++                 + P  +   N ++  +  
Sbjct: 256 ETQLRHMRLGQEVELKSDLYAGDVKYKGRIQSLGLGTGSAFSLLPAQNASGNWIKIVQRV 315

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFT 416
            V + I     +++ + +     AEV   
Sbjct: 316 PVRIAIDAKQLAEHPLRIGLSMKAEVSLR 344



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/132 (12%), Positives = 49/132 (37%), Gaps = 6/132 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV----SIKNLR 107
            + N V+I    +G +     ++G ++ +G  L+  +  +T+  +   +     +++  R
Sbjct: 53  VQGNQVQITPLVAGTVVAINADDGMRVERGQLLVQLDPSDTSVALQQAEANLAKTVRQTR 112

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
               + + A   LN +   L++  +    +    L    +  ++   +    +  +    
Sbjct: 113 GLYRSVEGAQADLNARQVTLKRVRDDFARR--KDLAATGAISNEELAHARDELAAAEAAV 170

Query: 168 LTRMRSIYLNRL 179
                ++  NR 
Sbjct: 171 AGSRETVERNRA 182


>gi|24114861|ref|NP_709371.1| hypothetical protein SF3631 [Shigella flexneri 2a str. 301]
 gi|30065129|ref|NP_839300.1| hypothetical protein S4137 [Shigella flexneri 2a str. 2457T]
 gi|24054097|gb|AAN45078.1| putative membrane protein [Shigella flexneri 2a str. 301]
 gi|30043390|gb|AAP19111.1| putative membrane protein [Shigella flexneri 2a str. 2457T]
 gi|281602954|gb|ADA75938.1| Inner membrane protein yibH [Shigella flexneri 2002017]
 gi|313647539|gb|EFS11989.1| hlyD family secretion family protein [Shigella flexneri 2a str.
           2457T]
 gi|332749960|gb|EGJ80372.1| hlyD family secretion family protein [Shigella flexneri K-671]
 gi|332751191|gb|EGJ81594.1| hlyD family secretion family protein [Shigella flexneri 2747-71]
 gi|332997613|gb|EGK17227.1| hlyD family secretion family protein [Shigella flexneri K-272]
 gi|333012850|gb|EGK32227.1| hlyD family secretion family protein [Shigella flexneri K-304]
 gi|333013361|gb|EGK32733.1| hlyD family secretion family protein [Shigella flexneri K-227]
          Length = 361

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 49  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 108

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 109 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 168

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 169 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 225

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 226 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 281

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 282 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 330


>gi|146279866|ref|YP_001170024.1| ABC transporter related [Rhodobacter sphaeroides ATCC 17025]
 gi|145558107|gb|ABP72719.1| ABC transporter related [Rhodobacter sphaeroides ATCC 17025]
          Length = 418

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 70/222 (31%), Gaps = 20/222 (9%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM----LRHINELYDEANLEFANYL 259
            L  + A ++  L   E  + ++    RE     ++      R I    D    E AN+ 
Sbjct: 111 RLRAQVANAEASLEAAEGRLEQAQATAREAAENYRSRSTLDQRGIASHLDLIASEAANHR 170

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-SQPL 318
                 + +   T A   + L +      +  I SPI G ++   + +    A   + P+
Sbjct: 171 AIAEVKIAEADLTLA--RASLDVQRVDLAKSVIRSPIKGIVLDRAAETGQIVASSLNTPV 228

Query: 319 MKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +  +        +R  +    I  V+ G  AT R   +     K     +          
Sbjct: 229 LFTLAEDLNRMELRVDIDEADIGRVRMGNRATFRVDAFPARSFKAEIVQVRY-------A 281

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               +    Y+ IL + +         LR G  A    T  +
Sbjct: 282 PETTEGVVTYKAILSVDNSDRL-----LRPGMTATATITVAD 318



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 55/176 (31%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           VE+ S  SG I   +V+   ++  G  L   +D      +   + S++     ++  ++ 
Sbjct: 77  VEVSSELSGTIAAVEVDYNDEVEVGQALARLDDTRLRAQVANAEASLEAAEGRLEQAQAT 136

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                  Y       +      LD +    +    +    I+    +L      ++ + L
Sbjct: 137 AREAAENYRSRSTLDQRGIASHLDLIASEAANHRAIAEVKIAEADLTLARASLDVQRVDL 196

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +  + +    +    ++    +               DLN+ E  V     ++  
Sbjct: 197 AKSVIRSPIKGIVLDRAAETGQIVASSLNTPVLFTLAEDLNRMELRVDIDEADIGR 252


>gi|150388202|ref|YP_001318251.1| RND family efflux transporter MFP subunit [Alkaliphilus
           metalliredigens QYMF]
 gi|149948064|gb|ABR46592.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
           metalliredigens QYMF]
          Length = 386

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 46/250 (18%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           + R    +     +      ++  K++  +A     +     +K LFE+ AVSQ+ L++ 
Sbjct: 95  LIRVKASQAELEAARLQIETEIPAKTNQAKAQYELTKIKYDRVKALFEQGAVSQSQLDEI 154

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                                      + DE     A   KE+       +       + 
Sbjct: 155 -----------------------STKLIVDENTYNQAVDAKEV------AETKLQMAEAS 185

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L +        TI SPI G I+  +  +S        P++ I   +   +    V+ + I
Sbjct: 186 LDLANANISDTTIYSPIDGVILQ-KIVASGETTSGGHPIVVIGEVN-KVWAEIGVSDEYI 243

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             ++ G  + V    Y    +K  + II++I  +   +         + V +       +
Sbjct: 244 NALRIGQKSDV----YIYGIDKTVEGIIDEIAFLADTKTRT------FPVKI-----LLN 288

Query: 400 DNNIELRNGF 409
           + N EL+ G 
Sbjct: 289 NPNGELKPGM 298



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 49/156 (31%), Gaps = 9/156 (5%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG ++    V  +     G++    V  G  + +G P+ T E  +    +   +  ++  
Sbjct: 50  SGNVVPTQMVK-LSFKIPGVVSNVLVNEGDVVKEGQPIATMEQGDYLIRVKASQAELEAA 108

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R  I+TE  A          L K    R + L +           V    +  +   L +
Sbjct: 109 RLQIETEIPAKTNQAKAQYELTKIKYDRVKALFE--------QGAVSQSQLDEISTKLIV 160

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                      +   E K  +  A L     +++  
Sbjct: 161 DENTYNQAVDAKEVAETKLQMAEASLDLANANISDT 196


>gi|332291449|ref|YP_004430058.1| efflux transporter, RND family, MFP subunit [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332169535|gb|AEE18790.1| efflux transporter, RND family, MFP subunit [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 388

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/264 (12%), Positives = 85/264 (32%), Gaps = 14/264 (5%)

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
               E  +++ L  K + L+    +  +QL            +            L   +
Sbjct: 27  EALIESGSVEELQAKKEALKAEITTSNDQLAQIEKVLEEKTPR-------DKKEVLITTM 79

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           T   +++ + ++++      + +L   +   T+ + L ++       + + + +      
Sbjct: 80  TVKDTLFNHFIEVQGNVETKQNVLIYPEYQGTLSRVLVKEG----QRVRKGQTLARIDDG 135

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            L   + + ++ L  + +   E      +          Q +  +    + ++ +     
Sbjct: 136 GLGSQVAQMESQLA-LAKTTFERQQRLWDQKIGSEIQYLQAKTQYESSQNMVSQIRSQLG 194

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + T+ +P +G I                 L +IV +    Y+ A++    +  V  G   
Sbjct: 195 KTTVNAPFSGVIDQV-ITDQGTVVAPGMALFRIV-NLDNMYVAAEIPESYLPTVTAGKKV 252

Query: 349 TVRFPHYADIREKKFKAIIEKIDP 372
            V FP   +  E   +     I P
Sbjct: 253 KVDFPVLGETVETTVRQTGNYIKP 276



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             G +  + NV  I   + G + +  V+ G ++ +G  L   +D      +   +  +  
Sbjct: 92  VQGNVETKQNV-LIYPEYQGTLSRVLVKEGQRVRKGQTLARIDDGGLGSQVAQMESQLAL 150

Query: 106 LRCHIDTEKSALD 118
            +   + ++   D
Sbjct: 151 AKTTFERQQRLWD 163


>gi|171322831|ref|ZP_02911550.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MEX-5]
 gi|171091810|gb|EDT37316.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MEX-5]
          Length = 191

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++  +  +  ++ TI++P+ GT+   +S           PLM IV      +I A     
Sbjct: 5   AQFRLAYRNLKRTTIVAPVDGTV-GQRSVQVGQQVGPGVPLMSIV-QLNRLWIEANFKEG 62

Query: 338 QIQHVKKGYTATVRFPHYADI 358
           QI+H++ G    V    Y   
Sbjct: 63  QIRHMRIGQPVDVVSDLYGSR 83


>gi|53803959|ref|YP_114160.1| RND family efflux transporter MFP subunit [Methylococcus capsulatus
           str. Bath]
 gi|53757720|gb|AAU92011.1| efflux transporter, RND family, MFP subunit [Methylococcus
           capsulatus str. Bath]
          Length = 431

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 75/244 (30%), Gaps = 27/244 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E+ +    A+L + ++   +  N+    A+++      +R +Y         + +Q+  L
Sbjct: 124 EDLARAHAAVLRARERIRLVSSNIRRAEAIARQAALTYQR-MYSVNQTTPNLVAQQEVDL 182

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
                    A L        ++          A+  ++        +  TI +P AG + 
Sbjct: 183 AQSQADATAAELSSRQAAALVAEQ------ELAEAQAEELKARTLADYATIRAPFAGIVT 236

Query: 302 YNQSFSSSNY---AQQSQPLMKIV--PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
              + + +      Q SQ  M +V         +   V    +  V      TV  P   
Sbjct: 237 KRYADTGAMVPQGIQSSQQAMPVVRITQVDPLRLSFPVPESLVPLVHTDTPVTVHVPSLN 296

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
               + F   I +     S     ++TQ           L   +   EL+ G  A V F 
Sbjct: 297 ----RTFDGKIWRFTGKTSDVTRTMETQ-----------LLVPNPRFELKPGMLASVEFV 341

Query: 417 AKNT 420
               
Sbjct: 342 LARR 345



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/126 (10%), Positives = 41/126 (32%), Gaps = 5/126 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFLN 121
           G +K+  V+ G  + +G  L   E  E  + +     ++   R  I    +     + + 
Sbjct: 95  GYVKRIDVDIGDAVKEGQVLAVLEVPELEEDLARAHAAVLRARERIRLVSSNIRRAEAIA 154

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY--RSLKMKLTRMRSIYLNRL 179
            +  +  +   S  +   + + +     ++      ++    R     +           
Sbjct: 155 RQAALTYQRMYSVNQTTPNLVAQQEVDLAQSQADATAAELSSRQAAALVAEQELAEAQAE 214

Query: 180 DLENKS 185
           +L+ ++
Sbjct: 215 ELKART 220


>gi|47225968|emb|CAG04342.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1114

 Score = 56.9 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 80/225 (35%), Gaps = 4/225 (1%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
               Q+   T L + + +   +L  L    ++  +   D  +  +  L   Y   + A +
Sbjct: 755 REEKQVPINTALRSSDRLPAHELAALLDSELEAQKRKQDVAQQQIRTLKRSYTEAQDAVD 814

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             E  +     K  S  +++     +      ++KL + RS         +++  LRA L
Sbjct: 815 RHETDIQALQVKLASAMAEILASEEAVTRMRNELKLEQERSKEQEEEHSRSET-TLRAQL 873

Query: 193 SSHQKDLTMMK-NLFEKNAVSQN--DLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
              +  L  ++ +L E+N   ++       +R   +    L+E + E    L    E   
Sbjct: 874 KESEDRLREVEASLLERNQALRHLERQQALQRDHMREIQRLQERLQEVTARLNATEEGQV 933

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                  +  + +    E+ ++     +++    +K  + + + +
Sbjct: 934 LKEERLRSQRQTLQESHEKEKQNLCKRLAEAENAQKELQNRVVEA 978



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 80/222 (36%), Gaps = 22/222 (9%)

Query: 90   IETTDLIDLKKVSIKNLR-------CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
             E  D +D  +  I+ L+         I   + A+  + N+  + ++  + +EE+     
Sbjct: 807  TEAQDAVDRHETDIQALQVKLASAMAEILASEEAVTRMRNELKLEQERSKEQEEEHSRSE 866

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                +   +     +  V  SL  +   +R +   +    +    ++ L    Q ++T  
Sbjct: 867  TTLRAQLKES-EDRLREVEASLLERNQALRHLERQQALQRDHMREIQRLQERLQ-EVTAR 924

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLE-----LRENIHEQKNMLRHINELYDEANLEFAN 257
             N  E+  V + +  + +R   + + E     L + + E +N  + +     EA  +   
Sbjct: 925  LNATEEGQVLKEERLRSQRQTLQESHEKEKQNLCKRLAEAENAQKELQNRVVEAEEQVEA 984

Query: 258  YLK--------EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             L+        E   ++++ Q   A +   +  L +   +  
Sbjct: 985  LLRGKQGSAGKECWEEMQKLQGELAQKTDMVESLRENVRRLE 1026



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/250 (12%), Positives = 71/250 (28%), Gaps = 30/250 (12%)

Query: 53   EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
            E ++  ++   +  + +        + +    L  E   + +  +    S   LR  +  
Sbjct: 817  ETDIQALQVKLASAMAEILASE-EAVTRMRNELKLEQERSKEQEEEHSRSETTLRAQLKE 875

Query: 113  EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM- 171
             +  L  +  +  +LE+    R  +    L + H    +     +  V   L        
Sbjct: 876  SEDRLREV--EASLLERNQALRHLERQQALQRDHMREIQRLQERLQEVTARLNATEEGQV 933

Query: 172  ---RSIYLNRLDLENKSSLLRALL-SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
                 +   R  L+      +  L     +     K L  +   ++  +    R    S 
Sbjct: 934  LKEERLRSQRQTLQESHEKEKQNLCKRLAEAENAQKELQNRVVEAEEQVEALLRGKQGSA 993

Query: 228  LE----------------------LRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +                      LREN+   +    H+     E   +     +E+++ 
Sbjct: 994  GKECWEEMQKLQGELAQKTDMVESLRENVRRLEEEKGHLTCRCQELLNQIVEADREVNKF 1053

Query: 266  LEQNQRTFAD 275
              + +   AD
Sbjct: 1054 RNRLETEEAD 1063


>gi|317054303|ref|YP_004118328.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
 gi|316952298|gb|ADU71772.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
          Length = 378

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 4/204 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+K+   +   +I QG  L   +D      +D  K  +     HI T KS LD
Sbjct: 66  ITPQVTGIVKEVTNQQNREIKQGEMLFRLDDTRYQARVDRLKADLATAIAHIQTLKSQLD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +      R+  L D+      + ++V  +  S +  + +  L +   +  + 
Sbjct: 126 EAIANTTNVSAE---RDRLLKDYQRYLQGSKARVNPFSESDIDNARQNYLAQDALVKSSV 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            +     S L + ++  Q  +  ++  L E        + +     Y + + +R   +  
Sbjct: 183 AEQAQIKSQLDSTVNGEQSQIVSLRAQLAEAQYNLDQTVVRAPSDGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKE 261
              LR +     E   +     ++
Sbjct: 243 ALPLRPVMIFIPEQKRQIIAQFRQ 266


>gi|261341417|ref|ZP_05969275.1| macrolide efflux protein MacA [Enterobacter cancerogenus ATCC
           35316]
 gi|288316734|gb|EFC55672.1| macrolide efflux protein MacA [Enterobacter cancerogenus ATCC
           35316]
          Length = 395

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 86/281 (30%), Gaps = 34/281 (12%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK--NAVSQNDLNQQERI 222
              L   R   + R+++  + S     L     D      L  +  +   +NDL   E  
Sbjct: 49  NAVLATGRIDAIERVNVGAQVSGQVKSLKVKLGDRVTKGQLIAEIDDVPQRNDLRNAEAA 108

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL--KEISRDLEQNQRTFADEMSKL 280
           +     +L+    + K             N + ++    +     L   +   +   +KL
Sbjct: 109 LNVVKADLQAKQAQLKQASLRFKRQRQMLNEDASSREDFETAETTLASTRAELSALNAKL 168

Query: 281 TILEKTRE-------QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIR 331
              +   +          +++P+ G ++             SQ    I+  +   +  I+
Sbjct: 169 VQAQIDVDKKKVDLGYTKVVAPMDGIVIAV-VTQQGQTVNSSQSAPTIIKLARLDVMTIK 227

Query: 332 AKVTPKQIQHVKKGYTATVRFPHY--ADIREKKFKAIIEKIDPIISQQDNNLQTQE---- 385
           A+++   I  +  G  A  RF  +   D         +E     + + D+   +      
Sbjct: 228 AQISEADITRISPGQKA--RFTIFSEPDKHYDATLRTVELAPESVMKDDSLASSSSSSGS 285

Query: 386 -------YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                  YY  +L + +     N + +     A+V   A  
Sbjct: 286 GTSNASVYYNALLDVPNPE---NRLRIA--MTAQVTLLAGE 321



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 55/129 (42%), Gaps = 11/129 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G I   + V  + +  SG +K  +V+ G ++ +G  +   +D+   + +   
Sbjct: 47  IENAVLATGRIDAIERV-NVGAQVSGQVKSLKVKLGDRVTKGQLIAEIDDVPQRNDLRNA 105

Query: 100 KVSIKNLRCHIDTEKSALDFLN----------NKYDVLEKAFESREEQLLDFLGKYHSTC 149
           + ++  ++  +  +++ L   +          N+     + FE+ E  L     +  +  
Sbjct: 106 EAALNVVKADLQAKQAQLKQASLRFKRQRQMLNEDASSREDFETAETTLASTRAELSALN 165

Query: 150 SKVFNYGIS 158
           +K+    I 
Sbjct: 166 AKLVQAQID 174


>gi|83591436|ref|YP_425188.1| secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
 gi|83574350|gb|ABC20901.1| Secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
          Length = 321

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 56/175 (32%), Gaps = 10/175 (5%)

Query: 28  IIGLITWSILLPI------EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           ++G   W     +      E  V  SG I  E   + + +P  G I+   +E G+ +  G
Sbjct: 15  VVGGGGWLAWNRLMTPRLPEGIVVGSGRI--EAREITLAAPLGGRIETVLIEEGAVVEAG 72

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            PL   +       +   ++     +       + L           +  E     +L  
Sbjct: 73  QPLARIDSPTLAPALSEARMRAAGAQAAQAEIAAPLAEAEAAMAAAHQEME--RALVLQS 130

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             +      +    G  +   +L     R  +I   +   E + S L+AL+   +
Sbjct: 131 RRQMSRQSVEQRRQGEEAARVALAEITARAEAIDREKTLAEAEVSRLKALMEGAE 185


>gi|254489617|ref|ZP_05102819.1| secretion protein HlyD [Roseobacter sp. GAI101]
 gi|214041787|gb|EEB82428.1| secretion protein HlyD [Roseobacter sp. GAI101]
          Length = 271

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 79/257 (30%), Gaps = 25/257 (9%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
           F  +Y           I S    +   ++  R   + +  L  K       ++       
Sbjct: 25  FAREYDCLMDPSLVVEIGSAEAGIIESISVQRGDLVTQGQLVAKLESGAEQVALDYARAR 84

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
                  + A S+ DL   E    K   EL       + ++      +++A LE      
Sbjct: 85  ATDTSPIEIAQSRIDLLASEAERAK---ELGAKKLVPQAVVDSAVSQHEQAILELRQ--- 138

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                  + ++  A         +    ++ I +P+ G ++  +      Y     P+++
Sbjct: 139 ------AEFEKRLAALDETRVAAQ--LARRDIHAPVDGIVIT-RMIGPGEYVFAQAPIIQ 189

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           I       +I   +       VK G  A V+           ++A +  ID +     + 
Sbjct: 190 IA-RIDPLHIEVFLPTDMFNTVKMGQMAKVKPAA---PIGGHYEAEVIAIDRVFDAASDT 245

Query: 381 LQTQEYYEVILKITDLA 397
                 + V L++ +L 
Sbjct: 246 ------FGVRLRLDNLG 256



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 1/126 (0%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
           VVEI S  +GII+   V+ G  + QG  +   E       +D  +    +    I+  +S
Sbjct: 38  VVEIGSAEAGIIESISVQRGDLVTQGQLVAKLESGAEQVALDYARARATD-TSPIEIAQS 96

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            +D L ++ +  ++    +                 +     +   + L        +  
Sbjct: 97  RIDLLASEAERAKELGAKKLVPQAVVDSAVSQHEQAILELRQAEFEKRLAALDETRVAAQ 156

Query: 176 LNRLDL 181
           L R D+
Sbjct: 157 LARRDI 162


>gi|94500792|ref|ZP_01307321.1| putative cation efflux system protein [Oceanobacter sp. RED65]
 gi|94427114|gb|EAT12095.1| putative cation efflux system protein [Oceanobacter sp. RED65]
          Length = 508

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 69/187 (36%), Gaps = 20/187 (10%)

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR---EQKTILSPIAGT 299
            +    +E  L   +    +      N R      + +  L K +   +  T  +P +G 
Sbjct: 155 QLVNAQEEFLLALKSNNASLLEASLDNLRALNFPQATIQALRKDKTVKQTVTFRAPQSGV 214

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +   Q      +   S+ LM IV +    ++ A+V   Q+  +K+G   +V    + D  
Sbjct: 215 LENLQIR-EGYFVGPSKTLMSIV-NLDKVWVEAEVFQSQLHWLKQGLAVSVALHGFDD-- 270

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             K    ++ I P ++ Q+          V +       ++   +++ G  A+V F  ++
Sbjct: 271 --KLNGQVDYIYPQLNMQNRTG------RVRIV-----LNNPQQKIKAGMYADVTFATQS 317

Query: 420 TTLAQEI 426
           +     +
Sbjct: 318 SKAVTYV 324



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 46/124 (37%), Gaps = 7/124 (5%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVE-NGSQILQGTPLLTFEDIETT 93
            P+ +++++SG  + + N   I+       G ++K  V+  G+ + +  PL      +  
Sbjct: 100 GPLSMTLTASG--IVQFNEEAIQHIHPRVEGWVEKLHVKAVGNPVEKNQPLYDLYSPQLV 157

Query: 94  DLIDLKKVSIKNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +  +   +++K+     ++     L  LN     ++   + +  +         S   + 
Sbjct: 158 NAQEEFLLALKSNNASLLEASLDNLRALNFPQATIQALRKDKTVKQTVTFRAPQSGVLEN 217

Query: 153 FNYG 156
               
Sbjct: 218 LQIR 221


>gi|77465377|ref|YP_354880.1| HlyD family membrane fusion protein [Rhodobacter sphaeroides 2.4.1]
 gi|77389795|gb|ABA80979.1| Membrane fusion protein, HlyD family [Rhodobacter sphaeroides
           2.4.1]
          Length = 425

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 63/193 (32%), Gaps = 1/193 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + ++V ++G +     V E+ S  SG +   +V+   ++  G PL   +D      +   
Sbjct: 67  LVVTVMATGTVQPTTQV-EVSSELSGTLAAVEVDYNDEVAVGQPLARLDDTRLKAQVANA 125

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S++     ++  ++        Y       +      LD +    +         I+ 
Sbjct: 126 EASLEAAEGRLEQARATALEAAENYRSRSALDQRGVAAHLDLVATEAAHKRAESEVKIAE 185

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             R+L      ++ + L +  + +    +    ++    +               DL + 
Sbjct: 186 ADRTLAAANLEVQRVDLAKAVIRSPIRGIVLDRAAEAGQIVASSLNTPVLFTLAEDLTRM 245

Query: 220 ERIVYKSTLELRE 232
           E  V     ++  
Sbjct: 246 ELRVDIDEADIGR 258



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 18/205 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E+    +               R +    D    E A+   E    + +  RT A   
Sbjct: 135 RLEQARATALEAAENYRSRSALDQRGVAAHLDLVATEAAHKRAESEVKIAEADRTLAA-- 192

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHS-KLTYIRAKV 334
           + L +      +  I SPI G ++  ++  +      S   P++  +        +R  +
Sbjct: 193 ANLEVQRVDLAKAVIRSPIRGIVLD-RAAEAGQIVASSLNTPVLFTLAEDLTRMELRVDI 251

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               I  V+ G  A+ +   Y       FKA I ++     +  + + T   Y+ +L + 
Sbjct: 252 DEADIGRVRVGNRASFKVDAYPGR---SFKAEIVQV-RYAPETTDGVVT---YKAVLSVD 304

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
           +         LR G  A    T   
Sbjct: 305 NGERL-----LRPGMTATATITVAE 324


>gi|295136450|ref|YP_003587126.1| efflux transporter, MFP component, RND family protein [Zunongwangia
           profunda SM-A87]
 gi|294984465|gb|ADF54930.1| efflux transporter, MFP component, RND family protein [Zunongwangia
           profunda SM-A87]
          Length = 417

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 102/316 (32%), Gaps = 80/316 (25%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +  +G ++    +  + +   G +++  VE+G+ + +G P+L   + +            
Sbjct: 62  IPVNGVVMPITTI-YLDALEGGRVEEKFVEDGAMMKKGEPILRLSNTD------------ 108

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                  LE +  ++E Q+ + L +   T +      I  +   
Sbjct: 109 -----------------------LELSLVNQETQVYNLLTQMQRTQNASRENTIGKL--- 142

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                              N+ + +++ L   ++   + K LFEK AV++ +        
Sbjct: 143 -------------------NQLTEVKSSLREAERRYKLNKKLFEKGAVAEQEYL------ 177

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                E R N + QK+ L     +  + ++       +     E+ ++        L ++
Sbjct: 178 -----ETRNNYNYQKDRLALTERVLQQDSISSKQENVQARESYEKTRKA-------LELM 225

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-VPHSKLTYIRAKVTPKQIQHV 342
            K  E   + +P+ G +    +        + + L +I V       +   V    I  +
Sbjct: 226 RKKVEDLIVRAPVDGQLTSLDA-EIGQSKSKGERLGQIDVISGYKVRVD--VDEHYISRI 282

Query: 343 KKGYTATVRFPHYADI 358
             G   +  F      
Sbjct: 283 YAGQQGSFNFDGKNYT 298


>gi|255620090|ref|XP_002540078.1| Cobalt-zinc-cadmium resistance protein czcB, putative [Ricinus
           communis]
 gi|223499415|gb|EEF22305.1| Cobalt-zinc-cadmium resistance protein czcB, putative [Ricinus
           communis]
          Length = 257

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 60/197 (30%), Gaps = 18/197 (9%)

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
             +  LEL +  +E++  L       ++  L+    L+E   +L+ +++      +    
Sbjct: 2   AAQKRLELAKITYEREKRLWEEKISAEQDYLQARQVLQEAEINLQSSKQKLQSIGAS-VG 60

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                    I SPI G I   Q  S+       + +  I       +    +  K +  V
Sbjct: 61  SSNNLTHYAIKSPIDGVITDKQI-SAGQVLNGDEGIFVIA-DLSTVWAEMTIYAKDVGAV 118

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G    V+               +  +  ++ +Q               I  +  ++ +
Sbjct: 119 KVGQKVAVKSSASVAQTM----GTVSYVGALVGEQSRTA-----------IARVVLNNPD 163

Query: 403 IELRNGFPAEVLFTAKN 419
                G P  +   A  
Sbjct: 164 NVWLPGLPVNIELQADE 180


>gi|218887247|ref|YP_002436568.1| secretion protein HlyD [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758201|gb|ACL09100.1| secretion protein HlyD family protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 357

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 100/292 (34%), Gaps = 10/292 (3%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L      R  ++L   G   +  + V       + R +     R+ +       LEN S 
Sbjct: 47  LAFKDAERVARVLAREGDRLAPGALVAVLETDRLDREISRAKARVAAQAAALARLENGSR 106

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                 +    D   ++   +    + + L            ++ + +         +  
Sbjct: 107 PQEKRRARADADAAAVE--LDNARRTYDRLRALSGTGAAREQDVDDALAAHDRAAARLRV 164

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +  L      +E   D+++ +   A + + L +LE+ R    + +P +G +V ++  
Sbjct: 165 AQAQLGLVEEGPRRE---DIDEARAALAAQRADLAVLEQRRADSELRAPSSG-VVRSRLL 220

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
              + A   +P+   V  +   ++RA +T  Q+  V +G  A V          +  +  
Sbjct: 221 EPGDMASAQRPVCT-VAITDPKWVRAYLTETQLGRVHEGMPAEV---AIDARPGQPLEGW 276

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +  I P       N++T E    ++    +   D +  LR G PA V     
Sbjct: 277 LGFISPTAEFTPRNVETPELRTSLVYEARVFVRDPDDVLRLGMPATVTLREG 328


>gi|170721975|ref|YP_001749663.1| RND family efflux transporter MFP subunit [Pseudomonas putida W619]
 gi|169759978|gb|ACA73294.1| efflux transporter, RND family, MFP subunit [Pseudomonas putida
           W619]
          Length = 430

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 60/156 (38%), Gaps = 4/156 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +    N V ++S  +G + K   + G Q+  G  L   +       +   + ++  
Sbjct: 83  ALGTVTA-TNTVNVRSRVAGELVKIHFKEGQQVKAGDLLAEIDPRSYRIALQQAEGTLAQ 141

Query: 106 LRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            R  +   +  L     L  +  + ++  ++ E Q+  F G   +  ++V +  ++  + 
Sbjct: 142 NRAQLKNAQVDLARYKGLYAEDSIAKQTLDTSEAQVAQFQGLVKTNQAQVNDARLNLDFT 201

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            ++  ++    +    L     ++   AL+   Q +
Sbjct: 202 QIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTE 237


>gi|118498173|ref|YP_899223.1| membrane fusion protein [Francisella tularensis subsp. novicida
           U112]
 gi|187931050|ref|YP_001891034.1| membrane fusion protein [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|194324346|ref|ZP_03058119.1| efflux transporter, RND family, MFP subunit [Francisella tularensis
           subsp. novicida FTE]
 gi|208780190|ref|ZP_03247532.1| efflux transporter, RND family, MFP subunit [Francisella novicida
           FTG]
 gi|254374981|ref|ZP_04990461.1| efflux protein [Francisella novicida GA99-3548]
 gi|118424079|gb|ABK90469.1| membrane fusion protein [Francisella novicida U112]
 gi|151572699|gb|EDN38353.1| efflux protein [Francisella novicida GA99-3548]
 gi|187711959|gb|ACD30256.1| membrane fusion protein [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|194321411|gb|EDX18896.1| efflux transporter, RND family, MFP subunit [Francisella tularensis
           subsp. novicida FTE]
 gi|208743839|gb|EDZ90141.1| efflux transporter, RND family, MFP subunit [Francisella novicida
           FTG]
 gi|332678901|gb|AEE88030.1| Putative Co/Zn/Cd efflux system membrane fusion protein
           [Francisella cf. novicida Fx1]
          Length = 457

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 69/202 (34%), Gaps = 26/202 (12%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI---------TWSILLPIEISVSSS-------GEILNE 53
           K+    ++   TL+   GI G             +  +P  ++V+SS        +++N 
Sbjct: 65  KKTASIAIVVATLILFGGIFGFAEFIQSMIKKGMAAYVPQPVAVTSSVVEKTDWKQVINT 124

Query: 54  -DNVVEIKS-----PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
                 ++S        GI+ +   ++G ++ +G  L   +  +    ++    ++K  +
Sbjct: 125 IGEAQAVQSTAISSQSGGIVSEIHFKSGQEVKKGDLLFKLDTSQLKANLEEALSNLKLAK 184

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                 K   + L  +    +++ +      L  L +  +  S++    + + +      
Sbjct: 185 ----ITKDRYNKLVEQKATSKESADKANADYLSALAQVQNIESQIGFKEVRAPFDGKIGI 240

Query: 168 LTRMRSIYLNRLDLENKSSLLR 189
                  Y N  D     + + 
Sbjct: 241 RNISLGQYFNNGDNAATLTTID 262



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 71/202 (35%), Gaps = 25/202 (12%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S  ++ + + +    T +L+ N+ E  + L  + ++  +   +            ++   
Sbjct: 151 SGQEVKKGDLLFKLDTSQLKANLEEALSNL-KLAKITKDRYNKLVEQKATSKESADKANA 209

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLT 328
            +   ++++  +E     K + +P  G I   ++ S   Y         L  I       
Sbjct: 210 DYLSALAQVQNIESQIGFKEVRAPFDGKI-GIRNISLGQYFNNGDNAATLTTI----DPI 264

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQEYY 387
           +I   V   ++  +  G    + F  Y+D    + F   I  I+  I+  + ++  Q  Y
Sbjct: 265 FITFPVPQNKVSMISVGQ--EINF--YSDSYPGETFTGKITAINSFINDSNRSITVQATY 320

Query: 388 EVILKITDLAFSDNNIELRNGF 409
                      ++ + ++  G 
Sbjct: 321 -----------ANPHHKIVAGM 331


>gi|330890509|gb|EGH23170.1| hypothetical protein PSYMO_17578 [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 440

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 54/158 (34%), Gaps = 4/158 (2%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  SV +  E++     V       G++ +F V+    +  G  LL FE+       D+
Sbjct: 191 PVRQSVLAPAEVVPLGGRVVAAPLD-GVVAEFLVKPNQVVKTGDLLLRFENTTLKAQADV 249

Query: 99  KKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            + ++      +             +++ D+L    E +  +          +  +    
Sbjct: 250 AERALGVAEAELKANSQRSFADAESSSRIDLLAARVEQKRAERDYARELLKRSEVRAERD 309

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           GI+    + +     +++        +   + LR  L+
Sbjct: 310 GIAVFADAQRWLGKPVQTGERLLEIADPTQAELRIELA 347



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/128 (10%), Positives = 40/128 (31%), Gaps = 2/128 (1%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +  V  N + +   ++ +      +   +       + E   +AN + +    E S  
Sbjct: 218 VAEFLVKPNQVVKTGDLLLRFENTTLKAQADVAERALGVAEAELKANSQRSFADAESSSR 277

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-P 323
           ++        + ++     +  ++  + +   G  +  +         Q  + L++I  P
Sbjct: 278 IDLLAARVEQKRAERDYARELLKRSEVRAERDGIAVFADAQRWLGKPVQTGERLLEIADP 337

Query: 324 HSKLTYIR 331
                 I 
Sbjct: 338 TQAELRIE 345


>gi|298485834|ref|ZP_07003912.1| probable membrane-fusion protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298159658|gb|EFI00701.1| probable membrane-fusion protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 440

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 54/158 (34%), Gaps = 4/158 (2%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  SV +  E++     V       G++ +F V+    +  G  LL FE+       D+
Sbjct: 191 PVRQSVLAPAEVVPLGGRVVAAPLD-GVVAEFLVKPNQVVKTGDLLLRFENTTLKAQADV 249

Query: 99  KKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            + ++      +             +++ D+L    E +  +          +  +    
Sbjct: 250 AERALGVAEAELKANSQRSFADAESSSRIDLLAARVEQKRAERDYARELLKRSEVRAERD 309

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           GI+    + +     +++        +   + LR  L+
Sbjct: 310 GIAVFADAQRWLGKPVQTGERLLEIADPTQAELRIELA 347



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/128 (10%), Positives = 40/128 (31%), Gaps = 2/128 (1%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +  V  N + +   ++ +      +   +       + E   +AN + +    E S  
Sbjct: 218 VAEFLVKPNQVVKTGDLLLRFENTTLKAQADVAERALGVAEAELKANSQRSFADAESSSR 277

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-P 323
           ++        + ++     +  ++  + +   G  +  +         Q  + L++I  P
Sbjct: 278 IDLLAARVEQKRAERDYARELLKRSEVRAERDGIAVFADAQRWLGKPVQTGERLLEIADP 337

Query: 324 HSKLTYIR 331
                 I 
Sbjct: 338 TQAELRIE 345


>gi|294141054|ref|YP_003557032.1| hypothetical protein SVI_2283 [Shewanella violacea DSS12]
 gi|293327523|dbj|BAJ02254.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 418

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 92/261 (35%), Gaps = 13/261 (4%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +V  +G ++ ED          G +++  ++ G+Q+  G  LL   + +    ++  K  
Sbjct: 61  TVRGTGVLVPEDIRWIATDVE-GRVERILIKAGAQVKMGDLLLELSNPQLVQRLEETKWE 119

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           ++ L      +    D       +  +A    E+   +          ++F  G+ +V +
Sbjct: 120 LEALEAETKAQ----DVEMESELLDRQAAVVIEKLNHERAMLTLKAHDQLFAQGVVAVSK 175

Query: 163 SLKMKLTRMRSIYLNRLDLENKS-----SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
               ++    + Y  R  LE K        L A   +++  L  M+ + ++    Q D  
Sbjct: 176 IAHAEIKIDVNQYEQRWKLETKRLHKREVNLAAQRLAYEARLNRMRRILQR-VQDQVDNL 234

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + +  +     E+   + +Q +   ++      D+   E      +I       + T   
Sbjct: 235 KVKATMDSLVQEMPMELGQQVSSGTNLAKLARRDQYIAEIRIPENQIKDVRLGQKVTIDT 294

Query: 276 EMSKLTILEKTREQKTILSPI 296
             +K+    +  +   I S +
Sbjct: 295 CNNKIAGTVQRIDPAVINSSV 315


>gi|317132361|ref|YP_004091675.1| efflux transporter, RND family, MFP subunit [Ethanoligenens
           harbinense YUAN-3]
 gi|315470340|gb|ADU26944.1| efflux transporter, RND family, MFP subunit [Ethanoligenens
           harbinense YUAN-3]
          Length = 400

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 50/139 (35%), Gaps = 10/139 (7%)

Query: 282 ILEKTREQK---TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
             E   EQ+    I +PI+G I    + +  +++  +  L+ I        +RA+V    
Sbjct: 188 AAESALEQQIPSQITAPISGVITEINA-AVGSFSAPATSLVVIS-DLSGLNLRAQVGQAD 245

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  V  G    +           ++   + ++ P      +   T+   +V++++     
Sbjct: 246 ISQVHTGQNVQISASAAGSGAGGRYTGTVTQVFPAAHSVSDASGTRNVVDVLIRV----- 300

Query: 399 SDNNIELRNGFPAEVLFTA 417
           +  +  L     A+   T 
Sbjct: 301 AKPDKNLLPDMSAQASITT 319


>gi|218258668|ref|ZP_03474989.1| hypothetical protein PRABACTJOHN_00644 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225293|gb|EEC97943.1| hypothetical protein PRABACTJOHN_00644 [Parabacteroides johnsonii
           DSM 18315]
          Length = 352

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 74/211 (35%), Gaps = 25/211 (11%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             + + +  + E  +     EL   I EQ+ + +    LY++  +  +        ++  
Sbjct: 93  QLIVRLEDREYENGIAIDAKELSLEIAEQEQVKQK--ALYEKGGVTLS--------EMRN 142

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +    +        +   E+  + +P  G IV    ++S    +Q +P++ I+      
Sbjct: 143 TEVKVTNARYDYENGKLNLEKMNVKAPFDGVIVDLPHYTSDVRIEQGKPVVGIM-DYARM 201

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           Y+   +    I +VK      +   HY  + E   + +I ++ P IS +    +      
Sbjct: 202 YMDINLPESAIGYVKADQPVYI--THY-TLPEDTIRGVISELSPAISSETRTFKG----- 253

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                  +   +  ++LR G   +       
Sbjct: 254 ------KILIQNEGLKLRPGMFVKADIVVNK 278


>gi|134301317|ref|YP_001121285.1| RND family membrane fusion protein [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134049094|gb|ABO46165.1| membrane fusion protein, RND family [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 457

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 69/202 (34%), Gaps = 26/202 (12%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI---------TWSILLPIEISVSSS-------GEILNE 53
           K+    ++   TL+   GI G             +  +P  ++V+SS        +++N 
Sbjct: 65  KKTASIAIVVATLILFGGIFGFAEFIQSMIKKGMAAYVPQPVAVTSSVVEKTDWKQVINT 124

Query: 54  -DNVVEIKS-----PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
                 ++S        GI+ +   ++G ++ +G  L   +  +    ++    ++K  +
Sbjct: 125 IGEAQAVQSTAISSQSGGIVSEIHFKSGQEVKKGDLLFKLDTSQLKANLEEALSNLKLAK 184

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                 K   + L  +    +++ +      L  L +  +  S++    + + +      
Sbjct: 185 ----ITKDRYNKLVEQKATSKESADKANADYLSALAQVQNIESQIGFKEVRAPFDGKIGI 240

Query: 168 LTRMRSIYLNRLDLENKSSLLR 189
                  Y N  D     + + 
Sbjct: 241 RNISLGQYFNNGDNAATLTTID 262



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 71/202 (35%), Gaps = 25/202 (12%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S  ++ + + +    T +L+ N+ E  + L  + ++  +   +            ++   
Sbjct: 151 SGQEVKKGDLLFKLDTSQLKANLEEALSNL-KLAKITKDRYNKLVEQKATSKESADKANA 209

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLT 328
            +   ++++  +E     K + +P  G I   ++ S   Y         L  I       
Sbjct: 210 DYLSALAQVQNIESQIGFKEVRAPFDGKI-GIRNISLGQYFNNGDNAATLTTI----DPI 264

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQEYY 387
           +I   V   ++  +  G    + F  Y+D    + F   I  I+  I+  + ++  Q  Y
Sbjct: 265 FITFPVPQNKVSMISVGQ--EINF--YSDSYPGETFTGKITAINSFINDSNRSITVQATY 320

Query: 388 EVILKITDLAFSDNNIELRNGF 409
                      ++ + ++  G 
Sbjct: 321 -----------ANPHHKIVAGM 331


>gi|104780167|ref|YP_606665.1| RND family multidrug transporter membrane fusion protein
           [Pseudomonas entomophila L48]
 gi|95109154|emb|CAK13851.1| putative multidrug RND transporter, membrane fusion protein (HylD
           family) [Pseudomonas entomophila L48]
          Length = 387

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 59/172 (34%), Gaps = 15/172 (8%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   + VE++    G++ +  V+ G  + QG  L T +D      +D  +  +   +  +
Sbjct: 62  VLSLHSVEVRPQVEGVLTQVLVKEGQWVKQGDLLATLDDRAIRASLDQARAQLGQTQAQL 121

Query: 111 DTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
              +  L     L+    V ++  + ++  +           + + N  +   Y  +   
Sbjct: 122 QVARVNLKRYQLLSTDDGVSKQTLDQQQALVNQLQATITGDQAAIDNAAVQLSYTRIASP 181

Query: 168 LTRM------------RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           +T              R+     L    +   +    S  Q+ L  +++L +
Sbjct: 182 VTGRVGIRNVDPGNLVRTTDTQGLFSVTQIDPIAVEFSLPQQQLPTLQSLLK 233


>gi|82543989|ref|YP_407936.1| hypothetical protein SBO_1491 [Shigella boydii Sb227]
 gi|81245400|gb|ABB66108.1| putative membrane protein [Shigella boydii Sb227]
          Length = 299

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 27/220 (12%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S +     +  +   +   +S    +L +     +   V+  +L            EL
Sbjct: 44  MQSPWTRDGKIRAEQVSITPQVSGRIVELNIK----DNQLVNAGELLLTIDKTPFQIAEL 99

Query: 231 RENIHEQKNMLRHINELYDEANLE--------FANYLKEISRDLEQNQRTFADEMSKLTI 282
                +       + +  +EAN          FA  L   + +++  Q +     + L  
Sbjct: 100 NAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIFAEELDTANLNVKAMQASVNAAQATLKQ 158

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQ 338
            +    Q  I +P++G +    +    +YA   +PL  +V       I      K+    
Sbjct: 159 TQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR--- 214

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             H+++G  A +          K  +  +  I   I  Q 
Sbjct: 215 --HIREGAPAQITL----YSDNKTLQGHVSSIGRAIYDQS 248



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 15  MSIKTIKYFSIIIVAIVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 70

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 71  ELNIKDNQLVNAGELLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 130

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 131 FAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 170


>gi|332703796|ref|ZP_08423884.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332553945|gb|EGJ50989.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 387

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 78/228 (34%), Gaps = 37/228 (16%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISRDLEQNQRT 272
           + + +R++   + EL     E    LR   EL   +     +    L E +R   +    
Sbjct: 115 VKKGQRLLDIYSPELLATQEEYLVALRAKRELARSSYPGVAKSGETLLEAARRRLELWDI 174

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY-IR 331
              ++ +L    K  +  ++ SP+ G ++  ++       +   PL +I         I 
Sbjct: 175 SQAQIERLERTGKPTKTLSLYSPLDGYVINKEAL-EGMEVRPGMPLYQI--ADLSIVWIE 231

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
                 ++  ++ G  A VR P+  D         +  I P ++ +           V +
Sbjct: 232 GDFYEYEVPFIEIGQQAEVRLPYLPDE---VLFGRVSYIYPYLNVETRT--------VRV 280

Query: 392 KITDLAFSDNNIELRNGF----------------PAEVLFTAKNTTLA 423
           +   + F + ++ L+ G                 PAE L      T+A
Sbjct: 281 R---MEFPNPHVRLKPGMYANVNLNVDLGHRLAVPAEALLDTGTKTVA 325



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 4/119 (3%)

Query: 58  EIKSPFSGIIKKFQV-ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
            I S   G I++  V   G  + +G  LL   DI + +L+  ++  +  LR   +  +S+
Sbjct: 94  TITSKVGGWIERLYVNTTGEFVKKGQRLL---DIYSPELLATQEEYLVALRAKRELARSS 150

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
              +    + L +A   R E       +              S+Y  L   +    ++ 
Sbjct: 151 YPGVAKSGETLLEAARRRLELWDISQAQIERLERTGKPTKTLSLYSPLDGYVINKEALE 209


>gi|327481429|gb|AEA84739.1| RND efflux membrane fusion protein precursor [Pseudomonas stutzeri
           DSM 4166]
          Length = 398

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 73/211 (34%), Gaps = 12/211 (5%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFL 120
            G + +  VE G ++ +  PL   +  +    +D  +  +     ++     E      L
Sbjct: 98  GGKVVERLVEAGDRVRKDQPLARLDPQDVRLQLDGMRAQVAAAEANLRVAKAEYDRYQAL 157

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSK---VFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  V +  F++ +        +     ++     N    +V R+ +  L   R I + 
Sbjct: 158 LGRQLVSQSQFDNADNAYRAATARLQQARAEFDVASNQVDYAVLRATRDGLIAQRRIEVG 217

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           ++    +++ + A     +  + + +   E+  V       QE  V   +   R+   + 
Sbjct: 218 QVVAAGQTAFVLAADGEREVAIDLPEQSLERYRV------GQEVEVELWSQPGRQYRGQI 271

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           + +    +      +   A   +E+  +L Q
Sbjct: 272 RELSPAADAQSRTYSARVAFTEQEVPAELGQ 302



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 18/212 (8%), Positives = 54/212 (25%), Gaps = 28/212 (13%)

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            +++ L E      + + + + +      ++R  +   +  +         A  E+  Y 
Sbjct: 100 KVVERLVEAG----DRVRKDQPLARLDPQDVRLQLDGMRAQVAAAEANLRVAKAEYDRYQ 155

Query: 260 KEISRDL-------------EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
             + R L                        ++  +     +   + +   G I   +  
Sbjct: 156 ALLGRQLVSQSQFDNADNAYRAATARLQQARAEFDVASNQVDYAVLRATRDGLIAQ-RRI 214

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                    Q    ++       +   +  + ++  + G    V        + +     
Sbjct: 215 EVGQVVAAGQT-AFVLAADGEREVAIDLPEQSLERYRVGQEVEVELWSQPGRQYR---GQ 270

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I ++ P    Q         Y   +  T+   
Sbjct: 271 IRELSPAADAQSRT------YSARVAFTEQEV 296


>gi|309795893|ref|ZP_07690307.1| efflux pump membrane protein [Escherichia coli MS 145-7]
 gi|308120554|gb|EFO57816.1| efflux pump membrane protein [Escherichia coli MS 145-7]
          Length = 343

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 87/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+          K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIHLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASAVSGVDALVAQRAAVEADIALTK 203


>gi|218528546|ref|YP_002419362.1| secretion protein HlyD [Methylobacterium chloromethanicum CM4]
 gi|240137140|ref|YP_002961609.1| putative membrane protein, component of efflux system
           [Methylobacterium extorquens AM1]
 gi|218520849|gb|ACK81434.1| secretion protein HlyD family protein [Methylobacterium
           chloromethanicum CM4]
 gi|240007106|gb|ACS38332.1| putative membrane protein, component of efflux system
           [Methylobacterium extorquens AM1]
          Length = 343

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 24/224 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWS-----ILLPI-------------EISVSSSGEI 50
           ++R  P    R  LL+I+   G    +         +             +    S+G I
Sbjct: 1   MRRTRPGPRARGALLAILLATGFAVAAPPPSLAQSRLKQLIDRLRGQKMPDGIAKSNGRI 60

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
                 V++ + ++G I K  V+ G ++  G  + T    ET   +   +  +   +  +
Sbjct: 61  EATQ--VDVAAKYAGRISKLLVKEGDEVSAGQVVATISSPETEAQLRGAQSQVLRAKKSL 118

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLL---DFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             E  AL    N       A  SR ++L+       +             +++  +   +
Sbjct: 119 -AEAVALIAQRNSDLTFADADYSRGKELVGKGYMAKQIFDQRKAKAEAAKAALDAAKAQE 177

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                ++     D++   ++L  L+    +D  +   L  +  V
Sbjct: 178 DQAKFAVQSAEADVQRLEAMLVDLVLRAPRDGRVQYRLAREGEV 221


>gi|325114202|emb|CBZ49759.1| conserved hypothetical protein [Neospora caninum Liverpool]
          Length = 1337

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 74/200 (37%), Gaps = 9/200 (4%)

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           GTPL   +              IK L+  ++  +  L     +     +  E RE  L  
Sbjct: 236 GTPLSDLDGAAAAGN------EIKRLQAEVEELRGQLAEQERRAAEQVRELEKRERDLCG 289

Query: 141 FLGKYHSTCSKVFNYGISSVY--RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            + +     ++    G S  +  + L+      R +     DL  K   L+  L  HQK 
Sbjct: 290 RVQELEQRLAQTQPNGFSEAFDTQELQQLQHEHRKLQQREQDLLEKERELQRQLEQHQKQ 349

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  +    ++   S+   N  ++  +++  E R ++   +  ++ + +L+ EA    A  
Sbjct: 350 LEELHREVKELHRSEAQTNGVDK-HHEADAEQRAHVERLERKVKDVEKLHREAAERDAMR 408

Query: 259 LKEISRDLEQNQRTFADEMS 278
           ++ +  +    +R  A   S
Sbjct: 409 IRALEEENNLLKRATAASAS 428



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/211 (10%), Positives = 71/211 (33%), Gaps = 9/211 (4%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
                       ++  + + H    ++           L+ A  +   ++     +    
Sbjct: 205 PTPAAADGRGAALAAGSPKAHAFA-RAGKRLSGTPLSDLDGAAAAG-NEIKRLQAEVEEL 262

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA---LLSSHQKDLTMMKNL 205
             ++      +    ++    R R +     +LE + +  +      +   ++L  +++ 
Sbjct: 263 RGQLAEQERRAA-EQVRELEKRERDLCGRVQELEQRLAQTQPNGFSEAFDTQELQQLQHE 321

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--EFANYLKEIS 263
             K    + DL ++ER + +   + ++ + E    ++ ++    + N   +      E  
Sbjct: 322 HRKLQQREQDLLEKERELQRQLEQHQKQLEELHREVKELHRSEAQTNGVDKHHEADAEQR 381

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             +E+ +R   D + KL      R+   I +
Sbjct: 382 AHVERLERKVKD-VEKLHREAAERDAMRIRA 411


>gi|289666385|ref|ZP_06487966.1| membrane fusion protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 409

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 49/126 (38%), Gaps = 3/126 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +    +  + +  +G +++  +E G ++ QG  + T + ++      L    +   R  +
Sbjct: 79  VVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDADAQRTLSASQLSAARSQV 138

Query: 111 DTEKSALDFLNNKYDVLEKAFESR---EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           D  ++ L   N     L+    ++     Q      +  +  +++ N   +    S ++ 
Sbjct: 139 DNMQAQLAVANADATRLQSLVGAQLVSRSQYEQATAQRDALRAQLQNAQRNVQVASDQLA 198

Query: 168 LTRMRS 173
           +  +RS
Sbjct: 199 IAGIRS 204



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 81/272 (29%), Gaps = 38/272 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V    +++V   +  K+  +      R++     + L  L +  Q+ L            
Sbjct: 79  VVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDADAQRTL------------ 126

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFANYLKE-ISRDLEQN 269
           S + L+     V     +L     +   +   +  +L   +  E A   ++ +   L+  
Sbjct: 127 SASQLSAARSQVDNMQAQLAVANADATRLQSLVGAQLVSRSQYEQATAQRDALRAQLQNA 186

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--------LMKI 321
           QR       +L I     +   + +P AG +V  ++                    +  I
Sbjct: 187 QRNVQVASDQLAIAGIRSDFNVVRAPFAG-VVTAKAAQPGEIVSPLSAGGGFTRTGIGTI 245

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V   +   I  +V    I  V+           Y + +         ++  II   D   
Sbjct: 246 V-DMESLEIEVEVGESYIGRVQPKMPVEAVLNAYPEWKIPC------EVIAIIPTADRGK 298

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            T     V +++   A    +  +       V
Sbjct: 299 AT-----VKVRV---ALKVKDARIVPEMGVRV 322


>gi|253568015|ref|ZP_04845426.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251842088|gb|EES70168.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 409

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 73/213 (34%), Gaps = 12/213 (5%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHE---QKNMLRHINELYDEANLEFANYLKEISRD 265
             +++ D    +  +            E   QK        L+D++ +   +Y ++   +
Sbjct: 86  QLIAEMDRVTLQSELASQQATYDGAKAEFEYQKKNYERSKGLHDKSLISDTDY-EQALYN 144

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIV 322
            ++ +  F    + L   E+     TI SPI G ++  +   +            L  I 
Sbjct: 145 YQKAKSAFDSSKASLAKAERNLSYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIA 203

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  + A V    I  +++G  A+     Y +     F  ++ +I  +     ++  
Sbjct: 204 ADLTQMQVVADVDEADIGGIEEGQRASFTVDAYPND---VFDGVVTQI-RLGDASSSSSA 259

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +     V+     ++  + +++L+    A V  
Sbjct: 260 SSSTSTVVTYEVVISAPNPDLKLKPRLTANVTI 292



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 43/105 (40%), Gaps = 1/105 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII K  V+  S + +G  +   + +     +  +
Sbjct: 45  ISNSVTATGTIEPVIEV-EVGTQVSGIIDKIYVDYNSVVTKGQLIAEMDRVTLQSELASQ 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           + +    +   + +K   +     +D    +    E+ L ++   
Sbjct: 104 QATYDGAKAEFEYQKKNYERSKGLHDKSLISDTDYEQALYNYQKA 148


>gi|153011415|ref|YP_001372629.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151563303|gb|ABS16800.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 410

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 46/139 (33%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +      V I     G + +  V    ++  G  L   +D +    ++  +  I  +   
Sbjct: 68  VTAAFRTVTILPEIGGRVDEVYVSRNQKVKAGEALFKLDDSKQKAALETARKRIAEIDAE 127

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +   KS L   + +    E AF   +  +   L       + V    I  +      K +
Sbjct: 128 MVVAKSDLVAADARIKQGEIAFVQAQNDVNTQLELQRRNPNIVARKDIERLQSIADGKGS 187

Query: 170 RMRSIYLNRLDLENKSSLL 188
            + +   ++  LE K + L
Sbjct: 188 ELAAATASKQTLETKITSL 206


>gi|110597781|ref|ZP_01386065.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
 gi|110340688|gb|EAT59168.1| Secretion protein HlyD [Chlorobium ferrooxidans DSM 13031]
          Length = 320

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               I  SVS++G +  E+ V  IKS   G +++  V+ G  + +GT L      E   L
Sbjct: 42  ARGSISSSVSTTGAVEPENRVK-IKSSVGGRVEEVLVDEGQLVSKGTVLAMLSSTERAAL 100

Query: 96  IDLKKVS 102
           +D  ++ 
Sbjct: 101 LDAARLQ 107



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 63/176 (35%), Gaps = 24/176 (13%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTR------EQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           +   L   +R    + ++L    +        ++  +++P+ G ++  +S +       S
Sbjct: 88  VLAMLSSTERAALLDAARLQGKSEQSYWNNVYKKTAVIAPMDGQVI-VRSVNPGQTVTTS 146

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L  +   S    ++A V    I  VK G  A +    Y +IR      ++E I     
Sbjct: 147 DSLFVL---SDHLIVKAYVDETDIGRVKTGQKAVIGLDAYPEIR---VNGVVEHIYYESR 200

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
            Q+N       Y V +    +         R+G  A +    +  + A  ++ P+ 
Sbjct: 201 LQNN----VSIYNVDVIPDRI-----PEVFRSGMSANIRIIVQENSRA--LLLPLR 245


>gi|320459464|dbj|BAJ70085.1| ABC transporter permease component [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 1210

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 77/226 (34%), Gaps = 26/226 (11%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E    ++  K  + + R  +D  ++ L     K +      +    Q+   L       +
Sbjct: 383 EARTQLESGKTQLTSARKQLDAAQTELTANRTKIEQGITQIDQGVAQIDQMLSMIQQADN 442

Query: 151 KVFN------------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS-HQK 197
            +                I  +   L + L  + SI   R  L  K + L+    S  Q+
Sbjct: 443 LLAQLDPNIDFNSPTWQAIKQLLARLGITLPEVPSISELRQQLAAKQTELQTQRDSLAQQ 502

Query: 198 DLTMMKNLFEKNAVSQNDLNQQ-------ERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + + L E  A +Q+ L+QQ       E+ V     +L     E +     +     +
Sbjct: 503 KADLQRTLNETIAPAQSTLDQQNAQLTAKEQEVAAGEAQLNTKSAELEANAATLETQSAQ 562

Query: 251 ANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              + A        L+E  R L++ ++  AD  +KL   +   + K
Sbjct: 563 LEAQAAQLASGKQQLEEGERQLKEGEQQLADGKAKLDDAQSALDAK 608


>gi|307309745|ref|ZP_07589396.1| secretion protein HlyD family protein [Sinorhizobium meliloti
           BL225C]
 gi|306899847|gb|EFN30471.1| secretion protein HlyD family protein [Sinorhizobium meliloti
           BL225C]
          Length = 409

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 58/164 (35%), Gaps = 1/164 (0%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +      V I    +G + +  V+   ++  G PL   +D E    ++  +  +  +   
Sbjct: 68  VTAVFRTVTIMPESTGRVAEVYVDLNEKVSAGAPLFRLDDSEQRAALETARRRVAEIEAE 127

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
               +S L   +      E  +     +L   +       + V    I  +  ++  +  
Sbjct: 128 AIVAQSELASADGLIAQAEGDYLQALNELETQVELNQRNPNIVARREIERLQVAVDGRDG 187

Query: 170 RMRSIYLNRLDLENK-SSLLRALLSSHQKDLTMMKNLFEKNAVS 212
              +   N+  LE K +SLL A  +S +  LT  +   +K  V 
Sbjct: 188 ARAASISNKRTLETKIASLLPAQKASAEAALTQAQVELDKTIVR 231



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/202 (10%), Positives = 62/202 (30%), Gaps = 31/202 (15%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +   +      R  ++   L +  S  + +F    S    +L+    R+  I    +  
Sbjct: 72  FRTVTIMPESTGRVAEVYVDLNEKVSAGAPLFRLDDSEQRAALETARRRVAEIEAEAIVA 131

Query: 182 ENKSSLLRALLSSHQ-------KDLTMMKNLFEKN--AVSQNDLNQQERIVYKSTLELRE 232
           +++ +    L++  +        +L     L ++N   V++ ++ + +  V         
Sbjct: 132 QSELASADGLIAQAEGDYLQALNELETQVELNQRNPNIVARREIERLQVAVDGRDGARAA 191

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +I  ++ +   I  L                          A   + LT  +   ++  +
Sbjct: 192 SISNKRTLETKIASLLP---------------------AQKASAEAALTQAQVELDKTIV 230

Query: 293 LSPIAGTIVYNQSFSSSNYAQQ 314
            +  AG +      +  +    
Sbjct: 231 RAGTAGVVQQFALRA-GDIVNP 251


>gi|289669287|ref|ZP_06490362.1| membrane fusion protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 409

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 49/126 (38%), Gaps = 3/126 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +    +  + +  +G +++  +E G ++ QG  + T + ++      L    +   R  +
Sbjct: 79  VVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDADAQRTLSASQLSAARSQV 138

Query: 111 DTEKSALDFLNNKYDVLEKAFESR---EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           D  ++ L   N     L+    ++     Q      +  +  +++ N   +    S ++ 
Sbjct: 139 DNMQAQLAVANADATRLQSLVGAQLVSRSQYEQATAQRDALRAQLQNAQRNVQVASDQLA 198

Query: 168 LTRMRS 173
           +  +RS
Sbjct: 199 IAGIRS 204



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 81/272 (29%), Gaps = 38/272 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V    +++V   +  K+  +      R++     + L  L +  Q+ L            
Sbjct: 79  VVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDADAQRTL------------ 126

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFANYLKE-ISRDLEQN 269
           S + L+     V     +L     +   +   +  +L   +  E A   ++ +   L+  
Sbjct: 127 SASQLSAARSQVDNMQAQLAVANADATRLQSLVGAQLVSRSQYEQATAQRDALRAQLQNA 186

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--------LMKI 321
           QR       +L I     +   + +P AG +V  ++                    +  I
Sbjct: 187 QRNVQVASDQLAIAGIRSDFNVVRAPFAG-VVTAKAAQPGEIVSPLSAGGGFTRTGIGTI 245

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V   +   I  +V    I  V+           Y + +         ++  II   D   
Sbjct: 246 V-DMESLEIEVEVGESYIGRVQPKMPVEAVLNAYPEWKIPC------EVIAIIPTADRGK 298

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            T     V +++   A    +  +       V
Sbjct: 299 AT-----VKVRV---ALKVKDARIVPEMGVRV 322


>gi|189461586|ref|ZP_03010371.1| hypothetical protein BACCOP_02245 [Bacteroides coprocola DSM 17136]
 gi|189431696|gb|EDV00681.1| hypothetical protein BACCOP_02245 [Bacteroides coprocola DSM 17136]
          Length = 409

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 68/216 (31%), Gaps = 23/216 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +DL   +     +  E      E +      NE   +  L      +E   + ++++ ++
Sbjct: 98  SDLQSAQATYNGAKAEY-----EYQKKQYERNEQLHKKQLISDTDYEESLYNYQRSRSSY 152

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYI 330
               ++L   E+     TI SPI G +                    L  I        +
Sbjct: 153 EQSKAELAKAERNLSYATITSPIDGIVTSKDV-EEGQTVASGFETPTLFTIAADLTKMEV 211

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------DPIISQQDNNLQTQ 384
            A V    I  V +G   T     Y +     F+  + ++          S   +  +T 
Sbjct: 212 VADVDEADIAGVVEGARVTFTVDAYPED---VFEGKVRQVRLGSTNSSSSSSSTSTSETV 268

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             YEV++        + +++L+    A V    +  
Sbjct: 269 VTYEVVITAD-----NPDLKLKPRLTANVTIYTQIR 299



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 52/137 (37%), Gaps = 4/137 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  S++++G I     V E+ +  SGII K  ++  S + QG  +   + +     + 
Sbjct: 43  GNVSNSITATGTIEPVTEV-EVGTQVSGIIDKIYIDYNSVVKQGEVIAEMDKVTLLSDLQ 101

Query: 98  LKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             + +    +   + +K   +    L+ K  + +  +E            Y  + +++  
Sbjct: 102 SAQATYNGAKAEYEYQKKQYERNEQLHKKQLISDTDYEESLYNYQRSRSSYEQSKAELAK 161

Query: 155 YGISSVYRSLKMKLTRM 171
              +  Y ++   +  +
Sbjct: 162 AERNLSYATITSPIDGI 178


>gi|153837809|ref|ZP_01990476.1| membrane-fusion protein [Vibrio parahaemolyticus AQ3810]
 gi|149748830|gb|EDM59669.1| membrane-fusion protein [Vibrio parahaemolyticus AQ3810]
 gi|328474667|gb|EGF45472.1| membrane-fusion protein [Vibrio parahaemolyticus 10329]
          Length = 377

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G+I+   + V IKS   GI+ +   + G ++ QG PL+      T   +   
Sbjct: 42  IEKQAVAVGKIVPA-HSVSIKSQIDGIVGEVYAKVGEKVKQGQPLIKVRPNPTPQALTDA 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
              +  +R   D E +     N +  V +    S  ++ +       S  + V     + 
Sbjct: 101 SAEL--MRSEADLESAKQKLSNLESLVKQDIIPSNYDEYVSARSAVKSAQADVLQKRQNL 158

Query: 159 SVYRSLKMKLTRMR-----------SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLF 206
            + RS +  +   R           ++   ++++ E   S   +  ++    L  M +L 
Sbjct: 159 ELIRSGEASIGDARLTSTIYAPIDGTVLNQKVEVGEPIISTQSSQAATEMMSLADMNSLI 218

Query: 207 EKNAVSQNDLNQQ 219
            K +VS++D  Q 
Sbjct: 219 FKGSVSEHDAAQL 231



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 75/221 (33%), Gaps = 29/221 (13%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-----------ANYLKEISRDLEQN 269
           + +  ++ EL  +  + ++  + ++ L      +             + +K    D+ Q 
Sbjct: 95  QALTDASAELMRSEADLESAKQKLSNLESLVKQDIIPSNYDEYVSARSAVKSAQADVLQK 154

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVP 323
           ++      S    +   R   TI +PI GT++  +              Q +  +M +  
Sbjct: 155 RQNLELIRSGEASIGDARLTSTIYAPIDGTVLNQKV-EVGEPIISTQSSQAATEMMSLA- 212

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                  +  V+      +  G    +    Y D+       ++ K+  I S+  N+ + 
Sbjct: 213 DMNSLIFKGSVSEHDAAQLSPGMPVMLTVAPYPDV---AISGVLTKV-AIQSENLNSPEG 268

Query: 384 QEYYE-----VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               +       +++ +L     ++ LR+GF +      K 
Sbjct: 269 NASAKSFDNGFEVEVGELKI-PQDVLLRSGFSSTAQIILKK 308


>gi|146311053|ref|YP_001176127.1| macrolide transporter subunit MacA [Enterobacter sp. 638]
 gi|145317929|gb|ABP60076.1| efflux transporter, RND family, MFP subunit [Enterobacter sp. 638]
          Length = 371

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 69/211 (32%), Gaps = 22/211 (10%)

Query: 20  MTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + L  ++ I G   W +L                ++ +V ++G++     V ++ +  SG
Sbjct: 12  LLLAVVVFIGGFWLWQLLNAPVPQYQTLIVRPGELQQNVLATGKLDALRKV-DVGAQVSG 70

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC---HIDTEKSALDFLNN 122
            +K   VE G ++ +G  L   +  +  + I   + ++  LR      + E+        
Sbjct: 71  QLKTLSVEIGDKVTKGQLLGVIDPEQAENQIREVEATLMELRAQRGQAEAERKLAQVTLG 130

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMR--SIYLNR 178
           +   L K      + L     +     +++   +  I     SL      +    I    
Sbjct: 131 RQQALAKTQAVSRQDLDTAATELAVKQAQIGTIDAQIKRNQASLDTAKANLEYTRIVAPM 190

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                + + L+       +    +  L +  
Sbjct: 191 AGEVTQITTLQGQTVIAAQQAPNILTLADMG 221



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 72/254 (28%), Gaps = 51/254 (20%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           +    ++R +    ++L  +     A     Q  L   + L +  AVS+ DL+     + 
Sbjct: 95  EQAENQIREVEATLMELRAQRGQAEAERKLAQVTLGRQQALAKTQAVSRQDLDTAATELA 154

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               ++     + K                                         L   +
Sbjct: 155 VKQAQIGTIDAQIKRNQAS------------------------------------LDTAK 178

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHV 342
              E   I++P+AG +    +          Q   ++ +        ++A+V+   + H+
Sbjct: 179 ANLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMGTMLVKAQVSEADVIHL 237

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G  A   F    D   +      E +   I      +    +Y    ++ +       
Sbjct: 238 KPGQKAW--FTVLGDPLTR-----YEGVLKDILPTPEKVNDAIFYHARFEVPNP---KGV 287

Query: 403 IELRNGFPAEVLFT 416
           + L     A+V   
Sbjct: 288 LRLE--MTAQVHIQ 299


>gi|332885003|gb|EGK05256.1| hypothetical protein HMPREF9456_02926 [Dysgonomonas mossii DSM
           22836]
          Length = 348

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 90/275 (32%), Gaps = 29/275 (10%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           +   K     I    + +  + +  +  Y+  ++ EN   +      + ++         
Sbjct: 24  NKEDKKEERKIPVKIQEISSENSNYKQEYIGSVEGENAVDISFQTAGNIEQVYFQ----- 78

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE-ANLEFANYLKEISRD 265
           E   V +  L  +      +T  L+      K  L    + Y+    L   N L EI   
Sbjct: 79  EGQFVQKGQLLAR-----LNTTSLQSMYDASKATLNQAQDAYNRLTVLHENNSLPEI--K 131

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
             + +       S   I  K+     + +P +G I   +   +        P+  +V  +
Sbjct: 132 YIEVKTALTQAQSAERIARKSLSDCNLYAPFSGVIAK-RYSDAGANIFPGSPVYNMVTIN 190

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               I+  +  K+I  +K G T +V+     +      K + + I               
Sbjct: 191 -TVKIKVAIPEKEISAIKLGQTCSVKISALNNQIVGG-KIVEKGISAHPISHT------- 241

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            Y++ ++I      + N+++  G   +   +  +T
Sbjct: 242 -YDIKVQI-----LNKNLQIMPGMVCKAYLSNGDT 270



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +  E N V+I    +G I++   + G  + +G  L          + D  K ++   +
Sbjct: 54  GSVEGE-NAVDISFQTAGNIEQVYFQEGQFVQKGQLLARLNTTSLQSMYDASKATLNQAQ 112


>gi|319789048|ref|YP_004150681.1| efflux transporter, RND family, MFP subunit [Thermovibrio
           ammonificans HB-1]
 gi|317113550|gb|ADU96040.1| efflux transporter, RND family, MFP subunit [Thermovibrio
           ammonificans HB-1]
          Length = 394

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 80/256 (31%), Gaps = 51/256 (19%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           S +   L     + ++       LE + +  R  L + + +      L+++ AV +  + 
Sbjct: 104 SELTNKLLSVERQAQAKESLLKGLEAQLAAARTALKNAEAEYRRELFLYKRGAVPKEAVE 163

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E    ++  +++E   + K +   +  L  EA                          
Sbjct: 164 KAENAYSRAKAQVKEAESKIKELKLSVKALRREA-------------------------- 197

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
                +  +     + +   G +     +   + A   +P+M++        +   + P+
Sbjct: 198 ---LSIRSSLNYTKVRAVKDGVVEKVYLW-PGSVAVPGRPIMEVFYPESGLKVLVNLPPE 253

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           + + V KG T  V           K    + K+ P    +         Y V + + + +
Sbjct: 254 EARFVVKGGTVEVN---------GKPLGTVAKLYPAAEPKSGL------YTVEVALKENS 298

Query: 398 FSDNN------IELRN 407
               N      + LR 
Sbjct: 299 RLKPNQLVKVKLPLRP 314



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 53/146 (36%), Gaps = 3/146 (2%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+++  +    I +  +G + K     G    +G  L+  +  E T+ +   +   +   
Sbjct: 63  GKVVPREFAQ-ISTKVAGTVLKVTKREGESFKKGELLVLLDSSELTNKLLSVERQAQAKE 121

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +   ++ L     +  +     E R E  L   G       +      S     +K  
Sbjct: 122 SLLKGLEAQLAA--ARTALKNAEAEYRRELFLYKRGAVPKEAVEKAENAYSRAKAQVKEA 179

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLS 193
            ++++ + L+   L  ++  +R+ L+
Sbjct: 180 ESKIKELKLSVKALRREALSIRSSLN 205


>gi|262374012|ref|ZP_06067289.1| multidrug resistance protein mdtN [Acinetobacter junii SH205]
 gi|262311023|gb|EEY92110.1| multidrug resistance protein mdtN [Acinetobacter junii SH205]
          Length = 333

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 52/165 (31%), Gaps = 4/165 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++ S  +G++ +  V++   + +G  L   +       ++  K  +   +  + 
Sbjct: 44  VRGDVIQVASDVNGLVTEVLVQDNQTVKKGQVLFKIDVARQALDVEQAKSDLAKAKAGLA 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ L          E   +  E+    +        SK        V+ +        
Sbjct: 104 QAQATLAGTKASLVKTEANMKLAEKNAARYTSLMDGAISK---QEQDQVFAARDQAFAER 160

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQND 215
             +  +            ALL     +L + + NL     V+  D
Sbjct: 161 EQLKASIEQANAAIEQQYALLDVATSNLHLAELNLHRSEVVAPAD 205



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 83/235 (35%), Gaps = 6/235 (2%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            ++      +   ++V      +V +   +    +    L+    ++  +  +A L+  Q
Sbjct: 47  DVIQVASDVNGLVTEVLVQDNQTVKKGQVLFKIDVARQALDVEQAKSDLAKAKAGLAQAQ 106

Query: 197 KDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             L   K +L +  A     L ++    Y S ++   +  EQ  +    ++ + E   + 
Sbjct: 107 ATLAGTKASLVKTEA--NMKLAEKNAARYTSLMDGAISKQEQDQVFAARDQAFAE-REQL 163

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              +++ +  +EQ         S L + E    +  +++P  GT+         NY +  
Sbjct: 164 KASIEQANAAIEQQYALLDVATSNLHLAELNLHRSEVVAPADGTLSNFDLR-VGNYVKVG 222

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           Q +  ++   +  Y+       ++  +  G  ATV+            + I   I
Sbjct: 223 QAVAALL-DRQQLYVVGYFEETKLDRIHVGDVATVQLMGDKQRIRGHVQGIASGI 276


>gi|253577613|ref|ZP_04854923.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251842983|gb|EES71021.1| conserved hypothetical protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 356

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/327 (10%), Positives = 109/327 (33%), Gaps = 25/327 (7%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           +  I   + ++G++        + +P SG+++  +V++G  + +G  LLT    +  + +
Sbjct: 43  MGKIVEQIYTNGKLEP-GQTTSVYAPASGLVEAVKVKSGDTVKKGQVLLTLSMEQVREQL 101

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + ++++++         K        +  +     E  E  L  +  +  S+   + +  
Sbjct: 102 EKERINLQLTEAERLAAKKQHFESFKQARLENPDLEPEELDLTTYDLRIRSSQLTIQSLE 161

Query: 157 ISSVYRSLKMKLTR-MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                + +       + S+ +N   +  + S +  +    +  ++   N  +     Q  
Sbjct: 162 KQLANQQVLAPADGVVTSLAVNAGQMLAEGSEIATIADVSRLKVSAYLNELDAGKAEQG- 220

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE-----QNQ 270
             +        +     +I          +    + ++E    L ++S +L        +
Sbjct: 221 -MKAVVTGEAFSDSYEGSISYLAPTAGVTDPTSKDTSVEMEVSLNQVSPELRPGYNVTVE 279

Query: 271 RTFAD---EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV---PH 324
               D    ++ +  ++   EQ  +     G  V     +     ++ +  +++V     
Sbjct: 280 MEIPDKERLLAPIDAVQYDGEQVYVFKVQDGVAVKVPVTT----GKEGEDQIELVSGAAA 335

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVR 351
             L  +           ++ G    V+
Sbjct: 336 GDLVVVEGG------DKLQDGAKVKVK 356



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 77/228 (33%), Gaps = 21/228 (9%)

Query: 206 FEKNAVSQNDLNQQER-IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            +K  V      +Q R  + K  + L+    E+    +   E + +A LE  +   E   
Sbjct: 83  VKKGQVLLTLSMEQVREQLEKERINLQLTEAERLAAKKQHFESFKQARLENPDLEPEELD 142

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
               + R  + +++ +  LEK    + +L+P  G +      +      +   +  I   
Sbjct: 143 LTTYDLRIRSSQLT-IQSLEKQLANQQVLAPADGVVTSLAVNA-GQMLAEGSEIATIA-D 199

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                + A +        ++G  A V    ++D     ++  I  + P     D   +  
Sbjct: 200 VSRLKVSAYLNELDAGKAEQGMKAVVTGEAFSDS----YEGSISYLAPTAGVTDPTSKDT 255

Query: 385 EYYEVILKITDLAFSDNNIELRNG--FPAEVLFTAKNTTLAQEIIHPI 430
                     +++ +  + ELR G     E+    K       ++ PI
Sbjct: 256 S------VEMEVSLNQVSPELRPGYNVTVEMEIPDKER-----LLAPI 292


>gi|237665858|ref|ZP_04525846.1| secretion protein HlyD [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|237658805|gb|EEP56357.1| secretion protein HlyD [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 217

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 61/181 (33%), Gaps = 12/181 (6%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E      +  ++   I+    E N+E  + + +      Q+    +D            E
Sbjct: 38  EDARVSADLVSVTPQISGKLMEFNVEEGDKVTKNEILARQDMNGISDV---------NIE 88

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           Q  I SPI G +   +  +       SQ +  +V  +   YI A +   +I  V  G   
Sbjct: 89  QALIRSPIDGIVAK-RQGTVGELWSSSQTMFTLV-DTDKIYIGANIEETKIGKVHIGQPV 146

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRN 407
            +    +A  +       I K         ++  +  + +V+ ++   +   +   ++  
Sbjct: 147 DITIDQFASEKFTGTIKTIGKTSNSALSLISSSSSGTFTKVVQRVPIKIQLDEYKDKIIP 206

Query: 408 G 408
           G
Sbjct: 207 G 207


>gi|254490296|ref|ZP_05103485.1| efflux transporter, RND family, MFP subunit, putative [Methylophaga
           thiooxidans DMS010]
 gi|224464429|gb|EEF80689.1| efflux transporter, RND family, MFP subunit, putative [Methylophaga
           thiooxydans DMS010]
          Length = 492

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 62/182 (34%), Gaps = 20/182 (10%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L +  E    A       L + S D  +  +     ++++    K ++  T  +P  G 
Sbjct: 112 ELVNAQEELVLALNRNNVRLIKASEDRLKALQIADSVINQIKQTRKVQQAITFYAPQTGV 171

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTY--IRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           +          Y +    LM +     L    + A++  +Q + V+ G    +       
Sbjct: 172 VDNLNVR-EGFYVKPGMNLMSV---GDLMTVWVEAEIFERQAELVEAGQAVIMTL---DY 224

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +  +++   ++ + P ++ +           V +++    F + +  L+    A+V    
Sbjct: 225 MPGREWLGKVDYVYPTLNDETRT--------VRVRL---RFDNEDYVLKPNMFAQVTIAT 273

Query: 418 KN 419
             
Sbjct: 274 AE 275



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 3/125 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQVEN-GSQILQGTPLLTFEDIET 92
           +  LPI   + + G +  +++ +    P   G ++K  V+  G  I +G PL      E 
Sbjct: 54  AEYLPIHSEIKTVGYVQYDEDKLVHIHPRVEGWVEKLYVKAAGDPIKRGQPLYKLYSPEL 113

Query: 93  TDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +  +   +++      +    +  L  L     V+ +  ++R+ Q         +    
Sbjct: 114 VNAQEELVLALNRNNVRLIKASEDRLKALQIADSVINQIKQTRKVQQAITFYAPQTGVVD 173

Query: 152 VFNYG 156
             N  
Sbjct: 174 NLNVR 178


>gi|82777118|ref|YP_403467.1| hypothetical protein SDY_1867 [Shigella dysenteriae Sd197]
 gi|81241266|gb|ABB61976.1| putative membrane protein [Shigella dysenteriae Sd197]
          Length = 299

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 68/209 (32%), Gaps = 23/209 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K  + +  ++       +  N+ +   V+  DL            +L     +     
Sbjct: 51  DGKIRVEQVSITPQVSGRIVRLNIKDNQLVNAGDLLLTIDKTPFQIAKLNAQ-AQLAKAQ 109

Query: 242 RHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +  +EAN           A  L   + +++  Q +     + L   +    Q  I 
Sbjct: 110 SDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIR 169

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTAT 349
           +P++G +    +    +YA   +PL  +V  +    I      K+      H+++G  A 
Sbjct: 170 APVSGWVTNLTTR-IGDYADTGKPLFALVDSNSFYVIGYFEETKLR-----HIREGAPAQ 223

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +          K  +  +  I   I  Q 
Sbjct: 224 ITL----YSDNKTLQGHVSSIGRAIYDQS 248



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 46/160 (28%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 15  MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRVEQ--VSITPQVSGRIV 70

Query: 69  KFQVENGSQILQGTPLLTFEDIETT-----DLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +              L K      + + +  +      N  
Sbjct: 71  RLNIKDNQLVNAGDLLLTIDKTPFQIAKLNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 130

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 131 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 170


>gi|71281069|ref|YP_271268.1| RND family efflux transporter MFP subunit [Colwellia
           psychrerythraea 34H]
 gi|71146809|gb|AAZ27282.1| efflux transporter, RND family, MFP subunit [Colwellia
           psychrerythraea 34H]
          Length = 386

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 68/211 (32%), Gaps = 7/211 (3%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           + +  S               +     TR+       ++L  ++   R      +    +
Sbjct: 35  VAEQKSEIKAQIPSHDEKQITAQVKVETRLGQHIHKTIELYGRTEPDRITTLKAEIHGKI 94

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           ++ L ++     + + + E I   +  +L   +   + +L    E+  E  L+      +
Sbjct: 95  IQVLAKRG----SKVAKGEIIAKIALNDLPAQLTRSQALLNQ-REVEYEGALKLNKQGYQ 149

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               L Q+        +++  LE       I +P  G I+  +     +Y      +  I
Sbjct: 150 GKVHLAQSYAALESVNAEIKRLELDIAHTIIKAPFTG-ILNTRYVEVGDYVASGDDIAMI 208

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
                   +RA  T +QI  +  G  A V  
Sbjct: 209 A-DLDPLIVRAHATEQQISQLSVGQVAQVTL 238


>gi|299133144|ref|ZP_07026339.1| secretion protein HlyD family protein [Afipia sp. 1NLS2]
 gi|298593281|gb|EFI53481.1| secretion protein HlyD family protein [Afipia sp. 1NLS2]
          Length = 296

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 74/209 (35%), Gaps = 25/209 (11%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            ++ L   E++ +Q+       +    A++      +  S  L   Q  +    + L I 
Sbjct: 89  AEAALAGAESLRDQRQQEYERRQRLSSASISDEALAQAHSAALS-AQAAYDQAQAALNIA 147

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +    +  + +P+ G +         +YA   + ++ +V  S   Y+       +++ + 
Sbjct: 148 KLNLARTQVRAPVNGHVTNLLLD-KGDYATAGKAMVAVV-DSDSYYVAGYFEETKLRSIH 205

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ---------------EYYE 388
            G   ++R   ++     + +  +  +   I+ +DN   ++               +   
Sbjct: 206 IGDDVSIRLLGFS----PELRGHVASVARAITDRDNLPGSELIANVNPTFNWVRLAQRIP 261

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTA 417
           V + I    +   +I L  G  A V+ T 
Sbjct: 262 VRIAID---YVPPDITLSAGMTATVVVTG 287



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 3/90 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRC 108
              NVV++    SG++   +V +   +  G  L   +           +      ++LR 
Sbjct: 42  VRANVVQVTPDVSGVVIDVRVTDNQSVKVGDVLFVIDQARFQLALSNAEAALAGAESLRD 101

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQL 138
               E      L++     E   ++    L
Sbjct: 102 QRQQEYERRQRLSSASISDEALAQAHSAAL 131


>gi|237713230|ref|ZP_04543711.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262406630|ref|ZP_06083179.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294643430|ref|ZP_06721248.1| efflux transporter, RND family, MFP subunit [Bacteroides ovatus SD
           CC 2a]
 gi|294807771|ref|ZP_06766562.1| efflux transporter, RND family, MFP subunit [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229446697|gb|EEO52488.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262355333|gb|EEZ04424.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292641244|gb|EFF59444.1| efflux transporter, RND family, MFP subunit [Bacteroides ovatus SD
           CC 2a]
 gi|294445009|gb|EFG13685.1| efflux transporter, RND family, MFP subunit [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 416

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 109/314 (34%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTCSK 151
            + I + +V + N   ++D E      L  K +  E     R   +    L +  +    
Sbjct: 45  AEDIQIAEVKVSNFMEYVDVEGLIQPILTIKINTREAGSVERIVGEEGSLLQQGDTILVL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + S+         +M +     +++E KS  L+    ++  +L  +K        
Sbjct: 105 SNPDLLRSIEDQRDEWEKQMITYQEQEIEMEQKSLNLKQQALTNNYELERLK-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        + +  + E +   +  N    + +L   + +  I ++L +N R
Sbjct: 157 -KSIALDREEFQMGVKSKAQLQVAEDEYGYKLKNAALQQESLRHDSAVTMIRKELIRNDR 215

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  K     +      I +P+ G + + +  +        + + +I        I 
Sbjct: 216 ER--ERKKYERTCERLNSLVITAPLKGQLSFVKV-TPGQQVSSGESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRF--PHYADIREKKFKAIIEK---IDPIISQQ-DNNLQTQE 385
             ++   I  +  G  ATV +    Y     K    + ++   +D + +    +N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATVNYQGNKYPLKITKVVPEVKDRMFDVDLVFTGDMPDNVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEQA 345


>gi|297680167|ref|XP_002817874.1| PREDICTED: huntingtin-interacting protein 1-like, partial [Pongo
           abelii]
          Length = 1075

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 67/196 (34%), Gaps = 10/196 (5%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV---- 152
           D K   I+ L   I   K+ L+ +  +   +    + R  +L   L +      +     
Sbjct: 409 DEKDHLIEQLYREISGLKAQLENMKTESQRVVLQLKGRVSELEAELAEQQHLRQQAADDC 468

Query: 153 --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 +  + R  +      RS+       +        L   + + +    +L  KNA
Sbjct: 469 EFLRAELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNA 528

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
               ++ +Q  +  ++ ++L     E ++ L  I++       E    L+ + ++L  +Q
Sbjct: 529 ----EVTKQVSVARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQ 584

Query: 271 RTFADEMSKLTILEKT 286
           R        L    ++
Sbjct: 585 RELQVLQGSLETSAQS 600


>gi|283779962|ref|YP_003370717.1| phytochrome sensor protein [Pirellula staleyi DSM 6068]
 gi|283438415|gb|ADB16857.1| putative phytochrome sensor protein [Pirellula staleyi DSM 6068]
          Length = 713

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 58/167 (34%), Gaps = 7/167 (4%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W    R  P ++  + + + + I G +      P +  V++ G++   +      +   G
Sbjct: 406 WIVRTRAIPKTIAVLAIFAAVVIAGFVI-----PADFEVAARGKLQPVERREVF-AMIDG 459

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I+++  V +G  + +G PL T    +    +          +  I + +  L        
Sbjct: 460 IVREVPVRHGQLVERGQPLATLTSTDLEVELAALIGRQTTNQEQIASHQRMLLDSGAMQA 519

Query: 126 VLEKAFESREE-QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            L  A E+R   +LL    +  +   ++  +       ++       
Sbjct: 520 RLTPADENRISGELLQLKQEQDNIEREIALFREKQELLAIVAPQRGQ 566


>gi|218131781|ref|ZP_03460585.1| hypothetical protein BACEGG_03402 [Bacteroides eggerthii DSM 20697]
 gi|317474604|ref|ZP_07933878.1| efflux transporter [Bacteroides eggerthii 1_2_48FAA]
 gi|217986084|gb|EEC52423.1| hypothetical protein BACEGG_03402 [Bacteroides eggerthii DSM 20697]
 gi|316909285|gb|EFV30965.1| efflux transporter [Bacteroides eggerthii 1_2_48FAA]
          Length = 391

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 3/102 (2%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK-- 114
           VEI+   SG I K  V+ GS + +G  L + + ++    ++  K +++  +  ++T++  
Sbjct: 57  VEIRPMVSGFITKLHVDEGSVVRKGQVLFSIDPVQYQAAVNSAKAAVETAKAAVNTQELT 116

Query: 115 -SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            S    LN K  + +   +  E QL     +     +++ N 
Sbjct: 117 VSNKRTLNQKNIISDYDLQMAENQLAQTKAQLAQAEAQLVNA 158



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/99 (10%), Positives = 25/99 (25%), Gaps = 3/99 (3%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFAD 275
           Q +  V  +   +             ++           +   L+     L Q +   A 
Sbjct: 91  QYQAAVNSAKAAVETAKAAVNTQELTVSNKRTLNQKNIISDYDLQMAENQLAQTKAQLAQ 150

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             ++L   +      ++ SP  G +         +    
Sbjct: 151 AEAQLVNAKNNLSYTSVTSPSDGIVGTIPYR-VGSLVSP 188


>gi|171913362|ref|ZP_02928832.1| secretion protein HlyD [Verrucomicrobium spinosum DSM 4136]
          Length = 379

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 69/248 (27%), Gaps = 32/248 (12%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +  K   ++       ++  ++  L + N  +   L + +    +  +E           
Sbjct: 60  ITGKVVDIKVEEGMKVEEGQVLAKLDDTNVQASLRLAEAQLESARRAIEETRPTSVFAEQ 119

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR-------EQKTIL 293
                           + L +   +    Q   A + S L + E+         +   I 
Sbjct: 120 EVKRFTDLAATKAASMSDLNKAQAEARSLQAKLARQQSDLIVAERELATWTQQVDDTIIR 179

Query: 294 SPIAGTIVYNQSF--------SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           +P  G +    +         SS  + +    +  +V       I   V+   I  V  G
Sbjct: 180 APFPGVVTSKNAQPGEMISPMSSGGFTRTG--ICTLV-DMSSLEIEVDVSESYINRVAPG 236

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
                    Y+D +     A +  I P   +Q           V +++    F   +  +
Sbjct: 237 QPVEATLDAYSDWK---IPARVVAIIPTADRQKAT--------VKVRV---GFDKLDPRI 282

Query: 406 RNGFPAEV 413
                 +V
Sbjct: 283 LPEMGVKV 290



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 44/135 (32%), Gaps = 3/135 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           +SG +        + S  +G +   +VE G ++ +G  L   +D      + L +  +++
Sbjct: 44  ASGYVTARREA-TVSSKITGKVVDIKVEEGMKVEEGQVLAKLDDTNVQASLRLAEAQLES 102

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            R  I+  +    F   +         ++   + D         S      ++     L 
Sbjct: 103 ARRAIEETRPTSVFAEQEVKRFTDLAATKAASMSDLNKAQAEARS--LQAKLARQQSDLI 160

Query: 166 MKLTRMRSIYLNRLD 180
           +    + +      D
Sbjct: 161 VAERELATWTQQVDD 175


>gi|47224891|emb|CAG06461.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 929

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 74/209 (35%), Gaps = 12/209 (5%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSA-----LDFLNNKYDVLEKAFESREEQLLDFLGK 144
             T+ L +  +  +K LR  ++ E++            + + L+K  E    Q   +L  
Sbjct: 460 THTSQLREESEGLLKQLRTSLEAERAEERDRLEAEKRQEMERLKKESELESSQRKSWLSS 519

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 ++       + +       +M  + L     E+K   +   +    K+L   + 
Sbjct: 520 LQDEKERLQAAHSEQLGKLRLQFDKQMEQMKLEHSRRESKLQQVAEQIKLRAKELETQEA 579

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             +  A  +    + ER + K  L+ L +   E + + +   E  D A  E     KE  
Sbjct: 580 RLQTKAFHR---LRLERDLLKEELQRLMKENQEARELAKRAQEGRDVARKEEQKLWKERD 636

Query: 264 RDLEQNQRTFAD---EMSKLTILEKTREQ 289
           + +E++ R   D      K   LEK   +
Sbjct: 637 KAIEESLRARLDKELLEKKTEHLEKKLHR 665


>gi|325168757|ref|YP_004280547.1| auxiliary transporter, MFP family [Agrobacterium sp. H13-3]
 gi|325064480|gb|ADY68169.1| auxiliary transport protein, MFP family, putative [Agrobacterium
           sp. H13-3]
          Length = 306

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 71/181 (39%), Gaps = 5/181 (2%)

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           +  ++L  K A  +    +++  + +  L+      ++       N + D+A  E     
Sbjct: 95  SDQESLSAKIASEEALQAEEQHNLLQMKLKNSARQADRVKRAAAGNAVSDQALDEALTAR 154

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS-FSSSNYAQQSQPL 318
             ++ +L+      A    +  I  +  E +TI +P+ G I+           A  +  +
Sbjct: 155 DNLTGELKVAASVLAAAKMRRDIAAREVEIRTIRAPVDGFIIRQGIKVGEFAAASGATEM 214

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             I+P  +   +RA++  + + +VK G    V      D   + ++  I +I P++ Q  
Sbjct: 215 FTILPEGQK-IVRAEIPEQFLDNVKPGVPVEVLA---EDRNGQAYQGRISRISPVLMQST 270

Query: 379 N 379
            
Sbjct: 271 G 271



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 14/136 (10%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF--------------ED 89
            ++ G +     ++ + SP  GI+    V  G Q+  G  +                 E 
Sbjct: 50  AAARGVVDIPGGLLRVTSPRDGIVASLLVHEGDQVKTGDVMAMLYSDQESLSAKIASEEA 109

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           ++  +  +L ++ +KN     D  K A          L++A  +R+    +         
Sbjct: 110 LQAEEQHNLLQMKLKNSARQADRVKRAAAGNAVSDQALDEALTARDNLTGELKVAASVLA 169

Query: 150 SKVFNYGISSVYRSLK 165
           +      I++    ++
Sbjct: 170 AAKMRRDIAAREVEIR 185


>gi|296160299|ref|ZP_06843117.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
 gi|295889510|gb|EFG69310.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
          Length = 414

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/315 (12%), Positives = 94/315 (29%), Gaps = 46/315 (14%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V  G  +  G  L       +   +   ++  + L+                   ++ A 
Sbjct: 72  VNVGDTVKTGQALGQVSGDLSNPRVSELRILDQQLK-------------------VQSAD 112

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            ++ EQ LD           ++         S   +  + R           + + L AL
Sbjct: 113 LAQREQSLDMRIADRERQQALYRD------ESRDQQSLQSRYAGAQIQQAHAELARLDAL 166

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH-------EQKNMLRHI 244
            +    D+     LF+K  +S+    +       +  +                     +
Sbjct: 167 SALADADMHRASTLFDKGYLSRAGYERSVGTARANLAQAEAQRALVNQSQVSYAAARAGL 226

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI---------LSP 295
                 A  E     +++  +L   ++  A+  +  T   +  E+            ++ 
Sbjct: 227 QLDGPRALSEPEQRNRQLELELVDLKQQRAEAKTLDTATRQELERVEAELEHQRMASVAA 286

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
              ++V++    S        P+M++V  +   ++ A      +  +K G  A VR    
Sbjct: 287 DRQSVVWSLDAQSGEALTAGSPIMQLVDSND-VWVDAFFDESDVSDLKVGAHAEVRL--- 342

Query: 356 ADIREKKFKAIIEKI 370
                +++  +IE I
Sbjct: 343 -AQDSRRWTGVIETI 356


>gi|284104062|ref|ZP_06386128.1| HlyD family secretion protein [Candidatus Poribacteria sp. WGA-A3]
 gi|283830221|gb|EFC34470.1| HlyD family secretion protein [Candidatus Poribacteria sp. WGA-A3]
          Length = 455

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 26/256 (10%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +E +      LL+  + D    +    +  +SQ   N  +R    ++L L+E   E++  
Sbjct: 85  VEGQQVRRGELLARIKPDYYEAQVEQAEAQLSQAKANLSQRE---ASLLLQEQTLERQRQ 141

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           L     +  E   +     K    DL+          ++L  +++   +  + +P++GT+
Sbjct: 142 LYEAEVIPLEQYEQSKTQHKIAQTDLDAATFNVESAEARLREVKEQLSKTVLYAPMSGTV 201

Query: 301 VYNQS----FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
                      + N  Q    +MK V   +   +  +V+   + +V  G TA++    Y 
Sbjct: 202 SQLDIELGERVTGNELQAGTTVMK-VARLEQMELEVEVSENDVVNVMLGDTASIEVDAYP 260

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSDNNIE----------- 404
           +     FK ++ +I      Q +  Q Q   + V ++I D                    
Sbjct: 261 ERY---FKGVVTEIANSARLQGSTFQEQVTNFPVKIRILDPHNPAAQSPGILSETPSIQD 317

Query: 405 ---LRNGFPAEVLFTA 417
               R G    V    
Sbjct: 318 YPSFRPGMSGTVDIFT 333



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 72/201 (35%), Gaps = 4/201 (1%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDI 90
           I  + L  +  +V++SG +  E  V  + SP  SG I +  V  G Q+ +G  L   +  
Sbjct: 45  IVTAQLRTVTQTVTASGRVQPE--VEIVISPDVSGEIVQLPVVEGQQVRRGELLARIKPD 102

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF-LGKYHSTC 149
                ++  +  +   + ++   +++L       +   + +E+    L  +   K     
Sbjct: 103 YYEAQVEQAEAQLSQAKANLSQREASLLLQEQTLERQRQLYEAEVIPLEQYEQSKTQHKI 162

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           ++      +    S + +L  ++      +     S  +  L     + +T  +      
Sbjct: 163 AQTDLDAATFNVESAEARLREVKEQLSKTVLYAPMSGTVSQLDIELGERVTGNELQAGTT 222

Query: 210 AVSQNDLNQQERIVYKSTLEL 230
            +    L Q E  V  S  ++
Sbjct: 223 VMKVARLEQMELEVEVSENDV 243


>gi|86606057|ref|YP_474820.1| hypothetical protein CYA_1387 [Synechococcus sp. JA-3-3Ab]
 gi|86554599|gb|ABC99557.1| conserved domain protein [Synechococcus sp. JA-3-3Ab]
          Length = 618

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/219 (11%), Positives = 69/219 (31%), Gaps = 19/219 (8%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    ++  +  +  L   ++ E+  L    ++    ++     E QL   + +  S   
Sbjct: 200 QYQARLEHYQEQVAALEAQLERERQQLVESQSRQQQQQQRIAELEAQLAAQIQQG-SEQH 258

Query: 151 KVFNYGISSVYRSLKMKLTR--------MRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           +     I  +   L+ +  R           +   + +LE        L     +    +
Sbjct: 259 RAAQQRIQELEEQLRAQQDRGSAQVQALAEQLQAAQAELETLRRHCHELTEWQSQAKLKL 318

Query: 203 KNL-------FEKNAVSQNDLNQQERIVYKSTLELRENIHE---QKNMLRHINELYDEAN 252
           + L        +  A  +  L  +E  +   +  L+E  H+    ++    +      A 
Sbjct: 319 QELGSRLQQHQQAEAQLRQALEHKEAELAALSQSLQEQQHQLQVAQSTKARLIADLAHAR 378

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            E +  +  +  +L++ Q        +L  ++   +   
Sbjct: 379 QEASQTIHRLRGELQEAQTQLQVTQERLQEVQAQLQATQ 417



 Score = 43.1 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 24/237 (10%), Positives = 73/237 (30%), Gaps = 16/237 (6%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
           + + + P    + +  V+ G  +         +          K+  ++  R   ++ + 
Sbjct: 122 IQQRQHPER-KLGEILVQQG-WVQPHWLEWALD----------KQQQLRRRRGAANSWEV 169

Query: 116 ALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
            L+  +   D     A   +  Q +      +    + +   ++++   L+ +  ++   
Sbjct: 170 MLEQWSTIPDQPPLYASPLQVAQQVHKATAQYQARLEHYQEQVAALEAQLERERQQLVES 229

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              +   + + + L A L++  +  +      ++      +L +Q R          + +
Sbjct: 230 QSRQQQQQQRIAELEAQLAAQIQQGSEQHRAAQQRI---QELEEQLRAQQDRGSAQVQAL 286

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EQ    +   E       E   +  +    L++              L +  E K 
Sbjct: 287 AEQLQAAQAELETLRRHCHELTEWQSQAKLKLQELGSRLQQHQQAEAQLRQALEHKE 343


>gi|27377971|ref|NP_769500.1| hypothetical protein blr2860 [Bradyrhizobium japonicum USDA 110]
 gi|27351117|dbj|BAC48125.1| blr2860 [Bradyrhizobium japonicum USDA 110]
          Length = 408

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 20/179 (11%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + +L  +   + A+        ++  Q  +   M+ +   E    QK + +P +G
Sbjct: 148 KAQATVAQLSLDRAKQLASRQFGPQATVDTAQAAYDQAMAGIAKTEALISQKLVRAPFSG 207

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
             +  +      Y      ++ +       +    VT K   ++K G    ++   Y   
Sbjct: 208 D-LGMRKVEVGQYLTAGTAIVSLT-DLSELWANFTVTEKDSGNLKVGQPVRLKVDAYPGR 265

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
               F A I  I+P I+    N++ Q              ++ +  L+ G       T 
Sbjct: 266 T---FDAKITTIEPQIATDTRNIRVQ-----------ATVANPDKILKPGM----FVTT 306



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 59/183 (32%), Gaps = 32/183 (17%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIG-----IIGLITW----------SILLP------I 40
           H    + + +     ++ +    IIG     ++G + W                     +
Sbjct: 19  HKISGEPIDKAPKRPVRPVLWFVIIGTLLGALVGGLVWFNYFRGQMIKQFFANNKPPPTM 78

Query: 41  EISVSSSGEILNED----------NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
             +  +  E++             + V++ +  +G + + + E GS +  G PL+   D 
Sbjct: 79  VSAAEAKSEVVPNLLTAVGGLAAVHQVDVSADVNGRVTEIKFEPGSHVEAGMPLVQLFDA 138

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                +   K      +  +D  K            ++ A ++  +Q +  + K  +  S
Sbjct: 139 PDQGDLANYKAQATVAQLSLDRAKQLASRQFGPQATVDTA-QAAYDQAMAGIAKTEALIS 197

Query: 151 KVF 153
           +  
Sbjct: 198 QKL 200


>gi|331673210|ref|ZP_08373978.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli TA280]
 gi|331069408|gb|EGI40795.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli TA280]
          Length = 288

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 62  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 120

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q + A   + L   +    Q  I +P++G +    +    +YA   
Sbjct: 121 AEELDTANLNVKAMQASVAAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 179

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 180 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 230

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 231 RAIYDQS 237



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 4   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 59

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 60  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 119

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 120 SAEELDTANLNVKAMQASVAAAQATLKQAQWQLAQTEIRA 159


>gi|213693283|ref|YP_002323869.1| protein of unknown function DUF214 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213524744|gb|ACJ53491.1| protein of unknown function DUF214 [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 1206

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 77/226 (34%), Gaps = 26/226 (11%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E    ++  K  + + R  +D  ++ L     K +      +    Q+   L       +
Sbjct: 379 EARTQLESGKTQLTSARKQLDAAQTELTANRTKIEQGITQIDQGVAQIDQMLSMIQQADN 438

Query: 151 KVFN------------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS-HQK 197
            +                I  +   L + L  + SI   R  L  K + L+    S  Q+
Sbjct: 439 LLAQLDPNIDFNSPTWQAIKQLLARLGITLPEVPSISELRQQLAAKQTELQTQRDSLAQQ 498

Query: 198 DLTMMKNLFEKNAVSQNDLNQQ-------ERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + + L E  A +Q+ L+QQ       E+ V     +L     E +     +     +
Sbjct: 499 KADLQRTLNETIAPAQSTLDQQNAQLTAKEQEVAAGEAQLNTKSAELEANAATLETQSAQ 558

Query: 251 ANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              + A        L+E  R L++ ++  AD  +KL   +   + K
Sbjct: 559 LEAQAAQLASGKQQLEEGERQLKEGEQQLADGKAKLDDAQSALDAK 604


>gi|206578786|ref|YP_002239567.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|288936411|ref|YP_003440470.1| secretion protein HlyD [Klebsiella variicola At-22]
 gi|290510534|ref|ZP_06549904.1| HlyD family secretion protein [Klebsiella sp. 1_1_55]
 gi|206567844|gb|ACI09620.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|288891120|gb|ADC59438.1| secretion protein HlyD family protein [Klebsiella variicola At-22]
 gi|289777250|gb|EFD85248.1| HlyD family secretion protein [Klebsiella sp. 1_1_55]
          Length = 331

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADE 276
           Q++  +  S+     ++   ++           A  +   Y      +++ Q + +    
Sbjct: 131 QRQLGLRASSAISANDLENARSSRDQAQATLKSAQDKLRQYRAGNRPQEIAQAKASLEQA 190

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + L   +       + +P  GT++  ++            ++ +   +   ++RA V  
Sbjct: 191 QAALAQAKLDLHDTVLTAPSDGTLMT-RAVEPGTMLNAGGTVLTLS-LTHPVWVRAYVDE 248

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVIL 391
           K +   + G    +   +     +K +   I  + P       + +  +L+T   Y + +
Sbjct: 249 KNLGQAQPGREVLL---YTDSRPDKPYHGKIGFVSPSAEFTPKTVETPDLRTDLVYRLRI 305

Query: 392 KITDLAFSDNNIELRNGFPAEV 413
            + D      +  LR G P  V
Sbjct: 306 VVNDA-----DGALRQGMPVTV 322



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 10/134 (7%), Positives = 30/134 (22%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G  I  G  L   +     + +   + ++   +   D   +        
Sbjct: 51  GGRLASLTVDEGDSIRAGQTLGELDRAPYENALLQAQANVSTAQAQYDLMMAGYRAEEIA 110

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                               +             + +  +   +     ++   +  L  
Sbjct: 111 QAAAAVKQAQAAYDYAQNFYQRQLGLRASSAISANDLENARSSRDQAQATLKSAQDKLRQ 170

Query: 184 KSSLLRALLSSHQK 197
             +  R    +  K
Sbjct: 171 YRAGNRPQEIAQAK 184


>gi|187924394|ref|YP_001896036.1| secretion protein HlyD [Burkholderia phytofirmans PsJN]
 gi|187715588|gb|ACD16812.1| secretion protein HlyD family protein [Burkholderia phytofirmans
           PsJN]
          Length = 437

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 87/276 (31%), Gaps = 34/276 (12%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            + +   +L   + ++ S+Y+N        +  ++ L   Q DL   + + +  AVS   
Sbjct: 117 ALGNAEANLGQTVRQVSSLYVNNHFYAANVAQKQSDLVRAQADLRRRQGVADMGAVS--- 173

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                           E+I   ++ +       D A+ +             +       
Sbjct: 174 ---------------AEDIAHSRDAVTAAQAALDAAHQQAEANRALTDLTTIEQHPNVQA 218

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             SK+        + T+ +P+ G +   ++           PLM IVP     ++ A   
Sbjct: 219 AASKVRDAYLGYARNTLPAPVTGYVAK-RAVQVGQRVSPGTPLMAIVPLDG-VWVDANYK 276

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----------E 385
             Q+++++ G   T+    Y      K+   +            +L  Q          +
Sbjct: 277 ENQLRNMRIGQPVTLTADVYGGKV--KYHGRVVGFSAGTGSAFASLPAQNATGNWIKIVQ 334

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                +++       + + +  G   +V    ++ T
Sbjct: 335 RLPARIQLDQKELEAHPLRI--GLSMDVDVDTRDNT 368


>gi|163741239|ref|ZP_02148631.1| hypothetical protein RG210_17305 [Phaeobacter gallaeciensis 2.10]
 gi|161385592|gb|EDQ09969.1| hypothetical protein RG210_17305 [Phaeobacter gallaeciensis 2.10]
          Length = 378

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 79/219 (36%), Gaps = 21/219 (9%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           K+A+    L Q      +  ++  E  +++   L   + + +    + A  L      L 
Sbjct: 175 KSALIDQSLAQLRLETKRIEVDQSERDYDRLTSLLAKDAVSERVTQDAATALSLAKTALR 234

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY------AQQSQPLMKI 321
           Q ++       K+ I ++  ++ TI +P++GTI    +   ++        + +  LM I
Sbjct: 235 QAEQDIHLANLKVEIAQEHVDELTIRAPVSGTITQLNARIGNSVLARVDTIRDTDYLMVI 294

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
              +   Y+ A+V    +  ++ G T       + D     F+  +  I P++S +   +
Sbjct: 295 T-DTASMYLDAEVAETNVSRLRVGLTGEAVLDGFPDQ---PFEVRVVGISPVVSAERGTI 350

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                         L        +R    A +  T  +T
Sbjct: 351 SL-----------RLELDGPPDGIRPNMAARIRITLSDT 378



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 51/142 (35%), Gaps = 3/142 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++ SG +L +D          G I    V  G  + +G PL    D      +    +  
Sbjct: 123 ITGSGYVLVQDYASVFAKYE-GTITDLLVALGDPVTRGQPLAAVSDPGAQYALKSALIDQ 181

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  ++T++  +D     YD L       ++ + + + +  +T   +    +    + 
Sbjct: 182 SLAQLRLETKRIEVDQSERDYDRLTSLLA--KDAVSERVTQDAATALSLAKTALRQAEQD 239

Query: 164 LKMKLTRMRSIYLNRLDLENKS 185
           + +   ++     +  +L  ++
Sbjct: 240 IHLANLKVEIAQEHVDELTIRA 261


>gi|34497915|ref|NP_902130.1| hypothetical protein CV_2460 [Chromobacterium violaceum ATCC 12472]
 gi|34103770|gb|AAQ60131.1| probable membrane protein [Chromobacterium violaceum ATCC 12472]
          Length = 326

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 68/202 (33%), Gaps = 16/202 (7%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADE 276
           +++R +  +    R+++   ++         D A  +           ++ ++       
Sbjct: 131 KRQRDLVPAGGSSRQSLEAARSQRDQSVAQRDAAIQQLKALAAGFRPEEIAESDAQLKQA 190

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + +       +  ++ SP AG I+  ++  + +  Q   P   +    +  ++RA V  
Sbjct: 191 RANVAAARLALKDASLQSPSAGIILA-RAVEAGSMVQAGTPAFTLS-LRQPVWVRAYVGE 248

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVIL 391
            Q+     G    V    + +   +    ++  + P       S +  +L+T   Y + +
Sbjct: 249 SQLGKFATGTEVQVSSDSHPEKIYR---GVVGFVSPTAEFTPKSVETADLRTALVYRIRV 305

Query: 392 KITDLAFSDNNIELRNGFPAEV 413
            + D            G P  V
Sbjct: 306 VVGDADAGLGQ-----GMPVTV 322



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/148 (10%), Positives = 46/148 (31%), Gaps = 8/148 (5%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFE--DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           SG +   QV+ G  +  G  L   +   ++      L   +    R  +  + +  + + 
Sbjct: 51  SGRLSSVQVDEGDSVQPGQILARLDVEPLKNNLNAALANEAASAARNALMRKGNRSEDIA 110

Query: 122 NKYDVLEKAFESREEQLLDFLGKYH-----STCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                L  A  +  +   ++  +        +  +      S   +S+  +   ++ +  
Sbjct: 111 QARSRLYAAQAAVVQADSEYKRQRDLVPAGGSSRQSLEAARSQRDQSVAQRDAAIQQLKA 170

Query: 177 NRLDLE-NKSSLLRALLSSHQKDLTMMK 203
                   + +   A L   + ++   +
Sbjct: 171 LAAGFRPEEIAESDAQLKQARANVAAAR 198


>gi|193066090|ref|ZP_03047146.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E22]
 gi|194427423|ref|ZP_03059972.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B171]
 gi|260846638|ref|YP_003224416.1| hypothetical protein ECO103_4585 [Escherichia coli O103:H2 str.
           12009]
 gi|192926252|gb|EDV80890.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E22]
 gi|194414463|gb|EDX30736.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B171]
 gi|257761785|dbj|BAI33282.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|323160727|gb|EFZ46664.1| hlyD family secretion family protein [Escherichia coli E128010]
          Length = 378

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAV 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 347


>gi|330960266|gb|EGH60526.1| HlyD family secretion protein [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 294

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 72/224 (32%), Gaps = 21/224 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q+      R    +  E +E   + +   R    L    NL     L+E      +  
Sbjct: 78  IDQDRFRLSLRQAQATVAERQETWEQARRENRRNRSLG---NLVAREQLEESQSREARAL 134

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +    +   +   ++  I SP+ G  + +++     +    +P++ +V  S   +I
Sbjct: 135 SALGEARVAVDAAQLNLDRSVIRSPVDGY-LNDRAPREHEFVTAGRPVLSVV-DSASFHI 192

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQDN 379
                  ++  +  G    +R             +I+  I+           P ++   +
Sbjct: 193 DGYFEETKLDGIHVGQGVDIRVIGDNARLTGHVVSIVAGIEDRDRTSGSNLLPNVNPAFS 252

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT--AKNTT 421
            ++  +   V +   D+     +  +  G  A V      + TT
Sbjct: 253 WVRLAQRIPVRIAFDDV---PKDFRMIAGRTATVSIVEDTQETT 293



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 47/119 (39%), Gaps = 6/119 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           +VV+I    SG+I+K +V +   + +G  L + +       +   + ++   +   +  +
Sbjct: 46  DVVQIAPDVSGLIQKVEVTDNQPVHKGQVLFSIDQDRFRLSLRQAQATVAERQETWEQAR 105

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                  +  +++ +      EQL +   +     S +    ++     L +  + +RS
Sbjct: 106 RENRRNRSLGNLVAR------EQLEESQSREARALSALGEARVAVDAAQLNLDRSVIRS 158


>gi|319407781|emb|CBI81432.1| putative secretion protein [Bartonella sp. 1-1C]
          Length = 376

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V +SG +     +V + +  +G +   +V +G  + +G  +   +  +  + +  K
Sbjct: 24  IEETVLASGIVRPY-RLVAVGARATGRVVSVRVSSGDFVEEGDLIAEIDPTDQENDLKRK 82

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +      +   ++ L       +   K  E+R     +F      T  K+    ++ 
Sbjct: 83  KAVLSYYYASLKEHEAYLILAKKNLERQNKLIEARAISRANFDDAV--TQVKIREAQVAQ 140

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +      +RS  +N
Sbjct: 141 LQEQIVQAQIDVRSAEVN 158



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/318 (14%), Positives = 101/318 (31%), Gaps = 50/318 (15%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           +  +  + D+ E    S   +    +        +V +  +SS     +  L        
Sbjct: 15  MTAVVTRGDIEETVLASGIVRPYRLVAVGARATGRVVSVRVSSGDFVEEGDLIAEIDPTD 74

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              DL+ K ++L    +S ++    +  L +KN   QN L +   I   +  +    +  
Sbjct: 75  QENDLKRKKAVLSYYYASLKEHEAYLI-LAKKNLERQNKLIEARAISRANFDDAVTQVKI 133

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           ++  +  + E   +A ++                             E       I +P 
Sbjct: 134 REAQVAQLQEQIVQAQIDV-------------------------RSAEVNLSYTKITAPS 168

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           +GT++             +Q    IV         I+A+++   I  V  G    + F  
Sbjct: 169 SGTVLA-TVVEEGQNINATQSAPTIVILGDLTKMTIKAQISEADILKVHAGQ--DLYFTI 225

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQE-------------YYEVILKITDLAFSDN 401
             D + ++++  +E I+P      +++                 YY  ++ +     ++ 
Sbjct: 226 LGDAK-RRYEGSLETIEPAPEDIRSDISINPNMSGSSSLASSAIYYNGLVHV-----NNK 279

Query: 402 NIELRNGFPAEVLFTAKN 419
           +  LR    A+V      
Sbjct: 280 DRFLRTYMTAQVHIILGR 297


>gi|292491817|ref|YP_003527256.1| efflux transporter RND family, MFP subunit [Nitrosococcus
           halophilus Nc4]
 gi|291580412|gb|ADE14869.1| efflux transporter, RND family, MFP subunit [Nitrosococcus
           halophilus Nc4]
          Length = 515

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/356 (11%), Positives = 101/356 (28%), Gaps = 25/356 (7%)

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +        F  + T      ++++I+ L     T    L  +    D    A     E
Sbjct: 95  VVDAPQIPGIFRPVVTPQHSGRRQLAIR-LVAPGMTVTHLLGAVTVYPDREAAAQAHPPE 153

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL-LSSH 195
              +    +        ++ + +V +    +      +   R D E +     A  L +H
Sbjct: 154 AEEEGGITFLLEQQWRVDFALQAVRQHTLQESVAATGVVGARADGEAQIHAPTAGHLLTH 213

Query: 196 QKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             D   +    E+  +          E       L +++   + +  +     L      
Sbjct: 214 GADFPQVGRSVEQGQILAVIAPHLAAEADFASLELAVQKARSQYQFAVHERQRLEGLWAQ 273

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK------TILSPIAGTIVYNQSFS 307
             A   + ++   E+       E ++  + +   +         + +PI+GT+   Q  +
Sbjct: 274 NAAPKHRLVAARKEEAIAKAELEAARRRLEQYQLQSSGAVSGVPVRAPISGTVAQVQV-A 332

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD--IREKKFKA 365
           + +Y +  Q L  +V  +   ++ A++    +  +     A      +        +   
Sbjct: 333 AGSYLEVGQALFHVV-QTDRLWLEARIAEADLGRLHHPTAAWFEVDGFDQPFRINPEQGG 391

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                  ++ +                     F + N  LR G  A V        
Sbjct: 392 QRVAFSTVVDKVSRTTPLIF-----------EFPNPNQALRIGMFARVRVLTGKKV 436


>gi|251790068|ref|YP_003004789.1| secretion protein HlyD family protein [Dickeya zeae Ech1591]
 gi|247538689|gb|ACT07310.1| secretion protein HlyD family protein [Dickeya zeae Ech1591]
          Length = 421

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/323 (9%), Positives = 81/323 (25%), Gaps = 85/323 (26%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            + +PF   I +  V++G ++ +G PLL  +                             
Sbjct: 65  VVSAPFDSHISQLNVQDGQEVHKGDPLLALDTT--------------------------- 97

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                            + +  D   ++      + N         +      +    ++
Sbjct: 98  ---------------PLQIEYRDGQAQFLKARQSLRNLRAWENSNEVMSAQRALIMAEMS 142

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             D  ++              L   + L+ +  +++++ +   + +    LEL+      
Sbjct: 143 ERDAVSQ--------------LNAAQPLYRQGIIARSERDSLVQQLANRRLELQAARQAL 188

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +     +                        +    +   KL  +   +    + +P  
Sbjct: 189 TSARASGSAENQTV-----------------AELELNNAEQKLQQIRDQQAHGWLYAPGD 231

Query: 298 GTIVYNQ--------SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           G  V  Q                   + L  ++        RAK     I H++ G   T
Sbjct: 232 GYAVRIQNDDKDKIAFPRLGQRVGAGEALF-MLAGVTRFDARAKADEADIDHLRPGMPVT 290

Query: 350 VRFPHYADIREKKFKAIIEKIDP 372
           +          +     +  + P
Sbjct: 291 LTSEALP---GQPLAGTLRMVSP 310


>gi|328943896|ref|ZP_08241361.1| hypothetical protein HMPREF0091_10586 [Atopobium vaginae DSM 15829]
 gi|327491865|gb|EGF23639.1| hypothetical protein HMPREF0091_10586 [Atopobium vaginae DSM 15829]
          Length = 453

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 68/240 (28%), Gaps = 45/240 (18%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA-------NYLKEISR 264
           +QN LN  ++ V  +           +  L   N        +           +     
Sbjct: 153 AQNQLNVAKKQVKSARDAYSRAYASYRKALNEYNSAPSAEVQKALPDPDTVYESVASAQS 212

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ--------SFSSSNYAQQSQ 316
            ++Q +       S +    +   ++T+++P  G ++           S ++       Q
Sbjct: 213 AIDQAKLAADQAQSAVDDAREKANKRTVVAPCDGNVITMNAKRGAAVGSLTAGMAGSIGQ 272

Query: 317 PLMKIVPHSKLTY---------IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                 P + +           +R  V+   I  +K G  A V F     +      A++
Sbjct: 273 N-----PENGILIQIADLSKMRVRLSVSEIDISAIKPGQQAKVTFSALPGVT---CDAVV 324

Query: 368 EKIDPIISQQ--------DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           E I                    T   Y V + I        +  ++ G  A+V    + 
Sbjct: 325 ENIASTAENAAVSPSQMGAATSNTMANYAVDVLID-----KPHESIKCGMTADVEIVTQE 379



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 56/184 (30%), Gaps = 14/184 (7%)

Query: 15  ASLKRMTLLSIIGIIGLITW-----SILLPIEIS--------VSSSGEILNEDNVVEIKS 61
           + L    L  I G++G         +   P+           + +SG      N   +  
Sbjct: 57  SILGICVLFIIAGVVGSFLSKSHNSAQDAPLATVEKHDFTSTIKTSGTAEPVSNT-VVTP 115

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              GII + +V  G+ + +G  L T ++      +   +  +   +  + + + A     
Sbjct: 116 EVDGIIDEVRVNQGANVKKGDVLFTIKNDTLDKAVQTAQNQLNVAKKQVKSARDAYSRAY 175

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
             Y      + S     +        T  +      S++ ++         ++   R   
Sbjct: 176 ASYRKALNEYNSAPSAEVQKALPDPDTVYESVASAQSAIDQAKLAADQAQSAVDDAREKA 235

Query: 182 ENKS 185
             ++
Sbjct: 236 NKRT 239


>gi|160884594|ref|ZP_02065597.1| hypothetical protein BACOVA_02583 [Bacteroides ovatus ATCC 8483]
 gi|156110333|gb|EDO12078.1| hypothetical protein BACOVA_02583 [Bacteroides ovatus ATCC 8483]
          Length = 416

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 89/249 (35%), Gaps = 19/249 (7%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + ++         +M +     +++E KS  L+    ++  +L  +K         ++  
Sbjct: 110 LRNIEDQRDEWEKQMITYQEQEIEMEQKSLNLKQQALTNSYELERLK---------KSIA 160

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             +E        + +  + E +   +  N    + +L   + +  I ++L +N R    E
Sbjct: 161 LDREEFQMGVKSKAQLQVAEDEYCYKQKNAALQQESLRHDSAVTMIRKELIRNDRER--E 218

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
             K     +      + +P+ G + + +  +        + + +I        I   ++ 
Sbjct: 219 RKKYERTRERLNSLVVTAPLKGQLSFVKV-TPGQQVSSGESIAEIK-VLDQYKIHTSLSE 276

Query: 337 KQIQHVKKGYTATVRF--PHYADIREKKFKAIIEK---IDPIISQQ-DNNLQTQEYYEVI 390
             I  +  G  ATV +    Y     K    + ++   ID I +    +N++  + + V 
Sbjct: 277 YYIDRITTGLPATVNYQGNKYPLKITKVVPEVKDRMFDIDLIFTGDMPDNVRVGKSFRVQ 336

Query: 391 LKITDLAFS 399
           +++     +
Sbjct: 337 IELGQPEQA 345


>gi|332300192|ref|YP_004442113.1| efflux transporter, RND family, MFP subunit [Porphyromonas
           asaccharolytica DSM 20707]
 gi|332177255|gb|AEE12945.1| efflux transporter, RND family, MFP subunit [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 353

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 59/204 (28%), Gaps = 16/204 (7%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              + D   + +++ +   E      E   +     +   E   +  +      + L   
Sbjct: 85  YADEGDHVSKGKLLIQLDAETLRADAEASRVAYEAAKKDYERFQQAHDQGGVTDQQLSTM 144

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                    +           +I +PI+G I   +     +Y      L  IV       
Sbjct: 145 HTQMVAAQGRYISSRSRLTDASIKAPISGQIYK-RYVEVGSYVNPGTKLFDIV-DDSQLK 202

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
               VT +Q   + KG T TV    Y          I  KI  +  + ++ L     + V
Sbjct: 203 ASCFVTERQRLQLTKGQTVTVESELYPGQT------ITGKISMVGDKANHALA----FPV 252

Query: 390 ILKITDLAFSDNNIELRNGFPAEV 413
            + +   +       LR G    V
Sbjct: 253 DVTLDKQSAEG----LRPGMYVSV 272



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 48/115 (41%), Gaps = 5/115 (4%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +++G +    ++  + S   G I     + G  + +G  L+  +        +  +V+ +
Sbjct: 60  TANGLVEGVQDLSFVSSL-GGRIVSLYADEGDHVSKGKLLIQLDAETLRADAEASRVAYE 118

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +   +  + A D    +  V ++   +   Q++   G+Y S+ S++ +  I +
Sbjct: 119 AAKKDYERFQQAHD----QGGVTDQQLSTMHTQMVAAQGRYISSRSRLTDASIKA 169


>gi|268316446|ref|YP_003290165.1| efflux transporter, RND family, MFP subunit [Rhodothermus marinus
           DSM 4252]
 gi|262333980|gb|ACY47777.1| efflux transporter, RND family, MFP subunit [Rhodothermus marinus
           DSM 4252]
          Length = 397

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 80/231 (34%), Gaps = 19/231 (8%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           + L A  S   + L  + +  E+ A+ ++ D       + ++  +L       +  L + 
Sbjct: 77  ATLSAQASGTVEYLAPLGSRVEEGALLARLDQTLARAALKQAEAQLASARAAYELALDNF 136

Query: 245 NELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                       + L+   +    +Q +       + +    K      I +P AGT+  
Sbjct: 137 RRQEPLFRDSIISALEFENVRAQRDQAEAQLRLAEAAVEQARKQLAHTEIRAPFAGTV-E 195

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                        QP++++V + +   +RA V  +  + V+ G +  +RF  Y       
Sbjct: 196 THFVDVGEQIAMGQPVVRLV-NLRQVKVRAGVPERYARDVRVGTSVELRFQAYG---LPP 251

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            +A +  +   I   +        + V +++      + + +L+      V
Sbjct: 252 RQATVTFVGNAIDPANRT------FPVEVRLD-----NPDGQLKPEMVVRV 291



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/96 (9%), Positives = 28/96 (29%), Gaps = 2/96 (2%)

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           GS++ +G  L   +       +   +  + +       E +  +F   +    +    + 
Sbjct: 94  GSRVEEGALLARLDQTLARAALKQAEAQLAS--ARAAYELALDNFRRQEPLFRDSIISAL 151

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           E + +           ++    +    + L     R
Sbjct: 152 EFENVRAQRDQAEAQLRLAEAAVEQARKQLAHTEIR 187


>gi|194215180|ref|XP_001917151.1| PREDICTED: similar to rCG59523 [Equus caballus]
          Length = 4566

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 60/199 (30%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E++  +   +     S
Sbjct: 1480 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEQEAQELQRRIQEEVS 1539

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + S  +   ++         +  ++  K+  + A   +  +    ++       
Sbjct: 1540 RGKKATVDSHQQKRSIQEELQPLRQRSEAEIHAKARQVEAAERNRLRIEEEIR------- 1592

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1593 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDETQRK-RQAE 1651

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1652 AELAVRVKAEAEAAREKQR 1670



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 76/229 (33%), Gaps = 17/229 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2202 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSLRVQ 2255

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2256 MEELGKLKARIEAENRALILRDKDNTQRVLQEEAEKMKHVAEEAARLSVAAQEAARLREL 2315

Query: 195  HQKDLTMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++DL   + L EK       AV +    + E  + +   EL +   + + +     ++ 
Sbjct: 2316 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQ--EQARRLQEDKEQMA 2373

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             +   E   + + +  +  Q Q   + E  +L +      +    +   
Sbjct: 2374 QQLEQETQGFQRTLEAE-RQRQLEMSAEAERLKLRVAEMSRAQARAEED 2421



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 70/211 (33%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFE----SREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   D  N +  + E+A +    + E   L    +  +
Sbjct: 2251 SLRVQMEELGKLKARIEAENRALILRDKDNTQRVLQEEAEKMKHVAEEAARLSVAAQEAA 2310

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2311 RLRELAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2370

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2371 QMAQQLEQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2430

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2431 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2461



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 67/200 (33%), Gaps = 12/200 (6%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + + LR  +  E+ A      + +  ++  E+  E       +  +   +       
Sbjct: 1772 QLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1831

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLN 217
               R L     + R        L  +  L+R  L +  +     + L E+     Q++  
Sbjct: 1832 EKQRQLAEGTAQQR--------LAAEQELIR--LRAETEQGEQQRQLLEEELARLQHEAA 1881

Query: 218  QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               +   +   EL +   E + +L       +E+        + +  +     R  A+E 
Sbjct: 1882 AATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAE-ASRFRELAEEA 1940

Query: 278  SKLTILEKTREQKTILSPIA 297
            ++L  L +  +++  L+   
Sbjct: 1941 ARLRALAEEAKRQRQLAEED 1960



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 19/182 (10%), Positives = 54/182 (29%), Gaps = 6/182 (3%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF----ESREEQLL 139
            L   +  +   L +                K+  + L  + ++ ++      E +E+   
Sbjct: 2315 LAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQ 2374

Query: 140  DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                +       +       +  S + +  ++R   ++R     +    R    + +   
Sbjct: 2375 QLEQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGE 2434

Query: 200  TMMK-NLFEKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN 257
             + +  L  +  V+     + +R       E LR+ I E +     + +      L+   
Sbjct: 2435 KLHRTELATQEKVTLVQTLEIQRQQSDHDAERLRQAIAELEREKEKLKQEAKLLQLKSEE 2494

Query: 258  YL 259
              
Sbjct: 2495 MQ 2496



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 58/181 (32%), Gaps = 3/181 (1%)

Query: 114  KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRM 171
            +S  + +  +Y  L   +         ++     T  ++              + +L  +
Sbjct: 1443 QSGSESVIQEYVDLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEV 1502

Query: 172  RSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             +    +  L    +  +A      ++L   ++    +   +  D +QQ+R + +    L
Sbjct: 1503 EAALEKQRQLAEAHAQAKAQAEQEAQELQRRIQEEVSRGKKATVDSHQQKRSIQEELQPL 1562

Query: 231  RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            R+    + +      E  +   L     ++ +   LE  +R       +L  L    E+ 
Sbjct: 1563 RQRSEAEIHAKARQVEAAERNRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEA 1622

Query: 291  T 291
             
Sbjct: 1623 E 1623



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 70/206 (33%), Gaps = 13/206 (6%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTCS 150
              +   L+ ++ +  R     E+ A         VL +   +  E   L    +      
Sbjct: 1937 AEEAARLRALAEEAKRQRQLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEK 1996

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +  N  +  +      +  R+       + D+E + + LR    + + +L   K L E  
Sbjct: 1997 EAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRK---ASESELERQKGLVE-- 2051

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQ 268
                 D  +Q R V +  L L+ +  +       +            + L+ +   +LE 
Sbjct: 2052 -----DTLRQRRQVEEEILALKVSFEKAAAGKAELELELGRIRSNAEDTLRSKEQAELEA 2106

Query: 269  NQRTFADEMSKLTILEKTREQKTILS 294
             QR  A E  +     + R QK++ +
Sbjct: 2107 RQRQLAAEEEQRRREAEERVQKSLAA 2132



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1593 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDETQR 1646

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR   +   + + +  
Sbjct: 1647 KRQAEAE--LAVRVKAEAEAAREKQRALQALEEFRLQAEEAERRLRQAEAERARQVQVAL 1704

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L   + E+   +  +    E   +   E     +
Sbjct: 1705 ETAQRSA--EVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEAERRAQQQAEAERARE 1762

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1763 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1794



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 69/224 (30%), Gaps = 15/224 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE+  +     +     + 
Sbjct: 1688 RLRQAEAERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERTLQEEHVAVAQLREEA 1747

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1748 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1807

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLR-----HINELYDE 250
                     E+ AV Q +L +QE    +   E   ++ +  ++ ++R        E   +
Sbjct: 1808 REARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1867

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E    L+  +    Q ++    E++K+    +        +
Sbjct: 1868 LLEEELARLQHEAAAATQKRQELEAELAKVRAEMEVLLASKARA 1911


>gi|170022735|ref|YP_001719240.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia
           pseudotuberculosis YPIII]
 gi|254801261|sp|B1JKI2|AAEA_YERPY RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|169749269|gb|ACA66787.1| secretion protein HlyD family protein [Yersinia pseudotuberculosis
           YPIII]
          Length = 311

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 83/253 (32%), Gaps = 27/253 (10%)

Query: 204 NLFEKN----AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            L +K      + Q    Q            +    E++      + L  +A  +    +
Sbjct: 67  QLVQKGQILFVIDQPRYQQALAEAEADVAYYQTLAAEKQRESSRRHRLGIQALSQ--EEI 124

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            + S  L+  Q   A  ++   +     E+ T+ +P  G +      +   +  +    +
Sbjct: 125 DQASNVLQTVQHQLAKAIAVRDLARLDLERTTVRAPAEGWVTNLNVHA-GEFINRGATAV 183

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +V      YI A +   +++ VK GY A +        R       ++ I   ++   +
Sbjct: 184 ALV-KKDTFYILAYLEETKLEGVKPGYRAEI--TPLGSNR--ILHGTVDSISAGVTNSSS 238

Query: 380 NLQTQEYYEV-----------ILKITDLAFSDNNIELRN-GFPAEVLFTA-KNTTLAQEI 426
           +  ++    +            + +     S++   L   G  A V+ T   +    Q  
Sbjct: 239 SADSKGLATIDNNLEWVRLAQRVPVKIHLDSEDQQYLYPAGTTATVVITGPNDRDPHQ-- 296

Query: 427 IHPITDNWPKIFE 439
           + P+T    ++ E
Sbjct: 297 VSPMTKLMHRLRE 309



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/219 (10%), Positives = 62/219 (28%), Gaps = 10/219 (4%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCH 109
             +VV I    SG++ +  V++   + +G  L   +       +   +  +     L   
Sbjct: 44  TADVVAIAPDVSGLLTEVPVKDNQLVQKGQILFVIDQPRYQQALAEAEADVAYYQTLAAE 103

Query: 110 IDTEKSALDFL------NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              E S    L        + D      ++ + QL   +         +    + +    
Sbjct: 104 KQRESSRRHRLGIQALSQEEIDQASNVLQTVQHQLAKAIAVRDLARLDLERTTVRAPAEG 163

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
               L      ++NR                   + T ++   +    ++       RI+
Sbjct: 164 WVTNLNVHAGEFINRGATAVALVKKDTFYILAYLEETKLEG-VKPGYRAEITPLGSNRIL 222

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + +   +   +    +          + NLE+    + +
Sbjct: 223 HGTVDSISAGVTNSSSSADSKGLATIDNNLEWVRLAQRV 261


>gi|154251955|ref|YP_001412779.1| secretion protein HlyD family protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154155905|gb|ABS63122.1| secretion protein HlyD family protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 357

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/300 (9%), Positives = 86/300 (28%), Gaps = 11/300 (3%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +      R +++    G + +    +   G +S+   L+    ++    +    ++++  
Sbjct: 52  IAAKTPGRVQEMFVDEGDFVTAGEILVKLGTASLEAQLRQAEAQLHQAVIGVESVKSQVE 111

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +A  ++    +   +   +    +Q+ LN+ E++  K T   +    ++         
Sbjct: 112 QRQAEKAAATAVVAQRRAELD---AAQSRLNRTEQLTSKGTASRQTLDDDRARFQAAKAA 168

Query: 247 LYDEANL--EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +             +      +   +       + +  L+   E  T+L+P  G I Y +
Sbjct: 169 VSAAEAQLAASDAAIATAKSQVIGAEAEVEAGRATIERLKADIEDATLLAPRDGRIQY-R 227

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ-IQHVKKGYTATVRFPHYADIREKKF 363
                        ++ ++  S +        P      V  G    +             
Sbjct: 228 VTQPGEVVAAGGKVLNMIDVSDVYM--TFFLPTDAAGRVALGAEVHLVLDAAPQYVIPAT 285

Query: 364 KAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
              +  +     +  +  + + +  + V   I       +   ++ G P           
Sbjct: 286 ATFVADVAQFTPKTVETLDEREKLMFRVKASIDPDLLRKHIRNVKTGLPGMAYVRLDPRV 345



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 50/152 (32%), Gaps = 2/152 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V+ G  +  G  L+          +   +  +      +++ KS ++    + 
Sbjct: 58  GRVQEMFVDEGDFVTAGEILVKLGTASLEAQLRQAEAQLHQAVIGVESVKSQVEQRQAEK 117

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                    R  +L     + +   ++      ++  ++L     R ++        E +
Sbjct: 118 AAATAVVAQRRAELDAAQSRLN--RTEQLTSKGTASRQTLDDDRARFQAAKAAVSAAEAQ 175

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +   A +++ +  +   +   E    +   L
Sbjct: 176 LAASDAAIATAKSQVIGAEAEVEAGRATIERL 207


>gi|153209105|ref|ZP_01947248.1| auxiliary transport protein, membrane fusion protein family
           [Coxiella burnetii 'MSU Goat Q177']
 gi|120575514|gb|EAX32138.1| auxiliary transport protein, membrane fusion protein family
           [Coxiella burnetii 'MSU Goat Q177']
          Length = 326

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 59/403 (14%), Positives = 126/403 (31%), Gaps = 89/403 (22%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L R     + G++ L   S   P+ +     G+ +   + V      SG++K   V  G
Sbjct: 2   RLIRPIFWLLFGMLLLSGCSKNQPVLLQGYVEGQFIYLSSSV------SGLLKSLLVYRG 55

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +   L   +        + ++  ++  +  +  EK  L+ L               
Sbjct: 56  DSVKEDQTLFILDP-------EPQQSELQEAKAKLTQEKENLENL--------------- 93

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                  G+  +  +++      ++   +  + T  R  +L R+   +K  L +A     
Sbjct: 94  -----VKGQRQTILNRIIAEREQAIADMIYAQQTLTRFQHLYRVRAISKDELDKATADYK 148

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                      +K  V+Q + N  E             + E+K+++     + D A    
Sbjct: 149 ----------AKKQIVNQTEANLAE-----------AQLGERKHLILAQQAVVDAAQANV 187

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  + E                          +QKT+++P  G I     F    Y    
Sbjct: 188 AKLIWE-------------------------LDQKTVVAPKNGNIFD-TFFKVGEYVPAG 221

Query: 316 QPL-MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           QP+   + P++        +    +  +K G     +       R     A +  I P  
Sbjct: 222 QPVTALLTPNNIKLIF--YIPEPLLSRLKLGTVVEFKCDGCTMQR-----AKVTYISPEA 274

Query: 375 SQQDNNLQTQ-EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 + +Q    +++ ++       N ++   G P +V   
Sbjct: 275 EYTPPIIYSQKSRAKLVYRVECAIPEKNALKFHAGQPVDVYLH 317


>gi|117625873|ref|YP_859196.1| hypothetical protein APECO1_2860 [Escherichia coli APEC O1]
 gi|115514997|gb|ABJ03072.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|323949835|gb|EGB45719.1| HlyD family protein secretion protein [Escherichia coli H252]
          Length = 378

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 94/288 (32%), Gaps = 14/288 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L       
Sbjct: 72  GIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLTEAQANT 131

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             +    +   +    +L    +  +      I    ++   +   ++     +  ++++
Sbjct: 132 TQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQAQIQSQ 191

Query: 185 SSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
              L ++++  Q  +  ++  L E     +  + +     Y + + +R   +     LR 
Sbjct: 192 ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAAALPLRP 248

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +     E   +     ++ S    +         + L       +  +IL      +V  
Sbjct: 249 VMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL-----PVVPG 303

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
            S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 304 GSYQAQGVLQS----LTVVPGTDGVLGTIELDPNADIDALPDGIYAQV 347


>gi|329954105|ref|ZP_08295200.1| efflux transporter, RND family, MFP subunit [Bacteroides clarus YIT
           12056]
 gi|328528082|gb|EGF55062.1| efflux transporter, RND family, MFP subunit [Bacteroides clarus YIT
           12056]
          Length = 391

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 48/102 (47%), Gaps = 3/102 (2%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           VEI+   SG I K  V+ GS + +G  L + + ++    ++  K +++  +  ++T++  
Sbjct: 57  VEIRPMVSGFITKLHVDEGSVVRKGQVLFSIDPVQYQAAVNSAKAAVETAKAAVNTQELT 116

Query: 117 LD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++    LN K  + +   +  E QL     +     +++ N 
Sbjct: 117 VNNKRTLNQKNIISDYDLQMAENQLAQTKAQLAQAEAQLVNA 158



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 25/99 (25%), Gaps = 3/99 (3%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFAD 275
           Q +  V  +   +             +N           +   L+     L Q +   A 
Sbjct: 91  QYQAAVNSAKAAVETAKAAVNTQELTVNNKRTLNQKNIISDYDLQMAENQLAQTKAQLAQ 150

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             ++L   +      ++ SP  G +         +    
Sbjct: 151 AEAQLVNAKNNLSYTSVTSPSDGIVGTIPYR-VGSLVSP 188


>gi|299133436|ref|ZP_07026630.1| efflux transporter, RND family, MFP subunit [Afipia sp. 1NLS2]
 gi|298591272|gb|EFI51473.1| efflux transporter, RND family, MFP subunit [Afipia sp. 1NLS2]
          Length = 402

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 51/156 (32%), Gaps = 20/156 (12%)

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              ++Q Q TF    + +   E    QK + +P  G  +  +      Y         IV
Sbjct: 166 QATVDQAQATFDQASASVARTEAVISQKLVRAPFDGQ-LGVRRVEVGQYLSAGT---LIV 221

Query: 323 PHSKLTYIRAKVTP--KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + L+ + A +T   K    +  G    +    Y       F+  I  I+P IS    N
Sbjct: 222 TLTDLSKVYANITVTEKDRAIIAVGQEVQILVDAYPGRT---FEGKITTIEPQISSDTRN 278

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                   V ++ T     +    L+ G  A V   
Sbjct: 279 --------VRVQAT---LDNPEHLLKPGMFATVSIV 303



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/107 (13%), Positives = 36/107 (33%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +     G+ + +G PL+   D      +   K    N +  +D  K+ L      
Sbjct: 106 SGRVTQILFTAGATVKKGDPLVQLFDAPDQADLVSFKAQTLNAQLALDRAKALLARSFGP 165

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              +++A  + ++              K+            ++++ +
Sbjct: 166 QATVDQAQATFDQASASVARTEAVISQKLVRAPFDGQLGVRRVEVGQ 212


>gi|283778794|ref|YP_003369549.1| secretion protein HlyD [Pirellula staleyi DSM 6068]
 gi|283437247|gb|ADB15689.1| secretion protein HlyD family protein [Pirellula staleyi DSM 6068]
          Length = 361

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 72/194 (37%), Gaps = 8/194 (4%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQV---ENGSQILQGTPLLTFEDIETTDLID 97
           E SV+  G +      +E+ +  SGI+ +        G+ + +G PLL  +D +    + 
Sbjct: 47  ESSVAGVGVVEAASENLEVGAAQSGIVLELYYPPHRVGATVKEGEPLLKIDDRQLQAQLK 106

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + + ++++ +  +    + L+      D+     + R  Q             +      
Sbjct: 107 VNQANLRSAQASL----AELEQRPRAEDLPPAEAKVRTAQANLQKSLDRYKRLEQLMASN 162

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           ++    L      + +        E +  LL+A     +K++        +  V Q +  
Sbjct: 163 ATSQEDLNQTRYTVEASRYEVEAAEAEYKLLKAGTWDPEKEVARAAVDAAQANVEQIE-T 221

Query: 218 QQERIVYKSTLELR 231
           + ER + ++ ++ +
Sbjct: 222 EIERSIVRAPIDGQ 235



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 62/222 (27%), Gaps = 20/222 (9%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           + +  +  V   +    +   +S +            A     E LL    +      KV
Sbjct: 48  SSVAGVGVVEAASENLEVGAAQSGIVLELYYPPHRVGATVKEGEPLLKIDDRQLQAQLKV 107

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               + S   SL     R R+  L     E K    +A L         ++ L   NA S
Sbjct: 108 NQANLRSAQASLAELEQRPRAEDL--PPAEAKVRTAQANLQKSLDRYKRLEQLMASNATS 165

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q DLNQ    V  S  E+     E K +     +   E      +  +     +      
Sbjct: 166 QEDLNQTRYTVEASRYEVEAAEAEYKLLKAGTWDPEKEVARAAVDAAQANVEQI------ 219

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                      E   E+  + +PI G I+             
Sbjct: 220 -----------ETEIERSIVRAPIDGQILQVNVR-KGELVSP 249


>gi|269105193|ref|ZP_06157887.1| membrane-fusion protein [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268160643|gb|EEZ39142.1| membrane-fusion protein [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 378

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 74/193 (38%), Gaps = 16/193 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G I+   + + IKS  +GI+ +  V+ G ++ QG PL+      T   +   
Sbjct: 42  IEKRAVAVGNIVPA-HSISIKSQINGIVGEIYVKVGEKVKQGQPLIKVRPNPTPQALTDA 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
              +  +R   D E +     N +  V +       +  +    +  S  + V     + 
Sbjct: 101 STDL--MRSEADLESAKQKLANLESLVKQNIIPKNYDGYVSVRSEVKSAQANVLQKRQNL 158

Query: 159 SVYRSLKMKLTRMR-----------SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLF 206
            + RS +  +   R           ++   ++++ E   S   +  ++    L  M +L 
Sbjct: 159 ELIRSGEASIGNSRLTSTIYAPVDGTVLNRKVEVGEPIISTEASQAATEMMSLADMNSLI 218

Query: 207 EKNAVSQNDLNQQ 219
            K +VS++D  Q 
Sbjct: 219 FKGSVSEHDAAQL 231



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 60/179 (33%), Gaps = 16/179 (8%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L      + +S  +L     +  N+   + +     N    +   + +K    ++ Q ++
Sbjct: 97  LTDASTDLMRSEADLESAKQKLANLESLVKQNIIPKNYDGYVSVRSEVKSAQANVLQKRQ 156

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHS 325
                 S    +  +R   TI +P+ GT++  +              Q +  +M +    
Sbjct: 157 NLELIRSGEASIGNSRLTSTIYAPVDGTVLNRKV-EVGEPIISTEASQAATEMMSLA-DM 214

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                +  V+      +  G    +    Y D+   +   ++ K+  I S+  N+ +  
Sbjct: 215 NSLIFKGSVSEHDAAQLSPGMPVLLTLAPYPDV---EISGVLTKV-AIQSENLNSPEGN 269


>gi|260817685|ref|XP_002603716.1| hypothetical protein BRAFLDRAFT_126882 [Branchiostoma floridae]
 gi|229289038|gb|EEN59727.1| hypothetical protein BRAFLDRAFT_126882 [Branchiostoma floridae]
          Length = 1139

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 78/218 (35%), Gaps = 17/218 (7%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV----------LEKAFES 133
           + T +     +  + +++ +  LR  ++  ++ L+ L N+               K  E 
Sbjct: 150 IATLDKEMAEEKCEAQQLEVDQLRERLEEAQTDLELLKNEIATSGTEGAATSFQVKQMEE 209

Query: 134 REEQLLDF------LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +  +L D       L +     ++     I      LK    +   +     + E     
Sbjct: 210 QNNRLRDALVKMRDLSQSEKQENQKLQKEIDKNNSQLKTLTQQKEKLSKEVEEAEATVDE 269

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L+  + +      M+++L E+N   +  + + E  V         +   Q++   +  E+
Sbjct: 270 LKEQVDAALGAEEMVEHLTERNLQQEERIQELEEQVGDLEAMHEMDEEMQESARDNEIEM 329

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
            +E ++   + ++E  R LE +Q   AD    +T    
Sbjct: 330 REEIDM-ANSKVREFQRKLEASQEMIADLQQTITKYRD 366


>gi|15804023|ref|NP_290059.1| hypothetical protein Z4886 [Escherichia coli O157:H7 EDL933]
 gi|12518179|gb|AAG58620.1|AE005573_3 putative membrane protein [Escherichia coli O157:H7 str. EDL933]
          Length = 355

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 48/402 (11%), Positives = 121/402 (30%), Gaps = 78/402 (19%)

Query: 23  LSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  + 
Sbjct: 13  VGLLAVAAIVXWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVR 70

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +L 
Sbjct: 71  EGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELD 130

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               ++  + S      IS+  + L        S        + + S  +A + + + ++
Sbjct: 131 SVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI 188

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                                       ++ +  +   +   R I    D++ L+     
Sbjct: 189 ----------------------------IQAQTRVEAAQATERRIAADIDDSELK----- 215

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                                             +P  G + Y +             ++
Sbjct: 216 ----------------------------------APRDGRVQY-RVAEPGEVLAAGGRVL 240

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--Q 377
            +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     +  +
Sbjct: 241 NMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVE 299

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            ++ + +  + V  +I       +   ++ G P         
Sbjct: 300 TSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|327190285|gb|EGE57383.1| putative efflux transporter protein [Rhizobium etli CNPAF512]
          Length = 394

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 55/160 (34%), Gaps = 13/160 (8%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+ SG ++  D  V        I+   +VE G ++  G  L+  +D      +   ++S 
Sbjct: 117 VTGSGYVVAPDTAVVFSKYEGRIVA-VEVEEGDKVAVGQVLVRLDDAGARFALRGAEISW 175

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +     +     AL    +    +E+            L    +  ++      ++   +
Sbjct: 176 RAAELVLAARNIALAQARSSLTRIER------------LAGRDAMSAQALEEAKTAFDTA 223

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                   + +   RLD++     + AL+ +     T+ +
Sbjct: 224 ENGAEQARQHLEKARLDIDRAREQVEALVLTAPISGTVTR 263



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 65/216 (30%), Gaps = 23/216 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKN--MLRHINELYDEANLEFANYLKEISRDLEQN 269
           ++      E ++    + L +          L   + +  +A  E            EQ 
Sbjct: 171 AEISWRAAELVLAARNIALAQARSSLTRIERLAGRDAMSAQALEEAKTAFDTAENGAEQA 230

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY------AQQSQPLMKIVP 323
           ++        +    +  E   + +PI+GT+    +             ++++ L+ I  
Sbjct: 231 RQHLEKARLDIDRAREQVEALVLTAPISGTVTRLDAHVGDTVLSREDSVRENESLLTIA- 289

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            +    I A V    I  ++ G         + D     F   + KI P+IS++      
Sbjct: 290 DTASLVIDADVAETNIALMRPGLAGEAVLDGFPDQ---PFAVELAKIAPVISREKGTATL 346

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                       L+F+     +R    A +      
Sbjct: 347 -----------RLSFTSPPSGIRPAMAARIRLVVGE 371


>gi|254525061|ref|ZP_05137116.1| membrane fusion protein [Stenotrophomonas sp. SKA14]
 gi|219722652|gb|EED41177.1| membrane fusion protein [Stenotrophomonas sp. SKA14]
          Length = 414

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 60/200 (30%), Gaps = 14/200 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +     G +       G ++ QG  L   +        D    + 
Sbjct: 67  ASALGTVTA-MNTVTVSPQVGGQLMSLNFREGQEVKQGDVLAVIDPRTAQASYDQAAAAK 125

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +     + T +S     N       V +   +++  Q+  +     +  + + +  +   
Sbjct: 126 RQNEALLATARSNFQRSNAPEYRQYVAKTDLDTQRNQVAQYESAVAANEASMRSAQVQLQ 185

Query: 161 YRSLKMKLTRMRSIYLNRLD----------LENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           Y  +   ++ +  I                   +   +  L +  ++ L  ++       
Sbjct: 186 YTKVTAPISGIAGIRAVDAGNVVNAGTALVTLTQIHPIHVLFNLPERQLGDVRQAQAAGT 245

Query: 211 VSQNDLNQQERIVYKSTLEL 230
           V    L++ +  V     +L
Sbjct: 246 VPVAALDRADSHVLSGDGKL 265



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 56/169 (33%), Gaps = 11/169 (6%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANL-EFANYLKEI-----SRDLEQNQRTFA 274
           R    S  +      + + +L      +  +N  E+  Y+ +         + Q +   A
Sbjct: 112 RTAQASYDQAAAAKRQNEALLATARSNFQRSNAPEYRQYVAKTDLDTQRNQVAQYESAVA 171

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              + +   +   +   + +PI+G I   ++  + N       L+ +       ++   +
Sbjct: 172 ANEASMRSAQVQLQYTKVTAPISG-IAGIRAVDAGNVVNAGTALVTLT-QIHPIHVLFNL 229

Query: 335 TPKQIQHVKKGYTA-TVRFPHYADIREKKF--KAIIEKIDPIISQQDNN 380
             +Q+  V++   A TV                  ++ +D +IS     
Sbjct: 230 PERQLGDVRQAQAAGTVPVAALDRADSHVLSGDGKLDVVDNLISADSGT 278


>gi|182413455|ref|YP_001818521.1| RND family efflux transporter MFP subunit [Opitutus terrae PB90-1]
 gi|177840669|gb|ACB74921.1| efflux transporter, RND family, MFP subunit [Opitutus terrae
           PB90-1]
          Length = 465

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 99/287 (34%), Gaps = 33/287 (11%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLP------------------IEISVSSSGEILNEDNV 56
           + +K + L +++ IIGL   +                      I   V+++G+I  E  V
Sbjct: 19  SRMKWIILAAVVLIIGLGVAAKFASANRQQGALVVTEKAVVKTITQLVNATGKIQPEVEV 78

Query: 57  VEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
               SP  SG I +  +  G+ + +G  L+  +       ++ ++ ++   +      K+
Sbjct: 79  KI--SPEVSGEIIELPLREGAVVKKGDLLVRIKPDNYVYQVEQQEANLTAAKATAVQSKA 136

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS-SVYRSLKMKLTRMRSI 174
            L      +   +  F+ +     DF     S      NY  + +  R  +  L + R +
Sbjct: 137 QLLKAEEDFKRSDDLFKKQLISDSDFTAIRTSLEVAQANYDNALAQIRRTEGLLNQSREL 196

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE-RIVYKSTLELREN 233
                        + +L S   + +    +      +   +LN  E R+       +   
Sbjct: 197 LSKTTIYAPMDGTISSLTSEIGERVVATGSFAGTEVMRVANLNDMEARVNVNENDVVNVK 256

Query: 234 IHEQKNM----------LRHINELYDEANLEFANYLKEISRDLEQNQ 270
           I ++  +          +  + E+   A  +  N  +EI+  L + +
Sbjct: 257 IGDKARITIDAYPGRKFVGTVKEISSAAKTQGLNTQEEITNFLVKVR 303



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 83/258 (32%), Gaps = 58/258 (22%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++     N    +  +   +A L   ++D     +LF+K  +S +D       +  +   
Sbjct: 116 QVEQQEANLTAAKATAVQSKAQLLKAEEDFKRSDDLFKKQLISDSDFTAIRTSLEVAQAN 175

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               + + +     +N+  +                                       +
Sbjct: 176 YDNALAQIRRTEGLLNQSRE------------------------------------LLSK 199

Query: 290 KTILSPIAGTIVYN------QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV- 342
            TI +P+ GTI         +  ++ ++      +M++   +    + A+V   +   V 
Sbjct: 200 TTIYAPMDGTISSLTSEIGERVVATGSF--AGTEVMRVANLND---MEARVNVNENDVVN 254

Query: 343 -KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYYEVILKITDLAFSD 400
            K G  A +    Y   +   F   +++I      Q  N Q +   + V +++ D     
Sbjct: 255 VKIGDKARITIDAYPGRK---FVGTVKEISSAAKTQGLNTQEEITNFLVKVRVGD----- 306

Query: 401 NNIELRNGFPAEVLFTAK 418
            ++ +R G  A V    K
Sbjct: 307 KDVSIRPGMSANVDIETK 324


>gi|331009034|gb|EGH89090.1| hypothetical protein PSYTB_04905 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 333

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 43/123 (34%), Gaps = 4/123 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  SV +  E++     V       G++ +F V+    +  G  LL FE+       D+
Sbjct: 191 PVRQSVLAPAEVVPLGGRVVAAPLD-GVVAEFLVKPNQVVKTGDLLLRFENTTLKAQADV 249

Query: 99  KKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            + ++      +             +++ D+L    E +  +          +  +    
Sbjct: 250 AERALGVAEAELKANSQRSFADAESSSRIDLLAARVEQKRAERDYARELLKRSEVRTERD 309

Query: 156 GIS 158
           GI+
Sbjct: 310 GIA 312


>gi|323525649|ref|YP_004227802.1| RND family efflux transporter MFP subunit [Burkholderia sp.
           CCGE1001]
 gi|323382651|gb|ADX54742.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
           CCGE1001]
          Length = 490

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 53/145 (36%), Gaps = 4/145 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + +++ G +    NV  +    SG ++    + G  + +G  L   +      
Sbjct: 114 AAQGEMPVVLTALGTVTPLANV-TVLPQLSGTLQDVYFKEGQMVRKGDVLAQIDPRPYQI 172

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +D  + ++      + T +  L     L ++  +  +  +++   +  + G   +  + 
Sbjct: 173 SLDNAQGTLARDEALLQTARLDLKRYQTLLSQDSIASQQVDTQASLVRQYEGTVKADKAN 232

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYL 176
           V  Y +  VY  +   ++    +  
Sbjct: 233 VDTYKLDLVYARITAPVSGRVGLRQ 257


>gi|317404066|gb|EFV84522.1| multidrug resistance protein [Achromobacter xylosoxidans C54]
          Length = 286

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 62/172 (36%), Gaps = 6/172 (3%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + D  + +    ++   +R     ++  LR          L  A  L++    L+Q +  
Sbjct: 111 EIDRARFQLAYDQAQASVRSQQVAREQALRDAKRNRSLGQLVAAEALEQSQTKLQQTEAA 170

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A    +L       E+  +L+   G +      +  +YA   + +M +V  +   Y+  
Sbjct: 171 LAQAEVQLNTARLNLERSRVLAVTDGRVTNLDLRA-GSYASAGRGVMALV-DASSFYVEG 228

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                ++  + +G  ATV          ++ +  +E I   I+ +D +    
Sbjct: 229 YFEETKLPGIHEGDPATVTL----MGDNRQIRGHVESIALGIADRDRSTGAN 276



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 48/128 (37%), Gaps = 6/128 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            +  VV++    SG++    V +   +  G  L   +        D  + S+++    + 
Sbjct: 77  VKAYVVQVAPDVSGLVTAVPVHDNQDVKAGDVLFEIDRARFQLAYDQAQASVRSQ--QVA 134

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E++  D   N+      A E+ E+       K   T + +    +      L ++ +R+
Sbjct: 135 REQALRDAKRNRSLGQLVAAEALEQS----QTKLQQTEAALAQAEVQLNTARLNLERSRV 190

Query: 172 RSIYLNRL 179
            ++   R+
Sbjct: 191 LAVTDGRV 198


>gi|293610313|ref|ZP_06692614.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827545|gb|EFF85909.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 446

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 69/191 (36%), Gaps = 26/191 (13%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLP----------------IEISVSSSGEILNEDNVVE 58
             +K + ++  I +I ++ W  L P                IE +V ++G +     ++ 
Sbjct: 5   KPIKLVIIILCIAVIAVLAWKFLKPKEQQPQYITAEVTRGDIENNVLATGTLDA-TKLIS 63

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SG +KK  V+ G Q+ QG  +   +     + +     +IKNL      + ++L+
Sbjct: 64  VGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSTTQENSLKTSDANIKNLEAQRLQQVASLN 123

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                    EK  E R +Q +           +       +    +K    ++ S  + +
Sbjct: 124 ---------EKQLEYRRQQQMYAQDATPRADLESAEASYKTAQAQIKALDAQIESAKVTK 174

Query: 179 LDLENKSSLLR 189
              +      R
Sbjct: 175 STAQTNIGYTR 185



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 79/232 (34%), Gaps = 32/232 (13%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDL 266
             ++Q D   QE  +  S   ++    ++   +  +NE   E   +   Y ++     DL
Sbjct: 87  QLIAQIDSTTQENSLKTSDANIKNLEAQRLQQVASLNEKQLEYRRQQQMYAQDATPRADL 146

Query: 267 EQNQRTFADEMSKLTILEKTRE--------------QKTILSPIAGTIVYNQSFSSSNYA 312
           E  + ++    +++  L+   E                 I++P  GT+V           
Sbjct: 147 ESAEASYKTAQAQIKALDAQIESAKVTKSTAQTNIGYTRIVAPTDGTVVAI-VTEEGQTV 205

Query: 313 QQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +Q    IV  +  +   I+A+V+   I  V+KG      F    D  ++       + 
Sbjct: 206 NANQSAPTIVKIAKLQNMTIKAQVSEADIMKVEKGQQVY--FTTLGDETKRYATLRQIEP 263

Query: 371 DPIISQQDNNLQTQE------YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            P     ++   T        YY  +  +      + + +LR    A+V   
Sbjct: 264 APDSISSESTSSTNSTTSSAVYYNALFDVP-----NTDGKLRIDMTAQVYIV 310


>gi|113868387|ref|YP_726876.1| multidrug resistance efflux pump [Ralstonia eutropha H16]
 gi|113527163|emb|CAJ93508.1| multidrug resistance efflux pump [Ralstonia eutropha H16]
          Length = 349

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 61/182 (33%), Gaps = 9/182 (4%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
             ++ I+  +TW +    +     + +   +  VV + +  SG + K  V N   +  GT
Sbjct: 3   WVLLLIVISLTWYLFA--DRLTPYTQQARVQAFVVPVAAEVSGRVTKVHVRNNQDVAAGT 60

Query: 83  PLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            L   +              ++  +  I      I++ +++L           +  +  E
Sbjct: 61  VLFEVDPQHYKIAVDRARADLESTRRQIGASTAGIESAQASLRAARANELKARQDRDRLE 120

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
               D  G       +V    +      +      ++     +   E +++ LR+  ++ 
Sbjct: 121 RLYSDDPGTISLRRLEVARASLEQAVSQVAAAKAEVQRAREQQGGSEEENAKLRSAATAL 180

Query: 196 QK 197
           +K
Sbjct: 181 EK 182


>gi|34497430|ref|NP_901645.1| NolF secretion protein [Chromobacterium violaceum ATCC 12472]
 gi|34103285|gb|AAQ59647.1| NolF secretion protein [Chromobacterium violaceum ATCC 12472]
          Length = 376

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 84/312 (26%), Gaps = 57/312 (18%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE----SREEQLLDFLGKYHSTCSK 151
            +    S KN         S  D +  +   L  A                 +  +   +
Sbjct: 31  AEHASASGKNASAPAARRLSGADVVRAEVRPLAAAIPFTGSLNALTSSAVASEVDANVRE 90

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V      SV R   + +    S+  +  +   +    +A L   +  L   + L  K  +
Sbjct: 91  VKVREGESVRRGQLLAVLDAESLGQSVAEQNAQLDNSKARLKLAKVKLDKQRELLGKGFI 150

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           SQ   ++ E        ELR                               S  L + QR
Sbjct: 151 SQVAFDELESDYRVKEGELRAQ-----------------------------SAQLARAQR 181

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           + AD                + SPI G +   +       A ++  L   V    +  I 
Sbjct: 182 SLAD--------------AQVKSPIDGVVYERKIN-PGEVASRNMKLFS-VADLAVLEIA 225

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A V  + +  V+ G  A+                 + +I+P+      +        V +
Sbjct: 226 ATVPSRLVGQVRVGMPASFSVDGRDVQEH----GEVVRINPVAIPGTRSFTLF----VRV 277

Query: 392 KITDLAFSDNNI 403
           + TD        
Sbjct: 278 RNTDGHLKVGQF 289



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 39/108 (36%), Gaps = 3/108 (2%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD---FLNNK 123
           +++ +V  G  + +G  L   +       +  +   + N +  +   K  LD    L  K
Sbjct: 88  VREVKVREGESVRRGQLLAVLDAESLGQSVAEQNAQLDNSKARLKLAKVKLDKQRELLGK 147

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + + AF+  E       G+  +  +++     S     +K  +  +
Sbjct: 148 GFISQVAFDELESDYRVKEGELRAQSAQLARAQRSLADAQVKSPIDGV 195


>gi|149188334|ref|ZP_01866628.1| hypothetical protein VSAK1_19109 [Vibrio shilonii AK1]
 gi|148837923|gb|EDL54866.1| hypothetical protein VSAK1_19109 [Vibrio shilonii AK1]
          Length = 283

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 74/216 (34%), Gaps = 23/216 (10%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +N ++Q +  + K+  EL ++ +  +   R +++         +  L      +  N+  
Sbjct: 79  KNSVSQAKYAMLKAEAELEQSKNSYRRDSRLLSKKLVSEEQVISEKLA-----VAANKAA 133

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                S L   E    +  +++P  G +         NY  + +  + +V  S   YI A
Sbjct: 134 LEQAKSSLAKAELDLSRTKVVAPQDGYVTNLNQR-QGNYINKGETFVALV-ESDTYYILA 191

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT--------- 383
             T  +++ + +G  A +R        +K F   IE I   I  Q  +            
Sbjct: 192 YFTETKVKGLVEGAKANIR----PFSSDKTFVGKIEGIGRAIIDQSADNSGLISNVNPTV 247

Query: 384 ---QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              +    V ++I+       +  L  G    V   
Sbjct: 248 PWVRLAQRVPVRISIPKEVLESERLIAGTTVSVDIQ 283



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 43/124 (34%), Gaps = 4/124 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I    V +   +  G  L   +D +  + +   +     L+   + E+S   +  + 
Sbjct: 50  SGEIVTVAVHDNQFVNAGDLLFAIDDADYKNSVS--QAKYAMLKAEAELEQSKNSYRRDS 107

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             + +K     EEQ++       +  + +     S     L +  T++ +     +   N
Sbjct: 108 RLLSKKLVS--EEQVISEKLAVAANKAALEQAKSSLAKAELDLSRTKVVAPQDGYVTNLN 165

Query: 184 KSSL 187
           +   
Sbjct: 166 QRQG 169


>gi|331653040|ref|ZP_08354045.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli M718]
 gi|331049138|gb|EGI21210.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli M718]
          Length = 288

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 61/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 62  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 120

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 121 AEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 179

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V  +    I      K+      H+++G  A +          K  +  +  I 
Sbjct: 180 KPLFALVDSNSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 230

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 231 RAIYDQS 237



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 4   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 59

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 60  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 119

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 120 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 159


>gi|313106904|ref|ZP_07793107.1| putative membrane fusion protein [Pseudomonas aeruginosa 39016]
 gi|310879609|gb|EFQ38203.1| putative membrane fusion protein [Pseudomonas aeruginosa 39016]
          Length = 375

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 68/210 (32%), Gaps = 27/210 (12%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L Q E  V ++TL   E                  +     +    ++    +   T A+
Sbjct: 96  LIQLESDVEEATLRTAEADLGLARAEYQRGRELIGSKAISKSEFDRLAAQWAKTSATVAE 155

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKV 334
             + L        +K +L+P AGTI   +     +Y     P+  +         +   +
Sbjct: 156 LKAALA-------KKRVLAPFAGTI-GIRQVDVGDYVSPGTPIATL--QDLSTLLLDFHL 205

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             +    + +G    VR   Y     + F A I  I+P +  +  NLQ            
Sbjct: 206 PEQDFPLLSRGQLVKVRVSAYP---GQVFDAEIAAINPKVDNETRNLQV----------- 251

Query: 395 DLAFSDNNIELRNGFPA--EVLFTAKNTTL 422
             A  + + +L  G  A  EV+   +   +
Sbjct: 252 RAALENPDGKLLPGMFANLEVMLPGEEQRV 281


>gi|281356420|ref|ZP_06242912.1| efflux transporter, RND family, MFP subunit [Victivallis vadensis
           ATCC BAA-548]
 gi|281317112|gb|EFB01134.1| efflux transporter, RND family, MFP subunit [Victivallis vadensis
           ATCC BAA-548]
          Length = 439

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 64/214 (29%), Gaps = 26/214 (12%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE----------ISRD 265
           +   +  + +S  +L+      K     +      A  E+ +   E              
Sbjct: 123 ILSAQASIKQSRAKLKLAESNWKRAQ-QLFPQKAMAESEYDDAQSEYFAAVAAVLVAEAS 181

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVP 323
           L Q     A   + L   ++  +   I SP+ G I+  +            +  +  I  
Sbjct: 182 LAQANAQLATAEASLDKAQRNLDYCVISSPVDGVIIDRRVSIGQTVVSSMSASSIFLIAK 241

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             K   +   V    I  +K+G   T     + D     F+  + KI  + +    N+ T
Sbjct: 242 DLKRMQVWVSVNEADIGSIKQGMPVTFTVDAFPDRT---FQGEVYKI-RLNATMSQNVVT 297

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEV-LFT 416
              Y V +        +++  L     A V    
Sbjct: 298 ---YVVEVSTD-----NSDGVLLPYLTANVKFIK 323



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 54/169 (31%), Gaps = 15/169 (8%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIK------KFQVENGSQILQGTPLLTFEDIE 91
             I  ++S++G +  E+ V         I+          V+ GS++  G  L   +D  
Sbjct: 45  ADIASTISATGTVEPEELVNVGAQVTGKIVSFGTDADGKSVDYGSRVKAGAVLANIDDAT 104

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
               +   K + +     I + ++++     K  + E  ++ R +QL             
Sbjct: 105 YDAEVRSAKAAKQQAEASILSAQASIKQSRAKLKLAESNWK-RAQQLFP--------QKA 155

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
           +               +  +     +      + +   A L   Q++L 
Sbjct: 156 MAESEYDDAQSEYFAAVAAVLVAEASLAQANAQLATAEASLDKAQRNLD 204


>gi|317048062|ref|YP_004115710.1| RND family efflux transporter MFP subunit [Pantoea sp. At-9b]
 gi|316949679|gb|ADU69154.1| efflux transporter, RND family, MFP subunit [Pantoea sp. At-9b]
          Length = 386

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
             +G + ++           GII+K     G ++  G  L   +        D     +K
Sbjct: 53  RVTGTMTSDVRPQV-----GGIIQKRLFTEGDEVKAGQVLYQIDPASYQASYDEAVGQLK 107

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           N    + + K   +    +Y  L K      +   D    Y    + V  Y  +     +
Sbjct: 108 NAVAVVKSSKLKAE----RYAALVKENGVSRQDADDAEATYQQNLASVTQYKAAVESARI 163

Query: 165 KMKLTRMRSIYLNRLDLENKS--SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            +  T++++    R+ + + +  +L+ +  ++    +  +  ++     S   L + +R 
Sbjct: 164 NLNYTQIKAPISGRIGISSVTPGALVTSEQTTALATIRALDPIYVDLTQSSVQLLKLKRQ 223

Query: 223 VYKS 226
               
Sbjct: 224 QASL 227


>gi|313885828|ref|ZP_07819571.1| efflux transporter, RND family, MFP subunit [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312924732|gb|EFR35498.1| efflux transporter, RND family, MFP subunit [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 353

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 59/204 (28%), Gaps = 16/204 (7%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              + D   + +++ +   E      E   +     +   E   +  +      + L   
Sbjct: 85  YADEGDHVSKGKLLIQLDAETLRADAEASRVAYEAAKKDYERFQQAHDQGGVTDQQLSTM 144

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                    +           +I +PI+G I   +     +Y      L  IV       
Sbjct: 145 HTQMVAAQGRYISSRSRLTDASIKAPISGQIYK-RYVEVGSYVNPGTKLFDIV-DDSQLK 202

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
               VT +Q   + KG T TV    Y          I  KI  +  + ++ L     + V
Sbjct: 203 ASCFVTERQRLQLTKGQTVTVESELYPGQT------ITGKISMVGDKANHALA----FPV 252

Query: 390 ILKITDLAFSDNNIELRNGFPAEV 413
            + +   +       LR G    V
Sbjct: 253 DVALDKQSTDG----LRPGMYVSV 272



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 48/115 (41%), Gaps = 5/115 (4%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +++G +    ++  + S   G I     + G  + +G  L+  +        +  +V+ +
Sbjct: 60  TANGLVEGVQDLSFVSSL-GGRIISLYADEGDHVSKGKLLIQLDAETLRADAEASRVAYE 118

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +   +  + A D    +  V ++   +   Q++   G+Y S+ S++ +  I +
Sbjct: 119 AAKKDYERFQQAHD----QGGVTDQQLSTMHTQMVAAQGRYISSRSRLTDASIKA 169


>gi|163803001|ref|ZP_02196887.1| putative secretion protein [Vibrio sp. AND4]
 gi|159173175|gb|EDP58004.1| putative secretion protein [Vibrio sp. AND4]
          Length = 354

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 69/216 (31%), Gaps = 21/216 (9%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                ++ +   +     SL+    +  ++Y  R       +  +A  ++   + + ++ 
Sbjct: 72  LFKIDNRKYKIALEQAELSLQSAYEKEATLYSQREAALANIARAQATYNNAHSEYSRLQK 131

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L ++  +SQ++L+        S   L+      K +   + +   ++             
Sbjct: 132 LLKQKVISQSNLDNAYAQNQVSQATLKAEQQNLKVIEAQLGDKKGQSTAVRI-------- 183

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        + +   +      T+L+P  G +   Q       A  + PL+  VP 
Sbjct: 184 -----------AKNGIEKAQLDLTNTTVLAPSDGVVTNLQL-EVGTMANTNMPLLTFVPT 231

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
               +I A    K +  V + Y A V F        
Sbjct: 232 GS-MWIAADFREKSVAGVNQDYHALVAFDANPGSVY 266


>gi|126463780|ref|YP_001044893.1| RND family efflux transporter MFP subunit [Rhodobacter sphaeroides
           ATCC 17029]
 gi|126105591|gb|ABN78121.1| efflux transporter, RND family, MFP subunit [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 418

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 63/193 (32%), Gaps = 1/193 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + ++V ++G +     V E+ S  SG +   +V+   ++  G PL   +D      +   
Sbjct: 60  LVVTVMATGTVQPTTQV-EVSSELSGTLAAVEVDYNDEVAVGQPLARLDDTRLKAQVANA 118

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S++     ++  ++        Y       +      LD +    +         I+ 
Sbjct: 119 EASLEAAEGRLEQARATALEAAENYRSRSALDQRGVAAHLDLVATEAAHKRAESEVKIAE 178

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             R+L      ++ + L +  + +    +    ++    +               DL + 
Sbjct: 179 ADRTLAAANLEVQRVDLAKAVIRSPIRGIVLDRAAEAGQIVASSLNTPVLFTLAEDLTRM 238

Query: 220 ERIVYKSTLELRE 232
           E  V     ++  
Sbjct: 239 ELRVDIDEADIGR 251



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 18/205 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E+    +               R +    D    E A+   E    + +  RT A   
Sbjct: 128 RLEQARATALEAAENYRSRSALDQRGVAAHLDLVATEAAHKRAESEVKIAEADRTLAA-- 185

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHS-KLTYIRAKV 334
           + L +      +  I SPI G ++  ++  +      S   P++  +        +R  +
Sbjct: 186 ANLEVQRVDLAKAVIRSPIRGIVLD-RAAEAGQIVASSLNTPVLFTLAEDLTRMELRVDI 244

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               I  V+ G  A+ +   Y     K     +                   Y+ +L + 
Sbjct: 245 DEADIGRVRVGNRASFKVDAYPGRSFKAEIVQVRYAPETTDGVVT-------YKAVLSVD 297

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
           +         LR G  A    T   
Sbjct: 298 NGERL-----LRPGMTATATITVAE 317


>gi|23013610|ref|ZP_00053485.1| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 436

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 61/166 (36%), Gaps = 8/166 (4%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSI----IGIIGLITWSILLPIEISVSSSGEILNEDNVV 57
           +   W  L    P +  +  L  I    + +   I  ++L P+ +SV +  E++   N  
Sbjct: 145 YGHAWAVLHHPSPITQWKQKLTGIPKWHLKLAAGIILALLFPVRLSVLAPAEVVAH-NPA 203

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I+SP  G+I+K  V     + +G  L   +    T  +++ K ++   +  +D      
Sbjct: 204 VIRSPMDGVIEKVHVRPNQPVAEGDLLFELDRTTLTGKLEVAKKALSTAQAELDQATQQA 263

Query: 118 DF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            F         V+    E R  +          +  K    G++ +
Sbjct: 264 FFDTKAKGTLAVIRARIEERSAEAAQLEDLMARSQVKAPRAGVAVL 309



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/192 (10%), Positives = 57/192 (29%), Gaps = 14/192 (7%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++ DL   E      T +L             +++   +A      +  +    L   +
Sbjct: 224 VAEGDLL-FELDRTTLTGKLEVAKKALSTAQAELDQATQQA-----FFDTKAKGTLAVIR 277

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               +  ++   LE    +  + +P AG  ++ + +          + ++ +   +    
Sbjct: 278 ARIEERSAEAAQLEDLMARSQVKAPRAGVAVLDDPAEWQGRPVNVGEKVLAVASPND-VE 336

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A + P  +  ++KG   ++              A +  +      Q +         V
Sbjct: 337 VEAWLAPADVIALEKGDPVSLFLNAEPLS---PVSAKLLYVTYEAIPQPDGTLGH---RV 390

Query: 390 ILKITDLAFSDN 401
             ++        
Sbjct: 391 RAELAKGELGPR 402


>gi|313497511|gb|ADR58877.1| Secretion protein HlyD family protein [Pseudomonas putida BIRD-1]
          Length = 289

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 62/200 (31%), Gaps = 44/200 (22%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E I  +      IN                        +    +  ++L +      +  
Sbjct: 113 EAISAELRENAQINAAI--------------------ARGELHEAEAQLQVARINLARSE 152

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P +G I   +  +  NY    + +M +V      YI+A     ++  ++ G T  V 
Sbjct: 153 VRAPRSGHITNLRL-AEGNYVNTGESVMALV-DDSTFYIQAYFEETKLPRIRVGDTVKVW 210

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ---------------EYYEVILKITDL 396
                    +  +  +E I   I+ +++N  +Q               +   V +++  +
Sbjct: 211 L----MGTGEPMQGHVESISRGITDRNSNPDSQLLPEVEPTFNWVRLAQRIPVRIRLDQV 266

Query: 397 AFSDNNIELRNGFPAEVLFT 416
                 + L  G  A V   
Sbjct: 267 ---PEGLTLSAGMTASVQVH 283



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 41/117 (35%), Gaps = 2/117 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV--SIKNLRCH 109
              +VV I    SG +++ +V +  Q+  G  L++ +        D        +  +  
Sbjct: 39  VRADVVVIAPDVSGWVRELKVHDNQQVKAGDLLMSIDRERFQAAFDQASAVTETRAQQLR 98

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +   ++A         +  +  E+ +       G+ H   +++    I+     ++ 
Sbjct: 99  LREREAARRTALGPEAISAELRENAQINAAIARGELHEAEAQLQVARINLARSEVRA 155


>gi|325109699|ref|YP_004270767.1| efflux transporter RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
 gi|324969967|gb|ADY60745.1| efflux transporter, RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
          Length = 439

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 83/251 (33%), Gaps = 15/251 (5%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
             V     +   + RS+   +  L+N     RA L    +  + M+ +  +  + +  + 
Sbjct: 98  QDVQAGAVLGRLQARSLEETQQALQNAVEESRASLQRIGEGDSEMERIETRRQIDELWMQ 157

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                   +  E  E    ++      + + D      A       +   +      D  
Sbjct: 158 LNTVRDSATFPESTETTANKRRFDELESRIRDLDGQSRAQMNASRDQKRNEALAQIRDFE 217

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
            +L  +E   +Q  + +P +G +         N  +  + ++++        + A ++ +
Sbjct: 218 KQLRDIEAQLQQTRLTAPFSGQVTEV-YQQPGNTVRAGEAVLQLQ-DRSSLRVYAHISRE 275

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
               + KG    +R         ++ +  IE IDP  +             +I+++    
Sbjct: 276 LAGQLSKGAAVPLRI------NGEELEGTIESIDPPTTAAPALQ------RIIIRLPSSD 323

Query: 398 FSDNNIELRNG 408
             ++ +EL  G
Sbjct: 324 -QESGVELIPG 333


>gi|209364259|ref|YP_001425360.2| periplasmic component of efflux system [Coxiella burnetii Dugway
           5J108-111]
 gi|207082192|gb|ABS76791.2| periplasmic component of efflux system [Coxiella burnetii Dugway
           5J108-111]
          Length = 332

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 62/414 (14%), Positives = 127/414 (30%), Gaps = 97/414 (23%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++R     L R     + G++ L   S   P+ +     G+ +   + V      SG++K
Sbjct: 1   MERIPGMRLIRPIFWLLFGMLLLSGCSKNQPVLLQGYVEGQFIYLSSSV------SGLLK 54

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V  G  + +   L   +        + ++  ++  +  +  EK  L+ L        
Sbjct: 55  SLLVYRGDSVKEDQTLFILDP-------EPQQSELQEAKAKLTQEKENLENL-------- 99

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                         G+  +  +++      ++   +  + T  R  +L R+   +K  L 
Sbjct: 100 ------------VKGQRQTILNRIIAEREQAIADMIYAQQTLTRFQHLYRVRAISKDELD 147

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +A                +K  V+Q + N  E             + E+K+++     + 
Sbjct: 148 KATADYK----------AKKQIVNQTEANLAE-----------AQLGERKHLILAQQAVV 186

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           D A    A  + E                          +QKT+++P  G I     F  
Sbjct: 187 DAAQANVAKLIWE-------------------------LDQKTVVAPKNGNIFD-TFFKV 220

Query: 309 SNYAQQSQPL-MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             Y    QP+   + P++        +    +  +K G     +       R     A +
Sbjct: 221 GEYVPAGQPVTALLTPNNIKLIF--YIPEPLLSRLKLGTVVEFKCDGCTMQR-----AKV 273

Query: 368 EKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             I P              + +  Y V   I +     N ++   G P +V   
Sbjct: 274 TYISPEGEYTPPIIYSQKSRAKLVYRVECTIPE----KNALKFHAGQPVDVYLH 323


>gi|158299982|ref|XP_319987.4| AGAP009210-PA [Anopheles gambiae str. PEST]
 gi|157013781|gb|EAA43417.4| AGAP009210-PA [Anopheles gambiae str. PEST]
          Length = 1710

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 74/220 (33%), Gaps = 16/220 (7%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++     L + +  +        +  I  +    D E++ +  L  +    E+   +
Sbjct: 720 EAEKVKVQQELSSLQQ-KFEQSRTEHEQLIAEVHALADAERNTIAELRKQLQTSEQENLA 778

Query: 134 REEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +++QL +      +  +++   N   +S+ + L               ++  + + L   
Sbjct: 779 KDKQLEENEVLVSALQNELKELNVSKASLNQELTAIKASFADKDGTLANILQEKTALEKQ 838

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L   +++L              + + Q E  +      LR+ +    +  +      +E 
Sbjct: 839 LEESKQELA-------------SKVKQLEEDLRNREDTLRKELELSASTAQQQLSAKEEE 885

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               +   +E+ + LE  Q+   D   K+   E T   +T
Sbjct: 886 LTRLSQAREELQKQLETAQQQMKDVSDKMKQAEDTIATQT 925



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 81/203 (39%), Gaps = 18/203 (8%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D++ +  +D     +  L   + T++ ALD L + YD L+   E R ++ L    +   T
Sbjct: 1013 DLQRSSTLDSN-SELAKLTDELKTKQRALDELRDSYDTLKIETERRADEKLKAQLEDART 1071

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             SK              +  T +R+       L+ +    R   S+ Q+ L  ++   E+
Sbjct: 1072 ESKKLQE----------LNETAVRAAKEQEESLQKQLQQSRDESSTLQQRLDELRQSMEQ 1121

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             +    DL  Q     +  +EL + + EQ+ + +  +    E   +    L+E  +   +
Sbjct: 1122 GS---QDLTVQIDQKAQRIVELEQELDEQRTLQQKRSAEVAEMVAK----LEENGKSYAE 1174

Query: 269  NQRTFADEMSKLTILEKTREQKT 291
              +   D  +++  L+K + +  
Sbjct: 1175 MLQQLQDSYTQIEALKKAKSESE 1197



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/220 (11%), Positives = 78/220 (35%), Gaps = 19/220 (8%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +     S ++    +  ++  L     +   LE      +++L     K+  + ++ 
Sbjct: 685 QRDLQSLATSGESSAALLAAKQDELSNQAKQLQELEAEKVKVQQELSSLQQKFEQSRTEH 744

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               I+ V+     +   +  +       E ++      L  ++  ++ ++N  ++  VS
Sbjct: 745 EQL-IAEVHALADAERNTIAELRKQLQTSEQENLAKDKQLEENEVLVSALQNELKELNVS 803

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE----- 267
           +  LNQ+   +  S  +    +         + +  +E+  E A+ +K++  DL      
Sbjct: 804 KASLNQELTAIKASFADKDGTLANILQEKTALEKQLEESKQELASKVKQLEEDLRNREDT 863

Query: 268 -------------QNQRTFADEMSKLTILEKTREQKTILS 294
                        Q      +E+++L+   +  +++   +
Sbjct: 864 LRKELELSASTAQQQLSAKEEELTRLSQAREELQKQLETA 903



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 72/215 (33%), Gaps = 7/215 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
             + +   LL  +   T+      +  +  LR  + T+ ++L  L+ K + L       + 
Sbjct: 1256 VVSKNEELLK-QLESTSSAKGATETELIALRQELATKSTSLGELHAKVEELNA-----QL 1309

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            Q    L +   +  +  +   +S+           R    +   +  K   L+ L ++  
Sbjct: 1310 QTKATLEQQVKSLEQSVSAKDASILELSGKVEDLQRQTTSSDAKIVEKEEELKQLQTASA 1369

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
               T +K+L ++    Q  L     +  ++ +E  E     +     + E  D    E  
Sbjct: 1370 SKDTQLKDLQQQLEAMQKTLADSTELSKRTAVEASELQAALEKSRTTVKEQEDR-QKEQQ 1428

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              + E+   L      F + + +    E     +T
Sbjct: 1429 RRIAELETKLAAQATQFDELLDRKKSAETEYSHRT 1463



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 66/194 (34%), Gaps = 16/194 (8%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              +     L      L+    +R+EQ  + L +      +       S    L  K   
Sbjct: 651 KAAQEVESKLTASEAALKAEIAARQEQ--ESLAQKLQRDLQSLATSGESSAALLAAKQDE 708

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-----------LFEKNAVSQNDLNQQ 219
           + +      +LE +   ++  LSS Q+     +            L +    +  +L +Q
Sbjct: 709 LSNQAKQLQELEAEKVKVQQELSSLQQKFEQSRTEHEQLIAEVHALADAERNTIAELRKQ 768

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE---ISRDLEQNQRTFADE 276
            +   +  L   + + E + ++  +     E N+  A+  +E   I         T A+ 
Sbjct: 769 LQTSEQENLAKDKQLEENEVLVSALQNELKELNVSKASLNQELTAIKASFADKDGTLANI 828

Query: 277 MSKLTILEKTREQK 290
           + + T LEK  E+ 
Sbjct: 829 LQEKTALEKQLEES 842


>gi|153947637|ref|YP_001399413.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia
           pseudotuberculosis IP 31758]
 gi|254801260|sp|A7FDT5|AAEA_YERP3 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|152959132|gb|ABS46593.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia
           pseudotuberculosis IP 31758]
          Length = 311

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 82/253 (32%), Gaps = 27/253 (10%)

Query: 204 NLFEKN----AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            L +K      + Q    Q            +    E++      + L  +A  +    +
Sbjct: 67  QLVQKGQILFVIDQPRYQQALAEAEADVAYYQTLAAEKQREFSRRHLLGIQALSQ--EEI 124

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            + S  L+  Q   A  ++   +     E+ TI +P  G +      +   +  +    +
Sbjct: 125 DQASNVLQTVQHQLAKTIAVRNLARLDLERTTIRAPAEGWVTNLNVHA-GEFINRGATAV 183

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +V      YI A +   +++ VK GY A +        R       ++ I   ++   +
Sbjct: 184 ALV-KKDTFYILAYLEETKLEGVKPGYRAEI--TPLGSNR--ILHGTVDSISAGVTNSSS 238

Query: 380 NLQTQEYYEV-----------ILKITDLAFSDNNIELRN-GFPAEVLFTA-KNTTLAQEI 426
           +  ++    +            + +     S++   L   G  A V+ T   +    Q  
Sbjct: 239 SADSKGLATIDNNLEWVRLAQRVPVKIHLDSEDQQYLYPAGTTATVVITGPNDRDPHQ-- 296

Query: 427 IHPITDNWPKIFE 439
             P+T    ++ E
Sbjct: 297 ASPMTKLMHRLRE 309



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 25/219 (11%), Positives = 63/219 (28%), Gaps = 10/219 (4%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCH 109
             +VV I    SG++ +  V++   + +G  L   +       +   +  +     L   
Sbjct: 44  TADVVAIAPDVSGLLTEVPVKDNQLVQKGQILFVIDQPRYQQALAEAEADVAYYQTLAAE 103

Query: 110 IDTEKSALDFL------NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              E S    L        + D      ++ + QL   +   +     +    I +    
Sbjct: 104 KQREFSRRHLLGIQALSQEEIDQASNVLQTVQHQLAKTIAVRNLARLDLERTTIRAPAEG 163

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
               L      ++NR                   + T ++   +    ++       RI+
Sbjct: 164 WVTNLNVHAGEFINRGATAVALVKKDTFYILAYLEETKLEG-VKPGYRAEITPLGSNRIL 222

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + +   +   +    +          + NLE+    + +
Sbjct: 223 HGTVDSISAGVTNSSSSADSKGLATIDNNLEWVRLAQRV 261


>gi|325919522|ref|ZP_08181541.1| RND family efflux transporter, MFP subunit [Xanthomonas gardneri
           ATCC 19865]
 gi|325923817|ref|ZP_08185431.1| RND family efflux transporter, MFP subunit [Xanthomonas gardneri
           ATCC 19865]
 gi|325545711|gb|EGD16951.1| RND family efflux transporter, MFP subunit [Xanthomonas gardneri
           ATCC 19865]
 gi|325549998|gb|EGD20833.1| RND family efflux transporter, MFP subunit [Xanthomonas gardneri
           ATCC 19865]
          Length = 414

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/191 (12%), Positives = 65/191 (34%), Gaps = 24/191 (12%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLIT-----WSILLPIEISVSSSGEI----------- 50
              +   PA  +R   +    +I ++      W    P+    ++               
Sbjct: 14  DRQRPADPAPARRGGWIIAAVVIVILLAATAWWFTRRPVAKVQTAPVVAISAGSSSASVL 73

Query: 51  -----LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
                +    +  + +  +G +++  +E G ++ QG  + T + ++      L    +  
Sbjct: 74  DASGYVVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDAEAQRTLSASQLSA 133

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESR---EEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            R  +D  ++ L   N     L+    ++     Q      +  +  +++ N   +    
Sbjct: 134 ARSQVDNMQAQLAVANADATRLQSLVGAQLVSRSQYEQATAQRDALRAQLQNAQRNVRVA 193

Query: 163 SLKMKLTRMRS 173
           S ++ ++ +RS
Sbjct: 194 SDQLAISAIRS 204



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 80/272 (29%), Gaps = 38/272 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V    +++V   +  K+  +      R++     + L  L +  Q+ L            
Sbjct: 79  VVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDAEAQRTL------------ 126

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFANYLKE-ISRDLEQN 269
           S + L+     V     +L     +   +   +  +L   +  E A   ++ +   L+  
Sbjct: 127 SASQLSAARSQVDNMQAQLAVANADATRLQSLVGAQLVSRSQYEQATAQRDALRAQLQNA 186

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--------LMKI 321
           QR       +L I     +   + +P AG +V  ++                    +  I
Sbjct: 187 QRNVRVASDQLAISAIRSDFNVVRAPFAG-VVTAKAAQPGEIVSPLSAGGGFTRTGIGTI 245

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V   +   I  +V    I  V+           Y + +       +  I P   +     
Sbjct: 246 V-DMESLEIEVEVGESYIGRVQPKMPVEAVLNAYPEWK---IPGEVIAIIPTADRGKAT- 300

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                  V +++   AF   +  +       V
Sbjct: 301 -------VKVRV---AFKVKDPRIVPEMGVRV 322


>gi|291569369|dbj|BAI91641.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 813

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 79/219 (36%), Gaps = 14/219 (6%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             +  ++      K+  ++N +  +   +  L+   + +   +K  E+ + QL       
Sbjct: 402 RKDLEKSQSDFQQKQKELENSQSQLQQTRKDLEKSQSDFQQKQKELENSQSQLQQTQKDL 461

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH---QKDLTMM 202
             + S  F      +  S        + +  ++ D + K   L +  S     QKDL   
Sbjct: 462 EKSQSD-FQQKQKELENSQSQLQQTQKDLEKSQSDFQQKQKELESSQSQLQQTQKDLEKS 520

Query: 203 KNLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           ++ F++       SQ+ L Q ++ + KS  + ++   E +N    + +   +     +++
Sbjct: 521 QSDFQQKQKELENSQSQLQQTQKDLEKSQSDFQQKQKELENSQSQLQQTQKDLEKSQSDF 580

Query: 259 LKEI------SRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++          L+Q Q+      S     +K  E   
Sbjct: 581 QQKQKELENSQSQLQQTQKDLEKSQSDFQQKQKELENSQ 619



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 79/214 (36%), Gaps = 15/214 (7%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +  ++      K+  ++N +  +   +  L+   + +   +K  ES + QL         
Sbjct: 460 DLEKSQSDFQQKQKELENSQSQLQQTQKDLEKSQSDFQQKQKELESSQSQLQQTQKDLEK 519

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + S  F      +  S        + +  ++ D + K   L    S  Q+     K+L +
Sbjct: 520 SQSD-FQQKQKELENSQSQLQQTQKDLEKSQSDFQQKQKELENSQSQLQQ---TQKDLEK 575

Query: 208 KNAV----------SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             +           SQ+ L Q ++ + KS  + ++   E +N    + +   +     ++
Sbjct: 576 SQSDFQQKQKELENSQSQLQQTQKDLEKSQSDFQQKQKELENSQSQLQQTRKDLEKSQSD 635

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           + ++  ++LE +Q       +K+  ++   +   
Sbjct: 636 FQQK-QKELENSQSEGKKLETKVKEVQDQLKNAQ 668



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 74/201 (36%), Gaps = 9/201 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           ++    D     ++     +   +  L+   + +   +K  E+ + QL         + S
Sbjct: 379 QSQYQRDQILAELEQYHTRLQQTRKDLEKSQSDFQQKQKELENSQSQLQQTRKDLEKSQS 438

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             F      +  S        + +  ++ D + K   L    S  Q+     K+L +   
Sbjct: 439 D-FQQKQKELENSQSQLQQTQKDLEKSQSDFQQKQKELENSQSQLQQ---TQKDLEK--- 491

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            SQ+D  Q+++ +  S  +L++   + +       +   E     +  L++  +DLE++Q
Sbjct: 492 -SQSDFQQKQKELESSQSQLQQTQKDLEKSQSDFQQKQKELENSQSQ-LQQTQKDLEKSQ 549

Query: 271 RTFADEMSKLTILEKTREQKT 291
             F  +  +L   +   +Q  
Sbjct: 550 SDFQQKQKELENSQSQLQQTQ 570



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 75/210 (35%), Gaps = 11/210 (5%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L   E  ++       +  ++  +  ++  ++ L     + D +    E    +L   
Sbjct: 344 QILADLE--KSYSQFKQSQTQLEQSQSQLERTQTELQQSQYQRDQILAELEQYHTRLQQT 401

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                 + S  F      +  S        + +  ++ D + K   L    S  Q+    
Sbjct: 402 RKDLEKSQSD-FQQKQKELENSQSQLQQTRKDLEKSQSDFQQKQKELENSQSQLQQ---T 457

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            K+L +    SQ+D  Q+++ +  S  +L++   + +       +   +      + L++
Sbjct: 458 QKDLEK----SQSDFQQKQKELENSQSQLQQTQKDLEKSQSDFQQ-KQKELESSQSQLQQ 512

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +DLE++Q  F  +  +L   +   +Q  
Sbjct: 513 TQKDLEKSQSDFQQKQKELENSQSQLQQTQ 542


>gi|288942218|ref|YP_003444458.1| RND family efflux transporter MFP subunit [Allochromatium vinosum
           DSM 180]
 gi|288897590|gb|ADC63426.1| efflux transporter, RND family, MFP subunit [Allochromatium vinosum
           DSM 180]
          Length = 367

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 62/211 (29%), Gaps = 19/211 (9%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             +   + +V  ++ E    + E +   R     Y+      A         L++ +R  
Sbjct: 80  QRVRAGDPLVEMTSAEEHALLEEARVRTREAERQYERVKSLVAQ-RSASESLLDERKRDL 138

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY-IRA 332
               + LT +E     + I +P  G ++  ++ S     +    +  +         +  
Sbjct: 139 DTARALLTAIESRVADRFIKAPFDG-VLGLRNISPGALVEPGALITTL--DDDRLMKLDF 195

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V    +  ++ G         +       FK ++  +D  I     +        V ++
Sbjct: 196 SVPSIHLASLQPGLGIEATSSAFGAR---VFKGVVRGVDSRIDPVTRS--------VRVR 244

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
                  + +  L+ G    V+         
Sbjct: 245 ---AILPNPDFTLKPGLLMRVVLLLDPREAL 272



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 49/125 (39%), Gaps = 5/125 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + + P+   V + G +  +++V  I S  +  I     ++G ++  G PL+     E   
Sbjct: 40  AHVQPLSERVEALGTLQADESV-AITSQVTETISVVHFDDGQRVRAGDPLVEMTSAEEHA 98

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           L++  +V  +      +  KS    L  +    E   + R+  L        +  S+V +
Sbjct: 99  LLEEARVRTREAERQYERVKS----LVAQRSASESLLDERKRDLDTARALLTAIESRVAD 154

Query: 155 YGISS 159
             I +
Sbjct: 155 RFIKA 159


>gi|229520919|ref|ZP_04410341.1| membrane-fusion protein [Vibrio cholerae TM 11079-80]
 gi|229342152|gb|EEO07148.1| membrane-fusion protein [Vibrio cholerae TM 11079-80]
          Length = 366

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 20/183 (10%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLE--QNQRTFADEMSKLTILEKTREQKTI 292
            + +     +     E N   A   K +  ++          D  S L+ +++  +   +
Sbjct: 120 AQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQV 179

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
             P  G +         ++     P+  I+       I A V+ + IQHV+    A +RF
Sbjct: 180 RVPFDGVVETLPI-EKGDFVGIGDPVASII-DLHKLVIEADVSERHIQHVQLEQAARIRF 237

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                I   + +  +  I  + S   N       + + +++ +   +     +  G  AE
Sbjct: 238 -----IDGTQTQGKVRYISRLSSLATNT------FAIEVEVDNPQQA-----IPAGVSAE 281

Query: 413 VLF 415
           V  
Sbjct: 282 VEL 284



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 61/200 (30%), Gaps = 14/200 (7%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +   G    +     I +  +G I + ++  G  + +   +   +  +    ++  K
Sbjct: 68  DKVIELYGRTAPDRQAK-IGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAK 126

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +K  +     E +A   L NK    E AF +    L D      +    + N  +   
Sbjct: 127 AQLKVRQ----QEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRVP 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   L   +  ++   D       L  L+               +  +    L Q  
Sbjct: 183 FDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEAD---------VSERHIQHVQLEQAA 233

Query: 221 RIVYKSTLELRENIHEQKNM 240
           RI +    + +  +     +
Sbjct: 234 RIRFIDGTQTQGKVRYISRL 253


>gi|254522728|ref|ZP_05134783.1| secretion protein HlyD family protein [Stenotrophomonas sp. SKA14]
 gi|219720319|gb|EED38844.1| secretion protein HlyD family protein [Stenotrophomonas sp. SKA14]
          Length = 206

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 5/166 (3%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQRT 272
           DL      +  S  +LRE       +    +E         A    L  +  D++     
Sbjct: 5   DLALANDRLKGSQAQLRELERNATRLSTGASEGVSSNQQADAAKQQLAGVRADVDVAGAQ 64

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                 KL   +   +Q ++ +P AGT+V  Q      + Q  +P + ++P  +   +RA
Sbjct: 65  VDMAQHKLEHAKLKLQQMSLSAPEAGTVVG-QVPGLGAFVQAGKPAISLLPA-RPLQVRA 122

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFK-AIIEKIDPIISQQ 377
           +++      V+ G  ATV               A + +I P+ +Q 
Sbjct: 123 ELSAAYADAVQVGMKATVVPDSDGAENTSTLPSARVVRISPVFAQA 168


>gi|242765533|ref|XP_002340993.1| ftsj, putative [Talaromyces stipitatus ATCC 10500]
 gi|218724189|gb|EED23606.1| ftsj, putative [Talaromyces stipitatus ATCC 10500]
          Length = 814

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 78/223 (34%), Gaps = 6/223 (2%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
                LL  +  ++   ID        L+  +   +  L  L        +A +  +  L
Sbjct: 55  EADHELLRMKCEQSEYDIDQLLQVETALKQQLLRAQEDLANLQLSTLADTRAIQDLKSDL 114

Query: 139 LDFLGKYHSTCSKVFNY-GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                K         +   ++     +K +  R++    +  +L  + S L   L+S + 
Sbjct: 115 TSMKRKVSDYEKMSADKLNLTKEIAQMKQEFERLQHQNKSHQNLIAEKSALERQLNSLEI 174

Query: 198 DLTMMKNLFEKN--AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE---LYDEAN 252
            L   +  FE+N     +   ++ ++ + +   EL++   E+  + + INE    +++  
Sbjct: 175 QLKEERRAFERNRSIEDKKQNSEAQQQLKRLQAELQKETDERSRLEQEINERTTAWEQQK 234

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
                 L+++ + L   +    +   +        E + I  P
Sbjct: 235 KSLEERLEKLRKQLRSTKEKLKEYQEQQNDSLLPLEPQQIDRP 277


>gi|83616161|gb|ABC25605.1| anonymous antigen-2 [Babesia bovis]
          Length = 718

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/203 (7%), Positives = 56/203 (27%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E       ++   +  R   + E+   +    +     +A   R+E   +   +  +   
Sbjct: 204 EAEAERKRQEAEAERKRQEAEAERKRQEAEAERKRQEAEAERKRQEAEAERKRQEEAEAE 263

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +       +  +  +      +       + + +           + +    +    +  
Sbjct: 264 RKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAE 323

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             + +  + ER   +     R+   E +   +   E   E   +     +   ++  + +
Sbjct: 324 RKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAE 383

Query: 271 RTFADEMSKLTILEKTREQKTIL 293
           R   +E       ++  E +   
Sbjct: 384 RKRQEEAEAERKRQEEAEAERKR 406



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/207 (10%), Positives = 55/207 (26%), Gaps = 3/207 (1%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E          ++   +  R   + E+   +    +     +A   R+E   +   +   
Sbjct: 192 EQEALEAERKRQEAEAERKRQEAEAERKRQEAEAERKRQEAEAERKRQEAEAERKRQEAE 251

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              K      +   R  + +  R R           + +          +     +   E
Sbjct: 252 AERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAE 311

Query: 208 KNAVSQNDLNQQERIVYKSTLELREN---IHEQKNMLRHINELYDEANLEFANYLKEISR 264
                Q +   + +   ++  E +       E+K       E   +   E     +E + 
Sbjct: 312 AERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAE 371

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKT 291
              + Q     E  +    E  R+++ 
Sbjct: 372 AERKRQEEAEAERKRQEEAEAERKRQE 398



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/203 (10%), Positives = 62/203 (30%), Gaps = 1/203 (0%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           I+  +  +   V  K  +  ++ E+   +    +     +A   R+E   +   +     
Sbjct: 176 IQYKNCSEKNWVEFKAEQEALEAERKRQEAEAERKRQEAEAERKRQEAEAERKRQEAEAE 235

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            K          +  + +  R       R   E   +  +    +  +     +   E+ 
Sbjct: 236 RKRQEAEAERKRQEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERK 295

Query: 210 AVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
              + +  ++ +   ++  + +E    E+K       E   +   E     +E +    +
Sbjct: 296 RQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERK 355

Query: 269 NQRTFADEMSKLTILEKTREQKT 291
            Q     E  +    E  R+++ 
Sbjct: 356 RQEEAEAERKRQEEAEAERKRQE 378



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/198 (9%), Positives = 59/198 (29%), Gaps = 2/198 (1%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY-HSTCSKVFN 154
            + + +  +  R   + E+   +    +     +A   R+E   +   +   +   +   
Sbjct: 191 AEQEALEAERKRQEAEAERKRQEAEAERKRQEAEAERKRQEAEAERKRQEAEAERKRQEA 250

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                     + +  R       R   E   +  +    +  +     +   E+    + 
Sbjct: 251 EAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEA 310

Query: 215 DLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +  ++ +   ++  + +E    E+K       E   +   E     +E +    + Q   
Sbjct: 311 EAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEAEAERKRQEEA 370

Query: 274 ADEMSKLTILEKTREQKT 291
             E  +    E  R+++ 
Sbjct: 371 EAERKRQEEAEAERKRQE 388


>gi|38505833|ref|NP_942451.1| hypothetical protein slr6008 [Synechocystis sp. PCC 6803]
 gi|38505892|ref|NP_942510.1| hypothetical protein slr6067 [Synechocystis sp. PCC 6803]
 gi|38423857|dbj|BAD02065.1| slr6008 [Synechocystis sp. PCC 6803]
 gi|38423916|dbj|BAD02124.1| slr6067 [Synechocystis sp. PCC 6803]
          Length = 343

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 99/322 (30%), Gaps = 35/322 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
            + + L  I+G +             + S++  +   + +    +   G   + +V  G 
Sbjct: 3   WRALLLAVILGTVVFGGLHAQTNTTNTPSNNSSLTTPNRLKI--NLTLGDPTELKVREGD 60

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIK------NLRCHIDTEKSALDFLNNKYDVLEKA 130
            + +G  L   E   +    D ++  +        L   +    +  +     Y V E A
Sbjct: 61  TVNRGQVLSDKEAERSRLERDQRERLLAIANVEGQLVPTLQPAPALRELPPVSYTVEETA 120

Query: 131 FESREEQLLDFLGKYHST-CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN------ 183
            +  E +L        +   +  F    + V RSL       R+  L +  L+       
Sbjct: 121 IQLAEIKLAQAQRNLATAIEADPFISAKAKVERSLADVEAAHRAFELQQRKLDAVNGLKG 180

Query: 184 -----------KSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELR 231
                      K   +R  L   + +    +   F+  A  + +L   +  V  +  EL 
Sbjct: 181 LPPEMLTHETEKLRQVRTALEGKEAEYKFFQAEYFQVEADRRKELTDLQSKVSIARGELE 240

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKE-------ISRDLEQNQRTFADEMSKLTILE 284
           +     +    +         +  +   +E       ++      +   A    +L+ +E
Sbjct: 241 QAQSRLRAAKENRELAEYNHRITISRRAEEENQVAINVANQKLDREFKLAQLREQLSAVE 300

Query: 285 KTREQ-KTILSPIAGTIVYNQS 305
           +       I SP +GTI   + 
Sbjct: 301 EKLNGIVQIKSPYSGTIRRIKF 322


>gi|300697767|ref|YP_003748428.1| transmembrane multidrug efflux system, component of acridine efflux
           pump [Ralstonia solanacearum CFBP2957]
 gi|299074491|emb|CBJ54042.1| transmembrane multidrug efflux system, putative component of
           acridine efflux pump [Ralstonia solanacearum CFBP2957]
          Length = 443

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 3/119 (2%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            VE++    G I     ++GS + +G PL T +       +   + ++   +  +    S
Sbjct: 70  RVEVRPLVGGTIMAVHFKDGSIVKKGDPLFTIDPRPYAAEVARTQAALTAAKSRVAYTAS 129

Query: 116 ALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            LD    L     +  + FE +E    +         + +    ++  Y  +   +   
Sbjct: 130 ELDRAQKLVADNAIARREFEEKENAAREAQANLQGAAAALDAARLNLEYTRIVAPVAGR 188



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 29/101 (28%), Gaps = 7/101 (6%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------YLKEISRDLEQNQRTFA 274
           R         +  +   K+ + +     D A    A+        +E      + Q    
Sbjct: 104 RPYAAEVARTQAALTAAKSRVAYTASELDRAQKLVADNAIARREFEEKENAAREAQANLQ 163

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              + L       E   I++P+AG +   +  +  N     
Sbjct: 164 GAAAALDAARLNLEYTRIVAPVAGRVSRAEI-TVGNVVATG 203


>gi|299770324|ref|YP_003732350.1| membrane-fusion protein [Acinetobacter sp. DR1]
 gi|298700412|gb|ADI90977.1| membrane-fusion protein [Acinetobacter sp. DR1]
          Length = 339

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 93/306 (30%), Gaps = 42/306 (13%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I+K  V+ G ++  G  L T                      HI  +++       
Sbjct: 52  QSGRIEKLLVQEGDKVKAGQVLATLNTNA----------------LHIQAKQAQAQLKAQ 95

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  ++++   +R E++     +  S  +++     +     + +  T  R+I    LD  
Sbjct: 96  QEAIVKQDVGARPEEITQAKAQLASAQAELDKTNKNLQRLQILVSSTDGRAISQQELDYA 155

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNML 241
             +   +    +  ++      L  K A  +  +  + +  V K+ L+L      Q  + 
Sbjct: 156 KSN---KDSAEAAVRERQANLELIIKGARQEDREATKAQYEVTKANLDLINYNLTQAELK 212

Query: 242 RHINELYDEANLEFANYLKEISR---------DLEQNQRTFADEMS-KLTILEKTREQKT 291
             +N +      E  +                   +      D  S K+    +      
Sbjct: 213 SPVNAVVRARLQEVGDMTTAQKAVYTLALTDPKWIRVYVNEQDLSSIKMGGTAQVIRDSD 272

Query: 292 ILSPIAGTIVYNQS---FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ-IQHVKKGYT 347
              PI G I Y  S   F+      Q++ +              +V        +  G  
Sbjct: 273 SNQPINGKIGYISSVAEFTPKTV--QTEEI------RTTLVYEVRVYVNDPSDQLNMGQP 324

Query: 348 ATVRFP 353
            +V+ P
Sbjct: 325 VSVKVP 330


>gi|163736233|ref|ZP_02143652.1| hypothetical protein RGBS107_13916 [Phaeobacter gallaeciensis
           BS107]
 gi|161390103|gb|EDQ14453.1| hypothetical protein RGBS107_13916 [Phaeobacter gallaeciensis
           BS107]
          Length = 378

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 79/219 (36%), Gaps = 21/219 (9%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           K+A+    L Q      +  ++  E  +++   L   + + +    + A  L      L 
Sbjct: 175 KSALIDQSLAQLRLETKRIEVDQSERDYDRLTSLLAKDAVSERVTQDAATALSLAKTALR 234

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY------AQQSQPLMKI 321
           Q ++       K+ I ++  ++ TI +P++GTI    +   ++        + +  LM I
Sbjct: 235 QAEQDIHLANLKVEIAQEHVDELTIRAPVSGTITQLNARIGNSVLARVDTIRDTDYLMVI 294

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
              +   Y+ A+V    +  ++ G T       + D     F+  +  I P++S +   +
Sbjct: 295 T-DTASMYLDAEVAETNVSRLRVGLTGEAVLDGFPDQ---PFEVRVVGISPVVSAERGTI 350

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                         L        +R    A +  T  +T
Sbjct: 351 SL-----------RLELDGPPDGIRPNMAARIRITLSDT 378



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 51/142 (35%), Gaps = 3/142 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++ SG +L +D          G I    V  G  + +G PL    D      +    +  
Sbjct: 123 ITGSGYVLVQDYASVFAKYE-GTITDLLVALGDPVTRGQPLAAVSDPGAQYALKSALIDQ 181

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  ++T++  +D     YD L       ++ + + + +  +T   +    +    + 
Sbjct: 182 SLAQLRLETKRIEVDQSERDYDRLTSLLA--KDAVSERVTQDAATALSLAKTALRQAEQD 239

Query: 164 LKMKLTRMRSIYLNRLDLENKS 185
           + +   ++     +  +L  ++
Sbjct: 240 IHLANLKVEIAQEHVDELTIRA 261


>gi|134095760|ref|YP_001100835.1| putative ABC transport system, membrane protein [Herminiimonas
           arsenicoxydans]
 gi|133739663|emb|CAL62714.1| putative secretion protein HlyD [Herminiimonas arsenicoxydans]
          Length = 355

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 59/170 (34%), Gaps = 7/170 (4%)

Query: 20  MTLLSIIGIIGLITWSIL---LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           + ++ I  +     W  L    P    +S +G I   +  V++ +   G +    V+ G 
Sbjct: 10  IAIVLIAVVAAAYAWFTLRDTGPGAGFISGNGRIEATE--VDVSTKLGGRVLDILVKEGD 67

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G PL   +    T ++D  +   +     I + ++ +    +     +     R+ 
Sbjct: 68  FVSAGQPLAHMQIDTLTAMVDEARARQQQAVAAIASAEALVAMRQSDKQAAQALVVQRQS 127

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +L     +   T S+      +S  + L     R RS+    +    +  
Sbjct: 128 ELDAAQRRL--TRSQTLAQEGASSQQELDDDRARERSVQAALVAASAQVE 175


>gi|110643838|ref|YP_671568.1| hypothetical protein ECP_3695 [Escherichia coli 536]
 gi|191170444|ref|ZP_03031997.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli F11]
 gi|300977022|ref|ZP_07173730.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 200-1]
 gi|110345430|gb|ABG71667.1| hypothetical protein YibH [Escherichia coli 536]
 gi|190909252|gb|EDV68838.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli F11]
 gi|300308412|gb|EFJ62932.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 200-1]
 gi|324014251|gb|EGB83470.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 60-1]
          Length = 378

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPDADIDALPDGIYAQV 347


>gi|327393534|dbj|BAK10956.1| multidrug resistance protein MexA precursor MexA [Pantoea ananatis
           AJ13355]
          Length = 382

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 63/188 (33%), Gaps = 11/188 (5%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +   +G + ++           GII+K     G ++  G  L   +        D     
Sbjct: 51  AGRVTGSMTSDVRPQV-----DGIIQKRLFTEGDEVKAGQVLYQIDPASYQASYDQAVAQ 105

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +KN +  + + K   +    +Y  L K      +   D    Y    + V  Y  +    
Sbjct: 106 LKNAQALVKSSKLKAE----RYAALVKDNGVSRQDADDAQATYQQNVASVDQYRAAVESA 161

Query: 163 SLKMKLTRMRSIYLNRLDLENKS--SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + +  T++++    R+ + + +  +L+ A  ++    +  +  ++     S   L +  
Sbjct: 162 RINLNYTQIKAPISGRIGISSVTPGALVTASQTTALATIRALDPIYVDLTQSSVQLLKLR 221

Query: 221 RIVYKSTL 228
           R       
Sbjct: 222 RQQASLQQ 229



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 65/246 (26%), Gaps = 35/246 (14%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q D  + K LF +    +      +           + + + KN    +     +A    
Sbjct: 65  QVDGIIQKRLFTEGDEVKAGQVLYQIDPASYQASYDQAVAQLKNAQALVKSSKLKAERYA 124

Query: 256 A---------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           A             +     +QN  +     + +           I +PI+G I    S 
Sbjct: 125 ALVKDNGVSRQDADDAQATYQQNVASVDQYRAAVESARINLNYTQIKAPISGRI-GISSV 183

Query: 307 SSSNYAQQSQP--LMKI---------VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           +       SQ   L  I         +  S +  ++ +     +Q  K G   TV+    
Sbjct: 184 TPGALVTASQTTALATIRALDPIYVDLTQSSVQLLKLRRQQASLQQNKDGVPVTVKL--- 240

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            D         +E  +  + +    +                F +   EL  G       
Sbjct: 241 EDGTTYDHPGKLELTEVSVDEATGTVTL-----------RAIFPNPQHELLPGMYVRASV 289

Query: 416 TAKNTT 421
           T    +
Sbjct: 290 TNGVKS 295


>gi|296218641|ref|XP_002755553.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase
            beta-3 [Callithrix jacchus]
          Length = 1310

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/225 (11%), Positives = 86/225 (38%), Gaps = 15/225 (6%)

Query: 84   LLTFEDIETTDLIDLKK------VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
            L+     +  +L +L+K      V++         +  A      +   L +A +   ++
Sbjct: 1040 LVKLRSRQERELRELRKKHQRKVVTLTRRLLDGLAQAQAESRCRPRPGALGRAADEDSKE 1099

Query: 138  LLDFLGKYHSTCSKV------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              D + +Y    ++            +      +++  +     L  + L+  ++  + L
Sbjct: 1100 GEDEVKRYQEFQNRQVQSLLELREAQADTEAQRRLEHLKQAQQRLREVVLDANTTQFKRL 1159

Query: 192  LSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +++++   ++ + ++   N++S+     + +   + T   R +I E  N +R + E  
Sbjct: 1160 KETNEREKKELQKILDRKRHNSISEAKTRDKHKKEVELTEINRRHITESVNSIRRLEEAQ 1219

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +       +++ + L + +     ++++    ++ R  + I 
Sbjct: 1220 KQRHDRLEAGQQQVLQQLAEEEPKLLAQLAQECQEQRARLPQEIR 1264


>gi|254447574|ref|ZP_05061040.1| secretion protein HlyD [gamma proteobacterium HTCC5015]
 gi|198262917|gb|EDY87196.1| secretion protein HlyD [gamma proteobacterium HTCC5015]
          Length = 389

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 60/191 (31%), Gaps = 24/191 (12%)

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + E   E N +  +        LEQ Q      ++      +   QKT+ +P +G  + 
Sbjct: 113 KLAEQELERNRKLYDKGSISKSTLEQRQSQRDQAVATAAAQRERVAQKTVRAPFSGE-LG 171

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +      Y     P++ +       Y+   +  + +  + KG  A      +   R   
Sbjct: 172 LRQVDLGEYLTPGAPVVTLQ-QLNPIYVDFSLPEQHLSKMAKGLKAKATLSAWPGER--- 227

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN--- 419
           F   I  ++P +     N   Q             F +++++LR G  + V         
Sbjct: 228 FDGEITALEPGVDASTRNFNLQ-----------ATFENDDLKLRPGMFSRVDIQMPQSED 276

Query: 420 -----TTLAQE 425
                 T  Q 
Sbjct: 277 VVVIPRTAIQY 287



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 7/138 (5%)

Query: 33  TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           TW+    I I    +   +   N VE+ S  +G +++ + ++G ++  G  LL  +D   
Sbjct: 49  TWA----ISIGAVGT---VTAINGVEVTSQVAGEVERIEFDSGDKVKAGDVLLRLDDRAD 101

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +     + K     ++  +   D  +     LE+    R++ +     +      K 
Sbjct: 102 RAQLQALDAAAKLAEQELERNRKLYDKGSISKSTLEQRQSQRDQAVATAAAQRERVAQKT 161

Query: 153 FNYGISSVYRSLKMKLTR 170
                S      ++ L  
Sbjct: 162 VRAPFSGELGLRQVDLGE 179


>gi|78066436|ref|YP_369205.1| HlyD family secretion protein [Burkholderia sp. 383]
 gi|77967181|gb|ABB08561.1| Secretion protein HlyD family [Burkholderia sp. 383]
          Length = 343

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 78/260 (30%), Gaps = 22/260 (8%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            D + + +L R+ ++  Q D    + L E+   ++                  E   E  
Sbjct: 90  RDFDVRVALQRSRVAQAQSDAARARALVEQAVATRISAQADADKAELDYARANELTRETP 149

Query: 239 NMLRHIN-ELYDEANLEFANYLKEISRDLEQNQRTFADEM-------SKLTILEKTREQK 290
             L     +  D A       +      L   +              ++L      RE  
Sbjct: 150 RGLSKQEYDAADAARKSARARIVAADAQLRSTRAAAQAADAVSGQNDAELRDALLQREYT 209

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           T+++P  G +   ++  +  +    Q L+ IV       + A     Q++HV+ G    +
Sbjct: 210 TVIAPSDGYV-GKKTVETGEHVAPGQALLTIV-EPHPWVV-ANFRETQLRHVRVGEPVRL 266

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNI--- 403
            F    D+   +F   I+   P    Q      +  T  + +V  ++      D      
Sbjct: 267 HFDALPDV---EFVGHIDSQSPATGSQFSLLPPDNATGNFTKVTQRVPVKILLDGRAAIE 323

Query: 404 -ELRNGFPAEVLFTAKNTTL 422
             +  G    V       + 
Sbjct: 324 PRIHPGLSVVVTLQRGRHSP 343



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 66/194 (34%), Gaps = 7/194 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           ++     P   +R+ ++ I     L+   ++   E+   S+ +     ++  I    SG 
Sbjct: 7   QDTPSEPPERGRRLPIVLIAMFAILLVTVLIYEFEVRDLSTDDAYVTGHLHVISPRVSGT 66

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-----NLRCHIDTEKSALDFLN 121
           +++  V +   +  G PL   +  +    + L++  +        R     E++    ++
Sbjct: 67  VERVLVNDNQFVHAGDPLTLLDPRDFDVRVALQRSRVAQAQSDAARARALVEQAVATRIS 126

Query: 122 NKYDVLEKAFE-SREEQLLDFLGKYHSTCS-KVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            + D  +   + +R  +L     +  S       +    S    +     ++RS      
Sbjct: 127 AQADADKAELDYARANELTRETPRGLSKQEYDAADAARKSARARIVAADAQLRSTRAAAQ 186

Query: 180 DLENKSSLLRALLS 193
             +  S    A L 
Sbjct: 187 AADAVSGQNDAELR 200


>gi|54296257|ref|YP_122626.1| hypothetical protein lpp0284 [Legionella pneumophila str. Paris]
 gi|53750042|emb|CAH11432.1| hypothetical protein lpp0284 [Legionella pneumophila str. Paris]
          Length = 328

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 61/181 (33%), Gaps = 19/181 (10%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH---INELYDEANLEFANYLK 260
            L  +  V +  +  +     ++    + N+  QK +          Y+ A +E+A Y  
Sbjct: 94  ELLSRLEVEKKAILLRIEAAEQAIAAGKANVDRQKKLYEQGINSRRQYELAQIEYAKYQN 153

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E+       Q         + I  +  +   I + +AG I    +   S        L +
Sbjct: 154 EL------AQANIDKVNVDVRIARQKTQ--IIKAHVAGIIFRRLTGQESVVVNAGDVLAQ 205

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE--------KKFKAIIEKIDP 372
           I+P ++   +   V    I  V+    A ++F  +  I+           F   +  IDP
Sbjct: 206 ILPETESRAVELWVDGNDIPFVRLNQKARLQFEGWPAIQFRGWPEIAVGTFGGTVSFIDP 265

Query: 373 I 373
            
Sbjct: 266 T 266



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 60/160 (37%), Gaps = 13/160 (8%)

Query: 28  IIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
            +    W            +G+++     +    + SP SG IKK+ V+ G ++  G P+
Sbjct: 32  FLSFTPWQQFA------LGNGKVIAFSPTERQHTVNSPISGRIKKWYVDEGMRVKPGDPI 85

Query: 85  LTF---EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           +     +    + L   KK  +  +        +    ++ +  + E+   SR +  L  
Sbjct: 86  VDITDNDPELLSRLEVEKKAILLRIEAAEQAIAAGKANVDRQKKLYEQGINSRRQYELAQ 145

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           + +Y    +++    I  V   +++   + + I  +   +
Sbjct: 146 I-EYAKYQNELAQANIDKVNVDVRIARQKTQIIKAHVAGI 184


>gi|85712772|ref|ZP_01043816.1| Multidrug resistance efflux pump, HlyD family protein [Idiomarina
           baltica OS145]
 gi|85693412|gb|EAQ31366.1| Multidrug resistance efflux pump, HlyD family protein [Idiomarina
           baltica OS145]
          Length = 353

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 68/192 (35%), Gaps = 10/192 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A   +  L+  I +     W+     ++++  + + +    V ++    +G +++  V+N
Sbjct: 8   AKWVKRALIGFIALFAYFLWA-----DLALPLTPQAMVTRVVTQVAPQVNGTVEQVLVDN 62

Query: 75  GSQILQGTPLLTFEDIETT-----DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
              +  G PL T +            + L++    N +       +     + +    E+
Sbjct: 63  NQYVDPGDPLFTLDPRPFRLQLQQAELALQQAQQSNRQLDAQIRAAQAKLKSAQATADEQ 122

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           + E++  + L   G                   ++    +++ S+ + R D +N  +LL 
Sbjct: 123 SREAQRIKDLVQEGSTSEQAFDQAQSAALQAQANVDAVKSQLESLKVQRGDSDNAYNLLI 182

Query: 190 ALLSSHQKDLTM 201
               +   +  +
Sbjct: 183 QQAKNAVDNAEL 194



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 78/237 (32%), Gaps = 24/237 (10%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q +D      +   + F   +     +L+      R +       + K    +A     
Sbjct: 63  NQYVDPGDPLFTLDPRPFRLQLQQAELALQQAQQSNRQLDAQIRAAQAKLKSAQATADEQ 122

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            ++   +K+L ++ + S+   +Q +    ++   +     + +++     +  +  NL  
Sbjct: 123 SREAQRIKDLVQEGSTSEQAFDQAQSAALQAQANVDAVKSQLESLKVQRGDSDNAYNLLI 182

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                 +                     E      T+ +  AG +   +  S   YA+Q 
Sbjct: 183 QQAKNAVDN------------------AELNLSYTTVRAQHAGRVSNLKL-SEGVYARQG 223

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            PL+ +V         A    K ++HVKKG  A + F           +A I+ +D 
Sbjct: 224 NPLLALVSPHADIV--ADFREKNLRHVKKGQRALIVFDAEPGTVY---EATIDSVDA 275


>gi|332981121|ref|YP_004462562.1| RND family efflux transporter MFP subunit [Mahella australiensis
           50-1 BON]
 gi|332698799|gb|AEE95740.1| efflux transporter, RND family, MFP subunit [Mahella australiensis
           50-1 BON]
          Length = 418

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/308 (11%), Positives = 85/308 (27%), Gaps = 75/308 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V +G ++ +G  L   +  +    I+L +++++N +  ++     L      
Sbjct: 83  GGRLDTIAVRSGDKVKKGQILAQLDIGDLGTQIELARINLRNAQIELNKANDNLKAA--- 139

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                              +   S   +L + ++      +LE 
Sbjct: 140 ----------------------------------KAAQNSAPAQLNQAKA------NLEA 159

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               + A  ++       +  L +    ++  L   E+ V  +   + +      N   +
Sbjct: 160 AKKTMAAAETAANAQDAPISALVDV-ITAREALTAAEQAVNNAQAAVNQASDNVNNAQYN 218

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           + +   +                            +L  L        + SPI G +V+ 
Sbjct: 219 VEQRQIDLKAAQI----------------------RLDALLGQMSNSQLKSPIDGIVVFI 256

Query: 304 QSF-SSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                  +  Q  Q L+++  P+       A +       +K      +        R K
Sbjct: 257 DMNIKKGDVVQPFQTLVQVADPNDLQLSYDASLL-SDPMLIKPDMKVQITI------RNK 309

Query: 362 KFKAIIEK 369
           K    +  
Sbjct: 310 KLTGKVTS 317


>gi|319646186|ref|ZP_08000416.1| YknX protein [Bacillus sp. BT1B_CT2]
 gi|317391936|gb|EFV72733.1| YknX protein [Bacillus sp. BT1B_CT2]
          Length = 378

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 13/171 (7%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I   V   G +   +   E   P  G I   +V+ G ++ +G  L T+ + E     + 
Sbjct: 45  EISSEVMVPGTLQFANEQYEYFEPEKGEIADIKVKEGDKVKKGDVLFTYTNEEIRLEKEQ 104

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             +SI++    ++  K  +  L +K D L+    +                 +  +   S
Sbjct: 105 NALSIQSKDLQLEQVKRKISSLKSKEDELKAELGA-------------EKAKRQIDEERS 151

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +    K     ++   L +  LE KS+ L+         +T+ K    K 
Sbjct: 152 QLEMEEKSLQLELKQADLQKETLEKKSAALQVKSGIDGTVITVDKQAAAKQ 202


>gi|307129052|ref|YP_003881068.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Dickeya dadantii
           3937]
 gi|306526581|gb|ADM96511.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Dickeya dadantii
           3937]
          Length = 315

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 65/237 (27%), Gaps = 12/237 (5%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q    Q            +    E+K        L  +A       +++    L+  
Sbjct: 82  VIDQPRYQQALEQAQADVAYYQALADEKKRESARRQRLGVQAMSR--EEIEQSGNALQTT 139

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               A   ++L + +    +  + +P  G I      +   Y  +    + +V       
Sbjct: 140 LHQLAKAQAELELAKLDLARTVVRAPADGWITNLHVHA-GEYITRGATAVALVKKDSFYL 198

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN------NLQT 383
           + A +   ++  V+ GY   +       I      +I   +    S  D       +   
Sbjct: 199 L-AYMEETKLAGVRPGYRVEITPLGSNQILFGAVDSIAAGVTNSSSSADTKGLATVDSNL 257

Query: 384 QEYYEVILKITDLAFSDNNIELRN-GFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +           +       +L   G  A V       T   + + P+     ++ E
Sbjct: 258 EWVRLAQRVPVKIRLEQQWGDLYPAGTTATV-VVTGEHTRNTKPMSPLLQLLHRLRE 313



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 34/108 (31%), Gaps = 1/108 (0%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
             +VV I    SG++    V++   + QG  L   +       ++  +  +   +  +  
Sbjct: 49  SADVVAIAPDVSGLLTDVNVQDNQPVKQGDVLFVIDQPRYQQALEQAQADVAYYQA-LAD 107

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           EK        +  V   + E  E+         H          ++ +
Sbjct: 108 EKKRESARRQRLGVQAMSREEIEQSGNALQTTLHQLAKAQAELELAKL 155


>gi|124022579|ref|YP_001016886.1| membrane fusion protein [Prochlorococcus marinus str. MIT 9303]
 gi|123962865|gb|ABM77621.1| possible membrane fusion protein [Prochlorococcus marinus str. MIT
           9303]
          Length = 392

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 68/214 (31%), Gaps = 26/214 (12%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L++ + +  K   E +    + +       +    A     +   +  R    ++   A
Sbjct: 128 RLDEAKALERKEQAEYQTRKADHERRDNLYQQGAISA-----DDASKYRRLYLTSRANLA 182

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL------- 327
               ++        +  I +P +G I   +      +   +         S         
Sbjct: 183 AAQERVQQRITEGRELLIRAPFSGVITA-RYAEPGAFVTPTTAASATAGASSSSLVELSE 241

Query: 328 -TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + AKV    I  ++ G  A+VR   + + R   F A + +I P  ++ +N       
Sbjct: 242 GMEVNAKVPESDIGRIRIGQNASVRVDAFPEQR---FMARVSEIAPRAAKTEN------- 291

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             VI     L     + +L  G  A+V F    T
Sbjct: 292 --VISFAVKLNLIKRSPQLLIGMSADVDFQTGKT 323



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 55/134 (41%), Gaps = 5/134 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   VS++GE+  + +V  +    +G++++  V+ G  + +G  L   +  +  D +D  
Sbjct: 74  LPGIVSANGELQAKRSV-NVSPKKAGLLEELYVDQGDTVKKGEVLARMDSGDYNDRLDEA 132

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K   +  +    T K+  +  +N Y     + +   +    +   Y ++ + +       
Sbjct: 133 KALERKEQAEYQTRKADHERRDNLYQQGAISADDASK----YRRLYLTSRANLAAAQERV 188

Query: 160 VYRSLKMKLTRMRS 173
             R  + +   +R+
Sbjct: 189 QQRITEGRELLIRA 202


>gi|52080035|ref|YP_078826.1| putative secretion protein, protein transporter [Bacillus
           licheniformis ATCC 14580]
 gi|52785410|ref|YP_091239.1| YknX [Bacillus licheniformis ATCC 14580]
 gi|52003246|gb|AAU23188.1| putative secretion protein, protein transporter [Bacillus
           licheniformis ATCC 14580]
 gi|52347912|gb|AAU40546.1| YknX [Bacillus licheniformis ATCC 14580]
          Length = 378

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 13/171 (7%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I   V   G +   +   E   P  G I   +V+ G ++ +G  L T+ + E     + 
Sbjct: 45  EISSEVMVPGTLQFANEQYEYFEPEKGEIADIKVKEGDKVKKGDVLFTYTNEEIRLEKEQ 104

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             +SI++    ++  K  +  L +K D L+    +                 +  +   S
Sbjct: 105 NALSIQSKDLQLEQVKRKISSLKSKEDELKAELGA-------------EKAKRQIDEERS 151

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +    K     ++   L +  LE KS+ L+         +T+ K    K 
Sbjct: 152 QLEMEEKSLQLELKQADLQKETLEKKSAALQVKSGIDGTVITVDKQAAAKQ 202


>gi|21244713|ref|NP_644295.1| acriflavin resistance protein [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21110404|gb|AAM38831.1| acriflavin resistance protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 375

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 50/126 (39%), Gaps = 3/126 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +    +  + +  +G +++  +E G ++ QG  + T + ++      L    +   R  +
Sbjct: 40  VVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDADAQRSLSASQLSAARSQV 99

Query: 111 DTEKSALDFLNNKYDVLEKAFESR---EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           D  ++ L   N     L+    ++     Q    + +  +  +++ N   +    S ++ 
Sbjct: 100 DNMQAQLAVANADATRLQSLVGAQLVSRSQYDQAIAQRDALRAQLQNAQRNVQVASDQLA 159

Query: 168 LTRMRS 173
           +  +RS
Sbjct: 160 IAGIRS 165



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 80/271 (29%), Gaps = 36/271 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V    +++V   +  K+  +      R++     + L  L +  Q+ L+  +    +   
Sbjct: 40  VVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDADAQRSLSASQLSAAR--- 96

Query: 212 SQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           SQ D  Q +  V  +    L+  +  Q       ++   + +         +   L+  Q
Sbjct: 97  SQVDNMQAQLAVANADATRLQSLVGAQLVSRSQYDQAIAQRDA--------LRAQLQNAQ 148

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--------LMKIV 322
           R       +L I     +   + +P AG +V  ++                    +  IV
Sbjct: 149 RNVQVASDQLAIAGIRSDFNVVRAPFAG-VVTAKAAQPGEIVSPLSAGGGFTRTGIGTIV 207

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              +   I  +V    I  V+           Y + +       +  I P   +      
Sbjct: 208 -DMESLEIEVEVGESYIGRVQPKMPVEAVLNAYPEWK---IPGEVIAIIPTADRGKAT-- 261

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                 V +++   A    +  +       V
Sbjct: 262 ------VKVRV---ALKVKDPRIVPEMGVRV 283


>gi|84622035|ref|YP_449407.1| hypothetical protein XOO_0378 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84365975|dbj|BAE67133.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 156

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 47/147 (31%), Gaps = 6/147 (4%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            EK  +++  L QQ+       ++ +  + E +     +   + +  L+       +   
Sbjct: 4   AEKGILTKVQLLQQQ----DIAIQNQGQLEELQKHALDLRVEHSQLQLQLEQTPATLEAK 59

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
                R  AD    L+     R    + +P  G +      +        QPL+ ++   
Sbjct: 60  RNDIARQIADVAQSLSET-GVRRSVVLRAPTDGMVTNLLVHA-GQPVGAQQPLITLLSKD 117

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRF 352
                   V  K +  V  G    +R+
Sbjct: 118 IALRAELWVPSKAVGFVTCGDRVLLRY 144


>gi|305667534|ref|YP_003863821.1| acriflavin resistance protein AcrE [Maribacter sp. HTCC2170]
 gi|88709584|gb|EAR01817.1| acriflavin resistance protein AcrE, putative [Maribacter sp.
           HTCC2170]
          Length = 359

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 67/203 (33%), Gaps = 18/203 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +S  DL  +   V  S  E R          +    L++E +      L +I+ +    +
Sbjct: 93  ISNTDLTAKLGQVNASITEARAAYTNADKDYKRFTALFNENSAS-QKELDDITANYNMAK 151

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                       +        I +P  GT+  N+  +  + A    PL++ V       +
Sbjct: 152 ARLEGAKQMKNEVNAQFSYANIRAPFTGTVT-NKFINVGDMANPGMPLLE-VESPGKFQV 209

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A V   +I  +K      V         E+  K  + ++         N   Q  + V 
Sbjct: 210 LAMVPESEILQIKANTEVDVVL----KSLEETVKGKVVEVSTSA----KNTGGQ--FMVK 259

Query: 391 LKITDLAFSDNNIELRNGFPAEV 413
           +++       +++ + +G  A V
Sbjct: 260 VELD-----KSDVNIMSGMYATV 277



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 40/103 (38%), Gaps = 6/103 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K  V+ G ++ +G  L++  + + T  +     SI   R       +  D    ++
Sbjct: 71  GHVDKIYVQVGDKVRKGQQLISISNTDLTAKLGQVNASITEARAAY----TNADKDYKRF 126

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             L     + +++L D    Y+   +++   G   +   +  +
Sbjct: 127 TALFNENSASQKELDDITANYNMAKARL--EGAKQMKNEVNAQ 167


>gi|301613516|ref|XP_002936257.1| PREDICTED: Lebercilin-like [Xenopus (Silurana) tropicalis]
          Length = 727

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 71/207 (34%), Gaps = 6/207 (2%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D+ T  ++  + + I  LR  +   ++ L  L N+  +L++    +E+ L  F    +  
Sbjct: 201 DLVTKRVLSARLLKINELRNELTDHQTKLKELQNENKILKRLQFRQEKALTKFEDTENEI 260

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE- 207
              +  +        ++    R+R       ++E +       L      L  +K L E 
Sbjct: 261 SQLISRHN-----NEIRTLRDRLRKSQERERNMEKRLKDAEEELYRTNNTLKKLKQLSEN 315

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +N   + +L ++  I+     E    + + +  L      +    L       +   + +
Sbjct: 316 RNLAEREELTKKLDIMESKLDEKERRVKDLEKNLELTQSSFQRQLLSEKKKAHDAQEENK 375

Query: 268 QNQRTFADEMSKLTILEKTREQKTILS 294
             Q        KL   E+    K I +
Sbjct: 376 TFQEELQRLTQKLKEKERELHAKNIYA 402


>gi|15643121|ref|NP_228164.1| hypothetical protein TM0353 [Thermotoga maritima MSB8]
 gi|4980856|gb|AAD35440.1|AE001716_3 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 335

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 48/143 (33%), Gaps = 16/143 (11%)

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L   ++  E  T++SP++G +         +       ++ IV  +    +   ++   +
Sbjct: 125 LEKAKENLENTTVVSPVSGVVQAVNVD-VGDRVSVGTSIVTIV-ETDTLRVEGSISEYDL 182

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           ++VK+G  A   F              +++I P+               V +   + +F 
Sbjct: 183 KNVKEGMKAVFTFEQLGLT----LTGKVKRISPVAETSGG---------VTVIPVEFSFD 229

Query: 400 DNNIEL-RNGFPAEVLFTAKNTT 421
                L   G   +V    K  T
Sbjct: 230 QTPPSLVIPGLTCDVEIIIKEAT 252



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
            +V   G++  +    ++ S  SG + +  VE G  +  G  +   +D +  
Sbjct: 54  ETVEIVGQVTADT--KKVTSKVSGDVLEIYVEEGDVVQVGQKIAKIDDTDYQ 103


>gi|17230636|ref|NP_487184.1| hypothetical protein all3144 [Nostoc sp. PCC 7120]
 gi|17132239|dbj|BAB74843.1| all3144 [Nostoc sp. PCC 7120]
          Length = 439

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 69/211 (32%), Gaps = 3/211 (1%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
              +     +++F     ++     +     R      +  +  +   +A L +    L 
Sbjct: 97  LQPRVQGQVTQIFVRSGDAIASGAAVIQIDPRQQQAAVISNDAATQASKAQLENANATLK 156

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            ++     N V+   LNQQE   Y S  +      + K+   +             + ++
Sbjct: 157 SLEAERLSN-VADVRLNQQEYDRYASLADQGAVSRQTKDQYANRLATARANLNAIESRIQ 215

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                + Q Q++     +     +   +   I +P  GT+         ++   S PL+ 
Sbjct: 216 AQKASIAQAQKSVQQAQANTDEQQVQLQFYRITAPFEGTVGNIPV-KIGDFVNSSTPLLT 274

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I   ++   +   V  ++   +++G    + 
Sbjct: 275 IT-QNRPLEVNISVPLERGPQLRQGMPVEIM 304



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               V ++    G + +  V +G  I  G  ++  +  +    +     + +  +  ++ 
Sbjct: 91  SRRSVTLQPRVQGQVTQIFVRSGDAIASGAAVIQIDPRQQQAAVISNDAATQASKAQLEN 150

Query: 113 EKSAL-----DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             + L     + L+N  DV     E      L   G         +   +++   +L   
Sbjct: 151 ANATLKSLEAERLSNVADVRLNQQEYDRYASLADQGAVSRQTKDQYANRLATARANLNAI 210

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +R+++   +    +      +A     Q  L   +
Sbjct: 211 ESRIQAQKASIAQAQKSVQQAQANTDEQQVQLQFYR 246


>gi|325115639|emb|CBZ51194.1| conserved hypothetical protein [Neospora caninum Liverpool]
          Length = 2636

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 69/212 (32%), Gaps = 9/212 (4%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            LT E ++  + I  +    + +R  +  E+  L     +     +    R E+      +
Sbjct: 1444 LTQELLDEKERIARQLADQEQMRAMLSAEREKLQEERARSGEALQRERERLEEENGRETQ 1503

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                  +      + +    +       ++     + E K    R LLS  ++       
Sbjct: 1504 RLEAQRERLKEKEAEIDAEKERWQAEREAVESRLREEEEKVEQGRRLLSQQREAFEEDVR 1563

Query: 205  LFEKNAVSQNDL---------NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
               +   ++ +             ER + +   +  E I E++  L    E   EA  E 
Sbjct: 1564 KEREQFRAEQEAVLADFRSQCQAAERELGEQKAQQEEMIEEERQRLLQSEERQQEAYAEQ 1623

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             N L+ +  ++ Q +     ++S+    E+  
Sbjct: 1624 INQLRSLEEEVHQQKLHHQQDVSRHLEREEAL 1655



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/182 (10%), Positives = 54/182 (29%), Gaps = 6/182 (3%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            K L   +  EK  +       + +     +  E+L +   +      +          R 
Sbjct: 1442 KKLTQELLDEKERIARQLADQEQMRAMLSAEREKLQEERARSGEALQRERERLEEENGRE 1501

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
             +    +   +     +++ +    +A   + +  L   +   E+       L  Q+R  
Sbjct: 1502 TQRLEAQRERLKEKEAEIDAEKERWQAEREAVESRLREEEEKVEQG----RRLLSQQREA 1557

Query: 224  YKSTL--ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            ++  +  E  +   EQ+ +L         A  E      +    +E+ ++       +  
Sbjct: 1558 FEEDVRKEREQFRAEQEAVLADFRSQCQAAERELGEQKAQQEEMIEEERQRLLQSEERQQ 1617

Query: 282  IL 283
              
Sbjct: 1618 EA 1619



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 85/226 (37%), Gaps = 23/226 (10%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            +  +   ++  ++  ++  R    +  +   + L  +     +  E++ E+L +   +  
Sbjct: 1461 DQEQMRAMLSAEREKLQEERARSGEALQRERERLEEENGRETQRLEAQRERLKEKEAEID 1520

Query: 147  STCS--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSH 195
            +     +     + S  R  + K+ + R +   + +          E   +   A+L+  
Sbjct: 1521 AEKERWQAEREAVESRLREEEEKVEQGRRLLSQQREAFEEDVRKEREQFRAEQEAVLADF 1580

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERI-VYKSTLELRENIHEQKNMLRHINELYDEAN-- 252
            +      +    +    Q ++ ++ER  + +S    +E   EQ N LR + E   +    
Sbjct: 1581 RSQCQAAERELGEQKAQQEEMIEEERQRLLQSEERQQEAYAEQINQLRSLEEEVHQQKLH 1640

Query: 253  --------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                    LE    L E  R + +++++  DE  KL+  ++   ++
Sbjct: 1641 HQQDVSRHLEREEALFERERRVREDEQSVQDEKQKLSKEKQGVARQ 1686



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 77/212 (36%), Gaps = 27/212 (12%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS- 147
            +    D ++ ++V ++ LR  +D EK+ L    +  +   +  + +EE+L     K  S 
Sbjct: 1189 ESREQDSLNRQRVELEELRFSLDREKAELGARISATEDERRRLKKKEEELARREAKAQSK 1248

Query: 148  ----------------------TCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENK 184
                                     +       S++R    +L R  R ++    +++ +
Sbjct: 1249 EEELRREEMEVERRTQAVALKAEEEEQKELDRVSLWRQKNEELDRRARLLHEQETEMDAR 1308

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  LR   +  +++    K   ++    Q+   ++++   +    +   + E+K  L   
Sbjct: 1309 AHALRRQETERKREDEREKKKLQQ---LQDAFLEEKKNFAREKGRVEAQLDEEKKRLAEE 1365

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             +  +     F  Y++E      + +R    E
Sbjct: 1366 KKALEHDRKNFEAYVEEERAKWGEERRAANAE 1397



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 62/203 (30%), Gaps = 15/203 (7%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            T  ++ ++  +K     ID EK          +   +  E + EQ    L +      + 
Sbjct: 1502 TQRLEAQRERLKEKEAEIDAEKERWQAEREAVESRLREEEEKVEQGRRLLSQQREAFEED 1561

Query: 153  FNYGISSVYRSLKMKLTRMRSI-YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                        +  L   RS       +L  + +    ++   ++ L   +   ++   
Sbjct: 1562 VRKEREQFRAEQEAVLADFRSQCQAAERELGEQKAQQEEMIEEERQRLLQSEERQQEAYA 1621

Query: 212  SQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHI----------NELYDEANLEFANYLK 260
             Q N L   E  V++  L  ++++         +           +   +   + +   +
Sbjct: 1622 EQINQLRSLEEEVHQQKLHHQQDVSRHLEREEALFERERRVREDEQSVQDEKQKLSKEKQ 1681

Query: 261  EI---SRDLEQNQRTFADEMSKL 280
             +    R LE+ Q       + L
Sbjct: 1682 GVARQRRQLEEAQTHQKQVEAAL 1704



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 22/227 (9%), Positives = 84/227 (37%), Gaps = 20/227 (8%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            LL  +     + +  ++  ++ +R  +  E+ A++    +++   +    ++E+      
Sbjct: 1091 LLQSQVQRQREGVMEEEKHLREMRAQVTAEREAMEARWQQFEKQRQELLEKKEKWRKTAQ 1150

Query: 144  KYHSTCSKVFNYGISS---VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            +      + F+  I +        K ++ R  +   ++++   + SL R  +   +   +
Sbjct: 1151 QKRDEL-QAFSLRIRADKKELDEKKKEVARDTTSLKDKIESREQDSLNRQRVELEELRFS 1209

Query: 201  MMKNLFEKNA------VSQNDLNQQERIVYKSTLELRENIHEQK----------NMLRHI 244
            + +   E  A        +  L ++E  + +   + +    E +            +   
Sbjct: 1210 LDREKAELGARISATEDERRRLKKKEEELARREAKAQSKEEELRREEMEVERRTQAVALK 1269

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             E  ++  L+  +  ++ + +L++  R   ++ +++        ++ 
Sbjct: 1270 AEEEEQKELDRVSLWRQKNEELDRRARLLHEQETEMDARAHALRRQE 1316



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 70/232 (30%), Gaps = 16/232 (6%)

Query: 79   LQGTPLLTFEDI--ETTDLIDLKKVSIKNLRCHIDTEK-----------SALDFLNNKYD 125
             +G      ++      +     +   KN   +++ E+           +  D    +++
Sbjct: 1347 EKGRVEAQLDEEKKRLAEEKKALEHDRKNFEAYVEEERAKWGEERRAANAEFDKKKKEWE 1406

Query: 126  VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                + E+      + + K      +          +  +  L     I     D E   
Sbjct: 1407 EERSSGEAELVAAQERIHKTEKELEEEEKRRSEETKKLTQELLDEKERIARQLADQEQMR 1466

Query: 186  SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHI 244
            ++L A     Q++        ++      + N +E    ++  E L+E   E        
Sbjct: 1467 AMLSAEREKLQEERARSGEALQRERERLEEENGRETQRLEAQRERLKEKEAEIDAEKERW 1526

Query: 245  NELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                +  E+ L       E  R L   QR   +E  +    +   EQ+ +L+
Sbjct: 1527 QAEREAVESRLREEEEKVEQGRRLLSQQREAFEEDVRKEREQFRAEQEAVLA 1578


>gi|16080382|ref|NP_391209.1| ABC transporter protein [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221311277|ref|ZP_03593124.1| hypothetical protein Bsubs1_18071 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315604|ref|ZP_03597409.1| hypothetical protein BsubsN3_17987 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320520|ref|ZP_03601814.1| hypothetical protein BsubsJ_17955 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324804|ref|ZP_03606098.1| hypothetical protein BsubsS_18106 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|81556012|sp|O35007|YVRP_BACSU RecName: Full=Putative efflux system protein yvrP
 gi|2635826|emb|CAB15319.1| putative ABC transporter component [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|2832799|emb|CAA11723.1| YvrP protein [Bacillus subtilis]
          Length = 397

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 43/114 (37%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG++  E           G IKK  V+ G Q+ +G  L  +E  + +D ++   + I+  
Sbjct: 63  SGKVEPEKQQKVYIDSEKGSIKKTYVKEGDQVKKGDKLFEYEGEDHSDEVEQANLQIEMT 122

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              I+  + ++     K  V  K  +++ +  LD       T           +
Sbjct: 123 NLQINRLQKSITETEKKLKVAGKEEKNQLQDELDQTNFDLKTSQLELKQHQKEL 176



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 78/214 (36%), Gaps = 7/214 (3%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENI 234
             ++ ++++   ++         +     LFE +     +++ Q    +  + L++    
Sbjct: 71  QQKVYIDSEKGSIKKTYVKEGDQVKKGDKLFEYEGEDHSDEVEQANLQIEMTNLQINRLQ 130

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                  + +     E   +  + L + + DL+ +Q        +L  L K +    I S
Sbjct: 131 KSITETEKKLKVAGKEEKNQLQDELDQTNFDLKTSQLELKQHQKELAGLTKNKGSNVITS 190

Query: 295 PIAGTIVY-NQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
              G +   NQ  +      Q + P ++IV  +    +++++    +  +KKG    V  
Sbjct: 191 KHDGIVQSVNQDIADGATGDQAAGPYIQIV-STGKYLVKSQINELLMDTIKKGSKVRVTL 249

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
                  E ++K  +  I  + +      +++ +
Sbjct: 250 ---KTGGEGEWKGKVTSIGKLPAGAGEGEESESF 280


>gi|332664786|ref|YP_004447574.1| RND family efflux transporter MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332333600|gb|AEE50701.1| efflux transporter, RND family, MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 357

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 66/200 (33%), Gaps = 26/200 (13%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            ++ER++ +     +E   +       + E          N   E  R   +        
Sbjct: 107 LRKERLLVQKFNAQKEYESQLLGYEALLKEK--------TNQEAEAVRQKLKASTGLLAL 158

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
              L  LE    +  + +PI G +   Q      + +  Q L +I   +   ++ AKV  
Sbjct: 159 DIDLKELEHDLARTNLKAPITGVLAQVQI-QKGMHIRPGQELYRIY-SADQLFVEAKVLE 216

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             +  +K G  A V+     ++      A + +IDP++ +            V LKI   
Sbjct: 217 SDLPLLKTGQQALVKSVANPEVVY---AANLAEIDPMVDEHGLLN-------VRLKI--- 263

Query: 397 AFSDNNIELRNGFPAEVLFT 416
                N+ L  G  A     
Sbjct: 264 -LHPRNLLL--GMNANAEIK 280


>gi|120437412|ref|YP_863098.1| HlyD family secretion protein [Gramella forsetii KT0803]
 gi|117579562|emb|CAL68031.1| HlyD family secretion protein [Gramella forsetii KT0803]
          Length = 397

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/260 (11%), Positives = 90/260 (34%), Gaps = 15/260 (5%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR---SIYLNRLDLENKS 185
            A + R+  L     +  S   K+ +Y      +   + ++  +   SI+ + ++++   
Sbjct: 45  SAIKERKTALSTQQRELKSEIEKLNSYIQKKEKKQAAVLVSTQKLNDSIFKHFVEVQGNV 104

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              + ++   +    + +    +       +++ +R+       L   + +Q+     + 
Sbjct: 105 ETDKNIILYPEYSGVLTEVYVNEG----QQVSKGQRLAKIDDGGLSSQVAQQE-TQTALA 159

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +   E      +          + +  +   +     L+    +  I +P +G I  N  
Sbjct: 160 KTTFERRKRLWDQKIGSEIQFLEAKANYEASLDATNQLKSQLGKTIIKAPFSGVI-DNVI 218

Query: 306 FSSSNYAQQSQP-LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                   Q Q  ++++V  S   Y++A +    + ++K G   ++           +FK
Sbjct: 219 AEQGQVVNQGQTEVIRLVNLSD-MYVKASLPENYLNNIKVGTEVSINLASIGQ----EFK 273

Query: 365 AIIEKIDPIISQQDNNLQTQ 384
             + ++   I+  +     +
Sbjct: 274 GTVRQVGNYINPDNRTFDVE 293



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 7/140 (5%)

Query: 44  VSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V   G +  + N   I  P  SG++ +  V  G Q+ +G  L   +D   +  +  ++  
Sbjct: 98  VEVQGNVETDKN--IILYPEYSGVLTEVYVNEGQQVSKGQRLAKIDDGGLSSQVAQQETQ 155

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
               +   +  K   D         E  F   +      L   +   S++    I + + 
Sbjct: 156 TALAKTTFERRKRLWDQKIGS----EIQFLEAKANYEASLDATNQLKSQLGKTIIKAPFS 211

Query: 163 SLKMKLTRMRSIYLNRLDLE 182
            +   +   +   +N+   E
Sbjct: 212 GVIDNVIAEQGQVVNQGQTE 231


>gi|161830733|ref|YP_001596035.1| auxiliary membrane fusion protein family transporter [Coxiella
           burnetii RSA 331]
 gi|161762600|gb|ABX78242.1| auxiliary transport protein, membrane fusion protein family
           [Coxiella burnetii RSA 331]
          Length = 326

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 59/403 (14%), Positives = 126/403 (31%), Gaps = 89/403 (22%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
            L R     + G++ L   S   P+ +     G+ +   + V      SG++K   V  G
Sbjct: 2   RLIRPIFWLLFGMLLLSGCSKNQPVLLQGYVEGQFIYLSSSV------SGLLKSLLVYRG 55

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +   L   +        + ++  ++  +  +  EK  L+ L               
Sbjct: 56  DSVKEDQTLFILDP-------EPQESELQEAKAKLTQEKENLENL--------------- 93

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                  G+  +  +++      ++   +  + T  R  +L R+   +K  L +A     
Sbjct: 94  -----VKGQRQTILNRIIAEREQAIADMIYAQQTLTRFQHLYRVRAISKDELDKATADYK 148

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                      +K  V+Q + N  E             + E+K+++     + D A    
Sbjct: 149 ----------AKKQIVNQTEANLAE-----------AQLGERKHLILAQQAVVDAAQANV 187

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  + E                          +QKT+++P  G I     F    Y    
Sbjct: 188 AKLIWE-------------------------LDQKTVVAPKNGNIFD-TFFKVGEYVPAG 221

Query: 316 QPL-MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           QP+   + P++        +    +  +K G     +       R     A +  I P  
Sbjct: 222 QPVTALLTPNNIKLIF--YIPEPLLSRLKLGTVVEFKCDGCTIQR-----AKVTYISPEA 274

Query: 375 SQQDNNLQTQ-EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 + +Q    +++ ++       N ++   G P +V   
Sbjct: 275 EYTPPIIYSQKSRAKLVYRVECAIPEKNALKFHAGQPVDVYLH 317


>gi|330988048|gb|EGH86151.1| hypothetical protein PLA107_23695 [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 440

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 54/158 (34%), Gaps = 4/158 (2%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  SV +  E++     V       G++ +F V+    +  G  LL FE+       D+
Sbjct: 191 PVRQSVLAPAEVVPLGGRVVAAPLD-GVVAEFLVKPNQVVKTGDLLLRFENTTLKAQADV 249

Query: 99  KKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            + ++      +             +++ D+L    E +  +          +  +    
Sbjct: 250 AERALGVAEAELKANSQRSFADAESSSRIDLLAARVEQKRAERDYARELLKRSEVRAERD 309

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           GI+    + +     +++        +   + LR  L+
Sbjct: 310 GIAVFADAQRWLGKPVQTGERLLEIADPTQAELRIELA 347



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 13/128 (10%), Positives = 40/128 (31%), Gaps = 2/128 (1%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +  V  N + +   ++ +      +   +       + E   +AN + +    E S  
Sbjct: 218 VAEFLVKPNQVVKTGDLLLRFENTTLKAQADVAERALGVAEAELKANSQRSFADAESSSR 277

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-P 323
           ++        + ++     +  ++  + +   G  +  +         Q  + L++I  P
Sbjct: 278 IDLLAARVEQKRAERDYARELLKRSEVRAERDGIAVFADAQRWLGKPVQTGERLLEIADP 337

Query: 324 HSKLTYIR 331
                 I 
Sbjct: 338 TQAELRIE 345


>gi|291617084|ref|YP_003519826.1| MexA [Pantoea ananatis LMG 20103]
 gi|291152114|gb|ADD76698.1| MexA [Pantoea ananatis LMG 20103]
          Length = 382

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 63/188 (33%), Gaps = 11/188 (5%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +   +G + ++           GII+K     G ++  G  L   +        D     
Sbjct: 51  AGRVTGSMTSDVRPQV-----DGIIQKRLFTEGDEVKAGQVLYQIDPASYQASYDQAVAQ 105

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +KN +  + + K   +    +Y  L K      +   D    Y    + V  Y  +    
Sbjct: 106 LKNAQALVKSSKLKAE----RYAALVKDNGVSRQDADDAQATYQQNVASVDQYRAAVESA 161

Query: 163 SLKMKLTRMRSIYLNRLDLENKS--SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + +  T++++    R+ + + +  +L+ A  ++    +  +  ++     S   L +  
Sbjct: 162 RINLNYTQIKAPISGRIGISSVTPGALVTASQTTALATIRALDPIYVDLTQSSVQLLKLR 221

Query: 221 RIVYKSTL 228
           R       
Sbjct: 222 RQQASLQQ 229



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 65/246 (26%), Gaps = 35/246 (14%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q D  + K LF +    +      +           + + + KN    +     +A    
Sbjct: 65  QVDGIIQKRLFTEGDEVKAGQVLYQIDPASYQASYDQAVAQLKNAQALVKSSKLKAERYA 124

Query: 256 A---------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           A             +     +QN  +     + +           I +PI+G I    S 
Sbjct: 125 ALVKDNGVSRQDADDAQATYQQNVASVDQYRAAVESARINLNYTQIKAPISGRI-GISSV 183

Query: 307 SSSNYAQQSQP--LMKI---------VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           +       SQ   L  I         +  S +  ++ +     +Q  K G   TV+    
Sbjct: 184 TPGALVTASQTTALATIRALDPIYVDLTQSSVQLLKLRRQQASLQQNKDGVPVTVKL--- 240

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            D         +E  +  + +    +                F +   EL  G       
Sbjct: 241 EDGTTYDHPGKLELTEVSVDEATGTVTL-----------RAIFPNPQHELLPGMYVRASV 289

Query: 416 TAKNTT 421
           T    +
Sbjct: 290 TNGVKS 295


>gi|295700561|ref|YP_003608454.1| efflux transporter RND family, MFP subunit [Burkholderia sp.
           CCGE1002]
 gi|295439774|gb|ADG18943.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
           CCGE1002]
          Length = 383

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 73/215 (33%), Gaps = 21/215 (9%)

Query: 209 NAVSQND-LNQQERIVYKSTLELREN----IHEQKNMLRHINELYDEANLEFANYLKEIS 263
             V Q   ++ QE    +  + L ++    + +       + +   E +    +      
Sbjct: 84  GLVRQVAFVSGQEAKAGQILVRLNDDSDVALLQSLQAAAQLAQTVYERDRAQYDIKAIAK 143

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L+ +      + +++   +   ++KTI +P AG  +   + +   Y      ++ +  
Sbjct: 144 AQLDADAADLKGKKAQVAQQQALVDKKTIRAPFAGR-LGITTINPGQYLNPGDTIVTLQA 202

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                Y    V  +Q+  +  G T +V    Y+    + F   I+ + P +     N+Q 
Sbjct: 203 ID-PIYADFSVPQQQLGQLAIGATVSVDTNAYS---GQSFTGKIQSMSPKVDSATRNVQI 258

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                      + +  +   +L  G  A V   + 
Sbjct: 259 -----------EASVDNRERKLLPGMYANVKIDSG 282


>gi|162146586|ref|YP_001601045.1| HlyD family secretion protein [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161785161|emb|CAP54707.1| putative secretion protein, HlyD-family [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 343

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 70/231 (30%), Gaps = 21/231 (9%)

Query: 222 IVYKSTLELRENIHEQKNMLRH-INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            V  +T  + E   +    L          +    A   ++     EQ +  +AD ++ L
Sbjct: 86  AVASATARVNERQADLTLRLAQHQRRQQLSSASASAEEKQQFEAVAEQAKAQYADALAAL 145

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
           +      ++  + S + G +         ++A      ++++  ++  ++       +++
Sbjct: 146 SQARMNLDRTQVRSTVNGYVTNLTMR-VGDFATAGVSDIEVI-DAESYWVDGYFEETRMR 203

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT--QEYYE---------V 389
            +  G    +    YA       ++I   I    +Q+           Y          V
Sbjct: 204 GIYPGALVRIDLMGYATPLWGHVESITRGISSANAQRSTQGLPLVNPVYTWVRLAQRIPV 263

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN----TTLAQEIIHPITDNWPK 436
            + I  L      I L  G  A V              + ++  +  +  +
Sbjct: 264 RVHIDAL---PAGITLAAGMTASVSIVTPEGRQPRVTLRALVAQLRQSMHR 311



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/167 (11%), Positives = 51/167 (30%), Gaps = 15/167 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSS----GEILNEDNVVEIKSPF 63
              R+       + +L+I  ++ L  W          ++     G++     V  I    
Sbjct: 3   ERARHVIRIATTLAILAIATVVVLGLWDYY------TAAPWTRNGQVRV--QVANIAPRV 54

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I   +V +   + +G  L + +  +    +      +   +  +    +       +
Sbjct: 55  SGQIVDVRVTDNQYVHRGDVLYSIDPFDFRIAVASATARVNERQADLTLRLAQHQR---R 111

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             +   +  + E+Q  + + +            +S    +L     R
Sbjct: 112 QQLSSASASAEEKQQFEAVAEQAKAQYADALAALSQARMNLDRTQVR 158


>gi|78188841|ref|YP_379179.1| secretion protein HlyD [Chlorobium chlorochromatii CaD3]
 gi|78171040|gb|ABB28136.1| Secretion protein HlyD [Chlorobium chlorochromatii CaD3]
          Length = 406

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 73/202 (36%), Gaps = 6/202 (2%)

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L   L + +  +   + +    A   +D   ++R          E +  +      +   
Sbjct: 98  LEERLLARRAAVLRAEAVVRSAAAKLHDAEARQRFAVGQEQRYTELLAVRAASSEQVEAK 157

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             EA +  A  L      L   +   A   +    LE+ R    +++P  G +  N+   
Sbjct: 158 RQEAEVARATALSS-QAALVAAREELAAAKADYQGLEEQRRNLLLIAPADGLVT-NRLVE 215

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
           + +     Q +++I+ + +  ++ A+    Q   ++ G  ATVR             A +
Sbjct: 216 AGSTVVAGQSVLEII-NPQSVWVAARFDQLQSAGLRAGLPATVRL---RSQAGAPLAASV 271

Query: 368 EKIDPIISQQDNNLQTQEYYEV 389
           E+I+P+  +    L  +  + V
Sbjct: 272 ERIEPLADRITEELLAKVVFNV 293



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/153 (10%), Positives = 48/153 (31%), Gaps = 2/153 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL- 117
           I    SG + +  V+ G  +  G  +   + ++  + +  ++ ++      + +  + L 
Sbjct: 65  IGPVASGRVLRLLVDVGDTVRAGQVVGEIDPVDLEERLLARRAAVLRAEAVVRSAAAKLH 124

Query: 118 -DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                 ++ V ++   +    +     +      +      ++   S    +     +  
Sbjct: 125 DAEARQRFAVGQEQRYTELLAVRAASSEQVEAKRQEAEVARATALSSQAALVAAREELAA 184

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + D +      R LL     D  +   L E  
Sbjct: 185 AKADYQGLEEQRRNLLLIAPADGLVTNRLVEAG 217


>gi|24373273|ref|NP_717316.1| HlyD family secretion protein [Shewanella oneidensis MR-1]
 gi|24347514|gb|AAN54760.1|AE015616_6 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 308

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 61/179 (34%), Gaps = 3/179 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E + + + +P   +I K  V  G Q+  G  LL  +       +  ++  +K  +   
Sbjct: 22  TVERDRLTLTAPVGELIHKINVVEGQQVKAGEVLLELDSTAVNARLAQRQAELKQAQAKF 81

Query: 111 D--TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF-NYGISSVYRSLKMK 167
           D     +  + ++    VL  A  S +E    F        +KV     + +   +    
Sbjct: 82  DEAVTGARFEDIDKARAVLNGANASVKEAKQSFERTQRLFKTKVLSQADLDAARAAKDTS 141

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           L +      +   L+N +   +   +    D+ +     E+ A+    L   +  V  +
Sbjct: 142 LAKQAEAEQSLRLLQNGTRSEQIEQARSAVDVAIAAVALEQKALKDLSLVAAKHAVVDT 200


>gi|320162043|ref|YP_004175268.1| secretion protein HlyD family protein [Anaerolinea thermophila
           UNI-1]
 gi|319995897|dbj|BAJ64668.1| secretion protein HlyD family protein [Anaerolinea thermophila
           UNI-1]
          Length = 311

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/142 (11%), Positives = 44/142 (30%), Gaps = 2/142 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           + ++++SG ++       +     G +++  V  G  +  G  L   ++      +   K
Sbjct: 41  DSTITASGTVIPA-QYQWVGFESGGTLRELLVATGDTVSPGQILARLDETILRAAVTQAK 99

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            ++   R +I  E   L   +++   +     +                       + S 
Sbjct: 100 AALIRAR-NIRNELEELPKEDSRAAAVAAVASAEANLDRLERSGARQIEIDAAKAQLESA 158

Query: 161 YRSLKMKLTRMRSIYLNRLDLE 182
             SLK          + + D +
Sbjct: 159 RASLKALEEGASRAQITQADAD 180



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 62/201 (30%), Gaps = 25/201 (12%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L++ ER   +  +E+     + ++    +  L + A+             + Q       
Sbjct: 135 LDRLERSGAR-QIEIDAAKAQLESARASLKALEEGAS----------RAQITQADADVEA 183

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             + L   E      T+ +P  G +V        +     QP++ +   SK+      ++
Sbjct: 184 AQAALEQAEAALRSATLQAPFGGQVVEIA-PKVGDVLAPGQPIILLADLSKMQVETTDLS 242

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              +  +  G    V F     I     +  + KI    +   N       Y V ++   
Sbjct: 243 EVDVAQIAIGDDVLVTFDALEGIT---VRGKVVKIALKAAPGVNVT-----YPVTIE--- 291

Query: 396 LAFSDNNIELRNGFPAEVLFT 416
               +    LR G  A +   
Sbjct: 292 --LENPPQSLRWGMTAFIKIQ 310


>gi|152969088|ref|YP_001334197.1| putative secretion protein HlyD [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150953937|gb|ABR75967.1| putative secretion protein HlyD [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 380

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 87/296 (29%), Gaps = 48/296 (16%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           ++   +  Q+L       +     F   +  +   +K       S+       + + S  
Sbjct: 75  QSVPVKPNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSLNAALSQAQAELSRA 134

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A     +++    +    + A S   ++ + +        +                  
Sbjct: 135 VAQRDQSRREYARYRKGHAQGAFSDQMVDTRLQTWKADEASVSA---------------- 178

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
             A  +       +   ++    T A  +++L   +   E   + +P  G +      + 
Sbjct: 179 --AQAKVVQARNALDSVVKGKNTTVASLLAQLQKAQFQLENTVVRAPEDGYV-----STV 231

Query: 309 SNYAQQSQ--------PLMKIVPHSKLTYIR--AKVTPKQIQHVKKGYTATVRFPHYADI 358
               +           PLM  VP          A      +Q ++KG  A + FP     
Sbjct: 232 G--LRPGTMSTALGMIPLMTFVPVEGAASREYVAAFRQNALQRLRKGEPAELMFPAIPGT 289

Query: 359 REKKFKAIIEKIDPIISQ----------QDNNLQTQEYYEVILKITDLAFSDNNIE 404
               F+  +  + P I +            + L T     V+LK+TD  F++  + 
Sbjct: 290 ---VFRGEVADVLPAIGESQFQGQGKLLTTDALNTHGRALVVLKVTDPRFAEYALP 342



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 51/173 (29%), Gaps = 10/173 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LR 107
             V I S   G ++   V+    + +G  L T +       +D  +  IK        L 
Sbjct: 62  RTVPIVSQVRGRVQSVPVKPNQMLHKGDVLFTLDPTPFQAKVDDLQAQIKAASQDALSLN 121

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
             +   ++ L     + D   + +    +      F  +   T  + +    +SV  +  
Sbjct: 122 AALSQAQAELSRAVAQRDQSRREYARYRKGHAQGAFSDQMVDTRLQTWKADEASVSAAQA 181

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLN 217
             +    ++           + L A L   Q  L        E   VS   L 
Sbjct: 182 KVVQARNALDSVVKGKNTTVASLLAQLQKAQFQLENTVVRAPEDGYVSTVGLR 234


>gi|110834710|ref|YP_693569.1| HlyD family secretion protein [Alcanivorax borkumensis SK2]
 gi|110647821|emb|CAL17297.1| HlyD family secretion protein, putative [Alcanivorax borkumensis
           SK2]
          Length = 368

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/267 (9%), Positives = 75/267 (28%), Gaps = 12/267 (4%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V    +      L+  L  + +        E +     A ++  + +L        K  +
Sbjct: 95  VLEAQLREAQAQLRRALIGIETAQSQVTQREAEKQAAEAFIAQRKAELD-----AAKKRL 149

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            + +    +       L +R++        +      +         +     D+   Q 
Sbjct: 150 DRTEELALKGAAA---LSMRDDDRAAFQAAKAAVGAAEAQAAAAQAAIGRAKSDVIGAQA 206

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           +     + +  ++   +   + SP  G + Y +             ++ +V      Y+ 
Sbjct: 207 SVEAARATIQRIQADLDDSVLKSPRDGRVQY-RVAQPGEVFSPGGVVLNMV-DLADVYMT 264

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEV 389
             +  +Q   V  G  A +              + +  +     +  +    + +  + +
Sbjct: 265 FFLPTEQAGRVALGTEARLVLDAAPQYVIPAQISFVADVAQFTPKMVETEEERQKLMFRI 324

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFT 416
             +I       +  +++ G P  V   
Sbjct: 325 KARIDPDLLRKHLHQVKTGLPGMVYVR 351



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 43/134 (32%), Gaps = 7/134 (5%)

Query: 30  GLITWSILLPIEIS-----VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           GL  W+              + +G I   +  +++ +  +G +K+     G  +  G  L
Sbjct: 31  GLGAWAWWFVQPKGLPEGFAAGNGRIEAVE--IDVAAKTAGRVKEILANEGDFVRAGQVL 88

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
              + +     +   +  ++     I+T +S +     +    E     R+ +L     +
Sbjct: 89  AKMDSVVLEAQLREAQAQLRRALIGIETAQSQVTQREAEKQAAEAFIAQRKAELDAAKKR 148

Query: 145 YHSTCSKVFNYGIS 158
              T         +
Sbjct: 149 LDRTEELALKGAAA 162


>gi|152984036|ref|YP_001349510.1| hypothetical protein PSPA7_4156 [Pseudomonas aeruginosa PA7]
 gi|150959194|gb|ABR81219.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 302

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 58/207 (28%), Gaps = 20/207 (9%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V +   EL +     +            A       +    R L   +       + L 
Sbjct: 84  AVRQRWAELAQARETLRQRDEEWRRRAQLAGAMSREAIANAGRALRIARAQADAAGAALD 143

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                  +  + +P+ G +   +     +YA   +  + IV      ++       ++++
Sbjct: 144 QALLDLRRSELRAPVDGYVTQLRV-QPGDYATAGETNLFIV-DRHSFWVTGYFEETKLRN 201

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ------QDNNLQTQEYY-------E 388
           V+ G  A +R   +        +  +  I   I+            Q    +        
Sbjct: 202 VRLGAPARIRLMGFD----PLLEGHVASIGRGIADLNENRADSGLPQVSPTFSWIRLAQR 257

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLF 415
           V ++I +L      + L  G    V  
Sbjct: 258 VPVRI-ELDRVPPEVVLAAGMTGSVEV 283



 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 30/112 (26%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               V+ I    SG +    V +  Q+ +G PL   +       +  +   +   R  + 
Sbjct: 41  VSAQVIRIAPEVSGTLDALFVGDNQQVSRGDPLYRIDPSSYRLAVRQRWAELAQARETLR 100

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                          + +   +   + L              +  +  + RS
Sbjct: 101 QRDEEWRRRAQLAGAMSREAIANAGRALRIARAQADAAGAALDQALLDLRRS 152


>gi|319794794|ref|YP_004156434.1| efflux transporter, rnd family, mfp subunit [Variovorax paradoxus
           EPS]
 gi|315597257|gb|ADU38323.1| efflux transporter, RND family, MFP subunit [Variovorax paradoxus
           EPS]
          Length = 538

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 71/212 (33%), Gaps = 8/212 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    I + + + G +    NV  ++   SG++ +   + G  + +G  L T +     +
Sbjct: 90  ARQADIPVQLEALGTVTPLANV-TVQPQVSGVLTEVLFKEGQMVKKGDVLATIDPAPFQN 148

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +     + +     +   +  L     +Y  L        + +             V  
Sbjct: 149 ALAQASGARQRDEAQLAAARVTL----QRYQTLLTQDSIARQDVDTQAALVKQLEGTVAI 204

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLE--NKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
              +     L +  +R+ +    R+ L   +  + +    +     +T +  +  + +V 
Sbjct: 205 DRANEGTAKLNLTWSRITAPVSGRIGLRPVDAGNYISTGTTGGVAVITQIAPIDVEFSVP 264

Query: 213 QNDLNQ-QERIVYKSTLELRENIHEQKNMLRH 243
           Q+ + + QER+   + LE       +   L  
Sbjct: 265 QDRVPEVQERLAQGAQLEATAFDRTRTRQLAK 296



 Score = 40.0 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 64/200 (32%), Gaps = 22/200 (11%)

Query: 201 MMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           + + LF++   V + D+              + +   Q++  +           +     
Sbjct: 121 LTEVLFKEGQMVKKGDVLATIDPAPFQNALAQASGARQRDEAQLAAARVTLQRYQTLLTQ 180

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQK--------TILSPIAGTIVYNQSFSSSNY 311
             I+R     Q     ++     +++  E           I +P++G I   +   + NY
Sbjct: 181 DSIARQDVDTQAALVKQLEGTVAIDRANEGTAKLNLTWSRITAPVSGRI-GLRPVDAGNY 239

Query: 312 AQQSQP-----LMKIVPHSKLTYIRAKVTPKQIQHV--KKGYTATVRFPHYADIREKKF- 363
                      + +I P      +   V   ++  V  +    A +    +   R ++  
Sbjct: 240 ISTGTTGGVAVITQIAPID----VEFSVPQDRVPEVQERLAQGAQLEATAFDRTRTRQLA 295

Query: 364 KAIIEKIDPIISQQDNNLQT 383
           K +   +D ++  Q   +++
Sbjct: 296 KGMFSTLDNLVDTQTGTVKS 315


>gi|313896821|ref|ZP_07830368.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974268|gb|EFR39736.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 330

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 116/326 (35%), Gaps = 24/326 (7%)

Query: 94  DLIDLKKVSIKNLRCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +I  +  S +  R ++ T   E + +D    +   +E+   +   ++           +
Sbjct: 19  SVIAYRSYSAQTARTNLLTGTVEATRIDISAKESGTIEELLLAEGMEVHQGDIAARIRRN 78

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +    +         +    R+++ +R +     S   A   + +         +E+ A
Sbjct: 79  DLMAARLRDEAALAYAQAHLDRAVHGSRAE---DISAAAARTRAARAATDKAAADYERGA 135

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                L  +  I  ++   LRE     +  LR   +   EA L+  +  ++I    E  +
Sbjct: 136 ----QLLAEGAIAPQAFDALREEREASEANLRAAEQ--QEALLKNGSRPEDIHMAAEDVK 189

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTY 329
           R  A     L I +      T+  P  G ++  +++    Y +    L  I+ P     +
Sbjct: 190 RQQAI----LAIDDAAVGDLTVSVPADGVVLT-KNYEPGEYVRAGAALATIIDPQD--VW 242

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           ++  VT   +  ++ G  A V    Y D R +     I++I            T++    
Sbjct: 243 VKVYVTTDVLGDLRIGDAALV----YIDGRAEPLNGTIKEISDAAEYTLRQSITKDERAN 298

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
           ++    +A  + +  L+ G PA+V  
Sbjct: 299 LVFAVKVAVHNEDGALKPGMPADVDL 324



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 84/311 (27%), Gaps = 32/311 (10%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E   ++I +  SG I++  +  G ++ QG            + +   ++  +    + 
Sbjct: 39  TVEATRIDISAKESGTIEELLLAEGMEVHQGDIAARI----RRNDLMAARLRDEAALAYA 94

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                     +   D+   A  +R  +                    +   ++       
Sbjct: 95  QAHLDRAVHGSRAEDISAAAARTRAARAATDKAAADYERGAQLLAEGAIAPQAFDALREE 154

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             +   N    E + +LL+    S  +D+ M          +  D+ +Q+ I+      +
Sbjct: 155 REASEANLRAAEQQEALLKNG--SRPEDIHM----------AAEDVKRQQAILAIDDAAV 202

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF---ADEMSKLTILEKTR 287
            +           + + Y+      A        D +          D +  L I +   
Sbjct: 203 GDLTVSVPADGVVLTKNYEPGEYVRAGAALATIIDPQDVWVKVYVTTDVLGDLRIGDAAL 262

Query: 288 EQKTILS-PIAGTIVYNQS---FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ-HV 342
                 + P+ GTI        ++      + +                KV        +
Sbjct: 263 VYIDGRAEPLNGTIKEISDAAEYTLRQSITKDER--------ANLVFAVKVAVHNEDGAL 314

Query: 343 KKGYTATVRFP 353
           K G  A V   
Sbjct: 315 KPGMPADVDLD 325


>gi|167759830|ref|ZP_02431957.1| hypothetical protein CLOSCI_02193 [Clostridium scindens ATCC 35704]
 gi|167662449|gb|EDS06579.1| hypothetical protein CLOSCI_02193 [Clostridium scindens ATCC 35704]
          Length = 554

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 48/379 (12%), Positives = 115/379 (30%), Gaps = 45/379 (11%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC------HIDTEKSALDFL 120
           I +  V+ G  +  G  L++F+        D ++  +  L         I+    A    
Sbjct: 114 IAQCNVKVGQVVKAGDLLVSFDTTNLER--DNQQSELNTLSAKYSSQDAIEQSGRAAQTQ 171

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHS---------TCSKVFNYGISSVYRSLKMKLTRM 171
                 +E   +S + Q+        S         + +       + +   ++  L   
Sbjct: 172 AQTQAQVEAGIQSLKAQIQQKQADIDSLTQAAQSAGSAAAANAQKAAELKGEMQKNLDAQ 231

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK----ST 227
            +      +L+ +   + +    +   L     L  + A         ++          
Sbjct: 232 DAKKAKLENLQRELDGMDSTSPGYLDTLNKANILTNEIADLSTKYRALDQQYNSIGSTDD 291

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT- 286
             + E + + +  L  +     E     +          + N     + +++L  L    
Sbjct: 292 GGVSEALIQAQAELDSLKASLAEMENSRSVPADTSLTGAQLNNLRTTENLAELAQLTTEE 351

Query: 287 ---REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
              + ++ + +   G I   ++    N A Q   L  +V  +K   +  +V      ++ 
Sbjct: 352 LLAKGREGLKAEFDGIISDVKAL-EGNEAAQGMELFTLV-DNKSVNVILEVPANDFDNLV 409

Query: 344 KGYTATVRF--PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
            G  AT++     Y        K  +  +D I      N +        ++I +   +D+
Sbjct: 410 SGSKATIKIGKSSY--------KGTLVSVDKIA---LPNEKGNPTIGAKIRIDN---ADD 455

Query: 402 NIELRNGFPAEVLFTAKNT 420
           +I +  G   +V  T    
Sbjct: 456 DIVI--GVSGKVAITVDEK 472


>gi|90412339|ref|ZP_01220343.1| hypothetical secretion protein [Photobacterium profundum 3TCK]
 gi|90326601|gb|EAS43000.1| hypothetical secretion protein [Photobacterium profundum 3TCK]
          Length = 251

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 81/273 (29%), Gaps = 70/273 (25%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V  I     G + +  VE+   + +G PL + +D +     ++ K  +      + 
Sbjct: 35  VHSDVTAISPEVGGQVSQLFVEDNQWVSKGAPLFSIDDEDFIANQEIAKSVLDVANAALK 94

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++  +                                             L       
Sbjct: 95  ASQTKTEM-------------------------------------------QLVKIEQAK 111

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           ++I+    + E++++ L+ L    QK L           VS+N    Q+    +++ +L 
Sbjct: 112 QTIHSASANAEHQAAELKRLSRLVQKQL-----------VSKNQFEAQKTRSIEASSKLE 160

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                     +  + L  E             + L   ++     +  + I     E+  
Sbjct: 161 TAKLALAAEQKQYDVLLTE------------RQQLTAQRKQAEANLRLVNIA---LERTV 205

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           + +P +G +   Q      + Q    L+ +VP 
Sbjct: 206 VKAPFSGFVADRQV-QVGKFVQPGMGLIVMVPD 237


>gi|262280960|ref|ZP_06058743.1| membrane-fusion protein [Acinetobacter calcoaceticus RUH2202]
 gi|262257860|gb|EEY76595.1| membrane-fusion protein [Acinetobacter calcoaceticus RUH2202]
          Length = 446

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 79/230 (34%), Gaps = 28/230 (12%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDL 266
             ++Q D   QE  +  S   ++    ++   +  +NE   E   +   Y ++     DL
Sbjct: 87  QLIAQIDSTTQENSLKTSDANIKNLEAQRLQQVASLNEKQLEFRRQQQMYAQDATPRADL 146

Query: 267 EQNQRTFADEMSKLTILEKTRE--------------QKTILSPIAGTIVYNQSFSSSNYA 312
           E  + ++    +++  L+   E                 IL+P  GT+V           
Sbjct: 147 ESAEASYKTAQAQIKALDAQIESAKVTRSTAQTNIGYTRILAPTDGTVVAI-VTEEGQTV 205

Query: 313 QQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +Q    IV  +  +   I+A+V+   I  V+KG             R    + I    
Sbjct: 206 NANQSAPTIVKIAKLQNMTIKAQVSEADIMKVEKGQPVYFTTLGEDTKRYATLRQIEPAP 265

Query: 371 DPIISQQDNNLQTQE----YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           D I S+  N   +      YY  +  +      + + +LR    A+V   
Sbjct: 266 DSISSESTNTTSSTTSSAVYYNALFDVP-----NTDGKLRIDMTAQVYIV 310



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 57/152 (37%), Gaps = 10/152 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     ++ + +  SG +KK  V+ G Q+ QG  +   +     + +   
Sbjct: 46  IENNVLATGTLDA-TKLISVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSTTQENSLKTS 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +IKNL      + ++L+         EK  E R +Q +           +       +
Sbjct: 105 DANIKNLEAQRLQQVASLN---------EKQLEFRRQQQMYAQDATPRADLESAEASYKT 155

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               +K    ++ S  + R   +      R L
Sbjct: 156 AQAQIKALDAQIESAKVTRSTAQTNIGYTRIL 187


>gi|187923572|ref|YP_001895214.1| efflux transporter RND family, MFP subunit [Burkholderia
           phytofirmans PsJN]
 gi|187714766|gb|ACD15990.1| efflux transporter, RND family, MFP subunit [Burkholderia
           phytofirmans PsJN]
          Length = 434

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 55/145 (37%), Gaps = 4/145 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + +++ G +    NV  +    SG++++   + G  + +G  L   +      
Sbjct: 72  ATQGEMPVVLTALGTVTPLANV-TVLPQLSGVLQEVYFKEGQMVKKGDVLAQIDPRPYQI 130

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +D  + ++      + T +  L     L ++  +  +  +++   +  + G   S  + 
Sbjct: 131 SLDNAQGTLARDEALLQTARLDLKRYQTLLSQDSIASQQVDTQASLVRQYEGTVKSDKAN 190

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYL 176
           V  Y +  VY  +   ++    +  
Sbjct: 191 VDTYKLDLVYARITAPVSGRVGLRQ 215


>gi|168701234|ref|ZP_02733511.1| cobalt-zinc-cadmium resistance protein [Gemmata obscuriglobus UQM
           2246]
          Length = 515

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 55/385 (14%), Positives = 119/385 (30%), Gaps = 49/385 (12%)

Query: 35  SILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +   P+      +G +   ++ V  I  P  GI+++  V  G  +  G  L   E  E  
Sbjct: 91  ATAGPLRTVTWRTGRVALNEDRVAHISPPAEGIVREVPVRVGQTVTAGDVLAVIECREFG 150

Query: 94  DL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            L ++L K  I        TE++     N    +      +   ++   L        + 
Sbjct: 151 FLKLELVKARIAAATEREATERTRTTMTNAAELLKLLVASTPAAEIEAKLADKPIGTWRA 210

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
              G S+     + +L  ++S                                    AV+
Sbjct: 211 DLLGASARRLQFRAQLASLKS---------------------------------SSGAVA 237

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           ++ + + +     +       + + +  +R       E  L  A    ++++        
Sbjct: 238 ESVVLKAQAEADAADAAYASLVEDLRYQVR-FQVRQAELKLREAETTLDVAKAKLLTFGM 296

Query: 273 FADEMSKLTILEKTREQKT--ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
             + ++ L  + +  +     + +P AGT+V   + +S     Q Q  M ++      ++
Sbjct: 297 TPEAVNALDPIAEGAKAALLCVRAPFAGTVVEKHAVTSERVGPQFQ--MFVLADLDTVWV 354

Query: 331 RAKVTPKQIQHVK--KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           +A V    +  V+   G   T R             A +     ++ +    L       
Sbjct: 355 QADVFEPDLPLVRDLDGREVTFRSEVAGLAERP---AKVVHTGDLVDKASRTLTL----T 407

Query: 389 VILKITDLAFSDNNIELRNGFPAEV 413
                  L    N+  L+ G  AE+
Sbjct: 408 AEAANRPLKPGSNDRALKPGMLAEI 432


>gi|158424911|ref|YP_001526203.1| secretion protein [Azorhizobium caulinodans ORS 571]
 gi|158331800|dbj|BAF89285.1| secretion protein [Azorhizobium caulinodans ORS 571]
          Length = 373

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 74/213 (34%), Gaps = 17/213 (7%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           E N  S +++ + + ++     E R N+   K     ++ +    + E           +
Sbjct: 82  ELNFKSGDEVQEGQVLLKLRDDEERANLEALKAT-ADVSAIILNRDKEQLKIHAVSQATV 140

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           + +       ++++T  +   ++KT+ +P +G  +  ++     Y      ++ +   + 
Sbjct: 141 DSDTANLKKALAQVTEQQAVVDKKTLKAPFSGR-LGIRAVDLGQYVSAGTTIVTLQSLN- 198

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
             ++   +  + +  +K G         Y     + F+  I  + P +     N+Q    
Sbjct: 199 PIFVDFYLPQQALADIKTGQAVKATVDTYP---GQSFEGTITAVSPKVDTSSRNVQV--- 252

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                      F +++  L  G  A V  +   
Sbjct: 253 --------RAEFKNDDKRLFPGMFATVEVSVGK 277



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 52/150 (34%), Gaps = 3/150 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFS-GIIKKFQVENGSQILQGTPLLTFEDIETT 93
           + L P + S+ + G +  E       +  S G + +   ++G ++ +G  LL   D E  
Sbjct: 49  AALSPWQTSIKAVGSVRAEAGADL--ALESSGTVSELNFKSGDEVQEGQVLLKLRDDEER 106

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             ++  K +       ++ +K  L         ++    + ++ L     +      K  
Sbjct: 107 ANLEALKATADVSAIILNRDKEQLKIHAVSQATVDSDTANLKKALAQVTEQQAVVDKKTL 166

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               S       + L +  S     + L++
Sbjct: 167 KAPFSGRLGIRAVDLGQYVSAGTTIVTLQS 196


>gi|146298668|ref|YP_001193259.1| RND family efflux transporter MFP subunit [Flavobacterium
           johnsoniae UW101]
 gi|146153086|gb|ABQ03940.1| efflux transporter, RND family, MFP subunit [Flavobacterium
           johnsoniae UW101]
          Length = 391

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 92/247 (37%), Gaps = 12/247 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+     + G ++ +G  L T + +E    ++  +  +   + ++   +  L  +    
Sbjct: 77  GILTGIHFKEGQRVKKGQLLYTIDPLEYDTKVEQVRGQVAGAQSNLVNAEEELKRIRPLA 136

Query: 125 D---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           D   V ++  ++   +        +S  + + N  I   Y  ++  +  +  +   RL  
Sbjct: 137 DMNAVSKRELDAAVAKDKAARSNLNSVQASLRNQQIERSYCDIRSPIDGVIGLSNARLG- 195

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
                + R    +    ++ ++ +  +  VS++D  + ++ V     +  E I +   +L
Sbjct: 196 ---DYITRIGNDAKLNTVSKLEKVRVQFTVSESDYLRYQKQV-----KAGERITDLSLIL 247

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
              +    + +L F++   + +      +  F +    L   +  + +  I +     +V
Sbjct: 248 SDGSTHPYKGSLNFSDTKIDPTTGTVTIEAQFPNPDGTLRSGQFAKVRVLIRTQKDAIVV 307

Query: 302 YNQSFSS 308
             ++ + 
Sbjct: 308 PQKAVTE 314


>gi|110641766|ref|YP_669496.1| hypothetical protein ECP_1590 [Escherichia coli 536]
 gi|191173412|ref|ZP_03034940.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli F11]
 gi|300987882|ref|ZP_07178433.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 200-1]
 gi|110343358|gb|ABG69595.1| putative membrane protein [Escherichia coli 536]
 gi|190906254|gb|EDV65865.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli F11]
 gi|300306030|gb|EFJ60550.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 200-1]
 gi|324011409|gb|EGB80628.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 60-1]
          Length = 285

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 73/217 (33%), Gaps = 24/217 (11%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF---EKNAVSQNDLNQQERIVYK 225
           TR   I   ++ +  + S     L+     L   ++L    +K      +LN Q   + K
Sbjct: 35  TRDGKIRAEQVSITPQVSGRIVELNIKDNQLVNARDLLLTIDKTPFQIAELNAQ-AQLAK 93

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  +L +  +E                L+ AN       +++  Q +     + L   + 
Sbjct: 94  AQSDLAKANNEANRRRHLSQNFISAEELDTANL------NVKAMQASVDAAQATLKQAQW 147

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQH 341
              Q  I +P++G +    +    +YA   +PL  +V       I      K+      H
Sbjct: 148 QLAQTEIRAPVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR-----H 201

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +++G  A +          K  +  +  I   I  Q 
Sbjct: 202 IREGAPAQITL----YSDNKTLQGHVSSIGRAIYDQS 234



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 46/160 (28%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +     LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNARDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 156


>gi|325915007|ref|ZP_08177337.1| multidrug resistance efflux pump [Xanthomonas vesicatoria ATCC
           35937]
 gi|325538777|gb|EGD10443.1| multidrug resistance efflux pump [Xanthomonas vesicatoria ATCC
           35937]
          Length = 179

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 49/147 (33%), Gaps = 14/147 (9%)

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +   +   IL+P  G +          Y      LM +VP     +I A     Q+  +
Sbjct: 38  AQINLDNTRILAPRDGQLGQLGVR-QGAYVTNGTQLMALVP--DTLWIVANFKETQMAKI 94

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAF 398
           + G  A+       + R    +  +++I P    +      +  T  + ++  +I     
Sbjct: 95  RIGQRASFTVDALDNAR---LQGRVQEISPAAGSEFSVLPADNATGNFVKIAQRIPLRIS 151

Query: 399 SDNNI----ELRNGFPAEVLFTAKNTT 421
            D +      LR G    V     +TT
Sbjct: 152 VDPDQPLAPRLRPGMSVVVAVDTDSTT 178


>gi|299138708|ref|ZP_07031886.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX8]
 gi|298599344|gb|EFI55504.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX8]
          Length = 463

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/275 (10%), Positives = 67/275 (24%), Gaps = 38/275 (13%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + +   ++    T + S               +A L   + D    K+L++   +++
Sbjct: 96  ASAVDAQKAAIASSKTDVESNIAAEKTARANIDQAKADLEQKKFDFDRAKSLYQDQLIAK 155

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            D + ++     S   L++ I          +      +   A                 
Sbjct: 156 QDYDAKKAAYDVSAATLQQRIASFSQARAQTSSARGHVDQAIAT---------------- 199

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ-----QSQPLMKIVPHSKLT 328
                 L   + +       +P    +                  +   LM +     + 
Sbjct: 200 ------LAGNDYSLGLTQSRAPFDALVTNVPIREGETVVTGIQNAEGSTLMTLA-DMSVI 252

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE-----KIDPIISQQDNNLQT 383
               K+    I +V       V          K     +      +   + + Q      
Sbjct: 253 TAEVKIDETDIVNVAMNQPVDVTVDALPGKIFKGHVTEVGDQALLRTTGLATSQSTTGTE 312

Query: 384 QEY-YEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +   ++VI+ +      D    LR G       T 
Sbjct: 313 EAKDFKVIVTLDKQQSDD----LRPGLSCTAKITT 343



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 51/144 (35%), Gaps = 1/144 (0%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +VS +G+I  +  V  + +   G +    V+ G  +  G  + T E  +    +D +K +
Sbjct: 47  TVSGTGQIKPKTGV-NVGATAFGRVTHLYVKEGDHVKAGQLVATVESAQPASAVDAQKAA 105

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           I + +  +++  +A        D  +   E ++         Y        +Y       
Sbjct: 106 IASSKTDVESNIAAEKTARANIDQAKADLEQKKFDFDRAKSLYQDQLIAKQDYDAKKAAY 165

Query: 163 SLKMKLTRMRSIYLNRLDLENKSS 186
            +     + R    ++   +  S+
Sbjct: 166 DVSAATLQQRIASFSQARAQTSSA 189


>gi|289207472|ref|YP_003459538.1| secretion protein HlyD [Thioalkalivibrio sp. K90mix]
 gi|288943103|gb|ADC70802.1| secretion protein HlyD family protein [Thioalkalivibrio sp. K90mix]
          Length = 275

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 28/205 (13%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ----------RTFA 274
           +   +LR      + +   +NE   E   +  +   +    L + +             A
Sbjct: 85  RVEADLRAAQAAIERLQLELNEANREVE-KAEDLYDQTLIALREVELARIQQATVAARLA 143

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKLTYIRA 332
           +  ++       R+  TI +P +G I      S   +     +  ++ ++       +RA
Sbjct: 144 EARAQRDRARADRDDATIRAPASGRITRIDV-SPGQFVNPALAPAVLAVLGSGDSMRVRA 202

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            VTP +I  + +G   T+    +              ID I  +     + Q Y     +
Sbjct: 203 LVTPDRIGSLSEGQDVTITVGEHEFS---------GTIDRIGWELVGKDEDQRY-----R 248

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTA 417
           +       ++  LR G PA +    
Sbjct: 249 VEAEFSPGDDAVLRPGQPARIELRT 273



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 47/134 (35%), Gaps = 8/134 (5%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNE---DNVVEIKSPFSGIIKKFQVENG 75
           R  LLS +     +    L P   +   +G +           I +P +G I+  +V  G
Sbjct: 13  RRLLLSAVACCAFL---ALTPAGSAAEENGALEGHLDWGQTYRITAPVAGKIEAIEVRPG 69

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + Q T L   +       +   + +I+ L+  ++     ++   + YD  +     RE
Sbjct: 70  EHVDQDTALFRLDTRRVEADLRAAQAAIERLQLELNEANREVEKAEDLYD--QTLIALRE 127

Query: 136 EQLLDFLGKYHSTC 149
            +L        +  
Sbjct: 128 VELARIQQATVAAR 141


>gi|78049644|ref|YP_365819.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78038074|emb|CAJ25819.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 414

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 50/126 (39%), Gaps = 3/126 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +    +  + +  +G +++  +E G ++ QG  + T + ++      L    +   R  +
Sbjct: 79  VVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDADAQRSLSASQLSAARSQV 138

Query: 111 DTEKSALDFLNNKYDVLEKAFESR---EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           D  ++ L   N     L+    ++     Q    + +  +  +++ N   +    S ++ 
Sbjct: 139 DNMQAQLAVANADATRLQSLVGAQLVSRSQYDQAIAQRDALRAQLQNAQRNVQVASDQLA 198

Query: 168 LTRMRS 173
           +  +RS
Sbjct: 199 IAGIRS 204



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 80/271 (29%), Gaps = 36/271 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V    +++V   +  K+  +      R++     + L  L +  Q+ L+  +    +   
Sbjct: 79  VVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDADAQRSLSASQLSAAR--- 135

Query: 212 SQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           SQ D  Q +  V  +    L+  +  Q       ++   + +         +   L+  Q
Sbjct: 136 SQVDNMQAQLAVANADATRLQSLVGAQLVSRSQYDQAIAQRDA--------LRAQLQNAQ 187

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--------LMKIV 322
           R       +L I     +   + +P AG +V  ++                    +  IV
Sbjct: 188 RNVQVASDQLAIAGIRSDFNVVRAPFAG-VVTAKAAQPGEIVSPLSAGGGFTRTGIGTIV 246

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              +   I  +V    I  V+           Y + +       +  I P   +      
Sbjct: 247 -DMESLEIEVEVGESYIGRVQPKMPVEAVLNAYPEWK---IPGEVIAIIPTADRGKAT-- 300

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                 V +++   A    +  +       V
Sbjct: 301 ------VKVRV---ALKVKDPRIVPEMGVRV 322


>gi|295697634|ref|YP_003590872.1| secretion protein HlyD family protein [Bacillus tusciae DSM 2912]
 gi|295413236|gb|ADG07728.1| secretion protein HlyD family protein [Bacillus tusciae DSM 2912]
          Length = 212

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 10/130 (7%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +PI+G+I+ +   +        QPL  +    K  YI A +   +I  V  G    V 
Sbjct: 86  ITAPISGSIIQSNV-ADGQIVSPGQPLATMA-DMKKLYILANIEETRIADVNIGADVDVT 143

Query: 352 FPHYADIREKKFKAIIEKID----PIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELR 406
                       K  ++++      + S       T  Y  V+ +I   ++ S  + ++ 
Sbjct: 144 VDADPGTT---IKGRVDQVGLAANSVFSLFPQQNTTGNYTRVVQRIPVKISMSAYDQDIV 200

Query: 407 NGFPAEVLFT 416
            G  A V   
Sbjct: 201 PGMNATVRIH 210



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 18/75 (24%)

Query: 33  TWSILLPIEISVSSS------------------GEILNEDNVVEIKSPFSGIIKKFQVEN 74
            W+ L+P+  +V                     G+I    +   I +P SG I +  V +
Sbjct: 42  VWADLVPVSPAVPGRLSGWKGTVGQTFNQGDTIGQIDGAGDAGRITAPISGSIIQSNVAD 101

Query: 75  GSQILQGTPLLTFED 89
           G  +  G PL T  D
Sbjct: 102 GQIVSPGQPLATMAD 116


>gi|289679457|ref|ZP_06500347.1| secretion protein HlyD [Pseudomonas syringae pv. syringae FF5]
          Length = 305

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/317 (11%), Positives = 92/317 (29%), Gaps = 76/317 (23%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PIE + ++      +     I    SG + +  V++   +  G  L+  +D        
Sbjct: 64  SPIESTENAQ----VKGQTTLIGPQLSGYVYEVPVQDFQFVKAGDLLVRLDD-------R 112

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + +  +      +  +K++L     +    E     R+ +L + + +   + +       
Sbjct: 113 IYRQRLDQAIAQLAVQKASLANNLQQRRSAEATIGQRQAELQNSIAQSRKSAA------- 165

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                                                   DL   + L    +VS+++L 
Sbjct: 166 ----------------------------------------DLRRNQALVTDGSVSKSEL- 184

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                V ++          +   +  I              L+ +  +    + + A+  
Sbjct: 185 ----DVTRAADAQANAAVAEARAVLQIA----------REDLQTVIVNRGSLEASVANAQ 230

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + + +     +   I++P  G +          Y      LM +VP  +     A +   
Sbjct: 231 AAIELARIDLDNTRIVAPRDGQLGQIGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKET 287

Query: 338 QIQHVKKGYTATVRFPH 354
           Q+ +V+ G   +     
Sbjct: 288 QMANVRLGQPVSFTVDA 304


>gi|163850007|ref|YP_001638050.1| secretion protein HlyD family protein [Methylobacterium extorquens
           PA1]
 gi|163661612|gb|ABY28979.1| secretion protein HlyD family protein [Methylobacterium extorquens
           PA1]
          Length = 343

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 74/224 (33%), Gaps = 24/224 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWS---ILLPI---------------EISVSSSGEI 50
           ++R  P    R  LL+I+   G    +                       +    S+G I
Sbjct: 1   MRRTRPGPRARGALLAILLATGFAVAAPPPSFAQSRLKQLIDRLRGQKMPDGIAKSNGRI 60

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
                 V++ + ++G I K  V+ G ++  G  + T    ET   +   +  +   +  +
Sbjct: 61  EATQ--VDVAAKYAGRIAKLLVKEGDEVSAGQVVATISSPETEAQLRGAQSQVLRAKKSL 118

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLL---DFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             E  AL    N       A  +R ++L+       +             +++  +   +
Sbjct: 119 -AEAVALIAQRNSDLTFADADYNRGKELVGKGYMAKQIFDQRKAKAEAAKAALDAAKAQE 177

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                ++     D++   ++L  L+    +D  +   L  +  V
Sbjct: 178 DQAKFAVQSAEADVQRLEAMLVDLVLRAPRDGRVQYRLAREGEV 221


>gi|104784227|ref|YP_610725.1| membrane fusion protein [Pseudomonas entomophila L48]
 gi|95113214|emb|CAK17942.1| putative membrane fusion protein [Pseudomonas entomophila L48]
          Length = 319

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 90/309 (29%), Gaps = 27/309 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           KS  D L     +     ES E Q+     K     ++V       V R   +     R+
Sbjct: 27  KSLHDRLPEGLSMGNGRLESTEVQIA---SKVPGRLAEVLVDEGDKVSRGQLLARIDTRT 83

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +   R   E +        ++ Q               +   L Q E ++    L+    
Sbjct: 84  MEAQRAQAEAEVLRANENYAAAQ---------------ASVQLRQSELLLASQELKRVRE 128

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           I+++K   + + +            +      L   +       +++  L    +  ++ 
Sbjct: 129 IYQRKFASQQLLDQQQARYDTANAAVVAARAQLAAIKAAIGAAEAQVAQLTSEIDDSSLR 188

Query: 294 SPIAGTIVYNQSFSSSNYAQQ-SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +PI G I   +            + LM I P  +   +   +       +  G  A +  
Sbjct: 189 APIDGIIQ-LRLAEPGEVLGAGGRVLMLIDPSDQYMNL--YLPAATTGRLTVGDQARIVL 245

Query: 353 PHYADIREKKFKAIIEKIDPIISQQ--DNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
               +       A +        +Q    + + +  + V L++++ +        + G P
Sbjct: 246 DALPEKALPAKVAFVAAKAQFTPKQVETRDERQKLVFRVKLRLSEPSAVPQA---KPGMP 302

Query: 411 AEVLFTAKN 419
                   +
Sbjct: 303 GAGYVRTAD 311



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 49/161 (30%), Gaps = 2/161 (1%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E   V+I S   G + +  V+ G ++ +G  L   +           +  +     +   
Sbjct: 45  ESTEVQIASKVPGRLAEVLVDEGDKVSRGQLLARIDTRTMEAQRAQAEAEVLRANENYAA 104

Query: 113 EKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            ++++    ++  +  +  +   E  Q      +        ++   ++V  +       
Sbjct: 105 AQASVQLRQSELLLASQELKRVREIYQRKFASQQLLDQQQARYDTANAAVVAARAQLAAI 164

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             +I      +   +S +         D  +   L E   V
Sbjct: 165 KAAIGAAEAQVAQLTSEIDDSSLRAPIDGIIQLRLAEPGEV 205


>gi|77920499|ref|YP_358314.1| multidrug resistance efflux pump [Pelobacter carbinolicus DSM 2380]
 gi|77546582|gb|ABA90144.1| Multidrug resistance efflux pump [Pelobacter carbinolicus DSM 2380]
          Length = 299

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 71/232 (30%), Gaps = 31/232 (13%)

Query: 207 EKNAVSQNDLN---QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLK 260
           +   V + DL     QER               +  M+    E    A L     +N  +
Sbjct: 66  DNQLVHKGDLLFTIDQERYRLALAQTRARLAASKATMVMRSREFERRAQLGGKVISNENR 125

Query: 261 EISRDLEQNQRTF-ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           E SR           +  +   + E   ++  + +P+ G I         +Y     P +
Sbjct: 126 ENSRAQADAAEALYEEAQAACAVAELNLQRTEVRAPVDGYITNLAIH-PGDYVTAGTPKL 184

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +V      +I       +++ +++     +R        E      IE +   I+ +DN
Sbjct: 185 AVV-DKNSFWIYGYFEENKLRLLQREDPVEIRL----MSSETPLHGHIESLARGITDRDN 239

Query: 380 NLQTQ---------------EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              ++               +   V ++I ++      + L  G    V+  
Sbjct: 240 PTGSELLANVNPVFNWVRLAQRVPVRVRIDEV---PEEVPLAAGMTCTVIVK 288



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/147 (11%), Positives = 49/147 (33%), Gaps = 15/147 (10%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +++++ +  SGI+    V +   + +G  L T +        +  ++++   R  + 
Sbjct: 44  VRADIIKVAADVSGIVASMAVHDNQLVHKGDLLFTIDQ-------ERYRLALAQTRARLA 96

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             K+ +   + +++        R  QL   +    +  +       +            +
Sbjct: 97  ASKATMVMRSREFE--------RRAQLGGKVISNENRENSRAQADAAEALYEEAQAACAV 148

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKD 198
             + L R ++          L+ H  D
Sbjct: 149 AELNLQRTEVRAPVDGYITNLAIHPGD 175


>gi|51597733|ref|YP_071924.1| multidrug resistance protein MdtN [Yersinia pseudotuberculosis IP
           32953]
 gi|153949555|ref|YP_001399528.1| multidrug resistance protein MdtN [Yersinia pseudotuberculosis IP
           31758]
 gi|170022847|ref|YP_001719352.1| multidrug resistance protein MdtN [Yersinia pseudotuberculosis
           YPIII]
 gi|186896916|ref|YP_001874028.1| multidrug resistance protein MdtN [Yersinia pseudotuberculosis
           PB1/+]
 gi|51591015|emb|CAH22674.1| Possible membrane bound HlyD family secretion protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|152961050|gb|ABS48511.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pseudotuberculosis IP 31758]
 gi|169749381|gb|ACA66899.1| secretion protein HlyD family protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186699942|gb|ACC90571.1| secretion protein HlyD family protein [Yersinia pseudotuberculosis
           PB1/+]
          Length = 349

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 93/288 (32%), Gaps = 26/288 (9%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                L   +    S++       +V E +   R + L       +    +     +   
Sbjct: 42  SEDAELGASVVHIASSVPGRIISINVEENSKVRRGDLLFSIEPDLYRLQVEQAQAELKMA 101

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +   +   + +   N      +    +A L    + L  ++ L  K  V+   ++   
Sbjct: 102 EAAHDTQQRTVVAERSNAAITNEQIVRAQANLKLATQTLARLQPLRPKGYVTAQQVDDAA 161

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
              + + + L++ + +       ++       L  A                     + L
Sbjct: 162 TAKHDAEVSLKQALKQSVAAEALVSSTASSEALVVA-------------------RRAAL 202

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            I E+      I +P  G +V     S+  +    Q +  ++ +++  +  A     +++
Sbjct: 203 AIAERELANTQIHAPNDGRVVGLTV-SAGEFVAPDQAIFTLI-NTEHWHASAFFRETELK 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD--NNLQTQEY 386
           H+K G  ATV        R++  +  +E I   +S +D  N  +   Y
Sbjct: 261 HIKVGDCATVYVMA---DRQRAIQGRVEGIGWGVSSEDMLNIPRGLPY 305


>gi|329121371|ref|ZP_08249997.1| RND family efflux transporter MFP subunit [Dialister micraerophilus
           DSM 19965]
 gi|327469780|gb|EGF15246.1| RND family efflux transporter MFP subunit [Dialister micraerophilus
           DSM 19965]
          Length = 369

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 68/223 (30%), Gaps = 29/223 (13%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--- 260
            + EK   S   +   + +    + +  E  +  +  L      Y+ A    A + K   
Sbjct: 86  RIVEKYVSSGQHVTAGQPLFRIDSKDAEETANAAEGKLAAAKAQYNLAKTTLARFQKLHD 145

Query: 261 ----------EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                     +     E  Q       + +   E       + +  +G I  N  F    
Sbjct: 146 IDAISDMAMDQTRSQFELAQAQLDQAQAMVGRAENNLNLTVLTADRSGVI-GNTLFEVGQ 204

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
            A    P+  IV       +   +T KQ      G   TV F    D+       +I++I
Sbjct: 205 VAGPGMPVAIIV-DDSTKEVNISLTEKQYSKYSVGMPCTVTFWALPDV---VVHGVIKEI 260

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
               +           Y+  + +TD   +  N+ +  G  A+V
Sbjct: 261 AGTPNPSTGT------YDAKISLTD---APENVVI--GMTAQV 292



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 30/81 (37%)

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           P  G I +  V +G  +  G PL   +  +  +  +  +  +   +   +  K+ L    
Sbjct: 82  PVGGRIVEKYVSSGQHVTAGQPLFRIDSKDAEETANAAEGKLAAAKAQYNLAKTTLARFQ 141

Query: 122 NKYDVLEKAFESREEQLLDFL 142
             +D+   +  + ++    F 
Sbjct: 142 KLHDIDAISDMAMDQTRSQFE 162


>gi|304312567|ref|YP_003812165.1| HlyD family secretion protein [gamma proteobacterium HdN1]
 gi|301798300|emb|CBL46522.1| HlyD family secretion protein [gamma proteobacterium HdN1]
          Length = 379

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 57/140 (40%), Gaps = 3/140 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +E  V++ G++  + N V++ +  SG IKK   E G ++ QG  +   +       +D
Sbjct: 41  ATLEDVVTAQGKLEPK-NYVDVGAQVSGQIKKLYFEIGDRVQQGDLVAELDPRVYKAKVD 99

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                +K+L+  +  +++ +     +     K  +S  E       + + T  K     +
Sbjct: 100 ADLSGLKSLQAQLREQEAQVKLAELQLQRTRKLLKSGTE--TQNTLEQNETSLKAARARL 157

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
            S+   ++++   +     N
Sbjct: 158 DSISAQIEVQRFNLEGDQTN 177


>gi|269102065|ref|ZP_06154762.1| hypothetical HlyD family secretion protein [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268161963|gb|EEZ40459.1| hypothetical HlyD family secretion protein [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 369

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 92/272 (33%), Gaps = 32/272 (11%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
           F G  H+      +  + SV        +  +S+ L       ++  + + +++  K + 
Sbjct: 21  FQGTSHAAHKPAPSSRVISVTTGTVGSHSIAQSLSLIGKLQAEQAVTIASEVAAKVKSIE 80

Query: 201 MMKN-LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           +  N   +K A+    L Q E    K+     E +  + +  R +N+          +  
Sbjct: 81  VKPNTRVQKGAL----LLQLEDD--KARAAYNEALAYRNDESRKLNDFK-----RLISRG 129

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                +LE    +     ++L   +      +I +P  GT+     FS  +       L 
Sbjct: 130 AITQTELEAQTASVNIAEARLQAAKAHLSDLSIRAPFNGTV-GLYDFSIGHMVPMGGELF 188

Query: 320 KIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
                       +  +V  + +  ++ G   + +   + D     F   ++ ID  +   
Sbjct: 189 S---FDDLSSMRLDIQVPEQYLASLQPGMKVSAKSQAWPDRT---FSGTVQTIDSRVQAD 242

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
             N        V +++T   F +++  L+ G 
Sbjct: 243 SLN--------VKVRVT---FDNSDNALKPGM 263


>gi|255535456|ref|YP_003095827.1| Probable Co/Zn/Cd efflux system membrane fusion protein
           [Flavobacteriaceae bacterium 3519-10]
 gi|255341652|gb|ACU07765.1| Probable Co/Zn/Cd efflux system membrane fusion protein
           [Flavobacteriaceae bacterium 3519-10]
          Length = 351

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 51/167 (30%), Gaps = 8/167 (4%)

Query: 210 AVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            V +    +  + + +   E L  N+   +  L             +          L+Q
Sbjct: 86  YVKEGSYVRAGQSIGRLGGEKLNVNVGNAQANLSQAQSALSRYEAAYKTGGVTAL-QLDQ 144

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +    +  S++           I+S I+G +   +            P+++IV      
Sbjct: 145 ARLQVQNARSQVQSANLQSGDTNIISKISGIVNQ-KMLEVGAVVNPGTPIVEIV-DISSV 202

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            ++  V    +  +  G T  V+     D+ E      I  I P  S
Sbjct: 203 KLKVDVDQALVSQLAVGNTVKVK----PDVVEGTIDGRITFIAPSAS 245



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 35/125 (28%), Gaps = 1/125 (0%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I    + +G  L       I +   G +    V+ GS +  G  +      +    +  
Sbjct: 55  EISGEFAVNGTFLPNRQSQ-ISAEIGGQLIALYVKEGSYVRAGQSIGRLGGEKLNVNVGN 113

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            + ++   +  +   ++A          L++A    +            +        IS
Sbjct: 114 AQANLSQAQSALSRYEAAYKTGGVTALQLDQARLQVQNARSQVQSANLQSGDTNIISKIS 173

Query: 159 SVYRS 163
            +   
Sbjct: 174 GIVNQ 178


>gi|240146265|ref|ZP_04744866.1| hypothetical protein ROSINTL182_08214 [Roseburia intestinalis
           L1-82]
 gi|257201625|gb|EEU99909.1| hypothetical protein ROSINTL182_08214 [Roseburia intestinalis
           L1-82]
          Length = 372

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/355 (10%), Positives = 112/355 (31%), Gaps = 44/355 (12%)

Query: 76  SQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             + +G  L    D        +  D I   + ++K    ++ + K + +      D+  
Sbjct: 1   DTVSKGDALFKLTDESMEAAKSDYEDAISDAENTLKTAEANLASGKLSAESTKQDADLTA 60

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +      +  +D L        + ++  +  +      +     + Y     ++ K   +
Sbjct: 61  QTAADSYQAQVDALDAAVEEKKEAYDEAVEQISE---YQTKIDNNDYYVECAIDEKKDAV 117

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A  ++  +    +    +    +Q+ L Q ++    +     +N+ E    +  + +  
Sbjct: 118 DAATTALAQAQDTLTQAQQSADAAQSTLEQAQKEFDSAVETYNKNVEETNTKITELTDSL 177

Query: 249 DEANLEFANYLKEISRDLEQNQRT------------------FADEMSKLTILEKTR--- 287
           D+   ++    ++ +    + Q                     ++  S +   + T    
Sbjct: 178 DDLKSDYEQAERDATMQKAELQNEYDTAVVEGKYAGSTYESTVSELESAVESAQDTLDTL 237

Query: 288 --EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK------IVPHSKLTYIRAKVTPKQI 339
             EQ  +L+   G +  ++  + +    +++  ++      +   ++   I  +V  + I
Sbjct: 238 KEEQTALLALENGVVTADEDGTIAAVPYEAEDTLQSGTAFALYCDTQTIMISVEVPQENI 297

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             V  G   +V        R+      +  I    S       +   Y VI+ I 
Sbjct: 298 AQVGVGDEVSVMIAG---NRDGAVTGTVSSIA--SSATTGGSVSNVTYAVIISID 347


>gi|255530575|ref|YP_003090947.1| RND family efflux transporter MFP subunit [Pedobacter heparinus DSM
           2366]
 gi|255343559|gb|ACU02885.1| efflux transporter, RND family, MFP subunit [Pedobacter heparinus
           DSM 2366]
          Length = 453

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 91/304 (29%), Gaps = 19/304 (6%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           EKA E +  + +   GK         +  +S     L +K   +  +   +L ++ +  +
Sbjct: 37  EKAAERKVVETVTASGKIQPETEVKLSSEVSGEVTELLVKEGDV--VKKGQLLVKVRPDV 94

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE- 246
           L++         +  K      A +Q  L Q +     +    + N+      +   +E 
Sbjct: 95  LKSGYDRAIASNSSQK---ASVAAAQQMLQQNQANFINAEATYKRNVELFNKKVISASEF 151

Query: 247 -LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                A L     L     D    +       + +        + TI +P+ G I     
Sbjct: 152 DAAKAAYLTAKTNLGRSKEDYTAAKFLLEQTGANVQEASANLAKATIFAPVDGVISKLSV 211

Query: 306 ----FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                           +M+I  +     +   V    I  VK G +A +    +AD + K
Sbjct: 212 ELGDRILGTIQNAGTEIMRIS-NLSSMEVNVDVNENDINRVKVGDSAAIEVDAFADKKFK 270

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL-------AFSDNNIELRNGFPAEVL 414
                I      +    + +     + V ++I             D     R G  A V 
Sbjct: 271 GVVTEIASSSKDVGSATSTVDQVTNFNVKVRILAESYSNITGGAKDLPSPFRPGLSATVD 330

Query: 415 FTAK 418
             ++
Sbjct: 331 IESE 334



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 88/267 (32%), Gaps = 8/267 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +  +V++SG+I  E  V  + S  SG + +  V+ G  + +G  L+         
Sbjct: 39  AAERKVVETVTASGKIQPETEVK-LSSEVSGEVTELLVKEGDVVKKGQLLVKVRPDVLKS 97

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKV 152
             D    S  + +  +   +  L      +   E  ++   E     +            
Sbjct: 98  GYDRAIASNSSQKASVAAAQQMLQQNQANFINAEATYKRNVELFNKKVISASEFDAAKAA 157

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN--- 209
           +    +++ RS +        +     +++  S+ L         D  + K   E     
Sbjct: 158 YLTAKTNLGRSKEDYTAAKFLLEQTGANVQEASANLAKATIFAPVDGVISKLSVELGDRI 217

Query: 210 -AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFANYLKEISRDLE 267
               QN   +  RI   S++E+  +++E       + +    E +       K +  ++ 
Sbjct: 218 LGTIQNAGTEIMRISNLSSMEVNVDVNENDINRVKVGDSAAIEVDAFADKKFKGVVTEIA 277

Query: 268 QNQRTFADEMSKLTILEKTREQKTILS 294
            + +      S +  +     +  IL+
Sbjct: 278 SSSKDVGSATSTVDQVTNFNVKVRILA 304


>gi|326665652|ref|XP_001920098.3| PREDICTED: myosin-9, partial [Danio rerio]
          Length = 1690

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 72/198 (36%), Gaps = 13/198 (6%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL--LDFLGKYHSTCS 150
                   + +I +L   +D E++A   L  +   +E   +  EE++  LD      S   
Sbjct: 938  QAEKKKMQQNIADLEQQLDEEEAARQKLQLEKVTMEAKLKKTEEEVMVLDDQNNKLSKEK 997

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            K+    I+    +L  +  + +S+   +   E   + L   L   +K    ++       
Sbjct: 998  KLMEERIAEFTTNLAEEEEKSKSLQKLKNKHEAMITDLEDRLRREEKQRQELEK------ 1051

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             ++  L      ++    EL+  I E K  L    E   EA        +E +      Q
Sbjct: 1052 -NRRKLEGDSTELHDQIAELQAQIAELKAQLAKKEEELQEALARI----EEEAAQKNLAQ 1106

Query: 271  RTFADEMSKLTILEKTRE 288
            +   +  S+L+ L++  E
Sbjct: 1107 KKIRELESQLSELQEDLE 1124



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 76/209 (36%), Gaps = 8/209 (3%)

Query: 86   TFEDIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
              ++ E     + L+KV+++      + E   LD  NNK    +K  E R  +    L +
Sbjct: 954  QLDEEEAARQKLQLEKVTMEAKLKKTEEEVMVLDDQNNKLSKEKKLMEERIAEFTTNLAE 1013

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 SK      +     +     R+R     R +LE     L    +     +     
Sbjct: 1014 -EEEKSKSLQKLKNKHEAMITDLEDRLRREEKQRQELEKNRRKLEGDSTELHDQIA---E 1069

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN--LEFANYLKEI 262
            L  + A  +  L ++E  + ++   + E   ++    + I EL  + +   E     +  
Sbjct: 1070 LQAQIAELKAQLAKKEEELQEALARIEEEAAQKNLAQKKIRELESQLSELQEDLELERAA 1129

Query: 263  SRDLEQNQRTFADEMSKL-TILEKTREQK 290
                E+++R   +E+  L T LE T +  
Sbjct: 1130 RTKAEKHRRDLGEELEALKTELEDTLDST 1158



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 80/214 (37%), Gaps = 20/214 (9%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL------LDFLGKYH 146
                   +   ++L   ++  K+ L+   +     ++    RE ++      L+   K H
Sbjct: 1127 RAARTKAEKHRRDLGEELEALKTELEDTLDSTAAQQELRTKRETEVAQLKKALEEDAKVH 1186

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                       S  +  L  +L +++    S+  ++  LE++ + L+  L +  +     
Sbjct: 1187 EQVMAEIRQKHSQAFDELNEQLEQVKRNKVSVEKSKQALESERNELQIELQTLMQGKGES 1246

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE-------- 254
            ++  +K      +L  +     +  +EL E + + +  L ++N L  +A  +        
Sbjct: 1247 EHRRKKAEAQLQELQVKHTESERQRIELAERLTKMQAELDNVNTLLSDAEGKSIKASKDC 1306

Query: 255  --FANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
                + L+++   L++  R      ++L  LE  
Sbjct: 1307 STVESQLQDVQEVLQEETRQKLALNTRLRQLEDE 1340



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 77/246 (31%), Gaps = 25/246 (10%)

Query: 74   NGSQILQGTPLLTFED--IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G        +   +    E    +  K+  ++     I+ E +  +    K   LE   
Sbjct: 1057 EGDSTELHDQIAELQAQIAELKAQLAKKEEELQEALARIEEEAAQKNLAQKKIRELESQL 1116

Query: 132  ESREEQLLDFLGKY--HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               +E L              +     + ++   L+  L    +    R   E + + L+
Sbjct: 1117 SELQEDLELERAARTKAEKHRRDLGEELEALKTELEDTLDSTAAQQELRTKRETEVAQLK 1176

Query: 190  ALLSSHQK-DLTMMKNLFEKNAVSQNDLNQQERIV-------YKSTLELRENIHEQKNML 241
              L    K    +M  + +K++ + ++LN+Q   V        KS   L    +E +  L
Sbjct: 1177 KALEEDAKVHEQVMAEIRQKHSQAFDELNEQLEQVKRNKVSVEKSKQALESERNELQIEL 1236

Query: 242  RHINELYDEANLEFANYLKEISR-------------DLEQNQRTFADEMSKLTILEKTRE 288
            + + +   E+         ++               +L +       E+  +  L    E
Sbjct: 1237 QTLMQGKGESEHRRKKAEAQLQELQVKHTESERQRIELAERLTKMQAELDNVNTLLSDAE 1296

Query: 289  QKTILS 294
             K+I +
Sbjct: 1297 GKSIKA 1302



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 64/181 (35%), Gaps = 3/181 (1%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            LL  E  +     D    S+ +L       +  L+ +  + + LE   ++ E+  L    
Sbjct: 1504 LLRAEMEDLVSSKDDVGKSVHDLEKSKRAMEQQLEEMKTQLEELEDELQATEDAKLRLEV 1563

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               +  ++             + K   ++ +    ++LE++       +++ +K    +K
Sbjct: 1564 NMQAMKAQYERDLQGRDELGEEKKRQLLKQVREMEMELEDERKQRTLAMAARKKMELDLK 1623

Query: 204  NL---FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             L    ++   ++++  +Q + V     +L   + + +     I     E   +  +   
Sbjct: 1624 ELEAAIDQANKNRDEALKQLKKVQAQMKDLLRELEDTRLSREEILAQSKENEKKVKSMEA 1683

Query: 261  E 261
            E
Sbjct: 1684 E 1684


>gi|326801995|ref|YP_004319814.1| efflux transporter RND family, MFP subunit [Sphingobacterium sp.
           21]
 gi|326552759|gb|ADZ81144.1| efflux transporter, RND family, MFP subunit [Sphingobacterium sp.
           21]
          Length = 347

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 9/96 (9%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G++ K  V+ G  +  G  L T    E    +          +  +  EK+  DF   +
Sbjct: 68  GGVVSKIYVKEGDAVQTGQLLATLNPTEVAASVG---------QAKLSEEKAQRDFQRAQ 118

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
               +      + Q  +   +      +  NY  + 
Sbjct: 119 ALFKDSVATLEQLQNAETALRIAQEQLRAANYNRNQ 154



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 69/218 (31%), Gaps = 22/218 (10%)

Query: 209 NAVSQNDLNQQERIVYKSTL------ELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             VS+  + + + +     L      E+  ++ + K         +  A   F + +   
Sbjct: 69  GVVSKIYVKEGDAVQTGQLLATLNPTEVAASVGQAKLSEEKAQRDFQRAQALFKDSVA-T 127

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              L+  +        +L      R Q  I +  AG ++  +  +         P++++ 
Sbjct: 128 LEQLQNAETALRIAQEQLRAANYNRNQTEIRAASAGYVLK-RFVNDGQVVGPGSPVLQLN 186

Query: 323 PH-SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                   ++  V+ +Q   +  G +A +      +          E IDP         
Sbjct: 187 RTGGSDWQLKVGVSDQQWSRIAVGDSAIISSEVLGNKVAALVYKKSEGIDPAS------- 239

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                + ++LK+      D   ++  G  A+ +   K 
Sbjct: 240 ---GVFTIMLKL---LPGDYGKKIGTGMFAQAVIQTKE 271


>gi|322385816|ref|ZP_08059459.1| efflux transporter [Streptococcus cristatus ATCC 51100]
 gi|321270101|gb|EFX53018.1| efflux transporter [Streptococcus cristatus ATCC 51100]
          Length = 383

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 96/279 (34%), Gaps = 19/279 (6%)

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               + +          S  +    + +     +  +     L ++L +    + + + L
Sbjct: 38  PKEVAPIVQQAKEGSIASSVLLTGTVTANSEQYVYYDATKGDLESVLVNVGDQVAVGQAL 97

Query: 206 FE-KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            + K+  +Q + +   R V K+  ++ +       + +  +E  D  +L  A+  + +  
Sbjct: 98  VQYKSTEAQANYDAAVRAVNKADRQINDLQTNGATVEKTGDEETDSKSL--ASAQRTVDS 155

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L   +   +D +  +   +      T+ S + GT+V      S +    +Q L+ IV  
Sbjct: 156 QLADLRDARSDAVDNMNKAQALLNAATVTSTVEGTVVEVNRDVSKSTTGTNQTLVHIV-S 214

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------PIISQQ 377
           +    I+ +++   + ++  G   T+    Y D   KK+   I  I           S  
Sbjct: 215 NGSLQIKGELSEYNLANLSVGQEVTITSKVYPD---KKWTGKISYISNYPKDGQQASSTN 271

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                +   Y   + IT         +L+ GF   V   
Sbjct: 272 TGGAASSAKYPFTVDITSEI-----GDLKQGFSVSVEVK 305



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 7/129 (5%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV  +G +              G ++   V  G Q+  G  L+ ++  E     D  
Sbjct: 53  IASSVLLTGTVTANSEQYVYYDATKGDLESVLVNVGDQVAVGQALVQYKSTEAQANYD-- 110

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE-EQLLDFLGKYHSTCSKVFNYGIS 158
                 +R     ++   D   N   V +   E  + + L        S  + + +    
Sbjct: 111 ----AAVRAVNKADRQINDLQTNGATVEKTGDEETDSKSLASAQRTVDSQLADLRDARSD 166

Query: 159 SVYRSLKMK 167
           +V    K +
Sbjct: 167 AVDNMNKAQ 175


>gi|307129752|ref|YP_003881768.1| putative RND efflux membrane fusion protein [Dickeya dadantii 3937]
 gi|306527281|gb|ADM97211.1| Probable RND efflux membrane fusion protein [Dickeya dadantii 3937]
          Length = 430

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/336 (12%), Positives = 95/336 (28%), Gaps = 31/336 (9%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +     +   ++ +        T   +  F     DVL    +  E              
Sbjct: 47  LRVEPQVLENRLGLTGRIQAAATLTLSAPFDGMIKDVLVNEGQRVEAGQPLLTLDTGLLD 106

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            ++       +     ++  +               +  R  L + + +L   + LFE+ 
Sbjct: 107 IQLRQALADLLKAQRTVQDMQHWEQGQEVARARRTLNNARISLVNTEANLKDTRTLFERG 166

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V++ +++   +      L+L     E +  L        +                   
Sbjct: 167 IVARMEVDALAQQAQAQRLDLSAAQEELQAALDRGRGENRQI-----------------A 209

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIV--------YNQSFSSSNYAQQSQPLMKI 321
           +   A+  S+   L   + Q+ + +P AG +V          Q       A Q  PL  +
Sbjct: 210 EMELANAQSRHQTLMAMQAQQVVRAPFAGVLVRPAAPETDKRQPLQPGIRASQGMPLFGL 269

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           + +     + A +    +  + +G    +    +A +        I+ I       D   
Sbjct: 270 I-NPDQLQVIASLEEADLHQLHEGMPVDISGDGFAGLT---LSGHIQTIGSEGRAADVAG 325

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +  Y  ++   T  A     + L  G  A +    
Sbjct: 326 ASARYDVLVTIATPPAEQRQRLRL--GMSARLSVVT 359



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 74/226 (32%), Gaps = 33/226 (14%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE--------IKS- 61
           R  P   +   ++++      + W++  P   ++  +  +  E  V+E        I++ 
Sbjct: 8   RQRPLRQRAALMIALALGTAAMVWTLWPPATDAMPQTQWLRVEPQVLENRLGLTGRIQAA 67

Query: 62  -------PFSGIIKKFQVENGSQILQGTPLLT-----------------FEDIETTDLID 97
                  PF G+IK   V  G ++  G PLLT                  +   T   + 
Sbjct: 68  ATLTLSAPFDGMIKDVLVNEGQRVEAGQPLLTLDTGLLDIQLRQALADLLKAQRTVQDMQ 127

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +   +  R       + +  +N + ++ +         +        +  ++     +
Sbjct: 128 HWEQGQEVARARRTLNNARISLVNTEANLKDTRTLFERGIVARMEVDALAQQAQAQRLDL 187

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           S+    L+  L R R       ++E  ++  R       +   +++
Sbjct: 188 SAAQEELQAALDRGRGENRQIAEMELANAQSRHQTLMAMQAQQVVR 233


>gi|58580039|ref|YP_199055.1| membrane-fusion protein [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58424633|gb|AAW73670.1| membrane-fusion protein [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 156

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 47/147 (31%), Gaps = 6/147 (4%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            EK  +++  L QQ+       ++ +  + E +     +   + +  L+       +   
Sbjct: 4   AEKGILTKVQLLQQQ----DIAIQNQGQLEELQKHALDLRVEHSQLQLQLEQTPATLEAK 59

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
                R  AD    L+     R    + +P  G +      +        QPL+ ++   
Sbjct: 60  RNDIARQIADVAQSLSETGARRS-VVLRAPTDGMVTNLLVHA-GQPVGAQQPLITLLSKD 117

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRF 352
                   V  K +  V  G    +R+
Sbjct: 118 IALRAELWVPSKAVGFVTCGDRVLLRY 144


>gi|16262806|ref|NP_435599.1| HlyD-family protein [Sinorhizobium meliloti 1021]
 gi|14523440|gb|AAK65011.1| HlyD-family protein [Sinorhizobium meliloti 1021]
          Length = 409

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 58/164 (35%), Gaps = 1/164 (0%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +      V I    +G + +  V+   ++  G PL   +D E    ++  +  +  +   
Sbjct: 68  VTAVFRTVTIMPESTGRVAEVYVDLNEKVSAGAPLFRLDDSEQRAALETARRRVAEIEAE 127

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
               +S L   +      E  +     +L   +       + V    I  +  ++  +  
Sbjct: 128 AIVAQSELASADGLIAQAEGDYLQALNELETQVELNQRNPNIVARREIERLQVAVDGRDG 187

Query: 170 RMRSIYLNRLDLENK-SSLLRALLSSHQKDLTMMKNLFEKNAVS 212
              +   N+  LE K +SLL A  +S +  LT  +   +K  V 
Sbjct: 188 ARAASISNKRTLETKIASLLPAQKASAEAALTQAQVELDKTIVR 231



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/202 (10%), Positives = 62/202 (30%), Gaps = 31/202 (15%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +   +      R  ++   L +  S  + +F    S    +L+    R+  I    +  
Sbjct: 72  FRTVTIMPESTGRVAEVYVDLNEKVSAGAPLFRLDDSEQRAALETARRRVAEIEAEAIVA 131

Query: 182 ENKSSLLRALLSSHQ-------KDLTMMKNLFEKN--AVSQNDLNQQERIVYKSTLELRE 232
           +++ +    L++  +        +L     L ++N   V++ ++ + +  V         
Sbjct: 132 QSELASADGLIAQAEGDYLQALNELETQVELNQRNPNIVARREIERLQVAVDGRDGARAA 191

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +I  ++ +   I  L                          A   + LT  +   ++  +
Sbjct: 192 SISNKRTLETKIASLLP---------------------AQKASAEAALTQAQVELDKTIV 230

Query: 293 LSPIAGTIVYNQSFSSSNYAQQ 314
            +  AG +      +  +    
Sbjct: 231 RAGTAGVVQQFALRA-GDIVNP 251


>gi|46202044|ref|ZP_00053871.2| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 324

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 61/189 (32%), Gaps = 18/189 (9%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E    I E +    +  E    +        +      ++ +  F    + +    + R 
Sbjct: 83  EASARIAELEAKAAYWREEMTRSAALTERGYRSTEAT-QKARSEFNQVTAAINAARQKRT 141

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              + SP+ G ++  +       A+    L   V   +   I ++V  + I  V+ G   
Sbjct: 142 DLLVTSPMDGMVLK-RDGEIGELAEVKDALFW-VGAPRPLRITSEVDEEDIARVRIGQKV 199

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            ++   +A+      +A +++I P     +        + V + + D      +  L  G
Sbjct: 200 LIKADAFAER---VLEAQVDRITPKGDPVNKT------FRVRVVLPD------DTPLLVG 244

Query: 409 FPAEVLFTA 417
              E+    
Sbjct: 245 MTTEINIIT 253



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 47/167 (28%), Gaps = 12/167 (7%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISV-----------SSSGEILNEDNVVEIKSPFSGII 67
            + LL++    G   W I  P   +V            ++G +  E     I     G I
Sbjct: 1   MLILLALAAGGGWWWWRITAPEVEAVFPKRGTAVEAIYATGTVEAEKWAR-IAPVSPGRI 59

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +     G  +  G PL   +D E +  I   +      R  +    +  +      +  
Sbjct: 60  AEILAFEGDMVKAGQPLARLDDREASARIAELEAKAAYWREEMTRSAALTERGYRSTEAT 119

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +KA     +               +    +  +      ++  +  +
Sbjct: 120 QKARSEFNQVTAAINAARQKRTDLLVTSPMDGMVLKRDGEIGELAEV 166


>gi|320179934|gb|EFW54876.1| Multidrug resistance protein A [Shigella boydii ATCC 9905]
          Length = 367

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 55/155 (35%), Gaps = 11/155 (7%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI-------KNLRCHID 111
           I    +GI+ +   +N   I +G  L   + +     +D  +  +       K LR  + 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 112 TEKSALDFLNNKYDVL----EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++    ++ + D L    ++  +  +  +  F  +      + F    + V  S+  +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                 +       +++   LRA L+  + +L   
Sbjct: 186 AQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQT 220



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 71/219 (32%), Gaps = 6/219 (2%)

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
               Q+   + +     +++   G             R+  +  + +   +    LRA L
Sbjct: 65  PITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQL 124

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +  Q + T +    ++   +     +  +       E   +I + +      + L   + 
Sbjct: 125 TEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSE--RDIDDARQNFLAQDALVKGSV 182

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            E A    ++   +   Q       ++LT  +   EQ  I +P  G +          YA
Sbjct: 183 AEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIR-PGTYA 241

Query: 313 Q--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
                +P+M  +P  K   + A+     +  +K G  A 
Sbjct: 242 AALPLRPVMVFIPEQKRQIV-AQFRQNSLLRLKPGDDAE 279


>gi|311267322|ref|XP_003131529.1| PREDICTED: LOW QUALITY PROTEIN: keratin, type I cytoskeletal
           39-like [Sus scrofa]
          Length = 490

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 90/212 (42%), Gaps = 13/212 (6%)

Query: 86  TFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
             ++ +   D +  K  +  +LR  ++ + + L  + N   + E   E++   L + L  
Sbjct: 170 QIDNTKLAADDLRAKYEAEVSLRQLVEADANGLRQILNALTLGEADLEAQVRSLKEELLC 229

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM--- 201
             S   +  +   S +   L +++T   SI LNR+ L+       +++ ++++D+     
Sbjct: 230 LKSNHEEEISSLQSQLGERLSIEVTAAPSIDLNRV-LQEMRCQYESVVETNRRDVEQWFC 288

Query: 202 --MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             M++L ++ A S       ++      +ELR  ++  +N L+ ++ + D      A   
Sbjct: 289 TQMEDLNQQVATS------TQQQQCCXIIELRSTVNALENELQALHRMRDSQEWALAETE 342

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +  L Q QR   +  ++L  +    E++ 
Sbjct: 343 ARYAALLAQIQRLIDNLEAQLAEIRGALERQN 374


>gi|301756048|ref|XP_002913842.1| PREDICTED: intersectin-2-like isoform 2 [Ailuropoda melanoleuca]
          Length = 1673

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 83/218 (38%), Gaps = 15/218 (6%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           L  +              ++++R    T+K+ L+ L+ + D+     +  +++L D+  K
Sbjct: 493 LHLDLEALNGKHQQISGRLQDVRLRKQTQKTELEVLDKQCDLEIMEIKQLQQELQDYQNK 552

Query: 145 --YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL--- 199
             Y     ++ N  I ++       L  +  ++   L+ E     L+  L + +K+    
Sbjct: 553 LIYLVPEKQLLNERIKNMQLGNTPDL-GIGLLHKKSLEKEELCQRLKEQLDALEKETASK 611

Query: 200 --------TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                     +K L E     Q  L Q  +I      E+     E     +  +E   +A
Sbjct: 612 LSEMDSFNNQLKELRESYNTQQLALEQLHKIKRDKLKEIERKRSELIQKKKLEDEALRKA 671

Query: 252 NLEFANYLKE-ISRDLEQNQRTFADEMSKLTILEKTRE 288
                N  +E + ++ E+ Q+   +E ++  + E+ R+
Sbjct: 672 KQGKENLWRESLRKEEEEKQKRLQEEKTQEKVQEEERK 709



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 43/150 (28%), Gaps = 4/150 (2%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
              +        F     + Y    ++L + R   + +   E +    +      +K   
Sbjct: 353 QEEEPQKKLPVTFEDKRKANYERGNVELEKRRQALMEQQQREAERKAQKEKEEWERKQRE 412

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN-YL 259
           + +  ++K    +  L   E+          E   E +       EL  +  LE+     
Sbjct: 413 LQEQEWKKQLELEKRL---EKQRELERQREEERRKEIERREAAKQELERQRRLEWERIRR 469

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +E+     + Q       SK   L    E 
Sbjct: 470 QELLNQRNREQEEIVRLNSKKKSLHLDLEA 499



 Score = 37.3 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 59/189 (31%), Gaps = 23/189 (12%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D     Y+      E R + L++   +     ++          R L          +  
Sbjct: 367 DKRKANYERGNVELEKRRQALMEQQQREAERKAQKEKEEWERKQREL------QEQEWKK 420

Query: 178 RLDLENKSS--------------LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +L+LE +                       + +++L   + L E   + + +L  Q    
Sbjct: 421 QLELEKRLEKQRELERQREEERRKEIERREAAKQELERQRRL-EWERIRRQELLNQRNRE 479

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +  + L          L  +N  + + +    +    + +  ++ +    D+   L I+
Sbjct: 480 QEEIVRLNSKKKSLHLDLEALNGKHQQISGRLQDVR--LRKQTQKTELEVLDKQCDLEIM 537

Query: 284 EKTREQKTI 292
           E  + Q+ +
Sbjct: 538 EIKQLQQEL 546


>gi|271498851|ref|YP_003331876.1| secretion protein HlyD family protein [Dickeya dadantii Ech586]
 gi|270342406|gb|ACZ75171.1| secretion protein HlyD family protein [Dickeya dadantii Ech586]
          Length = 315

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/237 (11%), Positives = 65/237 (27%), Gaps = 12/237 (5%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q    Q            +  + E+K        L  +A       +++    L+  
Sbjct: 82  VIDQPRYQQALEEAQADVGYYQALVDEKKRESARRLHLGVQAMSR--EEIEQSGNALQTT 139

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   A   ++L   +    +  + +P  G +      +   +  +    + +V       
Sbjct: 140 QHQLAKAQAELEQAKLDLARTVVRAPSDGWVTNLHVHA-GEFITRGSTAVALVKKDSFYL 198

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD------NNLQT 383
           + A +   ++  V+ GY   +       I      +I   +    S  D       +   
Sbjct: 199 L-AYMEETKLAGVRPGYRVEITPLGSNQILFGSVDSIAAGVTNSSSSSDIKGLATVDSNL 257

Query: 384 QEYYEVILKITDLAFSDNNIELRN-GFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +           +       +L   G  A V       T     + P+     ++ E
Sbjct: 258 EWVRLAQRVPVKIRLDQQWGDLYPAGTTATV-VVTGEHTRNTTPMSPLLQLLHRLRE 313



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/108 (12%), Positives = 37/108 (34%), Gaps = 2/108 (1%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
             +VV I    SG++ + +V++   + QG  L   +       ++  +  +   +  +D 
Sbjct: 49  SADVVAIAPDVSGLLTEVKVQDNQPVKQGDVLFVIDQPRYQQALEEAQADVGYYQALVDE 108

Query: 113 EKSALDFLNNK--YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           +K       +     +  +  E     L     +     +++    + 
Sbjct: 109 KKRESARRLHLGVQAMSREEIEQSGNALQTTQHQLAKAQAELEQAKLD 156


>gi|325981537|ref|YP_004293939.1| efflux transporter, RND family, MFP subunit [Nitrosomonas sp.
           AL212]
 gi|325531056|gb|ADZ25777.1| efflux transporter, RND family, MFP subunit [Nitrosomonas sp.
           AL212]
          Length = 381

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 67/207 (32%), Gaps = 14/207 (6%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + + +    K+ L   +            + L  E     +  L+ I ++ E  +   A 
Sbjct: 96  ILRAQLQQSKANLLNAQVALRIAESKLRRHRLLKEKEFISSEALEIIEQETEAARAQLAI 155

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAK 333
             +++   +       I SPI+G ++          A   Q   L +I    +   I   
Sbjct: 156 NKAQVERDQANLNYSVIRSPISGVVIARDVDIGQTVAANFQTPILFQIARDLRQMQINIS 215

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    I  +  G         +   +   F   ++++    + Q+N +     Y V+  +
Sbjct: 216 VAEADIGQLHIGQLINFTVDAFQQRK---FSGTVKQVRLNPTIQENVVT----YNVVAMV 268

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
                 +++  L  G  A + F  K  
Sbjct: 269 D-----NDDGTLLPGMTANIHFVVKQK 290



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 6/150 (4%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL---DFL 120
           SG + K   +   Q+  G  L   +       +   K ++ N +  +   +S L     L
Sbjct: 69  SGTVAKLHADFNDQVEIGQILAELDPAILRAQLQQSKANLLNAQVALRIAESKLRRHRLL 128

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS---SVYRSLKMKLTRMRSIYLN 177
             K  +  +A E  E++      +     ++V     +   SV RS    +   R + + 
Sbjct: 129 KEKEFISSEALEIIEQETEAARAQLAINKAQVERDQANLNYSVIRSPISGVVIARDVDIG 188

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           +    N  + +   ++   + + +  ++ E
Sbjct: 189 QTVAANFQTPILFQIARDLRQMQINISVAE 218


>gi|218551506|ref|YP_002385298.1| multidrug resistance protein MdtN [Escherichia fergusonii ATCC
           35469]
 gi|218359048|emb|CAQ91708.1| membrane fusion protein of efflux pump [Escherichia fergusonii ATCC
           35469]
          Length = 343

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 92/259 (35%), Gaps = 31/259 (11%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR----MRSIYLNRLDLENKS 185
               ++ QL+           + +   ++    SL     +     RS+   +L      
Sbjct: 61  ELAVKDNQLVKQGDLLFRIDPRPYEASLAKAQASLTALDKQIMLTQRSVEAQQLGAAAVK 120

Query: 186 SLLRALLSSHQKD---LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           + +   L+   +        ++L  +  VS  D+++       + ++    + + ++ + 
Sbjct: 121 TSVEKALAIVHQTSKTFQRTESLLAEGYVSDEDVDRARTAHRSAQVDYAALLLQAQSAVS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +                 +   + Q +   AD    + + +   E  T+ +P  G +V 
Sbjct: 181 GVGG---------------VDALVAQREAVLAD----IALTKLHLEMATVRAPFDGRVVS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A     ++ +++ G  ATVR         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETELNNIRAGTPATVRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  +
Sbjct: 277 FEGKVDSIGYGVLPDDGGM 295



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 45/135 (33%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + V++    SG I +  V++   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTVDVVPEVSGRIVELAVKDNQLVKQGDLLFRIDPRPYEASLAKAQASLTALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + +++        ++ + E     +      +  T S +    +S           R 
Sbjct: 104 LTQRSVEAQQLGAAAVKTSVEKALAIVHQTSKTFQRTESLLAEGYVSDEDVDRARTAHRS 163

Query: 172 RSIYLNRLDLENKSS 186
             +    L L+ +S+
Sbjct: 164 AQVDYAALLLQAQSA 178


>gi|304313246|ref|YP_003812844.1| Putative HlyD-like secretion protein [gamma proteobacterium HdN1]
 gi|301798979|emb|CBL47217.1| Putative HlyD-like secretion protein [gamma proteobacterium HdN1]
          Length = 378

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 82/256 (32%), Gaps = 17/256 (6%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQ 213
             + + Y  +    T + +I +    L+ K S    + +    +++     +    A + 
Sbjct: 31  QAMGAAYAQMAPPPTVVNAIAVQEQTLQEKISAPATITAIMGTEVSAEADGIVHSIAFTA 90

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            D  +Q   + +   EL +              L  E              DL+      
Sbjct: 91  GDHIRQGATLLQLDTELEQAQLRSAEAAAQSARLTLERARALRKSNSTSQADLDIATSNA 150

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +++       ++KTI +P +G  +  +  S      +  P++ +    +  Y+   
Sbjct: 151 DQARAQVDYYRTLIDKKTIRAPFSGK-LGLRQVSEGQLLMKGSPVVTLQALDE-VYVDFT 208

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +   ++  +  G T  VR   +       F   I  + P+I     +        V ++ 
Sbjct: 209 IPQNRLGQIVLGQTVQVRADAWPGQT---FTGTILAVSPVIDSVTRS--------VRIQA 257

Query: 394 TDLAFSDNNIELRNGF 409
           T    ++   +L  G 
Sbjct: 258 T---LANPKAQLLPGM 270



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 27/73 (36%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+       G  I QG  LL  +       +   + + ++ R  ++  ++     +   
Sbjct: 81  GIVHSIAFTAGDHIRQGATLLQLDTELEQAQLRSAEAAAQSARLTLERARALRKSNSTSQ 140

Query: 125 DVLEKAFESREEQ 137
             L+ A  + ++ 
Sbjct: 141 ADLDIATSNADQA 153


>gi|254719666|ref|ZP_05181477.1| efflux transporter, RND family, MFP subunit [Brucella sp. 83/13]
 gi|265984680|ref|ZP_06097415.1| efflux transporter [Brucella sp. 83/13]
 gi|306840058|ref|ZP_07472845.1| efflux transporter, RND family, MFP subunit [Brucella sp. NF 2653]
 gi|264663272|gb|EEZ33533.1| efflux transporter [Brucella sp. 83/13]
 gi|306404872|gb|EFM61164.1| efflux transporter, RND family, MFP subunit [Brucella sp. NF 2653]
          Length = 408

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 15/210 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q D  + + +   + L L++    ++  L     +      +    L     +++    
Sbjct: 127 AQLDNLKAQLLSKDAQLTLKKLNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNA 186

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
               + ++L   +      +I SP+ GT+V  Q+          Q    IV  + L    
Sbjct: 187 QIRQQEAQLASDKVDLGYTSIYSPMEGTVVD-QAAKEGETLNAVQSAPTIVTVADLKVMT 245

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A+V+   I  +K G      F        K+F   + +I P  +  +N +    YY +
Sbjct: 246 VEAQVSEADISKLKPGMPVY--FTLLGQPD-KRFTGTLRQIKPTPATDNNVVL---YYAL 299

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                     +   EL     A+V F    
Sbjct: 300 F------DVPNPTGELMIDMSAQVYFVLGE 323



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 68/192 (35%), Gaps = 29/192 (15%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITW-------------SILLP------IEISVSSSG 48
           + ++      +    LS   II    W             S L        IE ++++ G
Sbjct: 16  SARKRAKGKRRWWLWLSAAAIIIGAGWYFYGSYKADGEKSSYLAETVTRGDIENAITAVG 75

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
            + +    V + +  SG +K  +VE G  + QG  +   +       +++    + NL+ 
Sbjct: 76  TL-SALRSVNVGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIAGAQLDNLKA 134

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            + ++ + L         L+K   +R++ LL   G   +T  +  N  +      +K   
Sbjct: 135 QLLSKDAQL--------TLKKLNAARQKSLLATRGVSQATVDQA-NADLLMAEAEVKALN 185

Query: 169 TRMRSIYLNRLD 180
            ++R        
Sbjct: 186 AQIRQQEAQLAS 197


>gi|171315902|ref|ZP_02905131.1| efflux transporter, RND family, MFP subunit [Burkholderia ambifaria
           MEX-5]
 gi|171098905|gb|EDT43695.1| efflux transporter, RND family, MFP subunit [Burkholderia ambifaria
           MEX-5]
          Length = 331

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 72/226 (31%), Gaps = 27/226 (11%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q      ER+   +  + R  + + K   R         NL  +  ++E    +EQ 
Sbjct: 77  VIDQARYALAERLAEATLAQRRATLAQAK---REYARNLQLGNLVASEQVEESRTRVEQG 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   AD    L   +   ++ TI+SP+ G  + +++     Y    + ++ +V       
Sbjct: 134 EAAVADAQVSLDTAKLNLQRTTIVSPVDGY-LNDRAPRVGEYVPAGRAVLSVV-DRNSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----- 384
           +       +++ ++ G    +             +  ++ I   I  +D           
Sbjct: 192 VDGYFEETKLRGIQIGQPVDIVVMGEPH----PLRGHVQSIVAAIEDRDRTQGANLLPNV 247

Query: 385 ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                     +   V + + ++    ++  +  G  A V       
Sbjct: 248 NPAFSWVRLAQRVPVRVVLDEV---PDDFRMIAGRTATVAVRTDTR 290



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 41/118 (34%), Gaps = 6/118 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++    +G+I   QV +  ++ +G  L   +         L + ++   R  + 
Sbjct: 43  VRADVIQVAPDVAGLITAVQVADNQEVKRGQVLFVIDQARYALAERLAEATLAQRRATLA 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             K            L+       EQ+ +   +     + V +  +S     L ++ T
Sbjct: 103 QAKREYAR------NLQLGNLVASEQVEESRTRVEQGEAAVADAQVSLDTAKLNLQRT 154


>gi|323965981|gb|EGB61424.1| HlyD family protein secretion protein [Escherichia coli M863]
 gi|327251245|gb|EGE62938.1| hlyD family secretion family protein [Escherichia coli STEC_7v]
          Length = 378

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLASISPAV 301



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|321312878|ref|YP_004205165.1| putative ABC transporter protein [Bacillus subtilis BSn5]
 gi|320019152|gb|ADV94138.1| putative ABC transporter component [Bacillus subtilis BSn5]
          Length = 397

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 1/185 (0%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG++  E           G IKK  V+ G Q+ +G  L  +E  + +D ++   + I+  
Sbjct: 63  SGKVEPEKQQKVYIDSEKGSIKKTYVKEGDQVKKGDKLFEYEGEDHSDEVEQANLQIEMT 122

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              I+  + ++     K  V  K  +++ +  LD    +    S++           L  
Sbjct: 123 NLQINRLQKSITETEKKLKVAGKEEKNQLQDELD-QANFDLKTSQLELKQHQKELAGLTK 181

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                     +   +++ +  +    +  Q     ++ +     + ++ +N+      K 
Sbjct: 182 NKGSNVITSKHDGIVQSVNQDIADGATGDQATGPYIQIVSTGKYLVKSQINELLMDTIKK 241

Query: 227 TLELR 231
             ++R
Sbjct: 242 GSKVR 246



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 78/214 (36%), Gaps = 7/214 (3%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENI 234
             ++ ++++   ++         +     LFE +     +++ Q    +  + L++    
Sbjct: 71  QQKVYIDSEKGSIKKTYVKEGDQVKKGDKLFEYEGEDHSDEVEQANLQIEMTNLQINRLQ 130

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                  + +     E   +  + L + + DL+ +Q        +L  L K +    I S
Sbjct: 131 KSITETEKKLKVAGKEEKNQLQDELDQANFDLKTSQLELKQHQKELAGLTKNKGSNVITS 190

Query: 295 PIAGTIVY-NQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
              G +   NQ  +      Q + P ++IV  +    +++++    +  +KKG    V  
Sbjct: 191 KHDGIVQSVNQDIADGATGDQATGPYIQIV-STGKYLVKSQINELLMDTIKKGSKVRVTL 249

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
                  E ++K  +  I  + +      +++ +
Sbjct: 250 ---KTGGEGEWKGKVTSIGKLPAGAGEGEESESF 280


>gi|319639182|ref|ZP_07993933.1| MacA protein [Neisseria mucosa C102]
 gi|317399366|gb|EFV80036.1| MacA protein [Neisseria mucosa C102]
          Length = 393

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 77/195 (39%), Gaps = 14/195 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +   +     + ++ +
Sbjct: 43  IRQTVSATGEISPS-NLVSVGAEASGQIKKLYVKLGQQVKKGDLIAEIDSTNQLNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG--I 157
           K  ++  +  + + + AL     KY      ++ +     D      S  +   N     
Sbjct: 102 KSKLETYQAKLVSAEIALSSAEKKYKRELALWKEQATSKEDLESAQDSLAAAKANVAELK 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLD-----------LENKSSLLRALLSSHQKDLTMMKNLF 206
           +S+ +S     T    +   R+            +E   S+  A  +     L  ++ + 
Sbjct: 162 ASIKQSKISINTAESELGHTRITATMDGTVVAIPVEEGQSVNAAQSTPTIIQLANLETML 221

Query: 207 EKNAVSQNDLNQQER 221
            K  +++ D+ + + 
Sbjct: 222 NKMQIAEGDITKVKA 236



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 82/263 (31%), Gaps = 31/263 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A + S  +  T+           ++ L   +  
Sbjct: 60  SVGAEASGQIKKLYVKLGQQVKKGDLIAEIDSTNQLNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K  L          E      + L     ++ + + +       +
Sbjct: 112 LVSAEIALSSAEKKYKRELALWKEQATSKEDLESAQDSLAAAKANVAELKASIKQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPK 337
              E       I + + GT+V             +Q    ++++  + +    + ++   
Sbjct: 172 NTAESELGHTRITATMDGTVVAIPV-EEGQSVNAAQSTPTIIQLA-NLETMLNKMQIAEG 229

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--------YYEV 389
            I  VK G    + F   ++      KA ++ +DP ++       T          YY  
Sbjct: 230 DITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSLGSYTSSTDTTSNAIYYYA 286

Query: 390 ILKITDLAFSDNNIELRNGFPAE 412
              + +   SD  + +  G   +
Sbjct: 287 RALVPN---SDGKLSI--GMTTQ 304


>gi|312133710|ref|YP_004001049.1| saly-type abc antimicrobial peptide transport system permease
           component [Bifidobacterium longum subsp. longum BBMN68]
 gi|311772983|gb|ADQ02471.1| SalY-type ABC antimicrobial peptide transport system permease
           component [Bifidobacterium longum subsp. longum BBMN68]
          Length = 1232

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 75/225 (33%), Gaps = 26/225 (11%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E    ++  K  + + R  +D  ++ L     K +      +    Q+   L       +
Sbjct: 405 EARTQLESGKTQLTSARKQLDAAQTELTANRTKIEQGITQIDQGVAQIDQMLSMIQQADN 464

Query: 151 KVFN------------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH-QK 197
            +                I  +   L + L  + SI   R  L  K + L+    S  Q+
Sbjct: 465 LLAQLDPNIDFNSPTWQAIKQLLARLGITLPEVPSISELRQQLAAKQTELQTQRDSLTQQ 524

Query: 198 DLTMMKNLFEKNAVSQNDLNQQ-------ERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + + L E  A +Q+ L+QQ       E+       +L     E +     +     +
Sbjct: 525 KADLQRTLNETIAPAQSTLDQQNAQLTAKEQEAAAGEAQLNTKSAELEANAATLETQSAQ 584

Query: 251 ANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              + A        L+E  R L++ ++  AD  +KL   +   + 
Sbjct: 585 LEAQAAQLASGKRQLEEGERQLKEGEQQLADGKAKLDDAQSELDA 629


>gi|260884091|ref|ZP_05895705.1| secretion protein HlyD family protein [Brucella abortus bv. 9 str.
           C68]
 gi|260873619|gb|EEX80688.1| secretion protein HlyD family protein [Brucella abortus bv. 9 str.
           C68]
          Length = 391

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 71  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 128

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 129 AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 188


>gi|260770548|ref|ZP_05879481.1| HlyD family secretion protein [Vibrio furnissii CIP 102972]
 gi|260615886|gb|EEX41072.1| HlyD family secretion protein [Vibrio furnissii CIP 102972]
          Length = 291

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 61/208 (29%), Gaps = 17/208 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           +    V ++   +++         R        +N   A    +        Q +    +
Sbjct: 83  RLSSEVTQAKAMVKQAQATLHAADREYKRYQRLSNAVSAQQRDDKRDARILAQASLDKSL 142

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + L + E    +  I SP+ G I          +A    P+M +V      Y+       
Sbjct: 143 ADLELAEINLNRADIYSPVDGVITNFSLR-PGTFASAGVPVMALV-DQDSFYVSGYFEET 200

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKID------------PIISQQDNNLQTQE 385
           ++  ++ G  AT+             + +   I+              ++   + ++  +
Sbjct: 201 KLSRIRNGAVATIHVMGEHQPIYGHVEGLSAGINDSERTTASGTLLANVNPTFSWIRLAQ 260

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
              V +KI  +        L  G    V
Sbjct: 261 RIPVRIKIDTI---PKGFTLIAGRTVSV 285



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/152 (11%), Positives = 56/152 (36%), Gaps = 4/152 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSS-SGEILNEDNVVEIKSPFSGII 67
           +K    +S K +     + + G + W++      +  +  G+I  +  +V + +  SG +
Sbjct: 2   MKHKMMSSFKILITTGAVLLAGFVVWNLYSYYHYAPQTRDGKIRAD--IVPLATDISGNV 59

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDV 126
               V +   + +GT L + +    +  +   K  +K  +  +   ++    +      V
Sbjct: 60  DAVYVHDNQIVRKGTLLFSLDKQRLSSEVTQAKAMVKQAQATLHAADREYKRYQRLSNAV 119

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             +  + + +  +        + + +    I+
Sbjct: 120 SAQQRDDKRDARILAQASLDKSLADLELAEIN 151


>gi|115526655|ref|YP_783566.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           BisA53]
 gi|115520602|gb|ABJ08586.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           BisA53]
          Length = 356

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 46/147 (31%), Gaps = 9/147 (6%)

Query: 19  RMTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
              ++      G   W     + L P     S +G I   +  +  KSP  G I+   V 
Sbjct: 10  LAVIIVAAVGGGYFGWKRFGAASLPP--GIASGNGRIEAVEIDISTKSP--GRIRDILVA 65

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  L   +  +        +  ++     +DT KS ++    +          
Sbjct: 66  EGDFVTAGQVLARMDTDQMEAQRRQAEAQLRRATVSVDTAKSFVNQRQAERTAAVAVIAQ 125

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSV 160
           RE QL     +     + +    +S  
Sbjct: 126 REAQLDALERRLARAETLIKTSAVSQQ 152



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/294 (11%), Positives = 73/294 (24%), Gaps = 21/294 (7%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F +  + L            +     +     S+    + +      R       
Sbjct: 64  VAEGDFVTAGQVLARMDTDQMEAQRRQAEAQLRRATVSVDTAKSFVNQRQAERTAAVAVI 123

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +   A L + ++ L   + L + +AVSQ  L+                    +   R   
Sbjct: 124 AQREAQLDALERRLARAETLIKTSAVSQQVLDDDR---------------ANEAGARAAV 168

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                        +      +           + +  +       T+ SP  G + Y + 
Sbjct: 169 AAAKAQLAATEAAISAAQAQVIDAGAAVDAAQAAIESITVEINDATLKSPRDGRVQY-RV 227

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK---K 362
                       ++ +V      Y+   +   Q   V  G    +      +        
Sbjct: 228 AQPGEVLAGGGRVLNLVDLGD-VYMTFFLPTSQAGQVAIGAEVRLVLDALPNYVIPAKAT 286

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           F A + +  P   + +   Q   +  +   I          +++ G P      
Sbjct: 287 FVADVAQFTPKTVETEEERQKLMF-RIKAHIPPELLRKYIQQVKTGLPGMAYVR 339


>gi|327538351|gb|EGF25024.1| peptidase, M50 family [Rhodopirellula baltica WH47]
          Length = 736

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 54/169 (31%), Gaps = 9/169 (5%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
            P   +R + L I  +  L+   +  P+   V ++ ++          +  +G ++    
Sbjct: 440 APGKARRRSRLMIGMVAVLLLAILFTPLPHRVKATAKVQPIQQSKIF-ALTAGRLESI-A 497

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK-------SALDFLNNKYD 125
             G  +    PL+   D +TT  I+  +  I  L   +   +       +    L N   
Sbjct: 498 STGQLVRVNEPLVRLSDWKTTLQIERLEGEIAELEARLKGTRMSRIQSDAGTTTLANIPT 557

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +       REE L       H          I +V  +      R RS 
Sbjct: 558 IEFALQAKREELLTIQKESEHLEIRSPHAGQIVAVSANPITPWQRSRSQ 606



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 71/233 (30%), Gaps = 42/233 (18%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + S + AL +   + +     L   N      L+  +  +    LE    I E +  L+ 
Sbjct: 481 QQSKIFALTAGRLESIASTGQLVRVN-EPLVRLSDWKTTLQIERLE--GEIAELEARLKG 537

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                 +     ++       ++   +     +  +L  ++K  E   I SP AG IV  
Sbjct: 538 TRMSRIQ-----SDAGTTTLANIPTIEFALQAKREELLTIQKESEHLEIRSPHAGQIVAV 592

Query: 304 QSFSS----------------------SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
            +                           +     P+  +V  +    +   +   QI  
Sbjct: 593 SANPITPWQRSRSQIGWSGQPTETINRGAWISSGTPICNVV-SNDQHKVSVSIDASQIGW 651

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +++G +A      +       +   + ++    S+ D        YEV + + 
Sbjct: 652 IREGQSA---VTSFPSGTT--WTGNVTEVGTRPSENDGT------YEVTVALD 693


>gi|325927294|ref|ZP_08188548.1| RND family efflux transporter, MFP subunit [Xanthomonas perforans
           91-118]
 gi|325542295|gb|EGD13783.1| RND family efflux transporter, MFP subunit [Xanthomonas perforans
           91-118]
          Length = 414

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 50/126 (39%), Gaps = 3/126 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +    +  + +  +G +++  +E G ++ QG  + T + ++      L    +   R  +
Sbjct: 79  VVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDADAQRSLSASQLSAARSQV 138

Query: 111 DTEKSALDFLNNKYDVLEKAFESR---EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           D  ++ L   N     L+    ++     Q    + +  +  +++ N   +    S ++ 
Sbjct: 139 DNMQAQLAVANADATRLQSLVGAQLVSRSQYDQAIAQRDALRAQLQNAQRNVQVASDQLA 198

Query: 168 LTRMRS 173
           +  +RS
Sbjct: 199 IAGIRS 204



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 80/271 (29%), Gaps = 36/271 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V    +++V   +  K+  +      R++     + L  L +  Q+ L+  +    +   
Sbjct: 79  VVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDADAQRSLSASQLSAAR--- 135

Query: 212 SQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           SQ D  Q +  V  +    L+  +  Q       ++   + +         +   L+  Q
Sbjct: 136 SQVDNMQAQLAVANADATRLQSLVGAQLVSRSQYDQAIAQRDA--------LRAQLQNAQ 187

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--------LMKIV 322
           R       +L I     +   + +P AG +V  ++                    +  IV
Sbjct: 188 RNVQVASDQLAIAGIRSDFNVVRAPFAG-VVTAKAAQPGEIVSPLSAGGGFTRTGIGTIV 246

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              +   I  +V    I  V+           Y + +       +  I P   +      
Sbjct: 247 -DMESLEIEVEVGESYIGRVQPKMPVEAVLNAYPEWK---IPGEVIAIIPTADRGKAT-- 300

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                 V +++   A    +  +       V
Sbjct: 301 ------VKVRV---ALKVKDPRIVPEMGVRV 322


>gi|225181246|ref|ZP_03734691.1| efflux transporter, RND family, MFP subunit [Dethiobacter
           alkaliphilus AHT 1]
 gi|225168026|gb|EEG76832.1| efflux transporter, RND family, MFP subunit [Dethiobacter
           alkaliphilus AHT 1]
          Length = 405

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 87/277 (31%), Gaps = 41/277 (14%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLN--RLDLENKSSLLRALLSSHQKDLTMMKN 204
              ++     +     +++M    + S+        L+          +   + L  M+ 
Sbjct: 91  ELEARELALAVQQAEAAVEMARANLNSMEAGSGLSQLQANVRQAEINFNRAGEQLERMEA 150

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L+ +  +++  L                           + +   E   +     +    
Sbjct: 151 LYAEGGLAKQQLEDVRASFA-------------------VAQTQYELASDQLQSHERGEG 191

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS-SNYAQQSQPLMKIVP 323
            LE          + L +     +  TI +P+ GT+      +   N      P++ ++ 
Sbjct: 192 QLEILTAQLKQAEAGLELARLNYQNATITAPVGGTVT--LVHTEAGNMVSPGTPVVTLI- 248

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           +++ T + A +T + + H+  G    V  P      E +++  + +I P        +  
Sbjct: 249 NAEGTRVTALLTEQAVNHIAVGMEIAVEIP----TLEGRYQGEVREISP------GAVSG 298

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              + V + + +       IE R G  A ++    + 
Sbjct: 299 TRSFLVKVTLVEE------IEARPGMFARLILVRDSR 329



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 58/172 (33%), Gaps = 4/172 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    I  + S SGE+     +  +    SG + K  V  G  + QG  L+  E  E   
Sbjct: 41  AGQGEIAETFSFSGEVSAGGEIQIV-PKVSGTVSKVNVALGDTVQQGDVLVELEARELAL 99

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   + +++  R ++++ ++       + +V +               +       +  
Sbjct: 100 AVQQAEAAVEMARANLNSMEAGSGLSQLQANVRQAEINFNRAGEQLERMEALYAEGGLAK 159

Query: 155 YGISSVYRSLKMKLTRMR---SIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             +  V  S  +  T+         +    E +  +L A L   +  L + +
Sbjct: 160 QQLEDVRASFAVAQTQYELASDQLQSHERGEGQLEILTAQLKQAEAGLELAR 211


>gi|217975371|ref|YP_002360122.1| secretion protein HlyD family protein [Shewanella baltica OS223]
 gi|217500506|gb|ACK48699.1| secretion protein HlyD family protein [Shewanella baltica OS223]
          Length = 287

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 50/170 (29%), Gaps = 20/170 (11%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           I+ +L +     A   ++L   +    +  I +P  GT++     S  NY  +   +  +
Sbjct: 126 INTELARTSYELAQ--AQLNTAKIDLARTQIHAPENGTLINLSLRS-GNYVSKGNSVFSL 182

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V      YI       +I  V  G  A V                +  I   I+  +   
Sbjct: 183 VKQDS-LYITGYFEETKIPLVHIGQNADVSL----MSGGHVLHGKVTSIGKAIANTNVTT 237

Query: 382 QTQEYYEV-----------ILKIT-DLAFSDNNIELRNGFPAEVLFTAKN 419
             Q   ++            + +   L     +IEL  G    +      
Sbjct: 238 NGQLLPQIGQTFNWVRLSQRIPVDIQLDSIPKDIELSVGMTVSIQLQTDK 287



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 51/150 (34%), Gaps = 7/150 (4%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + ++++ GI G   WS    +    +  G +  E  ++ I    SG + +  V++   + 
Sbjct: 11  LIVVAVAGIAGHWIWSHY--LYSPWTRDGRVRAE--IITIAPDVSGWVNQLNVKDNQVVN 66

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREE 136
           +G  L T +D      I       ++ +   +  K        L N   V ++ F+    
Sbjct: 67  KGDVLFTVDDTRYKATIAELNAKAESQKLAWELAKHKYKRRIGLTNDNLVSKETFDEAFI 126

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                   Y    +++    I      +  
Sbjct: 127 NTELARTSYELAQAQLNTAKIDLARTQIHA 156


>gi|47228073|emb|CAF97702.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 750

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 68/213 (31%), Gaps = 5/213 (2%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           LT    +        +  + + R      +   +      +  EK+   +  ++   L +
Sbjct: 116 LTLLARKMASEGAFSRPGLHSERTEGQERQRITEHQQAMEEEREKSLALQRAEMERALER 175

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR-ALLSSHQKDLTMMK 203
                 +          R  + +L   R      L L  +      AL      +L   +
Sbjct: 176 ERIEKQQAIEKEEQEKARQRERELALERERQERELALVKEREEQELALARERALELERKR 235

Query: 204 NLFEKNAVSQNDLNQQE----RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            L  +    Q +L +QE    R + +  LE +  +  Q+ + R   E   E   +     
Sbjct: 236 ELERQELERQRELERQELERQRELERQELERQRELERQRELERQELERQRELERQKLEMQ 295

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           KE+ R  E  ++      ++    ++   ++ +
Sbjct: 296 KELERQRELERQELEKAAAREAKAQEQERERAL 328



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 62/199 (31%), Gaps = 1/199 (0%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                 +   +        E+     L  +   +E+A E    +    + K     ++  
Sbjct: 136 SERTEGQERQRITEHQQAMEEEREKSLALQRAEMERALERERIEKQQAIEKEEQEKARQR 195

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL-LRALLSSHQKDLTMMKNLFEKNAVS 212
              ++      + +L  ++      L L  + +L L       +++L   + L  +    
Sbjct: 196 ERELALERERQERELALVKEREEQELALARERALELERKRELERQELERQRELERQELER 255

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q +L +QE    +     RE   ++    R +     E   E     +   ++LE+    
Sbjct: 256 QRELERQELERQRELERQRELERQELERQRELERQKLEMQKELERQRELERQELEKAAAR 315

Query: 273 FADEMSKLTILEKTREQKT 291
            A    +       +E+  
Sbjct: 316 EAKAQEQERERALEQERLE 334


>gi|325123332|gb|ADY82855.1| HlyD family secretion protein [Acinetobacter calcoaceticus PHEA-2]
          Length = 369

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 81/213 (38%), Gaps = 13/213 (6%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           R       +  +   ++ + A +    +   ++  L  ++ V++    +      +S  E
Sbjct: 65  RAVQQSSIQAQVSATATNVTANVGQQVQKGQVLVRLNNQDNVARLAQARANLASAQSQAE 124

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L  N+  +K  L +   +   A +EF     +    LE  +   A+    + I +K  + 
Sbjct: 125 LARNLMNRKQRLFNQGFI---ARVEFEQSQVDYKGQLESVKAQQAN----VDIAKKADQD 177

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I SPI+G I+  Q           Q L +IV +     I+AK+  +Q   +K G    
Sbjct: 178 GIITSPISGVIIKRQV-EPGQTVSVGQTLFEIV-NPDQLEIQAKLPIEQQAALKIGSNIQ 235

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
            +         K+  A + +I P+  Q    ++
Sbjct: 236 YQI----QGNSKQLNATLTRISPVADQDSRQIE 264



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 20/212 (9%), Positives = 73/212 (34%), Gaps = 3/212 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++   + +G I        I++  S          G Q+ +G  L+   + +    +   
Sbjct: 54  LDSQTAFTGTIRAVQQS-SIQAQVSATATNVTANVGQQVQKGQVLVRLNNQDNVARLAQA 112

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++ + +   +  ++ ++     ++    A    E+  +D+ G+  S  ++  N  I+ 
Sbjct: 113 RANLASAQSQAELARNLMNRKQRLFNQGFIARVEFEQSQVDYKGQLESVKAQQANVDIAK 172

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAVSQNDLN 217
                 +  + +  + + R     ++  +   L    +   L +   L  +   +    +
Sbjct: 173 KADQDGIITSPISGVIIKRQVEPGQTVSVGQTLFEIVNPDQLEIQAKLPIEQQAALKIGS 232

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             +  +  ++ +L   +     +    +   +
Sbjct: 233 NIQYQIQGNSKQLNATLTRISPVADQDSRQIE 264


>gi|226953019|ref|ZP_03823483.1| RND family efflux transporter MFP subunit [Acinetobacter sp. ATCC
           27244]
 gi|226836226|gb|EEH68609.1| RND family efflux transporter MFP subunit [Acinetobacter sp. ATCC
           27244]
          Length = 396

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 60/155 (38%), Gaps = 6/155 (3%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            S  E +  + +    L+ + +L +   +      +  +      Q       +++   E
Sbjct: 130 ASYAEAQAVLADAAANLKRVQQLKNTGAISVQESAQYQTSQ-ATAQARLDAAKAQIESNE 188

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
               Q  ++SP  G I   +S +  + AQ  Q L +++        RA+VT   +  +++
Sbjct: 189 LRFTQTKVVSPDNGVI-SARSATVGSLAQTGQELFRLI-RDHRLEWRAEVTTTDLYKLRQ 246

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           G  A +  P   D  + K K  +  I P+I  Q  
Sbjct: 247 GMDAEIISP---DPTQPKIKGKVRMIAPVIDPQTR 278



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 61/205 (29%), Gaps = 4/205 (1%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +++G +     VV         + +  V  G Q+ +G  L           +   K S  
Sbjct: 74  TANGNVAAWQEVVIGSELSGQRLTRVNVNVGDQVKRGQVLAEINSDTIRADLAASKASYA 133

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +  +    + L  +      L+       ++   +     +  +++           L
Sbjct: 134 EAQAVLADAAANLKRVQQ----LKNTGAISVQESAQYQTSQATAQARLDAAKAQIESNEL 189

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           +   T++ S     +   + +    A        L     L  +  V+  DL +  + + 
Sbjct: 190 RFTQTKVVSPDNGVISARSATVGSLAQTGQELFRLIRDHRLEWRAEVTTTDLYKLRQGMD 249

Query: 225 KSTLELRENIHEQKNMLRHINELYD 249
              +       + K  +R I  + D
Sbjct: 250 AEIISPDPTQPKIKGKVRMIAPVID 274


>gi|148556132|ref|YP_001263714.1| secretion protein HlyD family protein [Sphingomonas wittichii RW1]
 gi|148501322|gb|ABQ69576.1| secretion protein HlyD family protein [Sphingomonas wittichii RW1]
          Length = 395

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 58/196 (29%), Gaps = 12/196 (6%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E +    + +R        A    A     +     +        ++ +      +    
Sbjct: 159 EEVAHAADSVRTAAAALTLARSRQAQARSTVEGTRVETNPDVLAAVAAVRRAAIVQGHMH 218

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           +++P+ G +V  ++           PLM +VP     +I A     QI  ++ G    +R
Sbjct: 219 LVAPLDG-VVAQRTVQLGQQVNPGTPLMAVVPLD-RLWIDANFRETQIAELRVGQPVEIR 276

Query: 352 FPHYADIRE--------KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
              Y                      + P  +   N ++  +   V + +       N +
Sbjct: 277 TDIYGGAVTYHGKLLGLGAGSGNAFALLPPQNASGNWIKIAQRVPVRIALDPAELRANPL 336

Query: 404 ELRNGFPAEVLFTAKN 419
            +  G  A+V     +
Sbjct: 337 RI--GVSAKVTVDTSD 350



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/179 (11%), Positives = 54/179 (30%), Gaps = 5/179 (2%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           R        +    +I       + +L P   +     +     +VV I +   G +   
Sbjct: 20  RTRKRGFLMLGAAVLIAGAAYGGYELLAPSSETTD---DAYVAGDVVAITAREPGTVLAI 76

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
             +N   + +G  L+ F+       +   + S+      + ++ S +D      ++L+  
Sbjct: 77  NADNTESVRRGQTLIEFDPATADAQMASAEASLARAVRSVRSDFSKVDE--TGAEILQAE 134

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            E    +      +  +    V    ++    S++     +      +    +     R
Sbjct: 135 AELTRARNDLARRRAAAAEGAVSGEEVAHAADSVRTAAAALTLARSRQAQARSTVEGTR 193


>gi|154706322|ref|YP_001424254.1| acriflavin resistance periplasmic protein [Coxiella burnetii Dugway
           5J108-111]
 gi|212212737|ref|YP_002303673.1| acriflavin resistance periplasmic protein [Coxiella burnetii
           CbuG_Q212]
 gi|154355608|gb|ABS77070.1| acriflavin resistance periplasmic protein [Coxiella burnetii Dugway
           5J108-111]
 gi|212011147|gb|ACJ18528.1| acriflavin resistance periplasmic protein [Coxiella burnetii
           CbuG_Q212]
          Length = 351

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 65/194 (33%), Gaps = 22/194 (11%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +    ++  + +  +   K             N   +   +E++      +   A   SK
Sbjct: 98  QLDNAQAQADYQSAVTAMKLARTKYERSKLLLNQAISQ--QELAALKADMESKEASVQSK 155

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L  L     +K + +P +G ++        +Y +   PL+ +V ++       +V    +
Sbjct: 156 LAAL----NEKVVNAPFSG-VLGAFQVQVGDYVKAGDPLVTLV-NTSQLRADFQVPENFL 209

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +K+G   T+    Y     K F   +  I P +S    +          + I  L  +
Sbjct: 210 PELKQGQLVTITTGTYPQ---KTFYGTVSFISPTVSSDTRS----------ISIQALVPN 256

Query: 400 DNNIELRNGFPAEV 413
           D  + L  G    V
Sbjct: 257 DKEL-LSPGMFVHV 269



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 51/128 (39%), Gaps = 3/128 (2%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
              I  +V++ G +     VV I +   G I +   ++G ++  G P++  ++ +     
Sbjct: 50  TADIPNTVNALGSLSAV-KVVTISAESDGRIAEIHFKSGQEVDTGMPIVQLDNAQAQADY 108

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDV--LEKAFESREEQLLDFLGKYHSTCSKVFN 154
                ++K  R   +  K  L+   ++ ++  L+   ES+E  +   L   +        
Sbjct: 109 QSAVTAMKLARTKYERSKLLLNQAISQQELAALKADMESKEASVQSKLAALNEKVVNAPF 168

Query: 155 YGISSVYR 162
            G+   ++
Sbjct: 169 SGVLGAFQ 176



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLIDLKKVSIKNLR 107
           N   + +PFSG++  FQV+ G  +  G PL+T  +  +      + +  +  L+
Sbjct: 160 NEKVVNAPFSGVLGAFQVQVGDYVKAGDPLVTLVNTSQLRADFQVPENFLPELK 213


>gi|90022877|ref|YP_528704.1| M50 family peptidase [Saccharophagus degradans 2-40]
 gi|89952477|gb|ABD82492.1| peptidase, M50 family [Saccharophagus degradans 2-40]
          Length = 711

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 59/138 (42%), Gaps = 7/138 (5%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVE-IKSPFSGII 67
           + ++  A  KR    S+   + +I    ++P+ +S  + G +   ++    ++   +G +
Sbjct: 412 VDKSITAHRKRAVAFSVAVSLTIIVALFVVPMPLSTKAEGVVWLPNDSQVRLQ--VAGEV 469

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID----TEKSALDFLNNK 123
            +  V +G  + +G P++  ++ +    + +++  ++  R   +     +++    L+  
Sbjct: 470 AQVLVNDGDVVQKGQPIILLKNAQLEASLKVQQAVLREYRARFEEVWSADRAQAGLLSED 529

Query: 124 YDVLEKAFESREEQLLDF 141
              +E      ++++   
Sbjct: 530 IRAVEDEIAFLQQKVAAL 547



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 4/136 (2%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + +  L+    +  E    F                       ++  L++      ++S
Sbjct: 492 AQLEASLKVQQAVLREYRARFEEVWSADRAQAGLLSEDIRAVEDEIAFLQQKVAALNVVS 551

Query: 295 PIAGTIVY-NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG-YTATVRF 352
           P +GTI +    +   +Y QQ      +V  ++   IR  +T  +I  V+K      VR 
Sbjct: 552 PASGTINFSVPYYLPGSYFQQGDIAGYVV-RAEPVNIRVALTQHEIGLVRKDTQAVEVRL 610

Query: 353 PH-YADIREKKFKAII 367
            H  A     + +  +
Sbjct: 611 AHRLAQTHRGEIEREV 626


>gi|282882688|ref|ZP_06291298.1| putative HylD family protein [Peptoniphilus lacrimalis 315-B]
 gi|281297501|gb|EFA89987.1| putative HylD family protein [Peptoniphilus lacrimalis 315-B]
          Length = 667

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 84/230 (36%), Gaps = 8/230 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN----LRCHIDTEKSALDFLNN 122
           +    V+ G ++ +G  + T +     + I  KK S +     +   I   K  LD    
Sbjct: 88  VSSINVKVGDEVKEGDIIATLDSSAIDEEIAKKKASARANNKTVGAGIAAAKKRLDEAVE 147

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                  A     +  ++     + +  K +    +S+ +    ++   ++   N    E
Sbjct: 148 NRSNGTNAGIVAAKASVEQSLDAYKSAQKTYEDYKNSLEKQYNPEIVGEKNSRENLAYGE 207

Query: 183 NKSSLLRALL----SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             S L    L    S ++K  +  + L E      + +  +   + + + ++   I + +
Sbjct: 208 KSSQLKYNQLINDFSDNKKKSSDNRVLAEDCNSRIDAIQSRIDDLTRKSTDIGIRISDVQ 267

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           N +  I         + ++  K  ++ LE + ++   E++ LT  ++  +
Sbjct: 268 NEISDIGSKGQSYKEQGSDVNKNEAKKLEDDIKSKRQELNSLTRYQEEIK 317



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 108/308 (35%), Gaps = 20/308 (6%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +   D   N+   LE   +S+ ++L + L +Y        +     +  +   K      
Sbjct: 282 EQGSDVNKNEAKKLEDDIKSKRQEL-NSLTRYQEEIKIELSKLSDELANAKSQKEKYTSE 340

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 +++++   L  +    +K    +K+  +K+  +    + Q   +    L +   
Sbjct: 341 ADALDKEIDSQRKNLDQMSIDIEKAHDDLKSDADKSIKASQARDDQ---LKTYKLAMDTA 397

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            +  K  L  +      A+ E  + L++       N     +   +L  L +  E+  I 
Sbjct: 398 ENSYKAALVSLKSAQTSADNEI-SMLRDALNSANANSNNLDEV--ELKYLNEELEKTKIR 454

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +   GTI    +       + +   ++ V       I + +    ++ VK G    +   
Sbjct: 455 ALKDGTITKIDA-KEGEVPKSAIARIETV---NKLKIESLIKEYNVKDVKIGTKVIITSD 510

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-YEVILKITDLAFSDNNIELRNGFPAE 412
              D    +F+  +  I+P     D N Q+++  Y+  ++I+      ++ +L  G    
Sbjct: 511 ALGDE---EFEGKVSFINPTPEDLDPNSQSKDVNYKTEIEISKE----DSEKLSPGMTLR 563

Query: 413 V-LFTAKN 419
           V    ++ 
Sbjct: 564 VKYILSEE 571


>gi|257453901|ref|ZP_05619178.1| putative nodulation protein [Enhydrobacter aerosaccus SK60]
 gi|257448673|gb|EEV23639.1| putative nodulation protein [Enhydrobacter aerosaccus SK60]
          Length = 385

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 52/171 (30%), Gaps = 15/171 (8%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           N L   N++  E         +    D    +     + ++L+  +K     TI +P +G
Sbjct: 126 NKLAERNKILLEQGFVSQIEYERSVADSIAQREAIKAKQAQLSSAQKMFGDTTIYAPTSG 185

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +             Q+Q LM+I+         A V  +    ++ G             
Sbjct: 186 IVSSRSVN-VGQVVTQNQALMEII-DPNKLEFAANVPSEAQTQLQLGQQV-------PFT 236

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              +    I +I  I  Q D   +    Y  +        S  N  LR G 
Sbjct: 237 ISNQTNQYIGQISRISPQVDAATRQLTIYIAV------KPSQRNRGLRPGM 281



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 20/228 (8%), Positives = 77/228 (33%), Gaps = 10/228 (4%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+ +G +   D+   ++S  +  +++   + G  + +G PL+  +  ++ + +   +  +
Sbjct: 57  VTVTGTLQPSDHT-VVQSTVNAQVQQVLADVGKTVAKGEPLVRLDISDSKNQLAQAQADV 115

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +          +      +    +    E  + D + +  +  +K      +     
Sbjct: 116 AAAQAQAIVANKLAERNKILLEQGFVSQIEYERSVADSIAQREAIKAKQAQLSSAQKMFG 175

Query: 164 LKMKLTRMRSIYLNRL----DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                     I  +R      +  ++  L  ++  ++ +           + +Q  L   
Sbjct: 176 DTTIYAPTSGIVSSRSVNVGQVVTQNQALMEIIDPNKLEFAANVP-----SEAQTQLQLG 230

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +++ +  + +  + I +   +   ++    +  +  A    + +R L 
Sbjct: 231 QQVPFTISNQTNQYIGQISRISPQVDAATRQLTIYIAVKPSQRNRGLR 278


>gi|238902578|ref|YP_002928374.1| putative HlyD family secretion protein [Escherichia coli BW2952]
 gi|238862455|gb|ACR64453.1| predicted HlyD family secretion protein [Escherichia coli BW2952]
          Length = 355

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGKF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAKPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|238787315|ref|ZP_04631114.1| Inner membrane protein yibH [Yersinia frederiksenii ATCC 33641]
 gi|238724577|gb|EEQ16218.1| Inner membrane protein yibH [Yersinia frederiksenii ATCC 33641]
          Length = 378

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 94/296 (31%), Gaps = 18/296 (6%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +  + + +G  L   +       +D  +  +     +    +  LD
Sbjct: 66  ITPQVTGIVTEVTNKQNALMKKGDILFKIDPTRYQARVDRLQADLVTAIHNAQALQGQLD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   L      R+    D+      + ++V  +  S +  + +  L +   +  + 
Sbjct: 126 EAIANTSHLSAE---RDRLSKDYQRYLRGSRAQVNPFSESDIDNARQNYLAQDALVKASV 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            +     S + ++L+  Q  +  ++  L E        + +     Y + + +R   +  
Sbjct: 183 AEQAQIKSQVDSVLNGEQSQIVSLRAQLTEAKYNIDQTVVRAPSNGYATQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  TI+ P+ 
Sbjct: 243 ALPLRPVMVFIPEQKRQIIAQFRQNSLLRLEAGDEAEVVFNALPGQVFPGKLTTII-PVV 301

Query: 298 GTIVYNQSFSSSNYAQQSQPL--MKIVPHSKLTYIRAKVTP-KQIQHVKKGYTATV 350
                          Q    L  + I+P +    +  ++ P  +I  +  G  A V
Sbjct: 302 ----------PGGAYQAQGTLQSLNIIPGTDGVLVVIELAPSSEIDTLPDGIFAQV 347


>gi|237807919|ref|YP_002892359.1| hypothetical protein Tola_1149 [Tolumonas auensis DSM 9187]
 gi|237500180|gb|ACQ92773.1| conserved hypothetical protein [Tolumonas auensis DSM 9187]
          Length = 357

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 92/236 (38%), Gaps = 18/236 (7%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           L  +   L+ + ++    +    G++    + + +    ++   +K     ++S+     
Sbjct: 66  LTTEPLTLQMSQDAVISAVNIKQGQHVKQGNLLISLEKPALQAEIKQLEENIQSLDKTLS 125

Query: 180 DLENKSS-LLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQ 237
           +  NK   LL+  +S  ++DL    +L+ K    +++ L Q E+    S L +   +   
Sbjct: 126 EEWNKQEILLKQKVSVAERDLKEKNDLYRKYMGFNEHGLLQLEQWANVSQLRVNAELLLL 185

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           ++         D+ +   A YL E+                +L +L+  + +  +++P+ 
Sbjct: 186 ESNRNLHALNQDKISGGAAQYLNELKL--------------RLQLLKARQAELQLMAPMD 231

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           G +            Q  +PLM +        + A +TP ++Q    G  ATV  P
Sbjct: 232 GEVKDVLV-QQGMTIQSGEPLM-LYAIRSQPVVMAYLTPSEVQFSGIGQQATVTLP 285



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 74/195 (37%), Gaps = 4/195 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR        + L  II  + +  W  +   ++ V S G +  E   + ++     +I  
Sbjct: 27  KRIAFRLRWYLILFLIISPVLIFVW-YITKDKVIVESPGILTTE--PLTLQMSQDAVISA 83

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD-FLNNKYDVLE 128
             ++ G  + QG  L++ E       I   + +I++L   +  E +  +  L  K  V E
Sbjct: 84  VNIKQGQHVKQGNLLISLEKPALQAEIKQLEENIQSLDKTLSEEWNKQEILLKQKVSVAE 143

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +  + + +    ++G       ++  +   S  R     L    +  L+ L+ +  S   
Sbjct: 144 RDLKEKNDLYRKYMGFNEHGLLQLEQWANVSQLRVNAELLLLESNRNLHALNQDKISGGA 203

Query: 189 RALLSSHQKDLTMMK 203
              L+  +  L ++K
Sbjct: 204 AQYLNELKLRLQLLK 218


>gi|254473351|ref|ZP_05086748.1| efflux transporter, RND family, MFP subunit [Pseudovibrio sp.
           JE062]
 gi|211957467|gb|EEA92670.1| efflux transporter, RND family, MFP subunit [Pseudovibrio sp.
           JE062]
          Length = 367

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 49/153 (32%), Gaps = 13/153 (8%)

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           EA  +  N     +  +   + T     ++L   E   ++  I +PI G I         
Sbjct: 135 EAASKLNNRGFSAANRVIALKATRDAAKAQLQEAELELDRTEIRAPIDGII-ETPLTEVG 193

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                 +    I+    +  I A V+   IQ VK G TA V       +  +  +  +  
Sbjct: 194 AMLGVGKVCATIMAPDPMLAIGA-VSESNIQAVKVGQTAVVNL-----VTGQSVEGKVSY 247

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           I                + V +++ +  F   +
Sbjct: 248 IASSADPDTRT------FRVEVELPNSDFELKD 274


>gi|148704364|gb|EDL36311.1| mCG142372 [Mus musculus]
          Length = 1806

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 84/260 (32%), Gaps = 27/260 (10%)

Query: 57   VEIKSPFSGIIKKFQVE----------NGSQILQGTPLLTF--EDIETTDLIDLKKVSIK 104
             ++      + ++ +V            G   L    ++    +  +  + +  K   + 
Sbjct: 1029 QQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQQLDERLKKKDFELN 1088

Query: 105  NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             L   I+ E++    L  K   L+   E     L D + ++ S   +     ++ +    
Sbjct: 1089 ALNARIEDEQALGSQLQKKLKELQANLEKMCRTLEDQMNEHRSKAEET-QRSVNDLTSQR 1147

Query: 165  KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL-------- 216
                T    +     + E   S L     ++ + L  +K   E+   ++N L        
Sbjct: 1148 AKLQTENGELSRQLDEKEALISQLTRGKLTYTQQLEDLKRQLEEEVKAKNALAHALQSAR 1207

Query: 217  ------NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                   +Q     ++  EL+  + +  + +      Y+   ++    L+E  + L Q  
Sbjct: 1208 HDCDLLREQYEEETEAKAELQRVLSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRL 1267

Query: 271  RTFADEMSKLTILEKTREQK 290
            +   + +  +     + E+ 
Sbjct: 1268 QDAEEAVEAVNAKCSSLEKT 1287



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 69/192 (35%), Gaps = 5/192 (2%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  E  + ++ K  S++  +  +  E   L     + +    A + ++      L ++  
Sbjct: 1269 DAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAEWKQ 1328

Query: 148  --TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                S+          RSL  +L ++++ Y   L+        +    + Q++++ +   
Sbjct: 1329 KYEESQSELESSQKEARSLSTELFKLKNAYEESLE---HLETFKRENKNLQEEISDLTEQ 1385

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
                  S ++L +  + +    LEL+  + E +  L H       A LEF     EI R 
Sbjct: 1386 LGSTGKSIHELEKIRKQLEAEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1445

Query: 266  LEQNQRTFADEM 277
            L +         
Sbjct: 1446 LAEKDEEMEQAK 1457



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 74/217 (34%), Gaps = 20/217 (9%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            +        + +++     ++ E     ++ L+F   K ++  K  E  EE  ++   + 
Sbjct: 1402 QLEAEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKLAEKDEE--MEQAKRN 1459

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            H          + +  RS    L   + +  +  ++E + S    + +  QK +  +++L
Sbjct: 1460 HLRMVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANRMAAEAQKQVKSLQSL 1519

Query: 206  FEKNAVSQNDLNQQ-----------ERIVYKSTLELRENIH--EQKNMLRHINELYDEAN 252
             +   +  +D  +            ER       EL E     EQ    R + E      
Sbjct: 1520 LKDTQIQLDDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSRKLAEQELIET 1579

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E    L   +  L   ++    ++S+L    +   Q
Sbjct: 1580 SERVQLLHSQNTSLINQKKKMDADLSQLQTEVEEAVQ 1616



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 68/196 (34%), Gaps = 12/196 (6%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
              E  + +   + + +  +  I       + L  + D      E  ++ +   +      
Sbjct: 1608 QTEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDT-SAHLERMKKNMEQTIKDLQHR 1666

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              +     +    + L+    R+R +     +LE +       +   +K    +K L  +
Sbjct: 1667 LDEAEQIALKGGKKQLQKLEARVRELEN---ELEAEQKRNAESVKGMRKSERRIKELTYQ 1723

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                + +L + + +V K  L++       K   R   E  ++AN   + + K +  +L++
Sbjct: 1724 TEEDRKNLLRLQDLVDKLQLKV-------KAYKRQAEEAEEQANTNLSKFRK-VQHELDE 1775

Query: 269  NQRTFADEMSKLTILE 284
             +       S++  L 
Sbjct: 1776 AEERADIAESQVNKLR 1791


>gi|148558978|ref|YP_001259251.1| HlyD family secretion protein [Brucella ovis ATCC 25840]
 gi|148370235|gb|ABQ60214.1| HlyD family secretion protein [Brucella ovis ATCC 25840]
          Length = 391

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 71  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 128

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 129 AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 188


>gi|186472848|ref|YP_001860190.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
 gi|184195180|gb|ACC73144.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
          Length = 451

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 85/276 (30%), Gaps = 34/276 (12%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            + +   +L   + ++ S+Y+N        +  ++ L+  Q DL   + +    AVS   
Sbjct: 138 ALGNAEATLGQTVRQVSSLYVNNDFYAANVAQKQSDLARAQDDLRRRQAVAGTGAVS--- 194

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                           E+I   ++ +       D A  +         R           
Sbjct: 195 ---------------AEDIAHARDTVTAAQAALDAARQQAQANRALTDRTTVAQHPNVQA 239

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             SK+        + T+ +P+ G +   +S           PLM +VP     ++ A   
Sbjct: 240 AASKVRDAYLAYARNTLPAPVTGYVAK-RSVQVGQRVSPGTPLMAVVPLDG-VWVDANYK 297

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----------E 385
             Q+++++ G    V         + ++   +             L  Q          +
Sbjct: 298 ESQLRNMRIGQP--VMLTADVYGGKVRYHGRVVGFSAGTGSAFATLPAQNATGNWIKVVQ 355

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                +++ +     + + +  G   EV    ++ T
Sbjct: 356 RLPARIQLDEKELEAHPLRI--GLSMEVDVDTRDNT 389


>gi|332028436|gb|EGI68479.1| Liprin-alpha-2 [Acromyrmex echinatior]
          Length = 1146

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 77/208 (37%), Gaps = 33/208 (15%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           + +  E    +      + +L+  +D + S L+            ++ R  +L   + + 
Sbjct: 176 SLDPTEQDSAV-----RVIDLQATLDKQSSELNT-----------WQRRVAELSGRVAEL 219

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             T SK     + +   SLK++   +R     + D E + + L     + Q++ T + +L
Sbjct: 220 EETLSKTQKDLLKAQEASLKLQRD-LRENAAQKEDQEERIATLEKRYLNAQRESTSLHDL 278

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--EIS 263
            EK         +QE    K+ L+L+E        +  I E  + A  + A Y K  E+ 
Sbjct: 279 NEK--------LEQELQHKKAQLKLQEE------KIAAIQEKLELAEQKLAQYAKLPEME 324

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
             L+Q          +    E   ++  
Sbjct: 325 EQLKQRMEALTQAQERHGSAEDRIQRLE 352



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 75/216 (34%), Gaps = 11/216 (5%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCH--IDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           +   E+  +    DL K    +L+    +    +  +    +   LEK + + + +    
Sbjct: 216 VAELEETLSKTQKDLLKAQEASLKLQRDLRENAAQKEDQEERIATLEKRYLNAQRESTS- 274

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           L   +    +   +  + +    +        + L    L  + + L  +    ++ +  
Sbjct: 275 LHDLNEKLEQELQHKKAQLKLQEEKIAAIQEKLELAEQKL-AQYAKLPEMEEQLKQRMEA 333

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLE-------LRENIHEQKNMLRHINELYDEANLE 254
           +    E++  +++ + + E  + +   E       L+ N      +   +++L  E+N  
Sbjct: 334 LTQAQERHGSAEDRIQRLETQLEEKNAEVMRVNQRLKMNEEHNTRLSTTVDKLLSESNER 393

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +LKE    LE+      +      + E  + +K
Sbjct: 394 LQVHLKERMHALEEKNALTQELEKTRKVAEDLQNEK 429


>gi|325299735|ref|YP_004259652.1| efflux transporter, RND family, MFP subunit [Bacteroides
           salanitronis DSM 18170]
 gi|324319288|gb|ADY37179.1| efflux transporter, RND family, MFP subunit [Bacteroides
           salanitronis DSM 18170]
          Length = 408

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 67/214 (31%), Gaps = 24/214 (11%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +DL   +     +  E      E +  L   N    E  L      ++ + D ++ + T+
Sbjct: 98  SDLQSAQATYNGAKAEY-----EYQKKLYERNRTLHEKQLISDTDYEQSTYDYQRAKSTY 152

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYI 330
               ++L+  E+     TI SPI G +                    L  I        +
Sbjct: 153 EQSQAELSKAERNLSYATITSPIDGIVTSKDV-EEGQTVASGFETPTLFTIAADLTQMQV 211

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-------DPIISQQDNNLQT 383
            A V    I  V  G   T     Y D     F+  + ++           S   ++  T
Sbjct: 212 VADVDEADIAGVTDGAKVTFTVDAYPDD---VFEGEVRQVRLGSVNSSSSSSSTSSSEST 268

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
              YEV++        + +++L+    A V    
Sbjct: 269 VVTYEVVITAD-----NPDLKLKPRLTANVTIYT 297



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 53/140 (37%), Gaps = 4/140 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +  S++++G I     V E+ +  SGII K  V+  S + QG  +   + +    
Sbjct: 40  AQTGSVSNSITATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSIVKQGEVIAEMDKVTLLS 98

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK---YHSTCSK 151
            +   + +    +   + +K   +     ++    +    E+   D+      Y  + ++
Sbjct: 99  DLQSAQATYNGAKAEYEYQKKLYERNRTLHEKQLISDTDYEQSTYDYQRAKSTYEQSQAE 158

Query: 152 VFNYGISSVYRSLKMKLTRM 171
           +     +  Y ++   +  +
Sbjct: 159 LSKAERNLSYATITSPIDGI 178


>gi|309782707|ref|ZP_07677428.1| dolichyl-phosphate-mannose-protein mannosyltransferase family
           protein [Ralstonia sp. 5_7_47FAA]
 gi|308918485|gb|EFP64161.1| dolichyl-phosphate-mannose-protein mannosyltransferase family
           protein [Ralstonia sp. 5_7_47FAA]
          Length = 361

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 62/187 (33%), Gaps = 13/187 (6%)

Query: 39  PIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           P    + ++G +         + + +  SG + +  V+ G  + +G  L+  ED     L
Sbjct: 41  PYATGIYANGIVESDQPSGANLNLYAEVSGTVARIAVQEGQAVKRGDVLIQIEDSVQRAL 100

Query: 96  IDLKKVSIKNLRCHIDT-----EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
              ++     +   ++       + AL+    +    +    + ++QL            
Sbjct: 101 TAQQQSQADAVDAQLNALLAQPRREALEVTRAQVGAADAGLRTVQDQLDKLEAAARLNPK 160

Query: 151 KVFNYGISSVYRSLKMK----LTRMRSIYLNRLDLEN-KSSLLRALLSSHQKDLTMMKNL 205
            V    I +   ++++     +   R   L R    +     L+    + QK       L
Sbjct: 161 AVSRDAIDNAANAVRVAHGNLVVAQRQYDLTRAGAWSYDIRTLQKQRDALQKGAAAAAAL 220

Query: 206 FEKNAVS 212
            EK AV 
Sbjct: 221 LEKYAVR 227


>gi|265991414|ref|ZP_06103971.1| secretion protein HlyD family protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265999408|ref|ZP_05466209.2| gram-negative bacterial RTX secretion protein D [Brucella
           melitensis bv. 2 str. 63/9]
 gi|263002198|gb|EEZ14773.1| secretion protein HlyD family protein [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263093733|gb|EEZ17738.1| gram-negative bacterial RTX secretion protein D [Brucella
           melitensis bv. 2 str. 63/9]
          Length = 391

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 71  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 128

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 129 AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 188


>gi|240141608|ref|YP_002966088.1| putative efflux pump component [Methylobacterium extorquens AM1]
 gi|240011585|gb|ACS42811.1| putative efflux pump component [Methylobacterium extorquens AM1]
          Length = 359

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 26/202 (12%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR----------TFADEMSKLTILE 284
            E     R  +    EA       L  +S  +E+ Q+                S+L+  +
Sbjct: 130 AEAAIKNREADLSVKEAQSARRAALSTVSTSVEEKQQFAGTAKIAEAALETARSQLSQAK 189

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           K  E+  + S + G +         +YAQ      +++  +   ++       ++ H+  
Sbjct: 190 KNLERTQVRSTVNGRVTNLLLR-VGDYAQTGTANARVI-DTDSFWVDGYFEETKMAHIHV 247

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEYYE---------VILKI 393
           G  A +    Y    +   +++   I      +           Y          V ++I
Sbjct: 248 GAPAEMALMGYGASLKGTVESLTLGISTANAATSTQGLPNVDPVYTWVRLAQRVPVRIRI 307

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
             +      + L  G  A V+ 
Sbjct: 308 DHV---PPEVTLVAGMTATVVV 326



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 5/124 (4%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +     VV I    +G I + +V +  ++ +G  L   +  +  D +   + +IKN 
Sbjct: 80  DGRVRV--QVVNIAPQVAGTIIELRVTDNQEVKKGDVLYVIDPFDYQDAVVSAEAAIKNR 137

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              +  +++          V   +    E+Q      K      +     +S   ++L+ 
Sbjct: 138 EADLSVKEAQSARRAALSTV---STSVEEKQQFAGTAKIAEAALETARSQLSQAKKNLER 194

Query: 167 KLTR 170
              R
Sbjct: 195 TQVR 198


>gi|149908115|ref|ZP_01896779.1| periplasmic component of efflux system [Moritella sp. PE36]
 gi|149808657|gb|EDM68590.1| periplasmic component of efflux system [Moritella sp. PE36]
          Length = 390

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 12/197 (6%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + L  IE    + G+I+   + + IKS   GI+ +   + G  +  GTPL+      T  
Sbjct: 50  AALGSIEKQAIAVGQIVPA-HSISIKSQIDGIVGEIYHQVGDVVTAGTPLIKVRPNPTPA 108

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +      +      +++ +  LD L      D++   +    +   D          K 
Sbjct: 109 ALTQANTELMRSEAALESAQQKLDNLKQLVSQDIIPTNYGEYIQAKSDVKSNLADVQQKK 168

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMK 203
            N+ +     S         +I                E  +S      ++    +  MK
Sbjct: 169 QNFDLIRSGESSVGNSKLTSTIISPIDGTILNLKVEVGEPITSTESRQAATEMMSIADMK 228

Query: 204 NLFEKNAVSQNDLNQQE 220
           N+  K ++S++D  Q +
Sbjct: 229 NMIFKGSISEHDAAQLQ 245



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 80/220 (36%), Gaps = 21/220 (9%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-LEFANYLKEISRDLEQNQRTFA 274
           L Q    + +S   L     +  N+ + +++     N  E+     ++  +L   Q+   
Sbjct: 110 LTQANTELMRSEAALESAQQKLDNLKQLVSQDIIPTNYGEYIQAKSDVKSNLADVQQKKQ 169

Query: 275 D---EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHS 325
           +     S  + +  ++   TI+SPI GTI+  +              Q +  +M I    
Sbjct: 170 NFDLIRSGESSVGNSKLTSTIISPIDGTILNLKV-EVGEPITSTESRQAATEMMSIA-DM 227

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           K    +  ++      ++ G +  V    Y  +     K  + K+  + S+  N   T  
Sbjct: 228 KNMIFKGSISEHDAAQLQVGTSVNVTLAPYPGM---VMKGTLSKV-AVQSEALNATTTSS 283

Query: 386 YYE----VILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                    +++ ++ F   +I +R+GF A      K  T
Sbjct: 284 SRSFDNGFKVEVGNIQF-PQDITIRSGFSATAKIILKQAT 322


>gi|85860999|ref|YP_463201.1| hlyD family secretion protein [Syntrophus aciditrophicus SB]
 gi|85724090|gb|ABC79033.1| hlyD family secretion protein [Syntrophus aciditrophicus SB]
          Length = 357

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 82/215 (38%), Gaps = 9/215 (4%)

Query: 17  LKRMTLLSIIGIIGLITWSILL--PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           L R+ +  +IG+  +  W        +  VS +G I   +  ++I +  +G IK+  +  
Sbjct: 10  LIRVVVALVIGLAAIGAWKRYGDRQEDGLVSGNGRIEATE--IDIAARTAGRIKEILMRE 67

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G  +   +       +   +  ++  +      +S L    ++      AF  +
Sbjct: 68  GDFVKAGQVVAHMDTDVLEAQLREAEARLQQAQSDAAIARSQLVQRESEKKA-ALAFVRQ 126

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            E  LD   K  +  + +   G +S   +   +   ++S        + +++   A + +
Sbjct: 127 REAELDVARKRLARSAALAAEGATSRQEADDDR-ASVQSCSAAVAATQAQTAAAEAAVVT 185

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            ++ +   ++  +    +Q  + + +  +  S L+
Sbjct: 186 AREQIAGKESAIK---AAQATIERIQADIRDSALK 217



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 35/325 (10%), Positives = 94/325 (28%), Gaps = 15/325 (4%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE----QLLDFLGKYHSTCSKVFNYG 156
            +I   + + D ++  L   N + +  E    +R      ++L   G +      V +  
Sbjct: 22  AAIGAWKRYGDRQEDGLVSGNGRIEATEIDIAARTAGRIKEILMREGDFVKAGQVVAHMD 81

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
              +   L+    R++     + D     S L    S  +  L  ++    +  V++  L
Sbjct: 82  TDVLEAQLREAEARLQQA---QSDAAIARSQLVQRESEKKAALAFVRQREAELDVARKRL 138

Query: 217 NQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            +   +  +     +E   ++ ++                    +      +   +    
Sbjct: 139 ARSAALAAEGATSRQEADDDRASVQSCSAAVAATQAQTAAAEAAVVTAREQIAGKESAIK 198

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              + +  ++       + SP  G + Y +             ++ +V  +   Y+   +
Sbjct: 199 AAQATIERIQADIRDSALKSPRDGRVQY-RVAQPGEVVGAGGRVLSLVDLND-VYMTFFL 256

Query: 335 TPKQIQHVKKGYTATVRFPH---YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
               +  V  G    +       Y       F A + +  P   +  +  +   +  V  
Sbjct: 257 PTAAVGRVALGTEVRLVLDAAPEYPIPARVSFIADVAQFTPKTVETTSEREKLMF-RVRA 315

Query: 392 KITDLAFSDNNIELRNGFPAEVLFT 416
           +I          +++ G P      
Sbjct: 316 QIPVELLQKYITQVKTGLPGVAWVK 340


>gi|323174124|gb|EFZ59752.1| hlyD family secretion family protein [Escherichia coli LT-68]
          Length = 355

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 121/404 (29%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V  G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVNEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|269959677|ref|ZP_06174057.1| putative secretion protein [Vibrio harveyi 1DA3]
 gi|269835600|gb|EEZ89679.1| putative secretion protein [Vibrio harveyi 1DA3]
          Length = 354

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 80/262 (30%), Gaps = 30/262 (11%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +   +     SL+    +  ++Y  R       +   A  ++  ++ + ++ L ++  
Sbjct: 78  RKYKIALEQAELSLQSAYEKEATLYSQREAALANIARAEATYNNAHREYSRLQKLSKQKV 137

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +SQ+ L+        S   L+      K +   + +   ++                   
Sbjct: 138 ISQSTLDNAFAQNQVSRAALKAEQQNLKVIEAQLGDKKGQSTAVRI-------------- 183

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  + +   +       +L+P  G +   Q       A  + PL+  VP     ++
Sbjct: 184 -----AKNGIDKAQLDLTNTAVLAPSDGVVTNLQL-EVGTMANTNMPLLTFVPTGS-MWV 236

Query: 331 RAKVTPKQIQHVKKGYTATVRFPH-----YAD----IREKKFKAIIEKIDPIISQQDNNL 381
            A    K +  V K Y A V F       Y             A       +   + NN 
Sbjct: 237 AADFREKSVAGVSKDYHAMVAFDANPGSVYDFELSSRDYGVAAAQQTPNGALTKVEVNNR 296

Query: 382 QTQEYYEVILKITDLAFSDNNI 403
             ++     + +T      +++
Sbjct: 297 WVRDAQRTRVNLTSEEALPSSL 318



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 69/209 (33%), Gaps = 15/209 (7%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++ + +L I+    +I      PI    ++ G +  +  VV++    SG +    ++N  
Sbjct: 11  MRTLIVLFIVLFFYIIIADRHAPI----TTEGRV--QGYVVQVAPEVSGKVTDVLIDNNQ 64

Query: 77  QILQGTPLLTFEDIET-----TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            + +G  L   +D +         + L+    K    +   E +  +    +        
Sbjct: 65  SVHKGDVLFKIDDRKYKIALEQAELSLQSAYEKEATLYSQREAALANIARAEATYNNAHR 124

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA- 190
           E    Q L        +              +LK +   ++ I     D + +S+ +R  
Sbjct: 125 EYSRLQKLSKQKVISQSTLDNAFAQNQVSRAALKAEQQNLKVIEAQLGDKKGQSTAVRIA 184

Query: 191 --LLSSHQKDLTMMKNLF-EKNAVSQNDL 216
              +   Q DLT    L      V+   L
Sbjct: 185 KNGIDKAQLDLTNTAVLAPSDGVVTNLQL 213


>gi|70733258|ref|YP_263031.1| membrane fusion protein [Pseudomonas fluorescens Pf-5]
 gi|68347557|gb|AAY95163.1| membrane fusion protein [Pseudomonas fluorescens Pf-5]
          Length = 321

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/291 (10%), Positives = 90/291 (30%), Gaps = 17/291 (5%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + L D L +  S  +         +   +  +L  +R    +++      + +       
Sbjct: 29  KSLQDRLPEGLSMGNGRLEATEVQIASKIPGRLAEVRVNEGDKVLQGQLLARMDTRTLEA 88

Query: 196 QKDLTMMKNLFEKNAVSQND----LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           Q++    + L  +  +S  +    L Q E ++    L   + + ++    + I +     
Sbjct: 89  QRNQAEAEVLRARENLSAAEANVQLRQSELLLANQELRRSQELFKRGFASQQIIDQQQAR 148

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                  +      +   +       +++  L    +  ++ +PI G I   +       
Sbjct: 149 LNTGNAAVLAAQAQVAAVKAAIGAAQAQVAQLTSEIDDSSLRAPIDGIIQ-LRLAEPGEV 207

Query: 312 AQQ-SQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                + L+ I P+ +    Y+ A VT      +  G  + +      +       + + 
Sbjct: 208 LGAGGRVLLLIDPNDQYMNLYLPASVT----GRLTVGDESRILLDALPNQPLPAKISFVA 263

Query: 369 KIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                  +  +  + + +  + V +++T  A        + G P       
Sbjct: 264 AKSQFTPKEVETRDERQKLVFRVKVRLTQPAAVPQA---KPGMPGAGYVRT 311



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 66/209 (31%), Gaps = 8/209 (3%)

Query: 9   LKRNHPAS--LKRMTLLSIIGIIGLITWSILLPI--EISVSSSGEILNEDNVVEIKSPFS 64
           +  NH +S       L+ +I       W  L     E     +G +   +  V+I S   
Sbjct: 1   MSTNHRSSRLFAVSLLILLIAAGAFGYWKSLQDRLPEGLSMGNGRLEATE--VQIASKIP 58

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + + +V  G ++LQG  L   +        +  +  +   R ++   ++ +    ++ 
Sbjct: 59  GRLAEVRVNEGDKVLQGQLLARMDTRTLEAQRNQAEAEVLRARENLSAAEANVQLRQSEL 118

Query: 125 DVLEKAFESREEQLLDFLGKYH--STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            +  +     +E                   N G ++V  +         +I   +  + 
Sbjct: 119 LLANQELRRSQELFKRGFASQQIIDQQQARLNTGNAAVLAAQAQVAAVKAAIGAAQAQVA 178

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             +S +         D  +   L E   V
Sbjct: 179 QLTSEIDDSSLRAPIDGIIQLRLAEPGEV 207


>gi|319786349|ref|YP_004145824.1| efflux transporter RND family, MFP subunit [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317464861|gb|ADV26593.1| efflux transporter, RND family, MFP subunit [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 508

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/233 (12%), Positives = 72/233 (30%), Gaps = 32/233 (13%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SR 264
           E   +++ D    E  + +   ++       +N    +     +   + A   +++    
Sbjct: 95  EGQVLARIDPKSYEAQIEQGNAQIASAQASLRNAQAALANAEADYQRKAALVDRQLIARA 154

Query: 265 DLEQNQRTFADEMSKLTILEKT--------------REQKTILSPIAGTIVYNQSFSSSN 310
           D++Q +       +++T  +                 ++  I SP+ G ++  +S     
Sbjct: 155 DVDQARAALDQARAQVTSAQAQIRQQAASTETTRVNLDRTVIRSPVNGVVLT-RSIEPGQ 213

Query: 311 YAQQ---SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                  +  L  I        I   V    I  VK G   +     + D +   F+  +
Sbjct: 214 TVAASLQAPELFTIAEDLAQMKIELSVDEADIGQVKPGQRVSFTVDAFPDRQ---FRGQV 270

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +++  + +   NN+ T            ++  +++  L  G            
Sbjct: 271 QQV-RLAATTTNNVVTYP--------VVVSVDNSDGTLLPGLTVNAEIEVSRR 314



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 59/199 (29%), Gaps = 22/199 (11%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSI-----------LLPIE-----ISV 44
           M      N +R          ++  +       W               P+E     +++
Sbjct: 1   MSRAPRPNSRRPRWLPFAGGAIVLALLGGAAWYWGGAGSRDTDGAWRTAPVERGNIRVAI 60

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           SS+G +     V  + S  SG + +  V+   ++ +G  L   +       I+     I 
Sbjct: 61  SSTGTLSATSTV-TVGSQISGQVLEVLVDFNDRVTEGQVLARIDPKSYEAQIEQGNAQIA 119

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           + +  +   ++AL      Y       + +     D             +   + V  + 
Sbjct: 120 SAQASLRNAQAALANAEADYQRKAALVDRQLIARADV-----DQARAALDQARAQVTSAQ 174

Query: 165 KMKLTRMRSIYLNRLDLEN 183
                +  S    R++L+ 
Sbjct: 175 AQIRQQAASTETTRVNLDR 193


>gi|237705589|ref|ZP_04536070.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|226900346|gb|EEH86605.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
          Length = 288

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 23/209 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K    +  ++       +  N+ +   V+  DL            EL     +     
Sbjct: 40  DGKIRAEQVSITPQVSGRIIELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQ 98

Query: 242 RHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +  +EAN           A  L   + +++  Q +     + L   +    Q  I 
Sbjct: 99  SGLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIR 158

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTAT 349
           +P++G +    +    +YA   +PL  +V       I      K+      H+++G  A 
Sbjct: 159 APVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQ 212

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +          K  +  +  I   I  Q 
Sbjct: 213 ITL----YSDNKTLQGHVSSIGRAIYDQS 237



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 54/177 (30%), Gaps = 21/177 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 4   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRII 59

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  +++   +  G  LLT +           +++  N +  +   +S L   NN+ +   
Sbjct: 60  ELNIKDNQLVNAGDLLLTIDKTPF-------QIAELNAQAQLAKAQSGLAKANNEANRRR 112

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                             +      N  + ++  S+      ++         E ++
Sbjct: 113 HLS----------QNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 159


>gi|237654623|ref|YP_002890937.1| efflux transporter RND family, MFP subunit [Thauera sp. MZ1T]
 gi|237625870|gb|ACR02560.1| efflux transporter, RND family, MFP subunit [Thauera sp. MZ1T]
          Length = 512

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 64/187 (34%), Gaps = 19/187 (10%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           +       I E     +        E +R L +  R     +  L +  +   ++   +P
Sbjct: 167 QSTGEELRIAERLASQSAAQDPIASESARRLAEATRA---RLRNLQVAGQAGARQVFHAP 223

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +G ++  ++            L +I   SK+  I A V  + +  V+ G +A V    Y
Sbjct: 224 ASGVVLEKEAI-EGGRFMPGDALFRIADLSKVWII-ADVYEQDLARVQVGQSAQVALEAY 281

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                  F A ++ + P +     +        V L++ +         LR G  A++  
Sbjct: 282 PGR---SFAARVDYLYPTLDAATRST------RVRLELDNPEGL-----LRPGMFAQIAL 327

Query: 416 TAKNTTL 422
            A + T 
Sbjct: 328 AAGDATP 334



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 53/123 (43%), Gaps = 9/123 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQV-ENGSQILQGTPLLTFEDIETTDLID 97
           ++ +V +SG I  ++    + +P F G I++  V   G  + +G PL T    E     +
Sbjct: 112 VDAAVRASGRIEFDERRQVVVAPRFEGWIERLHVNAVGDPVRKGQPLFTAYSPELQSTGE 171

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +++       + ++ +A D + ++     +  E+   +L +      +   +VF+   
Sbjct: 172 ELRIA-----ERLASQSAAQDPIASESA--RRLAEATRARLRNLQVAGQAGARQVFHAPA 224

Query: 158 SSV 160
           S V
Sbjct: 225 SGV 227


>gi|150389350|ref|YP_001319399.1| RND family efflux transporter MFP subunit [Alkaliphilus
           metalliredigens QYMF]
 gi|149949212|gb|ABR47740.1| efflux transporter, RND family, MFP subunit [Alkaliphilus
           metalliredigens QYMF]
          Length = 442

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/357 (10%), Positives = 105/357 (29%), Gaps = 74/357 (20%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V+ G ++ +   L   +           +  I+ L+ +++  +       +  D 
Sbjct: 75  ILSIDVKEGDKVEKDQVLAVLD-------AGHLEEEIEKLKDNVELLQIQNTEGKSSKDT 127

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                E R ++ L+   + + +  ++                                  
Sbjct: 128 STTLAEQRLKEELEGSQRSYESALEM---------------------------------- 153

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-NIHEQKNMLRHIN 245
                 S  +        L++    S+ +L  +E  + ++  ++   N+ + K       
Sbjct: 154 -----YSIAKSRYESTAVLYDSGMGSKWELTDKENALNEAKRKVDAFNVVDGKVQATDAQ 208

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                   + +N   E+        ++      +L   +K  +   + S I GTI    +
Sbjct: 209 LSEIRNAKKSSNNASEV--------KSIEIAKKELKRKQKELDDCKVKSSIQGTITRVNA 260

Query: 306 FSSSNYAQQSQPL-----MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                  + +  +     M ++ +     + A V+   I  ++ G    V+      +  
Sbjct: 261 K----VGRFADEIDDKNPMFVIENIDTLKMVANVSEYDIGKMEIGQK--VKISA-DILNG 313

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            +   I+ +I P   Q+  + +        +    +  + +   L  G  A      
Sbjct: 314 DEVDGIVSRISPTGEQKQGSNE-------RIIPVQIDVTGDTKGLIAGINALAKVET 363


>gi|170739514|ref|YP_001768169.1| secretion protein HlyD family protein [Methylobacterium sp. 4-46]
 gi|168193788|gb|ACA15735.1| secretion protein HlyD family protein [Methylobacterium sp. 4-46]
          Length = 311

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 59/194 (30%), Gaps = 13/194 (6%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +   E       + E       +  +     + D+EQ Q       ++L   +   ++ T
Sbjct: 99  QTQVEAIGAQLKLAETRLAEMSQLQSRGTGRAFDVEQRQAEADQLRAQLEGAKWNLDKTT 158

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P AG +                P+M  +         A++     ++++ G    + 
Sbjct: 159 VRAPAAGYVTNLTLR-KGARVTAQSPVMAFIDTGDTLL-GAEIPQIYARYIEPGQPVEIT 216

Query: 352 FPHYADIRE-KKFKAIIEKIDPIISQ------QDNNLQTQEYYEVILKITDLAFSDNNIE 404
           F          + +A+++ I    +Q         ++Q+  +  V   + D   +     
Sbjct: 217 FKTLPGTVHSGRVEAVLQAIATGQAQFGGSAVAPTDIQSAPF-VVRFTLDDAEVAR---R 272

Query: 405 LRNGFPAEVLFTAK 418
           L  G          
Sbjct: 273 LPAGSTGTAAIYTD 286



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/131 (11%), Positives = 39/131 (29%), Gaps = 4/131 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG      N V+I    +G +    V+  + + +G  L   +       ++     +K  
Sbjct: 53  SGPAAVIRNSVQIVPSVAGEVIDVPVKANTPLKEGDVLFRIDPTPYQTQVEAIGAQLKLA 112

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              +    + +  L ++        E R+ +      +       +    + +       
Sbjct: 113 ETRL----AEMSQLQSRGTGRAFDVEQRQAEADQLRAQLEGAKWNLDKTTVRAPAAGYVT 168

Query: 167 KLTRMRSIYLN 177
            LT  +   + 
Sbjct: 169 NLTLRKGARVT 179


>gi|108759744|ref|YP_632375.1| putative macrolide-specific efflux protein MacA [Myxococcus xanthus
           DK 1622]
 gi|108463624|gb|ABF88809.1| putative macrolide-specific efflux protein MacA [Myxococcus xanthus
           DK 1622]
          Length = 482

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 55/311 (17%), Positives = 95/311 (30%), Gaps = 53/311 (17%)

Query: 113 EKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           E+SA   +  + D   V E A      ++++   +      KV      +V     +   
Sbjct: 34  ERSAAVAVVERRDMEVVAESAGLVEPLRVVEVKSQASGEVLKVHYDTGDTVAEGTLLAEI 93

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
             R +       +      R  L++ +     M+ L +   V+Q +              
Sbjct: 94  EPRDVQNALAQAQADLESARVRLNTTEAQRQRMEALRKDGYVTQQEY------------- 140

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                    +      ++  E NL+ A         L           S  TILE+T + 
Sbjct: 141 ---ETAVDASATARATKVRAETNLQLARERSRDVTILA---------RSPGTILERTIQ- 187

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
                   G I+ + + + S        L K+     +  +RAKV    +  +K G  A 
Sbjct: 188 -------PGVIIASATNNVSG----GTALFKMA-DLSVMQVRAKVDETDVGQIKPGQKAR 235

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           V    Y       F   + KI+P    + N         V L    +   + +  LR G 
Sbjct: 236 VTMEAYPGRT---FIGEVVKIEPQALVEQN---------VTLFPVLVRMDNPDGLLRPGM 283

Query: 410 PAEVLFTAKNT 420
            AEV       
Sbjct: 284 NAEVAIEISRR 294


>gi|78778235|ref|YP_394550.1| secretion protein HlyD [Sulfurimonas denitrificans DSM 1251]
 gi|78498775|gb|ABB45315.1| Secretion protein HlyD [Sulfurimonas denitrificans DSM 1251]
          Length = 398

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 63/175 (36%), Gaps = 18/175 (10%)

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               DEA              + Q ++  A+    L   E    +  +LSPI G ++  +
Sbjct: 161 AREVDEAKASMDRAKAAYDATIAQTKQASAE----LAANEDNLRKAIVLSPIDGIVLERK 216

Query: 305 SFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                  A   Q   L K+        I   V    I  VK+  +       Y+D   KK
Sbjct: 217 VEPGQTVAATMQTPILFKMAEDLTKMRIILSVDEADIGDVKESQSVEFSVAAYSD---KK 273

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           FK  I ++  + S+  N + T   Y+ ++ +     ++ ++ LR G     L T 
Sbjct: 274 FKGTITQL-RLNSEIINGVVT---YDAVVDV-----NNQDLLLRPGMTVSALITT 319



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++G +    N V++    SG I++  V+  + +     +   +       ++  
Sbjct: 61  ITTTVSATGNLEP-TNSVDVGIEVSGTIREVLVDYNTHVKVSQVMAKLDTTRLNSAVESS 119

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K ++   R ++   K+ + +   +++ ++K + +                ++  +   +S
Sbjct: 120 KAALSRYRANVAEAKATVVYAQGEFERVDKMYSATNGNYPS---------AREVDEAKAS 170

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           + R+       +        +L      LR  +     D  +++   E  
Sbjct: 171 MDRAKAAYDATIAQTKQASAELAANEDNLRKAIVLSPIDGIVLERKVEPG 220


>gi|299145651|ref|ZP_07038719.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           3_1_23]
 gi|298516142|gb|EFI40023.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           3_1_23]
          Length = 416

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 89/249 (35%), Gaps = 19/249 (7%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + ++         +M +     +++E KS  L+    ++  +L  +K         ++  
Sbjct: 110 LRNIEDQRDEWEKQMITYQEQEIEMEQKSLNLKQQALTNGYELERLK---------KSIA 160

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             +E        + +  + E +   +  N    + +L   + +  I ++L +N R    E
Sbjct: 161 LDREEFQMGVKSKAQLQVAEDEYCYKQKNAALQQESLRHDSAVTMIRKELIRNDRER--E 218

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
             K     +      + +P+ G + + +  +        + + +I        I   ++ 
Sbjct: 219 RKKYERTRERLNSLVVTAPLKGQLSFVKV-TPGQQVSSGESIAEIK-VLDQYKIHTSLSE 276

Query: 337 KQIQHVKKGYTATVRF--PHYADIREKKFKAIIEK---IDPIISQQ-DNNLQTQEYYEVI 390
             I  +  G  ATV +    Y     K    + ++   ID I +    +N++  + + V 
Sbjct: 277 YYIDRITTGLPATVNYQGNKYPLKITKVVPEVKDRMFDIDLIFTGDMPDNVRVGKSFRVQ 336

Query: 391 LKITDLAFS 399
           +++     +
Sbjct: 337 IELGQPEQA 345


>gi|294101360|ref|YP_003553218.1| efflux transporter, RND family, MFP subunit [Aminobacterium
           colombiense DSM 12261]
 gi|293616340|gb|ADE56494.1| efflux transporter, RND family, MFP subunit [Aminobacterium
           colombiense DSM 12261]
          Length = 357

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 50/157 (31%), Gaps = 20/157 (12%)

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           +++EQ      +  ++L       ++  I S   G ++          A+    L ++  
Sbjct: 143 QEVEQAVALLNERKARLQEARTVFQRTAIRSSTKGVVLSKNIH-VGEIAEPGMELFRLAS 201

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 +   +      H+  G    V +       E   + +I++IDP    +      
Sbjct: 202 LED-LELEVMIASSDALHIDVGVPCRVLYS------ETVTRGVIKRIDPEAQAETGM--- 251

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              Y+ ++ +      +  + L  G   EV     + 
Sbjct: 252 ---YKGVISL------ERTLNLYPGTFVEVQIRMDSR 279



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 42/140 (30%), Gaps = 1/140 (0%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+I        I +     +    V+ G  ++ G  L   E +  T ++  ++   +N R
Sbjct: 67  GKIKAASE-QSITAYVREFVSSVHVDVGDMVIPGDILCELEKVTQTSVLTSQQTEFENAR 125

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++ +K            +E+A     E+                      V  S  + 
Sbjct: 126 RDLERKKHLYQAGGISKQEVEQAVALLNERKARLQEARTVFQRTAIRSSTKGVVLSKNIH 185

Query: 168 LTRMRSIYLNRLDLENKSSL 187
           +  +    +    L +   L
Sbjct: 186 VGEIAEPGMELFRLASLEDL 205


>gi|237730771|ref|ZP_04561252.1| membrane protein YbhG [Citrobacter sp. 30_2]
 gi|226906310|gb|EEH92228.1| membrane protein YbhG [Citrobacter sp. 30_2]
          Length = 331

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 55/399 (13%), Positives = 123/399 (30%), Gaps = 90/399 (22%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + + +++ +I   TW      +  ++  G +  +   V +     G +    V+ G  I 
Sbjct: 9   LVIAALVAVIAGGTWWYQSRQDNGLTLYGNV--DIRSVNLSFRVGGRLASLAVDEGDAIT 66

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G  L   +     + +   K ++   +   D   +                    E+ +
Sbjct: 67  AGQVLGELDRAPYENALMQAKANVAAAQAQYDLMLAGY-----------------REEEI 109

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                        ++Y  +   R + +  +R  S      DLEN  S     L+S +   
Sbjct: 110 AQTAAAVKQAQAAYDYAQNFYNRQVGLWKSRTISAN----DLENARSSRDQALASLK--- 162

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                       S  D   Q R   +      ++I + K  L        +A L   +  
Sbjct: 163 ------------SAQDKLTQYRSGNRV-----QDIEQAKATLEQAQAELAQAELNLHD-- 203

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                                          T+ SP  GT++  ++    +   +   ++
Sbjct: 204 ------------------------------TTLTSPSDGTLLT-RAVEPGSMLNEGGTVL 232

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----- 374
            +   ++  ++RA V  + +   + G    +   +     +K +   I  + P       
Sbjct: 233 TLS-LTRPVWVRAYVDERNLSQAQPGREILL---YTDGRPDKPYHGKIGFVSPTAEFTPK 288

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           + +  +L+T   Y + + +TD   +     LR G P  +
Sbjct: 289 TVETPDLRTDLVYRLRIVVTDADDA-----LRQGMPVTI 322


>gi|218558515|ref|YP_002391428.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli S88]
 gi|218365284|emb|CAR03005.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli S88]
 gi|294494048|gb|ADE92804.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli IHE3034]
 gi|307626869|gb|ADN71173.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli UM146]
 gi|315286365|gb|EFU45801.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           110-3]
 gi|323952155|gb|EGB48028.1| HlyD family protein secretion protein [Escherichia coli H252]
 gi|323956655|gb|EGB52392.1| HlyD family protein secretion protein [Escherichia coli H263]
          Length = 285

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 23/209 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K    +  ++       +  N+ +   V+  DL            EL     +     
Sbjct: 37  DGKIRAEQVSITPQVSGRIIELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQ 95

Query: 242 RHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +  +EAN           A  L   + +++  Q +     + L   +    Q  I 
Sbjct: 96  SGLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIR 155

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTAT 349
           +P++G +    +    +YA   +PL  +V       I      K+      H+++G  A 
Sbjct: 156 APVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQ 209

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +          K  +  +  I   I  Q 
Sbjct: 210 ITL----YSDNKTLQGHVSSIGRAIYDQS 234



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 54/177 (30%), Gaps = 21/177 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRII 56

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  +++   +  G  LLT +           +++  N +  +   +S L   NN+ +   
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPF-------QIAELNAQAQLAKAQSGLAKANNEANRRR 109

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                             +      N  + ++  S+      ++         E ++
Sbjct: 110 HLS----------QNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 156


>gi|332017518|gb|EGI58229.1| ERC protein 2 [Acromyrmex echinatior]
          Length = 1613

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 71/202 (35%), Gaps = 3/202 (1%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                 +  +  ++ LR  +D  +  +     + +  +   E   ++L       H    
Sbjct: 706 RLRSEAENAREEVERLRKELDRAREEIQQATVERERFQAQLEMLCQELEKNQVDLHEANK 765

Query: 151 KVFNYGISS---VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           K+      +     +  K    + R +   R  +E ++  +   + + ++    ++NL +
Sbjct: 766 KLQAGAAKAGADTIQERKQMEDQRRQLDEQRRQMEERAKTVDQKVRTIEEKERTLQNLDQ 825

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                +  ++Q E+ + KS     + + E +  L       ++A  E      E  R L 
Sbjct: 826 DLKKRKARMDQLEQQLQKSGGAPDKRLAEMQKTLEIAERDLEKAKKESDKSAAETERLLH 885

Query: 268 QNQRTFADEMSKLTILEKTREQ 289
             Q T  ++ SK   +   ++ 
Sbjct: 886 LVQMTQEEQNSKEKQIRDLQDA 907



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 69/199 (34%), Gaps = 9/199 (4%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +++ +   +  +  +   ++  + L    + +    E    QL         T  ++  
Sbjct: 619 DLEMVRERYEKSQIELRRLQNEREKLVADNERISFELERAHSQLNKAQAATEKTQEELAR 678

Query: 155 YG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               I  +Y     +   +R        L +++   R  +   +K+L   +   ++  V 
Sbjct: 679 MQLEIEKMYEKHDRQQAEVRKAQGEAERLRSEAENAREEVERLRKELDRAREEIQQATV- 737

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
                ++ER   +  + L + + + +  L   N+       +      +  + +E  +R 
Sbjct: 738 -----ERERFQAQLEM-LCQELEKNQVDLHEANKKLQAGAAKAGADTIQERKQMEDQRRQ 791

Query: 273 FADEMSKLTILEKTREQKT 291
             ++  ++    KT +QK 
Sbjct: 792 LDEQRRQMEERAKTVDQKV 810



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 68/203 (33%), Gaps = 11/203 (5%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                L ++ ++N R   D E+S       +         S+E + +       +T  + 
Sbjct: 235 AAKQRLARLELENERLRHDMERS-------QGYGRSTLNSSQEMERVQERADKTATELRR 287

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               +       +       ++       + +   L+A L + Q +   ++  +++   S
Sbjct: 288 AQAELRVTQADNERARAEAATLQEKVEKSQGEVYRLKARLENAQGEQESLREEYDRAQAS 347

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN--- 269
              L   ER      LE  +   E+      +    ++ N +F N   ++ + L Q+   
Sbjct: 348 VARL-HSERDKAIGELEKSQEELERTQATLGMQMEREKQNYDFENLQSQLDKALGQSTRM 406

Query: 270 QRTFADEMSKLTILEKTREQKTI 292
           Q+        +  L+   E+  I
Sbjct: 407 QKEREAIQLDVDRLQDKYEKAQI 429



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 69/197 (35%), Gaps = 10/197 (5%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLE--KAFESREEQLLDFLGKYHSTCSKVFNYG--ISS 159
            N +      K+  D +  +  + +  +  + +  Q+ +           +      + +
Sbjct: 763 ANKKLQAGAAKAGADTIQERKQMEDQRRQLDEQRRQMEERAKTVDQKVRTIEEKERTLQN 822

Query: 160 VYRSLKMKLTRMRSIYLNRLDL----ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           + + LK +  RM  +           + + + ++  L   ++DL   K   +K+A     
Sbjct: 823 LDQDLKKRKARMDQLEQQLQKSGGAPDKRLAEMQKTLEIAERDLEKAKKESDKSAAETER 882

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L    ++  +      + I + ++ L+       +A    A    + ++D    ++    
Sbjct: 883 LLHLVQMTQEEQNSKEKQIRDLQDALKTAQAKLKQATT--AQQESQDNKDESSCRKALEA 940

Query: 276 EMSKLTILEKTREQKTI 292
           +   +  LE+T E   +
Sbjct: 941 KNRAIFELERTMENLQM 957


>gi|291485822|dbj|BAI86897.1| hypothetical protein BSNT_04962 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 397

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 1/185 (0%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG++  E           G IKK  V+ G Q+ +G  L  +E  + +D ++   + I+  
Sbjct: 63  SGKVEPEKQQKVYIDSEKGSIKKTYVKEGDQVKKGDKLFEYEGEDHSDEVEQANLQIEMT 122

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              I+  + ++     K  V  K  +++ +  LD    +    S++           L  
Sbjct: 123 NLQINRLQKSITETEKKLKVAGKEEKTQLQDELD-QANFDLKTSQLELKQHQKELAGLTK 181

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                     +   +++ +  +    +  Q     ++ +     + ++ +N+      K 
Sbjct: 182 NKGSNVITSKHDGIVQSVNQDIADGATGDQATGPYIQIVSTGKYLVKSQINELLMDTIKK 241

Query: 227 TLELR 231
             ++R
Sbjct: 242 GSKVR 246



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 78/214 (36%), Gaps = 7/214 (3%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENI 234
             ++ ++++   ++         +     LFE +     +++ Q    +  + L++    
Sbjct: 71  QQKVYIDSEKGSIKKTYVKEGDQVKKGDKLFEYEGEDHSDEVEQANLQIEMTNLQINRLQ 130

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                  + +     E   +  + L + + DL+ +Q        +L  L K +    I S
Sbjct: 131 KSITETEKKLKVAGKEEKTQLQDELDQANFDLKTSQLELKQHQKELAGLTKNKGSNVITS 190

Query: 295 PIAGTIVY-NQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
              G +   NQ  +      Q + P ++IV  +    +++++    +  +KKG    V  
Sbjct: 191 KHDGIVQSVNQDIADGATGDQATGPYIQIV-STGKYLVKSQINELLMDTIKKGSKVRVTL 249

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
                  E ++K  +  I  + +      +++ +
Sbjct: 250 ---KTGGEGEWKGKVTSIGKLPAGAGEGEESESF 280


>gi|268591489|ref|ZP_06125710.1| multidrug efflux RND membrane fusion protein [Providencia rettgeri
           DSM 1131]
 gi|291313143|gb|EFE53596.1| multidrug efflux RND membrane fusion protein [Providencia rettgeri
           DSM 1131]
          Length = 369

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 71/206 (34%), Gaps = 20/206 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL-KEISRDLEQNQ 270
           S   + + + +V  +    + ++   +  LR+   LY+      A +L  E   D  + +
Sbjct: 87  SGQQVKKGQLLVQLNDAVEQADLSRYQAQLRNAARLYERTRSLSAQHLVAEAQVDSTRAE 146

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           R  A  + + T       QKTI +P  GTI   Q      Y    + +  +V  +K   +
Sbjct: 147 RDIAQGLIRQTQA--LIAQKTIRAPFDGTIGIRQVH-EGQYLSPGEAIASLV-DTKTLKL 202

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              +  +    + +G    +    Y +       A I  IDP+I +              
Sbjct: 203 NFSLDEQASPELHQGQIVDITVDAYPNKTFP---ARITAIDPLIGKS------------R 247

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFT 416
                    +++  L+ G  A V   
Sbjct: 248 TIALQATLENSDGTLKAGMYANVNVV 273



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 5/166 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             GE+     V  + +  +G I K   E+G Q+ +G  L+   D      +   +  ++N
Sbjct: 60  GVGELEAGSQV-LVAAETNGRITKIAFESGQQVKKGQLLVQLNDAVEQADLSRYQAQLRN 118

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                +  +S    L+ ++ V E   +S   +     G    T + +    I + +    
Sbjct: 119 AARLYERTRS----LSAQHLVAEAQVDSTRAERDIAQGLIRQTQALIAQKTIRAPFDGTI 174

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                    YL+  +        + L  +   D      L +   V
Sbjct: 175 GIRQVHEGQYLSPGEAIASLVDTKTLKLNFSLDEQASPELHQGQIV 220


>gi|77361736|ref|YP_341311.1| multidrug efflux system (AcrA/AcrE) [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876647|emb|CAI87869.1| putative multidrug efflux system (AcrA/AcrE family)
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 361

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 79/239 (33%), Gaps = 15/239 (6%)

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             YH     V    IS         + +  +   +R+  + +   +RA     + DL + 
Sbjct: 42  NNYHGKRETVLLQKISRSEWVPGSIIAKQNTQISSRVMAQVERLSVRAGDKVTKGDLLIT 101

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
                   + Q+D   Q          ++  + +    L+ I  +Y +  +  +  L   
Sbjct: 102 --------LQQDDFKAQLAQSEAQINAIQAALTQATKQLKRIESVYAQGLVSLSE-LDNA 152

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
             + +           + T  +       I +PI+G +V  +     + A   Q L+ + 
Sbjct: 153 KANFDSLSANLIAAKQQQTQAKVALSYTRITAPISGVVVE-RLVEPGDTATPGQALLGLY 211

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
            + +   +   V   Q   ++ G + T++ P           A + +I P+      +L
Sbjct: 212 -NPQQLQVEFNVRETQAVKLQLGQSLTIKLPALNLT----LPATVAEIVPVADSASRSL 265



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 47/141 (33%), Gaps = 1/141 (0%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I  S    G I+ + N   I S     +++  V  G ++ +G  L+T +  +    +  
Sbjct: 55  KISRSEWVPGSIIAKQNTQ-ISSRVMAQVERLSVRAGDKVTKGDLLITLQQDDFKAQLAQ 113

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  I  ++  +      L  + + Y     +    +    +F     +  +       +
Sbjct: 114 SEAQINAIQAALTQATKQLKRIESVYAQGLVSLSELDNAKANFDSLSANLIAAKQQQTQA 173

Query: 159 SVYRSLKMKLTRMRSIYLNRL 179
            V  S       +  + + RL
Sbjct: 174 KVALSYTRITAPISGVVVERL 194


>gi|85712913|ref|ZP_01043954.1| Membrane-fusion protein-like [Idiomarina baltica OS145]
 gi|85693293|gb|EAQ31250.1| Membrane-fusion protein-like [Idiomarina baltica OS145]
          Length = 354

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE--LYDEANLEFANYLKEISRDLEQ 268
           +++ D  Q E  + + + ++R +     +  +  +E     E+     + L+     L  
Sbjct: 78  IAELDKQQSEAQLTELSAQVRASQATLDDQQQQFDELNALTESQSVAKSELRRARAALNM 137

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +       + L   +   E  ++ +P  G +V  +      +        ++       
Sbjct: 138 ARAELESRKAALLRAQVQLEFHSLKAPFDG-VVSARYIDLGEWVTPGTAAFELT-RLDKL 195

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-IISQQDNNLQTQEYY 387
           Y+ A +  + + +V K    +V          K     +   D  I         ++  +
Sbjct: 196 YVDAFLPFRYLPYVDKTTEVSV--------IRKDLSGDVRHYDASISDIVPTTTNSERAF 247

Query: 388 EVILKITDLAFSDNNIELRNGFPAEV 413
            V +          +  L  G P +V
Sbjct: 248 RVRIS------ELPSDSLYVGMPVDV 267



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 39/105 (37%), Gaps = 3/105 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+ K   V+ G+++ QG  +   +  ++   +      ++  +  +D ++   D LN   
Sbjct: 59  GLFKAHNVDVGAKVAQGDTIAELDKQQSEAQLTELSAQVRASQATLDDQQQQFDELNALT 118

Query: 125 D---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +   V +         L     +  S  + +    +   + SLK 
Sbjct: 119 ESQSVAKSELRRARAALNMARAELESRKAALLRAQVQLEFHSLKA 163


>gi|56964948|ref|YP_176679.1| hypothetical protein ABC3184 [Bacillus clausii KSM-K16]
 gi|56911191|dbj|BAD65718.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 249

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 79/236 (33%), Gaps = 19/236 (8%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +E K   + + L    +++ +     E+ AV++++L           + L E + E + 
Sbjct: 30  SIEAKKQTIYSPLQGEIQNIHV----AEREAVAKDELL----------VSLDERLLELQT 75

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                +    +A +E A      +  L+          ++L   +  + +  I SP  G 
Sbjct: 76  AEAEASVRLADAEIEQAENEAASNVQLDALNSQRDQAQARLEQAQYHQSKANIHSPKDGA 135

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I+        ++ Q   PL+ I+           V   ++    +G    +         
Sbjct: 136 ILEWLID-EGDFVQTGTPLVTIL-TDAPLETTIYVPQSELPEFSEGMAVQISAVALPGET 193

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              F+  +  I+         ++T E     +    +    N+ +LR G   E+  
Sbjct: 194 ---FEGTVSFIEKEAIYSSQTIETNEDKASQVFPVHITIESNDEQLRAGMDVEIWI 246



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 3/110 (2%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E     I SP  G I+   V     + +   L++ ++          + S++     I+ 
Sbjct: 32  EAKKQTIYSPLQGEIQNIHVAEREAVAKDELLVSLDERLLELQTAEAEASVRLADAEIEQ 91

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            ++     N + D L    +  + +L     +YH + + + +    ++  
Sbjct: 92  AENEAAS-NVQLDALNSQRDQAQARL--EQAQYHQSKANIHSPKDGAILE 138


>gi|332524471|ref|ZP_08400680.1| RND family efflux transporter MFP subunit [Rubrivivax
           benzoatilyticus JA2]
 gi|332107789|gb|EGJ09013.1| RND family efflux transporter MFP subunit [Rubrivivax
           benzoatilyticus JA2]
          Length = 436

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 88/229 (38%), Gaps = 13/229 (5%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + I+V+++G +    +V  + S  SG + +  V+   ++ +G  L+  +  +  D ++  
Sbjct: 68  LAITVTATGTLQPTRSV-AVGSELSGTVARVLVDVNDRVKKGQVLVELDTAKLRDSVNGS 126

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + +++         ++ L           +A  +R E++    G    + +++ +   ++
Sbjct: 127 RANLQAAMAQRRQAEATLAE--------ARANLARYEEVSRLSGGKVPSAAELDSARATA 178

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS----QND 215
           +     +   +     +      N+++L +A + S      + +++   NAV+       
Sbjct: 179 LRAEADLAAAQASVAQVQTALSTNETNLAKASIRSPIDGTVLARSVEPGNAVAASLQAVT 238

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L      + K  L +  +  +   + +     +  A      Y   I+R
Sbjct: 239 LFTLAEDLTKMKLSVDVDEADVGQVRQGQKARFTVAAQPGRQYPARITR 287



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 56/198 (28%), Gaps = 18/198 (9%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             Q R    +  E R N+   +  +  ++     +  E  +      R         A  
Sbjct: 134 MAQRRQAEATLAEARANLARYEE-VSRLSGGKVPSAAELDSARATALRAEADLAAAQASV 192

Query: 277 MSKLTIL---EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIR 331
               T L   E    + +I SPI GT++       +  A   Q   L  +        + 
Sbjct: 193 AQVQTALSTNETNLAKASIRSPIDGTVLARSVEPGNAVAASLQAVTLFTLAEDLTKMKLS 252

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             V    +  V++G  A          +         +I  +            Y     
Sbjct: 253 VDVDEADVGQVRQGQKARFTVAAQPGRQYPA------RITRVAFGSTKTDNVVTY----- 301

Query: 392 KITDLAFSDNNIELRNGF 409
             TDL   + ++ LR G 
Sbjct: 302 -TTDLEVDNADLSLRPGM 318


>gi|319899426|ref|YP_004159523.1| secretion protein [Bartonella clarridgeiae 73]
 gi|319403394|emb|CBI76962.1| putative secretion protein [Bartonella clarridgeiae 73]
          Length = 361

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V +SG +     +V + +  +G +   +V +G  + +G  L   +  +  + +  K
Sbjct: 10  IEETVLASGIVRPY-RLVAVGARATGRVISVRVASGDVVEEGDLLAEIDPTDQENDLKRK 68

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +     ++   ++ L           K  E+R     +F      T  K+    I+ 
Sbjct: 69  KAVLSYYYANLKEHEAYLILAKQNLARQNKMIEARAVSRANFDDAV--TQVKIREAQIAQ 126

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +      +RS  +N
Sbjct: 127 LQEQIVQAQIDVRSAEVN 144



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 100/317 (31%), Gaps = 49/317 (15%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           +  +  + D+ E    S   +    +        +V +  ++S     +  L        
Sbjct: 1   MTAVVTRGDIEETVLASGIVRPYRLVAVGARATGRVISVRVASGDVVEEGDLLAEIDPTD 60

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              DL+ K ++L    ++ ++    +  L ++N   QN + +   +   +  +    +  
Sbjct: 61  QENDLKRKKAVLSYYYANLKEHEAYLI-LAKQNLARQNKMIEARAVSRANFDDAVTQVKI 119

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           ++  +  + E   +A ++                             E       + +P 
Sbjct: 120 REAQIAQLQEQIVQAQIDV-------------------------RSAEVNLSYTRVTAPS 154

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           AGT++             +Q    IV         I+A+++   I  V  G    + F  
Sbjct: 155 AGTVLA-TVVEEGQNINAAQSAPTIVILGDLSRMTIKAQISEADILKVHAGQ--DLYFTV 211

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQE------------YYEVILKITDLAFSDNN 402
             D R ++++  +E I+P      N++                YY  ++ +      + +
Sbjct: 212 LGDTR-RRYEGTLETIEPAPEAIRNDISINPNMSSSSLASSAIYYNGLVHVD-----NKD 265

Query: 403 IELRNGFPAEVLFTAKN 419
             LR    A+V      
Sbjct: 266 RFLRTYMTAQVNIILGR 282


>gi|302849571|ref|XP_002956315.1| hypothetical protein VOLCADRAFT_119338 [Volvox carteri f.
           nagariensis]
 gi|300258427|gb|EFJ42664.1| hypothetical protein VOLCADRAFT_119338 [Volvox carteri f.
           nagariensis]
          Length = 1217

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 55/197 (27%), Gaps = 10/197 (5%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG---- 156
             +      ++     L     +   L+    +  EQ  D + K      +V        
Sbjct: 305 AQLAKQAAELEATNGRLREAEAEIRALQSQLAAATEQAQDAIAKVGELQQQVTARASSLD 364

Query: 157 -----ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                +++    L    T ++ +     + E     L   +           +  E+   
Sbjct: 365 EAGSVLAARESELAEATTELQQLRTRLTEQEQAREALTREVQDLTGLGKQTTDKLEEAHS 424

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
              D   Q   V +   E +  +      L    +   +AN +    L +  R L   QR
Sbjct: 425 KLTDTQCQLGEVQRELSEAQRELAAANQQLTAQTQALADANAQL-QALADTQRQLVDTQR 483

Query: 272 TFADEMSKLTILEKTRE 288
             A    +L   E+  E
Sbjct: 484 ELATVERELAAAEQQLE 500



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/245 (12%), Positives = 82/245 (33%), Gaps = 14/245 (5%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             G+ L           +      ++ LR  +  ++ A + L  +   L    +   ++L
Sbjct: 365 EAGSVLA-----ARESELAEATTELQQLRTRLTEQEQAREALTREVQDLTGLGKQTTDKL 419

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +   K   T  ++       +  + +      + +      L + ++ L+AL  + ++ 
Sbjct: 420 EEAHSKLTDTQCQLGEVQ-RELSEAQRELAAANQQLTAQTQALADANAQLQALADTQRQL 478

Query: 199 LTMMKNLF---EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL--YDEANL 253
           +   + L     + A ++  L  + + +  S  +L+     Q+ +     EL    +   
Sbjct: 479 VDTQRELATVERELAAAEQQLEVKAQALADSGTQLQALADTQRELSAAQRELSAARQQIA 538

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A  L + +  L++++   A    +L    +           A T       +  +   
Sbjct: 539 AQAQALVDSNAQLQESRAALAATGERLNRALEEVAASESRVAEANT---QYLNTKQSVIS 595

Query: 314 QSQPL 318
            ++ L
Sbjct: 596 TAKQL 600



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 65/208 (31%), Gaps = 12/208 (5%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL-GKYHSTCSKVFN 154
           + +++   + L       +  LD      + L +A   + E   +    +     ++   
Sbjct: 195 LSVQERLDRELEALACAHQRVLDQATRLCEALRQAEVDKAELRTNVACARRRLEQAEANA 254

Query: 155 YGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                V +     L +    +     +++ +    +  LS  +K  T       K A   
Sbjct: 255 ADQQQVLQLRCAALEQENEQLTGMNQEMQQRFEGAQGELSLAKKQWTSDGAQLAKQAAEL 314

Query: 214 ----NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEIS 263
                 L + E  +     +L     + ++ +  + EL  +         E  + L    
Sbjct: 315 EATNGRLREAEAEIRALQSQLAAATEQAQDAIAKVGELQQQVTARASSLDEAGSVLAARE 374

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
            +L +         ++LT  E+ RE  T
Sbjct: 375 SELAEATTELQQLRTRLTEQEQAREALT 402



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/224 (10%), Positives = 68/224 (30%), Gaps = 23/224 (10%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL----LDFLGKYH 146
           +        + ++   R  ++  ++          +   A E   EQL     +   ++ 
Sbjct: 228 QAEVDKAELRTNVACARRRLEQAEANAADQQQVLQLRCAALEQENEQLTGMNQEMQQRFE 287

Query: 147 STCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD----LT 200
               +  +     +S    L  +   + +      + E +   L++ L++  +     + 
Sbjct: 288 GAQGELSLAKKQWTSDGAQLAKQAAELEATNGRLREAEAEIRALQSQLAAATEQAQDAIA 347

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------- 253
            +  L ++     + L++   ++     EL E   E + +   + E              
Sbjct: 348 KVGELQQQVTARASSLDEAGSVLAARESELAEATTELQQLRTRLTEQEQAREALTREVQD 407

Query: 254 ------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 +  + L+E    L   Q    +   +L+  ++      
Sbjct: 408 LTGLGKQTTDKLEEAHSKLTDTQCQLGEVQRELSEAQRELAAAN 451


>gi|167017129|sp|A7MJB1|AAEA_ENTS8 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
          Length = 310

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/222 (9%), Positives = 65/222 (29%), Gaps = 22/222 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q    +            +   +E++      N+L  +A       + + +  L+   
Sbjct: 78  IDQPRYQKALEEAEADVAYYQALANEKRREAGRRNQLGVQAMSR--EEIDQANNVLQTVL 135

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A   +   + +   ++  I +P  G +     ++   +  +    + +V  +   Y+
Sbjct: 136 HQLAKAEATRDLAKLDLQRTVIRAPADGWVTNLNVYT-GEFITRGSTAVALVKQNS-FYV 193

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV- 389
           +A +   +++ V+ G+   +                ++ +   ++   +    +    V 
Sbjct: 194 QAYMEETKLEGVRPGFRVEI--TPLGSNN--VLHGTVDSVSAGVTNASSTRDAKGMATVD 249

Query: 390 ----------ILKITDLAFSDNNIELRN-GFPAEVLFTAKNT 420
                      + +  +        L   G  A V       
Sbjct: 250 SNLEWVRLAQRVPV-RIRLDKQPGNLYPAGTTATV-VVTGER 289



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 45/157 (28%), Gaps = 5/157 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L      +   + L+ +  I     WS           + +     +VV I    +G+I 
Sbjct: 4   LTTKITRTAITVVLVVLAFIAIFRAWSFYTE----SPWTRDARFSADVVAIAPDVAGLIT 59

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +   + +   L T +       ++  +  +   +  +  EK       N+  V  
Sbjct: 60  SVDVHDNQLVKKDQVLFTIDQPRYQKALEEAEADVAYYQA-LANEKRREAGRRNQLGVQA 118

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            + E  ++         H          ++ +     
Sbjct: 119 MSREEIDQANNVLQTVLHQLAKAEATRDLAKLDLQRT 155


>gi|324111826|gb|EGC05806.1| HlyD family protein secretion protein [Escherichia fergusonii B253]
          Length = 355

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAVVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPASISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|167534796|ref|XP_001749073.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772497|gb|EDQ86148.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1781

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 78/208 (37%), Gaps = 5/208 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E +  +   +  + + R  +   + AL   ++K   L++  E  ++Q+ +         S
Sbjct: 910  ERSREVAELRERLASARAELQQHQGALVDRDHKVKTLQEELERFKDQVANLESDRAQQQS 969

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN- 209
            ++     ++     + KL R  S+  N   L+++ + L       +  L   + L ++  
Sbjct: 970  QLDKLQ-AATSDQHRDKLRRNSSMTTNINALQDQLASLNEENCELRARLESAEALADERQ 1028

Query: 210  -AVSQNDLNQQERIVYK--STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              V +   ++Q+    +    LEL +  ++     R I  L  +A       ++ +  +L
Sbjct: 1029 RLVREAQRSRQDETAKREGLGLELDKCQNQLTRAERRIESLEQQALDAAEKKIQRLQEEL 1088

Query: 267  EQNQRTFADEMSKLTILEKTREQKTILS 294
            +          +     +  R  ++I +
Sbjct: 1089 QAKSSAPGSGPASTRTRQGLRRSRSIFA 1116


>gi|195953762|ref|YP_002122052.1| efflux transporter, RND family, MFP subunit [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195933374|gb|ACG58074.1| efflux transporter, RND family, MFP subunit [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 374

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 67/205 (32%), Gaps = 19/205 (9%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q +    ++ L+     +++   L     + ++   E     +     +EQ +       
Sbjct: 120 QDQMKAAEANLQAISKTYQRFQKLIKTGAVTEQEYDEVKAKYEAAKAMVEQAKNAIMAAK 179

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +  +          I +P +G I      +  + A    PLM I        +   +  K
Sbjct: 180 AGASAAGANLAYANITAPFSGCIYMKNVNT-GDIAAPGMPLMMI--DKPPYRVDVALPEK 236

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I  +  G T  V    Y    +K  +  ++++   ++   +       ++V + I    
Sbjct: 237 YINKITPGQTLKV----YIGGIDKTVEGTVKEVSKALNPMSHT------FDVKIDI---- 282

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTL 422
              N   + +G  A+V       T+
Sbjct: 283 --PNQDGITSGLYAKVYIPKSQETV 305



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 37/92 (40%), Gaps = 3/92 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V++G  + +G  L+  +  + + ++       K  +  +   ++ L  ++  Y  
Sbjct: 80  VLGVYVKDGDCVKRGQLLVKLDTKDISSMVAQANYGAKQAQDQMKAAEANLQAISKTYQR 139

Query: 127 LEKAFES---REEQLLDFLGKYHSTCSKVFNY 155
            +K  ++    E++  +   KY +  + V   
Sbjct: 140 FQKLIKTGAVTEQEYDEVKAKYEAAKAMVEQA 171


>gi|67925756|ref|ZP_00519061.1| similar to Multidrug resistance efflux pump [Crocosphaera watsonii
           WH 8501]
 gi|67852401|gb|EAM47855.1| similar to Multidrug resistance efflux pump [Crocosphaera watsonii
           WH 8501]
          Length = 157

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 57/153 (37%), Gaps = 18/153 (11%)

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A+  ++  I     +   I+SP+ G I   ++    +  + SQ L  I+  +    +
Sbjct: 2   AELAEAKAQYQINAARLKDTKIISPVGGKISQPEAR-VGDITKSSQALFTII-ENNRLEL 59

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           + K+   Q+  ++ G T  +     ++++    +  + +I+PI+ +           +  
Sbjct: 60  QVKIPETQLTLIRPGQTVKITSDADSNLK---LQGKVREIEPIVDETSR--------QAT 108

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTA-KNTTL 422
           + +           L+ G    V      + TL
Sbjct: 109 VAVD----LPRQTALKPGMFLSVDIVTNSSRTL 137


>gi|299132422|ref|ZP_07025617.1| secretion protein HlyD family protein [Afipia sp. 1NLS2]
 gi|298592559|gb|EFI52759.1| secretion protein HlyD family protein [Afipia sp. 1NLS2]
          Length = 307

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 39/126 (30%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S   P   +V+ +G +      + I +P SG++    V+ G+ +  G  L   +D E   
Sbjct: 38  SAEAPFTSNVAGTGIVEASTENIAIGTPVSGVVASVLVKPGNHVRAGDALFRIDDRELKA 97

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +      +      +  +K  LD           A    E Q    +            
Sbjct: 98  QLLPAAAHVGEAEAILAKDKDILDRGEALSKANRDAISVEELQKRRLIVAIDQAALDRAK 157

Query: 155 YGISSV 160
             +  +
Sbjct: 158 ADVERL 163


>gi|260222923|emb|CBA32975.1| Multidrug resistance protein A [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 272

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/228 (11%), Positives = 72/228 (31%), Gaps = 25/228 (10%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           +   + L    AVS+ +LN  +  +  +   L             ++             
Sbjct: 1   MNRRQALAGNGAVSKEELNHAKSQLTTAQNALSAAQAGVAAAREQLSSNQTLTEGTNV-- 58

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
                    +   +     +K+        +  + +P+ G +   ++           PL
Sbjct: 59  ---------EGHPSVVAASAKVREAFLALHRAELPAPVDGYVAK-RTVQLGQRVAAGAPL 108

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE---------- 368
           M I+P +   ++ A     Q+++++ G    V+       ++ ++K  +           
Sbjct: 109 MAIIPLN-QLWVDANFKEVQLRNIRIGQP--VKLTADLYGKKMEYKGTVAGLGAGTGAAF 165

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            + P  +   N ++  +   V + +     + N + +     A V  T
Sbjct: 166 SLLPAQNATGNWIKVVQRVPVRVALDAEQLAQNPLRVGLSMEATVDVT 213


>gi|255527368|ref|ZP_05394244.1| EmrA-related transporter protein [Clostridium carboxidivorans P7]
 gi|296185625|ref|ZP_06854034.1| hypothetical protein CLCAR_1055 [Clostridium carboxidivorans P7]
 gi|255508940|gb|EET85304.1| EmrA-related transporter protein [Clostridium carboxidivorans P7]
 gi|296049753|gb|EFG89178.1| hypothetical protein CLCAR_1055 [Clostridium carboxidivorans P7]
          Length = 216

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 62/187 (33%), Gaps = 12/187 (6%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                +  ++   I     E N+E  + + +      Q+    AD            EQ 
Sbjct: 39  ARVSADLVSVTPQIQGKLLELNVEEGDSVSKNQILARQDMNNIAD---------SNVEQA 89

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +PI+G +V  Q  +      Q Q L  ++      Y+ A V   ++  V+ G    +
Sbjct: 90  LVRAPISGIVVKKQG-TIGEIWSQGQTLYTLI-DPNKLYVTADVEETKLGKVRVGQNVDI 147

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-DLAFSDNNIELRNGF 409
               ++  +       + +             +  + +V+ +I   +  +  N ++  G 
Sbjct: 148 TIDQFSSQKFTGKIKSVGEAANSALSILPTSTSGTFTKVVQRIPVKIELNKFNAKILPGT 207

Query: 410 PAEVLFT 416
            A V   
Sbjct: 208 NAVVKIH 214


>gi|15603848|ref|NP_246922.1| hypothetical protein PM1983 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12722422|gb|AAK04067.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 368

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 89/285 (31%), Gaps = 24/285 (8%)

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             +     ++S+Y     ++      Y+N+  L    + L +     Q D    +    +
Sbjct: 84  RLEFLRLDVASLYAGRVEQVLVKEGDYVNKDTL---LATLSSDTVKTQVDTAFARKQQAQ 140

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL-- 266
            AV +       +    +T  L  +   +    + I+    E  L   +  +     L  
Sbjct: 141 QAVKRVQAQLSAQQQQLNTALLDVDNAHKLRKNQLISSSEFEKRLALRDAAQANLHALDI 200

Query: 267 --EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
             ++ Q + A   ++L           I +P AG +VY       N     Q ++ ++  
Sbjct: 201 AVQEAQSSVAQADAQLRQAHAILADLQIKAPQAGRVVYKLV-EVGNVIAAGQKVVSLLDL 259

Query: 325 SKL---TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQ 376
           ++     +  A +    +  +     A + F     +    F A +  +           
Sbjct: 260 NEASMYLFFPAPI----VNQIPLQSEARLVFDGLEAV----FPATVSYVSSDAQFTPKFV 311

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           +    + +  ++V L+I           L+ G          ++T
Sbjct: 312 ETTTEREKLMFKVKLQIPSDIAQKYADYLKGGMTGNGYIRLSSST 356



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 58/171 (33%), Gaps = 12/171 (7%)

Query: 51  LNEDN------VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED----IETTDLIDLKK 100
           +   N       +++ S ++G +++  V+ G  + + T L T        +       K+
Sbjct: 78  IVSSNGRLEFLRLDVASLYAGRVEQVLVKEGDYVNKDTLLATLSSDTVKTQVDTAFARKQ 137

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            + + ++       +    LN     ++ A + R+ QL+            + +   +++
Sbjct: 138 QAQQAVKRVQAQLSAQQQQLNTALLDVDNAHKLRKNQLIS--SSEFEKRLALRDAAQANL 195

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +           S+      L    ++L  L     +   ++  L E   V
Sbjct: 196 HALDIAVQEAQSSVAQADAQLRQAHAILADLQIKAPQAGRVVYKLVEVGNV 246


>gi|294505906|ref|YP_003569964.1| efflux transporter, RND family, MFP subunit [Salinibacter ruber M8]
 gi|294342234|emb|CBH23012.1| efflux transporter, RND family, MFP subunit [Salinibacter ruber M8]
          Length = 434

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 38/103 (36%), Gaps = 4/103 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V+ G ++  G  +   +  +    +   + +    R   +  KS    L  + 
Sbjct: 151 GTVVDLPVQEGERVEAGQLIARLDGTDAQSRLQSARATRNAARSAYERAKS----LYAQG 206

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            V ++  E+R+ +      +     ++V +  I++ +     K
Sbjct: 207 IVSQQQLEARQREYEVAQSQLEQAQTQVGDTRITAPFDGRVAK 249



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 68/209 (32%), Gaps = 16/209 (7%)

Query: 211 VSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           V + +  +  +++ +    + +  +   +         Y+ A   +A  +    + LE  
Sbjct: 158 VQEGERVEAGQLIARLDGTDAQSRLQSARATRNAARSAYERAKSLYAQGIVS-QQQLEAR 216

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           QR +    S+L   +       I +P  G +        +      QP++ +     L+ 
Sbjct: 217 QREYEVAQSQLEQAQTQVGDTRITAPFDGRVAKKMV-ELNENVGPQQPVVTV---QDLSR 272

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   +   +   +++   +      ++    ++  A +++I      +         YE 
Sbjct: 273 MEVVIDVPEQSRMRRALQSESLAVTFSMRPGRRLPATLKEITTTADPRTRT------YEA 326

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            L I       ++  +  G  A  +    
Sbjct: 327 TLTI----RPPDDAGILPGMTARAIVGGG 351


>gi|157961378|ref|YP_001501412.1| secretion protein HlyD family protein [Shewanella pealeana ATCC
           700345]
 gi|157846378|gb|ABV86877.1| secretion protein HlyD family protein [Shewanella pealeana ATCC
           700345]
          Length = 349

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 75/246 (30%), Gaps = 22/246 (8%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              +  +  +  + + +      +  Q +       S     +   +      L   L  
Sbjct: 37  AAVQKNVATIAAEVEGVVTQVYVKNGQQVSKGQALFSIDQSRYLIAVKQAQAELDQALES 96

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             +     +  E  +S       +  + +   ++L ++  V+Q +L   +     S    
Sbjct: 97  NSAKGQELVSAEQLTSQRALEKLNASRKMKRYESLLKQGTVTQQELEDTQLAYKVSVSTE 156

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                E K +   +    D A +E A                     +KL   +   E  
Sbjct: 157 SAAKAEVKRIQVELATEQDNAAIELAK--------------------AKLAQAQLDLEHT 196

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I + +AG++   Q  +  +Y       M +V   + T++ A    K I H+K G    V
Sbjct: 197 VIKAKLAGSVSNLQLQT-GSYLAAGASAMFVV-SDQDTWLSADFNEKGIAHLKAGARVAV 254

Query: 351 RFPHYA 356
            F    
Sbjct: 255 VFDALP 260



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 61/194 (31%), Gaps = 5/194 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +     + +   + NV  I +   G++ +  V+NG Q+ +G  L + +       +   +
Sbjct: 28  DNIAPFTTQAAVQKNVATIAAEVEGVVTQVYVKNGQQVSKGQALFSIDQSRYLIAVKQAQ 87

Query: 101 VSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             +         +   L           LEK   SR+ +  + L K  +   +       
Sbjct: 88  AELDQALESNSAKGQELVSAEQLTSQRALEKLNASRKMKRYESLLKQGTVTQQELEDTQL 147

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS---SHQKDLTMMKNLFEKNAVSQND 215
           +   S+  +      +   +++L  +       L+     Q  L +   + +        
Sbjct: 148 AYKVSVSTESAAKAEVKRIQVELATEQDNAAIELAKAKLAQAQLDLEHTVIKAKLAGSVS 207

Query: 216 LNQQERIVYKSTLE 229
             Q +   Y +   
Sbjct: 208 NLQLQTGSYLAAGA 221


>gi|118577254|ref|YP_899494.1| RND family efflux transporter MFP subunit [Pelobacter propionicus
           DSM 2379]
 gi|118504759|gb|ABL01241.1| efflux transporter, RND family, MFP subunit [Pelobacter propionicus
           DSM 2379]
          Length = 472

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 101/291 (34%), Gaps = 28/291 (9%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            A  + ++Q  D LG    + ++     +++V    +     + ++ + + D +++ + +
Sbjct: 81  AAMTAEQKQQADMLGHVSLSPTQRVMANVATVEVRQQSLNKEINAVGIVQFD-QSRQAKV 139

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A ++     L +         VS+N       +    + +L     E    ++  ++L 
Sbjct: 140 TAWIAGRIDKLNVSTVGA---YVSKNR-----PVAEVYSPDLMSTQQEYLLAIKSRDQLK 191

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE---QKTILSPIAGTIVYNQS 305
           +      +   + +    +Q    F  + S++  LEK  +   +  I +P++G ++    
Sbjct: 192 NSPIPSISQNGEGLVASAKQRLMLFGVKESQIAALEKAGKPNIRLPIYTPLSGIVIEKMV 251

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                Y      L  I       ++  +V   +  ++  G    +R   +     K F  
Sbjct: 252 -QQGQYVNTGDVLFSIA-DLSTVWVEVEVYENEFPNIHIGQQVEIRSQSFP---GKPFTG 306

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +  I P +  +   +      +  +     A  +  ++L+       +  
Sbjct: 307 RVAFIYPFLDPKTRTV------KARV-----AMPNPGMKLKPDMFVNAIIK 346


>gi|217968772|ref|YP_002354006.1| efflux transporter RND family, MFP subunit [Thauera sp. MZ1T]
 gi|217506099|gb|ACK53110.1| efflux transporter, RND family, MFP subunit [Thauera sp. MZ1T]
          Length = 386

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 78/233 (33%), Gaps = 22/233 (9%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R+D+ ++ +     L   +       +L  +  +  +D++             +E   + 
Sbjct: 89  RIDVASRVTGFIRQLDVREGQAVRRGDLLLR--IDASDIDAAIAQARAGVQAAQEAWRDA 146

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +  +   N     A    A+ L++     E  + T     S L   +  R    I SP+ 
Sbjct: 147 QYDVNQ-NAQLVPAGAISADALRKSRVREETTRATLEQAQSALAAAQAQRNYVAITSPVD 205

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +V     S    A    PLM  V   ++   +A V  + +  +K G    VR     D
Sbjct: 206 GVVVSVARRS-GEMATPGAPLMT-VESREVLLFKAFVPERSLAAIKSGDLIPVRIDALGD 263

Query: 358 IRE-KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            R   + + ++   D +  +          YEV + +   A       L  G 
Sbjct: 264 ERFKGRVRGVVPSGDGVTRR----------YEVDIVLPRDA------RLLPGM 300



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             + ++   +G ++++   +++ S  +G I++  V  G  + +G  LL  +  +    I 
Sbjct: 72  ARLPVTNDVTGSVVSDG-RIDVASRVTGFIRQLDVREGQAVRRGDLLLRIDASDIDAAIA 130

Query: 98  LKKVSIKNLR 107
             +  ++  +
Sbjct: 131 QARAGVQAAQ 140


>gi|254523944|ref|ZP_05135999.1| secretion protein HlyD [Stenotrophomonas sp. SKA14]
 gi|219721535|gb|EED40060.1| secretion protein HlyD [Stenotrophomonas sp. SKA14]
          Length = 383

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 69/209 (33%), Gaps = 11/209 (5%)

Query: 54  DNVVEIKSPFS--------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             V  ++S  S        G++ +   E G ++ +G  L   +D      +   + ++  
Sbjct: 56  SGVGTVQSLQSAVLRPQVDGVLTEVLFEEGQKVSKGQLLARIDDRAIRADLGGAQAAVVR 115

Query: 106 LRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            R  +D  +   + L  L+    V  +  E +   +       H   + V    +   Y 
Sbjct: 116 DRATLDAARSDLARLQQLSTDQLVSRQMLEQQAATVQQLQATGHGNQAAVDAAQVQLSYT 175

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            +   +     +         +++  + L++  Q D   +     ++A+ Q         
Sbjct: 176 RILAPMDGRIGLRQVDPGNLVRATDTQGLVTVQQTDPISVVFALPQDALPQLRQALASGE 235

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEA 251
           V    L+    +   +  L+ I+   +E 
Sbjct: 236 VAVQALDRDGGLLLAEGRLQVIDNQVEET 264


>gi|254419478|ref|ZP_05033202.1| auxiliary transport protein, MFP family, putative [Brevundimonas
           sp. BAL3]
 gi|196185655|gb|EDX80631.1| auxiliary transport protein, MFP family, putative [Brevundimonas
           sp. BAL3]
          Length = 337

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 72/209 (34%), Gaps = 27/209 (12%)

Query: 17  LKRMTLLSIIGIIGLITWSILL-------------PIEI--SVSSSGEILNEDNVVEIKS 61
           L    +L I+ ++G + +S                 I+   +  ++G+   E  V+++ +
Sbjct: 10  LWIGLVLIIVLVVGFMAFSKAGAAKKAQVEKESAQKIDSPYAAIANGKADVEGGVIKVAA 69

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
              G++++  V  G +++ G  L   ED ET         ++   R  +   +  L    
Sbjct: 70  RRGGVVREVFVNEGDRVVTGQILARQEDDETRLAAQSAAAAVSESRAQLGLTRVELTAAR 129

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +Y+ L +            L   +   ++  +     + ++     ++  +I   +  L
Sbjct: 130 REYNRLSR------------LASTNFVAAQRLDQARDQIAQAEARLASQEAAIQTAQSRL 177

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +         +     D  + +   +  A
Sbjct: 178 DEARYNQELTVIRAPMDGRIARRYAQPGA 206


>gi|157368364|ref|YP_001476353.1| secretion protein HlyD family protein [Serratia proteamaculans 568]
 gi|157320128|gb|ABV39225.1| secretion protein HlyD family protein [Serratia proteamaculans 568]
          Length = 378

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 74/208 (35%), Gaps = 19/208 (9%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ--------ERIVYKSTLEL-- 230
            + + + L+A L +   +  ++K   ++   + + ++ +        +R V  S  ++  
Sbjct: 99  YQARVNRLQADLVTEINNTQVLKGQLDEAIANTSRVSAERDRLYKDYQRYVRGSQAKVNP 158

Query: 231 --RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
               +I   +      + L   +  E A    ++   +   Q       ++L   +   +
Sbjct: 159 FSESDIDNARQNYLAQDALVKGSVAEQAQIKSQLDSVINGEQSQIVSLRAQLAEAKYNLD 218

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           Q  I +P  G +          YA     +P+M  +P  K   I A+     +  +K G 
Sbjct: 219 QTVIRAPSDGYVTQVLIR-PGTYAAAIPLRPVMVFIPEQKRQII-AQFRQNSLLRLKAGD 276

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPII 374
            A V F  +           + +I P++
Sbjct: 277 EAEVVFNAFPGQVFP---GKLIRILPVV 301



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 66/204 (32%), Gaps = 4/204 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +G++ +   +    I +G  L   +       ++  +  +     +    K  LD
Sbjct: 66  ITPQVTGVVSEVTEKQNVLIKKGEVLFKLDPARYQARVNRLQADLVTEINNTQVLKGQLD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +      R+    D+      + +KV  +  S +  + +  L +   +  + 
Sbjct: 126 EAIANTSRVSAE---RDRLYKDYQRYVRGSQAKVNPFSESDIDNARQNYLAQDALVKGSV 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            +     S L ++++  Q  +  ++  L E        + +     Y + + +R   +  
Sbjct: 183 AEQAQIKSQLDSVINGEQSQIVSLRAQLAEAKYNLDQTVIRAPSDGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKE 261
              LR +     E   +     ++
Sbjct: 243 AIPLRPVMVFIPEQKRQIIAQFRQ 266


>gi|326433499|gb|EGD79069.1| hypothetical protein PTSG_02037 [Salpingoeca sp. ATCC 50818]
          Length = 5390

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 70/205 (34%), Gaps = 10/205 (4%)

Query: 94   DLIDLKKVSIKNLRCHIDTE-KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L + K+  +K  R  ++ E ++  D    + + L K  E +   L   +    +   ++
Sbjct: 4679 ALEERKQQVLKEKRSKLEAEVRARPDLSEQEMNRLMKQHEQQLNTLSARMDVERNRQQEL 4738

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT---MMKNLFEKN 209
                ++   +  + KL   R     + ++  +     AL     ++     M+ +L +  
Sbjct: 4739 IKAKLA-ERKQKRKKLQEQRQEVELQREIATQRQETEALKHEQVREAEREAMVTSLQQTG 4797

Query: 210  AVSQNDLNQ-QERIVYKSTLELRENI-HEQKNMLRHINELYDEA-NLEFANYLKEISRDL 266
              ++  +    +R   +   ++RE +  EQ   L+ +     E              +++
Sbjct: 4798 KDAETVVASVLQRRHAQELQQIREQVEAEQDVALKELKATIQERHEARLDERATRYEKEM 4857

Query: 267  EQNQRTFADEMSKLTILEKTREQKT 291
                   A    +    E+TR    
Sbjct: 4858 ADFMVESASIDPE--AAEETRRYIE 4880



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 73/225 (32%), Gaps = 23/225 (10%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL------- 142
            +  ++ +++ ++ +  L    ++    L+ +      +E     R EQ L  L       
Sbjct: 4610 VAVSEAVEVSQLEVPELEVAPESV-MELEAMEKNQQRMEAELRKRHEQELKELEGKLRKE 4668

Query: 143  -GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              +               V +    K +++ +    R DL  +   +  L+  H++ L  
Sbjct: 4669 AEEEEKRALDALEERKQQVLKE---KRSKLEAEVRARPDLSEQE--MNRLMKQHEQQLNT 4723

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +    +     Q +L + +    K   +  +   ++  + R I     E        ++E
Sbjct: 4724 LSARMDVERNRQQELIKAKLAERKQKRKKLQEQRQEVELQREIATQRQETEALKHEQVRE 4783

Query: 262  ISRDL---------EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              R+          +  +   A  + +    E  + ++ + +   
Sbjct: 4784 AEREAMVTSLQQTGKDAETVVASVLQRRHAQELQQIREQVEAEQD 4828



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 76/212 (35%), Gaps = 10/212 (4%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLG 143
             + +     +     + + K     +++E        N+    E A  +R E +L + L 
Sbjct: 4865 ASIDPEAAEETRRYIEQAYKLDVSELESE------YENELAQAETATNARLELKLTEMLL 4918

Query: 144  KYHSTCSKVFNYGISSVY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            K      + F   +  +  +S +      R++ L R+  E +           Q+   M+
Sbjct: 4919 KRKEQHYQEFAEALRDLSPQSDESAQAEQRAMELERMRQELEQQRREQFEELEQQQQDML 4978

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            K L  ++   Q  L +++    + + E+ E    ++ +         +   + A    E 
Sbjct: 4979 KELLAEH--QQAILQEEQEERERMSKEIEELNAVREKIKEESKMHMKKQYEQLAQLTDED 5036

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            S  +          +++L   EK R++  +++
Sbjct: 5037 SSAVLDRFSKNQAHLTQLLDAEKQRQKAALMA 5068



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/236 (11%), Positives = 79/236 (33%), Gaps = 34/236 (14%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              E +++T          + LR     +++       K  V  +     +      + + 
Sbjct: 4479 ELEALQSTPEFKALSREERRLRQDKIKQRAKARARQRKRVVEAEEDAKEQVLAARMVKQL 4538

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL-----RALLSSHQKDLT 200
            ++T          ++ ++          +     +  NK+        +  ++  ++ L 
Sbjct: 4539 NTTELNKLQEATRAMVQATAGSEDDAEKMAAEFDERRNKARQHLSDQHKQQMNRMKERLA 4598

Query: 201  MMKNLFEKNA----------VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + L ++ A          VSQ ++ + E +  +S +EL      Q+ M   + + +++
Sbjct: 4599 KTR-LKKQEALTVAVSEAVEVSQLEVPELE-VAPESVMELEAMEKNQQRMEAELRKRHEQ 4656

Query: 251  ANLEFA---------------NYLKEISRD-LEQNQRTF-ADEMSKLTILEKTREQ 289
               E                 + L+E  +  L++ +    A+  ++  + E+   +
Sbjct: 4657 ELKELEGKLRKEAEEEEKRALDALEERKQQVLKEKRSKLEAEVRARPDLSEQEMNR 4712



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 64/214 (29%), Gaps = 13/214 (6%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                +    +   K +R  +                 E A + REE             S
Sbjct: 4434 RVQAIAAHYQGLRKAVRERMSAAAKRRKDKRCTKIDTEAAQQEREELEALQSTPEFKALS 4493

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKDL----TMMKNL 205
            +          +       R R   +    D + +    R +   +  +L       + +
Sbjct: 4494 REERRLRQDKIKQRAKARARQRKRVVEAEEDAKEQVLAARMVKQLNTTELNKLQEATRAM 4553

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQ-KNMLRHINELYDEANLEFANYLKEISR 264
             +  A S++D  +      +   + R+++ +Q K  +  + E   +  L+    L     
Sbjct: 4554 VQATAGSEDDAEKMAAEFDERRNKARQHLSDQHKQQMNRMKERLAKTRLKKQEALTVAVS 4613

Query: 265  DLEQNQRTFADEMS-------KLTILEKTREQKT 291
            +  +  +    E+        +L  +EK +++  
Sbjct: 4614 EAVEVSQLEVPELEVAPESVMELEAMEKNQQRME 4647


>gi|323260686|gb|EGA44291.1| hypothetical protein SEEM8284_05028 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
          Length = 254

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  + + Y      +D+ Q +
Sbjct: 49  AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLSQYRTGNREQDIAQAK 107

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   +   +  T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 108 ASLEQAKAQLAQAQLDLQDTTLIAPANGTLLT-RAVEPGSMLNAGSTVLTLS-LTRPVWV 165

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 166 RAYVDERNLSQTQPGRDILL---YTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL 222

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 223 VYRLRIIVTDADDA-----LRQGMPVTV 245


>gi|323190036|gb|EFZ75314.1| multidrug resistance protein mdtN [Escherichia coli RN587/1]
          Length = 343

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L  +  VS  ++++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A     ++++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETELKNIRSGTPATIRLMS---NSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 42/136 (30%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSSL 187
               LN + L+ +S+ 
Sbjct: 164 AEADLNAVLLQAQSAA 179


>gi|317402022|gb|EFV82620.1| secretion protein HlyD [Achromobacter xylosoxidans C54]
          Length = 376

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 73/229 (31%), Gaps = 25/229 (10%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 R +L   + D  + + LF      +      +        EL     + +N   
Sbjct: 61  ASLEATRQVLVPAEVDGRVAQILFTPGERVRAGQLLVQLNDAPEQGELARLQAQARNARA 120

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +         + A         L+Q Q  +     ++  ++   EQK + +P  G ++ 
Sbjct: 121 LLERTRRLVPQQAA-----TREQLDQAQADYDQAAGEIKRIQALIEQKRVKAPFDG-VLG 174

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV--TPKQIQHVKKGYTATVRFPHYADIRE 360
            +      +A+   PL   V  +    + A +    + +  ++ G   ++    +A    
Sbjct: 175 VRRVHLGQFARAGDPL---VSLTDAASVYANITLPEQALGALRMGQPVSITVDAHAGR-- 229

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
             F+  +  I+P +              V ++ T    ++ +  L  G 
Sbjct: 230 -VFEGTVTTIEPQVDPGSRT--------VRVQAT---LANADGALAAGM 266



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 47/149 (31%), Gaps = 4/149 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V+ SG    E     +      G + +     G ++  G  L+   D      +   +  
Sbjct: 55  VALSGIASLEATRQVLVPAEVDGRVAQILFTPGERVRAGQLLVQLNDAPEQGELARLQAQ 114

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKA---FESREEQLLDFLGKYHSTCSKVFNYGISS 159
            +N R  ++  +  +       + L++A   ++    ++            K    G+  
Sbjct: 115 ARNARALLERTRRLVPQQAATREQLDQAQADYDQAAGEIKRIQALIEQKRVKAPFDGVLG 174

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           V R    +  R     ++  D  +  + +
Sbjct: 175 VRRVHLGQFARAGDPLVSLTDAASVYANI 203


>gi|316985941|gb|EFV64880.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
          Length = 204

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 83/243 (34%), Gaps = 41/243 (16%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
           VV + S   G I    VE+G+ +  G PL         +          N++  +  E +
Sbjct: 3   VVRVYSSDIGTITHKFVEDGNFVKAGEPLFKLSTSRFGEK--------GNVQAKLAAEAN 54

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
               L                Q L+ L + H    K  +  I  +   L+          
Sbjct: 55  LKKTLA--------------LQELERLKRIHQNEQKNVHNNIHRLNNQLE---------- 90

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
               +++ + +     +   +K L   K L  + AVSQ D    E  + +    L     
Sbjct: 91  ----NIKQQITGQNRQIRLAEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKR 146

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           EQ N +R +    DE  +  ++  +    +L Q  R   +   ++      + ++TI + 
Sbjct: 147 EQNNAIREL----DEQKITLSSLPERHKTELSQLNRAITEMNQEILDF-DLKSEQTIRAS 201

Query: 296 IAG 298
            +G
Sbjct: 202 KSG 204


>gi|124023361|ref|YP_001017668.1| ABC transporter [Prochlorococcus marinus str. MIT 9303]
 gi|123963647|gb|ABM78403.1| possible ABC transporter component [Prochlorococcus marinus str.
           MIT 9303]
          Length = 294

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 91/253 (35%), Gaps = 9/253 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSG-----IIKKFQVENGSQILQGTPLLTFEDI-ETTDL 95
            +V++ G++    +V  + +P SG      + K  V  G  + +G  L  F++  +T   
Sbjct: 38  EAVAALGQLEPAGDVRRLAAPASGFGGTPRVAKLSVREGDAVKRGQVLAEFDNRPKTFAD 97

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA---FESREEQLLDFLGKYHSTCSKV 152
           +   +  ++ L   +  ++  +        V   +    E ++E+L+   G+     +++
Sbjct: 98  LAAVQARLETLEVQLRMQRREVTRYQKAAMVGASSLVDLEEKQEELVKIDGQRREALAEI 157

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                      LK  L  +      R+     S  +  + ++   +  +     + N V+
Sbjct: 158 SGLEADLADSQLKSPLDGVVLRVHTRVGERPGSDGVMEVGANQTMEALIEVYESDVNRVN 217

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
              + +           L   +      +R  N L  +   +    + E+   L+QN  +
Sbjct: 218 IGQVVRLTSENGGFDGTLMGRVERISPQVRQRNVLSTDPTGDADARVVEVRVSLDQNSAS 277

Query: 273 FADEMSKLTILEK 285
               ++ + ++ +
Sbjct: 278 RVRSLAGMKVIAR 290



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 69/214 (32%), Gaps = 20/214 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY---------LK 260
           AV +  +  +     K+  +L       + +   +     E                 L+
Sbjct: 78  AVKRGQVLAEFDNRPKTFADLAAVQARLETLEVQLRMQRREVTRYQKAAMVGASSLVDLE 137

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP-LM 319
           E   +L +      + +++++ LE       + SP+ G +   +  +     +     +M
Sbjct: 138 EKQEELVKIDGQRREALAEISGLEADLADSQLKSPLDGVV--LRVHTRVG-ERPGSDGVM 194

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ-- 377
           + V  ++      +V    +  V  G    VR        +      +E+I P + Q+  
Sbjct: 195 E-VGANQTMEALIEVYESDVNRVNIGQ--VVRLTSENGGFDGTLMGRVERISPQVRQRNV 251

Query: 378 --DNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              +     +   V ++++    S + +    G 
Sbjct: 252 LSTDPTGDADARVVEVRVSLDQNSASRVRSLAGM 285


>gi|270208650|ref|YP_003329421.1| putative membrane fusion protein AcrA [Sinorhizobium meliloti]
 gi|76880924|gb|ABA56094.1| putative membrane fusion protein AcrA [Sinorhizobium meliloti]
          Length = 399

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 99/318 (31%), Gaps = 45/318 (14%)

Query: 95  LIDLKKVSIKNLRCHIDTE-KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +DL    I  LR  +D E ++ +  +   +  L    +    ++ D +    +  +++ 
Sbjct: 32  QVDLAVAEIGLLRVTLDEEGETRVRDVYTLHAPLRGQLQRITAEVGDVVKAGETQLAQIE 91

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLEN-KSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               + +    + +L           +L   + +  +A L+  + +    + L E+  +S
Sbjct: 92  PAPPAFLDVRTEAELQAAVEAARAAHNLAAAELNKAKADLTFAEGERARARQLIERRTIS 151

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q  L   ER    +   L       K                          +L Q +  
Sbjct: 152 QRTLEDAERSYNVAQANLATAEAALKVR----------------------EHELHQARSR 189

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIR 331
                 ++  L +  E   + +P++G ++     S     +   PL+ I  P      I 
Sbjct: 190 LLS-RQEIRSLREDCECMPVTAPVSGVVLQVMRRSEG-VVEAGTPLLAIGDPAD--LEIV 245

Query: 332 AKVTPKQIQHVKKGYTATV-------------RFPHYADIREKKFKAIIEKIDPIISQQD 378
                +    ++ G  A +             R   +   +        +++D I+   D
Sbjct: 246 VNFLSEDAVRIRPGQRAIITDWGGEDLNAVVRRIEPFGQTQVSALGIEEQRVDVILDFAD 305

Query: 379 NNLQTQEY---YEVILKI 393
                +     Y V +++
Sbjct: 306 PTESWRSLGHGYRVDVQV 323


>gi|22127432|ref|NP_670855.1| multidrug resistance protein MdtN [Yersinia pestis KIM 10]
 gi|45442702|ref|NP_994241.1| multidrug resistance protein MdtN [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108809162|ref|YP_653078.1| multidrug resistance protein MdtN [Yersinia pestis Antiqua]
 gi|108810647|ref|YP_646414.1| multidrug resistance protein MdtN [Yersinia pestis Nepal516]
 gi|145597716|ref|YP_001161792.1| multidrug resistance protein MdtN [Yersinia pestis Pestoides F]
 gi|150260348|ref|ZP_01917076.1| putative HlyD family secretion protein [Yersinia pestis CA88-4125]
 gi|162419725|ref|YP_001605620.1| multidrug resistance protein MdtN [Yersinia pestis Angola]
 gi|165925079|ref|ZP_02220911.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165937781|ref|ZP_02226342.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|166008871|ref|ZP_02229769.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166212150|ref|ZP_02238185.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167399315|ref|ZP_02304839.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167422973|ref|ZP_02314726.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167426432|ref|ZP_02318185.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167466770|ref|ZP_02331474.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis FV-1]
 gi|218927813|ref|YP_002345688.1| multidrug resistance protein MdtN [Yersinia pestis CO92]
 gi|229837295|ref|ZP_04457458.1| putative HlyD family secretion protein [Yersinia pestis Pestoides
           A]
 gi|229840510|ref|ZP_04460669.1| putative HlyD family secretion protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229842946|ref|ZP_04463097.1| putative HlyD family secretion protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229900840|ref|ZP_04515964.1| putative HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|270487784|ref|ZP_06204858.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Yersinia pestis KIM D27]
 gi|294502700|ref|YP_003566762.1| putative HlyD family secretion protein [Yersinia pestis Z176003]
 gi|21960523|gb|AAM87106.1|AE013958_3 conserved hypothetical protein [Yersinia pestis KIM 10]
 gi|45437568|gb|AAS63118.1| putative HlyD family secretion protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108774295|gb|ABG16814.1| HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|108781075|gb|ABG15133.1| putative HlyD family secretion protein [Yersinia pestis Antiqua]
 gi|115346424|emb|CAL19296.1| putative HlyD family secretion protein [Yersinia pestis CO92]
 gi|145209412|gb|ABP38819.1| HlyD family secretion protein [Yersinia pestis Pestoides F]
 gi|149289756|gb|EDM39833.1| putative HlyD family secretion protein [Yersinia pestis CA88-4125]
 gi|162352540|gb|ABX86488.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis Angola]
 gi|165914193|gb|EDR32809.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Orientalis str. IP275]
 gi|165923279|gb|EDR40430.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165992210|gb|EDR44511.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166206896|gb|EDR51376.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166957136|gb|EDR55157.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167051819|gb|EDR63227.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167054655|gb|EDR64462.1| auxiliary transport protein, membrane fusion protein family
           [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|229682179|gb|EEO78271.1| putative HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|229690012|gb|EEO82070.1| putative HlyD family secretion protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229696876|gb|EEO86923.1| putative HlyD family secretion protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705418|gb|EEO91428.1| putative HlyD family secretion protein [Yersinia pestis Pestoides
           A]
 gi|262360729|gb|ACY57450.1| putative HlyD family secretion protein [Yersinia pestis D106004]
 gi|262364676|gb|ACY61233.1| putative HlyD family secretion protein [Yersinia pestis D182038]
 gi|270336288|gb|EFA47065.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Yersinia pestis KIM D27]
 gi|294353159|gb|ADE63500.1| putative HlyD family secretion protein [Yersinia pestis Z176003]
 gi|320016820|gb|ADW00392.1| putative HlyD family secretion protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 349

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 93/288 (32%), Gaps = 26/288 (9%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                L   +    S++       +V E +   R + L       +    +     +   
Sbjct: 42  SEDAELGASVVHIASSVPGRIISINVEENSKVRRGDLLFSIEPDLYRLQVEQAQAELKMA 101

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +   +   + +   N      +    +A L    + L  ++ L  K  V+   ++   
Sbjct: 102 EATHDTQQRTVVAERSNAAITNEQIVRAQANLKLATQTLARLQPLRPKGYVTAQQVDDAA 161

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
              + + + L++ + +       ++       L  A                     + L
Sbjct: 162 TAKHDAEVSLKQALKQSVAAEALVSSTASSEALVVA-------------------RRAAL 202

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            I E+      I +P  G +V     S+  +    Q +  ++ +++  +  A     +++
Sbjct: 203 AIAERELANTQIHAPNDGRVVGLTV-SAGEFVAPDQAIFTLI-NTEHWHASAFFRETELK 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD--NNLQTQEY 386
           H+K G  ATV        R++  +  +E I   +S +D  N  +   Y
Sbjct: 261 HIKVGDCATVYVMA---DRQRAIQGRVEGIGWGVSSEDMLNIPRGLPY 305


>gi|311278088|ref|YP_003940319.1| secretion protein HlyD family protein [Enterobacter cloacae SCF1]
 gi|308747283|gb|ADO47035.1| secretion protein HlyD family protein [Enterobacter cloacae SCF1]
          Length = 378

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 68/231 (29%), Gaps = 21/231 (9%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                   +   +S +   L   +    S+     + +  ++   A      KD      
Sbjct: 91  LFELDPTRYQARVSRLEADLVTAIHNAESLQGQLDEAKANTAQASAERDRLYKDYQRY-- 148

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
                          +    K       +I   +      + +   A  + A    ++  
Sbjct: 149 --------------LQGSKAKVNPFSESDIDNARQNYLAQDAMVKSALAQQAQIKSQLDS 194

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVP 323
            +   Q   A   ++L   +   EQ  + +P  G +        +   A   +P+M  +P
Sbjct: 195 VMNGEQSQIASLRAQLAEAKYDVEQTVVRAPSDGYVSQVLIRPGTFAAALPLRPVMVFIP 254

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
             K   I A+     +  +K G  A +    +  +  + F   +  I P+I
Sbjct: 255 QQKRQII-AQFRQNSLLRLKPGDEAEI---VFNSLPGQVFSGKLTAIQPVI 301



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 67/204 (32%), Gaps = 4/204 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI++    +  + I +G  L   +       +   +  +     + ++ +  LD
Sbjct: 66  ITPQVTGIVRTVTDKTNTLIKKGEVLFELDPTRYQARVSRLEADLVTAIHNAESLQGQLD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                     +A   R+    D+      + +KV  +  S +  + +  L +   +    
Sbjct: 126 EAKANT---AQASAERDRLYKDYQRYLQGSKAKVNPFSESDIDNARQNYLAQDAMVKSAL 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
                  S L ++++  Q  +  ++  L E     +  + +     Y S + +R      
Sbjct: 183 AQQAQIKSQLDSVMNGEQSQIASLRAQLAEAKYDVEQTVVRAPSDGYVSQVLIRPGTFAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKE 261
              LR +     +   +     ++
Sbjct: 243 ALPLRPVMVFIPQQKRQIIAQFRQ 266


>gi|331655228|ref|ZP_08356227.1| inner membrane protein YibH [Escherichia coli M718]
 gi|331047243|gb|EGI19321.1| inner membrane protein YibH [Escherichia coli M718]
          Length = 372

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 347


>gi|161830788|ref|YP_001596896.1| RND family efflux transporter MFP subunit [Coxiella burnetii RSA
           331]
 gi|161762655|gb|ABX78297.1| efflux transporter, RND family, MFP subunit [Coxiella burnetii RSA
           331]
          Length = 351

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 65/194 (33%), Gaps = 22/194 (11%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +    ++  + +  +   K             N   +   +E++      +   A   SK
Sbjct: 98  QLDNAQAQADYQSAVTAMKLARTKYERSKLLLNQAISQ--QELAALKADMESKEASVQSK 155

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L  L     +K + +P +G +         +Y +   PL+ +V ++       +V    +
Sbjct: 156 LAAL----NEKVVNAPFSG-VFGAFQVQVGDYVKAGDPLVTLV-NTSQLRADFQVPENFL 209

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +K+G   T+    Y     K F   +  I P++S    +          + I  L  +
Sbjct: 210 PELKQGQLVTITTGTYPQ---KTFYGTVSFISPMVSSDTRS----------ISIQALVPN 256

Query: 400 DNNIELRNGFPAEV 413
           D  + L  G    V
Sbjct: 257 DKEL-LSPGMFVHV 269



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 53/132 (40%), Gaps = 2/132 (1%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
              I  +V++ G +     VV I +   G I +   ++G ++  G P++  ++ +     
Sbjct: 50  TADIPNTVNALGSLSAV-KVVTISAESDGRIAEIHFKSGQEVDTGMPIVQLDNAQAQADY 108

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
                ++K  R   +  K  L+   ++ + L       E +      K  +   KV N  
Sbjct: 109 QSAVTAMKLARTKYERSKLLLNQAISQQE-LAALKADMESKEASVQSKLAALNEKVVNAP 167

Query: 157 ISSVYRSLKMKL 168
            S V+ + ++++
Sbjct: 168 FSGVFGAFQVQV 179


>gi|16131359|ref|NP_417944.1| predicted membrane fusion protein (MFP) of efflux pump [Escherichia
           coli str. K-12 substr. MG1655]
 gi|89110525|ref|AP_004305.1| predicted HlyD family secretion protein [Escherichia coli str. K-12
           substr. W3110]
 gi|586667|sp|P37626|YHII_ECOLI RecName: Full=Uncharacterized protein yhiI; Flags: Precursor
 gi|466624|gb|AAB18463.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655]
 gi|1789900|gb|AAC76512.1| predicted membrane fusion protein (MFP) of efflux pump [Escherichia
           coli str. K-12 substr. MG1655]
 gi|85676556|dbj|BAE77806.1| predicted HlyD family secretion protein [Escherichia coli str. K12
           substr. W3110]
 gi|260447497|gb|ACX37919.1| secretion protein HlyD family protein [Escherichia coli DH1]
 gi|315138061|dbj|BAJ45220.1| predicted membrane fusion protein (MFP) of efflux pump [Escherichia
           coli DH1]
          Length = 355

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/404 (11%), Positives = 122/404 (30%), Gaps = 78/404 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGKF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++                            ++ +  +   +   R I    D++ L+   
Sbjct: 187 NI----------------------------IQAQTRVEAAQATERRIAADIDDSELK--- 215

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                                               +P  G + Y +             
Sbjct: 216 ------------------------------------APRDGRVQY-RVAEPGEVLAAGGR 238

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     + 
Sbjct: 239 VLNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKT 297

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + ++ + +  + V  +I       +   ++ G P         
Sbjct: 298 VETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 341


>gi|167037446|ref|YP_001665024.1| RND family efflux transporter MFP subunit [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115859|ref|YP_004186018.1| RND family efflux transporter MFP subunit [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|166856280|gb|ABY94688.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928950|gb|ADV79635.1| efflux transporter, RND family, MFP subunit [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
          Length = 393

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 88/254 (34%), Gaps = 32/254 (12%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           + + L   DL  +  + +  L   Q  L  +K L EK +       Q         L   
Sbjct: 90  KLLELETQDLSIQYQIAQKQLEMAQMQLDALKKLKEKQSQQSQVAAQIPNTSLPQQLPSG 149

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E+  +Q +           + ++ ++   +    L+Q Q   A+   K       ++QK 
Sbjct: 150 ESTVQQPST----------SQIQTSSLSLDDQIKLQQKQVEIAELNLKNIKQNMYKQQKY 199

Query: 292 ILSPIAGTI-----VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           +++   GT+       N  F+SS +   +  +  +        I   V P    ++K+G 
Sbjct: 200 VIAEFDGTVTIVNAKDNSYFTSSQF--PAIAVEDL----NNLQIALDVKPYDAVNLKEGQ 253

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            A + F        K F+ ++ K+ P  ++           +V +         N+  ++
Sbjct: 254 KAYIHFAD------KTFEGVVSKVSPTATKVITQTGGDNVVKVYVD-----LLSNDGTIK 302

Query: 407 NGFPAEVLFTAKNT 420
            GF  +V       
Sbjct: 303 PGFNVDVDIKIAEK 316



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 49/137 (35%), Gaps = 6/137 (4%)

Query: 51  LNEDNVVE---IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           + E    +   I SP    + K  V  G  + +G  LL  E  + +    + +  ++  +
Sbjct: 57  VVESKSKQEYYILSPT--KVLKVYVSVGDNVKKGDKLLELETQDLSIQYQIAQKQLEMAQ 114

Query: 108 CHIDTEKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +D  K   +  + +  V  +    S  +QL           +        S+   +K+
Sbjct: 115 MQLDALKKLKEKQSQQSQVAAQIPNTSLPQQLPSGESTVQQPSTSQIQTSSLSLDDQIKL 174

Query: 167 KLTRMRSIYLNRLDLEN 183
           +  ++    LN  +++ 
Sbjct: 175 QQKQVEIAELNLKNIKQ 191


>gi|118581634|ref|YP_902884.1| RND family efflux transporter MFP subunit [Pelobacter propionicus
           DSM 2379]
 gi|118504344|gb|ABL00827.1| efflux transporter, RND family, MFP subunit [Pelobacter propionicus
           DSM 2379]
          Length = 405

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 76/269 (28%), Gaps = 58/269 (21%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN--LFEKNAVSQNDL 216
                +   L R         +L  +++L +A +     + TM +N  L ++  +SQ D 
Sbjct: 82  QPIAEIDPSLFRAAVEQSRGNNLVARANLQKARVVLVDAERTMKRNSTLLKEGVISQGDF 141

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           +  E     +   +                                       Q T A  
Sbjct: 142 DTAETAYQSARAAVEA------------------------------------AQGTVAQT 165

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIRAK 333
              L           I SP+ G ++  ++         S     L  I        I   
Sbjct: 166 EGALMQARTNLNYSIIRSPVDGIVIS-RAVDVGQTVAASFQTPTLFTIAQDLTKMQIEVS 224

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYEVIL 391
           V    I  +++  T T     Y    E+ F+  + +I   PII+Q               
Sbjct: 225 VDEADISSIRQSQTVTFSVDSYP---EQSFRGRVTQIRNAPIITQNVVTYVVL------- 274

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               +   +++++L+ G  A V       
Sbjct: 275 ----VTVDNSDLKLKPGMTANVTIEVARK 299



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 49/138 (35%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   VS++G +     V  + +  SG I K  V+  S + +G P+   +       ++  
Sbjct: 41  IVSGVSATGNVSAVTTVQ-VGTQVSGTIHKLYVDYNSPVKKGQPIAEIDPSLFRAAVEQS 99

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +    NL    + +K+ +  ++ +  +   +   +E  +         T  +     + +
Sbjct: 100 RG--NNLVARANLQKARVVLVDAERTMKRNSTLLKEGVISQGDFDTAETAYQSARAAVEA 157

Query: 160 VYRSLKMKLTRMRSIYLN 177
              ++      +     N
Sbjct: 158 AQGTVAQTEGALMQARTN 175


>gi|322692030|ref|YP_004221600.1| ABC transporter permease [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|320456886|dbj|BAJ67508.1| ABC transporter permease component [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 1235

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 75/225 (33%), Gaps = 26/225 (11%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E    ++  K  + + R  +D  ++ L     K +      +    Q+   L       +
Sbjct: 408 EARTQLESGKAQLTSARKQLDAAQTELTANRTKIEQGITQIDQGMAQIDQMLSMIQQADN 467

Query: 151 KVFN------------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS-HQK 197
            +                I  +   L + L  + SI   R  L  K + L+    S  Q+
Sbjct: 468 LLAQLDPNIDLNSPTWQAIKQLLARLGITLPEVPSISDLRQQLTAKQTELQTQRDSLAQQ 527

Query: 198 DLTMMKNLFEKNAVSQNDLNQQ-------ERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + + L E  A +Q+ L+QQ       E+       +L     E +     +     +
Sbjct: 528 KADLQRTLNETIAPAQSTLDQQNAQLTAKEQEAAAGEAQLNTKSAELEANAATLETQSAQ 587

Query: 251 ANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              + A        L+E  R LE+ ++  AD  +KL   +   + 
Sbjct: 588 LEAQAAQLASGKRQLEEGERQLEEGEQQLADGKAKLDDAQSALDA 632


>gi|254470584|ref|ZP_05083988.1| MFS multidrug efflux pump, membrane fusion protein, EmrA subfamily
           [Pseudovibrio sp. JE062]
 gi|211960895|gb|EEA96091.1| MFS multidrug efflux pump, membrane fusion protein, EmrA subfamily
           [Pseudovibrio sp. JE062]
          Length = 307

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 72/242 (29%), Gaps = 27/242 (11%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +        M L  +R         E   +   A +++        + 
Sbjct: 52  LMQIDPEPFALAVQEARAQEAMSLANLRRSEAEVQVAEAAVTAAVAKVANLSAQQQRFEE 111

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L +   V+Q  L          TL L E   E  +    +     +  ++ + Y    + 
Sbjct: 112 LTDNGFVTQQRL-------DNITLSLEEANAETDSARDTLRAAAHQVEVQRSTYEASQAA 164

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                            + +    + ++LSP+ G +         NY  Q  P M ++  
Sbjct: 165 T---------------ALAQYNLRKSSLLSPVDGVVSEYTVN-PGNYVLQGIPQMALI-T 207

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +    I A +  +    +K G T   +         +  K  +  I   IS+ D + +  
Sbjct: 208 NTNWRIIANLIERHAARLKPGQTVYFQVSS---DPYRVHKGTVRSIGRGISRMDQDPRVL 264

Query: 385 EY 386
            Y
Sbjct: 265 PY 266



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 19/165 (11%), Positives = 50/165 (30%), Gaps = 3/165 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV +    SG + +  V+    +  G  L+  +       +   +        ++ 
Sbjct: 20  VSADVVRVSPEISGFVTEVPVDRNKAVKAGELLMQIDPEPFALAVQEARAQEAMSLANLR 79

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ +               +   Q   F     +    V    + ++  SL+      
Sbjct: 80  RSEAEVQVAEAAVTAAVAKVANLSAQQQRFEELTDNGF--VTQQRLDNITLSLEEANAET 137

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQND 215
            S         ++  + R+   + Q    + + NL + + +S  D
Sbjct: 138 DSARDTLRAAAHQVEVQRSTYEASQAATALAQYNLRKSSLLSPVD 182


>gi|167621685|ref|YP_001672193.1| secretion protein HlyD family protein [Caulobacter sp. K31]
 gi|167351808|gb|ABZ74534.1| secretion protein HlyD family protein [Caulobacter sp. K31]
          Length = 385

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/376 (13%), Positives = 91/376 (24%), Gaps = 84/376 (22%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             V  +    SG + + +V++   +  G  L   +D              +  R  +D  
Sbjct: 85  GRVTIVSPQVSGYVAEVRVKDFDNVEAGQALFRVDD--------------RIYRQRLDQA 130

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K+ L       D   +   SR   L   +                               
Sbjct: 131 KATLAARQADLDNATQTGASRRATLGARVA------------------------------ 160

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                     +     A L   Q D+  +  L    +VS      +ER    + L   E 
Sbjct: 161 ----------EVGSAEAQLVRAQADMARVSELALDGSVSL-----RERDQSLAGLRAAEA 205

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              Q    R + E            +  +  + E          + + + E       I 
Sbjct: 206 TVRQAAAGRDVAE----------QDVVAVGVNREALVAAVEGARAAVRLAEIDLSNTVIT 255

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
               G +    +     Y      L+ +VP S      A    +Q   +  G    V   
Sbjct: 256 VTENGQLGQVGAR-LGQYVTAGSQLVSLVPPSYWVI--ANFKERQTSRMAVGQKVHVSVD 312

Query: 354 HYADIREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
              D         IE+I P          +Q      T+    + ++I           +
Sbjct: 313 ALGDRH---LAGRIEQISPATGSEFAVLPAQNATGNFTKIAQRLPVRIALDPGQQGLERI 369

Query: 406 RNGFPAEVLFTA-KNT 420
           R G             
Sbjct: 370 RPGMSVVAYVDTPGER 385


>gi|312879465|ref|ZP_07739265.1| secretion protein HlyD family protein [Aminomonas paucivorans DSM
           12260]
 gi|310782756|gb|EFQ23154.1| secretion protein HlyD family protein [Aminomonas paucivorans DSM
           12260]
          Length = 345

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/363 (11%), Positives = 101/363 (27%), Gaps = 81/363 (22%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           +   V++ S  +G +    V  G  + +   L   ++              ++LR  +D 
Sbjct: 47  DAKEVDVNSRVAGRVVDLLVREGELVSRDAVLARIDN--------------RDLRARLDQ 92

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            + A   L+                                    + + ++    + + +
Sbjct: 93  AREAEKALS------------------------------------AQLAQADTATVYQAQ 116

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +          +     A L+   KD    + L  +N VS+      E     S   L +
Sbjct: 117 AARAVLAIATAQRRKAEADLNLATKDYRRYQELLAENVVSRQVFEANETRFLVSRALLAQ 176

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +++    + ++    +   A     ++R LEQ +    +        +   ++  I
Sbjct: 177 AQGAEESARAGLLQVAMNRDNRDA-----VARKLEQARAAVRE-------AQVFVDESKI 224

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +   +            PL+ I       ++  K+   ++     G  ATV  
Sbjct: 225 RAPFDGIVTT-KYVEEGAMVSTGMPLVAIQDPGDN-WVDLKIRETELDRYPLG--ATVHL 280

Query: 353 PHYADIREKKFKAIIEKID------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
                    +    I  +          +  +        + V ++    +        R
Sbjct: 281 EGRDGRT--RVLGRIADVSHKAEFATYRATDERGETDTVTFNVKIQTDAASV-------R 331

Query: 407 NGF 409
            G 
Sbjct: 332 PGM 334


>gi|310778674|ref|YP_003967007.1| efflux transporter, RND family, MFP subunit [Ilyobacter polytropus
           DSM 2926]
 gi|309747997|gb|ADO82659.1| efflux transporter, RND family, MFP subunit [Ilyobacter polytropus
           DSM 2926]
          Length = 368

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 96/257 (37%), Gaps = 27/257 (10%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDL---------NQQE 220
            +S +   ++ +         L    + L + K  +++   V + D+         N  +
Sbjct: 42  EKSDFEKIVEADGVMEARDTKLVYADESLKVDKLYYDEGDYVEKGDVIMTFDPEDKNTVK 101

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R + K  + L++   + KN  + + ++   +  E  +   +I   L + +  + +E+SK+
Sbjct: 102 RELKKEEINLKKLKRDLKNA-KELLDIGGSSKTEVEDLEFDIETSLLEIE-EYKEELSKM 159

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                      I SP  GTI+       +        L +I   S +  + A V    I 
Sbjct: 160 L--------DEIKSPFNGTIISM-VAEENYRVNTEVELFEIADLSDIIVV-ADVPEYSIN 209

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            V+ G    +    Y     K F+  + KI  + +   ++  +    E  +++ ++   +
Sbjct: 210 GVELGQKVRISPESYK----KTFQGTVSKISTLSTATSSDNSSSAETEAYVEV-EITMEN 264

Query: 401 NNIELRNGFPAEVLFTA 417
              +LR GF  +V    
Sbjct: 265 VPEQLRPGFNVDVEIIT 281



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 57/144 (39%), Gaps = 5/144 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE---TTDLID 97
           E  V + G ++   +   + +  S  + K   + G  + +G  ++TF+  +       + 
Sbjct: 47  EKIVEADG-VMEARDTKLVYADESLKVDKLYYDEGDYVEKGDVIMTFDPEDKNTVKRELK 105

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            +++++K L+  +   K  LD   +    +E      E  LL+ + +Y    SK+ +   
Sbjct: 106 KEEINLKKLKRDLKNAKELLDIGGSSKTEVEDLEFDIETSLLE-IEEYKEELSKMLDEIK 164

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDL 181
           S    ++   +          ++L
Sbjct: 165 SPFNGTIISMVAEENYRVNTEVEL 188


>gi|293604479|ref|ZP_06686884.1| multidrug efflux MFS membrane fusion protein [Achromobacter
           piechaudii ATCC 43553]
 gi|292817060|gb|EFF76136.1| multidrug efflux MFS membrane fusion protein [Achromobacter
           piechaudii ATCC 43553]
          Length = 397

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 82/277 (29%), Gaps = 32/277 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSL-------LRALLSSHQKDLTMMKNLFEK 208
            +      L   + ++R+ Y+    L     L        +A L+  Q D+T  + L + 
Sbjct: 92  ALQQAQAKLAQMVRQVRTYYVQNDALAADVDLRNADILRAQAELTRAQSDVTRRQQLAKS 151

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             VS  ++   E  +  +   L +           +                ++ +    
Sbjct: 152 GGVSGEEILHAEAALKSAQSGLAQARAALAASRAKLATNQALTQGTTVANHPDVLQAAAG 211

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +  +  +            +  + +P+ G I   +S            LM +VP     
Sbjct: 212 LRNAWLAQ-----------SRTVLPAPVGGVIAR-RSVQVGQRVAPGNALMTVVPLD-QV 258

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PIISQQD 378
           ++ A     Q++ ++ G    +    Y      ++   +  +D          P  +   
Sbjct: 259 WVEANFKEGQLRKMRIGQPVKMVADLYGSSV--EYHGKVAGLDAGTGSAFALLPAQNATG 316

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           N ++  +   V + +       + + +      EV  
Sbjct: 317 NWIKVVQRVPVRILLDPEDLKKHPLRVGLSMDVEVDV 353



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 54/158 (34%), Gaps = 1/158 (0%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEIS-VSSSGEILNEDNVVEIKSPF 63
           M       +PA  + + L + + I+  I + I   +  +   S+ +     N+V+I    
Sbjct: 1   MNAATPTTNPARKRLLLLATGVFILIAIAYGIWWVLFGAHFESTDDAYVHGNLVQITPQV 60

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +   + ++   +  G PL+  +  +T   +   +  +  +   + T     D L   
Sbjct: 61  PGTVIAIEADDTETVTAGQPLVRLDPADTDVALQQAQAKLAQMVRQVRTYYVQNDALAAD 120

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            D+        + +L               + G+S   
Sbjct: 121 VDLRNADILRAQAELTRAQSDVTRRQQLAKSGGVSGEE 158


>gi|295665234|ref|XP_002793168.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
 gi|226278082|gb|EEH33648.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb01]
          Length = 1282

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 81/216 (37%), Gaps = 16/216 (7%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           T   ++  K  +   +C + T +  L+    K +  E+  + ++ +L    G   S  S+
Sbjct: 715 TKTDLETTKGELDTTKCDLVTARDELEMKAGKLEDKEEELKDKQGELDTTQGALDSKKSE 774

Query: 152 VFN---------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           +             + +    L+ K + + S+       + +    +A L + + +L+ M
Sbjct: 775 LEAKIAELKGKMSELDAKNTELQAKQSELESVQNELTCKQTELESKQAELDTKEAELSEM 834

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           K        + N+ +++ER    +  E  E I       +   E + +A  +    L + 
Sbjct: 835 KKSHVDELAALNEAHEKER--NAAAQEAAEKIDNLIGEYQQKEEAWQKAREDLEIQLAQR 892

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           + DL Q     A E  ++   E    +  + S I G
Sbjct: 893 AEDLRQ-----AGEEKEILAREGQVREDQLRSAIDG 923



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 22/206 (10%), Positives = 66/206 (32%), Gaps = 7/206 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV-LEKAFESREEQLLDFLGKYHSTC 149
           +    +  ++   K +    +      +F      + ++K      ++     G+     
Sbjct: 444 DQQSHMSAREAEHKQIEAQHEESLMRKEFYIEALQMQMQKTANESAKECSKLKGRITELR 503

Query: 150 SKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            ++       + +  SL         +   R DL+ +   L+  +   ++     + L +
Sbjct: 504 FELGGLQEIQNDIENSLAEAQKENNELSQMREDLQVEIDTLQRAIQEAKEAHE--QELEK 561

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +    Q  L  Q++ +     E++    + +     +     E   E  +   E   + +
Sbjct: 562 QKEKEQEALAIQKQELEGYFEEIKN--EDDRLADEQLKAREKELTDERDSLKAEWEAEKQ 619

Query: 268 QNQRTFADEMSKLTILEKTREQKTIL 293
             +R  A   +K   ++  + Q  + 
Sbjct: 620 ALERAKAALATKYEDVDAKQSQLEVK 645


>gi|126322954|ref|XP_001364193.1| PREDICTED: similar to plectin 11 isoform 1 [Monodelphis domestica]
          Length = 4690

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/191 (10%), Positives = 62/191 (32%), Gaps = 12/191 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
               R  +   ++ L+      +   +A    E +  +   +     ++     + + ++ 
Sbjct: 1494 AEERQRLAEVEAQLEKQRQLAEAHAQAKAQAEREAQELQRRMQEEVARREVVAVDAQHQK 1553

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            L ++    +    + L+++ K+  +     +  +    ++       V +  L   ER  
Sbjct: 1554 LNIQQELQQLRQNSDLEIKAKAQQVEEAERNRLRIEEEIR-------VIRLQLETTERQK 1606

Query: 224  YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              +  EL+      +       +  +EA        +E      Q +R   +E+      
Sbjct: 1607 SGAESELQALRARAEEAELQKKQAQEEAERLRRQVKEE-----SQKKRQAEEELRLKIQA 1661

Query: 284  EKTREQKTILS 294
            E+   ++   +
Sbjct: 1662 EQEAAREKQRA 1672



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 1/134 (0%)

Query: 160  VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQ 218
            +    + +L  + +    +  L    +  +A      ++L   M+    +  V   D   
Sbjct: 1492 LKAEERQRLAEVEAQLEKQRQLAEAHAQAKAQAEREAQELQRRMQEEVARREVVAVDAQH 1551

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            Q+  + +   +LR+N   +        E  +   L     ++ I   LE  +R  +   S
Sbjct: 1552 QKLNIQQELQQLRQNSDLEIKAKAQQVEEAERNRLRIEEEIRVIRLQLETTERQKSGAES 1611

Query: 279  KLTILEKTREQKTI 292
            +L  L    E+  +
Sbjct: 1612 ELQALRARAEEAEL 1625



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 77/212 (36%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR     E++ L     + +      + +EE       
Sbjct: 1594 VIRLQLETTERQKSGAESELQALRAR--AEEAELQKKQAQEEAERLRRQVKEE------S 1645

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +      +     I +   + + K   ++++   RL  E     ++   +  +K+  +  
Sbjct: 1646 QKKRQAEEELRLKIQAEQEAAREKQRALQALEELRLQAEEAERRMKQ--AEVEKERQVQV 1703

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---ANYLK 260
             L      ++ +L  +     + T +L  ++ ++   + H+ E  +    +      + +
Sbjct: 1704 ALETAQRSAEVELQSKRMSFAEKTAQLELSLKQEHITVTHLQEEAERLKRQQAEAERFRE 1763

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  ++LE+ +    D +      E+   QKT+
Sbjct: 1764 EAEKELEKWRAKANDALRMRLQAEEIAHQKTL 1795



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 72/222 (32%), Gaps = 16/222 (7%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                +  +  K          +  +  L+    K +   +     EE             
Sbjct: 1742 THLQEEAERLKRQQAEAERFREEAEKELEKWRAKANDALRMRLQAEEIAHQKTLAQEEAE 1801

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR---ALLSSHQKDLTMMKNLF 206
             +  +    +  RS K + + +R   L   +LE +  L         S +++L  +K   
Sbjct: 1802 KQKEDAEREARKRS-KAEESALRQKELAEQELEKQRKLAEGTAQQKLSAEQELIRLKAET 1860

Query: 207  EKN-----------AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            E                +N++++  +   +   EL +   E + +L    +  +E+    
Sbjct: 1861 ENGEQQRLLLEEELFRLKNEVSEAIQKRKEVEEELAKVRAEMEILLESKAKTEEESRSTS 1920

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                + +  +     R  A+E ++L  L +  +++  L+   
Sbjct: 1921 EKSKQRLEAE-ASKFRELAEEAARLRALSEEAKRQRQLAEED 1961



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 66/193 (34%), Gaps = 8/193 (4%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            + ++   +  L+  I+ E   L   +          E+ + + +       S  ++    
Sbjct: 2371 VKIQMEELVKLKARIEEENKMLILKDKDNTQKFLVEEAEKMKQVAEEAARLSVEAQEAAR 2430

Query: 156  GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QN 214
                    L  +      +   ++    +++ L+A     QK     K+L +++A   Q 
Sbjct: 2431 LRKLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAEMLQKQ----KDLAQEHAKKLQE 2486

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY---LKEISRDLEQNQR 271
            D +Q E+ + + T   ++ +  ++     ++   +   L          +   D  + ++
Sbjct: 2487 DKDQMEQRLAQETEGFQKTLEAERRRQLEMSAEAERLKLHVTEMSLAQAKAEEDARKFKK 2546

Query: 272  TFADEMSKLTILE 284
               +   KL   E
Sbjct: 2547 QAEEIGEKLHRTE 2559



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 65/218 (29%), Gaps = 18/218 (8%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            E+     L + +    + L       K+ ++          ++   R++ L+D   K   
Sbjct: 2000 ENERLRRLAEDEAYQRRLLEEQAAQHKADIEEKIALLKKSSESELERQKGLVDDTLKQRR 2059

Query: 148  TCS----------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL-----L 192
                         +  + G + +   L    +    I  ++   E ++   R L      
Sbjct: 2060 IIEEEIRILKINFEKASAGKTDLELELGRIKSSAEEIQRSKEQAEQEAEKQRQLALEEEQ 2119

Query: 193  SSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               + +  + K L  +   ++     L + ER+  K     R+    +K   R I    +
Sbjct: 2120 RRREAEEKVKKILAAEQEAARQRKAALEEVERLKAKVEEAKRQKELAEKESERQIQLAEE 2179

Query: 250  EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             A        K     ++Q ++       +   +    
Sbjct: 2180 AAQKRLQAEEKAHVFAVQQKEQELLQTRRQEQSVLDKL 2217


>gi|121602670|ref|YP_988434.1| putative macrolide-specific efflux protein MacA [Bartonella
           bacilliformis KC583]
 gi|120614847|gb|ABM45448.1| putative macrolide-specific efflux protein MacA [Bartonella
           bacilliformis KC583]
          Length = 399

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 72/225 (32%), Gaps = 27/225 (12%)

Query: 212 SQNDLNQQERIVYKSTLELREN---IHEQKNMLRHINELYDEANLEFANYLKEI------ 262
            +NDL +++ ++  S   L E    + + +  L+    +  E  +   N+   +      
Sbjct: 108 QENDLKRKKSVLSNSQARLAEQESYLQQAQETLKRQEGMIKEHAISRVNFDDAVVQVKIR 167

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + Q Q   A     +   E       + +P  GT++             SQ    IV
Sbjct: 168 EAQVAQLQEQVAQARIDVDSAEVNLSYTRVTAPAKGTVLA-TVVEEGQNINASQSAPTIV 226

Query: 323 PHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII----------EKI 370
                    I+A+++   I  V+ G     +       R +     +          E I
Sbjct: 227 ILGDLSKMTIKAQISEADILKVRAGQPLYFKVLGNPQRRYEGKLETVEPAPESIRMDESI 286

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +P +        +  YY  ++ +      + +  LR    A++  
Sbjct: 287 NPGMGTSSALSSSAVYYNALVHVD-----NEDNFLRTYMTAQMHI 326



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 65/170 (38%), Gaps = 13/170 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V +SG +     +V + +  +G +    V  G+ + +G  L   +  +  + +  K
Sbjct: 57  IEDTVLASGLVRPY-RLVAVGARVTGRVVAMHVTPGAIVQEGDLLAEIDSTDQENDLKRK 115

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  + N +  +            +   L++A E+ + Q  + + K H+     F+  +  
Sbjct: 116 KSVLSNSQARL----------AEQESYLQQAQETLKRQ--EGMIKEHAISRVNFDDAVVQ 163

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           V             +   R+D+++    L     +     T++  + E+ 
Sbjct: 164 VKIREAQVAQLQEQVAQARIDVDSAEVNLSYTRVTAPAKGTVLATVVEEG 213


>gi|159186488|ref|NP_396027.2| Curdlan synthesis protein [Agrobacterium tumefaciens str. C58]
 gi|159141548|gb|AAK90468.2| Curdlan synthesis protein [Agrobacterium tumefaciens str. C58]
          Length = 397

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 60/366 (16%), Positives = 129/366 (35%), Gaps = 23/366 (6%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I++P +G I+      G+Q+ +G PL + ED    D I L  + ++      + ++   
Sbjct: 40  TIRAPIAGKIELISRPLGAQVARGDPLGSLED-PLVDGIRLLDLELQQADAQTEIKR--- 95

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                  + +  +F+   +QL      Y     +       S   S      R++   L+
Sbjct: 96  ------LETVVTSFDESIDQLQTRAAIYREERKRQLAAQAQSADASRAASEARLKYAELS 149

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA--VSQNDLNQQERIVYKSTLELRENIH 235
           R     +SS L     S  + L   ++L E +A  V+       E +V +   E    + 
Sbjct: 150 R----ERSSRLSGQGISTAQSLEQAQSLSEVSALEVANAKAQAAEIVVAQKAAERGVFLG 205

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           +  N   +  +   E +++      ++    +      +D ++   +         + + 
Sbjct: 206 DGFNDAPYSEQRISEIDVQRLELKAQLEAK-KLALTAISDRLANERLRVNRLSSSDLAAN 264

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           + G +    S +S    Q+ Q LM+++       +   V+      ++ G  AT R    
Sbjct: 265 VNGALWEYLS-ASGETVQRGQDLMRLI-DCDSAIVTLSVSESVYNSLRVGAPATFRLNRS 322

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEY---YEVILKITDLAFSDNNIELRNGFPAE 412
             + +     +       I +      +Q +   Y+V L +  L   D ++    G    
Sbjct: 323 RQVLQGSVIRLAGSGAATIYENMAIAPSQRHLQRYDVALDVPAL-RDDPDLRCLAGRTGR 381

Query: 413 VLFTAK 418
           V F  +
Sbjct: 382 VFFETR 387


>gi|304412030|ref|ZP_07393640.1| secretion protein HlyD family protein [Shewanella baltica OS183]
 gi|307305925|ref|ZP_07585671.1| secretion protein HlyD family protein [Shewanella baltica BA175]
 gi|304349580|gb|EFM13988.1| secretion protein HlyD family protein [Shewanella baltica OS183]
 gi|306911418|gb|EFN41844.1| secretion protein HlyD family protein [Shewanella baltica BA175]
          Length = 287

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 20/170 (11%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           I+ +L +     A   ++L   +    +  I +P  GT++     +  NY  +   +  +
Sbjct: 126 INTELARTSYELAQ--AQLNTAQIDLARTQIHAPENGTLINLSLRN-GNYVSKGNSVFSL 182

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V      YI       +I  V  G  A V                +  I   I+  +   
Sbjct: 183 VKQDS-LYITGYFEETKIPLVHIGQNADVSL----MSGGHVLHGKVTSIGKAIANTNVTT 237

Query: 382 QTQEYYEV-----------ILKIT-DLAFSDNNIELRNGFPAEVLFTAKN 419
             Q   ++            + +   L     +IEL  G    +      
Sbjct: 238 NGQLLPQIGQTFNWVRLSQRIPVDIQLDSIPKDIELSVGMTVSIQLQTDK 287



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 51/150 (34%), Gaps = 7/150 (4%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + ++++ GI G   WS    +    +  G +  E  ++ I    SG + +  V++   + 
Sbjct: 11  LIVVAVAGIAGHWIWSHY--LYSPWTRDGRVRAE--IITIAPDVSGWVNQLNVKDNQIVN 66

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREE 136
           +G  L T +D      I       ++ +   +  K        L N   V ++ F+    
Sbjct: 67  KGDVLFTVDDTRYKATIAELNAKAESQKLAWELAKHKYKRRIGLTNDNLVSKETFDEAFI 126

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
                   Y    +++    I      +  
Sbjct: 127 NTELARTSYELAQAQLNTAQIDLARTQIHA 156


>gi|295134361|ref|YP_003585037.1| RND family efflux transporter MFP subunit [Zunongwangia profunda
           SM-A87]
 gi|294982376|gb|ADF52841.1| RND family efflux transporter MFP subunit [Zunongwangia profunda
           SM-A87]
          Length = 354

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 44/148 (29%), Gaps = 16/148 (10%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               LEQ +    +  S L       E   I + I G I      +          L +I
Sbjct: 137 TQEQLEQMKLQLDNAKSSLENANLDIEDTRIKASINGVINKKFVET-GAVVNTGTSLFEI 195

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V       +R  V   Q+ +++ G  A ++   Y D     F   +  +        N  
Sbjct: 196 V-DITTLKLRVSVPELQVSNIRAGQEAQIQLNVYPDTT---FTGSVSFVAAKADGSLN-- 249

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGF 409
                + V + + +         ++ G 
Sbjct: 250 -----FPVEITLQNSQVH----PIKAGM 268



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 40/120 (33%), Gaps = 5/120 (4%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G    E  +  +    SG I K  V+ G Q+ +G  L   +  +          + +N  
Sbjct: 63  GTFKPEQEL-IVTPETSGTILKIMVKEGDQVRKGQTLAYLKKDQANVFYQNANANYENAL 121

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            + +  + A         V ++  E  + QL +      +    + +  I +    +  K
Sbjct: 122 ENYERYQRAYKT----GGVTQEQLEQMKLQLDNAKSSLENANLDIEDTRIKASINGVINK 177


>gi|161523167|ref|YP_001586096.1| RND family efflux transporter MFP subunit [Burkholderia multivorans
           ATCC 17616]
 gi|160346720|gb|ABX19804.1| efflux transporter, RND family, MFP subunit [Burkholderia
           multivorans ATCC 17616]
          Length = 323

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 74/223 (33%), Gaps = 27/223 (12%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + +      ER+   +  + R  + + K       +L    NL  +  ++E    +EQ 
Sbjct: 79  VIDRARYALAERLAEATLAQRRATLAQAKREYARNLQLG---NLVASEQVEESRTRVEQG 135

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +    D    L   +   ++ T++SP+ G  + +++     Y    + ++ +V       
Sbjct: 136 EAAVQDAQVSLDTAKLNLQRTTVVSPVDGY-LNDRAPRVGEYVPAGRAVLSVV-DRNSFR 193

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----- 384
           +       +++ +  G    +    +        +  ++ I   I  +D    +      
Sbjct: 194 VDGYFEETKLRGIHIGQPVDI----FVMGEPHSLRGHVQSIVAAIEDRDRTQGSNLLPNV 249

Query: 385 ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                     +   V + + ++    ++  +  G  A V   A
Sbjct: 250 NPAFSWVRLAQRVPVRVALDEV---PDDFRMIAGRTATVAVRA 289



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 6/118 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++    SG+I   +V +   + +G  L   +         L + ++   R  + 
Sbjct: 45  VRADVIQVAPDVSGLITSVEVADNQAVTRGQVLFVIDRARYALAERLAEATLAQRRATLA 104

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             K            L+       EQ+ +   +     + V +  +S     L ++ T
Sbjct: 105 QAKREYAR------NLQLGNLVASEQVEESRTRVEQGEAAVQDAQVSLDTAKLNLQRT 156


>gi|90569605|gb|ABD94676.1| HlyD/EmrA family membrane protein [Pseudomonas aeruginosa]
          Length = 359

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/374 (11%), Positives = 119/374 (31%), Gaps = 81/374 (21%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + +  PA   R+ +L +  I  ++   ++  +E +  S+ +     + +++    +G I 
Sbjct: 1   MTQTVPARRSRLPVLLLTLICLVMLGYVIHRLETA-PSTDDAYVYADTIDVVPEVNGRII 59

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V +   + QG  LL  +               +  R  +   +++L  L+ + ++ +
Sbjct: 60  ELPVRDNQLVRQGDLLLRIDP--------------RPYRDALAQARASLITLDRQIELTQ 105

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           ++  ++E +    +       ++    G                                
Sbjct: 106 RSVNAQEYEAASAVAAVERARAQAKQAG-------------------------------- 133

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                     L  ++ L     VS   ++Q       +  EL     + +     ++ + 
Sbjct: 134 --------DTLRRLEKLLPGGYVSAESVDQARTAQRSTGAELNSARLQAQRAAAAVSGVD 185

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                                    A+  +++ I E   E   + +P  G +   ++ + 
Sbjct: 186 ALVAQR-------------------AEIEAQIAIAELNLEFTEVRAPFDGRVAALRT-TV 225

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-FKAII 367
             +A   +P+  ++       I A      ++ ++ G  AT+    Y      + F+  +
Sbjct: 226 GQFASAYKPVFTLIDACHWYVI-ANFRETDLKDIRAGTPATL----YLLSDTGRHFRGRV 280

Query: 368 EKIDPIISQQDNNL 381
           + I   ++  D   
Sbjct: 281 DSISYGVTPDDGGT 294


>gi|326385740|ref|ZP_08207369.1| secretion protein HlyD family protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326209719|gb|EGD60507.1| secretion protein HlyD family protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 329

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 64/176 (36%), Gaps = 15/176 (8%)

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           ++A       +     ++   +   A   ++L +L+   +Q  +++P  G +V ++    
Sbjct: 162 EQAQALRLARIGPREEEIAGARAQVASAQAQLALLQHQIDQGHLVAPSDG-VVRSRLLQP 220

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            + A   +P+  +   +   ++R  V    +  ++ G  A V       +  +     I 
Sbjct: 221 GDQATPQKPVFNLA-LTHPKWVRVYVPEPDLGRIRMGLPAKV---TTDSMPGQYVSGRIG 276

Query: 369 KIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            I  +      S +  +L+T   YEV + + D         LR G P        +
Sbjct: 277 YISSVSEFTPKSVETEDLRTSLVYEVRVWVDDP-----GNRLRLGQPVTATLETGS 327


>gi|322831472|ref|YP_004211499.1| efflux pump membrane protein [Rahnella sp. Y9602]
 gi|321166673|gb|ADW72372.1| efflux pump membrane protein [Rahnella sp. Y9602]
          Length = 391

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 86/259 (33%), Gaps = 22/259 (8%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS------TLELR 231
               E   + L   +    + +   K      A+ Q  L Q +  + +           R
Sbjct: 99  EQAFERSKTALANSVRQTHQLIINGKQYQANIALRQTQLQQAQTDLKRRIVLGNVDAIGR 158

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E +   ++ +      YD A  ++      I       Q       +++       ++  
Sbjct: 159 EELQHARDAVDTAKAQYDVAVQQYNANQAMILDTPVDKQPQVLQAAAQVRDAWLALQRTK 218

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + SP+ G +   ++         +  LM +VP     ++ A     Q+ +++ G  ATV 
Sbjct: 219 VRSPVDGFVSR-RAVQIGQQISPTTSLMAVVPAHH-IWVDANFKETQLANMRIGQVATVV 276

Query: 352 FPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFSDN 401
              Y D    K+   +  +D          P  +   N ++  +   V +++ D   +++
Sbjct: 277 SDMYGDDV--KYHGKVVGMDMGTGGAFSLLPAQNATGNWIKVVQRLPVRIELNDQEVAEH 334

Query: 402 NIELRNGFPAEVLFTAKNT 420
            + +  G    V    +N 
Sbjct: 335 PLRI--GLSTLVTVDTQNR 351



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/175 (10%), Positives = 59/175 (33%), Gaps = 10/175 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-- 109
              N V+I +  SG +     ++   + +G  L+T +  +     +  K ++ N      
Sbjct: 58  VAGNQVQIMAQVSGSVTDVNFDSTDFVKKGDVLVTLDPTDAEQAFERSKTALANSVRQTH 117

Query: 110 ---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              I+ ++   +    +  + +   + +   +L  +        +     + +      +
Sbjct: 118 QLIINGKQYQANIALRQTQLQQAQTDLKRRIVLGNVDAIGREELQHARDAVDTAKAQYDV 177

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDL 216
            + +  +     LD  ++ +  +L+A        L + +          VS+  +
Sbjct: 178 AVQQYNANQAMILDTPVDKQPQVLQAAAQVRDAWLALQRTKVRSPVDGFVSRRAV 232


>gi|301773440|ref|XP_002922143.1| PREDICTED: plectin-1-like [Ailuropoda melanoleuca]
          Length = 4302

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 11/226 (4%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE- 135
            Q+ Q    L  +  ET     +    ++ L+  +       +    +  V E+ F  R  
Sbjct: 2025 QVEQELTTLRLQLEETDHQKSILDEELQRLKAEVT------EAARQRSQVEEELFSVRVQ 2078

Query: 136  -EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             E+L     +  +    +      +  R L+ +  +M+ +      L   +     L   
Sbjct: 2079 MEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQL 2138

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++DL   + L EK    +    Q+   +      L++     +   R + E  ++   +
Sbjct: 2139 AEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKEQMAQQ 2198

Query: 255  FANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             A   +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2199 LAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2244



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2074 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2133

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2134 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARQLQEDKE 2193

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2194 QMAQQLAQETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2253

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2254 EIGEKLHRTELATQEKVTLVHTLEIQRQQSD 2284



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 67/210 (31%), Gaps = 12/210 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY--DVLEKAFESREEQLLDFLGKYHS- 147
            E   L      +IK+    + T K+ L+ + +      ++   ES  ++ +D   +Y   
Sbjct: 1186 ECQRLAKQYINAIKDYELQLVTYKAQLEPVASPAKKPKVQSGSESIIQEYVDLRTRYSEL 1245

Query: 148  ----TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +    F           +  +   +     + +L++      A + +  + +   +
Sbjct: 1246 TTLTSQYVKFISDTLRRMEEEEAAVDAQQQKRSIQEELQHLRQSSEAEIQAKARQVEAAE 1305

Query: 204  N----LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                 + E+  V +  L   ER    +  EL+      +       +  DEA        
Sbjct: 1306 RSRLRIEEEIRVVRLQLETTERQRGGAEGELQALRARAEEAEAQKRQAQDEAERLRRQVQ 1365

Query: 260  KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E  R   Q +   A  +       + +++
Sbjct: 1366 DENQRK-RQAEAELALRVKAEADAAREKQR 1394



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1481 EALRLRLQGEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1540

Query: 164  LKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1541 LAEGTAQQRLVAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1597

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1598 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEASRF--------RELAEEAARLRA 1649

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1650 LAEETKRQRQLAEED 1664



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 68/213 (31%), Gaps = 11/213 (5%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             Q    +    +  +  +  +    K L   I+     ++           A +  E QL
Sbjct: 1146 KQRQEQIQAVPLADSQAVREQLRQEKALLEEIERHGEKVEECQRLAKQYINAIKDYELQL 1205

Query: 139  LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            + +  +     S      + S   S+  +   +R+ Y     L ++     +        
Sbjct: 1206 VTYKAQLEPVASPAKKPKVQSGSESIIQEYVDLRTRYSELTTLTSQYVKFIS-------- 1257

Query: 199  LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               ++ + E+ A    D  QQ+R + +    LR++   +        E  + + L     
Sbjct: 1258 -DTLRRMEEEEAA--VDAQQQKRSIQEELQHLRQSSEAEIQAKARQVEAAERSRLRIEEE 1314

Query: 259  LKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++ +   LE  +R       +L  L    E+  
Sbjct: 1315 IRVVRLQLETTERQRGGAEGELQALRARAEEAE 1347



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 68/209 (32%), Gaps = 13/209 (6%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++  + + ++       R      +S       K   LE+  +     +     +     
Sbjct: 1396 LQALEELRVQVALETAQRSAEAELQSKRASFAEKTAQLERTLQEEHVAVAQLREEAERRA 1455

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL---- 205
             +      +      +++  R+++    RL L+ +    +  L+  + +    +      
Sbjct: 1456 QQQAEAERAREEAEQELERWRLKANEALRLRLQGEEVAQQKSLAQAEAEKQKEEAEREAR 1515

Query: 206  ----FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
                 E+ AV Q +L +QE    +   E       Q+ ++     +   A  E     ++
Sbjct: 1516 RRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLVAEQELIRLRAETEQGEQQRQ 1571

Query: 262  -ISRDLEQNQRTFADEMSKLTILEKTREQ 289
             +  +L + QR  A    K   LE    +
Sbjct: 1572 LLEEELARLQREAAAATQKRQELEAELAK 1600



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 64/204 (31%), Gaps = 12/204 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E T L    ++++K      +  +   +    +   LE       EQ            +
Sbjct: 1685 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLE-------EQAAQHKADIEERLA 1737

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYL---NRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            ++     S + R   +    +R         L L+       A  +  + +L  +++  E
Sbjct: 1738 QLRKASESELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSDAE 1797

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                S+     +     +   +  +   E +  ++      +EA  +  + L+E+ R   
Sbjct: 1798 DTLRSKEQAELEAARQRQLAADEEQRRREAEERVQKSLAAEEEAARQRKSALEEVERLKA 1857

Query: 268  --QNQRTFADEMSKLTILEKTREQ 289
              +  R   +   + +  +    +
Sbjct: 1858 KVEEARRLRERAEQESARQLQLAR 1881


>gi|285019493|ref|YP_003377204.1| membrane fusion protein [Xanthomonas albilineans GPE PC73]
 gi|283474711|emb|CBA17210.1| probable membrane fusion protein [Xanthomonas albilineans]
          Length = 410

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/135 (10%), Positives = 43/135 (31%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +++G +     V  +     G +       G ++ +G  L   +        D    S 
Sbjct: 60  ATATGTVTALSTV-TVNPQVGGQLLSLNFREGQEVKKGDLLAQIDPRSLQASYDQAAASK 118

Query: 104 KNLRCHIDTEKS---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +S     D    +  V +   +++  Q+  +     +  +++    +   
Sbjct: 119 RQNQALLATARSTFQRSDTPAYRQYVAKTDLDTQRNQVAQYEAAVAANDAQMRAAQVQLQ 178

Query: 161 YRSLKMKLTRMRSIY 175
           Y  +      +  + 
Sbjct: 179 YTRILAPNDGLTGLR 193


>gi|239834665|ref|ZP_04682993.1| Conserved hypothetical protein [Ochrobactrum intermedium LMG 3301]
 gi|239822728|gb|EEQ94297.1| Conserved hypothetical protein [Ochrobactrum intermedium LMG 3301]
          Length = 336

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 75/214 (35%), Gaps = 16/214 (7%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIG------LITWSILLPIEISVSSSGEILNEDNVVEIK 60
              KR+    L RM  L ++ +        LI    +L I+ +V              + 
Sbjct: 14  DAQKRSSSGKLGRMIYLGLVFVFLGSLAYYLIGNMFVLSIDGTVL--------KERYLVS 65

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           + + G + +  V+ G ++  GT L   E  E    +        +L       +  L  +
Sbjct: 66  ANYPGKVTEVFVKEGDEVQAGTQLARIESFEMIQELANIAFRDSDLAIREGQLQGKLGSI 125

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
              + + E+   +RE +         S    V +       R+      R+  +   +  
Sbjct: 126 TAVFPLAER--TARETKGTSSQFDTVSGKGIVSSLAKDDALRNSLQAAERVAQLQSEKAA 183

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
            EN+  LL+   + +++ +  +  ++++  +  +
Sbjct: 184 TENELKLLQQSRAIYRQAMDKLNGIYDQGFLRAS 217



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 80/235 (34%), Gaps = 13/235 (5%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           + +           G           +  + +I     DL  +   L+  L S    +T 
Sbjct: 72  VTEVFVKEGDEVQAGTQLARIESFEMIQELANIAFRDSDLAIREGQLQGKLGS----ITA 127

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +  L E+ A      + Q   V      +  ++ +   +   +      A L+      E
Sbjct: 128 VFPLAERTARETKGTSSQFDTVSGKG--IVSSLAKDDALRNSLQAAERVAQLQSEKAATE 185

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               L Q  R        +  L    +Q  + + +AGT+   +        + S  LM+I
Sbjct: 186 NELKLLQQSRAI--YRQAMDKLNGIYDQGFLRASMAGTV-GAKVPLPGQVVKFSDELMQI 242

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
             +   +YI A +  + + +V+KG T  V     A   + K + I+   D + ++
Sbjct: 243 --NGGESYILAYLPDEYLFNVRKGMTVNV--SGGAQSAKGKIETILTVADALPAE 293


>gi|330820729|ref|YP_004349591.1| multidrug resistance protein MdtN [Burkholderia gladioli BSR3]
 gi|327372724|gb|AEA64079.1| multidrug resistance protein MdtN [Burkholderia gladioli BSR3]
          Length = 349

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 72/197 (36%), Gaps = 9/197 (4%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P +  R+  L+I+ ++G+   +       +  S+ +   + +VV + SP  G I +  V 
Sbjct: 9   PCAKGRLIALAIV-VLGIAALAYAWHRTTAYPSTDDASIDADVVHVASPVGGRIVRLAVH 67

Query: 74  NGSQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
              ++ +G  L   + +       +    ++L + S+   R  +  E++       + + 
Sbjct: 68  ENQRVAKGALLYEIDPVPYRLTVAQAQADLELAQASLATRRRSLIGERANATVAAEQVER 127

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             + ++     + + L    +           +  R     ++  ++    R   +    
Sbjct: 128 ATQNYDLATRDV-NRLAPLAAQAYVSAQQFDQAKVRQRDAAVSLAQAREQQRASAQTIGD 186

Query: 187 LLRALLSSHQKDLTMMK 203
              A+ + H ++  + +
Sbjct: 187 EADAIATLHAREAALAR 203



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 70/258 (27%), Gaps = 26/258 (10%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V E    ++   L +     +          +     SL  +   +     N     
Sbjct: 63  RLAVHENQRVAKGALLYEIDPVPYRLTVAQAQADLELAQASLATRRRSLIGERANATVAA 122

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +            +D+  +  L  +  VS    +Q +     + + L +   +Q+   +
Sbjct: 123 EQVERATQNYDLATRDVNRLAPLAAQAYVSAQQFDQAKVRQRDAAVSLAQAREQQRASAQ 182

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I                    D      T     + L   +   +   + +P  G +  
Sbjct: 183 TIG-------------------DEADAIATLHAREAALARAQHALDDTVVRAPHDGLVTG 223

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REK 361
                       +Q +  ++  S+   +        +  +  G  ATV    Y+ I R +
Sbjct: 224 LSVL-EGETLAPNQSIFTLIDASEWFAV-GNFRETSLNRIAVGDCATV----YSMIDRGR 277

Query: 362 KFKAIIEKIDPIISQQDN 379
                +  I   I+  D 
Sbjct: 278 AMTGKVVGIGAGIADSDR 295


>gi|126322958|ref|XP_001364346.1| PREDICTED: similar to plectin 11 isoform 3 [Monodelphis domestica]
          Length = 4553

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/191 (10%), Positives = 62/191 (32%), Gaps = 12/191 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
               R  +   ++ L+      +   +A    E +  +   +     ++     + + ++ 
Sbjct: 1357 AEERQRLAEVEAQLEKQRQLAEAHAQAKAQAEREAQELQRRMQEEVARREVVAVDAQHQK 1416

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            L ++    +    + L+++ K+  +     +  +    ++       V +  L   ER  
Sbjct: 1417 LNIQQELQQLRQNSDLEIKAKAQQVEEAERNRLRIEEEIR-------VIRLQLETTERQK 1469

Query: 224  YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              +  EL+      +       +  +EA        +E      Q +R   +E+      
Sbjct: 1470 SGAESELQALRARAEEAELQKKQAQEEAERLRRQVKEE-----SQKKRQAEEELRLKIQA 1524

Query: 284  EKTREQKTILS 294
            E+   ++   +
Sbjct: 1525 EQEAAREKQRA 1535



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 1/134 (0%)

Query: 160  VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQ 218
            +    + +L  + +    +  L    +  +A      ++L   M+    +  V   D   
Sbjct: 1355 LKAEERQRLAEVEAQLEKQRQLAEAHAQAKAQAEREAQELQRRMQEEVARREVVAVDAQH 1414

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            Q+  + +   +LR+N   +        E  +   L     ++ I   LE  +R  +   S
Sbjct: 1415 QKLNIQQELQQLRQNSDLEIKAKAQQVEEAERNRLRIEEEIRVIRLQLETTERQKSGAES 1474

Query: 279  KLTILEKTREQKTI 292
            +L  L    E+  +
Sbjct: 1475 ELQALRARAEEAEL 1488



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 77/212 (36%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR     E++ L     + +      + +EE       
Sbjct: 1457 VIRLQLETTERQKSGAESELQALRAR--AEEAELQKKQAQEEAERLRRQVKEE------S 1508

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +      +     I +   + + K   ++++   RL  E     ++   +  +K+  +  
Sbjct: 1509 QKKRQAEEELRLKIQAEQEAAREKQRALQALEELRLQAEEAERRMKQ--AEVEKERQVQV 1566

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---ANYLK 260
             L      ++ +L  +     + T +L  ++ ++   + H+ E  +    +      + +
Sbjct: 1567 ALETAQRSAEVELQSKRMSFAEKTAQLELSLKQEHITVTHLQEEAERLKRQQAEAERFRE 1626

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  ++LE+ +    D +      E+   QKT+
Sbjct: 1627 EAEKELEKWRAKANDALRMRLQAEEIAHQKTL 1658



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 72/222 (32%), Gaps = 16/222 (7%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                +  +  K          +  +  L+    K +   +     EE             
Sbjct: 1605 THLQEEAERLKRQQAEAERFREEAEKELEKWRAKANDALRMRLQAEEIAHQKTLAQEEAE 1664

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR---ALLSSHQKDLTMMKNLF 206
             +  +    +  RS K + + +R   L   +LE +  L         S +++L  +K   
Sbjct: 1665 KQKEDAEREARKRS-KAEESALRQKELAEQELEKQRKLAEGTAQQKLSAEQELIRLKAET 1723

Query: 207  EKN-----------AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            E                +N++++  +   +   EL +   E + +L    +  +E+    
Sbjct: 1724 ENGEQQRLLLEEELFRLKNEVSEAIQKRKEVEEELAKVRAEMEILLESKAKTEEESRSTS 1783

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                + +  +     R  A+E ++L  L +  +++  L+   
Sbjct: 1784 EKSKQRLEAE-ASKFRELAEEAARLRALSEEAKRQRQLAEED 1824



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 66/193 (34%), Gaps = 8/193 (4%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            + ++   +  L+  I+ E   L   +          E+ + + +       S  ++    
Sbjct: 2234 VKIQMEELVKLKARIEEENKMLILKDKDNTQKFLVEEAEKMKQVAEEAARLSVEAQEAAR 2293

Query: 156  GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QN 214
                    L  +      +   ++    +++ L+A     QK     K+L +++A   Q 
Sbjct: 2294 LRKLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAEMLQKQ----KDLAQEHAKKLQE 2349

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY---LKEISRDLEQNQR 271
            D +Q E+ + + T   ++ +  ++     ++   +   L          +   D  + ++
Sbjct: 2350 DKDQMEQRLAQETEGFQKTLEAERRRQLEMSAEAERLKLHVTEMSLAQAKAEEDARKFKK 2409

Query: 272  TFADEMSKLTILE 284
               +   KL   E
Sbjct: 2410 QAEEIGEKLHRTE 2422



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 65/218 (29%), Gaps = 18/218 (8%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            E+     L + +    + L       K+ ++          ++   R++ L+D   K   
Sbjct: 1863 ENERLRRLAEDEAYQRRLLEEQAAQHKADIEEKIALLKKSSESELERQKGLVDDTLKQRR 1922

Query: 148  TCS----------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL-----L 192
                         +  + G + +   L    +    I  ++   E ++   R L      
Sbjct: 1923 IIEEEIRILKINFEKASAGKTDLELELGRIKSSAEEIQRSKEQAEQEAEKQRQLALEEEQ 1982

Query: 193  SSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               + +  + K L  +   ++     L + ER+  K     R+    +K   R I    +
Sbjct: 1983 RRREAEEKVKKILAAEQEAARQRKAALEEVERLKAKVEEAKRQKELAEKESERQIQLAEE 2042

Query: 250  EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             A        K     ++Q ++       +   +    
Sbjct: 2043 AAQKRLQAEEKAHVFAVQQKEQELLQTRRQEQSVLDKL 2080


>gi|77460882|ref|YP_350389.1| secretion protein HlyD [Pseudomonas fluorescens Pf0-1]
 gi|77384885|gb|ABA76398.1| putative exported protein [Pseudomonas fluorescens Pf0-1]
          Length = 386

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 49/134 (36%), Gaps = 6/134 (4%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   + V ++    GI+ K  V+ G  + QG  L T +D      +D  +  +   +  +
Sbjct: 61  VLSLHSVVVRPQIDGILTKLLVKEGQLVKQGDLLATIDDRSIRASLDQARAQLGESQAQL 120

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV-YRSLKMKLT 169
                 +  +N K   L    +   +Q  D      +          +++    +++  T
Sbjct: 121 Q-----VALVNLKRYKLLSVDDGVSKQTYDQQQALVNQLKATAQGNQAAIDAAQVQLSYT 175

Query: 170 RMRSIYLNRLDLEN 183
           ++RS    R+ +  
Sbjct: 176 QIRSPVTGRVGIRT 189



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 81/249 (32%), Gaps = 30/249 (12%)

Query: 187 LLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQ--ERIVYKSTLELRENIHEQKNMLRH 243
            L +++   Q D  + K L ++   V Q DL     +R +  S  + R  + E +  L+ 
Sbjct: 63  SLHSVVVRPQIDGILTKLLVKEGQLVKQGDLLATIDDRSIRASLDQARAQLGESQAQLQV 122

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEM--------SKLTILEKTREQKTILSP 295
              L +    +  +    +S+     Q+   +++        + +   +       I SP
Sbjct: 123 --ALVNLKRYKLLSVDDGVSKQTYDQQQALVNQLKATAQGNQAAIDAAQVQLSYTQIRSP 180

Query: 296 IAGTIVYNQSFSSSNYAQQSQ-----PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           + G +   ++    N+ + +       + +I P +    +  ++ P     +     A V
Sbjct: 181 VTGRV-GIRTVDEGNFLRMTDTQGLFTVTQIDPIAVEFSLPQQMLPTLQGLISDPQRAQV 239

Query: 351 R--FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           +       D            +  I +Q + N  T              F + N +L  G
Sbjct: 240 KAYIGADTDGETGNLLGE-GHLTLIDNQINANTGTIR--------AKAEFDNPNQKLWPG 290

Query: 409 FPAEVLFTA 417
               V    
Sbjct: 291 LLVTVKIQT 299


>gi|325914506|ref|ZP_08176850.1| RND family efflux transporter, MFP subunit [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325539276|gb|EGD10928.1| RND family efflux transporter, MFP subunit [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 414

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 49/126 (38%), Gaps = 3/126 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +    +  + +  +G +++  +E G ++ QG  + T + ++      L    +   R  +
Sbjct: 79  VVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDADAQRTLSASQLSAARSQV 138

Query: 111 DTEKSALDFLNNKYDVLEKAFESR---EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           D  ++ L   N     L     ++     Q      + ++  +++ N   +    S ++ 
Sbjct: 139 DNMQAQLAVANADAARLRSLVGAQLVSRSQYEQATAQRNALRAQLQNAQRNVQVASDQLA 198

Query: 168 LTRMRS 173
           +  +RS
Sbjct: 199 IAGIRS 204



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 76/270 (28%), Gaps = 34/270 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V    +++V   +  K+  +      R++     + L  L +  Q+ L+  +    ++ V
Sbjct: 79  VVARRMATVSAQVTGKVREVMIEEGMRVEQGQVMATLDPLDADAQRTLSASQLSAARSQV 138

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
                  Q  +       LR  +  Q        +   + N         +   L+  QR
Sbjct: 139 DNMQ--AQLAVANADAARLRSLVGAQLVSRSQYEQATAQRNA--------LRAQLQNAQR 188

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--------LMKIVP 323
                  +L I     +   + +P AG +V  ++                    +  IV 
Sbjct: 189 NVQVASDQLAIAGIRSDFNVVRAPFAG-VVTAKAAQPGEIVSPLSAGGGFTRTGIGTIV- 246

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             +   I  +V    I  V+           Y + +       +  I P   +       
Sbjct: 247 DMESLEIEVEVGESYIGRVQPKMPVEAVLNAYPEWK---IPGEVIAIIPTADRGKAT--- 300

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                V +++   A    +  +       V
Sbjct: 301 -----VKVRV---ALKLKDPRIVPEMGVRV 322


>gi|291456964|ref|ZP_06596354.1| putative ABC transporter, permease protein [Bifidobacterium breve
           DSM 20213]
 gi|291381375|gb|EFE88893.1| putative ABC transporter, permease protein [Bifidobacterium breve
           DSM 20213]
          Length = 1206

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/222 (9%), Positives = 73/222 (32%), Gaps = 11/222 (4%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +      L     +    +D  +  I + R  ++  ++ L     + +  + +    E
Sbjct: 295 QIVTSAQNTLDAAKADALKQLDEGQQQIDSNRAELEANETKLAESRTQLEQNKASITDGE 354

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q+ +   +  S   ++         + +     ++ S          +    +A L+++
Sbjct: 355 RQIAEGRAQIASARQQIAQGR-----QQIADARAQLESGKAQLTSARQQLDAAQAELTAN 409

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL-- 253
           +  +       ++     + + Q  +       +L  NI    +  + + +L     +  
Sbjct: 410 RSKVEQGIAQIDQGVAQLDQMLQLIQQADDLLSQLDPNIDIDSSTWQTVKQLLTSLGITV 469

Query: 254 ----EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 ++  +++     + Q   +D + K T L++T +   
Sbjct: 470 PDVPSISSLRQQLDAKQNELQSQRSDAIKKKTELQQTLDGTI 511



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 6/202 (2%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
               I   +  I + R  +++ K+ L     + D  +    +   ++   + +     ++
Sbjct: 367 ARQQIAQGRQQIADARAQLESGKAQLTSARQQLDAAQAELTANRSKVEQGIAQIDQGVAQ 426

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +    +  + +     L+++                L   L     D+  + +L ++   
Sbjct: 427 L--DQMLQLIQQADDLLSQLDPNIDIDSSTWQTVKQLLTSLGITVPDVPSISSLRQQLDA 484

Query: 212 SQNDLNQQERIVYKSTLELRE----NIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            QN+L  Q     K   EL++     I   +N L   N        E A    E++  L 
Sbjct: 485 KQNELQSQRSDAIKKKTELQQTLDGTIAPAQNTLDQQNAQLTAKEQEAAAGEAELNAKLA 544

Query: 268 QNQRTFADEMSKLTILEKTREQ 289
           + +   A   ++   LE    Q
Sbjct: 545 ELESNAAQLETRSAQLEAQAAQ 566



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/182 (10%), Positives = 61/182 (33%), Gaps = 11/182 (6%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D     + D  +  I+  R     ++     + +  + L+ A     +QL +   +  S 
Sbjct: 270 DAAIKTVADRIESQIQTQRQKARRQQ----IVTSAQNTLDAAKADALKQLDEGQQQIDSN 325

Query: 149 CSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
            +++      ++     L+     +        +   + +  R  ++  ++ +   +   
Sbjct: 326 RAELEANETKLAESRTQLEQNKASITDGERQIAEGRAQIASARQQIAQGRQQIADARAQL 385

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN--LEFANYLKEISR 264
           E     +  L    + +  +  EL  N  + +  +  I++   + +  L+      ++  
Sbjct: 386 ESG---KAQLTSARQQLDAAQAELTANRSKVEQGIAQIDQGVAQLDQMLQLIQQADDLLS 442

Query: 265 DL 266
            L
Sbjct: 443 QL 444


>gi|224025622|ref|ZP_03643988.1| hypothetical protein BACCOPRO_02362 [Bacteroides coprophilus DSM
           18228]
 gi|224018858|gb|EEF76856.1| hypothetical protein BACCOPRO_02362 [Bacteroides coprophilus DSM
           18228]
          Length = 184

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 54/151 (35%), Gaps = 4/151 (2%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
            H    + +  + +  +   +     + ++ISV  SG +       EI S  + I+    
Sbjct: 18  QHTTKSQIIYWIVLFAVTVTLVALPFIYVDISVQGSGVVRPVAEKAEITSSITEIVDSVF 77

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G Q+ +G  +L F    +   I+ +   + +    +    + L +L         + 
Sbjct: 78  VKEGEQVNKGDVILRFRTNSSDYKINYQTSRLNDCSAQL----ADLAYLAEGDCPNSFSS 133

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
             R+++   F+ K     + +       +  
Sbjct: 134 PVRQQEYAYFIRKKQELETGLAQAEKEYLRN 164


>gi|218677500|ref|ZP_03525397.1| type I secretion membrane fusion protein, HlyD family [Rhizobium
           etli CIAT 894]
          Length = 56

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 387 YEVILKITDLAFSD-NNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +   +++TD   +   ++EL  G PA+ L     +++A   + P+ D++ + F 
Sbjct: 1   FAATIRVTDERLAKMRDVELVAGMPAQTLIETGKSSVALYAVRPLLDSFNRAFR 54


>gi|218441332|ref|YP_002379661.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7424]
 gi|218174060|gb|ACK72793.1| chromosome segregation protein SMC [Cyanothece sp. PCC 7424]
          Length = 1190

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 8/204 (3%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           L  +    T   +   +S+      ++T    L+ L      LE   +  + QL++    
Sbjct: 746 LQKDIDRLTGQKEELTLSLSQNNQELETVTRRLEELTQHIPSLEAQLQQAQRQLIELEAS 805

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              +        I +    L+ +   +R       DLE ++  L   ++  Q+ L  ++N
Sbjct: 806 QTHSEWLEIQAHIKAQETQLQQQEHTLRQAEETLKDLETQTQRLEEKITESQQRLESLQN 865

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
                      +N QE  + +  L   + I E + +L  + E   E   E  +  +   R
Sbjct: 866 -------QTFTINHQEAELKQQILNSDQIIAETEILLHQLTEKLGETKKER-DRTETSLR 917

Query: 265 DLEQNQRTFADEMSKLTILEKTRE 288
            L+   +  A  + KL   ++ R+
Sbjct: 918 ALQTQHQQTAWNLEKLLQTQQERK 941


>gi|213620888|ref|ZP_03373671.1| hypothetical protein SentesTyp_26672 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 304

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  + + Y      +D+ Q +
Sbjct: 99  AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLSQYRTGNREQDIAQAK 157

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   +   +  T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 158 ASLEQAKAQLAQAQLDLQDTTLIAPANGTLLT-RAVEPGSMLNAGSTVLTLS-LTRPVWV 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 216 RAYVDERNLSQTQPGRDILL---YTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL 272

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 273 VYRLRIIVTDADDA-----LRQGMPVTV 295



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 84/307 (27%), Gaps = 51/307 (16%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G  I  G  L   +     + +   K  +   +   D   +        
Sbjct: 24  GGRLASLNVDEGDTIKAGQVLGELDHAPYENALMQAKAGVSVAQAQYDLMLAGY------ 77

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                +  E  +        +     ++ F      +++S  +    + +   +R   + 
Sbjct: 78  -----RDEEIAQAAAAVRQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQ- 131

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A L S Q  L+  +    +  ++Q           K++LE  +    Q  +   
Sbjct: 132 ------ATLKSAQDKLSQYRTGNREQDIAQ----------AKASLEQAKAQLAQAQLDLQ 175

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              L   AN        E    L          +++   +    +++ +     G     
Sbjct: 176 DTTLIAPANGTLLTRAVEPGSMLNAGSTVLTLSLTRPVWVRAYVDERNLSQTQPGR--DI 233

Query: 304 QSFSSS----------NYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKG 345
             ++             +   +    +  P +            R ++        +++G
Sbjct: 234 LLYTDGRPDKPYHGKIGFVSPT---AEFTPKTVETPDLRTDLVYRLRIIVTDADDALRQG 290

Query: 346 YTATVRF 352
              TV+F
Sbjct: 291 MPVTVKF 297


>gi|15802058|ref|NP_288080.1| hypothetical protein Z2659 [Escherichia coli O157:H7 EDL933]
 gi|291282776|ref|YP_003499594.1| hypothetical protein G2583_2039 [Escherichia coli O55:H7 str.
           CB9615]
 gi|12515636|gb|AAG56633.1|AE005387_11 putative membrane protein [Escherichia coli O157:H7 str. EDL933]
 gi|13361820|dbj|BAB35776.1| putative membrane protein [Escherichia coli O157:H7 str. Sakai]
 gi|209769508|gb|ACI83066.1| putative membrane protein [Escherichia coli]
 gi|209769510|gb|ACI83067.1| putative membrane protein [Escherichia coli]
 gi|209769512|gb|ACI83068.1| putative membrane protein [Escherichia coli]
 gi|209769516|gb|ACI83070.1| putative membrane protein [Escherichia coli]
 gi|290762649|gb|ADD56610.1| hypothetical protein G2583_2039 [Escherichia coli O55:H7 str.
           CB9615]
          Length = 299

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 70/220 (31%), Gaps = 27/220 (12%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S +     +  +   +   +S    +L +     +   V+  DL            EL
Sbjct: 44  MQSPWTRDGKIRAEQVSITPQVSGRIVELNIK----DNQLVNAGDLLLTIDKTPFQIAEL 99

Query: 231 RENIHEQKNMLRHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTI 282
                +       + +  +EAN           A  L   + +++  Q +     + L  
Sbjct: 100 NAQ-AQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQ 158

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQ 338
            +    Q  I +P++G +    +    +YA   +PL  +V       I      K+    
Sbjct: 159 TQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR--- 214

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             H+++G  A +          K  +  +  I   I  Q 
Sbjct: 215 --HIREGAPAQITL----YSDNKTLQGHVSSIGRAIYDQS 248



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 15  MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 70

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 71  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 130

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 131 SAEELDTANLNVKAMQASVDAAQATLKQTQWQLAQTEIRA 170


>gi|88860853|ref|ZP_01135489.1| putative multidrug efflux system (AcrA/AcrE family) protein
           [Pseudoalteromonas tunicata D2]
 gi|88817066|gb|EAR26885.1| putative multidrug efflux system (AcrA/AcrE family) protein
           [Pseudoalteromonas tunicata D2]
          Length = 352

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 70/207 (33%), Gaps = 20/207 (9%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDLEQNQRTFAD 275
           Q +  V ++   L     +       +N      E  L   N L     +  + Q +   
Sbjct: 107 QLKAQVAQAKARLDAVNSQLAQAQLQLNRAITLREQGLTAINDLDVAKTNFAELQASRNS 166

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +L   +       I +PIAG +V  +     +     Q L+ I  + +   I A V 
Sbjct: 167 AAEQLEQAQVGLSYSQIRAPIAGKVVD-RMAEPGDTVSPGQVLLSIY-NPQSLQIEAAVR 224

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            ++   +K G +  V           K +A + +I P+      +      + V L+   
Sbjct: 225 EQKAVSLKLGQSLAVEVASLN----IKGQARVAEIVPVADSSARS------FLVKLEFA- 273

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNTTL 422
                N++ L  G  A V   + + TL
Sbjct: 274 -----NDVRLMPGMYARVSLPSSSETL 295



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 68/202 (33%), Gaps = 7/202 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +      ++ + N   I S     IK F V  G  + QG  L+  ED +    +   
Sbjct: 57  VEQTEYVPATVIAKQNT-VISSRILAPIKTFAVRAGQVVEQGDLLIELEDGQLKAQVAQA 115

Query: 100 KVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           K  +  +   +   +  L+    L  +        +  +    +     +S   ++    
Sbjct: 116 KARLDAVNSQLAQAQLQLNRAITLREQGLTAINDLDVAKTNFAELQASRNSAAEQLEQAQ 175

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ-KDLTMMKNLFEKNAVSQND 215
           +   Y  ++  +     +     +  +  S  + LLS +  + L +   + E+ AVS   
Sbjct: 176 VGLSYSQIRAPIAG--KVVDRMAEPGDTVSPGQVLLSIYNPQSLQIEAAVREQKAVSLKL 233

Query: 216 LNQQERIVYKSTLELRENIHEQ 237
                  V    ++ +  + E 
Sbjct: 234 GQSLAVEVASLNIKGQARVAEI 255


>gi|319956091|ref|YP_004167354.1| secretion protein hlyd family protein [Nitratifractor salsuginis
           DSM 16511]
 gi|319418495|gb|ADV45605.1| secretion protein HlyD family protein [Nitratifractor salsuginis
           DSM 16511]
          Length = 267

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 47/131 (35%), Gaps = 6/131 (4%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG ++  DN   I S F G +K   V  G ++ +G  L   +  E    +    ++I   
Sbjct: 23  SGTVI-SDNQKMITSRFMGFVKDMNVSEGDRVKKGQVLYEIDSKEIEAAVKQVDLAISQA 81

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESR-----EEQLLDFLGKYHSTCSKVFNYGISSVY 161
           R  +   ++ L+ +       ++  +       E + L+   K      ++    +    
Sbjct: 82  RLALQMNENQLNNVLLNLARNKRLLQKDMVSKFEVEQLELAAKNMRDMVEIAKKQVEQAE 141

Query: 162 RSLKMKLTRMR 172
              +  L + +
Sbjct: 142 AQKESVLNQYK 152



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 21/217 (9%)

Query: 208 KNAVSQNDL-NQQERIVYKSTLELRENIHEQKNMLRHINE--LYDEANLEFANYLKEISR 264
           + AV Q DL   Q R+  +       N+       + + +  +  +  +E      +  R
Sbjct: 68  EAAVKQVDLAISQARLALQMNENQLNNVLLNLARNKRLLQKDMVSKFEVEQLELAAKNMR 127

Query: 265 DLEQ-NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           D+ +  ++      ++   +    +  TI +P  G +V  +     +      P + I  
Sbjct: 128 DMVEIAKKQVEQAEAQKESVLNQYKYLTIKAPNDGVVVAKRLN-EGDMQIPGMPALVIT- 185

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             +   +  +++   ++H++ G    V  P      E K  AII   +P+          
Sbjct: 186 DLRHLKVLVQISESNLKHIRIGKKVKVEIPSIGFQTEGKISAIIPASNPMTH-------- 237

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               +  +KIT   F   N  +  G  A+V    ++ 
Sbjct: 238 ----KFKIKIT---FDKKNANVFPGMYAKVYIPEEDK 267


>gi|298711589|emb|CBJ32648.1| viral A-type inclusion protein [Ectocarpus siliculosus]
          Length = 3582

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 12/213 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E    +  ++  +  L    +   S L+ + ++  +LEKA E +   L     +      
Sbjct: 1612 EREKAVAGREAELAELEAGREARASELEGVRDRLALLEKALEGQRADLARRKAEVSGWEE 1671

Query: 151  KVFNYGISSVYRSLKMKL------TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            +       +  +               R +   +  +E+    L+   +  ++     ++
Sbjct: 1672 EAHRRLEEADEKQRAADRCTRDGANARRELERLKKAVESNFEDLQRQEAGLEQQKEDARS 1731

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF------ANY 258
            L  K   +++ L + ER    +  EL ++  E + M   ++E   +              
Sbjct: 1732 LLLKAKAAESALKEGERKSDATRSELSKSRAEVEKMRSQLSEALSQVESRQGVLASSKRD 1791

Query: 259  LKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            L E    L++ +R  A E  KL    +  E+  
Sbjct: 1792 LDEEKELLQRGKREAAAEADKLEKSREALERDE 1824



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 71/200 (35%), Gaps = 6/200 (3%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN- 154
            +  +   ++ +   ++  ++A   L  +     +A   REE+L         +  ++   
Sbjct: 2172 LRNRSKEMEQVSERLEAAEAAATLLKEELTETRQAVSWREEELAKMRKANADSEDRLRQC 2231

Query: 155  -YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ + + +  +      L ++   ++      + +    K L E+   ++
Sbjct: 2232 AEELQGALLDLRARDSELDGVKEEASALSSRMDGIQESARRARSEAVEWKALAER---AE 2288

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            + L + +R + +S  E R    +     R      ++A        +    +  +     
Sbjct: 2289 SRLEESDR-LRRSAQEQRSQSDQIDRKNRAEMARLEDAKKTLEQERRAFGEESARVAEKE 2347

Query: 274  ADEMSKLTILEKTREQKTIL 293
            A+  S    ++KTR  + IL
Sbjct: 2348 AEARSMAKSMDKTRSLREIL 2367



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 59/203 (29%), Gaps = 2/203 (0%)

Query: 87   FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
             +      L   + +S    R      ++            E A      +      + H
Sbjct: 1452 LDTAREACLERERDLSATEARLREREVEADEVEAELARKKEEMAHARDMLEQARKDAENH 1511

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
            +  ++       S+   L+     +R+       +E         LS  ++ L    N  
Sbjct: 1512 AREAEAATLEARSLKEDLEGSWEEVRAREAKAKGVEEAVKAREEGLSQWEEVLKGQANEA 1571

Query: 207  -EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             E  +  + D   QER   + +  L       +    ++ E  ++A       L E+   
Sbjct: 1572 SESTSKLEADRLSQERNFRERSEALEGEERCAREAKGNLEE-REKAVAGREAELAELEAG 1630

Query: 266  LEQNQRTFADEMSKLTILEKTRE 288
             E           +L +LEK  E
Sbjct: 1631 REARASELEGVRDRLALLEKALE 1653



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 74/219 (33%), Gaps = 18/219 (8%)

Query: 82   TPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTE---------KSALDFLNNKYDVLEK 129
              L   ED +          +++  ++       E         +  L+ L    + L  
Sbjct: 2087 QVLEELEDAKEGMQRSDSRAQELQRRHSEGRAGVEAASRGMKELRRELNRLEEHSEGLSS 2146

Query: 130  AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                R+++L +       T   +    + +  + ++    R+ +       L+ + +  R
Sbjct: 2147 RLRQRDQELAEAAALMTETQRDL--TALRNRSKEMEQVSERLEAAEAAATLLKEELTETR 2204

Query: 190  ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
              +S  +++L  M+   + NA S++ L Q    +  + L+LR    E   +    + L  
Sbjct: 2205 QAVSWREEELAKMR---KANADSEDRLRQCAEELQGALLDLRARDSELDGVKEEASALSS 2261

Query: 250  EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
              +       +    +  + +       S+L   ++ R 
Sbjct: 2262 RMDG-IQESARRARSEAVEWKALAERAESRLEESDRLRR 2299



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 76/224 (33%), Gaps = 20/224 (8%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF--- 141
               +        +   +  ++L+  ++     +     K   +E+A ++REE L  +   
Sbjct: 1504 ARKDAENHAREAEAATLEARSLKEDLEGSWEEVRAREAKAKGVEEAVKAREEGLSQWEEV 1563

Query: 142  --------------LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
                          L     +  + F     ++    +       ++      +  + + 
Sbjct: 1564 LKGQANEASESTSKLEADRLSQERNFRERSEALEGEERCAREAKGNLEEREKAVAGREAE 1623

Query: 188  LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            L  L +  +   + ++ + ++ A+ +  L  Q   + +   E+     E    L   +E 
Sbjct: 1624 LAELEAGREARASELEGVRDRLALLEKALEGQRADLARRKAEVSGWEEEAHRRLEEADEK 1683

Query: 248  YDEAN---LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
               A+    + AN  +E+ R  +  +  F D   +   LE+ +E
Sbjct: 1684 QRAADRCTRDGANARRELERLKKAVESNFEDLQRQEAGLEQQKE 1727


>gi|294625326|ref|ZP_06703963.1| membrane fusion protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600395|gb|EFF44495.1| membrane fusion protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 377

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 17/177 (9%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + + +  LR +   Y  A       L     D++Q +    +  ++  +        T+
Sbjct: 114 AVAQSEAQLRKLENSYRRATQLVGQQLVSA-ADVDQLKFDVENSRAQHRLAALELSYTTV 172

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +PI+G I      +  N+ Q + P+ +IV           V  +++  +K G   T+  
Sbjct: 173 QAPISGVIASRSIKT-GNFVQINTPIFRIV-DDSQLEATLNVPERELATLKSGQPVTLLA 230

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                   ++F   +++I P++            + V+      AF      L+ G 
Sbjct: 231 DALP---GQQFVGKVDRIAPVVDSGSGT------FRVV-----CAFGQGAEALQPGM 273



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 4/161 (2%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  +        + +  SG+     VE G ++  G  L+  +       +   +  ++
Sbjct: 65  TGTAALEPRAEAQVV-AKTSGVALSVMVEEGQKVSAGQALVRLDPDRAHLAVAQSEAQLR 123

Query: 105 NLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            L   +    +     L +  DV +  F+    +    L     + + V    IS V  S
Sbjct: 124 KLENSYRRATQLVGQQLVSAADVDQLKFDVENSRAQHRLAALELSYTTV-QAPISGVIAS 182

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +K      I      + +  S L A L+  +++L  +K+
Sbjct: 183 RSIKTGNFVQINTPIFRIVDD-SQLEATLNVPERELATLKS 222


>gi|260596140|ref|YP_003208711.1| p-hydroxybenzoic acid efflux subunit AaeA [Cronobacter turicensis
           z3032]
 gi|260215317|emb|CBA27278.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Cronobacter
           turicensis z3032]
          Length = 339

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/222 (9%), Positives = 63/222 (28%), Gaps = 22/222 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q    +            +   +E++      N+L  +A       + + +  L+   
Sbjct: 107 IDQPRYQKALEEAEADVAYYQALANEKRREAGRRNQLGVQAMSR--EEIDQANNVLQTVL 164

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A   +   +     ++  I +P  G +     ++   +  +    + +V  +   Y+
Sbjct: 165 HQLAKAEATRDLARLDLQRTVIRAPADGWVTNLNVYT-GEFITRGSTAVALVKQNS-FYV 222

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV- 389
            A +   +++ V+ G+   +                ++ +   ++   +    +    V 
Sbjct: 223 LAYMEETKLEGVRPGFRVEI--TPLGSNN--VLHGTVDSVSAGVTNASSTRDDKGMATVD 278

Query: 390 ----------ILKITDLAFSDNNIELRN-GFPAEVLFTAKNT 420
                      + +  +        L   G  A V       
Sbjct: 279 SNLEWVRLAQRVPV-RIRLDKQPGNLYPAGTTATV-VVTGER 318



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 45/157 (28%), Gaps = 5/157 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L      +   + L+ +  I     WS           + +     +VV I    +G+I 
Sbjct: 33  LTTKITRTAITVVLVVLAFIAIFRAWSFYTE----SPWTRDARFTADVVAIAPDVAGLIT 88

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V +   + +   L T +       ++  +  +   +  +  EK       N+  V  
Sbjct: 89  SVDVHDNQLVKKDQVLFTIDQPRYQKALEEAEADVAYYQA-LANEKRREAGRRNQLGVQA 147

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            + E  ++         H          ++ +     
Sbjct: 148 MSREEIDQANNVLQTVLHQLAKAEATRDLARLDLQRT 184


>gi|253576168|ref|ZP_04853500.1| efflux transporter [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844511|gb|EES72527.1| efflux transporter [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 366

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 84/269 (31%), Gaps = 46/269 (17%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-------AVSQNDLNQQERI 222
           R  +I L+   +    S     L   + +L + + L +         A+ Q D+   ++ 
Sbjct: 67  RTETIELSVSAVGKIMSQREEPLFFTEDNLHVKEVLVKAGDKVKKGDALIQLDVEDLQKE 126

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           + K  LE R+     K +LR  +E       E A   +E  ++LE  ++T AD       
Sbjct: 127 LRKKKLEFRKQEISMKELLRTKDEKDPIEFEEAAIVFEEQRQELEDLEKTIAD------- 179

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                   T+ +P +GTI+   +       +    +  ++  +    + A+   + +  +
Sbjct: 180 -------GTLRAPFSGTIISVSA-QKGAAIKAYDTVA-VLSDTSSLVVAAQFAKEDLAKI 230

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----------YYEVIL 391
             G  A V            F   ++ +       DN+                Y  V L
Sbjct: 231 AVGMKAKVDINA-----MGVFDGKVKVMPVDTGSSDNDNGGGSGTPPERDTIDKYLIVEL 285

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                             P  V    +  
Sbjct: 286 DKWPEGLERGR-------PLSVSIVTERK 307



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 46/130 (35%), Gaps = 6/130 (4%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K+  V+ G ++ +G  L+  +  +    +  KK+  +        E S  + L  K + 
Sbjct: 98  VKEVLVKAGDKVKKGDALIQLDVEDLQKELRKKKLEFR------KQEISMKELLRTKDEK 151

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
               FE       +   +       + +  + + +    + ++  +   +   D     S
Sbjct: 152 DPIEFEEAAIVFEEQRQELEDLEKTIADGTLRAPFSGTIISVSAQKGAAIKAYDTVAVLS 211

Query: 187 LLRALLSSHQ 196
              +L+ + Q
Sbjct: 212 DTSSLVVAAQ 221


>gi|86361279|ref|YP_473166.1| putative multidrug resistance efflux pump protein [Rhizobium etli
           CFN 42]
 gi|86285381|gb|ABC94439.1| putative multidrug resistance efflux pump protein [Rhizobium etli
           CFN 42]
          Length = 383

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/372 (14%), Positives = 110/372 (29%), Gaps = 78/372 (20%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   +V  + +  SGIIK+  V +  ++ +G  L   +  E          +++    ++
Sbjct: 79  VVSADVSTLSAQISGIIKRTPVADYQKVTKGQVLAEIDSREYDA-------AVEAAGANL 131

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            + +++L  L N+ ++      + E Q    L +   T  +           S   +L +
Sbjct: 132 ASAQASLANLANQIELQRAVVRAAEAQNASALAQQTQTEQEFQRQKQLGGATSQH-ELQQ 190

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            +S YL  +   N ++       +  K L   + L +                     E+
Sbjct: 191 AQSAYLQAVAAVNSTAAAIEQQQAQLKVLQGQEPLLQ--------------------AEV 230

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           R    +      HI + Y                                          
Sbjct: 231 RA--AQANLDTAHIRQSYTRIE-------------------------------------- 250

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
              +P  G I+  +     +       ++  +P     YI A     Q+  +  G +A +
Sbjct: 251 ---APFYG-ILGRRFVHEGDVVGAGTGIVSEIPL-PNVYITANFKETQLARMTPGRSAEI 305

Query: 351 RFPHYA-DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE----L 405
               +   +   K   +      I +    +  T  Y +V+ +I      D +      L
Sbjct: 306 TVDTFPGQVLHGKVADLSPASGAIFALLPPDNATGNYTKVVQRIPVRIELDPDQPLIDQL 365

Query: 406 RNGFPAEVLFTA 417
           R G  A V    
Sbjct: 366 RPGMSAIVTVDT 377


>gi|29654131|ref|NP_819823.1| RND family efflux transporter MFP subunit [Coxiella burnetii RSA
           493]
 gi|29541397|gb|AAO90337.1| acriflavin resistance periplasmic protein [Coxiella burnetii RSA
           493]
          Length = 351

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 65/194 (33%), Gaps = 22/194 (11%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +    ++  + +  +   K             N   +   +E++      +   A   SK
Sbjct: 98  QLDNAQAQADYQSAVTAMKLARTKYERSKLLLNQAISQ--QELAALKADMESKEASVQSK 155

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L  L     +K + +P +G ++        +Y +   PL+ +V ++       +V    +
Sbjct: 156 LAAL----NEKVVNAPFSG-VLGAFQVQVGDYVKAGDPLVTLV-NTSQLRADFQVPENFL 209

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +K+G   T+    Y     K F   +  I P +S    +          + I  L  +
Sbjct: 210 PELKQGQLVTITTGTYPQ---KTFYGTVSFISPTVSSDTRS----------ISIQALVPN 256

Query: 400 DNNIELRNGFPAEV 413
           D  + L  G    V
Sbjct: 257 DKEL-LSPGMFVHV 269



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 51/128 (39%), Gaps = 3/128 (2%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
              I  +V++ G +     VV I +   G I +   ++G ++  G P++  ++ +     
Sbjct: 50  TADIPNTVNALGSLSAV-KVVTISAESDGRIAEIHFKSGQEVDTGMPIVQLDNAQAQADY 108

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDV--LEKAFESREEQLLDFLGKYHSTCSKVFN 154
                ++K  R   +  K  L+   ++ ++  L+   ES+E  +   L   +        
Sbjct: 109 QSAVTAMKLARTKYERSKLLLNQAISQQELAALKADMESKEASVQSKLAALNEKVVNAPF 168

Query: 155 YGISSVYR 162
            G+   ++
Sbjct: 169 SGVLGAFQ 176



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLIDLKKVSIKNLR 107
           N   + +PFSG++  FQV+ G  +  G PL+T  +  +      + +  +  L+
Sbjct: 160 NEKVVNAPFSGVLGAFQVQVGDYVKAGDPLVTLVNTSQLRADFQVPENFLPELK 213


>gi|11386139|ref|NP_000923.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-3
            isoform 1 [Homo sapiens]
 gi|1730573|sp|Q01970|PLCB3_HUMAN RecName: Full=1-phosphatidylinositol-4,5-bisphosphate
            phosphodiesterase beta-3; AltName: Full=Phosphoinositide
            phospholipase C-beta-3; AltName: Full=Phospholipase
            C-beta-3; Short=PLC-beta-3
 gi|836665|gb|AAA77683.1| phospholipase C-beta-3 [Homo sapiens]
 gi|119594636|gb|EAW74230.1| phospholipase C, beta 3 (phosphatidylinositol-specific), isoform
            CRA_a [Homo sapiens]
 gi|148745659|gb|AAI42682.1| Phospholipase C, beta 3 (phosphatidylinositol-specific) [Homo
            sapiens]
 gi|168277818|dbj|BAG10887.1| phospholipase B, delta 3 [synthetic construct]
          Length = 1234

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 82/207 (39%), Gaps = 8/207 (3%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              T  L+D    +    RC +     AL    +  D  E   E++  Q  +F  +   + 
Sbjct: 987  TLTRRLLDGLAQAQAEGRCRL--RPGALGGAADVEDTKEGEDEAKRYQ--EFQNRQVQSL 1042

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK- 208
             ++    + +  +     L R     L  + L+  ++  + L   ++++   ++ + ++ 
Sbjct: 1043 LELREAQVDAEAQRRLEHL-RQALQRLREVVLDANTTQFKRLKEMNEREKKELQKILDRK 1101

Query: 209  --NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              N++S+  +  + +   + T   R +I E  N +R + E   + +       +++ + L
Sbjct: 1102 RHNSISEAKMRDKHKKEAELTEINRRHITESVNSIRRLEEAQKQRHDRLVAGQQQVLQQL 1161

Query: 267  EQNQRTFADEMSKLTILEKTREQKTIL 293
             + +     ++++    ++ R  + I 
Sbjct: 1162 AEEEPKLLAQLAQECQEQRARLPQEIR 1188


>gi|313158054|gb|EFR57459.1| efflux transporter, RND family, MFP subunit [Alistipes sp. HGB5]
          Length = 384

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 68/214 (31%), Gaps = 19/214 (8%)

Query: 214 NDLNQQERIVYKSTLELRENIHE--QKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             L+  E  V  + + L +   E  +   L     + DE   +    L++   +L+  + 
Sbjct: 113 GQLSSAESRVSVAEISLDQTRREFDRTEALHKKGVVSDEEYEQGRTALRKAQEELQNAKE 172

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-----SQPLMKIVPHSK 326
                 + +T   K      I S I G I+       ++  Q         +   V    
Sbjct: 173 NMEIVKNGITSRYKELSNTQIRSTIDGMILDVPVKVGNSVIQSNTFNDGTTIAT-VADMS 231

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
               R  V    +  + +     +      ++   +  A++E + P  ++ +        
Sbjct: 232 NMLFRGNVDETDVGKLHETMPVKLTIGALQNV---ELDALLEYVSPKATEDNG------- 281

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             ++ ++        N+ +R G+ A      ++ 
Sbjct: 282 -VIMFEVKAAVKIPENVFVRAGYSANASIVIQSR 314



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 6/136 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++  V ++G++   D V  IK   SGI+     E G  + +G  + T + +     +   
Sbjct: 60  LKQYVVATGKVEPRDEV-LIKPQISGIVSDVYKEAGQMVRKGEVIATVKVVPEMGQLSSA 118

Query: 100 KVSIKNLRCHIDTEKSALD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--KVFN 154
           +  +      +D  +   D    L+ K  V ++ +E     L     +  +     ++  
Sbjct: 119 ESRVSVAEISLDQTRREFDRTEALHKKGVVSDEEYEQGRTALRKAQEELQNAKENMEIVK 178

Query: 155 YGISSVYRSLKMKLTR 170
            GI+S Y+ L     R
Sbjct: 179 NGITSRYKELSNTQIR 194


>gi|182415173|ref|YP_001820239.1| RND family efflux transporter MFP subunit [Opitutus terrae PB90-1]
 gi|177842387|gb|ACB76639.1| efflux transporter, RND family, MFP subunit [Opitutus terrae
           PB90-1]
          Length = 358

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 90/254 (35%), Gaps = 23/254 (9%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +    + + + + +  L  ++ +  L  + S    +   ++       V +    + ++
Sbjct: 18  ETRGAAVAQRQPVEVAPLTRQDLAETLNLVGSLAANESATIRP-ETTGLVREIHFEEGQQ 76

Query: 222 IVYKSTL------ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           +V    L      ELR  + + +   R + EL  +              D+++ +  FA 
Sbjct: 77  VVKGQVLVKIDDSELRAQLTQAEARYR-LAELNLQRAERLGETQSTSVADVDRARSEFAS 135

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             S+L ++    ++  I +P  G +V  ++ S  +Y    Q ++  +       I  +V 
Sbjct: 136 AKSELDLIRVRLDRTEIRAPFDG-VVGVRTLSPGDYVNS-QAVITTIDDLSRMKIDFQVP 193

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            +    V+ G T  VR          +    +  +  ++ +   + + + +      +  
Sbjct: 194 ERFAGKVRPGTTFAVRSQSLPAGT--EISGEVYFVASVVDRATRSSEVKGF------VNT 245

Query: 396 LAFSDNNIELRNGF 409
           LA       L+ G 
Sbjct: 246 LAPG-----LKPGM 254



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 32/73 (43%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I+   +G++++   E G Q+++G  L+  +D E    +   +   +    ++   +   
Sbjct: 57  TIRPETTGLVREIHFEEGQQVVKGQVLVKIDDSELRAQLTQAEARYRLAELNLQRAERLG 116

Query: 118 DFLNNKYDVLEKA 130
           +  +     +++A
Sbjct: 117 ETQSTSVADVDRA 129


>gi|171913755|ref|ZP_02929225.1| chemiosmotic efflux system C protein B [Verrucomicrobium spinosum
           DSM 4136]
          Length = 377

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 42/129 (32%), Gaps = 16/129 (12%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +PIAGTI      +        Q L++IV         A+V       + K   A +R
Sbjct: 116 LEAPIAGTIAKVAI-AQGQPISPDQSLIEIV-DVTQVEAAARVPEHLAGRLAKEQHARIR 173

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              Y D   K F+A +  +     +    ++   +             + +  LR G  A
Sbjct: 174 IAAYPD---KVFEAQLNHLGAYADETAGTVEAAFH-----------VPNPDKLLRPGMRA 219

Query: 412 EVLFTAKNT 420
           E        
Sbjct: 220 EFSIVTSKR 228


>gi|218533095|ref|YP_002423911.1| secretion protein HlyD [Methylobacterium chloromethanicum CM4]
 gi|218525398|gb|ACK85983.1| secretion protein HlyD family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 359

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 26/202 (12%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR----------TFADEMSKLTILE 284
            E     R  +    EA       L  +S  +E+ Q+                S+L+  +
Sbjct: 130 AEAAIKNREADLSVKEAQSARRAALSTVSTSVEEKQQFAGTAKIAEAALETARSQLSQAK 189

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           K  E+  + S + G +         +YAQ      +++  +   ++       ++ H+  
Sbjct: 190 KNLERTQVRSTVNGRVTNLLLR-VGDYAQTGTANARVI-DTDSFWVDGYFEETKMAHIHV 247

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEYYE---------VILKI 393
           G  A +    Y    +   +++   I      +           Y          V ++I
Sbjct: 248 GAPAEMALMGYGASLKGTVESLTLGISTANAATSTQGLPNVDPVYTWVRLAQRVPVRIRI 307

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
             +      + L  G  A V+ 
Sbjct: 308 DHV---PPEVTLVAGMTATVVV 326



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 5/124 (4%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +     VV I    +G I + +V +  ++ +G  L   +  +  + +   + +IKN 
Sbjct: 80  DGRVRV--QVVNIAPQVAGTIVELRVTDNQEVKKGDVLYVIDPFDYQEAVVSAEAAIKNR 137

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              +  +++          V   +    E+Q      K      +     +S   ++L+ 
Sbjct: 138 EADLSVKEAQSARRAALSTV---STSVEEKQQFAGTAKIAEAALETARSQLSQAKKNLER 194

Query: 167 KLTR 170
              R
Sbjct: 195 TQVR 198


>gi|114667429|ref|XP_523647.2| PREDICTED: keratin, type I cuticular Ha8 [Pan troglodytes]
          Length = 456

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 86/212 (40%), Gaps = 5/212 (2%)

Query: 83  PLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            ++  ++ +   D   +K  S ++LR  ++ +K     L +   + +   E+++E L + 
Sbjct: 175 LIVQIDNAKLAADDFRIKLESERSLRQLVEADKCGTQKLLDDATLAKADLEAQQESLKEE 234

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                S   +      S +   L+++L    +I LNR+ L    +   A+L ++++D+  
Sbjct: 235 QLSLKSNHEQEVKILRSQLGEKLRIELDIEPTIDLNRV-LGEMRAQYEAMLETNRQDVEQ 293

Query: 202 MKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                +   +S  D++  E +       LELR  ++  +   +  + L D          
Sbjct: 294 WFQ-AQSEGISLQDMSCSEELQCCQSEILELRCTVNALEVERQAQHTLKDCLQNSLCEAE 352

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +L Q Q   ++   +L+ +    E++ 
Sbjct: 353 DRFGTELAQMQSLISNVEEQLSEIRADLERQN 384


>gi|32475822|ref|NP_868816.1| hypothetical protein RB9315 [Rhodopirellula baltica SH 1]
 gi|32446365|emb|CAD76193.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 736

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 54/151 (35%), Gaps = 8/151 (5%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
            P   +R + L I  +  L+   +  PI   V ++ ++          +  +G ++    
Sbjct: 440 APGKARRRSRLMIGMVAVLLLAILFTPIPHRVKATAKVQPIQQSKIF-ALTTGRLESI-A 497

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL----- 127
             G  +    PL+   D +TT  I+  +  I  L   +   + +    +     L     
Sbjct: 498 STGQLVRVNEPLVRLSDWKTTLQIERLEGEIAELEARLKGTRMSRIQSDAGTTTLANIPT 557

Query: 128 -EKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            E A +++ E+LL    +      +  + G 
Sbjct: 558 NEFALQAKREELLTIQKESEHLEIRSPHAGQ 588



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 72/233 (30%), Gaps = 42/233 (18%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + S + AL +   + +     L   N      L+  +  +    LE    I E +  L+ 
Sbjct: 481 QQSKIFALTTGRLESIASTGQLVRVN-EPLVRLSDWKTTLQIERLE--GEIAELEARLKG 537

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                 +     ++       ++  N+     +  +L  ++K  E   I SP AG IV  
Sbjct: 538 TRMSRIQ-----SDAGTTTLANIPTNEFALQAKREELLTIQKESEHLEIRSPHAGQIVAV 592

Query: 304 QSFSS----------------------SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
            +                           +     P+  +V  +    +   V   QI  
Sbjct: 593 SANPITPWQRSRSQIGWSGQPTEAINRGAWISSGTPICNVV-SNDQHKVSVSVDASQIGW 651

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +++G +A      +       +   + ++    S+ D        Y+V + + 
Sbjct: 652 IREGQSA---VTSFPSGTT--WTGNVTEVGTRPSENDGT------YKVTVALD 693


>gi|325272584|ref|ZP_08138947.1| RND family efflux transporter MFP subunit [Pseudomonas sp. TJI-51]
 gi|324102284|gb|EGB99767.1| RND family efflux transporter MFP subunit [Pseudomonas sp. TJI-51]
          Length = 438

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 59/156 (37%), Gaps = 4/156 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +    N V ++S  +G + K   + G Q+  G  L   +       +   + ++  
Sbjct: 81  ALGTVTA-TNTVNVRSRVAGELVKIHFKEGQQVKAGDLLAEIDPRTYRIALQQAEGTLAQ 139

Query: 106 LRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            +  +   +   +    L  +  + ++  ++ E Q+  F G   +  ++V +  ++  + 
Sbjct: 140 NQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVNDARLNLEFT 199

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            ++  +     +    L     ++   AL+   Q +
Sbjct: 200 QIRAPINGRVGLRQLDLGNLVAANDTNALVVITQTE 235


>gi|295690513|ref|YP_003594206.1| HlyD family protein [Caulobacter segnis ATCC 21756]
 gi|295432416|gb|ADG11588.1| secretion protein HlyD family protein [Caulobacter segnis ATCC
           21756]
          Length = 294

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 80/251 (31%), Gaps = 30/251 (11%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           S L+  + +++ + +   + LF    V +       R    +    R ++ + +  L   
Sbjct: 58  SGLVTRVAAANDEAVKAGQPLF---YVDRERYALALRQADAAVEAQRASLIQARRELSRN 114

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
             L D    E      +    +EQ Q   A  ++   +     ++  +L+P  G +    
Sbjct: 115 RALGDLVAAEVTE---QSQSKVEQVQAALAQAVASRDVAALNLKRTEVLAPTDGFLSDLT 171

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +  +Y    +P++ ++  S    +       ++  ++ G   +V+         +  K
Sbjct: 172 LRT-GDYVTAGKPVLALI-DSHSFRVEGYFEETKLSGLRIGQPVSVKIMGED----RTLK 225

Query: 365 AIIEKIDPIISQQDNNLQTQ---------------EYYEVILKITDLAFSDNNIELRNGF 409
             I+ I   I  +D                     +   V + +     +  ++ L  G 
Sbjct: 226 GHIQSIAAGIEDRDRAASDNLLPNVNPTFSWVRLAQRVPVRVALDQ---TPRDLRLIAGR 282

Query: 410 PAEVLFTAKNT 420
            A V       
Sbjct: 283 TATVSVLTGAR 293



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 41/121 (33%), Gaps = 4/121 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
             +L    + G   W+    ++      G +  +  VV++    SG++ +    N   + 
Sbjct: 18  GAVLVTAAVGGKALWTHY-QVDPWTR-DGRVRAD--VVKVAPDVSGLVTRVAAANDEAVK 73

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G PL   +       +     +++  R  +   +  L       D++      + +  +
Sbjct: 74  AGQPLFYVDRERYALALRQADAAVEAQRASLIQARRELSRNRALGDLVAAEVTEQSQSKV 133

Query: 140 D 140
           +
Sbjct: 134 E 134


>gi|227885938|ref|ZP_04003743.1| HlyD-family protein [Escherichia coli 83972]
 gi|300995397|ref|ZP_07181077.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           45-1]
 gi|301051027|ref|ZP_07197871.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           185-1]
 gi|306813391|ref|ZP_07447581.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli NC101]
 gi|222033403|emb|CAP76144.1| Uncharacterized protein ydhJ [Escherichia coli LF82]
 gi|227837117|gb|EEJ47583.1| HlyD-family protein [Escherichia coli 83972]
 gi|300297322|gb|EFJ53707.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           185-1]
 gi|300406158|gb|EFJ89696.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           45-1]
 gi|305853136|gb|EFM53576.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli NC101]
 gi|307553667|gb|ADN46442.1| auxiliary transport protein [Escherichia coli ABU 83972]
 gi|312946245|gb|ADR27072.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315299678|gb|EFU58920.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           16-3]
          Length = 285

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 23/209 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K    +  ++       +  N+ +   V+  DL            EL     +     
Sbjct: 37  DGKIRAEQVSITPQVSGRIIELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQ 95

Query: 242 RHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +  +EAN           A  L   + +++  Q +     + L   +    Q  I 
Sbjct: 96  SDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIR 155

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTAT 349
           +P++G +    +    +YA   +PL  +V       I      K+      H+++G  A 
Sbjct: 156 APVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQ 209

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +          K  +  +  I   I  Q 
Sbjct: 210 ITL----YSDNKTLQGHVSSIGRAIYDQS 234



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRII 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 156


>gi|218288711|ref|ZP_03492974.1| biotin/lipoyl attachment domain-containing protein
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218241069|gb|EED08245.1| biotin/lipoyl attachment domain-containing protein
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 214

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 42/150 (28%), Gaps = 4/150 (2%)

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            Q +  D +  +++        ++ +P   TIV NQ+ +         PL      +   
Sbjct: 66  AQFSAGDVIGTISVPGAKGATVSVTAPETSTIVQNQAVNHQFVV-AGTPLAYAYNLND-L 123

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ-QDNNLQTQEYY 387
           ++ A +    I  V  G    V    +     +     +                   + 
Sbjct: 124 WVTANIKETDINDVHVGQNVDVYVDAFPGTSFQGVVQQVGLATAATFSLLPQTNNNANFT 183

Query: 388 EV-ILKITDLAFSDNNIELRNGFPAEVLFT 416
           +V  +    +       +L  G  A V   
Sbjct: 184 KVTQVIPVRIRLQTYTGQLVPGMSATVRIH 213


>gi|110807733|ref|YP_691253.1| hypothetical protein SFV_3940 [Shigella flexneri 5 str. 8401]
 gi|110617281|gb|ABF05948.1| putative membrane protein [Shigella flexneri 5 str. 8401]
          Length = 361

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +V +     +I T ++ L 
Sbjct: 49  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQVDLMTATHNIKTLRAQLT 108

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 109 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 168

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y   + +R   +  
Sbjct: 169 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVIQVLIRPGTYAA 225

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 226 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 281

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 282 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 330


>gi|83745676|ref|ZP_00942734.1| Probable transmembrane multidrug efflux system protein [Ralstonia
           solanacearum UW551]
 gi|83727753|gb|EAP74873.1| Probable transmembrane multidrug efflux system protein [Ralstonia
           solanacearum UW551]
          Length = 441

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 3/119 (2%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            VE++    G I     ++GS + +G PL T +       +   + ++   +  +    S
Sbjct: 70  RVEVRPLVGGTIVAVHFKDGSIVKKGDPLFTIDPRPYAAEVARTQAALTAAKSRVAYTAS 129

Query: 116 ALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            LD    L     +  + FE +E    +         + +    ++  Y  +   +   
Sbjct: 130 ELDRAQKLVADNAIARREFEEKENAAREAQANLQGAAAALDAARLNLEYTRIVAPVAGR 188



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 29/101 (28%), Gaps = 7/101 (6%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------YLKEISRDLEQNQRTFA 274
           R         +  +   K+ + +     D A    A+        +E      + Q    
Sbjct: 104 RPYAAEVARTQAALTAAKSRVAYTASELDRAQKLVADNAIARREFEEKENAAREAQANLQ 163

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              + L       E   I++P+AG +   +  +  N     
Sbjct: 164 GAAAALDAARLNLEYTRIVAPVAGRVSRAEI-TVGNVVATG 203


>gi|320040240|gb|EFW22173.1| conserved hypothetical protein [Coccidioides posadasii str.
           Silveira]
          Length = 1259

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 83/226 (36%), Gaps = 29/226 (12%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDT-----EKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           +  D + L + S++    ++       + S L  L  +  +   A  +++E+L   L + 
Sbjct: 576 KANDELTLVRSSLEQQIANLQRTMQDEKASHLQELKRREMLKSDALAAQKEELQGHLQEM 635

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL------------DLENKSSLLRALLS 193
                +     + +    L  +  ++++ +  ++            + E K    +  L 
Sbjct: 636 KKKDDQAAAEKLRAREEELYGERDQLKAEWEQQMAALNKSKDDMAAEYEGKLDTKKTELE 695

Query: 194 SHQKDLTMMK-NLFEKNA---VSQNDLNQQ-------ERIVYKSTLELRENIHEQKNMLR 242
           + Q +L   +  L  K +     Q +LN         +  +     EL E   E +    
Sbjct: 696 TKQGELDAKQAELQAKQSELDARQEELNATKSDLEAKQAELVDRQKELEEKQSEVEAKQE 755

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            IN L  E   + A  L++  R+LEQ Q     + ++L  ++   +
Sbjct: 756 EINRLKSELESKIAE-LEDKRRELEQKQGELESKQTELQAIQDELQ 800


>gi|288817353|ref|YP_003431700.1| efflux transporter [Hydrogenobacter thermophilus TK-6]
 gi|288786752|dbj|BAI68499.1| efflux transporter [Hydrogenobacter thermophilus TK-6]
          Length = 349

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 47/106 (44%), Gaps = 3/106 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS---ALDFL 120
           SG + +   + G  + QG PLL  +  +  + +   + ++   R + + +++      FL
Sbjct: 66  SGRVLELLTDEGQLVRQGQPLLKIDPSDYQNTLRQLEANLMQARANYENQRAIYERRKFL 125

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +  +  + FE+ + QL  +  +  +  +++ N  +     +L+ 
Sbjct: 126 YEQNLIAREDFENAKTQLKVYQDQVSAIEAQLRNARLQLSRTTLRA 171



 Score = 40.0 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 45/125 (36%), Gaps = 5/125 (4%)

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            LL+   + +   + L +   +  +D     R +  + ++ R N   Q+ +      LY+
Sbjct: 71  ELLTDEGQLVRQGQPLLK---IDPSDYQNTLRQLEANLMQARANYENQRAIYERRKFLYE 127

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +  +   ++       L+  Q   +   ++L        + T+ +P +G I         
Sbjct: 128 QNLIAREDFEN-AKTQLKVYQDQVSAIEAQLRNARLQLSRTTLRAPFSGYIAQKFVN-VG 185

Query: 310 NYAQQ 314
           +Y   
Sbjct: 186 DYITP 190


>gi|300024420|ref|YP_003757031.1| efflux transporter RND family, MFP subunit [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526241|gb|ADJ24710.1| efflux transporter, RND family, MFP subunit [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 404

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/273 (10%), Positives = 83/273 (30%), Gaps = 10/273 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +   SG ++  + ++         + +   + G ++ +G  L      +    I   + 
Sbjct: 60  ETAVVSGSLIPREEILVSPEIEGLRVLQLLADEGDRVKKGDILARLVSEQIDAQIAQNQA 119

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ-----LLDFLGKYHSTCSKVFNYG 156
           ++      I   +S +     +        E  E       L         + ++     
Sbjct: 120 NLARSVAAIAQAESQIAQAEAQAKEAAAQLERAEPLKKSGYLSGATYDQRESAARTTAAQ 179

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + +    L         +     +L+ + S       +  +D  + +      A++ +  
Sbjct: 180 LVAARDGLTAAKADKAQVEAQGRELQWRRSNTDV---TAPQDGVISRRNARMGALATSIG 236

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
               RI+ +  +EL   I E +     + +    +  +  ++  ++   L   +      
Sbjct: 237 EPMFRIIQRGEIELDAEIVETELKNVKVGQKAVVSVPQIGDFEGKVR--LVSPEVDKTTR 294

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           + ++ I   +  Q  I S   G I   +S    
Sbjct: 295 LGRVKIFLGSNPQLRIGSYARGLIETARSRGLG 327



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 73/254 (28%), Gaps = 37/254 (14%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  QLL   G        +       +   +      +          E++ +   A   
Sbjct: 84  RVLQLLADEGDRVKKGDILARLVSEQIDAQIAQNQANLARSVAAIAQAESQIAQAEAQAK 143

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
                L   + L +   +S    +Q+E     +  +L                       
Sbjct: 144 EAAAQLERAEPLKKSGYLSGATYDQRESAARTTAAQLVA--------------------- 182

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                       L   +   A   ++   L+  R    + +P  G I    +      A 
Sbjct: 183 --------ARDGLTAAKADKAQVEAQGRELQWRRSNTDVTAPQDGVISRRNAR-MGALAT 233

Query: 314 Q-SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
              +P+ +I+       + A++   ++++VK G  A V  P     +   F+  +  + P
Sbjct: 234 SIGEPMFRII-QRGEIELDAEIVETELKNVKVGQKAVVSVP-----QIGDFEGKVRLVSP 287

Query: 373 IISQQDNNLQTQEY 386
            + +     + + +
Sbjct: 288 EVDKTTRLGRVKIF 301


>gi|188584479|ref|YP_001927924.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           populi BJ001]
 gi|179347977|gb|ACB83389.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           populi BJ001]
          Length = 358

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 62/208 (29%), Gaps = 17/208 (8%)

Query: 220 ERIVYKSTLELRENIHEQK-NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           +  V  +  E++    +      +                 ++ +   +  +       S
Sbjct: 123 QEAVVSAEAEIKNREADLSVKQAQAARRAALSTVSTSVEEKQQYAGTAKIAEAALETARS 182

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +L+   K  E+  + S + G +         +YAQ     M+++  +   ++       +
Sbjct: 183 QLSQARKNLERTQVRSTVNGRVTNLLLR-VGDYAQTGTANMRVI-DTDSFWVDGYFEETK 240

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEYYE-------- 388
           + H++ G  A +    Y        +++   I      +           Y         
Sbjct: 241 MAHIRVGAPAEMALMGYGTALRGTVESLTLGISTANAATSTQGLPNVDPVYTWVRLAQRV 300

Query: 389 -VILKITDLAFSDNNIELRNGFPAEVLF 415
            V ++I  +      + L  G  A V+ 
Sbjct: 301 PVRIRIDHV---PPEVTLVAGMTATVVV 325



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 59/169 (34%), Gaps = 19/169 (11%)

Query: 10  KRNHPASLKRM----TLLSIIGIIGLITWSILLPIEISVSSS----GEILNEDNVVEIKS 61
           +R H + L R+     +L+   +   + W         V++     G +     VV +  
Sbjct: 40  RRRHWSRLLRLAVTGLVLACATVAAYVVWQFY------VTAPWTRDGRVRV--QVVNLAP 91

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             +G I + +V +  ++ +G  L   +  +  + +   +  IKN    +  +++      
Sbjct: 92  QVAGTIVELRVADNQEVKRGDVLYVIDPFDYQEAVVSAEAEIKNREADLSVKQAQAARRA 151

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
               V   +    E+Q      K      +     +S   ++L+    R
Sbjct: 152 ALSTV---STSVEEKQQYAGTAKIAEAALETARSQLSQARKNLERTQVR 197


>gi|189426513|ref|YP_001953690.1| efflux transporter RND family, MFP subunit [Geobacter lovleyi SZ]
 gi|189422772|gb|ACD97170.1| efflux transporter, RND family, MFP subunit [Geobacter lovleyi SZ]
          Length = 376

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 61/205 (29%), Gaps = 13/205 (6%)

Query: 198 DLTMMKNLFEK-NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            L   +NL +   AV+  D  ++     ++  +L ++   +   L     L  +      
Sbjct: 94  QLDSKENLAQATGAVAAIDEAKRGLEEAQARQKLADSTFGRFKRLYDEQALTRQEFDTRQ 153

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              +   + + + +                 +   I++PI+G IV  Q+    +     Q
Sbjct: 154 TERELAHQAVARAEARLRQTQEASRAAGAMADYTKIVAPISGIIVAKQAD-LGSTVFPGQ 212

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           PLM I        +   +   Q++ V  G    V+           F   + ++ P    
Sbjct: 213 PLMTI-DDEGSYQLELAIPESQVRAVHAGTPVQVQIDA----TGSSFSTRVTEVVPSSDP 267

Query: 377 QDNNLQTQEYYEVILKITDLAFSDN 401
                     Y   + +        
Sbjct: 268 ASRT------YTAKVAVPQKGVRSG 286



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 50/144 (34%), Gaps = 3/144 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SG +    V  G ++ +G  L   +  E          +I   +  ++  ++   
Sbjct: 67  VSARISGTVSVLHVREGDRVRKGQLLGQLDSKENLAQATGAVAAIDEAKRGLEEAQARQK 126

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
             ++ +   ++ ++  E+ L         T  ++ +  ++     L+      R+     
Sbjct: 127 LADSTFGRFKRLYD--EQALTRQEFDTRQTERELAHQAVARAEARLRQTQEASRAAGAM- 183

Query: 179 LDLENKSSLLRALLSSHQKDLTMM 202
            D     + +  ++ + Q DL   
Sbjct: 184 ADYTKIVAPISGIIVAKQADLGST 207


>gi|319794958|ref|YP_004156598.1| efflux transporter, rnd family, mfp subunit [Variovorax paradoxus
           EPS]
 gi|315597421|gb|ADU38487.1| efflux transporter, RND family, MFP subunit [Variovorax paradoxus
           EPS]
          Length = 382

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 52/140 (37%), Gaps = 3/140 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE SV++ G +     V ++ +  SG I + QV+ G  + +G  L+  +       +D
Sbjct: 38  ATIESSVTALGVLQPRRYV-DVGAQVSGQILRLQVQPGDVVTKGQLLVEIDPSVQRATVD 96

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S+  LR  +  +++       ++    +       +  D  G   +  S      I
Sbjct: 97  AGRASLAGLRAQLADQRAQHRLAGQQHARQRQMASDGATREEDVQGAEATLASAA--ARI 154

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
            ++   +      +++    
Sbjct: 155 DNLDAQIAQTQATLKADEAR 174


>gi|296107712|ref|YP_003619413.1| Chemiosmotic efflux system protein B-like protein [Legionella
           pneumophila 2300/99 Alcoy]
 gi|295649614|gb|ADG25461.1| Chemiosmotic efflux system protein B-like protein [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 311

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 16/118 (13%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +PIAG I   ++ +     + +  L  I  +     + A+V  + +  VK G    VR
Sbjct: 117 VNAPIAGII-DARNINLGQAVEPNTVLFHIS-NRDKLLVVAQVYEEDLGKVKVGQEVNVR 174

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              Y          ++  I+P +      +       V + + +         L+ G 
Sbjct: 175 VLSYPKQTFP---GLVTLIEPNLDPLTRTVN------VRITLDNKERL-----LKPGM 218


>gi|225627807|ref|ZP_03785844.1| HlyD family secretion protein [Brucella ceti str. Cudo]
 gi|265998464|ref|ZP_06111021.1| secretion protein HlyD family protein [Brucella ceti M490/95/1]
 gi|225617812|gb|EEH14857.1| HlyD family secretion protein [Brucella ceti str. Cudo]
 gi|262553088|gb|EEZ08922.1| secretion protein HlyD family protein [Brucella ceti M490/95/1]
          Length = 391

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 71  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 128

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 129 AQLRRAEIGIDTAQSFVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 188


>gi|165976254|ref|YP_001651847.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|165876355|gb|ABY69403.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
          Length = 353

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 106/324 (32%), Gaps = 32/324 (9%)

Query: 103 IKNLRCHIDTEKSALDFL----NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           I ++   I+ E+  +  L      +  + E    S+ + L+        +        I+
Sbjct: 33  IASVNGRIEVERLDIASLYAGRVEEIYIQEGQDVSKNQPLVRLSSSQSQSQVNSAQAQIA 92

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +   S+     + R           + +  +   +  + +L+  KNL   N +S ++L +
Sbjct: 93  AAEASVNNAQAQKRRATEAVSRANAEIAAQQQKANIAKLELSNAKNLHRDNLISSSELER 152

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           ++     S   +      +      I +                   + Q + T     +
Sbjct: 153 RQANYKASLAAVETAKAAKAEAQATITQAQ---------------ATISQAEATVNQAKA 197

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                +   +   I +P+ G I   +     +       ++ ++  +   Y+   +   Q
Sbjct: 198 FAEQADSQNDDMLIRAPLDGRI-EYKIAMLGSIVGIGGKVVSLL-DTSTVYLNVFLPAHQ 255

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKI 393
              V+    A ++      +    F A +  +         S + +  +++  +++ L+I
Sbjct: 256 SNLVRLNDEARIKIDGSDIV----FPAKVVFVASEAQFTPKSVETSEERSKLMFKIKLQI 311

Query: 394 -TDLAFSDNNIELRNGFPAEVLFT 416
            TD+A    N+ L+ G  A     
Sbjct: 312 PTDIAIQHKNL-LKGGMTAMGYVK 334


>gi|150006027|ref|YP_001300771.1| ABC transporter permease [Bacteroides vulgatus ATCC 8482]
 gi|254881801|ref|ZP_05254511.1| ABC transporter permease [Bacteroides sp. 4_3_47FAA]
 gi|294776659|ref|ZP_06742126.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
           PC510]
 gi|319641179|ref|ZP_07995881.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
 gi|149934451|gb|ABR41149.1| ABC transporter permease [Bacteroides vulgatus ATCC 8482]
 gi|254834594|gb|EET14903.1| ABC transporter permease [Bacteroides sp. 4_3_47FAA]
 gi|294449469|gb|EFG18002.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
           PC510]
 gi|317387220|gb|EFV68097.1| ABC transporter permease [Bacteroides sp. 3_1_40A]
          Length = 416

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 81/227 (35%), Gaps = 22/227 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           V   G++L    ++ + +   G +++   E G+ + +G  +L   +       +++   +
Sbjct: 62  VRVIGQVLPS-RMIYLDAIEGGRVEERLHEEGAMVKKGDVILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY- 155
             ++  ++N R  ++ E+ +L              + R  Q    +              
Sbjct: 121 AYQENELRNTRISMEQERLSLKQDRIGIQKEFIIKKRRYGQYKRLMEGQLIAREDYLQAT 180

Query: 156 -GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +V   L +   R+R   L RL    + S L   + + ++ L +++   E       
Sbjct: 181 EEYEAVKEQLSVLDERIRQDSLFRL---TQISSLDENIMNMKRSLALVRERLEN------ 231

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              + +  +      L   I +  +   HI ++   A+L+    + E
Sbjct: 232 --LKVKAPIDGQVGNLEAQIGQSISAGEHIGQIIT-ADLKVQALIDE 275



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 68/202 (33%), Gaps = 25/202 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+   RL L+     ++      ++     K L E
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQERLSLKQDRIGIQKEFIIKKRRYGQYKRLME 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
              +++ D  Q             E     K  L  ++E   + +L     +  +  ++ 
Sbjct: 168 GQLIAREDYLQA-----------TEEYEAVKEQLSVLDERIRQDSLFRLTQISSLDENIM 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+ A    +L       E   + +PI G +   ++          + + +I+     
Sbjct: 217 NMKRSLALVRERL-------ENLKVKAPIDGQVGNLEA-QIGQSISAGEHIGQIITAD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTAT 349
             ++A +    ++ V +   A 
Sbjct: 267 LKVQALIDEHYVERVVQELPAD 288


>gi|319955420|ref|YP_004166687.1| abc transport system, lipoprotein [Cellulophaga algicola DSM 14237]
 gi|319424080|gb|ADV51189.1| putative ABC transport system, lipoprotein [Cellulophaga algicola
           DSM 14237]
          Length = 300

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 91/244 (37%), Gaps = 30/244 (12%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           + L R  L+   +++ +        + ++    +   ++++ +    R    +  +L + 
Sbjct: 73  LALKREQLQVSKAIISSKSKGVLSQINVLNAKLKTGNINKDRMQHLIRDNAGTQKQLDDV 132

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             E   +   I  +  + N    N LK I   L+Q              L+    +  I+
Sbjct: 133 QGEIAVIKSQIKSVEIQ-NAPVVNELKAIDVQLKQ--------------LDDQIGKSKII 177

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +PIAGT++  +    +      +PL KI  + K+  +R  V+  Q+  +K     TV+  
Sbjct: 178 NPIAGTVLT-KYMEPNEIVSFGKPLYKIA-NLKMMQLRVYVSETQLASLKIDQEVTVKID 235

Query: 354 HYADIREKKFKAIIEKIDPIIS-----QQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
                  K +K  I  +           Q    +T   Y V + +      +N+  ++ G
Sbjct: 236 --DGAAMKSYKGRIRWVASEAEFTPKIIQTKEERTALVYAVKIDV------ENDGRIKIG 287

Query: 409 FPAE 412
            PAE
Sbjct: 288 MPAE 291


>gi|299133463|ref|ZP_07026657.1| efflux transporter, RND family, MFP subunit [Afipia sp. 1NLS2]
 gi|298591299|gb|EFI51500.1| efflux transporter, RND family, MFP subunit [Afipia sp. 1NLS2]
          Length = 417

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 57/140 (40%), Gaps = 7/140 (5%)

Query: 45  SSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            + G+I  +++    + SP++G + K  V  G  + QG PL   E  +T   +  +   I
Sbjct: 86  ITEGKISIDEDRSTQVFSPYTGRVTKLLVRAGDHVEQGQPLFVLEATDT---VQAQNEFI 142

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             L       +SALD    +    ++ F+ +   L D+     +         + S   +
Sbjct: 143 AALTATNKA-RSALDLAQTQGKRAKELFDGKAVPLKDYQSAQATEVQA--ENDMRSAQTA 199

Query: 164 LKMKLTRMRSIYLNRLDLEN 183
           L+    R++ + L+   + +
Sbjct: 200 LEASRNRLKILGLSDAAIAS 219



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 56/190 (29%), Gaps = 30/190 (15%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL- 247
           R+ L   Q      K LF+  AV   D    +    ++  ++R      +     +  L 
Sbjct: 152 RSALDLAQTQGKRAKELFDGKAVPLKDYQSAQATEVQAENDMRSAQTALEASRNRLKILG 211

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +A +        I+ +L                        T++SPIAGT+V  +   
Sbjct: 212 LSDAAIASFQDKGSINPEL------------------------TVVSPIAGTVVQRKV-G 246

Query: 308 SSNYAQQS--QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR-FPHYADIREKKFK 364
              Y       P+  I       ++   V       V  G   +          R  +  
Sbjct: 247 PGQYINAGATDPVFVIG-DLSTVWLTGYVREVDADDVAVGQDVSFTVLSSPGRTRTARIN 305

Query: 365 AIIEKIDPII 374
            +   IDP+ 
Sbjct: 306 YVATAIDPVT 315


>gi|297570090|ref|YP_003691434.1| efflux transporter, RND family, MFP subunit [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296926005|gb|ADH86815.1| efflux transporter, RND family, MFP subunit [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 383

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 59/170 (34%), Gaps = 4/170 (2%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           ++  +    I S  S  I+   V  G ++  G  L+  +D E     +      +     
Sbjct: 71  VIAAEQEAVISSRLSAPIRDLPVRAGQRVKAGDLLVVLDDREWRQEHERLAFQAEATAAE 130

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +   +  L     + + L +      E L +   +  +  + +     +    + ++  T
Sbjct: 131 LKLARQQL----ARREQLHREGAITLESLEESQARVQTLTASLAAGRQAEQAAATRLGYT 186

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           R+++ +   +         +A+L     +L   + L  +  V Q +L + 
Sbjct: 187 RIKAPFSGTVGRLQALPGDQAVLGQPLLELFNGEQLKAEFVVPQQELARL 236



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 12/203 (5%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           +QE        E      +         E            L+E    ++    + A   
Sbjct: 114 RQEHERLAFQAEATAAELKLARQQLARREQLHREGAITLESLEESQARVQTLTASLAAGR 173

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
                         I +P +GT+   Q+    + A   QPL+++  + +       V  +
Sbjct: 174 QAEQAAATRLGYTRIKAPFSGTVGRLQAL-PGDQAVLGQPLLELF-NGEQLKAEFVVPQQ 231

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           ++  +  G    V  P +      ++   ++++ P +                + +    
Sbjct: 232 ELARLTPGRPVRVSVPGFD----GEWHGSLDRLHPDLKPPGRGA------RAEILLPAGP 281

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
                  LR G  A V   A   
Sbjct: 282 GDRRPNILRPGMIASVRVLALER 304


>gi|167555176|ref|NP_001107893.1| p90 autoantigen [Danio rerio]
 gi|160773423|gb|AAI55118.1| Zgc:174160 protein [Danio rerio]
          Length = 896

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 69/203 (33%), Gaps = 9/203 (4%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                D      +  R   + E   L  L    +  ++  ++     L  + +  S   +
Sbjct: 654 ALSQADRLIAQYRCQRAQAEAEARKLASLLKDTERRKEDLQAELNDQLLEVERLKSDSQQ 713

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +  +  +   +++  +   ++  Y   L   +KS      L +    LT       +   
Sbjct: 714 LLQH--NGRLQAVADQHQGLKGTYNQLLSRYDKSEGTLKDLQAAHISLTQQ----AEGLR 767

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             N+  + ++   ++  EL E   + K +   + E  D       N L+     +++ + 
Sbjct: 768 KTNEGLRLQQE--RTLAELAEKEQQIKGLKADVLE-KDSNITGLQNELRRQEEQIKEMEE 824

Query: 272 TFADEMSKLTILEKTREQKTILS 294
             +    +L   E+ R+  +I +
Sbjct: 825 NISILRKELNKTEQARKDTSIKA 847


>gi|153005244|ref|YP_001379569.1| RND family efflux transporter MFP subunit [Anaeromyxobacter sp.
           Fw109-5]
 gi|152028817|gb|ABS26585.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter sp.
           Fw109-5]
          Length = 530

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/150 (10%), Positives = 46/150 (30%), Gaps = 11/150 (7%)

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             E     +E++    ++       ++          +  + +P+ GT+V   + +  + 
Sbjct: 295 RKEAEEARRELAAAQAEHDAARGSLVAAGAAPGAAAGRHVLRAPLDGTVVSRDAVAGRSV 354

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               Q LM+I       +   +V       V+ G    V       +     +  I ++ 
Sbjct: 355 -SAGQVLMEIA-DLSRMWAELEVPEATAGRVQPGQPVRVTL---EGVPGGPLEGKIARVS 409

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           P +      +         +++ +   +  
Sbjct: 410 PRVDPASRTV------RARVELPNPRRALK 433


>gi|119513062|ref|ZP_01632117.1| hypothetical protein N9414_17717 [Nodularia spumigena CCY9414]
 gi|119462272|gb|EAW43254.1| hypothetical protein N9414_17717 [Nodularia spumigena CCY9414]
          Length = 436

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 81/229 (35%), Gaps = 21/229 (9%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E+  DF+    S  S      I      + +K     +     + +++  + +  + ++ 
Sbjct: 79  EESSDFVASLESQRSVQIQSKIPGQVTQIFLKSGEPVTAGTAIIQVDSGQATIDEMNAAR 138

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q  ++       +NA ++    +  R+ + + L+L++  +E+   L     +   A  + 
Sbjct: 139 QAAVSQ-----RENARAKLQSLEAARLSHIADLQLQQQDYERYAELAAQGAVSRRARDQS 193

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI--------------LSPIAGTIV 301
           A+ L      L         E + ++  EK  +Q  I               +P +GT+ 
Sbjct: 194 ASRLATAKAHLSAINSQIQTEQASISQGEKALQQAEINIKNRQLQPQSYKIKAPFSGTVG 253

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
                   +    S PL+  V  ++   +   V   Q   ++KG    V
Sbjct: 254 DISV-QVGDLVNTSTPLVT-VSQNQPLEVNISVPSAQSTQLRKGMPVEV 300



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/149 (11%), Positives = 51/149 (34%), Gaps = 3/149 (2%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT-DLIDLKKVSIKNLR--CH 109
               V+I+S   G + +  +++G  +  GT ++  +  + T D ++  + +  + R    
Sbjct: 90  SQRSVQIQSKIPGQVTQIFLKSGEPVTAGTAIIQVDSGQATIDEMNAARQAAVSQRENAR 149

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
              +      L++  D+  +  +      L   G             +++    L    +
Sbjct: 150 AKLQSLEAARLSHIADLQLQQQDYERYAELAAQGAVSRRARDQSASRLATAKAHLSAINS 209

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           ++++   +    E         + + Q  
Sbjct: 210 QIQTEQASISQGEKALQQAEINIKNRQLQ 238


>gi|71656402|ref|XP_816749.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70881897|gb|EAN94898.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 1238

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 5/206 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E ++  +  +  ++ LR   +  +   +        + +  E  + QL +   +     +
Sbjct: 298 ELSEQAEDLQRQLEELRAENEELRGEHEHKTRGLQEVSEQAEDLQRQLEELRVENEELRA 357

Query: 151 KVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
           +  N   G+  V    +    ++  +     +L  +       L    +    ++   E+
Sbjct: 358 EHENKTRGLQEVSEQAEDLQRQLEELRAENEELRAEDEHKTRGLQEVSEQAEDLQRRLEE 417

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY---LKEISRD 265
                 +L  ++    +   EL E   + +  L  +    +E   E  N    L+E+S  
Sbjct: 418 LRAENEELRAEDEHKTRGLQELSEQAEDLQRQLEELRAENEELRAEDENKTRGLREVSEQ 477

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT 291
            E  QR   +  ++   L    E KT
Sbjct: 478 AEDLQRQLEELRAENEELRAEHEHKT 503



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 69/206 (33%), Gaps = 5/206 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E ++  +  +  ++ LR   +  ++  +        + +  E  + QL +   +      
Sbjct: 473 EVSEQAEDLQRQLEELRAENEELRAEHEHKTRGLQEVSEQAEDLQRQLEELRAENEELRG 532

Query: 151 KVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
           +  +   G+  V    +    R+  +     +L  +       L    +    ++   E+
Sbjct: 533 EHEHKTRGLREVSEQAEDLQRRLEELRAENEELRAEDEHKTRGLREVSEQAEDLQRQLEE 592

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY---LKEISRD 265
                 +L  +     +   E+ E   + +  L  +    +E   E  +    L+E+S  
Sbjct: 593 LRAENEELRGEHEHKTRGLREVSEQAEDLQRQLEELRAENEELRAEDEHKTRGLREVSEQ 652

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT 291
            E  QR   +  ++   L    E KT
Sbjct: 653 AEDLQRQLEELRAENEELRAEDEHKT 678


>gi|326678008|ref|XP_002667379.2| PREDICTED: myosin heavy chain, fast skeletal muscle [Danio rerio]
          Length = 1934

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 82/214 (38%), Gaps = 12/214 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ----LLDFLG 143
            +  E+ + ++ K  S++  +  +  E   L     + + L    + ++      L ++  
Sbjct: 1399 DAEESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQ 1458

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY    +++   G     RSL  ++ +M++ Y   LD   +   L+    + Q++++ + 
Sbjct: 1459 KYEEGQAEL--EGAQKEARSLSTEIFKMKNSYEEALD---QLETLKRENKNLQQEISDLT 1513

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                +   S ++L + ++ V    +E++  + E +  L H         LE      EI 
Sbjct: 1514 EQLGETGKSIHELEKAKKTVESEKVEIQTALEEAEGTLEHEESKILRVQLELNQVKSEID 1573

Query: 264  RDLEQNQRTFADEM---SKLTILEKTREQKTILS 294
            R L +             ++    ++     + S
Sbjct: 1574 RKLAEKDEEIEQIKRNSQRVLDAMQSTLDSEVRS 1607



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 86/229 (37%), Gaps = 24/229 (10%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREE--QL 138
            L  +  ++   +  +  +++ ++  ++ EKS     +D L++  + + KA  + E+  + 
Sbjct: 1192 LRKKQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLSSNMEAVAKAKANLEKMCRT 1251

Query: 139  LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            L+       T S      ++ +        T          + E   S L     ++ + 
Sbjct: 1252 LEDQLSEIKTKSDENIRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAYTQQ 1311

Query: 199  LTMMKNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +K   E+   ++N L               +Q     ++  EL+  + +  + +   
Sbjct: 1312 IEELKRHVEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQW 1371

Query: 245  NELYD----EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               Y+    +   E     K++++ L+  + +     SK   LEKT+++
Sbjct: 1372 RTKYETDAIQRTEELEESKKKLAQRLQDAEESIEAVNSKCASLEKTKQR 1420



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 74/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K   I      I+ E+S    L  K   L+   
Sbjct: 1056 EGDLKLAQESIMDLENDKQQSEEKIKKKDFEISQFLSKIEDEQSLGAQLQKKIKELQARI 1115

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1116 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1169

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1170 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1224

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +       + +   +LE+  RT  D++S++        ++
Sbjct: 1225 KMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKTKSDENIRQ 1269



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 77/255 (30%), Gaps = 38/255 (14%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID--------TEKSALDF------LN 121
             + ++G   +  +        +L +  I+ LR  ++         E+  +D       L+
Sbjct: 1658 DEAVRGQEDMKEQVAMVERRNNLMQAEIEELRAALEQTERGRKVAEQELVDASERVGLLH 1717

Query: 122  NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL--TRMRSIYLNRL 179
            ++   L    +  E  L+   G+      +  N    +        +    ++       
Sbjct: 1718 SQNTSLINTKKKLEADLVQIQGEVDDAVQEARNAEEKAKKAITDAAMMAEELKKEQDTSA 1777

Query: 180  DLENKSSLLRALLSSHQKDLTMMKNLFEKN-------AVSQNDLNQQE------------ 220
             LE     L   +   Q  L   +NL  K          S+    + E            
Sbjct: 1778 HLERMKKNLEVTVKDLQHRLDEAENLAMKGGKKQLQKLESRVRELESEVEAEQRRGADAV 1837

Query: 221  ---RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               R   +   EL     E K  +  + +L D+  L+   Y ++     EQ     +   
Sbjct: 1838 KGVRKYERRVKELTYQTEEDKKNVTRLQDLVDKLQLKVKAYKRQAEEAEEQANTHLSRYR 1897

Query: 278  SKLTILEKTREQKTI 292
                 +E+ +E+  I
Sbjct: 1898 KVQHEMEEAQERADI 1912


>gi|294648950|ref|ZP_06726400.1| heavy metal RND efflux membrane fusion protein CzcB [Acinetobacter
           haemolyticus ATCC 19194]
 gi|292825166|gb|EFF83919.1| heavy metal RND efflux membrane fusion protein CzcB [Acinetobacter
           haemolyticus ATCC 19194]
          Length = 499

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 24/171 (14%)

Query: 252 NLEFANYLKEISRDLEQNQRTFADEM-------SKLTILEKTREQKTILSPIAGTIVYNQ 304
             EF   L+   R L Q  R     +        ++    + +   T+ +PI+G I   +
Sbjct: 173 QTEFLAVLRTGDRSLIQASRQRLQLLGIPQNVIHQVERTRRVQSNITLQAPISGFIDSLE 232

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q L  I   +   ++ A V  KQI  +K+G +    F  ++     K  
Sbjct: 233 VRN-GMALAMGQTLATIKGIN-PIWLEAAVPEKQIAGIKRGMSVEANFAAFSQ----KVT 286

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  I P +      +      +V +++++ +      +L+ G  A V  
Sbjct: 287 GKVIDILPTLDTTSRTI------KVRIELSNPS-----GQLKPGMFASVNI 326


>gi|262280743|ref|ZP_06058526.1| HlyD family secretion protein [Acinetobacter calcoaceticus RUH2202]
 gi|262257643|gb|EEY76378.1| HlyD family secretion protein [Acinetobacter calcoaceticus RUH2202]
          Length = 333

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/152 (10%), Positives = 46/152 (30%), Gaps = 3/152 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++ S  +G++ +  V++   + +G  L   +       ++  K  +   +    
Sbjct: 44  VRGDVIQVSSDVAGLVTEVLVQDNQSVKKGQVLFKIDVSRRALDVEQAKSDLAKAKAAFA 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++ L          +      E+    +        SK        V+ +        
Sbjct: 104 QSQAGLAQAKANLIKSDTNIRLAEKNASRYSNLMDGAISK---QEQDQVFATRDQSHAEH 160

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             +       E      +AL+ +    L + +
Sbjct: 161 EQLQAAIEQAEATVKQQQALIEAATSSLHLAE 192



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 67/193 (34%), Gaps = 3/193 (1%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           LD+E   S L    ++  +    +         S  ++   E+   + +  +   I +Q+
Sbjct: 86  LDVEQAKSDLAKAKAAFAQSQAGLAQAKANLIKSDTNIRLAEKNASRYSNLMDGAISKQE 145

Query: 239 NMLRHINELYDEANLEFANY-LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                       A  E     +++    ++Q Q       S L + E    +  +++P  
Sbjct: 146 QDQVFATRDQSHAEHEQLQAAIEQAEATVKQQQALIEAATSSLHLAELNMHRAAVIAPAD 205

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           GT + N   S  NY Q  Q +  ++   K  Y+       ++  +  G  ATV+      
Sbjct: 206 GT-LSNFDMSPGNYVQVGQAVAALL-DRKQLYVVGYFEETKLNRIHVGDQATVQLMGDNQ 263

Query: 358 IREKKFKAIIEKI 370
             +   + I   I
Sbjct: 264 KIKGHVQGIASGI 276


>gi|261822192|ref|YP_003260298.1| hypothetical protein Pecwa_2942 [Pectobacterium wasabiae WPP163]
 gi|261606205|gb|ACX88691.1| secretion protein HlyD family protein [Pectobacterium wasabiae
           WPP163]
          Length = 342

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/354 (12%), Positives = 99/354 (27%), Gaps = 88/354 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I    V+ G  +  G  L T +     +     + ++ + +  +   +         
Sbjct: 51  GGRIAGLNVDEGDTVQAGQTLATLDAAPYMNAQHQAQANLASAQAQLQLAQEGY------ 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                     R+E++     +   +                                   
Sbjct: 105 ----------RQEEIAQVRSQVAQSQ---------------------------------- 120

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A            + L++K A+S + L+       ++   L+            
Sbjct: 121 ------AAYDYANSFYQRQQGLWDKRAISADMLDDARTARNQALATLQA----------- 163

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                     E  N  +EI+       +  A     L   E  R+   +L+P  G I+  
Sbjct: 164 --AKDKLTQFERGNRPQEIAAAQATVAQAEAG----LAQAELDRQDTELLAPSPGVILT- 216

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++    +       +  +   ++  ++RA V+ K++  V  G        +      + +
Sbjct: 217 RAAEKGSMLATGCTVFTLS-LTRPVWVRAYVSEKELGRVVPGSQ---MLIYTDGRPNQPY 272

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              I  + P       S +  +L+T   Y + + + D         LR G P  
Sbjct: 273 HGKIGFVSPSAEFTPKSVETEDLRTDLVYRLRIVVNDPDDG-----LRQGMPVT 321


>gi|71032907|ref|XP_766095.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68353052|gb|EAN33812.1| hypothetical protein, conserved [Theileria parva]
          Length = 1947

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 79/212 (37%), Gaps = 11/212 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              E I+  + +D  K             +S L  L  + +  E +    E +L     + 
Sbjct: 964  ELEKIKLQEQLDTIKSKKDAEDLEKIKLQSELATLKAQKESEELSRIRLESELATLKAQK 1023

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             S   +        +   L    ++  S  L+R+ LE++   L+A   S ++    ++  
Sbjct: 1024 ESEELEKIK-----LQSELATLKSQKESEELSRIRLESELDTLKAQKESEEQARIRLQE- 1077

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +   +S+N +   E    +   EL     E +  L  I    + ++ E     KE+S  
Sbjct: 1078 EQNRIISENQM-ALEEQKREFDAELERQNSELQKQLEQIRIDLEHSDRERRLLEKELSDQ 1136

Query: 266  LEQNQRTFADEMSKLTIL----EKTREQKTIL 293
            L+  +    D++ +L       E  REQ+TI 
Sbjct: 1137 LQIQKENDPDKILELERARLRDEWNREQETIK 1168



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 73/198 (36%), Gaps = 12/198 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
               + E +D + ++K +  +    ++  +   D  N + + +++ +E  +E L   + + 
Sbjct: 1303 RLLEKELSDQLQIQKENDPDKILELERAR-LRDEWNREQETIKRKWEESQEHLRKEMIRM 1361

Query: 146  HSTCSKVFNYGISS---------VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 +                 +   L    ++  S  L R+ LE++   L+A   S +
Sbjct: 1362 QKELEEQDRIKAQKESDELEKIKLQEQLDTLKSKKESEELARIRLESELDTLKAQKESEE 1421

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +    ++   +   +S+N +   E    +   EL     E +  L  I    + ++ E  
Sbjct: 1422 QARIRLQE-EQNRIISENQM-ALEEQKREFDAELERQNSELQKQLEQIRIDLEHSDRERR 1479

Query: 257  NYLKEISRDLEQNQRTFA 274
               KE+S  L+  Q    
Sbjct: 1480 LLEKELSEQLQIQQENVE 1497



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 86/221 (38%), Gaps = 16/221 (7%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
               + E +D + ++K +  +    ++  +   D  N + + +++ +E  +E L   + + 
Sbjct: 1127 RLLEKELSDQLQIQKENDPDKILELERAR-LRDEWNREQETIKRKWEESQEHLRKEMIRM 1185

Query: 146  HST---------CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                          +        +   L    ++  S  L+R+ LE++   L+A   S +
Sbjct: 1186 QKELEEQDRIKAQKESEELEKIKLQSELATLKSQKESEELSRIRLESELDTLKAQKESEE 1245

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +    ++   +   +S+N +   E    +   EL     E +  L  I    + ++ E  
Sbjct: 1246 QARIRLQE-EQNRIISENQM-ALEEQKREFDAELERQNSELQKQLEQIRIDLEHSDRERR 1303

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTIL----EKTREQKTIL 293
               KE+S  L+  +    D++ +L       E  REQ+TI 
Sbjct: 1304 LLEKELSDQLQIQKENDPDKILELERARLRDEWNREQETIK 1344



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 7/170 (4%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            E   +I         E I+  + +D  K   ++        +S LD L  + +  E+A  
Sbjct: 1366 EEQDRIKAQKESDELEKIKLQEQLDTLKSKKESEELARIRLESELDTLKAQKESEEQARI 1425

Query: 133  SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              +E+    + +      +      + + R       ++  I   R+DLE+     R L 
Sbjct: 1426 RLQEEQNRIISENQMALEEQKREFDAELERQNSELQKQLEQI---RIDLEHSDRERRLLE 1482

Query: 193  SSHQKDLTMMKNLFEKNA----VSQNDLNQQERIVYKSTLELRENIHEQK 238
                + L + +   E+N+      +N+L            E+ ++  E K
Sbjct: 1483 KELSEQLQIQQENVERNSSTDQTGKNELPLIPASAGGLKSEISQSDVEIK 1532


>gi|294142545|ref|YP_003558523.1| cation efflux protein [Shewanella violacea DSS12]
 gi|293329014|dbj|BAJ03745.1| cation efflux protein, putative [Shewanella violacea DSS12]
          Length = 435

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/249 (12%), Positives = 82/249 (32%), Gaps = 13/249 (5%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +         +  ++   + + Q  D    +     +           + +  L  +   
Sbjct: 62  AGFPSTAFAAEGHDQVAVTAKVQAEDDGHGHGQGAGEESQEEHGLKLTAEQQALAGIEVT 121

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNL----FEKNAVSQNDLNQQER-------IV 223
            ++      ++  +  L+    + +T+   L      ++ V   ++++ +         V
Sbjct: 122 QVSEETFSLEAVAMATLVVDRDRTMTLAPQLDVRVLARHVVPGQEVSKGDPLLTLGGVAV 181

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            ++  +      E   + R        +    A    E+ R + +  +  + +++ L   
Sbjct: 182 AQAQADYINAAAEWSRVKRMGKSAVSASRRLQAQVDAELKRAILEAMKMTSAQIATLASS 241

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
             T     +L+PI G +  + +            LM++       ++ A+VTP Q + + 
Sbjct: 242 PDTIGSYRLLAPIDGRVQQDLAM-LGQVFSSGTALMQLT-DESHLWVEAQVTPAQSESIS 299

Query: 344 KGYTATVRF 352
            G  A VR 
Sbjct: 300 VGSEALVRV 308


>gi|222530542|ref|YP_002574424.1| RND family efflux transporter MFP subunit [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222457389|gb|ACM61651.1| efflux transporter, RND family, MFP subunit [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 388

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 91/246 (36%), Gaps = 16/246 (6%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQ 237
           +D+ +K      LL    +DL++   + +K   +++  L   +++  + + + + ++   
Sbjct: 79  VDVGDKVKKGDKLLELETQDLSIQYKIAQKQLEMAKLQLESLKKLKERWSSQNQSSLQNS 138

Query: 238 KNMLRHIN-ELYDEANLEFAN--YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              ++  +      + ++ A+  Y  +    L++ Q   A    +       ++Q+ + +
Sbjct: 139 TAPIQSYSLNTLTSSQMQVASPGYSLDDQIKLQEKQVEIAQLNLQSIKQNMDKQQRYVKA 198

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
            I G +    +    N     Q     V   +   I   V      ++ +G  A +RF  
Sbjct: 199 QINGVVTAINAR-EGNVFSSVQLPAVTVEDPENLQIVLNVNQYDAINISEGQKALIRFG- 256

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
                EK F   ++ + P  ++       +   +V + I      +N+  ++ GF  +V 
Sbjct: 257 -----EKTFDGAVKMVSPAATKVITQTGAENVVKVYVDI-----LNNDGTIKPGFNVDVD 306

Query: 415 FTAKNT 420
                 
Sbjct: 307 IKLGEK 312



 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 53/137 (38%), Gaps = 8/137 (5%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + K  V+ G ++ +G  LL  E  + +    + +  ++  +  +++ K   +  +++   
Sbjct: 74  VLKVFVDVGDKVKKGDKLLELETQDLSIQYKIAQKQLEMAKLQLESLKKLKERWSSQ--- 130

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRLDLENKS 185
                +S  +     +  Y           ++S   SL  ++  + + + + +L+L++  
Sbjct: 131 ----NQSSLQNSTAPIQSYSLNTLTSSQMQVASPGYSLDDQIKLQEKQVEIAQLNLQSIK 186

Query: 186 SLLRALLSSHQKDLTMM 202
             +       +  +  +
Sbjct: 187 QNMDKQQRYVKAQINGV 203


>gi|170288381|ref|YP_001738619.1| RND family efflux transporter MFP subunit [Thermotoga sp. RQ2]
 gi|281412412|ref|YP_003346491.1| efflux transporter, RND family, MFP subunit [Thermotoga
           naphthophila RKU-10]
 gi|170175884|gb|ACB08936.1| efflux transporter, RND family, MFP subunit [Thermotoga sp. RQ2]
 gi|281373515|gb|ADA67077.1| efflux transporter, RND family, MFP subunit [Thermotoga
           naphthophila RKU-10]
          Length = 335

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 47/143 (32%), Gaps = 16/143 (11%)

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L   ++  E  T++SP+ G +         +       ++ IV  +    +   ++   +
Sbjct: 125 LEKAKENLENTTVVSPVNGVVQSVNVD-VGDSVSVGTSIVTIV-ETDTLRVEGSISEYDL 182

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           ++VK+G  A   F              +++I P+               V +   + +F 
Sbjct: 183 KNVKEGMKAVFTFEQLGLT----LTGKVKRISPVAETSGG---------VTVIPVEFSFD 229

Query: 400 DNNIEL-RNGFPAEVLFTAKNTT 421
                L   G   +V    K  T
Sbjct: 230 QIPPSLVIPGLTCDVEIIIKEAT 252



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
            +V   G++  +    ++ S  SG + +  VE G  +  G  +   +D +  
Sbjct: 54  ETVEIVGQVTADT--KKVTSKVSGDVLEIYVEEGDVVQVGQKIAKIDDTDYQ 103


>gi|126322956|ref|XP_001364270.1| PREDICTED: similar to plectin 11 isoform 2 [Monodelphis domestica]
          Length = 4553

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/191 (10%), Positives = 62/191 (32%), Gaps = 12/191 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
               R  +   ++ L+      +   +A    E +  +   +     ++     + + ++ 
Sbjct: 1357 AEERQRLAEVEAQLEKQRQLAEAHAQAKAQAEREAQELQRRMQEEVARREVVAVDAQHQK 1416

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            L ++    +    + L+++ K+  +     +  +    ++       V +  L   ER  
Sbjct: 1417 LNIQQELQQLRQNSDLEIKAKAQQVEEAERNRLRIEEEIR-------VIRLQLETTERQK 1469

Query: 224  YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              +  EL+      +       +  +EA        +E      Q +R   +E+      
Sbjct: 1470 SGAESELQALRARAEEAELQKKQAQEEAERLRRQVKEE-----SQKKRQAEEELRLKIQA 1524

Query: 284  EKTREQKTILS 294
            E+   ++   +
Sbjct: 1525 EQEAAREKQRA 1535



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 1/134 (0%)

Query: 160  VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQNDLNQ 218
            +    + +L  + +    +  L    +  +A      ++L   M+    +  V   D   
Sbjct: 1355 LKAEERQRLAEVEAQLEKQRQLAEAHAQAKAQAEREAQELQRRMQEEVARREVVAVDAQH 1414

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            Q+  + +   +LR+N   +        E  +   L     ++ I   LE  +R  +   S
Sbjct: 1415 QKLNIQQELQQLRQNSDLEIKAKAQQVEEAERNRLRIEEEIRVIRLQLETTERQKSGAES 1474

Query: 279  KLTILEKTREQKTI 292
            +L  L    E+  +
Sbjct: 1475 ELQALRARAEEAEL 1488



 Score = 44.2 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 77/212 (36%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR     E++ L     + +      + +EE       
Sbjct: 1457 VIRLQLETTERQKSGAESELQALRAR--AEEAELQKKQAQEEAERLRRQVKEE------S 1508

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +      +     I +   + + K   ++++   RL  E     ++   +  +K+  +  
Sbjct: 1509 QKKRQAEEELRLKIQAEQEAAREKQRALQALEELRLQAEEAERRMKQ--AEVEKERQVQV 1566

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---ANYLK 260
             L      ++ +L  +     + T +L  ++ ++   + H+ E  +    +      + +
Sbjct: 1567 ALETAQRSAEVELQSKRMSFAEKTAQLELSLKQEHITVTHLQEEAERLKRQQAEAERFRE 1626

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  ++LE+ +    D +      E+   QKT+
Sbjct: 1627 EAEKELEKWRAKANDALRMRLQAEEIAHQKTL 1658



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 72/222 (32%), Gaps = 16/222 (7%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                +  +  K          +  +  L+    K +   +     EE             
Sbjct: 1605 THLQEEAERLKRQQAEAERFREEAEKELEKWRAKANDALRMRLQAEEIAHQKTLAQEEAE 1664

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR---ALLSSHQKDLTMMKNLF 206
             +  +    +  RS K + + +R   L   +LE +  L         S +++L  +K   
Sbjct: 1665 KQKEDAEREARKRS-KAEESALRQKELAEQELEKQRKLAEGTAQQKLSAEQELIRLKAET 1723

Query: 207  EKN-----------AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            E                +N++++  +   +   EL +   E + +L    +  +E+    
Sbjct: 1724 ENGEQQRLLLEEELFRLKNEVSEAIQKRKEVEEELAKVRAEMEILLESKAKTEEESRSTS 1783

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                + +  +     R  A+E ++L  L +  +++  L+   
Sbjct: 1784 EKSKQRLEAE-ASKFRELAEEAARLRALSEEAKRQRQLAEED 1824



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/193 (12%), Positives = 66/193 (34%), Gaps = 8/193 (4%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            + ++   +  L+  I+ E   L   +          E+ + + +       S  ++    
Sbjct: 2234 VKIQMEELVKLKARIEEENKMLILKDKDNTQKFLVEEAEKMKQVAEEAARLSVEAQEAAR 2293

Query: 156  GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QN 214
                    L  +      +   ++    +++ L+A     QK     K+L +++A   Q 
Sbjct: 2294 LRKLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAEMLQKQ----KDLAQEHAKKLQE 2349

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY---LKEISRDLEQNQR 271
            D +Q E+ + + T   ++ +  ++     ++   +   L          +   D  + ++
Sbjct: 2350 DKDQMEQRLAQETEGFQKTLEAERRRQLEMSAEAERLKLHVTEMSLAQAKAEEDARKFKK 2409

Query: 272  TFADEMSKLTILE 284
               +   KL   E
Sbjct: 2410 QAEEIGEKLHRTE 2422



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 65/218 (29%), Gaps = 18/218 (8%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            E+     L + +    + L       K+ ++          ++   R++ L+D   K   
Sbjct: 1863 ENERLRRLAEDEAYQRRLLEEQAAQHKADIEEKIALLKKSSESELERQKGLVDDTLKQRR 1922

Query: 148  TCS----------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL-----L 192
                         +  + G + +   L    +    I  ++   E ++   R L      
Sbjct: 1923 IIEEEIRILKINFEKASAGKTDLELELGRIKSSAEEIQRSKEQAEQEAEKQRQLALEEEQ 1982

Query: 193  SSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               + +  + K L  +   ++     L + ER+  K     R+    +K   R I    +
Sbjct: 1983 RRREAEEKVKKILAAEQEAARQRKAALEEVERLKAKVEEAKRQKELAEKESERQIQLAEE 2042

Query: 250  EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             A        K     ++Q ++       +   +    
Sbjct: 2043 AAQKRLQAEEKAHVFAVQQKEQELLQTRRQEQSVLDKL 2080


>gi|85375036|ref|YP_459098.1| hypothetical protein ELI_11045 [Erythrobacter litoralis HTCC2594]
 gi|84788119|gb|ABC64301.1| hypothetical protein ELI_11045 [Erythrobacter litoralis HTCC2594]
          Length = 336

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 5/133 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+ +G +      ++I +  SG++   +V+ G  + +G PL T +       +      I
Sbjct: 59  VAGAGVVEPSSETIQIGTALSGLVTDLRVQPGDYVEKGQPLFTVDTRAIRAQLQQANAQI 118

Query: 104 KNLRCHID----TEKSALDFLNNKYDVLEKAFESREEQL-LDFLGKYHSTCSKVFNYGIS 158
              R  I      + +A   L    +V + A  SR E +  +       T  ++    + 
Sbjct: 119 SEARAAIAEAQTAQSTAAQQLALYRNVDDPAAVSRSEVIRAEGEANAARTRLQLARARLQ 178

Query: 159 SVYRSLKMKLTRM 171
           S   +     T +
Sbjct: 179 SAQATADSARTEI 191



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 44/156 (28%), Gaps = 29/156 (18%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-------------------- 260
           R +     +    I E +  +         A  + A Y                      
Sbjct: 105 RAIRAQLQQANAQISEARAAIAEAQTAQSTAAQQLALYRNVDDPAAVSRSEVIRAEGEAN 164

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF------SSSNYAQQ 314
                L+  +       +          + T+ +PIAG I+           +       
Sbjct: 165 AARTRLQLARARLQSAQATADSARTEIGRATVRAPIAGEILAVNIRPGEFLSTMGG--GG 222

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           SQP +++   ++  YIR  V  +Q   V  G  A V
Sbjct: 223 SQPFIEMG-QTRPLYIRVDVDEEQAPRVAMGEPAIV 257


>gi|78047786|ref|YP_363961.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325928387|ref|ZP_08189582.1| RND family efflux transporter, MFP subunit [Xanthomonas perforans
           91-118]
 gi|78036216|emb|CAJ23907.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325541263|gb|EGD12810.1| RND family efflux transporter, MFP subunit [Xanthomonas perforans
           91-118]
          Length = 377

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 17/177 (9%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + + +  LR +   Y  A       L     D++Q +    +  ++  +        T+
Sbjct: 114 AVAQSEAQLRKLENSYRRATQLVGQQLVSA-ADVDQLKFDVENSRAQHRLASLELSYTTV 172

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +PI+G I      +  N+ Q + P+ +IV           V  +++  +K G   T+  
Sbjct: 173 QAPISGVIASRSIKT-GNFVQINTPIFRIV-DDSQLEATLNVPERELATLKSGQPVTLLA 230

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                   ++F   +++I P++            + V+      AF      L+ G 
Sbjct: 231 DALP---GQQFVGKVDRIAPVVDSGSGT------FRVV-----CAFGQGAEALQPGM 273



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 4/161 (2%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  +        + +  SG+     VE G ++  G  L+  +       +   +  ++
Sbjct: 65  TGTAALEPRAEAQVV-AKTSGVALSVMVEEGQKVSAGQALVRLDPDRAHLAVAQSEAQLR 123

Query: 105 NLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            L   +    +     L +  DV +  F+    +    L     + + V    IS V  S
Sbjct: 124 KLENSYRRATQLVGQQLVSAADVDQLKFDVENSRAQHRLASLELSYTTV-QAPISGVIAS 182

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +K      I      + +  S L A L+  +++L  +K+
Sbjct: 183 RSIKTGNFVQINTPIFRIVDD-SQLEATLNVPERELATLKS 222


>gi|299739060|ref|XP_001835024.2| nonmuscle myosin heavy chain b [Coprinopsis cinerea okayama7#130]
 gi|298403603|gb|EAU86790.2| nonmuscle myosin heavy chain b [Coprinopsis cinerea okayama7#130]
          Length = 2298

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 71/209 (33%), Gaps = 9/209 (4%)

Query: 87   FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL-------- 138
                   + +  ++V ++  +   + EK A + L      LE      E+QL        
Sbjct: 874  LAATRNDEELRKREVELQLAKERAEREKQAKEALETLKMTLEAEKRRVEDQLEAERALGL 933

Query: 139  -LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
              D L +            I ++   L +  +++      + + E K   L+       +
Sbjct: 934  DKDALLERSKRREAELEEEIGALQTDLDLLDSQLDRALKLQKESEEKHKSLQQAFDQAAE 993

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             L  ++   ++  V +N+L +Q     K   ELR    E + +   +  L  +   + A 
Sbjct: 994  HLVRLEMEQKEWVVRENELLEQIMEAEKEIEELRTGSTELQKVGEELKNLAMQREEDIAR 1053

Query: 258  YLKEISRDLEQNQRTFADEMSKLTILEKT 286
              +     L++ +     E     +L+  
Sbjct: 1054 TKERADVMLQEMEGKLKSETQSRELLKDK 1082



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 78/212 (36%), Gaps = 6/212 (2%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD--FL 142
            +T E    +  I   +  I  L+  ++ E+      +     LE   +   + L      
Sbjct: 1128 VTLEKEAASKEILELQHDIDTLQAQLEAEQQDRATEHGLRTKLEAEIDDLRKVLAAKTDE 1187

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL-LRALLSSHQKDLTM 201
                S   K     I+ +   L      +     + L+ ++K  L L  +   H+  L+ 
Sbjct: 1188 ATRRSEAQKSKEAEITDLRGQLNRLQEELSESRKSSLEAQSKLKLELEVINREHKTLLSS 1247

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             K+L +++  SQ+ L + +  + +     R    E +++   +++   +   E   + + 
Sbjct: 1248 HKSLADRDQASQDQLKKVQANIGELEKNKRAMESELQSLRTKLHDYETQM-SEATRHKEA 1306

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            + R L   Q  + D       L+  R++  ++
Sbjct: 1307 LERQLATAQAKYRDFED--VELQFQRDRDNLV 1336



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 71/218 (32%), Gaps = 13/218 (5%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  E             S K+L       +  L  +      LEK   + E +L     K
Sbjct: 1230 LKLELEVINREHKTLLSSHKSLADRDQASQDQLKKVQANIGELEKNKRAMESELQSLRTK 1289

Query: 145  YHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM- 201
             H   +++        ++ R L     + R      L  +     L   L S ++     
Sbjct: 1290 LHDYETQMSEATRHKEALERQLATAQAKYRDFEDVELQFQRDRDNLVRQLESTKQQFESE 1349

Query: 202  ---MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM---LRHINELYDEANLEF 255
                  L +  A  ++++ + +    K   +L   +   KN    ++ +    D+  +E 
Sbjct: 1350 SLKRTQLEKSLATQKSEVAKLKERNTKLDKDLNTALKTLKNQEWEIKQLESKQDKTIVEH 1409

Query: 256  ANYLKEISR----DLEQNQRTFADEMSKLTILEKTREQ 289
             + L+E  R     L++ Q         +  LEK + +
Sbjct: 1410 VHVLEEAKRVTDRQLQEAQLELDKAKVYIKSLEKVKVR 1447



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 69/220 (31%), Gaps = 19/220 (8%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSA------LDFLNNKYDVLEKAFESREEQLLDFL 142
            D     L   +++     + H    K         D    +  ++E+  ++RE    D  
Sbjct: 1902 DTAAERLKSQQRLQAAEKKLHEMQRKLEEGGKETSDEAALRQHLVEELEDTRERHQKDLA 1961

Query: 143  GKYH--STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             +        K +   ++ +   L+ +   +  +      L ++   L+        +  
Sbjct: 1962 DRDFTIDQTRKKYQAELAQLSEELQSQRDNLSKLREENRKLRSEYDELQLRYDDEVYNSG 2021

Query: 201  MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
              K   E+      DL +       +  E +  I    + +R +  + D+A  + A   K
Sbjct: 2022 GWKKEKERMETKIRDLEKVYEASTGAQAEQQSQIVALHSQVRELRAVLDDAEADRALLQK 2081

Query: 261  EISRDLEQ-----------NQRTFADEMSKLTILEKTREQ 289
                   +           N+ +   E  +L + ++  E+
Sbjct: 2082 ARRALQAELETIKLDGVDPNRMSSDTEFQRLQLRKQDLER 2121



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 69/206 (33%), Gaps = 5/206 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            T   +   ++ +   + +I + +     L  + + L++  E    +            +K
Sbjct: 1420 TDRQLQEAQLELDKAKVYIKSLEKVKVRLAGEAEDLQQEKERELREREKRARMQEEKTTK 1479

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                 +    +S      + R +  +    +++ + L   L + Q+    ++   E+ A 
Sbjct: 1480 AL-AELERERQSKGDLDLQSRRMQADLKAAQSQIAELTEELKATQRSKENLEAELERIAD 1538

Query: 212  ---SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
               S +   + +R       EL + + E +   R I +   E      N ++++     +
Sbjct: 1539 ETDSMDSFARIQRQYESRIAELEQQLSESEGA-RSIADRIKEHLERQHNEIRQLILQSGK 1597

Query: 269  NQRTFADEMSKLTILEKTREQKTILS 294
                F   + K   L      K + +
Sbjct: 1598 GDGDFQTRLLKELQLADEALAKEMSA 1623



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 79/211 (37%), Gaps = 6/211 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD--VLEKAFESREEQLLDFLGKYHST 148
            + ++ +  ++ ++  LR      +S  D L  +YD  V       +E++ ++   +    
Sbjct: 1980 QLSEELQSQRDNLSKLREENRKLRSEYDELQLRYDDEVYNSGGWKKEKERMETKIRDLEK 2039

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFE 207
              +      +     +    +++R +     D E   +LL+    + Q +L  +K +  +
Sbjct: 2040 VYEASTGAQAEQQSQIVALHSQVRELRAVLDDAEADRALLQKARRALQAELETIKLDGVD 2099

Query: 208  KNAVS---QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             N +S   +    Q  +   +  LE +E+            E Y          ++  + 
Sbjct: 2100 PNRMSSDTEFQRLQLRKQDLERLLEAQEDRATSALDRMKKAEAYANDCQIELGKIRVENS 2159

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            +LE+   +   ++ +L +     E ++  SP
Sbjct: 2160 ELERLNASLEKQIKELNVRIVDLETRSYASP 2190


>gi|156935759|ref|YP_001439675.1| p-hydroxybenzoic acid efflux subunit AaeA [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156534013|gb|ABU78839.1| hypothetical protein ESA_03629 [Cronobacter sakazakii ATCC BAA-894]
          Length = 315

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/222 (9%), Positives = 65/222 (29%), Gaps = 22/222 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q    +            +   +E++      N+L  +A       + + +  L+   
Sbjct: 83  IDQPRYQKALEEAEADVAYYQALANEKRREAGRRNQLGVQAMSR--EEIDQANNVLQTVL 140

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A   +   + +   ++  I +P  G +     ++   +  +    + +V  +   Y+
Sbjct: 141 HQLAKAEATRDLAKLDLQRTVIRAPADGWVTNLNVYT-GEFITRGSTAVALVKQNS-FYV 198

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV- 389
           +A +   +++ V+ G+   +                ++ +   ++   +    +    V 
Sbjct: 199 QAYMEETKLEGVRPGFRVEI--TPLGSNN--VLHGTVDSVSAGVTNASSTRDAKGMATVD 254

Query: 390 ----------ILKITDLAFSDNNIELRN-GFPAEVLFTAKNT 420
                      + +  +        L   G  A V       
Sbjct: 255 SNLEWVRLAQRVPV-RIRLDKQPGNLYPAGTTATV-VVTGER 294



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 47/165 (28%), Gaps = 5/165 (3%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
           M     K L      +   + L+ +  I     WS           + +     +VV I 
Sbjct: 1   MSEVDVKLLTTKITRTAITVVLVVLAFIAIFRAWSFYTE----SPWTRDARFSADVVAIA 56

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              +G+I    V +   + +   L T +       ++  +  +   +  +  EK      
Sbjct: 57  PDVAGLITSVDVHDNQLVKKDQVLFTIDQPRYQKALEEAEADVAYYQA-LANEKRREAGR 115

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            N+  V   + E  ++         H          ++ +     
Sbjct: 116 RNQLGVQAMSREEIDQANNVLQTVLHQLAKAEATRDLAKLDLQRT 160


>gi|154492567|ref|ZP_02032193.1| hypothetical protein PARMER_02201 [Parabacteroides merdae ATCC
           43184]
 gi|154087792|gb|EDN86837.1| hypothetical protein PARMER_02201 [Parabacteroides merdae ATCC
           43184]
          Length = 355

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 7/99 (7%)

Query: 39  PIEISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
            I+  VS+S +  +     V   +        SG I+K  VE+G+++ +G  L   +  +
Sbjct: 33  KIDTVVSASSQTALQFPGKVKAAQDISLAFRVSGTIRKIYVEDGARVREGQLLAELDPAD 92

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
               +D  +   K ++   +   +         +  +KA
Sbjct: 93  YRVQLDATEAEYKQIKAEAERVMALYKENGTTPNANDKA 131


>gi|187926599|ref|YP_001892944.1| secretion protein HlyD family protein [Ralstonia pickettii 12J]
 gi|241666110|ref|YP_002984469.1| secretion protein HlyD [Ralstonia pickettii 12D]
 gi|187728353|gb|ACD29517.1| secretion protein HlyD family protein [Ralstonia pickettii 12J]
 gi|240868137|gb|ACS65797.1| secretion protein HlyD family protein [Ralstonia pickettii 12D]
          Length = 361

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 62/187 (33%), Gaps = 13/187 (6%)

Query: 39  PIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           P    + ++G +         + + +  SG + +  V+ G  + +G  L+  ED     L
Sbjct: 41  PYATGIYANGIVESDQPSGANLNLYAEVSGTVARIAVQEGQAVKRGDVLIQIEDSVQRAL 100

Query: 96  IDLKKVSIKNLRCHIDT-----EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
              ++     +   ++       + AL+    +    +    + ++QL            
Sbjct: 101 TAQQQSQADAVDAQLNALLAQPRREALEVTRAQVGAADAGLRTVQDQLDKLEAAARLNPK 160

Query: 151 KVFNYGISSVYRSLKMK----LTRMRSIYLNRLDLEN-KSSLLRALLSSHQKDLTMMKNL 205
            V    + +   ++++     +   R   L R    +     L+    + QK       L
Sbjct: 161 AVSRDAMDNAANAVRVAHGNLVVAQRQYDLTRAGAWSYDIRTLQKQRDALQKGAAAAAAL 220

Query: 206 FEKNAVS 212
            EK AV 
Sbjct: 221 LEKYAVR 227


>gi|47215513|emb|CAG01175.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1504

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 83/224 (37%), Gaps = 6/224 (2%)

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G       D E  D  +  +  + N+ C I  ++  +D L N    L    +  E++L+
Sbjct: 545 AGDETSEDSDSEELDEKEDVQADLANITCEIAIKQKLIDELENSQRRLHTLKQQYEQKLM 604

Query: 140 DFLGKYHSTC--SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
               K   T        + I SV   ++ K  ++R  Y  +L   NK             
Sbjct: 605 MLQNKIRDTQLERDKVLHNIGSVESGMEEKAKKIRVEYERKLSSMNKELQKLQSAQREHA 664

Query: 198 DLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            L   ++ +EK     Q D+ + ++       ++RE   + +N         + A+L+  
Sbjct: 665 RLLKNQSQYEKQLKKLQMDVTEMKKTKVTLMRQMREQ--QDRNRAAECRRNREIASLKKD 722

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
               E      + Q+   + M +    E T  ++ +  P++GT+
Sbjct: 723 QRRAEYQLKQMEAQKRQQELMLRRKNEEVTALRRQVR-PVSGTV 765


>gi|324112165|gb|EGC06143.1| efflux pump membrane protein [Escherichia fergusonii B253]
          Length = 343

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 93/259 (35%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       ++
Sbjct: 61  ELAVKDNQLVKQGDLLFRIDPRPYEASLAKAQASLTALDKQIMLTQRSVEAQQFGAAAVK 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                  A++    K     ++L  +  VS  D+++       + ++    + + ++ + 
Sbjct: 121 TSVEKALAIVHQTSKTFQRTESLLAEGYVSDEDVDRARTAHRSAQVDYAALLLQAQSAVS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +                 +   + Q +   AD    + + +   E  T+ +P  G +V 
Sbjct: 181 GVGG---------------VDALVAQREAVLAD----IALTKLHLEMATVRAPFDGRVVS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A     ++ +++ G  ATVR         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETELNNIRAGTPATVRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  +
Sbjct: 277 FEGKVDSIGYGVLPDDGGM 295



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 45/135 (33%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + V++    SG I +  V++   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTVDVVPEVSGRIVELAVKDNQLVKQGDLLFRIDPRPYEASLAKAQASLTALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + +++        ++ + E     +      +  T S +    +S           R 
Sbjct: 104 LTQRSVEAQQFGAAAVKTSVEKALAIVHQTSKTFQRTESLLAEGYVSDEDVDRARTAHRS 163

Query: 172 RSIYLNRLDLENKSS 186
             +    L L+ +S+
Sbjct: 164 AQVDYAALLLQAQSA 178


>gi|229588504|ref|YP_002870623.1| hypothetical protein PFLU0961 [Pseudomonas fluorescens SBW25]
 gi|229360370|emb|CAY47227.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 388

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 58/158 (36%), Gaps = 4/158 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS  G +L   + V I+    GI+ +  V+ G ++  G  L + +D      +D  K  +
Sbjct: 54  VSGIGTVL-SLHSVVIRPQVDGILTQLLVKEGQRVKAGDLLASIDDRSIRASLDQAKAQL 112

Query: 104 KNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +  +      L     L+    V ++ ++ ++  +           + + +  +   
Sbjct: 113 GESQAQLQVALVNLKRYKALSVDDGVSKQTYDQQQALVNQLKATVQGNQAAIDSAQVQLS 172

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           Y  ++  ++    I         ++S  + L S  Q D
Sbjct: 173 YTQIRSPVSGRVGIRTVDEGNFLRTSDTQGLFSVTQID 210


>gi|209769514|gb|ACI83069.1| putative membrane protein [Escherichia coli]
          Length = 299

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 70/220 (31%), Gaps = 27/220 (12%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S +     +  +   +   +S    +L +     +   V+  DL            EL
Sbjct: 44  MQSPWTRDGKIRAEQVSITPQVSGRIVELNIK----DNQLVNAGDLLLTIDKTPFQIAEL 99

Query: 231 RENIHEQKNMLRHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTI 282
                +       + +  +EAN           A  L   + +++  Q +     + L  
Sbjct: 100 NAQ-AQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQ 158

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQ 338
            +    Q  I +P++G +    +    +YA   +PL  +V       I      K+    
Sbjct: 159 TQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR--- 214

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             H+++G  A +          K  +  +  I   I  Q 
Sbjct: 215 --HIREGAPAQITL----YSDNKTLQGHVSSIGRAIYDQS 248



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 15  MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 70

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 71  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 130

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 131 SAEELDTANLNVKAMQASVDAAQATLKQTQWQLAQTEIRA 170


>gi|225872998|ref|YP_002754457.1| efflux transporter, RND family, MFP subunit [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791618|gb|ACO31708.1| efflux transporter, RND family, MFP subunit [Acidobacterium
           capsulatum ATCC 51196]
          Length = 457

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/244 (11%), Positives = 64/244 (26%), Gaps = 39/244 (15%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +A L+    +    + L++   +S+ D    +   +     L +            
Sbjct: 125 IEHAQAQLTQAGSEYKRAQALYKAQVMSRQDFETDKATYFADVASLAQAKAGLTQNKAQT 184

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                +   + A                       L   +    +   ++P  G +    
Sbjct: 185 AAAEAQLRTQQAT----------------------LKSNQDQLNKTLAIAPFDGIVTNLP 222

Query: 305 SFSSSNYAQ-----QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA--- 356
                   +     +   LM I  +         V    I +V  G  A V         
Sbjct: 223 VRKGETVVEGIQNAEGSTLMTIA-NMSTVTAEVMVDEDDIINVAIGQPAQVTVDALPGES 281

Query: 357 ---DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
               + E   +A++       SQ  +  Q  + ++V++ +        N +L+ G     
Sbjct: 282 FAGHVTEVGDQALLRSTGVSTSQSTSGTQEAKDFKVVITLDHP-----NKDLKPGLSCTA 336

Query: 414 LFTA 417
             T 
Sbjct: 337 KITT 340



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 72/213 (33%), Gaps = 7/213 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +VS++G+I  ++ V  + +   G I    V+ G ++  G  + T ++++ T  +  +
Sbjct: 42  LTSTVSATGQIKPKEYV-NLGATAFGPITNLYVKEGERVHAGEVVATIDNVQQTAAVAGQ 100

Query: 100 KVSIKNLRCHIDTEKSALDFLN-----NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           K +I   +  +  + +A           +  + +   E +  Q L           +   
Sbjct: 101 KAAIAAAQRTVAADLAAQATAQANIEHAQAQLTQAGSEYKRAQALYKAQVMSRQDFETDK 160

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQ 213
               +   SL      +          E +    +A L S+Q  L     +      V+ 
Sbjct: 161 ATYFADVASLAQAKAGLTQNKAQTAAAEAQLRTQQATLKSNQDQLNKTLAIAPFDGIVTN 220

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             + + E +V          +    NM     E
Sbjct: 221 LPVRKGETVVEGIQNAEGSTLMTIANMSTVTAE 253


>gi|157150477|ref|YP_001450700.1| ATP-binding cassette transporter-like protein [Streptococcus
           gordonii str. Challis substr. CH1]
 gi|157075271|gb|ABV09954.1| ATP-binding cassette transporter-like protein [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 417

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 102/295 (34%), Gaps = 31/295 (10%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL--------LTFEDIETTDLIDL 98
           SGE+   ++      P  G +K+  V+NG  + QG PL        LT +  +       
Sbjct: 65  SGEVAPNNSSKVKIDPSKGEVKEVFVKNGDTVTQGQPLFSYVTSQELTAQSAQYDAQAKS 124

Query: 99  KKVSIKNLRCHIDTE-----KSALDFLNNKY-----DVLEKAFESREEQLLDFLGKYHST 148
             +S       I  E      + L+ L  KY     + L    +S E+++   L   +S 
Sbjct: 125 NSISTAQSNASIKWETYNRKLANLNSLREKYNANNDESLLDQIKSAEDEVAQSLSDANSA 184

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-----LENKSSLLRALLSSHQKDLTMMK 203
            ++V N  I +       +    R  Y          + + +  L     + +++   ++
Sbjct: 185 DNEVKNAQIEAEKAQATAQTESDRMKYDTVTADTAGTITSMNEDLPTQSKAKKEEENFIE 244

Query: 204 NLFE-----KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            + +     K  VS+ D  + +       ++ +    +    +  +  L  +A       
Sbjct: 245 IMDKSKTFVKGNVSEFDREKLQVGQKVEVVDRKNPKKKWTGTVTQVGTLTADAAANGNKQ 304

Query: 259 LKEISRDLEQNQRTFADEMSKLT-ILEKTREQKTILSPIAGTIVYNQ--SFSSSN 310
            +E     +   +   D+   +  I   T       +P AG +V N+   F+ + 
Sbjct: 305 QQENPNQAKYPYKVELDQAENMPLIGSHTYVNVLENAPEAGKVVVNKSYVFTENG 359



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 62/171 (36%), Gaps = 20/171 (11%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +++L  I    DE     ++       +++  Q       +         +  T+ +  A
Sbjct: 161 ESLLDQIKSAEDEVAQSLSDANS-ADNEVKNAQIEAEKAQATAQTESDRMKYDTVTADTA 219

Query: 298 GTIVYNQ--SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           GTI        + S   ++ +  ++I+     T+++  V+    + ++ G    V     
Sbjct: 220 GTITSMNEDLPTQSKAKKEEENFIEIM-DKSKTFVKGNVSEFDREKLQVGQKVEV----- 273

Query: 356 ADIREK--KFKAIIEKIDPIIS---------QQDNNLQTQEYYEVILKITD 395
            D +    K+   + ++  + +         QQ+N  Q +  Y+V L   +
Sbjct: 274 VDRKNPKKKWTGTVTQVGTLTADAAANGNKQQQENPNQAKYPYKVELDQAE 324


>gi|121704662|ref|XP_001270594.1| anucleate primary sterigmata (ApsB), putative [Aspergillus clavatus
            NRRL 1]
 gi|119398740|gb|EAW09168.1| anucleate primary sterigmata (ApsB), putative [Aspergillus clavatus
            NRRL 1]
          Length = 1674

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 75/219 (34%), Gaps = 20/219 (9%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-KSALDFLNN-------KYDVLEKAFESREEQLLDFL 142
            +       +   ++     ++ E +  LD ++        +   LE+   S++E L    
Sbjct: 963  QVRQEAAERVAHLEAEYAQLEAEAQEELDMMDETVRQKTEECQQLEEELRSQDENLRALQ 1022

Query: 143  GKYHSTCSKVFN---------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             +  S    +               +V R L+     M ++  N  +   K   L   + 
Sbjct: 1023 AEMRSASEGIIRLEEDAQNNLQRYEAVQRELENCNQEMETLEKNLYEANTKVQRLTVQIE 1082

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
            S Q ++  ++   E+    +  +   E  +    L L+    + + +   + E   +  +
Sbjct: 1083 SSQNEIAFLR---EEQEGDKIRIGDLESELKTYLLSLQSERDKTRELEARLAEERHQREV 1139

Query: 254  EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +   +E+ R + +  R  +    +   L+K+   + I
Sbjct: 1140 VGSQEKQEVQRIVNELNREASMAKEEARKLKKSLSAQEI 1178



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 24/245 (9%), Positives = 71/245 (28%), Gaps = 37/245 (15%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            + G +I  G   L  E       +  ++   + L   +  E+   + + ++     +   
Sbjct: 1095 QEGDKIRIGD--LESELKTYLLSLQSERDKTRELEARLAEERHQREVVGSQEKQEVQRIV 1152

Query: 133  SREEQLLDFLGKYHSTCSKVFNYGI--------------SSVYRSLKMKLTRMRSIYLNR 178
            +   +      +      K  +                 +++  +L        S+  N 
Sbjct: 1153 NELNREASMAKEEARKLKKSLSAQEIETATWRERLMDLENNLRETLGDLTGSRSSLISNI 1212

Query: 179  LDLENKSSLLRALLSSHQKDLTMMKNLFEK--------NAVSQ--NDLNQQERIVYKSTL 228
            + L+ +       L S +  L   ++L              S+   +L ++ER   ++  
Sbjct: 1213 MKLQKELESTALELESVRSKLDETESLLRNRDALLESHGLESRKLAELLERERQARRADK 1272

Query: 229  -----------ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                       +    I +  + +  +    ++    F +  ++    L +         
Sbjct: 1273 QSFEQALKSHHQASRTITQSNSRITELENARNQDRKRFTSVEQQFREQLNERNSMLLTMW 1332

Query: 278  SKLTI 282
             +L+ 
Sbjct: 1333 KRLSA 1337



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 67/221 (30%), Gaps = 9/221 (4%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
            LL  E+ E    +  +   + +    +  +  E   L     +      A +S  ++   
Sbjct: 818  LLRQENAELRREVSAQTSMLTSRNKEKERLYQEIEELKLGQRRDGGRSVAGDSIFDRSAS 877

Query: 141  FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                   +        +   +   +    R+  +      L+ ++  L+A +    K+  
Sbjct: 878  RAHGRSPSRVSDGTGPLRGDHAEREDLELRIGELRDQVSALKLENQTLKAQMEERGKEYE 937

Query: 201  MMKNLFEKNAVSQNDLNQQERIV-YKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +   +++ A    +  Q  R    +   E  E +   +     +     E        +
Sbjct: 938  ALDTQYQEEADQLEEWLQAARQECDQVRQEAAERVAHLEAEYAQLEAEAQEELDMMDETV 997

Query: 260  KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            ++ + + +Q +     +   L  L     Q  + S   G I
Sbjct: 998  RQKTEECQQLEEELRSQDENLRAL-----QAEMRSASEGII 1033


>gi|327273716|ref|XP_003221626.1| PREDICTED: uncharacterized protein KIAA1211-like [Anolis
           carolinensis]
          Length = 1596

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/227 (8%), Positives = 68/227 (29%), Gaps = 18/227 (7%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G Q+ +              +    ++           E+S         +   +  E
Sbjct: 285 KEGQQVGK---------THKELMAQEHEMQWHQEEERKMEERSQELEEPMHSESEHQELE 335

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS---LLR 189
            +++  ++   ++                +       + +     + DLE +       +
Sbjct: 336 DQKQSEVETQKRHEEQRKHERKAQKQRKDQKQCEMEAQSQQEEQRKCDLEAQKQWEEQRQ 395

Query: 190 ALLSSHQKDLTMMKNL---FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             + + +K     + L    ++    Q +L  Q+    +  LE +    E++       +
Sbjct: 396 NEMEAQRKQEERQRELKAQRKREKERQRELEAQQEEQRRYELEAQRKQEEERRRKMEAQK 455

Query: 247 LYDEANLEFANYLKEISRDLE---QNQRTFADEMSKLTILEKTREQK 290
            ++E         ++     +   + QR   ++       ++ +E++
Sbjct: 456 KWEEQRQHEMEAQRKQEEQRQYKMEAQRKQEEQRQYEMEAQRKQEEQ 502



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/197 (9%), Positives = 58/197 (29%), Gaps = 10/197 (5%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL----LDFLGKYH 146
           E     + ++  +K  R      +  L+    +    E   + ++E+     ++   K+ 
Sbjct: 399 EAQRKQEERQRELKAQRKREKERQRELEAQQEEQRRYELEAQRKQEEERRRKMEAQKKWE 458

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL----SSHQKDLTMM 202
                          +       + +     + ++E +            S  +++    
Sbjct: 459 EQRQHEMEAQRKQEEQRQYKMEAQRKQEEQRQYEMEAQRKQEEQRQYEMESQRKQEEQRQ 518

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + L  +  + Q +  + E        E R+   E +   +   +   EA  +     ++ 
Sbjct: 519 RELEAQ--MQQEEQRKCELEAQMQQEEQRQRELETQRQHKEQRQCKMEAERQHELEAQKD 576

Query: 263 SRDLEQNQRTFADEMSK 279
                Q+Q     +  +
Sbjct: 577 QEKQYQHQLEAQKQSEE 593


>gi|242211284|ref|XP_002471481.1| predicted protein [Postia placenta Mad-698-R]
 gi|220729437|gb|EED83311.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1807

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 59/195 (30%), Gaps = 8/195 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                 +      +K+ R  +D+E++     + +        E     +           
Sbjct: 385 TARQAEVYGTLEVLKSTRARLDSERAKARKEHEQRAKERAQVEQARAAIATKRMNAEEGR 444

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN---LF 206
            +     + ++     ++           L    ++      L + Q+ +  M+    L 
Sbjct: 445 LEDTRKRVQAIVERTVLEEQNEMLEKERVLREAARTRTEEEHLEAEQRRVEAMEEQIRLE 504

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR---HINELYDEANLEFANYLKEIS 263
           E+  + + +L + E    +   E    + EQ+ +      I      A LE      E  
Sbjct: 505 EQREMREKELARIE--TGRMQAEEERLVAEQRRIQATTEQIALEQQRAILEKEQIRLEAE 562

Query: 264 RDLEQNQRTFADEMS 278
           R  ++ +R    E+ 
Sbjct: 563 RVRQEAERRRDQEVQ 577



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/229 (10%), Positives = 72/229 (31%), Gaps = 31/229 (13%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ED        +++  ++     ++ E+   +    + +      E R  + ++   + 
Sbjct: 444 RLEDTRKRVQAIVERTVLEEQNEMLEKERVLREAARTRTEEEHLEAEQRRVEAMEEQIRL 503

Query: 146 HSTC-------SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                      +++    + +    L  +  R+      ++ LE + ++L       + +
Sbjct: 504 EEQREMREKELARIETGRMQAEEERLVAEQRRI-QATTEQIALEQQRAILEK--EQIRLE 560

Query: 199 LTMMKNLFEKNAVSQNDLN----QQERIVYKSTLELRENIHE-----------------Q 237
              ++   E+    +  +      Q+R V K    LR+N  +                 +
Sbjct: 561 AERVRQEAERRRDQEVQVGPARHLQDREVQKDEPALRDNEAQTLYVEWKDAQTGRGSLCE 620

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             M     E   +  ++F     ++    E + R    ++ +    ++ 
Sbjct: 621 GGMQTDCTEGVRDQEVQFGPADYQVQTARENDLRHQEAQIERDMQAQQE 669


>gi|189348011|ref|YP_001941207.1| putative multidrug resistance efflux pump [Burkholderia multivorans
           ATCC 17616]
 gi|189338149|dbj|BAG47217.1| putative multidrug resistance efflux pump [Burkholderia multivorans
           ATCC 17616]
          Length = 321

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 74/223 (33%), Gaps = 27/223 (12%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + +      ER+   +  + R  + + K       +L    NL  +  ++E    +EQ 
Sbjct: 77  VIDRARYALAERLAEATLAQRRATLAQAKREYARNLQLG---NLVASEQVEESRTRVEQG 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +    D    L   +   ++ T++SP+ G  + +++     Y    + ++ +V       
Sbjct: 134 EAAVQDAQVSLDTAKLNLQRTTVVSPVDGY-LNDRAPRVGEYVPAGRAVLSVV-DRNSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----- 384
           +       +++ +  G    +    +        +  ++ I   I  +D    +      
Sbjct: 192 VDGYFEETKLRGIHIGQPVDI----FVMGEPHSLRGHVQSIVAAIEDRDRTQGSNLLPNV 247

Query: 385 ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                     +   V + + ++    ++  +  G  A V   A
Sbjct: 248 NPAFSWVRLAQRVPVRVALDEV---PDDFRMIAGRTATVAVRA 287



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 6/118 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++    SG+I   +V +   + +G  L   +         L + ++   R  + 
Sbjct: 43  VRADVIQVAPDVSGLITSVEVADNQAVTRGQVLFVIDRARYALAERLAEATLAQRRATLA 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             K            L+       EQ+ +   +     + V +  +S     L ++ T
Sbjct: 103 QAKREYAR------NLQLGNLVASEQVEESRTRVEQGEAAVQDAQVSLDTAKLNLQRT 154


>gi|94495979|ref|ZP_01302558.1| HlyD family secretion protein [Sphingomonas sp. SKA58]
 gi|94424671|gb|EAT09693.1| HlyD family secretion protein [Sphingomonas sp. SKA58]
          Length = 420

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 67/195 (34%), Gaps = 10/195 (5%)

Query: 38  LPIEISVSS----SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
            P++ +V+      G        V+I+   SG +     ++G  + +G  L T +     
Sbjct: 66  APLQRAVTQWDEYVGRFAPS-QTVDIRPRVSGAVTAIHFQDGDYVRKGQLLFTIDQRPFR 124

Query: 94  DLIDLKKVSIKNLRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             +   + S+ + R  +   K   + +  L     V     +S   +L     +     +
Sbjct: 125 AALAEARASVASARSALLLAKNDYARVQRLTGDEAVSASEVDSLRSRLQAAQAELAGAQA 184

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +  +  +   +  ++  ++    +   R+D+ N  S      ++    +  +  ++    
Sbjct: 185 RERSRALDVEFTQVRAPISGR--VSDRRVDIGNLVSGAEGNGATLLTTVNKLDPIYFNFD 242

Query: 211 VSQNDLNQQERIVYK 225
            S+    + +R    
Sbjct: 243 ASEALYLKSQRDQAD 257



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 33/104 (31%), Gaps = 8/104 (7%)

Query: 210 AVSQNDLN--QQERIVYKSTLELRENIHEQKNMLRHINELYDEAN------LEFANYLKE 261
            V +  L     +R    +  E R ++   ++ L      Y             A+ +  
Sbjct: 108 YVRKGQLLFTIDQRPFRAALAEARASVASARSALLLAKNDYARVQRLTGDEAVSASEVDS 167

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +   L+  Q   A   ++        E   + +PI+G +   + 
Sbjct: 168 LRSRLQAAQAELAGAQARERSRALDVEFTQVRAPISGRVSDRRV 211


>gi|27378965|ref|NP_770494.1| hypothetical protein blr3854 [Bradyrhizobium japonicum USDA 110]
 gi|27352115|dbj|BAC49119.1| blr3853 [Bradyrhizobium japonicum USDA 110]
          Length = 288

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 54/172 (31%), Gaps = 8/172 (4%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + +       R    S    +  + +    L+  N L  +A  +     +++     Q +
Sbjct: 78  IDRERFALALRQAEASVAGHQATLDQANADLKRYNALTTDAVSQ--QKQEQVLATQLQAK 135

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
             F   ++   + +   ++  + + + G I          Y    + +M +V  +   ++
Sbjct: 136 AAFDQAVADRALAQLNLDRSEVHASVNGVITNMDLR-PGAYVTAGKGVMALV-DTDTLHV 193

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  ++  ++ G    VR        +      +E I   I  +D    
Sbjct: 194 EGYFEETKLARIRTGDKVRVRL----MGEKVTLSGRVESIAAGIEDRDRAEG 241



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/252 (10%), Positives = 80/252 (31%), Gaps = 7/252 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV++    SG + +  V++  ++ +G  L   +       +   + S+   +  +D
Sbjct: 43  VRADVVQVAPDVSGFVTEVLVKDNQKVRRGDVLFRIDRERFALALRQAEASVAGHQATLD 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++  D         +   + ++EQ+L    +  +   +       +     + ++   
Sbjct: 103 --QANADLKRYNALTTDAVSQQKQEQVLATQLQAKAAFDQAVADRALAQLNLDRSEVHAS 160

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +  +  +DL   + +           L     L  +    +  L +           + 
Sbjct: 161 VNGVITNMDLRPGAYVTAGKGVMA---LVDTDTLHVEGYFEETKLARIRTGDKVRVRLMG 217

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E +     +      + D    E A+ L  ++          A  +     L+   E  +
Sbjct: 218 EKVTLSGRVESIAAGIEDRDRAEGASMLANVNPTFS--WVRLAQRVPVRIALDPVPENMS 275

Query: 292 ILSPIAGTIVYN 303
           +++  + T+   
Sbjct: 276 LVAGRSATVEVL 287


>gi|260061010|ref|YP_003194090.1| cation efflux system protein [Robiginitalea biformata HTCC2501]
 gi|88785142|gb|EAR16311.1| cation efflux system protein [Robiginitalea biformata HTCC2501]
          Length = 391

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 26/207 (12%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            + +  LE RE +  +K   R    LY E      +YL +   D +          S+L 
Sbjct: 108 QLQQDYLETREQLPYKKAEYRRQKTLYGEKISSEKSYL-QAESDYKTALARLGGLGSQLK 166

Query: 282 ILEKT---------REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           +L            R +  + +PIAG++          +  Q+  +++IV      ++  
Sbjct: 167 LLNFDPETLEPGNLRAESQVYAPIAGSVTQVNVI-KGAFVSQATEIVEIV-DDDHIHLEL 224

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  K I  ++ G    +RF    +   +++ A +  I   I                +K
Sbjct: 225 TVYEKDIGKLRIGQP--IRFS-LPEQSGQQYNAEVYLIGTSIGPDR-----------TVK 270

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +           L  G          +
Sbjct: 271 VHAHLAEATGANLLVGMFVRAQIELGD 297



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 51/167 (30%), Gaps = 6/167 (3%)

Query: 37  LLPIEISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
              I      SG I +  +N   + +   G +K   +  G ++ +G  +   E+ E    
Sbjct: 53  FAEILEV---SGTIDVPPENRAVVSAVRGGFVKSISLLVGDRVRKGQRIAALENPEFL-Q 108

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +    +  +    +   E      L  +    EK++   E      L +     S++   
Sbjct: 109 LQQDYLETREQLPYKKAEYRRQKTLYGEKISSEKSYLQAESDYKTALARLGGLGSQLKLL 168

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                       L     +Y        + ++++    S   ++  +
Sbjct: 169 NFDPETLE-PGNLRAESQVYAPIAGSVTQVNVIKGAFVSQATEIVEI 214


>gi|323138840|ref|ZP_08073903.1| efflux transporter, RND family, MFP subunit [Methylocystis sp. ATCC
           49242]
 gi|322395882|gb|EFX98420.1| efflux transporter, RND family, MFP subunit [Methylocystis sp. ATCC
           49242]
          Length = 419

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 66/179 (36%), Gaps = 30/179 (16%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTIL-------EKTREQK-------TILSPI 296
           A  EF   L+       + QRT  +   +   L           E+         + SPI
Sbjct: 138 AQREFLAALQYSRSSPSEAQRTVVETTRQRLALWDVPKSTIDELERTGKPSKSLILRSPI 197

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GTI+  ++F    Y      L   V      +++AK+   ++ HV  G  A V FP  A
Sbjct: 198 TGTILEKKAF-QGQYVMPQAELYN-VADLSTVWVQAKIFAYELPHVVLGMPAKVTFPSLA 255

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +     F   +  I+P++ +            V ++I     ++ +  ++ G  A VL 
Sbjct: 256 NR---PFDGKVVFIEPVVEEAART--------VQVRI---ELNNPDGVIKPGMFANVLI 300


>gi|237747532|ref|ZP_04578012.1| macrolide-specific efflux protein MacA [Oxalobacter formigenes
           OXCC13]
 gi|229378894|gb|EEO28985.1| macrolide-specific efflux protein MacA [Oxalobacter formigenes
           OXCC13]
          Length = 405

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 72/177 (40%), Gaps = 20/177 (11%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITW--------------SILLPIEISVSSSGEILNEDN 55
           K  +P     ++ + +I I  L  W              + +  I   V ++GE+    N
Sbjct: 7   KLKNPKVWIPVSAIIVIVIAALTYWLATSEDDITYMTEKARVGNISQVVEATGEV-AAVN 65

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
           +V + +  SG IKK  V  G ++ QG  +   +     + ++  +  + N +  ++  K 
Sbjct: 66  LVNVGAQVSGQIKKLYVVLGQEVKQGDMIAEIDSQTQENTLNTDRAKLANYKAQLEARKI 125

Query: 116 ALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            L+    +YD   VL K   + ++ L +    Y +  + V    + S+ +  ++ + 
Sbjct: 126 LLNIAKKQYDRELVLIKTNSTSQQNLENARDTYATARANV--NEMESLIKQTQITIN 180



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 55/207 (26%), Gaps = 23/207 (11%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + +    K  L + +  ++++ +L   N    +      +       ++ + +       
Sbjct: 117 KAQLEARKILLNIAKKQYDRELVLIKTNSTSQQNLENARDTYATARANVNEMESLIKQTQ 176

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKV 334
             +   E       I +P+ GTIV             +Q    +++I        I  ++
Sbjct: 177 ITINTDETNLGYTKIRAPLNGTIVSVPV-EEGQTVNANQTTPTIVQIANLGD-MEIDIQI 234

Query: 335 TPKQIQHVKKGYTAT------------VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           +   I  VK G                 +                 K     S    +  
Sbjct: 235 SEGDITKVKPGMPVDYTILSEPNTIFHAKLDSIDPGLTTLTDGSYSKSSTSSSSSSTSTA 294

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGF 409
              YY            ++  +LR G 
Sbjct: 295 AVYYY------GRSYVKNDEGKLRIGM 315


>gi|167573108|ref|ZP_02365982.1| multidrug resistance secretion protein [Burkholderia oklahomensis
           C6786]
          Length = 462

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 53/161 (32%), Gaps = 12/161 (7%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           +   +     ++  +  +  ++ TI+SP+ GT+   +S           PLM +V   + 
Sbjct: 265 EQNPSVQQAAAQYKLAYRNLKRTTIVSPVDGTV-GQRSVQIGQQVGPGVPLMSVV-QLRQ 322

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDN 379
            ++ A     QI+H++ G    +    Y       +   +E            + SQ   
Sbjct: 323 VWVEANFKEGQIRHMRVGQPVRLESDLYGSRVT--YHGRVEGFSAGTGSAFSMLPSQNAA 380

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               +    V + I+  A       LR G         K  
Sbjct: 381 GNWIKVVQRVPVVISLEASELTAHPLRVGLSMRATVETKAR 421



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 53/175 (30%), Gaps = 2/175 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N+V+I +   G +   +V +  Q+  G  L   +D + +   +  +  +      + 
Sbjct: 129 VAGNIVQIAAQIQGTVTDIRVTDTQQVKAGQVLAKLDDADASATFEQAQAQLAQAVRQVA 188

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--KVFNYGISSVYRSLKMKLT 169
             + ++          E   +  ++      G      +  ++     +       +   
Sbjct: 189 NTRISMGMYEETVKAREADLKLAQQAYRARAGASVEVVAPEELVRAKSNLANAQAALASA 248

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           R +      L  E       ++  +  +     +NL     VS  D    +R V 
Sbjct: 249 RAQRDAARALGSERPVEQNPSVQQAAAQYKLAYRNLKRTTIVSPVDGTVGQRSVQ 303


>gi|305666710|ref|YP_003862997.1| cation efflux system protein [Maribacter sp. HTCC2170]
 gi|88708934|gb|EAR01168.1| cation efflux system protein [Maribacter sp. HTCC2170]
          Length = 402

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 73/207 (35%), Gaps = 25/207 (12%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            + +  LE  + +   K+       L +E      N+LK    D +     +     KL 
Sbjct: 139 EIQQEYLESAQKLKYLKSEYNRQKTLVEEQISSQKNFLK-AESDYKSTLAIYNGLKKKLQ 197

Query: 282 ILEKTREQK---------TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           +L    +           T+ +PI G+I      S   +   +  +M+I+ ++   ++  
Sbjct: 198 MLNINIQNVEAGKMSSIITLYAPIHGSITRLNV-SKGTFVSPADEIMEII-NTDHVHVEL 255

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V  K I  VK+G     + P   +  E+ ++A +  +   I  ++            +K
Sbjct: 256 SVFEKDILKVKEGQRIMFKVP---EAVEQTYEAEVHLVGTSIDPKNRT----------VK 302

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +     +D N     G   +     ++
Sbjct: 303 VHGHLANDENNNFAVGMFVDAQIITES 329



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 2/118 (1%)

Query: 42  ISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
             V ++G I +   N   I S   G +K   +  G ++ +G  L T E+ E  ++     
Sbjct: 86  KIVQTTGMIDVPPSNKAIISSFAGGYVKNSNLLIGDKVKKGQVLATLENPEFVEIQQEYL 145

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            S + L+ ++ +E +    L  +    +K F   E      L  Y+    K+    I+
Sbjct: 146 ESAQKLK-YLKSEYNRQKTLVEEQISSQKNFLKAESDYKSTLAIYNGLKKKLQMLNIN 202


>gi|293611012|ref|ZP_06693311.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826664|gb|EFF85030.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 372

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 80/213 (37%), Gaps = 13/213 (6%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           R       +  +   ++ + A +    +   ++  L  ++ V++    +      +S  E
Sbjct: 68  RAVQQSSIQAQVSATATNVTANVGQQVQKGQVLVRLNNQDNVARLAQARANLASAQSQAE 127

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L  N+  +K  L +   +   A +EF     +    LE  +   A+    + I +K  + 
Sbjct: 128 LARNLMNRKQRLFNQGFI---ARVEFEQSQVDYKGQLESVKAQQAN----VDIAKKADQD 180

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I SPI+G I   Q           Q L +IV +     I+AK+  +Q   +K G    
Sbjct: 181 GIITSPISGVITKRQV-EPGQTVSVGQTLFEIV-NPDQLEIQAKLPIEQQSALKIGSNIQ 238

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
            +         K+  A + +I P+  Q    ++
Sbjct: 239 YQI----QGNSKQLNATLTRISPVADQDSRQIE 267



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 24/221 (10%), Positives = 80/221 (36%), Gaps = 14/221 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++   + +G I        I++  S          G Q+ +G  L+   + +    +   
Sbjct: 57  LDSQTAFTGTIRAVQQS-SIQAQVSATATNVTANVGQQVQKGQVLVRLNNQDNVARLAQA 115

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++ + +   +  ++ ++     ++    A    E+  +D+ G+  S  ++  N  I+ 
Sbjct: 116 RANLASAQSQAELARNLMNRKQRLFNQGFIARVEFEQSQVDYKGQLESVKAQQANVDIAK 175

Query: 160 VYRSLKMKLTRMRSIYLNRL----DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                 +  + +  +   R        +    L  +++  Q ++     + +++A+    
Sbjct: 176 KADQDGIITSPISGVITKRQVEPGQTVSVGQTLFEIVNPDQLEIQAKLPIEQQSAL---- 231

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                +I      +++ N  +    L  I+ + D+ + +  
Sbjct: 232 -----KIGSNIQYQIQGNSKQLNATLTRISPVADQDSRQIE 267


>gi|284037701|ref|YP_003387631.1| efflux transporter RND family, MFP subunit [Spirosoma linguale DSM
           74]
 gi|283816994|gb|ADB38832.1| efflux transporter, RND family, MFP subunit [Spirosoma linguale DSM
           74]
          Length = 349

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 16/144 (11%)

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           LE+ Q +     +++  L+K     T+ +P +G +         +      P+ KI    
Sbjct: 139 LERTQLSIRSTQAQIKQLQKQLANTTVTTPFSGIVTDKMV-EKGSVVSVGSPIAKIT-DI 196

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               +  +V  K I   + G +  +    Y D R       + +I  I +Q D       
Sbjct: 197 STLKLVVQVPEKAINQFRVGQSLPITTEVYPDARF------VGRISMIAAQGDAAHN--- 247

Query: 386 YYEVILKITDLAFSDNNIELRNGF 409
            Y + + + +   +     LR G 
Sbjct: 248 -YPIEITVPNSGKNQ----LRAGM 266



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 40/117 (34%), Gaps = 4/117 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + L  +       G       + EI+    G I    +E G  +  G  +   +D +   
Sbjct: 48  ASLQNLSQETEFLGSFSPNREI-EIRPQAGGQIVSLPIEEGQTVGAGRLIAKLDDEQLRY 106

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK---AFESREEQLLDFLGKYHST 148
            I+   V+++  +  +   +  +         LE+   +  S + Q+     +  +T
Sbjct: 107 QIEGLMVTLEGYQNDLKRYEVLVKGDATPAINLERTQLSIRSTQAQIKQLQKQLANT 163


>gi|288937376|ref|YP_003441435.1| secretion protein HlyD [Klebsiella variicola At-22]
 gi|288892085|gb|ADC60403.1| secretion protein HlyD family protein [Klebsiella variicola At-22]
          Length = 355

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 7/207 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
                  L+ ++ ++    W +L P    +   SS+G I   +  V+I S  +G I    
Sbjct: 5   KKRWAGYLVGLLVVLAAAAWWLLHPPGLPDGFASSNGRIEATE--VDIASKIAGRIDTIL 62

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + QG  L   +     +        IK     +   ++ LD   ++    E   
Sbjct: 63  VKEGQFVRQGEVLARMDTRVLNEQRLEAAAQIKEAESAVLAARALLDQRQSEMRASEAVV 122

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           + R+ +L     ++    S   +   +   + L        S        + + S  RA 
Sbjct: 123 KQRQAELDSSAKRH--VRSNALSQRGAVSAQQLDDDRAAAESARAALESAKAQVSAARAA 180

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           + + +  +   +   E    ++  +  
Sbjct: 181 IEAARTSIIQAQTRVEAAQATERRILA 207


>gi|215489432|ref|YP_002331863.1| multidrug resistance protein MdtN [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312965698|ref|ZP_07779927.1| multidrug resistance protein mdtN [Escherichia coli 2362-75]
 gi|215267504|emb|CAS11958.1| predicted membrane fusion protein of efflux pump [Escherichia coli
           O127:H6 str. E2348/69]
 gi|312289672|gb|EFR17563.1| multidrug resistance protein mdtN [Escherichia coli 2362-75]
          Length = 343

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 88/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L  +  VS  ++++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A     ++++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETELKNIRSGTPATIRLMS---NSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 42/136 (30%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSSL 187
               LN + L+ +S+ 
Sbjct: 164 AEADLNAVLLQAQSAA 179


>gi|212704171|ref|ZP_03312299.1| hypothetical protein DESPIG_02226 [Desulfovibrio piger ATCC 29098]
 gi|212672375|gb|EEB32858.1| hypothetical protein DESPIG_02226 [Desulfovibrio piger ATCC 29098]
          Length = 297

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 31/254 (12%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +    +  L R  +       L  +   L   L   + +      L      S+  L + 
Sbjct: 69  LQDEAERVLQREVTTGAATEGLRGQILDLERELVQTRAERNRASQLAASGLGSRQALGRL 128

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E  V                  R +    +   +      +     L++ +  +   + +
Sbjct: 129 EESV------------------RSLQHRIELTQISIKKNEESFRARLKELEGYYGQPIRE 170

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
             +L        + SPI G ++      + +    +Q     V       I+  V    +
Sbjct: 171 GEMLPDQL---VLTSPIDGYVLQLMPNLNPDVLLPAQATPVTVGQLDPVLIQVPVYEGDL 227

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +K+G  A V  P   D   K F A I +I  I +    ++    YY V L +      
Sbjct: 228 GRIKEGGHARVEIPSLGD---KVFSATITEISWIST--SMDVAQPSYYTVKLTVP----- 277

Query: 400 DNNIELRNGFPAEV 413
           ++ +EL+ GF A V
Sbjct: 278 NSQLELKPGFKALV 291



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 58/159 (36%), Gaps = 9/159 (5%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +++G+++      +++ PF+ +I +  V  G  I  G PL+ +   +  + +  ++V+ 
Sbjct: 25  TTATGKVVATVTR-DVRLPFNAVIDEVLVRPGDAIKAGDPLVRYHLQDEAERVLQREVTT 83

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                   TE      L+ + ++++   E      L   G             + S+   
Sbjct: 84  GA-----ATEGLRGQILDLERELVQTRAERNRASQLAASGLGSRQALGRLEESVRSLQHR 138

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           +++      SI  N      +   L        ++  M+
Sbjct: 139 IELT---QISIKKNEESFRARLKELEGYYGQPIREGEML 174


>gi|194099235|ref|YP_002002326.1| MacA [Neisseria gonorrhoeae NCCP11945]
 gi|240113432|ref|ZP_04727922.1| MacA [Neisseria gonorrhoeae MS11]
 gi|254494233|ref|ZP_05107404.1| periplasmic protein [Neisseria gonorrhoeae 1291]
 gi|268599506|ref|ZP_06133673.1| periplasmic protein [Neisseria gonorrhoeae MS11]
 gi|193934525|gb|ACF30349.1| MacA [Neisseria gonorrhoeae NCCP11945]
 gi|226513273|gb|EEH62618.1| periplasmic protein [Neisseria gonorrhoeae 1291]
 gi|268583637|gb|EEZ48313.1| periplasmic protein [Neisseria gonorrhoeae MS11]
 gi|317164765|gb|ADV08306.1| MacA [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 392

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ +D++
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLDME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 83/257 (32%), Gaps = 26/257 (10%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               +++ +Y+       K  L+  + S+ Q +   M+        S+ +  Q + +  +
Sbjct: 64  QASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLDMEK-------SKLETYQAKLVSAQ 116

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             L   E  ++++  L   +    E      + L     ++ + +         +   E 
Sbjct: 117 IALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELKALIRQSKISINTAES 176

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVK 343
                 I + + GT+V             +Q    IV  +   +   + ++    I  VK
Sbjct: 177 DLGYTRITATMDGTVVAIPV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGDITKVK 235

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVILKITD 395
            G    + F   ++      KA ++ +DP ++           +      YY     +  
Sbjct: 236 AGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYARSFVP- 291

Query: 396 LAFSDNNIELRNGFPAE 412
               + + +L  G   +
Sbjct: 292 ----NPDGKLATGMTTQ 304


>gi|171910384|ref|ZP_02925854.1| secretion protein HlyD family protein [Verrucomicrobium spinosum
           DSM 4136]
          Length = 340

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/393 (11%), Positives = 112/393 (28%), Gaps = 78/393 (19%)

Query: 26  IGIIGLITWSILLPIE---ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           +G + +  W  L   +     V  +G I   +  V+I +  +G + +  V  G  +++G 
Sbjct: 1   MGGLVVAVWFYLNQGDKDGQVVHGNGRIEATE--VDIATKTAGRLDEVLVNEGDFVVEGQ 58

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L                                               +S + QL +  
Sbjct: 59  VLARI------------------------------------------QSDSIQAQLAEAE 76

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            ++    + V +               ++R+   ++L  E       + L + +  L   
Sbjct: 77  AQHRQARNAVISAS------------AQVRARESDKLAAEAVVVQRESELYAERLRLDRS 124

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + L ++ A++   L+     V  S   +     +       +                  
Sbjct: 125 EALAKRGALAVQTLDDDRARVKSSEAAISAAKAQVAAAEAAVEAS--------------- 169

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              +E    T     + +  ++      T+L+P AG + Y +             ++ IV
Sbjct: 170 KAQMEGANSTVEAAGATIARIKSDIADCTLLAPRAGRVQY-RITQPGEVLGAGGKVLNIV 228

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNN 380
             S   Y+   +    +  V  G  A +                +  +     +  +  +
Sbjct: 229 DLSD-VYMTFFLPETVVGRVPLGAEARIILDAVPQYVIPARITYVASVAQFTPKTVETAS 287

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            + +  + V  +I       +  +++ G P   
Sbjct: 288 ERQKLMFRVKARIDPELLLKHLQQVKTGVPGTA 320


>gi|73983265|ref|XP_853283.1| PREDICTED: similar to phospholipase C, beta 3
            (phosphatidylinositol-specific) isoform 2 [Canis
            familiaris]
          Length = 1230

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/223 (11%), Positives = 78/223 (34%), Gaps = 14/223 (6%)

Query: 84   LLTFEDIETTDLIDLKKV----------SIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            L+  ++ +  +L +L K            +         E              EK    
Sbjct: 963  LVKLQNRQERELRELHKKHQRKAVALTRRLLEGLAQARAESRCRHRPGVLGGENEKEEGE 1022

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
              ++  +F  +   +  ++    + +        L R     L  + L+  ++  + L  
Sbjct: 1023 EVKRYQEFQKRQVQSLLELREAQVDTEAERRLEHL-RQAQQRLREVVLDAHTTQFKKLKE 1081

Query: 194  SHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
             ++++   ++ + ++   N++S+    ++ +   + T   R +I E  N +R + E   +
Sbjct: 1082 INEREKKELQKILDRKRHNSISEAKTREKHKKEAELTEINRRHITESVNSIRRLEEAQKQ 1141

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                     +++ + L + +     ++++     + R  + I 
Sbjct: 1142 RQERLVAGQQQVLQQLAEEEPKLLAQLAQECQEHRARLPQEIR 1184


>gi|89896106|ref|YP_519593.1| hypothetical protein DSY3360 [Desulfitobacterium hafniense Y51]
 gi|89335554|dbj|BAE85149.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 385

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/328 (12%), Positives = 92/328 (28%), Gaps = 52/328 (15%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                +++ S   +       K+ ++ +     V+     S   ++   +   +      
Sbjct: 33  AAQAVVEEESYIPVEVQSAAAKTLVETVVFSGKVISDQEVSIVPKMPGKVTNINVKVGDT 92

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
              G              + +  +     E    + +  L S +++L   + L+E  A+S
Sbjct: 93  VQAGQVLFTMDTVDLQKSVDTAAIAVKSAELSYQMTKDSLDSAKENLERQRALYEAGAIS 152

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +      E  V      L+    + +      N+                          
Sbjct: 153 KVQFEGIEDQVTSLENNLKAVQLQVEQAQLGYNQ-------------------------- 186

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                             T+ +P++GT+           A Q+   + +       Y+  
Sbjct: 187 ----------AHDAISDMTVTAPVSGTVAALNVV-VGQMASQAMAAVTVT-QLDALYVSL 234

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V    +  +K G  ATV         +K+ K ++  + P  +QQ         Y V + 
Sbjct: 235 SVPENIVNTLKVGQEATVII---NSAGQKEIKGVLTSLAPAANQQLGL------YPVKVT 285

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           I +         ++ G  A+V       
Sbjct: 286 IENTENL-----VKPGMFAKVEIPTATK 308



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 52/147 (35%), Gaps = 3/147 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +  +V  SG+++++  V  +     G +    V+ G  +  G  L T + ++   
Sbjct: 51  AAAKTLVETVVFSGKVISDQEVSIV-PKMPGKVTNINVKVGDTVQAGQVLFTMDTVDLQK 109

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +D   +++K+        K +LD      +     +E+     + F G      S    
Sbjct: 110 SVDTAAIAVKSAELSYQMTKDSLDSAKENLERQRALYEAGAISKVQFEGIEDQVTS--LE 167

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDL 181
             + +V   ++         +    D+
Sbjct: 168 NNLKAVQLQVEQAQLGYNQAHDAISDM 194


>gi|323949584|gb|EGB45472.1| efflux pump membrane protein [Escherichia coli H252]
          Length = 248

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 64/221 (28%), Gaps = 32/221 (14%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L ++  +S+  L   +  +  S   L   I   K     +                   
Sbjct: 2   PLAKQGVISKEALEHTKDTLISSKAALNAAIQAYKANKALVMNTPL-------------- 47

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
                 Q    +            ++  I SP+ G I   +S          Q LM +VP
Sbjct: 48  ----NRQPQVIEAADATKEAWLALKRTDIKSPVTGYIAQ-RSVQVGETVSPGQSLMAVVP 102

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID----------PI 373
             +  ++ A     Q+  V+ G +  +    Y +     F   +  I+          P 
Sbjct: 103 A-RQMWVNANFKETQLTDVRIGQSVNIISDLYGENV--VFHGRVTGINMGTGNAFSLLPA 159

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
            +   N ++  +   V + +      ++ + +     A + 
Sbjct: 160 QNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSMTATID 200


>gi|308750960|gb|ADO44443.1| efflux transporter, RND family, MFP subunit [Hydrogenobacter
           thermophilus TK-6]
          Length = 347

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 47/106 (44%), Gaps = 3/106 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS---ALDFL 120
           SG + +   + G  + QG PLL  +  +  + +   + ++   R + + +++      FL
Sbjct: 64  SGRVLELLTDEGQLVRQGQPLLKIDPSDYQNTLRQLEANLMQARANYENQRAIYERRKFL 123

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +  +  + FE+ + QL  +  +  +  +++ N  +     +L+ 
Sbjct: 124 YEQNLIAREDFENAKTQLKVYQDQVSAIEAQLRNARLQLSRTTLRA 169



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 45/125 (36%), Gaps = 5/125 (4%)

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            LL+   + +   + L +   +  +D     R +  + ++ R N   Q+ +      LY+
Sbjct: 69  ELLTDEGQLVRQGQPLLK---IDPSDYQNTLRQLEANLMQARANYENQRAIYERRKFLYE 125

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           +  +   ++       L+  Q   +   ++L        + T+ +P +G I         
Sbjct: 126 QNLIAREDFEN-AKTQLKVYQDQVSAIEAQLRNARLQLSRTTLRAPFSGYIAQKFVN-VG 183

Query: 310 NYAQQ 314
           +Y   
Sbjct: 184 DYITP 188


>gi|254559151|ref|YP_003066246.1| membrane protein [Methylobacterium extorquens DM4]
 gi|254266429|emb|CAX22193.1| putative membrane protein, component of efflux system
           [Methylobacterium extorquens DM4]
          Length = 343

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 24/224 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWS---ILLP------IE---------ISVSSSGEI 50
           ++R  P    R  LL+I+   G    +             I+             S+G I
Sbjct: 1   MRRTRPGPRARGALLAILLATGFAVAAPPPSFAQSRLKQLIDRLRGQKMPEGIAKSNGRI 60

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
                 V++ + ++G I K  V+ G ++  G  + T    ET   +   +  +   +  +
Sbjct: 61  EATQ--VDVAAKYAGRISKLLVKEGDEVSAGQVVATISSPETEAQLRGAQSQVLRAKKSL 118

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLL---DFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             E  AL    N       A  SR ++L+       +             +++  +   +
Sbjct: 119 -AEAVALIAQRNSDLTFADADYSRGKELVGKGYMAKQIFDQRKAKAEAAKAALDAAKAQE 177

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                ++     D++   ++L  L+    +D  +   L  +  V
Sbjct: 178 DQAKFAVQSAEADVQRLEAMLVDLVLRAPRDGRVQYRLAREGEV 221


>gi|242280702|ref|YP_002992831.1| efflux transporter RND family, MFP subunit [Desulfovibrio
           salexigens DSM 2638]
 gi|242123596|gb|ACS81292.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           salexigens DSM 2638]
          Length = 409

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 60/215 (27%), Gaps = 25/215 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNM---------LRHINELYDEANLEFANYLKEIS 263
           Q  +NQ    +  S   +R++  + K+          LR  N +  +             
Sbjct: 115 QARVNQLRAALESSRANVRKSQVDLKDKKNECTRMGNLRKKNAVSQKKLDSAITARDMAD 174

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMK 320
             L + +       + L   E   ++ +I SPI G ++      +            L  
Sbjct: 175 AHLAEARAMVRQAEANLNEAEANLKKASITSPIDGLVLTRHV-EAGQAVSSGMNTPELYT 233

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +    K   +   V    +  +K G  A      Y   +       +             
Sbjct: 234 LATSLKEMRLELNVDEADVGKIKAGQKAVFTVDAYEGRKFPAKFIKLRY-------APQR 286

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +Q    Y  I  +      + ++ LR G  A    
Sbjct: 287 VQGVVTYVGIFSVD-----NRDLLLRPGMTAAAKI 316



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 74/216 (34%), Gaps = 16/216 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +    + V++SG +    N V +    SG I K   +   ++++G  L          
Sbjct: 58  ACIGNFTVDVAASGTLQP-RNKVIVGCEISGTIDKIFKDYNDKVVKGELLARMST----- 111

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             D  +  +  LR  +++ ++ +    ++ D+ +K  E      L               
Sbjct: 112 --DELQARVNQLRAALESSRANV--RKSQVDLKDKKNECTRMGNLRKKNAVSQKKLDSAI 167

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                    L      +R    N    E +++L +A ++S    L + +++    AVS  
Sbjct: 168 TARDMADAHLAEARAMVRQAEANLN--EAEANLKKASITSPIDGLVLTRHVEAGQAVSSG 225

Query: 215 ----DLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
               +L      + +  LEL  +  +   +      
Sbjct: 226 MNTPELYTLATSLKEMRLELNVDEADVGKIKAGQKA 261


>gi|153206126|ref|ZP_01945389.1| ABC transporter, periplasmic substrate-binding protein [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165918167|ref|ZP_02218253.1| ABC transporter, periplasmic substrate-binding protein [Coxiella
           burnetii RSA 334]
 gi|212217785|ref|YP_002304572.1| macrolide-specific efflux protein [Coxiella burnetii CbuK_Q154]
 gi|120577256|gb|EAX33880.1| ABC transporter, periplasmic substrate-binding protein [Coxiella
           burnetii 'MSU Goat Q177']
 gi|165918027|gb|EDR36631.1| ABC transporter, periplasmic substrate-binding protein [Coxiella
           burnetii RSA 334]
 gi|212012047|gb|ACJ19427.1| macrolide-specific efflux protein [Coxiella burnetii CbuK_Q154]
          Length = 391

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 33/285 (11%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           L     T +K+F    +SV  +  +     + +  +  D   K    +    +  K    
Sbjct: 64  LSPVDGTVTKLFFTYGASVEENQNIVEIHSQKLAEDYRDAVTKYLQAKDTYETSLKSFAG 123

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L+E   +S+ +  + ER  + + +               +N       LE      +
Sbjct: 124 TRALYEAGIISEEEF-RTERSQHDTNV---------------LNFYQARFTLEKVLREAD 167

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV----------YNQSFSSSNY 311
           I     +  R  AD  +   IL+K      + SP  G  +                    
Sbjct: 168 IDPKTVEGLR-IADINAVAQILQKHFRHILVKSPGKGVALFPVKSEDDKDGKGRLVVGME 226

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +Q Q ++ I        I  +V+   I  +  G  ATV    +  I       I+  + 
Sbjct: 227 VKQGQLILSIG-DLSGFTITLQVSEININRLHSGLKATVTGDAFPGIT---LHGIVTAVA 282

Query: 372 PIIS-QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              + +Q         + + +++  +     N+ +  G  A V  
Sbjct: 283 RQSNPEQSEGDGALSTFNIEVQVPGVTKEQRNV-IHVGMSATVEI 326


>gi|87125013|ref|ZP_01080860.1| Secretion protein HlyD [Synechococcus sp. RS9917]
 gi|86167333|gb|EAQ68593.1| Secretion protein HlyD [Synechococcus sp. RS9917]
          Length = 416

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 84/264 (31%), Gaps = 27/264 (10%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
               +       W+++  I + V  S  +L   +   + S   G +    V  G+++ + 
Sbjct: 14  WPIALVTGATAVWAVVPAINVQVFGSAVLLAPGDRRGLYSRSPGQVLNLSVPVGTRVAKD 73

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L+  +                     ID           +   L++  E+  +Q    
Sbjct: 74  QVLVRLD--------------------RIDQAAPGGAAPTGQPQALDRQLEANADQQQGL 113

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           + +  +  S+V      ++ + +       + +      LE+     + ++ ++      
Sbjct: 114 VEQLRANTSEV-----EALRQQITTLQVSNQPVGQQLTALESLRQ--KQVIPTYSPLWVA 166

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            ++L+  N  +   L  +   +  +   L+    E + +   +  +     L      + 
Sbjct: 167 AQDLYLGNKAAIRSLEAKIAQLEANRGLLQAQQAELRAVRAELEAVSQSLELRAPEPGRL 226

Query: 262 ISRDLEQNQRTFADEMSKLTILEK 285
           +S  +E+ Q     E      LE+
Sbjct: 227 VSWAVEEGQPVLPGERLGTLALER 250


>gi|119774137|ref|YP_926877.1| multidrug resistance efflux pump [Shewanella amazonensis SB2B]
 gi|119766637|gb|ABL99207.1| multidrug resistance efflux pump [Shewanella amazonensis SB2B]
          Length = 354

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 96/299 (32%), Gaps = 46/299 (15%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E L +     +    +     +  V +SL      ++         + K    RA L + 
Sbjct: 71  ELLFEIDATQYQIAREKAQADLERVGQSLGASTAAVQVA-------QAKVGDARAALDNA 123

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +   T ++ L E+  +SQ +L+       ++   L           +++           
Sbjct: 124 KAQATRVETLAERGVLSQAELDNAREAAQRAQASLEAAQASLLQAKQNLGP--------- 174

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                     + +N       M+ L   E   ++  +++P  G +   Q  S   Y    
Sbjct: 175 ----------VGENNPELKAAMAALAKAELDLKRTRVVAPSRGVVTNVQL-SPGQYMAPG 223

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI----- 370
           QP +  +   +  +I A +    ++H+++G    + F          F+ +++ I     
Sbjct: 224 QPALTFI-DPREVWISAMMRENSLEHIREGGKVGLVFDALPGR---VFEGVVDSIGWGSG 279

Query: 371 -------DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
                             Q  + + V ++      ++   ELR G    V F    +++
Sbjct: 280 GANNIDQTTGFETAQTGKQQAKRFPVHIRFDTAPMAN---ELRFGSQVTVAFYTGESSV 335



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 57/172 (33%), Gaps = 7/172 (4%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N    +     ++++GI     W+     +     + +      +V I    +G I +  
Sbjct: 6   NTSKKISTYLFVTVLGIWLYSLWA-----DRVTPMTTQAFVHAYLVRITPEVAGNIVQVN 60

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+N  ++  G  L   +  +     +  +  ++ +   +    +A+     K      A 
Sbjct: 61  VDNDKRVEAGELLFEIDATQYQIAREKAQADLERVGQSLGASTAAVQVAQAKVGDARAAL 120

Query: 132 ESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++ + Q   ++ L +         +    +  R+         S+   + +L
Sbjct: 121 DNAKAQATRVETLAERGVLSQAELDNAREAAQRAQASLEAAQASLLQAKQNL 172


>gi|46190582|ref|ZP_00121322.2| COG0577: ABC-type antimicrobial peptide transport system, permease
           component [Bifidobacterium longum DJO10A]
 gi|189440378|ref|YP_001955459.1| SalY-type ABC antimicrobial peptide transport system permease
           component [Bifidobacterium longum DJO10A]
 gi|189428813|gb|ACD98961.1| SalY-type ABC antimicrobial peptide transport system permease
           component [Bifidobacterium longum DJO10A]
          Length = 1211

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 75/225 (33%), Gaps = 26/225 (11%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E    ++  K  + + R  +D  ++ L     K +      +    Q+   L       +
Sbjct: 384 EARTQLESGKTQLTSARKQLDAAQTELTANRTKIEQGITQIDQGMAQIDQMLPMIQQANN 443

Query: 151 KVFN------------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH-QK 197
            +                I  +   L + L  + SI   R  L  K + L+    S  Q+
Sbjct: 444 LLAQLDPNIDLNSPTWQAIKQLLARLGITLPEVPSISELRQQLAAKQTELQTQRDSLTQQ 503

Query: 198 DLTMMKNLFEKNAVSQNDLNQQ-------ERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + + L E  A +Q+ L+QQ       E+       +L     E +     +     +
Sbjct: 504 KADLQRTLNETIAPAQSTLDQQNAQLTAKEQEAAAGEAQLNTKSAELEANAATLETQSAQ 563

Query: 251 ANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              + A        L+E  R LE+ ++  AD  +KL   +   + 
Sbjct: 564 LEAQAAQLASGKQQLEEGERQLEEGEQQLADGKAKLDDAQSELDA 608


>gi|332184722|gb|AEE26976.1| Putative Co/Zn/Cd efflux system membrane fusion protein
           [Francisella cf. novicida 3523]
          Length = 457

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 69/202 (34%), Gaps = 26/202 (12%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLI---------TWSILLPIEISVSSS-------GEILNE 53
           K+    ++   TL+   GI G             +  +P  ++V+SS        +++N 
Sbjct: 65  KKTASIAIVVATLMLFGGIFGFAEFIQSMIKKGMAAYVPQPVAVTSSVVEKTDWKQVINT 124

Query: 54  -DNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
                 ++     S   GI+ +   ++G ++ +G  L   +  +    ++    ++K  +
Sbjct: 125 IGEAQAVQTTEISSQSGGIVSEINFKSGQEVKKGDLLFKLDTSQLKANLEEALSNLKLAK 184

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                 K   + L  +    +++ +      L  L +  +  S++    + + +      
Sbjct: 185 ----ITKDRYNKLVEQKATSKESADKANADYLSALAQVQNIESQIGFKEVRAPFDGKIGI 240

Query: 168 LTRMRSIYLNRLDLENKSSLLR 189
                  Y N  D     + + 
Sbjct: 241 RNISLGQYFNNGDNAATLTTID 262



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 72/205 (35%), Gaps = 25/205 (12%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           N  S  ++ + + +    T +L+ N+ E  + L  + ++  +   +            ++
Sbjct: 148 NFKSGQEVKKGDLLFKLDTSQLKANLEEALSNL-KLAKITKDRYNKLVEQKATSKESADK 206

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHS 325
               +   ++++  +E     K + +P  G I   ++ S   Y         L  I    
Sbjct: 207 ANADYLSALAQVQNIESQIGFKEVRAPFDGKI-GIRNISLGQYFNNGDNAATLTTI---- 261

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQ 384
              +I   V   ++  +  G    + F  Y+D    + F   I  I+  I+  + ++  Q
Sbjct: 262 DPIFITFPVPQNKVSMISVGQ--EINF--YSDSYPGETFTGKITAINSFINDSNRSITVQ 317

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
             Y           ++ + ++  G 
Sbjct: 318 ATY-----------ANPHHKIVAGM 331


>gi|157961388|ref|YP_001501422.1| RND family efflux transporter MFP subunit [Shewanella pealeana ATCC
           700345]
 gi|157846388|gb|ABV86887.1| efflux transporter, RND family, MFP subunit [Shewanella pealeana
           ATCC 700345]
          Length = 451

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 87/288 (30%), Gaps = 51/288 (17%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   ++      K    ++    L   +L+    +        + DL   + L ++N +S
Sbjct: 107 YQIRLAQAQADRKALEGQIEGKKLQLENLKLSLEIENNRYDLVKSDLKRKETLRKQNLIS 166

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q++L            E +  + +Q+ +             E  N L  +  + +  Q  
Sbjct: 167 QSEL----------DGERQNLLAQQQKL------------QELDNSLNLMPNETQILQAQ 204

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +++    +    +  I  P  G +       S       Q L +I    ++  + A
Sbjct: 205 LLQAIAREQEAQSQLTKTEIRLPFEGRVAEVNVEGS-QVVSPQQVLARIN-GIEVMEVEA 262

Query: 333 KVTPKQIQHVKK------------------GYTATVRF--PHYADIREKKFKAIIEKIDP 372
           +V+   +  + K                  G TA +      Y+     +   I E +DP
Sbjct: 263 QVSLGDVMTLMKTVNRPQGQDKQLPRAEALGLTAEITLKGATYSFSWPAEITRIGETVDP 322

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            ++  +  LQ ++ Y              +  L NG            
Sbjct: 323 TLATVNIVLQVEQQYR-------ELKIGQSPPLVNGMFVSARIKGGER 363


>gi|168334751|ref|ZP_02692879.1| Secretion protein HlyD [Epulopiscium sp. 'N.t. morphotype B']
          Length = 628

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 85/260 (32%), Gaps = 17/260 (6%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-NL 106
           G ++    V  I SP  G ++   VE+G  +  G  L T +D      ID   V+++ + 
Sbjct: 64  GTLMPS-EVANIISPVMGFVENIYVEDGDYVTSGQLLYTIDDDNVVAQIDSAMVALESSQ 122

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC---SKVFNYGISSVYRS 163
           +       +A + + N+    E    +RE+ L +      +     S++    I ++ ++
Sbjct: 123 KSKEQALFNARNAVTNQEMSKETLLLNREQTLYNAENTIKNAEIALSQLELGYIQALEQA 182

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLR--------ALLSSHQKDLTMMKNLFEKNAVSQND 215
                             E +               +   +K +   ++  E    +  D
Sbjct: 183 DTQIKNANLQYDSAVAGYELQFGTADDISNMNTNKQIEDLEKTIEDTRDQIEDAEEAAED 242

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHIN---ELYDEANLEFANYLKEISRDLEQNQRT 272
           + + +  + +    + + + +Q  +L       E+Y + +        EI +  EQ   T
Sbjct: 243 IKEAQEDLEELLDVMEDQMDDQYALLNSGTLSPEMYAQVDASIQATRTEIFKQ-EQTLDT 301

Query: 273 FADEMSKLTILEKTREQKTI 292
                              +
Sbjct: 302 LETNYENALEAIDDIRDTVV 321



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 81/252 (32%), Gaps = 32/252 (12%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
             ++ T   I+  + +I++ R  I+  + A + +    + LE+  +  E+Q+ D     +
Sbjct: 210 ISNMNTNKQIEDLEKTIEDTRDQIEDAEEAAEDIKEAQEDLEELLDVMEDQMDDQYALLN 269

Query: 147 S-----TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           S           +  I +    +  +   + ++  N  +       +R  +   +++L  
Sbjct: 270 SGTLSPEMYAQVDASIQATRTEIFKQEQTLDTLETNYENALEAIDDIRDTVVDLEENLAF 329

Query: 202 MKNLF---------EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            K +          E+       + Q E  + ++    R+ I   +  ++   +    A 
Sbjct: 330 QKEVVNLQNTNLKGEQVKAQSLSITQAENAIAQAEDGRRKTIESYEMQIKQARDSVQAAK 389

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEK------------------TREQKTILS 294
                  + +   + Q           L I  +                    +Q T+ S
Sbjct: 390 DAAEFTRRSLENXIXQTDTGLKTSRDTLNITAQMSDMQIKNAQTTINNAKIQLDQYTVES 449

Query: 295 PIAGTIVYNQSF 306
           PI+G I      
Sbjct: 450 PISGIIENITII 461


>gi|296531339|ref|NP_001171812.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-3
            isoform 2 [Homo sapiens]
 gi|119594637|gb|EAW74231.1| phospholipase C, beta 3 (phosphatidylinositol-specific), isoform
            CRA_b [Homo sapiens]
          Length = 1167

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 82/207 (39%), Gaps = 8/207 (3%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              T  L+D    +    RC +     AL    +  D  E   E++  Q  +F  +   + 
Sbjct: 920  TLTRRLLDGLAQAQAEGRCRL--RPGALGGAADVEDTKEGEDEAKRYQ--EFQNRQVQSL 975

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK- 208
             ++    + +  +     L R     L  + L+  ++  + L   ++++   ++ + ++ 
Sbjct: 976  LELREAQVDAEAQRRLEHL-RQALQRLREVVLDANTTQFKRLKEMNEREKKELQKILDRK 1034

Query: 209  --NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              N++S+  +  + +   + T   R +I E  N +R + E   + +       +++ + L
Sbjct: 1035 RHNSISEAKMRDKHKKEAELTEINRRHITESVNSIRRLEEAQKQRHDRLVAGQQQVLQQL 1094

Query: 267  EQNQRTFADEMSKLTILEKTREQKTIL 293
             + +     ++++    ++ R  + I 
Sbjct: 1095 AEEEPKLLAQLAQECQEQRARLPQEIR 1121


>gi|62179466|ref|YP_215883.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62127099|gb|AAX64802.1| paral putative membrane protein [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322713935|gb|EFZ05506.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 372

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  +      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRVGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKINDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 66/174 (37%), Gaps = 17/174 (9%)

Query: 18  KRMTLLSIIGIIGLITW-SILLPI-------------EISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+  W  I  P+             E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMAGWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G  + +   L   +  +  + I   + ++  L    + +++A +    +
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNA--ERQQAAAELKLAR 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +   ++ + +        +T   V    I ++   +K     + +   N
Sbjct: 128 VTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTN 181


>gi|78059969|ref|YP_366544.1| HlyD family secretion protein [Burkholderia sp. 383]
 gi|77964519|gb|ABB05900.1| Secretion protein HlyD family [Burkholderia sp. 383]
          Length = 304

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 80/241 (33%), Gaps = 34/241 (14%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------ANY 258
            +   V++ D+        + TL + +   +       + +  DEA              
Sbjct: 62  VDNQRVAKGDVL-YRIDPQRFTLAVEQAEAQVAATAESMRQKRDEAQRRTGLDDLVPRED 120

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           ++  SR +   Q      ++ L + +   E+ T+ SP+ G +   +     +YA + +P 
Sbjct: 121 IQRSSRAVSIAQAEHRKALAALDVAKLDLERTTLRSPVDGYVTQLRLRH-GDYAVEGKPG 179

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + ++  +   +I       +++ +  G  AT+R   +           +  I   I+ ++
Sbjct: 180 ISVL-DAHSFWITGYFEETKLRRIATGAPATIRLMGFD----PLLSGHVTSIGRGIADEN 234

Query: 379 NNL---------------QTQEYYEVILKITDLAFSDNNIELRNGFP--AEVLFTAKNTT 421
             L               +  +   V ++I  +      + L  G     EV       T
Sbjct: 235 GTLDELGLPAVNPTFSWVRLAQRIPVRIEIDQV---PAGVLLAAGMTCSVEVGERGHERT 291

Query: 422 L 422
            
Sbjct: 292 P 292



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 34/111 (30%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV I    SG +    V +  ++ +G  L   +    T  ++  +  +      + 
Sbjct: 41  VSAHVVRIAPEVSGTVVDVAVVDNQRVAKGDVLYRIDPQRFTLAVEQAEAQVAATAESMR 100

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            ++          D++ +    R  + +      H       +     + R
Sbjct: 101 QKRDEAQRRTGLDDLVPREDIQRSSRAVSIAQAEHRKALAALDVAKLDLER 151


>gi|332883149|gb|EGK03432.1| hypothetical protein HMPREF9456_01499 [Dysgonomonas mossii DSM
           22836]
          Length = 414

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 101/274 (36%), Gaps = 17/274 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE++V++SG+++     + + SP +  I +   E G  + +  P+L  E          K
Sbjct: 58  IEVTVNASGKVIPLTEEIIV-SPINSRILEVYKEAGDSVNKDEPILKLELASIETDYKQK 116

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
               +  +  +   + +LD   +   +  +  + + +QL   L       S   +     
Sbjct: 117 LDEKEMKKSKLIQSQVSLDNTISDLQMQLQVKDMKLKQLQTELKNERYLDSIGASTSDKV 176

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
              +L  ++ ++    L +  + N+     A +   Q DL++    FEK+      L + 
Sbjct: 177 RQAALNYEVAKLEFQQLKQ-QIVNEKKNASAEVKVQQLDLSI----FEKSLAESARLLKD 231

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            RI+      L    ++  + +    ++   ++L     L EI+    +   + A  + K
Sbjct: 232 ARILSPQKATLTYVNNQIGSQVSAGTQIAIISDLSHFKVLTEIADSYAEKLSSGAKAIIK 291

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +  L+           + GT+V       +    
Sbjct: 292 IGQLQ-----------LEGTVVNITPSVKNGVIN 314


>gi|330503890|ref|YP_004380759.1| RND family efflux transporter MFP subunit [Pseudomonas mendocina
           NK-01]
 gi|328918176|gb|AEB59007.1| RND family efflux transporter MFP subunit [Pseudomonas mendocina
           NK-01]
          Length = 340

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 76/220 (34%), Gaps = 20/220 (9%)

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           S    +  M++   E    + +    Q        + L + I   +      N    E N
Sbjct: 47  SLRSDESVMIRPEIEGRLATLHFREGQAVTAGDLLVSLDDAIARAEFAQARANLDLAEKN 106

Query: 253 LEFANYLKEI----SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            + A  L +     ++ L++ Q       +   + +   ++  I +P  GT +  +  S 
Sbjct: 107 HQRAQMLFQRGASNAQALDEAQSQLQAARAAQALAQARLDKTQIKAPYDGT-LGLRQASV 165

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
            +Y    Q ++ +        +  ++  K +  V+ G T  +    Y   R   F+  I 
Sbjct: 166 GDYLSAGQNIVNL-EVLDPLKVDFRIPQKAVAQVRLGQTVEITLDTYPGER---FRGEIY 221

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            I+P + +   +   + +            ++++  LR G
Sbjct: 222 AINPRLDEAGRSQAIRAH-----------IANDDRRLRPG 250



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/118 (9%), Positives = 29/118 (24%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +       G  +  G  L++ +D          + ++     +    +       +  
Sbjct: 62  GRLATLHFREGQAVTAGDLLVSLDDAIARAEFAQARANLDLAEKNHQRAQMLFQRGASNA 121

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             L++A    +                             +  +    S   N ++LE
Sbjct: 122 QALDEAQSQLQAARAAQALAQARLDKTQIKAPYDGTLGLRQASVGDYLSAGQNIVNLE 179


>gi|298369960|ref|ZP_06981276.1| macrolide-specific efflux protein MacA [Neisseria sp. oral taxon
           014 str. F0314]
 gi|298281420|gb|EFI22909.1| macrolide-specific efflux protein MacA [Neisseria sp. oral taxon
           014 str. F0314]
          Length = 394

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 1/106 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  +VS++GEI    N+V + S  SG IKK  V+ G Q+ +G  +         + ++
Sbjct: 42  GNIHQTVSATGEISPS-NLVTVGSQASGQIKKLYVKLGQQVKKGDLIAEINSTTQVNTLN 100

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            +K  ++  +  + + + AL+    KY      ++ +     DF  
Sbjct: 101 TEKSKLETYQAKLVSAEIALNSAEKKYKREAALWKEKATSKEDFES 146



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 91/281 (32%), Gaps = 26/281 (9%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            G  H T S       S++         +++ +Y+       K  L+  + S+ Q +   
Sbjct: 41  RGNIHQTVSATGEISPSNLVTVGSQASGQIKKLYVKLGQQVKKGDLIAEINSTTQVNTLN 100

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +        S+ +  Q + +  +  L   E  ++++  L        E      + L  
Sbjct: 101 TEK-------SKLETYQAKLVSAEIALNSAEKKYKREAALWKEKATSKEDFESAQDALAA 153

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY--AQQSQPLM 319
              ++ + + +       +   E       I + + GT+V             Q +  ++
Sbjct: 154 AKANVAELKASIKQTKISINTAESDLGYTRITATMDGTVVAIPVEEGQTVNAVQSTPTII 213

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--- 376
           ++  +      + ++    I  VK G    + F   ++  E   KA ++ +DP ++    
Sbjct: 214 QLA-NLDTMLNKMQIAEGDITKVKAGQ--DISFTILSEPDEP-IKAKLDSVDPGLTTMSL 269

Query: 377 -----QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                  +      YY     + +    D  + +  G   +
Sbjct: 270 GSYTASTDTTSNAIYYYARALVPNP---DGKLSI--GMTTQ 305


>gi|209963651|ref|YP_002296566.1| HlyD family secretion protein [Rhodospirillum centenum SW]
 gi|209957117|gb|ACI97753.1| HlyD family secretion protein [Rhodospirillum centenum SW]
          Length = 358

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 53/169 (31%), Gaps = 5/169 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V  G  +  G  L   +       +   +  ++ +   ++T +S +     + 
Sbjct: 58  GRVKDILVNEGDFVTAGQVLAVMDTAVLDAQLKEAQAQLRQVEIAVETARSLVTQRQAER 117

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +        RE +L+    +     S+      +   + +       +S        +  
Sbjct: 118 EAAVAVVAQREAELVAAQKRL--ARSQDLGTRGNISPQQIDDDRAEFQSTKAAVAAAKAN 175

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
            +   A + S    +   +   E    ++  L + +  +  STL    +
Sbjct: 176 LAAADAAIGSATSQVVGAEAQVE---ATRATLQRIQADIDDSTLRAPRD 221


>gi|193078097|gb|ABO13037.2| Putative RND family drug transporter [Acinetobacter baumannii ATCC
           17978]
          Length = 373

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 76/207 (36%), Gaps = 8/207 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +  + +++++G+I    W         +   G +  E   V + +     I++  V+ G 
Sbjct: 53  IIAVVVIALLGLILFGLWKSYQ--SKPIELQGRVEAET--VHVSTKVPSRIEEIYVQEGQ 108

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           +I +G PL+     E          ++++      T        N   D L   ++S + 
Sbjct: 109 KISKGQPLVRLVSPEIEAKKQQALATLQSALAFQSTVDRGSQQEN--IDTLYANWQSMKA 166

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q  +     +     ++  G+ S  R  +M   +  +  L+    + + +  +   +S Q
Sbjct: 167 Q-ANLAKTTYQRGENLYRQGVISRQRRDEMLAAQTSAQELSEAAYQ-QYARAKRGSTSQQ 224

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIV 223
           K     +    K AVS+    + E  +
Sbjct: 225 KSTADAQVEIAKAAVSEAQALEAETRL 251


>gi|161504016|ref|YP_001571128.1| hypothetical protein SARI_02109 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|189041079|sp|A9MIT3|YBHG_SALAR RecName: Full=UPF0194 membrane protein ybhG; Flags: Precursor
 gi|160865363|gb|ABX21986.1| hypothetical protein SARI_02109 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 331

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 81/208 (38%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  + + Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLSQYRTGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   +   +  T+++P  GT++  ++    +       ++ +   ++  ++
Sbjct: 185 ASLEQAKAQLAQAQLDLQDTTLIAPSNGTLLT-RAVEPGSMLNAGSTVLTLS-LTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLSQTQPGREILL---YTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
            Y + + +TD   +     LR G P  V
Sbjct: 300 VYRLRIIVTDADDA-----LRQGMPVTV 322



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/351 (11%), Positives = 101/351 (28%), Gaps = 53/351 (15%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + + +I+ +I   TW      +  ++  G +  +   V I     G +    V+ G  I 
Sbjct: 9   LAIAAIVTVIAGGTWWYQSRQDDGLTLYGNV--DIRTVNISFRVGGRLASLNVDEGDTIK 66

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G  L   +     + +   K  +   +   D   +             +  E  +    
Sbjct: 67  AGQVLGELDHAPYENALMQAKAGVSVAQAQYDLMLAGY-----------RDEEIAQAAAA 115

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               +     ++ F      +++S  +    + +   +R   +       A L S Q  L
Sbjct: 116 VRQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQ-------ATLKSAQDKL 168

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           +  +    +  ++Q           K++LE  +    Q  +      L   +N       
Sbjct: 169 SQYRTGNREQDIAQ----------AKASLEQAKAQLAQAQLDLQDTTLIAPSNGTLLTRA 218

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS---------- 309
            E    L          +++   +    +++ +     G       ++            
Sbjct: 219 VEPGSMLNAGSTVLTLSLTRPVWVRAYVDERNLSQTQPGR--EILLYTDGRPDKPYHGKI 276

Query: 310 NYAQQSQPLMKIVPHS-------KLTYIRAKVTPKQIQ-HVKKGYTATVRF 352
            +   +    +  P +            R ++        +++G   TV+F
Sbjct: 277 GFVSPT---AEFTPKTVETPDLRTDLVYRLRIIVTDADDALRQGMPVTVKF 324


>gi|21619170|gb|AAH32659.1| Similar to phospholipase C, beta 3 (phosphatidylinositol-specific)
            [Homo sapiens]
          Length = 1191

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 82/207 (39%), Gaps = 8/207 (3%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              T  L+D    +    RC +     AL    +  D  E   E++  Q  +F  +   + 
Sbjct: 944  TLTRRLLDGLAQAQAEGRCRL--RPGALGGAADVEDTKEGEDEAKRYQ--EFQNRQVQSL 999

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK- 208
             ++    + +  +     L R     L  + L+  ++  + L   ++++   ++ + ++ 
Sbjct: 1000 LELREAQVDAEAQRRLEHL-RQALQRLREVVLDANTTQFKRLKEMNEREKKELQKILDRK 1058

Query: 209  --NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              N++S+  +  + +   + T   R +I E  N +R + E   + +       +++ + L
Sbjct: 1059 RHNSISEAKMRDKHKKEAELTEINRRHITESVNSIRRLEEAQKQRHDRLVAGQQQVLQQL 1118

Query: 267  EQNQRTFADEMSKLTILEKTREQKTIL 293
             + +     ++++    ++ R  + I 
Sbjct: 1119 AEEEPKLLAQLAQECQEQRARLPQEIR 1145


>gi|91782915|ref|YP_558121.1| RND efflux system membrane fusion protein [Burkholderia xenovorans
           LB400]
 gi|91686869|gb|ABE30069.1| RND efflux pump, membrane fusion protein, CzcB subfamily
           [Burkholderia xenovorans LB400]
          Length = 433

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 55/145 (37%), Gaps = 4/145 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           ++   + + +++ G +    NV  +    SG +++   + G  + +G  L   +      
Sbjct: 74  AVQGEMPVVLTALGTVTPLANV-TVLPQLSGTLQEVYFKEGQMVKKGDVLAQIDPRPYQI 132

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +D  + ++      + T +  L     L ++  +  +  +++   +  + G   S  + 
Sbjct: 133 SLDNAQGTLARDEALLQTARLDLKRYQTLLSQDSIASQQVDTQASLVRQYEGTVKSDKAN 192

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYL 176
           +  Y +  VY  +   ++    +  
Sbjct: 193 IDTYKLDLVYARITAPVSGRVGLRQ 217


>gi|332295874|ref|YP_004437797.1| efflux transporter, RND family, MFP subunit [Thermodesulfobium
           narugense DSM 14796]
 gi|332178977|gb|AEE14666.1| efflux transporter, RND family, MFP subunit [Thermodesulfobium
           narugense DSM 14796]
          Length = 360

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 8/167 (4%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            D +++ R   K+    + N+            LYDE  L     + +I+   E  Q  +
Sbjct: 103 QDASERVRQAEKNLDAAKLNLSLSNATYMRYKALYDEKALS-QQEMDQITTQKELAQTNY 161

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               + L      R   T+ SPI+G +   +       A    PL+  V ++    + A 
Sbjct: 162 ERAKAALEEARVMRSFYTVTSPISGIVSSKKVD-VGTTAMPGMPLLN-VENTSSFELDAN 219

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           V  K  Q +K G    V+          + +  I +I P +     +
Sbjct: 220 VDSKYSQDLKVGSPVKVKIDS-----MPEIEGKISEIVPSVDPMSRS 261



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 3/116 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           +SG +  +  +  I S   G I    V++G ++ +G  LLT  D + ++ +   + ++  
Sbjct: 60  ASGTVKAKI-ISVITSKVMGTITSINVKDGDRVSEGEVLLTIYDQDASERVRQAEKNLDA 118

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            + ++    S   ++  K    EKA   +E   +    +   T  +     +    
Sbjct: 119 AKLNLSL--SNATYMRYKALYDEKALSQQEMDQITTQKELAQTNYERAKAALEEAR 172


>gi|77456374|ref|YP_345879.1| hypothetical protein Pfl01_0146 [Pseudomonas fluorescens Pf0-1]
 gi|77380377|gb|ABA71890.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
          Length = 439

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 55/158 (34%), Gaps = 4/158 (2%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  SV +  E++ +   V       G+I +F V+    +  G  LL FE        D+
Sbjct: 191 PVRQSVLAPAEVVPQGGRVVAAPLD-GVIAEFLVKPNQSVKTGDLLLRFESTTLKAQADV 249

Query: 99  KKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            + ++      +             +++ D+L    E +  +        + +  +    
Sbjct: 250 AERALGVAEAELKANSQRSFVDAESSSRVDLLAARAEQKRAERDYARELLNRSEVRAERD 309

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           GI+    + +     +++        +   + LR  L+
Sbjct: 310 GIAVFADAERWTGKPVQTGERLMEIADPSQAELRIELA 347



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 44/133 (33%), Gaps = 7/133 (5%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +TL+ + ++ E+      + E   +AN + +    E S  ++        + ++    
Sbjct: 239 ESTTLKAQADVAERA---LGVAEAELKANSQRSFVDAESSSRVDLLAARAEQKRAERDYA 295

Query: 284 EKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQH 341
            +   +  + +   G  +  +    +    Q  + LM+I  P      I   +       
Sbjct: 296 RELLNRSEVRAERDGIAVFADAERWTGKPVQTGERLMEIADPSQAELRIE--LAVGDAIS 353

Query: 342 VKKGYTATVRFPH 354
           ++ G    +    
Sbjct: 354 LEPGAEVALFLDS 366


>gi|320174426|gb|EFW49570.1| Inner membrane component of tripartite multidrug resistance system
           [Shigella dysenteriae CDC 74-1112]
          Length = 269

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 86/244 (35%), Gaps = 24/244 (9%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     + +          ++++ + + +    + +       +       RA       
Sbjct: 2   LFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVNATVEKARAAAKQATD 61

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   + L ++  VS  D+++       +  +L   + + ++    ++ +          
Sbjct: 62  TLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAASAVSGV---------- 111

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                  D+   QR   +    LT L    E  T+ +P  G ++  ++ S   +A   +P
Sbjct: 112 -------DVLVAQRAAVEADIALTKL--HLEMATVRAPFDGRVISLKT-SVGQFASAMRP 161

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           +  ++  ++  Y+ A      +++++ G  AT+R         K F+  ++ I   +   
Sbjct: 162 IFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS---DSGKTFEGKVDSIGYGVLPN 217

Query: 378 DNNL 381
           D  L
Sbjct: 218 DGGL 221


>gi|254564118|ref|YP_003071213.1| efflux pump component [Methylobacterium extorquens DM4]
 gi|254271396|emb|CAX27409.1| putative efflux pump component [Methylobacterium extorquens DM4]
          Length = 359

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 26/202 (12%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR----------TFADEMSKLTILE 284
            E     R  +    EA       L  +S  +E+ Q+                S+L+  +
Sbjct: 130 AEAAIKNREADLSVKEAQSARRAALSTVSTSVEEKQQFAGTAKIAEAALETARSQLSQAK 189

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           K  E+  + S + G +         +YAQ      +++  +   ++       ++ H+  
Sbjct: 190 KNLERTQVRSTVNGRVTNLLLR-VGDYAQTGTANARVI-DTDSFWVDGYFEETKMAHIHV 247

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEYYE---------VILKI 393
           G  A +    Y    +   +++   I      +           Y          V ++I
Sbjct: 248 GAPAEMALMGYGASLKGTVESLTLGISTANAATSTQGLPNVDPVYTWVRLAQRVPVRIRI 307

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
             +      + L  G  A V+ 
Sbjct: 308 DHV---PPEVTLVAGMTATVVV 326



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 5/124 (4%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +     VV I    +G I + +V +  ++ +G  L   +  +  + +   + +IKN 
Sbjct: 80  DGRVRV--QVVNIAPQVAGTIVELRVTDNQEVKKGDVLYVIDPFDYQEAVVSAEAAIKNR 137

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              +  +++          V   +    E+Q      K      +     +S   ++L+ 
Sbjct: 138 EADLSVKEAQSARRAALSTV---STSVEEKQQFAGTAKIAEAALETARSQLSQAKKNLER 194

Query: 167 KLTR 170
              R
Sbjct: 195 TQVR 198


>gi|226330030|ref|ZP_03805548.1| hypothetical protein PROPEN_03943 [Proteus penneri ATCC 35198]
 gi|225200825|gb|EEG83179.1| hypothetical protein PROPEN_03943 [Proteus penneri ATCC 35198]
          Length = 278

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/275 (10%), Positives = 76/275 (27%), Gaps = 19/275 (6%)

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +            ++    S+    + +      +L  +       A L + QK L   +
Sbjct: 4   RTLKEQLHEVQAQLNQAKSSVVTAQSALSQRKSEQLAAQAVVRQRIAELDAAQKRLNRSR 63

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L + NA+S   L+        +   +     ++   +  I      A         ++ 
Sbjct: 64  ALVKTNAISIQQLDDDIARTEGARAAVEAAKAQETATIAAIES----AKAGIIQANTKVD 119

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
                 +R  A+            +   + +P  G + Y +             ++ +V 
Sbjct: 120 AATATERRILAE-----------LDDSILKAPRNGRVQY-RVAEPGEVLGAGGRVLNMVD 167

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNL 381
            S   Y+   +  +       G    +       I        +  +     +  + +N 
Sbjct: 168 LSD-VYMTFFLPTEAAGKAALGSDVHIILDAAPHIVIPAKTTYVASVAQFTPKTVETDNE 226

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           + +  + V  +I+      +   ++ G P      
Sbjct: 227 RLKLMFRVRARISPELLEKHLEYVKTGLPGRAYIR 261


>gi|323701474|ref|ZP_08113147.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           nigrificans DSM 574]
 gi|323533483|gb|EGB23349.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           nigrificans DSM 574]
          Length = 368

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 68/180 (37%), Gaps = 5/180 (2%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           + PI   ++ +G +   +N   I +   G I    V+ G ++ +G  L   +D E    +
Sbjct: 51  MGPISADLTYTGTV-VSNNDSVISAKIMGRITSLPVKEGDRVKKGDILAVIDDSEYKGKV 109

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  +  +     +       LD    KY+ L +A    E+  L +  +     S++    
Sbjct: 110 NTLRQRVNTAELNYKF----LDQQLGKYEQLFQAQAISEQNYLQYKLQRDVAASQLEEAK 165

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +     + ++ T +++ +   ++         A+       L+    L  +  V++ DL
Sbjct: 166 FALREVEVALENTYIKAPFDGVVNSLQSQLGDMAVAGKPILILSDTSKLKAQVRVTETDL 225



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 67/187 (35%), Gaps = 24/187 (12%)

Query: 239 NMLRHINELYDEANLEFANYLK-EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
             L    +L+    +   NYL+ ++ RD+  +Q    +    L  +E   E   I +P  
Sbjct: 128 QQLGKYEQLFQAQAISEQNYLQYKLQRDVAASQ--LEEAKFALREVEVALENTYIKAPFD 185

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +   QS    + A   +P++ I+  +     + +VT   ++ +K+     +  P    
Sbjct: 186 GVVNSLQS-QLGDMAVAGKPIL-ILSDTSKLKAQVRVTETDLEMIKENMEVVLISPLLPQ 243

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                 K+ + KI P    Q +         V + I           L+ G   +V F  
Sbjct: 244 S----LKSKVAKIFPSAEPQTHTT------IVEIPIP-------GAMLKPGTSVDVSFLT 286

Query: 418 K--NTTL 422
                TL
Sbjct: 287 GNKEKTL 293


>gi|163844635|ref|YP_001622290.1| hypothetical protein BSUIS_B0472 [Brucella suis ATCC 23445]
 gi|163675358|gb|ABY39468.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 349

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 64/413 (15%), Positives = 122/413 (29%), Gaps = 86/413 (20%)

Query: 19  RMTLLSIIGIIG--LITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           R     +IG++G  +I W+  L P + SV ++        V  +    SG I K  V + 
Sbjct: 9   RGGFAILIGLLGVFIILWAWQLPPFKHSVETTDNAYVRGQVTVMSPQVSGYITKVNVTDY 68

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            Q+ +G  L   +           +  +      +D++K+AL          E   ++RE
Sbjct: 69  EQVKKGDLLFEIDS-------RSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKARE 121

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q+           +K     + ++        +   + + N L  +       A L+  
Sbjct: 122 AQISGAKAALE--VAKANTVRVDALLPRGVTTQSSADTAHGNMLQAQAAVDQAEAALAVA 179

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++DL  +                   IV +  L    +  E    L  I+    +     
Sbjct: 180 KEDLRTI-------------------IVAREGLNADLHNAEAAVALARIDLQNTKILAPR 220

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L E+   L                                            Y    
Sbjct: 221 DGKLGEVGVRL------------------------------------------GQYVTAG 238

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+ +VP  K  +I A     Q+  +K G   T+        R  + K  IE   P   
Sbjct: 239 TQLVSLVPAVK--WIMANFKETQLYGMKVGQPVTLTVDAL---RHAELKGHIEAFSPATG 293

Query: 376 QQ----DNNLQTQEYYEVI----LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +     ++  T  + ++     ++I+      +   L  G    +     +T
Sbjct: 294 SEFSVIKSDNATGNFTKITQRLSVRISIDEGQPDAELLAPGMSVVLRVDTAST 346


>gi|88860908|ref|ZP_01135544.1| multidrug resistance efflux pump [Pseudoalteromonas tunicata D2]
 gi|88817121|gb|EAR26940.1| multidrug resistance efflux pump [Pseudoalteromonas tunicata D2]
          Length = 340

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 92/269 (34%), Gaps = 31/269 (11%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             S+   + +LE     L  L    QK    +     +  +  +   ++  I+ +S  E 
Sbjct: 86  QDSLIDKQGELERAQKSLENLQQQEQKTEQELILAVAEKQMQFDKTKRKAEIIDQSRSEN 145

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                +    +   +    +  L F    +E++  L+ +Q   A   +++  LE   E+ 
Sbjct: 146 DRKKAQIDFTIAQNDLFLAKQKLTFQLETRELN--LKMSQGKVARLQNEVADLEADVEKL 203

Query: 291 TILSPIAGTIVYNQSF-----SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
            + +PI G ++Y  ++     S     Q  Q ++  V      ++ A++       +K G
Sbjct: 204 KVKAPIDGVVIYQTNYEGEKSSVGESVQFGQAVLA-VAVLDQMHVLAQIDEPDSGKIKIG 262

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE- 404
               V          +     I+ +  +  ++    +         +I D   S + ++ 
Sbjct: 263 QAVKVTL---DGSSAQVVNGKIQSLGGVFREKSWQDKR--------RIIDAMISLDTVDT 311

Query: 405 --LRNGFPA--EVLF-------TAKNTTL 422
             +R G  A  EV           +  TL
Sbjct: 312 AVMRPGMSARIEVDIATPVIAAKTEERTL 340



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 94/289 (32%), Gaps = 35/289 (12%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           KF V   SQ+  G  ++ F+D +  D +  K+  ++  +  ++             ++ +
Sbjct: 62  KFMVPENSQVKAGQVVIKFDDKQIQDSLIDKQGELERAQKSLE-------------NLQQ 108

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +  ++ +E +L    K            I    RS   +        + + DL      L
Sbjct: 109 QEQKTEQELILAVAEKQMQFDKTKRKAEIIDQSRSENDRKKAQIDFTIAQNDLFLAKQKL 168

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN-----IHEQKNMLRH 243
              L + + +L M +    K A  QN++   E  V K  ++   +         +     
Sbjct: 169 TFQLETRELNLKMSQG---KVARLQNEVADLEADVEKLKVKAPIDGVVIYQTNYEGEKSS 225

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           + E         A  + +    L Q     + ++     ++ T +        +  +V  
Sbjct: 226 VGESVQFGQAVLAVAVLDQMHVLAQIDEPDSGKIKIGQAVKVTLDGS------SAQVVNG 279

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT--PKQIQHVKKGYTATV 350
           +  S     +      +     K   I A ++        ++ G +A +
Sbjct: 280 KIQSLGGVFR------EKSWQDKRRIIDAMISLDTVDTAVMRPGMSARI 322


>gi|332836507|ref|XP_003313091.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase
            beta-3 isoform 1 [Pan troglodytes]
          Length = 1234

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 82/207 (39%), Gaps = 8/207 (3%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              T  L+D    +    RC +     AL    +  D  E   E++  Q  +F  +   + 
Sbjct: 987  TLTRRLLDGLAQAQAEGRCRL--RPGALGGAADVEDTKEGEDEAKRYQ--EFQNRQVQSL 1042

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK- 208
             ++    + +  +     L R     L  + L+  ++  + L   ++++   ++ + ++ 
Sbjct: 1043 LELREAQVDAEAQRRLEHL-RQALQRLREVVLDANTTQFKRLKEMNEREKKELQKILDRK 1101

Query: 209  --NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              N++S+  +  + +   + T   R +I E  N +R + E   + +       +++ + L
Sbjct: 1102 RHNSISEAKMRDKHKKEAELTEINRRHITESVNSIRRLEEAQKQRHDRLVAGQQQVLQQL 1161

Query: 267  EQNQRTFADEMSKLTILEKTREQKTIL 293
             + +     ++++    ++ R  + I 
Sbjct: 1162 AEEEPKLLAQLAQECQEQRARLPQEIR 1188


>gi|310640754|ref|YP_003945512.1| protein [Paenibacillus polymyxa SC2]
 gi|309245704|gb|ADO55271.1| Putative uncharacterized protein [Paenibacillus polymyxa SC2]
          Length = 454

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 82/253 (32%), Gaps = 22/253 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL----DFL 120
           G I +  V  G ++ +G  L   E  E  D +   + ++   + ++   K+++      +
Sbjct: 59  GRIDQMLVNEGDKVKKGQVLAHLESRELEDKVKQAQAALLAAKSNVSKAKASVLQAQAGV 118

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                 +  A   + +          ++ S++     +S     K+   +  +       
Sbjct: 119 GQAQATVSAAQAKKSQGTTAVSVTAEASSSQIEQAKAASNAAKAKLDALKSGARPQELEQ 178

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ---------------ERIVYK 225
           L+    + +  L    K+L   K L E  A +Q  L+Q                +++   
Sbjct: 179 LQASVKVAKETLDLTVKNLERAKKLQEAGAATQASLDQATLEHQQAVAKYNAESQKLDMA 238

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
                +E I   +   R       EA         +   D++  Q +     S +   + 
Sbjct: 239 REGSRKEEITAAEAQYRQALAAVKEAQAGAGKVAVQ-QEDVKAAQASVEQAQSAVKAAQS 297

Query: 286 TREQKTILSPIAG 298
           T EQ    S + G
Sbjct: 298 TVEQAQ--SAVEG 308


>gi|187930861|ref|YP_001901347.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii
           12J]
 gi|187728905|gb|ACD30068.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii
           12J]
          Length = 384

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 73/243 (30%), Gaps = 27/243 (11%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL--ELRENIHEQKNMLR 242
              +R   +     +   K LF+   +   DL Q E  +  +    +L  +   +   L 
Sbjct: 81  QGKIRNTYAKVGDTVAKGKPLFD---IESPDLVQAESTLISTAGTRKLTTDALARARQLY 137

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFA------DEMSKLTILEKTREQKTILSPI 296
            I  L  +   +  +  +      +  +   A       +M ++    KT    T++SPI
Sbjct: 138 EIQGLAQKDLDQAISDQQAAEAAYKAAREALAVFGKTPAQMDQIVQTRKTDSLLTVVSPI 197

Query: 297 AGTIVYNQSFSSSNYAQQS-QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           +G +   +S       Q         V      +++A V    +  +  G    +    +
Sbjct: 198 SGQVTA-RSAQPGLLLQPGNGTAPFTVADVSTMWMQAFVPEADVPLLHVGQPVKIHVMAF 256

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                  F   I  +   +    + +       V  +I D        ELR G       
Sbjct: 257 PGR---VFNGKITTVGASVDANTHRI------LVRSEIDDP-----KHELRPGMFTSFDI 302

Query: 416 TAK 418
           T  
Sbjct: 303 TTG 305


>gi|302336149|ref|YP_003801356.1| efflux transporter, RND family, MFP subunit [Olsenella uli DSM
           7084]
 gi|301319989|gb|ADK68476.1| efflux transporter, RND family, MFP subunit [Olsenella uli DSM
           7084]
          Length = 500

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 19/177 (10%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA--------Q 313
               LE  Q T             T  ++T+ +PI+G++V   + + ++ A         
Sbjct: 251 AQSSLEAAQVTLQGAREAYDEAVATAGKRTVKAPISGSVVAVGAVAGASTASSAAPSQQG 310

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
            + PL++I        + A+V    I  +    TATV F            A I  I  +
Sbjct: 311 SNTPLVQIA-DVSQMTVTAQVNEVDISKLAVDQTATVTFSALPGTT---MDARITHIATV 366

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
            +           Y V     +L   + +  L+ G  A      ++ T    +I P+
Sbjct: 367 ATSGAEGGAGVVTYSV-----ELLIPNPDPSLKPGMTASATIVTQSVT--DALIAPV 416



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 2/146 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  SVS+SG+     +   +     GII+  QV  G+ +  G  L T  +      +   
Sbjct: 136 LTSSVSASGKAEPISST-VVTPEVDGIIENLQVAEGTTVNAGDVLFTLRNDSLDKAVREA 194

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              +++    +   +++LD   + Y+    A+ S  +           T         SS
Sbjct: 195 SQQVRSAEVGVSGAQASLDSARSNYNTALNAWNSAPDGETQATLTDPDTLYDAVVSAQSS 254

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKS 185
           +  +    L   R  Y   +    K 
Sbjct: 255 LEAAQVT-LQGAREAYDEAVATAGKR 279


>gi|170737550|ref|YP_001778810.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
 gi|169819738|gb|ACA94320.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           MC0-3]
          Length = 396

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 4/101 (3%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 ++  +  +  ++ TI++P+ GTI   +S           PLM IV      ++ 
Sbjct: 204 AVVQAAAQFKLAYRNLKRTTIVAPVDGTI-GQRSVQVGQQVGPGVPLMSIV-QLNRLWVE 261

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           A     QI+H++ G    V    Y       ++  ++    
Sbjct: 262 ANFKEGQIRHMRVGQPVEVVSDLYGSRI--AYRGRVQGFSA 300



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 50/144 (34%), Gaps = 8/144 (5%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L        KR T+   I ++  I W +  L  +     + +     ++V++ +   G 
Sbjct: 19  ALDARRATRRKRFTVFFAIVLLAAIAWIAYWLLSDRYYEDTDDAYVAGSIVQVAAQIPGA 78

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETT-------DLIDLKKVSIKNLRCHIDTEKSALDF 119
           +    V +   +  G PL+  +D E +         +      + N R        A++ 
Sbjct: 79  VTDVVVADTQAVRAGQPLVRLDDTEASVAFAQAKAQLAQAVRQVANARISNTMYVEAVNA 138

Query: 120 LNNKYDVLEKAFESREEQLLDFLG 143
                 + ++A  +R    ++ + 
Sbjct: 139 RRADLSLAQRALAARSGASVEIVA 162


>gi|90021575|ref|YP_527402.1| hypothetical protein Sde_1930 [Saccharophagus degradans 2-40]
 gi|89951175|gb|ABD81190.1| secretion protein HlyD [Saccharophagus degradans 2-40]
          Length = 629

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 60/184 (32%), Gaps = 20/184 (10%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           E  N    +       N       ++  R L+  +    + +++L   +  ++  T  +P
Sbjct: 164 ELVNAQEELLLAISRNNTRLIQAAEDRLRALQIPR----EFINQLKKTKTVQQTVTFFAP 219

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G +          Y Q    ++ I       ++ A++  +Q   V+     T+     
Sbjct: 220 QGGVVDNLNIR-EGFYVQPGTTMLSIGALD-PIWVEAEIFERQAALVEINDPVTMTL--- 274

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  + +   ++ + P +  +           V L++    F +    L+    A++  
Sbjct: 275 DYLPGRTWTGRVDYVYPTLDSKTRT--------VRLRL---RFDNPKELLKPNMFAQITV 323

Query: 416 TAKN 419
              +
Sbjct: 324 HTGS 327



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 41/102 (40%), Gaps = 3/102 (2%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPF-SGIIKKFQVEN-GSQILQGTPLLTFEDIETTDLI 96
            +   + + G +  ++N +    P  SG ++K  V++ G  + +G PL      E  +  
Sbjct: 110 RLHSEIVTVGYVRYDENKLIHIHPRLSGWVEKLYVKSAGDPVKKGEPLYALYSPELVNAQ 169

Query: 97  DLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREEQ 137
           +   ++I      +    +  L  L    + + +  +++  Q
Sbjct: 170 EELLLAISRNNTRLIQAAEDRLRALQIPREFINQLKKTKTVQ 211


>gi|306841378|ref|ZP_07474081.1| efflux transporter, RND family, MFP subunit [Brucella sp. BO2]
 gi|306288563|gb|EFM59912.1| efflux transporter, RND family, MFP subunit [Brucella sp. BO2]
          Length = 408

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 15/210 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q D  + + +   + L L++    ++  L     +      +    L     +++    
Sbjct: 127 AQLDNLKAQLLSKDAQLTLKKLNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNA 186

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
               + ++L   +      +I SP+ GT+V   +          Q    IV  + L    
Sbjct: 187 QIRQQEAQLASDKVDLGYTSIYSPMEGTVVDEAA-KEGETLNAVQSAPTIVTVADLKVMT 245

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A+V+   I  +K G      F        K+F   + +I P  +  +N +    YY +
Sbjct: 246 VEAQVSEADISKLKPGMPVY--FTLLGQPD-KRFTGTLRQIKPTPATDNNVVL---YYAL 299

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                     +   EL     A+V F    
Sbjct: 300 F------DVPNPTGELMIDMSAQVYFVLGE 323



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 67/193 (34%), Gaps = 29/193 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW-------------SILLP------IEISVSSS 47
            + ++      +    L    II    W             S L        IE ++++ 
Sbjct: 15  ASARKRAKGKRRWWLWLPAAAIIIGAGWYFYGSYKADGEKSSYLAETVTRGDIENAITAV 74

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G + +    V + +  SG +K  +VE G  + QG  +   +       +++    + NL+
Sbjct: 75  GTL-SALRSVNVGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIAGAQLDNLK 133

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             + ++ + L         L+K   +R++ LL   G   +T  +  N  +      +K  
Sbjct: 134 AQLLSKDAQL--------TLKKLNAARQKSLLATRGVSQATVDQA-NADLLMAEAEVKAL 184

Query: 168 LTRMRSIYLNRLD 180
             ++R        
Sbjct: 185 NAQIRQQEAQLAS 197


>gi|256847359|ref|ZP_05552805.1| chromosome segregation protein SMC [Lactobacillus coleohominis
           101-4-CHN]
 gi|256716023|gb|EEU30998.1| chromosome segregation protein SMC [Lactobacillus coleohominis
           101-4-CHN]
          Length = 1189

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 81/201 (40%), Gaps = 9/201 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           ++    + ++     L+  ++  ++ L+ L  +    E     R +Q + F  +  +   
Sbjct: 716 QSEAQFNEQRQVTDRLQTTVEVTENHLNELQRRVQAFEFQANQRNDQQVSFTNQQQANEE 775

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K      + + + L     +++       +LE+ +S    ++   +++  + K    + A
Sbjct: 776 KT-----ADLNQQLTDAKDQVQQTKKQIAELESNASSQDEVIHQLEQEQAVAKERQRQLA 830

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              ++L++Q+  V +        I +Q N L         +  +    L++    L++ +
Sbjct: 831 NQHDELSRQQTDVQQQLA----TIEQQLNELAQGAANDQTSTQDQETALQQAQVVLKKAR 886

Query: 271 RTFADEMSKLTILEKTREQKT 291
           +T +D   + T LE+  +Q T
Sbjct: 887 QTVSDCNDRQTALEEKIDQAT 907



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 87/252 (34%), Gaps = 38/252 (15%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY----DVLEKAF 131
             + Q   L  F+  +T   +   +  + ++R  +          + +     D L+K  
Sbjct: 214 DYLEQKQKLDQFDRTQTVRQVLRDQAELTSIRKKLGQSNQMSAQYDQQTKKAKDTLQKLQ 273

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR------------------- 172
           E+R + L       +   +KV         +SL       R                   
Sbjct: 274 ENRRQVLQQKDQAQNEVTAKVEEIAKLQNQQSLSSIRQEQRLKDQQRLTSQKQELKERQE 333

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS------------QNDLNQQE 220
            +       E++++ L++ LS+ +K L  +++L     V             Q DL QQ 
Sbjct: 334 QLTQQLAQNEHQAAELKSKLSTERKKLKDLRSLSAAERVQRLNQELEQLQERQVDLMQQL 393

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI---SRDLEQNQRTFADEM 277
             ++   + L++N     N+++   +   E   + +   +++    ++L + Q       
Sbjct: 394 TTLHNERVYLKQNHERNLNVVKQDQQNLVEGRQQLSTARQQLAAQQKELAEAQTKLTRAE 453

Query: 278 SKLTILEKTREQ 289
            +L    + R+Q
Sbjct: 454 RELKAANQHRQQ 465



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 25/208 (12%), Positives = 67/208 (32%), Gaps = 13/208 (6%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           ++T +         +   + ++ R  + ++K  L  L       ++   + EEQ+     
Sbjct: 646 VITLDGQLINASGAMTGGANRHQRVGLLSQKQQLTKLKADLQQEQQNASALEEQVQKLTT 705

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +                 + +    R +      L+    +    L+  Q+ +   +
Sbjct: 706 ARQANQ---------QTIEQSEAQFNEQRQVTDR---LQTTVEVTENHLNELQRRVQAFE 753

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
               +    Q     Q++   + T +L + + + K+ ++   +   E     A+   E+ 
Sbjct: 754 FQANQRNDQQVSFTNQQQANEEKTADLNQQLTDAKDQVQQTKKQIAELESN-ASSQDEVI 812

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
             LEQ Q    +   +L        ++ 
Sbjct: 813 HQLEQEQAVAKERQRQLANQHDELSRQQ 840



 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 55/147 (37%), Gaps = 12/147 (8%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +    ++  + L+    R+  +    ++LE +   L+   S  Q  L   + L       
Sbjct: 170 YKQNKTTAEKKLQETAERLDRVNDIVVELERRLEPLKEESSLAQDYLEQKQKL------D 223

Query: 213 QNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEAN---LEFANYLKEISRDL 266
           Q D  Q  R V +   EL   R+ + +   M    ++   +A     +     +++ +  
Sbjct: 224 QFDRTQTVRQVLRDQAELTSIRKKLGQSNQMSAQYDQQTKKAKDTLQKLQENRRQVLQQK 283

Query: 267 EQNQRTFADEMSKLTILEKTREQKTIL 293
           +Q Q     ++ ++  L+  +   +I 
Sbjct: 284 DQAQNEVTAKVEEIAKLQNQQSLSSIR 310


>gi|240118506|ref|ZP_04732568.1| putative ABC transporter, periplasmic protein [Neisseria
           gonorrhoeae PID1]
 gi|268604215|ref|ZP_06138382.1| periplasmic protein [Neisseria gonorrhoeae PID1]
 gi|268588346|gb|EEZ53022.1| periplasmic protein [Neisseria gonorrhoeae PID1]
          Length = 392

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ +D++
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLDME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 83/257 (32%), Gaps = 26/257 (10%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               +++ +Y+       K  L+  + S+ Q +   M+        S+ +  Q + +  +
Sbjct: 64  QASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLDMEK-------SKLETYQAKLVSAQ 116

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             L   E  ++++  L   +    E      + L     ++ + +         +   E 
Sbjct: 117 IALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELKALIRQSKISINTAES 176

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVK 343
                 I + + GT+V             +Q    IV  +   +   + ++    I  VK
Sbjct: 177 DLGYTRITATMDGTVVSIPV-EEGQTVNAAQSAPTIVQLANLDMMLNKMQIAEGDITKVK 235

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVILKITD 395
            G    + F   ++      KA ++ +DP ++           +      YY     +  
Sbjct: 236 AGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYARSFVP- 291

Query: 396 LAFSDNNIELRNGFPAE 412
               + + +L  G   +
Sbjct: 292 ----NPDGKLATGMTTQ 304


>gi|217978838|ref|YP_002362985.1| secretion protein HlyD family protein [Methylocella silvestris BL2]
 gi|217504214|gb|ACK51623.1| secretion protein HlyD family protein [Methylocella silvestris BL2]
          Length = 333

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 62/212 (29%), Gaps = 19/212 (8%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +TE      +N +   +      R  +        +           ++   +   +   
Sbjct: 45  ETEIRIAPEINGRLAEMRVVAGQRVAKGDLLASLSNPELEASVVEAKAAAANARAERNNV 104

Query: 171 MRSIYLNRLDLENK-SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
              +   ++D+  +   +  A L+  Q+    ++ L  K+  +Q   ++    V K+   
Sbjct: 105 YSGVRKEQVDIAAEGVRIAEANLTLAQQQFARLQALASKDYATQQKFDEGAAEVKKAQAA 164

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L                      +   +     + +            + L  LE    +
Sbjct: 165 L-----------------VLRRAIYARDTAGPTAEERASADAKVRLAEASLADLEAKLSK 207

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            TI +P+ GT+      +        QP+M +
Sbjct: 208 TTIRAPVDGTV-RLLVGTPGEVIAPGQPIMTL 238


>gi|153833388|ref|ZP_01986055.1| multidrug resistance efflux pump [Vibrio harveyi HY01]
 gi|148870397|gb|EDL69323.1| multidrug resistance efflux pump [Vibrio harveyi HY01]
          Length = 354

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 81/262 (30%), Gaps = 30/262 (11%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +   +     SL+    +  ++Y  R       +  +A  ++   + + ++ L ++  
Sbjct: 78  RKYKIALEQAQLSLQSAYEKEATLYSQREAALANIARAQATYNNAHSEYSRLQKLSKQKV 137

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +SQ++L+        S   L+      K +   + +   ++                   
Sbjct: 138 ISQSNLDSAYAQNQVSRAALKAEQQNLKVIEAQLGDKKGQSTAVRIAQ------------ 185

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  + +   +       +L+P  G +   Q       A  + PL+  VP     ++
Sbjct: 186 -------NGIEKAQLDLTNTAVLAPSDGVVTNLQL-EVGTMANTNMPLLTFVPTGS-MWV 236

Query: 331 RAKVTPKQIQHVKKGYTATVRFPH-----YAD----IREKKFKAIIEKIDPIISQQDNNL 381
            A    K +  V K Y A V F       Y             A       +   + NN 
Sbjct: 237 AADFREKSVAGVSKDYHAMVAFDANPGSVYDFDLASRDYGVAAAQQTPNGALTKVEVNNR 296

Query: 382 QTQEYYEVILKITDLAFSDNNI 403
             ++     + +T      +++
Sbjct: 297 WVRDAQRTRVNLTSEEALPSSL 318



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 69/209 (33%), Gaps = 15/209 (7%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           ++ + +L I+    +I      PI    ++ G +  +  VV++    SG +    +EN  
Sbjct: 11  MRTLIVLFIVLFFYIIIADRHAPI----TTEGRV--QGYVVQVAPEVSGKVTDVLIENNQ 64

Query: 77  QILQGTPLLTFEDIET-----TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            + +G  L   +D +         + L+    K    +   E +  +    +        
Sbjct: 65  AVHKGDVLFKIDDRKYKIALEQAQLSLQSAYEKEATLYSQREAALANIARAQATYNNAHS 124

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA- 190
           E    Q L        +              +LK +   ++ I     D + +S+ +R  
Sbjct: 125 EYSRLQKLSKQKVISQSNLDSAYAQNQVSRAALKAEQQNLKVIEAQLGDKKGQSTAVRIA 184

Query: 191 --LLSSHQKDLTMMKNLF-EKNAVSQNDL 216
              +   Q DLT    L      V+   L
Sbjct: 185 QNGIEKAQLDLTNTAVLAPSDGVVTNLQL 213


>gi|107025634|ref|YP_623145.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116693184|ref|YP_838717.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           HI2424]
 gi|105895008|gb|ABF78172.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116651184|gb|ABK11824.1| secretion protein HlyD family protein [Burkholderia cenocepacia
           HI2424]
          Length = 396

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 4/101 (3%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 ++  +  +  ++ TI++P+ GTI   +S           PLM IV      ++ 
Sbjct: 204 AVVQAAAQFKLAYRNLKRTTIVAPVDGTI-GQRSVQVGQQVGPGVPLMSIV-QLNRLWVE 261

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           A     QI+H++ G    V    Y       ++  ++    
Sbjct: 262 ANFKEGQIRHMRVGQPVEVVSDLYGSRI--AYRGRVQGFSA 300



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 8/144 (5%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
            L        KR T+   I ++  I W +  L  +     + +     ++V++ +   G 
Sbjct: 19  ALDARRATRRKRFTVFFAIVLLAAIAWIAYWLLSDRYYEDTDDAYVAGSIVQVAAQIPGA 78

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETT-------DLIDLKKVSIKNLRCHIDTEKSALDF 119
           +    V +   +  G  L+  +D E +         +      + N R        A++ 
Sbjct: 79  VTDVVVADTQAVRAGQTLVRLDDTEASVAFAQAKAQLAQAVRQVANARISNTMYVEAVNA 138

Query: 120 LNNKYDVLEKAFESREEQLLDFLG 143
                 + ++A  +R    ++ + 
Sbjct: 139 RRADLSLAQRALAARSGASVEIVA 162


>gi|323169204|gb|EFZ54880.1| hypothetical protein SS53G_0372 [Shigella sonnei 53G]
          Length = 285

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 59  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 117

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 118 AEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSGRVTNLTTR-IGDYADTG 176

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 177 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 227

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 228 RAIYDQS 234



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 13/177 (7%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              + D      ++ +  +         T  ++    I +        LT     Y 
Sbjct: 117 SAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSGRVTNLTTRIGDYA 173


>gi|315290575|gb|EFU49949.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           153-1]
          Length = 285

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 23/209 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K    +  ++       +  N+ +   V+  DL            EL     +     
Sbjct: 37  DGKIRAEQVSITPQVSGRIIELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQ 95

Query: 242 RHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +  +EAN           A  L   + +++  Q +     + L   +    Q  I 
Sbjct: 96  SDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIR 155

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTAT 349
           +P++G +    +    +YA   +PL  +V       I      K+      H+++G  A 
Sbjct: 156 APVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQ 209

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +          K  +  +  I   I  Q 
Sbjct: 210 ITL----YSDNKTLQGHVSSIGRAIYDQS 234



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWGLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRII 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 156


>gi|308173400|ref|YP_003920105.1| efflux permease [Bacillus amyloliquefaciens DSM 7]
 gi|307606264|emb|CBI42635.1| putative efflux permease [Bacillus amyloliquefaciens DSM 7]
 gi|328553670|gb|AEB24162.1| efflux permease [Bacillus amyloliquefaciens TA208]
 gi|328911484|gb|AEB63080.1| putative efflux permease [Bacillus amyloliquefaciens LL3]
          Length = 378

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 56/150 (37%), Gaps = 13/150 (8%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I  SV   G +              G + K +V+ G ++ +G+ L+T+ + +     + 
Sbjct: 46  KISSSVMVPGTLKFSKEQYVFYEADKGTLDKVKVKEGDKVKEGSSLVTYTNEQLNLDKEQ 105

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +++ ++ R  I+  +  L  LN+K   L K     E Q             K      +
Sbjct: 106 NELTEQSKRLQIEQIEEKLRALNSKEKDLAKQVGEAEAQ-------------KQIESERT 152

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            +    K     ++   L +  LEN+ + L
Sbjct: 153 DLQLQQKTAEIELKQSDLQKQSLENQVANL 182



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 79/202 (39%), Gaps = 14/202 (6%)

Query: 213 QNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           QN+L +Q + +    +E  LR    ++K++ + + E   +  +E      ++ +   + +
Sbjct: 105 QNELTEQSKRLQIEQIEEKLRALNSKEKDLAKQVGEAEAQKQIESERTDLQLQQKTAEIE 164

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTI--VYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
              +D   +   LE      T+ S + GT+  V  ++ S  +  Q  +P++ I    +  
Sbjct: 165 LKQSDLQKQ--SLENQVANLTVKSEMDGTVISVNQEAASKKSDIQ--EPVIHIG-DPEHL 219

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI----DPIISQQDNNLQTQ 384
            +   ++      VKKG + T+      D   K   A +  +        S  +     Q
Sbjct: 220 IVAGNLSEYDTLKVKKGQSVTITSDAIPDKTWKGRVAAVGLVPEQKSGAASGGNTEQAVQ 279

Query: 385 EYYEVILKITDLAFSDNNIELR 406
             ++V L I +L       +L 
Sbjct: 280 YPFQVKL-IGNLPEGKPGFKLI 300


>gi|297617698|ref|YP_003702857.1| efflux transporter RND family, MFP subunit [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145535|gb|ADI02292.1| efflux transporter, RND family, MFP subunit [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 411

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 76/213 (35%), Gaps = 14/213 (6%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITW-------SILLPIEIS-----VSSSGEILNEDNVV 57
            R+  + + +  L+++ G IGL++W         +  +E       V +SGEI   + + 
Sbjct: 3   PRHKLSKIPKWLLVAMAGFIGLVSWYNLRAIPVTVAQLEKRTITSEVKASGEIEPVEKL- 61

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            + S  SG ++   VE GS + +G  L + +  E      + +   + L   +   ++ +
Sbjct: 62  ILTSKTSGKVETVAVEAGSMVKKGQVLASLDTTELKLETAIAEARYQALVAQLAGIQA-V 120

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +    +  + +     +  +      +       +    + +   SL+   T +      
Sbjct: 121 EPAKAEAALTKAKAALQSAERQYERAQLLFEAGAISKSDLETYELSLEEARTAVTIAEQE 180

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
              +++        LS   K+     +L     
Sbjct: 181 AKKVQSPGGYEIKTLSFQVKEALANLDLARSRL 213



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 104/281 (37%), Gaps = 30/281 (10%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             L    +T  K+      + Y++L  +L  ++++       E   +  +A L S ++  
Sbjct: 86  QVLASLDTTELKLETAIAEARYQALVAQLAGIQAV--EPAKAEAALTKAKAALQSAERQY 143

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              + LFE  A+S++DL   E  + ++   +   I EQ+         Y+   L F    
Sbjct: 144 ERAQLLFEAGAISKSDLETYELSLEEARTAV--TIAEQEAKKVQSPGGYEIKTLSF---- 197

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                          + ++ L +     +Q  I +P    + Y +     +Y      L 
Sbjct: 198 ------------QVKEALANLDLARSRLQQAVITAPFDSRVYY-RYVDPGSYVNPGTALF 244

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +    +   +++ +  ++   VK+G  A +  P   D         +  + P   +  +
Sbjct: 245 MLG-REQEMVVKSYILEEEAPGVKQGQEARMSGPVLGDS---VLYGHVVYVAPAAEKVVS 300

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +L  ++  +V++KI      +++  L+ GF  ++       
Sbjct: 301 SLGVEQ-TKVMVKI----LPNDSSRLKPGFKLDLAIITAKK 336


>gi|317051038|ref|YP_004112154.1| RND family efflux transporter MFP subunit [Desulfurispirillum
           indicum S5]
 gi|316946122|gb|ADU65598.1| efflux transporter, RND family, MFP subunit [Desulfurispirillum
           indicum S5]
          Length = 357

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 69/201 (34%), Gaps = 20/201 (9%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +D+  Q  +  ++  +      E+        E     NL       +    LE+ +   
Sbjct: 89  SDILGQRLLAARAQADELRVQIERARQNFKRAENLFRQNLSSQQAYDDAHYALEELKFRL 148

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
             +   L  LE     K IL+P  G ++  +   +  +     P++ +  H  +  I   
Sbjct: 149 VAQEHNLRALELELAHKRILAPFDGVVLQ-RLAEAGEWVMPGAPVVNLAAHGSMQVI-VN 206

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V+   +  ++ G    +R      ++EK    +++ + P              + V +++
Sbjct: 207 VSQADVDVIQVGKPVQIR------VQEKLHAGVVDAVIPQADIATRT------FPVKVRV 254

Query: 394 TDLAFSDNNIELRNGFPAEVL 414
                     +L  G  A+V+
Sbjct: 255 EHSG------QLMEGMRAQVM 269



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 59/177 (33%), Gaps = 13/177 (7%)

Query: 16  SLKRMTLLSIIGIIGLITWSIL----LPIEISVSSSGEI---------LNEDNVVEIKSP 62
           ++ R+ +L ++       W+       P+E+     G +         +  D    + S 
Sbjct: 3   TIARLMVLCLMLAGAEGVWAQQERPPAPVEVEAVRQGVLSQPLVYQGTVFFDRTARVTSE 62

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG +++ QV  G ++ +G  L+          +   +     LR  I+  +       N
Sbjct: 63  VSGRVEEVQVREGQRVNRGDTLVRLGSDILGQRLLAARAQADELRVQIERARQNFKRAEN 122

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            +     + ++ ++             ++  N     +  + K  L     + L RL
Sbjct: 123 LFRQNLSSQQAYDDAHYALEELKFRLVAQEHNLRALELELAHKRILAPFDGVVLQRL 179


>gi|224367192|ref|YP_002601355.1| HlyD [Desulfobacterium autotrophicum HRM2]
 gi|223689908|gb|ACN13191.1| HlyD [Desulfobacterium autotrophicum HRM2]
          Length = 383

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 42/117 (35%), Gaps = 2/117 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K+  V  G ++  G  L   + ++  + I  +  ++K     ++  +   D+   + 
Sbjct: 73  GRVKRLDVHVGDRVKAGQVLGEMDPVDLNEHIRAQDATLKRASAQLNEAQVRRDYAQTQA 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              E   ++R         K H     V   G+++    L        ++   R +L
Sbjct: 133 LRYEHLLQARSTSEEVVATKQHDLL--VAKAGLTAAQEELYSLRAEREALAAQRSNL 187



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/177 (11%), Positives = 60/177 (33%), Gaps = 18/177 (10%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD---------- 265
           +  Q+  + +++ +L E   + +        L  E  L+  +  +E+             
Sbjct: 104 IRAQDATLKRASAQLNE--AQVRRDYAQTQALRYEHLLQARSTSEEVVATKQHDLLVAKA 161

Query: 266 -LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L   Q       ++   L   R   ++++P+   +V  +           Q +++++  
Sbjct: 162 GLTAAQEELYSLRAEREALAAQRSNLSLIAPVDSLVVS-RDAEPGTTVVPGQTVVELI-D 219

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
               +I  +    + Q +  G +A +        + K+    + +++P+        
Sbjct: 220 PDTLWINVRFDQIRAQGLAPGLSAQI---ALRSQKGKQKAGRVLRVEPLADAVTEET 273


>gi|194222994|ref|XP_001916548.1| PREDICTED: desmoplakin [Equus caballus]
          Length = 2810

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 84/217 (38%), Gaps = 11/217 (5%)

Query: 85   LTFEDIET--TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L ++D+    ++  + K  +I  LR  +    +    L    + L++  E+  +++  F 
Sbjct: 1743 LEYDDLRRGRSEADNDKMATISELRSQLQISNNRTLELQGLINDLQRERENLRQEIEKFQ 1802

Query: 143  GKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             +     +++       + V +  +  L +++ +  ++  L+     L    ++ + +  
Sbjct: 1803 KQALEASNRIQESKNQCTQVVQERETLLMKIKVLEQDKTRLQRLEDELNRAKTTLEAESR 1862

Query: 201  MMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-------NIHEQKNMLRHINELYDEANL 253
            + + L  +    QNDLNQ +    +    +R+       +  E+ ++   I  L  E   
Sbjct: 1863 VKQRLESEKQQIQNDLNQWKTQYSRKEEAIRKIESEREKSEREKNSLRSEIERLQAEIKR 1922

Query: 254  EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                Y +++     + Q     E S+L       +Q+
Sbjct: 1923 IEERYRRKLEDSTRETQSQLETERSRLQREIDKLKQR 1959



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 84/245 (34%), Gaps = 32/245 (13%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVS--IKNLRCHIDTEKSALDFLNNKYD---VLEKA 130
             +      L   +   + D    KK+   ++ LR  +  +   +  L  + +   +++K 
Sbjct: 1583 QKQKADEELNRLKKTASEDSSKRKKLEEELEGLRRSLKEQAIKITSLTQQLEQASIVKKK 1642

Query: 131  FESREEQLLDFL------GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN----RLD 180
             E    Q  D L       +      +  +  + ++ R L  +   ++  +L     +  
Sbjct: 1643 SEDDLRQQRDVLDGHLREKQRTQEELRRLSLEVEALRRQLLQEQENVKQAHLRNEHFQKA 1702

Query: 181  LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST------------- 227
            +E+KS  L       ++  ++ ++L +++ + + +L                        
Sbjct: 1703 IEDKSRSLNESKIEIERLQSLTESLTKEHLMLEEELRNLRLEYDDLRRGRSEADNDKMAT 1762

Query: 228  -LELRENIHEQKNMLRHINELYDEANLEFANYLKEI---SRDLEQNQRTFADEMSKLTIL 283
              ELR  +    N    +  L ++   E  N  +EI    +   +      +  ++ T +
Sbjct: 1763 ISELRSQLQISNNRTLELQGLINDLQRERENLRQEIEKFQKQALEASNRIQESKNQCTQV 1822

Query: 284  EKTRE 288
             + RE
Sbjct: 1823 VQERE 1827



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 76/214 (35%), Gaps = 12/214 (5%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L    + ET +   L+  + K  R   D +K+     NN         + +E++L+    
Sbjct: 1500 LKQLIETETKERKCLEDENAKLQRAQYDLQKA-----NNSATETISKLKVQEQELMRLRV 1554

Query: 144  KYH--STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             Y   S    V +  I+    SLK    + +        L+  +S   +     +++L  
Sbjct: 1555 DYERISQERTVKDQDITRFQSSLKELQLQKQKADEELNRLKKTASEDSSKRKKLEEELEG 1614

Query: 202  MKNLFEKNAVSQNDLNQQERIVY----KSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            ++   ++ A+    L QQ         KS  +LR+        LR      +E     + 
Sbjct: 1615 LRRSLKEQAIKITSLTQQLEQASIVKKKSEDDLRQQRDVLDGHLREKQRTQEELR-RLSL 1673

Query: 258  YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             ++ + R L Q Q        +    +K  E K+
Sbjct: 1674 EVEALRRQLLQEQENVKQAHLRNEHFQKAIEDKS 1707



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 25/218 (11%), Positives = 81/218 (37%), Gaps = 17/218 (7%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH---- 146
            +    ++++   +  +R   ++ +      +    + +     R +QL++   K      
Sbjct: 1457 QRKQQLEIELRQVTQMRTE-ESTRYKQSLDDAAKPIQDNKEIERLKQLIETETKERKCLE 1515

Query: 147  --STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT---- 200
              +   +   Y +     S    +++++      + L      +    +   +D+T    
Sbjct: 1516 DENAKLQRAQYDLQKANNSATETISKLKVQEQELMRLRVDYERISQERTVKDQDITRFQS 1575

Query: 201  MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA-----NLEF 255
             +K L  +   +  +LN+ ++   + + + ++   E + + R + E   +       LE 
Sbjct: 1576 SLKELQLQKQKADEELNRLKKTASEDSSKRKKLEEELEGLRRSLKEQAIKITSLTQQLEQ 1635

Query: 256  ANYLKEISR-DLEQNQRTFADEMSKLTILEKTREQKTI 292
            A+ +K+ S  DL Q +      + +    ++   + ++
Sbjct: 1636 ASIVKKKSEDDLRQQRDVLDGHLREKQRTQEELRRLSL 1673


>gi|229593255|ref|YP_002875374.1| putative ABC transporter exported protein [Pseudomonas fluorescens
           SBW25]
 gi|229365121|emb|CAY53348.1| putative ABC transport system, exported protein [Pseudomonas
           fluorescens SBW25]
          Length = 327

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/291 (10%), Positives = 87/291 (29%), Gaps = 17/291 (5%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            D L +     +         +   +  +L  +R    +++      + +       Q+ 
Sbjct: 38  QDRLPEGIGMGNGRLESTEVQIAAKIPGRLAEVRVDEGDKVLKGQLLARMDTRTLEAQRA 97

Query: 199 LTMMKNLFEKNAVSQN----DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
               + L  K   +       L Q E+++    L+  + ++++      + +        
Sbjct: 98  QAEAEVLRAKENFAAAEANAQLRQSEQLLANQELKRTQELYKRGFASSQLIDQQQARQNT 157

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
               +      +   +       +++  L    +  ++ +PI G I   +          
Sbjct: 158 GNAAVIAAQAQVNSGKAAIGAAQAQVAQLTSEIDDSSLRAPIDGIIQ-LRLAEPGEVLGA 216

Query: 315 -SQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
             + L+ I P+ +    Y+ A VT      +  G  A +              + +    
Sbjct: 217 GGRVLLLIDPNDQYMNLYLPASVT----GRLTIGSDARILLDALPGQPLPAKISFVAAKS 272

Query: 372 PIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               +  +  + + +  + V L++T  +        + G P        +T
Sbjct: 273 QFTPKEVETRDERQKLVFRVKLRLTQPSAVPQA---KPGMPGAGYVRTADT 320



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 65/211 (30%), Gaps = 8/211 (3%)

Query: 7   KNLKRNHPAS--LKRMTLLSIIGIIGLITW-SILLPIEISVSSSGEILNEDNVVEIKSPF 63
             +  NH  S       +  ++G  G   W S    +       G    E   V+I +  
Sbjct: 5   AAMSTNHHTSRLFAVALIALLLGAGGFGYWRSTQDRLPEG-IGMGNGRLESTEVQIAAKI 63

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G + + +V+ G ++L+G  L   +           +  +   + +    ++    L   
Sbjct: 64  PGRLAEVRVDEGDKVLKGQLLARMDTRTLEAQRAQAEAEVLRAKENFAAAEANAQ-LRQS 122

Query: 124 YDVLEKAFESREEQLLDF---LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +L      R ++L        +         N G ++V  +     +   +I   +  
Sbjct: 123 EQLLANQELKRTQELYKRGFASSQLIDQQQARQNTGNAAVIAAQAQVNSGKAAIGAAQAQ 182

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +   +S +         D  +   L E   V
Sbjct: 183 VAQLTSEIDDSSLRAPIDGIIQLRLAEPGEV 213


>gi|227326980|ref|ZP_03831004.1| hypothetical protein PcarcW_06534 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 342

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/290 (10%), Positives = 88/290 (30%), Gaps = 17/290 (5%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G + +  V+ G  +  G PL T +     +  +  + ++ + +  +   +        +
Sbjct: 51  GGRVAELNVDEGDAVQAGQPLATLDAAPYLNAQNQAQANLASAQAQLQLAQEGY----RQ 106

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++ +   +  + Q             +      +     L    T            ++
Sbjct: 107 EEIAQVRSQVVQSQAAYDYANSFYQRQQGLWDKRAISANMLDDARTTRNQALATLQAAKD 166

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K S   +     +           +  ++Q +LN+Q+  +   +  +      +K  +  
Sbjct: 167 KLSQFESGNRPQEIAAAQAAVAQAEAGLAQAELNKQDAELLAPSPGVILTRAAEKGSMLA 226

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                   +L    +   +   + +         S++ I    R  +     + G +  +
Sbjct: 227 SGSTVFTLSLTRPVW---VRAYVSEKDLGRVVPGSQMLIYTDGRPNQPYRGKV-GFVSPS 282

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH-VKKGYTATVRF 352
             F+  +   +++ L            R ++        +++G   T+RF
Sbjct: 283 AEFTPKSV--ETEDL------RTDLVYRLRIVVTDPDDGLRQGMPVTLRF 324



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 95/297 (31%), Gaps = 36/297 (12%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            + +V E       + L       +          ++S    L++     R        +
Sbjct: 55  AELNVDEGDAVQAGQPLATLDAAPYLNAQNQAQANLASAQAQLQLAQEGYRQ--EEIAQV 112

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            ++    +A            + L++K A+S N L+       ++   L+          
Sbjct: 113 RSQVVQSQAAYDYANSFYQRQQGLWDKRAISANMLDDARTTRNQALATLQA--------- 163

Query: 242 RHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                    A  + + +      +++   Q   A   + L   E  ++   +L+P  G I
Sbjct: 164 ---------AKDKLSQFESGNRPQEIAAAQAAVAQAEAGLAQAELNKQDAELLAPSPGVI 214

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           +  ++    +       +  +   ++  ++RA V+ K +  V  G        +      
Sbjct: 215 LT-RAAEKGSMLASGSTVFTLS-LTRPVWVRAYVSEKDLGRVVPGSQ---MLIYTDGRPN 269

Query: 361 KKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           + ++  +  + P       S +  +L+T   Y + + +TD         LR G P  
Sbjct: 270 QPYRGKVGFVSPSAEFTPKSVETEDLRTDLVYRLRIVVTDPDDG-----LRQGMPVT 321


>gi|170680467|ref|YP_001745877.1| membrane fusion protein family protein [Escherichia coli SMS-3-5]
 gi|170518185|gb|ACB16363.1| membrane fusion protein (MFP) (TC 8.A.1) family [Escherichia coli
           SMS-3-5]
          Length = 378

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 74/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +L  ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQILSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 54/153 (35%), Gaps = 4/153 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       ++A  +R++   ++      + +KV  +    +  + +  L +  S+  + 
Sbjct: 126 EMAANT---QQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSA 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNA 210
            + +   S L +L+      +  +K  L E   
Sbjct: 183 AEQKQILSQLDSLVLGEHSQIASLKAQLAEAKY 215


>gi|194431250|ref|ZP_03063543.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Shigella dysenteriae 1012]
 gi|194420705|gb|EDX36781.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Shigella dysenteriae 1012]
 gi|332084461|gb|EGI89656.1| hlyD family secretion family protein [Shigella dysenteriae 155-74]
 gi|332085038|gb|EGI90218.1| hlyD family secretion family protein [Shigella boydii 5216-82]
          Length = 378

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAENKQRALGAELDEMAANTQQAKATRDKFAKEYQRYSRGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAENKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYSRGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|326801468|ref|YP_004319287.1| biotin/lipoyl attachment domain-containing protein
           [Sphingobacterium sp. 21]
 gi|326552232|gb|ADZ80617.1| biotin/lipoyl attachment domain-containing protein
           [Sphingobacterium sp. 21]
          Length = 305

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 103/299 (34%), Gaps = 39/299 (13%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++         +LL   G+       +       ++   K    +  +I   R ++  + 
Sbjct: 37  IVPAEANGIIRELLLEEGQTIPAGKVIGYIDTLQLFLKKKQLEAQAGAILSKRPNIATEI 96

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           + L+  L   + +   + NL + +A +  +L+     V      +             + 
Sbjct: 97  AALQEELRYAKNEQERLTNLVKADAATPKELDAATAQVNIIRKRIEGQQSSLGVASVSLQ 156

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E                           A   +++  L+    +  I++P+ GT++  + 
Sbjct: 157 E-------------------------ETAPLHAQIEQLDDQLRKSKIVNPVTGTVLA-KY 190

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
             ++  A   +PL +I  ++K   +RA +T ++   VK G    V+         K +  
Sbjct: 191 VEANEMATIGKPLYRIA-NTKKMILRAYITCEKFADVKIGQRVRVQVDK-GKAAFKDYPG 248

Query: 366 IIEKID-----PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           ++E I         + Q  + +    Y + +K+      +N+  L+ G   +V+   + 
Sbjct: 249 VVEWISDQAEFTPKTIQTKDERANLVYAMKVKV------ENDGYLKIGMYGQVILATQK 301



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 11/142 (7%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIET---TDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           GII++  +E G  I  G  +   + ++       ++ +  +I + R +I TE +AL    
Sbjct: 44  GIIRELLLEEGQTIPAGKVIGYIDTLQLFLKKKQLEAQAGAILSKRPNIATEIAALQE-- 101

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                 E  +   E++ L  L K  +   K  +   + V    K    +  S+ +  + L
Sbjct: 102 ------ELRYAKNEQERLTNLVKADAATPKELDAATAQVNIIRKRIEGQQSSLGVASVSL 155

Query: 182 ENKSSLLRALLSSHQKDLTMMK 203
           + +++ L A +      L   K
Sbjct: 156 QEETAPLHAQIEQLDDQLRKSK 177


>gi|239999517|ref|ZP_04719441.1| putative ABC transporter, periplasmic protein [Neisseria
           gonorrhoeae 35/02]
 gi|240017141|ref|ZP_04723681.1| putative ABC transporter, periplasmic protein [Neisseria
           gonorrhoeae FA6140]
 gi|268595328|ref|ZP_06129495.1| macrolide-specific efflux protein MacA [Neisseria gonorrhoeae
           35/02]
 gi|293398571|ref|ZP_06642749.1| HlyD family secretion protein [Neisseria gonorrhoeae F62]
 gi|268548717|gb|EEZ44135.1| macrolide-specific efflux protein MacA [Neisseria gonorrhoeae
           35/02]
 gi|291611042|gb|EFF40139.1| HlyD family secretion protein [Neisseria gonorrhoeae F62]
          Length = 392

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ +D++
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLDME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 83/257 (32%), Gaps = 26/257 (10%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               +++ +Y+       K  L+  + S+ Q +   M+        S+ +  Q + +  +
Sbjct: 64  QASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLDMEK-------SKLETYQAKLVSAQ 116

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             L   E  ++++  L   +    E      + L     ++ + +         +   E 
Sbjct: 117 IALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELKALIRQSKISINTAES 176

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVK 343
                 I + + GT+V             +Q    IV  +   +   + ++    I  VK
Sbjct: 177 DLGYTRITATMDGTVVSIPV-EEGQTVNAAQSAPTIVQLANLDMMLNKMQIAEGDITKVK 235

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVILKITD 395
            G    + F   ++      KA ++ +DP ++           +      YY     +  
Sbjct: 236 AGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYARSFVP- 291

Query: 396 LAFSDNNIELRNGFPAE 412
               + + +L  G   +
Sbjct: 292 ----NPDGKLATGMTTQ 304


>gi|282600432|ref|ZP_05974259.2| multidrug efflux RND membrane fusion protein [Providencia
           rustigianii DSM 4541]
 gi|282565320|gb|EFB70855.1| multidrug efflux RND membrane fusion protein [Providencia
           rustigianii DSM 4541]
          Length = 371

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 67/208 (32%), Gaps = 18/208 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
              S   + + + +V  +    R ++   +   R+ + L++        +L      ++ 
Sbjct: 86  GFESGQQVKKGQLLVQLNDAVERADLARYQAQYRNASRLHERTRSLSTQHLV-AEAQVDS 144

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +         +   +    QK I +P  GTI   Q      Y    + +  +V  ++  
Sbjct: 145 TRAERDMAQGLIQQTQALIAQKAIHAPFDGTIGIRQVH-EGQYLSPGEAIASLV-DTQTL 202

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +   +  +    + +G    +    Y D     F A I  IDP+I +            
Sbjct: 203 KLNFSLDEQASPELHQGQEVDITVDAYPDT---PFPARITAIDPLIGKS----------- 248

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFT 416
                      ++N +L+ G  A V   
Sbjct: 249 -RTVALQATLDNSNGQLKAGMYANVNVV 275



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 5/132 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             GE+     V  + +  SG I K   E+G Q+ +G  L+   D      +   +   +N
Sbjct: 62  GVGELEAGSQVF-VAAETSGRITKIGFESGQQVKKGQLLVQLNDAVERADLARYQAQYRN 120

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                +  +S    L+ ++ V E   +S   +     G    T + +    I + +    
Sbjct: 121 ASRLHERTRS----LSTQHLVAEAQVDSTRAERDMAQGLIQQTQALIAQKAIHAPFDGTI 176

Query: 166 MKLTRMRSIYLN 177
                    YL+
Sbjct: 177 GIRQVHEGQYLS 188


>gi|182678717|ref|YP_001832863.1| secretion protein HlyD family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182634600|gb|ACB95374.1| secretion protein HlyD family protein [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 350

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/173 (11%), Positives = 59/173 (34%), Gaps = 4/173 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  V ++G +   +  V++ S + G + +  V  G  +  G  +      ET   +   +
Sbjct: 58  DGIVGTNGRVEATE--VDVSSKYGGRLSELTVNEGDDVTAGEIVARISSPETEAQLRGAQ 115

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD--FLGKYHSTCSKVFNYGIS 158
             +   +  +   K+ +       D  +  F   +  +       +        +N   +
Sbjct: 116 AQVLKAKQALAEAKALIAQRAGDLDFAQSDFNRGQALVRQGYLTEQTFDMRRSRYNVAQA 175

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           ++  +   +     +I     D++   ++L  L+     +  ++  L +   V
Sbjct: 176 ALDAANAQRDQAQFAIDAAEADVQRLEAMLVDLVLRAPVNGRVLYKLVQNGEV 228



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 80/282 (28%), Gaps = 13/282 (4%)

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             +     +SS Y     +LT      +   ++  + S              ++K    K
Sbjct: 66  RVEATEVDVSSKYGGRLSELTVNEGDDVTAGEIVARISSPETEAQLRGAQAQVLK---AK 122

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---- 264
            A+++      +R       +   N  +      ++ E   +      N  +        
Sbjct: 123 QALAEAKALIAQRAGDLDFAQSDFNRGQALVRQGYLTEQTFDMRRSRYNVAQAALDAANA 182

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
             +Q Q       + +  LE       + +P+ G ++Y    +          ++ ++  
Sbjct: 183 QRDQAQFAIDAAEADVQRLEAMLVDLVLRAPVNGRVLYKLVQN-GEVVAPGMRVVTLLNL 241

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRF---PHYADIREKKFKAIIEKIDPIISQQDNNL 381
           S   Y+   +   Q   +  G  A +     P Y       F A   +  P   +  +  
Sbjct: 242 SD-VYMSIYLPASQAGSLSLGDEARIILDPAPEYVIPTTISFVATEAQFTPKSVETASER 300

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           +   +  V L+      +    +++ G            T  
Sbjct: 301 EKLMF-RVKLQADPKLLNKYVNQVKTGVRGVGYVRTNVKTPW 341


>gi|159044535|ref|YP_001533329.1| hypothetical protein Dshi_1989 [Dinoroseobacter shibae DFL 12]
 gi|157912295|gb|ABV93728.1| hypothetical protein Dshi_1989 [Dinoroseobacter shibae DFL 12]
          Length = 410

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 43/132 (32%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V I S  +G + K  V+   ++  G P+   +        +  +  I+ +   +   +
Sbjct: 73  RTVTILSESAGRVDKVYVDINQEVAAGDPIFRLDSSRQEAAAETARRQIEEVDAALLVAQ 132

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           S L       +  + A+   E+ L           S V    + ++   L      + + 
Sbjct: 133 SDLGGATGALEQAQAAYRQIEQDLNRRETLLAEGSSAVTQREVDTLRNQLDEAQGALDAA 192

Query: 175 YLNRLDLENKSS 186
             N   L+ +  
Sbjct: 193 EANLRSLQTRIE 204


>gi|15431318|ref|NP_006762.3| keratin, type I cuticular Ha8 [Homo sapiens]
 gi|229462951|sp|O76015|KRT38_HUMAN RecName: Full=Keratin, type I cuticular Ha8; AltName: Full=Hair
           keratin, type I Ha8; AltName: Full=Keratin-38; Short=K38
          Length = 456

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 86/212 (40%), Gaps = 5/212 (2%)

Query: 83  PLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            ++  ++ +   D   +K  S ++LR  ++ +K     L +   + +   E+++E L + 
Sbjct: 175 LIVQIDNAKLAADDFRIKLESERSLRQLVEADKCGTQKLLDDATLAKADLEAQQESLKEE 234

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                S   +      S +   L+++L    +I LNR+ L    +   A+L ++++D+  
Sbjct: 235 QLSLKSNHEQEVKILRSQLGEKLRIELDIEPTIDLNRV-LGEMRAQYEAMLETNRQDVEQ 293

Query: 202 MKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                +   +S  D++  E +       LELR  ++  +   +  + L D          
Sbjct: 294 WFQ-AQSEGISLQDMSCSEELQCCQSEILELRCTVNALEVERQAQHTLKDCLQNSLCEAE 352

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +L Q Q   ++   +L+ +    E++ 
Sbjct: 353 DRFGTELAQMQSLISNVEEQLSEIRADLERQN 384


>gi|12311759|emb|CAA76390.2| type I hair keratin 8 [Homo sapiens]
 gi|119581138|gb|EAW60734.1| keratin, hair, acidic, 8 [Homo sapiens]
 gi|124297117|gb|AAI31716.1| Keratin 38 [Homo sapiens]
          Length = 456

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 86/212 (40%), Gaps = 5/212 (2%)

Query: 83  PLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            ++  ++ +   D   +K  S ++LR  ++ +K     L +   + +   E+++E L + 
Sbjct: 175 LIVQIDNAKLAADDFRIKLESERSLRQLVEADKCGTQKLLDDATLAKADLEAQQESLKEE 234

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                S   +      S +   L+++L    +I LNR+ L    +   A+L ++++D+  
Sbjct: 235 QLSLKSNHEQEVKILRSQLGEKLRIELDIEPTIDLNRV-LGEMRAQYEAMLETNRQDVEQ 293

Query: 202 MKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                +   +S  D++  E +       LELR  ++  +   +  + L D          
Sbjct: 294 WFQ-AQSEGISLQDMSCSEELQCCQSEILELRCTVNALEVERQAQHTLKDCLQNSLCEAE 352

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +L Q Q   ++   +L+ +    E++ 
Sbjct: 353 DRFGTELAQMQSLISNVEEQLSEIRADLERQN 384


>gi|329960013|ref|ZP_08298509.1| efflux transporter, RND family, MFP subunit [Bacteroides fluxus YIT
           12057]
 gi|328533147|gb|EGF59916.1| efflux transporter, RND family, MFP subunit [Bacteroides fluxus YIT
           12057]
          Length = 416

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 106/314 (33%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            D I + +V       ++D E      L  K +  E     R       L ++  T   +
Sbjct: 45  QDNIQIAEVKNGKFMEYVDVEGLIQPILTIKVNAREAGSVERIIGEEGSLLRHGDTILVL 104

Query: 153 FNYGI-SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            N  +  S+         ++ +     +++E KS  L+        DL  ++  F     
Sbjct: 105 ENPDLLRSIEDQRDDWEKQLITYREKEIEMEQKSLNLQQQALQTDYDLNRLRKSFA---- 160

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
                  +E        + +  + E +   +  N      +L   + +  I +DL +N R
Sbjct: 161 -----LDKEEYRMGIKSKAQLEVSEDEYNYKVKNARLQRESLRHDSAVTVIRKDLIRNDR 215

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  K     +      I +P+AG + + +  +        + + +I        + 
Sbjct: 216 ER--ERKKYERACERLNNLVIKAPVAGQLSFVKV-TPGQQVASGESIAEIK-VLDQYKVH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPI-ISQQDNNLQTQE 385
             ++   I  +  G  AT+ +    Y     K    + ++   +D + +    +N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATINYQGRKYPLRITKVVPEVKDRMFDVDLVFVGDMPDNVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEEA 345


>gi|326797659|ref|YP_004315478.1| efflux transporter RND family, MFP subunit [Sphingobacterium sp.
           21]
 gi|326548423|gb|ADZ76808.1| efflux transporter, RND family, MFP subunit [Sphingobacterium sp.
           21]
          Length = 400

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 78/204 (38%), Gaps = 13/204 (6%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLELR 231
           SI      +   +SLL+       + + +++N   ++ V  Q D  +    +  +  E +
Sbjct: 88  SITTQLGGIVKSTSLLQGASVRRGQVIAVLEN---QDYVQLQQDYLESNSQLELADAEYK 144

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             + E      +  +   +A  ++   L   S    + +    +  +        R    
Sbjct: 145 RQL-ELSKQNINAQKTVQQAKSQYLTMLSRTSA--LKERLKLININATTLNAGNIRSTIN 201

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +PI G +    +     +   +  + +IV ++   ++  KV  K +  VKKG +  VR
Sbjct: 202 IYAPINGYVTKVNTN-VGRFVAPNDVMFEIV-NNVNLHVELKVFEKDVSKVKKGQS--VR 257

Query: 352 FPHYADIREKKFKAIIE--KIDPI 373
           F    +  E+  K I+   +IDP 
Sbjct: 258 FTLNNETEERIAKVILVGREIDPD 281


>gi|258646096|ref|ZP_05733565.1| RND membrane fusion protein [Dialister invisus DSM 15470]
 gi|260403474|gb|EEW97021.1| RND membrane fusion protein [Dialister invisus DSM 15470]
          Length = 354

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 23/184 (12%)

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L  +   +   L  +  + D A  +  N  +  S  L Q Q   A         E     
Sbjct: 116 LASSTMARYEKLHELQAISDLAMDQTKNQYELASAQLSQAQAALA-------RAENNLGF 168

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            ++ +   G +V +  +          P++ IV       +    T KQ      G   T
Sbjct: 169 TSLTADRDG-VVGSTLYEVGQVVGAGTPVVLIV-DDTKKDVHISFTEKQYGKYSVGLPCT 226

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           V F  + D++    K  + ++    +           Y+  +        D   ++  G 
Sbjct: 227 VTFWAFPDLQ---LKGTVREVAAAPNTSTGT------YDAKV-----TLIDAPSDVVVGM 272

Query: 410 PAEV 413
            AEV
Sbjct: 273 TAEV 276



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 6/98 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK------NLRCHIDTEKSAL 117
            G I +  V +G ++  G  L+T +  + ++       ++        L          L
Sbjct: 68  GGRITRRLVSSGDRVTAGQVLMTVDSKDASEQAAAAAGALNAAEAQYRLASSTMARYEKL 127

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             L    D+     +++ E     L +  +  ++  N 
Sbjct: 128 HELQAISDLAMDQTKNQYELASAQLSQAQAALARAENN 165


>gi|254881499|ref|ZP_05254209.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294775435|ref|ZP_06740948.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
           PC510]
 gi|319642884|ref|ZP_07997520.1| lipoprotein [Bacteroides sp. 3_1_40A]
 gi|254834292|gb|EET14601.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294450676|gb|EFG19163.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
           PC510]
 gi|317385432|gb|EFV66375.1| lipoprotein [Bacteroides sp. 3_1_40A]
          Length = 355

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 7/81 (8%)

Query: 39  PIEISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
            I+  VS+  +  +     V   +        SG I K  V++G+++ +G  L   +  +
Sbjct: 33  KIDTVVSADKQTFLQFPGKVKAAQDISLAFRVSGTISKIHVKDGARVQEGQLLAELDPTD 92

Query: 92  TTDLIDLKKVSIKNLRCHIDT 112
               +D  +   + ++   + 
Sbjct: 93  YQVQLDATEAEYQQIKAEAER 113


>gi|15966214|ref|NP_386567.1| putative transport transmembrane protein [Sinorhizobium meliloti
           1021]
 gi|307308565|ref|ZP_07588267.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           BL225C]
 gi|307317343|ref|ZP_07596783.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           AK83]
 gi|15075484|emb|CAC47040.1| Multidrug resistance protein [Sinorhizobium meliloti 1021]
 gi|306896932|gb|EFN27678.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           AK83]
 gi|306900965|gb|EFN31574.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           BL225C]
          Length = 395

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 78/247 (31%), Gaps = 29/247 (11%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM-KNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
           LN   L  + S L A L+  +  L  +   L E  A S+      ER V  S       +
Sbjct: 97  LNEDALLLQKSQLEANLAKAEASLAQLHAQLAEVTANSEEATRVAERAVQLSK---NGTV 153

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              +            A +  A     ++              +++  ++    +  + +
Sbjct: 154 STAEADRLKALAAAGRARVRSAEQSVSVAT------ADIKVVQAQIDDVDLRLARTAVKA 207

Query: 295 PIAGTIVYNQSFSSSNYAQ-QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           P++G I    +      A    +PL  I+       + A V    +  +  G TATV+  
Sbjct: 208 PVSGVISRKNA-KVGAIASGSGEPLFAII-RDGEIEMWADVAESDVIKLAVGQTATVKLA 265

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                     +  I  I P +  Q           V + +TD + +      R G  A  
Sbjct: 266 G----STTTIEGKIRLIAPTVDPQTRLGT------VRISLTDASKA------RAGMYASA 309

Query: 414 LFTAKNT 420
           +  A+  
Sbjct: 310 VIVAEQK 316



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 19/209 (9%), Positives = 62/209 (29%), Gaps = 8/209 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V ++G I   D +          I+   V+ G ++ +G  L    +          + ++
Sbjct: 54  VIATGSIEAVDEIYVSPLVDGLAIRSLNVDVGDRVEEGGTLAVLNEDALLLQKSQLEANL 113

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREE-----QLLDFLGKYHSTCSKVFNYGIS 158
                 +    + L  +    +   +  E   +      +           +      + 
Sbjct: 114 AKAEASLAQLHAQLAEVTANSEEATRVAERAVQLSKNGTVSTAEADRLKALAAAGRARVR 173

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           S  +S+ +    ++ +     D++ +   L            + +   +  A++      
Sbjct: 174 SAEQSVSVATADIKVVQAQIDDVDLR---LARTAVKAPVSGVISRKNAKVGAIASGSGEP 230

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINEL 247
              I+    +E+  ++ E   +   + + 
Sbjct: 231 LFAIIRDGEIEMWADVAESDVIKLAVGQT 259


>gi|215488876|ref|YP_002331307.1| hypothetical protein E2348C_3843 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312968066|ref|ZP_07782277.1| hlyD family secretion family protein [Escherichia coli 2362-75]
 gi|215266948|emb|CAS11391.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|312287325|gb|EFR15234.1| hlyD family secretion family protein [Escherichia coli 2362-75]
          Length = 378

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYLARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQVVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNADIDALPDGIYAQV 347


>gi|78060837|ref|YP_367412.1| HlyD family secretion protein [Burkholderia sp. 383]
 gi|77965387|gb|ABB06768.1| Secretion protein HlyD family [Burkholderia sp. 383]
          Length = 324

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 9/175 (5%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q      ER+   +  + R  + + K   R         NL  +  ++E    +EQ 
Sbjct: 77  VIDQARYTLAERLAEATLAQRRATLAQAK---REYARNLQLGNLVASEQVEESRTRVEQG 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   AD    L   +   ++ TI+SP+ G  + +++     Y    + L+ +V       
Sbjct: 134 EAAVADAQVSLDTAKLNLQRTTIVSPVDGY-LNDRAPRVGEYVAAGRALLSVV-DRNSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +       +++ +  G    +          +  +  ++ I   I  +D      
Sbjct: 192 VDGYFEETKLRGIHIGQPVDIIV----MGEPRALRGHVQSIVAAIEDRDRTQGAN 242



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 42/118 (35%), Gaps = 6/118 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++    +G+I   QV +  ++ +G  L   +    T    L + ++   R  + 
Sbjct: 43  VRADVIQVAPDVAGLITSVQVADNQEVKRGQVLFVIDQARYTLAERLAEATLAQRRATLA 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             K            L+       EQ+ +   +     + V +  +S     L ++ T
Sbjct: 103 QAKREYAR------NLQLGNLVASEQVEESRTRVEQGEAAVADAQVSLDTAKLNLQRT 154


>gi|310114346|ref|XP_003119933.1| PREDICTED: rootletin-like [Homo sapiens]
          Length = 824

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 68/205 (33%), Gaps = 9/205 (4%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHSTCS 150
                  +   + LR  +   +  L  L  +   +E++ E   RE Q         +   
Sbjct: 207 AAERGDVEREAERLRAQLTVAQEGLAALRQELQGVEESREGLHREAQEARRALSDEAREK 266

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK----NLF 206
            V     S +  ++        S   ++ + E K  +L    ++ Q++ + ++     L 
Sbjct: 267 DVLLLFNSELRATICRAEQEKASFKRSKEEKEQKLLILEEAQAALQQEASALRAHLWELE 326

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE---IS 263
           +    ++ +L +  R V     E +    E   +    ++   E   + A    +     
Sbjct: 327 QARGDARQELRELHRQVRTLKAENQRRSGEAHELQAQCSQEVLELRRQAAKAEAKHEGAR 386

Query: 264 RDLEQNQRTFADEMSKLTILEKTRE 288
           +++   QR  A+  +      +  +
Sbjct: 387 KEVLGLQRKLAEVEAAGEAHGQRLQ 411


>gi|270294941|ref|ZP_06201142.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317477939|ref|ZP_07937122.1| efflux transporter [Bacteroides sp. 4_1_36]
 gi|270274188|gb|EFA20049.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316905853|gb|EFV27624.1| efflux transporter [Bacteroides sp. 4_1_36]
          Length = 391

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 48/102 (47%), Gaps = 3/102 (2%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           VEI+   SG I K  V+ G+ + +G  L + + ++    ++  K +++  +  ++T++  
Sbjct: 57  VEIRPMVSGFITKLHVDEGATVRKGQVLFSIDPVQYQAAVNSAKAAVETAKAAVNTQELT 116

Query: 117 LD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++    LN K  + +   +  E QL     +     +++ N 
Sbjct: 117 VNNKRELNKKNIISDYDLQMAENQLAQTKAQLAQANAQLVNA 158



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 29/99 (29%), Gaps = 3/99 (3%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFAD 275
           Q +  V  +   +             +N   +       +   L+     L Q +   A 
Sbjct: 91  QYQAAVNSAKAAVETAKAAVNTQELTVNNKRELNKKNIISDYDLQMAENQLAQTKAQLAQ 150

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             ++L   +      ++ SP  G +V +  +   +    
Sbjct: 151 ANAQLVNAKNNLSYTSVTSPSDG-VVGSIPYRVGSLVSP 188


>gi|91213630|ref|YP_543616.1| multidrug resistance protein MdtN [Escherichia coli UTI89]
 gi|117626369|ref|YP_859692.1| multidrug resistance protein MdtN [Escherichia coli APEC O1]
 gi|218561172|ref|YP_002394085.1| multidrug resistance protein MdtN [Escherichia coli S88]
 gi|237703669|ref|ZP_04534150.1| multidrug resistance protein MdtN [Escherichia sp. 3_2_53FAA]
 gi|306815785|ref|ZP_07449934.1| multidrug resistance protein MdtN [Escherichia coli NC101]
 gi|91075204|gb|ABE10085.1| hypothetical protein YjcR [Escherichia coli UTI89]
 gi|115515493|gb|ABJ03568.1| putative membrane fusion protein of efflux pump [Escherichia coli
           APEC O1]
 gi|218367941|emb|CAR05739.1| membrane fusion protein of efflux pump [Escherichia coli S88]
 gi|226901581|gb|EEH87840.1| multidrug resistance protein MdtN [Escherichia sp. 3_2_53FAA]
 gi|294493996|gb|ADE92752.1| multidrug resistance protein MdtN [Escherichia coli IHE3034]
 gi|305851447|gb|EFM51902.1| multidrug resistance protein MdtN [Escherichia coli NC101]
 gi|307629153|gb|ADN73457.1| multidrug resistance protein MdtN [Escherichia coli UM146]
 gi|315287892|gb|EFU47294.1| efflux pump membrane protein [Escherichia coli MS 110-3]
 gi|323950352|gb|EGB46233.1| efflux pump membrane protein [Escherichia coli H252]
 gi|323954432|gb|EGB50216.1| efflux pump membrane protein [Escherichia coli H263]
 gi|324008658|gb|EGB77877.1| efflux pump membrane protein [Escherichia coli MS 57-2]
          Length = 343

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 87/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L  +  VS  ++++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 SVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTLATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 51/160 (31%), Gaps = 8/160 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSS--------LLRALLSSHQKDLTMMK 203
               LN + L+ +S+         L A  ++ + D+ + K
Sbjct: 164 AEADLNAVLLQAQSAASSVSGVDALVAQRAAVEADIALTK 203


>gi|260061046|ref|YP_003194126.1| RND family efflux transporter MFP subunit [Robiginitalea biformata
           HTCC2501]
 gi|88785178|gb|EAR16347.1| efflux transporter, RND family, MFP subunit [Robiginitalea
           biformata HTCC2501]
          Length = 418

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 89/264 (33%), Gaps = 14/264 (5%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK---VFNYGISSVYRSLKMKLTRM 171
           S LD L    D+  +A ++R ++L +      ++  +   V      +  R L   +   
Sbjct: 50  SDLDTLLANGDL--EAIKARRQELSETEKNLKASLRQIDSVIASLEGNANRPLVSTMQLQ 107

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            + + + L+L+      + +L   +   T+ + L E      + + + + +       L 
Sbjct: 108 PARFDHYLELQGDVQTKQNVLLYPEMAGTLERVLVEDG----DQVRKGQVLARIDDGGLS 163

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             + EQ      + E   E      +          Q +  F    +++   E    +  
Sbjct: 164 SGL-EQLRTQAALAETTYERQKRLWDQNIGSEIQYLQAKTEFESLTNQIRQAEAQLAKSA 222

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           I +P +G +       +          P++++V  S   Y+   V    +  V+ G    
Sbjct: 223 IRAPFSGIVDDVLL-EAGTTVNPAAGMPVIRLVNLSD-MYVEVDVPESYLPSVRPGKDVM 280

Query: 350 VRFPHYADIREKKFKAIIEKIDPI 373
           +  P   D    K +     I+P 
Sbjct: 281 IFLPVLGDSIRTKVRQTGNYINPT 304



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 36/96 (37%), Gaps = 3/96 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---LN 121
           G +++  VE+G Q+ +G  L   +D   +  ++  +          + +K   D      
Sbjct: 135 GTLERVLVEDGDQVRKGQVLARIDDGGLSSGLEQLRTQAALAETTYERQKRLWDQNIGSE 194

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            +Y   +  FES   Q+     +   +  +    GI
Sbjct: 195 IQYLQAKTEFESLTNQIRQAEAQLAKSAIRAPFSGI 230


>gi|313669427|ref|YP_004049854.1| secretion protein HlyD family protein [Sulfuricurvum kujiense DSM
           16994]
 gi|313156624|gb|ADR35301.1| secretion protein HlyD family protein [Sulfuricurvum kujiense DSM
           16994]
          Length = 261

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 76/227 (33%), Gaps = 26/227 (11%)

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
           L +   K++   K   E   ++Q +L+ Q      + +EL  N+   K +L    ++  +
Sbjct: 58  LYTIDSKEIDSAKTQVELG-IAQAELSLQMYQNQYANMEL--NLERNKRLLAQ--DMVSK 112

Query: 251 ANLEFANYLKEISRDLEQ-NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
             +E     K+  +++    Q+      ++L  +E       I +P  G ++        
Sbjct: 113 FEVENLELSKKNLKNMIDIAQQQVNQAKARLKEVENQYNYLRITAPNNGVVIQKNI-KVG 171

Query: 310 NYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
             A    P   IV        + A++    +Q V  G    +  P        K  AI+ 
Sbjct: 172 EMAMPGTPA--IVLADMNALKVEAEIAEDNLQLVHVGKQVKISIPSVGYNSIGKISAIV- 228

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                     +N  T  +    +K    A   +   +  G  A +  
Sbjct: 229 --------PSSNSTTHTF---RIK----ASFPSKQTVYPGMYATIGI 260



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 41/127 (32%), Gaps = 2/127 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +  DN   I S   G +    V  GS + +G  L T +  E        ++ I      +
Sbjct: 25  VISDNQKMITSRNMGFVTNVTVSEGSLVRKGDLLYTIDSKEIDSAKTQVELGIAQAELSL 84

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              ++   + N + ++        ++ +  F  +      K     I    + +     R
Sbjct: 85  QMYQN--QYANMELNLERNKRLLAQDMVSKFEVENLELSKKNLKNMIDIAQQQVNQAKAR 142

Query: 171 MRSIYLN 177
           ++ +   
Sbjct: 143 LKEVENQ 149


>gi|260464140|ref|ZP_05812334.1| polysaccharide export protein [Mesorhizobium opportunistum WSM2075]
 gi|259030125|gb|EEW31407.1| polysaccharide export protein [Mesorhizobium opportunistum WSM2075]
          Length = 452

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 74/203 (36%), Gaps = 6/203 (2%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
                     ++ + K ++      I  + +     N+K   L+   + R     + L  
Sbjct: 175 ARLRGTLDESVVQIAKEAVAA--ARIKAQLAN----NDKISELDLPPKIRGLMNANLLAT 228

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              T  ++      ++    K  L  +  + +   ++E  S + + +++S Q DL  ++ 
Sbjct: 229 LLPTEQRILETDQHALTTRRKQLLAGIDEVNIALANIEQLSDIQKTVIASSQADLERVRA 288

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L +K  V+  DL+  ER        L E  ++   + R +++L  + +     +      
Sbjct: 289 LNKKGIVTLTDLSNAEREATTQQSHLLEIYNQASTVRRELSQLQRDLDDATQTWTHTALT 348

Query: 265 DLEQNQRTFADEMSKLTILEKTR 287
           +L+ +       +S     E+  
Sbjct: 349 ELQAHNSEIERLVSVRESTEEQI 371


>gi|237747445|ref|ZP_04577925.1| HlyD family secretion protein [Oxalobacter formigenes HOxBLS]
 gi|229378796|gb|EEO28887.1| HlyD family secretion protein [Oxalobacter formigenes HOxBLS]
          Length = 405

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 78/262 (29%), Gaps = 28/262 (10%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  +++         L  E K   + A + S  ++ T+  +       ++ D  + +  
Sbjct: 68  SVGAQVSGQIKKLYVVLGQEVKQGEMIAEIDSQTQENTLNTD------RAKLDNYKAQLE 121

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
             K  L +    +E++ +L   N    +      +       ++ + +         +  
Sbjct: 122 ARKIILNISRKQYERELVLIKTNSTSQQNLENARDAYATARANVNEMESLIRQTQIAINT 181

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPKQI 339
            E       I +P+ GTIV             +Q    +++I   +    I  +++   I
Sbjct: 182 DETNLGYTKIRAPLNGTIVSVPV-EEGQTVNANQTTPTIVQIANLND-MEIDIEISEGDI 239

Query: 340 QHVKKGYTAT------------VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             VK G                 +                +K     S   ++     YY
Sbjct: 240 TKVKPGMDVDYTILSEPNTVFHAKLDSIDPGLTTLTDGSYDKSGSSGSSGSSSSTAAVYY 299

Query: 388 EVILKITDLAFSDNNIELRNGF 409
                +      + + +LR G 
Sbjct: 300 YGRAYVD-----NPDGKLRIGM 316



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 69/175 (39%), Gaps = 20/175 (11%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNEDNVV 57
            +P     ++ + ++ +  L  W                   I   V ++GE+    N+V
Sbjct: 9   KNPKVWIPVSAIIVLLVASLSVWFATRDDDIIYMTEKVRTGNISQVVEATGEV-AAVNLV 67

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            + +  SG IKK  V  G ++ QG  +   +     + ++  +  + N +  ++  K  L
Sbjct: 68  SVGAQVSGQIKKLYVVLGQEVKQGEMIAEIDSQTQENTLNTDRAKLDNYKAQLEARKIIL 127

Query: 118 DFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +    +Y+   VL K   + ++ L +    Y +  + V    + S+ R  ++ + 
Sbjct: 128 NISRKQYERELVLIKTNSTSQQNLENARDAYATARANV--NEMESLIRQTQIAIN 180


>gi|254418745|ref|ZP_05032469.1| auxiliary transport protein, MFP family, putative [Brevundimonas
           sp. BAL3]
 gi|196184922|gb|EDX79898.1| auxiliary transport protein, MFP family, putative [Brevundimonas
           sp. BAL3]
          Length = 366

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 60/196 (30%), Gaps = 18/196 (9%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD--LEQNQRTFADEMSKLTILE 284
            L+ RE   +      ++ +   E +   A   + ++    LEQ +       + L   +
Sbjct: 102 ELQAREEDADIIEARANVAQAQREYDRYKALADRGVAPQVLLEQAETALETARASLQAAQ 161

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
             R  + I +P AGT +   + +          +  +   +    +   +  + +  +K 
Sbjct: 162 ARRGDRVIRAPFAGT-LGLTTVTPGTLINPGAVIATL-DDTSTIRVDFPLPERYLDVLKA 219

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G   T     Y +     F+  I  ID  +++                     F +    
Sbjct: 220 GAPITATADAYGET---PFQGRIALIDTRVNETT-----------RAATARAEFPNPGGR 265

Query: 405 LRNGFPAEVLFTAKNT 420
           +R G    V+      
Sbjct: 266 IRPGMLLRVVVQQGQR 281



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 30/93 (32%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +    +G  +  G PL+  +  E    I   + ++   +   D  K+  D       +
Sbjct: 83  ITRVLFTDGQTVSAGAPLVELQAREEDADIIEARANVAQAQREYDRYKALADRGVAPQVL 142

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           LE+A  + E               +V     + 
Sbjct: 143 LEQAETALETARASLQAAQARRGDRVIRAPFAG 175


>gi|109087706|ref|XP_001088212.1| PREDICTED: plectin-1 isoform 1 [Macaca mulatta]
          Length = 4683

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2319 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2374

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2375 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2434

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2435 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2494

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2495 EETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2538



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 57/201 (28%), Gaps = 13/201 (6%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1480 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1539

Query: 151  KVFNYGISSVY--RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +     + +    RS++ +L               ++          ++++ +++     
Sbjct: 1540 RREEAAVDAQQQKRSIQEELQXXXXXXXXXXGQARQAEAAERSRLRIEEEIRVVR----- 1594

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                   L   ER    +  EL+      +       +  +EA         E  R   Q
Sbjct: 1595 -----LQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQ 1648

Query: 269  NQRTFADEMSKLTILEKTREQ 289
             +   A  +       + +++
Sbjct: 1649 AEAELALRVKAEAEAAREKQR 1669



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2368 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2427

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2428 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2487

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2488 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2547

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2548 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2578



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/200 (11%), Positives = 61/200 (30%), Gaps = 12/200 (6%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + + LR  +  E+ A      + +  ++  E+  E       +  +   +       
Sbjct: 1771 QLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQEL 1830

Query: 159  SVYRSLKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
               R L     + R +     + L  ++          +++L     L  + A +     
Sbjct: 1831 EKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQ 1887

Query: 218  QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            + E  + K   E+   +  +           +++                   R  A+E 
Sbjct: 1888 ELEAELAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEA 1939

Query: 278  SKLTILEKTREQKTILSPIA 297
            ++L  L +  +++  L+   
Sbjct: 1940 ARLRALAEEAKRQRQLAEED 1959



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2456 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2515

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2516 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2573

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2574 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2613



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 54/203 (26%), Gaps = 6/203 (2%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  +   +  L        S       + + L +   + E + L  +        ++  
Sbjct: 1455 DLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1514

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  ++ +      + +    +  E  +   +    S Q++L               
Sbjct: 1515 AHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQXXXXXXXXXXGQAR 1574

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLEQ 268
                 ER   +   E+R    + +   R       E         E     ++   + E+
Sbjct: 1575 QAEAAERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAER 1634

Query: 269  NQRTFADEMSKLTILEKTREQKT 291
             +R   DE  +    E     + 
Sbjct: 1635 LRRQVQDESQRKRQAEAELALRV 1657



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1687 RLRQAEVERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1746

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1747 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1806

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1807 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1862

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1863 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1895



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1592 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1645

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1646 KRQAEAE--LALRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1703

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1704 ETAQRSA--EVELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1761

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1762 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1793



 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 68/213 (31%), Gaps = 16/213 (7%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E T L    ++++K      +  +   +    +   LE       EQ            +
Sbjct: 1980 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLE-------EQAAQHKADIEERLA 2032

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYL---NRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            ++     S + R   +    +R         L L+       A  +  + +L  +++  E
Sbjct: 2033 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAE 2092

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR--- 264
                S+     +     +   E  +   E +  ++      +EA  +    L+E+ R   
Sbjct: 2093 DTLRSKEQAELEAARQRQLAAEEEQRRREAEERVQKSLAAEEEAARQRKAALEEVERLKA 2152

Query: 265  ---DLEQNQRTFADEMSKLTILEKTREQKTILS 294
               +  + +     E ++   L +   QK + +
Sbjct: 2153 KVEEARRLRERAEQESARQLQLAQEAAQKRLQA 2185


>gi|325499770|gb|EGC97629.1| multidrug resistance protein MdtN [Escherichia fergusonii ECD227]
          Length = 343

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 91/259 (35%), Gaps = 31/259 (11%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR----MRSIYLNRLDLENKS 185
               ++ QL+           + +   ++    SL     +     RS+   +L      
Sbjct: 61  ELAVKDNQLVKQGDLLFRIDPRPYEASLAKAQASLTALDKQIMLTQRSVEAQQLGAAAVK 120

Query: 186 SLLRALLSSHQKD---LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
             +   L+   +        ++L  +  VS  D+++       + ++    + + ++ + 
Sbjct: 121 ISVEKALAIVHQTSKTFQRTESLLAEGYVSDEDVDRARTAHRSAQVDYAALLLQAQSAVS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +                 +   + Q +   AD    + + +   E  T+ +P  G +V 
Sbjct: 181 GVGG---------------VDALVAQREAVLAD----IALTKLHLEMATVRAPFDGRVVS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A     ++ +++ G  ATVR         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETELNNIRAGTPATVRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  +
Sbjct: 277 FEGKVDSIGYGVLPDDGGM 295



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 45/135 (33%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + V++    SG I +  V++   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTVDVVPEVSGRIVELAVKDNQLVKQGDLLFRIDPRPYEASLAKAQASLTALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + +++        ++ + E     +      +  T S +    +S           R 
Sbjct: 104 LTQRSVEAQQLGAAAVKISVEKALAIVHQTSKTFQRTESLLAEGYVSDEDVDRARTAHRS 163

Query: 172 RSIYLNRLDLENKSS 186
             +    L L+ +S+
Sbjct: 164 AQVDYAALLLQAQSA 178


>gi|325288462|ref|YP_004264643.1| efflux transporter, RND family, MFP subunit [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324963863|gb|ADY54642.1| efflux transporter, RND family, MFP subunit [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 417

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/335 (13%), Positives = 109/335 (32%), Gaps = 52/335 (15%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--KVFNYGI 157
           +V++  L      +  ++       ++ E    S ++ +  +        +   +     
Sbjct: 50  EVAVAALEKRNLADSISVTGKIESEEIYETVLSSSQKVIKRYKNIGDDVKAGDILVTLDT 109

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSS----LLRALLSSHQKDLTMMKNLFEKNAVSQ 213
             +   L   +  + ++  +  + + ++S      +   +   K    +K L++  A S+
Sbjct: 110 EDLEYQLNKAVLSLDTLKTSTGNAKAQASINLDTAKNSYALAGKAYQNIKALYDTGAASK 169

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +DL+                  +  N L+        A +++ N    ++      Q+  
Sbjct: 170 DDLD------------------QADNALKLAESQVKLAEIQYNNL--NLNSSGSDVQKQM 209

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYN-------QSFSSSNYAQQSQPLMKIVPHSK 326
                 +  L +   + TI SPI+GT+           S S          ++ +     
Sbjct: 210 ERLNLDIQNLNRKIAESTIKSPISGTLTLLDARENQYPSRSQGQV-----QVLDL----S 260

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              ++A V+      +  G  A+V+     +         I  I   +S       T+  
Sbjct: 261 RLIVKADVSQYDAVLLNPGQKASVKVKGLGET----LTGRITSIS-DVSNTTAGSSTEPK 315

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           YEV + + D        +++  +  +V  + K  T
Sbjct: 316 YEVQISLDDSKK-----DIKADYDVDVNISIKEKT 345



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 95/257 (36%), Gaps = 22/257 (8%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLP---IEISVSS------------SGEILNEDNVVEIK 60
            + R+++  I G+  +I    +     +E++V++            +G+I +E+    + 
Sbjct: 22  PIVRISIALIWGLAAIIGMIQIFKPKAVEVAVAALEKRNLADSISVTGKIESEEIYETVL 81

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA---- 116
           S    +IK+     G  +  G  L+T +  +    ++   +S+  L+      K+     
Sbjct: 82  SSSQKVIKR-YKNIGDDVKAGDILVTLDTEDLEYQLNKAVLSLDTLKTSTGNAKAQASIN 140

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           LD   N Y +  KA+++  + L D          +  N  +      +K+   +  ++ L
Sbjct: 141 LDTAKNSYALAGKAYQN-IKALYDTGAASKDDLDQADNA-LKLAESQVKLAEIQYNNLNL 198

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           N    + +  + R  L     +  + ++  +        L       Y S  + +  + +
Sbjct: 199 NSSGSDVQKQMERLNLDIQNLNRKIAESTIKSPISGTLTLLDARENQYPSRSQGQVQVLD 258

Query: 237 QKNMLRHINELYDEANL 253
              ++   +    +A L
Sbjct: 259 LSRLIVKADVSQYDAVL 275


>gi|297701174|ref|XP_002827595.1| PREDICTED: keratin, type I cuticular Ha8-like [Pongo abelii]
          Length = 456

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 86/212 (40%), Gaps = 5/212 (2%)

Query: 83  PLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            ++  ++ +   D   +K  S ++LR  ++ +K     L +   + +   E+++E L + 
Sbjct: 175 LIVQIDNAKLAADDFRIKLESERSLRQLVEADKCGTQKLLDDATLAKADLEAQQESLKEE 234

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                S   +      S +   L+++L    +I LNR+ L    +   A+L ++++D+  
Sbjct: 235 QLSLKSNHEQEVKILRSQLGEKLRIELDIEPTIDLNRV-LGEMRAQYEAMLETNRQDVEQ 293

Query: 202 MKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                +   +S  D++  E +       LELR  ++  +   +  + L D          
Sbjct: 294 WFQ-AQSEGISLQDMSCSEELQCCQSEILELRCTVNALEVERQAQHTLKDCLQNSLCEAE 352

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +L Q Q   ++   +L+ +    E++ 
Sbjct: 353 DRFGTELAQMQSLISNVEEQLSEIRADLERQN 384


>gi|297300244|ref|XP_002805557.1| PREDICTED: plectin-1 isoform 2 [Macaca mulatta]
          Length = 4550

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2186 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2241

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2242 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2301

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2302 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2361

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2362 EETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2405



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 57/201 (28%), Gaps = 13/201 (6%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1347 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1406

Query: 151  KVFNYGISSVY--RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +     + +    RS++ +L               ++          ++++ +++     
Sbjct: 1407 RREEAAVDAQQQKRSIQEELQXXXXXXXXXXGQARQAEAAERSRLRIEEEIRVVR----- 1461

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                   L   ER    +  EL+      +       +  +EA         E  R   Q
Sbjct: 1462 -----LQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQ 1515

Query: 269  NQRTFADEMSKLTILEKTREQ 289
             +   A  +       + +++
Sbjct: 1516 AEAELALRVKAEAEAAREKQR 1536



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2235 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2294

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2295 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2354

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2355 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2414

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2415 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2445



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1643 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1702

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1703 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1759

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1760 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1811

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1812 LAEEAKRQRQLAEED 1826



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2323 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2382

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2383 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2440

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2441 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2480



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 54/203 (26%), Gaps = 6/203 (2%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  +   +  L        S       + + L +   + E + L  +        ++  
Sbjct: 1322 DLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1381

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  ++ +      + +    +  E  +   +    S Q++L               
Sbjct: 1382 AHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQXXXXXXXXXXGQAR 1441

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLEQ 268
                 ER   +   E+R    + +   R       E         E     ++   + E+
Sbjct: 1442 QAEAAERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAER 1501

Query: 269  NQRTFADEMSKLTILEKTREQKT 291
             +R   DE  +    E     + 
Sbjct: 1502 LRRQVQDESQRKRQAEAELALRV 1524



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1554 RLRQAEVERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1613

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1614 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1673

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1674 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1729

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1730 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1762



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1459 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1512

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1513 KRQAEAE--LALRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1570

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1571 ETAQRSA--EVELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1628

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1629 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1660



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 63/204 (30%), Gaps = 12/204 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E T L    ++++K      +  +   +    +   LE       EQ            +
Sbjct: 1847 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLE-------EQAAQHKADIEERLA 1899

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYL---NRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            ++     S + R   +    +R         L L+       A  +  + +L  +++  E
Sbjct: 1900 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAE 1959

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                S+     +     +   E  +   E +  ++      +EA  +    L+E+ R   
Sbjct: 1960 DTLRSKEQAELEAARQRQLAAEEEQRRREAEERVQKSLAAEEEAARQRKAALEEVERLKA 2019

Query: 268  --QNQRTFADEMSKLTILEKTREQ 289
              +  R   +   + +  +    Q
Sbjct: 2020 KVEEARRLRERAEQESARQLQLAQ 2043


>gi|237726488|ref|ZP_04556969.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229435014|gb|EEO45091.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 355

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 7/81 (8%)

Query: 39  PIEISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
            I+  VS+  +  +     V   +        SG I K  V++G+++ +G  L   +  +
Sbjct: 33  KIDTIVSADKQTFLQFPGKVKAAQDISLAFRVSGTISKIHVKDGTRVQEGQLLAELDPTD 92

Query: 92  TTDLIDLKKVSIKNLRCHIDT 112
               +D  +   + ++   + 
Sbjct: 93  YQVQLDATEAEYQQIKAEAER 113


>gi|254419087|ref|ZP_05032811.1| auxiliary transport protein, MFP family, putative [Brevundimonas
           sp. BAL3]
 gi|196185264|gb|EDX80240.1| auxiliary transport protein, MFP family, putative [Brevundimonas
           sp. BAL3]
          Length = 384

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/329 (13%), Positives = 99/329 (30%), Gaps = 29/329 (8%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            +++    N+R  I      L+    +  V +    +    L     + +    +     
Sbjct: 70  SIERTENANVRGQITVISPQLNGYIAEVLVADFQPVAAGTPLFRIDDRIYRQRLEQTRAT 129

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +++    L        S        +   +   A L+  + D+  + +L    +VS  + 
Sbjct: 130 LAAREADLANSAQTGASRRATVGARDADIASAEAQLTRARADMVRVADLAADGSVSLRER 189

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           +Q E  +  +   +R+    ++  L                  + +              
Sbjct: 190 DQAEATLKSAQAAVRQAQAGREVAL---------------QDERSVGVSRHGLVAAVEGA 234

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + + + E       I +P AG +    +     Y      L+ +VP     ++ A    
Sbjct: 235 QAAVRLAEIDLANTVITAPEAGRVGQVGAR-RGQYVTAGSQLVSLVPP--QLWVIANFKE 291

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI-- 390
           +Q   + +G  ATV      D +   F+  I++I P    +         T  + +V   
Sbjct: 292 RQAGRMVEGQAATVTIDALGDRQ---FRGRIQQISPATGSEFAVLPAQNATGNFTKVAQR 348

Query: 391 --LKITDLAFSDNNIELRNGFPAEVLFTA 417
             ++I      +    LR G         
Sbjct: 349 LPVRIALDPGQEGLQRLRPGMSVVARVDT 377



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/295 (11%), Positives = 85/295 (28%), Gaps = 10/295 (3%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR  P +     +L++  ++ ++    L P   S+  +        +  I    +G I +
Sbjct: 37  KRKLPVAALITAILAVAAVLLILFAWKLPPFTSSIERTENANVRGQITVISPQLNGYIAE 96

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V +   +  GTPL   +D      ++  + ++      +                 + 
Sbjct: 97  VLVADFQPVAAGTPLFRIDDRIYRQRLEQTRATLAAREADLANSAQTGASRRATVGARDA 156

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              S E QL               +  +S   R       +     + +     + +L  
Sbjct: 157 DIASAEAQLTRARADMVRVADLAADGSVSLRERDQAEATLKSAQAAVRQAQAGREVALQD 216

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV----YKSTLELRENIHEQKNMLRHIN 245
                  +   +      + AV   +++    ++         ++     +       + 
Sbjct: 217 ERSVGVSRHGLVAAVEGAQAAVRLAEIDLANTVITAPEAGRVGQVGARRGQYVTAGSQLV 276

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI--LSPIAG 298
            L        AN+ +  +  + + Q         +  L   + +  I  +SP  G
Sbjct: 277 SLVPPQLWVIANFKERQAGRMVEGQAATVT----IDALGDRQFRGRIQQISPATG 327


>gi|109081258|ref|XP_001092704.1| PREDICTED: cingulin-like 1 [Macaca mulatta]
          Length = 1302

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 13/204 (6%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            + +      +  +   +R  +  E++  + L  + + LE+     + Q+ D  G      
Sbjct: 806  LASRSNTSEQDQAGTEMRVKLLQEEN--EKLQGRSEELEQRVAQLQRQIEDLKGDEAKAK 863

Query: 150  S--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               K +   I  +  +L       +     R  LEN+    +  LS   ++   +    +
Sbjct: 864  ETLKKYEGEIRQLEEALVQARREEKEAVSARRALENELEAAQRNLSRTTQEQKQLSEKLK 923

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI----S 263
            + +  +  L + +  +      L + I + +  +  I E    + LE  N L E      
Sbjct: 924  EESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADIVEASRTSTLELQNQLDEYKEKNR 983

Query: 264  RDLEQNQRTFAD-----EMSKLTI 282
            R+L + QR   +     E S+LT 
Sbjct: 984  RELAEMQRQLKEKTLEAEKSRLTA 1007



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 77/209 (36%), Gaps = 4/209 (1%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ED E   LI+    + ++L+  +  ++   D L  +   L     + +E++     + 
Sbjct: 719 RSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRERELTALKGALKEEVSSH-DQE 777

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                + ++  + ++  S++     +  +       E   +     +   Q++   ++  
Sbjct: 778 MDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSEQDQAGTEMRVKLLQEENEKLQGR 837

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY---LKEI 262
            E+       L +Q   +     + +E + + +  +R + E   +A  E        + +
Sbjct: 838 SEELEQRVAQLQRQIEDLKGDEAKAKETLKKYEGEIRQLEEALVQARREEKEAVSARRAL 897

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +LE  QR  +    +   L +  ++++
Sbjct: 898 ENELEAAQRNLSRTTQEQKQLSEKLKEES 926



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 73/224 (32%), Gaps = 3/224 (1%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+N   I +    +     E     + K      L+  ++  +  L     +   ++
Sbjct: 631 QLGVKNQQNIKEERERMRANLEELRSQHNKKVEENSTLQQRLEESEGELRKNLEELFQVK 690

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E  + ++ D   +      +  +    S  R     +  +     +  DL       
Sbjct: 691 MEREQHQTEIRDLQDQLSEMHDE-LDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQ 749

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             LL   +++LT +K   ++   S   ++++ +         LRE++ E    +  +   
Sbjct: 750 EDLLRKRERELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASR 809

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            + +  + A     + + L++          +L       +++ 
Sbjct: 810 SNTSEQDQAGTEMRV-KLLQEENEKLQGRSEELEQRVAQLQRQI 852



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 74/209 (35%), Gaps = 10/209 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++ +  +  +L ++  +     ++ EKS L  +      ++      EE+L D+    
Sbjct: 974  QLDEYKEKNRRELAEMQRQLKEKTLEAEKSRLTAMK-----MQDEMRLMEEELRDYQRAQ 1028

Query: 146  HS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                T  ++    +  +   L+ K             +E+K S L   L   +++     
Sbjct: 1029 DEALTKRQLLEQTLKDLEYELEAKSHLKDDRSRLVKQMEDKVSQLEMEL---EEERNNSD 1085

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+ + S+  + Q    + +     ++   ++ ++ R   +L         +Y     
Sbjct: 1086 LLSERISRSREQMEQVRNELLQERAARQDLECDKISLERQNKDLKSRIIHLEGSYRSSKE 1145

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + Q +   A+   +L   E+ R    +
Sbjct: 1146 GLVVQMEARIAELEDRLESEERDRASLQL 1174


>gi|317052087|ref|YP_004113203.1| RND family efflux transporter MFP subunit [Desulfurispirillum
           indicum S5]
 gi|316947171|gb|ADU66647.1| efflux transporter, RND family, MFP subunit [Desulfurispirillum
           indicum S5]
          Length = 448

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 66/195 (33%), Gaps = 25/195 (12%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGII-----GLITWSIL-----------------LPIEI 42
           M + ++       +R   L + G++     G  +W  +                   IE 
Sbjct: 1   MNREMQSRRWRPSRRALFLVLPGLVLLAGAGYFSWQHMFSNQKGQQAWSIAQVQKGNIEN 60

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            V+++G +    N V++ +  SG ++K  VE G+Q+ QG  L   +       +D  +  
Sbjct: 61  LVTATGTLQP-RNYVDVGAQVSGQMQKIHVEVGTQVQQGELLAEIDPTLFVAKVDATRAQ 119

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           ++     +   ++ L    N Y   +           +      S  S      I  +  
Sbjct: 120 LRYQLAQLRDREAQLILAENHYRRQKNLLAEDATTEENVQNAEASLLSA--RAQIEMLRA 177

Query: 163 SLKMKLTRMRSIYLN 177
            +    + +RS   +
Sbjct: 178 QIDQTESTLRSDEAS 192



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 74/208 (35%), Gaps = 17/208 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q      +    ++ L L EN + ++  L   +   +E        L      +E  + 
Sbjct: 118 AQLRYQLAQLRDREAQLILAENHYRRQKNLLAEDATTEENVQNAEASLLSARAQIEMLRA 177

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLT 328
                 S L   E +     I +P+ GT+V             SQ    +++I       
Sbjct: 178 QIDQTESTLRSDEASLNYAMIYAPMDGTVVSVSVR-QGQTINASQQAPTILRIA-DLSTM 235

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            ++ +V+   +  ++    A   F      + +++   + +++P  + ++N +     Y 
Sbjct: 236 TVQTQVSEADVSKLRMDMEAY--FTTLG-SQGRRWYGRLHRVEPTPTVENNVVL----YN 288

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFT 416
            +  +T     + N EL     A+V F 
Sbjct: 289 ALFDVT-----NANRELLPQMTAQVFFV 311


>gi|312113275|ref|YP_004010871.1| efflux transporter RND family, MFP subunit [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311218404|gb|ADP69772.1| efflux transporter, RND family, MFP subunit [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 364

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 70/190 (36%), Gaps = 18/190 (9%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           E          L  +   E A    E  + L+Q     A   + + + E    Q+TI +P
Sbjct: 118 ETAKAKLEFARLQFDRAQELAPKGAESRQMLQQRAAELAQGEAAVRLAEARLTQRTIRAP 177

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            AG  +  +  +   Y    +PL+ +       Y+   +  +++  +  G   +VR   +
Sbjct: 178 FAGR-LGVRRVNLGQYVNAGEPLVTLTALD-RLYVNFTLPQQELSKLANGGKVSVRTDAW 235

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF--PAEV 413
            +     F+A I  I+P+++ +  N+  Q               + +  LR G    A+V
Sbjct: 236 PER---DFEARINAIEPVVAAETRNISVQ-----------ATLGNADGALRPGLYVTAKV 281

Query: 414 LFTAKNTTLA 423
           +   +   + 
Sbjct: 282 ILPPRARAIL 291



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 52/188 (27%), Gaps = 4/188 (2%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           N V I    +G +     E G ++  G  LL   D      ++  K  ++  R   D   
Sbjct: 76  NEVTIAPEVAGRVIAIDFEAGVEVAAGAELLRLYDAPERADLETAKAKLEFARLQFDR-- 133

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
                L  K     +  + R  +L           +++    I + +             
Sbjct: 134 --AQELAPKGAESRQMLQQRAAELAQGEAAVRLAEARLTQRTIRAPFAGRLGVRRVNLGQ 191

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
           Y+N  +     + L  L  +       +  L     VS       ER        +   +
Sbjct: 192 YVNAGEPLVTLTALDRLYVNFTLPQQELSKLANGGKVSVRTDAWPERDFEARINAIEPVV 251

Query: 235 HEQKNMLR 242
             +   + 
Sbjct: 252 AAETRNIS 259


>gi|220934781|ref|YP_002513680.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219996091|gb|ACL72693.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 372

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/210 (10%), Positives = 71/210 (33%), Gaps = 5/210 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI+++ + +NG+++  G  LL  +D   +D   L+ +        ++ +++    L  +
Sbjct: 77  GGIVREIRFQNGARVEAGQVLLVLDD--ESDQARLRSLEAAQRLADLELQRAR--RLAAQ 132

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++ E     RE +    +   +   +++    + + +             +L+  D   
Sbjct: 133 NNISEAELTRRESEAEQAIAAVNEQRARIRQKSVRAPFSGDLGIRQVNVGQFLSAGDPVV 192

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               +  +          +  +  +  V+   ++   R V      +   +      LR 
Sbjct: 193 SLQSVDPIYLDFSLPERRIGEIRREQTVN-VRVDALGREVQGRVNAIEPAVSASTRTLRV 251

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTF 273
              L ++     A     +  +  + ++  
Sbjct: 252 QATLDNKDGSLRAGMFGRVRLETGEPEQRV 281



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 73/217 (33%), Gaps = 24/217 (11%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---- 264
             V +       R+     L + ++  +Q   LR +      A+LE     +  ++    
Sbjct: 78  GIVREIRFQNGARVEAGQVLLVLDDESDQAR-LRSLEAAQRLADLELQRARRLAAQNNIS 136

Query: 265 --DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
             +L + +      ++ +        QK++ +P +G  +  +  +   +     P++ + 
Sbjct: 137 EAELTRRESEAEQAIAAVNEQRARIRQKSVRAPFSGD-LGIRQVNVGQFLSAGDPVVSLQ 195

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                 Y+   +  ++I  +++  T  VR         ++ +  +  I+P +S     L+
Sbjct: 196 -SVDPIYLDFSLPERRIGEIRREQTVNVRVDALG----REVQGRVNAIEPAVSASTRTLR 250

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            Q               + +  LR G    V      
Sbjct: 251 VQ-----------ATLDNKDGSLRAGMFGRVRLETGE 276


>gi|150006604|ref|YP_001301348.1| putative lipoprotein [Bacteroides vulgatus ATCC 8482]
 gi|149935028|gb|ABR41726.1| putative lipoprotein [Bacteroides vulgatus ATCC 8482]
          Length = 355

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 7/81 (8%)

Query: 39  PIEISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
            I+  VS+  +  +     V   +        SG I K  V++G+++ +G  L   +  +
Sbjct: 33  KIDTVVSADKQTFLQFPGKVKAAQDISLAFRVSGTISKIHVKDGARVQEGQLLAELDPTD 92

Query: 92  TTDLIDLKKVSIKNLRCHIDT 112
               +D  +   + ++   + 
Sbjct: 93  YQVQLDATEAEYQQIKAEAER 113


>gi|119602580|gb|EAW82174.1| plectin 1, intermediate filament binding protein 500kDa, isoform
            CRA_d [Homo sapiens]
          Length = 2483

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 59/199 (29%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1329 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1388

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++    +    +  +++ K+    A   S  +    ++       
Sbjct: 1389 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR------- 1441

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1442 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1500

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1501 VELASRVKAEAEAAREKQR 1519



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2169 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2224

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2225 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2284

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2285 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2344

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2345 EETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2388



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++        +  ++ LR   + E   +     + +  E++    EE++     +  +T 
Sbjct: 1395 VDAQQQKRSIQEELQQLRQSSEAE---IQAKARQAEAAERSRLRIEEEIRVVRLQLEATE 1451

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +            L+    R       +   + ++  LR  +    +     +      
Sbjct: 1452 RQ-----RGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASR 1506

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQ 268
              ++ +  ++++   ++  ELR    E +  LR    E   +  +      +    +L+ 
Sbjct: 1507 VKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQS 1566

Query: 269  NQRTFADEMSKLT 281
             + +FA++ ++L 
Sbjct: 1567 KRASFAEKTAQLE 1579



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2218 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2277

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2278 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2337

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2338 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2397

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2398 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2428



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 6/148 (4%)

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +     ++            ++  L + R +       + ++      L    ++  + +
Sbjct: 1331 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1390

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                       D  QQ+R + +   +LR++   +        E  + + L     ++ + 
Sbjct: 1391 EEAA------VDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR 1444

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
              LE  +R       +L  L    E+  
Sbjct: 1445 LQLEATERQRGGAEGELQALRARAEEAE 1472



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1626 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1685

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1686 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1742

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1743 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1794

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1795 LAEEAKRQRQLAEED 1809



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 54/183 (29%), Gaps = 8/183 (4%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + F++     +E+     E+Q  +   +     + +      +   +         +  L
Sbjct: 1320 IKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKEL 1379

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-------QERIVYKSTLE 229
             +   E       A + + Q+  ++ + L +    S+ ++          ER   +   E
Sbjct: 1380 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1439

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +R    + +   R       E         +E      Q Q        ++    + + Q
Sbjct: 1440 IRVVRLQLEATERQRGGAEGELQA-LRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQ 1498

Query: 290  KTI 292
              +
Sbjct: 1499 AEV 1501



 Score = 40.0 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 50/158 (31%), Gaps = 3/158 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2306 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2365

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL R+  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2366 AEAERLKL-RVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2423

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN 257
            R       E LRE I E +     + +      L+   
Sbjct: 2424 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEE 2461



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1537 RLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1596

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1597 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1656

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1657 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1712

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1713 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1745



 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1442 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1495

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1496 KRQAEVE--LASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1553

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1554 ETAQRSA--EAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1611

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1612 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1643


>gi|50086113|ref|YP_047623.1| HlyD family secretion protein [Acinetobacter sp. ADP1]
 gi|49532089|emb|CAG69801.1| putative secretion protein (HlyD family) [Acinetobacter sp. ADP1]
          Length = 450

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 55/155 (35%), Gaps = 10/155 (6%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +E +V ++G +     ++ + +  SG +KK  V+ G ++ QG  +   +     +
Sbjct: 41  ANYGNLENTVLATGTLDA-TKLISVGAQVSGQVKKMYVQLGDEVKQGQLIAQIDSTTQEN 99

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +     +I+NL      +++ L+         E     R +Q +           +   
Sbjct: 100 SLKTADANIRNLEAQRLQQEANLN---------EAQLAYRRQQQMFAQDATSKAELESAE 150

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               +    +K    ++ S  + R   +      R
Sbjct: 151 ATYKTAQAQIKAINAQIESAKVTRSTAQTNIGYTR 185



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 89/269 (33%), Gaps = 27/269 (10%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  +++        +L  E K   L A + S  ++ ++      K A +     + +R+
Sbjct: 63  SVGAQVSGQVKKMYVQLGDEVKQGQLIAQIDSTTQENSL------KTADANIRNLEAQRL 116

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL-KEISRDLEQNQRTFADEMSKLT 281
             ++ L     +  ++       +   +A LE A    K     ++             +
Sbjct: 117 QQEANLN-EAQLAYRRQQQMFAQDATSKAELESAEATYKTAQAQIKAINAQIESAKVTRS 175

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQI 339
             +       I++P  GT+V             +Q    IV  +  +   I+A+V+   I
Sbjct: 176 TAQTNIGYTRIVAPTDGTVVAI-VTEEGQTVNANQSAPTIVKIAKLQNMTIKAQVSEADI 234

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE---------YYEVI 390
             V+KG      F    D +++       +  P     ++   +           YY  +
Sbjct: 235 MKVEKGQQVY--FTTLGDDKKRYATLRQIEPAPDSISSESTTSSTSSSSSSSTAIYYNAL 292

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +      + + +LR    A+V     +
Sbjct: 293 FDVP-----NEDGKLRIDMTAQVYIVLDS 316


>gi|255593609|ref|XP_002535911.1| Cobalt-zinc-cadmium resistance protein czcB, putative [Ricinus
           communis]
 gi|223521556|gb|EEF26471.1| Cobalt-zinc-cadmium resistance protein czcB, putative [Ricinus
           communis]
          Length = 357

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 93/258 (36%), Gaps = 20/258 (7%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           KA E   +     + +   T +KV    I          L     +      +E K S +
Sbjct: 49  KADEDLIKLSPAEIQQSGVTIAKVAKQPIQDQLSFTANILANQNKLAHVTPRIEGKLSKV 108

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            A L  H K     + L E ++V   +   Q R         + ++   +     I++LY
Sbjct: 109 IANLGDHVKTG---QTLAEIDSVPMGEARAQFRSS-------KTDLTLAQANFDRISKLY 158

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL----EKTREQKTILSPIAGTIVYNQ 304
           ++  +    ++ E    LE+ +     +  +L +     +++     + +P  G ++   
Sbjct: 159 EDKVVPQKQFI-ESQSALERAKSALYADSERLRMYGGLDQQSGSTYLLKAPFNGIVIEKN 217

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +      A  +  +  I       +I A V  + +Q+++ G TA+V    Y D     F 
Sbjct: 218 AV-IGELANPADTIFTIA-DMSTVWIDADVPERDLQYLEVGKTASVTVTAYPDE---VFN 272

Query: 365 AIIEKIDPIISQQDNNLQ 382
             +  +  ++ +    ++
Sbjct: 273 GKVSYLSSVVDKTTRTVK 290


>gi|206580930|ref|YP_002240677.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|206569988|gb|ACI11764.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
          Length = 355

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 7/207 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
                  L+ ++ ++    W +L P    +   SS+G I   +  V+I S  +G I    
Sbjct: 5   KKRWAGYLVGLLVVLAAAAWWLLRPPGLPDGFASSNGRIEATE--VDIASKIAGRIDTIL 62

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + QG  L   +     +        IK     +   ++ LD   ++    E   
Sbjct: 63  VKEGQFVRQGEVLARMDTRVLNEQRLEAAAQIKEAESAVLAARALLDQRQSEMRASEAVV 122

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           + R+ +L     ++    S   +   +   + L        S        + + S  RA 
Sbjct: 123 KQRQAELDSSAKRH--VRSNALSQRGAVSAQQLDDDRAAAESARAALESAKAQVSAARAA 180

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           + + +  +   +   E    ++  +  
Sbjct: 181 IEAARTSIIQAQTRVEAAQATERRILA 207


>gi|188581611|ref|YP_001925056.1| phytochrome sensor protein [Methylobacterium populi BJ001]
 gi|179345109|gb|ACB80521.1| putative phytochrome sensor protein [Methylobacterium populi BJ001]
          Length = 627

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 71/217 (32%), Gaps = 29/217 (13%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD---LEQNQRTFADEMSKLTI 282
              +L   + ++   L  +  + +     +       +R    +   +       +++ +
Sbjct: 419 RKGDLLAALEDRDLALERLRWVTERQQRTYEYDKALATRQPATINVVKSQIDQAEAQIRL 478

Query: 283 LEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHSK---LTYIRAKVTPKQ 338
           L++   +    +P  G IV  + S S      + Q L +I P      +  +  +V    
Sbjct: 479 LDEQIARSKFTAPFDGLIVSGDLSQSIGGAVSRGQVLFEIAPLDSYRVVLSVDERV---- 534

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  + +G T  +      D  +      I+ I P+          +  + V     +   
Sbjct: 535 IADLHEGQTGHMLATSLPDQPQALM---IQTITPVA----EAKNGRNLFRV-----EGRI 582

Query: 399 SDNNIELRNGFP--AEVLFTAKNTTLAQEII-HPITD 432
           +D    LR G    A+V     +  L   I   PI D
Sbjct: 583 ADGATRLRPGMEGIAKVDV---DRRLLAWIWARPIVD 616


>gi|89054688|ref|YP_510139.1| secretion protein HlyD [Jannaschia sp. CCS1]
 gi|88864237|gb|ABD55114.1| secretion protein HlyD [Jannaschia sp. CCS1]
          Length = 446

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/349 (11%), Positives = 98/349 (28%), Gaps = 35/349 (10%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR--CHIDTEKSALDFLNNKYDVLEK 129
           V++G        L++     +   +    V ++       +    S          +   
Sbjct: 52  VDDGVAPAADDGLISVVVRRSEAQVTENAVQLRGRTEALRLVDVASETSGRIISTPIRAG 111

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           AF +  + + +       T  +     +      +     R+        +     +   
Sbjct: 112 AFVNAGQVMCEIDPGTSQTALEEAMARLGEAEARVPEAEARVPEAQARLPEARALLAQAE 171

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L+S + D      L E    S          V  +   +   +   +     +     
Sbjct: 172 AQLTSAEIDGNAATRLAESGFGSDTRAASATAGVAAAEAGVESAMAAVQGAQAGVQGA-- 229

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                           ++          + +T  E+  EQ TI +P +G  +   +    
Sbjct: 230 -------------EAGVQSALAGVRAAEAAVTRAEEAIEQLTIRAPFSGL-LETDTAELG 275

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              Q       I+       +   V   Q+  ++ G TA  +         ++ +  +  
Sbjct: 276 ALMQPGTICATII-QLDPIKLVGFVPEAQVDRIRVGATAGAQLAS-----GQQVQGEVTF 329

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +     ++         + V + +      ++N+E+R+G  A++L    
Sbjct: 330 LSRSADERTRT------FRVEITVP-----NSNLEIRDGQTADILVRTD 367



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 18/190 (9%), Positives = 57/190 (30%), Gaps = 3/190 (1%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            +V++ S  SG I    +  G+ +  G  +   +   +   ++     +      +   +
Sbjct: 91  RLVDVASETSGRIISTPIRAGAFVNAGQVMCEIDPGTSQTALEEAMARLGEAEARVPEAE 150

Query: 115 SALDFLNNKYDVLEKAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           + +     +           E QL   +  G   +  ++      +    +         
Sbjct: 151 ARVPEAQARLPEARALLAQAEAQLTSAEIDGNAATRLAESGFGSDTRAASATAGVAAAEA 210

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +      ++   + ++   +  Q  L  ++   E       +  +Q  I    +  L  
Sbjct: 211 GVESAMAAVQGAQAGVQGAEAGVQSALAGVRA-AEAAVTRAEEAIEQLTIRAPFSGLLET 269

Query: 233 NIHEQKNMLR 242
           +  E   +++
Sbjct: 270 DTAELGALMQ 279


>gi|89095955|ref|ZP_01168849.1| hypothetical protein B14911_04459 [Bacillus sp. NRRL B-14911]
 gi|89089701|gb|EAR68808.1| hypothetical protein B14911_04459 [Bacillus sp. NRRL B-14911]
          Length = 434

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 84/252 (33%), Gaps = 10/252 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    ++ ++S  G  + +       S   G   KF V+ G ++  GTPL  +E +    
Sbjct: 65  AAQGDLKETLSKPGVAIPQSEYPVYFSEEDGTFSKFLVKPGDKVTPGTPLYEYESVNLDR 124

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA----FESREEQLLDFLGKYHSTCS 150
             +  +  I+ L   ID+ ++ +  LNN    LE          E++  D     H T  
Sbjct: 125 DRNRIESEIEQLTNQIDSVQNHISSLNNYLSALEAEQAYTSTDAEKEEKDLSVSIHDTEK 184

Query: 151 KVFNYGISS-VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           ++    + + +    + K          +  + +  S +   + S  +DL     +    
Sbjct: 185 EILLQELEADLLEDERDKYEEQLDYVNEQTGVMSYLSEIEGQIVSISEDLDNPVLMIRSE 244

Query: 210 AVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS----R 264
           A + +  L+++E        E        K                  +   + S     
Sbjct: 245 AAAVKGKLDEKELQKVVQGQETAVESGTLKKDFTGRVASVQTMPETPLSTETQASYPFTV 304

Query: 265 DLEQNQRTFADE 276
           +L+Q Q    + 
Sbjct: 305 ELDQAQEKLENL 316



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 80/228 (35%), Gaps = 22/228 (9%)

Query: 204 NLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            L+E  +V     +N +  +   +      ++ +I    N L  +       + +     
Sbjct: 113 PLYEYESVNLDRDRNRIESEIEQLTNQIDSVQNHISSLNNYLSALEAEQAYTSTDAEKEE 172

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTR----EQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           K++S  +   ++    +  +  +LE  R    EQ   ++   G + Y            S
Sbjct: 173 KDLSVSIHDTEKEILLQELEADLLEDERDKYEEQLDYVNEQTGVMSYLSEI-EGQIVSIS 231

Query: 316 Q----PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +    P++ I   S+   ++ K+  K++Q V +G    V     +   +K F   +  + 
Sbjct: 232 EDLDNPVLMI--RSEAAAVKGKLDEKELQKVVQGQETAVE----SGTLKKDFTGRVASV- 284

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             + +   + +TQ  Y   +++        N  L  G    V  T   
Sbjct: 285 QTMPETPLSTETQASYPFTVELDQAQEKLEN--LHPGMQLNVEITTGE 330


>gi|329120021|ref|ZP_08248693.1| acriflavin resistance protein A [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327463934|gb|EGF10248.1| acriflavin resistance protein A [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 157

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 44/139 (31%), Gaps = 7/139 (5%)

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGY 346
           +   I +PIAG +   +     +       ++ ++ P      I   +       +K G 
Sbjct: 13  DDMNIRAPIAGRV-EYKIAEVGSVVASGSKVVSLLDPTDVSMNI--FLPNHDAGRLKVGG 69

Query: 347 TATVRFPHYA--DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
            A +R          + KF A   +  P   + +N      + +V LKI     +  +  
Sbjct: 70  EARIRLDSVDAVFPAQIKFVATEAQFTPKSVETENERAKLMF-KVKLKIPADTAAKYSGL 128

Query: 405 LRNGFPAEVLFTAKNTTLA 423
           L+ G            T  
Sbjct: 129 LKGGMTGNGYVKTDANTAW 147


>gi|262274177|ref|ZP_06051989.1| hypothetical protein VHA_001153 [Grimontia hollisae CIP 101886]
 gi|262221987|gb|EEY73300.1| hypothetical protein VHA_001153 [Grimontia hollisae CIP 101886]
          Length = 370

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 39/115 (33%), Gaps = 7/115 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID------TEKSAL 117
            G +    V+ G  + +G PL+T +              ++ L   +D        +  L
Sbjct: 79  GGKVNALLVDVGDTVEKGQPLITLDTQLLNTEAQQLAAQLEQLNAQLDLVKTNLQRQRQL 138

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHST-CSKVFNYGISSVYRSLKMKLTRM 171
                  D    +  S+ + LL  + +  ++  S       S++Y     K++  
Sbjct: 139 KKKGFSADAETDSLISQRDALLANVRQLQASLASNKLRQEKSTIYAPYAGKISER 193


>gi|212692099|ref|ZP_03300227.1| hypothetical protein BACDOR_01594 [Bacteroides dorei DSM 17855]
 gi|237709038|ref|ZP_04539519.1| multidrug resistance protein MexA [Bacteroides sp. 9_1_42FAA]
 gi|237724627|ref|ZP_04555108.1| multidrug resistance protein MexA [Bacteroides sp. D4]
 gi|265755535|ref|ZP_06090156.1| multidrug resistance protein MexA [Bacteroides sp. 3_1_33FAA]
 gi|212665491|gb|EEB26063.1| hypothetical protein BACDOR_01594 [Bacteroides dorei DSM 17855]
 gi|229436822|gb|EEO46899.1| multidrug resistance protein MexA [Bacteroides dorei 5_1_36/D4]
 gi|229457100|gb|EEO62821.1| multidrug resistance protein MexA [Bacteroides sp. 9_1_42FAA]
 gi|263234141|gb|EEZ19734.1| multidrug resistance protein MexA [Bacteroides sp. 3_1_33FAA]
          Length = 383

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 71/191 (37%), Gaps = 15/191 (7%)

Query: 55  NVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +V  I+         G ++K  V+ G ++ +G PL      + ++ +   + + K  +  
Sbjct: 54  DVQAIQFVEIKPKVEGFVQKIYVDEGQKVKKGQPLFQLSSDQYSETVKEAQANYKQAQAQ 113

Query: 110 IDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            +    E   +  L +K  + +   +   ++      K     +++    +   Y ++  
Sbjct: 114 YEMANYEAERIGRLVDKQILSKIRLDQANKEKEVAQMKVEQAKAQMQRSQMDYSYTTITA 173

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                   Y++R+  +  S +    L +   D++    +F    V++++  + +R     
Sbjct: 174 PFDG----YIDRIPYKTGSLVNPQSLLTTVSDIS---EIFAYYKVNESEYLEYKRQQLSG 226

Query: 227 TLELRENIHEQ 237
             +  EN  E 
Sbjct: 227 QKQHEENNVEL 237



 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 21/134 (15%)

Query: 208 KNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +  V +  +++ +++     L +L  + + +       N    +A  E ANY  E    L
Sbjct: 68  EGFVQKIYVDEGQKVKKGQPLFQLSSDQYSETVKEAQANYKQAQAQYEMANYEAERIGRL 127

Query: 267 EQ------------------NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                                Q       +++   +      TI +P  G I      + 
Sbjct: 128 VDKQILSKIRLDQANKEKEVAQMKVEQAKAQMQRSQMDYSYTTITAPFDGYIDRIPYKT- 186

Query: 309 SNYAQQSQPLMKIV 322
            +     Q L+  V
Sbjct: 187 GSLVNP-QSLLTTV 199


>gi|148359665|ref|YP_001250872.1| chemiosmotic efflux system protein B-like protein [Legionella
           pneumophila str. Corby]
 gi|148281438|gb|ABQ55526.1| Chemiosmotic efflux system protein B-like protein [Legionella
           pneumophila str. Corby]
          Length = 322

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 16/118 (13%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +PIAG I   ++ +     + +  L  I  +     + A+V  + +  VK G    VR
Sbjct: 128 VNAPIAGII-DARNINLGQAVEPNTVLFHIS-NRDKLLVVAQVYEEDLGKVKVGQEVNVR 185

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              Y          ++  I+P +      +       V + + +         L+ G 
Sbjct: 186 VLSYPKQTFP---GLVTLIEPNLDPLTRTVN------VRITLDNKERL-----LKPGM 229


>gi|194366031|ref|YP_002028641.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194348835|gb|ACF51958.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 294

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 52/165 (31%), Gaps = 6/165 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV + S   G++ +  V +  ++  G  LL  +       ++    ++ + R  + 
Sbjct: 43  VRADVVRVASDMGGLVTQVLVHDNQRVSAGQLLLVLDQPRFAAALEKADAAVSSARATLA 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +      N   +++      R         K  +  + +           L ++ T +
Sbjct: 103 LARRESTRDNALGNLVASETRERNA------AKVDTELAALAQARAEQRVAQLNVQRTEV 156

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           R+     +   +  +       +    L   ++L  +    +  L
Sbjct: 157 RATTDGIITNLDLHAGDYLQPGAQALALIDTRSLRIEGYFEETKL 201



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 57/206 (27%), Gaps = 24/206 (11%)

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +           R         NL  +   +  +  ++      A   ++  + +   ++
Sbjct: 94  VSSARATLALARRESTRDNALGNLVASETRERNAAKVDTELAALAQARAEQRVAQLNVQR 153

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +   G I      +  +Y Q     + ++  ++   I       ++  + +G  A 
Sbjct: 154 TEVRATTDGIITNLDLHA-GDYLQPGAQALALI-DTRSLRIEGYFEETKLACITEGDAAV 211

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNN------LQTQEYYE---------VILKIT 394
            R         +  +  ++ I   I+    +            Y          V + I 
Sbjct: 212 ARLMGDD----RDVRGHVDTIAAGIADDQRSSTHNLLPAVASTYTWVRLAQRIPVRIHID 267

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNT 420
           D   +  +  L  G  A V  T    
Sbjct: 268 D---APPDTRLIVGRTANVTITPSAR 290


>gi|307129445|ref|YP_003881461.1| putative Co/Zn/Cd efflux system membrane fusion protein [Dickeya
           dadantii 3937]
 gi|306526974|gb|ADM96904.1| Probable Co/Zn/Cd efflux system membrane fusion protein [Dickeya
           dadantii 3937]
          Length = 379

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 2/114 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   N V+I+S  +G +K  + + G  + QG  L T +D      +     S    R  +
Sbjct: 67  VVSLNQVDIQSQITGTVKSVEFKEGDVVHQGQLLFTLDDNTQQTTLHRAVASQAESRSLL 126

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           D  K+  D    +    +    + +   L    + +          I S    L
Sbjct: 127 D--KAQRDLNRGRALKAQNYISASDWDALQSARQQYDAQFNAARDDIRSAQAQL 178



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 71/229 (31%), Gaps = 12/229 (5%)

Query: 157 ISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           + +  +SL + L      + LN++D++++ +     +   + D+     L          
Sbjct: 50  VPAQVKSLPLTLATQGHVVSLNQVDIQSQITGTVKSVEFKEGDVVHQGQLLFT-LDDNTQ 108

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                R V  S  E R  + + +  L     L  +  +  +++   +    +Q    F  
Sbjct: 109 QTTLHRAVA-SQAESRSLLDKAQRDLNRGRALKAQNYISASDWDA-LQSARQQYDAQFNA 166

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL-MKIVPHSKLTYIRAKV 334
               +   +       I +P+ G           +  Q    L +  V       +   +
Sbjct: 167 ARDDIRSAQAQLGYTRIYAPVNGKTGALNVH-PGSLVQPGSSLPLVTVSQFDPIGVSFTL 225

Query: 335 TPKQIQHVKKGY---TATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             K +  V          V      + +    + +++ I+  +S +   
Sbjct: 226 PEKDLNPVLAAQAQGPVRVWV---NNAKGPAVEGVLDFINNTVSTESGT 271


>gi|298291196|ref|YP_003693135.1| efflux transporter RND family, MFP subunit [Starkeya novella DSM
           506]
 gi|296927707|gb|ADH88516.1| efflux transporter, RND family, MFP subunit [Starkeya novella DSM
           506]
          Length = 451

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 77/253 (30%), Gaps = 36/253 (14%)

Query: 169 TRMRSIY-LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
            +MR +  L R   +      RA L + +        L +  A +Q  L++  R V    
Sbjct: 160 AQMRQMQELTRPAADEALKQARANLDNAKSAFERADRLAKSGAGTQATLDEAMRAVN--- 216

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                        L    EL    +    +        L+Q +   A   ++L       
Sbjct: 217 ---------VAQALTRTAELQVYTSSPGGSDYVMAQTQLDQARANLATARARLGYA---- 263

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
              TI +P  G ++  ++       Q    L+ + P   +  +  ++  K +  +K G  
Sbjct: 264 ---TITAPRDG-VLITRNVERGAVVQPGTSLLVLAPAGDIQLV-VQIDEKNLSLLKVGED 318

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           A      Y + R   F A +  I+P +                +++  L   D    LR 
Sbjct: 319 ALASADAYPEER---FAATLTYINPSVDIA----------RASVEV-KLTVPDPPDYLRQ 364

Query: 408 GFPAEVLFTAKNT 420
                V       
Sbjct: 365 DMTVSVDIAVDRR 377



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 60/196 (30%), Gaps = 21/196 (10%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI------- 90
             +  +V ++G +      VEI S  +G +K   VE G  + QG  L+  +         
Sbjct: 91  GELVRTVVATGHVETP-YRVEIGSQITGTVKDVLVEEGQTVRQGEALVVLDTTELDAAVV 149

Query: 91  -----------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
                      +   + +L + +                    + D L K+    +  L 
Sbjct: 150 QAVGAVAQAEAQMRQMQELTRPAADEALKQARANLDNAKSAFERADRLAKSGAGTQATLD 209

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMK--LTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           + +   +   +      +     S      +     +   R +L    + L     +  +
Sbjct: 210 EAMRAVNVAQALTRTAELQVYTSSPGGSDYVMAQTQLDQARANLATARARLGYATITAPR 269

Query: 198 DLTMMKNLFEKNAVSQ 213
           D  ++    E+ AV Q
Sbjct: 270 DGVLITRNVERGAVVQ 285


>gi|119602578|gb|EAW82172.1| plectin 1, intermediate filament binding protein 500kDa, isoform
            CRA_c [Homo sapiens]
          Length = 2524

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/199 (10%), Positives = 59/199 (29%), Gaps = 8/199 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1370 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1429

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     + +  +   ++    +    +  +++ K+    A   S  +    ++       
Sbjct: 1430 RREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR------- 1482

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            V +  L   ER    +  EL+      +       +  +EA         E  R   Q +
Sbjct: 1483 VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQAE 1541

Query: 271  RTFADEMSKLTILEKTREQ 289
               A  +       + +++
Sbjct: 1542 VELASRVKAEAEAAREKQR 1560



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2210 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2265

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2266 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2326 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2385

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2386 EETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEED 2429



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/193 (11%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            ++        +  ++ LR   + E   +     + +  E++    EE++     +  +T 
Sbjct: 1436 VDAQQQKRSIQEELQQLRQSSEAE---IQAKARQAEAAERSRLRIEEEIRVVRLQLEATE 1492

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +            L+    R       +   + ++  LR  +    +     +      
Sbjct: 1493 RQ-----RGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASR 1547

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQ 268
              ++ +  ++++   ++  ELR    E +  LR    E   +  +      +    +L+ 
Sbjct: 1548 VKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQS 1607

Query: 269  NQRTFADEMSKLT 281
             + +FA++ ++L 
Sbjct: 1608 KRASFAEKTAQLE 1620



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2259 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2318

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2319 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2378

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2379 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAE 2438

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2439 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2469



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 6/148 (4%)

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +     ++            ++  L + R +       + ++      L    ++  + +
Sbjct: 1372 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1431

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                       D  QQ+R + +   +LR++   +        E  + + L     ++ + 
Sbjct: 1432 EEAA------VDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR 1485

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
              LE  +R       +L  L    E+  
Sbjct: 1486 LQLEATERQRGGAEGELQALRARAEEAE 1513



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1667 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1726

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1727 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1783

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1784 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1835

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1836 LAEEAKRQRQLAEED 1850



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 54/183 (29%), Gaps = 8/183 (4%)

Query: 117  LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + F++     +E+     E+Q  +   +     + +      +   +         +  L
Sbjct: 1361 IKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKEL 1420

Query: 177  NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ-------QERIVYKSTLE 229
             +   E       A + + Q+  ++ + L +    S+ ++          ER   +   E
Sbjct: 1421 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1480

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +R    + +   R       E         +E      Q Q        ++    + + Q
Sbjct: 1481 IRVVRLQLEATERQRGGAEGELQA-LRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQ 1539

Query: 290  KTI 292
              +
Sbjct: 1540 AEV 1542



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 50/158 (31%), Gaps = 3/158 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2347 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2406

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL R+  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2407 AEAERLKL-RVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2464

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFAN 257
            R       E LRE I E +     + +      L+   
Sbjct: 2465 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEE 2502



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1578 RLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1637

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1638 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1697

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1698 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1753

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1754 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1786



 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1483 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1536

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1537 KRQAEVE--LASRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1594

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1595 ETAQRSA--EAELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1652

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1653 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1684


>gi|313230165|emb|CBY07869.1| unnamed protein product [Oikopleura dioica]
          Length = 1941

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 93/225 (41%), Gaps = 10/225 (4%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             G        L+T E ++     +   +S +N    +  E++       + +      E 
Sbjct: 1693 EGDLAQANDDLMTSERLKRAAQSERDDLSEEN--AALARERNTAQEEKRRLEARINEVEE 1750

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             +E++   + +     ++  N  +      L ++ +R++     ++ LE  +  LR  L+
Sbjct: 1751 EKEEVEMMVDEGEE-RNRRLNAQLDEAQSELSLEKSRVKQTESAKIALEKSNKELRQRLA 1809

Query: 194  SHQKDLTM-----MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
             ++ +        ++ +  K A ++++ +Q++R  Y  + ++R    + K+ L   +E  
Sbjct: 1810 EYESEKNSKVKAELEAVRAKLAAAEDERDQEQRARYDISKQVRRADKKIKDALSQADEER 1869

Query: 249  DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +      L++++  L  ++R  ADE  + T   +  ++K   
Sbjct: 1870 RQHDA-LKEQLEKLNSRLRASKRQ-ADEAEEETARIQGLKRKVQR 1912



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 69/205 (33%), Gaps = 23/205 (11%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  E  + +  K+  + +LR  +D +K  LD        L+  F+    +L +       
Sbjct: 1393 DKSEAVEKLRRKERDLDDLRTELDDQKLRLDNAERNRIRLQADFDDVHHELENQRN---- 1448

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                     +    R    +LT  R    +R   E +     A  ++  K  ++ + + E
Sbjct: 1449 -----LCVNLEKKQRQFDKQLTDERQTAAHRA--EERDQAQSAARAAEAKVFSLTREIEE 1501

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             N      + + ER       EL E    Q    R+++        +     + +   +E
Sbjct: 1502 LN----ERIEEVERQKRAQAAELEELASSQDGKQRNVH--------DLEKSKRTLEAQVE 1549

Query: 268  QNQRTFADEMSKLTILEKTREQKTI 292
            + +    +    L + E  + +  +
Sbjct: 1550 ELRTQMDELEDDLQLTEDAKLRLEV 1574



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 76/217 (35%), Gaps = 11/217 (5%)

Query: 86   TFEDIETTD-LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
              ++ E  +  I       K +   ++ +    +    K ++ + A + + ++L D   K
Sbjct: 937  KLDEEEEKNIEIRKNYEKTKAVNQELEEQLEEEETARQKLELEKAATDKKLKELGDENMK 996

Query: 145  YHSTCSKV------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ-- 196
                 +K+       +  ++ + ++L  +  R +++   +   E   + L   L   +  
Sbjct: 997  TSDKMTKLAREKAALDARLNELQQNLSGEEGRAKALEKAKAKYEGTIAELDERLKREEKA 1056

Query: 197  --KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
              +     + L  +    +  + + ER V     +L     E   +   ++    E    
Sbjct: 1057 RIEKENSNRRLNSELDELRERVAELERTVEDLQNQLARKDDEISQLQDQLDHETAERQKA 1116

Query: 255  FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                    +++ E  +   A++MS+    +  R+ + 
Sbjct: 1117 IKELRALTNQNQELKEDLDAEKMSRQKSDKNRRDLQE 1153


>gi|304396372|ref|ZP_07378253.1| efflux transporter, RND family, MFP subunit [Pantoea sp. aB]
 gi|304355881|gb|EFM20247.1| efflux transporter, RND family, MFP subunit [Pantoea sp. aB]
          Length = 402

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/334 (9%), Positives = 101/334 (30%), Gaps = 27/334 (8%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + +++ G ++   +V  + S   G +++     G ++  G  L   +      
Sbjct: 66  ASTADVPVWLNALGTVIPNASV-TVTSRVDGQLEQVFFTEGQKVSAGQLLAQIDPRSYQA 124

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            ++  +  +   +  +++ +  L     L  +  +  +  +S+   +  + G   +  ++
Sbjct: 125 TLNQYQGELSENQALLNSAELTLARYRKLAAQDALARQDLDSQIATVGQYRGAVAADQAQ 184

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH------------QKDL 199
           + +  +S  Y  +   ++    +         +S+    L++              Q D+
Sbjct: 185 IASAKLSIEYARITAPISGRVGLRQIDPGNMVQSASSTGLVTITQMQPAAVTFSVPQSDI 244

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDEANLEFA 256
             + ++  +       L  Q+     ++ E   +   I      +       ++    FA
Sbjct: 245 PALVSVLHQGQSLPATLFDQDNQHQLASGEVKFISNQIDTATGTVALKAVFANQDESLFA 304

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           N    +   L   +         L +         I      T+      +   +    Q
Sbjct: 305 NQFVNLRLQLRVLKGATVIPAQALQLSSDGSFVFVIN--QDHTVTRKAVTTGPTFGDDQQ 362

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            ++  V                I  +  G   T+
Sbjct: 363 AILSGVSPGDRLVTEG------IDRLTSGSKVTL 390


>gi|289665865|ref|ZP_06487446.1| membrane fusion protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 371

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 17/177 (9%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + + +  LR +   Y  A       L     D++Q +    +  ++  +        T+
Sbjct: 108 AVAQSEAQLRKLENSYRRATQLVGQQLVSA-ADVDQLKFDVENSRAQHRLASLELSYTTV 166

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +PI+G I      +  N+ Q + P+ +IV           V  +++  +K G   T+  
Sbjct: 167 QAPISGVIASRSIKT-GNFVQINTPIFRIV-DDAQLEATLNVPERELATLKSGQPVTLLA 224

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                   ++F   +++I P++            + V+      AF      L+ G 
Sbjct: 225 DALP---GQQFVGKVDRIAPVVDSGSGT------FRVV-----CAFGKGAEALQPGM 267



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 57/161 (35%), Gaps = 4/161 (2%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  +        + +  SG+     VE G ++  G  L+  +       +   +  ++
Sbjct: 59  TGTAALEPRAEAQVV-AKTSGVALSVMVEEGQKVSAGQALVRLDPDRAHLAVAQSEAQLR 117

Query: 105 NLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            L   +    +     L +  DV +  F+    +    L     + + V    IS V  S
Sbjct: 118 KLENSYRRATQLVGQQLVSAADVDQLKFDVENSRAQHRLASLELSYTTV-QAPISGVIAS 176

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +K      I      + +  + L A L+  +++L  +K+
Sbjct: 177 RSIKTGNFVQINTPIFRIVDD-AQLEATLNVPERELATLKS 216


>gi|269103839|ref|ZP_06156536.1| membrane-fusion protein [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163737|gb|EEZ42233.1| membrane-fusion protein [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 315

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 66/195 (33%), Gaps = 31/195 (15%)

Query: 226 STLELRENIHEQKNMLR---HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +L+ N+              ELY + ++    Y        E  Q ++    + +  
Sbjct: 51  EKAQLQSNVARLPAAKAKYIRYQELYKKNSISKEAY--------EDAQASYFSLKADIES 102

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQ 340
                +++TI +P +G +   ++     Y Q S     +V     + ++ +  V    I 
Sbjct: 103 QRAQLDRRTIKAPFSGQV-GLRNVFLGQYIQPST---DVVRLEDTSVMKLRFTVPQTDIS 158

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            +  G    +    Y +     F   I  I+P ++ Q   +Q Q               +
Sbjct: 159 DIHLGQNVEIFVDAYPET---PFSGKISAIEPAVNYQSGLIQVQ-----------ANIPN 204

Query: 401 NNIELRNGFPAEVLF 415
           N+ +LR+G  A    
Sbjct: 205 NDGQLRSGMFARAHI 219



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 5/132 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G I     V  I S  SGII K   ++G ++ +  PL+T +       +      +  
Sbjct: 6   AIGFIEPNQGV-TITSQVSGIIDKIDFDSGMKVKKDQPLVTLDSDVEKAQLQSNVARLPA 64

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +      +     L  K  + ++A+E  +           S  +++    I + +    
Sbjct: 65  AKAKYIRYQ----ELYKKNSISKEAYEDAQASYFSLKADIESQRAQLDRRTIKAPFSGQV 120

Query: 166 MKLTRMRSIYLN 177
                    Y+ 
Sbjct: 121 GLRNVFLGQYIQ 132


>gi|255523149|ref|ZP_05390121.1| EmrA-related transporter protein [Clostridium carboxidivorans P7]
 gi|255513264|gb|EET89532.1| EmrA-related transporter protein [Clostridium carboxidivorans P7]
          Length = 218

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 46/150 (30%), Gaps = 4/150 (2%)

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
           ++     +       E   +   + +PI GTI+              Q L  +V      
Sbjct: 69  DKEQIVGQQELAGQPESNLDTSVLRAPIKGTIIKKAVN-VGEIITAGQVLAYVV-DPDKV 126

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           YI A +   ++  +++G    +    Y   +       I +             +  + +
Sbjct: 127 YITANIEETKLTKLREGEKVDISIDKYKGKKFTGVIQSIGEASASEFSLLPTSTSANFTK 186

Query: 389 VILKITDLAFSD--NNIELRNGFPAEVLFT 416
           V+ K+      +    ++L  G  A V   
Sbjct: 187 VVQKVPVKIKLNSYGKVKLLPGINAVVKIH 216


>gi|221212235|ref|ZP_03585213.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Burkholderia multivorans CGD1]
 gi|221168320|gb|EEE00789.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Burkholderia multivorans CGD1]
          Length = 320

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 73/223 (32%), Gaps = 27/223 (12%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + +      ER+   +  + R  + + K   R         NL  +  ++E    +EQ 
Sbjct: 79  VIDRARYALAERLAEATLAQRRATLAQAK---REYARNLQLGNLVASEQVEESRTRVEQG 135

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +    D    L   +   ++ T++SP+ G  + +++     Y    + ++ +V       
Sbjct: 136 EAAVQDAQVSLDTAKLNLQRTTVVSPVDGY-LNDRAPRVGEYVPAGRAVLSVV-DRNSFR 193

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----- 384
           +       +++ +  G    +    +        +  ++ I   I  +D    +      
Sbjct: 194 VDGYFEETKLRGIHIGQPVDI----FVMGEPHSLRGHVQSIVAAIEDRDRTQGSNLLPNV 249

Query: 385 ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                     +   V + + ++    ++  +  G  A V   A
Sbjct: 250 NPAFSWVRLAQRVPVRVALDEV---PDDFRMIAGRTATVAVRA 289



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 6/118 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++    SG+I   +V +   + +G  L   +         L + ++   R  + 
Sbjct: 45  VRADVIQVAPDVSGLITSVEVADNQAVTRGQVLFVIDRARYALAERLAEATLAQRRATLA 104

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             K            L+       EQ+ +   +     + V +  +S     L ++ T
Sbjct: 105 QAKREYAR------NLQLGNLVASEQVEESRTRVEQGEAAVQDAQVSLDTAKLNLQRT 156


>gi|193078360|gb|ABO13338.2| heavy metal RND efflux membrane fusion protein CzcB family protein
           [Acinetobacter baumannii ATCC 17978]
          Length = 499

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 24/171 (14%)

Query: 252 NLEFANYLKEISRDLEQNQRTFADEM-------SKLTILEKTREQKTILSPIAGTIVYNQ 304
             EF   L+   R L Q  R     +        ++    + +   T+ +PI+G I   +
Sbjct: 173 QTEFLAVLRTGDRSLIQASRQRLQLLGIPQNVIHQVERTRRVQSNITLQAPISGFIDSLE 232

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q L  I   +   ++ A V  KQI  +K+G +    F  ++     K  
Sbjct: 233 VRN-GMALAMGQTLATIKGIN-PIWLEAAVPEKQIAGIKRGMSVEANFAAFSQ----KVT 286

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  I P +      +      +V +++ + +      +L+ G  A V  
Sbjct: 287 GKVIDILPTLDTTSRTI------KVRIELPNPS-----GQLKPGMFASVNI 326


>gi|157370105|ref|YP_001478094.1| RND family efflux transporter MFP subunit [Serratia proteamaculans
           568]
 gi|157321869|gb|ABV40966.1| efflux transporter, RND family, MFP subunit [Serratia
           proteamaculans 568]
          Length = 393

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 78/183 (42%), Gaps = 25/183 (13%)

Query: 13  HPASLKRMTLLSIIGIIGLITWSILLP--------------IEISVSSSGEILNEDNVVE 58
            P  L  + + +++ II L+ +S+  P              IE +V ++G++   + V  
Sbjct: 4   TPRRLAFILIGALLVIIALVVFSLQSPPQAASVTAPVRLGDIENAVLATGKLDAIERV-N 62

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +  SG +K  +V+ G ++ +G P+   +D+   + +   + ++   +  +  +++ L 
Sbjct: 63  VGAQVSGQVKSLKVKLGDKVTKGQPIADIDDLPQRNDLRNAEAALNVAKADLQAKQALLK 122

Query: 119 FLNNKYDVLEK----------AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
              +++   ++           FE+ E  L     +  +  +++    I    + + +  
Sbjct: 123 QAESRFKRQKRMLSDEAGSREDFETAEATLAATRAELIALNARIVQAQIEVDKKKVDLSY 182

Query: 169 TRM 171
           TR+
Sbjct: 183 TRI 185



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 67/230 (29%), Gaps = 28/230 (12%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQN 269
            +NDL   E  +  +  +L+      K             + E       +     L   
Sbjct: 96  QRNDLRNAEAALNVAKADLQAKQALLKQAESRFKRQKRMLSDEAGSREDFETAEATLAAT 155

Query: 270 QRTFADEMSKLTILE-------KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           +       +++   +              IL+P+ G ++             +Q    IV
Sbjct: 156 RAELIALNARIVQAQIEVDKKKVDLSYTRILAPMDGIVIAV-ITQQGQTVNANQSAPTIV 214

Query: 323 PHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             +   +  I+A+++   I  V +G  A        D R       +E     + + D+ 
Sbjct: 215 KLAQLDVMTIKAQISEADITRVSQGQKAYFTIFSEPDKRYDATLRTVELAPESVMKDDSV 274

Query: 381 LQTQE-----------YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +             YY  +L + +    DN + +     A+V      
Sbjct: 275 SGSSSSSGSGSSNASVYYNALLDVPNP---DNRLRIA--MTAQVSLLLGE 319


>gi|77463353|ref|YP_352857.1| cation efflux transporter [Rhodobacter sphaeroides 2.4.1]
 gi|77387771|gb|ABA78956.1| Cation/multidrug efflux pump, Membrane fusion protein (MFP) family
           [Rhodobacter sphaeroides 2.4.1]
          Length = 386

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 83/244 (34%), Gaps = 27/244 (11%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE + S   A L+S +  +   +    +   ++   ++ ER V + T +LR+     +  
Sbjct: 94  LELQKSQFTASLASARATIAQAE---AQVLEAKASADEAER-VNRRTAQLRQQGAASQAA 149

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                     AN           + LE  +   A   ++L  +E    + ++++P+AG I
Sbjct: 150 ADTAQAASVSANARVMV----ARQTLEAARAQVALAEAQLANIELQLNRTSVVAPVAGEI 205

Query: 301 VYNQSFSSSNYAQQ-SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           V  ++      A    +P+  ++       + A V  + +  ++ G    +R        
Sbjct: 206 VS-RTAKVGAIASAQGEPMFTLL-RDGQLELFADVAEQDLLRLRPGQKVLIR----TLGT 259

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +  +  +  ++P I                + I  +        +R+G  AE       
Sbjct: 260 AEPLEGTVRLVEPTIDTATRLG------RARIAIGQME------AVRSGMFAEAEILVSE 307

Query: 420 TTLA 423
               
Sbjct: 308 RDAL 311



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 74/250 (29%), Gaps = 7/250 (2%)

Query: 44  VSSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V +SG I   + V  ++       I+  + + G  + +G  L                 S
Sbjct: 46  VIASGLIGAVELVQ-VQPLIEGQPIETLEADVGDTVAEGQVLARLSVSTLELQKSQFTAS 104

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           + + R  I   ++ +       D  E+    R  QL        +         +S+  R
Sbjct: 105 LASARATIAQAEAQVLEAKASADEAERVNR-RTAQLRQQGAASQAAADTAQAASVSANAR 163

Query: 163 SLKMKLT---RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            +  + T       + L    L N    L            ++    +  A++       
Sbjct: 164 VMVARQTLEAARAQVALAEAQLANIELQLNRTSVVAPVAGEIVSRTAKVGAIASAQGEPM 223

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
             ++    LEL  ++ EQ  +     +      L  A  L E +  L +     A  + +
Sbjct: 224 FTLLRDGQLELFADVAEQDLLRLRPGQKVLIRTLGTAEPL-EGTVRLVEPTIDTATRLGR 282

Query: 280 LTILEKTREQ 289
             I     E 
Sbjct: 283 ARIAIGQMEA 292


>gi|59801782|ref|YP_208494.1| putative ABC transporter, periplasmic protein [Neisseria
           gonorrhoeae FA 1090]
 gi|59718677|gb|AAW90082.1| putative ABC transporter, periplasmic protein [Neisseria
           gonorrhoeae FA 1090]
          Length = 392

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ID++
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTIDME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 83/257 (32%), Gaps = 26/257 (10%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               +++ +Y+       K  L+  + S+ Q +   M+        S+ +  Q + +  +
Sbjct: 64  QASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTIDMEK-------SKLETYQAKLVSAQ 116

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             L   E  ++++  L   +    E      + L     ++ + +         +   E 
Sbjct: 117 IALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELKALIRQSKISINTAES 176

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVK 343
                 I + + GT+V             +Q    IV  +   +   + ++    I  VK
Sbjct: 177 DLGYTRITATMDGTVVAIPV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGDITKVK 235

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVILKITD 395
            G    + F   ++      KA ++ +DP ++           +      YY     +  
Sbjct: 236 AGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYARSFVP- 291

Query: 396 LAFSDNNIELRNGFPAE 412
               + + +L  G   +
Sbjct: 292 ----NPDGKLATGMTTQ 304


>gi|86132019|ref|ZP_01050615.1| efflux transporter, RND family, MFP subunit [Dokdonia donghaensis
           MED134]
 gi|85817353|gb|EAQ38533.1| efflux transporter, RND family, MFP subunit [Dokdonia donghaensis
           MED134]
          Length = 388

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 21/165 (12%)

Query: 21  TLLSIIGIIGLITWSILLP-----------------IEISVSSSGEILNEDNVVEIKSPF 63
           TL+ I     +  W I                    I     ++G I+ ++ V  IK   
Sbjct: 9   TLVLIAVFFSIGIWYIYTKDKQDPVVYTTEQATNRTIVKKTVATGSIVPKEEV-LIKPNI 67

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGIIK+  VE G  I  G  +   + +     +   K +I   R  ++T + AL    + 
Sbjct: 68  SGIIKEVYVEAGDNIKAGDLIAQIDVVPNVSSLTNAKNNIAGARTTVETARLALANQKSI 127

Query: 124 YDVLEKAFESREEQLLDF---LGKYHSTCSKVFNYGISSVYRSLK 165
           YD  +  F+       DF      Y++   ++    ++    S  
Sbjct: 128 YDRQKALFDKGVISANDFDNIRNTYNAAEQRLKQEQVNLRSASQN 172



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 76/257 (29%), Gaps = 45/257 (17%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           ++ + +   N           R  L++ +      K LF+K  +S ND +        + 
Sbjct: 97  VSSLTNAKNNIAGARTTVETARLALANQKSIYDRQKALFDKGVISANDFDNIRNTYNAAE 156

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             L++     ++  ++ + +         N                              
Sbjct: 157 QRLKQEQVNLRSASQNYDIIKTGTTSGLGNAAT--------------------------- 189

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQ-----SQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
               I S I G I+     + +   +         +  +    +      KV   ++  +
Sbjct: 190 --TQIRSTITGMILDVPVKAGNQVIEANNFNDGTTVATLA-DVEKMIFEGKVDESEVGKI 246

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K+     +       I  K F A ++ I P    ++  +Q    +E+      LA  D++
Sbjct: 247 KEDLPLEITVGA---IENKVFDATLDYIAPKGVAENGAIQ----FEIK---GTLAKKDDD 296

Query: 403 IELRNGFPAEVLFTAKN 419
             +R G  A      + 
Sbjct: 297 TFIRAGLSANASIILEK 313


>gi|328474677|gb|EGF45482.1| putative secretion protein [Vibrio parahaemolyticus 10329]
          Length = 354

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 66/210 (31%), Gaps = 21/210 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +   +     SL+    +  ++Y  R       +  +A   +  ++ T +  L ++  
Sbjct: 78  RKYKIALEQAELSLQSAYEKEATLYSQREAALANIARAQATFDNAHREYTRLLTLSKQKV 137

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +SQ+ L+        S   L+      K +   + +   ++                   
Sbjct: 138 ISQSTLDNAFAQNQVSRAALKAERQNLKVIEAQLGDQKGQSTAVRI-------------- 183

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  + +   +       +L+P  G +   Q       A  + PLM  VP     ++
Sbjct: 184 -----AKNGIEKAQLDLANTAVLAPSDGVVTNLQL-EVGTMANTNMPLMTFVPTGS-LWV 236

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            A    K + +V K Y A V F        
Sbjct: 237 AADFREKSVANVDKTYHALVTFDANPGSVY 266



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M  + K  H   ++ + +L I+  + +I      P+       G ++      ++    S
Sbjct: 1   MTADQKFKHW--MRTLIVLFIVLFLYIIIADRHAPLTTEGRVQGYVV------QVAPEVS 52

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    +EN   + +G  L T +D +    ++  ++S+++      T  S  +      
Sbjct: 53  GKVTDVLIENNQSVQKGDVLFTIDDRKYKIALEQAELSLQSAYEKEATLYSQREAALANI 112

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +  F++   +    L    S    +    + + +   ++    +++   N   +E +
Sbjct: 113 ARAQATFDNAHREYTRLLT--LSKQKVISQSTLDNAFAQNQVSRAALKAERQNLKVIEAQ 170

Query: 185 SSLLRALLSSHQKDLTMMKN 204
               +   ++ +     ++ 
Sbjct: 171 LGDQKGQSTAVRIAKNGIEK 190


>gi|299530429|ref|ZP_07043850.1| macrolide-specific efflux protein macA [Comamonas testosteroni S44]
 gi|298721569|gb|EFI62505.1| macrolide-specific efflux protein macA [Comamonas testosteroni S44]
          Length = 393

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 54/137 (39%), Gaps = 6/137 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V++ G +     V ++ +  SG I +  V  G+++ +G  L+  +       +D  
Sbjct: 44  VESTVTAIGTLQPRTYV-DVGAQVSGQITRLLVSPGARVEKGALLVEIDPSVQRATVDAG 102

Query: 100 KVSIKNLRCHIDTEKSALDFL-----NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           + S+ +LR  I  +++ L          +    E+A    + Q+ +      +       
Sbjct: 103 RASLASLRAQIAEQQAQLKLAGQQLKRQQQLAAEEATRQEDVQIAEAQVAGAAARIDHLK 162

Query: 155 YGISSVYRSLKMKLTRM 171
             +     SLK    R+
Sbjct: 163 AQMQQTQASLKADEARL 179


>gi|295084455|emb|CBK65978.1| RND family efflux transporter, MFP subunit [Bacteroides
           xylanisolvens XB1A]
          Length = 406

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 69/212 (32%), Gaps = 11/212 (5%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDL 266
             +++ D    +  +            E +   ++        E +L      ++   + 
Sbjct: 86  QLIAEMDRITLQSELASQQATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ + ++    + L   E+     TI SPI G ++  +   +            L  I  
Sbjct: 146 QKAKSSYDSSKASLAKAERNLSYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 + A V    I  V +G  A+     Y +     F+ ++ +I   +    +   T
Sbjct: 205 DLTQMQVVADVDEADIGGVVEGQRASFTVDAYPND---VFEGVVTQIR--LGDASSTSNT 259

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                V+     ++  + +++L+    A V  
Sbjct: 260 SSTTTVVTYEVVISAPNPDLKLKPRLTANVTI 291



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 53/135 (39%), Gaps = 4/135 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII K  V+  S + +G  +   + I     +  +
Sbjct: 45  ISNSVTATGTIEPVTEV-EVGTQVSGIIDKIHVDYNSVVTKGQLIAEMDRITLQSELASQ 103

Query: 100 KVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + +    +   + +K   +    L+ K  + +  FE            Y S+ + +    
Sbjct: 104 QATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNYQKAKSSYDSSKASLAKAE 163

Query: 157 ISSVYRSLKMKLTRM 171
            +  Y ++   +  +
Sbjct: 164 RNLSYATITSPIDGV 178


>gi|294667183|ref|ZP_06732406.1| membrane fusion protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292603082|gb|EFF46510.1| membrane fusion protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 414

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 66/192 (34%), Gaps = 26/192 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSI-------------LLPI---------EISV 44
              +   P  ++R   +    I+ ++  +                P+            +
Sbjct: 14  DRQRPATPPPVRRTGWILAAVIVVIVLAAAAWWFTRRPMVKVQTAPVVAISAGSSSASVL 73

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            +SG +     +  + +  +G +++  +E G  + QG  + T + ++      L    + 
Sbjct: 74  DASGYV-VARRMATVSAQVTGKVREVMIEEGMCVQQGQVMATLDPLDADAQRSLSASQLS 132

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESR---EEQLLDFLGKYHSTCSKVFNYGISSVY 161
             R  +D  ++ L   N     L+    ++     Q    + +  +  +++ N   +   
Sbjct: 133 AARSQVDNMQAQLAVANADATRLQSLVGAQLVSRSQYDQAIAQRDALRAQLQNAQRNVQV 192

Query: 162 RSLKMKLTRMRS 173
            S ++ +  +RS
Sbjct: 193 ASDQLAIAGIRS 204



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 58/217 (26%), Gaps = 26/217 (11%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--EFANYLKEISR 264
            + ++S + L+     V     +L     +   +   +       +   +       +  
Sbjct: 122 AQRSLSASQLSAARSQVDNMQAQLAVANADATRLQSLVGAQLVSRSQYDQAIAQRDALRA 181

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP------- 317
            L+  QR       +L I     +   + +P AG +V  ++                   
Sbjct: 182 QLQNAQRNVQVASDQLAIAGIRSDFNVVRAPFAG-VVTAKAAQPGEIVSPLSAGGGFTRT 240

Query: 318 -LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +  IV   +   I  +V    I  V+           Y + +       +  I P   +
Sbjct: 241 GIGTIV-DMESLEIEVEVGESYIGRVQPKMPVEAVLNAYPEWK---IPGEVIAIIPTADR 296

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                       V +++   A    +  +       V
Sbjct: 297 GKAT--------VKVRV---ALKVKDPRIVPEMGVRV 322


>gi|241664114|ref|YP_002982474.1| RND family efflux transporter MFP subunit [Ralstonia pickettii 12D]
 gi|240866141|gb|ACS63802.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii
           12D]
          Length = 384

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 73/243 (30%), Gaps = 27/243 (11%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL--ELRENIHEQKNMLR 242
              +R   +     +   K LF+   +   DL Q E  +  +    +L  +   +   L 
Sbjct: 81  QGKIRNTYAKVGDTVAKGKPLFD---IESPDLVQAESTLISTAGTRKLTTDALARARQLY 137

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFA------DEMSKLTILEKTREQKTILSPI 296
            I  L  +   +  +  +      +  +   A       +M ++    KT    T++SPI
Sbjct: 138 EIQGLAQKDLDQAISDQQAAEAAYKAAREALAVFGKTPAQMDQIVQTRKTDSLLTVVSPI 197

Query: 297 AGTIVYNQSFSSSNYAQQS-QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           +G +   +S       Q         V      +++A V    +  +  G    +    +
Sbjct: 198 SGQVTA-RSAQPGLLLQPGNGTAPFTVADVSTMWMQAFVPEADVPLLHVGQPVKIHVMAF 256

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                  F   I  +   +    + +       V  +I D        ELR G       
Sbjct: 257 PGR---VFNGKITTVGASVDANTHRI------LVRSEIDDP-----KHELRPGMFTSFDI 302

Query: 416 TAK 418
           T  
Sbjct: 303 TTG 305


>gi|221120547|ref|XP_002165606.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 7746

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 57/213 (26%), Gaps = 3/213 (1%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L   + E   +    + + K      + EK  +     +   +      +     +   K
Sbjct: 5043 LRLAEEEAKKVRIAAEKAEKLRLAEEEAEKVRIAAEEAENLRIATEEAEKLRIAAEEAEK 5102

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                  +     I++              + L   + E               +    K 
Sbjct: 5103 LRLAEEEAEKVRIAAEEAEKLRIAAEAEKLRLAEEEAEKVRIAEEEADKVRIAEEEAEKL 5162

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENI---HEQKNMLRHINELYDEANLEFANYLKE 261
               +    +  + ++E    +   E  E +    E + M     E       E       
Sbjct: 5163 RLAEEEAEKVRIAEEEAEKVRIAAEEAEKLHISEETEKMSSAAEEAEKSHIAEKEAEKLR 5222

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            I+ +  +     A+E  KL + E+  E+  I +
Sbjct: 5223 IATEEAEKLCIAAEEAEKLRLAEEEAEKVHIAA 5255



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 80/231 (34%), Gaps = 9/231 (3%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            E   ++           +   +   ++    +  +  I  E++    ++ + + +  A E
Sbjct: 5147 EEADKVRIAEEEAEKLRLAEEEAEKVRIAEEEAEKVRIAAEEAEKLHISEETEKMSSAAE 5206

Query: 133  SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              E+  +    K                  + + +  R+      ++ +  + +    + 
Sbjct: 5207 EAEKSHIA--EKEAEKLRIATEEAEKLCIAAEEAEKLRLAEEEAEKVHIAAEEAEKLRIA 5264

Query: 193  SSHQKDLTMMKNLFEKNAVS-----QNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +   + L + K   EK  ++     +  L ++E    +   E  E +      +  ++  
Sbjct: 5265 AEEAEKLRLAKKEAEKVRIAEEEAEKLRLTEEEAEKVRIAAEEAEKLRIAAEEVEKVHIA 5324

Query: 248  YDEAN-LEFANYLKEISRDLEQNQR-TFADEMSKLTILEKTREQKTILSPI 296
             +EA  L  A   +++    E+ ++   A+E  K+ I E+  E   I + +
Sbjct: 5325 EEEAEKLRLAEEAEKLRIAAEEAEKLRLAEEAEKVCIAEEETENLRIATEV 5375



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 69/212 (32%), Gaps = 5/212 (2%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L   + E   +    + + K      + EK  L     K   +      +     +   K
Sbjct: 5013 LRLAEEEAEKVRIAAEEAEKLRIAEEEAEKLRLAEEEAKKVRIAAEKAEKLRLAEEEAEK 5072

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                  +  N  I++     K+++    +  L   + E +   + A  +   +     + 
Sbjct: 5073 VRIAAEEAENLRIATEEAE-KLRIAAEEAEKLRLAEEEAEKVRIAAEEAEKLRIAAEAEK 5131

Query: 205  L-FEKNAVSQNDLNQQERIVYKSTLELRE--NIHEQKNMLRHINELYDEANLEFANYLKE 261
            L   +    +  + ++E    +   E  E   + E++     I E   E     A   ++
Sbjct: 5132 LRLAEEEAEKVRIAEEEADKVRIAEEEAEKLRLAEEEAEKVRIAEEEAEKVRIAAEEAEK 5191

Query: 262  IS-RDLEQNQRTFADEMSKLTILEKTREQKTI 292
            +   +  +   + A+E  K  I EK  E+  I
Sbjct: 5192 LHISEETEKMSSAAEEAEKSHIAEKEAEKLRI 5223



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/208 (12%), Positives = 61/208 (29%), Gaps = 6/208 (2%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L   + E   +    + + K      + EK  +     +   +      +     +   K
Sbjct: 4953 LRLAEEEAKKVRIAAEEAEKLRLAEEEAEKVRIAAEEAENLCIATEEAEKLRIAAEEAEK 5012

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                  +     I++          R+      +L L  + +    + +   + L + + 
Sbjct: 5013 LRLAEEEAEKVRIAAEEAEKL----RIAEEEAEKLRLAEEEAKKVRIAAEKAEKLRLAEE 5068

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
              EK  ++  +       +     E      E+   LR   E  ++  +      K    
Sbjct: 5069 EAEKVRIAAEEAENLR--IATEEAEKLRIAAEEAEKLRLAEEEAEKVRIAAEEAEKLRIA 5126

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTI 292
               +  R   +E  K+ I E+  ++  I
Sbjct: 5127 AEAEKLRLAEEEAEKVRIAEEEADKVRI 5154



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 71/208 (34%), Gaps = 6/208 (2%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L   + E   +   ++ + K      + EK  L       +  EK   + EE     +  
Sbjct: 5132 LRLAEEEAEKVRIAEEEADKVRIAEEEAEKLRLAE-----EEAEKVRIAEEEAEKVRIAA 5186

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              +    +          + + + + +      +L +  + +    + +   + L + + 
Sbjct: 5187 EEAEKLHISEETEKMSSAAEEAEKSHIAEKEAEKLRIATEEAEKLCIAAEEAEKLRLAEE 5246

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
              EK  ++  +  +  RI  +   +LR    E + +     E       E       I+ 
Sbjct: 5247 EAEKVHIAAEEAEKL-RIAAEEAEKLRLAKKEAEKVRIAEEEAEKLRLTEEEAEKVRIAA 5305

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTI 292
            +  +  R  A+E+ K+ I E+  E+  +
Sbjct: 5306 EEAEKLRIAAEEVEKVHIAEEEAEKLRL 5333



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 80/233 (34%), Gaps = 9/233 (3%)

Query: 69   KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
            +  ++      Q   L   ++       +L  + ++               +  K D+  
Sbjct: 4737 ELHIKQSELRTQEDKLHKKQEELYKSESELF-IRLQEAELQRTALAEEEKRIKEKEDLKL 4795

Query: 129  KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            K  + +E ++ D   +      ++       +   L+ +  ++++        +     L
Sbjct: 4796 KILQLKEMEI-DLNTREKKLEERIKAEEKQIILDRLRFEEQKLKNEAEQLEKFKEAEMTL 4854

Query: 189  RALLSSHQ----KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNML 241
            +  L   Q    K   M + L++K    + +L +   ++ + TL   +  E     +  +
Sbjct: 4855 KRTLFEEQFKREKQNQMERELWKKGLEEEIELERLALMLTQQTLFQVKSEEIEKAMEKKI 4914

Query: 242  RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              + E+   A  +       I+ +  +  R   +E  KL + E+  ++  I +
Sbjct: 4915 FELTEVSRIAVEKVEAEKVRIAAEEAEKLRIAEEEAEKLRLAEEEAKKVRIAA 4967


>gi|194434305|ref|ZP_03066570.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Shigella dysenteriae 1012]
 gi|194417453|gb|EDX33557.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Shigella dysenteriae 1012]
          Length = 299

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 70/220 (31%), Gaps = 27/220 (12%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S +     +  +   +   +S    +L +     +   V+  DL            EL
Sbjct: 44  MQSPWTRDGKIRAEQVSITPQVSGRIVELNIK----DNQLVNAGDLLLTIDKTPFQIAEL 99

Query: 231 RENIHEQKNMLRHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTI 282
                +       + +  +EAN           A  L   + +++  Q +     + L  
Sbjct: 100 NAQ-AQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQ 158

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQ 338
            +    Q  I +P++G +    +    +YA   +PL  +V       I      K+    
Sbjct: 159 TQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR--- 214

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             H+++G  A +          K  +  +  I   I  Q 
Sbjct: 215 --HIREGAPAQITL----YSDNKTLQGHVSSIGRAIYDQS 248



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 15  MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 70

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 71  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 130

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 131 SAEELDTANLNVKAMQASVDAAQATLKQTQWQLAQTEIRA 170


>gi|167623184|ref|YP_001673478.1| secretion protein HlyD family protein [Shewanella halifaxensis
           HAW-EB4]
 gi|167353206|gb|ABZ75819.1| secretion protein HlyD family protein [Shewanella halifaxensis
           HAW-EB4]
          Length = 380

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 89/290 (30%), Gaps = 43/290 (14%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + +   +    +SLK     + +   N    + K +   A L + Q     +  + +K 
Sbjct: 102 PQDYEIALHQAEQSLKKAGQNVGAQTANVTAAQAKVTNAVANLKNVQVQSKRIFAMVDKA 161

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +SQ D +     + K+   +     +       +                       +N
Sbjct: 162 VMSQADGDNARAELTKAEAGVASAKADLAKAQERLGAE-------------------GEN 202

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                  +  L   +    + +I +P  G +  N       YA   QP+M  +  S+  +
Sbjct: 203 NTNVKSALLSLETAQINLARTSITAPTDG-VASNFRLKEGIYASAGQPVMTFI-SSEDVW 260

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS----QQDNN----- 380
           I A      + ++K G               + FKA +  ID  I     +Q        
Sbjct: 261 IEAYFRENSLGNMKAGDKVEF---ALDYAPGEVFKAKVGSIDYGIDWGQSEQTGKLAQVS 317

Query: 381 ------LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
                  Q+Q +   I+   D A     +    G  A+V+    + ++  
Sbjct: 318 GQTGWLRQSQRFPVTIVLPADEAVGLRRV----GGQADVIVYTSDNSIIN 363


>gi|161523387|ref|YP_001578399.1| RND family efflux transporter MFP subunit [Burkholderia multivorans
           ATCC 17616]
 gi|189351840|ref|YP_001947468.1| HlyD family secretion protein [Burkholderia multivorans ATCC 17616]
 gi|160340816|gb|ABX13902.1| efflux transporter, RND family, MFP subunit [Burkholderia
           multivorans ATCC 17616]
 gi|189335862|dbj|BAG44932.1| HlyD family secretion protein [Burkholderia multivorans ATCC 17616]
          Length = 400

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/280 (11%), Positives = 80/280 (28%), Gaps = 41/280 (14%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            + T      Y +     ++  K                K   + A L S   + ++ + 
Sbjct: 62  QNDTQLNATGYVVPQRKAAVASKGQGRVEWLGVLEGTRVKKDEIIARLESRDVEASLAQA 121

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L +   V++ +L  Q+  +  + + LR              +L  +        + +   
Sbjct: 122 LAQVK-VARANLGVQQAELKDAEIALRRTAALAPRGAVPAAQLDTDTA-----RVNKARA 175

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-------------SSSNY 311
            +   +   A   +     +   +Q  I +P  G ++   +              S    
Sbjct: 176 SVNSGEAAVASAEANARAAQVAVDQTVIRAPFDGIVLAKHANVGDNITPFSSASDSKGAV 235

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 +  +        + A V    I  ++ G    ++     D+R   F   + +I 
Sbjct: 236 V----TIADM----DTLEVEADVAESNIAKIRAGQPCEIQLDALPDMR---FAGRVSRIV 284

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           P + +    +       V ++     F D +  +     A
Sbjct: 285 PTVDRSKATV------LVKVR-----FVDRDDRVLPDMSA 313



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 39/115 (33%), Gaps = 4/115 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  ++++G ++ +     + S   G ++   V  G+++ +   +   E  +    +    
Sbjct: 64  DTQLNATGYVVPQRKA-AVASKGQGRVEWLGVLEGTRVKKDEIIARLESRDVEASLAQAL 122

Query: 101 VSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +K  R ++     E    +    +   L         QL     + +   + V
Sbjct: 123 AQVKVARANLGVQQAELKDAEIALRRTAALAPRGAVPAAQLDTDTARVNKARASV 177


>gi|221065515|ref|ZP_03541620.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
 gi|220710538|gb|EED65906.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
          Length = 393

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 55/137 (40%), Gaps = 6/137 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V++ G +     V ++ +  SG I +  V  G+Q+ +G  L+  +       +D  
Sbjct: 44  VESTVTAIGTLQPRTYV-DVGAQVSGQITRLLVSPGAQVEKGALLVEIDPSVQRATVDAG 102

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYD-----VLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           + S+ +LR  I  +++ L   + +         E+A    + Q+ +      +       
Sbjct: 103 RASLASLRAQIAEQQAQLKLASQQLKRQQQLASEEATRQEDVQIAEAQVAGAAARIDHLK 162

Query: 155 YGISSVYRSLKMKLTRM 171
             +     SLK    R+
Sbjct: 163 AQMQQTQASLKADEARL 179


>gi|333030839|ref|ZP_08458900.1| efflux transporter, RND family, MFP subunit [Bacteroides coprosuis
           DSM 18011]
 gi|332741436|gb|EGJ71918.1| efflux transporter, RND family, MFP subunit [Bacteroides coprosuis
           DSM 18011]
          Length = 415

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/351 (12%), Positives = 101/351 (28%), Gaps = 85/351 (24%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +  SG++   + +  + +   GI+++  VE GS +  G  ++   +              
Sbjct: 61  IRISGQVQPINTIQ-LSAIEGGIVEEKLVEEGSMVKSGDIIVRLSN-------------- 105

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                       +L  L+++  + EK    R  Q+                         
Sbjct: 106 ---------PNLSLSILDSEAQLAEKQNFLRNTQVT------------------------ 132

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                     +   RL L  +   L   +   ++       L+ +  VS+ +  Q +   
Sbjct: 133 ----------MEQERLRLRQEKLQLDLDVDRKRRRYEQYNRLYSERLVSKEEYIQAKEDY 182

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +                   EL  +  ++ + Y       +E  + +  +    + ++
Sbjct: 183 DFAV---------------RGRELVMDRQMQDSIYR---GIQVENMEESLHNMRRNMHLV 224

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            +  +   I +P+ G  +                + +I   S    + A +    I  VK
Sbjct: 225 RQRSDNLNIKAPVDGQ-LGLLDIEVGQNVVSGSKIGQISVLSD-FKVEALIDEHYIDRVK 282

Query: 344 KGYTA--TVRFPHYADI---REKKFKAIIEKIDPIISQQ--DNNLQTQEYY 387
            G  A    +   Y         + +    K D +   +   N    Q YY
Sbjct: 283 SGLDASFERQETAYELRVRKVYPEVREKQFKTDFVFVGERPSNIRTGQTYY 333


>gi|325526803|gb|EGD04303.1| efflux system transport protein [Burkholderia sp. TJI49]
          Length = 317

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 60/175 (34%), Gaps = 9/175 (5%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q      ER+   +  + R  + + K   R         NL  +  ++E    +EQ 
Sbjct: 77  VIDQARYTLAERLAEATLAQRRATLAQAK---REYARNLQLGNLVASEQVEESRTRVEQG 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   AD    L   +   ++ TI+SP+ G  + +++     Y    + ++ +V       
Sbjct: 134 EAAVADAQVSLDTAKLNLQRTTIVSPVDGY-LNDRAPRVGEYVPAGRAVLSVV-DRNSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +       +++ +  G    +             +  ++ I   I  +D    + 
Sbjct: 192 VDGYFEETKLRGIHIGQPVDIIVMGEPH----ALRGHVQSIVAAIEDRDRTQGSN 242



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 41/118 (34%), Gaps = 6/118 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++    SG+I   +V +   + +G  L   +    T    L + ++   R  + 
Sbjct: 43  VRADVIQVAPDVSGLITSVEVADNQAVKRGQVLFVIDQARYTLAERLAEATLAQRRATLA 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             K            L+       EQ+ +   +     + V +  +S     L ++ T
Sbjct: 103 QAKREYAR------NLQLGNLVASEQVEESRTRVEQGEAAVADAQVSLDTAKLNLQRT 154


>gi|322491824|emb|CBZ27097.1| hypothetical protein, unknown function [Leishmania mexicana
            MHOM/GT/2001/U1103]
          Length = 3925

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/205 (11%), Positives = 61/205 (29%), Gaps = 4/205 (1%)

Query: 87   FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
             ED   +      +++    +     E++            E A    + +  +   +  
Sbjct: 1402 LEDRGISHSAKDAEMADLREQLREAEERARDVEAQQSDRDAEMADLREQLREGEERARDV 1461

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                   +  ++ +   L+    R R +   + D + + + LR  L   ++    ++   
Sbjct: 1462 EAQQSDRDAEMADLREQLREAEERARDVEAQQSDRDAEMADLREQLREAEERARDVEAQQ 1521

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
                    DL +Q R   +   ++     ++   +  + E   EA        +++    
Sbjct: 1522 SDRDAEVADLREQLREAEERARDVEAQQSDRDAEVADLREQLREAE----ERARDVEAQQ 1577

Query: 267  EQNQRTFADEMSKLTILEKTREQKT 291
                   AD   +L   E+      
Sbjct: 1578 SDRDAEVADLREQLREAEERARDVE 1602



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/205 (11%), Positives = 61/205 (29%), Gaps = 4/205 (1%)

Query: 87   FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
             ED   +      +++    +     E++            E A    + +  +   +  
Sbjct: 2347 LEDRGISHSAKDAEMADLREQLREAEERARDVEAQQSDRDAEMADLREQLREAEERARDV 2406

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                   +  ++ +   L+    R R +   + D + + + LR  L   ++    ++   
Sbjct: 2407 EAQQSDRDAEVADLREQLREAEERARDVEAQQSDRDAEMADLREQLREAEERARDVEAQQ 2466

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
                    DL +Q R   +   ++     ++   +  + E   EA        +++    
Sbjct: 2467 SDRDAEVADLREQLREAEERARDVEAQQSDRDAEVADLREQLREAE----ERARDVEAQQ 2522

Query: 267  EQNQRTFADEMSKLTILEKTREQKT 291
                   AD   +L   E+      
Sbjct: 2523 SDRDAEMADLREQLREGEERARDVE 2547



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 74/217 (34%), Gaps = 18/217 (8%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH--S 147
                  ++   + I+ LR  +   +   + L+ +   LE+     +  +L+        S
Sbjct: 2887 TALEKQVEEAALEIRELREQLAVTQVRREALDAECGELEQQLRDVQSSVLERREAVEDLS 2946

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK---------- 197
                  +  ++ +   L+    R R +   + D + + + LR  L   ++          
Sbjct: 2947 ISHSAKDAEVADLREQLREAEERARDVEAQQSDRDAEMADLREQLREAEERARDVEAQQS 3006

Query: 198  ----DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE-QKNMLRHINELYDEAN 252
                ++  ++    +      D+  Q+        +LRE + E  +  LR   E   +  
Sbjct: 3007 DRDAEMADLREQLREAEERARDVEAQQSDRDAEMADLREQLREAAEGQLREAEERARDVE 3066

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             + ++   E+  DL +  R   +    +   +  R+ 
Sbjct: 3067 AQQSDRDAEM-ADLREQLREGEERARDVEAQQSDRDA 3102


>gi|225075392|ref|ZP_03718591.1| hypothetical protein NEIFLAOT_00397 [Neisseria flavescens
           NRL30031/H210]
 gi|224953210|gb|EEG34419.1| hypothetical protein NEIFLAOT_00397 [Neisseria flavescens
           NRL30031/H210]
          Length = 393

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 84/226 (37%), Gaps = 29/226 (12%)

Query: 24  SIIGIIGLITWSILLP---------------IEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           ++I       WS++ P               I  +VS++GEI    N+V + +  SG IK
Sbjct: 12  AVIVAAAFGGWSLMKPEPQSSFITEVVKRGDIRQTVSATGEISPS-NLVSVGAEASGQIK 70

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           K  V+ G Q+ +G  +         + ++ +K  ++  +  + + + AL     KY    
Sbjct: 71  KLYVKLGQQVKKGDLIAEINSTNQINTLNTEKSKLETYQAKLVSAEIALSSAEKKYKREL 130

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFN-YGISSVYRSLKMKLTRMRSIYLNR--------- 178
             ++ +     D      S  +   N   + +  +  K+ +    S   +          
Sbjct: 131 ALWKEQATSKEDLESAQDSLAAAKANVAELKAAIKQSKISINTAESELGHTRITATMDGT 190

Query: 179 ---LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
              + +E   S+  A  +     L  ++ +  K  +++ D+ + + 
Sbjct: 191 VVAIPVEEGQSVNAAQSTPTIIQLANLETMLNKMQIAEGDITKVKA 236



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 82/263 (31%), Gaps = 31/263 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAEASGQIKKLYVKLGQQVKKGDLIAEINSTNQINTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K  L          E      + L     ++ + +         +
Sbjct: 112 LVSAEIALSSAEKKYKRELALWKEQATSKEDLESAQDSLAAAKANVAELKAAIKQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPK 337
              E       I + + GT+V             +Q    ++++  + +    + ++   
Sbjct: 172 NTAESELGHTRITATMDGTVVAIPV-EEGQSVNAAQSTPTIIQLA-NLETMLNKMQIAEG 229

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--------YYEV 389
            I  VK G    + F   ++      KA ++ +DP ++       T          YY  
Sbjct: 230 DITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSLGSYTSSTDTTSNAIYYYA 286

Query: 390 ILKITDLAFSDNNIELRNGFPAE 412
              +      +N+ +L  G   +
Sbjct: 287 RALVP-----NNDGKLSIGMTTQ 304


>gi|222110506|ref|YP_002552770.1| hypothetical protein Dtpsy_1305 [Acidovorax ebreus TPSY]
 gi|319763529|ref|YP_004127466.1| secretion protein hlyd family protein [Alicycliphilus denitrificans
           BC]
 gi|221729950|gb|ACM32770.1| secretion protein HlyD family protein [Acidovorax ebreus TPSY]
 gi|317118090|gb|ADV00579.1| secretion protein HlyD family protein [Alicycliphilus denitrificans
           BC]
          Length = 346

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 85/258 (32%), Gaps = 18/258 (6%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                     + + + +L      LR    +  ++        +  A+      Q++  +
Sbjct: 88  QDALAAAQAQVQVAQAELAKLRRGLRPQEITQAREALRQ---AQAQALDAERNFQRQSSL 144

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTI 282
             S    +  +   +          + A    +   +   ++ +E  Q   A   +    
Sbjct: 145 LASGASSQRTVDAARTARDQAAAGVESAKAALSQASEGFRKEDIEAAQARLAAAQAAAAQ 204

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
              +     + +P  GTI+  +     +       +  +    K  Y+RA V  + +  +
Sbjct: 205 ATTSLADTELTAPSNGTIIA-RVREPGSMVASQSTVYSLS-LDKPVYVRAYVGERDLGRI 262

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLA 397
             G    VR    +D  EK ++  +  I P       + +  +L+T   Y + + I +  
Sbjct: 263 APGTVVHVR----SDSGEKVYRGQVGFISPRAEFTPKTVETTDLRTDLVYRLRIVIDE-- 316

Query: 398 FSDNNIELRNGFPAEVLF 415
            +D++  LR G P  +  
Sbjct: 317 -ADSDAALRQGMPVTIAV 333



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/127 (11%), Positives = 35/127 (27%), Gaps = 4/127 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +   + G  +  G  L T +     D +   +  ++  +  +   +  L       
Sbjct: 60  GRITQMTFDEGDVVTAGARLATLDAQPYQDALAAAQAQVQVAQAELAKLRRGL----RPQ 115

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++ +     R+ Q      + +           +S  R++    T            +  
Sbjct: 116 EITQAREALRQAQAQALDAERNFQRQSSLLASGASSQRTVDAARTARDQAAAGVESAKAA 175

Query: 185 SSLLRAL 191
            S     
Sbjct: 176 LSQASEG 182


>gi|311109009|ref|YP_003981862.1| hemolysin D [Achromobacter xylosoxidans A8]
 gi|310763698|gb|ADP19147.1| HlyD family secretion family protein 6 [Achromobacter xylosoxidans
           A8]
          Length = 349

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 54/168 (32%), Gaps = 4/168 (2%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           KR  PA + R+  L II +      +       +  S+ +   + +VV + +P  G + K
Sbjct: 6   KRKQPA-IGRLIALVIIALGIFAL-AFAYRRSSNYPSTDDATIDADVVHVATPVGGRLVK 63

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V    ++ +G  L   +       ++  +  +   R  ++T +  L        V ++
Sbjct: 64  LPVRENQRVAKGELLFEIDPEPYRLTVNQAEADLAMARAALETRRRTLIVERANSSVADE 123

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
               R  Q    L                   +        +R   ++
Sbjct: 124 QL--RRAQANHGLAARTEKRLAPLAAQGYVPTQQYDQAQVALRDAEVS 169



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 75/258 (29%), Gaps = 26/258 (10%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           K  V E    ++ E L +   + +          ++    +L+ +   +     N    +
Sbjct: 63  KLPVRENQRVAKGELLFEIDPEPYRLTVNQAEADLAMARAALETRRRTLIVERANSSVAD 122

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +    +A      +    +  L  +  V     +Q +  +  + + L++   +Q     
Sbjct: 123 EQLRRAQANHGLAARTEKRLAPLAAQGYVPTQQYDQAQVALRDAEVSLKQARQQQAAAAE 182

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I                    D  + Q       + L           + +P  G +  
Sbjct: 183 AIG-------------------DEAEAQAAVQAREAALARARHALNDTVVRAPHEGYVTG 223

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI-REK 361
               +       SQ L  +V   +   + A      +  + +G  ATV    Y+ I R +
Sbjct: 224 LSVLT-GETVAPSQSLFTLVAADEWFAV-ANFRETDLARIAEGDCATV----YSMIDRTQ 277

Query: 362 KFKAIIEKIDPIISQQDN 379
             +  +  I   +   + 
Sbjct: 278 AMQGKVVGIGAGVLDGER 295


>gi|270593987|ref|ZP_06221496.1| multidrug resistance protein A-like protein [Haemophilus influenzae
           HK1212]
 gi|270318359|gb|EFA29509.1| multidrug resistance protein A-like protein [Haemophilus influenzae
           HK1212]
          Length = 143

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 4/102 (3%)

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            Q    + ++ L       ++  I SPI G +                 LM +V  ++  
Sbjct: 15  EQPQIQNAINSLKQAWLNLQRTKIRSPIDGYVARRNV-QVGQAVSVGGALMAVV-SNEQM 72

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           ++ A     Q+ +++ G    + F  Y   + K+F  +I  I
Sbjct: 73  WLEANFKETQLTNMRIGQPVKIHFDLYG--KNKEFDGVINGI 112


>gi|253997466|ref|YP_003049530.1| RND family efflux transporter MFP subunit [Methylotenera mobilis
           JLW8]
 gi|253984145|gb|ACT49003.1| efflux transporter, RND family, MFP subunit [Methylotenera mobilis
           JLW8]
          Length = 404

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 64/204 (31%), Gaps = 16/204 (7%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQRTFADEMS 278
             + +S   +R N    +    +   +      EF     L   ++ L+  +        
Sbjct: 99  AQISQSQASVRNNQASVELAQANEKRIRQLYTQEFVSKQELDTAAQALKSAKAQLDSARG 158

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTP 336
            L   +       I SP++G +V          A   Q   L+KI        I +    
Sbjct: 159 LLARDQTNLNFTIIRSPVSGVVVDRVVDVGQTVAASFQTPTLIKIAQDLSKMQINSSFAE 218

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             I ++K G         Y +     F+ +++++    +   N +     Y+V++ +   
Sbjct: 219 ADIGNIKVGQVTKFNVDAYPNRN---FEGVVKQVRLNPTNTSNVVT----YDVVISVD-- 269

Query: 397 AFSDNNIELRNGFPAEVLFTAKNT 420
              +N   L  G  A V       
Sbjct: 270 ---NNEQLLLPGMTAYVNIGVAKR 290



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 68/169 (40%), Gaps = 4/169 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE +VS++G +     +V + +  SGI+KK  V+    + +   LL  ++      I 
Sbjct: 44  GEIEQTVSANGTLNPVT-LVSVGTQISGIVKKLYVDFNDAVKKDQVLLELDNSLFMAQIS 102

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             + S++N +  ++  ++    +   Y    V ++  ++  + L     +  S    +  
Sbjct: 103 QSQASVRNNQASVELAQANEKRIRQLYTQEFVSKQELDTAAQALKSAKAQLDSARGLLAR 162

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +  +  ++  ++ +    +  +     +S     L    +DL+ M+
Sbjct: 163 DQTNLNFTIIRSPVSGVVVDRVVDVGQTVAASFQTPTLIKIAQDLSKMQ 211


>gi|149912595|ref|ZP_01901129.1| secretion protein HlyD [Roseobacter sp. AzwK-3b]
 gi|149813001|gb|EDM72827.1| secretion protein HlyD [Roseobacter sp. AzwK-3b]
          Length = 408

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/176 (11%), Positives = 51/176 (28%), Gaps = 2/176 (1%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +E  + + G ++  D +       +  +    V  G  +  G  L+  +  +    +  
Sbjct: 50  RVEDVLHAFGHVVPADIIRVSMPRHAAPVTDILVNEGDWVDAGQLLVRIDRTDIQRDLLQ 109

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK--YHSTCSKVFNYG 156
            + ++   R  I   +S+L              +  E                ++     
Sbjct: 110 AQATLSATRADIRIARSSLQVAATDIAQRRAELDRLERLAKTGASSEVQRQDATRALQQA 169

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +S    +         S  L RL++E  S+L   +         + K + +     
Sbjct: 170 MSEHEAAKARLAGAQTSETLARLEVERVSTLTDQMDIRAPVAGRVTKIMVDPGDTP 225



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/238 (12%), Positives = 74/238 (31%), Gaps = 21/238 (8%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
                + ++R D++      +A LS+ + D+ + ++  +   V+  D+ Q+   + +   
Sbjct: 91  AGQLLVRIDRTDIQRDLLQAQATLSATRADIRIARSSLQ---VAATDIAQRRAELDRLER 147

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             +     +         L    +   A   +       +       E+ +++ L    +
Sbjct: 148 LAKTGASSEVQRQDATRALQQAMSEHEAAKARLAGAQTSETLARL--EVERVSTLTDQMD 205

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              I +P+AG +         +      P++ +    ++  + A V P  +  V  G   
Sbjct: 206 ---IRAPVAGRVTKIMVD-PGDTPVMGGPVLGLAAADRMEAVLA-VPPHVLARVSVGDPV 260

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            +              A + +I P                V + + D         LR
Sbjct: 261 RL-----WAPDGGMIAADVTRITPSTGPDAGLA------RVAVDLPDGHSHLAGASLR 307


>gi|38510|emb|CAA78903.1| phospholipase c [Homo sapiens]
          Length = 1051

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 81/207 (39%), Gaps = 8/207 (3%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              T  L+D    +    RC +     AL    +  D  E   E++  Q  +F  +   + 
Sbjct: 804  TLTRRLLDGLAQAQAEGRCRL--RPGALGGAADVEDTKEGEDEAKRYQ--EFQNRQVQSL 859

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK- 208
             ++    + +  +     L +        + L+  ++  + L   ++++   ++ + ++ 
Sbjct: 860  LELREAQVDAEAQRRLEHLRQALQRLREVV-LDANTTQFKRLKEMNEREKKELQKILDRK 918

Query: 209  --NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              N++S+  +  + +   + T   R +I E  N +R + E   + +       +++ + L
Sbjct: 919  RHNSISEAKMRDKHKKEAELTEINRRHITESVNSIRRLEEAQKQRHDRLVAGQQQVLQQL 978

Query: 267  EQNQRTFADEMSKLTILEKTREQKTIL 293
             + +     ++++    ++ R  + I 
Sbjct: 979  AEEEPKLLAQLAQECQEQRARLPQEIR 1005


>gi|22124098|ref|NP_667521.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia pestis KIM 10]
 gi|45443587|ref|NP_995126.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51597838|ref|YP_072029.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia
           pseudotuberculosis IP 32953]
 gi|108809689|ref|YP_653605.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia pestis Antiqua]
 gi|108813647|ref|YP_649414.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia pestis
           Nepal516]
 gi|145597608|ref|YP_001161684.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia pestis
           Pestoides F]
 gi|153997378|ref|ZP_02022478.1| putative HlyD family secretion protein [Yersinia pestis CA88-4125]
 gi|162421798|ref|YP_001605719.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia pestis Angola]
 gi|165928300|ref|ZP_02224132.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165937473|ref|ZP_02226036.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011381|ref|ZP_02232279.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166212105|ref|ZP_02238140.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167400628|ref|ZP_02306137.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167420812|ref|ZP_02312565.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167426739|ref|ZP_02318492.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167466810|ref|ZP_02331514.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           FV-1]
 gi|186897031|ref|YP_001874143.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia
           pseudotuberculosis PB1/+]
 gi|218930694|ref|YP_002348569.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia pestis CO92]
 gi|229836837|ref|ZP_04457002.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           Pestoides A]
 gi|229839265|ref|ZP_04459424.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229899829|ref|ZP_04514970.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229904141|ref|ZP_04519252.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           Nepal516]
 gi|270488575|ref|ZP_06205649.1| efflux transporter, RND family, MFP subunit [Yersinia pestis KIM
           D27]
 gi|294505277|ref|YP_003569339.1| putative HlyD family secretion protein [Yersinia pestis Z176003]
 gi|81593721|sp|Q8ZAU9|AAEA_YERPE RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|81638339|sp|Q665H1|AAEA_YERPS RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|123073128|sp|Q1CDW6|AAEA_YERPN RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|123245428|sp|Q1C1L2|AAEA_YERPA RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|158514066|sp|A4THE9|AAEA_YERPP RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|226706836|sp|B2K437|AAEA_YERPB RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|226706837|sp|A9R1V9|AAEA_YERPG RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|21956848|gb|AAM83772.1|AE013617_8 putative membrane protein [Yersinia pestis KIM 10]
 gi|45438457|gb|AAS64003.1| putative HlyD family secretion protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51591120|emb|CAH22785.1| putative HlyD family secretion protein [Yersinia pseudotuberculosis
           IP 32953]
 gi|108777295|gb|ABG19814.1| HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|108781602|gb|ABG15660.1| putative HlyD family secretion protein [Yersinia pestis Antiqua]
 gi|115349305|emb|CAL22273.1| putative HlyD family secretion protein [Yersinia pestis CO92]
 gi|145209304|gb|ABP38711.1| HlyD family secretion protein [Yersinia pestis Pestoides F]
 gi|149289015|gb|EDM39095.1| putative HlyD family secretion protein [Yersinia pestis CA88-4125]
 gi|162354613|gb|ABX88561.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           Angola]
 gi|165914578|gb|EDR33192.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165919688|gb|EDR37021.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165989765|gb|EDR42066.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166206851|gb|EDR51331.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166961618|gb|EDR57639.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167049996|gb|EDR61404.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167054266|gb|EDR64087.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|186700057|gb|ACC90686.1| secretion protein HlyD family protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|229678259|gb|EEO74364.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           Nepal516]
 gi|229687321|gb|EEO79396.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229695631|gb|EEO85678.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229705780|gb|EEO91789.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           Pestoides A]
 gi|262363340|gb|ACY60061.1| putative HlyD family secretion protein [Yersinia pestis D106004]
 gi|262367282|gb|ACY63839.1| putative HlyD family secretion protein [Yersinia pestis D182038]
 gi|270337079|gb|EFA47856.1| efflux transporter, RND family, MFP subunit [Yersinia pestis KIM
           D27]
 gi|294355736|gb|ADE66077.1| putative HlyD family secretion protein [Yersinia pestis Z176003]
 gi|320017146|gb|ADW00718.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 311

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 82/253 (32%), Gaps = 27/253 (10%)

Query: 204 NLFEKN----AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            L +K      + Q    Q            +    E++      + L  +A  +    +
Sbjct: 67  QLVQKGQILFVIDQPRYQQALAEAEADVAYYQTLAAEKQRESSRRHRLGIQALSQ--EEI 124

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            + S  L+  Q   A  ++   +     E+ T+ +P  G +      +   +  +    +
Sbjct: 125 DQASNVLQTVQHQLAKAIAVRDLARLDLERTTVRAPAEGWVTNLNVHA-GEFINRGATAV 183

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +V      YI A +   +++ VK GY A +        R       ++ I   ++   +
Sbjct: 184 ALV-KKDTFYILAYLEETKLEGVKPGYRAEI--TPLGSNR--ILHGTVDSISAGVTNSSS 238

Query: 380 NLQTQEYYEV-----------ILKITDLAFSDNNIELRN-GFPAEVLFTA-KNTTLAQEI 426
           +  ++    +            + +     S++   L   G  A V+ T   +    Q  
Sbjct: 239 SADSKGLATIDNNLEWVRLAQRVPVKIHLDSEDQQYLYPAGTTATVVITGPNDRDPHQ-- 296

Query: 427 IHPITDNWPKIFE 439
             P+T    ++ E
Sbjct: 297 ASPMTKLMHRLRE 309



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/219 (10%), Positives = 62/219 (28%), Gaps = 10/219 (4%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK---NLRCH 109
             +VV I    SG++ +  V++   + +G  L   +       +   +  +     L   
Sbjct: 44  TADVVAIAPDVSGLLTEVPVKDNQLVQKGQILFVIDQPRYQQALAEAEADVAYYQTLAAE 103

Query: 110 IDTEKSALDFL------NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              E S    L        + D      ++ + QL   +         +    + +    
Sbjct: 104 KQRESSRRHRLGIQALSQEEIDQASNVLQTVQHQLAKAIAVRDLARLDLERTTVRAPAEG 163

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
               L      ++NR                   + T ++   +    ++       RI+
Sbjct: 164 WVTNLNVHAGEFINRGATAVALVKKDTFYILAYLEETKLEG-VKPGYRAEITPLGSNRIL 222

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + +   +   +    +          + NLE+    + +
Sbjct: 223 HGTVDSISAGVTNSSSSADSKGLATIDNNLEWVRLAQRV 261


>gi|297300248|ref|XP_002805559.1| PREDICTED: plectin-1 isoform 4 [Macaca mulatta]
          Length = 4546

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2182 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2237

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2238 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2297

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2298 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2357

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2358 EETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2401



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 57/201 (28%), Gaps = 13/201 (6%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1343 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1402

Query: 151  KVFNYGISSVY--RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +     + +    RS++ +L               ++          ++++ +++     
Sbjct: 1403 RREEAAVDAQQQKRSIQEELQXXXXXXXXXXGQARQAEAAERSRLRIEEEIRVVR----- 1457

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                   L   ER    +  EL+      +       +  +EA         E  R   Q
Sbjct: 1458 -----LQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQ 1511

Query: 269  NQRTFADEMSKLTILEKTREQ 289
             +   A  +       + +++
Sbjct: 1512 AEAELALRVKAEAEAAREKQR 1532



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2231 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2290

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2291 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2350

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2351 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2410

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2411 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2441



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1639 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1698

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1699 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1755

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1756 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1807

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1808 LAEEAKRQRQLAEED 1822



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2319 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2378

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2379 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2436

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2437 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2476



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 54/203 (26%), Gaps = 6/203 (2%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  +   +  L        S       + + L +   + E + L  +        ++  
Sbjct: 1318 DLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1377

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  ++ +      + +    +  E  +   +    S Q++L               
Sbjct: 1378 AHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQXXXXXXXXXXGQAR 1437

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLEQ 268
                 ER   +   E+R    + +   R       E         E     ++   + E+
Sbjct: 1438 QAEAAERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAER 1497

Query: 269  NQRTFADEMSKLTILEKTREQKT 291
             +R   DE  +    E     + 
Sbjct: 1498 LRRQVQDESQRKRQAEAELALRV 1520



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1550 RLRQAEVERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1609

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1610 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1669

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1670 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1725

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1726 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1758



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1455 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1508

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1509 KRQAEAE--LALRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1566

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1567 ETAQRSA--EVELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1624

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1625 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1656



 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 68/213 (31%), Gaps = 16/213 (7%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E T L    ++++K      +  +   +    +   LE       EQ            +
Sbjct: 1843 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLE-------EQAAQHKADIEERLA 1895

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYL---NRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            ++     S + R   +    +R         L L+       A  +  + +L  +++  E
Sbjct: 1896 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAE 1955

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR--- 264
                S+     +     +   E  +   E +  ++      +EA  +    L+E+ R   
Sbjct: 1956 DTLRSKEQAELEAARQRQLAAEEEQRRREAEERVQKSLAAEEEAARQRKAALEEVERLKA 2015

Query: 265  ---DLEQNQRTFADEMSKLTILEKTREQKTILS 294
               +  + +     E ++   L +   QK + +
Sbjct: 2016 KVEEARRLRERAEQESARQLQLAQEAAQKRLQA 2048


>gi|262375760|ref|ZP_06068992.1| predicted protein [Acinetobacter lwoffii SH145]
 gi|262309363|gb|EEY90494.1| predicted protein [Acinetobacter lwoffii SH145]
          Length = 407

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 82/277 (29%), Gaps = 20/277 (7%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             + V    + S    + ++        +   DL         L    Q +L + +    
Sbjct: 50  RVATVSRAQVGSEISGVVLQRLVQEGDQVKPGDLLVVLKSDELLAQVRQAELALTELASS 109

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD-- 265
           +   +  +L   +  + +++ E     + +  +L              A    E +R   
Sbjct: 110 RRPQAAAELASAKAQLEQASREATRRRNAEAGILSREEVEQAVEAERVARNNYETARVKA 169

Query: 266 --LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L   Q   A    +L + +    +  I + +AGT++  +     +  Q  Q L  I  
Sbjct: 170 AVLAAGQVEEASLREQLAVAQAQLAKTKIRAAVAGTVLT-RDVEPGDLVQPGQTLFTIAL 228

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 IR  +  + +  +     ATV    Y D       A I  I P I  Q   +  
Sbjct: 229 TGNT-EIRVPLDERNLPQLALQQNATVISDAYPDQSFP---ARINFIAPSIDPQRGTV-- 282

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               EV L +  +        LR      V       
Sbjct: 283 ----EVRLTVNPV-----PDFLRQDMTVSVNVETAKR 310



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 57/156 (36%), Gaps = 2/156 (1%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  +V ++G +        + S  SG++ +  V+ G Q+  G  L+  +  E    +  
Sbjct: 40  PLVQNVVATGRVATVSRAQ-VGSEISGVVLQRLVQEGDQVKPGDLLVVLKSDELLAQVRQ 98

Query: 99  KKVSIKNL-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            ++++  L         + L     + +   +    R       L +     +       
Sbjct: 99  AELALTELASSRRPQAAAELASAKAQLEQASREATRRRNAEAGILSREEVEQAVEAERVA 158

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
            + Y + ++K   + +  +    L  + ++ +A L+
Sbjct: 159 RNNYETARVKAAVLAAGQVEEASLREQLAVAQAQLA 194


>gi|257453372|ref|ZP_05618668.1| heavy metal RND efflux membrane fusion protein, CzcB family
           [Enhydrobacter aerosaccus SK60]
 gi|257449239|gb|EEV24186.1| heavy metal RND efflux membrane fusion protein, CzcB family
           [Enhydrobacter aerosaccus SK60]
          Length = 499

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 24/171 (14%)

Query: 252 NLEFANYLKEISRDLEQNQRTFADEM-------SKLTILEKTREQKTILSPIAGTIVYNQ 304
             EF   L+   R L Q  R     +        ++    + +   T+ +PI+G I   +
Sbjct: 173 QTEFLAVLRTGDRSLIQASRQRLQLLGIPQNVIHQVERTRRVQSHITLQAPISGFIDSLE 232

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q L  I   +   ++ A V  KQI  +K+G +    F  ++     K  
Sbjct: 233 VRN-GMALAMGQTLATIKGIN-PIWLEAAVPEKQIAGIKRGMSVEANFAAFSQ----KVT 286

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  I P +      +      +V +++ + +      +L+ G  A V  
Sbjct: 287 GKVIDILPTLDTTSRTI------KVRIELPNPS-----GQLKPGMFASVNI 326


>gi|254883450|ref|ZP_05256160.1| multidrug resistance protein MexA [Bacteroides sp. 4_3_47FAA]
 gi|319641763|ref|ZP_07996444.1| multidrug resistance protein MexA [Bacteroides sp. 3_1_40A]
 gi|254836243|gb|EET16552.1| multidrug resistance protein MexA [Bacteroides sp. 4_3_47FAA]
 gi|317386597|gb|EFV67495.1| multidrug resistance protein MexA [Bacteroides sp. 3_1_40A]
          Length = 383

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 71/191 (37%), Gaps = 15/191 (7%)

Query: 55  NVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +V  I+         G ++K  V+ G ++ +G PL      + ++ +   + + K  +  
Sbjct: 54  DVQAIQFVEIKPKVEGFVQKIYVDEGQKVKKGQPLFQLSSDQYSETVKEAQANYKQAQAQ 113

Query: 110 IDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            +    E   +  L +K  + +   +   ++      K     +++    +   Y ++  
Sbjct: 114 YEMANYEAERIGRLVDKQILSKIRLDQANKEKEVAQMKVEQAKAQMQRSQMDYSYTTITA 173

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                   Y++R+  +  S +    L +   D++    +F    V++++  + +R     
Sbjct: 174 PFDG----YIDRIPYKTGSLVNPQSLLTTVSDIS---EIFAYYKVNESEYLEYKRQQLSG 226

Query: 227 TLELRENIHEQ 237
             +  EN  E 
Sbjct: 227 QKQHEENNVEL 237



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 21/134 (15%)

Query: 208 KNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +  V +  +++ +++     L +L  + + +       N    +A  E ANY  E    L
Sbjct: 68  EGFVQKIYVDEGQKVKKGQPLFQLSSDQYSETVKEAQANYKQAQAQYEMANYEAERIGRL 127

Query: 267 EQ------------------NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                                Q       +++   +      TI +P  G I      + 
Sbjct: 128 VDKQILSKIRLDQANKEKEVAQMKVEQAKAQMQRSQMDYSYTTITAPFDGYIDRIPYKT- 186

Query: 309 SNYAQQSQPLMKIV 322
            +     Q L+  V
Sbjct: 187 GSLVNP-QSLLTTV 199


>gi|224373459|ref|YP_002607831.1| secretion protein HlyD [Nautilia profundicola AmH]
 gi|223588784|gb|ACM92520.1| secretion protein HlyD [Nautilia profundicola AmH]
          Length = 345

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 91/297 (30%), Gaps = 54/297 (18%)

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            DV   +      +++ ++ K +     V   G            + +       L  ++
Sbjct: 36  ADVYSPSQVMVATRVMGYIKKINVEEGDVVKKGQELFVVDPNDIYSMLNQARGALLQAQS 95

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
              +     +  +KD    KNL+E  AVS+ D  + + ++                    
Sbjct: 96  GVLMAEMAYADAKKDYERFKNLYENGAVSKRDFEKMKLMMDIRK---------------- 139

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                               + ++  +       + L++ E   +   + SPI G +V  
Sbjct: 140 --------------------KQVDMAKGMLKQAKAGLSMAENQLKYAKVKSPIDG-VVTM 178

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +    +  A    P++ ++        ++ V  + I   K G   T++ P      +K+F
Sbjct: 179 KMKKVAEMALPGYPVL-VLSDIHNLKAKSFVKEEDIDKFKIGMPVTIKVPA----IKKEF 233

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            A +  I P      ++      Y V    T      N   L  G  A+ +      
Sbjct: 234 SAKVSTIIPSADPATHS------YIVKYTFT------NTKGLLPGMYAKAVVNIAKK 278



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 12/134 (8%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V S  +++    V+       G IKK  VE G  + +G  L   +  +   +++  + ++
Sbjct: 38  VYSPSQVMVATRVM-------GYIKKINVEEGDVVKKGQELFVVDPNDIYSMLNQARGAL 90

Query: 104 KN-----LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                  L   +    +  D+   K      A   R+ + +  +         +    + 
Sbjct: 91  LQAQSGVLMAEMAYADAKKDYERFKNLYENGAVSKRDFEKMKLMMDIRKKQVDMAKGMLK 150

Query: 159 SVYRSLKMKLTRMR 172
                L M   +++
Sbjct: 151 QAKAGLSMAENQLK 164


>gi|172038210|ref|YP_001804711.1| chromosome segregation protein SMC [Cyanothece sp. ATCC 51142]
 gi|171699664|gb|ACB52645.1| chromosome segregation protein SMC [Cyanothece sp. ATCC 51142]
          Length = 1221

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 73/208 (35%), Gaps = 6/208 (2%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             +          +K+S+      +   K   + L+++  ++         +L     + 
Sbjct: 773 QLDKEIQRLTTQQQKLSL-----QLSRHKQEAETLDSQLKIMAAEIPPLTTELQQKQDRL 827

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                   +     +   +K + T+++         ENK   +   LSS ++ +   ++ 
Sbjct: 828 RKLEESHTHSEWQEIQTLIKSQETQLQERENELRQGENKRQEIERQLSSLEEKIKENQDK 887

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +        LN  +  + +    L + I   + +L  + +   E   E  N  +++   
Sbjct: 888 IKAQREQIVKLNNDKIEIAEQLETLNDKISNLERLLEELTQKLGETKKERDNTEEQLKTV 947

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTIL 293
            + +Q+   + + KL   ++ R++  I 
Sbjct: 948 QKNHQQKIWN-LEKLQTTQQERKETLIT 974


>gi|89896572|ref|YP_520059.1| hypothetical protein DSY3826 [Desulfitobacterium hafniense Y51]
 gi|89336020|dbj|BAE85615.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 396

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 92/290 (31%), Gaps = 38/290 (13%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +++    G   S    +     SS+      K    + +    ++ E+   L +    + 
Sbjct: 71  QEIPVKAGDKVSKGQIILVMDTSSLSAEASQKDLECKELRAKIINSESNIRLFQQAYDTA 130

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           QKD    K L E  A S  +L Q  + V ++   L   + EQ+  L  +    ++A + +
Sbjct: 131 QKDYNNTKVLMESGAASLKELEQAGQKVTEAQENL---VVEQEANLPLLKAQLEQAEVLY 187

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                       ++  ++ TI SP  GT++     +     +  
Sbjct: 188 QK-------------------------AQEKLQKATIHSPYDGTVLNLAVKA-GQEVENG 221

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L +I  +     I   +       +K G    +         ++     IE I P   
Sbjct: 222 TLLAQIG-NPAQLLIETGINEVDAALLKVGDQVEITNSAL---LKEPLLGSIETIAPTAE 277

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE--VLFTAKNTTLA 423
               +   Q   ++ + +     ++    L+ GF     V+   K   L 
Sbjct: 278 VVATSQGEQTQVKIRISVPA---TEGESPLKPGFNVNLKVILQQKEQALL 324



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 63/157 (40%), Gaps = 5/157 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E +V +SG++  + ++ E K+     +++  V+ G ++ +G  +L  +    +     K 
Sbjct: 45  EQNVFASGKLEVK-DLAEFKADTKTTVQEIPVKAGDKVSKGQIILVMDTSSLSAEASQKD 103

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  K LR  I   +S +      YD  +K + + +      +    ++  ++   G    
Sbjct: 104 LECKELRAKIINSESNIRLFQQAYDTAQKDYNNTK----VLMESGAASLKELEQAGQKVT 159

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                + + +  ++ L +  LE    L +      QK
Sbjct: 160 EAQENLVVEQEANLPLLKAQLEQAEVLYQKAQEKLQK 196


>gi|148254197|ref|YP_001238782.1| putative RND efflux membrane fusion protein [Bradyrhizobium sp.
           BTAi1]
 gi|146406370|gb|ABQ34876.1| putative RND efflux membrane fusion protein [Bradyrhizobium sp.
           BTAi1]
          Length = 371

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 65/200 (32%), Gaps = 21/200 (10%)

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            + +      +L+      +N       +  + + E   +       L+ ++    +  +
Sbjct: 98  LQLVATDDVAKLQSLQATAENY-----AIVVKRDEEQIKFNAVSQATLDSDRANLKNAQA 152

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
            +T  +   EQKT+ +P AG  +  ++     Y      ++ +       ++   +  + 
Sbjct: 153 LVTQQKAIVEQKTLKAPFAGR-LGIRAVDLGQYLGAGTTIVTLQ-SLDPIFVDFYLPQQS 210

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           +  ++ G    V    +   R   F   I  I+  +     N        V ++ T    
Sbjct: 211 LAEIRIGQDVGVAVDAFPGER---FTGQISAINAKVDSTSRN--------VQVRAT---L 256

Query: 399 SDNNIELRNGFPAEVLFTAK 418
            +N   L  G  A+V     
Sbjct: 257 RNNQARLLPGMFAKVEIATG 276



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 37/119 (31%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI++  Q  +G  +  G PLL     +    +   + + +N    +  ++  + F     
Sbjct: 78  GIVQSIQFNSGDSVEAGQPLLQLVATDDVAKLQSLQATAENYAIVVKRDEEQIKFNAVSQ 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             L+    + +        +      K      +       + L +        + L++
Sbjct: 138 ATLDSDRANLKNAQALVTQQKAIVEQKTLKAPFAGRLGIRAVDLGQYLGAGTTIVTLQS 196


>gi|332343362|gb|AEE56696.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 285

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 59  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 117

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 118 AEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 176

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 177 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 227

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 228 RAIYDQS 234



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 156


>gi|325288424|ref|YP_004264605.1| secretion protein HlyD family protein [Syntrophobotulus glycolicus
           DSM 8271]
 gi|324963825|gb|ADY54604.1| secretion protein HlyD family protein [Syntrophobotulus glycolicus
           DSM 8271]
          Length = 233

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 49/140 (35%), Gaps = 11/140 (7%)

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           +  +  I++P+ G I+             +Q L  I+ ++   YI A +   +I  ++ G
Sbjct: 99  SISKAEIVAPVTGQIIKTAV-QEGEIVNPNQTLA-IIANTNDIYISANIEENKISRIRIG 156

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI--LKITDLAFS 399
               +       +  + F+  + +I    +           +  + +V   + I      
Sbjct: 157 QPVDITI---DSVPGQTFQGKVSEIGQATASTFSIISAQNSSGTFTKVTQLIPIKIRFPI 213

Query: 400 DNNIELRNGFPAEVLFTAKN 419
             +++L  G  AE+      
Sbjct: 214 HPDLQLLPGISAEIRIHLAE 233


>gi|212211840|ref|YP_002302776.1| macrolide-specific efflux protein [Coxiella burnetii CbuG_Q212]
 gi|212010250|gb|ACJ17631.1| macrolide-specific efflux protein [Coxiella burnetii CbuG_Q212]
          Length = 391

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 33/285 (11%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           L     T +K+F    +SV  +  +     + +  +  D   K    +    +  K    
Sbjct: 64  LSPVDGTVTKLFFTYGASVEENQNIVEIHSQKLAEDYRDAVTKYLQAKDTYETSLKSFAG 123

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L+E   +S+ +  + ER  + + +               +N       LE      +
Sbjct: 124 TRALYEAGIISEEEF-RTERSQHDTNV---------------LNFYQARFTLEKVLREAD 167

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV----------YNQSFSSSNY 311
           I     +  R  AD  +   IL+K      + SP  G  +                    
Sbjct: 168 IDPKTVEGLR-IADINAVAQILQKHFRHILVKSPGKGVALFPVKSEDDKDGKGRLVVGTE 226

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +Q Q ++ I        I  +V+   I  +  G  ATV    +  I       I+  + 
Sbjct: 227 VKQGQLILSIG-DLSGFTITLQVSEININRLHSGLKATVTGDAFPGIT---LHGIVTAVA 282

Query: 372 PIIS-QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              + +Q         + + +++  +     N+ +  G  A V  
Sbjct: 283 RQSNPEQSEGDGALSTFNIEVQVPGVTKEQRNV-IHVGMSATVEI 326


>gi|2351221|dbj|BAA22068.1| myosin heavy chain [Cyprinus carpio]
          Length = 1931

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 81/214 (37%), Gaps = 12/214 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ----LLDFLG 143
            +  E+ + +  K  S++  +  +  E   L     + + L    + ++      L ++  
Sbjct: 1397 DAEESIEAVSSKCASLEKTKQRLQGEVEDLMIDGERANALAANLDKKQRNFDKVLAEWKQ 1456

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY  + +++      +  RSL  +L +M++ Y   LD       L+    + Q++++ + 
Sbjct: 1457 KYEESQAELEAAQKEA--RSLSTELFKMKNSYEEALD---HLETLKRENKNLQQEISDLS 1511

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                +   S ++L + ++IV     E++  + E ++ L H         LE      EI 
Sbjct: 1512 EQLGETGKSIHELEKAKKIVESEKAEIQTALEEAESTLEHEESKILRVQLELNQVKSEID 1571

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQK---TILS 294
            R L +              +  + +      I S
Sbjct: 1572 RKLAEKDEEIEQIKRNSQRVMDSMQSTLDSEIRS 1605



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 83/241 (34%), Gaps = 22/241 (9%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREE--QL 138
            L  +  +T   +  +  +++ ++  ++ EKS     +D L +  + + KA  + E+  + 
Sbjct: 1190 LRKKQADTVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLTSNMEAVAKAKGNLEKMCRT 1249

Query: 139  LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            L+         S   +  ++ +        T          + E   S L     +  + 
Sbjct: 1250 LEDQLSEIKAKSDENSRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQ 1309

Query: 199  LTMMKNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  ++   E+   ++N L               +Q     ++  EL+  + +  + +   
Sbjct: 1310 IEDLQRHVEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKTELQRGMSKANSEVAQW 1369

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               Y+   ++    L+E  + L Q  +   + +  ++    + E+      + G +    
Sbjct: 1370 RAKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVSSKCASLEKTKQR--LQGEVEDLM 1427

Query: 305  S 305
             
Sbjct: 1428 I 1428



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 72/226 (31%), Gaps = 20/226 (8%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  +       ++      +     ++ EK   D    K D     F S+ E       +
Sbjct: 1042 LRMDLERVKRKLEGDLKLAQESIMDLENEKQQSDEKIKKKDFEISQFLSKIEDEQSLGAQ 1101

Query: 145  YHSTCSKVFNYGISSVYR-----SLKMKLTRMRSIYLNRLD-----LENKSSLLRALLSS 194
                  ++               S + K+ + R+     L+     LE       A +  
Sbjct: 1102 LQKKIKELQARIEELEEEIEAERSARAKVEKQRADLSRELEEISERLEEAGGATAAQIEM 1161

Query: 195  HQKD----LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            ++K       M ++L E     +       +    +  EL E I   + + + + +   E
Sbjct: 1162 NKKREADFQKMRRDLEESTLQHEATAAALRKKQADTVAELGEQIDNLQRVKQKLEKEKSE 1221

Query: 251  ANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +E  +       + +   +LE+  RT  D++S++        ++
Sbjct: 1222 YKMEIDDLTSNMEAVAKAKGNLEKMCRTLEDQLSEIKAKSDENSRQ 1267



 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 76/255 (29%), Gaps = 38/255 (14%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID--------TEKSALDF------LN 121
             + ++G   +  +         L +  I+ LR  ++         E+  +D       L+
Sbjct: 1656 DEAVRGQEDMKEQVAMVERRNTLMQAEIEELRAALEQTERGRKVAEQELVDASERVGLLH 1715

Query: 122  NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL--TRMRSIYLNRL 179
            ++   L    +  E  LL   G+      +  N    +        +    ++       
Sbjct: 1716 SQNTSLINTKKKLETDLLQVQGEVDDAVQEARNAEEKAKKAITDAAMMAEELKKEQDTSA 1775

Query: 180  DLENKSSLLRALLSSHQKDLTMMKNLFEKN-------AVSQNDLNQQE------------ 220
             LE     +   +   Q  L   ++L  K          S+    + E            
Sbjct: 1776 HLERMKKNMEVTVKDLQHRLDEAESLAMKGGKKQLQKLESRVHELEAEVEAEQRRGADAV 1835

Query: 221  ---RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               R   +   EL     E K  +  + +L D+  L+   Y ++     EQ     +   
Sbjct: 1836 KGVRKYERRVKELTYQTEEDKKSVTRLQDLVDKLQLKVKAYKRQAEEAEEQANTHLSRYR 1895

Query: 278  SKLTILEKTREQKTI 292
                 LE++ E+  I
Sbjct: 1896 KVQHELEESHERADI 1910


>gi|148262171|ref|YP_001228877.1| RND family efflux transporter MFP subunit [Geobacter uraniireducens
           Rf4]
 gi|146395671|gb|ABQ24304.1| efflux transporter, RND family, MFP subunit [Geobacter
           uraniireducens Rf4]
          Length = 468

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 64/191 (33%), Gaps = 19/191 (9%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +L     E    L+   +L +      A   + +     Q       +  +L  LEK+ +
Sbjct: 167 DLVSAQQEYLLALKSREQLKNSPIQSIAQGGEGLVASARQRLILLGVKDEQLAGLEKSGQ 226

Query: 289 ---QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              + +I +P++G ++  +      Y     PL  I       ++  +V   +   +K G
Sbjct: 227 PNIRLSIYTPLSGIVIE-KIALEGQYVNTGDPLFNIA-DLSSVWVEVEVYENEFSFIKIG 284

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
               +    Y     K F+  +  I P +  +   +      +V ++I      +  ++L
Sbjct: 285 QAVDIVSQSYP---GKTFRGRVAFIYPFLDPKTRTV------KVRVEIP-----NPGLKL 330

Query: 406 RNGFPAEVLFT 416
           +          
Sbjct: 331 KPDMFVNASVK 341


>gi|86148766|ref|ZP_01067037.1| membrane-fusion protein [Vibrio sp. MED222]
 gi|85833444|gb|EAQ51631.1| membrane-fusion protein [Vibrio sp. MED222]
          Length = 368

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  F    + +  L+ + E++ I +P  G +   ++     Y Q       IV     
Sbjct: 142 EAEANFYSLSADIESLKASIERREIRAPFDGKV-GIRNVYLGQYLQSGT---DIVRLEDT 197

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V+   I  +  G    +    Y    EK F+  I  I+P +S Q   +Q Q 
Sbjct: 198 SVMRLRFTVSQTDISRIHVGQAIDIFVDAYP---EKPFEGSISAIEPAVSIQSGLIQVQ- 253

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +N+ +LR+G  A    
Sbjct: 254 ----------ADIPNNDGKLRSGMFARANI 273


>gi|157156525|ref|YP_001465062.1| membrane fusion protein family protein [Escherichia coli E24377A]
 gi|157078555|gb|ABV18263.1| membrane fusion protein (MFP) (TC 8.A.1) family [Escherichia coli
           E24377A]
          Length = 378

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|331647133|ref|ZP_08348227.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli M605]
 gi|331043916|gb|EGI16052.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli M605]
          Length = 288

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 62  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 120

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 121 AEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 179

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 180 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 230

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 231 RAIYDQS 237



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 4   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 59

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 60  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 119

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 120 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 159


>gi|323484151|ref|ZP_08089521.1| auxiliary transporter [Clostridium symbiosum WAL-14163]
 gi|323693204|ref|ZP_08107422.1| hypothetical protein HMPREF9475_02285 [Clostridium symbiosum
           WAL-14673]
 gi|323402593|gb|EGA94921.1| auxiliary transporter [Clostridium symbiosum WAL-14163]
 gi|323502687|gb|EGB18531.1| hypothetical protein HMPREF9475_02285 [Clostridium symbiosum
           WAL-14673]
          Length = 476

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 77/246 (31%), Gaps = 34/246 (13%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
            N  D ++K        ++ + +    K LF+   +S  DL      +  +  E      
Sbjct: 184 ENIRDTQHKYEKAVQDYNTAKLNYDRNKVLFDAGDISSADLEAAGNTLKDAAREKDSFTV 243

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           E+   +           L+  +   E+ +                   +K  E   + SP
Sbjct: 244 EKGKAMPD-----KSYELKVKSAQFELEQK------------------KKDLENAEVKSP 280

Query: 296 IAGTIVYNQSFSSSNYA--QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           I GT+V   S     +A   + +  M IV +     +   V+   I  V+ G  A +   
Sbjct: 281 ITGTVVRVNS-KVGQFADKPEDEKPMFIVENLDNLEMEIAVSEYSISKVRVGQKAQI--D 337

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
               +  K  +  +  I P   ++     ++      ++I   A +     L  G  A+ 
Sbjct: 338 A-DILNGKSEEGEVVSISP-TGEEKGGGSSERVVPATIRIAGGASNG----LIAGITAKA 391

Query: 414 LFTAKN 419
                 
Sbjct: 392 SLVTGE 397



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 6/38 (15%), Positives = 17/38 (44%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  V+ G ++ +G  L   +  +    +D+ + S  
Sbjct: 139 VLQIMVKEGDRVKKGQILALIDSSDAQKAVDIAQNSYD 176


>gi|312129838|ref|YP_003997178.1| efflux transporter, rnd family, mfp subunit [Leadbetterella
           byssophila DSM 17132]
 gi|311906384|gb|ADQ16825.1| efflux transporter, RND family, MFP subunit [Leadbetterella
           byssophila DSM 17132]
          Length = 356

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 96/290 (33%), Gaps = 42/290 (14%)

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYR-----SLKMKLTRMRSIYLNRLDLENKSSL 187
            +EE L  +     S+   V +  I    +      L  K+T      L  +  E K   
Sbjct: 24  PKEESLPSYELIQPSSELNVSDLSIPGELQPFYSVDLYAKVTGFVQRILVDVGSEVKQGQ 83

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           L ALL + +        +  +   ++  L+ QE +   S+  LR            I   
Sbjct: 84  LLALLEAPE--------MKAQINAAEAKLHAQEAVYAASSATLRRL-----EETSKIPGT 130

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                LE A   ++      +  +    E+S++           I +P +G++   ++ +
Sbjct: 131 IAPLELELAKAKQQADLAQLEAAKAAYREVSQMQ------SYLEIRAPFSGSVTA-RNIA 183

Query: 308 SSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
              Y   +   PL+ +V   +   +   V       +       + F     +  K+F+ 
Sbjct: 184 PGAYVGPNGHGPLLTLV-QDQKLRLVVHVPETYAGAISSDSP--IHFT-IHSLPGKEFQG 239

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + +    + Q+  +          ++I      + N +L  G  A+V  
Sbjct: 240 KVSRNAQTLDQKFRSQ--------RIEID---VPNENKKLLPGMVAQVKI 278



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 31/98 (31%), Gaps = 1/98 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V+ GS++ QG  L   E  E    I+  +  +           + L  L  + 
Sbjct: 66  GFVQRILVDVGSEVKQGQLLALLEAPEMKAQINAAEAKLHAQEAVYAASSATLRRL-EET 124

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
             +       E +L     +      +        V +
Sbjct: 125 SKIPGTIAPLELELAKAKQQADLAQLEAAKAAYREVSQ 162


>gi|255068117|ref|ZP_05319972.1| HlyD family secretion protein [Neisseria sicca ATCC 29256]
 gi|255047632|gb|EET43096.1| HlyD family secretion protein [Neisseria sicca ATCC 29256]
          Length = 351

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/310 (10%), Positives = 82/310 (26%), Gaps = 46/310 (14%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E A     + L +   +  ++  +           ++         +       +   
Sbjct: 60  VEEGADVKEGDILAELSSETSNSRLEEARAAELRQEEAVGRAKAAEAQMKQTVARAQANV 119

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              R  L   + +L   + L     VSQ+++ +++    ++   ++     +      + 
Sbjct: 120 DANRQQLRVAKMELDNARKLLADQLVSQSEVTKRQADYERAVAAIKAAEAARDEARATVA 179

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +         A                     + +       +   I +PIAG +     
Sbjct: 180 QSAAAQAEARAG---------------VEQARAAVKAATSANDDMNIRAPIAGRV-EYTI 223

Query: 306 FSSSNYAQQSQPLMKIV-PHSKLTYI--------------RAKVTPKQIQHVKKGYTATV 350
             + N       ++ ++ P      I               A++    I  V     A +
Sbjct: 224 AEAGNVVAAGSKVVSLLDPADVSMNIFLPTDSMSRLKVNDDARIRLDGIDAVF---PAKI 280

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           +F         K    +E +D          + +  ++V L++        N  L+ G  
Sbjct: 281 KFIATDAQFTPK---SVETVD---------ERAKLMFKVKLQVPRETAVKYNRLLKGGLT 328

Query: 411 AEVLFTAKNT 420
                     
Sbjct: 329 GNGFVKTDAK 338



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 39/105 (37%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           N +++ S + G +K   VE G+ + +G  L       +   ++  + +       +   K
Sbjct: 43  NRIDVASLYPGRVKAVLVEEGADVKEGDILAELSSETSNSRLEEARAAELRQEEAVGRAK 102

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +A   +       +   ++  +QL     +  +    + +  +S 
Sbjct: 103 AAEAQMKQTVARAQANVDANRQQLRVAKMELDNARKLLADQLVSQ 147


>gi|148658156|ref|YP_001278361.1| RND family efflux transporter MFP subunit [Roseiflexus sp. RS-1]
 gi|148570266|gb|ABQ92411.1| efflux transporter, RND family, MFP subunit [Roseiflexus sp. RS-1]
          Length = 621

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/336 (11%), Positives = 88/336 (26%), Gaps = 22/336 (6%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-YDVLEKAFESREEQLLDFLGKYHST 148
                 ++     +   +    T K   +++     D + +                + +
Sbjct: 215 TNAQIQLEQAVNQLTQAQSRYSTAKQNWEYVRETGADPIVRTVADPNRPGQTRPNILNDS 274

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             + +         +L+     +    +N  +     +    L           ++L   
Sbjct: 275 QRQQYYDAFVQAEATLRSAENAVAQAQVNYDNARLAEANGVELAEGQLAVARANRDLLF- 333

Query: 209 NAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYLKEISR--D 265
            A  + D+    R    S    L     +Q+           EA       L+   R  D
Sbjct: 334 -ATPEPDVLAAARAQVASARAALDRMRGDQRGGQLEAARAAFEAAKANLERLRADPRPAD 392

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L   +       +   +   T ++  + +P  G +               +P   IV  +
Sbjct: 393 LAAARAQVDAARAARDLARLTLDEAVLKAPFNGVVAEVNL-KVGEAPSPGRPA--IVLAN 449

Query: 326 -KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
            +  Y+   V    I  V  G   T+      ++      A +E I P+   Q       
Sbjct: 450 LERFYVDVTVDEIDIIRVSVGQPVTLTLDALPEVT---LAATVETIGPLALPQAAVTS-- 504

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             Y+V +        + +  +R G            
Sbjct: 505 --YQVRI-----GIPNTDPRVRAGMSVGADIVVAER 533



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 77/259 (29%), Gaps = 12/259 (4%)

Query: 37  LLPIEISVSSSGEILNEDNVVEI--KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
              +  +V+++G+I     V  +      +G + +  V  G  + +G PL   +  E   
Sbjct: 53  FDRLIATVNATGQIAP---VQTVNLSFAVTGRVAEVLVRPGDPVEKGQPLARLDTRELEL 109

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   +  +   + ++D   +    L+ +    E        QL    G       +   
Sbjct: 110 RLAQAEAQLAQAQANLDRLLAGP--LSAEIAAAEAQLAQAAGQLRQVEGSVTVADMRAAE 167

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +      L   L   R   +   +   + + L   L   +  L+  K   +       
Sbjct: 168 EQLRQAEARLNQLLNGPRESDVQTAEARIREAELN--LERQRTQLSTAKTNAQIQLEQAV 225

Query: 215 DLNQQERIVYKSTLELRENIHEQKNM-LRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +   Q +  Y +  +  E + E     +       +       N L +  R   Q    F
Sbjct: 226 NQLTQAQSRYSTAKQNWEYVRETGADPIVRTVADPNRPGQTRPNILNDSQRQ--QYYDAF 283

Query: 274 ADEMSKLTILEKTREQKTI 292
               + L   E    Q  +
Sbjct: 284 VQAEATLRSAENAVAQAQV 302


>gi|127758|sp|P05659|MYSN_ACACA RecName: Full=Myosin-2 heavy chain, non muscle; AltName: Full=Myosin
            II heavy chain, non muscle
 gi|5586|emb|CAA68663.1| myosin heavy chain [Acanthamoeba castellanii]
          Length = 1509

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 67/183 (36%), Gaps = 19/183 (10%)

Query: 128  EKAFESREEQLLDFLGKYHS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            +K  +  ++Q+ D   +  +    +   +                + ++ L  LDLE + 
Sbjct: 855  QKEIDDLKKQVKDLEKELAALKDANAKLDKEKQLAEEDADKLEKDLAALKLKILDLEGEK 914

Query: 186  SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            + L    +  QK +  ++   ++   + ND+ +Q+R +     EL+ ++ E++   + + 
Sbjct: 915  ADLEEDNALLQKKVAGLEEELQEETSASNDILEQKRKLEAEKGELKASLEEEERNRKALQ 974

Query: 246  ELYDEANLEFANYL-----------------KEISRDLEQNQRTFADEMSKLTILEKTRE 288
            E   +   E                      +++SR+L + +   AD  +    L    +
Sbjct: 975  EAKTKVESERNELQDKYEDEAAAHDSLKKKEEDLSRELRETKDALADAENISETLRSKLK 1034

Query: 289  QKT 291
               
Sbjct: 1035 NTE 1037



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 76/210 (36%), Gaps = 8/210 (3%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALD---FLNNKYDVLEKAFESREEQLLDFLGKY 145
            +       +L K +++      + + +A D    + +   +     E+R +   +   K 
Sbjct: 1273 EARAAAEKNLDKANLELEELRQEADDAARDNDKLVKDNRKLKADLDEARIQLEEEQDAKS 1332

Query: 146  HS-TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD----LT 200
            H+ + S+     I  + + +  + +  +     + + + ++  L+A   S ++       
Sbjct: 1333 HADSSSRRLLAEIEELKKRVAKETSDKQKAQDQKANYQRENESLKADRDSIERRNRDAER 1392

Query: 201  MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             +++L  +   + + L+ ++R   KS    RE      +  R   E   + N    +  +
Sbjct: 1393 QVRDLRAQLDDALSRLDSEKRAKEKSVEANRELKKVVLDRERQSLESLSKFNSALESDKQ 1452

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +  ++           +K+  L+   +  
Sbjct: 1453 ILEDEIGDLHEKNKQLQAKIAQLQDEIDGT 1482



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 22/211 (10%), Positives = 63/211 (29%), Gaps = 12/211 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE--EQLLDFLGKYHST 148
            +    ++  +  + +L+  +   + +L    ++   L++  E        +D   K    
Sbjct: 1091 QLGQQLEDARSEVDSLKSKLSAAEKSLKTAKDQNRDLDEQLEDERTVRANVDKQKKALEA 1150

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD----LTMMKN 204
                    ++++         + +++     + + +     A  +  +K+    L  +  
Sbjct: 1151 KLTELEDQVTALDGQKNAAAAQAKTLKTQVDETKRRLEEAEASAARLEKERKNALDEVAQ 1210

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL----- 259
            L       ++   QQ R +     EL+  +          +E       E          
Sbjct: 1211 LTADLDAERDSGAQQRRKLNTRISELQSELENAPKTGGASSEEVKRLEGELERLEEELLT 1270

Query: 260  -KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             +E     E+N      E+ +L        +
Sbjct: 1271 AQEARAAAEKNLDKANLELEELRQEADDAAR 1301


>gi|221199115|ref|ZP_03572160.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Burkholderia multivorans CGD2M]
 gi|221205373|ref|ZP_03578389.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Burkholderia multivorans CGD2]
 gi|221175164|gb|EEE07595.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Burkholderia multivorans CGD2]
 gi|221181566|gb|EEE13968.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Burkholderia multivorans CGD2M]
          Length = 323

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 73/223 (32%), Gaps = 27/223 (12%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + +      ER+   +  + R  + + K   R         NL  +  ++E    +EQ 
Sbjct: 79  VIDRARYALAERLAEATLAQRRATLAQAK---REYARNLQLGNLVASEQVEESRTRVEQG 135

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +    D    L   +   ++ T++SP+ G  + +++     Y    + ++ +V       
Sbjct: 136 EAAVQDAQVSLDTAKLNLQRTTVVSPVDGY-LNDRAPRVGEYVPAGRAVLSVV-DRNSFR 193

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----- 384
           +       +++ +  G    +    +        +  ++ I   I  +D    +      
Sbjct: 194 VDGYFEETKLRGIHIGQPVDI----FVMGEPHSLRGHVQSIVAAIEDRDRTQGSNLLPNV 249

Query: 385 ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                     +   V + + ++    ++  +  G  A V   A
Sbjct: 250 NPAFSWVRLAQRVPVRVALDEV---PDDFRMIAGRTATVAVRA 289



 Score = 39.6 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 6/118 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++    SG+I   +V +   + +G  L   +         L + ++   R  + 
Sbjct: 45  VRADVIQVAPDVSGLITSVEVADNQAVTRGQVLFVIDRARYALAERLAEATLAQRRATLA 104

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             K            L+       EQ+ +   +     + V +  +S     L ++ T
Sbjct: 105 QAKREYAR------NLQLGNLVASEQVEESRTRVEQGEAAVQDAQVSLDTAKLNLQRT 156


>gi|83594565|ref|YP_428317.1| secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
 gi|83577479|gb|ABC24030.1| Secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
          Length = 391

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 59/177 (33%), Gaps = 22/177 (12%)

Query: 19  RMTLLSIIGIIGLITWSI-------------------LLPIEISVSSSGEILNEDNVVEI 59
            + +L ++    L  W++                   L  +E ++++ G +  +  V ++
Sbjct: 17  LVLILGLLAACALGAWALGWFGANGDKAPPPRQQTVELGSVENAITAVGSLQPKTYV-DV 75

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
            +  SG +    V  G ++ +G  L   +       +   K ++  L       ++ L  
Sbjct: 76  GAQVSGKVSHLPVVIGDRVEKGDLLTVIDPRTYEARVRTDKAALAKLHADRRKAEAQLGL 135

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              +    E+ F+++             T   V    I S+   ++  L  + +   
Sbjct: 136 SRQQRARTERLFQAKATSQDSLDSAR--TTVLVDQAAIESIDAQIEQALAELDADQA 190



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 71/207 (34%), Gaps = 18/207 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            +   L+   R         R+     + + +      D  +      L +    +E   
Sbjct: 117 AALAKLHADRRKAEAQLGLSRQQRARTERLFQAKATSQDSLDSARTTVLVD-QAAIESID 175

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF---SSSNYAQQSQPLMKIVPHSKL 327
                 +++L   +   +   + + ++GTIV        + ++  Q +  LM+I      
Sbjct: 176 AQIEQALAELDADQADLDYTQVYATMSGTIVSIAVVEGQTLNSV-QSAPDLMRIA-DLDT 233

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++A+V    I  +K G      F        ++++  +  I+P     ++ +     Y
Sbjct: 234 MTVKAEVAEADITAIKPGMPGY--FTTLGGG-GRRWQGTVRLIEPTPVTDNDVVL----Y 286

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVL 414
            V++ +     ++ +  L     A+V 
Sbjct: 287 NVLMDV-----ANPDGALMTDMTAQVF 308


>gi|313890274|ref|ZP_07823908.1| chromosome segregation protein SMC [Streptococcus pseudoporcinus
           SPIN 20026]
 gi|313121379|gb|EFR44484.1| chromosome segregation protein SMC [Streptococcus pseudoporcinus
           SPIN 20026]
          Length = 1181

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 82/223 (36%), Gaps = 10/223 (4%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF--LNNKYDVLEKAFESREEQLL 139
             LL  E         L++   + L+     EK+ L+   L+ K D L++     +E L 
Sbjct: 689 QTLLQQEKAVAQLQTSLQEAENQLLKLKDLGEKTRLEEQELSFKADQLQERLADSQEILA 748

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           +          + F    + + + L++   R  ++      +++    +    ++  ++L
Sbjct: 749 NMTKMQSQNRERDFQTEKNDLEQELEVINQRKEALSQEIESIKSNKDTINQKKAALTEEL 808

Query: 200 T----MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN----ELYDEA 251
                  ++L  +    + DLN+ E+       ++ +      + +   +       +E 
Sbjct: 809 AQARLSQRDLANEKRFEETDLNRLEKERQTKEEKVTQLKDLLSSHISEEDIDRLPSLEEG 868

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            LE A    ++ + L   +    D  ++L  LE   +Q+   S
Sbjct: 869 LLEIAERKTQVEQKLVGLRFETEDYQAQLEELEVKLQQEQSKS 911



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/192 (9%), Positives = 70/192 (36%), Gaps = 6/192 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +   K  +  L+  ++  +  L   ++  ++LE   +  +E+      +  S  +++ 
Sbjct: 232 ADVRKDKQQLSQLQTSLEELQEGLAEYHHHRELLEAQNQKLKEKRQALNRETESKQAELL 291

Query: 154 N--YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                ++ + + + +           + +  ++ + L   +S+ +        L E+ AV
Sbjct: 292 ELTRALADLEKQIDLIKLETSQKNEKKAEASSQIAELETEISTLRIAEKQKVELLEQLAV 351

Query: 212 SQND----LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           S  +    L + +  + + + +  + I + +     + +     + +      EI +D +
Sbjct: 352 SSRENAKALEELQENLQRFSGDPDQLIEKLREDYLALMQKEASLSNQLTLLTSEIEKDNQ 411

Query: 268 QNQRTFADEMSK 279
           + +        +
Sbjct: 412 EQEHQLKAFSEQ 423


>gi|297300246|ref|XP_002805558.1| PREDICTED: plectin-1 isoform 3 [Macaca mulatta]
          Length = 4546

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2182 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2237

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2238 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2297

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2298 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2357

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2358 EETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2401



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 57/201 (28%), Gaps = 13/201 (6%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1343 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1402

Query: 151  KVFNYGISSVY--RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +     + +    RS++ +L               ++          ++++ +++     
Sbjct: 1403 RREEAAVDAQQQKRSIQEELQXXXXXXXXXXGQARQAEAAERSRLRIEEEIRVVR----- 1457

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                   L   ER    +  EL+      +       +  +EA         E  R   Q
Sbjct: 1458 -----LQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQ 1511

Query: 269  NQRTFADEMSKLTILEKTREQ 289
             +   A  +       + +++
Sbjct: 1512 AEAELALRVKAEAEAAREKQR 1532



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2231 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2290

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2291 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2350

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2351 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2410

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2411 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2441



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1639 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1698

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1699 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1755

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1756 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1807

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1808 LAEEAKRQRQLAEED 1822



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2319 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2378

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2379 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2436

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2437 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2476



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 54/203 (26%), Gaps = 6/203 (2%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  +   +  L        S       + + L +   + E + L  +        ++  
Sbjct: 1318 DLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1377

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  ++ +      + +    +  E  +   +    S Q++L               
Sbjct: 1378 AHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQXXXXXXXXXXGQAR 1437

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLEQ 268
                 ER   +   E+R    + +   R       E         E     ++   + E+
Sbjct: 1438 QAEAAERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAER 1497

Query: 269  NQRTFADEMSKLTILEKTREQKT 291
             +R   DE  +    E     + 
Sbjct: 1498 LRRQVQDESQRKRQAEAELALRV 1520



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1550 RLRQAEVERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1609

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1610 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1669

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1670 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1725

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1726 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1758



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1455 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1508

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1509 KRQAEAE--LALRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1566

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1567 ETAQRSA--EVELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1624

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1625 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1656



 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 68/213 (31%), Gaps = 16/213 (7%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E T L    ++++K      +  +   +    +   LE       EQ            +
Sbjct: 1843 EATRLKTEAEIALKEKEAENERLRRLAEDEAFQRRRLE-------EQAAQHKADIEERLA 1895

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYL---NRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            ++     S + R   +    +R         L L+       A  +  + +L  +++  E
Sbjct: 1896 QLRKASDSELERQKGLVEDTLRQRRQVEEEILALKASFEKAAAGKAELELELGRIRSNAE 1955

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR--- 264
                S+     +     +   E  +   E +  ++      +EA  +    L+E+ R   
Sbjct: 1956 DTLRSKEQAELEAARQRQLAAEEEQRRREAEERVQKSLAAEEEAARQRKAALEEVERLKA 2015

Query: 265  ---DLEQNQRTFADEMSKLTILEKTREQKTILS 294
               +  + +     E ++   L +   QK + +
Sbjct: 2016 KVEEARRLRERAEQESARQLQLAQEAAQKRLQA 2048


>gi|281178717|dbj|BAI55047.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|324007002|gb|EGB76221.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           57-2]
 gi|330911451|gb|EGH39961.1| putative membrane protein [Escherichia coli AA86]
          Length = 285

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 59  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 117

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 118 AEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 176

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 177 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 227

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 228 RAIYDQS 234



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 156


>gi|197105389|ref|YP_002130766.1| efflux system protein [Phenylobacterium zucineum HLK1]
 gi|196478809|gb|ACG78337.1| efflux system protein [Phenylobacterium zucineum HLK1]
          Length = 359

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 68/202 (33%), Gaps = 18/202 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           ++ +++ +  ++ R+   +Q        +L  +A  + A         + + Q       
Sbjct: 100 RKGQVLCRLAVDARQATLDQARANLRSRQLQLQAARQLAEKGYRSQTQVLETQAALDAAQ 159

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +++   E    Q  I +P AG +   +      Y    QP   ++  +    +   V   
Sbjct: 160 AQVRQTEIALSQVNIRAPFAG-VFDRRDAEIGTYLAPGQPCGTMIELN-PLLVVGHVPET 217

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
               ++ G  AT R      +  +     +  +      Q         Y + + + + A
Sbjct: 218 DATRLRVGAPATARL-----VDGRALSGRVRYVGQDADPQTRT------YPLEVAVQNPA 266

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
                 ++R+G  AE+   A +
Sbjct: 267 M-----DVRSGLSAELRIGAGS 283



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 35/99 (35%), Gaps = 1/99 (1%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V ++S  +G++ +     GS + +G  L           +D  + ++++ +  +   +
Sbjct: 76  RAVVVRSETAGVVAETPAREGSFVRKGQVLCRLAVDARQATLDQARANLRSRQLQLQAAR 135

Query: 115 SALDF-LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +    ++  VLE        Q      +   +   +
Sbjct: 136 QLAEKGYRSQTQVLETQAALDAAQAQVRQTEIALSQVNI 174


>gi|209543123|ref|YP_002275352.1| secretion protein HlyD family protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530800|gb|ACI50737.1| secretion protein HlyD family protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 344

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/282 (11%), Positives = 85/282 (30%), Gaps = 21/282 (7%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +     ++  ++    +       +  +    +   ++ S   A L   + D+T  + 
Sbjct: 71  LIAIRDDDYHARLAEKNATFHEAEAALEVVQRQIVLQTSQVSAADATLRMAEADVTQRRL 130

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
              +      D +   R +  +  +L      +      ++                +  
Sbjct: 131 ERRRQHDLITDGSTSHRDLEVADADLARLSAARDRDAALLDAARH--------MQDVLRA 182

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            LEQ +       +   +         I SP++G +     +    Y      + ++ P 
Sbjct: 183 RLEQARAAVEAARASRDLAAIDLGYTRITSPVSGQLTARMVY-VGEYVGIGTQVARVAPL 241

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD----NN 380
             +  + A     Q+ H++ G TA++    +       F+  ++ I P+   +      +
Sbjct: 242 PDVWIV-ANFREVQLTHMRVGQTASIAIDAFPGRT---FRGHVDSIGPVSGAETALLPPD 297

Query: 381 LQTQEYYEVILKITDLAFSDNNIE----LRNGFPAEVLFTAK 418
             T  +  ++ +       +   E    LR G  + V     
Sbjct: 298 NATGNFTHIVQRFPVKIVLEPGQESVRLLRPGMSSLVSVQTD 339



 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/135 (8%), Positives = 43/135 (31%), Gaps = 1/135 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V + +++  G  L+   D +    +  K  +       ++  +  +    ++ 
Sbjct: 52  GYVTEVPVADNARVSTGQTLIAIRDDDYHARLAEKNATFHEAEAALEVVQRQIVLQTSQV 111

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL-KMKLTRMRSIYLNRLDLEN 183
              +      E  +     +       + +   S     +    L R+ +       L +
Sbjct: 112 SAADATLRMAEADVTQRRLERRRQHDLITDGSTSHRDLEVADADLARLSAARDRDAALLD 171

Query: 184 KSSLLRALLSSHQKD 198
            +  ++ +L +  + 
Sbjct: 172 AARHMQDVLRARLEQ 186


>gi|167627233|ref|YP_001677733.1| membrane fusion protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667786|ref|ZP_04755364.1| membrane fusion protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876330|ref|ZP_05249040.1| membrane fusion protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|167597234|gb|ABZ87232.1| membrane fusion protein [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|254842351|gb|EET20765.1| membrane fusion protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 457

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 44/132 (33%), Gaps = 9/132 (6%)

Query: 54  DNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
                I+S        GI+ +   ++G ++ +G  L   +  +    ++    ++K  + 
Sbjct: 126 GEAQAIQSTEISSQSGGIVSEINFKSGQEVKKGDLLFKLDTSQLKASLEEALSNLKLAK- 184

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
                K   + L  +    +++ +      L  L +  +  S++    I + +       
Sbjct: 185 ---ITKDRYNKLVEQRATSKESADKANADYLSALAQVQNIESQIGFKEIRAPFDGKIGIR 241

Query: 169 TRMRSIYLNRLD 180
                 Y N  D
Sbjct: 242 NISLGQYFNNGD 253



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 75/205 (36%), Gaps = 25/205 (12%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           N  S  ++ + + +    T +L+ ++ E  + L  + ++  +   +            ++
Sbjct: 148 NFKSGQEVKKGDLLFKLDTSQLKASLEEALSNL-KLAKITKDRYNKLVEQRATSKESADK 206

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHS 325
               +   ++++  +E     K I +P  G I   ++ S   Y         L KI    
Sbjct: 207 ANADYLSALAQVQNIESQIGFKEIRAPFDGKI-GIRNISLGQYFNNGDNAATLTKI---- 261

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQ 384
              ++   V   ++  +  G    + F  Y+D    + F A I  I+  I+  + ++  Q
Sbjct: 262 DPIFVTFPVPQNKVSMISVGQ--EINF--YSDSYPGETFTAKITAINSFINDSNRSITVQ 317

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
             Y+           +++ ++  G 
Sbjct: 318 ATYQ-----------NSHHKIVPGM 331


>gi|197123085|ref|YP_002135036.1| secretion protein HlyD [Anaeromyxobacter sp. K]
 gi|196172934|gb|ACG73907.1| secretion protein HlyD family protein [Anaeromyxobacter sp. K]
          Length = 323

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 56/163 (34%), Gaps = 6/163 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V  G  + +G  L+T E  E    ID  K ++   R  +   +        + 
Sbjct: 44  GRVKALAVREGDPVKEGQELVTIESQEVAAKIDQVKAAVDAARARLQIAERGA--RAEER 101

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               +A ++   QL      +    + +    I+    +      + ++        + +
Sbjct: 102 QQARRALDTARSQLDVATKAHERATALLATGTITQ--AAFDEADFKFKAARDQLAVAQAR 159

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           + L+     +  +++  ++ L  +   S  ++    R   ++ 
Sbjct: 160 NDLVIKG--ARAEEVEALRALVRQGQGSLAEVESYGRETVQTA 200



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 84/298 (28%), Gaps = 29/298 (9%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR-----SI 174
           + +K     KA   RE   +    +  +  S+     I  V  ++     R++     + 
Sbjct: 38  VASKIPGRVKALAVREGDPVKEGQELVTIESQEVAAKIDQVKAAVDAARARLQIAERGAR 97

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              R          R+ L    K       L     ++Q   ++ +     +  +L    
Sbjct: 98  AEERQQARRALDTARSQLDVATKAHERATALLATGTITQAAFDEADFKFKAARDQLAVAQ 157

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                +++       EA          +   + Q Q + A+        E    +    +
Sbjct: 158 ARNDLVIKGARAEEVEA----------LRALVRQGQGSLAEV-------ESYGRETVQTA 200

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           PI G +           A    P++ +V  +    +   V    +  VK G    V  P 
Sbjct: 201 PIGGEVAKILVH-RGELAATGYPILTLVDRTDAWAVFP-VREDLLGAVKVGTDLDVEVPA 258

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQE-YYEVILKITDLAFSDNNIELRNGFPA 411
                       +  + P+          ++  +++            + ELR G  A
Sbjct: 259 LRRR----LPMTVFSVAPLGDFATWRATGEKGSFDLRTFEVKARPRQPDPELRPGMTA 312


>gi|154706910|ref|YP_001423475.1| macrolide-specific efflux protein [Coxiella burnetii Dugway
           5J108-111]
 gi|154356196|gb|ABS77658.1| macrolide-specific efflux protein [Coxiella burnetii Dugway
           5J108-111]
          Length = 391

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 33/285 (11%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           L     T +K+F    +SV  +  +     + +  +  D   K    +    +  K    
Sbjct: 64  LSPVDGTVTKLFFTYGASVEENQNIVEIHSQKLAEDYRDAVTKYLQAKDTYETSLKSFAG 123

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L+E   +S+ +  + ER  + + +               +N       LE      +
Sbjct: 124 TRALYEAGIISEEEF-RTERSQHDTNV---------------LNFYQARFTLEKVLREAD 167

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV----------YNQSFSSSNY 311
           I     +  R  AD  +   IL+K      + SP  G  +                    
Sbjct: 168 IDPKTVEGLR-IADINAVAQILQKHFRHILVKSPGKGVALFPVKSEDDKDGKGRLVVGTE 226

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +Q Q ++ I        I  +V+   I  +  G  ATV    +  I       I+  + 
Sbjct: 227 VKQGQLILSIG-DLSGFTITLQVSEININRLHSGLKATVTGDAFPGIT---LHGIVTAVA 282

Query: 372 PIIS-QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              + +Q         + + +++  +     N+ +  G  A V  
Sbjct: 283 RQSNPEQSEGDGALSTFNIEVQVPGVTKEQRNV-IHVGMSATVEI 326


>gi|90577277|ref|ZP_01233088.1| Putative Multidrug resistance efflux pump [Vibrio angustum S14]
 gi|90440363|gb|EAS65543.1| Putative Multidrug resistance efflux pump [Vibrio angustum S14]
          Length = 407

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 99/326 (30%), Gaps = 70/326 (21%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V   SQ+ +G  +   +       ++  + S+ +    +D  K  +D     Y
Sbjct: 75  GHVKAIHVTPNSQVKEGDLVYELDTEPYRIALNKAQASLASAEVALDIAKEDVDMAQASY 134

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +K  E  + QL+     Y                        +++   LNR   +NK
Sbjct: 135 HAADKDIEIAQNQLVAANEDY------------------------KLKQAMLNRYIKQNK 170

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                   +  Q  L   +   E              +     + L   I + K  +R  
Sbjct: 171 V----VQHTITQSKLDEQRTAVE--------------VAKSQKVMLASQIEKAKISVRKA 212

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               +++ L   +   ++                 +   +   +   + +P  G +    
Sbjct: 213 KLALEKSRLAVNSREVDVDTQ-----------HENVAKAQWDLDHTKVYAPADGYVTNFI 261

Query: 305 SFS---SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                   +      P M++  ++   Y+  +V  + I++VK G  A      +A     
Sbjct: 262 MREGQFVGSV-----PRMQM--YTDEKYVLMRVNHQAIRNVKVGQLAE-----FATAVYP 309

Query: 362 K--FKAIIEKIDPIISQQDNNLQTQE 385
              F A +E I     +   NL  +E
Sbjct: 310 GKVFTAEVEGIVEATGESQGNLIGRE 335


>gi|301024258|ref|ZP_07187952.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 69-1]
 gi|300396644|gb|EFJ80182.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 69-1]
          Length = 378

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++    EQK +L  ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSAAAEQKQILSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 47/152 (30%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSAAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             + ++   L  +L  H +  ++   L E   
Sbjct: 186 KQILSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|298246495|ref|ZP_06970301.1| secretion protein HlyD family protein [Ktedonobacter racemifer DSM
           44963]
 gi|297553976|gb|EFH87841.1| secretion protein HlyD family protein [Ktedonobacter racemifer DSM
           44963]
          Length = 217

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 62/181 (34%), Gaps = 9/181 (4%)

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI--LSPIAGT 299
             IN      +   A  L ++S      + T  + +  ++ L +T ++ T+   SPI GT
Sbjct: 38  AQINGQILNISSPQAGQLVDMSVKQGD-KVTSGETIGTISTLSQTGQKVTVNLTSPIDGT 96

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA-DI 358
           IV                L ++V       + A V   Q+ ++K G    +    Y  D 
Sbjct: 97  IVQESGV-VGQSVTPGASLAQVV-DLSKLNVVAYVDEGQLNNIKNGQDVDITVDAYNGDS 154

Query: 359 REKKFKAIIE-KIDPIISQQDNNLQTQEYYEV--ILKITDLAFSDNNIELRNGFPAEVLF 415
                  I++            ++ +  + +V   + +     +D    L  G  AEV  
Sbjct: 155 FTGHIDHIVQATAGQFSLLPSTDVSSGNFTKVGQRVPVVVTLDTDGGHNLVPGLSAEVKI 214

Query: 416 T 416
            
Sbjct: 215 H 215


>gi|297300250|ref|XP_002805560.1| PREDICTED: plectin-1 isoform 5 [Macaca mulatta]
          Length = 4514

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 7/224 (3%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            Q+ Q    L  +  ET    +L    ++ L+     E +      ++ +    +   + E
Sbjct: 2150 QVEQELTTLRLQLEETDHQKNLLDEELQRLKA----EATEAARQRSQVEEELFSVRVQME 2205

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +L     +  +    +      +  R L+ +  +M+ +      L   +     L    +
Sbjct: 2206 ELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAARLRQLAE 2265

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +DL   + L EK    +    Q+   +      L++     +   R + E  ++   + A
Sbjct: 2266 EDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLA 2325

Query: 257  NYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +   R L    Q Q   + E  +L +      +    +   
Sbjct: 2326 EETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEED 2369



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 57/201 (28%), Gaps = 13/201 (6%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               +   L +      R  +   ++AL+      +   +A    E +  +   +      
Sbjct: 1311 RMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVV 1370

Query: 151  KVFNYGISSVY--RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +     + +    RS++ +L               ++          ++++ +++     
Sbjct: 1371 RREEAAVDAQQQKRSIQEELQXXXXXXXXXXGQARQAEAAERSRLRIEEEIRVVR----- 1425

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                   L   ER    +  EL+      +       +  +EA         E  R   Q
Sbjct: 1426 -----LQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRK-RQ 1479

Query: 269  NQRTFADEMSKLTILEKTREQ 289
             +   A  +       + +++
Sbjct: 1480 AEAELALRVKAEAEAAREKQR 1500



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 66/211 (31%), Gaps = 14/211 (6%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFLGKYHS 147
             + ++   +  L+  I+ E  AL   +        + +  +    + E   L    +  +
Sbjct: 2199 SVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEEAEKMKQVAEEAARLSVAAQEAA 2258

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               ++    ++      +  L            L+ ++ LL+      Q+    ++   E
Sbjct: 2259 RLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKE 2318

Query: 208  KNAVSQ-------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + A              + ER          E +  +   +       +E    F    +
Sbjct: 2319 QMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRMAEMSRAQARAEEDAQRFRKQAE 2378

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            EI   L + +    ++++ +  LE  R+Q  
Sbjct: 2379 EIGEKLHRTELATQEKVTLVQTLEIQRQQSD 2409



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 59/195 (30%), Gaps = 12/195 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + LR  +  E+ A      + +  ++  E+  E       +  +   +          R 
Sbjct: 1607 EALRLRLQAEEVAQQKSLAQAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQ 1666

Query: 164  LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     + R +     + L  ++          +++L     L  + A +     + E  
Sbjct: 1667 LAEGTAQQRLAAEQELIRLRAETEQGEQQRQLLEEELA---RLQREAAAATQKRQELEAE 1723

Query: 223  VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
            + K   E+   +  +           +++                   R  A+E ++L  
Sbjct: 1724 LAKVRAEMEVLLASKARAEEESRSTSEKSKQRLEAEAGRF--------RELAEEAARLRA 1775

Query: 283  LEKTREQKTILSPIA 297
            L +  +++  L+   
Sbjct: 1776 LAEEAKRQRQLAEED 1790



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 3/160 (1%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 L+   +  +   +    +   L++  E   +QL +    +  T        +   
Sbjct: 2287 QEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMS 2346

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              + ++KL RM  +   +   E  +   R       + L   + L  +  V+     + +
Sbjct: 2347 AEAERLKL-RMAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTE-LATQEKVTLVQTLEIQ 2404

Query: 221  RIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYL 259
            R       E LRE I E +     + +      L+     
Sbjct: 2405 RQQSDHDAERLREAIAELEREKEKLQQEAKLLQLKSEEMQ 2444



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/203 (10%), Positives = 54/203 (26%), Gaps = 6/203 (2%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  +   +  L        S       + + L +   + E + L  +        ++  
Sbjct: 1286 DLRTRYSELTTLTSQYIKFISETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAE 1345

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                +  ++ +      + +    +  E  +   +    S Q++L               
Sbjct: 1346 AHAQAKAQAEREAKELQQRMQEEVVRREEAAVDAQQQKRSIQEELQXXXXXXXXXXGQAR 1405

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLEQ 268
                 ER   +   E+R    + +   R       E         E     ++   + E+
Sbjct: 1406 QAEAAERSRLRIEEEIRVVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAER 1465

Query: 269  NQRTFADEMSKLTILEKTREQKT 291
             +R   DE  +    E     + 
Sbjct: 1466 LRRQVQDESQRKRQAEAELALRV 1488



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E      ++       R      +S       K   LE++ +     +     + 
Sbjct: 1518 RLRQAEVERARQVQVALETAQRSAEVELQSKRASFAEKTAQLERSLQEEHVAVAQLREEA 1577

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +      +      +++  ++++    RL L+ +    +  L+  + +    +  
Sbjct: 1578 ERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKEEAE 1637

Query: 206  --------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                     E+ AV Q +L +QE    +   E       Q+ +      +   A  E   
Sbjct: 1638 REARRRGKAEEQAVRQRELAEQELEKQRQLAEG----TAQQRLAAEQELIRLRAETEQGE 1693

Query: 258  YLKE-ISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++ +  +L + QR  A    K   LE    +
Sbjct: 1694 QQRQLLEEELARLQREAAAATQKRQELEAELAK 1726



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 13/212 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            ++  +   T       +  ++ LR   +      +    K    E+A   R +   +   
Sbjct: 1423 VVRLQLEATERQRGGAEGELQALRARAE------EAEAQKRQAQEEAERLRRQVQDESQR 1476

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K  +         + +   + + K   ++++   RL  E     LR       + + +  
Sbjct: 1477 KRQAEAE--LALRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVAL 1534

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLK 260
               +++A  + +L  +     + T +L  ++ E+   +  +    E   +   E     +
Sbjct: 1535 ETAQRSA--EVELQSKRASFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERARE 1592

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  R+LE+ Q    + +      E+  +QK++
Sbjct: 1593 EAERELERWQLKANEALRLRLQAEEVAQQKSL 1624


>gi|294141632|ref|YP_003557610.1| HlyD family secretion protein [Shewanella violacea DSS12]
 gi|293328101|dbj|BAJ02832.1| HlyD family secretion protein [Shewanella violacea DSS12]
          Length = 349

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 65/209 (31%), Gaps = 8/209 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +K      +  + L   +     +  S     +     + +     NV  I +  SG++ 
Sbjct: 1   MKDKIYKYISYLILTVTVFFSVFLIVS-----DNIAPFTTQASVHKNVAIIAAEVSGLVT 55

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V+NG ++ +G  L + +       ++  +  +     +       L          +
Sbjct: 56  HISVDNGQRVNKGQLLFSIDQTSYRIAVNEAEAELHQAEENDSARWQELAITKQSRLQRQ 115

Query: 129 KAFESREEQLLDFLGKYHSTC--SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
              ++   +L  +     S     +  +    S   SL   +     +     +L  +  
Sbjct: 116 AEKDNFLHKLTRYQSLLKSGLITQEELDDIQLSYSISLSAVVAADAEVLRVSAELAQEKD 175

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                L+  + D    ++L   N VSQ D
Sbjct: 176 SAAIELARAKLDQK-KRDLVHTNIVSQVD 203



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 83/284 (29%), Gaps = 37/284 (13%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             S     +   ++     L        + +      +      +A   +    LT  ++
Sbjct: 71  LFSIDQTSYRIAVNEAEAELHQAEENDSARWQELAITKQSRLQRQAEKDNFLHKLTRYQS 130

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L +   ++Q +L+  +     S   +     E   +   + +  D A +E A        
Sbjct: 131 LLKSGLITQEELDDIQLSYSISLSAVVAADAEVLRVSAELAQEKDSAAIELA-------- 182

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        +KL   ++      I+S + G++   Q      Y       + +V +
Sbjct: 183 ------------RAKLDQKKRDLVHTNIVSQVDGSVSNLQL-EVGTYLSAGDIGLFLV-N 228

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHY----------ADIREKKFKAIIEKIDPII 374
               +I A    K + ++       + F                R     + +      +
Sbjct: 229 ESHAWINADFNEKGVNYLHTDAEVLLVFDALPGEIFRGNIINQDRAIYDASSVGSKLSDV 288

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +  D  ++ Q+     + I +L       +L +G  A V+    
Sbjct: 289 TNSDRWIREQQKIRTRIYIKELDP-----KLISGSRATVMVLNG 327


>gi|290512760|ref|ZP_06552126.1| HlyD family secretion protein [Klebsiella sp. 1_1_55]
 gi|289775101|gb|EFD83103.1| HlyD family secretion protein [Klebsiella sp. 1_1_55]
          Length = 355

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 7/207 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
                  L+ ++ ++    W +L P    +   SS+G I   +  V+I S  +G I    
Sbjct: 5   KKRWAGYLVGLLVVLAAAAWWLLRPPGLPDGFASSNGRIEATE--VDIASKIAGRIDTIL 62

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + QG  L   +     +        IK     +   ++ LD   ++    E   
Sbjct: 63  VKEGQFVRQGEVLARMDTRVLNEQRLEAAAQIKEAESAVLAARALLDQRQSEMRASEAVV 122

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           + R+ +L     ++    S   +   +   + L        S        + + S  RA 
Sbjct: 123 KQRQAELDSSAKRH--VRSNALSQRGAVSAQQLDDDRAAAESARAALESAKAQVSAARAA 180

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           + + +  +   +   E    ++  +  
Sbjct: 181 IEAARTSIIQAQTRVEAAQATERRILA 207


>gi|283787101|ref|YP_003366966.1| membrane fusion protein of a type I secretion system [Citrobacter
           rodentium ICC168]
 gi|282950555|emb|CBG90221.1| putative membrane fusion protein of a type I secretion system
           [Citrobacter rodentium ICC168]
          Length = 383

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 48/138 (34%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE  V  +G +     V  + +  +G ++K  V  G ++ +G  L   +       ++  
Sbjct: 46  IEKVVLVTGVLKPAVQV-NVGAQVNGQLRKLYVRQGDKVRKGQLLAEIDPTLQESDLNNA 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  + + R    + ++ L  L  + ++  +    R+   +    +            I+ 
Sbjct: 105 RAQLASARAQKLSAQATL--LRYRQELQRQRMMMRDGSGVRSDLEQAQAQYDAQVQQIAV 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
               +      +++   N
Sbjct: 163 SDAQIVQAEMAVKTAQAN 180



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/254 (11%), Positives = 86/254 (33%), Gaps = 12/254 (4%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           ++R +Y+ + D   K  LL  +  + Q+  + + N   + A ++      +  + +   E
Sbjct: 71  QLRKLYVRQGDKVRKGQLLAEIDPTLQE--SDLNNARAQLASARAQKLSAQATLLRYRQE 128

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L+     Q+ M+R  + +  +     A Y  ++ + +  +          +   +     
Sbjct: 129 LQR----QRMMMRDGSGVRSDLEQAQAQYDAQV-QQIAVSDAQIVQAEMAVKTAQANLSY 183

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
             I++PI G ++             SQ  P + ++ +     ++ +++   +Q ++ G  
Sbjct: 184 TRIVAPIDGEVLGI-VTREGQTIVSSQTAPTILVLANLDTMQVQTRISEADVQKIRPGQP 242

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ--TQEYYEVILKITDLAFSDNNIEL 405
                    + R       ++       +     +    +    +         + + +L
Sbjct: 243 LRFYVIANPEKRYSGTMGFVQPAPQEALEATGESRMGGNQQAMAVYYTGAFEVPNADRQL 302

Query: 406 RNGFPAEVLFTAKN 419
           +    A+V      
Sbjct: 303 KTSMTAQVFIQIAE 316


>gi|212691196|ref|ZP_03299324.1| hypothetical protein BACDOR_00687 [Bacteroides dorei DSM 17855]
 gi|237712354|ref|ZP_04542835.1| transmembrane protein possibly [Bacteroides sp. 9_1_42FAA]
 gi|212666428|gb|EEB27000.1| hypothetical protein BACDOR_00687 [Bacteroides dorei DSM 17855]
 gi|229453675|gb|EEO59396.1| transmembrane protein possibly [Bacteroides sp. 9_1_42FAA]
          Length = 355

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 7/81 (8%)

Query: 39  PIEISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
            I+  VS+  +  +     V   +        SG I K  V++G+++ +G  L   +  +
Sbjct: 33  KIDTIVSADKQTFLQFPGKVKAAQDISLAFRVSGTISKIHVKDGTRVQEGQLLAELDPTD 92

Query: 92  TTDLIDLKKVSIKNLRCHIDT 112
               +D  +   + ++   + 
Sbjct: 93  YQVQLDATEAEYQQIKAEAER 113


>gi|195119902|ref|XP_002004468.1| GI19951 [Drosophila mojavensis]
 gi|193909536|gb|EDW08403.1| GI19951 [Drosophila mojavensis]
          Length = 2411

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 62/179 (34%), Gaps = 4/179 (2%)

Query: 109  HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             ++  +            + +     EEQ  + + K      +          +  +   
Sbjct: 1228 ELERLEQLKPSQAADKQEVSEQATKLEEQQKEEMLKEEQRLKEEQRLKEEQRLKEEQRLK 1287

Query: 169  TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             + R     RL  E +   L+      ++ L   + L E+    +  L ++ R+  +  L
Sbjct: 1288 EQQRLKEEQRLKEEQR---LKEEQRLKEEQLKEEQRLKEEQLKEEQRLKEELRLKEEQRL 1344

Query: 229  ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +  + + E++ +      L +E  L+    LKE  R  E+ +      + +  + E+ R
Sbjct: 1345 KEEQRLKEEQRLKEE-QRLKEEQRLKDEERLKEEQRLKEEQRLKEEQRLKEEQLKEEQR 1402


>gi|161829722|ref|YP_001597633.1| ABC transporter, periplasmic substrate-binding protein [Coxiella
           burnetii RSA 331]
 gi|161761589|gb|ABX77231.1| ABC transporter, periplasmic substrate-binding protein [Coxiella
           burnetii RSA 331]
          Length = 391

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 33/285 (11%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           L     T +K+F    +SV  +  +     + +  +  D   K    +    +  K    
Sbjct: 64  LSPVDGTVTKLFFTYGASVEENQNIVEIHSQKLAEDYRDAVTKYLQAKDTYETSLKSFAG 123

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L+E   +S+ +  + ER  + + +               +N       LE      +
Sbjct: 124 TRALYEAGIISEEEF-RTERSQHDTNV---------------LNFYQARFTLEKVLREAD 167

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV----------YNQSFSSSNY 311
           I     +  R  AD  +   IL+K      + SP  G  +                    
Sbjct: 168 IDPKTVEGLR-IADINAVAQILQKHFRHILVKSPGKGVALFPVKSEDDKDGKGRLVVGTE 226

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +Q Q ++ I        I  +V+   I  +  G  ATV    +  I       I+  + 
Sbjct: 227 VKQGQLILSIG-DLSGFTITLQVSEININRLHSGLKATVTGDAFPGIT---LHGIVTAVA 282

Query: 372 PIIS-QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              + +Q         + + +++  +     N+ +  G  A V  
Sbjct: 283 RQSNPEQSEGDGALSTFNIEVQVPGVTKEQRNV-IHVGMSATVEI 326


>gi|163788448|ref|ZP_02182894.1| hypothetical protein FBALC1_08703 [Flavobacteriales bacterium
           ALC-1]
 gi|159876768|gb|EDP70826.1| hypothetical protein FBALC1_08703 [Flavobacteriales bacterium
           ALC-1]
          Length = 833

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/203 (11%), Positives = 68/203 (33%), Gaps = 1/203 (0%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             + K   +   +  +  E+ A +  + +     +A    + +  +   K   T +K+  
Sbjct: 344 DAEEKAKKVAEEQARLVAEQKAKEVADAEAKAKVEAERLAKIEAEEKAKKRAETRAKIEA 403

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              +      K KL   +       +     +  +A   +  +   + +   +  A +Q 
Sbjct: 404 NQKAKREAEAKAKLEAEQKAKAEAEEQAKLLAEQKAKEEADAQAKLLAEQKAKAEADAQA 463

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L  +++   ++  + +  + EQK       +    A  +        ++ L + +    
Sbjct: 464 KLLTEQKAKEEADTQAK-LLAEQKAKAEADAQAILLAEQKAKEEADAQAKLLAEQKAKTE 522

Query: 275 DEMSKLTILEKTREQKTILSPIA 297
            E     + E+  ++ +I +P  
Sbjct: 523 AEEQARLLAEQKAKEDSIANPKD 545



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 62/201 (30%), Gaps = 1/201 (0%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +   + + K   + +       E   L  +  +    ++A    + +      +     +
Sbjct: 356 QARLVAEQKAKEVADAEAKAKVEAERLAKIEAEEKAKKRAETRAKIEANQKAKREAEAKA 415

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K+     +      + KL   +             +  +A   +  +   + +   ++ A
Sbjct: 416 KLEAEQKAKAEAEEQAKLLAEQKAKEEADAQAKLLAEQKAKAEADAQAKLLTEQKAKEEA 475

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            +Q  L  +++   ++  +    + EQK       +    A  +     +E +R L + +
Sbjct: 476 DTQAKLLAEQKAKAEADAQ-AILLAEQKAKEEADAQAKLLAEQKAKTEAEEQARLLAEQK 534

Query: 271 RTFADEMSKLTILEKTREQKT 291
                  +    L K+ +   
Sbjct: 535 AKEDSIANPKDELGKSMKALE 555


>gi|148981246|ref|ZP_01816337.1| membrane-fusion protein [Vibrionales bacterium SWAT-3]
 gi|145960942|gb|EDK26269.1| membrane-fusion protein [Vibrionales bacterium SWAT-3]
          Length = 361

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  +    + +  L+ + +++ I +P  GT+   ++     Y Q       IV     
Sbjct: 135 EAEANYFSLSADIESLKASIDRREIRAPFDGTV-GIRNVYLGQYLQSGT---DIVRLEDT 190

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V+   I  +  G    +    Y +I    F+  I  I+P +S Q   +Q Q 
Sbjct: 191 SVMRLRFTVSQTDISRISVGQAVDIFVDAYPEI---PFEGSISAIEPAVSVQSGLIQVQ- 246

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +N+ +LR+G  A    
Sbjct: 247 ----------ADIPNNDGKLRSGMFARANI 266



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 43/135 (31%), Gaps = 5/135 (3%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G I     V  + +  SG+I +   E+G+++     L+  +       +   +  
Sbjct: 50  VIEAIGFIEPNQGV-TLANETSGVIDQISFESGTEVKSDQLLVRLDSDVEKANLKSSEAR 108

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   +      +     L  K  + ++A++  E           S  + +    I + + 
Sbjct: 109 LPAAKAKYKRYQG----LFKKGSISKEAYDEAEANYFSLSADIESLKASIDRREIRAPFD 164

Query: 163 SLKMKLTRMRSIYLN 177
                       YL 
Sbjct: 165 GTVGIRNVYLGQYLQ 179


>gi|88607877|ref|YP_504999.1| RND family efflux transporter MFP subunit [Anaplasma
           phagocytophilum HZ]
 gi|88598940|gb|ABD44410.1| efflux transporter, RND family, MFP subunit [Anaplasma
           phagocytophilum HZ]
          Length = 342

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 85/259 (32%), Gaps = 25/259 (9%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDL-NQQE 220
           SL   L    +++  +       +  RA+    + D  + + L     AV ++ +  + +
Sbjct: 31  SLIDVLEFDAAVHEVKRVFSANVAAARAVDIISEADGRVEEVLLSNGSAVDKDQVILRID 90

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  LE    + EQ+ + R ++E           +       L + +          
Sbjct: 91  ARGKLERLEQARVLLEQRRLERGVSESLGAEGYRSQVHDHAALVALREAEVN-------Y 143

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              +   +  T+ +P AG +         +     Q + +++ +     +   V  + + 
Sbjct: 144 KNAKLALDSATVKAPFAGIVDEIL-PQVGSMVSVGQTVARVL-NFDNLKVVTYVPERDVA 201

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
           ++K G +  V+               +  +  ++S +  +      Y++ + I       
Sbjct: 202 YIKPGDSVKVKL----GRTGVVSSGKVSFVSKVVSPETKS------YKLEIIIEPQGV-- 249

Query: 401 NNIELRNGFPAEVLFTAKN 419
              E+  G  A+V F  + 
Sbjct: 250 --FEITEGMFAQVEFVIRR 266



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 44/127 (34%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +     V+I S   G +++  + NGS + +   +L  +     + ++  +V ++  R   
Sbjct: 53  VAAARAVDIISEADGRVEEVLLSNGSAVDKDQVILRIDARGKLERLEQARVLLEQRRLER 112

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              +S              A  +  E  +++     +  S       + +   +  ++  
Sbjct: 113 GVSESLGAEGYRSQVHDHAALVALREAEVNYKNAKLALDSATVKAPFAGIVDEILPQVGS 172

Query: 171 MRSIYLN 177
           M S+   
Sbjct: 173 MVSVGQT 179


>gi|325286584|ref|YP_004262374.1| RND family efflux transporter MFP subunit [Cellulophaga lytica DSM
           7489]
 gi|324322038|gb|ADY29503.1| efflux transporter, RND family, MFP subunit [Cellulophaga lytica
           DSM 7489]
          Length = 388

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 71/211 (33%), Gaps = 9/211 (4%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           L   LT    ++ + L+L+      + +L   +   T+ +   ++       +N+ + + 
Sbjct: 72  LVSTLTTKNQVFNHFLELQGNVQTKQNVLIYPEMAGTLKRVYVKEG----QKVNKGQILA 127

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                 +   + + K     + +   E                 Q +  +  +++ +   
Sbjct: 128 TIDDGGMSSQLAQLK-TQAELAKTTYERQQRLWEQKIGSEIQYLQAKTNYEAQVNAIKQA 186

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQH 341
           E    + +I +P  G I  +                + +IV +    Y+  +V    I+ 
Sbjct: 187 ESQLGKSSIRAPFTGII-DDVIKEQGTVVAPGMGSEVFRIV-NLSNMYLDVEVPETYIKS 244

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +K G  A V FP   D    K +     I+P
Sbjct: 245 IKNGKEAVVYFPILNDSVVTKVRQTGNFINP 275



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 42/124 (33%), Gaps = 5/124 (4%)

Query: 50  ILNEDNVVEIKS----PF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +  + NV   ++    P  +G +K+  V+ G ++ +G  L T +D   +  +   K   +
Sbjct: 87  LELQGNVQTKQNVLIYPEMAGTLKRVYVKEGQKVNKGQILATIDDGGMSSQLAQLKTQAE 146

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +   + ++   +          +A  + E Q+                   + +   +
Sbjct: 147 LAKTTYERQQRLWEQKIGSEIQYLQAKTNYEAQVNAIKQAESQLGKSSIRAPFTGIIDDV 206

Query: 165 KMKL 168
             + 
Sbjct: 207 IKEQ 210


>gi|313498477|gb|ADR59843.1| Efflux transporter, RND family, MFP subunit [Pseudomonas putida
           BIRD-1]
          Length = 435

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 60/156 (38%), Gaps = 4/156 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +    N V ++S  +G + K   + G ++  G  L   +       +   + ++  
Sbjct: 83  ALGTVTA-TNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYRIALQQAEGTLAQ 141

Query: 106 LRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            +  +   +  L     L  +  + ++  ++ E Q+  F G   +  ++V +  ++  + 
Sbjct: 142 NQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVNDARLNLDFT 201

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            ++  ++    +    L     ++   AL+   Q +
Sbjct: 202 QIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTE 237


>gi|296450170|ref|ZP_06891931.1| probable lipoprotein [Clostridium difficile NAP08]
 gi|296878551|ref|ZP_06902556.1| probable lipoprotein [Clostridium difficile NAP07]
 gi|296260933|gb|EFH07767.1| probable lipoprotein [Clostridium difficile NAP08]
 gi|296430358|gb|EFH16200.1| probable lipoprotein [Clostridium difficile NAP07]
          Length = 415

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 109/355 (30%), Gaps = 92/355 (25%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V+ G  + +G  LL+    +        + S+K  +  +D  K++        
Sbjct: 75  GTVQEVYVKLGQNVRKGDELLSISSPD-------LENSVKQSKAALDLAKASYSSTTGG- 126

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                 SL+ ++ + ++   N       
Sbjct: 127 --------------------------------------SLEAQVNQAKTALDN------- 141

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +      Q++    K L+E+  +S +   + E  + +S  +L         +    
Sbjct: 142 ---AKIQYDESQRNYDNNKILYEQEVISLDQFKKIEFALEQSKQQLDSAQRSYDTVTSK- 197

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                              + L+Q Q +         +     ++ T+ +P+ GTI   +
Sbjct: 198 ---------SIPQAKALAKKQLDQAQVS-------YNLAMSNLDKLTLTAPVDGTITA-K 240

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +F +     QSQP   I+ +  +  +   V    I   KK     V           K  
Sbjct: 241 NFDAKEMITQSQP-AFIISNPNILEVNLNVAESDIDKFKKDGNVEVIIE--DQRILGKID 297

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +   +DP  S           Y + + +     ++ N + + G  A+V  + + 
Sbjct: 298 YVPSVVDPQTSL----------YPIKVLV-----NNTNNKFKAGMSAQVNLSVEK 337


>gi|293405144|ref|ZP_06649136.1| ydhJ protein [Escherichia coli FVEC1412]
 gi|298380791|ref|ZP_06990390.1| ydhJ protein [Escherichia coli FVEC1302]
 gi|331642238|ref|ZP_08343373.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli H736]
 gi|291427352|gb|EFF00379.1| ydhJ protein [Escherichia coli FVEC1412]
 gi|298278233|gb|EFI19747.1| ydhJ protein [Escherichia coli FVEC1302]
 gi|331039036|gb|EGI11256.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli H736]
          Length = 288

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 62  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 120

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 121 AEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 179

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 180 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 230

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 231 RAIYDQS 237



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 4   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 59

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 60  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 119

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 120 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 159


>gi|315500799|ref|YP_004089600.1| efflux transporter, RND family, MFP subunit [Asticcacaulis
           excentricus CB 48]
 gi|315418811|gb|ADU15449.1| efflux transporter, RND family, MFP subunit [Asticcacaulis
           excentricus CB 48]
          Length = 498

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 53/195 (27%), Gaps = 39/195 (20%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-------TILSPIAGTIVYN 303
           A  E+   +      LE   R     +     L    ++        TI +P+ G I   
Sbjct: 171 AQSEYLAVIATHDPSLEAAARQRLVLLGMSAGLIDNVKRTGKISNVVTITTPVGGAIQTL 230

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            +          Q L ++   S +    A V   Q   VK G T T     +       F
Sbjct: 231 DAR-QGMTVSMGQTLAQVTSLSSVWLTAA-VPEVQAGRVKIGQTVTADLAAFPSET---F 285

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF-------------- 409
              I  I P        L       V +++      +   +LR G               
Sbjct: 286 TGRIAAILPTTQTDSRTLS------VRVELP-----NPGAKLRPGMFATVHLAGNSSQAL 334

Query: 410 --PAEVLFTAKNTTL 422
             P E L      TL
Sbjct: 335 FVPTEALIRTGKRTL 349


>gi|253771576|ref|YP_003034407.1| secretion protein HlyD [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254163513|ref|YP_003046621.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli B str. REL606]
 gi|242379107|emb|CAQ33909.1| predicted membrane fusion protein (MFP) component of efflux pump,
           signal anchor [Escherichia coli BL21(DE3)]
 gi|253322620|gb|ACT27222.1| secretion protein HlyD family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975414|gb|ACT41085.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli B str. REL606]
 gi|253979570|gb|ACT45240.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli BL21(DE3)]
          Length = 378

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|192291363|ref|YP_001991968.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           TIE-1]
 gi|192285112|gb|ACF01493.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 300

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 76/231 (32%), Gaps = 24/231 (10%)

Query: 204 NLFEKNAVSQNDLN---QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----- 255
            + +   V + D+      ER+     L   +   + ++ML        +  L+      
Sbjct: 62  PIADNQYVKRGDVLYEIDSERLRLAVVLAEADVEAKYQDMLVQQATAQRKQQLKLKDVVS 121

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L++ S         +   ++   + +    +  I SP+ G +   +     +YA   
Sbjct: 122 QEALQQSSGAAAMASAAYQAALATRDLAKLNLARSVIRSPVDGYVTNLKLR-PGDYATAG 180

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID---- 371
              + I+      +I       ++Q ++ G  A V+   +        ++I   I+    
Sbjct: 181 MTNVAIL-DGASFWITGYFEETKLQQIRVGAPARVKLMGFDQPAAGHVESIGRGIENSNE 239

Query: 372 -------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                  P ++   + ++  +   V + +  +      +EL  G  A V  
Sbjct: 240 TPGRFGLPNVAATFSWVRLAQRIPVRIHLDRV---PAGVELAAGMTATVEI 287


>gi|148269704|ref|YP_001244164.1| RND family efflux transporter MFP subunit [Thermotoga petrophila
           RKU-1]
 gi|147735248|gb|ABQ46588.1| efflux transporter, RND family, MFP subunit [Thermotoga petrophila
           RKU-1]
          Length = 335

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 47/143 (32%), Gaps = 16/143 (11%)

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L   ++  E  T++SP+ G +         +       ++ IV  +    +   ++   +
Sbjct: 125 LEKAKENLENTTVVSPVNGVVQSVNVD-VGDRVSVGTSIVTIV-ETDTLRVEGSISEYDL 182

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           ++VK+G  A   F              +++I P+               V +   + +F 
Sbjct: 183 KNVKEGMKAVFTFEQLGLT----LTGKVKRISPVAETSGG---------VTVIPVEFSFD 229

Query: 400 DNNIEL-RNGFPAEVLFTAKNTT 421
                L   G   +V    K  T
Sbjct: 230 QIPPSLVIPGLTCDVEIIIKEAT 252



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
            +V   G++  +    ++ S  SG + +  VE G  +  G  +   +D +  
Sbjct: 54  ETVEIVGQVTADT--KKVTSKVSGDVLEIYVEEGDVVQVGQKIAKIDDTDYQ 103


>gi|50119747|ref|YP_048914.1| hypothetical protein ECA0802 [Pectobacterium atrosepticum SCRI1043]
 gi|49610273|emb|CAG73716.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
          Length = 451

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 57/148 (38%), Gaps = 7/148 (4%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +      P + +R+ L + I ++ ++    L+P+  SV +  EI+    V  +++P +G+
Sbjct: 173 RRRPSKTPPARRRLILAAAIALVLIL----LIPVRQSVLAPAEIVAHRPV-MVRAPVAGV 227

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V     +    PL+  +  E  + ++  + S           +    F  N    
Sbjct: 228 VDDILVRPNQTVSANQPLVRLDVRELENRLESARQSFATADAQYRQAQQQALFDANSKAS 287

Query: 127 LEKAFESREEQL--LDFLGKYHSTCSKV 152
           L      RE+    +DFL +       V
Sbjct: 288 LAVLQSRREQAQSDMDFLQRQQERMQLV 315



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 74/209 (35%), Gaps = 18/209 (8%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD--LEQNQRTFADEMSKLTILE 284
            L++RE  +  ++  +       +        L + +    L   Q       S +  L+
Sbjct: 247 RLDVRELENRLESARQSFATADAQYRQAQQQALFDANSKASLAVLQSRREQAQSDMDFLQ 306

Query: 285 KTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHV 342
           + +E+  ++SP  G  I+ + S          + +M I  PH     I  ++       +
Sbjct: 307 RQQERMQLVSPRDGVAILDDASDWIGRSVAVGERIMMIADPHDVELEI--QLPAADAIAL 364

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           + G  A VR            +A +E+I    +   +N+     Y +  +     F+ ++
Sbjct: 365 ENG--ADVRL-FLNVAPNSAQEARLEQIGYRAAPTPDNVMA---YRLRAR-----FTQDD 413

Query: 403 IELRNGFPAEVLFTAKNTTLAQEII-HPI 430
             LR G         K T L   ++  P+
Sbjct: 414 PLLRVGLKGTAKLYGKRTVLFVYLLRKPL 442


>gi|113476522|ref|YP_722583.1| FkbM family methyltransferase [Trichodesmium erythraeum IMS101]
 gi|110167570|gb|ABG52110.1| methyltransferase FkbM family [Trichodesmium erythraeum IMS101]
          Length = 786

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 74/203 (36%), Gaps = 14/203 (6%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +     + + +  ++  ++ L+ +  + D +    E    QL     + +   +K   
Sbjct: 501 QTNELSQKLVSTQSQLEQNQTELETIQYQRDQILGELEKFHCQL-----QQNQEKAKNAE 555

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +      L+   ++   I       +++    +    + + +L   +   E     ++
Sbjct: 556 SELQKTREKLENTQSQRDEISQQLTSTQSQLQQNQEKAKNAESELQKTREKLENTQSQRD 615

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANYLKEISRDLEQ 268
           +++QQ   +  +  +L++N  + KN    + +  ++         E +  L      L+Q
Sbjct: 616 EISQQ---LTSTQSQLQQNQEKAKNAESELQKTREKLENTQSQRDEISQQLTSTQSQLQQ 672

Query: 269 NQRTFADEMSKLTILEKTREQKT 291
           NQ    +  S+L  ++   ++  
Sbjct: 673 NQEKAKNAESELQNIKTELDKSH 695



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 71/209 (33%), Gaps = 16/209 (7%)

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
           P+    DI+      L +   + ++  +   ++ L+    + + L +   S + QL    
Sbjct: 461 PVFRDIDIDEVGKSVLSEAQFRQIQSQLQQTQTNLENSQYQTNELSQKLVSTQSQL---- 516

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            + + T  +   Y    +   L+    +++       + E++    R  L + Q     +
Sbjct: 517 -EQNQTELETIQYQRDQILGELEKFHCQLQQNQEKAKNAESELQKTREKLENTQSQRDEI 575

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
                    +Q+ L Q +     +  EL++   + +N              E +  L   
Sbjct: 576 SQQLTS---TQSQLQQNQEKAKNAESELQKTREKLENTQSQ--------RDEISQQLTST 624

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKT 291
              L+QNQ    +  S+L    +  E   
Sbjct: 625 QSQLQQNQEKAKNAESELQKTREKLENTQ 653


>gi|262374359|ref|ZP_06067634.1| heavy metal RND efflux membrane fusion protein CzcB family protein
           [Acinetobacter junii SH205]
 gi|262310616|gb|EEY91705.1| heavy metal RND efflux membrane fusion protein CzcB family protein
           [Acinetobacter junii SH205]
          Length = 499

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 24/171 (14%)

Query: 252 NLEFANYLKEISRDLEQNQRTFADEM-------SKLTILEKTREQKTILSPIAGTIVYNQ 304
             EF   L+   R L Q  R     +        ++    + +   T+ +PI+G I   +
Sbjct: 173 QTEFLAVLRTGDRSLIQASRQRLQLLGIPQNVIHQVERTHRVQSNITLQAPISGFIDSLE 232

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q L  I   +   ++ A V  KQI  +K+G +    F  ++     K  
Sbjct: 233 VRN-GMALAMGQTLATIKGIN-PIWLEAAVPEKQIAGIKRGMSVEANFAAFSQ----KVT 286

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  I P +      +      +V +++++ +      +L+ G  A V  
Sbjct: 287 GKVIDILPTLDTTSRTI------KVRIELSNPS-----GQLKPGMFASVNI 326


>gi|301113282|ref|XP_002998411.1| myosin-like protein [Phytophthora infestans T30-4]
 gi|262111712|gb|EEY69764.1| myosin-like protein [Phytophthora infestans T30-4]
          Length = 1483

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 65/195 (33%), Gaps = 5/195 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E   L + +K     +R     EK+           L +    R  + +    +      
Sbjct: 1084 EKKRLAEERKRKAIAMRLR--REKAVTAVQRLVRGHLGRKQVERMREEMRQKQEQARREE 1141

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +          R  +   TR++SI   RL    + S +R   +    ++   +N  E+ A
Sbjct: 1142 EEMRRRAEEERREEEAAATRLQSIQRGRL-TRQQFSKIRIEKAERDDEIARARNEQEEEA 1200

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                   +QE  + ++  E  E I + +     I     E   E A   +E   ++ + +
Sbjct: 1201 ARARK--EQEEEIARARREQEEEIAQARREQEEIARARQEQEEEIARARQERDDEIARVR 1258

Query: 271  RTFADEMSKLTILEK 285
                    +L  L+K
Sbjct: 1259 DENRRLKQQLAELQK 1273



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 56/191 (29%), Gaps = 11/191 (5%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              +++++    T +        K +  ++   +R EQ  +          ++        
Sbjct: 1160 TRLQSIQRGRLTRQQFSKIRIEKAERDDEIARARNEQEEEAARARKEQEEEIARARREQ- 1218

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
               +         I   R + E + +  R        ++  +++           L QQ 
Sbjct: 1219 EEEIAQARREQEEIARARQEQEEEIARARQERD---DEIARVRD-------ENRRLKQQL 1268

Query: 221  RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
              + K+  EL   + E +     +        +E    L    +++E  +  ++     L
Sbjct: 1269 AELQKANSELEAVVAEYRCERDVVKASNSLKEVELTQKLNVRRKEVETARGEYSTICDFL 1328

Query: 281  TILEKTREQKT 291
                 +R    
Sbjct: 1329 EKTGSSRRATE 1339


>gi|225875030|ref|YP_002756489.1| heavy metal efflux RND transporter, MFP subunit CusB
           [Acidobacterium capsulatum ATCC 51196]
 gi|225793811|gb|ACO33901.1| heavy metal efflux RND transporter, MFP subunit CusB
           [Acidobacterium capsulatum ATCC 51196]
          Length = 524

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 58/180 (32%), Gaps = 16/180 (8%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            K   + +         +   +L + +    +      +E+++L    + + +  + +P 
Sbjct: 159 AKQNQKSLRPGGKGTASQEGTWLLDAAEQRLRQFDVPQNEITELIQSGRVQREIPVDAPA 218

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +G I    +   + Y Q    L  I       ++ A V    +  ++ G  A V    Y 
Sbjct: 219 SGYITDRNAL-PNAYVQPDTKLYTIA-DLSTVWVYANVFQTDVGELRPGDPAQVTVDAYP 276

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 F   I++I P +                +++    F +  + L+ G    V   
Sbjct: 277 GRT---FYGRIDQILPDVDPVTRT--------ARVRL---VFRNPGVVLKPGMYVNVDIK 322


>gi|153831778|ref|ZP_01984445.1| multidrug resistance efflux pump [Vibrio harveyi HY01]
 gi|148872288|gb|EDL71105.1| multidrug resistance efflux pump [Vibrio harveyi HY01]
          Length = 376

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 69/232 (29%), Gaps = 23/232 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   +  +   +K        +  +  + E       A     Q++    +  F++ A +
Sbjct: 99  FQAEVDKLRAKVKEASQGALGLESSVQEAEAAVIKALAERDKAQREFDRYQRGFDRGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L+ + +    +   L   + + K     I                 +  ++      
Sbjct: 159 EQQLDTRRQAFKAAQAALE--VAQSKQEQAQIA----------------LDSEVGGENTQ 200

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
            A  +++L   E   EQ  + +P  G +                 P+M  V      Y  
Sbjct: 201 VASLLAELRKAEFNLEQTVVTAPTDGYVTQLALRPGVMAVPLPLAPVMTFVHTEDKLYTA 260

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           A      +Q ++ G+ A   F        K FK  +  + P I +     + 
Sbjct: 261 A-FRQNSLQRLEPGFEAEFMFRALP---GKVFKGQVVDVLPAIGESQFQARG 308



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 49/147 (33%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G + +  V+    + +G  L   + I     +D  +  +K        L   +   ++A+
Sbjct: 72  GRVIEVPVQPNQPLQKGDVLFRIDPIPFQAEVDKLRAKVKEASQGALGLESSVQEAEAAV 131

Query: 118 DFLNNKYDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                + D  ++ F+  +       F  +   T  + F    +++  +   +     ++ 
Sbjct: 132 IKALAERDKAQREFDRYQRGFDRGAFTEQQLDTRRQAFKAAQAALEVAQSKQEQAQIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                   + + L A L   + +L   
Sbjct: 192 SEVGGENTQVASLLAELRKAEFNLEQT 218


>gi|126663770|ref|ZP_01734766.1| possible membrane-fusion protein [Flavobacteria bacterium BAL38]
 gi|126624353|gb|EAZ95045.1| possible membrane-fusion protein [Flavobacteria bacterium BAL38]
          Length = 369

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 77/208 (37%), Gaps = 25/208 (12%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            + K  +E+ E I+  K+       L+ E      NYLK    D  Q +  +     KL 
Sbjct: 109 DLQKDYVEVAEQINYLKSEFERQKTLFTEKITSQKNYLK-AESDYRQAKGMYQGLREKLL 167

Query: 282 ILEKT---------REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           +L              Q TI +PI+G +    +     +   S  +++IV  +   ++  
Sbjct: 168 LLHINPANVEKGIFTSQITITAPISGDVTVMNAN-VGMFMSPSDVILEIV-DTNYLHLNL 225

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            +  K I +VK+G   + +     +   + F + ++ +   I  +D           I  
Sbjct: 226 SIFEKDILNVKQGQKISFKVT---EASNEVFSSTVQMVGKSIENKDRT---------IAV 273

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           I DL  +  + +L +G   E      + 
Sbjct: 274 IGDLTSAIKS-KLLSGMFVEAFIITTSK 300



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 48/103 (46%), Gaps = 9/103 (8%)

Query: 41  EISVSSSGEI-LNEDNVVEIKSPFSGIIK--KFQVENGSQILQGTPLLTFEDIETTDLID 97
           +++V +SG+I +      ++ +   G +K  K  V  G ++ +G  L+T E+ +  DL  
Sbjct: 55  DVTVKTSGKIDVPPQYRAKVTTFLGGYVKATKLLV--GDKVTKGQALITLENTDYLDLQK 112

Query: 98  ---LKKVSIKNLRCHIDTEKSAL-DFLNNKYDVLEKAFESREE 136
                   I  L+   + +K+   + + ++ + L+   + R+ 
Sbjct: 113 DYVEVAEQINYLKSEFERQKTLFTEKITSQKNYLKAESDYRQA 155


>gi|78777076|ref|YP_393391.1| secretion protein HlyD [Sulfurimonas denitrificans DSM 1251]
 gi|78497616|gb|ABB44156.1| Secretion protein HlyD [Sulfurimonas denitrificans DSM 1251]
          Length = 263

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +IL      ++ SG ++  DN   I S F G +   +V  G  + +G  L T +  E   
Sbjct: 13  AILA--AEGITLSGTVI-SDNRKMITSRFMGFVTDVKVSEGDSVKKGDLLYTIDSKEIDS 69

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   ++ I   +  +   ++    +    D   +  E       D + K+      +  
Sbjct: 70  ALIQVELGISQAQLSLQMYQNQYTNVKLNLDRHRRLLEK------DMVSKFEVENLALAE 123

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             ++++   + +   ++        +++N+   L
Sbjct: 124 QNLANM---IIIAKKQVIQAEAQLAEVKNQYRYL 154



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 78/247 (31%), Gaps = 53/247 (21%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           + +  + L     +    + +   ++ + +L   + L EK+ VS+ ++            
Sbjct: 69  SALIQVELGISQAQLSLQMYQNQYTNVKLNLDRHRRLLEKDMVSKFEV------------ 116

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                            E    A    AN +    + + Q +   A+  ++   L     
Sbjct: 117 -----------------ENLALAEQNLANMIIIAKKQVIQAEAQLAEVKNQYRYL----- 154

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              I +P  G IV          A    P +++   S    I A+++   ++ +++G   
Sbjct: 155 --NITAPNNGVIVSKNI-KVGEMAMPGMPALELSDLSD-LKISAEISEDNLKLIQEGKKV 210

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            V              AII           +N  T  +    +KI+   F +    +  G
Sbjct: 211 VVNIASQNIQTVGVVSAII---------PSSNPMTHSF---KIKIS---FKNVYNSIYPG 255

Query: 409 FPAEVLF 415
             A V+ 
Sbjct: 256 MYATVVI 262


>gi|312881516|ref|ZP_07741302.1| efflux transporter, RND family, MFP subunit [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309370793|gb|EFP98259.1| efflux transporter, RND family, MFP subunit [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 388

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 72/215 (33%), Gaps = 21/215 (9%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           F+   + +      +    ++  EL +           +N +      +  +   +   +
Sbjct: 72  FQDGDMVKKGQLIAQLDDTQAVAELDKAKSSMGLAESKLNRVLALLKKQPDSMSAQDVEE 131

Query: 266 LEQNQRTF-ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           L Q      AD   K ++++  +    I++P  G  + N + S  +  + + PL+ +V  
Sbjct: 132 LRQKLNLAKADFRQKESLIQDYK----IVAPFDGQ-LTNFTQSVGSRVEAATPLVSLVKL 186

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                +   ++  +    K G   ++    Y +     F   ++ + P + +        
Sbjct: 187 D-PLQVHYSISQSEYGQAKLGQFVSITVDAYPNQ---SFTGKLDYLAPRVDESSG----- 237

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 +++      + +  L  G  A+VL     
Sbjct: 238 -----RVEV-HAHIDNPDKRLVPGMFAKVLQKTGQ 266



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 44/125 (35%), Gaps = 5/125 (4%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K    ++G  + +G  +   +D +    +D  K S+      ++   + L        +
Sbjct: 67  LKALHFQDGDMVKKGQLIAQLDDTQAVAELDKAKSSMGLAESKLNRVLALLK--KQPDSM 124

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             +  E   ++L      +    S + +Y I + +     +LT       +R++      
Sbjct: 125 SAQDVEELRQKLNLAKADFRQKESLIQDYKIVAPF---DGQLTNFTQSVGSRVEAATPLV 181

Query: 187 LLRAL 191
            L  L
Sbjct: 182 SLVKL 186


>gi|284923500|emb|CBG36595.1| putative type I secretion system, inner membrane protein
           [Escherichia coli 042]
          Length = 355

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 74/201 (36%), Gaps = 7/201 (3%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDLNQ 218
           ++  ++   E    ++  +  
Sbjct: 187 NIIQVQTRVEAAQATERRIAA 207


>gi|265752064|ref|ZP_06087857.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263236856|gb|EEZ22326.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 355

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 7/81 (8%)

Query: 39  PIEISVSSSGE--ILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIE 91
            I+  VS+  +  +     V   +        SG I K  V++G+++ +G  L   +  +
Sbjct: 33  KIDTIVSADKQTFLQFPGKVKAAQDISLAFRVSGTISKIHVKDGTRVQEGQLLAELDPTD 92

Query: 92  TTDLIDLKKVSIKNLRCHIDT 112
               +D  +   + ++   + 
Sbjct: 93  YQVQLDATEAEYQQIKAEAER 113


>gi|124514878|gb|EAY56389.1| putative secretion protein (HlyD) [Leptospirillum rubarum]
          Length = 299

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 67/217 (30%), Gaps = 23/217 (10%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L+     +      +RE+ H+ +   R +      A  +   +      D    Q+ 
Sbjct: 85  RIALSSARASLLARYAAMRESDHDARRYERLLLSGNASAE-KAEAFRARALEDRALYQKA 143

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            +D    L+  +   E+  + S + GT+         +Y ++ Q +  +V  S   Y+  
Sbjct: 144 LSD----LSRAQLDLERSVVRSKVNGTVTNMHL-KPGDYVRRGQGVFALV-DSDSYYVDG 197

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV--- 389
                +I  ++ G    +R               +E I   I  Q+   +      V   
Sbjct: 198 YFEETKIPSIRPGDRMEIRL----MGVSPPLWGTVETISRAIYDQERQDRPGTVPRVNPT 253

Query: 390 --------ILKIT-DLAFSDNNIELRNGFPAEVLFTA 417
                    + +   L      + L  G  A V+   
Sbjct: 254 FSWVRLAQRIPVRIRLESVPAGVLLVAGQTATVIDRT 290



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 51/159 (32%), Gaps = 17/159 (10%)

Query: 20  MTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +T++ +  + G + W     +     +  V +   +    +V        G++ +  V +
Sbjct: 16  LTIVVLAILAGYLLWHIDRTAPWTR-DGRVRAD-WVSVSPDVE-------GLVSEVNVRD 66

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAF 131
              + +G  L   +       +   + S+      +   D +    + L    +   +  
Sbjct: 67  NQIVRRGDVLFRIDPKRFRIALSSARASLLARYAAMRESDHDARRYERLLLSGNASAEKA 126

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           E+   + L+    Y    S +    +      ++ K+  
Sbjct: 127 EAFRARALEDRALYQKALSDLSRAQLDLERSVVRSKVNG 165


>gi|114331743|ref|YP_747965.1| RND family efflux transporter MFP subunit [Nitrosomonas eutropha
           C91]
 gi|114308757|gb|ABI60000.1| efflux transporter, RND family, MFP subunit [Nitrosomonas eutropha
           C91]
          Length = 387

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 60/200 (30%), Gaps = 16/200 (8%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L      V      +R      ++++        E+  + +N     ++D          
Sbjct: 126 LRANSLAVLAERAAIRARQLFAEDVISAAELQRRESESQVSNAELSAAKDQLLLLGVNNQ 185

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            +  LT   +      I +P +GT++     +     Q S  L   V      ++   V 
Sbjct: 186 AIQDLTRHGQILPSVVITAPRSGTVIARNV-AVGQVVQPSDQLFT-VADLSELWVVGDVP 243

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
                 V++G    VR P   D     F   I  +  I++     +       V  ++ +
Sbjct: 244 EYAAHFVEQGQHVEVRVPALGDAN---FDGTIIFVSDIVNPLTRTVT------VRTEVDN 294

Query: 396 LAFSDNNIELRNGFPAEVLF 415
                   +L+    A V  
Sbjct: 295 PER-----KLKPDMLATVHI 309



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 14/141 (9%)

Query: 36  ILLPIEISVSSSGEILN-EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
            L  I   +   G+I   E  +V++ + F+G I +     G  +  G  L          
Sbjct: 61  FLADISEKLHVPGQIKVNETKLVQVGASFTGRIVEVYAHLGDSVAAGAKLARI------T 114

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +L +  +  LR +     +    +  +    E    + E Q          + S+V N
Sbjct: 115 SPELVQAQLAYLRANSLAVLAERAAIRARQLFAEDVISAAELQ-------RRESESQVSN 167

Query: 155 YGISSVYRSLKMKLTRMRSIY 175
             +S+    L +     ++I 
Sbjct: 168 AELSAAKDQLLLLGVNNQAIQ 188


>gi|89108486|ref|AP_002266.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli str. K-12
           substr. W3110]
 gi|90111311|ref|NP_416161.4| predicted membrane fusion protein (MFP) of YdhJK efflux pump
           [Escherichia coli str. K-12 substr. MG1655]
 gi|157161107|ref|YP_001458425.1| MFP family transporter [Escherichia coli HS]
 gi|170020004|ref|YP_001724958.1| secretion protein HlyD family protein [Escherichia coli ATCC 8739]
 gi|170081307|ref|YP_001730627.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli str. K-12
           substr. DH10B]
 gi|188491740|ref|ZP_02999010.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 53638]
 gi|218699787|ref|YP_002407416.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli IAI39]
 gi|218705145|ref|YP_002412664.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli UMN026]
 gi|238900860|ref|YP_002926656.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli BW2952]
 gi|256022693|ref|ZP_05436558.1| undecaprenyl pyrophosphate phosphatase [Escherichia sp. 4_1_40B]
 gi|300901546|ref|ZP_07119617.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           198-1]
 gi|300939037|ref|ZP_07153732.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           21-1]
 gi|300951228|ref|ZP_07165082.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           116-1]
 gi|300958518|ref|ZP_07170652.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           175-1]
 gi|301026803|ref|ZP_07190206.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           69-1]
 gi|301027682|ref|ZP_07190997.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           196-1]
 gi|301647823|ref|ZP_07247608.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           146-1]
 gi|307138300|ref|ZP_07497656.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli H736]
 gi|312969665|ref|ZP_07783848.1| uncharacterized protein ydhJ [Escherichia coli 1827-70]
 gi|331663119|ref|ZP_08364029.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli TA143]
 gi|14917088|sp|P76185|YDHJ_ECOLI RecName: Full=Uncharacterized protein ydhJ
 gi|85675055|dbj|BAA15404.2| undecaprenyl pyrophosphate phosphatase [Escherichia coli str. K12
           substr. W3110]
 gi|87081951|gb|AAC74716.2| predicted membrane fusion protein (MFP) of YdhJK efflux pump
           [Escherichia coli str. K-12 substr. MG1655]
 gi|157066787|gb|ABV06042.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli HS]
 gi|169754932|gb|ACA77631.1| secretion protein HlyD family protein [Escherichia coli ATCC 8739]
 gi|169889142|gb|ACB02849.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli str. K-12
           substr. DH10B]
 gi|188486939|gb|EDU62042.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 53638]
 gi|218369773|emb|CAR17544.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli IAI39]
 gi|218432242|emb|CAR13132.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli UMN026]
 gi|238863759|gb|ACR65757.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli BW2952]
 gi|260449231|gb|ACX39653.1| secretion protein HlyD family protein [Escherichia coli DH1]
 gi|299879200|gb|EFI87411.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           196-1]
 gi|300314818|gb|EFJ64602.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           175-1]
 gi|300355076|gb|EFJ70946.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           198-1]
 gi|300395306|gb|EFJ78844.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           69-1]
 gi|300449502|gb|EFK13122.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           116-1]
 gi|300456065|gb|EFK19558.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           21-1]
 gi|301074051|gb|EFK88857.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           146-1]
 gi|309701871|emb|CBJ01183.1| HlyD-family secretion protein [Escherichia coli ETEC H10407]
 gi|310337950|gb|EFQ03039.1| uncharacterized protein ydhJ [Escherichia coli 1827-70]
 gi|315136285|dbj|BAJ43444.1| YdhJ protein [Escherichia coli DH1]
 gi|315618834|gb|EFU99417.1| uncharacterized protein ydhJ [Escherichia coli 3431]
 gi|323937250|gb|EGB33529.1| HlyD family protein secretion protein [Escherichia coli E1520]
 gi|323940687|gb|EGB36878.1| HlyD family protein secretion protein [Escherichia coli E482]
 gi|323968412|gb|EGB63818.1| HlyD family protein secretion protein [Escherichia coli M863]
 gi|323978216|gb|EGB73302.1| HlyD family protein secretion protein [Escherichia coli TW10509]
 gi|327252761|gb|EGE64415.1| hypothetical protein ECSTEC7V_2004 [Escherichia coli STEC_7v]
 gi|331058918|gb|EGI30895.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli TA143]
          Length = 285

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 59  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 117

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 118 AEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 176

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 177 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 227

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 228 RAIYDQS 234



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 156


>gi|320355099|ref|YP_004196438.1| RND family efflux transporter MFP subunit [Desulfobulbus
           propionicus DSM 2032]
 gi|320123601|gb|ADW19147.1| efflux transporter, RND family, MFP subunit [Desulfobulbus
           propionicus DSM 2032]
          Length = 378

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 21/206 (10%)

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD------LEQNQRTFADE 276
           V    L ++++I  +   LR        A +      K ++         +  +  +   
Sbjct: 92  VKAGELLVQQDIGTETAQLRAAEAAVALAKVTLDRSRKMLATKTVPEANYDNAEAQYKQA 151

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
           +++   +  T  +KTI +P +G  +  +  +     ++ +P++ +       ++   V  
Sbjct: 152 LAQADAIRATIAKKTIRAPFSGL-LGIRQVNIGQIIKEGEPIVSLQ-SLDPIFVNFLVPQ 209

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           +Q+  ++ GY   VR         +     I  I+P +     N++ Q            
Sbjct: 210 QQLPLIRTGYP--VRLTSDGLPDGQTINGAITAINPDVDASSRNIRVQ-----------A 256

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTL 422
              +    LR G  A V       + 
Sbjct: 257 TLGNQGELLRPGMFANVAVVLPKKSP 282



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 48/143 (33%), Gaps = 1/143 (0%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E  V++ G +     V  I +  +G +     E G+ +  G  L+  +    T  +   +
Sbjct: 56  ESLVTAVGSLEAVQGV-TITAEVTGKVTVIAFEPGTHVKAGELLVQQDIGTETAQLRAAE 114

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            ++   +  +D  +  L          + A    ++ L        +   K      S +
Sbjct: 115 AAVALAKVTLDRSRKMLATKTVPEANYDNAEAQYKQALAQADAIRATIAKKTIRAPFSGL 174

Query: 161 YRSLKMKLTRMRSIYLNRLDLEN 183
               ++ + ++       + L++
Sbjct: 175 LGIRQVNIGQIIKEGEPIVSLQS 197


>gi|296331190|ref|ZP_06873663.1| putative ABC transporter component [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675932|ref|YP_003867604.1| putative ABC transporter [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151641|gb|EFG92517.1| putative ABC transporter component [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414176|gb|ADM39295.1| putative ABC transporter component [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 397

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 66/185 (35%), Gaps = 1/185 (0%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG++  E           G IKK  V+ G Q+ +G  L  +E  + +D ++   + I+  
Sbjct: 63  SGKVEPEKQQKVYIDSEKGSIKKTYVKEGDQVKKGDKLFEYEGEDHSDEVEQANLQIEMT 122

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              I   + ++     +     K  +S+ +  +D    +    S++          +L  
Sbjct: 123 NLQISRLQKSITETEKQLKSAGKEEKSQLQDEVD-QANFDLKTSQLELKQHQKELAALTK 181

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                     +   +++ +  +    +  Q     ++ +     + ++ +N+      K 
Sbjct: 182 NKGSNVITSKHDGIVQSVNQDIADGATGDQATGPYIQIVSTGKYLVKSQINELLMDTIKK 241

Query: 227 TLELR 231
             ++R
Sbjct: 242 GSKVR 246



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 72/198 (36%), Gaps = 7/198 (3%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENI 234
             ++ ++++   ++         +     LFE +     +++ Q    +  + L++    
Sbjct: 71  QQKVYIDSEKGSIKKTYVKEGDQVKKGDKLFEYEGEDHSDEVEQANLQIEMTNLQISRLQ 130

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                  + +     E   +  + + + + DL+ +Q        +L  L K +    I S
Sbjct: 131 KSITETEKQLKSAGKEEKSQLQDEVDQANFDLKTSQLELKQHQKELAALTKNKGSNVITS 190

Query: 295 PIAGTIVY-NQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
              G +   NQ  +      Q + P ++IV  +    +++++    +  +KKG    V  
Sbjct: 191 KHDGIVQSVNQDIADGATGDQATGPYIQIV-STGKYLVKSQINELLMDTIKKGSKVRVTL 249

Query: 353 PHYADIREKKFKAIIEKI 370
                  E ++K  +  I
Sbjct: 250 ---KTGGEGEWKGKVTSI 264


>gi|316932925|ref|YP_004107907.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           DX-1]
 gi|315600639|gb|ADU43174.1| secretion protein HlyD family protein [Rhodopseudomonas palustris
           DX-1]
          Length = 266

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 71/211 (33%), Gaps = 19/211 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRE-NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           V + D  +   ++Y    +L++ ++++    L +  + +D A    +        +L+  
Sbjct: 55  VREGDEARTGALIYTLDDDLQQADLNQNLATLANAKQSFDRAQS-LSKTGSGTQANLDSA 113

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                   +++   +    ++ I +P+ GT+     F         +P++ I+P      
Sbjct: 114 ISALRVAEARVETSKTRLARREIRAPVTGTVQQI-YFREGEMVAAQKPVLSILPPGN-MK 171

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN-----NLQTQ 384
           IR  V   ++  +  G    V      D       A I  I              + +++
Sbjct: 172 IRFYVPEPELPKLAIGDKVRVS----CDNCAPDLSAEIYFISTTAEYTPPVIYSLDERSK 227

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             Y +  +    A       LR G P  V  
Sbjct: 228 LVYLIQARPNKPA------SLRVGQPVSVYV 252



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 39/124 (31%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E +++ +    SG + K  V  G +   G  + T +D      ++    ++ N +   D
Sbjct: 35  VEADLIFVSPDESGRVTKLTVREGDEARTGALIYTLDDDLQQADLNQNLATLANAKQSFD 94

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +S     +     L+ A  +                 +     ++   + +  +   M
Sbjct: 95  RAQSLSKTGSGTQANLDSAISALRVAEARVETSKTRLARREIRAPVTGTVQQIYFREGEM 154

Query: 172 RSIY 175
            +  
Sbjct: 155 VAAQ 158


>gi|218708136|ref|YP_002415757.1| membrane protein [Vibrio splendidus LGP32]
 gi|218321155|emb|CAV17105.1| Membrane protein [Vibrio splendidus LGP32]
          Length = 368

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  F    + +  L+ + E++ I +P  G +   ++     Y Q       IV     
Sbjct: 142 EAEANFYSLSADIESLKASIERREIRAPFDGKV-GIRNVYLGQYLQSGT---DIVRLEDT 197

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V+   I  +  G    +    Y    EK F+  I  I+P +S Q   +Q Q 
Sbjct: 198 SVMRLRFTVSQTDISRIHVGQAIDIFVDAYP---EKPFEGSISAIEPAVSIQSGLIQVQ- 253

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +N+ +LR+G  A    
Sbjct: 254 ----------ADIPNNDGKLRSGMFARANI 273


>gi|114048134|ref|YP_738684.1| secretion protein HlyD family protein [Shewanella sp. MR-7]
 gi|113889576|gb|ABI43627.1| secretion protein HlyD family protein [Shewanella sp. MR-7]
          Length = 337

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 12/167 (7%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E + + + +P   +IK+  V  G Q+  G  LL  +       +  ++  +K  +  +
Sbjct: 51  TVERDRLTLTAPVGELIKRVNVVEGQQVQAGEVLLELDSTAAQARLGQRQAELKQAQAKL 110

Query: 111 DT------------EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           D              ++ALD  N       + FE  ++     +       +       S
Sbjct: 111 DEAVTGARSEDIDKARAALDGANASVKEARQNFERTQQLFKTKVLSQADLDAARAARDTS 170

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
              ++   +  R+         LE   + + A ++   ++   +K+L
Sbjct: 171 LAKQAEAEQSLRLLQNGTRSEQLEQARAAVEAAMAGVAQEQKALKDL 217



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 37/314 (11%), Positives = 94/314 (29%), Gaps = 37/314 (11%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           ++ ++  L     +        E ++ Q  + L +  ST ++       +  +  + KL 
Sbjct: 52  VERDRLTLTAPVGELIKRVNVVEGQQVQAGEVLLELDSTAAQARLGQRQAELKQAQAKLD 111

Query: 170 RMRSIYLNRLDLENKSSL--LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              +   +    + +++L    A +   +++    + LF+   +SQ DL+        S 
Sbjct: 112 EAVTGARSEDIDKARAALDGANASVKEARQNFERTQQLFKTKVLSQADLDAARAARDTSL 171

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +  E     + +         E                ++  +  +   +K  +++   
Sbjct: 172 AKQAEAEQSLRLLQNGTRSEQLEQARAAVEAAMAGVAQEQKALKDLSLVAAKPAVVDTLP 231

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +                    +       L+ ++      Y+R  +    +  VK G  
Sbjct: 232 WR------------------VGDRVAAGSQLIGLLAIEHP-YVRVYLPATWLDRVKAGSQ 272

Query: 348 ATVRFPHYADIREKKFKAIIEKI------DPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
             +        R +     +  I       P  +  + +     Y      +TD+  +  
Sbjct: 273 VKILVDG----RTQPIAGTVRNIRSQPAYTPFYALNERDRARLMY------LTDIDIAPE 322

Query: 402 NIELRNGFPAEVLF 415
             +L  G   EVL 
Sbjct: 323 GEDLPTGMALEVLL 336


>gi|117618003|ref|YP_854551.1| RND efflux transporter [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117559410|gb|ABK36358.1| RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family, MFP
           subunit [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 368

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 69/212 (32%), Gaps = 25/212 (11%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           FE     + D              LR ++ +        +   +       +        
Sbjct: 85  FESGDTVKPDQLLLSLDASVEKANLRASMAKLPAAKAKFDRYQNLFTKGSIS-----RDQ 139

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L+  + T+    + +  L+ T  ++ + +P AG +V  ++     Y Q       IV   
Sbjct: 140 LDDTEATYRSLEADIESLKSTIARREVRAPFAG-VVGLRNVFLGQYLQPGT---DIVRLE 195

Query: 326 KLTYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             + +R +  V    I  ++      +    Y   +   FK  I  I+P ++ Q   +Q 
Sbjct: 196 DTSVMRLRFTVPQTDISRIRLNQDILINVDSYPHRQ---FKGHISAIEPAVNYQSGLIQV 252

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           Q               +N+ +LR+G  A    
Sbjct: 253 Q-----------ADIPNNDGQLRSGMFARASI 273



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 47/141 (33%), Gaps = 1/141 (0%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I     E+G  +     LL+ +       +      +   +   D  ++     + 
Sbjct: 76  QSGTIDSISFESGDTVKPDQLLLSLDASVEKANLRASMAKLPAAKAKFDRYQNLFTKGSI 135

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             D L+    +      D      +   +      + V     + L +      + + LE
Sbjct: 136 SRDQLDDTEATYRSLEADIESLKSTIARREVRAPFAGVVGLRNVFLGQYLQPGTDIVRLE 195

Query: 183 NKSSLLRALLSSHQKDLTMMK 203
           + +S++R   +  Q D++ ++
Sbjct: 196 D-TSVMRLRFTVPQTDISRIR 215


>gi|332836509|ref|XP_003313092.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase
            beta-3 isoform 2 [Pan troglodytes]
          Length = 1167

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 81/207 (39%), Gaps = 8/207 (3%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              T  L+D    +    RC +     AL    +  D  E   E++  Q  +F  +   + 
Sbjct: 920  TLTRRLLDGLAQAQAEGRCRL--RPGALGGAADVEDTKEGEDEAKRYQ--EFQNRQVQSL 975

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK- 208
             ++    + +  +     L +        + L+  ++  + L   ++++   ++ + ++ 
Sbjct: 976  LELREAQVDAEAQRRLEHLRQALQRLREVV-LDANTTQFKRLKEMNEREKKELQKILDRK 1034

Query: 209  --NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              N++S+  +  + +   + T   R +I E  N +R + E   + +       +++ + L
Sbjct: 1035 RHNSISEAKMRDKHKKEAELTEINRRHITESVNSIRRLEEAQKQRHDRLVAGQQQVLQQL 1094

Query: 267  EQNQRTFADEMSKLTILEKTREQKTIL 293
             + +     ++++    ++ R  + I 
Sbjct: 1095 AEEEPKLLAQLAQECQEQRARLPQEIR 1121


>gi|328949672|ref|YP_004367007.1| S-layer domain-containing protein [Marinithermus hydrothermalis DSM
           14884]
 gi|328449996|gb|AEB10897.1| S-layer domain-containing protein [Marinithermus hydrothermalis DSM
           14884]
          Length = 916

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E I    L  L + ++  LR  +    + L  L  +   LE    ++++         
Sbjct: 73  VLETIREEQLAQLDEETLTALRNAVQELAAELSSLGVRVGALEDNAATKDDVARLEAAIN 132

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 V   G+    ++L+    R+ +  +       ++  L   L + + DL  +++L
Sbjct: 133 ELRAQPVPEPGVD--EKALRELAERVEAASIAADTALAQAQQLNEQLGAVEGDLAALRSL 190

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            E NA S   LN    ++ +  LEL++ +   + + +   ++   A+ +    ++E +  
Sbjct: 191 VEANADSIKALNDLAVLLNQDVLELQDRVTALEKVGQ--PDVSGLASQDQVVAVQEFATA 248

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
           L  +    ++ +S L       +++          V    F+ +     
Sbjct: 249 LRNDLVNLSNRVSALDTQVADIDERL-------QTVEANVFTVTGSVNA 290


>gi|298480994|ref|ZP_06999189.1| periplasmic component of efflux system [Bacteroides sp. D22]
 gi|298273017|gb|EFI14583.1| periplasmic component of efflux system [Bacteroides sp. D22]
          Length = 406

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 69/212 (32%), Gaps = 11/212 (5%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDL 266
             +++ D    +  +            E +   ++        E +L      ++   + 
Sbjct: 86  QLIAEMDRVTLQSELASQQATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ + ++    + L   E+     TI SPI G ++  +   +            L  I  
Sbjct: 146 QKAKSSYDSSKASLAKAERNLSYATITSPIDGVVIS-RDVEAGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 + A V    I  V +G  A+     Y +     F+ ++ +I   +    +   T
Sbjct: 205 DLTQMQVVADVDEADIGGVMEGQRASFTVDAYPND---VFEGVVTQIR--LGDASSTSST 259

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                V+     ++  + +++L+    A V  
Sbjct: 260 SSTTTVVTYEVVISAPNPDLKLKPRLTANVTI 291



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 69/186 (37%), Gaps = 4/186 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+++G I     V E+ +  SGII K  V+  S++ +G  +   + +     +  +
Sbjct: 45  ISNSVTATGTIEPVTEV-EVGTQVSGIIDKIYVDYNSEVTKGQLIAEMDRVTLQSELASQ 103

Query: 100 KVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + +    +   + +K   +    L+ K  + +  FE            Y S+ + +    
Sbjct: 104 QATYDGAKAEYEYQKKNYERSKGLHEKSLISDTDFEQALYNYQKAKSSYDSSKASLAKAE 163

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +  Y ++   +  +             S      L +   DLT M+ + + +      +
Sbjct: 164 RNLSYATITSPIDGVVISRDVEAGQTVASGFETPTLFTIAADLTQMQVVADVDEADIGGV 223

Query: 217 NQQERI 222
            + +R 
Sbjct: 224 MEGQRA 229


>gi|297518538|ref|ZP_06936924.1| Inner membrane protein yibH [Escherichia coli OP50]
          Length = 349

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 96/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +  +IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 347


>gi|296158698|ref|ZP_06841527.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
           Ch1-1]
 gi|295890903|gb|EFG70692.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
           Ch1-1]
          Length = 468

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 54/145 (37%), Gaps = 4/145 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + +++ G +    NV  +    SG +++   + G  + +G  L   +      
Sbjct: 109 ATQGEMPVVLTALGTVTPLANV-TVLPQLSGTLQEVYFKEGQMVKKGDVLAQIDPRPYQI 167

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +D  + ++      + T +  L     L ++  +  +  +++   +  + G   S  + 
Sbjct: 168 SLDNAQGTLARDEALLQTARLDLKRYQTLLSQDSIASQQVDTQASLVRQYEGTVKSDKAN 227

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYL 176
           +  + +  VY  +   ++    +  
Sbjct: 228 IDTFKLDLVYARITAPVSGRVGLRQ 252


>gi|257091797|ref|YP_003165438.1| RND family efflux transporter MFP subunit [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257044321|gb|ACV33509.1| efflux transporter, RND family, MFP subunit [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 449

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 117/326 (35%), Gaps = 30/326 (9%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL-LDFLGKYHSTCSKVFNYGISS 159
           ++    +   + EK  + +  N   + + +   +++ + +D+   Y              
Sbjct: 40  MTAAAAKGAGEPEKRKVLYYRNPMGLPDTSPVPKKDSMGMDYTPVYADEQDDEPASANQI 99

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
              + K++   +R+    R  L +++      +   ++ L  +   FE   V +  +N  
Sbjct: 100 RISTEKVQKLGVRTEAAQRRTL-DRTVRAAGRIEPDERRLFTIAPKFE-GYVERLYVNVT 157

Query: 220 ERIVYKSTL-------ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            + V K          EL     E     + +  L  EA  +    +++++    Q  R 
Sbjct: 158 GQPVGKGQPLFEVYSPELVSAQREYTVAAQGVTALK-EAGGQAQTGMQDLANASLQRLRN 216

Query: 273 FADEMSKLTILEKTREQK---TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +     ++  L ++ E K   T  SP+AG +   ++          + L ++   S +  
Sbjct: 217 WDVSPEQVKALAESSEAKRTLTFRSPVAGIVTEKKAV-QGMRFMPGEALYQVADLSSVWV 275

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I A V  + I  V+ G  A +R   Y D   K F+  +  + P +      +       V
Sbjct: 276 I-ADVFEQDIGLVRTGARAKIRINAYPD---KLFEGAVTYVYPTLKSDTRTV------PV 325

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
            ++      ++  + L+    A+V  
Sbjct: 326 RVE-----LANPGLLLKPAMFAQVEL 346



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 67/184 (36%), Gaps = 10/184 (5%)

Query: 40  IEISVSSSGEILNEDNV-VEIKSPFSGIIKKFQVE-NGSQILQGTPLLTF---EDIETTD 94
           ++ +V ++G I  ++     I   F G +++  V   G  + +G PL      E +    
Sbjct: 121 LDRTVRAAGRIEPDERRLFTIAPKFEGYVERLYVNVTGQPVGKGQPLFEVYSPELVSAQR 180

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
              +    +  L+      ++ +  L N      + ++   EQ+        +  +  F 
Sbjct: 181 EYTVAAQGVTALKEAGGQAQTGMQDLANASLQRLRNWDVSPEQVKALAESSEAKRTLTFR 240

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             ++ +    K  +  MR +    L      S +  +    ++D+ +++      A ++ 
Sbjct: 241 SPVAGIVTE-KKAVQGMRFMPGEALYQVADLSSVWVIADVFEQDIGLVRT----GARAKI 295

Query: 215 DLNQ 218
            +N 
Sbjct: 296 RINA 299


>gi|221202352|ref|ZP_03575385.1| secretion protein HlyD family [Burkholderia multivorans CGD2M]
 gi|221209009|ref|ZP_03582005.1| secretion protein HlyD family [Burkholderia multivorans CGD2]
 gi|221171131|gb|EEE03582.1| secretion protein HlyD family [Burkholderia multivorans CGD2]
 gi|221177766|gb|EEE10180.1| secretion protein HlyD family [Burkholderia multivorans CGD2M]
          Length = 400

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/280 (11%), Positives = 80/280 (28%), Gaps = 41/280 (14%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            + T      Y +     ++  K                K   + A L S   + ++ + 
Sbjct: 62  QNDTQLNATGYVVPQRKAAVASKGQGRVEWLGVLEGTRVKKDEIIARLESRDVEASLAQA 121

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L +   V++ +L  Q+  +  + + LR              +L  +        + +   
Sbjct: 122 LAQVK-VARANLGVQQAELKDAEIALRRTAALAPRGAVPAAQLDTDTA-----RVNKARA 175

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-------------SSSNY 311
            +   +   A   +     +   +Q  I +P  G ++   +              S    
Sbjct: 176 SVNSGEAAVASAEANARAAQVAVDQTVIRAPFDGIVLAKHANVGDNITPFSSASDSKGAV 235

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 +  +        + A V    I  ++ G    ++     D+R   F   + +I 
Sbjct: 236 V----TIADM----DTLEVEADVAESNIAKIRAGQPCEIQLDALPDMR---FAGRVSRIV 284

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           P + +    +       V ++     F D +  +     A
Sbjct: 285 PTVDRSKATV------LVKVR-----FVDRDDRVLPDMSA 313



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 39/115 (33%), Gaps = 4/115 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  ++++G ++ +     + S   G ++   V  G+++ +   +   E  +    +    
Sbjct: 64  DTQLNATGYVVPQRKA-AVASKGQGRVEWLGVLEGTRVKKDEIIARLESRDVEASLAQAL 122

Query: 101 VSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +K  R ++     E    +    +   L         QL     + +   + V
Sbjct: 123 AQVKVARANLGVQQAELKDAEIALRRTAALAPRGAVPAAQLDTDTARVNKARASV 177


>gi|221214160|ref|ZP_03587132.1| secretion protein HlyD family [Burkholderia multivorans CGD1]
 gi|221165815|gb|EED98289.1| secretion protein HlyD family [Burkholderia multivorans CGD1]
          Length = 400

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/280 (11%), Positives = 80/280 (28%), Gaps = 41/280 (14%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            + T      Y +     ++  K                K   + A L S   + ++ + 
Sbjct: 62  QNDTQLNATGYVVPQRKAAVASKGQGRVEWLGVLEGTRVKKDEIIARLESRDVEASLAQA 121

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L +   V++ +L  Q+  +  + + LR              +L  +        + +   
Sbjct: 122 LAQVK-VARANLGVQQAELKDAEIALRRTAALAPRGAVPAAQLDTDTA-----RVNKARA 175

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-------------SSSNY 311
            +   +   A   +     +   +Q  I +P  G ++   +              S    
Sbjct: 176 SVNSGEAAVASAEANARAAQVAVDQTVIRAPFDGIVLAKHANVGDNITPFSSASDSKGAV 235

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 +  +        + A V    I  ++ G    ++     D+R   F   + +I 
Sbjct: 236 V----TIADM----DTLEVEADVAESNIAKIRAGQPCEIQLDALPDMR---FAGRVSRIV 284

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           P + +    +       V ++     F D +  +     A
Sbjct: 285 PTVDRSKATV------LVKVR-----FVDRDDRVLPDMSA 313



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/115 (11%), Positives = 39/115 (33%), Gaps = 4/115 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  ++++G ++ +     + S   G ++   V  G+++ +   +   E  +    +    
Sbjct: 64  DTQLNATGYVVPQRKA-AVASKGQGRVEWLGVLEGTRVKKDEIIARLESRDVEASLAQAL 122

Query: 101 VSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +K  R ++     E    +    +   L         QL     + +   + V
Sbjct: 123 AQVKVARANLGVQQAELKDAEIALRRTAALAPRGAVPAAQLDTDTARVNKARASV 177


>gi|168828765|gb|ACA33869.1| skeletal muscle myosin heavy chain [Ctenopharyngodon idella]
          Length = 1751

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 81/211 (38%), Gaps = 12/211 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            E  + ++ K  S++  +  +  E   L    +  N     L+K   + ++ L ++  KY 
Sbjct: 1405 EQVEAVNSKCASLEKTKQRLQGEVEDLMIDVERANGLAANLDKKQRNFDKILAEWKQKYE 1464

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               +++   G     RSL  +L +M++ Y   LD   +   L+    + Q++++ +    
Sbjct: 1465 EGQAEL--EGAQKEARSLSTELFKMKNSYEETLD---QLETLKRENKNLQQEISDLTEQI 1519

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             +   S ++L + ++ V     E++  + E +  L H         LE      EI R L
Sbjct: 1520 GETGKSIHELEKAKKTVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKL 1579

Query: 267  EQNQRTFADEM---SKLTILEKTREQKTILS 294
             +             ++    ++     + S
Sbjct: 1580 AEKDEEMEQIKRNSQRVIESMQSTLDSEVRS 1610



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/241 (11%), Positives = 75/241 (31%), Gaps = 22/241 (9%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  +  ++   +  +  +++ ++  ++ EKS      +      +A    E  L      
Sbjct: 1195 LRKKQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLSSNMEAVAKAEANLEKMCRT 1254

Query: 145  YHSTCSKVFNY------GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                 S++          I+ +        T          + E   S L     +  + 
Sbjct: 1255 LEDQLSEINPRNDGNLRQINDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTRQ 1314

Query: 199  LTMMKNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +K   E+   ++N L               +Q     ++  EL+  + +  + +   
Sbjct: 1315 IEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQW 1374

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               Y+   ++    L+E  + L Q  +   +++  +     + E+      + G +    
Sbjct: 1375 RTKYETDAIQRTEELEESKKKLAQRLQEAEEQVEAVNSKCASLEKTKQR--LQGEVEDLM 1432

Query: 305  S 305
             
Sbjct: 1433 I 1433



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K      L   I+ E+S    L  K   L+   
Sbjct: 1059 EGDLKLAQESIMDLENDKQQSEEKIKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1118

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++ +  K       
Sbjct: 1119 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIGMNKKREA---- 1172

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1173 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1227

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +       + +   +LE+  RT  D++S++        ++ 
Sbjct: 1228 KMEIDDLSSNMEAVAKAEANLEKMCRTLEDQLSEINPRNDGNLRQI 1273


>gi|82702632|ref|YP_412198.1| secretion protein HlyD [Nitrosospira multiformis ATCC 25196]
 gi|82410697|gb|ABB74806.1| Secretion protein HlyD [Nitrosospira multiformis ATCC 25196]
          Length = 395

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 14/154 (9%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-------- 116
           G++ +  V  G  ++QG PLL  +D      ++ ++   +     ++  K+         
Sbjct: 70  GVVTQIMVAEGQAVMQGQPLLKMDDSIQRATVEQQRSQAEAALALLEELKAQPRKEVLDV 129

Query: 117 -LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            L  L+     L  A    ++Q   +     S    V +  I++V  +        R+  
Sbjct: 130 SLAQLDYAAANLRTAETQLQKQQASYDLDPRSVSKDVLDNAINAVNAARANLEVASRNYQ 189

Query: 176 LNRL-----DLENKSSLLRALLSSHQKDLTMMKN 204
           L +      D+ N+     AL +++Q  L ++K 
Sbjct: 190 LTKAGAWSYDIRNQERQYAALSNTYQAGLALLKK 223


>gi|21242803|ref|NP_642385.1| cation efflux system protein [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21108288|gb|AAM36921.1| cation efflux system protein [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 371

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 17/177 (9%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + + +  LR +   Y  A       L     D++Q +    +  ++  +        T+
Sbjct: 108 AVAQSEAQLRKLENSYRRATQLVGQQLVSA-ADVDQLKFDVENSRAQHRLAALELSYTTV 166

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +PI+G I      +  N+ Q + P+ +IV           V  +++  +K G   T+  
Sbjct: 167 QAPISGVIASRSIKT-GNFVQINTPIFRIV-DDSQLEATLNVPERELATLKSGQPVTLLA 224

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                   ++F   +++I P++            + V+      AF      L+ G 
Sbjct: 225 DALP---GQQFVGKVDRIAPVVDSGSGT------FRVV-----CAFGQGAEALQPGM 267



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 4/161 (2%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  +        + +  SG+     VE G ++  G  L+  +       +   +  ++
Sbjct: 59  TGTAALEPRAEAQVV-AKTSGVALSVMVEEGQKVSAGQALVRLDPDRAHLAVAQSEAQLR 117

Query: 105 NLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            L   +    +     L +  DV +  F+    +    L     + + V    IS V  S
Sbjct: 118 KLENSYRRATQLVGQQLVSAADVDQLKFDVENSRAQHRLAALELSYTTV-QAPISGVIAS 176

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +K      I      + +  S L A L+  +++L  +K+
Sbjct: 177 RSIKTGNFVQINTPIFRIVDD-SQLEATLNVPERELATLKS 216


>gi|313673657|ref|YP_004051768.1| efflux transporter, rnd family, mfp subunit [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940413|gb|ADR19605.1| efflux transporter, RND family, MFP subunit [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 390

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 71/234 (30%), Gaps = 29/234 (12%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              S   +  +     ++      +    +     +++    +A     +K     K+L 
Sbjct: 90  EISSPEIHEKLKFADAAVAEADNAISQGEVGLKVAQDQLRQAQAQYELAEKTYKRYKSLL 149

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              ++S+ + +Q E     +           +     IN+   + N   A          
Sbjct: 150 ASESISKQEFDQVEAQYKVALEGKNAAERAVRLAEERINQAKTKKNQAIAGK-------- 201

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                                    I++P  G ++  +     N A   QP++KI   S 
Sbjct: 202 --------------NEASAYVGYTRIVAPFDGVVLE-KLIDVGNLAAPGQPIIKI--GSN 244

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
              I   V+    Q VK G    V+     D   K+FK+ + +I P I     N
Sbjct: 245 KNVIYTYVSESMFQKVKVGDQLDVKI----DSMGKEFKSKVLEIAPNIDPATRN 294


>gi|307316624|ref|ZP_07596067.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
 gi|306897822|gb|EFN28565.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
          Length = 410

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 56/354 (15%), Positives = 123/354 (34%), Gaps = 23/354 (6%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
                +  I +P  G I+K     G+ + +G  L T  +          +  + +LR   
Sbjct: 37  TVNARLAVINAPIDGEIEKPAPRIGTPVAEGETLATIRNQRVN------RAILASLRSDH 90

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            T    +  L  + D L +  +    +L  F     ++  +        V  S    +  
Sbjct: 91  RTAVERVAALRRERDELARLRDDLAGRLDIFRNATIASLEREVQILQKRVEVSRAQDVVA 150

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            R   + R DLE+K    R ++ + +          E + ++  +L QQ     +  + +
Sbjct: 151 -RVDLVRRQDLESKGIFTRKMVEAAEAAGAAAGGELEISNLT-VELLQQRLNAVRQGIFI 208

Query: 231 RENIHEQKNMLRHINELYDEANLEFAN---YLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              + + +N + +  +  DE  +   +    + E     +Q  +  A+E  ++  LE   
Sbjct: 209 ---VGDGQNDVPYSRQRQDEVIVRIHDLNTRIAENEARAKQTDQQIAEEERRVLSLE--- 262

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
              TI SP  G +      S SN    ++ +M+I+   +  ++   V       +  G  
Sbjct: 263 -AATIPSPFDGVVWSRNVISGSNVVLNNE-MMRIL-DCRELFVDILVPEVDYDEIYPGRE 319

Query: 348 ATVRFPHYADIREKKFKAIIEK---IDPIISQQDNNLQTQEYYEVILKITDLAF 398
           A V+      +   + +AI      ++      +     +    + + +   A 
Sbjct: 320 AEVQLFGRGHVFRGRVQAIKGSSAVVEKDTLAANEPETEERNARIRVMLAPSAL 373


>gi|298376148|ref|ZP_06986104.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           3_1_19]
 gi|298267185|gb|EFI08842.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           3_1_19]
          Length = 443

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 55/397 (13%), Positives = 116/397 (29%), Gaps = 101/397 (25%)

Query: 20  MTLLSIIGIIGLITWS------ILLPIEISVS-----SSGEILNEDNVVEIKSPFSGIIK 68
           + ++ I G+IG +  S      +   ++  V      +SG+++       I SP +  I 
Sbjct: 56  IAVVLIGGVIGFMQTSLQRKDLVFSTVDKGVIEVSVSASGKVVPAFE-EIINSPINSRIV 114

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +   + G  +  GTP+L  + +        +    +  R  +D  +              
Sbjct: 115 EIYKKGGDSVDVGTPILKLDLLSAETDYKKQLDEEQMKRLQLDQLR-------------- 160

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                            ++          + ++R++L  K   L
Sbjct: 161 --------------------------------IQNRNKLSEMEMQLKVSRMELNRKEVEL 188

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R             + L    A + + + Q E     S L+L+E+  + +N     +  Y
Sbjct: 189 RNE-----------RYLDSLGAGTTDKVRQVELDYNVSVLKLKEDEQKYENEKSLTDADY 237

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
               L+   + K     L + +RT  D                I SP    + Y      
Sbjct: 238 KVKELDLNIFRK----SLAETKRTLED--------------AQIRSPRKAILTYVN-NEV 278

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                Q   +  IV       I  ++       +  G  A V+          K   ++ 
Sbjct: 279 GAQVSQGSRVA-IVSDLSHFKIEGEIADTYGDRIAAGSKAVVKI------GNDKLDGVVS 331

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            + P+             + V L+  +     + +++
Sbjct: 332 DVTPLS------KNGVISFTVQLEEDNHRRLRSGLKI 362


>gi|294626733|ref|ZP_06705328.1| membrane fusion protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598981|gb|EFF43123.1| membrane fusion protein [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 414

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 66/192 (34%), Gaps = 26/192 (13%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSI-------------LLPI---------EISV 44
              +   P  ++R   +    I+ ++  +                P+            +
Sbjct: 14  DRQRPATPPPVRRTGWILAAVIVVIVLAAAAWWFTRRPVVKVQTAPVVAISAGSSSASVL 73

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            +SG +     +  + +  +G +++  +E G  + QG  + T + ++      L    + 
Sbjct: 74  DASGYV-VARRMATVSAQVTGKVREVMIEEGMCVQQGQVMATLDPLDADAQRSLSASQLS 132

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESR---EEQLLDFLGKYHSTCSKVFNYGISSVY 161
             R  +D  ++ L   N     L+    ++     Q    + +  +  +++ N   +   
Sbjct: 133 AARSQVDNMQAQLAVANADATRLQSLVGAQLVSRSQYDQAIAQRDALRAQLQNAQRNVQV 192

Query: 162 RSLKMKLTRMRS 173
            S ++ +  +RS
Sbjct: 193 ASDQLAIAGIRS 204



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 58/217 (26%), Gaps = 26/217 (11%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--EFANYLKEISR 264
            + ++S + L+     V     +L     +   +   +       +   +       +  
Sbjct: 122 AQRSLSASQLSAARSQVDNMQAQLAVANADATRLQSLVGAQLVSRSQYDQAIAQRDALRA 181

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP------- 317
            L+  QR       +L I     +   + +P AG +V  ++                   
Sbjct: 182 QLQNAQRNVQVASDQLAIAGIRSDFNVVRAPFAG-VVTAKAAQPGEIVSPLSAGGGFTRT 240

Query: 318 -LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +  IV   +   I  +V    I  V+           Y + +       +  I P   +
Sbjct: 241 GIGTIV-DMESLEIEVEVGESYIGRVQPKMPVEAVLNAYPEWK---IPGEVIAIIPTADR 296

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                       V +++   A    +  +       V
Sbjct: 297 GKAT--------VKVRV---ALKVKDPRIVPEMGVRV 322


>gi|226951200|ref|ZP_03821664.1| heavy metal RND efflux membrane fusion protein CzcB family protein
           [Acinetobacter sp. ATCC 27244]
 gi|226838058|gb|EEH70441.1| heavy metal RND efflux membrane fusion protein CzcB family protein
           [Acinetobacter sp. ATCC 27244]
          Length = 499

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 24/171 (14%)

Query: 252 NLEFANYLKEISRDLEQNQRTFADEM-------SKLTILEKTREQKTILSPIAGTIVYNQ 304
             EF   L+   R L Q  R     +        ++    + +   T+ +PI+G I   +
Sbjct: 173 QTEFLAVLRTGDRSLIQASRQRLQLLGIPQNVIHQVERTRRVQSNITLQAPISGFIDSLE 232

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q L  I   +   ++ A V  +QI  +K+G +    F  ++    KK  
Sbjct: 233 VRN-GMALAMGQTLATIKGIN-PIWLEAAVPERQIAGIKRGMSVEANFAAFS----KKVT 286

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  I P +      +      +V +++ + +      +L+ G  A V  
Sbjct: 287 GKVIDILPTLDTTSRTI------KVRIELPNPS-----GQLKPGMFASVNI 326


>gi|223937301|ref|ZP_03629207.1| secretion protein HlyD family protein [bacterium Ellin514]
 gi|223894086|gb|EEF60541.1| secretion protein HlyD family protein [bacterium Ellin514]
          Length = 302

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 81/256 (31%), Gaps = 17/256 (6%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                L     + R   +  +  E ++   +  + + + +    K   E           
Sbjct: 53  QEIMELDAAELQARGKEVAAILAEMEAGPRKEEIETAKNEWAAQKADLEFAEADAKRAEI 112

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
             +    S  E    +     + + ++      +L  A    E                +
Sbjct: 113 LFKQNTISPNERDRAVTRADGLRKSVSAAKSRYDLLLAGTRPE----------RIDQARA 162

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK-IVPHSKLTYIRAKVTPK 337
           +L  ++    +  I+SP   +++   S    +    ++ +   I+P     ++R  V   
Sbjct: 163 QLAQIDAQLREMKIVSPTN-SVMEVLSVKVGDVLAANREVATLILPQH--LWVRVFVPET 219

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            + H+  G    VR   +     K F+  +E+I+        N+QT E     +    + 
Sbjct: 220 WLGHIHLGEAVKVRVDSFP---GKDFEGTVEQINRAAEFTPRNVQTAEERIKQVFGVKIR 276

Query: 398 FSDNNIELRNGFPAEV 413
             +   +LR G  A+ 
Sbjct: 277 LKNEEDKLRAGMSADA 292



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 13/193 (6%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + SG I  ++    + S + G ++K  V+ G  +  G  ++  +  E           + 
Sbjct: 18  AVSGTIDVDEVR--VASRYGGRVEKIFVQEGDALKPGQEIMELDAAELQARGKEVAAILA 75

Query: 105 NLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +       + E +  ++   K D+     +++  ++L                    + 
Sbjct: 76  EMEAGPRKEEIETAKNEWAAQKADLEFAEADAKRAEILFKQNTISPNERDRAVTRADGLR 135

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN------D 215
           +S+    +R   +         +    RA L+     L  MK +   N+V +       D
Sbjct: 136 KSVSAAKSRYDLLLAGTRP--ERIDQARAQLAQIDAQLREMKIVSPTNSVMEVLSVKVGD 193

Query: 216 LNQQERIVYKSTL 228
           +    R V    L
Sbjct: 194 VLAANREVATLIL 206


>gi|304322013|ref|YP_003855656.1| cation efflux system transmembrane protein [Parvularcula
           bermudensis HTCC2503]
 gi|303300915|gb|ADM10514.1| cation efflux system transmembrane protein [Parvularcula
           bermudensis HTCC2503]
          Length = 574

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 62/164 (37%), Gaps = 19/164 (11%)

Query: 264 RDLEQNQRTFADEMS---KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
             + Q  R+   + +   +LT   +  E+  + +   GT+   Q  +  +Y +   P+++
Sbjct: 170 ASVRQRLRSLGMQNAAIDRLTETRQVIERVPVYAEAGGTVAELQVRN-GDYVKPGTPILR 228

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +  ++ +  I A V    +  V+ G  A + FP   D      K  ++ I P I  +   
Sbjct: 229 LQSYADVWVI-ASVPESDLPLVQAGMPAELDFPSAPDAPG---KGQVDYIYPTIDPKTRT 284

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
                   V +++ +++       LR G  A++           
Sbjct: 285 AD------VRIEVDNVSGY-----LRPGAYADIRLNIGGRPRLS 317



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTF 87
            G + + QV NG  +  GTP+L  
Sbjct: 206 GGTVAELQVRNGDYVKPGTPILRL 229


>gi|265762985|ref|ZP_06091553.1| ABC transporter permease [Bacteroides sp. 2_1_16]
 gi|263255593|gb|EEZ26939.1| ABC transporter permease [Bacteroides sp. 2_1_16]
          Length = 415

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 67/202 (33%), Gaps = 25/202 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+    L L+ +   L   L+  Q+       L +
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQEHLRLKQERIGLNKELAVKQRRYEQYSRLIK 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  ++Q +          +  +L             I+E   + N    + +  +  ++ 
Sbjct: 168 EQLIAQEEFRLAAEEYEAARAQLE-----------VIDERIRQDNFFRESQVHSLDENIR 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+ A    +        E   + +PI G +    +          + + +I+     
Sbjct: 217 NMKRSLALVRER-------VENLKVKAPIDGQVGNLDA-QIGQSIAAGEHIGQIITPD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTAT 349
             ++A++    ++ V  G  A 
Sbjct: 267 LKVQAQIDEHYVERVVPGLPAD 288



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/213 (11%), Positives = 73/213 (34%), Gaps = 17/213 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G+++  + ++ + +   G +++   E G+ +  G  +L   +       +++   +
Sbjct: 62  IRVIGQVMP-NRIIYMDAIEGGRVEERLKEEGAIVKAGDVILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++  ++N R  ++ E   L       +  E A + R  +    L K      + F   
Sbjct: 121 AYQENELRNTRISMEQEHLRLKQERIGLN-KELAVKQRRYEQYSRLIKEQLIAQEEFRLA 179

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                 +          I  +    E++   L   + + ++ L +++         + + 
Sbjct: 180 AEEYEAARAQLEVIDERIRQDNFFRESQVHSLDENIRNMKRSLALVRE--------RVEN 231

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            + +  +      L   I +      HI ++  
Sbjct: 232 LKVKAPIDGQVGNLDAQIGQSIAAGEHIGQIIT 264


>gi|158520824|ref|YP_001528694.1| secretion protein HlyD family protein [Desulfococcus oleovorans
           Hxd3]
 gi|158509650|gb|ABW66617.1| secretion protein HlyD family protein [Desulfococcus oleovorans
           Hxd3]
          Length = 310

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 72/237 (30%), Gaps = 20/237 (8%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            K  L R  L++   ++   +   +       D        Y+   EL +     +  L 
Sbjct: 86  EKLELQRKRLAAGLAEVAANRTAADAAVAQAEDTLANVETQYRRIKELHDRGSATQKQLD 145

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            I      A  + A         L       A   ++L + ++      + SPI GT+V 
Sbjct: 146 DITTQLAVAKNQVAG----ARAQLPMLDAKKAQIEAELALADRQIADGRVTSPINGTVVE 201

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +   +   A     + K+       ++   V  + + ++  G    VR           
Sbjct: 202 -KYMEAGETAMPGSRIYKLA-DLGRFWVHIYVAAEDLGNITIGQKVEVRADAVDT----P 255

Query: 363 FKAIIEKIDPIIS-----QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           F   I    P         Q    +++  Y V + +   A       L+ G P EV 
Sbjct: 256 FSGTIAWTSPEAEFTPKNVQTRKARSELVYAVKVILDTGADV-----LKIGMPVEVY 307



 Score = 43.1 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 56/158 (35%), Gaps = 11/158 (6%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
            SG +   +  V I +   G +     E G +   G  L   +     + ++L++  +  
Sbjct: 44  GSGTLEATE--VVISAQTGGTVTDLSREEGQKAAAGDLLAVID----VEKLELQRKRLAA 97

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
               +   ++A D    + +      E++  ++ +   +  +T  +     +  +   L 
Sbjct: 98  GLAEVAANRTAADAAVAQAEDTLANVETQYRRIKELHDRGSATQKQ-----LDDITTQLA 152

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +   ++         L+ K + + A L+   + +   +
Sbjct: 153 VAKNQVAGARAQLPMLDAKKAQIEAELALADRQIADGR 190


>gi|24113036|ref|NP_707546.1| hypothetical protein SF1671 [Shigella flexneri 2a str. 301]
 gi|30063161|ref|NP_837332.1| hypothetical protein S1803 [Shigella flexneri 2a str. 2457T]
 gi|24052004|gb|AAN43253.1| putative membrane protein [Shigella flexneri 2a str. 301]
 gi|30041410|gb|AAP17139.1| putative membrane protein [Shigella flexneri 2a str. 2457T]
          Length = 288

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 27/220 (12%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S +     +  +   +   +S    +L +     +   V+  +L            EL
Sbjct: 33  MQSPWTRDGKIRAEQVSITPQVSGRIVELNIK----DNQLVNAGELLLTIDKTPFQIAEL 88

Query: 231 RENIHEQKNMLRHINELYDEANLE--------FANYLKEISRDLEQNQRTFADEMSKLTI 282
                +       + +  +EAN          FA  L   + +++  Q +     + L  
Sbjct: 89  NAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIFAEELDTANLNVKAMQASVNAAQATLKQ 147

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQ 338
            +    Q  I +P++G +    +    +YA   +PL  +V       I      K+    
Sbjct: 148 TQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR--- 203

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             H+++G  A +          K  +  +  I   I  Q 
Sbjct: 204 --HIREGAPAQITL----YSDNKTLQGHVSSIGRAIYDQS 237



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 4   MSIKTIKYFSTIIVAIVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 59

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 60  ELNIKDNQLVNAGELLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 119

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 120 FAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 159


>gi|332996183|gb|EGK15810.1| hlyD family secretion family protein [Shigella flexneri VA-6]
          Length = 309

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 94/288 (32%), Gaps = 14/288 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ +   +N   I +G  L   + +     +D  +  +     +I T ++ L       
Sbjct: 3   GIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLTEAQANT 62

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             +    +   +    +L    +  +      I    ++   +   ++     +  ++++
Sbjct: 63  TQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQAQIQSQ 122

Query: 185 SSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
              L ++++  Q  +  ++  L E     +  + +     Y + + +R   +     LR 
Sbjct: 123 ---LDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVLIRPGTYAAALPLRP 179

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +     E   +     ++ S    +         + L       +  +IL      +V  
Sbjct: 180 VMVFIPEQKRQIVAQFRQNSLLRLKPGDDAEVVFNALPGQVFHGKLTSIL-----PVVPG 234

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
            S+ +    Q     + +VP +       ++ P   I  +  G  A V
Sbjct: 235 GSYQAQGVLQS----LTVVPGTDGVLGTIELDPNDDIDALPDGIYAQV 278


>gi|332885584|gb|EGK05830.1| hypothetical protein HMPREF9456_02094 [Dysgonomonas mossii DSM
           22836]
          Length = 408

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 62/208 (29%), Gaps = 16/208 (7%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L   E     + L+ R    + +       +   E         +      +  Q    
Sbjct: 96  RLLASELENANAALQSRLVDLDLQKKNYERQKSLWEKQAISKVDWENAESTYKTAQLAVT 155

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYIR 331
              + +   +      TI S I G +V  ++         S     L  I        + 
Sbjct: 156 SSKAAVLKAQTNLGYATITSTIDGVVVS-RAVEQGQTVAASFSTPTLFTIANDLTKMRVI 214

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
           A V    I  VK+G   +     + +    +F+  + ++    +   N +     Y+V++
Sbjct: 215 ANVDEADIGGVKEGQRVSFTVDAFPED---EFEGKVVQVRLEATTTSNVVT----YQVVI 267

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   + +++L+ G  A V      
Sbjct: 268 DAP-----NPDLKLKPGLTANVNIYTME 290



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 77/212 (36%), Gaps = 18/212 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW---------SILLP-----IEISVSSSGEILNED 54
           +KR     L    +L ++  I  + +          I        + I+V+++G I    
Sbjct: 2   MKRKSKKYLIIGAILLVLCCIAFLIFPQGKKTITTLITAKVEKGNLSIAVTATGTIEPIT 61

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            +VE+ +  SG+I K  V+  S++  G  L   +       ++    ++++    +D +K
Sbjct: 62  -LVEVGTQVSGVISKIYVDYNSEVKAGQVLAELDKRLLASELENANAALQSRLVDLDLQK 120

Query: 115 SALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              +    L  K  + +  +E+ E           S+ + V     +  Y ++   +  +
Sbjct: 121 KNYERQKSLWEKQAISKVDWENAESTYKTAQLAVTSSKAAVLKAQTNLGYATITSTIDGV 180

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                        +S     L +   DLT M+
Sbjct: 181 VVSRAVEQGQTVAASFSTPTLFTIANDLTKMR 212


>gi|319426108|gb|ADV54182.1| efflux transporter, RND family, MFP subunit [Shewanella
           putrefaciens 200]
          Length = 361

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 57/187 (30%), Gaps = 22/187 (11%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT--FADEMSKLTILE 284
            L+  E I + K     + +   E N   +        +LE+++         ++L   +
Sbjct: 92  QLQNAEQIAKVKAAQVKVTDNKRELNRISSLVTSRTVAELERDRLQTLIDTTRAELEQAQ 151

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHV 342
            +   + IL+P  G  +  +  S  +         +I          +   V  + IQ +
Sbjct: 152 VSLNDRRILAPFDGR-LGLRQVSVGSLVTPGT---EITTLDDISKIKLDFSVPERFIQEL 207

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           + G         + D     F  I+  ID  ++                 I      + +
Sbjct: 208 RPGKLVEATAIAFPDET---FNGIVTSIDSRVNPTT-----------RAVIVRAEIPNPD 253

Query: 403 IELRNGF 409
           + L  G 
Sbjct: 254 LRLLPGM 260


>gi|315636148|ref|ZP_07891402.1| secretion protein HlyD [Arcobacter butzleri JV22]
 gi|315479509|gb|EFU70188.1| secretion protein HlyD [Arcobacter butzleri JV22]
          Length = 420

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 74/233 (31%), Gaps = 35/233 (15%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY------------------DE 250
             +++ D  + +  V  ST  L   +  QK     +N                      +
Sbjct: 104 QILAKIDTVKLQSQVDSSTAALAIAVANQKESQVLLNNKKTLYDRTLNMYKNSGGKYPSK 163

Query: 251 ANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
             L+   +  E + + LE  +       S L   ++  E+ ++ S I G ++  +     
Sbjct: 164 NELDDTRFSYEAAIESLEAAKAKVLQAQSNLKTDKQNLEKASVKSSIDGIVLNREV-EVG 222

Query: 310 NYAQQ---SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                   +  L  I        +   +    +  +KK    T     Y +   K F   
Sbjct: 223 QTLAATMSAPKLFTIAKDLTNMDLIVSIDEADVADIKKDLPVTFTVDAYPN---KVFNGK 279

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           ++++  +     N + T   YE ++ +      + ++ L+ G  A      K 
Sbjct: 280 VKQV-RLNPVDTNGVVT---YETVVSVD-----NEDLLLKPGMTATAKIITKE 323



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 68/175 (38%), Gaps = 5/175 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + VS++G +    N VEI    SG +K+  V+   ++  G  L   + ++    +D  
Sbjct: 63  LSVVVSTTGNLNP-TNSVEIGIEVSGTLKEIFVDFNDEVKAGQILAKIDTVKLQSQVD-- 119

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK-VFNYGIS 158
             S   L   +  +K +   LNNK  + ++     +     +  K     ++  +   I 
Sbjct: 120 -SSTAALAIAVANQKESQVLLNNKKTLYDRTLNMYKNSGGKYPSKNELDDTRFSYEAAIE 178

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           S+  +    L    ++  ++ +LE  S           +++ + + L    +  +
Sbjct: 179 SLEAAKAKVLQAQSNLKTDKQNLEKASVKSSIDGIVLNREVEVGQTLAATMSAPK 233


>gi|313648922|gb|EFS13359.1| uncharacterized protein ydhJ [Shigella flexneri 2a str. 2457T]
 gi|332756957|gb|EGJ87300.1| hypothetical protein SF434370_1919 [Shigella flexneri 4343-70]
 gi|332758078|gb|EGJ88403.1| hypothetical protein SF274771_2112 [Shigella flexneri 2747-71]
 gi|332758477|gb|EGJ88798.1| hypothetical protein SFK671_2091 [Shigella flexneri K-671]
 gi|332767047|gb|EGJ97246.1| hlyD secretion family protein [Shigella flexneri 2930-71]
 gi|333003889|gb|EGK23424.1| hypothetical protein SFK218_2547 [Shigella flexneri K-218]
 gi|333018009|gb|EGK37314.1| hypothetical protein SFK304_2294 [Shigella flexneri K-304]
          Length = 285

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 27/220 (12%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S +     +  +   +   +S    +L +     +   V+  +L            EL
Sbjct: 30  MQSPWTRDGKIRAEQVSITPQVSGRIVELNIK----DNQLVNAGELLLTIDKTPFQIAEL 85

Query: 231 RENIHEQKNMLRHINELYDEANLE--------FANYLKEISRDLEQNQRTFADEMSKLTI 282
                +       + +  +EAN          FA  L   + +++  Q +     + L  
Sbjct: 86  NAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIFAEELDTANLNVKAMQASVNAAQATLKQ 144

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQ 338
            +    Q  I +P++G +    +    +YA   +PL  +V       I      K+    
Sbjct: 145 TQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR--- 200

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             H+++G  A +          K  +  +  I   I  Q 
Sbjct: 201 --HIREGAPAQITL----YSDNKTLQGHVSSIGRAIYDQS 234



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAIVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGELLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 117 FAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 156


>gi|302342060|ref|YP_003806589.1| efflux transporter, RND family, MFP subunit [Desulfarculus baarsii
           DSM 2075]
 gi|301638673|gb|ADK83995.1| efflux transporter, RND family, MFP subunit [Desulfarculus baarsii
           DSM 2075]
          Length = 378

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 82/267 (30%), Gaps = 25/267 (9%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +  + R +    + MRS    R+D  +    L     +  K   ++  L +   ++ 
Sbjct: 47  ARQVEDILRQVGTLDSAMRSTMRARVD--SSVVHLSFQEGARVKKGDVLVRLDDAKILAA 104

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            D  Q         L  ++   E+   L   + +         +   +    + Q +   
Sbjct: 105 IDNLQAGIKQLGVKLAFQQKTLERNRQLLKRSAIAQHQFDSLESDFHQTELAITQAKADL 164

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A +               I +P  G +V  ++ +  +Y +    ++ +V       +   
Sbjct: 165 ARQRE-------MLADTVISAPFDG-VVGARTIAVGDYLKTGDKVVTVVGLD-PLEVGFN 215

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V  +    +  G+   V+     D     F   I  I PI+     +      ++V  ++
Sbjct: 216 VPERYKPKLALGHKVHVQVAAEGDR---LFDGEIFFIAPIVDPATRS------FQVKARV 266

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
                 + +  L  G  A V   A   
Sbjct: 267 -----GNRDGRLNPGMFANVRLVADVR 288



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 43/124 (34%), Gaps = 10/124 (8%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN---- 122
           +     + G+++ +G  L+  +D +    ID  +  IK L   +  ++  L+        
Sbjct: 76  VVHLSFQEGARVKKGDVLVRLDDAKILAAIDNLQAGIKQLGVKLAFQQKTLERNRQLLKR 135

Query: 123 ------KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
                 ++D LE  F   E  +             + +  IS+ +  +    T     YL
Sbjct: 136 SAIAQHQFDSLESDFHQTELAITQAKADLARQREMLADTVISAPFDGVVGARTIAVGDYL 195

Query: 177 NRLD 180
              D
Sbjct: 196 KTGD 199


>gi|255656383|ref|ZP_05401792.1| putative lipoprotein [Clostridium difficile QCD-23m63]
          Length = 407

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/355 (13%), Positives = 109/355 (30%), Gaps = 92/355 (25%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V+ G  + +G  LL+    +        + S+K  +  +D  K++        
Sbjct: 67  GTVQEVYVKLGQNVRKGDELLSISSPD-------LENSVKQSKAALDLAKASYSSTTGG- 118

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                                                 SL+ ++ + ++   N       
Sbjct: 119 --------------------------------------SLEAQVNQAKTALDN------- 133

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               +      Q++    K L+E+  +S +   + E  + +S  +L         +    
Sbjct: 134 ---AKIQYDESQRNYDNNKILYEQEVISLDQFKKIEFALEQSKQQLDSAQRSYDTVTSK- 189

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                              + L+Q Q +         +     ++ T+ +P+ GTI   +
Sbjct: 190 ---------SIPQAKALAKKQLDQAQVS-------YNLAMSNLDKLTLTAPVDGTITA-K 232

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           +F +     QSQP   I+ +  +  +   V    I   KK     V           K  
Sbjct: 233 NFDAKEMITQSQP-AFIISNPNILEVNLNVAESDIDKFKKDGNVEVIIE--DQRILGKID 289

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +   +DP  S           Y + + +     ++ N + + G  A+V  + + 
Sbjct: 290 YVPSVVDPQTSL----------YPIKVLV-----NNTNNKFKAGMSAQVNLSVEK 329


>gi|168466524|ref|ZP_02700386.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|195630948|gb|EDX49534.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
          Length = 372

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  L      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATELAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKINDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 66/174 (37%), Gaps = 17/174 (9%)

Query: 18  KRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+  W +L                +E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMAGWRMLNAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G  + +   L   +  +  + I   + ++  L    + +++A +    +
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNA--ERQQAAAELKLAR 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +   ++ + +        +T   V    I ++   +K     + +   N
Sbjct: 128 VTLARQQQLAKTQAVSQQDLDTAATELAVKQARIGTIDAQIKRNRASLDTAKTN 181


>gi|149642659|ref|NP_001092569.1| keratin 31 [Bos taurus]
 gi|148744885|gb|AAI42132.1| KRT33A protein [Bos taurus]
 gi|296476363|gb|DAA18478.1| keratin 31 [Bos taurus]
          Length = 401

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 86/215 (40%), Gaps = 11/215 (5%)

Query: 83  PLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            ++  ++ +  +D    K  +  +LR  ++ + + L  + ++  + +   E+R E L + 
Sbjct: 127 LVVQIDNAKLASDDFRTKYETEVSLRQLVEADLNGLRRILDELTLCKSDLEARVESLKEE 186

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT- 200
           L        +  N   S +   L +++    ++ LNR+ L    +   AL+ ++++D+  
Sbjct: 187 LICLKQNHEQEVNTLRSQLGDRLNVEVDAAPTVDLNRV-LNETRAQYEALVETNRRDVEE 245

Query: 201 ----MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                 + L ++   S   L   +  +    +ELR  ++  +  L+  + L D       
Sbjct: 246 WYIRQTEELNKQVVSSSEQLQSYQAEI----IELRRTVNALEVELQAQHNLRDSLENTLT 301

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 S  L Q Q    +  S+L  +    E++ 
Sbjct: 302 ETEARYSCQLAQVQGLIGNVESQLAEIRSDLERQN 336


>gi|17986642|ref|NP_539276.1| periplasmic component of efflux system [Brucella melitensis bv. 1
           str. 16M]
 gi|62290545|ref|YP_222338.1| HlyD family secretion protein [Brucella abortus bv. 1 str. 9-941]
 gi|82700461|ref|YP_415035.1| secretion protein HlyD [Brucella melitensis biovar Abortus 2308]
 gi|189024767|ref|YP_001935535.1| Secretion protein HlyD [Brucella abortus S19]
 gi|225853134|ref|YP_002733367.1| RND family efflux transporter [Brucella melitensis ATCC 23457]
 gi|237816051|ref|ZP_04595047.1| efflux transporter, RND family, MFP subunit [Brucella abortus str.
           2308 A]
 gi|254689844|ref|ZP_05153098.1| efflux transporter, RND family, MFP subunit [Brucella abortus bv. 6
           str. 870]
 gi|254694336|ref|ZP_05156164.1| efflux transporter, RND family, MFP subunit [Brucella abortus bv. 3
           str. Tulya]
 gi|254697992|ref|ZP_05159820.1| efflux transporter, RND family, MFP subunit [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254708458|ref|ZP_05170286.1| efflux transporter, RND family, MFP subunit [Brucella pinnipedialis
           M163/99/10]
 gi|254730878|ref|ZP_05189456.1| efflux transporter, RND family, MFP subunit [Brucella abortus bv. 4
           str. 292]
 gi|256045285|ref|ZP_05448179.1| efflux transporter, RND family, MFP subunit [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256114244|ref|ZP_05454989.1| efflux transporter, RND family, MFP subunit [Brucella melitensis
           bv. 3 str. Ether]
 gi|256160389|ref|ZP_05458079.1| efflux transporter, RND family, MFP subunit [Brucella ceti
           M490/95/1]
 gi|256255597|ref|ZP_05461133.1| efflux transporter, RND family, MFP subunit [Brucella ceti B1/94]
 gi|256258097|ref|ZP_05463633.1| efflux transporter, RND family, MFP subunit [Brucella abortus bv. 9
           str. C68]
 gi|256263378|ref|ZP_05465910.1| secretion protein HlyD [Brucella melitensis bv. 2 str. 63/9]
 gi|260547207|ref|ZP_05822945.1| secretion protein HlyD [Brucella abortus NCTC 8038]
 gi|260565822|ref|ZP_05836305.1| secretion protein HlyD [Brucella melitensis bv. 1 str. 16M]
 gi|260755376|ref|ZP_05867724.1| efflux transporter [Brucella abortus bv. 6 str. 870]
 gi|260758597|ref|ZP_05870945.1| efflux transporter [Brucella abortus bv. 4 str. 292]
 gi|260762429|ref|ZP_05874766.1| efflux transporter [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884392|ref|ZP_05896006.1| efflux transporter [Brucella abortus bv. 9 str. C68]
 gi|261214643|ref|ZP_05928924.1| efflux transporter [Brucella abortus bv. 3 str. Tulya]
 gi|261222802|ref|ZP_05937083.1| efflux transporter [Brucella ceti B1/94]
 gi|261315956|ref|ZP_05955153.1| efflux transporter [Brucella pinnipedialis M163/99/10]
 gi|265991712|ref|ZP_06104269.1| efflux transporter [Brucella melitensis bv. 1 str. Rev.1]
 gi|265995549|ref|ZP_06108106.1| efflux transporter [Brucella melitensis bv. 3 str. Ether]
 gi|265998760|ref|ZP_06111317.1| efflux transporter [Brucella ceti M490/95/1]
 gi|297248947|ref|ZP_06932655.1| HlyD family secretion protein [Brucella abortus bv. 5 str. B3196]
 gi|17982258|gb|AAL51540.1| macrolide-specific efflux protein maca [Brucella melitensis bv. 1
           str. 16M]
 gi|62196677|gb|AAX74977.1| HlyD family secretion protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616562|emb|CAJ11641.1| Secretion protein HlyD [Brucella melitensis biovar Abortus 2308]
 gi|189020339|gb|ACD73061.1| Secretion protein HlyD [Brucella abortus S19]
 gi|225641499|gb|ACO01413.1| efflux transporter, RND family, MFP subunit [Brucella melitensis
           ATCC 23457]
 gi|237788714|gb|EEP62926.1| efflux transporter, RND family, MFP subunit [Brucella abortus str.
           2308 A]
 gi|260095572|gb|EEW79450.1| secretion protein HlyD [Brucella abortus NCTC 8038]
 gi|260151195|gb|EEW86290.1| secretion protein HlyD [Brucella melitensis bv. 1 str. 16M]
 gi|260668915|gb|EEX55855.1| efflux transporter [Brucella abortus bv. 4 str. 292]
 gi|260672855|gb|EEX59676.1| efflux transporter [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675484|gb|EEX62305.1| efflux transporter [Brucella abortus bv. 6 str. 870]
 gi|260873920|gb|EEX80989.1| efflux transporter [Brucella abortus bv. 9 str. C68]
 gi|260916250|gb|EEX83111.1| efflux transporter [Brucella abortus bv. 3 str. Tulya]
 gi|260921386|gb|EEX88039.1| efflux transporter [Brucella ceti B1/94]
 gi|261304982|gb|EEY08479.1| efflux transporter [Brucella pinnipedialis M163/99/10]
 gi|262553449|gb|EEZ09218.1| efflux transporter [Brucella ceti M490/95/1]
 gi|262766833|gb|EEZ12451.1| efflux transporter [Brucella melitensis bv. 3 str. Ether]
 gi|263002668|gb|EEZ15071.1| efflux transporter [Brucella melitensis bv. 1 str. Rev.1]
 gi|263093375|gb|EEZ17444.1| secretion protein HlyD [Brucella melitensis bv. 2 str. 63/9]
 gi|297174080|gb|EFH33437.1| HlyD family secretion protein [Brucella abortus bv. 5 str. B3196]
 gi|326409686|gb|ADZ66751.1| Secretion protein HlyD [Brucella melitensis M28]
 gi|326539393|gb|ADZ87608.1| efflux transporter, RND family, MFP subunit [Brucella melitensis
           M5-90]
          Length = 408

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 15/210 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q D  + + +   + L L++    ++  L     +      +    L     +++    
Sbjct: 127 AQLDNLKAQLLSKDAQLTLKKLNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNA 186

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
               + ++L   +      +I SP+ GT+V   +          Q    IV  + L    
Sbjct: 187 QIRQQEAQLASDKVDLGYTSIYSPMEGTVVDEAA-KEGETLNAVQSAPTIVTVADLKVMT 245

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A+V+   I  +K G      F        K+F   + +I P  +  +N +    YY +
Sbjct: 246 VEAQVSEADISKLKPGMPVY--FTLLGQPD-KRFTGTLRQIKPTPATDNNVVL---YYAL 299

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                     +   EL     A+V F    
Sbjct: 300 F------DVPNPTGELMIDMSAQVYFVLGE 323



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 68/193 (35%), Gaps = 29/193 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW-------------SILLP------IEISVSSS 47
            + ++      +    LS   II    W             S L        IE ++++ 
Sbjct: 15  ASARKRAKGKRRWWLWLSAAAIIIGAGWYFYGSYKADGEKSSYLAETVTRGDIENAITAV 74

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G + +    V + +  SG +K  +VE G  + QG  +   +       +++    + NL+
Sbjct: 75  GTL-SALRSVNVGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIAGAQLDNLK 133

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             + ++ + L         L+K   +R++ LL   G   +T  +  N  +      +K  
Sbjct: 134 AQLLSKDAQL--------TLKKLNAARQKSLLATRGVSQATVDQA-NADLLMAEAEVKAL 184

Query: 168 LTRMRSIYLNRLD 180
             ++R        
Sbjct: 185 NAQIRQQEAQLAS 197


>gi|323700497|ref|ZP_08112409.1| efflux transporter, RND family, MFP subunit [Desulfovibrio sp.
           ND132]
 gi|323460429|gb|EGB16294.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           desulfuricans ND132]
          Length = 414

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 4/154 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +    +V EIKS   GII K  V+NG  +  G  L   +       I   +  +  
Sbjct: 69  AVGNVTPLASV-EIKSRVGGIIVKQLVQNGQDVEAGDLLFQVDPRSFDLAIKEAQARLDR 127

Query: 106 LRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            R H++  K  L     L     V ++++++   +            + +    +   Y 
Sbjct: 128 DRAHLNKAKEDLRRYSKLRELNVVAQESYDNTFAEATSLENTIRLNEAALEQARLDRDYA 187

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +++  ++    I    +    K++  R L   +Q
Sbjct: 188 AIRAPISGRVGIVQVNVGNVIKANDDRTLCVINQ 221



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 44/150 (29%), Gaps = 18/150 (12%)

Query: 201 MMKNLFEKNA-VSQNDLNQQE--RIVYKSTLELRENIHEQKNMLRHINE------LYDEA 251
           ++K L +    V   DL  Q   R    +  E +  +   +  L    E         E 
Sbjct: 89  IVKQLVQNGQDVEAGDLLFQVDPRSFDLAIKEAQARLDRDRAHLNKAKEDLRRYSKLREL 148

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           N+           +    + T     + L      R+   I +PI+G +   Q     N 
Sbjct: 149 NVVAQESYDNTFAEATSLENTIRLNEAALEQARLDRDYAAIRAPISGRVGIVQVN-VGNV 207

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
            + +          +   +  ++ P  +  
Sbjct: 208 IKAND--------DRTLCVINQIRPINVSF 229


>gi|254700336|ref|ZP_05162164.1| efflux transporter, RND family, MFP subunit [Brucella suis bv. 5
           str. 513]
 gi|261750832|ref|ZP_05994541.1| efflux transporter [Brucella suis bv. 5 str. 513]
 gi|261740585|gb|EEY28511.1| efflux transporter [Brucella suis bv. 5 str. 513]
          Length = 381

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 15/210 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q D  + + +   + L L++    ++  L     +      +    L     +++    
Sbjct: 100 AQLDNLKAQLLSKDAQLTLKKLNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNA 159

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
               + ++L   +      +I SP+ GT+V   +          Q    IV  + L    
Sbjct: 160 QIRQQEAQLASDKVDLGYTSIYSPMEGTVVDEAA-KEGETLNAVQSAPTIVTVADLKVMT 218

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A+V+   I  +K G      F        K+F   + +I P  +  +N +    YY +
Sbjct: 219 VEAQVSEADISKLKPGMPVY--FTLLGQPD-KRFTGTLRQIKPTPATDNNVVL---YYAL 272

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                     +   EL     A+V F    
Sbjct: 273 F------DVPNPTGELMIDMSAQVYFVLGE 296



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 10/141 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE ++++ G + +    V + +  SG +K  +VE G  + QG  +   +       +++ 
Sbjct: 40  IENAITAVGTL-SALRSVNVGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIA 98

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + NL+  + ++ + L         L+K   +R++ LL   G   +T  +  N  +  
Sbjct: 99  GAQLDNLKAQLLSKDAQL--------TLKKLNAARQKSLLATRGVSQATVDQA-NADLLM 149

Query: 160 VYRSLKMKLTRMRSIYLNRLD 180
               +K    ++R        
Sbjct: 150 AEAEVKALNAQIRQQEAQLAS 170


>gi|268590288|ref|ZP_06124509.1| HtpX protein [Providencia rettgeri DSM 1131]
 gi|291314196|gb|EFE54649.1| HtpX protein [Providencia rettgeri DSM 1131]
          Length = 331

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 89/266 (33%), Gaps = 34/266 (12%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD--LTMMKNLFEKNAVSQND 215
             V  S K +L    S Y  +   + ++ L +   +    D      + L     +S ND
Sbjct: 89  KGVRDSAKAQLALKESGYRTQEVAQVEAELAQKQAAWQYADNFYKRQQGLAASRVISAND 148

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L+  +              + +      +    D+ N   + + +E   ++   +  +  
Sbjct: 149 LDNAK--------------NNRNQAFAALQAAQDKLNQYQSGFRQE---EIAAARGEWLQ 191

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             + +   E   +   + +P +GTI+  ++            +  +   +   ++RA V+
Sbjct: 192 AEAAVAQAELDLQDTVLTAPSSGTILT-RAIEPGTIIGAGNTVFSVT-LTNPVWVRAYVS 249

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVI 390
              +     G    +   +      + +   I  + P       S Q  +L+T   Y + 
Sbjct: 250 EPHLGDAIPGREVLL---YTDSRPNQPYHGTIGFVSPTAEFTPKSVQTPDLRTDLVYRLR 306

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFT 416
           + + D   +     LR G P  + FT
Sbjct: 307 IVVNDADDA-----LRQGMPVTIQFT 327


>gi|213423363|ref|ZP_03356352.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 333

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  L      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATELAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKINDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 68/174 (39%), Gaps = 17/174 (9%)

Query: 18  KRMTLLSIIGIIGLITW-SILLPI-------------EISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+++W  I  P+             E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMVSWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G  + +   L   +  +  + I   + ++  L    + +++A +    +
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNA--ERQQAAAELKLAR 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +   ++ + +        +T   V    I ++   +K     + +   N
Sbjct: 128 VTLARQQQLAKTQAVSQQDLDTAATELAVKQARIGTIDAQIKRNRASLDTAKTN 181


>gi|254442586|ref|ZP_05056062.1| efflux transporter, RND family, MFP subunit, putative
           [Verrucomicrobiae bacterium DG1235]
 gi|198256894|gb|EDY81202.1| efflux transporter, RND family, MFP subunit, putative
           [Verrucomicrobiae bacterium DG1235]
          Length = 589

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 61/170 (35%), Gaps = 21/170 (12%)

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK---TREQKTILSPIAGTI 300
           +    +       +     +R   +  R +     ++  L K    ++   + +PI G +
Sbjct: 166 LAAQSELLTAHRYDPQSSATRAAREKLRLWDLLPEQIDSLIKNGVAQDHFELKAPINGIV 225

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKL-TYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           V        +Y +  QPL KIV   +L   + A  +   +  +K G T T          
Sbjct: 226 VSKNVN-EGDYLKTGQPLFKIVDLDQLWLRLDAFES--DLPWLKFGQTVTFSVEAIPGQT 282

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              F+ II  IDP + ++   +       V + +      + + +L+ G 
Sbjct: 283 ---FQGIIAFIDPELDRKTRTVA------VRINVP-----NTDRKLKPGM 318


>gi|149174754|ref|ZP_01853379.1| hypothetical protein PM8797T_26500 [Planctomyces maris DSM 8797]
 gi|148846448|gb|EDL60786.1| hypothetical protein PM8797T_26500 [Planctomyces maris DSM 8797]
          Length = 675

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 8/164 (4%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           TL+ I  I+       L+P +  VS  G ++         +    ++    V++G ++ +
Sbjct: 386 TLVVIALIVAAGVALALVPYDYRVSCDGRLMPMVQREVFTNWEGEVVA-IHVQSGQRVKK 444

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR------ 134
           G  L+   + +    +   +  +  LR    T  + L   NN    +++  + R      
Sbjct: 445 GELLVEIRNEDLKAQLLETENKLNELRLMRLTLNAQLQSGNNNKRPVDEITKLRGQLNET 504

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           E Q+   L +      ++    + +    +     ++  + +NR
Sbjct: 505 ETQISGVLKQLEILRDRLDKLNVKAPIDGVVTTF-QIEQLLINR 547



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/247 (12%), Positives = 79/247 (31%), Gaps = 31/247 (12%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA---------NYLKEI 262
           S   + + E +V     +L+  + E +N L  +  +    N +           + + ++
Sbjct: 438 SGQRVKKGELLVEIRNEDLKAQLLETENKLNELRLMRLTLNAQLQSGNNNKRPVDEITKL 497

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS--SSNYAQQSQPLMK 320
              L + +   +  + +L IL    ++  + +PI G +   Q      +   Q+ + L++
Sbjct: 498 RGQLNETETQISGVLKQLEILRDRLDKLNVKAPIDGVVTTFQIEQLLINRPVQRGELLLE 557

Query: 321 IVPHSKLTYIRAKVTPKQIQHV--------KKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           I+  +    +   V  K++ H+          G           ++     +  + +   
Sbjct: 558 IMDPNGPWQLELDVEEKRMGHILRATERKGDIGLPVEFILATSNELSY---EGEVTEFST 614

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN-GFPAEVLFTAKNTTLAQEIIHPIT 431
             +  + N    E Y          F    + L   G            +L   +   + 
Sbjct: 615 RTNSSEENGSIVETY--------ATFDKEKLPLLRIGAEVSAKIDCGERSLFYVLFGDVV 666

Query: 432 DNWPKIF 438
           +   + F
Sbjct: 667 ETCRRYF 673


>gi|83644074|ref|YP_432509.1| membrane-fusion protein [Hahella chejuensis KCTC 2396]
 gi|83632117|gb|ABC28084.1| Membrane-fusion protein [Hahella chejuensis KCTC 2396]
          Length = 392

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 49/138 (35%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     V  + +  +G +K   V  G ++ +G  L   + +   + ++  
Sbjct: 47  IEETVLATGVLEGSKQV-AVGAQVTGQLKSMNVSVGDRVTKGQLLAEIDPVLQRNDLNRA 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              +KN +      ++ L +   ++    +        + +         S      I +
Sbjct: 106 MAELKNAKASRRAREAMLRYYELEFKRQREMNAQAAASVSELENARAQLESA--KAEIEA 163

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +     ++ +   N
Sbjct: 164 LEAQISQAEIQVETAKAN 181



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 97/302 (32%), Gaps = 34/302 (11%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           +     K D+ E    +   +    +        ++ +  +S   R  K +L       L
Sbjct: 38  ITAPVEKRDIEETVLATGVLEGSKQVAVGAQVTGQLKSMNVSVGDRVTKGQLLAEIDPVL 97

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            R DL    + L+   +S +    M++  +E     Q ++N Q      S  EL     +
Sbjct: 98  QRNDLNRAMAELKNAKASRRAREAMLRY-YELEFKRQREMNAQ---AAASVSELENARAQ 153

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            ++    I  L                      +   +    ++   +       I++P+
Sbjct: 154 LESAKAEIEAL----------------------EAQISQAEIQVETAKANLGFTKIVAPM 191

Query: 297 AGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            G ++  +           + P + I+ +     ++A+++   +  VK G  A       
Sbjct: 192 DGVVIATKFEQGQTLVSTQEAPTLLILANLDTMTVKAQISEADVTKVKSGQEANFTVLGD 251

Query: 356 ADIREKKFKAIIEKIDPIISQQD--NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            D +       I+     IS     +N  T  YY  +L+       + +  LR    A+V
Sbjct: 252 PDRQYNGILRTIKLAPDNISDNGSVSNSTTAVYYSGVLEAP-----NPDYSLRVAMTAQV 306

Query: 414 LF 415
             
Sbjct: 307 SI 308


>gi|148546429|ref|YP_001266531.1| secretion protein HlyD family protein [Pseudomonas putida F1]
 gi|148510487|gb|ABQ77347.1| secretion protein HlyD family protein [Pseudomonas putida F1]
          Length = 289

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 62/200 (31%), Gaps = 44/200 (22%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E I  +      IN                        +    +  ++L +      +  
Sbjct: 113 EAISAELRENAQINAAI--------------------ARGELHEAEAQLQVARINLARSE 152

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P +G I   +  +  NY    + +M +V      YI+A     ++  ++ G T  V 
Sbjct: 153 VRAPRSGHITNLRL-AEGNYVNTGESVMALV-DDSTFYIQAYFEETKLPRIRVGDTVKVW 210

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ---------------EYYEVILKITDL 396
                    +  +  +E I   I+ +++N  +Q               +   V +++  +
Sbjct: 211 L----MGTGEPMQGHVESISRGITDRNSNPDSQLLPEVEPTFNWVRLAQRIPVRIRLDQV 266

Query: 397 AFSDNNIELRNGFPAEVLFT 416
                 + L  G  A V   
Sbjct: 267 ---PEGLTLSAGMTASVQVH 283



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 42/117 (35%), Gaps = 2/117 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV--SIKNLRCH 109
              +VV I    SG +++ +V +  Q+  G  L++ +       +D        +  +  
Sbjct: 39  VRADVVVIAPDVSGWVRELKVHDNQQVKAGDLLMSIDRERFQAALDQASAVTETRAQQLR 98

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +   ++A         +  +  E+ +       G+ H   +++    I+     ++ 
Sbjct: 99  LREREAARRTALGPEAISAELRENAQINAAIARGELHEAEAQLQVARINLARSEVRA 155


>gi|315618371|gb|EFU98958.1| hlyD family secretion family protein [Escherichia coli 3431]
          Length = 369

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 90  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 149

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 150 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 191

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 192 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 250

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 251 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 292



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 57  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 116

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 117 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 176

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 177 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 206


>gi|312881084|ref|ZP_07740884.1| efflux transporter, RND family, MFP subunit [Aminomonas paucivorans
           DSM 12260]
 gi|310784375|gb|EFQ24773.1| efflux transporter, RND family, MFP subunit [Aminomonas paucivorans
           DSM 12260]
          Length = 388

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 69/204 (33%), Gaps = 17/204 (8%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R     + +       +      +++ L E+       +   + ++   + E   N+   
Sbjct: 68  RRSYYGQVAASATQEVTAVLRERILRVLVEEG----QRVRAGQPLLVLESTEQAANLGAD 123

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +  +      Y  A + F         D+++       E +KL     T  Q T+ + + 
Sbjct: 124 RAAVEEARRDYRRAKVLFQEGGLS-RADVDKAYVRLRAEEAKLAASRSTLGQTTVRAAVD 182

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV--TPKQIQHVKKGYTATVRFPHY 355
           G +V  +       A+  + L+ ++     + + A++     ++  V+ G         +
Sbjct: 183 G-VVAVRDAEPGEVAEPGKLLLSVL---DPSRLEAQIPLPSSELGQVRPGTEV-----AF 233

Query: 356 ADIREKKFKAIIEKIDPIISQQDN 379
           + +  +     +++++P       
Sbjct: 234 S-LEGRTLNGRVKRVNPKADPATG 256



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 50/157 (31%), Gaps = 7/157 (4%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR--- 107
           +      E+ +     I +  VE G ++  G PLL  E  E    +   + +++  R   
Sbjct: 75  VAASATQEVTAVLRERILRVLVEEGQRVRAGQPLLVLESTEQAANLGADRAAVEEARRDY 134

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                            D       + E +L         T  +    G+ +V  +   +
Sbjct: 135 RRAKVLFQEGGLSRADVDKAYVRLRAEEAKLAASRSTLGQTTVRAAVDGVVAVRDAEPGE 194

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           +     + L+ LD     S L A +     +L  ++ 
Sbjct: 195 VAEPGKLLLSVLD----PSRLEAQIPLPSSELGQVRP 227


>gi|316932939|ref|YP_004107921.1| RND family efflux transporter MFP subunit [Rhodopseudomonas
           palustris DX-1]
 gi|315600653|gb|ADU43188.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
           palustris DX-1]
          Length = 397

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 53/173 (30%), Gaps = 20/173 (11%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + EL  +   + A         ++  Q  F    + +   E    QKT+ +P  G
Sbjct: 137 RAQAKVAELSLDRAKQLAARQFGPQATVDSAQAAFDQANAGIAKTEALISQKTVRAPFDG 196

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYA 356
            ++  +      Y        +IV  + L+ +     VT K    +  G    V    Y 
Sbjct: 197 -VLGVRQVEVGQYLSAGT---QIVSLTDLSQVYDNFTVTEKDSGTLAVGQAVRVTVDAYP 252

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                 F   I  I+P IS    N++ Q               +    LR G 
Sbjct: 253 GR---VFDGKITTIEPQISTDTRNIRVQ-----------ATLVNPGRVLRPGM 291



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 41/128 (32%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S  SG I     + GS++ QGTPL+   D      +   +   K     +D  K    
Sbjct: 96  VTSDVSGRITDILFQAGSEVKQGTPLVKLFDETELADLANFRAQAKVAELSLDRAKQLAA 155

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   ++ A  + ++              K        V    ++++ +  S     
Sbjct: 156 RQFGPQATVDSAQAAFDQANAGIAKTEALISQKTVRAPFDGVLGVRQVEVGQYLSAGTQI 215

Query: 179 LDLENKSS 186
           + L + S 
Sbjct: 216 VSLTDLSQ 223


>gi|256841397|ref|ZP_05546904.1| ABC transporter permease [Parabacteroides sp. D13]
 gi|256737240|gb|EEU50567.1| ABC transporter permease [Parabacteroides sp. D13]
          Length = 443

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 60/407 (14%), Positives = 119/407 (29%), Gaps = 107/407 (26%)

Query: 20  MTLLSIIGIIGLITWS------ILLPIEISVS-----SSGEILNEDNVVEIKSPFSGIIK 68
           + ++ I G+IG +  S      +   ++  V      +SG+++       I SP +  I 
Sbjct: 56  IAVVLIGGVIGFMQTSLQRKDLVFSTVDKGVIEVSVSASGKVVPAFE-EIINSPINSRIV 114

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +   + G  +  GTP+L  + +        +    +  R  +D  +              
Sbjct: 115 EIYKKGGDSVDVGTPILKLDLLSAETDYKKQLDEEQMKRLQLDQLR-------------- 160

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                            ++          + ++R++L  K   L
Sbjct: 161 --------------------------------IQNRNKLSEMEMQLKVSRMELNRKEVEL 188

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R             + L    A + + + Q E     S L+L+E+  + +N     +  Y
Sbjct: 189 RNE-----------RYLDSLGAGTTDKVRQVELDYNVSVLKLKEDEQKYENEKSLTDADY 237

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
               L+   + K     L + +RT  D                I SP    + Y      
Sbjct: 238 KVKELDLNIFRK----SLAETKRTLED--------------AQIRSPRKAILTYVN-NEV 278

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                Q   +  IV       I  ++       +  G  A V+          K   ++ 
Sbjct: 279 GAQVSQGSRVA-IVSDLSHFKIEGEIADTYGDRIAAGSKAVVKI------GNDKLDGVVS 331

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + P+                ++  T     DN+  LR+G   +V  
Sbjct: 332 DVTPLSKNG------------VISFTVQLEEDNHRRLRSGLKTDVYV 366


>gi|256829951|ref|YP_003158679.1| secretion protein HlyD family protein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579127|gb|ACU90263.1| secretion protein HlyD family protein [Desulfomicrobium baculatum
           DSM 4028]
          Length = 467

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 85/229 (37%), Gaps = 10/229 (4%)

Query: 20  MTLLSIIGIIGLITWSIL---LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           + + +++   GL+ W +L    P E  +SS+G I   +  +++ S FSG ++   V +G 
Sbjct: 122 LGIAAVLVAAGLVAWQMLRPKGPGEGFISSNGRIEATE--IDVSSKFSGRVQDILVADGD 179

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G  L   +        D  +   +     + + ++ +    +    L+     R  
Sbjct: 180 FVTAGQTLAHMQVQTLEAQRDEAQARYQQSLTLVASAEAQVAVRESDRHALQALVAQRMS 239

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +L     +     S+      +S  + L     R+RS+    +  + +    ++ + + +
Sbjct: 240 ELDAAQRRL--ARSETLAGEGASSDQELDDDRARVRSVQAAVVAAKAQVQAAQSAIMAAR 297

Query: 197 KDLTMMKNLFEKNAVSQNDL---NQQERIVYKSTLELRENIHEQKNMLR 242
             +   ++  +    + + +        +V      ++  I +   +L 
Sbjct: 298 AQVAGARSTVDAAQATIDRIKVDIDDSALVAPRDGRVQYRIAQPGEVLA 346


>gi|150006082|ref|YP_001300826.1| multidrug resistance protein MexA [Bacteroides vulgatus ATCC 8482]
 gi|149934506|gb|ABR41204.1| multidrug resistance protein MexA [Bacteroides vulgatus ATCC 8482]
          Length = 383

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 71/191 (37%), Gaps = 15/191 (7%)

Query: 55  NVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +V  I+         G +++  V+ G ++ +G PL      + ++ +   + + K  +  
Sbjct: 54  DVQAIQFVEIKPKVEGFVQQIYVDEGQKVKKGQPLFQLSSDQYSETVKEAQANYKQAQAQ 113

Query: 110 IDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            +    E   +  L +K  + +   +   ++      K     +++    +   Y ++  
Sbjct: 114 YEMANYEAERIGRLVDKQILSKIRLDQANKEKEVAQMKVEQAKAQMQRSQMDYSYTTITA 173

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                   Y++R+  +  S +    L +   D++    +F    V++++  + +R     
Sbjct: 174 PFDG----YIDRIPYKTGSLVNPQSLLTTVSDIS---EIFAYYKVNESEYLEYKRQQLSG 226

Query: 227 TLELRENIHEQ 237
             +  EN  E 
Sbjct: 227 QKQHEENNVEL 237



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 41/134 (30%), Gaps = 21/134 (15%)

Query: 208 KNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +  V Q  +++ +++     L +L  + + +       N    +A  E ANY  E    L
Sbjct: 68  EGFVQQIYVDEGQKVKKGQPLFQLSSDQYSETVKEAQANYKQAQAQYEMANYEAERIGRL 127

Query: 267 EQ------------------NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                                Q       +++   +      TI +P  G I      + 
Sbjct: 128 VDKQILSKIRLDQANKEKEVAQMKVEQAKAQMQRSQMDYSYTTITAPFDGYIDRIPYKT- 186

Query: 309 SNYAQQSQPLMKIV 322
            +     Q L+  V
Sbjct: 187 GSLVNP-QSLLTTV 199


>gi|148360953|ref|YP_001252160.1| multidrug resistance efflux pump PmrA [Legionella pneumophila str.
           Corby]
 gi|296105981|ref|YP_003617681.1| multidrug resistance efflux pump PmrA [Legionella pneumophila
           2300/99 Alcoy]
 gi|148282726|gb|ABQ56814.1| multidrug resistance efflux pump PmrA [Legionella pneumophila str.
           Corby]
 gi|295647882|gb|ADG23729.1| multidrug resistance efflux pump PmrA [Legionella pneumophila
           2300/99 Alcoy]
          Length = 345

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 74/205 (36%), Gaps = 6/205 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              + +TL ++I  IG +T +I+      +  +      +NV  + +  SG I +  V+N
Sbjct: 19  KPKRWLTLTNVIIFIGFLT-AIIYVFSYLIPFTDNAFVVNNVRPVAALTSGYITELYVKN 77

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L T         ++     +   +  +   K+  +      +  +K ++  
Sbjct: 78  GDAVRKGQKLFTVFKKPYEYTVEQLSADLAGAQAKLAVLKATYERDLKLSENEQKIYKKL 137

Query: 135 EEQLLDFLGKYHSTCSKVF-----NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            +    +L  Y      +           +     +  L ++          EN+   ++
Sbjct: 138 AQDDQKYLKGYAIKSVSLITLQNSQQETKAAKDKWQASLKQLEIDQHQITVQENEIKSIQ 197

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQN 214
           A L + + +L +     + N V QN
Sbjct: 198 ARLKNAKVNLDLTDVYAQGNGVIQN 222



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 59/180 (32%), Gaps = 10/180 (5%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +  +  +    + K ++L+A      K     + +++K A       +   I   S + L
Sbjct: 99  VEQLSADLAGAQAKLAVLKATYERDLKLSENEQKIYKKLAQDDQKYLKGYAIKSVSLITL 158

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           + +  E K           +  ++           +   +       ++L   +   +  
Sbjct: 159 QNSQQETKAAKDKWQASLKQLEID--------QHQITVQENEIKSIQARLKNAKVNLDLT 210

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +   G I     F+       +QPL  +V      YI+A      ++ V+KG    +
Sbjct: 211 DVYAQGNGVIQNL-FFTIGTPVNINQPLFSLV-DQDNIYIQANFNETDLRDVRKGSKVLI 268


>gi|113970673|ref|YP_734466.1| RND family efflux transporter MFP subunit [Shewanella sp. MR-4]
 gi|114047902|ref|YP_738452.1| RND family efflux transporter MFP subunit [Shewanella sp. MR-7]
 gi|113885357|gb|ABI39409.1| efflux transporter, RND family, MFP subunit [Shewanella sp. MR-4]
 gi|113889344|gb|ABI43395.1| efflux transporter, RND family, MFP subunit [Shewanella sp. MR-7]
          Length = 360

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 59/187 (31%), Gaps = 22/187 (11%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT--FADEMSKLTILE 284
            L+  E I + K     +++   E     +        +LE+++         ++L   +
Sbjct: 92  QLQNAEQIAKVKVAQVKVSDNQRELARISSLVTSRTVAELERDRLQTLIDTTRAELEQAQ 151

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHV 342
            +   ++I++P  G  +  +  S  +         +I          +   V  + IQ +
Sbjct: 152 SSLNDRSIVAPFNGR-LGLRQVSVGSLVTPGT---EITTLDDISKIKLDFSVPERFIQDL 207

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           + G     +   + D     FK  +  ID  ++                 I      + +
Sbjct: 208 QPGKQVEAKAVAFPDEI---FKGKVISIDSRVNPTT-----------RAVIVRAEIPNPD 253

Query: 403 IELRNGF 409
           + L  G 
Sbjct: 254 LRLLPGM 260



 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 47/121 (38%), Gaps = 4/121 (3%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +I  + + P+   V + G     ++V  I    + ++   + ++G  + +G  L+  ++ 
Sbjct: 38  VIATAAMAPVRDEVEAIGTNKAYESV-TITPKVTDVVTSLKFDDGDIVKKGDLLVQLQNA 96

Query: 91  ETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E    + + +V +   +     I +  ++      + D L+   ++   +L       + 
Sbjct: 97  EQIAKVKVAQVKVSDNQRELARISSLVTSRTVAELERDRLQTLIDTTRAELEQAQSSLND 156

Query: 148 T 148
            
Sbjct: 157 R 157


>gi|146292804|ref|YP_001183228.1| RND family efflux transporter MFP subunit [Shewanella putrefaciens
           CN-32]
 gi|145564494|gb|ABP75429.1| efflux transporter, RND family, MFP subunit [Shewanella
           putrefaciens CN-32]
          Length = 361

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 59/194 (30%), Gaps = 22/194 (11%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT--FADEM 277
           +R      L+  E I + K     + +   E N   +        +LE+++         
Sbjct: 85  KRGDLLVQLQNAEQIAKVKAAQVKVTDNKRELNRISSLVTSRTVAELERDRLQTLIDTTR 144

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVT 335
           ++L   + +   + IL+P  G  +  +  S  +         +I          +   V 
Sbjct: 145 AELEQAQVSLNDRRILAPFDGR-LGLRQVSVGSLVTPGT---EITTLDDISKIKLDFSVP 200

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            + IQ ++ G         + D     F  I+  ID  ++                 I  
Sbjct: 201 ERFIQELRPGKLVEATAIAFPDET---FNGIVTSIDSRVNPTT-----------RAVIVR 246

Query: 396 LAFSDNNIELRNGF 409
               + ++ L  G 
Sbjct: 247 AEIPNPDLRLLPGM 260


>gi|327542476|gb|EGF28955.1| Membrane-fusion protein [Rhodopirellula baltica WH47]
          Length = 569

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 71/202 (35%), Gaps = 10/202 (4%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR-SIYLNRLD-LENKSSLLRAL 191
           RE +L   +       S+    G       + ++L      + + RL  L  + +     
Sbjct: 147 RELRLASEVAGRVVELSENVRAGRKVKQGEVLIRLDATEYELEVKRLQALAQQEAAEENS 206

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +    ++   +++L +K    Q ++ +QER    + +  R     + +  R      D +
Sbjct: 207 VQVGIENTLQLQSLAQK----QLEIARQERERINALVAQRAASASEVDTARRAELAADAS 262

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +E  N  +E++  L+      +     L        +  I SPI G +V ++     ++
Sbjct: 263 LVELENRRRELTAQLQLVTEKRSLTEVLLERARLDLSRCEIKSPIDGRVVSSEV-EEQSF 321

Query: 312 AQQSQPLMKIVPHSKLTYIRAK 333
                  + I      + +  +
Sbjct: 322 LPTGTTFITI---EDTSAVEVR 340



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 73/198 (36%), Gaps = 15/198 (7%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKF--QVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           ++  +G ++    +  + S  +G + +    V  G ++ QG  L+  +  E        +
Sbjct: 136 AIDVNGVVVPLRELR-LASEVAGRVVELSENVRAGRKVKQGEVLIRLDATEY-------E 187

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           + +K L+     E +  + +    +   +     ++QL   + +             ++ 
Sbjct: 188 LEVKRLQALAQQEAAEENSVQVGIENTLQLQSLAQKQL--EIARQERERINALVAQRAAS 245

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              +        +   + ++LEN+   L A L    +  ++ + L E+   ++ DL++ E
Sbjct: 246 ASEVDTARRAELAADASLVELENRRRELTAQLQLVTEKRSLTEVLLER---ARLDLSRCE 302

Query: 221 RIVYKSTLELRENIHEQK 238
                    +   + EQ 
Sbjct: 303 IKSPIDGRVVSSEVEEQS 320


>gi|307316579|ref|ZP_07596022.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           AK83]
 gi|306897777|gb|EFN28520.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           AK83]
          Length = 384

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 55/206 (26%), Gaps = 19/206 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHE-QKNMLRHINELYDEANLEFANYLKEISRDL-E 267
            +++ D    +  V  +   L     + Q   L  +           +    + +  L +
Sbjct: 94  ILARIDATDYQLAVTSAEANLLAAEKQVQTTALAKLRAEQLFTKSFSSQAQLDQATLLYD 153

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q   T     S L+  +       + +   G +    +           P++  V     
Sbjct: 154 QAVSTRDSAASSLSQAKNQVNYTDLKADQNGIVTAVNAD-IGQVVGTGTPVVT-VAVDGE 211

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +   V    I   K G    VRF              + ++     Q+         +
Sbjct: 212 KEVEIAVPEIDIAEFKPGKPVGVRF---WSNDMLVLDGHVREVSGSADQRSRT------F 262

Query: 388 EVILKITDLAFSDNNIELRNGFPAEV 413
            V + +       N+  +  G  A V
Sbjct: 263 SVRVSL------LNDERVLLGMTATV 282



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 29/102 (28%), Gaps = 2/102 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I +  V  G ++  G  L   +  +    +   + ++      + T  +AL  L  +
Sbjct: 75  GGKITERLVNIGDRVKPGDILARIDATDYQLAVTSAEANLLAAEKQVQT--TALAKLRAE 132

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
               +      +      L     +        +S     + 
Sbjct: 133 QLFTKSFSSQAQLDQATLLYDQAVSTRDSAASSLSQAKNQVN 174


>gi|256383737|gb|ACU78307.1| viral A-type inclusion protein repeat protein [Mycoplasma mycoides
           subsp. capri str. GM12]
 gi|256384568|gb|ACU79137.1| viral A-type inclusion protein repeat protein [Mycoplasma mycoides
           subsp. capri str. GM12]
 gi|296455259|gb|ADH21494.1| viral A-type inclusion protein repeat protein [synthetic Mycoplasma
           mycoides JCVI-syn1.0]
          Length = 754

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 74/193 (38%), Gaps = 5/193 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    I   +  + N++   +  K+ L    N+ D   K   + E QL     +  +  S
Sbjct: 243 DIEAKISFAESQLINVKSEQERIKNQLQQKQNEIDKNNKLISNLEAQLQQLKSELENLNS 302

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +        +   LK K  ++  I       E   + L+  ++S + +L   +N    N 
Sbjct: 303 QKSENWNKDLKNQLKEKQDQLTQIKSEITKNEQAINRLKEQVTSLESELETSRN---NNL 359

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLKEISRDLEQ 268
             QN+L ++++ +     E      E   +   IN      +   + +  L++  + +E+
Sbjct: 360 EKQNELKEKQKKIENINKENNSKKQESLQLESQINILNSKIQEQEKVSQELEKKIKKVEK 419

Query: 269 NQRTFADEMSKLT 281
           N+    +E+ KL 
Sbjct: 420 NKNIIEEEIEKLR 432



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 67/153 (43%), Gaps = 9/153 (5%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           +   ++T  +     I S+ + LK K   +++I     D ENK + L   +++   ++T 
Sbjct: 27  IAVSNNTKEQSMLNQIKSIKKELKTKELELKNIQKILNDSENKKNELTNQINNLDANIT- 85

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELR---ENIHEQKNMLRHINELYDEANLEFANY 258
             +L +K   ++N LN+ +  + K   E++   +NI  ++N ++ + E   E        
Sbjct: 86  --SLNDKGKTNKNRLNKLDADLVKINSEIKLDNQNISLKENEIKKLEEQIKENKRLLKTI 143

Query: 259 LKEI---SRDLEQNQRTFADEMSKLTILEKTRE 288
           L E     ++LE           + + LE  ++
Sbjct: 144 LNEFFKKEKELEDLFAKNEKINKEKSELENVKK 176


>gi|254507020|ref|ZP_05119158.1| efflux transporter, RND family, MFP subunit [Vibrio
           parahaemolyticus 16]
 gi|219550015|gb|EED27002.1| efflux transporter, RND family, MFP subunit [Vibrio
           parahaemolyticus 16]
          Length = 395

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 72/210 (34%), Gaps = 22/210 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL-EQN 269
           V++ DL  Q     ++  EL +           ++ +      +  +   +   +L +Q 
Sbjct: 81  VNKGDLIAQ-LDDAQARAELDKAKSSLALAESKLDRVLALLKKQPDSMSAQDVEELKQQA 139

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               AD   K T      +   +++P  G  + N + S  +  + +  L+ ++       
Sbjct: 140 NLARADFRQKKT----DLQNYQLVAPFNGQ-LTNFTHSVGSRVEAATALVSLIKLD-PVE 193

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   ++  ++   + G   ++    Y +     F   +  I P++ +             
Sbjct: 194 VHYSISQNEVGKAQLGQPVSISVDAYPNQ---SFVGKVNYIAPLVDESSG---------- 240

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            ++I      + N +L  G  A+V  T   
Sbjct: 241 RVEI-HAHLENQNNQLVPGMFAKVSQTVGK 269



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 5/125 (4%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K    E+G Q+ +G  +   +D +    +D  K S+      +D   + L        +
Sbjct: 70  LKALNFEDGDQVNKGDLIAQLDDAQARAELDKAKSSLALAESKLDRVLALLK--KQPDSM 127

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             +  E  ++Q       +    + + NY + + +     +LT       +R++      
Sbjct: 128 SAQDVEELKQQANLARADFRQKKTDLQNYQLVAPFN---GQLTNFTHSVGSRVEAATALV 184

Query: 187 LLRAL 191
            L  L
Sbjct: 185 SLIKL 189


>gi|146339274|ref|YP_001204322.1| hypothetical protein BRADO2249 [Bradyrhizobium sp. ORS278]
 gi|146192080|emb|CAL76085.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 353

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 58/392 (14%), Positives = 121/392 (30%), Gaps = 81/392 (20%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + LL    + GL  + +L P    +   GE+  +   ++I +   G +K   V  G  + 
Sbjct: 36  IVLLIAAAVAGLSVYYLLKP--QPLLVQGEV--DATRLDIAARVDGRVKDVPVARGQNVA 91

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G  L++ ++ ET                              K D +       E QL 
Sbjct: 92  SGAVLVSIDNPETVA----------------------------KRDQMVAGKAVAEAQLA 123

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           + L     T  +      + + R+   ++                           QK  
Sbjct: 124 NVLA---GTRPETVAARKAELERAQANRI-------------------------LAQKTF 155

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              + L ++    Q  L+Q             + +HE +  +      YD+A   +    
Sbjct: 156 DRARTLADQGNAPQARLDQA-----------TDTLHESERAVDQAQSAYDQAVNGYTKEE 204

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           ++I       +       + + +++   +Q  + +P+A  +          Y     PL+
Sbjct: 205 RDI------ARANVEKAEADIKVVQSLIDQLVVQAPLAAQVYQRNV-EPGEYVAPGVPLL 257

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++      +I   +    +++VK G    VR P   D +      +I      +S +  
Sbjct: 258 SLINLDD-LWIHFDLREDLMRNVKTGDRFDVRIPALDDRKITVVVKLIASKGEYVSWRAT 316

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
                  +++          +   ELR G  A
Sbjct: 317 RATGD--FDLRTFSIRAYPVEPVPELRPGMSA 346


>gi|26987888|ref|NP_743313.1| secretion protein HlyD family protein [Pseudomonas putida KT2440]
 gi|24982594|gb|AAN66777.1|AE016306_3 membrane fusion protein, putative [Pseudomonas putida KT2440]
          Length = 289

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 62/200 (31%), Gaps = 44/200 (22%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E I  +      IN                        +    +  ++L +      +  
Sbjct: 113 EAISAELRENAQINAAI--------------------ARGELHEAEAQLQVARINLARSE 152

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P +G I   +  +  NY    + +M +V      YI+A     ++  ++ G T  V 
Sbjct: 153 VRAPRSGHITNLRL-AEGNYVNTGESVMALV-DDSTFYIQAYFEETKLPRIRVGDTVKVW 210

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ---------------EYYEVILKITDL 396
                    +  +  +E I   I+ +++N  +Q               +   V +++  +
Sbjct: 211 L----MGTGEPMQGHVESISRGITDRNSNPDSQLLPEVEPTFNWVRLAQRIPVRIRLDQV 266

Query: 397 AFSDNNIELRNGFPAEVLFT 416
                 + L  G  A V   
Sbjct: 267 ---PEGLTLSAGMTASVQVH 283



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 42/117 (35%), Gaps = 2/117 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV--SIKNLRCH 109
              +VV I    SG +++ +V +  Q+  G  L++ +       +D        +  +  
Sbjct: 39  VRADVVVIAPDVSGWVRELKVHDNQQVKAGDLLMSIDRERFQAALDQASAVTETRAQQLR 98

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +   ++A         +  +  E+ +       G+ H   +++    I+     ++ 
Sbjct: 99  LREREAARRTALGPEAISAELRENAQINAAIARGELHEAEAQLQVARINLARSEVRA 155


>gi|32473737|ref|NP_866731.1| multidrug resistance efflux pump [Rhodopirellula baltica SH 1]
 gi|32444273|emb|CAD74271.1| conserved hypothetical protein-putative multidrug resistance efflux
           pump [Rhodopirellula baltica SH 1]
          Length = 569

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 71/202 (35%), Gaps = 10/202 (4%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR-SIYLNRLD-LENKSSLLRAL 191
           RE +L   +       S+    G       + ++L      + + RL  L  + +     
Sbjct: 147 RELRLASEVAGRVVELSENVRAGRKVKQGEVLIRLDATEYELEVKRLQALAQQEAAEENS 206

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +    ++   +++L +K    Q ++ +QER    + +  R     + +  R      D +
Sbjct: 207 VQVGIENTLQLQSLAQK----QLEIARQERERINALVAQRAASASEVDTARRAELAADAS 262

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            +E  N  +E++  L+      +     L        +  I SPI G +V ++     ++
Sbjct: 263 LVELENRRRELTAQLQLVTEKRSLTEVLLERARLDLSRCEIKSPIDGRVVSSEV-EEQSF 321

Query: 312 AQQSQPLMKIVPHSKLTYIRAK 333
                  + I      + +  +
Sbjct: 322 LPTGTTFITI---EDTSAVEVR 340



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 63/176 (35%), Gaps = 14/176 (7%)

Query: 65  GIIKKF--QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           G + +    V  G ++ QG  L+  +  E        ++ +K L+     E +  + +  
Sbjct: 157 GRVVELSENVRAGRKVKQGEVLIRLDATEY-------ELEVKRLQALAQQEAAEENSVQV 209

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
             +   +     ++QL   + +             ++    +        +   + ++LE
Sbjct: 210 GIENTLQLQSLAQKQL--EIARQERERINALVAQRAASASEVDTARRAELAADASLVELE 267

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           N+   L A L    +  ++ + L E+   ++ DL++ E         +   + EQ 
Sbjct: 268 NRRRELTAQLQLVTEKRSLTEVLLER---ARLDLSRCEIKSPIDGRVVSSEVEEQS 320


>gi|327286835|ref|XP_003228135.1| PREDICTED: cingulin-like protein 1-like [Anolis carolinensis]
          Length = 1270

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 65/190 (34%), Gaps = 3/190 (1%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  +  +  LR  +D E      L ++ D  +   +  ++QL + + +  +   ++    
Sbjct: 589 EELEKEVSELRRKLDLEVRNQQNLCDERDAAKAELQEFQQQLEEIMEEKDTFQRQLEESE 648

Query: 157 --ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-Q 213
             +      L               DL+++ S +   L   +      + L  +  +  +
Sbjct: 649 KDLRQNLEELFQVKMEREQHQTEIRDLQDQLSEMHDELDCAKHADDGERELLIEELMQLK 708

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            DL        +    LR+   E   +   + E     + E     ++  ++L++ ++  
Sbjct: 709 QDLQAILMAKEQQEEVLRKRERELTALKGALKEEVSTHDREMDQLKEQHDQELQKLRKDL 768

Query: 274 ADEMSKLTIL 283
            +   K+  L
Sbjct: 769 EEATEKVDAL 778



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 64/179 (35%), Gaps = 5/179 (2%)

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            I  E   L  +  K ++ EK    +E   L             +      +  +L    
Sbjct: 795 EITEENQHLKEILTKLEIQEKELH-KELDHLRGERSKMEERMDTYEKKQQELEAALVQSE 853

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            +++++      LE + +  +   S   ++   + +  +  A  ++ L + +  +     
Sbjct: 854 DKVQALESTNASLEAQLADAQKNFSQLSQEQQQLIDRLKDEANQKDQLKRMKSELENERW 913

Query: 229 ELRENIHEQKNMLRHINELYD----EANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
           +L + I +    +  I E+      E   +  +Y ++  R+L + QR   D+  +L   
Sbjct: 914 QLDKTIEKLHKEMAEIIEVSRASSLELQNQLDDYKEKNRRELAETQRQLKDKNLELEKA 972



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 80/227 (35%), Gaps = 27/227 (11%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E    +++++  +     H+  E+S ++   + Y+  ++  E+   Q  D +    ST +
Sbjct: 805  EILTKLEIQEKELHKELDHLRGERSKMEERMDTYEKKQQELEAALVQSEDKVQALESTNA 864

Query: 151  KVFNYGISSVYR-------------SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             +      +                 LK +  +   +   + +LEN+   L   +    K
Sbjct: 865  SLEAQLADAQKNFSQLSQEQQQLIDRLKDEANQKDQLKRMKSELENERWQLDKTIEKLHK 924

Query: 198  D------------LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            +            L +   L +    ++ +L + +R +    LEL +       +   + 
Sbjct: 925  EMAEIIEVSRASSLELQNQLDDYKEKNRRELAETQRQLKDKNLELEKAHLATLKLQEEVR 984

Query: 246  ELYDEAN--LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             + +E        +     ++ LEQ  +    E+     L++ R ++
Sbjct: 985  FMEEELRDHQRAQDEAITKTQLLEQTVKALEYELEAKNHLKEDRARQ 1031


>gi|307320271|ref|ZP_07599690.1| polysaccharide export protein [Sinorhizobium meliloti AK83]
 gi|306894150|gb|EFN24917.1| polysaccharide export protein [Sinorhizobium meliloti AK83]
          Length = 437

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 67/200 (33%), Gaps = 1/200 (0%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D ++++        ++ +R  +    + +  L  +     +   S    +   LG     
Sbjct: 158 DKQSSEAEITLTGELRTIRDSLLRSNARISRLKAELSGATEISFSDSLAIDGALGAVARE 217

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMKNLFE 207
              V               L+ +R +Y   +D L  K     A + + +K+L  +K+L E
Sbjct: 218 QETVIFAARLKALERQSKSLSELRDLYNQEIDVLGVKMKGAEASIKAAEKELGGVKSLVE 277

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           K     +  ++ ER +     +  + +       ++I+E           +  E++  L+
Sbjct: 278 KGVAVASRQSELERALAGYRADRLDLVTAIMRARQNISEATRNLEGLNDRHKSEVAAALQ 337

Query: 268 QNQRTFADEMSKLTILEKTR 287
             Q        K    E+  
Sbjct: 338 SEQEKVDQLKLKRETTERLL 357


>gi|16131457|ref|NP_418043.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli str. K-12 substr. MG1655]
 gi|89110426|ref|AP_004206.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli str. K-12 substr. W3110]
 gi|170018184|ref|YP_001723138.1| secretion protein HlyD family protein [Escherichia coli ATCC 8739]
 gi|170083095|ref|YP_001732415.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli str. K-12 substr. DH10B]
 gi|193061867|ref|ZP_03042964.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E22]
 gi|193068512|ref|ZP_03049474.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E110019]
 gi|194427502|ref|ZP_03060051.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B171]
 gi|209921053|ref|YP_002295137.1| hypothetical protein ECSE_3862 [Escherichia coli SE11]
 gi|238902676|ref|YP_002928472.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli BW2952]
 gi|254038775|ref|ZP_04872831.1| inner membrane protein yiaV [Escherichia sp. 1_1_43]
 gi|256025684|ref|ZP_05439549.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia sp. 4_1_40B]
 gi|260846699|ref|YP_003224477.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli O103:H2 str. 12009]
 gi|293413023|ref|ZP_06655691.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293453897|ref|ZP_06664316.1| inner membrane protein yiaV [Escherichia coli B088]
 gi|300815181|ref|ZP_07095406.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 107-1]
 gi|300822006|ref|ZP_07102149.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 119-7]
 gi|300902782|ref|ZP_07120736.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 84-1]
 gi|300920478|ref|ZP_07136909.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 115-1]
 gi|300950316|ref|ZP_07164249.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 116-1]
 gi|300957629|ref|ZP_07169828.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 175-1]
 gi|301026623|ref|ZP_07190043.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 196-1]
 gi|301304642|ref|ZP_07210751.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 124-1]
 gi|301645975|ref|ZP_07245882.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 146-1]
 gi|307140279|ref|ZP_07499635.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli H736]
 gi|331644299|ref|ZP_08345428.1| inner membrane protein YiaV [Escherichia coli H736]
 gi|331670424|ref|ZP_08371263.1| inner membrane protein YiaV [Escherichia coli TA271]
 gi|331679670|ref|ZP_08380340.1| inner membrane protein YiaV [Escherichia coli H591]
 gi|586725|sp|P37683|YIAV_ECOLI RecName: Full=Inner membrane protein yiaV; Flags: Precursor
 gi|466724|gb|AAB18563.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655]
 gi|1790012|gb|AAC76610.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli str. K-12 substr. MG1655]
 gi|85676457|dbj|BAE77707.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli str. K12 substr. W3110]
 gi|169753112|gb|ACA75811.1| secretion protein HlyD family protein [Escherichia coli ATCC 8739]
 gi|169890930|gb|ACB04637.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli str. K-12 substr. DH10B]
 gi|192932657|gb|EDV85254.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E22]
 gi|192958163|gb|EDV88604.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E110019]
 gi|194414542|gb|EDX30815.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B171]
 gi|209914312|dbj|BAG79386.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|226839281|gb|EEH71304.1| inner membrane protein yiaV [Escherichia sp. 1_1_43]
 gi|238861738|gb|ACR63736.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli BW2952]
 gi|257761846|dbj|BAI33343.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli O103:H2 str. 12009]
 gi|260447396|gb|ACX37818.1| secretion protein HlyD family protein [Escherichia coli DH1]
 gi|291322023|gb|EFE61454.1| inner membrane protein yiaV [Escherichia coli B088]
 gi|291468670|gb|EFF11163.1| conserved hypothetical protein [Escherichia coli B354]
 gi|299879638|gb|EFI87849.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 196-1]
 gi|300315646|gb|EFJ65430.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 175-1]
 gi|300405173|gb|EFJ88711.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 84-1]
 gi|300412522|gb|EFJ95832.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 115-1]
 gi|300450337|gb|EFK13957.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 116-1]
 gi|300525369|gb|EFK46438.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 119-7]
 gi|300532073|gb|EFK53135.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 107-1]
 gi|300840120|gb|EFK67880.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 124-1]
 gi|301075779|gb|EFK90585.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 146-1]
 gi|309703990|emb|CBJ03333.1| HlyD-family secretion protein [Escherichia coli ETEC H10407]
 gi|315138164|dbj|BAJ45323.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli DH1]
 gi|315254118|gb|EFU34086.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 85-1]
 gi|320201390|gb|EFW75971.1| Multidrug resistance protein A [Escherichia coli EC4100B]
 gi|323160644|gb|EFZ46583.1| hlyD family secretion family protein [Escherichia coli E128010]
 gi|323934866|gb|EGB31248.1| HlyD family protein secretion protein [Escherichia coli E1520]
 gi|323944516|gb|EGB40587.1| HlyD family protein secretion protein [Escherichia coli H120]
 gi|323959406|gb|EGB55066.1| HlyD family protein secretion protein [Escherichia coli H489]
 gi|324017897|gb|EGB87116.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 117-3]
 gi|331036593|gb|EGI08819.1| inner membrane protein YiaV [Escherichia coli H736]
 gi|331062486|gb|EGI34406.1| inner membrane protein YiaV [Escherichia coli TA271]
 gi|331072842|gb|EGI44167.1| inner membrane protein YiaV [Escherichia coli H591]
 gi|332345555|gb|AEE58889.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 378

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|332750123|gb|EGJ80534.1| hlyD family secretion family protein [Shigella flexneri 4343-70]
 gi|332996192|gb|EGK15819.1| hlyD family secretion family protein [Shigella flexneri VA-6]
 gi|332997187|gb|EGK16803.1| hlyD family secretion family protein [Shigella flexneri K-218]
          Length = 378

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|298293195|ref|YP_003695134.1| secretion protein HlyD [Starkeya novella DSM 506]
 gi|296929706|gb|ADH90515.1| secretion protein HlyD family protein [Starkeya novella DSM 506]
          Length = 286

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 72/231 (31%), Gaps = 30/231 (12%)

Query: 207 EKNAVSQNDLN-QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           +  AV Q D+  + +R  +   LE  E   E +           E   +  + + +   +
Sbjct: 65  DNQAVKQGDVLFRIDRARFAIALEQAEAAVEGRKATLEQARRDRERYEQLKDVVSQQKTE 124

Query: 266 LEQNQRTFADEMSKLTILEKTR-----EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
             + Q   A    +  + ++       E+  + + + GTI         +Y     P M 
Sbjct: 125 QARMQEAEAAMAHRQALADRDLARLNLERSEVKASVNGTITNLSLR-PGDYITAGTPEMA 183

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +V  +    I       ++  +  G   T+R            +  +E I   I  ++  
Sbjct: 184 LV-DTDSLRIEGYFEETKLARISVGAPVTIRLMGQPA----ALEGHVESIAAGIEDRERT 238

Query: 381 LQTQ---------------EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +                  +   V + + ++    ++  L  G  A V+  
Sbjct: 239 VGNGLLANINPTFNWVRLAQRVPVRIALDNV---PDDARLVAGLTATVVVR 286



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 84/260 (32%), Gaps = 28/260 (10%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              ++V +    SG + +  V +   + QG  L   +       ++  + +++  +  ++
Sbjct: 43  VRADIVGVAPDVSGFVSEVLVRDNQAVKQGDVLFRIDRARFAIALEQAEAAVEGRKATLE 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +   +               R EQL D + +  +  +++     +  +R         
Sbjct: 103 QARRDRE---------------RYEQLKDVVSQQKTEQARMQEAEAAMAHRQALADRDLA 147

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKD----------LTMMKNLFEKNAVSQNDLNQQER 221
           R + L R +++   +     LS    D          L    +L  +    +  L +   
Sbjct: 148 R-LNLERSEVKASVNGTITNLSLRPGDYITAGTPEMALVDTDSLRIEGYFEETKLARI-S 205

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
           +    T+ L       +  +  I    ++      N L   + +   N    A  +    
Sbjct: 206 VGAPVTIRLMGQPAALEGHVESIAAGIEDRERTVGNGLL-ANINPTFNWVRLAQRVPVRI 264

Query: 282 ILEKTREQKTILSPIAGTIV 301
            L+   +   +++ +  T+V
Sbjct: 265 ALDNVPDDARLVAGLTATVV 284


>gi|189233711|ref|XP_968604.2| PREDICTED: similar to CG18304 CG18304-PA [Tribolium castaneum]
          Length = 1981

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 88/229 (38%), Gaps = 9/229 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE-----EQLLD 140
              + +    ++D K+  +  LR   +     ++++  + D L K  +  E     ++ + 
Sbjct: 1323 ELDKVRYKAMLDDKQSELDQLRKENEAMHDQMEYMRKETDELRKKLDDYEKVNKVQRNIS 1382

Query: 141  FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN-KSSLLRALLSSHQKDL 199
                      +     +SS+ +S K++L   +  Y N+L + N +   L+  +   +++ 
Sbjct: 1383 ADSSAMEKEIRQLKAKLSSIEKSKKLELGEYKMRYDNQLSIVNGELQQLQGQVMRFKRER 1442

Query: 200  TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
               K++ E    +  DL    R    +T        E K  +  + +       E +   
Sbjct: 1443 DTYKHMLESAQKTIGDLKNSPRSAKDNTNPSAHYDEESKTKIATLEQQISCMEDELSEAR 1502

Query: 260  KE---ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
             E   +  +L   + T+  +MS+L       E++ ILS     IV  ++
Sbjct: 1503 LECSRLKTELVSERSTWEVKMSELHSRVNELEEEKILSSGRTKIVGLRT 1551



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 84/209 (40%), Gaps = 5/209 (2%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            E  +  +  D     I  L+ ++ T   ++  L  ++ K + L+   +S+E++L     +
Sbjct: 934  EQKKVQEEKDKLDEEIAKLKANLKTATYKQDELTLISQKAESLKLDLDSKEKELKTIKKE 993

Query: 145  YHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
              S  +++      +S + R       +++       DLE K    ++   S + + +  
Sbjct: 994  LDSKINELSEKASKVSQLERKFSETEEKLKIAEKREKDLEAKIEEEKSKTKSKEGEQSKW 1053

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
                +K      +LN +   +  +    ++ I   +  L+   E + + +      + ++
Sbjct: 1054 NEERKKYNNQIEELNNKILSLETTVESKKKLIERLEENLKKERESFSKVDELETREITKL 1113

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +L +++   AD  SKL   +K+++   
Sbjct: 1114 KDELSKSKANLADVESKLASSQKSQKNLE 1142



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 70/207 (33%), Gaps = 17/207 (8%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
               +     LR  +   ++  + L ++ + ++K     EEQ+ +    +    +     
Sbjct: 332 AQAAQKIADELRSKLLAAETLCEELMDENEDIKKELRDMEEQMDEMQDNFREDQA----V 387

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             +S+ + L       R +       E K+  L    +  ++ L       E++    N+
Sbjct: 388 EYTSLKKELDQTTKNCRILSFKLRKAERKTEQLEQEKNEAERKLKEKMKQLEQDLKLANE 447

Query: 216 L-NQQERIVYKSTLELRENIHEQKNMLRHINEL------------YDEANLEFANYLKEI 262
           +  + ++ + ++  +L+E     K     +  +                     +   ++
Sbjct: 448 VSIRLQKELDETNQKLQEESKTSKKKAPKLGSIGKFPSADGKVSRESLTRGGSQDDPAQL 507

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQ 289
            RDL+ +    AD   +L   E+  + 
Sbjct: 508 LRDLQDSMEREADLREQLKFAEEEAQN 534



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 63/206 (30%), Gaps = 4/206 (1%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ED   + ++ LKK++ +  R    +  +                +  +   +    + 
Sbjct: 541 RIEDDNESLVLQLKKMATRA-RSRKLSPTNNSRLTPEPPSEKGDVSDDEDPAEIKLQLEL 599

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               + V    +  +        T+ + +                           +K L
Sbjct: 600 SEQEASVLRRKVEDLEAENHRIKTKNKELQDKLTAKTTTKRTAVGGEKGTTLQNQKLKVL 659

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            ++    +  L ++ER   +   EL  N    K++ +  +   D+  L+    L+ I ++
Sbjct: 660 EDEANDLRKKLIEKERDCERLHAELSLNQKRSKSVQKSKSLDLDQQTLDLKRQLQVIEQE 719

Query: 266 ---LEQNQRTFADEMSKLTILEKTRE 288
              L    ++   E  KL    K  +
Sbjct: 720 ASILRNKIQSLEAENEKLISENKKLQ 745


>gi|53712886|ref|YP_098878.1| ABC transporter permease [Bacteroides fragilis YCH46]
 gi|52215751|dbj|BAD48344.1| ABC transporter permease [Bacteroides fragilis YCH46]
          Length = 415

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 67/202 (33%), Gaps = 25/202 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+    L L+ +   L   L+  Q+       L +
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQEHLRLKQERIGLNKELAVKQRRYEQYSRLIK 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  ++Q +          +  +L             I+E   + N    + +  +  ++ 
Sbjct: 168 EQLIAQEEFRLAAEEYEAARAQLE-----------VIDERIRQDNFFRESQVHSLDENIR 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+ A    +        E   + +PI G +    +          + + +I+     
Sbjct: 217 NMKRSLALVRER-------VENLKVKAPIDGQVGNLDA-QIGQSIAAGEHIGQIITPD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTAT 349
             ++A++    ++ V  G  A 
Sbjct: 267 LKVQAQIDEHYVERVVPGLPAD 288



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/213 (11%), Positives = 73/213 (34%), Gaps = 17/213 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G+++  + ++ + +   G +++   E G+ +  G  +L   +       +++   +
Sbjct: 62  IRVIGQVMP-NRIIYMDAIEGGRVEERLKEEGAIVKAGDVILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++  ++N R  ++ E   L       +  E A + R  +    L K      + F   
Sbjct: 121 AYQENELRNTRISMEQEHLRLKQERIGLN-KELAVKQRRYEQYSRLIKEQLIAQEEFRLA 179

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                 +          I  +    E++   L   + + ++ L +++         + + 
Sbjct: 180 AEEYEAARAQLEVIDERIRQDNFFRESQVHSLDENIRNMKRSLALVRE--------RVEN 231

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            + +  +      L   I +      HI ++  
Sbjct: 232 LKVKAPIDGQVGNLDAQIGQSIAAGEHIGQIIT 264


>gi|227544366|ref|ZP_03974415.1| SMC structural maintenance of chromosomes partitioning protein
           [Lactobacillus reuteri CF48-3A]
 gi|300909773|ref|ZP_07127234.1| cell division protein Smc [Lactobacillus reuteri SD2112]
 gi|227185629|gb|EEI65700.1| SMC structural maintenance of chromosomes partitioning protein
           [Lactobacillus reuteri CF48-3A]
 gi|300893638|gb|EFK86997.1| cell division protein Smc [Lactobacillus reuteri SD2112]
          Length = 1187

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 8/202 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +        +     S  + L N+  +LE   + ++ Q  D+  +      
Sbjct: 716 DYQQQVQTLQDKFHEQESNCQLISSKHETLTNRVQILETQNKQQDTQHQDYESQVQQN-- 773

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
              N     V + L   + +++ I     +L+N  S     L+  Q+ + + +   ++  
Sbjct: 774 ---NEQADKVNQKLTQVVAKIKQILTQIDELQNDESTQARQLAQMQQKIAVAEERLQQYQ 830

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLE 267
               + N+Q R V +S  ++   I E        +           +  +E ++    LE
Sbjct: 831 RQSQEYNRQRREVEESLEKVTVAIAELTTQSASQSTSEKSTQTALKDAKEEQAKAKVQLE 890

Query: 268 QNQRTFADEMSKLTILEKTREQ 289
            N     +   KL+  E    +
Sbjct: 891 DNSVALEELEQKLSQAEAHYNR 912



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 72/211 (34%), Gaps = 6/211 (2%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           ++T +         +   + ++ R  + ++K     L  +    E+   + E+++     
Sbjct: 646 VVTLDGQLINASGAMTGGATRSQRTGLLSQKQMAKQLEEELKKQEQLAANLEQEIAKLQQ 705

Query: 144 KYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              +    V  +   + ++      + +  + I      L N+  +L             
Sbjct: 706 AQKANEQVVADYQQQVQTLQDKFHEQESNCQLISSKHETLTNRVQILETQNKQQDTQHQD 765

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            ++  ++N    + +NQ+   V     ++   I E +N          +   + A     
Sbjct: 766 YESQVQQNNEQADKVNQKLTQVVAKIKQILTQIDELQNDESTQARQLAQMQQKIAV---- 821

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               L+Q QR   +   +   +E++ E+ T+
Sbjct: 822 AEERLQQYQRQSQEYNRQRREVEESLEKVTV 852



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 65/207 (31%), Gaps = 4/207 (1%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHS 147
            +    I      I  L+    T+   L  +  K  V E+  +   R+ Q  +   +   
Sbjct: 785 TQVVAKIKQILTQIDELQNDESTQARQLAQMQQKIAVAEERLQQYQRQSQEYNRQRREVE 844

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              +     I+ +      + T  +S      D + + +  +  L  +   L  ++    
Sbjct: 845 ESLEKVTVAIAELTTQSASQSTSEKSTQTALKDAKEEQAKAKVQLEDNSVALEELEQKLS 904

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +     N L + +R        L E   + ++M+        E      +  ++   DL+
Sbjct: 905 QAEAHYNRLQELQRTALDDRNNLNEERVKYESMVEQALNRLSEQYSMTIDEARQQMSDLD 964

Query: 268 QNQRTFADEMSKLTILEKTREQKTILS 294
           +   T A  +  L        Q  + +
Sbjct: 965 EE--TLATRLKLLKRGLDDLGQVNVGA 989



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 72/213 (33%), Gaps = 7/213 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E +E    I    +  K     +D  ++   +      + +   +  + + +    + 
Sbjct: 201 QIEPLEEQSAIAQDYLEQKKQFDVLDRTQTVRHYDEYYEKLTKLGAKLDQAEAMVRDYQG 260

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            +   +     +    + L     R+++I LN+ +   K    +++ S  ++     +  
Sbjct: 261 QADRDQQQLDNLKQKRQQLNATKDRLQAIILNQTEAIAKYENQQSVSSVRREQRENEQRR 320

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKE 261
                  Q +LN + + V  +     E + EQK ++      ++ A      E    LK+
Sbjct: 321 LT---TQQAELNARLKEVKANQQANDEQLAEQKALINGQQAEFETARKMSSSERIATLKQ 377

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              DL   Q +   E + +   +    +    +
Sbjct: 378 QVEDLRNQQVSLMQERTTIHNQQSFLSRNHEQA 410


>gi|170751240|ref|YP_001757500.1| RND family efflux transporter MFP subunit [Methylobacterium
           radiotolerans JCM 2831]
 gi|170657762|gb|ACB26817.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           radiotolerans JCM 2831]
          Length = 331

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 64/214 (29%), Gaps = 24/214 (11%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFADEMSKL 280
            V ++   L     +   +        D  +L      K+  S   +  Q +       L
Sbjct: 95  AVTQAEGALASARAQAGYLAGIARRTADLDDLATTPEQKQTTSGQAQAAQASVVQAEGAL 154

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                  E+ T+ + + G +          +A   QP + +V +    +I       Q+ 
Sbjct: 155 AQARLNLERTTLRATVNGWVTNLLL-QEGGFAATGQPALTLV-NGDSFWIEGYFEETQLP 212

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ---------------E 385
            + +G  A V    + D      +  +  +   IS  D     Q               +
Sbjct: 213 RIGEGDAARVSLMAWPDR---PIRGRVTGLGRGISVADAAPGVQGLPTVNPIFTWVRLAQ 269

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              + +++ D+      I L  G  A V   A+ 
Sbjct: 270 RVPIRVELDDV---PCPIVLAAGMTANVAILAEK 300



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 42/121 (34%), Gaps = 7/121 (5%)

Query: 55  NVVEIK-SPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
            V  ++ +P  SG +   +V +   + +G  L   +     + +   + ++ + R     
Sbjct: 53  RVYTVQVAPEVSGTVVAVRVRDNQFVRKGDVLFEIDPGTFRNAVTQAEGALASARAQAGY 112

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                    +  D+      +  EQ     G+  +  + V     +     L ++ T +R
Sbjct: 113 LAGIARRTADLDDL-----ATTPEQKQTTSGQAQAAQASVVQAEGALAQARLNLERTTLR 167

Query: 173 S 173
           +
Sbjct: 168 A 168


>gi|312886725|ref|ZP_07746332.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
 gi|311300827|gb|EFQ77889.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
          Length = 412

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 100/287 (34%), Gaps = 46/287 (16%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +KM++T  + I +N++ L      L  + +   ++  +         VS N+ N  E + 
Sbjct: 69  IKMEVTSDQGIAMNKITLTATQIQLAGIQTDTVREENVGDEKTLTGTVSTNE-NTAEELS 127

Query: 224 YKSTLELRENIHEQKNMLRHINE----------LYDEANLEFANYLKEISRD-------- 265
            +    ++            + +          L  E     A   ++I ++        
Sbjct: 128 ARIAGRIQRLFIRTTGKKITVGQPLYSIYSEDLLETEREYLLARQQQKILQNPDVDYKQL 187

Query: 266 LEQNQRTF------ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +   +         A ++  L I EKT    TILS + GT+         +Y  +    M
Sbjct: 188 INAAENKLKLWGLSAAQIKNLAISEKTSATTTILSKVNGTVSEIAVH-EGDYVTEG---M 243

Query: 320 KIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            I+        ++ A+V   +  + K+G   +V    + D+  +     +E I+P +S  
Sbjct: 244 SILKTQNLNNLWVEAQVYANEAVNYKEGARVSV---AFPDLGGQNINGKVEFINPELSDA 300

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK-NTTLA 423
                        + +  ++  +    +R G  A +   +    +LA
Sbjct: 301 S-----------KVALLRVSIPNAQGLIRPGMQAYISIASGSKRSLA 336


>gi|297518439|ref|ZP_06936825.1| hypothetical protein EcolOP_12413 [Escherichia coli OP50]
          Length = 344

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/403 (11%), Positives = 122/403 (30%), Gaps = 78/403 (19%)

Query: 22  LLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  +
Sbjct: 1   VVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFV 58

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +L
Sbjct: 59  REGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAEL 118

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                ++  + S      IS+  + L        S        + + S  +A + + + +
Sbjct: 119 DSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTN 176

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           +                            ++ +  +   +   R I    D++ L+    
Sbjct: 177 I----------------------------IQAQTRVEAAQATERRIAADIDDSELK---- 204

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
                                              +P  G + Y +             +
Sbjct: 205 -----------------------------------APRDGRVQY-RVAEPGEVLAAGGRV 228

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ-- 376
           + +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     +  
Sbjct: 229 LNMVDLSD-VYMTFFLPTEQAGTLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTV 287

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           + ++ + +  + V  +I       +   ++ G P         
Sbjct: 288 ETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGVAWVRVNE 330


>gi|154685842|ref|YP_001421003.1| YknX [Bacillus amyloliquefaciens FZB42]
 gi|154351693|gb|ABS73772.1| YknX [Bacillus amyloliquefaciens FZB42]
          Length = 378

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 61/159 (38%), Gaps = 6/159 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I  +V   G +              G + K +V+ G ++ +G+ L+T+ + +     + 
Sbjct: 46  EISSTVMVPGTLKFSKEQYVFYEADKGTLDKVKVKEGDKVKKGSSLVTYTNEQLNLDKEQ 105

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +++ ++ R  I+  +  L  LN+K   L K     E        K   +          
Sbjct: 106 NELTEQSKRMQIEQVEEKLRALNSKEQDLAKQVGEAEA------KKQIESERTDLQLQQK 159

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +    LK    + +S+     +L  KS +   ++S +Q+
Sbjct: 160 TAEIELKQSDLQKQSLENQVANLNVKSEMDGTVISVNQE 198



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 81/212 (38%), Gaps = 12/212 (5%)

Query: 213 QNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           QN+L +Q + +    +E  LR    +++++ + + E   +  +E      ++ +   + +
Sbjct: 105 QNELTEQSKRMQIEQVEEKLRALNSKEQDLAKQVGEAEAKKQIESERTDLQLQQKTAEIE 164

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTI--VYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
              +D   +   LE       + S + GT+  V  ++ S  +  Q  +P++ I    +  
Sbjct: 165 LKQSDLQKQ--SLENQVANLNVKSEMDGTVISVNQEAASKKSDIQ--EPVIHIG-DPEHL 219

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +   ++      VKKG + T+       I  K +K  +  +  +  Q+ +    +   +
Sbjct: 220 IVAGNLSEYDTLKVKKGQSVTITSDA---IPGKTWKGRVAAVGLVPDQKSSAASGESTEQ 276

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +     +    N  E + GF   +       
Sbjct: 277 AVQYPFQVKLIGNLPEGKPGFKLIMNIETDKR 308


>gi|37520056|ref|NP_923433.1| permease protein DevB-like protein [Gloeobacter violaceus PCC 7421]
 gi|35211048|dbj|BAC88428.1| gll0487 [Gloeobacter violaceus PCC 7421]
          Length = 389

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/368 (11%), Positives = 108/368 (29%), Gaps = 87/368 (23%)

Query: 42  ISVSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +V+S G +  E  V+ + +P       + + +VE G  + +G  +   +          
Sbjct: 85  QAVTSLGRLEPEGEVISLSAPTFLEGARVAQVRVEEGQPVRRGQVVAVLD---------- 134

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                          +  L     +     +  E+R  Q+            +     ++
Sbjct: 135 --------------RRDRLAAALAQASRQVEVAETRLAQVQAGAKAGDLGAQRSAIARLA 180

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +  R  + +L R  +                               L++  A+S + L+ 
Sbjct: 181 AEMRIAQRELQRFEA-------------------------------LYDTGAISASQLDD 209

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           +  +V     +L+    + ++ L  I E+                 DL       A   +
Sbjct: 210 KRLVVETLNGQLQ----QARSALVAIAEVRP--------------TDLRAAAAEIAAARA 251

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
                    +   + +   G I+  ++ +        +P+ ++   ++     A+V    
Sbjct: 252 AEARARAELDTAYVRALQEGRILKIRTRAGEMV--SGEPIAEMG-RTERMEAVAEVYEDD 308

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII------SQQDNNLQTQEYYEVILK 392
           +  ++ G  ATVR          + +  + +I P+I                   EV ++
Sbjct: 309 LSRLRVGQKATVR--SLNGAFSGRLRGTVYRIVPLIGKKDVLDTDPAADVDARVAEVRIR 366

Query: 393 ITDLAFSD 400
           +       
Sbjct: 367 LDAADSRR 374


>gi|291616032|ref|YP_003518774.1| MdtA [Pantoea ananatis LMG 20103]
 gi|291151062|gb|ADD75646.1| MdtA [Pantoea ananatis LMG 20103]
          Length = 424

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/333 (9%), Positives = 102/333 (30%), Gaps = 25/333 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + + + G ++   +V  + S   G ++K     G ++  G  L   +      
Sbjct: 87  ASTADVPVYLYALGTVIPNASV-TVTSRVDGQLEKVYFTEGQKVEAGQLLAQIDPRSYEA 145

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            ++  +  +      + + +  L     L  +  +  +  +++   +  + G   +  ++
Sbjct: 146 TLNQYQGELSENMALLKSAELTLARYRKLAAQDSLSRQDLDTQIATVGQYRGAVAADQAQ 205

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           + +  ++  Y  +   ++    +         +S+ +  L++  Q     +     ++ +
Sbjct: 206 IASARLNIGYARITAPVSGRVGLRQVDPGNMIQSASMTGLVTITQMQPAAVTFSVPQSHI 265

Query: 212 S-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---ANYLKEISRDLE 267
                    +R +  +  +        +  ++ I+   D A       A +  +      
Sbjct: 266 PTLVKALHHDRTLPATAFDQDNQHALSQGQVKFISNEIDTATGTITLKAMFANDDEALYA 325

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAG----TIVYNQSFSSSNY-AQQS-----QP 317
                   + S L        Q   LS   G     I  + + +     A  +     Q 
Sbjct: 326 NQFVNLRLQTSVLKGATIIPAQALQLSS-DGSFVFIINKDNTVTRQPVTAGPAYGETWQA 384

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +++ V                I  +  G   +V
Sbjct: 385 ILQGVKPGDRLVTEG------IDRLTNGSKVSV 411


>gi|237809642|ref|YP_002894082.1| efflux transporter, RND family, MFP subunit [Tolumonas auensis DSM
           9187]
 gi|237501903|gb|ACQ94496.1| efflux transporter, RND family, MFP subunit [Tolumonas auensis DSM
           9187]
          Length = 373

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 55/152 (36%), Gaps = 20/152 (13%)

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L+  Q  +     ++  L+ T ++ TI +P  G +   ++     Y +       IV   
Sbjct: 140 LDDAQAEYLALQGQIDALQATIDRMTIRAPFNGQV-GLRNVFLGQYLKAGD---NIVRLE 195

Query: 326 KLTYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             + ++ +  V   ++  +K G    +    Y       FK  I  I+P + Q    ++ 
Sbjct: 196 DTSVMKIRFTVAQTELAKIKVGQQLDIMVDAYPQR---PFKGTIAAIEPAVKQLSGVIEV 252

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           Q            A  +    LR+G  A+V  
Sbjct: 253 Q-----------AAIPNAEGLLRSGMYAKVQV 273



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 56/143 (39%), Gaps = 9/143 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K   E+G Q+ +GT LL+         +   +  +   + + +  +S    L  K 
Sbjct: 78  GTVDKLSFESGEQVKKGTLLLSLNTDVERANLKSSQGKLPAAKANYERMRS----LYTKG 133

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL----NRLD 180
            V +   +  + + L   G+  +  + +    I + +             YL    N + 
Sbjct: 134 GVSKGNLDDAQAEYLALQGQIDALQATIDRMTIRAPFNGQVGLRNVFLGQYLKAGDNIVR 193

Query: 181 LENKSSLLRALLSSHQKDLTMMK 203
           LE+ +S+++   +  Q +L  +K
Sbjct: 194 LED-TSVMKIRFTVAQTELAKIK 215


>gi|209693714|ref|YP_002261642.1| putative multidrug transporter, HlyD family [Aliivibrio salmonicida
           LFI1238]
 gi|208007665|emb|CAQ77775.1| putative multidrug transporter, HlyD family [Aliivibrio salmonicida
           LFI1238]
          Length = 368

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 67/202 (33%), Gaps = 26/202 (12%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS------RDLEQNQRTFAD 275
            V    L +  +   +K  LR        A  ++  Y              ++ +  F  
Sbjct: 90  QVKDDQLLISLDSKVEKANLRSSQARLPAAEAKYKRYKGLFKKGSISKEAYDEAEANFFS 149

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK-- 333
             + +  L+ T E++ I +P AG I   ++     Y Q       IV     + +R +  
Sbjct: 150 LAADIEGLKATIERREIKAPFAGVI-GIRNVYLGQYLQPGT---DIVRLEDTSIMRLRFT 205

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    I  +  G    +    Y     + FK  I  I+P ++ Q   +Q Q         
Sbjct: 206 VPQTDISRINIGQDIDIYIDSYP---TETFKGSISAIEPAVNIQSGLIQVQ--------- 253

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
                 +N  +LR+G  A    
Sbjct: 254 --ADIPNNGGKLRSGMFARAEI 273



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 38/119 (31%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I K   ++GSQ+     L++ +       +   +  +          K      +   
Sbjct: 78  GVIDKISFDSGSQVKDDQLLISLDSKVEKANLRSSQARLPAAEAKYKRYKGLFKKGSISK 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +  ++A  +      D  G   +   +      + V     + L +      + + LE+
Sbjct: 138 EAYDEAEANFFSLAADIEGLKATIERREIKAPFAGVIGIRNVYLGQYLQPGTDIVRLED 196


>gi|170593755|ref|XP_001901629.1| Myosin tail family protein [Brugia malayi]
 gi|158590573|gb|EDP29188.1| Myosin tail family protein [Brugia malayi]
          Length = 1985

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 75/213 (35%), Gaps = 13/213 (6%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK--AFESREEQLLDFLGKYH 146
            + +    I   +  I+ L+  I+ E+   D L  +    +K  A    E+  L    +  
Sbjct: 1670 NADAQKTIKRYQEQIRELQMQIEDEQRQKDDLAEQLSNTQKRAAILQAEKDELANQAEMA 1729

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                +        +  ++     ++ +I   R  LE++   +   L      L     + 
Sbjct: 1730 ERARRAAEQDAIELRETVNDLTNQVNAINNTRRKLESELQTVHVELDDVTSQLKNTDEML 1789

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL-----------EF 255
            ++ +     L ++ R   + ++ +       +  ++ +    DEA             + 
Sbjct: 1790 KQASADAARLAEELRQEQEHSVHVERMRRALEVQIKEMQVRLDEAEQAALRSGQKIIAKL 1849

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
               ++E+ ++L+  QR  +D   +L   ++  +
Sbjct: 1850 EMRIRELEQELDGEQRRSSDYEKELKKGDRRIK 1882



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 82/218 (37%), Gaps = 21/218 (9%)

Query: 79   LQGTPLLTFEDIET-TDLIDLKKVSIKNLRC----HIDTEKSALDFLNNKYDVLEKAFES 133
             +       E  ++ +   + +   +  ++      ++     +  + ++ + L +A + 
Sbjct: 910  EKDQLFANLEKEKSHSAEAEGRIQKLNEIKADMERQLEELNDRVAEMEDRNETLNRAKKK 969

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             E+++ D   K              ++ ++   K +R ++I L + ++ ++   +  +  
Sbjct: 970  SEQEVSDLKRKNQELEM--------ALRKAESEKQSREQNIRLLQGEMASQDEAVARVNK 1021

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++   M + L E   V ++ +N  ER        L+  I +Q + +    E      L
Sbjct: 1022 EKKQQEEMNRKLMEDLQVEEDKVNHMER--------LKTKIEQQLDDMEEKLEREKRMRL 1073

Query: 254  EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +     +++  +L+  Q    +   +   +E+   +K 
Sbjct: 1074 DLEKAKRKVEGELKVAQENMDEITKQKHDIEQILRRKD 1111



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 62/183 (33%), Gaps = 15/183 (8%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +   ++  K   +      +D E+SA++ L  +     K  E R  +L + L +   +  
Sbjct: 1102 DIEQILRRKDADLIATVGKLDGEQSAVNKLQKQI----KDLEGRIAELEEDLEQERQSRG 1157

Query: 151  KVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            K+      +      +  +L         +++L  K     A L          ++L E 
Sbjct: 1158 KLDRAKGDLQRELDEITQRLDEQGGATAAQIELNKKREAEMAKLK---------RDLEEN 1208

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            N   +  ++   +    +  EL + + + + +   +++   +   +          +  Q
Sbjct: 1209 NMNHELQISVLRKKHSDAVAELSDQLEQLQKLKAKLDKDKAQMLRDLEEANANADAESRQ 1268

Query: 269  NQR 271
             Q 
Sbjct: 1269 KQE 1271


>gi|323974998|gb|EGB70107.1| HlyD family protein secretion protein [Escherichia coli TW10509]
          Length = 378

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|198243163|ref|YP_002214868.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|197937679|gb|ACH75012.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|326622621|gb|EGE28966.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 372

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  +      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATEMSVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPKKINDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 28/231 (12%)

Query: 18  KRMTLLSIIGIIGLITW-SILLPI-------------EISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+  W  I  P+             E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMAGWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +K   V  G  + +   L   +  +  + I   + ++  L        + L      
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNAERQQAAAELKLARVT 129

Query: 122 -NKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMR--SIYL 176
             +   L K     ++ L     +     +++   +  I     SL    T +    I  
Sbjct: 130 LARQQQLAKTQAVSQQDLDTAATEMSVKQARIGTIDAQIKRNRASLDTAKTNLEYTRIVA 189

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFE------KNAVSQNDLNQQER 221
                  + + L+       +    +  L +      K  VS+ D+     
Sbjct: 190 PMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLRA 240


>gi|238785584|ref|ZP_04629564.1| HlyD family secretion protein [Yersinia bercovieri ATCC 43970]
 gi|238713519|gb|EEQ05551.1| HlyD family secretion protein [Yersinia bercovieri ATCC 43970]
          Length = 399

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 89/274 (32%), Gaps = 34/274 (12%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMM--KNLFEKNAVSQNDLNQQERIVYKSTL 228
            +S+  +      K   + A +S   K L +   + + +   V++ D   Q+  +  +  
Sbjct: 49  EQSVLADGTIKAKKQVTVGAQVSGQIKALHITLGQQVEKGQLVAEIDDLTQQNALKDAEE 108

Query: 229 ELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            L+  + ++   +     N+L  +   +       +  D +  + T     +++  L+  
Sbjct: 109 ALKNVLAQRAAKVATQQNNQLTYQRQQQILAKGLGVRADFDSAKATLESAQAEINALDAQ 168

Query: 287 REQ--------------KTILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYI 330
             Q                I SPI GT+V             Q +  ++K V       I
Sbjct: 169 IAQAEIAVNTAKLNLGYTKISSPITGTVVAIPVEEGQTVNAVQSAPTIIK-VAQLDTMTI 227

Query: 331 RAKVTPKQIQHVKKGYTA--------TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
            A+++   +  VK G             RF       E    +I ++     S       
Sbjct: 228 EAQISEADVVKVKAGMPVYFTILGEPEERFSATLRAIEPAPDSINDETTTTTSSSSTTTT 287

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           T  YY  +  +     ++ N  LR    A+V   
Sbjct: 288 TAIYYNGLFDV-----ANPNGALRISMTAQVYIV 316



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 57/144 (39%), Gaps = 11/144 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E SV + G I  +  V  + +  SG IK   +  G Q+ +G  +   +D+   + +   
Sbjct: 48  LEQSVLADGTIKAKKQV-TVGAQVSGQIKALHITLGQQVEKGQLVAEIDDLTQQNALKDA 106

Query: 100 KVSIKNLRCHIDTEKS----------ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           + ++KN+      + +              +  K   +   F+S +  L     + ++  
Sbjct: 107 EEALKNVLAQRAAKVATQQNNQLTYQRQQQILAKGLGVRADFDSAKATLESAQAEINALD 166

Query: 150 SKVFNYGISSVYRSLKMKLTRMRS 173
           +++    I+     L +  T++ S
Sbjct: 167 AQIAQAEIAVNTAKLNLGYTKISS 190


>gi|157163064|ref|YP_001460382.1| membrane fusion protein family protein [Escherichia coli HS]
 gi|188495831|ref|ZP_03003101.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 53638]
 gi|312972135|ref|ZP_07786309.1| hlyD family secretion family protein [Escherichia coli 1827-70]
 gi|157068744|gb|ABV07999.1| membrane fusion protein (MFP) (TC 8.A.1) family [Escherichia coli
           HS]
 gi|188491030|gb|EDU66133.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 53638]
 gi|310334512|gb|EFQ00717.1| hlyD family secretion family protein [Escherichia coli 1827-70]
 gi|323939513|gb|EGB35721.1| HlyD family protein secretion protein [Escherichia coli E482]
          Length = 378

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|194218390|ref|XP_001916609.1| PREDICTED: phospholipase C, beta 3 (phosphatidylinositol-specific)
            [Equus caballus]
          Length = 1218

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 80/223 (35%), Gaps = 14/223 (6%)

Query: 84   LLTFEDIETTDLIDLKKV----------SIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            L+     +  DL +L+K            + +       E              EK  E 
Sbjct: 951  LVKLRSRQERDLRELRKKHQRKAVALTRRLLDGLAQARAEGRCRPRPGGLGGEDEKEEEK 1010

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
              +   +F  +   +  ++      +  +     L R     L  + L+  ++ L+ L  
Sbjct: 1011 EVKHYQEFQKRQVQSLLELREAQADTESKWRLEHL-RQAQQRLREVVLDAHTTQLKRLKE 1069

Query: 194  SHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            ++ ++   ++ + ++   N++S+    ++ +   + T   R +I E  N +R + E   +
Sbjct: 1070 TNDREKKELQKILDRKRHNSISEAKTREKHKKEAELTEINRRHITESVNSIRRLEEAQKQ 1129

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                     +++ + L + +     ++++    ++ R  + + 
Sbjct: 1130 RQERLVAGQQQVLQQLAEEEPKLLAQLAQECQEQRARLPQEVR 1172


>gi|190893535|ref|YP_001980077.1| multidrug efflux transporter protein [Rhizobium etli CIAT 652]
 gi|190698814|gb|ACE92899.1| putative multidrug efflux transporter protein [Rhizobium etli CIAT
           652]
          Length = 379

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 66/226 (29%), Gaps = 25/226 (11%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIH--EQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           A+++ D    +  V  +   L       E  ++     E   + ++   + L++ +   +
Sbjct: 96  ALARIDATDYQLAVKTAEANLAAAERGVETADLANKRAEQLFDKSVAPKSQLEQAALSHD 155

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q        +S L   +       + +   G +    +           P++  V     
Sbjct: 156 QAISQRDAALSALDQAKNQVSYTDLKAGQNGIVTAINAD-VGQVVGSGTPVVT-VAVDGE 213

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++  V    I   K G T    F     +        + ++     QQ         +
Sbjct: 214 KEVQIAVPENDIAEFKPGKTVKASFWADDKL---VLDGKVREVSGSADQQSRT------F 264

Query: 388 EVILKITDLAFSDNNIELRNGFPA--EVLFTAKNTTLAQEIIHPIT 431
            V + +       N+  +  G  A  E   +  N      +  P++
Sbjct: 265 AVRVSL------PNDPRVLLGMTATIEADISNGN----SYVSIPLS 300


>gi|134094823|ref|YP_001099898.1| putative RND divalent metal cation efflux membrane fusion protein
           (czcBlike) [Herminiimonas arsenicoxydans]
 gi|133738726|emb|CAL61773.1| putative Secretion protein HlyD (partial Cobalt-zinc-cadmium
           resistance protein CzcB) [Herminiimonas arsenicoxydans]
          Length = 404

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 62/205 (30%), Gaps = 18/205 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E +  +  + L     E++  L       ++  L+    L+E    ++   +  A   
Sbjct: 144 RSELLSAQKRMALARLTFEREKKLWEEKISAEQDYLQAQQTLRESEIAVQNASQKLAALG 203

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +  +       +  I +P  G +V     +     ++   +  I       +    V+ K
Sbjct: 204 A-GSGSSGAFNRYEIRAPFDGMVVAKHI-ALGEAVKEDADIFTIS-DLSSVWAEIAVSAK 260

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  V+ G    V+   +           I  +  ++ +Q                  + 
Sbjct: 261 DLNAVRVGEKVIVKASAFDSS----ASGTIAYVGSLLGEQTRTA-----------TARVT 305

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTL 422
            ++     R G    +   A  T++
Sbjct: 306 LANPQGTWRPGLFVSIEIVAGETSV 330



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 40/107 (37%), Gaps = 5/107 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL- 95
             I  ++   GEI   ++    +    SG+++    + G Q+ +G  L        ++  
Sbjct: 85  ANIRTTLILPGEIQFNEDRTAHVVPRLSGVVQSVAADLGQQVKKGQVLAVIASTGLSEQR 144

Query: 96  IDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLL 139
            +L     +     +  E+      + ++ + D L+     RE ++ 
Sbjct: 145 SELLSAQKRMALARLTFEREKKLWEEKISAEQDYLQAQQTLRESEIA 191


>gi|148265385|ref|YP_001232091.1| RND family efflux transporter MFP subunit [Geobacter uraniireducens
           Rf4]
 gi|146398885|gb|ABQ27518.1| efflux transporter, RND family, MFP subunit [Geobacter
           uraniireducens Rf4]
          Length = 410

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 86/280 (30%), Gaps = 49/280 (17%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E   D +       S       +S+  S+           +   +   +    +  L+  
Sbjct: 93  EANADRIAHVSPRISGKIVSVKASLGDSVSAGQALATLDSVELGEALGRYHQSKTKLALA 152

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q ++  +KNL EK   ++ D+ Q E     +  EL  +                      
Sbjct: 153 QSNMDRIKNLVEKKIAARKDILQAETDYKTAQTELHTD---------------------- 190

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                      E+    +    S L      +    + SPI+G I    +      A  S
Sbjct: 191 -----------EERLSLYGVAASDLKGESHKKPLLPVRSPISGIITEKHAI-VGELADPS 238

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + L   V      ++   V  K +  V+KG  A V    + D++    K  I  I  ++ 
Sbjct: 239 KSL-YTVADLSSVWVMVDVNEKDLAKVRKGQAAIVSVGAFPDLK---LKGRITYIADLVD 294

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +    +      +  +++     ++   +L+    A V  
Sbjct: 295 EATRTV------KARIEV-----ANPGRKLKPEMFATVEL 323



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 44/122 (36%), Gaps = 2/122 (1%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            +   +S++G++    + +   SP  SG I   +   G  +  G  L T + +E  + + 
Sbjct: 81  RLAGVISATGKVEANADRIAHVSPRISGKIVSVKASLGDSVSAGQALATLDSVELGEALG 140

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            +    K       +    +  L  K     K     E        + H+   ++  YG+
Sbjct: 141 -RYHQSKTKLALAQSNMDRIKNLVEKKIAARKDILQAETDYKTAQTELHTDEERLSLYGV 199

Query: 158 SS 159
           ++
Sbjct: 200 AA 201


>gi|332142071|ref|YP_004427809.1| HlyD family secretion protein [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327552093|gb|AEA98811.1| HlyD family secretion protein [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 376

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 1/140 (0%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGII++  VE G  + +G  L   +       +   +  +K +   ++            
Sbjct: 99  SGIIEEIFVEEGDYVEKGQVLAQLDKRRYELNLSKAQADLKGIESELEKVNKVYSQKLIS 158

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLE 182
            D  +K     E                     I         K+  +  S    R+   
Sbjct: 159 DDTYDKLTSQFESAKASVRLAELDLKEATITAPIDGYIAERNAKVGNLTESFQRERMFHI 218

Query: 183 NKSSLLRALLSSHQKDLTMM 202
            +   L+ ++   + +L  +
Sbjct: 219 VQQRNLQGIVYLPENELPNV 238



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 80/213 (37%), Gaps = 29/213 (13%)

Query: 206 FEKN-AVSQNDLNQQ--ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            E+   V +  +  Q  +R    +  + + ++   ++ L  +N++Y +  +    Y K  
Sbjct: 107 VEEGDYVEKGQVLAQLDKRRYELNLSKAQADLKGIESELEKVNKVYSQKLISDDTYDK-- 164

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLMK 320
                     F    + + + E   ++ TI +PI G I   ++    N  +    + +  
Sbjct: 165 ------LTSQFESAKASVRLAELDLKEATITAPIDGYIAE-RNAKVGNLTESFQRERMFH 217

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           IV   +       +   ++ +V  G  AT+     +D       A +E+I P+I      
Sbjct: 218 IV-QQRNLQGIVYLPENELPNVVIGQGATLTIAALSDR---SISANVERISPVIDATTGT 273

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                 ++V LK+      + +  L+ G   +V
Sbjct: 274 ------FKVTLKVP-----NQDNMLKAGMFTDV 295


>gi|191165234|ref|ZP_03027077.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B7A]
 gi|218556147|ref|YP_002389060.1| membrane fusion protein (MFP) component of efflux pump [Escherichia
           coli IAI1]
 gi|256020937|ref|ZP_05434802.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Shigella sp. D9]
 gi|307314619|ref|ZP_07594219.1| secretion protein HlyD family protein [Escherichia coli W]
 gi|332282159|ref|ZP_08394572.1| inner membrane protein yiaV [Shigella sp. D9]
 gi|190904636|gb|EDV64342.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B7A]
 gi|218362915|emb|CAR00550.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli IAI1]
 gi|306905832|gb|EFN36356.1| secretion protein HlyD family protein [Escherichia coli W]
 gi|315062873|gb|ADT77200.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli W]
 gi|323182747|gb|EFZ68149.1| hlyD family secretion family protein [Escherichia coli 1357]
 gi|323376536|gb|ADX48804.1| secretion protein HlyD family protein [Escherichia coli KO11]
 gi|332104511|gb|EGJ07857.1| inner membrane protein yiaV [Shigella sp. D9]
          Length = 378

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|301764907|ref|XP_002917869.1| PREDICTED: LOW QUALITY PROTEIN: myosin-14-like [Ailuropoda
            melanoleuca]
          Length = 1995

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 68/211 (32%), Gaps = 22/211 (10%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +        +  I+ L  H++ E+ A   L  +    E   +  EE LL           
Sbjct: 958  QLQSDKKRLQQHIQELESHLEAEEGARQKLQLEKVTTEAKLKKFEEDLL----------- 1006

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             +     + + +  K+   R+        + E K   L  L   ++  +  M++   K  
Sbjct: 1007 -LLEDQNAKLSKERKLLEERLAEFSSQAAEEEEKVKSLNKLRLKYEATIADMEDRLRKEE 1065

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD----- 265
              + +L + +R +   + EL+E + EQ+     +         E    L  +  +     
Sbjct: 1066 KGRQELEKLKRRLDGESSELQEQMAEQQQRREELRAQLGRKEEELQAALARVEEEDGARA 1125

Query: 266  -----LEQNQRTFADEMSKLTILEKTREQKT 291
                 L + Q   A+    L      R +  
Sbjct: 1126 LLLKSLREAQAGLAEAQEDLEAERVARAKAE 1156



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 67/190 (35%), Gaps = 3/190 (1%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLG 143
            L  +  E  D +   + +   L   +   K+  +  L  + +  E+      +QL D   
Sbjct: 1560 LRAQVTELEDELTAAEDAKLRLEVTLQALKAQHERDLQGRDEAGEERRRQLAKQLRDAEV 1619

Query: 144  KYHSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            +      +  +       +   L+    +  +    + +   +   ++A +    +++  
Sbjct: 1620 ERXEERKQRALAVAARKKLEAELEDLRAQNAAAAQGKEEAGKQLRKMQAQMKELWREVEE 1679

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             ++  E+      +  ++ + +    L L+E +       R I +  DE   E AN    
Sbjct: 1680 SRSSREEIFAQNRESEKRLKALETEVLRLQEELAASDRARRQIQQERDEMADELANGSLS 1739

Query: 262  ISRDLEQNQR 271
             +  LE+ ++
Sbjct: 1740 KAAVLEEKRQ 1749



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 77/219 (35%), Gaps = 16/219 (7%)

Query: 88   EDIETTDLIDLK-KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL------LD 140
            ED+E   +   K +   ++L   ++  +S L+   +  +  ++    RE+++      L+
Sbjct: 1143 EDLEAERVARAKAEKQRRDLGEELEALRSELEDTLDSTNTQQELRSKREQEVTELKKALE 1202

Query: 141  FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI----YLNRLDLENKSSLLRALLSSHQ 196
               + H    +            L  +L + R         RL LE + S LR+ LSS Q
Sbjct: 1203 EETRVHEVAVQELRQRHGQALGELVEQLEQARRSKGTWEKTRLALETEVSELRSELSSLQ 1262

Query: 197  ----KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
                +     + L  +    Q      ER   ++T +L+    E +N+   ++E    A 
Sbjct: 1263 ASRHEGEQRRRRLESQLQEVQGRAGDGERARAEATEKLQRVQAELENVSGALSEAESRA- 1321

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +  +  L      L   Q    +E      L        
Sbjct: 1322 IRLSKELSSSEAQLHDAQEMLQEESRAKLALGSRARALE 1360



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 61/186 (32%), Gaps = 6/186 (3%)

Query: 107  RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSL 164
               +   +  L  L ++   L K  +  EE+L +F  +      KV   N        ++
Sbjct: 995  EAKLKKFEEDLLLLEDQNAKLSKERKLLEERLAEFSSQAAEEEEKVKSLNKLRLKYEATI 1054

Query: 165  KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                 R+R     R +LE     L    S  Q+ +   +   E+    +  L ++E  + 
Sbjct: 1055 ADMEDRLRKEEKGRQELEKLKRRLDGESSELQEQMAEQQQRREE---LRAQLGRKEEELQ 1111

Query: 225  KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
             +   + E    +  +L+ + E          +   E      + ++   D   +L  L 
Sbjct: 1112 AALARVEEEDGARALLLKSLREAQAGLAEAQEDLEAE-RVARAKAEKQRRDLGEELEALR 1170

Query: 285  KTREQK 290
               E  
Sbjct: 1171 SELEDT 1176


>gi|269121891|ref|YP_003310068.1| efflux transporter RND family, MFP subunit [Sebaldella termitidis
           ATCC 33386]
 gi|268615769|gb|ACZ10137.1| efflux transporter, RND family, MFP subunit [Sebaldella termitidis
           ATCC 33386]
          Length = 336

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 60/201 (29%), Gaps = 25/201 (12%)

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE------QNQRTFADE 276
           V K  L L  +  + ++     +  Y  A +E+        + L         +  F   
Sbjct: 77  VQKGQLILAIDDQQTRSSQMSASSEYSIAKVEYDKMRTLYEKRLVTETDYFAAKSRFDSA 136

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + L     +  +  I + ++G I            +    L  +V       +   V  
Sbjct: 137 AANLAATNDSVNRTIIRADVSGVISGLNLKQYQE-IRVGDTLFTLV-SEDTMELEIGVPA 194

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             I  +  G    V+         K+ +A + ++ P              + + ++I   
Sbjct: 195 NTISMIHIGSAVKVKVSEIN----KEVEAFVSEVSPAADPVTRQ------FLIKVRIP-- 242

Query: 397 AFSDNNIELRNGF--PAEVLF 415
              + + EL+ G    A V  
Sbjct: 243 ---NPDRELKKGMYGVASVDL 260



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 37/121 (30%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K    +NG  + +G  +L  +D +T              +   D  ++  +     
Sbjct: 63  SGTLKIINFKNGDYVQKGQLILAIDDQQTRSSQMSASSEYSIAKVEYDKMRTLYEKRLVT 122

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                 A    +    +      S    +    +S V   L +K  +   +      L +
Sbjct: 123 ETDYFAAKSRFDSAAANLAATNDSVNRTIIRADVSGVISGLNLKQYQEIRVGDTLFTLVS 182

Query: 184 K 184
           +
Sbjct: 183 E 183


>gi|160332467|dbj|BAF93224.1| myosin heavy chain fast skeletal type 3 [Hypophthalmichthys molitrix]
          Length = 1932

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 77/199 (38%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K  ++ ++ L ++  KY    +++   G  
Sbjct: 1413 LEKTKQRLQAEVEDLMIDVERANGLAANLDKKQKNFDKVLAEWKQKYEEGQAEL--EGAQ 1470

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   L+    + Q++++ +     +     ++L +
Sbjct: 1471 KEARSLSTELFKMKNSYEESLD---QLETLKRENKNLQQEISDLTEQLSETGKGIHELEK 1527

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      EI R L +          
Sbjct: 1528 AKKTVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEMEQIKR 1587

Query: 278  --SKLTILEKTREQKTILS 294
               ++    ++     + S
Sbjct: 1588 NSQRIIESMQSTLDSEVRS 1606



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 78/217 (35%), Gaps = 15/217 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +F  K 
Sbjct: 1205 QIDNLQRVKQKLEKEKS--GYKMEIDDLSSNMEAVAKAKGNLEKMCRTLEDQLSEFKSKN 1262

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++         F        R L+ K   +  +   +     +   L+  +    
Sbjct: 1263 DENSRQINDLSAQRARFQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRHIEEEV 1322

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1323 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYEVDAIQRT 1382

Query: 257  NYLKEISRDLEQNQRTFADEMS----KLTILEKTREQ 289
              L+E  + L Q  +   +++     K   LEKT+++
Sbjct: 1383 GELEESKKKLAQRLQEAEEQVEAVNSKCASLEKTKQR 1419



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 71/267 (26%), Gaps = 48/267 (17%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID-TEKSALDFLNNKYDVLEKAFESR 134
                +G   +  +         L +  I+ LR  ++ TE+          D+ E+     
Sbjct: 1657 DDAQRGQEDMKEQVAMVERRNALMQSEIEELRAALEQTERGRKVAEQELVDISERVGLPH 1716

Query: 135  -------------EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL--TRMRSIYLNRL 179
                         E  L+    +   T  +  N    +        L    ++       
Sbjct: 1717 SQNTSLLNTKKKLEADLVQIQSEVDDTVQEARNAEEKAQKAITDAALVAEELKKEQDTSS 1776

Query: 180  DLENKSSLLRALLSSHQKDLTMMKNLFEKN-------AVSQNDLNQQE------------ 220
             LE     L   +   Q  L   +NL  K          S+    + E            
Sbjct: 1777 HLERMKKNLEVTVKDLQHRLDEAENLAMKGGKKQLQKLESRVRELETEVEAEQRRGADAV 1836

Query: 221  ---RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----------DLE 267
               R   +   EL     E K  +  + +L D+  L+   Y ++              L 
Sbjct: 1837 KGVRKYERRVKELTYQTDEDKKNVARLQDLVDKLQLKVKVYKRQSEEAEEQANGYLSKLR 1896

Query: 268  QNQRTFADEMSKLTILEKTREQKTILS 294
            + Q    +   +  I E    +  + S
Sbjct: 1897 KVQHELEEAEERADISESQVNKLRVKS 1923


>gi|149186548|ref|ZP_01864860.1| heavy metal RND efflux membrane fusion protein, CzcB family protein
           [Erythrobacter sp. SD-21]
 gi|148829775|gb|EDL48214.1| heavy metal RND efflux membrane fusion protein, CzcB family protein
           [Erythrobacter sp. SD-21]
          Length = 503

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 38/148 (25%), Gaps = 32/148 (21%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           T+ +P +G I               Q L +I       ++ A V        + G   + 
Sbjct: 220 TVTAPQSGAITSLGVR-PGMTVMAGQSLAEIS-GYSPIWLEAAVPEALAGSARVGQPVSA 277

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
               +   R   F   I  I P   +    +               A  +  + L+ G  
Sbjct: 278 TLTAFPGER---FAGRIIAILPSAQEASRTITV-----------RAAMPNPGLRLKPGMF 323

Query: 411 AEVL----------------FTAKNTTL 422
           A+V+                      TL
Sbjct: 324 AQVMIAPERREALLIPSEAVIRTGERTL 351


>gi|150377304|ref|YP_001313899.1| secretion protein HlyD family protein [Sinorhizobium medicae
           WSM419]
 gi|150031851|gb|ABR63966.1| secretion protein HlyD family protein [Sinorhizobium medicae
           WSM419]
          Length = 409

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 57/164 (34%), Gaps = 1/164 (0%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +      V I    +G + +  V+   ++  G PL   +D E    ++  +  +  +   
Sbjct: 68  VTAVFRTVTIMPESTGRVAEVYVDLNEKVPAGAPLFRLDDSEQRAALETARRRVSEIEAE 127

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
               +S L   +      E  +     +L   +       + V    I  +  ++  +  
Sbjct: 128 AIVARSELASADGLIAQAEGDYLQALNELETQVELNERNPNIVARREIERLQVAVDGRDG 187

Query: 170 RMRSIYLNRLDLENK-SSLLRALLSSHQKDLTMMKNLFEKNAVS 212
              +   N+  LE K +SLL A  +S +  L   +   +K  V 
Sbjct: 188 ARAASISNKRTLETKIASLLPAQKASAEAALNQAQVELDKTIVR 231


>gi|75910043|ref|YP_324339.1| secretion protein HlyD [Anabaena variabilis ATCC 29413]
 gi|75703768|gb|ABA23444.1| Secretion protein HlyD [Anabaena variabilis ATCC 29413]
          Length = 439

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 69/211 (32%), Gaps = 3/211 (1%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
              +     +++F     ++     +     R      +  +  +   +A L +    L 
Sbjct: 97  LQPRVQGQVTQIFVRSGDAIASGAAVIQIDPRQQQAAVISNDAATQASKAQLENANATLK 156

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            ++     N V+   LNQQE   Y +  +      + K+   +             + ++
Sbjct: 157 SLEAERLSN-VADVRLNQQEYDRYTTLADQGAVSRQTKDQYANRLATARANLNAIESRIQ 215

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                + Q Q++     +     +   +   I +P  GT+         ++   S PL+ 
Sbjct: 216 AQKASVAQAQKSVQQAQANTDEQQVQLQFYRITAPFEGTVGNIPI-KIGDFVNSSTPLLT 274

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I   ++   +   V  ++   +++G    + 
Sbjct: 275 IT-QNRPLEVNISVPLERGSQLRQGMPVEIM 304



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 50/156 (32%), Gaps = 5/156 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               V ++    G + +  V +G  I  G  ++  +  +    +     + +  +  ++ 
Sbjct: 91  SRRSVTLQPRVQGQVTQIFVRSGDAIASGAAVIQIDPRQQQAAVISNDAATQASKAQLEN 150

Query: 113 EKSAL-----DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             + L     + L+N  DV     E      L   G         +   +++   +L   
Sbjct: 151 ANATLKSLEAERLSNVADVRLNQQEYDRYTTLADQGAVSRQTKDQYANRLATARANLNAI 210

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +R+++   +    +      +A     Q  L   +
Sbjct: 211 ESRIQAQKASVAQAQKSVQQAQANTDEQQVQLQFYR 246


>gi|33602827|ref|NP_890387.1| HlyD family secretion protein [Bordetella bronchiseptica RB50]
 gi|33577269|emb|CAE35826.1| probable HlyD-family secretion protein [Bordetella bronchiseptica
           RB50]
          Length = 368

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 75/237 (31%), Gaps = 23/237 (9%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               R ++   + D  + +  FE   AV    +  Q         +L     + +N    
Sbjct: 62  LQASRQVVIPAEVDGRIARIAFESGQAVRAGQVLAQLND-APEQGDLARLQAQLRNARSV 120

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +         + A      +  L+Q +  +     ++  ++   EQK + +P  G ++  
Sbjct: 121 LERTRRLVPQQAA-----TAEQLDQARAAYDQAAGEVRRVQALVEQKQVKAPFDG-VLGV 174

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +      + +  +P++ +   ++  Y    +  + ++ ++ G   +V    Y       F
Sbjct: 175 RRVDLGQFVRAGEPVVSLT-DARTMYADITLPEQALRDIRTGQAVSVGVDAYPGR---AF 230

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             ++  I+P +S Q               +      + +  L  G            
Sbjct: 231 DGVVSTIEPQVSAQ-----------ARTLLVRATLPNPDGVLAPGMYVNARVALPER 276



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 42/128 (32%), Gaps = 1/128 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V+ +G    + +   +      G I +   E+G  +  G  L    D      +   +  
Sbjct: 54  VTLAGIGTLQASRQVVIPAEVDGRIARIAFESGQAVRAGQVLAQLNDAPEQGDLARLQAQ 113

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           ++N R  ++  +  +       + L++A  + ++   +          K        V  
Sbjct: 114 LRNARSVLERTRRLVPQQAATAEQLDQARAAYDQAAGEVRRVQALVEQKQVKAPFDGVLG 173

Query: 163 SLKMKLTR 170
             ++ L +
Sbjct: 174 VRRVDLGQ 181


>gi|16759814|ref|NP_455431.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29142413|ref|NP_805755.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|56414006|ref|YP_151081.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197362929|ref|YP_002142566.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|213428025|ref|ZP_03360775.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213852860|ref|ZP_03382392.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289825004|ref|ZP_06544367.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25512434|pir||AE0609 probable exported protein ybjY [imported] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16502107|emb|CAD05343.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138043|gb|AAO69604.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56128263|gb|AAV77769.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094406|emb|CAR59922.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 372

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  L      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATELAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKINDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 68/174 (39%), Gaps = 17/174 (9%)

Query: 18  KRMTLLSIIGIIGLITW-SILLPI-------------EISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+++W  I  P+             E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMVSWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G  + +   L   +  +  + I   + ++  L    + +++A +    +
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNA--ERQQAAAELKLAR 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +   ++ + +        +T   V    I ++   +K     + +   N
Sbjct: 128 VTLARQQQLAKTQAVSQQDLDTAATELAVKQARIGTIDAQIKRNRASLDTAKTN 181


>gi|298206980|ref|YP_003715159.1| Secretion protein HlyD [Croceibacter atlanticus HTCC2559]
 gi|83849614|gb|EAP87482.1| Secretion protein HlyD [Croceibacter atlanticus HTCC2559]
          Length = 401

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 71/200 (35%), Gaps = 8/200 (4%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           ++ + L+L+      + ++ S + +  + +   ++       +N+ + +       + + 
Sbjct: 99  LFNHYLELQGSVETKQNIVISPEYNGLLERIYVKEG----QRVNKGQLLAKIDDGGISQQ 154

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           + + +  L  + +   E              +  Q +  +  + + +  +     + TI 
Sbjct: 155 LAQMETQLA-LAKTTFERRQRLWEQNIGSEIEYLQAKAQYEGQQNSVAQMRSQVGKTTIR 213

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQP-LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +P +GTI               Q  +M++V      YI A++    +  V +    T+ F
Sbjct: 214 APFSGTIEDV-IAEQGTVVASGQTQIMRLVSLED-MYIEAEIPEDYLTSVSENTPVTINF 271

Query: 353 PHYADIREKKFKAIIEKIDP 372
           P      + K +     I P
Sbjct: 272 PILNKTVDSKVRQASNYISP 291



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 54/142 (38%), Gaps = 7/142 (4%)

Query: 47  SGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
            G +  + N   + SP  +G++++  V+ G ++ +G  L   +D   +  +   +  +  
Sbjct: 107 QGSVETKQN--IVISPEYNGLLERIYVKEGQRVNKGQLLAKIDDGGISQQLAQMETQLAL 164

Query: 106 LRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKY-HSTCSKVFNYGISSVY 161
            +   +  +   +       +Y   +  +E ++  +     +   +T    F+  I  V 
Sbjct: 165 AKTTFERRQRLWEQNIGSEIEYLQAKAQYEGQQNSVAQMRSQVGKTTIRAPFSGTIEDVI 224

Query: 162 RSLKMKLTRMRSIYLNRLDLEN 183
                 +   ++  +  + LE+
Sbjct: 225 AEQGTVVASGQTQIMRLVSLED 246



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 99/294 (33%), Gaps = 16/294 (5%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM--RSIYLNRLD---LENKSSLLRALLS 193
           L+  G   +  + V +   + +   + +K  +   +   L ++D   +  + + +   L+
Sbjct: 104 LELQGSVETKQNIVISPEYNGLLERIYVKEGQRVNKGQLLAKIDDGGISQQLAQMETQLA 163

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI--NELYDEA 251
             +      + L+E+N  S+ +  Q +         + +   +          +   ++ 
Sbjct: 164 LAKTTFERRQRLWEQNIGSEIEYLQAKAQYEGQQNSVAQMRSQVGKTTIRAPFSGTIEDV 223

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY-NQSFSSSN 310
             E    +      +     +  D   +  I E      +  +P+  TI +   + +  +
Sbjct: 224 IAEQGTVVASGQTQI-MRLVSLEDMYIEAEIPEDYLTSVSENTPV--TINFPILNKTVDS 280

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +Q+     I P ++   I   V  K  + +K   TA ++   Y   +       +   
Sbjct: 281 KVRQASN--YISPSNRTFRIEVAVPNKD-KSIKPNLTARLKINDYTSEKALLIPLSVISE 337

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFP-AEVLFTAKNTTL 422
           +    Q     + ++      +I +   S   NIE+ +G    + +      T+
Sbjct: 338 NADGEQYVYIAEGEDTPVAKRQIIETGRSQGQNIEVLSGLSNGDFVIKEGARTV 391


>gi|219667601|ref|YP_002458036.1| efflux transporter RND family, MFP subunit [Desulfitobacterium
           hafniense DCB-2]
 gi|219537861|gb|ACL19600.1| efflux transporter, RND family, MFP subunit [Desulfitobacterium
           hafniense DCB-2]
          Length = 413

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 92/290 (31%), Gaps = 38/290 (13%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +++    G   S    +     SS+      K    + + +  ++ E+   L +    + 
Sbjct: 88  QEIPVKAGDKVSKGQIILVMDTSSLSVEASQKDLECKELRVKIINSESNIRLFQQAYDTA 147

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           QKD    K L E  A S  +L Q  + V ++   L   + EQ+  L  +     +A + +
Sbjct: 148 QKDYNNTKVLMESGAASLKELEQAGQKVTEAQENL---VVEQEANLPLLKAQLKQAEVLY 204

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                       ++  ++ TI SP  GT++     +     +  
Sbjct: 205 QK-------------------------AQEKLQKATIHSPYDGTVLNLAVKA-GQEVENG 238

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L +I  +     I   +       +K G    +         ++     IE I P   
Sbjct: 239 TLLAQIG-NPAQLLIETGINEVDAALLKVGDQVEITNSAL---LKEPLLGSIETIAPTAE 294

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE--VLFTAKNTTLA 423
               +   Q   ++ + +     ++    L+ GF     V+   K   L 
Sbjct: 295 VVATSQGEQTQVKIRISVPA---TEGESPLKPGFNVNLKVILQQKEQALL 341



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 63/157 (40%), Gaps = 5/157 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E +V +SG++  + ++ E K+     +++  V+ G ++ +G  +L  +    +     K 
Sbjct: 62  EQNVFASGKLEVK-DLAEFKADTKTTVQEIPVKAGDKVSKGQIILVMDTSSLSVEASQKD 120

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  K LR  I   +S +      YD  +K + + +      +    ++  ++   G    
Sbjct: 121 LECKELRVKIINSESNIRLFQQAYDTAQKDYNNTK----VLMESGAASLKELEQAGQKVT 176

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                + + +  ++ L +  L+    L +      QK
Sbjct: 177 EAQENLVVEQEANLPLLKAQLKQAEVLYQKAQEKLQK 213


>gi|320159234|ref|YP_004191612.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio vulnificus MO6-24/O]
 gi|319934546|gb|ADV89409.1| membrane fusion component of tripartite multidrug resistance system
           [Vibrio vulnificus MO6-24/O]
          Length = 354

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 67/212 (31%), Gaps = 21/212 (9%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             S  ++ +   +     SL+  L +  ++Y  R       +  +A   +  ++   ++ 
Sbjct: 72  LFSIDARKYRIALEQAKLSLQSALEKEATLYSQREAALANIARAQATYDNAHREYLRLQK 131

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L  +  +S++ L                   +       +     +A  +  N ++    
Sbjct: 132 LSTQQVISRSSL-------------------DNAFAQNQVANANLKAEQQSLNVIEAQLG 172

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
             E          + +   +       +L+P  G +   Q     + A  +QPL+  +P 
Sbjct: 173 QGEGQSTAVRVAQNGIEKAQLDLANTQVLAPSDGVVTNLQL-EVGSMANANQPLLTFIPT 231

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
               ++      K +  V   Y A V F  Y 
Sbjct: 232 GS-LWVTGDFREKSVAKVDDRYHAMVAFDAYP 262



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 73/206 (35%), Gaps = 19/206 (9%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
            I+  I L  + IL      +++ G +  +  VV++    SG + + Q+ N   + QG  
Sbjct: 14  LIVLFIALFFYIILADQHAPITTEGRV--QGYVVQVAPEVSGKVTQVQIHNNQHVQQGDV 71

Query: 84  LLTFEDIETTDLIDLKKVSIKNLR------------CHIDTEKSALDFLNNKYDVLEKAF 131
           L + +  +    ++  K+S+++                 +  ++   + N   + L    
Sbjct: 72  LFSIDARKYRIALEQAKLSLQSALEKEATLYSQREAALANIARAQATYDNAHREYLRLQK 131

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            S ++ +           ++V N  + +  +SL +   ++               + +  
Sbjct: 132 LSTQQVISRSSLDNAFAQNQVANANLKAEQQSLNVIEAQLGQGEGQ----STAVRVAQNG 187

Query: 192 LSSHQKDLTMMKNLF-EKNAVSQNDL 216
           +   Q DL   + L      V+   L
Sbjct: 188 IEKAQLDLANTQVLAPSDGVVTNLQL 213


>gi|304388285|ref|ZP_07370401.1| possible secretion protein [Neisseria meningitidis ATCC 13091]
 gi|304337716|gb|EFM03869.1| possible secretion protein [Neisseria meningitidis ATCC 13091]
          Length = 238

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 73/236 (30%), Gaps = 36/236 (15%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S    T  + I  + +I + I        +  G+IL    V+ + +P +G I    
Sbjct: 28  TRPLSFSLWTTFASISALLIILFLIFGNYTRKTTVEGQILPASGVIRVYAPDTGTITAKF 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE+G ++  G  L                                 D +  +        
Sbjct: 88  VEDGEKVKAGDKLFALSTSRFGAG----------------------DSVQQQLKTEAVLK 125

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           ++  EQ L  L   H   ++     +  +                 +L +  +    +  
Sbjct: 126 KTLAEQELGRLKLIHGNETRSLKATVERLENQ--------------KLHILQQIDGQKRR 171

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           +   ++ L   + L   +AV + ++   +  + +   +L     E+  +L+ I   
Sbjct: 172 IRLAEEMLQKYRFLSANDAVPKQEMMNVKAELLEQKAKLDAYRREEVGLLQEIRTQ 227


>gi|254516524|ref|ZP_05128583.1| HlyD family secretion protein [gamma proteobacterium NOR5-3]
 gi|219674947|gb|EED31314.1| HlyD family secretion protein [gamma proteobacterium NOR5-3]
          Length = 456

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 10/135 (7%)

Query: 11  RNHPASLKRMTL-----LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           ++  A L R          ++ I  L      LP+ +SV +  E++   N   ++SP  G
Sbjct: 176 QDVNAPLWRRVWRQPMTWLVLAIACL----AFLPVRLSVLAPAELVPV-NPEVVRSPLDG 230

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++++  VE   ++  G PL  F+    +  + + + ++  LR                  
Sbjct: 231 VVERVLVEPNQRVDAGEPLFEFDRAAISSQLQVAERTLDTLRAEYRQRGQQAVVDGESRS 290

Query: 126 VLEKAFESREEQLLD 140
            L       +EQ  +
Sbjct: 291 ALAVISGRMKEQQAE 305



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 23/221 (10%), Positives = 65/221 (29%), Gaps = 14/221 (6%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
               ++  E +       +   +   +  L  +   Y +   + A    E    L     
Sbjct: 239 PNQRVDAGEPLFEFDRAAISSQLQVAERTLDTLRAEYRQ-RGQQAVVDGESRSALAVISG 297

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS-SSNYAQQSQPLMKIVPHSKLTYI 330
              ++ +++  L+   E+  +L+   G ++ +   +         + ++ I  + +   +
Sbjct: 298 RMKEQQAEVDYLQALAERGMVLAGSDGVVILDDPTAWVGRPVVTGERVLLIA-NEQDAEL 356

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A V P  +  ++      +              AI  ++  +         +   Y   
Sbjct: 357 EAWVAPDDLIELRDDDPVKLYLNA------DPLNAIPARLRYLAYSATERPDSSFAYRAR 410

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII-HPI 430
             +      D  I L+         + K   L   ++  P+
Sbjct: 411 ATLETQQRPDLRIGLK----GTAKLSGKRVALWYYLLRKPL 447


>gi|149919326|ref|ZP_01907808.1| hypothetical protein PPSIR1_03898 [Plesiocystis pacifica SIR-1]
 gi|149819826|gb|EDM79250.1| hypothetical protein PPSIR1_03898 [Plesiocystis pacifica SIR-1]
          Length = 322

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 46/123 (37%), Gaps = 7/123 (5%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           +    +S+I ++  + ++    +    +    + +E   + + +P SG I+   V  G +
Sbjct: 44  RWAVRVSVIVLVFAVVFAGTARVGEYATGIAVVRHEG-RIVVTTPVSGTIQAMSVSPGQR 102

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE------KSALDFLNNKYDVLEKAF 131
           +  G  L   +D      +   + + +     +  E      +  L  L+++        
Sbjct: 103 VRAGQVLAHLDDAAQRAELQRVQNNYEQRLLELLREPGDSARRDRLAALDSELQRARAEL 162

Query: 132 ESR 134
           E+R
Sbjct: 163 EAR 165



 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 31/97 (31%), Gaps = 8/97 (8%)

Query: 232 ENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQ-----NQRTFADEMSKLTILE 284
                   +L H+++    A L+    NY + +   L +      +   A   S+L    
Sbjct: 100 GQRVRAGQVLAHLDDAAQRAELQRVQNNYEQRLLELLREPGDSARRDRLAALDSELQRAR 159

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
              E + +L+P  G +   +             +  I
Sbjct: 160 AELEARAVLAPEDGLVSDVRVR-PGQLLSPGDSVCSI 195


>gi|29655097|ref|NP_820789.1| ABC transporter periplasmic substrate-binding protein [Coxiella
           burnetii RSA 493]
 gi|29542366|gb|AAO91303.1| macrolide-specific efflux protein [Coxiella burnetii RSA 493]
          Length = 391

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 89/285 (31%), Gaps = 33/285 (11%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           L     T +K+F    +SV  +  +     + +  +  D   K    +    +  K    
Sbjct: 64  LSPVDGTVTKLFFTYGASVEENQNIVEIHSQKLAEDYRDAVTKYLQAKDTYETSLKSFAG 123

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L+E   +S+ +  + ER  + + +               +N       LE      +
Sbjct: 124 TRALYEAGIISEEEF-RTERSQHDTNV---------------LNFYQARFTLEKVLREAD 167

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV----------YNQSFSSSNY 311
           I     +  R  AD  +   IL+K      + SP  G  +                    
Sbjct: 168 IDPKTVEGLR-IADINAVAQILQKHFRHILVKSPGKGVALFPVKSEDDKDGKGQLVVGTE 226

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +Q Q ++ I        I  +V+   I  +  G  ATV    +  I       I+  + 
Sbjct: 227 VKQGQLILSIG-DLSGFTITLQVSEININRLHSGLKATVTGDAFPGIT---LHGIVTAVA 282

Query: 372 PIIS-QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              + +Q         + + +++  +     N+ +  G  A V  
Sbjct: 283 RQSNPEQSEGDGALSTFNIEVQVPGVTKEQRNV-IHVGMSATVEI 326


>gi|323496675|ref|ZP_08101726.1| efflux transporter, RND family, MFP subunit [Vibrio sinaloensis DSM
           21326]
 gi|323318257|gb|EGA71217.1| efflux transporter, RND family, MFP subunit [Vibrio sinaloensis DSM
           21326]
          Length = 395

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 72/210 (34%), Gaps = 22/210 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL-EQN 269
           V++ DL  Q     ++  EL +           ++ +      +  +   +   +L +Q 
Sbjct: 81  VNKGDLIAQ-LDDAQARAELDKAKSSLALAESKLDRVLALLKKQPDSMSAQDVEELKQQA 139

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               AD   K T      +   +++P  G  + N + S  +  + +  L+ ++       
Sbjct: 140 NLARADFRQKKT----DLQNYQLVAPFNGQ-LTNFTHSVGSRVEAATALVSLIKLD-PVE 193

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   ++  ++   + G   ++    Y +     F   +  I P++ +             
Sbjct: 194 VHYSISQNEVGKAQLGQPVSISVDAYPNQ---SFVGKVNYIAPLVDESSG---------- 240

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            ++I      + N +L  G  A+V  T   
Sbjct: 241 RVEI-HAHLENQNNQLVPGMFAKVSQTVGK 269



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 5/125 (4%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K    E+G Q+ +G  +   +D +    +D  K S+      +D   + L        +
Sbjct: 70  LKALNFEDGDQVNKGDLIAQLDDAQARAELDKAKSSLALAESKLDRVLALLK--KQPDSM 127

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             +  E  ++Q       +    + + NY + + +     +LT       +R++      
Sbjct: 128 SAQDVEELKQQANLARADFRQKKTDLQNYQLVAPFN---GQLTNFTHSVGSRVEAATALV 184

Query: 187 LLRAL 191
            L  L
Sbjct: 185 SLIKL 189


>gi|281420032|ref|ZP_06251031.1| secretion protein HlyD [Prevotella copri DSM 18205]
 gi|281405832|gb|EFB36512.1| secretion protein HlyD [Prevotella copri DSM 18205]
          Length = 406

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 41  EISVSSSGEILNEDNVV-EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + +++++G+++       ++ S   G++K   V+ G  + +G  +   E+ +   L    
Sbjct: 71  DATIAANGQLVLRAQNKGDVASLMGGVVKAIYVKEGQNVKRGQVVALVENTDVVSLQREY 130

Query: 100 KVSIKNLRCHI-DTEKSAL 117
             + K     + D E+  L
Sbjct: 131 FSASKECELALTDLERQKL 149



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 74/220 (33%), Gaps = 19/220 (8%)

Query: 210 AVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            V   D+   +R         EL     E++ +L        +   + A        +L 
Sbjct: 117 LVENTDVVSLQREYFSASKECELALTDLERQKLLNKAGAGVKKNAQQAAKEYHVAHANLI 176

Query: 268 QNQRTFADEMSKLTILEKTREQKT--ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
              +  A        + + +      + +PIAGT+    + S  ++A    PLMKI  ++
Sbjct: 177 GIGKQLAQMGISTAAVARGKFTTAFPLRAPIAGTVSQITA-SLGSFADMQTPLMKIQ-NN 234

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           +       +  K +Q VK G    +         +   K ++  +  +    ++N ++  
Sbjct: 235 QAIECDLNIFEKDLQKVKPGDKVYLSLT-----NQPGIK-LVGHVYGLNQYFNDNSKSVA 288

Query: 386 YYEVILKITDLAFSDNNI----ELRNGFPAEVLFTAKNTT 421
              V +KI   +   + +     L +G          + +
Sbjct: 289 ---VHVKIDAQSLKTSGVHGSARLFDGMYVSGKIATGSQS 325


>gi|225574664|ref|ZP_03783274.1| hypothetical protein RUMHYD_02741 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038132|gb|EEG48378.1| hypothetical protein RUMHYD_02741 [Blautia hydrogenotrophica DSM
           10507]
          Length = 1199

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 82/268 (30%), Gaps = 34/268 (12%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENG-SQILQGTPLLTFEDIETTDLIDLKKVSI 103
            + G      +  E++              G  ++         ++      +D K    
Sbjct: 347 VADGWEQVTASRKELQ-------------EGKEELEASQK--KLDEEIKKADLDGKWKEY 391

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY-- 161
           K  +   DT+K   +             +  +EQL     +Y      V    +      
Sbjct: 392 KQQKEAFDTQKKQYERGVQTVQNSLNEVKKAQEQLTVLQAQYDQLKQAVDGGTLEGEELE 451

Query: 162 ------RSLKMKLTRMRSIYLNRLDLENKSSLLRAL---LSSHQKDLTMMKNLFEKNAVS 212
                   LK+ + +++++   +  LE K + L      L + +  L   K   E    +
Sbjct: 452 NAKAQLEQLKVSIDQLQTVVAAKPQLEAKLTELEKQKPALDAAEAQLADGKKQLED---A 508

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q  L+  +  +     EL +   + +  ++ +           +  + +  R LE  QR 
Sbjct: 509 QAQLDAAQEKIDAGKKELEQGEAQIEEAVQKLLSTQQTLKASQSQ-ISDSERQLEDGQRE 567

Query: 273 FADEMSKLTILE---KTREQKTILSPIA 297
             +   KL   +      EQK I +   
Sbjct: 568 IDENEQKLKEAQEEIDENEQKLIEAEQD 595


>gi|168704331|ref|ZP_02736608.1| hypothetical protein GobsU_32644 [Gemmata obscuriglobus UQM 2246]
          Length = 366

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 58/146 (39%), Gaps = 7/146 (4%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+ +G +  E   + + +   G++K   V  G ++L G PL   +D + T  + +++ + 
Sbjct: 47  VAGAGIVEPETENIAVGTHVPGVVKAVHVRPGDRLLAGAPLFDLDDRQMTAELAVRRAAR 106

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            +    +  +  A+        +  K  ES+    LD   K      +  N G+     S
Sbjct: 107 DSAEAQL-AKLEAMPRKEELPPLEAKVVESKAN--LDDKTKLFERARRELNSGVG----S 159

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLR 189
            +   TR  ++ + R  L    + L 
Sbjct: 160 NESYETRQMAVDVARAQLRRTEAELE 185


>gi|170681193|ref|YP_001743609.1| MFP family transporter [Escherichia coli SMS-3-5]
 gi|170518911|gb|ACB17089.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli SMS-3-5]
          Length = 285

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 70/220 (31%), Gaps = 27/220 (12%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S +     +  +   +   +S    +L +     +   V+  DL            EL
Sbjct: 30  MQSPWTRDGKIRAEQVSITPQVSGRIVELNIK----DNQLVNAGDLLLTIDKTPFKIAEL 85

Query: 231 RENIHEQKNMLRHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTI 282
                +       + +  +EAN           A  L   + +++  Q +     + L  
Sbjct: 86  NAQ-AQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQ 144

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQ 338
            +    Q  I +P++G +    +    +YA   +PL  +V       I      K+    
Sbjct: 145 AQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR--- 200

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             H+++G  A +          K  +  +  I   I  Q 
Sbjct: 201 --HIREGAPAQITL----YSDNKTLQGHVSSIGRAIYDQS 234



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFKIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 156


>gi|149063535|gb|EDM13858.1| citron, isoform CRA_b [Rattus norvegicus]
 gi|149063536|gb|EDM13859.1| citron, isoform CRA_b [Rattus norvegicus]
 gi|149063537|gb|EDM13860.1| citron, isoform CRA_b [Rattus norvegicus]
 gi|149063538|gb|EDM13861.1| citron, isoform CRA_b [Rattus norvegicus]
 gi|149063539|gb|EDM13862.1| citron, isoform CRA_b [Rattus norvegicus]
          Length = 959

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 78/210 (37%), Gaps = 16/210 (7%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESREEQLLDFL 142
             +     D +  K+   +  R  +  EKS  +    +   +   EK   +R +Q +   
Sbjct: 24  VMDLEALNDELLEKERQWEAWRSVLGDEKSQFECRVRELQRMLDTEKQSRARADQRITES 83

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            +      K     I ++ ++LK +  +  S+     DLE K ++L     S Q+ L   
Sbjct: 84  RQVVELAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQKLETE 143

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + L       +  L + E +     +++   I +Q  ++  +    D+   +     K++
Sbjct: 144 REL-------KQRLLE-EVLYSHEKVKMEGTISQQTKLIDFLQAKMDQPAKK-----KKV 190

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                + +     E ++   LE+  ++  I
Sbjct: 191 PLQYNELKLALEKEKARCAELEEALQKTRI 220


>gi|156742669|ref|YP_001432798.1| multidrug resistance efflux pump-like protein [Roseiflexus
           castenholzii DSM 13941]
 gi|156233997|gb|ABU58780.1| multidrug resistance efflux pump-like protein [Roseiflexus
           castenholzii DSM 13941]
          Length = 501

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/261 (11%), Positives = 81/261 (31%), Gaps = 12/261 (4%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  V + G ++   +     +  +G++ +  V  G  +     LL  +      L+   +
Sbjct: 39  DERVVAEGRVVPMRSAALAMN-SNGVVAEVLVAEGDIVQSQQALLRLDTRRQEALVAQAE 97

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                    +   K+     +++ +++    + R  +      +   T   +        
Sbjct: 98  ADKARAEAALARLKAG----SSEEELMAAEAQVRRAEAQVQQVRGSVTDRDILAAEARLQ 153

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN---LFEKNAVSQNDLN 217
               ++            +  + +    RA L + +  L+  K    L    AV      
Sbjct: 154 QAHARLAELERADDRPEVIQAKARLDEARATLEAEKARLSAAKTDARLRMDQAVDALTRA 213

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDE----ANLEFANYLKEISRDLEQNQRTF 273
           Q   +V +S  +  ++      +   +NE        A ++    L+     +EQ +  +
Sbjct: 214 QSAWVVARSEWDAVQSDGRHPTLGYGLNEAEKRKFLDAFVQAETALRSAESSVEQARVAY 273

Query: 274 ADEMSKLTILEKTREQKTILS 294
                   +     EQ+ I +
Sbjct: 274 DAARQAEAVGVSAAEQRVIEA 294



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/336 (12%), Positives = 102/336 (30%), Gaps = 18/336 (5%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
              ++   T   +  ++S       +  +++       +   +    E    Q       
Sbjct: 176 ARLDEARATLEAEKARLSAAKTDARLRMDQAVDALTRAQSAWVVARSEWDAVQSDGRHPT 235

Query: 145 YHSTCSKVFNYG-ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                ++      + +  ++     +   S+   R+  +         +S+ ++ +   +
Sbjct: 236 LGYGLNEAEKRKFLDAFVQAETALRSAESSVEQARVAYDAARQAEAVGVSAAEQRVIEAQ 295

Query: 204 NLFEKNAVSQN--DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             +++   S N  +L      V  +   L +   E+++    + E            LK 
Sbjct: 296 AAYDRVLRSTNNDELAAARAEVADAQARLDKLRGEERSGAIAVAEAALAEAQANLARLKA 355

Query: 262 --ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
              +  + + +       + L       ++ T+ +P  G +          Y      L+
Sbjct: 356 GPTTAQIAEAEAEVRRATAALLAARTQLDEMTLRAPFGGLVAAVNI-KPGEYVTPGTALI 414

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I   S        +T   I  V+    AT+ F     +   + +  + +I     +   
Sbjct: 415 TIGDPSAWQIETTDLTELSIVKVQPDALATITFDALPGV---EMQGRVTRI----RELGE 467

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           N Q    Y VI+     A + ++  LR    A V  
Sbjct: 468 NRQGDITYRVII-----APNQHDTRLRWNMTASVAI 498


>gi|120556402|ref|YP_960753.1| RND family efflux transporter MFP subunit [Marinobacter aquaeolei
           VT8]
 gi|120326251|gb|ABM20566.1| efflux transporter, RND family, MFP subunit [Marinobacter aquaeolei
           VT8]
          Length = 365

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 66/216 (30%), Gaps = 24/216 (11%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           +Q  ++ +    + E     +     + +   +   +            ++ +  +    
Sbjct: 93  KQGDVLVRLDAAIDEAALRTRRAEAQLAQQEFKRISDLLPRRAVSQSQYDEAKANYDAAR 152

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +++   E    +K I +P  G  +  +      Y     P+++I       Y+   ++ K
Sbjct: 153 ARVNEAEAQLNKKVIKAPFDGK-LGIRMVDQGQYIGTGTPIVEIN-MLHPIYVDYTLSEK 210

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  V +GY  +V      D     F+  +  I+  ++ +           V ++     
Sbjct: 211 YLPDVDQGYPVSVTVAAVPDRT---FEGDVSAINTSVNPETRT--------VRIR---AI 256

Query: 398 FSDNNIELRNGFPAEV--------LFTAKNTTLAQE 425
            ++ +  LR G  A V                    
Sbjct: 257 LNNEDNLLRPGMFATVQTGQPRDNEVVTLPREAISY 292



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           ++ + G +    N +E+ +   G+I+    E+G  + QG  L+  +       ID   + 
Sbjct: 58  AIKAVGSVEAI-NGIEVANEVPGVIESINFESGDTVKQGDVLVRLD-----AAIDEAALR 111

Query: 103 IKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            +     +   E   +  L  +  V +  ++  +        + +   +++    I +
Sbjct: 112 TRRAEAQLAQQEFKRISDLLPRRAVSQSQYDEAKANYDAARARVNEAEAQLNKKVIKA 169


>gi|304382524|ref|ZP_07365019.1| HlyD family secretion protein [Prevotella marshii DSM 16973]
 gi|304336355|gb|EFM02596.1| HlyD family secretion protein [Prevotella marshii DSM 16973]
          Length = 328

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 80/235 (34%), Gaps = 18/235 (7%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L  +  + ++ I  LI +  L   E ++   G++   +    + S   G I + +V+ G 
Sbjct: 12  LAAIAFVGVVAITALIGYFTLGKTEETI--QGQVEVTEYR--VSSKVPGRILELRVKEGD 67

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFESR 134
            +  G  L   +  E    +   + +        +   +    + +   Y V ++     
Sbjct: 68  YVHVGDTLAILDAPEVKAKMTQAQSAENAAAAMSEMADAGARQEQIRGAYQVWQQTIAG- 126

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
               L+   K +    ++F+ G+ S  +         +++   +   +++  +       
Sbjct: 127 ----LEIAKKSYERVQRLFDEGVMSAQK-RDEAFANYKAMEAQQKAAKSQYDMATNGARK 181

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            ++     +    + AV +       R     T++L +   E   +   + EL  
Sbjct: 182 EERRAAAAQVGRAQGAVEEV------RSYIHETVQLAQMEGEVSEVYPKVGELVG 230


>gi|260576936|ref|ZP_05844918.1| efflux transporter, RND family, MFP subunit [Rhodobacter sp. SW2]
 gi|259020872|gb|EEW24186.1| efflux transporter, RND family, MFP subunit [Rhodobacter sp. SW2]
          Length = 373

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 52/151 (34%), Gaps = 18/151 (11%)

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +L   +   +   + L+      ++  + +P  GT+          + Q   P+  I+  
Sbjct: 152 ELTARRSAKSAAETALSQARAAEDRLQLKAPFGGTVKTVDV-EIGEWVQVGTPVSTILAL 210

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                ++A+V+   + +V  G  A VR      +   + +  I  +    S         
Sbjct: 211 D-PIVVKAEVSELDVGYVAVGTAAKVRL-----VDGTEMQGTIRHVARQASDVTRTF--- 261

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   + ++A  + + ++  G  AEV  
Sbjct: 262 --------LVEVALPNADHKIPAGMTAEVRV 284


>gi|188535129|ref|YP_001908926.1| Macrolide-specific efflux protein [Erwinia tasmaniensis Et1/99]
 gi|188030171|emb|CAO98057.1| Macrolide-specific efflux protein [Erwinia tasmaniensis Et1/99]
          Length = 384

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 81/260 (31%), Gaps = 24/260 (9%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQK-DLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           ++R +Y+ + D   K  LL  +  + Q+ +L   +               Q+     + L
Sbjct: 71  QLRKLYVRQGDRVKKGQLLAEIDPTIQESELNNAQAQLASA-------KAQKLSARTTLL 123

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             R+    Q  M+R  + +  +     A Y  +I + +E +Q         +        
Sbjct: 124 RYRQEYQRQSMMMRDGSGVRSDFEQAKAQYDAQI-QQIEVSQAQIVQAEMAVKTANANLG 182

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
              I++PI G ++             SQ  P + ++       ++ +++   IQ +  G 
Sbjct: 183 YTRIVAPIDGEVLGI-VTREGQTIVSSQTAPTILVLADLDNMLVQTRISEADIQKIHPGQ 241

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-------YYEVILKITDLAFS 399
                     D         ++       ++ +             YY     + + +  
Sbjct: 242 PLHFYVIANPDKGYNSHMGFVQTAPQEALEERDGRANGANQQASAVYYSGTFSVPNASR- 300

Query: 400 DNNIELRNGFPAEVLFTAKN 419
               EL+    A+V      
Sbjct: 301 ----ELKTSMTAQVFIRIAE 316



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 41/125 (32%), Gaps = 1/125 (0%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
              IE  V  +G +     V  + +  +G ++K  V  G ++ +G  L   +       +
Sbjct: 43  TGNIEKEVLVTGMLKPAMQV-NVGAQVNGQLRKLYVRQGDRVKKGQLLAEIDPTIQESEL 101

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  +  + + +    + ++ L     +Y               DF        +++    
Sbjct: 102 NNAQAQLASAKAQKLSARTTLLRYRQEYQRQSMMMRDGSGVRSDFEQAKAQYDAQIQQIE 161

Query: 157 ISSVY 161
           +S   
Sbjct: 162 VSQAQ 166


>gi|26990296|ref|NP_745721.1| efflux transporter, RND family, MFP subunit [Pseudomonas putida
           KT2440]
 gi|24985248|gb|AAN69185.1|AE016552_7 RND transporter, membrane fusion protein [Pseudomonas putida
           KT2440]
          Length = 435

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 60/156 (38%), Gaps = 4/156 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +    N V ++S  +G + K   + G ++  G  L   +       +   + ++  
Sbjct: 83  ALGTVTA-TNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYRIALQQAEGTLAQ 141

Query: 106 LRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            +  +   +  L     L  +  + ++  ++ E Q+  F G   +  ++V +  ++  + 
Sbjct: 142 NQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVNDARLNLDFT 201

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            ++  ++    +    L     ++   AL+   Q +
Sbjct: 202 QIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTE 237


>gi|332865692|ref|XP_003318566.1| PREDICTED: huntingtin-interacting protein 1-like [Pan troglodytes]
          Length = 1037

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 5/192 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           LI+     I  L+  ++  K+    +  +        E+   +      +    C +   
Sbjct: 376 LIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEAELAEQQHLRQQAADDC-EFLR 434

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +  + R  +      RS+       +        L   + + +    +L  KNA    
Sbjct: 435 AELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNA---- 490

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ +Q  +  ++ ++L     E ++ L  I++       E    L+ + ++L  +QR   
Sbjct: 491 EVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQ 550

Query: 275 DEMSKLTILEKT 286
                L    ++
Sbjct: 551 VLQGSLETSAQS 562


>gi|327192526|gb|EGE59480.1| putative exopolysaccharide biosynthesis/export protein [Rhizobium
           etli CNPAF512]
          Length = 444

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 70/247 (28%), Gaps = 22/247 (8%)

Query: 44  VSSSGEILNEDNVVEIKSP--FSGIIKKFQVENGSQIL-QGTPLLTFEDIETTDLIDLKK 100
           V + GE      +  ++S     G ++    +    I   G              ID   
Sbjct: 138 VMAPGEYKFRSGLRVLQSLAMSGGPLRAAAQQQSETIKLAGEL----------REIDHAL 187

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +        + TE +    +          F+        +     +    +F    S++
Sbjct: 188 LRSAAKLARLQTEMTGAKEI---------VFDQPPAADRQYAESIFAEERVIFQARASAL 238

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            +     +     +      LE K       + S ++ LT ++ L +K     +     E
Sbjct: 239 DKQSVALVELRNLLTAEIETLEEKLKGSDDNIQSVEEQLTSVRTLVQKGLTITSRQMDLE 298

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R++     +  + +       + INE          N   E + +++  +        K 
Sbjct: 299 RLLTTYRSDRLDLVTAIMRGRQAINETKRNLEGLSDNRRSENASEVQAEKANLDQLKLKR 358

Query: 281 TILEKTR 287
              ++  
Sbjct: 359 DTTQQLL 365


>gi|292493339|ref|YP_003528778.1| efflux transporter RND family, MFP subunit [Nitrosococcus
           halophilus Nc4]
 gi|291581934|gb|ADE16391.1| efflux transporter, RND family, MFP subunit [Nitrosococcus
           halophilus Nc4]
          Length = 383

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/242 (11%), Positives = 72/242 (29%), Gaps = 19/242 (7%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           ++    + LL     DL     L EK A +       +         + E   ++   L+
Sbjct: 77  DQVKAGQLLLELWNNDLEAEVQLAEKQAKAST----AQAEEACVRARVAEKEAQRLLQLQ 132

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
             + + +E         +         Q       +++ +      +  + +P  G +  
Sbjct: 133 KRSLISEELVDRAVGDAQARRAACHAAQARAEVSEAQMAVNRAVLARTLLYAPFDGIVAE 192

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKL-----TYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
             +     +   S   +  +P   L      Y+ A +       ++ G    +    + D
Sbjct: 193 VNA-ELGAFVTPSPTGVPTLPAIDLIDRSCLYVSAPIDEVDAPTIRPGMPTRITLDAFRD 251

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                   ++ ++ P +   +   +T +         + +   +   L  G+ A+V    
Sbjct: 252 RVFP---GVVRRVAPYVLDIEKQARTVD------VEAEFSRPQDTERLLPGYSADVEVIL 302

Query: 418 KN 419
           + 
Sbjct: 303 ER 304



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 51/143 (35%), Gaps = 17/143 (11%)

Query: 16  SLKRMTLLSIIGIIGLITWSIL----LPIEISVSSSGEI---LNEDNVVEIK-------- 60
           S + + LL ++  I  + W +     +P+ +S    G +   +       IK        
Sbjct: 2   SRRLIGLLLVLTGISFLVWYLNRPEPIPVALSTVERGLVEATVVNTRAGTIKACRRAGLS 61

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE--KSALD 118
            P  G + +  V+ G Q+  G  LL   + +    + L +   K      +    ++ + 
Sbjct: 62  PPAGGQVDQLTVKEGDQVKAGQLLLELWNNDLEAEVQLAEKQAKASTAQAEEACVRARVA 121

Query: 119 FLNNKYDVLEKAFESREEQLLDF 141
               +  +  +      E+L+D 
Sbjct: 122 EKEAQRLLQLQKRSLISEELVDR 144


>gi|260429614|ref|ZP_05783591.1| secretion protein HlyD family protein [Citreicella sp. SE45]
 gi|260420237|gb|EEX13490.1| secretion protein HlyD family protein [Citreicella sp. SE45]
          Length = 411

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 64/209 (30%), Gaps = 2/209 (0%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V I    SG + +  V N   +  G PL+  + +     +D  +  +          +
Sbjct: 73  RTVTILPQVSGRVSEIHVSNNQIVAAGDPLIELDGLSQRASLDAARAQLVETEVSATIAE 132

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           + L            A    +E+L           S V    I  +   +  +  ++++ 
Sbjct: 133 TDLALAEAGVAQARAALTQSQEELERNETLRDQGSSAVRLTEIERLENLVDQRQAQLQAA 192

Query: 175 YLNRLDLENKSSL-LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
            L +   + +    + A L S +  + + +   +K  +    ++ Q         +    
Sbjct: 193 ELQQQSAQQQIDQVIPARLESAKAQVALSQAELDKTVIVAG-IDGQIEQFGLQVGDFISP 251

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEI 262
           +     +L       +     F+    ++
Sbjct: 252 LARPAGILVPTESGRNRFQAAFSQIAAQV 280


>gi|126641715|ref|YP_001084699.1| secretion protein HlyD [Acinetobacter baumannii ATCC 17978]
          Length = 299

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/351 (13%), Positives = 107/351 (30%), Gaps = 75/351 (21%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I+K  V+ G ++  G  L T                                    
Sbjct: 12  QSGRIQKLLVQEGDKVQAGQVLATLNT--------------------------------- 38

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                     + + Q      +  +    +    + +    +     ++ S         
Sbjct: 39  ---------NALQIQAKQAQAQLKAQQEAIIKQEVGARPEEITQAKAQLASAQAELDKTN 89

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                L+ L+SS            +  A+SQ +L+  +   + +   +RE     + +++
Sbjct: 90  KNLQRLQILVSST-----------DGRAISQQELDYAKSNQHSAEAAVRERQANLELLIK 138

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              +   EA                  +  +    + L +++    Q  + SP+   +V 
Sbjct: 139 GARKEDREA-----------------TRAQYEVTKANLDLIKYNLTQAELRSPVNA-VVR 180

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +     +    +Q  +  +  +   +IR  V  + +  +K G TA V    Y +     
Sbjct: 181 ARLQEVGD-MTTAQKAVYTLALTNPKWIRVYVNEQDLSSIKMGGTAQVIRDAYPNQ---P 236

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
               I  I  +       +QT+E    ++    +  +D N +L+ G P  V
Sbjct: 237 INGKIGYISSVAEFTPKTVQTEEIRTTLVYEVRVYVNDPNDQLKMGQPVTV 287


>gi|110805619|ref|YP_689139.1| hypothetical protein SFV_1663 [Shigella flexneri 5 str. 8401]
 gi|110615167|gb|ABF03834.1| putative membrane protein [Shigella flexneri 5 str. 8401]
          Length = 288

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 61/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE--------F 255
           N+ +   V+  +L            EL     +       + +  +EAN          F
Sbjct: 62  NIKDNQLVNAGELLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIF 120

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 121 AEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 179

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 180 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 230

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 231 RAIYDQS 237



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 4   MSIKTIKYFSTIIVAIVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 59

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 60  ELNIKDNQLVNAGELLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 119

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 120 FAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 159


>gi|17549333|ref|NP_522673.1| transmembrane multidrug efflux system transmembrane protein
           [Ralstonia solanacearum GMI1000]
 gi|17431585|emb|CAD18263.1| probable transmembrane multidrug efflux system transmembrane
           protein [Ralstonia solanacearum GMI1000]
          Length = 438

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 41/119 (34%), Gaps = 3/119 (2%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            VE++    G I     ++GS + +G PL T +       +   + ++   +  +    S
Sbjct: 69  RVEVRPLVGGTITAVHFKDGSIVRKGDPLFTIDPRPYAAEVARTQAALTAAKSRVAYTAS 128

Query: 116 ALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            L+    L     +  + FE +E    +         + +    ++  Y  +   +   
Sbjct: 129 ELERAQKLVADNAIARREFEEKENAAREAQANLQGAAAALDAAKLNLEYTRIVAPVAGR 187



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 40/137 (29%), Gaps = 13/137 (9%)

Query: 221 RIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             V ++   L   +  +    + L    +L  +  +    + +E      + Q       
Sbjct: 107 AEVARTQAALTAAKSRVAYTASELERAQKLVADNAIARREF-EEKENAAREAQANLQGAA 165

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + L   +   E   I++P+AG +   +  +  N            P          V+P 
Sbjct: 166 AALDAAKLNLEYTRIVAPVAGRVSRAEI-TVGNVVATGGAA----PVLTTLV---SVSPM 217

Query: 338 QIQHVKKGYTATVRFPH 354
            +          +RF  
Sbjct: 218 YVAF-DADEQTYLRFSA 233


>gi|326424407|ref|NP_763409.2| multidrug resistance efflux pump [Vibrio vulnificus CMCP6]
 gi|319999797|gb|AAO08399.2| Multidrug resistance efflux pump [Vibrio vulnificus CMCP6]
          Length = 376

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 71/232 (30%), Gaps = 23/232 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   ++ +   +K        +     + E       A     +++    K  +EK A +
Sbjct: 99  FEAEVAKLEAKVKEASQGALGLESTLKEAEAAVIKAIAERDKAKREYERYKRGYEKGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  ++   +    +   L   + + K     I                 +  ++      
Sbjct: 159 EQQMDTTRQAFKAAQAALE--VAQSKQEQAQIA----------------LDSEVGGENTQ 200

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
            A  +++L   +   EQ  + +P  G +          +      P+M  V   +  Y  
Sbjct: 201 VAQLLAELRKAQFDLEQTVVRAPTDGYVTQLALRPGVMSVPLPLAPVMTFVHSEEKIYTA 260

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           A      +Q ++ G+ A   F        K FK  + ++ P I +     + 
Sbjct: 261 A-FRQNSLQRLQPGFEAEFMFRALP---GKVFKGEVIEVLPAIGESQFQARG 308



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 49/147 (33%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G + +  V+    + QG  L   + I     +   +  +K        L   +   ++A+
Sbjct: 72  GRVIEVPVQANQPLKQGDVLFRIDPIPFEAEVAKLEAKVKEASQGALGLESTLKEAEAAV 131

Query: 118 DFLNNKYDVLEKAFE--SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                + D  ++ +E   R  +   F  +   T  + F    +++  +   +     ++ 
Sbjct: 132 IKAIAERDKAKREYERYKRGYEKGAFTEQQMDTTRQAFKAAQAALEVAQSKQEQAQIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                   + + L A L   Q DL   
Sbjct: 192 SEVGGENTQVAQLLAELRKAQFDLEQT 218


>gi|258515256|ref|YP_003191478.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257778961|gb|ACV62855.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 414

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 80/234 (34%), Gaps = 25/234 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +V N   +S      ++     +    ++  +      R      + D     +L + +A
Sbjct: 106 QVENAKAASSQARAGLEQVENGATEHEKIQAQAMLDKARTSYDKAKADYDRANSLHQASA 165

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +SQ+D  + + ++  +  +L    + ++     I     E   +     +         Q
Sbjct: 166 ISQSDYEKAQTVMIAAQKDLE---NAEQAHATVIEGPRSEIKAQTRAAYQ---------Q 213

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                E + L       E+  + +PI+GTI+  +  +         P+ KI        +
Sbjct: 214 SVVGQEKASL-----LLEKTRLKAPISGTIIS-KLSTLGQLISAGTPVYKIGAID-KLKV 266

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
              V+ ++I   + G   T+    Y   R    +  ++ I P   Q    + T+
Sbjct: 267 VLPVSDREISQWQVGKLVTLNL--YGQKR----EGTVKYIYPATEQNTGTIGTE 314



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/184 (10%), Positives = 60/184 (32%), Gaps = 11/184 (5%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G I    ++ G  +  G+ +   +D +    ++  K +    R  ++  ++       
Sbjct: 74  TGGRITSLPLKEGEYVQAGSVIAQIDDEDYMLQVENAKAASSQARAGLEQVENGATE--- 130

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +  +A   +     D     +   + +      S     K +      +   + DLE
Sbjct: 131 HEKIQAQAMLDKARTSYDKAKADYDRANSLHQASAISQSDYEKAQTV----MIAAQKDLE 186

Query: 183 NKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQK 238
           N       ++   + ++    +  ++++ V Q     L ++ R+    +  +   +    
Sbjct: 187 NAEQAHATVIEGPRSEIKAQTRAAYQQSVVGQEKASLLLEKTRLKAPISGTIISKLSTLG 246

Query: 239 NMLR 242
            ++ 
Sbjct: 247 QLIS 250


>gi|145300464|ref|YP_001143305.1| ABC-type macrolide transporter, membrane fusion protein [Aeromonas
           salmonicida subsp. salmonicida A449]
 gi|142853236|gb|ABO91557.1| ABC-type macrolide transporter, membrane fusion protein [Aeromonas
           salmonicida subsp. salmonicida A449]
          Length = 384

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 94/321 (29%), Gaps = 51/321 (15%)

Query: 110 IDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
              E+  L+  +     +  +   S   Q+   +   H         G   V      + 
Sbjct: 39  ATAERRDLEQSVLADGTLQAQKLVSVGAQVSGQIKVLHVALGDQVKQGDLLVEIDDLTQQ 98

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             ++       +++ + +  RA L ++       + +  +   SQ D +  E  +  +  
Sbjct: 99  NALKDAEAALDNVQAQLASRRATLRNNGLVFDRQRKVLARGLGSQADYDSAEATLIATRA 158

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           ++R  I +       ++                                           
Sbjct: 159 DIRALIAQAVQARIAVD------------------------------------TARVNLG 182

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGY 346
              I++P+AGTIV              Q    IV  +      + A+++   +  V  G 
Sbjct: 183 YTRIVAPMAGTIVAIPV-EQGQTVNAVQSTPTIVKVARLDTMTVEAQISEADVIRVSTGL 241

Query: 347 TATVRFP---HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
              + F          E + +AI    D I     ++  T  YY  + ++++   +    
Sbjct: 242 P--IYFTILGAPEHRYEARLRAIEPAPDSINDDTSSSTTTAVYYNGLFEVSNPEGA---- 295

Query: 404 ELRNGFPAEV-LFTAKNTTLA 423
            LR G  A+V L  A      
Sbjct: 296 -LRIGMTAQVHLVLATERNAL 315



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 55/142 (38%), Gaps = 6/142 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E SV + G +     +V + +  SG IK   V  G Q+ QG  L+  +D+   + +   
Sbjct: 46  LEQSVLADGTLQA-QKLVSVGAQVSGQIKVLHVALGDQVKQGDLLVEIDDLTQQNALKDA 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++ N++  + + ++ L      +D   K          D+      +         + 
Sbjct: 105 EAALDNVQAQLASRRATLRNNGLVFDRQRKVLARGLGSQADY-----DSAEATLIATRAD 159

Query: 160 VYRSLKMKLTRMRSIYLNRLDL 181
           +   +   +    ++   R++L
Sbjct: 160 IRALIAQAVQARIAVDTARVNL 181


>gi|117920105|ref|YP_869297.1| RND family efflux transporter MFP subunit [Shewanella sp. ANA-3]
 gi|117612437|gb|ABK47891.1| efflux transporter, RND family, MFP subunit [Shewanella sp. ANA-3]
          Length = 360

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 59/187 (31%), Gaps = 22/187 (11%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT--FADEMSKLTILE 284
            L+  E I + K     +++   E     +        +LE+++         ++L   +
Sbjct: 92  QLQNAEQIAKVKVAQVKVSDNQRELARISSLVTSRTVAELERDRLQTLIDTTRAELEQAQ 151

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHV 342
            +   ++I++P  G  +  +  S  +         +I          +   V  + IQ +
Sbjct: 152 SSLNDRSIVAPFNGR-LGLRQVSVGSLVTPGT---EITTLDDISKIKLDFSVPERFIQDL 207

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           + G     +   + D     FK  +  ID  ++                 I      + +
Sbjct: 208 QPGKQVEAKAVAFPDEI---FKGKVISIDSRVNPTT-----------RAVIVRAEIPNPD 253

Query: 403 IELRNGF 409
           + L  G 
Sbjct: 254 LRLLPGM 260



 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 47/121 (38%), Gaps = 4/121 (3%)

Query: 31  LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +I  + + P+   V + G     ++V  I    + ++   + ++G  + +G  L+  ++ 
Sbjct: 38  VIAMAAMAPVRDEVEAIGTNKAFESV-TITPKVTDVVTSLKFDDGDIVKKGDLLVQLQNA 96

Query: 91  ETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E    + + +V +   +     I +  ++      + D L+   ++   +L       + 
Sbjct: 97  EQIAKVKVAQVKVSDNQRELARISSLVTSRTVAELERDRLQTLIDTTRAELEQAQSSLND 156

Query: 148 T 148
            
Sbjct: 157 R 157


>gi|37676009|ref|NP_936405.1| multidrug resistance efflux pump [Vibrio vulnificus YJ016]
 gi|37200549|dbj|BAC96375.1| multidrug resistance efflux pump [Vibrio vulnificus YJ016]
          Length = 376

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 71/232 (30%), Gaps = 23/232 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   ++ +   +K        +     + E       A     +++    K  +EK A +
Sbjct: 99  FEAEVAKLEAKVKEASQGALGLESTLKEAEAAVIKAIAERDKAKREYERYKRGYEKGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  ++   +    +   L   + + K     I                 +  ++      
Sbjct: 159 EQQMDTTRQAFKAAQAALE--VAQSKQEQAQIA----------------LDSEVGGENTQ 200

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
            A  +++L   +   EQ  + +P  G +          +      P+M  V   +  Y  
Sbjct: 201 VAQLLAELRKAQFDLEQTVVRAPTDGYVTQLALRPGVMSVPLPLAPVMTFVHSEEKIYTA 260

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           A      +Q ++ G+ A   F        K FK  + ++ P I +     + 
Sbjct: 261 A-FRQNSLQRLQPGFEAEFMFRALP---GKVFKGEVIEVLPAIGESQFQARG 308



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 49/147 (33%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G + +  V+    + QG  L   + I     +   +  +K        L   +   ++A+
Sbjct: 72  GRVIEVPVQANQPLKQGDVLFRIDPIPFEAEVAKLEAKVKEASQGALGLESTLKEAEAAV 131

Query: 118 DFLNNKYDVLEKAFE--SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                + D  ++ +E   R  +   F  +   T  + F    +++  +   +     ++ 
Sbjct: 132 IKAIAERDKAKREYERYKRGYEKGAFTEQQMDTTRQAFKAAQAALEVAQSKQEQAQIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                   + + L A L   Q DL   
Sbjct: 192 SEVGGENTQVAQLLAELRKAQFDLEQT 218


>gi|332532501|ref|ZP_08408379.1| secretion protein HlyD family protein [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332038144|gb|EGI74591.1| secretion protein HlyD family protein [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 286

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 58/190 (30%), Gaps = 20/190 (10%)

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            R +     +A  E       I+  + +     A      TI +   ++  I++P +G I
Sbjct: 105 ERRVELNTQQAISEETLESTRINTKIAEANYNLAKTEQ--TIAQLNVDRTKIVAPASGQI 162

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           +        NY  Q  P+  IV  S   Y+       +I  +     A +          
Sbjct: 163 INLNLR-QGNYVAQGTPVFAIV-QSDSFYVTGYFEESKIPLIYPDQKAKIAL----LSGG 216

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEV-----------ILKIT-DLAFSDNNIELRNG 408
           K+    +  +   I+  +     Q   +V            + +   L     N +L  G
Sbjct: 217 KQLTGHVVSVGKAIANTNTQSNGQLLPQVQQTFNWVRLSQRIPVDIKLDSLPENTQLSAG 276

Query: 409 FPAEVLFTAK 418
             A +    +
Sbjct: 277 MTATIHLATR 286



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 50/141 (35%), Gaps = 5/141 (3%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
           T+L +I  +    W     +    +  G I  +  ++ +    SG +    +++G  + +
Sbjct: 10  TILVVIAAVFAGRWVWTDYMHTPWTRDGRIRAD--IITVAPDVSGWVTALNIKDGQNVQK 67

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD---FLNNKYDVLEKAFESREEQ 137
           G  L   +       +D  K + +N     +  K   +    LN +  + E+  ES    
Sbjct: 68  GEVLFNVDKKRYQAALDKSKANTENALYTWELAKHKYERRVELNTQQAISEETLESTRIN 127

Query: 138 LLDFLGKYHSTCSKVFNYGIS 158
                  Y+   ++     ++
Sbjct: 128 TKIAEANYNLAKTEQTIAQLN 148


>gi|300694135|ref|YP_003750108.1| transmembrane multidrug efflux system, component of acridine efflux
           pump [Ralstonia solanacearum PSI07]
 gi|299076172|emb|CBJ35485.1| transmembrane multidrug efflux system, putative component of
           acridine efflux pump [Ralstonia solanacearum PSI07]
          Length = 441

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 41/119 (34%), Gaps = 3/119 (2%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---T 112
            VE++    G I     ++GS + +G PL T +       +   + ++   +  +    +
Sbjct: 70  RVEVRPLVGGTIMAVHFKDGSIVKKGDPLFTIDPRPYAAEVARTQAALTAAKSRVAYTTS 129

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           E      L     +  + FE +E    +         + +    ++  Y  +   +T  
Sbjct: 130 ELERAQKLVADNAIARREFEEKENAAREAQANLQGAAAALDAARLNLEYTRIVAPVTGR 188


>gi|260549058|ref|ZP_05823279.1| membrane-fusion protein [Acinetobacter sp. RUH2624]
 gi|260407786|gb|EEX01258.1| membrane-fusion protein [Acinetobacter sp. RUH2624]
          Length = 446

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 80/233 (34%), Gaps = 28/233 (12%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDL 266
             ++Q D   QE  +  S   ++    ++   +  +NE   E   +   Y ++     DL
Sbjct: 87  QLIAQIDSTTQENSLKTSDANIKNLEAQRLQQVASLNEKQLEYRRQQQMYAQDATPRADL 146

Query: 267 EQNQRTFADEMSKLTILEKTRE--------------QKTILSPIAGTIVYNQSFSSSNYA 312
           E  +  +    +++  L+   E                 I++P  GT+V           
Sbjct: 147 ESAEAAYKTAQAQVKALDAQIESAKVTRSTAQTNIGYTRIVAPTDGTVVAI-VTEEGQTV 205

Query: 313 QQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +Q    IV  +  +   I+A+V+   I  V+KG             R    + I    
Sbjct: 206 NANQSAPTIVKIAKLQNMTIKAQVSEADIMRVEKGQKVYFTTLGDDSKRYATLRQIEPAP 265

Query: 371 DPIISQQDNNLQTQE----YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           D I S+ ++   +      YY  +  +      + + +LR    A+V     +
Sbjct: 266 DSISSESNSTTSSTSSSAVYYNALFDVP-----NTDGKLRIDMTAQVYIVLDS 313



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 56/150 (37%), Gaps = 10/150 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     ++ + +  SG +KK  V+ G Q+ QG  +   +     + +   
Sbjct: 46  IENNVLATGTLDA-TKLISVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSTTQENSLKTS 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +IKNL      + ++L+         EK  E R +Q +           +       +
Sbjct: 105 DANIKNLEAQRLQQVASLN---------EKQLEYRRQQQMYAQDATPRADLESAEAAYKT 155

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               +K    ++ S  + R   +      R
Sbjct: 156 AQAQVKALDAQIESAKVTRSTAQTNIGYTR 185


>gi|302346395|ref|YP_003814693.1| hypothetical protein HMPREF0659_A6649 [Prevotella melaninogenica
           ATCC 25845]
 gi|302150427|gb|ADK96688.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
           25845]
          Length = 1215

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 78/236 (33%), Gaps = 23/236 (9%)

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++            +  DL + +       +  I +E+       N   +   A + R+ 
Sbjct: 655 RVEADQI-----PTKRQDLQNQRHKLEMEEQEIISSEQELRMRAFNDATLKVDAEKERQA 709

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR-SIYLNRLDLENKSSLLRAL---- 191
           +      K        FN  + ++   L     + +  + L+  + EN+ + L       
Sbjct: 710 KNDAKNEKDLKELDAAFNRSVKALNNELNAFQEQQKTEVELHNQEFENQKTQLDKQQKAE 769

Query: 192 ----------LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY---KSTLELRENIHEQK 238
                     L+ ++K L  +  L ++    +ND+ + E  V        ++R NI E  
Sbjct: 770 LEGKGVDIRLLNEYRKALDELNKLLQQIETDRNDVIKYEDAVATLFSKEADIRNNIKEIG 829

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             L  + + Y++  +      +         Q+  A     L    +  E + ++S
Sbjct: 830 QRLIMLQQRYEDKRIRIEKKRQGFEDQQRAIQKDLAHRRDGLNQYHQVIENEHLVS 885


>gi|115525983|ref|YP_782894.1| RND family efflux transporter MFP subunit [Rhodopseudomonas
           palustris BisA53]
 gi|115519930|gb|ABJ07914.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
           palustris BisA53]
          Length = 363

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 60/168 (35%), Gaps = 19/168 (11%)

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  +++    ++  +       ++L   E  + Q  I++P AGTI   +S +     Q  
Sbjct: 136 AQVIEQRETLVKTTEAKLQAAQAQLEDAEARQRQTVIVAPAAGTIAS-RSVAIGQVVQVG 194

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             + +++       + A+V  + +        ATV  P       K  + ++  + PI+ 
Sbjct: 195 VEMFRLI-QDSRIEVDARVLEQDLIAAAARQPATVIGPS-----GKSEQGVVRAVSPIVD 248

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            +           V + +        +  L+ G  A V    ++  + 
Sbjct: 249 PKTRLGT------VRIAL------PGDTPLKPGMFARVAIAVESKLVL 284



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 63/192 (32%), Gaps = 12/192 (6%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDIETTDLI 96
             I  S++++G ++    +  I S   G+ + +  V+ G  + +G  L       TT  +
Sbjct: 44  SEITGSIAATGNVVAWREI-PISSEAGGLAVTELAVDEGDVVKKGQALARLNQELTTAAL 102

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++  +  L+  +   +S           +          +   + +   T  K     
Sbjct: 103 TKQRAVVDELQASLAIARSDAARARAVSSGV----------ISAQVIEQRETLVKTTEAK 152

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + +    L+    R R   +        +S   A+    Q  + M + + +        +
Sbjct: 153 LQAAQAQLEDAEARQRQTVIVAPAAGTIASRSVAIGQVVQVGVEMFRLIQDSRIEVDARV 212

Query: 217 NQQERIVYKSTL 228
            +Q+ I   +  
Sbjct: 213 LEQDLIAAAARQ 224


>gi|71407775|ref|XP_806333.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70870049|gb|EAN84482.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 522

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 70/195 (35%), Gaps = 6/195 (3%)

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SS 159
           ++  LR  ++        L ++      A  + E QL +      +   ++  YG   S+
Sbjct: 1   ALAALRDRLEEYGREKSALESRSSESVDALAAMERQLQERDDALAALRDRLEEYGREKSA 60

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +       +  + ++     + ++  + LR  L  + ++ + +++   ++  +   + +Q
Sbjct: 61  LESRSSESVDALAAMERQLQERDDALAALRDRLEEYGREKSALESRSSESVDALAAMERQ 120

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            +    +   LR+ + E       +     E+     + L  + R L++     A    +
Sbjct: 121 LQERDDALAALRDRLEEYGREKSALESRSSES----VDALAAMERQLQERDDALAALRDR 176

Query: 280 LTILEKTREQKTILS 294
           L    + +      S
Sbjct: 177 LEEYGREKSALESRS 191



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/174 (10%), Positives = 63/174 (36%), Gaps = 2/174 (1%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +  +  ++  LR  ++        L ++      A  + E QL +      +   ++
Sbjct: 34  ERQLQERDDALAALRDRLEEYGREKSALESRSSESVDALAAMERQLQERDDALAALRDRL 93

Query: 153 FNYGI--SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             YG   S++       +  + ++     + ++  + LR  L  + ++ + +++   ++ 
Sbjct: 94  EEYGREKSALESRSSESVDALAAMERQLQERDDALAALRDRLEEYGREKSALESRSSESV 153

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            +   + +Q +    +   LR+ + E       +     E+    A   +++  
Sbjct: 154 DALAAMERQLQERDDALAALRDRLEEYGREKSALESRSSESVDALAAMERQLQE 207


>gi|300937200|ref|ZP_07152051.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 21-1]
 gi|300457732|gb|EFK21225.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 21-1]
          Length = 378

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 72/226 (31%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++    EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSAAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSAAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|262196704|ref|YP_003267913.1| efflux transporter RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
 gi|262080051|gb|ACY16020.1| efflux transporter, RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
          Length = 379

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 92/288 (31%), Gaps = 20/288 (6%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
           FL +       VF      V   +K  +     +    + ++ + S + A L      + 
Sbjct: 23  FLYQKSQRKPVVFATETPVVADIVKKTVATGSLVPRQEIAIKPRVSGVIAKLHVEPGQII 82

Query: 201 MMKNLFEKNAVSQN--DLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLEFAN 257
               L     +  N  DLN+ E  V  + +EL     E          ++   A L+   
Sbjct: 83  ERDALLADIRIIPNVLDLNRAESAVQSARIELDNAQRELDRSRSLSQRQVLSSAELDRVQ 142

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--- 314
           Y  ++ +   Q  ++    +    + +  +    + S +AGT++        +  +    
Sbjct: 143 YQHQLKKQALQAAQSNLALIKNGALRKSDKVSNQVRSTVAGTVLDVPVEEGESVIESNTF 202

Query: 315 --SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                +   V          +V   ++  +++G    ++      I        +E I P
Sbjct: 203 NEGTTVAT-VADMSDMIFEGRVDESEVGKLREGMELAIKVGA---IEGALLSGTLEYIAP 258

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              + +  ++    +E+   I        ++ +R G+ A      +  
Sbjct: 259 KGVETEGVIE----FEIRAAIEP----REDLVVRAGYSANADIVLERR 298



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 46/127 (36%), Gaps = 3/127 (2%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           ++  I     ++G ++    +  IK   SG+I K  VE G  I +   L   +     ++
Sbjct: 41  VVADIVKKTVATGSLVPRQEI-AIKPRVSGVIAKLHVEPGQIIERDALLA--DIRIIPNV 97

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +DL +         I+ + +  +   ++     +   S E   + +  +      +    
Sbjct: 98  LDLNRAESAVQSARIELDNAQRELDRSRSLSQRQVLSSAELDRVQYQHQLKKQALQAAQS 157

Query: 156 GISSVYR 162
            ++ +  
Sbjct: 158 NLALIKN 164


>gi|224588159|gb|ACN58783.1| ABC transporter permease [uncultured bacterium BLR8]
          Length = 433

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 64/202 (31%), Gaps = 4/202 (1%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +   G ++K   + G  + QG PL+   +      +  ++  +      +   ++ L+  
Sbjct: 94  ALEGGRVEKILAQAGDTVAQGQPLVELSNTALELDVLDREGRLVESITQLQAYETQLEQN 153

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                      E    +L   L +  +   +      +    +++ +L R   +   + +
Sbjct: 154 RVANQKALADIEYDITRLTSALARRQALIERQLIS--TEARDTVRDELDRAHKLKPMQEE 211

Query: 181 LENKSSLLR-ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
              +   LR   L   +  L  ++   +    S+ D              +   I E +N
Sbjct: 212 SNRRQETLRLKQLPQIEAQLVKLQQDLKITH-SKLDNLVVRAPAAGVLTAMDLKIGENRN 270

Query: 240 MLRHINELYDEANLEFANYLKE 261
                 E+  +   + A  + E
Sbjct: 271 RGERFAEITPDTGYKLAASVDE 292


>gi|220917876|ref|YP_002493180.1| secretion protein HlyD family protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219955730|gb|ACL66114.1| secretion protein HlyD family protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 323

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 56/163 (34%), Gaps = 6/163 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V  G  + +G  L+T E  E    ID  K ++   R  +   +        + 
Sbjct: 44  GRVKALAVREGDPVKEGQELVTIESQEVAAKIDQVKAAVDAARARLQIAERGA--RAEER 101

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               +A ++   QL      +    + +    I+    +      + ++        + +
Sbjct: 102 QQARRALDTARSQLEVATKAHERATALLATGTITQ--AAFDEADFKFKAARDQLAVAQAR 159

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           + L+     +  +++  ++ L  +   S  ++    R   ++ 
Sbjct: 160 NDLVIKG--ARAEEVEALRALVRQGQGSLAEVESYGRETVQTA 200



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 84/298 (28%), Gaps = 29/298 (9%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR-----SI 174
           + +K     KA   RE   +    +  +  S+     I  V  ++     R++     + 
Sbjct: 38  VASKIPGRVKALAVREGDPVKEGQELVTIESQEVAAKIDQVKAAVDAARARLQIAERGAR 97

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              R          R+ L    K       L     ++Q   ++ +     +  +L    
Sbjct: 98  AEERQQARRALDTARSQLEVATKAHERATALLATGTITQAAFDEADFKFKAARDQLAVAQ 157

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                +++       EA          +   + Q Q + A+        E    +    +
Sbjct: 158 ARNDLVIKGARAEEVEA----------LRALVRQGQGSLAEV-------ESYGRETVQTA 200

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           PI G +           A    P++ +V  +    +   V    +  VK G    V  P 
Sbjct: 201 PIGGEVAKILVH-RGELAATGYPILTLVDRTDAWAVFP-VREDLLGAVKVGTELDVEVPA 258

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQE-YYEVILKITDLAFSDNNIELRNGFPA 411
                       +  + P+          ++  +++            + ELR G  A
Sbjct: 259 LRRR----LPMTVFSVAPLGDFATWRATGEKGSFDLRTFEVKARPRQPDPELRPGMTA 312


>gi|220925452|ref|YP_002500754.1| polysaccharide export protein [Methylobacterium nodulans ORS 2060]
 gi|219950059|gb|ACL60451.1| polysaccharide export protein [Methylobacterium nodulans ORS 2060]
          Length = 419

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/237 (7%), Positives = 73/237 (30%), Gaps = 15/237 (6%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            Q+            E   +++  +   +  R  ++ ++   +      D+      +  
Sbjct: 146 EQVQVAQQTEFLLADERVRVLEANRRLYRIRRARLEAQRRNEEGFRPPPDLERDPAAAP- 204

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                      +   ++      ++ +SL+M   +   I    + ++ + +     L   
Sbjct: 205 ---------ILAEERQILTAQRGALLQSLEMLQAQKPRIEAEIVGVQAQRTAEETQLRLI 255

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q  +   + L       +    + +R   ++   +     +   +   + +L        
Sbjct: 256 QAHMEDYEKLMANGLARRYQGIEFQREEARNKGTIARLNSDLARLDLALGDLALRLQEMK 315

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-----TILSPIAGTIVYNQSFS 307
             Y + I  ++++      +  ++L+   + R  +      +++P    ++     +
Sbjct: 316 DTYQRRILAEMQEATTRLTETETQLSSAREIRAARLQVAGALVAPETNEVIRRVVIT 372


>gi|152970327|ref|YP_001335436.1| multidrug resistance secretion protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|150955176|gb|ABR77206.1| multidrug resistance secretion protein [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
          Length = 347

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 78/267 (29%), Gaps = 10/267 (3%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L      + +      D++    L +A ++     L       EK A      N   
Sbjct: 85  RAALAKAAGEVAAQQAALADIQATRQLQQATITGSAASLLAATAATEKLANDNRRYNAL- 143

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                 + ++R+N            E            L  +    +Q     A   + L
Sbjct: 144 AASSAISAQIRDNASADYRRAHAEQEKAKADKTVAERQLAVLDARQQQILAALAQAQANL 203

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            I         I +P  G I  N+   S ++      L+ +VP     +I A     Q+ 
Sbjct: 204 EIARLNLSYTDIRAPFDGVI-GNRRAWSGSFVSSGTQLLSLVPAHG-LWIDANFKENQLA 261

Query: 341 HVKKGYTATVRFPHYADIREKK-----FKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           H++ G   T+      +   K        A   +   + ++      T+    V ++I  
Sbjct: 262 HMRAGQPVTIVADVLPNHTFKGHVASLAPATGSRFSILPAENATGNFTKIVQRVPVRIAL 321

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNTTL 422
                    LR G    V+ T    + 
Sbjct: 322 EGDGAKLDVLRPGL--SVIVTVNEKSP 346



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 48/145 (33%), Gaps = 7/145 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              ++  I S  SG I++  V++   + +G  L+  +D +          ++      + 
Sbjct: 44  VGGDISAISSKVSGYIQQLAVQDNMAVKKGDLLIRIDDRDYRA-------ALAKAAGEVA 96

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +++AL  +     + +         LL          +    Y   +   ++  ++   
Sbjct: 97  AQQAALADIQATRQLQQATITGSAASLLAATAATEKLANDNRRYNALAASSAISAQIRDN 156

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQ 196
            S    R   E + +     ++  Q
Sbjct: 157 ASADYRRAHAEQEKAKADKTVAERQ 181


>gi|39937148|ref|NP_949424.1| HlyD family secretion protein [Rhodopseudomonas palustris CGA009]
 gi|39651006|emb|CAE29529.1| probable membrane fusion protein (HlyD family of secretion
           proteins) linked to ABC efflux pumps [Rhodopseudomonas
           palustris CGA009]
          Length = 358

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/355 (11%), Positives = 86/355 (24%), Gaps = 75/355 (21%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I++  V  G  +  G  L                                        
Sbjct: 59  GRIREILVNEGDFVTAGQVLAR-------------------------------------- 80

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                  ++ + +            + V     +S+      + T   ++   R      
Sbjct: 81  ------MDTDQLEAQRRQAIAQHHRAIVSVDTANSLVAQRAAERTAAIAVIAQR------ 128

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                A L S Q+ L   + L   +AVSQ  L+        +   +     +       I
Sbjct: 129 ----EAQLDSIQRKLGRSERLITTSAVSQQVLDDDRANAEGAKAAVAAAQAQLAAAEAAI 184

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +    +                     +     + +  +       T+ SP  G + Y +
Sbjct: 185 SAANAQVI---------------DAGASVDATQAAVESITVDINDATLKSPRDGRVQY-R 228

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK--- 361
                        ++ +V      Y+   +   Q+  V  G    +       +      
Sbjct: 229 VVQPGEVLSAGGRVLNLVDLGD-VYMTFFLPTAQVGRVPIGAEVRLVLDALPQVVIPAKA 287

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            F A + +  P   + +   Q   +  V   I+         +++ G P      
Sbjct: 288 TFVADVAQFTPKTVETEEERQKLMF-RVKAHISPALLKKYIQQVKTGLPGMAYVK 341


>gi|332289729|ref|YP_004420581.1| HlyD family secretion protein [Gallibacterium anatis UMN179]
 gi|330432625|gb|AEC17684.1| HlyD family secretion protein [Gallibacterium anatis UMN179]
          Length = 278

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 93/266 (34%), Gaps = 16/266 (6%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +F           +++L     I    L   +  K   L        K   ++  L +K 
Sbjct: 20  LFQQHQRQAVNESEIRLYGNVDIRDVNLGFKVAGKVEQLLVDEGDQVKAGDLLATLEQKT 79

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              Q++L   +  +  +   L     + + + + +  L  +  +  A+Y  ++    ++ 
Sbjct: 80  F--QDELTLAKAKLADAEAAL----VQAEKLYQRVQGLIKKNAVSDADY-DDVVAARDRA 132

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                   S ++I E       +++P  G ++  +     +      P+  I    K  +
Sbjct: 133 LAQVDISKSLVSIAETRLADTKLIAPSDGVVLT-RVREKGSVVNAGLPIYSIS-LQKPVW 190

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +RA V    + ++ +G   TV     A      +   I  I P       N+++++    
Sbjct: 191 VRAYVDEPNLGNLYQGQKVTVVTDSGAQ-----YTGQIGFISPQAEFTPKNVESEQLRTE 245

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
           ++    +   +++  LR G P  +L 
Sbjct: 246 LVYRFKVMVENSDNGLRQGMPVTLLI 271



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 4/88 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V+ G Q+  G  L T E     D + L K  + +    +       + L  + 
Sbjct: 53  GKVEQLLVDEGDQVKAGDLLATLEQKTFQDELTLAKAKLADAEAALV----QAEKLYQRV 108

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L K     +    D +       ++V
Sbjct: 109 QGLIKKNAVSDADYDDVVAARDRALAQV 136


>gi|319900146|ref|YP_004159874.1| efflux transporter, RND family, MFP subunit [Bacteroides helcogenes
           P 36-108]
 gi|319415177|gb|ADV42288.1| efflux transporter, RND family, MFP subunit [Bacteroides helcogenes
           P 36-108]
          Length = 368

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 96/293 (32%), Gaps = 55/293 (18%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E R+E L+    +     S+V+     S+ +   +   ++          E++  L +  
Sbjct: 58  EPRDEVLI--KPQISGIISEVYKEAGQSIRQGEVIAKVKVIPELGTLNSAESRVRLAKIS 115

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            +  + D + ++ L++   +S+ +  + E  V                            
Sbjct: 116 ATQAETDFSRIEKLYKDKLISREEYEKGEVTV---------------------------- 147

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                   K+   +L+  +         +T    +     I S I G I+       ++ 
Sbjct: 148 --------KQAREELQTAKDNLEIVKEGITKNSASFSSTLIRSTIDGLILDVPIKVGNSV 199

Query: 312 A-----QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      +  I   +     + K+   ++  V +G    +      ++    F A+
Sbjct: 200 IMSNTFNDGTTIATIANMND-LIFKGKIDETEVGRVHEGMPVKLTIGALQNV---SFNAV 255

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +E I P   +++   Q    +E+   I     + +++++R+G+ A      + 
Sbjct: 256 LEYISPKGVEENGANQ----FEIKAAIA----APDSVQIRSGYSANAEIVLER 300



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 56/166 (33%), Gaps = 23/166 (13%)

Query: 20  MTLLSIIGIIGLITW--------------------SILLPIEISVSSSGEILNEDNVVEI 59
           + + S++ +  L  W                    + +  +E +  ++G++   D V  I
Sbjct: 7   LKIASLVIVAALFVWTFVFLYQKSQPKVIVYETINAEVADLEKTTVATGKVEPRDEV-LI 65

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
           K   SGII +   E G  I QG  +   + I     ++  +  ++     I   ++  DF
Sbjct: 66  KPQISGIISEVYKEAGQSIRQGEVIAKVKVIPELGTLNSAESRVR--LAKISATQAETDF 123

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
              +    +K     E +  +   K      +     +  V   + 
Sbjct: 124 SRIEKLYKDKLISREEYEKGEVTVKQAREELQTAKDNLEIVKEGIT 169


>gi|319786561|ref|YP_004146036.1| efflux transporter RND family, MFP subunit [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465073|gb|ADV26805.1| efflux transporter, RND family, MFP subunit [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 362

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/163 (11%), Positives = 50/163 (30%), Gaps = 10/163 (6%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQRTFADEMSK 279
            + ++   L++          +       A  +   A  L E+     Q +   A   + 
Sbjct: 102 DLAQARASLQQAEASLALAQANYRRADVLAAQQLVSAAQLDELRAARLQAEAQVATARAG 161

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
               +  R+   + +P  G +   +             L++++        RA++  +Q+
Sbjct: 162 RDAAQLRRDYAELRAPSDGIVSR-RLVQPGQVVAAGTELLRLI-RDGRLEWRAELPEQQL 219

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
             V+ G    +      D +      ++  + P +  Q     
Sbjct: 220 ALVEVGNPVEL------DYQGGTVTGVVRAVSPGVDAQARTGT 256



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 42/135 (31%), Gaps = 4/135 (2%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +  SV  SG +   + +          +    V+ G Q+  G  LLT +       +  
Sbjct: 46  QVARSVRVSGPVAAYEEMQLGVELNGLRVTALNVDVGQQVRAGQVLLTLDHRSLDSDLAQ 105

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            + S++     +   ++       + DVL         QL +         ++V      
Sbjct: 106 ARASLQQAEASLALAQANY----RRADVLAAQQLVSAAQLDELRAARLQAEAQVATARAG 161

Query: 159 SVYRSLKMKLTRMRS 173
                L+     +R+
Sbjct: 162 RDAAQLRRDYAELRA 176


>gi|331685252|ref|ZP_08385838.1| inner membrane protein YiaV [Escherichia coli H299]
 gi|331077623|gb|EGI48835.1| inner membrane protein YiaV [Escherichia coli H299]
          Length = 378

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 72/226 (31%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++    EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSAAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSAAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|331660670|ref|ZP_08361602.1| multidrug resistance protein MdtN [Escherichia coli TA206]
 gi|320193460|gb|EFW68097.1| Inner membrane component of tripartite multidrug resistance system
           [Escherichia coli WV_060327]
 gi|331051712|gb|EGI23751.1| multidrug resistance protein MdtN [Escherichia coli TA206]
          Length = 343

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 87/259 (33%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L  +  VS  ++++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R         K 
Sbjct: 222 LKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTLATIRLMS---DSGKT 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  L
Sbjct: 277 FEGKVDSIGYGVLPDDGGL 295



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 42/136 (30%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQASDTLRRTEPLLREGFVSAEEVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSSL 187
               LN + L+ +S+ 
Sbjct: 164 AEADLNAVLLQAQSAA 179


>gi|302038544|ref|YP_003798866.1| putative heavy metal efflux system, membrane fusion protein
           [Candidatus Nitrospira defluvii]
 gi|300606608|emb|CBK42941.1| putative Heavy metal efflux system, membrane fusion protein
           [Candidatus Nitrospira defluvii]
          Length = 410

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 67/206 (32%), Gaps = 27/206 (13%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            LN  +R   ++ L L+E +     + R   E+      +     + +   L        
Sbjct: 149 KLNVADRAFRRAELLLKEKVIGVAELQRREGEMISLRAEQRETRDRLLILGLTDEDLRNL 208

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           D    +      R    +++P  G I+  ++ +     + ++ L  +V      ++ AK+
Sbjct: 209 DRNHTI------RSHVPVVAPFDGRIIA-RNLTKGEVVETTEKLF-VVADLSEVWVTAKI 260

Query: 335 TPKQIQHVKK-----GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
             K I +++      G    V    Y       F+  I  +  ++      ++       
Sbjct: 261 PEKDIPYIQADLEGDGQAVEVHVTAYPGQI---FQGRITYVGDVLDPATRTMRL------ 311

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
                 L  S+   +L+    A V  
Sbjct: 312 -----RLELSNPERKLKPSMYATVRV 332


>gi|240126330|ref|ZP_04739216.1| MacA [Neisseria gonorrhoeae SK-92-679]
 gi|268684915|ref|ZP_06151777.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
 gi|268625199|gb|EEZ57599.1| periplasmic protein [Neisseria gonorrhoeae SK-92-679]
          Length = 391

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++++
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLNME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 83/257 (32%), Gaps = 26/257 (10%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               +++ +Y+       K  L+  + S+ Q +   M+        S+ +  Q + +  +
Sbjct: 64  QASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLNMEK-------SKLETYQAKLVSAQ 116

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             L   E  ++++  L   +    E      + L     ++ + +         +   E 
Sbjct: 117 IALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELKALIRQSKISINTAES 176

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVK 343
                 I + + GT+V             +Q    IV  +   +   + ++    I  VK
Sbjct: 177 DLGYTRITATMDGTVVAIPV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGDITKVK 235

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVILKITD 395
            G    + F   ++      KA ++ +DP ++           +      YY     +  
Sbjct: 236 AGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYARSFVP- 291

Query: 396 LAFSDNNIELRNGFPAE 412
               + + +L  G   +
Sbjct: 292 ----NPDGKLATGMTTQ 304


>gi|205372146|ref|ZP_03224961.1| hypothetical protein Bcoam_01320 [Bacillus coahuilensis m4-4]
          Length = 182

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 67/167 (40%), Gaps = 2/167 (1%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           +  + L++  P  +     + ++ +     W +   ++I+V  S  +      + + S  
Sbjct: 13  YSVEMLEKKPPRFISIFVSVLLLLLGTTFCWLLFSKVDITVKGSVIVEPGKESIPVVSEI 72

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETT-DLIDLKKVSIKNLRCHIDTEKSALDFL-N 121
           S +I K  +++G ++ +G  LL         + I   K  IK L    ++ KS  + + +
Sbjct: 73  SSVIDKSYIQDGMKVEKGDILLELAAQSNEINEIAYIKEEIKELETKQNSFKSVYEAISS 132

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           N ++ ++      EE L     + +   +++    +      + + +
Sbjct: 133 NNFEGIDIIDTMAEELLTSHKEQVNQNKNEILEPKVRIRINKINVII 179


>gi|189519129|ref|XP_001924009.1| PREDICTED: myosin heavy chain, fast skeletal muscle [Danio rerio]
          Length = 1933

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 79/199 (39%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N+    L+K   + ++ L ++  KY    +++   G  
Sbjct: 1414 LEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYEEGQAEL--EGAQ 1471

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   L+    + Q++++ +     +   S ++L +
Sbjct: 1472 KEARSLSTELFKMKNSYEETLD---QLETLKRENKNLQQEISDLTEQIGETGKSIHELEK 1528

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      EI R L +          
Sbjct: 1529 AKKTVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKLAEKDEEIEQIKR 1588

Query: 278  --SKLTILEKTREQKTILS 294
               ++T   ++     + S
Sbjct: 1589 NSQRVTEAMQSTLDSEVRS 1607



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 75/229 (32%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1206 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKS 1263

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++                  R L+ K   +  +   +     +   L+  +    
Sbjct: 1264 DENLRQINDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEV 1323

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1324 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1383

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1384 EELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLMI 1430



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K      L   I+ E+S    L  K   L+   
Sbjct: 1056 EGDLKLAQESIMDLENDKQQSEEKIKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1115

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1116 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1169

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1170 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1224

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +       + +   +LE+  RT  D++S++        ++ 
Sbjct: 1225 KMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKSDENLRQI 1270


>gi|189218544|ref|YP_001939185.1| membrane-fusion protein , contains peptidase family M50 domain
           [Methylacidiphilum infernorum V4]
 gi|189185402|gb|ACD82587.1| Membrane-fusion protein , contains peptidase family M50 domain
           [Methylacidiphilum infernorum V4]
          Length = 731

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 39/126 (30%), Gaps = 8/126 (6%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +     +            + SP  GI+K+  V +G ++  G  LL  E+      + L
Sbjct: 459 KLATVAVAQ-----SQWGQNVSSPEGGIVKEVWVWSGQRVRVGQALLRLENHRVETDLQL 513

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            ++ +      + +          K    E+    + E+      K+     +     + 
Sbjct: 514 ARLDLAMKNLEVSSLGHLSQRTKAKE---EETMAMKVEEFRSMQKKFELALKRKEELVLR 570

Query: 159 SVYRSL 164
           S    +
Sbjct: 571 STIDGI 576



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 47/147 (31%), Gaps = 30/147 (20%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNML-RHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           L + E    ++ L+L       KN+    +  L      +    +     +    Q+ F 
Sbjct: 499 LLRLENHRVETDLQLARLDLAMKNLEVSSLGHLSQRTKAKEEETMAMKVEEFRSMQKKFE 558

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFS-SSNYAQQSQPLMKI---------VPH 324
             + +   L        + S I G +V  +       Y +  + L+KI         VP 
Sbjct: 559 LALKRKEEL-------VLRSTIDGIVVSPEVEKLVGRYFRPGETLLKIRNLELYSFLVPL 611

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVR 351
           +      A++       V  G  A V+
Sbjct: 612 TA---AEARI-------VSPG--AEVK 626


>gi|94496147|ref|ZP_01302725.1| putative HlyD family secretion protein [Sphingomonas sp. SKA58]
 gi|94424326|gb|EAT09349.1| putative HlyD family secretion protein [Sphingomonas sp. SKA58]
          Length = 300

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/214 (10%), Positives = 62/214 (28%), Gaps = 24/214 (11%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + +  + ++  ++           R         +L  A   ++    +E  Q   A+  
Sbjct: 82  RYKLALEEAEAQIASARATLAQARREARRDTALGDLVAAETHEQNLARVETAQAALAEAY 141

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           S         ++  + + + G +         +Y       M ++  S  T +       
Sbjct: 142 SGRDAAALNLKRTQVRASVNGVVTNLDLH-PGDYVGAGSQAMALI-DSDSTRVEGYFEET 199

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ------------- 384
           ++  +  G   TV+        E++    ++ I   I+    +                 
Sbjct: 200 KLPLICIGAPVTVKL----MGEEREIHGRVDSIAYGINDDSRSNAGNLLPSVEPTFSWVR 255

Query: 385 --EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             +   V +++  +      + L +G  A V   
Sbjct: 256 LAQRIPVRVRLEKV---PAGLRLISGRTATVTVQ 286



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 70/237 (29%), Gaps = 21/237 (8%)

Query: 15  ASLKRMTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
            S   + L+    +  +  W     S     +  V +        +VV +    SG++  
Sbjct: 10  RSAATIILVIAALLAAIGMWNHYERSPWTR-DGRVRA--------DVVRVTPDISGLVTS 60

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V +  Q+  G  L   +       ++  +  I + R  +   +          D++  
Sbjct: 61  VAVRDNQQVKAGDLLFVIDTPRYKLALEEAEAQIASARATLAQARREARRDTALGDLVAA 120

Query: 130 AFESR-----EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               +     E         Y    +   N   + V  S+   +T +     + +   ++
Sbjct: 121 ETHEQNLARVETAQAALAEAYSGRDAAALNLKRTQVRASVNGVVTNLDLHPGDYVGAGSQ 180

Query: 185 SSLLRALLSSHQKDL--TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           +  L    S+  +         L    A     L  +ER ++     +   I++   
Sbjct: 181 AMALIDSDSTRVEGYFEETKLPLICIGAPVTVKLMGEEREIHGRVDSIAYGINDDSR 237


>gi|33591996|ref|NP_879640.1| HlyD family secretion protein [Bordetella pertussis Tohama I]
 gi|33571640|emb|CAE41131.1| probable HlyD-family secretion protein [Bordetella pertussis Tohama
           I]
 gi|332381412|gb|AEE66259.1| HlyD family secretion protein [Bordetella pertussis CS]
          Length = 368

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 75/237 (31%), Gaps = 23/237 (9%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               R ++   + D  + +  FE   AV    +  Q         +L     + +N    
Sbjct: 62  LQASRQVVIPAEVDGRIARIAFESGQAVRAGQVLAQLND-APEQGDLARLQAQLRNARSV 120

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +         + A      +  L+Q +  +     ++  ++   EQK + +P  G ++  
Sbjct: 121 LERTRRLVPQQAA-----TAEQLDQARAAYDQAAGEVRRVQALVEQKQVKAPFDG-VLGV 174

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +      + +  +P++ +   ++  Y    +  + ++ ++ G   +V    Y       F
Sbjct: 175 RRVDLGQFVRAGEPVVSLT-DARTMYADITLPEQALRDIRTGQAVSVGVDAYPGR---AF 230

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             ++  I+P +S Q               +      + +  L  G            
Sbjct: 231 DGVVSTIEPQVSAQ-----------ARTLLVCATLPNPDGVLAPGMYVNARVALPER 276



 Score = 43.5 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 42/128 (32%), Gaps = 1/128 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V+ +G    + +   +      G I +   E+G  +  G  L    D      +   +  
Sbjct: 54  VTLAGIGTLQASRQVVIPAEVDGRIARIAFESGQAVRAGQVLAQLNDAPEQGDLARLQAQ 113

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           ++N R  ++  +  +       + L++A  + ++   +          K        V  
Sbjct: 114 LRNARSVLERTRRLVPQQAATAEQLDQARAAYDQAAGEVRRVQALVEQKQVKAPFDGVLG 173

Query: 163 SLKMKLTR 170
             ++ L +
Sbjct: 174 VRRVDLGQ 181


>gi|87125266|ref|ZP_01081112.1| hypothetical protein RS9917_07610 [Synechococcus sp. RS9917]
 gi|86167035|gb|EAQ68296.1| hypothetical protein RS9917_07610 [Synechococcus sp. RS9917]
          Length = 393

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 60/183 (32%), Gaps = 15/183 (8%)

Query: 203 KNLFEKNAVSQNDLNQQE----RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           K L +  A +   + + +      V    L +  +  + +  L ++     +  L +  +
Sbjct: 81  KELVQLAAQASGRILELKISQGDAVAPGQLLVVLDQAQIRAELANLQAQAQKDKLNWERF 140

Query: 259 LKEI------SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
              +      +   ++ +  +      +   E       + SP+ G +   Q     +  
Sbjct: 141 EFLVPQGAASALQRDEYKAQYVASREAVIAKEADLSYSNLRSPVRGIVADVQV-KVGDVI 199

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +   P  +++  +     R +V       ++ G    +  P      +   ++ +  +DP
Sbjct: 200 RSGDPFTQLI-KNNQLEARVEVPSTYSDRIQLGLPVVLSMPG---STKVLAQSTVTSVDP 255

Query: 373 IIS 375
            I+
Sbjct: 256 TIA 258



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 11/106 (10%), Positives = 35/106 (33%), Gaps = 4/106 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I + ++  G  +  G  L+  +  +    +   +   +  + + +      +FL  +
Sbjct: 91  SGRILELKISQGDAVAPGQLLVVLDQAQIRAELANLQAQAQKDKLNWER----FEFLVPQ 146

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                   +  + Q +       +  + +    + S  R +   + 
Sbjct: 147 GAASALQRDEYKAQYVASREAVIAKEADLSYSNLRSPVRGIVADVQ 192


>gi|309778697|ref|ZP_07673471.1| cation efflux system protein CzcB [Ralstonia sp. 5_7_47FAA]
 gi|308922547|gb|EFP68170.1| cation efflux system protein CzcB [Ralstonia sp. 5_7_47FAA]
          Length = 525

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/281 (10%), Positives = 80/281 (28%), Gaps = 23/281 (8%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            GK   T  ++   G+           + ++     R + +  + ++  L    ++    
Sbjct: 184 EGKIELTVDQIAKAGVGVEVAGAAAVQSGVQFPGEIRFNEDRTAHVVPRLAGVVERVPAN 243

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +    +   V     +          L  ++ +   +        L++E      +YL +
Sbjct: 244 IGEQVKSGQVLAVIASTALSEQRSELLAAQKRLSLAQTTYAREKRLWEEKISAEQDYL-Q 302

Query: 262 ISRDLEQNQRTFADEMSKLTI-----LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
               L++ Q    +   KL             +  + +P  G +V     +     ++  
Sbjct: 303 AQTALQEAQIAVQNAQQKLVAIGAAPATTALNRFELRAPFDGMVVEKHL-AIGEAVKEDA 361

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +  I       +    V  K + +V+ G   T+    +           +  +  ++ +
Sbjct: 362 NVFTIS-DLSSVWAEFVVAAKDLGNVRVGQQVTIGSTAFDSKAT----GSVSYVGSLLGE 416

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           Q          +  + + +   +      R G    V    
Sbjct: 417 QTRTA------KARVTLANPGMAW-----RPGLFVTVQVLG 446



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 48/150 (32%), Gaps = 14/150 (9%)

Query: 35  SILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +    ++  V   GEI   ++    +    +G++++     G Q+  G  L         
Sbjct: 204 AGAAAVQSGVQFPGEIRFNEDRTAHVVPRLAGVVERVPANIGEQVKSGQVLAVIAST--- 260

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                   ++   R  +   +  L      Y   ++ +E +     D+L     T  +  
Sbjct: 261 --------ALSEQRSELLAAQKRLSLAQTTYAREKRLWEEKISAEQDYLQA--QTALQEA 310

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              + +  + L        +  LNR +L  
Sbjct: 311 QIAVQNAQQKLVAIGAAPATTALNRFELRA 340


>gi|306840620|ref|ZP_07473372.1| HlyD family secretion protein [Brucella sp. BO2]
 gi|306289358|gb|EFM60594.1| HlyD family secretion protein [Brucella sp. BO2]
          Length = 288

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 78/235 (33%), Gaps = 23/235 (9%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE      RA     Q+ L   ++L  +   +Q  L+     +  +   + ++       
Sbjct: 74  LEAAVRSARAQADDAQRTLLRTRDLARRGVATQAQLDDAATQLEVAEAAIGQSTANL--A 131

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           +  +    +E                   +       ++L   +  R Q+TI +P AG I
Sbjct: 132 VGKLPARPEEIKA---------------AENAVKSAEAQLQAAKWQRAQRTIEAPAAGRI 176

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 +  + A  S P++ ++P      ++  +  ++   V  G         + D   
Sbjct: 177 TDV-VRNPGDIAGPSAPVLTMLP-DGAVKLKVYIPEERFSDVAVGSV----LSVHCDGCA 230

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              +A +  + P        + + E  + ++ + +    D +  L+ G   +V  
Sbjct: 231 PGLQARVSYVSPDPEFTPPVIYSLETRQKLVYLVEAHPVDPDSPLQPGQIVDVDL 285


>gi|145296985|ref|YP_001139806.1| hypothetical protein cgR_2884 [Corynebacterium glutamicum R]
 gi|140846905|dbj|BAF55904.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 662

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 92/298 (30%), Gaps = 26/298 (8%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            +     +   LK    +     I+  ++    LNN    L          LLD      
Sbjct: 216 LDSTMVAESDALKAAREQADAAEIERLRADFGLLNNDRSNLNDVIG-----LLDERESLA 270

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           S  S++     +    ++     ++  +  +   + +K+S   +   ++ +  T ++   
Sbjct: 271 SAESELAQARAAGDLEAVAAAEAKVAGLEQS---IASKTSTWPSQDQTYLQSYTALEEAE 327

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            + A +   L + ERI   S  ++   +   +  +   +    +A L            L
Sbjct: 328 RRVASTTEALEKAERIYIDSLGKVDSELAAAQRAVAEAHSAQQDAALGLETAQLSTQHQL 387

Query: 267 EQNQRTFADEM-----------SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           E         +              + L       T+ SP +G +   Q+       Q +
Sbjct: 388 EAQSSAIDAALGLASVDNEAATRSTSQLRMDINNTTVRSPYSGIVSSVQAAQG----QPA 443

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              +  V       I A V   +I +V  G   T  F        K+F   + K+  I
Sbjct: 444 AGALLSVADDSELKITANVKEAEISNVTIGSRVT--FTT-PSTGTKEFAGRVSKVSLI 498


>gi|167647271|ref|YP_001684934.1| RND family efflux transporter MFP subunit [Caulobacter sp. K31]
 gi|167349701|gb|ABZ72436.1| efflux transporter, RND family, MFP subunit [Caulobacter sp. K31]
          Length = 430

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/145 (9%), Positives = 51/145 (35%), Gaps = 4/145 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + +++ + G +     V  ++   +G+I K     G  +  G  L+  +  +   
Sbjct: 68  AGQTDLPVTIEALGTVTPAATV-TVRPQVAGVITKVLFREGQMVRAGQVLVQIDPRQFEM 126

Query: 95  LIDLKKVSIKNLRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +   + ++      + + +   S    L  +  +  +  +++   +    G   S  + 
Sbjct: 127 DLLQAQGALTRDEAQLASARVTLSRYQTLLAQDSIARQEVDTQAATVKQLQGSVMSDKAA 186

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYL 176
           V    ++  Y  +   ++    + +
Sbjct: 187 VGTARLNLGYARIVAPVSGRVGLRV 211



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/174 (9%), Positives = 53/174 (30%), Gaps = 10/174 (5%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + DL Q +  + +   +L       +  L     L  + ++       + +  ++Q Q +
Sbjct: 125 EMDLLQAQGALTRDEAQL----ASARVTLSRYQTLLAQDSIARQEVDTQAAT-VKQLQGS 179

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL-MKIVPHSKLTYIR 331
              + + +           I++P++G +   +     NY        + ++       + 
Sbjct: 180 VMSDKAAVGTARLNLGYARIVAPVSGRV-GLRVVDVGNYIGSGDAAGVAVITTVSPIDVE 238

Query: 332 AKVTPKQIQHV--KKGYTATVRFPHYADIREKKFK-AIIEKIDPIISQQDNNLQ 382
             V    +  +  +    A +        R           +D ++      ++
Sbjct: 239 FTVPQDDVPRIGARANSGAVLAVTALDRTRTTTLDHGTFSTLDNVVDTGTGTVK 292


>gi|94968096|ref|YP_590144.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
 gi|94550146|gb|ABF40070.1| secretion protein HlyD [Candidatus Koribacter versatilis Ellin345]
          Length = 364

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 3/123 (2%)

Query: 42  ISVSSSGEILN---EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
             V   GE +          I+    G + +  V++G  +  G  L+T + ++    +D 
Sbjct: 49  QQVPQVGEFVATVKSRRSASIQPQVDGSLTRILVKSGDSVRAGQVLMTIDPLKQQATVDQ 108

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           ++ +    +  +D  +  L+     ++    +    E  L ++        +        
Sbjct: 109 QRSTEAQKKATLDYNERELERQKALFESGVTSKRDYEIALQNYQNSKADWEASTAARVTQ 168

Query: 159 SVY 161
              
Sbjct: 169 QRQ 171



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 82/283 (28%), Gaps = 25/283 (8%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++ L   +    +AL  L N      +A +   + L                  +++V
Sbjct: 2   AGLRKLSVLLAFAFAALCLLTNVACTSTEAKQPAPQALPVKTSSIQLQQVPQVGEFVATV 61

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                  +       L R+ L      +RA      + L  +  L ++  V Q    + +
Sbjct: 62  KSRRSASIQPQVDGSLTRI-LVKSGDSVRAG-----QVLMTIDPLKQQATVDQQRSTEAQ 115

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +       E    +  QK +         +  +   NY          ++  +    +  
Sbjct: 116 KKATLDYNE--RELERQKALFESGVTSKRDYEIALQNYQN--------SKADWEASTAAR 165

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              ++      + +P AG +         +Y    Q L+  V  +        +   +  
Sbjct: 166 VTQQRQLAYYNLTAPFAGIVGDIPVH-IGDYVSP-QTLLTTVDENAELEAYIYIPTDRTA 223

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            ++ G    +       +  K       K+D I  Q DN LQ 
Sbjct: 224 DIRMGLPVQI-------VTSKGELIEATKVDFISPQVDNALQG 259


>gi|332260804|ref|XP_003279471.1| PREDICTED: keratin, type I cuticular Ha8 [Nomascus leucogenys]
          Length = 456

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 86/212 (40%), Gaps = 5/212 (2%)

Query: 83  PLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            ++  ++ +   D   +K  S ++LR  ++ +K     L +   + +   E+++E L + 
Sbjct: 175 LIVQIDNAKLAADDFRIKLESERSLRQLVEADKCGTQKLLDDATLAKADLEAQQESLKEE 234

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                S   +      S +   L+++L    +I LNR+ L    +   A+L ++++D+  
Sbjct: 235 QLSLKSNHEQEVKILRSQLGEKLRIELDIEPTIDLNRV-LGEMRAQYEAMLETNRQDVEQ 293

Query: 202 MKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                +   +S  D++  E +       LELR  ++  +   +  + L D          
Sbjct: 294 WFQ-AQSEGISLQDMSCSEELQCCQSEILELRCTVNALEVERQAQHTLKDCLQNSLCEAE 352

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +L Q Q   ++   +L+ +    E++ 
Sbjct: 353 DRFGTELAQMQSLISNVEEQLSEIRADLERQN 384


>gi|326437002|gb|EGD82572.1| hypothetical protein PTSG_03224 [Salpingoeca sp. ATCC 50818]
          Length = 1325

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 67/204 (32%), Gaps = 3/204 (1%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D     L       +      +   + ALD      + L+K   S +E+  D    Y   
Sbjct: 910  DTIQQRLRAAMSEQLGEREARVVEREKALDEA---MESLKKQQLSLDEERRDMQRVYAKL 966

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              ++         R  ++     R     +   + ++  ++       +  ++ + L  +
Sbjct: 967  EVELREQRTQLEQRQWRLTQDEARVQANQQAIDDQRAVAMQQSQEERAQIQSLREALSRE 1026

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                  +LN Q R + +    +++   E +   R   +   E   +    +  + ++  Q
Sbjct: 1027 RREMLRELNDQRRDLAEERASVKQAKREAELRDRRKTDEMMETTAQVEKAMASVHQEQLQ 1086

Query: 269  NQRTFADEMSKLTILEKTREQKTI 292
             ++  +    +   LEK + +  +
Sbjct: 1087 IEQRSSALKRQERELEKVKRRLKL 1110



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 70/201 (34%), Gaps = 2/201 (0%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E    +  ++ ++      +  ++ +LD        +    E    +    L +     +
Sbjct: 926  EREARVVEREKALDEAMESLKKQQLSLDEERRDMQRVYAKLEVELREQRTQLEQRQWRLT 985

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKN 209
            +      ++       +   M+     R  +++    L        ++L   + +L E+ 
Sbjct: 986  QDEARVQANQQAIDDQRAVAMQQSQEERAQIQSLREALSRERREMLRELNDQRRDLAEER 1045

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            A  +    + E    + T E+ E   + +  +  +++   +   + ++ LK   R+LE+ 
Sbjct: 1046 ASVKQAKREAELRDRRKTDEMMETTAQVEKAMASVHQEQLQIE-QRSSALKRQERELEKV 1104

Query: 270  QRTFADEMSKLTILEKTREQK 290
            +R    E  +L    +   + 
Sbjct: 1105 KRRLKLERERLAEERQQLMET 1125



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 74/205 (36%), Gaps = 6/205 (2%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            LL  +D E   +    KV I +L           +   ++ D+ +    S+++       
Sbjct: 830  LLKRKDAEIESIRQSHKVEIADLEASHSLVLQTREQ-QHQADLAQVRELSKQQVASALEN 888

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K ++   +V    + +    +     R+R+    +L  E ++ ++    +  +     M+
Sbjct: 889  KENAEGIRVLLSQLKNTTEGVDTIQQRLRAAMSEQLG-EREARVVEREKALDE----AME 943

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            +L ++      +    +R+  K  +ELRE   + +     + +              + +
Sbjct: 944  SLKKQQLSLDEERRDMQRVYAKLEVELREQRTQLEQRQWRLTQDEARVQANQQAIDDQRA 1003

Query: 264  RDLEQNQRTFADEMSKLTILEKTRE 288
              ++Q+Q   A   S    L + R 
Sbjct: 1004 VAMQQSQEERAQIQSLREALSRERR 1028


>gi|193077306|gb|ABO12097.2| Secretion protein HlyD [Acinetobacter baumannii ATCC 17978]
          Length = 340

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/350 (13%), Positives = 110/350 (31%), Gaps = 37/350 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSIL--LPIEISVSSS-GEILNEDNVVEIKSPF-SGIIKKFQV 72
           +  + ++  +  IG   W       ++  V +  G +          +   SG I+K  V
Sbjct: 6   IAGILVVIAVVAIGFWVWGYNHKKQLDNDVLTLYGNVDI---RQVSLAFEQSGRIQKLLV 62

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G ++  G  L T             +  +K  +  I         +  +     +   
Sbjct: 63  QEGDKVQAGQVLATLNTNALQIQAKQAQAQLKAQQEAI---------IKQEVGARPEEIT 113

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             + QL     +   T   +    +  +  S   +    + +   + +  +  + +R   
Sbjct: 114 QAKAQLASAQAELDKTNKNL--QRLQILVSSTDGRAISQQELDYAKSNQHSAEAAVRERQ 171

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK---STLELRENIHEQKNMLRHINELYD 249
           ++ +  +   +    +   +Q ++ +    + K   +  ELR  ++    +   + E+ D
Sbjct: 172 ANLELLIKGARKEDREATRAQYEVTKANLDLIKYNLTQAELRSPVNAV--VRARLQEVGD 229

Query: 250 EANLEFANY-LKEISRDLEQNQRTFADEMS-KLTILEKTREQKTILSPIAGTIVYNQS-- 305
               + A Y L   +    +      D  S K+    +         PI G I Y  S  
Sbjct: 230 MTTAQKAVYTLALTNPKWIRVYVNEQDLSSIKMGGTAQVIRDAYPNQPINGKIGYISSVA 289

Query: 306 -FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFP 353
            F+      Q++ +              +V        +K G   TV+ P
Sbjct: 290 EFTPKTV--QTEEI------RTTLVYEVRVYVNDPNDQLKMGQPVTVKVP 331



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 88/246 (35%), Gaps = 35/246 (14%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTLELRE 232
                 + + +  +A L    K+L  ++ L       A+SQ +L+  +   + +   +RE
Sbjct: 110 EEITQAKAQLASAQAELDKTNKNLQRLQILVSSTDGRAISQQELDYAKSNQHSAEAAVRE 169

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                + +++   +   EA                  +  +    + L +++    Q  +
Sbjct: 170 RQANLELLIKGARKEDREA-----------------TRAQYEVTKANLDLIKYNLTQAEL 212

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+   +V  +     +    +Q  +  +  +   +IR  V  + +  +K G TA V  
Sbjct: 213 RSPVNA-VVRARLQEVGD-MTTAQKAVYTLALTNPKWIRVYVNEQDLSSIKMGGTAQVIR 270

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRN 407
             Y +         I  I  +       +QT+E      YEV + + D      N +L+ 
Sbjct: 271 DAYPNQ---PINGKIGYISSVAEFTPKTVQTEEIRTTLVYEVRVYVNDP-----NDQLKM 322

Query: 408 GFPAEV 413
           G P  V
Sbjct: 323 GQPVTV 328


>gi|220934741|ref|YP_002513640.1| RND family efflux transporter MFP subunit [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219996051|gb|ACL72653.1| RND family efflux transporter MFP subunit [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 415

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 84/245 (34%), Gaps = 28/245 (11%)

Query: 105 NLRCHIDTEKSALDFLNNKYDVLE-KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +L  H+ T ++A      + DVLE    E R  +    L +       +      +    
Sbjct: 60  SLYGHVTTPRTANLRAAVEADVLETPGEEGRRVEAGQVLVRLDDREIGLLVTQREADVAD 119

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           ++ +++  R       +         ALL    +++   ++LF +   SQ+ L++  R  
Sbjct: 120 IRAQISAERLRNARDREA---LKHDEALLEIAWRNVERAQDLFARKLGSQSALDEARRAH 176

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +  L +       ++    + +L  EA    A  L                    L   
Sbjct: 177 EQQALAVNARRLALEDFQARLAQL--EARARRAEAL--------------------LEDA 214

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               E+  + +P AG +      +  +  +   PL  +   +    +RA++    +  V+
Sbjct: 215 RLDLERTRVRAPFAGRVSRLAV-APGDRVRIGDPLATLF-DADALEVRARIPALYLPVVR 272

Query: 344 KGYTA 348
           +G  A
Sbjct: 273 RGLDA 277



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 54/137 (39%), Gaps = 7/137 (5%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK----SALDFLNNKYDVLE 128
           E G ++  G  L+  +D E   L+  ++  + ++R  I  E+       + L +   +LE
Sbjct: 87  EEGRRVEAGQVLVRLDDREIGLLVTQREADVADIRAQISAERLRNARDREALKHDEALLE 146

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR--MRSIYLNRLDLENKSS 186
            A+ + E    D   +   + S +     +   ++L +   R  +         LE ++ 
Sbjct: 147 IAWRNVERA-QDLFARKLGSQSALDEARRAHEQQALAVNARRLALEDFQARLAQLEARAR 205

Query: 187 LLRALLSSHQKDLTMMK 203
              ALL   + DL   +
Sbjct: 206 RAEALLEDARLDLERTR 222


>gi|10764643|gb|AAG22807.1|AF297012_1 putative membrane fusion protein precursor MfpA [Pseudomonas
           syringae pv. syringae]
          Length = 400

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 67/204 (32%), Gaps = 24/204 (11%)

Query: 35  SILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           + +  IE +VS+ G +  +      + +  SG ++  +V+ G Q+ +   L   + +   
Sbjct: 50  AEVTDIEYAVSAQGVL--QGRNQVDVGAQVSGQLQSLKVKPGDQVKKNQLLAEIDPLPAR 107

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNN-----------------KYDVLEKAFESREE 136
           + +    V I+ L    D     L    +                   D      E++  
Sbjct: 108 NALRQAVVKIEQLTAERDATLHRLKLAESNDRRYQELGATTAVSKADQDKARFELETQRA 167

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            L+    + H+   +     I   Y  +   +       + +       +++    +   
Sbjct: 168 NLVSLTAQLHTARVQEEAARIKLDYTRIFAPMDGQVLAIVTQEG----QTVIADQTAPVI 223

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQE 220
             +  +  +  K  VS+ D+ + +
Sbjct: 224 LKMAQLDTMTVKAQVSEADVLKIK 247



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/332 (11%), Positives = 94/332 (28%), Gaps = 26/332 (7%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++++K+ ++ +   +    +   F        E AF S   ++ D      +        
Sbjct: 10  LNVRKILLRIVLIDLTVSLAGYAFYKGASGEEETAFLSAAAEVTDIEYAVSAQGVLQGRN 69

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +      +  +++        +   + K + L A +        +      + AV + +
Sbjct: 70  QVD-----VGAQVSGQLQSLKVKPGDQVKKNQLLAEIDPLPARNAL------RQAVVKIE 118

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
               ER      L+L E+   +   L     +      +    L+    +L         
Sbjct: 119 QLTAERDATLHRLKLAESNDRRYQELGATTAVSKADQDKARFELETQRANLVSLTAQLHT 178

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAK 333
              +        +   I +P+ G ++              Q    I+         ++A+
Sbjct: 179 ARVQEEAARIKLDYTRIFAPMDGQVLAI-VTQEGQTVIADQTAPVILKMAQLDTMTVKAQ 237

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKF-----KAIIEKIDPIISQQDNNLQTQEYYE 388
           V+   +  +K G       P   D R            ++      +  ++      +Y 
Sbjct: 238 VSEADVLKIKPGLAIYFTIPGDPDTRYNATLKAIEPGPVDAASQTGATAESGKAV--FYN 295

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +  + +L    N   +     A V    +  
Sbjct: 296 ALFDVLNLE---NRFYIN--MTANVRIVLEAK 322


>gi|299069522|emb|CBJ40791.1| transmembrane multidrug efflux system, putative component of
           acridine efflux pump [Ralstonia solanacearum CMR15]
          Length = 438

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 41/119 (34%), Gaps = 3/119 (2%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            VE++    G I     ++GS + +G PL T +       +   + ++   +  +    S
Sbjct: 69  RVEVRPLVGGTITAVHFKDGSIVRKGDPLFTIDPRPYAAEVARTQAALTAAKSRVAYTAS 128

Query: 116 ALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            L+    L     +  + FE +E    +         + +    ++  Y  +   +   
Sbjct: 129 ELERAQKLVADNAIARREFEEKENAAREAQANLQGAAAALDAAKLNLEYTRIVAPVAGR 187



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/131 (12%), Positives = 37/131 (28%), Gaps = 10/131 (7%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +    +  +    + L    +L  +  +    + +E      + Q       + L   
Sbjct: 113 QAALTAAKSRVAYTASELERAQKLVADNAIARREF-EEKENAAREAQANLQGAAAALDAA 171

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +   E   I++P+AG +   +  +  N            P          V+P  +    
Sbjct: 172 KLNLEYTRIVAPVAGRVSRAEI-TVGNVVATGGAA----PVLTTLV---SVSPMYVAF-D 222

Query: 344 KGYTATVRFPH 354
                 +RF  
Sbjct: 223 ADEQTYLRFSA 233


>gi|296444432|ref|ZP_06886397.1| efflux transporter, RND family, MFP subunit [Methylosinus
           trichosporium OB3b]
 gi|296258079|gb|EFH05141.1| efflux transporter, RND family, MFP subunit [Methylosinus
           trichosporium OB3b]
          Length = 391

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 71/220 (32%), Gaps = 21/220 (9%)

Query: 204 NLFEKNAVSQNDLNQQERIVY-KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           +L     V +      E++   +  LELR++    +      +       L       ++
Sbjct: 87  SLEVAGIVEKIHFQSGEQVAEGQLLLELRKDTDTTRLASLQASADLAGITLRRDQSQLKL 146

Query: 263 ----SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
                  ++ +        +++   E    QKT+ +P AG  +  +S     Y      +
Sbjct: 147 HATSQATVDTDVANLKSADAQVAQQEAVIAQKTLRAPFAGR-LGIRSVDLGQYIGAGSVI 205

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + +       ++   +  + +  V+ G         +     KKF   I  I+  + Q  
Sbjct: 206 VTLQALD-PIFLDFLLPQQALNGVEVGQPIDANVDAFP---GKKFTGKIVAINSKVDQAS 261

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            N+Q              + ++ + +L  G  AE+     
Sbjct: 262 RNVQV-----------RASLANADHKLTPGMFAEIDIVTG 290



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 36/119 (30%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI++K   ++G Q+ +G  LL       T  +   + S       +  ++S L       
Sbjct: 92  GIVEKIHFQSGEQVAEGQLLLELRKDTDTTRLASLQASADLAGITLRRDQSQLKLHATSQ 151

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             ++    + +        +      K      +       + L +        + L+ 
Sbjct: 152 ATVDTDVANLKSADAQVAQQEAVIAQKTLRAPFAGRLGIRSVDLGQYIGAGSVIVTLQA 210


>gi|167033335|ref|YP_001668566.1| RND family efflux transporter MFP subunit [Pseudomonas putida GB-1]
 gi|166859823|gb|ABY98230.1| efflux transporter, RND family, MFP subunit [Pseudomonas putida
           GB-1]
          Length = 436

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 59/149 (39%), Gaps = 7/149 (4%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +    N V ++S  +G + K   + G Q+  G  L   +       +   + ++  
Sbjct: 84  ALGTVTA-TNTVNVRSRVAGELVKIHFKEGQQVKAGDLLAEIDPRSYRIALQQAEGTLAQ 142

Query: 106 LRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            +  +   +  L     L  +  + ++  ++ E Q+  F G   +  ++V +  ++  + 
Sbjct: 143 NQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVNDARLNLDFT 202

Query: 163 SLKMKLT---RMRSIYLNRLDLENKSSLL 188
            ++  +     +R + L  L   N ++ L
Sbjct: 203 QIRSPINGRVGLRQLDLGNLVAANDATAL 231


>gi|94312512|ref|YP_585722.1| secretion protein HlyD [Cupriavidus metallidurans CH34]
 gi|93356364|gb|ABF10453.1| putative multidrug RND transporter, membrane fusion protein
           (AcrA-MtdA-HylD family) [Cupriavidus metallidurans CH34]
          Length = 407

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/205 (8%), Positives = 67/205 (32%), Gaps = 24/205 (11%)

Query: 36  ILLPIEISVSSSGEI---------LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
            +  +  ++   G++         +     VE++   S  ++   ++ G  +  G  L +
Sbjct: 62  AVTTVATAIVQQGDVPLEVNANGNVVAMQTVEVRPQVSSTVRTVHIKEGQSVKPGDLLFS 121

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLG 143
            +       +D  +  +   +  +   +  L     L  +  +   A ++ + ++  F  
Sbjct: 122 LDTRMDEANLDKARAQLMRDQADLSDARRTLTRSQELLQRNFISRSAVDTAQAKVDGFEA 181

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY------------LNRLDLENKSSLLRAL 191
              +  + +    ++  Y +++  +     +                + +  + + +  +
Sbjct: 182 TIRADQAAIEASRVAISYGTIRATIGGRTGVINVFPGSLVTPTTATPMVIVAQIAPITVM 241

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDL 216
            +  ++ L  ++       VS   L
Sbjct: 242 FTLPERQLAALREALRSGPVSVTAL 266


>gi|297288122|ref|XP_002803288.1| PREDICTED: huntingtin-interacting protein 1-like [Macaca mulatta]
          Length = 986

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 67/196 (34%), Gaps = 10/196 (5%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV---- 152
           D K   I+ L   I   K+ L+ +  +   +    + R  +L   L +      +     
Sbjct: 371 DEKDHLIERLYREISGLKAQLENMKTESQRVVLQLKGRVSELEAELAEQQHLRQQAADDC 430

Query: 153 --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 +  + R  +      RS+       +        L   + + +    +L  KNA
Sbjct: 431 EFLRAELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNA 490

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
               ++ +Q  +  ++ ++L     + ++ L  I++       E    L+ + ++L  +Q
Sbjct: 491 ----EVTKQVSMARQAQVDLEREKKQLEDSLERISDQGQRKTQEQLEVLESLKQELATSQ 546

Query: 271 RTFADEMSKLTILEKT 286
           R        L    ++
Sbjct: 547 RELQVLQGSLETSAQS 562



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 73/211 (34%), Gaps = 18/211 (8%)

Query: 91  ETTDLIDLKKVSIKNLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +  D  +  +  +  LR    DTEK+      ++ +   +A E R  +L +   +     
Sbjct: 425 QAADDCEFLRAELDELRRQREDTEKAQRSL--SEIERKAQANEQRYSKLKEKYSELVQNH 482

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL-RALLSSHQKDLTMMKNLFEK 208
           + +     + V + + M       +   +  LE+    +        Q+ L ++++L   
Sbjct: 483 ADLLRKN-AEVTKQVSMARQAQVDLEREKKQLEDSLERISDQGQRKTQEQLEVLESL--- 538

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA------NLEFANYLKEI 262
               + +L   +R +      L  +   + N    I EL  E              L  +
Sbjct: 539 ----KQELATSQRELQVLQGSLETSAQSEANWAAQIAELEKERDSLVSGAAHRDEELSAL 594

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            R+L+  Q   A     +  L K + +  ++
Sbjct: 595 RRELQDTQLKLASTEESMCQLAKDQRKMLLV 625


>gi|293409957|ref|ZP_06653533.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291470425|gb|EFF12909.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 288

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 62  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNVIS 120

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 121 AEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 179

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 180 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 230

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 231 RAIYDQS 237



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 50/177 (28%), Gaps = 21/177 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 4   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 59

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  +++   +  G  LLT +              I  L       K+  D        L 
Sbjct: 60  ELNIKDNQLVNAGDLLLTIDKTPF---------QIAELNAQAQLAKAQSD--------LA 102

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           KA      +         +      N  + ++  S+      ++         E ++
Sbjct: 103 KANNEANRRRHLSQNVISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 159


>gi|256061712|ref|ZP_05451849.1| efflux transporter, RND family, MFP subunit [Brucella neotomae
           5K33]
 gi|261325718|ref|ZP_05964915.1| efflux transporter [Brucella neotomae 5K33]
 gi|261301698|gb|EEY05195.1| efflux transporter [Brucella neotomae 5K33]
          Length = 408

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 15/210 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q D  + + +   + L L++    ++  L     +      +    L     +++    
Sbjct: 127 AQLDNLKAQLLSKDAQLTLKKLNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNA 186

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
               + ++L   +      +I SP+ GT+V   +          Q    IV  + L    
Sbjct: 187 QIRQQEAQLASDKVDLGYTSIYSPMEGTVVDEAA-KEGETLNAVQSAPTIVTVADLKVMT 245

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A+V+   I  +K G      F        K+F   + +I P  +  +N +     Y  
Sbjct: 246 VEAQVSEADISKLKPGMPVY--FTLLGQPD-KRFTGTLRQIKPTPATDNNVVL----YYA 298

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  + +L       EL     A+V F    
Sbjct: 299 LFDVPNLT-----GELMIDMSAQVYFVLGE 323



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 10/141 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE ++++ G + +    V + +  SG +K  +VE G  + QG  +   +       +++ 
Sbjct: 67  IENAITAVGTL-SALRSVNVGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIA 125

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + NL+  + ++ + L         L+K   +R++ LL   G   +T  +  N  +  
Sbjct: 126 GAQLDNLKAQLLSKDAQL--------TLKKLNAARQKSLLATRGVSQATVDQA-NADLLM 176

Query: 160 VYRSLKMKLTRMRSIYLNRLD 180
               +K    ++R        
Sbjct: 177 AEAEVKALNAQIRQQEAQLAS 197


>gi|218702354|ref|YP_002409983.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli IAI39]
 gi|218372340|emb|CAR20210.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli IAI39]
          Length = 378

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 72/226 (31%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARMDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++    EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSAAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARMDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSAAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|114049001|ref|YP_739551.1| RND family efflux transporter MFP subunit [Shewanella sp. MR-7]
 gi|113890443|gb|ABI44494.1| efflux transporter, RND family, MFP subunit [Shewanella sp. MR-7]
          Length = 430

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 54/158 (34%), Gaps = 4/158 (2%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             V K+  E      E   + R        +    A    E+ R + +  +   +++  L
Sbjct: 156 AEVAKAQAEYINAAAEWNRVRRMSESAVSVSRRMQAQVDAELKRAILEAIKMTDEQIRTL 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
               +      +L+PI G +  + +           PLM++       ++ A++TP Q  
Sbjct: 216 ESTPEAIGSYQLLAPIDGRVQQDIAM-LGQVFTAGTPLMQLT-DESHLWVEAQLTPAQAA 273

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +V  G  A V+          K      ++D +   + 
Sbjct: 274 NVNVGGPALVQVG--DKTLAGKIIGRSHELDSVTRTEQ 309



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/144 (11%), Positives = 49/144 (34%), Gaps = 2/144 (1%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDIE-TT 93
            L  + +   ++  ++ + +     +P   + ++   V  G ++ +G PLLT    E   
Sbjct: 101 SLSNLNLDTMATATLVVDRDRTATLAPQLDVRVQARHVVPGQEVKKGEPLLTLGGAEVAK 160

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              +    + +  R    +E +       +  V  +   +  E +     +  +  S   
Sbjct: 161 AQAEYINAAAEWNRVRRMSESAVSVSRRMQAQVDAELKRAILEAIKMTDEQIRTLESTPE 220

Query: 154 NYGISSVYRSLKMKLTRMRSIYLN 177
             G   +   +  ++ +  ++   
Sbjct: 221 AIGSYQLLAPIDGRVQQDIAMLGQ 244


>gi|333004445|gb|EGK23975.1| multidrug resistance protein A domain protein [Shigella flexneri
           VA-6]
          Length = 215

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 62/172 (36%), Gaps = 5/172 (2%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            N+  + S  SG I   +V +   + +G  +L  +D +    +   +  IK+ + +++  
Sbjct: 44  GNITTVASKVSGYISAIEVRDNQSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLEGI 103

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL--KMKLTRM 171
           ++ +     +  +++ A E+ +    +   +   T         +++ + +    +    
Sbjct: 104 QATITM---QQSIIQSASETWQAVKHEEQKRLRDTERYEKLAQSAAISQQIIDNARFDYQ 160

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +     R    +     + L     ++  +  ++ E  A     L   E  +
Sbjct: 161 KVAAKERKAANDFLVEKQRLAVLSAQEENVRASIEEVQAALTQALLDLEYTL 212


>gi|293390992|ref|ZP_06635326.1| AcrA protein [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290951526|gb|EFE01645.1| AcrA protein [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 371

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 92/273 (33%), Gaps = 19/273 (6%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  ++  SG I  +++V    +     I+   VE G  + +G  L T E       + 
Sbjct: 45  ATLTQTLRLSGSITAKEDVAVGTALLGLQIQTINVEVGDVVKKGQVLATLETSNVQSQLR 104

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
               +++  + ++ +++SAL          +   +S      D + +      +      
Sbjct: 105 QNDANLQRAKANLASQQSALTEAEATLKRYQTLMKS------DAISRQELEQQQAKARAA 158

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            +  ++   ++ ++ +   +      K+ +L        +    + NL + NA+      
Sbjct: 159 RAAVQAANAEIAQVLAQLDDSHHQRKKAEVLAPADGIIMQRRAEVGNLTDSNAL------ 212

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                      EL   +      L  + +   +A ++  +       +L  +Q       
Sbjct: 213 ----FHLARNGELEATVEASAEDLS-LLKTGLQAEVQVLDQTTSGQINLLSSQIDQTSRT 267

Query: 278 SKLTILEKTREQKTILSPIAGTIV--YNQSFSS 308
            K+ I  +   Q T+ +P    I     Q+ ++
Sbjct: 268 GKVRIQLQNPTQITLGTPATAIIKLPEMQAHTT 300


>gi|148925963|ref|ZP_01809650.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145844949|gb|EDK22053.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 633

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  ++ + G++  +D V ++ +  SG I K  V+ G+ + QG  +   +  +  + +D+ 
Sbjct: 42  ISQTIEAVGKVYAKDQV-DVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDIT 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +++ + +++++K AL+  N +Y   +K + ++   L +   + ++  +      ++ 
Sbjct: 101 KAQLESAKANLESKKVALEIANKQYQREQKLYAAKASSLENLETQKNNYYT--LKANVAE 158

Query: 160 VYRSLKMKLTRMRSIY 175
           +   +      +++  
Sbjct: 159 LNAQVVQLEITLKNAQ 174



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 6/167 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q +  +      K  LE+    ++++  L        E      N    +  ++ +   
Sbjct: 102 AQLESAKANLESKKVALEIANKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELNA 161

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHSKLTY 329
                   L   +K     TI +P+ G ++             +Q    IV   +     
Sbjct: 162 QVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVD-EGQTVNANQNTPTIVRIANLDEME 220

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           +R ++    +  +K G    + F    D  +K + A I  IDP  ++
Sbjct: 221 VRMEIAEADVSKIKVG--TELDFSLLND-PQKTYHAKIASIDPADTE 264


>gi|50949258|emb|CAH10351.1| hHa8 protein [Homo sapiens]
          Length = 439

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 86/212 (40%), Gaps = 5/212 (2%)

Query: 83  PLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            ++  ++ +   D   +K  S ++LR  ++ +K     L +   + +   E+++E L + 
Sbjct: 158 LIVQIDNAKLAADDFRIKLESERSLRQLVEADKCGTQKLLDDATLAKADLEAQQESLKEE 217

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                S   +      S +   L+++L    +I LNR+ L    +   A+L ++++D+  
Sbjct: 218 QLSLKSNHEQEVKILRSQLGEKLRIELDIEPTIDLNRV-LGEMRAQYEAMLETNRQDVEQ 276

Query: 202 MKNLFEKNAVSQNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                +   +S  D++  E +       LELR  ++  +   +  + L D          
Sbjct: 277 WFQ-AQSEGISLQDMSCSEELQCCQSEILELRCTVNALEVERQAQHTLKDCLQNSLCEAE 335

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +L Q Q   ++   +L+ +    E++ 
Sbjct: 336 DRFGTELAQMQSLISNVEEQLSEIRADLERQN 367


>gi|116748526|ref|YP_845213.1| RND family efflux transporter MFP subunit [Syntrophobacter
           fumaroxidans MPOB]
 gi|116697590|gb|ABK16778.1| efflux transporter, RND family, MFP subunit [Syntrophobacter
           fumaroxidans MPOB]
          Length = 429

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 81/231 (35%), Gaps = 35/231 (15%)

Query: 211 VSQNDLNQQERIVYKSTLELRE----------NIHEQKNMLRHINELYDEANLEF----- 255
           +++ D ++ E  V +S   L             + E ++ L  + ++   ++ +      
Sbjct: 112 LAKLDTSKLEAQVTQSKAALESAKAKVLLAEATVRETRSKLTQLRKVRALSDNKVPSQTE 171

Query: 256 ----ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                  L     D+   + T +   + L   +    +  I SP+ G ++  +S      
Sbjct: 172 IDAAEAALDRALADVASAKATVSQAQATLDANQTDLSKAVIRSPVNGIVLT-RSAEPGQT 230

Query: 312 AQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
              +     L  +        +   V    + H+++G  AT     Y +     F+A I 
Sbjct: 231 VAATLNPPVLFTLAEDLTKMELVVNVDEADVGHIREGQQATFSVAAYPNRT---FEAQIV 287

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +     S+  + + T   YE +LK+ ++     ++ LR G  A      K 
Sbjct: 288 Q-ARFGSKTTSGVVT---YETVLKVDNV-----DLALRPGMTATADIIVKR 329



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 57/142 (40%), Gaps = 3/142 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + V+++G +   + V ++ S  SGIIK  + +  S++  G PL   +  +    +   
Sbjct: 69  LTVIVTATGTLQATNQV-DVSSELSGIIKTVEADYNSKVKVGQPLAKLDTSKLEAQVTQS 127

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K ++++ +  +   ++ +    +K   L K     + ++               +  ++ 
Sbjct: 128 KAALESAKAKVLLAEATVRETRSKLTQLRKVRALSDNKVPSQTE--IDAAEAALDRALAD 185

Query: 160 VYRSLKMKLTRMRSIYLNRLDL 181
           V  +         ++  N+ DL
Sbjct: 186 VASAKATVSQAQATLDANQTDL 207


>gi|313204874|ref|YP_004043531.1| efflux transporter, rnd family, mfp subunit [Paludibacter
           propionicigenes WB4]
 gi|312444190|gb|ADQ80546.1| efflux transporter, RND family, MFP subunit [Paludibacter
           propionicigenes WB4]
          Length = 340

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 81/223 (36%), Gaps = 30/223 (13%)

Query: 196 QKDLTMMKNLFEKN-AVSQNDLNQQ--ERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           Q   T++K L     AV +  L     +               + K+    + +++D  +
Sbjct: 62  QTTGTVLKVLVNAGDAVRKGQLLATVDKADALSMYEVANAKYKQAKDAYNRLKDVHDNGS 121

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS--N 310
           L    ++ E+  +L+Q Q + A       + +    +  + +P  G I   ++      +
Sbjct: 122 LSEIKWV-EMESNLQQAQSSAA-------LAKNNLTKCALYAPDNGVI-GRRNIEPGMSS 172

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                 PL ++V   +  Y++  V   +I  +KKG  AT +     D   K F   +  +
Sbjct: 173 LGNPVAPL-ELVKI-ETVYVKISVPENEIGKIKKGLKATFKVSALQD---KVFDGTVTNV 227

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             +  Q          YEV + +      +  + L+ G   +V
Sbjct: 228 GVVADQISRT------YEVKITV-----KNPGLLLKPGMVCDV 259



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 68/183 (37%), Gaps = 19/183 (10%)

Query: 44  VSSSGEILNEDNVVEIKS-----PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           V+  G +    ++   ++       +G + K  V  G  + +G  L T +  +   + ++
Sbjct: 39  VTGEGNLHYSGSIEAFQTIPLTFQTTGTVLKVLVNAGDAVRKGQLLATVDKADALSMYEV 98

Query: 99  KKVSIKNLRCHIDTEKSALD-FLNNKYDVLEKAFESREEQLLDFLGKYHSTC-------- 149
                K  +   +  K   D    ++   +E     ++ Q    L K + T         
Sbjct: 99  ANAKYKQAKDAYNRLKDVHDNGSLSEIKWVEMESNLQQAQSSAALAKNNLTKCALYAPDN 158

Query: 150 ----SKVFNYGISSVYRSL-KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                +    G+SS+   +  ++L ++ ++Y+     EN+   ++  L +  K   +   
Sbjct: 159 GVIGRRNIEPGMSSLGNPVAPLELVKIETVYVKISVPENEIGKIKKGLKATFKVSALQDK 218

Query: 205 LFE 207
           +F+
Sbjct: 219 VFD 221


>gi|301058968|ref|ZP_07199937.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [delta proteobacterium NaphS2]
 gi|300446964|gb|EFK10760.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [delta proteobacterium NaphS2]
          Length = 348

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/362 (14%), Positives = 107/362 (29%), Gaps = 85/362 (23%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G +    V+ G  +  G  + T +            +  +  R  ++ ++        
Sbjct: 67  EDGRVAAMPVQEGDSVKAGQQVATLDT-------RTLSIQAQQARAKLEAQRQT------ 113

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              VLE    SR +++     +  S  ++        +  +   K T  R +  +R +L 
Sbjct: 114 ---VLELQAGSRPQEIAQGKARLASARAEAAYAHDDLLRLAGISKNTGGRGV--SRQELA 168

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              S  RA  +  ++    +  L                       EL   I E++    
Sbjct: 169 KAKSDDRAARAKVEEMRESLTLL-----------------------ELGARIEERERAEA 205

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            + E+  +                             L ++    E   + +PI   +V 
Sbjct: 206 RLKEMQAD-----------------------------LDLILHRIELGKLKAPIDA-VVR 235

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +     + A   +P+  +   +   ++R     K +  +K G  A+V F       +  
Sbjct: 236 ARLLEPGDMASSQKPVYTLA-LTDPKWVRVYAREKDLGRIKPGMGASV-FT--DSRPDIP 291

Query: 363 FKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
               +  I  +      S Q   L+T   YEV + + D         LR G P  V    
Sbjct: 292 VAGQVGYISSVAEFTPKSVQTEELRTSLLYEVRVFVKDPENI-----LRMGQPVTVKLQT 346

Query: 418 KN 419
             
Sbjct: 347 NE 348


>gi|299742314|ref|XP_001832385.2| hypothetical protein CC1G_07645 [Coprinopsis cinerea okayama7#130]
 gi|298405126|gb|EAU89419.2| hypothetical protein CC1G_07645 [Coprinopsis cinerea okayama7#130]
          Length = 1399

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 79/213 (37%), Gaps = 8/213 (3%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDT------EKSALDFLNNKYDVLEKAFE-SREEQLL 139
            +++ +T+    ++ +I +    I        ++   D  ++K    E+  +  RE +  
Sbjct: 543 LDELRSTEEAKARQAAIFDEERRIMQGEIQRFKRQLEDVEHDKQQASERENQLERELRQA 602

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               +  S   ++       + + ++ +   +     +  +    + +LR  L+  + + 
Sbjct: 603 RGQAESESAARRIVEERNQEMAKEIEGQRVALSRALADATEQSKNAEMLRQELAQARAEF 662

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +K L  +NA     L +++    +   E R    + +  ++      DE      +  
Sbjct: 663 EEVKQLETRNAAKVAALLEEQGNTLRKLEEARARGEDLEAQIQAARAESDEVRQALKDTS 722

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +E  R L + Q +  D + +  I E   ++  +
Sbjct: 723 EEKDR-LLKMQASEHDRIIRDHIAEADGDRAVL 754



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 76/231 (32%), Gaps = 27/231 (11%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC------HIDTEKSA----------- 116
            G ++     L   +  E +   ++ +  +   R        ++T  +A           
Sbjct: 628 EGQRVALSRALA--DATEQSKNAEMLRQELAQARAEFEEVKQLETRNAAKVAALLEEQGN 685

Query: 117 ----LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
               L+    + + LE   ++   +  +       T  +             ++    + 
Sbjct: 686 TLRKLEEARARGEDLEAQIQAARAESDEVRQALKDTSEEKDRLLKMQASEHDRIIRDHIA 745

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               +R  LE +   L+A+    ++    +K+L  +  V+ +D       + +   ELR+
Sbjct: 746 EADGDRAVLERQFFELKAVQEHTERQ---VKDLKAEIEVANSDAAGLRDELQRVEHELRD 802

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             H  + +LR   +    +  ++   L+EI+R + Q         +     
Sbjct: 803 AKH-IERLLREDLKAGRASQSDYERRLEEINRLVAQILDVAISFRNTQVKA 852


>gi|269961764|ref|ZP_06176123.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833475|gb|EEZ87575.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 376

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 70/232 (30%), Gaps = 23/232 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   +  +   +K        +  N  + E       A     Q++    +  F++ A +
Sbjct: 99  FQAEVDRLRAKVKEASQGALGLESNVQEAEAAVLKALAERDKAQREFDRYQRGFDRGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L+ + +    +   L   + + +     I                 +  ++      
Sbjct: 159 EQQLDTRRQAFKAAQAALE--VEQSRQKQAQIA----------------LESEVGGENTQ 200

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
            A  +++L   E   EQ  + +P  G +                 P+M  V   +  Y  
Sbjct: 201 VASLLAELRKAEFNLEQTVVTAPTDGYVTQLALRPGVMAVPLPLAPVMTFVHTEEKLYTA 260

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           A      +Q ++ G+ A   F          FK  + ++ P I +     + 
Sbjct: 261 A-FRQNSLQRLEPGFEAEFMFRALPGN---VFKGEVVEVLPAIGESQFQARG 308



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/147 (11%), Positives = 49/147 (33%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G + +  V+    + +G  L   + +     +D  +  +K        L  ++   ++A+
Sbjct: 72  GRVIEVPVQPNQPLQKGDVLFRIDPVPFQAEVDRLRAKVKEASQGALGLESNVQEAEAAV 131

Query: 118 DFLNNKYDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                + D  ++ F+  +       F  +   T  + F    +++      +     ++ 
Sbjct: 132 LKALAERDKAQREFDRYQRGFDRGAFTEQQLDTRRQAFKAAQAALEVEQSRQKQAQIALE 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                   + + L A L   + +L   
Sbjct: 192 SEVGGENTQVASLLAELRKAEFNLEQT 218


>gi|118357866|ref|XP_001012181.1| Viral A-type inclusion protein repeat containing protein [Tetrahymena
            thermophila]
 gi|89293948|gb|EAR91936.1| Viral A-type inclusion protein repeat containing protein [Tetrahymena
            thermophila SB210]
          Length = 4039

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 85/208 (40%), Gaps = 13/208 (6%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            +  +  + +    I T K  LD +  +    ++  +S++EQ+     + +    +     
Sbjct: 3391 EENQSLVADYEKQIKTLKDELDLITREVTAQKEQEKSQQEQINKLESQLNELTKEN-QEK 3449

Query: 157  ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS----SHQKDLTMMKNLFEKNAVS 212
            I+ + +     L  ++++     +LE+  S  +  +      +Q +LT +K   E+    
Sbjct: 3450 IAQIEQIKDEDLKIIQTLKNEIQELESSISNNKQQIETSTNQYQSELTKLKEDSEQKLEL 3509

Query: 213  QN-DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL-------KEISR 264
            ++ ++ + +  +   T ++ E   ++  ++            E AN+        K +  
Sbjct: 3510 KSAEIQKLQENIAILTKQIEEEQKQKTELINQHQSEIQNKEKELANFQNSNSIQIKNLEE 3569

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTI 292
             L Q+Q+   ++   L+ LE+ +++  +
Sbjct: 3570 QLIQSQKELDEKKQILSQLEERQKESEL 3597



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 76/201 (37%), Gaps = 5/201 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              D +   +  +      ID  K  +   + ++   +   E+R  Q+ + L K      +
Sbjct: 2683 ANDSVTKLQTELNQKINEIDHLKEQIINQDKQFKTEKMELENRFNQMKETLTKNEQKMKQ 2742

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +       + + L+ K  ++ +I        ++  LL+      Q     + N  EK+  
Sbjct: 2743 LEEKSEIELQK-LQAKKQKISTIIEEAKAKSDEIILLKNEQIKIQAQYDNISNQLEKSIN 2801

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +N+L+Q+ + + +    L E  ++ K     + E       +    L+ + ++LEQ ++
Sbjct: 2802 EKNELSQKIQNMSQQRDSLEEQRNQIKEQFNTLKETLKHTESK----LELVQKELEQAKQ 2857

Query: 272  TFADEMSKLTILEKTREQKTI 292
                  ++ +   K+     +
Sbjct: 2858 EKTSIQAQSSEKIKSLNDSMV 2878



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 72/200 (36%), Gaps = 4/200 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ---LLDFL 142
             FE        +LKK+  K  +    TE+   +  +N     +K+ E  +E+   L+   
Sbjct: 3177 RFERESQNYEQNLKKIEEKFQKQQQLTEQKYSEMQDNNEIQHKKSLEQLKEKHEKLMQQQ 3236

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK-SSLLRALLSSHQKDLTM 201
                    +      + +   L     ++  +   +  + ++  S ++           +
Sbjct: 3237 QVSFEEEKEGLQKKFNLLKEKLTNSEDQISQVEQEKQKIISQNKSKIQEYNEQQLAQEQI 3296

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +KNL E    +   + +QE ++ K   +++ +        + I+EL        A   K+
Sbjct: 3297 IKNLQESIKQNLQKMTEQEELIKKQQKQVKNSEEIIDQQKQQIDELQKSLKQTQAENEKQ 3356

Query: 262  ISRDLEQNQRTFADEMSKLT 281
            +   +    +  + + S+ T
Sbjct: 3357 MQEQINNLNQKISIKESECT 3376



 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 7/205 (3%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +D I+    S++     +  EK  +    +  ++  +        L++  GK   T  + 
Sbjct: 2922 SDQIESNNNSLQQQIFRMQEEKEQITLQTSDLNLKLEEQRKLYLNLVEENGKNKETI-RS 2980

Query: 153  FNYGISSVYRSLKMKLTRMRSI----YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
                +SS    L+ ++ +   +       +L+LEN     + L   +Q      K L E+
Sbjct: 2981 LEEKLSSEQLRLQKEVDQHEQLKSRYEQIQLNLENAKIQNKELEILNQSKENRTKELQEQ 3040

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR--DL 266
               S     +Q++   +  L+  E           I +  ++      N   E  +   L
Sbjct: 3041 YENSMRKYEKQKQNNQELKLKTVEQEKYLNQAQIQIKDFEEQLRQMQLNKRSEEDKILIL 3100

Query: 267  EQNQRTFADEMSKLTILEKTREQKT 291
             +      +E+ +L +  +   QK 
Sbjct: 3101 NKQIEELKEEIKQLILKNEVLNQKI 3125


>gi|327194646|gb|EGE61495.1| putative multidrug efflux transporter protein [Rhizobium etli
           CNPAF512]
          Length = 379

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 66/226 (29%), Gaps = 25/226 (11%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIH--EQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           A+++ D    +  V  +   L       E  ++     E   + ++   + L++ +   +
Sbjct: 96  ALARIDATDYQLAVKTAEANLAAAERGVETADLANKRAEQLFDKSVAPKSQLEQAALSHD 155

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q        +S L   +       + +   G +    +           P++  V     
Sbjct: 156 QAISQRDAALSALDQAKNQVSYTDLKAGQNGIVTAINAD-IGQVVGSGTPVVT-VAVDGE 213

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++  V    I   K G T    F     +        + ++     QQ         +
Sbjct: 214 KEVQIAVPENDIAEFKPGKTVKASFWADDKL---VLDGKVREVSGSADQQSRT------F 264

Query: 388 EVILKITDLAFSDNNIELRNGFPA--EVLFTAKNTTLAQEIIHPIT 431
            V + +       N+  +  G  A  E   +  N      +  P++
Sbjct: 265 AVRVSL------PNDPRVLLGMTATIEADISNGN----SYVSIPLS 300


>gi|320530984|ref|ZP_08032016.1| auxiliary transport protein, membrane fusion protein family protein
           [Selenomonas artemidis F0399]
 gi|320136733|gb|EFW28683.1| auxiliary transport protein, membrane fusion protein family protein
           [Selenomonas artemidis F0399]
          Length = 333

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 116/326 (35%), Gaps = 24/326 (7%)

Query: 94  DLIDLKKVSIKNLRCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +I  +  S +  R ++ T   E + +D    +   +E+   +   ++           +
Sbjct: 22  SVIAYRSYSAQTARTNLLTGTVEATRIDISAKESGTIEELLLAEGMEVHQGDIAARIRRN 81

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +    +         +    R+++ +R +     S   A   + +         +E+ A
Sbjct: 82  DLMAARLRDEAALAYAQAHLDRAVHGSRAE---DISAAAARTRAARAAADKAAADYERGA 138

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                L  +  I  ++   LRE     +  LR   +   EA L+  +  ++I    E  +
Sbjct: 139 ----QLLTEGAIAPQAFDALREEREASEANLRAAEQ--QEALLKNGSRPEDIRMAAEDVK 192

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTY 329
           R  A     L I +      T+  P  G ++  +++    Y +    L  I+ P     +
Sbjct: 193 RQQAI----LAIDDAAVGDLTVSVPADGVVLT-KNYEPGEYVRAGAALATIIDPQD--VW 245

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           ++  VT   +  ++ G  A V    Y D R +     I++I            T++    
Sbjct: 246 VKVYVTTDVLGDLRIGDAALV----YIDGRAEPVNGTIKEISDAAEYTLRQSITKDERAN 301

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
           ++    +A  + +  L+ G PA+V  
Sbjct: 302 LVFAVKVAVHNEDGALKPGMPADVDL 327



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 84/311 (27%), Gaps = 32/311 (10%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E   ++I +  SG I++  +  G ++ QG            + +   ++  +    + 
Sbjct: 42  TVEATRIDISAKESGTIEELLLAEGMEVHQGDIAARI----RRNDLMAARLRDEAALAYA 97

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                     +   D+   A  +R  +                    +   ++       
Sbjct: 98  QAHLDRAVHGSRAEDISAAAARTRAARAAADKAAADYERGAQLLTEGAIAPQAFDALREE 157

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
             +   N    E + +LL+    S  +D+ M          +  D+ +Q+ I+      +
Sbjct: 158 REASEANLRAAEQQEALLKNG--SRPEDIRM----------AAEDVKRQQAILAIDDAAV 205

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF---ADEMSKLTILEKTR 287
            +           + + Y+      A        D +          D +  L I +   
Sbjct: 206 GDLTVSVPADGVVLTKNYEPGEYVRAGAALATIIDPQDVWVKVYVTTDVLGDLRIGDAAL 265

Query: 288 EQKTILS-PIAGTIVYNQS---FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ-HV 342
                 + P+ GTI        ++      + +                KV        +
Sbjct: 266 VYIDGRAEPVNGTIKEISDAAEYTLRQSITKDER--------ANLVFAVKVAVHNEDGAL 317

Query: 343 KKGYTATVRFP 353
           K G  A V   
Sbjct: 318 KPGMPADVDLD 328


>gi|253997681|ref|YP_003049745.1| RND family efflux transporter MFP subunit [Methylotenera mobilis
           JLW8]
 gi|253984360|gb|ACT49218.1| efflux transporter, RND family, MFP subunit [Methylotenera mobilis
           JLW8]
          Length = 391

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 93/273 (34%), Gaps = 31/273 (11%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +V    ++ +  S+  ++  + +    ++      + L +              L +   
Sbjct: 80  QVDEQRMARIGASVTGRVKDIEATLGQKVSNGQVLATLNST------------ELAQSQL 127

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V    +   ++I  ++    R  + ++ +++        EA L  A      +RD     
Sbjct: 128 V---YIKAAQQIGLQTKAVNRAKLLQEADVIGSAELQRREAELSAAQADLNAARDQLIVL 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                 + KL+   +      ++S I+G ++  +        Q ++ L  I+      ++
Sbjct: 185 GMSESAIDKLSKSGQIHSYSNVVSRISGNVISRKVN-LGQVVQPAEELF-IIADLSHVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A+V  +QI  ++ G    V  P   + +     A +     +++ +           V 
Sbjct: 243 VAEVPEQQIDLIQIGEEVLVEIPALHNKQY---TAKLIYEGDVVNPETRT--------VT 291

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           ++       + N E++      +L  +  T+  
Sbjct: 292 VRCD---IENANREIKPDMLVSMLIKSSPTSKL 321



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 2/114 (1%)

Query: 47  SGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
            G I  ++  +  I +  +G +K  +   G ++  G  L T    E      +   + + 
Sbjct: 76  PGTIQVDEQRMARIGASVTGRVKDIEATLGQKVSNGQVLATLNSTELAQSQLVYIKAAQQ 135

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +         A   L     +     + RE +L       ++   ++   G+S 
Sbjct: 136 IGLQTKAVNRA-KLLQEADVIGSAELQRREAELSAAQADLNAARDQLIVLGMSE 188


>gi|303321544|ref|XP_003070766.1| hypothetical protein CPC735_038850 [Coccidioides posadasii C735
           delta SOWgp]
 gi|240110463|gb|EER28621.1| hypothetical protein CPC735_038850 [Coccidioides posadasii C735
           delta SOWgp]
          Length = 1252

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 29/226 (12%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDT-----EKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           +  D + L + S++    ++       + S L  L  +  +   A  +++E+L     + 
Sbjct: 569 KANDELTLVRSSLEQQIANLQRTMQDEKASHLQELKRREMLKSDALAAQKEELQGHFQEM 628

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL------------DLENKSSLLRALLS 193
                +     + +    L  +  ++++ +  ++            + E K    +  L 
Sbjct: 629 KKKDDQAAAEKLRAREEELYGERDQLKAEWEQQMAALNKSKDDMAAEYEGKLDTKKTELE 688

Query: 194 SHQKDLTMMK-NLFEKNA---VSQNDLNQQ-------ERIVYKSTLELRENIHEQKNMLR 242
           + Q +L   +  L  K +     Q +LN         +  +     EL E   E +    
Sbjct: 689 TKQGELDAKQAELQAKQSELDARQEELNATKSDLEAKQAELVDRQKELEEKQSEVEAKQE 748

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            IN L  E   + A  L++  R+LEQ Q     + ++L  ++   +
Sbjct: 749 EINRLKSELESKIAE-LEDKRRELEQKQGELESKQTELQAIQDELQ 793


>gi|194213485|ref|XP_001499411.2| PREDICTED: similar to Nuclear mitotic apparatus protein 1 (NuMA
           protein) (SP-H antigen) [Equus caballus]
          Length = 2115

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 73/203 (35%), Gaps = 6/203 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +   L   K   ++ L+  +     A D         ++      +++ +   +  +   
Sbjct: 604 QLEALEKEKATKLEVLQQQLQAASEARDSAQTSVTQAQREKAELSQKVEELHARVEAAHQ 663

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKN 209
           +       +    LK +L   +     R  +  +   L+  + + ++ L + K +L E+ 
Sbjct: 664 E--QCETQAQVAELKAQLRSEQQKATERERVAQEKGQLQEQVQALEESLKITKGSLEEEK 721

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL---YDEANLEFANYLKEISRDL 266
             + + L +Q+R + +   E+R  + + K   + ++E                +    ++
Sbjct: 722 RKATDTLEEQQRCISELEAEIRSLVEQHKQEQKELDEEKAGRKGLEARLQQLGEAHQAEM 781

Query: 267 EQNQRTFADEMSKLTILEKTREQ 289
           E  +R  A+ ++     E   EQ
Sbjct: 782 EALRRELAEAIASQREAESECEQ 804



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 69/205 (33%), Gaps = 8/205 (3%)

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G  L      +    +      ++     ++TE+   +    K  V    FE  ++QL  
Sbjct: 409 GDVLQLETLKQEAATLAANNTQLQARVEALETERGQREA---KLLVERGHFEEEKQQLAG 465

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            + +   + S +          S      +   +      L ++ + L + L    ++L 
Sbjct: 466 LIAELQGSLSSLSQAKEELEQAS----QAQGAQLSAQVAMLTSELTTLNSTLQQQDQELA 521

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYK-STLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            +K   +K         QQ+    +    ++ +     K   + + E   E      ++ 
Sbjct: 522 DLKQQAKKEQAQLAQTLQQQEQASQGLRHQVEQLSSSLKQKEQQLEEATKEWEATRRDHA 581

Query: 260 KEISRDLEQNQRTFADEMSKLTILE 284
           ++++   E+ + +  +  S L  LE
Sbjct: 582 QQLATAAEEQEVSLRERDSALQQLE 606



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 72/218 (33%), Gaps = 5/218 (2%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCH--IDTEKSALDFLNNKYDVLEKAFESREE 136
            +G      + +E +  I    +  +  +    ++ ++  +  L  +   L +  +  ++
Sbjct: 695 EKGQLQEQVQALEESLKITKGSLEEEKRKATDTLEEQQRCISELEAEIRSLVEQHKQEQK 754

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +L +         +++   G +       ++     +I   R        L + + +  +
Sbjct: 755 ELDEEKAGRKGLEARLQQLGEAHQAEMEALRRELAEAIASQREAESECEQLAKEVATWRE 814

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +     +   +  A+ Q  L   +    K+  EL+E   +   +  H          E A
Sbjct: 815 RYEDSQQEEAQYGAMFQEQLMTLKEECEKARQELQEAKEKVAGIEAHSELQIGRQQSELA 874

Query: 257 NYLKEISRDLEQNQRT---FADEMSKLTILEKTREQKT 291
                ++R L+Q Q            L+ L++     +
Sbjct: 875 QLHANLARALQQVQEKEVRAQKLADDLSTLQEKMAATS 912



 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 19/189 (10%), Positives = 63/189 (33%), Gaps = 10/189 (5%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             G+++      +  E     +        ++ L      +   ++ L+ K    ++A ++
Sbjct: 1512 EGAKVK-----VLEERQRFQEERQKLSAQVEQLEVFQREQTKQVEELSKKLADHDQASKA 1566

Query: 134  REEQLLDFLGK--YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            ++++L     +       ++     ++ +   L  K        L     +      +  
Sbjct: 1567 QQQKLKVVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQ 1626

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNMLRHINELY 248
                Q+ L  ++ L ++N   + +  +  R + ++ L   E  +        +R +    
Sbjct: 1627 NQELQEQLRGLEQLQKENKELRAEAERLSRELQQAGLKTKEAEQTCRHLTAQVRSLEAQV 1686

Query: 249  DEANLEFAN 257
              A+ +  +
Sbjct: 1687 AHADQQLRD 1695



 Score = 39.6 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 78/268 (29%), Gaps = 41/268 (15%)

Query: 67   IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
            +K+  +    +  +    L     ET             LR  + T +   +      + 
Sbjct: 1250 LKRLVIAESEKSQKLEERLRLLQAETASNSARAAERSSALREEVQTLREEAEKQRVASES 1309

Query: 127  LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR---------------- 170
            L +   S+ E+  +   +  +   K F    +     L+   T+                
Sbjct: 1310 LRQELASQAERAEELGQELKAWQEKFFQKEQALSALQLEHTSTQALVSELLPAKHLCQQL 1369

Query: 171  ----MRSIYLNRLDLENKSSL---LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                  +   +R +LE        LRA L   Q++L  +  L +K A  +    Q     
Sbjct: 1370 QAEQAAAEKRHREELEQSKQAAGGLRAELMRAQRELGELVPLRQKVAEQERAAQQLRAEK 1429

Query: 224  YK-------------STLELRENIHEQKNMLRH-----INELYDEANLEFANYLKEISRD 265
                              E    + E+ ++ R      +++  ++   E A    +    
Sbjct: 1430 ASYAEQLSMLKKAHGLLAEENRGLGERASLGRQFLEVELDQAREKYGQELAAVRADAETR 1489

Query: 266  LEQNQRTFADEMSKLTILEKTREQKTIL 293
            L + QR       +L ++    E   + 
Sbjct: 1490 LAEMQREAQSTARELEVVTAKYEGAKVK 1517



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 62/198 (31%), Gaps = 4/198 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               + ++  K +   LR  +   +  L  L      + +  E   +QL      Y    S
Sbjct: 1379 RHREELEQSKQAAGGLRAELMRAQRELGELVPLRQKVAEQ-ERAAQQLRAEKASYAEQLS 1437

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             +       +       L    S+    L++E   +  +               L E   
Sbjct: 1438 MLKKAH--GLLAEENRGLGERASLGRQFLEVELDQAREKYGQELAAVRADAETRLAEMQR 1495

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +Q+   + E +  K      + + E++       +L  +   +   + +E ++ +E+  
Sbjct: 1496 EAQSTARELEVVTAKYEGAKVKVLEERQRFQEERQKLSAQVE-QLEVFQREQTKQVEELS 1554

Query: 271  RTFADEMSKLTILEKTRE 288
            +  AD        ++  +
Sbjct: 1555 KKLADHDQASKAQQQKLK 1572



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/232 (9%), Positives = 71/232 (30%), Gaps = 17/232 (7%)

Query: 68  KKFQVENGSQILQGTPLLTF---EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
            K  VE G    +   L           + L   K+   +  +       + +  L ++ 
Sbjct: 447 AKLLVERGHFEEEKQQLAGLIAELQGSLSSLSQAKEELEQASQAQGAQLSAQVAMLTSEL 506

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L    + ++++L D   +     +++          S        + +      L + 
Sbjct: 507 TTLNSTLQQQDQELADLKQQAKKEQAQLAQTLQQQEQAS--------QGLRHQVEQLSSS 558

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVS---QNDLNQQERIVYKSTLEL--RENIHEQKN 239
                  L    K+    +    +   +   + +++ +ER      LE   +E   + + 
Sbjct: 559 LKQKEQQLEEATKEWEATRRDHAQQLATAAEEQEVSLRERDSALQQLEALEKEKATKLEV 618

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           + + +     EA       + +  R+  +  +   +  +++    + + +  
Sbjct: 619 LQQQLQAA-SEARDSAQTSVTQAQREKAELSQKVEELHARVEAAHQEQCETQ 669



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 72/208 (34%), Gaps = 18/208 (8%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
              L T ++       ++ ++     +     E ++ + L       ++  E  EEQ    
Sbjct: 899  DDLSTLQEKMAATSKEVARLEALVRKAGEQQETASSELLKEPPRAGDRESEWLEEQ---- 954

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                    ++     +      +  +L R+R+  +                    +    
Sbjct: 955  -QGRPFCSTQAALQAMEREAEQMGSELERLRAALME---------SQGQQQEERGQQERE 1004

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +  L ++   +Q DL  ++    +  + L+  ++EQ+     + E    A +E     +E
Sbjct: 1005 VARLTQERGRAQADLALEKAAKAELEMRLQNALNEQRVEFASLQEALAHALMEKEGRDQE 1064

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQ 289
                L + +   A + ++L  L++T E+
Sbjct: 1065 ----LAKLRGQEATQRTELRELQQTVER 1088


>gi|114564739|ref|YP_752253.1| RND family efflux transporter MFP subunit [Shewanella frigidimarina
           NCIMB 400]
 gi|114336032|gb|ABI73414.1| efflux transporter, RND family, MFP subunit [Shewanella
           frigidimarina NCIMB 400]
          Length = 319

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 56/156 (35%), Gaps = 9/156 (5%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR---HINELYDEANLEFANYLK 260
            + +++ V    + + + ++     ++     +  N       I  +             
Sbjct: 36  QVLKRHVVPGQQVQKGQPLLTIGGADIAAAQADYVNAATEWDRIKRMSQGTISASQRMQT 95

Query: 261 EISRDLEQNQRTF----ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           E++ +L++           ++++L     +  Q  +L+PI G +  +   +         
Sbjct: 96  EVNAELKRAILQSVMMSTKQIAELATSPSSIGQFQLLAPINGRVQQD-IATVGQVLTAGT 154

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           PLM++       ++ A++TP Q   V  G    VR 
Sbjct: 155 PLMQLT-DESYLWVEAELTPLQADQVNMGTDVLVRV 189


>gi|325925633|ref|ZP_08187015.1| membrane-fusion protein [Xanthomonas perforans 91-118]
 gi|325543936|gb|EGD15337.1| membrane-fusion protein [Xanthomonas perforans 91-118]
          Length = 294

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 69/192 (35%), Gaps = 19/192 (9%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEA--NLEFANYLKEISRDLEQNQRTFADEMS 278
              Y    + R  + + +  L     L  ++          ++     + + R  +D ++
Sbjct: 118 ASAYSDAGKTRATLEQARLELARQKALAADSISAARDLQAAQQAFDSAQNDARAASDRLA 177

Query: 279 KLTILEKTR--EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
           +L +  + R   +  + +PIAG +    +     +   S  LM  V      ++ A V  
Sbjct: 178 QLGVATQARSHRRYVVRAPIAGRVAELSAALGGFWNDTSASLMT-VADISQVWLTASVPE 236

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           ++I  V +G   T     Y   R   F   ++ +D ++      L      +V +     
Sbjct: 237 REIGQVFEGQPVTASLDAYPGQR---FVGHVQHLDDLLDPATRTL------KVRV----- 282

Query: 397 AFSDNNIELRNG 408
           A ++ +  L+ G
Sbjct: 283 ALNNRDGLLKPG 294



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 43/143 (30%), Gaps = 10/143 (6%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +L E  V  +  P +G +       G  +  G  L   +  E               +  
Sbjct: 76  VLPERLVRVV-PPLAGRVVALPKTLGDTVHAGDVLCVLDSAELASAYS------DAGKTR 128

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
              E++ L+    K    +    +R+ Q            ++  +  ++ +         
Sbjct: 129 ATLEQARLELARQKALAADSISAARDLQAAQQAFDSAQNDARAASDRLAQLG---VATQA 185

Query: 170 RMRSIYLNRLDLENKSSLLRALL 192
           R    Y+ R  +  + + L A L
Sbjct: 186 RSHRRYVVRAPIAGRVAELSAAL 208


>gi|317027943|ref|XP_001400318.2| subunit of the multiprotein cohesin complex [Aspergillus niger CBS
           513.88]
          Length = 1238

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 79/206 (38%), Gaps = 10/206 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +     +   +  +K L  +++++ S LDF+  + + +   +  R+E L +      ++ 
Sbjct: 740 VGLEQRLAYARDELKALERNLESKHSELDFVKRQLEDVRPKYVERQELLEELDQTIATSQ 799

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-----LLSSHQKDLTMMKN 204
             V +          K++ T  +S   N+L  E +     A     L +  Q+D  + + 
Sbjct: 800 ETVSSVEDEEEAAQKKLEFTTQKSRIENQLSFEKQRLQATADRVAGLQAQQQRDEQLTEE 859

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L  +    +N L++ E  +      LRE + +QK       E   +   E     +E+  
Sbjct: 860 LQAEQESIRNQLDEFEAELDI----LREKLEKQKEAYAQSAENLAQHRRELQKRSREVEG 915

Query: 265 DLEQNQRTFADEMSKLTILEKTREQK 290
            + +N      E+ + +       ++
Sbjct: 916 TI-KNINALEAEIQRNSSSRYALLRR 940


>gi|301770389|ref|XP_002920595.1| PREDICTED: laminin subunit beta-2-like [Ailuropoda melanoleuca]
          Length = 1797

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/254 (9%), Positives = 75/254 (29%), Gaps = 22/254 (8%)

Query: 51   LNEDNVVEIKSPFSGI---------IKKFQVEN-GSQILQGTPLLTFEDIETTDLIDLKK 100
            +       I+     I         +        G        L   +        + +K
Sbjct: 1544 IPASPEQ-IQHLAGEIAERVRSLADVDTILARTVGDVRRAEQLLQ--DARRARSRAEGEK 1600

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
               + ++  ++  + A               +  E  L     K       + + G  + 
Sbjct: 1601 QKAETVQAALEEAQRAQGAAQGAIQGAVVDTQDTERTLHQVQEKMAGAEQALSSAGERAQ 1660

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                 ++  +++    +      + +   A   + + +  +   L ++    +    ++ 
Sbjct: 1661 QLDGLLEALKLKRAGNSLAASSAEETAGSAQGRAREAEQLLQGPLGDQYQTVKALAERKA 1720

Query: 221  RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            + V  +     +   E + +L        +A  +    L+E+    E+N+R    + ++L
Sbjct: 1721 QGVLAAQARAEQLRDEARGLL--------QAAQDKLQRLQELEGTYEENERALEGKAAQL 1772

Query: 281  TILEKTREQKTILS 294
              LE  R +  + +
Sbjct: 1773 DGLE-ARMRSVLQA 1785


>gi|281338355|gb|EFB13939.1| hypothetical protein PANDA_009358 [Ailuropoda melanoleuca]
          Length = 1805

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/254 (9%), Positives = 75/254 (29%), Gaps = 22/254 (8%)

Query: 51   LNEDNVVEIKSPFSGI---------IKKFQVEN-GSQILQGTPLLTFEDIETTDLIDLKK 100
            +       I+     I         +        G        L   +        + +K
Sbjct: 1552 IPASPEQ-IQHLAGEIAERVRSLADVDTILARTVGDVRRAEQLLQ--DARRARSRAEGEK 1608

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
               + ++  ++  + A               +  E  L     K       + + G  + 
Sbjct: 1609 QKAETVQAALEEAQRAQGAAQGAIQGAVVDTQDTERTLHQVQEKMAGAEQALSSAGERAQ 1668

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                 ++  +++    +      + +   A   + + +  +   L ++    +    ++ 
Sbjct: 1669 QLDGLLEALKLKRAGNSLAASSAEETAGSAQGRAREAEQLLQGPLGDQYQTVKALAERKA 1728

Query: 221  RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            + V  +     +   E + +L        +A  +    L+E+    E+N+R    + ++L
Sbjct: 1729 QGVLAAQARAEQLRDEARGLL--------QAAQDKLQRLQELEGTYEENERALEGKAAQL 1780

Query: 281  TILEKTREQKTILS 294
              LE  R +  + +
Sbjct: 1781 DGLE-ARMRSVLQA 1793


>gi|149176856|ref|ZP_01855466.1| acriflavine resistance protein A (Precursor) [Planctomyces maris
           DSM 8797]
 gi|148844293|gb|EDL58646.1| acriflavine resistance protein A (Precursor) [Planctomyces maris
           DSM 8797]
          Length = 485

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 55/181 (30%), Gaps = 23/181 (12%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E Q+++          + +   ++    SL    +++        + + +     A L  
Sbjct: 99  EGQIVNKGDLLFIIDPRPYQAELNGARASLGQANSQLIQAKAQLEEAKAQYQQSEAQLVL 158

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
               L   ++L  KN  +Q++L+QQE    ++  +   +     +    I   +      
Sbjct: 159 STAQLNRARSLKSKNVTTQDELDQQEAAYLQAKADHEASQAGISSAKATIETAH------ 212

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                                  +K+   +   +   I +P+AG I      S  N    
Sbjct: 213 ----------------AVIEAAKAKIETAQLNLDYTRIYAPVAGRISRKNV-SEGNLING 255

Query: 315 S 315
            
Sbjct: 256 G 256



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 22/209 (10%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW-----SILLP-IEISVSS-------------SGE 49
           LKR      K +T+LS+   +GL+       +   P + +   +             +G 
Sbjct: 16  LKRPSKRQQKLLTVLSLSLFLGLVGCNQQNSAAPAPNLPVVTVAKPVTKQIVEWDAYTGR 75

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +   D V EI++  SG +K    + G  + +G  L   +       ++  + S+      
Sbjct: 76  LEAIDFV-EIRARVSGYLKTTHFDEGQIVNKGDLLFIIDPRPYQAELNGARASLGQANSQ 134

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           +   K+ L+    +Y   E        QL     L   + T     +   ++  ++    
Sbjct: 135 LIQAKAQLEEAKAQYQQSEAQLVLSTAQLNRARSLKSKNVTTQDELDQQEAAYLQAKADH 194

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 I   +  +E   +++ A  +  +
Sbjct: 195 EASQAGISSAKATIETAHAVIEAAKAKIE 223


>gi|289547881|ref|YP_003472869.1| efflux transporter RND family, MFP subunit [Thermocrinis albus DSM
           14484]
 gi|289181498|gb|ADC88742.1| efflux transporter, RND family, MFP subunit [Thermocrinis albus DSM
           14484]
          Length = 347

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 73/214 (34%), Gaps = 21/214 (9%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNM--LRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + D +Q E  V +   +L++   + +N+  +    EL  + +L     L+ +   L   +
Sbjct: 86  KIDPSQYENTVRQLEAQLQQARVQYQNLEDIVRRRELLFQKDLIAKEDLQNVKTQLRSQE 145

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  ++L        +  + +P  G I         +Y     P  ++V        
Sbjct: 146 EVIRSIKAQLDNARLELSKTVLRAPFDGYIAQRMVN-VGDYLTVQSPTFRLV-TLDPIKA 203

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
             +V  + + +VK+G   ++R          + K  +  + P+                 
Sbjct: 204 VFQVPQELLPYVKEGMEISLRVEG-----VGERKGKVFFVSPVADNN------------R 246

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
           +       +++N +L+ G    V    +  TL +
Sbjct: 247 MITVKALLANDNRQLKPGMYGVVSIPTQKLTLFR 280



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/97 (14%), Positives = 38/97 (39%), Gaps = 3/97 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS---ALDFLN 121
           G + +  V+ GS + +G  LL  +  +  + +   +  ++  R      +      + L 
Sbjct: 65  GRVLELYVDEGSYVKRGQRLLKIDPSQYENTVRQLEAQLQQARVQYQNLEDIVRRRELLF 124

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            K  + ++  ++ + QL        S  +++ N  + 
Sbjct: 125 QKDLIAKEDLQNVKTQLRSQEEVIRSIKAQLDNARLE 161


>gi|227113012|ref|ZP_03826668.1| hypothetical protein PcarbP_08623 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 342

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/291 (9%), Positives = 86/291 (29%), Gaps = 17/291 (5%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G + +  V+ G  +  G PL T +     +     + ++ + +  +   +        +
Sbjct: 51  GGRVAELNVDEGDAVQAGQPLATLDAAPYLNAQHQAQANLASAQAQLQLAQEGY----RQ 106

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++ +   +  + Q             +      +     L    T            ++
Sbjct: 107 EEIAQVRSQVVQSQAAYDYANSFYQRQQGLWDKRAISANMLDDARTSRNQALATLQAAKD 166

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K S         +           +  ++Q +LN+Q+  +   +  +      +K  +  
Sbjct: 167 KLSQFENGNRPQEIAAAQAAVAQAEAGLAQAELNKQDAELLAPSPGVILTRAAEKGSMLA 226

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                   +L    +   +   + +         S++ I    R  +     + G +  +
Sbjct: 227 SGSTVFTLSLTRPVW---VRAYVSEKDLGRVVPGSQMLIYTDGRPNQPYRGKV-GFVSPS 282

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH-VKKGYTATVRFP 353
             F+  +   +++ L            R ++        +++G   T+RF 
Sbjct: 283 AEFTPKSV--ETEDL------RTDLVYRLRIVVNDPDDGLRQGMPVTLRFD 325



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 94/297 (31%), Gaps = 36/297 (12%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            + +V E       + L       +          ++S    L++     R        +
Sbjct: 55  AELNVDEGDAVQAGQPLATLDAAPYLNAQHQAQANLASAQAQLQLAQEGYRQ--EEIAQV 112

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            ++    +A            + L++K A+S N L+       ++   L+          
Sbjct: 113 RSQVVQSQAAYDYANSFYQRQQGLWDKRAISANMLDDARTSRNQALATLQA--------- 163

Query: 242 RHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                    A  + + +      +++   Q   A   + L   E  ++   +L+P  G I
Sbjct: 164 ---------AKDKLSQFENGNRPQEIAAAQAAVAQAEAGLAQAELNKQDAELLAPSPGVI 214

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           +  ++    +       +  +   ++  ++RA V+ K +  V  G        +      
Sbjct: 215 LT-RAAEKGSMLASGSTVFTLS-LTRPVWVRAYVSEKDLGRVVPGSQ---MLIYTDGRPN 269

Query: 361 KKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           + ++  +  + P       S +  +L+T   Y + + + D         LR G P  
Sbjct: 270 QPYRGKVGFVSPSAEFTPKSVETEDLRTDLVYRLRIVVNDPDDG-----LRQGMPVT 321


>gi|197294867|ref|YP_002153408.1| efflux system transport protein [Burkholderia cenocepacia J2315]
 gi|195944346|emb|CAR56947.1| efflux system transport protein [Burkholderia cenocepacia J2315]
          Length = 325

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 60/175 (34%), Gaps = 9/175 (5%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q      ER+   +  + R  + + K   R         NL  +  ++E    +EQ 
Sbjct: 77  VIDQARYALAERLAEATLAQRRATLAQAK---REYARNLQLGNLVASEQVEESRTRVEQG 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           + + AD    L   +   ++ TI+SP+ G  + +++     Y    + ++ +V       
Sbjct: 134 EASVADAQVSLDTAKLNLQRTTIVSPVDGY-LNDRAPRVGEYVPAGRAVLSVV-DRNSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +       +++ +  G    +             +  ++ I   I  +D      
Sbjct: 192 VDGYFEETKLRGIHIGQPVDIIVMGEPH----ALRGHVQSIVAAIEDRDRTQGAN 242



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 41/118 (34%), Gaps = 6/118 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++    SG+I   QV +  ++ +G  L   +         L + ++   R  + 
Sbjct: 43  VRADVIQVAPDVSGLITSVQVADNQEVKRGQVLFVIDQARYALAERLAEATLAQRRATLA 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             K            L+       EQ+ +   +     + V +  +S     L ++ T
Sbjct: 103 QAKREYAR------NLQLGNLVASEQVEESRTRVEQGEASVADAQVSLDTAKLNLQRT 154


>gi|144898481|emb|CAM75345.1| Membrane-fusion protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 420

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 8/148 (5%)

Query: 14  PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           P    R     +    G++    L P+  SV +  E     + V I++P  G+I +  V 
Sbjct: 149 PKPRGRKGWAMVAA--GVLV--ALFPVTSSVLAPAE-SVAAHPVLIRAPLEGVIGRMAVR 203

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKA 130
               + +G  L   +    T  +D+ + S+            A+ F      +  +L   
Sbjct: 204 PNDAVTEGQVLFELDSTTLTGRLDVARQSLATAEAEYRQTAQAMVFDAKAKTQAAILAGK 263

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGIS 158
            E +  ++     +      K    GI+
Sbjct: 264 AEEKAAEVRLLESQLARIQVKAPKAGIA 291



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 47/162 (29%), Gaps = 17/162 (10%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           +         E       +   +  +             ++ +++ +LE    +  + +P
Sbjct: 227 DVARQSLATAEAEYRQTAQAMVFDAKAKTQAAILAGKAEEKAAEVRLLESQLARIQVKAP 286

Query: 296 IAGTIVYNQSFS-SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT------- 347
            AG  V++             + +M  V     T + A V    +  V+ G         
Sbjct: 287 KAGIAVFDDVADWIGRPVILGEKVMA-VADETDTEVEAWVAVADVGEVRPGGPLTLFLNT 345

Query: 348 -------ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  A VR   Y          I  +I   +++ ++  +
Sbjct: 346 NPLSPVKARVRSVAYEAAARPDAS-IAHRIRATLAEAEDKPR 386


>gi|50512294|ref|NP_694514.2| myosin, heavy polypeptide 2, fast muscle specific [Danio rerio]
 gi|48734671|gb|AAH71279.1| Myosin, heavy polypeptide 2, fast muscle specific [Danio rerio]
 gi|122890804|emb|CAM14144.1| myosin, heavy polypeptide 2, fast muscle specific [Danio rerio]
          Length = 1935

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L ++  KY    +++   G  
Sbjct: 1416 LEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQKYEEGQAEL--EGAQ 1473

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   L+    + Q++++ +     +   S ++L +
Sbjct: 1474 KEARSLSTELFKMKNSYEETLD---QLETLKRENKNLQQEISDLTEQLGETGKSIHELEK 1530

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      EI R L +          
Sbjct: 1531 AKKTVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKLAEKDEEMEQIKR 1590

Query: 278  --SKLTILEKTREQKTILS 294
               ++T   ++     + S
Sbjct: 1591 NSQRVTEAMQSTLDSEVRS 1609



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 75/229 (32%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1208 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKAKANLEKMCRTVEDQLSEIKSKN 1265

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++                  R L+ K   +  +   +     +   L+  +    
Sbjct: 1266 DENLRQINDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEV 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1326 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1386 EELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLMI 1432



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K      L   I+ E+S    L  K   L+   
Sbjct: 1058 EGDLKLAQESIMDLENDKQQSEEKIKKKDFETAQLLSKIEDEQSLGAQLQKKIKELQARI 1117

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1118 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1171

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1172 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1226

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +       + +   +LE+  RT  D++S++        ++ 
Sbjct: 1227 KMEIDDLSSNMEAVAKAKANLEKMCRTVEDQLSEIKSKNDENLRQI 1272


>gi|322616378|gb|EFY13287.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619628|gb|EFY16503.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622676|gb|EFY19521.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322628589|gb|EFY25376.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631525|gb|EFY28281.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637052|gb|EFY33755.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641749|gb|EFY38385.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644458|gb|EFY40998.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649572|gb|EFY46003.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654126|gb|EFY50449.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658041|gb|EFY54308.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663515|gb|EFY59717.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670251|gb|EFY66391.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671487|gb|EFY67609.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676843|gb|EFY72910.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682768|gb|EFY78787.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686447|gb|EFY82429.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323196099|gb|EFZ81262.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323196755|gb|EFZ81899.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202965|gb|EFZ87999.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209006|gb|EFZ93943.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211911|gb|EFZ96739.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215157|gb|EFZ99902.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222360|gb|EGA06738.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226881|gb|EGA11064.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229835|gb|EGA13958.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233060|gb|EGA17156.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240795|gb|EGA24837.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323243112|gb|EGA27132.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248654|gb|EGA32582.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323251655|gb|EGA35522.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323257357|gb|EGA41055.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323261946|gb|EGA45512.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323267961|gb|EGA51440.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271972|gb|EGA55387.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 372

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  +      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKVNDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 66/174 (37%), Gaps = 17/174 (9%)

Query: 18  KRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+  W +L                +E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMAGWRMLNAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G  + +   L   +  +  + I   + ++  L    + +++A +    +
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNA--ERQQAAAELKLAR 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +   ++ + +        +T   V    I ++   +K     + +   N
Sbjct: 128 VTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTN 181


>gi|308450449|ref|XP_003088303.1| hypothetical protein CRE_18366 [Caenorhabditis remanei]
 gi|308248117|gb|EFO92069.1| hypothetical protein CRE_18366 [Caenorhabditis remanei]
          Length = 397

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 62/167 (37%), Gaps = 7/167 (4%)

Query: 214 NDLNQQERIVYKST-LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           ++  + E    K+   E +  + +     + I +L +   +      K ++      Q  
Sbjct: 119 SESIRAELATAKANYAEAKAVLADASINNQRIQQLKNTGAISQQEATKYLTSQ-STAQAR 177

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                +++   +    Q  +++P  G I   ++ +  + AQ  Q L +++        RA
Sbjct: 178 LDAAKAQIDSNQLRLTQTQVIAPDHGVI-SARTATVGSLAQTGQELFRLI-RDNRLEWRA 235

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           +VT   +  +KKG TA +        R       +  I P+I  Q  
Sbjct: 236 EVTSTDLYKLKKGMTAHI--TSPDPSRS-AVSGSVRMIAPVIDPQTR 279



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 59/160 (36%), Gaps = 6/160 (3%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +++G I     VV         I K  V  G  + +G  L           +   K +  
Sbjct: 75  TANGNIAAWQEVVIGSELSGQRITKVNVNVGDSVQRGQVLAEINSESIRAELATAKANYA 134

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +  +    +     N +   L+      +++   +L    +  +++      +   S 
Sbjct: 135 EAKAVL----ADASINNQRIQQLKNTGAISQQEATKYLTSQSTAQARLDAA--KAQIDSN 188

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           +++LT+ + I  +   +  +++ + +L  + Q+   ++++
Sbjct: 189 QLRLTQTQVIAPDHGVISARTATVGSLAQTGQELFRLIRD 228


>gi|241760854|ref|ZP_04758943.1| efflux transporter, RND family, MFP subunit [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
 gi|241374473|gb|EER63934.1| efflux transporter, RND family, MFP subunit [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
          Length = 373

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 88/280 (31%), Gaps = 15/280 (5%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E++   +G++       G+ + +G PL            D+ K  +     H + ++   
Sbjct: 47  EVRPQVNGVVLARYFNEGTDVKKGQPLFLINPAPYQATYDVNKAQL----AHAEAQEKTA 102

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                +Y  L  A     +   D L    +  + +     +    ++ +  TR+ +    
Sbjct: 103 AAKLERYKALAPAQAISRQDYDDALATDRAAKADIAQAKANIELSAVNLGYTRVTAPITG 162

Query: 178 RLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           R+   L    +L+ +  SS+   +T +  ++    +   D  +  R +   TL+   N  
Sbjct: 163 RIGRVLTTVGALVTSGQSSNMAIVTRLDPIYVDVNLPTVDFLRLRRELKAGTLKRNGNDA 222

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           E   +L   +    +  L  +    +        +  F +    L        +      
Sbjct: 223 EVSLILDDNSTYNQKGRLALSEVSADTQTSTIVVRAVFPNPEHLLLPGMFVYGRIE---- 278

Query: 296 IAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRAK 333
             G           +  +     P++ +V       I A+
Sbjct: 279 -EGIDPNALLVPQESVFRNNHGDPMLYVVNKDD--VIEAR 315


>gi|239621103|ref|ZP_04664134.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|239516025|gb|EEQ55892.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
          Length = 1203

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 75/225 (33%), Gaps = 26/225 (11%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E    ++  K  + + R  +D  ++ L     K +      +    Q+   L       +
Sbjct: 376 EARTQLESGKTQLTSARKQLDAAQTELTANRTKIEQGITQIDQGMAQIDQMLPMIQQANN 435

Query: 151 KVFN------------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS-HQK 197
            +                I  +   L + L  + SI   R  L  K + L+    S  Q+
Sbjct: 436 LLAQLDPNIDLNSPTWQAIKQLLARLGITLPEVPSISELRQQLAAKQTELQTQRDSLAQQ 495

Query: 198 DLTMMKNLFEKNAVSQNDLNQQ-------ERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + + L E  A +Q+ L+QQ       E+       +L     E +     +     +
Sbjct: 496 KADLQRTLNETIAPAQSTLDQQNAQLTAKEQEAAAGEAQLNTKSAELEANAATLETQSAQ 555

Query: 251 ANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              + A        L+E  R L++ ++  AD  +KL   +   + 
Sbjct: 556 LEAQAAQLASGKRQLEEGERQLKEGEQQLADGKAKLDDAQSALDA 600


>gi|189426468|ref|YP_001953645.1| secretion protein HlyD [Geobacter lovleyi SZ]
 gi|189422727|gb|ACD97125.1| secretion protein HlyD family protein [Geobacter lovleyi SZ]
          Length = 357

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 43/140 (30%), Gaps = 2/140 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK+  V  G  +  G  +   +               +  +  + T +S L    ++ 
Sbjct: 58  GRIKEILVREGEFVTAGQVVARMDTDTLEAQFREAVAQRQQAQSSVVTAQSQLAQRESEK 117

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                    RE  L     + H+  S V     +   +       ++RS       +  +
Sbjct: 118 SAALALLAQREADL--DKARKHAKRSSVLVGNGAIAQQDADDDRAQLRSAEAVVNAVRAQ 175

Query: 185 SSLLRALLSSHQKDLTMMKN 204
            +   A + + +  +   ++
Sbjct: 176 IAASEATIITARSQIAGAQS 195



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/290 (9%), Positives = 76/290 (26%), Gaps = 12/290 (4%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           K    RE + +          +              +   + + +        E++ S  
Sbjct: 61  KEILVREGEFVTAGQVVARMDTDTLEAQFREAVAQRQQAQSSVVTAQSQLAQRESEKSAA 120

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            ALL+  + DL   +   ++++V   +    ++       +LR        +   I    
Sbjct: 121 LALLAQREADLDKARKHAKRSSVLVGNGAIAQQDADDDRAQLRSAEAVVNAVRAQIAASE 180

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                            +   Q       +    ++       + +P  G + Y +    
Sbjct: 181 ATIIT--------ARSQIAGAQSAVGAAKANTERIQADIRDSALKAPRDGRVQY-KVAQL 231

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                    ++ +V  S   Y+   +       V  G    +              + I 
Sbjct: 232 GEVVGAGGRVLSLVDLSD-VYMTFFLPTAAAGKVALGSEVRLVLDAAPQYVIPAKASFIA 290

Query: 369 KIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +     +  +  + + +  + +  +I       +  +++ G P      
Sbjct: 291 DVAQFTPKTVETTSEREKLMFRIRAQIPVELLKKHITQVKTGLPGVAWVR 340


>gi|303328167|ref|ZP_07358606.1| multidrug resistance protein MdtA (Multidrug transporter mdtA)
           [Desulfovibrio sp. 3_1_syn3]
 gi|302861993|gb|EFL84928.1| multidrug resistance protein MdtA (Multidrug transporter mdtA)
           [Desulfovibrio sp. 3_1_syn3]
          Length = 400

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 54/154 (35%), Gaps = 4/154 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             G ++   +V  +KS   G + +   + G ++  G  L   +       +D  + ++  
Sbjct: 65  GLGTVIPSSDV-LVKSRVDGQLVRLHFQEGQRVKAGDLLAEIDPRPFQAALDEAQGNLAK 123

Query: 106 LRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            +  +D  +  L     L     +  + +E++   +  + G   +  + V +  +   Y 
Sbjct: 124 DQAQLDNARRDLARYAKLAKGDFIAAQQYETQRALVRQYEGTVEADKAAVDSARLQLDYS 183

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +   +     +       + KSS    L+   +
Sbjct: 184 RITAPVGGRLGLRNVDEGNQIKSSDSDGLVRITE 217


>gi|107100042|ref|ZP_01363960.1| hypothetical protein PaerPA_01001063 [Pseudomonas aeruginosa PACS2]
          Length = 376

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 67/210 (31%), Gaps = 27/210 (12%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L Q E  V ++TL   E                  +     +    ++    +   T A+
Sbjct: 97  LIQLESDVEEATLRTAEADLGLARAEYQRGRELIGSKAISKSEFDRLAAQWAKTSATVAE 156

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKV 334
             + L        +K +L+P AGTI   +     +Y     P+  +         +   +
Sbjct: 157 LKAALA-------KKRVLAPFAGTI-GIRQVDVGDYVSPGTPIATL--QDLSTLLLDFHL 206

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             +    + +G    VR   Y       F A I  I+P +  +  NLQ            
Sbjct: 207 PEQDFPLLSRGQLVKVRVAAYPAQ---VFDAEIAAINPKVDNETRNLQV----------- 252

Query: 395 DLAFSDNNIELRNGFPA--EVLFTAKNTTL 422
             A  + + +L  G  A  EV+   +   +
Sbjct: 253 RAALENPDGKLLPGMFANLEVMLPGEEQRV 282


>gi|226310986|ref|YP_002770880.1| hypothetical protein BBR47_13990 [Brevibacillus brevis NBRC 100599]
 gi|226093934|dbj|BAH42376.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 219

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 5/151 (3%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               +     +     E   + SPI GT++  Q+          Q +  ++      YI 
Sbjct: 70  QIVGQQDTSNVATTMLENSVLRSPITGTVIKTQA-KEGEIVSTGQSVALVI-DESKLYIS 127

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-PIISQQDNNLQTQEYYEVI 390
           A +   +I+ +K G         Y   +       I K      S       +  + +V 
Sbjct: 128 ANLEETEIERLKLGQKVDFTIDAYPGKKLGGHLMEIGKATNSTFSLMPAANTSGNFTKVT 187

Query: 391 LKIT-DLAFSD-NNIELRNGFPAEVLFTAKN 419
            +I   +A  D   ++L  G  AE+    K 
Sbjct: 188 QRIPIKIAIDDTAGLDLVAGLNAEIKVHVKE 218


>gi|122890803|emb|CAM14143.1| myosin heavy chain 4 [Danio rerio]
          Length = 1935

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L ++  KY    +++   G  
Sbjct: 1416 LEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQKYEEGQAEL--EGAQ 1473

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   L+    + Q++++ +     +   S ++L +
Sbjct: 1474 KEARSLSTELFKMKNSYEETLD---QLETLKRENKNLQQEISDLTEQIGETGKSIHELEK 1530

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      EI R L +          
Sbjct: 1531 AKKTVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKLAEKDEEIEQIKR 1590

Query: 278  --SKLTILEKTREQKTILS 294
               ++T   ++     + S
Sbjct: 1591 NSQRVTEAMQSTLDSEVRS 1609



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 75/229 (32%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1208 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKAKANLEKMCRTVEDQLSEIKSKN 1265

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++                  R L+ K   +  +   +     +   L+  +    
Sbjct: 1266 DENLRQINDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEV 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1326 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1386 EELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLMI 1432



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K      L   I+ E+S    L  K   L+   
Sbjct: 1058 EGDLKLAQESIMDLENDKQQSEEKIKKKDFETAQLLSKIEDEQSLGAQLQKKIKELQARI 1117

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1118 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1171

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1172 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1226

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +       + +   +LE+  RT  D++S++        ++ 
Sbjct: 1227 KMEIDDLSSNMEAVAKAKANLEKMCRTVEDQLSEIKSKNDENLRQI 1272


>gi|115373037|ref|ZP_01460340.1| secretion protein HlyD, putative [Stigmatella aurantiaca DW4/3-1]
 gi|310821877|ref|YP_003954235.1| secretion family protein HlyD [Stigmatella aurantiaca DW4/3-1]
 gi|115369949|gb|EAU68881.1| secretion protein HlyD, putative [Stigmatella aurantiaca DW4/3-1]
 gi|309394949|gb|ADO72408.1| Secretion protein HlyD [Stigmatella aurantiaca DW4/3-1]
          Length = 421

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 58/193 (30%), Gaps = 1/193 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PI  +++ +G++     V    S    ++ +  V++G  + +G  L   +       + 
Sbjct: 42  GPITRTITGAGKVQAATTVKISSSLSGDLV-ELLVKDGDPVKKGQVLGRIDRRRFEATVK 100

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
               S    +  +   +      + +Y  ++   E       +      +  +       
Sbjct: 101 QALASQSASKAEVQVSEVEAQRTHAEYARVKSLVEKGLASGAELEQAQAARDTADAQQAA 160

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +    +    +    +  L +  L +        LS    +     +L +   +    LN
Sbjct: 161 ARQRLAQASAVYEEAASNLAQTTLVSPIDGNVIELSREVGERVRGSDLSDDIVMIIAALN 220

Query: 218 QQERIVYKSTLEL 230
             E  +     E+
Sbjct: 221 AMEVKIEVGEHEV 233



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 16/218 (7%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE-LYDEANLEFANYLKEISR 264
            ++   SQ+     +  V  S +E +    E   +   + + L   A LE A   ++ + 
Sbjct: 99  VKQALASQS---ASKAEVQVSEVEAQRTHAEYARVKSLVEKGLASGAELEQAQAARDTAD 155

Query: 265 DLEQNQRTFADEMSKL-TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMK 320
             +   R    + S +         Q T++SPI G ++   S       +    S  ++ 
Sbjct: 156 AQQAAARQRLAQASAVYEEAASNLAQTTLVSPIDGNVIEL-SREVGERVRGSDLSDDIVM 214

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           I+       ++ +V   ++ H+K G  A V          + F+  + +I      ++  
Sbjct: 215 IIAALNAMEVKIEVGEHEVVHLKPGQPAEVALDALD---GESFQGSVVEIAQKALIKNEG 271

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            +     EV      +A       +  G  AEV   A+
Sbjct: 272 TEA----EVTTFPITVALDARPAGVLPGMSAEVRIAAE 305


>gi|157869463|ref|XP_001683283.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68224167|emb|CAJ04669.1| hypothetical protein LMJF_22_1320 [Leishmania major strain Friedlin]
          Length = 2046

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 73/227 (32%), Gaps = 26/227 (11%)

Query: 91   ETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREE-QLLDFLGKYHST 148
            +       +   + +LR  + + E+ A D    + D   +  + RE+ +  +   +    
Sbjct: 1278 DVEAQQSDRDAEVADLREQLREAEEHARDVEAQQSDRDAEVADLREQLREAEEHARDVEA 1337

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT-------- 200
                 +  ++ +   L+      R +   + D + +   ++ LLSS  ++          
Sbjct: 1338 QQSDRDAEVADLREQLREAEEHARDVEAQQSDRDAEIDRVKELLSSSMREAASSGEMLGA 1397

Query: 201  ----------MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                       M+ L E+ AV+Q      +  V     +LRE     +++    ++   E
Sbjct: 1398 LEEQREEAAREMRGLREQLAVAQVRREALDAEVADLREQLREAEEHARDVEAQQSDRDAE 1457

Query: 251  AN------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                     E     +++           AD   +L   E+      
Sbjct: 1458 VADLREQLREAEERARDVEAQQSDRDAEVADLREQLREAEEHARDVE 1504



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 72/223 (32%), Gaps = 19/223 (8%)

Query: 91   ETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREE-QLLDFLGKYHST 148
            +       +   + +LR  + + E+ A D    + D   +  + RE+ +  +   +    
Sbjct: 1250 DVEAQQSDRDAEVADLREQLREAEERARDVEAQQSDRDAEVADLREQLREAEEHARDVEA 1309

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL---SSHQKDLTMMKNL 205
                 +  ++ +   L+      R +   + D + + + LR  L     H +D+   ++ 
Sbjct: 1310 QQSDRDAEVADLREQLREAEEHARDVEAQQSDRDAEVADLREQLREAEEHARDVEAQQSD 1369

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELREN--------------IHEQKNMLRHINELYDEA 251
             +       +L         S+ E+                 + EQ  + +   E  D  
Sbjct: 1370 RDAEIDRVKELLSSSMREAASSGEMLGALEEQREEAAREMRGLREQLAVAQVRREALDAE 1429

Query: 252  NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              +    L+E        +   +D  +++  L +   +    +
Sbjct: 1430 VADLREQLREAEEHARDVEAQQSDRDAEVADLREQLREAEERA 1472



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 67/227 (29%), Gaps = 24/227 (10%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D+E         ++   ++   D     +D    +YD        R  Q           
Sbjct: 1026 DVEHVAFEMGSLLATVRVQHDADATIMEMDRRLQEYDYPLTMELYRLRQGPKRGADAALA 1085

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT-------- 200
                 +  I+ +   L+    R R +   + D + +   ++ LLSS  ++          
Sbjct: 1086 TVAHRDTEIADLREQLREAEERARDVEAQQSDRDAEIDRVKELLSSSMREAASSGEMLGA 1145

Query: 201  ----------MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                       M+ L E+ AV+Q      +  V     +LRE     +++    ++   E
Sbjct: 1146 LEEQREEAAREMRGLREQLAVAQVRREALDAEVADLREQLREAEEHARDVEAQQSDRDAE 1205

Query: 251  AN------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                     E     +++           AD   +L   E+      
Sbjct: 1206 VADLREQLREAEERARDVEAQQSDRDAEVADLREQLREAEEHARDVE 1252



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 69/198 (34%), Gaps = 10/198 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREE-QLLDFLGKYHST 148
            +       +   + +LR  + + E+ A D    + D   +  + RE+ +  +   +    
Sbjct: 1558 DVEAQQSDRDAEVADLREQLREAEERARDVEAQQSDRDAEVADLREQLREAEERARDVEA 1617

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL---SSHQKDLTMMKNL 205
                 +  ++ +   L+      R +   + D + + + LR  L     H +D+   ++ 
Sbjct: 1618 QQSDRDAEVADLREQLREAEEHARDVEAQQSDRDAEVADLREQLREAEEHARDVEAQQSD 1677

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENI----HEQKNMLRHINELYDEANLEFANYLKE 261
             +       +L         S+ E+   +     E    +R + E    A +       E
Sbjct: 1678 RDAEIDRVKELLSSSMREAASSGEMLGALEEQREEAAREMRGLREQLAVAQVRQEALDAE 1737

Query: 262  ISRDLEQNQRTFADEMSK 279
            +  DL +  R    ++++
Sbjct: 1738 V-ADLREQLREAEADVAR 1754



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 64/196 (32%), Gaps = 20/196 (10%)

Query: 91   ETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREE-QLLDFLGKYHST 148
            +       +   + +LR  + + E+ A D    + D   +  + RE+ +  +   +    
Sbjct: 1586 DVEAQQSDRDAEVADLREQLREAEERARDVEAQQSDRDAEVADLREQLREAEEHARDVEA 1645

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT-------- 200
                 +  ++ +   L+      R +   + D + +   ++ LLSS  ++          
Sbjct: 1646 QQSDRDAEVADLREQLREAEEHARDVEAQQSDRDAEIDRVKELLSSSMREAASSGEMLGA 1705

Query: 201  ----------MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                       M+ L E+ AV+Q      +  V     +LRE   +       I     E
Sbjct: 1706 LEEQREEAAREMRGLREQLAVAQVRQEALDAEVADLREQLREAEADVARGEGVILLTTSE 1765

Query: 251  ANLEFANYLKEISRDL 266
                   + + +   L
Sbjct: 1766 ELQRADLWRRMLEEAL 1781


>gi|66472732|ref|NP_001018321.1| myosin heavy chain 4 [Danio rerio]
 gi|63021932|gb|AAY26547.1| fast myosin heavy chain 4 [Danio rerio]
          Length = 1935

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L ++  KY    +++   G  
Sbjct: 1416 LEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQKYEEGQAEL--EGAQ 1473

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   L+    + Q++++ +     +   S ++L +
Sbjct: 1474 KEARSLSTELFKMKNSYEETLD---QLETLKRENKNLQQEISDLTEQIGETGKSIHELEK 1530

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      EI R L +          
Sbjct: 1531 AKKTVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKLAEKDEEIEQIKR 1590

Query: 278  --SKLTILEKTREQKTILS 294
               ++T   ++     + S
Sbjct: 1591 NSQRVTEAMQSTLDSEVRS 1609



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 75/229 (32%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1208 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKAKANLEKMCRTVEDQLSEIKSKN 1265

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++                  R L+ K   +  +   +     +   L+  +    
Sbjct: 1266 DENLRQINDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEV 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1326 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1386 EELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLMI 1432



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 74/226 (32%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K      L   I+ E+S    L  K   L+   
Sbjct: 1058 EGDLKLAQESIMDLENDKQQSEEKIKKKDFETAQLLSKIEDEQSLGAQLQKKIKELQARI 1117

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1118 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1171

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1172 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1226

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +       + +   +LE+  RT  D++S++        ++ 
Sbjct: 1227 KMEIDDLSSNMEAVAKAKANLEKMCRTVEDQLSEIKSKNDENLRQI 1272


>gi|30248193|ref|NP_840263.1| HlyD family secretion protein [Nitrosomonas europaea ATCC 19718]
 gi|30180078|emb|CAD84080.1| HlyD family secretion protein [Nitrosomonas europaea ATCC 19718]
          Length = 399

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 68/193 (35%), Gaps = 13/193 (6%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             VEI+S  +GIIKK     G  I +G  L   + +    +    +  +   R  +D   
Sbjct: 71  RPVEIRSQVNGIIKKIFFTEGRNIKKGDKLYLIDPVPFNAVYKNSRAMVTQARARLDQAN 130

Query: 115 SALDFLN---NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             L  +     +  V +K  +    ++        +  + +           +   +   
Sbjct: 131 KDLARVQPLLKQKAVSKKEVDDAVVEVRSARAALEAAQNVMIKAKFDLDNTLITAPVEGR 190

Query: 172 --RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
             RS +     +E +++LL          +  +  ++    + ++ L +  R + +  LE
Sbjct: 191 INRSQFYEGRLVEAQTNLLTT--------IDQLDPMYVNVNIPESYLLRLRRELSEHKLE 242

Query: 230 LRENIHEQKNMLR 242
             E+I +   ++ 
Sbjct: 243 RPESIFQLSGVMT 255



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/107 (9%), Positives = 34/107 (31%), Gaps = 2/107 (1%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           + R  + +    L  +  L  +  +     + +   ++   +       + +   +   +
Sbjct: 121 QARARLDQANKDLARVQPLLKQKAVS-KKEVDDAVVEVRSARAALEAAQNVMIKAKFDLD 179

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              I +P+ G I  +Q +      +    L+  +      Y+   + 
Sbjct: 180 NTLITAPVEGRINRSQFY-EGRLVEAQTNLLTTIDQLDPMYVNVNIP 225


>gi|9910570|ref|NP_064322.1| polyamine-modulated factor 1-binding protein 1 [Mus musculus]
 gi|81869923|sp|Q9WVQ0|PMFBP_MOUSE RecName: Full=Polyamine-modulated factor 1-binding protein 1;
           Short=PMF-1-binding protein; AltName: Full=Sperm
           tail-associated protein
 gi|5525095|dbj|BAA82514.1| sperm tail associated protein [Mus musculus]
 gi|148679473|gb|EDL11420.1| polyamine modulated factor 1 binding protein 1 [Mus musculus]
 gi|187950983|gb|AAI38247.1| Polyamine modulated factor 1 binding protein 1 [Mus musculus]
 gi|187953859|gb|AAI38246.1| Polyamine modulated factor 1 binding protein 1 [Mus musculus]
          Length = 1022

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 78/212 (36%), Gaps = 7/212 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             +           K+  + LR  I   K +L+    +  V ++     +E+        
Sbjct: 454 ELDTSLQEARQSTSKIDCEALRAEIQKLKDSLEEAREQLKVSDQNLTQSKEEAHLSASSL 513

Query: 146 HSTCSKVFNYGISSVYRS--LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMM 202
                K+ N  +    +   +K   +++  +      +E +    R  L     +L    
Sbjct: 514 EDAHRKIENCLLQDKQKEEVIKDLQSQLHKLQKESSKIEEERKHNRQRLQELSSELSEGQ 573

Query: 203 KNLF---EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           + L    ++ ++ Q  L++ E+ + +     + +  +Q+ +   I +L +E  LE    L
Sbjct: 574 RRLSNAEKEKSLLQKTLDEDEKKIDELFHSTQVSEQKQRELTNSIRKLEEEL-LEIKGLL 632

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +E    L++++        ++  L +  ++K 
Sbjct: 633 EEKREQLKKSKEQEKALEEEIEALRQEAKRKE 664



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 68/200 (34%), Gaps = 9/200 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    I+   +  K     I   +S L  L  +   +E+  +   ++L +   +      
Sbjct: 515 DAHRKIENCLLQDKQKEEVIKDLQSQLHKLQKESSKIEEERKHNRQRLQELSSELSEGQR 574

Query: 151 KVFNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
           ++ N       + ++L     ++  ++ +    E K   L   +   +++L  +K L E+
Sbjct: 575 RLSNAEKEKSLLQKTLDEDEKKIDELFHSTQVSEQKQRELTNSIRKLEEELLEIKGLLEE 634

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    +Q +   +    L E I   +   +   ++  E   +     + +  +L  
Sbjct: 635 K-------REQLKKSKEQEKALEEEIEALRQEAKRKEKMAKEHLRKLDEEKENLQAELTS 687

Query: 269 NQRTFADEMSKLTILEKTRE 288
                   ++K    +K  +
Sbjct: 688 RSSHLDSSLNKYNSSQKVIQ 707



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 80/213 (37%), Gaps = 15/213 (7%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E  + + +   ++   +       S+L+  + K +      + +EE + D   + H    
Sbjct: 487 EAREQLKVSDQNLTQSKEEAHLSASSLEDAHRKIENCLLQDKQKEEVIKDLQSQLHKLQK 546

Query: 151 KV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM------ 202
           +            + L+   + +        + E + SLL+  L   +K +  +      
Sbjct: 547 ESSKIEEERKHNRQRLQELSSELSEGQRRLSNAEKEKSLLQKTLDEDEKKIDELFHSTQV 606

Query: 203 -----KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                + L       + +L + + ++ +   +L+++  ++K +   I  L  EA  +   
Sbjct: 607 SEQKQRELTNSIRKLEEELLEIKGLLEEKREQLKKSKEQEKALEEEIEALRQEAKRK-EK 665

Query: 258 YLKEISRDLEQNQRTF-ADEMSKLTILEKTREQ 289
             KE  R L++ +    A+  S+ + L+ +  +
Sbjct: 666 MAKEHLRKLDEEKENLQAELTSRSSHLDSSLNK 698


>gi|15599570|ref|NP_253064.1| Resistance-Nodulation-Cell Division (RND) efflux membrane fusion
           protein precursor [Pseudomonas aeruginosa PAO1]
 gi|254238963|ref|ZP_04932286.1| hypothetical protein PACG_05133 [Pseudomonas aeruginosa C3719]
 gi|9950603|gb|AAG07762.1|AE004853_5 probable Resistance-Nodulation-Cell Division (RND) efflux membrane
           fusion protein precursor [Pseudomonas aeruginosa PAO1]
 gi|126170894|gb|EAZ56405.1| hypothetical protein PACG_05133 [Pseudomonas aeruginosa C3719]
          Length = 376

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 67/210 (31%), Gaps = 27/210 (12%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L Q E  V ++TL   E                  +     +    ++    +   T A+
Sbjct: 97  LIQLESDVEEATLRTAEADLGLARAEYQRGRELIGSKAISKSEFDRLAAQWAKTSATVAE 156

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKV 334
             + L        +K +L+P AGTI   +     +Y     P+  +         +   +
Sbjct: 157 LKAALA-------KKRVLAPFAGTI-GIRQVDVGDYVSPGTPIATL--QDLSTLLLDFHL 206

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             +    + +G    VR   Y       F A I  I+P +  +  NLQ            
Sbjct: 207 PEQDFPLLSRGQLVKVRVAAYPAQ---VFDAEIAAINPKVDNETRNLQV----------- 252

Query: 395 DLAFSDNNIELRNGFPA--EVLFTAKNTTL 422
             A  + + +L  G  A  EV+   +   +
Sbjct: 253 RAALENPDGKLLPGMFANLEVMLPGEEQRV 282


>gi|328543922|ref|YP_004304031.1| Membrane fusion protein family auxiliary transport protein
           [polymorphum gilvum SL003B-26A1]
 gi|326413666|gb|ADZ70729.1| Membrane fusion protein family auxiliary transport protein
           [Polymorphum gilvum SL003B-26A1]
          Length = 329

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/310 (11%), Positives = 92/310 (29%), Gaps = 39/310 (12%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            T  S    +  +   +      R  ++L   G +      +       +  SL     R
Sbjct: 34  QTIASGNGRIEAETIHVATRTGGRVVEVLVGEGDFVEAGQVLARLDTEELEASLAGAEAR 93

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           + +       +  + +   + L    + L     L E+  +S+ +++Q++     +   L
Sbjct: 94  VAAAKDTAASVTAQIAQRESELRYADQALQRATALLERGHISRQEVDQRQTARDTAEAAL 153

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                +  N  R ++    E  L     + E                             
Sbjct: 154 AAVRAQLANAERSVDAARAEV-LRIGTVIAEA---------------------------- 184

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +PIAG + Y +             ++ ++  +   Y+   +    +  V  G  A +
Sbjct: 185 ELKAPIAGRVQY-RLAEPGEVLGAGGRVVTLLNLAD-VYMTIFLPTASVGRVFVGAEARI 242

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDLAFSDNNIEL 405
                         A++  + P        ++T+       + V +++      ++  ++
Sbjct: 243 VLDAAPQY---VIPAVVSFVAPDAQFTPREVETRSEREKLMFRVKIRVAPDLLREHLDKV 299

Query: 406 RNGFPAEVLF 415
           R G P E   
Sbjct: 300 RTGLPGEAYV 309



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 63/193 (32%), Gaps = 5/193 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +K + PA +  + LL+  G  G   W           +SG    E   + + +   G + 
Sbjct: 1   MKFSKPAIIVIVVLLAAAG-AGYGWWQTQNSRLPQTIASGNGRIEAETIHVATRTGGRVV 59

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G  +  G  L   +  E    +   +  +   +    +  + +    ++    +
Sbjct: 60  EVLVGEGDFVEAGQVLARLDTEELEASLAGAEARVAAAKDTAASVTAQIAQRESELRYAD 119

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A     ++    L + H +  +V     +       +   R +     R     ++ +L
Sbjct: 120 QAL----QRATALLERGHISRQEVDQRQTARDTAEAALAAVRAQLANAERSVDAARAEVL 175

Query: 189 RALLSSHQKDLTM 201
           R      + +L  
Sbjct: 176 RIGTVIAEAELKA 188


>gi|3510693|gb|AAC33564.1| huntingtin interacting protein 1 [Homo sapiens]
          Length = 995

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 5/192 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           LI+     I  L+  ++  K+    +  +        E+   +      +    C +   
Sbjct: 334 LIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDC-EFLR 392

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +  + R  +      RS+       +        L   + + +    +L  KNA    
Sbjct: 393 AELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNA---- 448

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ +Q  +  ++ ++L     E ++ L  I++       E    L+ + ++L  +QR   
Sbjct: 449 EVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQ 508

Query: 275 DEMSKLTILEKT 286
                L    ++
Sbjct: 509 VLQGSLETSAQS 520


>gi|88807187|ref|ZP_01122699.1| hypothetical protein WH7805_11588 [Synechococcus sp. WH 7805]
 gi|88788401|gb|EAR19556.1| hypothetical protein WH7805_11588 [Synechococcus sp. WH 7805]
          Length = 359

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 57/166 (34%), Gaps = 9/166 (5%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL----KEISRDLEQNQRTFAD 275
           E    +  + L +   + +       E  D   L+   +L       + + +Q +  +  
Sbjct: 70  EVQPGQLLITLDQAQEQARLASSRAQEQKDLLELKRYEFLVPQGAAEASERDQRRAIYIA 129

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             +++   E T     + SPI GT+         +  +   P  K++  +     R ++ 
Sbjct: 130 SRAQVRAQEATLAYSNLRSPIGGTVADVTV-KVGDVVRSGDPFTKLI-RNNTLEARVEIP 187

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                 VK G    +  P   ++  K     +  +DP IS +   L
Sbjct: 188 STSATRVKVGLPVLLSLPGSDEVLAKS---TVSSVDPNISSETQAL 230



 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 10/96 (10%), Positives = 31/96 (32%), Gaps = 4/96 (4%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  +  G ++  G  L+T +  +    +   +   +     +       +FL  +
Sbjct: 57  SGRVLQLNISQGDEVQPGQLLITLDQAQEQARLASSRAQEQKDLLELKR----YEFLVPQ 112

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
                   + R    +    +  +  + +    + S
Sbjct: 113 GAAEASERDQRRAIYIASRAQVRAQEATLAYSNLRS 148


>gi|310126570|ref|XP_003120435.1| PREDICTED: hypothetical protein LOC100510050 [Homo sapiens]
          Length = 899

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 68/205 (33%), Gaps = 9/205 (4%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHSTCS 150
                  +   + LR  +   +  L  L  +   +E++ E   RE Q         +   
Sbjct: 318 AAERGDVEREAERLRAQLTVAQEGLAALRQELQGVEESREGLHREAQEARRALSDEAREK 377

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK----NLF 206
            V     S +  ++        S   ++ + E K  +L    ++ Q++ + ++     L 
Sbjct: 378 DVLLLFNSELRATICRAEQEKASFKRSKEEKEQKLLILEEAQAALQQEASALRAHLWELE 437

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE---IS 263
           +    ++ +L +  R V     E +    E   +    ++   E   + A    +     
Sbjct: 438 QARGDARQELRELHRQVRTLKAENQRRSGEAHELQAQCSQEVLELRRQAAKAEAKHEGAR 497

Query: 264 RDLEQNQRTFADEMSKLTILEKTRE 288
           +++   QR  A+  +      +  +
Sbjct: 498 KEVLGLQRKLAEVEAAGEAHGQRLQ 522


>gi|310816168|ref|YP_003964132.1| NolF secretion protein [Ketogulonicigenium vulgare Y25]
 gi|308754903|gb|ADO42832.1| NolF secretion protein [Ketogulonicigenium vulgare Y25]
          Length = 430

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 56/168 (33%), Gaps = 7/168 (4%)

Query: 214 NDLNQQERIVYKSTLEL-RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            +    +  + +S  E  R  +   ++ L  + EL        ++ L E   ++E  + +
Sbjct: 165 VEALTLQLNLARSNAEATRVQLGLAESQLARVTELVGR-GASTSSALDESRTNVEATRAS 223

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            +    ++   E    + T+ +P  G +   +      +     PL+ +V       + A
Sbjct: 224 LSAMQDQIRSAELNLSKATLTAPFDGIVAT-REAEPGAFVSVGTPLLTLV-DMSRMEMLA 281

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
                    +       V       I  + F+  +E+I P+ +     
Sbjct: 282 NAAVVDSVELAPDQQVAVTV---DGITGRTFEGEVERISPVATTGSRT 326



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 48/130 (36%), Gaps = 4/130 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++  V  +G +    +V    +  SG+++   V  G ++  G  L+       T  ++L 
Sbjct: 117 LQRQVRVTGALNPVSSV-TFSAEASGVVESVAVRVGDRVRAGDVLVQVNVEALTLQLNLA 175

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + + +  R  +   +++ + +  L  +      A +     +        +   ++ +  
Sbjct: 176 RSNAEATRVQLGLAESQLARVTELVGRGASTSSALDESRTNVEATRASLSAMQDQIRSAE 235

Query: 157 ISSVYRSLKM 166
           ++    +L  
Sbjct: 236 LNLSKATLTA 245


>gi|157149211|ref|YP_001456530.1| hypothetical protein CKO_05051 [Citrobacter koseri ATCC BAA-895]
 gi|157086416|gb|ABV16094.1| hypothetical protein CKO_05051 [Citrobacter koseri ATCC BAA-895]
          Length = 378

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 91/279 (32%), Gaps = 20/279 (7%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +D  +  +     +I T K+ L 
Sbjct: 66  ITPQVTGIVSEVTDKNNQLIKKGDVLFKIDPVRYQARVDRLQADLVTATHNIHTLKAQLA 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +      R+    D+      + ++V  +  S +  + +  L +   +  + 
Sbjct: 126 EAQANTTRVSAE---RDRLYKDYQRYLKGSQARVNPFSESDIDNARQNYLAQDAMVKGSV 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            +     S L +++   Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 183 AEQTQIQSQLDSMVDGEQSQIVSLRAQLAEAKYNLEQTVIRAPSNGYVTQVLIRPGSYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI- 296
              LR +     E   +     ++ S    +         + L       +  +IL P+ 
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLEAGDEAEVVFNALPGQVFQGKLLSIL-PVV 301

Query: 297 -------AGTIVYNQSFSSS--NYAQQSQPLMKIVPHSK 326
                   GT+      +            L+++ P+S 
Sbjct: 302 PGGSYQAQGTLQSLSV-TPGMDGVLA----LIELEPNSD 335


>gi|126642956|ref|YP_001085940.1| heavy metal RND efflux membrane fusion protein CzcB family protein
           [Acinetobacter baumannii ATCC 17978]
          Length = 445

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 24/171 (14%)

Query: 252 NLEFANYLKEISRDLEQNQRTFADEM-------SKLTILEKTREQKTILSPIAGTIVYNQ 304
             EF   L+   R L Q  R     +        ++    + +   T+ +PI+G I   +
Sbjct: 119 QTEFLAVLRTGDRSLIQASRQRLQLLGIPQNVIHQVERTRRVQSNITLQAPISGFIDSLE 178

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q L  I   +   ++ A V  KQI  +K+G +    F  ++     K  
Sbjct: 179 VRN-GMALAMGQTLATIKGIN-PIWLEAAVPEKQIAGIKRGMSVEANFAAFSQ----KVT 232

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  I P +      +      +V +++ + +      +L+ G  A V  
Sbjct: 233 GKVIDILPTLDTTSRTI------KVRIELPNPS-----GQLKPGMFASVNI 272


>gi|119476970|ref|ZP_01617251.1| putative substate-binding protein involved in drug resistance
           [marine gamma proteobacterium HTCC2143]
 gi|119449777|gb|EAW31014.1| putative substate-binding protein involved in drug resistance
           [marine gamma proteobacterium HTCC2143]
          Length = 408

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 57/143 (39%), Gaps = 6/143 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    I+ S+ +SG ++ ++ + E++S   G + +  VE G ++ +   L+  +      
Sbjct: 36  AKTEEIKSSILASGTLIYKEQI-ELRSEVIGQVSEMLVEEGDRVSKDQVLMRLDPRTFNA 94

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-----EEQLLDFLGKYHSTC 149
            ++ ++  ++     I+ +K  L  + +K+      FE         +L+D         
Sbjct: 95  DVEQQEAYVRIQTIAIERQKQELQNITSKWQRNGNLFERNMIGQDAFELIDNQYALAKID 154

Query: 150 SKVFNYGISSVYRSLKMKLTRMR 172
            +     +     +L   L R+ 
Sbjct: 155 LRSRQESLIQAQATLDKALERLE 177



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 93/296 (31%), Gaps = 19/296 (6%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           ++A  S    +     K     S +   G       ++++   +  +    ++  ++ S 
Sbjct: 21  KQATSSAVIAVNVESAKTEEIKSSILASGTLIYKEQIELRSEVIGQVSEMLVEEGDRVSK 80

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            + L+    +      ++ ++ A  +      ER   K  L+   +  ++   L   N +
Sbjct: 81  DQVLMRLDPRTFNA--DVEQQEAYVRIQTIAIERQ--KQELQNITSKWQRNGNLFERNMI 136

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS-- 305
             +A     N       DL   Q +     + L    +  E+    SPIAG         
Sbjct: 137 GQDAFELIDNQYALAKIDLRSRQESLIQAQATLDKALERLEKTVFRSPIAGIATSVDIKL 196

Query: 306 --FSSSNYAQ-QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
              + S         L+  V       +   V    I ++     A V    Y D     
Sbjct: 197 GETAISGTTNIAGSNLIT-VADPSSILVEVLVDEADIANIVIDQNADVFAVAYPDQ---A 252

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            K  ++ I    +++    Q   +    +KI  L  +  +I++R G         K
Sbjct: 253 LKGTVQSI-ATSAKRSAFRQGLSF---TVKI--LLRTAGDIDIRPGMSCRAEIFTK 302


>gi|109066265|ref|XP_001109894.1| PREDICTED: huntingtin-interacting protein 1-like isoform 1 [Macaca
           mulatta]
          Length = 1037

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 67/196 (34%), Gaps = 10/196 (5%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV---- 152
           D K   I+ L   I   K+ L+ +  +   +    + R  +L   L +      +     
Sbjct: 371 DEKDHLIERLYREISGLKAQLENMKTESQRVVLQLKGRVSELEAELAEQQHLRQQAADDC 430

Query: 153 --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 +  + R  +      RS+       +        L   + + +    +L  KNA
Sbjct: 431 EFLRAELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNA 490

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
               ++ +Q  +  ++ ++L     + ++ L  I++       E    L+ + ++L  +Q
Sbjct: 491 ----EVTKQVSMARQAQVDLEREKKQLEDSLERISDQGQRKTQEQLEVLESLKQELATSQ 546

Query: 271 RTFADEMSKLTILEKT 286
           R        L    ++
Sbjct: 547 RELQVLQGSLETSAQS 562



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 73/211 (34%), Gaps = 18/211 (8%)

Query: 91  ETTDLIDLKKVSIKNLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +  D  +  +  +  LR    DTEK+      ++ +   +A E R  +L +   +     
Sbjct: 425 QAADDCEFLRAELDELRRQREDTEKAQRSL--SEIERKAQANEQRYSKLKEKYSELVQNH 482

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL-RALLSSHQKDLTMMKNLFEK 208
           + +     + V + + M       +   +  LE+    +        Q+ L ++++L   
Sbjct: 483 ADLLRKN-AEVTKQVSMARQAQVDLEREKKQLEDSLERISDQGQRKTQEQLEVLESL--- 538

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA------NLEFANYLKEI 262
               + +L   +R +      L  +   + N    I EL  E              L  +
Sbjct: 539 ----KQELATSQRELQVLQGSLETSAQSEANWAAQIAELEKERDSLVSGAAHRDEELSAL 594

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            R+L+  Q   A     +  L K + +  ++
Sbjct: 595 RRELQDTQLKLASTEESMCQLAKDQRKMLLV 625


>gi|104781761|ref|YP_608259.1| multidrug resistance efflux pump; membrane fusion protein
           [Pseudomonas entomophila L48]
 gi|95110748|emb|CAK15461.1| multidrug resistance efflux pump; membrane fusion protein
           [Pseudomonas entomophila L48]
          Length = 430

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 60/156 (38%), Gaps = 4/156 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +    N V ++S  +G + K   + G Q+  G  L   +       +   + ++  
Sbjct: 83  ALGTVT-ATNTVNVRSRVAGELVKIHFKEGQQVKAGDLLAEIDPRSYRIALQQAEGTLAQ 141

Query: 106 LRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            +  +   +   +    L  +  + ++  ++ E Q+  F G   +  ++V +  ++  + 
Sbjct: 142 NQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVGQFQGLVKTNQAQVNDARLNLDFT 201

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            ++  ++    +    L     ++   AL+   Q +
Sbjct: 202 QIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTE 237


>gi|47717727|gb|AAT37906.1| paracingulin [Homo sapiens]
          Length = 1302

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 13/204 (6%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            + +      +  +   +R  +  E++  + L  + + LE+     + Q+ D  G      
Sbjct: 806  LASRSNTSEQDQAGTEMRVKLLQEEN--EKLQGRSEELERRVAQLQRQIEDLKGDEAKAK 863

Query: 150  S--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               K +   I  +  +L       +     R  LEN+    +  LS   ++   +    +
Sbjct: 864  ETLKKYEGEIRQLEEALVHARKEEKEAVSARRALENELEGAQGNLSQTTQEQKQLSEKLK 923

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI----S 263
            + +  +  L + +  +      L + I + +  +  I E    + LE  N L E      
Sbjct: 924  EESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADIVEASRTSTLELQNQLDEYKEKNR 983

Query: 264  RDLEQNQRTFAD-----EMSKLTI 282
            R+L + QR   +     E S+LT 
Sbjct: 984  RELAEMQRQLKEKTLEAEKSRLTA 1007



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 74/224 (33%), Gaps = 3/224 (1%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V+N   I +    +     E     + K      L+  ++  +  L     +   ++
Sbjct: 631 QLEVKNQQNIKEERERMRANLEELRSQHNEKVEENSTLQQRLEESEGELRKNLEELFQVK 690

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E  + ++ D   +      +  +    S  R     +  +     +  DL       
Sbjct: 691 MEREQHQTEIRDLQDQLSEMHDE-LDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEGR 749

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             LL   +++LT +K   ++   S   ++++ +         LRE++ E    +  +   
Sbjct: 750 EDLLRKRERELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASR 809

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            + +  + A     + + L++          +L       +++ 
Sbjct: 810 SNTSEQDQAGTEMRV-KLLQEENEKLQGRSEELERRVAQLQRQI 852



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 72/209 (34%), Gaps = 10/209 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++ +  +  +L ++  +     ++ EKS L  +      ++      EE+L D+    
Sbjct: 974  QLDEYKEKNRRELAEMQRQLKEKTLEAEKSRLTAMK-----MQDGMRLMEEELRDYQRAQ 1028

Query: 146  HS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                T  ++    +  +   L+ K             +E K S L   L   +++     
Sbjct: 1029 DEALTKRQLLEQTLKDLEYELEAKSHLKDDRSRLVKQMEAKVSQLEMEL---EEERNNSD 1085

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+ + S+  + Q    + +     ++    + ++ R   +L         +Y     
Sbjct: 1086 LLSERISRSREQMEQLRNGLLQERAARQDLECGKISLERQNKDLKSRIIHLEGSYRSSKE 1145

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + Q +   A+   +L   E+ R    +
Sbjct: 1146 GLVVQMEARIAELEDRLESEERDRANLQL 1174



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 10/178 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            ++ I   +  ++ LR  +  E++A   L      LE+  +  + +++   G Y S+   +
Sbjct: 1088 SERISRSREQMEQLRNGLLQERAARQDLECGKISLERQNKDLKSRIIHLEGSYRSSKEGL 1147

Query: 153  F---NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                   I+ +   L+ +     ++ L+   LE K   L   +      LT  K+     
Sbjct: 1148 VVQMEARIAELEDRLESEERDRANLQLSNRRLERKVKELVMQVDDEHLSLTDQKDQLS-- 1205

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                  L   +R V ++  E+      +K + R + E  D  N      L  + +DL 
Sbjct: 1206 ----LRLKAMKRQVEEAEEEIDRLESSKKKLQRELEEQMD-MNEHLQGQLNSMKKDLR 1258



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 65/160 (40%), Gaps = 3/160 (1%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +Q L       +    ++NY       +      ++  ++     L+++++      +  
Sbjct: 543 QQELTQQTNEETAKQILYNYLKEGSTDNDDATKRKVNLVFEKIQTLKSRAAGSAQGNNQA 602

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
               + +K+L E+ +    ++ + +R + +  ++ ++NI E++  +R   E     + E 
Sbjct: 603 CNSTSEVKDLLEQKSKLTIEVAELQRQL-QLEVKNQQNIKEERERMRANLEELRSQHNEK 661

Query: 256 ANYLKEISRDLEQNQRTFADEMSKL--TILEKTREQKTIL 293
                 + + LE+++      + +L    +E+ + Q  I 
Sbjct: 662 VEENSTLQQRLEESEGELRKNLEELFQVKMEREQHQTEIR 701


>gi|320158152|ref|YP_004190530.1| GTPase [Vibrio vulnificus MO6-24/O]
 gi|319933464|gb|ADV88327.1| GTPase [Vibrio vulnificus MO6-24/O]
          Length = 376

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 71/232 (30%), Gaps = 23/232 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   ++ +   +K        +     + E       A     +++    K  +EK A +
Sbjct: 99  FEAEVAKLEAKVKEASQGALGLESTLKEAEAAVIKAIAERDKAKREYERYKRGYEKGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  ++   +    +   L   + + K     I                 +  ++      
Sbjct: 159 EQQMDTTRQAFKAAQAALE--VAQSKQDQAQIA----------------LDSEVGGENTQ 200

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
            A  +++L   +   EQ  + +P  G +          +      P+M  V   +  Y  
Sbjct: 201 VAQLLAELRKAQFDLEQTVVRAPTDGYVTQLALRPGVMSVPLPLAPVMTFVHSEEKIYTA 260

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           A      +Q ++ G+ A   F        K FK  + ++ P I +     + 
Sbjct: 261 A-FRQNSLQRLQPGFEAEFMFRALP---GKVFKGEVIEVLPAIGESQFQARG 308



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 49/147 (33%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G + +  V+    + QG  L   + I     +   +  +K        L   +   ++A+
Sbjct: 72  GRVIEVPVQANQTLKQGDVLFRIDPIPFEAEVAKLEAKVKEASQGALGLESTLKEAEAAV 131

Query: 118 DFLNNKYDVLEKAFE--SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                + D  ++ +E   R  +   F  +   T  + F    +++  +   +     ++ 
Sbjct: 132 IKAIAERDKAKREYERYKRGYEKGAFTEQQMDTTRQAFKAAQAALEVAQSKQDQAQIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                   + + L A L   Q DL   
Sbjct: 192 SEVGGENTQVAQLLAELRKAQFDLEQT 218


>gi|300925669|ref|ZP_07141531.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 182-1]
 gi|301328362|ref|ZP_07221459.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 78-1]
 gi|300418237|gb|EFK01548.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 182-1]
 gi|300845202|gb|EFK72962.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 78-1]
          Length = 378

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSASEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSASEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|254502271|ref|ZP_05114422.1| putative auxiliary transport protein, MFP family [Labrenzia
           alexandrii DFL-11]
 gi|222438342|gb|EEE45021.1| putative auxiliary transport protein, MFP family [Labrenzia
           alexandrii DFL-11]
          Length = 400

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 55/156 (35%), Gaps = 8/156 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-------R 107
            +V + S   G + + +V+NG+++  G  L    D      +   ++ +  +       +
Sbjct: 63  RIVPVVSENGGTVTQIEVDNGTKVEPGQVLFRVSDETEQAAVRTAELKLAEIDKAFALAQ 122

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             + + +++LD          + FE +EE  +     Y +T  +       +    +   
Sbjct: 123 AQVRSAQASLDREEAVLQQAVEVFEDQEELRVRQSAAYTATRYEAAVADRDAGQAKVSQA 182

Query: 168 LTRMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMM 202
              +    L   + +  + +   A L   Q +L   
Sbjct: 183 QAMLDEANLQLEEVIPAQRASAEAALKQAQVELEKT 218


>gi|187730304|ref|YP_001880400.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Shigella boydii CDC 3083-94]
 gi|187427296|gb|ACD06570.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Shigella boydii CDC 3083-94]
          Length = 285

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 23/209 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K    +  ++       +  N+ +   V+  DL            EL     +     
Sbjct: 37  DGKIRAEKVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQ 95

Query: 242 RHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +  +EAN           A  L   + +++  Q +     + L   +    Q  I 
Sbjct: 96  SDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIR 155

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTAT 349
           +P++G +    +    +YA   +PL  +V       I      K+      H+++G  A 
Sbjct: 156 APVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQ 209

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +          K  +  +  I   I  Q 
Sbjct: 210 ITL----YSDNKTLRGHVSSIGRAIYDQS 234



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAIVAVLAGWWLWNYYMQ--SPWTRDGKIRAE--KVSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 156


>gi|86157446|ref|YP_464231.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85773957|gb|ABC80794.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 456

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 76/240 (31%), Gaps = 26/240 (10%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQKNML 241
             +R + +S  + +   + L E  +V    +++D    +  +  +          +K  +
Sbjct: 149 GTIRTVHASLGEHVRRGQALVELESVQVGEAESDYLATQAALRLARASAGRQEQLRKEQI 208

Query: 242 RHINE-LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
               E L     LE A      +            ++ +L    +      I +P  G +
Sbjct: 209 SSEKEYLAARQELETAQIRARSAEQKLARLGVATRDLERLGDAARRSGGLVIRAPADGIV 268

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV----KKG-YTATVRFPHY 355
           +   +       +  + ++  V      ++ A +   Q+  V    + G   A +    +
Sbjct: 269 IEMHAV-PGELVEPDESIVT-VGDVSSVWVWADLHEDQLGRVLDAQRGGRLRAEIGVKAF 326

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                      +E + P + ++           V +++T    ++    LR G  A V  
Sbjct: 327 PGAVFP---GTVELVGPSMDERTRT--------VKVRVTA---ANPGARLRAGMFATVRI 372



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 51/142 (35%), Gaps = 2/142 (1%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            IE  V+ +GE+  ++  V   SP   G I+      G  + +G  L+  E ++  +  +
Sbjct: 122 RIEAPVALTGEVRFDERRVAHVSPRMDGTIRTVHASLGEHVRRGQALVELESVQVGE-AE 180

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              ++ +             + L  +    EK + +  ++L     +  S   K+   G+
Sbjct: 181 SDYLATQAALRLARASAGRQEQLRKEQISSEKEYLAARQELETAQIRARSAEQKLARLGV 240

Query: 158 SSVYRSLKMKLTRMRSIYLNRL 179
           ++          R     + R 
Sbjct: 241 ATRDLERLGDAARRSGGLVIRA 262


>gi|62739772|gb|AAH93827.1| Cingulin-like 1 [Homo sapiens]
 gi|85567512|gb|AAI12050.1| Cingulin-like 1 [Homo sapiens]
          Length = 1302

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 13/204 (6%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            + +      +  +   +R  +  E++  + L  + + LE+     + Q+ D  G      
Sbjct: 806  LASRSNTSEQDQAGTEMRVKLLQEEN--EKLQGRSEELERRVAQLQRQIEDLKGDEAKAK 863

Query: 150  S--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               K +   I  +  +L       +     R  LEN+    +  LS   ++   +    +
Sbjct: 864  ETLKKYEGEIRQLEEALVHARKEEKEAVSARRALENELEAAQGNLSQTTQEQKQLSEKLK 923

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI----S 263
            + +  +  L + +  +      L + I + +  +  I E    + LE  N L E      
Sbjct: 924  EESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADIVEASRTSTLELQNQLDEYKEKNR 983

Query: 264  RDLEQNQRTFAD-----EMSKLTI 282
            R+L + QR   +     E S+LT 
Sbjct: 984  RELAEMQRQLKEKTLEAEKSRLTA 1007



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 74/224 (33%), Gaps = 3/224 (1%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V+N   I +    +     E     + K      L+  ++  +  L     +   ++
Sbjct: 631 QLEVKNQQNIKEERERMRANLEELRSQHNEKVEENSTLQQRLEESEGELRKNLEELFQVK 690

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E  + ++ D   +      +  +    S  R     +  +     +  DL       
Sbjct: 691 MEREQHQTEIRDLQDQLSEMHDE-LDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQ 749

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             LL   +++LT +K   ++   S   ++++ +         LRE++ E    +  +   
Sbjct: 750 EDLLRKRERELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASR 809

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            + +  + A     + + L++          +L       +++ 
Sbjct: 810 SNTSEQDQAGTEMRV-KLLQEENEKLQGRSEELERRVAQLQRQI 852



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 74/209 (35%), Gaps = 10/209 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++ +  +  +L ++  +     ++ EKS L  +      ++      EE+L D+    
Sbjct: 974  QLDEYKEKNRRELAEMQRQLKEKTLEAEKSRLTAMK-----MQDEMRLMEEELRDYQRAQ 1028

Query: 146  HS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                T  ++    +  +   L+ K             +E+K S L   L   +++     
Sbjct: 1029 DEALTKRQLLEQTLKDLEYELEAKSHLKDDRSRLVKQMEDKVSQLEMEL---EEERNNSD 1085

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+ + S+  + Q    + +     ++   ++ ++ R   +L         +Y     
Sbjct: 1086 LLSERISRSREQMEQLRNELLQERAARQDLECDKISLERQNKDLKSRIIHLEGSYRSSKE 1145

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + Q +   A+   +L   E+ R    +
Sbjct: 1146 GLVVQMEARIAELEDRLESEERDRANLQL 1174



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 10/178 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            ++ I   +  ++ LR  +  E++A   L      LE+  +  + +++   G Y S+   +
Sbjct: 1088 SERISRSREQMEQLRNELLQERAARQDLECDKISLERQNKDLKSRIIHLEGSYRSSKEGL 1147

Query: 153  F---NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                   I+ +   L+ +     ++ L+   LE K   L   +      LT  K+     
Sbjct: 1148 VVQMEARIAELEDRLESEERDRANLQLSNRRLERKVKELVMQVDDEHLSLTDQKDQLS-- 1205

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                  L   +R V ++  E+      +K + R + E  D  N      L  + +DL 
Sbjct: 1206 ----LRLKAMKRQVEEAEEEIDRLESSKKKLQRELEEQMD-MNEHLQGQLNSMKKDLR 1258



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 65/160 (40%), Gaps = 3/160 (1%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +Q L       +    ++NY       +      ++  ++     L+++++      +  
Sbjct: 543 QQELTQQTNEETAKQILYNYLKEGSTDNDDATKRKVNLVFEKIQTLKSRAAGSAQGNNQA 602

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
               + +K+L E+ +    ++ + +R + +  ++ ++NI E++  +R   E     + E 
Sbjct: 603 CNSTSEVKDLLEQKSKLTIEVAELQRQL-QLEVKNQQNIKEERERMRANLEELRSQHNEK 661

Query: 256 ANYLKEISRDLEQNQRTFADEMSKL--TILEKTREQKTIL 293
                 + + LE+++      + +L    +E+ + Q  I 
Sbjct: 662 VEENSTLQQRLEESEGELRKNLEELFQVKMEREQHQTEIR 701


>gi|23502529|ref|NP_698656.1| HlyD family secretion protein [Brucella suis 1330]
 gi|161619605|ref|YP_001593492.1| RND family efflux transporter MFP subunit [Brucella canis ATCC
           23365]
 gi|260568763|ref|ZP_05839231.1| secretion protein HlyD [Brucella suis bv. 4 str. 40]
 gi|23348527|gb|AAN30571.1| HlyD family secretion protein [Brucella suis 1330]
 gi|161336416|gb|ABX62721.1| efflux transporter, RND family, MFP subunit [Brucella canis ATCC
           23365]
 gi|260154147|gb|EEW89229.1| secretion protein HlyD [Brucella suis bv. 4 str. 40]
          Length = 408

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 62/186 (33%), Gaps = 21/186 (11%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW-------------SILLP------IEISVSSS 47
            + ++      +    LS   II    W             S L        IE ++++ 
Sbjct: 15  ASARKRAKGKRRWWLWLSAAAIIIGAGWYFYGSYKADGEKSSYLAETVTRGDIENAITAV 74

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G + +    V + +  SG +K  +VE G  + QG  +   +       +++    + NL+
Sbjct: 75  GTL-SALRSVNVGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIAGAQLDNLK 133

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             + ++ + L          +    +R   Q            ++     +++  R  + 
Sbjct: 134 AQLLSKDAQLTLKKFNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNAQIRQQEA 193

Query: 167 KLTRMR 172
           +L   +
Sbjct: 194 QLASDK 199



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 15/210 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q D  + + +   + L L++    ++  L     +      +    L     +++    
Sbjct: 127 AQLDNLKAQLLSKDAQLTLKKFNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNA 186

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
               + ++L   +      +I SP+ GT+V   +          Q    IV  + L    
Sbjct: 187 QIRQQEAQLASDKVDLGYTSIYSPMEGTVVDEAA-KEGETLNAVQSAPTIVTVADLKVMT 245

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A+V+   I  +K G      F        K+F   + +I P  +  +N +    YY +
Sbjct: 246 VEAQVSEADISKLKPGMPVY--FTLLGQPD-KRFTGTLRQIKPTPATDNNVVL---YYAL 299

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                     +   EL     A+V F    
Sbjct: 300 F------DVPNPTGELMIDMSAQVYFVLGE 323


>gi|323699536|ref|ZP_08111448.1| efflux transporter, RND family, MFP subunit [Desulfovibrio sp.
           ND132]
 gi|323459468|gb|EGB15333.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           desulfuricans ND132]
          Length = 380

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/178 (10%), Positives = 58/178 (32%), Gaps = 5/178 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +  + +V  +++  +G + +  V  G ++ +G  L+  +   +   ++  K ++ +
Sbjct: 58  AVGTVQAKTDVR-VEAQVTGRVLEVLVRPGDRVAKGDRLVVLDSRASQTRLERSKQALFS 116

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRS 163
            R  +   +  L      Y   E  +    +  +      +        +    +++ R+
Sbjct: 117 ARSQVAQARDGLASAKAAYTKSESTYRRMSQLFEQKVVTAEEVEKAESAYLQAKAALSRA 176

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN--AVSQNDLNQQ 219
            +               ++     L       Q+   + + L E    A    +L   
Sbjct: 177 EQGVAGAEAQAREADKVVQEADIDLGYTTIMAQEPGEVARRLVEPGDLAFPNKELLTL 234



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/325 (12%), Positives = 98/325 (30%), Gaps = 47/325 (14%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDV-LEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            ++   R  +     A+  +  K DV +E     R  ++L   G   +   ++      +
Sbjct: 43  ATVVAERAVLPRLFDAVGTVQAKTDVRVEAQVTGRVLEVLVRPGDRVAKGDRLVVLDSRA 102

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
               L+     + S         +  +  +A  +  +     M  LFE+  V+  ++ + 
Sbjct: 103 SQTRLERSKQALFSARSQVAQARDGLASAKAAYTKSESTYRRMSQLFEQKVVTAEEVEKA 162

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E    ++   L               E            ++E   DL             
Sbjct: 163 ESAYLQAKAALSRAEQGVAGAEAQAREA--------DKVVQEADIDLG------------ 202

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                      TI++   G +   +     + A  ++ L+ +       ++ A V    I
Sbjct: 203 ---------YTTIMAQEPGEVAR-RLVEPGDLAFPNKELLTLH-TGGSMHLEAMVREALI 251

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +K G + +V      D        ++++I+P+      +      + V +++ +    
Sbjct: 252 GRIKLGDSLSVIITALNDKE--PLAGVVQEIEPLADPVTRS------FLVKVRLPE---- 299

Query: 400 DNNIELRNGFPAEVLFTAKNT-TLA 423
                L  G    +L       T+ 
Sbjct: 300 --RPGLYPGMFGRLLVPLGERETVL 322


>gi|294056114|ref|YP_003549772.1| secretion protein HlyD family protein [Coraliomargarita akajimensis
           DSM 45221]
 gi|293615447|gb|ADE55602.1| secretion protein HlyD family protein [Coraliomargarita akajimensis
           DSM 45221]
          Length = 698

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 86/229 (37%), Gaps = 20/229 (8%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVEN 74
            ++   +LS + ++GL +    +P+  + S  G + + ++  V +  P  G +++  V +
Sbjct: 402 RVRLRAVLSCLLVLGLTS----IPLARNASFPGVVRMADEQEVRVDCP--GFVREVHVTD 455

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G  L+  E+ E    +   +++++  R     +++A D        ++ +   R
Sbjct: 456 GDWVEAGQLLVVLENPEALQRLRQLRLNLQEARLLAQRQQAAGDL------YMKASTSQR 509

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             QL + + +  S    +      S   +L     R+ S      +L          +  
Sbjct: 510 IAQLSEEVAEVASYVDSLDIRAERSGRVALGRLQDRIGSYVETGFNLMQI-----GEVQG 564

Query: 195 HQKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLELRENIHEQKNML 241
               + + ++  E+ AV   ++         ++   E+     +    +
Sbjct: 565 WHTLVAIPESQAEQVAVRDGEVVSLLLVGRSHQVRGEILSMTADANARI 613


>gi|293446020|ref|ZP_06662442.1| ydhJ protein [Escherichia coli B088]
 gi|331677510|ref|ZP_08378185.1| putative membrane protein [Escherichia coli H591]
 gi|332279208|ref|ZP_08391621.1| conserved hypothetical protein [Shigella sp. D9]
 gi|291322850|gb|EFE62278.1| ydhJ protein [Escherichia coli B088]
 gi|331073970|gb|EGI45290.1| putative membrane protein [Escherichia coli H591]
 gi|332101560|gb|EGJ04906.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 288

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 23/209 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K    +  ++       +  N+ +   V+  DL            EL     +     
Sbjct: 40  DGKIRAEKVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQ 98

Query: 242 RHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +  +EAN           A  L   + +++  Q +     + L   +    Q  I 
Sbjct: 99  SDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIR 158

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTAT 349
           +P++G +    +    +YA   +PL  +V       I      K+      H+++G  A 
Sbjct: 159 APVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQ 212

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +          K  +  +  I   I  Q 
Sbjct: 213 ITL----YSDNKTLRGHVSSIGRAIYDQS 237



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 4   MSIKTIKYFSTIIVAIVAVLAGWWLWNYYMQ--SPWTRDGKIRAE--KVSITPQVSGRIV 59

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 60  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 119

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 120 SAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 159


>gi|157736958|ref|YP_001489641.1| HlyD family secretion protein [Arcobacter butzleri RM4018]
 gi|157698812|gb|ABV66972.1| HlyD family secretion protein [Arcobacter butzleri RM4018]
          Length = 420

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 74/233 (31%), Gaps = 35/233 (15%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY------------------DE 250
             +++ D  + +  V  ST  L   +  QK     +N                      +
Sbjct: 104 QILAKIDTVKLQSQVDSSTAALAIAVANQKESQVLLNNKKTLYDRTLNMYKNSGGKYPSK 163

Query: 251 ANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
             L+   +  E + + LE  +       S L   ++  E+ ++ S I G ++  +     
Sbjct: 164 NELDDTRFSYEAAIESLEAAKAKVLQSQSNLKTDKQNLEKASVKSSIDGIVLNREV-EVG 222

Query: 310 NYAQQ---SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                   +  L  I        +   +    +  +KK    T     Y +   K F   
Sbjct: 223 QTLAATMSAPKLFTIAKDLTNMDLIVSIDEADVADIKKDLPVTFTVDAYPN---KVFNGK 279

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           ++++  +     N + T   YE ++ +      + ++ L+ G  A      K 
Sbjct: 280 VKQV-RLNPVDTNGVVT---YETVVSVD-----NEDLLLKPGMTATAKIITKE 323



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 68/175 (38%), Gaps = 5/175 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + + VS++G +    N VEI    SG +K+  V+   ++  G  L   + ++    +D  
Sbjct: 63  LSVVVSTTGNLNP-TNSVEIGIEVSGTLKEIFVDFNDEVKAGQILAKIDTVKLQSQVD-- 119

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK-VFNYGIS 158
             S   L   +  +K +   LNNK  + ++     +     +  K     ++  +   I 
Sbjct: 120 -SSTAALAIAVANQKESQVLLNNKKTLYDRTLNMYKNSGGKYPSKNELDDTRFSYEAAIE 178

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           S+  +    L    ++  ++ +LE  S           +++ + + L    +  +
Sbjct: 179 SLEAAKAKVLQSQSNLKTDKQNLEKASVKSSIDGIVLNREVEVGQTLAATMSAPK 233


>gi|157155760|ref|YP_001462936.1| MFP family transporter [Escherichia coli E24377A]
 gi|191165943|ref|ZP_03027780.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B7A]
 gi|193064896|ref|ZP_03045972.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E22]
 gi|194425771|ref|ZP_03058327.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B171]
 gi|209918958|ref|YP_002293042.1| hypothetical protein ECSE_1767 [Escherichia coli SE11]
 gi|218554212|ref|YP_002387125.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli IAI1]
 gi|218695207|ref|YP_002402874.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli 55989]
 gi|256018161|ref|ZP_05432026.1| undecaprenyl pyrophosphate phosphatase [Shigella sp. D9]
 gi|260843950|ref|YP_003221728.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O103:H2
           str. 12009]
 gi|260855469|ref|YP_003229360.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O26:H11
           str. 11368]
 gi|260868136|ref|YP_003234538.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O111:H-
           str. 11128]
 gi|300819598|ref|ZP_07099791.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 107-1]
 gi|300821483|ref|ZP_07101630.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 119-7]
 gi|300924675|ref|ZP_07140624.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 182-1]
 gi|301326595|ref|ZP_07219934.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 78-1]
 gi|309793410|ref|ZP_07687837.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 145-7]
 gi|331668323|ref|ZP_08369171.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli TA271]
 gi|157077790|gb|ABV17498.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E24377A]
 gi|190904074|gb|EDV63786.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B7A]
 gi|192927383|gb|EDV82001.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E22]
 gi|194415826|gb|EDX32092.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B171]
 gi|209912217|dbj|BAG77291.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218351939|emb|CAU97671.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli 55989]
 gi|218360980|emb|CAQ98553.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli IAI1]
 gi|257754118|dbj|BAI25620.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O26:H11
           str. 11368]
 gi|257759097|dbj|BAI30594.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O103:H2
           str. 12009]
 gi|257764492|dbj|BAI35987.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O111:H-
           str. 11128]
 gi|300419140|gb|EFK02451.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 182-1]
 gi|300525986|gb|EFK47055.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 119-7]
 gi|300527846|gb|EFK48908.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 107-1]
 gi|300846757|gb|EFK74517.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 78-1]
 gi|308122997|gb|EFO60259.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 145-7]
 gi|320174149|gb|EFW49314.1| putative membrane protein [Shigella dysenteriae CDC 74-1112]
 gi|320197827|gb|EFW72435.1| Putative membrane protein [Escherichia coli EC4100B]
 gi|323152850|gb|EFZ39120.1| hypothetical protein ECEPECA14_5209 [Escherichia coli EPECa14]
 gi|323163506|gb|EFZ49332.1| hypothetical protein ECE128010_0359 [Escherichia coli E128010]
 gi|323169952|gb|EFZ55608.1| hypothetical protein ECLT68_5594 [Escherichia coli LT-68]
 gi|323180960|gb|EFZ66498.1| hypothetical protein ECOK1180_0254 [Escherichia coli 1180]
 gi|323186083|gb|EFZ71439.1| hypothetical protein ECOK1357_0547 [Escherichia coli 1357]
 gi|323948059|gb|EGB44051.1| HlyD family protein secretion protein [Escherichia coli H120]
 gi|324016557|gb|EGB85776.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 117-3]
 gi|324119131|gb|EGC13019.1| HlyD family protein secretion protein [Escherichia coli E1167]
 gi|331063517|gb|EGI35428.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli TA271]
          Length = 285

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 23/209 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K    +  ++       +  N+ +   V+  DL            EL     +     
Sbjct: 37  DGKIRAEKVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQ 95

Query: 242 RHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +  +EAN           A  L   + +++  Q +     + L   +    Q  I 
Sbjct: 96  SDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIR 155

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTAT 349
           +P++G +    +    +YA   +PL  +V       I      K+      H+++G  A 
Sbjct: 156 APVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQ 209

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +          K  +  +  I   I  Q 
Sbjct: 210 ITL----YSDNKTLRGHVSSIGRAIYDQS 234



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAIVAVLAGWWLWNYYMQ--SPWTRDGKIRAE--KVSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 156


>gi|159043812|ref|YP_001532606.1| efflux transporter [Dinoroseobacter shibae DFL 12]
 gi|157911572|gb|ABV93005.1| efflux transporter [Dinoroseobacter shibae DFL 12]
          Length = 415

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/282 (11%), Positives = 80/282 (28%), Gaps = 40/282 (14%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR--SIYLNRLDLENKSSLLRALLSSHQK 197
           D + +      +     + S       +L  +R  +       L+   +   A L+  ++
Sbjct: 82  DMIARIDPRDFERQIAQLESQRDQSAAQLAALRTGARTEEISALQAAVASAEAQLAQAEE 141

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                + L E+   +   L+  E  +  +   L+    +                     
Sbjct: 142 QAARTRQLAERGVAAAAQLDNDEAALRVAQANLQAQREQLAIGQSGGR------------ 189

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                  D+E  +       +++ I     +  T+ +P  G I   +     +  Q  QP
Sbjct: 190 -----PEDIEAAEAGLRGLETQIQIARDQLDDATLRAPFPGIIAR-RYIDDFSIVQPGQP 243

Query: 318 L-----MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +     +++V           V    +  +       +R     ++        +   + 
Sbjct: 244 IVLLQNLQVV----HLTFD--VPGPDVTALSANGQGNIR----NEVTFDALPGRVFDAEI 293

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           +      +  TQ  Y   + +T    S +   +  G    V+
Sbjct: 294 VEFSVQADSATQT-YRGRVAVT----SPDETTILPGMVGRVI 330



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 20/197 (10%), Positives = 57/197 (28%), Gaps = 7/197 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
              V +   I+   + VE+     G + +  +   + +  G  +   +  +    I   +
Sbjct: 41  AEVVRTYPAIVLPSDEVELSFRVGGPVVELPIRAATSVETGDMIARIDPRDFERQIAQLE 100

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                    +   ++       +   L+ A  S E QL     +  +  ++       + 
Sbjct: 101 SQRDQSAAQLAALRTGA--RTEEISALQAAVASAEAQLA--QAEEQAARTRQLAERGVAA 156

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              L      +R   + + +L+ +   L    S  + +         +   +Q  + + +
Sbjct: 157 AAQLDNDEAALR---VAQANLQAQREQLAIGQSGGRPEDIEAAEAGLRGLETQIQIARDQ 213

Query: 221 RIVYKSTLELRENIHEQ 237
                        I  +
Sbjct: 214 LDDATLRAPFPGIIARR 230


>gi|27367389|ref|NP_762916.1| multidrug resistance efflux pump [Vibrio vulnificus CMCP6]
 gi|27358958|gb|AAO07906.1|AE016811_147 Multidrug resistance efflux pump [Vibrio vulnificus CMCP6]
          Length = 354

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 67/212 (31%), Gaps = 21/212 (9%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             S  ++ +   +     SL+  L +  ++Y  R       +  +A   +  ++   ++ 
Sbjct: 72  LFSIDARKYRIALEQAKLSLQSALEKEATLYSQREAALANIARAQATYDNAHREYLRLQK 131

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L  +  +S++ L                   +       +     +A  +  N ++    
Sbjct: 132 LSTQQVISRSSL-------------------DNSFAQNQVANANLKAEQQSLNVIEAQLG 172

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
             E          + +   +       +L+P  G +   Q     + A  +QPL+  +P 
Sbjct: 173 QGEGQSTAVRVAQNGIEKAQLDLANTQVLAPSDGVVTNLQL-EVGSMANANQPLLTFIPT 231

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
               ++      K +  V   Y A V F  Y 
Sbjct: 232 GS-LWVTGDFREKSVAKVDDRYHAMVAFDAYP 262



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 73/206 (35%), Gaps = 19/206 (9%)

Query: 24  SIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP 83
            I+  I L  + IL      +++ G +  +  VV++    SG + + Q+ N   + QG  
Sbjct: 14  LIVLFIALFFYIILADQHAPITTEGRV--QGYVVQVAPEVSGKVTQVQIHNNQHVQQGDV 71

Query: 84  LLTFEDIETTDLIDLKKVSIKNLR------------CHIDTEKSALDFLNNKYDVLEKAF 131
           L + +  +    ++  K+S+++                 +  ++   + N   + L    
Sbjct: 72  LFSIDARKYRIALEQAKLSLQSALEKEATLYSQREAALANIARAQATYDNAHREYLRLQK 131

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            S ++ +           ++V N  + +  +SL +   ++               + +  
Sbjct: 132 LSTQQVISRSSLDNSFAQNQVANANLKAEQQSLNVIEAQLGQGEGQ----STAVRVAQNG 187

Query: 192 LSSHQKDLTMMKNLF-EKNAVSQNDL 216
           +   Q DL   + L      V+   L
Sbjct: 188 IEKAQLDLANTQVLAPSDGVVTNLQL 213


>gi|323138962|ref|ZP_08074023.1| efflux transporter, RND family, MFP subunit [Methylocystis sp. ATCC
           49242]
 gi|322395808|gb|EFX98348.1| efflux transporter, RND family, MFP subunit [Methylocystis sp. ATCC
           49242]
          Length = 393

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 67/205 (32%), Gaps = 25/205 (12%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-ANYLKEISRDLEQNQRTFA 274
           L +  +    + LE  +   E    L  IN   D+A L+  A     +  D+   +   A
Sbjct: 110 LLELRKDTDNARLESLKAAAE----LNAINLRRDQAQLKIRAASQATVDTDVANLRSANA 165

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
             + +    E    QKT+L+P AG  +  +      Y      ++ +       ++   +
Sbjct: 166 QVVQQ----EAVIAQKTLLAPFAGR-LGIRQIDLGQYIGAGTVIVTLQALD-PIFLDFVL 219

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             + +  V  G         +       FK  I+ I   +     N        V ++  
Sbjct: 220 PQQDLNGVSVGQAIAATVDAFPGQT---FKGKIDAISSKVDLASRN--------VQIR-- 266

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
             + ++   +LR G  A +      
Sbjct: 267 -ASLANAERKLRPGMFASIDIATGK 290



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/121 (10%), Positives = 38/121 (31%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SGI++K   ++G  +  G  LL          ++  K + +    ++  +++ L     
Sbjct: 89  TSGIVEKIHFQSGQDVKTGQILLELRKDTDNARLESLKAAAELNAINLRRDQAQLKIRAA 148

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
               ++    +        + +      K      +      ++ L +        + L+
Sbjct: 149 SQATVDTDVANLRSANAQVVQQEAVIAQKTLLAPFAGRLGIRQIDLGQYIGAGTVIVTLQ 208

Query: 183 N 183
            
Sbjct: 209 A 209


>gi|209883474|ref|YP_002287331.1| putative fusaric acid resistance protein [Oligotropha
           carboxidovorans OM5]
 gi|209871670|gb|ACI91466.1| putative fusaric acid resistance protein [Oligotropha
           carboxidovorans OM5]
          Length = 299

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 56/163 (34%), Gaps = 24/163 (14%)

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
             ++ L + +    +  + SP+ G +         +YA   + ++ +V  S   Y+    
Sbjct: 139 QALAALNVAKLNLARTQVRSPVNGHVTNLLLD-KGDYATAGRAMLAVV-DSDSYYVAGYF 196

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ---------- 384
              ++Q +  G    +R   +      + +  +  I   I+ +DN   +           
Sbjct: 197 EETKLQAIHIGDRVAIRLLGFK----PELRGHVASIARAITDRDNAPASDLVANVNPTFN 252

Query: 385 -----EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
                +   V + I  +      I L  G  A V+ T  + T+
Sbjct: 253 WVRLAQRIPVRISIDRV---PEGITLSAGMTATVVVTGPDETM 292


>gi|167577678|ref|ZP_02370552.1| multidrug resistance protein [Burkholderia thailandensis TXDOH]
          Length = 379

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 74/241 (30%), Gaps = 12/241 (4%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            ++    +   T + V       V     +                 + +     +++ +
Sbjct: 49  NVVQIAAQIQGTVTDVLVADTQQVKAGQALVKLDDADASAAFAQARAQLAQAVRQVANTR 108

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             + M +   +     + DL   ++          E +  ++      +    +A L  A
Sbjct: 109 LSMGMYEETVK---AREADLTLAQQAYRARAGASVEVVAPEELARAKSSLANAQAALAGA 165

Query: 257 NYLKEISRDL-----EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               E +R L      +         ++  +  +   + TI+SP+ GT+   +S      
Sbjct: 166 QAQLEAARALGSERPVEQNPAVQQAAAQFKLAYRNLRRTTIVSPVDGTV-GQRSVQIGQQ 224

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                PLM +V   +  ++ A     QI+H++ G    +    Y       +   +E   
Sbjct: 225 VGPGVPLMSVV-QLRQVWVEANFKEGQIRHMRVGQPVRLESDLYGARVT--YHGRVEGFS 281

Query: 372 P 372
            
Sbjct: 282 A 282



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 61/180 (33%), Gaps = 12/180 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-------SIK 104
              NVV+I +   G +    V +  Q+  G  L+  +D + +      +         + 
Sbjct: 46  VAGNVVQIAAQIQGTVTDVLVADTQQVKAGQALVKLDDADASAAFAQARAQLAQAVRQVA 105

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           N R  +   +  +        + ++A+ +R    ++ +       +K       +     
Sbjct: 106 NTRLSMGMYEETVKAREADLTLAQQAYRARAGASVEVVAPEELARAKSSLANAQAALAGA 165

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + +L   R++   R   +N      A+  +  +     +NL     VS  D    +R V 
Sbjct: 166 QAQLEAARALGSERPVEQN-----PAVQQAAAQFKLAYRNLRRTTIVSPVDGTVGQRSVQ 220


>gi|163845254|ref|YP_001622909.1| RND family efflux transporter MFP subunit [Brucella suis ATCC
           23445]
 gi|163675977|gb|ABY40087.1| efflux transporter, RND family, MFP subunit [Brucella suis ATCC
           23445]
          Length = 408

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 15/210 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q D  + + +   + L L++    ++  L     +      +    L     +++    
Sbjct: 127 AQLDNLKAQLLSKDAQLTLKKLNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNA 186

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
               + ++L   +      +I SP+ GT+V   +          Q    IV  + L    
Sbjct: 187 QIHQQEAQLASDKVDLGYTSIYSPMEGTVVDEAA-KEGETLNAVQSAPTIVTVADLKVMT 245

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A+V+   I  +K G      F        K+F   + +I P  +  +N +    YY +
Sbjct: 246 VEAQVSEADISKLKPGMPVY--FTLLGQPD-KRFTGTLRQIKPTPATDNNVVL---YYAL 299

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                     +   EL     A+V F    
Sbjct: 300 F------DVPNPTGELMIDMSAQVYFVLGE 323



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 67/193 (34%), Gaps = 29/193 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW-------------SILLP------IEISVSSS 47
            + ++      +    LS   II    W             S L        IE ++++ 
Sbjct: 15  ASARKRAKGKRRWWLWLSAAAIIIGAGWYFYGSYKADGEKSSYLAETVTRGDIENAITAV 74

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G + +    V + +  SG +K  +VE G  + QG  +   +       +++    + NL+
Sbjct: 75  GTL-SALRSVNVGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIAGAQLDNLK 133

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             + ++ + L         L+K   +R++ LL   G   +T  +  N  +      +K  
Sbjct: 134 AQLLSKDAQL--------TLKKLNAARQKSLLATRGVSQATVDQA-NADLLMAEAEVKAL 184

Query: 168 LTRMRSIYLNRLD 180
             ++         
Sbjct: 185 NAQIHQQEAQLAS 197


>gi|115374215|ref|ZP_01461501.1| putative protein secretion protein, HlyD family [Stigmatella
           aurantiaca DW4/3-1]
 gi|310818048|ref|YP_003950406.1| secretion family protein HlyD [Stigmatella aurantiaca DW4/3-1]
 gi|115368758|gb|EAU67707.1| putative protein secretion protein, HlyD family [Stigmatella
           aurantiaca DW4/3-1]
 gi|309391120|gb|ADO68579.1| Secretion protein, HlyD family protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 346

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/377 (12%), Positives = 111/377 (29%), Gaps = 68/377 (18%)

Query: 41  EISVSSS--GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           + ++     G  + E     + S  S  + +  V+ G+ + +G  L+  +  E       
Sbjct: 27  DAALRGPSGGTGVIEGTDYNVASRLSARVVRVNVKKGAVVKKGDVLMALDCAEP------ 80

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            + ++  +   ++  K+  +    +     +A  + +  +L    +  +  ++       
Sbjct: 81  -EATLAEVEARLEASKAQSEAAGAQAQASLRAKNAAQAAILVAKAQAEALAAQ------- 132

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                                              + ++    +  L +  AVS  D   
Sbjct: 133 ---------------------------------RDTARRQAERLHALGQDVAVSNAD--- 156

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                 ++        H+    L   N    +A           ++  + + RT     +
Sbjct: 157 ------QALGAAEGLKHQAAAALASSNLNQQQAEASVEQSRAAQAQA-QASLRTVTAAEA 209

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA--KVTP 336
            L        +  + SP AG +     F           L +IV   +   +RA   +  
Sbjct: 210 ALIRARLMVAECEVRSPSAGLVDEV-FFEEGELPLPGATLARIVNLDE---VRATFYLPN 265

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
            ++   +    A +    Y       F   I  +         N+QT+   + ++   ++
Sbjct: 266 AELAAARPSERALIEADAYPQRT---FAGAIRTVSTQAEFTPRNIQTRTDRDRLVYAVEV 322

Query: 397 AFSDNNIELRNGFPAEV 413
           A  +    LR G P  V
Sbjct: 323 AVPNTEQLLRPGMPVRV 339


>gi|111600321|gb|AAI18919.1| Cingulin-like 1 [Homo sapiens]
 gi|119597927|gb|EAW77521.1| cingulin-like 1 [Homo sapiens]
          Length = 1302

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 13/204 (6%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            + +      +  +   +R  +  E++  + L  + + LE+     + Q+ D  G      
Sbjct: 806  LASRSNTSEQDQAGTEMRVKLLQEEN--EKLQGRSEELERRVAQLQRQIEDLKGDEAKAK 863

Query: 150  S--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               K +   I  +  +L       +     R  LEN+    +  LS   ++   +    +
Sbjct: 864  ETLKKYEGEIRQLEEALVHARKEEKEAVSARRALENELEAAQGNLSQTTQEQKQLSEKLK 923

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI----S 263
            + +  +  L + +  +      L + I + +  +  I E    + LE  N L E      
Sbjct: 924  EESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADIVEASRTSTLELQNQLDEYKEKNR 983

Query: 264  RDLEQNQRTFAD-----EMSKLTI 282
            R+L + QR   +     E S+LT 
Sbjct: 984  RELAEMQRQLKEKTLEAEKSRLTA 1007



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 74/224 (33%), Gaps = 3/224 (1%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V+N   I +    +     E     + K      L+  ++  +  L     +   ++
Sbjct: 631 QLEVKNQQNIKEERERMRANLEELRSQHNEKVEENSTLQQRLEESEGELRKNLEELFQVK 690

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E  + ++ D   +      +  +    S  R     +  +     +  DL       
Sbjct: 691 MEREQHQTEIRDLQDQLSEMHDE-LDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQ 749

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             LL   +++LT +K   ++   S   ++++ +         LRE++ E    +  +   
Sbjct: 750 EDLLRKRERELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASR 809

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            + +  + A     + + L++          +L       +++ 
Sbjct: 810 SNTSEQDQAGTEMRV-KLLQEENEKLQGRSEELERRVAQLQRQI 852



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 74/209 (35%), Gaps = 10/209 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++ +  +  +L ++  +     ++ EKS L  +      ++      EE+L D+    
Sbjct: 974  QLDEYKEKNRRELAEMQRQLKEKTLEAEKSRLTAMK-----MQDEMRLMEEELRDYQRAQ 1028

Query: 146  HS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                T  ++    +  +   L+ K             +E+K S L   L   +++     
Sbjct: 1029 DEALTKRQLLEQTLKDLEYELEAKSHLKDDRSRLVKQMEDKVSQLEMEL---EEERNNSD 1085

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+ + S+  + Q    + +     ++   ++ ++ R   +L         +Y     
Sbjct: 1086 LLSERISRSREQMEQLRNELLQERAARQDLECDKISLERQNKDLKSRIIHLEGSYRSSKE 1145

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + Q +   A+   +L   E+ R    +
Sbjct: 1146 GLVVQMEARIAELEDRLESEERDRANLQL 1174



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 10/178 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            ++ I   +  ++ LR  +  E++A   L      LE+  +  + +++   G Y S+   +
Sbjct: 1088 SERISRSREQMEQLRNELLQERAARQDLECDKISLERQNKDLKSRIIHLEGSYRSSKEGL 1147

Query: 153  F---NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                   I+ +   L+ +     ++ L+   LE K   L   +      LT  K+     
Sbjct: 1148 VVQMEARIAELEDRLESEERDRANLQLSNRRLERKVKELVMQVDDEHLSLTDQKDQLS-- 1205

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                  L   +R V ++  E+      +K + R + E  D  N      L  + +DL 
Sbjct: 1206 ----LRLKAMKRQVEEAEEEIDRLESSKKKLQRELEEQMD-MNEHLQGQLNSMKKDLR 1258



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 65/160 (40%), Gaps = 3/160 (1%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +Q L       +    ++NY       +      ++  ++     L+++++      +  
Sbjct: 543 QQELTQQTNEETAKQILYNYLKEGSTDNDDATKRKVNLVFEKIQTLKSRAAGSAQGNNQA 602

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
               + +K+L E+ +    ++ + +R + +  ++ ++NI E++  +R   E     + E 
Sbjct: 603 CNSTSEVKDLLEQKSKLTIEVAELQRQL-QLEVKNQQNIKEERERMRANLEELRSQHNEK 661

Query: 256 ANYLKEISRDLEQNQRTFADEMSKL--TILEKTREQKTIL 293
                 + + LE+++      + +L    +E+ + Q  I 
Sbjct: 662 VEENSTLQQRLEESEGELRKNLEELFQVKMEREQHQTEIR 701


>gi|31982906|ref|NP_116255.2| cingulin-like protein 1 [Homo sapiens]
 gi|332278171|sp|Q0VF96|CGNL1_HUMAN RecName: Full=Cingulin-like protein 1; AltName:
            Full=Junction-associated coiled-coil protein; AltName:
            Full=Paracingulin
 gi|31074979|gb|AAP42073.1| KIAA1749 protein [Homo sapiens]
          Length = 1302

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 13/204 (6%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            + +      +  +   +R  +  E++  + L  + + LE+     + Q+ D  G      
Sbjct: 806  LASRSNTSEQDQAGTEMRVKLLQEEN--EKLQGRSEELERRVAQLQRQIEDLKGDEAKAK 863

Query: 150  S--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               K +   I  +  +L       +     R  LEN+    +  LS   ++   +    +
Sbjct: 864  ETLKKYEGEIRQLEEALVHARKEEKEAVSARRALENELEAAQGNLSQTTQEQKQLSEKLK 923

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI----S 263
            + +  +  L + +  +      L + I + +  +  I E    + LE  N L E      
Sbjct: 924  EESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADIVEASRTSTLELQNQLDEYKEKNR 983

Query: 264  RDLEQNQRTFAD-----EMSKLTI 282
            R+L + QR   +     E S+LT 
Sbjct: 984  RELAEMQRQLKEKTLEAEKSRLTA 1007



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 74/224 (33%), Gaps = 3/224 (1%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V+N   I +    +     E     + K      L+  ++  +  L     +   ++
Sbjct: 631 QLEVKNQQNIKEERERMRANLEELRSQHNEKVEENSTLQQRLEESEGELRKNLEELFQVK 690

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E  + ++ D   +      +  +    S  R     +  +     +  DL       
Sbjct: 691 MEREQHQTEIRDLQDQLSEMHDE-LDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQ 749

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             LL   +++LT +K   ++   S   ++++ +         LRE++ E    +  +   
Sbjct: 750 EDLLRKRERELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASR 809

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            + +  + A     + + L++          +L       +++ 
Sbjct: 810 SNTSEQDQAGTEMRV-KLLQEENEKLQGRSEELERRVAQLQRQI 852



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 74/209 (35%), Gaps = 10/209 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++ +  +  +L ++  +     ++ EKS L  +      ++      EE+L D+    
Sbjct: 974  QLDEYKEKNRRELAEMQRQLKEKTLEAEKSRLTAMK-----MQDEMRLMEEELRDYQRAQ 1028

Query: 146  HS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                T  ++    +  +   L+ K             +E+K S L   L   +++     
Sbjct: 1029 DEALTKRQLLEQTLKDLEYELEAKSHLKDDRSRLVKQMEDKVSQLEMEL---EEERNNSD 1085

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+ + S+  + Q    + +     ++   ++ ++ R   +L         +Y     
Sbjct: 1086 LLSERISRSREQMEQLRNELLQERAARQDLECDKISLERQNKDLKSRIIHLEGSYRSSKE 1145

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + Q +   A+   +L   E+ R    +
Sbjct: 1146 GLVVQMEARIAELEDRLESEERDRANLQL 1174



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 10/178 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            ++ I   +  ++ LR  +  E++A   L      LE+  +  + +++   G Y S+   +
Sbjct: 1088 SERISRSREQMEQLRNELLQERAARQDLECDKISLERQNKDLKSRIIHLEGSYRSSKEGL 1147

Query: 153  F---NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                   I+ +   L+ +     ++ L+   LE K   L   +      LT  K+     
Sbjct: 1148 VVQMEARIAELEDRLESEERDRANLQLSNRRLERKVKELVMQVDDEHLSLTDQKDQLS-- 1205

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                  L   +R V ++  E+      +K + R + E  D  N      L  + +DL 
Sbjct: 1206 ----LRLKAMKRQVEEAEEEIDRLESSKKKLQRELEEQMD-MNEHLQGQLNSMKKDLR 1258



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 65/160 (40%), Gaps = 3/160 (1%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +Q L       +    ++NY       +      ++  ++     L+++++      +  
Sbjct: 543 QQELTQQTNEETAKQILYNYLKEGSTDNDDATKRKVNLVFEKIQTLKSRAAGSAQGNNQA 602

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
               + +K+L E+ +    ++ + +R + +  ++ ++NI E++  +R   E     + E 
Sbjct: 603 CNSTSEVKDLLEQKSKLTIEVAELQRQL-QLEVKNQQNIKEERERMRANLEELRSQHNEK 661

Query: 256 ANYLKEISRDLEQNQRTFADEMSKL--TILEKTREQKTIL 293
                 + + LE+++      + +L    +E+ + Q  I 
Sbjct: 662 VEENSTLQQRLEESEGELRKNLEELFQVKMEREQHQTEIR 701


>gi|56707280|ref|YP_169176.1| RND efflux transporter [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110669750|ref|YP_666307.1| RND efflux transporter [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224456344|ref|ZP_03664817.1| RND efflux transporter [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254369962|ref|ZP_04985970.1| efflux protein [Francisella tularensis subsp. tularensis FSC033]
 gi|254874118|ref|ZP_05246828.1| efflux protein [Francisella tularensis subsp. tularensis MA00-2987]
 gi|54113987|gb|AAV29627.1| NT02FT0847 [synthetic construct]
 gi|56603772|emb|CAG44739.1| Efflux protein, RND family, MFP subunit [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110320083|emb|CAL08122.1| Efflux protein, RND family, MFP subunit [Francisella tularensis
           subsp. tularensis FSC198]
 gi|151568208|gb|EDN33862.1| efflux protein [Francisella tularensis subsp. tularensis FSC033]
 gi|254840117|gb|EET18553.1| efflux protein [Francisella tularensis subsp. tularensis MA00-2987]
 gi|282158398|gb|ADA77789.1| Efflux protein, RND family, MFP subunit [Francisella tularensis
           subsp. tularensis NE061598]
          Length = 457

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/170 (11%), Positives = 59/170 (34%), Gaps = 30/170 (17%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSIL----------LPIEISVSSSGEIL------ 51
            LK    AS+  + + ++I   G+ +++              +   V+ +  ++      
Sbjct: 61  KLKDKKTASIA-IVVATLILFGGIFSFAEFIQSMIKKGMAAYVPQPVAVTSSVVEKTDWK 119

Query: 52  ----NEDNVVEIKS-----PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
                      ++S        GI+ +   ++G ++ +G  L   +  +    ++    +
Sbjct: 120 QVINTIGEAQAVQSTAISSQSGGIVSEIHFKSGQEVKKGDLLFKLDTSQLKANLEEALSN 179

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +K  +      K   + L  +    +++ +      L  L +  +  S++
Sbjct: 180 LKLAK----ITKDRYNKLVEQKATSKESADKANADYLSALAQVQNIESQI 225



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 71/202 (35%), Gaps = 25/202 (12%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S  ++ + + +    T +L+ N+ E  + L  + ++  +   +            ++   
Sbjct: 151 SGQEVKKGDLLFKLDTSQLKANLEEALSNL-KLAKITKDRYNKLVEQKATSKESADKANA 209

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLT 328
            +   ++++  +E     K + +P  G I   ++ S   Y         L  I       
Sbjct: 210 DYLSALAQVQNIESQIGFKEVRTPFDGKI-GIRNISLGQYFNNGDNAATLTTI----DPI 264

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQEYY 387
           +I   V   ++  +  G    + F  Y+D    + F   I  I+  I+  + ++  Q  Y
Sbjct: 265 FITFPVPQNKVSMISVGQ--EINF--YSDSYPGETFTGKITAINSFINDSNRSITVQATY 320

Query: 388 EVILKITDLAFSDNNIELRNGF 409
                      ++ + ++  G 
Sbjct: 321 -----------ANPHHKIVAGM 331


>gi|254249990|ref|ZP_04943310.1| Multidrug resistance efflux pump [Burkholderia cenocepacia PC184]
 gi|124876491|gb|EAY66481.1| Multidrug resistance efflux pump [Burkholderia cenocepacia PC184]
          Length = 193

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++  +  +  ++ TI++P+ GT+   ++           PLM IV   K  ++ A     
Sbjct: 5   AQFKLAYRNLKRTTIVAPVDGTV-GQRAVQVGQQVGPGVPLMSIV-QLKRLWVEANFKEG 62

Query: 338 QIQHVKKGYTATVRFPHYADI 358
           QI+H++ G    +    Y   
Sbjct: 63  QIRHMRVGQPVEIVSDIYGAR 83


>gi|189347493|ref|YP_001944022.1| efflux transporter, RND family, MFP subunit [Chlorobium limicola
           DSM 245]
 gi|189341640|gb|ACD91043.1| efflux transporter, RND family, MFP subunit [Chlorobium limicola
           DSM 245]
          Length = 361

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 64/170 (37%), Gaps = 18/170 (10%)

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L +  ++ +Q +     +  +L I E   ++ T+ +P  G ++  QS  + +Y   +
Sbjct: 135 RQDLDDAEKNRKQAEELLEQKRLRLKIQEDELKKLTVTAPFDG-VLALQSLKTGDYVTAN 193

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             + +++  +    +  ++    +  ++ G  A + F     + EK+F AI+ +I P   
Sbjct: 194 TLVARVI-DTSGYVVNVEIDELDVPRIRPGQKAVIVFDA---MPEKRFDAIVSRIVPQTD 249

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT--AKNTTLA 423
                 +    +   ++            ++ G  A        ++  L 
Sbjct: 250 TVTKTSKVYLQFTAPIQ-----------AVQAGMTATANIIYNTRSRALL 288



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 42/130 (32%), Gaps = 3/130 (2%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               +  +V ++G +  +  V  + +  SG ++      G ++  G  ++T +  +    
Sbjct: 41  TYAELVQAVYATGFVEADA-VANLSAELSGTVRSVGALEGERVSAGQTIITLDSPQPELA 99

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   + +       +   K  L  +  +    E A   ++    +   K      +    
Sbjct: 100 VREARAAYDEQLALVVGTK--LKCIRARNLFGEGAVSRQDLDDAEKNRKQAEELLEQKRL 157

Query: 156 GISSVYRSLK 165
            +      LK
Sbjct: 158 RLKIQEDELK 167


>gi|119504218|ref|ZP_01626298.1| Secretion protein HlyD [marine gamma proteobacterium HTCC2080]
 gi|119459726|gb|EAW40821.1| Secretion protein HlyD [marine gamma proteobacterium HTCC2080]
          Length = 405

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/214 (11%), Positives = 60/214 (28%), Gaps = 18/214 (8%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q D                + + E++   R     + E     AN L      ++  +  
Sbjct: 120 QADYEFAIARAQSQVAAAEQRLAEERGRNRQAKREWRELGTVEANALFLRQPQMKAAEAA 179

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI---------VP 323
               ++ L+  +    +  I +P +G I   ++     Y      + +I         +P
Sbjct: 180 LKASVADLSAAQLALSRTEIRAPFSGRIESKRAD-LGQYIAPGVAVAEIYATDIVDVALP 238

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            +       K+      +V  G    +    +      +++A I ++  ++ +Q   +  
Sbjct: 239 LNDSQLAALKLPMN--ANVALGIPVILS-TAFGGREW-QWQAQIRRVQAVVDRQSRTVNA 294

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                  +     +       L  G         
Sbjct: 295 ----IAEVLQPFESEVSGRPPLTPGMFVRAEIPT 324


>gi|156744270|ref|YP_001434399.1| H+transporting two-sector ATPase delta/subunit epsilon [Roseiflexus
           castenholzii DSM 13941]
 gi|156235598|gb|ABU60381.1| H+transporting two-sector ATPase delta/epsilon subunit [Roseiflexus
           castenholzii DSM 13941]
          Length = 514

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/399 (12%), Positives = 128/399 (32%), Gaps = 66/399 (16%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V+    + +G  L   E  +  + +   +V+++  +  ++  K+  D    + 
Sbjct: 79  GFLKVLYVDRNDPVTKGQLLAELEMGDLPNQLRQAEVALEQAQLVLNRSKAQRDAAIRRA 138

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++  +  +++  +L +         ++       +    ++   +  ++     + L   
Sbjct: 139 ELDLEEAQAQLRRLQEPPEPLDVARAQANLAQAQANLEQVRTNASAEKT--RAEMALAQA 196

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQN-DLNQQERIVYKSTLELRENIHEQKNMLRH 243
           S+ L A+ +++ + LT   ++ +K    Q+   N  +    ++  ELR      +     
Sbjct: 197 SNALPAIQTAYLRALTEWNDVKDK---PQDWRYNAVKEAFERAEAELRNAEMAVRQAQLA 253

Query: 244 INELYD-----------------------------------EANLEFANYLKEISRDLEQ 268
            ++                                        N+E A    E ++ +  
Sbjct: 254 YDQARQNEGPAIARAEALLAEAQAAYDALTRGPKPEDLARARRNVERAQIAVEEAKQIGD 313

Query: 269 NQRTFADEMSKLTI--LEKTREQKTILSPIAGTIV------YNQSFSSSNYAQQSQPLMK 320
           ++       ++L +  L+   E   + +P  G +        +Q  +          +M 
Sbjct: 314 SELEGRVAAAQLEVERLKTQMEAMRLYAPFNGKVAAVGNKPGDQITAYRAVI----TVMD 369

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
                K   +   V  +    +  G    + F        K F  ++ K+   ++     
Sbjct: 370 --DTEKELLVE-NVASQDASRIGLGQQVQITFS---RAPGKVFDGVVTKLPTTLTSSAAT 423

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +     Y        + F    ++L  G  A+V+ T K 
Sbjct: 424 INPDRAY-------HIDFQAPGVDLEVGDLAQVVITLKR 455


>gi|113955526|ref|YP_730861.1| ABC transporter [Synechococcus sp. CC9311]
 gi|113882877|gb|ABI47835.1| possible ABC transporter component [Synechococcus sp. CC9311]
          Length = 300

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 7/163 (4%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINE--LYDEANLEFANYLKEISRDLEQNQRTFAD 275
           Q E  + +   +++    E +   R ++      +         +E   +L + QR   +
Sbjct: 99  QIEAEIAEVDAQIQSAAIEVELQQREVSRYAAAAKVGAAAMVAYEEKQDELRRFQREGVE 158

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            ++K   LE    +  +LSP+ GT+   +  S       S  +M+ V  S+      +V 
Sbjct: 159 LIAKRRSLETDLAESELLSPVNGTV--LKIHSRVGERPSSDGVME-VGASQSMEALVEVY 215

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
              I  +  G   T          +   +  +E+I P + Q+ 
Sbjct: 216 ESDINRISIGQPVT--LTSENGGFQGTLEGRVERITPQVRQRQ 256



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 82/258 (31%), Gaps = 11/258 (4%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSG-----IIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
            +V++ G++     V  + +P SG      I    V  G QI +G PL  F+        
Sbjct: 44  EAVAALGQLKPAGEVRRLAAPVSGFGGTPRILALLVNEGDQIRKGQPLAIFDS-RPQIEA 102

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNN-----KYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           ++ +V  +     I+ E    +                A+E ++++L  F  +     +K
Sbjct: 103 EIAEVDAQIQSAAIEVELQQREVSRYAAAAKVGAAAMVAYEEKQDELRRFQREGVELIAK 162

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             +         L   +        +R+     S  +  + +S   +  +     + N +
Sbjct: 163 RRSLETDLAESELLSPVNGTVLKIHSRVGERPSSDGVMEVGASQSMEALVEVYESDINRI 222

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S                 L   +      +R    L  +   +    + E+   L     
Sbjct: 223 SIGQPVTLTSENGGFQGTLEGRVERITPQVRQRQVLSTDPTGDADARIIEVDVVLSPESA 282

Query: 272 TFADEMSKLTILEKTREQ 289
               ++S L ++ + + +
Sbjct: 283 QRVTQLSGLKVIARFKSR 300


>gi|85089553|ref|XP_958002.1| hypothetical protein NCU06935 [Neurospora crassa OR74A]
 gi|28919305|gb|EAA28766.1| predicted protein [Neurospora crassa OR74A]
          Length = 1347

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 73/206 (35%), Gaps = 5/206 (2%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +   D  T       +   +  +  ++  K   +    + +  ++  E R++       +
Sbjct: 444 IRLLDERTQKQAQEHRKQAEAQKQAVEARKRFEE--QKRLEEQKRLAEERKKAEAQKRCE 501

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                ++       +  R  + K    +     +  LE +  L        QK +   K 
Sbjct: 502 EERKQAEARKQAEEARKRIEEQKRLEEQKKLEEQKRLEEQKKLEEQKRIEEQKRIEEQKK 561

Query: 205 LFE-KNAVSQNDLNQQERIVYKSTLELRENIHEQKNML--RHINELYDEANLEFANYLKE 261
           L E K    Q  + +Q+RI  +  LE ++ + EQK +   R   +   +A  +     + 
Sbjct: 562 LEEQKKLEEQKRIEEQKRIEEQKKLEEQKKLEEQKRLEEERQQAQARKQAEDQKRFEEER 621

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTR 287
              + EQ +     E +++ I E+ R
Sbjct: 622 KRAEAEQAEAKKKAEEARVRIEEQKR 647



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 14/206 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              ++L+K+  + LR  ++ E      L     + ++  E ++        +      + 
Sbjct: 383 ERRLELQKLEQEKLR--LERELQEHQEL-----LEKQRLEQQKLDQQKLQEQARPKECRS 435

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            +       R L  +  +    +  + + + ++   R      QK L   K L E+   +
Sbjct: 436 LDEQQGERIRLLDERTQKQAQEHRKQAEAQKQAVEARKRFEE-QKRLEEQKRLAEERKKA 494

Query: 213 QN----DLNQQERIVYKSTLELRENIHEQKNMLRH--INELYDEANLEFANYLKEISRDL 266
           +     +  +++    K   E R+ I EQK +     + E       +     K I    
Sbjct: 495 EAQKRCEEERKQAEARKQAEEARKRIEEQKRLEEQKKLEEQKRLEEQKKLEEQKRIEEQK 554

Query: 267 EQNQRTFADEMSKLTILEKTREQKTI 292
              ++   +E  KL   ++  EQK I
Sbjct: 555 RIEEQKKLEEQKKLEEQKRIEEQKRI 580



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/173 (12%), Positives = 53/173 (30%), Gaps = 8/173 (4%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                   F            +      +  +       + ++ +  R R +   RL+ +
Sbjct: 320 PRSEEAFLFRPPTAPRAQSQLERQHGHDQQRSDQQRLRQQQMENQKLRQRQVEEERLEAQ 379

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                   L    Q+ L + + L E       +L +++R+  +   + +     +    R
Sbjct: 380 KIKERRLELQKLEQEKLRLERELQE-----HQELLEKQRLEQQKLDQQKLQEQARPKECR 434

Query: 243 HINELYDEANL---EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            ++E   E      E      +  R   + Q+   +   +    ++  EQK +
Sbjct: 435 SLDEQQGERIRLLDERTQKQAQEHRKQAEAQKQAVEARKRFEEQKRLEEQKRL 487



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 66/222 (29%), Gaps = 16/222 (7%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             E     +  +  I+  +   + +K        +   LE+     E++ ++   K    
Sbjct: 506 QAEARKQAEEARKRIEEQKRLEEQKKLEEQKRLEEQKKLEEQKRIEEQKRIEEQKKLEEQ 565

Query: 149 CSKVFNYGISSVYR--SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK-------DL 199
                   I    R    K    + +     RL+ E + +  R      ++         
Sbjct: 566 KKLEEQKRIEEQKRIEEQKKLEEQKKLEEQKRLEEERQQAQARKQAEDQKRFEEERKRAE 625

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--EFAN 257
                  +K   ++  + +Q+R+  +  LE      E +  +       +E     E   
Sbjct: 626 AEQAEAKKKAEEARVRIEEQKRLEEQKALEEERKRVETQKQVEAQKRFEEERKQAEEARK 685

Query: 258 YLKEISR-----DLEQNQRTFADEMSKLTILEKTREQKTILS 294
            L+E  +        + +R   +   +L       E+  + +
Sbjct: 686 RLEEERKHAEIKKRREEERKETEAQQRLEQKRLDEERNQVEA 727


>gi|312171268|emb|CBX79527.1| putative multidrug efflux system inner membrane protein [Erwinia
           amylovora ATCC BAA-2158]
          Length = 421

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 60/165 (36%), Gaps = 4/165 (2%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  + + +++ G ++    V  + S  SG +     + G ++  G  L   +       +
Sbjct: 84  LADVPVYLTALGTVIPNATV-TVTSQVSGTLTHVYFKEGEKVAAGQLLAQIDPRSYQATL 142

Query: 97  DLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              + ++   +  + + +  L     L  +  +  +  E++   +  +LG   +  +++ 
Sbjct: 143 AQYQGNLSQNQALLKSAQLTLARYQKLYARDLLARQDLETQTATVGQYLGAVTADQAQIA 202

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              ++  +  +   ++    + L       +SS    ++   Q  
Sbjct: 203 AAKLNIEFARITAPISGRVGLRLVDAGNRIQSSDTTGIVVITQTQ 247



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 24/170 (14%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ-------------RTFADEM 277
           +  + + +  L     L   A L  A Y K  +RDL   Q                  + 
Sbjct: 139 QATLAQYQGNLSQNQALLKSAQLTLARYQKLYARDLLARQDLETQTATVGQYLGAVTADQ 198

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVT 335
           +++   +   E   I +PI+G +   +   + N  Q S    ++ I   ++   +   V 
Sbjct: 199 AQIAAAKLNIEFARITAPISGRV-GLRLVDAGNRIQSSDTTGIVVIT-QTQPAAVTFSVP 256

Query: 336 ----PKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDPIISQQDNN 380
               P  ++ +  G    +    +         +  ++ I   I     +
Sbjct: 257 QSNIPTLLKALHNGQP--LPATAFDQAGSTSLAQGEVQFISNQIDTSTGS 304


>gi|254714536|ref|ZP_05176347.1| efflux transporter, RND family, MFP subunit [Brucella ceti
           M644/93/1]
 gi|254717434|ref|ZP_05179245.1| efflux transporter, RND family, MFP subunit [Brucella ceti
           M13/05/1]
 gi|261219266|ref|ZP_05933547.1| efflux transporter [Brucella ceti M13/05/1]
 gi|261322327|ref|ZP_05961524.1| efflux transporter [Brucella ceti M644/93/1]
 gi|260924355|gb|EEX90923.1| efflux transporter [Brucella ceti M13/05/1]
 gi|261295017|gb|EEX98513.1| efflux transporter [Brucella ceti M644/93/1]
          Length = 408

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 70/209 (33%), Gaps = 15/209 (7%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q D  + + +   + L L++    ++  L     +      +    L     +++     
Sbjct: 128 QLDNLKAQLLSKDAQLTLKKLNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNAQ 187

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TYI 330
              + ++L   +      +I SP+ GT+V   +          Q    IV  + L    +
Sbjct: 188 IRQQEAQLASDKVDLGYTSIYSPMEGTVVDEAA-KEGETLNAVQSAPTIVTVADLKVMTV 246

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A+V+   I  +K G      F        K+F   + +I P  +  +N +    YY + 
Sbjct: 247 EAQVSEADISKLKPGMPVY--FTLLGQPD-KRFTGTLRQIKPTPATDNNVVL---YYALF 300

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                    +   EL     A+V F    
Sbjct: 301 ------DVPNPTGELMIDMSAQVYFVLGE 323



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 68/193 (35%), Gaps = 29/193 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW-------------SILLP------IEISVSSS 47
            + ++      +    LS   II    W             S L        IE ++++ 
Sbjct: 15  ASARKRAKGKRRWWLWLSAAAIIIGAGWYFYGSYKADGEKSSYLAETVTRGDIENAITAV 74

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G + +    V + +  SG +K  +VE G  + QG  +   +       +++    + NL+
Sbjct: 75  GTL-SALRSVNVGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIAGTQLDNLK 133

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             + ++ + L         L+K   +R++ LL   G   +T  +  N  +      +K  
Sbjct: 134 AQLLSKDAQL--------TLKKLNAARQKSLLATRGVSQATVDQA-NADLLMAEAEVKAL 184

Query: 168 LTRMRSIYLNRLD 180
             ++R        
Sbjct: 185 NAQIRQQEAQLAS 197


>gi|168819929|ref|ZP_02831929.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|238913421|ref|ZP_04657258.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|205343195|gb|EDZ29959.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320085178|emb|CBY94965.1| Macrolide-specific efflux protein macA Flags: Precursor [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           2007-60-3289-1]
          Length = 372

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  +      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKINDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 66/174 (37%), Gaps = 17/174 (9%)

Query: 18  KRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+  W +L                +E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMAGWRMLNAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G  + +   L   +  +  + I   + ++  L    + +++A +    +
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNA--ERQQAAAELKLAR 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +   ++ + +        +T   V    I ++   +K     + +   N
Sbjct: 128 VTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTN 181


>gi|84060732|ref|YP_444078.1| hypothetical protein O2ColV32 [Escherichia coli]
 gi|83743322|gb|ABA54760.2| hypothetical protein O2ColV32 [Escherichia coli]
          Length = 395

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 80/278 (28%), Gaps = 34/278 (12%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK--NAVSQNDLNQQERIVYK 225
           L   R   + R+++  + S     L   Q D      L  +  +   +NDL   E  + +
Sbjct: 52  LATGRIDAIERVNVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQRNDLRNAEAALNE 111

Query: 226 STLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              EL+      K               N       +     L   +       +KL   
Sbjct: 112 VKAELQSKQALLKQAELRFKRQLRMLRENASSHEDFESAEAMLATTRAELLSLNAKLVQA 171

Query: 284 EKT-------REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKV 334
           +          E   +++P+ G ++             +Q    I+  +   +  I+A++
Sbjct: 172 QIEVDKKKLALEYTRVVAPMDGIVIAI-VTQQGQTVNSNQSAPTIIKLARLDVMTIKAQI 230

Query: 335 TPKQIQHVKKGYTATVRFPHY--ADIREKKFKAIIEKIDPIISQQDNNLQTQE------- 385
           +   I  +  G  A  RF  +   D         +E     + + D+             
Sbjct: 231 SEADITRISVGQKA--RFSIFSEPDKHYSATLRAVELAPESVMKDDSLASNSSASGSGTS 288

Query: 386 ----YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               YY  +  + +     N + +     A+V      
Sbjct: 289 NASVYYNALFDVPNPE---NRLRIA--MTAQVTLITDE 321



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 61/142 (42%), Gaps = 11/142 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G I   + V  + +  SG +K  +V+ G  + +G  +   +D+   + +   
Sbjct: 47  IENSVLATGRIDAIERV-NVGAQVSGQLKSLKVKQGDHVTKGQLIAEIDDLPQRNDLRNA 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVL----------EKAFESREEQLLDFLGKYHSTC 149
           + ++  ++  + ++++ L     ++              + FES E  L     +  S  
Sbjct: 106 EAALNEVKAELQSKQALLKQAELRFKRQLRMLRENASSHEDFESAEAMLATTRAELLSLN 165

Query: 150 SKVFNYGISSVYRSLKMKLTRM 171
           +K+    I    + L ++ TR+
Sbjct: 166 AKLVQAQIEVDKKKLALEYTRV 187


>gi|21231587|ref|NP_637504.1| cation efflux system protein [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768291|ref|YP_243053.1| cation efflux system protein [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21113275|gb|AAM41428.1| cation efflux system protein [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66573623|gb|AAY49033.1| cation efflux system protein [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 371

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 17/177 (9%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + + +  LR +   Y  A       L     D++Q +    +  ++  +        T+
Sbjct: 108 AVAQSEAQLRKLENSYRRATQLVGQQLVSA-ADVDQLKFDVENSRAQHRLASLELSYTTV 166

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +PI+G I      +  N+ Q + P+ +IV           V  +++  +K G   T+  
Sbjct: 167 QAPISGVIASRSIKT-GNFVQINTPIFRIV-DDSQLEATLNVPERELATLKSGQPVTLLA 224

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                   ++F   +++I P++            + V+      AF      L+ G 
Sbjct: 225 DALP---GQQFVGKVDRIAPVVDSGSGT------FRVV-----CAFGAGAEALQPGM 267



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 4/161 (2%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  +        + +  SG+     VE G ++  G  L+  +       +   +  ++
Sbjct: 59  TGTAALEPRAEAQVV-AKTSGVALAVMVEEGQKVSAGQALVRLDPDRAHLAVAQSEAQLR 117

Query: 105 NLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            L   +    +     L +  DV +  F+    +    L     + + V    IS V  S
Sbjct: 118 KLENSYRRATQLVGQQLVSAADVDQLKFDVENSRAQHRLASLELSYTTV-QAPISGVIAS 176

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +K      I      + +  S L A L+  +++L  +K+
Sbjct: 177 RSIKTGNFVQINTPIFRIVDD-SQLEATLNVPERELATLKS 216


>gi|219670523|ref|YP_002460958.1| efflux transporter RND family, MFP subunit [Desulfitobacterium
           hafniense DCB-2]
 gi|219540783|gb|ACL22522.1| efflux transporter, RND family, MFP subunit [Desulfitobacterium
           hafniense DCB-2]
          Length = 379

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/328 (12%), Positives = 92/328 (28%), Gaps = 52/328 (15%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                +++ S   +       K+ ++ +     V+     S   ++   +   +      
Sbjct: 27  AAQAVVEEESYIPVEVQPAAAKTLVETVVFSGKVISDQEVSIVPKMPGKVTNINVKVGDT 86

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
              G              + +  +     E    + +  L S +++L   + L+E  A+S
Sbjct: 87  VQAGQVLFTMDTVDLQKSVDTAAIAVKSAELSYQMTKDSLDSAKENLERQRALYEAGAIS 146

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +      E  V      L+    + +      N+                          
Sbjct: 147 KVQFEGIEDQVTSLENNLKAVQLQVEQAQLGYNQ-------------------------- 180

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                             T+ +P++GT+           A Q+   + +       Y+  
Sbjct: 181 ----------AHDAISDMTVTAPVSGTVAALNVV-VGQMASQATAAVTVT-QLDALYVSL 228

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V    +  +K G  ATV         +K+ K ++  + P  +QQ         Y V + 
Sbjct: 229 SVPENIVNTLKVGQEATVII---NSAGQKEIKGVLTSLAPAANQQLGL------YPVKVT 279

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           I +         ++ G  A+V       
Sbjct: 280 IENTENL-----VKPGMFAKVEIPTATK 302



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 52/147 (35%), Gaps = 3/147 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    +  +V  SG+++++  V  +     G +    V+ G  +  G  L T + ++   
Sbjct: 45  AAAKTLVETVVFSGKVISDQEVSIV-PKMPGKVTNINVKVGDTVQAGQVLFTMDTVDLQK 103

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +D   +++K+        K +LD      +     +E+     + F G      S    
Sbjct: 104 SVDTAAIAVKSAELSYQMTKDSLDSAKENLERQRALYEAGAISKVQFEGIEDQVTS--LE 161

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDL 181
             + +V   ++         +    D+
Sbjct: 162 NNLKAVQLQVEQAQLGYNQAHDAISDM 188


>gi|332827793|gb|EGK00528.1| hypothetical protein HMPREF9455_03171 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 414

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 101/278 (36%), Gaps = 25/278 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE----DIETTDL 95
           IE++V++SG+++     + + SP +  I +     G  +L G P+L  E    + +    
Sbjct: 58  IEVTVNASGKVIPLTEEIIV-SPINSRILEVYKNAGDSVLSGEPILKLELASVETDYNQK 116

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +D K++    L     T ++ +  L  +  V +   +  + +L +         S     
Sbjct: 117 LDEKEMKASKLIQSKITLENRISELQMQMQVKDMNLKQMQTELKNEQYLDSIGASTTDKV 176

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             +++   +     +          L+ +    +   S+  K   +  ++FEK+      
Sbjct: 177 RQAALNYEVAKLELQQ---------LKQQIENQKKNASAETKVQELEISIFEKSLAESAR 227

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L +  RI+      L    ++  + +    ++   ++L       +I+    +   T A 
Sbjct: 228 LLKDARILSPQKATLTYVNNQIGSQVSAGTQIAIISDLSHFKVEADIADSYAEKLSTGAK 287

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
            + K+  L+           + GT+V       +   Q
Sbjct: 288 AIIKIGQLQ-----------LEGTVVNITPSVKNGVIQ 314


>gi|299139318|ref|ZP_07032493.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX8]
 gi|298598587|gb|EFI54750.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX8]
          Length = 407

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 55/177 (31%), Gaps = 22/177 (12%)

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
              +LE A  L      L    +T +   S+L+      +  +I +P AG I    + + 
Sbjct: 161 QSRDLEAAAQLAGAQSALNAALQTKSQAESELSRTNAMLQYASIRAPFAGVITKRYANT- 219

Query: 309 SNYAQQS----QPLMKIV--PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  Q         M +V    + L  +   V    +  +  G    V         + K
Sbjct: 220 GSMIQAGISSQTQAMPVVRLAENSLLRLMLPVPVNAVAEIHDGQPVDVNVVTLGRTIKGK 279

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                  I         + +T E        T++   + + +L  G  AEV     +
Sbjct: 280 -------ITRYADSLQASTRTME--------TEVDVPNPDGKLVPGMYAEVHLHLAD 321



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 58/176 (32%), Gaps = 10/176 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K  +V+ G  + QG  L T E  E  D +      +   + ++ T + A+     + 
Sbjct: 72  GYVKNIRVDIGDHVRQGDLLATLEVPELQDEMAKANAGVAAAQANVVTARGAIQRAQAEA 131

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++   +F+  ++ L    G        V           L    + + +    +   E++
Sbjct: 132 NITHLSFQRIQDVLTREPGLVPRQEVDVAQSRDLEAAAQLAGAQSALNAALQTKSQAESE 191

Query: 185 SSLLRALLSSHQ----------KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
            S   A+L              K      ++ +    SQ       R+   S L L
Sbjct: 192 LSRTNAMLQYASIRAPFAGVITKRYANTGSMIQAGISSQTQAMPVVRLAENSLLRL 247


>gi|281423706|ref|ZP_06254619.1| immunodominant surface protein repeat-containing domain protein
           [Prevotella oris F0302]
 gi|281402258|gb|EFB33089.1| immunodominant surface protein repeat-containing domain protein
           [Prevotella oris F0302]
          Length = 399

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 5/64 (7%)

Query: 56  VVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +  I+        SG I +  V  G  +  G PL + +       +   + S+   R  +
Sbjct: 53  IKGIQDVEVRPKVSGFITRVYVHEGQVVKAGQPLFSIDSETYQAAVRQAQASVNTARAQL 112

Query: 111 DTEK 114
           +T +
Sbjct: 113 NTAR 116


>gi|209965345|ref|YP_002298260.1| HlyD family secretion protein [Rhodospirillum centenum SW]
 gi|209958811|gb|ACI99447.1| HlyD family secretion protein [Rhodospirillum centenum SW]
          Length = 350

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 41/138 (29%), Gaps = 4/138 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E   + + +P  G +    V  G +++ G PL   ED +    +   K  +      + 
Sbjct: 36  VEGQYLRMAAPEGGWLVDLAVAEGDRVVPGQPLFALEDTQQQAALAEAKGRLAQAMAQLA 95

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +  L       ++       R+ + L           +       +    L +  +  
Sbjct: 96  DLRLGL----RPEEIARIEARLRQAEALATYTAAELRRQQDLASRDVAARARLDLARSDA 151

Query: 172 RSIYLNRLDLENKSSLLR 189
           R        ++ + +  R
Sbjct: 152 RQAEAEVAAVKAELATAR 169


>gi|197250906|ref|YP_002145858.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197214609|gb|ACH52006.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
          Length = 372

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  +      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKINDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 66/174 (37%), Gaps = 17/174 (9%)

Query: 18  KRMTLLSIIGIIGLITW-SILLPI-------------EISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+  W  I  P+             E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMAGWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G  + +   L   +  +  + I   + ++  L    + +++A +    +
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNA--ERQQAAAELKLAR 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +   ++ + +        +T   V    I ++   +K     + +   N
Sbjct: 128 VTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTN 181


>gi|168236851|ref|ZP_02661909.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194738152|ref|YP_002113998.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|204929863|ref|ZP_03220884.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|194713654|gb|ACF92875.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197290139|gb|EDY29496.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|204320857|gb|EDZ06058.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 372

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  +      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKVNDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 68/174 (39%), Gaps = 17/174 (9%)

Query: 18  KRMTLLSIIGIIGLITW-SILLPI-------------EISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+++W  I  P+             E SV ++G++     V ++ +  
Sbjct: 11  RYLAIILILLVGGMVSWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G  + +   L   +  +  + I   + ++  L    + +++A +    +
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNA--ERQQAAAELKLAR 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +   ++ + +        +T   V    I ++   +K     + +   N
Sbjct: 128 VTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTN 181


>gi|34558839|gb|AAQ75183.1| AcrA/AcrE family protein VCA0639 [Alvinella pompejana epibiont 7G3]
          Length = 264

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 48/131 (36%), Gaps = 3/131 (2%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG ++  DN   I S + GI+KK  V  G  + +G  L   +  E     +  ++ I   
Sbjct: 23  SGSVI-SDNQKMITSRYMGIVKKMLVSEGDIVKKGQLLYVIDSKEIDAKKEQVELGISQA 81

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              +   K+ L+ +       E+ +  R+  +  +  +     +K     +    + ++ 
Sbjct: 82  ELALQMNKNQLNNVLLNLGRYERLY--RKGMVSKYELENLQLAAKNLRDMVKISEKQVEQ 139

Query: 167 KLTRMRSIYLN 177
                + +   
Sbjct: 140 AKAMKKEVMNQ 150



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 86/246 (34%), Gaps = 24/246 (9%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           ++ + ++  D+  K  LL        K++   K   E   +SQ +L  Q      + + L
Sbjct: 42  VKKMLVSEGDIVKKGQLL---YVIDSKEIDAKKEQVELG-ISQAELALQMNKNQLNNVLL 97

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
               +E+      +++   E     A  L+++ + + + Q   A  M K   +       
Sbjct: 98  NLGRYERLYRKGMVSKYELENLQLAAKNLRDMVK-ISEKQVEQAKAMKK--EVMNQYNYL 154

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P  G I+  +  +    +    P + I+       I  ++    I+++  G    +
Sbjct: 155 KLRAPNNGVIIAKRLNT-GEMSIPGMPGV-ILTDLSKLSIMVEIAEDDIKYMNLGKKVNI 212

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           + P        K  +II   +P+  +          +++ ++     F+     +  G  
Sbjct: 213 KIPSIGLDTVGKIYSIIPSSNPMTHK----------FKMKIQ-----FNSKGKPVYPGMY 257

Query: 411 AEVLFT 416
             V   
Sbjct: 258 VNVHIK 263


>gi|289678865|ref|ZP_06499755.1| secretion protein HlyD [Pseudomonas syringae pv. syringae FF5]
          Length = 294

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 70/224 (31%), Gaps = 21/224 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q+      R    +  E +E   + +   +         NL     L+E      +  
Sbjct: 78  IDQDRFRLALRQAQATVAERQETWEQTRRENKR---NRGLGNLVAREQLEESQSREARAL 134

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +    +   +   ++  I SP+ G  + +++     +    +P++ +V  S   +I
Sbjct: 135 SALGESKVAVDAAQLNLDRSVIRSPVDGY-LNDRAPREHEFVTAGRPVLSVV-DSTSFHI 192

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQDN 379
                  ++  +  G    +R             +I+  I+           P ++   +
Sbjct: 193 DGYFEETKLDGIHVGQGVDIRVIGDNARLTGHVVSIVAGIEDRDRSSGSNLLPNVNPAFS 252

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT--AKNTT 421
            ++  +   V +   D+     +  +  G  A V      +  +
Sbjct: 253 WVRLAQRIPVRIAFDDV---PADFRMIAGRTATVSIIDDTQERS 293



 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++V+I    SG+I+K +V +   + +G  L T +       +   + ++   +   +  +
Sbjct: 46  DIVQIAPDVSGLIQKVEVTDNQPVHKGQVLFTIDQDRFRLALRQAQATVAERQETWEQTR 105

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                     +++ +      EQL +   +     S +    ++     L +  + +RS
Sbjct: 106 RENKRNRGLGNLVAR------EQLEESQSREARALSALGESKVAVDAAQLNLDRSVIRS 158


>gi|284039394|ref|YP_003389324.1| secretion protein HlyD [Spirosoma linguale DSM 74]
 gi|283818687|gb|ADB40525.1| secretion protein HlyD family protein [Spirosoma linguale DSM 74]
          Length = 335

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 53/143 (37%), Gaps = 2/143 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V     I     + ++ +   G++K   V+ G Q+ +G  LLT ++   +  +    V +
Sbjct: 63  VLGVAVIEPTARISKLAAETDGLVKTVNVDIGQQVKKGQVLLTMDNAVESAQLQQATVKM 122

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           K  +  I+T +  +  L  +    E   + R E L                Y + ++ + 
Sbjct: 123 KTQQDAIETARQNVQTLRVQLQKAEADLK-RNETLFAGNALTRKELDDS-RYDVQNLQQQ 180

Query: 164 LKMKLTRMRSIYLNRLDLENKSS 186
           ++    +++       +L   S 
Sbjct: 181 IRASEAQVKQAQGRIAELRADSE 203



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 82/290 (28%), Gaps = 44/290 (15%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +  +  +       + +  R   +    A+     +   L    +   + +   +G+   
Sbjct: 39  DKKQKAEAQQDSVRTAQTARQIAEVLGVAVIEPTARISKLAAETDGLVKTVNVDIGQQVK 98

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +     +     L+    +M++              LR  L   + DL   + LF 
Sbjct: 99  KGQVLLTMDNAVESAQLQQATVKMKTQQDAIETARQNVQTLRVQLQKAEADLKRNETLFA 158

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            NA+++ +L+     V     ++R +  + K                             
Sbjct: 159 GNALTRKELDDSRYDVQNLQQQIRASEAQVK----------------------------- 189

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q Q   A+  +           KT+ +P  GT++   +     Y   +Q +    P    
Sbjct: 190 QAQGRIAELRADSEYASTVAGLKTVKAPADGTLLSLDA-KIGQYLSSNQSIGDFAPAG-P 247

Query: 328 TYIRAKVTPKQIQ-----HVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                 V   +I       VK G  A +R    +D         +    P
Sbjct: 248 L-----VAVTEIDELFALKVKVGQKAYIRQQGSSDRLT---TGTVVLASP 289


>gi|254500503|ref|ZP_05112654.1| hypothetical protein SADFL11_539 [Labrenzia alexandrii DFL-11]
 gi|222436574|gb|EEE43253.1| hypothetical protein SADFL11_539 [Labrenzia alexandrii DFL-11]
          Length = 409

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 50/148 (33%), Gaps = 1/148 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V +   +  G P+   +        +  +  I  +   I   ++ L       
Sbjct: 83  GRVEEVYVADNQFVRAGEPIFRLDTQRQQAAAETSRRRIAEVEAAILVGQAELAAAEGNI 142

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E      ++ L   L       + V    +  +  +++     + +I   R   + +
Sbjct: 143 VASESQLRKAQDDLTRRLDLSERNQNVVTEQELERLRLTVEGLTGSLEAIKAQRDANQTR 202

Query: 185 SS-LLRALLSSHQKDLTMMKNLFEKNAV 211
              LL A  SS +  L+  +   EK+ V
Sbjct: 203 LRVLLPAQKSSAEAALSQAETEIEKSTV 230


>gi|16764303|ref|NP_459918.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161614829|ref|YP_001588794.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167992160|ref|ZP_02573258.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168240788|ref|ZP_02665720.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168263574|ref|ZP_02685547.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|194450430|ref|YP_002044934.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197265366|ref|ZP_03165440.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|200389979|ref|ZP_03216590.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|207856336|ref|YP_002242987.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|16419453|gb|AAL19877.1| putative membrane protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161364193|gb|ABX67961.1| hypothetical protein SPAB_02582 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194408734|gb|ACF68953.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197243621|gb|EDY26241.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|199602424|gb|EDZ00970.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205329673|gb|EDZ16437.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205340240|gb|EDZ27004.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205347738|gb|EDZ34369.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206708139|emb|CAR32432.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|267992668|gb|ACY87553.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157486|emb|CBW16976.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911931|dbj|BAJ35905.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223265|gb|EFX48334.1| Macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|323129208|gb|ADX16638.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|332987835|gb|AEF06818.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 372

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  +      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKINDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 66/174 (37%), Gaps = 17/174 (9%)

Query: 18  KRMTLLSIIGIIGLITW-SILLPI-------------EISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+  W  I  P+             E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMAGWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G  + +   L   +  +  + I   + ++  L    + +++A +    +
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNA--ERQQAAAELKLAR 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +   ++ + +        +T   V    I ++   +K     + +   N
Sbjct: 128 VTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTN 181


>gi|116052408|ref|YP_792719.1| putative membrane fusion protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218893465|ref|YP_002442334.1| putative Resistance-Nodulation-Cell Division (RND) efflux membrane
           fusion protein precursor [Pseudomonas aeruginosa LESB58]
 gi|254244816|ref|ZP_04938138.1| hypothetical protein PA2G_05688 [Pseudomonas aeruginosa 2192]
 gi|296391081|ref|ZP_06880556.1| putative Resistance-Nodulation-Cell Division (RND) efflux membrane
           fusion protein precursor [Pseudomonas aeruginosa PAb1]
 gi|115587629|gb|ABJ13644.1| putative membrane fusion protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126198194|gb|EAZ62257.1| hypothetical protein PA2G_05688 [Pseudomonas aeruginosa 2192]
 gi|218773693|emb|CAW29507.1| probable Resistance-Nodulation-Cell Division (RND) efflux membrane
           fusion protein precursor [Pseudomonas aeruginosa LESB58]
          Length = 376

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 68/210 (32%), Gaps = 27/210 (12%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L Q E  V ++TL   E                  +     +    ++    +   T A+
Sbjct: 97  LIQLESDVEEATLRTAEADLGLARAEYQRGRELIGSKAISKSEFDRLAAQWAKTSATVAE 156

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKV 334
             + L        +K +L+P AGTI   +     +Y     P+  +         +   +
Sbjct: 157 LKAALA-------KKRVLAPFAGTI-GIRQVDVGDYVSPGTPIATL--QDLSTLLLDFHL 206

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             +    + +G    VR   Y     + F A I  I+P +  +  NLQ            
Sbjct: 207 PEQDFPLLSRGQLVKVRVAAYP---GQVFDAEIAAINPKVDNETRNLQV----------- 252

Query: 395 DLAFSDNNIELRNGFPA--EVLFTAKNTTL 422
             A  + + +L  G  A  EV+   +   +
Sbjct: 253 RAALENPDGKLLPGMFANLEVMLPGEEQRV 282


>gi|332799450|ref|YP_004460949.1| RND family efflux transporter MFP subunit [Tepidanaerobacter sp.
           Re1]
 gi|332697185|gb|AEE91642.1| efflux transporter, RND family, MFP subunit [Tepidanaerobacter sp.
           Re1]
          Length = 574

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/398 (10%), Positives = 118/398 (29%), Gaps = 65/398 (16%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNK 123
           +   E G+++  G  +      E    I   +  +++ +  +        +   +   ++
Sbjct: 89  EILAEEGTEVKMGQVIARLAAPELQTQIKNAQDELESEKKFLSDLTGLPSERLYEVNPSQ 148

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +L    + R   L     +       V      S ++          S      +L  
Sbjct: 149 GVILRAPIDGRVSGLSVAESQEIKQGHIVARIVDDSRFKIDAKLYPDEFSNIKLGDELAL 208

Query: 184 KSSLLRALLSSHQKDLT------MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH-- 235
           + S+   +      D+         ++   K  V    +      + KS LE+   I   
Sbjct: 209 RFSIFDGIYYGTITDINPNPVPDGDEDEPAKGFVHWITIEGSNPGLVKSGLEVHVGIPLD 268

Query: 236 --------------------EQKNMLRHINELYDEANLEFANYLK-----------EISR 264
                               +++ +L  +  +  + +++    +K           ++ +
Sbjct: 269 KNNSTKVSWFSSPSTVTGFVDEERVLSTVEAVATQVHVKEMETVKKGDPIVSLSGSDVQK 328

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            +++      ++  +L+ L     Q  + +P+ G I    +       +  + +  +   
Sbjct: 329 TIQEKLDKIREKEFELSQLYSKVGQMEVRAPMDGIIASWDT-QLGAQVRSGEWMGYVFNT 387

Query: 325 SKL-TYIRAKVTPKQIQ--HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           S +  ++        I    +K+G    V            F+  +  +D +      ++
Sbjct: 388 SDMGMWVEV----DDIDVLLIKQGSPVKVTVDALPGET---FEGEVMHVDTM----GQDM 436

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +    + V +++           LR G  A     A +
Sbjct: 437 KGITKFAVDIEV------KGGPNLRPGMQARAYIDAGS 468



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 67/194 (34%), Gaps = 7/194 (3%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM-- 277
           E         L E + E+   ++    +   A  E    +K    +LE  ++  +D    
Sbjct: 77  EMSAEDIQYTLVEILAEEGTEVKMGQVIARLAAPELQTQIKNAQDELESEKKFLSDLTGL 136

Query: 278 -SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            S+        +   + +PI G +       S    +Q   + +IV       I AK+ P
Sbjct: 137 PSERLYEVNPSQGVILRAPIDGRVSGLSVAESQE-IKQGHIVARIV-DDSRFKIDAKLYP 194

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
            +  ++K G    +RF  +  I       I     P   + +       +  + ++ ++ 
Sbjct: 195 DEFSNIKLGDELALRFSIFDGIYYGTITDINPNPVPDGDEDEPAKGFVHW--ITIEGSNP 252

Query: 397 AFSDNNIELRNGFP 410
               + +E+  G P
Sbjct: 253 GLVKSGLEVHVGIP 266


>gi|327287890|ref|XP_003228661.1| PREDICTED: myosin-6-like [Anolis carolinensis]
          Length = 1938

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 77/194 (39%), Gaps = 9/194 (4%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLG 143
            +  E  + ++ K  S++  +  +  E   L    +  N     L+K   + ++ L +   
Sbjct: 1401 DAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILSEAKQ 1460

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY  + +++      S  RSL  +L ++++ Y   L+       LR    + Q++++ + 
Sbjct: 1461 KYEESQAELEASQKES--RSLSTELFKLKNAYEEALE---HLDTLRRENKNLQEEISDLT 1515

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                + + S ++L +  + +     EL+  + E +  L H       A LEF+    +  
Sbjct: 1516 EQLSEGSKSMHELEKVRKQLEADKAELQAALEEAEASLEHEEGKILRAQLEFSQIKADTE 1575

Query: 264  RDLEQNQRTFADEM 277
            R L +         
Sbjct: 1576 RKLAEKDEEMEQAK 1589



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 78/228 (34%), Gaps = 31/228 (13%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            +        + +++     ++ E     ++ L+F   K D   K  E  EE  ++   + 
Sbjct: 1534 QLEADKAELQAALEEAEASLEHEEGKILRAQLEFSQIKADTERKLAEKDEE--MEQAKRN 1591

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            H    +     + +  RS    L   + +  +  ++E + S    +    QK L + +  
Sbjct: 1592 HMRMIESLQASLDAETRSRNEALRVKKKMEGDLNEMEIQLSQANRVAVEAQKHLKIAQAH 1651

Query: 206  FEKNAVSQNDLNQQ-----------ERIVYKSTLELRE--NIHEQKNMLRHINELY---- 248
             + N +  +D+ +            ER       EL E  N+ EQ    R + E      
Sbjct: 1652 LKDNQIQLDDVLRANEDLKENIAIVERRNALLQAELEELRNVVEQTERGRKLAEQELIEA 1711

Query: 249  -------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                      N    N  K++  DL Q Q    + + +    E+  ++
Sbjct: 1712 SERVQLFHSQNTSLINQKKKMESDLSQLQSEVEEAVQECRNAEEKAKK 1759



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 75/214 (35%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   L+  +D   S ++ L      LEK   + E+Q  D+  K+
Sbjct: 1208 QIDNLQRVKQKLEKEKS--ELKLEMDDLGSNMEQLLKAKVNLEKICRTLEDQSSDYRAKF 1265

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              T   +                + R L+ K   +  +   +     ++  L+  L    
Sbjct: 1266 EETQRTLNDTNTQRAKLQTENGELSRQLEEKEALVSQLTRGKQSYTQQTEDLKRQLEEEA 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1326 KAKNALAHALQSARHDCDLLREQYEEEMEAKAELQRMLSKANSEVAQWRNKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L+E  + L Q  +   + +  +     + E+ 
Sbjct: 1386 EELEEAKKKLAQRLQDAEEAVEAVNAKCSSLEKT 1419



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 68/209 (32%), Gaps = 17/209 (8%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  +  + +  K+  I      I+ E++    L  K   L+   E  EE+L         
Sbjct: 1074 DKQQLEEKMKKKEFDINQQNSKIEDEQALAAQLQKKLKELQARIEELEEELEAERASRAK 1133

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +     +S     +  +L         +++L  K            +   M ++L E
Sbjct: 1134 VEKQ--RSELSRELEEISERLEEAGGATSVQVELNKKRET---------EFQKMRRDLEE 1182

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------YLKE 261
                 +       +    S  EL E I   + + + + +   E  LE  +       L +
Sbjct: 1183 ATLHHEATAAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSELKLEMDDLGSNMEQLLK 1242

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQK 290
               +LE+  RT  D+ S      +  ++ 
Sbjct: 1243 AKVNLEKICRTLEDQSSDYRAKFEETQRT 1271



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 75/207 (36%), Gaps = 22/207 (10%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            + +     +  + + K L   +   + A++ +N K   LEK     + ++ D +      
Sbjct: 1378 ETDAIQRTEELEEAKKKLAQRLQDAEEAVEAVNAKCSSLEKTKHRLQNEIEDLM--VDVE 1435

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             S      +    R+    L+  +  Y   + +LE      R+L +    +L  +KN +E
Sbjct: 1436 RSNAAAAALDKKQRNFDKILSEAKQKYEESQAELEASQKESRSLST----ELFKLKNAYE 1491

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            +     + L ++ + + +   +L E + E    +  + +               + + LE
Sbjct: 1492 EALEHLDTLRRENKNLQEEISDLTEQLSEGSKSMHELEK---------------VRKQLE 1536

Query: 268  QNQRTFADEMSKLTILEKTREQKTILS 294
             ++      + +     +  E K + +
Sbjct: 1537 ADKAELQAALEEAEASLEHEEGKILRA 1563



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 70/199 (35%), Gaps = 12/199 (6%)

Query: 87   FEDIETTDLIDLKKVSIKNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
               +++     +++      +     T+ + +     K        E  ++ +   +   
Sbjct: 1736 LSQLQSEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDL 1795

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +     +    + L+    R+R +     +LE++       +   +K    +K L
Sbjct: 1796 QMRLDEAEQLALKGGKKQLQKLEARVRELEN---ELESEQKRNAENVKGMRKFERRIKEL 1852

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
              +    + +L + + +V K  L++       K   R   E  ++AN   A + K +  +
Sbjct: 1853 TYQTEEDKKNLLRLQDLVDKLQLKV-------KAYKRQAEEAEEQANTNLAKFRK-VQHE 1904

Query: 266  LEQNQRTFADEMSKLTILE 284
            L++ +       S++  L+
Sbjct: 1905 LDEAEERADIAESQVNKLK 1923



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 20/202 (9%), Positives = 58/202 (28%), Gaps = 10/202 (4%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               +  +   I           S    LN K +   +      E+         +   K 
Sbjct: 1138 RSELSRELEEISERLEEAGGATSVQVELNKKRETEFQKMRRDLEEATLHHEATAAALRKK 1197

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL----RALLSSHQKDLTMMKNLFEK 208
                ++ +   +       + +   + +L+ +   L      LL +      + + L ++
Sbjct: 1198 HADSVAELGEQIDNLQRVKQKLEKEKSELKLEMDDLGSNMEQLLKAKVNLEKICRTLEDQ 1257

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE------LYDEANLEFANYLKEI 262
            ++  +    + +R +  +  +  +   E   + R + E              +    +++
Sbjct: 1258 SSDYRAKFEETQRTLNDTNTQRAKLQTENGELSRQLEEKEALVSQLTRGKQSYTQQTEDL 1317

Query: 263  SRDLEQNQRTFADEMSKLTILE 284
             R LE+  +        L    
Sbjct: 1318 KRQLEEEAKAKNALAHALQSAR 1339


>gi|327190036|gb|EGE57153.1| putative protein secretion protein, HlyD family [Rhizobium etli
           CNPAF512]
          Length = 514

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 78/277 (28%), Gaps = 20/277 (7%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F         S+  K   +     + L L+       A ++  +         FEK   
Sbjct: 220 LFRIDPRPYQFSVDQKKAALAEAEQSVLQLKAAMDAANAAVTGAEASRDRSLQAFEKFQQ 279

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S  +     R    S LE    +  ++ +        D A  +          ++     
Sbjct: 280 SNENAKSSGRGAVFSELE----VENRRGIYLTSEATVDTARAQAVQAKLAYESEINGTNP 335

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTY 329
           T A   ++L   E   +Q  + +P  G +           A     +P+M  +       
Sbjct: 336 TVARLQAELNNAEYELDQTVVRAPSDGYVTQVFLR-PGMMANPLPLRPVMVFIDSQDRML 394

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---------DPIISQQDNN 380
             A +     Q V+ G  A V F        K     +  +           +I  Q   
Sbjct: 395 AAAFIQNSL-QRVRVGDEAEVSFKAVPGKIFKARVGEVIDVMAQGQLQPSGALIDPQSPE 453

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
             +       +++ +      + +L  G  A+V    
Sbjct: 454 RVSPGQTLARIELLEST---EDYQLPGGVVADVAVYT 487


>gi|283851642|ref|ZP_06368921.1| hypothetical protein DFW101DRAFT_1491 [Desulfovibrio sp. FW1012B]
 gi|283572972|gb|EFC20953.1| hypothetical protein DFW101DRAFT_1491 [Desulfovibrio sp. FW1012B]
          Length = 340

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 89/235 (37%), Gaps = 28/235 (11%)

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLR---------HIN 245
           +L +   + EK A+S+  LN  E+ +     +L   R++  + +NM            +N
Sbjct: 110 ELPLESLMAEKEALSRAKLNGLEQALAVVDSKLTKVRQHQADLENMRADQSVAPIDVRLN 169

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT-----ILSPIAGTI 300
               +  L   +YL E  RDL Q +   A  +++    +     K      I SP+ G +
Sbjct: 170 AKEIDGLLLQRDYLAE-ERDLAQQRYDNAILIARSKYGKDIDVHKLPRIGYIRSPVDGYV 228

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           ++  S      A   Q  +  V       IRA V     Q +K G  AT+ F        
Sbjct: 229 LWTNSSLVPGMAFTKQASLITVGRLDPMLIRASVHEIAAQKLKVGDPATLVFHALPGQTF 288

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +     I K+D +   Q   LQ   +YEV     +L   +  + +  G   +V  
Sbjct: 289 QT---TITKVDFVA--QPAMLQQPSFYEV-----ELTLPNPGLRIHEGMRCDVTV 333


>gi|300779328|ref|ZP_07089186.1| secretion protein HlyD [Chryseobacterium gleum ATCC 35910]
 gi|300504838|gb|EFK35978.1| secretion protein HlyD [Chryseobacterium gleum ATCC 35910]
          Length = 439

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 49/120 (40%), Gaps = 2/120 (1%)

Query: 40  IEISVSSSGEILNEDNVV-EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +  ++ ++G +   ++    + S + G+IK    + G  + +G  L +  + E    +  
Sbjct: 73  LTSTIKANGLLRVPNDKKATVTSLYGGVIKTINFQIGDYVRKGQVLASISNPEYI-QLQE 131

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           + +++ +     + E      L +     +K  +S + +L     +  S   ++   GIS
Sbjct: 132 QYLTVNSRISFAEQEFRRQKELFDNDAGAKKNLQSSDAELKSLRTQRASLQRQLQLMGIS 191



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 60/177 (33%), Gaps = 36/177 (20%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
             + L+ +   + + +S  +++    K LF+ +A ++ +L         S  EL+    +
Sbjct: 125 EYIQLQEQYLTVNSRISFAEQEFRRQKELFDNDAGAKKNL-------QSSDAELKSLRTQ 177

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           + ++ R +                                          R    I +PI
Sbjct: 178 RASLQRQL---------------------------QLMGISPGKVNNRNLRSGLVITAPI 210

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +G I    +    +Y   S P+++++  +   ++  +V  + +  +K G     +  
Sbjct: 211 SGIISNINA-QIGSYVDVSSPVLEMI-DNSSIHLDLQVFERDLPKMKVGQNVQFKLT 265


>gi|119477620|ref|ZP_01617770.1| Secretion protein HlyD [marine gamma proteobacterium HTCC2143]
 gi|119449123|gb|EAW30363.1| Secretion protein HlyD [marine gamma proteobacterium HTCC2143]
          Length = 372

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 74/222 (33%), Gaps = 8/222 (3%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRL--DLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           V N     V ++L    +    I ++R   DL+N  + + A  +        +       
Sbjct: 71  VKNNQEVQVGQTLFAIDSSQYQIAVDRAVSDLDNAKNQVNASYAVVSSAKANLLAAQANQ 130

Query: 210 AVSQNDLNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             +Q D ++  R+       +    I   K  L         AN E    L++     ++
Sbjct: 131 VKAQQDSDRLTRLYNDDPGTISVRRIEVSKASLEQAKAGVIAANAEIERALQQSGGSNKE 190

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
           N        S ++          + +   G I   ++     YA    P+M +V      
Sbjct: 191 NNAVIKSAESAVSKATLDLSNTQVKASNRGVITDLRAD-IGQYASPGSPVMTLVAIHD-V 248

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +I A+ T   + H+K G    + F     +  + F+  I  I
Sbjct: 249 WINAEFTENNLGHMKVGGDVEILF---DIVPGQIFEGTIRSI 287


>gi|330940843|gb|EGH43814.1| secretion protein HlyD [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330953832|gb|EGH54092.1| secretion protein HlyD [Pseudomonas syringae Cit 7]
 gi|330976075|gb|EGH76141.1| secretion protein HlyD [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 294

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 70/224 (31%), Gaps = 21/224 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q+      R    +  E +E   + +   +         NL     L+E      +  
Sbjct: 78  IDQDRFRLALRQAQATVAERQETWEQARRENKR---NRGLGNLVAREQLEESQSREARAL 134

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +    +   +   ++  I SP+ G  + +++     +    +P++ +V  S   +I
Sbjct: 135 SALGESKVAVDAAQLNLDRSVIRSPVDGY-LNDRAPREHEFVTAGRPVLSVV-DSTSFHI 192

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQDN 379
                  ++  +  G    +R             +I+  I+           P ++   +
Sbjct: 193 DGYFEETKLDGIHVGQGVDIRVIGDNARLTGHVVSIVAGIEDRDRSSGSNLLPNVNPAFS 252

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT--AKNTT 421
            ++  +   V +   D+     +  +  G  A V      +  +
Sbjct: 253 WVRLAQRIPVRIAFDDV---PADFRMIAGRTATVSIIDDTQERS 293



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++V+I    SG+I+K +V +   + +G  L T +       +   + ++   +   +  +
Sbjct: 46  DIVQIAPDVSGLIQKVEVTDNQPVHKGQVLFTIDQDRFRLALRQAQATVAERQETWEQAR 105

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                     +++ +      EQL +   +     S +    ++     L +  + +RS
Sbjct: 106 RENKRNRGLGNLVAR------EQLEESQSREARALSALGESKVAVDAAQLNLDRSVIRS 158


>gi|319943263|ref|ZP_08017546.1| multidrug RND efflux transporter [Lautropia mirabilis ATCC 51599]
 gi|319743805|gb|EFV96209.1| multidrug RND efflux transporter [Lautropia mirabilis ATCC 51599]
          Length = 424

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 53/159 (33%), Gaps = 4/159 (2%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G +   + V  +     G + +   + G+ +  G  L   +       +D  + +
Sbjct: 80  VIRAVGNVTPYNTVTVVPQVE-GRLLRVHFQEGAHVQAGQLLAELDPRALQASLDEARGT 138

Query: 103 IKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
               +  +   +S L   + L  +  V  +  E++   +     +  +  +KV N  +  
Sbjct: 139 QAQNQAELKNARSDLARYERLYRQDSVSRQQLETQRALVRQLQARSTTDQAKVDNARVQL 198

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            Y  +   +     +    +      S    L+S  Q D
Sbjct: 199 GYTKIHAPVAGRLGLLKANVGAMIGPSTTDGLVSIVQTD 237



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 12/141 (8%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLE 254
           Q +  +++  F++ A  Q      E         L E    Q      + N   D A  E
Sbjct: 98  QVEGRLLRVHFQEGAHVQAGQLLAELDPRALQASLDEARGTQAQNQAELKNARSDLARYE 157

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEK--------TREQKTILSPIAGTIVYNQSF 306
                  +SR   + QR    ++   +  ++              I +P+AG  +     
Sbjct: 158 RLYRQDSVSRQQLETQRALVRQLQARSTTDQAKVDNARVQLGYTKIHAPVAGR-LGLLKA 216

Query: 307 SSSNYAQQSQP--LMKIVPHS 325
           +       S    L+ IV   
Sbjct: 217 NVGAMIGPSTTDGLVSIVQTD 237


>gi|308049056|ref|YP_003912622.1| secretion protein HlyD family protein [Ferrimonas balearica DSM
           9799]
 gi|307631246|gb|ADN75548.1| secretion protein HlyD family protein [Ferrimonas balearica DSM
           9799]
          Length = 349

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 68/205 (33%), Gaps = 24/205 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN--LFEKNAV 211
           +Y ++       +           +     K++L++   ++    L + +N  L  +  +
Sbjct: 78  DYQLALEQAKADLAQAHQNHEAREQELNVAKATLVQKQQTAANAKLKLTRNSKLVSQGLI 137

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q  L+  +     +   +     E   +   +++   +A +E A               
Sbjct: 138 TQEALDDSQNAATVADAAVTAAEAEIARLKVQLSDRDGDAAVELAE-------------- 183

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 +KL        +  +++P+ G +   Q  S  +Y     P + +V     ++I 
Sbjct: 184 ------AKLAQARLDLARTRMVAPVDGIVTNLQLQS-GSYLNAGSPALFLV-SDGNSWIS 235

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYA 356
           A    K I H+  G    V F    
Sbjct: 236 ADFNEKGIAHLGTGTPVWVAFDALP 260



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 51/149 (34%), Gaps = 11/149 (7%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V+NG  + +G  LL+ +D +    ++  K  +     H + E    +    K
Sbjct: 51  SGNVLAVAVKNGQHVKRGDALLSLDDSDYQLALEQAKADLAQ--AHQNHEAREQELNVAK 108

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR---------SI 174
             +++K   +   +L         +   +    +     +  +    +           +
Sbjct: 109 ATLVQKQQTAANAKLKLTRNSKLVSQGLITQEALDDSQNAATVADAAVTAAEAEIARLKV 168

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            L+  D +    L  A L+  + DL   +
Sbjct: 169 QLSDRDGDAAVELAEAKLAQARLDLARTR 197


>gi|254561592|ref|YP_003068687.1| hypothetical protein METDI3179 [Methylobacterium extorquens DM4]
 gi|254268870|emb|CAX24831.1| conserved hypothetical protein; putative exported protein
           [Methylobacterium extorquens DM4]
          Length = 293

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 89/245 (36%), Gaps = 20/245 (8%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +   +     L  ++S+ +NR     K+  + A L S  ++  +  +  +  + +  +  
Sbjct: 40  AQKLKIGSATLGILKSVPVNR-GAAVKAGDIIAQLDSSVEEANVALSRAQAESTAGIEAQ 98

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q    +YK  LE +  + +       ++++  +  +   +   EI   L+          
Sbjct: 99  QTRVELYKRRLERQNQLSKGIVTQEKLDQVEADYEIGRRDLQTEI---LKHKLNGI---- 151

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
            +L   E   E + I SPI G +   +  S+  + +Q   +  +V      Y+ A +   
Sbjct: 152 -ELKRAEAQLELRMIRSPIRGIVTE-RLMSAGEFVRQDSAIFTLV-QLDPLYVEAYLPVA 208

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           + + +  G  ATV            ++A +  +D +             + V L++ +  
Sbjct: 209 RWKEIALGMPATVVL---DQPIGGAYEAKVSVVDQVFDAASGT------FGVRLELPNPD 259

Query: 398 FSDNN 402
           F    
Sbjct: 260 FKLPG 264



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 56/152 (36%), Gaps = 9/152 (5%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           ++     ++I S   GI+K   V  G+ +  G  +   +       + L +   ++    
Sbjct: 36  VVEPAQKLKIGSATLGILKSVPVNRGAAVKAGDIIAQLDSSVEEANVALSRAQAEST--- 92

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                + ++    + ++ ++  E R+ QL   +           +Y I       ++   
Sbjct: 93  -----AGIEAQQTRVELYKRRLE-RQNQLSKGIVTQEKLDQVEADYEIGRRDLQTEILKH 146

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           ++  I L R + + +  ++R+ +     +  M
Sbjct: 147 KLNGIELKRAEAQLELRMIRSPIRGIVTERLM 178


>gi|258575607|ref|XP_002541985.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237902251|gb|EEP76652.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 1258

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 71/197 (36%), Gaps = 8/197 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E      L++V++   +  ++     +   N    +  +  ++RE++L D   K ++   
Sbjct: 594 ELQRQEQLREVALATQKEELEGYFQEIK--NEDDRLAAEQLQAREQELYDERDKLNANWE 651

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +       S          +++S        + +    +A L + Q +L   +   +   
Sbjct: 652 QRLQDLEQSKTEMAADYDGKLQSKQGELDTKQGELESKQAELDAKQAELEAKQGELDAK- 710

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA---NLEFANYLKEISRDLE 267
             Q +LN  +  +     EL+    E +     ++   +E      E  + + E+     
Sbjct: 711 --QEELNTAKSDLEAKQAELKAKQGELEAKQAEVDAKQEEISGLKSELESKIAELEGKQH 768

Query: 268 QNQRTFADEMSKLTILE 284
           + +   A+  SK T L+
Sbjct: 769 ELEGKQAELDSKQTELQ 785


>gi|194388230|dbj|BAG65499.1| unnamed protein product [Homo sapiens]
          Length = 986

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 5/192 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           LI+     I  L+  ++  K+    +  +        E+   +      +    C +   
Sbjct: 376 LIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDC-EFLR 434

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +  + R  +      RS+       +        L   + + +    +L  KNA    
Sbjct: 435 AELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNA---- 490

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ +Q  +  ++ ++L     E ++ L  I++       E    L+ + ++L  +QR   
Sbjct: 491 EVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQ 550

Query: 275 DEMSKLTILEKT 286
                L    ++
Sbjct: 551 VLQGSLETSAQS 562


>gi|190338446|gb|AAI63537.1| Myosin, heavy polypeptide 1, skeletal muscle [Danio rerio]
          Length = 1937

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L ++  KY    +++   G  
Sbjct: 1416 LEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQKYEEGQAEL--EGAQ 1473

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   L+    + Q++++ +     +   S ++L +
Sbjct: 1474 KEARSLSTELFKMKNSYEETLD---QLETLKRENKNLQQEISDLTEQLGETGKSIHELEK 1530

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      EI R L +          
Sbjct: 1531 SKKAVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEIEQIKR 1590

Query: 278  --SKLTILEKTREQKTILS 294
               ++T   ++     + S
Sbjct: 1591 NSQRITDSMQSTLDSEVRS 1609



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 75/229 (32%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1208 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKN 1265

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++                  R L+ K   +  +   +     +   L+  +    
Sbjct: 1266 DENLRQINDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEV 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1326 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1386 EELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLMI 1432



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 74/226 (32%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + +  K      L   I+ E+S    L  K   L+   
Sbjct: 1058 EGDLKLAQESIMDLENDKQQSEEKLKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1117

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1118 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1171

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1172 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1226

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +       + +   +LE+  RT  D++S++        ++ 
Sbjct: 1227 KMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKNDENLRQI 1272


>gi|167623559|ref|YP_001673853.1| RND family efflux transporter MFP subunit [Shewanella halifaxensis
           HAW-EB4]
 gi|167353581|gb|ABZ76194.1| efflux transporter, RND family, MFP subunit [Shewanella
           halifaxensis HAW-EB4]
          Length = 447

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 95/288 (32%), Gaps = 51/288 (17%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   ++      K    ++    L   +L+    +        + DL   + L ++N +S
Sbjct: 107 YQIRLAQAQADRKALEGQLEGKKLQLKNLQLSLEIENNRYDLVKSDLKRKETLRKQNLIS 166

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q++L+ + + +     +L+E       +   +N + +E  +  A  L+ ++R+ E     
Sbjct: 167 QSELDGERQNLLAQQQKLQE-------LDNSLNLMPNETQILEAQRLQAVAREQE----- 214

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                      +    +  I  P  G +      SS       Q L +I    ++  + A
Sbjct: 215 ----------AQSQLTKTEIRLPFEGRVAEVNVESS-QVVSPQQVLARIN-GIEVMEVEA 262

Query: 333 KVTPKQIQHVKK------------------GYTATVRF--PHYADIREKKFKAIIEKIDP 372
           +V+   +  + K                  G +A +      Y+     +   I E +DP
Sbjct: 263 QVSLGDVMTLMKTVNRPQEQEKQLPRAETLGLSAEITLKGATYSFSWPAQITRIGETVDP 322

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            ++     LQ ++ Y       DL    +   L NG            
Sbjct: 323 TLATVSVVLQVEQQYR------DLKMGQSP-PLVNGMFVSARIKGGER 363


>gi|38045919|ref|NP_005329.3| huntingtin-interacting protein 1 [Homo sapiens]
 gi|206729937|sp|O00291|HIP1_HUMAN RecName: Full=Huntingtin-interacting protein 1; Short=HIP-1;
           AltName: Full=Huntingtin-interacting protein I;
           Short=HIP-I
 gi|83405938|gb|AAI10546.1| Huntingtin interacting protein 1 [Homo sapiens]
 gi|168278401|dbj|BAG11080.1| huntingtin-interacting protein 1 [synthetic construct]
          Length = 1037

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 5/192 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           LI+     I  L+  ++  K+    +  +        E+   +      +    C +   
Sbjct: 376 LIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDC-EFLR 434

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +  + R  +      RS+       +        L   + + +    +L  KNA    
Sbjct: 435 AELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNA---- 490

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ +Q  +  ++ ++L     E ++ L  I++       E    L+ + ++L  +QR   
Sbjct: 491 EVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQ 550

Query: 275 DEMSKLTILEKT 286
                L    ++
Sbjct: 551 VLQGSLETSAQS 562


>gi|115523698|ref|YP_780609.1| RND family efflux transporter MFP subunit [Rhodopseudomonas
           palustris BisA53]
 gi|115517645|gb|ABJ05629.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
           palustris BisA53]
          Length = 398

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 20/173 (11%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + EL  +   + A+        ++  Q  +    + +   E    QK + +P  G
Sbjct: 138 RAQAKVAELSLDRAKQLASRQFGPQATVDTAQAAYDQANAGIAKTEALISQKLVKAPFDG 197

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYA 356
            ++  +      Y        +IV  + L+ + A   VT K    +K G T  V    Y 
Sbjct: 198 -VLGVRHAEVGQYLTAGT---QIVTLTDLSVVYANFTVTEKDSGTLKVGQTVRVAVDAYP 253

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                 F+  +  I+P IS    N++ Q               + +  L+ G 
Sbjct: 254 SR---VFEGKLTTIEPQISTDTRNIRVQ-----------ATIDNPDGILKPGM 292


>gi|91976287|ref|YP_568946.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5]
 gi|91682743|gb|ABE39045.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5]
          Length = 397

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 55/182 (30%), Gaps = 16/182 (8%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + EL  +   + A         ++Q Q +F    + +   E    QK + +P  G
Sbjct: 137 RAQAKVAELSLDRAKQLAARQFGPQATVDQAQASFDQASAGIARTEAVISQKLVRAPFDG 196

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +      Y      ++ +       Y    VT K    +K G    V    Y   
Sbjct: 197 -VLGVRRVEVGQYLTAGTQIVTLT-DLSRVYTNFTVTEKDSGTLKVGQVVRVSVDAYP-- 252

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             K F+  I  I+P IS    N++ Q               +    L+ G  A       
Sbjct: 253 -GKVFEGKITTIEPQISSDTRNIRVQ-----------GTLENPEKILKPGMFATTTVVLP 300

Query: 419 NT 420
             
Sbjct: 301 EK 302


>gi|268316996|ref|YP_003290715.1| efflux transporter, RND family, MFP subunit [Rhodothermus marinus
           DSM 4252]
 gi|262334530|gb|ACY48327.1| efflux transporter, RND family, MFP subunit [Rhodothermus marinus
           DSM 4252]
          Length = 374

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 70/218 (32%), Gaps = 15/218 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFANYL-KEISRDLEQNQR 271
            +L   ER +    LE+     E +   +     L  E   E A    +E    L+  + 
Sbjct: 96  QELIDAERRIELRQLEVDNLRREFERQQQLFDRRLISEQEYERARRAYEEARLQLQAARE 155

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA-----QQSQPLMKIVPHSK 326
             A         E  R +  + +PI+G ++                Q+   LM +   + 
Sbjct: 156 QLALLREGRVQTESGRFETVVRAPISGYVLEKMIEVGDPVVPLTSYQEGTVLMTMADMND 215

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN----NLQ 382
               R  V    +  +++G TA ++       +       + KI     +++N     ++
Sbjct: 216 -LVFRGTVDEIDVGRLQEGMTAQIKIGALPQAQ---VTGRLSKIWLKAKKEENATVFPVE 271

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +    V+    D       + LR G+ A      +  
Sbjct: 272 IEIVEAVMRDPRDPEAPPRPLVLRAGYSANAEIIIEKR 309



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 89/236 (37%), Gaps = 15/236 (6%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
             + G I     +  +KS  +G++++  V+ G  +  GTPLL  +        I+    I
Sbjct: 47  ALAVGTIEPRVEI-SVKSQVAGVVRRLFVDAGDYVEAGTPLLEIQPNPTPQELIDAERRI 105

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +L+++ + NLR   + ++   D         E+A  + EE  L          + +    
Sbjct: 106 ELRQLEVDNLRREFERQQQLFDRRLISEQEYERARRAYEEARLQLQAAR-EQLALLREGR 164

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLEN---KSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           + +     +  +    S Y+    +E       L      +    +  M +L  +  V +
Sbjct: 165 VQTESGRFETVVRAPISGYVLEKMIEVGDPVVPLTSYQEGTVLMTMADMNDLVFRGTVDE 224

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            D+ + +      T +++     Q  +   +++++ +A  E    +  +  ++ + 
Sbjct: 225 IDVGRLQ---EGMTAQIKIGALPQAQVTGRLSKIWLKAKKEENATVFPVEIEIVEA 277


>gi|170696455|ref|ZP_02887582.1| efflux transporter, RND family, MFP subunit [Burkholderia graminis
           C4D1M]
 gi|170138660|gb|EDT06861.1| efflux transporter, RND family, MFP subunit [Burkholderia graminis
           C4D1M]
          Length = 511

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 53/145 (36%), Gaps = 4/145 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + +++ G +    +V  +    SGI++    + G  + +G  L   +      
Sbjct: 143 ATQGEMPVVLTALGTVTPLASV-TVLPQLSGILQDVYFKEGQMVKKGDLLAQIDPRPYQI 201

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +D  + ++      + T +  L     L  +  +  +  +++   +  + G   S  + 
Sbjct: 202 SLDNAQGTLARDEALLQTARLDLKRYQTLLAQDSIASQQVDTQASLVRQYEGTVKSDKAN 261

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYL 176
           V  + +  VY  +   ++    +  
Sbjct: 262 VDTFKLDLVYARITAPVSGRVGLRQ 286


>gi|168230814|ref|ZP_02655872.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194472098|ref|ZP_03078082.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194458462|gb|EDX47301.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|205334857|gb|EDZ21621.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
          Length = 372

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  +      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKINDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 68/174 (39%), Gaps = 17/174 (9%)

Query: 18  KRMTLLSIIGIIGLITW-SILLPI-------------EISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+++W  I  P+             E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMVSWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G  + +   L   +  +  + I   + ++  L    + +++A +    +
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNA--ERQQAAAELKLAR 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +   ++ + +        +T   V    I ++   +K     + +   N
Sbjct: 128 VTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTN 181


>gi|192290348|ref|YP_001990953.1| efflux transporter RND family, MFP subunit [Rhodopseudomonas
           palustris TIE-1]
 gi|192284097|gb|ACF00478.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
           palustris TIE-1]
          Length = 400

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 59/204 (28%), Gaps = 20/204 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLE 267
            +++ +    ++ + ++  +L       K     +N         F  A  + E + DL 
Sbjct: 107 VIAEIEAPDLDQQLLQARADLASQQASAKLSEATLNRRKTLVASNFVSAQEIDERTADLA 166

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPH 324
             +       + +  LE     K I +P  G +   ++              P M +V  
Sbjct: 167 AKKAAVNSGQANVERLEALAGYKKITAPFDGIVTE-RNTDVGALINAGSSSGPAMFVVSD 225

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                +   V       V+ G  A +  P Y         A +E     +      ++ Q
Sbjct: 226 IAKLRVYVNVPQNYAPLVRIGGKAVIALPEYPGRTFP---ATVEASSQAVDVASGTMRIQ 282

Query: 385 EYYEVILKITDLAFSDNNIELRNG 408
                      L   +   EL  G
Sbjct: 283 -----------LGLDNAKGELMPG 295


>gi|169259784|ref|NP_001108561.1| myosin, heavy polypeptide 1.1, skeletal muscle [Danio rerio]
 gi|288856329|ref|NP_001124138.2| myosin, heavy polypeptide 1.1, skeletal muscle [Danio rerio]
 gi|220941696|emb|CAX15437.1| novel myosin family protein [Danio rerio]
          Length = 1937

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L ++  KY    +++   G  
Sbjct: 1416 LEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQKYEEGQAEL--EGAQ 1473

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   L+    + Q++++ +     +   S ++L +
Sbjct: 1474 KEARSLSTELFKMKNSYEETLD---QLETLKRENKNLQQEISDLTEQLGETGKSIHELEK 1530

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      EI R L +          
Sbjct: 1531 SKKAVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEIEQIKR 1590

Query: 278  --SKLTILEKTREQKTILS 294
               ++T   ++     + S
Sbjct: 1591 NSQRITDSMQSTLDSEVRS 1609



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 75/229 (32%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1208 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKN 1265

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++                  R L+ K   +  +   +     +   L+  +    
Sbjct: 1266 DENLRQINDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEV 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1326 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1386 EELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLMI 1432



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 74/226 (32%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + +  K      L   I+ E+S    L  K   L+   
Sbjct: 1058 EGDLKLAQESIMDLENDKQQSEEKLKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1117

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1118 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1171

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1172 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1226

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +       + +   +LE+  RT  D++S++        ++ 
Sbjct: 1227 KMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKNDENLRQI 1272


>gi|39995500|ref|NP_951451.1| RND family efflux transporter MFP subunit [Geobacter sulfurreducens
           PCA]
 gi|39982263|gb|AAR33724.1| efflux transporter, RND family, MFP subunit [Geobacter
           sulfurreducens PCA]
 gi|298504500|gb|ADI83223.1| efflux pump, RND family, membrane fusion lipoprotein [Geobacter
           sulfurreducens KN400]
          Length = 370

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 45/177 (25%), Gaps = 20/177 (11%)

Query: 245 NELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +E      ++     ++++   +E+                       I+SP+AG +   
Sbjct: 143 DEAVTRQEMDNRRADRDVAEQGVERATARLMASRESARAAGVVAGYTRIVSPLAGVVTAK 202

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           Q   +        PLM I        + A V       V+ G    V             
Sbjct: 203 QV-ENGMTVFPGTPLMTI-EGDGGRRLEASVPESLAGRVRLGQRVPVTIDG----AGLSL 256

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +  + +I P              + V + +           +R+G            
Sbjct: 257 EGRVVEIVPAADPASRT------FTVKVDLAGEG-------IRSGMFGRAFIATGQR 300


>gi|33596280|ref|NP_883923.1| HlyD family secretion protein [Bordetella parapertussis 12822]
 gi|33602059|ref|NP_889619.1| HlyD family secretion protein [Bordetella bronchiseptica RB50]
 gi|33566049|emb|CAE36946.1| putative HlyD family secretion protein [Bordetella parapertussis]
 gi|33576497|emb|CAE33575.1| putative HlyD family secretion protein [Bordetella bronchiseptica
           RB50]
          Length = 297

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 65/199 (32%), Gaps = 25/199 (12%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +  LR +        L  A  L++    L+Q +   A    +L        +  +++ +A
Sbjct: 106 EQALRDVKRNRALGQLVAAEALEQSQARLQQIEAARAQAEVQLDTARLNLARSRVVAGVA 165

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I      +  +YA   +P+M +V  +   Y+       ++  + +G   TV       
Sbjct: 166 GRITNLDLRA-GSYASAGKPVMALV-DAGSFYVEGYFEETKLARIHEGDGVTVTL----M 219

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQ---------------EYYEVILKITDLAFSDNN 402
              +     +E I   I+ +D +                   +   V ++I  +      
Sbjct: 220 GDSRAIHGHVESIALGIADRDRSTGANLLPNVNPTFNWVRLAQRIPVRVRIDQV---PAG 276

Query: 403 IELRNGFPAEVLF-TAKNT 420
           + L  G  A V    A   
Sbjct: 277 VRLVAGQTATVAIDQAGPR 295



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 15/132 (11%), Positives = 39/132 (29%), Gaps = 5/132 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            +  VV++    SG++    V +   +  G  L   +       +   +         + 
Sbjct: 47  VKAYVVQVAPDVSGLVTAVPVRDNQDVQAGDVLFEID--RARFQLACDQAQAALRAQQVA 104

Query: 112 TEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            E++  D   N+     V  +A E  + +L            ++    ++     +   +
Sbjct: 105 HEQALRDVKRNRALGQLVAAEALEQSQARLQQIEAARAQAEVQLDTARLNLARSRVVAGV 164

Query: 169 TRMRSIYLNRLD 180
               +    R  
Sbjct: 165 AGRITNLDLRAG 176


>gi|19386917|gb|AAL87037.1|AF365404_1 huntingtin-interacting protein 1 [Homo sapiens]
          Length = 1030

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 5/192 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           LI+     I  L+  ++  K+    +  +        E+   +      +    C +   
Sbjct: 369 LIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDC-EFLR 427

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +  + R  +      RS+       +        L   + + +    +L  KNA    
Sbjct: 428 AELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNA---- 483

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ +Q  +  ++ ++L     E ++ L  I++       E    L+ + ++L  +QR   
Sbjct: 484 EVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQ 543

Query: 275 DEMSKLTILEKT 286
                L    ++
Sbjct: 544 VLQGSLETSAQS 555


>gi|320186316|gb|EFW61052.1| Putative membrane protein [Shigella flexneri CDC 796-83]
          Length = 285

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 23/209 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K    +  ++       +  N+ +   V+  DL            EL     +     
Sbjct: 37  DGKIRAEKVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQ 95

Query: 242 RHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +  +EAN           A  L   + +++  Q +     + L   +    Q  I 
Sbjct: 96  SDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIR 155

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTAT 349
           +P++G +    +    +YA   +PL  +V       I      K+      H+++G  A 
Sbjct: 156 APVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQ 209

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +          K  +  +  I   I  Q 
Sbjct: 210 ITL----YSDNKTLRGHVSSIGRAIYDQS 234



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSIIIVAIVAVLAGWWLWNYYMQ--SPWTRDGKIRAE--KVSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 156


>gi|260556110|ref|ZP_05828329.1| membrane-fusion protein [Acinetobacter baumannii ATCC 19606]
 gi|260410165|gb|EEX03464.1| membrane-fusion protein [Acinetobacter baumannii ATCC 19606]
          Length = 446

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 79/232 (34%), Gaps = 32/232 (13%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDL 266
             ++Q D   QE  +  S   ++    ++   +  +NE   E   +   Y ++     DL
Sbjct: 87  QLIAQIDSTTQENSLKTSDANIKNLEAQRLQQIASLNEKQLEYRRQQQMYAQDATPRADL 146

Query: 267 EQNQRTFADEMSKLTILEKTRE--------------QKTILSPIAGTIVYNQSFSSSNYA 312
           E  +  +    +++  L+   E                 I++P  GT+V           
Sbjct: 147 ESAEAAYKTAQAQVKALDAQIESAKITRSTAQTNIGYTRIVAPTDGTVVAI-VTEEGQTV 205

Query: 313 QQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +Q    IV  +  +   I+A+V+   I  V+KG      F    D  ++       + 
Sbjct: 206 NANQSAPTIVKIAKLQNMTIKAQVSEADIMKVEKGQQVY--FTTLGDETKRYATLRQIEP 263

Query: 371 DPIISQQDNNLQTQE------YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            P     ++N  T        YY  +  +      + + +LR    A+V   
Sbjct: 264 APDSISSESNSTTSSTTSSAVYYNALFDVP-----NTDGKLRIDMTAQVYIV 310



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 56/150 (37%), Gaps = 10/150 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     ++ + +  SG +KK  V+ G Q+ QG  +   +     + +   
Sbjct: 46  IENNVLATGTLDA-TKLISVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSTTQENSLKTS 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +IKNL      + ++L+         EK  E R +Q +           +       +
Sbjct: 105 DANIKNLEAQRLQQIASLN---------EKQLEYRRQQQMYAQDATPRADLESAEAAYKT 155

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               +K    ++ S  + R   +      R
Sbjct: 156 AQAQVKALDAQIESAKITRSTAQTNIGYTR 185


>gi|281422585|ref|ZP_06253584.1| secretion protein, HlyD family [Prevotella copri DSM 18205]
 gi|281403409|gb|EFB34089.1| secretion protein, HlyD family [Prevotella copri DSM 18205]
          Length = 327

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 77/219 (35%), Gaps = 16/219 (7%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A +    ++ ++G+IG  T   L   + ++   GE+   +  V  K P  G + + +V+ 
Sbjct: 13  AVIGFTAVVILVGVIGFFT---LEQKDDTI--QGEVEVSEYRVSCKLP--GRVVELRVQE 65

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH--IDTEKSALDFLNNKYDVLEKAFE 132
           G  +  G  L   E  E      + + +         +    +  + +   Y ++++A  
Sbjct: 66  GDYVHVGDTLAILEVPEMKSQEQMLQATNAAAEAMKDLTDAGARKEQIQGAYQLVQQA-- 123

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              E       K +     +FN G+ S  +         ++         ++  + +   
Sbjct: 124 ---EAAATIAKKTYDRMQNLFNEGVISGQK-RDEAYAAYKATEAQVAAARSQYDMAKNGA 179

Query: 193 SSHQKDLTMMKNLFEKNAVSQND-LNQQERIVYKSTLEL 230
              +K +        K+AV     L ++   + +   E+
Sbjct: 180 REQEKRMAANNTQASKSAVDVVKNLLKETVQIAQCEGEV 218


>gi|218689591|ref|YP_002397803.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli ED1a]
 gi|218427155|emb|CAR08038.2| undecaprenyl pyrophosphate phosphatase [Escherichia coli ED1a]
          Length = 285

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 59/187 (31%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +E N           
Sbjct: 59  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNETNRRRHLSQNFIS 117

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 118 AEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 176

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 177 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 227

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 228 RAIYDQS 234



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 50/177 (28%), Gaps = 21/177 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNFYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  +++   +  G  LLT +              I  L       K+  D        L 
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPF---------QIAELNAQAQLAKAQSD--------LA 99

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           KA      +         +      N  + ++  S+      ++         E ++
Sbjct: 100 KANNETNRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 156


>gi|126642655|ref|YP_001085639.1| RND efflux transporter [Acinetobacter baumannii ATCC 17978]
          Length = 317

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 74/203 (36%), Gaps = 8/203 (3%)

Query: 21  TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ 80
            +++++G+I    W         +   G +  E   V + +     I++  V+ G +I +
Sbjct: 1   MVIALLGLILFGLWKSYQ--SKPIELQGRVEAET--VHVSTKVPSRIEEIYVQEGQKISK 56

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G PL+     E          ++++      T        N   D L   ++S + Q  +
Sbjct: 57  GQPLVRLVSPEIEAKKQQALATLQSALAFQSTVDRGSQQEN--IDTLYANWQSMKAQ-AN 113

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                +     ++  G+ S  R  +M   +  +  L+    + + +  +   +S QK   
Sbjct: 114 LAKTTYQRGENLYRQGVISRQRRDEMLAAQTSAQELSEAAYQ-QYARAKRGSTSQQKSTA 172

Query: 201 MMKNLFEKNAVSQNDLNQQERIV 223
             +    K AVS+    + E  +
Sbjct: 173 DAQVEIAKAAVSEAQALEAETRL 195


>gi|53804055|ref|YP_114046.1| HlyD family multidrug efflux protein [Methylococcus capsulatus str.
           Bath]
 gi|53757816|gb|AAU92107.1| multidrug efflux system, HlyD family subunit [Methylococcus
           capsulatus str. Bath]
          Length = 371

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 51/132 (38%), Gaps = 8/132 (6%)

Query: 53  EDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
              +  ++S       SG +++    +GS++ +G  L   +       +   +  ++  R
Sbjct: 48  TGRLQAVESVEVRARVSGYLEQILFADGSRVKKGDLLFVVDPRPYVAQLQQAQAGLERAR 107

Query: 108 CHIDTEKSALDFLNNK---YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +   ++ L    +      + E+ +++R + L+  L    S  ++V    ++  +  +
Sbjct: 108 SRLKLARNHLQRAESPLKEQAISEEEYDTRRQSLVQALADVESARAEVDLARLNVEFTQV 167

Query: 165 KMKLTRMRSIYL 176
           +  +    S  L
Sbjct: 168 RAPIDGRISRKL 179


>gi|226942558|ref|YP_002797631.1| HlyD family secretion protein [Azotobacter vinelandii DJ]
 gi|226717485|gb|ACO76656.1| HlyD family secretion protein [Azotobacter vinelandii DJ]
          Length = 297

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 75/222 (33%), Gaps = 31/222 (13%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ------N 269
           L + +   Y+  ++  E +   +     +N+   +   +    +      +         
Sbjct: 73  LLRIDDEHYRLAVKQAEALVASRKAQLQMNQENAQRRSDLDAMVVSRESRINASHMASAA 132

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q  + + +++L   +   ++  + +P+ G +     F   ++A + +  M +V  S   Y
Sbjct: 133 QAEYQEALAQLDRTKLDLKRTEVHAPVDGYVTNLNVF-EGDFANRGEAAMALV-DSHSFY 190

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ----- 384
           +       ++  ++ G  A +R         ++    ++ I   I  +DN    +     
Sbjct: 191 VYGYFEETRLPLIRVGDKAELRLMS-----GERLSGQVDSIARGIYDRDNPESRELVADV 245

Query: 385 ----------EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                         V ++I ++      + L  G    V+ T
Sbjct: 246 NPTFNWVRLARRIPVRIRIEEV---PEGVTLAAGLTCTVIVT 284



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 64/190 (33%), Gaps = 10/190 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+ I    +G++ +  V++  Q+ +G  LL  +D      +   +  + + +  + 
Sbjct: 41  VRADVINIAPDVAGLVVEVAVKDNQQVKKGDLLLRIDDEHYRLAVKQAEALVASRKAQLQ 100

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQ---LLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             +       +  D +  + ESR            +Y    +++    +      +   +
Sbjct: 101 MNQENAQR-RSDLDAMVVSRESRINASHMASAAQAEYQEALAQLDRTKLDLKRTEVHAPV 159

Query: 169 TR-MRSIYLNRLDLENKSSLLRALLSSHQ----KDLTMMK-NLFEKNAVSQNDLNQQERI 222
              + ++ +   D  N+     AL+ SH           +  L      ++  L   ER+
Sbjct: 160 DGYVTNLNVFEGDFANRGEAAMALVDSHSFYVYGYFEETRLPLIRVGDKAELRLMSGERL 219

Query: 223 VYKSTLELRE 232
             +     R 
Sbjct: 220 SGQVDSIARG 229


>gi|313105924|ref|ZP_07792186.1| hypothetical protein PA39016_000120011 [Pseudomonas aeruginosa
           39016]
 gi|310878688|gb|EFQ37282.1| hypothetical protein PA39016_000120011 [Pseudomonas aeruginosa
           39016]
          Length = 346

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/318 (11%), Positives = 94/318 (29%), Gaps = 80/318 (25%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V +   + QG  LL  +               +  R  +   +++L  L+ + 
Sbjct: 43  GRIIELPVRDNQLVRQGDLLLRIDP--------------RPYRDALAQARASLITLDRQI 88

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++ +++  ++E +    +       ++    G                            
Sbjct: 89  ELTQRSVNAQEYEAASAVAAVERARAQAKQAG---------------------------- 120

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                         L  ++ L     VS   ++Q       +  EL     + +     +
Sbjct: 121 ------------DTLRRLEKLLPGGYVSAESVDQARTAQRSTGAELNSARLQAQRAAAAV 168

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           + +                          A+  +++ I E   E   + +P  G +   +
Sbjct: 169 SGVDALVAQR-------------------AEIEAQIAIAELNLEFTEVRAPFDGRVAALR 209

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-F 363
           + +   +A   +P+  ++       I A      ++ ++ G  AT+    Y      + F
Sbjct: 210 T-TVGQFASAYKPVFTLIDACHWYVI-ANFRETDLKDIRAGTPATL----YLLSDTGRHF 263

Query: 364 KAIIEKIDPIISQQDNNL 381
           +  ++ I   ++  D   
Sbjct: 264 RGRVDSISYGVTPDDGGT 281


>gi|311067950|ref|YP_003972873.1| putative efflux permease [Bacillus atrophaeus 1942]
 gi|310868467|gb|ADP31942.1| putative efflux permease [Bacillus atrophaeus 1942]
          Length = 377

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 62/159 (38%), Gaps = 6/159 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I  +V   G +   +          G +   +V+ G ++ +GT L+++E+ +     + 
Sbjct: 46  EIGTTVMVPGTLKFSNEQYVFYEADKGTLADIKVKEGDKVEKGTALISYENEQLNLEKEQ 105

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             ++ ++ +  ID      + LN+K   L K    +E        K   +          
Sbjct: 106 NALTAESNQLQIDQINEKKNALNSKEKELTKQLGEKEA------KKQIKSERTELEMQEK 159

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           S    LK    + +S+     DLE KS +   +++ +Q+
Sbjct: 160 SAQIELKQSELQKQSLANQVADLEVKSEMEGTVIAVNQE 198


>gi|311277478|ref|YP_003939709.1| secretion protein HlyD family protein [Enterobacter cloacae SCF1]
 gi|308746673|gb|ADO46425.1| secretion protein HlyD family protein [Enterobacter cloacae SCF1]
          Length = 378

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 74/238 (31%), Gaps = 29/238 (12%)

Query: 153 FNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
           +   +  +   L   +  +      +     D E  S+    L   +Q+ L   +   + 
Sbjct: 99  YQSRVDRLQADLVTAIHNIEAMKGQLAEAIADTERVSAERDRLFKDYQRYLQGSR--AKV 156

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           N  SQ+D++   +        ++ ++  Q  +   +  +                     
Sbjct: 157 NPFSQSDIDNARQNFLAQDAMVKASLANQAQIKSQLESMQ------------------NG 198

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSK 326
            Q       ++L   +   +Q TI +P  G +          YA     +P+M  +P  K
Sbjct: 199 EQSQIVSLRAQLREAQYNLDQTTIRAPSDGYVTQVLIR-PGTYAAALPLRPVMVFIPEQK 257

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYA-DIREKKFKAIIEKIDPIISQQDNNLQT 383
              I A+     +  +K G  A   F      +   K   I+  +     Q    LQ+
Sbjct: 258 RQII-AQFRQNSLLRLKPGDEAEAVFNALPGQVFTGKLDKILPVVPGGSYQAQGTLQS 314



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 52/150 (34%), Gaps = 3/150 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +G++ +   +  + I +G  L   +       +D  +  +     +I+  K  L 
Sbjct: 66  ITPQVTGVVSEVTDKQNTMIRKGEVLFKIDPARYQSRVDRLQADLVTAIHNIEAMKGQLA 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                    E+    R+    D+      + +KV  +  S +  + +  L +   +  + 
Sbjct: 126 EAIADT---ERVSAERDRLFKDYQRYLQGSRAKVNPFSQSDIDNARQNFLAQDAMVKASL 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +     S L ++ +  Q  +  ++    +
Sbjct: 183 ANQAQIKSQLESMQNGEQSQIVSLRAQLRE 212


>gi|296100544|ref|YP_003610690.1| secretion protein HlyD family protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295055003|gb|ADF59741.1| secretion protein HlyD family protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 378

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/318 (13%), Positives = 92/318 (28%), Gaps = 84/318 (26%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +G++ +   +N   I +G  L   +                  +  +D  ++ L 
Sbjct: 66  ITPQVTGVVSEVTDKNNQLIKKGEVLFKLDP--------------GRYQARVDRLQADLV 111

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
              +  DVL+                                             +    
Sbjct: 112 TATHNIDVLKA-------------------------------------------QLSEAV 128

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            +    S+    L   +Q+ L   +   + N  S++D++   +        ++ ++ EQ 
Sbjct: 129 ANTTRVSAERDRLYKDYQRYLKGSQ--AKVNPFSESDIDNARQNYLAQDALVKGSVAEQT 186

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +   ++ +                      Q   A   ++L   +   +Q  + +P  G
Sbjct: 187 QIKSQLDSMV------------------NGEQSQIASLRAQLAEAKYNLDQTVVRAPSNG 228

Query: 299 TIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            I          YA     +P+M  +P  K   + A+     +  +K G  A V F    
Sbjct: 229 YITQVLIR-PGTYAAALPLRPVMVFIPEQKRQIV-AQFRQNSLLRLKPGDEAEVVFNALP 286

Query: 357 DIREKKFKAIIEKIDPII 374
               + F   +  I P++
Sbjct: 287 ---GQVFSGKLTSILPVV 301


>gi|292490259|ref|YP_003525698.1| efflux transporter RND family, MFP subunit [Nitrosococcus
           halophilus Nc4]
 gi|291578854|gb|ADE13311.1| efflux transporter, RND family, MFP subunit [Nitrosococcus
           halophilus Nc4]
          Length = 365

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 69/198 (34%), Gaps = 23/198 (11%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L Q E  V +   +L+  + EQK     + EL  +                ++++    +
Sbjct: 96  LLQLEDSVDQ--ADLKGLLAEQK-----LGELQFQRAARLVKEKSISRSTYDESEAQLEN 148

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             +K+        +K I +P +G  +  +  +   Y      ++ ++      Y+   + 
Sbjct: 149 AQAKVAAKRALIRKKQIRAPFSGL-LGIRQVNLGEYLAPGSRIV-LLQALDPIYVDYSLP 206

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            +    + +G    +    Y       F+  I  I+P I     N        V ++   
Sbjct: 207 ERYFSSLSQGQAVFITVQAYPAQI---FEGRIIAINPGIDPASRN--------VRVR--- 252

Query: 396 LAFSDNNIELRNGFPAEV 413
             F + N+ LR G  AEV
Sbjct: 253 AIFPNPNLRLRPGMFAEV 270



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 4/105 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I+    E+G Q+ +G  LL  ED  + D  DLK +  +     +  +++A   L  + 
Sbjct: 77  GLIEAINFESGQQVEKGKLLLQLED--SVDQADLKGLLAEQKLGELQFQRAA--RLVKEK 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            +    ++  E QL +   K  +  + +    I + +  L     
Sbjct: 133 SISRSTYDESEAQLENAQAKVAAKRALIRKKQIRAPFSGLLGIRQ 177


>gi|239993824|ref|ZP_04714348.1| efflux transporter, RND family, MFP subunit [Alteromonas macleodii
           ATCC 27126]
          Length = 379

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 10/126 (7%)

Query: 205 LFEKN-AVSQNDLNQQE--RIVYKSTLELRENIH------EQKNMLRHINELYDEANLEF 255
           L E+   VS+ D+  ++  + +     EL+ ++       E   +         E  LE 
Sbjct: 91  LVEEGDVVSKGDVLARQDIQRLNARKRELQASLERANADLELARVNSERTTSLVEKKLES 150

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L E+   L   +   ++  + L  L    E+ T++SP  G +V  + F   +     
Sbjct: 151 AQRLDEVKASLNVAKAQVSEMQAALESLNVEIEKTTLISPFDG-VVNRRFFDEGSVVSAG 209

Query: 316 QPLMKI 321
            P+  I
Sbjct: 210 TPVFGI 215



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/113 (9%), Positives = 35/113 (30%), Gaps = 10/113 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD------ 118
           G +    VE G  + +G  L   +           + S++     ++  +   +      
Sbjct: 85  GQVNTLLVEEGDVVSKGDVLARQDIQRLNARKRELQASLERANADLELARVNSERTTSLV 144

Query: 119 ----FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                   + D ++ +    + Q+ +      S   ++    + S +  +  +
Sbjct: 145 EKKLESAQRLDEVKASLNVAKAQVSEMQAALESLNVEIEKTTLISPFDGVVNR 197


>gi|184156866|ref|YP_001845205.1| membrane-fusion protein [Acinetobacter baumannii ACICU]
 gi|239500750|ref|ZP_04660060.1| membrane-fusion protein [Acinetobacter baumannii AB900]
 gi|332874058|ref|ZP_08441993.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6014059]
 gi|183208460|gb|ACC55858.1| Membrane-fusion protein [Acinetobacter baumannii ACICU]
 gi|322506760|gb|ADX02214.1| membrane-fusion protein [Acinetobacter baumannii 1656-2]
 gi|323516631|gb|ADX91012.1| membrane-fusion protein [Acinetobacter baumannii TCDC-AB0715]
 gi|332737799|gb|EGJ68691.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6014059]
          Length = 446

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 79/232 (34%), Gaps = 32/232 (13%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDL 266
             ++Q D   QE  +  S   ++    ++   +  +NE   E   +   Y ++     DL
Sbjct: 87  QLIAQIDSTTQENSLKTSDANIKNLEAQRLQQIASLNEKQLEYRRQQQMYAQDATPRADL 146

Query: 267 EQNQRTFADEMSKLTILEKTRE--------------QKTILSPIAGTIVYNQSFSSSNYA 312
           E  +  +    +++  L+   E                 I++P  GT+V           
Sbjct: 147 ESAEAAYKTAQAQVKALDAQIESAKITRSTAQTNIGYTRIVAPTDGTVVAI-VTEEGQTV 205

Query: 313 QQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +Q    IV  +  +   I+A+V+   I  V+KG      F    D  ++       + 
Sbjct: 206 NANQSAPTIVKIAKLQNMTIKAQVSEADIMKVEKGQQVY--FTTLGDETKRYATLRQIEP 263

Query: 371 DPIISQQDNNLQTQE------YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            P     ++N  T        YY  +  +      + + +LR    A+V   
Sbjct: 264 APDSISSESNSTTSSTTSSAVYYNALFDVP-----NTDGKLRIDMTAQVYIV 310



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 56/150 (37%), Gaps = 10/150 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     ++ + +  SG +KK  V+ G Q+ QG  +   +     + +   
Sbjct: 46  IENNVLATGTLDA-TKLISVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSTTQENSLKTS 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +IKNL      + ++L+         EK  E R +Q +           +       +
Sbjct: 105 DANIKNLEAQRLQQIASLN---------EKQLEYRRQQQMYAQDATPRADLESAEAAYKT 155

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               +K    ++ S  + R   +      R
Sbjct: 156 AQAQVKALDAQIESAKITRSTAQTNIGYTR 185


>gi|167550385|ref|ZP_02344142.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205324541|gb|EDZ12380.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 372

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  +      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKINDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 68/174 (39%), Gaps = 17/174 (9%)

Query: 18  KRMTLLSIIGIIGLITW-SILLPI-------------EISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+++W  I  P+             E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMVSWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G  + +   L   +  +  + I   + ++  L    + +++A +    +
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNA--ERQQAAAELKLAR 127

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  +   ++ + +        +T   V    I ++   +K     + +   N
Sbjct: 128 VTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTN 181


>gi|148654150|ref|YP_001281243.1| RND family efflux transporter MFP subunit [Psychrobacter sp.
           PRwf-1]
 gi|148573234|gb|ABQ95293.1| efflux transporter, RND family, MFP subunit [Psychrobacter sp.
           PRwf-1]
          Length = 442

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 17/187 (9%)

Query: 205 LFEKNA-VSQNDLNQ------QERIVYKSTLELRENIHEQKNMLRHINELY--DEANLEF 255
           L ++ A V +  +          + + +S  EL E         R    +    E N   
Sbjct: 150 LVQEGARVKKGQVLAVFDTDAMRQQIIQSQAELAEAQSSYDLAKRDAERVLPLLEINAIS 209

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                       Q   + A   ++L       +   +++P++G I    +    +     
Sbjct: 210 QQEADRYVATANQAAASVAASKARLNNQNLNMQNAKVVAPVSGVISEKNAN-VGSVPGP- 267

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           +PL  I+        +A+V P ++  +  G    V  P       K     + +I P   
Sbjct: 268 EPLFTII-EEGKLEWQAQVDPNKVGEINIGTPVEVSLP-----NNKSVAGKVTRISPTAE 321

Query: 376 QQDNNLQ 382
                + 
Sbjct: 322 DGSRQIT 328



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 27/77 (35%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +S+ G I  E             I +  V+ G+++ +G  L  F+       I   +  +
Sbjct: 123 ISADGTISPETTSSVSGKVSGVAIDQVLVQEGARVKKGQVLAVFDTDAMRQQIIQSQAEL 182

Query: 104 KNLRCHIDTEKSALDFL 120
              +   D  K   + +
Sbjct: 183 AEAQSSYDLAKRDAERV 199


>gi|332994463|gb|AEF04518.1| HlyD family secretion protein [Alteromonas sp. SN2]
          Length = 353

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 31/207 (14%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               ELR NI E K     I  L + +            + L++ Q       ++L I E
Sbjct: 105 ARVAELRANIDEAKRQYTRIFNLRESSAAS--------EQLLDEQQARVKGLEAQLDIAE 156

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA--KVTPKQIQHV 342
              +   I +P +G ++  +  S  +  Q +  +  +     ++ ++    +   Q+  V
Sbjct: 157 AQVDDLQIRAPFSG-VLGARQVSIGSLVQPAGVITTL---DDISVVKVDFSIAENQLASV 212

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
            KG   +     Y       F   I  ID  +      +       V   I      + +
Sbjct: 213 AKGQKVSATSVAYPGET---FSGEITHIDTRLDPISRAIS------VRAIID-----NKD 258

Query: 403 IELRNGFPAEVLFTAKNTTLAQEIIHP 429
             LR G    ++       +   +I P
Sbjct: 259 QRLRPGMLLTIVV---EKRVLDTLILP 282



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 10/88 (11%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV----------SIKNLRCHIDTEKSA 116
           ++    E+G  +  G  L+   + E    +   +            I NLR      +  
Sbjct: 78  VRSVNFEDGDSVKAGQVLIQLNNNEELARVAELRANIDEAKRQYTRIFNLRESSAASEQL 137

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGK 144
           LD    +   LE   +  E Q+ D   +
Sbjct: 138 LDEQQARVKGLEAQLDIAEAQVDDLQIR 165


>gi|320178143|gb|EFW53121.1| Multidrug resistance protein A [Shigella boydii ATCC 9905]
          Length = 378

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAENKQRALGAELDEMAANTQQAKATRDKFAKEYQRYSRGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLVQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 49/152 (32%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAENKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++  ++   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYSRGSQAKVNPFSERDIDVARQNYLVQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|320155423|ref|YP_004187802.1| membrane-fusion protein [Vibrio vulnificus MO6-24/O]
 gi|319930735|gb|ADV85599.1| membrane-fusion protein [Vibrio vulnificus MO6-24/O]
          Length = 364

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 85/254 (33%), Gaps = 25/254 (9%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLE 229
           +       +DL  +++  R      +    +++   EK  AV +  +     I+ K  L+
Sbjct: 59  LAQPTARSIDLYGRTAPNRQARLGAEIAGKIVRLEVEKGQAVRKGQVIA---IIDKRDLD 115

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            R    ++   +  +     +A     +   +        +    D  + L  +E     
Sbjct: 116 YR---LQRAKAMLEVKLKEFKAAQSLKSRGLQGEVAFATAEAALVDAKANLNNVETELSN 172

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P  G I+ ++     ++     P+  ++   +   I A V+ + +QH+     A 
Sbjct: 173 TEVRAPFDG-ILDSRFVEVGDFVGIGDPVATVI-DLQKLVIEADVSERHVQHLAAKQMAQ 230

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           VR      I  +  +  I  +  + S   N               ++   ++   +  G 
Sbjct: 231 VRL-----IGGQLLQGTIRYVGQVSSPSTNTF-----------PIEIEVDNSQHRIPAGV 274

Query: 410 PAEVLFTAKNTTLA 423
            AEV  T   T+  
Sbjct: 275 SAEVQLTLDQTSAI 288



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 56/153 (36%), Gaps = 5/153 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I + +VE G  + +G  +   +       +D +    K +      E  A   L ++ 
Sbjct: 87  GKIVRLEVEKGQAVRKGQVIAIID----KRDLDYRLQRAKAMLEVKLKEFKAAQSLKSRG 142

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E AF + E  L+D     ++  +++ N  + + +  +          ++   D    
Sbjct: 143 LQGEVAFATAEAALVDAKANLNNVETELSNTEVRAPFDGILDSRFVEVGDFVGIGDPVAT 202

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
              L+ L+         +++L  K  ++Q  L 
Sbjct: 203 VIDLQKLVIEADVSERHVQHLAAKQ-MAQVRLI 234


>gi|309779190|ref|ZP_07673953.1| secretion protein HlyD [Ralstonia sp. 5_7_47FAA]
 gi|308921994|gb|EFP67628.1| secretion protein HlyD [Ralstonia sp. 5_7_47FAA]
          Length = 410

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 68/244 (27%), Gaps = 29/244 (11%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              +R   +     +   K LF+   +   DL Q E  +  +    +          R +
Sbjct: 107 QGKIRNTYAKVGDTVAKGKPLFD---IDSPDLVQAESTLISTAGTRKLTTAALARA-RQL 162

Query: 245 NELYDEANLEFANYLKEISRDLEQNQR---------TFADEMSKLTILEKTREQKTILSP 295
            E+   A  +    + +        +              +M ++    KT    T++SP
Sbjct: 163 FEIQGLAQKDLDQAISDQQAAEAAYKAAREALTVFGKTPAQMDQIVETRKTDSLLTVVSP 222

Query: 296 IAGTIVYNQSFSSSNYAQQS-QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           I+G +   +S       Q         V      +++A V       +  G    +    
Sbjct: 223 ISGQVTA-RSAQPGLLLQPGNGTAPFTVADVSTMWMQAFVPEADAPLLHVGQPVKIHVMA 281

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           +       F   I  +   +    + +       V  +I D        ELR G      
Sbjct: 282 FPGRI---FNGKITTVGASVDANTHRI------LVRSEIDDP-----KHELRPGMFTSFD 327

Query: 415 FTAK 418
            T  
Sbjct: 328 ITTG 331


>gi|222147983|ref|YP_002548940.1| HlyD family secretion protein [Agrobacterium vitis S4]
 gi|221734971|gb|ACM35934.1| HlyD family secretion protein [Agrobacterium vitis S4]
          Length = 357

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 64/173 (36%), Gaps = 11/173 (6%)

Query: 49  EILNEDNVVE-IKS----PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            +    +V   ++S      +G + +  V+ G ++  G  L   ++ E    I + +  +
Sbjct: 48  SVEISGSVKARVQSDLSFRTAGRVIERHVDVGDRVKAGDVLALLDNTEQKADIAVAQAGL 107

Query: 104 KNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           ++ +  +  +K A D    L     + +  F+   E L    G   +  + +     +  
Sbjct: 108 ESAQATMRQKKLAFDRYKVLIQTNTIAQSTFDQAREDLATAQGSLQTAQANLATAQDAMT 167

Query: 161 YRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           Y  LK     +   RSI + ++    +++L  A          M +  F + A
Sbjct: 168 YTELKADADGIITSRSIEVGQVVSAAQAALTLAHDGPRDAVFDMFEAFFLEGA 220


>gi|60681104|ref|YP_211248.1| HlyD family transporter [Bacteroides fragilis NCTC 9343]
 gi|253563130|ref|ZP_04840587.1| HlyD family transporter [Bacteroides sp. 3_2_5]
 gi|60492538|emb|CAH07309.1| putative HlyD-family transporter component [Bacteroides fragilis
           NCTC 9343]
 gi|251946906|gb|EES87188.1| HlyD family transporter [Bacteroides sp. 3_2_5]
          Length = 415

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 67/202 (33%), Gaps = 25/202 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+    L L+ +   L   L+  Q+       L +
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQEHLRLKQERIGLNKELAVKQRRYEQYSRLIK 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  +++ +          +  +L             I+E   + N    + +  +  ++ 
Sbjct: 168 EQLIAEEEFRLAAEEYEAARAQLE-----------VIDERIRQDNFFRESQVHSLDENIR 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+ A    +        E   + +PI G +    +          + + +I+     
Sbjct: 217 NMKRSLALVRER-------VENLKVKAPIDGQVGNLDA-QIGQSIAAGEHIGQIITPD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTAT 349
             ++A++    ++ V  G  A 
Sbjct: 267 LKVQAQIDEHYVERVVPGLPAD 288



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/213 (11%), Positives = 73/213 (34%), Gaps = 17/213 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G+++  + ++ + +   G +++   E G+ +  G  +L   +       +++   +
Sbjct: 62  IRVIGQVMP-NRIIYMDAIEGGRVEERLKEEGAIVKAGDVILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++  ++N R  ++ E   L       +  E A + R  +    L K      + F   
Sbjct: 121 AYQENELRNTRISMEQEHLRLKQERIGLN-KELAVKQRRYEQYSRLIKEQLIAEEEFRLA 179

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                 +          I  +    E++   L   + + ++ L +++         + + 
Sbjct: 180 AEEYEAARAQLEVIDERIRQDNFFRESQVHSLDENIRNMKRSLALVRE--------RVEN 231

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            + +  +      L   I +      HI ++  
Sbjct: 232 LKVKAPIDGQVGNLDAQIGQSIAAGEHIGQIIT 264


>gi|325299007|ref|YP_004258924.1| efflux transporter, RND family, MFP subunit [Bacteroides
           salanitronis DSM 18170]
 gi|324318560|gb|ADY36451.1| efflux transporter, RND family, MFP subunit [Bacteroides
           salanitronis DSM 18170]
          Length = 340

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 51/183 (27%), Gaps = 17/183 (9%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
             K  L    + Y     E  +          + Q       S   + +K  +   + +P
Sbjct: 100 AAKATLVQAEDAYRRMK-ELHDKGSLPEIQWVEVQSKLQQARSMEEVAQKNLKDCKLYAP 158

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +G I   +S            + K+V       ++  V   +I  +     A ++ P  
Sbjct: 159 FSGVIAD-KSVEVGQNVVPGMAVGKLV-GVSQLKVKIAVPEAEIGSIALRQQAVIKVPAL 216

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            D               +  +          YEV L +TD      +  L  G  AEV  
Sbjct: 217 GDKVF---------ASVVSEKGIVANPMSRSYEVKLDVTD-----TDGSLMPGMVAEVSL 262

Query: 416 TAK 418
              
Sbjct: 263 AGG 265


>gi|322387563|ref|ZP_08061172.1| SMC structural maintenance of chromosomes partitioning protein
           [Streptococcus infantis ATCC 700779]
 gi|321141430|gb|EFX36926.1| SMC structural maintenance of chromosomes partitioning protein
           [Streptococcus infantis ATCC 700779]
          Length = 1179

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 81/217 (37%), Gaps = 17/217 (7%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +  +       +D+    I+  +  +D  +  L+ +        +  +  EE+      K
Sbjct: 216 IELDGQRKAIYLDVLVAQIQANKAELDLTEEELNQVQELLTNYYQKRQELEEENQSLKKK 275

Query: 145 YHSTCSKVFNYG---------ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR----AL 191
            H   +++             IS + R L +       + LN+ + + + + L     AL
Sbjct: 276 RHDLQAEMSKDQSTLMDLTALISELERKLALSKLETEQVALNQQEAQARLASLDEKRNAL 335

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +   ++    +  L E  AV+  +LN+ E  +   + +  + I + +         + + 
Sbjct: 336 IQEKEEKEANLSQLEENLAVNTKELNRLEAELEAFSDDPDQMIEQLRERFV----AFLQE 391

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             + +N L  I  DLE +++    +  +L  L++   
Sbjct: 392 EADVSNQLTRIENDLENSRQQTQKQEEQLESLKEQLA 428


>gi|301118604|ref|XP_002907030.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262108379|gb|EEY66431.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 6248

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 70/206 (33%), Gaps = 1/206 (0%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            DIE    ++ ++            E+        + + L  A     E+    + +  + 
Sbjct: 4718 DIEKALQLEEQQELGAIEHERAVKERELDVEAAQEKERLANALREAHERGAADIERQLAA 4777

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            C +  +   + +  +L+ +  R       RL+   +        ++ Q        + ++
Sbjct: 4778 CKQAHDIESTKLDETLRAERARQELALKQRLNARRQRIRASGGNATDQDSSDAETAIEQE 4837

Query: 209  NAVSQNDLNQQERIVYKSTLELREN-IHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
              V+Q +L  QER+  +   E ++  +      L    E    A L+     +   + LE
Sbjct: 4838 AEVAQAELADQERVARQQLAERQQQELSVVARQLEKEAEAQRRAALDVQAAAERELKRLE 4897

Query: 268  QNQRTFADEMSKLTILEKTREQKTIL 293
            +        + +L + ++   +  + 
Sbjct: 4898 EEHSRERRALQELLLGDQRMRETQLR 4923



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 24/233 (10%)

Query: 72   VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            V    +  +   L     +      +   + + +    ++ E+   ++        E AF
Sbjct: 4599 VREIRREKETELLAQVCALSANKAAEEAALMLLDA-ARLEAERVRAEY--------EAAF 4649

Query: 132  ESREEQLLD--FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             SR +Q  D   + +  +   +    G+ S    L  +    ++    R  LE+K    R
Sbjct: 4650 TSRVQQPEDDGSVDREIALVQRAHARGVKSRRDQLDAETAARKAALTAR--LEHKRRAAR 4707

Query: 190  ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                S + +  + K L       Q +L   E        EL     ++K  L +      
Sbjct: 4708 KGDESGKTEADIEKAL---QLEEQQELGAIEHERAVKERELDVEAAQEKERLANALREAH 4764

Query: 250  EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR--------EQKTILS 294
            E             +     + T  DE  +     +           ++ I +
Sbjct: 4765 ERGAADIERQLAACKQAHDIESTKLDETLRAERARQELALKQRLNARRQRIRA 4817



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 68/209 (32%), Gaps = 22/209 (10%)

Query: 108  CHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
              +  E         +    E A   R   ++L +   K H    K  + G+S   +SL+
Sbjct: 5007 ARVAAEFDRHRGDAQQLQTAEAAHSKRKLADRLAEKKNKRHLQQQKHESDGVSVAAKSLE 5066

Query: 166  MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
             +  R+R        L        A  +  ++ L   +   E++   +    +++RI   
Sbjct: 5067 DEAVRLRLEAQIESQLAACRDAHDAEAAKLRESLQAERERQERSLQDRIARRKEKRISQA 5126

Query: 226  S---------TLELRENIHEQKNMLR-----------HINELYDEANLEFANYLKEISRD 265
            +           EL++   E+  +              I    +EA        ++  R+
Sbjct: 5127 TAKADVKVAEEAELKQQQEEEAALAAALAAQEKEAWDAIQRKQEEAVRALQERKQQQERE 5186

Query: 266  LEQNQRTFADEMSKLTILEKTREQKTILS 294
              + Q+  A +       E  RE + + +
Sbjct: 5187 RAELQQQVAQQEMNRLQEEHERELRALTA 5215



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 18/173 (10%), Positives = 60/173 (34%), Gaps = 5/173 (2%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLDFLGKYHSTCSK 151
                + ++ S+++       ++ +         V E+A  + ++E+         +   +
Sbjct: 5101 QAERERQERSLQDRIARRKEKRISQATAKADVKVAEEAELKQQQEEEAALAAALAAQEKE 5160

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             ++        +++    R +     R +L+ + +  +  ++  Q++    + L    A 
Sbjct: 5161 AWDAIQRKQEEAVRALQERKQQQERERAELQQQVA--QQEMNRLQEEHE--RELRALTAS 5216

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
               +  +QE  + +   + R     Q+       + +     E A  + E  +
Sbjct: 5217 LAQEQTRQEEKLQQRIAQRRARKQRQEEEASAKAQQHSADAEEEARLVAEREK 5269



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 74/222 (33%), Gaps = 12/222 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSAL------DFLNNKYDVLEKAFESREEQLLDF 141
            ++ +    ++       N R  I   + AL      D L  K + L+   ++   ++ D 
Sbjct: 3318 DNADIIAQLNDVYSQAWNDRARILAMEDALKKEQLNDRLRRKRNALKHDIDAASSEIKDD 3377

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH---QKD 198
            + +         +            +L +  +   NR   + K    +  ++      + 
Sbjct: 3378 VLEEVVKKQDDMDLLQQEAVDRAVERLRQQVADCKNRGAADEKDGFQQDGINEVVKTARH 3437

Query: 199  LTMMKNLFEKNAVS--QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                  +  +  ++  +++L + +         LRE+I  ++  L    +    A     
Sbjct: 3438 FAEADKVQAEKVIAHAEDELQKLKGEYDHDLKTLREDIENERLRLNAKMQRALAAKRRRG 3497

Query: 257  NYLKEISRDLEQ-NQRTFADEMSKLTILEKTREQKTILSPIA 297
               +E+   LE+       +  +K   L++  E +   S IA
Sbjct: 3498 TPKEELETQLEEFTDTALEELRTKHFELQQKMEAEKAQSAIA 3539



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 61/205 (29%), Gaps = 2/205 (0%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +I+ +  +  + + + +L+       +      +K D L+ A E+  +Q  +   K   +
Sbjct: 4363 EIDASAAVAARSLRLASLQAKEQATDTLTATFASKGDDLDAALEATRKQHDEAQRKLRES 4422

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              ++       + +    +    R      +            L    +     +     
Sbjct: 4423 L-EMERRKQEQLLQERLRQRRAARKAETEPIPTHGSEKAEEEELERELEAKLCAEEAQAW 4481

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL-E 267
             A+ + +  + E I+          + + +   R   E  +   LE    L E+   L  
Sbjct: 4482 TALREREQQEVEAILGPLDAAAGHRLDDAELAERRAREELERLALEHDRRLAELRDSLAA 4541

Query: 268  QNQRTFADEMSKLTILEKTREQKTI 292
              +R       KL      R    I
Sbjct: 4542 DKKRQQLALREKLRRKRDQRRADGI 4566



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 61/203 (30%), Gaps = 12/203 (5%)

Query: 93   TDLID-LKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             D +D         L   ++ ++ A    D        +EKA +  E+Q L  +    + 
Sbjct: 4681 RDQLDAETAARKAALTARLEHKRRAARKGDESGKTEADIEKALQLEEQQELGAIEHERAV 4740

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              +  +   +     L   L          ++ +  +      + S + D T+      +
Sbjct: 4741 KERELDVEAAQEKERLANALREAHERGAADIERQLAACKQAHDIESTKLDETLRAERARQ 4800

Query: 209  NAVSQNDLN-QQERIVYKSTLELRENIHEQKNMLRH----INELYDEANLEFANYLKEIS 263
                +  LN +++RI         ++  + +  +            +        L E  
Sbjct: 4801 ELALKQRLNARRQRIRASGGNATDQDSSDAETAIEQEAEVAQAELADQERVARQQLAERQ 4860

Query: 264  RDLEQNQRTFADEMSKLTILEKT 286
               +Q     A ++ K    ++ 
Sbjct: 4861 ---QQELSVVARQLEKEAEAQRR 4880



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 66/214 (30%), Gaps = 15/214 (7%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            + +   L+++ + + R      +  L           K    R+E+  +      +   +
Sbjct: 4901 SRERRALQELLLGDQRMRETQLREKLAKKKAARR--AKGSHDRQEEDAEEAVAMAALQEE 4958

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +     + V +  + +   MR       +    S+   A     Q++   +   F+++  
Sbjct: 4959 IMQEQATVVAQERERQEAAMRLAATQLQEAAAASAKAAAASRQAQEEAARVAAEFDRHRG 5018

Query: 212  SQNDLNQQE-----RIVYKSTLE------LRENIHEQKNMLRHINELYDEANLEFANYLK 260
                L   E     R +     E      L++  HE   +      L DEA         
Sbjct: 5019 DAQQLQTAEAAHSKRKLADRLAEKKNKRHLQQQKHESDGVSVAAKSLEDEAV--RLRLEA 5076

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            +I   L   +     E +KL    +   ++   S
Sbjct: 5077 QIESQLAACRDAHDAEAAKLRESLQAERERQERS 5110



 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 53/184 (28%), Gaps = 22/184 (11%)

Query: 85   LTFEDIET--TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            +  +D+E+    L D        L+  +D E                    R+ QL + L
Sbjct: 4286 VMVDDLESELQRLHDEYDRDWGALKARLDDE-----------------TRLRKAQLAERL 4328

Query: 143  GKYHSTCSKVFNYGISSVYRSLKM-KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             +         N  +S   R +    L R        +D     +     L+S Q     
Sbjct: 4329 QRKRQAVQN--NTALSPEERRVAETALDRAAERENMEIDASAAVAARSLRLASLQAKEQA 4386

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
               L    A   +DL+       K   E +  + E   M R   E   +  L      ++
Sbjct: 4387 TDTLTATFASKGDDLDAALEATRKQHDEAQRKLRESLEMERRKQEQLLQERLRQRRAARK 4446

Query: 262  ISRD 265
               +
Sbjct: 4447 AETE 4450


>gi|239502100|ref|ZP_04661410.1| heavy metal RND efflux membrane fusion protein CzcB family protein
           [Acinetobacter baumannii AB900]
          Length = 499

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 61/171 (35%), Gaps = 24/171 (14%)

Query: 252 NLEFANYLKEISRDLEQNQRTFADEM-------SKLTILEKTREQKTILSPIAGTIVYNQ 304
             EF   L+   R L Q  R     +        ++    + +   T+ +P +G I   +
Sbjct: 173 QTEFLAVLRTGDRSLIQASRQRLQLLGIPQNVIHQVERTRRVQSNITLQAPTSGFIDSLE 232

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q L+ I   +   ++ A V  KQI  +K+G +    F  ++     K  
Sbjct: 233 VRN-GMALAMGQTLVTIKGIN-PVWLEAAVPEKQIAGIKRGMSVEANFAAFSQ----KVT 286

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  I P +      +      +V +++ + +      +L+ G  A V  
Sbjct: 287 GKVIDILPTLDTTSRTI------KVRIELPNPS-----GQLKPGMFASVNI 326


>gi|323138959|ref|ZP_08074020.1| secretion protein HlyD family protein [Methylocystis sp. ATCC
           49242]
 gi|322395805|gb|EFX98345.1| secretion protein HlyD family protein [Methylocystis sp. ATCC
           49242]
          Length = 358

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 52/153 (33%), Gaps = 6/153 (3%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIE---ISVSSSGEILNEDNVVEIKSPFSGIIK 68
           N      R+ L   I +     W  L P        S++G I   +  ++I +   G I 
Sbjct: 5   NVRTWAMRLALAVTIAVAAYFAWEKLKPQTLPPGIASANGRIEATE--IDIATKIPGRID 62

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +   + G  +  G  L+  +       +   +   +    ++D  ++ +     + +   
Sbjct: 63  RILADEGDFVNAGQVLVEMDTQTLRAQLRQAQADHRRAELNVDATRAQVVQRKAENEAAL 122

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                R+ +L D   +      ++   G ++V 
Sbjct: 123 AGRAQRQAEL-DAAQRRFERSKQLVKRGTAAVE 154


>gi|313682033|ref|YP_004059771.1| secretion protein hlyd family protein [Sulfuricurvum kujiense DSM
           16994]
 gi|313154893|gb|ADR33571.1| secretion protein HlyD family protein [Sulfuricurvum kujiense DSM
           16994]
          Length = 261

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 74/234 (31%), Gaps = 24/234 (10%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
           ++ S  + L +   K++   K   E   ++Q +L+ Q  +       L+ N+   K +L 
Sbjct: 50  SRVSKGQLLYTIDSKEIDSAKTQVELG-IAQAELSLQ--MYQNQYANLQLNLERNKRLLT 106

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                  E         K +   +   +R      ++L  +        + +P  G +V 
Sbjct: 107 QDMVSKFEVEN-LELSKKNLQNMIAIGERQVNQAKARLQEVNNQYNYLRVTAPNNGVVVA 165

Query: 303 NQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                    A    P   IV        I  +V    +Q V  G    V  P    +   
Sbjct: 166 KNI-KVGEMAMPGMPA--IVLSDLNALKIEVEVAENNLQLVPMGKKVKVTIPSVNYV--- 219

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                I ++  II    +N  T  +    +K++  A       +  G  A V  
Sbjct: 220 ----GIGRVSAII--PSSNPMTHTF---RIKVSFSAKQ----TVYPGMYATVDI 260



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 3/131 (2%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG ++  DN   I S   G +    V  GS++ +G  L T +  E        ++ I   
Sbjct: 22  SGSVI-SDNQKMITSRNMGFVTSVNVSEGSRVSKGQLLYTIDSKEIDSAKTQVELGIAQA 80

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              +   ++    L    +  ++     ++ +  F  +      K     I+   R +  
Sbjct: 81  ELSLQMYQNQYANLQLNLERNKRLLT--QDMVSKFEVENLELSKKNLQNMIAIGERQVNQ 138

Query: 167 KLTRMRSIYLN 177
              R++ +   
Sbjct: 139 AKARLQEVNNQ 149


>gi|256421720|ref|YP_003122373.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
 gi|256036628|gb|ACU60172.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
          Length = 416

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 60/196 (30%), Gaps = 18/196 (9%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-LEFANYLKEISRDLEQNQRT 272
            D  Q ++   +S  +L     E +      +E  +    L+ A    ++++  E   R 
Sbjct: 120 QDYVQLQQDYLESKSQLELTDAEYERQQTLASENVNSKKVLQQAKAQYQVAQARESAFRQ 179

Query: 273 FADEM---SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               +   +        R +  + SP++G +          +   +  + +IV      +
Sbjct: 180 RLQLINIDASSLTPSNIRSRVNVYSPVSGYVTKVNVNG-GKFVNPNDVMFEIV-DGADLH 237

Query: 330 IRAKVTPKQIQHVKKGYTATVRFP---------HYADIREKKF-KAIIEKIDPIISQQDN 379
           +   V  K    VK G    VRF              +  ++        +  I      
Sbjct: 238 VELNVFEKDAVMVKPGQ--RVRFTLAGETTEQIATVQLVGREIRPDKTVTVHAIADGGSK 295

Query: 380 NLQTQEYYEVILKITD 395
                 Y + +++  +
Sbjct: 296 AFLPGTYLKALIETGE 311



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 6/128 (4%)

Query: 40  IEISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED---IETTDL 95
           I   +  +G I +   N+  + +   GIIK   +  GS + +G  +   E+   ++    
Sbjct: 69  ISGLLKVNGYIDVPPQNLASVTTQMGGIIKSTPLLQGSTVKKGEVIAVLENQDYVQLQQD 128

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
               K  ++      + +++      N   VL++A    + Q+            ++ N 
Sbjct: 129 YLESKSQLELTDAEYERQQTLASENVNSKKVLQQA--KAQYQVAQARESAFRQRLQLINI 186

Query: 156 GISSVYRS 163
             SS+  S
Sbjct: 187 DASSLTPS 194


>gi|157107709|ref|XP_001649902.1| phd finger protein [Aedes aegypti]
 gi|108879514|gb|EAT43739.1| phd finger protein [Aedes aegypti]
          Length = 2274

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 63/194 (32%), Gaps = 3/194 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTCS 150
                + + V  K L    + E+  +       +    A E R  EE+ L    +      
Sbjct: 1536 KAAEEKRLVEEKRLAAEKEAEEKRIAEEKRLAEEKRIAEEKRLAEEKRLAEEKRLAEEKR 1595

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  ++   R  + K             L  +  L      + +K L   K L E+  
Sbjct: 1596 LAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKR 1655

Query: 211  VSQN-DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +++   L ++ R+  +  L   +   E +       E    A  + A   +  +  + + 
Sbjct: 1656 LAEEKRLAEERRLAEEMRLAAEKAAEEMRLAAEREAEEKRLAAEKEAEEKRLAAEKIAEE 1715

Query: 270  QRTFADEMSKLTIL 283
            +R  A++ ++   L
Sbjct: 1716 KRLAAEKKAEEKRL 1729



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 70/220 (31%), Gaps = 8/220 (3%)

Query: 78   ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK-----SALDFLNNKYDVLEKAFE 132
            +   + L +  +   +  +D +    +  R   + EK               +    A E
Sbjct: 1476 VEAPSKLASIRNRRKSVFVDFEWEKKEKERLAAEAEKMIKEAQQKKKAEKAAEEKRLAAE 1535

Query: 133  SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
               E+      K  +   +     I+   R  + K             L  +  L     
Sbjct: 1536 KAAEEKRLVEEKRLAAEKEAEEKRIAEEKRLAEEKRIAEEKRLAEEKRLAEEKRLAEEKR 1595

Query: 193  SSHQKDLTMMKNLF-EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM--LRHINELYD 249
             + +K L   K L  EK    +  L +++R+  +  L   + + E+K +   + + E   
Sbjct: 1596 LAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKR 1655

Query: 250  EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             A  +     + ++ ++       A+EM      E   ++
Sbjct: 1656 LAEEKRLAEERRLAEEMRLAAEKAAEEMRLAAEREAEEKR 1695



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 59/215 (27%), Gaps = 10/215 (4%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-NKYDVLEKAFESREEQLLDFLGKYH 146
            E+    +   L +         +  EK   +     +   L +     EE+ L    +  
Sbjct: 1556 EEKRIAEEKRLAEEKRIAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLA 1615

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                      ++   R  + K             L  +  L      + ++ L     L 
Sbjct: 1616 EEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEEKRLAEERRLAEEMRLA 1675

Query: 207  EKNAVSQNDLN-----QQERIVYKSTLE----LRENIHEQKNMLRHINELYDEANLEFAN 257
             + A  +  L      +++R+  +   E      E I E+K +                 
Sbjct: 1676 AEKAAEEMRLAAEREAEEKRLAAEKEAEEKRLAAEKIAEEKRLAAEKKAEEKRLAAAAKK 1735

Query: 258  YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +    +L +     A  + K+   E    Q T+
Sbjct: 1736 AAELQEAELRRIAAEKAAILEKVMAEEILASQSTL 1770


>gi|169797228|ref|YP_001715021.1| HlyD family secretion protein [Acinetobacter baumannii AYE]
 gi|213155978|ref|YP_002318023.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii AB0057]
 gi|215484669|ref|YP_002326904.1| MacA [Acinetobacter baumannii AB307-0294]
 gi|301346497|ref|ZP_07227238.1| MacA [Acinetobacter baumannii AB056]
 gi|301509987|ref|ZP_07235224.1| MacA [Acinetobacter baumannii AB058]
 gi|301594198|ref|ZP_07239206.1| MacA [Acinetobacter baumannii AB059]
 gi|332851267|ref|ZP_08433340.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6013150]
 gi|332866136|ref|ZP_08436851.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6013113]
 gi|88758884|emb|CAJ77825.1| putative RND family drug transporter [Acinetobacter baumannii AYE]
 gi|169150155|emb|CAM88049.1| putative secretion protein (HlyD family) [Acinetobacter baumannii
           AYE]
 gi|213055138|gb|ACJ40040.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii AB0057]
 gi|213986253|gb|ACJ56552.1| MacA [Acinetobacter baumannii AB307-0294]
 gi|332730147|gb|EGJ61474.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6013150]
 gi|332734777|gb|EGJ65871.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6013113]
          Length = 445

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 79/232 (34%), Gaps = 32/232 (13%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDL 266
             ++Q D   QE  +  S   ++    ++   +  +NE   E   +   Y ++     DL
Sbjct: 87  QLIAQIDSTTQENSLKTSDANIKNLEAQRLQQIASLNEKQLEYRRQQQMYAQDATPRADL 146

Query: 267 EQNQRTFADEMSKLTILEKTRE--------------QKTILSPIAGTIVYNQSFSSSNYA 312
           E  +  +    +++  L+   E                 I++P  GT+V           
Sbjct: 147 ESAEAAYKTAQAQVKALDAQIESAKITRSTAQTNIGYTRIVAPTDGTVVAI-VTEEGQTV 205

Query: 313 QQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +Q    IV  +  +   I+A+V+   I  V+KG      F    D  ++       + 
Sbjct: 206 NANQSAPTIVKIAKLQNMTIKAQVSEADIMKVEKGQQVY--FTTLGDETKRYATLRQIEP 263

Query: 371 DPIISQQDNNLQTQE------YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            P     ++N  T        YY  +  +      + + +LR    A+V   
Sbjct: 264 APDSISSESNSTTSSTTSSAVYYNALFDVP-----NTDGKLRIDMTAQVYIV 310



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 56/150 (37%), Gaps = 10/150 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     ++ + +  SG +KK  V+ G Q+ QG  +   +     + +   
Sbjct: 46  IENNVLATGTLDA-TKLISVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSTTQENSLKTS 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +IKNL      + ++L+         EK  E R +Q +           +       +
Sbjct: 105 DANIKNLEAQRLQQIASLN---------EKQLEYRRQQQMYAQDATPRADLESAEAAYKT 155

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               +K    ++ S  + R   +      R
Sbjct: 156 AQAQVKALDAQIESAKITRSTAQTNIGYTR 185


>gi|332084775|gb|EGI89958.1| hlyD family secretion family protein [Shigella boydii 5216-82]
          Length = 328

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 55/155 (35%), Gaps = 11/155 (7%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI-------KNLRCHID 111
           I    +GI+ +   +N   I +G  L   + +     +D  +  +       K LR  + 
Sbjct: 66  ITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQARVDRLQADLMTATHNIKTLRAQLT 125

Query: 112 TEKSALDFLNNKYDVL----EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++    ++ + D L    ++  +  +  +  F  +      + F    + V  S+  +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                 +       +++   LRA L+  + +L   
Sbjct: 186 AQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQT 220


>gi|323174245|gb|EFZ59873.1| hlyD family secretion family protein [Escherichia coli LT-68]
          Length = 378

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSHAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/152 (10%), Positives = 49/152 (32%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +    H+  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSHAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|297539413|ref|YP_003675182.1| secretion protein HlyD family protein [Methylotenera sp. 301]
 gi|297258760|gb|ADI30605.1| secretion protein HlyD family protein [Methylotenera sp. 301]
          Length = 290

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 77/219 (35%), Gaps = 30/219 (13%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  + Q + +V +  +EL   + + K      +++  + N E ++ +          +  
Sbjct: 84  KTAVAQTKALVEQRKVELTMKLGQAKRRAEIDDQVISQENREDSSLIA------TSARAE 137

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           +   +++L + +    +  + SP+ G +         ++AQ   P + ++      ++  
Sbjct: 138 YEAALAELDLAKLNLSRTVVRSPVDGWVSNLVVR-PGDFAQIGAPKLAVI-DQHSFWVYG 195

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-------- 384
                ++  ++ G  A +R      I     K  +E     I+ +DN    +        
Sbjct: 196 YFEEHKLALMQVGDPAEIRLISSNQI----LKGHVESFARGITDRDNPTDVRLLANVNPS 251

Query: 385 -------EYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                  +   V + + ++     N+ L  G    V+  
Sbjct: 252 FNWVRLSQRVPVRITLDEI---PKNLTLVAGMTCTVIVH 287



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 56/158 (35%), Gaps = 5/158 (3%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
           +L +        +TL+    I+G + W     ++   +  G +  +  +V I    +G++
Sbjct: 3   DLSKKLIRLSITLTLVIAAIILGRMLWVRY--MDSPWTRDGRVRAD--IVNIAPDVNGLV 58

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               V +   + +G  L T +       +   K  ++  +  + T K        + D  
Sbjct: 59  TSVAVRDNQFVHRGDVLFTVDTEHYKTAVAQTKALVEQRKVEL-TMKLGQAKRRAEIDDQ 117

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
             + E+RE+  L          + +    ++ +  S  
Sbjct: 118 VISQENREDSSLIATSARAEYEAALAELDLAKLNLSRT 155


>gi|258515179|ref|YP_003191401.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257778884|gb|ACV62778.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 377

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 59/205 (28%), Gaps = 17/205 (8%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           DL Q      +  L+  +   E+   L     +      +  + L     +L  +Q    
Sbjct: 109 DLAQANLERAQQALKDAQVNFERNKSLYEAQAISKSQYEQAESGLVTAQSNLNVSQAQLK 168

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              + L   +      T+ SPI G +      S           + +V  +    ++  V
Sbjct: 169 QAQATLNSAQDNHNNFTLTSPIDGVVAAVNVDS-GEITSPQASPITVVQINST-KVKVNV 226

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   +  +K G    V          K     +  + P                      
Sbjct: 227 SENVVDSIKVGSKVPVTINAIN----KTINGNVLSVAPKADPATRAFTV----------- 271

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
           ++   ++  E++ G  A++  +  +
Sbjct: 272 EIQLPNDKGEIKPGMVAKLNLSTGS 296



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 52/131 (39%), Gaps = 3/131 (2%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +GEI+   +V  +    +G +++  V+ G  + +G  LL  E+ +  + +D     +   
Sbjct: 53  TGEIIAGADV-NVMPKVTGRVQQVMVKVGDTVHKGQTLLQLEENDAKNSLDQAGAGLDLA 111

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           + +++  + AL      ++  +  +E++      +        +   N  +S     LK 
Sbjct: 112 QANLERAQQALKDAQVNFERNKSLYEAQAISKSQYEQAESGLVTAQSNLNVSQ--AQLKQ 169

Query: 167 KLTRMRSIYLN 177
               + S   N
Sbjct: 170 AQATLNSAQDN 180


>gi|224539336|ref|ZP_03679875.1| hypothetical protein BACCELL_04241 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519055|gb|EEF88160.1| hypothetical protein BACCELL_04241 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 345

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 67/217 (30%), Gaps = 17/217 (7%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDL 266
             +++ D    +  +            E +   +    N+   E  L      ++   + 
Sbjct: 86  QLIAEMDKVTLQSELASQKATYDGAKAEYEYQQKNYERNKGLHEKQLISDTDYEQSLYNY 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           ++ +  F    + L   E+     TI SPI G ++  +                L  I  
Sbjct: 146 QKAKSAFDSSKASLAKAERNLSYATITSPIDGVVIS-RDVEEGQTVASGFETPTLFTIAA 204

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNN 380
                 + A V    I  V++G   +     Y +     F+  + +I       S     
Sbjct: 205 DLTQMQVVADVDEADIGDVEEGQRVSFTVDAYPND---VFEGKVTQIRLGATSSSSSTTT 261

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
             T   YEV++     +  + +++L+    A +    
Sbjct: 262 TTTVVTYEVVI-----SAHNPDLKLKPRLTANITIYT 293



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 64/180 (35%), Gaps = 18/180 (10%)

Query: 23  LSIIGIIGLITWSI-----------------LLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           + +I + G+  W+                     I  SV+++G I     V E+ +  SG
Sbjct: 11  VGVIIVAGIAIWAFGGQAKKRKVVYETATVDRANISNSVTATGTIEPVTEV-EVGTQVSG 69

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           II +   +  S + +G  +   + +     +  +K +    +   + ++   +     ++
Sbjct: 70  IIDRLYADYNSVVTKGQLIAEMDKVTLQSELASQKATYDGAKAEYEYQQKNYERNKGLHE 129

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
               +    E+ L ++     +  S   +   +    S     + +  + ++R   E ++
Sbjct: 130 KQLISDTDYEQSLYNYQKAKSAFDSSKASLAKAERNLSYATITSPIDGVVISRDVEEGQT 189


>gi|254249331|ref|ZP_04942651.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
 gi|124875832|gb|EAY65822.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
          Length = 1046

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 74/222 (33%), Gaps = 10/222 (4%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E +L     +     S+  +  + +   +      ++          +  ++  RA  + 
Sbjct: 234 EPRLSREGRRCAGPPSRAADATLQAEQAAAATLDAQIGQQRSQIAQADADAAAARAEAAR 293

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
              D T  K L  ++A S     Q      K+  EL       +        +  +    
Sbjct: 294 RDADATRYKQLLAESAASGQRWEQAHADALKARAELTRAGAAVR--------VQTDQQTV 345

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                ++ +  + Q +   A   +KL + +   +   I +   G++   ++  +  Y + 
Sbjct: 346 LQRRREQSTAAIAQARARLAAAQAKLALAQLDLDHTVIRATRDGSV-GQRAVRAGQYVEV 404

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
             PL+ +VP S +  + A     Q+  +  G    +    Y+
Sbjct: 405 GMPLLAVVPLSDVYVV-ANFKETQLGAMHDGQPVQMDVDTYS 445


>gi|117924454|ref|YP_865071.1| hypothetical protein Mmc1_1154 [Magnetococcus sp. MC-1]
 gi|117608210|gb|ABK43665.1| conserved hypothetical protein [Magnetococcus sp. MC-1]
          Length = 490

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 82/193 (42%), Gaps = 12/193 (6%)

Query: 1   MHHFMWKNLKRNHP--ASLKRMTL---LSIIGIIGLITWSILLPIEISVSSSGEILNEDN 55
           ++H   +   R +P    L  ++L   L+++G +GL+    LLP+ +SV +  E++ +  
Sbjct: 201 LNHLQLQKQHRKNPLLTFLGDLSLYKKLALVGAVGLM----LLPVRLSVLAPSEVVAKT- 255

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI--DTE 113
              + +P  G++K+  V+    +  GTPL T +D    +  ++ +  ++  R       +
Sbjct: 256 PFMVNAPIDGVVKEILVQPNQLVEPGTPLFTLDDTTIRNNYEVARQGLEVARAEHSKAAQ 315

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++  D  +        A   ++ + +++  +           G  +++ ++   + +   
Sbjct: 316 QAFWDAESKAQLEWLTAQVEKKREEMEYNAELLQRIQVRAQRGGIAIFSNIHDWVGKPVQ 375

Query: 174 IYLNRLDLENKSS 186
           +    + L +   
Sbjct: 376 VGERVMQLADAQD 388


>gi|325293836|ref|YP_004279700.1| HlyD family secretion protein [Agrobacterium sp. H13-3]
 gi|325061689|gb|ADY65380.1| HlyD family secretion protein [Agrobacterium sp. H13-3]
          Length = 396

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 4/128 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG +   D V  I+S  +G IK      G+ + +G PL T +       +   +  + + 
Sbjct: 67  SGRLEAVDRVQ-IRSRVAGQIKAVHFREGALVKEGDPLFTIDPAPYQAAVAGAEAQVASA 125

Query: 107 RCHIDTEKSALD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +   K+ LD    L++   + +   + R+    D   +  +  S +    +   Y  
Sbjct: 126 EAKVSLAKTELDRGRRLSDNRTISQSDLDQRQSSFADAEAQLRAARSTLTTAQLDLGYTE 185

Query: 164 LKMKLTRM 171
           +   ++  
Sbjct: 186 IVAPVSGR 193



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 9/100 (9%), Positives = 30/100 (30%), Gaps = 3/100 (3%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFADEM 277
           +  V  +  ++     +       ++     ++    +   L +        +       
Sbjct: 112 QAAVAGAEAQVASAEAKVSLAKTELDRGRRLSDNRTISQSDLDQRQSSFADAEAQLRAAR 171

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
           S LT  +       I++P++G +   +  ++ N       
Sbjct: 172 STLTTAQLDLGYTEIVAPVSGRVGRIEI-TAGNLVAAGST 210


>gi|295098468|emb|CBK87558.1| Multidrug resistance efflux pump [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 354

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 55/169 (32%), Gaps = 11/169 (6%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           LL  +  I    W  L P    +     +      V      SG +    V N SQ+ +G
Sbjct: 19  LLMFVYFIVADIWIPLTPDSTVMR---VVTPVSARV------SGYVAAVHVHNNSQVKRG 69

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L   +     + ++  +++++     +  ++        +  +      +R +++   
Sbjct: 70  DLLFELDATPFRNKVEAAQIALEQ--ARLSNDQLDAQIAAAQASLKTAVLTARNDKVTFD 127

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
             +  ST   V    +  V  + +     + SI  N  +L  +      
Sbjct: 128 RYQKLSTLQSVSQADLDKVRTTWQSSEQSVSSIQANIHNLRIQRGEQDE 176


>gi|238894811|ref|YP_002919545.1| multidrug resistance secretion protein [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238547127|dbj|BAH63478.1| multidrug resistance secretion protein [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
          Length = 350

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 78/267 (29%), Gaps = 10/267 (3%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L      + +      D++    L +A ++     L       EK A      N   
Sbjct: 88  RAALAKAAGEVAAQQAALADIQATRQLQQATIAGSAASLLAATAATEKLANDNRRYNAL- 146

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                 + ++R+N            E            L  +    +Q     A   + L
Sbjct: 147 AASSAISAQIRDNASADYRRAHAEQEKAKADKTVAERQLAVLDARQQQILAALAQAQANL 206

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +         I +P  G I  N+   S ++      L+ +VP     +I A     Q+ 
Sbjct: 207 EMARLNLSYTDIRAPFDGVI-GNRRAWSGSFVSSGTQLLSLVPAHG-LWIDANFKENQLA 264

Query: 341 HVKKGYTATVRFPHYADIREKK-----FKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           H++ G   T+      +   K        A   +   + ++      T+    V ++I  
Sbjct: 265 HMRAGQPVTIVADVLPNHTFKGHVASLAPATGSRFSILPAENATGNFTKIVQRVPVRIAL 324

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNTTL 422
                    LR G    V+ T    + 
Sbjct: 325 EGDGAKLDVLRPGL--SVIVTVNEKSP 349



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 48/145 (33%), Gaps = 7/145 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              ++  I S  SG I++  V++   + +G  L+  +D +          ++      + 
Sbjct: 47  VGGDISAISSKVSGYIQQLAVQDNMAVKKGDLLIRIDDRDYRA-------ALAKAAGEVA 99

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +++AL  +     + +         LL          +    Y   +   ++  ++   
Sbjct: 100 AQQAALADIQATRQLQQATIAGSAASLLAATAATEKLANDNRRYNALAASSAISAQIRDN 159

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQ 196
            S    R   E + +     ++  Q
Sbjct: 160 ASADYRRAHAEQEKAKADKTVAERQ 184


>gi|170703862|ref|ZP_02894553.1| secretion protein HlyD family protein [Burkholderia ambifaria
           IOP40-10]
 gi|170131231|gb|EDS99867.1| secretion protein HlyD family protein [Burkholderia ambifaria
           IOP40-10]
          Length = 229

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 ++  +  +  ++ TI++P+ GT+   +S           PL+ IV      +I 
Sbjct: 37  AVVQAAAQFRLAYRNLKRTTIVAPVDGTV-GQRSVQVGQQVGPGVPLLSIV-QLNRLWIE 94

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADI 358
           A     QI+H++ G    V    Y   
Sbjct: 95  ANFKEGQIRHMRIGQPVDVVSDLYGSR 121


>gi|187928754|ref|YP_001899241.1| RND family efflux transporter MFP subunit [Ralstonia pickettii 12J]
 gi|187930013|ref|YP_001900500.1| RND family efflux transporter MFP subunit [Ralstonia pickettii 12J]
 gi|187725644|gb|ACD26809.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii
           12J]
 gi|187726903|gb|ACD28068.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii
           12J]
          Length = 384

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 70/244 (28%), Gaps = 29/244 (11%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              +R   +     +   K LF+   +   DL Q E  +  +    R+   +     R +
Sbjct: 81  QGKIRNTYAKVGDIVAKGKPLFD---IDSPDLVQAESTLISTAG-TRKLTTDALARARQL 136

Query: 245 NELYDEANLEFANYLKEISRDLEQNQR---------TFADEMSKLTILEKTREQKTILSP 295
            E+   A  +    + +        +              +M ++    KT    T++SP
Sbjct: 137 YEIQGLAQKDLDQAISDQQAAEAAYKAAREALAVFGKTPAQMDQIVQTRKTDSLLTVVSP 196

Query: 296 IAGTIVYNQSFSSSNYAQQS-QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           I+G +   +S       Q         V      +++A V       +  G    +    
Sbjct: 197 ISGQVTA-RSAQPGLLLQPGNGTAPFTVADVSTMWMQAFVPEADAPLLHVGQPVKIHVMA 255

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           +       F   I  +   +    + +       V  +I D        ELR G      
Sbjct: 256 FPSR---VFNGKITTVGASVDANTHRI------LVRSEIDDP-----KHELRPGMFTSFD 301

Query: 415 FTAK 418
            T  
Sbjct: 302 ITTG 305


>gi|170735154|ref|YP_001774268.1| RND family efflux transporter MFP subunit [Burkholderia cenocepacia
           MC0-3]
 gi|169821192|gb|ACA95773.1| efflux transporter, RND family, MFP subunit [Burkholderia
           cenocepacia MC0-3]
          Length = 324

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 61/175 (34%), Gaps = 9/175 (5%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q      ER+   +  + R  + + K       +L    NL  +  ++E    +EQ 
Sbjct: 77  VIDQARYTLAERLAEATLAQRRATLAQAKREYARNLQLG---NLVASEQVEESRTRVEQG 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           + + AD    L   +   ++ TI+SP+ G  + +++     Y    + ++ +V       
Sbjct: 134 EASVADAQVSLDTAKLNLQRTTIVSPVDGY-LNDRAPRVGEYVPAGRAVLSVV-DRNSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +       +++ +  G    +             +  ++ I   I  +D      
Sbjct: 192 VDGYFEETKLRGIHIGQPVDIIVMGEPH----ALRGHVQSIVAAIEDRDRTQGAN 242



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 61/169 (36%), Gaps = 23/169 (13%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW--------SILLPIEISVSSSGEILNEDNVVEIK 60
           +K+   ++ + +  L ++ + GL+ W        S     +  V +        +V+++ 
Sbjct: 1   MKKTWLSAGQVLLTLIVVIVAGLVLWRIINYYMFSPWTR-DGHVRA--------DVIQVA 51

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG+I   QV +  ++ +G  L   +    T    L + ++   R  +   K      
Sbjct: 52  PDVSGLITSVQVADNQEVKRGQVLFVIDQARYTLAERLAEATLAQRRATLAQAKREYAR- 110

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 L+       EQ+ +   +     + V +  +S     L ++ T
Sbjct: 111 -----NLQLGNLVASEQVEESRTRVEQGEASVADAQVSLDTAKLNLQRT 154


>gi|29345708|ref|NP_809211.1| cation efflux system outer membrane protein [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|253567696|ref|ZP_04845107.1| cation efflux system protein [Bacteroides sp. 1_1_6]
 gi|298384610|ref|ZP_06994170.1| cation efflux system protein (outer membrane protein) [Bacteroides
           sp. 1_1_14]
 gi|29337601|gb|AAO75405.1| cation efflux system protein (outer membrane protein) [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251841769|gb|EES69849.1| cation efflux system protein [Bacteroides sp. 1_1_6]
 gi|298262889|gb|EFI05753.1| cation efflux system protein (outer membrane protein) [Bacteroides
           sp. 1_1_14]
          Length = 353

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 69/202 (34%), Gaps = 16/202 (7%)

Query: 215 DLNQQERIVYKSTLELRENIH-EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +++ E I+     E    I  + K +   I E                  ++   +   
Sbjct: 89  RVSKGELIIRLEDKEYENGIAIDAKKLSLEIAEQEQSKQKALYEKGGVTMSEMRNTEVKV 148

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
            +        +   E+  + +P  G IV    +++    +Q + ++ ++      Y+   
Sbjct: 149 TNARYDYENAKLNLEKMKVKAPFDGVIVDLPHYTADTRVEQGKAMVSLM-AYDKMYMDIN 207

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +    I++VK+     +   HY  I     KA + ++ P IS +    +           
Sbjct: 208 LPESSIRYVKEAQPVYI--THY-TIPGDTLKARVGELSPAISTETRTFKG---------- 254

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
             +   ++ ++LR G  A+   
Sbjct: 255 -KILIDNDQLKLRPGMFAKADI 275


>gi|15804126|ref|NP_290165.1| hypothetical protein Z5006 [Escherichia coli O157:H7 EDL933]
 gi|15833716|ref|NP_312489.1| hypothetical protein ECs4462 [Escherichia coli O157:H7 str. Sakai]
 gi|168746872|ref|ZP_02771894.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4113]
 gi|168753401|ref|ZP_02778408.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4401]
 gi|168759674|ref|ZP_02784681.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4501]
 gi|168765996|ref|ZP_02791003.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4486]
 gi|168772456|ref|ZP_02797463.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. EC4196]
 gi|168779732|ref|ZP_02804739.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4076]
 gi|168785454|ref|ZP_02810461.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC869]
 gi|168797420|ref|ZP_02822427.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC508]
 gi|195935111|ref|ZP_03080493.1| hypothetical protein EscherichcoliO157_01425 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208806100|ref|ZP_03248437.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4206]
 gi|208812197|ref|ZP_03253526.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4045]
 gi|208820408|ref|ZP_03260728.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4042]
 gi|209400974|ref|YP_002273065.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4115]
 gi|217324438|ref|ZP_03440522.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. TW14588]
 gi|254795537|ref|YP_003080374.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli O157:H7 str. TW14359]
 gi|261224898|ref|ZP_05939179.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli O157:H7 str. FRIK2000]
 gi|261254202|ref|ZP_05946735.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli O157:H7 str. FRIK966]
 gi|291284956|ref|YP_003501774.1| Auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O55:H7 str. CB9615]
 gi|12518324|gb|AAG58729.1|AE005585_3 putative membrane protein [Escherichia coli O157:H7 str. EDL933]
 gi|13363937|dbj|BAB37885.1| putative membrane protein [Escherichia coli O157:H7 str. Sakai]
 gi|187771732|gb|EDU35576.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. EC4196]
 gi|188018357|gb|EDU56479.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4113]
 gi|189002488|gb|EDU71474.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4076]
 gi|189359260|gb|EDU77679.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4401]
 gi|189364364|gb|EDU82783.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4486]
 gi|189369582|gb|EDU87998.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4501]
 gi|189374643|gb|EDU93059.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC869]
 gi|189379961|gb|EDU98377.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC508]
 gi|208725901|gb|EDZ75502.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4206]
 gi|208733474|gb|EDZ82161.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4045]
 gi|208740531|gb|EDZ88213.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4042]
 gi|209162374|gb|ACI39807.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4115]
 gi|209755028|gb|ACI75826.1| putative membrane protein [Escherichia coli]
 gi|209755030|gb|ACI75827.1| putative membrane protein [Escherichia coli]
 gi|209755032|gb|ACI75828.1| putative membrane protein [Escherichia coli]
 gi|209755034|gb|ACI75829.1| putative membrane protein [Escherichia coli]
 gi|209755036|gb|ACI75830.1| putative membrane protein [Escherichia coli]
 gi|217320659|gb|EEC29083.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. TW14588]
 gi|254594937|gb|ACT74298.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli O157:H7 str. TW14359]
 gi|290764829|gb|ADD58790.1| Auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O55:H7 str. CB9615]
 gi|320191364|gb|EFW66014.1| Multidrug resistance protein A [Escherichia coli O157:H7 str.
           EC1212]
 gi|320639900|gb|EFX09494.1| Auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. G5101]
 gi|320645064|gb|EFX14088.1| Auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H- str. 493-89]
 gi|320650330|gb|EFX18813.1| Auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H- str. H 2687]
 gi|320655904|gb|EFX23827.1| Auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320661685|gb|EFX29100.1| Auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O55:H7 str. USDA 5905]
 gi|320666709|gb|EFX33692.1| Auxiliary transport protein, membrane fusion protein family
           [Escherichia coli O157:H7 str. LSU-61]
 gi|326337416|gb|EGD61251.1| Multidrug resistance protein A [Escherichia coli O157:H7 str. 1044]
 gi|326339941|gb|EGD63748.1| Multidrug resistance protein A [Escherichia coli O157:H7 str. 1125]
          Length = 378

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQKAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQKAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|293414960|ref|ZP_06657603.1| ydhJ protein [Escherichia coli B185]
 gi|291432608|gb|EFF05587.1| ydhJ protein [Escherichia coli B185]
          Length = 288

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 62  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 120

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 121 AEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 179

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 180 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 230

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 231 RAIYDQS 237



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 4   MSIKTIKYFSTIIVAIVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 59

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 60  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 119

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 120 SAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 159


>gi|297567979|ref|YP_003686949.1| S-layer domain protein [Meiothermus silvanus DSM 9946]
 gi|296852428|gb|ADH65441.1| S-layer domain protein [Meiothermus silvanus DSM 9946]
          Length = 673

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 63/232 (27%), Gaps = 8/232 (3%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L          L       I+     ++  ++ LD       + +      E  L     
Sbjct: 95  LARLGVAVEAKLERGDLAEIERKLALLEARQAGLD----PAALEDLKARLEEVALTATQA 150

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMM 202
              ST +     G+S     +   L R+      +     +  + LR    + ++ L  +
Sbjct: 151 LNQSTLALERLSGLSDRLDEVGQALQRLEEGQARQGQGAASDLAALRRETEALKRALEEV 210

Query: 203 KNLFEKNAVSQ--NDLNQQERIVYKSTLELRENIHEQK-NMLRHINELYDEANLEFANYL 259
           +      +  Q   ++  Q++ + +    L     EQ   M      L      E   + 
Sbjct: 211 RQTPSPGSDPQLAVEVLAQQKRLEELQGRLERLAKEQAARMEAQEARLRALEEAERPRFS 270

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
            E S    Q       E       E+   Q +I     G       +S    
Sbjct: 271 LESSLAWRQGYGYALGEEGPRVGGERVLGQLSIRGEREGKKFGLLLYSGGGV 322


>gi|326667811|ref|XP_001924014.2| PREDICTED: myosin heavy chain, fast skeletal muscle [Danio rerio]
 gi|220941698|emb|CAX15439.1| novel myosin family protein [Danio rerio]
          Length = 1937

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L ++  KY    +++   G  
Sbjct: 1416 LEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQKYEEGQAEL--EGAQ 1473

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   L+    + Q++++ +     +   S ++L +
Sbjct: 1474 KEARSLSTELFKMKNSYEETLD---QLETLKRENKNLQQEISDLTEQLGETGKSIHELEK 1530

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      EI R L +          
Sbjct: 1531 SKKAVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEIEQIKR 1590

Query: 278  --SKLTILEKTREQKTILS 294
               ++T   ++     + S
Sbjct: 1591 NSQRVTESMQSTLDSEVRS 1609



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 75/229 (32%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1208 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKN 1265

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++                  R L+ K   +  +   +     +   L+  +    
Sbjct: 1266 DENIRQINDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEV 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1326 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1386 EELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLMI 1432



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 74/226 (32%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + +  K      L   I+ E+S    L  K   L+   
Sbjct: 1058 EGDLKLAQESIMDLENDKQQSEEKLKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1117

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1118 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1171

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1172 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1226

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +       + +   +LE+  RT  D++S++        ++ 
Sbjct: 1227 KMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKNDENIRQI 1272


>gi|157375874|ref|YP_001474474.1| multidrug resistance efflux pump-like protein [Shewanella sediminis
           HAW-EB3]
 gi|157318248|gb|ABV37346.1| multidrug resistance efflux pump-like protein [Shewanella sediminis
           HAW-EB3]
          Length = 343

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 112/312 (35%), Gaps = 24/312 (7%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           +   ++K  V E+   + +   +             + Y I  +     +       +  
Sbjct: 35  IGTASSKQMVPERLLLTGKISSVKSQSFMVPKAGDAWRYQIQWMLPEGSIATPGDTVVIF 94

Query: 177 NRLDLENKSSLLRA-LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RE 232
           ++  L N+   L A LL    ++ +    L      ++ DL Q+   + KS L+     +
Sbjct: 95  DKSQLANQIEQLEASLLRVTAQEQSQSIELTSSVLQAKFDLKQKVSELDKSQLDADVPAD 154

Query: 233 NIHEQKNMLRHINELYDEANL-EFANYLKEISRDLEQNQRTFADEMSK----LTILEKTR 287
            I  +       N +  ++ L +    LKE+      ++   A + ++    L       
Sbjct: 155 YIAAKDYAENQFNLMKAKSELSKARQSLKEVLDRQTASKAQLAIDKNRANLELAQALNGL 214

Query: 288 EQKTILSPIAGTIVY------NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           EQ  + + I G ++Y       + ++  +  Q  + +  + P  +   + A V    +  
Sbjct: 215 EQLALKAEIKGPLLYSSDPWSQKKYAVGDTVQIGRQIASL-PAMEELEVVAWVNEVDVDK 273

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           +  G+  T+R    +DI    F   I+ I    +Q+     +  +++V ++       D 
Sbjct: 274 IAIGHPVTLRLDSQSDI---SFSGDIKLIGR-QAQKQVAWGSSNWFKVEIRFEP----DE 325

Query: 402 NIELRNGFPAEV 413
            +++  G    V
Sbjct: 326 RVKIIPGMSVLV 337


>gi|156935550|ref|YP_001439466.1| hypothetical protein ESA_03412 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533804|gb|ABU78630.1| hypothetical protein ESA_03412 [Cronobacter sakazakii ATCC BAA-894]
          Length = 355

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/174 (11%), Positives = 62/174 (35%), Gaps = 9/174 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWS-ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           A   R+++ + + +      + I +P+    +    +    + V      SG +    V 
Sbjct: 9   ARWVRVSIATFLAMFVYFILADIWIPLTPDSTVMRVVTPVSSRV------SGYVAAVHVA 62

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           N S + +G  L   +    T+ ++  +++++     +  E+     +  + ++      +
Sbjct: 63  NNSHVKKGDLLFELDAAPFTNRVEAAEIALRQ--ARLANEQLDAQIVAARANLNTARLTA 120

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           R +++     +  ST   V    +  V  + +     +  +     +L  +   
Sbjct: 121 RNDKVTFDRYQRLSTMQNVSQQDLDKVRTTWQTSEQAVAQLEAKINELTIERGE 174



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 65/205 (31%), Gaps = 14/205 (6%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F    +     ++     +R   L    L+ +    RA L++ +      K  F++   
Sbjct: 73  LFELDAAPFTNRVEAAEIALRQARLANEQLDAQIVAARANLNTARLTARNDKVTFDRY-- 130

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
               L+  + +  +   ++R      +  +  +    +E  +E        +  L++ + 
Sbjct: 131 --QRLSTMQNVSQQDLDKVRTTWQTSEQAVAQLEAKINELTIERGERDDNRNVTLQKYRN 188

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
              D        +       I +   GT+   Q  S   +A    P + +V         
Sbjct: 189 ALQD-------AQLNLGWTQIRAEADGTVSNLQL-SPGWFAAAGTPALALVSEHTDIV-- 238

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYA 356
           A    K ++H   G  A V F    
Sbjct: 239 ADFREKSLRHTHAGTDAAVVFDALP 263


>gi|83814905|ref|YP_444237.1| putative transport/efflux transmembrane protein [Salinibacter ruber
           DSM 13855]
 gi|83756299|gb|ABC44412.1| putative transport/efflux transmembrane protein [Salinibacter ruber
           DSM 13855]
          Length = 391

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 38/103 (36%), Gaps = 4/103 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V+ G ++  G  +   +  +    +   + +    R   +  KS    L  + 
Sbjct: 108 GTVVDLPVQEGERVEAGQLIARLDGTDAQSRLQSARATRNAARSAYERAKS----LYAQG 163

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            V ++  E+R+ +      +     ++V +  I++ +     +
Sbjct: 164 IVSQQQLEARQREYEVAQSQLEQAQTQVGDTRITAPFDGRVAE 206



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 68/209 (32%), Gaps = 16/209 (7%)

Query: 211 VSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           V + +  +  +++ +    + +  +   +         Y+ A   +A  +    + LE  
Sbjct: 115 VQEGERVEAGQLIARLDGTDAQSRLQSARATRNAARSAYERAKSLYAQGIVS-QQQLEAR 173

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           QR +    S+L   +       I +P  G +        +      QP++ +     L+ 
Sbjct: 174 QREYEVAQSQLEQAQTQVGDTRITAPFDGRVAEKMV-ELNENVGPQQPVVTV---QDLSR 229

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   +   +   +++   +      ++    ++  A +++I      +         YE 
Sbjct: 230 MEVVIDVPEQSRMRRALQSESLAVTFSMRPGRRLPATLKEITTTADPRTRT------YEA 283

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            L I       ++  +  G  A  +    
Sbjct: 284 TLTI----RPPDDAGILPGMTARAIVGGG 308


>gi|282890758|ref|ZP_06299278.1| hypothetical protein pah_c026o089 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499351|gb|EFB41650.1| hypothetical protein pah_c026o089 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 301

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 70/178 (39%), Gaps = 9/178 (5%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +++SSG +   D  +EI  P  GI++K   + G  + +G  LL  +       ++++  
Sbjct: 46  QAIASSGIVEASDKNIEIGVPEDGIVEKLWFKVGDPVHRGDALLQLDTRALRAKLEVQ-- 103

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                R +++  ++ L    ++++ ++K  + R     D   + +           +   
Sbjct: 104 -----RANVEVAEATLRKAIDQFERVKKVKDPRAVSKEDVTTRENEARVAEMRVKAAKAE 158

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                +L     +      +  K  +      S  K L M+ NL  KN   + D+++Q
Sbjct: 159 VEETTELLNRLIVRSPIDGILLKQDVRDGEFVSRNKPLLMVGNL--KNLQIRVDIDEQ 214


>gi|72391324|ref|XP_845956.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|62175949|gb|AAX70073.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70802492|gb|AAZ12397.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
            927/4 GUTat10.1]
          Length = 4334

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 61/205 (29%), Gaps = 3/205 (1%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D++    +   +  +  LR   +  ++       + DV  +     EEQL +   +    
Sbjct: 950  DVQLQGYVHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEEL 1009

Query: 149  CSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             +        +      L     ++  +     +L N        L    + L  M+   
Sbjct: 1010 RNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTEGDKARELDVQNEKLHEMEEQL 1069

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             +      +L   E    +      E +HE +  L  +    +E      +  +E+    
Sbjct: 1070 AELRAENEELRNTEGDKARELDVQNEKLHEMEEQLAELRAENEELRNTEGDKARELDVQ- 1128

Query: 267  EQNQRTFADEMSKLTILEKTREQKT 291
             +      +++++L    +      
Sbjct: 1129 NEKLHEMEEQLAELRAENEELRNTE 1153



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 59/201 (29%), Gaps = 3/201 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     +  
Sbjct: 1304 NEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTE 1363

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +      L     ++  +     +L N        L    + L  M+    +  
Sbjct: 1364 GDKARELDVQNEKLHEMEEQLAELRTENEELRNTEGDKARELDVQNEKLHEMEEQLAELR 1423

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +L   E    +      E +HE +  L  +    +E      +  +E+     +  
Sbjct: 1424 AENEELRNTEGDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQ-NEKL 1482

Query: 271  RTFADEMSKLTILEKTREQKT 291
                +++++L    +      
Sbjct: 1483 HEMEEQLAELRAENEELRNTD 1503



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 59/201 (29%), Gaps = 3/201 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     +  
Sbjct: 3092 NEKLHEMEEQLAELRAENEELRNTEGDKARELDVQNEKLHEMEEQLAELRAENEELRNTD 3151

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +      L     ++  +     +L N        L    + L  M+    +  
Sbjct: 3152 GDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELR 3211

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +L   E    +      E +HE +  L  +    +E      +  +E+     +  
Sbjct: 3212 AENEELRNTEGDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQ-NEKL 3270

Query: 271  RTFADEMSKLTILEKTREQKT 291
                +++++L    +      
Sbjct: 3271 HEMEEQLAELRAENEELRNTD 3291



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 59/201 (29%), Gaps = 3/201 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     +  
Sbjct: 2987 NEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTD 3046

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +      L     ++  +     +L N        L    + L  M+    +  
Sbjct: 3047 GDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELR 3106

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +L   E    +      E +HE +  L  +    +E      +  +E+     +  
Sbjct: 3107 AENEELRNTEGDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQ-NEKL 3165

Query: 271  RTFADEMSKLTILEKTREQKT 291
                +++++L    +      
Sbjct: 3166 HEMEEQLAELRAENEELRNTD 3186



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 59/201 (29%), Gaps = 3/201 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     +  
Sbjct: 1129 NEKLHEMEEQLAELRAENEELRNTEGDKARELDVQNEKLHEMEEQLAELRAENEELRNTE 1188

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +      L     ++  +     +L N        L    + L  M+    +  
Sbjct: 1189 GDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELR 1248

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +L   +    +      E +HE +  L  +    +E      +  +E+     +  
Sbjct: 1249 AENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTEGDKARELDVQ-NEKL 1307

Query: 271  RTFADEMSKLTILEKTREQKT 291
                +++++L    +      
Sbjct: 1308 HEMEEQLAELRAENEELRNTD 1328



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 59/201 (29%), Gaps = 3/201 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     +  
Sbjct: 1584 NEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTD 1643

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +      L     ++  +     +L N        L    + L  M+    +  
Sbjct: 1644 GDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELR 1703

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +L   +    +      E +HE +  L  +    +E      +  +E+     +  
Sbjct: 1704 AENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQ-NEKL 1762

Query: 271  RTFADEMSKLTILEKTREQKT 291
                +++++L    +      
Sbjct: 1763 HEMEEQLAELRAENEELRNTE 1783



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 59/201 (29%), Gaps = 3/201 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     +  
Sbjct: 1409 NEKLHEMEEQLAELRAENEELRNTEGDKARELDVQNEKLHEMEEQLAELRAENEELRNTD 1468

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +      L     ++  +     +L N        L    + L  M+    +  
Sbjct: 1469 GDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELR 1528

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +L   +    +      E +HE +  L  +    +E      +  +E+     +  
Sbjct: 1529 AENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTEGDKARELDVQ-NEKL 1587

Query: 271  RTFADEMSKLTILEKTREQKT 291
                +++++L    +      
Sbjct: 1588 HEMEEQLAELRAENEELRNTD 1608



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 59/201 (29%), Gaps = 3/201 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     +  
Sbjct: 2812 NEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTD 2871

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +      L     ++  +     +L N        L    + L  M+    +  
Sbjct: 2872 GDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELR 2931

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +L   +    +      E +HE +  L  +    +E      +  +E+     +  
Sbjct: 2932 AENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQ-NEKL 2990

Query: 271  RTFADEMSKLTILEKTREQKT 291
                +++++L    +      
Sbjct: 2991 HEMEEQLAELRAENEELRNTD 3011



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 59/201 (29%), Gaps = 3/201 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     +  
Sbjct: 3267 NEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTD 3326

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +      L     ++  +     +L N        L    + L  M+    +  
Sbjct: 3327 GDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQNEKLHEMEEQLAELR 3386

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +L   +    +      E +HE +  L  +    +E      +  +E+     +  
Sbjct: 3387 AENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQ-NEKL 3445

Query: 271  RTFADEMSKLTILEKTREQKT 291
                +++++L    +      
Sbjct: 3446 HEMEEQLAELRAENEELRNTD 3466



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/201 (10%), Positives = 56/201 (27%), Gaps = 3/201 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
             + +   +  +  LR   +  ++       + DV  +     EEQL +   +     +  
Sbjct: 1759 NEKLHEMEEQLAELRAENEELRNTEGDKARELDVQNEKLHEMEEQLAELRAENEELRNTD 1818

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +      L     ++  +     +L N        L    + L  M+    +  
Sbjct: 1819 GDKARELDVQNEKLHEMEEQLAELRAENEELRNTEGDKARELDVQNEKLHEMEEQLAELR 1878

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +L   +    +      E +HE +  L  +    +E      +  +E+     +  
Sbjct: 1879 AENEELRNTDGDKARELDVQNEKLHEMEEQLAELRAENEELRNTDGDKARELDVQ-NEKL 1937

Query: 271  RTFADEMSKLTILEKTREQKT 291
                  + +L    +      
Sbjct: 1938 HEMERHLQQLKEENEELRNTD 1958



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 22/197 (11%), Positives = 71/197 (36%), Gaps = 5/197 (2%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             + ID  +  +  L   +    + L  ++++ D L +  E +  +L     +  +  ++ 
Sbjct: 2584 KEQIDEGRQQLNTLEQELCELGAKLHDVSSERDDLLRLQEEKTNELAAQQARLTAVENQ- 2642

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                ++++ R  +        I ++          +   + +  +  + ++ +       
Sbjct: 2643 ----LNTLARENEELCKNNEIISVDAKKQSEYIQDVHRQMRTLSESHSNLQQICNSKTNQ 2698

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
              +LN Q R + +   EL++   + +      +      +      ++++     +N   
Sbjct: 2699 IEELNSQLRQLQQDANELQKENEQLREHEVEKSLDLCVQSGRVQELVEQLREVRTENTGI 2758

Query: 273  FADEMSKLTILEKTREQ 289
              ++ +KL  LE   +Q
Sbjct: 2759 REEQHAKLRELEVRNQQ 2775


>gi|169794840|ref|YP_001712633.1| nodulation protein [Acinetobacter baumannii AYE]
 gi|213157833|ref|YP_002320631.1| multidrug efflux protein [Acinetobacter baumannii AB0057]
 gi|215482387|ref|YP_002324569.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii AB307-0294]
 gi|301345753|ref|ZP_07226494.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii AB056]
 gi|301511533|ref|ZP_07236770.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii AB058]
 gi|301594857|ref|ZP_07239865.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii AB059]
 gi|332852294|ref|ZP_08434099.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6013150]
 gi|332870517|ref|ZP_08439281.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6013113]
 gi|88758808|emb|CAJ77867.1| NolF secretion protein [Acinetobacter baumannii AYE]
 gi|169147767|emb|CAM85630.1| nodulation protein [Acinetobacter baumannii AYE]
 gi|213056993|gb|ACJ41895.1| multidrug efflux protein [Acinetobacter baumannii AB0057]
 gi|213986976|gb|ACJ57275.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii AB307-0294]
 gi|332729424|gb|EGJ60764.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6013150]
 gi|332732254|gb|EGJ63522.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6013113]
          Length = 372

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 79/212 (37%), Gaps = 11/212 (5%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +R++  + +  +  ++      +  QK       +   N  +   L Q +  +  +  + 
Sbjct: 67  IRAVQQSSIQAQVSATATAVTANVGQKVQKGQVLVRLNNQDNAARLAQAQANLASAQAQA 126

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
               +      R +N+ +  A +EF     +    LE  +   A+    + I +K     
Sbjct: 127 ELARNLMNRKQRLLNQGFI-ARVEFEQSQVDYKGQLESVRAQQAN----VDIAKKADRDG 181

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I SPI+G +   Q           Q L +IV +     I+AK+  +Q   +K G +   
Sbjct: 182 IITSPISGVVTKRQV-EPGQTVSVGQTLFEIV-NPDQLEIQAKLPIEQQSALKVGSSIQY 239

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           +         K+  AI+ +I P+  Q    ++
Sbjct: 240 QI----QGNSKQLHAILTRISPVADQDSRQIE 267



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 39/100 (39%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I++  S          G ++ +G  L+   + +    +   + ++ + +   +  ++ ++
Sbjct: 75  IQAQVSATATAVTANVGQKVQKGQVLVRLNNQDNAARLAQAQANLASAQAQAELARNLMN 134

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                 +    A    E+  +D+ G+  S  ++  N  I+
Sbjct: 135 RKQRLLNQGFIARVEFEQSQVDYKGQLESVRAQQANVDIA 174


>gi|32476452|ref|NP_869446.1| alkaline protease secretion protein AprE [Rhodopirellula baltica SH
           1]
 gi|32446997|emb|CAD78903.1| similar to alkaline proteinase secretion protein aprE
           [Rhodopirellula baltica SH 1]
          Length = 811

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 2/109 (1%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +LR  I      L+ I       +   A   + I  +  + Q     + +KL + E+  E
Sbjct: 597 DLRGQIRTTMAELQRIRTQSRSRSQLKATERRAIELEEVEVQTKLEAQRAKLKLKEQRAE 656

Query: 289 QKTILSPIAGTIVYNQSFS--SSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              + SPI G +V  +      +   Q  Q LM+I   SK  Y+  ++ 
Sbjct: 657 DLVVRSPIDGIVVSWEVEKMLLNRPIQTGQVLMEIADLSKPMYLEIEMP 705



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 4/163 (2%)

Query: 4   FMWKNLKRNHPASLKRM---TLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK 60
            +W+ L R       R    TL  I  I  LI   I +P+E  + + G +  E       
Sbjct: 501 PVWRTLGRATWVLRARTLPKTLGVIGAIAALICGLIFIPMEFDLEADGTLKAEARREVFA 560

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
               G +++  V++ S +  G PL+   + +    ++  +  I+     +   ++     
Sbjct: 561 GID-GEVREVLVDHNSIVQAGDPLVKMINPDIGIELEDLRGQIRTTMAELQRIRTQSRSR 619

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +       +A E  E ++   L    +            V RS
Sbjct: 620 SQLKATERRAIELEEVEVQTKLEAQRAKLKLKEQRAEDLVVRS 662


>gi|134298196|ref|YP_001111692.1| RND family efflux transporter MFP subunit [Desulfotomaculum
           reducens MI-1]
 gi|134050896|gb|ABO48867.1| efflux transporter, RND family, MFP subunit [Desulfotomaculum
           reducens MI-1]
          Length = 417

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 92/276 (33%), Gaps = 50/276 (18%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +               L+  D +++  L  A L   Q D T+  +L +    S+  +   
Sbjct: 91  LVAEGDEIQKGQIIARLDDRDYQDQYQLALAKLQDAQDDDTI--SLLD----SELKIKSM 144

Query: 220 ERIVYKSTLELRE--------NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           E  + K   E +E        + +E K     ++    E       Y  + S+ L+QN+ 
Sbjct: 145 EADLEKLRDEYKEMETISDAYSTNELKMKKLELDNKEMEYQNLLKKYQLDKSKGLDQNEL 204

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                     + ++  E   + +P++G ++   +       +  + L           I 
Sbjct: 205 QV-------KMAKEDLEDTIVYAPVSGVLLNLAN-------KAGESLTD---EDDFATIH 247

Query: 332 --------AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                    KV    I  +K G    V      D   KKF  ++ KI+ +  +  + L  
Sbjct: 248 ENKTIKAITKVIEYDIGQIKVGQKVYVNVEALPD---KKFTGVVSKINALPEEDSSGLVN 304

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              Y V     ++   D   EL++G    V F  K 
Sbjct: 305 ---YSV-----EMTIKDPGPELKDGMTCSVSFVLKE 332



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 3/125 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR--CHIDTEKSALDFLNN 122
           G I +  V  G +I +G  +   +D +  D   L    +++ +    I    S L   + 
Sbjct: 85  GTIAEILVAEGDEIQKGQIIARLDDRDYQDQYQLALAKLQDAQDDDTISLLDSELKIKSM 144

Query: 123 KYDVLEKAFESRE-EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           + D+ +   E +E E + D          K+        Y++L  K    +S  L++ +L
Sbjct: 145 EADLEKLRDEYKEMETISDAYSTNELKMKKLELDNKEMEYQNLLKKYQLDKSKGLDQNEL 204

Query: 182 ENKSS 186
           + K +
Sbjct: 205 QVKMA 209


>gi|303237432|ref|ZP_07323998.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella disiens FB035-09AN]
 gi|302482382|gb|EFL45411.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella disiens FB035-09AN]
          Length = 328

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 90/237 (37%), Gaps = 21/237 (8%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A +   T++ ++ +IG  T   L   E  +   GEI   +  V  K P  G I + +V+ 
Sbjct: 13  AIIGFATVVVLVAVIGYFT---LGKEEEVI--QGEIEVSEYRVACKLP--GRITELRVKE 65

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L   E  E        +  +     +     S L    N+ ++++ A+   
Sbjct: 66  GDMVHKGDVLAVVEIPEANA-----QEKVAEATANATEALSDLTQAPNREEIIKTAYSIY 120

Query: 135 EEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           ++ L   D   K +    ++FN G+ S  +  + +          +  +E   S      
Sbjct: 121 QQALTANDVAQKTYGRLQRLFNEGVVSAQKRDEAEAA----FLTTKSAVEVALSQYELAK 176

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           S  +++    K L +  A +  ++ Q  + V K T++      E   +   + EL  
Sbjct: 177 SGKREE---TKQLAKSQAKAAREVVQVVKSVLKETVQRATADGEVSTIYPKVGELVG 230


>gi|251788037|ref|YP_003002758.1| hypothetical protein Dd1591_0389 [Dickeya zeae Ech1591]
 gi|247536658|gb|ACT05279.1| conserved hypothetical protein [Dickeya zeae Ech1591]
          Length = 439

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 59/169 (34%), Gaps = 8/169 (4%)

Query: 5   MWKNL-KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
            W  L  +      +R   L++  ++ +    + +P+  SV +  E++  +  V      
Sbjct: 158 AWLALEPQPVWRRTRRRWKLAVPLLVAVGC--LFIPVRQSVLAPAEVIPLNGRVVAAPLD 215

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G+I+ F V+    + +G  L+ F+D       D+ + ++       + E  A      +
Sbjct: 216 -GVIQAFAVQPNQGVRKGDLLVRFDDTTLKAQADVAERALNV----AEAEYRASSQRAFQ 270

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
               +   +    Q+     +     + +    I +    + +     R
Sbjct: 271 DTDSKARLDFLAAQVAQKRAERDYANALLGRTEIRAERDGIAVFADAER 319



 Score = 36.5 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 43/123 (34%), Gaps = 8/123 (6%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V + DL  +      +TL+ + ++ E+     ++ E    A+ + A    +    L+   
Sbjct: 229 VRKGDLLVR---FDDTTLKAQADVAERA---LNVAEAEYRASSQRAFQDTDSKARLDFLA 282

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-PHSKLT 328
              A + ++         +  I +   G  +  +    +    +  + LM +  P S   
Sbjct: 283 AQVAQKRAERDYANALLGRTEIRAERDGIAVFADAERWTGKPVRTGERLMDLADPASVSL 342

Query: 329 YIR 331
            I 
Sbjct: 343 RIE 345


>gi|189218111|ref|YP_001938753.1| Copper/silver efflux system membrane fusion protein
           [Methylacidiphilum infernorum V4]
 gi|161075837|gb|ABX56666.1| copper efflux pump membrane fusion protein [Methylacidiphilum
           infernorum V4]
 gi|189184969|gb|ACD82154.1| Copper/silver efflux system membrane fusion protein
           [Methylacidiphilum infernorum V4]
          Length = 469

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 64/163 (39%), Gaps = 18/163 (11%)

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
            A L   +   E  ++LE  +  ++  ++ +   +  R    + SP+ G +     +   
Sbjct: 199 RARLRVWDLDDEQIKELE--KYAWSMSVNDVRTAKGIRGTFELRSPVDGHVHEKNVY-EG 255

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
            Y    Q L++IV   +  +I A++   Q ++V  G    +RFP   +      +A I+ 
Sbjct: 256 MYFTAGQSLLRIV-DLRTVWILAELPEDQAKYVAIGLPCQIRFPALPEKIY---EAKIDF 311

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
           I P   ++   LQ      + + +      +    +  G  A+
Sbjct: 312 IQPHFEEETRRLQ------LRVVLP-----NPQHRIHPGMYAD 343


>gi|56551178|ref|YP_162017.1| RND family efflux transporter subunit MFP [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|260753176|ref|YP_003226069.1| efflux transporter RND family, MFP subunit [Zymomonas mobilis
           subsp. mobilis NCIMB 11163]
 gi|56542752|gb|AAV88906.1| efflux transporter, RND family, MFP subunit [Zymomonas mobilis
           subsp. mobilis ZM4]
 gi|258552539|gb|ACV75485.1| efflux transporter, RND family, MFP subunit [Zymomonas mobilis
           subsp. mobilis NCIMB 11163]
          Length = 389

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 88/280 (31%), Gaps = 15/280 (5%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E++   +G++       G+ + +G PL            D+ K  +     H + ++   
Sbjct: 63  EVRPQVNGVVLARYFNEGTDVKKGQPLFLINPAPYQATYDVNKAQL----AHAEAQEKTA 118

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                +Y  L  A     +   D L    +  + +     +    ++ +  TR+ +    
Sbjct: 119 AAKLERYKALAPAQAISRQDYDDALATDRAAKADIAQAKANIELSAVNLGYTRVTAPITG 178

Query: 178 RLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           R+   L    +L+ +  SS+   +T +  ++    +   D  +  R +   TL+   N  
Sbjct: 179 RIGRVLTTVGALVTSGQSSNMAIVTRLDPIYVDVNLPTVDFLRLRRELKAGTLKRNGNDA 238

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           E   +L   +    +  L  +    +        +  F +    L        +      
Sbjct: 239 EVSLILDDNSTYNQKGRLALSEVSADTQTSTIVVRAVFPNPEHLLLPGMFVYGRIE---- 294

Query: 296 IAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRAK 333
             G           +  +     P++ +V       I A+
Sbjct: 295 -EGVDPNALLVPQESVFRNNHGDPMLYVVNKDD--VIEAR 331



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 46/201 (22%), Gaps = 22/201 (10%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEM 277
           +     +  +L     ++K     +      A  +  +     +        +   A   
Sbjct: 98  QATYDVNKAQLAHAEAQEKTAAAKLERYKALAPAQAISRQDYDDALATDRAAKADIAQAK 157

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL-MKIVPHSKLTYIRAKVTP 336
           + + +         + +PI G I      +        Q   M IV      Y+   +  
Sbjct: 158 ANIELSAVNLGYTRVTAPITGRI-GRVLTTVGALVTSGQSSNMAIVTRLDPIYVDVNLPT 216

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT-- 394
                +++   A             K      ++  I+       Q        +     
Sbjct: 217 VDFLRLRRELKA----------GTLKRNGNDAEVSLILDDNSTYNQKGRLALSEVSADTQ 266

Query: 395 ------DLAFSDNNIELRNGF 409
                    F +    L  G 
Sbjct: 267 TSTIVVRAVFPNPEHLLLPGM 287


>gi|325110446|ref|YP_004271514.1| efflux transporter RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
 gi|324970714|gb|ADY61492.1| efflux transporter, RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
          Length = 444

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/331 (11%), Positives = 111/331 (33%), Gaps = 33/331 (9%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             +R       S +    +  DV+E   E     + +   +     +KV           
Sbjct: 69  AEIRARATGYISGIKV--DIGDVVEAGAELAVIDVPELDKQKQILEAKVVRAESEEKRAQ 126

Query: 164 LKMKLT--RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             ++L    +++         ++ S ++A +++ + +    ++L ++ ++ ++ +  + R
Sbjct: 127 AGVELAMANVQAAEARAAQARSEMSSVQASVAAAEAEFDRTQDLVDRQSL-ESRVLDEVR 185

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               S    R  +    + +R        A  + ++   +++      + +      +L 
Sbjct: 186 KRRDSE---RARLEAVNSAIRSAEAEVSVARAKASSAEADVAAAQAATEVS----RKELE 238

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ------SQPLMKIVPHSKLTYIRAKVT 335
            LE       + +P +G + + ++    +  ++       +PL  I        +R  + 
Sbjct: 239 QLEVLIGYSILKAPFSGIVTH-RAVDPGDLVRETSEVGLGEPLFVIS-QVDKVRVRVPLP 296

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
                 V +G T ++ FP +    E   +A + +    +      +           I +
Sbjct: 297 EIDAAQVNRGDTLSLTFPSF--SGEAAIEATVTRTTGRLDPSTRTM-----------IVE 343

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
               + + +L  G   E     +   +A  +
Sbjct: 344 ADVENADGKLLPGMFGEATIHFRTQAVANML 374


>gi|299771583|ref|YP_003733609.1| membrane-fusion protein [Acinetobacter sp. DR1]
 gi|298701671|gb|ADI92236.1| membrane-fusion protein [Acinetobacter sp. DR1]
          Length = 446

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 79/230 (34%), Gaps = 28/230 (12%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDL 266
             ++Q D   QE  +  S   ++    ++   +  +NE   E   +   Y ++     DL
Sbjct: 87  QLIAQIDSTTQENSLKTSDANIKNLEAQRLQQVASLNEKQLEYRRQQQMYAQDATPRADL 146

Query: 267 EQNQRTFADEMSKLTILEKTRE--------------QKTILSPIAGTIVYNQSFSSSNYA 312
           E  + ++    +++  L+   E                 I++P  GT+V           
Sbjct: 147 ESAEASYKTAQAQIKALDAQIESAKVTKSTAQTNIGYTRIVAPTDGTVVAI-VTEEGQTV 205

Query: 313 QQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +Q    IV  +  +   I+A+V+   I  V+KG             R    + I    
Sbjct: 206 NANQSAPTIVKIAKLQNMTIKAQVSEADIMKVEKGQQVYFTTLGEDTKRYATLRQIEPAP 265

Query: 371 DPIISQQDNNLQTQE----YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           D I S+  +   +      YY  +  +      + + +LR    A+V   
Sbjct: 266 DSISSESTSTTSSTTSSAVYYNALFDVP-----NTDGKLRIDMTAQVYIV 310



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 56/150 (37%), Gaps = 10/150 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     ++ + +  SG +KK  V+ G Q+ QG  +   +     + +   
Sbjct: 46  IENNVLATGTLDA-TKLISVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSTTQENSLKTS 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +IKNL      + ++L+         EK  E R +Q +           +       +
Sbjct: 105 DANIKNLEAQRLQQVASLN---------EKQLEYRRQQQMYAQDATPRADLESAEASYKT 155

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               +K    ++ S  + +   +      R
Sbjct: 156 AQAQIKALDAQIESAKVTKSTAQTNIGYTR 185


>gi|152985683|ref|YP_001350279.1| RND efflux membrane fusion protein precursor [Pseudomonas
           aeruginosa PA7]
 gi|150960841|gb|ABR82866.1| probable RND efflux membrane fusion protein precursor [Pseudomonas
           aeruginosa PA7]
          Length = 375

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 20/205 (9%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + ++ + +   ++ E           +     +   E          + ++    +A   
Sbjct: 91  RLDQPLIQLESDVEEATLRTAEADLGLARAEYQRGRELIGSKAISKSEFDRLAAQWAKTS 150

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTP 336
           + +  L+    +K +L+P AGTI   +     +Y     P+  +         +   +  
Sbjct: 151 ATVAELKAALAKKRLLAPFAGTI-GIRQVDVGDYVSPGTPIATL--QDLSTLLLDFHLPE 207

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           +    + +G    VR   Y     + F A I  I+P +     NLQ              
Sbjct: 208 QDFPLLSRGQAVRVRVAAYP---GQVFDAEIAAINPKVDNATRNLQV-----------RA 253

Query: 397 AFSDNNIELRNGFPA--EVLFTAKN 419
           A  +   +L  G  A  EV+   + 
Sbjct: 254 ALENPGGKLLPGMFANLEVMLPGEE 278


>gi|221069620|ref|ZP_03545725.1| secretion protein HlyD family protein [Comamonas testosteroni KF-1]
 gi|220714643|gb|EED70011.1| secretion protein HlyD family protein [Comamonas testosteroni KF-1]
          Length = 311

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 74/214 (34%), Gaps = 5/214 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +   P      + G+I  E  ++++ S  SG++++  V+ G  + +G  +L   D     
Sbjct: 42  AQTKPQSQVAVARGKIDVEGGLLDLSSAASGVVQQLLVKEGQSLQKGQLVLRLADDAARA 101

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + + +  ++  +  + T +  L  L       + A +     L        +       
Sbjct: 102 DLAVAESELQLAQTKLKTRQDRLPALKATLTRWQAAAKQGAADLQSVDEAVQALRDAQSE 161

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLEN-----KSSLLRALLSSHQKDLTMMKNLFEKN 209
             I++   ++  +        L R +L          LL    S  Q    +   L ++ 
Sbjct: 162 VDIAAAEVTVARRKAEQLRALLQRHELRAPEAAVVVRLLAQGGSMLQSGSPVAVLLPKRP 221

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
            + + ++N+      +  ++ +  +    +  R 
Sbjct: 222 LIVRAEVNESYVTAIREGMKAQVVVDADGSAARQ 255



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 76/240 (31%), Gaps = 14/240 (5%)

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               S V      +  +S          +    LDL + +S +   L   +        L
Sbjct: 31  QDAASVVTPAAAQTKPQSQVAVARGKIDVEGGLLDLSSAASGVVQQLLVKEGQSLQKGQL 90

Query: 206 FEKNA---------VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--E 254
             + A         V++++L   +  +      L               +   +     E
Sbjct: 91  VLRLADDAARADLAVAESELQLAQTKLKTRQDRLPALKATLTRWQAAAKQGAADLQSVDE 150

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
               L++   +++           K   L    ++  + +P A  +V   +    +  Q 
Sbjct: 151 AVQALRDAQSEVDIAAAEVTVARRKAEQLRALLQRHELRAPEAAVVVRLLAQG-GSMLQS 209

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK-AIIEKIDPI 373
             P+  ++P  +   +RA+V    +  +++G  A V          ++F  A + +I P+
Sbjct: 210 GSPVAVLLPK-RPLIVRAEVNESYVTAIREGMKAQVVVDADGSAARQEFPAATVLRISPV 268


>gi|32472082|ref|NP_865076.1| membrane spanning export protein [Rhodopirellula baltica SH 1]
 gi|32397454|emb|CAD72760.1| similar to membrane spanning export protein [Rhodopirellula baltica
           SH 1]
          Length = 709

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 53/144 (36%), Gaps = 11/144 (7%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI---IKKFQ 71
                +    ++ +  L  W   + ++  V ++G           ++ F+GI   + + +
Sbjct: 417 TRHWILAGCMLLAVGLLAGW--FIQVDHHVVATGLARPAVR----QAMFAGIDGVVNELK 470

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V++G  + QG  L+  E+ E T         +      + + ++ L  L    D  + A 
Sbjct: 471 VKDGDVVRQGDVLVQLENPELTREAQALSGQLATATEKLSSVRAML--LAASDDSRDSAQ 528

Query: 132 ESREEQLLDFLGKYHSTCSKVFNY 155
              E+Q L+      +   ++   
Sbjct: 529 SILEQQTLENQIDSLNKRLQINRE 552


>gi|240128715|ref|ZP_04741376.1| putative ABC transporter, periplasmic protein [Neisseria
           gonorrhoeae SK-93-1035]
 gi|268687101|ref|ZP_06153963.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
 gi|268627385|gb|EEZ59785.1| periplasmic protein [Neisseria gonorrhoeae SK-93-1035]
          Length = 392

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++++
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLNME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 83/257 (32%), Gaps = 26/257 (10%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               +++ +Y+       K  L+  + S+ Q +   M+        S+ +  Q + +  +
Sbjct: 64  QASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLNMEK-------SKLETYQAKLVSAQ 116

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             L   E  ++++  L   +    E      + L     ++ + +         +   E 
Sbjct: 117 IALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELKALIRQSKISINTAES 176

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVK 343
                 I + + GT+V             +Q    IV  +   +   + ++    I  VK
Sbjct: 177 DLGYTRITATMDGTVVAIPV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGDITKVK 235

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVILKITD 395
            G    + F   ++      KA ++ +DP ++           +      YY     +  
Sbjct: 236 AGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYARSFVP- 291

Query: 396 LAFSDNNIELRNGFPAE 412
               + + +L  G   +
Sbjct: 292 ----NPDGKLATGMTTQ 304


>gi|228470046|ref|ZP_04054957.1| efflux transporter, RND family, MFP subunit [Porphyromonas uenonis
           60-3]
 gi|228308320|gb|EEK17169.1| efflux transporter, RND family, MFP subunit [Porphyromonas uenonis
           60-3]
          Length = 353

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 57/204 (27%), Gaps = 16/204 (7%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              + D   + +++ +   E      E   +     +   E   +  +      + L   
Sbjct: 85  YADEGDHVSKGKLLIQLDAETLRADAEASRVAYEAAKKDYERFQQAHSQGGVTDQQLSTM 144

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
                    +           +I +PI+G I   +     +Y      L  IV       
Sbjct: 145 HTQMVAAQGRYISSRSRLTDASIKAPISGEIYK-RYVEVGSYVNPGTKLFDIV-DDSQLK 202

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
               VT +Q   + KG   +V    Y          I  KI  +  + ++ L     + V
Sbjct: 203 ASCFVTERQRLQLTKGQAVSVESELYPGQT------ITGKISMVGDKANHALA----FPV 252

Query: 390 ILKITDLAFSDNNIELRNGFPAEV 413
            + +           LR G    V
Sbjct: 253 DVTLDKQGAEG----LRPGMYVSV 272



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 48/115 (41%), Gaps = 5/115 (4%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +++G +    ++  + S   G +     + G  + +G  L+  +        +  +V+ +
Sbjct: 60  TANGLVEGVKDLSFVSSL-GGRVVSLYADEGDHVSKGKLLIQLDAETLRADAEASRVAYE 118

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +   +  + A     ++  V ++   +   Q++   G+Y S+ S++ +  I +
Sbjct: 119 AAKKDYERFQQAH----SQGGVTDQQLSTMHTQMVAAQGRYISSRSRLTDASIKA 169


>gi|254461894|ref|ZP_05075310.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083]
 gi|206678483|gb|EDZ42970.1| conserved hypothetical protein [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 385

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 74/268 (27%), Gaps = 79/268 (29%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             I      II    V  G  + +G  L  ++  E    + L        R  +   +S 
Sbjct: 52  QVIAPLDGRIIS--HVSEGQHVTKGDLLGEYDTAELDRALRLA-------RSRLSISQSR 102

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           +D ++                          +  K+   G++S+ RSL            
Sbjct: 103 VDQIDGP---------------------LTESRRKLQKMGLASMQRSLH----------- 130

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
                            + +K+   + +L E+  +++                      E
Sbjct: 131 -----------------TARKEHEQLLDLAEQGRLAKRR------------------ATE 155

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
               L+   E    A L+   +  E +  + + +    D    L  LE+      + +P+
Sbjct: 156 SAERLKQDEEDLTRAELQLVIFDIETNLQISEMRSGLLDHSIALEELEEKAASTFVTAPV 215

Query: 297 AGTIVYNQS---FSSSNYAQQSQPLMKI 321
            G +   +     +          L+ I
Sbjct: 216 DGRVNIVERRIDRTGEATVSAGTHLLSI 243


>gi|149178782|ref|ZP_01857364.1| Secretion protein HlyD [Planctomyces maris DSM 8797]
 gi|148842399|gb|EDL56780.1| Secretion protein HlyD [Planctomyces maris DSM 8797]
          Length = 418

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 87/261 (33%), Gaps = 25/261 (9%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQE 220
            ++ +     ++    R  +      ++    + +    +++ LFE    V + +L   +
Sbjct: 61  ATVTVAQAEQQTWQRERTGI-GTVRAIQGTDLTSELAGKVIEILFESGKRVRRGELL-VQ 118

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                   EL     E K    ++  +      E          + EQ         S  
Sbjct: 119 LDASSEKAELESIEAELKQAHSNLGRVK-----ELLQKDATTEENYEQMMTEVERLKSSA 173

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                  E+K IL+P +G I   +  S   Y    +  +  +      Y+   +  +   
Sbjct: 174 DRQRAIIEKKEILAPFSGEI-GIRQISLGQYLSP-ETAVATLQQLDPIYVDFDLPEQDAG 231

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            +K+G +  +    +       F+  +  ++P+I +   +      ++V  ++ +     
Sbjct: 232 LIKEGQSVRISVSAHPKH---VFRGSVIAVNPLIEESTRS------FKVRAQLGNEER-- 280

Query: 401 NNIELRNGFPAEVLFT-AKNT 420
              +LR G  A+V+   + + 
Sbjct: 281 ---KLRPGMFAQVVVEISGDR 298



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 36/119 (30%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +   E+G ++ +G  L+  +       ++  +  +K    ++   K  L       
Sbjct: 97  GKVIEILFESGKRVRRGELLVQLDASSEKAELESIEAELKQAHSNLGRVKELLQKDATTE 156

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +  E+     E        +      K      S      ++ L +  S       L+ 
Sbjct: 157 ENYEQMMTEVERLKSSADRQRAIIEKKEILAPFSGEIGIRQISLGQYLSPETAVATLQQ 215


>gi|56790034|dbj|BAD82813.1| myosin heavy chain [Cyprinus carpio]
          Length = 1931

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 81/214 (37%), Gaps = 12/214 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ----LLDFLG 143
            +  E+ + +  K  S++  +  +  E   L     + + L    + ++      L ++  
Sbjct: 1397 DAEESIEAVSSKCASLEKTKQRLQGEVEDLMIDGERANALAANLDKKQRNFDKVLAEWKQ 1456

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY  + +++      +  RSL  +L +M++ Y   LD       L+    + Q++++ + 
Sbjct: 1457 KYEESHAELEAAQKEA--RSLSTELFKMKNSYEEALD---HLETLKRENKNLQQEISDLS 1511

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                +   S ++L + ++IV     E++  + E ++ L H         LE      EI 
Sbjct: 1512 EQLGETGKSIHELEKAKKIVESEKAEIQTALEEAESTLEHEESKILRVQLELNQVKSEID 1571

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQK---TILS 294
            R L +              +  + +      I S
Sbjct: 1572 RKLAEKDEEIEQIKRNSQRVMDSMQSTLDSEIRS 1605



 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 30/241 (12%), Positives = 83/241 (34%), Gaps = 22/241 (9%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREE--QL 138
            L  +  +T   +  +  +++ ++  ++ EKS     +D L +  + + KA  + E+  + 
Sbjct: 1190 LRKKQADTVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLTSNMEAVAKAKGNLEKMCRT 1249

Query: 139  LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            L+         S   +  ++ +        T          + E   S L     +  + 
Sbjct: 1250 LEDQLSEIKAKSDENSRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQ 1309

Query: 199  LTMMKNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +K   E+   ++N L               +Q     ++  EL+  + +  + +   
Sbjct: 1310 IEDLKRHVEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKTELQRGMSKANSEVAQW 1369

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               Y+   ++    L+E  + L Q  +   + +  ++    + E+      + G +    
Sbjct: 1370 RAKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVSSKCASLEKTKQR--LQGEVEDLM 1427

Query: 305  S 305
             
Sbjct: 1428 I 1428



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 67/226 (29%), Gaps = 20/226 (8%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  +       ++      +     ++ EK   D    K D     F S+ E       +
Sbjct: 1042 LRMDLERVKRKLEGDLKLAQESIMDLENEKQQSDEKIKKKDFEISQFLSKIEDEQSLGAQ 1101

Query: 145  YHSTCSKVFNYGISSVYRSL----------KMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
                  ++                      K +    R +      LE       A +  
Sbjct: 1102 LQKKIKELQARIEELEEEIEAERAARAKVEKQRADLSRELEEISERLEEAGGATAAQIEM 1161

Query: 195  HQKD----LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            ++K       M ++L E     +       +    +  EL E I   + + + + +   E
Sbjct: 1162 NKKREADFQKMRRDLEESTLQHEATAAALRKKQADTVAELGEQIDNLQRVKQKLEKEKSE 1221

Query: 251  ANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +E  +       + +   +LE+  RT  D++S++        ++
Sbjct: 1222 YKMEIDDLTSNMEAVAKAKGNLEKMCRTLEDQLSEIKAKSDENSRQ 1267



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 76/255 (29%), Gaps = 38/255 (14%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID--------TEKSALDF------LN 121
             + ++G   +  +         L +  I+ LR  ++         E+  +D       L+
Sbjct: 1656 DEAVRGQENMKEQVAMVERRNTLMQAEIEELRAALEQTERGRKVAEQELVDASERVGLLH 1715

Query: 122  NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL--TRMRSIYLNRL 179
            ++   L    +  E  LL   G+      +  N    +        +    ++       
Sbjct: 1716 SQNTSLINTKKKLETDLLQVQGEVDDAVQEARNAEEKAKKAITDAAMMAEELKKEQDTSA 1775

Query: 180  DLENKSSLLRALLSSHQKDLTMMKNLFEKN-------AVSQNDLNQQE------------ 220
             LE     +   +   Q  L   ++L  K          S+    + E            
Sbjct: 1776 HLERMKKNMEVTVKDLQHRLDEAESLAMKGGKKQLQKLESRVHELEAEVEAEQRRGADAV 1835

Query: 221  ---RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               R   +   EL     E K  +  + +L D+  L+   Y ++     EQ     +   
Sbjct: 1836 KGVRKYERRVKELTYQTEEDKKNVTRLQDLVDKLQLKVKAYKRQAEEAEEQANTHLSRYR 1895

Query: 278  SKLTILEKTREQKTI 292
                 LE++ E+  I
Sbjct: 1896 KVQHELEESHERADI 1910


>gi|332766789|gb|EGJ96990.1| putative secretion protein [Shigella flexneri 2930-71]
          Length = 205

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 62/172 (36%), Gaps = 5/172 (2%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            N+  + S  SG I   +V +   + +G  +L  +D +    +   +  IK+ + +++  
Sbjct: 34  GNITTVASKVSGYISAIEVRDNQSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLEGI 93

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL--KMKLTRM 171
           ++ +     +  +++ A E+ +    +   +   T         +++ + +    +    
Sbjct: 94  QATITM---QQSIIQSASETWQAVKHEEQKRLRDTERYEKLAQSAAISQQIIDNARFDYQ 150

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +     R    +     + L     ++  +  ++ E  A     L   E  +
Sbjct: 151 QVAAKERKAANDFLVEKQRLAVLSAQEENVRASIEEVQAALTQALLDLEYTL 202


>gi|261213063|ref|ZP_05927347.1| multidrug resistance efflux pump [Vibrio sp. RC341]
 gi|260838128|gb|EEX64805.1| multidrug resistance efflux pump [Vibrio sp. RC341]
          Length = 376

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 75/233 (32%), Gaps = 25/233 (10%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   ++ +   +K        +  N  + +       A     Q++    +  +E+ A +
Sbjct: 99  FEAEVTRLRAKVKEANQGALGLESNLKEAQAAVQKAIAERDKAQREFDRYQRGYERGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  ++   +    +   L   + + K     I                 ++ ++     T
Sbjct: 159 EQQMDTTRQAYKAAQAALE--VAQSKQEQAQIA----------------LNSEVGGENTT 200

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS--NYAQQSQPLMKIVPHSKLTYI 330
            A  +++L   E   +Q  + +P  G +           +      P+M  V   +  Y 
Sbjct: 201 VAQLLAELRKAEFDLDQTVVRAPTDGYVTQLALR-PGMMSVPLPLAPVMTFVHTEEKIYT 259

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            A      +Q ++ G++A   F        K FK  + ++ P I +     + 
Sbjct: 260 AA-FRQNSLQRLQTGFSAEFMFRALP---GKVFKGEVIEVLPAIGESQIQARG 308



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 47/147 (31%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G +    V     + QG  L   + I     +   +  +K        L  ++   ++A+
Sbjct: 72  GRVIDVPVTPNRPLKQGEVLFRIDPIPFEAEVTRLRAKVKEANQGALGLESNLKEAQAAV 131

Query: 118 DFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                + D  ++ F+  +   +   F  +   T  + +    +++  +   +     ++ 
Sbjct: 132 QKAIAERDKAQREFDRYQRGYERGAFTEQQMDTTRQAYKAAQAALEVAQSKQEQAQIALN 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                     + L A L   + DL   
Sbjct: 192 SEVGGENTTVAQLLAELRKAEFDLDQT 218


>gi|150378134|ref|YP_001314729.1| RND family efflux transporter MFP subunit [Sinorhizobium medicae
           WSM419]
 gi|150032681|gb|ABR64796.1| efflux transporter, RND family, MFP subunit [Sinorhizobium medicae
           WSM419]
          Length = 367

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 58/178 (32%), Gaps = 13/178 (7%)

Query: 206 FEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           FE+ A+ S     + E    ++  +L E + E+   L       +   L     + ++  
Sbjct: 100 FERGALESAVTGRKAEADALRAQTDLAEAVLERNTRLSERRAASEATRLAALADVLDLRA 159

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L   Q   +D        E++     + +   G ++  +S         +  LM IV  
Sbjct: 160 QLRSKQAEVSD-------AERSLSHAEVRAEF-GGVIAARSVEEGQTVPLNTQLMTIVEL 211

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           +    + A V   +I  ++      +    +       F   + +I P        ++
Sbjct: 212 N-RLEVDAGVPTSRIPLIRLKQPVELTVEGFPGRT---FSGEVARISPTAEAGSRAVR 265



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 47/154 (30%), Gaps = 1/154 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V   G +        + S  S  I +  V+ G  +  G  L+ FE       +  +K   
Sbjct: 58  VRIVGSLTPI-RRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRFERGALESAVTGRKAEA 116

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             LR   D  ++ L+      +    +  +R   L D L       SK      +    S
Sbjct: 117 DALRAQTDLAEAVLERNTRLSERRAASEATRLAALADVLDLRAQLRSKQAEVSDAERSLS 176

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                     +   R   E ++  L   L +  +
Sbjct: 177 HAEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVE 210


>gi|281344810|gb|EFB20394.1| hypothetical protein PANDA_012664 [Ailuropoda melanoleuca]
          Length = 957

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 73/203 (35%), Gaps = 12/203 (5%)

Query: 91  ETTDLIDLKKVSIKNLRC-HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +  D  +  +  +  L+    DTEK+       + +   +A E R  +L +   +     
Sbjct: 363 QAADDSEFLRAELDELKKKREDTEKAQRSL--TEIERRAQANEQRYSKLKEKYSELVQNH 420

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH-QKDLTMMKNLFEK 208
           + +     + V + + +       +   + +LE+    +        Q+ + ++++L ++
Sbjct: 421 ADLLRKN-AEVTKQVSVARQAQADLEREKKELEDSFQRISDQAQRKTQEQMEVLESLKQE 479

Query: 209 NAVSQNDLNQQERIV---YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            A S+ +L   +  +    +S  +    I E +    ++         E    L  +   
Sbjct: 480 LATSKQELQIVQGSLETSAQSEAKWAAQIAELEKERSNLAHAVARGEEE----LSALQEQ 535

Query: 266 LEQNQRTFADEMSKLTILEKTRE 288
           LE  QR  +   +   + +  R 
Sbjct: 536 LEHTQRELSSAKATCQLAKDQRR 558


>gi|291614323|ref|YP_003524480.1| efflux transporter, RND family, MFP subunit [Sideroxydans
           lithotrophicus ES-1]
 gi|291584435|gb|ADE12093.1| efflux transporter, RND family, MFP subunit [Sideroxydans
           lithotrophicus ES-1]
          Length = 524

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 17/144 (11%)

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
           E  K + +     + T  +P+ G ++  ++          + L +I       ++ A++ 
Sbjct: 222 EREKQSSIPDN-SRVTFRAPVTGIVLEKKAV-QGMRFMPGETLYQIA-DLSSLWVIAEIN 278

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            + I  V  G    V    + +     F   ++ I P ++     +Q      V +++  
Sbjct: 279 EQDIGQVHIGNRVQVTVDAWPER---MFDGKVDFIYPTLNSATRTVQ------VRIELD- 328

Query: 396 LAFSDNNIELRNGFPAEVLFTAKN 419
              +   + L+    A V      
Sbjct: 329 ---NPKGV-LKPAMFANVRIAVGQ 348



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 49/156 (31%), Gaps = 12/156 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVV-EIKSPFSGIIKKFQV-ENGSQILQGTPLL------- 85
           + L  ++ ++  +G I  ++     I   F G +++  V   G  + +G PL        
Sbjct: 100 AALRELDRTLRVTGRIEVDERRTYAISPKFEGWVERLYVNTTGQTVSKGQPLFDVYSPEL 159

Query: 86  ---TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
                E       +   K +    +  +     A     N +D+ +    S +       
Sbjct: 160 VSARGEYALALQGLAALKDADAETKAGMQQLADASRSRLNNWDIADVPLPSPQSSPASGR 219

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           G      S + +    +    +   +   +++   R
Sbjct: 220 GGEREKQSSIPDNSRVTFRAPVTGIVLEKKAVQGMR 255


>gi|197287408|ref|YP_002153280.1| cell division protein [Proteus mirabilis HI4320]
 gi|194684895|emb|CAR47054.1| cell division protein [Proteus mirabilis HI4320]
          Length = 612

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/206 (10%), Positives = 60/206 (29%), Gaps = 5/206 (2%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +   + E      L+    +      + E+ A +    +   L +    R+ QL     +
Sbjct: 57  VRLAEEEAQRQAQLEAEQARQEAQRAEAERLAAE--RAEQARLAEEEAQRQAQLEAEQAR 114

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +  ++     +++                  +   + +    RA       +      
Sbjct: 115 QEAQRAEA--ERLAAERAEQARLAEEEAQRQAQQEAEQARQEAQRAEAERLAAERAEQAR 172

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E+ A  Q  L  ++        E  E +  ++     + E   +   +          
Sbjct: 173 LAEEEAQRQAQLEAEQARQEAQRAE-AEKLAAERAEQARLAEEEAQRQAQLEAEQARQEA 231

Query: 265 DLEQNQRTFADEMSKLTILEKTREQK 290
              + +R  A+   +  + E+  +++
Sbjct: 232 QRAEAERLAAERAEQTRLAEEEAQRQ 257



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/193 (7%), Positives = 61/193 (31%), Gaps = 10/193 (5%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  ++ E++    L  +    +   E+ + +L +   +  +          +    + ++
Sbjct: 28  QQRLEAERAEQARLAEEEAQRQAQLEAEQVRLAEEEAQRQAQLEAEQARQEAQRAEAERL 87

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA---------VSQNDLN 217
              R     L   + + + + L A  +  +      + L  + A           +    
Sbjct: 88  AAERAEQARLAEEEAQRQ-AQLEAEQARQEAQRAEAERLAAERAEQARLAEEEAQRQAQQ 146

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E+   ++     E +  ++     + E   +   +             + ++  A+  
Sbjct: 147 EAEQARQEAQRAEAERLAAERAEQARLAEEEAQRQAQLEAEQARQEAQRAEAEKLAAERA 206

Query: 278 SKLTILEKTREQK 290
            +  + E+  +++
Sbjct: 207 EQARLAEEEAQRQ 219



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/228 (10%), Positives = 60/228 (26%), Gaps = 28/228 (12%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           L  E +   +    ++  ++  +   + +++  + L  +     +  E   ++      +
Sbjct: 52  LEAEQVRLAEEEAQRQAQLEAEQARQEAQRAEAERLAAERAEQARLAEEEAQRQAQLEAE 111

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTR-------------------------MRSIYLNRL 179
                ++       +  R+ + +L                           + +    + 
Sbjct: 112 QARQEAQRAEAERLAAERAEQARLAEEEAQRQAQQEAEQARQEAQRAEAERLAAERAEQA 171

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            L  + +  +A L + Q      +   EK A  + +  +      +   +L     EQ  
Sbjct: 172 RLAEEEAQRQAQLEAEQARQEAQRAEAEKLAAERAEQARLAEEEAQRQAQLE---AEQAR 228

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                 E    A                Q Q        +    EK R
Sbjct: 229 QEAQRAEAERLAAERAEQTRLAEEEAQRQAQLEAEQARQEAEAEEKAR 276


>gi|150005683|ref|YP_001300427.1| hypothetical protein BVU_3173 [Bacteroides vulgatus ATCC 8482]
 gi|149934107|gb|ABR40805.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|313677888|gb|ADR74149.1| hypothetical protein [uncultured bacterium 52B7]
          Length = 416

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 107/314 (34%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTCSK 151
           TD I + +V       ++D E      L  K +  E     R   +  + + +  +    
Sbjct: 45  TDNIQIAEVKDDKFMEYVDVEGLVQPILTIKVNTREAGSVDRIVGEEGNMMKQGDTLLIL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                I S+         +  +     +++E KS  L+      Q ++  ++        
Sbjct: 105 TNPDLIRSIEDQRDEWEKQRITYKEKEIEMEQKSLTLKQQTLQAQYEMERLR-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        +    + E +   +  N      +L+  + +  I ++L +N  
Sbjct: 157 -KSFGLDKEEFKMGIKSKAELQVSEDEYKYKLKNTALQMESLKHDSSVTLIRKELLKN-- 213

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  KL   E+  E   I +PI G + + +  +        + + +I        I 
Sbjct: 214 DLERESKKLKRAEERLEDLIIKAPIGGQLSFVKV-TPGQQVASGESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPI-ISQQDNNLQTQE 385
             ++   I  +  G  ATV +    Y     K    + ++   +D +   +   N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATVNYQGKRYPLRITKVVPEVKDRMFDVDLVFTGEMPENVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEQA 345


>gi|118400729|ref|XP_001032686.1| Kinesin motor domain containing protein [Tetrahymena thermophila]
 gi|89287030|gb|EAR85023.1| Kinesin motor domain containing protein [Tetrahymena thermophila
           SB210]
          Length = 1284

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 7/206 (3%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN----NKYDVLEKAFESREEQLL 139
           LL   D E  +LID  K+ ++  +      K  +D +      +    E+   S   Q+ 
Sbjct: 789 LLEKNDEELRELIDRLKIKLQRRKEECLMLKDNIDKVERDIYQQRVFYEEEKNSMVRQIK 848

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKD 198
           D    Y     KV N  I  +  +L  ++     +    + DLE  +     +   +Q++
Sbjct: 849 DLTNAYEDE--KVRNQDIQRINENLDYQIDNQERLLKKLQEDLELSNKRYDNIQIMYQEE 906

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            ++ K L    AV +  +++ E       ++L +     +     I E  D+  ++    
Sbjct: 907 QSLSKELKLAQAVYEKRIDEAEDRAQTLEVKLNKLKRRFQEERNQIVEEKDQELIKKKEA 966

Query: 259 LKEISRDLEQNQRTFADEMSKLTILE 284
              +  +++  +R   +    L IL+
Sbjct: 967 TARLKNEIKDLERRVQELTQDLKILK 992


>gi|218515518|ref|ZP_03512358.1| probable protein secretion protein, HlyD family [Rhizobium etli
           8C-3]
          Length = 205

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 14/189 (7%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +   + +     EA    A       + +E+N        S +   ++  +   + +P  
Sbjct: 1   EAARQKVTVAKAEAATTLAQLGGSADQPIEENPLYLQA-KSNVDNAQRELDHSVVKAPFD 59

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G +    +    +Y Q SQ    +V  +   +I A     ++ +VK G TA +    Y  
Sbjct: 60  GIVTNVNALQVGSYLQASQQAFSLV-ATGHLWIAASPKETELTYVKSGQTAEIYVDTYPG 118

Query: 358 IREKKFKAIIEKIDPII--------SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +    +K  +E I P          +Q       +    + ++++          LR G 
Sbjct: 119 VT---WKGKVESISPASGSSFALLPAQNTTGNWVKVVQRIPMRVSIEDVQGKP-PLRVGM 174

Query: 410 PAEVLFTAK 418
              V     
Sbjct: 175 STVVDVDTG 183


>gi|189423608|ref|YP_001950785.1| efflux transporter RND family, MFP subunit [Geobacter lovleyi SZ]
 gi|189419867|gb|ACD94265.1| efflux transporter, RND family, MFP subunit [Geobacter lovleyi SZ]
          Length = 400

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 69/196 (35%), Gaps = 19/196 (9%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            K+ L L ++  ++  +L        +  L      K    +L  ++   A     L  L
Sbjct: 139 SKTKLALAQSSMDRIKLLVDKKIAARKDILLAETEFKTAQTELHTDEERLALYGVSLADL 198

Query: 284 EKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
             TR +     + SPI+G I    +      A  S+ L  I       +I   +  K + 
Sbjct: 199 TNTRHRSPLLPVRSPISGIITEKHAI-VGELADPSKNLFTIA-DLSSVWIMVDINEKDLA 256

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            + +G  A+V    + D++    +  I  I  ++ Q    +      +  +++ +L    
Sbjct: 257 KIHRGQIASVSVSAFPDLK---LQGRITYIADLVDQNTRTV------KARIEVANLQR-- 305

Query: 401 NNIELRNGFPAEVLFT 416
              +L+    A V   
Sbjct: 306 ---KLKPEMFASVELK 318



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 92/243 (37%), Gaps = 13/243 (5%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +    +   +S++G++    + +   SP  SG I   +   G Q+  G  L+T + +E  
Sbjct: 71  AATQRLAGVISATGKVDVNSDRIAHVSPRISGKIVSVRSSLGDQVSAGQVLVTLDSVELG 130

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           + ++ +    K       +    +  L +K     K     E +      + H+   ++ 
Sbjct: 131 EALN-RYHQSKTKLALAQSSMDRIKLLVDKKIAARKDILLAETEFKTAQTELHTDEERLA 189

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA--- 210
            YG+S    +     + +  +      +  +   +   L+   K+L  + +L        
Sbjct: 190 LYGVSLADLTNTRHRSPLLPVRSPISGIITEKHAIVGELADPSKNLFTIADLSSVWIMVD 249

Query: 211 VSQNDLNQQERIVYKS-------TLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           +++ DL +  R    S        L+L+  I    +++   N    +A +E AN  +++ 
Sbjct: 250 INEKDLAKIHRGQIASVSVSAFPDLKLQGRITYIADLVDQ-NTRTVKARIEVANLQRKLK 308

Query: 264 RDL 266
            ++
Sbjct: 309 PEM 311


>gi|30062861|ref|NP_837032.1| putative secretion protein [Shigella flexneri 2a str. 2457T]
 gi|110805767|ref|YP_689287.1| putative secretion protein [Shigella flexneri 5 str. 8401]
 gi|30041109|gb|AAP16839.1| putative secretion protein [Shigella flexneri 2a str. 2457T]
 gi|110615315|gb|ABF03982.1| putative secretion protein [Shigella flexneri 5 str. 8401]
 gi|281601238|gb|ADA74222.1| putative secretion protein [Shigella flexneri 2002017]
 gi|313650572|gb|EFS14975.1| multidrug resistance A domain protein [Shigella flexneri 2a str.
           2457T]
 gi|332757578|gb|EGJ87912.1| multidrug resistance protein A domain protein [Shigella flexneri
           4343-70]
 gi|332760184|gb|EGJ90480.1| multidrug resistance protein A domain protein [Shigella flexneri
           K-671]
 gi|333004814|gb|EGK24336.1| multidrug resistance protein A domain protein [Shigella flexneri
           K-218]
 gi|333018595|gb|EGK37889.1| multidrug resistance protein A domain protein [Shigella flexneri
           K-304]
          Length = 215

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 62/172 (36%), Gaps = 5/172 (2%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            N+  + S  SG I   +V +   + +G  +L  +D +    +   +  IK+ + +++  
Sbjct: 44  GNITTVASKVSGYISAIEVRDNQSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLEGI 103

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL--KMKLTRM 171
           ++ +     +  +++ A E+ +    +   +   T         +++ + +    +    
Sbjct: 104 QATITM---QQSIIQSASETWQAVKHEEQKRLRDTERYEKLAQSAAISQQIIDNARFDYQ 160

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +     R    +     + L     ++  +  ++ E  A     L   E  +
Sbjct: 161 QVAAKERKAANDFLVEKQRLAVLSAQEENVRASIEEVQAALTQALLDLEYTL 212


>gi|91976990|ref|YP_569649.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5]
 gi|91683446|gb|ABE39748.1| secretion protein HlyD [Rhodopseudomonas palustris BisB5]
          Length = 379

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 84/282 (29%), Gaps = 38/282 (13%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + F + I  +  +L      +  +  +            A  +  + DL   ++LF K 
Sbjct: 99  PQPFQFEIDRLQAALAAAQQNVPQLKSSFDQASAGVEKATAQYNLAKADLQRQQDLFSKQ 158

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V+Q  L++ +R           N    + ++   +   + A L + +       ++  +
Sbjct: 159 VVAQAALDRAQR-----------NAETAEQVVAEASAAENRARLAYQS-------NIGSD 200

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL-- 327
               A    +L       ++  + +P  G  V  Q          +  ++  V       
Sbjct: 201 NTAVAQARQQLAAATYNLDESIVRAPCDGYAVNLQLV-PGAIVSAAASVLPFVCDRDQAN 259

Query: 328 --TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ--- 382
               + + +    +  ++ G  A V FP Y          ++  ID     Q        
Sbjct: 260 LGMVVASFMQGPYL-QIRPGEYAEVIFPMYPGRVIPG--KVVSTIDIASEGQLTATGLFP 316

Query: 383 -----TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                    + V +++ D         L  G   +    + +
Sbjct: 317 GIGSPGNTRFAVRIRLDDAE----GRRLPAGMQGDAAIYSGS 354



 Score = 40.0 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 60/195 (30%), Gaps = 30/195 (15%)

Query: 21  TLLSIIGIIGLITWSILL---------PIEISVSSSGE-----ILNEDN----------- 55
            +++I G+  L+ W I           PI + +++ G      IL   N           
Sbjct: 1   MMMAIFGVYMLLIWLIFAKLKLIRLSLPIALVLAAVGPAFAFFILLSMNNYHPSSSDARV 60

Query: 56  ----VVEIKSPFS-GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
               V  +    + G + +   +  + + +G  +   +       ID  + ++   + ++
Sbjct: 61  FQRIVQIVPHITTPGRVAEIVAQPNAPLKKGDVIFRIDPQPFQFEIDRLQAALAAAQQNV 120

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              KS+ D  +   +     +   +  L      +            +        ++  
Sbjct: 121 PQLKSSFDQASAGVEKATAQYNLAKADLQRQQDLFSKQVVAQAALDRAQRNAETAEQVVA 180

Query: 171 MRSIYLNRLDLENKS 185
             S   NR  L  +S
Sbjct: 181 EASAAENRARLAYQS 195


>gi|189218142|ref|YP_001938784.1| membrane-fusion protein, contains peptidase family M50 domain
           [Methylacidiphilum infernorum V4]
 gi|189185000|gb|ACD82185.1| Membrane-fusion protein, contains peptidase family M50 domain
           [Methylacidiphilum infernorum V4]
          Length = 754

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 37/91 (40%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
             + SP  G++++  V NG  +  G PLL  ++ E       +++ + +L   +  +  +
Sbjct: 497 QSLSSPSGGVVEEVYVRNGQWVKAGEPLLKLKNPEIETEERWERLELASLMLDLSPQHGS 556

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +    +   +     +R    L ++ K   
Sbjct: 557 REVKEKEKGAIASLSLNRTISRLRWVEKLKE 587


>gi|37522023|ref|NP_925400.1| cation efflux system membrane protein [Gloeobacter violaceus PCC
           7421]
 gi|35213022|dbj|BAC90395.1| gll2454 [Gloeobacter violaceus PCC 7421]
          Length = 351

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 71/217 (32%), Gaps = 19/217 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD-EANLEFANYLKEISRDLEQ 268
             SQ  L   +R   + T      I  Q+       +L   ++    A    E ++    
Sbjct: 84  LASQARLIAAKRQSDRETYLAGRGISSQREQQEAQAQLASAQSEFAGAQSAIEAAKARLL 143

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
                 +E+++L        + +  S + G ++  +        Q  + L  I   S++ 
Sbjct: 144 AFGLTEEEINRLQRGNDITPRLSARSSVNGQVI-LRKARVGQVVQPGEALFTISDLSEVW 202

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +  KV   ++  +  G +  VRF         + +  + +I   +  Q           
Sbjct: 203 VV-LKVFQSELGRLHVGDS--VRFTVRGLGNT-EVQGRVVRIGEALDPQTRAAD------ 252

Query: 389 VILKITDLAFSDNNIELRNGF--PAEVLFTAKNTTLA 423
           V + I      + + +L+ G    AEV     +  + 
Sbjct: 253 VRVVIP-----NRDRKLKPGMLVQAEVDLGGSSREVL 284



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/178 (10%), Positives = 52/178 (29%), Gaps = 22/178 (12%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE---TTD 94
             +E + + SG +           P    +++  V+ G  + +G  L      E      
Sbjct: 24  ASVEEAATRSGTVSM---------PVGSRVQQINVDIGDSVRKGQVLAVLTSSELGGAKA 74

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNN----------KYDVLEKAFESREEQLLDFLGK 144
            +   K S+   +  +   K   D              +    +    S + +       
Sbjct: 75  DLLSAKASLLASQARLIAAKRQSDRETYLAGRGISSQREQQEAQAQLASAQSEFAGAQSA 134

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +  +++  +G++    +   +   +      R  +  +  L +A +    +    +
Sbjct: 135 IEAAKARLLAFGLTEEEINRLQRGNDITPRLSARSSVNGQVILRKARVGQVVQPGEAL 192


>gi|320104854|ref|YP_004180445.1| RND family efflux transporter MFP subunit [Isosphaera pallida ATCC
           43644]
 gi|319752136|gb|ADV63896.1| efflux transporter, RND family, MFP subunit [Isosphaera pallida
           ATCC 43644]
          Length = 572

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 89/251 (35%), Gaps = 11/251 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
              +  +S+ G I        + +   G I++  V  G ++ +G  L   E  E   L+ 
Sbjct: 214 AEAQKILSAKGYIKARRQT-MVGAMSPGRIERILVSEGMKVGEGELLAVLEHNELDALLK 272

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            ++  I+  +  ++  ++AL+    K + L      R   + +F    + T  ++    +
Sbjct: 273 SREAMIEQKKAELEEAQTALEDRRRKEERLRTLSSRRSVPIEEFEDAVYQT--RMAASRV 330

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN---LFEKNAVSQN 214
            ++  ++++     +       ++E ++     +L+   +    +            S  
Sbjct: 331 EALKAAIRLMEASAQETRETIRNMEIRAPFTGTILTKDAEVGETLTPGGMGAASGRGSVV 390

Query: 215 DL-----NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +L      + E  V +S L   +     +  +  +     +  L     L + +R   + 
Sbjct: 391 NLADLTDLEVETDVAESLLARLQPGQPAEVSVAAVPNRRYQGRLRQIIQLGDRARGTIKV 450

Query: 270 QRTFADEMSKL 280
           +    DE  +L
Sbjct: 451 KVELLDEDERL 461



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 68/256 (26%), Gaps = 39/256 (15%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           L  L    S   + ++  +     ++ +     ++     L  +      R  +      
Sbjct: 180 LAILAALASQAYRYYDARLPKFEVTVAVAQKMTQAEAQKILSAKGYIKARRQTMVGAMSP 239

Query: 199 LTMMKNLFEKNA-VSQNDLNQ-QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             + + L  +   V + +L    E     + L+ RE + EQK       +   E      
Sbjct: 240 GRIERILVSEGMKVGEGELLAVLEHNELDALLKSREAMIEQKKAELEEAQTALEDRRRKE 299

Query: 257 NYLKEIS-------RDLEQNQRTFADEMSKLTIL--------------EKTREQKTILSP 295
             L+ +S        + E          S++  L               +T     I +P
Sbjct: 300 ERLRTLSSRRSVPIEEFEDAVYQTRMAASRVEALKAAIRLMEASAQETRETIRNMEIRAP 359

Query: 296 IAGTIVYNQSFSSSNYAQQSQ-----------PLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
             GTI+  +                        L  +        +   V    +  ++ 
Sbjct: 360 FTGTILT-KDAEVGETLTPGGMGAASGRGSVVNLADL----TDLEVETDVAESLLARLQP 414

Query: 345 GYTATVRFPHYADIRE 360
           G  A V      + R 
Sbjct: 415 GQPAEVSVAAVPNRRY 430


>gi|153010248|ref|YP_001371462.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
 gi|151562136|gb|ABS15633.1| secretion protein HlyD family protein [Ochrobactrum anthropi ATCC
           49188]
          Length = 314

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 78/235 (33%), Gaps = 23/235 (9%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE      +A     Q+ L   ++L ++  ++Q  L+     V  +   + +        
Sbjct: 100 LEAAVRTAKAQADDAQRTLLRTQDLTKRGVMTQAQLDDAATKVEVAEASINQATANL--A 157

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           +  +    +E                   +       ++L        ++TI +P  G I
Sbjct: 158 VGRLPARPEEIKA---------------AENAVKSAEAQLDSARWHLTKRTIEAPAPGRI 202

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 +  + A  S P++ ++P      ++  +   +   V+ G T +VR     D   
Sbjct: 203 TDV-IRNPGDIAGPSAPVLTMLP-DGAVKLKVYIPEDKFSAVRVGDTLSVR----CDGCA 256

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              +A +  + P        + + E  + ++ + +    D    L+ G   +V  
Sbjct: 257 PGLQARVSYVSPDPEFTPPVIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 311


>gi|144898032|emb|CAM74896.1| Membrane-fusion protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 534

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 61/212 (28%), Gaps = 27/212 (12%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V +  L+  ER        L     +     R +        +     L+     L+Q 
Sbjct: 282 VVLEPTLSSLER--SGQRGALYRVESDIALQERELARQESLGGVVTVKALETTRIRLDQL 339

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +R       +  I      ++ I +P+ G +      +       ++ +++IV       
Sbjct: 340 RR------ERAQIAGTALGRELITAPVDGIVADLHV-TPGEVVDPTKVMVEIV-DPDRVR 391

Query: 330 IRAKVTPKQIQHVKKG-YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           I A +   +I  V+ G  +AT                +  +IDP+          Q    
Sbjct: 392 IEAVIHDPKIA-VRIGAASATTPLLA-DSPHGLTLLGVSPRIDPVDQGIHAIFTPQP--- 446

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                         + +  G P +V      T
Sbjct: 447 ---------GHPPGLRI--GMPVDVHLEVGTT 467


>gi|49473803|ref|YP_031845.1| hypothetical protein BQ01280 [Bartonella quintana str. Toulouse]
 gi|49239306|emb|CAF25633.1| hypothetical protein BQ01280 [Bartonella quintana str. Toulouse]
          Length = 371

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 64/206 (31%), Gaps = 31/206 (15%)

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISRDLEQNQRTFAD 275
           QE  V       +E I   K  ++H N     +    L  +N   E+     + +   AD
Sbjct: 105 QEGDVIAKLDSKKEEIAAAKAKMQHDNSALTLSRILKLRASNTATEVQEIAARLELDNAD 164

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQS-----FSSSNYAQQSQPLMKIVPHSKLTYI 330
            +  L   E   +++TI +PI+G +           + +    + +       +     +
Sbjct: 165 LV--LRNAELDLDRRTIRAPISGVVGILPIGEGTAVTLNTVISRIE-------NRDRILV 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V  + +  + KG   T           K F   I  ID ++  +   L  Q      
Sbjct: 216 DIWVPERYVSRIHKGDEVTATLTA---QPNKTFVGHIYAIDNVVDSKTRTLHVQ------ 266

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFT 416
                +   +    L +G    V   
Sbjct: 267 -----VEIKNEKDTLMSGMSFSVALQ 287


>gi|113968861|ref|YP_732654.1| RND family efflux transporter MFP subunit [Shewanella sp. MR-4]
 gi|113883545|gb|ABI37597.1| efflux transporter, RND family, MFP subunit [Shewanella sp. MR-4]
          Length = 430

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 4/158 (2%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             V K+  E      E   + R        +    A    E+ R + +  +  A+++  L
Sbjct: 156 AEVAKAQAEYINAAAEWNRVRRMSESAVSVSRRMQAQVDAELKRAILEAIKMTAEQIRTL 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
               +      +L+PI G +  + +           PLM++       ++ A++TP Q  
Sbjct: 216 ESTPEAIGSYQLLAPIDGRVQQDIAM-LGQVFTAGTPLMQLT-DESHLWVEAQLTPAQAA 273

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +V  G  A V+          K      ++D +   + 
Sbjct: 274 NVNAGGPALVQVG--DKTLAGKIIGRSHELDSVTRTEQ 309



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 15/136 (11%), Positives = 46/136 (33%), Gaps = 2/136 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDIE-TTDLIDLKKV 101
             ++  ++ + +     +P   + ++   V  G ++ +G PLLT    E      +    
Sbjct: 109 TMATATLVVDRDRTATLAPQLDVRVQARHVVPGQEVKKGEPLLTLGGAEVAKAQAEYINA 168

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           + +  R    +E +       +  V  +   +  E +     +  +  S     G   + 
Sbjct: 169 AAEWNRVRRMSESAVSVSRRMQAQVDAELKRAILEAIKMTAEQIRTLESTPEAIGSYQLL 228

Query: 162 RSLKMKLTRMRSIYLN 177
             +  ++ +  ++   
Sbjct: 229 APIDGRVQQDIAMLGQ 244


>gi|332292237|ref|YP_004430846.1| efflux transporter, RND family, MFP subunit [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332170323|gb|AEE19578.1| efflux transporter, RND family, MFP subunit [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 389

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 4/125 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
             ++G I+ ++ V  IK   SGIIK+  VE G  I  G  +   E +     +   K +I
Sbjct: 49  TVATGSIVPKEEV-LIKPNVSGIIKEIYVEAGDNIKAGDLIAQIEVVPNASSLTNAKNNI 107

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF---LGKYHSTCSKVFNYGISSV 160
              R  ++T K AL    + YD  +  F+       DF      Y+    +V    ++  
Sbjct: 108 AGARTGVETAKLALANQKSIYDRQKALFDKGVISANDFDGIQNSYNQAQQRVKQEQVNFT 167

Query: 161 YRSLK 165
             S  
Sbjct: 168 SASQN 172



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 77/250 (30%), Gaps = 45/250 (18%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           N           +  L++ +      K LF+K  +S ND +  +     S  + ++ + +
Sbjct: 106 NIAGARTGVETAKLALANQKSIYDRQKALFDKGVISANDFDGIQ----NSYNQAQQRVKQ 161

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           ++      ++ YD       + L   +                            I S I
Sbjct: 162 EQVNFTSASQNYDIIKTGTTSGLGNAAT-------------------------TQIRSTI 196

Query: 297 AGTIVYNQSFSSSNYAQQ-----SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
            G I+     + +   +         +  +           KV   ++  +K+     + 
Sbjct: 197 TGMILDVPVKTGNQVIEANNFNDGTTVATLA-DVDKMIFEGKVDESEVGKIKEDLPLEIT 255

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
                ++    F A ++ I P    ++  +Q    +E+      L  ++++  +R G  A
Sbjct: 256 VGAIENMT---FNATLDYIAPKGVAENGAIQ----FEIK---GTLDRTNSDTFIRAGLSA 305

Query: 412 EVLFTAKNTT 421
                 +  T
Sbjct: 306 NASIILEKAT 315


>gi|291384346|ref|XP_002708572.1| PREDICTED: nuclear mitotic apparatus protein 1 [Oryctolagus
           cuniculus]
          Length = 2219

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/209 (9%), Positives = 59/209 (28%), Gaps = 3/209 (1%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE---SREEQLLDFLGKY 145
           + +    ++  +         +  E+   +    +   L    +   S   Q  + L + 
Sbjct: 500 NTQLQARVEKLEAEQGQQEAQLLAERGRFEEEKQQLASLIADLQGSISNLSQAKEELEQA 559

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                   +  ++S+          ++        L+ ++   +A L+  ++    ++  
Sbjct: 560 SQVEGARLSAQVASLTSERTTLQATLQQQDQELASLKQQAQTEQARLTQQEQTAQGLRQQ 619

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            E+ + S     QQ     K     R +  +Q        E +          L+ + ++
Sbjct: 620 VEQLSSSLKQKEQQLEEAAKEQEAARRDHAQQLARAAEEREAHLRERDSVLQQLEALGQE 679

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILS 294
                 T   ++   T            +
Sbjct: 680 KAAALETLQQQLQAATEARDGALASVTQA 708



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 68/207 (32%), Gaps = 8/207 (3%)

Query: 79  LQGTPLLTFEDIET-TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
            +G  L     +ET              L+  ++  ++       +       FE  ++Q
Sbjct: 475 EKGEVLGDVLQVETLKQEAASLAARNTQLQARVEKLEAEQGQQEAQLLAERGRFEEEKQQ 534

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L   +     + S +          S          +      L ++ + L+A L    +
Sbjct: 535 LASLIADLQGSISNLSQAKEELEQAS----QVEGARLSAQVASLTSERTTLQATLQQQDQ 590

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +L  +K   +     Q  L QQE+       ++ +     K   + + E   E      +
Sbjct: 591 ELASLKQQAQTE---QARLTQQEQTAQGLRQQVEQLSSSLKQKEQQLEEAAKEQEAARRD 647

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILE 284
           + ++++R  E+ +    +  S L  LE
Sbjct: 648 HAQQLARAAEEREAHLRERDSVLQQLE 674



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 60/185 (32%), Gaps = 6/185 (3%)

Query: 107  RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            R   + E+S       + +++    E  E   L          ++      +S    L M
Sbjct: 1456 RHREELEQSKQAAGGLRAELMRLQRELGELGPLRQKVAEQERAAQQLRAEKASYAEQLSM 1515

Query: 167  KLTRMRSIYLNRLDLENKSSLLRALLSSH--QKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
                   +      L  + S+ R  L     Q     +++L    A +++ L + +R   
Sbjct: 1516 LKKAHGLLAEENRGLGERVSIGRQFLEVELDQAREKYVQDLASVRADAESRLAEMQREAQ 1575

Query: 225  KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
             +  EL     + +     +     E    F    ++++  LE+  +  AD      + +
Sbjct: 1576 SAARELEVMTAKYEGAKAKV----LEERQRFQEERQKLTAQLEELSKKLADYDQTNKMQQ 1631

Query: 285  KTREQ 289
            +  + 
Sbjct: 1632 QKLKA 1636



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 71/214 (33%), Gaps = 7/214 (3%)

Query: 67   IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
            +K+  +    +  +    L     ET             LR  + + +   +      + 
Sbjct: 1327 LKRLVIAESEKSQKLEERLRLLQAETASSSARAAERSSALREEVQSLREEAEKQRVASEN 1386

Query: 127  LEKAFESREEQLLDFLGKYHSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            L +   S+ E+  +   +  +   K F     +S++          +  +   +   +  
Sbjct: 1387 LRQELASQAERAEELGQELKAWQEKFFQKEQALSALQLEHTSTQALVSELLPAKHLCQQL 1446

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             +   A    H+++L   K         + +L + +R +      LR+ + EQ+   + +
Sbjct: 1447 QAEQAAAEKRHREELEQSKQ-AAGGL--RAELMRLQREL-GELGPLRQKVAEQERAAQQL 1502

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                  +  E  + LK+    L +  R   + +S
Sbjct: 1503 RAEKA-SYAEQLSMLKKAHGLLAEENRGLGERVS 1535


>gi|119774606|ref|YP_927346.1| multidrug resistance efflux pump-like protein [Shewanella
           amazonensis SB2B]
 gi|119767106|gb|ABL99676.1| multidrug resistance efflux pump-like protein [Shewanella
           amazonensis SB2B]
          Length = 326

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 94/266 (35%), Gaps = 27/266 (10%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             I++    L+  L R+++   ++  ++ +S+LL A     +  L          AV + 
Sbjct: 83  SQIANQIEQLEASLLRVKAQEQSQ-GIDLESALLSARFEVRRATL----------AVEKA 131

Query: 215 DLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            L+     E I  K   + +  + +    L   N+   EA  +  + L++++ +  + + 
Sbjct: 132 RLDASVPAEYIAAKEYADNQFKLLQANTELEKANQALKEAIEKRKSSLEQLAIEKRKAE- 190

Query: 272 TFADEMSKLTILEKTREQKTILSPIA-GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +  + L  L+    +  I  P+  G     + + + +  Q  + +  I P       
Sbjct: 191 --VELSAALAALDALELKAEIAGPVIIGRDWNEKKYQAGDTVQFGRQIASI-PALDGLEA 247

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A      +  ++ G    +           + +  +  I      +    Q++ +  V 
Sbjct: 248 SAWANEVDVDKIRLGQAVCLSLDA---KPGLQVQGKVANIGRQAVTKSAWGQSKWF-RVE 303

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFT 416
           + ++D A     +EL  G    V   
Sbjct: 304 VALSDTA----GLELSPGMSVMVEVH 325



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 46/127 (36%), Gaps = 8/127 (6%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G     G  ++ F+  +  + I+  + S+  ++    ++      ++ +  +L   FE 
Sbjct: 67  EGKLARVGDTIVIFDKSQIANQIEQLEASLLRVKAQEQSQG-----IDLESALLSARFEV 121

Query: 134 REEQLLDFLGKYHSTCSKVFNYGIS---SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           R   L     +  ++    +        + ++ L+      ++    +  +E + S L  
Sbjct: 122 RRATLAVEKARLDASVPAEYIAAKEYADNQFKLLQANTELEKANQALKEAIEKRKSSLEQ 181

Query: 191 LLSSHQK 197
           L    +K
Sbjct: 182 LAIEKRK 188


>gi|327396284|dbj|BAK13706.1| multidrug resistance protein MdtA precursor [Pantoea ananatis
           AJ13355]
          Length = 424

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/333 (9%), Positives = 101/333 (30%), Gaps = 25/333 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + + + G ++   +V  + S   G ++K     G ++  G  L   +      
Sbjct: 87  ASTADVPVYLYALGTVIPNASV-TVTSRVDGQLEKVYFTEGQKVEAGQLLAQIDPRSYEA 145

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            ++  +  +      + + +  L     L  +  +  +  +++   +  + G   +  ++
Sbjct: 146 TLNQYQGELSENMALLKSAELTLARYRKLAAQDSLSRQDLDTQIATVGQYRGAVAADQAQ 205

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           + +  ++  Y  +   ++    +         +S+    L++  Q     +     ++ +
Sbjct: 206 IASARLNIGYARITAPVSGRVGLRQVDPGNMIQSASTTGLVTITQMQPAAVTFSVPQSHI 265

Query: 212 S-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---ANYLKEISRDLE 267
                    +R +  +  +        +  ++ I+   D A       A +  +      
Sbjct: 266 PTLVKALHHDRTLPATAFDQDNQHALSQGQVKFISNEIDTATGTITLKAMFANDDEALYA 325

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAG----TIVYNQSFSSSNY-AQQS-----QP 317
                   + S L        Q   LS   G     I  + + +     A  +     Q 
Sbjct: 326 NQFVNLRLQTSVLKGATIIPAQALQLSS-DGSFVFIINKDNTVTRQPVTAGPAYGETWQA 384

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           +++ V                I  +  G   +V
Sbjct: 385 ILQGVKPGDRLVTEG------IDRLTNGSKVSV 411


>gi|325286082|ref|YP_004261872.1| RND family efflux transporter MFP subunit [Cellulophaga lytica DSM
           7489]
 gi|324321536|gb|ADY29001.1| efflux transporter, RND family, MFP subunit [Cellulophaga lytica
           DSM 7489]
          Length = 416

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 55/409 (13%), Positives = 124/409 (30%), Gaps = 111/409 (27%)

Query: 14  PASLKRMTLLSIIGIIGL-ITWSILL--------PIEISVSSSGE----ILNEDNVVEI- 59
           P     + +  ++      I WS  +         + IS  + G+    I    +   I 
Sbjct: 13  PKHYAYIAIGLVVAFAAYKIIWSSSVSTFRTEKDKLSISAVTQGKFDDYITINGSAAPIA 72

Query: 60  ----KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
                +   G + +  +E G+ + +G  +L  E+               NL   I   +S
Sbjct: 73  TIYMDAYEGGRVTEKLIEEGAMVKKGDIILKLEN--------------SNLYEQILASES 118

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            L    N     +  F+SR                                         
Sbjct: 119 NLALKQNDLRSTKLTFDSR----------------------------------------- 137

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
             +++     +     L+  +++    + L++   +S+           K   EL    H
Sbjct: 138 --QVEGRKSLATASYELTRLKRNYEQNQELYKDGLISKEAFL-----TAKENYELSLKQH 190

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
               +    ++     +L   +       DL + Q+T +    +L       +   + +P
Sbjct: 191 NIVKIQTEQDDKMRRTSLAGLD------TDLNRMQKTLSMVYERL-------DHLNVRAP 237

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKI-VPHSKLTYIRAKVTPKQIQHVKKGYTAT----- 349
             G + +  +        Q Q + +I V       I A++    I  VK+   A+     
Sbjct: 238 ADGQLGFLDA-EIGQSINQGQRIGQINVLTDYK--IEAEIDEHYIDRVKRDLNASFERNG 294

Query: 350 ----VRFPHYADIREKKFKAIIEKIDPI-ISQQDNNLQTQEYYEVILKI 393
               +R          + +    K+D +  +++  N++  + + V L++
Sbjct: 295 KTYNLRL----RKVYPEVRGGKFKVDLVFTAEKPENIRAGQSFNVKLQL 339


>gi|320181333|gb|EFW56252.1| Putative membrane protein [Shigella boydii ATCC 9905]
          Length = 285

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 59  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 117

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 118 AEELDTANLNVKAMQASVDAAQATLKQTQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 176

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 177 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 227

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 228 RAIYDQS 234



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQGSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVDAAQATLKQTQWQLAQTEIRA 156


>gi|260779069|ref|ZP_05887961.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260605233|gb|EEX31528.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 343

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 70/212 (33%), Gaps = 23/212 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VS+ ++            +    + +Q      + ++  E   +         +D +Q +
Sbjct: 79  VSKGEVL------ASLNPDEYSLLAKQAEAQYRLADVQYERYKKLRVDKVVSEQDFDQAK 132

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  + L           +++P  GTI    + +   Y    + +M I   ++L  +
Sbjct: 133 ANHNSAKASLEQARANLRYTKLVAPYDGTISIIPAENY-EYIAAKEGVMNIQ-TNQLMKV 190

Query: 331 RAKVTPKQIQHVKKG--YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           + ++    +     G   TAT++F  + +         +          + + +T  Y  
Sbjct: 191 QFQLPDHLLNRFASGINLTATMKFDAFPENSYDLTFQEV--------DTEADPKTGSY-- 240

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              K+T +     +I +  G   EV     +T
Sbjct: 241 ---KVTMVMERPTDIGILPGMAGEVHVKVDST 269


>gi|114331012|ref|YP_747234.1| hypothetical protein Neut_1010 [Nitrosomonas eutropha C91]
 gi|114308026|gb|ABI59269.1| secretion protein HlyD family protein [Nitrosomonas eutropha C91]
          Length = 346

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 83/293 (28%), Gaps = 35/293 (11%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E  F +   ++     + +          +      L    +  R   + +         
Sbjct: 69  EGDFVAAGTRVATLDAQPYQEAFAAAEASVQVAQAELAKMHSGSRPQEVAQA--REALKQ 126

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +AL    +++    + L    A SQ D++       ++   ++              + 
Sbjct: 127 AQALAYQTERNYARARKLLPSKASSQQDVDNTRAARDRAVAGVKAATAALSQAEEGFRK- 185

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                            D+   +   A  M+             + +P  GT++  +   
Sbjct: 186 ----------------EDIAAAEARLAAAMAARDQAATALADTELFAPSNGTVIA-RIRE 228

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
             +       +  +       Y+RA +    +  +  G    VR    +D  EK +   I
Sbjct: 229 PGSMVTSQNTIYNLS-LDYPVYVRAYINETVLGRIAPGTPVRVR----SDSSEKTYHGQI 283

Query: 368 EKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             I P       + +   L+T   Y + + + D   +     LR G P  V  
Sbjct: 284 GFISPRAEFTPKTVETIELRTDLVYRLRIVVNDADPA-----LRQGMPVTVTV 331



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 12/127 (9%), Positives = 38/127 (29%), Gaps = 4/127 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++   + G  +  GT + T +     +     + S++  +  +    S     +   
Sbjct: 60  GRVEQVLFDEGDFVAAGTRVATLDAQPYQEAFAAAEASVQVAQAELAKMHSG----SRPQ 115

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +V +     ++ Q L +  + +   ++      +S  + +                    
Sbjct: 116 EVAQAREALKQAQALAYQTERNYARARKLLPSKASSQQDVDNTRAARDRAVAGVKAATAA 175

Query: 185 SSLLRAL 191
            S     
Sbjct: 176 LSQAEEG 182


>gi|134287671|ref|YP_001109837.1| RND family efflux transporter MFP subunit [Burkholderia
           vietnamiensis G4]
 gi|134132321|gb|ABO60056.1| efflux transporter, RND family, MFP subunit [Burkholderia
           vietnamiensis G4]
          Length = 509

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 55/182 (30%), Gaps = 35/182 (19%)

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L E SR   +        ++ L    K +    + SP +G +               Q L
Sbjct: 192 LLEASRARMRALSIPDGIIASLDRTGKAQTHVLLTSPESGVVSELNVR-DGAMVAPGQTL 250

Query: 319 MKIVPHSKL-TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            KI   SKL   +   +       V+ G T       +A    + F   I +I P IS  
Sbjct: 251 AKIAGLSKLWLIVE--IPEALALGVQPGMTVD---ATFAGDPTQHFNGRIREILPGISTT 305

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGF-----------------PAEVLFTAKNT 420
              LQ        L+I      +   +L  G                  P+E + T    
Sbjct: 306 SRTLQ------ARLEID-----NAGFKLTPGMLMRVRVAGQKAVSRLLVPSEAVITTGKR 354

Query: 421 TL 422
           ++
Sbjct: 355 SV 356



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTF 87
           SP SG++ +  V +G+ +  G  L   
Sbjct: 227 SPESGVVSELNVRDGAMVAPGQTLAKI 253


>gi|301758450|ref|XP_002915085.1| PREDICTED: LOW QUALITY PROTEIN: desmoplakin-like [Ailuropoda
            melanoleuca]
          Length = 3079

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 77/210 (36%), Gaps = 10/210 (4%)

Query: 91   ETTDLIDLKK-VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
             +    D  K  +I  LR  +    S    L    + L++  E+  +++  F  +     
Sbjct: 1948 RSRSEADSDKNTTIAELRSQLQISNSRTLELQGLINDLQRERENLRQEIEKFQKQALEAS 2007

Query: 150  SKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            +++       + V +  +  L +++ +  ++  L+     L  L ++ + +  + + L  
Sbjct: 2008 NRIQESKNQCTQVVQERESLLVKIKVLEQDKSRLQRLEDELTRLKTTLEAESRLKQRLEC 2067

Query: 208  KNAVSQNDLNQQERIVYKSTLELRE-------NIHEQKNMLRHINELYDEANLEFANYLK 260
            +    Q DLNQ +    +    +R+       +  E+ +    I  L  E       Y +
Sbjct: 2068 EKQQIQTDLNQWKTQYSRKEETIRKIESEREKSEREKNSFRSEIERLQAEIKRIEERYRR 2127

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQK 290
            ++     + Q     E S+L       +Q+
Sbjct: 2128 KLEDSTRETQSQLETERSRLQREIDKLKQR 2157



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 83/224 (37%), Gaps = 23/224 (10%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             + ++  + S+K     I +    L+  +      E     + + L   L     T  ++
Sbjct: 1807 EEELEGMRRSLKEQAIRITSLTQQLEQASIVKKRSEDDLRQQRDVLDGHLRDKQRTQEEL 1866

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLN----RLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               +  + ++ R L  +   ++  +L     +  +E+KS  L       ++  ++ +NL 
Sbjct: 1867 RRLSSEVEALRRQLLQEQENLKQAHLRNEHFQKAIEDKSRSLNESKIEIERLQSLTENLT 1926

Query: 207  EKNAVSQNDLN-------QQERIVYKSTLELRENIHEQKNMLR-------HINELYDEAN 252
            +++ + + +L        +  R   ++  +    I E ++ L+        +  L ++  
Sbjct: 1927 KEHLMLEEELRNLRLEYDELRRSRSEADSDKNTTIAELRSQLQISNSRTLELQGLINDLQ 1986

Query: 253  LEFANYLKEI---SRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             E  N  +EI    +   +      +  ++ T + + RE   + 
Sbjct: 1987 RERENLRQEIEKFQKQALEASNRIQESKNQCTQVVQERESLLVK 2030



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/240 (12%), Positives = 77/240 (32%), Gaps = 31/240 (12%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS----------------ALDFLNNKYDVL 127
            L    D E +    L++ + K  R   + +K+                 L  L   YD +
Sbjct: 1702 LKQLIDTEMSARKCLEEENAKLQRAQYELQKAHSGATEMIGKLKVQEQELTRLRLDYDRV 1761

Query: 128  EKAFESREEQLLDFLGKYHSTCSKVFN------------YGISSVYRSLKMKLTRMRSIY 175
             +    +++ +  F         +                    +   L+     ++   
Sbjct: 1762 SQERTLKDQDIARFQSSLKDLQLQKQKVEEXRRTASEDSAKRKKLEEELEGMRRSLKEQA 1821

Query: 176  LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
            +    L  +      +    + DL   +++ + +   +    ++ R +      LR  + 
Sbjct: 1822 IRITSLTQQLEQASIVKKRSEDDLRQQRDVLDGHLRDKQRTQEELRRLSSEVEALRRQLL 1881

Query: 236  EQKNMLRHI---NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            +++  L+     NE + +A  + +  L E   ++E+ Q    +   +  +LE+      +
Sbjct: 1882 QEQENLKQAHLRNEHFQKAIEDKSRSLNESKIEIERLQSLTENLTKEHLMLEEELRNLRL 1941



 Score = 43.1 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 70/208 (33%), Gaps = 4/208 (1%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            +         L   K+      R  ID        L+ +   L+       E L     +
Sbjct: 1586 INITKTTIHQLTLQKEEDTSGYRAQIDGLTRENRSLSEEVKRLKSTLAQTTETL--RRVE 1643

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMMK 203
              +   K     +S   + L+++L ++  +     +  +         +    K++  +K
Sbjct: 1644 ETAQQQKATGTEVSQRKQQLEIELRQVTQMRTEESVRYKQSLDDAAKTIQEKNKEIERLK 1703

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L +    ++  L ++   + ++  EL++       M+  +     E      +Y + +S
Sbjct: 1704 QLIDTEMSARKCLEEENAKLQRAQYELQKAHSGATEMIGKLKVQEQELTRLRLDYDR-VS 1762

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++     +  A   S L  L+  +++  
Sbjct: 1763 QERTLKDQDIARFQSSLKDLQLQKQKVE 1790


>gi|291544314|emb|CBL17423.1| chromosome segregation protein SMC, common bacterial type
           [Ruminococcus sp. 18P13]
          Length = 1188

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/235 (11%), Positives = 74/235 (31%), Gaps = 15/235 (6%)

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G ++   T  L F+   T D +   +  +  L      +++  +    +    ++  E  
Sbjct: 701 GERLKAETDKLRFDLDSTRDALSQAQTEVIRLTADRTAKQALAESARQQAATQQERVEQA 760

Query: 135 EEQLLDFLGKYHSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL- 191
           ++ L             +      I+   ++L  +      +   R  L  + + L+   
Sbjct: 761 KQSLARQEQLLAEATRALEQVDQSIARQEQALSAQQDLRSGLQQAREALSAQLAKLKLGQ 820

Query: 192 ------LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                   S +++L  M+   E++      L+   +   +  ++  + I   +  L  + 
Sbjct: 821 MECVKDQESARRELENMQQSAEQSESRAAQLHAMLKEAEQLIVQKEQAIAHSRETLSRMQ 880

Query: 246 ELYDEANLEFA------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              +    E        +  ++    L +  R   +   K        +++ I +
Sbjct: 881 AETEACRQEITRLQGQHDSQQQYINQLREGMRAINEAKEKRAGEAMRIDERKITA 935



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 83/261 (31%), Gaps = 34/261 (13%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE------SREEQL 138
           LT +      L +  +      +  ++  K +L           +A E      +R+EQ 
Sbjct: 732 LTADRTAKQALAESARQQAATQQERVEQAKQSLARQEQLLAEATRALEQVDQSIARQEQA 791

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           L       S   +      + + +    ++  ++     R +LEN         S   + 
Sbjct: 792 LSAQQDLRSGLQQAREALSAQLAKLKLGQMECVKDQESARRELENMQQSAEQSESRAAQL 851

Query: 199 LTMMKN-----LFEKNAV--SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE----- 246
             M+K      + ++ A+  S+  L++ +        E+     +  +  ++IN+     
Sbjct: 852 HAMLKEAEQLIVQKEQAIAHSRETLSRMQAETEACRQEITRLQGQHDSQQQYINQLREGM 911

Query: 247 -LYDEANLEFANYLKEISR--------------DLEQNQRTFADEMSKLTI-LEKTREQK 290
              +EA  + A     I                 L +       E  +L   LE  ++ +
Sbjct: 912 RAINEAKEKRAGEAMRIDERKITAQKDYDSLIMQLLETYELTRSEAEQLAEPLEDLQKAQ 971

Query: 291 TILSPIAGTIVYNQSFSSSNY 311
             L+ I G I    + +    
Sbjct: 972 QTLAQIKGRIKALGNVNVGAI 992



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 83/276 (30%), Gaps = 32/276 (11%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G       ++EI+   + +     V                       I   +  I  
Sbjct: 280 AMGVERLRGQILEIEQNSAAVKADIAVSEND-------------------IQHSRAQIAQ 320

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY--RS 163
                  E+ +   L  +    ++     E+   DF  +              +    ++
Sbjct: 321 AEESHAAEQLSRTELTERIQAQQQRIAQLEQDAKDFAAQIQEAQQAFAAQEQEAAAAGKA 380

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                + + ++YL +          R  ++  ++ L   ++   + A            +
Sbjct: 381 YDEAGSAVNALYLEQSQHRFTQQAAREQITQLKQTLEGGEDTAARQAEQSAAYETALEQL 440

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE------ISRDLEQNQRTFADEM 277
            +   + +  I EQ+N L     LYD    + A   K+        R+ +Q +R   D  
Sbjct: 441 SRQLEQAQNRIREQENRLGGYQRLYDSKMQKLAQQRKDWEAATLRLREKQQRRRLLQDLE 500

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           + +    ++ ++  + +  +G I         + AQ
Sbjct: 501 NSMEGFGRSIKE-ILRAGKSGRISGIH----GSVAQ 531


>gi|170767008|ref|ZP_02901461.1| inner membrane protein YibH [Escherichia albertii TW07627]
 gi|170124446|gb|EDS93377.1| inner membrane protein YibH [Escherichia albertii TW07627]
          Length = 378

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 81/244 (33%), Gaps = 9/244 (3%)

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
               Q+   + +     +++   G             R+  +  + +   +    LRA L
Sbjct: 65  PITPQVTGIVSEVTDKNNQLIQKGEVLFKLDPVRYQARVARLQADLMTATHNVKTLRAQL 124

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +  Q + T +    ++   +     +  +       E   +I + +      + L   + 
Sbjct: 125 AEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSE--RDIDDARQNFLAQDALVKGSI 182

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            E A    ++   +   Q       ++LT  E    Q  + +P  G +          YA
Sbjct: 183 AEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAEYNLAQTIVRAPSNGYVTQVLIR-PGTYA 241

Query: 313 Q--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                +P+M  +P  K   + A+     +  ++ G  A V F        + F+  + +I
Sbjct: 242 AALPLRPVMVFIPEQKRQIV-AQFRQNSLLRLEAGDEAEVVFNALP---GQVFRGKLTRI 297

Query: 371 DPII 374
            P++
Sbjct: 298 LPVV 301



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 71/217 (32%), Gaps = 15/217 (6%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI-------KNLRCHID 111
           I    +GI+ +   +N   I +G  L   + +     +   +  +       K LR  + 
Sbjct: 66  ITPQVTGIVSEVTDKNNQLIQKGEVLFKLDPVRYQARVARLQADLMTATHNVKTLRAQLA 125

Query: 112 TEKSALDFLNNKYDVL----EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++    ++ + D L    ++  +  +  +  F  +      + F    + V  S+  +
Sbjct: 126 EAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFSERDIDDARQNFLAQDALVKGSIAEQ 185

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIVYKS 226
                 +       +++   LRA L+  + +L            V+Q  +       Y +
Sbjct: 186 AQIQSQLDSMVNGEQSQIVSLRAQLTEAEYNLAQTIVRAPSNGYVTQVLI---RPGTYAA 242

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L LR  +       R I   + + +L       E  
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLEAGDEAE 279


>gi|167616770|ref|ZP_02385401.1| multidrug resistance protein [Burkholderia thailandensis Bt4]
          Length = 387

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 74/241 (30%), Gaps = 12/241 (4%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            ++    +   T + V       V     +                 + +     +++ +
Sbjct: 57  NVVQIAAQIQGTVTDVLVADTQQVKAGQALVKLDDADASAAFAQARAQLAQAVRQVANTR 116

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             + M +   +     + DL   ++          E +  ++      +    +A L  A
Sbjct: 117 LSMGMYEETVK---AREADLKLAQQAYRARAGASVEVVAPEELARAKSSLANAQAALAGA 173

Query: 257 NYLKEISRDL-----EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               E +R L      +         ++  +  +   + TI+SP+ GT+   +S      
Sbjct: 174 QAQLEAARALGSERPVEQNPAVQQAAAQFKLAYRNLRRTTIVSPVDGTV-GQRSVQIGQQ 232

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                PLM +V   +  ++ A     QI+H++ G    +    Y       +   +E   
Sbjct: 233 VGPGVPLMSVV-QLRQVWVEANFKEGQIRHMRVGQPVRLESDLYGARVT--YHGRVEGFS 289

Query: 372 P 372
            
Sbjct: 290 A 290



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 60/180 (33%), Gaps = 12/180 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-------SIK 104
              NVV+I +   G +    V +  Q+  G  L+  +D + +      +         + 
Sbjct: 54  VAGNVVQIAAQIQGTVTDVLVADTQQVKAGQALVKLDDADASAAFAQARAQLAQAVRQVA 113

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           N R  +   +  +        + ++A+ +R    ++ +       +K       +     
Sbjct: 114 NTRLSMGMYEETVKAREADLKLAQQAYRARAGASVEVVAPEELARAKSSLANAQAALAGA 173

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + +L   R++   R   +N +        +  +     +NL     VS  D    +R V 
Sbjct: 174 QAQLEAARALGSERPVEQNPAVQ-----QAAAQFKLAYRNLRRTTIVSPVDGTVGQRSVQ 228


>gi|126642841|ref|YP_001085825.1| NolF secretion protein [Acinetobacter baumannii ATCC 17978]
 gi|126388725|gb|ABO13223.1| NolF secretion protein [Acinetobacter baumannii ATCC 17978]
          Length = 372

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 82/241 (34%), Gaps = 11/241 (4%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             K      +           +       +R++  + +  +  ++      +  QK    
Sbjct: 38  EAKKIELIPQDLIPVKEGSLAAQTAFTGTIRAVQQSSIQAQVSATATAVTANVGQKVQKG 97

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              +   N  +   L Q +  +  +  +     +      R +N+ +  A +EF     +
Sbjct: 98  QVLVRLNNQDNAARLAQAQANLASAQAQAELARNLMNRKQRLLNQGFI-ARVEFEQSQVD 156

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
               LE  +   A+    + I +K      I SPI+G I   Q           Q L +I
Sbjct: 157 YKGQLESVRAQQAN----VDIAKKADRDGIITSPISGVITKRQV-EPGQTVSVGQTLFEI 211

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V +     I+AK+  +Q   +K G +   +         K+  AI+ +I P+  Q    +
Sbjct: 212 V-NPDQLEIQAKLPIEQQSALKVGSSIQYQI----QGNSKQLHAILTRISPVADQDSRQI 266

Query: 382 Q 382
           +
Sbjct: 267 E 267



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 39/100 (39%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I++  S          G ++ +G  L+   + +    +   + ++ + +   +  ++ ++
Sbjct: 75  IQAQVSATATAVTANVGQKVQKGQVLVRLNNQDNAARLAQAQANLASAQAQAELARNLMN 134

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                 +    A    E+  +D+ G+  S  ++  N  I+
Sbjct: 135 RKQRLLNQGFIARVEFEQSQVDYKGQLESVRAQQANVDIA 174


>gi|116253961|ref|YP_769799.1| HlyD family secretion transport protein [Rhizobium leguminosarum
           bv. viciae 3841]
 gi|115258609|emb|CAK09713.1| putative HlyD family secretion transport protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 379

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 59/190 (31%), Gaps = 17/190 (8%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            ++ L   E   E  +++   N+   + N+   + L++ S   +Q   T    +S L   
Sbjct: 112 AEANLAAAEKGVETADLVNKRNQQLFDKNVSPKSQLEQASLSYDQAVSTRDAAVSALDQA 171

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +       + +   G +    +           P++  V       ++  V    I   K
Sbjct: 172 KNQVSYAELKADHNGIVTTINAD-VGQVVASGTPVVA-VAVDGEKEVQIAVPENDIAEFK 229

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G T    F     +        + ++     QQ         + V + +       N+ 
Sbjct: 230 PGKTVRASFWADDRL---VLDGKVREVSGSADQQSRT------FAVRVSL------PNDP 274

Query: 404 ELRNGFPAEV 413
           ++  G  A +
Sbjct: 275 QVLLGMTATI 284



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 4/86 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V+ G ++  G  L   +  +    +   + ++      ++T     D +N + 
Sbjct: 78  GKITERLVDIGDKVKPGDVLARMDSTDYQLAVKTAEANLAAAEKGVET----ADLVNKRN 133

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCS 150
             L     S + QL      Y    S
Sbjct: 134 QQLFDKNVSPKSQLEQASLSYDQAVS 159


>gi|71280743|ref|YP_270181.1| RND family efflux transporter MFP subunit [Colwellia
           psychrerythraea 34H]
 gi|71146483|gb|AAZ26956.1| efflux transporter, RND family, MFP subunit subfamily [Colwellia
           psychrerythraea 34H]
          Length = 421

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 58/156 (37%), Gaps = 6/156 (3%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I +   G +++  V+ G+ + QG  +L   +      +  ++  +     ++   + AL+
Sbjct: 79  IDTIDGGRVEEVFVQEGALVKQGQAILKLSNTNLQLNVLAREAEVSEQINNMRNTRLALE 138

Query: 119 --FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              L+ K DV+E  F     Q      K       +       V   L  ++    ++  
Sbjct: 139 QNQLSLKRDVIELDFSVLRLQKDFNRHKALIEKKIISQQAFERVEDELAFQIKYRETVKE 198

Query: 177 NRLDLE----NKSSLLRALLSSHQKDLTMMKNLFEK 208
           ++         + + L   + + Q +L + ++  +K
Sbjct: 199 SQEKEAILQSQQLAQLEQSIQTLQSNLAISRSSLDK 234



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 90/273 (32%), Gaps = 33/273 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL--EKAFESREEQLLDFLGKYH 146
           D   T  ++ + + +  ++    TE   L  L    + +  +     R E++    G   
Sbjct: 39  DTGKTYNVEKQNLVLDTVKQSTFTEFLPLRGLVQPEETIFIDTIDGGRVEEVFVQEGALV 98

Query: 147 STCSKVFN-----------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                +                + V   +        ++  N+L L+     L   +   
Sbjct: 99  KQGQAILKLSNTNLQLNVLAREAEVSEQINNMRNTRLALEQNQLSLKRDVIELDFSVLRL 158

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           QKD    K L EK  +SQ    + E  +    ++ RE + E +     +           
Sbjct: 159 QKDFNRHKALIEKKIISQQAFERVEDELA-FQIKYRETVKESQEKEAILQ---------- 207

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                  S+ L Q +++     S L I   + ++  I +P AG + +  +       +  
Sbjct: 208 -------SQQLAQLEQSIQTLQSNLAISRSSLDKLIIRAPKAGQLTFLDAR-VGESKRDG 259

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + L + V       + A+V    +  V KG  A
Sbjct: 260 ERLGQ-VDLIDQYKVSAQVDEFYVSRVAKGQIA 291


>gi|283778648|ref|YP_003369403.1| hypothetical protein Psta_0858 [Pirellula staleyi DSM 6068]
 gi|283437101|gb|ADB15543.1| hypothetical protein Psta_0858 [Pirellula staleyi DSM 6068]
          Length = 528

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 91/256 (35%), Gaps = 31/256 (12%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           +L+N+ +L +  ++  +  +   +      A S  +L   ++    S +E+ +NI + + 
Sbjct: 155 ELDNRDALAKRKIAEGELSVATTQ------AESTAELEAAQKAAEVSKIEMDQNI-QIRA 207

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS-----KLTILEKTREQKTILS 294
                    D     F          + +  R  A   +     ++   +   +++ I +
Sbjct: 208 KNPDAVSDLDMRRSRFQFDRALAQIKVAEVDRVVAQLTTVVKSTQVEAADNEIQRRRIAA 267

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV-----TPKQIQHVKKGYTAT 349
           P  G +V         + Q  +P++++V       +   V     TP ++     G    
Sbjct: 268 PQKGVVVEV-FKKVGEWVQPGEPILRLV-RLDRVRVEGFVLADEATPSEVA----GKPVE 321

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           V   H +  + +  + +I+ + PI+     + Q    + V  ++ +    + +  ++ G 
Sbjct: 322 VTV-HLSRGKTEVVRGVIDFVSPIVEGTGRSRQ----FRVWAEV-ENRLLEGHYVIQPG- 374

Query: 410 PAEVLFTAKNTTLAQE 425
            A        T +   
Sbjct: 375 -ASADLRIDKTYVGTY 389



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 52/160 (32%), Gaps = 14/160 (8%)

Query: 45  SSSGEILNEDNVVE------IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +  G ++    +V       + +   G +    V+ G  +L+G  L   ++ +      +
Sbjct: 108 TGPGVVVVPHGLVTAFDDIRVPAREPGTLMSLVVKGGESVLEGDILGELDNRDALAKRKI 167

Query: 99  KKVSI------KNLRCHIDTEKSALDFLNNKYD--VLEKAFESREEQLLDFLGKYHSTCS 150
            +  +            ++  + A +    + D  +  +A        LD          
Sbjct: 168 AEGELSVATTQAESTAELEAAQKAAEVSKIEMDQNIQIRAKNPDAVSDLDMRRSRFQFDR 227

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +    ++ V R +    T ++S  +   D E +   + A
Sbjct: 228 ALAQIKVAEVDRVVAQLTTVVKSTQVEAADNEIQRRRIAA 267


>gi|157962012|ref|YP_001502046.1| secretion protein HlyD family protein [Shewanella pealeana ATCC
           700345]
 gi|157847012|gb|ABV87511.1| secretion protein HlyD family protein [Shewanella pealeana ATCC
           700345]
          Length = 354

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 67/220 (30%), Gaps = 24/220 (10%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   +     + ++ +    +     L          A L+  Q     +K L  K  + 
Sbjct: 96  FQAQLDEARAAYEVAIQNNAASDDAILAASANVRSAVAQLTDAQATYQRIKQLVAKQLLP 155

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
              L+     +  +     EN+   +  +  + +             K  +         
Sbjct: 156 AQQLDDARAKLSSAE----ENVIAARATMSQLIKTQGAQGNAAPEVKKAAAAL------- 204

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
                   +    +     I +P +GT+    + +  +     Q L+ +V  +   +++A
Sbjct: 205 --------SQASLSLSYTNIFAPKSGTLGKLTAHA-GSVVSVGQALVPLVEAN-TYWVQA 254

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                Q++ + KG  AT+    Y  +        IE I P
Sbjct: 255 NFKETQLELITKGMQATITLDLYPSVDY---HGTIEAISP 291



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 40/139 (28%), Gaps = 13/139 (9%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              N++ I     G +      +  ++ QG  L+  +       +D              
Sbjct: 56  VHANIIYIAPQVHGKVISVNASDYQEVSQGDLLVQIDPAPFQAQLDE---------ARAA 106

Query: 112 TEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            E +  +   +   +L  +   R    QL D    Y      V    + +  + L     
Sbjct: 107 YEVAIQNNAASDDAILAASANVRSAVAQLTDAQATYQRIKQLVAKQLLPA--QQLDDARA 164

Query: 170 RMRSIYLNRLDLENKSSLL 188
           ++ S   N +      S L
Sbjct: 165 KLSSAEENVIAARATMSQL 183


>gi|116624560|ref|YP_826716.1| RND family efflux transporter MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116227722|gb|ABJ86431.1| efflux transporter, RND family, MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 444

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 51/335 (15%), Positives = 104/335 (31%), Gaps = 31/335 (9%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG--KY 145
           E+ E      ++  ++             + F  N+  V+ K     +  L+      K 
Sbjct: 28  EEKEAEAPPGVQVTAVTQDTIRRVVAGDGVLFPLNQSSVVPKISAPVQRFLVQRGDHVKQ 87

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL--LSSHQKDLTMMK 203
               + + N  +++     K +L + ++   +    +   S+++A   + S ++     K
Sbjct: 88  GQLLAVLENRDLAAAEGESKAQLDQAQANLRSTTSAQVPESVVKAQTDVDSARQAEDAAK 147

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L E     +  L QQ  +  K   +      +      H   L  + +L     + +  
Sbjct: 148 KLLEN----RQKLLQQGALARKLVDD-----AQVAYAQAHAASLSAQEHLRVLQSVGK-Q 197

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             ++  +       + L   E       I SPIAG I     ++    A Q  PL+ +V 
Sbjct: 198 EQIKTAEAQVDAARNHLQSSEAQVGYSQIRSPIAGVIADRPLYA-GEMAAQGTPLL-VVM 255

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                  R  V   Q   VK G  A+            K +  +  + P        +Q 
Sbjct: 256 DISKVIARVNVPQNQAATVKVGQPAS--LTQVDSDI--KVEGKVVVVSPATDPNSTTVQ- 310

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                V ++       +    L+ G         +
Sbjct: 311 -----VWVQAD-----NPGEVLKPGTSVHAAIMTE 335



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 55/175 (31%), Gaps = 16/175 (9%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I   V+  G +   +    +    S  +++F V+ G  + QG  L   E+ +        
Sbjct: 48  IRRVVAGDGVLFPLNQSSVV-PKISAPVQRFLVQRGDHVKQGQLLAVLENRDLAAAEGES 106

Query: 100 KVSIKNLRCHIDT------------EKSALDFLNNKYDVLEKAFESREEQLLD---FLGK 144
           K  +   + ++ +             ++ +D      D  +K  E+R++ L         
Sbjct: 107 KAQLDQAQANLRSTTSAQVPESVVKAQTDVDSARQAEDAAKKLLENRQKLLQQGALARKL 166

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                        +S+     +++ +           E +    R  L S +  +
Sbjct: 167 VDDAQVAYAQAHAASLSAQEHLRVLQSVGKQEQIKTAEAQVDAARNHLQSSEAQV 221


>gi|332532608|ref|ZP_08408485.1| putative lipoprotein component of a efflux transporter
           [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038029|gb|EGI74477.1| putative lipoprotein component of a efflux transporter
           [Pseudoalteromonas haloplanktis ANT/505]
          Length = 389

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 44/113 (38%), Gaps = 3/113 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA---LDFL 120
           SGII   + + G  + QG  L   +      ++   K  IK+    ++  KS       L
Sbjct: 70  SGIIDSIEFKEGDVVKQGDVLFQLDARPFAAVVASLKAQIKSAEAALEQAKSEDKRAVRL 129

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            ++  +  +  ++R   L     +  +  +++ +  +   + S+   +  + S
Sbjct: 130 LDRKAISTEQAQARTSTLRQREAQLSALQAQLTSAELDLEFTSVVSPIDGIIS 182



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 39/108 (36%), Gaps = 7/108 (6%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           +   +  +  +   L +   E K  +R ++          A      +  L Q +   + 
Sbjct: 102 VASLKAQIKSAEAALEQAKSEDKRAVRLLDRKAISTEQAQAR-----TSTLRQREAQLSA 156

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK-IV 322
             ++LT  E   E  +++SPI G I      +  N     Q ++  IV
Sbjct: 157 LQAQLTSAELDLEFTSVVSPIDGIISRANI-TKGNNVLAGQSVLTSIV 203


>gi|325124512|gb|ADY84035.1| putative secretion protein (HlyD family) [Acinetobacter
           calcoaceticus PHEA-2]
          Length = 446

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 79/232 (34%), Gaps = 32/232 (13%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDL 266
             ++Q D   QE  +  S   ++    ++   +  +NE   E   +   Y ++     DL
Sbjct: 87  QLIAQIDSTTQENSLKTSDANIKNLEAQRLQQVASLNEKQLEYRRQQQMYAQDATPRADL 146

Query: 267 EQNQRTFADEMSKLTILEKTRE--------------QKTILSPIAGTIVYNQSFSSSNYA 312
           E  + ++    +++  L+   E                 I++P  GT+V           
Sbjct: 147 ESAEASYKTAQAQIKALDAQIESAKVTKSTAQTNIGYTRIVAPTDGTVVAI-VTEEGQTV 205

Query: 313 QQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +Q    IV  +  +   I+A+V+   I  V+KG      F    D  ++       + 
Sbjct: 206 NANQSAPTIVKIAKLQNMTIKAQVSEADIMKVEKGQQVY--FTTLGDETKRYATLRQIEP 263

Query: 371 DPIISQQDNNLQTQE------YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            P     ++   T        YY  +  +      + + +LR    A+V   
Sbjct: 264 APDSISSESTSTTSSTTSSAVYYNALFDVP-----NTDGKLRIDMTAQVYIV 310



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 56/150 (37%), Gaps = 10/150 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     ++ + +  SG +KK  V+ G Q+ QG  +   +     + +   
Sbjct: 46  IENNVLATGTLDA-TKLISVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSTTQENSLKTS 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +IKNL      + ++L+         EK  E R +Q +           +       +
Sbjct: 105 DANIKNLEAQRLQQVASLN---------EKQLEYRRQQQMYAQDATPRADLESAEASYKT 155

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               +K    ++ S  + +   +      R
Sbjct: 156 AQAQIKALDAQIESAKVTKSTAQTNIGYTR 185


>gi|323435970|ref|ZP_01049335.2| efflux transporter, RND family, MFP subunit [Dokdonia donghaensis
           MED134]
 gi|321496285|gb|EAQ39307.2| efflux transporter, RND family, MFP subunit [Dokdonia donghaensis
           MED134]
          Length = 389

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 86/264 (32%), Gaps = 14/264 (5%)

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
               E  +++ L  K + L+    +  +QL            +            L   +
Sbjct: 28  EALLESGSVEELQAKQESLKADVAATNDQLAQIEKVLEEKNPR-------EKKEVLITTM 80

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           T   +++ + ++++      + +L   +   T+ + + ++       + + + +      
Sbjct: 81  TVKDTLFNHFIEVQGNVETKQNVLIYPEYQGTLSRVVVKEG----QRVRKGQTLARIDDG 136

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            L   + + ++ L  + +   E      +          Q +  +    + ++ ++    
Sbjct: 137 GLSSQVAQMESQLA-LAKTTFERQQRLWDQKIGSEIQYLQAKTQYESSQNMVSQIKSQLG 195

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + T+ +P +G I                 L +IV +    Y+ A++    +  V  G   
Sbjct: 196 KTTVTAPFSGVI-DEVITDQGTVVAPGMALFRIV-NLDNMYVAAEIPESYLPTVTAGKKV 253

Query: 349 TVRFPHYADIREKKFKAIIEKIDP 372
            V FP   +  E   +     I P
Sbjct: 254 KVEFPVLGESVETTVRQTGNYIKP 277



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 29/73 (39%), Gaps = 1/73 (1%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             G +  + NV  I   + G + +  V+ G ++ +G  L   +D   +  +   +  +  
Sbjct: 93  VQGNVETKQNV-LIYPEYQGTLSRVVVKEGQRVRKGQTLARIDDGGLSSQVAQMESQLAL 151

Query: 106 LRCHIDTEKSALD 118
            +   + ++   D
Sbjct: 152 AKTTFERQQRLWD 164


>gi|308049821|ref|YP_003913387.1| secretion protein HlyD family protein [Ferrimonas balearica DSM
           9799]
 gi|307632011|gb|ADN76313.1| secretion protein HlyD family protein [Ferrimonas balearica DSM
           9799]
          Length = 316

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/354 (11%), Positives = 99/354 (27%), Gaps = 79/354 (22%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           ++    V  G  +  G  L+  +D +   ++                 ++  + +  + +
Sbjct: 42  VVVSLPVAQGQTVETGQVLVQLDDRQQRSVVA----------------RAEAEVIRAQAN 85

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           + +    +REE++     +     + + +                               
Sbjct: 86  LEKLRNGAREEEVAAAQARVAGARATLLDA------------------------------ 115

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                     Q+     ++L  +  +SQ DL++       +   LR    + + +     
Sbjct: 116 ----------QQTYQRNRDLVARRMISQADLDRALANRDAADANLRSAQEQLRELTNGTR 165

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E                  DL   +   A   + L    K     TI +   G ++ +  
Sbjct: 166 E-----------------EDLRMAEAELAANQASLESERKRLSDLTITATRDG-VLDSLP 207

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
           ++         P+  ++      Y R  V      H++ G   TV      D      + 
Sbjct: 208 WNLGERVTVGSPVAVLL-AGDAPYARVYVPEPYRVHIRTGSELTVHIDGLPD----PIEG 262

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +  I    +        QE    ++ + ++    +   L +G P +V      
Sbjct: 263 SVRWISQEPAFTPYYALNQEERARLMYLAEVQLPASAANLPSGVPVQVDMPTGE 316


>gi|265987245|ref|ZP_06099802.1| LOW QUALITY PROTEIN: HlyD family secretion protein [Brucella
           pinnipedialis M292/94/1]
 gi|264659442|gb|EEZ29703.1| LOW QUALITY PROTEIN: HlyD family secretion protein [Brucella
           pinnipedialis M292/94/1]
          Length = 357

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 15/210 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q D  + + +   + L L++    ++  L     +      +    L     +++    
Sbjct: 76  AQLDNLKAQLLSKDAQLTLKKLNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNA 135

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
               + ++L   +      +I SP+ GT+V   +          Q    IV  + L    
Sbjct: 136 QIRQQEAQLASDKVDLGYTSIYSPMEGTVVDEAA-KEGETLNAVQSAPTIVTVADLKVMT 194

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A+V+   I  +K G      F        K+F   + +I P  +  +N +    YY +
Sbjct: 195 VEAQVSEADISKLKPGMPVY--FTLLGQPD-KRFTGTLRQIKPTPATDNNVVL---YYAL 248

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                     +   EL     A+V F    
Sbjct: 249 F------DVPNPTGELMIDMSAQVYFVLGE 272



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 57/141 (40%), Gaps = 10/141 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE ++++ G + +    V + +  SG +K  +VE G  + QG  +   +       +++ 
Sbjct: 16  IENAITAVGTL-SALRSVNVGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIA 74

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + NL+  + ++ + L         L+K   +R++ LL   G   +T  +  N  +  
Sbjct: 75  GAQLDNLKAQLLSKDAQL--------TLKKLNAARQKSLLATRGVSQATVDQA-NADLLM 125

Query: 160 VYRSLKMKLTRMRSIYLNRLD 180
               +K    ++R        
Sbjct: 126 AEAEVKALNAQIRQQEAQLAS 146


>gi|239809489|gb|ACS26214.1| unknown [uncultured bacterium]
          Length = 263

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 60/179 (33%), Gaps = 24/179 (13%)

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR----------- 271
           V    + L E + E + +L   +E    A L + + ++++  DL   +R           
Sbjct: 85  VESLAVGLGEQVREGQTLLTIADEGRSAAVLRWQSRVRKLEADLAAARRLRASNLAAESE 144

Query: 272 ------TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
                   A   ++LT   +     T  +P  GTI      +  +  Q   PL ++V   
Sbjct: 145 VLALESELAAANAELTSARQAINYLTPEAPFDGTINRKSVDT-GDLVQVGSPLFQLV-RV 202

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                 A++  + +  V  G    V       +   +   I+  +    S +  +   +
Sbjct: 203 DRLKATAQIPQQSVGDVATGQAVRV-----DLLDGSRLSGIVTFVASAASPETRSFAVE 256



 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 18/146 (12%), Positives = 48/146 (32%), Gaps = 4/146 (2%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G++    +V  + +   G ++   V  G Q+ +G  LLT  D   +  +   +  ++ L
Sbjct: 66  QGQLEPWSSV-MLSAQVPGRVESLAVGLGEQVREGQTLLTIADEGRSAAVLRWQSRVRKL 124

Query: 107 RCHIDTEKSALD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +   +          ++   LE    +   +L       +    +    G  +    
Sbjct: 125 EADLAAARRLRASNLAAESEVLALESELAAANAELTSARQAINYLTPEAPFDGTINRKSV 184

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLR 189
               L ++ S     + ++   +  +
Sbjct: 185 DTGDLVQVGSPLFQLVRVDRLKATAQ 210


>gi|157154833|ref|YP_001464952.1| MFP family transporter [Escherichia coli E24377A]
 gi|157076863|gb|ABV16571.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E24377A]
          Length = 284

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 71/194 (36%), Gaps = 7/194 (3%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAHRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAV 211
           ++   +   E   +
Sbjct: 187 NIIQAQTRVEARLI 200



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/146 (13%), Positives = 36/146 (24%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F    E L     +            I     ++      +          ++  
Sbjct: 63  VKEGQFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLV 122

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  +A L S  K  T  ++L  + A+S   L+        +   L     +       I 
Sbjct: 123 NQRQAELDSVAKRHTRSRSLAHRGAISAQQLDDDRAAAESARAALESAKAQVSASKAAIE 182

Query: 246 ELYDEANLEFANYLKEISRDLEQNQR 271
                           +  D   + R
Sbjct: 183 AARTNIIQAQTRVEARLILDAAPDLR 208


>gi|323378477|gb|ADX50745.1| secretion protein HlyD family protein [Escherichia coli KO11]
          Length = 285

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 70/220 (31%), Gaps = 27/220 (12%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S +     +  +   +   +S    +L +     +   V+  DL            EL
Sbjct: 30  MQSPWTRDGKIRAEQVSITPQVSGRIVELNIK----DNQLVNAGDLLLTIDKTPFQIAEL 85

Query: 231 RENIHEQKNMLRHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTI 282
                +       + +  +EAN           A  L   + +++  Q +     + L  
Sbjct: 86  NAQ-AQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQ 144

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQ 338
            +    Q  I +P++G +    +    +YA   +PL  +V       I      K+    
Sbjct: 145 TQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR--- 200

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             H+++G  A +          K  +  +  I   I  Q 
Sbjct: 201 --HIREGAPAQITL----YSDNKTLRGHVSSIGRAIYDQS 234



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAIVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 156


>gi|312958240|ref|ZP_07772762.1| hypothetical protein PFWH6_0138 [Pseudomonas fluorescens WH6]
 gi|311287506|gb|EFQ66065.1| hypothetical protein PFWH6_0138 [Pseudomonas fluorescens WH6]
          Length = 439

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 4/123 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  SV +  E++       + +P  G+I +F V+    +  G  LL FE    T   D+
Sbjct: 191 PVRQSVLAPAEVVPLAG-QVVAAPLDGVIAEFLVKPNQPVKAGDLLLRFESTTLTAQADV 249

Query: 99  KKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
              ++      +             +++ D+L    E +  +          +  +    
Sbjct: 250 AARALGVAEAELKANAQRAFADAESSSRIDLLAARVEQKRAERDYARELLKRSEVRAERA 309

Query: 156 GIS 158
           GI+
Sbjct: 310 GIA 312


>gi|307635078|gb|ADI85443.2| efflux pump, RND family, membrane fusion protein [Geobacter
           sulfurreducens KN400]
          Length = 357

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/303 (9%), Positives = 77/303 (25%), Gaps = 19/303 (6%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V E  F +  + +     +      +           S+    +++      +   E
Sbjct: 62  EIPVREGDFVTVGQVVAVMDTEVLEAQLREAEAHHRQAQTSIATARSQLAQRESEKAAAE 121

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                  A L++ +K       L  K A+SQ + +        +   +     +      
Sbjct: 122 AAVRQREAELANTRKRWERSAELAAKGAMSQQETDDDYTRFQSAMAAVSSARAQVAAAGA 181

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                           +      +     T     + +  ++       + SP  G + Y
Sbjct: 182 ---------------AIATARTQVVGAASTVDAARATIERIQADIRDSALTSPRDGRVQY 226

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +             ++ +V  S   Y+   +       V  G    +            
Sbjct: 227 -KVAQPGEVVGAGGRVLSLVDLSD-VYMTFFLPTAAAGKVALGTEVRLVLDAAPRAVIPA 284

Query: 363 FKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             + +  +     +  +  + + +  + V  +I       +   ++ G P         T
Sbjct: 285 RVSFVSDVAQFTPKTVETASEREKLMFRVRAQIPVELLKKHITRVKTGLPGMAYVRLDAT 344

Query: 421 TLA 423
           T  
Sbjct: 345 TPW 347



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 55/148 (37%), Gaps = 5/148 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIE---ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           L R+  + ++ ++G+  W      +     +  +G I   +  +++ +  +G +++  V 
Sbjct: 9   LPRIAGVLVLTVLGVAAWQKFGGNDKDKGLIGGNGRIEAVE--IDVAAKTAGRVREIPVR 66

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  +  G  +   +       +   +   +  +  I T +S L    ++    E A   
Sbjct: 67  EGDFVTVGQVVAVMDTEVLEAQLREAEAHHRQAQTSIATARSQLAQRESEKAAAEAAVRQ 126

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVY 161
           RE +L +   ++  +        +S   
Sbjct: 127 REAELANTRKRWERSAELAAKGAMSQQE 154


>gi|110833997|ref|YP_692856.1| efflux transporter, membrane fusion protein [Alcanivorax
           borkumensis SK2]
 gi|110647108|emb|CAL16584.1| efflux transporter, membrane fusion protein, putative [Alcanivorax
           borkumensis SK2]
          Length = 291

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 68/217 (31%), Gaps = 22/217 (10%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLEQ 268
           + D  + +  + K+  +L       +    H     D       +  KE         E 
Sbjct: 73  RIDDTRYQAALAKARAQLLYQQKALQLAQHHYQRRKDLHRSNNNSISKEALESARIQAEL 132

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +   A   ++L       E+  I +P  GTIV        N+  Q  P++ +V      
Sbjct: 133 AKANVALAQAELDSASINLERTRIHAPADGTIVNLSL-QQGNFVNQGSPVLSLVKADS-F 190

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           Y+       ++  V  G  A+V          +  +  +  +   I+  +     Q   +
Sbjct: 191 YVTGYFEETKLPLVHVGQDASVIL----MNGSRALQGKVTSVGQAIANANTQTDRQLLPQ 246

Query: 389 VI-----LKITD-------LAFSDNNIELRNGFPAEV 413
           V      +++         LA    +I L  G  A V
Sbjct: 247 VQQTFNWVRLAQRIPVHIKLASVPKDILLAAGMTATV 283



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/172 (11%), Positives = 55/172 (31%), Gaps = 21/172 (12%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +     L  + L+ +  I G   W     +     +  V +         ++ +    SG
Sbjct: 2   QQTLRMLLTVVLVILALIAGHWVWNYYLYAPWTR-DGKVRAE--------IITLSPDVSG 52

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +++  +E+  ++ +G PL   +D            ++   R  +  ++ AL    + Y 
Sbjct: 53  WVRELNIEDNQRVSRGDPLFRIDDTRYQA-------ALAKARAQLLYQQKALQLAQHHYQ 105

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +    S    +     +     +++    ++     L      +    ++
Sbjct: 106 RRKDLHRSNNNSISKEALESARIQAELAKANVALAQAELDSASINLERTRIH 157


>gi|269968515|ref|ZP_06182522.1| putative secretion protein [Vibrio alginolyticus 40B]
 gi|269826886|gb|EEZ81213.1| putative secretion protein [Vibrio alginolyticus 40B]
          Length = 371

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 74/204 (36%), Gaps = 10/204 (4%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M  + K  H   ++ + +L I+  + +I      P+    ++ G +  +  VV++    S
Sbjct: 18  MTADQKFKHW--MRTLIVLFIVLFLYIIIADRYAPL----TTEGRV--QGYVVQVAPEVS 69

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    +EN   + +G  L T +D +    ++  ++S+++      T  S  +      
Sbjct: 70  GKVTDVLIENNQSVQKGDVLFTIDDRKYKIALEQAELSLQSAYEKEATLYSQREAALANI 129

Query: 125 DVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +  F++  RE   L  L K         +   +    S        +++ +    L 
Sbjct: 130 ARAQATFDNAHREYNRLLTLSKQKVISQSTLDNAFAQNQVSRAALKAERQNLKVIEAQLG 189

Query: 183 NKSSLLRALLSSHQKDLTMMKNLF 206
           ++     A+  +         +L 
Sbjct: 190 DQKGQSTAVRIAKNGIEKAQLDLA 213



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 65/210 (30%), Gaps = 21/210 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +   +     SL+    +  ++Y  R       +  +A   +  ++   +  L ++  
Sbjct: 95  RKYKIALEQAELSLQSAYEKEATLYSQREAALANIARAQATFDNAHREYNRLLTLSKQKV 154

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +SQ+ L+        S   L+      K +   + +   ++                   
Sbjct: 155 ISQSTLDNAFAQNQVSRAALKAERQNLKVIEAQLGDQKGQSTAVRI-------------- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  + +   +       +L+P  G +   Q       A  + PL+  VP     ++
Sbjct: 201 -----AKNGIEKAQLDLANTAVLAPSDGVVTNLQL-EVGTMANTNMPLLTFVPTGS-LWV 253

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            A    K + +V K + A V F        
Sbjct: 254 AADFREKSVANVDKTFHALVTFDANPGSVY 283


>gi|255535954|ref|YP_003096325.1| Membrane fusion efflux protein [Flavobacteriaceae bacterium
           3519-10]
 gi|255342150|gb|ACU08263.1| Membrane fusion efflux protein [Flavobacteriaceae bacterium
           3519-10]
          Length = 398

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/339 (13%), Positives = 113/339 (33%), Gaps = 30/339 (8%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  V ++G+I+  + + EIK   SGII K  V+ G Q+  G  + T   + +   ++  +
Sbjct: 52  DDKVMATGDIVPREEI-EIKPNMSGIIDKILVDEGDQVTAGQLIATLRIVPSVQNVNAAQ 110

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             I N    I   +  ++    ++ + +K +        +++     T  +        +
Sbjct: 111 QEINNANLQISNARMTVNNQQQQFAMQQKLYTQGVISKQEYI-----TAQQQLVNTQQQL 165

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             + +   T  +++ + R     + + L       + + T+++   +      + + +  
Sbjct: 166 RNAQQQLQTAQKNLQIARTGATPELAGLATTQIRSKANGTVLEVPVKVG----SQVIEAN 221

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                +T+    +I +  +++       DEA         E++  +   Q         +
Sbjct: 222 SFNAGTTI---ASIADLNSLIFQ--GTIDEAQAGKLKEGMEMNVVIGALQNKTFPGRVTM 276

Query: 281 TILEKTREQKTILSPIAGTIVYNQ-------SFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
              +   E  TI  PI G +             ++      SQ    ++   +      K
Sbjct: 277 IAPKGKDENGTIKFPIEGDVFNKTNEYIRAGFSANGEIILSSQKNALLL--DESLIQYEK 334

Query: 334 VTPKQIQHVKKGYT------ATVRFPHYADIREKKFKAI 366
           +  K    V+            V+      I  +    I
Sbjct: 335 INGKDNPFVEVKQPDGKFKKVNVKLGASDGINVQILSGI 373


>gi|86157615|ref|YP_464400.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774126|gb|ABC80963.1| secretion protein HlyD [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 323

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 55/163 (33%), Gaps = 6/163 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V  G  + +G  L+T E  E    ID  K ++   R  +   +        + 
Sbjct: 44  GRVKALAVREGDPVKEGQELVTIESQEVAAKIDQVKAAVDAARARLQIAERGA--RAEER 101

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               +A ++   QL      +    + +    I+    +      + ++        + +
Sbjct: 102 QQARRALDTARSQLEVATKAHERATALLATGTITQ--AAFDEADFKFKAARDQLAVAQAR 159

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             L+     +  +++  ++ L  +   S  ++    R   ++ 
Sbjct: 160 HDLVIKG--ARAEEVEALRALVRQGQGSLAEVESYGRETVQTA 200



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 84/298 (28%), Gaps = 29/298 (9%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR-----SI 174
           + +K     KA   RE   +    +  +  S+     I  V  ++     R++     + 
Sbjct: 38  VASKIPGRVKALAVREGDPVKEGQELVTIESQEVAAKIDQVKAAVDAARARLQIAERGAR 97

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              R          R+ L    K       L     ++Q   ++ +     +  +L    
Sbjct: 98  AEERQQARRALDTARSQLEVATKAHERATALLATGTITQAAFDEADFKFKAARDQLAVAQ 157

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                +++       EA          +   + Q Q + A+        E    +    +
Sbjct: 158 ARHDLVIKGARAEEVEA----------LRALVRQGQGSLAEV-------ESYGRETVQTA 200

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           PI G +           A    P++ +V  S    +   V    +  VK G    V  P 
Sbjct: 201 PIGGEVAKILVH-RGELAATGYPILTLVDRSDAWAVFP-VREDLLGAVKVGTELDVEVPA 258

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQE-YYEVILKITDLAFSDNNIELRNGFPA 411
                       +  + P+          ++  +++            + ELR G  A
Sbjct: 259 LRRR----LPMTVFSVAPLGDFATWRATGEKGSFDLRTFEVKARPRQPDPELRPGMTA 312


>gi|45384470|ref|NP_990306.1| chromosome-associated kinesin KIF4 [Gallus gallus]
 gi|18202611|sp|Q90640|KIF4_CHICK RecName: Full=Chromosome-associated kinesin KIF4; AltName:
           Full=Chromokinesin
 gi|603761|gb|AAC59666.1| chromokinesin [Gallus gallus]
          Length = 1225

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 75/232 (32%), Gaps = 28/232 (12%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV-LEKAFESREEQLLDFLGK 144
             E I++    ++K + ++      + E+  L     K DV   K  E R ++L +  G+
Sbjct: 555 QLEPIQSQYQTNIKDLELEVSNLQKEKEELILALSMAKKDVNQAKLSERRRKRLQELEGQ 614

Query: 145 YHSTCSKVFNYGI-----SSVYRSLKMKLTRMRSIYLNRLDLENK-SSLLRALLSSHQKD 198
            +    K+           S  R++      +R +   R+ L  +            Q+ 
Sbjct: 615 INELKKKLNEQAKLLKLKESTERTVSKLNQEIREMKNQRVQLMRQMKEDAEKFRQWKQQK 674

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +  L E++   Q +L + ER   K    LR    E     + + +   +        
Sbjct: 675 DKEVIQLKERDRKRQYELLKLERDFQKQASVLRRKTEEAAAANKRLKDALQKQREAADKR 734

Query: 259 LK---------------------EISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +                     E+    E+ +R  AD +    IL +   Q
Sbjct: 735 KESQNRGMEGVAARVKSWLANEVEVLVSTEEARRHLADLLEDRKILAQELLQ 786



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 86/260 (33%), Gaps = 38/260 (14%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI--ETTDLIDLKKVSIKNLRCHI 110
           E     ++    G I + + +   Q      LL  ++    T   ++ +   +KN R  +
Sbjct: 602 ERRRKRLQELE-GQINELKKKLNEQAK----LLKLKESTERTVSKLNQEIREMKNQRVQL 656

Query: 111 DTE--------KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN--YGISSV 160
             +        +      + +   L++    R+ +LL     +    S +       ++ 
Sbjct: 657 MRQMKEDAEKFRQWKQQKDKEVIQLKERDRKRQYELLKLERDFQKQASVLRRKTEEAAAA 716

Query: 161 YRSLKMKLTRMRSIYLNRLDLENK------------SSLLRALLSSHQKDLTMMKNLFEK 208
            + LK  L + R     R + +N+             +    +L S ++    + +L E 
Sbjct: 717 NKRLKDALQKQREAADKRKESQNRGMEGVAARVKSWLANEVEVLVSTEEARRHLADLLED 776

Query: 209 NAVSQNDLNQQERIVYKST---LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +   +L Q +           +LR   +   ++         E +L  +  ++ +  +
Sbjct: 777 RKILAQELLQLKEKKESGENPPSKLRRRTYSITDLQAS------EMDLSLSKQIESLETE 830

Query: 266 LEQNQRTFADEMSKLTILEK 285
           +E      AD   KL   + 
Sbjct: 831 MELRSAQIADLQQKLLDADN 850


>gi|94313954|ref|YP_587163.1| copper and silver tricomponent efflux membrane fusion protein CusB
           (CzcB-like) [Cupriavidus metallidurans CH34]
 gi|93357806|gb|ABF11894.1| copper and silver tricomponent efflux membrane fusion protein CusB
           (CzcB-like) [Cupriavidus metallidurans CH34]
          Length = 505

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 57/190 (30%), Gaps = 40/190 (21%)

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
           + +L  A   + +   + Q+Q        KL   +      +I SP+ G +         
Sbjct: 182 QTDLASAAKARMLQSGMTQSQADAVIRTGKLQSAQ------SIASPLDGLVTEIAVR-EG 234

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                   L ++   +++  I A+V   Q + +  G T TV      D      +  ++ 
Sbjct: 235 MTISPGMTLFRLADLTQVWVI-AEVPEAQARSIAPGQTVTVSATAAPD----PVQGKVDA 289

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF-----------------PAE 412
           I P +      +      +V + +      +    L  G                  P E
Sbjct: 290 ILPDVDPATRTI------KVRIVLP-----NKQRRLVPGMFASVRFENGDRQDVLQIPTE 338

Query: 413 VLFTAKNTTL 422
            +      +L
Sbjct: 339 AVIRTGQRSL 348


>gi|319899997|ref|YP_004159725.1| secretion protein HlyD family protein [Bacteroides helcogenes P
           36-108]
 gi|319415028|gb|ADV42139.1| secretion protein HlyD family protein [Bacteroides helcogenes P
           36-108]
          Length = 328

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 96/274 (35%), Gaps = 12/274 (4%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEIS-VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            +  L++ G+I ++       +        G+    +    + S   G I +F+V+ G  
Sbjct: 11  LLAFLTLTGVIAVVAIVGFFMLRKGPEIVQGQAEVTEYR--VSSKVPGRILEFRVKEGQS 68

Query: 78  ILQGTPLLTFE--DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           +  G  L   E  D++          +    +     + +  + +   Y++ +KA     
Sbjct: 69  VQAGDTLAILEAPDVQAKLEQARAAEAAAKAQNEKALKGARHEQIQAAYEMWQKA----- 123

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +  LD   K +     +++ G+ S  + L     +  +        + +  + R      
Sbjct: 124 QAGLDIAEKSYKRVKNLYDQGVMSAQK-LDEVTAQRNAAKATENAAKAQYDMARNGAERE 182

Query: 196 QKDLTMMKNLFEKNAVSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            K          K AVS+ +   ++  ++ ++  E+ E   +   ++     + + A L+
Sbjct: 183 DKAAAAALVERAKGAVSEVESYIKETYLIAQTAGEVSEIFPKVGELVGTGAPIMNIAILD 242

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                  +  DL Q      +  + +  LEK+  
Sbjct: 243 DMWVTFNVREDLLQGLGMNTEFDAYIPALEKSIR 276



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 63/227 (27%), Gaps = 25/227 (11%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +   R         L+F   +   ++        +  D   K     +        +
Sbjct: 42  QAEVTEYRVSSKVPGRILEFRVKEGQSVQAGDTLAILEAPDVQAKLEQARAAEAAAKAQN 101

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
                  +  ++++ Y             +A L   +K    +KNL+++  +S   L+  
Sbjct: 102 EKALKGARHEQIQAAY-------EMWQKAQAGLDIAEKSYKRVKNLYDQGVMSAQKLD-- 152

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                    E+    +  K         YD A        K  +  L +  +    E+  
Sbjct: 153 ---------EVTAQRNAAKATENAAKAQYDMARNGAEREDKAAAAALVERAKGAVSEV-- 201

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
               E   ++  +++  AG +                P+M I     
Sbjct: 202 ----ESYIKETYLIAQTAGEVSEI-FPKVGELVGTGAPIMNIAILDD 243


>gi|262275939|ref|ZP_06053748.1| probable Co/Zn/Cd efflux system membrane fusion protein [Grimontia
           hollisae CIP 101886]
 gi|262219747|gb|EEY71063.1| probable Co/Zn/Cd efflux system membrane fusion protein [Grimontia
           hollisae CIP 101886]
          Length = 362

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 45/127 (35%), Gaps = 12/127 (9%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G ++ +G  L   +  +    +   ++ +KN     +  K+        
Sbjct: 74  GGRLTDILVKEGDEVKKGQLLARLDARDAKTALASAELELKNTTLEYERAKA-------- 125

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM--RSIYLNRLDL 181
             + +K+    +  L     +++   ++V        Y  L      +  R +  N + +
Sbjct: 126 --IFKKSQAISKADLDAITTQFNLARNRVDEARRQLEYTELHAPFDGIIGRKLVDNHIQV 183

Query: 182 ENKSSLL 188
           +   S+L
Sbjct: 184 QANESVL 190


>gi|239995112|ref|ZP_04715636.1| HlyD family secretion protein [Alteromonas macleodii ATCC 27126]
          Length = 377

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 50/174 (28%), Gaps = 10/174 (5%)

Query: 39  PIEISVSSSGEILNEDNVVEI---------KSPFSGIIKKFQVENGSQILQGTPLLTFED 89
           P+E     +G+I +  +   I          +  SGII++  VE G  + +G  L   + 
Sbjct: 66  PVETQTIVTGDITSTYDTTAILEAREEAFVVARASGIIEEIFVEEGDYVEKGQVLAQLDK 125

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                 +      +  +   ++             D  +K     E              
Sbjct: 126 RRYELNLSKALADLAGIESELEKVNKVYSKKLISDDTYDKLTSQFESAKASVRLAELDLK 185

Query: 150 SKVFNYGISSVYRSLKMKLTRM-RSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                  I         K+  +  S    R+    +   L+ ++   + +L  +
Sbjct: 186 EATITAPIDGYIAERNAKVGNLTESFQRERMFHIVQQRNLQGIVYLPENELPNV 239



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 88/230 (38%), Gaps = 24/230 (10%)

Query: 190 ALLSSHQKDLTMMKN--LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           A+L + ++   + +   + E+  V + D  ++ +++ +  L+ R         L  +  +
Sbjct: 85  AILEAREEAFVVARASGIIEEIFVEEGDYVEKGQVLAQ--LDKRRYELNLSKALADLAGI 142

Query: 248 YDEANLEFANYLKEISRD--LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
             E       Y K++  D   ++    F    + + + E   ++ TI +PI G I   ++
Sbjct: 143 ESELEKVNKVYSKKLISDDTYDKLTSQFESAKASVRLAELDLKEATITAPIDGYIAE-RN 201

Query: 306 FSSSNYAQQ--SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
               N  +    + +  IV   +       +   ++ +V  G  A +      D      
Sbjct: 202 AKVGNLTESFQRERMFHIV-QQRNLQGIVYLPENELPNVVIGQGAMLTVAALGDR---SI 257

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            A +E+I P+I            ++V LK+      + + +L+ G   +V
Sbjct: 258 TASVERISPVIDATTGT------FKVTLKVP-----NEDNKLKAGMFTDV 296


>gi|256080733|ref|XP_002576632.1| hypothetical protein [Schistosoma mansoni]
 gi|238661908|emb|CAZ32869.1| expressed protein [Schistosoma mansoni]
          Length = 2638

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 93/246 (37%), Gaps = 33/246 (13%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
                 +     ++  E     + ++  +  +   +  ++  +S    L N+   LE A  
Sbjct: 1723 REYDNVKSQLDMIRSEKSLADENLEQLRTKLSKTKLQVERLESNKSNLENQLTQLEDAVN 1782

Query: 133  SRE---EQLLDFLGKYHSTCSK-------------------VFNYGISSVYRSLKMKLTR 170
            +++    QLL  L +  +  ++                   + +  +S+  ++   +L R
Sbjct: 1783 TKKLEYNQLLPNLSELETRLTRTQHDIEVGAERIRSDQHLRLEDERLSATRQAELTRLAR 1842

Query: 171  MRSIYLNRLDL-----ENKSSLLRALLSSHQKDLT----MMKNLFEKNAVSQNDLNQQER 221
                   RL+L     E K S L  + +   ++L     +++ L  + A+ Q +LN+ + 
Sbjct: 1843 QIEEDKLRLELLAQDTEAKKSELELIKAEKHRELENSNSILRELANQTAIKQRELNETQA 1902

Query: 222  IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             +  S  E    +   K +    + +  E   E  +  +     L   Q+   + +++++
Sbjct: 1903 SLNASLDEKERILQSVKTLRLERDNIRTELEQEQKSVAE--LTALVTRQKREFEHLTEMS 1960

Query: 282  ILEKTR 287
             LE++R
Sbjct: 1961 HLEESR 1966



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 77/234 (32%), Gaps = 10/234 (4%)

Query: 65   GIIKKFQVENGSQILQGTPLLTFED--IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            GI+        +   +   L T +    ++   + + K   K      +  K   D + +
Sbjct: 1671 GIVTDLANLEATVSQRRAELSTLDTNIQDSDQQLSIIKAQAKEAVSKYEEAKREYDNVKS 1730

Query: 123  KYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLD 180
            + D++       +E L     K   T  +V       S++   L      + +  L    
Sbjct: 1731 QLDMIRSEKSLADENLEQLRTKLSKTKLQVERLESNKSNLENQLTQLEDAVNTKKLEYNQ 1790

Query: 181  LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQ 237
            L    S L   L+  Q D+ +     E+    Q+   + ER+      E   L   I E 
Sbjct: 1791 LLPNLSELETRLTRTQHDIEVG---AERIRSDQHLRLEDERLSATRQAELTRLARQIEED 1847

Query: 238  KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            K  L  + +  +    E      E  R+LE +     +  ++  I ++   +  
Sbjct: 1848 KLRLELLAQDTEAKKSELELIKAEKHRELENSNSILRELANQTAIKQRELNETQ 1901


>gi|144898480|emb|CAM75344.1| peptidase family M50 [Magnetospirillum gryphiswaldense MSR-1]
          Length = 699

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 30/78 (38%)

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           PF  ++++  V++G ++  G  L   ++ +           +  LR  +       DF  
Sbjct: 455 PFGAVLREVTVKDGDRVEAGAVLARLDNPDAEHRRQQLDSRVAALRYELSATGMDSDFRA 514

Query: 122 NKYDVLEKAFESREEQLL 139
               + E+   ++ E+  
Sbjct: 515 RSQSIAEELRTAQAERAA 532



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 46/160 (28%), Gaps = 12/160 (7%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E +              L       +     +          ++   L   +++  +L+
Sbjct: 485 AEHRRQQLDSRVAALRYELSATGMDSDFRARSQSIAEELRTAQAERAALANEQDRLELLA 544

Query: 295 PIAGTIVYNQ-SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           P+ G +  +        +  Q +PL+ +    +   + A V  + +  ++ G        
Sbjct: 545 PMDGIVTDSSPLVQPGQWINQREPLLGL---RQGGVLEAYVAEEDVPRLRVGA------S 595

Query: 354 HY--ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            Y   + R+    A I  ID +             Y   +
Sbjct: 596 AYFIPEGRDAGIDATITAIDRVAVTALTEPSLAVPYGGTI 635


>gi|15890324|ref|NP_355996.1| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
 gi|15158529|gb|AAK88781.1| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
          Length = 354

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 49/151 (32%), Gaps = 6/151 (3%)

Query: 17  LKRMTLLSIIGIIGLITWSILL--PIEISVSSSGEILNEDNVVEIK----SPFSGIIKKF 70
           + +  LL  + ++ L   +      +      SG + +   +  ++    +  +G ++  
Sbjct: 1   MSKKGLLIGLAVVVLAIAAYFAWSKLTAEGLPSGFVASNGRIEAVEIDISTKTAGRLQDI 60

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G  +  G  L   +  +        +  ++  +  IDT  S +     +       
Sbjct: 61  MVREGDFVKAGQVLAQMDTAQLEAKKRQAEAQLRRAKIAIDTAHSLVAQREAEKTSALAV 120

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            E R+ QL      Y  +   +    +S   
Sbjct: 121 VEQRKAQLDSASKTYARSRQLLTGNAVSQQI 151


>gi|2351219|dbj|BAA22067.1| myosin heavy chain [Cyprinus carpio]
          Length = 1933

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 82/214 (38%), Gaps = 12/214 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ----LLDFLG 143
            +  E+ + ++ K  S++  +  + +E   L     + + L    + ++      L D+  
Sbjct: 1398 DAEESIEAVNSKCASLEKTKQRLQSEVEDLMIDGERANALAANLDKKQRNFDKVLADWKQ 1457

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY  + +++      +  RSL  +L +M++ Y   LD       L+    + Q++++ + 
Sbjct: 1458 KYEESQAELEAAQKEA--RSLSTELFKMKNSYEEALD---HLETLKRENKNLQQEISDLS 1512

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                +   S +++ + ++ V     E++  + E +  L H         LE      EI 
Sbjct: 1513 EQLGETGKSIHEIEKAKKTVESEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKSEID 1572

Query: 264  RDLEQNQRTFADEM---SKLTILEKTREQKTILS 294
            R L +             ++    ++     + S
Sbjct: 1573 RKLAEKDEEMEQIKRNSQRVLDSMQSTLDSEVRS 1606



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 85/229 (37%), Gaps = 24/229 (10%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREE--QL 138
            L  +  ++   +  +  +++ ++  ++ EKS     +D L++  + + KA  + E+  + 
Sbjct: 1191 LRKKQADSVAELGEQIDNLQRIKQKLEKEKSEYKMEIDDLSSNMEAVAKAKGNLEKMCRT 1250

Query: 139  LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            L+         S   +  ++ +        T          + E   S L     +  + 
Sbjct: 1251 LEDQLSEIKAKSDENSRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQ 1310

Query: 199  LTMMKNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +K   E+   ++N L               +Q     ++  EL+  + +  + +   
Sbjct: 1311 IEDLKRHVEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRGMSKANSEVAQW 1370

Query: 245  NELYD----EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               Y+    +   E     K++++ L+  + +     SK   LEKT+++
Sbjct: 1371 RAKYETDAIQRTEELEESKKKLAQRLQDAEESIEAVNSKCASLEKTKQR 1419



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 67/227 (29%), Gaps = 22/227 (9%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  +       ++      +     ++ EK   D    K D     F S+ E       +
Sbjct: 1043 LRMDLERVKRKLEGDLKLAQESIMDLENEKQQSDEKIKKKDFEISQFLSKIEDEQSLGAQ 1102

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH--------- 195
                  ++              +  R + +   R DL  +   +   L            
Sbjct: 1103 LQKKIKELQARIEELEEEIEAERSARAK-VEKQRADLSRELEEISERLEEAGGATAAQIE 1161

Query: 196  ------QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                   +   M ++L E     +       +    S  EL E I   + + + + +   
Sbjct: 1162 MNKKREAEFQKMRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRIKQKLEKEKS 1221

Query: 250  EANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            E  +E  +       + +   +LE+  RT  D++S++        ++
Sbjct: 1222 EYKMEIDDLSSNMEAVAKAKGNLEKMCRTLEDQLSEIKAKSDENSRQ 1268



 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 78/216 (36%), Gaps = 22/216 (10%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + ++G   +  +         L +  I+ LR  ++                E+  +  E
Sbjct: 1657 DEAVRGQEDMKEQVAMVERRNSLMQAEIEELRAALEQ--------------TERGRKVAE 1702

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            ++L+D      S    + +   +S+  S K   T +  +     D   ++          
Sbjct: 1703 QELVDA-----SERVGLLHSQNTSLINSKKKLETDLVQVQGEVDDAVQEARNAEEKAKKA 1757

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              D  MM    +K   +   L + ++ +  +  +L+  + E +++     +   +   + 
Sbjct: 1758 ITDAAMMAEELKKEQDTSAHLERMKKNMELTVKDLQHRLDEAESLAMKGGKKQLQ---KL 1814

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             + + E+  ++E  QR  AD +  +   E+  ++ T
Sbjct: 1815 ESRVHELEAEVEAEQRRGADAVKGVRKYERRVKELT 1850


>gi|94310625|ref|YP_583835.1| secretion protein HlyD [Cupriavidus metallidurans CH34]
 gi|93354477|gb|ABF08566.1| putative HlyD family secretion protein [Cupriavidus metallidurans
           CH34]
          Length = 355

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/407 (11%), Positives = 101/407 (24%), Gaps = 89/407 (21%)

Query: 21  TLLSIIGIIGLITWSILLPI------EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            L+ +  + G   W     +      E     +G I   +  V++ +  +G +    V  
Sbjct: 11  ALVVLAAVAG--GWYAWDRLRDNGPGEGFARGNGRIEATE--VDVATKLAGRVSDILVFE 66

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G PL   +        D      +          +      +     E     R
Sbjct: 67  GDFVTAGQPLARMQITTLEAQHDEAVAQHQQAINAAAAAVAQAAARKSDKATSEALVGQR 126

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E +L   L +     S+  +   +S  + L     R RS          + +  ++ + +
Sbjct: 127 EAELDAALRRR--ARSETLSKEGASSIQELDDDRARERSAQAAVTAARAQVAAAQSAIEA 184

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q  +                               +  +   +  +  I    D++ L+
Sbjct: 185 AQAQVVG----------------------------AQSTVAATQATIARIRADIDDSELK 216

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                                                  +P  G I Y +          
Sbjct: 217 ---------------------------------------APRDGRIQY-RVAQPGEVLGA 236

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
              ++ +V  S   Y+   +   Q   +  G  A +         E    A I  +    
Sbjct: 237 GGKVLNLVDLSD-VYMTFFLPEAQAGRLAIGQDARIILDA---APEYVIPAKISFVSSTA 292

Query: 375 SQQDNNLQTQE-----YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 ++T+       + V  KI       +   ++ G P      
Sbjct: 293 QFTPKTVETESERQKLMFRVRAKIDPDLLRKHLKVVKTGLPGVAWVK 339


>gi|320179258|gb|EFW54216.1| Putative membrane protein [Shigella boydii ATCC 9905]
          Length = 355

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 73/199 (36%), Gaps = 7/199 (3%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAIVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDL 216
           ++   +   E    ++  +
Sbjct: 187 NIIQAQTRVEAAQTTERRI 205


>gi|306842454|ref|ZP_07475105.1| efflux transporter, RND family, MFP subunit [Brucella sp. BO2]
 gi|306287310|gb|EFM58790.1| efflux transporter, RND family, MFP subunit [Brucella sp. BO2]
          Length = 383

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 59/206 (28%), Gaps = 27/206 (13%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN----------- 269
           R+    T++  + I E       I     E  L+ A   ++    L              
Sbjct: 101 RVRAGDTVKEGDLIAELDAETEQIAVAKAETALKDAQTTRQRIARLRATNTATEVQAVGA 160

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   A+    L   +    ++ + +PI G +      +  NY      + +I        
Sbjct: 161 ELAVANAQLALQDAQLALSRRMVRAPINGIVGILPVNA-GNYVTAQTSIARI-DDRSTVL 218

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I   V  +    +K G   T     +        K  I  +D ++ +    L       V
Sbjct: 219 IDIWVPERFAPQIKVGQPLTAESTAFPGEIY---KGRINAVDNMLDEASRTLH------V 269

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
             ++ +         LR G    V  
Sbjct: 270 RAEVPNAED-----RLRAGMSFSVTI 290



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 34/105 (32%), Gaps = 3/105 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKS 115
           +    SG + K +V  G  + +G  +   +       +   + ++K+    R  I   ++
Sbjct: 89  VTPYSSGYMTKLRVRAGDTVKEGDLIAELDAETEQIAVAKAETALKDAQTTRQRIARLRA 148

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                  +    E A  + +  L D          +    GI  +
Sbjct: 149 TNTATEVQAVGAELAVANAQLALQDAQLALSRRMVRAPINGIVGI 193


>gi|294775261|ref|ZP_06740784.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
           PC510]
 gi|294450838|gb|EFG19315.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
           PC510]
          Length = 367

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 71/191 (37%), Gaps = 15/191 (7%)

Query: 55  NVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +V  I+         G +++  V+ G ++ +G PL      + ++ +   + + K  +  
Sbjct: 38  DVQAIQFVEIKPKVEGFVQQIYVDEGQKVKKGQPLFQLSSDQYSETVKEAQANYKQAQAQ 97

Query: 110 IDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            +    E   +  L +K  + +   +   ++      K     +++    +   Y ++  
Sbjct: 98  YEMANYEAERIGRLVDKQILSKIRLDQANKEKEVAQMKVEQAKAQMQRSQMDYSYTTITA 157

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                   Y++R+  +  S +    L +   D++    +F    V++++  + +R     
Sbjct: 158 PFDG----YIDRIPYKTGSLVNPQSLLTTVSDIS---EIFAYYKVNESEYLEYKRQQLSG 210

Query: 227 TLELRENIHEQ 237
             +  EN  E 
Sbjct: 211 QKQHEENNVEL 221



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 41/134 (30%), Gaps = 21/134 (15%)

Query: 208 KNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +  V Q  +++ +++     L +L  + + +       N    +A  E ANY  E    L
Sbjct: 52  EGFVQQIYVDEGQKVKKGQPLFQLSSDQYSETVKEAQANYKQAQAQYEMANYEAERIGRL 111

Query: 267 EQ------------------NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                                Q       +++   +      TI +P  G I      + 
Sbjct: 112 VDKQILSKIRLDQANKEKEVAQMKVEQAKAQMQRSQMDYSYTTITAPFDGYIDRIPYKT- 170

Query: 309 SNYAQQSQPLMKIV 322
            +     Q L+  V
Sbjct: 171 GSLVNP-QSLLTTV 183


>gi|269962878|ref|ZP_06177218.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832432|gb|EEZ86551.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 331

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 71/193 (36%), Gaps = 15/193 (7%)

Query: 14  PASLKRMTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           P +   +T  S+IG+  ++ W     ++  P+                  I S   G++ 
Sbjct: 23  PKTKWTLTTASVIGMF-IVGWIFLYMAMYQPVSRMARLYSVTTP------ITSQVEGMVT 75

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---LNNKYD 125
           +  V+   Q+  G PL   +D    D ++  +  IK     ID  +S L     L +K  
Sbjct: 76  QVYVQGNQQVKAGDPLYQIDDTPFKDKVNRIQGDIKRTESAIDFYQSELARYKKLRSKGY 135

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             ++  ++ E QLL+         S++     +    ++        +    R  ++++ 
Sbjct: 136 SSQEKIDNIENQLLEQKANQSKYQSELEVAQFNLSKTTVTAPTDGYVTQVALRPGMKSRI 195

Query: 186 SLLRALLSSHQKD 198
              +  L+   K+
Sbjct: 196 VPFQGNLTFVHKE 208



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 94/268 (35%), Gaps = 37/268 (13%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSS-LLRALLSSHQKDLTMMKNLFEKNAVS-QNDLN 217
           +Y ++   ++RM  +Y     + ++   ++  +     + +     L++ +    ++ +N
Sbjct: 45  LYMAMYQPVSRMARLYSVTTPITSQVEGMVTQVYVQGNQQVKAGDPLYQIDDTPFKDKVN 104

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + +  + ++   +     E     + +      +  +  N    I   L + +   +   
Sbjct: 105 RIQGDIKRTESAIDFYQSELAR-YKKLRSKGYSSQEKIDN----IENQLLEQKANQSKYQ 159

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--IVP----------HS 325
           S+L + +    + T+ +P  G +            +     MK  IVP            
Sbjct: 160 SELEVAQFNLSKTTVTAPTDGYVTQVA-------LRPG---MKSRIVPFQGNLTFVHKED 209

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           K  +   K  P   ++VK GY A V    +  I    +KA + +++ I +Q   +     
Sbjct: 210 KQLFAAFKQAPA--RYVKVGYPAEV---TFNTIPGHAYKAHVTQVNDIFAQGAVSPSGNM 264

Query: 386 YYEVILKITD---LAFSDNNIELRNGFP 410
            Y   +       +    +N +L    P
Sbjct: 265 KYPEQIPAGGRILVKVELDNPDLVKDMP 292


>gi|258648393|ref|ZP_05735862.1| multidrug resistance protein, AcrA/AcrE family [Prevotella tannerae
           ATCC 51259]
 gi|260851563|gb|EEX71432.1| multidrug resistance protein, AcrA/AcrE family [Prevotella tannerae
           ATCC 51259]
          Length = 392

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 3/102 (2%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           VEI+   SG + K  V+ G  + +G  L + +D +    +   +  IK     I T+K  
Sbjct: 58  VEIRPKISGFVTKVFVKEGQCVKKGQVLFSIDDAQFRAAVLSARAQIKVCNATIATQKLT 117

Query: 117 LD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++    L +K  + +   +  E  L     +  +  S++   
Sbjct: 118 VENKRLLYSKNIISDYDMKMAENTLQSTQAQLLAARSQLRAA 159



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 24/100 (24%), Gaps = 10/100 (10%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD---------LEQNQRTFA 274
            +    +     + K     I         +   Y K I  D         L+  Q    
Sbjct: 91  AQFRAAVLSARAQIKVCNATIATQKLTVENKRLLYSKNIISDYDMKMAENTLQSTQAQLL 150

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              S+L          TI SP  G I     F +      
Sbjct: 151 AARSQLRAALDNLRWCTITSPADGVI-GMLPFKTGALVSP 189


>gi|218960936|ref|YP_001740711.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729593|emb|CAO80505.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 409

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/202 (10%), Positives = 58/202 (28%), Gaps = 21/202 (10%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
              E+      +    + I       + E  +   +  ++ E      + +   +  L+ 
Sbjct: 135 QKAEMNLKNARKDLADKTILLQKQFISQEEYDKASDALKEAEIEYTQASSQYEMIRDLDV 194

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQ-------SQPLMKIVPHSKLTYIRAKVTPKQ 338
             +   + +  +G ++           Q           +MKI        +++ +    
Sbjct: 195 PGKVTHVYATASGVVIERNIN-EGEMVQSSLTSFGEGTVIMKIA-DLNKMIVKSNINEVD 252

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I   K   +A +        +       + KI P    ++N           +   ++  
Sbjct: 253 ISKFKLNQSAEITLDALPYEQY---NGKVVKIAPQAIIENN---------AKVFPIEINL 300

Query: 399 SDNNIELRNGFPAEVLFTAKNT 420
           + +   ++ G  A V   A + 
Sbjct: 301 NASGKVVKPGMTANVTILADSR 322


>gi|152983747|ref|YP_001351291.1| hypothetical protein PSPA7_5975 [Pseudomonas aeruginosa PA7]
 gi|150958905|gb|ABR80930.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 382

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 76/215 (35%), Gaps = 7/215 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPF 63
           + +K+     L R+ + + +  +GL+ W +  P    +   S +G I   +  V++ +  
Sbjct: 24  EGMKQESKRWLSRVLVAAALVGVGLLVWQVSRPTGLGDGFASGNGRIEATE--VDVAAKL 81

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G + + +V+ G  +  G  +   +       +   +  ++       T  S +    ++
Sbjct: 82  PGRVAEIEVDEGDFVTAGDVVARMDTQVLEAQLAQAQAQVRQAENAKVTATSLVAQRESE 141

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +     R+ +L     ++  T + V    +    + L      ++S         +
Sbjct: 142 KGTAQAVVAQRQAELTAAQKRFTRTEALVRRNALPQ--QQLDDDRATLQSAQAALSAARS 199

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +    +A + + +  +   ++  E    S   L  
Sbjct: 200 QVISAQAAIEAGRSQVIEAQSAIEAARASVARLQA 234


>gi|37525537|ref|NP_928881.1| macrolide transporter subunit MacA [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784965|emb|CAE13883.1| Macrolide-specific efflux protein MacA precursor [Photorhabdus
           luminescens subsp. laumondii TTO1]
          Length = 370

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 78/219 (35%), Gaps = 24/219 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQN 269
           +QN + + E  + +   +L E   + K     +    + A ++      L ++  D+E  
Sbjct: 97  AQNQVKEVEATIKELNADLIEAKAQLKLAQLTLKRQNNLAKVQAVSLQELDQVKTDVEVK 156

Query: 270 QRTFADEMSK-------LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMK 320
           +    + +++       L   +   +   I +P+ G +V  ++          +   ++ 
Sbjct: 157 RAKIENLLAQISKNQASLDTAQTNLQYTRITAPMDGIVVNIKTLQGQTVIAAQEAPTILT 216

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +        ++A+V+   + ++K G  A+  F        K F  +++     I      
Sbjct: 217 LA-DLGTMLVKAEVSEADVIYLKPGQKAS--FTVLGAPD-KNFPGVLK----DILPTPEK 268

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +    ++    ++   A     + L+    A+V     +
Sbjct: 269 INDAIFFYARFEV---ANPQQLLRLQ--MTAQVKIQLDS 302



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 65/177 (36%), Gaps = 8/177 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V ++G++     V ++ +  SG ++   VE G ++++G  L   +     + +   
Sbjct: 46  LEKNVLATGKLDAVRKV-DVGAQVSGQLQNLHVEVGDKVVEGQLLALIDPKPAQNQVKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLN---NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN-- 154
           + +IK L   +   K+ L        + + L K      ++L           +K+ N  
Sbjct: 105 EATIKELNADLIEAKAQLKLAQLTLKRQNNLAKVQAVSLQELDQVKTDVEVKRAKIENLL 164

Query: 155 YGISSVYRSLKMKLTRMR--SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             IS    SL    T ++   I      +      L+       ++   +  L +  
Sbjct: 165 AQISKNQASLDTAQTNLQYTRITAPMDGIVVNIKTLQGQTVIAAQEAPTILTLADLG 221


>gi|310830142|ref|YP_003965242.1| Secretion protein HlyD family protein precursor [Ketogulonicigenium
           vulgare Y25]
 gi|308753048|gb|ADO44191.1| Secretion protein HlyD family protein precursor [Ketogulonicigenium
           vulgare Y25]
          Length = 332

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/277 (11%), Positives = 74/277 (26%), Gaps = 28/277 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +   ++    +       +     N    E       A L + Q  +   ++  ++ +
Sbjct: 71  RTYRERLAQAEATRAGADAALSVAQQNVRSAEATLHAKEAALVAAQIAVDTAQSARDRTS 130

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +      +  + ++ L L+  + +       +    ++     A         +   +
Sbjct: 131 ELRTRGVATDASIEQADLSLQNAVAQYSQAEATVAVQREQLAGAIA--------QISTAE 182

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP-HSKLTY 329
              A  ++ + + +   E   I +P  G  +   S     Y      L   VP   K  +
Sbjct: 183 ANIASAVAAVALAQLDLEHTVIRAPADGY-LGQVSARVGQYVSAGTAL---VPHVGKDLW 238

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQE 385
           + A      +  +  G   T             F   +E   P  + +         T  
Sbjct: 239 VIANFNEGNLSAIHLGQHVTFSVDAMGGQN---FAGTVESFSPAAASEFSLMQGTNATGN 295

Query: 386 YYE------VILKITDLAFSDNNIELRNGFPAEVLFT 416
           + +      V + I        N  L  G        
Sbjct: 296 FTKIPQRVPVRITIDPDQAGTQN--LVPGLSVNAKIQ 330


>gi|307824775|ref|ZP_07654998.1| HlyD family secretion protein [Methylobacter tundripaludum SV96]
 gi|307734133|gb|EFO04987.1| HlyD family secretion protein [Methylobacter tundripaludum SV96]
          Length = 240

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 81/229 (35%), Gaps = 29/229 (12%)

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS-------TLELRENIHEQKNM 240
           LRA L + Q  +   +       +SQ  L+  ER            TLE  +    Q  +
Sbjct: 24  LRAQLKARQSTMIASEISAR---ISQLKLHDGERFSAGQVLIGFHCTLEEAQLSKAQATL 80

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
            + I     E N +        + +L  ++    +  + L I +   ++  I +P +G +
Sbjct: 81  GKKIRTY--EVNQQLETRRSIGALELAVSKAESEEAKADLRIAQAMVDRCVIHAPFSGKV 138

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
               +    +  +   PL++I+   K   +    + + + ++  G    V     A   +
Sbjct: 139 SEVIARPYQSV-RPGDPLLEIL-DDKDLEVEFMASSRSMPNLAPGKRFRVTLDEVAKSYQ 196

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            +   I  K+DP+        QT + Y  I+   D        EL  G 
Sbjct: 197 AEITRIGGKVDPVS-------QTVKVYGRIIDKAD--------ELLPGM 230


>gi|260753900|ref|YP_003226793.1| efflux transporter RND family, MFP subunit [Zymomonas mobilis
           subsp. mobilis NCIMB 11163]
 gi|258553263|gb|ACV76209.1| efflux transporter, RND family, MFP subunit [Zymomonas mobilis
           subsp. mobilis NCIMB 11163]
          Length = 440

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 51/143 (35%), Gaps = 3/143 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S    + I V + G +     +  +K   SG IK+     G  + +G PL   +    + 
Sbjct: 95  SKTADVPIVVEALGTVTPVSTI-TVKPQVSGYIKRILYTEGQMVKEGQPLALIDPRLYSA 153

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +   + +++     ++  +  L  D       + ++  +++   +    G   +    V
Sbjct: 154 QLVQNEGALRRDIAQLENARIQLARDRQLGSDSIAKQDVDTQAATVHQLEGTVEADRGAV 213

Query: 153 FNYGISSVYRSLKMKLTRMRSIY 175
               ++  Y ++   +T    + 
Sbjct: 214 EYSKVNLGYTTIPSPVTGRVGLR 236


>gi|254496670|ref|ZP_05109533.1| AcrA, membrane-fusion protein [Legionella drancourtii LLAP12]
 gi|254354098|gb|EET12770.1| AcrA, membrane-fusion protein [Legionella drancourtii LLAP12]
          Length = 364

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/329 (13%), Positives = 104/329 (31%), Gaps = 47/329 (14%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E+    DL + +++    H       L F      + E    S  E +++ +  ++    
Sbjct: 8   ESQKAQDLHRFAVEAQVAH-----KNLHFTGTIQPLHESTLTSPMEAVVETMNFHYGQLV 62

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K     ++     L+ +     + YL   D            +  +      + L+    
Sbjct: 63  KAGEVILTLNSNELQKQFNDTLTEYLKAKD----------SYTVAKAKFAGTQELWNSGL 112

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +++N+   ++  +      +R  + +    L  + E  DE N +  + L           
Sbjct: 113 LAKNNYLSEKSNMDT----VRVTLMQSTRKLSEMLEKVDEKNAKKMSTLS---------- 158

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVY--------NQSFSSSNYAQQSQPLMKIV 322
              AD     TIL        + +P AG ++Y        +   +  +  +  Q +  I 
Sbjct: 159 --LADFDKVRTILAAKHNLIQLKAPRAGILLYPPKAGEDKSARITVGSSVKSGQVIALIG 216

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  I  +V    I  +  G  AT+    +        +  +  ++    Q  +   
Sbjct: 217 -DLSGISIEIEVPEIDISQIHSGMQATISGIAFGKH---PLQGKLVAVNA---QASSTSN 269

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPA 411
              ++  ++++  L        ++ G  A
Sbjct: 270 GLPFFTAVVEVKSLTPEQQQW-IKVGMSA 297


>gi|241761535|ref|ZP_04759622.1| efflux transporter, RND family, MFP subunit [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
 gi|283856494|ref|YP_163264.2| RND family efflux transporter subunit MFP [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241373843|gb|EER63376.1| efflux transporter, RND family, MFP subunit [Zymomonas mobilis
           subsp. mobilis ATCC 10988]
 gi|283775498|gb|AAV90153.2| efflux transporter, RND family, MFP subunit [Zymomonas mobilis
           subsp. mobilis ZM4]
          Length = 440

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 51/143 (35%), Gaps = 3/143 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S    + I V + G +     +  +K   SG IK+     G  + +G PL   +    + 
Sbjct: 95  SKTADVPIVVEALGTVTPVSTI-TVKPQVSGYIKRILYTEGQMVKEGQPLALIDPRLYSA 153

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +   + +++     ++  +  L  D       + ++  +++   +    G   +    V
Sbjct: 154 QLVQNEGALRRDIAQLENARIQLARDRQLGSDSIAKQDVDTQAATVHQLEGTVEADRGAV 213

Query: 153 FNYGISSVYRSLKMKLTRMRSIY 175
               ++  Y ++   +T    + 
Sbjct: 214 EYSKVNLGYTTIPSPVTGRVGLR 236


>gi|91071488|gb|ABE06369.1| macrolide-specific efflux protein MacA precursor [Escherichia coli
           UTI89]
          Length = 380

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 120 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRN 179

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 180 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 238

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 239 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKINDAIFYYARFEVP 291

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 292 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 330



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 52/138 (37%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 55  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 113

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 114 EAMLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNA--ATEMAVKQAQIGT 171

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 172 IDAQIKRNQASLDTAKTN 189


>gi|319954727|ref|YP_004165994.1| efflux transporter, rnd family, mfp subunit [Cellulophaga algicola
           DSM 14237]
 gi|319423387|gb|ADV50496.1| efflux transporter, RND family, MFP subunit [Cellulophaga algicola
           DSM 14237]
          Length = 352

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 62/202 (30%), Gaps = 21/202 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V   D  ++  I+        +  +E      ++ +                   + + +
Sbjct: 76  VDLGDYVKKGTIIASIDPSTYKEQYEASKAQANLAKENYTRINNVFEKGSIAEIRMIEAR 135

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            ++    +     ++   + TI +P  G +   +   S   A    P+++++    +  +
Sbjct: 136 SSYKQAQAAANAAQQNLNKTTISAPFDGYV-GKKLTESGAVASPGMPVIELI---AILKV 191

Query: 331 RAKVTPKQ--IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            A V+     I   K G +A V          K F   + +I         +      YE
Sbjct: 192 HAIVSLSDQEINTYKTGSSALVYIAALN----KTFPGKLTEI------AVQSGNQNPVYE 241

Query: 389 VILKITDLAFSDNNIELRNGFP 410
             + I + A       L+ G  
Sbjct: 242 AKITIDNTANL-----LKPGMT 258


>gi|39934824|ref|NP_947100.1| cation efflux pump HlyD [Rhodopseudomonas palustris CGA009]
 gi|39648674|emb|CAE27196.1| possible cation/heavy metal efflux pump, HlyD family secretion
           protein [Rhodopseudomonas palustris CGA009]
          Length = 400

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 59/204 (28%), Gaps = 20/204 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLE 267
            +++ +    ++ + ++  +L       K     +N         F  A  + E + DL 
Sbjct: 107 VIAEIEAPDLDQQLLQARADLASQQASAKLSEATLNRRKTLVASNFVSAQEIDERTADLA 166

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPH 324
             +       + +  LE     K I +P  G +   ++              P M +V  
Sbjct: 167 AKKAAVNSGQANVERLEALAGYKKITAPFDGVVTE-RNTDVGALINAGSSSGPAMFVVSD 225

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                +   V       V+ G  A +  P Y         A +E     +      ++ Q
Sbjct: 226 IAKLRVYVNVPQNYAPLVRIGGKAVIALPEYPGRTFP---ATVEASSQAVDVASGTMRIQ 282

Query: 385 EYYEVILKITDLAFSDNNIELRNG 408
                      L   +   EL  G
Sbjct: 283 -----------LGLDNAKGELMPG 295


>gi|308233460|ref|ZP_07664197.1| efflux transporter, RND family, MFP subunit [Atopobium vaginae DSM
           15829]
          Length = 342

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 68/240 (28%), Gaps = 45/240 (18%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA-------NYLKEISR 264
           +QN LN  ++ V  +           +  L   N        +           +     
Sbjct: 42  AQNQLNVAKKQVKSARDAYSRAYASYRKALNEYNSAPSAEVQKALPDPDTVYESVASAQS 101

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ--------SFSSSNYAQQSQ 316
            ++Q +       S +    +   ++T+++P  G ++           S ++       Q
Sbjct: 102 AIDQAKLAADQAQSAVDDAREKANKRTVVAPCDGNVITMNAKRGAAVGSLTAGMAGSIGQ 161

Query: 317 PLMKIVPHSKLTY---------IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                 P + +           +R  V+   I  +K G  A V F     +      A++
Sbjct: 162 N-----PENGILIQIADLSKMRVRLSVSEIDISAIKPGQQAKVTFSALPGVT---CDAVV 213

Query: 368 EKIDPIISQQ--------DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           E I                    T   Y V + I        +  ++ G  A+V    + 
Sbjct: 214 ENIASTAENAAVSPSQMGAATSNTMANYAVDVLID-----KPHESIKCGMTADVEIVTQE 268



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 39/121 (32%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GII + +V  G+ + +G  L T ++      +   +  +   +  + + + A       Y
Sbjct: 8   GIIDEVRVNQGANVKKGDVLFTIKNDTLDKAVQTAQNQLNVAKKQVKSARDAYSRAYASY 67

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                 + S     +        T  +      S++ ++         ++   R     +
Sbjct: 68  RKALNEYNSAPSAEVQKALPDPDTVYESVASAQSAIDQAKLAADQAQSAVDDAREKANKR 127

Query: 185 S 185
           +
Sbjct: 128 T 128


>gi|260597280|ref|YP_003209851.1| macrolide transporter subunit MacA [Cronobacter turicensis z3032]
 gi|260216457|emb|CBA29586.1| Macrolide-specific efflux protein macA [Cronobacter turicensis
           z3032]
          Length = 370

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 63/204 (30%), Gaps = 15/204 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ ++L      ++  L     +  +     A  L      +          
Sbjct: 111 LRAQRRQAEAEMKLARVTLSRQQQLARTQAISRQDLDTAATELAVKEAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L+      +   I +PIAG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLSTANTNLDYTRITAPIAGEVTQITTLQGQTVIAAQQAPNILTLA-DLSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   I H+K G  A   F    D    +++  ++     I      +    +Y    ++ 
Sbjct: 230 SEADIIHLKPGQKAW--FTVLGDPLT-RYEGRLK----DILPTPEKINDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAK 418
                +    LR    A+V     
Sbjct: 283 -----NPQGVLRLDMTAQVHIQLG 301



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/177 (11%), Positives = 61/177 (34%), Gaps = 12/177 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVNIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++  +    +  +  +   +R + +        +T   V    I +
Sbjct: 105 EATLMELRAQ--RRQAEAEMKLARVTLSRQQQLARTQAISRQDLDTAATELAVKEAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN---------RLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           +   +K     + +   N               + + L+       +    +  L +
Sbjct: 163 IDAQIKRNQASLSTANTNLDYTRITAPIAGEVTQITTLQGQTVIAAQQAPNILTLAD 219


>gi|254689554|ref|ZP_05152808.1| Gram-negative bacterial RTX secretion protein D [Brucella abortus
           bv. 6 str. 870]
 gi|260755079|ref|ZP_05867427.1| secretion protein HlyD family protein [Brucella abortus bv. 6 str.
           870]
 gi|260675187|gb|EEX62008.1| secretion protein HlyD family protein [Brucella abortus bv. 6 str.
           870]
          Length = 355

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 54/163 (33%), Gaps = 4/163 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +     S+  +   +  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRL--ARSRQLSESRTVS 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            + L       +         + + +   A + S +  +   +
Sbjct: 151 QQVLNDDRATAQGAEAAVGAAKAQLAATDAAIGSAKAQVVDAQ 193


>gi|221632984|ref|YP_002522207.1| DNA-directed RNA polymerase subunit beta' [Thermomicrobium roseum
           DSM 5159]
 gi|221155525|gb|ACM04652.1| DNA-directed RNA polymerase, beta' subunit [Thermomicrobium roseum
           DSM 5159]
          Length = 1459

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 5/206 (2%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           T      ++  I+N+R  +  E   LD L+ + +   +  E  +   L  L        +
Sbjct: 149 TRVDEAKRQELIENIRQELQAE---LDELDRQLEAKRRELEEAQGTELLALRDRREALER 205

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL-LSSHQKDLTMMKNLFEKNA 210
                + S    ++ +   +R      L    +  L  A  L + + ++   ++L E + 
Sbjct: 206 EARERVVSEVERVRRQAAGLRERLQEALGTPAEEDLEFAGRLIAARGEILTERHLAELDE 265

Query: 211 VSQNDLNQQERIVYKS-TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             Q  +N+ ER    + + E      EQ+ +   I E       E      ++  + ++ 
Sbjct: 266 AEQEAVNEAERNARSAVSGEQALVEAEQEFLTGRIAEQLATLQSEIERQKADLRAEADEL 325

Query: 270 QRTFADEMSKLTILEKTREQKTILSP 295
            R   +      + E+       L+P
Sbjct: 326 IRQVQEIHELQVLTEQQYRDLADLAP 351


>gi|194436387|ref|ZP_03068488.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 101-1]
 gi|253773397|ref|YP_003036228.1| secretion protein HlyD [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|254161706|ref|YP_003044814.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli B str.
           REL606]
 gi|297516770|ref|ZP_06935156.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli OP50]
 gi|300918011|ref|ZP_07134634.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 115-1]
 gi|300930890|ref|ZP_07146258.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 187-1]
 gi|194424419|gb|EDX40405.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli 101-1]
 gi|242377375|emb|CAQ32121.1| conserved protein [Escherichia coli BL21(DE3)]
 gi|253324441|gb|ACT29043.1| secretion protein HlyD family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973607|gb|ACT39278.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli B str.
           REL606]
 gi|253977802|gb|ACT43472.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli BL21(DE3)]
 gi|300414792|gb|EFJ98102.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 115-1]
 gi|300461266|gb|EFK24759.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 187-1]
 gi|323962137|gb|EGB57732.1| HlyD family protein secretion protein [Escherichia coli H489]
 gi|323973975|gb|EGB69147.1| HlyD family protein secretion protein [Escherichia coli TA007]
          Length = 285

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 70/220 (31%), Gaps = 27/220 (12%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           M+S +     +  +   +   +S    +L +     +   V+  DL            EL
Sbjct: 30  MQSPWTRDGKIRAEQVSITPQVSGRIVELNIK----DNQLVNAGDLLLTIDKTPFQIAEL 85

Query: 231 RENIHEQKNMLRHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTI 282
                +       + +  +EAN           A  L   + +++  Q +     + L  
Sbjct: 86  NAQ-AQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQ 144

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQ 338
            +    Q  I +P++G +    +    +YA   +PL  +V       I      K+    
Sbjct: 145 TQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR--- 200

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
             H+++G  A +          K  +  +  I   I  Q 
Sbjct: 201 --HIREGAPAQITL----YSDNKTLRGHVSSIGRAIYDQS 234



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 156


>gi|156347065|ref|XP_001621626.1| hypothetical protein NEMVEDRAFT_v1g221772 [Nematostella vectensis]
 gi|156207754|gb|EDO29526.1| predicted protein [Nematostella vectensis]
          Length = 419

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 60/198 (30%), Gaps = 17/198 (8%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +  L        +A  +     +E+      N   F   +++L        +  I +P 
Sbjct: 212 ARKALHSAEAAVVKAQADLQRARQELGPTGMDN-PQFKQALAQLEKARLDLVRTEITAPA 270

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G I   Q  +       SQP +  +  +   ++ A      ++HV+   TA + F    
Sbjct: 271 DGVITNLQL-AVGQVISASQPALTFI-DTGTVWVSAAFKENSLEHVQADDTAELVFDVLP 328

Query: 357 DIRE----------KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
                            +       P +  +   ++  + + V L + +         LR
Sbjct: 329 GRIFNARVESVGWGVATEGTSSSALPSVRNESGWVRDPQRFPVRLVVMEPYPKG----LR 384

Query: 407 NGFPAEVLFTAKNTTLAQ 424
            G    V+    +  LA 
Sbjct: 385 YGSQVTVVIYTGDNPLAN 402


>gi|191172144|ref|ZP_03033688.1| macrolide-specific efflux protein MacA [Escherichia coli F11]
 gi|26107304|gb|AAN79487.1|AE016758_91 Macrolide-specific efflux protein macA precursor [Escherichia coli
           CFT073]
 gi|190907671|gb|EDV67266.1| macrolide-specific efflux protein MacA [Escherichia coli F11]
          Length = 380

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 120 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRN 179

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 180 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 238

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 239 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKINDAIFYYARFEVP 291

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 292 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 330



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 55  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 113

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 114 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNA--ATEMAVKQAQIGT 171

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 172 IDAQIKRNQASLDTAKTN 189


>gi|47229714|emb|CAG06910.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1389

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 80/212 (37%), Gaps = 8/212 (3%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  E+ + ++ K  S++  +  +  E   L    ++ + L  + + ++      L ++  
Sbjct: 860  DAEESIEAVNAKCASLEKTKQRLQGEVEDLMIDVDRANALAASLDKKQRNFDKVLAEWKQ 919

Query: 148  --TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                S+    G     RSL  +L +M++ Y   LD   +   L+    + Q++++ +   
Sbjct: 920  KYEESQAELEGAQKEARSLSTELFKMKNSYEEALD---QLETLKRENKNLQQEISDLTEQ 976

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
              +   + ++L + ++       EL+ ++ E +  L H         LE      EI R 
Sbjct: 977  IGETGKTIHELEKGKKTAESEKCELQTSLEEAEATLEHEESKILRIQLELTQVKSEIDRK 1036

Query: 266  LEQNQRTFADEM---SKLTILEKTREQKTILS 294
            L +             ++    ++     + S
Sbjct: 1037 LAEKDEEMEQIKRNSQRVIESMQSALDAEVRS 1068



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 83/276 (30%), Gaps = 43/276 (15%)

Query: 52   NEDNVVEIK-SPFSGIIKKFQVENG-SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
             +  + + +      I  + +++   + + +   L+  E  E    ++  + S K     
Sbjct: 1107 VQGQLKDAQLHLDEAIRSQEEMKEQVAMVERRNNLMVAEIEELRAALEQTERSRKVAEQE 1166

Query: 110  IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL- 168
            +      +  L+++   L    +  E  L+   G+   +  +  N    +        + 
Sbjct: 1167 LVDASERVGLLHSQNTSLINTKKKLEADLIQIQGEVEDSVQEARNAEEKAKKAITDAAMM 1226

Query: 169  -TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-------AVSQNDLNQQE 220
               ++        LE     L   +   Q  L   +NL  K          ++    + E
Sbjct: 1227 AEELKKEQDTSAHLERMKKNLEVTVKDLQHRLDEAENLAMKGGKKQLQKLEARVRELESE 1286

Query: 221  ---------------RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE---- 261
                           R   +   EL     E K  L  + +L D+  L+  +Y ++    
Sbjct: 1287 VEAEQRRGADAIKGVRKYERRVKELTYQTEEDKKNLVRLQDLVDKLQLKMKSYKRQAEDS 1346

Query: 262  -------------ISRDLEQNQRTFADEMSKLTILE 284
                         +  +LE+ Q       S++  L 
Sbjct: 1347 EEQANSHLTRYRKVQHELEEAQERADIAESQVNKLR 1382


>gi|331268915|ref|YP_004395407.1| efflux transporter, RND family [Clostridium botulinum BKT015925]
 gi|329125465|gb|AEB75410.1| efflux transporter, RND family [Clostridium botulinum BKT015925]
          Length = 395

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 55/163 (33%), Gaps = 7/163 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +     + G+++       +     GIIK+  ++ GS++  G  L   ++ E  D ID  
Sbjct: 68  LTGVFVAKGDVIVV--PKIV-----GIIKEMPIKLGSKVNVGDTLAVLDNKEVKDRIDQT 120

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K ++   +  ++  K  L    +  +V   +++  + +      K      +     +  
Sbjct: 121 KAAMDTAKVAVEQSKLGLKQSQDAVNVANSSYKIIKAEYEKIKSKELDNFQQSLKNQLDE 180

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
               +      + S        E      + L    QK +  +
Sbjct: 181 AEIRVNQCSKSVESSKEFVKQSETTYETSKKLYEQAQKAMEDI 223



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 65/190 (34%), Gaps = 23/190 (12%)

Query: 236 EQKNMLRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKL-TILEKTREQKTI 292
           E  N  + +    DEA +      K  E S++  +   T  +   KL    +K  E   +
Sbjct: 166 ELDNFQQSLKNQLDEAEIRVNQCSKSVESSKEFVKQSETTYETSKKLYEQAQKAMEDIVV 225

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ--IQHVKKGYTATV 350
            +PI+  I+   S      A  ++P+M +V   K   IRA +   +  I  +K G     
Sbjct: 226 KAPIS-GIISILSIKKGEVASNARPIMTMVNVEK---IRANIEIPEGIINKIKIGDKLD- 280

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
              +   +  KK    +  ++     +                 ++   + + +++ G  
Sbjct: 281 --TYIVPLSNKKVIGTVMAVNSAKKSKSKVSTI-----------EVEVENEDSKIKPGMF 327

Query: 411 AEVLFTAKNT 420
             V     + 
Sbjct: 328 VNVKINTDSK 337


>gi|283779003|ref|YP_003369758.1| efflux transporter, RND family, MFP subunit [Pirellula staleyi DSM
           6068]
 gi|283437456|gb|ADB15898.1| efflux transporter, RND family, MFP subunit [Pirellula staleyi DSM
           6068]
          Length = 454

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/379 (12%), Positives = 115/379 (30%), Gaps = 76/379 (20%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G I   +    I +  +G + K  V+ G ++  G  LL          I   +  +K  
Sbjct: 71  PGTIEPIEQT-PIHAKVTGYVSKVHVDLGDRVKTGDVLLEI-------AIPEYEQELKQK 122

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  +   K+     + +  V E A  S E  +++       + ++               
Sbjct: 123 QALVAQSKAETSQADARVKVAEAAVRSAEALVVEAKAGLERSTAE--------------- 167

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                                    L     +L+ ++ LF   A+++  L + +     +
Sbjct: 168 -------------------------LERADTELSRLELLFADQAITEKVLEESKAGQRAA 202

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
                  + E +  +     + +E          ++     +     ADE ++L  +   
Sbjct: 203 AA----AVAEAQARIASSEAVVEEKRAGIEQAQADVQAASSRTDVALADE-ARLRAIHD- 256

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK--IVPHSKLTYIRAKVTPKQIQH--V 342
                I SP  G +    + +  ++ Q  +      +V  S+   +R  V   +I    +
Sbjct: 257 --YTKITSPFDGIVTMRNADT-GHFVQPGKGASDKPLVHLSRTDVVRVYVEVPEIDASLI 313

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
                A ++ P        K +  + +    ++     L+             +   + +
Sbjct: 314 SNECDAVIQIPALGS----KIEGKVSRSSWQLNPSTRTLRAA-----------IDLPNAD 358

Query: 403 IELRNGFPAEVLFTAKNTT 421
            +LR G     + T  + +
Sbjct: 359 SKLRPGLYVLAVLTVADKS 377


>gi|188997514|ref|YP_001931765.1| efflux transporter, RND family, MFP subunit [Sulfurihydrogenibium
           sp. YO3AOP1]
 gi|188932581|gb|ACD67211.1| efflux transporter, RND family, MFP subunit [Sulfurihydrogenibium
           sp. YO3AOP1]
          Length = 346

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 74/243 (30%), Gaps = 60/243 (24%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            DL ++   L   LS  ++   + K L+E  A+ + +L                      
Sbjct: 101 TDLYSQKVALSVQLSQAERIYKLKKELYEVGAIPKAELM--------------------- 139

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                                 +   +    +        K+ +L  T     I SPI G
Sbjct: 140 ----------------------DAETNYNVLKAQLKGIEEKMKLLGGTLGSSVITSPIDG 177

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +    S    +   Q+  ++ +V  +K+  + A V  K +  +K+G         + D 
Sbjct: 178 IVYQINSH-VGDSVDQTTEILSLVNPNKIMVV-ALVQDKDVFKLKEGDDVDFSIDLFQD- 234

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             KKF+ +++ I  ++      +      +V ++  +      N          +     
Sbjct: 235 --KKFQGVVKYISDVVDPDTKKI------KVFIEPKEKEALKIN------MFFNIRIYTG 280

Query: 419 NTT 421
             T
Sbjct: 281 KQT 283



 Score = 43.5 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 9/108 (8%)

Query: 46  SSGEILNEDN-VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           ++G +  + +  V+I S   GII+   V+ G  + +G  L + +  +TTDL   K     
Sbjct: 53  ATGLVQPDKDGTVKITSKLPGIIQSINVQVGDYVKKGQVLASVKAPDTTDLYSQKVA--- 109

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                +  + S  + +      L +     + +L+D    Y+   +++
Sbjct: 110 -----LSVQLSQAERIYKLKKELYEVGAIPKAELMDAETNYNVLKAQL 152


>gi|86747298|ref|YP_483794.1| secretion protein HlyD [Rhodopseudomonas palustris HaA2]
 gi|86570326|gb|ABD04883.1| Secretion protein HlyD [Rhodopseudomonas palustris HaA2]
          Length = 356

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/96 (14%), Positives = 29/96 (30%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+   V  G  +  G  L   +  +        +  ++     I+T  S +     + 
Sbjct: 57  GRIRDILVREGDFVTAGQVLARMDTDQLEAQRRQAEAQLRRASIGIETATSLVTQREAER 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +        R+ QL     K     + +    +S  
Sbjct: 117 EAAVAVIAQRDAQLDALERKLARAEALIKTSAVSQQ 152



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/297 (10%), Positives = 72/297 (24%), Gaps = 19/297 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F +  + L            +     +      ++   + +      R       
Sbjct: 64  VREGDFVTAGQVLARMDTDQLEAQRRQAEAQLRRASIGIETATSLVTQREAEREAAVAVI 123

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +   A L + ++ L   + L + +AVSQ  L+        +   +     +       I+
Sbjct: 124 AQRDAQLDALERKLARAEALIKTSAVSQQVLDDDRANEQGAKAAVAAAKAQLAASEAAIS 183

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               +     A      +                   +       T+ SP  G + Y + 
Sbjct: 184 SAKAQVIDAGAAVDAAKAAI---------------DSITVEINDSTLKSPRDGRVQY-RV 227

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +   Q   +  G    +       +       
Sbjct: 228 AQPGEVIAAGGRVLNLVDLSD-VYMTFFLPTAQAGQIAIGADVRLVLDALPQVVIPAKAT 286

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +        +  +    + +  + V   I           ++ G P          
Sbjct: 287 FVADTAQFTPKTVETEEERQKLMFRVKAHIPQELLRKYIQRVKTGLPGVAYIRLDPK 343


>gi|33862862|ref|NP_894422.1| ABC transporter [Prochlorococcus marinus str. MIT 9313]
 gi|33634778|emb|CAE20764.1| possible ABC transporter component [Prochlorococcus marinus str.
           MIT 9313]
          Length = 294

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 90/253 (35%), Gaps = 9/253 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSG-----IIKKFQVENGSQILQGTPLLTFEDI-ETTDL 95
            +V++ G++    +V  + +P SG      + K  V  G  + +G  L  F++  +T   
Sbjct: 38  EAVAALGQLEPAGDVRRLAAPASGFGGTPRVAKLSVREGDAVKRGQVLAEFDNRPKTFAD 97

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA---FESREEQLLDFLGKYHSTCSKV 152
           +   +  ++ L   +  ++  +        V   +    E ++E+L+   G+     +++
Sbjct: 98  LAAVQARLETLEVQLRMQQREVTRYQKAALVGASSLVDLEEKQEELVKIDGQRREALAEI 157

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                      LK  L  +      R+     S  +  + ++   +  +     + N V+
Sbjct: 158 SGLEADLADSQLKSPLDGVVLRVHTRVGERPGSDGVMEVGANQTMEALIEVYESDVNRVN 217

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
              + +           L   +      +R  N L  +   +    + E+   L+QN   
Sbjct: 218 VGQVVRLTSENGGFDGTLMGRVERISPQVRQRNVLSTDPTGDADARVVEVRVSLDQNSAA 277

Query: 273 FADEMSKLTILEK 285
               ++ + ++ +
Sbjct: 278 RVRSLAGMKVIAR 290



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 63/197 (31%), Gaps = 15/197 (7%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFADEMS 278
             +      L     + +   R +      A +  ++   L+E   +L +      + ++
Sbjct: 96  ADLAAVQARLETLEVQLRMQQREVTRYQKAALVGASSLVDLEEKQEELVKIDGQRREALA 155

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +++ LE       + SP+ G +   +  +       S  +M+ V  ++      +V    
Sbjct: 156 EISGLEADLADSQLKSPLDGVV--LRVHTRVGERPGSDGVME-VGANQTMEALIEVYESD 212

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP------IISQQDNNLQTQEYYEVILK 392
           +  V  G    VR        +      +E+I P      ++S            EV + 
Sbjct: 213 VNRVNVGQ--VVRLTSENGGFDGTLMGRVERISPQVRQRNVLSTDPTGDADARVVEVRVS 270

Query: 393 ITDLAFSDNNIELRNGF 409
           +   + +   +    G 
Sbjct: 271 LDQNSAAR--VRSLAGM 285


>gi|316985411|gb|EFV64359.1| macA [Neisseria meningitidis H44/76]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 78/262 (29%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        N    E      +       ++ + +         +
Sbjct: 112 LVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELKALIRQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 172 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 230

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 231 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 287

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 288 SFVP-----NPDGKLSTGMTTQ 304


>gi|266621487|ref|ZP_06114422.1| auxiliary transport protein, membrane fusion protein [Clostridium
           hathewayi DSM 13479]
 gi|288866863|gb|EFC99161.1| auxiliary transport protein, membrane fusion protein [Clostridium
           hathewayi DSM 13479]
          Length = 395

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 108/308 (35%), Gaps = 18/308 (5%)

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           A  F  ++ +V+E    S   +  D +    +  +++    +    R  K +L       
Sbjct: 21  AATFPLSRGEVVEMLSVSGPVEGTDSVEVVSNLHAEILEIPVKEGDRVEKGQLLATLDEK 80

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
             + +++   +     ++++ +     +N + K   ++ D +  +    ++ +  +    
Sbjct: 81  DAKKEVDIAQNAYDLAVTTYNEKQIEAENGYAK---ARQDYDAAKANYDRTNVLFQAGSA 137

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS--KLTILEKTREQKTIL 293
            Q   L ++++  + A  E   +  +  R +     +   E +  +L   ++      + 
Sbjct: 138 SQ-LELENVSDALNNAQRELKTFTLKDGRPVANESYSLQIENAAFELDQKKELLANTKVT 196

Query: 294 SPIAGTIVYNQSFSSSNYA--QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           SPIAGT+V         +A        M I+ +  +  ++  V+   I  VK G    + 
Sbjct: 197 SPIAGTVVRVNC-KVGRFADKTDDDKPMFIIENLDVLEMKINVSEYSIGKVKIGQPVEI- 254

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
                 +  +  K  +  I P   ++ N           +  T +   D N  L  G  A
Sbjct: 255 -SA-DILNGENVKGEVTAISPTGEEKGNGSTE------RVIPTTIRIIDQNTRLIAGITA 306

Query: 412 EVLFTAKN 419
           +     + 
Sbjct: 307 KAKIELQK 314



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 62/189 (32%), Gaps = 23/189 (12%)

Query: 35  SILLPIEISVSS-----SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
           +   P+           SG +   D+V  + +  + I+ +  V+ G ++ +G  L T ++
Sbjct: 21  AATFPLSRGEVVEMLSVSGPVEGTDSVEVVSNLHAEIL-EIPVKEGDRVEKGQLLATLDE 79

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            +    +D+ + +                   N+  +  +   ++  Q  D     +   
Sbjct: 80  KDAKKEVDIAQNAY-----------DLAVTTYNEKQIEAENGYAKARQDYDAAKANYDRT 128

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           + +F  G +S      +      S  LN    E K+  L+       +  ++        
Sbjct: 129 NVLFQAGSASQLELENV------SDALNNAQRELKTFTLKDGRPVANESYSLQIENAAFE 182

Query: 210 AVSQNDLNQ 218
              + +L  
Sbjct: 183 LDQKKELLA 191


>gi|262281161|ref|ZP_06058943.1| nodulation protein [Acinetobacter calcoaceticus RUH2202]
 gi|262257392|gb|EEY76128.1| nodulation protein [Acinetobacter calcoaceticus RUH2202]
          Length = 372

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 13/213 (6%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           R       +  +   ++ +   +    +   ++  L  ++ V++    +      +S  E
Sbjct: 68  RAVQQSSIQAQVSATATTVTTNVGQQVQKGQVLVRLNNQDNVARLAQARANLASAQSQAE 127

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L  N+  +K  L +   +   A +EF     +    LE  +   A+    + I  K  + 
Sbjct: 128 LARNLMNRKQRLFNQGFI---ARVEFEQSQVDYKGQLESVKAQQAN----VDIARKADQD 180

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I SPI+G I   Q           Q L +IV +     I+AK+  +Q   +K G +  
Sbjct: 181 GIITSPISGVITKRQV-EPGQTVSVGQTLFEIV-NPDQLEIQAKLPIEQQSALKVGNSIQ 238

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
            +         K+  A + +I P+  Q    ++
Sbjct: 239 YQI----QGNSKQLNATLTRISPVADQDSRQIE 267



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 23/221 (10%), Positives = 80/221 (36%), Gaps = 14/221 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++   + +G I        I++  S          G Q+ +G  L+   + +    +   
Sbjct: 57  LDSQTAFTGTIRAVQQS-SIQAQVSATATTVTTNVGQQVQKGQVLVRLNNQDNVARLAQA 115

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++ + +   +  ++ ++     ++    A    E+  +D+ G+  S  ++  N  I+ 
Sbjct: 116 RANLASAQSQAELARNLMNRKQRLFNQGFIARVEFEQSQVDYKGQLESVKAQQANVDIAR 175

Query: 160 VYRSLKMKLTRMRSIYLNRL----DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                 +  + +  +   R        +    L  +++  Q ++     + +++A+    
Sbjct: 176 KADQDGIITSPISGVITKRQVEPGQTVSVGQTLFEIVNPDQLEIQAKLPIEQQSAL---- 231

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                ++      +++ N  +    L  I+ + D+ + +  
Sbjct: 232 -----KVGNSIQYQIQGNSKQLNATLTRISPVADQDSRQIE 267


>gi|251792499|ref|YP_003007225.1| MacA [Aggregatibacter aphrophilus NJ8700]
 gi|247533892|gb|ACS97138.1| MacA [Aggregatibacter aphrophilus NJ8700]
          Length = 394

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 46/99 (46%), Gaps = 1/99 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G I    N V++ +  SG + +  V  G Q+ +G  +   +     ++++ +
Sbjct: 42  IEKNVVATGSIE-SINTVDVGAQVSGKVTRLYVTLGQQVNKGDLIADIDSTTQINMLNTR 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
           K  +   +  +   K+A D   + Y+ L K +  +   L
Sbjct: 101 KAELAGYQAQLIARKTAYDVAQSNYNRLSKLYSQKATSL 139



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 91/301 (30%), Gaps = 62/301 (20%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q+   + + + T  +  N G          ++  + +        + +    +      
Sbjct: 62  AQVSGKVTRLYVTLGQQVNKGDLIADIDSTTQINMLNTRKAELAGYQAQLIARKTAYDVA 121

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q +   +  L+ + A S + LN  +  +  +  E           +  I E   +A +E 
Sbjct: 122 QSNYNRLSKLYSQKATSLDILNTAKSTLDNAKAE-----------MNVIQENIKQAEIEV 170

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                       E       I +PI GT++     S       +
Sbjct: 171 -------------------------NTAETNVGYTKITAPIDGTVISIPV-SEGQTVNSN 204

Query: 316 QPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
           Q    IV  +      I+ +++   I  VK G +  V F   +D + K ++A I+ +DP 
Sbjct: 205 QTTPTIVKIADLSKMRIKPEISEGDITKVKAGQS--VSFTILSDNK-KVYQAKIDSVDPA 261

Query: 374 ISQ---------------QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            +                  N+  +  YY   + +      + +  LR G   E      
Sbjct: 262 TTTISDNSSNSSSSGSSSSSNSSSSAVYYYANIVVD-----NPDQVLRIGMTTENNIKIA 316

Query: 419 N 419
            
Sbjct: 317 E 317


>gi|149209961|ref|XP_001522355.1| hypothetical protein MGCH7_ch7g462 [Magnaporthe oryzae 70-15]
 gi|86196417|gb|EAQ71055.1| hypothetical protein MGCH7_ch7g462 [Magnaporthe oryzae 70-15]
          Length = 2412

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 77/235 (32%), Gaps = 14/235 (5%)

Query: 77   QILQGTPLL---TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAF 131
            +I +   LL      D +       ++     L      E+  +  +N   + D L    
Sbjct: 1879 RIKKEQELLARQEVLDAKLQAEARTRERLESELERLEAGERQGIRAVNECKRLDTLLAEL 1938

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN----RLDLENKSSL 187
            ++   QL     +Y     +  +     V R+     +++          R +LE++   
Sbjct: 1939 KTENHQLQQSSMRYQIEFQEARDSAAREVQRTRDAMQSQIDQANHEVNVVREELEDQVQR 1998

Query: 188  LRALLSSHQKDLTMMKN-----LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +RA L   + D    K      L +  A  + ++    R       +L+E      N   
Sbjct: 1999 VRAQLDQVKLDADTSKAKYEMLLEDAQATHKTEMETLARKHQVEIEDLQERHERIVNNTT 2058

Query: 243  HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +  ++  LE  +     S +L++  +   + +           +   LSP+A
Sbjct: 2059 EDAQRLEQNLLERLSISTSKSTNLQERIQHLEERLEIAKEAAAAAARAAKLSPVA 2113



 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 77/211 (36%), Gaps = 21/211 (9%)

Query: 90   IETTDLIDLKKVSIKNLRCH----IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E+   I   K +I+ +R      +  +    D  N   D +E+      + +     + 
Sbjct: 1570 TESDGDISAVKKAIEEMREQFGKSLHLDFRGEDLRNIVEDAVERRMVPTPQPVAVKGQED 1629

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT---MM 202
             S          + + + L+++  ++ +  + R   E++++  +  L   +  +    M 
Sbjct: 1630 LSEKFNELQAKAADLEQRLRLEEAKVETELVLRRTAEDRAAEFQRNLEMAETKIEVEIMN 1689

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            ++++++       ++  E       L+ +E   EQ+   R   E     N        E 
Sbjct: 1690 RSVYDQ------RVHDLE-----ERLKHQEVKAEQEASARRTAEDRLAENQRLLRISSEE 1738

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               L +      ++  K+  +E+++ + T+ 
Sbjct: 1739 ETRLREA---LEEKEQKIKSIEESKGKTTMR 1766


>gi|315127954|ref|YP_004069957.1| substate-binding protein involved in drug resistance
           [Pseudoalteromonas sp. SM9913]
 gi|315016468|gb|ADT69806.1| substate-binding protein involved in drug resistance
           [Pseudoalteromonas sp. SM9913]
          Length = 388

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 45/132 (34%), Gaps = 3/132 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  S+ +SG ++    V  ++S  +G + K  VE G  + QG  L+  +       +   
Sbjct: 42  IADSIMASGNLVFNTQVQ-LRSEVTGRVDKVFVEEGQSVKQGDILMRLDTTAFESEVTRN 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  ++     I   K+ L  LN +  +  +            + +       +    I +
Sbjct: 101 KAVLRASEIEIKHSKTRL--LNFERQLKRQKELYDVGLAGQEVYENLQNARDLAKIDIEA 158

Query: 160 VYRSLKMKLTRM 171
              S       +
Sbjct: 159 RVESYNQAKASL 170



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/219 (12%), Positives = 64/219 (29%), Gaps = 25/219 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY---------DEANLEFANYLKEIS 263
           ++++ + + ++  S +E++ +     N  R +              E      N      
Sbjct: 94  ESEVTRNKAVLRASEIEIKHSKTRLLNFERQLKRQKELYDVGLAGQEVYENLQNARDLAK 153

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-----SQPL 318
            D+E    ++    + L+I E    +    +P++G +                      L
Sbjct: 154 IDIEARVESYNQAKASLSIAEDRLSKSVFRAPMSGLLASVNIKEGETVIAGTTNIIGSDL 213

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M +V          +V    I  +K    A +    Y +     F   +  I    ++  
Sbjct: 214 M-LVADPSAILAELRVDETDIAGIKLDQHADIYAAAYPNQ---PFTGKVINI-GTSAKNQ 268

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
              Q   +  V + +      + + +L  G         
Sbjct: 269 AGSQGLSF-RVKVLLD-----NTDRQLYAGMSCRAEIAT 301


>gi|213580187|ref|ZP_03362013.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 97

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 21/67 (31%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + I   V   G I  +DN   I     G I+   V  G  + +G  L    + +    
Sbjct: 16  YFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNFDLQKE 75

Query: 96  IDLKKVS 102
               +  
Sbjct: 76  YQRYRTQ 82


>gi|188996767|ref|YP_001931018.1| efflux transporter, RND family, MFP subunit [Sulfurihydrogenibium
           sp. YO3AOP1]
 gi|188931834|gb|ACD66464.1| efflux transporter, RND family, MFP subunit [Sulfurihydrogenibium
           sp. YO3AOP1]
          Length = 372

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 21/163 (12%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT---------FEDIET 92
            S+ +SG I   +N V +KS  SG ++K  V+   Q+ +G  +            +DIE 
Sbjct: 40  KSIYASGYID-SENSVIVKSEVSGYVEKIYVKENDQVKKGQIIAKISNPTLYENLKDIEF 98

Query: 93  TDLI---------DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
              +         D +K  I+N+       ++ L     + ++ EK    +E+   D + 
Sbjct: 99  QAQLVKQKLSENSDFRKQFIENIEMKKANYENLLKVYERRKNLFEKGLIPKEQ--FDEVA 156

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           K      + +   ++S   SLK    +++S    + ++  +  
Sbjct: 157 KNLEVAKRDYEKAVASYQDSLKELSYQLKSFEAKKAEVAKEID 199



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 94/301 (31%), Gaps = 52/301 (17%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +EK +    +Q+         +   ++       +++  +K     +    +  +EN   
Sbjct: 64  VEKIYVKENDQVKKGQIIAKISNPTLYENLKDIEFQAQLVKQKLSENSDFRKQFIEN-IE 122

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           + +A   +  K     KNLFEK  + +                  E   E    L     
Sbjct: 123 MKKANYENLLKVYERRKNLFEKGLIPK------------------EQFDEVAKNLEVAKR 164

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            Y++A   + + LKE+S  L+  +   A+         K  ++  I SP  G ++     
Sbjct: 165 DYEKAVASYQDSLKELSYQLKSFEAKKAEV-------AKEIDKYYIKSPTDGKVLRKFVN 217

Query: 307 SSSNYAQ---QSQPLMKIVPHSKL---TYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              +Y     Q+  L  I    K      +  +  P     +K+G    V+   Y D   
Sbjct: 218 -EGDYINNISQNNQLFAIGSLDKRETVLLVDEEYAP----LLKEGMEVLVKLDSYPD--- 269

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           K F   I+ I+    +              +K+      D  + L      E        
Sbjct: 270 KVFTGKIKTIESQSDKNSRT----------VKVKADVNYDRPVLLN--MTVESNIILGKV 317

Query: 421 T 421
           +
Sbjct: 318 S 318


>gi|114657227|ref|XP_510437.2| PREDICTED: cingulin-like 1 [Pan troglodytes]
          Length = 1302

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 13/204 (6%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            + +      +  +   +R  +  E++  + L  + + LE+     + Q+ D  G      
Sbjct: 806  LASRSNTSEQDQAGTEMRVKLLQEEN--EKLQGRSEELERRVAQLQRQIEDLKGDEAKAK 863

Query: 150  S--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               K +   I  +  +L       +     R  LEN+    +  LS   ++   +    +
Sbjct: 864  ETLKNYEGEIRQLEEALVHARKEEKEAVSARSALENELEAAQGNLSRTTQEQKQLSEKLK 923

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI----S 263
            + +  +  L + +  +      L + I + +  +  I E    + LE  N L E      
Sbjct: 924  EESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADIVEASRTSTLELQNQLDEYKEKNR 983

Query: 264  RDLEQNQRTFAD-----EMSKLTI 282
            R+L + QR   +     E S+LT 
Sbjct: 984  RELAEMQRQLKEKTLEAEKSRLTA 1007



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 74/224 (33%), Gaps = 3/224 (1%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V+N   I +    +     E     + K      L+  ++  +  L     +   ++
Sbjct: 631 QLEVKNQQNIKEERERMRANLEELRSQHNEKVEENSTLQQRLEESEGELRKNLEELFQVK 690

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E  + ++ D   +      +  +    S  R     +  +     +  DL       
Sbjct: 691 MEREQHQTEIRDLQDQLSEMHDE-LDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQ 749

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             LL   +++LT +K   ++   S   ++++ +         LRE++ E    +  +   
Sbjct: 750 EDLLRKRERELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASR 809

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            + +  + A     + + L++          +L       +++ 
Sbjct: 810 SNTSEQDQAGTEMRV-KLLQEENEKLQGRSEELERRVAQLQRQI 852



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 74/209 (35%), Gaps = 10/209 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++ +  +  +L ++  +     ++ EKS L  +      ++      EE+L D+    
Sbjct: 974  QLDEYKEKNRRELAEMQRQLKEKTLEAEKSRLTAMK-----MQDEMRLMEEELRDYQRAQ 1028

Query: 146  HS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                T  ++    +  +   L+ K             +E+K S L   L   +++     
Sbjct: 1029 DEALTKRQLLEQTLKDLEYELEAKSHLKDDRSRLVKQMEDKVSQLEMEL---EEERNNSD 1085

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+ + S+  + Q    + +     ++   ++ ++ R   +L         +Y     
Sbjct: 1086 LLSERISRSREQMEQVRNELLQERAARQDLECDKISLERQNKDLKSRIIHLEGSYRSSKE 1145

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + Q +   A+   +L   E+ R    +
Sbjct: 1146 GLVVQMEARIAELEDRLESEERDRANLQL 1174



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 65/160 (40%), Gaps = 3/160 (1%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +Q L       +    ++NY       +      ++  ++     L+++++      +  
Sbjct: 543 QQELTQQTNEETAKQILYNYLKEGSTDNDDATKRKVNLVFEKIQTLKSRAAGSAQGNNQA 602

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
               + +K+L E+ +    ++ + +R + +  ++ ++NI E++  +R   E     + E 
Sbjct: 603 CNSTSEVKDLLEQKSKLTIEVAELQRQL-QLEVKNQQNIKEERERMRANLEELRSQHNEK 661

Query: 256 ANYLKEISRDLEQNQRTFADEMSKL--TILEKTREQKTIL 293
                 + + LE+++      + +L    +E+ + Q  I 
Sbjct: 662 VEENSTLQQRLEESEGELRKNLEELFQVKMEREQHQTEIR 701


>gi|114707851|ref|ZP_01440744.1| Membrane-fusion protein [Fulvimarina pelagi HTCC2506]
 gi|114536629|gb|EAU39760.1| Membrane-fusion protein [Fulvimarina pelagi HTCC2506]
          Length = 697

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 35/156 (22%)

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           E   + +P +G +    + +   Y +     M I   S +  I A V  K I  + +G  
Sbjct: 171 EYLRVTAPQSGVVTALNA-TDGMYLEPGVRAMSITDLSSVWVI-ADVFEKDIGRLTEGMR 228

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           A  RF        K F+  ++ I P + Q+   L       V L+     F + +  LR 
Sbjct: 229 AEARFEPLP---GKVFEGTVDYIYPELDQKTRTLS------VRLR-----FDNPDQSLRP 274

Query: 408 GF-----------------PAEVLFTAK--NTTLAQ 424
                              P+E +         + +
Sbjct: 275 NMYGRIRLTGALVSEAVTVPSEAVIRTGRAERVILR 310


>gi|94482823|gb|ABF22439.1| coiled-coil transcriptional coactivator [Takifugu rubripes]
          Length = 654

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 72/212 (33%), Gaps = 18/212 (8%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +  +       +      IK++    + E+  ++ L  +   L +A E    ++ +    
Sbjct: 189 VESDISRLQRELKHSHEQIKSMERKQEEEQDLVELLTQEKSTLLEANEESRVRIRELEED 248

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 K            ++    R +     R + E++ S L+A   +  K++  ++ 
Sbjct: 249 I-----KTLTQRTVDRETEMERMKERAKRAGAQRKEEESERSALQAEHEATLKEMRSLQE 303

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
                      LN  ER       +L   + ++      +++   +A  +    L + S 
Sbjct: 304 ----------RLNTSERASEGLKSDLSSMVAQRDRTQSELHQARLQA-AQLTLQLADASL 352

Query: 265 DLEQNQRTFADEMS--KLTILEKTREQKTILS 294
            L + +  +A E    +LT  +     + + +
Sbjct: 353 ALREGRARWAQERQGLQLTAEKDHARLQKLTA 384



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 60/176 (34%), Gaps = 20/176 (11%)

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL---NRLDLENKSSLLR 189
            R E L + L +     +++     ++  +  K KL   R+       R ++E+  S L+
Sbjct: 138 PRAELLQNRLQECLQERAELLQAHEATNRQREKDKLEYKRAREAWDRRRSEVESDISRLQ 197

Query: 190 ALLSSHQKDLTMM-------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIH------- 235
             L    + +  M       ++L E     ++ L +          EL E+I        
Sbjct: 198 RELKHSHEQIKSMERKQEEEQDLVELLTQEKSTLLEANEESRVRIRELEEDIKTLTQRTV 257

Query: 236 EQKNMLRHINELYDEANLEFANYLKE---ISRDLEQNQRTFADEMSKLTILEKTRE 288
           +++  +  + E    A  +      E   +  + E   +       +L   E+  E
Sbjct: 258 DRETEMERMKERAKRAGAQRKEEESERSALQAEHEATLKEMRSLQERLNTSERASE 313


>gi|86140817|ref|ZP_01059376.1| probable HlyD-family secretion protein [Leeuwenhoekiella blandensis
           MED217]
 gi|85832759|gb|EAQ51208.1| probable HlyD-family secretion protein [Leeuwenhoekiella blandensis
           MED217]
          Length = 391

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 84/282 (29%), Gaps = 44/282 (15%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK-YHSTCSKVFN 154
           I  KK  + N +  + TE  +L+   +K DV +KA     E L D L K Y      V  
Sbjct: 36  IRAKKTELVNAQNELKTEIDSLNAAIDKLDVKKKAALVTAETLQDTLFKHYFEVQGNVNT 95

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR-ALLSSHQKDLTMMKNLFEKNAVSQ 213
                +Y      LT++      R+    + + +    L S          L +     Q
Sbjct: 96  DQNIVLYAEYTGVLTQLYVKEGQRVAKGQRLAKIDDGGLGSELARQEAQTALAKTTYERQ 155

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             L  Q+     + LE + N    +     +     +                       
Sbjct: 156 KRLWDQKIGSEINYLEAKTNYEAMQAATDQLRSRVGK----------------------- 192

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP-LMKIVPHSKLTYIRA 332
                             I +P +G IV N            Q  ++++V  S   Y+ A
Sbjct: 193 ----------------TVITAPFSG-IVDNTLADQGQVVNAGQTGVLRLVNLSD-MYVEA 234

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            +    +  V +G    +R        + K + +   + P  
Sbjct: 235 SIPEAFLGKVSEGTDVKIRLASIGKTYDGKIRQVGNFVSPDS 276



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 22/54 (40%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           G++ +  V+ G ++ +G  L   +D      +  ++      +   + +K   D
Sbjct: 107 GVLTQLYVKEGQRVAKGQRLAKIDDGGLGSELARQEAQTALAKTTYERQKRLWD 160


>gi|326436941|gb|EGD82511.1| AGC/DMPK/GEK protein kinase [Salpingoeca sp. ATCC 50818]
          Length = 1740

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 73/228 (32%), Gaps = 28/228 (12%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKS--------------ALDFLNNKYDVLEKAFESREEQ 137
                D  + +    +  + TE                 +  L  +   LE       E+
Sbjct: 540 AETRADEAEHTAATFKAKLATEADNTKTQQEASAAASKEVSKLTLQAQSLESECTELREE 599

Query: 138 LLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           L D   ++             +  +   L    T++R +   +++LE+K    + LL   
Sbjct: 600 LEDLQLQHQQLKKSAGSSKEQVLDLEDKLAHAETQIRQLKRTKVELEDKYDNAKELLVLE 659

Query: 196 QKDL-TMMKNLFEKNAVSQN----------DLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           Q+ +  +   L E  +VS +          +L + E+ + +   +LRE        +  +
Sbjct: 660 QRSVKELTAKLHEAGSVSSSTSKEAEQRTAELREAEQRIAQLQTKLREQNEAHTASISEL 719

Query: 245 NELYDEANLEFANY-LKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +    A      +    + + +EQ +     E  +L    +  +   
Sbjct: 720 EQQLLGAQAAARRHDASAVQKAVEQAREQHQQEKERLLATNQRLQTTV 767



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 75/209 (35%), Gaps = 12/209 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                 E    +D     +   R  +   +++ D L       E+   + + ++   +   
Sbjct: 804  KLAHAELQRDLDRAVREVDASRTSVKELEASNDALRADMQTKEEDITALQAEVERLMVVT 863

Query: 146  HSTCSKVFNYGISS-----VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             +   ++      S     V  +L   + +++       +L+   + + A L S ++   
Sbjct: 864  ETQEQELERLRSQSSAGYDVEDTLAELVQQVKEYEDAHAELDRLKAAVEAELQSLKELRL 923

Query: 201  MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
              K   EK+   Q    + ER      LELR+   E+    +  N+   E N   A    
Sbjct: 924  SPKTFLEKHQRQQRRNQKVER------LELRQLQQERDQEAQAKNQALAELNALRARQEA 977

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQ 289
            E +++L   +       +++ +L + R++
Sbjct: 978  E-AQELIAIRSENKALKNEVNLLAEERDR 1005



 Score = 43.1 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 82/226 (36%), Gaps = 25/226 (11%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH----- 146
           + + +   +  + +    I   K     L +KYD  ++     +  + +   K H     
Sbjct: 617 SKEQVLDLEDKLAHAETQIRQLKRTKVELEDKYDNAKELLVLEQRSVKELTAKLHEAGSV 676

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL------ENKSSLLRALLSSHQKDLT 200
           S+ +       ++  R  + ++ ++++    + +       E +  LL A  ++ + D +
Sbjct: 677 SSSTSKEAEQRTAELREAEQRIAQLQTKLREQNEAHTASISELEQQLLGAQAAARRHDAS 736

Query: 201 MMKNLFEKNAVS----QNDLNQQERIVYKSTLELRENI--------HEQKNMLRHINELY 248
            ++   E+        +  L    + +  +   LRE +         +Q  + + I++L 
Sbjct: 737 AVQKAVEQAREQHQQEKERLLATNQRLQTTVAGLREEVQLAKARSDEQQTVLKQRISQLE 796

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            +          E+ RDL++  R      S+ ++ E       + +
Sbjct: 797 ADMKESSKLAHAELQRDLDRAVREVDA--SRTSVKELEASNDALRA 840


>gi|325135862|gb|EGC58474.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           M0579]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 78/262 (29%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        N    E      +       ++ + +         +
Sbjct: 112 LVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELKALIRQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 172 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 230

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 231 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 287

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 288 SFVP-----NPDGKLATGMTTQ 304


>gi|212635682|ref|YP_002312207.1| membrane-fusion protein [Shewanella piezotolerans WP3]
 gi|212557166|gb|ACJ29620.1| Membrane-fusion protein, putative [Shewanella piezotolerans WP3]
          Length = 388

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 96/284 (33%), Gaps = 27/284 (9%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              +V+ Y I  +           R   L+  +L  + S+  A L +  +DL   K L  
Sbjct: 53  AIRRVWQYQIKMLAPEGSDVSEGDRVAQLDTSELAQRLSVKSANLETTLQDLETSK-LRN 111

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHE-----QKNMLRHINELYDEANLEFANYLKEI 262
              + +  L   E I+ +   +L+ +I +             + +     +   +   E+
Sbjct: 112 AKKLQELKLELAEAIMNQEKSQLKVDISDETVSVIDKKKYQRDAIIATDRVGLIHKKIEL 171

Query: 263 SRDLEQNQRTFADEMSK-----LTILEKTREQKTILSPIAGTIV-----YNQSFSSSNYA 312
                + +    +   +     +  L+K  +  TI++P +G +V          +     
Sbjct: 172 ESLSAEQRVKMLEGDKQKFELEVAALQKGIQSLTIIAPRSGMVVYGNDQQGNKVAEGQNV 231

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                L+ I P  K   +   +   +   VK G    +R        E+ F   I+++  
Sbjct: 232 FNGDTLLSI-PDLKHMQVNMTIPEVEAGRVKVGQKLKIRLDA---NPERSFNGEIKELGA 287

Query: 373 IISQQDNNLQTQEY-YEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +   ++ ++    +     ++ TD         +R G  A++  
Sbjct: 288 VFRVKNQDVPLVIFDAVASIQETDTEL------MRPGMTAKISI 325


>gi|254472299|ref|ZP_05085699.1| transporter, MFP family [Pseudovibrio sp. JE062]
 gi|211958582|gb|EEA93782.1| transporter, MFP family [Pseudovibrio sp. JE062]
          Length = 410

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 1/148 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    VEN  Q+  G  L T +       +D  +  +  +   I    S L       
Sbjct: 83  GRVDLVMVENNQQVKAGQLLFTLDSSTEKAQVDTAQSEVDEIDAEIALANSELISAEAMI 142

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              + A+     +L   L         V    I +    + ++  ++ +   NR  ++ K
Sbjct: 143 SQAQGAYNQAVSELERTLDLQRRNSDVVTQKEIDTRENQVVVRKGQLDAAVANRDIVQTK 202

Query: 185 SS-LLRALLSSHQKDLTMMKNLFEKNAV 211
            +  L A  +S    L   ++ + K  V
Sbjct: 203 ITVSLPAQRTSAIARLHQAESAYHKKFV 230


>gi|325200764|gb|ADY96219.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           H44/76]
          Length = 388

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 39  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 97

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 98  KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELK 157

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 158 ALIRQSKISINTAES 172



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 78/262 (29%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 56  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 107

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        N    E      +       ++ + +         +
Sbjct: 108 LVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELKALIRQSKISI 167

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 168 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 226

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 227 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 283

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 284 SFVP-----NPDGKLSTGMTTQ 300


>gi|322648251|gb|EFY44711.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
          Length = 159

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 22/67 (32%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + I   V   G I  +DN   I     G I+   V  G  + +G  L    +++    
Sbjct: 25  YFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNLDLQKE 84

Query: 96  IDLKKVS 102
               +  
Sbjct: 85  YQRYRTQ 91


>gi|319409926|emb|CBY90251.1| putative membrane fusion protein [Neisseria meningitidis WUE 2594]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 78/262 (29%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        N    E      +       ++ + +         +
Sbjct: 112 LVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELKALIRQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 172 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 230

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 231 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 287

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 288 SFVP-----NPDGKLATGMTTQ 304


>gi|295688754|ref|YP_003592447.1| HlyD family protein [Caulobacter segnis ATCC 21756]
 gi|295430657|gb|ADG09829.1| secretion protein HlyD family protein [Caulobacter segnis ATCC
           21756]
          Length = 334

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 53/151 (35%), Gaps = 10/151 (6%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT--------- 93
           +  + G+   E  V+++ +   GI++   V+ G  +  G PL   ED +           
Sbjct: 51  AAIAQGKADVEGGVIQVAARRQGIVRDVFVQEGDIVKAGQPLAKQEDDDARLAAQTASAA 110

Query: 94  DLIDLKKVSIKNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                 ++ +  ++      E + L  L     V  +  ++  +++ +      +  + +
Sbjct: 111 LASARAQLQLYQVQLRTAQREHARLQGLTASNFVAAQRLDAARDKIAEAQANIGAQQAAI 170

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                     +   +LT +R+    R+    
Sbjct: 171 SVASAQLAQANYNQELTIIRAPADGRIARRQ 201


>gi|194367781|ref|YP_002030391.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194350585|gb|ACF53708.1| secretion protein HlyD family protein [Stenotrophomonas maltophilia
           R551-3]
          Length = 305

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 69/225 (30%), Gaps = 27/225 (12%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V +            S  E + ++ + +  +     L D    E A   +   +     
Sbjct: 77  VVDRARYRIALEQAKASLGERQASVAQLRREIGRDRSLQDLVAAEDAEVRRAKLQA---A 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   A   + + + E    +  + +P  G +   ++    +Y    +P++ ++  +    
Sbjct: 134 QAALATAQAAVDLAELNLSRTEVRAPADGRVND-RTMRVGDYVVAGKPVLALL-DTGSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID---------------PII 374
           I       +++ V  G    +R            +  +E I                P +
Sbjct: 192 IDGYFEETRLRGVAPGQRVDIRL----MGESTPLRGHVESIAAGIEDRYRSNGSTLLPNV 247

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +   + ++  +   V + I ++      +EL  G  A V      
Sbjct: 248 TPAFDWVRLAQRIPVRIAIDEV---PKGVELIAGRTATVTVDTGR 289



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 31/79 (39%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV++    SG+++  QV +   + +G  L   +       ++  K S+   +  + 
Sbjct: 43  VGADVVQVAPDVSGLVETVQVADNQAVKKGDLLFVVDRARYRIALEQAKASLGERQASVA 102

Query: 112 TEKSALDFLNNKYDVLEKA 130
             +  +    +  D++   
Sbjct: 103 QLRREIGRDRSLQDLVAAE 121


>gi|161869478|ref|YP_001598645.1| HlyD family secretion protein [Neisseria meningitidis 053442]
 gi|161595031|gb|ABX72691.1| HlyD family secretion protein [Neisseria meningitidis 053442]
 gi|325139799|gb|EGC62332.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           CU385]
 gi|325141772|gb|EGC64223.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           961-5945]
 gi|325197760|gb|ADY93216.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           G2136]
 gi|325202663|gb|ADY98117.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           M01-240149]
 gi|325203639|gb|ADY99092.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           M01-240355]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 78/262 (29%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        N    E      +       ++ + +         +
Sbjct: 112 LVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELKALIRQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 172 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 230

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 231 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 287

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 288 SFVP-----NPDGKLATGMTTQ 304


>gi|34557767|ref|NP_907582.1| periplasmic component of efflux system [Wolinella succinogenes DSM
           1740]
 gi|34483484|emb|CAE10482.1| PERIPLASMIC COMPONENT OF EFFLUX SYSTEM [Wolinella succinogenes]
          Length = 364

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 55/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE  VS++G I   + V ++ +  SG +++  V+ G  + +G  L   +       +D  
Sbjct: 21  IENLVSATGTIQPREYV-DVGAQVSGQLRRIHVQVGDYVKEGDLLAEIDVTVYKAKVDAS 79

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +K  +     +++ L      Y   +  +ES    L  +     +  S +    +  
Sbjct: 80  RAQLKYQKAQKIDKEAQLVLAELNYRRQKGLYESDATSLESYQSAEATWKSSL--AQLEM 137

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   ++   + +R+   N
Sbjct: 138 IKAQIEQLESTLRADEAN 155



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 5/140 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q    + ++I  ++ L L E  + ++  L   +    E+        K     LE  + 
Sbjct: 81  AQLKYQKAQKIDKEAQLVLAELNYRRQKGLYESDATSLESYQSAEATWKSSLAQLEMIKA 140

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLT 328
                 S L   E       I +P+ GTIV   +         +Q    +++I     + 
Sbjct: 141 QIEQLESTLRADEANLNYTQIYAPMTGTIVSITAR-QGQTLNTNQQAPTILRIA-DLSVM 198

Query: 329 YIRAKVTPKQIQHVKKGYTA 348
            I+A+V+   +  ++KG   
Sbjct: 199 TIKAQVSEADVNRLRKGMGV 218


>gi|90423374|ref|YP_531744.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90105388|gb|ABD87425.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 405

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 54/141 (38%), Gaps = 3/141 (2%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           +  IE +V +SG +     +V + +  SG +   +V+ G ++ QG  +   + +   + +
Sbjct: 42  VADIEETVLASGTLKPI-KMVAVGAQVSGRVLSLKVKIGDKVKQGDLIAQIDPVTRQNDL 100

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              + +++N+      +++ L          +  F  +     DF         K     
Sbjct: 101 RTSEAALQNMHAQRAEKEATLALAEASLARHQLTFAQKATSRADF--DTADATVKQTRAQ 158

Query: 157 ISSVYRSLKMKLTRMRSIYLN 177
           I+++   +      + +  +N
Sbjct: 159 IAALDAQITEAQVSVENARVN 179



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 12/150 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY---------LK 260
              QNDL   E  +     +  E           +         +  +          +K
Sbjct: 94  VTRQNDLRTSEAALQNMHAQRAEKEATLALAEASLARHQLTFAQKATSRADFDTADATVK 153

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PL 318
           +    +        +    +       +   I++PI GT++              Q  P 
Sbjct: 154 QTRAQIAALDAQITEAQVSVENARVNLDYTRIIAPIDGTVLSV-VTQEGQTVNAVQSAPT 212

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + I+   +L  IRA+++   +  V+ G   
Sbjct: 213 IVILGQVELMTIRAEISEVDVIKVRPGQEV 242


>gi|328544345|ref|YP_004304454.1| Efflux transporter RND family, MFP subunit [polymorphum gilvum
           SL003B-26A1]
 gi|326414087|gb|ADZ71150.1| Efflux transporter, RND family, MFP subunit [Polymorphum gilvum
           SL003B-26A1]
          Length = 367

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 13/228 (5%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
              +    R   + + RL  E ++S+L    S+  +    ++       V++  + +  R
Sbjct: 43  ERQEQAGDRPFRVKVARLVAEERNSVLTVRGSTQAEAKVAVRAETA-GRVAERPVREGAR 101

Query: 222 IVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKE----ISRDLEQNQRTFADE 276
           +    TL  L     E   +     E     + E A  L          +   +      
Sbjct: 102 VAAGDTLCVLDRGAREAGVLEATAAEAQARLDYEAARQLNAKGFAAETRVAALRAAHDAT 161

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            ++L   E   E+  I +PI G +    ++   ++ +   P   +V  S       +V+ 
Sbjct: 162 KARLHEAELELERTIIRAPIGGIVESPMAY-VGDHLKIGDPCGTVV-DSDPMIAIGQVSE 219

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
             I  +  G  A V       +        +  I P  +      + +
Sbjct: 220 LSIGLIAPGMPAEV-----DLVDGTTLSGSVRYIAPSANPDTRTFRIE 262



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 35/104 (33%), Gaps = 4/104 (3%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            V +++  +G + +  V  G+++  G  L   +         + + +    +  +D E +
Sbjct: 80  KVAVRAETAGRVAERPVREGARVAAGDTLCVLD--RGAREAGVLEATAAEAQARLDYEAA 137

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
               LN K    E    +          + H    ++    I +
Sbjct: 138 R--QLNAKGFAAETRVAALRAAHDATKARLHEAELELERTIIRA 179


>gi|302343078|ref|YP_003807607.1| efflux transporter, RND family, MFP subunit [Desulfarculus baarsii
           DSM 2075]
 gi|301639691|gb|ADK85013.1| efflux transporter, RND family, MFP subunit [Desulfarculus baarsii
           DSM 2075]
          Length = 447

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 68/232 (29%), Gaps = 17/232 (7%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +L +A ++  Q  +   K   +        L  + R   +     R+    +       +
Sbjct: 101 ALYQASVTEAQAQVAASKASLQSARADLEQLKAKFRQAERDWQRARKLGPSEAISQASFD 160

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                     AN        + Q + + A   + L   ++  +  TI SP+ G I+  + 
Sbjct: 161 SYQSAFEAAKANVTV-GEAAILQAKASLAQAEAALWRAQRNLDYCTITSPVKGVIIDRRV 219

Query: 306 FSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                    S     L  I        +   V    I  +  G   +     +       
Sbjct: 220 D-IGQTVNSSMSAPSLFLIAKDLTKMELWVAVNEADIGSIHPGQKVSFTVDAFPGH---D 275

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           F   + K+    S   N +     Y V ++       +++ +L     A VL
Sbjct: 276 FSGQVGKLRLNASMTQNVVS----YTVEVQTD-----NSDGKLLPYLTANVL 318



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 69/200 (34%), Gaps = 33/200 (16%)

Query: 15  ASLKRMTLLSIIGIIGLIT--WSILLPIEISVS-----------------SSGEILNEDN 55
             L ++   +  G+  L+   W+   P + + +                 ++G +  E +
Sbjct: 2   KRLTKIIGATAGGVAALLGALWA-FSPDDQAAAPFRTARVTKGDLVSTIEATGTLEPE-D 59

Query: 56  VVEIKSPFSGIIKKFQVE-NG------SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
           V+++ +   G I  F V+ NG      S +  G  L   +D      +   +  +   + 
Sbjct: 60  VIDVGAQVGGKIISFGVDANGKPIDYSSPVEAGMVLAKIDDALYQASVTEAQAQVAASKA 119

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            + + ++ L+ L  K+   E     R+ Q    LG   +     F+   S+   +     
Sbjct: 120 SLQSARADLEQLKAKFRQAE-----RDWQRARKLGPSEAISQASFDSYQSAFEAAKANVT 174

Query: 169 TRMRSIYLNRLDLENKSSLL 188
               +I   +  L    + L
Sbjct: 175 VGEAAILQAKASLAQAEAAL 194


>gi|114213580|gb|ABI54348.1| Abnormal dye filling protein 14, isoform c, partially confirmed by
            transcript evidence [Caenorhabditis elegans]
          Length = 1898

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 76/199 (38%), Gaps = 10/199 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK-------- 144
             +    ++  I++++  I T +  L    +K   L K  E    QL D L          
Sbjct: 1402 EESSRSREHEIRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHDALESKEKATGLV 1461

Query: 145  -YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +  +     +    R  ++ + + R       +L  K   L        +++T  +
Sbjct: 1462 GVQDSKHRDLEEQLDRANRERELAIGKQRRTLAENENLFRKLEQLEKEREQLMREITDER 1521

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+N  S  +L   ER    +    ++   EQ+  ++     ++E+N E  N    ++
Sbjct: 1522 RLNERNRTSLEELRVSERTWKSAMTTAKKPAEEQERAVQE-QRRWEESNHEMTNRNTALT 1580

Query: 264  RDLEQNQRTFADEMSKLTI 282
            ++ ++ +    D+++++  
Sbjct: 1581 KECDRLRVEMRDQLNRMNG 1599



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 73  ENGSQILQGTPLLTFEDIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
               + L+G       D++   L +D+ +     L+  ++TE+   D  + +        
Sbjct: 500 RETQRSLKGDVAAMKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECRAKL 559

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +   E+  +   +     + +                S     T    I     ++ENK+
Sbjct: 560 DEMAEKEAELRKELAEFQAIITAMEGEGKLNQEQFLESKNELNTLTDQIESLNSEVENKN 619

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLR 242
             +R L+++ Q+    ++N+   +        +    +     E   L E ++E+   + 
Sbjct: 620 EEIRNLMATLQEKEVHIQNVRTSSHQLTATYEEANGEIDILKAELTRLHEQVNERTRQIS 679

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             NE YD+A  +    L++++   ++       E+ ++    + +E++ 
Sbjct: 680 EANEKYDDAARKNDALLEDVAT-WQEKYEQLKMELEEMNRRGQEKEREE 727



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 68/208 (32%), Gaps = 14/208 (6%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH---------S 147
           +  +      R   + E+S  + +  + D L +   S +  +                  
Sbjct: 469 EALRSKDTEERSRFEKERSEREKIRRESDELRETQRSLKGDVAAMKTDLDDKTLRLDMLE 528

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---N 204
           T        + +       +   +        ++  K + LR  L+  Q  +T M+    
Sbjct: 529 TERDELKKKLETEREQADQRDLEIAECRAKLDEMAEKEAELRKELAEFQAIITAMEGEGK 588

Query: 205 LFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           L ++  + S+N+LN     +     E+     E +N++  + E              +++
Sbjct: 589 LNQEQFLESKNELNTLTDQIESLNSEVENKNEEIRNLMATLQEKEVHIQN-VRTSSHQLT 647

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
              E+         ++LT L +   ++T
Sbjct: 648 ATYEEANGEIDILKAELTRLHEQVNERT 675


>gi|38704003|ref|NP_310380.2| hypothetical protein ECs2353 [Escherichia coli O157:H7 str. Sakai]
 gi|168752343|ref|ZP_02777365.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4113]
 gi|168759142|ref|ZP_02784149.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4401]
 gi|168765152|ref|ZP_02790159.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4501]
 gi|168771188|ref|ZP_02796195.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4486]
 gi|168775876|ref|ZP_02800883.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4196]
 gi|168783916|ref|ZP_02808923.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4076]
 gi|168789483|ref|ZP_02814490.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC869]
 gi|195940207|ref|ZP_03085589.1| hypothetical protein EscherichcoliO157_28076 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208810460|ref|ZP_03252336.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4206]
 gi|208816585|ref|ZP_03257705.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4045]
 gi|208819137|ref|ZP_03259457.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4042]
 gi|209400309|ref|YP_002270714.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4115]
 gi|217328634|ref|ZP_03444715.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. TW14588]
 gi|254793261|ref|YP_003078098.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O157:H7
           str. TW14359]
 gi|261227910|ref|ZP_05942191.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261258356|ref|ZP_05950889.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O157:H7
           str. FRIK966]
 gi|187768652|gb|EDU32496.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4196]
 gi|188013804|gb|EDU51926.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4113]
 gi|188998808|gb|EDU67794.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4076]
 gi|189354239|gb|EDU72658.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4401]
 gi|189359984|gb|EDU78403.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4486]
 gi|189365000|gb|EDU83416.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4501]
 gi|189370951|gb|EDU89367.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC869]
 gi|208724976|gb|EDZ74683.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4206]
 gi|208730928|gb|EDZ79617.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4045]
 gi|208739260|gb|EDZ86942.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4042]
 gi|209161709|gb|ACI39142.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. EC4115]
 gi|217317981|gb|EEC26408.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli O157:H7 str. TW14588]
 gi|254592661|gb|ACT72022.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O157:H7
           str. TW14359]
 gi|320188331|gb|EFW62993.1| Putative membrane protein [Escherichia coli O157:H7 str. EC1212]
 gi|320641999|gb|EFX11363.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O157:H7
           str. G5101]
 gi|320647316|gb|EFX16124.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O157:H-
           str. 493-89]
 gi|320652610|gb|EFX20879.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O157:H-
           str. H 2687]
 gi|320652996|gb|EFX21192.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320658679|gb|EFX26356.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320668669|gb|EFX35474.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O157:H7
           str. LSU-61]
 gi|326342011|gb|EGD65792.1| Putative membrane protein [Escherichia coli O157:H7 str. 1044]
 gi|326343562|gb|EGD67324.1| Putative membrane protein [Escherichia coli O157:H7 str. 1125]
 gi|332090780|gb|EGI95872.1| hypothetical protein SB521682_1784 [Shigella boydii 5216-82]
          Length = 285

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 59  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 117

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 118 AEELDTANLNVKAMQASVDAAQATLKQTQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 176

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 177 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 227

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 228 RAIYDQS 234



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVDAAQATLKQTQWQLAQTEIRA 156


>gi|78189171|ref|YP_379509.1| secretion protein HlyD [Chlorobium chlorochromatii CaD3]
 gi|78171370|gb|ABB28466.1| Secretion protein HlyD [Chlorobium chlorochromatii CaD3]
          Length = 395

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 61/189 (32%), Gaps = 13/189 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G++  E           G+++   ++ G+ +  G PL   +D            S    
Sbjct: 62  EGKVTVEIRPQV-----DGVLRSILIDEGAFVKAGQPLFAIDDAVYRAQYQGALASQHAA 116

Query: 107 RCHIDTEKSALDFLN---NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +   K  ++ L        + E   E+           +    +   +  ++  Y  
Sbjct: 117 EARVVAAKLEVERLQPLVQNQVIAEVQLETARANYKAAQAAFDVAVAATRSAKVNLDYTV 176

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +K  +         R     + SL+    ++    L+ +  ++   ++S+N+L +  +  
Sbjct: 177 IKAPINGFVGKITLR-----QGSLVTKNQAAWLTMLSDVSEVYASFSISENELLRFRQQY 231

Query: 224 YKSTLELRE 232
            +S   L  
Sbjct: 232 GQSDGRLGS 240


>gi|86134743|ref|ZP_01053325.1| efflux transporter, RND family, MFP subunit [Polaribacter sp.
           MED152]
 gi|85821606|gb|EAQ42753.1| efflux transporter, RND family, MFP subunit [Polaribacter sp.
           MED152]
          Length = 389

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 75/224 (33%), Gaps = 13/224 (5%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRS----LKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           +  LD   +  S   K  N  I ++       L   +T    ++ + L+L+      + +
Sbjct: 41  KAELDQKVQALSNDIKKLNTEIEALDTIKRVPLVTAITIKNEVFTHFLELQGNVKTKQNV 100

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L   +   T+   L ++       + + + +       L + + + +     + +   E 
Sbjct: 101 LIYPEMPGTLETVLVKEG----QKVYKGQVLARIDDGGLAQQVAQLEATTA-LAKTTYER 155

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             +  N          Q +  +    S+L  L+K   + TI +P AG I  N        
Sbjct: 156 QEKLWNQKIGSEIQFLQTKTNYEATKSQLAQLKKQLGKSTIRAPFAGVI-DNVFKDQGTV 214

Query: 312 AQ--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
                   + +IV      +I A V    I  +  G    + FP
Sbjct: 215 VSPGPGSEVFRIVNLGN-MFIEADVPESYISDIVPGKEVEIEFP 257



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 36/114 (31%), Gaps = 16/114 (14%)

Query: 50  ILNEDNVVEIKS----PF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +  + NV   ++    P   G ++   V+ G ++ +G  L   +D             + 
Sbjct: 88  LELQGNVKTKQNVLIYPEMPGTLETVLVKEGQKVYKGQVLARIDD-----------GGLA 136

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                ++   +       + + L       E Q L     Y +T S++      
Sbjct: 137 QQVAQLEATTALAKTTYERQEKLWNQKIGSEIQFLQTKTNYEATKSQLAQLKKQ 190


>gi|323495464|ref|ZP_08100541.1| membrane-fusion protein [Vibrio brasiliensis LMG 20546]
 gi|323310387|gb|EGA63574.1| membrane-fusion protein [Vibrio brasiliensis LMG 20546]
          Length = 356

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 22/208 (10%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           AV  N + +Q +++ +   +       +        +   +              +++  
Sbjct: 73  AVKANQVVEQGQLIIQLNDDKARASVAEAKAYLKDEQRKLKEFERLVKRNAITQTEIDAQ 132

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           + +     ++L       +   I +P  GT+     FS        + L+ +        
Sbjct: 133 KASVEIAQARLDAANANLKDLHITAPFDGTV-GFIDFSRGKMVTAGEDLLTL----DNLS 187

Query: 330 I---RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
           +     +V  + +  + KG   T     + D   K F   +  ID  I+Q+  NL     
Sbjct: 188 VMQMDLQVPERYLSQLSKGMKVTATTAAWPD---KVFDGEVVAIDSRINQETLNL----- 239

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVL 414
             V +  T+ A      +L+ G      
Sbjct: 240 -RVRIHFTNSA-----NDLKPGMLVSAD 261



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 48/120 (40%), Gaps = 5/120 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  S+   G++  E +V EI    +G +    V+    + QG  ++   D +    +   
Sbjct: 43  VSQSLVLVGKLDAEQSV-EISPEVAGKVDTIAVKANQVVEQGQLIIQLNDDKARASVAEA 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +K+ +  +       + L  +  + +   ++++  +     +  +  + + +  I++
Sbjct: 102 KAYLKDEQRKLK----EFERLVKRNAITQTEIDAQKASVEIAQARLDAANANLKDLHITA 157


>gi|300115482|ref|YP_003762057.1| RND family efflux transporter MFP subunit [Nitrosococcus watsonii
           C-113]
 gi|299541419|gb|ADJ29736.1| efflux transporter, RND family, MFP subunit [Nitrosococcus watsonii
           C-113]
          Length = 365

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 23/198 (11%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L Q E  V +   +L+  + EQK     + EL  + N              +++Q    +
Sbjct: 96  LLQLEDSVDQ--ADLKGLLAEQK-----LAELQFQRNTRLLKKQMVSRSVYDESQAQLEN 148

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             + +        +K I +P +G  +  +      Y      ++ ++      Y+   + 
Sbjct: 149 AQAMVAAKRALIRKKQIRAPFSGL-LGIRQVDLGEYLAPGSSIV-LLQALDPIYVDYSLP 206

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            +    + +G T  +    Y     + FK  I  I+P ++    N        V ++ T 
Sbjct: 207 ERYFSLLAQGQTVLITVQAYP---TQHFKGRITAINPGVNPSSRN--------VQVRAT- 254

Query: 396 LAFSDNNIELRNGFPAEV 413
             F + N +LR G  AEV
Sbjct: 255 --FENPNFKLRPGMFAEV 270


>gi|237723653|ref|ZP_04554134.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229438001|gb|EEO48078.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 416

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 107/314 (34%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTCSK 151
           TD I + +V       ++D E      L  K +  E     R   +  + + +  +    
Sbjct: 45  TDNIQIAEVKDDKFMEYVDVEGLVQPILTIKVNTREGGSVDRIVGEEGNMMKQGDTLLIL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                I S+         +  +     +++E KS  L+      Q ++  ++        
Sbjct: 105 TNPDLIRSIEDQRDEWEKQRITYKEKEIEMEQKSLTLKQQTLQAQYEMERLR-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        +    + E +   +  N      +L+  + +  I ++L   + 
Sbjct: 157 -KSFGLDKEEFKMGIKSKAELQVSEDEYKYKLKNTALQMESLKHDSSVTLIRKEL--LRN 213

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  KL   E+  E   + +PI G + + +  +        + + +I        I 
Sbjct: 214 DLERESKKLKRAEERLEDLIVKAPIGGQLSFVKV-TPGQQVASGESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPI-ISQQDNNLQTQE 385
           A ++   I  +  G  ATV +    Y     K    + ++   +D +   +   N++  +
Sbjct: 272 ASLSEYYIDRITTGLPATVNYQGKRYPLKITKVVPEVKDRMFDVDLVFTGEMPENVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEQA 345


>gi|21233334|ref|NP_639251.1| acriflavin resistance protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66770296|ref|YP_245058.1| acriflavin resistance protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|21115167|gb|AAM43133.1| acriflavin resistance protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575628|gb|AAY51038.1| acriflavin resistance protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 379

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 50/126 (39%), Gaps = 3/126 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +    +  + +  +G +++  +E G ++ +G  + T + ++      L    +   R  +
Sbjct: 45  VVARRMATVSAQVTGKVREVMIEEGMRVEEGQVMATLDPLDADAQRTLSASQLSAARSQV 104

Query: 111 DTEKSALDFLNNKYDVLEKAFESR---EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           D  ++ L   N     L+    ++     Q      +  +  +++ N   +    S ++ 
Sbjct: 105 DNMQAQLAVANADASRLQSLVGAQLVSRSQYEQATAQRDALRAQLQNAQRNVQVASNQLA 164

Query: 168 LTRMRS 173
           ++ +RS
Sbjct: 165 ISAIRS 170



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 80/272 (29%), Gaps = 38/272 (13%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V    +++V   +  K+  +      R++     + L  L +  Q+ L            
Sbjct: 45  VVARRMATVSAQVTGKVREVMIEEGMRVEEGQVMATLDPLDADAQRTL------------ 92

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFANYLKE-ISRDLEQN 269
           S + L+     V     +L     +   +   +  +L   +  E A   ++ +   L+  
Sbjct: 93  SASQLSAARSQVDNMQAQLAVANADASRLQSLVGAQLVSRSQYEQATAQRDALRAQLQNA 152

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--------LMKI 321
           QR      ++L I     +   + +P AG +V  ++                    +  I
Sbjct: 153 QRNVQVASNQLAISAIRSDFNVVRAPFAG-VVTAKAAQPGEIVSPLSAGGGFTRTGIGTI 211

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V   +   I  +V    I  V+           Y + +       +  I P   +     
Sbjct: 212 V-DMESLEIEVEVGESYIGRVQPKMPVEAVLNAYPEWK---IPGEVIAIIPTADRGKAT- 266

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                  V +++   A    +  +       V
Sbjct: 267 -------VKVRV---ALKVKDPRIVPEMGVRV 288


>gi|325129700|gb|EGC52513.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           OX99.30304]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 79/262 (30%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        N    E      +       ++ + +         +
Sbjct: 112 LVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELKALIRQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 172 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 230

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 231 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 287

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      +++ +L  G   +
Sbjct: 288 SFVP-----NSDGKLATGMTTQ 304


>gi|315054199|ref|XP_003176474.1| calmodulin-binding coil-coil protein [Arthroderma gypseum CBS
           118893]
 gi|311338320|gb|EFQ97522.1| calmodulin-binding coil-coil protein [Arthroderma gypseum CBS
           118893]
          Length = 1259

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 79/204 (38%), Gaps = 6/204 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              I   +  +++ R  I+  + +L+    + +  E A E   ++             ++
Sbjct: 352 NANIADLETELEDARGKIEDLQDSLERARAEAEDAETACEQALQEKEQAAEDLRELQDEM 411

Query: 153 FNYGISS--VYRSLKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            N  IS+  + R L+ +  ++   +   R         L       ++    +K+L +++
Sbjct: 412 ANKSISASGLTRQLEERANKLETELTTVRQQHATLQEKLENKAQFERRLQEQIKDLKQEH 471

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           + ++ +L   ++       ++   I+ +  +   I +L  E +   ++   ++ +   + 
Sbjct: 472 SSTERELIFLQKEHAGCQGDIEGKINSENRLQERIEDLKQELSSTRSDLQHDLEQARHEK 531

Query: 270 QRTFADE---MSKLTILEKTREQK 290
                ++   +S+L  LE   +QK
Sbjct: 532 AIAIREQKSALSRLQSLEDELQQK 555



 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 64/201 (31%), Gaps = 4/201 (1%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +T  L+  +  ++ N    +  +         + +    A        L+ + + H    
Sbjct: 557 DTKSLLQTRHDALTNESKALQGDLDRAKRTIAELEEDAAAERQESLNTLEEMRRRHKDEI 616

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR----ALLSSHQKDLTMMKNLF 206
              N  I+ + R +  K +   S      +++    L R        +H++ +  ++ + 
Sbjct: 617 DQLNLQITVLRREVDNKNSLFNSDLDKWENIKRSLELERDRALQQAEAHKRTVDSLQQME 676

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              +  +  L        +  L+  E +  Q   L        EA+    + L  +   L
Sbjct: 677 TTKSGREKRLQDIIDSEKQRRLQQEELLTRQIKELNDDISSRREASETQRSELLSLKEQL 736

Query: 267 EQNQRTFADEMSKLTILEKTR 287
             ++R       K+  LE   
Sbjct: 737 RVSRREEQTLKEKVQGLEDEI 757


>gi|268592814|ref|ZP_06127035.1| secretion protein, HlyD family [Providencia rettgeri DSM 1131]
 gi|291311598|gb|EFE52051.1| secretion protein, HlyD family [Providencia rettgeri DSM 1131]
          Length = 323

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 98/292 (33%), Gaps = 36/292 (12%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +E+  + ++ QLL    +     ++      +      +++L+   +      DL+   +
Sbjct: 55  IERGDDVKQGQLL-LTLESPELQAQYAASKAARDQAKAQLELSINGTREETIRDLQATLA 113

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              +   +  ++   + NL  K  VS N+L+   +    +  +++        +   ++ 
Sbjct: 114 QANSQYQNASREYARLSNLKNKGYVSANELDNARKAKEVAFSQVQGAKA---RLEEGLHG 170

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              E   ++   L +  + L + Q    D                + +P+ G +    + 
Sbjct: 171 DRIELRQQYEAALDQAEQKLAELQVQVDDL--------------QVKAPVDGEVGPIPA- 215

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFPHYADIREKKFKA 365
                     PL+ ++   +  ++      + I   VKKG    +  P   +   K  +A
Sbjct: 216 EIGELFNAGSPLVSLIRLPQAYFV--YNLREDILVDVKKGDKVQLDIPALGN---KVVEA 270

Query: 366 IIEKIDP--IISQQDNNLQTQEY----YEVILKITDLAFSDNNIELRNGFPA 411
            I  I P    + +     T ++    +E+ L   +         LR G   
Sbjct: 271 EIRYIAPKGDYATKRATRATGDFDLKTFEIRLYPVEPIEG-----LRPGMSV 317


>gi|124025491|ref|YP_001014607.1| ABC transporter [Prochlorococcus marinus str. NATL1A]
 gi|123960559|gb|ABM75342.1| possible ABC transporter component [Prochlorococcus marinus str.
           NATL1A]
          Length = 305

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 59/206 (28%), Gaps = 27/206 (13%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + E  +  +   L   + E +   R IN  +   E        L ++  DL  ++     
Sbjct: 105 KLEANLKSAQANLNILMSEIRIKKREINRYQTLLEKGAVAEIVLDKMKDDLFISETKILK 164

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSF-----SSSNYAQQSQ-PLMKIVPHSKLTY 329
             + +  +    EQ  + SPI G ++          +SS         LM+         
Sbjct: 165 LKAAIDAINVDLEQTQLKSPIDGIVLQVLVREGERPNSSGVINVGANQLME-------AL 217

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP------IISQQDNNLQT 383
           I    +   I  V+ G                     +  I P      ++S        
Sbjct: 218 IEVYES--DIDRVQMGQAVD--LISENGGFNGSLSGQVTLISPQVRQRRVLSTDPTGDAD 273

Query: 384 QEYYEVILKITDLAFSDNNIELRNGF 409
               EV +K+ + +     +    G 
Sbjct: 274 SRVVEVRVKLDNSSAKK--VSHLTGM 297



 Score = 43.1 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 85/248 (34%), Gaps = 18/248 (7%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSG-----IIKKFQVENGSQILQGTPLLTFEDI-ETTDL 95
             V++ G++     V ++ +P SG      + K  +  G  I++   L  F++  +    
Sbjct: 50  EGVAALGQLNPLGEVRKLAAPNSGKGGTPRLSKLLIREGDYIIKDQILAVFDNRPKLEAN 109

Query: 96  IDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +   + ++  L   I  +K  +     L  K  V E   +  ++ L     K     + +
Sbjct: 110 LKSAQANLNILMSEIRIKKREINRYQTLLEKGAVAEIVLDKMKDDLFISETKILKLKAAI 169

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               +      LK  +  +    L R      SS +  + ++      +M+ L E   V 
Sbjct: 170 DAINVDLEQTQLKSPIDGIVLQVLVREGERPNSSGVINVGANQ-----LMEALIE---VY 221

Query: 213 QNDLNQQE-RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++D+++ +         E           +  I+    +  +   +   +    + + + 
Sbjct: 222 ESDIDRVQMGQAVDLISENGGFNGSLSGQVTLISPQVRQRRVLSTDPTGDADSRVVEVRV 281

Query: 272 TFADEMSK 279
              +  +K
Sbjct: 282 KLDNSSAK 289


>gi|148556607|ref|YP_001264189.1| hypothetical protein Swit_3705 [Sphingomonas wittichii RW1]
 gi|148501797|gb|ABQ70051.1| secretion protein HlyD family protein [Sphingomonas wittichii RW1]
          Length = 343

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 91/304 (29%), Gaps = 28/304 (9%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           L  +           E   ++   +     ++ F  G+++   S+ +    +  +     
Sbjct: 53  LAFRQPGRVAQMHFDEGDHVEAGARMAVLDAQPFEEGVAAADASVGVAQADLDKLLRGLR 112

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             E   +             + +    E+N   Q+ L        K+    R    +   
Sbjct: 113 PQEIVQA------REALNQASAVARDAERNFNRQSQLLASGAASQKTVDAARTARDQAVA 166

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                   Y +A   F         D+   Q   A   +             +L+P  GT
Sbjct: 167 GANAARAAYSQATEGFRK------EDVAAGQARLAAAQAARAQAATALADTVLLAPRTGT 220

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           ++  +     +      P+   V      Y+RA +    +  +  G    V     +D  
Sbjct: 221 VIA-RVREPGSMVVSQTPI-YSVSLDAPVYVRAYIGEPDLGRIAPGMRVRVH----SDSS 274

Query: 360 EKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           +K ++  I  I P       + +  +L+T   Y + + +T     + +  LR G P  + 
Sbjct: 275 DKVYQGQIGFISPRAEFTPKTVETTDLRTDLVYRLRIVVT-----NADAALRQGMPVTID 329

Query: 415 FTAK 418
             A 
Sbjct: 330 VDAG 333



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 55/164 (33%), Gaps = 12/164 (7%)

Query: 14  PASLKRMTLLSIIGIIGLITWSIL---LPIEISVSSSGEILNEDNVVEIK--SPFSGIIK 68
           P   KR+ ++  +  I  I W  +      + ++   G +    ++ E++      G + 
Sbjct: 7   PGIPKRVFIIVAVVAIIGIGWVWMQRGSHDDEALRLYGNV----DIREVQLAFRQPGRVA 62

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +   + G  +  G  +   +     + +     S+   +  +D     L     +  V  
Sbjct: 63  QMHFDEGDHVEAGARMAVLDAQPFEEGVAAADASVGVAQADLDKLLRGL---RPQEIVQA 119

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           +   ++   +     +  +  S++   G +S       +  R +
Sbjct: 120 REALNQASAVARDAERNFNRQSQLLASGAASQKTVDAARTARDQ 163


>gi|114213579|gb|ABI54347.1| Abnormal dye filling protein 14, isoform b, partially confirmed by
            transcript evidence [Caenorhabditis elegans]
          Length = 1911

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 76/199 (38%), Gaps = 10/199 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK-------- 144
             +    ++  I++++  I T +  L    +K   L K  E    QL D L          
Sbjct: 1402 EESSRSREHEIRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHDALESKEKATGLV 1461

Query: 145  -YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +  +     +    R  ++ + + R       +L  K   L        +++T  +
Sbjct: 1462 GVQDSKHRDLEEQLDRANRERELAIGKQRRTLAENENLFRKLEQLEKEREQLMREITDER 1521

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+N  S  +L   ER    +    ++   EQ+  ++     ++E+N E  N    ++
Sbjct: 1522 RLNERNRTSLEELRVSERTWKSAMTTAKKPAEEQERAVQE-QRRWEESNHEMTNRNTALT 1580

Query: 264  RDLEQNQRTFADEMSKLTI 282
            ++ ++ +    D+++++  
Sbjct: 1581 KECDRLRVEMRDQLNRMNG 1599



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 73  ENGSQILQGTPLLTFEDIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
               + L+G       D++   L +D+ +     L+  ++TE+   D  + +        
Sbjct: 500 RETQRSLKGDVAAMKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECRAKL 559

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +   E+  +   +     + +                S     T    I     ++ENK+
Sbjct: 560 DEMAEKEAELRKELAEFQAIITAMEGEGKLNQEQFLESKNELNTLTDQIESLNSEVENKN 619

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLR 242
             +R L+++ Q+    ++N+   +        +    +     E   L E ++E+   + 
Sbjct: 620 EEIRNLMATLQEKEVHIQNVRTSSHQLTATYEEANGEIDILKAELTRLHEQVNERTRQIS 679

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             NE YD+A  +    L++++   ++       E+ ++    + +E++ 
Sbjct: 680 EANEKYDDAARKNDALLEDVAT-WQEKYEQLKMELEEMNRRGQEKEREE 727



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 68/208 (32%), Gaps = 14/208 (6%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH---------S 147
           +  +      R   + E+S  + +  + D L +   S +  +                  
Sbjct: 469 EALRSKDTEERSRFEKERSEREKIRRESDELRETQRSLKGDVAAMKTDLDDKTLRLDMLE 528

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---N 204
           T        + +       +   +        ++  K + LR  L+  Q  +T M+    
Sbjct: 529 TERDELKKKLETEREQADQRDLEIAECRAKLDEMAEKEAELRKELAEFQAIITAMEGEGK 588

Query: 205 LFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           L ++  + S+N+LN     +     E+     E +N++  + E              +++
Sbjct: 589 LNQEQFLESKNELNTLTDQIESLNSEVENKNEEIRNLMATLQEKEVHIQN-VRTSSHQLT 647

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
              E+         ++LT L +   ++T
Sbjct: 648 ATYEEANGEIDILKAELTRLHEQVNERT 675


>gi|104779979|ref|YP_606477.1| hypothetical protein PSEEN0739 [Pseudomonas entomophila L48]
 gi|95108966|emb|CAK13662.1| conserved hypothetical protein [Pseudomonas entomophila L48]
          Length = 438

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 52/154 (33%), Gaps = 4/154 (2%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            SV +  E++     V       G+I +F V+    +  G  L+ F+        D+ + 
Sbjct: 193 QSVLAPAEVVPRAGRVVAAPLD-GVIAEFLVKPNQTVAMGDVLVRFDATTLKAQADVAER 251

Query: 102 SIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           ++   +  +             N + D+L    E +  +L         +  +    GI+
Sbjct: 252 ALGVAQAELKASTQRAFSDTESNARLDLLAARVEQKRAELDYARQLLGRSEIRAERAGIA 311

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
               + +     +++        + + + LR  L
Sbjct: 312 VFADAERWMGKPVQTGERLMQLADPQMAELRMEL 345


>gi|71280404|ref|YP_270585.1| RND family efflux transporter MFP subunit [Colwellia
           psychrerythraea 34H]
 gi|71146144|gb|AAZ26617.1| efflux transporter, RND family, MFP subunit [Colwellia
           psychrerythraea 34H]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 71/204 (34%), Gaps = 30/204 (14%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           K       LN QE +      EL+ N+ E +  L+ ++EL                  +E
Sbjct: 102 KKGAKLVKLNNQEELAK--VNELKANLSESQAHLKRLSELLASRATS--------KSLVE 151

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q +       ++L          TI +P AG ++  +  S   Y      +  +     L
Sbjct: 152 QQEAKTKAIEAQLVSARAKLNDLTIRAPFAG-VLGFREASKGAYIDAGDVITSL---DDL 207

Query: 328 TYIRA--KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + I+    +  + + H+  G   +     Y D   K+F   I  ID  I     ++    
Sbjct: 208 SIIKVDFHLPERLLTHIHVGQQVSAVNSAYKD---KEFIGKITAIDSRIDSSTRSI---- 260

Query: 386 YYEVILKITDLAFSDNNIELRNGF 409
             +V   I++ A     ++L  G 
Sbjct: 261 --KVRATISNKA-----LKLHPGM 277



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 71/185 (38%), Gaps = 12/185 (6%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
           ++     +   ++ KR+  + ++ ++       L     SV + G     + V  I S +
Sbjct: 35  YLQWPEAKQEKSTFKRVVAVKMVPVL-------LAEFIESVEAVGTARANEQV-VITSKY 86

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           S ++ +   ++G ++ +G  L+   + E    ++  K ++   + H+      L      
Sbjct: 87  SDLVDEIYFDDGERVKKGAKLVKLNNQEELAKVNELKANLSESQAHLKRLSELLASRATS 146

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             ++E+    +E +      +  S  +K+ +  I + +  +       +  Y++  D+  
Sbjct: 147 KSLVEQ----QEAKTKAIEAQLVSARAKLNDLTIRAPFAGVLGFREASKGAYIDAGDVIT 202

Query: 184 KSSLL 188
               L
Sbjct: 203 SLDDL 207


>gi|117918971|ref|YP_868163.1| RND family efflux transporter MFP subunit [Shewanella sp. ANA-3]
 gi|117611303|gb|ABK46757.1| efflux transporter, RND family, MFP subunit [Shewanella sp. ANA-3]
          Length = 426

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 60/179 (33%), Gaps = 11/179 (6%)

Query: 207 EKNAVSQNDLNQQE-------RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            ++ V   ++ + E         V K+  E      E   + R        +    A   
Sbjct: 134 ARHVVPGQEVKKGEPLLTLGGAEVAKAQAEYINAAAEWSRVRRMSEGAVSVSRRMQAQVD 193

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E+ R + +  +    ++  L    +      +L+PI G +  + +           PLM
Sbjct: 194 AELKRAILEAIKMTDAQIRTLESTPEAIGSYQLLAPIDGRVQQDIAM-LGQVFTAGTPLM 252

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           ++       ++ A++TP Q  +V  G  A V+          K      ++D +   + 
Sbjct: 253 QLT-DESHLWVEAQLTPAQAANVNVGGPALVQVG--DKTLAGKIIGRSHELDSVTRTEQ 308



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/136 (11%), Positives = 46/136 (33%), Gaps = 2/136 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDIE-TTDLIDLKKV 101
             ++  ++ + +     +P   + ++   V  G ++ +G PLLT    E      +    
Sbjct: 108 TMATATLVVDRDRTATLAPQLDVRVQARHVVPGQEVKKGEPLLTLGGAEVAKAQAEYINA 167

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           + +  R    +E +       +  V  +   +  E +     +  +  S     G   + 
Sbjct: 168 AAEWSRVRRMSEGAVSVSRRMQAQVDAELKRAILEAIKMTDAQIRTLESTPEAIGSYQLL 227

Query: 162 RSLKMKLTRMRSIYLN 177
             +  ++ +  ++   
Sbjct: 228 APIDGRVQQDIAMLGQ 243


>gi|90425311|ref|YP_533681.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90107325|gb|ABD89362.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 430

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 75/258 (29%), Gaps = 20/258 (7%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
                   +          E +   LR L         M     + N ++      +   
Sbjct: 119 EASELQAAVVQTEGAVAQAEARVRQLRELTKPAADQALMQ---AQANLLNAQAAYDRASK 175

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           +  S    R  + +    L         A L+       +  D    +   A   + L  
Sbjct: 176 LAGSGYGTRATLDDATKNLDVARTQVRTAELQVFTS-SPVGSDYVMAETQLAQARANLNT 234

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                   TI++P  G ++  ++      AQ  + ++ + P   +  +  ++  K +  +
Sbjct: 235 ARARLNYATIVAPRDG-VLITRNVERGMVAQPGKAMLVLAPKGDIQVV-VQIDEKNLGLL 292

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             G TA      Y D R   F A+I  I+P +     ++Q     +++++        + 
Sbjct: 293 TLGQTALASADAYPDQR---FVAVISYINPSVDINRASVQI----KLLVRDPPDYLRQD- 344

Query: 403 IELRNGFPAEVLFTAKNT 420
                     V       
Sbjct: 345 ------MTVSVDVEIARR 356


>gi|219670676|ref|YP_002461111.1| efflux transporter RND family, MFP subunit [Desulfitobacterium
           hafniense DCB-2]
 gi|219540936|gb|ACL22675.1| efflux transporter, RND family, MFP subunit [Desulfitobacterium
           hafniense DCB-2]
          Length = 442

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 89/267 (33%), Gaps = 39/267 (14%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSS------------SGEILNED 54
           KN ++N       +  +  + ++  +  S L P+  +V +             G++L   
Sbjct: 26  KNNQKNTRKRRVIIYGIIAVLVLASVLASSLKPLAGTVLTVEPKEFVRGFTEEGQVLAAR 85

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
                 S   G I    V NG  + +G  LL  +  +    +   K  ++++      E 
Sbjct: 86  EWPLYTSVD-GKIMAVHVRNGDSVSKGRTLLELDTTDLVYQLTALKAQLRSV------EG 138

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
             L    +    L      +++ LL    +  +   +  +  + +++ +  + LT+    
Sbjct: 139 QHLQTTGDPIKAL-----VQQQTLLIEQAERDALALEQSHSRMKALFDAGAIPLTQYEEA 193

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            L      N     +A L+   +               Q  L   E+I       L+  I
Sbjct: 194 RLQAEKARNVLEQQKAALALLYE---------------QQSLPGTEQIYAGQKDALQAQI 238

Query: 235 HEQKNMLRHINELYDEANLEFANYLKE 261
            + ++ +        E  L   ++LKE
Sbjct: 239 SQLEDRIGKAKVTAPEDGLIKDSHLKE 265


>gi|333030916|ref|ZP_08458977.1| efflux transporter, RND family, MFP subunit [Bacteroides coprosuis
           DSM 18011]
 gi|332741513|gb|EGJ71995.1| efflux transporter, RND family, MFP subunit [Bacteroides coprosuis
           DSM 18011]
          Length = 355

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 70/197 (35%), Gaps = 19/197 (9%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +    L  R+N+  Q+  L     LY++  L    YL     +LE  Q+  A   + L 
Sbjct: 100 ALQNELLANRKNVAIQQRGLASAKSLYEDQLLSHEEYLT-AESNLELAQQELAQVQNTLA 158

Query: 282 ILEKTREQK--TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           I           I +  +G ++     +      +   L+ I       +I+ ++ P QI
Sbjct: 159 IYGTPIADNLFEIRAKQSGYVIQKDI-TPFLTIGKEDHLLSIA-DLSTLWIQVQIHPTQI 216

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             ++KG    +    Y       FK  I ++ PII  ++  +              +  +
Sbjct: 217 PLIRKGNRVDIHSATYPQE---VFKGEIFQLSPIIDPKEKVMHAL-----------IVVN 262

Query: 400 DNNIELRNGFPAEVLFT 416
           + + +L+     EV   
Sbjct: 263 NESFKLKPSMVVEVQVK 279


>gi|308388733|gb|ADO31053.1| AcrA/AcrE family protein [Neisseria meningitidis alpha710]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATAKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 79/262 (30%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        +    E      + L     ++ + +         +
Sbjct: 112 LVSAQIALGSAEKKYKRQAALWKDDATAKEDLESAQDALAAAKANVAELKALIRQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 172 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 230

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 231 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 287

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 288 SFVP-----NPDGKLATGMTTQ 304


>gi|218548401|ref|YP_002382192.1| macrolide transporter subunit MacA [Escherichia fergusonii ATCC
           35469]
 gi|218355942|emb|CAQ88557.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia fergusonii ATCC 35469]
 gi|324113826|gb|EGC07801.1| efflux transporter [Escherichia fergusonii B253]
 gi|325496822|gb|EGC94681.1| macrolide transporter subunit MacA [Escherichia fergusonii ECD227]
          Length = 371

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 70/224 (31%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L      ++  L     +  +        L      +          
Sbjct: 111 LRAQRQQAEAELKLARVTLSRQQKLAQTQAISQQDLDTAVTELAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D +  +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPQT-RYEGRIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                +    LR    A+V           T     +  P+ DN
Sbjct: 283 -----NPQGVLRLDMTAQVHIQLAEVKNVLTIPLSALGDPVGDN 321



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 3/140 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I 
Sbjct: 44  GELQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGIIDPEQAQNQIK 102

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++  LR      ++ L          +K  +++     D          K     I
Sbjct: 103 EVEATLMELRAQRQQAEAELKLARVTLSRQQKLAQTQAISQQDLDTAVTELAVK--QAQI 160

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
            ++   +K     + +   N
Sbjct: 161 GTIDAQIKRNQASLDTAKTN 180


>gi|169632516|ref|YP_001706252.1| nodulation protein [Acinetobacter baumannii SDF]
 gi|184159385|ref|YP_001847724.1| membrane-fusion protein [Acinetobacter baumannii ACICU]
 gi|239501769|ref|ZP_04661079.1| membrane-fusion protein [Acinetobacter baumannii AB900]
 gi|260557207|ref|ZP_05829423.1| nodulation protein [Acinetobacter baumannii ATCC 19606]
 gi|332876225|ref|ZP_08444000.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6014059]
 gi|169151308|emb|CAP00012.1| nodulation protein [Acinetobacter baumannii]
 gi|183210979|gb|ACC58377.1| Membrane-fusion protein [Acinetobacter baumannii ACICU]
 gi|260409313|gb|EEX02615.1| nodulation protein [Acinetobacter baumannii ATCC 19606]
 gi|322509297|gb|ADX04751.1| nolF [Acinetobacter baumannii 1656-2]
 gi|323519324|gb|ADX93705.1| membrane-fusion protein [Acinetobacter baumannii TCDC-AB0715]
 gi|332735497|gb|EGJ66549.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6014059]
          Length = 372

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 11/212 (5%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +R++  + +  +  ++      +  QK       +   N  +   L Q +  +  +  + 
Sbjct: 67  IRAVQQSSIQAQVSATATAVTANVGQKVQKGQVLVRLNNQDNAARLAQAQANLASAQAQA 126

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
               +      R +N+ +  A +EF     +    LE  +   A+    + I +K     
Sbjct: 127 ELARNLMNRKQRLLNQGFI-ARVEFEQSQVDYKGQLESVRAQQAN----VDIAKKADRDG 181

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I SPI+G I   Q           Q L +IV +     I+AK+  +Q   +K G +   
Sbjct: 182 IITSPISGVITKRQV-EPGQTVSVGQTLFEIV-NPDQLEIQAKLPIEQQSALKVGSSIQY 239

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           +         K+  AI+ +I P+  Q    ++
Sbjct: 240 QI----QGNSKQLHAILTRISPVADQDSRQIE 267



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 39/100 (39%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I++  S          G ++ +G  L+   + +    +   + ++ + +   +  ++ ++
Sbjct: 75  IQAQVSATATAVTANVGQKVQKGQVLVRLNNQDNAARLAQAQANLASAQAQAELARNLMN 134

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                 +    A    E+  +D+ G+  S  ++  N  I+
Sbjct: 135 RKQRLLNQGFIARVEFEQSQVDYKGQLESVRAQQANVDIA 174


>gi|133903947|ref|NP_494820.3| abnormal DYe Filling family member (dyf-14) [Caenorhabditis elegans]
          Length = 1942

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 76/199 (38%), Gaps = 10/199 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK-------- 144
             +    ++  I++++  I T +  L    +K   L K  E    QL D L          
Sbjct: 1446 EESSRSREHEIRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHDALESKEKATGLV 1505

Query: 145  -YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +  +     +    R  ++ + + R       +L  K   L        +++T  +
Sbjct: 1506 GVQDSKHRDLEEQLDRANRERELAIGKQRRTLAENENLFRKLEQLEKEREQLMREITDER 1565

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+N  S  +L   ER    +    ++   EQ+  ++     ++E+N E  N    ++
Sbjct: 1566 RLNERNRTSLEELRVSERTWKSAMTTAKKPAEEQERAVQE-QRRWEESNHEMTNRNTALT 1624

Query: 264  RDLEQNQRTFADEMSKLTI 282
            ++ ++ +    D+++++  
Sbjct: 1625 KECDRLRVEMRDQLNRMNG 1643



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 73  ENGSQILQGTPLLTFEDIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
               + L+G       D++   L +D+ +     L+  ++TE+   D  + +        
Sbjct: 544 RETQRSLKGDVAAMKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECRAKL 603

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +   E+  +   +     + +                S     T    I     ++ENK+
Sbjct: 604 DEMAEKEAELRKELAEFQAIITAMEGEGKLNQEQFLESKNELNTLTDQIESLNSEVENKN 663

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLR 242
             +R L+++ Q+    ++N+   +        +    +     E   L E ++E+   + 
Sbjct: 664 EEIRNLMATLQEKEVHIQNVRTSSHQLTATYEEANGEIDILKAELTRLHEQVNERTRQIS 723

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             NE YD+A  +    L++++   ++       E+ ++    + +E++ 
Sbjct: 724 EANEKYDDAARKNDALLEDVAT-WQEKYEQLKMELEEMNRRGQEKEREE 771



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 68/208 (32%), Gaps = 14/208 (6%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH---------S 147
           +  +      R   + E+S  + +  + D L +   S +  +                  
Sbjct: 513 EALRSKDTEERSRFEKERSEREKIRRESDELRETQRSLKGDVAAMKTDLDDKTLRLDMLE 572

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---N 204
           T        + +       +   +        ++  K + LR  L+  Q  +T M+    
Sbjct: 573 TERDELKKKLETEREQADQRDLEIAECRAKLDEMAEKEAELRKELAEFQAIITAMEGEGK 632

Query: 205 LFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           L ++  + S+N+LN     +     E+     E +N++  + E              +++
Sbjct: 633 LNQEQFLESKNELNTLTDQIESLNSEVENKNEEIRNLMATLQEKEVHIQN-VRTSSHQLT 691

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
              E+         ++LT L +   ++T
Sbjct: 692 ATYEEANGEIDILKAELTRLHEQVNERT 719


>gi|73854900|gb|AAZ87607.1| putative membrane protein [Shigella sonnei Ss046]
          Length = 380

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 120 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 179

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 180 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 238

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 239 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 291

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 292 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 330



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 55  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 113

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 114 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDL--DTAATEMAVKQAQIGT 171

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 172 IDAQIKRNQASLDTAKTN 189


>gi|116686557|ref|YP_839804.1| RND family efflux transporter MFP subunit [Burkholderia cenocepacia
           HI2424]
 gi|116652272|gb|ABK12911.1| efflux transporter, RND family, MFP subunit [Burkholderia
           cenocepacia HI2424]
          Length = 324

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 61/175 (34%), Gaps = 9/175 (5%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q      ER+   +  + R  + + K       +L    NL  +  ++E    +EQ 
Sbjct: 77  VIDQARYALAERLAEATLAQRRATLAQAKREYARNLQLG---NLVASEQVEESRTRVEQG 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           + + AD    L   +   ++ TI+SP+ G  + +++     Y    + ++ +V       
Sbjct: 134 EASVADAQVSLDTAKLNLQRTTIVSPVDGY-LNDRAPRVGEYVPAGRAVLSVV-DRNSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +       +++ +  G    +             +  ++ I   I  +D      
Sbjct: 192 VDGYFEETKLRGIHIGQPVDIIVMGEPH----ALRGHVQSIVAAIEDRDRTQGAN 242



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 60/169 (35%), Gaps = 23/169 (13%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW--------SILLPIEISVSSSGEILNEDNVVEIK 60
           +K+   ++ + +  L ++ + GL+ W        S     +  V +        +V+++ 
Sbjct: 1   MKKTWLSAGQVLLTLIVVIVAGLVLWRIINYYMFSPWTR-DGHVRA--------DVIQVA 51

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG+I   QV +  ++ +G  L   +         L + ++   R  +   K      
Sbjct: 52  PDVSGLITSVQVADNQEVKRGQVLFVIDQARYALAERLAEATLAQRRATLAQAKREYAR- 110

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 L+       EQ+ +   +     + V +  +S     L ++ T
Sbjct: 111 -----NLQLGNLVASEQVEESRTRVEQGEASVADAQVSLDTAKLNLQRT 154


>gi|327289756|ref|XP_003229590.1| PREDICTED: plectin-like [Anolis carolinensis]
          Length = 4389

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 74/203 (36%), Gaps = 19/203 (9%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
               L + ++  +  +   ++ ++   +          KA   RE Q L    +   +  +
Sbjct: 1151 AEKLKEEEQQRLAEVEAQLEKQRQLAEA-----HARAKAQAEREAQELQRRMEEEVSRRQ 1205

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +         ++++ +L++++          +  + ++A L   ++     K + E+  +
Sbjct: 1206 LVAVDAEQQKQTIQQELSQVKQ---------SSDTQIQAKLKLIEEVEFSRKKVEEEIHL 1256

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +  L   ER    +  ELR      +   R      +EA       L++  +D  Q ++
Sbjct: 1257 VRLQLEASERQKTGAEEELRALRERAEEAERQKRLAQEEAE-----RLRKQVKDESQKKK 1311

Query: 272  TFADEMSKLTILEKTREQKTILS 294
               DE+ +    E+   ++   +
Sbjct: 1312 EAEDELKRKVQAEQQASREKQKA 1334



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 65/201 (32%), Gaps = 4/201 (1%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL-EKAFESREEQLLDFLGKYHSTCS 150
              +   L   + +  R     E+           +L EK    +E   L    +      
Sbjct: 2077 AEEAARLSIEAQEAARLRELAEQDLAQQRALAEKILKEKMVAVQEATRLKAEAEMLQKQK 2136

Query: 151  KVFNYGISSVYR---SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             +       +      ++++LT     +   L+ E K  L  +  +   K      +L +
Sbjct: 2137 DLAQEQAKKLQEDKEQMQLRLTEEAEGFQKTLEAERKRQLEISTDAERLKVQVTELSLAQ 2196

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
              AV +    +++       L   E    +K  L    E+  + + + A  LK+   +LE
Sbjct: 2197 AKAVEEAKRFKKQAEEISQKLHQTELATREKMTLVQTLEIQRQQSDQDAEKLKKAIAELE 2256

Query: 268  QNQRTFADEMSKLTILEKTRE 288
            Q +     E  +L    +  +
Sbjct: 2257 QEKEKLKREAERLQQKSEEMQ 2277



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/208 (9%), Positives = 63/208 (30%), Gaps = 7/208 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                  +     +         + + +  L  +    ++  E  ++ + +   +      
Sbjct: 2205 RFKKQAEEISQKLHQTELATREKMTLVQTLEIQRQQSDQDAEKLKKAIAELEQEKEKLKR 2264

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +       S       K    +   + +    ++  +L       +++   ++ LF++  
Sbjct: 2265 EAERLQQKSEEMQTAQKEQLRQETQMLQKTFLSEKDVLLQKERFVEEEKAKLEKLFQEEV 2324

Query: 211  VSQNDLN-QQERIVYKSTLE---LRENIHEQKNMLRHINE---LYDEANLEFANYLKEIS 263
                DL  +QER   +   E   L   + E +       E      E   +     ++  
Sbjct: 2325 KKARDLTAEQERQQKQMEQEKQKLAAVLEEARKKQAEAEENVRRKQEELQQLEKLRQKQE 2384

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
            + L +  +   + + +L   ++    +T
Sbjct: 2385 KLLAEENQKLRERLERLQEEQRAALSQT 2412



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 80/228 (35%), Gaps = 16/228 (7%)

Query: 80   QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK-----SALDFLNNKYDVLEKAFESR 134
            +    L   +        L+    + L    D E+     + L     K     K F+ +
Sbjct: 2150 KEQMQLRLTEEAEGFQKTLEAERKRQLEISTDAERLKVQVTELSLAQAKAVEEAKRFKKQ 2209

Query: 135  EEQL------LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
             E++       +   +   T  +          +  +     +  +   +  L+ ++  L
Sbjct: 2210 AEEISQKLHQTELATREKMTLVQTLEIQRQQSDQDAEKLKKAIAELEQEKEKLKREAERL 2269

Query: 189  RA----LLSSHQKDLTMMKNLFEKNAVSQND-LNQQERIVYKSTLELRENIHEQKNMLRH 243
            +     + ++ ++ L     + +K  +S+ D L Q+ER V +   +L +   E+    R 
Sbjct: 2270 QQKSEEMQTAQKEQLRQETQMLQKTFLSEKDVLLQKERFVEEEKAKLEKLFQEEVKKARD 2329

Query: 244  INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +    +    +     ++++  LE+ ++  A+    +   ++  +Q  
Sbjct: 2330 LTAEQERQQKQMEQEKQKLAAVLEEARKKQAEAEENVRRKQEELQQLE 2377



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/206 (10%), Positives = 73/206 (35%), Gaps = 13/206 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L+  +   +       +  ++ LR   +           +   L +    R  + +    
Sbjct: 1256 LVRLQLEASERQKTGAEEELRALRERAEE--------AERQKRLAQEEAERLRKQVKDES 1307

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +            + +  ++ + K   +  +   R+  E     ++      ++ + + +
Sbjct: 1308 QKKKEAEDELKRKVQAEQQASREKQKALDDLQKLRMQAEEAERRMKQAELEKERQIQVAQ 1367

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLK 260
             + +K+A  + DL  +     + T +L  ++ ++   + H+ E  D      LE  +  +
Sbjct: 1368 EVAQKSA--EVDLQSRRLSFAEKTAQLELSLKQEHITVTHLQEEADRLKKLQLEAEHSRE 1425

Query: 261  EISRDLEQNQRTFADEMSKLTILEKT 286
            E  +++E+ ++   + +      E+ 
Sbjct: 1426 EAEKEVEKWRQKANEALRLRLQAEEV 1451



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 78/216 (36%), Gaps = 20/216 (9%)

Query: 98   LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES-----REEQLLDFLGKYHSTCSKV 152
            L++ + +  +  ++ E S  +         +KA E+     + E++            K 
Sbjct: 1406 LQEEADRLKKLQLEAEHSREEAEKEVEKWRQKANEALRLRLQAEEVAHVKALAQEEAEKQ 1465

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR---ALLSSHQKDLTMMKNLFEKN 209
                     +  K + + +R   L   +LE +  L           +++L  +K   E  
Sbjct: 1466 KEDAEREARKRSKAEESALRQKELAEQELEKQRKLAEGTAQQKFQAEQELIRLKAEVENG 1525

Query: 210  -----------AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
                          +N++++  +   +   EL +   E + +L+   +  +E+    +  
Sbjct: 1526 EQQRLLLEEELFRLKNEVSEAIQKRKELEEELAKLRTEMELLLQSKAKTEEESRST-SEK 1584

Query: 259  LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             K+I        R  A+E ++L  L +  +++  L+
Sbjct: 1585 SKQILEAEANKLRELAEEAARLRALSEEAKRQRQLA 1620



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/198 (8%), Positives = 58/198 (29%), Gaps = 8/198 (4%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L   +  +   L +                K+  + L  + D+ ++  +  +E       
Sbjct: 2096 LAEQDLAQQRALAEKILKEKMVAVQEATRLKAEAEMLQKQKDLAQEQAKKLQEDKEQMQL 2155

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE-NKSSLLRALLSSHQKDLTMM 202
            +  +  ++ F   + +  +      T    + +   +L   ++  +       ++   + 
Sbjct: 2156 RL-TEEAEGFQKTLEAERKRQLEISTDAERLKVQVTELSLAQAKAVEEAKRFKKQAEEIS 2214

Query: 203  KNLFEKNAVSQNDL-----NQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFA 256
            + L +    ++  +      + +R       E L++ I E +     +    +    +  
Sbjct: 2215 QKLHQTELATREKMTLVQTLEIQRQQSDQDAEKLKKAIAELEQEKEKLKREAERLQQKSE 2274

Query: 257  NYLKEISRDLEQNQRTFA 274
                     L Q  +   
Sbjct: 2275 EMQTAQKEQLRQETQMLQ 2292



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 62/206 (30%), Gaps = 5/206 (2%)

Query: 84   LLTFEDIETTDLIDLKKVSIK-NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            LL  +  +    I+ K   +K +    +  +K  ++    +  ++E+     +       
Sbjct: 1679 LLEEQAAQHKQDIEEKIAQLKKSSENELQRQKGLVEDTLKQRRIVEEEIRILKVNFEKAS 1738

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                    ++     S+       +     +  L ++ LE ++    A  +  +      
Sbjct: 1739 LGKTDLEVELNRIKQSAEEIQRSKQQAEREAEELRQVALEQENHRREAEATVKKIAAAEQ 1798

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            +   +  A     L++ ER+  K     ++    +K   R I    + A        K  
Sbjct: 1799 EAARQCKAA----LDEVERLKAKVEEARKQKELAEKESERQIQLAQEAAQKRIKAEEKAH 1854

Query: 263  SRDLEQNQRTFADEMSKLTILEKTRE 288
               ++Q ++       +         
Sbjct: 1855 LATVQQKEQELMQTRQQEQSALDKLR 1880



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 71/228 (31%), Gaps = 14/228 (6%)

Query: 68   KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            K   V+  +++     +L  +     +     +   + ++  +  E             L
Sbjct: 2115 KMVAVQEATRLKAEAEMLQKQKDLAQEQAKKLQEDKEQMQLRLTEEAEGFQ------KTL 2168

Query: 128  EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE--NKS 185
            E   + + E   D                 +        K     S  L++ +L    K 
Sbjct: 2169 EAERKRQLEISTDAERLKVQVTELSLAQAKAVEEAKRFKKQAEEISQKLHQTELATREKM 2228

Query: 186  SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            +L++ L    Q+     + L +  A  + +  + +R   +   +  E    QK  LR   
Sbjct: 2229 TLVQTLEIQRQQSDQDAEKLKKAIAELEQEKEKLKREAERLQQKSEEMQTAQKEQLRQET 2288

Query: 246  ELYDEANLEFANYLKEISRDLEQNQRTFADE------MSKLTILEKTR 287
            ++  +  L   + L +  R +E+ +             ++    E+ R
Sbjct: 2289 QMLQKTFLSEKDVLLQKERFVEEEKAKLEKLFQEEVKKARDLTAEQER 2336



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 74/207 (35%), Gaps = 16/207 (7%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E + L    ++++K      +  +   +    +  +LE+     ++ + + + +   +  
Sbjct: 1644 EASRLKAEAEIALKEKEAENERLRRLAEDEAYQRRLLEEQAAQHKQDIEEKIAQLKKSSE 1703

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                     V  +LK +      I + +++ E  S     L    + +L  +K   E+  
Sbjct: 1704 NELQRQKGLVEDTLKQRRIVEEEIRILKVNFEKASLGKTDL----EVELNRIKQSAEEIQ 1759

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR------ 264
             S+    ++   + +  LE   +  E +  ++ I     EA  +    L E+ R      
Sbjct: 1760 RSKQQAEREAEELRQVALEQENHRREAEATVKKIAAAEQEAARQCKAALDEVERLKAKVE 1819

Query: 265  ------DLEQNQRTFADEMSKLTILEK 285
                  +L + +     ++++    ++
Sbjct: 1820 EARKQKELAEKESERQIQLAQEAAQKR 1846



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 21/202 (10%), Positives = 60/202 (29%), Gaps = 6/202 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E      ++       +     EK+ L  +  K   L +  +  +  L            
Sbjct: 1829 EKESERQIQLAQEAAQKRIKAEEKAHLATVQQKEQELMQTRQQEQSALDKLREAAEQAKK 1888

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE--- 207
                  ++ +    +  L+R       R+  + ++       +  Q+D    +   E   
Sbjct: 1889 AAEEAELARIKAEKEAALSRQLVEEAERM--KQRAEEEAQAQAKAQEDAEKQRKEAELEA 1946

Query: 208  -KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             K A ++    +Q+ +      + ++   +       + +   +  L+      + +   
Sbjct: 1947 AKRAQAEQAALKQKELADAEMAKHKKFSEQTLRQKAQVEQELTKVKLQLEQTDHQKNILE 2006

Query: 267  EQNQRTFADEMSKLTILEKTRE 288
            E+ QR   +    +    +  E
Sbjct: 2007 EEQQRLKDEVTEAMKQKAQVEE 2028


>gi|225350606|gb|ACN88166.1| SilD [Streptococcus pyogenes]
 gi|225350612|gb|ACN88170.1| SilD [Streptococcus pyogenes]
          Length = 319

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 83/245 (33%), Gaps = 14/245 (5%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL------RALLSSHQKDLT 200
           +  + + N+ IS +   L     ++      +  + N+   L      +  L  +Q    
Sbjct: 29  NNQASLANHAISVITSQLDELHQKITDYEELKRAINNQEYKLSPENPHQTALKKYQTQFQ 88

Query: 201 MMK--NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
             +  +  ++  +SQ   N  E     + L ++       N+         + ++    +
Sbjct: 89  AQEDNSALKEEYLSQISQNIPELESSMANLSIQR--ASTGNLSLPDTSHRIKIDILKTQF 146

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L+  S+ L   +    +   ++       +   I++P  GTI  N  F   +       +
Sbjct: 147 LQNASQQLTTVENQITELKDQIEQANIQLKNNIIIAPETGTIHLNSEFEGKSLIPNGSEV 206

Query: 319 MKIVPHSK---LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            +I P  +     +I   VT + +  +K+     +      + +       I+ ID   +
Sbjct: 207 AQIYPDIQKIKEVFITYYVTSEHVSLLKEKQGVRLSLEKVGN-QTLTINGTIQTIDKSAT 265

Query: 376 QQDNN 380
           + D  
Sbjct: 266 KTDQG 270


>gi|206578754|ref|YP_002239470.1| macrolide-specific efflux protein MacA [Klebsiella pneumoniae 342]
 gi|288936318|ref|YP_003440377.1| efflux transporter RND family, MFP subunit [Klebsiella variicola
           At-22]
 gi|290510626|ref|ZP_06549996.1| HlyD family secretion protein [Klebsiella sp. 1_1_55]
 gi|206567812|gb|ACI09588.1| macrolide-specific efflux protein MacA [Klebsiella pneumoniae 342]
 gi|288891027|gb|ADC59345.1| efflux transporter, RND family, MFP subunit [Klebsiella variicola
           At-22]
 gi|289777342|gb|EFD85340.1| HlyD family secretion protein [Klebsiella sp. 1_1_55]
          Length = 371

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 81/229 (35%), Gaps = 41/229 (17%)

Query: 17  LKRMTLLSIIGIIGLITWSI---LLPI-------------EISVSSSGEILNEDNVVEIK 60
            + +  L  I ++GL  W       P+             + SV ++G++     V ++ 
Sbjct: 7   RRTIWWLLAIVVLGLAVWGWRILNAPLPNYQTLVVRKGDLQQSVLATGKLDALRKV-DVG 65

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +  SG +K   V  G ++ +   L   +  +  + I   + ++  LR  ++  ++     
Sbjct: 66  AQVSGQLKTLHVNIGDKVKKDQLLGVIDPEQAQNQIKEVEATLMELRAQLNQARA----- 120

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                      ES+  Q+     +  +    V    + +    L +K  ++ +I      
Sbjct: 121 -----------ESKLAQVTLARQQQLAQRQLVSRQDLDTAATDLAVKQAQIGTI------ 163

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTL 228
            E +    +A L + + +L   + L      V+Q    Q + ++     
Sbjct: 164 -EAQIKRNQATLDTAKTNLDYTRILAPMAGEVTQITTLQGQTVIAAQQA 211



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 69/222 (31%), Gaps = 30/222 (13%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQN 269
           +QN + + E  + +   +L +   E K     +      A  +      L   + DL   
Sbjct: 97  AQNQIKEVEATLMELRAQLNQARAESKLAQVTLARQQQLAQRQLVSRQDLDTAATDLAVK 156

Query: 270 QRTFADEMSK-------LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-----P 317
           Q       ++       L   +   +   IL+P+AG +    +          Q      
Sbjct: 157 QAQIGTIEAQIKRNQATLDTAKTNLDYTRILAPMAGEVTQITTLQGQTVIAAQQAPNILT 216

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L  +        ++A+V+   + H++ G  A   F    D    +++  ++     I   
Sbjct: 217 LADL----STMLVKAQVSEADVIHLRPGQKAW--FTVLGDPLT-RYEGTLK----DILPT 265

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              +    +Y    ++ +         LR    A+V      
Sbjct: 266 PEKVNDAIFYYARFEVPNPQGI-----LRLDMTAQVHIQLAE 302


>gi|205355456|ref|ZP_03222227.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346690|gb|EDZ33322.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 390

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  ++ + G++  +D V ++ +  SG I K  V+ G+ + QG  +   +  +  + +D+ 
Sbjct: 42  ISQTIEAVGKVYAKDQV-DVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDIT 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +++ + +++++K AL+  N +Y   +K + ++   L +   + ++  +      ++ 
Sbjct: 101 KAQLESAKANLESKKVALEIANKQYQREQKLYAAKASSLENLETQKNNYYT--LKANVAE 158

Query: 160 VYRSLKMKLTRMRSIY 175
           +   +      +++  
Sbjct: 159 LNAQVVQLEITLKNAQ 174



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 6/167 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q +  +      K  LE+    ++++  L        E      N    +  ++ +   
Sbjct: 102 AQLESAKANLESKKVALEIANKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELNA 161

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHSKLTY 329
                   L   +K     TI +P+ G ++             +Q    IV   +     
Sbjct: 162 QVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVD-EGQTVNANQNTPTIVRIANLDEME 220

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           +R ++    +  +K G    + F    D  +K + A I  IDP  ++
Sbjct: 221 VRMEIAEADVSKIKVG--TELDFSLLND-PQKTYHAKIASIDPADTE 264


>gi|253699469|ref|YP_003020658.1| efflux transporter RND family, MFP subunit [Geobacter sp. M21]
 gi|251774319|gb|ACT16900.1| efflux transporter, RND family, MFP subunit [Geobacter sp. M21]
          Length = 390

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 58/173 (33%), Gaps = 3/173 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   V  +G +  +  VV I S  +G I +   + G ++ +G  L   E+ +        
Sbjct: 47  LVSQVYGNGTVEAKV-VVGISSKITGRIAELYADQGDRVKKGELLARLENEDLLHQQQQS 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTCSK-VFNYGI 157
           +  +      +  E++ L        + EK A   R     + + +  S      F    
Sbjct: 106 EAGLNRSAAGLVAEQANLQKAKANLALAEKNARRFRSLAAKEMVSRLESEQYDTAFLLAR 165

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             V RS             NR +L    S +   L    +D  ++    EK A
Sbjct: 166 EEVSRSQASIEAIKMEQRANRANLGYARSKVNDALIYAPQDGVIITRDLEKGA 218



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 79/292 (27%), Gaps = 45/292 (15%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +      R  +L    G        +       +    +     +       +  +    
Sbjct: 65  ISSKITGRIAELYADQGDRVKKGELLARLENEDLLHQQQQSEAGLNRSAAGLVAEQANLQ 124

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +A L+  +K+    ++L  K  VS+ +                             +E
Sbjct: 125 KAKANLALAEKNARRFRSLAAKEMVSRLE-----------------------------SE 155

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            YD A L     +      +E  +       + L           I +P  G I+  +  
Sbjct: 156 QYDTAFLLAREEVSRSQASIEAIKMEQRANRANLGYARSKVNDALIYAPQDGVIIT-RDL 214

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      +  +       +++A V   Q++ V  G  A +          ++F   
Sbjct: 215 EKGATLTAGMSIFTLA-DPAAVWVKANVDESQLKGVTVGKKAAILL---RSAPGEQFPGQ 270

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           + ++     +    L+            D+AF+      R G  +EV  T  
Sbjct: 271 VARLGQQSDRVTEELEV-----------DVAFTPPLESFRLGEQSEVYITTG 311


>gi|121634343|ref|YP_974588.1| putative periplasmic protein [Neisseria meningitidis FAM18]
 gi|120866049|emb|CAM09787.1| putative periplasmic protein [Neisseria meningitidis FAM18]
 gi|325131778|gb|EGC54479.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           M6190]
 gi|325137668|gb|EGC60245.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           ES14902]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 78/262 (29%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        N    E      +       ++ + +         +
Sbjct: 112 LVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELKALIRQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    I+  +   +   + ++    
Sbjct: 172 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSAPTIIQLANLDMMLNKMQIAEGD 230

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 231 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 287

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 288 SFVP-----NPDGKLATGMTTQ 304


>gi|81244776|gb|ABB65484.1| putative membrane protein [Shigella boydii Sb227]
          Length = 380

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 120 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAEIKRN 179

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 180 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 238

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 239 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 291

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 292 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 330



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 55  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 113

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 114 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDL--DTAATEMAVKQAQIGT 171

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 172 IDAEIKRNQASLDTAKTN 189


>gi|325103917|ref|YP_004273571.1| secretion protein HlyD family protein [Pedobacter saltans DSM
           12145]
 gi|324972765|gb|ADY51749.1| secretion protein HlyD family protein [Pedobacter saltans DSM
           12145]
          Length = 315

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/237 (11%), Positives = 80/237 (33%), Gaps = 14/237 (5%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +   +      L  K+  ++  +   +    ++K   E     +  L+   +    +T +
Sbjct: 74  QKAQLEATIGTLHQKTMDVKPQVKLLKDQGEVLKAQLENAFSERIRLHNLIKADAATTKQ 133

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L +   +   + + I     +  ++      + +  L +    +      +  ++    +
Sbjct: 134 LDDINLQIDVLKKQIEANQQQIKVQETITGTQNNTVLSE----YTPLKKSVAQIDDQLSR 189

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I++P++GT++   + +        + L KI     +  +RA +T  Q+  +K      
Sbjct: 190 TRIVNPVSGTVLTKYAMA-GEVTAAGKALYKIA-DLSVITLRAYITETQLSQIKLNQKVK 247

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQ------QDNNLQTQEYYEVILKITDLAFSD 400
           V          K +  +I  I    ++      Q  + +    Y + + + +     
Sbjct: 248 VLVDT-DPKHYKTYPGVITMI-ADKAEFTPKTIQTKDERANLVYAIKVHVKNDGLLK 302


>gi|306844916|ref|ZP_07477498.1| efflux transporter, RND family, MFP subunit [Brucella sp. BO1]
 gi|306274745|gb|EFM56529.1| efflux transporter, RND family, MFP subunit [Brucella sp. BO1]
          Length = 383

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 59/206 (28%), Gaps = 27/206 (13%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN----------- 269
           R+    T++  + I E       I     E  L+ A   ++    L              
Sbjct: 101 RVRAGDTVKEGDLIAELDAETEQIAVAKAETALKDAQTTRQRIARLRATNTATEVQAVGA 160

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   A+    L   +    ++ + +PI G +      +  NY      + +I        
Sbjct: 161 ELAVANAQLALQDAQLALSRRMVRAPINGIVGILPVNA-GNYVTAQTSIARI-DDRSTVL 218

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I   V  +    +K G   T     +        K  I  +D ++ +    L       V
Sbjct: 219 IDIWVPERFAPQIKVGQPLTAESTAFPGEIY---KGRINAVDNMLDEASRTLH------V 269

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
             ++ +         LR G    V  
Sbjct: 270 RAEVPNAED-----RLRAGMSFSVTI 290



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 34/105 (32%), Gaps = 3/105 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKS 115
           +    SG + K +V  G  + +G  +   +       +   + ++K+    R  I   ++
Sbjct: 89  VTPYSSGYMTKLRVRAGDTVKEGDLIAELDAETEQIAVAKAETALKDAQTTRQRIARLRA 148

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                  +    E A  + +  L D          +    GI  +
Sbjct: 149 TNTATEVQAVGAELAVANAQLALQDAQLALSRRMVRAPINGIVGI 193


>gi|254522498|ref|ZP_05134553.1| fusaric acid resistance protein [Stenotrophomonas sp. SKA14]
 gi|219720089|gb|EED38614.1| fusaric acid resistance protein [Stenotrophomonas sp. SKA14]
          Length = 295

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V +            S  E + ++ + +  +     L D    E A   +   +     
Sbjct: 67  VVDRARYRIALEQAKASLAERQASVAQLRREIGRDRSLQDLVAAEDAEVRRAKLQA---A 123

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   A   + + + E    +  + +P  G +   ++    +Y    +P++ ++  +    
Sbjct: 124 QAALATAQAAVDLAELNLGRTEVRAPADGRVND-RTLRVGDYVVAGKPVLALL-DTGSFR 181

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID---------------PII 374
           I       +++ V  G +  +R            +  +E I                P +
Sbjct: 182 IDGYFEETRLRGVAPGQSVDIRL----MGESVPLRGHVESIAAGIEDRYRSNGSSLLPNV 237

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +   + ++  +   V ++I ++      +EL  G  A V     +T
Sbjct: 238 TPAFDWVRLAQRIPVRIRIDEV---PKGVELIAGRTATVTVQTSST 280



 Score = 39.6 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 8/67 (11%), Positives = 25/67 (37%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG+++   V +   + +G  L   +       ++  K S+   +  +   +  +    + 
Sbjct: 45  SGLVETVDVADNQAVKKGDLLFVVDRARYRIALEQAKASLAERQASVAQLRREIGRDRSL 104

Query: 124 YDVLEKA 130
            D++   
Sbjct: 105 QDLVAAE 111


>gi|325133936|gb|EGC56592.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           M13399]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 79/262 (30%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        N    E      + L     ++ + +         +
Sbjct: 112 LVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDALAAAKANVAELKALIRQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 172 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 230

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 231 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 287

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 288 SFVP-----NPDGKLATGMTTQ 304


>gi|240138984|ref|YP_002963459.1| hypothetical protein MexAM1_META1p2399 [Methylobacterium extorquens
           AM1]
 gi|240008956|gb|ACS40182.1| conserved hypothetical protein; putative exported protein
           [Methylobacterium extorquens AM1]
          Length = 293

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 89/245 (36%), Gaps = 20/245 (8%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +   +     L  ++S+ +NR     K+  + A L S  ++  +  +  +  + +  +  
Sbjct: 40  AQKLKIGSATLGILKSVPVNR-GAAVKAGDIIARLDSSVEEANVALSRAQAESTAGIEAQ 98

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q    +YK  LE +  + +       ++++  +  +   +   EI   L+          
Sbjct: 99  QTRVELYKRRLERQNQLSKGIVTQEKLDQVEADYEIGRRDLQTEI---LKHKLNGI---- 151

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
            +L   E   E + I SPI G +   +  S+  + +Q   +  +V      Y+ A +   
Sbjct: 152 -ELQRAEAQLELRMIRSPIRGIVTE-RLMSAGEFVRQDSAIFTLV-QLDPLYVEAYLPVS 208

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           + + +  G  ATV            ++A +  +D +             + V L++ +  
Sbjct: 209 RWKEIALGMPATVVL---DQPIGGAYEAKVSVVDQVFDAASGT------FGVRLELPNPD 259

Query: 398 FSDNN 402
           F    
Sbjct: 260 FKLPG 264



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 65/187 (34%), Gaps = 13/187 (6%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A  ++  + + +  + L T++              +     +  I S   GI+K   V  
Sbjct: 5   AGTRQARICAALAGLFLSTYAASAQ---DTRVDCVVEPAQKLK-IGSATLGILKSVPVNR 60

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G+ +  G  +   +       + L +   ++         + ++    + ++ ++  E R
Sbjct: 61  GAAVKAGDIIARLDSSVEEANVALSRAQAEST--------AGIEAQQTRVELYKRRLE-R 111

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + QL   +           +Y I       ++   ++  I L R + + +  ++R+ +  
Sbjct: 112 QNQLSKGIVTQEKLDQVEADYEIGRRDLQTEILKHKLNGIELQRAEAQLELRMIRSPIRG 171

Query: 195 HQKDLTM 201
              +  M
Sbjct: 172 IVTERLM 178


>gi|77361195|ref|YP_340770.1| hypothetical protein PSHAa2272 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876106|emb|CAI87328.1| conserved protein of unknown function; putative membrane protein
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 350

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 88/265 (33%), Gaps = 30/265 (11%)

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            S+      S +   +       +   +    + +  +     ++S Q D        + 
Sbjct: 29  ASQGEQADFSQMATQVSAHTVTSQENAVMIEAIGSARANQAVYITSAQSDYVTNIFFEDG 88

Query: 209 NAVSQNDLNQQERIVYKSTL--ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           + VS+     Q +   +     EL  N+ E+K  L  + EL        +         L
Sbjct: 89  DLVSKGQKLVQLQSQQEQIAVKELNINLREEKRQLDRLTEL--------SRSQSTAKSLL 140

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           E+         ++L   +    + TI +P +G ++  +  S   Y   S  +  +     
Sbjct: 141 EEQLSRVDATQAQLESAKTKLAEMTITAPFSG-MLGKREISIGAYVNNSSIITTL---DD 196

Query: 327 LTYIRA--KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           ++ I+   KV  K +  +  G     +   Y D     F   +  I   I     +    
Sbjct: 197 ISIIKVDFKVPEKYLAQLATGMKVLTQNDAYPDQT---FIGKVTHISSRIDSVTRS---- 249

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
                 +++T  +F++N+  LR G 
Sbjct: 250 ------VEVT-ASFANNSGLLRPGM 267



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 42/115 (36%), Gaps = 4/115 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +     E+G  + +G  L+  +  +    +    ++++  +  +D     L  L+     
Sbjct: 80  VTNIFFEDGDLVSKGQKLVQLQSQQEQIAVKELNINLREEKRQLDR----LTELSRSQST 135

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +   E +  ++     +  S  +K+    I++ +  +  K       Y+N   +
Sbjct: 136 AKSLLEEQLSRVDATQAQLESAKTKLAEMTITAPFSGMLGKREISIGAYVNNSSI 190


>gi|86143488|ref|ZP_01061873.1| putative multidrug resistance protein (substrate binding
           lipoprotein) [Leeuwenhoekiella blandensis MED217]
 gi|85829935|gb|EAQ48396.1| putative multidrug resistance protein (substrate binding
           lipoprotein) [Leeuwenhoekiella blandensis MED217]
          Length = 351

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 65/220 (29%), Gaps = 35/220 (15%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V   D  Q+  ++ K      +  +E +     + +       E           + + +
Sbjct: 78  VGMGDFVQKGSLIAKIDGTAYQKQYEARRAQAEMAKDNYNRVEEVYKKGSIAEVKMVEAR 137

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK---------I 321
             +    +      +  +   I +P  G I   +   + + A   QP++          I
Sbjct: 138 SNYKQAEAAAQASYQNVKFTRITAPFTGYI-GEKMMETGDLASPGQPIVDFFDIDKLKAI 196

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           +P          +   Q+   + G  A V+          +++  I +I           
Sbjct: 197 IP----------IPDDQVNQYQTGDKAIVKIEVLDT----EYEGEITEISVQSDSNT--- 239

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                Y   + IT     + N +++ G    V+   K  T
Sbjct: 240 ---PSYTAKITIT-----NQNKKIKPGMACTVILPEKEKT 271



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 19/189 (10%), Positives = 64/189 (33%), Gaps = 6/189 (3%)

Query: 46  SSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           ++G I  + +V    +   SG I++F V  G  + +G+ +   +        + ++   +
Sbjct: 53  ATGRIAADKSVKLSFQ--VSGTIEQFPVGMGDFVQKGSLIAKIDGTAYQKQYEARRAQAE 110

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             + + +  +      +     + +A  + ++        Y +          +      
Sbjct: 111 MAKDNYNRVEEVYKKGSIAEVKMVEARSNYKQAEAAAQASYQNVKFTRITAPFTGYIGEK 170

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
            M+   + S     +D       L+A++      +   +      A+ + ++   E    
Sbjct: 171 MMETGDLASPGQPIVDF-FDIDKLKAIIPIPDDQVNQYQT--GDKAIVKIEVLDTEYEGE 227

Query: 225 KSTLELREN 233
            + + ++ +
Sbjct: 228 ITEISVQSD 236


>gi|94986216|ref|YP_605580.1| secretion protein HlyD [Deinococcus geothermalis DSM 11300]
 gi|94556497|gb|ABF46411.1| secretion protein HlyD [Deinococcus geothermalis DSM 11300]
          Length = 428

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/169 (7%), Positives = 56/169 (33%), Gaps = 2/169 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           ++   + +  + +  +  + +   + +   G + +   + G  +  G  ++  +D +   
Sbjct: 59  AVRGSLTVQRTVTATLKADRDSQ-VAAQTGGTVIRVLAQEGEHVRAGQVVVQLDDTQQRQ 117

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +D  ++ ++  + ++D  ++             +A E+   Q         +    +  
Sbjct: 118 ALDNARLQLRQAQINLDQTRTNTSQATASLQAAVQAAEAN-LQKARQDAASAANLYALGG 176

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              + +  +   +      +   R +L       +  L+  Q  +   +
Sbjct: 177 ISQADLAAARSAQAQAESQLAQARNNLAQNGRGGQGSLALLQVQVETAQ 225



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 79/259 (30%), Gaps = 22/259 (8%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
               + +++     L+   D++ +A         + ++    R  Q++  L       + 
Sbjct: 60  VRGSLTVQRTVTATLKADRDSQVAAQTGGTVIRVLAQEGEHVRAGQVVVQLDDTQQRQA- 118

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           + N  +      + +  TR  +       L+       A L   ++D     NL+    +
Sbjct: 119 LDNARLQLRQAQINLDQTRTNTSQAT-ASLQAAVQAAEANLQKARQDAASAANLYALGGI 177

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           SQ DL        ++  +L                   +A    A   +     L   Q 
Sbjct: 178 SQADLAAARSAQAQAESQLA------------------QARNNLAQNGRGGQGSLALLQV 219

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 + +   E+   +  + +P AG +          +A Q  P+ ++V         
Sbjct: 220 QVETAQAGVRQAEENLARTQVRAPFAGVLASLAVD-EGEFAAQGSPVFRLV-GEGSLKAT 277

Query: 332 AKVTPKQIQHVKKGYTATV 350
             VTP   + +  G    +
Sbjct: 278 FNVTPGDARALTPGTQVNL 296


>gi|258592661|emb|CBE68970.1| Biotin/lipoyl attachment:Secretion protein HlyD precursor [NC10
           bacterium 'Dutch sediment']
          Length = 391

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 79/277 (28%), Gaps = 52/277 (18%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +  ++ F+  ++     L      + +        E   +L R     +Q       +
Sbjct: 88  LATLENQDFHEQVAQAEHDLARTAADLVANDAAIRQAEANRALARKNYERYQ-------S 140

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L ++ AVS+ D  Q+E     +   +   + ++ ++ +                 K+ S 
Sbjct: 141 LSQEGAVSRLDFEQKENEHIAAQEAVNTLLAQRTSLEKQ---------------QKKASA 185

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +L   +    D                + +   G +V  +     +      P+ +I   
Sbjct: 186 NLNFAKAKLTD--------------TMVHASCDGVVVTREV-EVGDAVVAGAPIFRIA-D 229

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
               ++RA V       +  G  A V         E+     + +++    +        
Sbjct: 230 CHTIWVRAHVDETVAGAIAVGQPARVIL---RSRPEQSLPGQVVRVEVESDRVTEEKAVN 286

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
             + V   I  +           G  AEV       T
Sbjct: 287 VTFSVPSSIPPI-----------GEQAEVYIITGQKT 312



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 46/161 (28%), Gaps = 14/161 (8%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
              +   +++            +G +    V+   ++ +G  L T E+ +  + +   + 
Sbjct: 51  GVGTVEAKVVVSIGSKI-----TGRVTALNVDQPDRVRKGQLLATLENQDFHEQVAQAEH 105

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +      +    +A+        +  K +E           +  S    V         
Sbjct: 106 DLARTAADLVANDAAIRQAEANRALARKNYE---------RYQSLSQEGAVSRLDFEQKE 156

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                    + ++   R  LE +     A L+  +  LT  
Sbjct: 157 NEHIAAQEAVNTLLAQRTSLEKQQKKASANLNFAKAKLTDT 197


>gi|281212353|gb|EFA86513.1| hypothetical protein PPL_00308 [Polysphondylium pallidum PN500]
          Length = 1494

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 63/212 (29%), Gaps = 3/212 (1%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            +          +  +K   +  R   + E+  L       +    A E+ +++L +    
Sbjct: 850  MRLSQEAEQKRLAEEKRVAEEKRVAEEAEQKRLAEEKRLAEEKRLAEEAEQKRLAEEKRL 909

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                  K               +  R+      +   E K     A      ++  + + 
Sbjct: 910  AEEAEQKRLAEEKRLAEEKRVAEEKRLAEEAEQKRLAEEKRVAEEAEQKRLAEEKRVAEE 969

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK---E 261
              +K    +  L +++R+  +  +   + + E+    R   E         A   +   E
Sbjct: 970  AEQKRLAEEKRLAEEKRLAEEKRVAEEKRLAEEAEQKRLAEEKRLAEEKRLAEEKRLAEE 1029

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              +     ++  A+E  +  + E+ R  +   
Sbjct: 1030 AEQKRLAEEKRLAEEAEQKRLAEEKRLAEEKR 1061



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 75/212 (35%), Gaps = 12/212 (5%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E  E   L + K+V+ + L      +K   +      +  +K     +    +   K  +
Sbjct: 627 EAAEQRRLAEEKRVAEEKLAAEQAEQKRLAEEKRLAEEAEQKRVTEEKRVAYEAEQKRLA 686

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              +V      +  + L  +  + R     R+  E + +       + QK +   K L E
Sbjct: 687 EEKRVAEEKRVAEEKRLAEEAEQKRLAEEKRVAEEKRVAD-----EAEQKRIAEEKRLAE 741

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  V++     +E+ V       ++ I E+K +        ++   E     +E  + L 
Sbjct: 742 EKRVAEEKRVAEEKRVADEAE--QKRIAEEKRVAEEKRVAEEKRVAEEKRLTEEAEQKLA 799

Query: 268 QNQR-----TFADEMSKLTILEKTREQKTILS 294
           + +R       A+E+ +  + E+ R      +
Sbjct: 800 EEKRLAEEKRVAEEVEQKRLAEEKRLADEKRA 831


>gi|133903945|ref|NP_494819.3| abnormal DYe Filling family member (dyf-14) [Caenorhabditis elegans]
          Length = 1955

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 76/199 (38%), Gaps = 10/199 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK-------- 144
             +    ++  I++++  I T +  L    +K   L K  E    QL D L          
Sbjct: 1446 EESSRSREHEIRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHDALESKEKATGLV 1505

Query: 145  -YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +  +     +    R  ++ + + R       +L  K   L        +++T  +
Sbjct: 1506 GVQDSKHRDLEEQLDRANRERELAIGKQRRTLAENENLFRKLEQLEKEREQLMREITDER 1565

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+N  S  +L   ER    +    ++   EQ+  ++     ++E+N E  N    ++
Sbjct: 1566 RLNERNRTSLEELRVSERTWKSAMTTAKKPAEEQERAVQE-QRRWEESNHEMTNRNTALT 1624

Query: 264  RDLEQNQRTFADEMSKLTI 282
            ++ ++ +    D+++++  
Sbjct: 1625 KECDRLRVEMRDQLNRMNG 1643



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 73  ENGSQILQGTPLLTFEDIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
               + L+G       D++   L +D+ +     L+  ++TE+   D  + +        
Sbjct: 544 RETQRSLKGDVAAMKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECRAKL 603

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +   E+  +   +     + +                S     T    I     ++ENK+
Sbjct: 604 DEMAEKEAELRKELAEFQAIITAMEGEGKLNQEQFLESKNELNTLTDQIESLNSEVENKN 663

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLR 242
             +R L+++ Q+    ++N+   +        +    +     E   L E ++E+   + 
Sbjct: 664 EEIRNLMATLQEKEVHIQNVRTSSHQLTATYEEANGEIDILKAELTRLHEQVNERTRQIS 723

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             NE YD+A  +    L++++   ++       E+ ++    + +E++ 
Sbjct: 724 EANEKYDDAARKNDALLEDVAT-WQEKYEQLKMELEEMNRRGQEKEREE 771



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 68/208 (32%), Gaps = 14/208 (6%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH---------S 147
           +  +      R   + E+S  + +  + D L +   S +  +                  
Sbjct: 513 EALRSKDTEERSRFEKERSEREKIRRESDELRETQRSLKGDVAAMKTDLDDKTLRLDMLE 572

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---N 204
           T        + +       +   +        ++  K + LR  L+  Q  +T M+    
Sbjct: 573 TERDELKKKLETEREQADQRDLEIAECRAKLDEMAEKEAELRKELAEFQAIITAMEGEGK 632

Query: 205 LFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           L ++  + S+N+LN     +     E+     E +N++  + E              +++
Sbjct: 633 LNQEQFLESKNELNTLTDQIESLNSEVENKNEEIRNLMATLQEKEVHIQN-VRTSSHQLT 691

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
              E+         ++LT L +   ++T
Sbjct: 692 ATYEEANGEIDILKAELTRLHEQVNERT 719


>gi|110633009|ref|YP_673217.1| polysaccharide export protein [Mesorhizobium sp. BNC1]
 gi|110283993|gb|ABG62052.1| polysaccharide export protein [Chelativorans sp. BNC1]
          Length = 427

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/185 (9%), Positives = 57/185 (30%), Gaps = 10/185 (5%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            + +  +++ +   +  I+ E      +    ++                    +    +
Sbjct: 179 AEALAEEQLRLLVKKARIEAELQGQAEIEMPEEIASDPGTP----------GILAEEKAI 228

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            +     +   L+        +      LE K       +   +K+L  + +L EK  V 
Sbjct: 229 MDARQKQLTLQLQALDDLKELLQQEISSLEKKIVTANRQVELARKELESVGSLAEKGLVV 288

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
              +   ER + +   +L +         + I++   +A       + E++ + ++ +  
Sbjct: 289 NTRVLTSERNIAEMESKLLDYETAILTARQDISKAEQDALNLKNTAVSELAVERQEVEAK 348

Query: 273 FADEM 277
             +  
Sbjct: 349 LVENR 353


>gi|57238198|ref|YP_178721.1| macrolide-specific efflux protein macA [Campylobacter jejuni
           RM1221]
 gi|86149922|ref|ZP_01068151.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88596874|ref|ZP_01100110.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|218562257|ref|YP_002344036.1| putative secretion protein HlyD [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|57167002|gb|AAW35781.1| macrolide-specific efflux protein macA [Campylobacter jejuni
           RM1221]
 gi|85839740|gb|EAQ57000.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|88190563|gb|EAQ94536.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|112359963|emb|CAL34752.1| putative secretion protein HlyD [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|284925867|gb|ADC28219.1| putative secretion protein HlyD [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315058020|gb|ADT72349.1| Macrolide-specific efflux protein MacA [Campylobacter jejuni subsp.
           jejuni S3]
 gi|315928607|gb|EFV07899.1| Macrolide-specific efflux protein MacA [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 390

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  ++ + G++  +D V ++ +  SG I K  V+ G+ + QG  +   +  +  + +D+ 
Sbjct: 42  ISQTIEAVGKVYAKDQV-DVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDIT 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +++ + +++++K AL+  N +Y   +K + ++   L +   + ++  +      ++ 
Sbjct: 101 KAQLESAKANLESKKVALEIANKQYQREQKLYAAKASSLENLETQKNNYYT--LKANVAE 158

Query: 160 VYRSLKMKLTRMRSIY 175
           +   +      +++  
Sbjct: 159 LNAQVVQLEITLKNAQ 174



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 6/167 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q +  +      K  LE+    ++++  L        E      N    +  ++ +   
Sbjct: 102 AQLESAKANLESKKVALEIANKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELNA 161

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHSKLTY 329
                   L   +K     TI +P+ G ++             +Q    IV   +     
Sbjct: 162 QVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVD-EGQTVNANQNTPTIVRIANLDEME 220

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           +R ++    +  +K G    + F    D  +K + A I  IDP  ++
Sbjct: 221 VRMEIAEADVSKIKVG--TELDFSLLND-PQKTYHAKIASIDPADTE 264


>gi|254701095|ref|ZP_05162923.1| efflux transporter, RND family, MFP subunit [Brucella suis bv. 5
           str. 513]
 gi|261751628|ref|ZP_05995337.1| efflux transporter [Brucella suis bv. 5 str. 513]
 gi|261741381|gb|EEY29307.1| efflux transporter [Brucella suis bv. 5 str. 513]
          Length = 314

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 27/193 (13%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-----------QRTFADEMSKLTI 282
           I E       I     E  L+ A   ++    L              +   A+    L  
Sbjct: 114 IAELDAETEQIAVAKAETALKDAQTTRQRIARLRATNTATEVQAVGAELAVANAQLALQD 173

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +    ++ + +PI G +      +  NY      + +I        I   V  +    +
Sbjct: 174 AQLALSRRMVRAPITGIVGILPVNA-GNYVTAQTSIARI-DDRSTVLIDIWVPERFAPQI 231

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G   T     +        K  I  +D ++ +    L       V  ++ +       
Sbjct: 232 KVGQPLTAESTAFPGEIY---KGRINAVDNMLDEASRTLH------VRAEVPNAED---- 278

Query: 403 IELRNGFPAEVLF 415
             LR G    V  
Sbjct: 279 -RLRAGMSFSVTI 290



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 3/105 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKS 115
           +    SG + K  V  G  + +G  +   +       +   + ++K+    R  I   ++
Sbjct: 89  VTPYSSGYMTKLHVRAGDTVKEGDLIAELDAETEQIAVAKAETALKDAQTTRQRIARLRA 148

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                  +    E A  + +  L D          +    GI  +
Sbjct: 149 TNTATEVQAVGAELAVANAQLALQDAQLALSRRMVRAPITGIVGI 193


>gi|149175878|ref|ZP_01854496.1| multidrug resistance protein MexA [Planctomyces maris DSM 8797]
 gi|148845325|gb|EDL59670.1| multidrug resistance protein MexA [Planctomyces maris DSM 8797]
          Length = 416

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 47/124 (37%), Gaps = 4/124 (3%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E+++  SG +++  V  G  +  G+ +           ++ +K  ++        E +  
Sbjct: 68  EVRALESGYLEEIPVREGQSVKAGSTMFRILPTLYEAKLNAEKAEVQL----AQIEYNNT 123

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + L N+  V +      E +L     +   T +++    I + +  +  K    +   ++
Sbjct: 124 ERLYNQKVVAQPEVALAEAKLAKVKARMQLTQAELDFATIKAPFEGIIDKQLHQQGSLIS 183

Query: 178 RLDL 181
             D+
Sbjct: 184 EGDI 187



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 21/188 (11%), Positives = 54/188 (28%), Gaps = 22/188 (11%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            E+  V +    +    +++    L E     +     + ++         N       +
Sbjct: 77  LEEIPVREGQSVKAGSTMFRILPTLYEAKLNAEKAEVQLAQIEYNNTERLYNQKVVAQPE 136

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI---- 321
           +   +   A   +++ + +   +  TI +P  G I   Q     +   +   L  +    
Sbjct: 137 VALAEAKLAKVKARMQLTQAELDFATIKAPFEGII-DKQLHQQGSLISEGDILTTLSDNS 195

Query: 322 -------VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
                  VP ++      K  P    ++K      ++       +       I  I+   
Sbjct: 196 VMWVYFNVPEARYL--EYKADP-DRDNIK----VELQLA--DGSKFPYI-GKIGAIEADF 245

Query: 375 SQQDNNLQ 382
           +    N+ 
Sbjct: 246 NNHTGNIS 253


>gi|77920592|ref|YP_358407.1| membrane-fusion protein, component of multidrug efflux system
           [Pelobacter carbinolicus DSM 2380]
 gi|77546675|gb|ABA90237.1| membrane-fusion protein, component of multidrug efflux system
           [Pelobacter carbinolicus DSM 2380]
          Length = 367

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 53/196 (27%), Gaps = 16/196 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             +R   ++ L                     E      N L       E          
Sbjct: 94  ALQRQEAEAALAKARAQARNAEANYARVRALYENRNASRNDLDAARAGSESANAAVKASR 153

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++L +         + +P AG I       +       Q +  +     +  +   V   
Sbjct: 154 TRLELALSQIRYTRLTAPTAGAIASVPV-EAGENVGAGQVVAVLT-AGAMPEVSVAVPES 211

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            I  +++G   TVRF              + ++  +         T   Y V ++     
Sbjct: 212 LIADIEQGGEVTVRFDALPQRSF------VGRVTEVGVAATTYATT---YPVTVR----- 257

Query: 398 FSDNNIELRNGFPAEV 413
            + +N  +R G  AEV
Sbjct: 258 LARDNSAIRPGMAAEV 273


>gi|16262934|ref|NP_435727.1| NolF secretion protein [Sinorhizobium meliloti 1021]
 gi|307315475|ref|ZP_07595033.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           BL225C]
 gi|307322206|ref|ZP_07601576.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           AK83]
 gi|17380411|sp|P25196|NOLF_RHIME RecName: Full=Nodulation protein nolF
 gi|14523579|gb|AAK65139.1| NolF secretion protein [Sinorhizobium meliloti 1021]
 gi|306892159|gb|EFN22975.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           AK83]
 gi|306898783|gb|EFN29440.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           BL225C]
          Length = 367

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 58/178 (32%), Gaps = 13/178 (7%)

Query: 206 FEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           FE+ A+ S     + E     +  EL E + E+   L       +   L     + ++  
Sbjct: 100 FERGALESAVTGRKAEADALSAQTELAEAVLERNTRLGERGAASEATRLAALADVLDLRA 159

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L   Q   +D        E++     + +   G ++  +S         +  LM IV  
Sbjct: 160 QLRSKQAEVSD-------AERSLSHAEVRAEF-GGVIAARSVEEGQTVPLNTQLMTIVEL 211

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           +    + A V   +I  ++   +  +    +       F   + +I P        ++
Sbjct: 212 N-RLEVDAGVPTSRIPLIRLKQSVELTVEGFPGRT---FSGEVARISPTADAGSRAVR 265



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 46/154 (29%), Gaps = 1/154 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V   G +        + S  S  I +  V+ G  +  G  L+ FE       +  +K   
Sbjct: 58  VRIVGSLTPI-RRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRFERGALESAVTGRKAEA 116

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             L    +  ++ L+      +    +  +R   L D L       SK      +    S
Sbjct: 117 DALSAQTELAEAVLERNTRLGERGAASEATRLAALADVLDLRAQLRSKQAEVSDAERSLS 176

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                     +   R   E ++  L   L +  +
Sbjct: 177 HAEVRAEFGGVIAARSVEEGQTVPLNTQLMTIVE 210


>gi|103488027|ref|YP_617588.1| secretion protein HlyD [Sphingopyxis alaskensis RB2256]
 gi|98978104|gb|ABF54255.1| Secretion protein HlyD [Sphingopyxis alaskensis RB2256]
          Length = 490

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 57/195 (29%), Gaps = 39/195 (20%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEM----SKLTILEKTREQK---TILSPIAGTIVYN 303
           A  EF   L+   R L    R     +    S +  +E++  Q+   TI SPI GTI   
Sbjct: 167 AQAEFLAVLRTGDRALASAARQRLVLLGMPQSTIAAVERSGRQRNVITINSPIGGTIKSL 226

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                       Q L + V      ++ A V       ++     T     Y     + F
Sbjct: 227 GVR-QGMSVMAGQTLAE-VNGLGTVWLDAAVPEAMAGRLRPDMPVTATLAAYP---GESF 281

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF-------------- 409
              I  I P    +   +         ++I      +    LR G               
Sbjct: 282 AGRIRAILPQAETESRTIT------ARVEIP-----NRGGRLRPGMFATVSFAGEQRPAL 330

Query: 410 --PAEVLFTAKNTTL 422
             P+E L      TL
Sbjct: 331 LVPSEALIRTGKRTL 345



 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 18/40 (45%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           + NV+ I SP  G IK   V  G  ++ G  L     + T
Sbjct: 209 QRNVITINSPIGGTIKSLGVRQGMSVMAGQTLAEVNGLGT 248


>gi|311103921|ref|YP_003976774.1| RND family efflux transporter MFP subunit 2 [Achromobacter
           xylosoxidans A8]
 gi|310758610|gb|ADP14059.1| efflux transporter, RND family, MFP subunit 2 [Achromobacter
           xylosoxidans A8]
          Length = 362

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 23/189 (12%)

Query: 231 RENIHEQKNMLRHINELYDEA-NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           R  + + +  L      Y  +  L+   ++ + +RD  ++  T   + + + + +   ++
Sbjct: 115 RAELAQARANLTLAQSHYRRSVELQGKGFVSQQARD--ESASTLKVQEAAVALAQARLDK 172

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYT 347
            TI +P  G IV  +S S  +Y  Q Q L    P        +  +V    +  V  G  
Sbjct: 173 MTISAPF-GGIVGLRSVSVGDYVNQGQDLA---PLEAIDPLKVDFRVPEMYLSKVGVGQQ 228

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            T+R               +  + P++     ++           +     ++ +  LR 
Sbjct: 229 LTLRMDALPGQERP---GTVYAVSPLVDAGGRSI-----------LLRATVANKDAVLRP 274

Query: 408 GFPAEVLFT 416
           G  A V   
Sbjct: 275 GMFARVQLQ 283



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 53/142 (37%), Gaps = 5/142 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P    +S+ G + ++++V  ++   +G I+    + G  + +G  L+  +D      +  
Sbjct: 62  PFARGISAVGSLRSDESV-VLRPEVAGRIQSIDFKEGQPVKRGDVLIRLDDSVPRAELAQ 120

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            + ++   + H          L  K  V ++A +     L           +++    IS
Sbjct: 121 ARANLTLAQSHY----RRSVELQGKGFVSQQARDESASTLKVQEAAVALAQARLDKMTIS 176

Query: 159 SVYRSLKMKLTRMRSIYLNRLD 180
           + +  +    +     Y+N+  
Sbjct: 177 APFGGIVGLRSVSVGDYVNQGQ 198


>gi|307824774|ref|ZP_07654997.1| conserved hypothetical protein [Methylobacter tundripaludum SV96]
 gi|307734132|gb|EFO04986.1| conserved hypothetical protein [Methylobacter tundripaludum SV96]
          Length = 444

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 56/139 (40%), Gaps = 13/139 (9%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           H  WK   ++               I GL+  +   P+  SV +  E++       +++P
Sbjct: 167 HKPWKERIQDRKRP---------FIIGGLVLAAAFFPVRQSVLAEAEVIPHQPN-LVRAP 216

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS--IKNLRCHIDTEKSALD-F 119
             G+++ F V+   ++  G  L + +  +    + + + +  I        T+++ LD  
Sbjct: 217 LEGVVENFYVQPNEEVSAGQKLFSLDTTQLQSRLKVAEETRDIAQTEYLQMTQQALLDPT 276

Query: 120 LNNKYDVLEKAFESREEQL 138
           +  K   L+  ++ +  ++
Sbjct: 277 VKAKLAGLKSKWDQQAAEV 295


>gi|301162592|emb|CBW22139.1| putative HlyD-family transporter component [Bacteroides fragilis
           638R]
          Length = 415

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 74/213 (34%), Gaps = 17/213 (7%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G+++  + ++ + +   G +++   E G+ +  G  +L   +       +++   +
Sbjct: 62  IRVIGQVMP-NRIIYMDAIEGGRVEERLKEEGAIVKAGDVILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++  ++N R  ++ E   L       +  E A + R  +    L K      + F   
Sbjct: 121 AYQENELRNTRISMEQEHLRLKQERIGLN-KELAVKQRRYEQYSRLIKEQLIAQEEFRLA 179

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                 +          I  +    E++ S L   + + ++ L +++         + + 
Sbjct: 180 AEEYEAARAQLEVIDERIRQDNFFRESQISSLDENIRNMKRSLALVRE--------RVEN 231

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            + +  +      L   I +      HI ++  
Sbjct: 232 LKVKAPIDGQVGNLDAQIGQSIAAGEHIGQIIT 264



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 66/202 (32%), Gaps = 25/202 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+    L L+ +   L   L+  Q+       L +
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQEHLRLKQERIGLNKELAVKQRRYEQYSRLIK 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  ++Q +          +  +L             I+E   + N    + +  +  ++ 
Sbjct: 168 EQLIAQEEFRLAAEEYEAARAQLE-----------VIDERIRQDNFFRESQISSLDENIR 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+ A    +        E   + +PI G +    +          + + +I+     
Sbjct: 217 NMKRSLALVRER-------VENLKVKAPIDGQVGNLDA-QIGQSIAAGEHIGQIITPD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTAT 349
             ++A +    ++ V  G  A 
Sbjct: 267 LKVQALIDEYYVERVVPGLPAD 288


>gi|190894596|ref|YP_001984889.1| putative exopolysaccharide biosynthesis/export protein [Rhizobium
           etli CIAT 652]
 gi|190700257|gb|ACE94339.1| probable exopolysaccharide biosynthesis/export protein [Rhizobium
           etli CIAT 652]
          Length = 427

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 70/247 (28%), Gaps = 22/247 (8%)

Query: 44  VSSSGEILNEDNVVEIKSP--FSGIIKKFQVENGSQIL-QGTPLLTFEDIETTDLIDLKK 100
           V + GE      +  ++S     G ++    +    I   G              ID   
Sbjct: 121 VMAPGEYKFRSGLRVLQSLAMSGGPLRAAAQQQSETIKLAGEL----------REIDHAL 170

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +        + TE +    +          F+        +     +    +F    S++
Sbjct: 171 LRSAAKLARLQTEMTGAKEI---------VFDQPPAADRQYAESIFAEERVIFQARASAL 221

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            +     +     +      LE K       + S ++ LT ++ L +K     +     E
Sbjct: 222 DKQSVALVELRNLLTAEIETLEEKLKGSDDNIQSVEEQLTSVRTLVQKGLTITSRQMDLE 281

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R++     +  + +       + INE          N   E + +++  +        K 
Sbjct: 282 RLLTTYRSDRLDLVTAIMRGRQAINETKRNLEGLSDNRRSENASEVQAEKANLDQLKLKR 341

Query: 281 TILEKTR 287
              ++  
Sbjct: 342 DTTQQLL 348


>gi|145610094|ref|XP_366640.2| hypothetical protein MGG_02716 [Magnaporthe oryzae 70-15]
 gi|145017477|gb|EDK01840.1| hypothetical protein MGG_02716 [Magnaporthe oryzae 70-15]
          Length = 2396

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 77/235 (32%), Gaps = 14/235 (5%)

Query: 77   QILQGTPLL---TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAF 131
            +I +   LL      D +       ++     L      E+  +  +N   + D L    
Sbjct: 1863 RIKKEQELLARQEVLDAKLQAEARTRERLESELERLEAGERQGIRAVNECKRLDTLLAEL 1922

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN----RLDLENKSSL 187
            ++   QL     +Y     +  +     V R+     +++          R +LE++   
Sbjct: 1923 KTENHQLQQSSMRYQIEFQEARDSAAREVQRTRDAMQSQIDQANHEVNVVREELEDQVQR 1982

Query: 188  LRALLSSHQKDLTMMKN-----LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +RA L   + D    K      L +  A  + ++    R       +L+E      N   
Sbjct: 1983 VRAQLDQVKLDADTSKAKYEMLLEDAQATHKTEMETLARKHQVEIEDLQERHERIVNNTT 2042

Query: 243  HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
               +  ++  LE  +     S +L++  +   + +           +   LSP+A
Sbjct: 2043 EDAQRLEQNLLERLSISTSKSTNLQERIQHLEERLEIAKEAAAAAARAAKLSPVA 2097



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 77/211 (36%), Gaps = 21/211 (9%)

Query: 90   IETTDLIDLKKVSIKNLRCH----IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E+   I   K +I+ +R      +  +    D  N   D +E+      + +     + 
Sbjct: 1554 TESDGDISAVKKAIEEMREQFGKSLHLDFRGEDLRNIVEDAVERRMVPTPQPVAVKGQED 1613

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT---MM 202
             S          + + + L+++  ++ +  + R   E++++  +  L   +  +    M 
Sbjct: 1614 LSEKFNELQAKAADLEQRLRLEEAKVETELVLRRTAEDRAAEFQRNLEMAETKIEVEIMN 1673

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            ++++++       ++  E       L+ +E   EQ+   R   E     N        E 
Sbjct: 1674 RSVYDQ------RVHDLE-----ERLKHQEVKAEQEASARRTAEDRLAENQRLLRISSEE 1722

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               L +      ++  K+  +E+++ + T+ 
Sbjct: 1723 ETRLREA---LEEKEQKIKSIEESKGKTTMR 1750


>gi|54293424|ref|YP_125839.1| hypothetical protein lpl0473 [Legionella pneumophila str. Lens]
 gi|53753256|emb|CAH14703.1| hypothetical protein lpl0473 [Legionella pneumophila str. Lens]
          Length = 345

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 73/205 (35%), Gaps = 6/205 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              +  TL ++I  IG +T +I+      +  +      +NV  + +  SG I +  V+N
Sbjct: 19  KPKRWFTLTNVIIFIGFLT-AIIYVFSYLIPFTDNAFVVNNVRPVAALTSGYITELYVKN 77

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L T         ++     +   +  +   K+  +      +  +K ++  
Sbjct: 78  GDAVRKGQKLFTVFKKPYEYTVEQLNADLAGAQAKLAVLKATYERDLKLSENEQKIYKKL 137

Query: 135 EEQLLDFLGKYHSTCSKVF-----NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            +    +L  Y      +           +     +  L ++          EN+   ++
Sbjct: 138 AQDDQKYLKGYAIKSVSLITLQNSQQETKAAKDKWQASLKQLEIDQHQITVQENEIKSIQ 197

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQN 214
           A L + + +L +     + N V QN
Sbjct: 198 ARLKNAKVNLDLTDVYAQGNGVIQN 222



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 59/180 (32%), Gaps = 10/180 (5%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +  +  +    + K ++L+A      K     + +++K A       +   I   S + L
Sbjct: 99  VEQLNADLAGAQAKLAVLKATYERDLKLSENEQKIYKKLAQDDQKYLKGYAIKSVSLITL 158

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           + +  E K           +  ++           +   +       ++L   +   +  
Sbjct: 159 QNSQQETKAAKDKWQASLKQLEID--------QHQITVQENEIKSIQARLKNAKVNLDLT 210

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +   G I     F+       +QPL  +V      YI+A      ++ V+KG    +
Sbjct: 211 DVYAQGNGVIQNL-FFTIGTPVNINQPLFSLV-DQDNIYIQANFNETDLRDVRKGSKVLI 268


>gi|330505722|ref|YP_004382591.1| hypothetical protein MDS_4808 [Pseudomonas mendocina NK-01]
 gi|328920008|gb|AEB60839.1| hypothetical protein MDS_4808 [Pseudomonas mendocina NK-01]
          Length = 389

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 62/175 (35%), Gaps = 18/175 (10%)

Query: 18  KRMTLLS--IIGIIGLITWSILLP-------------IEISVSSSGEILNEDNVVEIKSP 62
           +R+T L   ++ ++ L  W    P             ++ +V +   +    + VE+ + 
Sbjct: 9   RRLTWLVTIVVLLLSLAGWFTRAPAIRYASEPVARGDVQATVVAMATLQP-RHSVEVGAQ 67

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I +  VE G  + +G  L   +       ++  + ++  LR     +++ LD    
Sbjct: 68  VSGQIMRLLVEPGDHVDKGQLLAEIDASLHEATVEADRAALAGLRAQQAEQQAQLDLARQ 127

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           ++   ++   +   +  D      +  S      +  +   +     R+R     
Sbjct: 128 QHRRQQRLLSAEATREEDVQIAVATLRSA--EARLQQLRAQVAEARARLRGNEAQ 180



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 81/222 (36%), Gaps = 15/222 (6%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + ++   ++ L+L    H ++  L       +E        L+     L+Q +   A+ 
Sbjct: 111 LRAQQAEQQAQLDLARQQHRRQQRLLSAEATREEDVQIAVATLRSAEARLQQLRAQVAEA 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVPHSKLTYIRAK 333
            ++L   E       + +PIAG+++                +  +M+I           +
Sbjct: 171 RARLRGNEAQLSYTRLYAPIAGSVLGVDV-KQGQTLNATYQTPTVMRIA-DLSSMTGWTR 228

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPIISQQDNNLQTQEYYE 388
           V+   I+ ++ G    + F        +++ + + ++      P  SQ + +  + E  +
Sbjct: 229 VSEADIRRLQPGLP--LYFTTLG-GDARRWHSSVRQVLPAPPVPTGSQGEASSASNETEK 285

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           V+         + + EL     A+V+F     T +  +  P+
Sbjct: 286 VVQYTVLFEVDNADGELMPQMTAQVVFVTA--TASDVLTAPL 325


>gi|309379611|emb|CBX21782.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 426

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 62/158 (39%), Gaps = 17/158 (10%)

Query: 32  ITWSILLP---------------IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
             WS L P               I  +VS++GEI    N+V + +  SG IKK  V+ G 
Sbjct: 55  GGWSYLKPEPQASYITETVRRGDISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQ 113

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           Q+ +G  +        T+ ++++K  ++  +  + + + AL     KY      ++    
Sbjct: 114 QVKKGDLIAEINSTTQTNTLNMEKSKLETYQAKLVSAQIALGSAEKKYKRQTALWKDDAT 173

Query: 137 QLLDFLG-KYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              D    +     +K     + ++ R  K+ +    S
Sbjct: 174 SKEDLESAQDALAAAKANVAELKALIRQSKISINTAES 211



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 63/212 (29%), Gaps = 21/212 (9%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQ 270
           ++ L   +  +  + + L     + K        +    E      + L     ++ + +
Sbjct: 137 KSKLETYQAKLVSAQIALGSAEKKYKRQTALWKDDATSKEDLESAQDALAAAKANVAELK 196

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLT 328
                    +   E       I + + GT+V             +Q    I+  +   + 
Sbjct: 197 ALIRQSKISINTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSAPTIIQLANLDMM 255

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNN 380
             + ++    I  VK G    + F   ++      KA ++ +DP ++           + 
Sbjct: 256 LNKMQIAEGDITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDT 312

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                YY     +      + + +L  G   +
Sbjct: 313 ASNAVYYYARSFVP-----NPDGKLATGMTTQ 339


>gi|303246003|ref|ZP_07332285.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           fructosovorans JJ]
 gi|302492786|gb|EFL52654.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           fructosovorans JJ]
          Length = 403

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 91/270 (33%), Gaps = 19/270 (7%)

Query: 162 RSLKMKLTRMRSIYL-NRLDLENKSSLLRALLSSHQKDLTMM---KNLF--EKNAVSQND 215
           RS   ++    S+ L +++    +S L R   + H   L M    K+L   E+  V+  +
Sbjct: 54  RSFPAEVESQNSVTLASKVSGAVESVLAREGDALHAGQLIMRIDDKDLTSQEQGLVASKE 113

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              +ER    +   L +   E+   L     +  E   +  +  + ++R +E        
Sbjct: 114 QISRERQSLLAKASLAKTTMERMRRLLAQRVVSQEDFDKAQSEYESLTRQVEAAAAQENT 173

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             +K   L   R    I +P  G I+  +      +     PL  +        + A+V 
Sbjct: 174 VTAKAGELAALRAYTRITAPFDG-ILARRYVDQGAFVTAGSPLALVDQSGGGFELAAQVD 232

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              +  +++G T     P  A          +  +  I+ + D   +T   +++   + D
Sbjct: 233 ESLLAGLRQGQTILAVVPALAPAPF------VVTVSAIVGRVDPASRT---FKLKCALPD 283

Query: 396 LAFSDNNIELRNGFPAEVLF--TAKNTTLA 423
            A    +   R G    V          L 
Sbjct: 284 -AVPGADGPPRAGMFGRVFVPARTAEKLLL 312



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 47/161 (29%), Gaps = 14/161 (8%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   N V + S  SG ++      G  +  G  ++  +D + T        S + +    
Sbjct: 60  VESQNSVTLASKVSGAVESVLAREGDALHAGQLIMRIDDKDLTSQEQGLVASKEQISRER 119

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            +  +         + + +    R     DF                 S Y SL  ++  
Sbjct: 120 QSLLAKASLAKTTMERMRRLLAQRVVSQEDF-------------DKAQSEYESLTRQVEA 166

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQK-DLTMMKNLFEKNA 210
             +          + + LRA        D  + +   ++ A
Sbjct: 167 AAAQENTVTAKAGELAALRAYTRITAPFDGILARRYVDQGA 207


>gi|312113047|ref|YP_004010643.1| secretion protein HlyD [Rhodomicrobium vannielii ATCC 17100]
 gi|311218176|gb|ADP69544.1| secretion protein HlyD family protein [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 362

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 100/306 (32%), Gaps = 11/306 (3%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                       +   +     +  + +L    ++      +F      +   L     +
Sbjct: 51  AAAAPGRVEPKGRELRIAAPMPAAIKDVLVSADEHVKKGDLLFRLDDGELAARLAAFEAQ 110

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +     +R D + K + L       +K    + +   +   ++ DL+             
Sbjct: 111 VAVKLADRDDAKVKGAALD-----RRKAEDAVYDAEREAFETRMDLDAALANRKLYKAS- 164

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             ++ + +  +    +  +    +     +     L + +   A   +++T +    E+ 
Sbjct: 165 EADVAKARTAVSTAADRVERERQKLRRVEERDLPKLTREEAALAAARAEVTGVAANLERL 224

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +P   T++   + +    A    PL+ +   S+    RA+V  + ++ V  G  A V
Sbjct: 225 RVRAPADATVLKVDART-GEMAAAVAPLILLG-DSEHMQARAEVEERDVRKVFVGQRAIV 282

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           +   + D       A + K   + S +  +   +++ +V +    L        L  G  
Sbjct: 283 KSEAFPDRIFDARVATMAK--TLGSPELTSRGPRKHTDVDILEVVLDMDPGG-PLLPGMR 339

Query: 411 AEVLFT 416
            +V+F 
Sbjct: 340 VDVMFR 345



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 48/145 (33%), Gaps = 3/145 (2%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           + ++ G +  +   + I +P    IK   V     + +G  L   +D E    +   +  
Sbjct: 51  AAAAPGRVEPKGRELRIAAPMPAAIKDVLVSADEHVKKGDLLFRLDDGELAARLAAFEAQ 110

Query: 103 IK---NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +      R     + +ALD    +  V +   E+ E ++       +    K     ++ 
Sbjct: 111 VAVKLADRDDAKVKGAALDRRKAEDAVYDAEREAFETRMDLDAALANRKLYKASEADVAK 170

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENK 184
              ++     R+         +E +
Sbjct: 171 ARTAVSTAADRVERERQKLRRVEER 195


>gi|258544652|ref|ZP_05704886.1| macrolide-specific efflux protein MacA [Cardiobacterium hominis
           ATCC 15826]
 gi|258520070|gb|EEV88929.1| macrolide-specific efflux protein MacA [Cardiobacterium hominis
           ATCC 15826]
          Length = 400

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 20/201 (9%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E ++N + Q+ +++      +  +   A+ LK     +EQ +        +L        
Sbjct: 133 EAQQNFNRQQELVKKGAAARESLDAAQAS-LKSAQSAVEQAKADIRKSQLELDNAGLRLG 191

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
             ++ +P+ G ++              Q  P +  +  +    + A++    +  V+ G 
Sbjct: 192 YTSVTAPMDGVVISVAV-EKGQTVNAVQDSPTLVTLAQTNTMTVEAEIAEADVGAVQPGM 250

Query: 347 TATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAF 398
            A   F      +  +F+  ++ IDP          S   ++  T  YY   + +     
Sbjct: 251 AAY--FTLLGADKT-RFEGKLKSIDPAPLATSKNTTSASSSSNDTAVYYYGKMDVP---- 303

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
            + + +LR G  A ++   + 
Sbjct: 304 -NPDGKLRIGMTANMVINVRE 323



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 55/189 (29%), Gaps = 22/189 (11%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEIS------------------VSSSGEIL 51
            ++  A ++ +  L I+   G   W      + +                  V +SG + 
Sbjct: 7   SQSGRAGMRFLVFLVIVAAAGYAWWHFRDKPDEAGAIKFITAEVKSGDVAQTVLASGSLQ 66

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE---DIETTDLIDLKKVSIKNLRC 108
              +V  + +  SG I    V+ G ++  G  +   +      T D       S K    
Sbjct: 67  PFKSVK-VGAQVSGEISALFVQVGDKVKAGDRIAEIDASTQQNTRDSAAAALASSKAALS 125

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
               +        N+   L K   +  E L        S  S V           L++  
Sbjct: 126 AAQAKLREAQQNFNRQQELVKKGAAARESLDAAQASLKSAQSAVEQAKADIRKSQLELDN 185

Query: 169 TRMRSIYLN 177
             +R  Y +
Sbjct: 186 AGLRLGYTS 194


>gi|255282093|ref|ZP_05346648.1| efflux transporter [Bryantella formatexigens DSM 14469]
 gi|255267412|gb|EET60617.1| efflux transporter [Bryantella formatexigens DSM 14469]
          Length = 509

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/400 (11%), Positives = 127/400 (31%), Gaps = 38/400 (9%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    I ++   SG +              G ++K  VE G Q+  G  L  ++      
Sbjct: 52  AFTGSIAVTTEGSGYVEAASTKALALEYD-GKLEKIYVETGDQVTAGETLAVYDTDALDT 110

Query: 95  LIDLKKVSIKNLRCHIDT-EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV- 152
           +I+ K+  ++ +   I   + S    +        K   +  + ++  + + +   +++ 
Sbjct: 111 VIEQKETELEEINSTIAATDDSGSTTITAPVSGRVKRIYASADDMVSSVVENNGGLAEIS 170

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLN-----------RLDLENKSSLLRALLSSHQKDLTM 201
            +  +   +      LT   S+ +             +D E     ++           +
Sbjct: 171 ADGRLKVEFTCTDTALTEGDSVTVEFDSYSVEGTVAEVDGEQVCVTIQDDTEYKVDTTAV 230

Query: 202 MKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           ++   +  A + +  L      +  +   + ++++  +    +  +        F     
Sbjct: 231 IRG--KSGAKLGEGTLLSNHPYLVTAEYGIIDSVNVTRETYVNAGDTM------FERREA 282

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           E ++          + + +L  L+  ++   + S   G IV           ++ Q    
Sbjct: 283 EYNQTYLDLLSQREELVEELQELKAYQKNPVVTSDYDGYIVTLDVL-EGMTYEKDQQFCT 341

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           I   ++   ++ ++    I  V+ G  A+V F  + +      +  +EKI  + +     
Sbjct: 342 IA-DAETLNLKVEIDELDIDGVEVGQKASVVFDAFEEETY---EGTVEKISGVGTNTGGV 397

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                              + +  L+N   A    T ++ 
Sbjct: 398 TTYTV----------TISMEGDTHLKNAMSATASITLESK 427



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 57/183 (31%), Gaps = 32/183 (17%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS--- 307
           A    A Y  +    + + + T  +E++            TI +P++G +    + +   
Sbjct: 96  AGETLAVYDTDALDTVIEQKETELEEINSTIAATDDSGSTTITAPVSGRVKRIYASADDM 155

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
            S+  + +  L +I        +    T      + +G + TV F  Y+       +  +
Sbjct: 156 VSSVVENNGGLAEIS-ADGRLKVE--FTCTDTA-LTEGDSVTVEFDSYS------VEGTV 205

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ--- 424
            ++D           T+      +  T +    +  +L               TL     
Sbjct: 206 AEVDGEQVCVTIQDDTEY----KVDTTAVIRGKSGAKL------------GEGTLLSNHP 249

Query: 425 EII 427
            ++
Sbjct: 250 YLV 252


>gi|222053958|ref|YP_002536320.1| efflux transporter, RND family, MFP subunit [Geobacter sp. FRC-32]
 gi|221563247|gb|ACM19219.1| efflux transporter, RND family, MFP subunit [Geobacter sp. FRC-32]
          Length = 418

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 85/280 (30%), Gaps = 49/280 (17%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E   D +       S       +S+  S+    +      +   +  N+    +  L+  
Sbjct: 101 EANADRIAHVSPRISGKIVAVKASLGDSVASGQSLATLDSIELGEALNRYQQSKTKLALA 160

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q ++  +K L EK   ++ D+ Q E     +  EL  +                      
Sbjct: 161 QSNMDRIKALVEKKIAARKDILQAETDYKTAQTELHTD---------------------- 198

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                      E+    +    S L      + +  + SPI G I    +      A  S
Sbjct: 199 -----------EERLSLYGVSASDLKGDGHKKPRLPVRSPIGGIITEKHAI-VGELADPS 246

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + L   V      ++   +  K +  V++G  A V    + D +    K  I  I  ++ 
Sbjct: 247 KSL-YTVADLSSVWVLVDIHEKDLAKVRRGQPAIVSVGAFPDQK---LKGRITYIADLVD 302

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +    +      +  +++ +        +L+    A V  
Sbjct: 303 ETTRTV------KARIEVPNPGR-----KLKPEMFATVEL 331



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 2/122 (1%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
           PI   +S++G++    + +   SP  SG I   +   G  +  G  L T + IE  + ++
Sbjct: 89  PIAGMISATGKVEANADRIAHVSPRISGKIVAVKASLGDSVASGQSLATLDSIELGEALN 148

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S   L     +    +  L  K     K     E        + H+   ++  YG+
Sbjct: 149 RYQQSKTKL-ALAQSNMDRIKALVEKKIAARKDILQAETDYKTAQTELHTDEERLSLYGV 207

Query: 158 SS 159
           S+
Sbjct: 208 SA 209


>gi|206580823|ref|YP_002236345.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Klebsiella
           pneumoniae 342]
 gi|288933332|ref|YP_003437391.1| efflux transporter RND family, MFP subunit [Klebsiella variicola
           At-22]
 gi|290511618|ref|ZP_06550987.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Klebsiella sp.
           1_1_55]
 gi|226706827|sp|B5XSP8|AAEA_KLEP3 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|206569881|gb|ACI11657.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Klebsiella
           pneumoniae 342]
 gi|288888061|gb|ADC56379.1| efflux transporter, RND family, MFP subunit [Klebsiella variicola
           At-22]
 gi|289776611|gb|EFD84610.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Klebsiella sp.
           1_1_55]
          Length = 310

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 72/222 (32%), Gaps = 21/222 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q    +            +    E++      N+L  +A       + + +  L+  
Sbjct: 77  VIDQPRYQKALAEAEADVAYYQTLAQEKRVEAGRRNKLGIQAMSR--EEIDQANNVLQTV 134

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   A  ++   +     E+  I +P  G +     ++   +  +    + +V  +   Y
Sbjct: 135 EHQLAKAVASRDLARLDLERTEIRAPADGWVTNLNVYT-GEFITRGSTAVALVKEN-TFY 192

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A +   +++ V+ GY A +        +    K  ++ I   ++   ++  ++    V
Sbjct: 193 VMAYLEETKLEGVRPGYRAEI--TPLGSSKT--IKGTVDSIAAGVTNASSSSDSKGMASV 248

Query: 390 -----------ILKITDLAFSDNNIELRN-GFPAEVLFTAKN 419
                       + +  +        L   G  A V+ T K 
Sbjct: 249 DSNLEWVRLAQRVPV-RIRLDQQQGNLWPSGTTATVVITGKE 289



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 50/154 (32%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L RN   +   + L+ +  +     W        +   + +     ++V I    SG+
Sbjct: 2   KTLTRNILRTAITVILVILAFVAIFRAWVYYT----ASPWTRDARFSADIVAIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V++   + +   L   +       +   +  +   +  +  EK       NK  +
Sbjct: 58  ISQVNVKDNQLVKKDQVLFVIDQPRYQKALAEAEADVAYYQT-LAQEKRVEAGRRNKLGI 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H     V +  ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVEHQLAKAVASRDLARL 150


>gi|90022876|ref|YP_528703.1| hypothetical protein Sde_3234 [Saccharophagus degradans 2-40]
 gi|89952476|gb|ABD82491.1| secretion protein HlyD [Saccharophagus degradans 2-40]
          Length = 309

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 12/182 (6%)

Query: 206 FEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE--- 261
            E    S   DL + +  V       +  +   +  L  + +LY +    FA   K    
Sbjct: 103 LESGLESATVDLRRVQAEVESDIAAQQLALDFAERALVRVKDLYGKKAASFAELDKAKTE 162

Query: 262 ---ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
                + LEQ +        +         + TI SPI+G +V  +      +   ++P+
Sbjct: 163 HAIALQKLEQAKDRREQAQMEHKRARANLSRYTITSPISGVVVD-RYKEVGEHVD-NEPI 220

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           M++        + A         +K+G  A        +    K+KA +  +D +I    
Sbjct: 221 MRLA-QLDPLRVEAYAPASMYGKIKEGMQAE--LTPELERAGGKYKAEVILVDKVIDGPS 277

Query: 379 NN 380
           N 
Sbjct: 278 NT 279



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 45/130 (34%), Gaps = 1/130 (0%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S   G++ +  VE   +++ G  +   E    +  +DL++V    +   I  ++ ALD
Sbjct: 75  VSSAVEGVVSEIIVEKNDEVVAGDIVARLESGLESATVDLRRVQ-AEVESDIAAQQLALD 133

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           F       ++  +  +     +           +     +   R       +     L+R
Sbjct: 134 FAERALVRVKDLYGKKAASFAELDKAKTEHAIALQKLEQAKDRREQAQMEHKRARANLSR 193

Query: 179 LDLENKSSLL 188
             + +  S +
Sbjct: 194 YTITSPISGV 203


>gi|327271590|ref|XP_003220570.1| PREDICTED: liprin-alpha-4-like [Anolis carolinensis]
          Length = 1199

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 67/202 (33%), Gaps = 3/202 (1%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E  +L++ +   +   +  +    +++  L        +     EE    +        
Sbjct: 233 VELQELLEKQNFELAQAKERLVALAASVAELEEDLSTARRDLIKSEEMSSKYQRDLREAL 292

Query: 150 SKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++       I+++ +          SI+     LEN+ +   +L    ++    ++ L E
Sbjct: 293 AQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLE 352

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                     ++   + +   EL + I          +   +E   +    L+E +++L 
Sbjct: 353 LAEQKLQQTIRKAETLPEVEAELAQRIAALTKAEER-HGSIEERLRQLETQLEEKNQELA 411

Query: 268 QNQRTFADEMSKLTILEKTREQ 289
           + ++           L  T ++
Sbjct: 412 RARQREKMNEEHNKRLSDTVDR 433



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 63/206 (30%), Gaps = 6/206 (2%)

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE--KAFESREEQLLD 140
            L   E + +     L+   +K          S ++ L     + E  KA + +  + L 
Sbjct: 114 LLEHLECLVSRHERSLRMTVVKRQAQSPSGVSSEVEVLKALKSLFEHHKALDEKVRERLR 173

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
              +  +T  +  +     +    +    R   +  +    E K    + L         
Sbjct: 174 ASLERVATLEEQLSSAHQQISALQQGLSQREAPVGEDEKKPEGKELGQKKLWKDEASRTV 233

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            ++ L EK         ++   +  S  EL E++   +  L       +E + ++   L+
Sbjct: 234 ELQELLEKQNFELAQAKERLVALAASVAELEEDLSTARRDLIK----SEEMSSKYQRDLR 289

Query: 261 EISRDLEQNQRTFADEMSKLTILEKT 286
           E     E  +        +    ++ 
Sbjct: 290 EALAQKEDMEERITTLEKRYLAAQRE 315


>gi|240124049|ref|ZP_04737005.1| MacA [Neisseria gonorrhoeae PID332]
 gi|268682674|ref|ZP_06149536.1| periplasmic protein [Neisseria gonorrhoeae PID332]
 gi|268622958|gb|EEZ55358.1| periplasmic protein [Neisseria gonorrhoeae PID332]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++++
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLNME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQTALWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 63/212 (29%), Gaps = 21/212 (9%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQ 270
           ++ L   +  +  + + L     + K        +    E      + L     ++ + +
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQTALWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLT 328
                    +   E       I + + GT+V             +Q    IV  +   + 
Sbjct: 162 ALIRQSKISINTAESDLGYTRITATMDGTVVAIPV-EEGQTVNAAQSTPTIVQLANLDMM 220

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNN 380
             + ++    I  VK G    + F   ++      KA ++ +DP ++           + 
Sbjct: 221 LNKMQIAEGDITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDT 277

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                YY     +      + + +L  G   +
Sbjct: 278 ASNAVYYYARSFVP-----NPDGKLATGMTTQ 304


>gi|190410719|ref|YP_001966058.1| putative membrane-bound metal-dependent hydrolase [Thermus sp. 4C]
 gi|148608593|gb|ABQ95613.1| putative membrane-bound metal-dependent hydrolase [Thermus sp. 4C]
          Length = 544

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 61/187 (32%), Gaps = 29/187 (15%)

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK----SSLLRALLSSH 195
           D + +      +V    +  +    + K      +       E +       LR  LS  
Sbjct: 380 DRVEEGEPIARRVDEAPLRDLEDQAQAKAEEAARLEGELSRAEERCRAERKALRGELSRL 439

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           + ++  ++ L  + A +   L + E  + ++   L     +       + E   EA L  
Sbjct: 440 RDEVGRLRYLVAQGAEAPLRLAEGEARLEEAEARLTRLALDCAGEKARLEEAIREARLAQ 499

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L+                       E+  E + + SP++G +V  +        +  
Sbjct: 500 ARLLRRK---------------------ERAAEAQLVRSPVSGRVVEVKVRD----LRPG 534

Query: 316 QPLMKIV 322
           + ++++V
Sbjct: 535 EMVVEVV 541



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 52/152 (34%), Gaps = 6/152 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+ G ++ +G P+    D      ++ +  +       ++ E S  +    +   
Sbjct: 371 LSGLLVKPGDRVEEGEPIARRVDEAPLRDLEDQAQAKAEEAARLEGELSRAEE---RCRA 427

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             KA      +L D +G+     ++     +       +++    R   L RL L+    
Sbjct: 428 ERKALRGELSRLRDEVGRLRYLVAQGAEAPLRLAEGEARLEEAEAR---LTRLALDCAGE 484

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
             R   +  +  L   + L  K   ++  L +
Sbjct: 485 KARLEEAIREARLAQARLLRRKERAAEAQLVR 516


>gi|163644331|ref|NP_001106204.1| ventricular myosin heavy chain [Danio rerio]
          Length = 1938

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 76/197 (38%), Gaps = 5/197 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                    + +   L+  I+     L+  N     L+K   + ++ L ++  K+  + ++
Sbjct: 1409 VNAKCSSLEKTKHRLQNEIEDLMVDLERSNAAAAALDKKQRNFDKVLSEWKQKFEESQAE 1468

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            + +    +  R L  +L ++++ Y   LD       ++    + Q++++ +     +   
Sbjct: 1469 LESSQKEA--RCLSTELFKLKNSYEEALD---HLETMKRENKNLQEEISDLTEQLGEGGK 1523

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            S ++L +  + + +   E++  + E +  L H       A LEF+    +I R L +   
Sbjct: 1524 SIHELEKMRKQLEQEKSEIQSALEEAEASLEHEEGKILRAQLEFSQIKADIERKLAEKDE 1583

Query: 272  TFADEMSKLTILEKTRE 288
                    L     T +
Sbjct: 1584 EMEQSKRNLQRTIDTLQ 1600



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 77/214 (35%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   LR  +D   S ++ +      LEK   S E+Q+ ++  KY
Sbjct: 1208 QIDNLQRVKQKLEKEKS--ELRLELDDVVSNMEHVVKTKANLEKMTRSLEDQMNEYKTKY 1265

Query: 146  HSTCS---------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                                   + R L+ K + +  +  +++    +   L+  L    
Sbjct: 1266 EEGQRCINDFTMQKSKLQSENGELSRQLEEKDSLVSQLTRSKMSYTQQIEDLKRQLEEET 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K  + + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1326 KAKSALAHAVQSARHDTDLLREQYEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L+E  + L Q  +   + +  +     + E+ 
Sbjct: 1386 EELEEAKKKLAQRLQETEEAVEAVNAKCSSLEKT 1419



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 76/202 (37%), Gaps = 5/202 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E+   ++  +   + L   +   K++ +   +  + +++  ++ +E++ D   +      
Sbjct: 1464 ESQAELESSQKEARCLSTELFKLKNSYEEALDHLETMKRENKNLQEEISDLTEQLGEGGK 1523

Query: 151  KVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFEK 208
             +  + +  + + L+ + + ++S +      LE  +  +LRA L   Q    + + L EK
Sbjct: 1524 SI--HELEKMRKQLEQEKSEIQSALEEAEASLEHEEGKILRAQLEFSQIKADIERKLAEK 1581

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            +   +      +R +      L      +   LR I +  +    E    L + +R   +
Sbjct: 1582 DEEMEQSKRNLQRTIDTLQSSLESETRSRNEALR-IKKKMEGDLNEMEIQLSQANRQAAE 1640

Query: 269  NQRTFADEMSKLTILEKTREQK 290
             Q+      + +   +   +  
Sbjct: 1641 AQKQLKSVHAHMKDAQLQLDDS 1662



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 70/228 (30%), Gaps = 31/228 (13%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            +        + +++     ++ E     ++ L+F   K D+  K  E  EE  ++   + 
Sbjct: 1534 QLEQEKSEIQSALEEAEASLEHEEGKILRAQLEFSQIKADIERKLAEKDEE--MEQSKRN 1591

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                       + S  RS    L   + +  +  ++E + S      +  QK L  +   
Sbjct: 1592 LQRTIDTLQSSLESETRSRNEALRIKKKMEGDLNEMEIQLSQANRQAAEAQKQLKSVHAH 1651

Query: 206  FEKNAVSQNDLNQQ-----------ERIVYKSTLELRENIHEQKNMLRHINELYDE---- 250
             +   +  +D  +            ER       EL E     +   R       E    
Sbjct: 1652 MKDAQLQLDDSLRTNEDLKENTAIVERRNNLLQAELEELRAALEQTERGRKLAEQELLDT 1711

Query: 251  ---------ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                      N    N  K++  D+ Q Q    + + +    E+  ++
Sbjct: 1712 SERVQLLHSQNTSLLNQKKKLETDISQLQTEVEEAVQECRNAEEKAKK 1759



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/181 (10%), Positives = 55/181 (30%), Gaps = 6/181 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E  ++ +  + +       I+  K            LE+A    E        K   + +
Sbjct: 1144 ELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATAATLRKKQADSVA 1203

Query: 151  KV------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            ++             + +        +  +  N   +    + L  +  S +  +   K 
Sbjct: 1204 ELGEQIDNLQRVKQKLEKEKSELRLELDDVVSNMEHVVKTKANLEKMTRSLEDQMNEYKT 1263

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             +E+     ND   Q+  +     EL   + E+ +++  +         +  +  +++  
Sbjct: 1264 KYEEGQRCINDFTMQKSKLQSENGELSRQLEEKDSLVSQLTRSKMSYTQQIEDLKRQLEE 1323

Query: 265  D 265
            +
Sbjct: 1324 E 1324



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 72/224 (32%), Gaps = 19/224 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    L+    +  +  + +  K   I  L   I+ E++    L  K   L+   
Sbjct: 1058 EGDLKLTQESLMDLENDKQQLEERLKKKDFEISQLNGKIEDEQTICIQLQKKLKELQARI 1117

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE+L            +     ++     +  +L         ++++  K       
Sbjct: 1118 EELEEELEAERAARAKVEKQ--RADLARELEEISERLEEAGGATAAQIEMNKKREAEFQK 1175

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            L    ++ T+                   +    S  EL E I   + + + + +   E 
Sbjct: 1176 LRRDLEEATLQHEATA---------ATLRKKQADSVAELGEQIDNLQRVKQKLEKEKSEL 1226

Query: 252  NLEFANYLK------EISRDLEQNQRTFADEMSKLTILEKTREQ 289
             LE  + +       +   +LE+  R+  D+M++     +  ++
Sbjct: 1227 RLELDDVVSNMEHVVKTKANLEKMTRSLEDQMNEYKTKYEEGQR 1270


>gi|330991771|ref|ZP_08315721.1| hypothetical protein SXCC_01677 [Gluconacetobacter sp. SXCC-1]
 gi|329761239|gb|EGG77733.1| hypothetical protein SXCC_01677 [Gluconacetobacter sp. SXCC-1]
          Length = 328

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 36/137 (26%), Gaps = 12/137 (8%)

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGY 346
           +  TI +P+AG I   +             +  ++ P      I       Q   +  G 
Sbjct: 182 DDMTIRAPVAGRI-EYRIVEQGAVLPGGGRVASLLDPTDMYLTI--FYPSLQAGQLHVGD 238

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIIS-----QQDNNLQTQEYYEVILKITDLAFSDN 401
            A +              A I  + P         +    + +  Y V L+I        
Sbjct: 239 QARITLDALHQQ---VIPATISFVSPEAQFTPKYVETTTERDKLVYRVKLRIDPATARRY 295

Query: 402 NIELRNGFPAEVLFTAK 418
              L+ G   +      
Sbjct: 296 GSVLKAGMTGDGYVRTD 312



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 7/110 (6%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
             ++G +      V +K P  G I   +   G  +  G  L   +D  T   +D  +  +
Sbjct: 37  ARANGRLELARIDVAVKYP--GRITALEFHEGDVVAAGQVLAREDDASTQASLDAARAQL 94

Query: 104 KN-----LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
                   R   + +         + D+   +   R+  + D     H T
Sbjct: 95  LAAQANVARAGAERDARQATLHLARLDLEHASTMFRQHLVSDMELSQHQT 144


>gi|323496492|ref|ZP_08101550.1| hypothetical protein VISI1226_13086 [Vibrio sinaloensis DSM 21326]
 gi|323318769|gb|EGA71722.1| hypothetical protein VISI1226_13086 [Vibrio sinaloensis DSM 21326]
          Length = 376

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 66/233 (28%), Gaps = 23/233 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   I+ +   +K        +       +   +   A     Q++    +  ++K A +
Sbjct: 99  YEAEIAKLEAQIKEASQGALGLESQLQGAKAAENQAIAERDKAQREFARYQRGYDKGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L+ + +    +   +   +   +     ++      N   A  L E           
Sbjct: 159 EQQLDTRRQAYKAAQAAVERAVSGVEQAELALDSEIGGENTTVARLLAE----------- 207

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
                  L   E   +Q  + +P  G                   P+M  V   +  Y  
Sbjct: 208 -------LRKAEFDLDQTVVRAPTDGFATQLALRPGVMAVPLPLAPVMTFVHTEEKIYTA 260

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           A      +Q +K GY A   F        K FK  +  + P I +     +  
Sbjct: 261 A-FRQNSLQRLKPGYEAEFLFRALP---GKVFKGEVIDVLPAIGESQFQARGN 309



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 47/147 (31%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G + +  VE    + +G  L   + I     I   +  IK        L   +   K+A 
Sbjct: 72  GKVIEVPVEPNKALQKGDILFKIDPIPYEAEIAKLEAQIKEASQGALGLESQLQGAKAAE 131

Query: 118 DFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           +    + D  ++ F   +       F  +   T  + +    ++V R++        ++ 
Sbjct: 132 NQAIAERDKAQREFARYQRGYDKGAFTEQQLDTRRQAYKAAQAAVERAVSGVEQAELALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                     + L A L   + DL   
Sbjct: 192 SEIGGENTTVARLLAELRKAEFDLDQT 218


>gi|237710059|ref|ZP_04540540.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229456152|gb|EEO61873.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 416

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 107/314 (34%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTCSK 151
           TD I + +V       ++D E      L  K +  E     R   +  + + +  +    
Sbjct: 45  TDNIQIAEVKDDKFMEYVDVEGLVQPILTIKVNTREGGSVDRIVGEEGNMMKQGDTLLIL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                I S+         +  +     +++E KS  L+      Q ++  ++        
Sbjct: 105 TNPDLIRSIEDQRDEWEKQRITYKEKEIEMEQKSLTLKQQTLQAQYEMERLR-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        +    + E +   +  N      +L+  + +  I ++L   + 
Sbjct: 157 -KSFGLDKEEFKMGIKSKAELQVSEDEYKYKLKNTALQMESLKHDSSVTLIRKEL--LRN 213

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  KL   E+  E   + +PI G + + +  +        + + +I        I 
Sbjct: 214 DLERESKKLKRAEERLEDLIVKAPIGGQLSFVKV-TPGQQVASGESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPI-ISQQDNNLQTQE 385
           A ++   I  +  G  ATV +    Y     K    + ++   +D +   +   N++  +
Sbjct: 272 ASLSEYYIDRITTGLPATVNYQGKRYPLKITKVVPEVKDRMFDVDLVFTGEMPENVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEQA 345


>gi|224096976|ref|XP_002189000.1| PREDICTED: intersectin 1 (SH3 domain protein) [Taeniopygia guttata]
          Length = 1717

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 86/225 (38%), Gaps = 20/225 (8%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE------------ 132
           L FE     D  +  +  ++++RC + T++  ++  N   ++                  
Sbjct: 476 LEFELEALNDKRNQLEGKLQDIRCRLSTQRQEIESTNKSRELRIAEITHLQQQLQESQQM 535

Query: 133 ----SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                 E+QLL+   K     + +    + ++ R+L+ K    + +     ++E ++   
Sbjct: 536 LGRLIPEKQLLNDQLK-QVQQNSLHRDSLLTIKRALEAKELARQQLRDQLDEVEKETRSK 594

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +      L  ++ +  K  + +    + ER+  K        + +QK   R I E  
Sbjct: 595 LQEIDIFNNQLKELREIHNKQQLQKQKSLEAERLKQKEQERKTVELEKQKEAQRRIQE-R 653

Query: 249 DEANLEFANYLKEIS--RDLEQNQRTFADEMSKLTILEKTREQKT 291
           D+  LE     +E    + ++++++   +E+ K    E   +Q+ 
Sbjct: 654 DKPRLERGQPEEEPQWPKKIQEDEKQKREELPKKKESEDKGKQEV 698



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/171 (9%), Positives = 51/171 (29%), Gaps = 7/171 (4%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIY 175
           D     ++      E R + LL+   K     +++           R  + +  ++    
Sbjct: 350 DKKRENFERGNLELEKRRQALLEQQRKEQERLAQLERAEQERKERERQEQERKRQLELEK 409

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV-----SQNDLNQQERIVYKSTLEL 230
                 E +           ++     + L  +  +      + +L  Q     +  + L
Sbjct: 410 QLEKQRELERQREEERRKEIERREAAKRELERQRQLEWERNRRQELLNQRNKEQEDIMVL 469

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
           +      +  L  +N+  ++   +  +    +S   ++ + T      ++ 
Sbjct: 470 KAKKKTLEFELEALNDKRNQLEGKLQDIRCRLSTQRQEIESTNKSRELRIA 520



 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 57/184 (30%), Gaps = 19/184 (10%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +TFED +  +         K  +  ++ ++   + L  + +  E+  + RE Q  +   +
Sbjct: 346 VTFEDKKRENFERGNLELEKRRQALLEQQRKEQERLA-QLERAEQERKERERQEQERKRQ 404

Query: 145 YHSTCS-----------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                            +           + K +L R R        LE + +  + LL+
Sbjct: 405 LELEKQLEKQRELERQREEERRKEIERREAAKRELERQRQ-------LEWERNRRQELLN 457

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              K+   +  L  K    + +L        +   +L++         + I        L
Sbjct: 458 QRNKEQEDIMVLKAKKKTLEFELEALNDKRNQLEGKLQDIRCRLSTQRQEIESTNKSREL 517

Query: 254 EFAN 257
             A 
Sbjct: 518 RIAE 521


>gi|224371794|ref|YP_002605958.1| secretion protein, HlyD family [Desulfobacterium autotrophicum
           HRM2]
 gi|223694511|gb|ACN17794.1| secretion protein, HlyD family [Desulfobacterium autotrophicum
           HRM2]
          Length = 390

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 80/241 (33%), Gaps = 21/241 (8%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           LD    +S LR   +   +         E  AVS  +  +    + ++T    + + ++ 
Sbjct: 97  LDKRQVASGLRQSEAGLAEAGKT-----ENAAVSARNAARAGADLAEATYRRYQKLFQED 151

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           +  R   E  +  +L+    L +    +   +       + ++    +++  TIL+P  G
Sbjct: 152 SATRQEFEEAEARHLQARAALAQAEAMVAAARSRVEQAQAAVSGAGVSQKDATILAPYDG 211

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +         + A    PL+ +   S    +   +    IQ V+ G    V  P     
Sbjct: 212 IVTAKMIN-LGDLASPGTPLVTL-EKSGGFQVEFLLPEHHIQAVETGQVIQVTIPALE-- 267

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +       ++ I P    +  +      + V + + +         LR+G  A V     
Sbjct: 268 KAPGITGTVKTIAPGADAKSRS------FTVKVVLPENTL------LRSGMFARVTIPVG 315

Query: 419 N 419
            
Sbjct: 316 Q 316



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/136 (9%), Positives = 37/136 (27%), Gaps = 7/136 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-------NLRCHIDTEKSAL 117
           G ++   V+ G ++ QG  L+  +  +    +   +  +              +  ++  
Sbjct: 75  GTVRGVNVKEGDRVRQGDVLVVLDKRQVASGLRQSEAGLAEAGKTENAAVSARNAARAGA 134

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D     Y   +K F+       +F                +    +            ++
Sbjct: 135 DLAEATYRRYQKLFQEDSATRQEFEEAEARHLQARAALAQAEAMVAAARSRVEQAQAAVS 194

Query: 178 RLDLENKSSLLRALLS 193
              +  K + + A   
Sbjct: 195 GAGVSQKDATILAPYD 210


>gi|209543421|ref|YP_002275650.1| RND family efflux transporter MFP subunit [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209531098|gb|ACI51035.1| efflux transporter, RND family, MFP subunit [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 344

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 69/231 (29%), Gaps = 21/231 (9%)

Query: 222 IVYKSTLELRENIHEQKNMLRH-INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            V  +T  + E   +    L          +    A   ++     EQ +  +AD ++ L
Sbjct: 87  AVASATARVNERQADLTLRLAQHQRRQQLSSASASAEEKQQFEAVAEQAKAQYADALAAL 146

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
           +      ++  + S + G +         ++A      ++++  ++  ++       +++
Sbjct: 147 SQARMNLDRTQVRSTVNGYVTNLTMR-VGDFATAGVSDIEVI-DAESYWVDGYFEETRMR 204

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT--QEYYE---------V 389
            +  G    +    YA       + I   I    +Q+           Y          V
Sbjct: 205 GIYPGALVRIDLMGYATPLWGHVETITRGISSANAQRSTQGLPLVNPVYTWVRLAQRIPV 264

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN----TTLAQEIIHPITDNWPK 436
            + I  L      I L  G  A V              + ++  +  +  +
Sbjct: 265 RVHIDAL---PAGITLAAGMTASVSIVTPEGRQPRVTLRALVAQLRQSLHR 312



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/170 (11%), Positives = 52/170 (30%), Gaps = 15/170 (8%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSS----GEILNEDNVVEIK 60
           M     R+       + +L+I  ++ L  W          ++     G++     V  I 
Sbjct: 1   MVFERARHVMRIATTLAILAIATVVVLGLWDYY------TAAPWTRNGQVRV--QVANIA 52

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG I   +V +   + +G  L + +  +    +      +   +  +    +     
Sbjct: 53  PRVSGQIVDVRVTDNQYVHRGDVLYSIDPFDFRIAVASATARVNERQADLTLRLAQHQR- 111

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             +  +   +  + E+Q  + + +            +S    +L     R
Sbjct: 112 --RQQLSSASASAEEKQQFEAVAEQAKAQYADALAALSQARMNLDRTQVR 159


>gi|158286694|ref|XP_308874.4| AGAP006884-PA [Anopheles gambiae str. PEST]
 gi|157020591|gb|EAA04254.4| AGAP006884-PA [Anopheles gambiae str. PEST]
          Length = 1464

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 97/247 (39%), Gaps = 27/247 (10%)

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G +  +   L+  ++++ T     +K  I+ L+  +D  K +++    K   +E+    +
Sbjct: 471 GMEKEKADLLVQVQELQKTAQSLDRKAEIETLQQELDEAKKSVEESAQKVAAVEQQLNEK 530

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E+QL +      S   +V            +++  + +    +  D E     L+     
Sbjct: 531 EQQLSEARTTRESLEKQVKQTEARLAESEKEIERLQNQQSEQHSKDREESVKKLQQAEEE 590

Query: 195 -----------HQKDLTMMKNL----------FEKNAVSQNDLNQQERIVYKSTLELREN 233
                       +K L + K L           + +  S  +L ++   + +   +L+E 
Sbjct: 591 LAAFRKSQSLDQEKLLELTKALDAANELHDRDRKSSEASLKELLERNNQLTEQLEQLQEK 650

Query: 234 IHEQKNMLRHINELYD---EANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTR 287
           + +     + I E  +    AN + A  LK++ ++++Q    ++T  +E+  L I+ +  
Sbjct: 651 LDKTSGKQKKIQEEKNGLRAANDDLAKELKQVRQEMKQLTAQKQTLTEEVRNLKIINENS 710

Query: 288 EQKTILS 294
           E + + S
Sbjct: 711 ESEALRS 717



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 76/207 (36%), Gaps = 10/207 (4%)

Query: 93  TDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS---- 147
             L +  + S+      + +T +     L  K D   +  E R+E +    G +      
Sbjct: 716 RSLQESMRASMAAAETKLLETTRDLNHVLELKSDENRRLGEERDELVEKLEGAHKEKADL 775

Query: 148 -TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-- 204
            T        I +V    +     +      + +L+ +   +   +   ++ L  +K   
Sbjct: 776 ETEGTSLRAKIETVRGEKRDLEKTLEREIREKTELKAQVENILQEIGRLEEQLKDIKEAH 835

Query: 205 --LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             L E+    +  + + +R   ++ ++L ++   +       +E   +      + L E 
Sbjct: 836 SKLQEEKQTLEEKIERLQREHCEARVKLEKDTVGKLAAKVKDHETKLQQVECENSQLAEK 895

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQ 289
           +  LE++ R  A+E+ +LT   +  EQ
Sbjct: 896 NCLLEESSRRTAEELKRLTAALRAAEQ 922



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 67/197 (34%), Gaps = 7/197 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +L  L +   + L    D  +  ++ L  +   L +     E++L  +  +     ++  
Sbjct: 1003 ELKALLESDKRRLMDQNDALQRQMEELAKEKQSLGRNATDLEKRLASY--EEVKIENEYL 1060

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN--LFEKNAV 211
            N     +   L+    R+ +       L  K S   ++L    K++T + N  + ++   
Sbjct: 1061 NTFNKQLQGELQEAKGRVAAKETELTTLRTKQSQTESMLEERDKEITKLINEFVAKEKKQ 1120

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
              +   + E +  +   EL       + +    +    +      +    +   LE+ ++
Sbjct: 1121 EADHKQRLEELEQRLRAELDGV---AERVRSECDATLAKEKKTLRDEQTALEGRLEEMRK 1177

Query: 272  TFADEMSKLTILEKTRE 288
                   + T LE   E
Sbjct: 1178 EKQTLREEQTALEGRLE 1194


>gi|163846575|ref|YP_001634619.1| RND family efflux transporter MFP subunit [Chloroflexus aurantiacus
           J-10-fl]
 gi|222524366|ref|YP_002568837.1| RND family efflux transporter MFP subunit [Chloroflexus sp.
           Y-400-fl]
 gi|163667864|gb|ABY34230.1| efflux transporter, RND family, MFP subunit [Chloroflexus
           aurantiacus J-10-fl]
 gi|222448245|gb|ACM52511.1| efflux transporter, RND family, MFP subunit [Chloroflexus sp.
           Y-400-fl]
          Length = 586

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 89/273 (32%), Gaps = 47/273 (17%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +V+++G +          +   G +++  V  G Q+  G PLL  +D +    +   + +
Sbjct: 63  TVNATGSVEPNQTAELSLTL-GGRVQEVLVTVGQQVAAGDPLLRLDDRQLRADVAAAEAA 121

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   +  +   +             E+A   +  +    +    +  ++       +   
Sbjct: 122 VALAQADLQALR-------------ERATPEQRAEAEALVAAAQAGLAQTQTNVTPADIA 168

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           + +  +T  R      L+       +RA  +  Q               +Q +L +Q  +
Sbjct: 169 AAQAAVTEARERLQKLLNGATNEQRVRAEAALVQ---------------AQAELERQRDL 213

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEA-----------------NLEFANYLKEISRD 265
           +  +  E    +  Q N LR+    Y +A                         ++  R 
Sbjct: 214 LSAAKSEALARVEAQANALRNAQSAYSDAYWNWEHVKANGTDPRTGRSLNETEQRDFERA 273

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            E+  RT AD  S L    +   Q  + + ++G
Sbjct: 274 FERAARTLADAESALAQA-QIAYQTAVQNEVSG 305



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/337 (13%), Positives = 99/337 (29%), Gaps = 19/337 (5%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++     L+     E     DL   +       ++ + +AL    + Y      +E  +
Sbjct: 192 QRVRAEAALVQ-AQAELERQRDLLSAAKSEALARVEAQANALRNAQSAYSDAYWNWEHVK 250

Query: 136 EQLLDFL--GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALL 192
               D       + T  + F        R+L    + +    +  +  ++N+ S L A  
Sbjct: 251 ANGTDPRTGRSLNETEQRDFERAFERAARTLADAESALAQAQIAYQTAVQNEVSGLAAAE 310

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +        +  +            + +    ++ L        Q  +     +L     
Sbjct: 311 ARVASAKADLDAILAGPDSDAIAAARAQLARAEAELARLTGAARQNAIAAQQAQLAAAQA 370

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
                     + DL + +   A   ++L       E+ T+ +P AG +      S+    
Sbjct: 371 RLAQLTADPRASDLARAEARLAQAQAQLEAARIRLEEATLRAPFAGVVAAVNV-SAGEAV 429

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P++ I        ++  V    +  V  G    V        +   F+  +  I+P
Sbjct: 430 SGQTPIVLI--DVSRYLVKVTVDEVDVARVAPGQPVEVTVDAL---QGPPFRGEVVNIEP 484

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           + +           Y V +     AF  +   +R G 
Sbjct: 485 LPAGTSAVTA----YRVTV-----AFDPSGQPVRAGM 512


>gi|328873463|gb|EGG21830.1| smooth muscle caldesmon [Dictyostelium fasciculatum]
          Length = 1256

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 78/208 (37%), Gaps = 9/208 (4%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
             + +       K+   +  R   + E++   FL    D      E+ E+ +  F  +  
Sbjct: 429 LREKQARREAQEKEKKEREQRARAEKEETEKQFLLGGRDRKSTLQET-EDAITQFKQQLE 487

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           +    +      +  + ++  +T  R +   R++ E K   LR      ++     +   
Sbjct: 488 TQAKSLIEERSQADEKDIQQTMTLQREMEA-RVEAERKERDLREEKELKERQRVEKEAEQ 546

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           +K A       +Q+R+  +   + + +  E+K  L  + +  D+   +     +   ++ 
Sbjct: 547 KKRA-------EQDRVECERLEKEKRDQTEEKERLERVQKQKDKEEKDKKEREERAEQER 599

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILS 294
               +  ADE SK   L   +E++ +L+
Sbjct: 600 RDAAKKAADEKSKQESLASAKEKERLLA 627



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 69/196 (35%), Gaps = 1/196 (0%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            + +++++V  + L       +  ++    + + +EK  + R E+    + +      + 
Sbjct: 293 AERLEMERVEKERLENERLENERQIEKERVEKERVEKLEKERLEKERLEMERVEKERVEK 352

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                    R  K++  R+  + + R + +      +      +K+    +   E+    
Sbjct: 353 LERDRLEKERLEKLEKERLEKLEIERREAKENLEREKRERVEREKEERDKREQQEQEERE 412

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q +  QQE++     L LRE    ++   +   E    A  E     K+        + T
Sbjct: 413 QWEKEQQEKMEEMERL-LREKQARREAQEKEKKEREQRARAEKEETEKQFLLGGRDRKST 471

Query: 273 FADEMSKLTILEKTRE 288
             +    +T  ++  E
Sbjct: 472 LQETEDAITQFKQQLE 487


>gi|261393081|emb|CAX50678.1| putative membrane fusion protein [Neisseria meningitidis 8013]
 gi|325207591|gb|ADZ03043.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           NZ-05/33]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 79/262 (30%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        N    E      +       ++ + +         +
Sbjct: 112 LVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELKALIRQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 172 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 230

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 231 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 287

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      +++ +L  G   +
Sbjct: 288 SFVP-----NSDGKLATGMTTQ 304


>gi|237736605|ref|ZP_04567086.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
 gi|229420467|gb|EEO35514.1| predicted protein [Fusobacterium mortiferum ATCC 9817]
          Length = 371

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 77/214 (35%), Gaps = 20/214 (9%)

Query: 210 AVSQNDLN----QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            + +  L     + ER   +  LE  +    +     ++ +   +     AN +KE+  +
Sbjct: 85  FIEKGQLLMTFDETERNNIERNLEREKLALSKLKRDYNVEKELYKIGGSSANSVKELEEE 144

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           + + +    +    L    +      ILSP++GTI    +   +       PLM+I   S
Sbjct: 145 IRKVEINIEEYEEDLAKTAEK-----ILSPVSGTITSLTA-QENYLVDTDSPLMEIADLS 198

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
            +  +  +V    +++V  G    ++   +   ++K F   + KI  I   + +   ++ 
Sbjct: 199 DIKIV-LEVPEYDVKNVYIGQKILLKPEAFE--KKKSFPGKVTKISKIS--EVSETTSEN 253

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             E  +K  ++        +  GF          
Sbjct: 254 ILETEVKPDEVIPY-----IVPGFKVTATIYLDE 282



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 96/252 (38%), Gaps = 22/252 (8%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKSALD---FL 120
           + +  V+ G  I +G  L+TF++ E       ++ +K+++  L+   + EK         
Sbjct: 75  VDEVFVQEGDFIEKGQLLMTFDETERNNIERNLEREKLALSKLKRDYNVEKELYKIGGSS 134

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
            N    LE+     E  + ++      T  K+ +  +S    SL  +   +       ++
Sbjct: 135 ANSVKELEEEIRKVEINIEEYEEDLAKTAEKILSP-VSGTITSLTAQENYLVDTDSPLME 193

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHEQKN 239
           + +  S ++ +L   + D+  +        + Q  L + E    K +   +   I +   
Sbjct: 194 IAD-LSDIKIVLEVPEYDVKNV-------YIGQKILLKPEAFEKKKSFPGKVTKISKISE 245

Query: 240 MLRHINELYDEANLEFANYL------KEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +    +E   E  ++    +       +++  +  +++     + K ++LE  ++   ++
Sbjct: 246 VSETTSENILETEVKPDEVIPYIVPGFKVTATIYLDEQESEIIVPKTSVLESDKKYFVVV 305

Query: 294 SPIAGTIVYNQS 305
           +   G +   + 
Sbjct: 306 ANSDGIVKRQEV 317


>gi|226329396|ref|ZP_03804914.1| hypothetical protein PROPEN_03301 [Proteus penneri ATCC 35198]
 gi|225202582|gb|EEG84936.1| hypothetical protein PROPEN_03301 [Proteus penneri ATCC 35198]
          Length = 541

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 66/187 (35%), Gaps = 5/187 (2%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS-SVYR 162
              +  ++ E+  L+    +   LE+   ++E +      +     +++          R
Sbjct: 49  AACQAQLEAEQERLEAQRQEAARLEQERLAQEAEAQRLAQEEAQRQAELKAEQERLEAQR 108

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           + + +L +         +   + + L+A     +++    + L ++   ++     QE  
Sbjct: 109 AEQERLAQEAEAQRLAQEEAQRQAELKAEQERLEQERAEQERLAQE---AEAQRLAQEEA 165

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
             ++ L+  +   EQ+   +       EA    A   +     + Q +    + + +  +
Sbjct: 166 QRQAELKAEQERLEQERAEQERLAQEAEAQ-RLAQEEENERLAIAQAEAEDIEALREEVL 224

Query: 283 LEKTREQ 289
            +K  EQ
Sbjct: 225 ADKVVEQ 231


>gi|124268905|ref|YP_001022909.1| putative membrane-fusion protein [Methylibium petroleiphilum PM1]
 gi|124261680|gb|ABM96674.1| putative membrane-fusion protein [Methylibium petroleiphilum PM1]
          Length = 569

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 72/189 (38%), Gaps = 22/189 (11%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSIL-----------------LPIEISVSSSG 48
           W+ L   H A    + LL I+G  G   W +                    I+  V+++G
Sbjct: 13  WRRLL-AHRALWAVIALLLIVG-GGYAAWRLFYGQPNLREQYQFATVQRADIQDLVTATG 70

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
            +   D V ++ +  SG +K+  VE GS +  G  L   +    T  +D ++  ++N R 
Sbjct: 71  TVQPRDYV-DVGAQVSGQLKRLHVEVGSIVKAGDLLAEIDPTVLTATVDARRAGLRNQRA 129

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            +   +S       +  +  +    +++       +     +K     I ++  S++   
Sbjct: 130 TLAERESQYAL--AQLLLTRQRNLMKDDATTTESLQQAEATAKAAKAQIDAIKASIEQTE 187

Query: 169 TRMRSIYLN 177
           + +R+   N
Sbjct: 188 STLRADEAN 196



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 76/214 (35%), Gaps = 19/214 (8%)

Query: 211 VSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             +  L  Q   + +   +  L + +  ++  L   +    E+  +     K     ++ 
Sbjct: 119 ARRAGLRNQRATLAERESQYALAQLLLTRQRNLMKDDATTTESLQQAEATAKAAKAQIDA 178

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHS 325
            + +     S L   E       I +P+AGT+V   +         +Q    +++I    
Sbjct: 179 IKASIEQTESTLRADEANLNYAKIYAPLAGTVVSVTAR-QGQTLNANQSAPTILRIA-DL 236

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               ++ +V+   +  ++     TV F      + +++   + K++P  +  +N +    
Sbjct: 237 STMTVQTQVSEADVSKLR--QDMTVYFTTLG-SQGRRWYGTLRKVEPTPTVTNNVVLYNA 293

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            ++V          +NN  L     A+V F A  
Sbjct: 294 LFDV---------PNNNQALMTNMTAQVFFIAAE 318


>gi|330808982|ref|YP_004353444.1| hypothetical protein PSEBR_a2168 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377090|gb|AEA68440.1| Conserved hypothetical protein; putative membrane protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 288

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/229 (10%), Positives = 72/229 (31%), Gaps = 22/229 (9%)

Query: 204 NLFEKNAVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            + +   V + D+       +    +  +  ++     ++              ++    
Sbjct: 62  PIVDNQYVHRGDILYVIDPLRYRLALAAAEADVEAKRQDRLVRQAAARRRGQLRDIVSQE 121

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            +++          T+   ++ L + +    + TI SP+ G +   +     +YA     
Sbjct: 122 DVQQTGGAAAVAGATYQAALAALDLAKLNLARSTIRSPVDGYVTNLRLR-PGDYATAGSA 180

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID------ 371
            + ++  +   ++       +I+ +  G  A +    +        ++I   I+      
Sbjct: 181 TVAVL-DAASFWVTGYFEETKIRQIHVGKPARIMLMGFDQPVSGHVESIGRGIENSNDSP 239

Query: 372 -----PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                P ++     ++  +   V + I  +      +EL  G  A V  
Sbjct: 240 GHLGLPNVAATFTWVRLAQRIPVRIHIDRV---PAGVELAAGMTASVEI 285



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 36/112 (32%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV+I    SG +    + +   + +G  L   + +     +   +  ++  R    
Sbjct: 43  VSADVVQIAPEVSGTVSAVPIVDNQYVHRGDILYVIDPLRYRLALAAAEADVEAKRQDRL 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             ++A        D++ +    +        G  +       +    ++ RS
Sbjct: 103 VRQAAARRRGQLRDIVSQEDVQQTGGAAAVAGATYQAALAALDLAKLNLARS 154


>gi|254882109|ref|ZP_05254819.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294776575|ref|ZP_06742045.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
           PC510]
 gi|319640881|ref|ZP_07995592.1| hypothetical protein HMPREF9011_01189 [Bacteroides sp. 3_1_40A]
 gi|254834902|gb|EET15211.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294449563|gb|EFG18093.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
           PC510]
 gi|317387518|gb|EFV68386.1| hypothetical protein HMPREF9011_01189 [Bacteroides sp. 3_1_40A]
          Length = 416

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 107/314 (34%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTCSK 151
           TD I + +V       ++D E      L  K +  E     R   +  + + +  +    
Sbjct: 45  TDNIQIAEVKNDKFMEYVDVEGLVQPILTIKVNTREAGSVDRIVGEEGNMMKQGDTLLIL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                I S+         +  +     +++E KS  L+      Q ++  ++        
Sbjct: 105 TNPDLIRSIEDQRDEWEKQRITYKEKEIEMEQKSLTLKQQTLQAQYEMERLR-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        +    + E +   +  N      +L+  + +  I ++L +N  
Sbjct: 157 -KSFGLDKEEFKMGIKSKAELQVSEDEYKYKLKNTALQMESLKHDSSVTLIRKELLKN-- 213

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  KL   E+  E   I +PI G + + +  +        + + +I        I 
Sbjct: 214 DLERESKKLKRAEERLEDLIIKAPIGGQLSFVKV-TPGQQVASGESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPI-ISQQDNNLQTQE 385
             ++   I  +  G  ATV +    Y     K    + ++   +D +   +   N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATVNYQGKRYPLRITKVVPEVKDRMFDVDLVFTGEMPENVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEQA 345


>gi|254804432|ref|YP_003082653.1| probable periplasmic protein [Neisseria meningitidis alpha14]
 gi|304388224|ref|ZP_07370344.1| macrolide-specific efflux protein MacA [Neisseria meningitidis ATCC
           13091]
 gi|254667974|emb|CBA04259.1| probable periplasmic protein [Neisseria meningitidis alpha14]
 gi|304337751|gb|EFM03900.1| macrolide-specific efflux protein MacA [Neisseria meningitidis ATCC
           13091]
 gi|325206600|gb|ADZ02053.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           M04-240196]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDAFAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 78/262 (29%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        +    E      +       ++ + +         +
Sbjct: 112 LVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDAFAAAKANVAELKALIRQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 172 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 230

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 231 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 287

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 288 SFVP-----NPDGKLATGMTTQ 304


>gi|238776848|ref|NP_001154918.1| myosin, heavy polypeptide 1.2, skeletal muscle [Danio rerio]
          Length = 1935

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L ++  KY    +++   G  
Sbjct: 1414 LEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQKYEEGQAEL--EGAQ 1471

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   L+    + Q++++ +     +   S ++L +
Sbjct: 1472 KEARSLSTELFKMKNSYEETLD---QLETLKRENKNLQQEISDLTEQIGETGKSIHELEK 1528

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      EI R L +          
Sbjct: 1529 SKKAVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEIEQIKR 1588

Query: 278  --SKLTILEKTREQKTILS 294
               ++T   ++     + S
Sbjct: 1589 NSQRITDSMQSTLDSEVRS 1607



 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/227 (11%), Positives = 72/227 (31%), Gaps = 11/227 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1208 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKN 1265

Query: 146  HSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                 ++   +   + +         ++         L          +   ++ +    
Sbjct: 1266 DENLRQLNDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEA 1325

Query: 204  NLFEKNAVSQND-----LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
                 +AV         L +Q     ++  EL+  + +  + +      Y+   ++    
Sbjct: 1326 KNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEE 1385

Query: 259  LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1386 LEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLMI 1430



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 74/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + +  K      L   I+ E+S    L  K   L+   
Sbjct: 1058 EGDLKLAQESIMDLENDKQQSEEKLKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1117

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1118 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1171

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1172 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1226

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +       + +   +LE+  RT  D++S++        ++
Sbjct: 1227 KMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKNDENLRQ 1271



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 71/202 (35%), Gaps = 17/202 (8%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV---FNYGISSV 160
            K         +  L+    +++    A   ++   +  LG+      +V        S  
Sbjct: 1167 KKREAEFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1226

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ----KDLTMMKNLFEKNAVSQND- 215
               +    + M ++   + +LE     L   LS  +    ++L  + +L  + A  Q + 
Sbjct: 1227 KMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKNDENLRQLNDLSAQRARLQTEN 1286

Query: 216  ------LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
                  L ++E +V + T   +    + + + R I E   EA    A+ ++    D +  
Sbjct: 1287 GEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEE---EAKNALAHAVQSARHDCDLL 1343

Query: 270  QRTFADEMSKLTILEKTREQKT 291
            +  F +E      L++   +  
Sbjct: 1344 REQFEEEQEAKAELQRGMSKAN 1365


>gi|167628560|ref|YP_001679059.1| efflux transporter, rnd family, mfp subunit [Heliobacterium
           modesticaldum Ice1]
 gi|167591300|gb|ABZ83048.1| efflux transporter, rnd family, mfp subunit [Heliobacterium
           modesticaldum Ice1]
          Length = 313

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 43/128 (33%), Gaps = 14/128 (10%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +PIAG ++  +  +  ++     PL + V       I+A V    +  +         
Sbjct: 102 LTTPIAGQLMEKKVAT-GSWVPPGTPLAE-VADPTDLVIQAMVDETDVLKLAPDQAVRWT 159

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              Y     + F   +  +  +IS+     +    + V+L       +   + L  G  A
Sbjct: 160 LAGYP---GQVFSGKVLTVSRVISRDHEGNKG---FRVLLS------APPGLTLYAGMTA 207

Query: 412 EVLFTAKN 419
           E     + 
Sbjct: 208 EGRVILEE 215


>gi|52840675|ref|YP_094474.1| multidrug resistance efflux pump PmrA [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|52627786|gb|AAU26527.1| multidrug resistance efflux pump PmrA [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
          Length = 350

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 77/205 (37%), Gaps = 6/205 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              +  TL ++I  IG +T +I+      +  +      +NV  + +  SG I +  V+N
Sbjct: 24  KPKRWFTLTNVIIFIGFLT-AIIYVFSYLIPFTDNAFVVNNVRPVAALTSGYITELYVKN 82

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKA 130
           G  + +G  L T         ++     +   +  +   K+     L    N+  + +K 
Sbjct: 83  GDAVRKGQKLFTVFKKPYEYTVEQLSADLAGAQAKLAVLKATYERDLKLSGNEQKIYKKL 142

Query: 131 FESREEQLLDFLGKYHSTCS-KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            +  ++ L  +  K  S  + +       +     +  L ++          EN+   ++
Sbjct: 143 AQDDQKYLKGYAIKSVSLITLQNSQQETKAAKDKWQASLKQLEIDQHQITVQENEIKSIQ 202

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQN 214
           A L + + +L +     + N V QN
Sbjct: 203 ARLKNAKVNLDLTDVYAQGNGVIQN 227



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 59/180 (32%), Gaps = 10/180 (5%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +  +  +    + K ++L+A      K     + +++K A       +   I   S + L
Sbjct: 104 VEQLSADLAGAQAKLAVLKATYERDLKLSGNEQKIYKKLAQDDQKYLKGYAIKSVSLITL 163

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           + +  E K           +  ++           +   +       ++L   +   +  
Sbjct: 164 QNSQQETKAAKDKWQASLKQLEID--------QHQITVQENEIKSIQARLKNAKVNLDLT 215

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +   G I     F+       +QPL  +V      YI+A      ++ V+KG    +
Sbjct: 216 DVYAQGNGVIQNL-FFTIGTPVNINQPLFSLV-DQDNIYIQANFNETDLRDVRKGSKVLI 273


>gi|24375502|ref|NP_719545.1| hypothetical protein SO_4015 [Shewanella oneidensis MR-1]
 gi|24350365|gb|AAN56989.1|AE015832_5 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 435

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 65/204 (31%), Gaps = 30/204 (14%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++  +   E+   K+  +L +           +  + D    E     K+   +L +N 
Sbjct: 107 VTKGQVIA-EQDNTKAKADLDKAKSTLALAKTKLERIEDLLIKEPFALAKQDVDELRENV 165

Query: 271 RTF-ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS--SSNYAQQSQPLMKIVPHSKL 327
               AD   K   +        I +P  G      SFS    +       L+ +   +  
Sbjct: 166 NLADADFRQKQATMNDYL----IKAPFDG---QLTSFSQSIGSQIAAGTALVTLYSLNP- 217

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
             +  +  ++       +KG    V    YA+   K FK  +  + P + +         
Sbjct: 218 --VEVRYAISQHDFGKAQKGQGVNVTVEAYAN---KVFKGTVNYVAPAVDESSG------ 266

Query: 386 YYEVILKITDLAFSDNNIELRNGF 409
                +++   A  ++  +L  G 
Sbjct: 267 ----RVEV-HAALDNSEFKLAPGM 285



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 44/116 (37%), Gaps = 18/116 (15%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--------- 117
           I      NG ++ +G  +   ++ +    +D  K ++   +  ++  +  L         
Sbjct: 96  ISAIHFSNGDKVTKGQVIAEQDNTKAKADLDKAKSTLALAKTKLERIEDLLIKEPFALAK 155

Query: 118 ---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              D L    ++ +  F  ++  + D+L K        F+  ++S  +S+  ++  
Sbjct: 156 QDVDELRENVNLADADFRQKQATMNDYLIKAP------FDGQLTSFSQSIGSQIAA 205


>gi|332995617|gb|AEF05672.1| RND family efflux transporter MFP subunit [Alteromonas sp. SN2]
          Length = 372

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 92/271 (33%), Gaps = 31/271 (11%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
              R +       +      R        D++  + + +   ++  +  + E  V  +  
Sbjct: 42  ANSRQLAGTVESTDESELSFRVGGRVASVDVSSGEKIIKGQLLATLEKKEYELAVQSAKA 101

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD-----EMSKLTIL 283
           +L     E K      + L  + NL    ++ + S D  Q   T A+      ++ L   
Sbjct: 102 KLASARAEFKE---KSDALKRQQNLRAKEFVAQASVDQAQAAFTAANSNVDVAVTDLENA 158

Query: 284 EKTREQKTILSPIAGTIVYNQS--FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           ++  E   +L+P  G+IV      F+          + ++        +   +    I+ 
Sbjct: 159 QQDLENTELLAPFDGSIVTRSIEPFTE---VAAGSTVFELQ-SQGAMKVEVLMPETLIRE 214

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           +  G + +V+F           K +   +   +S+  +  Q    + V ++      +  
Sbjct: 215 ISYGDSTSVQF--------PTLKGV--TVYGAVSKIGSKAQKGNAFPVSVE-----LAQT 259

Query: 402 NIELRNGFPAEVLFTAKNTTLAQ-EIIHPIT 431
             ++R G  A+V F       A   +I PIT
Sbjct: 260 TEDIRPGMTAQVTFNYGEAADASVYLI-PIT 289



 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 33/106 (31%), Gaps = 3/106 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---L 120
            G +    V +G +I++G  L T E  E    +   K  + + R     +  AL     L
Sbjct: 64  GGRVASVDVSSGEKIIKGQLLATLEKKEYELAVQSAKAKLASARAEFKEKSDALKRQQNL 123

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             K  V + + +  +              + + N         L  
Sbjct: 124 RAKEFVAQASVDQAQAAFTAANSNVDVAVTDLENAQQDLENTELLA 169


>gi|330820536|ref|YP_004349398.1| Multidrug resistance efflux pump protein [Burkholderia gladioli
           BSR3]
 gi|327372531|gb|AEA63886.1| Multidrug resistance efflux pump protein [Burkholderia gladioli
           BSR3]
          Length = 346

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 71/235 (30%), Gaps = 30/235 (12%)

Query: 204 NLFEKNAVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            + +  AVSQ  +       +    +  +   L +         R         NL  + 
Sbjct: 64  RVVDNQAVSQGQVLFVIDRARYTLALRLAQATLEQRAATLAQARREYARNLKLGNLVASE 123

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L+E    ++Q     AD    +       ++ TI+SP+ G  + +++     Y    + 
Sbjct: 124 QLEESRTRVDQGAAALADAQVNVDTARLNLQRTTIVSPVDGY-LNDRAPRVGEYVPAGRA 182

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++ +V       +       ++  +  G    +          +  +  ++ I   I  +
Sbjct: 183 VLSVV-DQHSFRVDGYFEETKLHGIHIGQPVDISV----MGEPRPLRGHVQSIVAAIEDR 237

Query: 378 DNNLQTQ---------------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           D                     +   V + + ++    ++  +  G  A V   A
Sbjct: 238 DRTQSANLLPNVNPAFSWVRLAQRIPVRVALDEV---PDDFRMIAGRTATVAIRA 289



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 62/170 (36%), Gaps = 23/170 (13%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITW--------SILLPIEISVSSSGEILNEDNVVEI 59
           N KR   ++ + +  L ++ + GL+ W        S     +  V +        +V+++
Sbjct: 2   NAKRTWFSAGQILLTLIVVVVAGLVLWRIINYYMFSPWTR-DGHVRA--------DVIQV 52

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
               SG+I + +V +   + QG  L   +    T  + L + +++     +   +     
Sbjct: 53  APDVSGLITEVRVVDNQAVSQGQVLFVIDRARYTLALRLAQATLEQRAATLAQARREYAR 112

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                  L+       EQL +   +     + + +  ++     L ++ T
Sbjct: 113 ------NLKLGNLVASEQLEESRTRVDQGAAALADAQVNVDTARLNLQRT 156


>gi|299768875|ref|YP_003730901.1| membrane-fusion protein [Acinetobacter sp. DR1]
 gi|298698963|gb|ADI89528.1| membrane-fusion protein [Acinetobacter sp. DR1]
          Length = 372

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 13/213 (6%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           R       +  +   ++ +   +    +   ++  L  ++ V++    +      +S  E
Sbjct: 68  RAVQQSSIQAQVSATATTVTTNVGQQVQKGQVLVRLNNQDNVARLAQARANLASAQSQAE 127

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L  N+  +K  L +   +   A +EF     +    LE  +   A+    + I  K  + 
Sbjct: 128 LARNLMNRKQRLFNQGFI---ARVEFEQSQVDYKGQLESVKAQQAN----VDIARKADQD 180

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I SPI+G I   Q           Q L +IV +     I+AK+  +Q   +K G +  
Sbjct: 181 GIITSPISGVITKRQV-EPGQTVSVGQTLFEIV-NPDQLEIQAKLPIEQQSALKVGSSIQ 238

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
            +         K+  A + +I P+  Q    ++
Sbjct: 239 YQI----QGNSKQLNATLTRISPVADQDSRQIE 267



 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 23/221 (10%), Positives = 80/221 (36%), Gaps = 14/221 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++   + +G I        I++  S          G Q+ +G  L+   + +    +   
Sbjct: 57  LDSQTAFTGTIRAVQQS-SIQAQVSATATTVTTNVGQQVQKGQVLVRLNNQDNVARLAQA 115

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++ + +   +  ++ ++     ++    A    E+  +D+ G+  S  ++  N  I+ 
Sbjct: 116 RANLASAQSQAELARNLMNRKQRLFNQGFIARVEFEQSQVDYKGQLESVKAQQANVDIAR 175

Query: 160 VYRSLKMKLTRMRSIYLNRL----DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                 +  + +  +   R        +    L  +++  Q ++     + +++A+    
Sbjct: 176 KADQDGIITSPISGVITKRQVEPGQTVSVGQTLFEIVNPDQLEIQAKLPIEQQSAL---- 231

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                ++      +++ N  +    L  I+ + D+ + +  
Sbjct: 232 -----KVGSSIQYQIQGNSKQLNATLTRISPVADQDSRQIE 267


>gi|290511840|ref|ZP_06551208.1| inner membrane protein yibH [Klebsiella sp. 1_1_55]
 gi|289775630|gb|EFD83630.1| inner membrane protein yibH [Klebsiella sp. 1_1_55]
          Length = 378

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 69/224 (30%), Gaps = 23/224 (10%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   +  +   L   L  + ++     + +  ++ + A      KD              
Sbjct: 99  YQARVDRLQADLVTALHSINTLKAQLSEAQANTTRVSAERDRLYKDYQRY---------- 148

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
                  +    +       +I   +      + L   +  E A    ++   +   Q  
Sbjct: 149 ------LKGSQARVNPFSESDIDNARQNYLAQDALVKASVAEQAQIQSQLDSMINGEQSQ 202

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYI 330
            A   ++L   +   +Q T+ +P  G I          YA     +P+M  +P  K   +
Sbjct: 203 VASLRAQLAEAKYNLDQTTVRAPSDGYITQVLIR-PGTYAASLPLRPVMVFIPEQKRLIV 261

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            A+     +  ++KG  A   F        + F   +  I P++
Sbjct: 262 -AQFRQNSLLRLEKGDDAEAVFNALP---GQVFHGKLVSILPVV 301



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 55/155 (35%), Gaps = 11/155 (7%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-------SIKNLRCHID 111
           I    +G++     +   ++ +G  L T +       +D  +        SI  L+  + 
Sbjct: 66  ITPQVTGVVNSVTDKANQRVKKGEVLFTIDPARYQARVDRLQADLVTALHSINTLKAQLS 125

Query: 112 TEKSALDFLNNKYDVL----EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++    ++ + D L    ++  +  + ++  F         + +    + V  S+  +
Sbjct: 126 EAQANTTRVSAERDRLYKDYQRYLKGSQARVNPFSESDIDNARQNYLAQDALVKASVAEQ 185

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                 +       +++ + LRA L+  + +L   
Sbjct: 186 AQIQSQLDSMINGEQSQVASLRAQLAEAKYNLDQT 220


>gi|170766962|ref|ZP_02901415.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia albertii TW07627]
 gi|170124400|gb|EDS93331.1| auxiliary transport protein, membrane fusion protein family
           [Escherichia albertii TW07627]
          Length = 355

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 73/199 (36%), Gaps = 7/199 (3%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            ++ ++ +  ++ W +L P    E    S+G I   +  V+I S  +G I    V+ G  
Sbjct: 11  WVVGLLAVAAVVAWWLLRPAGVPEGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQF 68

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L   +     +        IK  +  +   ++ L+   ++    +     R+ +
Sbjct: 69  VREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAE 128

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     ++  + S      IS+  + L        S        + + S  +A + + + 
Sbjct: 129 LDSVAKRHTRSRSLAQRGAISA--QQLDDDRAAAESARAALESAKAQVSASKAAIEAART 186

Query: 198 DLTMMKNLFEKNAVSQNDL 216
           ++   +   E    ++  +
Sbjct: 187 NIIQAQTRVEAAQATERRI 205


>gi|161522716|ref|YP_001585645.1| RND family efflux transporter MFP subunit [Burkholderia multivorans
           ATCC 17616]
 gi|189348427|ref|YP_001941623.1| copper efflux system membrane protein [Burkholderia multivorans
           ATCC 17616]
 gi|160346269|gb|ABX19353.1| efflux transporter, RND family, MFP subunit [Burkholderia
           multivorans ATCC 17616]
 gi|189338565|dbj|BAG47633.1| copper efflux system membrane protein [Burkholderia multivorans
           ATCC 17616]
          Length = 509

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 58/182 (31%), Gaps = 35/182 (19%)

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L E SR   +        ++ L    K +    + SP AG +               Q L
Sbjct: 192 LLEASRARMRAMSIPDGIIASLDRTGKAQTHVVLTSPEAGVVSELNVR-DGAMVAPGQTL 250

Query: 319 MKIVPHSKL-TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            KI   SKL   +   +      +V+ G T       +A    + F   I +I P IS  
Sbjct: 251 AKIAGLSKLWLIVE--IPEALALNVQPGMTVD---ATFAGDPSQHFAGHIREILPGISTT 305

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGF-----------------PAEVLFTAKNT 420
              LQ        L+I + A     ++L  G                  P+E + T    
Sbjct: 306 SRTLQ------ARLEIDNAA-----LKLTPGMLMRVRVAGQKAVSRLLVPSEAVITTGKR 354

Query: 421 TL 422
           ++
Sbjct: 355 SV 356



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 7/52 (13%), Positives = 21/52 (40%), Gaps = 7/52 (13%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           I+  ++ +  +   ++          P +G++ +  V +G+ +  G  L   
Sbjct: 209 IIASLDRTGKAQTHVVLTS-------PEAGVVSELNVRDGAMVAPGQTLAKI 253


>gi|117923733|ref|YP_864350.1| membrane-fusion protein [Magnetococcus sp. MC-1]
 gi|117607489|gb|ABK42944.1| membrane-fusion protein [Magnetococcus sp. MC-1]
          Length = 436

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 53/141 (37%), Gaps = 9/141 (6%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGT 82
           L+++ ++ L       P+ +SV +  E++   N   I+SP  G+I++  V     + +G 
Sbjct: 175 LAVVMVVALCI-----PVRLSVLAPAEVVPH-NPAVIRSPMDGVIQRVHVRPNQSVAEGD 228

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLL 139
            L   E       +++ K ++   R  +D       F         V+    E R  ++ 
Sbjct: 229 LLFELERTMLASKLEVAKKALDTARAELDQASQQAIFDPKAKGTLAVIRARVEERSAEVA 288

Query: 140 DFLGKYHSTCSKVFNYGISSV 160
                      +    G++ +
Sbjct: 289 QLEELLARAQVQAPRGGVAVL 309



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 62/193 (32%), Gaps = 16/193 (8%)

Query: 211 VSQNDLN-QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           V++ DL  + ER +  S LE+ +   +       +++   +A      +  +    L   
Sbjct: 224 VAEGDLLFELERTMLASKLEVAKKALDTAR--AELDQASQQAI-----FDPKAKGTLAVI 276

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
           +    +  +++  LE+   +  + +P  G  ++ + +          + ++  V      
Sbjct: 277 RARVEERSAEVAQLEELLARAQVQAPRGGVAVLDDPTEWQGRPVVVGEKVLA-VASPHDV 335

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            + A + P  +  +++G   ++                +  I      Q +         
Sbjct: 336 EVEAWLAPADVIQLEEGGPVSLFLNADPLS---PVSGKLRYITYEAIPQADGTLGH---R 389

Query: 389 VILKITDLAFSDN 401
           V  ++        
Sbjct: 390 VRAELNKGEAGPR 402


>gi|299141228|ref|ZP_07034365.1| multidrug resistance protein, AcrA/AcrE family [Prevotella oris
           C735]
 gi|298577188|gb|EFI49057.1| multidrug resistance protein, AcrA/AcrE family [Prevotella oris
           C735]
          Length = 399

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 5/64 (7%)

Query: 56  VVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +  I+        SG I +  V  G  +  G PL + +       +   + S+   R  +
Sbjct: 53  IKGIQDVEVRPKVSGFITRVYVHEGQVVKAGQPLFSIDSETYQAAVRQAQASVNTARAQL 112

Query: 111 DTEK 114
           +T +
Sbjct: 113 NTAR 116


>gi|240116222|ref|ZP_04730284.1| MacA [Neisseria gonorrhoeae PID18]
 gi|268601884|ref|ZP_06136051.1| periplasmic protein [Neisseria gonorrhoeae PID18]
 gi|268586015|gb|EEZ50691.1| periplasmic protein [Neisseria gonorrhoeae PID18]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++++
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLNME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQTALWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 63/212 (29%), Gaps = 21/212 (9%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQ 270
           ++ L   +  +  + + L     + K        +    E      + L     ++ + +
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQTALWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLT 328
                    +   E       I + + GT+V             +Q    IV  +   + 
Sbjct: 162 ALIRQSKISINTAESDLGYTRITATMDGTVVAIPV-EEGQTVNAAQSTPTIVQLANLDMM 220

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNN 380
             + ++    I  VK G    + F   ++      KA ++ +DP ++           + 
Sbjct: 221 LNKMQIAEGDITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDT 277

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                YY     +      + + +L  G   +
Sbjct: 278 ASNAVYYYARSFVP-----NPDGKLATGMTTQ 304


>gi|213053360|ref|ZP_03346238.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213649855|ref|ZP_03379908.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
          Length = 344

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  L      +          
Sbjct: 84  LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATELAVKQARIGTIDAQIKRN 143

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 144 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 202

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 203 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKINDAIFYYARFEVP 255

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 256 NPKRI-----LRLDMTAQVYIQ 272



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E SV ++G++     V ++ +  SG +K   V  G  + +   L   +  +  + I   
Sbjct: 19  LEQSVLATGKLDALRKV-DVGAQVSGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEV 77

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  L    + +++A +    +  +  +   ++ + +        +T   V    I +
Sbjct: 78  EATLMELNA--ERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATELAVKQARIGT 135

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 136 IDAQIKRNRASLDTAKTN 153


>gi|197337126|ref|YP_002158759.1| multidrug resistance protein A [Vibrio fischeri MJ11]
 gi|197314378|gb|ACH63827.1| multidrug resistance protein A [Vibrio fischeri MJ11]
          Length = 275

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 90/273 (32%), Gaps = 30/273 (10%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + +   +     + ++ + + +             + + + L   Q +    + L  + 
Sbjct: 18  PQPYLLAVKRAESAYQLAVQQHQVADSKVTQAIANLNGVTSNLKETQIEFKRTQALVSRK 77

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             SQ +L+  +  +  +  +L E     +  +              AN   +   D    
Sbjct: 78  LSSQQELDIIKNKLAIAQAKLEEARANVEAAI--------------ANRGNDNGVDAAIV 123

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q+  A+    L   E       I +P  G +     F   +  + SQ L  +V      +
Sbjct: 124 QQASAE----LAQAELDLSYTDITAPTDGLLGEINVF-VGSVVKNSQMLFPLV-VKNTYW 177

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREK-------KFKAIIEKIDPIISQQDNNLQ 382
           +RA      + +++ G TA V    Y DI  +               + P  +   N ++
Sbjct: 178 VRANFKETSLTNIRMGQTAEVVIDMYPDITWQAKVSELSPASGTSFSLMPPENATGNWVK 237

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            ++ Y V L +       +  +LR G  AEV  
Sbjct: 238 IKQRYPVKLILD---IPKDAPQLRIGASAEVTI 267


>gi|195121678|ref|XP_002005347.1| GI19126 [Drosophila mojavensis]
 gi|193910415|gb|EDW09282.1| GI19126 [Drosophila mojavensis]
          Length = 2047

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 74/235 (31%), Gaps = 25/235 (10%)

Query: 82   TPLLTFED-----IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
              L+  ++               +  +  ++  ++ EKSA          L +  E+ + 
Sbjct: 1165 QTLMRIDEESASKAAAQKAQRELESQLAEIQEDLEAEKSARSKAEKLRRDLSEELEALKN 1224

Query: 137  QLLD------FLGKYHSTCSKVFNYGISSVYRS-----------LKMKLTRMRSIYLNRL 179
            +LLD         +  S   +       S+                     + SI     
Sbjct: 1225 ELLDSLDTTAAQQELRSKREQELAMLKKSLEEEGVNHESVLAEMRHKHAQELNSINDQLE 1284

Query: 180  DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +L    + L     + + +   +         S+ + +++ +       EL+  + E + 
Sbjct: 1285 NLRKAKAGLEKAKGTLEAENADLATELRSVNSSRQENDRRRKQAESQIAELQVKLAEIER 1344

Query: 240  MLRHINELYDEANLE---FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                + E   +   E     N L+E         ++ ++  S+LT  ++  E++T
Sbjct: 1345 ARSELQEKCTKLQQEAENITNQLEEAELKASAAVKSASNMESQLTEAQQLLEEET 1399



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 75/209 (35%), Gaps = 13/209 (6%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             + ++ +++ ++ ++  +   +  L     + D    +  + ++   +   +       +
Sbjct: 1139 KEQLNERRIQVEEMQAQLAKREEELTQTLMRIDEESASKAAAQKAQRELESQLAEIQEDL 1198

Query: 153  FNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKN 209
                   S   +  +     + ++    LD  + ++  + L S  +++L M+K +L E+ 
Sbjct: 1199 EAEKSARSKAEKLRRDLSEELEALKNELLDSLDTTAAQQELRSKREQELAMLKKSLEEEG 1258

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS------ 263
               ++ L +      +    + + +   +     + +       E A+   E+       
Sbjct: 1259 VNHESVLAEMRHKHAQELNSINDQLENLRKAKAGLEKAKGTLEAENADLATELRSVNSSR 1318

Query: 264  ----RDLEQNQRTFADEMSKLTILEKTRE 288
                R  +Q +   A+   KL  +E+ R 
Sbjct: 1319 QENDRRRKQAESQIAELQVKLAEIERARS 1347



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 81/220 (36%), Gaps = 12/220 (5%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            L  E ++    I   +  +         +  EK  L+   N         E + + L   
Sbjct: 1040 LQLEKVQLDAKIKKHEEELALTEDQNQKLLKEKKVLEERANDLSQTLAEEEEKAKHLAKL 1099

Query: 142  LGKYHSTCSKVF------NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
              K+ +T +++               R+ +   T +  +     +   +   ++A L+  
Sbjct: 1100 KAKHEATIAELEERMHKDQQQRQESDRTKRKIETEVADLKEQLNERRIQVEEMQAQLAKR 1159

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            +++LT      ++ + S+    + +R +     E++E++  +K+      +L  + + E 
Sbjct: 1160 EEELTQTLMRIDEESASKAAAQKAQRELESQLAEIQEDLEAEKSARSKAEKLRRDLSEEL 1219

Query: 256  ANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTI 292
                 E+   L      Q   +    +L +L+K+ E++ +
Sbjct: 1220 EALKNELLDSLDTTAAQQELRSKREQELAMLKKSLEEEGV 1259



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 69/206 (33%), Gaps = 3/206 (1%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E        +     L+   +   + L+    K     K+  + E QL +          
Sbjct: 1341 EIERARSELQEKCTKLQQEAENITNQLEEAELKASAAVKSASNMESQLTEAQQLLEEETR 1400

Query: 151  K--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +    +  +  +    +    ++      + + E K + + A +   +K      +L ++
Sbjct: 1401 QKLALSSKLRQIESEKEALQEQLEEDEEAKRNFERKLAEVTAQMQEIKKKAEEDADLAKE 1460

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                +  LN+    + +   EL           + I    ++A +E      ++  +LE+
Sbjct: 1461 LEEGKKRLNKDIEALERQVKELLAQNDRLDKSKKKIQSELEDATIELEAQRTKVL-ELEK 1519

Query: 269  NQRTFADEMSKLTILEKTREQKTILS 294
             Q+ F   +++   + +   Q+   +
Sbjct: 1520 KQKNFDKILAEEKAISEQIAQERDTA 1545



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 74/203 (36%), Gaps = 18/203 (8%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +     D  +   +     + +    LD   +K + LE   +  + +L D      +   
Sbjct: 1537 QIAQERDTAEREAREKETKVLSVSRELDEAYDKIEDLETKRKQLQNELDDL-----ANTQ 1591

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
               +  +  + ++ +   +++  +     +LE+   L        + ++  +++ FE++ 
Sbjct: 1592 GTADKNVHELEKAKRALESQLAELKAQNEELEDDLQLTEDAKLRLEVNMQALRSQFERDL 1651

Query: 211  VSQNDLNQQER-----IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +++ +  +++R      +     EL E   ++   +         A  +    LKEI   
Sbjct: 1652 LAKEEGAEEKRRGLVKQLRDLEAELDEERKQRTAAVA--------AKKKLEGDLKEIETT 1703

Query: 266  LEQNQRTFADEMSKLTILEKTRE 288
            +E + +   D +     L+   +
Sbjct: 1704 MEMHNKVKEDALKHAKKLQAQVK 1726


>gi|182412752|ref|YP_001817818.1| RND family efflux transporter MFP subunit [Opitutus terrae PB90-1]
 gi|177839966|gb|ACB74218.1| efflux transporter, RND family, MFP subunit [Opitutus terrae
           PB90-1]
          Length = 366

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 86/264 (32%), Gaps = 29/264 (10%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKST 227
              R  + N +      +  R +    + +  + +  FE   AV+  DL   E      +
Sbjct: 48  EAKRETWPNTVSAVGALASFRGINVKAELEGVVRRIAFESGSAVAAGDLL-VELDTSVES 106

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L     +       + E+      E          DL+  +       S +  L  T 
Sbjct: 107 AQLAGLEAQ-----ARLAEITLTRARELRTNGTNAQADLDTAEAMLVQTRSAVEQLRATI 161

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +K I++P AG  +         +  +   ++++       ++   +  +++  +  G  
Sbjct: 162 AKKRIVAPFAGR-LGIARIYPGQFISKGDAIVQL-ETLDPIHVDFSLPQQELGRISIGQQ 219

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             V       +  +     I  IDP +S+   +        V ++ T   F++    LR 
Sbjct: 220 VNV---STDVLPNQALAGTITAIDPRVSETTRS--------VQVRAT---FANPEERLRP 265

Query: 408 GF--PAEVLFTAKNTTLAQEIIHP 429
           G     EV+  A        I+ P
Sbjct: 266 GMFARVEVVLAASE----NYIVLP 285



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/125 (9%), Positives = 39/125 (31%), Gaps = 4/125 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++++   E+GS +  G  L+  +    +  +   +   +     +   +     L    
Sbjct: 78  GVVRRIAFESGSAVAAGDLLVELDTSVESAQLAGLEAQARLAEITLTRAR----ELRTNG 133

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   ++ E  L+          + +    I + +             ++++ D   +
Sbjct: 134 TNAQADLDTAEAMLVQTRSAVEQLRATIAKKRIVAPFAGRLGIARIYPGQFISKGDAIVQ 193

Query: 185 SSLLR 189
              L 
Sbjct: 194 LETLD 198


>gi|220921848|ref|YP_002497149.1| RND family efflux transporter MFP subunit [Methylobacterium
           nodulans ORS 2060]
 gi|219946454|gb|ACL56846.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           nodulans ORS 2060]
          Length = 316

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 54/169 (31%), Gaps = 12/169 (7%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L Q E +V      L +   +     +  + +  +  LE A    E       +Q     
Sbjct: 87  LRQAEAVVAGRKATLTQAEADLARYQQLSDNVVSQQRLEAA-LATEQGARAAYDQAVADR 145

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
           +++KL        +  + + + G I   +      Y    + +M +V  S   ++     
Sbjct: 146 DLAKLN-----LARSEVRASVNGRISNLELR-PGTYVATGKAVMALV-DSDTLHVEGYFE 198

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
             ++  ++ G   TV            F   +E +   I  ++ +    
Sbjct: 199 ETKLDRIRIGDPVTVHL----MGDSHDFTGRVESVAAGIEDRERSAGAN 243



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 41/127 (32%), Gaps = 6/127 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               VV +    SG+++  +V +  ++ +G  L   +       +   +  +   +  + 
Sbjct: 43  VRAEVVGVAPDVSGLVRAVEVRDNQEVKRGDVLFRIDPERFALALRQAEAVVAGRKATLT 102

Query: 112 TEKSALDFLNNKYD------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
             ++ L       D       LE A  + +     +            N   S V  S+ 
Sbjct: 103 QAEADLARYQQLSDNVVSQQRLEAALATEQGARAAYDQAVADRDLAKLNLARSEVRASVN 162

Query: 166 MKLTRMR 172
            +++ + 
Sbjct: 163 GRISNLE 169


>gi|220941697|emb|CAX15438.1| novel myosin family protein [Danio rerio]
          Length = 1937

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 78/199 (39%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L ++  KY    +++   G  
Sbjct: 1416 LEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQKYEEGQAEL--EGAQ 1473

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   L+    + Q++++ +     +   S ++L +
Sbjct: 1474 KEARSLSTELFKMKNSYEETLD---QLETLKRENKNLQQEISDLTEQIGETGKSIHELEK 1530

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      EI R L +          
Sbjct: 1531 SKKAVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEIEQIKR 1590

Query: 278  --SKLTILEKTREQKTILS 294
               ++T   ++     + S
Sbjct: 1591 NSQRITDSMQSTLDSEVRS 1609



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 75/229 (32%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1208 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKN 1265

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++                  R L+ K   +  +   +     +   L+  +    
Sbjct: 1266 DENLRQLNDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEV 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1326 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1386 EELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLMI 1432



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 74/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + +  K      L   I+ E+S    L  K   L+   
Sbjct: 1058 EGDLKLAQESIMDLENDKQQSEEKLKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1117

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1118 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1171

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1172 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1226

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +       + +   +LE+  RT  D++S++        ++
Sbjct: 1227 KMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKNDENLRQ 1271


>gi|38177589|gb|AAF00096.2|AF114427_1 ventricular myosin heavy chain [Danio rerio]
          Length = 1938

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 76/197 (38%), Gaps = 5/197 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                    + +   L+  I+     L+  N     L+K   + ++ L ++  K+  + ++
Sbjct: 1409 VNAKCSSLEKTKHRLQNEIEDLMVDLERSNAAAAALDKKQRNFDKVLSEWKQKFEESQAE 1468

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            + +    +  R L  +L ++++ Y   LD       ++    + Q++++ +     +   
Sbjct: 1469 LESSQKEA--RCLSTELFKLKNSYEEALD---HLETMKRENKNLQEEISDLTEQLGEGGK 1523

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            S ++L +  + + +   E++  + E +  L H       A LEF+    +I R L +   
Sbjct: 1524 SIHELEKMRKQLEQEKSEIQSALEEAEASLEHEEGKILRAQLEFSQIKADIERKLAEKDE 1583

Query: 272  TFADEMSKLTILEKTRE 288
                    L     T +
Sbjct: 1584 EMEQSKRNLQRTIDTLQ 1600



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 76/202 (37%), Gaps = 5/202 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E+   ++  +   + L   +   K++ +   +  + +++  ++ +E++ D   +      
Sbjct: 1464 ESQAELESSQKEARCLSTELFKLKNSYEEALDHLETMKRENKNLQEEISDLTEQLGEGGK 1523

Query: 151  KVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFEK 208
             +  + +  + + L+ + + ++S +      LE  +  +LRA L   Q    + + L EK
Sbjct: 1524 SI--HELEKMRKQLEQEKSEIQSALEEAEASLEHEEGKILRAQLEFSQIKADIERKLAEK 1581

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            +   +      +R +      L      +   LR I +  +    E    L + +R   +
Sbjct: 1582 DEEMEQSKRNLQRTIDTLQSSLESETRSRNEALR-IKKKMEGDLNEMEIQLSQANRQAAE 1640

Query: 269  NQRTFADEMSKLTILEKTREQK 290
             Q+      + +   +   +  
Sbjct: 1641 AQKQLKSVHAHMKDAQLQLDDS 1662



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 77/214 (35%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   LR  +D   S ++ +      LEK   S E+Q+ ++  KY
Sbjct: 1208 QIDNLQRVKQKLEKEKS--ELRLELDDVVSNMEHVVKTKANLEKMTRSLEDQMNEYKTKY 1265

Query: 146  HSTCS---------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                                   + R L+ K + +  +  +++    +   L+  L    
Sbjct: 1266 EEGQRCINDFTMQKSKLQSENGELSRQLEEKDSLVSQLTRSKMPYTQQIEDLKRQLEEET 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K  + + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1326 KAKSALAHAVQSARHDTDLLREQYEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L+E  + L Q  +   + +  +     + E+ 
Sbjct: 1386 EELEEAKKKLAQRLQETEEAVEAVNAKCSSLEKT 1419



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 70/228 (30%), Gaps = 31/228 (13%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            +        + +++     ++ E     ++ L+F   K D+  K  E  EE  ++   + 
Sbjct: 1534 QLEQEKSEIQSALEEAEASLEHEEGKILRAQLEFSQIKADIERKLAEKDEE--MEQSKRN 1591

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                       + S  RS    L   + +  +  ++E + S      +  QK L  +   
Sbjct: 1592 LQRTIDTLQSSLESETRSRNEALRIKKKMEGDLNEMEIQLSQANRQAAEAQKQLKSVHAH 1651

Query: 206  FEKNAVSQNDLNQQ-----------ERIVYKSTLELRENIHEQKNMLRHINELYDE---- 250
             +   +  +D  +            ER       EL E     +   R       E    
Sbjct: 1652 MKDAQLQLDDSLRTNEDLKENTAIVERRNNLLQAELEELRAALEQTERGRKLAEQELLDT 1711

Query: 251  ---------ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                      N    N  K++  D+ Q Q    + + +    E+  ++
Sbjct: 1712 SERVQLLHSQNTSLLNQKKKLETDISQLQTEVEEAVQECRNAEEKAKK 1759



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 19/181 (10%), Positives = 55/181 (30%), Gaps = 6/181 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E  ++ +  + +       I+  K            LE+A    E        K   + +
Sbjct: 1144 ELEEVSERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATAATLRKKQADSVA 1203

Query: 151  KV------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            ++             + +        +  +  N   +    + L  +  S +  +   K 
Sbjct: 1204 ELGEQIDNLQRVKQKLEKEKSELRLELDDVVSNMEHVVKTKANLEKMTRSLEDQMNEYKT 1263

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             +E+     ND   Q+  +     EL   + E+ +++  +         +  +  +++  
Sbjct: 1264 KYEEGQRCINDFTMQKSKLQSENGELSRQLEEKDSLVSQLTRSKMPYTQQIEDLKRQLEE 1323

Query: 265  D 265
            +
Sbjct: 1324 E 1324



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 72/224 (32%), Gaps = 19/224 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    L+    +  +  + +  K   I  L   I+ E++    L  K   L+   
Sbjct: 1058 EGDLKLTQESLMDLENDKQQLEERLKKKDFEISQLNGKIEDEQTICIQLQKKLKELQARI 1117

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE+L            +     ++     +  +L         ++++  K       
Sbjct: 1118 EELEEELEAERAARAKVEKQ--RADLARELEEVSERLEEAGGATAAQIEMNKKREAEFQK 1175

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            L    ++ T+                   +    S  EL E I   + + + + +   E 
Sbjct: 1176 LRRDLEEATLQHEATA---------ATLRKKQADSVAELGEQIDNLQRVKQKLEKEKSEL 1226

Query: 252  NLEFANYLK------EISRDLEQNQRTFADEMSKLTILEKTREQ 289
             LE  + +       +   +LE+  R+  D+M++     +  ++
Sbjct: 1227 RLELDDVVSNMEHVVKTKANLEKMTRSLEDQMNEYKTKYEEGQR 1270


>gi|86137115|ref|ZP_01055693.1| efflux transporter, RND family, MFP subunit [Roseobacter sp.
           MED193]
 gi|85826439|gb|EAQ46636.1| efflux transporter, RND family, MFP subunit [Roseobacter sp.
           MED193]
          Length = 411

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 77/254 (30%), Gaps = 25/254 (9%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           R+ +     ++S            S   A     Q +L   + L E+N  S    ++ +R
Sbjct: 103 RTREQAQAAVKSAEAALRGAHADLSAAEASRDLAQTELQRTEQLAERNIASPAAYDRAKR 162

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               S   ++            +     +                      F D      
Sbjct: 163 EFRISEARVQMAEAAIGTHEADLATAQAQLIG-------------------FEDFGIGAA 203

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           + ++ ++   + +P++G I+      S+      +P+M+I        I   +       
Sbjct: 204 LRDQAQDDIPLYAPVSGRILQVM-HQSATTLPAGEPIMEIGDIDGDLEIVVDLISSDAVQ 262

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           V +G    V                + +IDP    + + L  +E   V + I   + S++
Sbjct: 263 VTQGDPVQVE----DWGGVATLHGEVSRIDPFGITKVSALGVEE-QRVPVVIALASPSED 317

Query: 402 NIELRNGFPAEVLF 415
              L +G+  E   
Sbjct: 318 RAGLGHGYRVETRI 331


>gi|332760501|gb|EGJ90790.1| macrolide-specific efflux protein macA [Shigella flexneri 2747-71]
 gi|332768056|gb|EGJ98242.1| macA [Shigella flexneri 2930-71]
          Length = 263

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 3   LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRN 62

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 63  QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 121

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 122 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 174

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 175 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 213


>gi|218682112|ref|ZP_03529713.1| hypothetical protein RetlC8_24800 [Rhizobium etli CIAT 894]
          Length = 310

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 48 GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
          G +  + N   ++    GI++   V  G  + +G  LL  +   +   
Sbjct: 41 GRLRRDRNNKIVQRLEGGIMR---VSEGDTVKEGDILLILDPTASRSN 85


>gi|39997781|ref|NP_953732.1| HlyD family secretion protein [Geobacter sulfurreducens PCA]
 gi|39984673|gb|AAR36059.1| HlyD family secretion protein [Geobacter sulfurreducens PCA]
          Length = 357

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 33/97 (34%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V  G  +  G  +   +       +   +   +  +  I TE+S L    ++ 
Sbjct: 58  GRVREILVREGDFVTAGQVVAVMDTEVLEAQLREAEAYYRQTQTAIATERSQLAQRESEK 117

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                    RE +L++   ++  +        +S   
Sbjct: 118 AATVAVVGQREAELVNARKRWERSAELAAKGAMSQQE 154


>gi|148547407|ref|YP_001267509.1| RND family efflux transporter MFP subunit [Pseudomonas putida F1]
 gi|148511465|gb|ABQ78325.1| efflux transporter, RND family, MFP subunit [Pseudomonas putida F1]
          Length = 435

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 59/156 (37%), Gaps = 4/156 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +    N V ++S  +G +     + G ++  G  L   +       +   + ++  
Sbjct: 83  ALGTVTA-TNTVNVRSRVAGELVNIHFKEGQRVKAGDLLAEIDPRPYRIALQQAEGTLAQ 141

Query: 106 LRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            +  +   +  L     L  +  + ++  ++ + Q+  F G   +  ++V +  ++  + 
Sbjct: 142 NQAQLKNAQVDLARYKGLYAEDSIAKQTLDTAQAQVAQFQGLVKTNQAQVNDARLNLDFT 201

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            ++  ++    +    L     ++   AL+   Q +
Sbjct: 202 QIRAPISGRVGLRQLDLGNLVAANDTTALVVITQTE 237


>gi|57167635|ref|ZP_00366775.1| probable periplasmic protein Cj0606 [Campylobacter coli RM2228]
 gi|57020757|gb|EAL57421.1| probable periplasmic protein Cj0606 [Campylobacter coli RM2228]
          Length = 390

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 76/169 (44%), Gaps = 16/169 (9%)

Query: 20  MTLLSIIGIIGLITW-------SILLP------IEISVSSSGEILNEDNVVEIKSPFSGI 66
           + +L++ G+     +       + L        I  ++ + G++  +D V ++ +  SG 
Sbjct: 9   VVILALFGVGAYFIFFNDNEKITYLAQKVKKIDISQTIEAVGKVYAKDQV-DVGAQVSGQ 67

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I K  V+ GS + QG  +   +  +  + +D+ K  +++ + +++++K AL+  + +Y  
Sbjct: 68  IIKLYVDVGSHVKQGDLIAQIDKDKQQNDLDITKAQLESAKANLESKKVALEIASKQYQR 127

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            +K + ++   L +   + ++  +      ++ +   +      +++  
Sbjct: 128 EQKLYAAKASSLENLETQKNNFYT--LKANVAELNAQVVQLEITLKNAQ 174



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 6/167 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q +  +      K  LE+    ++++  L        E      N    +  ++ +   
Sbjct: 102 AQLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNFYTLKANVAELNA 161

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHSKLTY 329
                   L   +K     TI +P+ G ++             +Q    IV   +     
Sbjct: 162 QVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVD-EGQTVNANQNTPTIVRIANLDQME 220

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           +R ++    +  +K G    + F   +D  +K ++A I  IDP  +Q
Sbjct: 221 VRMEIAEADVGKIKIG--TELDFSLLSD-PQKTYQASIASIDPADTQ 264


>gi|332703145|ref|ZP_08423233.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332553294|gb|EGJ50338.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 390

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 83/299 (27%), Gaps = 20/299 (6%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            S   Q L    +  +    V   G    ++ + +       +   ++ L ++   ++  
Sbjct: 19  ASPAPQYLTAQAEITNLEETVLASGTLEAFKQVSVGAQVSGQVKSLKVALGDQ---VKQG 75

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               + D    +N       S   +  Q R    + L+       Q+ ML        + 
Sbjct: 76  QVIAEIDSLPQQNELRNAEASLESVRAQRRAKQATLLQAELEFKRQREMLAEDATSRQDY 135

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
               A  L     D+             +           I SP+ G +V          
Sbjct: 136 ESAQAT-LNATRADIAALDAQIVQASIAVDTARIDLGYTRITSPMDGVVVAI-VTKEGQT 193

Query: 312 AQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE----KKFKA 365
              +Q    IV  +      + A+++   +  V+ G           D R     +  + 
Sbjct: 194 VNAAQEAPTIVKVAQLDTMTVEAEISEADVVRVEPGQRVYFTILGEPDHRYEATLRSIEP 253

Query: 366 IIEKIDPIISQQDNNLQTQE----YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             E I    S   ++  +      YY  +  +      +   +LR    A+V      T
Sbjct: 254 APESIAYDESSSTSSSSSSSDEAIYYNGLFDVP-----NPGHKLRISMTAQVTIVLNET 307



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 58/140 (41%), Gaps = 4/140 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  +E +V +SG +     V  + +  SG +K  +V  G Q+ QG  +   + +   +
Sbjct: 30  AEITNLEETVLASGTLEAFKQV-SVGAQVSGQVKSLKVALGDQVKQGQVIAEIDSLPQQN 88

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFESREEQLLD-FLGKYHSTCSK 151
            +   + S++++R     +++ L    L  K      A ++   Q  +      ++T + 
Sbjct: 89  ELRNAEASLESVRAQRRAKQATLLQAELEFKRQREMLAEDATSRQDYESAQATLNATRAD 148

Query: 152 VFNYGISSVYRSLKMKLTRM 171
           +       V  S+ +   R+
Sbjct: 149 IAALDAQIVQASIAVDTARI 168


>gi|322504692|emb|CAM38554.2| hypothetical protein, unknown function [Leishmania braziliensis
            MHOM/BR/75/M2904]
          Length = 1441

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 79/215 (36%), Gaps = 7/215 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              E  +    ++ ++   + L   ++ +++  + L  + +      E    ++++   + 
Sbjct: 1040 RAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEKSAEAEKLAAEVVEQRAEA 1099

Query: 146  HSTCSKVFNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +++      +  +   L+ K      +    ++   ++  L A L   + +   + 
Sbjct: 1100 EKLAAELEEQRAEAEKLAAELEEKRAEAEKLAAELVEQRAEAEKLAAELEEQRAEAEKLA 1159

Query: 204  -NLFEKNAVSQ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              L E+ A ++    +L +Q     K   EL E   E + +   + E   EA  + A  L
Sbjct: 1160 AELVEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAE-KLAAEL 1218

Query: 260  KEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             E   + E+      ++ ++   L    E++   +
Sbjct: 1219 VEQRAEAEKLAVELEEQRAEAEKLAAELEEQRAEA 1253



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 73/210 (34%), Gaps = 7/210 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              E  +    ++ ++   + L   ++ +++  + L  +        E    +L +   + 
Sbjct: 1096 RAEAEKLAAELEEQRAEAEKLAAELEEKRAEAEKLAAELVEQRAEAEKLAAELEEQRAEA 1155

Query: 146  HSTCSKVFNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +++      +  +   L+ +      +     +   ++  L A L   + +   + 
Sbjct: 1156 EKLAAELVEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLA 1215

Query: 204  -NLFEKNAVSQ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              L E+ A ++    +L +Q     K   EL E   E + +   + E   EA  + A  L
Sbjct: 1216 AELVEQRAEAEKLAVELEEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAE-KLAAEL 1274

Query: 260  KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E   + E+     A   +K     + R+ 
Sbjct: 1275 VEQRAEAEKLAAEVAAFRAKRNAALEARDA 1304



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/203 (10%), Positives = 68/203 (33%), Gaps = 4/203 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              E  +    ++ K+   + L   ++ +++  + L  + +      E    +L +   + 
Sbjct: 1012 RAEAEKLAAELEEKRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEA 1071

Query: 146  HSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +++         +   +  +      +     +   ++  L A L   + +   + 
Sbjct: 1072 EKLAAELEEKSAEAEKLAAEVVEQRAEAEKLAAELEEQRAEAEKLAAELEEKRAEAEKLA 1131

Query: 204  -NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
              L E+ A ++    + E    ++  +L   + EQ+     +    +E   E      E+
Sbjct: 1132 AELVEQRAEAEKLAAELEEQRAEAE-KLAAELVEQRAEAEKLAAELEEQRAEAEKLAAEL 1190

Query: 263  SRDLEQNQRTFADEMSKLTILEK 285
                 + ++  A+   +    EK
Sbjct: 1191 EEQRAEAEKLAAELEEQRAEAEK 1213



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 77/215 (35%), Gaps = 7/215 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E  +    ++ K+   + L   +  +++  + L  + +      E    +L++   + 
Sbjct: 312 RAEAEKLAAELEEKRAEAEKLAAELVEQRAEAEKLAAELEEQRAEAEKLAAELVEQRAEA 371

Query: 146 HSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               +++         +   L+ +      +     +   ++  L A +   + +   + 
Sbjct: 372 EKLAAELEEKSAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAEVVEQRAEAEKLA 431

Query: 204 -NLFEKNAVSQ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             L E+ A ++    +L +Q     K   EL E   E + +   + E   EA  + A  L
Sbjct: 432 AELVEQRAEAEKLAVELEEQRAEAEKLAAELVEQRAEAEKLAAELEEQRAEAE-KLAVEL 490

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           +E   + E+      ++ ++   L    E++   +
Sbjct: 491 EEQRAEAEKLAAELEEKRAEAEKLAAELEEQRAEA 525



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 71/199 (35%), Gaps = 7/199 (3%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            ++ ++   + L   ++ +++  + L  + +      E    +L +   +     +++  
Sbjct: 489 ELEEQRAEAEKLAAELEEKRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEE 548

Query: 155 --YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAV 211
                  +   L+ +      +     +   ++  L A +   + +   +   L E+ A 
Sbjct: 549 KSAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAEVVEQRAEAEKLAAELVEQRAE 608

Query: 212 SQ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           ++    +L +Q     K   EL E   E + +   + E   EA  + A  L+E   + E+
Sbjct: 609 AEKLAVELEEQRAEAEKLAAELVEQRAEAEKLAAELVEQRAEAE-KLAAELEEQRAEAEK 667

Query: 269 NQRTFADEMSKLTILEKTR 287
                 ++ ++   L    
Sbjct: 668 LAAELEEQRAEAEKLAAEL 686



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 61/178 (34%), Gaps = 6/178 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E  +    ++ ++   + L   ++ + +  + L  + +      E    +L +   + 
Sbjct: 522 RAEAEKLAAELEEQRAEAEKLAAELEEKSAEAEKLAAELEEQRAEAEKLAAELEEQRAEA 581

Query: 146 HSTCSKVFNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               ++V      +  +   L  +      + +   +   ++  L A L   + +   + 
Sbjct: 582 EKLAAEVVEQRAEAEKLAAELVEQRAEAEKLAVELEEQRAEAEKLAAELVEQRAEAEKLA 641

Query: 204 -NLFEKNAVSQ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             L E+ A ++    +L +Q     K   EL E   E + +   + E   EA    A 
Sbjct: 642 AELVEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELVEQRAEAEKLAAE 699



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 52/154 (33%), Gaps = 2/154 (1%)

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           + E +      +  +   +        +   L+ K      +    ++   ++  L A L
Sbjct: 291 AAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEKRAEAEKLAAELVEQRAEAEKLAAEL 350

Query: 193 SSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
              + +   +   L E+ A ++    + E    ++  +L   + EQ+     +    +E 
Sbjct: 351 EEQRAEAEKLAAELVEQRAEAEKLAAELEEKSAEAE-KLAAELEEQRAEAEKLAAELEEQ 409

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             E      E+     + ++  A+ + +    EK
Sbjct: 410 RAEAEKLAAEVVEQRAEAEKLAAELVEQRAEAEK 443



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/198 (10%), Positives = 61/198 (30%), Gaps = 8/198 (4%)

Query: 92  TTDLIDLKKVSIKNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             ++   +      L     D     L+      +   +A + R+       G  ++   
Sbjct: 222 AAEVAAFRAKRNAALEARDADGTLPVLEKAVAADEAAAQALDPRQIA----DGPLYAVTL 277

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +    ++V +       +         +LE + +    L +  ++     + L  +  
Sbjct: 278 EEYRDRDAAVGQLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEKRAEAEKLAAELV 337

Query: 211 VSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             + +  +    + +   E   L   + EQ+     +    +E + E      E+     
Sbjct: 338 EQRAEAEKLAAELEEQRAEAEKLAAELVEQRAEAEKLAAELEEKSAEAEKLAAELEEQRA 397

Query: 268 QNQRTFADEMSKLTILEK 285
           + ++  A+   +    EK
Sbjct: 398 EAEKLAAELEEQRAEAEK 415



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 44/133 (33%), Gaps = 2/133 (1%)

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVS 212
                  +   L  +      +    ++   ++  L A L   + +   +   L E+ A +
Sbjct: 956  RAEAEKLAAELVEQRAEAEKLAAELVEQRAEAEKLAAELVEQRAEAEKLAAELVEQRAEA 1015

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            +    + E    ++  +L   + EQ+     +    +E   E      E+     + ++ 
Sbjct: 1016 EKLAAELEEKRAEAE-KLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKL 1074

Query: 273  FADEMSKLTILEK 285
             A+   K    EK
Sbjct: 1075 AAELEEKSAEAEK 1087


>gi|320180596|gb|EFW55525.1| Macrolide-specific efflux protein MacA [Shigella boydii ATCC 9905]
          Length = 302

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 3   LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 62

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 63  QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 121

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 122 SEADVIHLKAGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 174

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 175 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 213


>gi|325109902|ref|YP_004270970.1| efflux transporter RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
 gi|324970170|gb|ADY60948.1| efflux transporter, RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
          Length = 414

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 78/228 (34%), Gaps = 17/228 (7%)

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              Q D +  + L  + A +   + Q +    +S  +L E   ++    R  N   D+  
Sbjct: 124 KLIQLDESRNRELVAE-AEAAFHVAQAQLEAKQSASDLAELEWQRMLRFRDSNIYTDQQR 182

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            +          ++           +     +    + TI SP++G ++  +   + + A
Sbjct: 183 TQMRTNRDISMAEVALAAAQVEAARAVWQSRKLELGELTIKSPMSG-VLAERMAEAGDLA 241

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +   PL+ +V   ++  I   V+    Q ++ G  AT+R     +     F+  +    P
Sbjct: 242 KSDLPLLTLVNIDEVRII-VNVSEVDYQLIRPGQKATIRLDAIPNQ---DFEGNVAVKAP 297

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           ++                  + ++A  +   +L+ G  A       + 
Sbjct: 298 VLDPATRTA-----------VIEIAVMNPEHKLKPGMHARATVVCSSR 334


>gi|307730164|ref|YP_003907388.1| efflux transporter RND family, MFP subunit [Burkholderia sp.
           CCGE1003]
 gi|307584699|gb|ADN58097.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
           CCGE1003]
          Length = 497

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 54/145 (37%), Gaps = 4/145 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + +++ G +    +V  +    SG +++   + G  + +G  L   +      
Sbjct: 118 ATQGEMPVVLTALGTVTPLASV-TVLPQLSGTLQEVYFKEGQMVKKGDLLAQIDPRPYQI 176

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +D  + ++      + T +  L     L ++  +  +  +++   +  + G   S  + 
Sbjct: 177 SLDNAQGTLARDEALLQTARLDLKRYQTLLSQDSIASQQVDTQASLVRQYEGTVKSDKAN 236

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYL 176
           V  Y +  VY  +   ++    +  
Sbjct: 237 VDTYKLDLVYARITAPVSGRVGLRQ 261


>gi|258592644|emb|CBE68953.1| putative Heavy metal efflux pump, CzcB family [NC10 bacterium
           'Dutch sediment']
          Length = 420

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 77/241 (31%), Gaps = 35/241 (14%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R +L      L AL+  H++     K L EK A+++ +++ +E         +       
Sbjct: 131 RGELAELQKDL-ALMEHHREMWERAKLLLEKEAIARKEVHIRETEYLVEKAAVESRYARI 189

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
                 +            N   E   + ++              L        + +PI+
Sbjct: 190 ARAREKL------IRFGMTNEQIEGLVNRQE------------RALPPETSHTIVRAPIS 231

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I+  +  +        + L+ I   + +  +   +  K +  V++G  A +    Y  
Sbjct: 232 GVIIK-REGAPGEVVGPEKELLAIADLTSIWTL-VDIYEKDLGQVRRGTAAEINVEAYPG 289

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                F+  I  +  ++             +  ++I +        +L+ G  A V   A
Sbjct: 290 ET---FRGTISYVSDLLDPDTRTA------KARVEIPNPQR-----KLKLGMFATVRLRA 335

Query: 418 K 418
           +
Sbjct: 336 R 336



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 47/121 (38%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I++  V+ G  + QGTPL  +++IE  + I   +  +  L+  +   +   +      
Sbjct: 96  GRIERVYVQVGDAVNQGTPLFGYDNIELGEAIGDYRGELAELQKDLALMEHHREMWERAK 155

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +LEK   +R+E  +          +    Y   +  R   ++           ++ + +
Sbjct: 156 LLLEKEAIARKEVHIRETEYLVEKAAVESRYARIARAREKLIRFGMTNEQIEGLVNRQER 215

Query: 185 S 185
           +
Sbjct: 216 A 216


>gi|293417027|ref|ZP_06659664.1| inner membrane protein yiaV [Escherichia coli B185]
 gi|331655216|ref|ZP_08356215.1| inner membrane protein YiaV [Escherichia coli M718]
 gi|284923621|emb|CBG36718.1| HlyD-family secretion protein [Escherichia coli 042]
 gi|291431603|gb|EFF04588.1| inner membrane protein yiaV [Escherichia coli B185]
 gi|331047231|gb|EGI19309.1| inner membrane protein YiaV [Escherichia coli M718]
          Length = 378

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMVANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMVANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|294931521|ref|XP_002779916.1| liver stage antigen-1, putative [Perkinsus marinus ATCC 50983]
 gi|239889634|gb|EER11711.1| liver stage antigen-1, putative [Perkinsus marinus ATCC 50983]
          Length = 872

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 105/271 (38%), Gaps = 33/271 (12%)

Query: 35  SILLPIEISVSSSG-----EILNEDNVVEIK-SPFSGIIKKFQVENGSQILQGTPLLTFE 88
           + LL +E +  + G     E+ ++  +  ++    SG           ++ Q    L  E
Sbjct: 328 AALLELEEARRALGIALDKELESQRKIRLLQKQLESG-------REAQEVKQ----LRRE 376

Query: 89  DIETTDLID----LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
              T + ++      +  I+ L+  +  E  A D   N+ +VLE+  E +     + L  
Sbjct: 377 LSGTKEKLEKVEAEAREKIRTLQRELALELEAKDEALNQNEVLEEKLERKHASQEEALDN 436

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             S   ++     +   R+L+ +  + R +   R D +   S+ + L + +Q  +  ++ 
Sbjct: 437 MKSLRKEL--KKKTERLRALQQQQQQQREMTGMRDD-KRVVSMEQELQTENQNVMRSLRR 493

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             E+  V+  +L  Q      S   LR    E +N  R        A L     L E++ 
Sbjct: 494 ELERKDVTMKNLRDQLEKAKGSMGALRAEKEEARNASRQ-------AVLRLEGELAEVTA 546

Query: 265 DLEQ--NQRTFADEMSKLTILEKTREQKTIL 293
            L++   ++  AD   +   +EK   +  I+
Sbjct: 547 KLKEFKEEQEAADARWQEAQVEKQAREAEIV 577



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 68/206 (33%), Gaps = 16/206 (7%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             +   +T  +       +  R         L+       + ++    RE Q +  L + 
Sbjct: 317 RIDPAPSTTSVAALLELEEARRALGIALDKELESQRKIRLLQKQLESGREAQEVKQLRRE 376

Query: 146 HSTCSKVF-------NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            S   +            I ++ R L ++L            LE K   L    +S ++ 
Sbjct: 377 LSGTKEKLEKVEAEAREKIRTLQRELALELEAKDEALNQNEVLEEK---LERKHASQEEA 433

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L  MK+L  K    + +  +  +   +   E+     +     + +  +  E   E  N 
Sbjct: 434 LDNMKSL-RKELKKKTERLRALQQQQQQQREMTGMRDD-----KRVVSMEQELQTENQNV 487

Query: 259 LKEISRDLEQNQRTFADEMSKLTILE 284
           ++ + R+LE+   T  +   +L   +
Sbjct: 488 MRSLRRELERKDVTMKNLRDQLEKAK 513


>gi|227546897|ref|ZP_03976946.1| antimicrobial peptide ABC superfamily ATP binding cassette
           transporter, permease protein [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|227212577|gb|EEI80465.1| antimicrobial peptide ABC superfamily ATP binding cassette
           transporter, permease protein [Bifidobacterium longum
           subsp. infantis ATCC 55813]
          Length = 1253

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 26/225 (11%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E    ++  K  + + R  +D  ++ L     K +      +    Q+   L       +
Sbjct: 426 EARTQLESGKAQLTSARKQLDAAQTELTANRTKIEQGITQIDQGMAQIDQMLPMIQQANN 485

Query: 151 KVFN------------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS-HQK 197
            +                I  +   L + +  + SI   R  L  K + L+    S  Q+
Sbjct: 486 LLAQLDPNIDLNSPTWQAIKQLLARLGITVPEVPSISDLRQQLTAKQTELQTQRDSLAQQ 545

Query: 198 DLTMMKNLFEKNAVSQNDLNQQ-------ERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + + L E  A +Q+ L+QQ       E+       +L     E +     +     +
Sbjct: 546 KADLQRTLNETIAPAQSTLDQQNAQLTAKEQEAAAGEAQLNTKSAELEANAATLETQSAQ 605

Query: 251 ANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              + A        L+E  R L++ ++  AD  +KL   +   + 
Sbjct: 606 LEAQAAQLASGKRQLEEGERQLKEGEQQLADGKAKLDDAQSALDA 650


>gi|54298017|ref|YP_124386.1| chemiosmotic efflux system protein B-like protein [Legionella
           pneumophila str. Paris]
 gi|53751802|emb|CAH13226.1| Chemiosmotic efflux system protein B-like protein [Legionella
           pneumophila str. Paris]
          Length = 322

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 59/190 (31%), Gaps = 22/190 (11%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           K        I +   +   I +L  +A  + +  +      ++ N         +L  ++
Sbjct: 57  KVVQATHRPIAQLLGLNGQI-QLLPDAQADVSIRISGSVTAIDVNLGDSVKAGQRLATVQ 115

Query: 285 KTRE-----QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                       + +PIAG I   ++ +     + +  L  I  +     + A+V  + +
Sbjct: 116 SRLVGNPPPSVAVNAPIAGII-DARNINLGQAVEPNTVLFHIS-NRDKLLVVAQVYEEDL 173

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             VK G    V    Y           +  I+P +              V ++IT     
Sbjct: 174 GKVKVGQEVNVHVLSYPKQTFP---GQVTLIEPNLDPLTRT--------VNVRIT---LD 219

Query: 400 DNNIELRNGF 409
           +    L+ G 
Sbjct: 220 NKEGLLKPGM 229


>gi|218767670|ref|YP_002342182.1| putative periplasmic protein [Neisseria meningitidis Z2491]
 gi|121051678|emb|CAM07981.1| putative periplasmic protein [Neisseria meningitidis Z2491]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATAKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 79/262 (30%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        +    E      + L     ++ + +         +
Sbjct: 112 LVSAQIALGSAEKKYKRQAALWKDDATAKEDLESAQDALAAAKANVAELKALIRQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 172 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 230

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 231 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 287

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 288 SFVP-----NPDGKLATGMTTQ 304


>gi|300904491|ref|ZP_07122332.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           84-1]
 gi|301303157|ref|ZP_07209283.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           124-1]
 gi|300403557|gb|EFJ87095.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           84-1]
 gi|300841566|gb|EFK69326.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           124-1]
 gi|315257555|gb|EFU37523.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           85-1]
          Length = 285

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V   DL            EL     +       + +  +EAN           
Sbjct: 59  NIKDNQLVKAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 117

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 118 AEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 176

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 177 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 227

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 228 RAIYDQS 234



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 48/160 (30%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVKAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +         T  ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRA 156


>gi|254703455|ref|ZP_05165283.1| RND family efflux transporter MFP subunit [Brucella suis bv. 3 str.
           686]
 gi|261754085|ref|ZP_05997794.1| efflux transporter [Brucella suis bv. 3 str. 686]
 gi|261743838|gb|EEY31764.1| efflux transporter [Brucella suis bv. 3 str. 686]
          Length = 408

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 15/210 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q D  + + +   + L L++    ++  L     +      +    L     +++    
Sbjct: 127 AQLDNLKAQLLSKDAQLTLKKFNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNV 186

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
               + ++L   +      +I SP+ GT+V   +          Q    IV  + L    
Sbjct: 187 QIRQQEAQLASDKVDLGYTSIYSPMEGTVVDEAA-KEGETLNAVQSAPTIVTVADLKVMT 245

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A+V+   I  +K G      F        K+F   + +I P  +  +N +    YY +
Sbjct: 246 VEAQVSEADISKLKPGMPVY--FTLLGQPD-KRFTGTLRQIKPTPATDNNVVL---YYAL 299

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                     +   EL     A+V F    
Sbjct: 300 F------DVPNPTGELMIDMSAQVYFVLGE 323



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 61/186 (32%), Gaps = 21/186 (11%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW-------------SILLP------IEISVSSS 47
            + ++      +    LS   II    W             S L        IE ++++ 
Sbjct: 15  ASARKRAKGKRRWWLWLSAAAIIIGAGWYFYGSYKADGEKSSYLAETVTRGDIENAITAV 74

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G + +    V + +  SG +K  +VE G  + QG  +   +       +++    + NL+
Sbjct: 75  GTL-SALRSVNVGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIAGAQLDNLK 133

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             + ++ + L          +    +R   Q            ++     ++   R  + 
Sbjct: 134 AQLLSKDAQLTLKKFNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNVQIRQQEA 193

Query: 167 KLTRMR 172
           +L   +
Sbjct: 194 QLASDK 199


>gi|148559217|ref|YP_001259527.1| secretion protein HlyD [Brucella ovis ATCC 25840]
 gi|148370474|gb|ABQ60453.1| secretion protein HlyD [Brucella ovis ATCC 25840]
          Length = 408

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 70/210 (33%), Gaps = 15/210 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q D  + + +   +   L++    ++  L     +      +    L     +++    
Sbjct: 127 AQLDNLKAQLLSKDAQRTLKKLNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNA 186

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
               + ++L   +      +I SP+ GT+V   +          Q    IV  + L    
Sbjct: 187 QIRQQEAQLASDKVDLGYTSIYSPMEGTVVDEAA-KEGETLNAVQSAPTIVTVADLKVMT 245

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A+V+   I  +K G      F        K+F   + +I P  +  +N +    YY +
Sbjct: 246 VEAQVSEADISKLKPGMPVY--FTLLGQPD-KRFTGTLRQIKPTPATDNNVVL---YYAL 299

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                     +   EL     A+V F    
Sbjct: 300 F------DVPNPTGELMIDMSAQVYFVLGE 323



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 67/193 (34%), Gaps = 29/193 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW-------------SILLP------IEISVSSS 47
            + ++      +    LS   II    W             S L        IE ++++ 
Sbjct: 15  ASARKRAKGKRRWWLWLSAAAIIIGAGWYFYGSYKADGEKSSYLAETVTRGDIENAITAV 74

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G + +    V + +  SG +K  +VE G  + QG  +   +       +++    + NL+
Sbjct: 75  GTL-SALRSVNVGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIAGAQLDNLK 133

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             + ++ +           L+K   +R++ LL   G   +T  +  N  +      +K  
Sbjct: 134 AQLLSKDAQR--------TLKKLNAARQKSLLATRGVSQATVDQA-NADLLMAEAEVKAL 184

Query: 168 LTRMRSIYLNRLD 180
             ++R        
Sbjct: 185 NAQIRQQEAQLAS 197


>gi|240081221|ref|ZP_04725764.1| MacA [Neisseria gonorrhoeae FA19]
 gi|260439965|ref|ZP_05793781.1| MacA [Neisseria gonorrhoeae DGI2]
 gi|268597332|ref|ZP_06131499.1| macrolide-specific efflux protein MacA [Neisseria gonorrhoeae FA19]
 gi|291043251|ref|ZP_06568974.1| macrolide-specific efflux protein MacA [Neisseria gonorrhoeae DGI2]
 gi|56385100|gb|AAV85981.1| MacA [Neisseria gonorrhoeae]
 gi|268551120|gb|EEZ46139.1| macrolide-specific efflux protein MacA [Neisseria gonorrhoeae FA19]
 gi|291012857|gb|EFE04840.1| macrolide-specific efflux protein MacA [Neisseria gonorrhoeae DGI2]
          Length = 392

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++++
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLNME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQTALWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 63/212 (29%), Gaps = 21/212 (9%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQ 270
           ++ L   +  +  + + L     + K        +    E      + L     ++ + +
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQTALWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLT 328
                    +   E       I + + GT+V             +Q    IV  +   + 
Sbjct: 162 ALIRQSKISINTAESDLGYTRITATMDGTVVAIPV-EEGQTVNAAQSTPTIVQLANLDMM 220

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNN 380
             + ++    I  VK G    + F   ++      KA ++ +DP ++           + 
Sbjct: 221 LNKMQIAEGDITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDT 277

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                YY     +      + + +L  G   +
Sbjct: 278 ASNAVYYYARSFVP-----NPDGKLATGMTTQ 304


>gi|72381992|ref|YP_291347.1| DevB-like secretion protein [Prochlorococcus marinus str. NATL2A]
 gi|72001842|gb|AAZ57644.1| DevB-like secretion protein [Prochlorococcus marinus str. NATL2A]
          Length = 305

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 59/205 (28%), Gaps = 25/205 (12%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + E  +  +   L   + E +   R IN  +   E        L ++  DL  ++   + 
Sbjct: 105 KLEANLKSAKANLNILMSEIRIKKREINRYQTLLEKGAVAEIVLDKMKDDLFISETKISK 164

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSF-----SSSNYAQQSQPLMKIVPHSKLTYI 330
             + +  +    EQ  + SPI G ++          +SS               S    I
Sbjct: 165 LKAAIDAINVDLEQTQLKSPIDGIVLQILVREGERPNSSGVINVGAN------QSMEALI 218

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP------IISQQDNNLQTQ 384
               +   I  V+ G    +                +  I P      ++S         
Sbjct: 219 EVYES--DIDRVQMGQAVDLI--SENGGFNGSLSGQVTLISPQVRQRRVLSTDPTGDADS 274

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
              EV +K+ + +     +    G 
Sbjct: 275 RVVEVRVKLDNSSAKK--VSHLTGM 297



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 84/248 (33%), Gaps = 18/248 (7%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSG-----IIKKFQVENGSQILQGTPLLTFEDI-ETTDL 95
             V++ G++     V ++ +P SG      + K  +  G  I++   L  F++  +    
Sbjct: 50  EGVAALGQLNPFGEVRKLAAPNSGKGGTPRLSKLLIREGDSIIKDQILAVFDNRPKLEAN 109

Query: 96  IDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +   K ++  L   I  +K  +     L  K  V E   +  ++ L     K     + +
Sbjct: 110 LKSAKANLNILMSEIRIKKREINRYQTLLEKGAVAEIVLDKMKDDLFISETKISKLKAAI 169

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               +      LK  +  +    L R      SS +  + ++       M+ L E   V 
Sbjct: 170 DAINVDLEQTQLKSPIDGIVLQILVREGERPNSSGVINVGANQ-----SMEALIE---VY 221

Query: 213 QNDLNQQE-RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++D+++ +         E           +  I+    +  +   +   +    + + + 
Sbjct: 222 ESDIDRVQMGQAVDLISENGGFNGSLSGQVTLISPQVRQRRVLSTDPTGDADSRVVEVRV 281

Query: 272 TFADEMSK 279
              +  +K
Sbjct: 282 KLDNSSAK 289


>gi|302879023|ref|YP_003847587.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
 gi|302581812|gb|ADL55823.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
          Length = 354

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 77/207 (37%), Gaps = 20/207 (9%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L   E     +  E    + +       I +L++   +      + ++ +    +     
Sbjct: 94  LQANEAESQAALRESEAVLADASANAARIRKLFESGFVSAQQAGQAVTLE-NTARAKLDA 152

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
           + ++L +  +   Q+ I +P AG I   ++ +     Q +  L +++         A VT
Sbjct: 153 QRARLKVSAQRLAQQNITAPDAGVI-SARNATVGAITQPAAELFRLI-RQGRLEWHADVT 210

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
             ++  +KKG    +        + K  + ++  + P I+QQ        Y +V++ +  
Sbjct: 211 ADELGLIKKGMKVEL-----TTAQGKPVQGVVRAVSPAINQQTR------YGQVLVNLPA 259

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNTTL 422
            +      EL  G  A+ +F A   T 
Sbjct: 260 DS------ELVAGMFAKGVFLAGENTA 280



 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 65/209 (31%), Gaps = 9/209 (4%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           ++G I+     +         I   +V  G ++++G  L T  +          + +++ 
Sbjct: 48  ANGSIVAWQEAIIGSEITGVRIADVRVSVGDEVVRGQVLATLANDTLQANEAESQAALRE 107

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
               +    +    +     + E  F S ++           T        + +    LK
Sbjct: 108 SEAVLADASANAARIR---KLFESGFVSAQQ------AGQAVTLENTARAKLDAQRARLK 158

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           +   R+    +   D    S+    + +  Q    + + + +       D+   E  + K
Sbjct: 159 VSAQRLAQQNITAPDAGVISARNATVGAITQPAAELFRLIRQGRLEWHADVTADELGLIK 218

Query: 226 STLELRENIHEQKNMLRHINELYDEANLE 254
             +++     + K +   +  +    N +
Sbjct: 219 KGMKVELTTAQGKPVQGVVRAVSPAINQQ 247


>gi|260548879|ref|ZP_05823101.1| nodulation protein [Acinetobacter sp. RUH2624]
 gi|260408047|gb|EEX01518.1| nodulation protein [Acinetobacter sp. RUH2624]
          Length = 372

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 79/212 (37%), Gaps = 11/212 (5%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +R++  + +  +  ++      +  QK       +   N  +   L Q E  +  +  + 
Sbjct: 67  IRAVQRSSIQAQVSATATSVNANVGQKVQKGQVLVRLNNQDNAARLAQAEANLASAQAQA 126

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
               +      R +N+ +  A +EF     +    LE  +   A+    + I +K     
Sbjct: 127 ELARNLMNRKQRLLNQGFI-ARVEFEQSQVDYKGQLESVRAQQAN----VDIAKKADRDG 181

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I SPI+G I   Q           Q L +IV +     I+AK+  +Q   +K G +   
Sbjct: 182 IITSPISGVITKRQV-EPGQTVSVGQTLFEIV-NPDQLEIQAKLPIEQQSALKVGSSIQY 239

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           +         K+  AI+ ++ P+  Q    ++
Sbjct: 240 QI----QGNSKQLHAILTRVSPVADQDSRQIE 267



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 12/104 (11%), Positives = 39/104 (37%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
               I++  S          G ++ +G  L+   + +    +   + ++ + +   +  +
Sbjct: 71  QRSSIQAQVSATATSVNANVGQKVQKGQVLVRLNNQDNAARLAQAEANLASAQAQAELAR 130

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           + ++      +    A    E+  +D+ G+  S  ++  N  I+
Sbjct: 131 NLMNRKQRLLNQGFIARVEFEQSQVDYKGQLESVRAQQANVDIA 174


>gi|120553078|ref|YP_957429.1| RND family efflux transporter MFP subunit [Marinobacter aquaeolei
           VT8]
 gi|120322927|gb|ABM17242.1| efflux transporter, RND family, MFP subunit [Marinobacter aquaeolei
           VT8]
          Length = 455

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 59/190 (31%), Gaps = 26/190 (13%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L +  E    A       L E + +        A  +S+L      +   T+ +P +G 
Sbjct: 162 TLVNAQEELLLAMNRGNQKLVEAATERLAALNVPASLISRLRQSRDIQRTMTVYAPRSGV 221

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHY 355
           I          + +    ++ I    ++  I     ++++      V+ G    +     
Sbjct: 222 IENLNVR-EGMFIKPGDRVLSIAALDEVWLIGEVFESQLS-----AVEAGNRVQMTL--- 272

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  ++++  ++ + P ++ +           V ++     F + +  L  G  A +  
Sbjct: 273 DYMPGREWRGSVDYVYPEVNPKTRTA------RVRMR-----FDNEDGALMPGMFARLEV 321

Query: 416 TA--KNTTLA 423
                     
Sbjct: 322 QGERGKRQFL 331



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 58/159 (36%), Gaps = 5/159 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQVE-NGSQILQGTPLLTF-EDIETTD 94
             +  ++++ G +  +++ +    P   G I+   V+  G  + QG PL T         
Sbjct: 107 GRLPNNITTVGYVAYDEDQMVHVHPRVDGWIETLFVKAEGEPVEQGKPLYTLYSPTLVNA 166

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +L     +  +  ++     L  LN    ++ +  +SR+ Q    +    S   +  N
Sbjct: 167 QEELLLAMNRGNQKLVEAATERLAALNVPASLISRLRQSRDIQRTMTVYAPRSGVIENLN 226

Query: 155 YGISSVYR--SLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                  +     + +  +  ++L     E++ S + A 
Sbjct: 227 VREGMFIKPGDRVLSIAALDEVWLIGEVFESQLSAVEAG 265


>gi|332975876|gb|EGK12753.1| RND family efflux transporter MFP subunit [Psychrobacter sp.
           1501(2011)]
          Length = 435

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 57/189 (30%), Gaps = 17/189 (8%)

Query: 203 KNLFEKN-AVSQNDLNQ------QERIVYKSTLELRENIHEQKNMLRHINELY--DEANL 253
           + L ++   V +  +         ++ + ++  EL E         R    +    + N 
Sbjct: 140 RVLVKEGDQVKRGQVLAIFDTDAMQQQLIQARAELAEAESSYDLAKRDAERVLPLLKINA 199

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                         Q   + A   ++L       +   + +P++G I    +    +   
Sbjct: 200 ISQQEADRYVATANQASASVAASRARLNNQNLNMQNAKVTAPVSGVISEKTAN-VGSVPG 258

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             +PL  I+        +A+V P ++  +  G    V  P       K     + +I P 
Sbjct: 259 P-EPLFTII-EEGKLEWQAQVDPNKVGQINVGTPVEVSLP-----NNKSVMGKVSRISPT 311

Query: 374 ISQQDNNLQ 382
                  + 
Sbjct: 312 AEDGSRQIT 320



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 24/76 (31%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           ++ G I  E             I +  V+ G Q+ +G  L  F+       +   +  + 
Sbjct: 116 TADGTISPETTSSVSGKVNGVAIDRVLVKEGDQVKRGQVLAIFDTDAMQQQLIQARAELA 175

Query: 105 NLRCHIDTEKSALDFL 120
                 D  K   + +
Sbjct: 176 EAESSYDLAKRDAERV 191


>gi|312376688|gb|EFR23703.1| hypothetical protein AND_12409 [Anopheles darlingi]
          Length = 1287

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 72/204 (35%), Gaps = 1/204 (0%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           ET   I+ +    +     + +E+  L+    + + L +  E   E+L     K      
Sbjct: 431 ETVATIERRITEKEQQSAALQSERDELERKVQQTETLLREREKEIERLEQQQSKSTQEAE 490

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +        + ++        ++  L++  L   +  L A    H +D    +   +   
Sbjct: 491 QGQQETTKKLQQAEDELAACRKTQSLDQEKLLELTKALDAAKELHDRDRKSNEASLKDVF 550

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              N+L++Q     +   +L     +       +    +E + E     +E+ + L   +
Sbjct: 551 ERNNELSEQLDQFKEKLEKLNAKFKKLTEEKNGLRAANEELSAELKQSRQEL-KQLASQK 609

Query: 271 RTFADEMSKLTILEKTREQKTILS 294
           +   +E+  L I+ +  E + + S
Sbjct: 610 QALTEEVRNLKIINENSESEALRS 633



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 77/198 (38%), Gaps = 11/198 (5%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +   + ++  +  +      LD+   +        E +   L +  G   +    +  
Sbjct: 341 DFERTIMELEKDKQQLKATNLTLDYEKGELQKKLGESEGKLATLTEEHGSLSTQLKNLEQ 400

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               S+  +     + + S+     + + ++      +++ ++ +T  +   +++A  Q+
Sbjct: 401 TTAQSLSNT-----SELESLKQQLEEAKQRAETSSETVATIERRITEKE---QQSAALQS 452

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA---NLEFANYLKEISRDLEQNQR 271
           + ++ ER V ++   LRE   E + + +  ++   EA     E    L++   +L   ++
Sbjct: 453 ERDELERKVQQTETLLREREKEIERLEQQQSKSTQEAEQGQQETTKKLQQAEDELAACRK 512

Query: 272 TFADEMSKLTILEKTREQ 289
           T + +  KL  L K  + 
Sbjct: 513 TQSLDQEKLLELTKALDA 530


>gi|302188906|ref|ZP_07265579.1| secretion protein HlyD [Pseudomonas syringae pv. syringae 642]
          Length = 391

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 64/204 (31%), Gaps = 24/204 (11%)

Query: 35  SILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           + +  IE +V++ G +  +      + +  SG ++  +V+ G ++ +   L   + +   
Sbjct: 50  AEVADIEYAVTAQGVL--QGRNQVDVGAQVSGQLQSLKVKPGDKVKRNQLLAEIDPLPAR 107

Query: 94  DLIDLKKVSIKNLRC-----------------HIDTEKSALDFLNNKYDVLEKAFESREE 136
           + +    V I+ L                         S         D      ES+  
Sbjct: 108 NALRQAVVRIEQLTAERDATLHKLKLAESNDRRYQALGSTTAVSKADQDKARFKLESQRA 167

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            L     + H+   K     I   Y  +   +       + +       +++    +   
Sbjct: 168 NLASLTAQLHTAHVKEEAARIKLDYTRIFAPMDGQVLAIVTQEG----QTVIADQTAPVI 223

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQE 220
             +  +  +  K  VS+ D+ + +
Sbjct: 224 LKMAQLDTMTVKAQVSEADVLKIK 247



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 76/289 (26%), Gaps = 22/289 (7%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               VF    + V         +      N++D+  + S     L     D      L  
Sbjct: 40  EEETVFLSAAAEVADIEYAVTAQGVLQGRNQVDVGAQVSGQLQSLKVKPGDKVKRNQLLA 99

Query: 208 K-----------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           +            AV + +    ER      L+L E+   +   L     +      +  
Sbjct: 100 EIDPLPARNALRQAVVRIEQLTAERDATLHKLKLAESNDRRYQALGSTTAVSKADQDKAR 159

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             L+    +L            K        +   I +P+ G ++              Q
Sbjct: 160 FKLESQRANLASLTAQLHTAHVKEEAARIKLDYTRIFAPMDGQVLAI-VTQEGQTVIADQ 218

Query: 317 PLMKIVP--HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               I+         ++A+V+   +  +K G       P   D R       IE      
Sbjct: 219 TAPVILKMAQLDTMTVKAQVSEADVLKIKPGLAVYFSVPGDPDTRYNATLKAIEPAPLAA 278

Query: 375 SQQDNNLQTQE---YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + Q           +Y  +  + +L    N   +     A+V    +  
Sbjct: 279 ASQSGATGENSKAVFYNALFDVPNLE---NRFYIN--MTADVRIVLEAK 322


>gi|241206444|ref|YP_002977540.1| efflux transporter, RND family, MFP subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|240860334|gb|ACS58001.1| efflux transporter, RND family, MFP subunit [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 379

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 59/190 (31%), Gaps = 17/190 (8%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            ++ L   E   E  +++   N+   + N+   + L++ S   +Q   +    +S L   
Sbjct: 112 AEANLAAAEKGVETADLVNKRNQQLFDKNVSPKSQLEQASLSYDQAVSSRDAAVSALDQA 171

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +       + +   G +    +           P++  V       ++  V    I   K
Sbjct: 172 KNQVSYAELKADHNGIVTTINAD-VGQVVASGTPVVA-VAVDGEKEVQIAVPENDIAEFK 229

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G T    F     +        + ++     QQ         + V + +       N+ 
Sbjct: 230 PGKTVKASFWADDRL---VLDGKVREVSGSADQQSRT------FAVRVSL------PNDP 274

Query: 404 ELRNGFPAEV 413
           ++  G  A +
Sbjct: 275 QVLLGMTATI 284



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 4/86 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V+ G ++  G  L   +  +    +   + ++      ++T     D +N + 
Sbjct: 78  GKITERLVDIGDKVKPGDVLARMDSTDYQLAVKTAEANLAAAEKGVET----ADLVNKRN 133

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCS 150
             L     S + QL      Y    S
Sbjct: 134 QQLFDKNVSPKSQLEQASLSYDQAVS 159


>gi|292487171|ref|YP_003530041.1| putative multidrug efflux system inner membrane protein [Erwinia
           amylovora CFBP1430]
 gi|291552588|emb|CBA19633.1| putative multidrug efflux system inner membrane protein [Erwinia
           amylovora CFBP1430]
          Length = 421

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 60/165 (36%), Gaps = 4/165 (2%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  + + +++ G ++    V  + S  SG +     + G ++  G  L   +       +
Sbjct: 84  LADVPVYLTALGTVIPNATV-TVTSQVSGTLTHVYFKEGEKVAAGQLLAQIDPRSYQATL 142

Query: 97  DLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              + ++   +  + + +  L     L  +  +  +  E++   +  +LG   +  +++ 
Sbjct: 143 AQYQGNLSQNQALLKSAQLTLARYQKLYARDLLARQDLETQTATVGQYLGAVTADQAQIA 202

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              ++  +  +   ++    + L       +SS    ++   Q  
Sbjct: 203 AAKLNIEFARITAPISGRVGLRLVDAGNRIQSSDTTGIVVITQTQ 247



 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 24/170 (14%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ-------------RTFADEM 277
           +  + + +  L     L   A L  A Y K  +RDL   Q                  + 
Sbjct: 139 QATLAQYQGNLSQNQALLKSAQLTLARYQKLYARDLLARQDLETQTATVGQYLGAVTADQ 198

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVT 335
           +++   +   E   I +PI+G +   +   + N  Q S    ++ I   ++   +   V 
Sbjct: 199 AQIAAAKLNIEFARITAPISGRV-GLRLVDAGNRIQSSDTTGIVVIT-QTQPAAVTFSVP 256

Query: 336 PKQIQ----HVKKGYTATVRFPHYADI-REKKFKAIIEKIDPIISQQDNN 380
              I      +  G    +    +      +  +  ++ I   I     +
Sbjct: 257 QSNIPTLLKALHNGQP--LPATAFDQAGSTQLAQGEVQFISNQIDTSTGS 304


>gi|239937537|ref|NP_001155228.1| myosin heavy chain [Oryzias latipes]
 gi|239735374|dbj|BAH70477.1| myosin heavy chain embryonic type 1 [Oryzias latipes]
          Length = 1938

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 78/212 (36%), Gaps = 8/212 (3%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  E  + ++ K  S++  +  +  E   L     + + L  + + ++      L ++  
Sbjct: 1402 DAEECIEAVNAKCASLEKTKQRLQAEVEDLMIDVERANALAASLDKKQRNFDKVLAEWKQ 1461

Query: 148  --TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                S+    G     RSL  +L +M++ Y   LD   +   L+    + Q++++ +   
Sbjct: 1462 KYEESQAELEGAQKEARSLSTELFKMKNSYEEALD---QLETLKRENKNLQQEISDLTEQ 1518

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
              +   + ++L + ++ V     E++  + E +  L H         LE      EI R 
Sbjct: 1519 LGETGKTIHELEKGKKTVESEKSEIQTALEEAEATLEHEESKILRVQLELTQVKGEIDRK 1578

Query: 266  LEQNQRTFADEM---SKLTILEKTREQKTILS 294
            L +             ++    ++     + S
Sbjct: 1579 LAEKDEEIEQIKRNSQRVIESMQSSLDAEVRS 1610



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 80/217 (36%), Gaps = 15/217 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1209 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAIAKAKGNLEKMCRTLEDQLSELKSKN 1266

Query: 146  HSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDL 199
                 ++         + +    +  +L    ++        +  +  +  L    ++++
Sbjct: 1267 DENVRQLNDISGQKARLQTENGEIGRQLEEKEALVSQLTRGKQAFTQQIEELKRHIEEEV 1326

Query: 200  TMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHINELYD----EAN 252
                 L      +++D   L +Q     ++  EL+  + +  + +      Y+    +  
Sbjct: 1327 KAKNALAHAVQSARHDCDLLREQYEEEQEAKSELQRGMSKANSEVAQWRTKYETDAIQRT 1386

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E  +  K++++ L+  +       +K   LEKT+++
Sbjct: 1387 EELEDSKKKLAQRLQDAEECIEAVNAKCASLEKTKQR 1423



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 67/223 (30%), Gaps = 15/223 (6%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             G   L    ++  E+ +      +KK   +  +     E      +  +  + E     
Sbjct: 1059 EGDLKLAQESIMDLENDKQQSEEKIKKKDFETSQLLSKIEDEQSLGIQLQKKIKELQARI 1118

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             E +      +      +     +S     +  +L         ++++  K       L 
Sbjct: 1119 EELEEEIEAERAARAKVEKQRSDLSRELEEISERLEEAGGATAVQIEMNKKREAEFQKLR 1178

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               ++ T+                   +    S  EL E I   + + + + +   E  +
Sbjct: 1179 RDLEEATLQHEATA---------AALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEYKM 1229

Query: 254  EFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            E  +       + +   +LE+  RT  D++S+L        ++
Sbjct: 1230 EIDDLSSNMEAIAKAKGNLEKMCRTLEDQLSELKSKNDENVRQ 1272



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 69/222 (31%), Gaps = 10/222 (4%)

Query: 72   VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN----KYDVL 127
            V     +     +       T+ +   KK+    ++   + E +  +  N     K  + 
Sbjct: 1704 VAEQELVDASERVGLLHSQNTSLINTKKKLEADLVQIQGEVEDAVQEARNAEDKAKKAIT 1763

Query: 128  EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRLDLENKSS 186
            + A  + E +       +     K     +  +   L       M+        LE +  
Sbjct: 1764 DAAMMAEELKKEQDTSAHLERMKKNLEVTVKDLQHRLDEAENLAMKGGKKQLQKLEARVR 1823

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ----KNMLR 242
             L + + S Q+          K      +L  Q     K+   L++ + +     K   R
Sbjct: 1824 ELESEVESEQRRGADAIKGVRKYERRVKELTYQTEEDKKNVARLQDLVDKLQLKVKAYKR 1883

Query: 243  HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               E  ++AN     Y K +  +LE+ Q       S++  L 
Sbjct: 1884 QAEETEEQANTHLTRYRK-VQHELEEAQERADIAESQVNKLR 1924


>gi|206603957|gb|EDZ40437.1| putative secretion protein HlyD [Leptospirillum sp. Group II '5-way
           CG']
          Length = 299

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 54/174 (31%), Gaps = 18/174 (10%)

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A   +       +++  +   +S L+  +   E+  + S + GT+         +Y ++ 
Sbjct: 123 AEKAEAFRARALEDRALYQKALSDLSRAQLDLERSVVRSKVNGTVTNMHM-KPGDYVRRG 181

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           Q +  +V  S   Y+       +I  ++ G    +R               +E I   I 
Sbjct: 182 QGVFALV-DSDSYYVDGYFEETKIPAIRPGDRMEIRL----MGVSPPLWGTVETISRAIY 236

Query: 376 QQDNNLQTQEYYEV-----------ILKIT-DLAFSDNNIELRNGFPAEVLFTA 417
            Q+   +      V            + +   L      + L  G  A V+   
Sbjct: 237 DQERQDRPGTVPRVNPTFSWVRLAQRIPVRIRLEPVPPGVLLVAGQTATVIDRT 290



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 48/159 (30%), Gaps = 17/159 (10%)

Query: 20  MTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +T++ +  + G I W     +     +  V +   +    +V        G++ +  V +
Sbjct: 16  LTVVLLAIVAGYILWHIDRTAPWTR-DGRVRAD-WVSVAPDVE-------GLVSEVNVRD 66

Query: 75  GSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
              + +G  L   +               ++        D +    + L    +   +  
Sbjct: 67  NQVVRRGDVLFRIDPKRFRIALSSARAALLARYAAMRESDHDARRYERLLLSGNASAEKA 126

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           E+   + L+    Y    S +    +      ++ K+  
Sbjct: 127 EAFRARALEDRALYQKALSDLSRAQLDLERSVVRSKVNG 165


>gi|149002202|ref|ZP_01827144.1| BlpC ABC transporter [Streptococcus pneumoniae SP14-BS69]
 gi|147759517|gb|EDK66508.1| BlpC ABC transporter [Streptococcus pneumoniae SP14-BS69]
          Length = 239

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 10/215 (4%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + +NQ    +  S   L+       ++  + N L  +  +    +L+  S+     +   
Sbjct: 22  SQINQSIAGLESSIASLKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQL 81

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYI 330
            +   +L    +     T+ +P  G +  N  F   N       + +I P    ++   I
Sbjct: 82  TELKVQLDQATQRLGNNTLTAPSKGIVHLNSEFEGKNRIPTGTEIAQIFPVITDTREVLI 141

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V+   +  + KG T  ++     +         ++ ID   ++ +     +      
Sbjct: 142 TYYVSSDYLPLLDKGQTVRLKLEKIGNHGT-TIIGQLQTIDQTPTRTEQGNLFKLTALAK 200

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           L   D         ++ G    V       T    
Sbjct: 201 LSNEDSKL------IQYGLQGRVTSVTAKKTYFDY 229


>gi|119493294|ref|XP_001263837.1| cytoskeleton assembly control protein Sla2, putative [Neosartorya
           fischeri NRRL 181]
 gi|119411997|gb|EAW21940.1| cytoskeleton assembly control protein Sla2, putative [Neosartorya
           fischeri NRRL 181]
          Length = 1143

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 5/224 (2%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++ Q   L      +T   +   +    N R   + ++  L   + +   LE+    
Sbjct: 450 EQQRLAQEQLLREQYQTQTQGRLAELERENLNARAQYERDQLMLQQYDRRVKDLEEQMAQ 509

Query: 134 REEQLLDFLGKYHSTCSKVFNYGI---SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               L +          +     +    S Y +L    +++R  +L+ L       L  A
Sbjct: 510 LTTNL-NMQNASKDEQIRALQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTTKSLKLKAA 568

Query: 191 LL-SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               + ++   + + L  KN    + + +++R ++        N  E + + R +    +
Sbjct: 569 SAQEAIERREKLERELKTKNLELADMIRERDRALHDRDRLTGTNKEELEKLKRELRLAIE 628

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            A     +   EIS  L +  R  AD    L    +  E+ +  
Sbjct: 629 RAENAERSKGTEISTLLSKYNREMADLEESLRNKTRALEEISSR 672



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 77/210 (36%), Gaps = 7/210 (3%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           FE+ +       +    + LR    T+         + ++  +A   R++ +L    +  
Sbjct: 441 FEEQQRLQAEQQRLAQEQLLREQYQTQTQGRLAELERENLNARAQYERDQLMLQQYDRRV 500

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD----LTMM 202
               +      +++      K  ++R++        +K   L  L S  +++    L   
Sbjct: 501 KDLEEQMAQLTTNLNMQNASKDEQIRALQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTT 560

Query: 203 KNLFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           K+L  K A +Q  + +    ER +    LEL + I E+   L   + L      E     
Sbjct: 561 KSLKLKAASAQEAIERREKLERELKTKNLELADMIRERDRALHDRDRLTGTNKEELEKLK 620

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +E+   +E+ +     + ++++ L     +
Sbjct: 621 RELRLAIERAENAERSKGTEISTLLSKYNR 650


>gi|110638901|ref|YP_679110.1| acriflavin resistance protein B [Cytophaga hutchinsonii ATCC 33406]
 gi|110281582|gb|ABG59768.1| cation efflux system protein/acriflavin resistance protein B family
           [Cytophaga hutchinsonii ATCC 33406]
          Length = 371

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 6/170 (3%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYD-EANLEFANYLKEIS 263
            ++  V +    Q+  ++ K+   +L + I E    L  +N+LYD +  L       E+ 
Sbjct: 102 VDQVYVVKGQQVQKGALLAKTDGDQLMKGIQEVDKQLELLNQLYDKQKRLWDQQIGTEVQ 161

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
               +NQ+  A+  S+   L++   + +I +P +G I                P  ++V 
Sbjct: 162 YLNAKNQKEAAE--SRKATLQEQYSKTSIRAPFSGVIDEV-YTKEGQMLAPGMPAFRLVN 218

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              L  + A V+   +  VK    A V FP      + + K + + IDP 
Sbjct: 219 TGDLKLVAA-VSESYVSKVKVNQEAIVTFPDINKEIKTRVKVVGDVIDPT 267



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 9/129 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G+I ++ NV EI S   G + +  V  G Q+ +G  L   +  +    I      ++ L
Sbjct: 83  QGKIDSDKNV-EISSSVGGSVDQVYVVKGQQVQKGALLAKTDGDQLMKGIQEVDKQLELL 141

Query: 107 ------RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 +  +  ++   +         ++A ESR+  L +   K  ++    F+  I  V
Sbjct: 142 NQLYDKQKRLWDQQIGTEVQYLNAKNQKEAAESRKATLQEQYSK--TSIRAPFSGVIDEV 199

Query: 161 YRSLKMKLT 169
           Y      L 
Sbjct: 200 YTKEGQMLA 208


>gi|290996518|ref|XP_002680829.1| myosin [Naegleria gruberi]
 gi|284094451|gb|EFC48085.1| myosin [Naegleria gruberi]
          Length = 1891

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 72/201 (35%), Gaps = 2/201 (0%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +    +   +  ++ LR  +    +  +    +   ++   + + EQL +   ++     
Sbjct: 1377 QREQELKNLRDQLEQLRSQLSDNSNISEEAQKQIKKMKDDLKKQLEQLQESEQRFKDENQ 1436

Query: 151  KVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            K       I+     L +     + +      L +    +R  LSS+  +   +K+   +
Sbjct: 1437 KHKQTQQVIADRENQLNLSKDENQRLLREISQLRSDLENVRTNLSSNDSETLKLKSELRE 1496

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                  DL  ++        +L  ++ E K+     ++   +   E      + ++  + 
Sbjct: 1497 RDRKYKDLESEKDEFESQVDKLERDVLEWKSKADQKDQSISQIESENKQLQSDAAKAQQD 1556

Query: 269  NQRTFADEMSKLTILEKTREQ 289
              RT  D+  +++ +++  +Q
Sbjct: 1557 LDRTKQDKEREVSTMKQRLDQ 1577



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 80/215 (37%), Gaps = 20/215 (9%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FN 154
            +  ++   +++  +DT +  LD    ++D L K   + ++Q     G+      K     
Sbjct: 1039 NELELQSNSMKKQLDTFQQELDKKTREFDQLRKQKLTNDQQSEQLFGELEEEKRKRNDLE 1098

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK------ 208
                 + + L  +      I     DL N+   L+  ++S +  ++ +++L E+      
Sbjct: 1099 KKSRELAQQLDTERFDKERIESQSKDLSNEIDELKREIASLKLRISELEDLNERLKRENQ 1158

Query: 209  ---------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                        S+N+LN+ +  + +     ++ I      L    +  +E   +  +  
Sbjct: 1159 AYERDLSDLRLKSENELNKLQSELQREKQRTQDEISNLSQKLEDTRKRMEETESKLNSSD 1218

Query: 260  KEIS---RDLEQNQRTFADEMSKLTILEKTREQKT 291
            +++    +D  Q +   +D   K+  LE   +   
Sbjct: 1219 RDVRNLKKDKTQLEHDKSDLELKVKRLESEVKSSN 1253



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 87/229 (37%), Gaps = 21/229 (9%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE----KSALDFLNNKYDVLEKAFESREEQ 137
              L   +  + +    +    I  LR   D+E    K+ L+    +    E+  +  E +
Sbjct: 1573 QRLDQLQRGDGSSSSTVSSAEISRLRREYDSELIKLKAQLEDQVIQLADTEQKRKLTEFE 1632

Query: 138  LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            L DF  KY+          I SV  SL+ ++  +R +     DL+++ S ++   +    
Sbjct: 1633 LNDFRDKYNQEVKS--KKKIESVKLSLETEIEDLRDLAEKAEDLQDELSSVKQQHNEILS 1690

Query: 198  DLTM-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +L   +K    +   ++ + N+ +R V    ++L     ++    R +   Y++   +  
Sbjct: 1691 ELQSELKKERSERIYNEEEANRWKRDVQNLKVQLELANQKKDEESRRVRAQYEQELQDLQ 1750

Query: 257  NYLKEI--------------SRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +   ++                +L   QR+ +D     T+ E+  ++  
Sbjct: 1751 DLYNKLKNDKKKFSKSSNSLESELRDAQRSLSDSERYRTLAEQKADRLE 1799



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 72/206 (34%), Gaps = 19/206 (9%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D++ T     ++VS    R                   + +     + +L+    +    
Sbjct: 1556 DLDRTKQDKEREVSTMKQRLDQLQRGDGSSSSTVSSAEISRLRREYDSELIKLKAQLEDQ 1615

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              ++ +       +  + +L   R  Y   +  + K   ++  L +   ++  +++L EK
Sbjct: 1616 VIQLADTEQK--RKLTEFELNDFRDKYNQEVKSKKKIESVKLSLET---EIEDLRDLAEK 1670

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQK--------------NMLRHINELYDEANLE 254
                Q++L+  ++   +   EL+  + +++                ++++    + AN +
Sbjct: 1671 AEDLQDELSSVKQQHNEILSELQSELKKERSERIYNEEEANRWKRDVQNLKVQLELANQK 1730

Query: 255  FANYLKEISRDLEQNQRTFADEMSKL 280
                 + +    EQ  +   D  +KL
Sbjct: 1731 KDEESRRVRAQYEQELQDLQDLYNKL 1756


>gi|262372316|ref|ZP_06065595.1| RND family efflux transporter MFP subunit [Acinetobacter junii
           SH205]
 gi|262312341|gb|EEY93426.1| RND family efflux transporter MFP subunit [Acinetobacter junii
           SH205]
          Length = 396

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 18/193 (9%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +  + +     + I +L +   +  A    +        Q       +++   +    Q 
Sbjct: 136 QAVLADAITNNKRIQQLKNTGAIS-AQESTQYQTSQATAQARLDAAKAQIESNQLRLAQT 194

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            ++SP  G I   ++ +  + AQ  Q L +++        RA+VT   +  +++G TA V
Sbjct: 195 QVVSPDNGVI-SARTATVGSLAQTGQELFRLI-RDHRLEWRAEVTTTDLYKLQQGMTAHV 252

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
             P   D  + K    +  I P+I  Q        Y  V + +           +R G  
Sbjct: 253 ISP---DPSQPKVTGQVRMIAPVIDPQTR------YGLVYVDLPTTQ------AIRMGMF 297

Query: 411 AEVLFTAKNTTLA 423
            +  F     T  
Sbjct: 298 VKGEFDLGEKTAI 310



 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/163 (9%), Positives = 53/163 (32%), Gaps = 6/163 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
              +++G I     VV         + +  V  G ++ +G  L           +   K 
Sbjct: 71  QVFTANGNIAAWQEVVISSELSGQRLTRVNVNVGDEVKRGQILAEINSETIRADLAAAKA 130

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           S    +  +       D + N   + +               +     ++       +  
Sbjct: 131 SYAEAQAVL------ADAITNNKRIQQLKNTGAISAQESTQYQTSQATAQARLDAAKAQI 184

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            S +++L + + +  +   +  +++ + +L  + Q+   ++++
Sbjct: 185 ESNQLRLAQTQVVSPDNGVISARTATVGSLAQTGQELFRLIRD 227


>gi|262383438|ref|ZP_06076574.1| ABC transporter permease [Bacteroides sp. 2_1_33B]
 gi|262294336|gb|EEY82268.1| ABC transporter permease [Bacteroides sp. 2_1_33B]
          Length = 442

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 60/407 (14%), Positives = 119/407 (29%), Gaps = 107/407 (26%)

Query: 20  MTLLSIIGIIGLITWS------ILLPIEISVS-----SSGEILNEDNVVEIKSPFSGIIK 68
           + ++ I G+IG +  S      +   ++  V      +SG+++       I SP +  I 
Sbjct: 55  IAVVLIGGVIGFMQTSLQRKDLVFSTVDKGVIEVSVSASGKVVPAFE-EIINSPINSRIV 113

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +   + G  +  GTP+L  + +        +    +  R  +D  +              
Sbjct: 114 EIYKKGGDSVDVGTPILKLDLLSAETDYKKQLDEEQMKRLQLDQLR-------------- 159

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                            ++          + ++R++L  K   L
Sbjct: 160 --------------------------------IQNRNKLSEMEMQLKVSRMELNRKEVEL 187

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R             + L    A + + + Q E     S L+L+E+  + +N     +  Y
Sbjct: 188 RNE-----------RYLDSLGAGTTDKVRQVELDYNVSVLKLKEDEQKYENEKSLTDADY 236

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
               L+   + K     L + +RT  D                I SP    + Y      
Sbjct: 237 KVKELDLNIFRK----SLAETKRTLED--------------AQIRSPRKAILTYVN-NEV 277

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                Q   +  IV       I  ++       +  G  A V+          K   ++ 
Sbjct: 278 GAQVSQGSRVA-IVSDLSHFKIEGEIADTYGDRIAAGSKAVVKI------GNDKLDGVVS 330

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + P+                ++  T     DN+  LR+G   +V  
Sbjct: 331 DVTPLSKNG------------VISFTVQLEEDNHRRLRSGLKTDVYV 365


>gi|260556515|ref|ZP_05828733.1| membrane-fusion protein [Acinetobacter baumannii ATCC 19606]
 gi|260409774|gb|EEX03074.1| membrane-fusion protein [Acinetobacter baumannii ATCC 19606]
          Length = 373

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 70/197 (35%), Gaps = 8/197 (4%)

Query: 27  GIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
           G+I    W    P    +   G +  E   V + +     I++  V+ G +I +G PL+ 
Sbjct: 63  GLIIFGLWKSYQP--KPIELQGRVEAET--VHVSTKVPSRIEEIYVQEGQKISKGQPLVR 118

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
               E          ++++      T        N   D L   ++S + Q  +     +
Sbjct: 119 LVSPEIEAKKQQALATLQSALAFQSTVDRGSQQEN--IDTLYANWQSMKAQ-ANLAKTTY 175

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                ++  G+ S  R  +M   +  +  L+    + + +  +   +S QK     +   
Sbjct: 176 QRGENLYRQGVISRQRRDEMLAAQTSAQELSEAAYQ-QYARAKRGSTSQQKSTADAQVEI 234

Query: 207 EKNAVSQNDLNQQERIV 223
            K AVS+    + E  +
Sbjct: 235 AKAAVSEAQALEAETRL 251


>gi|156975111|ref|YP_001446018.1| hypothetical protein VIBHAR_02838 [Vibrio harveyi ATCC BAA-1116]
 gi|156526705|gb|ABU71791.1| hypothetical protein VIBHAR_02838 [Vibrio harveyi ATCC BAA-1116]
          Length = 378

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G I+   + V IKS   GI+ +  V+ G ++ QG  L+      T   +   
Sbjct: 42  IEKQAVAVGNIVPA-HSVSIKSQIDGIVGEMYVKVGEKVKQGQALIKVRPNPTPQALTDA 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
              +  +R   D E +     N +  V +    +  ++ +       S  + V     + 
Sbjct: 101 STDL--MRSEADLESAKQKLANLESLVKQDIIPNNYDEYVSARSAVKSAQANVLQKRQNL 158

Query: 159 SVYRSLKMKLTRMR-----------SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLF 206
            + RS +  +   R           ++   ++++ E   S   +  ++    L  M +L 
Sbjct: 159 ELIRSGEASIGDARLTSTIYAPIDGTVLNRKVEVGEPIISTESSQAATEMMSLADMNSLI 218

Query: 207 EKNAVSQNDLNQQ 219
            K +VS++D  Q 
Sbjct: 219 FKGSVSEHDAAQL 231



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 77/219 (35%), Gaps = 21/219 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +  DL + E  +  +  +L       K  +  I   YDE  +   + +K    ++ Q ++
Sbjct: 100 ASTDLMRSEADLESAKQKLANLESLVKQDI--IPNNYDEY-VSARSAVKSAQANVLQKRQ 156

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHS 325
                 S    +   R   TI +PI GT++  +              Q +  +M +    
Sbjct: 157 NLELIRSGEASIGDARLTSTIYAPIDGTVLNRKV-EVGEPIISTESSQAATEMMSLA-DM 214

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
                +  V+      +  G    +    Y D+   +   ++ K+  I S+  N+ +   
Sbjct: 215 NSLIFKGSVSEHDAAQLSPGMPVLLTVAPYPDM---EISGVLTKV-AIQSENLNSPEGNA 270

Query: 386 YYE-----VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +       +++ +L      I LR+GF +    T K 
Sbjct: 271 TAKSFDNGFEVEVGELKI-PKEILLRSGFSSTAQITLKK 308


>gi|319789729|ref|YP_004151362.1| efflux transporter, RND family, MFP subunit [Thermovibrio
           ammonificans HB-1]
 gi|317114231|gb|ADU96721.1| efflux transporter, RND family, MFP subunit [Thermovibrio
           ammonificans HB-1]
          Length = 389

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 70/222 (31%), Gaps = 31/222 (13%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           S      +      LK      + ++   L+++ +    +A      K     K L E +
Sbjct: 93  SSTIKPDVEKAKAGLKEIDAAFKELHKALLEVKARKKAAQAQYELALKTYNRFKKLLEAD 152

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           AVS+   ++ +     +   L+    ++                       +I   LE+ 
Sbjct: 153 AVSKQKFDEVKAQYEAAKANLQAVNAKEA----------------------QIKAKLEEL 190

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +       + L   E       + SP+ G ++        N      P+ K+   +    
Sbjct: 191 KAKKKQVEASLQKAEAYLSYTYLKSPVNGVVLQKLVD-KGNLVSPQTPVFKL--GTYPLE 247

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +RA V       +K G   TV+         + ++  + ++D
Sbjct: 248 VRAYVDNAYFGKIKVGTPVTVKVA------GETYRGKVVEVD 283



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 17/179 (9%), Positives = 52/179 (29%), Gaps = 17/179 (9%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG ++    +  +     G + + + + G ++ +G  L   +       ++  K  +K +
Sbjct: 52  SGTVIPSKEI-LLSPKVPGYLIEVKAKAGERVKKGQVLAVIDSSTIKPDVEKAKAGLKEI 110

Query: 107 --------------RCHIDTEKSALDFLNNKYDVLEKAFESRE--EQLLDFLGKYHSTCS 150
                         +      ++  +     Y+  +K  E+    +Q  D +   +    
Sbjct: 111 DAAFKELHKALLEVKARKKAAQAQYELALKTYNRFKKLLEADAVSKQKFDEVKAQYEAAK 170

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                  +   +                  L+   + L         +  +++ L +K 
Sbjct: 171 ANLQAVNAKEAQIKAKLEELKAKKKQVEASLQKAEAYLSYTYLKSPVNGVVLQKLVDKG 229


>gi|301309486|ref|ZP_07215428.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           20_3]
 gi|300832575|gb|EFK63203.1| efflux transporter, MFP component, RND family [Bacteroides sp.
           20_3]
          Length = 457

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 60/407 (14%), Positives = 119/407 (29%), Gaps = 107/407 (26%)

Query: 20  MTLLSIIGIIGLITWS------ILLPIEISVS-----SSGEILNEDNVVEIKSPFSGIIK 68
           + ++ I G+IG +  S      +   ++  V      +SG+++       I SP +  I 
Sbjct: 70  IAVVLIGGVIGFMQTSLQRKDLVFSTVDKGVIEVSVSASGKVVPAFE-EIINSPINSRIV 128

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +   + G  +  GTP+L  + +        +    +  R  +D  +              
Sbjct: 129 EIYKKGGDSVDVGTPILKLDLLSAETDYKKQLDEEQMKRLQLDQLR-------------- 174

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                            ++          + ++R++L  K   L
Sbjct: 175 --------------------------------IQNRNKLSEMEMQLKVSRMELNRKEVEL 202

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R             + L    A + + + Q E     S L+L+E+  + +N     +  Y
Sbjct: 203 RNE-----------RYLDSLGAGTTDKVRQVELDYNVSVLKLKEDEQKYENEKSLTDADY 251

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
               L+   + K     L + +RT  D                I SP    + Y      
Sbjct: 252 KVKELDLNIFRK----SLAETKRTLED--------------AQIRSPRKAILTYVN-NEV 292

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                Q   +  IV       I  ++       +  G  A V+          K   ++ 
Sbjct: 293 GAQVSQGSRVA-IVSDLSHFKIEGEIADTYGDRIAAGSKAVVKI------GNDKLDGVVS 345

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + P+                ++  T     DN+  LR+G   +V  
Sbjct: 346 DVTPLSKNG------------VISFTVQLEEDNHRRLRSGLKTDVYV 380


>gi|171912828|ref|ZP_02928298.1| Multidrug resistance protein [Verrucomicrobium spinosum DSM 4136]
          Length = 365

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 70/201 (34%), Gaps = 21/201 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++  L + E  + ++ L+      E        NE             +    D+   + 
Sbjct: 104 ARLSLQEAEATLAETKLKTEWQNRELAR-----NEPLARTKAISDADYQRFKVDVAAAEA 158

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             A  +++    +K  +   I +P  GT+   +   +  Y   S  ++ +V  ++   ++
Sbjct: 159 GLAAAVARRDQAQKALDDTQIRAPFDGTVAE-RLTEAGEYVSTSSQVVNLV-ATQTLRLQ 216

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             +    +  +++G       P       + F  +++ +   + +   +L          
Sbjct: 217 LYIPETAVGGIQQGQKVEFMVPA---RPGRNFTGVVKHVGASVRESARDL---------- 263

Query: 392 KITDLAFSDNNIELRNGFPAE 412
            I +   ++ + +L+ G  AE
Sbjct: 264 -IIEAEVANEDQQLKPGMFAE 283



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 52/157 (33%), Gaps = 4/157 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  VE G  + +G+ L+  +D      +   + ++   +  + TE    +   N+ 
Sbjct: 77  GKVVEAAVERGMAVKKGSVLIKLDDRSARLSLQEAEATLAETK--LKTEWQNRELARNEP 134

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               KA    + Q                        ++L    T++R+ +   +     
Sbjct: 135 LARTKAISDADYQRFKVDVAAAEAGLAAAVARRDQAQKALDD--TQIRAPFDGTVAERLT 192

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +      SS   +L   + L  +  + +  +   ++
Sbjct: 193 EAGEYVSTSSQVVNLVATQTLRLQLYIPETAVGGIQQ 229


>gi|121594701|ref|YP_986597.1| secretion protein HlyD family protein [Acidovorax sp. JS42]
 gi|222110695|ref|YP_002552959.1| secretion protein hlyd family protein [Acidovorax ebreus TPSY]
 gi|120606781|gb|ABM42521.1| secretion protein HlyD family protein [Acidovorax sp. JS42]
 gi|221730139|gb|ACM32959.1| secretion protein HlyD family protein [Acidovorax ebreus TPSY]
          Length = 356

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 87/289 (30%), Gaps = 18/289 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V+ G  +  G  L   +           + S       + + ++ +    +++
Sbjct: 57  GRVAEILVQEGDFVQAGQTLARMQVDSLLAQQREAEASRDRALQAVASARAQVALRESEH 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +     RE  L     +  +  S+      +S  + L     R+RS        + +
Sbjct: 117 TAAQALIAQREADLDA--AQRRAARSETLAREGASSEQELDDDRARVRSAQAALKATQAQ 174

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +    A + + +  +   ++  +    +   +N       +        +  +      +
Sbjct: 175 AQAAGAAIVAARTQVAGAESAVKAADATVQRINADLAD-SELAAPRDGRVQLRLAQPGEV 233

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                +           +S  L +         +++ I+     Q  I + ++  +    
Sbjct: 234 LGGGGKLLNLVDLTDVYMSFFLPETVAGRVALGTEVRIVLDAAPQYVIPAKVS-FVASTA 292

Query: 305 SFSSSNYAQQS--QPLMKIVPHSKLTYIRAKVTP----KQIQHVKKGYT 347
            F+       S  Q LM          +RA++ P    K I  VK G  
Sbjct: 293 QFTPKTVETASERQKLM--------FRVRARIAPELLRKHITQVKTGLP 333



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/290 (8%), Positives = 77/290 (26%), Gaps = 16/290 (5%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            + +           G +     +   L + R    +R       +  RA ++  + + T
Sbjct: 58  RVAEILVQEGDFVQAGQTLARMQVDSLLAQQREAEASRDRALQAVASARAQVALRESEHT 117

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM---------LRHINELYDEA 251
             + L  +    + DL+  +R   +S    RE    ++ +          +   +     
Sbjct: 118 AAQALIAQ---READLDAAQRRAARSETLAREGASSEQELDDDRARVRSAQAALKATQAQ 174

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                  +      +   +       + +  +        + +P  G +   +       
Sbjct: 175 AQAAGAAIVAARTQVAGAESAVKAADATVQRINADLADSELAAPRDGRVQ-LRLAQPGEV 233

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 L+ +V  +   Y+   +       V  G    +              + +    
Sbjct: 234 LGGGGKLLNLVDLTD-VYMSFFLPETVAGRVALGTEVRIVLDAAPQYVIPAKVSFVASTA 292

Query: 372 PIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               +  +  + + +  + V  +I       +  +++ G P +       
Sbjct: 293 QFTPKTVETASERQKLMFRVRARIAPELLRKHITQVKTGLPGQAWIKLDE 342


>gi|300771086|ref|ZP_07080962.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300761756|gb|EFK58576.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 352

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 16/148 (10%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
             + L+Q +     +++ L   +      T+ + I+GTI   +      Y      +  +
Sbjct: 137 TQQQLDQAKLKMESDLNNLKSAQLNASDATVRAGISGTINERKI-EPGTYVSPGTEMFSL 195

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V +     +R  V  K +  +K G    +    Y D   K F+  I  I P      N  
Sbjct: 196 V-NVGTLKLRVNVDEKNVVKLKVGQNIKITASVYPD---KSFEGKITFIAPKADGSLN-- 249

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGF 409
                + V +++     ++ N ELR G 
Sbjct: 250 -----FPVEIEV----KNNPNNELRAGM 268



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 32/103 (31%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V+ G  +  G  L T    +        + S    +   +  K+A        
Sbjct: 79  GRVKTVLVDEGDFVTAGQVLATVVGDKLNVNTQNAQASYNTSKADYERYKNAFQTGGVTQ 138

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             L++A    E  L +      +        GIS      K++
Sbjct: 139 QQLDQAKLKMESDLNNLKSAQLNASDATVRAGISGTINERKIE 181


>gi|225851076|ref|YP_002731310.1| putative efflux transporter, RND family, MFP subunit [Persephonella
           marina EX-H1]
 gi|225645647|gb|ACO03833.1| putative efflux transporter, RND family, MFP subunit [Persephonella
           marina EX-H1]
          Length = 388

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 50/141 (35%), Gaps = 6/141 (4%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +G +  E  V  + S  +G I K  V+ G  + +G  +   +  +  + I   K  ++ L
Sbjct: 58  TGSVFPEKTVK-LSSKITGNILKLNVKEGDTVKKGQTIAVIDTRQIEEDIKSLKKEVEYL 116

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESRE-----EQLLDFLGKYHSTCSKVFNYGISSVY 161
           R  I+  +  L      Y   +  +E        + + +   +            +  + 
Sbjct: 117 RDQIEINREKLKTAKANYKYTKNIYERDRILFENKAIPEEALELSHLKLVKAETDLKVIQ 176

Query: 162 RSLKMKLTRMRSIYLNRLDLE 182
           +S+     ++ S+      LE
Sbjct: 177 KSIDALNKKIESLLSKIKSLE 197



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 105/264 (39%), Gaps = 23/264 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
              +  L  K   LE   +     ++           +++     SV+    +KL+   +
Sbjct: 15  AGGIKILREKRKALENDIKPEPVSVILEGKAVKRGKLEIYRDFTGSVFPEKTVKLSSKIT 74

Query: 174 IYLNRLDLEN----KSSLLRALLSSHQKDLTMMKNLFEK--NAVSQNDLNQQERIVYKST 227
             + +L+++     K     A++ + Q +   +K+L ++      Q ++N+++    K+ 
Sbjct: 75  GNILKLNVKEGDTVKKGQTIAVIDTRQIE-EDIKSLKKEVEYLRDQIEINREKLKTAKAN 133

Query: 228 LELRENIHEQKNMLRHINELYDEANL-------EFANYLKEISRDLEQNQRTFADEMSKL 280
            +  +NI+E+  +L     + +EA         +    LK I + ++   +     +SK+
Sbjct: 134 YKYTKNIYERDRILFENKAIPEEALELSHLKLVKAETDLKVIQKSIDALNKKIESLLSKI 193

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI- 339
             LE   E  T+ SP+ G I     +   ++A   +P+++ V   +   +   + P  I 
Sbjct: 194 KSLEIFAEYGTVRSPVNGQIGRIFLY-EGSFAVAGKPVLE-VYTGRKILV--NIPP-DIY 248

Query: 340 QHVKKGYTATVRFPHYADIREKKF 363
             + +GY   +    +     K +
Sbjct: 249 NRIDEGYPVKI---AFNGRDIKGY 269


>gi|213162097|ref|ZP_03347807.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
          Length = 149

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 21/67 (31%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + I   V   G I  +DN   I     G I+   V  G  + +G  L    + +    
Sbjct: 25  YFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNFDLQKE 84

Query: 96  IDLKKVS 102
               +  
Sbjct: 85  YQRYRTQ 91


>gi|217971842|ref|YP_002356593.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS223]
 gi|217496977|gb|ACK45170.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS223]
          Length = 410

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 64/202 (31%), Gaps = 26/202 (12%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++  +   E+   K+  +L +           +  + D    E     K+   +L +N 
Sbjct: 116 VTKGQVIA-EQDNTKAKADLDKAKSTLALAKTKLERIEDLLIKEPFALAKQDVDELRENV 174

Query: 271 RTF-ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               AD   K   +        I +P  G +    S S  +       L+ +   +    
Sbjct: 175 NLADADFRQKQATMNDYL----IKAPFDGQLTSF-SQSIGSQIGAGTALVTLYSLNP--- 226

Query: 330 IRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
           +  +  ++       +KG    V    Y +   K FK ++  + P + +           
Sbjct: 227 VEVRYAISQNDFGKAQKGQKVNVTVEAYGN---KVFKGLVNYVAPAVDESSG-------- 275

Query: 388 EVILKITDLAFSDNNIELRNGF 409
              +++   A  +   +L  G 
Sbjct: 276 --RVEV-HAALDNPEFKLAPGM 294



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 44/114 (38%), Gaps = 18/114 (15%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--------- 117
           I      NG ++ +G  +   ++ +    +D  K ++   +  ++  +  L         
Sbjct: 105 ISAIHFSNGDKVTKGQVIAEQDNTKAKADLDKAKSTLALAKTKLERIEDLLIKEPFALAK 164

Query: 118 ---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
              D L    ++ +  F  ++  + D+L K        F+  ++S  +S+  ++
Sbjct: 165 QDVDELRENVNLADADFRQKQATMNDYLIKAP------FDGQLTSFSQSIGSQI 212


>gi|42558933|sp|Q8HZ57|CCHCR_PANPA RecName: Full=Coiled-coil alpha-helical rod protein 1; AltName:
           Full=Alpha-helical coiled-coil rod protein
 gi|23296172|gb|AAN12282.1| HCR [Pan paniscus]
          Length = 782

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 79/205 (38%), Gaps = 5/205 (2%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             + L+   ++  R  +D E      L  +     +     E Q L  + +      +  
Sbjct: 499 ADVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLERELQQT 558

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAV 211
              ++S+   L++     +        L  + +  + L   +  +K   +   L E+ + 
Sbjct: 559 QESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSD 618

Query: 212 SQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           ++  LN+  R   K+ + LR+      ++K   + +  L +EA  E    L    ++LE+
Sbjct: 619 TERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELER 678

Query: 269 NQRTFADEMSKLTILEKTREQKTIL 293
           ++      + +  +L + ++Q+ + 
Sbjct: 679 DKNLMLATLQQEGLLSRYKQQRLLT 703



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 62/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E +   L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 85  QALSQQAEVIARQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEA- 143

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+   SQ +L + +R+  +    L +   E  + L    E  
Sbjct: 144 -EGLRAALAGAEVVRKNLEEG--SQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGL 200

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 201 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 243


>gi|85716892|ref|ZP_01047857.1| efflux transporter, RND family, MFP subunit [Nitrobacter sp.
           Nb-311A]
 gi|85696272|gb|EAQ34165.1| efflux transporter, RND family, MFP subunit [Nitrobacter sp.
           Nb-311A]
          Length = 385

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 75/219 (34%), Gaps = 22/219 (10%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +       E  + + +A  +    ++ + K+             +QE    K TL  R+
Sbjct: 81  QVLARLSTSEQDAKVAKARAALLIAEVNITKSAANVEKARAVFTQKQETNRRKQTLAGRD 140

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + +Q       +E   +A++  A        ++E  +    D  ++L   E     +T+
Sbjct: 141 VVSQQAAEEAVRDEAVAKADVTVAE------SEVESAKAQLTDAHAQLQYEETMLRHRTL 194

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK----LTYIRAKVTPKQIQHVKKGYTA 348
           ++P    ++  +     +  + S P+  +V             A+        +++G   
Sbjct: 195 VAPFDAVVIE-RHKELGSVIKASDPIFTLVAVGSYWGLAYVDEARA-----GFIEEGQPV 248

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
            VR       R +  ++   ++  +  + D   + +  Y
Sbjct: 249 EVRL------RSRPLESFNGRVVRVGLESDRVTEERRVY 281



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 15/132 (11%), Positives = 42/132 (31%), Gaps = 2/132 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
              + +   ++G ++ +G  L      E    +   + ++  L   ++  KSA +    +
Sbjct: 63  GATLTELHADHGDRVSKGQVLARLSTSEQDAKVAKARAAL--LIAEVNITKSAANVEKAR 120

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +K   +R +Q L          ++      +     + +  + + S      D   
Sbjct: 121 AVFTQKQETNRRKQTLAGRDVVSQQAAEEAVRDEAVAKADVTVAESEVESAKAQLTDAHA 180

Query: 184 KSSLLRALLSSH 195
           +      +L   
Sbjct: 181 QLQYEETMLRHR 192


>gi|146281233|ref|YP_001171386.1| exonuclease SbcC [Pseudomonas stutzeri A1501]
 gi|145569438|gb|ABP78544.1| exonuclease SbcC [Pseudomonas stutzeri A1501]
          Length = 1217

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 74/236 (31%), Gaps = 24/236 (10%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLR----CHIDTEKSALDFLN-NKYDVLEKAFES 133
            +GT L    D      +                 ++ +   L  L   + +VLE   ++
Sbjct: 184 ERGTLLEKLTDTGLYSRLGQAAFEAAKEAKEGLARLEQQAGGLQPLEPEQREVLENEHQA 243

Query: 134 REEQLLDFLGKYHSTCSK-VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           + ++L     +  +  ++  +   +  +    +    +++     R +L     +L    
Sbjct: 244 QLDELKALQQQLKALEAQRQWLSELQRLENEREAACQQLQDAEDERENLAEARRILDLFE 303

Query: 193 SSHQKDLTMMK-----NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
               +    ++      L EK A S   L  +E+ V +   EL+         LR   + 
Sbjct: 304 QLAPQRHRFLRLQDLGPLLEKAADSLARLQHEEQAVQQRLAELQSQCSAASEQLRSAEQA 363

Query: 248 YDEANLEFANYLKE-------------ISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +A        +E             I  +  Q     +   + L  LE+ +++ 
Sbjct: 364 RQDAEPRLVQARREEERLQHLNADLAAIREESVQADAAASAGEATLKQLEQQQQRT 419


>gi|116255436|ref|YP_771269.1| putative HlyD family protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115260084|emb|CAK03183.1| putative HlyD family protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 326

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 78/227 (34%), Gaps = 12/227 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             L+ M  ++++  +G++ W    P  + V          N V+I    SG I K  V+ 
Sbjct: 5   RILRPMIAMAVLAALGILLWFATRPPPLIVQGE----VSANRVDISPRVSGRIAKLNVDV 60

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G+ +   E  E T  + + + ++   +  +    S       + + ++ A    
Sbjct: 61  GDNVEAGSVIAALESPELTAALHMSQAALSVSQADLARVNS------TRPETIDAANAEL 114

Query: 135 EEQLLDF-LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
              + D  L +  S          +S           + +    R   E    L  A  S
Sbjct: 115 AAPVADVTLYQEESARQARLITTGASTQAQADQAARNLEAAIRKRESAEANVRLAVAGSS 174

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK-STLELRENIHEQKN 239
             +K L   +    + ++ Q  +N  E  ++   + ++   + E   
Sbjct: 175 KEEKALAAAQVEQTRASLDQQQVNVSELTIHAPISGQVTTRVAELGE 221


>gi|315123381|ref|YP_004065387.1| putative lipoprotein component of a efflux transporter
           [Pseudoalteromonas sp. SM9913]
 gi|315017141|gb|ADT70478.1| putative lipoprotein component of a efflux transporter
           [Pseudoalteromonas sp. SM9913]
          Length = 389

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 45/113 (39%), Gaps = 3/113 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFL 120
           SGII++ + + G  + QG  L   +D      +D     +K+ +  ++    E S    L
Sbjct: 70  SGIIEQIEFKEGDSVKQGDVLFRLDDRSFAATVDSLSAQVKSAQAALEQAKSEASRAVRL 129

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
             +  +  +  ++R   L     +  +  +++    +   + S+   +  + S
Sbjct: 130 TERKAISTEQAQARTSTLRQREAQLAALQAQLKAAKLDLEFTSVVSPIDGVIS 182


>gi|303228751|ref|ZP_07315570.1| efflux transporter, RND family, MFP subunit [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303230684|ref|ZP_07317434.1| efflux transporter, RND family, MFP subunit [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302514739|gb|EFL56731.1| efflux transporter, RND family, MFP subunit [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302516590|gb|EFL58513.1| efflux transporter, RND family, MFP subunit [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 354

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 67/215 (31%), Gaps = 18/215 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--EISRDL 266
             ++Q +       V  +   +            +          +  + L+  +    L
Sbjct: 86  QVIAQINGADTASQVQNAQGAVTAAQSAYDLASTNAERYRALYAEQAISKLQLDQAENQL 145

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
              +       + L +        T+++P +G I       +       Q +  +    +
Sbjct: 146 NAAKAQLQQAQASLNLSNNQNSYTTLVAPDSGIITALNV-EAGQVVAAGQAIGTLAAGHE 204

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A +  +++  +  G TAT+ F    D++    + I+ +I P+             
Sbjct: 205 PEAVIA-LPEQEMSKIHPGSTATITFWALPDVK---VQGIVREISPVPDPVART------ 254

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           Y V + + +       ++L  G     +    +TT
Sbjct: 255 YTVKITLQNP---PKEVQL--GMTINAILNQTDTT 284


>gi|300311362|ref|YP_003775454.1| HlyD family secretion, possible efflux component [Herbaspirillum
           seropedicae SmR1]
 gi|300074147|gb|ADJ63546.1| HlyD family secretion, possible efflux component, protein
           [Herbaspirillum seropedicae SmR1]
          Length = 407

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 62/155 (40%), Gaps = 11/155 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  I+  V +SG +     V  + +  SG IK  +V  G Q+ +G  +   + +   +
Sbjct: 45  ARVADIQDVVLASGTVKAYKQV-SVGAQVSGQIKSLKVALGDQVKKGQLVAEIDSLTQAN 103

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL----------EKAFESREEQLLDFLGK 144
            +   + S++NL+  +  ++++L      Y              + FES E  L      
Sbjct: 104 ALASAEFSLQNLQAQLRAKEASLKQAQLAYARQKMMLAGDASSRENFESAEATLNTTQAD 163

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
             +  +++ +  I      L +  TR+ S    ++
Sbjct: 164 IAALQAQIKDGAIKVDTARLNLGYTRISSPIEGQV 198



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 72/251 (28%), Gaps = 7/251 (2%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           ++ +  LR       + L  L   + +            L    +       V   G   
Sbjct: 2   RMKLAQLRRPKFIFLALLVLLIAAWIIRSVLTPPAPPTYLSATARVADIQDVVLASGTVK 61

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            Y+ + +       I   ++ L ++    +  L +    LT    L      S  +L  Q
Sbjct: 62  AYKQVSVGAQVSGQIKSLKVALGDQVK--KGQLVAEIDSLTQANALASAEF-SLQNLQAQ 118

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            R    S  + +     QK ML   +    E        L     D+   Q    D   K
Sbjct: 119 LRAKEASLKQAQLAYARQKMMLAG-DASSRENFESAEATLNTTQADIAALQAQIKDGAIK 177

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPHSKLTYIRAKVTPK 337
           +           I SPI G +V             +Q    I  V       I+A+++  
Sbjct: 178 VDTARLNLGYTRISSPIEGQVVAI-VAQEGQTVNANQSTPTIIKVARMDTVTIKAQISEA 236

Query: 338 QIQHVKKGYTA 348
            +  VK G   
Sbjct: 237 DVVRVKPGQPV 247


>gi|294339735|emb|CAZ88097.1| putative Secretion protein HlyD [Thiomonas sp. 3As]
          Length = 382

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 40/123 (32%), Gaps = 12/123 (9%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V  G ++  G  L   + ++  + I  ++ ++ + +  +   ++  DF   + 
Sbjct: 73  GRVKSLDVHVGDRVRAGQVLGEMDPVDLDERIRSQRAALLSTQAQLRQAQTQRDFARTQA 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               +   +            H T  ++       +  +         ++   R DL   
Sbjct: 133 TRYAQLLAA------------HGTTEELLATRQQELQSAEAALQAAQDAVERARADLAAL 180

Query: 185 SSL 187
            + 
Sbjct: 181 QAQ 183



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 48/164 (29%), Gaps = 5/164 (3%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q +    ++  +       +   L   +   +E        L+     L+  Q       
Sbjct: 115 QAQLRQAQTQRDFARTQATRYAQLLAAHGTTEELLATRQQELQSAEAALQAAQDAVERAR 174

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + L  L+  R    ++SP AG +   +     +      P+++++      +I  +    
Sbjct: 175 ADLAALQAQRSNLKLVSPTAGLVTA-RDADPGSTVVAGAPVVELI-APDSLWIDTRFDQL 232

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
               +     A +          +     + ++DP+        
Sbjct: 233 TATGLAADLPARIVL---RSRSNQTLAGRVLRVDPVADAVTEET 273


>gi|206577465|ref|YP_002236039.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|288933046|ref|YP_003437105.1| secretion protein HlyD [Klebsiella variicola At-22]
 gi|330002421|ref|ZP_08304316.1| auxiliary transport protein, membrane fusion protein family protein
           [Klebsiella sp. MS 92-3]
 gi|206566523|gb|ACI08299.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|288887775|gb|ADC56093.1| secretion protein HlyD family protein [Klebsiella variicola At-22]
 gi|328537306|gb|EGF63561.1| auxiliary transport protein, membrane fusion protein family protein
           [Klebsiella sp. MS 92-3]
          Length = 378

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 69/224 (30%), Gaps = 23/224 (10%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   +  +   L   L  + ++     + +  ++ + A      KD              
Sbjct: 99  YQARVDRLQADLVTALHSINTLKAQLSEAQANTTRVSAERDRLYKDYQRY---------- 148

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
                  +    +       +I   +      + L   +  E A    ++   +   Q  
Sbjct: 149 ------LKGSQARVNPFSESDIDNARQNYLAQDALVKASVAEQAQIQSQLDSMINGEQSQ 202

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYI 330
            A   ++L   +   +Q T+ +P  G I          YA     +P+M  +P  K   +
Sbjct: 203 VASLRAQLAEAKYNLDQTTVRAPSDGYITQVLIR-PGTYAASLPLRPVMVFIPEQKRLIV 261

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            A+     +  ++KG  A   F        + F   +  I P++
Sbjct: 262 -AQFRQNSLLRLEKGDDAEAVFNALP---GQVFHGKLVSILPVV 301



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 55/155 (35%), Gaps = 11/155 (7%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV-------SIKNLRCHID 111
           I    +G++     +   ++ +G  L T +       +D  +        SI  L+  + 
Sbjct: 66  ITPQVTGVVNSVTDKANQRVKKGEVLFTIDPARYQARVDRLQADLVTALHSINTLKAQLS 125

Query: 112 TEKSALDFLNNKYDVL----EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++    ++ + D L    ++  +  + ++  F         + +    + V  S+  +
Sbjct: 126 EAQANTTRVSAERDRLYKDYQRYLKGSQARVNPFSESDIDNARQNYLAQDALVKASVAEQ 185

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                 +       +++ + LRA L+  + +L   
Sbjct: 186 AQIQSQLDSMINGEQSQVASLRAQLAEAKYNLDQT 220


>gi|87116412|dbj|BAE79362.1| myosin heavy chain embryonic type 2 [Cyprinus carpio]
          Length = 1935

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 79/199 (39%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N+    L+K   + ++ L ++  KY    +++   G  
Sbjct: 1414 LEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYEEGQAEL--EGAQ 1471

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   L+    + Q++++ +     +   S ++L +
Sbjct: 1472 KEARSLSTELFKMKNSYEESLD---QLETLKRENKNLQQEISDLTEQLGETGKSIHELEK 1528

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      E+ R L +          
Sbjct: 1529 AKKAVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQIKR 1588

Query: 278  --SKLTILEKTREQKTILS 294
               ++T   ++     + S
Sbjct: 1589 NSQRVTESMQSTLDSEVRS 1607



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/229 (11%), Positives = 77/229 (33%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1206 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKN 1263

Query: 146  HSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDL 199
                 ++         + +       +L     +        +  +  +  L    ++++
Sbjct: 1264 DENLRQINDLSAQRARLQTENGEFGRQLEEKEGLVSQLTRGKQAFTQQIEELKRQIEEEV 1323

Query: 200  TMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                 L      +++D   L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1324 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1383

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1384 EELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLMI 1430



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 74/226 (32%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + +  K      L   I+ E+S    L  K   L+   
Sbjct: 1056 EGDLKLAQESIMDLENDKQQSDEKLKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1115

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1116 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1169

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1170 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1224

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +       + +   +LE+  RT  D++S++        ++ 
Sbjct: 1225 KMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKNDENLRQI 1270


>gi|281346587|gb|EFB22171.1| hypothetical protein PANDA_015002 [Ailuropoda melanoleuca]
          Length = 1112

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 76/235 (32%), Gaps = 17/235 (7%)

Query: 72  VENG-----SQILQGTPLLTFEDI----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           V +G       +  G   L  +D     E  +L++ +   +   R  + T  + +  L  
Sbjct: 202 VRDGVAEEEGTVELGPKRLWKDDTGRVEELQELLEKQNFELSQARERLVTLTATVAELEE 261

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLKMKLTRMRSIYLNRLD 180
                 +     EE             ++       I+++ +          SI+     
Sbjct: 262 DLGTARRDLIKSEELSSKHQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDK 321

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH----- 235
           LEN+ +   +L    ++    ++ L E          ++   + +   EL + I      
Sbjct: 322 LENELANKESLHRQCEEKARHLQELLEVAERKLQQTMRKAETLPEVEAELAQRIAALTKA 381

Query: 236 -EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            + +  L       +E +     +L+++   LE+  +  A    +  + E   ++
Sbjct: 382 RDLRAALTRACLQAEERHGSIEEHLRQLEGQLEEKNQELARVRQREKMNEDHNKR 436


>gi|222055569|ref|YP_002537931.1| efflux transporter, RND family, MFP subunit [Geobacter sp. FRC-32]
 gi|221564858|gb|ACM20830.1| efflux transporter, RND family, MFP subunit [Geobacter sp. FRC-32]
          Length = 441

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 107/314 (34%), Gaps = 41/314 (13%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L+    +EK + D       V   + +     +           ++    G  S      
Sbjct: 85  LKEGAASEKKSADSGQTPPGVTLSSQQQILANVATAQVAQREFSTETVAAGRVSWDERRL 144

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
            +++      + RLD+    + +RA            + L +   +   DL   ++    
Sbjct: 145 NRVSSRVQGRVERLDVNFTGARVRAG-----------EPLLD---IYSPDLISAQKEY-- 188

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             L +      +++ L     +           L++ SR   +       ++++L    +
Sbjct: 189 -LLAIDGAERAKESPLPESRSMM--------EGLRDASRSRLKVWGVSDQQIAELERSRQ 239

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
            ++  +I SP+ G +   +  ++  Y  +  PL  +   S +    A++    +  ++ G
Sbjct: 240 PKKVVSIKSPVTGVVTE-RLVTTGQYVNEGSPLFSVGSLSGVWIF-AELYENDLGRIETG 297

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
             A V    +     K F+  +  +DP+++ +   L      +V + + + A       L
Sbjct: 298 TPALVTTEAFP---GKVFQGRVAFVDPVVNPETRTL------KVRVDLDNRAGL-----L 343

Query: 406 RNGFPAEVLFTAKN 419
           +     +V+   + 
Sbjct: 344 KPEMFVKVILKGRK 357


>gi|15606100|ref|NP_213477.1| acriflavin resistance protein AcrE [Aquifex aeolicus VF5]
 gi|2983278|gb|AAC06871.1| acriflavin resistance protein AcrE [Aquifex aeolicus VF5]
          Length = 374

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 54/162 (33%), Gaps = 12/162 (7%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   +  EI +   G +   +V+ G  + +G  L   +  +    I++ K  I   + + 
Sbjct: 64  IVAGDRAEISTRVMGYVVDVKVKEGDFVKKGQTLFVIDPRDVKAQINIMKQRIAQAQKNY 123

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +  K+  + +   Y+  +K              K  +     F+   +    +       
Sbjct: 124 EAAKAHYEAVKKTYERFKKLL------------KEGAITQHEFDQVEAQYLAAKAKLQAA 171

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
              I + R    +  + L         D  +++ + ++  ++
Sbjct: 172 KAEIRVAREAYNSAKAQLSYAEVKAPFDGYVIQKMVDRGDIA 213



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 26/227 (11%), Positives = 64/227 (28%), Gaps = 49/227 (21%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            ++  +       +      +A   + +K     K L ++ A++Q++ +Q E     +  
Sbjct: 107 AQINIMKQRIAQAQKNYEAAKAHYEAVKKTYERFKKLLKEGAITQHEFDQVEAQYLAAKA 166

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +L+    E +                                             +    
Sbjct: 167 KLQAAKAEIRVA------------------------------------REAYNSAKAQLS 190

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              + +P  G ++        + A    PL  +   ++   +      K    +  G T 
Sbjct: 191 YAEVKAPFDGYVIQKMVD-RGDIANPGMPLAVL--ETRPYKVEVSFPEKYFGEINIGDTL 247

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            V    Y +   + F A + +++P +            ++V   I D
Sbjct: 248 EV----YVEKLGRVFPAKVVEVEPAVDPVSRT------FKVKALIDD 284


>gi|307609239|emb|CBW98704.1| hypothetical protein LPW_05121 [Legionella pneumophila 130b]
          Length = 345

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 73/205 (35%), Gaps = 6/205 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              +  TL ++I  IG +T +I+      +  +      +NV  + +  SG I +  V+N
Sbjct: 19  KPKRWFTLTNVIIFIGFLT-AIIYVFSYLIPFTDNAFVVNNVRPVAALTSGYITELYVKN 77

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L T         ++     +   +  +   K+  +      +  +K ++  
Sbjct: 78  GDAVRKGQKLFTVFKKPYEYTVEQLNADLAGAQAKLAVLKATYERDLKLSENEQKIYKKL 137

Query: 135 EEQLLDFLGKYHSTCSKVF-----NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            +    +L  Y      +           +     +  L ++          EN+   ++
Sbjct: 138 AQDDQKYLKGYAIKSVSLITLQNSQQETKAAKDKWQASLKQLEIDQHQITVQENEIKSIQ 197

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQN 214
           A L + + +L +     + N V QN
Sbjct: 198 ARLKNAKVNLDLTDVYAQGNGVIQN 222



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 59/180 (32%), Gaps = 10/180 (5%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +  +  +    + K ++L+A      K     + +++K A       +   I   S + L
Sbjct: 99  VEQLNADLAGAQAKLAVLKATYERDLKLSENEQKIYKKLAQDDQKYLKGYAIKSVSLITL 158

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           + +  E K           +  ++           +   +       ++L   +   +  
Sbjct: 159 QNSQQETKAAKDKWQASLKQLEID--------QHQITVQENEIKSIQARLKNAKVNLDLT 210

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +   G I     F+       +QPL  +V      YI+A      ++ V+KG    +
Sbjct: 211 DVYAQGNGVIQNL-FFTIGTPVNINQPLFSLV-DQDNIYIQANFNETDLRDVRKGSKVLI 268


>gi|301776200|ref|XP_002923518.1| PREDICTED: LOW QUALITY PROTEIN: huntingtin-interacting protein
           1-like [Ailuropoda melanoleuca]
          Length = 1042

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 73/204 (35%), Gaps = 12/204 (5%)

Query: 91  ETTDLIDLKKVSIKNLRC-HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +  D  +  +  +  L+    DTEK+       + +   +A E R  +L +   +     
Sbjct: 431 QAADDSEFLRAELDELKKKREDTEKAQRSL--TEIERRAQANEQRYSKLKEKYSELVQNH 488

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH-QKDLTMMKNLFEK 208
           + +     + V + + +       +   + +LE+    +        Q+ + ++++L ++
Sbjct: 489 ADLLRKN-AEVTKQVSVARQAQADLEREKKELEDSFQRISDQAQRKTQEQMEVLESLKQE 547

Query: 209 NAVSQNDLNQQERIV---YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            A S+ +L   +  +    +S  +    I E +    ++         E    L  +   
Sbjct: 548 LATSKQELQIVQGSLETSAQSEAKWAAQIAELEKERSNLAHAVARGEEE----LSALQEQ 603

Query: 266 LEQNQRTFADEMSKLTILEKTREQ 289
           LE  QR  +        L K + +
Sbjct: 604 LEHTQRELSSAKESACQLAKDQRR 627


>gi|325143891|gb|EGC66203.1| macrolide-specific efflux protein MacA [Neisseria meningitidis
           M01-240013]
          Length = 388

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 39  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 97

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 98  KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELK 157

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 158 ALIRQSKISINTAES 172



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 79/262 (30%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 56  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 107

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        +    E      + L     ++ + +         +
Sbjct: 108 LVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELKALIRQSKISI 167

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 168 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 226

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 227 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 283

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 284 SFVP-----NPDGKLATGMTTQ 300


>gi|315497885|ref|YP_004086689.1| secretion protein hlyd family protein [Asticcacaulis excentricus CB
           48]
 gi|315415897|gb|ADU12538.1| secretion protein HlyD family protein [Asticcacaulis excentricus CB
           48]
          Length = 339

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 44/120 (36%), Gaps = 2/120 (1%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +  ++G+   E  V+EI +  +G++ +  V+ G  + +G  L   E       +   + +
Sbjct: 59  AAIANGKADVEGGVIEIAARRAGVVHEVLVQEGDDVKKGQVLARQEADTAQLAVQRARAN 118

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTCSKVFNYGISSV 160
           +   +  +   +  LD    +Y   +K   +     Q LD                 +SV
Sbjct: 119 VVEAQASMRLTEVNLDTAKREYARYQKLAATNFVAGQKLDAQADLIREAEARLAAQQASV 178



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQK----NMLRHINELYDEANLEFANYLKEISRD 265
           AV +   N  E        E+  +  +++      L   N +  +     A+ ++E    
Sbjct: 111 AVQRARANVVEAQASMRLTEVNLDTAKREYARYQKLAATNFVAGQKLDAQADLIREAEAR 170

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIV 322
           L   Q +     + L       EQ  + +P+ G I   + F++      +     + ++V
Sbjct: 171 LAAQQASVQTAQAALAQANFDLEQTYVRAPMDGRI--IRRFANPGSGTSTLNVSTMFQLV 228

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP------IISQ 376
           P +    +R+++    I  VK G    +  P       K +   ++++        ++S 
Sbjct: 229 PAAAERIVRSEIVESSIPDVKPGQEVEI-IPETDQ--TKVYVGTVKRMAATFGSRKLLSD 285

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELR 406
             N    +   EV++   +         L 
Sbjct: 286 SGNEASDERVVEVVVTADNAPLLIGQRVLV 315


>gi|289824667|ref|ZP_06544194.1| putative type-I secretion protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
          Length = 149

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 21/67 (31%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
             + I   V   G I  +DN   I     G I+   V  G  + +G  L    + +    
Sbjct: 25  YFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNFDLQKE 84

Query: 96  IDLKKVS 102
               +  
Sbjct: 85  YQRYRTQ 91


>gi|123440822|ref|YP_001004813.1| multidrug efflux protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087783|emb|CAL10569.1| multidrug efflux protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 386

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 88/263 (33%), Gaps = 15/263 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GIIKK     G+++  G  L   +        D  K +++N++  + + K        +Y
Sbjct: 66  GIIKKRLFTEGAEVSAGQVLYQIDPASYQAAYDTAKAALQNVQVSVKSAK----LKAQRY 121

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L K     ++   D    Y    + V     +     + +  T++R+    R+ + + 
Sbjct: 122 AALAKENGVSQQDADDAQTSYQQALANVAEKTAALETARINLAYTQVRAPISGRIGISSV 181

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +    AL++++Q          +   V     + Q   + K      E +      L   
Sbjct: 182 TPG--ALVTANQTTALATIRNLDPIYVDLTQSSAQLLALRKQQQAGNETVVNAPVQLTLE 239

Query: 245 NELY--DEANLEFANYLKEISRDLEQNQRTFADEMSKL-------TILEKTREQKTILSP 295
           +      E +L+ A    + +      +  F +   +L         +  +     IL+P
Sbjct: 240 DGSVYAHEGSLQLAEVAVDEATGAVTLRAEFPNPEHQLLPGMFVRASVRNSVNNAAILAP 299

Query: 296 IAGTIVYNQSFSSSNYAQQSQPL 318
             G     +  + +    Q Q +
Sbjct: 300 QQGITHDAKGHAIALVVNQQQQV 322


>gi|305665217|ref|YP_003861504.1| putative transport/efflux component protein [Maribacter sp.
           HTCC2170]
 gi|88709970|gb|EAR02202.1| putative transport/efflux component protein [Maribacter sp.
           HTCC2170]
          Length = 386

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 75/193 (38%), Gaps = 9/193 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            +  IE    ++G+++ ED + EIK   SGII+K  +E G  +  G  +   + +     
Sbjct: 41  FISNIEKKTVATGKVIPEDEI-EIKPQISGIIEKIFMEEGEMVKAGDLIARIKVVPNEQS 99

Query: 96  IDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           ++  +  +KN    +     E +    L +K  +  + F S + Q      +  +  S  
Sbjct: 100 LNQSRGRVKNAELALNNVKIEFNRNKALFDKGVISSQDFNSLQLQYNQAQQELSNARSDY 159

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDL--ENKSSLLRALLSSHQKDLTMMKNLFE--- 207
                 S   S         ++    L++  E    ++++   +    +  + +L +   
Sbjct: 160 QIIRRGSAGGSATANTNIRATVNGTILEIPVEEGDQVIQSNNFNDGTTIASIADLTKMIF 219

Query: 208 KNAVSQNDLNQQE 220
           +  V + ++ + +
Sbjct: 220 EGKVDEGEVGKLQ 232



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 81/295 (27%), Gaps = 55/295 (18%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            E  ++   +      K+F      V     +   ++     +      +       L++
Sbjct: 57  PEDEIEIKPQISGIIEKIFMEEGEMVKAGDLIARIKVVPNEQSLNQSRGRVKNAELALNN 116

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            + +    K LF+K  +S  D N  +                           Y++A  E
Sbjct: 117 VKIEFNRNKALFDKGVISSQDFNSLQLQ-------------------------YNQAQQE 151

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            +N   +               + + +          I + + GTI+           Q 
Sbjct: 152 LSNARSDYQ------------IIRRGSAGGSATANTNIRATVNGTILEIPVEEGDQVIQS 199

Query: 315 -----SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                   +  I           KV   ++  ++ G    +       +  K+  A +  
Sbjct: 200 NNFNDGTTIASIA-DLTKMIFEGKVDEGEVGKLQVGTALKISLGA---VEGKELDAKLRF 255

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLA 423
           I P   ++           V  KI       +++ +R G+ A   +   K  ++ 
Sbjct: 256 IAPKGVEETGA--------VQFKIEGDVEVSDDVFIRAGYSANASMILEKKDSVL 302


>gi|301624308|ref|XP_002941451.1| PREDICTED: differentially expressed in FDCP 6 homolog [Xenopus
           (Silurana) tropicalis]
          Length = 596

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/226 (9%), Positives = 74/226 (32%), Gaps = 14/226 (6%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +      +  +   +  L    +   +  R   +  ++A +    +   L+   E ++
Sbjct: 293 EWVTAIQTAIRLQQSGSISLHRELQKRRREQREQREQRRAARELEMQRLAELQNERERQQ 352

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           ++L     +      +     +   +R  + +    R +     + E K + ++A +   
Sbjct: 353 QEL----EQLREAQKRAEEIMLQEQHRHREQQEEMKRQLECQLREAEEKRASMQAEMQLK 408

Query: 196 Q----------KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +          ++L  ++   E+    +      E     +  +L     E+  +L  + 
Sbjct: 409 ETEGLQQRLRIQELEQLQEHLEEALAQEIRARHDEEAYRHAQAKLLMQEEEKLRVLLRMR 468

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E       +     +E+ +++    +   +   +L  + + RE+  
Sbjct: 469 EEQTHYVEKAQKEKQELQQEMTVKSKELREAQKQLEDVRENRERAD 514


>gi|71010532|ref|XP_758403.1| hypothetical protein UM02256.1 [Ustilago maydis 521]
 gi|46098145|gb|EAK83378.1| hypothetical protein UM02256.1 [Ustilago maydis 521]
          Length = 1539

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 71/192 (36%), Gaps = 15/192 (7%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E   L++ K+  ++ ++  +  E+  +     +     KAF       ++          
Sbjct: 705 ELRTLLNEKQEDLEEIQALLQREREQMQEQVQQ----AKAFSFETLDKIENERDEALERV 760

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +     +S +  S         ++ L   +L+ ++  LR  L S  +  + +++L E+ +
Sbjct: 761 RELQAQVSELTSSHADMDGDHAALQLRVRELQAETQSLREKLESTSQSTSQLESLREQTS 820

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +   ER +  +  +L +                D+++   +  L+ +  +L + Q
Sbjct: 821 TDAVRIRGLERRLNAANAQLAKG-----------ANARDQSDQSQSMQLESLQNELREAQ 869

Query: 271 RTFADEMSKLTI 282
              A+  +++  
Sbjct: 870 TYIAELEARVQA 881



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 74/223 (33%), Gaps = 23/223 (10%)

Query: 92  TTDLIDLKKVSIKN--LRCHIDTEKSALDFLNN-------KYDVLEKAFESREEQLLDFL 142
               +D  K+++    L   +D E  AL    +       +      +  S E Q ++  
Sbjct: 591 ARPRVDAAKLALYQSKLNARLDAENDALKRERDQLLQKLAQLQTASSSSTSAELQAVNQQ 650

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI----------YLNRLDLENKSSLLRALL 192
            +     +   +     +   +  K   + S+            +  DL N+   LR LL
Sbjct: 651 LQAERQRADALDKEAQELADLVDEKEREIESLKPAQGAPPSSENHEQDLRNQIQELRTLL 710

Query: 193 SSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           +  Q+DL  ++ L ++     Q  + Q +   +++  ++     E    +R +     E 
Sbjct: 711 NEKQEDLEEIQALLQREREQMQEQVQQAKAFSFETLDKIENERDEALERVRELQAQVSEL 770

Query: 252 NLEFANYLKE---ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               A+   +   +   + + Q        KL    ++  Q  
Sbjct: 771 TSSHADMDGDHAALQLRVRELQAETQSLREKLESTSQSTSQLE 813


>gi|327543164|gb|EGF29599.1| phytochrome sensor protein [Rhodopirellula baltica WH47]
          Length = 709

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 53/144 (36%), Gaps = 11/144 (7%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI---IKKFQ 71
                +    ++ +  L  W   + ++  V ++G           ++ F+GI   + + +
Sbjct: 417 TRHWILAGCMLLAVGLLAGW--FIRVDHHVVATGLARPAVR----QAMFAGIDGVVNELK 470

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V++G  + QG  L+  E+ E T         +      + + ++ L  L    D  + A 
Sbjct: 471 VKDGDVVRQGDVLVQLENPELTREAQALSGQLATATEKLSSVRAML--LAASDDSRDSAQ 528

Query: 132 ESREEQLLDFLGKYHSTCSKVFNY 155
              E+Q L+      +   ++   
Sbjct: 529 SILEQQTLENQIDSLNKRLQINRE 552


>gi|309360901|emb|CAP30592.2| CBR-MYO-5 protein [Caenorhabditis briggsae AF16]
          Length = 1979

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/217 (9%), Positives = 78/217 (35%), Gaps = 5/217 (2%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVSIKNLRC-HIDTEKSALDFLNNKYDVLEKAFESREEQ 137
             +       ++++ +  ++ K+          ++ + + +   +++   L +     + +
Sbjct: 1234 EKNDKQREVDELQQSADVEAKQRQNCERMAKQLEAQLTDITLKSDEQARLIQELTMSKNK 1293

Query: 138  LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            +       +          +S++ R  + +  +M  +         +   L + +S++Q 
Sbjct: 1294 IHSENHDLNRQLEDA-ESQLSALNRIKQQQHNQMEELKRTLDQETRERQSLHSQVSNYQL 1352

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +   ++   E+   ++ D+   +R + K+  E+++   + +       E  +E   +  +
Sbjct: 1353 ECEQLRESLEEEQDAKTDV---QRQLSKANSEIQQWRAKFEGEGVTRAEELEETRRKLTH 1409

Query: 258  YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             ++E+   LE   +           L    E   + +
Sbjct: 1410 KVQEMQEQLENANQKIGTLEKTKQRLAHDLEDAQVDA 1446



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 67/187 (35%), Gaps = 1/187 (0%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E  +  + K  +++  +  +  +        ++ + +  + E +++   D + +      
Sbjct: 1416 EQLENANQKIGTLEKTKQRLAHDLEDAQVDADRANSIASSLEKKQKG-FDKVLEEWRRKC 1474

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     +    R  +   T    +     +   ++  ++    +  ++L  + +   +  
Sbjct: 1475 EALVAEVEQSQRETRAAATETFRLRNQLEESGEQTEAVKRENKALAQELKDIADQLGEGG 1534

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             S +DL +  R +     EL++ + E +  L         A +E +    EI + L++  
Sbjct: 1535 KSVHDLQKLRRRLEIEKEELQQALDEAECALEAEEAKVMRAQIEVSQIRSEIEKRLQEKD 1594

Query: 271  RTFADEM 277
              F +  
Sbjct: 1595 EEFENTR 1601



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 67/202 (33%), Gaps = 6/202 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E     + K+  ++     ++ EK AL     +        E R  +LL          +
Sbjct: 876  EEKTQEERKRKDMEAENARLEAEKQALLIQLEQERDSSAEGEERSAKLLSQKADLEKQMA 935

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM----MKNLF 206
               N  +          + + + I  +   L+   S L   +   + +       +++L 
Sbjct: 936  N-LNDQLCDEEEKNAALVKQKKKIEQDNEGLKKTVSDLETTIKKQESEKQSKDHQIRSLQ 994

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            ++   SQ+++  +     K   E+   + E            ++   +  + L E+   L
Sbjct: 995  DE-IQSQDEVISKLNKEKKHQEEVNRKLLEDIQAEEDKVNHLNKTKAKLESTLDELEDTL 1053

Query: 267  EQNQRTFADEMSKLTILEKTRE 288
            E+ +R   D   +   +E   +
Sbjct: 1054 EREKRGRQDCEKQKRKVEGELK 1075



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 59/167 (35%), Gaps = 5/167 (2%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH--STCS 150
                  K   I++L+  I ++   +  LN +    E+      E +     K +  +   
Sbjct: 980  ESEKQSKDHQIRSLQDEIQSQDEVISKLNKEKKHQEEVNRKLLEDIQAEEDKVNHLNKTK 1039

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +  +  +L+ +    +     +  +E +  + + L+    +     + + +K  
Sbjct: 1040 AKLESTLDELEDTLEREKRGRQDCEKQKRKVEGELKIAQELIEELNRHKHEQEQVLKKKD 1099

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +   +LN  +  +      + +   + K +L  I EL +E  ++   
Sbjct: 1100 I---ELNSLQSRLEDEQSLVAKLQRQIKELLARIQELEEEPTMKDNQ 1143



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 71/209 (33%), Gaps = 20/209 (9%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D E  +       +I++++  ++TE      L      LE      E  L          
Sbjct: 1594 DEEFENTRKNHSRTIESMQVSLETESRGRAELLKTKKKLEGDVNELEIALDHSNKLNVDG 1653

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
               +    +    R L++++   +       D  N +     +L   ++DL ++      
Sbjct: 1654 QKSI--KKLQDTIRELQLQVEEEQRSLNEVRDHANLAERRSQVLQQEKEDLAII------ 1705

Query: 209  NAVSQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
                     Q ER   ++ LEL E   +++E  N    +     +   +  +   E+   
Sbjct: 1706 -------YEQSERSRRQAELELAEVKDSVNELSNSNSLLLATKRKVEGDLQHLQSEVEEA 1758

Query: 266  LEQNQRTFADEMSKLTILEKTREQKTILS 294
            L       +D+ +K  I++ ++    + S
Sbjct: 1759 LSDA--KVSDDKAKKAIMDASKLADELRS 1785


>gi|288935400|ref|YP_003439459.1| secretion protein HlyD [Klebsiella variicola At-22]
 gi|288890109|gb|ADC58427.1| secretion protein HlyD family protein [Klebsiella variicola At-22]
          Length = 347

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/376 (12%), Positives = 105/376 (27%), Gaps = 78/376 (20%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              ++  I S  SG I++  V++   + +G  L+              ++  ++ R  + 
Sbjct: 44  VGGDISAISSKVSGYIQQLAVQDNMAVKKGDLLI--------------RIDDRDYRAALA 89

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             K+A +    +  + +     + +Q            +      +++  R         
Sbjct: 90  --KAAGEVAAQQAALADILATRQLQQATIAGSAASLLAATAATEKLANDNRRYNALAASS 147

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                 R +                                             ++ + R
Sbjct: 148 AISAQIRDN---------------------------------------------ASADYR 162

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               EQ+      ++   E  L   +  +      +Q     A   + L +         
Sbjct: 163 RAHAEQEKAKA--DKTVAERQLAVLDARQ------QQTLAALAQAQANLEMARLNLSYTD 214

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I +P  G I  N+   S ++      L+ +VP     +I A     Q+ H++ G   T+ 
Sbjct: 215 IRAPFDGVI-GNRRAWSGSFVSSGTQLLSLVPAHG-LWIDANFKENQLAHMRAGQPVTIV 272

Query: 352 FPHYADIREKK-----FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
                +   K        A   +   + ++      T+    V ++I           LR
Sbjct: 273 ADVLPNHTFKGHVASLAPATGSRFSILPAENATGNFTKIVQRVPVRIALEGDGAKLDVLR 332

Query: 407 NGFPAEVLFTAKNTTL 422
            G    V+ T    + 
Sbjct: 333 PGL--SVIVTVNEKSP 346


>gi|288940329|ref|YP_003442569.1| RND family efflux transporter MFP subunit [Allochromatium vinosum
           DSM 180]
 gi|288895701|gb|ADC61537.1| efflux transporter, RND family, MFP subunit [Allochromatium vinosum
           DSM 180]
          Length = 374

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 16/126 (12%)

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E    + ++L+P+AG +    + +  +  Q    L++++        RA+V   ++  ++
Sbjct: 181 ELRLSRTSVLAPVAGIVASLSA-TQGSLVQPGDELLRLI-RDSRLEWRAEVPATELARLQ 238

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G  A +  P             I ++ P I  +           V + +   A      
Sbjct: 239 PGGPARILAP-----DGTPVNGQIRRVAPTIDARTLTG------LVYVDLPAEATGR--- 284

Query: 404 ELRNGF 409
            LR G 
Sbjct: 285 PLRAGM 290


>gi|195385120|ref|XP_002051256.1| GJ13256 [Drosophila virilis]
 gi|194147713|gb|EDW63411.1| GJ13256 [Drosophila virilis]
          Length = 1951

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 78/210 (37%), Gaps = 8/210 (3%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            +     E  DL       ++NL   +   ++ L         L+   E+    L      
Sbjct: 1419 IKLLLSEANDLNKNLAQKVENLESELLQAQTELTTQRATTQQLQSELETTLR-LKSSACS 1477

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS-SLLRALLSSHQKDLTMMK 203
              S+ ++      +++          +  +  ++ +L+ K  SLL   +   + +  +  
Sbjct: 1478 EQSSLTEKLKEVEATILEQAHQFEQNLNELQGSKNELQLKLDSLLSQKVELEETNHKLTV 1537

Query: 204  NLFEKNAVSQNDLNQQER----IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             L  KN ++  +L ++ER     + KS  EL+  I +++     ++    +  +  A   
Sbjct: 1538 KL--KNVLNLQNLLEKEREHNAQLQKSNAELQSKIEDKETTSESLSAALQQQKVASAQLE 1595

Query: 260  KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              ++    +  R   +  +++  L++  ++
Sbjct: 1596 DRLAAATTEANRNADELRTQIKTLQQEVDR 1625



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 70/193 (36%), Gaps = 13/193 (6%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            +D  K++IK L   +  E+       +    L    E+   +  ++LGK  +  +K+ + 
Sbjct: 1336 VDESKLTIKRLTNDLQAEQQKWQQQASLVQQLGAELEANAAEKTEYLGKVETLNNKIEDL 1395

Query: 156  GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             +             ++   L  +D +      R +     +   + KNL +K    +++
Sbjct: 1396 AVK------------LKQATLRAVDFDKLVDDHRQIKLLLSEANDLNKNLAQKVENLESE 1443

Query: 216  LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
            L Q +  +       ++   E +  LR  +    E        LKE+   + +    F  
Sbjct: 1444 LLQAQTELTTQRATTQQLQSELETTLRLKSSACSE-QSSLTEKLKEVEATILEQAHQFEQ 1502

Query: 276  EMSKLTILEKTRE 288
             +++L   +   +
Sbjct: 1503 NLNELQGSKNELQ 1515



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 80/195 (41%), Gaps = 9/195 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            E   LID  + +I  +R  +   +SAL     + NK +  ++  ES E+Q  +       
Sbjct: 936  EKNTLIDATESTINEMREQMTNLESALLEKSVIVNKVEDYQRQIESLEKQHAEMTMVCEE 995

Query: 148  TCSKVFNYGISS---VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
               KV    I+    +  S +  ++           L+ + S L A L+  Q  +    +
Sbjct: 996  LQEKVKENTINESLLMSNSTQTLMSDDSVPQQEIDALKTRLSDLNAELNGLQAQIHQKDD 1055

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML-RHINELYDEANLEFANYLKEIS 263
              EK      +LN++   +    +ELR N  + + +L R  ++L D+AN    + L+E +
Sbjct: 1056 FIEKIQSELQELNERCMSMDVLQVELRANARQNQQLLDRQASKLTDDAN--RIDKLQESN 1113

Query: 264  RDLEQNQRTFADEMS 278
              L +      + + 
Sbjct: 1114 AQLLERSIKAEEMVE 1128


>gi|160332463|dbj|BAF93222.1| myosin heavy chain fast skeletal type 1 [Hypophthalmichthys molitrix]
          Length = 1933

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 80/214 (37%), Gaps = 12/214 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ----LLDFLG 143
            +  E+ + ++ K  S++  +  +  E   L     + + L      ++      L D+  
Sbjct: 1398 DAEESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANALAANLGKKQRNFDKVLADWKQ 1457

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY  + +++   G     RSL  +L +M++ Y   LD       L+    + Q++++ + 
Sbjct: 1458 KYEESQAEL--EGAQKEARSLSTELFKMKNSYEEALD---HLETLKRENKNLQQEISDLT 1512

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                +   S ++L + ++ V     E++  + E +  L H         LE      EI 
Sbjct: 1513 EQLGETGKSIHELEKAKKTVESEKSEIQSALEEAEGTLEHEESKILRVQLELNQVKSEID 1572

Query: 264  RDLEQNQRTFADEM---SKLTILEKTREQKTILS 294
            R L +             ++    ++     + S
Sbjct: 1573 RKLAEKDEEMEQIKRNSQRVIDSMQSTLDSEVRS 1606



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 79/217 (36%), Gaps = 15/217 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1205 QIDNLQRVKQKLEKEKS--EYKMEIDDLTSNMEAVAKSKANLEKMCRTLEDQLSEIKAKS 1262

Query: 146  HSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDL 199
                 ++         + +       +L    ++        +     +  L    ++++
Sbjct: 1263 DENTRQLSDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAYVQQIEELKRHIEEEV 1322

Query: 200  TMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHINELYD----EAN 252
                 L      +++D   L +Q     ++  EL+  + +  + +      Y+    +  
Sbjct: 1323 KAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1382

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E  +  K++++ L+  + +     SK   LEKT+++
Sbjct: 1383 EELEDSKKKLAQRLQDAEESIEAVNSKCASLEKTKQR 1419



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K   I      I+ E+S    L  K   L+   
Sbjct: 1055 EGDLKLAQESIMDLENDKQQSDEKIKKKDFEISQFLSKIEDEQSLGAQLQKKIKELQARI 1114

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1115 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1168

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1169 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1223

Query: 252  NLEFANYLKEIS------RDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +    +        +LE+  RT  D++S++        ++
Sbjct: 1224 KMEIDDLTSNMEAVAKSKANLEKMCRTLEDQLSEIKAKSDENTRQ 1268



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 73/203 (35%), Gaps = 14/203 (6%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            L  + ++    +D      +N         T+ + +     K        E  ++ L   
Sbjct: 1729 LEADLVQVQGEVDDSVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEVT 1788

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            +        +  +  +  V + L+   +R+R +     ++E +       +   +K    
Sbjct: 1789 VKDLLHRLDEAESLAMKGVKKQLQKLESRVRELES---EVEAEQRRGADAVKGVRKYERR 1845

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +K L  +    + ++ + + +V K  L++       K+  R   E  ++AN   + Y K 
Sbjct: 1846 VKELTYQTEEDKKNVIRLQDLVDKLQLKV-------KSYKRQAEESEEQANTHLSRYRK- 1897

Query: 262  ISRDLEQNQRTFADEMSKLTILE 284
            +  +LE+ Q       S++  L 
Sbjct: 1898 VQHELEEAQERADIAESQVNKLR 1920


>gi|154246393|ref|YP_001417351.1| RND family efflux transporter MFP subunit [Xanthobacter
           autotrophicus Py2]
 gi|154160478|gb|ABS67694.1| efflux transporter, RND family, MFP subunit [Xanthobacter
           autotrophicus Py2]
          Length = 428

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V +SG +     +V + +  SG I   +V  G ++  G  +   + +   + +   
Sbjct: 69  VAETVLASGTLKPS-RLVAVGAQASGRITSVKVRLGQKVTAGDLVAEIDSVTQQNALGTA 127

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S+ N+R     +++ L    N+  +  +     ++ +     +      KV    +++
Sbjct: 128 EASLANVRAQKAEKEATLGL--NEQTLARQRTMVAQKAVSQADFETAEAAVKVTRAQLAA 185

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +      + +   N
Sbjct: 186 LEAQIVEAAIAVETARAN 203



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 66/228 (28%), Gaps = 27/228 (11%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQN 269
            S  ++  Q+     +     + +  Q+ M+    +   +A+ E A    ++    L   
Sbjct: 129 ASLANVRAQKAEKEATLGLNEQTLARQRTMVAQ--KAVSQADFETAEAAVKVTRAQLAAL 186

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KL 327
           +    +    +           I +PI GT++             +Q    IV      +
Sbjct: 187 EAQIVEAAIAVETARANLGYTRITAPIDGTVLAL-VAQEGQTVNATQSAPTIVILGALDV 245

Query: 328 TYIRAKVTPKQIQHVKKGYTA--------TVRF--------PHYADIREKKFKAIIEKID 371
             +RA+++   I  V    +          +R+        P    I+            
Sbjct: 246 MTVRAEISEADIVKVAPSMSLWFTILGAPDIRYDGKLAFIEPAPETIKTDSSFTTTSTSS 305

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              S   ++  +  YY  +  + +         LR    AEV      
Sbjct: 306 SSSSSSSSSSSSAIYYMGLFDVPNPE-----GRLRTYMTAEVHIVLGE 348


>gi|114213578|gb|ABI54346.1| Abnormal dye filling protein 14, isoform a, partially confirmed by
            transcript evidence [Caenorhabditis elegans]
          Length = 1840

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 76/199 (38%), Gaps = 10/199 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK-------- 144
             +    ++  I++++  I T +  L    +K   L K  E    QL D L          
Sbjct: 1402 EESSRSREHEIRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHDALESKEKATGLV 1461

Query: 145  -YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +  +     +    R  ++ + + R       +L  K   L        +++T  +
Sbjct: 1462 GVQDSKHRDLEEQLDRANRERELAIGKQRRTLAENENLFRKLEQLEKEREQLMREITDER 1521

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+N  S  +L   ER    +    ++   EQ+  ++     ++E+N E  N    ++
Sbjct: 1522 RLNERNRTSLEELRVSERTWKSAMTTAKKPAEEQERAVQE-QRRWEESNHEMTNRNTALT 1580

Query: 264  RDLEQNQRTFADEMSKLTI 282
            ++ ++ +    D+++++  
Sbjct: 1581 KECDRLRVEMRDQLNRMNG 1599



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 73  ENGSQILQGTPLLTFEDIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
               + L+G       D++   L +D+ +     L+  ++TE+   D  + +        
Sbjct: 500 RETQRSLKGDVAAMKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECRAKL 559

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +   E+  +   +     + +                S     T    I     ++ENK+
Sbjct: 560 DEMAEKEAELRKELAEFQAIITAMEGEGKLNQEQFLESKNELNTLTDQIESLNSEVENKN 619

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLR 242
             +R L+++ Q+    ++N+   +        +    +     E   L E ++E+   + 
Sbjct: 620 EEIRNLMATLQEKEVHIQNVRTSSHQLTATYEEANGEIDILKAELTRLHEQVNERTRQIS 679

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             NE YD+A  +    L++++   ++       E+ ++    + +E++ 
Sbjct: 680 EANEKYDDAARKNDALLEDVAT-WQEKYEQLKMELEEMNRRGQEKEREE 727



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 68/208 (32%), Gaps = 14/208 (6%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH---------S 147
           +  +      R   + E+S  + +  + D L +   S +  +                  
Sbjct: 469 EALRSKDTEERSRFEKERSEREKIRRESDELRETQRSLKGDVAAMKTDLDDKTLRLDMLE 528

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---N 204
           T        + +       +   +        ++  K + LR  L+  Q  +T M+    
Sbjct: 529 TERDELKKKLETEREQADQRDLEIAECRAKLDEMAEKEAELRKELAEFQAIITAMEGEGK 588

Query: 205 LFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           L ++  + S+N+LN     +     E+     E +N++  + E              +++
Sbjct: 589 LNQEQFLESKNELNTLTDQIESLNSEVENKNEEIRNLMATLQEKEVHIQN-VRTSSHQLT 647

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
              E+         ++LT L +   ++T
Sbjct: 648 ATYEEANGEIDILKAELTRLHEQVNERT 675


>gi|302385646|ref|YP_003821468.1| efflux transporter, RND family, MFP subunit [Clostridium
           saccharolyticum WM1]
 gi|302196274|gb|ADL03845.1| efflux transporter, RND family, MFP subunit [Clostridium
           saccharolyticum WM1]
          Length = 459

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 103/302 (34%), Gaps = 18/302 (5%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            K +V+E    S   Q  D +    +  +++    +    R  K ++  +      + ++
Sbjct: 90  AKGEVVEMLSVSGPVQGTDSVEVVSNLHAEILELPVKEGDRVEKGQILAVLDDKDAKKEV 149

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +   +     LS++Q      +N + K   ++ D    +    ++    +     Q  + 
Sbjct: 150 DIAQNAYDLALSTYQDKQLEAENGYAK---AKQDYETAKANYDRTLALFQGGSASQVELE 206

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS--KLTILEKTREQKTILSPIAGT 299
              N + ++A  E ++Y  +  R +     +   E    +L   ++      + SPIAGT
Sbjct: 207 TASNAM-NDAQREMSSYTLKDGRPVANESYSLQIEKEAFELEQKKEALNNTKVTSPIAGT 265

Query: 300 IVYNQSFSSSNYA--QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           +V         +A        M I+ +  +  ++  V+   I  V  G    +       
Sbjct: 266 VVRVNC-KVGRFADKTDDDKPMFIINNLDVLEMKINVSEYSIGKVAIGQPVEI--SA-DI 321

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +  +  +  +  I P   ++ N           +  T +   D N  L  G  A+     
Sbjct: 322 LNGETARGEVTAISPTGEEKGNGSTE------RVIPTTIRIIDQNTSLIAGITAKAKIEL 375

Query: 418 KN 419
           + 
Sbjct: 376 QK 377



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 63/213 (29%), Gaps = 20/213 (9%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEIL----NEDNVV---- 57
           W   ++        + +  +   +     S+ +P+ +S  + GE++        V     
Sbjct: 50  WSKKRKIITIGAAAIGVFFVAFKVMAGGGSMAVPVTVSPLAKGEVVEMLSVSGPVQGTDS 109

Query: 58  --EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC-----HI 110
              + +  + I+ +  V+ G ++ +G  L   +D +    +D+ + +            +
Sbjct: 110 VEVVSNLHAEIL-ELPVKEGDRVEKGQILAVLDDKDAKKEVDIAQNAYDLALSTYQDKQL 168

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           + E        +      KA   R   L               N    +        L  
Sbjct: 169 EAENGYAKAKQDYET--AKANYDRTLALFQGGSASQVELETASNAMNDAQREMSSYTLKD 226

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            R +      L+ +       L   ++ L   K
Sbjct: 227 GRPVANESYSLQIEKEAFE--LEQKKEALNNTK 257


>gi|227540262|ref|ZP_03970311.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227239906|gb|EEI89921.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 352

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 16/148 (10%)

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
             + L+Q +     +++ L   +      T+ + I+GTI   +      Y      +  +
Sbjct: 137 TQQQLDQAKLKMESDLNNLKSAQLNASDATVRAGISGTINERKI-EPGTYVSPGTEMFSL 195

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V +     +R  V  K +  +K G    +    Y D   K F+  I  I P      N  
Sbjct: 196 V-NVGTLKLRVNVDEKNVVKLKVGQNIKITASVYPD---KSFEGKITFIAPKADGSLN-- 249

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGF 409
                + V +++     ++ N ELR G 
Sbjct: 250 -----FPVEIEV----KNNPNNELRAGM 268



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 32/103 (31%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V+ G  +  G  L T    +        + S    +   +  K+A        
Sbjct: 79  GRVKTVLVDEGDFVTAGQVLATVVGDKLNVNTQNAQASYNTSKADYERYKNAFQTGGVTQ 138

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             L++A    E  L +      +        GIS      K++
Sbjct: 139 QQLDQAKLKMESDLNNLKSAQLNASDATVRAGISGTINERKIE 181


>gi|254425623|ref|ZP_05039340.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
 gi|196188046|gb|EDX83011.1| efflux transporter, RND family, MFP subunit [Synechococcus sp. PCC
           7335]
          Length = 436

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/249 (12%), Positives = 87/249 (34%), Gaps = 21/249 (8%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-----LNQQERIV 223
            +   +     +L ++ S L  L +  + ++   +    ++A ++       L + + +V
Sbjct: 121 DQQLLLSQAIANLASEQSNLAELETGTRPEIIEQRTAVLQSAEAREQEARDNLQRTQALV 180

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +  L  R  I  +  +   ++   + +           + +L   +       + +   
Sbjct: 181 AQGALSERSLIEARTAVDAALSAKLESSATLAEATAGPTAEELAAQRAIVTARRAAVEQA 240

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           E +  +  + + I+G +V  +  +  +Y +  +P++ +V   +   +  ++  +    + 
Sbjct: 241 ELSLSRTRLQTTISG-VVEERVANVGDYMEAGEPVLSLV-DREDLDVFLEIPEELSGQIA 298

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G   TV            ++     ID +I   +   + Q    V L+I +        
Sbjct: 299 PGL--TVMLTA---RALPGWQGQAT-IDGVIPTANETSRRQ---RVRLQIENTPAG---- 345

Query: 404 ELRNGFPAE 412
            L  G   +
Sbjct: 346 -LLPGMSVQ 353



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 86/212 (40%), Gaps = 3/212 (1%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI-DTEKSA 116
            ++S  SG+++K  V++G ++  GT +   +D +   L+     ++ + + ++ + E   
Sbjct: 88  TLRSQTSGVVQKILVQSGDRVDVGTTVAVLDDADQQLLLSQAIANLASEQSNLAELETGT 147

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
              +  +   + ++ E+RE++  D L +  +  ++      S +     +       +  
Sbjct: 148 RPEIIEQRTAVLQSAEAREQEARDNLQRTQALVAQGALSERSLIEARTAVDAALSAKLES 207

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           +    E  +      L++ +  +T  +   E+  +S +   + +  +     E   N+ +
Sbjct: 208 SATLAEATAGPTAEELAAQRAIVTARRAAVEQAELSLSR-TRLQTTISGVVEERVANVGD 266

Query: 237 QKNMLRHINELYDEANLE-FANYLKEISRDLE 267
                  +  L D  +L+ F    +E+S  + 
Sbjct: 267 YMEAGEPVLSLVDREDLDVFLEIPEELSGQIA 298


>gi|157738615|ref|NP_001099034.1| coiled-coil alpha-helical rod protein 1 isoform 1 [Homo sapiens]
 gi|123287170|emb|CAM25639.1| coiled-coil alpha-helical rod protein 1 [Homo sapiens]
 gi|220860578|emb|CAX15089.1| coiled-coil alpha-helical rod protein 1 [Homo sapiens]
          Length = 871

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 79/204 (38%), Gaps = 5/204 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + L+   ++  R  +D E      L  +     +     E Q L  + +      +   
Sbjct: 589 DVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQ 648

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAVS 212
             ++S+   L++     +        L  + +  + L   +  +K   +   L E+ + +
Sbjct: 649 ESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDT 708

Query: 213 QNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +  LN+  R   K+ + LR+      ++K   + +  L +EA  E    L    ++LE++
Sbjct: 709 ERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERD 768

Query: 270 QRTFADEMSKLTILEKTREQKTIL 293
           +      + +  +L + ++Q+ + 
Sbjct: 769 KNLMLATLQQEGLLSRYKQQRLLT 792



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E ++  L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 174 QALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEA- 232

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+   SQ +L + +R+  +    L +   E  + L    E  
Sbjct: 233 -EGLRAALAGAEVVRKNLEEG--SQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGL 289

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 290 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 332



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 69/218 (31%), Gaps = 10/218 (4%)

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V    ++ +    +      +       +     L      EK+           L
Sbjct: 180 AEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAAL 239

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSV----YRSLKMKLTRMRSIYLNRLDLEN 183
             A   R + L +   +      ++    +SS+      +L    ++   +  +   LE 
Sbjct: 240 AGAEVVR-KNLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLET 298

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +     L+  Q++  +++    K   +Q DL  Q  +V      + E +  +  +   
Sbjct: 299 RRAGEAKELAEAQREAELLRKQLSK---TQEDLEAQVTLVENLRKYVGEQVPSE--VHSQ 353

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             EL  +  LE   +L+E    L          +  LT
Sbjct: 354 TWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLT 391


>gi|117623057|ref|YP_851970.1| macrolide transporter subunit MacA [Escherichia coli APEC O1]
 gi|162138462|ref|YP_539900.2| macrolide transporter subunit MacA [Escherichia coli UTI89]
 gi|218557782|ref|YP_002390695.1| macrolide transporter subunit MacA [Escherichia coli S88]
 gi|237707156|ref|ZP_04537637.1| macrolide-specific efflux protein MacA [Escherichia sp. 3_2_53FAA]
 gi|115512181|gb|ABJ00256.1| macrolide-specific efflux protein MacA precursor [Escherichia coli
           APEC O1]
 gi|218364551|emb|CAR02235.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli S88]
 gi|226898366|gb|EEH84625.1| macrolide-specific efflux protein MacA [Escherichia sp. 3_2_53FAA]
 gi|294489827|gb|ADE88583.1| macrolide-specific efflux protein MacA [Escherichia coli IHE3034]
 gi|307627712|gb|ADN72016.1| macrolide transporter subunit MacA [Escherichia coli UM146]
 gi|315287288|gb|EFU46699.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           110-3]
 gi|323953418|gb|EGB49284.1| efflux transporter [Escherichia coli H252]
 gi|323958167|gb|EGB53876.1| efflux transporter [Escherichia coli H263]
          Length = 371

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKINDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 52/138 (37%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EAMLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNA--ATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|118395480|ref|XP_001030089.1| hypothetical protein TTHERM_01151570 [Tetrahymena thermophila]
 gi|89284378|gb|EAR82426.1| hypothetical protein TTHERM_01151570 [Tetrahymena thermophila
           SB210]
          Length = 1370

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 110/252 (43%), Gaps = 22/252 (8%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS--IKNLRCHIDTEKSALD 118
           S F G+I++  V N     Q   +L +E+       ++KKV+    +L   I  EKS  D
Sbjct: 517 SIFGGVIQQILVNN---PFQNDIILKYENKIKEIEEEMKKVTSKYDDLNLQIIYEKSEKD 573

Query: 119 FLNNKYDVLEKAFESREEQLLDF--LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
               +  V+++  +S  +++++     +   +  +++   +SS+Y+ + +K+   +   +
Sbjct: 574 EALAEKQVIQEMLDSSNKKIIELKEQNRNKESRIQLYQNILSSIYKHIGVKIDDSQFDAV 633

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           N  D E K+S         + D T ++ L E++ + +  L+  E I      +    + +
Sbjct: 634 NLDD-EKKTSTKEFKKKMAKIDKTSLRRLREESIIGEKMLDTHEEIFQNLPTQTVGTMTD 692

Query: 237 --------------QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                         +K + +   E+ ++   +F     + + ++ Q ++++ DE+ KL  
Sbjct: 693 LMNLQIPIVYQNSIEKQLKQSKKEIAEQFQKQFDTLQNQFTNEIIQQKKSYEDEIQKLKQ 752

Query: 283 LEKTREQKTILS 294
             ++R Q    S
Sbjct: 753 NAQSRSQSRKTS 764


>gi|510186|emb|CAA82974.1| liver stage antigen-1 [Plasmodium falciparum]
          Length = 318

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 62/167 (37%), Gaps = 7/167 (4%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E+R+E L +   K      +  +         L+ + + +    L +  L+ + S L   
Sbjct: 143 ENRQEDLEEKAAKEKLQGQQSDSEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQE 202

Query: 192 LSSHQKDLTMM-----KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             + +K          + L ++    Q    +QER   +   E + ++ +++     + E
Sbjct: 203 RRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQE 262

Query: 247 LYDEANLEF--ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +   E      L+E   DLEQ++        + + LE+ R  K 
Sbjct: 263 QQSDLEQERLAKEKLQEQQSDLEQDRLAKEKLQEQQSDLEQERRAKE 309



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 53/141 (37%), Gaps = 5/141 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      +  
Sbjct: 183 EQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKL---QEQQSDLEQERRA 239

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    Q
Sbjct: 240 KEKLQEQQSDLEQERRAKEKLQEQQSDLE-QERLAKEKLQEQQSDLEQDR-LAKEKLQEQ 297

Query: 214 NDLNQQERIVYKSTLELRENI 234
               +QER   +   E + ++
Sbjct: 298 QSDLEQERRAKERLQEQQSDL 318


>gi|325127650|gb|EGC50565.1| macA [Neisseria meningitidis N1568]
          Length = 393

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 39  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE 97

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 98  KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELK 157

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 158 ALIRQSKISINTAES 172



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 78/262 (29%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 56  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 107

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        N    E      +       ++ + +         +
Sbjct: 108 LVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELKALIRQSKISI 167

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    I+  +   +   + ++    
Sbjct: 168 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSAPTIIQLANLDMMLNKMQIAEGD 226

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 227 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 283

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 284 SFVP-----NPDGKLATGMTTQ 300


>gi|309788390|ref|ZP_07682994.1| uncharacterized protein ydhJ [Shigella dysenteriae 1617]
 gi|308923772|gb|EFP69275.1| uncharacterized protein ydhJ [Shigella dysenteriae 1617]
          Length = 235

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 61/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            +L     +       + +  +EAN           
Sbjct: 9   NIKDNQLVNAGDLLLTIDKTPFQIAKLNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 67

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 68  AEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 126

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V  +    I      K+      H+++G  A +          K  +  +  I 
Sbjct: 127 KPLFALVDSNSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 177

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 178 RAIYDQS 184



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/105 (11%), Positives = 30/105 (28%), Gaps = 9/105 (8%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETT-----DLIDLKKVSIKNLRCHIDTEKSALD 118
           SG I +  +++   +  G  LLT +              L K      + + +  +    
Sbjct: 2   SGRIVRLNIKDNQLVNAGDLLLTIDKTPFQIAKLNAQAQLAKAQSDLAKANNEANRRRHL 61

Query: 119 FLNN----KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             N     + D      ++ +  +            ++    I +
Sbjct: 62  SQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 106


>gi|289661822|ref|ZP_06483403.1| membrane fusion protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 412

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/135 (10%), Positives = 44/135 (32%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +     G +     + G ++ +G  L   +        D    + 
Sbjct: 64  ASALGTVT-ALNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAK 122

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +      N+      V     +++  Q+  +     +  +++ +  +   
Sbjct: 123 RQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVAANDAQMRSAQVQLQ 182

Query: 161 YRSLKMKLTRMRSIY 175
           +  +   +  +  I 
Sbjct: 183 FTRVTAPIDGIAGIR 197


>gi|270158483|ref|ZP_06187140.1| RND family efflux transporter [Legionella longbeachae D-4968]
 gi|289166685|ref|YP_003456823.1| cation efflux system protein [Legionella longbeachae NSW150]
 gi|269990508|gb|EEZ96762.1| RND family efflux transporter [Legionella longbeachae D-4968]
 gi|288859858|emb|CBJ13844.1| putative cation efflux system protein [Legionella longbeachae
           NSW150]
          Length = 391

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 74/195 (37%), Gaps = 26/195 (13%)

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +   ++ +  ++L+   E  + A  +         +D+EQ Q ++    +++   + T 
Sbjct: 142 AQAYSDLAKALSILKQTQETLNRAQ-KVNRAGANSVKDIEQAQSSYTQAFAEVQRAQATL 200

Query: 288 EQK--------TILSPIAGTIVYNQSFSSSNYAQ-QSQPLMKIVPHSKLTYIRAKVTPKQ 338
           +           I +PI G ++    +   +Y    + P++ +  + +  +I A V    
Sbjct: 201 KSLGNNEPGILRIQAPIDGKVIAIN-YGIGSYINDPATPILTLS-NIQSVWIAACVPEHL 258

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  V KG   ++    Y       ++  +  ID +I       +           T +AF
Sbjct: 259 IALVNKGLKTSISLIAYPHQ---VWEGQVAFIDNLIDPFTRCNK-----------TRIAF 304

Query: 399 SDNNIELRNGFPAEV 413
           ++ N +L+    A V
Sbjct: 305 ANANHKLQPNMFATV 319


>gi|237729245|ref|ZP_04559726.1| secretion protein HlyD family protein [Citrobacter sp. 30_2]
 gi|226908974|gb|EEH94892.1| secretion protein HlyD family protein [Citrobacter sp. 30_2]
          Length = 355

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 73/196 (37%), Gaps = 19/196 (9%)

Query: 17  LKRMTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
             R   +SI   + +  W I+     P+    +    +    + V      SG + +  V
Sbjct: 8   FARWVRVSIAAFLVIFAWFIVADIWIPLTPDSTVMRVVTPVSSRV------SGYVSQVHV 61

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR-------CHIDTEKSALDFLNNKYD 125
            N SQ+ +G  L   +     + ++  +++++  +         I + ++ L        
Sbjct: 62  HNNSQVKKGDLLYELDPTPFINKVEAAQIALEQAKLSNQQLDAQIASARANLRTAQFNAR 121

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             +  F+ R ++L        S   KV     +S  +S+      ++++ + R + ++K 
Sbjct: 122 NDKTTFD-RYQRLSAMQNVSQSDLDKVRTAWQTS-EQSVAALNASIQNLLIQRGERDDKR 179

Query: 186 SLLRALLSSHQKDLTM 201
           ++      +  ++  +
Sbjct: 180 NVTLQKYRNTLEEAQL 195


>gi|124010439|ref|ZP_01695080.1| HlyD family secretion protein, putative [Microscilla marina ATCC
           23134]
 gi|123983476|gb|EAY23956.1| HlyD family secretion protein, putative [Microscilla marina ATCC
           23134]
          Length = 351

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 74/213 (34%), Gaps = 16/213 (7%)

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           +M  L +   V +     + +++ + + + +++ +E     +   E              
Sbjct: 74  LMPGLVKDIYVKEGQRVSKGQLLARLSQDSQQSGYELALAKQKHAEHAYHNLKPMYKSGS 133

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                  + +  +    + + + +       + +P++G I   +       A    P+++
Sbjct: 134 LPEMKWVEVKTGYEQANAAVALAKTNLNNGDLHAPVSGVI-GRKMLEPGMTALPGTPVIQ 192

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +V       ++  V   +I  +K G  A ++     D   K F   + +I  + +     
Sbjct: 193 LV-QLHQLSVKVSVPEGEISQIKTGQQAQIKISALQD---KVFAGTVTEIGVMANAISRT 248

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                 Y+V +     A ++   E++ G   +V
Sbjct: 249 ------YDVKI-----AIANVQNEIKPGMMCQV 270



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            L   E ++S SG I    ++  +     G++K   V+ G ++ +G  L           
Sbjct: 49  ALSKTEGNLSYSGTIEPSTSI-PLSFLMPGLVKDIYVKEGQRVSKGQLLARLSQDSQQSG 107

Query: 96  IDLKKVSIK 104
            +L     K
Sbjct: 108 YELALAKQK 116


>gi|91776144|ref|YP_545900.1| secretion protein HlyD [Methylobacillus flagellatus KT]
 gi|91710131|gb|ABE50059.1| secretion protein HlyD [Methylobacillus flagellatus KT]
          Length = 412

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 53/152 (34%), Gaps = 14/152 (9%)

Query: 35  SILLPIEISVSSS----------GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           S +  ++++V +           G +   + V EI+   SG + K   ++G  + +G  L
Sbjct: 42  SNIASVDVAVVAQQDITDWQDYSGRLEAVERV-EIRPLVSGTLTKIHFKDGDLVRKGDLL 100

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDF 141
            T +       +   +  +      +D    +    + L     +  + FE +    L+ 
Sbjct: 101 FTIDPRPFEAEVARAQAQLSGAEARLDYTSHDLERAERLIGDNAIARRDFEEKRNAALEA 160

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                +  + +    ++  Y  +   ++   S
Sbjct: 161 KAALLAAQAALQTARLNLEYSRITAPVSGRIS 192


>gi|33240270|ref|NP_875212.1| DevB-like secretion protein [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|33237797|gb|AAP99864.1| DevB-like secretion protein [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 284

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 89/242 (36%), Gaps = 18/242 (7%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSG-----IIKKFQVENGSQILQGTPLLTFEDI-ETTDL 95
            +V++ G++     +  + +P SG      IK   +  G ++ +G  L  F++  + T  
Sbjct: 29  EAVAALGQLSPSGEIRSLAAPTSGFGGTPRIKTILISEGDKVQKGQILAIFDNQPKITAD 88

Query: 96  IDLKKVSIKNLRCHIDTEKSALD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +DL +  +  +   I ++K  +       ++       F+   + L + LG+ +   +++
Sbjct: 89  LDLSQARLNKINKKIISQKREVARYKESVSEGATPRMIFDRENDYLTELLGERNEILAEI 148

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               +  +   LK  +  +     +R   E +      +L      L  M+ L E   V 
Sbjct: 149 KGLEVDLLDTQLKSPINGIVLKINSR---EGERPSSEGVLKVGSSQL--MEALIE---VY 200

Query: 213 QNDLNQQE-RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++D+N+           E           ++ I+    +  +   +   +    + + + 
Sbjct: 201 ESDINRIRLGQNVSLISENGGFSGTLLGQVKRISPQVRQRRVLTTDPTGDADARVVEVRI 260

Query: 272 TF 273
           T 
Sbjct: 261 TL 262



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 62/209 (29%), Gaps = 26/209 (12%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q  +     +      ++ + I  QK  +    E   E       + +E +  L +    
Sbjct: 82  QPKITADLDLSQARLNKINKKIISQKREVARYKESVSEGATPRMIFDRE-NDYLTELLGE 140

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-----SSSNYAQQS-QPLMKIVPHSK 326
             + ++++  LE       + SPI G ++   S      SS    +     LM+      
Sbjct: 141 RNEILAEIKGLEVDLLDTQLKSPINGIVLKINSREGERPSSEGVLKVGSSQLME------ 194

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP------IISQQDNN 380
              I    +   I  ++ G    V                +++I P      +++     
Sbjct: 195 -ALIEVYES--DINRIRLGQ--NVSLISENGGFSGTLLGQVKRISPQVRQRRVLTTDPTG 249

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGF 409
                  EV + +   +     +E   G 
Sbjct: 250 DADARVVEVRITLNPNSVLK--VERYTGM 276


>gi|301615155|ref|XP_002937051.1| PREDICTED: myosin-3-like [Xenopus (Silurana) tropicalis]
          Length = 1979

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 82/229 (35%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   +R  ID   S L+ +      LEK   + E+QL +F  K 
Sbjct: 1210 QIDNLQRVKQKLEKEKS--EMRMEIDDLSSNLESVTKSKANLEKLCRTLEDQLSEFKAKS 1267

Query: 146  HSTCSKVFN-----YGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDL 199
              T   V +       + +    L  +L    S+        +  +  +  L    ++++
Sbjct: 1268 EETHRLVADLTMHKSRLQTETGELARQLEERDSLVSQLSRSKQAFTQQIEELKRLMEEEV 1327

Query: 200  TMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                 L      S++D   L +Q     ++  EL+ ++ +    +      Y+   ++  
Sbjct: 1328 KAKNALAHSLQSSRHDCDLLREQYEEEQEAKSELQRSLSKANGEVAQWRTKYETDAIQRT 1387

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1388 EELEEAKKKLAQRLQEAEEQIEAVNSKCSSLEKTKQR--LQGEVEDLMI 1434


>gi|301028356|ref|ZP_07191605.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 196-1]
 gi|299878595|gb|EFI86806.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 196-1]
          Length = 268

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 66/192 (34%), Gaps = 9/192 (4%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              LRA L+  Q + T +    ++   +     +  +       E   +I + +      
Sbjct: 7   IKTLRAQLTEAQVNTTQVSAERDRLFKNYQRYLKGSQAAVNPFSE--RDIDDARQNFLAQ 64

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           + L   +  E A    ++   +   Q       ++LT  +   EQ  I +P  G +    
Sbjct: 65  DALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLEQTVIRAPSNGYVTQVL 124

Query: 305 SFSSSNYAQ--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
                 YA     +P+M  +P  K   + A+     +  +K G  A V F        + 
Sbjct: 125 IR-PGTYAAALPLRPVMVFIPEQKRQIV-AQFRQNSLLRLKPGDDAEVVFNALP---GQV 179

Query: 363 FKAIIEKIDPII 374
           F   +  I P++
Sbjct: 180 FHGKLTSILPVV 191


>gi|298491341|ref|YP_003721518.1| RND family efflux transporter subunit MFP ['Nostoc azollae' 0708]
 gi|298233259|gb|ADI64395.1| efflux transporter, RND family, MFP subunit ['Nostoc azollae' 0708]
          Length = 437

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/156 (10%), Positives = 51/156 (32%), Gaps = 5/156 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               V ++    G + +  V +G  +  G  ++  +  +  + ++    + +  +  ++ 
Sbjct: 91  SRQSVNLQPRIQGQVTQIFVRSGDSVSDGAAIMQIDARQQQEAVNSLSAAAQIAKAQLEN 150

Query: 113 EKSALDFLNNK-----YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            ++ L  L  +      D+     +      L   G        +++  + +    L   
Sbjct: 151 TRATLQSLEAEKLGKVADLRLNQQDYNRYSELANQGAVARQTKDLYSNKLDTAKAELNAI 210

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +R+++   +    E       A +   Q  L   K
Sbjct: 211 NSRIQAQKASISQAEKSLEQADANIRQQQVQLQYYK 246



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/209 (10%), Positives = 65/209 (31%), Gaps = 24/209 (11%)

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                  ++     ++S+  + ++   ++ +       LE +     A L  +Q+D    
Sbjct: 120 AAIMQIDARQQQEAVNSLSAAAQIAKAQLENTRATLQSLEAEKLGKVADLRLNQQDYNRY 179

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             L  + AV++   +     +  +  EL       +     I++         AN  ++ 
Sbjct: 180 SELANQGAVARQTKDLYSNKLDTAKAELNAINSRIQAQKASISQAEKSLEQADANIRQQ- 238

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
                                +   +   I++P +G +         +    S  L  I 
Sbjct: 239 ---------------------QVQLQYYKIIAPFSGKVGDIPV-KIGDVVNISTKLATIT 276

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
             ++   ++  +  ++   +++G    + 
Sbjct: 277 -QNRPLDVKIPIPLEKGLRLREGLPVELM 304


>gi|218264010|ref|ZP_03477933.1| hypothetical protein PRABACTJOHN_03623 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222355|gb|EEC95005.1| hypothetical protein PRABACTJOHN_03623 [Parabacteroides johnsonii
           DSM 18315]
          Length = 367

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 3/130 (2%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
              VEI+    GII + ++  G  + +G  L   + +     ++    ++K+    + T 
Sbjct: 52  RQYVEIRPQVDGIITEIRLNEGDVVKKGQVLFVIDQVPYKAALETAIANVKSAESRLATA 111

Query: 114 KSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +      + L  +  V E   ++    L +         ++  N   +  Y  +K  +  
Sbjct: 112 RLTAESKEELFRENVVSEFDLQTARNSLAEAQATLAQARAEETNARNNLSYTEVKSPVNG 171

Query: 171 MRSIYLNRLD 180
           + S+   R+ 
Sbjct: 172 VASMIPYRVG 181



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/188 (11%), Positives = 58/188 (30%), Gaps = 25/188 (13%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS--HQKDLTMMKNLFEKNAVSQN 214
           ++++  S   K  +        L +E     L+   ++    +    ++   +   +++ 
Sbjct: 10  VAALLSSCSSKQQQEPGAKYKTLRVEFSDQTLKNGYAASLRGRQYVEIRPQVD-GIITEI 68

Query: 215 DLNQQERIVYKS----------TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            LN+ + +                 L   I   K+    +      A  +   + + +  
Sbjct: 69  RLNEGDVVKKGQVLFVIDQVPYKAALETAIANVKSAESRLATARLTAESKEELFRENVVS 128

Query: 265 D---------LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ- 314
           +         L + Q T A   ++ T          + SP+ G +     +         
Sbjct: 129 EFDLQTARNSLAEAQATLAQARAEETNARNNLSYTEVKSPVNG-VASMIPYRVGALVGSN 187

Query: 315 -SQPLMKI 321
            ++PL+ +
Sbjct: 188 ITEPLVTV 195


>gi|209964008|ref|YP_002296923.1| HlyD family secretion protein [Rhodospirillum centenum SW]
 gi|209957474|gb|ACI98110.1| HlyD family secretion protein [Rhodospirillum centenum SW]
          Length = 400

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 54/207 (26%), Gaps = 16/207 (7%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + + + +   + L+  E +  +        E   ++N   A  L                
Sbjct: 125 VLRADLMQKDAALKEAEALSAEAKANVRRAEELSKSNAVSARELDSRRATAATAAARVGV 184

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             +         +Q  I +P  GTI   ++             +  +       + A V 
Sbjct: 185 AQANREQALARLQQTEIKAPADGTI-SLRNARLGAVMSAGGTELFRLIRDDRIELAADVP 243

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              +  +  G    +          +  +  +  + P +  +             +KI  
Sbjct: 244 ELDLTGLAPGQKVLLSV---NGAAGRMHEGTVRLVAPTVDPKTRMGT--------VKIDV 292

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNTTL 422
            A  D    LR G     +    + T 
Sbjct: 293 AASPD----LRPGMFVTGMVQLGSMTA 315



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V+ G ++  G  L  F+D      +  K  ++K      +   +       + + 
Sbjct: 101 IIQVLVDEGDKVKAGQVLARFDDSVLRADLMQKDAALK----EAEALSAEAKANVRRAEE 156

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           L K+      +L        +  ++V     +      +++ T +++     + L N  
Sbjct: 157 LSKSNAVSARELDSRRATAATAAARVGVAQANREQALARLQQTEIKAPADGTISLRNAR 215


>gi|223938601|ref|ZP_03630492.1| secretion protein HlyD family protein [bacterium Ellin514]
 gi|223892720|gb|EEF59190.1| secretion protein HlyD family protein [bacterium Ellin514]
          Length = 335

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 62/195 (31%), Gaps = 17/195 (8%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +   +   V       + N+ + K   + I +L ++  +E      +    LE  + T  
Sbjct: 137 EYKARVHEVEGRLATAKANVDKAKLDYQRIKQL-NKTQIESQKAEDDARLQLESAEATLK 195

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQS--------FSSSNYAQQSQPLMKIVPHSK 326
           +      + +   +   I SPI G ++             S       S  L+  V   K
Sbjct: 196 EIQGSYELAKTYLDWTIIRSPINGVVLEKLVQPNELVVPQSFGGTRGPSTALIA-VADPK 254

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              +   +    +  +  G    V    Y D      +  + +I P  ++Q   LQ    
Sbjct: 255 DLQVEIDINEADLSKIYMGQKCRVSPEAYQDKSY---EGYVAEIAPEANRQKGTLQI--- 308

Query: 387 YEVILKITDLAFSDN 401
            +V +K  D   +  
Sbjct: 309 -KVQIKDPDKYLTPE 322



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 4/112 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  ++ SG I+     +E+   + G +    V+ G  +  G  ++T +D E    +   +
Sbjct: 88  DTILTVSGYII-NRERIELSPRYMGTVTWIGVKKGDAVTNGQIVVTLDDAEYKARVHEVE 146

Query: 101 VSIKNLRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
             +   + ++D  K     +  LN      +KA +    QL           
Sbjct: 147 GRLATAKANVDKAKLDYQRIKQLNKTQIESQKAEDDARLQLESAEATLKEIQ 198


>gi|323190700|gb|EFZ75969.1| macrolide-specific efflux protein macA [Escherichia coli RN587/1]
          Length = 371

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGRIK----DVLPTPEKINDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNA--ATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|317402321|gb|EFV82898.1| ABC-type macrolide transporter [Achromobacter xylosoxidans C54]
          Length = 394

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 72/244 (29%), Gaps = 22/244 (9%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R  L +   DLT    L    A  Q    + ER    +TL+  E    ++  +   +   
Sbjct: 87  RGQLVAEIDDLTQQNELRNTQAALQTR--RAERAAKVATLKQAELAFRRQRQMLAADASS 144

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            EA       L     D+            ++   +       I+SPI G +V       
Sbjct: 145 REAFESAEATLGVTRADIAALDAQIVQAEIEVDKAKVNLGYTRIVSPIDGVVVAV-VTKE 203

Query: 309 SNYAQQSQPLMKI--VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                  Q    I  V       I+A+++   +  VK G           D R       
Sbjct: 204 GQTVNAIQSAPTIIKVAQVATMTIKAQISEADVTRVKPGLPVYFTILGEPDHRYHATLRA 263

Query: 367 IEKIDPIISQQDNNLQTQE-----------YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +E   P   Q+D+   +             YY  +  +      + + +LR    A+V  
Sbjct: 264 VEP-APDSIQKDDAATSLTSSSSTSTSAAVYYNGLFDVP-----NPDEKLRISMTAQVSI 317

Query: 416 TAKN 419
               
Sbjct: 318 VLGE 321



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 64/176 (36%), Gaps = 27/176 (15%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL----------------LPIEISVSSSGEILN 52
           +K+      + + +  ++ II     +                    +E SV +SG +  
Sbjct: 1   MKKPRSKVQRYVLIAVVLLIIAFGVRAAFFSSPPPPTFAVAEVVRGNLEDSVLASGTMDA 60

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
            + V  + +  +G +K  +V  G ++ +G  +   +D+   + +   + +++  R     
Sbjct: 61  IERV-SVGAQATGQLKSLKVALGDRVTRGQLVAEIDDLTQQNELRNTQAALQTRRAERAA 119

Query: 113 -----EKSALDFLNNKYDVLE-----KAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                +++ L F   +  +       +AFES E  L        +  +++    I 
Sbjct: 120 KVATLKQAELAFRRQRQMLAADASSREAFESAEATLGVTRADIAALDAQIVQAEIE 175


>gi|331682387|ref|ZP_08383006.1| macrolide-specific efflux protein MacA [Escherichia coli H299]
 gi|331080018|gb|EGI51197.1| macrolide-specific efflux protein MacA [Escherichia coli H299]
          Length = 371

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 66/183 (36%), Gaps = 17/183 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNED 54
           +K+      + +  L II +  +  W IL                ++ SV ++G++    
Sbjct: 1   MKKRKTVKKRYVIALVIIIVGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALR 60

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V ++ +  SG +K   V  G ++ +   L   +  +  + I   + ++  LR      +
Sbjct: 61  KV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAE 119

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           + L      Y   ++  +++     D      +T   V    I ++   +K     + + 
Sbjct: 120 AELKLARVTYSRQQRLAQTQAVSQQDLDNA--ATEMAVKQAQIGTIDAQIKRNQASLDTA 177

Query: 175 YLN 177
             N
Sbjct: 178 KTN 180


>gi|262374204|ref|ZP_06067480.1| efflux transporter [Acinetobacter junii SH205]
 gi|262310762|gb|EEY91850.1| efflux transporter [Acinetobacter junii SH205]
          Length = 444

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 93/267 (34%), Gaps = 25/267 (9%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  +++        +L  + K   L A + S +++        +    S  +   Q  +
Sbjct: 70  SVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSIRQEND-----LKTAEASIKNQQAQLAV 124

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +  ++      Q+ M         E     ANY    ++    N +     ++ L  
Sbjct: 125 QQANLAKVEAEYKRQQAMYSQDATSRAELETALANYKTAQAQIAAINAQIEQSRLT-LAT 183

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQ 340
            ++      I++P+ GTIV             +Q    IV  +      I+A+++   + 
Sbjct: 184 AKEDLGYTRIVAPMNGTIVAI-VTEEGQTVNANQTAPTIVKLATLDTMTIKAQISEADVM 242

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVILK 392
            V+KG   TV F    +  +K + A + +++P              ++  +  YY  +  
Sbjct: 243 KVEKGQ--TVYFTTLGNSEKKHY-ATLRQVEPAPDSINTETTSTNSSSSSSAVYYNALFD 299

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +      + + +LR    A+V      
Sbjct: 300 VP-----NEDGKLRIDMTAQVYIVLAE 321



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 68/182 (37%), Gaps = 19/182 (10%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLP----------------IEISVSSSGEILNEDNVVEI 59
             K + +   + II  + W    P                IE SV ++G +     +V +
Sbjct: 13  PRKIILIALGVLIIAALGWMFFKPKAEVPQYISAEVSRGDIEDSVLATGVLEA-TKMVSV 71

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
            +  SG +KK  V+ G Q+ QG  +   + I   + +   + SIKN +  +  +++ L  
Sbjct: 72  GAQVSGQVKKMYVQLGDQVKQGQLIAQIDSIRQENDLKTAEASIKNQQAQLAVQQANLAK 131

Query: 120 LNNKYDVLEKAF--ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +  +Y   +  +  ++     L+     + T         + + +S     T    +   
Sbjct: 132 VEAEYKRQQAMYSQDATSRAELETALANYKTAQAQIAAINAQIEQSRLTLATAKEDLGYT 191

Query: 178 RL 179
           R+
Sbjct: 192 RI 193


>gi|255034794|ref|YP_003085415.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
 gi|254947550|gb|ACT92250.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
          Length = 347

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 43/111 (38%), Gaps = 1/111 (0%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS-IKNLRCHIDTEKSALDFLNN 122
            GIIK   V+ G ++ +G  L +    E    +   + + +K  R     +    D +  
Sbjct: 71  GGIIKDILVKEGDKVRRGQLLASLNTTEIAAQMGQAEENFLKAQRDARRVQNLYRDSVAT 130

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K  +          +    + K++ + +K+F+     V + L+    +++ 
Sbjct: 131 KEQLENTQSALVLAEKQLDIVKFNLSQTKIFSTADGVVMQKLQNAGEQVQG 181



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 72/218 (33%), Gaps = 22/218 (10%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L ++     + + + + +   +T E+   + + +                + + +     
Sbjct: 78  LVKEG----DKVRRGQLLASLNTTEIAAQMGQAEENFLKAQRDARRVQNLYRDSVA-TKE 132

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            LE  Q        +L I++    Q  I S   G ++     +     Q   P++ +   
Sbjct: 133 QLENTQSALVLAEKQLDIVKFNLSQTKIFSTADGVVMQKLQNA-GEQVQGGTPVLHVSST 191

Query: 325 SKL-TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           S     ++  +T K    +K G  A + F  Y      + K         ++Q  + +  
Sbjct: 192 SSTDWVVKCGLTDKDWARLKGGEQAEITFDAYPQTFIGRVK--------TLAQVSDAVSG 243

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
              Y+V + +   A       L +G  A+V    K  T
Sbjct: 244 L--YQVEIALNKPAA-----RLASGLFAKVHIYPKEQT 274


>gi|148242382|ref|YP_001227539.1| hypothetical protein SynRCC307_1283 [Synechococcus sp. RCC307]
 gi|147850692|emb|CAK28186.1| Putative outer membrane protein, efflux pump component, DevB
           homolog [Synechococcus sp. RCC307]
          Length = 307

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 89/283 (31%), Gaps = 22/283 (7%)

Query: 21  TLLSIIGIIGLITW-------------SILLPIEISVSSSGEILNEDNVVEIKSPFSGI- 66
            +L  + ++ L +W             S   P    VS+ G +    NV  + +P   + 
Sbjct: 18  AVLGTVAVVALWSWRSRPQPEPMAAPISAQSPQPRGVSALGRLNPAGNVRRLDAPSGAMG 77

Query: 67  ----IKKFQVENGSQILQGTPLLTF----EDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
               ++   VE G ++  G  L  F    + +   ++      +++  +  +  E    +
Sbjct: 78  SSPRVETLLVEEGDRVEAGQVLAQFDTRPDQLADFEVAKATIATLEQRQALLQREVQRYE 137

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L     +  +  + R+ +LL    +     +++    I      L    +        R
Sbjct: 138 RLLRSGAISAETLDVRKIKLLTVQQELRKAKAELQRQRIKLPDGELVAPFSGTVLEIFAR 197

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
                 S  + ++  S Q +  +     +   V                 EL+  +    
Sbjct: 198 PGERPGSDGVLSIGRSDQMEAVLEVYESDIGRVRVGQRVLLLSENGGFDGELQGRVRRIN 257

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +++  + L  +   +    + E+   L+        +++ L 
Sbjct: 258 PLVQQRDVLSTDPTADTDARVVEVYVTLDPADARRVRQLTGLK 300



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 51/157 (32%), Gaps = 5/157 (3%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V K+T+   E             E    +    A  L      L   Q+      ++L 
Sbjct: 113 EVAKATIATLEQRQALLQREVQRYERLLRSGAISAETLDVRKIKLLTVQQELRKAKAELQ 172

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                     +++P +GT+   + F+     +     +  +  S       +V    I  
Sbjct: 173 RQRIKLPDGELVAPFSGTV--LEIFARPG-ERPGSDGVLSIGRSDQMEAVLEVYESDIGR 229

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           V+ G    V         + + +  + +I+P++ Q+D
Sbjct: 230 VRVGQ--RVLLLSENGGFDGELQGRVRRINPLVQQRD 264


>gi|133903949|ref|NP_494821.3| abnormal DYe Filling family member (dyf-14) [Caenorhabditis elegans]
          Length = 1884

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 76/199 (38%), Gaps = 10/199 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK-------- 144
             +    ++  I++++  I T +  L    +K   L K  E    QL D L          
Sbjct: 1446 EESSRSREHEIRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHDALESKEKATGLV 1505

Query: 145  -YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +  +     +    R  ++ + + R       +L  K   L        +++T  +
Sbjct: 1506 GVQDSKHRDLEEQLDRANRERELAIGKQRRTLAENENLFRKLEQLEKEREQLMREITDER 1565

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+N  S  +L   ER    +    ++   EQ+  ++     ++E+N E  N    ++
Sbjct: 1566 RLNERNRTSLEELRVSERTWKSAMTTAKKPAEEQERAVQE-QRRWEESNHEMTNRNTALT 1624

Query: 264  RDLEQNQRTFADEMSKLTI 282
            ++ ++ +    D+++++  
Sbjct: 1625 KECDRLRVEMRDQLNRMNG 1643



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 73  ENGSQILQGTPLLTFEDIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
               + L+G       D++   L +D+ +     L+  ++TE+   D  + +        
Sbjct: 544 RETQRSLKGDVAAMKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECRAKL 603

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +   E+  +   +     + +                S     T    I     ++ENK+
Sbjct: 604 DEMAEKEAELRKELAEFQAIITAMEGEGKLNQEQFLESKNELNTLTDQIESLNSEVENKN 663

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLR 242
             +R L+++ Q+    ++N+   +        +    +     E   L E ++E+   + 
Sbjct: 664 EEIRNLMATLQEKEVHIQNVRTSSHQLTATYEEANGEIDILKAELTRLHEQVNERTRQIS 723

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             NE YD+A  +    L++++   ++       E+ ++    + +E++ 
Sbjct: 724 EANEKYDDAARKNDALLEDVAT-WQEKYEQLKMELEEMNRRGQEKEREE 771



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 68/208 (32%), Gaps = 14/208 (6%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH---------S 147
           +  +      R   + E+S  + +  + D L +   S +  +                  
Sbjct: 513 EALRSKDTEERSRFEKERSEREKIRRESDELRETQRSLKGDVAAMKTDLDDKTLRLDMLE 572

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---N 204
           T        + +       +   +        ++  K + LR  L+  Q  +T M+    
Sbjct: 573 TERDELKKKLETEREQADQRDLEIAECRAKLDEMAEKEAELRKELAEFQAIITAMEGEGK 632

Query: 205 LFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           L ++  + S+N+LN     +     E+     E +N++  + E              +++
Sbjct: 633 LNQEQFLESKNELNTLTDQIESLNSEVENKNEEIRNLMATLQEKEVHIQN-VRTSSHQLT 691

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
              E+         ++LT L +   ++T
Sbjct: 692 ATYEEANGEIDILKAELTRLHEQVNERT 719


>gi|24372113|ref|NP_716155.1| cation efflux protein, putative [Shewanella oneidensis MR-1]
 gi|24346001|gb|AAN53600.1|AE015499_11 cation efflux protein, putative [Shewanella oneidensis MR-1]
          Length = 433

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 4/158 (2%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             V K+  E      E   + R        +    A    E+ R + +  +  ++++  L
Sbjct: 160 AEVAKAQAEYINAAAEWSRVRRMSEGAVSVSRRMQAQVDAELKRAILEAIKMTSEQIRTL 219

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
               +      +L+PI G +  + +           PLM++       ++ A++TP Q  
Sbjct: 220 ESKPEAIGSYQLLAPIDGRVQQDIAM-LGQVFSAGTPLMQLT-DESHLWVEAQLTPAQAV 277

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +VK G  A ++     +    K      ++D +   + 
Sbjct: 278 NVKVGAPALIQVG--DNTLAGKIIGRSHELDSVTRTEQ 313



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 48/136 (35%), Gaps = 2/136 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDIE-TTDLIDLKKV 101
           V ++  ++ + +     +P   + ++   V  G ++ +G PLLT    E      +    
Sbjct: 113 VRATATLVVDRDKTATLAPQLDVRVQARHVVPGQEVKKGEPLLTLGGAEVAKAQAEYINA 172

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           + +  R    +E +       +  V  +   +  E +     +  +  SK    G   + 
Sbjct: 173 AAEWSRVRRMSEGAVSVSRRMQAQVDAELKRAILEAIKMTSEQIRTLESKPEAIGSYQLL 232

Query: 162 RSLKMKLTRMRSIYLN 177
             +  ++ +  ++   
Sbjct: 233 APIDGRVQQDIAMLGQ 248


>gi|330880886|gb|EGH15035.1| RND family efflux transporter MFP subunit [Pseudomonas syringae pv.
           glycinea str. race 4]
          Length = 102

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 15/103 (14%)

Query: 21  TLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNEDNVVEIKSPFSGI 66
             L +  +I +  W I+                IE SV++ G +     V ++ S  +G 
Sbjct: 1   MALCLFPVIAVCAWQIMPDSKGHAATVTVTRSNIENSVTALGTLQPRSYV-DVGSQATGQ 59

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           I K   + G Q+ +G  L+  +       +D  + +I+NL+  
Sbjct: 60  IMKIHAQVGDQVKEGDLLVEIDPSTQKARLDAARYAIENLKAQ 102


>gi|324111924|gb|EGC05904.1| HlyD family protein secretion protein [Escherichia fergusonii B253]
          Length = 378

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 94/294 (31%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +   +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVSEVTDKNNQLIHKGDVLFKLDPVRYQARVTRLQADLMTATHNIKTLRAQLA 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAVANTSQVSAERDRLYKNYQRYLKGSQAVVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E        + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMINGEQSQIVSLRAQLAEAEYNLAQTVVRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    ++        + L       +   IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLESGDEAEVVFNALPGQVFRGKLTQIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +        + P  ++  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLALIDLEPNAEVDALPDGIYAQV 347


>gi|300935729|ref|ZP_07150696.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           21-1]
 gi|300459079|gb|EFK22572.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           21-1]
          Length = 371

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|289669983|ref|ZP_06491058.1| membrane fusion protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 414

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/135 (10%), Positives = 44/135 (32%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +     G +     + G ++ +G  L   +        D    + 
Sbjct: 64  ASALGTVT-ALNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAK 122

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +      N+      V     +++  Q+  +     +  +++ +  +   
Sbjct: 123 RQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVAANDAQMRSAQVQLQ 182

Query: 161 YRSLKMKLTRMRSIY 175
           +  +   +  +  I 
Sbjct: 183 FTRVTAPIDGIAGIR 197


>gi|121634301|ref|YP_974546.1| putative secretion protein [Neisseria meningitidis FAM18]
 gi|120866007|emb|CAM09744.1| Putative secretion protein [Neisseria meningitidis FAM18]
          Length = 258

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 74/223 (33%), Gaps = 4/223 (1%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S    T  + I  + +I + I        ++ G+IL    V+ + +P +G I    
Sbjct: 28  TRPLSFSLWTTFASISALLIILFLIFGNYTRKTTAEGQILPASGVIRVYAPDTGTITAKF 87

Query: 72  VENGSQILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           VE+G ++  G  L             +    K      +   + E   L  ++       
Sbjct: 88  VEDGEKVKAGDKLFALSTSRFGAGGSVQQQLKTEAVLKKTLAEQELGRLKLIHGNETRSL 147

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL-KMKLTRMRSIYLNRLDLENKSSL 187
           KA   R E     + +      +      S    +L + +L+ +  +  +         L
Sbjct: 148 KATVERLENQKLHISQQIDGQKRRIRLAESVAKTALGRQELSGLGMVSSDLAKSNEPVYL 207

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           ++             +   +     + D+  ++R +Y+  LEL
Sbjct: 208 VKIKPDKPTITAYGEEKPLQIGMTLEADILHEKRRLYEWVLEL 250


>gi|121997068|ref|YP_001001855.1| RND family efflux transporter MFP subunit [Halorhodospira halophila
           SL1]
 gi|121588473|gb|ABM61053.1| efflux transporter, RND family, MFP subunit [Halorhodospira
           halophila SL1]
          Length = 412

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 79/244 (32%), Gaps = 16/244 (6%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +      +G  +  G  L+  +D E  D++  ++  +  L   +  E+ A++      + 
Sbjct: 69  VVDVPARDGRVVEAGELLVRLDDGELRDILRQRQADLDELEAALRQERRAVEADREDLEA 128

Query: 127 LEK--AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL--- 181
            E   A + R    L+ L   ++      +    S  R  +  +   +S+      L   
Sbjct: 129 EEALLAIDQRRVARLEELVADNAASPSELDDAEESKERQRQAVIRARQSVDDAEERLAVA 188

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDL---------NQQERIVYKSTLELR 231
           E +     A     ++D+   +        VS   +         N+   +     LE+R
Sbjct: 189 EARRDGAEAARDQARRDVGRTEVRAPFDGRVSAVPVGRGDRVSPGNELVGLYDTGELEVR 248

Query: 232 ENIHEQK-NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             I   +   L            E     +E+  +L++     A E   +  +    ++ 
Sbjct: 249 VQIPTTRIGALYRARAADTAVRGEARVDGRELDLELDRLAGQTARERGGVEAIFTVADRH 308

Query: 291 TILS 294
             ++
Sbjct: 309 EDVA 312



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 67/222 (30%), Gaps = 29/222 (13%)

Query: 129 KAFESREEQLLDFLGKYHS-TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            A + R  +  + L +        +     + +           R++  +R DLE +   
Sbjct: 73  PARDGRVVEAGELLVRLDDGELRDILRQRQADLDELEAALRQERRAVEADREDLEAE--- 129

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             ALL+  Q+ +  ++ L   NA S ++L+  E                         E 
Sbjct: 130 -EALLAIDQRRVARLEELVADNAASPSELDDAE----------------------ESKER 166

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +A +     + +    L   +       +      +   +  + +P  G +       
Sbjct: 167 QRQAVIRARQSVDDAEERLAVAEARRDGAEAARDQARRDVGRTEVRAPFDGRVSAVPV-G 225

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             +       L+ +   +    +R ++   +I  + +   A 
Sbjct: 226 RGDRVSPGNELVGLY-DTGELEVRVQIPTTRIGALYRARAAD 266


>gi|325970633|ref|YP_004246824.1| efflux transporter RND family, MFP subunit [Spirochaeta sp. Buddy]
 gi|324025871|gb|ADY12630.1| efflux transporter, RND family, MFP subunit [Spirochaeta sp. Buddy]
          Length = 373

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 71/217 (32%), Gaps = 31/217 (14%)

Query: 1   MHHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSI--------LLPIEISVSS------ 46
           + + + K L+R     L    ++  + + GL  ++            ++  VSS      
Sbjct: 14  VRNQLRKKLRRQRTKRLITTFVILALIVFGLYVYTFYKENNRFPWAEVKEQVSSVKEVEA 73

Query: 47  -------------SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
                        SG +   +    I       +    V+ G Q+ +G  L+  ++    
Sbjct: 74  KVYENVFSTTIDLSGYVEPIEIQKVILRAAGA-VTDVFVKEGDQVKKGDVLIALDNTSQL 132

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +   +  ++ ++      +  L  L  K  +    +          + + + +    F
Sbjct: 133 YEVANLQAELERIQLTGSERELELTELRLKSAMNRLDYTKAIANFDGVVAEVNVSVGDYF 192

Query: 154 NYGISS---VYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           + G S+   + RS       +  I +  + L  K++L
Sbjct: 193 DAGSSAMTIIDRSRLKATVEIDEIDMQYVKLGQKATL 229


>gi|167584683|ref|ZP_02377071.1| secretion protein HlyD family protein [Burkholderia ubonensis Bu]
          Length = 203

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 4/101 (3%)

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 ++  +  +  ++ TI++P+ GTI   +S           PLM +V      +I 
Sbjct: 11  AVVQAAAQFKLAYRNLKRTTIVAPVDGTI-GQRSVQVGQQVGPGVPLMSVV-QLNRLWID 68

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           A     QI+H++ G    +    Y       ++  ++    
Sbjct: 69  ANFKEGQIRHMRVGQPVEIVSDLYGSRI--VYRGRVQGFSA 107


>gi|110641079|ref|YP_668809.1| macrolide transporter subunit MacA [Escherichia coli 536]
 gi|161486265|ref|NP_752944.2| macrolide transporter subunit MacA [Escherichia coli CFT073]
 gi|218688660|ref|YP_002396872.1| macrolide transporter subunit MacA [Escherichia coli ED1a]
 gi|227884156|ref|ZP_04001961.1| Acr family acridine efflux pump AcrA [Escherichia coli 83972]
 gi|300978663|ref|ZP_07174353.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           45-1]
 gi|300991783|ref|ZP_07179646.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           200-1]
 gi|301051193|ref|ZP_07198022.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           185-1]
 gi|306812672|ref|ZP_07446865.1| macrolide transporter subunit MacA [Escherichia coli NC101]
 gi|331646146|ref|ZP_08347249.1| macrolide-specific efflux protein MacA [Escherichia coli M605]
 gi|110342671|gb|ABG68908.1| macrolide-specific efflux protein MacA precursor [Escherichia coli
           536]
 gi|218426224|emb|CAR07049.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli ED1a]
 gi|222032607|emb|CAP75346.1| Macrolide-specific efflux protein macA [Escherichia coli LF82]
 gi|227838908|gb|EEJ49374.1| Acr family acridine efflux pump AcrA [Escherichia coli 83972]
 gi|281178013|dbj|BAI54343.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|300297100|gb|EFJ53485.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           185-1]
 gi|300305537|gb|EFJ60057.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           200-1]
 gi|300409595|gb|EFJ93133.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           45-1]
 gi|305853435|gb|EFM53874.1| macrolide transporter subunit MacA [Escherichia coli NC101]
 gi|307552721|gb|ADN45496.1| macrolide-specific efflux protein MacA [Escherichia coli ABU 83972]
 gi|312945396|gb|ADR26223.1| macrolide transporter subunit MacA [Escherichia coli O83:H1 str.
           NRG 857C]
 gi|315294560|gb|EFU53908.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           153-1]
 gi|315296721|gb|EFU56013.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           16-3]
 gi|320196627|gb|EFW71250.1| Macrolide-specific efflux protein MacA [Escherichia coli WV_060327]
 gi|324009754|gb|EGB78973.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           57-2]
 gi|324013014|gb|EGB82233.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           60-1]
 gi|331044898|gb|EGI17025.1| macrolide-specific efflux protein MacA [Escherichia coli M605]
          Length = 371

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKINDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNA--ATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|120552961|ref|YP_957312.1| secretion protein HlyD family protein [Marinobacter aquaeolei VT8]
 gi|120322810|gb|ABM17125.1| secretion protein HlyD family protein [Marinobacter aquaeolei VT8]
          Length = 332

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/298 (11%), Positives = 77/298 (25%), Gaps = 39/298 (13%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +      R E      G        +       +  SL      +     +R   E   +
Sbjct: 54  IATRIPGRLESFEVREGDMVEAGMLLAVMDTDELEASLAAAQASLHQAEQSRRLAEAVVA 113

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              +     Q +L  +++L ++   SQ  L++       +   L+    +  +    I  
Sbjct: 114 QRESERRYAQAELARIESLADRGHASQEQLDRARTAAETAEAALQAARVQVASADASIEA 173

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
               A     N                              +   + +P+ G ++Y +  
Sbjct: 174 AKASARRIQTN-----------------------------IDDSQLTTPVGGRVLY-RLA 203

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      +  ++      Y+   +   Q   V+ G  A +      D       A 
Sbjct: 204 EPGEVLAAGGKVATVL-DVTDVYMTIFLPTAQAGKVRVGSEARIVLDALPDY---VVPAE 259

Query: 367 IEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  +         S +  + + +  + V ++I           ++ G P E       
Sbjct: 260 VSFVAAEAQFTPKSVETRSEREKLMFRVRIRIDPELLKAYRDRVKTGVPGEAYVRLDE 317



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 63/186 (33%), Gaps = 14/186 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISV--SSSGEILNEDNVVEIKSPFSGIIK 68
           ++   + K   ++ I+ +I +  W ++   +       SG    E   V+I +   G ++
Sbjct: 4   KSTNTAPKLFIVVLIVALIAVAAWYLMPKGDQVPAHIGSGNGRIEATEVDIATRIPGRLE 63

Query: 69  KFQVENGSQILQGTPLLTFEDIETTD----------LIDLKKVSIKNLRCHIDTEKSALD 118
            F+V  G  +  G  L   +  E               +  +   + +    ++E+    
Sbjct: 64  SFEVREGDMVEAGMLLAVMDTDELEASLAAAQASLHQAEQSRRLAEAVVAQRESERRYAQ 123

Query: 119 FLNNKYDVLEKAFESREEQL--LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
               + + L     + +EQL       +      +     ++S   S++      R I  
Sbjct: 124 AELARIESLADRGHASQEQLDRARTAAETAEAALQAARVQVASADASIEAAKASARRIQT 183

Query: 177 NRLDLE 182
           N  D +
Sbjct: 184 NIDDSQ 189


>gi|330993899|ref|ZP_08317830.1| Multidrug resistance protein A-like protein [Gluconacetobacter sp.
           SXCC-1]
 gi|329759030|gb|EGG75543.1| Multidrug resistance protein A-like protein [Gluconacetobacter sp.
           SXCC-1]
          Length = 368

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 49/374 (13%), Positives = 103/374 (27%), Gaps = 77/374 (20%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               V +     G + +  V +   + QG  L   +D       D    ++   R     
Sbjct: 64  AGRAVAVAPHVGGYVTELLVNDNQFVHQGDILARIDDRNWRAQRDQAAAAVDIARAQ--- 120

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  +NN   + E A ++    L+   G+  +  ++ F        +     +TR  
Sbjct: 121 -------VNNYALLAEVAKKNFPGHLMVAQGQLQAAQAQQFRAETDYRRQ---HGVTREA 170

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +   N           +A +   Q +L     +    A ++  + +Q+  + ++   LRE
Sbjct: 171 TSQQNIDYATAALDAAKAQVLEAQGNLETALPVIPNIASTEARVTEQQATLTQAEARLRE 230

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                                                              E   E   I
Sbjct: 231 --------------------------------------------------AELNVEWTLI 240

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G I   ++          Q +  IV      ++ A     Q+ H++ G    +  
Sbjct: 241 RAPHDGWISQ-RNIERGTLVTAGQTVFSIV--EPEIWVVANYKETQLTHMRPGQKVDIAI 297

Query: 353 PHYADIREKKFKAIIEKI----DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE---- 404
             Y  ++    K  ++ +        S       T  Y +++ ++      D  +     
Sbjct: 298 DAYPFLK---LKGHVDSLQLGTGATFSAFPPENATGNYVKIVQRVPVKILIDEGLRQDLP 354

Query: 405 LRNGFPAEVLFTAK 418
           L  G   E     +
Sbjct: 355 LALGLSVEPTVHTE 368


>gi|238759459|ref|ZP_04620623.1| HlyD family secretion protein [Yersinia aldovae ATCC 35236]
 gi|238702356|gb|EEP94909.1| HlyD family secretion protein [Yersinia aldovae ATCC 35236]
          Length = 389

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 86/266 (32%), Gaps = 37/266 (13%)

Query: 182 ENKSSLLRALLSSHQKDLTMM--KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE--Q 237
             K   + A +S   K L +   + + +   V++ D   Q+  +  +   L+  + +   
Sbjct: 47  AQKQVTVGAQVSGQIKALHVTLGQPVAKDQLVAEIDDLTQQNALKDAQEALKNVLAQRAA 106

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ-------- 289
           K   +  N+L  +   +       +  D +  + T     +++  L+    Q        
Sbjct: 107 KEATQKNNQLTYQRQQQILAKGLGVRADFDSARATLESTQAEINALDAQIAQAEIAVSTA 166

Query: 290 ------KTILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                   I SPIAGT+V             Q +  ++K V       I A+++   +  
Sbjct: 167 KLNLGYTKISSPIAGTVVAIPVEEGQTVNAVQSAPTIIK-VARLDTMTIEAQISEADVVK 225

Query: 342 VKKGYTATVRFPHYADIREK-KFKAIIEKIDPIISQQDNNLQTQE----------YYEVI 390
           VK G         Y   R     +AI    D I  +      +            YY  +
Sbjct: 226 VKTGMPVYFTILGYPAERFSATLRAIEPAPDSINDETTTTSSSSSTSSASTTTAIYYNGL 285

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFT 416
             +     ++ N  LR    A+V   
Sbjct: 286 FDV-----ANPNGVLRISMTAQVYIV 306



 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 55/144 (38%), Gaps = 11/144 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V + G I  +  V  + +  SG IK   V  G  + +   +   +D+   + +   
Sbjct: 35  LEQTVLADGTIKAQKQV-TVGAQVSGQIKALHVTLGQPVAKDQLVAEIDDLTQQNALKDA 93

Query: 100 KVSIKNLRCHIDTEKS----------ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           + ++KN+      +++              +  K   +   F+S    L     + ++  
Sbjct: 94  QEALKNVLAQRAAKEATQKNNQLTYQRQQQILAKGLGVRADFDSARATLESTQAEINALD 153

Query: 150 SKVFNYGISSVYRSLKMKLTRMRS 173
           +++    I+     L +  T++ S
Sbjct: 154 AQIAQAEIAVSTAKLNLGYTKISS 177


>gi|269791649|ref|YP_003316553.1| efflux transporter, RND family, MFP subunit [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099284|gb|ACZ18271.1| efflux transporter, RND family, MFP subunit [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 392

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 45/129 (34%), Gaps = 15/129 (11%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN------------LRCHIDT 112
           G I +  V  G ++ +G PL   +++   +   + +  +              +R   + 
Sbjct: 75  GTILEVYVREGDRVRRGQPLFRTDNVRQEEAYRIAQRDVDAASFAVEERTHAVIRARAEL 134

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E+  LD    +  + E A     + + D +   +     ++    S +  +         
Sbjct: 135 ERVELDLKRFRELLDEGAIS---QSMFDDVSTRYRQAKAMYASAQSMLNSAQASLRKAQG 191

Query: 173 SIYLNRLDL 181
           ++ + R +L
Sbjct: 192 ALNIARKNL 200



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 81/267 (30%), Gaps = 54/267 (20%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLL---RALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           R  +      R +      +E ++  +   RA L   + DL   + L ++ A+SQ     
Sbjct: 101 RQEEAYRIAQRDVDAASFAVEERTHAVIRARAELERVELDLKRFRELLDEGAISQ----- 155

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                               +M   ++  Y +A   +A+        L   Q +      
Sbjct: 156 --------------------SMFDDVSTRYRQAKAMYASAQS----MLNSAQASLRKAQG 191

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR--AKVTP 336
            L I  K     T++SP+ G +   +        +   P+++I      + +   A +  
Sbjct: 192 ALNIARKNLSDTTVVSPMDGMVSR-RLMEPGEMGRAGVPVLRI---DDPSQVEVLAYLPS 247

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           +    V  G T   R               ++   P++     +      +EV       
Sbjct: 248 EMYPKVVPGVT---RVELLDSSGAPVEVLTVKIKSPVVDPTSRS------FEVR------ 292

Query: 397 AFSDNNIELRNGFPAEV-LFTAKNTTL 422
             ++       G  AE+      + +L
Sbjct: 293 CLAEGGPSKVPGAMAELRFLLGSSRSL 319


>gi|206602552|gb|EDZ39033.1| Putative heavy metal efflux protein, CzcB [Leptospirillum sp. Group
           II '5-way CG']
          Length = 419

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 69/211 (32%), Gaps = 36/211 (17%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           EL  +  E    L+ +N+       E    + + ++D          E+++L    K+R 
Sbjct: 164 ELASSEAEAIIALQSLNKNPS---WEDNQKIWDAAKDRLHLLGVADSEINRLKQTGKSRS 220

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              + SP +G +    +          + LM +       ++    T  ++  VK G T 
Sbjct: 221 VIPVYSPYSGVVTSISA-QVGGAISPEKSLMTLA-DPTRVWVDVFFTSPELAWVKDGDTV 278

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           T+  P+ A  R    K  +  I+P + +    +         + +      + +  L+ G
Sbjct: 279 TLHLPYLASRRY---KGRLRFINPEVEKTSRTI------RARVVV-----QNPDGVLKAG 324

Query: 409 F-----------------PAEVLFTAKNTTL 422
                             P E L      T+
Sbjct: 325 MYLEAVLHPDPHPNALVIPREALIRTGKKTV 355


>gi|2072423|gb|AAC51257.1| huntingtin interacting protein 1 [Homo sapiens]
 gi|119592174|gb|EAW71768.1| huntingtin interacting protein 1, isoform CRA_b [Homo sapiens]
          Length = 914

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 5/192 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           LI+     I  L+  ++  K+    +  +        E+   +      +    C +   
Sbjct: 253 LIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDC-EFLR 311

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +  + R  +      RS+       +        L   + + +    +L  KNA    
Sbjct: 312 AELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNA---- 367

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ +Q  +  ++ ++L     E ++ L  I++       E    L+ + ++L  +QR   
Sbjct: 368 EVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQ 427

Query: 275 DEMSKLTILEKT 286
                L    ++
Sbjct: 428 VLQGSLETSAQS 439


>gi|120598550|ref|YP_963124.1| RND family efflux transporter MFP subunit [Shewanella sp. W3-18-1]
 gi|146293371|ref|YP_001183795.1| RND family efflux transporter MFP subunit [Shewanella putrefaciens
           CN-32]
 gi|120558643|gb|ABM24570.1| efflux transporter, RND family, MFP subunit [Shewanella sp.
           W3-18-1]
 gi|145565061|gb|ABP75996.1| efflux transporter, RND family, MFP subunit [Shewanella
           putrefaciens CN-32]
 gi|319426673|gb|ADV54747.1| efflux transporter, RND family, MFP subunit [Shewanella
           putrefaciens 200]
          Length = 354

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 78/205 (38%), Gaps = 16/205 (7%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E   V + D  ++ +++     + ++   ++      I E       + +N     + 
Sbjct: 73  LIESITVEEGDRVRKGQVLAVIDAKRQQYDLDRSEAEVKIIEQELNRLNKMSNKEFISAD 132

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L + +      ++K  + E   ++  ++SPI G I   +   + N A++   L  IV +
Sbjct: 133 SLAKLEYNLQAAIAKKDLAELQVKESRVISPIDGVIAK-RYVKAGNMAKEFGDLFYIV-N 190

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
               +    +  +Q+  +K G  A + F        +   A + +I PI+  Q       
Sbjct: 191 QDELHGIVHLPEQQLTSLKLGQEAQI-FS--NQQSNQTIDAKVLRISPIVDPQSGT---- 243

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
             ++V L +      + N  L+ G 
Sbjct: 244 --FKVTLAVP-----NENARLKAGM 261



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 4/109 (3%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S  SG+I+   VE G ++ +G  L   +       +D  +  +K     I+ E + L+
Sbjct: 66  VVSRISGLIESITVEEGDRVRKGQVLAVIDAKRQQYDLDRSEAEVKI----IEQELNRLN 121

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            ++NK  +   +    E  L   + K      +V    + S    +  K
Sbjct: 122 KMSNKEFISADSLAKLEYNLQAAIAKKDLAELQVKESRVISPIDGVIAK 170


>gi|331656950|ref|ZP_08357912.1| macrolide-specific efflux protein MacA [Escherichia coli TA206]
 gi|331055198|gb|EGI27207.1| macrolide-specific efflux protein MacA [Escherichia coli TA206]
          Length = 268

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 8   LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRN 67

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 68  QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 126

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 127 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKINDAIFYYARFEVP 179

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 180 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 218


>gi|320194007|gb|EFW68640.1| Putative membrane protein [Escherichia coli WV_060327]
          Length = 355

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|315046198|ref|XP_003172474.1| hypothetical protein MGYG_05066 [Arthroderma gypseum CBS 118893]
 gi|311342860|gb|EFR02063.1| hypothetical protein MGYG_05066 [Arthroderma gypseum CBS 118893]
          Length = 1419

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 71/215 (33%), Gaps = 13/215 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              + I+       +    + +R  ++ EKS    L  + + LE  F+  + +      ++
Sbjct: 812  EVDQIQKEIEAAREAHEREIIRLRMEAEKSEEKALAEQKERLEDLFQEIKNEDDRLAAEH 871

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                       +++    L      ++S        + +    +A L+    +L  +K  
Sbjct: 872  LKAREDELLGQLAAKQEELDANEAALKSTMEELRVTQEELEGKKAELAEKFSELEALKEE 931

Query: 206  FEKNAVSQNDLNQQERIVYKSTLEL------------RENIHEQKNMLRHINELYDEANL 253
               N  S+ +  QQE    ++ LEL             E I   ++ L        E   
Sbjct: 932  LA-NTKSELEAKQQECESRQNELELTRKDLEETKRHHEEEIASLRDALEIQTNSVKEIKE 990

Query: 254  EFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
              AN + E     E  Q+      ++L+   +  +
Sbjct: 991  RLANMVLEHRSQEETWQKAREGYEAQLSEKTEELK 1025


>gi|261246159|emb|CBG23962.1| putative exported protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
          Length = 372

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  +      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RALLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKINDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 63/174 (36%), Gaps = 25/174 (14%)

Query: 18  KRMTLLSIIGIIGLITW-SILLPI-------------EISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+  W  I  P+             E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMAGWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G  + +   L   +  +  + I   + ++  L        + L      
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNAERQQAAAELK----- 124

Query: 124 YDVLEKAFESREEQLLDFLG--KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
              L +   +R++QL       +     +        +   ++  ++ R R++ 
Sbjct: 125 ---LARVTLARQQQLAKTQAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRALL 175


>gi|157145905|ref|YP_001453224.1| hypothetical protein CKO_01656 [Citrobacter koseri ATCC BAA-895]
 gi|157083110|gb|ABV12788.1| hypothetical protein CKO_01656 [Citrobacter koseri ATCC BAA-895]
          Length = 289

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 63/183 (34%), Gaps = 15/183 (8%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           N+ +   V+  DL            EL     E       + +  +EAN         IS
Sbjct: 62  NIKDNQFVNAGDLLFSIDKTPFHIAELNAQ-AELAKARSDLAKANNEANRRRHLSQNYIS 120

Query: 264 RD--------LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
            +        ++  Q +     + L   +    Q  + +P+AG +    + +  +YA   
Sbjct: 121 AEDMDTANLNVKAMQASVEAAEASLKQAQWQLAQTDVRAPVAGWVTNLSTRT-GDYASTG 179

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           QPL  +V  S   Y+       +++H+++G  A +           K +  +  I   I 
Sbjct: 180 QPLFALV-DSHSFYVMGYFEETKLRHIREGAPAQITL----YSGNVKLQGHVSSIGRAIY 234

Query: 376 QQD 378
            Q 
Sbjct: 235 DQS 237



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/178 (10%), Positives = 51/178 (28%), Gaps = 13/178 (7%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + + +I  + G   W+  +      +  G++  E   V I    SG I 
Sbjct: 4   MSLKTMKYFSTIVVAAIAVLAGWWLWNYYMQ--SPWTRDGKVRAEQ--VSITPQVSGSIT 59

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           +  +++   +  G  L + +       E     +L K      + + +  +      N  
Sbjct: 60  ELNIKDNQFVNAGDLLFSIDKTPFHIAELNAQAELAKARSDLAKANNEANRRRHLSQNYI 119

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                D      ++ +  +            ++    + +        L+     Y +
Sbjct: 120 SAEDMDTANLNVKAMQASVEAAEASLKQAQWQLAQTDVRAPVAGWVTNLSTRTGDYAS 177


>gi|146100865|ref|XP_001468966.1| hypothetical protein [Leishmania infantum]
          Length = 918

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/234 (9%), Positives = 77/234 (32%), Gaps = 7/234 (2%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKK--VSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +    +     L   +    T     +    +++ LR  +  +++ +  L       ++ 
Sbjct: 480 QEAEVVALRQLLAEAQREAQTAGARQRDSGAAVQALRDQMAEQEAEVVALRQLLAEAQRE 539

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            ++   +  D      +   ++        ++ + L       ++    + D       L
Sbjct: 540 AQAAGARQRDSGAAVQALRDQMAEQEAEMVALRQLLAEAQREAQAAGARQRDSGAAVQAL 599

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN---MLRHIN 245
           R  ++  + ++  ++ L  +          ++R    +   LR+ + EQ+     LR + 
Sbjct: 600 RDQMAEQEAEMVALRQLLAEAQREAQAAGARQRDSGAAVQALRDQMAEQEAEVVALRQLL 659

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                         ++    ++  +   A++ +++  L +   +    +P+ G 
Sbjct: 660 AEAQREAQAAGARQRDSGAAVQALRDQMAEQEAEMVALRQLLAEAQREAPVDGV 713



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/225 (8%), Positives = 67/225 (29%), Gaps = 14/225 (6%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           ++   +   +  +      +   +  L     +              +     +     +
Sbjct: 633 DSGAAVQALRDQMAEQEAEVVALRQLLAEAQREAQAAGARQRDSGAAVQALRDQMAEQEA 692

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++            +  +  +RS+     D       LR  ++  + ++  ++ L  +  
Sbjct: 693 EMVALRQLLAEAQREAPVDGVRSL-----DSGAAVQALRDQMAEQEAEMVALRQLLAEAQ 747

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---ANYLKEISRDLE 267
                   ++R    +   LR+ + EQ+  +  + +L  EA  E         +    ++
Sbjct: 748 REAQAAGARQRDSGAAVQALRDQMAEQEAEMVALRQLLAEAQREAPVDGVRSLDSGAAVQ 807

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
             +   A++ +++  L +   +    +  AG      +       
Sbjct: 808 ALRDQMAEQEAEMVALRQLLAEAQREAQTAG------ARQRGGVI 846


>gi|53803683|ref|YP_114681.1| heavy metal efflux pump membrane fusion protein [Methylococcus
           capsulatus str. Bath]
 gi|53757444|gb|AAU91735.1| putative heavy metal efflux pump membrane fusion protein
           [Methylococcus capsulatus str. Bath]
          Length = 422

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 21/254 (8%)

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           +   +RS    R  L +    L  ++   ++ +  +   FE   + + D+N   + V   
Sbjct: 96  QKLGVRSEPARRRALTHVIRAL-GVVEIDERRVHAITPRFE-GWIERLDVNTTGQPVRPG 153

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            + L     E  +           A       L+E +    +N       + +     + 
Sbjct: 154 EVLLEAYSPELVSTQEEYRIAGSGAASR---ALREGAIQRLRNWNVPESWLRRFEASGEI 210

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
           + +    SP+ G ++   +            L + V      ++ A +  + + HV+ G 
Sbjct: 211 QRRVPFASPVNGIVLEKNAV-QGMRFMPGDTLFR-VADLSTVWVIASIFEQDLGHVRVGQ 268

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TA + F  Y D     F   +  + P ++               ++I     ++    L+
Sbjct: 269 TARIGFKAYPDR---SFDGRVAYVYPTVTDAVRT--------ARVRI---ELANPKQLLK 314

Query: 407 NGFPAEVLFTAKNT 420
                +V   A  T
Sbjct: 315 PAMYGDVTLQAAET 328


>gi|328876174|gb|EGG24537.1| hypothetical protein DFA_02780 [Dictyostelium fasciculatum]
          Length = 1687

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 71/205 (34%), Gaps = 7/205 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
              D  + K+++ +  +  +  E++    L ++ +  ++A   R  +  +          
Sbjct: 346 RLADEAEKKRLADEQEKARLAAEEAERKRLADESERQKEAERKRLAEEAEKKRLADEQEK 405

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK-----DLTMMKNL 205
                  +   R  +    +  +    +  LE + +  + L    +K     +    K L
Sbjct: 406 VRLAAEETERKRLAEEAEKKRLADEQEKKRLEAEEAERKRLADEAEKTRLAAEEAERKRL 465

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            E++   + +  + ER       E +    E +   + + E   E         K+   D
Sbjct: 466 AEESERQRLEAEEAERKRLADEAEKKRLADEAEK--KRLAEEEAERKRLADEAEKKRLAD 523

Query: 266 LEQNQRTFADEMSKLTILEKTREQK 290
            ++  R  A+E  +  + ++  +++
Sbjct: 524 EQEKTRLAAEESERKRLADEAEKKR 548


>gi|312971005|ref|ZP_07785184.1| macrolide-specific efflux protein macA [Escherichia coli 1827-70]
 gi|310336766|gb|EFQ01933.1| macrolide-specific efflux protein macA [Escherichia coli 1827-70]
 gi|323172151|gb|EFZ57789.1| macrolide-specific efflux protein macA [Escherichia coli LT-68]
 gi|323185157|gb|EFZ70522.1| macrolide-specific efflux protein macA [Escherichia coli 1357]
 gi|323947164|gb|EGB43174.1| macA protein [Escherichia coli H120]
          Length = 263

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 3   LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 62

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 63  QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 121

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 122 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 174

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 175 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 213


>gi|300902414|ref|ZP_07120396.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           84-1]
 gi|301305348|ref|ZP_07211443.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           124-1]
 gi|300405446|gb|EFJ88984.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           84-1]
 gi|300839366|gb|EFK67126.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           124-1]
 gi|315257916|gb|EFU37884.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           85-1]
          Length = 371

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQELDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++   ++ + +        +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRL--AQTQAVSQQELDTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|218704307|ref|YP_002411826.1| macrolide transporter subunit MacA [Escherichia coli UMN026]
 gi|298379967|ref|ZP_06989572.1| HlyD family secretion protein [Escherichia coli FVEC1302]
 gi|300895699|ref|ZP_07114295.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           198-1]
 gi|218431404|emb|CAR12282.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli UMN026]
 gi|298279665|gb|EFI21173.1| HlyD family secretion protein [Escherichia coli FVEC1302]
 gi|300360368|gb|EFJ76238.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           198-1]
          Length = 371

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLATAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLATAKTN 180


>gi|254436934|ref|ZP_05050428.1| efflux transporter, RND family, MFP subunit [Octadecabacter
           antarcticus 307]
 gi|198252380|gb|EDY76694.1| efflux transporter, RND family, MFP subunit [Octadecabacter
           antarcticus 307]
          Length = 386

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 82/255 (32%), Gaps = 25/255 (9%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYKST 227
           T            E ++   R  +   +    +++ L +K   V   D+  +      + 
Sbjct: 77  TSQAETVTQFYQAEGQALPDRDTMMRAETSGEILQVLVQKGQDVIAGDVIAR---FDPTN 133

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            E   N   ++           EA LE      +    + Q + T A   +++T +++  
Sbjct: 134 NEADANRAAEELAQAQREFDNAEALLERGVATAD---RVSQARATLASAQAEVTAVQQDA 190

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
              TI +P AG I          +   S  + ++V       +  +V  + +  +  G  
Sbjct: 191 VALTITAPFAGRIETLDLD-EGEFVSISTEIGRLV-DITPLTVAIQVPQQSLTRLSIGQP 248

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           AT+ F     I  ++    +  +    + +               + ++  ++    +  
Sbjct: 249 ATIGF-----ITGEERVGTVTFVGTSAASETRTF-----------LAEIEVANAGGVIPG 292

Query: 408 GFPAEVLFTAKNTTL 422
           G  AEV+      T 
Sbjct: 293 GISAEVIIPTGEVTA 307



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 59/197 (29%), Gaps = 31/197 (15%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILL------------------PIEISVS----------- 45
               R T ++   +I ++ W                      P+ ++V+           
Sbjct: 28  KGASRSTWIAGFLVIAIVGWMGSGFIIPSAEATPVTVRETPKPVAVAVTTSQAETVTQFY 87

Query: 46  -SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            + G+ L + +   +++  SG I +  V+ G  ++ G  +  F+        +     + 
Sbjct: 88  QAEGQALPDRDT-MMRAETSGEILQVLVQKGQDVIAGDVIARFDPTNNEADANRAAEELA 146

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +   D  ++ L+      D + +A  +      +         +       +    +L
Sbjct: 147 QAQREFDNAEALLERGVATADRVSQARATLASAQAEVTAVQQDAVALTITAPFAGRIETL 206

Query: 165 KMKLTRMRSIYLNRLDL 181
            +      SI      L
Sbjct: 207 DLDEGEFVSISTEIGRL 223


>gi|167576571|ref|ZP_02369445.1| possible FusE-MFP/HlyD family membrane fusion protein [Burkholderia
           thailandensis TXDOH]
          Length = 299

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/218 (11%), Positives = 66/218 (30%), Gaps = 26/218 (11%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +  +  +L     E    +R         ++      ++ +  +E+ +   A   +   
Sbjct: 85  ALEHAQADLASQQAELDEAVREDRRNRALPDVVATESTEQGATRVEKLRAAVAQARAARD 144

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +     E+  + +P+ GT+          Y    +  M +V + +   +       ++  
Sbjct: 145 LAALNLERTRVRAPVDGTVTNVGLL-PGVYLSAGKGAMALV-NDRSLRVEGYFEETKLPA 202

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY-------------- 387
           +  G  A+V    Y      + +  ++ I   +  ++      +                
Sbjct: 203 IHVGDPASV----YLMGIASEIRGHVQSIAGGVEDRERAGGAAQLANVNPAFTWVRLAQR 258

Query: 388 -EVILKITDLAFSDNNIELRNGFPAEVLF--TAKNTTL 422
             V + I  +      + L  G  A V     A + T+
Sbjct: 259 IPVRVAIDSV---PPGLRLVPGQTASVEIHARAGDVTV 293



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 58/158 (36%), Gaps = 6/158 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILL--PIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +KR  P     +T   ++ I+G I +++     IE      G++  +  VV I     G+
Sbjct: 1   MKRTIPLLRTCLTAAILVTILGAI-YALWTRYQIEPLTR-DGKVRAD--VVPIAPDVGGL 56

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +   +V +  ++ +G  LL  +       ++  +  + + +  +D             DV
Sbjct: 57  VTDVRVHDNQKVTKGQVLLVIDPSRYRIALEHAQADLASQQAELDEAVREDRRNRALPDV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           +      +    ++ L    +      +    ++ R+ 
Sbjct: 117 VATESTEQGATRVEKLRAAVAQARAARDLAALNLERTR 154


>gi|153008590|ref|YP_001369805.1| RND family efflux transporter MFP subunit [Ochrobactrum anthropi
           ATCC 49188]
 gi|151560478|gb|ABS13976.1| efflux transporter, RND family, MFP subunit [Ochrobactrum anthropi
           ATCC 49188]
          Length = 415

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 73/191 (38%), Gaps = 30/191 (15%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITW-------------SILLP------IEISVSSSG 48
           + KR    + +    L I  I+    W             S L        IE ++++ G
Sbjct: 17  SQKRARSKARRWWLWLPIAAIVASAGWYFYGSGEAGGQKTSYLAETVTRGDIENAITAVG 76

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
            + +    + + +  SG +K  +VE G Q+ QG  +   +       +++    + NL+ 
Sbjct: 77  TL-SALRSINVGAQVSGQLKSVKVEVGDQVKQGELIAEIDPSPFEKKVEISSAQLDNLKA 135

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY--RSLKM 166
            + ++++ L         L+KA  +R+  LL   G   ST  +       +    ++L  
Sbjct: 136 QLLSKQAQL--------TLKKANAARQRSLLATRGVSQSTVDQADADLAMADADVKALGA 187

Query: 167 KLTRMRSIYLN 177
           ++ +  +   +
Sbjct: 188 QIRQQEAQLAS 198



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 6/170 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q D  + + +  ++ L L++    ++  L     +      +    L     D++    
Sbjct: 128 AQLDNLKAQLLSKQAQLTLKKANAARQRSLLATRGVSQSTVDQADADLAMADADVKALGA 187

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
               + ++L   +       I SP+ GT+V  Q+          Q    IV  + L    
Sbjct: 188 QIRQQEAQLASDKVDLGYTKIYSPMEGTVVD-QAAKEGETLNAVQSAPTIVTVADLKVMT 246

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           + A+V+   I  +K G      F       EK+F   + +I P  + ++N
Sbjct: 247 VEAQVSEADIGRLKPGMPVY--FTLLGQ-PEKRFTGTLRQIKPTPATENN 293


>gi|120599125|ref|YP_963699.1| RND family efflux transporter MFP subunit [Shewanella sp. W3-18-1]
 gi|120559218|gb|ABM25145.1| efflux transporter, RND family, MFP subunit [Shewanella sp.
           W3-18-1]
          Length = 361

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 58/194 (29%), Gaps = 22/194 (11%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT--FADEM 277
           +R      L+  E I + K     + +   E N   +        +LE+++         
Sbjct: 85  KRGDLLVQLQNAEQIAKVKAAQVKVTDNKRELNRISSLVTSRTVAELERDRLQTLIDTTR 144

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVT 335
           ++L   + +   + I +P  G  +  +  S  +         +I          +   V 
Sbjct: 145 AELEQAQVSLNDRRIWAPFDGR-LGLRQVSVGSLVTPGT---EITTLDDISKIKLDFSVP 200

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            + IQ ++ G         + D     F  I+  ID  ++                 I  
Sbjct: 201 ERFIQELRPGKLVEATAIAFPDET---FNGIVTSIDSRVNPTT-----------RAVIVR 246

Query: 396 LAFSDNNIELRNGF 409
               + ++ L  G 
Sbjct: 247 AEIPNPDLRLLPGM 260


>gi|332286662|ref|YP_004418573.1| HlyD family secretion protein [Pusillimonas sp. T7-7]
 gi|330430615|gb|AEC21949.1| HlyD family secretion protein [Pusillimonas sp. T7-7]
          Length = 391

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/263 (11%), Positives = 93/263 (35%), Gaps = 7/263 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + + PI  ++ + G +    N V ++S   G ++K    +G ++  G  L   +     +
Sbjct: 64  AEIGPINYTLKAIGTVTAF-NTVTVRSRVDGELQKIAFRDGQKVQAGDLLAQIDPRTYQN 122

Query: 95  LIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +D      K     +   +  L     L  +  + ++  +++   +   LG   S  + 
Sbjct: 123 ELDQALGQQKQNEAQLVNARRDLQRYQLLYKQNSIAKQQVDAQAALVQQLLGSRKSDQAA 182

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V +  +   +  +   ++    +          +S    +++  Q     +  LF     
Sbjct: 183 VDSAKLQLEFTRITAPISGRLGLRKIDEGNMVNASNTDGIVTITQTQPISV--LFTLPQA 240

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
              D+  Q R       +L +   ++K     +  + ++ ++       +   +  +++ 
Sbjct: 241 QLPDVLAQLRAGKTLVTDLYDRNDQKKIATGQLMSVDNQIDVATGTVSFKARFE-NEDET 299

Query: 272 TFADEMSKLTILEKTREQKTILS 294
            F ++ + + +   T +   I +
Sbjct: 300 LFPNQFANVRLRVDTTQALAIPA 322


>gi|323976735|gb|EGB71823.1| efflux transporter [Escherichia coli TW10509]
          Length = 268

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 8   LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 67

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 68  QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 126

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 127 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 179

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 180 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 218


>gi|321399465|emb|CBZ08666.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 916

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/234 (9%), Positives = 77/234 (32%), Gaps = 7/234 (2%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKK--VSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +    +     L   +    T     +    +++ LR  +  +++ +  L       ++ 
Sbjct: 480 QEAEVVALRQLLAEAQREAQTAGARQRDSGAAVQALRDQMAEQEAEVVALRQLLAEAQRE 539

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            ++   +  D      +   ++        ++ + L       ++    + D       L
Sbjct: 540 AQAAGARQRDSGAAVQALRDQMAEQEAEMVALRQLLAEAQREAQAAGARQRDSGAAVQAL 599

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN---MLRHIN 245
           R  ++  + ++  ++ L  +          ++R    +   LR+ + EQ+     LR + 
Sbjct: 600 RDQMAEQEAEMVALRQLLAEAQREAQAAGARQRDSGAAVQALRDQMAEQEAEVVALRQLL 659

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                         ++    ++  +   A++ +++  L +   +    +P+ G 
Sbjct: 660 AEAQREAQAAGARQRDSGAAVQALRDQMAEQEAEMVALRQLLAEAQREAPVDGV 713



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/225 (8%), Positives = 67/225 (29%), Gaps = 14/225 (6%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           ++   +   +  +      +   +  L     +              +     +     +
Sbjct: 633 DSGAAVQALRDQMAEQEAEVVALRQLLAEAQREAQAAGARQRDSGAAVQALRDQMAEQEA 692

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++            +  +  +RS+     D       LR  ++  + ++  ++ L  +  
Sbjct: 693 EMVALRQLLAEAQREAPVDGVRSL-----DSGAAVQALRDQMAEQEAEMVALRQLLAEAQ 747

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---ANYLKEISRDLE 267
                   ++R    +   LR+ + EQ+  +  + +L  EA  E         +    ++
Sbjct: 748 REAQAAGARQRDSGAAVQALRDQMAEQEAEMVALRQLLAEAQREAPVDGVRSLDSGAAVQ 807

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
             +   A++ +++  L +   +    +  AG      +       
Sbjct: 808 ALRDQMAEQEAEMVALRQLLAEAQREAQTAG------ARQRGGVI 846


>gi|260553923|ref|ZP_05826190.1| secretion protein HlyD [Acinetobacter sp. RUH2624]
 gi|260404955|gb|EEW98458.1| secretion protein HlyD [Acinetobacter sp. RUH2624]
          Length = 339

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/343 (10%), Positives = 96/343 (27%), Gaps = 24/343 (6%)

Query: 17  LKRMTLLSIIGIIGLITWSILLP--IEISVSSSGEILNEDNVVEIKSPFS-GIIKKFQVE 73
           +  + ++  + +IG   W        + +++  G +          +    G I+K  V+
Sbjct: 6   IAIVLVIIALVVIGFWVWGYKTKNQEDSNLTLYGNVDI---RQVSLAFEQPGRIEKLLVQ 62

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++  G  L T  +     +   +  +    +     ++              +   +
Sbjct: 63  EGDKVKAGQVLATL-NTNALQIQAKQAQAQLKAQQEAIVKQQVGARPEEISQARAQLASA 121

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           + +               +   G +   + L    +   S      + +    L+     
Sbjct: 122 QADLDKASKNLQRLQILVISTDGRAISQQELDYAKSNQHSAEAAVRERQANLELVIKGAR 181

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              ++ T  +    K  +   + N  + ++      +     ++   +    +      L
Sbjct: 182 QEDREATKAQYDATKANLDLINYNLTQAVLKSPVNAVVRARLQEVGDMTTAQKAVYTLAL 241

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS--SSNY 311
               +++     L  N++  +     +    +         PI G I Y  S +  +   
Sbjct: 242 TDPKWVR-----LYANEKDLSSIH--MGGTAQVIRDADPNQPINGKIGYISSVAEFTPKT 294

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFP 353
            Q  +                +V        +K G   TV+ P
Sbjct: 295 VQTDE-------IRTTLVYEVRVYVNDPNDQLKMGQPVTVKVP 330



 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 90/267 (33%), Gaps = 22/267 (8%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLN 217
            V  +L     ++++          + ++++  + +  ++++  +  L    A       
Sbjct: 71  QVLATLNTNALQIQAKQAQAQLKAQQEAIVKQQVGARPEEISQARAQLASAQADLDKASK 130

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI------SRDLEQNQR 271
             +R+           I +Q+      N+   EA +       E+        D E  + 
Sbjct: 131 NLQRLQILVISTDGRAISQQELDYAKSNQHSAEAAVRERQANLELVIKGARQEDREATKA 190

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
            +    + L ++     Q  + SP+   +V  +     +    +Q  +  +  +   ++R
Sbjct: 191 QYDATKANLDLINYNLTQAVLKSPVNA-VVRARLQEVGD-MTTAQKAVYTLALTDPKWVR 248

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEY 386
                K +  +  G TA V      +         I  I  +      + Q + ++T   
Sbjct: 249 LYANEKDLSSIHMGGTAQVIRDADPNQ---PINGKIGYISSVAEFTPKTVQTDEIRTTLV 305

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEV 413
           YEV + + D      N +L+ G P  V
Sbjct: 306 YEVRVYVNDP-----NDQLKMGQPVTV 327


>gi|255658449|ref|ZP_05403858.1| putative periplasmic component of efflux system [Mitsuokella
           multacida DSM 20544]
 gi|260849785|gb|EEX69792.1| putative periplasmic component of efflux system [Mitsuokella
           multacida DSM 20544]
          Length = 428

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 82/281 (29%), Gaps = 55/281 (19%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +I +  V  G  +  G  +   +   T +        I NL   +   +  LD +     
Sbjct: 62  MITEKVVAEGEHVEAGDVIAHVQSTVTDE-------QIANLEQTVALSQRNLDEIKKGQT 114

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V                    S+ S                                   
Sbjct: 115 VTVAVPSPAPAPAASAPRSSGSSQSV---------------------------------- 140

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                  +S +  +  M  LFE  A+S           Y + +    +     +      
Sbjct: 141 -------ASAESRMNRMNELFEMGAISAVQ-RDAAVSAYHAAVAAASSSAPAASAPSSSP 192

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            +  +   +  +     + +L+  Q   A     L   ++   +  I++P+AGT+ Y Q 
Sbjct: 193 AVRYQTTTQPPDPKAVQNAELQLKQAQAA-----LDNAKQDAAETDIVAPVAGTVYYAQG 247

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
               +  +  + +   V ++   ++ AKV+P +   ++ G 
Sbjct: 248 IDEGSTVKAGETVAS-VGNADDIWVEAKVSPDKAAKIRLGQ 287


>gi|254193091|ref|ZP_04899526.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
 gi|169649845|gb|EDS82538.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
          Length = 585

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/326 (11%), Positives = 94/326 (28%), Gaps = 25/326 (7%)

Query: 1   MHHFMWKNLKRNHPASLKRMT-LLSIIGIIGLITWSILLPI--EISVSSSGEILNEDNVV 57
           + H       R  P  L  +    +  G++  + W +L  +   +   SS   +  + V 
Sbjct: 88  VTHDEPVPRGRRAPRPLWTLVPRAAGYGVVFFVIWMVLTIMFPNVFTRSSERAVVNNEVT 147

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD----LIDLKKVSIKNLRCHIDTE 113
            + SP  G++ +  V  G       PL T ++          +  KK+  +        E
Sbjct: 148 LVTSPVEGVVTEQHVTAGKPFDANQPLATVQNPNVDRALLIDLTGKKLDNQQREDAARAE 207

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            +  +      +   + ++S  ++      +       V    +      +        +
Sbjct: 208 LAGDESQLASTEHDLQRYQSVAQKEHAATIRALEARLAVARAQVDQQEDIVNRNQAMQWA 267

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
             ++          L  L ++       +++       S++ +         +T E   +
Sbjct: 268 GAVSEAYTSASRYQLSILSNAKAAAAAELEHAVANGDASRSKV------YASATDEPAAS 321

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           + ++  +L            +F  Y + + + +   Q+                 +  I 
Sbjct: 322 LSQRGRLLGADIAQRKAEIAQFDAYGQSVDKLIAAEQQRL-----------DRLSRIEIR 370

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLM 319
           S   G +    +            L+
Sbjct: 371 SGEPGVVEDVLA-PPGTRVAAGATLI 395


>gi|126331014|ref|XP_001368252.1| PREDICTED: similar to centromere protein E [Monodelphis domestica]
          Length = 2638

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 79/199 (39%), Gaps = 3/199 (1%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            +E  + +  ++  +  ++     E+  L           +  ES++EQ+ +   + +   
Sbjct: 1577 LEEINSVAKERDELTKIQEAFYIERDQLKEAIRDLRAKIQELESKQEQMFNVREEDNEAQ 1636

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             K+    +  +   L  K + +  I L  L+L  K        +S  ++   +  + E  
Sbjct: 1637 EKM--KEMEQLKEQLISKESTLERISLENLELAQKLQASLEETTSVAEERDELTKIKEAL 1694

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             + ++ L +  R +    LE++E +   +  L+   E  D+   E  +  +++ +   Q 
Sbjct: 1695 HIERDQLKETIRDLRAKDLEIQEELRIAQKSLKEHQETVDKLK-ECISEKEDVEKTSAQL 1753

Query: 270  QRTFADEMSKLTILEKTRE 288
            Q    +   +L I +K+ +
Sbjct: 1754 QEKDLETQEELRIAQKSLK 1772



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 65/175 (37%), Gaps = 5/175 (2%)

Query: 100  KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            K  ++  R  +  +   L+    +   + +     +E++ +         SK F     S
Sbjct: 1788 KEDVEKTRAQLQEKIQELESKQKQMFNVREEDNEAQEKMKEMEQLKEQLISKEFTLERIS 1847

Query: 160  VYR-SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT-MMKNLFEKNAVSQNDLN 217
            +    L  KL        +  +  ++ + ++  L   +  L   +++L  K   +Q +L 
Sbjct: 1848 LENLELAQKLQASLEETTSVAEERDELTKIKEALHIERDQLKKTIRDLRAKGLETQEELR 1907

Query: 218  QQE---RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              +   +   ++   L+E + E+   +    E +++   E    ++E+    EQ 
Sbjct: 1908 IAQMGLKDHQETIDRLKECVSEKVAQVSKNQEAFEKTKAELQEKIQELQEKKEQV 1962


>gi|194428350|ref|ZP_03060891.1| macrolide-specific efflux protein MacA [Escherichia coli B171]
 gi|194413565|gb|EDX29846.1| macrolide-specific efflux protein MacA [Escherichia coli B171]
          Length = 364

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 77/231 (33%), Gaps = 22/231 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQN 269
           ++N + + E  + +   + ++   E K      +     A  +      L   + ++   
Sbjct: 97  AENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVK 156

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKL 327
           Q       + L   +   +   I++P+AG +    +          Q   ++ +      
Sbjct: 157 QAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMST 215

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++A+V+   + H+K G  A   F    D    +++  I+     +      +    +Y
Sbjct: 216 MLVKAQVSEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFY 268

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
               ++      + N  LR    A+V     +     T     +  P+ DN
Sbjct: 269 YARFEVP-----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 314



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 53/168 (31%), Gaps = 1/168 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D          K      + 
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIKRNQ 164

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                         I         + + L+       +    +  L +
Sbjct: 165 ASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLAD 212


>gi|332097097|gb|EGJ02080.1| macrolide-specific efflux protein macA [Shigella boydii 3594-74]
          Length = 263

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 3   LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAEIKRN 62

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 63  QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 121

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 122 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 174

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 175 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 213


>gi|332532668|ref|ZP_08408544.1| putative RND efflux membrane fusion protein [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037884|gb|EGI74333.1| putative RND efflux membrane fusion protein [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 350

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 81/260 (31%), Gaps = 30/260 (11%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               S +   +           +    + +  +     + S Q D        + + VS+
Sbjct: 34  QADSSQMSTQVTAHTVTSEENAVMIEAIGSARANQAIYIKSAQNDYVTDIYFKDGDLVSK 93

Query: 214 NDLNQQERIVYKSTL--ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
                Q +   +     EL  N+ E+K  L  + EL        +         LE+   
Sbjct: 94  GQKLVQLQSQQEQLAVKELGINLREEKRQLDRLTEL--------SRSQSTAKSLLEEQLS 145

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 ++L   +    + TI +P +G  +  +  S   Y   +  +  +     ++ I+
Sbjct: 146 RVDATEAQLESAKTKLNEMTITAPFSGL-LGKREISVGAYVSNTTIITTL---DDISIIK 201

Query: 332 A--KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
              KV  K +  +  G     +   Y       F   +  I   I     +         
Sbjct: 202 VDFKVPEKYLAQLNIGMKVLTQNDAYPGQT---FNGKVTHISSRIDSVTRS--------- 249

Query: 390 ILKITDLAFSDNNIELRNGF 409
            +++T  +F++ +  LR G 
Sbjct: 250 -VEVT-ASFANKSGLLRPGM 267



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 38/103 (36%), Gaps = 4/103 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +     ++G  + +G  L+  +  +    +    ++++  +  +D     L  L+     
Sbjct: 80  VTDIYFKDGDLVSKGQKLVQLQSQQEQLAVKELGINLREEKRQLDR----LTELSRSQST 135

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            +   E +  ++     +  S  +K+    I++ +  L  K  
Sbjct: 136 AKSLLEEQLSRVDATEAQLESAKTKLNEMTITAPFSGLLGKRE 178


>gi|320107848|ref|YP_004183438.1| RND family efflux transporter MFP subunit [Terriglobus saanensis
           SP1PR4]
 gi|319926369|gb|ADV83444.1| efflux transporter, RND family, MFP subunit [Terriglobus saanensis
           SP1PR4]
          Length = 436

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 49/137 (35%), Gaps = 5/137 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +     V  + S  SG +       G  + +G  L+  +   T   +   + S+  
Sbjct: 113 ALGTVTPLATV-NVYSQVSGRVLAVNYREGQMVHKGQVLVEIDPRPTEAQLQQAQGSLAR 171

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            R  +D  ++ ++    +  + E+A    E+ + D           V N      Y  ++
Sbjct: 172 DRALLD--QARVNLRRYQEALKERAIA--EQTVFDQSATVRQYEGTVANDEGQVKYYEVQ 227

Query: 166 MKLTRMRSIYLNRLDLE 182
           +  + + +    R+ L 
Sbjct: 228 LSYSHIIAPISGRIGLR 244


>gi|293404186|ref|ZP_06648180.1| macrolide transporter subunit MacA [Escherichia coli FVEC1412]
 gi|291428772|gb|EFF01797.1| macrolide transporter subunit MacA [Escherichia coli FVEC1412]
          Length = 268

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 8   LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 67

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 68  QASLATAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 126

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 127 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 179

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 180 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 218


>gi|288961656|ref|YP_003451966.1| secretion protein [Azospirillum sp. B510]
 gi|288913936|dbj|BAI75422.1| secretion protein [Azospirillum sp. B510]
          Length = 335

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 80/254 (31%), Gaps = 23/254 (9%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
             +  G +  E  +++I +   G+I +  V  G+ +  G  L   +D      ++  K +
Sbjct: 51  VAAGRGRVDVEGGMIQIAAQRDGVITEIFVTEGADVRAGDLLARQDDRAARAALEEAKAA 110

Query: 103 IKNLRCHIDTEKSALDFLNNK-----------------YDVLEKAFESREEQLLDFLGKY 145
           +        T +  +     +                 YD  +   E  E +L       
Sbjct: 111 LAEAVARGGTLRVRVSAARRERNRLDRLRRDGAEAVKLYDEAQSRLEEAEAELTAHDATV 170

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               ++V +  +    R ++  +       L R      +  +  L +    +  +++  
Sbjct: 171 RLARARVASAEMEIAQREVRAPVDGRIVRLLARPGSGASTLNVSTLFTLVPNERFILRVD 230

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            E+       L +Q       T++L          +  I +L  +  L+ ++  + +   
Sbjct: 231 IEE------RLMRQVVPGQPVTIQLDSGTETLSGEVLRIGQLLGQRKLDPSDAQQRVDER 284

Query: 266 LEQNQRTFADEMSK 279
           + +   +      +
Sbjct: 285 VVEAIVSLPSRPDR 298



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 50/132 (37%), Gaps = 20/132 (15%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           E  + L+E   +L  +  T     +++   E    Q+ + +P+ G IV          A+
Sbjct: 151 EAQSRLEEAEAELTAHDATVRLARARVASAEMEIAQREVRAPVDGRIVRLL-------AR 203

Query: 314 QS--------QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       L  +VP ++   +R  +  + ++ V  G   T++     D   +    
Sbjct: 204 PGSGASTLNVSTLFTLVP-NERFILRVDIEERLMRQVVPGQPVTIQL----DSGTETLSG 258

Query: 366 IIEKIDPIISQQ 377
            + +I  ++ Q+
Sbjct: 259 EVLRIGQLLGQR 270


>gi|239831101|ref|ZP_04679430.1| efflux transporter, RND family, MFP subunit [Ochrobactrum
           intermedium LMG 3301]
 gi|239823368|gb|EEQ94936.1| efflux transporter, RND family, MFP subunit [Ochrobactrum
           intermedium LMG 3301]
          Length = 374

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 58/206 (28%), Gaps = 16/206 (7%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V   D+ ++   V +   E  +    +        +   +   +           + + 
Sbjct: 91  YVKAGDMVKEGDPVAELDAETEKIAVAKAETALKDAQTTRQRIAKLRATNTATEVQVVET 150

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   A+    L   +    ++T+ +PI+G +         NY      + +I        
Sbjct: 151 ELAVANAQLALQDAQLALSRRTVRAPISGIVGILPVN-VGNYITAQTSIGRI-DDRSKVL 208

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I   V  +    +K G   T     +           I  +D ++ +    L       V
Sbjct: 209 IDIWVPERFAPQIKVGQPLTAESTAFPGETY---SGEINAVDNMLDEASRTLH------V 259

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
             ++      +    LR G    V  
Sbjct: 260 RAEVP-----NTQDRLRAGMSFSVTI 280



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 42/131 (32%), Gaps = 2/131 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFE-DIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           I    SG + K  V+ G  + +G P+   + + E   +   +              K   
Sbjct: 79  ITPYSSGYMTKLYVKAGDMVKEGDPVAELDAETEKIAVAKAETALKDAQTTRQRIAKLRA 138

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                +  V+E        QL        +   +     IS +   L + +    +   +
Sbjct: 139 TNTATEVQVVETELAVANAQLA-LQDAQLALSRRTVRAPISGIVGILPVNVGNYITAQTS 197

Query: 178 RLDLENKSSLL 188
              ++++S +L
Sbjct: 198 IGRIDDRSKVL 208


>gi|238751393|ref|ZP_04612886.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Yersinia rohdei
           ATCC 43380]
 gi|238710451|gb|EEQ02676.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Yersinia rohdei
           ATCC 43380]
          Length = 313

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 55/173 (31%), Gaps = 12/173 (6%)

Query: 204 NLFEKN----AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            L EK      + Q    Q            +    E++        L  +A  +    +
Sbjct: 69  QLVEKGQILFVIDQPRYQQALAEAEADVAYYQTLAAEKQRESGRRQRLGIQAMSQ--EEI 126

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            + +  L+  +   A  ++   + +   E+ T+ +P  G +      +   +  +    +
Sbjct: 127 DQSNNVLQTVRHQLAKAIAIRDLAKLDLERTTVRAPAEGWVTNLNVHA-GEFINRGATAV 185

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            +V      YI A +   ++  VK GY A +        R       ++ +  
Sbjct: 186 ALV-KKDSFYILAYLEETKLDGVKPGYRAEI--TPLGSNR--ILHGTVDSVSA 233



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/146 (10%), Positives = 46/146 (31%), Gaps = 6/146 (4%)

Query: 16  SLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            +    L+ ++GII     W+           + +     +V+ I    SG++    V++
Sbjct: 12  RIGITLLVVLLGIIAVFKIWAFYTE----SPWTRDAKFTADVIAIAPDVSGLLTDVPVKD 67

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L   +       +   +  +   +  +  EK        +  +   + E  
Sbjct: 68  NQLVEKGQILFVIDQPRYQQALAEAEADVAYYQT-LAAEKQRESGRRQRLGIQAMSQEEI 126

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSV 160
           ++         H     +    ++ +
Sbjct: 127 DQSNNVLQTVRHQLAKAIAIRDLAKL 152


>gi|218671159|ref|ZP_03520830.1| efflux cation transporter protein [Rhizobium etli GR56]
          Length = 303

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 61/164 (37%), Gaps = 6/164 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
             +V +SG +      V         I    V+ GS + +G PL           +  ++
Sbjct: 40  SETVPASGWLKPWQEAVIASETSGLRITDVLVDVGSVVTKGQPLARLSQESVLADLRKQE 99

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            +++N +  +   K+  D           + E   E L D      S  S+       + 
Sbjct: 100 AAVENAKASLSKAKANADRARQLRTSGALSDEKIVEYLADEQTATASLASE------EAA 153

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             S K+KL +     ++   + ++S+ L A++S+  +   M++ 
Sbjct: 154 LDSEKIKLAQTTITAVDDGMITSRSADLGAVVSAGTELFRMVRQ 197



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 54/164 (32%), Gaps = 12/164 (7%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           DL +QE  V  +   L +         R +      ++ +   YL +          + A
Sbjct: 94  DLRKQEAAVENAKASLSKAKANADRA-RQLRTSGALSDEKIVEYLADEQT----ATASLA 148

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
            E + L   +    Q TI +   G I   +S            L ++V   +    +A+V
Sbjct: 149 SEEAALDSEKIKLAQTTITAVDDGMITS-RSADLGAVVSAGTELFRMV-RQQRIEWQAEV 206

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + + +  + +G +  +          +     +  + P +S   
Sbjct: 207 SARYLPRITEGLSVKI-----NGPDGQIIDGKVRLVGPSVSTDT 245


>gi|149186329|ref|ZP_01864642.1| hypothetical protein ED21_22608 [Erythrobacter sp. SD-21]
 gi|148829918|gb|EDL48356.1| hypothetical protein ED21_22608 [Erythrobacter sp. SD-21]
          Length = 330

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 49/144 (34%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+ SG +     +V+I S  SG++    V+ G ++ QG  L T +D +    +     +I
Sbjct: 59  VAGSGVVEPSSELVQIGSALSGLVTGLYVQPGDRVSQGQTLFTVDDRQARSQLREANAAI 118

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              R  I   +SA     ++ ++     +       + +       +      ++     
Sbjct: 119 GEARAAIAEARSAQSTAASQLELYRNVDDPAAVSRSEVIRAEGEASAADQRLSLARARLE 178

Query: 164 LKMKLTRMRSIYLNRLDLENKSSL 187
                       L RL +    S 
Sbjct: 179 AAEARAASAQTELGRLTVRAPISG 202


>gi|77165459|ref|YP_343984.1| secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
 gi|76883773|gb|ABA58454.1| Secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
          Length = 374

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 6/159 (3%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQRT 272
           +    E  + ++   L           R +      A         L +   +L+ ++  
Sbjct: 119 EKTDLELALERAKATLNSLEASHALAQRQLTRTQSLAKKRLITEEILNQRETELKVSKAE 178

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A +   +   ++  E+  I +P    +V  +       A    PL+ I+  ++   + A
Sbjct: 179 LAVQRITVKQQQRALEKTVIRAPFKAIVVE-RLGQVGELAMPGTPLIHIL-DAEQILVSA 236

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           K+ P+ I  ++    ATV F         K   ++  +D
Sbjct: 237 KLQPRDIFSLRN--AATVVFIAENHPYSLKLHRVVPALD 273



 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 56/136 (41%), Gaps = 5/136 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +++S E++  +N   + +  + +I    VE G  +  GTPL+  E  +    ++  K ++
Sbjct: 76  ITASAEVITLNNSQ-LNAEVTAVILGLPVEIGQVVAPGTPLVLLEKTDLELALERAKATL 134

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            +L       +  L     +   L K     EE L     +   + +++    I+   + 
Sbjct: 135 NSLEASHALAQRQL----TRTQSLAKKRLITEEILNQRETELKVSKAELAVQRITVKQQQ 190

Query: 164 LKMKLTRMRSIYLNRL 179
             ++ T +R+ +   +
Sbjct: 191 RALEKTVIRAPFKAIV 206


>gi|15487339|dbj|BAB64541.1| macrolide-specific ABC-type efflux carrier [Escherichia coli]
          Length = 380

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 120 LRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 179

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 180 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSAMLVKAQV 238

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 239 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 291

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 292 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 330



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 18/188 (9%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLIT-WSIL--------------LPIEISVSSSGE 49
           +++   +      KR  +  +I I GLIT W IL                ++ SV ++G+
Sbjct: 5   VFRKFMKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGK 64

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +     V ++ +  SG +K   V  G ++ +   L   +  +  + I   + ++  LR  
Sbjct: 65  LDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQ 123

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
               ++ L      Y   ++  +++     D      +T   V    I ++   +K    
Sbjct: 124 RQQAEAELKLARVTYSRQQRLAQTKAVSQQDL--DTAATEMAVKQAQIGTIDAQIKRNQA 181

Query: 170 RMRSIYLN 177
            + +   N
Sbjct: 182 SLDTAKTN 189


>gi|182413333|ref|YP_001818399.1| RND family efflux transporter MFP subunit [Opitutus terrae PB90-1]
 gi|177840547|gb|ACB74799.1| efflux transporter, RND family, MFP subunit [Opitutus terrae
           PB90-1]
          Length = 405

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/315 (12%), Positives = 75/315 (23%), Gaps = 63/315 (20%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                       LN    V  + + +   +++  + +           G           
Sbjct: 59  AREIAAGEQATLLNASGYVTARRWATVSSKVMGKIIEVLVDEGARVEAGQVLARIDASNT 118

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
              +R             +   A L   + DL   + L  K  VS  DL++ E       
Sbjct: 119 EANLRLAESQLDAARKALAETEAQLELAELDLKRQRELAAKQIVSPADLDRAESAARALR 178

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                 + E     R ++                                    +  +  
Sbjct: 179 GRRERGLSEIVVAQRQVD------------------------------------VWRQQL 202

Query: 288 EQKTILSPIAGTIVYNQSF--------SSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQ 338
           +   I +P AG +    +         SS  + +     L+ +        I   V    
Sbjct: 203 DDTVIRAPFAGVVTSKNAQPGEMISPMSSGGFTRTGVCTLVDM----SSLEIEVDVNESY 258

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I  V  G         Y D +     + +  I P   +Q           V +++    F
Sbjct: 259 INRVTAGQPVVATLDSYPDWK---IPSRVIAIIPTADRQKAT--------VKVRV---GF 304

Query: 399 SDNNIELRNGFPAEV 413
              +  +      +V
Sbjct: 305 DQLDPRILPDMGVKV 319



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 44/119 (36%), Gaps = 5/119 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V+ G+++  G  L   +   T   + L +  +   R  +   ++ L+    + 
Sbjct: 91  GKIIEVLVDEGARVEAGQVLARIDASNTEANLRLAESQLDAARKALAETEAQLEL--AEL 148

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           D+  +   + ++ +         + ++          R L   +   R + + R  L++
Sbjct: 149 DLKRQRELAAKQIVSPADLDRAESAARALRGRR---ERGLSEIVVAQRQVDVWRQQLDD 204


>gi|320175319|gb|EFW50425.1| Macrolide-specific efflux protein MacA [Shigella dysenteriae CDC
           74-1112]
          Length = 365

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 105 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQELDTAATEMAVKQAQIGTIDAQIKRN 164

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 165 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 223

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 224 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 276

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 277 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 315



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 40  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 98

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++   ++ + +        +T   V    I +
Sbjct: 99  EATLMELRAQRQQAEAELKLARVTYSRQQRL--AQTQAVSQQELDTAATEMAVKQAQIGT 156

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 157 IDAQIKRNQASLDTAKTN 174


>gi|317122802|ref|YP_004102805.1| efflux transporter RND family, MFP subunit [Thermaerobacter
           marianensis DSM 12885]
 gi|315592782|gb|ADU52078.1| efflux transporter, RND family, MFP subunit [Thermaerobacter
           marianensis DSM 12885]
          Length = 400

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/225 (10%), Positives = 58/225 (25%), Gaps = 23/225 (10%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--------------ANY 258
           +  + Q E  + ++ LE R    + +       E                       +  
Sbjct: 100 EGQVRQAELALQRAQLEHRRAQGQLERARACARENGTRGEAAQGPPDEPAPPDHCIGSVP 159

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
             E    +E  +        +L    +      + S + G ++               PL
Sbjct: 160 EAEAELQVELARLGVEQARWQLEQARRQLAGAEVRSELDGVVLQVADPEGDLLQGAGGPL 219

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +  V   +   +   V       V+ G    +    + D     ++  +E++  ++  + 
Sbjct: 220 VT-VGTLEELVVDLVVPELDGVRVRSGQKVRILSDAFPDAT---WEGTVERVGALVVTRT 275

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
                QE       +           L+ G+   +    +     
Sbjct: 276 GMGGRQE-----TGVPVTVALPQGTPLKPGYTVNLEIVVEARQAL 315



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/170 (11%), Positives = 53/170 (31%), Gaps = 8/170 (4%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT-----FEDIETT 93
           P+E  + ++G +    +  ++       ++   VE G  + +G  L+       E     
Sbjct: 47  PMEDVIFANGRVAP-RHQQKVLPRPGLAVESIPVEEGQTVKKGDVLVRYAAGELEGQVRQ 105

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             + L++  +++ R     E++      N            E    D             
Sbjct: 106 AELALQRAQLEHRRAQGQLERARACARENGTRGEAAQGPPDEPAPPDHCIGSVPEAEAEL 165

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              ++ +   ++    ++          E +S L   +L     +  +++
Sbjct: 166 QVELARL--GVEQARWQLEQARRQLAGAEVRSELDGVVLQVADPEGDLLQ 213


>gi|293414161|ref|ZP_06656810.1| HlyD family secretion protein [Escherichia coli B185]
 gi|291434219|gb|EFF07192.1| HlyD family secretion protein [Escherichia coli B185]
          Length = 371

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGRIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|262278127|ref|ZP_06055912.1| HlyD family secretion family protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258478|gb|EEY77211.1| HlyD family secretion family protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 373

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 78/207 (37%), Gaps = 10/207 (4%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +++++G+I    W    P    +   G +  E   V  K P    I++  V+ G +I 
Sbjct: 56  LVIIALLGLIIFGLWKSYQP--KPIELQGRVEAETIHVSTKVPS--RIEEIYVQEGQKIS 111

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G PL+       +  I+ KK             +S +D  + + ++       +  +  
Sbjct: 112 KGQPLVRL----VSPEIEAKKQQALAALQSALAFQSTVDRGSQQENIDTLYANWQSTKAQ 167

Query: 140 DFLGKYHSTCSK-VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
             L K      + ++  G+ S  R  +M   +  +  L+    + + +  +   +S QK 
Sbjct: 168 ANLAKTTYQRGENLYRQGVISRQRRDEMLAAQTSAQELSEASYQ-QYARAKRGSTSQQKS 226

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYK 225
               +    K AV +    + E  ++ 
Sbjct: 227 TADAQVEIAKAAVGEAKALEAETRLFS 253


>gi|195952948|ref|YP_002121238.1| efflux transporter, RND family, MFP subunit [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932560|gb|ACG57260.1| efflux transporter, RND family, MFP subunit [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 389

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 63/167 (37%), Gaps = 14/167 (8%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q +  ++     K+  + ++ I+E+  +L H + + +EA  +  +  +E     E     
Sbjct: 119 QQEALKRNLRALKTKYQNQKKIYERDTVLYHHDAISEEAFEKSQDLYQEAKSQYEATINQ 178

Query: 273 FADEMS-------KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
                        ++  LE   +  TI++P  G +V  +     N A   +P++ +    
Sbjct: 179 IEGLSQTMMGIGNQIKGLEDDLKYTTIVAPFDG-VVSKRYLKEGNLAIPGKPIIDLEGTD 237

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               +   V    + +VK G   T++         K   A +E I P
Sbjct: 238 GKYEVYVDVPQDFVNYVKVGDVETIKL------NGKTQNATVETIIP 278



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 43/125 (34%), Gaps = 3/125 (2%)

Query: 70  FQV-ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             V + G+++ +G  L+  ++      I+  + +  ++    +  K  L  L  KY   +
Sbjct: 79  LYVAKEGTKVKKGDLLVKLDNSNIVSNINALRNNQASIAFQQEALKRNLRALKTKYQNQK 138

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           K +E   + +L           +             +  + ++  +    + + N+   L
Sbjct: 139 KIYE--RDTVLYHHDAISEEAFEKSQDLYQEAKSQYEATINQIEGLSQTMMGIGNQIKGL 196

Query: 189 RALLS 193
              L 
Sbjct: 197 EDDLK 201


>gi|146099983|ref|XP_001468807.1| hypothetical protein [Leishmania infantum]
          Length = 1476

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 77/225 (34%), Gaps = 16/225 (7%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            E+G +   G   L  ++      ++         R   + E+ A D    + +    A E
Sbjct: 958  EDGERQKAGNRQLASDNERLATELE---------RAQEEAERLAGDLEKAQEEAETLAAE 1008

Query: 133  SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRAL 191
             ++ Q      K  +      N  +++     + +  R+   +     + E  +  L+  
Sbjct: 1009 LQKAQEDGERQKADNRQLASDNERLATELERAQEEAERLAGDLEKAEEEAETLAGELQKA 1068

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                ++     + L   N     +L + +    +   +L +   E + +   + +  ++ 
Sbjct: 1069 QEDGERQKADNRQLASDNERLATELERAQEEAERLAGDLEKAEEEAETLAGELQKAQEDG 1128

Query: 252  NLEFANYLK------EISRDLEQNQRTFADEMSKLTILEKTREQK 290
              + A+  +       ++ +LE+ Q        +L   ++  E++
Sbjct: 1129 ERQKADNRQLASDNERLATELERAQEEAETLAGELQKAQEDGERQ 1173



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 71/201 (35%), Gaps = 7/201 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            D ++++ +  R   + E+ A D    + +    A E ++ Q      K  +      N  
Sbjct: 1029 DNERLATELERAQEEAERLAGDLEKAEEEAETLAGELQKAQEDGERQKADNRQLASDNER 1088

Query: 157  ISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +++     + +  R+   +     + E  +  L+      ++     + L   N     +
Sbjct: 1089 LATELERAQEEAERLAGDLEKAEEEAETLAGELQKAQEDGERQKADNRQLASDNERLATE 1148

Query: 216  LNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQN 269
            L + +        EL   +E+   QK   R +    +    E     +E  R   DLE+ 
Sbjct: 1149 LERAQEEAETLAGELQKAQEDGERQKADNRQLASDNERLATELERAQEEAERLAGDLEKA 1208

Query: 270  QRTFADEMSKLTILEKTREQK 290
            Q       ++L   ++  E++
Sbjct: 1209 QEEAETLAAELQKAQEDGERQ 1229



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 70/199 (35%), Gaps = 7/199 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            D ++++ +  R   + E+ A D    + +    A E ++ Q      K  +      N  
Sbjct: 861  DNERLATELERAQEEAERLAGDLEKAEEEAETLAAELQKAQEDGERQKADNRQLASDNER 920

Query: 157  ISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +++     + +  R+   +     + E  +  L+      ++     + L   N     +
Sbjct: 921  LATELERAQEEAERLAGDLEKAEEEAETLAGELQKAQEDGERQKAGNRQLASDNERLATE 980

Query: 216  LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK------EISRDLEQN 269
            L + +    +   +L +   E + +   + +  ++   + A+  +       ++ +LE+ 
Sbjct: 981  LERAQEEAERLAGDLEKAQEEAETLAAELQKAQEDGERQKADNRQLASDNERLATELERA 1040

Query: 270  QRTFADEMSKLTILEKTRE 288
            Q         L   E+  E
Sbjct: 1041 QEEAERLAGDLEKAEEEAE 1059



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 75/201 (37%), Gaps = 7/201 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            D ++++ +  R   + E  A +    + D   +  ++R+    +         ++     
Sbjct: 1141 DNERLATELERAQEEAETLAGELQKAQEDGERQKADNRQLASDNERLATELERAQEEAER 1200

Query: 157  ISS-VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++  + ++ +   T    +   + D E + +  R L S +++  T ++   E+      D
Sbjct: 1201 LAGDLEKAQEEAETLAAELQKAQEDGERQKADNRQLASDNERLATELERAQEEAERLAGD 1260

Query: 216  LNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQN 269
            L + E        EL   +E+   Q+   R +    +    E     +E  R   DLE+ 
Sbjct: 1261 LEKAEEEAETLAGELQKAQEDGERQRADNRQLASDNERLATELERAQEEAERLAGDLEKA 1320

Query: 270  QRTFADEMSKLTILEKTREQK 290
            Q        +L   ++  E++
Sbjct: 1321 QEEAERLAGELQKAQEDGERQ 1341



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 76/201 (37%), Gaps = 7/201 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            D ++++ +  R   + E+ A D    + +    A E ++ Q      K  +      N  
Sbjct: 1085 DNERLATELERAQEEAERLAGDLEKAEEEAETLAGELQKAQEDGERQKADNRQLASDNER 1144

Query: 157  IS-SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++  + R+ +   T    +   + D E + +  R L S +++  T ++   E+      D
Sbjct: 1145 LATELERAQEEAETLAGELQKAQEDGERQKADNRQLASDNERLATELERAQEEAERLAGD 1204

Query: 216  LNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQN 269
            L + +        EL   +E+   QK   R +    +    E     +E  R   DLE+ 
Sbjct: 1205 LEKAQEEAETLAAELQKAQEDGERQKADNRQLASDNERLATELERAQEEAERLAGDLEKA 1264

Query: 270  QRTFADEMSKLTILEKTREQK 290
            +        +L   ++  E++
Sbjct: 1265 EEEAETLAGELQKAQEDGERQ 1285



 Score = 43.5 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 70/182 (38%), Gaps = 7/182 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            D ++++ +  R   + E+ A D    + +    A E ++ Q      K  +      N  
Sbjct: 1295 DNERLATELERAQEEAERLAGDLEKAQEEAERLAGELQKAQEDGERQKAGNRQLASDNER 1354

Query: 157  ISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +++     + +  R+   +   + + E  ++ L+      ++     + L   N     +
Sbjct: 1355 LATELERAQEEAERLAGDLEKAQEEAETLAAELQKAQEDGERQKADNRQLASDNERLATE 1414

Query: 216  LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK------EISRDLEQN 269
            L + +    +   +L++   + + +   +++++D+     A   +       ++ +LE+ 
Sbjct: 1415 LERAQEEAERLAGDLQKAQEDAETLTADLHKVHDDGERLTAELQRVHDDDERLAAELEKA 1474

Query: 270  QR 271
            Q 
Sbjct: 1475 QE 1476


>gi|254499090|ref|ZP_05111782.1| hypothetical protein LDG_3165 [Legionella drancourtii LLAP12]
 gi|254351717|gb|EET10560.1| hypothetical protein LDG_3165 [Legionella drancourtii LLAP12]
          Length = 420

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 52/171 (30%), Gaps = 25/171 (14%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILL----PIEIS------------------VSSSG 48
           + H  S     L  +I ++  + W         I                     + + G
Sbjct: 21  KKHFPSENFWGLSILIVVLIGLLWFYFANKKPKINGVKALPVVTAISTARDVPVYLPALG 80

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
            +      V I+S  +G++ K   + G  + +G  L   ++     L+   +  +K    
Sbjct: 81  TVTPV-YTVTIQSQINGLLMKVLFKEGELVKKGQLLAQIDERPYQALLIQYEGDLKRDTA 139

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            +  E + +D    +    E +   +       L K +    +     I S
Sbjct: 140 LL--ENARIDLKRYQKLWKEDSVSQQVLATQQALVKQYEGNVETDLGLIQS 188



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 60/182 (32%), Gaps = 27/182 (14%)

Query: 201 MMKNLFEKN-AVSQNDLNQQ------ERIVYKSTLELRENIHEQKNMLRHINELYD--EA 251
           +MK LF++   V +  L  Q      + ++ +   +L+ +    +N    +       + 
Sbjct: 98  LMKVLFKEGELVKKGQLLAQIDERPYQALLIQYEGDLKRDTALLENARIDLKRYQKLWKE 157

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI--------VYN 303
           +      L      ++Q +     ++  +   +       I+SPI G I         + 
Sbjct: 158 DSVSQQVLATQQALVKQYEGNVETDLGLIQSTKVNLIYCNIISPIDGRIGLRLVDPGNFV 217

Query: 304 QSFSSSN--YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
           Q+ ++        + P+  I P ++         P+ I          V+   Y   + K
Sbjct: 218 QTTNTGGIAVVTTNDPMTVIFPIAEDYV------PQIIPQAYANKALVVK--AYDRQQTK 269

Query: 362 KF 363
             
Sbjct: 270 LL 271


>gi|240949718|ref|ZP_04754053.1| putative RND efflux membrane fusion protein [Actinobacillus minor
           NM305]
 gi|240295976|gb|EER46652.1| putative RND efflux membrane fusion protein [Actinobacillus minor
           NM305]
          Length = 402

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 82/262 (31%), Gaps = 39/262 (14%)

Query: 189 RALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           +  + S +   T+ + L      V++ DL   E         L+ +  +           
Sbjct: 79  QGAMLSAEASGTVSRVLVRSGQRVNKGDLL-VEFDSAVEVANLKASEAQLPAAKASYERY 137

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            +      A+       +L+  + T+   ++ +  L  T  ++ I +P +G I    + +
Sbjct: 138 RNLVASNSAS-----QAELDNAKATYNQLVANIESLRSTIARRKIYAPFSG-IAGIVNVN 191

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Y      +++ V       IR  +    I+ +  G    V            F A I
Sbjct: 192 VGQYISTGTEIVR-VEDQSSMKIRFTLPQTDIEKINVGQRVNVEIDALPGQT---FSARI 247

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA--EVLFTAKNTTLA-- 423
             IDP + +    +             +    D   +L +G  A   V    + + +   
Sbjct: 248 AAIDPAVDRLTGLINL-----------EAVLEDGQNKLLSGMFARLSVELPTEESQIIVP 296

Query: 424 ------------QEIIHPITDN 433
                         ++ P++DN
Sbjct: 297 QIVVTYTMYGETVYVLQPLSDN 318



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/124 (11%), Positives = 48/124 (38%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V +G ++ +G  L+ F+       +   +  +   +   +  ++ +   +  
Sbjct: 88  SGTVSRVLVRSGQRVNKGDLLVEFDSAVEVANLKASEAQLPAAKASYERYRNLVASNSAS 147

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              L+ A  +  + + +      +   +      S +   + + + +  S     + +E+
Sbjct: 148 QAELDNAKATYNQLVANIESLRSTIARRKIYAPFSGIAGIVNVNVGQYISTGTEIVRVED 207

Query: 184 KSSL 187
           +SS+
Sbjct: 208 QSSM 211


>gi|161984965|ref|YP_407312.2| macrolide transporter subunit MacA [Shigella boydii Sb227]
 gi|320183183|gb|EFW58041.1| Macrolide-specific efflux protein MacA [Shigella flexneri CDC
           796-83]
          Length = 371

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAEIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAEIKRNQASLDTAKTN 180


>gi|39935776|ref|NP_948052.1| FusE-MFP/HlyD family membrane protein [Rhodopseudomonas palustris
           CGA009]
 gi|39649629|emb|CAE28151.1| possible FusE-MFP/HlyD family membrane fusion protein
           [Rhodopseudomonas palustris CGA009]
          Length = 300

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 74/231 (32%), Gaps = 24/231 (10%)

Query: 204 NLFEKNAVSQNDLN------QQERIVYKSTLELRENIHEQ--KNMLRHINELYDEANLEF 255
            + +   V + D+       +    V  +  ++     +   +       +     ++  
Sbjct: 62  PIADNQYVKRGDVLYEIDPERLRLAVALAEADVEAKYQDMLVRQATAQRKQQLKLNDVVS 121

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L++ S         +   ++   + +    +  I SP+ G +   +     +YA   
Sbjct: 122 QEALQQSSGAAAMATAAYQAALATRDLAKLNLARSVIRSPVDGYVTNLKLR-PGDYATAG 180

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID---- 371
              + I+      +I       ++Q ++ G  A V+   +        ++I   I+    
Sbjct: 181 VTNVAIL-DGASFWITGYFEETKLQQIRVGAPARVKLMGFDQPAAGHVESIGRGIENSNE 239

Query: 372 -------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                  P ++   + ++  +   V + +  +    + +EL  G  A V  
Sbjct: 240 TPGRFGLPNVAATFSWVRLAQRIPVRIHLDRV---PSGVELAAGMTATVEI 287


>gi|117928657|ref|YP_873208.1| RND family efflux transporter MFP subunit [Acidothermus
           cellulolyticus 11B]
 gi|117649120|gb|ABK53222.1| efflux transporter, RND family, MFP subunit [Acidothermus
           cellulolyticus 11B]
          Length = 622

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/350 (12%), Positives = 102/350 (29%), Gaps = 39/350 (11%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D ++      +  +    +  ID  +   D L  + D  ++  + +         +    
Sbjct: 194 DSQSLAQAVDQARNQAAQQLGIDQAQLNADTLQLQNDTAKEQTDCQASSPACPADQLAVA 253

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             +V      +   +            + +  L+N+ + L     +   D   + N    
Sbjct: 254 RDQVAVANDQAKVAADGSPTDDYSEATVVQNALQNEQATLAKDQQTITSDQQAVSN--AS 311

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           +AV+     +Q+ I             +Q+     +N    E N         ++ D++ 
Sbjct: 312 DAVAAAQTAEQQGIAKDKQA---IAAAQQQVANAQLNAQITE-NSNAQKTAPPLASDVDS 367

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL- 327
            +       S++   ++  +  T+ +P  GTI    + S             I   +   
Sbjct: 368 AEAAVEQAQSQVDTAQQALDATTLTAPADGTI-GAINGSVGETISGGNT-ASITASTANS 425

Query: 328 ------------------TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
                               + A +       +  G  ATV          K+F A + +
Sbjct: 426 SSSGSAVAAFITLTNLTNLQVVANIDEADAAKIHTGSPATVTLNALP---GKEFSAHVLE 482

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +    +  +N ++    Y+V   +     +     ++ G  A V      
Sbjct: 483 VADTATVANNVVE----YQVTFSLDQSDPA-----VKPGMTANVTVVTAE 523



 Score = 43.5 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 27/273 (9%), Positives = 80/273 (29%), Gaps = 18/273 (6%)

Query: 35  SILLPIEISVSSSGEI---------LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLL 85
           S   P+  +  + G +         +   N + +    SG + +  V  G ++ QG  L 
Sbjct: 35  SANTPVRTTTVAMGTVMSTISATGNVTAPNDIAVNFATSGKLTEIDVTVGERVTQGQVLA 94

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             +  +    +   +  + + +  +   +     L  +   L       +        + 
Sbjct: 95  RLDATQAKANLAAAQAQLASAQAKLAELEQGPTALQQQGYQLANQQAQAQVT---QANQQ 151

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            +  ++   +   ++  ++     +++         + K +     L+            
Sbjct: 152 LANANQALQFDEQNLAAAVTKAQQQLQQAQAQLAADQQKYTTDSQSLAQAVDQARNQA-- 209

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            ++  + Q  LN     +   T + + +                   +  AN   +++ D
Sbjct: 210 AQQLGIDQAQLNADTLQLQNDTAKEQTDCQASSPACPADQLAVARDQVAVANDQAKVAAD 269

Query: 266 LEQN----QRTFADEMSKLTILEKTREQKTILS 294
                   + T      +       ++Q+TI S
Sbjct: 270 GSPTDDYSEATVVQNALQNEQATLAKDQQTITS 302


>gi|330446500|ref|ZP_08310152.1| efflux transporter, RND family, MFP subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328490691|dbj|GAA04649.1| efflux transporter, RND family, MFP subunit [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 385

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 67/211 (31%), Gaps = 25/211 (11%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           F+   V +      +    K+  +L +           +  + +    +     K+   +
Sbjct: 76  FKDGDVVKKGQTIAKLDSSKAKADLDKAASSLTTARNKVKRVIELNKKQPGALSKQDFEE 135

Query: 266 LEQNQR-TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS--SNYAQQSQPLMKIV 322
           L+       AD   +  IL+       I +P  G      +F+    +      PL+ I 
Sbjct: 136 LQDAANLAAADYRQQQAILKDYI----ITAPFDG---ELTNFTKSKGSMIDAITPLVSIY 188

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
            +     +   ++   +    KG   TV    Y D+    F  +++ + P +++      
Sbjct: 189 -NLDPVEVSYTISQNDLGKAVKGQPITVTVEAYKDMT---FNGVVDYVAPAVNKNTG--- 241

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                   + I      + N  L  G  A+V
Sbjct: 242 -------RVAI-HARIENPNHVLAPGMFAQV 264



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/93 (10%), Positives = 28/93 (30%), Gaps = 3/93 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +     ++G  + +G  +   +  +    +D    S+   R  +   K  ++    + 
Sbjct: 69  GKLVSINFKDGDVVKKGQTIAKLDSSKAKADLDKAASSLTTARNKV---KRVIELNKKQP 125

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             L K      +   +     +     +    I
Sbjct: 126 GALSKQDFEELQDAANLAAADYRQQQAILKDYI 158


>gi|325521904|gb|EGD00614.1| RND family efflux transporter MFP subunit [Burkholderia sp. TJI49]
          Length = 357

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 55/182 (30%), Gaps = 35/182 (19%)

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L E SR   +        ++ L    K +    + SP +G +               Q L
Sbjct: 187 LLEASRARMRALSIPDGIIASLDRTGKAQTHVLLTSPESGVVSELNVR-DGAMVAPGQTL 245

Query: 319 MKIVPHSKL-TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            KI   SKL   +   +       V+ G T       +A    + F   I +I P IS  
Sbjct: 246 AKIAGLSKLWLIVE--IPEALALGVQPGMTVD---ATFAGDPTQHFNGRIREILPGISTT 300

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGF-----------------PAEVLFTAKNT 420
              LQ        L+I      +   +L  G                  P+E + T    
Sbjct: 301 SRTLQ------ARLEID-----NAGFKLTPGMLMRVRVAGQKAVSRLLVPSEAVITTGKR 349

Query: 421 TL 422
           ++
Sbjct: 350 SV 351



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTF 87
           SP SG++ +  V +G+ +  G  L   
Sbjct: 222 SPESGVVSELNVRDGAMVAPGQTLAKI 248


>gi|317969797|ref|ZP_07971187.1| ABC transporter [Synechococcus sp. CB0205]
          Length = 302

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 6/166 (3%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L      +      L  +I  Q+  +    E   E        L+E   +L   +  
Sbjct: 100 RPGLLADLAAINARIGTLDRSIAMQRREVSRYREASREGAASMV-LLEEKQDELVTFEGQ 158

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +++   +E   +   + SPI GT+   + ++     +     +  V  S      A
Sbjct: 159 RRQALAEKRGIEVDLKDSQLRSPIDGTV--LRVYARPG-ERPGSDGILSVGASDRMEAIA 215

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +V    I  ++ G +A+            K KA + +I P I Q+D
Sbjct: 216 EVYESDIGRIRLGQSAS--LISENGGFSGKLKAEVLRISPQIRQRD 259



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 86/253 (33%), Gaps = 9/253 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGI-----IKKFQVENGSQILQGTPLLTFED----IET 92
            SVS+ G +    +V ++ +P   +     I    V+ G ++ +G  L TF++    +  
Sbjct: 47  ESVSALGRLEPAGDVRKLAAPMGSMGGSPRISGLSVQEGDRVKRGQILATFDNRPGLLAD 106

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              I+ +  ++         E S     + +        E ++++L+ F G+     ++ 
Sbjct: 107 LAAINARIGTLDRSIAMQRREVSRYREASREGAASMVLLEEKQDELVTFEGQRRQALAEK 166

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               +      L+  +         R      S  + ++ +S + +        +   + 
Sbjct: 167 RGIEVDLKDSQLRSPIDGTVLRVYARPGERPGSDGILSVGASDRMEAIAEVYESDIGRIR 226

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
                         + +L+  +      +R  + L  +   +    + E+   L+     
Sbjct: 227 LGQSASLISENGGFSGKLKAEVLRISPQIRQRDVLSTDPTGDADARIVEVRLALDPADAK 286

Query: 273 FADEMSKLTILEK 285
              ++S L ++ +
Sbjct: 287 RVQQLSGLKVIAR 299


>gi|302879390|ref|YP_003847954.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
 gi|302582179|gb|ADL56190.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
          Length = 402

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 89/276 (32%), Gaps = 37/276 (13%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLL--RALLSSHQKDLTMMKNLFEKNAV-------SQN 214
           L  +     +I + +L+L+ ++  +   A + ++Q  L  +        +        + 
Sbjct: 65  LSAEEVERAAIKVEKLELQAQAVQVVVTATIQANQDRLAHVAPRMAGRIIKVSANLGDKV 124

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L Q   ++    L    + + Q      + +   E             +D  + +  + 
Sbjct: 125 KLGQALAVLDSIELGDARSSYLQAVSESEVAQAGFERAQRLNADNIIPEKDFLRTRAEYE 184

Query: 275 DEMSKLTILEKTREQKTI------------LSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + L           +             +PIAG I+  ++      AQ    L   V
Sbjct: 185 KARAALRAAGDKLRMMGVVPEKLQGSAFPLTAPIAGIIIEKKAV-LGELAQPDSSLFT-V 242

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                 +I + +  K I  +K G  A V    Y  +    FK  +  I  +++++   + 
Sbjct: 243 ADLSKLWIESDLFDKDIGKIKLGAKADVTVSAYPGV---VFKGQLTYISSMMNKETRTI- 298

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                +  +++ +L     +  L+    A V    +
Sbjct: 299 -----KARVEVPNL-----DGRLKPEMFASVAINTE 324


>gi|154343303|ref|XP_001567597.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134064929|emb|CAM43039.1| hypothetical protein, unknown function [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 1645

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/209 (10%), Positives = 67/209 (32%), Gaps = 9/209 (4%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL---LD 140
           L      +  ++       +  L+  ++ E+       +     E A + R  +L   + 
Sbjct: 654 LQRAHATQVAEVQQAHAAQVAELQQRLEVERDHAAANQSTAAECESALQQRLSELRTSMA 713

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE------NKSSLLRALLSS 194
              + H +         ++    ++       +    RL++E      N+S+      + 
Sbjct: 714 AEREQHESRVAELQRAHATQVAEVQQAHATQVAELQQRLEVERDHAAANQSTAAECESAL 773

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q+   +  ++  +    ++ + + +R       EL++ +  +++          E    
Sbjct: 774 QQRLSELRTSMAAEREQHESRVAELQRAHATQVAELQQRLEVERDHAAANQSTAAECESA 833

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTIL 283
               L E+   +   +      +++L   
Sbjct: 834 LQQRLSELRTSMAAEREQHESRVAELQRA 862



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/209 (10%), Positives = 67/209 (32%), Gaps = 9/209 (4%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL---LD 140
            L      +  ++       +  L+  ++ E+       +     E A + R  +L   + 
Sbjct: 859  LQRAHATQVAEVQQAHATQVAELQQRLEVERDHAAANQSTAAECESALQQRLSELRTSMA 918

Query: 141  FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE------NKSSLLRALLSS 194
               + H +         ++    ++       +    RL++E      N+S+      + 
Sbjct: 919  AEREQHESRVAELQRAHATQVAEVQQAHAAQVAELQQRLEVERDHAAANQSTAAECESAL 978

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             Q+   +  ++  +    ++ + + +R       EL++ +  +++          E    
Sbjct: 979  QQRLSELRTSMAAEREQHESRVAELQRAHAAQVAELQQRLEVERDHAAANQSTAAECESA 1038

Query: 255  FANYLKEISRDLEQNQRTFADEMSKLTIL 283
                L E+   +   +      +++L   
Sbjct: 1039 LQQRLSELHTSMAAEREQHESRVAELQRA 1067



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/213 (10%), Positives = 69/213 (32%), Gaps = 6/213 (2%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L      +  ++       +  L+  ++ E+       +     E A + R  +L     
Sbjct: 726 LQRAHATQVAEVQQAHATQVAELQQRLEVERDHAAANQSTAAECESALQQRLSEL----R 781

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTM 201
              +   +     ++ + R+   ++  ++       D    N+S+      +  Q+   +
Sbjct: 782 TSMAAEREQHESRVAELQRAHATQVAELQQRLEVERDHAAANQSTAAECESALQQRLSEL 841

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             ++  +    ++ + + +R       E+++    Q   L+   E+  +      +   E
Sbjct: 842 RTSMAAEREQHESRVAELQRAHATQVAEVQQAHATQVAELQQRLEVERDHAAANQSTAAE 901

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               L+Q        M+      ++R  +   +
Sbjct: 902 CESALQQRLSELRTSMAAEREQHESRVAELQRA 934



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/209 (10%), Positives = 68/209 (32%), Gaps = 6/209 (2%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +    +L       +  L+  ++ E+       +     E A + R  +L        +
Sbjct: 525 HESRVAELQRAHAAQVAELQQRLEVERDHAAANQSTAAECESALQQRLSEL----RTSMA 580

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNL 205
              +     ++ + R+   ++  ++       D    N+S+      +  Q+   +  ++
Sbjct: 581 AEREQHESRVAELQRAHAAQVAELQQRLEVERDHAAANQSTAAECESALQQRLSELRTSM 640

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +    ++ + + +R       E+++    Q   L+   E+  +      +   E    
Sbjct: 641 AAEREQHESRVAELQRAHATQVAEVQQAHAAQVAELQQRLEVERDHAAANQSTAAECESA 700

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILS 294
           L+Q        M+      ++R  +   +
Sbjct: 701 LQQRLSELRTSMAAEREQHESRVAELQRA 729



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 14/150 (9%), Positives = 51/150 (34%), Gaps = 2/150 (1%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLS 193
           +Q +  L    +   +     ++ + R+   ++  ++       D    N+S+      +
Sbjct: 508 QQHISSLTHSMAAEREQHESRVAELQRAHAAQVAELQQRLEVERDHAAANQSTAAECESA 567

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             Q+   +  ++  +    ++ + + +R       EL++ +  +++          E   
Sbjct: 568 LQQRLSELRTSMAAEREQHESRVAELQRAHAAQVAELQQRLEVERDHAAANQSTAAECES 627

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                L E+   +   +      +++L   
Sbjct: 628 ALQQRLSELRTSMAAEREQHESRVAELQRA 657



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 74/200 (37%), Gaps = 8/200 (4%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L      +  ++       +  L+  ++ E+       +     E A + R  +L     
Sbjct: 931  LQRAHATQVAEVQQAHAAQVAELQQRLEVERDHAAANQSTAAECESALQQRLSEL----R 986

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTM 201
               +   +     ++ + R+   ++  ++       D    N+S+      +  Q+   +
Sbjct: 987  TSMAAEREQHESRVAELQRAHAAQVAELQQRLEVERDHAAANQSTAAECESALQQRLSEL 1046

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              ++  +    ++ + + +R       EL++    + N+LR  +        +  ++LKE
Sbjct: 1047 HTSMAAEREQHESRVAELQRAHAAQVAELQQ--GRELNVLRDESAEKFWVTSQPVDWLKE 1104

Query: 262  ISRDLEQNQRTFADEMSKLT 281
             +  L+   R + ++ +++T
Sbjct: 1105 ENESLKVQVREWEEKHTEVT 1124



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 21/210 (10%), Positives = 61/210 (29%), Gaps = 3/210 (1%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                 +     +  +  LR  +  E+   +    +      A  +  +Q L+    + +
Sbjct: 557 NQSTAAECESALQQRLSELRTSMAAEREQHESRVAELQRAHAAQVAELQQRLEVERDHAA 616

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNL 205
                     S++ + L    T M +          E + +    +    Q     +  L
Sbjct: 617 ANQSTAAECESALQQRLSELRTSMAAEREQHESRVAELQRAHATQVAEVQQAHAAQVAEL 676

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            ++  V ++     +    +    L++ + E +  +    E ++    E          +
Sbjct: 677 QQRLEVERDHAAANQSTAAECESALQQRLSELRTSMAAEREQHESRVAELQRAHATQVAE 736

Query: 266 LEQNQR-TFADEMSKLTILEKTREQKTILS 294
           ++Q      A+   +L +           +
Sbjct: 737 VQQAHATQVAELQQRLEVERDHAAANQSTA 766


>gi|83319756|ref|YP_424803.1| hypothetical protein MCAP_0861 [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
 gi|83283642|gb|ABC01574.1| conserved hypothetical protein [Mycoplasma capricolum subsp.
           capricolum ATCC 27343]
          Length = 753

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 78/198 (39%), Gaps = 8/198 (4%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           + I+    I+     I+     +    ++++ L +K + ++K    ++ +  +   +   
Sbjct: 309 DLIKVKSEIENIDEQIRETENQLTESNNSINQLKDKIEKIKKTKNDKDSENQELDKELRK 368

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             S+V       + +  +  L   +S+   + +LE K   +       +++L  +++ +E
Sbjct: 369 KVSEV-----EKLLKENQEYLENNKSLTNRKTELEQKLEEVEKQNQLKEQELKTLESQYE 423

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE---ISR 264
           K +     L     +      EL   I  +K +++++         +     KE   I +
Sbjct: 424 KLSKEHTRLLALRILQNSEISELTNEITSKKIIVKNLETYTQSQKQQLEELNKEYKSIKQ 483

Query: 265 DLEQNQRTFADEMSKLTI 282
           +LE  Q+    + S+L+ 
Sbjct: 484 ELEAKQKELEQKNSELSA 501



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 84/237 (35%), Gaps = 20/237 (8%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E  + +I+S       + +     ++         +   +   I+L K   K+++  I  
Sbjct: 44  EKELKKIQS-------EIKNRE-DRVKFLDIKDIEDIKNSNTKIELLKKQEKDIKDRIVE 95

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTR- 170
           +   ++ LN          + R+EQ      + +    +   N    +++ S   +L   
Sbjct: 96  KNDKINNLNKNLSFFASQVKVRKEQKHRLETELNELKKQKRENDEKQALFNSEIERLESD 155

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE- 229
           + S      DL+ +    +  L+  +KD    +         + DL +QE      +L  
Sbjct: 156 LSSSNTIYNDLKKQIEAYKDELTKLEKDKENKQK--------KIDLLKQELNRKNYSLSV 207

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           L   I + K +   + +L  E N      +KE  +++    + F     +L  L  +
Sbjct: 208 LETKIQKHKELTAELLKLQQEQNT-LNKTIKEKQQEIVDKNKIFNTNQEQLKQLIDS 263


>gi|88857842|ref|ZP_01132484.1| hypothetical protein PTD2_10669 [Pseudoalteromonas tunicata D2]
 gi|88819459|gb|EAR29272.1| hypothetical protein PTD2_10669 [Pseudoalteromonas tunicata D2]
          Length = 399

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 50/130 (38%), Gaps = 11/130 (8%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGII--KKFQVENGSQILQGTPLLTFEDIETTDLI 96
           PI + V S G +  ++    +      I+      V+ G  + +G  L+  +  +    +
Sbjct: 52  PISLDVKSHGLVKAKEQTQLVAQVSGQIVEVSPLFVQ-GGFVKEGQVLVRIDPNDYEAAL 110

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK--------AFESREEQLLDFLGKYHST 148
              + S+   R  ++ E++       ++D + K            R+ QL + L +Y ++
Sbjct: 111 TEAEASLAQARSALEIERAQAHVAQAEWDRISKNSNESIPSELYLRKPQLAEKLARYRAS 170

Query: 149 CSKVFNYGIS 158
            + V     +
Sbjct: 171 EAAVKRATRN 180



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 63/186 (33%), Gaps = 17/186 (9%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLF-EKNAVSQNDLN------QQERIVYKSTLELRENIHE 236
           K+     L++     +  +  LF +   V +  +         E  + ++   L +    
Sbjct: 64  KAKEQTQLVAQVSGQIVEVSPLFVQGGFVKEGQVLVRIDPNDYEAALTEAEASLAQARSA 123

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE-------KTREQ 289
            +      +    E +    N  + I  +L   +   A+++++    E       +  E+
Sbjct: 124 LEIERAQAHVAQAEWDRISKNSNESIPSELYLRKPQLAEKLARYRASEAAVKRATRNLER 183

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH-VKKGYTA 348
             + +P    I   +S S  +          +V  +++  IR  V  K +Q+ V  G  +
Sbjct: 184 TFVKAPYDAIIAE-RSISLGSVVNPGS-FFGLVSATEVAEIRLPVPDKDLQYLVNHGLDS 241

Query: 349 TVRFPH 354
            V    
Sbjct: 242 NVTLSA 247


>gi|317482634|ref|ZP_07941648.1| SalY-type ABC antimicrobial peptide transport system permease
           component [Bifidobacterium sp. 12_1_47BFAA]
 gi|316915880|gb|EFV37288.1| SalY-type ABC antimicrobial peptide transport system permease
           component [Bifidobacterium sp. 12_1_47BFAA]
          Length = 1241

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 26/225 (11%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E    ++  K  + + R  +D  ++ L     K +      +    Q+   L       +
Sbjct: 414 EARTQLESGKTQLTSARKQLDAAQTELTANRTKIEQGITQIDQGMAQIDQMLPMIQQANN 473

Query: 151 KVFN------------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS-HQK 197
            +                I  +   L + +  + SI   R  L  K + L+    S  Q+
Sbjct: 474 LLAQLDPNIDLNSPTWQAIKQLLARLGITVPEVPSISDLRQQLTAKQTELQTQRDSLAQQ 533

Query: 198 DLTMMKNLFEKNAVSQNDLNQQ-------ERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + + L E  A +Q+ L+QQ       E+       +L     E +     +     +
Sbjct: 534 KADLQRTLNETIAPAQSTLDQQNAQLTAKEQEAAAGEAQLNTKSAELEANAATLETQSAQ 593

Query: 251 ANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              + A        L+E  R L++ ++  AD  +KL   +   + 
Sbjct: 594 LEAQAAQLASGKRQLEEGERQLKEGEQQLADGKAKLDDAQSALDA 638


>gi|260774862|ref|ZP_05883763.1| hypothetical protein VIC_000233 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609117|gb|EEX35275.1| hypothetical protein VIC_000233 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 354

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 67/205 (32%), Gaps = 21/205 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +  ++ Q + ++  +  + R ++ E +  L+       E              +++  + 
Sbjct: 76  ANQEVKQGQMLIQLNDDKARASVAEAQAYLKDEERKLREFE-RLVTRNAITQTEIDAQKT 134

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
           +     ++L           I +P +GT+     FS            ++V    L    
Sbjct: 135 SVEIAKARLDAANANLSDLHITAPFSGTV-GFVDFSLGKMVSAGD---ELVALDDLSVMQ 190

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +  +V  + +  + KG   T +   + D     F   +  ID  I+++  NL       V
Sbjct: 191 LDLQVPERYLSQISKGMKVTSKTAAWNDA---VFSGEVVGIDSRINEETLNL------RV 241

Query: 390 ILKITDLAFSDNNIELRNGFPAEVL 414
            +      F +    L+ G      
Sbjct: 242 RI-----HFDNPKQSLKPGMLVAAD 261



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 55/154 (35%), Gaps = 11/154 (7%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +  S+S  G++  E +V  + S  +G +    V+   ++ QG  L+   D +    +  
Sbjct: 42  QVSQSLSLVGKLEAEQSV-VVSSEVTGKVDVIAVKANQEVKQGQMLIQLNDDKARASVAE 100

Query: 99  KKVSI----------KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +  +          + L       ++ +D      ++ +   ++    L D       +
Sbjct: 101 AQAYLKDEERKLREFERLVTRNAITQTEIDAQKTSVEIAKARLDAANANLSDLHITAPFS 160

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            +  F         S   +L  +  + + +LDL+
Sbjct: 161 GTVGFVDFSLGKMVSAGDELVALDDLSVMQLDLQ 194


>gi|255601769|ref|XP_002537747.1| Macrolide-specific efflux protein macA precursor, putative [Ricinus
           communis]
 gi|223515235|gb|EEF24635.1| Macrolide-specific efflux protein macA precursor, putative [Ricinus
           communis]
          Length = 346

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 70/205 (34%), Gaps = 18/205 (8%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN--YLKEISRDLEQNQRTFADEMS 278
             + ++  +L       K                + +   L +  R+++  Q       +
Sbjct: 102 AQIRQADAQLASARASLKLAQATHQRNQSLLAQNYISPLALDQSKREVDVAQANIQLAQA 161

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP---LMKIVPHSKLTYIRAKVT 335
           +L   +   +   I SPI G I+  ++         S     L +I        I   V+
Sbjct: 162 QLARAQADLDNSVIRSPIDGVIIK-RTVDLGQTVAASFTTPQLFQIARDLTKMQIDTSVS 220

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              +  +K+G  A      Y D   K+F A + +   + +   N++ T   Y V+L +  
Sbjct: 221 EADVGSLKEGQEARFVVDAYPD---KEFNARMRQF-RLAANVVNSVVT---YNVVLDVD- 272

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNT 420
               + +  L+ G  A+V     N 
Sbjct: 273 ----NKDELLKPGMTAQVRLLVGNR 293



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 1/83 (1%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
              I  +V+++G I     ++ I S  SG + + + +    + +G  LL  +       I
Sbjct: 46  TGNITQTVTATGTINPVA-LINIGSQVSGTVSELKADFNDHVTKGQVLLKLDPTIFNAQI 104

Query: 97  DLKKVSIKNLRCHIDTEKSALDF 119
                 + + R  +   ++    
Sbjct: 105 RQADAQLASARASLKLAQATHQR 127


>gi|209885804|ref|YP_002289661.1| secretion protein HlyD [Oligotropha carboxidovorans OM5]
 gi|209874000|gb|ACI93796.1| secretion protein HlyD [Oligotropha carboxidovorans OM5]
          Length = 386

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 51/156 (32%), Gaps = 20/156 (12%)

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              ++Q Q  F    + +   E    QK + +P  G  +  +      +         IV
Sbjct: 150 QATVDQAQAAFDQASASVAKTEAVISQKLVRAPFDGQ-LGVRRVEVGQFLSAGT---LIV 205

Query: 323 PHSKLTYIRAKVTP--KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             + L+ + A +T   K    +  G    +    Y       FK  I  I+P IS +  N
Sbjct: 206 TLTDLSRVYANITVTEKDRAIIDVGQDVELTVDAYPGRT---FKGKITTIEPQISPETRN 262

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                   V ++ T     +    L+ G  A V   
Sbjct: 263 --------VRVQAT---LDNPEHLLKPGMFATVSVV 287



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 3/121 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---L 120
           SG +       G+ + +G PL+   D      +   K    N +  +D  K+ L      
Sbjct: 90  SGRVTDILFTAGASVKKGDPLVQLFDAPDQADLVSYKAQTLNAQLALDRAKALLARSFGP 149

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
               D  + AF+     +            +    G   V R    +     ++ +   D
Sbjct: 150 QATVDQAQAAFDQASASVAKTEAVISQKLVRAPFDGQLGVRRVEVGQFLSAGTLIVTLTD 209

Query: 181 L 181
           L
Sbjct: 210 L 210


>gi|188991429|ref|YP_001903439.1| RND superfamily multidrug resistance protein [Xanthomonas
           campestris pv. campestris str. B100]
 gi|167733189|emb|CAP51387.1| RND superfamily multidrug resistance protein [Xanthomonas
           campestris pv. campestris]
          Length = 377

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 64/177 (36%), Gaps = 17/177 (9%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + + +  LR +   Y  A       L     D++Q +    +  ++  +        T+
Sbjct: 114 AVAQSEAQLRKLENSYRRATQLVGQQLVSA-ADVDQLKFDVENSRAQHRLASLELSYTTV 172

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +PI+G I      +  N+ Q + P+ +IV           V  +++  +K G   T+  
Sbjct: 173 QAPISGVIASRSIKT-GNFVQINTPIFRIV-DDSQLEATLNVPERELATLKSGQPVTLLA 230

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                   ++F   +++I P+++           + V+      AF      L+ G 
Sbjct: 231 DALP---GQQFVGKVDRIAPVVNSGSGT------FRVV-----CAFGAGAEALQPGM 273



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 4/161 (2%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  +        + +  SG+     VE G ++  G  L+  +       +   +  ++
Sbjct: 65  TGTAALEPRAEAQVV-AKTSGVALAVMVEEGQKVSAGQALVRLDPDRAHLAVAQSEAQLR 123

Query: 105 NLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            L   +    +     L +  DV +  F+    +    L     + + V    IS V  S
Sbjct: 124 KLENSYRRATQLVGQQLVSAADVDQLKFDVENSRAQHRLASLELSYTTV-QAPISGVIAS 182

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +K      I      + +  S L A L+  +++L  +K+
Sbjct: 183 RSIKTGNFVQINTPIFRIVDD-SQLEATLNVPERELATLKS 222


>gi|83718248|ref|YP_438311.1| FusE-MFP/HlyD family membrane protein [Burkholderia thailandensis
           E264]
 gi|167614751|ref|ZP_02383386.1| possible FusE-MFP/HlyD family membrane fusion protein [Burkholderia
           thailandensis Bt4]
 gi|257141340|ref|ZP_05589602.1| FusE-MFP/HlyD family membrane protein [Burkholderia thailandensis
           E264]
 gi|83652073|gb|ABC36137.1| possible FusE-MFP/HlyD family membrane fusion protein [Burkholderia
           thailandensis E264]
          Length = 299

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/218 (11%), Positives = 66/218 (30%), Gaps = 26/218 (11%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +  +  +L     E    +R         ++      ++ +  +E+ +   A   +   
Sbjct: 85  ALEHAQADLASQQAELDEAVREDRRNRALPDVVATESTEQGATRVEKLRAAVAQARAARD 144

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           +     E+  + +P+ GT+          Y    +  M +V + +   +       ++  
Sbjct: 145 LAALNLERTRVRAPVDGTVTNVGLL-PGVYLSAGKGAMALV-NDRSLRVEGYFEETKLPA 202

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY-------------- 387
           +  G  A+V    Y      + +  ++ I   +  ++      +                
Sbjct: 203 IHVGDPASV----YLMGIASEIRGHVQSIAGGVEDRERAGGAAQLANVNPAFTWVRLAQR 258

Query: 388 -EVILKITDLAFSDNNIELRNGFPAEVLF--TAKNTTL 422
             V + I  +      + L  G  A V     A + T+
Sbjct: 259 IPVRVAIDSV---PPGLRLVPGQTASVEIHARAGDVTV 293



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 56/158 (35%), Gaps = 6/158 (3%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLI--TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +KR  P     +T   ++ I+G I   W     IE      G++  +  VV I     G+
Sbjct: 1   MKRTIPLLRTCLTAAILVTILGAIYALWIRY-QIEPLTR-DGKVRAD--VVPIAPDVGGL 56

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +   +V +  ++ +G  LL  +       ++  +  + + +  +D             DV
Sbjct: 57  VTDVRVHDNQKVTKGQVLLVIDPSRYRIALEHAQADLASQQAELDEAVREDRRNRALPDV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           +      +    ++ L    +      +    ++ R+ 
Sbjct: 117 VATESTEQGATRVEKLRAAVAQARAARDLAALNLERTR 154


>gi|157157920|ref|YP_001462076.1| macrolide transporter subunit MacA [Escherichia coli E24377A]
 gi|157160401|ref|YP_001457719.1| macrolide transporter subunit MacA [Escherichia coli HS]
 gi|161986561|ref|YP_309842.2| macrolide transporter subunit MacA [Shigella sonnei Ss046]
 gi|170020719|ref|YP_001725673.1| macrolide transporter subunit MacA [Escherichia coli ATCC 8739]
 gi|187733837|ref|YP_001880924.1| macrolide transporter subunit MacA [Shigella boydii CDC 3083-94]
 gi|188495713|ref|ZP_03002983.1| macrolide-specific efflux protein MacA [Escherichia coli 53638]
 gi|191167593|ref|ZP_03029404.1| macrolide-specific efflux protein MacA [Escherichia coli B7A]
 gi|193064677|ref|ZP_03045756.1| macrolide-specific efflux protein MacA [Escherichia coli E22]
 gi|193071767|ref|ZP_03052663.1| macrolide-specific efflux protein MacA [Escherichia coli E110019]
 gi|209918127|ref|YP_002292211.1| macrolide transporter subunit MacA [Escherichia coli SE11]
 gi|218553464|ref|YP_002386377.1| macrolide transporter subunit MacA [Escherichia coli IAI1]
 gi|218694352|ref|YP_002402019.1| macrolide transporter subunit MacA [Escherichia coli 55989]
 gi|218700607|ref|YP_002408236.1| macrolide transporter subunit MacA [Escherichia coli IAI39]
 gi|256021001|ref|ZP_05434866.1| macrolide transporter subunit MacA [Shigella sp. D9]
 gi|260843129|ref|YP_003220907.1| macrolide transporter subunit, membrane fusion protein component
           [Escherichia coli O103:H2 str. 12009]
 gi|260854170|ref|YP_003228061.1| macrolide transporter subunit, membrane fusion protein component
           [Escherichia coli O26:H11 str. 11368]
 gi|260867051|ref|YP_003233453.1| macrolide transporter subunit, membrane fusion protein component
           [Escherichia coli O111:H- str. 11128]
 gi|293409257|ref|ZP_06652833.1| macrolide transporter subunit [Escherichia coli B354]
 gi|293433176|ref|ZP_06661604.1| HlyD family secretion protein [Escherichia coli B088]
 gi|300817020|ref|ZP_07097239.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           107-1]
 gi|300823616|ref|ZP_07103743.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           119-7]
 gi|300921090|ref|ZP_07137474.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           115-1]
 gi|300922547|ref|ZP_07138648.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           182-1]
 gi|301020526|ref|ZP_07184610.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           69-1]
 gi|301328608|ref|ZP_07221669.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           78-1]
 gi|309795325|ref|ZP_07689743.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           145-7]
 gi|331651897|ref|ZP_08352916.1| macrolide-specific efflux protein MacA [Escherichia coli M718]
 gi|331662292|ref|ZP_08363215.1| macrolide-specific efflux protein MacA [Escherichia coli TA143]
 gi|331667252|ref|ZP_08368117.1| macrolide-specific efflux protein MacA [Escherichia coli TA271]
 gi|331676666|ref|ZP_08377362.1| macrolide-specific efflux protein MacA [Escherichia coli H591]
 gi|332282227|ref|ZP_08394640.1| macrolide-specific efflux protein macA [Shigella sp. D9]
 gi|157066081|gb|ABV05336.1| macrolide-specific efflux protein MacA [Escherichia coli HS]
 gi|157079950|gb|ABV19658.1| macrolide-specific efflux protein MacA [Escherichia coli E24377A]
 gi|169755647|gb|ACA78346.1| efflux transporter, RND family, MFP subunit [Escherichia coli ATCC
           8739]
 gi|187430829|gb|ACD10103.1| macrolide-specific efflux protein MacA [Shigella boydii CDC
           3083-94]
 gi|188490912|gb|EDU66015.1| macrolide-specific efflux protein MacA [Escherichia coli 53638]
 gi|190902354|gb|EDV62092.1| macrolide-specific efflux protein MacA [Escherichia coli B7A]
 gi|192927734|gb|EDV82349.1| macrolide-specific efflux protein MacA [Escherichia coli E22]
 gi|192954924|gb|EDV85431.1| macrolide-specific efflux protein MacA [Escherichia coli E110019]
 gi|209911386|dbj|BAG76460.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218351084|emb|CAU96788.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli 55989]
 gi|218360232|emb|CAQ97782.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli IAI1]
 gi|218370593|emb|CAR18400.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli IAI39]
 gi|257752819|dbj|BAI24321.1| macrolide transporter subunit, membrane fusion protein component
           [Escherichia coli O26:H11 str. 11368]
 gi|257758276|dbj|BAI29773.1| macrolide transporter subunit, membrane fusion protein component
           [Escherichia coli O103:H2 str. 12009]
 gi|257763407|dbj|BAI34902.1| macrolide transporter subunit, membrane fusion protein component
           [Escherichia coli O111:H- str. 11128]
 gi|291323995|gb|EFE63417.1| HlyD family secretion protein [Escherichia coli B088]
 gi|291469725|gb|EFF12209.1| macrolide transporter subunit [Escherichia coli B354]
 gi|300398659|gb|EFJ82197.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           69-1]
 gi|300411941|gb|EFJ95251.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           115-1]
 gi|300421093|gb|EFK04404.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           182-1]
 gi|300523816|gb|EFK44885.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           119-7]
 gi|300530372|gb|EFK51434.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           107-1]
 gi|300845000|gb|EFK72760.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           78-1]
 gi|308120975|gb|EFO58237.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           145-7]
 gi|315060164|gb|ADT74491.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli W]
 gi|320202273|gb|EFW76844.1| Macrolide-specific efflux protein MacA [Escherichia coli EC4100B]
 gi|323155748|gb|EFZ41917.1| macrolide-specific efflux protein macA [Escherichia coli EPECa14]
 gi|323159503|gb|EFZ45483.1| macrolide-specific efflux protein macA [Escherichia coli E128010]
 gi|323165815|gb|EFZ51601.1| macrolide-specific efflux protein macA [Shigella sonnei 53G]
 gi|323175500|gb|EFZ61095.1| macrolide-specific efflux protein macA [Escherichia coli 1180]
 gi|323379279|gb|ADX51547.1| efflux transporter, RND family, MFP subunit [Escherichia coli KO11]
 gi|323937985|gb|EGB34247.1| efflux transporter [Escherichia coli E1520]
 gi|324019032|gb|EGB88251.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           117-3]
 gi|324116092|gb|EGC10016.1| efflux transporter [Escherichia coli E1167]
 gi|331050175|gb|EGI22233.1| macrolide-specific efflux protein MacA [Escherichia coli M718]
 gi|331060714|gb|EGI32678.1| macrolide-specific efflux protein MacA [Escherichia coli TA143]
 gi|331065608|gb|EGI37501.1| macrolide-specific efflux protein MacA [Escherichia coli TA271]
 gi|331075355|gb|EGI46653.1| macrolide-specific efflux protein MacA [Escherichia coli H591]
 gi|332104579|gb|EGJ07925.1| macrolide-specific efflux protein macA [Shigella sp. D9]
 gi|332342266|gb|AEE55600.1| macrolide-specific efflux protein MacA [Escherichia coli UMNK88]
          Length = 371

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|308496705|ref|XP_003110540.1| CRE-MYO-5 protein [Caenorhabditis remanei]
 gi|308243881|gb|EFO87833.1| CRE-MYO-5 protein [Caenorhabditis remanei]
          Length = 1960

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/217 (8%), Positives = 78/217 (35%), Gaps = 5/217 (2%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVSIKNLRC-HIDTEKSALDFLNNKYDVLEKAFESREEQ 137
             +       ++++ +  ++ K+          ++ + + +   +++   L +   +  + 
Sbjct: 1230 EKNDKQREVDELQQSADVEAKQRQTCERMAKQLEAQLTDITLKSDEQARLIQEL-TMSKN 1288

Query: 138  LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                  +  +   +     +S++ R  + +  +M  +         +     + +S++Q 
Sbjct: 1289 KTHSENQDLNRQLEDAESQLSALNRIKQQQHNQMEELKRTLDQETRERQSFHSQVSNYQL 1348

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +   ++   E+   ++ D+   +R + K+  E+++   + +       E  +E   +  +
Sbjct: 1349 ECEQLRESLEEEQDAKTDV---QRQLSKANSEIQQWRAKFEGEGVSRAEELEETRRKLTH 1405

Query: 258  YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             ++E+   LE   +           L    E   + +
Sbjct: 1406 KVQEMQEQLENANQKIGTLEKNKQRLAHDLEDAQVDA 1442



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 68/212 (32%), Gaps = 8/212 (3%)

Query: 74   NGSQILQGTPL------LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
             G  + +   L      LT +  E  + ++     I  L  +       L+      D  
Sbjct: 1386 EGEGVSRAEELEETRRKLTHKVQEMQEQLENANQKIGTLEKNKQRLAHDLEDAQVDADRA 1445

Query: 128  EKAFESREEQLLDFLGKYHSTCS--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                 S E++   F           +     +    R  +   T    +     +   ++
Sbjct: 1446 NSIASSLEKKQKGFDKVLEEWRRKCEALVAEVEQSQRETRAAATETFRLRNQLEESGEQT 1505

Query: 186  SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              ++    +  ++L  + +   +   S +DL +  R +     EL++ + E +  L    
Sbjct: 1506 EAVKRENKALAQELKDIADQLGEGGKSVHDLQKLRRRLEIEKEELQQALDEAECALEAEE 1565

Query: 246  ELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                 A +E +    EI + L++ +  F +  
Sbjct: 1566 AKVMRAQIEVSQIRSEIEKRLQEKEEEFENTR 1597



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 67/202 (33%), Gaps = 6/202 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E     + K+  ++     ++ EK AL     +        E R  +LL          +
Sbjct: 871  EEKTQEERKRKDMEAENARLEAEKQALLIQLEQERDSSAEGEERSAKLLSQKADLEKQMA 930

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM----MKNLF 206
               N  +          + + + I  +   L+   S L   +   + +       +++L 
Sbjct: 931  N-LNDQLCDEEEKNAALVKQKKKIEQDNEGLKKTVSDLETTIKKQESEKQAKDHQIRSLQ 989

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            ++   SQ+++  +     K   E+   + E            ++   +  + L EI   L
Sbjct: 990  DE-IQSQDEVISKLNKEKKHQEEVNRKLLEDIQAEEDKVNHLNKTKAKLESTLDEIEDTL 1048

Query: 267  EQNQRTFADEMSKLTILEKTRE 288
            E+ +R   D   +   +E   +
Sbjct: 1049 EREKRGRQDCEKQKRKVEGELK 1070



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 68/206 (33%), Gaps = 15/206 (7%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                   + +   ++  ++     LD          +  + RE +L     K        
Sbjct: 1136 RQSRSKAEKARNEMQLELEELGDRLDEAGGATQAQIELNKKREAEL----AKLRQDLEDA 1191

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                 +S+    K     +  +      ++     L    +  Q+++     L +   V 
Sbjct: 1192 AINAETSMAALRKKHNDAVAELSDQLDTVQKMRGKLEREKNDKQREVD---ELQQSADVE 1248

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
                   ER+  +   +L  +I  + +    + +    +  +  +  ++++R LE  +  
Sbjct: 1249 AKQRQTCERMAKQLEAQL-TDITLKSDEQARLIQELTMSKNKTHSENQDLNRQLEDAESQ 1307

Query: 273  FA-------DEMSKLTILEKTREQKT 291
             +        + +++  L++T +Q+T
Sbjct: 1308 LSALNRIKQQQHNQMEELKRTLDQET 1333


>gi|296135600|ref|YP_003642842.1| efflux transporter, RND family, MFP subunit [Thiomonas intermedia
           K12]
 gi|295795722|gb|ADG30512.1| efflux transporter, RND family, MFP subunit [Thiomonas intermedia
           K12]
          Length = 382

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/123 (12%), Positives = 40/123 (32%), Gaps = 12/123 (9%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V  G Q+  G  L   + ++  + I  ++ ++ + +  +   ++  DF   + 
Sbjct: 73  GRVKSLDVHVGDQVRAGQVLGEMDPVDLDERIRSQRAALLSTQAQLRQAQTQRDFARTQA 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
               +   +            H T  ++       +  +         ++   R DL   
Sbjct: 133 TRYAQLLAA------------HGTTEELLATRQQELQSAEAALQAAQDAVERARADLAAL 180

Query: 185 SSL 187
            + 
Sbjct: 181 QAQ 183



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/164 (10%), Positives = 49/164 (29%), Gaps = 5/164 (3%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q +    ++  +       +   L   +   +E        L+     L+  Q       
Sbjct: 115 QAQLRQAQTQRDFARTQATRYAQLLAAHGTTEELLATRQQELQSAEAALQAAQDAVERAR 174

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + L  L+  R    +++P AG +   +     +      P+++++      +I  +    
Sbjct: 175 ADLAALQAQRSNLKLVAPTAGLVTA-RDADPGSTVVAGAPVVELI-APDSLWIDTRFDQL 232

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
               +  G  A +          +     + ++DP+        
Sbjct: 233 TATGLAAGLPARIVL---RSRSNQTLAGRVLRVDPVADAVTEET 273


>gi|217325931|ref|ZP_03442015.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. TW14588]
 gi|217322152|gb|EEC30576.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. TW14588]
          Length = 380

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 120 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRN 179

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 180 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 238

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 239 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 291

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 292 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 330



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 55  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 113

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++   L D      +T   V    I +
Sbjct: 114 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDL--DTAATEMAVKQAQIGT 171

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 172 IDAQIKRNQASLDTAKTN 189


>gi|86749356|ref|YP_485852.1| secretion protein HlyD [Rhodopseudomonas palustris HaA2]
 gi|86572384|gb|ABD06941.1| Secretion protein HlyD [Rhodopseudomonas palustris HaA2]
          Length = 404

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 53/141 (37%), Gaps = 3/141 (2%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           +  IE +V +SG +     +V + +  SG +   +V  G ++  G  +   + +   + +
Sbjct: 42  IADIEDTVLASGTLKPI-KMVAVGAQVSGRVTSLKVRVGDRVRLGDQIAQIDPVTKQNDL 100

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              + +++N+R     +++ L             F  +     DF         K     
Sbjct: 101 RTAEAALQNMRAQRAEKEATLALAEASLARHNVTFAQKATSRADFESA--EATVKQTRAQ 158

Query: 157 ISSVYRSLKMKLTRMRSIYLN 177
           I+++   +   +  + +  +N
Sbjct: 159 IAALDAQITESIVSVENARVN 179



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 12/147 (8%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHI--------NELYDEANLEFANY-LKEIS 263
           QNDL   E  +     +  E           +         +    A+ E A   +K+  
Sbjct: 97  QNDLRTAEAALQNMRAQRAEKEATLALAEASLARHNVTFAQKATSRADFESAEATVKQTR 156

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             +        + +  +       +   I++PI GT++              Q    IV 
Sbjct: 157 AQIAALDAQITESIVSVENARVNLDYTRIIAPIDGTVLAV-VTQEGQTVNAVQSAPTIVI 215

Query: 324 HSK--LTYIRAKVTPKQIQHVKKGYTA 348
             +     IRA+++   +  ++ G   
Sbjct: 216 LGEVGTMTIRAEISEVDVIKIRPGQDV 242


>gi|227820010|ref|YP_002823981.1| multidrug resistance efflux pump [Sinorhizobium fredii NGR234]
 gi|36958624|gb|AAQ87092.1| Multidrug resistance efflux pump [Sinorhizobium fredii NGR234]
 gi|227339009|gb|ACP23228.1| multidrug resistance efflux pump [Sinorhizobium fredii NGR234]
          Length = 410

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 125/347 (36%), Gaps = 23/347 (6%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I +P  G I K     G+ + +G  L    +      +      + +LR    T +  +
Sbjct: 44  IINAPIDGEIAKPPPRIGTPVTEGETLAIIRNERVNRSV------LASLRAEQGTARERV 97

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             L  + D L    +   ++L  F     ++  +        V  S    +   +     
Sbjct: 98  AALRRERDELALLRDELAQRLGVFQSATIASLERQLRILEKRVEVSRAQDVVA-KVDLDR 156

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R +LE+K    R ++ S +          E + ++  DL QQ     +  + +   + + 
Sbjct: 157 RQELESKGIFTRKMVESAEAAGAATGGEVEISNLT-VDLLQQRLDALRQGIFV---MGDG 212

Query: 238 KNMLRHINELYDEANLEFAN---YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           +N + +  +  DE  +   +    + E      Q ++   +E  ++    +  EQ T+ S
Sbjct: 213 QNDVPYSRQRQDEVIVRINDLNTRIAENDTRAGQTEQQLIEEDKRV----RNLEQATVPS 268

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P +G +      S SN    ++ +++I+   +  ++   V       +  G  A VR   
Sbjct: 269 PFSGVVWSRNIVSGSNVMLNNE-MLRIL-DCRELFVDILVPEVDYDDIYPGREAEVRLFG 326

Query: 355 YADIREKKFKAIIEK---IDPIISQQDNNLQTQEYYEVILKITDLAF 398
            A++ + + +A+      ++      +     +    + + +T  A 
Sbjct: 327 RAEVFKGRVQAVKGSSAVVEKDSLAANEPETEERNARIRVALTPSAL 373


>gi|268554292|ref|XP_002635133.1| C. briggsae CBR-MYO-5 protein [Caenorhabditis briggsae]
          Length = 1904

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/217 (9%), Positives = 78/217 (35%), Gaps = 5/217 (2%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVSIKNLRC-HIDTEKSALDFLNNKYDVLEKAFESREEQ 137
             +       ++++ +  ++ K+          ++ + + +   +++   L +     + +
Sbjct: 1159 EKNDKQREVDELQQSADVEAKQRQNCERMAKQLEAQLTDITLKSDEQARLIQELTMSKNK 1218

Query: 138  LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            +       +          +S++ R  + +  +M  +         +   L + +S++Q 
Sbjct: 1219 IHSENHDLNRQLEDA-ESQLSALNRIKQQQHNQMEELKRTLDQETRERQSLHSQVSNYQL 1277

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +   ++   E+   ++ D+   +R + K+  E+++   + +       E  +E   +  +
Sbjct: 1278 ECEQLRESLEEEQDAKTDV---QRQLSKANSEIQQWRAKFEGEGVTRAEELEETRRKLTH 1334

Query: 258  YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             ++E+   LE   +           L    E   + +
Sbjct: 1335 KVQEMQEQLENANQKIGTLEKTKQRLAHDLEDAQVDA 1371



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/187 (11%), Positives = 67/187 (35%), Gaps = 1/187 (0%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E  +  + K  +++  +  +  +        ++ + +  + E +++   D + +      
Sbjct: 1341 EQLENANQKIGTLEKTKQRLAHDLEDAQVDADRANSIASSLEKKQKG-FDKVLEEWRRKC 1399

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     +    R  +   T    +     +   ++  ++    +  ++L  + +   +  
Sbjct: 1400 EALVAEVEQSQRETRAAATETFRLRNQLEESGEQTEAVKRENKALAQELKDIADQLGEGG 1459

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             S +DL +  R +     EL++ + E +  L         A +E +    EI + L++  
Sbjct: 1460 KSVHDLQKLRRRLEIEKEELQQALDEAECALEAEEAKVMRAQIEVSQIRSEIEKRLQEKD 1519

Query: 271  RTFADEM 277
              F +  
Sbjct: 1520 EEFENTR 1526



 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 67/202 (33%), Gaps = 6/202 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E     + K+  ++     ++ EK AL     +        E R  +LL          +
Sbjct: 853  EEKTQEERKRKDMEAENARLEAEKQALLIQLEQERDSSAEGEERSAKLLSQKADLEKQMA 912

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM----MKNLF 206
               N  +          + + + I  +   L+   S L   +   + +       +++L 
Sbjct: 913  N-LNDQLCDEEEKNAALVKQKKKIEQDNEGLKKTVSDLETTIKKQESEKQSKDHQIRSLQ 971

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            ++   SQ+++  +     K   E+   + E            ++   +  + L E+   L
Sbjct: 972  DE-IQSQDEVISKLNKEKKHQEEVNRKLLEDIQAEEDKVNHLNKTKAKLESTLDELEDTL 1030

Query: 267  EQNQRTFADEMSKLTILEKTRE 288
            E+ +R   D   +   +E   +
Sbjct: 1031 EREKRGRQDCEKQKRKVEGELK 1052



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 68/202 (33%), Gaps = 15/202 (7%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            +  + +   ++  ++     LD          +  + RE +L     K            
Sbjct: 1069 EQAEKARNEMQLELEELGDRLDEAGGATQAQIELNKKREAEL----AKLRQDLEDAAINA 1124

Query: 157  ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
             +S+    K     +  +      ++     L    +  Q+++     L +   V     
Sbjct: 1125 ETSMAALRKKHNDAVAELSDQLDTVQKMRGKLEREKNDKQREVD---ELQQSADVEAKQR 1181

Query: 217  NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA-- 274
               ER+  +   +L  +I  + +    + +    +  +  +   +++R LE  +   +  
Sbjct: 1182 QNCERMAKQLEAQL-TDITLKSDEQARLIQELTMSKNKIHSENHDLNRQLEDAESQLSAL 1240

Query: 275  -----DEMSKLTILEKTREQKT 291
                  + +++  L++T +Q+T
Sbjct: 1241 NRIKQQQHNQMEELKRTLDQET 1262



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 71/209 (33%), Gaps = 20/209 (9%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D E  +       +I++++  ++TE      L      LE      E  L          
Sbjct: 1519 DEEFENTRKNHSRTIESMQVSLETESRGRAELLKTKKKLEGDVNELEIALDHSNKLNVDG 1578

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
               +    +    R L++++   +       D  N +     +L   ++DL ++      
Sbjct: 1579 QKSI--KKLQDTIRELQLQVEEEQRSLNEVRDHANLAERRSQVLQQEKEDLAII------ 1630

Query: 209  NAVSQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
                     Q ER   ++ LEL E   +++E  N    +     +   +  +   E+   
Sbjct: 1631 -------YEQSERSRRQAELELAEVKDSVNELSNSNSLLLATKRKVEGDLQHLQSEVEEA 1683

Query: 266  LEQNQRTFADEMSKLTILEKTREQKTILS 294
            L       +D+ +K  I++ ++    + S
Sbjct: 1684 LSDA--KVSDDKAKKAIMDASKLADELRS 1710



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 75/200 (37%), Gaps = 10/200 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL--LDFLGKYHST 148
            +     +  K ++ +L   I  ++S     +++   L+   +S++E +  L+   K+   
Sbjct: 934  KIEQDNEGLKKTVSDLETTIKKQESEKQSKDHQIRSLQDEIQSQDEVISKLNKEKKHQEE 993

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK-------DLTM 201
             ++     I +    +         +     +LE+     +      +K       +L +
Sbjct: 994  VNRKLLEDIQAEEDKVNHLNKTKAKLESTLDELEDTLEREKRGRQDCEKQKRKVEGELKI 1053

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             + L E+    +++  Q E+   +  LEL E + ++ +      +   E N +    L +
Sbjct: 1054 AQELIEELNRHKHEQEQAEKARNEMQLELEE-LGDRLDEAGGATQAQIELNKKREAELAK 1112

Query: 262  ISRDLEQNQRTFADEMSKLT 281
            + +DLE         M+ L 
Sbjct: 1113 LRQDLEDAAINAETSMAALR 1132


>gi|330910660|gb|EGH39170.1| macrolide-specific efflux protein MacA [Escherichia coli AA86]
          Length = 357

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 97  LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRN 156

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 157 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 215

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 216 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKINDAIFYYARFEVP 268

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 269 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 307



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 32  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 90

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 91  EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNA--ATEMAVKQAQIGT 148

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 149 IDAQIKRNQASLDTAKTN 166


>gi|331659787|ref|ZP_08360725.1| putative membrane protein [Escherichia coli TA206]
 gi|315295939|gb|EFU55248.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 16-3]
 gi|331053002|gb|EGI25035.1| putative membrane protein [Escherichia coli TA206]
          Length = 355

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|307311734|ref|ZP_07591374.1| efflux transporter, RND family, MFP subunit [Escherichia coli W]
 gi|306908289|gb|EFN38788.1| efflux transporter, RND family, MFP subunit [Escherichia coli W]
          Length = 365

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 105 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 164

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 165 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 223

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 224 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 276

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 277 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 315



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 40  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 98

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 99  EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDL--DTAATEMAVKQAQIGT 156

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 157 IDAQIKRNQASLDTAKTN 174


>gi|293606339|ref|ZP_06688699.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292815199|gb|EFF74320.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 349

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/245 (12%), Positives = 79/245 (32%), Gaps = 21/245 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L   +    +++       +V E +  SR + L     +++    +    G+     +L 
Sbjct: 47  LTADVARVAASVPGRVAVLNVSESSLVSRGQVLFTIDPEFYRLQVEQAAAGLQMAEAALS 106

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
            +   + +   N      + +  +A      +    +  L  K  V++  +++   +   
Sbjct: 107 SRDRSVLAERSNASIAAEQVARAQANAQLSAQTWERLDALLPKGYVTRQQVDEAATLKRN 166

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +   L+E   +       I +                       Q   A+  + L I E+
Sbjct: 167 AQTSLKEAQAQLAAAQALIGDAAG-------------------AQALVAERRAALAIAER 207

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              +  + +P  G +      +  +Y   +Q    ++  +   +  A     ++  ++ G
Sbjct: 208 QLRETEVRAPFDGRVAGLSI-TVGDYMIPAQSAFSLI-DTTRWFATATFLETELPSIRPG 265

Query: 346 YTATV 350
             ATV
Sbjct: 266 VCATV 270


>gi|149926130|ref|ZP_01914392.1| Secretion protein HlyD [Limnobacter sp. MED105]
 gi|149824948|gb|EDM84160.1| Secretion protein HlyD [Limnobacter sp. MED105]
          Length = 366

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 56/188 (29%), Gaps = 19/188 (10%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLE--QNQRTFADEMSKLTILEKTREQKTIL 293
           E   +   +          F +  +   R L         +   ++L      R+   + 
Sbjct: 115 EHTQLKTDLERAKTLKQQNFISQAELDRRQLAFDAAGSRLSQARAQLNTQANQRQYGDLR 174

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G I    +  +       Q +++         +   V   ++  +K G  A+V   
Sbjct: 175 APGIGVISGVYA-EAGQVLAPGQAVVQWA-DENDVQVSMAVPENRVSEIKPGQEASVLL- 231

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                 ++   A + ++ P+             Y V+L + D A          G  A V
Sbjct: 232 ---WSGKQALAAKVREVSPVADPVTRT------YAVLLDVNDPARVSRF-----GMSATV 277

Query: 414 LFTAKNTT 421
            FT    +
Sbjct: 278 KFTTGAKS 285



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 35/117 (29%), Gaps = 3/117 (2%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G+I        +     G +    V+ G ++ +G  L   +  + +  +   +      
Sbjct: 54  PGQIEPRFQAK-LSFQVGGKLTARLVDVGDKVTKGQILAKIDPQDLSLALQAAQAQFDAA 112

Query: 107 RCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                  K+ L+      + + + +A   R +   D  G   S      N   +   
Sbjct: 113 ATEHTQLKTDLERAKTLKQQNFISQAELDRRQLAFDAAGSRLSQARAQLNTQANQRQ 169


>gi|321398660|emb|CAM71896.2| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 1529

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 77/225 (34%), Gaps = 16/225 (7%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            E+G +   G   L  ++      ++         R   + E+ A D    + +    A E
Sbjct: 958  EDGERQKAGNRQLASDNERLATELE---------RAQEEAERLAGDLEKAQEEAETLAAE 1008

Query: 133  SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRAL 191
             ++ Q      K  +      N  +++     + +  R+   +     + E  +  L+  
Sbjct: 1009 LQKAQEDGERQKADNRQLASDNERLATELERAQEEAERLAGDLEKAEEEAETLAGELQKA 1068

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                ++     + L   N     +L + +    +   +L +   E + +   + +  ++ 
Sbjct: 1069 QEDGERQKADNRQLASDNERLATELERAQEEAERLAGDLEKAEEEAETLAGELQKAQEDG 1128

Query: 252  NLEFANYLK------EISRDLEQNQRTFADEMSKLTILEKTREQK 290
              + A+  +       ++ +LE+ Q        +L   ++  E++
Sbjct: 1129 ERQKADNRQLASDNERLATELERAQEEAETLAGELQKAQEDGERQ 1173



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 71/201 (35%), Gaps = 7/201 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            D ++++ +  R   + E+ A D    + +    A E ++ Q      K  +      N  
Sbjct: 1029 DNERLATELERAQEEAERLAGDLEKAEEEAETLAGELQKAQEDGERQKADNRQLASDNER 1088

Query: 157  ISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +++     + +  R+   +     + E  +  L+      ++     + L   N     +
Sbjct: 1089 LATELERAQEEAERLAGDLEKAEEEAETLAGELQKAQEDGERQKADNRQLASDNERLATE 1148

Query: 216  LNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQN 269
            L + +        EL   +E+   QK   R +    +    E     +E  R   DLE+ 
Sbjct: 1149 LERAQEEAETLAGELQKAQEDGERQKADNRQLASDNERLATELERAQEEAERLAGDLEKA 1208

Query: 270  QRTFADEMSKLTILEKTREQK 290
            Q       ++L   ++  E++
Sbjct: 1209 QEEAETLAAELQKAQEDGERQ 1229



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 70/199 (35%), Gaps = 7/199 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            D ++++ +  R   + E+ A D    + +    A E ++ Q      K  +      N  
Sbjct: 861  DNERLATELERAQEEAERLAGDLEKAEEEAETLAAELQKAQEDGERQKADNRQLASDNER 920

Query: 157  ISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +++     + +  R+   +     + E  +  L+      ++     + L   N     +
Sbjct: 921  LATELERAQEEAERLAGDLEKAEEEAETLAGELQKAQEDGERQKAGNRQLASDNERLATE 980

Query: 216  LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK------EISRDLEQN 269
            L + +    +   +L +   E + +   + +  ++   + A+  +       ++ +LE+ 
Sbjct: 981  LERAQEEAERLAGDLEKAQEEAETLAAELQKAQEDGERQKADNRQLASDNERLATELERA 1040

Query: 270  QRTFADEMSKLTILEKTRE 288
            Q         L   E+  E
Sbjct: 1041 QEEAERLAGDLEKAEEEAE 1059



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 76/202 (37%), Gaps = 7/202 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            D ++++ +  R   + E+ A D    + +    A E ++ Q      K  +      N  
Sbjct: 1295 DNERLATELERAQEEAERLAGDLEKAQEEAERLAGELQKAQEDGERQKAGNRQLASDNER 1354

Query: 157  ISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +++     + +  R+   +   + + E  ++ L+      ++     + L   N     +
Sbjct: 1355 LATELERAQEEAERLAGDLEKAQEEAETLAAELQKAQEDGERQKADNRQLASDNERLATE 1414

Query: 216  LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK------EISRDLEQN 269
            L + +    +   +L++   + + +   +++++D+     A   +       ++ +LE+ 
Sbjct: 1415 LERAQEEAERLAGDLQKAQEDAETLTADLHKVHDDGERLTAELQRVHDDDERLAAELEKA 1474

Query: 270  QRTFADEMSKLTILEKTREQKT 291
            Q       + L    +  E+ T
Sbjct: 1475 QEEAETLAADLQKAHEDGERLT 1496



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 75/201 (37%), Gaps = 7/201 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            D ++++ +  R   + E  A +    + D   +  ++R+    +         ++     
Sbjct: 1141 DNERLATELERAQEEAETLAGELQKAQEDGERQKADNRQLASDNERLATELERAQEEAER 1200

Query: 157  ISS-VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++  + ++ +   T    +   + D E + +  R L S +++  T ++   E+      D
Sbjct: 1201 LAGDLEKAQEEAETLAAELQKAQEDGERQKADNRQLASDNERLATELERAQEEAERLAGD 1260

Query: 216  LNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQN 269
            L + E        EL   +E+   Q+   R +    +    E     +E  R   DLE+ 
Sbjct: 1261 LEKAEEEAETLAGELQKAQEDGERQRADNRQLASDNERLATELERAQEEAERLAGDLEKA 1320

Query: 270  QRTFADEMSKLTILEKTREQK 290
            Q        +L   ++  E++
Sbjct: 1321 QEEAERLAGELQKAQEDGERQ 1341



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 76/201 (37%), Gaps = 7/201 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            D ++++ +  R   + E+ A D    + +    A E ++ Q      K  +      N  
Sbjct: 1085 DNERLATELERAQEEAERLAGDLEKAEEEAETLAGELQKAQEDGERQKADNRQLASDNER 1144

Query: 157  IS-SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            ++  + R+ +   T    +   + D E + +  R L S +++  T ++   E+      D
Sbjct: 1145 LATELERAQEEAETLAGELQKAQEDGERQKADNRQLASDNERLATELERAQEEAERLAGD 1204

Query: 216  LNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQN 269
            L + +        EL   +E+   QK   R +    +    E     +E  R   DLE+ 
Sbjct: 1205 LEKAQEEAETLAAELQKAQEDGERQKADNRQLASDNERLATELERAQEEAERLAGDLEKA 1264

Query: 270  QRTFADEMSKLTILEKTREQK 290
            +        +L   ++  E++
Sbjct: 1265 EEEAETLAGELQKAQEDGERQ 1285



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 23/194 (11%), Positives = 71/194 (36%), Gaps = 6/194 (3%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-----RCHIDTEKSALDFLNNKYDVL 127
            E+G +   G   L  ++      ++  +   + L     +   + E  A +    + D  
Sbjct: 1336 EDGERQKAGNRQLASDNERLATELERAQEEAERLAGDLEKAQEEAETLAAELQKAQEDGE 1395

Query: 128  EKAFESREEQLLDFLGKYHSTCSKVFNYGISS-VYRSLKMKLTRMRSIYLNRLDLENKSS 186
             +  ++R+    +         ++     ++  + ++ +   T    ++    D E  ++
Sbjct: 1396 RQKADNRQLASDNERLATELERAQEEAERLAGDLQKAQEDAETLTADLHKVHDDGERLTA 1455

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L+ +    ++    ++   E+      DL +      + T +LR+  ++ + +   ++ 
Sbjct: 1456 ELQRVHDDDERLAAELEKAQEEAETLAADLQKAHEDGERLTADLRKLHNDDERLAPDLDR 1515

Query: 247  LYDEANLEFANYLK 260
              +EA    A+  K
Sbjct: 1516 AQEEAETLAADLQK 1529


>gi|305433140|ref|ZP_07402296.1| macrolide-specific efflux protein MacA [Campylobacter coli JV20]
 gi|304443841|gb|EFM36498.1| macrolide-specific efflux protein MacA [Campylobacter coli JV20]
          Length = 390

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 77/174 (44%), Gaps = 19/174 (10%)

Query: 18  KRMTLLSIIGIIGLITWSILLP----------------IEISVSSSGEILNEDNVVEIKS 61
           + + ++ I+ + G+  + I                   I  ++ + G++  +D V ++ +
Sbjct: 4   RVVLIVVILALFGVGAYFIFFNDNEKITYLTQKVKKIDISQTIEAVGKVYAKDQV-DVGA 62

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             SG I K  V+ GS + QG  +   +  +  + +D+ K  +++ + +++++K AL+  +
Sbjct: 63  QVSGQIIKLYVDVGSHVKQGDLIAQIDKDKQQNDLDITKAQLESAKANLESKKVALEIAS 122

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            +Y   +K + ++   L +   + ++  +      ++ +   +      +++  
Sbjct: 123 KQYQREQKLYAAKASSLENLETQKNNFYT--LKANVAELNAQVVQLEITLKNAQ 174



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 58/167 (34%), Gaps = 6/167 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q +  +      K  LE+    ++++  L        E      N    +  ++ +   
Sbjct: 102 AQLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNFYTLKANVAELNA 161

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHSKLTY 329
                   L   +K     TI +P+ G ++             +Q    IV   +     
Sbjct: 162 QVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVD-EGQTVNANQNTPTIVRIANLDQME 220

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           +R ++    +  +K G    + F   +D  +K ++A I  IDP  +Q
Sbjct: 221 VRMEIAEADVGKIKIG--TELDFSLLSD-PQKTYQASIASIDPADTQ 264


>gi|298506807|gb|ADI85530.1| efflux pump, RND family, membrane fusion protein [Geobacter
           sulfurreducens KN400]
          Length = 372

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 66/205 (32%), Gaps = 22/205 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++  L    +       +L   + E K    ++                    D +   
Sbjct: 91  VARGALL-LRQDTSNEEAQLPGALAEAKLARANLRRSDQLLAEGII-----AQADHDSAV 144

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            T     +++  +  T  +K+I +P +G  +  +  +     ++  P++ +       Y+
Sbjct: 145 ATANQAQAQVDNIRATIAKKSIRAPFSGR-LGIRQVNLGQILREGDPIVTLQ-SMDPIYV 202

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              +  +Q+  ++KG    V             +  +  I+P +  +  N++ Q      
Sbjct: 203 DFTLPQQQLPQLRKGLAVRVTGDALPGET---IEGRVTAINPEVDAESRNIKVQ------ 253

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF 415
                   ++   +LR G    V  
Sbjct: 254 -----ATVANRGEKLRPGMFVNVAV 273


>gi|294955720|ref|XP_002788646.1| hypothetical protein Pmar_PMAR010183 [Perkinsus marinus ATCC 50983]
 gi|239904187|gb|EER20442.1| hypothetical protein Pmar_PMAR010183 [Perkinsus marinus ATCC 50983]
          Length = 1850

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 72/222 (32%), Gaps = 23/222 (10%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D +  +   + +     LR  +    + +D L N    L++  E    +L +       +
Sbjct: 266 DTQLEEAARMAEEDKAALRAELAERTAKVDELQNSVHDLQEHVEDLTARLREAEAGRERS 325

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLN---RLDLENKSSLLRALLSSHQKDLTMMKNL 205
             ++    ++   +    +  R R+       R +LE K      LL   ++    M+  
Sbjct: 326 LQELSEATLTLKDQQKGAEEGRARADEEAESLRRELEAKELTYNNLLRQVEEMREHMEEQ 385

Query: 206 FEK-----------NAVSQNDLNQQERIVYKSTLE------LRENIHEQKNMLRHIN--- 245
            ++           +  S+ ++   +  + ++         L E + + +  L       
Sbjct: 386 AKELVAMATEKAAASIKSEEEVAHLKEQLQQAIGRSNLADGLEEELSDAQMALTEAQDRE 445

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              +EA  +  N L + S +L + +         L    +  
Sbjct: 446 SALEEAAEKAKNELAQASSELNELREEVTTLQETLAASRREV 487



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 81/254 (31%), Gaps = 9/254 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            + +   ++ +++    ++ E +  D L       E   E  ++ +     +     +  
Sbjct: 37  NEELQDMQMKLESAMERLNRESTLADQLRAALSNKEGEAEQLQQTVKMLQAENSRLNNSS 96

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            +    SV +       +   I   +  L+   +  +A +SS Q+     + L E+    
Sbjct: 97  TDGDGGSVKKLKNRIEEQEAKITALQSALQEAHAAKKASVSSVQQQ-EEYQGLREELGRL 155

Query: 213 QNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           Q  + + +  + +  +E   L+  + + K                    + E+  +L++ 
Sbjct: 156 QESVERYQAELQRREVENRELQGELADAKRADDEQRSDLSSRVESAEKIVSELREELQRA 215

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               A  + K     +  E+    SP  G +    S             M+  P      
Sbjct: 216 HEDEAATVGKYEARIEELERAN--SPKRGDVSSMASSYE--VVDLDPNTME-HPGDTQLE 270

Query: 330 IRAKVTPKQIQHVK 343
             A++  +    ++
Sbjct: 271 EAARMAEEDKAALR 284


>gi|188532450|ref|YP_001906247.1| p-hydroxybenzoic acid efflux subunit AaeA [Erwinia tasmaniensis
           Et1/99]
 gi|226706825|sp|B2VGW1|AAEA_ERWT9 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|188027492|emb|CAO95339.1| p-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux pump
           protein A) [Erwinia tasmaniensis Et1/99]
          Length = 310

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    ++  + L+ I  ++    W            + +     +VV I    SG+
Sbjct: 2   KTLTRKISRTVITLLLVIIAIVLIFRIWVFYTE----SPWTRDAKFTADVVAIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I + +V +   + +   L T +       +D  +  +   +  +  EK       N+  V
Sbjct: 58  ISEVRVRDNQLVQKDQVLFTIDPPRYQKALDEAQADVAYYQA-VMGEKRREAARRNQLGV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E+ E+   D+    H     V +  ++ +
Sbjct: 117 SAMSREAIEQANNDYQTTEHQLAKAVASRDLAQL 150



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/185 (10%), Positives = 69/185 (37%), Gaps = 13/185 (7%)

Query: 207 EKNAVSQNDLN------QQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFAN 257
           +   V ++ +       + ++ + ++  ++   +  + E++      N+L   A      
Sbjct: 65  DNQLVQKDQVLFTIDPPRYQKALDEAQADVAYYQAVMGEKRREAARRNQLGVSAMSR--E 122

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            +++ + D +  +   A  ++   + +   E+  + +P AG +     ++   +  +   
Sbjct: 123 AIEQANNDYQTTEHQLAKAVASRDLAQLDLERTVVKAPSAGWVTNLNVYT-GEFITRGST 181

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            + +V  +   Y+ A +   +++ ++ GY   +       +      +I   +    S  
Sbjct: 182 SVALVKQNS-FYVLAYLEETKLEGIRPGYRVEITPLGSNQVLRGSVDSIAAGVTNSSSTV 240

Query: 378 DNNLQ 382
           D+   
Sbjct: 241 DSKGM 245


>gi|149173548|ref|ZP_01852178.1| Secretion protein HlyD [Planctomyces maris DSM 8797]
 gi|148847730|gb|EDL62063.1| Secretion protein HlyD [Planctomyces maris DSM 8797]
          Length = 697

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 74/196 (37%), Gaps = 22/196 (11%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            +Y + +EL E  +  K M      +  E   +     ++   +L        +++++L 
Sbjct: 189 ELYSAQIELLEARNALKKMNSGSLAVVREVQEKLVTNSRQKLVELGMT----DEQINQLL 244

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL-TYIRAKVTPKQIQ 340
              K   + TI +PI GT+   +      Y +  +P+ +I   S +   +   + P+   
Sbjct: 245 TSGKAESRLTIYAPIGGTVTQ-KLAEEGKYIKAGEPIYRIANLSTVWLMLE--LYPENAS 301

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            ++ G               K  K  +  IDP +++    +       V ++     FS+
Sbjct: 302 RIRFGQVVEAELQSLP---GKTLKGRVVFIDPTVNKTRRTVG------VRVE-----FSN 347

Query: 401 NNIELRNGFPAEVLFT 416
            + +LR G  A+   T
Sbjct: 348 EHGQLRPGDYAKAQIT 363


>gi|332250124|ref|XP_003274203.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase
            beta-3 [Nomascus leucogenys]
          Length = 1234

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 85/227 (37%), Gaps = 18/227 (7%)

Query: 84   LLTFEDIETTDLIDLKKV----------SIKNLRCHIDTE---KSALDFLNNKYDVLE-K 129
            L+     +  DL +L+K            + +       E   +     L    DV + K
Sbjct: 963  LVKLRSRQERDLRELRKKHQRKAVTLTRRLLDGLAQAQAEGRCRPRPGALGGAADVEDMK 1022

Query: 130  AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              E   ++  +F  +   +  ++    + +  +     L R     L  + L+  ++  +
Sbjct: 1023 EGEDEAKRYQEFQNRQVQSLLELREAQVDAEAQRRLEHL-RQALQRLREVALDANTTQFK 1081

Query: 190  ALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L   ++++   ++ + ++   N++S+     + +   + T   R +I E  N +R + E
Sbjct: 1082 RLKEMNEREKKELQKILDRKRHNSISEAKTRDKHKKEAELTEINRRHITESVNSIRRLEE 1141

Query: 247  LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               + +       +++ + L + +     ++++    ++ R  + I 
Sbjct: 1142 AQKQRHDRLVAGQQQVLQQLAEEEPKLLAQLAQECQEQRARLPQEIR 1188


>gi|332529200|ref|ZP_08405164.1| RND family efflux transporter MFP subunit [Hylemonella gracilis
           ATCC 19624]
 gi|332041423|gb|EGI77785.1| RND family efflux transporter MFP subunit [Hylemonella gracilis
           ATCC 19624]
          Length = 369

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 48/160 (30%), Gaps = 11/160 (6%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE----ISRDLEQNQRTFADEMSKL 280
                    I     +    N    ++  +    L E        L Q   T     ++ 
Sbjct: 116 DELARFASEIPYAAALQAQANYENAKSEADRVRALGEEGIYSRSQLTQIYTTEKVAKAQW 175

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
              + T     +L+P  G I  ++  +          L ++V        RA+VTP +I 
Sbjct: 176 EAAQVTLAATRVLAPDDGVI-SSRGATVGAVVSSGNELFRMV-RQSRMEWRAEVTPAEIG 233

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
            VK G    V       +   + +  +  I P    Q  N
Sbjct: 234 RVKIGQQVEV-----TTVSGLEVQGTVRAIAPTADAQTRN 268


>gi|332533994|ref|ZP_08409845.1| ABC transporter permease [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036543|gb|EGI73010.1| ABC transporter permease [Pseudoalteromonas haloplanktis ANT/505]
          Length = 417

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 90/269 (33%), Gaps = 18/269 (6%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              +    + +  ++  + H+      +               S E   +D   K   T 
Sbjct: 41  TSHSAKSSISRSKVQVAKVHVKALIRDIAASGKIVAANAPKIYSPERGFIDLKVKAGDTV 100

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +     +      L  +L +  S+ L RL  E +   L+A     ++ LT+ K L    
Sbjct: 101 KQGDTLALLQ-SPELTNELKQQESV-LKRLQGEQQRQHLQA----RRQTLTLNKTL---- 150

Query: 210 AVSQNDLNQQERIVYKSTLELRE------NIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            ++Q +LN  ER   ++ L +++      ++ +  + L      Y  A  E       ++
Sbjct: 151 DMAQVELNAAERENRRAQLSIQKHLISQIDLEKAVDDLSRAKLSYKHAQQEVLLAKDTLA 210

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            +L+  +     +   +  L +     +I + + G +        +   Q  QPLM +V 
Sbjct: 211 FELQAAKSDVTRQQLIVDDLIRKVSNLSIKATVTGIVGNLLVQQKAAVTQS-QPLMTLV- 268

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
                    +V       +  G    ++ 
Sbjct: 269 DLSNFEAELQVPESYANELGLGMEVELKL 297



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 59/159 (37%), Gaps = 8/159 (5%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +++SG+I+  +    I SP  G I   +V+ G  + QG  L   +  E T+ +  ++  +
Sbjct: 68  IAASGKIVAANAPK-IYSPERGFI-DLKVKAGDTVKQGDTLALLQSPELTNELKQQESVL 125

Query: 104 KNL-----RCHIDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           K L     R H+   +  L          +E     RE +      + H          +
Sbjct: 126 KRLQGEQQRQHLQARRQTLTLNKTLDMAQVELNAAERENRRAQLSIQKHLISQIDLEKAV 185

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             + R+        + + L +  L  +    ++ ++  Q
Sbjct: 186 DDLSRAKLSYKHAQQEVLLAKDTLAFELQAAKSDVTRQQ 224


>gi|313675178|ref|YP_004053174.1| efflux transporter, rnd family, mfp subunit [Marivirga tractuosa
           DSM 4126]
 gi|312941876|gb|ADR21066.1| efflux transporter, RND family, MFP subunit [Marivirga tractuosa
           DSM 4126]
          Length = 352

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 19/198 (9%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKE----ISRDLEQNQRTFADEMSKLTI 282
            LE  E ++  +   + +N    E NLE    L +       +L+    ++ +       
Sbjct: 97  RLENEEFVNGLQVEGKKLNLELAENNLEKQKSLYDKGGVTQTELKNASISYVNAKYSYEN 156

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            E    +  +  P  G IV     ++     Q   L K++ ++    +  K+  K +  V
Sbjct: 157 AEIQLAKMAVRVPFDGVIVELPYHTNGIKIDQGTALFKVMEYNN-LLMDVKLPEKHLPEV 215

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
                  +   +Y    +   K  I +I PII  +    Q+            L  +++ 
Sbjct: 216 TLDQLVQI--TNYNMGND-TIKGKISQISPIIDPETRTFQSV-----------LQINNDK 261

Query: 403 IELRNGFPAEVLFTAKNT 420
             LR G   +    ++  
Sbjct: 262 HSLRPGMFIKAAILSEQR 279


>gi|301611453|ref|XP_002935255.1| PREDICTED: myosin-4-like [Xenopus (Silurana) tropicalis]
          Length = 1937

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 80/229 (34%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   L+  ID   S L+ ++     LEK     E+QL +   K 
Sbjct: 1208 QIDNLQRVKQKLEKEKS--ELKMEIDDLASNLENVSKAKANLEKVNRVIEDQLSEVKSKG 1265

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  V         F      + R ++ K + +  +   +     +   L+  L    
Sbjct: 1266 DEQQRLVNDLGAQRARFQTENGELSRQVEEKESLISQLSRGKQGFTQQIEELKRQLEEES 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+ ++ +    +      Y+   ++  
Sbjct: 1326 KAKNALAHALQSARHDSDLLREQYEEEQEAKAELQRSLSKANGEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTI--LEKTREQKTILSPIAGTIVYN 303
              L+E  + L Q  +   +++  +        + ++ + S +   +V  
Sbjct: 1386 EELEEAKKKLAQRLQEAEEQVEAVNSKCASLDKTKQRLQSEVEDLMVDV 1434



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 72/210 (34%), Gaps = 17/210 (8%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  +T + +  K   I  L+  I+ E++    L  K   L+   E  EE++         
Sbjct: 1074 DKQQTEEKLKKKDFEISQLQGKIEDEQTLGTQLQKKIKELQARIEELEEEIEAERAARAK 1133

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +     +S     +  +L         ++++  K            +   + ++L E
Sbjct: 1134 IEKQ--RADLSRELEEISERLEEAGGATSAQIEMNKKREA---------EFQKVRRDLEE 1182

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY------LKE 261
                 +       +    S  EL E I   + + + + +   E  +E  +       + +
Sbjct: 1183 ATLQHEATAGALRKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDLASNLENVSK 1242

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               +LE+  R   D++S++      +++  
Sbjct: 1243 AKANLEKVNRVIEDQLSEVKSKGDEQQRLV 1272



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 84/227 (37%), Gaps = 21/227 (9%)

Query: 85   LTFED-IETTDLIDLKKVSIKNL----RCHIDTEKSALDFLNNKYDVLEKAF--ESREEQ 137
            L  +D +   D +  +   I+      +  I+  ++AL+       + E+     S   Q
Sbjct: 1657 LQLDDAVRGQDDLKEQVAVIERRNNLQQAEIEENRAALEQTERSRKIAEQELLDASERVQ 1716

Query: 138  LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN----RLDLENKSSLLRALLS 193
            LL           K     +S +   ++  +   R+          D    +  L+    
Sbjct: 1717 LLHSQNTSLIGSKKKLEADLSQLQNEVEEAVQEARNAEEKAKKAITDAALMAEELKKEQD 1776

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIV----YKSTLELRENIHEQKNMLRHINELYD 249
            +      M KNL +     QN L++ E++      K   +L   + E +N L +  +   
Sbjct: 1777 TSAHLERMKKNLEQTVKDLQNRLDEAEQLAMKGGKKQLQKLESRVRELENELDNEQKRGV 1836

Query: 250  EA---NLEFANYLKEISRDLEQNQR---TFADEMSKLTILEKTREQK 290
            +A     ++   +KE++   E++++      D + KL +  K  +++
Sbjct: 1837 DAVKGVRKYERRVKELTYQTEEDRKNVLRLQDLVDKLQLKVKAYKRQ 1883


>gi|302878090|ref|YP_003846654.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
 gi|302580879|gb|ADL54890.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
          Length = 402

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 89/276 (32%), Gaps = 37/276 (13%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLL--RALLSSHQKDLTMMKNLFEKNAV-------SQN 214
           L  +     +I + +L+L+ ++  +   A + ++Q  L  +        +        + 
Sbjct: 65  LSAEEVERAAIKVEKLELQAQAVQVVVTATIQANQDRLAHVAPRMAGRIIKVSANLGDKV 124

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L Q   ++    L    + + Q      + +   E             +D  + +  + 
Sbjct: 125 KLGQALAVLDSIELGDARSSYLQAVSESEVAQAGFERAQRLNADNIIPEKDFLRTRAEYE 184

Query: 275 DEMSKLTILEKTREQKTI------------LSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + L           +             +PIAG I+  ++      AQ    L   V
Sbjct: 185 KARAALRAAGDKLRMMGVVPEKLQGSAFPLTAPIAGIIIEKKAV-LGELAQPDSSLFT-V 242

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                 +I + +  K I  +K G  A V    Y  +    FK  +  I  +++++   + 
Sbjct: 243 ADLSKLWIESDLFDKDIGKIKLGAKADVTVSAYPGV---VFKGQLTYISSMMNKETRTI- 298

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                +  +++ +L     +  L+    A V    +
Sbjct: 299 -----KARVEVPNL-----DGRLKPEMFASVAINTE 324


>gi|91793545|ref|YP_563196.1| secretion protein HlyD [Shewanella denitrificans OS217]
 gi|91715547|gb|ABE55473.1| secretion protein HlyD [Shewanella denitrificans OS217]
          Length = 352

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 79/204 (38%), Gaps = 25/204 (12%)

Query: 36  ILLPIEISVSSSGEILNE-DNVVEIKSPF--------SGIIKKFQVENGSQILQGTPLLT 86
            ++P+E ++   G + +       +++P         SG+++K  VE G ++ +G  L  
Sbjct: 35  FVVPVETALVGQGHVSSFYSTTATLEAPEEAHVLSRVSGLVEKILVEEGDRVTKGQVLAV 94

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            +        +  +  ++     I+ E + L+ +NNK  V + A    E  L     +  
Sbjct: 95  IDPKRQKYEFNRSEAEVQI----IEQELNRLNKINNKEFVSQDALAKLEFNLQAAKAQRD 150

Query: 147 STCSKVFNYGISSVYRSLKM-KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               K+ +  I+S    +   +L ++ ++     +L             +Q +L  + +L
Sbjct: 151 LAELKLKDSQITSPINGVVAHRLVKLGNMAKEFDEL---------FYIVNQDELHGIVHL 201

Query: 206 FEKNAVSQNDLNQQERIVYKSTLE 229
            E+   S      QE  V+    +
Sbjct: 202 PEQQLASLR--LGQEAKVFSQQSQ 223


>gi|23502223|ref|NP_698350.1| HlyD family secretion protein [Brucella suis 1330]
 gi|161619297|ref|YP_001593184.1| HlyD family secretion protein [Brucella canis ATCC 23365]
 gi|23348193|gb|AAN30265.1| HlyD family secretion protein [Brucella suis 1330]
 gi|161336108|gb|ABX62413.1| HlyD family secretion protein [Brucella canis ATCC 23365]
          Length = 355

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 152


>gi|78049521|ref|YP_365696.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78037951|emb|CAJ25696.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 414

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/135 (10%), Positives = 44/135 (32%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +     G +     + G ++ +G  L   +        D    + 
Sbjct: 64  ASALGTVT-ALNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAK 122

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +      N+      V     +++  Q+  +     +  +++ +  +   
Sbjct: 123 RQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVAANDAQMRSAQVQLQ 182

Query: 161 YRSLKMKLTRMRSIY 175
           +  +   +  +  I 
Sbjct: 183 FTRVTAPIDGIAGIR 197



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 53/146 (36%), Gaps = 5/146 (3%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEI 262
            +K   ++Q D    +    ++    R+N         +     D A  ++ +   L   
Sbjct: 97  VKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQ 156

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + Q +   A   +++   +   +   + +PI G I   +     N    S  ++ + 
Sbjct: 157 RNQVAQYEAAVAANDAQMRSAQVQLQFTRVTAPIDG-IAGIRGVDVGNIVTSSSTIVTLT 215

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTA 348
              +  Y+   +  +++Q V+ G TA
Sbjct: 216 -QIRPIYVSFNLPERELQAVRTGQTA 240


>gi|313668971|ref|YP_004049255.1| periplasmic protein [Neisseria lactamica ST-640]
 gi|313006433|emb|CBN87896.1| putative periplasmic protein [Neisseria lactamica 020-06]
          Length = 391

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQTALWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 31/263 (11%), Positives = 81/263 (30%), Gaps = 31/263 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        +    E      + L     ++ + +         +
Sbjct: 112 LVSAQIALGSAEKKYKRQTALWKDDATSKEDLESAQDALAAAKANVAELKALIRQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPK 337
              E       I + + GT+V             +Q    ++++  +  +   + ++   
Sbjct: 172 NTAESELGYTRITATMDGTVVAIPV-EEGQTVNAAQSTPTIIQLA-NLDMMLNKMQIAEG 229

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEV 389
            I  VK G    + F   ++      KA ++ +DP ++           +      YY  
Sbjct: 230 DITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYA 286

Query: 390 ILKITDLAFSDNNIELRNGFPAE 412
              +      + + +L  G   +
Sbjct: 287 RSFVP-----NPDGKLATGMTTQ 304


>gi|294673040|ref|YP_003573656.1| RND family efflux transporter MFP subunit [Prevotella ruminicola
           23]
 gi|294473940|gb|ADE83329.1| efflux transporter, RND family, MFP subunit [Prevotella ruminicola
           23]
          Length = 339

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 73/211 (34%), Gaps = 24/211 (11%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL------KEI 262
             V +  +N+ +  V +  L    +  + +N+L        +AN     Y          
Sbjct: 66  GVVKRMLVNEGQ-AVSRGQLIAEMDDTQARNLLSGAEAQMTQANDALTRYKMLHDNGSLP 124

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
                + Q   A   S+L + +K      +++P++G IV  +   +   A  SQ ++ I+
Sbjct: 125 EVQWVEIQSKVAQAKSQLEVAKKNLADCRLVAPVSG-IVGKRLVGAGETAMPSQAVVSIL 183

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  ++  +   +I  +    ++T++                 + D +         
Sbjct: 184 -DISTVKVKVAIPEAEISGIGANTSSTIKVEAVNGSFTGGRIEKGVQADALTHT------ 236

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
               Y++ + +     ++ N +L  G  A V
Sbjct: 237 ----YDIRIHV-----ANGNRKLLPGMVASV 258



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 22/54 (40%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           G++K+  V  G  + +G  +   +D +  +L+   +  +      +   K   D
Sbjct: 66  GVVKRMLVNEGQAVSRGQLIAEMDDTQARNLLSGAEAQMTQANDALTRYKMLHD 119


>gi|261250294|ref|ZP_05942870.1| membrane-fusion protein [Vibrio orientalis CIP 102891]
 gi|260939410|gb|EEX95396.1| membrane-fusion protein [Vibrio orientalis CIP 102891]
          Length = 360

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/178 (12%), Positives = 59/178 (33%), Gaps = 18/178 (10%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           ++   +  + E   +A     +   +        Q    +  + ++         ++ +P
Sbjct: 119 QRAQAMLKVKEKEYKAAQSLKSKGLQGEVAFSNAQAGLVEAKAMVSNARIALRNTSVTAP 178

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +G + +       ++     P+  ++   +   I A V+ + IQ +     A +RF   
Sbjct: 179 FSGVVDHLFI-EKGDFVGVGDPVATLI-DLEKIIIEADVSERHIQDLLANQQAKIRF--- 233

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             I  ++    +  I  + S   N               ++  ++   ++  G  AEV
Sbjct: 234 --INGQEAMGEVRYISRVSSASTNTF-----------PIEIEMANPEQKIPAGISAEV 278



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 55/157 (35%), Gaps = 4/157 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I + +V  G  + QG  +   +       ++++    + +    + E  A   L +K 
Sbjct: 87  GKIIQLKVRKGDSVKQGQVIALID----KGDLEIQLQRAQAMLKVKEKEYKAAQSLKSKG 142

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E AF + +  L++      +    + N  +++ +  +   L   +  ++   D    
Sbjct: 143 LQGEVAFSNAQAGLVEAKAMVSNARIALRNTSVTAPFSGVVDHLFIEKGDFVGVGDPVAT 202

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
              L  ++         +++L          +N QE 
Sbjct: 203 LIDLEKIIIEADVSERHIQDLLANQQAKIRFINGQEA 239



 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 51/124 (41%), Gaps = 2/124 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + +PFSG++    +E G  +  G P+ T  D+E   +I    VS ++++  +  +++ + 
Sbjct: 175 VTAPFSGVVDHLFIEKGDFVGVGDPVATLIDLE--KIIIEADVSERHIQDLLANQQAKIR 232

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           F+N +  + E  + SR               +       + +   + + L    +I +  
Sbjct: 233 FINGQEAMGEVRYISRVSSASTNTFPIEIEMANPEQKIPAGISAEVTLNLQDQLAIKITP 292

Query: 179 LDLE 182
             L 
Sbjct: 293 AMLA 296


>gi|239607841|gb|EEQ84828.1| RNA polymerase Rpb1 C-terminal repeat domain-containing protein
           [Ajellomyces dermatitidis ER-3]
          Length = 1439

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 72/209 (34%), Gaps = 8/209 (3%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
              +  +    +  K+  + + +  +   ++ L+    + +      E+ +E+L     +
Sbjct: 692 AELDATQAA--LTAKEEELTSKQEELTARQTELETTQGELETTTGELETTKEELEATRSE 749

Query: 145 YHSTCSKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             ST  K+      + S    L+     + S        + +    +  L + Q +L   
Sbjct: 750 LESTKGKLETTQGELESKKGELETTQGELESKKGELETTQGELESKKGELETTQGELESK 809

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           K   E    +Q +L  ++  +  +  EL     E ++    +    D+   +    LK  
Sbjct: 810 KGELE---TTQGELESKKGELETTQGELESKKGELESTQGELVTTKDDLEQKVKE-LKAK 865

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +LE  Q     +  +L  L++  E   
Sbjct: 866 QEELEAKQSELEAKQDELVALQRGLETTQ 894



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 60/204 (29%), Gaps = 8/204 (3%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             +     +        L+  I   +  L  L  K   +E++    +++  +        
Sbjct: 508 QAQMQKTANESAKECSKLKSRISELRLELGGLQEKQKDIEESLADAQKENDELSQLREDL 567

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              + N   +        +    +     +  L N+   L       + +      L  +
Sbjct: 568 QEDIDNLQRAIEDEKEAHEEELAKQREQEKEALVNQKQELEGYFQEIKNEDD---RLAAE 624

Query: 209 NAVSQNDLNQQERIVYKSTLEL-RENIHEQKNMLRHINELYDEANL-EFANYLKEI---S 263
              ++      ER   K+ LE  ++ + E K+ +    E   E+   +      E+    
Sbjct: 625 QLKAREQELTVERDKLKAELETEKQELQEAKDAMAADYEGKLESKQADIDTKQAEVDAKQ 684

Query: 264 RDLEQNQRTFADEMSKLTILEKTR 287
             LE  Q       + LT  E+  
Sbjct: 685 EQLEAKQAELDATQAALTAKEEEL 708


>gi|289209223|ref|YP_003461289.1| efflux transporter RND family, MFP subunit [Thioalkalivibrio sp.
           K90mix]
 gi|288944854|gb|ADC72553.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           K90mix]
          Length = 419

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 64/211 (30%), Gaps = 30/211 (14%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           RS +     + +        E     LRA     + +    + LFE+ AVS  ++ + E 
Sbjct: 120 RSREQARENLAAARSRLQSAEANLENLRAEARFAESEYRRHQELFERGAVSATEVERMET 179

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
              ++   +R      +     I                               E++   
Sbjct: 180 ARDRARSAVRAGESAVEVARSEIEGAR------------------------IVLEIASGQ 215

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
           + E   E  ++ SP++G ++              + ++ +V       ++  +       
Sbjct: 216 MPESETETLSVRSPVSGVVLERYRCCEGT-IGAGEAVL-VVGDLDDLEVQVDLLSMDAVR 273

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           V  G    VR       R+ + +  + ++ P
Sbjct: 274 VVPGM--RVRLT--DWGRDAELEGTVRRVQP 300



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 80/218 (36%), Gaps = 25/218 (11%)

Query: 18  KRMTLLSIIGIIGLITWSIL-------------LPIEISVSSSGEILNEDNVVEIKSPFS 64
           +    L ++  +  + W++               P E +V   G      +   + +P +
Sbjct: 28  RITVGLIVLAGVAALVWALRPQPVPVSLTTVEAGPFEETVREEGR-TRLRDTFTVSAPIA 86

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDL----IDLKKVSIKNLRCHIDTEKSALDFL 120
           G + + Q+E G  +  G  L   E + T  L     +  + ++   R  + + ++ L+ L
Sbjct: 87  GFLHRVQLEEGDAVELGDTLFRMEPLPTPALDVRSREQARENLAAARSRLQSAEANLENL 146

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +    E  +  R ++L +      +   ++         R+         ++ + R +
Sbjct: 147 RAEARFAESEYR-RHQELFERGAVSATEVERMETAR----DRARSAVRAGESAVEVARSE 201

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +E    +L   ++S Q   +  + L  ++ VS   L +
Sbjct: 202 IEGARIVLE--IASGQMPESETETLSVRSPVSGVVLER 237


>gi|194207158|ref|XP_001489622.2| PREDICTED: myosin heavy chain cardiac alpha [Equus caballus]
          Length = 1863

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 76/194 (39%), Gaps = 9/194 (4%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLG 143
            +  E  + ++ K  S++  +  +  E   L    +  N     L+K   + ++ L ++  
Sbjct: 1326 DAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAEWKQ 1385

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY  + S++      +  RSL  +L ++++ Y   L+        +    + Q+++  + 
Sbjct: 1386 KYEESQSELEASQKEA--RSLSTELFKLKNAYEESLE---HLETFKRENKNLQEEIADLT 1440

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                +   + ++L +  + +    LEL+  + E +  L H       A LEF     EI 
Sbjct: 1441 EQLAEGGKTVHELEKVRKQLEAEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKGEIE 1500

Query: 264  RDLEQNQRTFADEM 277
            R L +         
Sbjct: 1501 RKLAEKDEEMEQAK 1514



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 69/198 (34%), Gaps = 1/198 (0%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                 L+   + +    I   K+ L+ ++   +     + +R E+    L  + +  +K 
Sbjct: 1148 KSEFKLELDDVTSNMEQIIKAKANLEKVSRTLEDQANEYRTRLEEAQRSLNDFTTQRAK- 1206

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                   + R L+ K   +  +   +L    +   L+  L    K    + +  +     
Sbjct: 1207 LQTENGELSRQLEEKEALISQLTRGKLSYTQQMEDLKRQLEEEGKAKNALAHALQSARHD 1266

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             + L +Q     ++  EL+  + +  + +      Y+   ++    L+E  + L Q  + 
Sbjct: 1267 CDLLREQYEEEIEAKAELQRVLSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQD 1326

Query: 273  FADEMSKLTILEKTREQK 290
              + +  +     + E+ 
Sbjct: 1327 AEEAVEAVNAKCSSLEKT 1344



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 75/250 (30%), Gaps = 25/250 (10%)

Query: 57   VEIKSPFSGIIKKFQVE----------NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
             ++      + ++ +V            G   L    ++  E+ +      LKK   +  
Sbjct: 956  QQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKLQLEEKLKKKEFEIN 1015

Query: 107  RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            + +   E      L  +  + E      E +      +      +     +S     +  
Sbjct: 1016 QLNSKIEDEQALALQLQKKLKENQARIEELEEELEAERTARAKVEKLRSELSRELEEISE 1075

Query: 167  KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
            +L         +++L  K            +   M ++L E     +       +    S
Sbjct: 1076 RLEEAGGATSVQIELNKKREA---------EFQKMRRDLEEATLQHEATAAALRKKHADS 1126

Query: 227  TLELRENIHEQKNMLRHINELYDEANLEFANYLK------EISRDLEQNQRTFADEMSKL 280
              EL E I   + + + + +   E  LE  +         +   +LE+  RT  D+ ++ 
Sbjct: 1127 VAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNMEQIIKAKANLEKVSRTLEDQANEY 1186

Query: 281  TILEKTREQK 290
                +  ++ 
Sbjct: 1187 RTRLEEAQRS 1196



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 69/206 (33%), Gaps = 20/206 (9%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            + +     +  + + K L   +   + A++ +N K   LEK     + ++ D +      
Sbjct: 1303 ETDAIQRTEELEEAKKKLAQRLQDAEEAVEAVNAKCSSLEKTKHRLQNEIEDLM--VDVE 1360

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             S      +    R+    L   +  Y      E   S L A   S ++  ++   LF+ 
Sbjct: 1361 RSNAAAAALDKKQRNFDKILAEWKQKY------EESQSELEA---SQKEARSLSTELFKL 1411

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                +  L   E    +    L+E I +    L    +   E        L+++ + LE 
Sbjct: 1412 KNAYEESLEHLE-TFKRENKNLQEEIADLTEQLAEGGKTVHE--------LEKVRKQLEA 1462

Query: 269  NQRTFADEMSKLTILEKTREQKTILS 294
             +      + +     +  E K + +
Sbjct: 1463 EKLELQSALEEAEASLEHEEGKILRA 1488



 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 68/203 (33%), Gaps = 14/203 (6%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            +  +  +    ++      +N         T+ + +     K        E  ++ +   
Sbjct: 1657 MESDLTQLQSEVEEMVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQT 1716

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            +        +     +    + L+    R+R +     +LE +       +   +K    
Sbjct: 1717 IKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN---ELEVEQKRNVETVKGMRKSERR 1773

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +K L  +    + +L + + +V K  L++       K   R   E  ++AN   + + K 
Sbjct: 1774 IKELTYQTEEDKKNLLRLQDLVDKLQLKV-------KAYKRQAEEAEEQANTNLSKFRK- 1825

Query: 262  ISRDLEQNQRTFADEMSKLTILE 284
            +  +L++ +       S++  L 
Sbjct: 1826 VQHELDEAEERADIAESQVNKLR 1848


>gi|114640643|ref|XP_001162564.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 11 [Pan troglodytes]
          Length = 1377

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 24/229 (10%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++ +V     + +    L     E      L +   +  R  +  E+ A+D L  K 
Sbjct: 725 GRVEQLKVR----VKELEQQLQESAREAEMERALLQGEREAERALLQKEQKAVDQLQEKL 780

Query: 125 DVLEKAFE-SREEQLLDFLGKYHSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNR 178
             LE   +  R+++  +         ++          + +   S++ +L          
Sbjct: 781 VALETGIQKERDKERAELAAGRRHLEARQALYAELQTQLDNCPESVREQLQEQLRREAEA 840

Query: 179 LDLENKS-SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           L+ E K    L       +  +   + L  +  +             +S  EL  +I ++
Sbjct: 841 LETETKLFEDLEFQQLERESRVEEERELAGQGLL-------------RSKAELLRSIAKR 887

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           K  L  ++    +   +     + ++RD   + +    E  KLT+LE+ 
Sbjct: 888 KERLAILDSQAGQIRAQAVQESERLARDKNASLQLLQKEKEKLTVLERR 936



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 19/192 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +S+ +       + E    S EE L +      ST  +  +   + +   +         
Sbjct: 663 RSSEEPGVATQRLWESMERSDEENLKEECSSTESTQQEHEDAPSTKLQGEVLALEEERAQ 722

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-------------EKNAVSQND--LNQ 218
           +      L+ +   L   L    ++  M + L              E+ AV Q    L  
Sbjct: 723 VLGRVEQLKVRVKELEQQLQESAREAEMERALLQGEREAERALLQKEQKAVDQLQEKLVA 782

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFA 274
            E  + K   + R  +   +  L     LY E   +  N      +++   L +      
Sbjct: 783 LETGIQKERDKERAELAAGRRHLEARQALYAELQTQLDNCPESVREQLQEQLRREAEALE 842

Query: 275 DEMSKLTILEKT 286
            E      LE  
Sbjct: 843 TETKLFEDLEFQ 854


>gi|328781544|ref|XP_001121819.2| PREDICTED: myosin-XVIIIa [Apis mellifera]
          Length = 2049

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 66/201 (32%), Gaps = 10/201 (4%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  E  D +  +   ++  +  ++        +  +   + K  + R+E+L D  G    
Sbjct: 1640 DQEEELDDLAGQVQLLEQAKLRLEM------SIEQQRKEIRKEMQQRDEELEDVRGNALK 1693

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               K     + + +    + L     +    + +E +    RA  +     L   ++L  
Sbjct: 1694 KV-KALESQLENEHEERTILLREKHELERRLVAIEEQDRAERAAEAETMHRLK--RDLKR 1750

Query: 208  KNAVSQNDLNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              A+ ++     ER    ST +     +  Q            +A       L E    L
Sbjct: 1751 TKALLRDAQTMLERSKGDSTGKAALRQLKNQLEDAECARATAVKAKQALEQELNETQASL 1810

Query: 267  EQNQRTFADEMSKLTILEKTR 287
            E+ QR  ++   +  I  + R
Sbjct: 1811 EEAQRQRSEAEERANIASRER 1831



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 12/215 (5%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D E  D+       +K L   ++ E      L  +   LE+   + EEQ          T
Sbjct: 1681 DEELEDVRGNALKKVKALESQLENEHEERTILLREKHELERRLVAIEEQDRAERAAEAET 1740

Query: 149  CSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              ++        ++ R  +  L R +     +  L    + L     +    +   + L 
Sbjct: 1741 MHRLKRDLKRTKALLRDAQTMLERSKGDSTGKAALRQLKNQLEDAECARATAVKAKQALE 1800

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL-----EFANYLKE 261
            ++   +Q  L + +R   +S  E R NI  ++          +E  L     ++   +++
Sbjct: 1801 QELNETQASLEEAQRQ--RSEAEERANIASRERTELLSQLEENEEELAEVLKKYRAAVQQ 1858

Query: 262  ISR---DLEQNQRTFADEMSKLTILEKTREQKTIL 293
            +S     L++ Q   A   ++ + L+    + T  
Sbjct: 1859 VSAEQGQLQEAQVQIAALEAEKSALKDQLSELTQR 1893



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 72/227 (31%), Gaps = 23/227 (10%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-FESREEQLLDFLGK 144
              ED E      +K         + +T+ S  +    + +  E+A   SRE   L    +
Sbjct: 1781 QLEDAECARATAVKAKQALEQELN-ETQASLEEAQRQRSEAEERANIASRERTELLSQLE 1839

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +            +  + +  +  +++   +    LE + S L+  LS   + L  ++ 
Sbjct: 1840 ENEEELAEVLKKYRAAVQQVSAEQGQLQEAQVQIAALEAEKSALKDQLSELTQRLESVEQ 1899

Query: 205  L---------------FEKNAVSQNDL-----NQQERIVYKSTLELRENIHEQKNMLRHI 244
            L                 K   S+ +L      + E  + +   E  E +  +  +LR  
Sbjct: 1900 LGDPTANSLATRRLEFRAKELESKLELEQTTRARLETQIARLK-ESVEKLQTECALLRTK 1958

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +   + +      L+E   +         +       LEK+ E   
Sbjct: 1959 EQSAQDTSRRLQRSLREAREEASSALAREQESTRARRELEKSLEAAE 2005



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 61/200 (30%), Gaps = 22/200 (11%)

Query: 67   IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
            +++   E G                    +   +V I  L       K  L  L  + + 
Sbjct: 1856 VQQVSAEQGQ-------------------LQEAQVQIAALEAEKSALKDQLSELTQRLES 1896

Query: 127  LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +E+  +     L     +     +K     +     +     T++  +  +   L+ + +
Sbjct: 1897 VEQLGDPTANSLA---TRRLEFRAKELESKLELEQTTRARLETQIARLKESVEKLQTECA 1953

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            LLR    S Q     ++    +     +    +E+   ++  EL +++   +   +   +
Sbjct: 1954 LLRTKEQSAQDTSRRLQRSLREAREEASSALAREQESTRARRELEKSLEAAEAETKVARD 2013

Query: 247  LYDEANLEFANYLKEISRDL 266
                A     +    I  +L
Sbjct: 2014 DLRLALQRIDDLQSAIQGEL 2033



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 76/225 (33%), Gaps = 15/225 (6%)

Query: 84   LLTFEDIETTDLIDLKK----VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            LL  E     +L++ K+       +NL   +  EK+  + L  + ++      + E+ L 
Sbjct: 1532 LLLEEQTARNNLLEKKQRKFDSETQNLMNDLRQEKAQRERLAREKEIAIAEKFTIEQNLS 1591

Query: 140  DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
            D   +      ++         R+L  +L  +        ++         L    +   
Sbjct: 1592 DARLEIELKEERL---------RTLSQELEELTFGGKTEEEVAQLKKAKHELEKRVKDQE 1642

Query: 200  TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              + +L  +  + +    + E  + +   E+R+ + ++   L  +     +      + L
Sbjct: 1643 EELDDLAGQVQLLEQAKLRLEMSIEQQRKEIRKEMQQRDEELEDVRGNALKKVKALESQL 1702

Query: 260  KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            +    +     R   +   +L  +E+    +   +  A T+   +
Sbjct: 1703 ENEHEERTILLREKHELERRLVAIEEQDRAE--RAAEAETMHRLK 1745


>gi|323142281|ref|ZP_08077113.1| efflux transporter, RND family, MFP subunit [Phascolarctobacterium
           sp. YIT 12067]
 gi|322413165|gb|EFY04052.1| efflux transporter, RND family, MFP subunit [Phascolarctobacterium
           sp. YIT 12067]
          Length = 374

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 54/196 (27%), Gaps = 22/196 (11%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEAN--LEFANYLKEISRDLEQNQRTFADEMS 278
           + V  +  +L   I  QK    +                   + +  LE          +
Sbjct: 113 QSVEAANAQLASAIANQKLAADNAARFNKLYAGGAVSEATRDQYNTQLEAANAALRQAQA 172

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT-PK 337
                        + S   G +       +        P++ IV   +      ++  P+
Sbjct: 173 NANASGNQLSYTQLTSDADGVVAAITG-EAGQVTAAGTPMVTIVRSGER---EIQINVPE 228

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  +  G  A + F    D+     K  + +I PI             Y+V + +  L 
Sbjct: 229 NV-KLSVGQQAEISFWALPDVTA---KGTVREISPIADSITRT------YKVRVAVPQLP 278

Query: 398 FSDNNIELRNGFPAEV 413
            +        G  A+V
Sbjct: 279 AAAKL-----GMTAKV 289



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/123 (10%), Positives = 32/123 (26%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V  G ++  G  L+T +  +    ++     + +   +           N  Y
Sbjct: 84  GRIASRLVNVGDRVHAGQILMTIDPKDVNQSVEAANAQLASAIANQKLAADNAARFNKLY 143

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                +  +R++          +      N   S    S     +    +         +
Sbjct: 144 AGGAVSEATRDQYNTQLEAANAALRQAQANANASGNQLSYTQLTSDADGVVAAITGEAGQ 203

Query: 185 SSL 187
            + 
Sbjct: 204 VTA 206


>gi|330935021|ref|XP_003304801.1| hypothetical protein PTT_17477 [Pyrenophora teres f. teres 0-1]
 gi|311318457|gb|EFQ87120.1| hypothetical protein PTT_17477 [Pyrenophora teres f. teres 0-1]
          Length = 1571

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 80/207 (38%), Gaps = 9/207 (4%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV- 152
            D+++  +  +K L   I+ +   L  L N+ D   +  + +E++  +   +   T  ++ 
Sbjct: 878  DMLETTENKVKELEREIEAQTEDLQALANERDEALELLQDKEQECEELRQEALDTVQRLE 937

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
               +   +   R            +  + +++N S  L  L       L  ++NL  + +
Sbjct: 938  IDLDQKQTERDRLYNDLENTTEDFHALQQEMKNVSESLLQLEDDRDASLRKIQNLEAELS 997

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN------LEFANYLKEISR 264
             +  +LN+Q++++ +   +      + ++    I+ L +E         E  + L     
Sbjct: 998  DANEELNRQDKLLSEERSKNERLDVQLESCQGEIDFLREEQEGDKIKIGELESALNHTQA 1057

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
             L++ +    D   ++T   + R+   
Sbjct: 1058 TLQEARERARDLEERMTEERQQRDALE 1084



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 31/246 (12%), Positives = 73/246 (29%), Gaps = 37/246 (15%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY-DVLEKAF 131
            + G +I  G         + T  +   +   ++L   +  E+   D L  +    +EK  
Sbjct: 1038 QEGDKIKIGELESALNHTQAT--LQEARERARDLEERMTEERQQRDALETQEKQEVEKII 1095

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGIS-------------SVYRSLKMKLTRMRSIYLNR 178
                 QL     +       + +  +              ++  +L        S++ + 
Sbjct: 1096 TELNAQLSKLKEESRKLRKNLSSKEVEASTWKQRHDEFELALRETLGNPNGTRASLFKDI 1155

Query: 179  LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV----------SQNDLNQQERIVYKSTL 228
              L+         L + + DLT    L                  +++ ++ER   +  L
Sbjct: 1156 AKLQRDLQGAMQDLDTVRADLTEKDRLLRNRDTLLENTGMESRRLSEMLERERQARRQDL 1215

Query: 229  ELREN-----------IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               EN           I + ++ +  +  L  +      +  K+    L +         
Sbjct: 1216 SAWENAKRGHQSTVRAIQQHESRVLELETLRSQDRQRIHHMEKQYKEQLLERNNLLYALW 1275

Query: 278  SKLTIL 283
            ++L+ L
Sbjct: 1276 NRLSTL 1281



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/196 (10%), Positives = 66/196 (33%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +  + ++ +   +   R   +     L+    + D L +  E  + ++ +     + T +
Sbjct: 998  DANEELNRQDKLLSEERSKNERLDVQLESCQGEIDFLREEQEGDKIKIGELESALNHTQA 1057

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             +      +     +M   R +   L   + +    ++  L +   K     + L +  +
Sbjct: 1058 TLQEARERARDLEERMTEERQQRDALETQEKQEVEKIITELNAQLSKLKEESRKLRKNLS 1117

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              + + +  ++   +  L LRE +         + +   +   +    ++++        
Sbjct: 1118 SKEVEASTWKQRHDEFELALRETLGNPNGTRASLFKDIAKLQRDLQGAMQDLDTVRADLT 1177

Query: 271  RTFADEMSKLTILEKT 286
                   ++ T+LE T
Sbjct: 1178 EKDRLLRNRDTLLENT 1193


>gi|221639205|ref|YP_002525467.1| RND family efflux transporter MFP subunit [Rhodobacter sphaeroides
           KD131]
 gi|221159986|gb|ACM00966.1| Efflux transporter, RND family, MFP subunit precursor [Rhodobacter
           sphaeroides KD131]
          Length = 390

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 84/244 (34%), Gaps = 27/244 (11%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE + S   A L+S +  +   +    +   ++   ++ ER V + T +LR+     +  
Sbjct: 98  LELQKSQFTASLASARATIAQAE---AQVLEAKASADEAER-VNRRTAQLRQQGAASQAA 153

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                     AN           + LE  +   A   ++L  +E    + ++++P+AG I
Sbjct: 154 ADTAQAASVSANARVMV----ARQTLEAARAQVALAEAQLANIELQLNRTSVVAPVAGEI 209

Query: 301 VYNQSFSSSNYAQQ-SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           V  ++      A    +P+  ++       + A V  + +  ++ G T  +R        
Sbjct: 210 VS-RTAKVGAIASAQGEPMFTLL-RDGQLELFADVAEQDLLRLRPGQTVLIR----TLGA 263

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +  +  +  ++P I                + I  +        +R+G  AE       
Sbjct: 264 AEPLEGTVRLVEPTIDTATRLG------RARIAIGQME------AVRSGMFAEAEILVSE 311

Query: 420 TTLA 423
               
Sbjct: 312 RDAL 315



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 74/250 (29%), Gaps = 7/250 (2%)

Query: 44  VSSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V +SG I   + V  ++       I+  + + G  + +G  L                 S
Sbjct: 50  VIASGLIGAVELVQ-VQPLIEGQPIETLEADVGDTVAEGQVLARLSVSTLELQKSQFTAS 108

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           + + R  I   ++ +       D  E+    R  QL        +         +S+  R
Sbjct: 109 LASARATIAQAEAQVLEAKASADEAERVNR-RTAQLRQQGAASQAAADTAQAASVSANAR 167

Query: 163 SLKMKLT---RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            +  + T       + L    L N    L            ++    +  A++       
Sbjct: 168 VMVARQTLEAARAQVALAEAQLANIELQLNRTSVVAPVAGEIVSRTAKVGAIASAQGEPM 227

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
             ++    LEL  ++ EQ  +     +      L  A  L E +  L +     A  + +
Sbjct: 228 FTLLRDGQLELFADVAEQDLLRLRPGQTVLIRTLGAAEPL-EGTVRLVEPTIDTATRLGR 286

Query: 280 LTILEKTREQ 289
             I     E 
Sbjct: 287 ARIAIGQMEA 296


>gi|169831308|ref|YP_001717290.1| RND family efflux transporter MFP subunit [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638152|gb|ACA59658.1| efflux transporter, RND family, MFP subunit [Candidatus
           Desulforudis audaxviator MP104C]
          Length = 395

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/262 (11%), Positives = 74/262 (28%), Gaps = 31/262 (11%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +++   L +     R++   + +L  ++ +   L +   +                    
Sbjct: 92  AALQDRLALAAAERRTLEAQQAELAEQNRVALELAALELEQAGTN--------------- 136

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
             ER  +    ++  +   +           + A  E      +         RT     
Sbjct: 137 -LERAEFLHAQQVIPDAELEAARRAREAAALNLARAEAGKLALDTVAARLDAARTAE--- 192

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
                 E+   Q  + +  AG I+  +            PL  +V   ++  + A++ P+
Sbjct: 193 ---RQAERQLRQARVTAASAGVILE-RMVEPGAVVAPGAPLF-VVGDPEILRVVAEIEPR 247

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
               V  G T  +R                 ++  ++      +      E   ++ ++ 
Sbjct: 248 DAGLVAAGQTVRIRHLA------GGAPVASGRVTRVVPSGTVTVSALGVKESKARV-EIE 300

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
             +   EL+ GF   V      
Sbjct: 301 VVEGARELKPGFQVNVEIIVDE 322



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 55/181 (30%), Gaps = 10/181 (5%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + ++V  +G++        + +   G +    V  G ++  G  L  F+     D + L 
Sbjct: 43  LTVTVRGTGDVEAAAPDR-VYAEAGGKLVAVPVAAGDRVAPGDLLAVFDTAALQDRLALA 101

Query: 100 KVSIKNLRC---------HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               + L            +  E +AL+      ++    F   ++ + D   +      
Sbjct: 102 AAERRTLEAQQAELAEQNRVALELAALELEQAGTNLERAEFLHAQQVIPDAELEAARRAR 161

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +     ++          T    +   R         LR    +      +++ + E  A
Sbjct: 162 EAAALNLARAEAGKLALDTVAARLDAARTAERQAERQLRQARVTAASAGVILERMVEPGA 221

Query: 211 V 211
           V
Sbjct: 222 V 222


>gi|300793784|ref|NP_001179352.1| 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-3 [Bos
            taurus]
 gi|297492128|ref|XP_002699375.1| PREDICTED: phospholipase C beta 3-like [Bos taurus]
 gi|296471496|gb|DAA13611.1| phospholipase C beta 3-like [Bos taurus]
          Length = 1234

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 82/222 (36%), Gaps = 12/222 (5%)

Query: 84   LLTFEDIETTDLIDL------KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
            L+     +  D  +L      K V++         +  A      +  VL    E  EE+
Sbjct: 967  LVKLRSRQERDFRELYKKHQRKAVALTRRLLDNLAQARAGSRCRQRPGVLSGEDERAEEE 1026

Query: 138  LLDFLGKYHSTCSK-VFNYGISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSS 194
             +    ++     + +     + V      +L  ++   L   +  L+   + L+ L   
Sbjct: 1027 EVSRYQEFQKKQVQCLLELREAQVDTEADRRLEHLQQAQLKLREVVLDAHMTQLKKLKEI 1086

Query: 195  HQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            ++++   ++ + ++   N++S+    ++ +   + T   R +I E  N +R + E   + 
Sbjct: 1087 NEREKKELQKILDRKRHNSISEAKTREKHKKEAELTEINRRHITESVNSIRRLEEAQKQR 1146

Query: 252  NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                    ++I + L + +     ++ +    ++ R  + I 
Sbjct: 1147 QERLVAGQQQILQQLAEEEPKLLAQLVQDCQEQRERLPQEIR 1188


>gi|116073799|ref|ZP_01471061.1| chromosome segregation protein SMC [Synechococcus sp. RS9916]
 gi|116069104|gb|EAU74856.1| chromosome segregation protein SMC [Synechococcus sp. RS9916]
          Length = 1202

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 67/200 (33%), Gaps = 1/200 (0%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    ++  + +  + R  ++  ++AL  L  ++  L       + +      +   +  
Sbjct: 774 QRNQRLEALRTAETSGRERLEALQTALAPLETEFQQLTGQERDAQAEGDVEAWQQLQSDL 833

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +  +  + S      + +   R   L+   L ++   L A  +  ++ +  +        
Sbjct: 834 EAADAALLSARSRKDLLVQEQRQRELSLERLGDQQQALDAEEARLKEAVETLTQTHGGWK 893

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             Q  L+++   +     EL+    EQ+           E          E+ R L + +
Sbjct: 894 EQQQQLSERRTSLEAQQKELQTAFGEQRRARDEAEAAVAEKRQRLQQARWELER-LREER 952

Query: 271 RTFADEMSKLTILEKTREQK 290
            T ++++    +  +   Q 
Sbjct: 953 NTLSEQIRSGAVRLQELSQT 972



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 81/228 (35%), Gaps = 11/228 (4%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             G  +     L   +       +   +     L       + +L+ L ++   L+ A E+
Sbjct: 820  EGD-VEAWQQL-QSDLEAADAALLSARSRKDLLVQEQRQRELSLERLGDQQQALD-AEEA 876

Query: 134  REEQLLDFLGKYH---STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            R ++ ++ L + H       +  +   +S+    K   T        R + E   +  R 
Sbjct: 877  RLKEAVETLTQTHGGWKEQQQQLSERRTSLEAQQKELQTAFGEQRRARDEAEAAVAEKRQ 936

Query: 191  LLSSHQKDLTMMKN----LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L   + +L  ++     L E+       L +  + +     ++ +++ E        + 
Sbjct: 937  RLQQARWELERLREERNTLSEQIRSGAVRLQELSQTLPDPRPDIPDDVREAGLEALQASL 996

Query: 247  LYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +  +E    +  ++  +L   ++  ++ + +L +L + RE+  + 
Sbjct: 997  QELQKRMEALEPVNMLALEELADLEQRLSELIERLEVLSQEREELLLR 1044


>gi|114640647|ref|XP_001162895.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 19 [Pan troglodytes]
          Length = 1362

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 24/229 (10%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++ +V     + +    L     E      L +   +  R  +  E+ A+D L  K 
Sbjct: 725 GRVEQLKVR----VKELEQQLQESAREAEMERALLQGEREAERALLQKEQKAVDQLQEKL 780

Query: 125 DVLEKAFE-SREEQLLDFLGKYHSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNR 178
             LE   +  R+++  +         ++          + +   S++ +L          
Sbjct: 781 VALETGIQKERDKERAELAAGRRHLEARQALYAELQTQLDNCPESVREQLQEQLRREAEA 840

Query: 179 LDLENKS-SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           L+ E K    L       +  +   + L  +  +             +S  EL  +I ++
Sbjct: 841 LETETKLFEDLEFQQLERESRVEEERELAGQGLL-------------RSKAELLRSIAKR 887

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           K  L  ++    +   +     + ++RD   + +    E  KLT+LE+ 
Sbjct: 888 KERLAILDSQAGQIRAQAVQESERLARDKNASLQLLQKEKEKLTVLERR 936



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 19/192 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +S+ +       + E    S EE L +      ST  +  +   + +   +         
Sbjct: 663 RSSEEPGVATQRLWESMERSDEENLKEECSSTESTQQEHEDAPSTKLQGEVLALEEERAQ 722

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-------------EKNAVSQND--LNQ 218
           +      L+ +   L   L    ++  M + L              E+ AV Q    L  
Sbjct: 723 VLGRVEQLKVRVKELEQQLQESAREAEMERALLQGEREAERALLQKEQKAVDQLQEKLVA 782

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFA 274
            E  + K   + R  +   +  L     LY E   +  N      +++   L +      
Sbjct: 783 LETGIQKERDKERAELAAGRRHLEARQALYAELQTQLDNCPESVREQLQEQLRREAEALE 842

Query: 275 DEMSKLTILEKT 286
            E      LE  
Sbjct: 843 TETKLFEDLEFQ 854


>gi|78777559|ref|YP_393874.1| secretion protein HlyD [Sulfurimonas denitrificans DSM 1251]
 gi|78498099|gb|ABB44639.1| Secretion protein HlyD [Sulfurimonas denitrificans DSM 1251]
          Length = 381

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 65/161 (40%), Gaps = 3/161 (1%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            +  + +++   G +  + N+  I +   G I +   + G  + +G  LL  + ++   L
Sbjct: 38  SIGELHVTIRGIGNVDAK-NIYNITAQSGGKINEIFFDEGDFVKKGDLLLIIDSVDMPLL 96

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++  K S+        + K + + L  +  ++E +  +R ++LL+      +   K    
Sbjct: 97  VEEAKASLLKAGFEASSSKESKEALEAQRTLIE-STHARYKKLLEQKYLSQAEYDKA-KS 154

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            ++++   +     ++ S     L L+     L+  L   +
Sbjct: 155 DLTNIDAQIASAKAKIASASSEELRLKKSIEALKEKLQRFK 195



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 77/228 (33%), Gaps = 35/228 (15%)

Query: 182 ENKSSLLRALLSSH-----QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           E K+SLL+A   +      ++ L   + L E        L +Q+ +             E
Sbjct: 99  EAKASLLKAGFEASSSKESKEALEAQRTLIESTHARYKKLLEQKYLSQ----------AE 148

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                  +  +  +     A      S +L             +  L++  ++  I SP+
Sbjct: 149 YDKAKSDLTNIDAQIASAKAKIASASSEELR--------LKKSIEALKEKLQRFKIYSPV 200

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G I+  +    ++Y   S  + KIV   K  +IR  +  +    +K G  AT+      
Sbjct: 201 DGYIIS-KDAELASYVLPSSTIFKIV-DPKTLWIRTNIDERVASELKVGQKATINLRSKP 258

Query: 357 DIREKKFKAIIEKIDPIISQQDN-----NLQTQEYY-----EVILKIT 394
           +         +      ++ +       ++   ++Y     EV +++ 
Sbjct: 259 NENIPATLQRVVATSNAVTLEREINVGFDVTPDKFYINEQAEVHVEVA 306


>gi|311107500|ref|YP_003980353.1| hemolysin D [Achromobacter xylosoxidans A8]
 gi|310762189|gb|ADP17638.1| HlyD family secretion family protein 3 [Achromobacter xylosoxidans
           A8]
          Length = 369

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/301 (10%), Positives = 83/301 (27%), Gaps = 33/301 (10%)

Query: 23  LSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            +++ I+  + W +L     P          ++       + S  SG + +  V N   +
Sbjct: 23  WAVLFIVLSLAWYLLADRYTPYTQQARVQAFVVP------VASEVSGRVTRVHVRNNQDV 76

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             G  L   +        +  ++++   R  +++ +  +       D  + +  + +   
Sbjct: 77  DAGAVLFDVDP-------EHYRIAVDRARADLESTRRQIGASTAGIDSAQASLRAAQANE 129

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           L                  +   R L++    +            +    R      ++D
Sbjct: 130 LKARQDSTRLERLYREDQGTVSLRRLEIARANLAQAISQVAAARAEVQRAREQEGGSEED 189

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +++       ++ DL   +             I + +          +      A +
Sbjct: 190 NAKLRSAAAALEKAELDLANTQ-----VRARSAGLITDLRTDAGQFAAAGNPVMTLIAIH 244

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS-NY-AQQSQ 316
              IS ++ +N          L  +E       IL  + G I   +  S           
Sbjct: 245 DVWISAEMTENN---------LGHVEPGTPVAIILDALPGQIFKGRVRSVGYGVNVGPGT 295

Query: 317 P 317
           P
Sbjct: 296 P 296


>gi|317151912|ref|YP_004119960.1| RND family efflux transporter MFP subunit [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316942163|gb|ADU61214.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 361

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 71/222 (31%), Gaps = 17/222 (7%)

Query: 204 NLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLK 260
           ++ +K   ++  D  +    + ++   LR+ + +   M +++         +    + L 
Sbjct: 80  DIVKKGDLIATIDSRELRSQMTEAEANLRQQVAKLNYMEQNLPRKRSLVRQQIEPQDSLD 139

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
              +D E  +   A   ++L  L+       I SPI G +    +            +  
Sbjct: 140 SAIQDTEMARHAAASARARLDTLKVQLSYTRIYSPIDGVVSQVAA-QEGETIVSGLSVSN 198

Query: 321 IVPHSKLTYIRA--KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           ++       +     +    +  V  G         Y D     F+  ++ I P    +D
Sbjct: 199 LITVLDPARLEMWIYIDETDVGRVTHGLPVRYTVDAYRDR---VFEGEVDTIYPEPEIRD 255

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           N +    YY  ++++T          LR     +     +  
Sbjct: 256 NIV----YYRTLVRVTPEQAG----ALRPEMTTQCKIIVETR 289



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/252 (11%), Positives = 82/252 (32%), Gaps = 20/252 (7%)

Query: 40  IEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IE 91
           +   + ++G +  +      I +  +G+++   V+ G  + +G  + T +         E
Sbjct: 43  VSKILEATGIVKAQVGAQVKIGAQATGVLESVPVKVGDIVKKGDLIATIDSRELRSQMTE 102

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
               +  +   +  +  ++  ++S +       D L+ A +  E              + 
Sbjct: 103 AEANLRQQVAKLNYMEQNLPRKRSLVRQQIEPQDSLDSAIQDTEMARHAAASARARLDTL 162

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                 + +Y  +   ++++ +     +      S L  +L   + ++ +  +  +   V
Sbjct: 163 KVQLSYTRIYSPIDGVVSQVAAQEGETIVSGLSVSNLITVLDPARLEMWIYIDETDVGRV 222

Query: 212 S------------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           +            ++ + + E        E+R+NI   + ++R   E       E     
Sbjct: 223 THGLPVRYTVDAYRDRVFEGEVDTIYPEPEIRDNIVYYRTLVRVTPEQAGALRPEMTTQC 282

Query: 260 KEISRDLEQNQR 271
           K I         
Sbjct: 283 KIIVETRRDVLA 294


>gi|325928816|ref|ZP_08189983.1| RND family efflux transporter, MFP subunit [Xanthomonas perforans
           91-118]
 gi|325540789|gb|EGD12364.1| RND family efflux transporter, MFP subunit [Xanthomonas perforans
           91-118]
          Length = 414

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/135 (10%), Positives = 44/135 (32%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +     G +     + G ++ +G  L   +        D    + 
Sbjct: 64  ASALGTVT-ALNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAK 122

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +      N+      V     +++  Q+  +     +  +++ +  +   
Sbjct: 123 RQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVAANDAQMRSAQVQLQ 182

Query: 161 YRSLKMKLTRMRSIY 175
           +  +   +  +  I 
Sbjct: 183 FTRVTAPIDGIAGIR 197



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 53/146 (36%), Gaps = 5/146 (3%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEI 262
            +K   ++Q D    +    ++    R+N         +     D A  ++ +   L   
Sbjct: 97  VKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQ 156

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + Q +   A   +++   +   +   + +PI G I   +     N    S  ++ + 
Sbjct: 157 RNQVAQYEAAVAANDAQMRSAQVQLQFTRVTAPIDG-IAGIRGVDVGNIVTSSSTIVTLT 215

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTA 348
              +  Y+   +  +++Q V+ G TA
Sbjct: 216 -QIRPIYVSFNLPERELQAVRTGQTA 240


>gi|319653917|ref|ZP_08008011.1| hypothetical protein HMPREF1013_04630 [Bacillus sp. 2_A_57_CT2]
 gi|317394453|gb|EFV75197.1| hypothetical protein HMPREF1013_04630 [Bacillus sp. 2_A_57_CT2]
          Length = 372

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 13/151 (8%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I+  +   G     +      SP  G IK+F VE G  + +G  L  F+D      ++ 
Sbjct: 43  EIKEQIMIPGTAKLVNEQKIYASPEKGEIKEFLVEEGDSVKKGEVLAKFDDQALELELEK 102

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            K+  ++    I+  +   D L +K   L K    +E               K       
Sbjct: 103 VKLQAESGYIKINQLEKEEDQLRDKEKELRKQAGEKEAD-------------KQIQPERD 149

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            +    ++    +  + L + D+E +   L 
Sbjct: 150 QLKLEKRLANLELSQVLLQKKDIEKRLGELE 180



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 90/236 (38%), Gaps = 30/236 (12%)

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            + + +L  +K   E   +  N L ++E  +     ELR+   E K   + I    D+  
Sbjct: 94  QALELELEKVKLQAESGYIKINQLEKEEDQLRDKEKELRKQAGE-KEADKQIQPERDQLK 152

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           LE     +  + +L Q      D   +L  LE       + S I G ++     ++S+ A
Sbjct: 153 LE----KRLANLELSQVLLQKKDIEKRLGELE-------VKSTIDGVVLQVNKAATSDPA 201

Query: 313 QQSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
              +P++ +     L  + A   ++      VK+G   T+R      I EK++K  + ++
Sbjct: 202 TAGKPVIYV---GDLKAVGASGLLSEFDSLKVKEGQKVTLRSDA---IPEKEWKGEVSEV 255

Query: 371 DPIISQQ---DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
             +  +    +   ++   Y V + + +       + LR+GF   +          
Sbjct: 256 ADMPEENQGMNPAEKSASQYRVEVTVKE-------LSLRSGFQLIMEIETDKKKAL 304


>gi|293396851|ref|ZP_06641125.1| macrolide efflux protein MacA [Serratia odorifera DSM 4582]
 gi|291420322|gb|EFE93577.1| macrolide efflux protein MacA [Serratia odorifera DSM 4582]
          Length = 370

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 77/218 (35%), Gaps = 24/218 (11%)

Query: 212 SQNDLNQQERIVYKSTLELRENIH---------EQKNMLRHINELYDEANLEFANYLKEI 262
           +QN + + E  + +   +L +            ++   L  +  +  +   +FA  L   
Sbjct: 97  AQNSIRESEATLRELHAQLNQAQAEQQLAAVTLQRNRELARLQAVSRQDLDKFATELAVK 156

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMK 320
              +E  +   A   + L   +       I +P+ G +V   +          Q   ++ 
Sbjct: 157 KAQVETTRAQIAKNQASLDTAKINLAYTRIEAPMDGDVVQITTLQGQTVIAAQQAPNILT 216

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +        ++A+V+   + H++ G  A   F    D   K+F  +++ I P   + +N 
Sbjct: 217 LA-DLSTMLVKAQVSEADVIHLRPGQKAW--FTVLGD-PSKRFDGVLKDIQPTPEKVNNA 272

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +    +Y    ++ +       + L+    A+V     
Sbjct: 273 I----FYYARFEVPNP---QGLLRLQ--MTAQVHIQLG 301



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 76/195 (38%), Gaps = 16/195 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ +V ++G++     V ++ +  SG ++   VE G ++ +G  L   +  +  + I   
Sbjct: 46  LQQNVLATGQLDAVRKV-DVGAQVSGQLESLTVEIGDKVKKGQLLGVIDPQQAQNSIRES 104

Query: 100 KVSIKNLRCHIDTEKSALD----------FLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           + +++ L   ++  ++              L     V  +  +    +L     +  +T 
Sbjct: 105 EATLRELHAQLNQAQAEQQLAAVTLQRNRELARLQAVSRQDLDKFATELAVKKAQVETTR 164

Query: 150 SKVFNYGISSVYRSLKMKLTRMRS----IYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           +++     S     + +  TR+ +      +    L+ ++ ++ A  + +   L  +  +
Sbjct: 165 AQIAKNQASLDTAKINLAYTRIEAPMDGDVVQITTLQGQT-VIAAQQAPNILTLADLSTM 223

Query: 206 FEKNAVSQNDLNQQE 220
             K  VS+ D+    
Sbjct: 224 LVKAQVSEADVIHLR 238


>gi|254704618|ref|ZP_05166446.1| HlyD family secretion protein [Brucella suis bv. 3 str. 686]
 gi|261755308|ref|ZP_05999017.1| secretion protein HlyD family protein [Brucella suis bv. 3 str.
           686]
 gi|261745061|gb|EEY32987.1| secretion protein HlyD family protein [Brucella suis bv. 3 str.
           686]
          Length = 355

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 152


>gi|254504161|ref|ZP_05116312.1| putative auxiliary transport protein, MFP family [Labrenzia
           alexandrii DFL-11]
 gi|222440232|gb|EEE46911.1| putative auxiliary transport protein, MFP family [Labrenzia
           alexandrii DFL-11]
          Length = 384

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/246 (12%), Positives = 74/246 (30%), Gaps = 29/246 (11%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L++          + F   +S    +L      +  +  +    E   S   A     + 
Sbjct: 83  LVEEGTVLFKIDPEPFEAAVSRSRAALAEAKQAVPQLEASFGAAEASVSEAVANRDRAKD 142

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +   ++    +NA +            +ST     ++ + +            A      
Sbjct: 143 EFDRLRT-ANENATALGR---------QSTPFSESDVEQLRLTYLASEASLTRAEATAEQ 192

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                + +++    T A   + L   E    +  + +P  G ++           +  Q 
Sbjct: 193 ARLAFTSEIDGQNTTVARLEADLRRAEFDLRETVVRAPADGYVLALT-------LRPGQR 245

Query: 318 L--------MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           +        M   P +    + A +   +++ ++    A V    +A +  K F A +E 
Sbjct: 246 VSNLPLRSWMAFAPVATGRVV-ASIPQTRVRFIEPNQPAEV---TFAYLPGKVFAAQVES 301

Query: 370 IDPIIS 375
           +  I +
Sbjct: 302 LVRITA 307


>gi|218550871|ref|YP_002384662.1| hypothetical protein EFER_3587 [Escherichia fergusonii ATCC 35469]
 gi|218358412|emb|CAQ91059.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
 gi|325499143|gb|EGC97002.1| hypothetical protein ECD227_3240 [Escherichia fergusonii ECD227]
          Length = 378

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/294 (11%), Positives = 94/294 (31%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    +GI+ +   +N   I +G  L   + +     +   +  +     +I T ++ L 
Sbjct: 66  ITPQVTGIVSEVTDKNNQLIHKGDVLFKLDPVRYQARVTRLQADLMTATHNIKTLRAQLA 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +    +   +    +L    +  +      I    ++   +   ++     +
Sbjct: 126 EAVANTTQVSAERDRLYKNYQRYLKGSQAVVNPFSERDIDDARQNFLAQDALVKGSVAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
             ++++   L ++++  Q  +  ++  L E        + +     Y + + +R   +  
Sbjct: 186 AQIQSQ---LDSMINGEQSQIVSLRAQLAEAEYNLAQTVVRAPSNGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    ++        + L       +   IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLESGDEAEVVFNALPGQVFRGKLTQIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +        + P  ++  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLALIDLEPNAEVDALPDGIYAQV 347


>gi|198274898|ref|ZP_03207430.1| hypothetical protein BACPLE_01057 [Bacteroides plebeius DSM 17135]
 gi|198272345|gb|EDY96614.1| hypothetical protein BACPLE_01057 [Bacteroides plebeius DSM 17135]
          Length = 344

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 54/184 (29%), Gaps = 17/184 (9%)

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L  + H  K  L    + YD   + +              Q       +   +  K  + 
Sbjct: 99  LTSSYHAAKASLDQAQDAYDRLKVLYEE-KSLPEIKWVDMQSKLQQAKAMEEVARKNLKD 157

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P  G I   +            P++ +V   +   I+  V    I  ++ G  A 
Sbjct: 158 CQLKAPFEGVIAGKKV-EIGQNVAPGVPVVDLV-SMQQVKIKVSVPEGDIADIQVGDEAL 215

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           V  P          +  + +   + +    +      YEV +     A  + N  L  G 
Sbjct: 216 VCIPA---AENLCLEGRVMEKGIVANPLSRS------YEVKI-----AVENRNHVLLPGM 261

Query: 410 PAEV 413
             +V
Sbjct: 262 VTDV 265



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 35/102 (34%), Gaps = 4/102 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K  V+ G  +++G P+ + +    T      K S+   +   D     L  L  + 
Sbjct: 72  GTVSKVYVKTGDHVVKGQPIASIDATTLTSSYHAAKASLDQAQDAYDR----LKVLYEEK 127

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            + E  +   + +L             + +  + + +  +  
Sbjct: 128 SLPEIKWVDMQSKLQQAKAMEEVARKNLKDCQLKAPFEGVIA 169


>gi|158137914|gb|ABW17378.1| MacA [Pseudomonas putida]
          Length = 385

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 60/224 (26%), Gaps = 23/224 (10%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLR------HINELYDEANLEFANYLKEIS 263
            V +N L Q E    K   E R  + + K   R       +      +  +F N   E  
Sbjct: 94  LVLRNTLRQAEVDEDKLQAERRSTLAQLKQARRVYERYRELQADESVSRQDFENAESEYE 153

Query: 264 RDLEQNQR---TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PL 318
                 +           ++   +       I +PI G +V             +Q  P+
Sbjct: 154 VQQAAVRSLDAQIQSARVEIDTAKVNLGYTRINAPINGHVVGI-VTQEGQTVIANQLAPV 212

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI------IEKIDP 372
           +  +       ++A+V+   + H+  G                K +          +   
Sbjct: 213 LLKLADLDTMTVKAQVSEADVIHISPGQQVYFTILGEDKRYYAKLRGTEPAPQNYAQSAD 272

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                        +Y  + ++ +         LR    A+V   
Sbjct: 273 NSDGSAAKPNGAVFYNALFEVPNPE-----HRLRISMTAQVHIV 311



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 66/173 (38%), Gaps = 22/173 (12%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLP---------------IEISVSSSGEILNEDNVVEI 59
              K    +++  + G+  ++I  P               IE +V ++G +     V ++
Sbjct: 5   RFRKFGLGIAVALVAGITLYAIQAPAKPPQYITATVERGDIENAVLATGTLEGIKQV-DV 63

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF 119
            +  SG ++  +V+ G ++ +G  L   + +   + +   +V    L+      +S L  
Sbjct: 64  GAQVSGQLRSLKVKLGDKVSEGQWLAEIDPLVLRNTLRQAEVDEDKLQAE---RRSTLAQ 120

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           L     V E+    RE Q  + + +     ++       +  RSL  ++   R
Sbjct: 121 LKQARRVYER---YRELQADESVSRQDFENAESEYEVQQAAVRSLDAQIQSAR 170


>gi|15077772|gb|AAK83333.1|AF372703_4 putative periplasmic protein [Pseudomonas syringae pv. syringae]
          Length = 389

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 70/203 (34%), Gaps = 22/203 (10%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  IE +VS+ G +L   N V++ +  SG ++  +V+ G Q+ +   L   + +   +
Sbjct: 48  AEVTDIEYAVSAQG-VLQGRNQVDVGAQVSGQLQSLKVKPGDQVKKNQLLAEIDPLPARN 106

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNN-----------------KYDVLEKAFESREEQ 137
            +    V I+ L    D     L    +                   D      E++   
Sbjct: 107 ALRQAVVKIEQLTAERDATLHRLKLAESNDRRYQELGATTAVSKADQDKARFELETQRAN 166

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    + H+   +     I   Y  +   +       + +       +++    +    
Sbjct: 167 LVSLTAQLHTARVQEEAARIKLDYTRIFAPMDGQVLAIVTQEG----QTVIADQTAPVIL 222

Query: 198 DLTMMKNLFEKNAVSQNDLNQQE 220
            +  +  +  K  VS+ D+ + +
Sbjct: 223 KMAQLDTMTVKAQVSEADVLKIK 245



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 55/198 (27%), Gaps = 14/198 (7%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK-----------NAVSQNDLNQQERIVY 224
            N++D+  + S     L     D      L  +            AV + +    ER   
Sbjct: 66  RNQVDVGAQVSGQLQSLKVKPGDQVKKNQLLAEIDPLPARNALRQAVVKIEQLTAERDAT 125

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              L+L E+   +   L     +      +    L+    +L            +     
Sbjct: 126 LHRLKLAESNDRRYQELGATTAVSKADQDKARFELETQRANLVSLTAQLHTARVQEEAAR 185

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQHV 342
              +   I +P+ G ++              Q    I+         ++A+V+   +  +
Sbjct: 186 IKLDYTRIFAPMDGQVLAI-VTQEGQTVIADQTAPVILKMAQLDTMTVKAQVSEADVLKI 244

Query: 343 KKGYTATVRFPHYADIRE 360
           K G       P   D R 
Sbjct: 245 KPGLAIYFTIPGDPDTRY 262


>gi|66045839|ref|YP_235680.1| secretion protein HlyD [Pseudomonas syringae pv. syringae B728a]
 gi|63256546|gb|AAY37642.1| Secretion protein HlyD [Pseudomonas syringae pv. syringae B728a]
          Length = 389

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 70/203 (34%), Gaps = 22/203 (10%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  IE +VS+ G +L   N V++ +  SG ++  +V+ G Q+ +   L   + +   +
Sbjct: 48  AEVTDIEYAVSAQG-VLQGRNQVDVGAQVSGQLQSLKVKPGDQVKKNQLLAEIDPLPARN 106

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNN-----------------KYDVLEKAFESREEQ 137
            +    V I+ L    D     L    +                   D      E++   
Sbjct: 107 ALRQAVVKIEQLTAERDATLHRLKLAESNDRRYQELGATTAVSKADQDKARFELETQRAN 166

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    + H+   +     I   Y  +   +       + +       +++    +    
Sbjct: 167 LVSLTAQLHTARVQEEAARIKLDYTRIFAPMDGQVLAIVTQEG----QTVIADQTAPVIL 222

Query: 198 DLTMMKNLFEKNAVSQNDLNQQE 220
            +  +  +  K  VS+ D+ + +
Sbjct: 223 KMAQLDTMTVKAQVSEADVLKIK 245



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 78/267 (29%), Gaps = 14/267 (5%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++++K+ ++ +   +    +   F        E AF S   ++ D      +        
Sbjct: 8   LNVRKILLRIVLIDLTVSLAGYAFYKGASGEEETAFLSAAAEVTDIEYAVSAQGVLQGRN 67

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +      +  +++        +   + K + L A +        +      + AV + +
Sbjct: 68  QVD-----VGAQVSGQLQSLKVKPGDQVKKNQLLAEIDPLPARNAL------RQAVVKIE 116

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
               ER      L+L E+   +   L     +      +    L+    +L         
Sbjct: 117 QLTAERDATLHRLKLAESNDRRYQELGATTAVSKADQDKARFELETQRANLVSLTAQLHT 176

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAK 333
              +        +   I +P+ G ++              Q    I+         ++A+
Sbjct: 177 ARVQEEAARIKLDYTRIFAPMDGQVLAI-VTQEGQTVIADQTAPVILKMAQLDTMTVKAQ 235

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIRE 360
           V+   +  +K G       P   D R 
Sbjct: 236 VSEADVLKIKPGLAIYFTIPGDPDTRY 262


>gi|54298294|ref|YP_124663.1| chemiosmotic efflux system C protein B [Legionella pneumophila str.
           Paris]
 gi|53752079|emb|CAH13505.1| Chemiosmotic efflux system C protein B [Legionella pneumophila str.
           Paris]
          Length = 322

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 39/118 (33%), Gaps = 16/118 (13%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +PIAG I   ++ +     + +  L  I  +     + A+V  + +  +K G    V 
Sbjct: 128 VTAPIAGII-DARNINLGQAVEPNTVLFHIS-NRDKLLVIAQVYEEDLDKIKVGQEVNVH 185

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              Y           +  I+P +      +       V + + +         L+ G 
Sbjct: 186 ALSYPKRTFP---GQVTLIEPNLDSLTRTVN------VRITLDNEEKL-----LKPGM 229


>gi|110804881|ref|YP_688401.1| macrolide transporter subunit MacA [Shigella flexneri 5 str. 8401]
 gi|189406316|ref|ZP_03008148.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC508]
 gi|12513908|gb|AAG55260.1|AE005269_4 putative membrane protein [Escherichia coli O157:H7 str. EDL933]
 gi|13360423|dbj|BAB34387.1| putative membrane protein [Escherichia coli O157:H7 str. Sakai]
 gi|110614429|gb|ABF03096.1| putative membrane protein [Shigella flexneri 5 str. 8401]
 gi|189375365|gb|EDU93781.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC508]
 gi|209775148|gb|ACI85886.1| putative membrane protein [Escherichia coli]
 gi|209775150|gb|ACI85887.1| putative membrane protein [Escherichia coli]
 gi|209775152|gb|ACI85888.1| putative membrane protein [Escherichia coli]
 gi|209775154|gb|ACI85889.1| putative membrane protein [Escherichia coli]
 gi|209775156|gb|ACI85890.1| putative membrane protein [Escherichia coli]
          Length = 380

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 120 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRN 179

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 180 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 238

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 239 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 291

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 292 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 330



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 55  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 113

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++   L D      +T   V    I +
Sbjct: 114 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDL--DTAATEMAVKQAQIGT 171

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 172 IDAQIKRNQASLDTAKTN 189


>gi|118578589|ref|YP_899839.1| RND family efflux transporter MFP subunit [Pelobacter propionicus
           DSM 2379]
 gi|118501299|gb|ABK97781.1| efflux transporter, RND family, MFP subunit [Pelobacter propionicus
           DSM 2379]
          Length = 383

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 51/176 (28%), Gaps = 14/176 (7%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHIN---------ELYDEANLEFANYLKEISRD 265
            +   E    ++T  LRE        L+             + +E        L+     
Sbjct: 103 RVRSLESTFNRATAALREAEARHAYALKQAKRYEGLLASGAVSEEIVATKLQELQVADAA 162

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L   +   A   S    L   R    ++SP  G IV  +     +     Q +++IV   
Sbjct: 163 LSAAREDTARVRSDREALVAQRNNVRLVSP-KGGIVARRDAEPGSTVVAGQTVVEIV-DP 220

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
              ++ A+        +  G  A +             K  + +I+P        +
Sbjct: 221 DTLWVNARFDQTSASGLSGGLPARIVL---RSREGVVLKGRVLRIEPKADSVTEEM 273



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/118 (11%), Positives = 38/118 (32%), Gaps = 2/118 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK+  V  G  +  G  L   + ++  D +   + +       +   ++   +   + 
Sbjct: 73  GRIKQINVNVGDHVTAGQLLGEMDPVDLDDRVRSLESTFNRATAALREAEARHAYALKQA 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              E    S    + + +        +V +  +S+         +   ++   R ++ 
Sbjct: 133 KRYEGLLAS--GAVSEEIVATKLQELQVADAALSAAREDTARVRSDREALVAQRNNVR 188


>gi|295135930|ref|YP_003586606.1| multidrug resistance protein (substrate binding lipoprotein)
           [Zunongwangia profunda SM-A87]
 gi|294983945|gb|ADF54410.1| putative multidrug resistance protein (substrate binding
           lipoprotein) [Zunongwangia profunda SM-A87]
          Length = 340

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 66/220 (30%), Gaps = 35/220 (15%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VS  D  Q+  ++ K      +  +E +     + +       E  N        + + +
Sbjct: 67  VSMGDFVQKGSLIAKIDGTAYQKQYEARRAQAEMAKDNYNRVAEVYNKGSIAEVKMVEAR 126

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK---------I 321
             +    +      +  +   I +P  G I   +   + + A   QP++          I
Sbjct: 127 SNYKQAEAAAQASYQNVKFTRITAPFTGYI-GEKMMETGDLASPGQPIVDFFDIDKLKAI 185

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           +P          +   Q+   + G  A V+      +    ++  I +I           
Sbjct: 186 IP----------IPDDQVNQYQTGDKAIVKIEVLDTV----YEGEITEISVQSDSNT--- 228

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                Y   + IT     + N +++ G    V    K  +
Sbjct: 229 ---PSYTAKITIT-----NQNKKIKPGMACTVTLPEKEKS 260



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 46  SSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           ++G I  + +V    +   SGII++F V  G  + +G+ +   +        + ++   +
Sbjct: 42  ATGRIAADKSVKLSFQ--VSGIIEQFPVSMGDFVQKGSLIAKIDGTAYQKQYEARRAQAE 99

Query: 105 NLR 107
             +
Sbjct: 100 MAK 102


>gi|262165904|ref|ZP_06033641.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           mimicus VM223]
 gi|262025620|gb|EEY44288.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           mimicus VM223]
          Length = 416

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 56/167 (33%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L T +  +    ++  ++ +KN        K+  +     
Sbjct: 129 SGRLTDIAVKEGDQVKKGQRLATLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAI 188

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ D   K   T       GI S          +   + +   
Sbjct: 189 SKAELDKVTNRYDLAKNRVEDAKRKLEYTQITAPFDGIISEKVVENFAQVQANQVIMTLQ 248

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +   ++          +   + + E +A+     + Q R     
Sbjct: 249 DLSDLEVVIEIPHRVMLSGVRNTRAIAELSAIPDQQFDLQLRTYSTQ 295



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 62/206 (30%), Gaps = 27/206 (13%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + +R+    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 142 QVKKGQRLATLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYD 201

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAK 333
              +++   ++  E   I +P  G I   +   +    Q +Q +M +   S     I   
Sbjct: 202 LAKNRVEDAKRKLEYTQITAPFDGIISE-KVVENFAQVQANQVIMTLQDLSDLEVVIEI- 259

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-----YE 388
                           V          +    +    D     Q     TQ       Y 
Sbjct: 260 -------------PHRVMLS--GVRNTRAIAELSAIPDQQFDLQLRTYSTQPSPDSQTYS 304

Query: 389 VILKITDLAFSDNNIELRNGFPAEVL 414
           V+L   DL        +  G  A+VL
Sbjct: 305 VVLGFEDL----KGFRVMPGMSAKVL 326


>gi|218530626|ref|YP_002421442.1| secretion protein HlyD [Methylobacterium chloromethanicum CM4]
 gi|218522929|gb|ACK83514.1| secretion protein HlyD family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 289

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 89/245 (36%), Gaps = 20/245 (8%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +   +     L  ++S+ +NR     K+  + A L S  ++  +  +  +  + +  +  
Sbjct: 40  AQKLKIGSATLGILKSVPVNR-GAAVKAGDIIARLDSSVEEANVALSRAQAESTAGIEAQ 98

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q    +YK  LE +  + +       ++++  +  +   +   EI   L+          
Sbjct: 99  QTRVELYKRRLERQNQLSKGIVTQEKLDQVEADYEIGRRDLQTEI---LKHKLNGI---- 151

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
            +L   E   E + I SPI G +   +  S+  + +Q   +  +V      Y+ A +   
Sbjct: 152 -ELQRAEAQLELRMIRSPIRGIVTE-RLMSAGEFVRQDSAIFTLV-QLDPLYVEAYLPVA 208

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           + + +  G  ATV            ++A +  +D +             + V L++ +  
Sbjct: 209 RWKEIALGMPATVVL---DQPIGGAYEAKVSVVDQVFDAASGT------FGVRLELPNPD 259

Query: 398 FSDNN 402
           F    
Sbjct: 260 FKLPG 264



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 56/152 (36%), Gaps = 9/152 (5%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           ++     ++I S   GI+K   V  G+ +  G  +   +       + L +   ++    
Sbjct: 36  VVEPAQKLKIGSATLGILKSVPVNRGAAVKAGDIIARLDSSVEEANVALSRAQAEST--- 92

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                + ++    + ++ ++  E R+ QL   +           +Y I       ++   
Sbjct: 93  -----AGIEAQQTRVELYKRRLE-RQNQLSKGIVTQEKLDQVEADYEIGRRDLQTEILKH 146

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           ++  I L R + + +  ++R+ +     +  M
Sbjct: 147 KLNGIELQRAEAQLELRMIRSPIRGIVTERLM 178


>gi|213620830|ref|ZP_03373613.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 301

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  L      +          
Sbjct: 42  LNAERQQAAAELKLARVTLARQQQLAKTQAVSQQDLDTAATELAVKQARIGTIDAQIKRN 101

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 102 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 160

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 161 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKINDAIFYYARFEVP 213

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 214 NPKRI-----LRLDMTAQVYIQ 230



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 40/113 (35%), Gaps = 2/113 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V  G  + +   L   +  +  + I   + ++  L    + +++A +    + 
Sbjct: 1   GQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNA--ERQQAAAELKLARV 58

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            +  +   ++ + +        +T   V    I ++   +K     + +   N
Sbjct: 59  TLARQQQLAKTQAVSQQDLDTAATELAVKQARIGTIDAQIKRNRASLDTAKTN 111


>gi|153835496|ref|ZP_01988163.1| membrane-fusion protein [Vibrio harveyi HY01]
 gi|148867935|gb|EDL67143.1| membrane-fusion protein [Vibrio harveyi HY01]
          Length = 368

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  +    + +  L+ T +++ I +P AG +V  ++     Y Q       IV     
Sbjct: 142 EAEANYFSLKADIESLKATIDRREIKAPFAG-VVGIRNVYLGQYLQAGT---DIVRLEDT 197

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           T +R +  V    I  +K      +    Y D   K FK  I  I+P ++ Q   +Q Q 
Sbjct: 198 TVMRLRFTVPQTDISRIKLDQEVDIFVDAYPD---KPFKGSISAIEPAVNVQSGLIQVQ- 253

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +++ +LR+G  A    
Sbjct: 254 ----------ADIPNSDGKLRSGMFARANI 273



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 47/135 (34%), Gaps = 5/135 (3%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G I     V  I +  SG+I K   ++G+Q+ +G PL+  +       +   +  
Sbjct: 57  VIEAIGFIEPNQGV-TIANETSGVIDKISFDSGTQVEEGQPLVHLDSDVEKANLKSSQAK 115

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   +      +     L  K  + ++A++  E           S  + +    I + + 
Sbjct: 116 LPAAQAKYKRYQG----LFKKGSISKEAYDEAEANYFSLKADIESLKATIDRREIKAPFA 171

Query: 163 SLKMKLTRMRSIYLN 177
            +          YL 
Sbjct: 172 GVVGIRNVYLGQYLQ 186


>gi|154336507|ref|XP_001564489.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 1419

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 79/215 (36%), Gaps = 7/215 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              E  +    ++ ++   + L   ++ +++  + L  + +      E    ++++   + 
Sbjct: 1040 RAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEKSAEAEKLAAEVVEQRAEA 1099

Query: 146  HSTCSKVFNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +++      +  +   L+ K      +    ++   ++  L A L   + +   + 
Sbjct: 1100 EKLAAELEEQRAEAEKLAAELEEKRAEAEKLAAELVEQRAEAEKLAAELEEQRAEAEKLA 1159

Query: 204  -NLFEKNAVSQ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              L E+ A ++    +L +Q     K   EL E   E + +   + E   EA  + A  L
Sbjct: 1160 AELVEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAE-KLAAEL 1218

Query: 260  KEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             E   + E+      ++ ++   L    E++   +
Sbjct: 1219 VEQRAEAEKLAVELEEQRAEAEKLAAELEEQRAEA 1253



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 73/210 (34%), Gaps = 7/210 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              E  +    ++ ++   + L   ++ +++  + L  +        E    +L +   + 
Sbjct: 1096 RAEAEKLAAELEEQRAEAEKLAAELEEKRAEAEKLAAELVEQRAEAEKLAAELEEQRAEA 1155

Query: 146  HSTCSKVFNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +++      +  +   L+ +      +     +   ++  L A L   + +   + 
Sbjct: 1156 EKLAAELVEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLA 1215

Query: 204  -NLFEKNAVSQ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              L E+ A ++    +L +Q     K   EL E   E + +   + E   EA  + A  L
Sbjct: 1216 AELVEQRAEAEKLAVELEEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAE-KLAAEL 1274

Query: 260  KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E   + E+     A   +K     + R+ 
Sbjct: 1275 VEQRAEAEKLAAEVAAFRAKRNAALEARDA 1304



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/203 (10%), Positives = 68/203 (33%), Gaps = 4/203 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              E  +    ++ K+   + L   ++ +++  + L  + +      E    +L +   + 
Sbjct: 1012 RAEAEKLAAELEEKRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEA 1071

Query: 146  HSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +++         +   +  +      +     +   ++  L A L   + +   + 
Sbjct: 1072 EKLAAELEEKSAEAEKLAAEVVEQRAEAEKLAAELEEQRAEAEKLAAELEEKRAEAEKLA 1131

Query: 204  -NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
              L E+ A ++    + E    ++  +L   + EQ+     +    +E   E      E+
Sbjct: 1132 AELVEQRAEAEKLAAELEEQRAEAE-KLAAELVEQRAEAEKLAAELEEQRAEAEKLAAEL 1190

Query: 263  SRDLEQNQRTFADEMSKLTILEK 285
                 + ++  A+   +    EK
Sbjct: 1191 EEQRAEAEKLAAELEEQRAEAEK 1213



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 77/215 (35%), Gaps = 7/215 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E  +    ++ K+   + L   +  +++  + L  + +      E    +L++   + 
Sbjct: 312 RAEAEKLAAELEEKRAEAEKLAAELVEQRAEAEKLAAELEEQRAEAEKLAAELVEQRAEA 371

Query: 146 HSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               +++         +   L+ +      +     +   ++  L A +   + +   + 
Sbjct: 372 EKLAAELEEKSAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAEVVEQRAEAEKLA 431

Query: 204 -NLFEKNAVSQ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             L E+ A ++    +L +Q     K   EL E   E + +   + E   EA  + A  L
Sbjct: 432 AELVEQRAEAEKLAVELEEQRAEAEKLAAELVEQRAEAEKLAAELEEQRAEAE-KLAVEL 490

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           +E   + E+      ++ ++   L    E++   +
Sbjct: 491 EEQRAEAEKLAAELEEKRAEAEKLAAELEEQRAEA 525



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 71/199 (35%), Gaps = 7/199 (3%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            ++ ++   + L   ++ +++  + L  + +      E    +L +   +     +++  
Sbjct: 489 ELEEQRAEAEKLAAELEEKRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEE 548

Query: 155 --YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAV 211
                  +   L+ +      +     +   ++  L A +   + +   +   L E+ A 
Sbjct: 549 KSAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAEVVEQRAEAEKLAAELVEQRAE 608

Query: 212 SQ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           ++    +L +Q     K   EL E   E + +   + E   EA  + A  L+E   + E+
Sbjct: 609 AEKLAVELEEQRAEAEKLAAELVEQRAEAEKLAAELVEQRAEAE-KLAAELEEQRAEAEK 667

Query: 269 NQRTFADEMSKLTILEKTR 287
                 ++ ++   L    
Sbjct: 668 LAAELEEQRAEAEKLAAEL 686



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 61/178 (34%), Gaps = 6/178 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E  +    ++ ++   + L   ++ + +  + L  + +      E    +L +   + 
Sbjct: 522 RAEAEKLAAELEEQRAEAEKLAAELEEKSAEAEKLAAELEEQRAEAEKLAAELEEQRAEA 581

Query: 146 HSTCSKVFNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               ++V      +  +   L  +      + +   +   ++  L A L   + +   + 
Sbjct: 582 EKLAAEVVEQRAEAEKLAAELVEQRAEAEKLAVELEEQRAEAEKLAAELVEQRAEAEKLA 641

Query: 204 -NLFEKNAVSQ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             L E+ A ++    +L +Q     K   EL E   E + +   + E   EA    A 
Sbjct: 642 AELVEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELVEQRAEAEKLAAE 699



 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 52/154 (33%), Gaps = 2/154 (1%)

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           + E +      +  +   +        +   L+ K      +    ++   ++  L A L
Sbjct: 291 AAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEKRAEAEKLAAELVEQRAEAEKLAAEL 350

Query: 193 SSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
              + +   +   L E+ A ++    + E    ++  +L   + EQ+     +    +E 
Sbjct: 351 EEQRAEAEKLAAELVEQRAEAEKLAAELEEKSAEAE-KLAAELEEQRAEAEKLAAELEEQ 409

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             E      E+     + ++  A+ + +    EK
Sbjct: 410 RAEAEKLAAEVVEQRAEAEKLAAELVEQRAEAEK 443



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 21/198 (10%), Positives = 61/198 (30%), Gaps = 8/198 (4%)

Query: 92  TTDLIDLKKVSIKNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             ++   +      L     D     L+      +   +A + R+       G  ++   
Sbjct: 222 AAEVAAFRAKRNAALEARDADGTLPVLEKAVAADEAAAQALDPRQIA----DGPLYAVTL 277

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +    ++V +       +         +LE + +    L +  ++     + L  +  
Sbjct: 278 EEYRDRDAAVGQLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEKRAEAEKLAAELV 337

Query: 211 VSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             + +  +    + +   E   L   + EQ+     +    +E + E      E+     
Sbjct: 338 EQRAEAEKLAAELEEQRAEAEKLAAELVEQRAEAEKLAAELEEKSAEAEKLAAELEEQRA 397

Query: 268 QNQRTFADEMSKLTILEK 285
           + ++  A+   +    EK
Sbjct: 398 EAEKLAAELEEQRAEAEK 415



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 44/133 (33%), Gaps = 2/133 (1%)

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVS 212
                  +   L  +      +    ++   ++  L A L   + +   +   L E+ A +
Sbjct: 956  RAEAEKLAAELVEQRAEAEKLAAELVEQRAEAEKLAAELVEQRAEAEKLAAELVEQRAEA 1015

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            +    + E    ++  +L   + EQ+     +    +E   E      E+     + ++ 
Sbjct: 1016 EKLAAELEEKRAEAE-KLAAELEEQRAEAEKLAAELEEQRAEAEKLAAELEEQRAEAEKL 1074

Query: 273  FADEMSKLTILEK 285
             A+   K    EK
Sbjct: 1075 AAELEEKSAEAEK 1087


>gi|123375395|ref|XP_001297847.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121878181|gb|EAX84917.1| hypothetical protein TVAG_177680 [Trichomonas vaginalis G3]
          Length = 1066

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 85/216 (39%), Gaps = 12/216 (5%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           ++  T D+  L+ +   +L   +   +S ++  N + + +E+   + +   +    +   
Sbjct: 674 DNRTTFDMFCLQALVNTSLSNELSAVRSVVETQNVQLEHIEQILGTSDPDFVHESLENIE 733

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT----MMK 203
              +       S+ +   +++           +L +    L+  + S  ++L      ++
Sbjct: 734 KKIRKLKAKNKSL-KQFALQMQEAAEKIDGNANLRSIIDELKKQIDSQVQELEKRSQTIQ 792

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRE-------NIHEQKNMLRHINELYDEANLEFA 256
           NL ++ +  Q  +  +E  +     E+R+        + + +  +   N+   EAN++ +
Sbjct: 793 NLEKEKSEKQATIEAREAEIANLKNEIRQTQFDHRAEVAQFEKTIFQSNQEVREANMKVS 852

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               E    L++ ++   D+  +    ++  E++ +
Sbjct: 853 QSSVEFEAKLQEQKKIAEDDRQREIAKQEKLERQIL 888



 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 79/234 (33%), Gaps = 27/234 (11%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L T +     + ++  +  I+ L+    + K     +    + ++     R   ++D 
Sbjct: 715 QILGTSDPDFVHESLENIEKKIRKLKAKNKSLKQFALQMQEAAEKIDGNANLR--SIIDE 772

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA-LLSSHQKDLT 200
           L K   +  +       ++    K K  +  +I     ++ N  + +R        +   
Sbjct: 773 LKKQIDSQVQELEKRSQTIQNLEKEKSEKQATIEAREAEIANLKNEIRQTQFDHRAEVAQ 832

Query: 201 MMKNLFEKNA--------VSQNDL---NQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             K +F+ N         VSQ+ +    + +     +  + +  I +Q+ + R I  L +
Sbjct: 833 FEKTIFQSNQEVREANMKVSQSSVEFEAKLQEQKKIAEDDRQREIAKQEKLERQILSLKE 892

Query: 250 EAN-------------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +                + A  L E+   L+Q      + +   +   +  ++K
Sbjct: 893 KIRKADIAAKQRENDYSKEAQKLVEVQNQLKQKLTDSIESLKTQSAENQELQRK 946


>gi|110680751|ref|YP_683758.1| multidrug resistance efflux pump, putative [Roseobacter
           denitrificans OCh 114]
 gi|109456867|gb|ABG33072.1| multidrug resistance efflux pump, putative [Roseobacter
           denitrificans OCh 114]
          Length = 358

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 10/172 (5%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
             +N    +    +  +I ++G          +    SS   +   +VV+I    SG I 
Sbjct: 3   QSKNPAGRIGLAVVAILIFLVGF-----YALTDRLAPSSARGIVTAHVVQIAPRVSGRIT 57

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  VE+ + +  G PL + +       +   + ++ +   +ID   ++L           
Sbjct: 58  QVHVEDDAIVQAGDPLFSIDPRPFALAVAQAEANLASTTQNIDASSASLVAAQASVTQAR 117

Query: 129 KAFESREEQL-----LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            A E+   Q      L+  G             ++     L      + S  
Sbjct: 118 TALETTRAQAERTFRLEERGIAAKAQGDTARGQVADAEARLATAEANLDSAR 169



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 24/226 (10%), Positives = 64/226 (28%), Gaps = 24/226 (10%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             S   + F   ++    +L      + +   + +  +   +  R  L + +        
Sbjct: 73  LFSIDPRPFALAVAQAEANLASTTQNIDASSASLVAAQASVTQARTALETTRAQAERTFR 132

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E+   ++   +     V  +   L        +    +                    
Sbjct: 133 LEERGIAAKAQGDTARGQVADAEARLATAEANLDSARTALGPQ----------------- 175

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
              ++    A   ++L   +      T+ +P  G +      S   +A    P +  +  
Sbjct: 176 --GEDNPAIAAAQAQLEQAQYDLASATVKAPHYGVVTNV-VLSVGQFANAGNPALTFI-D 231

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +   +I   +   Q+Q++  G    + F        + F+  +  I
Sbjct: 232 ADAIWITVDLRENQLQNIDPGDPVGLLFDA---APGQIFEGRVLSI 274


>gi|77460015|ref|YP_349522.1| secretion protein HlyD [Pseudomonas fluorescens Pf0-1]
 gi|77384018|gb|ABA75531.1| putative HlyD family efflux pump protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 373

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 45/373 (12%), Positives = 102/373 (27%), Gaps = 82/373 (21%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            +V  I    +G I++  V +  ++  G  L+               +  ++ R ++   
Sbjct: 63  GDVTVIGPKVAGYIEEVLVSDNQKVKAGDVLIR--------------LDARDYRANLAKA 108

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           + A+         L+   + ++  +        +  ++                      
Sbjct: 109 EGAVAAEEALLANLDATEQLQQAVIGQARAGIDAASAETARSR----------------- 151

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                                   D    K L   NAVS     + +     +     + 
Sbjct: 152 -----------------------DDNARYKRLVTTNAVSVESAQRADATFKTAQALSAKA 188

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             E     R +        +E        +    + +R  A                 + 
Sbjct: 189 QAELLAAQRQL------TVIETQKQQARAALQQARAERDLAQL---------NLGYTELR 233

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P+ G I  N+      YAQ     + +VP S   ++ A     Q+  +K G   ++R  
Sbjct: 234 APVDGVI-GNRRARVGAYAQAGSQQLSVVPASG-LWVDANFKEDQLARMKPGQRVSIRA- 290

Query: 354 HYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNN----IEL 405
               +  ++F   ++ + P    Q         T  + +++ ++      D        L
Sbjct: 291 --DVLSGQEFHGRLDSLAPASGSQFSVLPPENATGNFTKIVQRVPVRILLDPADGVLGHL 348

Query: 406 RNGFPAEVLFTAK 418
           R G         +
Sbjct: 349 RPGLSVTAEVDTR 361


>gi|71418478|ref|XP_810864.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70875461|gb|EAN89013.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 911

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 73/207 (35%), Gaps = 6/207 (2%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +     +  +  ++  LR  ++        L ++      A  + E QL +      +  
Sbjct: 644 VTLERQLQERDDALAALRDRLEEYSREKSALESRSSESVDALAAMERQLKERDDALAALR 703

Query: 150 SKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            ++  YG   S++       +  + ++     + ++  + LR  L  H ++ + +++   
Sbjct: 704 DRLEEYGREKSALESRSSESVDALAAMERQLQERDDALAALRDRLEEHGREKSALESRSS 763

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           ++  +   + +Q +    +   LR+ + E       +     E+     + L  + R L+
Sbjct: 764 ESVDALAAMERQLQERDDALAALRDRLEEYGREKSALESRSSES----VDALAAMERQLQ 819

Query: 268 QNQRTFADEMSKLTILEKTREQKTILS 294
           +     A    +L    + +      S
Sbjct: 820 ERDDALAALRDRLEEYGREKSALESRS 846



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 74/215 (34%), Gaps = 11/215 (5%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L T E       +  +  ++  LR  ++        L ++         + E QL + 
Sbjct: 557 DVLATLE-----RQLQERDDALAALRDRLEEYGREKSALESRSSESVDVVVTLERQLQER 611

Query: 142 LGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                +   ++  YG   S++       +  + ++     + ++  + LR  L  + ++ 
Sbjct: 612 DDALAALRDRLEEYGREKSALESRSSESVDVVVTLERQLQERDDALAALRDRLEEYSREK 671

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           + +++   ++  +   + +Q +    +   LR+ + E       +     E+     + L
Sbjct: 672 SALESRSSESVDALAAMERQLKERDDALAALRDRLEEYGREKSALESRSSES----VDAL 727

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             + R L++     A    +L    + +      S
Sbjct: 728 AAMERQLQERDDALAALRDRLEEHGREKSALESRS 762



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 67/184 (36%), Gaps = 6/184 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +  +  ++  LR  ++        L ++      A  + E QL +      +   ++
Sbjct: 731 ERQLQERDDALAALRDRLEEHGREKSALESRSSESVDALAAMERQLQERDDALAALRDRL 790

Query: 153 FNYGI--SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             YG   S++       +  + ++     + ++  + LR  L  + ++ + +++   ++ 
Sbjct: 791 EEYGREKSALESRSSESVDALAAMERQLQERDDALAALRDRLEEYGREKSALESRSSESV 850

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            +   + +Q +    +   LR+ + E       +     E+     + L  + R L++  
Sbjct: 851 DALAAMERQLQERDDALAALRDRLEEHGREKSALESRSSES----VDALAAMERQLQERD 906

Query: 271 RTFA 274
              A
Sbjct: 907 DALA 910


>gi|260566136|ref|ZP_05836606.1| gram-negative bacterial RTX secretion protein D [Brucella suis bv.
           4 str. 40]
 gi|260155654|gb|EEW90734.1| gram-negative bacterial RTX secretion protein D [Brucella suis bv.
           4 str. 40]
          Length = 355

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 152


>gi|239815544|ref|YP_002944454.1| efflux transporter RND family, MFP subunit [Variovorax paradoxus
           S110]
 gi|239802121|gb|ACS19188.1| efflux transporter, RND family, MFP subunit [Variovorax paradoxus
           S110]
          Length = 416

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/146 (10%), Positives = 54/146 (36%), Gaps = 12/146 (8%)

Query: 38  LPIEISVSSSGEI----LNEDNVVEIK-----SPFSGIIKKFQVENGSQILQGTPLLTFE 88
            P+ ++  +S EI         +  ++     S  +G ++      G+ + QG  L+T +
Sbjct: 53  TPVSVATVASSEINAWDEFSGRLEAVQRVDVRSRVAGAVQSVHFREGALVKQGDLLITID 112

Query: 89  DIETTDLIDLKKVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                  ++  +  + + +       +E+     L ++  + ++ ++ R     +     
Sbjct: 113 PAPYAAEVERAEAQVASAQARQAFSRSEQERAKRLWDQQAIAQREYDERVNAAREAEANL 172

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRM 171
            +  + + +  ++  Y  ++  +   
Sbjct: 173 RAAQASLQSARLNLGYTQVRAPVAGR 198



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 52/153 (33%), Gaps = 10/153 (6%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE--KNAVSQNDLNQQERIVYKSTLE 229
           R   + R+D+ ++ +     +   +  L    +L      A    ++ + E  V  +   
Sbjct: 74  RLEAVQRVDVRSRVAGAVQSVHFREGALVKQGDLLITIDPAPYAAEVERAEAQVASAQAR 133

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              +  EQ+   R    L+D+  +    Y + ++    + +       + L         
Sbjct: 134 QAFSRSEQERAKR----LWDQQAIAQREYDERVNAA-REAEANLRAAQASLQSARLNLGY 188

Query: 290 KTILSPIAGTIVYNQSFSSSNYA--QQSQPLMK 320
             + +P+AG I   +  +  N        P++ 
Sbjct: 189 TQVRAPVAGRIGKLEV-TMGNLVAAGPGAPVLT 220


>gi|209967059|ref|YP_002299974.1| hypothetical protein RC1_3819 [Rhodospirillum centenum SW]
 gi|209960525|gb|ACJ01162.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 466

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 2/114 (1%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  S  +  E++       ++SP +G++++  V+    +  G  LLT +  E T  +++
Sbjct: 217 PVRQSALAPAEVVPRTPT-LVRSPLTGVVERIHVQPNQTVAAGDLLLTLDPTELTTKLNV 275

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +         T+ + L   + +        E+R  Q    +G       +V
Sbjct: 276 AVKARDVALAEY-TQAAQLAVFDPEAKARMAVLEARLAQQELEVGFLRDMLGRV 328



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 37/102 (36%), Gaps = 4/102 (3%)

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT-IVYNQSFSSSN 310
             + A +  E    +   +   A +  ++  L     +  I +P AG  +  + +     
Sbjct: 290 AAQLAVFDPEAKARMAVLEARLAQQELEVGFLRDMLGRVAIRAPEAGVAVFDDPNDWLGR 349

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
              Q + +M +V       +  +++      ++ G  A V+F
Sbjct: 350 PVSQGERVM-LVADPGRVELEIRLSAGDAVTLRPG--AEVQF 388


>gi|171676271|ref|XP_001903089.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936201|emb|CAP60861.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1138

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 82/220 (37%), Gaps = 18/220 (8%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV---LEKAFESREEQLLDFLGK 144
           + +E    +   +   + L+  I   +  ++       V   L+   ES +++  D   K
Sbjct: 618 DHVEAKQRLKELEAEKRELKERIAELEKEVETAAAGAQVNTKLQGEHESLKQEFDDLKMK 677

Query: 145 YHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +  S +        + Y+ L      ++       +L  +S+LL+          T +
Sbjct: 678 SSTLQSDLAAAQQLAQTRYKDLTDLREMLQKAQPELKNLRQESALLKTTKEELAAKTTEL 737

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELR---ENIHEQKNMLRHINELY----------D 249
           +NL ++    + +L + +R+      E++   E + ++ N    + +            +
Sbjct: 738 RNLEKRERDLKTELARAQRLATDREAEIKTLHEKVAQETNARLKVEDERRVTGRDLRRSE 797

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              +E +   ++ SR+L++ Q   +    ++  LE    +
Sbjct: 798 AEKIEISAREEKASRELQRVQEEASKLRPRVGQLEDELNR 837



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 67/210 (31%), Gaps = 6/210 (2%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           L  E     + +  K   I+ L     TE+   + + N  + L        E       K
Sbjct: 570 LQTELTRLQEELAEKDQRIERLSKQRKTEEDLREEIENLQENLMTIGHDHVEAKQRL--K 627

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMR---SIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                 +     I+ + + ++      +    +      L+ +   L+   S+ Q DL  
Sbjct: 628 ELEAEKRELKERIAELEKEVETAAAGAQVNTKLQGEHESLKQEFDDLKMKSSTLQSDLAA 687

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L +       DL +  +        LR+     K     +     E         ++
Sbjct: 688 AQQLAQTRYKDLTDLREMLQKAQPELKNLRQESALLKTTKEELAAKTTELRN-LEKRERD 746

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +  +L + QR   D  +++  L +   Q+T
Sbjct: 747 LKTELARAQRLATDREAEIKTLHEKVAQET 776


>gi|152995699|ref|YP_001340534.1| hypothetical protein Mmwyl1_1673 [Marinomonas sp. MWYL1]
 gi|150836623|gb|ABR70599.1| conserved hypothetical protein [Marinomonas sp. MWYL1]
          Length = 446

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 65/150 (43%), Gaps = 8/150 (5%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W+       +   R+  L  I ++GL+      P+ ++V +  EI+ ++++  + S  +G
Sbjct: 169 WRAWLSGLNSKKVRLGALIAIVLLGLV------PVRLTVLAPAEIIAKESL-LVTSAIAG 221

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID-TEKSALDFLNNKY 124
            +++  V+ G Q++   PL+  +  E     D+ +  ++  +  +   E++       K 
Sbjct: 222 AVREVLVKPGDQVVIDQPLVQMDRTEFQGAFDVAQRELERTQAELRTAEQAGYVDRRKKS 281

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           ++ E   +   + +     K   + +++  
Sbjct: 282 ELAELESQVELKTIERDYLKTKLSQTQILA 311


>gi|40074272|gb|AAR39422.1| adventurous gliding protein Z [Myxococcus xanthus]
          Length = 1395

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 75/206 (36%), Gaps = 5/206 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                 D  +  +      ++ + +      ++  + + A E+   Q ++       T  
Sbjct: 448 RLNAERDALEAKLSQQVADLEADLARTMGERDQLRLDKDAQEAELTQRIEERDAKLGTLE 507

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKNLFEKN 209
           +  +  I+    +       ++       +LE +   ++  L   + +LT  ++ L +  
Sbjct: 508 RELSETIARNEHTEAELNANIQQQLERIGELEGEVEAVKTHLEDRENELTAELQALGQAK 567

Query: 210 AVSQNDLNQQERIVYKS----TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
              + DLN + + + ++      +L   + E ++    +            + L+E  R 
Sbjct: 568 DELETDLNDRLQALSQAKDALEADLSRQLEELRSAKAELEADLTGQIQALTSQLEETQRQ 627

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT 291
           L+ +QRT     +++  LE T  Q+ 
Sbjct: 628 LDDSQRTGEQLSARVAQLEDTVSQRE 653



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 68/201 (33%), Gaps = 9/201 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E    I  +   I  L   ++  K+ L+   N+     +A      Q  D L    +   
Sbjct: 523 ELNANIQQQLERIGELEGEVEAVKTHLEDRENELTAELQAL----GQAKDELETDLNDRL 578

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +  +    ++   L  +L  +RS       DL  +   L + L   Q+ L   +   E+ 
Sbjct: 579 QALSQAKDALEADLSRQLEELRSAKAELEADLTGQIQALTSQLEETQRQLDDSQRTGEQ- 637

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
                 + Q E  V +    +     +     + I+EL  +     +  L +  + L Q 
Sbjct: 638 --LSARVAQLEDTVSQRESTIESLQGDVAARDQRISELSGDLEAT-SQTLAQTQQTLAQT 694

Query: 270 QRTFADEMSKLTILEKTREQK 290
           ++  AD  + L   E    + 
Sbjct: 695 EQQLADTQNTLASTEGALAET 715



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 67/205 (32%), Gaps = 5/205 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +T   ++  + +++     +       D    +   L  A ++ E++L   +G   S  S
Sbjct: 798  QTHAALEDTRGALQETSDTLAHTTRERDQRIAELADLGAAKDALEQELTGQIGHLRSELS 857

Query: 151  KV---FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-LF 206
            +    +    ++  +        +  +   R  L ++       L      L   ++ L 
Sbjct: 858  ETQGNYEAERAAHEKLAAESSAHIGDLTSERDGLRSELEATSQTLEQTHGQLAATRDALA 917

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             +    Q               +L E     +++  H+     E     A  L +++  L
Sbjct: 918  REQHAHQESRKAAASTQTTLEGQLAEARAHGEDLGEHLTLTKHELGTRVAE-LTQLTATL 976

Query: 267  EQNQRTFADEMSKLTILEKTREQKT 291
             Q + T A    +L  L +  +++ 
Sbjct: 977  AQTENTRAHLEERLHTLTEESQRRE 1001


>gi|85710487|ref|ZP_01041551.1| Secretion protein HlyD [Erythrobacter sp. NAP1]
 gi|85687665|gb|EAQ27670.1| Secretion protein HlyD [Erythrobacter sp. NAP1]
          Length = 440

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 65/211 (30%), Gaps = 8/211 (3%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKN--MLRHINELYDEANLEFANYLKEISR 264
           ++ A S+ +LN     + ++   L     +      +R ++     + +E        +R
Sbjct: 123 QQIAQSRANLNAARASLVQAQASLEATNAQLVRFREVRELSGGRVPSLIELDQAEAAAAR 182

Query: 265 D---LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--SQPLM 319
           D   +   +       + L     TR +  I +P+ G ++  Q            +  L 
Sbjct: 183 DEAAVSSARANIQAAEATLRANLTTRSRAVIRAPVTGVVLARQIEVGQTVVAAFNTVTLF 242

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-IISQQD 378
            I        +R  +    +  V  G  AT     Y   R       ++      +++Q 
Sbjct: 243 VIAEDLAAMQLRVSIDEADVGQVAAGQDATFTVDAYPGRRFPATLDRVDLASGNTVNEQA 302

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                     V+     L+  +    LR G 
Sbjct: 303 GGAAAAAGASVVNYEARLSVQNPEGLLRPGM 333



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 17/140 (12%), Positives = 54/140 (38%), Gaps = 2/140 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E++V+++G +   + V  + S  +G + +  V+   ++ +G  +           I   
Sbjct: 70  LELTVTATGNLRPTNQV-TVGSEVTGPVDQVLVDVNDRVTRGQVIAIINTEIIDQQIAQS 128

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           + ++   R  +   +++L+  N +     +  E    ++   +        +      +S
Sbjct: 129 RANLNAARASLVQAQASLEATNAQLVRFREVRELSGGRVPSLIELDQAEAAAARDEAAVS 188

Query: 159 SVYRSLKMKLTRMRSIYLNR 178
           S   +++     +R+    R
Sbjct: 189 SARANIQAAEATLRANLTTR 208


>gi|317152567|ref|YP_004120615.1| RND family efflux transporter MFP subunit [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316942818|gb|ADU61869.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 412

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 65/175 (37%), Gaps = 6/175 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               VEI++  SG ++    E G ++  G  L   +       +DL +  + + R     
Sbjct: 82  ASQTVEIRARVSGFLESRHFEEGGEVTTGQLLFRIDPRSFQASLDLARAQLASARAEFAL 141

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +S +    ++Y  L ++  + +++L  +  +     + +       V   L +  T + 
Sbjct: 142 ARSKV----SRYTKLRQSNATTQDELEQWQTEEQVAQANITIANARIVNSELDLGYTDIT 197

Query: 173 SIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           S    R+   L+   S +          +     ++ +  VS+ DL Q  R+   
Sbjct: 198 SPMDGRIGMALKEVGSYVEGSSGGLLAVVEKTDPIYVRYTVSEQDLLQARRLAQS 252



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 37/306 (12%), Positives = 90/306 (29%), Gaps = 35/306 (11%)

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +   +  +           ++ M     R++ L  L L    +     + +        +
Sbjct: 40  QGSDSTPQAMQARGPQRALAVSMLTLSARTVPLQPLFLGQTEASQTVEIRARVSGFLESR 99

Query: 204 NLFEKNAVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHINE--LYDEANLEF 255
           +  E   V+   L         +  +  +  +L     E       ++      ++N   
Sbjct: 100 HFEEGGEVTTGQLLFRIDPRSFQASLDLARAQLASARAEFALARSKVSRYTKLRQSNATT 159

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA-QQ 314
            + L++   + +  Q       +++   E       I SP+ G I         +Y    
Sbjct: 160 QDELEQWQTEEQVAQANITIANARIVNSELDLGYTDITSPMDGRI-GMALKEVGSYVEGS 218

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVK----KGYTA-------TVRFPHYADIREKKF 363
           S  L+ +V  +   Y+R  V+ + +   +     G T+        ++           +
Sbjct: 219 SGGLLAVVEKTDPIYVRYTVSEQDLLQARRLAQSGKTSQPLQSQMRLKVTLADGTPYP-Y 277

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           +  I   DP I    ++            +    F + + +L  G    V     +    
Sbjct: 278 EGKITYTDPQIDPSTSS-----------SVMRGTFPNPDGQLMPGQFVHVRIDGIDR--L 324

Query: 424 QEIIHP 429
             ++ P
Sbjct: 325 NALLVP 330


>gi|169634389|ref|YP_001708125.1| HlyD family secretion protein [Acinetobacter baumannii SDF]
 gi|169153181|emb|CAP02271.1| putative secretion protein (HlyD family) [Acinetobacter baumannii]
          Length = 446

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 79/232 (34%), Gaps = 32/232 (13%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDL 266
             ++Q D   QE  +  S   ++    ++   +  +NE   E   +   Y ++     DL
Sbjct: 87  QLIAQIDSTTQENSLKTSDANIKNLEAQRLQQVASLNEKQLEYRRQQQMYAQDATPRADL 146

Query: 267 EQNQRTFADEMSKLTILEKTRE--------------QKTILSPIAGTIVYNQSFSSSNYA 312
           E  +  +    +++  L+   E                 I++P  GT+V           
Sbjct: 147 ESAEAAYKTAQAQVKALDAQIESAKVTRSTAQTNIGYTRIVAPTDGTVVAI-VTEEGQTV 205

Query: 313 QQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +Q    IV  +  +   I+A+V+   I  V+KG      F    D  ++       + 
Sbjct: 206 NANQSAPTIVKIAKLQNMTIKAQVSEADIMKVEKGQQVY--FTTLGDETKRYATLRQIEP 263

Query: 371 DPIISQQDNNLQTQE------YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            P     ++N  T        YY  +  +      + + +LR    A+V   
Sbjct: 264 APDSISSESNSTTSSTTSSAVYYNALFDVP-----NTDGKLRIDMTAQVYIV 310



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 56/150 (37%), Gaps = 10/150 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     ++ + +  SG +KK  V+ G Q+ QG  +   +     + +   
Sbjct: 46  IENNVLATGTLDA-TKLISVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSTTQENSLKTS 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +IKNL      + ++L+         EK  E R +Q +           +       +
Sbjct: 105 DANIKNLEAQRLQQVASLN---------EKQLEYRRQQQMYAQDATPRADLESAEAAYKT 155

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               +K    ++ S  + R   +      R
Sbjct: 156 AQAQVKALDAQIESAKVTRSTAQTNIGYTR 185


>gi|194442427|ref|YP_002040142.1| macrolide transporter subunit MacA [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194401090|gb|ACF61312.1| macrolide-specific efflux protein MacA [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
          Length = 372

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 58/202 (28%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ER    + L+L      ++  L     +  +     A  +      +          
Sbjct: 112 LNAERQQAAAELKLARVTLARQQQLAKTLAVSQQDLDTAATEMAVKQARIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   E   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 RASLDTAKTNLEYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A          R        E +   I      +    +Y    ++ 
Sbjct: 231 SEADVIHLRAGQKAWFTIAGDPQTRY-------EGVLKDILPTPEKINDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
           +         LR    A+V   
Sbjct: 284 NPKRI-----LRLDMTAQVYIQ 300



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 28/231 (12%)

Query: 18  KRMTLLSIIGIIGLITW-SILLPI-------------EISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+  W  I  P+             E SV ++G++     V ++ +  
Sbjct: 11  RYLVIILILLVGGMAGWRMINAPLPTYQTLIVRPGDLEQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +K   V  G  + +   L   +  +  + I   + ++  L        + L      
Sbjct: 70  SGQLKTLLVSIGDNVKKDQLLGVIDPDQAENQIKEVEATLMELNAERQQAAAELKLARVT 129

Query: 122 -NKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMR--SIYL 176
             +   L K     ++ L     +     +++   +  I     SL    T +    I  
Sbjct: 130 LARQQQLAKTLAVSQQDLDTAATEMAVKQARIGTIDAQIKRNRASLDTAKTNLEYTRIVA 189

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFE------KNAVSQNDLNQQER 221
                  + + L+       +    +  L +      K  VS+ D+     
Sbjct: 190 PMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLRA 240


>gi|163843610|ref|YP_001628014.1| HlyD family secretion protein [Brucella suis ATCC 23445]
 gi|254702078|ref|ZP_05163906.1| HlyD family secretion protein [Brucella suis bv. 5 str. 513]
 gi|256061417|ref|ZP_05451561.1| HlyD family secretion protein [Brucella neotomae 5K33]
 gi|261325422|ref|ZP_05964619.1| secretion protein HlyD family protein [Brucella neotomae 5K33]
 gi|261752647|ref|ZP_05996356.1| secretion protein HlyD family protein [Brucella suis bv. 5 str.
           513]
 gi|163674333|gb|ABY38444.1| HlyD family secretion protein [Brucella suis ATCC 23445]
 gi|261301402|gb|EEY04899.1| secretion protein HlyD family protein [Brucella neotomae 5K33]
 gi|261742400|gb|EEY30326.1| secretion protein HlyD family protein [Brucella suis bv. 5 str.
           513]
          Length = 355

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 152


>gi|153001033|ref|YP_001366714.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS185]
 gi|151365651|gb|ABS08651.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS185]
          Length = 354

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 78/205 (38%), Gaps = 16/205 (7%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E  AV + D  Q+ +++     + ++   ++      I E       +  N     + 
Sbjct: 73  LIESLAVEEGDRVQKGQVLAVIDAKRQQYDLDRSEAEVKIIEQELNRLKKMGNKEFISAD 132

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            + + +      ++K  + E    +  +LSPI+G +V  +   + N A++   L  IV +
Sbjct: 133 SMAKLEYNLQAAIAKKDLAELQVRESRVLSPISG-VVAKRYVKAGNMAKEFGDLFYIV-N 190

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
               +    +  +Q+  ++ G  A V F       +    A + +I PI+  Q       
Sbjct: 191 QDELHGIVHLPEQQLASLRLGQEAQV-FS--NQQSKNAIHAKVLRISPIVDPQSGT---- 243

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
             ++V L + +         L+ G 
Sbjct: 244 --FKVTLAVPNQEA-----RLKAGM 261



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 14/171 (8%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S  SG+I+   VE G ++ +G  L   +       +D  +  +K     I+ E + L 
Sbjct: 66  VVSRISGLIESLAVEEGDRVQKGQVLAVIDAKRQQYDLDRSEAEVKI----IEQELNRLK 121

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            + NK  +   +    E  L   + K      +V    + S    +  K       Y+  
Sbjct: 122 KMGNKEFISADSMAKLEYNLQAAIAKKDLAELQVRESRVLSPISGVVAKR------YVKA 175

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            ++  +   L      +Q +L  + +L E+   S      QE  V+ +   
Sbjct: 176 GNMAKEFGDL--FYIVNQDELHGIVHLPEQQLASLR--LGQEAQVFSNQQS 222


>gi|88857561|ref|ZP_01132204.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           tunicata D2]
 gi|88820758|gb|EAR30570.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           tunicata D2]
          Length = 419

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 80/229 (34%), Gaps = 28/229 (12%)

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           +   ++      S + ++       +  +    LD+E           ++Q +L     L
Sbjct: 106 NPQLNEALIQAQSLLAKTNAQNKADLAQLGAQLLDVEASIVAAELDYQANQLELDAQTKL 165

Query: 206 FEKNA--VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                  VS+ D  + E  V +S       + +QK +++H  ++  +A  + AN      
Sbjct: 166 ISTGNSTVSKIDYQRTEFAVKRSK---NNWLIQQKRLIKHQEKIDAQAAAQHAN------ 216

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
                         + +   ++      + +P+AG +      +      QS  + KI  
Sbjct: 217 ---------IDALQADVIRHQQNINNLVVKAPVAGIVQAMPL-ALGQALMQSDEIAKIA- 265

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            S       +V   Q   ++ G   T+      D R+ +FK  + +IDP
Sbjct: 266 DSTRLLAEIQVDELQAGLIELGQHVTL------DTRQSQFKGSVSRIDP 308



 Score = 43.5 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 86/243 (35%), Gaps = 22/243 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           V   G++  +  +  + +P  G + +   + G+ + +G  +    +       I+   L+
Sbjct: 62  VRGLGKLKTD-QIYFVSTPVQGKVSQILRKAGNIVQEGDIIAVLTNPQLNEALIQAQSLL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
                  K     +  +   ++      ++  +A +   +     +   +ST SK+    
Sbjct: 121 AKTNAQNKADLAQLGAQLLDVEASIVAAELDYQANQLELDAQTKLISTGNSTVSKIDYQR 180

Query: 157 IS-SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ----KDLTMMKNLFEK--- 208
              +V RS    L + + +  ++  ++ +++   A + + Q    +    + NL  K   
Sbjct: 181 TEFAVKRSKNNWLIQQKRLIKHQEKIDAQAAAQHANIDALQADVIRHQQNINNLVVKAPV 240

Query: 209 -NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
              V    L   + ++    +     I +   +L  I    DE         + ++ D  
Sbjct: 241 AGIVQAMPLALGQALMQSDEI---AKIADSTRLLAEIQ--VDELQAGLIELGQHVTLDTR 295

Query: 268 QNQ 270
           Q+Q
Sbjct: 296 QSQ 298


>gi|299133640|ref|ZP_07026834.1| efflux transporter, RND family, MFP subunit [Afipia sp. 1NLS2]
 gi|298591476|gb|EFI51677.1| efflux transporter, RND family, MFP subunit [Afipia sp. 1NLS2]
          Length = 429

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 59/185 (31%), Gaps = 23/185 (12%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +  +   +  L  ++EL      +        + D++Q Q       ++L   +   ++ 
Sbjct: 117 QAQVGALEAQL-KLSELRLAQMTQLLERDSGRAFDVQQRQSEVDQLKAQLEGAKWNLDKT 175

Query: 291 TILSPIAGTIVYNQSFSSSNYAQ-QSQPLMKIVPHSKLTY-IRAKVTPKQIQHVK----- 343
            + +P  G +        +  +     P+M  +  S     I        I  +      
Sbjct: 176 VVRAPSDGYVTNVALRKGARVSNLPLSPVMAFIDTSDTLIGIE-------IDQIYARYLK 228

Query: 344 KGYTATVRFPHY--ADIREKKFKAIIEKIDPIISQQDNNLQTQE-----YYEVILKITDL 396
            G    V F  +    +   K + +++ I     Q      T +        V +++ D 
Sbjct: 229 AGQPVEVTF-KFRPGQVYTGKVETVLQAISAGQVQVSGTAVTPKGIQAGPLVVRIRLNDA 287

Query: 397 AFSDN 401
           A +++
Sbjct: 288 AVAED 292



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/136 (11%), Positives = 41/136 (30%), Gaps = 7/136 (5%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +L ++     I      P       SG  L     + I    +G +    VE  +++ 
Sbjct: 51  LLVLCLLMFGLFIPMGWGAP-------SGPTLVVRQSIAIVPDVAGEVIDVPVEPNTRLK 103

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G  L   + +     +   +  +K     +      L+  + +   +++     ++   
Sbjct: 104 AGDVLFKIDPVPYQAQVGALEAQLKLSELRLAQMTQLLERDSGRAFDVQQRQSEVDQLKA 163

Query: 140 DFLGKYHSTCSKVFNY 155
              G   +    V   
Sbjct: 164 QLEGAKWNLDKTVVRA 179


>gi|260775076|ref|ZP_05883975.1| probable RND efflux membrane fusion protein [Vibrio coralliilyticus
           ATCC BAA-450]
 gi|260608993|gb|EEX35153.1| probable RND efflux membrane fusion protein [Vibrio coralliilyticus
           ATCC BAA-450]
          Length = 368

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             + ++    + +  L+ T +++ I +P AG +V  ++     Y Q       IV     
Sbjct: 142 DAEASYFSLKADIESLKATIDRREIKAPFAG-VVGIRNVYLGQYLQAGT---DIVRLEDT 197

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V    I  +K G    +    Y +     F+  I  I+P ++ Q   +Q Q 
Sbjct: 198 SVMRLRFTVPQTDISRIKLGQQVDIFVDAYPET---PFEGSITAIEPAVNIQSGLIQVQ- 253

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +++ +LR+G  A    
Sbjct: 254 ----------ADIPNSDGKLRSGMFARANI 273



 Score = 43.1 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 46/135 (34%), Gaps = 5/135 (3%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G I     V  + +  +G+I K   ++G+ + +G PL+  +       +   +  
Sbjct: 57  VIEAIGFIEPNQGV-TVANETAGVIDKITFDSGTAVEEGQPLVLLDSEVEKADLKSSQAK 115

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   +      +     L  K  V ++AF+  E           S  + +    I + + 
Sbjct: 116 LPAAQAKYKRYQG----LYKKGSVSKEAFDDAEASYFSLKADIESLKATIDRREIKAPFA 171

Query: 163 SLKMKLTRMRSIYLN 177
            +          YL 
Sbjct: 172 GVVGIRNVYLGQYLQ 186


>gi|159128006|gb|EDP53121.1| cytoskeleton assembly control protein Sla2, putative [Aspergillus
           fumigatus A1163]
          Length = 1172

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 5/224 (2%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++ Q   L      +T   +   +    N R   + ++  L   + +   LE+    
Sbjct: 479 EQQRLAQEQLLREQYQTQTQGRLAELERENLNARAQYERDQLMLQQYDRRVKDLEEQMAQ 538

Query: 134 REEQLLDFLGKYHSTCSKVFNYGI---SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               L +          +     +    S Y +L    +++R  +L+ L       L  A
Sbjct: 539 LTTNL-NMQNASKDEQIRALQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTTKSLKLKAA 597

Query: 191 LL-SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               + +K   + + L  KN    + + +++R ++        N  E + + R +    +
Sbjct: 598 SAQEAIEKREKLERELKTKNLELADMIRERDRALHDRDRLTGTNKEELEKLKRELRLAIE 657

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            A     +   EIS  L +  R  AD    L    +  E+ +  
Sbjct: 658 RAENAERSKGTEISTLLSKYNREMADLEEALRNKTRALEEISSR 701



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 77/211 (36%), Gaps = 7/211 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            FE+ +       +    + LR    T+         + ++  +A   R++ +L    + 
Sbjct: 469 EFEEQQRLQAEQQRLAQEQLLREQYQTQTQGRLAELERENLNARAQYERDQLMLQQYDRR 528

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD----LTM 201
                +      +++      K  ++R++        +K   L  L S  +++    L  
Sbjct: 529 VKDLEEQMAQLTTNLNMQNASKDEQIRALQEQVNTWRSKYEALAKLYSQLRQEHLDLLQT 588

Query: 202 MKNLFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            K+L  K A +Q  + +    ER +    LEL + I E+   L   + L      E    
Sbjct: 589 TKSLKLKAASAQEAIEKREKLERELKTKNLELADMIRERDRALHDRDRLTGTNKEELEKL 648

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +E+   +E+ +     + ++++ L     +
Sbjct: 649 KRELRLAIERAENAERSKGTEISTLLSKYNR 679


>gi|129563832|gb|ABO31103.1| skeletal muscle myosin heavy chain [Siniperca knerii]
          Length = 1937

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 81/214 (37%), Gaps = 12/214 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ----LLDFLG 143
            +  E+ + ++ K  S++  +  +  E   L     + + L    + ++      L ++  
Sbjct: 1402 DAEESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQ 1461

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY    +++   G     RSL  +L +M++ Y   LD   +   ++    + Q++++ + 
Sbjct: 1462 KYEEGQAEL--EGAQKEARSLSTELFKMKNSYEESLD---QLETMKRENKNLQQEISDLT 1516

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                +   S ++L + ++ V     E++  + E +  L H         LE      E+ 
Sbjct: 1517 EQIGETGKSIHELEKAKKTVETEKTEIQSALEEAEGTLEHEEAKILRVQLELNQIKGEVD 1576

Query: 264  RDLEQNQRTFADEM---SKLTILEKTREQKTILS 294
            R L +             ++    ++     + S
Sbjct: 1577 RKLAEKDEEMEQIKRNSQRVMDSMQSALDSEVRS 1610



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K+     L   I+ E+S    L  K   L+   
Sbjct: 1059 EGDLKLAQESIMDLENDKQQSDEKIKKKEFETSQLLSKIEDEQSLGAQLQKKIKELQACI 1118

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1119 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQK 1176

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            L    ++ T+                   +    S  EL E I   + + + + +   E 
Sbjct: 1177 LRRDLEEATLQHEATAS---------ALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1227

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +       + +   +LE+  RT  D+ S+L        ++
Sbjct: 1228 KMEIDDLSSNMEAVAKAKGNLEKMCRTLEDQFSELKSKNDETVRQ 1272



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 80/241 (33%), Gaps = 22/241 (9%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREEQLLD 140
            L  +  ++   +  +  +++ ++  ++ EKS     +D L++  + + KA  + E+    
Sbjct: 1195 LRKKQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLSSNMEAVAKAKGNLEKMCRT 1254

Query: 141  FLGKYHSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
               ++    SK       ++ +        T          + E   S L     +  + 
Sbjct: 1255 LEDQFSELKSKNDETVRQLNDINAQKARLQTENGEYSRQLEEKEALVSQLTRGKQAFTQQ 1314

Query: 199  LTMMKNLFEKNAVSQNDLNQQER--------------IVYKSTLELRENIHEQKNMLRHI 244
            +   K   E+   ++N L    +                 ++  EL+  + +  + +   
Sbjct: 1315 IEEFKRHVEEEVKAKNALAHAVQSARHDCDLLTENFEEEQEAKAELQRGMSKANSEVAQW 1374

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               Y+   ++    L+E  + L Q  +   + +  +     + E+      + G +    
Sbjct: 1375 RSKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVNSKCASLEKTKQR--LQGEVEDLM 1432

Query: 305  S 305
             
Sbjct: 1433 I 1433


>gi|146306208|ref|YP_001186673.1| RND family efflux transporter MFP subunit [Pseudomonas mendocina
           ymp]
 gi|145574409|gb|ABP83941.1| efflux transporter, RND family, MFP subunit [Pseudomonas mendocina
           ymp]
          Length = 421

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 55/168 (32%), Gaps = 8/168 (4%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + E       +EL     E++  L       ++  L+    L+E    L   ++     
Sbjct: 161 LRSEMAAAARRVELARTTFERERQLWKDGISAEQDYLQARQTLQEAEIALANARQKGKTI 220

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
             +    +    +  + +P +G +V            ++      V      ++   V+P
Sbjct: 221 SPQGEAGDG--SRYNLRAPFSGVVVEKHLV-PGEVVSETSNAFT-VADLSRVWVTFSVSP 276

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           + ++ VK G +  V  P       ++    +  I  ++ +Q      +
Sbjct: 277 RDLEQVKVGQSVRVSAPELG----REATGKVAYISRLLGEQTRTATGR 320



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 41/104 (39%), Gaps = 5/104 (4%)

Query: 47  SGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
            GE+  ++     +  P +G++++  V  G ++  G  L T    + ++L      + + 
Sbjct: 112 PGEVNFDEERTAHVVPPSAGVVERVLVGLGQKVAAGDGLATIVSQQVSELRSEMAAAARR 171

Query: 106 LR-CHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKY 145
           +       E+      D ++ + D L+     +E ++     + 
Sbjct: 172 VELARTTFERERQLWKDGISAEQDYLQARQTLQEAEIALANARQ 215


>gi|120612961|ref|YP_972639.1| secretion protein HlyD family protein [Acidovorax citrulli AAC00-1]
 gi|120591425|gb|ABM34865.1| secretion protein HlyD family protein [Acidovorax citrulli AAC00-1]
          Length = 322

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/136 (11%), Positives = 39/136 (28%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +  +  ++E+     G++    V  G  + +G  LL            + +  ++   
Sbjct: 63  GRVEVQGGMLELSPLQEGVVDTVAVHEGQAVKRGQVLLRLSGTGLQAEAGVAQAELQLAE 122

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                    +  L      L +A  +   +         +  +   +  ++     +  K
Sbjct: 123 ARERARAQQVPALRRAAARLAEAAAANAAEPQRAEDAAQALRAAESDAAVARAEVEVARK 182

Query: 168 LTRMRSIYLNRLDLEN 183
                     RL+L  
Sbjct: 183 KLAQVRGQQARLELRA 198



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 50/151 (33%), Gaps = 8/151 (5%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLEL--RENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           L  +  V+Q +L   E        ++        +       N    +   + A  L+  
Sbjct: 107 LQAEAGVAQAELQLAEARERARAQQVPALRRAAARLAEAAAANAAEPQRAEDAAQALRAA 166

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY---AQQSQPLM 319
             D    +        KL  +   + +  + +P  GT+V     + +     A      +
Sbjct: 167 ESDAAVARAEVEVARKKLAQVRGQQARLELRAPEDGTVV--HVRAQAGVRLAAAAGHAAI 224

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            ++P  +   +RA+V       VK G  ATV
Sbjct: 225 TLLP-HRPLVVRAEVNQNYAAAVKPGMRATV 254


>gi|21244572|ref|NP_644154.1| membrane fusion protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|21110249|gb|AAM38690.1| membrane fusion protein precursor [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 414

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/135 (10%), Positives = 44/135 (32%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +     G +     + G ++ +G  L   +        D    + 
Sbjct: 64  ASALGTVT-ALNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAK 122

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +      N+      V     +++  Q+  +     +  +++ +  +   
Sbjct: 123 RQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVAANDAQMRSAQVQLQ 182

Query: 161 YRSLKMKLTRMRSIY 175
           +  +   +  +  I 
Sbjct: 183 FTRVTAPIDGIAGIR 197



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 53/146 (36%), Gaps = 5/146 (3%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEI 262
            +K   ++Q D    +    ++    R+N         +     D A  ++ +   L   
Sbjct: 97  VKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQ 156

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + Q +   A   +++   +   +   + +PI G I   +     N    S  ++ + 
Sbjct: 157 RNQVAQYEAAVAANDAQMRSAQVQLQFTRVTAPIDG-IAGIRGVDVGNIVTSSSTIVTLT 215

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTA 348
              +  Y+   +  +++Q V+ G TA
Sbjct: 216 -QIRPIYVSFNLPERELQAVRTGQTA 240


>gi|194438730|ref|ZP_03070817.1| macrolide-specific efflux protein MacA [Escherichia coli 101-1]
 gi|253774092|ref|YP_003036923.1| macrolide transporter subunit MacA [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160993|ref|YP_003044101.1| macrolide transporter subunit MacA [Escherichia coli B str. REL606]
 gi|256023495|ref|ZP_05437360.1| macrolide transporter subunit MacA [Escherichia sp. 4_1_40B]
 gi|297516921|ref|ZP_06935307.1| macrolide transporter subunit MacA [Escherichia coli OP50]
 gi|300928425|ref|ZP_07143958.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           187-1]
 gi|300950105|ref|ZP_07164052.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           116-1]
 gi|300954454|ref|ZP_07166906.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           175-1]
 gi|301646321|ref|ZP_07246210.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           146-1]
 gi|307137506|ref|ZP_07496862.1| macrolide transporter subunit MacA [Escherichia coli H736]
 gi|331641399|ref|ZP_08342534.1| macrolide-specific efflux protein MacA [Escherichia coli H736]
 gi|194422362|gb|EDX38362.1| macrolide-specific efflux protein MacA [Escherichia coli 101-1]
 gi|242376693|emb|CAQ31406.1| macA, subunit of MacAB-TolC Macrolide Efflux Transport System
           [Escherichia coli BL21(DE3)]
 gi|253325136|gb|ACT29738.1| efflux transporter, RND family, MFP subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972894|gb|ACT38565.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli B str. REL606]
 gi|253977108|gb|ACT42778.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli BL21(DE3)]
 gi|300318604|gb|EFJ68388.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           175-1]
 gi|300450595|gb|EFK14215.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           116-1]
 gi|300463588|gb|EFK27081.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           187-1]
 gi|301075455|gb|EFK90261.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           146-1]
 gi|315619190|gb|EFU99769.1| macrolide-specific efflux protein macA [Escherichia coli 3431]
 gi|323942795|gb|EGB38960.1| efflux transporter [Escherichia coli E482]
 gi|323962991|gb|EGB58563.1| efflux transporter [Escherichia coli H489]
 gi|331038197|gb|EGI10417.1| macrolide-specific efflux protein MacA [Escherichia coli H736]
          Length = 371

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|330914905|ref|XP_003296831.1| hypothetical protein PTT_07027 [Pyrenophora teres f. teres 0-1]
 gi|311330861|gb|EFQ95083.1| hypothetical protein PTT_07027 [Pyrenophora teres f. teres 0-1]
          Length = 1117

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 68/219 (31%), Gaps = 12/219 (5%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES----------REEQ 137
           +     D +D     +++ R  +    + LD   ++   LE   E            +++
Sbjct: 282 DAKSAEDELDKLDAELESARAELKRRDTLLDEQEDQIKKLENKLEQAHNTQSAGNEEKDR 341

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            L+   K  +   +       S +  L  K  ++        DLE++   +     +  +
Sbjct: 342 QLEEQAKRIAELEEQLQSFKDSQHDDLAEKDRQLTERSEKIQDLEDQLRSVEREKDAQIE 401

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL--RENIHEQKNMLRHINELYDEANLEF 255
            L             Q    +Q+    +  L+    +   E   +  H+  +  E + EF
Sbjct: 402 KLQSKLASAADGKDEQIRELEQQLDEVERELDEADEQKRQELAVLEDHLRSMEREKDAEF 461

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               + +     +          +L + E   + +  L+
Sbjct: 462 RELQRRLQTAQNEKNAEMDALRERLELAESQGDNQVQLA 500



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 80/227 (35%), Gaps = 24/227 (10%)

Query: 91  ETTDLIDLKKVSIKNLRCHID----TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
               L+D ++  IK L   ++    T+ +  +  + + +   K     EEQL  F    H
Sbjct: 306 RRDTLLDEQEDQIKKLENKLEQAHNTQSAGNEEKDRQLEEQAKRIAELEEQLQSFKDSQH 365

Query: 147 STCSKV-------------FNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALL 192
              ++                  + SV R    ++ +++S   +  D  + +   L   L
Sbjct: 366 DDLAEKDRQLTERSEKIQDLEDQLRSVEREKDAQIEKLQSKLASAADGKDEQIRELEQQL 425

Query: 193 SSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENI----HEQKNMLRHINEL 247
              +++L        +  AV ++ L   ER       EL+  +    +E+   +  + E 
Sbjct: 426 DEVERELDEADEQKRQELAVLEDHLRSMEREKDAEFRELQRRLQTAQNEKNAEMDALRER 485

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + A  +  N ++   +     ++   D   +   +E    Q  + +
Sbjct: 486 LELAESQGDNQVQLAQQSANDARQKVVDIT-REKGVEIELLQSRVDA 531



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 76/221 (34%), Gaps = 13/221 (5%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKS------ALDFLNNKYDVLEKAFESREEQLLDFLGK 144
                 + K   +  LR  ++  +S       L   +      +    +RE+ +   L +
Sbjct: 467 RLQTAQNEKNAEMDALRERLELAESQGDNQVQLAQQSANDARQKVVDITREKGVEIELLQ 526

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                ++     +    R  +  + ++  +  +    E +   LR  L+   ++L  +++
Sbjct: 527 SRVDAAETKADELEDYRRQHQDAMQQIARLQRDASAYEQQLQQLRRDLNQKDRELEGVES 586

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANY--L 259
           L  +   +  +L      +Y    +++       E+  + R +  L  E +   +    +
Sbjct: 587 LRRERDDATQELTGLRTTLYTKDAQVQALNTATRERDALSRELATLRRERDNLISKMTSM 646

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQ--KTILSPIAG 298
           +E    L +        ++ L       E   +++ + ++G
Sbjct: 647 EEQVGALRKGNNDRDTLVANLRQERNDIESEMRSLRTAVSG 687



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 60/199 (30%), Gaps = 1/199 (0%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE-QLLDFLG 143
           L  E +  T  +      +K     +D  K  L     K          REE   L  L 
Sbjct: 207 LKSEKVTMTQDLRKYTKDLKAAEKELDEYKQRLSEYAEKVKRRHADEGIREEMDELRRLA 266

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +   +     +     +          +   R +L+ + +LL       +K    ++
Sbjct: 267 DERAAEIERLESKLEDAKSAEDELDKLDAELESARAELKRRDTLLDEQEDQIKKLENKLE 326

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                 +    + ++Q     K   EL E +   K+         D    E +  ++++ 
Sbjct: 327 QAHNTQSAGNEEKDRQLEEQAKRIAELEEQLQSFKDSQHDDLAEKDRQLTERSEKIQDLE 386

Query: 264 RDLEQNQRTFADEMSKLTI 282
             L   +R    ++ KL  
Sbjct: 387 DQLRSVEREKDAQIEKLQS 405


>gi|298708892|emb|CBJ30849.1| expressed unknown protein [Ectocarpus siliculosus]
          Length = 555

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/211 (9%), Positives = 61/211 (28%), Gaps = 7/211 (3%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L   +     + +   +  ++  R    TE++  + L         A  + +++      
Sbjct: 243 LAEADGRRAQEALARAQQDVERERARAKTERAKAEGLRAAAATAAAAASAAQQEKEKMQQ 302

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                          +        +  +R        L+ +    RA  + H+K+    +
Sbjct: 303 DQQRQEEARQRQERDAAAGGGGGLVEMLRREKEGADALQRRLDAARAASARHEKERKEWR 362

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           +       S+  L +  R   K   ++ + +         +     EA         +  
Sbjct: 363 S-------SKARLEELRRSWGKQLNKVEKKMRSMTKENAALRARVGEAERARDRADADSL 415

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              E+ +R      + L    +   ++ +++
Sbjct: 416 GHREELRRLTEQRDNLLLGATRLGGRRGLVA 446


>gi|283956018|ref|ZP_06373507.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792494|gb|EFC31274.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 390

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  ++ + G++  +D V ++ +  SG I K  V+ G+ + QG  +   +  +  + +D+ 
Sbjct: 42  ISQTIEAVGKVYAKDQV-DVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDIT 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +++ + +++++K AL+  + +Y   +K + ++   L +   + ++  +      ++ 
Sbjct: 101 KAQLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYT--LKANVAE 158

Query: 160 VYRSLKMKLTRMRSIY 175
           +   +      +++  
Sbjct: 159 LNAQVVQLEITLKNAQ 174



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 6/167 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q +  +      K  LE+    ++++  L        E      N    +  ++ +   
Sbjct: 102 AQLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELNA 161

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHSKLTY 329
                   L   +K     TI +P+ G ++             +Q    IV   +     
Sbjct: 162 QVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVD-EGQTVNANQNTPTIVRIANLDEME 220

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           +R ++    +  +K G    + F    D  +K + A I  IDP  ++
Sbjct: 221 VRMEIAEADVSKIKVG--TELDFSLLND-PQKTYHAKIASIDPADTE 264


>gi|254694042|ref|ZP_05155870.1| Gram-negative bacterial RTX secretion protein D [Brucella abortus
           bv. 3 str. Tulya]
 gi|261214336|ref|ZP_05928617.1| secretion protein HlyD family protein [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915943|gb|EEX82804.1| secretion protein HlyD family protein [Brucella abortus bv. 3 str.
           Tulya]
          Length = 355

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 152


>gi|225166235|ref|ZP_03727940.1| RND family efflux transporter MFP subunit [Opitutaceae bacterium
           TAV2]
 gi|224799523|gb|EEG18047.1| RND family efflux transporter MFP subunit [Opitutaceae bacterium
           TAV2]
          Length = 373

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 78/195 (40%), Gaps = 17/195 (8%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           I+     VEI+S   G+I++    +G  +  G PL+T +       + L +  +K     
Sbjct: 61  IVRSLRTVEIQSQVDGVIEEVHFRDGDTVKAGAPLVTLDRRPFVAGLALAEAELKQ--AQ 118

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLL----------DFLGKYHSTCSKVFNYGISS 159
           +  E++  +F   K  ++E    S+E  L              GK  +  S   N G ++
Sbjct: 119 VAAERAKSEFDRYK-KLIEGGLVSQETFLQYSAADASSQAAVAGKEAAVASARLNLGYAT 177

Query: 160 VYRSLKMKLTR--MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE--KNAVSQND 215
           +      + +R  +R   L + +   +  L    ++    + ++ +N+    + A++  +
Sbjct: 178 IKAPFAGRTSRLALREGSLVKANDATRLLLTINQIAPIAVEFSVTENILASVRAALAAGE 237

Query: 216 LNQQERIVYKSTLEL 230
           +    R+   S  E+
Sbjct: 238 IRVVGRLQDGSGREV 252


>gi|108763235|ref|YP_631200.1| adventurous gliding motility protein AglZ [Myxococcus xanthus DK
           1622]
 gi|122981103|sp|Q1D823|AGLZ_MYXXD RecName: Full=Adventurous-gliding motility protein Z
 gi|108467115|gb|ABF92300.1| adventurous gliding motility protein AglZ [Myxococcus xanthus DK
           1622]
          Length = 1395

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 75/206 (36%), Gaps = 5/206 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                 D  +  +      ++ + +      ++  + + A E+   Q ++       T  
Sbjct: 448 RLNAERDALEAKLSQQVADLEADLARTMGERDQLRLDKDAQEAELTQRIEERDAKLGTLE 507

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKNLFEKN 209
           +  +  I+    +       ++       +LE +   ++  L   + +LT  ++ L +  
Sbjct: 508 RELSETIARNEHTEAELNANIQQQLERIGELEGEVEAVKTHLEDRENELTAELQALGQAK 567

Query: 210 AVSQNDLNQQERIVYKS----TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
              + DLN + + + ++      +L   + E ++    +            + L+E  R 
Sbjct: 568 DELETDLNDRLQALSQAKDALEADLSRQLEELRSAKAELEADLTGQIQALTSQLEETQRQ 627

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT 291
           L+ +QRT     +++  LE T  Q+ 
Sbjct: 628 LDDSQRTGEQLSARVAQLEDTVSQRE 653



 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 67/198 (33%), Gaps = 5/198 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +  ++  + +   L   +  +  AL     +        +   EQL   + +   T S+ 
Sbjct: 593 SRQLEELRSAKAELEADLTGQIQALTSQLEETQRQLDDSQRTGEQLSARVAQLEDTVSQR 652

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               I S+   +  +  R+  +  +        +  +  L+  ++ L   +N       +
Sbjct: 653 -ESTIESLQGDVAARDQRISELSGDLEATSQTLAQTQQTLAQTEQQLADTQNTLAS---T 708

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L +    +  ++  L++           + E   E +   +  L +  + L Q ++ 
Sbjct: 709 EGALAETRGELDATSQTLQQTQQTLAQTEGALAETRGELDAT-SQTLAQTQQTLAQTEQQ 767

Query: 273 FADEMSKLTILEKTREQK 290
            AD  + L   E T  + 
Sbjct: 768 LADTQNTLASTEGTLAET 785



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 67/205 (32%), Gaps = 5/205 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +T   ++  + +++     +       D    +   L  A ++ E++L   +G   S  S
Sbjct: 798  QTHAALEDTRGALQETSDTLAHTTRERDQRIAELADLGAAKDALEQELTGQIGHLRSELS 857

Query: 151  KV---FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-LF 206
            +    +    ++  +        +  +   R  L ++       L      L   ++ L 
Sbjct: 858  ETQGNYEAERAAHEKLAAESSAHIGDLTSERDGLRSELEATSQTLEQTHGQLAATRDALA 917

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             +    Q               +L E     +++  H+     E     A  L +++  L
Sbjct: 918  REQHAHQESRKAAASTQTTLEGQLAEARAHGEDLGEHLTLTKHELGTRVAE-LTQLTATL 976

Query: 267  EQNQRTFADEMSKLTILEKTREQKT 291
             Q + T A    +L  L +  +++ 
Sbjct: 977  AQTENTRAHLEERLHTLTEESQRRE 1001


>gi|254255208|ref|ZP_04948524.1| Multidrug resistance efflux pump [Burkholderia dolosa AUO158]
 gi|124900945|gb|EAY71695.1| Multidrug resistance efflux pump [Burkholderia dolosa AUO158]
          Length = 438

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 84/278 (30%), Gaps = 34/278 (12%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + +   +L   + ++  +Y N        +  ++ L+  Q+DL     + +  AVS 
Sbjct: 116 RIALGNAEATLGQIVRQVSGLYANDAFYAATVAQKQSDLARAQQDLRRRIAVADTGAVS- 174

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
                             E+I   ++ +       D A  +         R       + 
Sbjct: 175 -----------------AEDIAHARDAVAAAQAALDAARRQAQANRALTGRTTIDRHPSV 217

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               S++        +  + +P+ G +   +S           PLM IVP     ++ A 
Sbjct: 218 LAAASRVRDAYLAYARNVLPAPVTGYVAK-RSVQVGQRVSPGAPLMAIVPLDG-VWVDAN 275

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ--------- 384
               Q+++++ G   T+    Y D    ++   +             L  Q         
Sbjct: 276 YKESQLRNMRIGQPVTLTADVYGDKV--RYHGRVVGFSAGTGGAFATLPAQNATGNWIKI 333

Query: 385 -EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +     +++       + + +  G   EV     + T
Sbjct: 334 VQRLPARIQLDRKELEAHPLRI--GLSMEVDVDTHDDT 369


>gi|109900099|ref|YP_663354.1| RND family efflux transporter MFP subunit [Pseudoalteromonas
           atlantica T6c]
 gi|109702380|gb|ABG42300.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           atlantica T6c]
          Length = 404

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/220 (11%), Positives = 85/220 (38%), Gaps = 9/220 (4%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G ++      E++    GI+++     G  + +G  L   E       ++  K ++ + 
Sbjct: 52  QGRVVASLTA-EVRPQVGGIMQERLFTEGEFVEEGDVLYQIEPATFQAAVNEAKANLNSA 110

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  + T K      + ++  L K     ++   D    Y    + +  +  +     + +
Sbjct: 111 KATVATAK----LKDQRFADLLKFEGVSQQDADDAHATYLEAKADIERFEAALETARINL 166

Query: 167 KLTRMRSIYLNRLDLENKS--SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + +++++    R+ + N +  SL+ A  ++    +  +  ++     S  ++ +  +++ 
Sbjct: 167 EFSKVKAPISGRIGISNVTPGSLVTASQTTALSTIRTLDPIYVDMIKSSTEILKLRQLLA 226

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           K   ++++   +   +L   +E   +  L+      + S 
Sbjct: 227 K--ADIKKGSTDVSLLLEDGSEYELKGQLKMQEVAVDAST 264


>gi|317063437|ref|ZP_07927922.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
 gi|313689113|gb|EFS25948.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
          Length = 370

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 79/215 (36%), Gaps = 17/215 (7%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            EK  +     ++ ER      LE       +      +    ++      N +KE++ +
Sbjct: 88  VEKGQI-LMTFDETERNNTMRKLERERLALAKLKRDIKVERELNKIGGSSDNAVKELNEE 146

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           + + +    + M  L+   +      I SP++GTI    +   +       PLM+I   S
Sbjct: 147 IRKIEINIEEYMEDLSKTAER-----IESPVSGTITSLTA-QENYLVDTDSPLMEIADLS 200

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
            +  +  +V    ++ ++ G    ++   +   ++K +  ++ KI  I   + +   ++ 
Sbjct: 201 DIKIV-LEVPEYDVKDIELGQKLMIKPEVFE--KKKSYLGVVTKISRIS--KVSETTSEN 255

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             EV +K  +         +  GF    +   +  
Sbjct: 256 VLEVEVKPDEAIPY-----IVPGFKVSAVIYLEQR 285



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 71/199 (35%), Gaps = 12/199 (6%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           + +  ++ G  + +G  L+TF++ E   T   ++ +++++  L+  I  E+  L+ +   
Sbjct: 77  VDEVFIQEGDYVEKGQILMTFDETERNNTMRKLERERLALAKLKRDIKVER-ELNKIGGS 135

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D   K       ++   + +Y    SK      S V  ++     +   +      L  
Sbjct: 136 SDNAVKELNEEIRKIEINIEEYMEDLSKTAERIESPVSGTITSLTAQENYLVDTDSPLME 195

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
            + L    +     +  +      +  + + ++ ++++       ++          +  
Sbjct: 196 IADLSDIKIVLEVPEYDVKDIELGQKLMIKPEVFEKKKSYLGVVTKISR--------ISK 247

Query: 244 INELYDEANLEFANYLKEI 262
           ++E   E  LE      E 
Sbjct: 248 VSETTSENVLEVEVKPDEA 266


>gi|297516726|ref|ZP_06935112.1| membrane fusion protein (MFP) component of efflux pump, signal
           anchor [Escherichia coli OP50]
          Length = 349

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|293603905|ref|ZP_06686320.1| multidrug efflux RND membrane fusion protein [Achromobacter
           piechaudii ATCC 43553]
 gi|292817742|gb|EFF76808.1| multidrug efflux RND membrane fusion protein [Achromobacter
           piechaudii ATCC 43553]
          Length = 400

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 69/227 (30%), Gaps = 21/227 (9%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 R +    + D  + + LF      +      +        EL     + +N   
Sbjct: 85  GSLEATRQVQVPAEVDGRVTQILFTAGQAVKAGQLLVQMNDAPERGELARLEAQVRNARA 144

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +         + A         LEQ Q       + +  ++   EQK I +P  G ++ 
Sbjct: 145 LLERTRRLVPQQAA-----TREQLEQAQADHDQAAADVRRVQALIEQKRIKAPFDG-VLG 198

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +      +A+   P++ +   +   Y    +  + +  V+     TV    +      +
Sbjct: 199 VRRVHLGQFARAGDPMVSLT-DASTLYANIILPEQALGAVRTDQPVTVTVDAHPGR---E 254

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           F   +  ++P +              V ++ T    ++ +  L  G 
Sbjct: 255 FTGRVTTVEPQVDAGSRT--------VRVQAT---LANPDGALAAGM 290



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 50/160 (31%), Gaps = 2/160 (1%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +  G +     V        G + +     G  +  G  L+   D      +   +  ++
Sbjct: 82  TGIGSLEATRQVQVPAEVD-GRVTQILFTAGQAVKAGQLLVQMNDAPERGELARLEAQVR 140

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           N R  ++  +  +       + LE+A    ++   D          K        V    
Sbjct: 141 NARALLERTRRLVPQQAATREQLEQAQADHDQAAADVRRVQALIEQKRIKAPFDGVLGVR 200

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           ++ L +        + L + +S L A +   ++ L  ++ 
Sbjct: 201 RVHLGQFARAGDPMVSLTD-ASTLYANIILPEQALGAVRT 239


>gi|260575424|ref|ZP_05843423.1| secretion protein HlyD family protein [Rhodobacter sp. SW2]
 gi|259022344|gb|EEW25641.1| secretion protein HlyD family protein [Rhodobacter sp. SW2]
          Length = 362

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 70/239 (29%), Gaps = 14/239 (5%)

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             L        M   +    A  Q     +++ +          +   ++  +   EL  
Sbjct: 122 EQLKLAYAQAQMQARVASDEASYQASELARQQSLSDRGAAATAALDTARHTAQKAEELRL 181

Query: 250 EANLEFANYLKEISRD---LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
            A    A  L  ++ D      +        +            T+ +P  G I    SF
Sbjct: 182 LAEQGVAAALVALNGDPDAAVDSLPQVMAAQAARDAASYDLALTTVKAPADGIISQAASF 241

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE------ 360
                      L  +V  S   ++ A     Q+  +K G  A V F  +  +R       
Sbjct: 242 KVGQRVAVGASLFALVETSDA-WVEANFKETQLGDIKVGQAAEVEFDLHPGVRLAATVQA 300

Query: 361 -KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                     + P  +   N ++  +   V L++ D A    ++ L +G  A V  T  
Sbjct: 301 IGAGTGSEFSVLPAQNATGNWVKVTQRVPVRLQLDDDA---ASLGLASGLSASVTVTTG 356


>gi|224825675|ref|ZP_03698779.1| secretion protein HlyD family protein [Lutiella nitroferrum 2002]
 gi|224601899|gb|EEG08078.1| secretion protein HlyD family protein [Lutiella nitroferrum 2002]
          Length = 324

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 93/308 (30%), Gaps = 32/308 (10%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL-- 176
           +L        +  ++     +       +        G+      ++    +++++    
Sbjct: 41  YLAAPAAGYLQTLDTARGSRVQPGSALFAIAPDPEQQGLQEAEARVQSAEQKLQNLQEPR 100

Query: 177 ---NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                  +E +     A L      L   + L  +  +SQ  L++      ++  +    
Sbjct: 101 RPPEIAAIEAQLQSAEAALRLTATQLRQQQALARQGFISQAKLDEVTAAHDQAVAQADAL 160

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + K+    +                E+     + +   A +  K        E+K + 
Sbjct: 161 RQQLKSAQITLGRPP------------EVRGARAELEAARAQQEQK----RWQVEKKAVR 204

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF- 352
           +P AG IV    +    +    QP+  ++P ++   +R  V    +  ++ G     R  
Sbjct: 205 APAAGEIVE-TYYRPGEWVPAGQPVASLLPDNRR-RLRFFVPESVVGTLRPGQAVEARCD 262

Query: 353 --PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
             P           A  E   P+I  + +        +++ ++           LR G P
Sbjct: 263 GCPAPIRATVAFIAAQAEYTPPVIYSRGSRE------KLVFRVEAYPAPQQAAALRPGLP 316

Query: 411 AEVLFTAK 418
            +V    +
Sbjct: 317 VDVSLVGR 324


>gi|197104652|ref|YP_002130029.1| secretion protein HlyD [Phenylobacterium zucineum HLK1]
 gi|196478072|gb|ACG77600.1| secretion protein HlyD [Phenylobacterium zucineum HLK1]
          Length = 341

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 59/209 (28%), Gaps = 21/209 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             +++   +V     E    I + +  L      YD                +++ +  +
Sbjct: 61  QQVSRGAVLVELRNTEQSAGIAQAEARLVQARRAYDRYRA-LGEKGFASKAAIDEYEAAW 119

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA- 332
               + L         + I +P AG +V     +         P   IV    L+ +R  
Sbjct: 120 RTAQADLAAARAREADRVIRAPFAG-VVGLSDVAPGALVNPGAP---IVTLDDLSAVRVD 175

Query: 333 -KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            +V  + +  +++G T       Y           I ++D  + ++              
Sbjct: 176 FQVPERYLAQLREGQTILAAVDAYPGET---ITGRISRLDTRVDERT-----------RA 221

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                 F +    L+ G    V  +    
Sbjct: 222 ITARAEFPNPGRRLKPGMLVRVGVSRGQR 250


>gi|13431711|sp|Q90339|MYSS_CYPCA RecName: Full=Myosin heavy chain, fast skeletal muscle
 gi|2351223|dbj|BAA22069.1| myosin heavy chain [Cyprinus carpio]
          Length = 1935

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 84/214 (39%), Gaps = 12/214 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLG 143
            +  E+ + ++ K  S++  +  +  E   L    +  N+    L+K   + ++ L ++  
Sbjct: 1400 DAEESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQ 1459

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY  + +++   G     RSL  +L +M++ Y   LD       L+    + Q++++ + 
Sbjct: 1460 KYEESQAEL--EGAQKEARSLSTELFKMKNSYEEALD---HLETLKRENKNLQQEISDLT 1514

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                +   S ++L + ++ V     E++  + E +  L H         LE      EI 
Sbjct: 1515 EQLGETGKSIHELEKAKKTVESEKSEIQTALEEAEGTLEHEESKILRVQLELNQVKSEID 1574

Query: 264  RDLEQNQRTFADEM---SKLTILEKTREQKTILS 294
            R L +             ++    ++     + S
Sbjct: 1575 RKLAEKDEEMEQIKRNSQRVIDSMQSTLDSEVRS 1608



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 83/241 (34%), Gaps = 22/241 (9%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREE--QL 138
            L  E  ++   +  +  +++ ++  ++ EKS     +D L +  + + KA  + E+  + 
Sbjct: 1193 LRKEQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLTSNMEAVAKAKANLEKMCRT 1252

Query: 139  LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            L+       T S      ++ +        T          + E   S L     ++ + 
Sbjct: 1253 LEDQLSEIKTKSDENVRQLNDMNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAYTQQ 1312

Query: 199  LTMMKNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +K   E+   ++N L               +Q     ++  EL+  + +  + +   
Sbjct: 1313 IEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRGMSKANSEVAQW 1372

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               Y+   ++    L+E  + L Q  +   + +  +     + E+      + G +    
Sbjct: 1373 RTKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVNSKCASLEKTKQR--LQGEVEDLM 1430

Query: 305  S 305
             
Sbjct: 1431 I 1431



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 75/225 (33%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKK--VSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++  E+ +      +KK    I  L   I+ E+S    L  K   L+   
Sbjct: 1057 EGDLKLAQESIMDLENEKQQSDEKIKKKDFEISQLLSKIEDEQSLGAQLQKKIKELQARI 1116

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1117 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1170

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   M ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1171 -----EFQKMRRDLEESTLQHEATAAALRKEQADSVAELGEQIDNLQRVKQKLEKEKSEY 1225

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +       + +   +LE+  RT  D++S++        ++
Sbjct: 1226 KMEIDDLTSNMEAVAKAKANLEKMCRTLEDQLSEIKTKSDENVRQ 1270


>gi|330902830|gb|EGH33832.1| secretion protein HlyD [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 153

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 45/146 (30%), Gaps = 14/146 (9%)

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           + +     +   I++P  G +          Y      LM +VP  +     A +   Q+
Sbjct: 1   IELARIDLDNTRIVAPRDGQLGQIGVR-LGAYVNSGAQLMALVPEQRWIV--ANMKETQM 57

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKITD 395
            +V+ G   +            +    +++I P    +      +  T  + ++  +I  
Sbjct: 58  ANVRLGQPVSFTVDALDGH---EMHGHVQRISPAAGSEFSLLPADNATGNFVKISQRIPV 114

Query: 396 LAFSDNNIE----LRNGFPAEVLFTA 417
               D +      LR G    V    
Sbjct: 115 RIVVDADQPMLEHLRPGMSVVVSIDT 140


>gi|297171335|gb|ADI22340.1| multidrug resistance efflux pump [uncultured actinobacterium
           HF0500_01C15]
          Length = 332

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 53  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 112

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 113 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 154

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 155 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 213

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +  G  A V F        K F   +  I P +
Sbjct: 214 IV-AQFRQNSLLRLAPGDDAEVVFNALP---GKVFSGKLAAISPAV 255



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 20  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 79

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 80  EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 139

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 140 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 169


>gi|312130467|ref|YP_003997807.1| efflux transporter, rnd family, mfp subunit [Leadbetterella
           byssophila DSM 17132]
 gi|311907013|gb|ADQ17454.1| efflux transporter, RND family, MFP subunit [Leadbetterella
           byssophila DSM 17132]
          Length = 373

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/137 (11%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G++  E           GI++K  ++ G  +  G P+    ++   + +   + +++  
Sbjct: 50  EGKVNVEIRPQV-----EGILEKIYIDEGDFVKAGQPIFLINELPYQEQVKNARANVEVE 104

Query: 107 RCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           R  +   + E   L  L +   + +   ++ +  L           ++     I+  + +
Sbjct: 105 RARLRNAEIELDRLQPLVDHEVISDVQLKTAQSHLEVAKASLARAQAQEATARINMGFTT 164

Query: 164 LKMKLTRMRSIYLNRLD 180
           +K  +         R+ 
Sbjct: 165 IKAPVNGYIGRIPKRIG 181


>gi|312882719|ref|ZP_07742456.1| membrane-fusion protein [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369680|gb|EFP97195.1| membrane-fusion protein [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 366

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 64/214 (29%), Gaps = 26/214 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            +     V    L   +    K+   L E     KN  R ++E                 
Sbjct: 83  PIEANQKVELGQLL-IKLDDEKAIASLAEAKAYLKNEKRKLSEFE-----RLLEKSAMTQ 136

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            +++  Q      +S+L + +       I +P  G +     FS        + L+ +  
Sbjct: 137 TEIDAQQANVDIAISRLDLAQANLNDLHIRAPFRGNV-GLIDFSRGKMVSAGESLLSL-- 193

Query: 324 HSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
              L    +  +V  + +  +  G     +   + D     F   +  +D  I     N 
Sbjct: 194 -DDLSIMQLDLQVPERYLAKLSLGAEVEAKSEAWPDEI---FYGKVVALDNQIDSNTLN- 248

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                  + ++     F +++++L+ G       
Sbjct: 249 -------IRVR---SRFLNDSLKLKPGMLVSARI 272



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 51/130 (39%), Gaps = 5/130 (3%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+   E  V +I S  +G +    +E   ++  G  L+  +D +    +   K  +KN +
Sbjct: 61  GKFEAEQAV-DISSQVNGKVVSVPIEANQKVELGQLLIKLDDEKAIASLAEAKAYLKNEK 119

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +    S  + L  K  + +   ++++  +   + +     + + +  I + +R     
Sbjct: 120 RKL----SEFERLLEKSAMTQTEIDAQQANVDIAISRLDLAQANLNDLHIRAPFRGNVGL 175

Query: 168 LTRMRSIYLN 177
           +   R   ++
Sbjct: 176 IDFSRGKMVS 185


>gi|294626516|ref|ZP_06705115.1| membrane fusion protein precursor [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292599206|gb|EFF43344.1| membrane fusion protein precursor [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 413

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/135 (10%), Positives = 44/135 (32%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +     G +     + G ++ +G  L   +        D    + 
Sbjct: 64  ASALGTVT-ALNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAK 122

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +      N+      V     +++  Q+  +     +  +++ +  +   
Sbjct: 123 RQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVAANDAQMRSAQVQLQ 182

Query: 161 YRSLKMKLTRMRSIY 175
           +  +   +  +  I 
Sbjct: 183 FTRVTAPIDGIAGIR 197



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 53/146 (36%), Gaps = 5/146 (3%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEI 262
            +K   ++Q D    +    ++    R+N         +     D A  ++ +   L   
Sbjct: 97  VKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQ 156

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + Q +   A   +++   +   +   + +PI G I   +     N    S  ++ + 
Sbjct: 157 RNQVAQYEAAVAANDAQMRSAQVQLQFTRVTAPIDG-IAGIRGVDVGNIVTSSSTIVTLT 215

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTA 348
              +  Y+   +  +++Q V+ G TA
Sbjct: 216 -QIRPIYVSFNLPERELQAVRTGQTA 240


>gi|170293846|gb|ACB12982.1| HlyD [Aquabacterium sp. PL1F5]
          Length = 556

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 59/183 (32%), Gaps = 37/183 (20%)

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L + +R   +      D++ ++    KT+ + T+++PI G +                 L
Sbjct: 224 LVDGARQRMRQVGMSEDQIKRVEQTGKTQPRITLVAPIGGVLSELMVR-EGMSVMPGATL 282

Query: 319 MKI--VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           ++I  V      +  A+V   Q+  ++ G     R P         F+  ++ + P +S 
Sbjct: 283 LRINGV---STVWANAEVPESQVAQLRPGTKVQARSPAVPGTT---FEGTVQALVPEVSP 336

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGF-----------------PAEVLFTAKN 419
               L      +  +++ +         L  G                  P E +     
Sbjct: 337 GTRTL------KARVQLNNPGM-----RLVPGMSVAMQFMDMRAEKALLIPTEAVIQTGK 385

Query: 420 TTL 422
            T+
Sbjct: 386 RTV 388



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT-DLIDLKKVSIKNLR 107
               + + +P  G++ +  V  G  ++ G  LL    + T     ++ +  +  LR
Sbjct: 251 TQPRITLVAPIGGVLSELMVREGMSVMPGATLLRINGVSTVWANAEVPESQVAQLR 306


>gi|300797856|ref|NP_001179297.1| desmoplakin [Bos taurus]
 gi|297489535|ref|XP_002697644.1| PREDICTED: desmoplakin [Bos taurus]
 gi|296473943|gb|DAA16058.1| desmoplakin [Bos taurus]
          Length = 2889

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 76/210 (36%), Gaps = 9/210 (4%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
             ET   + +++  +  LR  +D E+ + +      D+       +E QL     +     
Sbjct: 1532 TETISKLKVQEQEL--LRLRLDYERVSQERTVRDQDIARFQTSLKELQLQKQKAEEELAR 1589

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRL----DLENKSSLLRALLSSHQKDLTMMKNL 205
             K      SS  + L+ +L  MR     +      L  +      +    + +L   ++ 
Sbjct: 1590 LKRAASEDSSKRKKLEEELEGMRRTLKEQAIKVTSLTQQLEQASIVKKRSEDELRQQRDT 1649

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLKEI 262
             + +   +     + R +      LR  + +++  +R     NE + +A  + +  L E 
Sbjct: 1650 LDGHLREKQRTQDELRRLASEVEALRRQLLQEQESVRQAQTRNEHFQKAIEDKSRSLNES 1709

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              ++E+ Q        +  +LE+   Q  +
Sbjct: 1710 KIEIERLQSLTESLTKEHLMLEEELRQLRL 1739



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 70/202 (34%), Gaps = 15/202 (7%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             T D +      ++ LR  +  E+ ++     + +  +KA E +   L +   +      
Sbjct: 1659 RTQDELRRLASEVEALRRQLLQEQESVRQAQTRNEHFQKAIEDKSRSLNESKIEI----- 1713

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +       S+ +   M    +R + L   DL+      R    +       +  L  +  
Sbjct: 1714 ERLQSLTESLTKEHLMLEEELRQLRLEYDDLQ------RGRSEADHDKNATIAELRNQLQ 1767

Query: 211  VSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            +S N   + + ++     E   LR+ I   +      +    E+  +    ++E    L 
Sbjct: 1768 ISNNRTLELQGLINDLQRERENLRQEIERFQKQALEASNRIQESKNQCTQVVQERESLLV 1827

Query: 268  QNQRTFADEMSKLTILEKTREQ 289
            + +     + ++L  LE+   +
Sbjct: 1828 KIKV-LEQDKARLQRLEEELSR 1848



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/218 (11%), Positives = 76/218 (34%), Gaps = 18/218 (8%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               +  + + + +L   ++          ++        +    +      +     S+V
Sbjct: 1612 RRTLKEQAIKVTSLTQQLEQASIVKKRSEDELRQQRDTLDGHLREKQRTQDELRRLASEV 1671

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                   +     ++  + R+ +  +  +E+KS  L       ++  ++ ++L +++ + 
Sbjct: 1672 EALRRQLLQEQESVRQAQTRNEHFQKA-IEDKSRSLNESKIEIERLQSLTESLTKEHLML 1730

Query: 213  QNDLNQQ-------ERIVYKSTLELRENIHEQKNMLR-------HINELYDEANLEFANY 258
            + +L Q        +R   ++  +    I E +N L+        +  L ++   E  N 
Sbjct: 1731 EEELRQLRLEYDDLQRGRSEADHDKNATIAELRNQLQISNNRTLELQGLINDLQRERENL 1790

Query: 259  LKEISR---DLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +EI R      +      +  ++ T + + RE   + 
Sbjct: 1791 RQEIERFQKQALEASNRIQESKNQCTQVVQERESLLVK 1828



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 66/212 (31%), Gaps = 9/212 (4%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            +         L   K+      R  IDT       L+ +   L+       E L     +
Sbjct: 1380 INITKTTIHQLTLQKEEDTSGYRAQIDTLTRENRSLSEEVKRLKNTLAQNTETL--RRVE 1437

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMMK 203
             +    K     +S   + L+++L ++  +        +         +    K++  +K
Sbjct: 1438 ENVQQQKATGLEMSQRKQQLEVELRQVTQMRTEESARYKQSLDDAAKTIQDKNKEIDRLK 1497

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E  A  +  L  +   + ++  EL++        +  +     E      +Y +   
Sbjct: 1498 QLIETEASQRKCLEDENARLQRAQGELQKAHSSATETISKLKVQEQELLRLRLDYERVSQ 1557

Query: 264  ------RDLEQNQRTFADEMSKLTILEKTREQ 289
                  +D+ + Q +  +   +    E+   +
Sbjct: 1558 ERTVRDQDIARFQTSLKELQLQKQKAEEELAR 1589



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 79/240 (32%), Gaps = 26/240 (10%)

Query: 55   NVVEIKSPFSGIIK----------KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
                I+SP   I++          +    +G            E +++ + + LK   I+
Sbjct: 991  KRTVIQSPSGVILQEAADMHARYIELLTRSGDYYR-----FLSEMLKSLEDLKLKNTKIE 1045

Query: 105  NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             L   +   + A     NK   L++  +  + +   F  K  S         +       
Sbjct: 1046 VLEEELRLARDANSENCNKNKFLDQNLQKYQAECSQFKAKLVSLEELKRQAELDG----- 1100

Query: 165  KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
            K     +   Y    +L  K + L   +   ++    +++ F++    ++D +Q ++   
Sbjct: 1101 KSAKQNLDKCYGQIKELNEKITRLTYEIEDEKRRRKAVEDRFDQQ---KSDYDQLQKARQ 1157

Query: 225  KSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISRDLEQNQRTFADEMSKLT 281
                 L     E +  ++      +       E     +E   +L + +  + +EMS L 
Sbjct: 1158 NEKESLGWQKMESEKAIKEKEFEIERLRVLLQEEGARKREYENELAKVRNHYNEEMSNLR 1217


>gi|254240867|ref|ZP_04934189.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|126194245|gb|EAZ58308.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 334

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 91/263 (34%), Gaps = 34/263 (12%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI--HEQKNML 241
           +   L   +   + +L +++     N V++  L +    +  S  +LR+     ++++ L
Sbjct: 69  EKGALLLSIDPARYELAVLRAERAVN-VARAALGESRAAIEASQAQLRQRRSEAQRRSAL 127

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTF-------ADEMSKLTILEKTREQKTILS 294
           +  + L  E N +    +     +L +NQ +            + L       E+  + +
Sbjct: 128 QKRSMLSVEENEKAQTDVSLAQAELLRNQASLGLAQANVELAEAALQQARLDLERTQVRA 187

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P++G +   Q+    +YA    PL+ +V      Y+       ++  +  G  A V    
Sbjct: 188 PVSGYVTNLQTR-EGDYAHAGVPLLALV-DRDSFYVSGYFEETKLPGIHVGSRARVELMS 245

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQT------QEYYE---------VILKITDLAFS 399
                 ++F   ++ I   I+ ++N   +         Y          V + I      
Sbjct: 246 -----GERFDGRVQSIAHAITDRENAEGSRLLANINPSYTWVKLAQRIPVRIAIDPAYRQ 300

Query: 400 DNNIELRNGFPAEVLFTAKNTTL 422
            N   LR G  A +       T 
Sbjct: 301 RN--TLRAGVTATIRVLPAEDTA 321



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 50/145 (34%), Gaps = 2/145 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV + +  SG+I +  + +   + +G  LL+ +       +   + ++   R  + 
Sbjct: 42  VRADVVTLSADVSGLITRLPLSDNQPVEKGALLLSIDPARYELAVLRAERAVNVARAALG 101

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++A++   ++  + ++  E++    L          ++     +S     L      +
Sbjct: 102 ESRAAIE--ASQAQLRQRRSEAQRRSALQKRSMLSVEENEKAQTDVSLAQAELLRNQASL 159

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQ 196
                N    E      R  L   Q
Sbjct: 160 GLAQANVELAEAALQQARLDLERTQ 184


>gi|311747280|ref|ZP_07721065.1| efflux transporter, RND family, MFP subunit [Algoriphagus sp. PR1]
 gi|311302633|gb|EAZ83157.2| efflux transporter, RND family, MFP subunit [Algoriphagus sp. PR1]
          Length = 367

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/175 (10%), Positives = 66/175 (37%), Gaps = 11/175 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL---- 120
           G +++  V+ G ++ +G  L      E  ++++  K  +   R      +  ++ L    
Sbjct: 56  GFVEEIYVDEGEEVKKGQALFKLNSSELGEIVNSSKALLMQERAQAQAARLEVERLQILV 115

Query: 121 ------NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
                 +++ ++ +   E  E  +L       +  + +    I + +  +  ++      
Sbjct: 116 DKKIITDSELELAKAKLEMAESGILQAESMVKNAETGLSYSVIRAPFDGIVDRIPFKTGS 175

Query: 175 YLNRLDLENKSSLLRALLSSHQ-KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            ++   L    + +  + + ++  +   ++ + EK    + +L ++E  +  S  
Sbjct: 176 LVSPGSLMTHITDISEIFAYYKVNENEYLRYMREKQENGEEELLEKEISLVLSDG 230



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 40/133 (30%), Gaps = 15/133 (11%)

Query: 197 KDLTMMKNLFEKNAVSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +    ++   E+  V + + + + + +   ++ EL E ++  K +L         A LE 
Sbjct: 49  EVRAKVEGFVEEIYVDEGEEVKKGQALFKLNSSELGEIVNSSKALLMQERAQAQAARLEV 108

Query: 256 AN-------------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                           L+     LE  +       S +   E       I +P  G +  
Sbjct: 109 ERLQILVDKKIITDSELELAKAKLEMAESGILQAESMVKNAETGLSYSVIRAPFDGIVDR 168

Query: 303 NQSFSSSNYAQQS 315
               +  +     
Sbjct: 169 IPFKT-GSLVSPG 180


>gi|292900449|ref|YP_003539818.1| multidrug resistance protein [Erwinia amylovora ATCC 49946]
 gi|291200297|emb|CBJ47425.1| multidrug resistance protein [Erwinia amylovora ATCC 49946]
          Length = 409

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 60/165 (36%), Gaps = 4/165 (2%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  + + +++ G ++    V  + S  SG +     + G ++  G  L   +       +
Sbjct: 72  LADVPVYLTALGTVIPNATV-TVTSQVSGTLTHVYFKEGEKVAAGQLLAQIDPRSYQATL 130

Query: 97  DLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              + ++   +  + + +  L     L  +  +  +  E++   +  +LG   +  +++ 
Sbjct: 131 AQYQGNLSQNQALLKSAQLTLARYQKLYARDLLARQDLETQTATVGQYLGAVTADQAQIA 190

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              ++  +  +   ++    + L       +SS    ++   Q  
Sbjct: 191 AAKLNIEFARITAPISGRVGLRLVDAGNRIQSSDTTGIVVITQTQ 235



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 55/170 (32%), Gaps = 24/170 (14%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ-------------RTFADEM 277
           +  + + +  L     L   A L  A Y K  +RDL   Q                  + 
Sbjct: 127 QATLAQYQGNLSQNQALLKSAQLTLARYQKLYARDLLARQDLETQTATVGQYLGAVTADQ 186

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVT 335
           +++   +   E   I +PI+G +   +   + N  Q S    ++ I   ++   +   V 
Sbjct: 187 AQIAAAKLNIEFARITAPISGRV-GLRLVDAGNRIQSSDTTGIVVIT-QTQPAAVTFSVP 244

Query: 336 ----PKQIQHVKKGYTATVRFPHYADI-REKKFKAIIEKIDPIISQQDNN 380
               P  ++ +  G    +    +      +  +  ++ I   I     +
Sbjct: 245 QSNIPTLLKALHNGQP--LPATAFDQAGSTQLAQGEVQFISNQIDTSTGS 292


>gi|284920732|emb|CBG33795.1| macrolide-specific efflux protein [Escherichia coli 042]
          Length = 371

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 53/140 (37%), Gaps = 3/140 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I 
Sbjct: 44  GELQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIK 102

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++  LR      ++ L      Y   ++  +++     D      +T   V    I
Sbjct: 103 EVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDL--DTAATEMAVKQAQI 160

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
            ++   +K     + +   N
Sbjct: 161 GTIDAQIKRNQASLDTAKTN 180


>gi|284037242|ref|YP_003387172.1| efflux transporter RND family, MFP subunit [Spirosoma linguale DSM
           74]
 gi|283816535|gb|ADB38373.1| efflux transporter, RND family, MFP subunit [Spirosoma linguale DSM
           74]
          Length = 419

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/341 (12%), Positives = 102/341 (29%), Gaps = 33/341 (9%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEK--SALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                L  +   +   L+  ++  +  +A   +    + L    E        +     +
Sbjct: 23  TVVAALALVIAWTRNALKTSVEANRIRTATAEIGPVENSLNATGEVIPAYEQIYTSPIRA 82

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           +  +V     ++V     +         +    L ++ +L R  +   Q  + + K+L++
Sbjct: 83  SIRRVLITPGTAVKPGQPILDLDKSLTEIELEKLNDQLALKRNGID--QLRMKLNKSLYD 140

Query: 208 KNAVSQNDLNQQERIVYKSTLELR---------ENIHEQKNMLRHINELYDEANLEFANY 258
                Q  L    R+        R         E++   +N LR       +   + +  
Sbjct: 141 AEVNDQIKLLNINRLRADLEGARRLQKVGGSTGEDVTRAENALRVAELEKKQLENDLSYN 200

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
            + +S  L +       E   L  L    +Q  I++  +G + +       +   + + L
Sbjct: 201 RQSMSASLRETTLQAQIEEKNLKELTHKLKQADIIADRSGVLTWVNEN-IGSSVNEGEML 259

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            K+        +    +      VK G   T++        E   + +I ++ P +    
Sbjct: 260 AKLA-DLASFRVEGSCSDVYADQVKVGLPVTIKV------NETSLRGLITQVKPAV---- 308

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   + + L  +  A       LR     EV      
Sbjct: 309 --KNGIVQFVIQLDNSHHA------SLRPNMKVEVFVITDR 341


>gi|114776411|ref|ZP_01451456.1| putative cation-efflux system signal peptide protein [Mariprofundus
           ferrooxydans PV-1]
 gi|114553241|gb|EAU55639.1| putative cation-efflux system signal peptide protein [Mariprofundus
           ferrooxydans PV-1]
          Length = 359

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 73/223 (32%), Gaps = 28/223 (12%)

Query: 205 LFEKN-AVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           L +   AVS+  L         +  V K+  EL+    +Q+     +N   D     F +
Sbjct: 75  LVDAGVAVSKGQLLAVLDDADAKSAVAKAEAELKRLQAQQQAQRSLVNRYQDMIEKNFIS 134

Query: 258 --YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              L++    L+  Q+      + L       ++  I+SP+AG +   +  ++ +Y    
Sbjct: 135 KTVLEQAQAQLDVLQQGEQAAEAGLNQARNNLQRTRIISPVAGRVEQ-RLIAAGDYIGLG 193

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           +P+  I    K   +   +   +  H++KG    +                 + I   I+
Sbjct: 194 KPMFSIA-AGKRLIVSIPLPETRAAHIEKGQMVRLH-----------LAGATKPITAPIT 241

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                +     +E  ++I +          R G          
Sbjct: 242 DLTPMVGRSNAFEARVEIDNPG------HWRPGASVTAEIITD 278



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 41/102 (40%), Gaps = 2/102 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN-- 122
           G ++   V+ G  + +G  L   +D +    +   +  +K L+     ++S ++   +  
Sbjct: 69  GRVESVLVDAGVAVSKGQLLAVLDDADAKSAVAKAEAELKRLQAQQQAQRSLVNRYQDMI 128

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           + + + K    + +  LD L +         N   +++ R+ 
Sbjct: 129 EKNFISKTVLEQAQAQLDVLQQGEQAAEAGLNQARNNLQRTR 170


>gi|153947901|ref|YP_001402540.1| RND family efflux transporter MFP subunit [Yersinia
           pseudotuberculosis IP 31758]
 gi|152959396|gb|ABS46857.1| efflux transporter, RND family, MFP subunit [Yersinia
           pseudotuberculosis IP 31758]
          Length = 386

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 87/263 (33%), Gaps = 15/263 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GIIKK     GS++  G  L   +        D  K +++N++  + + K        +Y
Sbjct: 66  GIIKKRLFTEGSEVTAGQVLYQIDPASYQAAYDTAKAALQNVQVSVKSAK----LKAQRY 121

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L K     ++   D    Y    + V     +     + +  T++R+    R+ + + 
Sbjct: 122 AALAKENGVSQQDADDAQTSYQQALANVAEKTAALETARINLAYTQVRAPISGRIGISSV 181

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +    AL++++Q          +   V     + Q   + K      + +      L   
Sbjct: 182 TPG--ALVTANQTTALATIRNLDPIYVDLTQSSAQLLALRKQQQAGNDTVANAPVQLTLE 239

Query: 245 NELY--DEANLEFANYLKEISRDLEQNQRTFADEMSKL-------TILEKTREQKTILSP 295
           +      E +L+      + +      +  F +   +L         +        IL+P
Sbjct: 240 DGSVYAHEGSLQLTEVAVDEATGAVTLRAKFPNPEHQLLPGMFVRASVRNGVNNTAILAP 299

Query: 296 IAGTIVYNQSFSSSNYAQQSQPL 318
             G     +  +++    Q Q +
Sbjct: 300 QQGITHDAKGNATALVVNQQQQV 322


>gi|256257802|ref|ZP_05463338.1| Gram-negative bacterial RTX secretion protein D [Brucella abortus
           bv. 9 str. C68]
 gi|297248637|ref|ZP_06932355.1| HlyD family secretion protein [Brucella abortus bv. 5 str. B3196]
 gi|297175806|gb|EFH35153.1| HlyD family secretion protein [Brucella abortus bv. 5 str. B3196]
          Length = 355

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 152


>gi|254719389|ref|ZP_05181200.1| HlyD family secretion protein [Brucella sp. 83/13]
 gi|265984392|ref|ZP_06097127.1| secretion protein HlyD family protein [Brucella sp. 83/13]
 gi|306839166|ref|ZP_07471983.1| HlyD family secretion protein [Brucella sp. NF 2653]
 gi|264662984|gb|EEZ33245.1| secretion protein HlyD family protein [Brucella sp. 83/13]
 gi|306405713|gb|EFM61975.1| HlyD family secretion protein [Brucella sp. NF 2653]
          Length = 355

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 152


>gi|189194559|ref|XP_001933618.1| anucleate primary sterigmata protein B [Pyrenophora tritici-repentis
            Pt-1C-BFP]
 gi|187979182|gb|EDU45808.1| anucleate primary sterigmata protein B [Pyrenophora tritici-repentis
            Pt-1C-BFP]
          Length = 1568

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 80/207 (38%), Gaps = 9/207 (4%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV- 152
            D+++  +  +K L   I+ +   L  L N+ D   +  + +E++  +   +   T  ++ 
Sbjct: 876  DMLETTENKVKELEREIEAQTEDLQALANERDEALELLQDKEQECEELRQEALDTVQRLE 935

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
               +   +   R            +  + +++N S  L  L       L  ++NL  + +
Sbjct: 936  VDLDQKQTERDRLYNDLENTTEDFHALQQEMKNVSESLLQLEDDRDASLRKIQNLEAELS 995

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN------LEFANYLKEISR 264
             +  +LN+Q++++ +   +      + ++    I+ L +E         E  + L     
Sbjct: 996  DANEELNRQDKLLSEERSKNERLDVQLESCQGEIDFLREEQEGDKIKIGELESALNHTQA 1055

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
             L++ +    D   ++T   + R+   
Sbjct: 1056 TLQEARERARDLEERMTEERQQRDALE 1082



 Score = 43.5 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 79/230 (34%), Gaps = 12/230 (5%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY-DVLEKAF 131
            + G +I  G         + T  +   +   ++L   +  E+   D L  +    +EK  
Sbjct: 1036 QEGDKIKIGELESALNHTQAT--LQEARERARDLEERMTEERQQRDALETQEKQEVEKII 1093

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSV--YRSLKMKLTRMRSIYLN----RLDLENKS 185
                 QL     +       + +  + +    +        +R    N    R  L    
Sbjct: 1094 TELNAQLSKLKEESRKLRKNLSSKEVEASTWKQRHDEFELALRETLGNPNGTRASLFKDI 1153

Query: 186  SLLRALLSSHQKDLTMMK-NLFEKNAVSQND--LNQQERIVYKSTLELRENIHEQKNMLR 242
            + L+  L    +DL  ++ +L EK+ + +N   L +   +  +   E+ E   + +    
Sbjct: 1154 AKLQRDLQGAMQDLDTVRADLTEKDRLLRNRDTLLENTGMESRRLSEMLERERQARRQDL 1213

Query: 243  HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               E     +      +++    + + +   + +  ++  LEK  +++ +
Sbjct: 1214 SAWENAKRGHQSTVRAIQQAESRVLELETLRSQDRQRIHHLEKNYKEQLL 1263



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/196 (10%), Positives = 66/196 (33%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +  + ++ +   +   R   +     L+    + D L +  E  + ++ +     + T +
Sbjct: 996  DANEELNRQDKLLSEERSKNERLDVQLESCQGEIDFLREEQEGDKIKIGELESALNHTQA 1055

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             +      +     +M   R +   L   + +    ++  L +   K     + L +  +
Sbjct: 1056 TLQEARERARDLEERMTEERQQRDALETQEKQEVEKIITELNAQLSKLKEESRKLRKNLS 1115

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              + + +  ++   +  L LRE +         + +   +   +    ++++        
Sbjct: 1116 SKEVEASTWKQRHDEFELALRETLGNPNGTRASLFKDIAKLQRDLQGAMQDLDTVRADLT 1175

Query: 271  RTFADEMSKLTILEKT 286
                   ++ T+LE T
Sbjct: 1176 EKDRLLRNRDTLLENT 1191


>gi|167753727|ref|ZP_02425854.1| hypothetical protein ALIPUT_02008 [Alistipes putredinis DSM 17216]
 gi|167658352|gb|EDS02482.1| hypothetical protein ALIPUT_02008 [Alistipes putredinis DSM 17216]
          Length = 329

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 50/407 (12%), Positives = 116/407 (28%), Gaps = 87/407 (21%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVS--SSGEILNEDNVVEIKSPFSGI 66
           +K++   ++  +    ++G+I  I+W     +  +      G +          S   G 
Sbjct: 1   MKKSTIVTIILIAAAVVLGVI-FISW----YLRKATPLYIQGTVECTTYKAS--SKVPGR 53

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I++ +VE G  + +G  L T    E    +              +  KSA   ++     
Sbjct: 54  IEEMKVEEGQHVTKGELLYTLSTPELNAKLQ-----------QAEAVKSAASAMD----- 97

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                              ++L     + +   LN  +      
Sbjct: 98  ----------------------------------QKALTGARIQQKEAALNLWEKA---- 119

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             +A L   QK    + NL+E+  V    L++    +       R    + + +    ++
Sbjct: 120 --QAGLLLAQKTFDRVNNLYEQGVVPAQKLDEARANLQAMQATERAAKAQCELVFDGASK 177

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              EA           +  + Q +   ++  S L+          + +P+ G +      
Sbjct: 178 EEKEA----------AAAQVRQAEGAVSEVESYLSDA-------LVYAPVTGEVSTI-IA 219

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
            +        P++ I+      ++   +    +  +  G   T   P      E +   I
Sbjct: 220 EAGELVGTGYPVVAIL-DMSDVWVTFNIKEDLMPDIHIGTRMTGYIPALDRSVEFEVTYI 278

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             + D               +++         + +   +R G    V
Sbjct: 279 AVQADFATWSATRTQGG---FDIRTFAVKAKPTQDVEYIRPGMSVLV 322


>gi|254224893|ref|ZP_04918508.1| HlyD family secretion protein [Vibrio cholerae V51]
 gi|125622581|gb|EAZ50900.1| HlyD family secretion protein [Vibrio cholerae V51]
          Length = 364

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 55/167 (32%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L T +  +    ++  ++ +KN        K+  +     
Sbjct: 77  SGRLTDIAVKEGDQVKKGQLLATLDSRDAKTALEAAQLELKNTEQEYSRAKAIFEKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       G+ S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEEAKRKLEYTQIIAPFDGVISEKTVENFAQVQANQVIMILQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +    +          +   + + E +A+     + Q R     
Sbjct: 197 DLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLQLRTYSTQ 243



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 72/223 (32%), Gaps = 26/223 (11%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + +    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 90  QVKKGQLLATLDSRDAKTALEAAQLELKNTEQEYSRAKAIFEKTQAISKAELDKVTNRYD 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I++P  G I      + +   Q +Q +M I+       +  ++
Sbjct: 150 LAKNRVEEAKRKLEYTQIIAPFDGVISEKTVENFAQV-QANQVIM-ILQDLNDLEVAIEI 207

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-----YEV 389
                          V          +    +    +     Q     TQ       Y V
Sbjct: 208 ------------PHRVMLS--GVRNTRAIAELSAIPNQQFDLQLRTYSTQPSSDSQTYSV 253

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH-PIT 431
           +L   DL        +  G  A+VL  A N T    +I  P+T
Sbjct: 254 VLGFEDL----KGFRVMPGMSAKVLPVADNPTAENTLITLPLT 292


>gi|124005830|ref|ZP_01690668.1| ABC transporter permease [Microscilla marina ATCC 23134]
 gi|123988513|gb|EAY28154.1| ABC transporter permease [Microscilla marina ATCC 23134]
          Length = 417

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 66/173 (38%), Gaps = 11/173 (6%)

Query: 50  ILNEDNVVEIKS-----PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI- 103
           I+ +     IK+        G ++K  VE+G Q+ +G  +L F +         ++  + 
Sbjct: 62  IVVDGVAQPIKTVFLDIIEGGRVEKIFVEDGYQVKKGDSILKFTNTALQIDFMNRESQLL 121

Query: 104 ----KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD-FLGKYHSTCSKVFNYGIS 158
               +     I+  ++ L  LN   D+  +  +++     D  L K  +   +V+     
Sbjct: 122 DMINERQTTQINMRQNELQTLNELADIEYRLKQAKRNHRRDSQLIKGKAIAKQVYFTSKD 181

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +     +      RSI  N +    + + L A +   Q+++ + +   +   V
Sbjct: 182 NYDYQQRKFELAKRSIKQNTMLRAERLNQLDASIQRMQRNIGLSQRTLDNLYV 234


>gi|54296466|ref|YP_122835.1| hypothetical protein lpp0497 [Legionella pneumophila str. Paris]
 gi|53750251|emb|CAH11645.1| hypothetical protein lpp0497 [Legionella pneumophila str. Paris]
          Length = 345

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 72/205 (35%), Gaps = 6/205 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
              +  TL ++I  IG +T +I+      +  +      +NV  + +  SG I    V+N
Sbjct: 19  KPKRWFTLTNVIIFIGFLT-AIIYVFSYLIPFTDNAFVVNNVRPVAALTSGYITDLYVKN 77

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  + +G  L T         ++     +   +  +   K+  +      +  +K ++  
Sbjct: 78  GDAVRKGQKLFTVFKKPYEYTVEQLSADLAGAQAKLAVLKATYERDLKLSENEQKIYKKL 137

Query: 135 EEQLLDFLGKYHSTCSKVF-----NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            +    +L  Y      +           +     +  L ++          EN+   ++
Sbjct: 138 AQDDQKYLKGYAIKSVSLITLQNSQQETKAAKDKWQASLKQLEIDQHQITVQENEIKSIQ 197

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQN 214
           A L + + +L +     + N V QN
Sbjct: 198 ARLKNAKVNLDLTDVYAQGNGVIQN 222



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 59/180 (32%), Gaps = 10/180 (5%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           +  +  +    + K ++L+A      K     + +++K A       +   I   S + L
Sbjct: 99  VEQLSADLAGAQAKLAVLKATYERDLKLSENEQKIYKKLAQDDQKYLKGYAIKSVSLITL 158

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           + +  E K           +  ++           +   +       ++L   +   +  
Sbjct: 159 QNSQQETKAAKDKWQASLKQLEID--------QHQITVQENEIKSIQARLKNAKVNLDLT 210

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            + +   G I     F+       +QPL  +V      YI+A      ++ V+KG    +
Sbjct: 211 DVYAQGNGVIQNL-FFTIGTPVNINQPLFSLV-DQDNIYIQANFNETDLRDVRKGSKVLI 268


>gi|260773777|ref|ZP_05882692.1| membrane-fusion protein [Vibrio metschnikovii CIP 69.14]
 gi|260610738|gb|EEX35942.1| membrane-fusion protein [Vibrio metschnikovii CIP 69.14]
          Length = 375

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 74/220 (33%), Gaps = 25/220 (11%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANYLKEISRDLEQNQR 271
           L +   ++ +S   L        N+ R + +     N    ++    LK    D+ Q ++
Sbjct: 95  LTEATTMLMQSEASLESAKQNVTNLERLVKQNIIPKNYGDYIQAQADLKSKLADVVQKRQ 154

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHS 325
                 S    +   +   T+ +PI GTI+  +              Q +  LM I    
Sbjct: 155 NLELIRSGEASIGDAKLTSTLTAPIDGTILNLKV-EVGEPIISTASSQAATELMSIA-DM 212

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           K    +  V+      +  G   TV    +        + ++ K+     + +N   +  
Sbjct: 213 KNMIFKGSVSEHDAAQLAVGMPVTVILAPFP---TLNIEGVLSKVAVQSEKLNNTSSSNN 269

Query: 386 ------YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 +    ++I+ L F   +I LR+GF A      + 
Sbjct: 270 TGFDNGF---EVEISQLNF-PEDITLRSGFSATAHIILEK 305



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 3/125 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + L  IE    + G+I+   + V IKS   GI+ +     G+ +  GTPL+      T  
Sbjct: 35  AQLGQIEKQAIAVGQIVPA-HSVSIKSQIEGIVGEIFHHVGAHVNAGTPLIKITPNPTPQ 93

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +      +      +++ K  +  L    K +++ K +    +   D   K      K 
Sbjct: 94  ALTEATTMLMQSEASLESAKQNVTNLERLVKQNIIPKNYGDYIQAQADLKSKLADVVQKR 153

Query: 153 FNYGI 157
            N  +
Sbjct: 154 QNLEL 158


>gi|170738523|ref|YP_001767178.1| secretion protein HlyD family protein [Methylobacterium sp. 4-46]
 gi|168192797|gb|ACA14744.1| secretion protein HlyD family protein [Methylobacterium sp. 4-46]
          Length = 411

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 74/222 (33%), Gaps = 36/222 (16%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIE-----------------ISVSSSGEILNEDNVVEI 59
           L+        G+ G   WS+    +                   VS++G I     VV I
Sbjct: 8   LRFGVPALAAGLFGFTAWSVSAKYDPRPITEPVIAAPANSYAQGVSAAGIIEPASEVVAI 67

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL------------- 106
            +  SG++ + +V  G+ +  G PL + +D E   ++   + ++                
Sbjct: 68  ATERSGVVSRVEVVAGAGVTAGRPLFSVDDREVRAVVARHEGALAAAEALLSSADLNIAM 127

Query: 107 ------RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 +   + E +  +    + D L  A  +R   +     +     +      +++ 
Sbjct: 128 QRHKISQAAAELENAQAESSRAELDRLRYASLARGSWVSRQRYEAAIADAGKAAAAVAAA 187

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             ++     + + +   RL+ E   +  +A L   + DL   
Sbjct: 188 EAAVAAAKQQSKVLTAKRLEAEANVAQSKAALEQARVDLDRT 229


>gi|289164324|ref|YP_003454462.1| HlyD family secretion protein [Legionella longbeachae NSW150]
 gi|288857497|emb|CBJ11329.1| putative HlyD family secretion protein [Legionella longbeachae
           NSW150]
          Length = 281

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 73/216 (33%), Gaps = 11/216 (5%)

Query: 202 MKNLFEKNAVSQNDLNQQE--RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           ++   ++  ++   + Q +  R    + L   +  +E+   L  I  +      +  +  
Sbjct: 67  VEPELKEEQIAHARVKQAQNARDAIIAKLAYAKVTYERNKKLIEIKAIQQSLLDQEKSKY 126

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
             +   L Q +   +     L   +   +Q   ++PI G +          Y   +Q ++
Sbjct: 127 DVLLAQLAQAEDDLSALSLNLKQAQWRLQQNNSVAPIDGMVFDIYYR-IGEYTHANQAVL 185

Query: 320 KIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            ++ P          V    +  ++ G         +    ++ +KA I+ I P +    
Sbjct: 186 SLLAPEDVKAIF--YVNGLDVSALQLGQQ----ISVFNAGHKESYKAQIDYISPSVEFTP 239

Query: 379 NNL-QTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             +   Q + ++  +I     + +   +  G P  +
Sbjct: 240 PVIYSDQTHEKLTYRIEAKFRTQDAFHVHPGQPVTI 275


>gi|242309290|ref|ZP_04808445.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239524331|gb|EEQ64197.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 356

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG+I +  V  G ++ QG  L    D   T  I  K   +K  +  +       +   N 
Sbjct: 59  SGVIDEIYVYEGDKVKQGQALAKLNDDLLTKEIKAKDSLLKQAKALLQKSTKDFERYKNL 118

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y     A++  E+ L D   +  +T S   +       +  K  +     + L RL  + 
Sbjct: 119 YQSDSIAYKEYEDALFDLQAQKGNTDSIAADLEYLKTQQKKKTLIAPYDGVILQRLLKQG 178

Query: 184 K 184
           +
Sbjct: 179 E 179


>gi|227543060|ref|ZP_03973109.1| efflux system protein [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227181282|gb|EEI62254.1| efflux system protein [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 647

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 66/226 (29%), Gaps = 6/226 (2%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC----HIDTEKSALDFLNN 122
           ++   V  G ++     L   +       +D ++             I   +  L     
Sbjct: 126 VQDLPVAVGDRVKANQLLARMDTSSLERELDSQRQQQSASSSESQNAIKQAQQQLAQQRE 185

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           K D       +     L           + F      V +     L + +          
Sbjct: 186 KLDRGLNQEINSANSALRDANLQLEGAKQDFANRAQQVEKDNDPALQQQKDAAEQARKAA 245

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQE-RIVYKSTLELRENIHEQKNM 240
             + L RA        +  +    E  A +++  L+Q + + + + T ELRE   ++   
Sbjct: 246 RDADLARAQAEFGLATVQRVNGAAEHQADLNRARLDQLKNQDLSRLTPELREAAEQEIAS 305

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           L++  +  + A  E    +      L Q +   +D     T  E  
Sbjct: 306 LQNTIDGENGARAERDQSIANAVTSLRQAENQASDAKDARTKAENR 351


>gi|197124614|ref|YP_002136565.1| efflux transporter RND family, MFP subunit [Anaeromyxobacter sp. K]
 gi|196174463|gb|ACG75436.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter sp.
           K]
          Length = 568

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 16/164 (9%)

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           + L E +R   Q       E+ KL    K  +  T  SPI+G +V               
Sbjct: 308 DALVEAARRKLQLWDVPPAEIRKLEETGKPTKTLTFYSPISGVVVKKDVV-EGMKLDAGA 366

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
              +IV      ++ A V  +++++VK G  AT+    + +     FK  +  IDP++  
Sbjct: 367 MPYEIV-DLSQVWVLADVYERELRNVKVGLPATLTLNAFPNH---PFKGKVSFIDPLLDP 422

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +           V +++   AF++   ELR     EV+   K  
Sbjct: 423 KTRT--------VKVRL---AFANPTGELRPEMFGEVVLQGKAR 455


>gi|163851820|ref|YP_001639863.1| secretion protein HlyD family protein [Methylobacterium extorquens
           PA1]
 gi|163663425|gb|ABY30792.1| secretion protein HlyD family protein [Methylobacterium extorquens
           PA1]
          Length = 289

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 89/245 (36%), Gaps = 20/245 (8%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +   +     L  ++S+ +NR     K+  + A L S  ++  +  +  +  + +  +  
Sbjct: 40  AQKLKIGSATLGILKSVPVNR-GAAVKAGDIIARLDSSVEEANVALSRAQAESTAGIEAQ 98

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q    +YK  LE +  + +       ++++  +  +   +   EI   L+          
Sbjct: 99  QTRVELYKRRLERQNQLSKGIVTQEKLDQVEADYEIGRRDLQTEI---LKHKLNGI---- 151

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
            +L   E   E + I SPI G +   +  S+  + +Q   +  +V      Y+ A +   
Sbjct: 152 -ELQRAEAQLELRMIRSPIRGIVTE-RLMSAGEFVRQDSAIFTLV-QLDPLYVEAYLPVS 208

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           + + +  G  ATV            ++A +  +D +             + V L++ +  
Sbjct: 209 RWKEIALGMPATVVL---DQPIGGAYEAKVSVVDQVFDAASGT------FGVRLELPNPD 259

Query: 398 FSDNN 402
           F    
Sbjct: 260 FKLPG 264



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 56/152 (36%), Gaps = 9/152 (5%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           ++     ++I S   GI+K   V  G+ +  G  +   +       + L +   ++    
Sbjct: 36  VVEPAQKLKIGSATLGILKSVPVNRGAAVKAGDIIARLDSSVEEANVALSRAQAEST--- 92

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                + ++    + ++ ++  E R+ QL   +           +Y I       ++   
Sbjct: 93  -----AGIEAQQTRVELYKRRLE-RQNQLSKGIVTQEKLDQVEADYEIGRRDLQTEILKH 146

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           ++  I L R + + +  ++R+ +     +  M
Sbjct: 147 KLNGIELQRAEAQLELRMIRSPIRGIVTERLM 178


>gi|148259577|ref|YP_001233704.1| secretion protein HlyD family protein [Acidiphilium cryptum JF-5]
 gi|146401258|gb|ABQ29785.1| secretion protein HlyD family protein [Acidiphilium cryptum JF-5]
          Length = 348

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/139 (10%), Positives = 36/139 (25%), Gaps = 8/139 (5%)

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                    I +P++G +      +  N       +M +V      ++ A     ++  +
Sbjct: 209 ARLELGYTEIRAPVSGWVAKKTVRT-GNVVGAGTAMMAVV--GDHVWVTANYKETELGAI 265

Query: 343 KKGYTATVRFP-----HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           + G +  V         +                 + ++       +    V ++I    
Sbjct: 266 RPGQSVNVYVDAVPGVAFHARVASIQHGTGSIFSLLPAENATGNYVKVVQRVPVRIEFDD 325

Query: 398 FSDNNIELRNGFPAEVLFT 416
              +   L  G   E    
Sbjct: 326 SRISRYLLAPGMSVEPYIR 344



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 12/115 (10%), Positives = 39/115 (33%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + ++ +I    SG +    V++   +++G  L+  +D      +D  +      +  +  
Sbjct: 63  DGSIHQIAPRISGQVVAVLVKDNQHVVRGQLLVRLDDGTQKVALDRAEAERAQAQAQLGA 122

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            ++ L       +V +      +     +        +      I++  R+   +
Sbjct: 123 READLAEARANVEVADATLFRAKRDEARYAKVDPRAVTPTTRDAIAADLRAAVAR 177


>gi|329850283|ref|ZP_08265128.1| chromosome segregation protein SMC [Asticcacaulis biprosthecum C19]
 gi|328840598|gb|EGF90169.1| chromosome segregation protein SMC [Asticcacaulis biprosthecum C19]
          Length = 1156

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 74/214 (34%), Gaps = 8/214 (3%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +G  L  ++ +                R  +D  ++ +  L  ++   + A     +  
Sbjct: 609 KEGD-LWRWDGLIVRAKAPKPAAVRLAQRNRLDELEADIAVLKPRFTEAQTA-----QTT 662

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                + H    +     I  + R ++ K   +      +   E +   L A L     D
Sbjct: 663 AADAQRRHEDTVRQARNRIPDLERLVRSKQLALEERLRAQTHYEARLEGLEASLVRLSGD 722

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              M+NL+     SQ+D      +             ++++++R   EL  E +   A  
Sbjct: 723 HGEMENLYRLAVASQSDALDTATMKATLDAARAIAEGKRQSVMRARAELDQEMSNRAARE 782

Query: 259 LKE--ISRDLEQNQRTFADEMSKLTILEKTREQK 290
            +E  +SR+L    R   D  S+L  LEK +E  
Sbjct: 783 GRERTLSRELADWTRRTQDSGSRLIKLEKDQEAT 816


>gi|294664149|ref|ZP_06729537.1| membrane fusion protein precursor [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292606082|gb|EFF49345.1| membrane fusion protein precursor [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 414

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/135 (10%), Positives = 44/135 (32%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +     G +     + G ++ +G  L   +        D    + 
Sbjct: 64  ASALGTVTA-LNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAK 122

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +      N+      V     +++  Q+  +     +  +++ +  +   
Sbjct: 123 RQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVAANDAQMRSAQVQLQ 182

Query: 161 YRSLKMKLTRMRSIY 175
           +  +   +  +  I 
Sbjct: 183 FTRVTAPIDGIAGIR 197



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 53/146 (36%), Gaps = 5/146 (3%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEI 262
            +K   ++Q D    +    ++    R+N         +     D A  ++ +   L   
Sbjct: 97  VKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQ 156

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + Q +   A   +++   +   +   + +PI G I   +     N    S  ++ + 
Sbjct: 157 RNQVAQYEAAVAANDAQMRSAQVQLQFTRVTAPIDG-IAGIRGVDVGNIVTSSSTIVTLT 215

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTA 348
              +  Y+   +  +++Q V+ G TA
Sbjct: 216 -QIRPIYVSFNLPERELQAVRTGQTA 240


>gi|260592682|ref|ZP_05858140.1| multidrug resistance protein, AcrA/AcrE family [Prevotella
           veroralis F0319]
 gi|260535452|gb|EEX18069.1| multidrug resistance protein, AcrA/AcrE family [Prevotella
           veroralis F0319]
          Length = 443

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 53/172 (30%), Gaps = 9/172 (5%)

Query: 35  SILLPIEISVSSS--GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           +    ++ +  ++  G    E          SG I K  V  G  +  G  L   ++   
Sbjct: 40  ASNAQLKTTYPATLKGVQDVEVRPKV-----SGFITKLYVHEGEYVHAGQVLFVVDNSTY 94

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +   +  + + +  +   ++ +   N   +       +      +    Y++    +
Sbjct: 95  QAAVRQAEAQVNSAQSAVAQAEAGVVQANASLNSANAQAATARLTYSNSKNLYNNKV--I 152

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            +Y + S   S +     +R         +      +A +   Q  L+  K+
Sbjct: 153 GDYELQSAKNSFETSQAAVRQAQSGVASAQAAVRQAQAGVRQAQAMLSTAKD 204


>gi|126736695|ref|ZP_01752434.1| efflux transporter, RND family, MFP subunit [Roseobacter sp. CCS2]
 gi|126713810|gb|EBA10682.1| efflux transporter, RND family, MFP subunit [Roseobacter sp. CCS2]
          Length = 366

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 11/145 (7%)

Query: 214 NDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLK------EISR 264
             + Q E  + ++   +   R  +   +  L  I  L   ++     +        E   
Sbjct: 90  IQVAQSEAQLAEAAAGIETARARVDRARIGLDRIEALRGGSSFSQGRFDDAQADFLEAEA 149

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
              + Q       S+L       E+  I +P +G ++   +     + Q   P+++++  
Sbjct: 150 QFVEAQAREKSAQSRLAETRYQLERSKIRAPFSGVVLEVNTI-PGAFIQAGTPVVRLL-D 207

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTAT 349
           +    ++A V  +    +  G   T
Sbjct: 208 TDAFEVQANVPSRYTSFLSPGQMVT 232



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           G +++  V  GS++ +G  L+   D        ++   +      I+  R  +D  +  L
Sbjct: 61  GNVERVIVLAGSRVAEGDLLVELNDDLLTIQVAQSEAQLAEAAAGIETARARVDRARIGL 120

Query: 118 DFLNN----------KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           D +            ++D  +  F   E Q ++   +  S  S++           ++ 
Sbjct: 121 DRIEALRGGSSFSQGRFDDAQADFLEAEAQFVEAQAREKSAQSRLAETRYQLERSKIRA 179


>gi|116062151|dbj|BAF34706.1| fast skeletal myosin heavy chain isoform mMYH-11 [Oryzias latipes]
          Length = 1939

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 86/211 (40%), Gaps = 12/211 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            E+ + ++ K  S++  +  +  E   L    +  N+    L+K   + ++ L ++  KY 
Sbjct: 1406 ESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYE 1465

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             + +++   G     RSL  +L +M++ Y   LD   +   ++    + Q++++ +    
Sbjct: 1466 ESQAEL--EGAQKEARSLSTELFKMKNSYEEALD---QLETMKRENKNLQQEISDLTEQI 1520

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             +N  S ++L + ++ V    +EL+  + E +  L H         LE      EI R L
Sbjct: 1521 GENGKSIHELEKAKKTVENEKIELQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKL 1580

Query: 267  EQNQRTFADEM---SKLTILEKTREQKTILS 294
             +             ++    ++     + S
Sbjct: 1581 AEKDEEMEQIKRNSQRVIESMQSTLDAEVRS 1611



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 77/229 (33%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1210 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKSKGNLEKMCRTLEDQLSELKAKN 1267

Query: 146  HSTCSK-----VFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDL 199
                 +     V    + +       +L    ++        +  +  +  L    ++++
Sbjct: 1268 DENVRQLNDINVQKARLQTENGEFARQLEEKEALVSQLTRGKQAFTQQIEELKRHVEEEV 1327

Query: 200  TMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                 L      +++D   L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1328 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1387

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   + +  +     + E+      + G +     
Sbjct: 1388 EELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQR--LQGEVEDLMI 1434



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K   I  L   I+ E+S    L  K   L+   
Sbjct: 1060 EGDLKLAQESIMDLENDKQQSDEKIKKKDFEISQLLSKIEDEQSLGAQLQKKIKELQARI 1119

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1120 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1173

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1174 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1228

Query: 252  NLEFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +    +        +LE+  RT  D++S+L        ++
Sbjct: 1229 KMEIDDLSSNMEAVAKSKGNLEKMCRTLEDQLSELKAKNDENVRQ 1273


>gi|85716759|ref|ZP_01047727.1| Secretion protein HlyD [Nitrobacter sp. Nb-311A]
 gi|85696477|gb|EAQ34367.1| Secretion protein HlyD [Nitrobacter sp. Nb-311A]
          Length = 411

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 53/135 (39%), Gaps = 3/135 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V+++G+I     V ++ +  SG +K+  V  G ++  G  +   +       ++  
Sbjct: 73  IESTVAATGKIQPHAYV-DVGAQVSGQLKRLHVAVGDKVTAGMVVAEIDAEMQAAKVEGI 131

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +  L   +  +++ L F   K +V      S+   +     +  +    +    I +
Sbjct: 132 EADLARLSAELAEQEAGLVF--AKRNVERHLTLSQTSAVSQLAFETTTRDRDILIARIDA 189

Query: 160 VYRSLKMKLTRMRSI 174
               ++     +R+ 
Sbjct: 190 SKARIRQMQADLRAQ 204



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 98/317 (30%), Gaps = 45/317 (14%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                 T +     +     +   A+     Q+   L + H         G+       +
Sbjct: 63  YETAAVTRQDIESTVAATGKIQPHAYVDVGAQVSGQLKRLHVAVGDKVTAGMVVAEIDAE 122

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           M+  ++  I  +   L  + +   A L   ++++     L + +AVSQ       R    
Sbjct: 123 MQAAKVEGIEADLARLSAELAEQEAGLVFAKRNVERHLTLSQTSAVSQLAFETTTRDRDI 182

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
               +  +    + M                                 AD  ++ T L  
Sbjct: 183 LIARIDASKARIRQMQ--------------------------------ADLRAQKTALRF 210

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            R    I +P+ GT+V   +         +   PL+  +       +   V+   +  ++
Sbjct: 211 AR----ITAPMGGTVVSVDA-KEGQTLNANYDTPLILQIADLDTMTVWTDVSEADVVKLR 265

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE---VILKITDLAFSD 400
           +G    + F       ++K+ A + +I P   + D   + +   +   V+L        +
Sbjct: 266 EGMP--LWFTTLG-RPDRKWHARLRQIQPAPRRPDKKAEPKAATQSGNVVLYTALFDIPN 322

Query: 401 NNIELRNGFPAEVLFTA 417
            +  LR G  A+V F  
Sbjct: 323 EDGGLRAGMTAQVFFVT 339


>gi|126174734|ref|YP_001050883.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS155]
 gi|217973007|ref|YP_002357758.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS223]
 gi|304409111|ref|ZP_07390732.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS183]
 gi|307303114|ref|ZP_07582869.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           BA175]
 gi|125997939|gb|ABN62014.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS155]
 gi|217498142|gb|ACK46335.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS223]
 gi|304352932|gb|EFM17329.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS183]
 gi|306913474|gb|EFN43896.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           BA175]
          Length = 354

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 78/205 (38%), Gaps = 16/205 (7%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E  AV + D  Q+ +++     + ++   ++      I E       +  N     + 
Sbjct: 73  LIESLAVEEGDRVQKGQVLAVIDAKRQQYDLDRSEAEVKIIEQELNRLKKMGNKEFISAD 132

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            + + +      ++K  + E    +  +LSPI+G +V  +   + N A++   L  IV +
Sbjct: 133 SMAKLEYNLQAAIAKKDLAELQVRESRVLSPISG-VVAKRYVKAGNMAKEFGDLFYIV-N 190

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
               +    +  +Q+  ++ G  A V F       +    A + +I PI+  Q       
Sbjct: 191 QDELHGIVHLPEQQLASLRLGQEAQV-FS--NQQSKNAIHAKVLRISPIVDPQSGT---- 243

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
             ++V L + +         L+ G 
Sbjct: 244 --FKVTLAVPNQEA-----RLKAGM 261



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 14/171 (8%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S  SG+I+   VE G ++ +G  L   +       +D  +  +K     I+ E + L 
Sbjct: 66  VVSRISGLIESLAVEEGDRVQKGQVLAVIDAKRQQYDLDRSEAEVKI----IEQELNRLK 121

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            + NK  +   +    E  L   + K      +V    + S    +  K       Y+  
Sbjct: 122 KMGNKEFISADSMAKLEYNLQAAIAKKDLAELQVRESRVLSPISGVVAKR------YVKA 175

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            ++  +   L      +Q +L  + +L E+   S      QE  V+ +   
Sbjct: 176 GNMAKEFGDL--FYIVNQDELHGIVHLPEQQLASLR--LGQEAQVFSNQQS 222


>gi|302343235|ref|YP_003807764.1| efflux transporter, RND family, MFP subunit [Desulfarculus baarsii
           DSM 2075]
 gi|301639848|gb|ADK85170.1| efflux transporter, RND family, MFP subunit [Desulfarculus baarsii
           DSM 2075]
          Length = 383

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 43/117 (36%), Gaps = 2/117 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K+  V  G ++  G  L   + ++  + I  +  ++K     ++  ++  D+   + 
Sbjct: 73  GRVKRLDVHVGERVKAGQVLGEMDPVDLDERIRAQDATLKRANAQLNEAQARKDYAQTQA 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              E+  ++R         K       V   G+++    L        ++   R +L
Sbjct: 133 LRYEQLLKARSTSEEVVATKQQDLL--VAKAGLTAAREELSRVRAEREALEAQRSNL 187



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/179 (10%), Positives = 62/179 (34%), Gaps = 20/179 (11%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD--------- 265
            +  Q+  + ++  +L E   + +        L  E  L+  +  +E+            
Sbjct: 103 RIRAQDATLKRANAQLNE--AQARKDYAQTQALRYEQLLKARSTSEEVVATKQQDLLVAK 160

Query: 266 --LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L   +   +   ++   LE  R   ++++P+ G +V  +           Q +++++ 
Sbjct: 161 AGLTAAREELSRVRAEREALEAQRSNLSLVAPVDGLVVS-RDADPGTTVVAGQAVVELI- 218

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK-AIIEKIDPIISQQDNNL 381
                ++  +    + + +  G +A +        +  + +   + +++P+        
Sbjct: 219 DPSTLWVNVRFDQIRARGLAAGLSAQITL----RSQAGELQAGRVLRVEPLADAVTEET 273


>gi|114640637|ref|XP_001162821.1| PREDICTED: pleckstrin homology-like domain, family B, member 1
           isoform 17 [Pan troglodytes]
          Length = 1409

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 24/229 (10%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++ +V     + +    L     E      L +   +  R  +  E+ A+D L  K 
Sbjct: 725 GRVEQLKVR----VKELEQQLQESAREAEMERALLQGEREAERALLQKEQKAVDQLQEKL 780

Query: 125 DVLEKAFE-SREEQLLDFLGKYHSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNR 178
             LE   +  R+++  +         ++          + +   S++ +L          
Sbjct: 781 VALETGIQKERDKERAELAAGRRHLEARQALYAELQTQLDNCPESVREQLQEQLRREAEA 840

Query: 179 LDLENKS-SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           L+ E K    L       +  +   + L  +  +             +S  EL  +I ++
Sbjct: 841 LETETKLFEDLEFQQLERESRVEEERELAGQGLL-------------RSKAELLRSIAKR 887

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           K  L  ++    +   +     + ++RD   + +    E  KLT+LE+ 
Sbjct: 888 KERLAILDSQAGQIRAQAVQESERLARDKNASLQLLQKEKEKLTVLERR 936



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 19/192 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +S+ +       + E    S EE L +      ST  +  +   + +   +         
Sbjct: 663 RSSEEPGVATQRLWESMERSDEENLKEECSSTESTQQEHEDAPSTKLQGEVLALEEERAQ 722

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-------------EKNAVSQND--LNQ 218
           +      L+ +   L   L    ++  M + L              E+ AV Q    L  
Sbjct: 723 VLGRVEQLKVRVKELEQQLQESAREAEMERALLQGEREAERALLQKEQKAVDQLQEKLVA 782

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFA 274
            E  + K   + R  +   +  L     LY E   +  N      +++   L +      
Sbjct: 783 LETGIQKERDKERAELAAGRRHLEARQALYAELQTQLDNCPESVREQLQEQLRREAEALE 842

Query: 275 DEMSKLTILEKT 286
            E      LE  
Sbjct: 843 TETKLFEDLEFQ 854


>gi|302344412|ref|YP_003808941.1| efflux transporter, RND family, MFP subunit [Desulfarculus baarsii
           DSM 2075]
 gi|301641025|gb|ADK86347.1| efflux transporter, RND family, MFP subunit [Desulfarculus baarsii
           DSM 2075]
          Length = 348

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 73/201 (36%), Gaps = 18/201 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V+ ND ++ ++    + +++            + N   D+A        K +    E ++
Sbjct: 81  VTVNDGDKVKKGQIVAEIDVAALKTALDRAKANYNMAADQAKRRRPLIDKGVIGREEYDK 140

Query: 271 RTFADEMSK--LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
              A  +++  L   +    +  + +PI G + +    +   +  +  P+  IV ++   
Sbjct: 141 VETARLVAQGELREAQVLYNKGFVRAPIDGRVNHLHVDA-GEFVDKGNPVADIV-NTDQI 198

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +   V    ++++K G  + V        +         +ID +  + D   +T   ++
Sbjct: 199 RVNVSVPELDVRYIKVGQPSRVTMDAMPGRQW------FGRIDFVAFKADPATRT---FK 249

Query: 389 VILKITDLAFSDNNIELRNGF 409
             + +      + +  +R G 
Sbjct: 250 ARVVLD-----NADGAIRPGM 265



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 31/86 (36%), Gaps = 3/86 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD---FLN 121
           G ++   V +G ++ +G  +   +       +D  K +           +  +D      
Sbjct: 76  GRVETVTVNDGDKVKKGQIVAEIDVAALKTALDRAKANYNMAADQAKRRRPLIDKGVIGR 135

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHS 147
            +YD +E A    + +L +    Y+ 
Sbjct: 136 EEYDKVETARLVAQGELREAQVLYNK 161


>gi|302877942|ref|YP_003846506.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
 gi|302879910|ref|YP_003848474.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
 gi|302580731|gb|ADL54742.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
 gi|302582699|gb|ADL56710.1| efflux transporter, RND family, MFP subunit [Gallionella
           capsiferriformans ES-2]
          Length = 527

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 19/192 (9%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS-KLTILEKTREQKTIL 293
            +++  +    E   E   E      +   D    +    D    ++  L   + ++++ 
Sbjct: 165 AQREYAIAAQGEAKLENADEETKAGMKQLADASLARLKNWDITPGEIKQLTTGKSRRSLT 224

Query: 294 --SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
             +P++G ++  ++          + L +I       ++ A +  + I  V  G  A V 
Sbjct: 225 YYAPVSGIVLEKKAV-QGMRFMPGETLYQIA-DLSQVWVLADINEQDIGQVTTGSDAQVS 282

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              Y D   K FK  +  + P ++     +Q      V ++I     ++    L+    A
Sbjct: 283 IGAYPD---KLFKGKVAFVYPTLNSATRTVQ------VRVEI-----ANPQGLLKPSMFA 328

Query: 412 EVLFTAKNTTLA 423
            V     + T  
Sbjct: 329 NVTLPVGSNTRM 340


>gi|154496082|ref|ZP_02034778.1| hypothetical protein BACCAP_00366 [Bacteroides capillosus ATCC
           29799]
 gi|150274637|gb|EDN01701.1| hypothetical protein BACCAP_00366 [Bacteroides capillosus ATCC
           29799]
          Length = 1341

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 72/227 (31%), Gaps = 16/227 (7%)

Query: 74  NGSQILQG-TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            G+ +     PL  F       L    +  I   +  +D+  + L     +Y   +KA +
Sbjct: 556 EGNPVEPNPEPLKAFFSQSIPGLFAAGEEQIAAGQAQLDSAAAQLAAGQAQYAEGKKAVD 615

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR--- 189
               +  + + +       +F   +  +    K      + +     ++ +    L    
Sbjct: 616 EARAEFEEGVKQSQEAAQTLFEARV-ELEDGWKQLADGRKELDDGWREVADAKQELDDGW 674

Query: 190 -ALLSSHQKDLTMMKNLF----------EKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             L  + Q+ L   + L           ++      DL + +  +     +  + + + K
Sbjct: 675 AELEDAKQEILDGEQELADARAELDDGWQQYYDGVADLAEAKATLPGELADAEQELKDAK 734

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             L    +   +   E+A+   E   +L   ++   D   ++  +E 
Sbjct: 735 QELDDGYQELLDGEQEYADGKAEAEEELSDARQKLNDARREVAEIED 781


>gi|157865921|ref|XP_001681667.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68124965|emb|CAJ02684.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 1316

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 70/199 (35%), Gaps = 3/199 (1%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            L ++  +  R      ++  +  +     L  A + +EEQL           +++    
Sbjct: 155 QLIQLQAEVHRAESKHREALREQADTHAQQLRSALQEKEEQLQAKAAATR-REARLVQQE 213

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-LFEKNAVSQND 215
           +  +            S+     +LE   +    L    ++ +TM+++ L ++   ++ D
Sbjct: 214 LDQLGAGHTAAHEERESMRWRLSELETVVTKKEQLRVELERMVTMLRSRLDDQEEAARQD 273

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + +  +      L  R  + +++   + + +    A       +++     + +     D
Sbjct: 274 VQRYAQRAQDLELLYRGQVAQEQRRAQALQDDLAAARKATQEAMRQQEALQQSHSEQAKD 333

Query: 276 EMSKLTILEKTREQKTILS 294
             ++   LE    ++ + +
Sbjct: 334 FATRAAKLEDDL-RQQLRA 351



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 72/230 (31%), Gaps = 22/230 (9%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L+  +          ++   +    H    +SAL     +    + A   RE +L+    
Sbjct: 156 LIQLQAEVHRAESKHREALREQADTHAQQLRSALQEKEEQLQA-KAAATRREARLVQQEL 214

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                     +    S+   L    T +      R++LE   ++LR+ L   ++      
Sbjct: 215 DQLGAGHTAAHEERESMRWRLSELETVVTKKEQLRVELERMVTMLRSRLDDQEEAARQDV 274

Query: 204 NLFEKNA-----VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--------- 249
             + + A     + +  + Q++R       +L       +  +R    L           
Sbjct: 275 QRYAQRAQDLELLYRGQVAQEQRRAQALQDDLAAARKATQEAMRQQEALQQSHSEQAKDF 334

Query: 250 -----EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                +   +    L+ + R+LE+ Q    +  +        R+  T+ +
Sbjct: 335 ATRAAKLEDDLRQQLRALRRELEEAQARALEHEA--AARRSQRDADTLRA 382


>gi|254250346|ref|ZP_04943665.1| Secretion protein HlyD [Burkholderia cenocepacia PC184]
 gi|124879480|gb|EAY66836.1| Secretion protein HlyD [Burkholderia cenocepacia PC184]
          Length = 324

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 62/175 (35%), Gaps = 9/175 (5%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q      ER+   +  + R  + + K       +L    NL  +  ++E    +EQ 
Sbjct: 77  VIDQARYTLAERLAEATLAQRRATLAQAKREYARNLQLG---NLVASEQVEESRTRVEQG 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           + + AD    L   +   ++ TI+SP+ G  + +++  +  Y    + ++ +V       
Sbjct: 134 EASVADAQVSLDTAKLNLQRTTIVSPVDGY-LNDRAPRAGEYVPAGRAVLSVV-DRNSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +       +++ +  G    +             +  ++ I   I  +D      
Sbjct: 192 VDGYFEETKLRGIHIGQPVDIIVMGEPH----ALRGHVQSIVAAIEDRDRTQGAN 242



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 61/169 (36%), Gaps = 23/169 (13%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW--------SILLPIEISVSSSGEILNEDNVVEIK 60
           +K+   ++ + +  L ++ + GL+ W        S     +  V +        +V+++ 
Sbjct: 1   MKKTWLSAGQVLLTLIVVIVAGLVLWRIINYYMFSPWTR-DGHVRA--------DVIQVA 51

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG+I   QV +  ++ +G  L   +    T    L + ++   R  +   K      
Sbjct: 52  PDVSGLITSVQVADNQEVKRGQVLFVIDQARYTLAERLAEATLAQRRATLAQAKREYAR- 110

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 L+       EQ+ +   +     + V +  +S     L ++ T
Sbjct: 111 -----NLQLGNLVASEQVEESRTRVEQGEASVADAQVSLDTAKLNLQRT 154


>gi|83952790|ref|ZP_00961520.1| Putative Membrane Fusion Protein Family member [Roseovarius
           nubinhibens ISM]
 gi|83835925|gb|EAP75224.1| Putative Membrane Fusion Protein Family member [Roseovarius
           nubinhibens ISM]
          Length = 397

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 56/204 (27%), Gaps = 33/204 (16%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             ++     L                 +   +   A L+  Q+DL   + L ++N  +Q+
Sbjct: 102 AALTQAKAELAQLDAAEAKAKDALTLAKASVTSANASLAKLQQDLDQAQTLLDRNVGTQD 161

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + E  V  +         +       +++                       QR  A
Sbjct: 162 KVRELEAAVISAEATREAAKAQTDVAETDLSQSIP-------------------AQRAVA 202

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN-----YAQQSQPLMKIVP---HSK 326
           +  + +   +   +   + +   GT+      S  +       +     M I+P      
Sbjct: 203 E--AAVQRAQVELDHTEVRAYADGTVTQMAM-SVGSPASQLVLRPG---MVIIPERGEDA 256

Query: 327 LTYIRAKVTPKQIQHVKKGYTATV 350
              + A         + +G  A +
Sbjct: 257 HLRVIAGFPQVARATLYEGMPAEI 280



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 50/146 (34%), Gaps = 8/146 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-------RCHIDTEKSAL 117
           G + +  VENG  +  G  L   E+   T  +   K  +  L       +  +   K+++
Sbjct: 73  GPVTEVAVENGQAVKAGDLLFRIENSSQTAALTQAKAELAQLDAAEAKAKDALTLAKASV 132

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
              N     L++  + + + LLD          ++    IS+       K     +    
Sbjct: 133 TSANASLAKLQQDLD-QAQTLLDRNVGTQDKVRELEAAVISAEATREAAKAQTDVAETDL 191

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMK 203
              +  + ++  A +   Q +L   +
Sbjct: 192 SQSIPAQRAVAEAAVQRAQVELDHTE 217


>gi|304411281|ref|ZP_07392896.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS183]
 gi|307306564|ref|ZP_07586307.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           BA175]
 gi|304350474|gb|EFM14877.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS183]
 gi|306910855|gb|EFN41283.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           BA175]
          Length = 405

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 65/202 (32%), Gaps = 26/202 (12%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++  +   E+   K+  +L +           +  + D    E     K+   +L +N 
Sbjct: 111 VTKGQVIA-EQDNTKAKADLDKAKSTLALAKTKLERIEDLLIKEPFALAKQDVDELRENV 169

Query: 271 RTF-ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               AD   K   +        I +P  G  + + S S  +       L+ +   +    
Sbjct: 170 NLADADFRQKQATMNDYL----IKAPFDGQ-LTSFSQSIGSQIGAGTALVTLYSLNP--- 221

Query: 330 IRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
           +  +  ++       +KG    V    Y +   K FK ++  + P + +           
Sbjct: 222 VEVRYAISQNDFGKAQKGQKVNVTVEAYGN---KVFKGLVNYVAPAVDESSG-------- 270

Query: 388 EVILKITDLAFSDNNIELRNGF 409
              +++   A  +   +L  G 
Sbjct: 271 --RVEV-HAALDNPEFKLAPGM 289



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 44/114 (38%), Gaps = 18/114 (15%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--------- 117
           I      NG ++ +G  +   ++ +    +D  K ++   +  ++  +  L         
Sbjct: 100 ISAIHFSNGDKVTKGQVIAEQDNTKAKADLDKAKSTLALAKTKLERIEDLLIKEPFALAK 159

Query: 118 ---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
              D L    ++ +  F  ++  + D+L K        F+  ++S  +S+  ++
Sbjct: 160 QDVDELRENVNLADADFRQKQATMNDYLIKAP------FDGQLTSFSQSIGSQI 207


>gi|296314917|ref|ZP_06864858.1| macrolide-specific efflux protein MacA [Neisseria polysaccharea
           ATCC 43768]
 gi|296838103|gb|EFH22041.1| macrolide-specific efflux protein MacA [Neisseria polysaccharea
           ATCC 43768]
          Length = 427

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 2/132 (1%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +VS++GEI    N+V + +  SG IKK  V  G Q+ +G  +        T+ ++++K  
Sbjct: 81  TVSATGEISPS-NLVSVGAQASGQIKKLYVRLGQQVKKGDLIAEINSTTQTNTLNMEKSK 139

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGISSVY 161
           ++  +  + + + AL     KY      ++       D    +     +K     + ++ 
Sbjct: 140 LETYQAKLASAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELKALI 199

Query: 162 RSLKMKLTRMRS 173
           R  K+ +    S
Sbjct: 200 RQSKISINTAES 211



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 79/262 (30%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        RL  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 95  SVGAQASGQIKKLYVRLGQQVKKGDLIAEINSTTQTNTLNME--------KSKLETYQAK 146

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        +    E      + L     ++ + +         +
Sbjct: 147 LASAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELKALIRQSKISI 206

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 207 NTAESELGYTRITATMDGTVVAIPV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 265

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 266 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 322

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 323 SFVP-----NPDGKLATGMTTQ 339


>gi|261757330|ref|ZP_06001039.1| HlyD family secretion protein [Brucella sp. F5/99]
 gi|261737314|gb|EEY25310.1| HlyD family secretion protein [Brucella sp. F5/99]
          Length = 229

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 68/193 (35%), Gaps = 29/193 (15%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW-------------SILLP------IEISVSSS 47
            + ++      +    LS   II    W             S L        IE ++++ 
Sbjct: 15  ASARKRAKGKRRWWLWLSAAAIIIGAGWYFYGSYKADGEKSSYLAETVTRGDIENAITAV 74

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G + +    V + +  SG +K  +VE G  + QG  +   +       +++    + NL+
Sbjct: 75  GTL-SALRSVNVGTQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIAGAQLDNLK 133

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             + ++ + L         L+K   +R++ LL   G   +T  +  N  +      +K  
Sbjct: 134 AQLLSKDAQL--------TLKKLNAARQKSLLATRGVSQATVDQA-NADLLMAEAEVKAL 184

Query: 168 LTRMRSIYLNRLD 180
             ++R        
Sbjct: 185 NAQIRQQEAQLAS 197


>gi|271499377|ref|YP_003332402.1| RND family efflux transporter MFP subunit [Dickeya dadantii Ech586]
 gi|270342932|gb|ACZ75697.1| efflux transporter, RND family, MFP subunit [Dickeya dadantii
           Ech586]
          Length = 405

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 14/188 (7%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           R +      +  +   L   L +  K   ++  + +     QN L   +  +     +L 
Sbjct: 61  RKLVSVGAQVSGQIKALHVALGNKVKQGQLLAEIDD--LTQQNTLQDSKAALDNIQAQLA 118

Query: 232 ENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL-------TI 282
             +   +N  R     +   +  +            LE          +++         
Sbjct: 119 SKLATLRNNQRNWQRQQRLMQTGVGVQADYDSAQTTLEATLADIHALEAQIVRANIAVNT 178

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +       I+SPIAGT+V             Q +  + KI        I AK++   + 
Sbjct: 179 AQVNLAYTKIVSPIAGTVVALPVEQGQTVNAVQSAPTIAKIA-SLDTMTIEAKISEADVI 237

Query: 341 HVKKGYTA 348
           +VK G   
Sbjct: 238 NVKTGMPV 245



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 71/188 (37%), Gaps = 29/188 (15%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSIL-----LP-------------IEISVSSSGEILNE 53
             P    R     ++  + +  ++ +      P             ++ +V + G + N 
Sbjct: 2   KSPLGTGRRVWWLLLLPVAIAVFAAILLSRPAPGRNYITAAVDTRDLQQTVLADGTV-NA 60

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
             +V + +  SG IK   V  G+++ QG  L   +D+   + +   K ++ N++  + ++
Sbjct: 61  RKLVSVGAQVSGQIKALHVALGNKVKQGQLLAEIDDLTQQNTLQDSKAALDNIQAQLASK 120

Query: 114 KSAL----------DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            + L            L      ++  ++S +  L   L   H+  +++    I+     
Sbjct: 121 LATLRNNQRNWQRQQRLMQTGVGVQADYDSAQTTLEATLADIHALEAQIVRANIAVNTAQ 180

Query: 164 LKMKLTRM 171
           + +  T++
Sbjct: 181 VNLAYTKI 188


>gi|227488449|ref|ZP_03918765.1| efflux system protein [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227091663|gb|EEI26975.1| efflux system protein [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 647

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 66/226 (29%), Gaps = 6/226 (2%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC----HIDTEKSALDFLNN 122
           ++   V  G ++     L   +       +D ++             I   +  L     
Sbjct: 126 VQDLPVAVGDRVKANQLLARMDTSSLERELDSQRQQQSASSSESQNAIKQAQQQLAQQRE 185

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           K D       +     L           + F      V +     L + +          
Sbjct: 186 KLDRGLNQEINSANSALRDANLQLEGAKQDFANRAQQVEKDNDPALQQQKDAAEQARKAA 245

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQE-RIVYKSTLELRENIHEQKNM 240
             + L RA        +  +    E  A +++  L+Q + + + + T ELRE   ++   
Sbjct: 246 RDADLARAQAEFGLATVQRVNGAAEHQADLNRARLDQLKNQDLSRLTPELREAAEQEIAS 305

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           L++  +  + A  E    +      L Q +   +D     T  E  
Sbjct: 306 LQNTIDGENGARAERDQSIANAVTSLRQAENQASDAKDARTKAENR 351


>gi|217969445|ref|YP_002354679.1| hypothetical protein Tmz1t_1020 [Thauera sp. MZ1T]
 gi|217506772|gb|ACK53783.1| secretion protein HlyD family protein [Thauera sp. MZ1T]
          Length = 345

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 110/331 (33%), Gaps = 35/331 (10%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           D  +     L  ++D  +  L F      +     E     +   L    +   +     
Sbjct: 34  DHGQQDALRLYGNVDIREVQLAFRQPGRVMQMAFDEGDAVSVGARLAALDAQPYREALAA 93

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN--LFEKNAVSQN 214
             +  +  + +L ++R     +   + + +L +A   + + +    +   L    A SQ 
Sbjct: 94  AQAQVQVAQAELAKLRRGLRPQEITQAREALRQAQALATETERNFKRQSGLLTSGASSQ- 152

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                 R V  +     +     +     +++  +    E          D+   +   A
Sbjct: 153 ------RTVDAARTARDQAAAGVEAAKAALSQASEGFRKE----------DIAAAEARLA 196

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +             +++P +GT++  +     +    SQ  +  +   K  Y+RA V
Sbjct: 197 AAQAAAAQATTALADTELVAPSSGTVIA-RVREPGSMV-ASQSAVYSLSLDKPVYVRAYV 254

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEV 389
               +  +  G    V+    +D  EK ++  I  I P       + +  +L+T   Y +
Sbjct: 255 GESDLGRIAPGTVVRVK----SDSSEKVYRGQIGFISPRAEFTPKTVETTDLRTDLVYRL 310

Query: 390 ILKITDLAFSDNNIELRNGFPA--EVLFTAK 418
            + I +   +D++  LR G P   EV   A 
Sbjct: 311 RIVIDE---ADSDSALRQGMPVTIEVDAKAG 338


>gi|158425620|ref|YP_001526912.1| hypothetical protein AZC_3996 [Azorhizobium caulinodans ORS 571]
 gi|158332509|dbj|BAF89994.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 307

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 63/174 (36%), Gaps = 15/174 (8%)

Query: 20  MTLLSIIGIIGLITWSILLPIEI------------SVSSSGEILNEDNVVEIKSPFSGII 67
           + LL+ IG+ G+  W++L P E               ++ G +  E  +  I +   GI+
Sbjct: 12  LGLLTCIGL-GIGAWALLGPDESQADPNLSAQSGIVAAARGRVDVEGGLSRILASRDGIV 70

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           ++ +V  G ++  G  L   +       +   +  +   +       +       + + +
Sbjct: 71  REVRVSEGQRVAAGDLLAELDTRAAAIALRAAEAEVAEAQARRTALDARRTAQLRQTERM 130

Query: 128 EKAFESRE--EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
            +A + +    Q LD      +  +     G +++ ++     T    +   ++
Sbjct: 131 RRAAKEQAISPQALDETEAALAALTADLRLGEAALAQATAKMETARYEMEQRQV 184



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 83/256 (32%), Gaps = 10/256 (3%)

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +  +  +     GI +  R        +  I  +R  +  +  +      +    L  + 
Sbjct: 32  ESQADPNLSAQSGIVAAARGRVDVEGGLSRILASRDGIVREVRVSEGQRVAAGDLLAELD 91

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRE----NIHEQKNMLRHINELYDEANLEFANYL 259
                 A+   +    E    ++ L+ R        E+         +  +A  E    L
Sbjct: 92  TRAAAIALRAAEAEVAEAQARRTALDARRTAQLRQTERMRRAAKEQAISPQALDETEAAL 151

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
             ++ DL   +   A   +K+       EQ+ + +P+AG +      +    +  +   M
Sbjct: 152 AALTADLRLGEAALAQATAKMETARYEMEQRQVRAPVAGIVARRNVKAGDVMSGAAMTEM 211

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++       ++A++    ++ ++ G  A +                + +I P +  +  
Sbjct: 212 FVLIPDAPLVVKAEIQEPFVRLLRPGMEAEITAESDDQSTG---TGRLLRISPFLDTRRT 268

Query: 380 NLQTQEYYEVILKITD 395
              T+    V +++ D
Sbjct: 269 ADATE---RVDVRVAD 281


>gi|146282860|ref|YP_001173013.1| membrane fusion protein [Pseudomonas stutzeri A1501]
 gi|145571065|gb|ABP80171.1| membrane fusion protein [Pseudomonas stutzeri A1501]
          Length = 394

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 72/245 (29%), Gaps = 29/245 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + + + LR   ++ Q+ +   +   +          +Q        L+ RE + E+K + 
Sbjct: 93  DEQRARLREAEAALQQLIDSTRPQAQATLREAQHNLEQ----ASRELQRRETLFERKLLA 148

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADE---MSKLTILEKTREQKTILSPIAG 298
               E    A L                    ++E     +L +      +  I + + G
Sbjct: 149 SEPLEQARRAELTARVVRDRARFAAAALAEGGSEEQVLRQRLEVARANLARTRIHAQVDG 208

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ---IQHVKKGYTATVRFPHY 355
            +   +     +  Q  + L+ I            + P     +  ++ G +A +    Y
Sbjct: 209 IVQS-RDVEPGDLVQPGRTLLTIARSGSSEI----LLPLDEKSLAPIEHGQSARIIADAY 263

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            D       A +  I P +      +       V L + + A     + LR G    V  
Sbjct: 264 PDR---VLTAKVSFIAPSVDTARGTID------VHLDLQEPA-----VFLRQGMTVSVNI 309

Query: 416 TAKNT 420
                
Sbjct: 310 ETGRR 314



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 74/206 (35%), Gaps = 20/206 (9%)

Query: 12  NHPASLKRMTLLS--IIGIIGLITWSILL------------PIEISVSSSGEILNEDNVV 57
               S++R+ +L+  ++ + G + W  L             P+   V +SGE+ ++    
Sbjct: 2   PAVRSIRRLVILAIALLALGGWLIWRQLQGPELPAYRLEARPLVQRVVASGEVDSQSLAQ 61

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            + S  +G++    V  G  +  G  LL   D E    +   + +++ L     T   A 
Sbjct: 62  -VGSEITGVVAARHVREGDAVNAGDLLLELRDDEQRARLREAEAALQQLID--STRPQAQ 118

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             L      LE+A    + +   F  K  ++   +     + +   +     R  +  L 
Sbjct: 119 ATLREAQHNLEQASRELQRRETLFERKLLASEP-LEQARRAELTARVVRDRARFAAAALA 177

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMK 203
               E +   LR  L   + +L   +
Sbjct: 178 EGGSEEQV--LRQRLEVARANLARTR 201


>gi|222055859|ref|YP_002538221.1| efflux transporter, RND family, MFP subunit [Geobacter sp. FRC-32]
 gi|221565148|gb|ACM21120.1| efflux transporter, RND family, MFP subunit [Geobacter sp. FRC-32]
          Length = 389

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 63/186 (33%), Gaps = 7/186 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           I+V++ G +    N V +K+  +GII +     G  + +G  L T +       +   + 
Sbjct: 57  ITVNAVGNVEPF-NSVPVKAQVNGIISRVHFREGQDVQKGDLLFTIDPGTYRAALKQAEA 115

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           ++              +    +Y  L K     +EQ         +  + V     +   
Sbjct: 116 NL----ARDLALARNAEEQAGRYAALVKDGIVTQEQYDQLKTNAEAFSAAVAADRAAVEN 171

Query: 162 RSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             +++    +RS    R    L N  SL++   ++    +  +  ++    V +  L   
Sbjct: 172 ARIQLSYCYIRSPIPGRTGSLLVNVGSLVKGNDTAALVTINQISPIYVSFTVPEKQLAAI 231

Query: 220 ERIVYK 225
              V  
Sbjct: 232 NTQVAG 237


>gi|91777792|ref|YP_553000.1| secretion protein HylD [Burkholderia xenovorans LB400]
 gi|91690452|gb|ABE33650.1| ABC efflux pump, membrane fusion protein, HlyD subfamily
           [Burkholderia xenovorans LB400]
          Length = 357

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/292 (9%), Positives = 81/292 (27%), Gaps = 5/292 (1%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +      R E +    G +      +    ++ +   L     + +      L +E +  
Sbjct: 52  VATKLAGRVETIAVDEGDFVKAGQPLATMQVTVLDAQLAEAHAQHQQAINTALSIEAQVV 111

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             ++  ++ +  ++  ++  +             R    S  EL ++   ++     +  
Sbjct: 112 QRQSDKAAAEAVVSQRESELDAAQRKLARSETLSRDGASSMQELDDDRARERGAEATVRA 171

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +     A         L          ++ +  +E       + +P  G + Y +  
Sbjct: 172 ARAQVTAAQAAVDA-TRAQLVAAHSAERAALATVARVEADISDSQLTAPRDGRVQY-RIA 229

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
            +         ++ IV  S   Y+   +    +  V  G    V              + 
Sbjct: 230 EAGEVLPAGGKVLNIVDLSD-VYMTFFLPETVVGKVALGAEVRVILDAAPTYVIPATVSF 288

Query: 367 IEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +        +  + ++ + +  + V  +I       +   ++ G P      
Sbjct: 289 VASTAQFTPKTVETSSERQKLMFRVKARINRELLLQHLKLVKTGLPGVAWIR 340



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 2/135 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++   V+ G  +  G PL T +       +       +       + ++ +    +  
Sbjct: 58  GRVETIAVDEGDFVKAGQPLATMQVTVLDAQLAEAHAQHQQAINTALSIEAQVVQRQSDK 117

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E     RE +L     K     S+  +   +S  + L     R R           +
Sbjct: 118 AAAEAVVSQRESELDAAQRKL--ARSETLSRDGASSMQELDDDRARERGAEATVRAARAQ 175

Query: 185 SSLLRALLSSHQKDL 199
            +  +A + + +  L
Sbjct: 176 VTAAQAAVDATRAQL 190


>gi|85708270|ref|ZP_01039336.1| metal ion efflux membrane fusion protein family protein
           [Erythrobacter sp. NAP1]
 gi|85689804|gb|EAQ29807.1| metal ion efflux membrane fusion protein family protein
           [Erythrobacter sp. NAP1]
          Length = 383

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 56/171 (32%), Gaps = 17/171 (9%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           RI       L   +   +  +  ++ LYD              +DLE  Q       S+L
Sbjct: 116 RIESADAAGLAAQVATARARVNELSALYDR-EKRLFEANVTARQDLEAAQANLQVARSEL 174

Query: 281 TILEKTR---------EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           +  +                + SPI+G I         +Y    + + +IV ++    ++
Sbjct: 175 SRAQAASAAAGVSGDGRSLAVTSPISGQITSAPIV-LGSYVSAGEEMFQIV-NASGLQVQ 232

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
             +       ++ G  AT+ F       E++    +  I P +  +  +  
Sbjct: 233 VALPASDAARIRPGDEATLEF-----GEEREIGGRVRSITPALDPESRSAT 278


>gi|320169056|gb|EFW45955.1| myosin-9 [Capsaspora owczarzaki ATCC 30864]
          Length = 1937

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 72/205 (35%), Gaps = 17/205 (8%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +     +  I+ L+  ++ E +  +   +K   L+   ++ + +       +    ++ 
Sbjct: 1712 AEAKRRLENEIQRLQAELEDETTNAEAATDKARKLQINLDALQLEFASEQSNHRK--AEE 1769

Query: 153  FNYGISSVYRSLKMKLTRMRSIYL-----NRLDLENKSSLLRALLSSHQKDLTMM----K 203
                +    + LK +L  + +            LE +   L A +    +    +    K
Sbjct: 1770 ARAALDRQSKDLKTRLDELEAATRGKSKTQIAQLEQRVKDLEAQVEEENRQKQELQRVNK 1829

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--- 260
             L  K   +   ++++ R+   +  EL +   + K   R I+E  +E     A   K   
Sbjct: 1830 KLDRKAKDAVAQIDEERRLAESNKAELDKATSKLKTQKRAIDEAEEENQRNQAAKRKLKA 1889

Query: 261  ---EISRDLEQNQRTFADEMSKLTI 282
               E + +LE  QR      +K+  
Sbjct: 1890 EFDEQTAELEAAQREVTSLRAKVRG 1914



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 11/188 (5%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              LR   + E ++L         L+    S E  L D   K H++ ++  N  I S+ +S
Sbjct: 1150 AELRAKREAELASLK------KKLDDETASHEAALTDLRKK-HTSLAEESNAEIDSLKKS 1202

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                   +     +R  L+++   L+   +  +K     K L  + A +   LN+ +RI+
Sbjct: 1203 KAALEKNVSDATRDRDSLQSELDALKKAYAELEKK---KKALEAQLAEATGRLNEDQRII 1259

Query: 224  YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +   + ++   E  +  +++ +L    +       K     L +++     E      L
Sbjct: 1260 AELQSQNQKLTAELDSTSKNLEDLESRFSA-LEKAKKTAESSLGESKGNIEAETRAKLAL 1318

Query: 284  EKTREQKT 291
                +Q  
Sbjct: 1319 ASKLKQAE 1326



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 21/177 (11%), Positives = 59/177 (33%), Gaps = 11/177 (6%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              L+  +   + +LD   N    LEK  +  ++Q  +   +      +  +    +    
Sbjct: 1407 NRLQAELADVQVSLDAERNTRSNLEKKQKKFDQQFAEEKARGEEIARERDDAQRDAR--- 1463

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS---QNDLNQQE 220
                      I  ++ +LE     +  L  + +     +++L      +    ++L + +
Sbjct: 1464 -----DSQTKILTSQKELEAAREKISELERAKKTLSAELQDLVASKDGAGRNVHELEKSK 1518

Query: 221  RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            R + +   E +  + E ++ L+   +      +       ++ R+L        D  
Sbjct: 1519 RALEQVVEEQKTQLEELEDELQATEDAKLRLEVNLQAMKAQLDRELNAKDEQTEDAR 1575



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/160 (10%), Positives = 49/160 (30%), Gaps = 6/160 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            E    +D +   +K     ++       K+ +  L  +   LE   E    Q  +   + 
Sbjct: 1769 EARAALDRQSKDLKTRLDELEAATRGKSKTQIAQLEQRVKDLEAQVEEENRQKQELQ-RV 1827

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            +    +     ++ +    ++  +    +      L+ +   +      +Q++    + L
Sbjct: 1828 NKKLDRKAKDAVAQIDEERRLAESNKAELDKATSKLKTQKRAIDEAEEENQRNQAAKRKL 1887

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              +      +L   +R V     ++R       +  R   
Sbjct: 1888 KAEFDEQTAELEAAQREVTSLRAKVRGGGASAVSSRRAAR 1927



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 23/198 (11%), Positives = 65/198 (32%), Gaps = 21/198 (10%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            ++  +K +   +  EK  ++ L  + + L +   +    L D         +K      +
Sbjct: 960  REAQLKKIEDELTVEKDNVEKLTKERNSLNEKLTTTSASLQD-----QEDTNKHLIKQKA 1014

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
             +  ++     R++     R +LE +   L +           +++L E+   +  +   
Sbjct: 1015 KLDATITELEERLQKEEKERQELEKQKRKLES----------DVRDLKEQLNAAGGEKGD 1064

Query: 219  QERIVYKSTLELR---ENIHEQKNMLRHINELYDEANLEF---ANYLKEISRDLEQNQRT 272
                + K   EL      + E+K    ++ +   +   +       L+       + ++ 
Sbjct: 1065 LASTLGKKQAELEAINSALEEEKVQRSNVEKAKRDLQAQLEEVNEELESERAARSKAEKR 1124

Query: 273  FADEMSKLTILEKTREQK 290
              D  +    L    ++ 
Sbjct: 1125 AKDLAADYDSLRAQLDES 1142



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/137 (9%), Positives = 46/137 (33%), Gaps = 3/137 (2%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +    + +K    +       R+++E   + L    ++    L +      +    +
Sbjct: 835 EDEMRQKEQEVKKLQEKAEKEEAARIEMEKLHAKLLEEKNALATQLQLESEAAAEAEEMK 894

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---ANYLKEISRDLEQNQ 270
           N L  +   +     EL   + E++ +   ++    +   +       + ++    ++ +
Sbjct: 895 NRLAAKRAELEGIVGELEARLDEEEEIKAKLSTEKRKLEAQINEMEEKVNDLETIKQKLE 954

Query: 271 RTFADEMSKLTILEKTR 287
           +  A   ++L  +E   
Sbjct: 955 QEKAAREAQLKKIEDEL 971


>gi|317486074|ref|ZP_07944926.1| HlyD family secretion protein [Bilophila wadsworthia 3_1_6]
 gi|316922670|gb|EFV43904.1| HlyD family secretion protein [Bilophila wadsworthia 3_1_6]
          Length = 307

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 43/113 (38%), Gaps = 5/113 (4%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           + +  VV++ +  SG +K   V +   +  G PL   +D  +   +   + +++  +   
Sbjct: 40  MVQAEVVQVAARVSGEVKTVHVRDNQFVKVGDPLFDLDDRPSRVALSQAEANVRQKQAVA 99

Query: 111 DTEKSALDF-----LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
              +           N    +  +AF+  E+QLL          +++    ++
Sbjct: 100 KAARDRAGRDARLQQNAPGAISPEAFQQAEDQLLSAEADVAVAQAQLDQARLN 152



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 72/217 (33%), Gaps = 20/217 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S+  L+Q E  V +     +          R         + E     ++    L   + 
Sbjct: 81  SRVALSQAEANVRQKQAVAKAARDRAGRDARLQQNAPGAISPE---AFQQAEDQLLSAEA 137

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             A   ++L       +   + +P+ G I           +   +PL+ ++ ++    + 
Sbjct: 138 DVAVAQAQLDQARLNLDFTHVTAPVNGYITNLTV-QPGTMSTAYRPLVALI-NADSFRVD 195

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV-- 389
           A     QI+  + G  A +    Y+D      +A +E I   I++++ +   Q    V  
Sbjct: 196 AFFRETQIRDFRPGDRALITLMTYSDT---PLEATVESIGWGIARENGSTGEQLLPSVSP 252

Query: 390 ---ILKITDL-------AFSDNNIELRNGFPAEVLFT 416
               +++                IELR G  A VL  
Sbjct: 253 TFEWIRLAQRIPVRLHFDALPKGIELRAGTTASVLVR 289


>gi|293610358|ref|ZP_06692659.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|332854959|ref|ZP_08435634.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6013150]
 gi|332867142|ref|ZP_08437418.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6013113]
 gi|292827590|gb|EFF85954.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|332727708|gb|EGJ59119.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6013150]
 gi|332734178|gb|EGJ65309.1| efflux transporter, RND family, MFP subunit [Acinetobacter
           baumannii 6013113]
          Length = 496

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 58/192 (30%), Gaps = 40/192 (20%)

Query: 252 NLEFANYLKEISRDLEQNQRTFADEM-------SKLTILEKTREQKTILSPIAGTIVYNQ 304
             EF   L+   R L Q  R     +       +++    + +   T+ +P++G I   +
Sbjct: 170 QTEFLAVLRTRDRSLIQASRQRLQLLGIPQNVINQVERTHRVQSNMTLSAPVSGFIDSLE 229

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
             +        Q L+ I       ++ A V   QI  +K+G      F  Y  I      
Sbjct: 230 VRN-GMALAMGQTLVTIK-GISPIWLEASVPEAQIAGIKRGMKVEATFVAYPQI----VS 283

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF--------------- 409
             +  I P +      +      +V +++ +         L+ G                
Sbjct: 284 GKVIDILPTLDSTSRTI------KVRIELPNREGL-----LKPGMFASVKFSNNPQSNLV 332

Query: 410 -PAEVLFTAKNT 420
            P + +      
Sbjct: 333 IPEQAVIRTGTR 344


>gi|262368846|ref|ZP_06062175.1| nodulation protein [Acinetobacter johnsonii SH046]
 gi|262316524|gb|EEY97562.1| nodulation protein [Acinetobacter johnsonii SH046]
          Length = 375

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 81/230 (35%), Gaps = 14/230 (6%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F  G S    +    +  +    +        +++   +  + QK   +++   + NA  
Sbjct: 59  FQEGPSIQRTAFTGTIRAVNQSSIQAQVTATATAVSVQVGQAVQKGQVLVRLNNQDNAA- 117

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
              L Q +  +  +  +        +   R +++ +  + +E+   L +    LE  +  
Sbjct: 118 --RLAQAQANLASTQAQANLAKSMAQRKKRLLDQGFI-SKVEYEQSLVDYQAQLENVRAQ 174

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A+    + I EK     TI+SPI+G I   Q           Q L +I+       I+A
Sbjct: 175 QAN----VDIAEKADRDGTIVSPISGVITQRQV-EPGQTVSAGQTLFEII-DPSHLEIQA 228

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           K+       +  G     R         +K  A + +I PI    +  ++
Sbjct: 229 KIPSDLQAALSLGEKIEYRL----QGNPQKLTAKLTRISPIADPANRQIE 274



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 43/121 (35%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I++  +       V+ G  + +G  L+   + +    +   + ++ + +   +  KS   
Sbjct: 82  IQAQVTATATAVSVQVGQAVQKGQVLVRLNNQDNAARLAQAQANLASTQAQANLAKSMAQ 141

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                 D    +    E+ L+D+  +  +  ++  N  I+         ++ +  +   R
Sbjct: 142 RKKRLLDQGFISKVEYEQSLVDYQAQLENVRAQQANVDIAEKADRDGTIVSPISGVITQR 201

Query: 179 L 179
            
Sbjct: 202 Q 202


>gi|218290243|ref|ZP_03494397.1| efflux transporter, RND family, MFP subunit [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239718|gb|EED06909.1| efflux transporter, RND family, MFP subunit [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 356

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 82/237 (34%), Gaps = 26/237 (10%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                + +    +R +    ++L+N S  ++ +L    + +   + L + +  S      
Sbjct: 51  QRIERVTLASGTVRPVARQIVNLDNLSGPVQRVLVHVGEHVQAGQPLIQLSTAS------ 104

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            E  V  +   L +     + +L   NE        F          L   Q + A   S
Sbjct: 105 AEASVQAAESALADAESAYQRVLAQYNEAPTALKALF-------LPQLNAAQASVASARS 157

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHSKLTYIRAKVTP 336
           +L   +    Q TI + ++G ++     + +         P++++    K   I   ++ 
Sbjct: 158 QLAEAQANEAQLTITATMSGIVL---IANPNGVDADGNQTPVVEVASPEKDVVID--LSE 212

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
                VK G TAT++   Y +     F  ++  I P     + +       EV ++ 
Sbjct: 213 VDAAQVKVGMTATMQTDAYPNQT---FTGVVTSIAPYA---ELSSSGAPVVEVTVEP 263



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 43/136 (31%), Gaps = 6/136 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            L  IE    +SG +      +      SG +++  V  G  +  G PL+          
Sbjct: 49  SLQRIERVTLASGTVRPVARQIVNLDNLSGPVQRVLVHVGEHVQAGQPLIQLSTASAEAS 108

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   + ++ +        +  L   N     L+  F     QL        S  S++   
Sbjct: 109 VQAAESALADAES---AYQRVLAQYNEAPTALKALFLP---QLNAAQASVASARSQLAEA 162

Query: 156 GISSVYRSLKMKLTRM 171
             +    ++   ++ +
Sbjct: 163 QANEAQLTITATMSGI 178


>gi|57242015|ref|ZP_00369955.1| AcrA/AcrE family protein [Campylobacter upsaliensis RM3195]
 gi|57017207|gb|EAL53988.1| AcrA/AcrE family protein [Campylobacter upsaliensis RM3195]
          Length = 387

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 70/172 (40%), Gaps = 20/172 (11%)

Query: 18  KRMTLLSIIGIIGLITWSILL----------------PIEISVSSSGEILNEDNVVEIKS 61
           K +  L I  ++    W                     I  ++ + G++  ++ V ++ +
Sbjct: 4   KLIASLLICIVLCFGIWVYFYFSAEKVEYLTQKISRKNISQTIEAIGKVYAKEQV-DVGA 62

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             SG I K  V+ G ++ QG  +   +  +  + +D+ K  +++ + +++++K AL   +
Sbjct: 63  QVSGQIIKLYVDVGDRVKQGDLIAQIDKDKQQNDLDITKARLESAKANLESKKVALSIAS 122

Query: 122 NKYDVLEKAFESRE---EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            +Y   +K ++ +    E L      Y +  + V       +   + +K  +
Sbjct: 123 KQYIREQKLYDKKATSLESLETLKDNYFALKASVAALNAEVIELEITLKNAQ 174



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 83/252 (32%), Gaps = 18/252 (7%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           EK     ++     + +      KV+      V   +  ++ ++     +R+   +  + 
Sbjct: 28  EKVEYLTQKISRKNISQTIEAIGKVYAKEQVDVGAQVSGQIIKLYVDVGDRVKQGDLIAQ 87

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           +       Q DL + K        ++ +  +      K  L +    + ++  L      
Sbjct: 88  IDK--DKQQNDLDITK--------ARLESAKANLESKKVALSIASKQYIREQKLYDKKAT 137

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             E+     +    +   +        +    L   +K  +   I +P+ G I+      
Sbjct: 138 SLESLETLKDNYFALKASVAALNAEVIELEITLKNAQKDLDYTIITAPMDGVIINVAVD- 196

Query: 308 SSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                  +Q    L++I  + +   ++ ++    +  +K G    + F       EK ++
Sbjct: 197 EGQTVNANQNTPTLVRIA-NLEQMEVKMEIAEADVSKIKIG--TKLEFS-LLSNPEKTYE 252

Query: 365 AIIEKIDPIISQ 376
           A I  IDP  +Q
Sbjct: 253 AQIASIDPADTQ 264


>gi|308189138|ref|YP_003933269.1| RND efflux system, membrane-fusion protein [Pantoea vagans C9-1]
 gi|308059648|gb|ADO11820.1| Putative RND efflux system, membrane-fusion protein [Pantoea vagans
           C9-1]
          Length = 360

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/165 (10%), Positives = 61/165 (36%), Gaps = 4/165 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + +++ G ++   +V  + S   G +++     G ++  G  L   +      
Sbjct: 24  ASTADVPVWLNALGTVIPNASV-TVTSRVDGQLEQVFFTEGQKVSAGQLLAQIDPRSYQA 82

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            ++  +  +   +  + + +  L     L  +  +  +  +S+   +  + G   +  ++
Sbjct: 83  TLNQYQAELSENQALLKSAELTLTRYRKLAAQDALARQDLDSQIATVGQYRGAVAADQAQ 142

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           + +  +S  Y  +   ++    +         +SS    L++  Q
Sbjct: 143 IASAKLSIEYARITAPISGRVGLRQVDPGNMVQSSSSTGLVTITQ 187



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 33/191 (17%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE- 267
             ++Q D    +  + +   EL EN    K+    +   Y +   + A   +++   +  
Sbjct: 70  QLLAQIDPRSYQATLNQYQAELSENQALLKSAELTLT-RYRKLAAQDALARQDLDSQIAT 128

Query: 268 --QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKI-- 321
             Q +   A + +++   + + E   I +PI+G +   +     N  Q S    L+ I  
Sbjct: 129 VGQYRGAVAADQAQIASAKLSIEYARITAPISGRV-GLRQVDPGNMVQSSSSTGLVTITQ 187

Query: 322 ---------VPHSKLTYIRAKVTPKQIQHVKKGY--TATVRFPHYAD-IREKKFKAIIEK 369
                    VP S          P  +  + +G    AT+    +    +       ++ 
Sbjct: 188 MQPAAVTFSVPQSD--------IPALVSVLHQGQSLPATL----FDQDNQHPLASGEVKF 235

Query: 370 IDPIISQQDNN 380
           I   I      
Sbjct: 236 ISNQIDTATGT 246


>gi|257469189|ref|ZP_05633283.1| periplasmic component of efflux system [Fusobacterium ulcerans ATCC
           49185]
          Length = 369

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 79/215 (36%), Gaps = 17/215 (7%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            EK  +     ++ ER      LE       +      +    ++      N +KE++ +
Sbjct: 87  VEKGQI-LMTFDETERNNTMRKLERERLALAKLKRDIKVERELNKIGGSSDNAVKELNEE 145

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           + + +    + M  L+   +      I SP++GTI    +   +       PLM+I   S
Sbjct: 146 IRKIEINIEEYMEDLSKTAER-----IESPVSGTITSLTA-QENYLVDTDSPLMEIADLS 199

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
            +  +  +V    ++ ++ G    ++   +   ++K +  ++ KI  I   + +   ++ 
Sbjct: 200 DIKIV-LEVPEYDVKDIELGQKLMIKPEVFE--KKKSYLGVVTKISRIS--KVSETTSEN 254

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             EV +K  +         +  GF    +   +  
Sbjct: 255 VLEVEVKPDEAIPY-----IVPGFKVSAVIYLEQR 284



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 71/199 (35%), Gaps = 12/199 (6%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIE---TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           + +  ++ G  + +G  L+TF++ E   T   ++ +++++  L+  I  E+  L+ +   
Sbjct: 76  VDEVFIQEGDYVEKGQILMTFDETERNNTMRKLERERLALAKLKRDIKVER-ELNKIGGS 134

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D   K       ++   + +Y    SK      S V  ++     +   +      L  
Sbjct: 135 SDNAVKELNEEIRKIEINIEEYMEDLSKTAERIESPVSGTITSLTAQENYLVDTDSPLME 194

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
            + L    +     +  +      +  + + ++ ++++       ++          +  
Sbjct: 195 IADLSDIKIVLEVPEYDVKDIELGQKLMIKPEVFEKKKSYLGVVTKISR--------ISK 246

Query: 244 INELYDEANLEFANYLKEI 262
           ++E   E  LE      E 
Sbjct: 247 VSETTSENVLEVEVKPDEA 265


>gi|225852835|ref|YP_002733068.1| HlyD family secretion protein [Brucella melitensis ATCC 23457]
 gi|256044987|ref|ZP_05447890.1| HlyD family secretion protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256113899|ref|ZP_05454692.1| HlyD family secretion protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|260565412|ref|ZP_05835896.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|265995250|ref|ZP_06107807.1| HlyD family secretion protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|225641200|gb|ACO01114.1| HlyD family secretion protein [Brucella melitensis ATCC 23457]
 gi|260151480|gb|EEW86574.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|262766363|gb|EEZ12152.1| HlyD family secretion protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|326409376|gb|ADZ66441.1| HlyD family secretion protein [Brucella melitensis M28]
 gi|326539083|gb|ADZ87298.1| HlyD family secretion protein [Brucella melitensis M5-90]
          Length = 355

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 152


>gi|104782106|ref|YP_608604.1| macrolide efflux protein MacA [Pseudomonas entomophila L48]
 gi|95111093|emb|CAK15813.1| macrolide efflux protein MacA [Pseudomonas entomophila L48]
          Length = 384

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 63/223 (28%), Gaps = 22/223 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLKEISRDLE 267
            V +N L Q E    K   E R    + K   R     E+  E              + E
Sbjct: 94  LVLRNTLRQAEVDAEKLQAERRSTQAKLKQAKRVYERYEVLQEDESISRQDFDNAESEYE 153

Query: 268 QNQRTFADEMSKLTILEKTRE-------QKTILSPIAGTIVYNQSFSSSNYAQQSQ--PL 318
             Q       +++   +   +          I++PI G +V             +Q  P+
Sbjct: 154 VQQANLLSLDAQIKSAQVQVDTARVNLGYTRIVAPINGHVVGV-VTQEGQTVIANQLAPI 212

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-----DPI 373
           +  +       I+A+V+   + H+  G                K +              
Sbjct: 213 LLKLADLDTMTIKAQVSEADVIHISPGQQVYFTILGDDQRYYAKLRGTEPAPQNYLESSD 272

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            S   +   +  +Y  + ++ +         LR    A+V   
Sbjct: 273 KSSGASRQASAVFYNALFEVPNPE-----HRLRISMTAQVRIV 310



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 57/138 (41%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     V ++ +  SG +K  +V+ G ++ +G  L   + +   + +   
Sbjct: 45  IENAVLATGTLEGIRQV-DVGAQVSGQLKSLKVKLGDKVTEGQWLAEIDPLVLRNTLRQA 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +V  + L+    + ++ L      Y+  E   E       DF      +  +V    + S
Sbjct: 104 EVDAEKLQAERRSTQAKLKQAKRVYERYEVLQEDESISRQDFDNA--ESEYEVQQANLLS 161

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K    ++ +  +N
Sbjct: 162 LDAQIKSAQVQVDTARVN 179


>gi|90411229|ref|ZP_01219241.1| putative secretion protein [Photobacterium profundum 3TCK]
 gi|90327758|gb|EAS44089.1| putative secretion protein [Photobacterium profundum 3TCK]
          Length = 355

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 83/269 (30%), Gaps = 32/269 (11%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +     +LK    +  ++Y      + K +  +A  ++ + +   +K L  +  VS + 
Sbjct: 84  AVKKAEVALKQAHEQESALYAKVSSGKAKVATTQASYNNARSEYQRVKKLARQKLVSASM 143

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L+        +   L     +  ++   +     E+++                      
Sbjct: 144 LDNALANNSVALSNLHAAQQDLLSLQVQLGITPGESSM-------------------VHA 184

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             + L           + +P  G I   Q     + A  + PL+  +P +   ++ A   
Sbjct: 185 AENALEQANLDLSHTQVNAPSDGIITNLQL-EVGSTASTNMPLLTFIPTNS-LWVTADFR 242

Query: 336 PKQIQHVKKGYTATVRFPHYA---------DIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
            K I  + +  TA V F  +                  A       + + + NN   ++ 
Sbjct: 243 EKAIALMNEHSTALVTFDAFPGETFAFNIQSRDFGVAAAQQSPNGKLTAVETNNRWVRDA 302

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLF 415
             V + ++        + +  G  A V+ 
Sbjct: 303 QRVRVNLSTDEPLPKQLFV--GSRATVVI 329


>gi|83644313|ref|YP_432748.1| membrane-fusion protein [Hahella chejuensis KCTC 2396]
 gi|83632356|gb|ABC28323.1| Membrane-fusion protein [Hahella chejuensis KCTC 2396]
          Length = 402

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 7/135 (5%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-LEFANYLKEISRDLEQN 269
           V   D   Q RI   +  E +  + E++  +R   + +++   ++ A+ L      L   
Sbjct: 99  VDPVDYQVQLRIAEGAVTEAKLALAEEEARVRQAKKDWEKIGGVKNASDLALRKPQLAAA 158

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q      +++LT      E+  I +P AG ++  Q     +       L +I       Y
Sbjct: 159 QARVQTAIAQLTQARINLERTEIKAPYAGRVLKKQVD-LGSVVSPQTTLAEIYATD---Y 214

Query: 330 IRAKVT--PKQIQHV 342
           +  ++      +  +
Sbjct: 215 VEVRLPLNNTDLGFI 229



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 62/181 (34%), Gaps = 10/181 (5%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKF--QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           G +        + +  SG +      + +G    +G  LL  + ++    + + + ++  
Sbjct: 59  GIVQPRTQSAIV-AQVSGQVMDVSPNLRDGGFFAKGEVLLKVDPVDYQVQLRIAEGAVTE 117

Query: 106 LRCHIDTEKSALDFLNNKYDVL-----EKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            +  +  E++ +      ++ +           R+ QL     +  +  +++    I+  
Sbjct: 118 AKLALAEEEARVRQAKKDWEKIGGVKNASDLALRKPQLAAAQARVQTAIAQLTQARINLE 177

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              +K        +   ++DL +  S    L   +  D   ++       +   DL +Q 
Sbjct: 178 RTEIKAPYAGR--VLKKQVDLGSVVSPQTTLAEIYATDYVEVRLPLNNTDLGFIDLPEQR 235

Query: 221 R 221
           R
Sbjct: 236 R 236


>gi|325924265|ref|ZP_08185815.1| RND family efflux transporter, MFP subunit [Xanthomonas gardneri
           ATCC 19865]
 gi|325545257|gb|EGD16561.1| RND family efflux transporter, MFP subunit [Xanthomonas gardneri
           ATCC 19865]
          Length = 413

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/135 (10%), Positives = 43/135 (31%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +     G +     + G ++ +G  L   +        D    + 
Sbjct: 64  ASALGTVTA-LNTVTVSPQVGGQLMSLNFQEGQEVKKGQLLAQIDPRSLQASYDQSLAAK 122

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +      N+      V     +++  Q+  +     +  +++    +   
Sbjct: 123 RQNQALLATARVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVSANDAQMRAAQVQLQ 182

Query: 161 YRSLKMKLTRMRSIY 175
           +  +   +  +  I 
Sbjct: 183 FTRILAPIDGIAGIR 197


>gi|326402783|ref|YP_004282864.1| HlyD family secretion protein [Acidiphilium multivorum AIU301]
 gi|325049644|dbj|BAJ79982.1| HlyD family secretion protein [Acidiphilium multivorum AIU301]
          Length = 348

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/139 (10%), Positives = 36/139 (25%), Gaps = 8/139 (5%)

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                    I +P++G +      +  N       +M +V      ++ A     ++  +
Sbjct: 209 ARLELGYTEIRAPVSGWVAKKTVRT-GNVVGAGTAMMAVV--GDHVWVTANYKETELGAI 265

Query: 343 KKGYTATVRFP-----HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           + G +  V         +                 + ++       +    V ++I    
Sbjct: 266 RPGQSVNVYVDAVPGVAFHARVASIQHGTGSIFSLLPAENATGNYVKVVQRVPVRIEFDD 325

Query: 398 FSDNNIELRNGFPAEVLFT 416
              +   L  G   E    
Sbjct: 326 SRISRYLLAPGMSVEPYIR 344



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 12/115 (10%), Positives = 39/115 (33%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           + ++ +I    SG +    V++   +++G  L+  +D      +D  +      +  +  
Sbjct: 63  DGSIHQIAPRISGQVVAVLVKDNQHVVRGQLLVRLDDGTQKVALDRAEAERAQAQAQLGA 122

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            ++ L       +V +      +     +        +      I++  R+   +
Sbjct: 123 READLAEARANVEVADATLFRAKRDEARYAKVDPRAVTPTTRDAIAADLRAAVAR 177


>gi|323141743|ref|ZP_08076615.1| efflux transporter, RND family, MFP subunit [Phascolarctobacterium
           sp. YIT 12067]
 gi|322413780|gb|EFY04627.1| efflux transporter, RND family, MFP subunit [Phascolarctobacterium
           sp. YIT 12067]
          Length = 419

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/247 (10%), Positives = 82/247 (33%), Gaps = 32/247 (12%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +  +   + + ++         +     +      +   A     Q +    + L+ + A
Sbjct: 109 QHLDDARAEMLKAKARYAEAGANAATTDVSYSTSLTRYEADYKLAQVNAERYRKLYAQGA 168

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VS+++L+  E+ +     +    + +Q++     +++Y +                   +
Sbjct: 169 VSKSELDSMEQTLANKKAQYDA-LAQQESYDGTPSQVYRQ-------------------E 208

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           +  A    +  I +         +P AG I Y +      YA     L+ ++       +
Sbjct: 209 QIAARREQEYIIAQNKYHDLIFKAPRAGIITY-RDAEVGGYAPAGSRLLTLL-DDSGFTV 266

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              +T  +   V  G    ++     +I     +  +  + P+ S++ N       + + 
Sbjct: 267 DCDITEAEAASVTVGTQVELKLEAIGEIC----RGTVVYVSPVRSRETNK------FTLR 316

Query: 391 LKITDLA 397
           +++ +  
Sbjct: 317 IRLDEPG 323



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/142 (11%), Positives = 50/142 (35%), Gaps = 7/142 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+ +  V+ GS++  G  LL    ++  D    + +  K          +  D ++   
Sbjct: 87  GIVDEINVDLGSKVQAGDILL----VQHLDDARAEMLKAKARYAEAGANAATTD-VSYST 141

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL--DLE 182
            +     + +  Q+     +       V    + S+ ++L  K  +  ++          
Sbjct: 142 SLTRYEADYKLAQVNAERYRKLYAQGAVSKSELDSMEQTLANKKAQYDALAQQESYDGTP 201

Query: 183 NKSSLLRALLSSHQKDLTMMKN 204
           ++      + +  +++  + +N
Sbjct: 202 SQVYRQEQIAARREQEYIIAQN 223


>gi|260772694|ref|ZP_05881610.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           metschnikovii CIP 69.14]
 gi|260611833|gb|EEX37036.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           metschnikovii CIP 69.14]
          Length = 344

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 23/192 (11%)

Query: 238 KNMLRHINELYDEANLEFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQKT 291
           +  L+ +  + + AN+E   Y +          +L +++       + +        QKT
Sbjct: 106 RAELKRLQAVEELANIELTRYQRLFREKNVSESELRRSESEAKQASAAVESQRARIAQKT 165

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           IL+P  G I   +  S          ++ +       Y+   +  +Q+ +++ G +  V 
Sbjct: 166 ILAPFDG-IAGLRQVSLGQLLSPGSVVVSLQ-SFAPIYLNFTLPEQQLANIRLGESVQVN 223

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
                 +  + F   I  I P + +   +++ Q               + ++ LR G  A
Sbjct: 224 V---DSVAGRVFTGKITAIAPSVREASRSIEVQ-----------ATLDNQDLALRPGMFA 269

Query: 412 EVLFTAKN-TTL 422
            V        ++
Sbjct: 270 RVQLDTGKPRSV 281



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 4/106 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGII      NGS I +GT L+T +D      +      ++ +    + E +    L  +
Sbjct: 77  SGIINGIHFANGSNIKKGTLLVTLDDSVDRAELK----RLQAVEELANIELTRYQRLFRE 132

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            +V E      E +         S  +++    I + +  +     
Sbjct: 133 KNVSESELRRSESEAKQASAAVESQRARIAQKTILAPFDGIAGLRQ 178


>gi|218508886|ref|ZP_03506764.1| putative efflux transporter protein [Rhizobium etli Brasil 5]
          Length = 276

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 53/158 (33%), Gaps = 13/158 (8%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
            SG ++  D  V        I+   +VE G ++  G  L+  +D      +   ++S + 
Sbjct: 1   GSGYVVAPDTAVVFSKYEGRIVA-VEVEEGDKVAVGQVLVRLDDAGARFALRGAEISWRA 59

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
               +     AL    +    +E+            L    +  ++      ++   +  
Sbjct: 60  AELVLAARNIALAQARSSLTRIER------------LAGRDAMSAQALEEAKTAFDTAEN 107

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                 + +   RLD++     + AL+ +     T+ +
Sbjct: 108 GAEQARQDLEKARLDIDRAREQVEALVLTAPISGTVTR 145



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 65/216 (30%), Gaps = 23/216 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKN--MLRHINELYDEANLEFANYLKEISRDLEQN 269
           ++      E ++    + L +          L   + +  +A  E            EQ 
Sbjct: 53  AEISWRAAELVLAARNIALAQARSSLTRIERLAGRDAMSAQALEEAKTAFDTAENGAEQA 112

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY------AQQSQPLMKIVP 323
           ++        +    +  E   + +PI+GT+    +             ++++ L+ I  
Sbjct: 113 RQDLEKARLDIDRAREQVEALVLTAPISGTVTRLDAHVGDTVLSREDSVRENESLLAIA- 171

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            +    I A V    I  ++ G         + D     F   + KI P+IS++      
Sbjct: 172 DTASLVIDADVAETNIALMRPGLAGEAVLDGFPDQ---PFAVEVVKIAPVISREKGTATL 228

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                       L+F+     +R    A +      
Sbjct: 229 -----------RLSFTSPPSGIRPAMAARIRLVVGE 253


>gi|218691769|ref|YP_002399981.1| putative HlyD family secretion protein [Escherichia coli ED1a]
 gi|218429333|emb|CAR10147.1| putative HlyD family secretion protein [Escherichia coli ED1a]
          Length = 355

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 44/381 (11%), Positives = 110/381 (28%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  T S+      +  
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRH--TRSRSLAQWGAIS 149

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 150 AQQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAVPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|152969468|ref|YP_001334577.1| macrolide transporter subunit MacA [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238893940|ref|YP_002918674.1| macrolide transporter subunit MacA [Klebsiella pneumoniae
           NTUH-K2044]
 gi|262041023|ref|ZP_06014242.1| macrolide efflux protein MacA [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|329998491|ref|ZP_08303128.1| macrolide-specific efflux protein MacA [Klebsiella sp. MS 92-3]
 gi|150954317|gb|ABR76347.1| accessory protein to ABC-type macrolide transport protein MacB
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238546256|dbj|BAH62607.1| ABC-type macrolide transport system accessory component [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|259041581|gb|EEW42633.1| macrolide efflux protein MacA [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328538681|gb|EGF64777.1| macrolide-specific efflux protein MacA [Klebsiella sp. MS 92-3]
          Length = 371

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 81/229 (35%), Gaps = 41/229 (17%)

Query: 17  LKRMTLLSIIGIIGLITWSI---LLPI-------------EISVSSSGEILNEDNVVEIK 60
            + +  L  I ++GL  W       P+             + SV ++G++     V ++ 
Sbjct: 7   RRTVWWLLAIVVLGLAIWGWRILNAPLPNYQTLVVRKGDLQQSVLATGKLDALRKV-DVG 65

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +  SG +K   V  G ++ +   L   +  +  + I   + ++  LR  ++  ++     
Sbjct: 66  AQVSGQLKTLHVNIGDKVKKDQLLGVIDPEQAQNQIKEVEATLMELRAQLNQARA----- 120

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
                      ES+  Q+     +  +    V    + +    L +K  ++ +I      
Sbjct: 121 -----------ESKLAQVTLARQQQLAQRQLVSRQDLDTAATDLAVKQAQIGTI------ 163

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTL 228
            E +    +A L + + +L   + L      V+Q    Q + ++     
Sbjct: 164 -EAQIKRNQATLDTAKTNLDYTRILAPMAGEVTQITTLQGQTVIAAQQA 211



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 69/222 (31%), Gaps = 30/222 (13%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQN 269
           +QN + + E  + +   +L +   E K     +      A  +      L   + DL   
Sbjct: 97  AQNQIKEVEATLMELRAQLNQARAESKLAQVTLARQQQLAQRQLVSRQDLDTAATDLAVK 156

Query: 270 QRTFADEMSK-------LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-----P 317
           Q       ++       L   +   +   IL+P+AG +    +          Q      
Sbjct: 157 QAQIGTIEAQIKRNQATLDTAKTNLDYTRILAPMAGEVTQITTLQGQTVIAAQQAPNILT 216

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           L  +        ++A+V+   + H++ G  A   F    D    +++  ++     I   
Sbjct: 217 LADL----STMLVKAQVSEADVIHLRPGQKAW--FTVLGDPLT-RYEGKLK----DILPT 265

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              +    +Y    ++ +         LR    A+V      
Sbjct: 266 PEKVNDAIFYYARFEVPNPQGI-----LRLDMTAQVHIQLAE 302


>gi|66046609|ref|YP_236450.1| secretion protein HlyD [Pseudomonas syringae pv. syringae B728a]
 gi|63257316|gb|AAY38412.1| Secretion protein HlyD [Pseudomonas syringae pv. syringae B728a]
          Length = 294

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 70/224 (31%), Gaps = 21/224 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q+      R    +  E +E   + +   +         NL     L+E      +  
Sbjct: 78  IDQDRFRLALRQAQATVAERQETWEQARRENKR---NRGLGNLVAREQLEESQSREARAL 134

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +    +   +   ++  I SP+ G  + +++     +     P++ +V  S   +I
Sbjct: 135 SALGESKVAVDAAQLNLDRSVIRSPVDGY-LNDRAPREHEFVTAGHPVLSVV-DSTSFHI 192

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQDN 379
                  ++  +  G    +R    +        +I+  I+           P ++   +
Sbjct: 193 DGYFEETKLDGIHVGQGVDIRVIGDSARLTGHVVSIVAGIEDRDRSSGSNLLPNVNPAFS 252

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT--AKNTT 421
            ++  +   V +   D+     +  +  G  A V      +  +
Sbjct: 253 WVRLAQRIPVRIAFDDV---PADFRMIAGRTATVSIIDDTQERS 293



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           +VV+I    SG+I+K +V +   + +G  L T +       +   + ++   +   +  +
Sbjct: 46  DVVQIAPDVSGLIQKVEVTDNQPVHKGQILFTIDQDRFRLALRQAQATVAERQETWEQAR 105

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                     +++ +      EQL +   +     S +    ++     L +  + +RS
Sbjct: 106 RENKRNRGLGNLVAR------EQLEESQSREARALSALGESKVAVDAAQLNLDRSVIRS 158


>gi|126175929|ref|YP_001052078.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS155]
 gi|125999134|gb|ABN63209.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS155]
          Length = 410

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 65/202 (32%), Gaps = 26/202 (12%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++  +   E+   K+  +L +           +  + D    E     K+   +L +N 
Sbjct: 116 VTKGQVIA-EQDNTKAKADLDKAKSTLALAKTKLERIEDLLIKEPFALAKQDVDELRENV 174

Query: 271 RTF-ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               AD   K   +        I +P  G  + + S S  +       L+ +   +    
Sbjct: 175 NLADADFRQKQATMNDYL----IKAPFDGQ-LTSFSQSIGSQIGAGTALVTLYSLNP--- 226

Query: 330 IRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
           +  +  ++       +KG    V    Y +   K FK ++  + P + +           
Sbjct: 227 VEVRYAISQNDFGKAQKGQKVNVTVEAYGN---KVFKGLVNYVAPAVDESSG-------- 275

Query: 388 EVILKITDLAFSDNNIELRNGF 409
              +++   A  +   +L  G 
Sbjct: 276 --RVEV-HAALDNPEFKLAPGM 294



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 44/114 (38%), Gaps = 18/114 (15%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--------- 117
           I      NG ++ +G  +   ++ +    +D  K ++   +  ++  +  L         
Sbjct: 105 ISAIHFSNGDKVTKGQVIAEQDNTKAKADLDKAKSTLALAKTKLERIEDLLIKEPFALAK 164

Query: 118 ---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
              D L    ++ +  F  ++  + D+L K        F+  ++S  +S+  ++
Sbjct: 165 QDVDELRENVNLADADFRQKQATMNDYLIKAP------FDGQLTSFSQSIGSQI 212


>gi|329903606|ref|ZP_08273564.1| putative RND efflux membrane fusion protein [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327548266|gb|EGF32961.1| putative RND efflux membrane fusion protein [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 346

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/259 (10%), Positives = 79/259 (30%), Gaps = 15/259 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           N V+++     I+++  V+ G ++  G  L+T +       +D     +   R  +   +
Sbjct: 29  NTVDVRPQVQNIVREIHVQEGQEVRAGQLLITLDQRNELSGVDKTLAQVARDRADLSDAE 88

Query: 115 SALD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           + L     L +K  + +   ++   ++        +  + V +  I+  Y  ++  ++  
Sbjct: 89  ATLSRNLELLSKKFIAQAVVDTARSKVDALRSTLAADQAAVKSSRIALDYNLVRASISGR 148

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
             +         + + L  L  S    + +   L       + +L        +    + 
Sbjct: 149 IGLINVHPGSLAQPAALPMLTISQLDPIAVSFTL------PERELANLRATYPQGDAPVM 202

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR------TFADEMSKLTILEK 285
             +     +   +  + + A+ +      +        +       +       L     
Sbjct: 203 AQVAGAGELTGKLIFIDNAADAQTGTIRMKARFSNADRRMWPGTFVSVRLVSRTLPGAIV 262

Query: 286 TREQKTILSPIAGTIVYNQ 304
              Q  +  P+   I   Q
Sbjct: 263 VPAQAIVTGPVDKFIYVMQ 281


>gi|237728816|ref|ZP_04559297.1| ABC-2:ABC transporter [Citrobacter sp. 30_2]
 gi|226909438|gb|EEH95356.1| ABC-2:ABC transporter [Citrobacter sp. 30_2]
          Length = 355

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 50/409 (12%), Positives = 119/409 (29%), Gaps = 80/409 (19%)

Query: 18  KRMTLLS--IIGIIGLITWSILLP--IEISVSSS-GEILNEDNVVEIKSPFSGIIKKFQV 72
           + M      I+ ++  I W +L P  I    ++S G I   +  V+I +  +G I    V
Sbjct: 6   RHMMWWVAGILVVVAAIAWWMLRPAGIPGGFAASNGRIEATE--VDIATKIAGRIDTILV 63

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  + QG  L   +     +        IK     +   ++ L+   ++    +   +
Sbjct: 64  SEGQFVRQGEVLAKMDTRVLQEQRLEAVAQIKEAESAVAAARALLEQRQSEMRAAQSVVK 123

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
            RE +L     ++  + S      +S           ++                 +A +
Sbjct: 124 QREAELQSVSKRHVRSRSLSQRGAVSE---------QQLDDDRAAAESARAALESAKAQV 174

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           S+ +  +   +                      S ++ +  +   +   R I    D++ 
Sbjct: 175 SAAKAAIEAART---------------------SIIQAQTRVEAAQATERRIAADIDDSE 213

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           L+                                       +P  G + Y +        
Sbjct: 214 LK---------------------------------------APRDGRVQY-RVAEPGEVL 233

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +  
Sbjct: 234 SAGGRVLNMVDLSD-VYMTFFLPTEQAGLLKIGGEARLVLDAAPDLRIPATISFVASVAQ 292

Query: 373 IISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              +  + ++ + +  + V  +I       +   ++ G P         
Sbjct: 293 FTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGMAWVRVDE 341


>gi|237807130|ref|YP_002891570.1| efflux transporter, RND family, MFP subunit [Tolumonas auensis DSM
           9187]
 gi|237499391|gb|ACQ91984.1| efflux transporter, RND family, MFP subunit [Tolumonas auensis DSM
           9187]
          Length = 396

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 71/199 (35%), Gaps = 6/199 (3%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            V E++    GI+ K     GS +  G  L   +       +   K S +         +
Sbjct: 67  RVAEVRPQVGGIVIKRLFREGSDVKAGQTLYQIDPATYEASLASAKASWE----RAKASE 122

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +       +Y  L K      ++  D    +    + V +   +     + ++ T++++ 
Sbjct: 123 AIARLKAERYRDLSKTNGVSRQENDDAEASWKQAVADVASAKAALDTARINLEYTKVKAP 182

Query: 175 YLNRLDLE--NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              R+      + +L+ A  ++    +  +  L+   + S N+L + ++ + +  LE   
Sbjct: 183 ISGRIGKSTVTEGALVTAQQTTALTTVQQLDPLYVDVSQSSNELLKLKKALAEGQLEKAG 242

Query: 233 NIHEQKNMLRHINELYDEA 251
               +  +L      Y E+
Sbjct: 243 PQEAKVKLLLEDGSYYTES 261



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 92/305 (30%), Gaps = 45/305 (14%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           ++     +++    + +   + R++ L+  +L  ++S  R      Q    ++K LF + 
Sbjct: 29  AENNQTAMATQAPEVNVIALQPRALTLH-TELPGRTSAYRVAEVRPQVGGIVIKRLFREG 87

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--------- 260
               +D+   + +          ++   K            A L+   Y           
Sbjct: 88  ----SDVKAGQTLYQIDPATYEASLASAKASWERAKASEAIARLKAERYRDLSKTNGVSR 143

Query: 261 ----EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN-YAQQS 315
               +     +Q     A   + L       E   + +PI+G I    + +       Q 
Sbjct: 144 QENDDAEASWKQAVADVASAKAALDTARINLEYTKVKAPISGRI-GKSTVTEGALVTAQQ 202

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKG-----------YTATVRFPHYADIREKKFK 364
              +  V      Y+    +  ++  +KK              A V+          +  
Sbjct: 203 TTALTTVQQLDPLYVDVSQSSNELLKLKKALAEGQLEKAGPQEAKVKLLLEDGSYYTE-S 261

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
             ++  D  + +   +        V ++     F+++ ++L  G       T    TL  
Sbjct: 262 GKLQFSDVTVDEGTGS--------VTVR---AIFANSELQLLPGMFVRAELT--EATLKD 308

Query: 425 EIIHP 429
            ++ P
Sbjct: 309 ALLVP 313


>gi|198436429|ref|XP_002123235.1| PREDICTED: similar to nonmuscle myosin heavy chain [Ciona
            intestinalis]
          Length = 1953

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 79/224 (35%), Gaps = 23/224 (10%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                     +  ++++   +D E+     +  +   ++   +  EEQL +          
Sbjct: 909  RLAARKTELEEILQDMEARLDEEEDRNQGMMQEKKKMQTNIKDLEEQLDEEEAARQKLQL 968

Query: 151  K----------------VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            +                +     S + R  K    R+  +     D E K+ +L  L   
Sbjct: 969  EKVTLDAKCKKMDEDLNLLEDAQSKLQRERKALEERVNELEGTLGDEEEKAKMLSKLKHK 1028

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++  ++ ++   +K    + +L + +R +     ELRE I + +  L  +       + E
Sbjct: 1029 NESVISDLQERLKKEEKLRQELEKIKRQLEAEIAELREQIADLQLQLEELRVQNQRKDDE 1088

Query: 255  FA------NYLKEISRDLEQNQRTFADEMSK-LTILEKTREQKT 291
             A      +  +     L +N R   ++ ++ L  LE+ R Q+ 
Sbjct: 1089 LAALQDKFDQEQTARSQLAKNHRELQNQNAEVLEDLEQERSQRN 1132



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 71/228 (31%), Gaps = 14/228 (6%)

Query: 66   IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
             + + +   G +  +   L               +  I +L+  +  E+     L     
Sbjct: 1004 RVNELEGTLGDEEEKAKMLSKL--------KHKNESVISDLQERLKKEEKLRQELEKIKR 1055

Query: 126  VLEKAFESREEQLLDFLGKYHST--CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             LE       EQ+ D   +       ++  +  ++++      + T    +  N  +L+N
Sbjct: 1056 QLEAEIAELREQIADLQLQLEELRVQNQRKDDELAALQDKFDQEQTARSQLAKNHRELQN 1115

Query: 184  K----SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +       L    S   K     ++L E+    + +L               +   E +N
Sbjct: 1116 QNAEVLEDLEQERSQRNKAEKQKRDLSEELEALKTELEDSLDTTNAQQELKSQRERELEN 1175

Query: 240  MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            + R +       + +     ++ +  +E  Q          + LEK++
Sbjct: 1176 LKRTLESETTSFDTQLQQMRQKHNSQVETFQDELDVLKRNKSALEKSK 1223



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/207 (9%), Positives = 66/207 (31%), Gaps = 6/207 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +    +   +  +K  +  +D  + + D L       +K  ++ E  L+       ++  
Sbjct: 1639 DAVKQLKKAQAQLKEYQRDLDEVRQSRDDLLITSRESDKKAKNLEADLMQAQEDLSASER 1698

Query: 151  --KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM----KN 204
              +        +   +   L    +   ++  +E + + +          + ++    + 
Sbjct: 1699 HRRTVEAERDELQEEIAGGLKDKNAQQDDKRRIEARIADMEEENEDLASTVEILDEKNRK 1758

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            L  +N   QN+L+ +   + K          + K +   ++E+      +  N +  +  
Sbjct: 1759 LQSQNEQLQNELSSERSSLQKQESAKSHLERQNKELKLKLSEMEQTVRTKQKNAIAALEA 1818

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
             +   +     E  + +   K   +  
Sbjct: 1819 KILSTEEQLEAEAKERSAANKLLRRSE 1845



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 87/226 (38%), Gaps = 29/226 (12%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSAL-------------DFLNNKYDVLEKAFESREEQLL 139
              L D + +S KN       E+ A              D L +K D LE+   S++ +L 
Sbjct: 1452 KALADERMISAKNAEERDQAEREAREKDTKAISLSHECDELKDKIDELERVRRSQQAELD 1511

Query: 140  DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
            + +    +T           + RS ++  ++M  +     +LE++  +        + +L
Sbjct: 1512 ELVSSKDATGKSAHE-----LERSKRLLESQMEEMKTQLEELEDELQVTEDAKLRLEVNL 1566

Query: 200  TMMKNLFEKNAVSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               K  FE++  ++ +   ++ R + K   EL   + E++    +      +  ++F++ 
Sbjct: 1567 QAAKTNFERDLNAREEQAEEKRRSILKQLRELEAELEEERKQKSNAIAAKKKMEMDFSDL 1626

Query: 259  ----------LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                       ++  + L++ Q    +    L  + ++R+   I S
Sbjct: 1627 ESHIDAASKGKEDAVKQLKKAQAQLKEYQRDLDEVRQSRDDLLITS 1672


>gi|332994710|gb|AEF04765.1| RND family efflux transporter MFP subunit [Alteromonas sp. SN2]
          Length = 384

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 57/168 (33%), Gaps = 13/168 (7%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L +    + ++  +L      +K +   + E      LE +  L E+  +         
Sbjct: 116 RLVELNATLERTRADLTLAELSEKRVTVLVEE-----KLESSQRLDEVKANTAAASAQVK 170

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           +  + +  L+  + +  +L+P +GTI   + F   +       L+ +         R  V
Sbjct: 171 EIEANIDSLDVEQAKTELLAPFSGTI-SARYFDEGSVVAAGAALLSLT-SDAPLQARFAV 228

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
               +   + G    +             +A + ++ P+ ++Q   + 
Sbjct: 229 PADMVSLFRVGEKVALNVDALN------IEATVSQLSPVRNRQTRTVD 270



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 31/102 (30%), Gaps = 2/102 (1%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG +     + G  + +G  L   ++   +  +     +++  R  +    + L     
Sbjct: 84  TSGQVIAIFADEGDTVQKGDVLAKLDNDRLSARLVELNATLERTRADLTL--AELSEKRV 141

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
              V EK   S+    +       S   K     I S+    
Sbjct: 142 TVLVEEKLESSQRLDEVKANTAAASAQVKEIEANIDSLDVEQ 183


>gi|254714399|ref|ZP_05176210.1| Gram-negative bacterial RTX secretion protein D [Brucella ceti
           M644/93/1]
 gi|254717296|ref|ZP_05179107.1| Gram-negative bacterial RTX secretion protein D [Brucella ceti
           M13/05/1]
 gi|261219120|ref|ZP_05933401.1| secretion protein HlyD family protein [Brucella ceti M13/05/1]
 gi|261322181|ref|ZP_05961378.1| secretion protein HlyD family protein [Brucella ceti M644/93/1]
 gi|260924209|gb|EEX90777.1| secretion protein HlyD family protein [Brucella ceti M13/05/1]
 gi|261294871|gb|EEX98367.1| secretion protein HlyD family protein [Brucella ceti M644/93/1]
          Length = 355

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 8/151 (5%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPI------EISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           S KR  +   I ++    +  L  +      +   S +G +   +  +  KSP  G I++
Sbjct: 4   SRKRWIVAGAIVVLAAGGYYALQAMNGSGLPDGIASGNGRVEAVEIDISTKSP--GRIRE 61

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
                GS +  G  L   +  +        K  ++     IDT +S +     ++   E 
Sbjct: 62  IFANEGSFVKAGDVLARMDTDQLESQYRQAKAQLRRAEIGIDTAQSLVTQRQAEHAAAEA 121

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
               RE QL     +   +     +  +S  
Sbjct: 122 TVAQREAQLDAAQRRLTRSRQLSESRTVSQQ 152


>gi|256083350|ref|XP_002577908.1| merlin/moesin/ezrin/radixin [Schistosoma mansoni]
 gi|238663249|emb|CAZ34146.1| merlin/moesin/ezrin/radixin, putative [Schistosoma mansoni]
          Length = 543

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 74/204 (36%), Gaps = 5/204 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   KV  K  +   D E+  L       +V+EK  +  +  + +    +  T + +  
Sbjct: 300 EVQQMKVKAKERQTIRDAEREKLRAEQEAREVMEKRLQDMQRLMQENEEAFARTQTVLEQ 359

Query: 155 YG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           Y   ++ +   L+ +    + +   +  LE  +  L   +   Q+       +  K    
Sbjct: 360 YECKVNELNAQLEEEKNARKQLESLQCYLEEANRKLGLSMEERQRLAQERDEIEAKIHEQ 419

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ-NQR 271
              L ++E    +   EL       +  + H +E   E++      +  +  DL Q  Q 
Sbjct: 420 NQLLQEREEEKRQFEAELARVRAMHEADMDHYSEQKQESDECELEAVNNVDEDLRQSKQD 479

Query: 272 TFADEMSKLTILEKTREQKTILSP 295
           T  D  ++L +L +     ++ +P
Sbjct: 480 TDEDHATRLKLLRQDL--SSVRNP 501


>gi|153206726|ref|ZP_01945567.1| putative efflux transporter, RND family, MFP subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212218408|ref|YP_002305195.1| acriflavin resistance periplasmic protein [Coxiella burnetii
           CbuK_Q154]
 gi|120577089|gb|EAX33713.1| putative efflux transporter, RND family, MFP subunit [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212012670|gb|ACJ20050.1| acriflavin resistance periplasmic protein [Coxiella burnetii
           CbuK_Q154]
          Length = 377

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 43/129 (33%), Gaps = 4/129 (3%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           ++ G I    +V  I+   SG+IKK     G  +  G  L   +       +   + ++ 
Sbjct: 56  TTQGSIEASQSV-TIQPQVSGVIKKIGFMPGQLVTVGQLLFEIDPTTYQAALVKAQANLA 114

Query: 105 NLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
             +  +   +       +      V ++ ++  + QL + L       + +        Y
Sbjct: 115 KDQAQLSATQKDAKRYQSLVKGNFVSQQQYDQIKAQLDEQLSTVKLDEAAIKQSEAELAY 174

Query: 162 RSLKMKLTR 170
             +   +T 
Sbjct: 175 TQITAPITG 183


>gi|115973762|ref|XP_001181199.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 1727

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 70/194 (36%), Gaps = 9/194 (4%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTE----KSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            +    DL   ++ +   L+  I       +  L+ L        +A +  +    + L K
Sbjct: 1032 ETRYLDLEASQEKTRSRLQLRIQGLEHDLRMTLEALRATKSTDARAVDIADSVQQELLTK 1091

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             H          I  +  SL   +     +   +  LE + S L+  +   Q+ L   K+
Sbjct: 1092 RH--QVDFLQIRIHGLEESLGAAIKEKSLLETEKALLEEQVSKLKEQMERFQRKL---KS 1146

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            L +K    ++ + + E  + K+ L+  +     +   + I ++     LE     + ++ 
Sbjct: 1147 LSDKRTSQKDIVTRLETALEKAALKHTDAQRLIEEQEQAIAKMTLRHQLELKALQRTLAT 1206

Query: 265  DLEQNQRTFADEMS 278
                + RT  ++ S
Sbjct: 1207 SRASSSRTTPNQSS 1220


>gi|70728411|ref|YP_258160.1| multidrug efflux RND membrane fusion protein [Pseudomonas
           fluorescens Pf-5]
 gi|68342710|gb|AAY90316.1| multidrug efflux RND membrane fusion protein [Pseudomonas
           fluorescens Pf-5]
          Length = 383

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 6/166 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S   + + + +V  +    R N+   +  + +   +  E +    +         +  Q 
Sbjct: 93  SGQRVERGQVLVQLNDAPQRGNLVRLQGEMENAR-IRLERSRRLVSVNATSREAFDNAQT 151

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             +     L  L    EQ+TI +P AGT +  +      Y      L+ ++   K  Y+ 
Sbjct: 152 ELSTAKGALQALTAEIEQRTIRAPFAGT-LGIRKVHLGQYVNPGDVLINLI-GDKGLYVN 209

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
             V  + +  V  G T  V          +   AI+  +DP + + 
Sbjct: 210 FSVPEQALAQVTPGATLEVLLDALP---GQVLSAIVSAVDPFLDRT 252



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 45/118 (38%), Gaps = 4/118 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I    +++G ++ +G  L+   D      +   +  ++N R  ++  +     L + 
Sbjct: 83  GGRIVNLPIQSGQRVERGQVLVQLNDAPQRGNLVRLQGEMENARIRLERSRR----LVSV 138

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                +AF++ + +L    G   +  +++    I + +             Y+N  D+
Sbjct: 139 NATSREAFDNAQTELSTAKGALQALTAEIEQRTIRAPFAGTLGIRKVHLGQYVNPGDV 196


>gi|62290248|ref|YP_222041.1| HlyD family secretion protein [Brucella abortus bv. 1 str. 9-941]
 gi|82700170|ref|YP_414744.1| RTX secretion protein D [Brucella melitensis biovar Abortus 2308]
 gi|189024483|ref|YP_001935250.1| RTX secretion protein D [Brucella abortus S19]
 gi|237815756|ref|ZP_04594753.1| secretion protein HlyD family protein [Brucella abortus str. 2308
           A]
 gi|254697693|ref|ZP_05159521.1| Gram-negative bacterial RTX secretion protein D [Brucella abortus
           bv. 2 str. 86/8/59]
 gi|254708034|ref|ZP_05169862.1| Gram-negative bacterial RTX secretion protein D [Brucella
           pinnipedialis M163/99/10]
 gi|254710404|ref|ZP_05172215.1| Gram-negative bacterial RTX secretion protein D [Brucella
           pinnipedialis B2/94]
 gi|254730583|ref|ZP_05189161.1| Gram-negative bacterial RTX secretion protein D [Brucella abortus
           bv. 4 str. 292]
 gi|256031898|ref|ZP_05445512.1| Gram-negative bacterial RTX secretion protein D [Brucella
           pinnipedialis M292/94/1]
 gi|260546794|ref|ZP_05822533.1| gram-negative bacterial RTX secretion protein D [Brucella abortus
           NCTC 8038]
 gi|260758296|ref|ZP_05870644.1| secretion protein HlyD family protein [Brucella abortus bv. 4 str.
           292]
 gi|260762123|ref|ZP_05874466.1| secretion protein HlyD family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|261315530|ref|ZP_05954727.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M163/99/10]
 gi|261317969|ref|ZP_05957166.1| secretion protein HlyD family protein [Brucella pinnipedialis
           B2/94]
 gi|265988999|ref|ZP_06101556.1| HlyD family secretion protein [Brucella pinnipedialis M292/94/1]
 gi|62196380|gb|AAX74680.1| HlyD family secretion protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616271|emb|CAJ11327.1| Gram-negative bacterial RTX secretion protein D:Secretion protein
           HlyD [Brucella melitensis biovar Abortus 2308]
 gi|189020055|gb|ACD72777.1| Gram-negative bacterial RTX secretion protein D [Brucella abortus
           S19]
 gi|237789054|gb|EEP63265.1| secretion protein HlyD family protein [Brucella abortus str. 2308
           A]
 gi|260095844|gb|EEW79721.1| gram-negative bacterial RTX secretion protein D [Brucella abortus
           NCTC 8038]
 gi|260668614|gb|EEX55554.1| secretion protein HlyD family protein [Brucella abortus bv. 4 str.
           292]
 gi|260672555|gb|EEX59376.1| secretion protein HlyD family protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|261297192|gb|EEY00689.1| secretion protein HlyD family protein [Brucella pinnipedialis
           B2/94]
 gi|261304556|gb|EEY08053.1| secretion protein HlyD family protein [Brucella pinnipedialis
           M163/99/10]
 gi|264661196|gb|EEZ31457.1| HlyD family secretion protein [Brucella pinnipedialis M292/94/1]
          Length = 355

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 152


>gi|56419728|ref|YP_147046.1| chromosome segregation ATPase [Geobacillus kaustophilus HTA426]
 gi|56379570|dbj|BAD75478.1| chromosome segregation ATPase (SMC) [Geobacillus kaustophilus
           HTA426]
          Length = 1187

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 81/220 (36%), Gaps = 19/220 (8%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L+T +    +    +           + +    L+ L+ K   +++     E  +     
Sbjct: 646 LVTLDGDVVSPGGAMTGGGAAKKTASLLSRNRELETLSAKLQEMDETIARLERAVAAKRH 705

Query: 144 KY--HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT- 200
           +       +      ++++  +L+ +    R +   +  ++ + +L     ++H++++  
Sbjct: 706 ELAEQEAQADALQEEVAALREALQRQKDEQRELEWQKKRIDERLALYDEEKANHEREMAE 765

Query: 201 ----------MMKNLFEK-NAVSQ--NDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                      ++ L EK  A+    + L  Q++    +   L+  I EQK  L    E 
Sbjct: 766 LNRRLGAIDRQLEQLAEKLQAIDDDISRLQAQKQTEQTTKEALQAAITEQKIALAETKER 825

Query: 248 YDEANLEFANYLKEIS---RDLEQNQRTFADEMSKLTILE 284
              A  +   +  E++   R L++ +R  A   +++   E
Sbjct: 826 VKHARRKVEEWEAELAETIRGLKEAERERAALDAEMEAPE 865



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 67/199 (33%), Gaps = 6/199 (3%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + L    I+ LR   +  K ALD        L  A +  E Q+     +  +    +  
Sbjct: 226 EVALMVHDIEQLRGQWNELKEALDGHQRDEVALAAALQKMEAQIEQLRDQMTAIDESI-- 283

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-LFEKNAVSQ 213
            G+  V      +L ++        + +  ++  +A L      L   +  L E+    +
Sbjct: 284 DGLQQVLLLASEELEKLEGRKEVLKERKKHAARRKAQLDDITAALAAKRRRLTEQLHAER 343

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQNQ 270
            +L + E        EL+E           I E  +    ++ + + E +    +    +
Sbjct: 344 EELARLEAGAAALERELKEKQALFSAHEADIEEEIERRKGDYIDLVHEQAALKNERAHVE 403

Query: 271 RTFADEMSKLTILEKTREQ 289
           +      +K T L++   +
Sbjct: 404 QALGKLHAKRTALDEANRR 422


>gi|22124616|ref|NP_668039.1| multidrug efflux protein [Yersinia pestis KIM 10]
 gi|45440454|ref|NP_991993.1| multidrug efflux protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51594843|ref|YP_069034.1| multidrug efflux protein membrane fusion protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808976|ref|YP_652892.1| multidrug efflux protein [Yersinia pestis Antiqua]
 gi|108810769|ref|YP_646536.1| multidrug efflux protein [Yersinia pestis Nepal516]
 gi|145600547|ref|YP_001164623.1| multidrug efflux protein [Yersinia pestis Pestoides F]
 gi|153997477|ref|ZP_02022577.1| multidrug efflux protein [Yersinia pestis CA88-4125]
 gi|162421607|ref|YP_001608299.1| RND family efflux transporter MFP subunit [Yersinia pestis Angola]
 gi|165925785|ref|ZP_02221617.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936766|ref|ZP_02225333.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166010172|ref|ZP_02231070.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166214315|ref|ZP_02240350.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167399410|ref|ZP_02304934.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167420492|ref|ZP_02312245.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423223|ref|ZP_02314976.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467382|ref|ZP_02332086.1| efflux transporter, RND family, MFP subunit [Yersinia pestis FV-1]
 gi|218930497|ref|YP_002348372.1| multidrug efflux protein [Yersinia pestis CO92]
 gi|229839133|ref|ZP_04459292.1| multidrug efflux protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229896622|ref|ZP_04511789.1| multidrug efflux protein [Yersinia pestis Pestoides A]
 gi|229899697|ref|ZP_04514838.1| multidrug efflux protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229900969|ref|ZP_04516093.1| multidrug efflux protein [Yersinia pestis Nepal516]
 gi|270489149|ref|ZP_06206223.1| efflux transporter, RND family, MFP subunit [Yersinia pestis KIM
           D27]
 gi|294505185|ref|YP_003569247.1| multidrug efflux protein [Yersinia pestis Z176003]
 gi|21957421|gb|AAM84290.1|AE013672_8 acridine efflux pump [Yersinia pestis KIM 10]
 gi|45435311|gb|AAS60870.1| multidrug efflux protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51588125|emb|CAH19731.1| multidrug efflux protein, membrane fusion (MFP) family [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774417|gb|ABG16936.1| multidrug efflux protein [Yersinia pestis Nepal516]
 gi|108780889|gb|ABG14947.1| multidrug efflux protein [Yersinia pestis Antiqua]
 gi|115349108|emb|CAL22071.1| multidrug efflux protein [Yersinia pestis CO92]
 gi|145212243|gb|ABP41650.1| multidrug efflux protein [Yersinia pestis Pestoides F]
 gi|149289114|gb|EDM39194.1| multidrug efflux protein [Yersinia pestis CA88-4125]
 gi|162354422|gb|ABX88370.1| efflux transporter, RND family, MFP subunit [Yersinia pestis
           Angola]
 gi|165915415|gb|EDR34025.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922397|gb|EDR39574.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165991079|gb|EDR43380.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166204547|gb|EDR49027.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961298|gb|EDR57319.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051914|gb|EDR63322.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057393|gb|EDR67139.1| efflux transporter, RND family, MFP subunit [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229682308|gb|EEO78400.1| multidrug efflux protein [Yersinia pestis Nepal516]
 gi|229687189|gb|EEO79264.1| multidrug efflux protein [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695499|gb|EEO85546.1| multidrug efflux protein [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229700400|gb|EEO88432.1| multidrug efflux protein [Yersinia pestis Pestoides A]
 gi|262363247|gb|ACY59968.1| multidrug efflux protein [Yersinia pestis D106004]
 gi|262367178|gb|ACY63735.1| multidrug efflux protein [Yersinia pestis D182038]
 gi|270337653|gb|EFA48430.1| efflux transporter, RND family, MFP subunit [Yersinia pestis KIM
           D27]
 gi|294355644|gb|ADE65985.1| multidrug efflux protein [Yersinia pestis Z176003]
          Length = 386

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 87/263 (33%), Gaps = 15/263 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GIIKK     GS++  G  L   +        D  K +++N++  + + K        +Y
Sbjct: 66  GIIKKRLFTEGSEVTAGQVLYQIDPASYQAAYDTAKAALQNVQVSVKSAK----LKAQRY 121

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L K     ++   D    Y    + V     +     + +  T++R+    R+ + + 
Sbjct: 122 AALAKENGVSQQDADDAQTSYQQALANVAEKTAALETARINLAYTQVRAPISGRIGISSV 181

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +    AL++++Q          +   V     + Q   + K      + +      L   
Sbjct: 182 TPG--ALVTANQTTALATIRNLDPIYVDLTQSSAQLLALRKQQQAGNDTVANAPVQLTLE 239

Query: 245 NELY--DEANLEFANYLKEISRDLEQNQRTFADEMSKL-------TILEKTREQKTILSP 295
           +      E +L+      + +      +  F +   +L         +        IL+P
Sbjct: 240 DGSVYAHEGSLQLTEVAVDEATGAVTLRAKFPNPEHQLLPGMFVRASVRNGVNNTAILAP 299

Query: 296 IAGTIVYNQSFSSSNYAQQSQPL 318
             G     +  +++    Q Q +
Sbjct: 300 QQGITHDAKGNATALVVNQQQQV 322


>gi|322488094|emb|CBZ23340.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 1301

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 72/217 (33%), Gaps = 17/217 (7%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ------LLDFLG 143
            E  +     + +++  R     +K ++  L  +      A + ++ Q      LL   G
Sbjct: 193 TEAAEECKELRHALQKARETQQAQKDSMKRLEVELYHARDAQQQQQRQEVEQRMLLKAEG 252

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-- 201
                    +     ++   L      +R +     + +++ + LR   +    +     
Sbjct: 253 ADWEAQRARYEKRQDTLEAQLHQARKELREMEARVAEQDDELAALRERAAKASAETEDEY 312

Query: 202 ------MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                 M+ L +  A  +  L +++  + +    LRE    Q+  +R +    ++A    
Sbjct: 313 ADIHLRMRQLAQSMASMEVALRERDATIAEQAARLREAADRQEAEVRAVTAEREKAEAAL 372

Query: 256 ANYLKEISRDLEQNQRTF---ADEMSKLTILEKTREQ 289
           A+    + R  +  +R      +   +   L+   + 
Sbjct: 373 ASARDALQRQTDDIRRRMHRFTELQQQREALKDEVKA 409


>gi|239908918|ref|YP_002955660.1| hypothetical protein DMR_42830 [Desulfovibrio magneticus RS-1]
 gi|239798785|dbj|BAH77774.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 314

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 97/269 (36%), Gaps = 18/269 (6%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           FN  I ++   +   + R   +    + LE +      L  ++      +K L  K AV+
Sbjct: 62  FNAKILTLSGQIGQHVKRGDVLASYEIPLETRMDEKTKLSPAN------IKELEHKLAVA 115

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL--YDEANLEFANYLKEISRDLEQNQ 270
             ++++      +     + N+  Q+ +  +  E+    +        L      L    
Sbjct: 116 DKEIDRLSAKGRELEAMSQRNMTSQQAISMNAKEIEVVRKEKSAVLEQLSLARDLLTDRV 175

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               D   K   + K  +   I +P+ G +++      +      +  +  V       I
Sbjct: 176 ELAEDHFGKGVGIGKVPKDGIIKAPVDGYVMWMNPELRAGVKLAKEAELFQVGLLNPMII 235

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           RA+V   + Q +K+G  A V    +  I  KKF A + +I    +     LQ   YYE+ 
Sbjct: 236 RAQVHEIEAQKLKEGVPAVV---TFDSIPGKKFNASVSRIP--WAPMPAALQQPSYYEI- 289

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               +L   + + EL+ G  A++      
Sbjct: 290 ----ELTIPNPDAELKEGLKAQITIQPGK 314


>gi|227822522|ref|YP_002826494.1| macrolide-specific efflux protein MacA precursor [Sinorhizobium
           fredii NGR234]
 gi|227341523|gb|ACP25741.1| macrolide-specific efflux protein MacA precursor [Sinorhizobium
           fredii NGR234]
          Length = 422

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 78/211 (36%), Gaps = 19/211 (9%)

Query: 211 VSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           + Q +L   E  +     +L     NI  Q++++   +      +   A++      +++
Sbjct: 133 IDQAELANLEAQLVSKKAQLVLKEANIERQRSLVATKSVSQSTLDQAIADHTA-AQAEVQ 191

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK- 326
             +     + + L   +       I +P+AGTIV N +         +Q    IV  +  
Sbjct: 192 AIEAQIRKQKATLAGDKVDLGYTKIYAPMAGTIVANPA-KEGQTLNANQTTPTIVTIADL 250

Query: 327 -LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               ++A+V+   +  +K G  A   F        K+F   + +I P+   ++N +    
Sbjct: 251 STMTVKAQVSEADVGKLKIGMDAY--FTLLGQ-PGKRFNGKLRQIQPMPDTENNVVLYYA 307

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            ++V     +L  S           A+V F 
Sbjct: 308 LFDVPNPTGELMMS---------MSAQVFFV 329



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 56/143 (39%), Gaps = 19/143 (13%)

Query: 40  IEISVSSSGEI----LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           IE SV++ G +      +          SG +K   VE G ++     +   +     + 
Sbjct: 76  IEDSVTAVGTLDAIKSVDAGAQV-----SGQLKSLHVEIGDKVAANQLVAEIDPASIENR 130

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           I++ +  + NL   + ++K+ L        VL++A   R+  L+       ST  +    
Sbjct: 131 IEIDQAELANLEAQLVSKKAQL--------VLKEANIERQRSLVATKSVSQSTLDQAIAD 182

Query: 156 --GISSVYRSLKMKLTRMRSIYL 176
                +  ++++ ++ + ++   
Sbjct: 183 HTAAQAEVQAIEAQIRKQKATLA 205


>gi|209966541|ref|YP_002299456.1| HlyD family secretion protein [Rhodospirillum centenum SW]
 gi|209960007|gb|ACJ00644.1| HlyD family secretion protein [Rhodospirillum centenum SW]
          Length = 363

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 67/214 (31%), Gaps = 28/214 (13%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLEFANYLKE-ISRDLEQ 268
           +++  ++Q +  V     +LR+     K +     N    EA+L  A    + +   +  
Sbjct: 160 LARAAVDQAQATVAGHQADLRDAESTLKRVRSLSRNANASEADLIKAQARVDSLRAQIRA 219

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ---------SFSSSNYAQQSQPLM 319
            Q         ++   +   + TI +P +G ++              +   + +    + 
Sbjct: 220 AQAQIETAKLDVSRRAEQLSKYTIAAPFSGVVIDKNAQPGEIISPVSAGGGFTRTG--IC 277

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            IV       +   V    I  V  G         Y D R     A +  + P  ++   
Sbjct: 278 TIV-DMDSLEVEVDVNEAYIGRVVAGQRVEAVLDAYPDWR---IPARVIAVVPTANRD-- 331

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                   +  +++  + F   +  +     A+V
Sbjct: 332 --------KATIQV-RIGFDGRDPRILPDMAAKV 356



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/145 (11%), Positives = 47/145 (32%), Gaps = 10/145 (6%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            S+ +SG I        + +  +G I    VE G ++ +G  L   +       + L + 
Sbjct: 105 GSLVASGYI-VARRKATVAAEITGRIVDVLVEEGMRVEEGQVLARLDAALAEIDLSLARA 163

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           ++   +  +   ++ L    +    +     +      D +              + S+ 
Sbjct: 164 AVDQAQATVAGHQADLRDAESTLKRVRSLSRNANASEADLIKA---------QARVDSLR 214

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSS 186
             ++    ++ +  L+      + S
Sbjct: 215 AQIRAAQAQIETAKLDVSRRAEQLS 239


>gi|195383822|ref|XP_002050624.1| GJ22258 [Drosophila virilis]
 gi|194145421|gb|EDW61817.1| GJ22258 [Drosophila virilis]
          Length = 2035

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 74/235 (31%), Gaps = 25/235 (10%)

Query: 82   TPLLTFED-----IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
              L+  ++               +  +  ++  ++ EK A          L +  E+ + 
Sbjct: 1155 QTLMRIDEESATKATAQKAQRELESQLAEIQEDLEAEKVARSKAEKLRRDLSEELEALKN 1214

Query: 137  QLLD------FLGKYHSTCSKVFNYGISSVYRS-----------LKMKLTRMRSIYLNRL 179
            +LLD         +  S   +       S+                     + SI     
Sbjct: 1215 ELLDSLDTTAAQQELRSKREQELAMLKKSLEEEGVNHEGVLAEMRHKHAQELNSINDQLE 1274

Query: 180  DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +L    S+L     + + +   +         S+ + +++ +       EL+  + E + 
Sbjct: 1275 NLRKAKSVLEKAKGTLEAENADLATELRSVNSSRQENDRRRKQAESQIAELQVKLAEIER 1334

Query: 240  MLRHINELYDEANLE---FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                + E   +   E     N L+E         ++ ++  S+LT  ++  E++T
Sbjct: 1335 ARSELQEKCTKLQQEAENITNQLEEAELKASAAVKSASNMESQLTEAQQLLEEET 1389



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 14/208 (6%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E    ++  +  +      +      +D  +      +KA    E QL +      +   
Sbjct: 1134 ERRIQVEEMQAQLAKREEELTQTLMRIDEESATKATAQKAQRELESQLAEIQEDLEAE-- 1191

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            KV       + R L  +L  +++  L+ LD       LR+     Q+   + K+L E+  
Sbjct: 1192 KVARSKAEKLRRDLSEELEALKNELLDSLDTTAAQQELRS--KREQELAMLKKSLEEEGV 1249

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS------- 263
              +  L +      +    + + +   +     + +       E A+   E+        
Sbjct: 1250 NHEGVLAEMRHKHAQELNSINDQLENLRKAKSVLEKAKGTLEAENADLATELRSVNSSRQ 1309

Query: 264  ---RDLEQNQRTFADEMSKLTILEKTRE 288
               R  +Q +   A+   KL  +E+ R 
Sbjct: 1310 ENDRRRKQAESQIAELQVKLAEIERARS 1337



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 79/220 (35%), Gaps = 12/220 (5%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ---LLDF 141
            L  E ++    I   +  +                L  + + L +     EE+   L   
Sbjct: 1030 LQLEKVQLDAKIKKHEEELALTDDQNQKLLKEKKLLEERANDLSQTLAEEEEKAKHLAKL 1089

Query: 142  LGKYHSTCSKVF------NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
              K+ +T +++               R+ +   T +  +     +   +   ++A L+  
Sbjct: 1090 KAKHEATIAELEERMHKDQQQRQESDRTKRKIETEVADLKEQLNERRIQVEEMQAQLAKR 1149

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            +++LT      ++ + ++    + +R +     E++E++  +K       +L  + + E 
Sbjct: 1150 EEELTQTLMRIDEESATKATAQKAQRELESQLAEIQEDLEAEKVARSKAEKLRRDLSEEL 1209

Query: 256  ANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTI 292
                 E+   L      Q   +    +L +L+K+ E++ +
Sbjct: 1210 EALKNELLDSLDTTAAQQELRSKREQELAMLKKSLEEEGV 1249



 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 73/206 (35%), Gaps = 6/206 (2%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L   +      + +L++   K+ +   +++++         D+ E+  E R +  ++ + 
Sbjct: 1086 LAKLKAKHEATIAELEERMHKDQQQRQESDRTKRKIETEVADLKEQLNERRIQ--VEEMQ 1143

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               +   +     +  +      K T  ++       L      L A   +  K   + +
Sbjct: 1144 AQLAKREEELTQTLMRIDEESATKATAQKAQRELESQLAEIQEDLEAEKVARSKAEKLRR 1203

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            +L E+    +N+L         +T   +E   +++  L  + +  +E  +     L E+ 
Sbjct: 1204 DLSEELEALKNELLD----SLDTTAAQQELRSKREQELAMLKKSLEEEGVNHEGVLAEMR 1259

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQ 289
                Q   +  D++  L   +   E+
Sbjct: 1260 HKHAQELNSINDQLENLRKAKSVLEK 1285



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 69/206 (33%), Gaps = 3/206 (1%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E        +     L+   +   + L+    K     K+  + E QL +          
Sbjct: 1331 EIERARSELQEKCTKLQQEAENITNQLEEAELKASAAVKSASNMESQLTEAQQLLEEETR 1390

Query: 151  KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +    +  +  +    +    ++      + + E K + + A +   +K      +L ++
Sbjct: 1391 QKLGLSSKLRQIESEKEALQEQLEEDEEAKRNFERKLAEVTAQMQEIKKKAEEDADLAKE 1450

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                +  LN+    + +   EL           + I    ++A +E      ++  +LE+
Sbjct: 1451 LEEGKKRLNKDIEALERQVKELMAQNDRLDKSKKKIQSELEDATIELEAQRTKVL-ELEK 1509

Query: 269  NQRTFADEMSKLTILEKTREQKTILS 294
             Q+ F   +++   + +   Q+   +
Sbjct: 1510 KQKNFDKILAEEKAISEQIAQERDTA 1535



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 80/222 (36%), Gaps = 26/222 (11%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +     D  +   +     + +    LD   +K + LE   +  + +L D      +   
Sbjct: 1527 QIAQERDTAEREAREKETKVLSVSRELDEAYDKIEDLETKRKQLQNELDDL-----ANTQ 1581

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
               +  +  + ++ +   +++  +     +LE+   L        + ++  +++ FE++ 
Sbjct: 1582 GTADKNVHELEKAKRALESQLAELKAQNEELEDDLQLTEDAKLRLEVNMQALRSQFERDL 1641

Query: 211  VSQNDLNQQER-----IVYKSTLELRENIHEQKNMLRHINELYD-----EANLEFANYLK 260
            +++ +  +++R      +     EL E   ++   +    +L       E  +E  N +K
Sbjct: 1642 LAKEEGAEEKRRGLVKQLRDLEAELDEERKQRTAAVAAKKKLEGDLKEIETTMEMHNKVK 1701

Query: 261  E--------ISRDLEQNQRTFADE---MSKLTILEKTREQKT 291
            E        +   ++   R   +      +L  L K  E+K 
Sbjct: 1702 EDALKHAKKLQAQVKDALRDAEEAKASKEELQALSKEAERKV 1743



 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 20/201 (9%), Positives = 62/201 (30%), Gaps = 24/201 (11%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL--------------------LD 140
               +  R  +   K  L+ +  + +   +  E R   L                     +
Sbjct: 965  AEAEESRSRLMARKQELEDMMQELEARIEEEEERVLALGGDKKKLELHIQDLEEQLEEEE 1024

Query: 141  FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
               +         +  I      L +   + + +   +  LE +++ L   L+  ++   
Sbjct: 1025 AARQKLQLEKVQLDAKIKKHEEELALTDDQNQKLLKEKKLLEERANDLSQTLAEEEEKAK 1084

Query: 201  MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             +  L  K+  +  +L ++     +   E      + +  +  + E  +E  ++     +
Sbjct: 1085 HLAKLKAKHEATIAELEERMHKDQQQRQESDRTKRKIETEVADLKEQLNERRIQV----E 1140

Query: 261  EISRDLEQNQRTFADEMSKLT 281
            E+   L + +      + ++ 
Sbjct: 1141 EMQAQLAKREEELTQTLMRID 1161


>gi|21227896|ref|NP_633818.1| hypothetical protein MM_1794 [Methanosarcina mazei Go1]
 gi|20906314|gb|AAM31490.1| hypothetical protein MM_1794 [Methanosarcina mazei Go1]
          Length = 851

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 72/203 (35%), Gaps = 25/203 (12%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++ E+  L   +      E+    +E + L+ L +                 R  + +
Sbjct: 279 SRMERERKGLVKTD------EELKARQERERLEGLKETQEEKISRLEQERMERERQTETE 332

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             R+  +   +++LEN+S + +  L+  +K+L     L E   VS   L ++  ++    
Sbjct: 333 RERLSRLEKEQMELENQSRVEKEKLAGLEKELQESIRLEETEKVS--RLEKEVNLLQGQE 390

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFAN-----------------YLKEISRDLEQNQ 270
              RE + + ++    + +L +      A                   L  + ++  + +
Sbjct: 391 QSRRERLAQLESERARVGKLEETEKERLARLEKERMEAERREESEKERLARLEKERMEAE 450

Query: 271 RTFADEMSKLTILEKTREQKTIL 293
           R    E  +L  LEK R +    
Sbjct: 451 RKVETEQERLARLEKERTEAEKR 473



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 71/196 (36%), Gaps = 4/196 (2%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC--HIDTEKSALDFLNNKYDVLE 128
            V+   ++         E ++ T    + ++  + +      +TE+  L  L  +   LE
Sbjct: 288 LVKTDEELKARQERERLEGLKETQEEKISRLEQERMERERQTETERERLSRLEKEQMELE 347

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                 +E+L     +   +        +S + + + +   + +S       LE++ + +
Sbjct: 348 NQSRVEKEKLAGLEKELQESIRLEETEKVSRLEKEVNLLQGQEQSRRERLAQLESERARV 407

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH-EQKNMLRHINEL 247
             L  + ++ L  ++    +    +    ++   + K  +E    +  EQ+ + R + + 
Sbjct: 408 GKLEETEKERLARLEKERMEAERREESEKERLARLEKERMEAERKVETEQERLAR-LEKE 466

Query: 248 YDEANLEFANYLKEIS 263
             EA        + ++
Sbjct: 467 RTEAEKRHETEKERLA 482


>gi|103487875|ref|YP_617436.1| secretion protein HlyD [Sphingopyxis alaskensis RB2256]
 gi|98977952|gb|ABF54103.1| Secretion protein HlyD [Sphingopyxis alaskensis RB2256]
          Length = 410

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 55/195 (28%), Gaps = 39/195 (20%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK-------TILSPIAGTIVYN 303
           A  E+ +  +    +L    R     M     +    ++        TI SPI G +   
Sbjct: 169 AQTEYLSVKRLGKPELTAAARQRLRLMGMADTVIAQVDRTGRTSGTVTIRSPIGGVVRSL 228

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
            + +      Q Q L + V      ++ A +   Q   V+ G  A      +        
Sbjct: 229 DARA-GVTLAQGQTLAE-VSGLGSVWLHAALPEAQAASVRVGQRAVATLTAFPGETFG-- 284

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF-------------- 409
              +  I P I      L       V +++      +    LR G               
Sbjct: 285 -GRVIAILPTIQSDSRTLT------VRIELP-----NRGGRLRPGMFANVTLGGDAEPAL 332

Query: 410 --PAEVLFTAKNTTL 422
             P+E +      ++
Sbjct: 333 LVPSEAVIRTGTRSI 347


>gi|297467020|ref|XP_600806.5| PREDICTED: Rho/Rac guanine nucleotide exchange factor 18 [Bos taurus]
 gi|297476680|ref|XP_002688879.1| PREDICTED: Rho guanine nucleotide exchange factor 18-like [Bos
            taurus]
 gi|296485843|gb|DAA27958.1| Rho guanine nucleotide exchange factor 18-like [Bos taurus]
          Length = 1258

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 68/190 (35%), Gaps = 4/190 (2%)

Query: 107  RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY-GISSVYRSLK 165
                  E    D   +   VLE     R + L   L       ++  +Y  I       +
Sbjct: 866  EASKVAESPGADPGPHPPAVLELELVQRIQTLSQLLLSLQVVIAQQDSYVEIQKAAIQER 925

Query: 166  MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
             K  R++S   N L  + +                +   L  +    + +  QQ R + +
Sbjct: 926  EKQFRLQSTRGNLLLEQERQRNFEKQREELAGVQKLQGQLRLEQQRWEREREQQRRELDQ 985

Query: 226  STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
            ++  L++   E   +   +N+  +E   +   Y  ++ R L + QR    E  +L +L +
Sbjct: 986  ASARLQQRESELLRLQERLNQEREELERQRQAYQHDLER-LREAQRAVERERERLEVLRR 1044

Query: 286  TREQKTILSP 295
             ++Q T  +P
Sbjct: 1045 LKKQNT--AP 1052


>gi|192360994|ref|YP_001982780.1| HlyD family secretion protein [Cellvibrio japonicus Ueda107]
 gi|190687159|gb|ACE84837.1| HlyD family secretion protein [Cellvibrio japonicus Ueda107]
          Length = 266

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/140 (11%), Positives = 57/140 (40%), Gaps = 4/140 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + I  +  G ++   +V E+++  +G +++   E G ++ QG  L   ++   T  ++  
Sbjct: 66  LNIVQTGLGTVIPAASV-EVRARVAGQLQQVLFEEGQEVQQGQLLARIDNRPFTAALEQV 124

Query: 100 KVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           K  ++  R  +   +  L     L+ +  + ++  +++   +  + G  ++    +    
Sbjct: 125 KGQLERNRALLANARRDLQRYQALHQQQSLSQQQIDAQSSLVAQYQGTVNADEGALAQAQ 184

Query: 157 ISSVYRSLKMKLTRMRSIYL 176
           +   +  +   ++    +  
Sbjct: 185 LQVEFTRITAPISGRIGLRQ 204


>gi|152999170|ref|YP_001364851.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS185]
 gi|151363788|gb|ABS06788.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS185]
          Length = 405

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 65/202 (32%), Gaps = 26/202 (12%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++  +   E+   K+  +L +           +  + D    E     K+   +L +N 
Sbjct: 111 VTKGQVIA-EQDNTKAKADLDKAKSTLALAKTKLERIEDLLIKEPFALAKQDVDELRENV 169

Query: 271 RTF-ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               AD   K   +        I +P  G  + + S S  +       L+ +   +    
Sbjct: 170 NLADADFRQKQATMNDYL----IKAPFDGQ-LTSFSQSIGSQIGAGTALVTLYSLNP--- 221

Query: 330 IRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
           +  +  ++       +KG    V    Y +   K FK ++  + P + +           
Sbjct: 222 VEVRYAISQNDFGKAQKGQKVNVTVEAYGN---KVFKGLVNYVAPAVDESSG-------- 270

Query: 388 EVILKITDLAFSDNNIELRNGF 409
              +++   A  +   +L  G 
Sbjct: 271 --RVEV-HAALDNPEFKLAPGM 289



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 44/114 (38%), Gaps = 18/114 (15%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--------- 117
           I      NG ++ +G  +   ++ +    +D  K ++   +  ++  +  L         
Sbjct: 100 ISAIHFSNGDKVTKGQVIAEQDNTKAKADLDKAKSTLALAKTKLERIEDLLIKEPFALAK 159

Query: 118 ---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
              D L    ++ +  F  ++  + D+L K        F+  ++S  +S+  ++
Sbjct: 160 QDVDELRENVNLADADFRQKQATMNDYLIKAP------FDGQLTSFSQSIGSQI 207


>gi|91774858|ref|YP_544614.1| secretion protein HlyD [Methylobacillus flagellatus KT]
 gi|91708845|gb|ABE48773.1| secretion protein HlyD [Methylobacillus flagellatus KT]
          Length = 390

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 103/298 (34%), Gaps = 19/298 (6%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             +E+  +    +L + L + H     V    I  V R         + +      +  +
Sbjct: 37  QAVEEPRDPNIVELSEDL-QRHVKIVPVGKAEIREVLRVPGSIQADDQRVARIGASVTGR 95

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLELRENIHEQKNMLR 242
            + ++A+L    K   ++  L          L     +RI   +    R  +  + +++ 
Sbjct: 96  ITDIKAVLGQDVKQGDVLAILNSTELAQSQLLYIKAAQRIDLLTKAVERARLLLEADVIG 155

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                  EA L  A      +++  Q        ++++    + R    + + I+GT++ 
Sbjct: 156 AAELQRREAELSAAQADLYTAKEQLQVLGMSEKSIAQIASSGQLRSYSNVDARISGTVIS 215

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +        Q ++ L  IV      +  A+V  +Q++ V++G    +  P  ++ +   
Sbjct: 216 RKVN-LGQVVQPAEELF-IVADLSHVWAVAEVPEQQVELVQEGEDVDIEVPALSNRK--- 270

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           F   +  +  +++             V ++       + +  L+      +L  +K T
Sbjct: 271 FTGKLIFVGDVVNPVTRT--------VTVRT---ELENRDEALKPDMLVSMLVQSKPT 317



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 2/137 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
             I   +   G I  +D  V  I +  +G I   +   G  + QG  L      E     
Sbjct: 66  AEIREVLRVPGSIQADDQRVARIGASVTGRITDIKAVLGQDVKQGDVLAILNSTEL-AQS 124

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            L  +        +         L     +     + RE +L       ++   ++   G
Sbjct: 125 QLLYIKAAQRIDLLTKAVERARLLLEADVIGAAELQRREAELSAAQADLYTAKEQLQVLG 184

Query: 157 ISSVYRSLKMKLTRMRS 173
           +S    +      ++RS
Sbjct: 185 MSEKSIAQIASSGQLRS 201


>gi|39997874|ref|NP_953825.1| RND family efflux transporter MFP subunit [Geobacter sulfurreducens
           PCA]
 gi|39984819|gb|AAR36175.1| efflux transporter, RND family, MFP subunit [Geobacter
           sulfurreducens PCA]
          Length = 372

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 67/205 (32%), Gaps = 22/205 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++  L    +       +L   + E K    ++                    D +   
Sbjct: 91  VARGALL-LRQDTSNEEAQLPGALAEAKLARANLRRSDQLLAEGII-----AQADHDSAV 144

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            T     +++  +  T  +K+I +P +G  +  +  +     ++  P++ +       ++
Sbjct: 145 ATANQAQAQVDNIRATIAKKSIRAPFSGR-LGIRQVNLGQILREGDPIVTLQ-SMDPIFV 202

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              +  +Q+  ++KG T  V             +  I  I+P +  +  N++ Q      
Sbjct: 203 DFTLPQQQLPQLRKGLTVRVTGDALPGET---IEGRITAINPEVDAESRNIKVQ------ 253

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF 415
                   ++   +LR G    V  
Sbjct: 254 -----ATVANRGEKLRPGMFVNVAV 273


>gi|332865554|ref|XP_001150406.2| PREDICTED: huntingtin-interacting protein 1-like [Pan troglodytes]
          Length = 803

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 5/192 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           LI+     I  L+  ++  K+    +  +        E+   +      +    C +   
Sbjct: 142 LIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEAELAEQQHLRQQAADDC-EFLR 200

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +  + R  +      RS+       +        L   + + +    +L  KNA    
Sbjct: 201 AELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNA---- 256

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ +Q  +  ++ ++L     E ++ L  I++       E    L+ + ++L  +QR   
Sbjct: 257 EVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQ 316

Query: 275 DEMSKLTILEKT 286
                L    ++
Sbjct: 317 VLQGSLETSAQS 328


>gi|323492026|ref|ZP_08097191.1| hypothetical protein VIBR0546_07999 [Vibrio brasiliensis LMG 20546]
 gi|323313755|gb|EGA66854.1| hypothetical protein VIBR0546_07999 [Vibrio brasiliensis LMG 20546]
          Length = 328

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 58/178 (32%), Gaps = 18/178 (10%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           ++   L  + E   +A     +   +        Q    +  + ++         ++ +P
Sbjct: 87  QRAQALLKVKEKEFKAAQSLKSKGLQGEVAFSTAQAGLVEAKAMVSNARIALRNTSVKAP 146

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
             G + +       ++     P+  ++       I A V+ + IQ ++    A++RF   
Sbjct: 147 FTGIVDHLFI-EKGDFVGVGDPVATLL-DLSQIVIEADVSERHIQALQLNQEASIRF--- 201

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             I   +    +  I  + S   N               ++  ++   ++  G  AEV
Sbjct: 202 --INGSEAVGKVRYISRVSSPATNTF-----------PIEIELANPGQKIPAGVSAEV 246


>gi|315638263|ref|ZP_07893444.1| macrolide-specific efflux protein MacA [Campylobacter upsaliensis
           JV21]
 gi|315481610|gb|EFU72233.1| macrolide-specific efflux protein MacA [Campylobacter upsaliensis
           JV21]
          Length = 387

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 70/172 (40%), Gaps = 20/172 (11%)

Query: 18  KRMTLLSIIGIIGLITWSILL----------------PIEISVSSSGEILNEDNVVEIKS 61
           K +  L I  ++    W                     I  ++ + G++  ++ V ++ +
Sbjct: 4   KLIASLLICIVLCFGIWVYFYFSAEKVEYLTQKISRKNISQTIEAVGKVYAKEQV-DVGA 62

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
             SG I K  V+ G ++ QG  +   +  +  + +D+ K  +++ + +++++K AL   +
Sbjct: 63  QVSGQIIKLYVDVGDRVKQGDLIAQIDKDKQQNDLDITKARLESAKANLESKKVALSIAS 122

Query: 122 NKYDVLEKAFESRE---EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            +Y   +K ++ +    E L      Y +  + V       +   + +K  +
Sbjct: 123 KQYIREQKLYDKKATSLESLETLKDNYFALKASVAALNAEVIELEITLKNAQ 174



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 79/238 (33%), Gaps = 18/238 (7%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           + +      KV+      V   +  ++ ++     +R+   +  + +       Q DL +
Sbjct: 42  ISQTIEAVGKVYAKEQVDVGAQVSGQIIKLYVDVGDRVKQGDLIAQIDK--DKQQNDLDI 99

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            K        ++ +  +      K  L +    + ++  L        E+     +    
Sbjct: 100 TK--------ARLESAKANLESKKVALSIASKQYIREQKLYDKKATSLESLETLKDNYFA 151

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PL 318
           +   +        +    L   +K  +   I +P+ G I+             +Q    L
Sbjct: 152 LKASVAALNAEVIELEITLKNAQKDLDYTIITAPMDGVIINVAVD-EGQTVNANQNTPTL 210

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           ++I  + +   ++ ++    +  +K G    + F       EK ++A I  IDP  +Q
Sbjct: 211 VRIA-NLEQMEVKMEIAEADVSKIKIG--TKLEFS-LLSNPEKTYEAQIASIDPADTQ 264


>gi|331649298|ref|ZP_08350384.1| putative membrane protein [Escherichia coli M605]
 gi|330909530|gb|EGH38044.1| putative membrane protein [Escherichia coli AA86]
 gi|331041796|gb|EGI13940.1| putative membrane protein [Escherichia coli M605]
          Length = 355

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGDRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|281350666|gb|EFB26250.1| hypothetical protein PANDA_004851 [Ailuropoda melanoleuca]
          Length = 1198

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/213 (10%), Positives = 74/213 (34%), Gaps = 5/213 (2%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L           + L +  +  L      E              EK  E    +  +F  
Sbjct: 942  LRELHKKHQRKAVALTRRLLDGL-AQARAEGRCRQRPGVLSGENEKEEEEEVRRYQEFQK 1000

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +   +  ++      +        L + +      + L+  ++  + L   ++++   ++
Sbjct: 1001 RQVQSLLELREAQADTEAERRLEHLRQAQQRLREIV-LDFHTTQFKRLKEMNEREKKELQ 1059

Query: 204  NLFEK---NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             + ++   N++S+    ++ +   + T   R +I E  N +R + E   + +       +
Sbjct: 1060 KILDRKRHNSISEAKTREKHKKEAELTEINRRHITESVNSIRRLEEAQKQRHERLVAGQQ 1119

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            ++ + L + +     ++++    ++ R  + I 
Sbjct: 1120 QVLQQLAEEEPKLLAQLAQECQEQRARLPQEIR 1152



 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 24/211 (11%), Positives = 57/211 (27%), Gaps = 6/211 (2%)

Query: 87   FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE-EQLLDFLGKY 145
               I+   L+D +   +  L    + + S       +   L            LD   + 
Sbjct: 828  INPIKHVSLMDQRAKQLAALIGESEAQASPETCQETQSQQLGSQLTPNPTPSPLDTSPRR 887

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN--RLDLENKSSLLRALLSSHQKDLTMMK 203
                +        S        +  + S        +L    +L++ L S  +++L  + 
Sbjct: 888  PPGPATSPTSPSLSSPGQRDDLIASLLSEVAPTPLDELRGHKALVK-LRSRQERELRELH 946

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
               ++ AV+            ++    R+             E       EF     +  
Sbjct: 947  KKHQRKAVALTRRLLDGLAQARAEGRCRQRPGVLSGENEKEEEEEVRRYQEFQKRQVQSL 1006

Query: 264  RDLEQNQR--TFADEMSKLTILEKTREQKTI 292
             +L + Q        +  L   ++   +  +
Sbjct: 1007 LELREAQADTEAERRLEHLRQAQQRLREIVL 1037


>gi|259145186|emb|CAY78450.1| Uso1p [Saccharomyces cerevisiae EC1118]
          Length = 1790

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 94/226 (41%), Gaps = 20/226 (8%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            ++ +    L  E I+        K  + +LR ++++ +   + L  +    E+   ++E 
Sbjct: 1114 EVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKER 1173

Query: 137  QLLDFLGKYHS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            Q  + + + +   T ++  N  I      L+ ++  M+S    + +L  K S + AL   
Sbjct: 1174 QYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNL--KKSEIDALNLQ 1231

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-- 252
                   +K L +KN  ++  L +  + V   T++++E   E     + ++EL D+    
Sbjct: 1232 -------IKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKAS 1284

Query: 253  -------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                   LE     ++I  +L+        ++ K+T L K +E+  
Sbjct: 1285 EDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSE 1330



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 11/203 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            ++    D  +  I  L+  ++T  +A D   NK   L K  E  E +L  +    +   +
Sbjct: 1044 KSDSSKDEYESQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELET 1103

Query: 151  KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH---QKDLTMMKNL 205
            K+      +  V  + +        +     + + + + LRA L S     +DL      
Sbjct: 1104 KLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKK 1163

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +E+   ++      ER   +   +L + I   +     I +  DE   E           
Sbjct: 1164 YEEQIANK------ERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQ 1217

Query: 266  LEQNQRTFADEMSKLTILEKTRE 288
                +        ++  L+K  E
Sbjct: 1218 SNLKKSEIDALNLQIKELKKKNE 1240


>gi|256270849|gb|EEU05990.1| Uso1p [Saccharomyces cerevisiae JAY291]
          Length = 1790

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 94/226 (41%), Gaps = 20/226 (8%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            ++ +    L  E I+        K  + +LR ++++ +   + L  +    E+   ++E 
Sbjct: 1114 EVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKER 1173

Query: 137  QLLDFLGKYHS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            Q  + + + +   T ++  N  I      L+ ++  M+S    + +L  K S + AL   
Sbjct: 1174 QYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNL--KKSEIDALNLQ 1231

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-- 252
                   +K L +KN  ++  L +  + V   T++++E   E     + ++EL D+    
Sbjct: 1232 -------IKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKAS 1284

Query: 253  -------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                   LE     ++I  +L+        ++ K+T L K +E+  
Sbjct: 1285 EDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSE 1330



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 11/203 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            ++    D  +  I  L+  ++T  +A D   NK   L K  E  E +L  +    +   +
Sbjct: 1044 KSDSSKDEYESQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELET 1103

Query: 151  KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH---QKDLTMMKNL 205
            K+      +  V  + +        +     + + + + LRA L S     +DL      
Sbjct: 1104 KLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKK 1163

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +E+   ++      ER   +   +L + I   +     I +  DE   E           
Sbjct: 1164 YEEQIANK------ERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQ 1217

Query: 266  LEQNQRTFADEMSKLTILEKTRE 288
                +        ++  L+K  E
Sbjct: 1218 SNLKKSEIDALNLQIKELKKKNE 1240


>gi|226939157|ref|YP_002794228.1| secretion protein HlyD [Laribacter hongkongensis HLHK9]
 gi|226714081|gb|ACO73219.1| secretion protein HlyD [Laribacter hongkongensis HLHK9]
          Length = 406

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 66/233 (28%), Gaps = 34/233 (14%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLR---------HINELYDEANLEFANYLKEI 262
            QN L   E  +     +L           +           +    EA       L   
Sbjct: 100 QQNTLLDAEAQLAAYQAQLAGKTATLAKARQDFVRQETMLKDDATSREAFDAARASLDSA 159

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           S D+ Q +        K++         TI++PI G +V             +Q    ++
Sbjct: 160 SADVGQLKAQIEQARIKVSTARLNLGYTTIVAPIDGVVVSLPV-EEGQTVNAAQTTPTLI 218

Query: 323 PHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-------- 372
             +      ++A+++   +  +K G           D R +     +  IDP        
Sbjct: 219 KLAQLDTMTVKAEISEGDVPRIKPGLPVYFTILGAPDTRYRT---TLRSIDPGPVALSDD 275

Query: 373 ------IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   S   +   T  YY  ++ + +        +LR    A+V      
Sbjct: 276 TSTTGSSSSSGSSAGSTAIYYYGLMDVDNPHR-----QLRIDMTAQVSIVLAE 323



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 46/135 (34%), Gaps = 7/135 (5%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +E +V ++G I     V  + +  SG IKK  V  G  +  G  +   +     + + 
Sbjct: 47  GNLEDTVLATGIIKAYKQV-SVGAQVSGQIKKLHVGLGQAVKAGDLVAEIDPRTQQNTLL 105

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  +   +  +  + + L      +   E   +       D   +     ++      
Sbjct: 106 DAEAQLAAYQAQLAGKTATLAKARQDFVRQETMLKD------DATSREAFDAARASLDSA 159

Query: 158 SSVYRSLKMKLTRMR 172
           S+    LK ++ + R
Sbjct: 160 SADVGQLKAQIEQAR 174


>gi|190405068|gb|EDV08335.1| intracellular protein transport protein USO1 [Saccharomyces
            cerevisiae RM11-1a]
          Length = 1790

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 94/226 (41%), Gaps = 20/226 (8%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            ++ +    L  E I+        K  + +LR ++++ +   + L  +    E+   ++E 
Sbjct: 1114 EVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKER 1173

Query: 137  QLLDFLGKYHS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            Q  + + + +   T ++  N  I      L+ ++  M+S    + +L  K S + AL   
Sbjct: 1174 QYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNL--KKSEIDALNLQ 1231

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-- 252
                   +K L +KN  ++  L +  + V   T++++E   E     + ++EL D+    
Sbjct: 1232 -------IKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKAS 1284

Query: 253  -------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                   LE     ++I  +L+        ++ K+T L K +E+  
Sbjct: 1285 EDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSE 1330



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 11/203 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            ++    D  +  I  L+  ++T  +A D   NK   L K  E  E +L  +    +   +
Sbjct: 1044 KSDSSKDEYESQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELET 1103

Query: 151  KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH---QKDLTMMKNL 205
            K+      +  V  + +        +     + + + + LRA L S     +DL      
Sbjct: 1104 KLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKK 1163

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +E+   ++      ER   +   +L + I   +     I +  DE   E           
Sbjct: 1164 YEEQIANK------ERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQ 1217

Query: 266  LEQNQRTFADEMSKLTILEKTRE 288
                +        ++  L+K  E
Sbjct: 1218 SNLKKSEIDALNLQIKELKKKNE 1240


>gi|6320145|ref|NP_010225.1| Uso1p [Saccharomyces cerevisiae S288c]
 gi|56757595|sp|P25386|USO1_YEAST RecName: Full=Intracellular protein transport protein USO1;
            Short=Int-1
 gi|1431059|emb|CAA98621.1| USO1 [Saccharomyces cerevisiae]
 gi|285810974|tpg|DAA11798.1| TPA: Uso1p [Saccharomyces cerevisiae S288c]
          Length = 1790

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 94/226 (41%), Gaps = 20/226 (8%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            ++ +    L  E I+        K  + +LR ++++ +   + L  +    E+   ++E 
Sbjct: 1114 EVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKER 1173

Query: 137  QLLDFLGKYHS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            Q  + + + +   T ++  N  I      L+ ++  M+S    + +L  K S + AL   
Sbjct: 1174 QYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNL--KKSEIDALNLQ 1231

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-- 252
                   +K L +KN  ++  L +  + V   T++++E   E     + ++EL D+    
Sbjct: 1232 -------IKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKAS 1284

Query: 253  -------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                   LE     ++I  +L+        ++ K+T L K +E+  
Sbjct: 1285 EDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSE 1330



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 11/203 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            ++    D  +  I  L+  ++T  +A D   NK   L K  E  E +L  +    +   +
Sbjct: 1044 KSDSSKDEYESQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELET 1103

Query: 151  KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH---QKDLTMMKNL 205
            K+      +  V  + +        +     + + + + LRA L S     +DL      
Sbjct: 1104 KLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKK 1163

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +E+   ++      ER   +   +L + I   +     I +  DE   E           
Sbjct: 1164 YEEQIANK------ERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQ 1217

Query: 266  LEQNQRTFADEMSKLTILEKTRE 288
                +        ++  L+K  E
Sbjct: 1218 SNLKKSEIDALNLQIKELKKKNE 1240


>gi|126462207|ref|YP_001043321.1| RND family efflux transporter MFP subunit [Rhodobacter sphaeroides
           ATCC 17029]
 gi|126103871|gb|ABN76549.1| efflux transporter, RND family, MFP subunit [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 390

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 84/244 (34%), Gaps = 27/244 (11%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE + S   A L+S +  +   +    +   ++   ++ ER V + T +LR+     +  
Sbjct: 98  LELQKSQFTASLASARATIAQAE---AQVLEAKASADEAER-VNRRTAQLRQQGAASQAA 153

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                     AN           + LE  +   A   ++L  +E    + ++++P+AG I
Sbjct: 154 ADTAQAASVSANARVMV----ARQTLEAARAQVALAEAQLANIELQLNRTSVVAPVAGEI 209

Query: 301 VYNQSFSSSNYAQQ-SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           V  ++      A    +P+  ++       + A V  + +  ++ G T  +R        
Sbjct: 210 VS-RTAKVGAIASAQGEPMFTLL-RDGQLELFADVAEQDLLRLRPGQTVLIR----TLGA 263

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +  +  +  ++P I                + I       +   +R+G  AE       
Sbjct: 264 AEPLEGTVRLVEPTIDTATRLG------RARIAI------GHREAVRSGMFAEAEILVSE 311

Query: 420 TTLA 423
               
Sbjct: 312 RDAL 315



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 73/244 (29%), Gaps = 7/244 (2%)

Query: 44  VSSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V +SG I   + V  ++       I+  + + G  + +G  L                 S
Sbjct: 50  VIASGLIGAVELVQ-VQPLIEGQPIETLEADVGDTVAEGQVLARLSVSTLELQKSQFTAS 108

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           + + R  I   ++ +       D  E+    R  QL        +         +S+  R
Sbjct: 109 LASARATIAQAEAQVLEAKASADEAERVNR-RTAQLRQQGAASQAAADTAQAASVSANAR 167

Query: 163 SLKMKLT---RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            +  + T       + L    L N    L            ++    +  A++       
Sbjct: 168 VMVARQTLEAARAQVALAEAQLANIELQLNRTSVVAPVAGEIVSRTAKVGAIASAQGEPM 227

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
             ++    LEL  ++ EQ  +     +      L  A  L E +  L +     A  + +
Sbjct: 228 FTLLRDGQLELFADVAEQDLLRLRPGQTVLIRTLGAAEPL-EGTVRLVEPTIDTATRLGR 286

Query: 280 LTIL 283
             I 
Sbjct: 287 ARIA 290


>gi|311260123|ref|XP_003128353.1| PREDICTED: coiled-coil alpha-helical rod protein 1-like [Sus
           scrofa]
          Length = 844

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 78/205 (38%), Gaps = 5/205 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              ++L+   ++  R  +D E      +  +     +     E Q L  + +      + 
Sbjct: 564 ATEMNLELEQLREERNRLDAELQLSAHIIQQEVGRAREQGEVERQKLSEVAQQLEQELQH 623

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNA 210
               ++S+   L+      +        L  + +  + +   +  +K   +   L E+ +
Sbjct: 624 TQESLASLGLQLEAARQGQQESTAEAAGLRQELTQQQEIYGQALQEKVAEVETRLREQLS 683

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNML---RHINELYDEANLEFANYLKEISRDLE 267
            S+  LN+  R   K+ + LR+   +        + +  L +EA  E    L +  ++LE
Sbjct: 684 ESERRLNEARREHTKAVVSLRQMQRKATREKERNQELRRLQEEARKEEGQRLTQRLKELE 743

Query: 268 QNQRTFADEMSKLTILEKTREQKTI 292
           +++      + +  +L + ++Q+ +
Sbjct: 744 RDKNLMLATLQQEGLLSRYKQQRLL 768



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 72/211 (34%), Gaps = 8/211 (3%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           ++     D+ +    N R  +   +  +     +     ++ E    Q L    +  S  
Sbjct: 104 VQPPAHQDVLERLSDNQRPQVTMWEKEVSGKGQEPGWRGRSVELAGSQALSQQAELISRQ 163

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ------KDLTMMK 203
            +        V    +  L +   +    ++LE  +   +A  +  +          +++
Sbjct: 164 LQELRRLEEEVRVLRETSLQQKMRLESQAMELEALARAEKAGRAEAEGLRAALAGAEVVR 223

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
              E+   SQ +L + +R+  +    L +   E  + L H     +++         E +
Sbjct: 224 KNLEEG--SQRELEEVQRLHQEELSSLTQAHQEALSSLTHKAGGLEKSLSSLETRRSEEA 281

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           ++L   QR       +L+  ++  E +  L+
Sbjct: 282 KELAAAQREAELLRQQLSKTQEALEAQVTLA 312



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 59/205 (28%), Gaps = 1/205 (0%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
                +       ++KV             + L   +              EQL +   +
Sbjct: 521 ARLPSLSARLSYAVRKVHTIRGLMARKLALAQLRQESCPPPPPATEMNLELEQLREERNR 580

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +      +     V R+ +      + +      LE +    +  L+S    L   + 
Sbjct: 581 LDAELQLSAHIIQQEVGRAREQGEVERQKLSEVAQQLEQELQHTQESLASLGLQLEAARQ 640

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             +++      L Q+     +   + L+E + E +  LR      +    E      +  
Sbjct: 641 GQQESTAEAAGLRQELTQQQEIYGQALQEKVAEVETRLREQLSESERRLNEARREHTKAV 700

Query: 264 RDLEQNQRTFADEMSKLTILEKTRE 288
             L Q QR    E  +   L + +E
Sbjct: 701 VSLRQMQRKATREKERNQELRRLQE 725



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 69/205 (33%), Gaps = 10/205 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL--DFLGKYHST 148
              + + + + +    +  ++++   L+ L           E     L   + + K    
Sbjct: 169 RLEEEVRVLRETSLQQKMRLESQAMELEALARAEKAGRAEAEGLRAALAGAEVVRKNLEE 228

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ-KDLTMMKNLFE 207
            S+     +  +++     LT+     L+   L +K+  L   LSS + +     K L  
Sbjct: 229 GSQRELEEVQRLHQEELSSLTQAHQEALS--SLTHKAGGLEKSLSSLETRRSEEAKELAA 286

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN---ELYDEANLEFANYLKEISR 264
                + +L +Q+    +  LE +  + E            E++ +        L E  +
Sbjct: 287 AQ--REAELLRQQLSKTQEALEAQVTLAENLRRYVGEQVPPEVHSQTWESERQELLETVQ 344

Query: 265 DLEQNQRTFADEMSKLTILEKTREQ 289
            L++++         L +  ++   
Sbjct: 345 QLQEDRDGLHTTAELLQVRVQSLTH 369



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 14/143 (9%), Positives = 43/143 (30%), Gaps = 2/143 (1%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   + S+ +L   ++  +        +   L +    ++E     L +  +   
Sbjct: 616 QLEQELQHTQESLASLGLQLEAARQGQQESTAEAAGLRQELTQQQEIYGQALQEKVAEVE 675

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 +S   R L           ++   ++ K++  +      ++     +   E+  
Sbjct: 676 TRLREQLSESERRLNEARREHTKAVVSLRQMQRKATREKERNQELRRLQEEARK--EEGQ 733

Query: 211 VSQNDLNQQERIVYKSTLELREN 233
                L + ER        L++ 
Sbjct: 734 RLTQRLKELERDKNLMLATLQQE 756


>gi|302187949|ref|ZP_07264622.1| secretion protein HlyD [Pseudomonas syringae pv. syringae 642]
          Length = 294

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 70/224 (31%), Gaps = 21/224 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q+      R    +  E +E   + +   +         NL     L+E      +  
Sbjct: 78  IDQDRFRLALRQAQATVAERQETWEQARRENKR---NRGLGNLVAREQLEESQSREARAL 134

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +    +   +   ++  I SP+ G  + +++     +    +P++ +V  S   +I
Sbjct: 135 SALGEAKVAVDAAQLNLDRSVIRSPVEGY-LNDRAPREHEFVTAGRPVLSVV-DSTSFHI 192

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQDN 379
                  ++  +  G    +R             +I+  I+           P ++   +
Sbjct: 193 DGYFEETKLDGIHVGQGVDIRVIGDNARLTGHVVSIVAGIEDRDRSSGSNLLPNVNPAFS 252

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT--AKNTT 421
            ++  +   V +   D+     +  +  G  A V      +  +
Sbjct: 253 WVRLAQRIPVRIAFDDV---PADFRMIAGRTATVSIIDDTQERS 293



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++V+I    SG+I+K +V +   + +G  L T +       +   + ++   +   +  +
Sbjct: 46  DIVQIAPDVSGLIQKVEVTDNQPVHKGQVLFTIDQDRFRLALRQAQATVAERQETWEQAR 105

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                     +++ +      EQL +   +     S +    ++     L +  + +RS
Sbjct: 106 RENKRNRGLGNLVAR------EQLEESQSREARALSALGEAKVAVDAAQLNLDRSVIRS 158


>gi|292669109|ref|ZP_06602535.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292649272|gb|EFF67244.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 349

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 57/199 (28%), Gaps = 17/199 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           QQ+     + +    + +E     R   E    A    A  L +   +    +  +   +
Sbjct: 94  QQQANATGAGVAAARSRYELARTERARYEELYAAQAISAAMLDQYRTNERAAEAAYRQAV 153

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++            +++   G +    +          Q ++ +        I   +   
Sbjct: 154 AQDATSRNALGYTNLIAGADGVVSNIAA-EEGQVVAAGQTVLTLT-QEGEREIEISIPES 211

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
           ++  V  G  A V                + +I P+             Y   + +T+  
Sbjct: 212 RLSEVVVGMPAAVSLWA----TGAMLSGYVREISPVPDAASRT------YTARIALTN-- 259

Query: 398 FSDNNIELRNGFPAEVLFT 416
            + +++ L  G  A V  T
Sbjct: 260 -APDDLPL--GMTARVHLT 275



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/137 (8%), Positives = 35/137 (25%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I    V+ G+ +  G  L+  +  +     +     +   R   +  ++        
Sbjct: 65  GGQILSRNVDAGAHVRAGDVLMVIDARDVQQQANATGAGVAAARSRYELARTERARYEEL 124

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y     +    ++   +      +    V     S         +     +  N    E 
Sbjct: 125 YAAQAISAAMLDQYRTNERAAEAAYRQAVAQDATSRNALGYTNLIAGADGVVSNIAAEEG 184

Query: 184 KSSLLRALLSSHQKDLT 200
           +       + +  ++  
Sbjct: 185 QVVAAGQTVLTLTQEGE 201


>gi|283784645|ref|YP_003364510.1| macrolide-specific efflux protein [Citrobacter rodentium ICC168]
 gi|282948099|emb|CBG87664.1| macrolide-specific efflux protein [Citrobacter rodentium ICC168]
          Length = 372

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 71/224 (31%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 112 LRAQRQQAEAELKLARVTYGRQQQLAKTQAVSRQDLDTAATEMAVKQAQIGTIDAQIKRN 171

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L       +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 172 QASLDTARTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 230

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + ++K G  A   F    D + +      E +   +      +    +Y    ++ 
Sbjct: 231 SEADVIYLKPGLKAW--FTVLGDPQTR-----YEGVLKDVLPTPEKVNDAIFYYARFEVP 283

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
               +   I LR    A+V     +     T     +  P+ DN
Sbjct: 284 ----NPKGI-LRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 322



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 64/174 (36%), Gaps = 17/174 (9%)

Query: 18  KRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNEDNVVEIKSPF 63
           + + ++ I+ + G+  W  L                ++ SV ++G++     V ++ +  
Sbjct: 11  RYLLVIFILILGGVALWRTLNAPLPNYQTLIVRPGDLQQSVLATGKLDALRKV-DVGAQV 69

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K   V  G ++ +   L   +  +  + I   + ++  LR      ++ L      
Sbjct: 70  SGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVT 129

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           Y   ++  +++     D      +T   V    I ++   +K     + +   N
Sbjct: 130 YGRQQQLAKTQAVSRQDL--DTAATEMAVKQAQIGTIDAQIKRNQASLDTARTN 181


>gi|270014997|gb|EFA11445.1| hypothetical protein TcasGA2_TC013627 [Tribolium castaneum]
          Length = 1995

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 84/217 (38%), Gaps = 15/217 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE-----EQLLD 140
              + +    ++D K+  +  LR   +     ++++  + D L K  +  E     ++ + 
Sbjct: 1335 ELDKVRYKAMLDDKQSELDQLRKENEAMHDQMEYMRKETDELRKKLDDYEKVNKVQRNIS 1394

Query: 141  FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN-KSSLLRALLSSHQKDL 199
                      +     +SS+ +S K++L   +  Y N+L + N +   L+  +   +++ 
Sbjct: 1395 ADSSAMEKEIRQLKAKLSSIEKSKKLELGEYKMRYDNQLSIVNGELQQLQGQVMRFKRER 1454

Query: 200  TMMKNLFEKNAVSQNDLNQQERIVYKSTL---------ELRENIHEQKNMLRHINELYDE 250
               K++ E    +  DL    R    +T          E +  I   +  +  + +   E
Sbjct: 1455 DTYKHMLESAQKTIGDLKNSPRSAKDNTNPSAHYDELEESKTKIATLEQQISCMEDELSE 1514

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            A LE +    E+  +    +   ++  S++  LE+ +
Sbjct: 1515 ARLECSRLKTELVSERSTWEVKMSELHSRVNELEEEK 1551



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 84/209 (40%), Gaps = 5/209 (2%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            E  +  +  D     I  L+ ++ T   ++  L  ++ K + L+   +S+E++L     +
Sbjct: 946  EQKKVQEEKDKLDEEIAKLKANLKTATYKQDELTLISQKAESLKLDLDSKEKELKTIKKE 1005

Query: 145  YHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
              S  +++      +S + R       +++       DLE K    ++   S + + +  
Sbjct: 1006 LDSKINELSEKASKVSQLERKFSETEEKLKIAEKREKDLEAKIEEEKSKTKSKEGEQSKW 1065

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
                +K      +LN +   +  +    ++ I   +  L+   E + + +      + ++
Sbjct: 1066 NEERKKYNNQIEELNNKILSLETTVESKKKLIERLEENLKKERESFSKVDELETREITKL 1125

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +L +++   AD  SKL   +K+++   
Sbjct: 1126 KDELSKSKANLADVESKLASSQKSQKNLE 1154



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 27/219 (12%), Positives = 71/219 (32%), Gaps = 29/219 (13%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
               +     LR  +   ++  + L ++ + ++K     EEQ+ +    +    +     
Sbjct: 332 AQAAQKIADELRSKLLAAETLCEELMDENEDIKKELRDMEEQMDEMQDNFREDQA----V 387

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK-------------DLTMM 202
             +S+ + L       R +       E K+  L    +  ++             +L  M
Sbjct: 388 EYTSLKKELDQTTKNCRILSFKLRKAERKTEQLEQEKNEAERKLKEISGGQSTLANLEKM 447

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL------------YDE 250
           K L +   ++     + ++ + ++  +L+E     K     +  +               
Sbjct: 448 KQLEQDLKLANEVSIRLQKELDETNQKLQEESKTSKKKAPKLGSIGKFPSADGKVSRESL 507

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                 +   ++ RDL+ +    AD   +L   E+  + 
Sbjct: 508 TRGGSQDDPAQLLRDLQDSMEREADLREQLKFAEEEAQN 546



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 63/206 (30%), Gaps = 4/206 (1%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ED   + ++ LKK++ +  R    +  +                +  +   +    + 
Sbjct: 553 RIEDDNESLVLQLKKMATRA-RSRKLSPTNNSRLTPEPPSEKGDVSDDEDPAEIKLQLEL 611

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               + V    +  +        T+ + +                           +K L
Sbjct: 612 SEQEASVLRRKVEDLEAENHRIKTKNKELQDKLTAKTTTKRTAVGGEKGTTLQNQKLKVL 671

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            ++    +  L ++ER   +   EL  N    K++ +  +   D+  L+    L+ I ++
Sbjct: 672 EDEANDLRKKLIEKERDCERLHAELSLNQKRSKSVQKSKSLDLDQQTLDLKRQLQVIEQE 731

Query: 266 ---LEQNQRTFADEMSKLTILEKTRE 288
              L    ++   E  KL    K  +
Sbjct: 732 ASILRNKIQSLEAENEKLISENKKLQ 757


>gi|218683033|ref|ZP_03530634.1| HlyD family secretion transport protein [Rhizobium etli CIAT 894]
          Length = 379

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 58/190 (30%), Gaps = 17/190 (8%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            ++ L   E   E  +++   N+   + N+   + L++ S   +Q   +     S L   
Sbjct: 112 AEANLAAAEKGVETADLVNKRNQQLFDKNVSPKSQLEQASLSYDQAVSSRDAAASALDQA 171

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +       + +   G +    +           P++  V       ++  V    I   K
Sbjct: 172 KNQVSYAELKADYKGIVTTINAD-VGQVVASGTPVVT-VAVDGEKEVQIAVPENDIAEFK 229

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G T    F     +        + ++     QQ         + V + +       N+ 
Sbjct: 230 PGKTVKASFWADDRL---VLDGKVREVSGSADQQSRT------FAVRVSL------PNDP 274

Query: 404 ELRNGFPAEV 413
           ++  G  A +
Sbjct: 275 QVLLGMTATI 284



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 38/115 (33%), Gaps = 4/115 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V+ G ++  G  L   +  +    +   + ++      ++T     D +N + 
Sbjct: 78  GKITERLVDIGDKVKPGDVLARMDSTDYQLAVKTAEANLAAAEKGVET----ADLVNKRN 133

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
             L     S + QL      Y    S       +      ++    +++ Y   +
Sbjct: 134 QQLFDKNVSPKSQLEQASLSYDQAVSSRDAAASALDQAKNQVSYAELKADYKGIV 188


>gi|157414888|ref|YP_001482144.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157385852|gb|ABV52167.1| putative periplasmic protein [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747525|gb|ADN90795.1| Macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315931806|gb|EFV10761.1| macA [Campylobacter jejuni subsp. jejuni 327]
          Length = 390

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  ++ + G++  +D V ++ +  SG I K  V+ G+ + QG  +   +  +  + +D+ 
Sbjct: 42  ISQTIEAVGKVYAKDQV-DVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDIT 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +++ + +++++K AL+  + +Y   +K + ++   L +   + ++  +      ++ 
Sbjct: 101 KAQLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYT--LKANVAE 158

Query: 160 VYRSLKMKLTRMRSIY 175
           +   +      +++  
Sbjct: 159 LNAQVVQLEITLKNAQ 174



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 6/167 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q +  +      K  LE+    ++++  L        E      N    +  ++ +   
Sbjct: 102 AQLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELNA 161

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHSKLTY 329
                   L   +K     TI +P+ G ++             +Q    IV   +     
Sbjct: 162 QVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVD-EGQTVNANQNTPTIVRIANLDEME 220

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           +R ++    +  +K G    + F    D  +K + A I  IDP  ++
Sbjct: 221 VRMEIAEADVSKIKVG--TELDFSLLND-PQKTYHAKIASIDPADTE 264


>gi|553596|gb|AAA59888.1| cellular myosin heavy chain [Homo sapiens]
          Length = 1337

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 5/199 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ E+  L+  N K    +K  E R  +    L +     SK
Sbjct: 958  ARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTE-EEEKSK 1016

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +     +     R+R     R +LE     L    +     +     L  + A 
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIA---ELQAQIAE 1073

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +  L ++E  +  +   + E   ++   L+ I EL  +   E    L+       + ++
Sbjct: 1074 LKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELESQI-SELQEDLESERASRNKAEK 1132

Query: 272  TFADEMSKLTILEKTREQK 290
               D   +L  L+   E  
Sbjct: 1133 QKRDLGEELEALKTELEDT 1151



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 70/225 (31%), Gaps = 37/225 (16%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH-------------- 146
               + LR  +  +K  L+ + +  +   +  E R + L     K                
Sbjct: 897  AEAEELRARLTAKKQELEEICHDLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEE 956

Query: 147  --------------------STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                     +       + +  K+   R+     N  + E KS 
Sbjct: 957  SARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSK 1016

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L  L + H+  +T ++    +    + +L +  R +   + +L + I E +  +  +  
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKM 1076

Query: 247  LYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTRE 288
               +   E    L  +  +  Q     +   +  S+++ L++  E
Sbjct: 1077 QLAKKEEELQAALARVEEEAAQKNMALKKIRELESQISELQEDLE 1121



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 69/211 (32%), Gaps = 12/211 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
               ++ ++   ++L+      +  +  L  + +  E A +  + + +    K      + 
Sbjct: 921  EARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLEEEQ 980

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             +       + +  K+   R+     N  + E KS  L  L + H+  +T ++    +  
Sbjct: 981  IILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNKHEAMITDLEERLRREE 1040

Query: 211  VSQNDLNQQER-------IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-- 261
              + +L +  R        +     EL+  I E K  L    E    A         +  
Sbjct: 1041 KQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKN 1100

Query: 262  -ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               + + + +   ++    L     +R +  
Sbjct: 1101 MALKKIRELESQISELQEDLESERASRNKAE 1131


>gi|78045114|ref|YP_361050.1| RND family efflux transporter MFP subunit [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77997229|gb|ABB16128.1| efflux transporter, RND family, MFP subunit [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 345

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 45/132 (34%), Gaps = 5/132 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G I  +     I     G +K+  V+ G ++  G  +L  +D E  + +   +  ++ 
Sbjct: 50  AEGTIEPKT-TENIYVYTPGTVKEVLVKPGQKVKAGQVVLKLDDTELKNQLKEAENQVEL 108

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L   +    S          + + + +S E QL     +      K+    + +    + 
Sbjct: 109 LEVQL----SDAKKAEKLPGMNQTSTKSLEVQLKSARDRVEMLKEKIAQTQLKTKLSGVV 164

Query: 166 MKLTRMRSIYLN 177
           + +        N
Sbjct: 165 LAVNVEAGQTAN 176


>gi|326793269|ref|YP_004311090.1| maltose O-acetyltransferase [Clostridium lentocellum DSM 5427]
 gi|326544033|gb|ADZ85892.1| Maltose O-acetyltransferase [Clostridium lentocellum DSM 5427]
          Length = 721

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/201 (8%), Positives = 58/201 (28%), Gaps = 7/201 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E   L    + + +  R   + E++     +    +    E     R  Q  +   +   
Sbjct: 181 EAERLRQEAEEAEEAERLRQEAEEAERLRQEAEEAERLRQEAEEAERLRQEAEEAERLRQ 240

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              +       +       +            +   +           +++    + L +
Sbjct: 241 EAEEAERLRQEAEEAERLRQEAEEAERLRQEAEEAERLRQEAEEAERLRQEAEEAERLRQ 300

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN--LEFANYLKEISRD 265
           +    + +  +QE    +   +  E     +     + +  +EA    + A   + + ++
Sbjct: 301 E--AEEAERLRQEAEEAERLRQEAEEAERLRQEAERLRQEAEEAERLRQEAEEAERLRQE 358

Query: 266 LEQNQRTFADEMSKLTILEKT 286
            E+ +R   +      IL++ 
Sbjct: 359 AEETERLIQEAEKAREILQEE 379



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 57/191 (29%), Gaps = 4/191 (2%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K+  +  R   + E++       +     +      E+      +             + 
Sbjct: 177 KIQEEAERLRQEAEEAEEAERLRQEAEEAERLRQEAEEAERLRQEAEEAERLRQEAEEAE 236

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             R    +  R+R        L  ++      L    ++   ++   E+    + +  + 
Sbjct: 237 RLRQEAEEAERLRQEAEEAERLRQEAEEAER-LRQEAEEAERLRQEAEEAERLRQEAEEA 295

Query: 220 ERIVYKS-TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           ER+  ++   E      E+   LR   E  +    E     +E      +  R  A+E  
Sbjct: 296 ERLRQEAEEAERLRQEAEEAERLRQEAEEAERLRQEAERLRQEAEE--AERLRQEAEEAE 353

Query: 279 KLTILEKTREQ 289
           +L    +  E+
Sbjct: 354 RLRQEAEETER 364


>gi|325913801|ref|ZP_08176160.1| RND family efflux transporter, MFP subunit [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325539876|gb|EGD11513.1| RND family efflux transporter, MFP subunit [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 412

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/135 (10%), Positives = 44/135 (32%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +     G +     + G ++ +G  L   +        D    + 
Sbjct: 64  ASALGTVTA-LNTVTVSPQVGGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAK 122

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +      N+      V     +++  Q+  +     +  +++ +  +   
Sbjct: 123 RQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVSANDAQMRSAQVQLQ 182

Query: 161 YRSLKMKLTRMRSIY 175
           +  +   +  +  I 
Sbjct: 183 FTRVTAPIDGIAGIR 197



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 52/146 (35%), Gaps = 5/146 (3%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEI 262
            +K   ++Q D    +    ++    R+N         +     D A  ++ +   L   
Sbjct: 97  VKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQ 156

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + Q +   +   +++   +   +   + +PI G I   +     N    S  ++ + 
Sbjct: 157 RNQVAQYEAAVSANDAQMRSAQVQLQFTRVTAPIDG-IAGIRGVDVGNIVSSSSTIVTLT 215

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTA 348
              +  Y+   +  +++Q V+ G  A
Sbjct: 216 -QIRPIYVSFNLPERELQAVRSGQAA 240


>gi|283852688|ref|ZP_06369954.1| secretion protein HlyD family protein [Desulfovibrio sp. FW1012B]
 gi|283571979|gb|EFC19973.1| secretion protein HlyD family protein [Desulfovibrio sp. FW1012B]
          Length = 376

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/369 (12%), Positives = 104/369 (28%), Gaps = 86/369 (23%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
             +V  + +   G +K+  V++  ++ +G  +L  +  +    +D  + ++         
Sbjct: 77  AGHVTAVSAQVPGRVKEVLVDDNQKVAKGDVVLRIDPADYQVRLDQARAALAT------- 129

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                          ++A   +E              S++     +   ++   KL   R
Sbjct: 130 ----------ARRNRDEAVSEQEAARAAAETSRAQVASELATAENADKEKARYDKLASER 179

Query: 173 SIYLN-RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            +    R + +  +   RA L                  V++      +  V  +     
Sbjct: 180 VVAQEARDNADTTARTARAALD-----------------VARKKYAADQTQVALA----G 218

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             I   K  +       D+A L                                      
Sbjct: 219 TRIETAKAQVEEARAAVDKAAL--------------------------------DLAHTE 246

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + + ++G +         +Y Q  Q  + +V  +   ++ A     Q+  ++ G    V 
Sbjct: 247 VHARVSGRVTNKAV-EPGDYIQTGQNFLSLV--NPDIWVVANFKETQLTRMRPGQPVAVT 303

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVILKIT-----DLAFSDNN 402
              Y D    + KA +E +                T  Y +V+ ++      D   +D +
Sbjct: 304 VDTYPDR---EIKAHVESVQRGTGAAFSLLPPENATGNYVKVVQRVPVKIVFDRTDADQD 360

Query: 403 IELRNGFPA 411
           + L  G   
Sbjct: 361 MLLAPGMSV 369


>gi|224077418|ref|XP_002186947.1| PREDICTED: similar to centrosomal protein 2 [Taeniopygia guttata]
          Length = 1511

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 70/222 (31%), Gaps = 16/222 (7%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA-------- 130
             +G  +      E        + + +     +   K  ++ L  + + L+K         
Sbjct: 803  EKGQTIEANLQAELQAARSEVQTAQRRHEEELQGLKEEMNLLLEQREALQKQVGELTSQL 862

Query: 131  FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM-KLTRMRSIYLNRLDLENKSSLLR 189
              SRE Q +        +  +     + +  + +   ++TR       + +L+   S ++
Sbjct: 863  AASRESQEMTVQRAQQMSAKESLESRLCAAQQQISQLEVTREHLKAELQAELQAARSEVQ 922

Query: 190  ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                 H+++L  +K          N L +Q     K   EL   +   +       +   
Sbjct: 923  TAQRRHEEELQGLKEEM-------NLLLEQREAFQKQVGELTSQLAASRESQEMTVQRAQ 975

Query: 250  EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +   E     ++   ++E  Q+   +   +   L+   +   
Sbjct: 976  QDVREAQEESRQKQLEVEHTQKMLEEAKQQNKELQVHLQNLE 1017



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 61/214 (28%), Gaps = 5/214 (2%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL--LDFL 142
           L  ++         ++  ++      +     L  L  K  +L+     + + L  L   
Sbjct: 472 LQMKEESAQAEKAEQQERMERAYREQELLLKDLAALEEKNSLLQSELVVKGQTLEKLQLQ 531

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN---KSSLLRALLSSHQKDL 199
                     F   +    RS+         +   R DL+    K S +   L+  +  L
Sbjct: 532 KDLLEQEKDEFAMALEKAERSVAELTGAQNKLNAERADLQAAAAKMSSINEALALDKVQL 591

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                   +   S     +Q R            +  +K +L       +        + 
Sbjct: 592 NKYVWQVSQEQESLGRALEQLRQESSGQEHEMAQVCREKELLGREKAALEGRLAATERHQ 651

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            ++S+ L + +       S+L   ++   Q  + 
Sbjct: 652 HDLSKQLAETRSAKESLDSRLCAAQQQISQLEVT 685



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 76/204 (37%), Gaps = 12/204 (5%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +++    + K+ ++K L   ++  +S+         +   A E        FL K     
Sbjct: 323 VQSQKQNEEKEKTMKTLNDTVEILESSWIEKEFAASLTNSAKEENL-----FLQKLIKNI 377

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           ++     +S+   S K  L + R       +++ +   L             +++L E  
Sbjct: 378 TEALREELSARQDSNKFLLQQQRHQEEKCREVQQRLEQLEDKCKKSSSHQQHLQSLVE-- 435

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              ++D    E    K+  EL+E +  ++     + +   E  ++  +   E +   E+ 
Sbjct: 436 -TLRSDYTNLE----KTREELQEQLGLREREALRLRQSNAELQMKEESAQAEKAEQQERM 490

Query: 270 QRTFADEMSKLTILEKTREQKTIL 293
           +R + ++   L  L    E+ ++L
Sbjct: 491 ERAYREQELLLKDLAALEEKNSLL 514



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 67/210 (31%), Gaps = 9/210 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +     +L       L   +   +     L+ +      A ES + +L     +      
Sbjct: 625 QVCREKELLGREKAALEGRLAATERHQHDLSKQLAETRSAKESLDSRLCAAQQQISQ--- 681

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  + +   + +      S    R   E + +L +      +++    K LFE   
Sbjct: 682 --LEVTRNHLEAQVLIVTQTKESSVRERHHAEMQETLEQWEKEKAEREQEHKKVLFEMRQ 739

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA---NYLKEISRDLE 267
                L QQE    +     RE + E++     ++E   +   E +     ++++ ++L+
Sbjct: 740 KVATLLAQQEEERTRFEDAKREVLLEEQKEKSALSEALLQTQGELSQAHQQVQQLRQELK 799

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIA 297
           + Q       + L   E    +  + +   
Sbjct: 800 EQQEKGQTIEANLQ-AELQAARSEVQTAQR 828


>gi|165918609|ref|ZP_02218695.1| putative efflux transporter, RND family, MFP subunit [Coxiella
           burnetii RSA 334]
 gi|165917737|gb|EDR36341.1| putative efflux transporter, RND family, MFP subunit [Coxiella
           burnetii RSA 334]
          Length = 377

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 43/129 (33%), Gaps = 4/129 (3%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           ++ G I    +V  I+   SG+IKK     G  +  G  L   +       +   + ++ 
Sbjct: 56  TTQGSIEASQSV-TIQPQVSGVIKKIGFMPGQLVTVGQLLFEIDPTTYQAALVKAQANLA 114

Query: 105 NLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
             +  +   +       +      V ++ ++  + QL + L       + +        Y
Sbjct: 115 KDQAQLSATQKDAKRYQSLVKGNFVSQQQYDQIKAQLDEQLSTVKLDEAAIKQSEAELAY 174

Query: 162 RSLKMKLTR 170
             +   +T 
Sbjct: 175 TQITAPITG 183


>gi|254285305|ref|ZP_04960270.1| HlyD family secretion protein [Vibrio cholerae AM-19226]
 gi|150424577|gb|EDN16513.1| HlyD family secretion protein [Vibrio cholerae AM-19226]
          Length = 364

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 55/167 (32%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L + +  +    ++  ++ +KN        K+  +     
Sbjct: 77  SGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       G+ S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +    +          +   + + E +A+     + Q R     
Sbjct: 197 DLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLQLRTYSTQ 243



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 71/223 (31%), Gaps = 26/223 (11%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + +    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 90  QVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYD 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I +P  G I      + +   Q +Q +M I+       +  ++
Sbjct: 150 LAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQV-QANQVIM-ILQDLNDLEVAIEI 207

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-----YEV 389
                          V          +    +    +     Q     TQ       Y V
Sbjct: 208 ------------PHRVMLS--GVRNTRAIAELSAIPNQQFDLQLRTYSTQPSSDSQTYSV 253

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH-PIT 431
           +L   DL        +  G  A+VL  A N T    +I  P+T
Sbjct: 254 VLGFEDL----KGFRVMPGMSAKVLPVADNPTAENTLITLPLT 292


>gi|29436380|gb|AAH49849.1| MYH9 protein [Homo sapiens]
          Length = 1374

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 5/199 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ E+  L+  N K    +K  E R  +    L +     SK
Sbjct: 958  ARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTE-EEEKSK 1016

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +     +     R+R     R +LE     L    +     +     L  + A 
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIA---ELQAQIAE 1073

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +  L ++E  +  +   + E   ++   L+ I EL  +   E    L+       + ++
Sbjct: 1074 LKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELESQI-SELQEDLESERASRNKAEK 1132

Query: 272  TFADEMSKLTILEKTREQK 290
               D   +L  L+   E  
Sbjct: 1133 QKRDLGEELEALKTELEDT 1151



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 70/225 (31%), Gaps = 37/225 (16%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH-------------- 146
               + LR  +  +K  L+ + +  +   +  E R + L     K                
Sbjct: 897  AEAEELRARLTAKKQELEEICHDLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEE 956

Query: 147  --------------------STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                     +       + +  K+   R+     N  + E KS 
Sbjct: 957  SARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSK 1016

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L  L + H+  +T ++    +    + +L +  R +   + +L + I E +  +  +  
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKM 1076

Query: 247  LYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTRE 288
               +   E    L  +  +  Q     +   +  S+++ L++  E
Sbjct: 1077 QLAKKEEELQAALARVEEEAAQKNMALKKIRELESQISELQEDLE 1121



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 69/211 (32%), Gaps = 12/211 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
               ++ ++   ++L+      +  +  L  + +  E A +  + + +    K      + 
Sbjct: 921  EARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLEEEQ 980

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             +       + +  K+   R+     N  + E KS  L  L + H+  +T ++    +  
Sbjct: 981  IILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNKHEAMITDLEERLRREE 1040

Query: 211  VSQNDLNQQER-------IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-- 261
              + +L +  R        +     EL+  I E K  L    E    A         +  
Sbjct: 1041 KQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKN 1100

Query: 262  -ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               + + + +   ++    L     +R +  
Sbjct: 1101 MALKKIRELESQISELQEDLESERASRNKAE 1131


>gi|329889688|ref|ZP_08268031.1| cation efflux system protein cusB [Brevundimonas diminuta ATCC
           11568]
 gi|328844989|gb|EGF94553.1| cation efflux system protein cusB [Brevundimonas diminuta ATCC
           11568]
          Length = 428

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 52/194 (26%), Gaps = 41/194 (21%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFA-------DEMSKLTILEKTREQKTILSPIAGTIVYN 303
           A  E+    +     L Q  R            ++ +   E+ R+  TI SP AG I   
Sbjct: 171 AQTEYLAVRRTGDAALTQAARRRLVLMGMSDSLIASVERSERPRDTITIASPTAGAIRTL 230

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKK 362
              S      Q   L +I       ++ A +       ++ G +       +   R   +
Sbjct: 231 AVRS-GMSVTQGATLAEISGL-STVWLNAAIPEALAGQLRVGQSVEATLSAFPSERFTGR 288

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF------------- 409
             A++ ++                         +  ++    LR G              
Sbjct: 289 LSALLPEVSGDS---------------RTFTGRIELANRGGRLRPGMFGRVVFGGATTPA 333

Query: 410 ---PAEVLFTAKNT 420
              P+E +      
Sbjct: 334 LLVPSEAVIRTGQR 347


>gi|319780379|ref|YP_004139855.1| secretion protein HlyD family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166267|gb|ADV09805.1| secretion protein HlyD family protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 429

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/359 (11%), Positives = 100/359 (27%), Gaps = 81/359 (22%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V     + +   L           +   +  +  +R  + T +++       
Sbjct: 128 SGTVSEIDVHENEAVKKDQVLFRLRPASFETALAAAQAQLGTVRNQVLTLQASY------ 181

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                                              ++    +  +    + +  + DL  
Sbjct: 182 -------------------------------QQSQALIEQAQADIPYYEAAFQRQQDLLK 210

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
            S+  +A   S Q DL            ++  ++  +     +  +L  ++ +       
Sbjct: 211 TSTSSKATFDSAQHDL----------VAARQKVSVAQAQAQATLAQLGGDVSQ------- 253

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                    +E   +  +    ++  QR  AD                + +P  G +   
Sbjct: 254 --------PVEKNPFYLQAQSAVDDAQRNLAD--------------SIVKAPFDGIVTNV 291

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR-EKK 362
            +     Y   SQP   ++  +   +I A+    ++ +V+ G TAT+    Y       +
Sbjct: 292 DALQVGKYLPASQPAFSLISATD-LWIAAEPKETELTYVRPGQTATISVDSYPGAVWHGR 350

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITD---LAFSDNNIELRNGFPAEVLFTAK 418
             +I        S       T  + +V+ +I     +        LR G    V     
Sbjct: 351 IASISPASSSSFSLLPAQNTTGNWVKVVQRIPMRVTVDDLQGKPPLRGGMSVVVGIDTG 409


>gi|260775441|ref|ZP_05884338.1| membrane-fusion protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608622|gb|EEX34787.1| membrane-fusion protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 359

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 57/180 (31%), Gaps = 18/180 (10%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           E+   +  + E   +A     +   +        Q    +  + ++  +       + +P
Sbjct: 119 ERAKAMLKVREKEYKAAQSLKDKGLQGEVAFSNAQAALVEAKAMVSNAKIALRNTAVTAP 178

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
            +G +         ++     P+  ++       I A V+ + IQ +     A+V F   
Sbjct: 179 FSGIVDSLDI-ELGDFVGVGDPVASLI-DLSQIVIEADVSERHIQDLTLNQPASVSF--- 233

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             I  +K +  +  I  I S   N               ++   +   ++  G  AEV  
Sbjct: 234 --IGGEKVEGKVRYISRISSASTNTF-----------PIEIILPNPQQKIPAGISAEVEL 280


>gi|251789659|ref|YP_003004380.1| hypothetical protein Dd1591_2055 [Dickeya zeae Ech1591]
 gi|247538280|gb|ACT06901.1| conserved hypothetical protein [Dickeya zeae Ech1591]
          Length = 442

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 71/198 (35%), Gaps = 6/198 (3%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
           +   W++L  +      R     ++  + L+   +L+P+  SV +  E++       +++
Sbjct: 155 YGHAWRSLTASRRRRRPRPNRRWVMAGLALLVAIMLIPVRQSVIAPAEVVAH-RPALVRA 213

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           P +G+I +        + +G  LL  +  E  + ++  +            +   L   +
Sbjct: 214 PLAGVIDEIVARPNQPVTRGQVLLRLDSRELQNQLESARQQFAARDAEY-RQAQQLALSD 272

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS---SVYRSLKMKLTRMRSIYLNR 178
                      SR EQ    +    +  ++          +++  +   L R  S+    
Sbjct: 273 ADAKAQLAVLASRREQGRAEMAFLQAQLARTELSAPRDGVAIFDDVSDLLGRPVSVGERI 332

Query: 179 LDLEN-KSSLLRALLSSH 195
           + + + + S L  LL + 
Sbjct: 333 MQVADPQESELEILLPAA 350



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/223 (11%), Positives = 69/223 (30%), Gaps = 17/223 (7%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           A     + + + ++   + EL+  +   +      +  Y +A  + A    +    L   
Sbjct: 224 ARPNQPVTRGQVLLRLDSRELQNQLESARQQFAARDAEYRQAQ-QLALSDADAKAQLAVL 282

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-PHSKL 327
                   +++  L+    +  + +P  G  I  + S          + +M++  P    
Sbjct: 283 ASRREQGRAEMAFLQAQLARTELSAPRDGVAIFDDVSDLLGRPVSVGERIMQVADPQESE 342

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             I   +       +  G    +      D  +    A +++I    +   +N+     Y
Sbjct: 343 LEI--LLPAADAIALSPGAEVRLFLNVAPDRSQP---AELQQIGYRATLTPDNMMA---Y 394

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII-HP 429
           ++  +     F      ++ G         + T L   ++  P
Sbjct: 395 KLRAR-----FQQQEALVQIGLKGSAKIYGERTVLIAWLLRKP 432


>gi|170683052|ref|YP_001744329.1| macrolide transporter subunit MacA [Escherichia coli SMS-3-5]
 gi|170520770|gb|ACB18948.1| macrolide-specific efflux protein MacA [Escherichia coli SMS-3-5]
          Length = 371

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 66/202 (32%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
                + N  LR    A+V   
Sbjct: 283 -----NPNGLLRLDMTAQVHIQ 299



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|41350446|gb|AAS00505.1| fast skeletal muscle myosin heavy chain [Siniperca chuatsi]
          Length = 1937

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 81/214 (37%), Gaps = 12/214 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ----LLDFLG 143
            +  E+ + ++ K  S++  +  +  E   L     + + L    + ++      L ++  
Sbjct: 1402 DAEESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQ 1461

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY    +++   G     RSL  +L +M++ Y   LD   +   ++    + Q++++ + 
Sbjct: 1462 KYEEGQAEL--EGAQKEARSLSTELFKMKNSYEESLD---QLETMKRENKNLQQEISDLT 1516

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                +   S ++L + ++ V     E++  + E +  L H         LE      E+ 
Sbjct: 1517 EQIGETGKSIHELEKAKKTVETEKTEIQSALEEAEGTLEHEEAKILRVQLELNQIKGEVD 1576

Query: 264  RDLEQNQRTFADEM---SKLTILEKTREQKTILS 294
            R L +             ++    ++     + S
Sbjct: 1577 RKLAEKDEEMEQIKRNSQRVMDSMQSALDSEVRS 1610



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 81/241 (33%), Gaps = 22/241 (9%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREEQLLD 140
            L  +  ++   +  +  +++ ++  ++ EKS     +D L++  + + KA  + E+    
Sbjct: 1195 LRKKQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLSSNMEAVAKAKGNLEKMCRT 1254

Query: 141  FLGKYHSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
               ++    SK       ++ +        T          + E   S L     +  + 
Sbjct: 1255 LEDQFSELKSKNDETVRQLNDINAQKARLQTENGEYSRQLEEKEALVSQLTRGKQAFTQQ 1314

Query: 199  LTMMKNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHI 244
            +   K   E+   ++N L               +Q     ++  EL+  + +  + +   
Sbjct: 1315 IEEFKRHVEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQW 1374

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               Y+   ++    L+E  + L Q  +   + +  +     + E+      + G +    
Sbjct: 1375 RSKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVNSKCASLEKTKQR--LQGEVEDLM 1432

Query: 305  S 305
             
Sbjct: 1433 I 1433



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 72/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K+     L   I+ E+S    L  K   L+   
Sbjct: 1059 EGDLKLAQESIMDLENDKQQSDEKIKKKEFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1118

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1119 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQK 1176

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            L    ++ T+                   +    S  EL E I   + + + + +   E 
Sbjct: 1177 LRRDLEEATLQHEATAS---------ALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1227

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +       + +   +LE+  RT  D+ S+L        ++
Sbjct: 1228 KMEIDDLSSNMEAVAKAKGNLEKMCRTLEDQFSELKSKNDETVRQ 1272


>gi|304322233|ref|YP_003855876.1| RND efflux membrane fusion protein [Parvularcula bermudensis
           HTCC2503]
 gi|303301135|gb|ADM10734.1| RND efflux membrane fusion protein [Parvularcula bermudensis
           HTCC2503]
          Length = 341

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 59/184 (32%), Gaps = 13/184 (7%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L E+ A  +++   + R    +      ++   +++         + +      L+E+ 
Sbjct: 102 RLLERRAQEKDEAIAEVRAAEAALRSAERDLARTESLEGEGLAAPRDVDSGII-RLQELR 160

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             +   +   A    +L +    +    + +P  GT++       + Y    Q L    P
Sbjct: 161 AQMASARARLA----RLDVDISRQSAGEVTAPRDGTVLELTGGDRATYVTAGQRLALFQP 216

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR--------EKKFKAIIEKIDPIIS 375
                 +   +  + +  V+ G    + F  +  ++           F+ ++  +DP   
Sbjct: 217 DPTARAVALLINGRDVPLVQPGADVRLEFEGFPALQFTGWPGLPTGTFEGVVVSVDPAAQ 276

Query: 376 QQDN 379
               
Sbjct: 277 PDGR 280



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 54/141 (38%), Gaps = 12/141 (8%)

Query: 35  SILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF---E 88
           +IL+P   + +  G +     E+   E+ +  +G I ++ V  G ++  G P+++    +
Sbjct: 41  AILVPWVQTTAGPGIVTTLDPEERSQELSALVAGRIDQWYVREGDRVAAGDPIVSIVDND 100

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSA------LDFLNNKYDVLEKAFESREEQLLDFL 142
                     K  +I  +R      +SA       + L  +     +  +S   +L +  
Sbjct: 101 PRLLERRAQEKDEAIAEVRAAEAALRSAERDLARTESLEGEGLAAPRDVDSGIIRLQELR 160

Query: 143 GKYHSTCSKVFNYGISSVYRS 163
            +  S  +++    +    +S
Sbjct: 161 AQMASARARLARLDVDISRQS 181


>gi|332185829|ref|ZP_08387576.1| efflux transporter, RND family, MFP subunit [Sphingomonas sp. S17]
 gi|332014187|gb|EGI56245.1| efflux transporter, RND family, MFP subunit [Sphingomonas sp. S17]
          Length = 359

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 16/162 (9%)

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E    L+Q Q  +    + +  L+    QK I +P +G I   +  +   Y      + 
Sbjct: 125 AESQELLQQRQAEYDQAAAAVRQLDARIAQKRIRAPFSGQI-GIRRINLGQYLNPGDAVA 183

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +       Y    V  + +  ++ G  ATVR         + F+  +  I+P I +   
Sbjct: 184 TLTAID-RLYADFTVPQQDLGKLRLG--ATVRLTT-DAWPSRTFRGRVTTIEPRIGEDSR 239

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           N+  Q               +++  LR G            +
Sbjct: 240 NVMVQ-----------ALVINSDSALRPGMYVTAALELPPRS 270


>gi|300855403|ref|YP_003780387.1| putative transporter protein [Clostridium ljungdahlii DSM 13528]
 gi|300435518|gb|ADK15285.1| putative transporter protein [Clostridium ljungdahlii DSM 13528]
          Length = 235

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 5/98 (5%)

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           + + EQ  I SPI+G +V  +  +        +  + ++   +  Y+ AK+   +I+ +K
Sbjct: 92  DSSIEQSLIKSPISGIVVKKEVNA-GEVLSPGKTAV-LLADPENFYVTAKIDETKIRRLK 149

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
            G    +    Y   +   F+  I+ I  +     N  
Sbjct: 150 VGQPVQITIDEYGSQK---FQGKIKSISEMTEDALNPT 184


>gi|294635406|ref|ZP_06713897.1| multidrug RND efflux transporter, membrane fusion protein MtdA
           [Edwardsiella tarda ATCC 23685]
 gi|291091213|gb|EFE23774.1| multidrug RND efflux transporter, membrane fusion protein MtdA
           [Edwardsiella tarda ATCC 23685]
          Length = 423

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 50/146 (34%), Gaps = 5/146 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I+  +   G ++   N V ++S   G + K     G Q+  G  L   +       + 
Sbjct: 85  ATIDSYLDGLGTVVAS-NTVTVRSRVDGQLMKLHFTEGQQVQAGDLLAEIDPRPFQIQLQ 143

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   +  +D  +  L     +Y  L K      ++L           + + +   
Sbjct: 144 QAQGALARDQALLDNARRDL----ARYQRLAKDNLVSRQELDTQASLVAQAQASLVSDRA 199

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLEN 183
           +     L++  +R+R+    R  L  
Sbjct: 200 NVANAELQLDYSRIRAPSAGRAGLRQ 225


>gi|290994771|ref|XP_002680005.1| predicted protein [Naegleria gruberi]
 gi|284093624|gb|EFC47261.1| predicted protein [Naegleria gruberi]
          Length = 499

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 81/207 (39%), Gaps = 12/207 (5%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E T  I+  K  +           +    L N   +LE        QL +  G + S  +
Sbjct: 3   EITSQIEALKSELSAATESHAIVLNEKTTLQNDIQILENDKNQLSIQLKEIQGHHESLQA 62

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL----- 205
            +         +  +   T +    +       + +LL+A + S ++  T ++NL     
Sbjct: 63  SILEN-----EKQKQGLQTSLSEYEIKIAQNSEQINLLQAQIESLKQVETQLQNLKSENE 117

Query: 206 -FEKNAVSQNDLN-QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             ++ A S  +L  ++E  +     + ++ +H+++  ++ I   Y E+  +    L  + 
Sbjct: 118 QLQQQATSYTELLKKREGELTNQQEKEQQLLHQKEEEIKSIQTKYQESIKKRDVKLNNME 177

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQK 290
            ++++ ++      S+  +L  T EQ+
Sbjct: 178 SEIQELKKALESATSEKNLLNTTIEQQ 204


>gi|212710234|ref|ZP_03318362.1| hypothetical protein PROVALCAL_01293 [Providencia alcalifaciens DSM
           30120]
 gi|212687041|gb|EEB46569.1| hypothetical protein PROVALCAL_01293 [Providencia alcalifaciens DSM
           30120]
          Length = 369

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 66/208 (31%), Gaps = 18/208 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
              S   + + + +V  +    R ++   +   R+   LY+      A +L      ++ 
Sbjct: 88  GFESGQPVKKGQLLVQLNDAVERADLARYQAQYRNAARLYERTRTLSAQHLV-AEAQVDS 146

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +         +   +    QK I +P  G I   Q      Y    + +  +V  ++  
Sbjct: 147 TRAERDMAQGLIQQTQALIAQKAIHAPFDGIIGIRQVH-EGQYLSPGETIASLV-DTQTL 204

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +   +  +    + +G    +    Y +     F A I  IDP+I +            
Sbjct: 205 KLNFSLDEQASPELHQGQVVNLAVDAYPNT---PFPAKITAIDPLIGKS----------- 250

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFT 416
                      ++N +L+ G  A V   
Sbjct: 251 -RTIALQATLDNSNGKLKAGMYANVTVV 277



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 54/166 (32%), Gaps = 5/166 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             GE+     V  + +  SG I K   E+G  + +G  L+   D      +   +   +N
Sbjct: 64  GVGELEAGSQV-LVAAETSGRITKIGFESGQPVKKGQLLVQLNDAVERADLARYQAQYRN 122

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                +  ++    L+ ++ V E   +S   +     G    T + +    I + +  + 
Sbjct: 123 AARLYERTRT----LSAQHLVAEAQVDSTRAERDMAQGLIQQTQALIAQKAIHAPFDGII 178

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                    YL+  +        + L  +   D      L +   V
Sbjct: 179 GIRQVHEGQYLSPGETIASLVDTQTLKLNFSLDEQASPELHQGQVV 224


>gi|167588333|ref|ZP_02380721.1| Secretion protein HlyD family [Burkholderia ubonensis Bu]
          Length = 304

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/231 (11%), Positives = 75/231 (32%), Gaps = 30/231 (12%)

Query: 206 FEKNAVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            +   VS+ D+       +    V ++  ++  +    +              L     +
Sbjct: 62  VDNQRVSKGDILYRIDPQRFALAVEQAEAQVAASAETMRQKQDEARRRTGLDELVPKEDI 121

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +   R +   Q  +   ++ L + +   E+ T+ SP+ G +   +     +YA   +P +
Sbjct: 122 QRSGRAVSIAQAEYRKALAALDVAKLDLERATLRSPVDGYVTQLRLRH-GDYAVAGKPDI 180

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            ++  +   +I       +++H+  G  A ++   +           +  I   I+ ++ 
Sbjct: 181 SVL-DAHSFWITGYFEETKLRHIAAGAPARIKLMGFD----PLLSGHVTSIGRGIADENG 235

Query: 380 NL---------------QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            L               +  +   V +++  +      + L  G    V  
Sbjct: 236 ALDETGLPTVNPNFSWVRLAQRIPVRIELDHV---PAGVLLAAGMTCSVDI 283



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 42/127 (33%), Gaps = 7/127 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN------ 105
              +VV I    SG +    V +  ++ +G  L   +       ++  +  +        
Sbjct: 41  VSAHVVRIAPEVSGTVIDVAVVDNQRVSKGDILYRIDPQRFALAVEQAEAQVAASAETMR 100

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +      ++ LD L  K D+          Q  ++     +      +   +++   + 
Sbjct: 101 QKQDEARRRTGLDELVPKEDIQRSGRAVSIAQ-AEYRKALAALDVAKLDLERATLRSPVD 159

Query: 166 MKLTRMR 172
             +T++R
Sbjct: 160 GYVTQLR 166


>gi|91223266|ref|ZP_01258532.1| hypothetical protein V12G01_05466 [Vibrio alginolyticus 12G01]
 gi|91192079|gb|EAS78342.1| hypothetical protein V12G01_05466 [Vibrio alginolyticus 12G01]
          Length = 376

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 75/232 (32%), Gaps = 23/232 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   ++ +   +K        +  +  + E      +A     Q++ +  +  F++ A +
Sbjct: 99  FEAEVARLEAKVKEASQGALGLESDLREAEAAVLKAQADRDKAQREFSRYQRGFDRGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + DL+ + +    +   L   I +Q+     ++      N + A  L E           
Sbjct: 159 EQDLDTRRQAYKAAEAMLDVAILQQEQAQIALDSEIGGENTQVAQLLAE----------- 207

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
                  L   E   EQ  + +P  G +                 P M  V    +TY  
Sbjct: 208 -------LRKAEFNLEQTVVRAPTDGYVTQLALRPGVMAVPLPLAPAMTFVHTEDITYTA 260

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           A      +Q +K G+ A   F     I  K F+  +  + P I +     + 
Sbjct: 261 A-FRQNSLQRLKPGFEAEFMFRA---IPGKVFRGEVIDVIPAIGESQIQARG 308



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 48/147 (32%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-----NLRCHIDTEKSALDF 119
           G + +  V+    +  G  L   + +     +   +  +K      L    D  ++    
Sbjct: 72  GRVVEVPVQANQPLKTGDILFKIDPVPFEAEVARLEAKVKEASQGALGLESDLREAEAAV 131

Query: 120 LNNKYDVLEKAFE-SREEQLLD---FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           L  + D  +   E SR ++  D   F  +   T  + +    + +  ++  +     ++ 
Sbjct: 132 LKAQADRDKAQREFSRYQRGFDRGAFTEQDLDTRRQAYKAAEAMLDVAILQQEQAQIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                   + + L A L   + +L   
Sbjct: 192 SEIGGENTQVAQLLAELRKAEFNLEQT 218


>gi|119195365|ref|XP_001248286.1| hypothetical protein CIMG_02057 [Coccidioides immitis RS]
          Length = 1614

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 77/217 (35%), Gaps = 12/217 (5%)

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD----FLNNKYDVLEKAFESRE 135
            G  +         D    +           DTE+ +L+     L ++   L+   +   
Sbjct: 775 AGDSIFERSASRAQDRSASRASDGTRASRMSDTERESLETKNGELRDQVSTLKLENQGLR 834

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            QL +++ +  +           +      ++L R ++I+L     E + + L+ L +  
Sbjct: 835 AQLDEYMSEIETMDRAYQEDMDQAEEEVQTLQLERDQAIHL----AEEREAELQDLKAEA 890

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+++  +++  +   +  ++  + E  +      LR    E ++    I  L ++A    
Sbjct: 891 QEEINALEDELD---LKTDEGQRMEAELRNQQENLRALQAEMRSANEGILRLEEDAQNNL 947

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
             Y   + ++LE   R        L       ++ T+
Sbjct: 948 QKYKA-VQQELEDANRELEALEKNLFESNSKIQRLTV 983



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 75/222 (33%), Gaps = 16/222 (7%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVS--IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
                 +L  E+    +L   K V   +++    ++  +  L   N+K   L    ES + 
Sbjct: 931  SANEGILRLEEDAQNNLQKYKAVQQELEDANRELEALEKNLFESNSKIQRLTVQLESSQN 990

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            ++     +  +   K+ +         + ++  R ++  L+    E +           Q
Sbjct: 991  EIAFLREEQDADKIKIGDLESDLKTTQINLQSERDQTRELDCRLAEERHQREVVGGKEKQ 1050

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--------------LRENIHEQKNMLR 242
            +   +M  L  +N  +++++ + ++ +    +E              LRE + +      
Sbjct: 1051 EVQRIMNELNRENTGAKDEIRKLKKALSAREIEANTWKERLFELESSLREALGDLNGTRS 1110

Query: 243  HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
             +     +   E  +   E+    E      A   ++  +LE
Sbjct: 1111 SLLLSITKLQKELESTTLELQSARETLDEKEALLRNRDALLE 1152



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 27/246 (10%), Positives = 76/246 (30%), Gaps = 39/246 (15%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD-------------- 118
            ++  +I  G      +  +    +  ++   + L C +  E+   +              
Sbjct: 999  QDADKIKIGDLESDLKTTQI--NLQSERDQTRELDCRLAEERHQREVVGGKEKQEVQRIM 1056

Query: 119  -FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
              LN +    +      ++ L     + ++   ++F    SS+  +L        S+ L+
Sbjct: 1057 NELNRENTGAKDEIRKLKKALSAREIEANTWKERLFELE-SSLREALGDLNGTRSSLLLS 1115

Query: 178  RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV----------SQNDLNQQERIVYKST 227
               L+ +       L S ++ L   + L                  ++L ++ER  +++ 
Sbjct: 1116 ITKLQKELESTTLELQSARETLDEKEALLRNRDALLESHGLETRKLSELLERERQAHRAD 1175

Query: 228  L-----------ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
                        +    I +    +  +     +    F+   ++    L +    F   
Sbjct: 1176 KHSFEQALKSHHQASRTIAQSNTRISDLEHARGQDRKRFSTLEQQYKDQLNERNAMFLAI 1235

Query: 277  MSKLTI 282
              +L++
Sbjct: 1236 WKRLSV 1241


>gi|37525460|ref|NP_928804.1| hypothetical protein plu1509 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36784888|emb|CAE13802.1| Membrane Fusion Protein (MFP) YbhG [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 330

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 46/354 (12%), Positives = 104/354 (29%), Gaps = 88/354 (24%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +   QV+ G  I     +   ++   T+       ++   +   D+ K+ L  +   
Sbjct: 52  GGKLASLQVDEGDTIAANQVIGQLDNGPFTN-------ALNKAKATRDSTKARLAMMEEG 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y   E                                       + ++RS    R     
Sbjct: 105 YRTEE---------------------------------------IAQVRSEVAQR----- 120

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 A            + L++   +S N+L+  +    ++                 
Sbjct: 121 -----EAAWHFANSFFKRQQGLWQSKVISANELDDAKTNHNQAL--------------AA 161

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +    D+ N     Y KE   ++ + +   A   + +   E   +   + SP +GTI+  
Sbjct: 162 LQAAKDKLNQFETGYRKE---EIAEAKGQLAQAEAAVAQAELDLQDTQLTSPSSGTILT- 217

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++            +  +   +   ++RA +    +     G    + +      ++K +
Sbjct: 218 RAIEPGTMLSAGNTVFTLS-LTDPVWVRAYIAESHLGQATPGRE-ILLYT--DSRKDKPY 273

Query: 364 KAIIEKIDPIIS-----QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
              I  + P         +  +L+T   Y + + +TD   +     LR G P  
Sbjct: 274 HGKIGFVSPTAEFTPKNVETPDLRTDLVYRLRIIVTDPDDA-----LRQGMPVT 322


>gi|302851847|ref|XP_002957446.1| hypothetical protein VOLCADRAFT_98490 [Volvox carteri f. nagariensis]
 gi|300257250|gb|EFJ41501.1| hypothetical protein VOLCADRAFT_98490 [Volvox carteri f. nagariensis]
          Length = 4518

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 63/209 (30%), Gaps = 2/209 (0%)

Query: 83   PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
             L+ +  + +    +        LR  ++  + A+  ++ + + +        EQL +  
Sbjct: 3420 VLIAWHLVASRAAGERGIEEALELRRALERNEGAMRQVSARLEAVGAESAELLEQLKEAQ 3479

Query: 143  GKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             +      ++      +     +L      + +         +K + L A        + 
Sbjct: 3480 SEVLVLRQQLSESEKRLGEAMEALATAERELEAQGAGLATRADKIASLEAERDMLLDRVN 3539

Query: 201  MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             ++       VS   L +Q   + ++    +  + E    ++     Y+E  L   +   
Sbjct: 3540 TLRQQVSSGEVSVASLQEQASSLQRTLAAAQGTVKELNLKMQQQAAHYEEQLLAARDEAS 3599

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQ 289
               R+      T +    + T  E     
Sbjct: 3600 LARREAGSLAATASRLEQQATDSEAQLRA 3628



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/224 (10%), Positives = 66/224 (29%), Gaps = 9/224 (4%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE-KSALDFLNNKYDVLEKAFESREEQ 137
             Q   L T    +   L       ++ +R  + ++ ++ L        VL      + E 
Sbjct: 2667 QQRDTLRTEHAAQLASLHAEHTKQMEAMRAELTSQIETLLAERKTVSQVLRDEHAMQLEA 2726

Query: 138  LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM-----RSIYLNRLDLENKSSLLRALL 192
            +        +  +      +  +      ++ R+         + R     +++ LRA  
Sbjct: 2727 IRAGHASQLTAQNAEHAKQLEMLRAEHAKQMQRLLLEHAAQPEVIRAGYSTQAAALRAEH 2786

Query: 193  SSHQKDLTMMKN--LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYD 249
            +   + L       L +K  +        E+ + +     ++ + +     R  +     
Sbjct: 2787 AMQMEALRAEHAAVLADKERLRAVAAAAHEQQLQELRTGHQKRVEDLAAQTRERLQRQEA 2846

Query: 250  EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            E     A  +++    L ++ R   + +++              
Sbjct: 2847 EQRAAMAAVMEDHQAQLARHTRRLDELLARHKQQLDELADANRR 2890



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 29/262 (11%), Positives = 74/262 (28%), Gaps = 30/262 (11%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCH------------------IDTEKSALDFL--- 120
              LL     +   +       +  LR                    +  E++AL      
Sbjct: 2515 EVLLAERATQPEAMRAEHASQLAALRAEHAKQMEILRSEHAKEVGVLLAERAALPEALRA 2574

Query: 121  --NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                + + +     +R   L         T        + ++     ++    ++ +   
Sbjct: 2575 EHAAQLEGIRSEHAARLGALRADHATQMETMRASHAAQLGALLAERVIQPDAFKAEHAVE 2634

Query: 179  LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE--RIVYKSTLELRENIHE 236
            L    ++   + + +   +    M+ L E+ A+ Q D  + E    +     E  + +  
Sbjct: 2635 L-AALRADHAKQMEAMRAEHGKQMEELAEERAMQQRDTLRTEHAAQLASLHAEHTKQMEA 2693

Query: 237  QKNML-RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
             +  L   I  L  E          E +  LE  +   A +++     E  ++ + + + 
Sbjct: 2694 MRAELTSQIETLLAERKTVSQVLRDEHAMQLEAIRAGHASQLTAQN-AEHAKQLEMLRAE 2752

Query: 296  IAGTIVYNQS--FSSSNYAQQS 315
             A  +        +     +  
Sbjct: 2753 HAKQMQRLLLEHAAQPEVIRAG 2774



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 69/238 (28%), Gaps = 43/238 (18%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
             +   L     + ++ LR            L +K  +   A  + E+QL +    +    
Sbjct: 2777 TQAAALRAEHAMQMEALRAEHAA------VLADKERLRAVAAAAHEQQLQELRTGHQKRV 2830

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSI-YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              +       + R    +   M ++   ++  L   +  L  LL+ H++ L     L + 
Sbjct: 2831 EDLAAQTRERLQRQEAEQRAAMAAVMEDHQAQLARHTRRLDELLARHKQQLD---ELADA 2887

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY-------------------- 248
            N   +  L +  R   K   E R             +E                      
Sbjct: 2888 N---RRQLEEVRRQGEKLLAEGRSAAERGGAEAAAAHEKAVAELAGRLRSAEAARASAEA 2944

Query: 249  -----DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK-----TREQKTILSPI 296
                 + A       L E+   L + +   ++   +   LE       R  + +L+P 
Sbjct: 2945 ARREGEAARAALQTQLDEVLTQLGKERTVGSELRGRNQALEVAEIEIRRRMQGLLAPQ 3002



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/188 (10%), Positives = 59/188 (31%), Gaps = 11/188 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                 L+ +  + LR     E+               A      +L   L    ++ S +
Sbjct: 1983 RAAGRLQPIEEQLLRNRAIQEQITRLGEQLAGTAASAASLELPPELAATLAGLATSSSPL 2042

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
             +  + ++ + L        ++    +  + +  +L+  L    +    +++   +   +
Sbjct: 2043 PSGSLRALEQQLVAMTLEKEAVERLLVQEQAEVRMLQQELGVMAQVTAALEDTQAQLQEA 2102

Query: 213  QNDLNQQERIVYKSTLELRENI-----------HEQKNMLRHINELYDEANLEFANYLKE 261
            +  +  Q++ + +   +L  +             EQK +   +  +      +F      
Sbjct: 2103 RLAVAHQQQELQERDQQLAASRQREVQLMEELAAEQKRVASQVVAIASYFEQQFEETRAA 2162

Query: 262  ISRDLEQN 269
            I  +L+  
Sbjct: 2163 IVAELQDQ 2170


>gi|300115422|ref|YP_003761997.1| RND family efflux transporter MFP subunit [Nitrosococcus watsonii
           C-113]
 gi|299541359|gb|ADJ29676.1| efflux transporter, RND family, MFP subunit [Nitrosococcus watsonii
           C-113]
          Length = 418

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 80/227 (35%), Gaps = 13/227 (5%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE--KSALDFLNNKY 124
           +++ +VE G  + +G  L+  ++ E       ++  +K +   I +E  +   D    K+
Sbjct: 82  VQEVKVEEGDLVRRGQLLVQLDEQEVKLEWMQRQADLKEIEAFIASEKVRHTHDLKALKH 141

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN- 183
           +    A   R  +  + L +   T   V +    +  R       R+ +I  ++  L   
Sbjct: 142 EKSLLALSRRAVERAEILEQRKLTPRSVLDEAQQAAGRQALELNNRLLAIDDHQARLAQL 201

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K+  LRA     Q  L + +         +         +    +   + +     +L  
Sbjct: 202 KARQLRAQALLDQAKLDLERTRITSPYTGR---------IASVAIAAGDRVQSGDELLEI 252

Query: 244 INELYDEANLEF-ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +    E   +  ++Y  +I + L QN    A      + L  + ++
Sbjct: 253 YDTDALEVRAQIPSSYAGQIRKALAQNVPLRAAAKVDGSALLFSLDR 299


>gi|288802557|ref|ZP_06407996.1| putative ATPase involved in DNA repair [Prevotella melaninogenica
           D18]
 gi|288335085|gb|EFC73521.1| putative ATPase involved in DNA repair [Prevotella melaninogenica
           D18]
          Length = 1215

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 73/221 (33%), Gaps = 19/221 (8%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH-STCSK 151
              +  ++  ++     I + +  L         L+   E   +   D   +        
Sbjct: 665 RQNLQNQRHKLEMEEQEIISSEQELRMRAFNDATLKVEAEKERQAKNDAKNEKDLKELDA 724

Query: 152 VFNYGISSVYRSLKMKLTRMR-SIYLNRLDLENKSSLLRAL--------------LSSHQ 196
            FN  + ++   L     + +    L+  + EN+ + L                 L+ ++
Sbjct: 725 AFNRSVKALNNELHAFQEQQKTESELHNQEFENQKAQLDKQQKAELEGKGVDIKLLNEYR 784

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVY---KSTLELRENIHEQKNMLRHINELYDEANL 253
           K L  +  L ++    +ND+ + E  V       +++R NI E    L  + + Y++  +
Sbjct: 785 KALDELNKLLQQIETDRNDVIKYEDAVETLFSKEVDIRNNIKEIGQRLIMLQQRYEDKRI 844

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                 +         Q+  A     L    +  E + ++S
Sbjct: 845 RIEKKKQAFEDQQRAIQKDLAHRRDGLNQYHQVIENEHLVS 885


>gi|237807165|ref|YP_002891605.1| secretion protein HlyD family protein [Tolumonas auensis DSM 9187]
 gi|237499426|gb|ACQ92019.1| secretion protein HlyD family protein [Tolumonas auensis DSM 9187]
          Length = 318

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 46/146 (31%), Gaps = 11/146 (7%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E + V I +P +G +++  V  G  +  G PL   E  E +        ++K  +    
Sbjct: 28  VEGDYVRIATPVAGYLRELAVTEGQPVQTGQPLFRLESSEVSSNQQTALATLKKAQAQAA 87

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                           +++ E    +      +     S+        + +        +
Sbjct: 88  DLSKG-----------KRSEEITALEAQLGAAQAALRLSEQELSRQQRLRQQGFSNQATL 136

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQK 197
                +RL  + K   L+A LS   +
Sbjct: 137 DQAASSRLQAQGKVRDLKAQLSLASQ 162


>gi|152981910|ref|YP_001352754.1| multidrug efflux system transmembrane protein [Janthinobacterium
           sp. Marseille]
 gi|151281987|gb|ABR90397.1| multidrug efflux system transmembrane protein [Janthinobacterium
           sp. Marseille]
          Length = 570

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 53/134 (39%), Gaps = 3/134 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+++G +   + V ++ +  SG +KK  +E GS + +G  L   +       +D ++  +
Sbjct: 63  VTATGTVQPLEYV-DVGAQVSGQLKKLYIEVGSVVKEGDLLAEIDPTVFLATVDARRAGL 121

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +N    +   +S L     +Y+  +    +             +  S      I ++   
Sbjct: 122 RNQLATMKDRESQLALATLQYNRQKNLMAADATTTESLQTAEATLRSA--KAQIDALQAQ 179

Query: 164 LKMKLTRMRSIYLN 177
           ++   + +R+   N
Sbjct: 180 IEQTQSTLRADEAN 193



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 108/318 (33%), Gaps = 22/318 (6%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDV-----LEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             LR  + + ++ + FL            +K +  ++ + +  + +      +       
Sbjct: 8   AGLRQRLFSRRALIAFLIVLLAAGGYWGWKKFYGKKDPREIYQVAEVQRGDIQDLVTATG 67

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           +V     + +    S  L +L +E  S +    L +       +  +  + A  +N L  
Sbjct: 68  TVQPLEYVDVGAQVSGQLKKLYIEVGSVVKEGDLLAEIDPTVFLATVDARRAGLRNQLAT 127

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +    +S L L    + ++  L   +    E+       L+     ++  Q       S
Sbjct: 128 MKD--RESQLALATLQYNRQKNLMAADATTTESLQTAEATLRSAKAQIDALQAQIEQTQS 185

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTP 336
            L   E       I +P+ GT+V   +         +Q    I+  +      ++ +V+ 
Sbjct: 186 TLRADEANLNYAKIYAPMDGTVVSLTAR-QGQTLNANQTAPTILRIADLSTMTVQTQVSE 244

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
            ++  ++KG    V F      + +++   + K++P  +  +N +     Y  +  +   
Sbjct: 245 AEVGKLRKGM--EVYFTTLG-SQGRRWYGALRKVEPTPTVTNNVVL----YNALFDVP-- 295

Query: 397 AFSDNNIELRNGFPAEVL 414
              + N  L      +V 
Sbjct: 296 ---NKNQALMPSMTTQVF 310


>gi|145519213|ref|XP_001445473.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412928|emb|CAK78076.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1636

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 12/211 (5%)

Query: 84   LLTFEDIETTDLIDLKKVSI----KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            LL  E        +  +       + L   ++  K  L  +N+++ + +K    RE  L 
Sbjct: 1090 LLENEKTRKEQQFEQSRKEWQEEKRELIDRLEETKQRLQKMNDEF-LEKKIEYGRETALT 1148

Query: 140  DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ-KD 198
                ++     +     I +       K+ + ++ Y   ++LE K    +   ++ + K 
Sbjct: 1149 QQQNEFLQKKIEDLQKQIDTQQSRFDEKIKQQKNEYS--VELEQKLERAQEEKTAIETKY 1206

Query: 199  LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              + K L E         N+Q   + +    L E + +  +    +     + +   A Y
Sbjct: 1207 EKIKKQLKENEY----QYNKQASTLEREKAILTEKLGQLDSRKNELESKIKDESASVAQY 1262

Query: 259  LKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               +   +   +++   E+ K        EQ
Sbjct: 1263 QTALREQIAAEKKSLQQELEKYKQFNLQLEQ 1293



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 68/197 (34%), Gaps = 9/197 (4%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           T  + +LK   +K    + D E++ L        +  +LE+     E+ + +   K    
Sbjct: 565 TRQIQELKGQVLKAEEFNKDMERNTLFGNSEFEKERALLEQKITFFEKLVNEMNAKEVDY 624

Query: 149 CSKVFNYGISSVYRSLKMKLTR---MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            +++ N       +S   +      +R +     DL+ K + +   L   + +       
Sbjct: 625 QNEIKNLRKEHSLQSKDQQTKSDQTVRQLQQKLSDLQEKLNEMENELIEKESNFENDFKK 684

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           FE     +  L +Q     +    L   I E K     + ++         N L E  + 
Sbjct: 685 FEHK---ERSLTKQNLEQNEQIQALTREIREYKRNEEQMQQMLKSDANNQVNELLEKVQG 741

Query: 266 LEQNQRTFADEMSKLTI 282
           LE   +T  D++ +   
Sbjct: 742 LEDLIKTKDDQLKQAKS 758


>gi|4778|emb|CAA38253.1| Uso1 protein [Saccharomyces cerevisiae]
          Length = 1790

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 94/226 (41%), Gaps = 20/226 (8%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            ++ +    L  E I+        K  + +LR ++++ +   + L  +    E+   ++E 
Sbjct: 1114 EVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKER 1173

Query: 137  QLLDFLGKYHS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            Q  + + + +   T ++  N  I      L+ ++  M+S    + +L  K S + AL   
Sbjct: 1174 QYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNL--KKSEIDALNLQ 1231

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-- 252
                   +K L +KN  ++  L +  + V   T++++E   E     + ++EL D+    
Sbjct: 1232 -------IKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKAS 1284

Query: 253  -------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                   LE     ++I  +L+        ++ K+T L K +E+  
Sbjct: 1285 EDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSE 1330



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 11/203 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            ++    D  +  I  L+  ++T  +A D   NK   L K  E  E +L  +    +   +
Sbjct: 1044 KSDSSKDEYESQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELET 1103

Query: 151  KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH---QKDLTMMKNL 205
            K+      +  V  + +        +     + + + + LRA L S     +DL      
Sbjct: 1104 KLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKK 1163

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +E+   ++      ER   +   +L + I   +     I +  DE   E           
Sbjct: 1164 YEEQIANK------ERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQ 1217

Query: 266  LEQNQRTFADEMSKLTILEKTRE 288
                +        ++  L+K  E
Sbjct: 1218 SNLKKSEIDALNLQIKELKKKNE 1240


>gi|15597626|ref|NP_251120.1| hypothetical protein PA2430 [Pseudomonas aeruginosa PAO1]
 gi|9948476|gb|AAG05818.1|AE004670_6 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
          Length = 334

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 91/263 (34%), Gaps = 34/263 (12%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI--HEQKNML 241
           +   L   +   + +L +++     N V++  L +    +  S  +LR+     ++++ L
Sbjct: 69  EKGELLLSIDPARYELAVLRAERAVN-VARAALGESRAAIEASQAQLRQRRSEAQRRSAL 127

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTF-------ADEMSKLTILEKTREQKTILS 294
           +  + L  E N +    +     +L +NQ +            + L       E+  + +
Sbjct: 128 QKRSMLSVEENEKAQTDVSLAQAELLRNQASLGLAQANVELAEAALQQARLDLERTQVRA 187

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P++G +   Q+    +YA    PL+ +V      Y+       ++  +  G  A V    
Sbjct: 188 PVSGYVTNLQTR-EGDYAHAGVPLLALV-DRDSFYVSGYFEETKLPGIHVGSRARVELMS 245

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQT------QEYYE---------VILKITDLAFS 399
                 ++F   ++ I   I+ ++N   +         Y          V + I      
Sbjct: 246 -----GERFDGRVQSIAHAITDRENAEGSRLLANINPSYTWVKLAQRIPVRIAIDPAYRQ 300

Query: 400 DNNIELRNGFPAEVLFTAKNTTL 422
            N   LR G  A +       T 
Sbjct: 301 RN--TLRAGVTATIRVLPAEDTA 321



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 50/145 (34%), Gaps = 2/145 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV + +  SG+I +  + +   + +G  LL+ +       +   + ++   R  + 
Sbjct: 42  VRADVVTLSADVSGLITRLPLSDNQPVEKGELLLSIDPARYELAVLRAERAVNVARAALG 101

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++A++   ++  + ++  E++    L          ++     +S     L      +
Sbjct: 102 ESRAAIE--ASQAQLRQRRSEAQRRSALQKRSMLSVEENEKAQTDVSLAQAELLRNQASL 159

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQ 196
                N    E      R  L   Q
Sbjct: 160 GLAQANVELAEAALQQARLDLERTQ 184


>gi|332558230|ref|ZP_08412552.1| RND family efflux transporter MFP subunit [Rhodobacter sphaeroides
           WS8N]
 gi|332275942|gb|EGJ21257.1| RND family efflux transporter MFP subunit [Rhodobacter sphaeroides
           WS8N]
          Length = 390

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 84/244 (34%), Gaps = 27/244 (11%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE + S   A L+S +  +   +    +   ++   ++ ER V + T +LR+     +  
Sbjct: 98  LELQKSQFTASLASARATIAQAE---AQVLEAKASADEAER-VNRRTAQLRQQGAASQAA 153

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                     AN           + LE  +   A   ++L  +E    + ++++P+AG I
Sbjct: 154 ADTAQAASVSANARVMV----ARQTLEAARAQVALAEAQLANIELQLNRTSVVAPVAGEI 209

Query: 301 VYNQSFSSSNYAQQ-SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           V  ++      A    +P+  ++       + A V  + +  ++ G T  +R        
Sbjct: 210 VS-RTAKVGAIASAQGEPMFTLL-RDGQLELFADVAEQDLLRLRPGQTVLIR----TLGA 263

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +  +  +  ++P I                + I       +   +R+G  AE       
Sbjct: 264 AEPLEGTVRLVEPTIDTATRLG------RARIAI------GHREAVRSGMFAEAEILVSE 311

Query: 420 TTLA 423
               
Sbjct: 312 RDAL 315



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 73/244 (29%), Gaps = 7/244 (2%)

Query: 44  VSSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V +SG I   + V  ++       I+  + + G  + +G  L                 S
Sbjct: 50  VIASGLIGAVELVQ-VQPLIEGQPIETLEADVGDTVAEGQVLARLSVSTLELQKSQFTAS 108

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           + + R  I   ++ +       D  E+    R  QL        +         +S+  R
Sbjct: 109 LASARATIAQAEAQVLEAKASADEAERVNR-RTAQLRQQGAASQAAADTAQAASVSANAR 167

Query: 163 SLKMKLT---RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            +  + T       + L    L N    L            ++    +  A++       
Sbjct: 168 VMVARQTLEAARAQVALAEAQLANIELQLNRTSVVAPVAGEIVSRTAKVGAIASAQGEPM 227

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
             ++    LEL  ++ EQ  +     +      L  A  L E +  L +     A  + +
Sbjct: 228 FTLLRDGQLELFADVAEQDLLRLRPGQTVLIRTLGAAEPL-EGTVRLVEPTIDTATRLGR 286

Query: 280 LTIL 283
             I 
Sbjct: 287 ARIA 290


>gi|312959068|ref|ZP_07773587.1| secretion protein HlyD [Pseudomonas fluorescens WH6]
 gi|311286838|gb|EFQ65400.1| secretion protein HlyD [Pseudomonas fluorescens WH6]
          Length = 388

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 50/141 (35%), Gaps = 7/141 (4%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS  G +L   + V I+    GI+ +  V+ G  +  G  L + +D      +D  K  +
Sbjct: 54  VSGIGTVL-SLHSVVIRPQVDGILTQVLVKEGQLVKAGDLLASIDDRSIRASLDQAKAQL 112

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +      +  +N K        +   +Q  D      +          +++  +
Sbjct: 113 GESQAQLQ-----VALVNLKRYKQLSVDDGVSKQTYDQQQALVNQLKATAQGNQAAIDAA 167

Query: 164 LKMK-LTRMRSIYLNRLDLEN 183
                 T++RS    R+ + N
Sbjct: 168 KVQLSYTQIRSPVSGRVGIRN 188


>gi|224537706|ref|ZP_03678245.1| hypothetical protein BACCELL_02588 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520682|gb|EEF89787.1| hypothetical protein BACCELL_02588 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 366

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 84/249 (33%), Gaps = 28/249 (11%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNML 241
             S ++  L     + +   + + +   + +   LN  E  V     EL     E     
Sbjct: 66  QISGIIDELYKEAGQTIRKGEVIAKVKVIPELGTLNSAESRV--RLAELNAKQGET--DF 121

Query: 242 RHINELYDEANLEFANY------LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
             I +L+++  +    Y      +K++  +L+  +         +T    +     I S 
Sbjct: 122 ARIEKLFEDKLISREEYEKAEVSVKQVREELQTAKDNLEIVKEGITKSSASFSSTLIRST 181

Query: 296 IAGTIVYNQSFSSSNYA-----QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           I G I+     + ++            +  +   +     R K+   ++  V +G    +
Sbjct: 182 IDGLILDVPVKAGNSVIMSNTFNDGTTIATVANMND-LIFRGKIDETEVGRVHEGMPVKL 240

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
                 ++    F AI+E I P   +++   Q +   +  +++ D         +R+G+ 
Sbjct: 241 TIGALQNL---SFDAILEYISPKGVEENGANQFEI--KAAIQVPDTVM------IRSGYS 289

Query: 411 AEVLFTAKN 419
           A      + 
Sbjct: 290 ANAEIVLER 298



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 48/130 (36%), Gaps = 3/130 (2%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            +  +E +  ++G++   D +  IK   SGII +   E G  I +G  +   + I     
Sbjct: 41  TVADLEKTTVATGKVEPRDEI-LIKPQISGIIDELYKEAGQTIRKGEVIAKVKVIPELGT 99

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++  +  ++     ++ ++   DF   +    +K     E +  +   K      +    
Sbjct: 100 LNSAESRVR--LAELNAKQGETDFARIEKLFEDKLISREEYEKAEVSVKQVREELQTAKD 157

Query: 156 GISSVYRSLK 165
            +  V   + 
Sbjct: 158 NLEIVKEGIT 167


>gi|297466738|ref|XP_614439.5| PREDICTED: hypothetical protein isoform 4 [Bos taurus]
 gi|297476007|ref|XP_002688404.1| PREDICTED: hypothetical protein [Bos taurus]
 gi|296486462|gb|DAA28575.1| hypothetical protein BOS_6825 [Bos taurus]
          Length = 1117

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 83/241 (34%), Gaps = 24/241 (9%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
              + S   G++++ +          + L+ FE+     + +   +S  + R        
Sbjct: 176 RKMVLSHE-GVLQEIR----------SVLVDFEEASGKKVFEHDSMSTIHSRNMASAISK 224

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            L  L+ +   L+      E+QL     +  +    +       + + +      +  + 
Sbjct: 225 VLRELDTEISYLKGRIFPVEDQLEALKSESQNKMELLLQQHQDRIEQLISEHEAEITGLT 284

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE--- 232
                  ++++ +++ L   Q+      +++ +       L+  E  V +   ELRE   
Sbjct: 285 EKASSARSQANSIQSQLEIIQEQARNQNSMYMR------QLSDLESTVSQLRSELREAKR 338

Query: 233 ----NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                I E +  L   N    EA  E   + +E     +Q Q+  AD   +   L   +E
Sbjct: 339 MYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKE 398

Query: 289 Q 289
           Q
Sbjct: 399 Q 399


>gi|290509450|ref|ZP_06548821.1| multidrug resistance protein A [Klebsiella sp. 1_1_55]
 gi|289778844|gb|EFD86841.1| multidrug resistance protein A [Klebsiella sp. 1_1_55]
          Length = 347

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 77/268 (28%), Gaps = 12/268 (4%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L      + +      D++    L +A ++     L       EK A      N   
Sbjct: 85  RAALAKAAGEVAAQQAALADIQATRQLQQATIAGSAASLLAATAATEKLANDNRRYNALA 144

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELY-DEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                S         + +       +   D+   E    + +  +         A    +
Sbjct: 145 ASSAISAQIRDNASADYRRAHAEQEKAKADKTVAERQLAVLDARQLQTLAALAQAQANLE 204

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           +  L        I +P  G I  N+   S ++      L+ +VP     +I A     Q+
Sbjct: 205 MARL--NLSYTDIRAPFDGVI-GNRRAWSGSFVSSGTQLLSLVPAHG-LWIDANFKENQL 260

Query: 340 QHVKKGYTATVRFPHYADIREKK-----FKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
            H++ G   T+      +   K        A   +   + ++      T+    V ++I 
Sbjct: 261 AHMRAGQPVTIVADVLPNHTFKGHVASLAPATGSRFSILPAENATGNFTKIVQRVPVRIA 320

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNTTL 422
                     LR G    V+ T    + 
Sbjct: 321 LEGDGAKLDVLRPGL--SVIVTVNEKSP 346



 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 48/145 (33%), Gaps = 7/145 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              ++  I S  SG I++  V++   + +G  L+  +D +          ++      + 
Sbjct: 44  VGGDISAISSKVSGYIQQLAVQDNMAVKKGDLLIRIDDRDYRA-------ALAKAAGEVA 96

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +++AL  +     + +         LL          +    Y   +   ++  ++   
Sbjct: 97  AQQAALADIQATRQLQQATIAGSAASLLAATAATEKLANDNRRYNALAASSAISAQIRDN 156

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQ 196
            S    R   E + +     ++  Q
Sbjct: 157 ASADYRRAHAEQEKAKADKTVAERQ 181


>gi|218130030|ref|ZP_03458834.1| hypothetical protein BACEGG_01614 [Bacteroides eggerthii DSM 20697]
 gi|217987750|gb|EEC54077.1| hypothetical protein BACEGG_01614 [Bacteroides eggerthii DSM 20697]
          Length = 342

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 46/376 (12%), Positives = 111/376 (29%), Gaps = 93/376 (24%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           ++ + +   ++    G I++ +  +  Q+ +G  L+  ED E               R  
Sbjct: 48  VVPQSSR--VQ----GFIREVRFADFQQVKKGDTLVIIEDAEF--------------RLR 87

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +   ++ L            +  + +  +        S                      
Sbjct: 88  LAQAETNLIRAEQGSQGTASSIVTTKTSMTVTEAGIESA--------------------- 126

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
                              R  + +  ++ T  K L  ++AV++   ++       +   
Sbjct: 127 -------------------RVQMENAMREDTRFKKLLSQDAVTRQQYDKVHTGYLSAKAA 167

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             + +  ++     + E     +         +S    +  R   D              
Sbjct: 168 YEQAVRSRQMQSAVMTEQGHHLS---------VSEQGIELARRAVDL------ARLNLSY 212

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I++   GT+               Q L+ IV  +   ++ A     Q+ H+K G  A 
Sbjct: 213 CYIIATCNGTVGTKDIH-VGQLVNPGQTLVSIV-DNGERWVEANYKESQLPHIKVGSKAE 270

Query: 350 VRFPHYADIREKKFKAIIEKID----------PIISQQDNNLQTQEYYEVILKITDLAFS 399
           +       I+       +E+I           PI +   N ++ ++   V +K+ + A  
Sbjct: 271 ITADAVPGIQY---TGTVERISDATGSAFSLIPIDNATGNFVKVEQRVTVRIKLNENA-- 325

Query: 400 DNNIELRNGFPAEVLF 415
            +   L++G+  E + 
Sbjct: 326 -DVARLKSGYNVECII 340


>gi|206576647|ref|YP_002238426.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|206565705|gb|ACI07481.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
          Length = 347

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 84/277 (30%), Gaps = 17/277 (6%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +   ++     +  +   +  I   R   +   +   A L +       + N   +  
Sbjct: 82  RDYRAALAKAAGEVAAQQAALADILATRQLQQATIAGSAASLLAATAATEKLANDNRRYN 141

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                     +I   ++ + R    EQ+      ++   E  L   +  +      +Q  
Sbjct: 142 ALAASSAISAQIRDNASADYRRAHAEQEKAKA--DKTVAERQLAVLDARQ------QQTL 193

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A   + L +         I +P  G I  N+   S ++      L+ +VP     +I
Sbjct: 194 AALAQAQANLEMARLNLSYTDIRAPFDGVI-GNRRAWSGSFVSSGTQLLSLVPAHG-LWI 251

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKK-----FKAIIEKIDPIISQQDNNLQTQE 385
            A     Q+ H++ G   T+      +   K        A   +   + ++      T+ 
Sbjct: 252 DANFKENQLAHMRAGQPVTIVADVLPNHTFKGHVASLAPATGSRFSILPAENATGNFTKI 311

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTL 422
              V ++I           LR G    V+ T    + 
Sbjct: 312 VQRVPVRIALEGDGAKLDVLRPGL--SVIVTVNEKSP 346



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 48/145 (33%), Gaps = 7/145 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              ++  I S  SG I++  V++   + +G  L+  +D +          ++      + 
Sbjct: 44  VGGDISAISSKVSGYIQQLAVQDNMAVKKGDLLIRIDDRDYRA-------ALAKAAGEVA 96

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +++AL  +     + +         LL          +    Y   +   ++  ++   
Sbjct: 97  AQQAALADILATRQLQQATIAGSAASLLAATAATEKLANDNRRYNALAASSAISAQIRDN 156

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQ 196
            S    R   E + +     ++  Q
Sbjct: 157 ASADYRRAHAEQEKAKADKTVAERQ 181


>gi|309800042|ref|ZP_07694238.1| periplasmic component of efflux system [Streptococcus infantis
           SK1302]
 gi|308116332|gb|EFO53812.1| periplasmic component of efflux system [Streptococcus infantis
           SK1302]
          Length = 350

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 90/276 (32%), Gaps = 32/276 (11%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKST---L 228
           +     +  +     L  +L S    ++  + L +  +  +Q   +   R V K+     
Sbjct: 67  AQNEQYIYYDASKGDLDEVLVSVGDQVSEGQALVKYSSTEAQAAYDAASRAVAKANRHIN 126

Query: 229 ELRENIHEQKNM----LRHINELYDEANLEFA-NYLKEISRDLEQNQRTFADEMSKLTIL 283
           EL E  +            +     +A  + + +    I   +   +   AD  ++L   
Sbjct: 127 ELNEARNTTAATPSLPQAGLEGATGQAPAQSSGSATAAIDSQISDARDVRADAEAQLEKA 186

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +      T+LS + GT+V      S +    SQ L+ IV  +    ++ +++   + ++ 
Sbjct: 187 QAQLNAATVLSTVEGTVVEVNRNVSKSPTGNSQVLVHIV-SNDNLQVKGELSEYNLANLS 245

Query: 344 KGYTATVRFPHYADIREK--KFKAIIEKID------PIISQQDNNLQTQEYYEVILKITD 395
            G   T     +         +   I  I          S       T   Y   + +T 
Sbjct: 246 VGQEVT-----FTSKVYPDKTWNGKISYISNYPKNNSEASSSLAGSNTGSKYPYTVDVTS 300

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
                   +L+ GF   V   + +      +I PIT
Sbjct: 301 EI-----GDLKQGFTVSVEVKSTSKA----LIVPIT 327



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 41/136 (30%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  SV  SG +  ++          G + +  V  G Q+ +G  L+ +   E     D  
Sbjct: 55  VASSVLLSGTVTAQNEQYIYYDASKGDLDEVLVSVGDQVSEGQALVKYSSTEAQAAYDAA 114

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             ++     HI+    A +       + +   E    Q         +            
Sbjct: 115 SRAVAKANRHINELNEARNTTAATPSLPQAGLEGATGQAPAQSSGSATAAIDSQISDARD 174

Query: 160 VYRSLKMKLTRMRSIY 175
           V    + +L + ++  
Sbjct: 175 VRADAEAQLEKAQAQL 190


>gi|223039906|ref|ZP_03610189.1| MacA [Campylobacter rectus RM3267]
 gi|222878774|gb|EEF13872.1| MacA [Campylobacter rectus RM3267]
          Length = 411

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 58/142 (40%), Gaps = 3/142 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           ++   +  S+ S+GEI     ++++ +  SG IKK  V+ G  +  G  +   +     +
Sbjct: 53  AVRGELIKSIESNGEI-YATELIDVGAQVSGQIKKLYVKLGDVVKAGDMIAEIDGSTQQN 111

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +D KK  +      +++ + AL+   NK+D  ++ +        DF    ++    +  
Sbjct: 112 NVDTKKAQLGIYEAKLNSARVALEIARNKFDREKELYAKNATSKEDFENAKNTLA--INE 169

Query: 155 YGISSVYRSLKMKLTRMRSIYL 176
             +  +   +      + +  +
Sbjct: 170 ASLKEIQAQIIQAKISLSTAQI 191



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 72/205 (35%), Gaps = 13/205 (6%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +++ +Y+   D+     ++  +  S Q++    K        +Q  + + +    +  LE
Sbjct: 83  QIKKLYVKLGDVVKAGDMIAEIDGSTQQNNVDTKK-------AQLGIYEAKLNSARVALE 135

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +  N  +++  L   N    E      N L      L++ Q         L+  +     
Sbjct: 136 IARNKFDREKELYAKNATSKEDFENAKNTLAINEASLKEIQAQIIQAKISLSTAQIDLGY 195

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKKGYT 347
             I++P  G IV  +          +Q    IV  + L+ ++ K  +    I  +K G  
Sbjct: 196 TKIVAPKDGVIVSVRV-EEGQTVNSNQTAPTIVNIADLSKVQLKMEIAEGDITKIKVGSV 254

Query: 348 ATVRFPHYADIREKKFKAIIEKIDP 372
                    D + K    +I  +DP
Sbjct: 255 VEYSILSEPDRKFKT---VISSVDP 276


>gi|187731630|ref|YP_001882127.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Shigella boydii CDC 3083-94]
 gi|187428622|gb|ACD07896.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Shigella boydii CDC 3083-94]
          Length = 355

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 110/381 (28%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHMRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + +   ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAAHTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|295096415|emb|CBK85505.1| RND family efflux transporter, MFP subunit [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 371

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 75/262 (28%), Gaps = 52/262 (19%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           +    ++R +    ++L  + +  +A  +  Q  LT  + L +  A+S+ DL+     + 
Sbjct: 95  EQAQNQIREVEATLMELRAQRAQAQAERNLAQVTLTRQQALAKTQAISKQDLDTAATELA 154

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               ++     + K                                         L   +
Sbjct: 155 VKQAQIGTIDAQIKRNQAS------------------------------------LDTAK 178

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHV 342
              +   I++P+AG +    +          Q   ++ +        ++A+V+   + H+
Sbjct: 179 TNLDYTQIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQVSEADVIHL 237

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G  A          R        E +   I      +    +Y    ++      +  
Sbjct: 238 KPGQKAWFTVLGDPQTRY-------EGVLKDILPTPEKVNDAIFYYARFEVP-----NPQ 285

Query: 403 IELRNGFPAEVLFT-AKNTTLA 423
             LR    A+V         + 
Sbjct: 286 GVLRLDMTAQVHIQLTGVKNVL 307



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 61/177 (34%), Gaps = 8/177 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             ++ +V ++G++     V ++ +  SG +K   VE G ++ +G  L   +  +  + I 
Sbjct: 44  GELQQNVLATGKLDALRKV-DVGAQVSGQLKTLSVEIGDKVKKGQLLGVIDPEQAQNQIR 102

Query: 98  LKKV---SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV-- 152
             +     ++  R     E++       +   L K     ++ L     +     +++  
Sbjct: 103 EVEATLMELRAQRAQAQAERNLAQVTLTRQQALAKTQAISKQDLDTAATELAVKQAQIGT 162

Query: 153 FNYGISSVYRSLKMKLTRMR--SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            +  I     SL    T +    I         + + L+       +    +  L +
Sbjct: 163 IDAQIKRNQASLDTAKTNLDYTQIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLAD 219


>gi|229524878|ref|ZP_04414283.1| hypothetical protein VCA_002487 [Vibrio cholerae bv. albensis
           VL426]
 gi|229338459|gb|EEO03476.1| hypothetical protein VCA_002487 [Vibrio cholerae bv. albensis
           VL426]
          Length = 368

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 21/206 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S   + + + +V   +   R N+   +  L      Y+     FA          ++ + 
Sbjct: 87  SGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKG-SISKESYDEAEA 145

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           ++    + +  L+ T  ++ I +P AG I     F    Y Q       IV     + +R
Sbjct: 146 SYYALSADIESLKATIARREIKAPFAGVIGIRNVF-LGQYLQPGT---DIVRLEDTSVMR 201

Query: 332 AK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
            +  V  + I  +       +    Y       FK  I  I+P +S Q   +Q Q     
Sbjct: 202 LRFTVPQRDISRISLDQEVDIFVDAYPQT---SFKGSISAIEPAVSVQSGLIQVQ----- 253

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
                     +++ +LR+G  A    
Sbjct: 254 ------ADIPNSDGKLRSGMFARANI 273



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 52/138 (37%), Gaps = 1/138 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +   E+G+Q+ +  PL+  +       +   +  +   +   +  K      +   
Sbjct: 78  GVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKGSISK 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  ++A  S      D      +   +      + V     + L +      + + LE+ 
Sbjct: 138 ESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLED- 196

Query: 185 SSLLRALLSSHQKDLTMM 202
           +S++R   +  Q+D++ +
Sbjct: 197 TSVMRLRFTVPQRDISRI 214


>gi|239626315|ref|ZP_04669346.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239516461|gb|EEQ56327.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 557

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 88/249 (35%), Gaps = 21/249 (8%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK---------SAL 117
           I +     G ++  G  +L  +     +  +   + ++  R  ++ EK         +  
Sbjct: 66  IGEILKRPGQKVQAGDTILLLQMERLVEERENLSLELEKARLLLEQEKLSGIPVPRVTEE 125

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM-KLTRMRSIYL 176
                +    ++A E+ +E L +    Y  + + + +  +    R+ +  K    R++  
Sbjct: 126 TLAMQQLAAAKRALEAGQEDLAEAEEDYLFSTADLEHDYVQKKNRTREEVKEDNRRAMKS 185

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMK----NLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            R   E       A +   ++++   +     L  +    + DL + +  + ++  +L +
Sbjct: 186 ARRAYEAARLARDAAVKKAEREVEDRQKKLDKLEAREDAPEEDLERAQLDLERAEEDLED 245

Query: 233 -------NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
                   + E++  +    E Y++ +       +E+ +  E   +   D++       K
Sbjct: 246 IRDGQDLEVEEKRAAMYAAEETYEDIDYGEETAREELRKAYEDAVKAEEDKLKNARDTVK 305

Query: 286 TREQKTILS 294
             E+    S
Sbjct: 306 GLEESLYRS 314


>gi|254427429|ref|ZP_05041136.1| auxiliary transport protein, MFP family, putative [Alcanivorax sp.
           DG881]
 gi|196193598|gb|EDX88557.1| auxiliary transport protein, MFP family, putative [Alcanivorax sp.
           DG881]
          Length = 292

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 65/213 (30%), Gaps = 24/213 (11%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + +  + K+  +L       +          +       +  KE        Q   A   
Sbjct: 78  RYQAALAKADAQLLYQQEALRLAQHQYQRRQELHRSSNNSISKEALES-ASIQAQLAKAN 136

Query: 278 SKLTILEKT-----REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
             L   E+       E+  I +P  GTIV        N+  Q  P++ +V      Y+  
Sbjct: 137 VALAKAERDSANINLERTRIHAPADGTIVNLTL-QQGNFVNQGSPVVSMVKADS-FYVTG 194

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI-- 390
                ++  V  G  A+V          +  +  +  +   I+  +     Q   +V   
Sbjct: 195 YFEETKLPLVHVGQDASVIL----MNGSRTLRGTVTSVGQAIANANTQTDRQLLPQVQQT 250

Query: 391 ---LKIT-------DLAFSDNNIELRNGFPAEV 413
              +++        +L    ++I L  G  A V
Sbjct: 251 FNWVRLAQRIPVHIELESVPDDILLAAGMTATV 283



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/172 (11%), Positives = 56/172 (32%), Gaps = 21/172 (12%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           R     L  + L+ +  I G   W     +     +  V +         ++ +    SG
Sbjct: 2   RQSLRILVTVVLVILALIAGNWVWNYYLYAPWTR-DGKVRAE--------IITLSPDVSG 52

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +++  +E+   + +G PL + +D            ++      +  ++ AL    ++Y 
Sbjct: 53  WVRELNIEDNQSVSRGDPLFSIDDTRYQA-------ALAKADAQLLYQQEALRLAQHQYQ 105

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             ++   S    +     +  S  +++    ++            +    ++
Sbjct: 106 RRQELHRSSNNSISKEALESASIQAQLAKANVALAKAERDSANINLERTRIH 157


>gi|254372029|ref|ZP_04987522.1| HlyD family secretion protein [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151569760|gb|EDN35414.1| HlyD family secretion protein [Francisella novicida GA99-3549]
          Length = 321

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 87/247 (35%), Gaps = 31/247 (12%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           D       +L   +  +      + E++    G Y      +F      + + L +  ++
Sbjct: 27  DASFERDAYLYANFTRVNSVESGQVEKIYIKKGSYVKKGDTLFELDCRYITKELNILKSQ 86

Query: 171 MRSIYLNRLDL-------ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            + I L   D+       E +  L +  L   +++    K+L ++ AVS    +Q E+ +
Sbjct: 87  EKKIALELKDIVIKIKLAEKQKDLAKDSLIVEKRNFERYKDLIKEGAVSAQQKDQAEKNL 146

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             S           ++     ++  D   +   + L +                SK+   
Sbjct: 147 ITS-----------ESQFVKTSQNVDNLKIRQNDLLSDQKV-----------TQSKIDQK 184

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           + +  + ++ +   G I  N      ++ +Q Q L  IV  +   Y+ A V    I+++ 
Sbjct: 185 QYSLSRCSVKATTNGYI-SNFILEEGDFIKQGQDLFSIV-DTDKWYVVANVKESNIKYLS 242

Query: 344 KGYTATV 350
            G   T+
Sbjct: 243 VGQIVTM 249


>gi|121591312|ref|ZP_01678603.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|147673467|ref|YP_001218437.1| hypothetical protein VC0395_A2553 [Vibrio cholerae O395]
 gi|153217339|ref|ZP_01951090.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|227080398|ref|YP_002808949.1| hypothetical protein VCM66_0164 [Vibrio cholerae M66-2]
 gi|229507020|ref|ZP_04396528.1| hypothetical protein VCF_002244 [Vibrio cholerae BX 330286]
 gi|229509397|ref|ZP_04398880.1| hypothetical protein VCE_000797 [Vibrio cholerae B33]
 gi|229516344|ref|ZP_04405792.1| hypothetical protein VCC_000358 [Vibrio cholerae RC9]
 gi|229527318|ref|ZP_04416711.1| hypothetical protein VCG_000384 [Vibrio cholerae 12129(1)]
 gi|229606535|ref|YP_002877183.1| hypothetical protein VCD_001444 [Vibrio cholerae MJ-1236]
 gi|254227139|ref|ZP_04920679.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|254851293|ref|ZP_05240643.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255743984|ref|ZP_05417938.1| probable RND efflux membrane fusion protein [Vibrio cholera CIRS
           101]
 gi|262147166|ref|ZP_06027973.1| probable RND efflux membrane fusion protein [Vibrio cholerae INDRE
           91/1]
 gi|262167401|ref|ZP_06035109.1| probable RND efflux membrane fusion protein [Vibrio cholerae RC27]
 gi|298501308|ref|ZP_07011104.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|121546829|gb|EAX56992.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|124113640|gb|EAY32460.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|125620336|gb|EAZ48730.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|146315350|gb|ABQ19889.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227008286|gb|ACP04498.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227012023|gb|ACP08233.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229335326|gb|EEO00810.1| hypothetical protein VCG_000384 [Vibrio cholerae 12129(1)]
 gi|229346770|gb|EEO11740.1| hypothetical protein VCC_000358 [Vibrio cholerae RC9]
 gi|229353712|gb|EEO18649.1| hypothetical protein VCE_000797 [Vibrio cholerae B33]
 gi|229356125|gb|EEO21044.1| hypothetical protein VCF_002244 [Vibrio cholerae BX 330286]
 gi|229369190|gb|ACQ59613.1| hypothetical protein VCD_001444 [Vibrio cholerae MJ-1236]
 gi|254846998|gb|EET25412.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738249|gb|EET93640.1| probable RND efflux membrane fusion protein [Vibrio cholera CIRS
           101]
 gi|262024203|gb|EEY42896.1| probable RND efflux membrane fusion protein [Vibrio cholerae RC27]
 gi|262031390|gb|EEY49997.1| probable RND efflux membrane fusion protein [Vibrio cholerae INDRE
           91/1]
 gi|297539968|gb|EFH76033.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|327483060|gb|AEA77467.1| Probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           cholerae LMA3894-4]
          Length = 368

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 21/206 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S   + + + +V   +   R N+   +  L      Y+     FA          ++ + 
Sbjct: 87  SGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKG-SISKESYDEAEA 145

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           ++    + +  L+ T  ++ I +P AG I     F    Y Q       IV     + +R
Sbjct: 146 SYYALSADIESLKATIARREIKAPFAGVIGIRNVF-LGQYLQPGT---DIVRLEDTSVMR 201

Query: 332 AK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
            +  V  + I  +       +    Y       FK  I  I+P +S Q   +Q Q     
Sbjct: 202 LRFTVPQRDISRISLDQEVDIFVDAYPQT---SFKGSISAIEPAVSVQSGLIQVQ----- 253

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
                     +++ +LR+G  A    
Sbjct: 254 ------ADIPNSDGKLRSGMFARANI 273



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 52/138 (37%), Gaps = 1/138 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +   E+G+Q+ +  PL+  +       +   +  +   +   +  K      +   
Sbjct: 78  GVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKGSISK 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  ++A  S      D      +   +      + V     + L +      + + LE+ 
Sbjct: 138 ESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLED- 196

Query: 185 SSLLRALLSSHQKDLTMM 202
           +S++R   +  Q+D++ +
Sbjct: 197 TSVMRLRFTVPQRDISRI 214


>gi|78043593|ref|YP_359724.1| putative lipoprotein [Carboxydothermus hydrogenoformans Z-2901]
 gi|77995708|gb|ABB14607.1| putative lipoprotein [Carboxydothermus hydrogenoformans Z-2901]
          Length = 249

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 64/178 (35%), Gaps = 16/178 (8%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            KN L       + A L++     +     +Q +       +++ + +   E+  I SP+
Sbjct: 76  LKNQLEAARANLELARLKYEQVEGKGQNLEDQAKAGIKLAQTQVDLAKIQLEKAKISSPV 135

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +GT++         +      +  I+      Y++  +  K +  +K G T  V+     
Sbjct: 136 SGTVLTTPV-KPGEFVNPGTTVATII-DLGKIYVKYYIPEKYLNRIKLGDTVCVK----N 189

Query: 357 DIREKKFKAIIEKIDPIIS-----QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +  +      +  I P         +    Q++  Y V +++T      +  +++ G 
Sbjct: 190 ENLKMAPTGKVVYISPKGEFTPKPAETREDQSEISYLVKIELT-----KDFQDVQPGM 242



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 9/104 (8%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           + E +  E+K+  +G +    V+ G +I +G PL+  +D        L K  ++  R ++
Sbjct: 35  IAEADQYEVKAEIAGKVNNVFVKEGDEIKKGQPLVALDD-------SLLKNQLEAARANL 87

Query: 111 DTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHSTCSKV 152
           +  +   + +  K   LE   ++  +  Q    L K     +K+
Sbjct: 88  ELARLKYEQVEGKGQNLEDQAKAGIKLAQTQVDLAKIQLEKAKI 131


>gi|154245006|ref|YP_001415964.1| RND family efflux transporter MFP subunit [Xanthobacter
           autotrophicus Py2]
 gi|154159091|gb|ABS66307.1| efflux transporter, RND family, MFP subunit [Xanthobacter
           autotrophicus Py2]
          Length = 373

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 74/220 (33%), Gaps = 17/220 (7%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L     + + N  S +++ + + ++     +   N+   K     ++ +    + E    
Sbjct: 74  LESSGTVAKINFKSGDEVREGQVLLQLRDEQEVANLAALKAT-ADVSAIILNRDQEQLKI 132

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
                  ++ +       ++++   +   ++KT+ +P +G  +  +S     Y      +
Sbjct: 133 HAVSQATIDSDTANLKKALAQVAEQQAVVDKKTLKAPFSGR-LGIRSVDLGQYVSAGTAV 191

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + +   +   +I   +  + +  VK G T       Y     + F+  +  I P +    
Sbjct: 192 VTLQSLN-PIFIDFYLPQQALAEVKTGQTVKATVDTYP---GQAFEGTVTAISPKVDVTS 247

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            N+Q               F +++  L  G  A V     
Sbjct: 248 RNVQL-----------RAEFRNDDHRLTPGMFATVEVAVG 276



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 51/150 (34%), Gaps = 3/150 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFS-GIIKKFQVENGSQILQGTPLLTFEDIETT 93
           + L P + +V + G +  E       +  S G + K   ++G ++ +G  LL   D +  
Sbjct: 49  AGLTPWQSTVKAVGSVRAEAGADL--ALESSGTVAKINFKSGDEVREGQVLLQLRDEQEV 106

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +   K +       ++ ++  L         ++    + ++ L     +      K  
Sbjct: 107 ANLAALKATADVSAIILNRDQEQLKIHAVSQATIDSDTANLKKALAQVAEQQAVVDKKTL 166

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               S       + L +  S     + L++
Sbjct: 167 KAPFSGRLGIRSVDLGQYVSAGTAVVTLQS 196


>gi|332759793|gb|EGJ90096.1| macrolide-specific efflux protein macA [Shigella flexneri 4343-70]
 gi|332762934|gb|EGJ93184.1| macrolide-specific efflux protein macA [Shigella flexneri K-671]
 gi|333006970|gb|EGK26465.1| macrolide-specific efflux protein macA [Shigella flexneri K-218]
 gi|333020934|gb|EGK40192.1| macrolide-specific efflux protein macA [Shigella flexneri K-304]
          Length = 263

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 3   LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRN 62

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 63  QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 121

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 122 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 174

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 175 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 213


>gi|313650574|gb|EFS14977.1| RND family drug transporter [Shigella flexneri 2a str. 2457T]
 gi|333004449|gb|EGK23979.1| RND family drug transporter [Shigella flexneri VA-6]
          Length = 150

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 15/153 (9%)

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
           R   DE  + +I   +R+   + +PI G +    + +  ++ +    L+ +VP S+  ++
Sbjct: 2   RQQQDEQGRFSIC--SRQAAVVRAPIDGIVANRSAHT-GSWVEGGTSLVSLVPVSE-LWV 57

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII--------SQQDNNLQ 382
            A     QI  +K G  A +R      ++ + F   IE + P           +      
Sbjct: 58  DANYKENQIAGMKPGMKAEIRA---DILKGEVFHGHIESLSPATGASFSLIPIENATGNF 114

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           T+    V ++I      +    LR G    V  
Sbjct: 115 TKIVQRVPVRIAFDDAKELKQLLRPGLSVTVSV 147


>gi|294852684|ref|ZP_06793357.1| HlyD family secretion protein [Brucella sp. NVSL 07-0026]
 gi|294821273|gb|EFG38272.1| HlyD family secretion protein [Brucella sp. NVSL 07-0026]
          Length = 355

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 152


>gi|229521121|ref|ZP_04410542.1| hypothetical protein VIF_001646 [Vibrio cholerae TM 11079-80]
 gi|229342006|gb|EEO07007.1| hypothetical protein VIF_001646 [Vibrio cholerae TM 11079-80]
          Length = 368

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 21/206 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S   + + + +V   +   R N+   +  L      Y+     FA          ++ + 
Sbjct: 87  SGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKG-SISKESYDEAEA 145

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           ++    + +  L+ T  ++ I +P AG I     F    Y Q       IV     + +R
Sbjct: 146 SYYALSADIESLKATIARREIKAPFAGVIGIRNVF-LGQYLQPGT---DIVRLEDTSVMR 201

Query: 332 AK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
            +  V  + I  +       +    Y       FK  I  I+P +S Q   +Q Q     
Sbjct: 202 LRFTVPQRDISRISLDQEVDIFVDAYPQT---SFKGSISAIEPAVSVQSGLIQVQ----- 253

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
                     +++ +LR+G  A    
Sbjct: 254 ------ADIPNSDGKLRSGMFARANI 273



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 52/138 (37%), Gaps = 1/138 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +   E+G+Q+ +  PL+  +       +   +  +   +   +  K      +   
Sbjct: 78  GVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKGSISK 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  ++A  S      D      +   +      + V     + L +      + + LE+ 
Sbjct: 138 ESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLED- 196

Query: 185 SSLLRALLSSHQKDLTMM 202
           +S++R   +  Q+D++ +
Sbjct: 197 TSVMRLRFTVPQRDISRI 214


>gi|281357474|ref|ZP_06243962.1| Chromosome segregation ATPase-like protein [Victivallis vadensis
           ATCC BAA-548]
 gi|281316077|gb|EFB00103.1| Chromosome segregation ATPase-like protein [Victivallis vadensis
           ATCC BAA-548]
          Length = 604

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 78/205 (38%), Gaps = 15/205 (7%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +  +  +     +  + + R  +D  K  L     K D   +      E+L         
Sbjct: 153 DLNKLNENYAAARQRLSDTRDRLDEAKETLKEREAKLDAASREIMKAREELAAREAALSG 212

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           T  +     +S    +LK  LTR   I   +  LE   S  R  L++ +++L   ++  E
Sbjct: 213 TRGQ-----LSETKAALKEALTRTGEISQAKQQLEGDLSYTRGRLTAAERELAEARSQAE 267

Query: 208 K----NAVSQNDLNQQERIVYKSTLELR---ENIHEQKNMLRHINELYDEANLEFANYLK 260
           +     A  + + N+ +R + + +  L+     + + KN L    E+      E      
Sbjct: 268 RIRKLAAEREMERNEAKRQLAEMSAMLKNAVTELSQTKNELGKTREVAANTGKELIVTQG 327

Query: 261 EISR---DLEQNQRTFADEMSKLTI 282
           ++ R   +LEQ QR  ++   KL+ 
Sbjct: 328 KVERTSLELEQAQRQLSEAEKKLST 352


>gi|119469565|ref|ZP_01612469.1| hypothetical protein ATW7_06898 [Alteromonadales bacterium TW-7]
 gi|119447100|gb|EAW28370.1| hypothetical protein ATW7_06898 [Alteromonadales bacterium TW-7]
          Length = 417

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 5/168 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V++SG+I+   N   I SP  G +    V+ G  + +G  L      E T+ +  ++  +
Sbjct: 68  VAASGKIVAA-NAPHIYSPERGFVS-LHVKAGDTVTKGDELAVLHSPELTNELKQQQSVL 125

Query: 104 KNLRCHIDTE--KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           + L   +  +  +S  D L     +   + E    Q  D   K       +    +    
Sbjct: 126 QRLEGELKRQHLQSRRDTLTLTKTLDMASVELNAAQREDRRAKLSIKKHLISQIDLEKAI 185

Query: 162 RSL-KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             L + +LT   +     L  +  +  L+A  S  ++   ++  L  K
Sbjct: 186 DDLSRAQLTYKHAQQEVALAKDTLAFELQAAKSDVERQQLIVDELHRK 233



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 87/226 (38%), Gaps = 23/226 (10%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L  +L + +S+            L R  L S +  LT+ K L     ++  +LN  +R 
Sbjct: 113 ELTNELKQQQSVLQRLEG-----ELKRQHLQSRRDTLTLTKTL----DMASVELNAAQRE 163

Query: 223 VYKSTLELRENIHEQKNMLRHINEL------YDEANLEFANYLKEISRDLEQNQRTFADE 276
             ++ L +++++  Q ++ + I++L      Y  A  E A     ++ +L+  +     +
Sbjct: 164 DRRAKLSIKKHLISQIDLEKAIDDLSRAQLTYKHAQQEVALAKDTLAFELQAAKSDVERQ 223

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
              +  L +   + +I + + G +        +   Q  QPLM +V        + +V  
Sbjct: 224 QLIVDELHRKVNELSIRATVTGIVGNLLVQQKAAVTQS-QPLMTLV-DLSHFEAQLQVPE 281

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                +  G    ++F        +    ++  I P ++ ++   +
Sbjct: 282 SYANELGLGMDVELKF------GNETIMGVLSAISPEVNNREVTTR 321


>gi|326668417|ref|XP_683046.5| PREDICTED: myosin-10 [Danio rerio]
          Length = 1980

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 79/219 (36%), Gaps = 12/219 (5%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE----KSALDFLNNKYDVLEKAFE 132
            ++     ++  +  E     +  +  ++  +  +D E    +  +  L  + D L+    
Sbjct: 1034 KVKNKQEMMMVDLEERLKKEEKTRQELEKAKRKLDAETTDLQDQIAELQAQIDELKIQLA 1093

Query: 133  SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             +EE+L   L +     ++  N       R L+ +L  ++    +     NK+  L+  L
Sbjct: 1094 KKEEELQAVLARGDEEVAQKNNALKQ--LRELQAQLAELQEDLESEKAARNKAEKLKRDL 1151

Query: 193  SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            S   ++L  +K   E    +     +      +   EL++ I ++            E  
Sbjct: 1152 S---EELEALKTELEDTLDTTAAQQELRSKREQEVAELKKAIDDETRNH---ESQIQEMR 1205

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                  L+EIS  LEQ +R   +       LE   ++ T
Sbjct: 1206 QRHGTALEEISEQLEQAKRVKGNLEKNKQTLESDNKELT 1244



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 88/268 (32%), Gaps = 49/268 (18%)

Query: 67   IKKFQVE-NGSQIL---QGTPLLTFEDIETTDLIDLKK--VSIKNLRCHIDTEKSALDFL 120
            +K+ QV+     +    +   LL  ++I    L    +     + +R  +  +K  L+ +
Sbjct: 871  VKERQVKVENELVEMERKHQQLLEEKNILAEQLQAETELFAEAEEMRARLVAKKQELEEI 930

Query: 121  NNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--------------------FNYGISSV 160
             +  +   +  E R + L +   K  S    +                        I  +
Sbjct: 931  LHDLESRVEEEEERNQSLQNEKKKMQSHIQDLEEQLDEEEAARQKLQLEKVTAEAKIKKM 990

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD--------------LTMMKNLF 206
               + +   +       +  LE++   + + L+  ++               +  ++   
Sbjct: 991  EEDILLLEDQNSKFLKEKKLLEDRVGEMTSQLAEEEEKAKNLGKVKNKQEMMMVDLEERL 1050

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK------ 260
            +K   ++ +L + +R +   T +L++ I E   +   I+EL  +   +            
Sbjct: 1051 KKEEKTRQELEKAKRKLDAETTDLQDQIAE---LQAQIDELKIQLAKKEEELQAVLARGD 1107

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTRE 288
            E         +   +  ++L  L++  E
Sbjct: 1108 EEVAQKNNALKQLRELQAQLAELQEDLE 1135



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 79/220 (35%), Gaps = 23/220 (10%)

Query: 88   EDIETTDLIDLK-KVSIKNLRCHIDTEKSALDFLNNKYDVL----------EKAFESREE 136
            ++++ T+   L+ +V+++ ++   D +  A D  N +              E   E ++ 
Sbjct: 1560 DELQATEDAKLRLEVNMQAMKAQFDRDLQARDEQNEEKKRALVKQVREMEAELEDERKQR 1619

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN----RLDLENKSSLLRALL 192
             L     K      K     I +  ++    + ++R +       + +LE   +    + 
Sbjct: 1620 ALAVAAKKKLEMDLKDVEAQIEAANKARDEAIKQLRKLQAQMKDYQRELEEARTSRDEIF 1679

Query: 193  SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            +  +++   +K+L  +    Q DL   ER    +  E  E   E  N       L DE  
Sbjct: 1680 TQSKENEKKLKSLEAEILQLQEDLASSERARRHAEQERDELADEISNSASGKAALLDE-- 1737

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                   + +   + Q +    +E S + +L     + T+
Sbjct: 1738 ------KRRLEARIAQLEEELEEEQSNMELLNDRFRKTTM 1771



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 68/221 (30%), Gaps = 26/221 (11%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                D      K +      E+   +    + D    +     ++ L+   +     +K 
Sbjct: 1457 QKKFDQMLAEEKTISARYAEERDRAEAEAREKDTKALSMARALDEALEA-KEEFERLNKQ 1515

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM---------- 202
                +  +  S       +  +  ++  LE +   +R  L   + +L             
Sbjct: 1516 LRAEMEDLISSKDDVGKNVHELEKSKRTLEQQVEEMRTQLEELEDELQATEDAKLRLEVN 1575

Query: 203  ---------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD---- 249
                     ++L  ++  ++       + V +   EL +   ++   +    +L      
Sbjct: 1576 MQAMKAQFDRDLQARDEQNEEKKRALVKQVREMEAELEDERKQRALAVAAKKKLEMDLKD 1635

Query: 250  -EANLEFANYLK-EISRDLEQNQRTFADEMSKLTILEKTRE 288
             EA +E AN  + E  + L + Q    D   +L     +R+
Sbjct: 1636 VEAQIEAANKARDEAIKQLRKLQAQMKDYQRELEEARTSRD 1676


>gi|310815031|ref|YP_003962995.1| secretion protein HlyD [Ketogulonicigenium vulgare Y25]
 gi|308753766|gb|ADO41695.1| secretion protein HlyD [Ketogulonicigenium vulgare Y25]
          Length = 367

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 36/98 (36%), Gaps = 3/98 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G+I +  VE G  +  G  L   +  + T+ + + + S+        T  +A     + 
Sbjct: 66  GGLIIEINVEVGDIVSAGDVLARLDPTQQTEAVRIAEASLTAAEASRTTFAAAFARQQSL 125

Query: 124 YD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +       +++S  + ++       +  +++     +
Sbjct: 126 LENGNTTRASYDSAYQSMVSATSARDNAQAQLAKARQA 163


>gi|308051349|ref|YP_003914915.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
 gi|307633539|gb|ADN77841.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
          Length = 357

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 67/198 (33%), Gaps = 23/198 (11%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L Q +  V ++ L+      E   +    N+   E          E S +L+      A 
Sbjct: 97  LLQLDDGVEQANLQSYRAQAELAKVKFERNQTMFERRNISETEFDESSANLKVALAAVAQ 156

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
                   E T ++K + +P +G ++  +      Y Q  + L+ +       Y    V 
Sbjct: 157 -------TEATIDKKAVTAPFSG-VLGIRKVDLGQYVQAGESLVTLQ-DVSSLYADFSVP 207

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
            + +  +  G T   R   Y+D+    F+  +  +D  + +   N+              
Sbjct: 208 EQYLPSLYVGQTVLFRTSAYSDV---DFQGKVIALDAKVDENTRNIAI-----------R 253

Query: 396 LAFSDNNIELRNGFPAEV 413
               +++  L  G  A++
Sbjct: 254 AEVPNSDGRLTPGMYADI 271



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 46/124 (37%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG+++     +G ++ +G  LL  +D      +   +   +  +   +  ++  +  N  
Sbjct: 77  SGLVEGLYFRSGQKVNKGDLLLQLDDGVEQANLQSYRAQAELAKVKFERNQTMFERRNIS 136

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +++  + +  L        +   K      S V    K+ L +      + + L++
Sbjct: 137 ETEFDESSANLKVALAAVAQTEATIDKKAVTAPFSGVLGIRKVDLGQYVQAGESLVTLQD 196

Query: 184 KSSL 187
            SSL
Sbjct: 197 VSSL 200


>gi|258627486|ref|ZP_05722267.1| periplasmic linker protein, putative [Vibrio mimicus VM603]
 gi|258580292|gb|EEW05260.1| periplasmic linker protein, putative [Vibrio mimicus VM603]
          Length = 404

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 56/167 (33%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L T +  +    ++  ++ +KN        K+  +     
Sbjct: 117 SGRLTDIAVKEGDQVKKGQRLATLDSRDAKTALEAAELELKNTEQEYRRAKAIFEKTQAI 176

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ D   K   T       GI S          +   + +   
Sbjct: 177 SKAELDKVTNRYDLAKNRVEDAKRKLEYTQITAPFDGIISEKVVENFAQVQANQVIMTLQ 236

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +   ++          +   + + E +A+     + Q R     
Sbjct: 237 DLSDLEVVIEIPHRVMLSGVRNTRAIAELSAIPDQQFDLQLRTYSTQ 283



 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 64/205 (31%), Gaps = 25/205 (12%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + +R+    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 130 QVKKGQRLATLDSRDAKTALEAAELELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYD 189

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I +P  G I   +   +    Q +Q +M +     L+ +   +
Sbjct: 190 LAKNRVEDAKRKLEYTQITAPFDGIISE-KVVENFAQVQANQVIMTL---QDLSDLEVVI 245

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-----YEV 389
                          V          +    +    D     Q     TQ       Y V
Sbjct: 246 EI----------PHRVMLS--GVRNTRAIAELSAIPDQQFDLQLRTYSTQPSPDSQTYSV 293

Query: 390 ILKITDLAFSDNNIELRNGFPAEVL 414
           +L   DL        +  G  A+VL
Sbjct: 294 VLGFEDL----KGFRVMPGMSAKVL 314


>gi|256422355|ref|YP_003123008.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
 gi|256037263|gb|ACU60807.1| efflux transporter, RND family, MFP subunit [Chitinophaga pinensis
           DSM 2588]
          Length = 371

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 62/168 (36%), Gaps = 4/168 (2%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             VEI++  +G + K  V+ G  + QG  L +  D E    +   K ++ +       E 
Sbjct: 59  RNVEIRARVNGFLNKIYVDEGQHVQQGQLLFSLNDEEYRSELAKAKAALSSA----IAEA 114

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
                  ++  +L +     + +L     +  +  +++     S    + ++  T +R+ 
Sbjct: 115 KGAQLEVDRVQLLVEKKVIAKSELEVAKARLAAGNARIDEARSSEANAATRLSYTVIRAP 174

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +   +D     S            ++ +K ++    VS+ +  Q  R 
Sbjct: 175 FDGYIDRIPSKSGSLIGEGELLTSVSDIKEVYAYFNVSETEYLQHSRA 222


>gi|300774947|ref|ZP_07084810.1| HlyD family secretion protein [Chryseobacterium gleum ATCC 35910]
 gi|300506762|gb|EFK37897.1| HlyD family secretion protein [Chryseobacterium gleum ATCC 35910]
          Length = 409

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 2/121 (1%)

Query: 39  PIEISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            +  ++ ++G + +   N   I S + GIIK   ++ GS + +G  + T  + E    + 
Sbjct: 70  ELTSTIKANGLLSVPNSNKATITSLYGGIIKTINIQVGSIVKKGQVIATIANPEYI-QLQ 128

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
              ++  +   + + E      L +     +K  +S + +L     K  S   ++   GI
Sbjct: 129 EDYLTTNSRITYAEQEYRRQRELFDNDAGAKKNLQSADAELKTLRTKRASLLKQLQMMGI 188

Query: 158 S 158
           S
Sbjct: 189 S 189



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 58/159 (36%), Gaps = 12/159 (7%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           ++ +K  V     N +   + +  L     I   +   R   EL+D  +      L+   
Sbjct: 108 SIVKKGQVIATIANPEYIQLQEDYLTTNSRITYAEQEYRRQRELFD-NDAGAKKNLQSAD 166

Query: 264 RDLEQNQRTFADEMSKLTILE---------KTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            +L+  +   A  + +L ++            +    I +PI+GTI    +    +Y   
Sbjct: 167 AELKTLRTKRASLLKQLQMMGISPGKVSNGNMKSGLVITAPISGTISSITA-QIGSYVDI 225

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           S P+  ++  +   ++  +V  K +  ++ G     +  
Sbjct: 226 SSPVATVI-DNGSIHLDLQVFEKDLPKMRVGQIVHFKLT 263


>gi|212692995|ref|ZP_03301123.1| hypothetical protein BACDOR_02502 [Bacteroides dorei DSM 17855]
 gi|212664464|gb|EEB25036.1| hypothetical protein BACDOR_02502 [Bacteroides dorei DSM 17855]
          Length = 416

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 25/202 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+   RL L+     ++      ++     K L E
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQERLSLKQDRIGMQKEFLIKKRRYGQYKRLME 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  +++ D  Q             E     K  L  ++E   + +L     +  +  ++ 
Sbjct: 168 EQLIAREDYLQA-----------TEEYEAAKEQLSVLDERIRQDSLFRLTQISSLDENIM 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+ A    +L       E   + +PI G +   ++          + + +I+     
Sbjct: 217 NMKRSLALVRERL-------ENLKVKAPIDGQVGNLEA-QIGQSISAGEHIGQIITAD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTAT 349
             ++A +    ++ V +   A 
Sbjct: 267 LKVQALIDEHYVERVVQELPAD 288



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 81/227 (35%), Gaps = 22/227 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G++L    ++ + +   G +++   E G+ + +G  +L   +       +++   +
Sbjct: 62  IRVIGQVLPS-RMIYLDAIEGGRVEERLHEEGAMVKKGDAILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY- 155
             ++  ++N R  ++ E+ +L              + R  Q    + +            
Sbjct: 121 AYQENELRNTRISMEQERLSLKQDRIGMQKEFLIKKRRYGQYKRLMEEQLIAREDYLQAT 180

Query: 156 -GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +    L +   R+R   L RL    + S L   + + ++ L +++   E       
Sbjct: 181 EEYEAAKEQLSVLDERIRQDSLFRL---TQISSLDENIMNMKRSLALVRERLEN------ 231

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              + +  +      L   I +  +   HI ++   A+L+    + E
Sbjct: 232 --LKVKAPIDGQVGNLEAQIGQSISAGEHIGQIIT-ADLKVQALIDE 275


>gi|168765083|ref|ZP_02790090.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4501]
 gi|189365046|gb|EDU83462.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4501]
          Length = 371

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++   L D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|113673505|ref|NP_001038227.1| cingulin [Danio rerio]
 gi|123888142|sp|Q1L8T5|CING_DANRE RecName: Full=Cingulin
 gi|94734554|emb|CAK05370.1| novel protein (im:7137721 ) [Danio rerio]
          Length = 1161

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 72/209 (34%), Gaps = 10/209 (4%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS-- 150
             + I   +  +  LR  +  E+SA   L      LE+  +  + ++ D   +   +    
Sbjct: 951  NERITRCREQVDQLRSELMQERSARHDLEMDKSALERQIKELKSRIADMGTQSRPSAGVT 1010

Query: 151  ------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MK 203
                  +     + S  R         R +     D+       R   +  +  L++ +K
Sbjct: 1011 MLENKVQELEDRLRSEEREKNTIQAAQRRLDRKLKDVTATLDQERNQHAEQRDQLSLRVK 1070

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L  +   S+ ++ + E +  K   EL E    Q  +   +N + +E      +    + 
Sbjct: 1071 ALKRQLDESEGEVERLEGVRRKVLRELEEQRELQAALQAKVNAMDNELRKIQQSRRSTLG 1130

Query: 264  RDL-EQNQRTFADEMSKLTILEKTREQKT 291
              L    +  ++D  S  +IL  +  Q T
Sbjct: 1131 STLSSDEEDNYSDTKSITSILTDSPLQTT 1159



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 83/235 (35%), Gaps = 22/235 (9%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY----DVLEKAF 131
             + +    L  +  ET    +  K + +         K+ +D L N+     + L KA 
Sbjct: 643 DSLKKAQSELEKQKAETLKKQEELKSATRASEKRETELKAEIDRLINQLKKEKEELSKAI 702

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYR-SLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           E  ++ L+    K   +  ++         R +   +L        +   LE ++  L+ 
Sbjct: 703 EKTQQPLVSDQTKDPESNLELQEANARLRERIARMTRLHSSVPDSSSSDALEEENRSLKT 762

Query: 191 LLSSHQKDLTMM--------------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            L   ++  + +              +   E     ++DL +Q+R++ +S  ++ +   E
Sbjct: 763 QLEESRRAASRLGVEKEELNRRLEEREREREALRRGKSDLEEQKRLLDRSLDKINK---E 819

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++M+    +       +   +     R+L+  QR   D + +L   +   +   
Sbjct: 820 MESMMGDSRQSVQVLQSQLEEFRDRSRRELQDAQRLSKDRLVELQRAQALLKTTQ 874



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 80/236 (33%), Gaps = 29/236 (12%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            PL++ +  +    ++L++ +   LR  I         + +         E+R  +    
Sbjct: 707 QPLVSDQTKDPESNLELQEAN-ARLRERIARMTRLHSSVPDSSSSDALEEENRSLKTQLE 765

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT- 200
             +  ++           + R L+ +     ++   + DLE +  LL   L    K++  
Sbjct: 766 ESRRAASR---LGVEKEELNRRLEEREREREALRRGKSDLEEQKRLLDRSLDKINKEMES 822

Query: 201 -----------MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                      +   L E    S+ +L   +R+     +EL+      K     ++ +  
Sbjct: 823 MMGDSRQSVQVLQSQLEEFRDRSRRELQDAQRLSKDRLVELQRAQALLKTTQEEVSRVKK 882

Query: 250 EA-------------NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           E                  ++ LK +  +L+ ++ +  D   ++ +LE   +   I
Sbjct: 883 ELLSCTEERDSTQLDKELLSSRLKNMETELQTDRSSQTDRSREIRLLEDKVKTLEI 938



 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 46/115 (40%), Gaps = 5/115 (4%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           T +   +     L+ +    R  L  +Q  +  ++ +  + A  ++ L QQE  + +   
Sbjct: 417 TELEQAFGRNTQLQQQLDKSRRELQENQDQMVELR-MDREGA--ESRLRQQEDQLAQLQE 473

Query: 229 ELRENIHEQ-KNMLRHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLT 281
           ELR  +    ++    ++ L  +A L  +  L++   D L Q +R        L 
Sbjct: 474 ELRRTLENSPQSDSMQLDLLTVQAELSESQLLRQKLEDTLRQRERELTALKGALK 528


>gi|86750760|ref|YP_487256.1| secretion protein HlyD [Rhodopseudomonas palustris HaA2]
 gi|86573788|gb|ABD08345.1| Secretion protein HlyD [Rhodopseudomonas palustris HaA2]
          Length = 397

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 54/171 (31%), Gaps = 16/171 (9%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + EL  +   + A         ++Q Q +F    + +   E    QK + +P  G
Sbjct: 137 RAQVKVAELSLDRAKQLAARQFGPQATVDQAQASFDQANAGIARTEAVISQKLVRAPFDG 196

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            ++  +      Y      ++ +       Y    VT K    +K G    V    Y   
Sbjct: 197 -VLGVRRVEVGQYLTAGTQIVTLT-DLSRVYTNFTVTEKDSGTLKVGQAVRVTVDAYPGR 254

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
               F+  I  I+P IS +  N++ Q               +    L+ G 
Sbjct: 255 ---VFEGKITTIEPQISAETRNIRVQ-----------GTLDNPEHILKPGM 291



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 36/119 (30%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I       G+++  G  LL   D      +   +  +K     +D  K          
Sbjct: 102 GRITDILFTPGAEVKAGAKLLQLYDAPEQADLANYRAQVKVAELSLDRAKQLAARQFGPQ 161

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +++A  S ++              K+       V    ++++ +  +     + L +
Sbjct: 162 ATVDQAQASFDQANAGIARTEAVISQKLVRAPFDGVLGVRRVEVGQYLTAGTQIVTLTD 220


>gi|333005877|gb|EGK25393.1| hypothetical protein SFK272_2338 [Shigella flexneri K-272]
 gi|333018880|gb|EGK38173.1| hypothetical protein SFK227_1953 [Shigella flexneri K-227]
          Length = 256

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 61/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE--------F 255
           N+ +   V+  +L            EL     +       + +  +EAN          F
Sbjct: 30  NIKDNQLVNAGELLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIF 88

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 89  AEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 147

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 148 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 198

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 199 RAIYDQS 205



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 38/122 (31%), Gaps = 11/122 (9%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKV 101
            G+I  E   V I    SG I +  +++   +  G  LLT +       E      L K 
Sbjct: 8   DGKIRAEQ--VSITPQVSGRIVELNIKDNQLVNAGELLLTIDKTPFQIAELNAQAQLAKA 65

Query: 102 SIKNLRCHIDTEKSALDFLNN----KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                + + +  +      N     + D      ++ +  +         T  ++    I
Sbjct: 66  QSDLAKANNEANRRRHLSQNFIFAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEI 125

Query: 158 SS 159
            +
Sbjct: 126 RA 127


>gi|269959492|ref|ZP_06173875.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835929|gb|EEZ90005.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 368

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 57/150 (38%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  +    + +  L+ T +++ I +P AG +V  ++     Y Q       IV     
Sbjct: 142 EAEANYFSLKADIESLKATIDRREIKAPFAG-VVGIRNVYLGQYLQAGT---DIVRLEDT 197

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           T +R +  V    I  +K      +    Y D   K FK  I  I+P ++ Q   +Q Q 
Sbjct: 198 TVMRLRFTVPQTDISRIKLDQEVDIFVDAYPD---KPFKGSISAIEPAVNVQSGLIQVQ- 253

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +++ +LR+G  A    
Sbjct: 254 ----------ADIPNSDGKLRSGMFARANI 273



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 47/135 (34%), Gaps = 5/135 (3%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G I     V  + +  SG+I K   ++G+Q+ +G PL+  +       +   +  
Sbjct: 57  VIEAIGFIEPNQGV-TVANETSGVIDKISFDSGTQVEEGQPLVLLDSEVEIANLKSSQAK 115

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   +      +     L  K  + ++A++  E           S  + +    I + + 
Sbjct: 116 LPAAQAKYKRYQG----LFKKGSISKEAYDEAEANYFSLKADIESLKATIDRREIKAPFA 171

Query: 163 SLKMKLTRMRSIYLN 177
            +          YL 
Sbjct: 172 GVVGIRNVYLGQYLQ 186


>gi|262371239|ref|ZP_06064559.1| membrane fusion protein [Acinetobacter johnsonii SH046]
 gi|262313846|gb|EEY94893.1| membrane fusion protein [Acinetobacter johnsonii SH046]
          Length = 409

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 92/276 (33%), Gaps = 9/276 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTF---EDI 90
           +    +E   +  G+++   +     SP  SG +++  V  G  + +G  L      E I
Sbjct: 83  ASTGLVEKLTTLPGKLVVNTDQQAHISPNFSGYVEQINVALGQSVQKGQTLAVLTVPELI 142

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +    + + +V++   R     E+   S        Y   E A+   +  +     + ++
Sbjct: 143 DQQANLRMAQVNLDLARKDYQREQQLWSQGVSAKQDYQRAENAYRQAQITVQSSQARLNA 202

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             +   N G   +   +   +++   +    + L N+  ++  L     +     +   +
Sbjct: 203 LGASGNNNGRFLIKAPISGVISQKDIVVGENVQLANQLFVIEQLKDLWLEFNLPNQFSGQ 262

Query: 208 KNAVSQND--LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             A  + D  +N  ++    +   L      Q   L    +L  +A    +N L  +   
Sbjct: 263 LQAGQKIDFKVNDSDQSYKATVQSLTSQADVQTGRLVVRAKLDAQATELRSNVLVRVLIP 322

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
               +     + S L  +E       + S   G + 
Sbjct: 323 EATAKSALRIQKSALQSIEGEDSIFIVDSEQKGQVH 358


>gi|256160094|ref|ZP_05457788.1| Gram-negative bacterial RTX secretion protein D [Brucella ceti
           M490/95/1]
 gi|256255300|ref|ZP_05460836.1| Gram-negative bacterial RTX secretion protein D [Brucella ceti
           B1/94]
 gi|260169032|ref|ZP_05755843.1| Gram-negative bacterial RTX secretion protein D [Brucella sp.
           F5/99]
 gi|261222497|ref|ZP_05936778.1| secretion protein HlyD family protein [Brucella ceti B1/94]
 gi|261758531|ref|ZP_06002240.1| gram-negative bacterial RTX secretion protein D [Brucella sp.
           F5/99]
 gi|260921081|gb|EEX87734.1| secretion protein HlyD family protein [Brucella ceti B1/94]
 gi|261738515|gb|EEY26511.1| gram-negative bacterial RTX secretion protein D [Brucella sp.
           F5/99]
          Length = 355

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSFVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 152


>gi|222873592|gb|EEF10723.1| predicted protein [Populus trichocarpa]
          Length = 282

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 56/141 (39%), Gaps = 6/141 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               IE +V++ G +     V ++ +  SG + + +VE G+Q+ +G  L+  +       
Sbjct: 42  ARTDIESTVTAIGTLQPRRYV-DVGAQVSGQVTRLRVEPGAQVEKGALLVEIDPSVQRAT 100

Query: 96  IDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +D  + S+  LR  +      +   +    +   L +   +REE L        +  +++
Sbjct: 101 VDAGRASLAGLRAQLAEQQALRKLAEQQLTRQRQLARDGATREEDLQTAEANLAAAGARM 160

Query: 153 --FNYGISSVYRSLKMKLTRM 171
                 I     +LK    R+
Sbjct: 161 EHLKAQIDQTQATLKADEARL 181


>gi|218891589|ref|YP_002440456.1| hypothetical protein PLES_28651 [Pseudomonas aeruginosa LESB58]
 gi|218771815|emb|CAW27592.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
          Length = 334

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 91/263 (34%), Gaps = 34/263 (12%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI--HEQKNML 241
           +   L   +   + +L +++     N V++  L +    +  S  +LR+     ++++ L
Sbjct: 69  EKGELLLSIDPARYELAVLRAERAVN-VARAALGESRAAIEASQAQLRQRRSEAQRRSAL 127

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTF-------ADEMSKLTILEKTREQKTILS 294
           +  + L  E N +    +     +L +NQ +            + L       E+  + +
Sbjct: 128 QKRSMLSVEENEKAQTDVSLAQAELLRNQASLGLAQANVELAEAALQQARLDLERTQVRA 187

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P++G +   Q+    +YA    PL+ +V      Y+       ++  +  G  A V    
Sbjct: 188 PVSGYVTNLQTR-EGDYAHAGVPLLALV-DRDSFYVSGYFEETKLPGIHVGSRARVELMS 245

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQT------QEYYE---------VILKITDLAFS 399
                 ++F   ++ I   I+ ++N   +         Y          V + I      
Sbjct: 246 -----GERFDGRVQSIAHAITDRENAEGSRLLANINPSYTWVKLAQRIPVRIAIDPAYRQ 300

Query: 400 DNNIELRNGFPAEVLFTAKNTTL 422
            N   LR G  A +       T 
Sbjct: 301 RN--TLRAGVTATIRVLPAEDTA 321



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 50/145 (34%), Gaps = 2/145 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV + +  SG+I +  + +   + +G  LL+ +       +   + ++   R  + 
Sbjct: 42  VRADVVTLSADVSGLITRLPLSDNQPVEKGELLLSIDPARYELAVLRAERAVNVARAALG 101

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++A++   ++  + ++  E++    L          ++     +S     L      +
Sbjct: 102 ESRAAIE--ASQAQLRQRRSEAQRRSALQKRSMLSVEENEKAQTDVSLAQAELLRNQASL 159

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQ 196
                N    E      R  L   Q
Sbjct: 160 GLAQANVELAEAALQQARLDLERTQ 184


>gi|153803718|ref|ZP_01958304.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|229512507|ref|ZP_04401979.1| hypothetical protein VCB_000147 [Vibrio cholerae TMA 21]
 gi|254292193|ref|ZP_04962962.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|297581600|ref|ZP_06943522.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|124120745|gb|EAY39488.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|150421895|gb|EDN13873.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|229350506|gb|EEO15454.1| hypothetical protein VCB_000147 [Vibrio cholerae TMA 21]
 gi|297534007|gb|EFH72846.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 368

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 21/206 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S   + + + +V   +   R N+   +  L      Y+     FA          ++ + 
Sbjct: 87  SGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKG-SISKESYDEAEA 145

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           ++    + +  L+ T  ++ I +P AG I     F    Y Q       IV     + +R
Sbjct: 146 SYYALSADIESLKATIARREIKAPFAGVIGIRNVF-LGQYLQPGT---DIVRLEDTSVMR 201

Query: 332 AK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
            +  V  + I  +       +    Y       FK  I  I+P +S Q   +Q Q     
Sbjct: 202 LRFTVPQRDISRISLDQEVDIFVDAYPQT---SFKGSISAIEPAVSVQSGLIQVQ----- 253

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
                     +++ +LR+G  A    
Sbjct: 254 ------ADIPNSDGKLRSGMFARANI 273



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 52/138 (37%), Gaps = 1/138 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +   E+G+Q+ +  PL+  +       +   +  +   +   +  K      +   
Sbjct: 78  GVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKGSISK 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  ++A  S      D      +   +      + V     + L +      + + LE+ 
Sbjct: 138 ESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLED- 196

Query: 185 SSLLRALLSSHQKDLTMM 202
           +S++R   +  Q+D++ +
Sbjct: 197 TSVMRLRFTVPQRDISRI 214


>gi|86153479|ref|ZP_01071683.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85843205|gb|EAQ60416.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 390

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  ++ + G++  +D V ++ +  SG I K  V+ G+ + QG  +   +  +  + +D+ 
Sbjct: 42  ISQTIEAVGKVYAKDQV-DVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDIT 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +++ + +++++K AL+  + +Y   +K + ++   L +   + ++  +      ++ 
Sbjct: 101 KAQLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYT--LKANVAE 158

Query: 160 VYRSLKMKLTRMRSIY 175
           +   +      +++  
Sbjct: 159 LNAQVVQLEITLKNAQ 174



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 6/167 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q +  +      K  LE+    ++++  L        E      N    +  ++ +   
Sbjct: 102 AQLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELNA 161

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHSKLTY 329
                   L   +K     TI +P+ G ++             +Q    IV   +     
Sbjct: 162 QVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVD-EGQTVNANQNTPTIVRIANLDEME 220

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           +R ++    +  +K G    + F    D  +K + A I  IDP  ++
Sbjct: 221 VRMEIAEADVSKIKVG--TELDFSLLND-PQKTYHAKIASIDPADTE 264


>gi|331217762|ref|XP_003321559.1| hypothetical protein PGTG_03096 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309300549|gb|EFP77140.1| hypothetical protein PGTG_03096 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1326

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 81/247 (32%), Gaps = 26/247 (10%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                     P  GI  +  V+              E  +    +   +     LR  ++
Sbjct: 460 PSSGRK----PTGGITNQTMVKE----------FEREIKDLERQLRELENENVELRSQVN 505

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            +   L   N++ D L+    + + +++D   +      +      +            +
Sbjct: 506 AQVKMLSTKNSEKDKLQDQVSNLKSKVMDLQDELEQDAREFEKIQQAGNISLHDQAADEV 565

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI-------VY 224
           R       D    +S L  L    ++   +   L +++A    ++ +  R        V 
Sbjct: 566 REELNMYRD--KSASALLNLEKRQKEIDELNAELDDRDATFNEEVQKITRQHSRELDAVK 623

Query: 225 KSTLELRENIHEQKNMLRHINELYDEA---NLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               EL++ IHE+++ +  +++   E      E    L+E    L++ ++ +   +  L 
Sbjct: 624 AQRDELQQAIHEREDQIAELSDRLREVINLQAETDKSLRETRSKLKEKEKDYNSILQDLE 683

Query: 282 ILEKTRE 288
           + +   +
Sbjct: 684 VAQTDLK 690



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 70/207 (33%), Gaps = 9/207 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL------LDFLGK 144
           ET   +  K+    ++   ++  ++ L  +      L      +++Q+      LD L +
Sbjct: 663 ETRSKLKEKEKDYNSILQDLEVAQTDLKEIGAGNRELAAEVHEKDQQITELGAELDELEQ 722

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             S  S V    +  + + L    + +  + +      ++   L+      Q   + ++ 
Sbjct: 723 RESNRSTVNEQVVVKLKQKLNGTKSELNELSVRHESCLSELKFLKDKHEELQSRHSEIEE 782

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             +K +  +  L   ER +     ELR    +         +   E    F   L    +
Sbjct: 783 RRKKESDLKRRL---ERELDDLERELRGTREKMDLQAIAFKKEKRELQSSFQLALDSKQK 839

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKT 291
            L Q +    +   KL + E+  E+  
Sbjct: 840 ALAQAESDLDNLQGKLEVREEDIEKLE 866



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 67/213 (31%), Gaps = 14/213 (6%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDF----LNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
             I+ ++    +L+  ++ E   L+        K D+   AF+  + +L         + 
Sbjct: 778 SEIEERRKKESDLKRRLERELDDLERELRGTREKMDLQAIAFKKEKRELQSSFQLALDSK 837

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            K      S +         R   I      L+   S       S   D   ++   E+ 
Sbjct: 838 QKALAQAESDLDNLQGKLEVREEDIEKLETMLKRLESESNQFNQSQSHDKFSLELEIERI 897

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE----------ANLEFANYL 259
                   Q+ +      + L++ I + +  + ++    DE          A        
Sbjct: 898 QRDLLHSTQETQTYKDQNVSLQKQISKFQAAIANLKSEKDELSDKLLGVQRARDSLNEKY 957

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +E +++L + Q   +   ++L  LE       +
Sbjct: 958 EEQTKNLRETQNNLSVNKNRLQSLEDELTSDHL 990



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 73/217 (33%), Gaps = 28/217 (12%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE---------EQLLDF 141
           +  D +  K  SI+NL   +   K  L+ +++K    + A              + + ++
Sbjct: 325 KARDEVATKDKSIQNLESELQRLKDHLERVSSKDSPSKIASSHARNHTRQSISNQSVDNW 384

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD--- 198
             + H T  K     ++   +  +  L   + +     + +N     +  L         
Sbjct: 385 SNQEHLTEIKNLKNELAEERQQKEELLGDNQDLRYQLTETKNALQDTQDQLEERDNRSHH 444

Query: 199 LTMMKNLFEK--------------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           ++  ++ F++                 +Q  + + ER +     +LRE  +E   +   +
Sbjct: 445 ISRAQSRFQEDPNDYPSSGRKPTGGITNQTMVKEFEREIKDLERQLRELENENVELRSQV 504

Query: 245 NELYD--EANLEFANYLKEISRDLEQNQRTFADEMSK 279
           N             + L++   +L+       DE+ +
Sbjct: 505 NAQVKMLSTKNSEKDKLQDQVSNLKSKVMDLQDELEQ 541


>gi|283787773|ref|YP_003367638.1| HlyD-family secretion protein [Citrobacter rodentium ICC168]
 gi|282951227|emb|CBG90921.1| HlyD-family secretion protein [Citrobacter rodentium ICC168]
          Length = 378

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 95/294 (32%), Gaps = 14/294 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +N   I +G  L   + +     +D  +  +     +I   ++ L 
Sbjct: 66  VTPQVTGVVSEVTSKNNQLIEKGEVLFKIDPVRYQARVDRLQADLVTATHNIKVLQAQLA 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                   +      R+    D+      + ++V  +  S +  + +  L +   +  + 
Sbjct: 126 EAQANTTRVSAE---RDRLYKDYQRYLKGSRARVNPFSESDIDNARQNYLAQDALVKGSV 182

Query: 179 LDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            +     S L ++++  Q  +  ++  L E     +  + +     Y + + +R   +  
Sbjct: 183 AEQTQIQSQLDSMVNGEQSQIVSLRAQLAEARYNLEQTVVRAPSRGYVTQVLIRPGTYAA 242

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
              LR +     E   +     ++ S    +         + L       +   IL    
Sbjct: 243 ALPLRPVMVFIPEQKRQIVAQFRQNSLLRLERGDDAEVVFNALPGQVFHGKLAGIL---- 298

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK-QIQHVKKGYTATV 350
             +V   S+ +    Q     + +VP +        + P   +  +  G  A V
Sbjct: 299 -PVVPGGSYQAQGVLQS----LTVVPGTDGVLALIDLEPNADVDALPDGIYAQV 347


>gi|217970329|ref|YP_002355563.1| efflux transporter RND family, MFP subunit [Thauera sp. MZ1T]
 gi|217507656|gb|ACK54667.1| efflux transporter, RND family, MFP subunit [Thauera sp. MZ1T]
          Length = 384

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/176 (11%), Positives = 54/176 (30%), Gaps = 14/176 (7%)

Query: 215 DLNQQERIVYKSTLELRENIHEQK---------NMLRHINELYDEANLEFANYLKEISRD 265
            +  QE  + ++   +RE    Q          + L  +    +E  L     L+     
Sbjct: 103 RIRAQEAALERAQAAMREAEARQGFARTQARRYDKLGSLQAASEELALTRRQELEVAEAG 162

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L   +       ++   L+       +++P+ G +V  +           Q +++++   
Sbjct: 163 LAAAREERTRARAEGAALQAQLANLRLVAPVDG-VVTLREVEPGTTVVAGQAVLEVI-DP 220

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
              ++  ++       +  G  A V          +     + +++P        L
Sbjct: 221 ATLWVDLRLDQVNAGGLAAGLPARVVL---RSRSGEALAGRVLRVEPKADAVTEEL 273



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 53/152 (34%), Gaps = 8/152 (5%)

Query: 36  ILLPIEISVSSS-----GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
            +  +E  V S      G +    +V  I    +G +K+  V+ G ++  G  L   + +
Sbjct: 40  TVARVEEGVVSPALFGIGTVE-ARHVYRIGPTAAGRVKRVDVQVGERVRVGQVLGEMDAV 98

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +  D I  ++ +++  +  +   ++   F   +    +K    +       L +      
Sbjct: 99  DLGDRIRAQEAALERAQAAMREAEARQGFARTQARRYDKLGSLQAASEELALTRRQEL-- 156

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +V   G+++             ++     +L 
Sbjct: 157 EVAEAGLAAAREERTRARAEGAALQAQLANLR 188


>gi|90579167|ref|ZP_01234977.1| hypothetical protein VAS14_05658 [Vibrio angustum S14]
 gi|90440000|gb|EAS65181.1| hypothetical protein VAS14_05658 [Vibrio angustum S14]
          Length = 385

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 72/211 (34%), Gaps = 25/211 (11%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           F+   V +      +    K+  +L +           +  + +    +     K+   +
Sbjct: 76  FKDGDVVKKGQLIAKLDSSKAKADLDKAASSLTTARNKVKRVAELNRKQPGALSKQDFEE 135

Query: 266 LEQNQR-TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS--SSNYAQQSQPLMKIV 322
           L+       AD   +  IL+      +I++P  G       F+  + +    + PL+ I 
Sbjct: 136 LQDAANLAAADYRQQQAILKDY----SIIAPFDG---ELTYFTKSAGSMIDAATPLVSIY 188

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
             +    +   ++   +    KG   TV    Y D+    F  I++ + P +++      
Sbjct: 189 NLN-PVEVSYTISQNDLGKAVKGQPITVTVEAYKDMI---FNGIVDYVAPAVNKNTG--- 241

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                   + I     + ++I L  G  A+V
Sbjct: 242 -------RVAIHARIENPDHI-LAPGMFAQV 264



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 9/89 (10%), Positives = 27/89 (30%), Gaps = 3/89 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +   + ++G  + +G  +   +  +    +D    S+   R  +   K   +    + 
Sbjct: 69  GKLVAIKFKDGDVVKKGQLIAKLDSSKAKADLDKAASSLTTARNKV---KRVAELNRKQP 125

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             L K      +   +     +     + 
Sbjct: 126 GALSKQDFEELQDAANLAAADYRQQQAIL 154


>gi|89897553|ref|YP_521040.1| hypothetical protein DSY4807 [Desulfitobacterium hafniense Y51]
 gi|89337001|dbj|BAE86596.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 422

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 89/267 (33%), Gaps = 39/267 (14%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSS------------SGEILNED 54
           KN ++N       +  +  + ++  +  S L P+  +V +             G++L   
Sbjct: 6   KNNQKNTRKRRVIIYGIIAVLVLASVLASSLKPLAGTVLTVEPKEFVRGFTEEGQVLAAR 65

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
                 S   G I    V NG  + +G  LL  +  +    +   K  ++++      E 
Sbjct: 66  EWPLYTSVD-GKIMAVHVRNGDSVSKGRTLLELDTTDLVYQLTALKAQLRSV------EG 118

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
             L    +    L      +++ LL    +  +   +  +  + +++ +  + LT+    
Sbjct: 119 QHLQTTGDPIKAL-----VQQQTLLIEQAERDALALEQSHSRMKALFDAGAIPLTQYEEA 173

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            L      N     +A L+   +               Q  L   E+I       L+  I
Sbjct: 174 RLQAEKARNVLEQQKAALALLYE---------------QQSLPGTEQIYAGQKDALQAQI 218

Query: 235 HEQKNMLRHINELYDEANLEFANYLKE 261
            + ++ +        E  L   ++LKE
Sbjct: 219 SQLEDRIGKAKVTAPEDGLIKDSHLKE 245


>gi|323969637|gb|EGB64924.1| macA protein [Escherichia coli TA007]
          Length = 263

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 3   LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 62

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 63  QASLYTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 121

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 122 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 174

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 175 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 213


>gi|310119144|ref|XP_003118566.1| PREDICTED: rootletin [Homo sapiens]
          Length = 1590

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 68/205 (33%), Gaps = 9/205 (4%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHSTCS 150
                   +   + LR  +   +  L  L  +   +E++ E   RE Q         +   
Sbjct: 1009 AAERGDVEREAERLRAQLTVAQEGLAALRQELQGVEESREGLHREAQEARRALSDEAREK 1068

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK----NLF 206
             V     S +  ++        S   ++ + E K  +L    ++ Q++ + ++     L 
Sbjct: 1069 DVLLLFNSELRATICRAEQEKASFKRSKEEKEQKLLILEEAQAALQQEASALRAHLWELE 1128

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE---IS 263
            +    ++ +L +  R V     E +    E   +    ++   E   + A    +     
Sbjct: 1129 QAGGDARQELRELHRQVRTLKAENQRRSGEAHELQAQCSQEVLELRRQAAKAEAKHEGAR 1188

Query: 264  RDLEQNQRTFADEMSKLTILEKTRE 288
            +++   QR  A+  +      +  +
Sbjct: 1189 KEVLGLQRKLAEVEAAGEAHGQRLQ 1213



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 72/202 (35%), Gaps = 9/202 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +   L +    S+++    + T + AL   +   +  E+A    +++ L+  G+  +  +
Sbjct: 585 QKQALEEQLAQSLQDQEAQMGTLQQALQGKDALSE--ERAQLLAKQEALERQGRLAAEEA 642

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-------TMMK 203
                   S+  SL         +     +    + L R  L    + L       + M+
Sbjct: 643 ADLRVERDSLESSLLEAQQLATKLQEQLEEEARSAGLARQALQGAPRALPQLLPRKSAME 702

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
              E ++V   ++ Q +       ++LR++    +  +         A    A   +E  
Sbjct: 703 GPLEWSSVPTLEMEQLQSDWEVQEMKLRQDTVRLQRQVAQQEREAQRALESQALAHREAL 762

Query: 264 RDLEQNQRTFADEMSKLTILEK 285
             L++ + T +  +++   + +
Sbjct: 763 AQLQREKETLSLTLAEEKEVAR 784


>gi|213401349|ref|XP_002171447.1| SLA2 [Schizosaccharomyces japonicus yFS275]
 gi|211999494|gb|EEB05154.1| SLA2 [Schizosaccharomyces japonicus yFS275]
          Length = 1094

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 87/234 (37%), Gaps = 18/234 (7%)

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-------IDTEKSALDFL 120
           ++     G  + Q   +L   D     L +  +    + +         I+  +  +D  
Sbjct: 422 QQLMATQGQ-VEQDQMMLQQYDARVKSLENELRQLTISSQAQTNSKDDAIENLREQIDTW 480

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN--- 177
            NKY+ L K +    ++ LD L KY     K  +   ++  R    +  + +++ L    
Sbjct: 481 KNKYEALAKLYTQLRQEHLDLLSKYKQLQLKASSAQEATEKRERLEREMKNKNLELADMI 540

Query: 178 ------RLDLENKSSLLRALLSSHQKDLTMMKNLFEK-NAVSQNDLNQQERIVYKSTLEL 230
                 R +L+N   L +    S ++DL +++   E       ++L+       K   EL
Sbjct: 541 MERDRARHELDNLRRLQQGKTESAERDLRLLQQKAEALERDKASELSSLIGRYTKEVGEL 600

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
             ++  +   +  +    +E    F + ++    +LE  +    + + +L  ++
Sbjct: 601 ENSLRAKDAQIADLGHRLEETERHFQHLIQSKDEELEIQKAAVDESLMQLGEMQ 654



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 68/208 (32%), Gaps = 3/208 (1%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            E I+        + +    R  I+ E+ A +F   +    E   +++E    +     +
Sbjct: 354 LETIQQQQQQLAAQQAADMERQRIEAERQAQEFEAMQRMQAEAQRQAQEAYAREQEKMQN 413

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR-ALLSSHQKDLTMMKNL 205
                +    + +    ++     ++        LEN+   L  +  +        ++NL
Sbjct: 414 QGQLAIMQQQLMATQGQVEQDQMMLQQYDARVKSLENELRQLTISSQAQTNSKDDAIENL 473

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEIS 263
            E+    +N      ++  +   E  + + + K +    +   +  E        +K  +
Sbjct: 474 REQIDTWKNKYEALAKLYTQLRQEHLDLLSKYKQLQLKASSAQEATEKRERLEREMKNKN 533

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
            +L            +L  L + ++ KT
Sbjct: 534 LELADMIMERDRARHELDNLRRLQQGKT 561


>gi|254434089|ref|ZP_05047597.1| efflux transporter, RND family, MFP subunit [Nitrosococcus oceani
           AFC27]
 gi|207090422|gb|EDZ67693.1| efflux transporter, RND family, MFP subunit [Nitrosococcus oceani
           AFC27]
          Length = 397

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 6/159 (3%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQRT 272
           +    E  + ++   L           R +      A         L +   +L+ ++  
Sbjct: 142 EKTDLELALERAKATLNSLEASHALAQRQLTRTQSLAKKRLITEEILNQRETELKVSKAE 201

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A +   +   ++  E+  I +P    +V  +       A    PL+ I+  ++   + A
Sbjct: 202 LAVQRITVKQQQRALEKTVIRAPFKAIVVE-RLGQVGELAMPGTPLIHIL-DAEQILVSA 259

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           K+ P+ I  ++    ATV F         K   ++  +D
Sbjct: 260 KLQPRDIFSLRN--AATVVFIAENHPYSLKLHRVVPALD 296



 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 56/136 (41%), Gaps = 5/136 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +++S E++  +N   + +  + +I    VE G  +  GTPL+  E  +    ++  K ++
Sbjct: 99  ITASAEVITLNNSQ-LNAEVTAVILGLPVEIGQVVAPGTPLVLLEKTDLELALERAKATL 157

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            +L       +  L     +   L K     EE L     +   + +++    I+   + 
Sbjct: 158 NSLEASHALAQRQL----TRTQSLAKKRLITEEILNQRETELKVSKAELAVQRITVKQQQ 213

Query: 164 LKMKLTRMRSIYLNRL 179
             ++ T +R+ +   +
Sbjct: 214 RALEKTVIRAPFKAIV 229


>gi|254229635|ref|ZP_04923046.1| Multidrug resistance efflux pump [Vibrio sp. Ex25]
 gi|151937834|gb|EDN56681.1| Multidrug resistance efflux pump [Vibrio sp. Ex25]
          Length = 371

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 73/200 (36%), Gaps = 10/200 (5%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M  + K  H   ++ + +L I+  + +I      P+       G ++      ++    S
Sbjct: 18  MTADQKFKHW--MRTLIVLFIVLFLYIIIADRHAPLTTEGRVQGYVV------QVAPEVS 69

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    +EN   + +G  L T +D +    ++  ++S+++      T  S  +      
Sbjct: 70  GKVTDVLIENNQSVQKGDVLFTIDDRKYKIALEQAELSLQSAYEKEATLYSQREAALANI 129

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +  F++   +    L    S    +    + + +   ++    +++   N   +E +
Sbjct: 130 ARAQATFDNAHREYTRLLT--LSKQKVISQSTLDNAFAQNQVSRAALKAERQNLKVIEAQ 187

Query: 185 SSLLRALLSSHQKDLTMMKN 204
             + +   ++ +     ++ 
Sbjct: 188 LGVQKGQSTAVRIAKNGIEK 207



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 65/210 (30%), Gaps = 21/210 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +   +     SL+    +  ++Y  R       +  +A   +  ++ T +  L ++  
Sbjct: 95  RKYKIALEQAELSLQSAYEKEATLYSQREAALANIARAQATFDNAHREYTRLLTLSKQKV 154

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +SQ+ L+        S   L+      K +   +     ++                   
Sbjct: 155 ISQSTLDNAFAQNQVSRAALKAERQNLKVIEAQLGVQKGQSTAVRI-------------- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  + +   +       +L+P  G +   Q       A  + PL+  VP     ++
Sbjct: 201 -----AKNGIEKAQLDLANTAVLAPSDGVVTNLQL-EVGTMANTNMPLLTFVPTGS-LWV 253

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            A    K + +V K + A V F        
Sbjct: 254 AADFREKSVANVDKTFHALVTFDANPGSVY 283


>gi|77165025|ref|YP_343550.1| secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
 gi|76883339|gb|ABA58020.1| Secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
          Length = 625

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 66/180 (36%), Gaps = 16/180 (8%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +L    E         ++ L + +R   +       E++ L    ++ +   I +P+ G
Sbjct: 384 ELLAAQQEYLTLRQRSASSTLLDAARKRLELWDMTNGEIAALARRGESLDYVPIHAPLGG 443

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T+V           Q  + LM+I       ++ A+V   ++  V+ G +A V  P+  + 
Sbjct: 444 TVVMKNVV-EGTARQAGETLMRIA-DLSRVWVEAEVYEAELPLVRAGMSAEVHLPYLPNQ 501

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
               F+  I+ + P +                ++IT     + +  L+    AEV   A 
Sbjct: 502 ---VFQGDIDYVYPYLDGDSRTG--------RVRIT---LENPDGVLKPEMYAEVKLKAD 547


>gi|49616623|gb|AAT67172.1| myotonic dystrophy kinase-related CDC42-binding kinase gamma [Homo
           sapiens]
          Length = 1551

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/211 (10%), Positives = 64/211 (30%), Gaps = 22/211 (10%)

Query: 94  DLIDLKKVSIKNLRCHI-DTEKSALDFLNNK-YDVLEKAFESREEQLLDFLGKYHSTCSK 151
             ++  +  ++ LR  + +  +                  +S   Q LD L +  +    
Sbjct: 444 RELEQLRKEVQTLRDRLPEMLRDKASLSQTDGPPAGSPGQDSDLRQELDRLHRELAEGRA 503

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                   + R+   +   ++ +   +      +S  RAL S  ++     + L  + + 
Sbjct: 504 GLQAQEQELCRAQGQQEELLQRLQEAQEREAATASQTRALSSQLEEARAAQRELEAQVSS 563

Query: 212 SQNDLNQQERIVYKSTLELRE--------------------NIHEQKNMLRHINELYDEA 251
               + Q +    +   E  +                       + +  +  + E  ++A
Sbjct: 564 LSRQVTQLQGQWEQRLEESSQAKTIHTASETNGMGPPEGGPQEAQLRKEVAALREQLEQA 623

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           +    +  +E    L++  R  + E  +L  
Sbjct: 624 HSHRRSGKEEALCQLQEENRRLSREQERLEA 654


>gi|317419775|emb|CBN81811.1| Slow myosin heavy chain 2 [Dicentrarchus labrax]
          Length = 1975

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 77/192 (40%), Gaps = 5/192 (2%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
               + +   L+  I+     ++  N     L+K   + ++ L ++  KY  + +++ +  
Sbjct: 1409 SSLEKTKHRLQGEIEDLMVDVERSNAAAAALDKKQRNFDKVLAEWKQKYEESQTELESAQ 1468

Query: 157  ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
              +  RSL  +L ++++ Y   LD       ++    + Q++++ +     +   S ++L
Sbjct: 1469 KEA--RSLSTELFKLKNSYEESLD---HLETMKRENKNLQEEISDLTEQLGEGGKSIHEL 1523

Query: 217  NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             +  + + +  +E++  + E +  L H       + LE      +I R L + +      
Sbjct: 1524 EKIRKQLEQEKVEIQTALEEAEGSLEHEEGKILRSQLELNQVKADIERKLAEKEEEMEQA 1583

Query: 277  MSKLTILEKTRE 288
                  +  T +
Sbjct: 1584 KRNNQRVVDTLQ 1595



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 77/229 (33%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   LR  +D   S ++ +      +EK   + E+Q+ ++  K 
Sbjct: 1203 QIDNLQRVKQKLEKEKS--ELRLELDDVVSNMEQIIKVKANMEKMCRTLEDQMSEYKTKA 1260

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                  R L+ K + +  +   +     +   LR  L    
Sbjct: 1261 EEGQRTINDFTMQKAKLQTENGEFARQLEEKDSLVSQLTRGKQSYTQQIEDLRRQLEEEV 1320

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  + +    + L +Q     ++  EL+ ++ +  + +      Y+   ++  
Sbjct: 1321 KAKNALAHAVQSSRHDCDLLREQYEEEQEAKAELQRSMSKANSEVAQWRTKYETDAIQRT 1380

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   + +        + E+      + G I     
Sbjct: 1381 EELEEAKKKLAQRLQDAEEAVEAANAKCSSLEKTKHR--LQGEIEDLMV 1427



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 72/222 (32%), Gaps = 15/222 (6%)

Query: 85   LTFEDI-ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE------SREEQ 137
            L  +D     D +      ++     +  E   L  +  + +   K  E      S   Q
Sbjct: 1652 LQLDDTLRANDDLKENIAIVERRNNLLQAELDELRSVVEQTERGRKLAEQELLDVSERVQ 1711

Query: 138  LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            LL           K      + +   ++  +   R+           ++++   L   Q 
Sbjct: 1712 LLHSQNTSLLNQKKKLEGDTAQLQNEVEEAVQECRNAEEKAKKAVTDAAMMAEELKKEQD 1771

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                ++ + +    +  DL  Q R+     + ++    + + +   + EL  E ++E   
Sbjct: 1772 TCAHLERMKKNMEQTIKDL--QHRLDEAEQIAMKGGKKQIQKLEARVRELETEVDMEQKR 1829

Query: 258  Y------LKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                   +++  R +++      ++   L+ L+   ++  + 
Sbjct: 1830 SSDSVKGIRKYERRIKELTYQTDEDKKNLSRLQDLMDKLQLK 1871



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 73/210 (34%), Gaps = 17/210 (8%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  E +E    ++  + S+++    I   +S L+    K D+  K  E  EE  ++   +
Sbjct: 1530 LEQEKVEIQTALEEAEGSLEHEEGKI--LRSQLELNQVKADIERKLAEKEEE--MEQAKR 1585

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +          + S  RS    L   + +  +  ++E + S      +  QK L  +  
Sbjct: 1586 NNQRVVDTLQTSLESETRSRNEALRVKKKMEGDLNEMEIQLSQANRQAAEAQKQLKGVHT 1645

Query: 205  LFEKNAVSQNDLNQQ-----------ERIVYKSTLELRE--NIHEQKNMLRHINELYDEA 251
              + + +  +D  +            ER       EL E  ++ EQ    R + E     
Sbjct: 1646 HLKDSQLQLDDTLRANDDLKENIAIVERRNNLLQAELDELRSVVEQTERGRKLAEQELLD 1705

Query: 252  NLEFANYLKEISRDLEQNQRTFADEMSKLT 281
              E    L   +  L   ++    + ++L 
Sbjct: 1706 VSERVQLLHSQNTSLLNQKKKLEGDTAQLQ 1735



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 66/201 (32%), Gaps = 4/201 (1%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +  DL    +   + L        + ++    +    +K     EE  L       +   
Sbjct: 1132 QRADLARELEEISERLEEAGGATAAQIEMNKKREAEFQKMRRDLEEATLQHEATAATLRK 1191

Query: 151  KVFNYGI---SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            K  +        +    ++K    +     RL+L++  S +  ++        M + L +
Sbjct: 1192 KNADSVADLGEQIDNLQRVKQKLEKEKSELRLELDDVVSNMEQIIKVKANMEKMCRTLED 1251

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            + +  +    + +R +   T++  +   E     R + E  D    +     +  ++ +E
Sbjct: 1252 QMSEYKTKAEEGQRTINDFTMQKAKLQTENGEFARQLEE-KDSLVSQLTRGKQSYTQQIE 1310

Query: 268  QNQRTFADEMSKLTILEKTRE 288
              +R   +E+     L    +
Sbjct: 1311 DLRRQLEEEVKAKNALAHAVQ 1331


>gi|198470278|ref|XP_002133416.1| GA22886 [Drosophila pseudoobscura pseudoobscura]
 gi|198145376|gb|EDY72044.1| GA22886 [Drosophila pseudoobscura pseudoobscura]
          Length = 1343

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 75/211 (35%), Gaps = 9/211 (4%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL------DFLGKYH 146
             + ++ +   ++ L   +  ++  L+      + L +  ++R+EQL       D L +  
Sbjct: 791  EEQLEKQATDLEQLTEQVQAKEEQLEKQATDLEQLTEQVQARDEQLSTFQQSEDKLKQMV 850

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE---NKSSLLRALLSSHQKDLTMMK 203
                   +     +  +++ K       Y     L+    + + L     + Q+ +  ++
Sbjct: 851  QQTYDSLSQEKIELIHAVQQKHAENTQYYEEIQRLQPFAQQVAELVRERETLQEQVRRVQ 910

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L EK+ +    L  ++    ++  E +E     +  L  +     E          ++ 
Sbjct: 911  ELKEKSEMRITSLLAEQSSQAQAAREAQEQQASVQRDLERLRAHLLEVEELHTQETVDLQ 970

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            R+L++++        +++         +I +
Sbjct: 971  RELDESRTKLTVLQQEVSKSSTAYTSASIRA 1001



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 80/235 (34%), Gaps = 24/235 (10%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV-LEKAFESREEQLLDFLGK-- 144
               +       ++ S++     +      ++ L+ +  V L++  +    +L     +  
Sbjct: 929  SQAQAAREAQEQQASVQRDLERLRAHLLEVEELHTQETVDLQRELDESRTKLTVLQQEVS 988

Query: 145  -----------YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                         +  ++      + + +     L ++       +  +   + L+  L 
Sbjct: 989  KSSTAYTSASIRANQQAETLQTQHALLQQQRDELLAKLGQCEDREMKQQAALTNLQCALE 1048

Query: 194  SHQKDLTMMKNLFEKNAVS--QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
              Q D      +  +      +  L++Q+R+  +    +++ + E    LR    L D+ 
Sbjct: 1049 QFQNDKEHDIEMATQRIRREMKAHLDRQDRLQAEMEA-MQQQLAEANRGLRAAARLSDQ- 1106

Query: 252  NLEFANYLKEISRDLEQNQRTFADEMSKL-----TILEKTREQKTILSPIAGTIV 301
             LE       + RD  ++ +   D++ K+     +      ++  I S + G +V
Sbjct: 1107 -LEAGQQTIAVLRDEVESLKEANDQLEKMLNSSESSQTDKIDKSLIKSLVIGYVV 1160


>gi|149279129|ref|ZP_01885262.1| multidrug resistance protein A [Pedobacter sp. BAL39]
 gi|149230131|gb|EDM35517.1| multidrug resistance protein A [Pedobacter sp. BAL39]
          Length = 349

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 89/274 (32%), Gaps = 24/274 (8%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +     + +    LK   +++ +I  N+       S+        ++DL   + L+++ +
Sbjct: 94  QQAEADLLAAKADLKSAESQLPTIGSNKDVAAAGVSVEEIAAQKAKRDLLRDEALYKEGS 153

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           ++        R    S    + ++    +    +++   +            +  + + Q
Sbjct: 154 ITL-------RQYENSQSAYQTSVKLLASSKTKVSQAGTQTGT--------ANAQIARAQ 198

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            T A   + L   +       +++PI G +            Q  Q    I   +   +I
Sbjct: 199 ATIAARETALKRAQLDLSYTKMIAPINGKVGKTNLKKGQLVQQGQQLFSLI--SNDQYWI 256

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
            A     QI+H+K G T  +    Y       K     +      S    +  T  + +V
Sbjct: 257 IANFKETQIEHMKVGQTVHIVIDGYPDQEITGKVSGFSDATGAKFSLLPPDNSTGNFVKV 316

Query: 390 ILKIT-----DLAFSDNNIELRNGFPAEVLFTAK 418
             ++      D A S   I L+ G   EV    K
Sbjct: 317 TQRVPVMISIDSAESLKEI-LKAGLSVEVDVKVK 349



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 69/202 (34%), Gaps = 17/202 (8%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E N V + S  SG I++F + +   +  G  ++  +D E    +   +  +   +  + +
Sbjct: 50  ETNAVPVISRVSGYIQQFSLTDYQTVKAGDTIVWIDDSEYLLTVQQAEADLLAAKADLKS 109

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +S L  + +  DV        E              +      I+            +R
Sbjct: 110 AESQLPTIGSNKDVAAAGVSVEEIAAQKAKRDLLRDEALYKEGSIT------------LR 157

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
               ++   +    LL +  +   +  T       + A +Q  +  +E  + ++ L+L  
Sbjct: 158 QYENSQSAYQTSVKLLASSKTKVSQAGTQTGTANAQIARAQATIAARETALKRAQLDL-- 215

Query: 233 NIHEQKNMLRHINELYDEANLE 254
                  M+  IN    + NL+
Sbjct: 216 ---SYTKMIAPINGKVGKTNLK 234


>gi|89107729|ref|AP_001509.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli str. K-12 substr. W3110]
 gi|90111182|ref|NP_415399.4| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli str. K-12 substr. MG1655]
 gi|170080537|ref|YP_001729857.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli str. K-12 substr. DH10B]
 gi|238900137|ref|YP_002925933.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli BW2952]
 gi|6226416|sp|P75830|MACA_ECOLI RecName: Full=Macrolide-specific efflux protein macA; Flags:
           Precursor
 gi|4062462|dbj|BAA35597.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli str. K12 substr. W3110]
 gi|87081796|gb|AAC73965.2| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli str. K-12 substr. MG1655]
 gi|169888372|gb|ACB02079.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli str. K-12 substr. DH10B]
 gi|238861701|gb|ACR63699.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Escherichia coli BW2952]
 gi|260449975|gb|ACX40397.1| efflux transporter, RND family, MFP subunit [Escherichia coli DH1]
          Length = 371

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSAMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|325927210|ref|ZP_08188470.1| multidrug resistance efflux pump [Xanthomonas perforans 91-118]
 gi|325542408|gb|EGD13890.1| multidrug resistance efflux pump [Xanthomonas perforans 91-118]
          Length = 307

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 74/217 (34%), Gaps = 19/217 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V +            +  E +  + + +  +     L D    E A   +    ++++ 
Sbjct: 77  VVDRARYAIALEQARAALAERQATLTQLRREIARDRSLQDLVAAEDAEVRR---SNVQKA 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   A   S + + +   ++  + SP  G +   ++    +Y    +P++ ++  +    
Sbjct: 134 QAAVATAQSAVDLAQLNLDRTQVRSPADGRVSD-RTVRVGDYVNAGRPVVAVL-DTGSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQD 378
           +       ++Q V  G    V+        +   ++I   I+           P ++   
Sbjct: 192 VDGYFEETRLQGVHPGQRVDVQLMGEPVTLQGHVQSIAAGIEDRYRSGSAGALPNVTPAF 251

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + ++  +   V + +  +     +++L  G  A V  
Sbjct: 252 DWVRLAQRIPVRIVLDRV---PAHVQLIAGRTATVSI 285



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/129 (10%), Positives = 43/129 (33%), Gaps = 6/129 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++    SG+++   V +   + +G  L   +       ++  + ++   +  + 
Sbjct: 43  VGADVMQVAPDVSGLVESVAVADNQPVTRGQLLFVVDRARYAIALEQARAALAERQATLT 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +  +    +  D++        E             + V     +     L +  T++
Sbjct: 103 QLRREIARDRSLQDLVAA------EDAEVRRSNVQKAQAAVATAQSAVDLAQLNLDRTQV 156

Query: 172 RSIYLNRLD 180
           RS    R+ 
Sbjct: 157 RSPADGRVS 165


>gi|227356763|ref|ZP_03841148.1| macrolide-specific efflux protein [Proteus mirabilis ATCC 29906]
 gi|227163053|gb|EEI47988.1| macrolide-specific efflux protein [Proteus mirabilis ATCC 29906]
          Length = 369

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 56/177 (31%), Gaps = 8/177 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +   V+++G++     V ++ +  SG ++   V+ G  + +G  L   +  +  + + 
Sbjct: 44  GELSKEVTATGKLDAVRKV-DVGAQVSGQLQTLYVKEGDVVKKGDLLAIIDPKKAQNEVA 102

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES---REEQLLDFLGKYHSTCSKVFN 154
             + +   L  ++   K+ L      Y    K   +    +E+L           ++V  
Sbjct: 103 ESQETNNELTANLQQAKAELRLAQLTYQRQLKLIGTHVIAQEELDRTKTDVEVKKARVAT 162

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRL----DLENKSSLLRALLSSHQKDLTMMKNLFE 207
           Y          +   R    Y         +      L        ++   +  L +
Sbjct: 163 YEAQIRKNQATLDTARTNLQYTRITAPMDGVVTFIKTLEGQTVIAAQEAPTILTLAD 219



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/215 (10%), Positives = 68/215 (31%), Gaps = 24/215 (11%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL--------YDEANLEFANYLKEIS 263
           +QN++ + +    + T  L++   E +                   +  L+      E+ 
Sbjct: 97  AQNEVAESQETNNELTANLQQAKAELRLAQLTYQRQLKLIGTHVIAQEELDRTKTDVEVK 156

Query: 264 RDLEQN-QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMK 320
           +      +       + L       +   I +P+ G + + ++          +   ++ 
Sbjct: 157 KARVATYEAQIRKNQATLDTARTNLQYTRITAPMDGVVTFIKTLEGQTVIAAQEAPTILT 216

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +        ++A+V+   + ++K    A+  F        K F   ++     I      
Sbjct: 217 LA-DLDTMLVKAEVSEADVIYLKPDLKAS--FTVLGAPD-KAFNGKLK----DILPTPEK 268

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +    +Y    ++ +     + + L+    A+V  
Sbjct: 269 INDAIFYYARFEVPNE---QHLLRLQ--MTAQVKI 298


>gi|221234198|ref|YP_002516634.1| periplasmic multidrug efflux lipoprotein [Caulobacter crescentus
           NA1000]
 gi|220963370|gb|ACL94726.1| periplasmic multidrug efflux lipoprotein precursor [Caulobacter
           crescentus NA1000]
          Length = 371

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 26/261 (9%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+   +   R        L     L    ++S+  +L       +  AVS+  +  + + 
Sbjct: 43  SVTQTVVAERPFTDRIEVLGAAKGLQSVTITSNTAELITAVRFTDGQAVSRGQVLVELKA 102

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
             +        I E +  L      Y       A+         EQ+   +    + +  
Sbjct: 103 EAEDAG-----IAEARARLAQAERDYKRWKT-LADQGIAPRATAEQSLAAYETAKAVVDS 156

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI--Q 340
               +  + I +P AG +      +             IV     + IR   +      +
Sbjct: 157 ARANKLDRVIRAPFAGRV-GISDVAPGMLISPGTA---IVTLDDTSVIRVDFSVPDRYLE 212

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            ++ G     +           F+  I ++D  I      ++               F +
Sbjct: 213 TLRIGLPINAQPDALPGET---FRGRIAQLDTRIDTTTRAIK-----------ARAEFPN 258

Query: 401 NNIELRNGFPAEVLFTAKNTT 421
            N  L+ G   +V       T
Sbjct: 259 ANGRLKPGMLVKVAIDKGVRT 279


>gi|218663422|ref|ZP_03519352.1| putative multidrug efflux transporter protein [Rhizobium etli
           IE4771]
          Length = 324

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 60/210 (28%), Gaps = 23/210 (10%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            ++ L   E   E  ++     E   + ++   + L++ +   +Q        +S L   
Sbjct: 57  AEANLAAAERGVETADLANKRAEQLFDKSVAPKSQLEQAALSHDQAVSQRDAALSALDQA 116

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +       + +   G +    +            ++  V       ++  V    I   K
Sbjct: 117 KNQVSYTDLKAGQNGIVTAINAD-IGQVVGSGTAVIT-VAVDGEKEVQIAVPENDIAQFK 174

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G T    F     +        + ++     QQ         + V + +       N+ 
Sbjct: 175 PGKTVKASFWADDGL---VLDGTVREVSGSADQQSRT------FAVRVSL------PNDP 219

Query: 404 ELRNGFPA--EVLFTAKNTTLAQEIIHPIT 431
            +  G  A  E   +  N      +  P++
Sbjct: 220 RVLLGMTATIEADISNGN----SYVSIPLS 245



 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/104 (11%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I +  V+ G ++  G  L   +  +        ++++K    ++   +  ++  +   
Sbjct: 23  GKITERLVDIGDRVTPGDTLARIDATDY-------QLAVKTAEANLAAAERGVETADLAN 75

Query: 125 DVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              E+ F+     +  L+     H       +  +S++ ++   
Sbjct: 76  KRAEQLFDKSVAPKSQLEQAALSHDQAVSQRDAALSALDQAKNQ 119


>gi|150372998|dbj|BAF66264.1| multidrug efflux transporter VexA [Vibrio cholerae]
          Length = 368

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 21/206 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S   + + + +V   +   R N+   +  L      Y+     FA          ++ + 
Sbjct: 87  SGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKG-SISKESYDEAEA 145

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           ++    + +  L+ T  ++ I +P AG I     F    Y Q       IV     + +R
Sbjct: 146 SYYALSADIESLKATIARREIKAPFAGVIGIRNVF-LGQYLQPGT---DIVRLEDTSVMR 201

Query: 332 AK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
            +  V  + I  +       +    Y       FK  I  I+P +S Q   +Q Q     
Sbjct: 202 LRFTVPQRDISRISLDQEVDIFVDAYPQT---SFKGSISAIEPAVSVQSGLIQVQ----- 253

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
                     +++ +LR+G  A    
Sbjct: 254 ------ADIPNSDGKLRSGMFARANI 273



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 52/138 (37%), Gaps = 1/138 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +   E+G+Q+ +  PL+  +       +   +  +   +   +  K      +   
Sbjct: 78  GVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKGSISK 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  ++A  S      D      +   +      + V     + L +      + + LE+ 
Sbjct: 138 ESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLED- 196

Query: 185 SSLLRALLSSHQKDLTMM 202
           +S++R   +  Q+D++ +
Sbjct: 197 TSVMRLRFTVPQRDISRI 214


>gi|149926120|ref|ZP_01914383.1| secretion protein HlyD [Limnobacter sp. MED105]
 gi|149825408|gb|EDM84619.1| secretion protein HlyD [Limnobacter sp. MED105]
          Length = 549

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 62/191 (32%), Gaps = 33/191 (17%)

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            +   E    L + +R         + ++ ++    + + +  I +P +G +        
Sbjct: 220 RKMRGENLQPLVDAARQRMLQVGMSSAQIRQVEQSGQVQPRVAIAAPRSGVVTDLMVR-E 278

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q    LM+I       +++A+V   Q  +V+ G   +VR      +  + F+  ++
Sbjct: 279 GMTVQPGSTLMEINGL-STVWVQAEVPESQAAYVQPG--VSVRATA-QAMPGQVFEGQVQ 334

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF-----------------PA 411
            + P ++     +           +  L  ++   +L  G                  P+
Sbjct: 335 TVLPQVNANSRTV-----------LARLVLNNPGNKLLPGMFVQTRFMDTRRPETMIIPS 383

Query: 412 EVLFTAKNTTL 422
           E +       +
Sbjct: 384 EAVIQTGRRAV 394



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           SG++      V I +P SG++    V  G  +  G+ L+    + T
Sbjct: 254 SGQVQP---RVAIAAPRSGVVTDLMVREGMTVQPGSTLMEINGLST 296


>gi|78486120|ref|YP_392045.1| secretion protein HlyD [Thiomicrospira crunogena XCL-2]
 gi|78364406|gb|ABB42371.1| RND membrane fusion protein [Thiomicrospira crunogena XCL-2]
          Length = 427

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 91/288 (31%), Gaps = 22/288 (7%)

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +D + +  S         I+S   +       ++  +  R     K +L + + +  +  
Sbjct: 66  MDLVKQRFSQMDSAPEIQINSSASAADGSAVGLQQQFSIRTAKAEKHTLWKYMPTFGKVV 125

Query: 199 LTMMKNL----FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY--DEAN 252
               K +         +S   +      + K  L  R    E     +   ++       
Sbjct: 126 ADETKVVHVHPRASGWISDLAVRNNGDAIEKGQLLYRIYSPEIVAAQQDYLQVIHNQRRL 185

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            + AN L + ++   Q     A  +  L        +  + +P  G +      +   Y 
Sbjct: 186 GQQANSLVDSAKVRLQLLGLDARTIKALAKKGTPIHKVPVYAPQTGFVNDLSVQT-GMYV 244

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           Q    LM ++      ++ A+V P Q   +K+G T  ++ P Y     K +++ I+ + P
Sbjct: 245 QPQTELMSLM-DLSTVWVEAEVLPLQQDWLKEGLTVDIKTPAYP---GKHWESQIDYLYP 300

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                         ++V +       ++   + +     E +      
Sbjct: 301 TADPVTQA------FKVRIP-----LNNTQQKFKPNMLVETIIYGGPK 337



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 28/82 (34%), Gaps = 2/82 (2%)

Query: 48  GEILNEDNVVEIKSP-FSGIIKKFQVEN-GSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           G+++ ++  V    P  SG I    V N G  I +G  L      E           I N
Sbjct: 122 GKVVADETKVVHVHPRASGWISDLAVRNNGDAIEKGQLLYRIYSPEIVAAQQDYLQVIHN 181

Query: 106 LRCHIDTEKSALDFLNNKYDVL 127
            R       S +D    +  +L
Sbjct: 182 QRRLGQQANSLVDSAKVRLQLL 203


>gi|71905937|ref|YP_283524.1| secretion protein HlyD [Dechloromonas aromatica RCB]
 gi|71845558|gb|AAZ45054.1| Secretion protein HlyD [Dechloromonas aromatica RCB]
          Length = 379

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 94/298 (31%), Gaps = 31/298 (10%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-----LENKSS 186
            +++ Q    +       +++    + +   +  +++         RL      +  + +
Sbjct: 25  AAKQAQDPSIVHPSPELLAQLKLADLETKAVAETLRVAGRIDFDEQRLARIGATVTGRVT 84

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM------ 240
            + ALL    K   ++  L      SQ    Q   +  ++ LEL     E+         
Sbjct: 85  DIDALLGQSVKKGEVLARLNSSELSSQ----QLAYLKARAQLELNRRNAERAKALFDADV 140

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           +        E+  + +      + D  Q        + +L           + + + G +
Sbjct: 141 IGAAELQRRESEFQISVAETRAASDQLQLLGVSRAAIDRLGKQGAVDSVTPVTATLNGVV 200

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           V  +  +     Q +  L  +V      +  A+V  +Q+  VK G + ++  P   + + 
Sbjct: 201 VE-RKLAQGQVVQPADALF-VVADLSRLWAVAQVPEQQVSQVKSGQSVSIEVPALGNEK- 257

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +  +   I  +           V+++       +    L+    A +L  AK
Sbjct: 258 --LVGKLIFVGQTIDPETRT--------VLVRT---ELDNREGRLKPAMLASMLIEAK 302



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/136 (10%), Positives = 47/136 (34%), Gaps = 5/136 (3%)

Query: 40  IEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +  ++  +G I  ++  +  I +  +G +       G  + +G  L        +  +  
Sbjct: 55  VAETLRVAGRIDFDEQRLARIGATVTGRVTDIDALLGQSVKKGEVLARLN----SSELSS 110

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           ++++    R  ++  +   +     +D         + +  +F      T +      + 
Sbjct: 111 QQLAYLKARAQLELNRRNAERAKALFDADVIGAAELQRRESEFQISVAETRAASDQLQLL 170

Query: 159 SVYRSLKMKLTRMRSI 174
            V R+   +L +  ++
Sbjct: 171 GVSRAAIDRLGKQGAV 186


>gi|116748210|ref|YP_844897.1| RND family efflux transporter MFP subunit [Syntrophobacter
           fumaroxidans MPOB]
 gi|116697274|gb|ABK16462.1| efflux transporter, RND family, MFP subunit [Syntrophobacter
           fumaroxidans MPOB]
          Length = 385

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 66/178 (37%), Gaps = 14/178 (7%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELY---------DEANLEFANYLKEISRDL 266
           +N+ E  +  +  +L +   +     R +N             +   E    ++  +  +
Sbjct: 105 VNKDEAGLKMARAQLLQAKVDLDRARRELNRAQKLKDGGLVTGQELDERRTAMESAAARV 164

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
              +       S+L        +  + +PI GT+   +     ++  +  PL  IV  ++
Sbjct: 165 ALAEAQVGQSESQLAESRHNLAKTIVRAPIQGTVYQRKVD-VGDWVDKGTPLFSIV-DNR 222

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +    A V    +  V++G   T       +     F+  I++I+P+++  D + + Q
Sbjct: 223 VLDFTANVPAVDLARVREGQLLTFLVDGLPNR---VFEGKIKRINPMVNNSDRSGRVQ 277



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 51/170 (30%), Gaps = 13/170 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++  V   G +  +    E+KS   G I K QV+   ++     LL  +  +   +++  
Sbjct: 50  LKSVVEVFGSLSPKTAT-EVKSEQPGRILKVQVKEWDRVNPDDVLLELDPTDFKLVVNKD 108

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +K  R  +   K  LD               RE      L        +  +   ++
Sbjct: 109 EAGLKMARAQLLQAKVDLDRAR------------RELNRAQKLKDGGLVTGQELDERRTA 156

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +  +          +  +   L      L   +       T+ +   +  
Sbjct: 157 MESAAARVALAEAQVGQSESQLAESRHNLAKTIVRAPIQGTVYQRKVDVG 206


>gi|301024391|ref|ZP_07188078.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           196-1]
 gi|299880398|gb|EFI88609.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           196-1]
          Length = 339

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 79  LRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 138

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 139 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 197

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 198 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 250

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 251 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 289



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 14  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 72

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 73  EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDL--DTAATEMAVKQAQIGT 130

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 131 IDAQIKRNQASLDTAKTN 148


>gi|261335024|emb|CBH18018.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 865

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 66/201 (32%), Gaps = 4/201 (1%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                ++++      +R  ++ +K   +    K +V     ++ +E+      +      
Sbjct: 493 RRKRQVNIEVAKSAMIRDALEKQKRLFECAERKLEVEANRAKNLQERERLIELRNERLQE 552

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +           L  +      I L +     +    +  L   Q+ L   +    +  
Sbjct: 553 MMMEKVRRKREEDLIAQQNAAARIKLQQERNAEREKEYQREL---QERLERAEERTARQQ 609

Query: 211 VSQNDLNQQERIVYKSTLELRE-NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +++ L +Q RI  K   E R+  I     M    +E+      E    ++ +  + E+ 
Sbjct: 610 AARDHLLEQRRIRRKKNAEERQARIERMAEMQEQQSEILRRKYEERDAKVQLVQEERERK 669

Query: 270 QRTFADEMSKLTILEKTREQK 290
           QR   + ++      +   ++
Sbjct: 670 QREAQELLAARAAKSQELREQ 690


>gi|87116410|dbj|BAE79361.1| myosin heavy chain embryonic type 1 [Cyprinus carpio]
          Length = 1932

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 78/199 (39%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N+    L+K   + ++ L ++  KY    +++   G  
Sbjct: 1413 LEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYEEGQAEL--EGAQ 1470

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   L+    + Q++++ +     +   S ++L +
Sbjct: 1471 KEARSLSTELFKMKNSYEESLD---QLETLKRENKNLQQEISDLTEQLGETGKSIHELEK 1527

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      EI R L +          
Sbjct: 1528 AKKAVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKLAEKDEEMEQIKR 1587

Query: 278  --SKLTILEKTREQKTILS 294
               ++    ++     + S
Sbjct: 1588 NSQRVIESMQSNLDSEVRS 1606



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 76/229 (33%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1205 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKAKANLEKLCRTLEDQLSEIKSKN 1262

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++                  R L+ K   +  +   +     ++  L+  +    
Sbjct: 1263 DENIRQINDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQTEELKRQIEEEV 1322

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1323 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1382

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1383 EELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLMI 1429



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 74/226 (32%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + +  K      L   I+ E+S    L  K   L+   
Sbjct: 1055 EGDLKLAQESIMDLENDKQQSDEKLKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1114

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1115 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1168

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1169 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1223

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +       + +   +LE+  RT  D++S++        ++ 
Sbjct: 1224 KMEIDDLSSNMEAVAKAKANLEKLCRTLEDQLSEIKSKNDENIRQI 1269


>gi|315135527|dbj|BAJ42686.1| macrolide transporter subunit MacA [Escherichia coli DH1]
          Length = 365

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 105 LRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 164

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 165 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSAMLVKAQV 223

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 224 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 276

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 277 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 315



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 40  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 98

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 99  EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDL--DTAATEMAVKQAQIGT 156

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 157 IDAQIKRNQASLDTAKTN 174


>gi|198277068|ref|ZP_03209599.1| hypothetical protein BACPLE_03276 [Bacteroides plebeius DSM 17135]
 gi|198269566|gb|EDY93836.1| hypothetical protein BACPLE_03276 [Bacteroides plebeius DSM 17135]
          Length = 359

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 60/208 (28%), Gaps = 17/208 (8%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + + Q + +     + ++      K  L+   + Y     E             + Q   
Sbjct: 97  SRVRQGQLLATLDEVSMQNTYQAAKAALKQAEDAYQRMK-ELHEKGSLAEMKWVEVQSKL 155

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               S   +  K      + +P +G I   +S            ++K+V       +R  
Sbjct: 156 QQAQSMEAVARKNLTDCQLYAPFSGVIAE-KSLEVGQNVVPGVQVLKLV-SDDRLKVRIS 213

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V   +I  V +G  A +  P    I+    + ++        +          YEV +  
Sbjct: 214 VPEPEIARVARGQKAVIEAPVLNGIKA---EGVV------TEKGVQANPLSRSYEVNI-- 262

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                   N  L  G   EV     + +
Sbjct: 263 ---GIQTKNTGLLPGMVTEVWLQDADKS 287


>gi|209542424|ref|YP_002274653.1| multidrug resistance protein MdtN [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209530101|gb|ACI50038.1| secretion protein HlyD family protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 344

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 47/419 (11%), Positives = 114/419 (27%), Gaps = 98/419 (23%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             +  +  ++ +G   L+    +   + +  SS     +  +V + S   G +    V  
Sbjct: 5   KPVGLIIAVACVGAAVLLG-VHVANEDSAHPSSDSGSIDAEIVHMASTVGGRLVDLPVHV 63

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L   +                                           E  
Sbjct: 64  NQAVRKGDLLYRLDP------------------------------------------EPY 81

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           E  +           ++V N       ++    + +             +++  R     
Sbjct: 82  ELTVRQAQANLALAQAEVENQRRLVSVKTADAAVAQ------------AQTARARTNRDL 129

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             + +  +  L     +     +Q    +  + + L +   ++      I          
Sbjct: 130 AARTVERLSPLAGHAYIPLQQYDQARVALRDAEISLEQAHRQEAAAQTAIG--------- 180

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                     DL           + L        Q T+++P+ G +   +          
Sbjct: 181 ----------DLNSTLAARDAAAAALDHARYELRQTTVVAPLDGYVTSLRV-KPGEILAP 229

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--- 371
           +Q L  ++  +   Y  A +    ++ ++ G  ATV        R    +  ++ I    
Sbjct: 230 AQVLFTLI-ANDAWYANANIREVDLRPIRPGDCATVH-SMID--RHVAIRGHVDSIGWGV 285

Query: 372 ------------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                       P++ ++ + +   + + V +KI     +D N+ LR G  A V     
Sbjct: 286 LSADSAGSARALPVVPREMDWVHVAQRFPVRVKID---RADPNL-LRLGATATVEIRHG 340


>gi|153833359|ref|ZP_01986026.1| membrane-fusion protein [Vibrio harveyi HY01]
 gi|148870368|gb|EDL69294.1| membrane-fusion protein [Vibrio harveyi HY01]
          Length = 378

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G I+   + V IKS   GI+ +  V+ G ++ QG  L+      T   +   
Sbjct: 42  IEKQAVAVGNIVPA-HSVSIKSQIDGIVGEMYVQVGEKVKQGQALIKVRPNPTPQALTDA 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
              +  +R   D E +     N +  V +    +  ++ +       S  + V     + 
Sbjct: 101 STDL--MRSEADLESAKQKLANLESLVKQDIIPNNYDEYVSARSAVKSAQANVLQKRQNL 158

Query: 159 SVYRSLKMKLTRMR-----------SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLF 206
            + RS +  +   R           ++   ++++ E   S   +  ++    L  M +L 
Sbjct: 159 ELIRSGEASIGDARLTSTIYAPIDGTVLNRKVEVGEPIISTESSQAATEMMSLADMNSLI 218

Query: 207 EKNAVSQNDLNQQ 219
            K +VS++D  Q 
Sbjct: 219 FKGSVSEHDAAQL 231



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 21/219 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +  DL + E  +  +  +L       K  +  I   YDE  +   + +K    ++ Q ++
Sbjct: 100 ASTDLMRSEADLESAKQKLANLESLVKQDI--IPNNYDEY-VSARSAVKSAQANVLQKRQ 156

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHS 325
                 S    +   R   TI +PI GT++  +              Q +  +M +    
Sbjct: 157 NLELIRSGEASIGDARLTSTIYAPIDGTVLNRKV-EVGEPIISTESSQAATEMMSLA-DM 214

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
                +  V+      +  G   ++    Y D+   +   ++ K+  I S+  N+ +   
Sbjct: 215 NSLIFKGSVSEHDAAQLSPGMPVSLTVAPYPDM---EISGVLTKV-AIQSENLNSPEGNA 270

Query: 386 YYE-----VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +       +++ +L      I LR+GF +    T K 
Sbjct: 271 TAKSFDNGFEVEVGELKI-PKEILLRSGFSSTAQITLKK 308


>gi|159044836|ref|YP_001533630.1| secretion protein [Dinoroseobacter shibae DFL 12]
 gi|157912596|gb|ABV94029.1| secretion protein [Dinoroseobacter shibae DFL 12]
          Length = 365

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 76/236 (32%), Gaps = 24/236 (10%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           ++ +++      S   + F   +     +L   L  + +   + +  +   +  R  L +
Sbjct: 70  DDAIVEAGDPLFSLDPRPFELAVRQAEANLNTALQTVDASGASLVAAQAAVTQARTALEN 129

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q +      L E+  V+    +     V  +  +L                  D+A   
Sbjct: 130 TQAEADRTFQLEERGIVATARGDDARAAVESAQAQL------------------DQAEAN 171

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             +   ++  +   N  T     ++L   +      T+ +P  G +      S   +   
Sbjct: 172 LDSARAQLGPEGADN-PTIQAATAQLEQAQYDLASTTVTAPHLGVVTNVTL-SEGQFIGA 229

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             P +  +  ++  +I   +   Q+Q ++ G  A V F          F+  ++ I
Sbjct: 230 GSPALTFI-DAEAGWITVDLRENQLQKIEAGDPARVLFDALPGRI---FEGRVQSI 281



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 52/174 (29%), Gaps = 8/174 (4%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
              ++  V SS   +   NVV+I    SG I +  V + + +  G PL + +       +
Sbjct: 33  YALMDRYVPSSPRGIVSANVVQIAPRVSGTITRVHVADDAIVEAGDPLFSLDPRPFELAV 92

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ-----LLDFLGKYHSTCSK 151
              + ++      +D   ++L            A E+ + +      L+  G   +    
Sbjct: 93  RQAEANLNTALQTVDASGASLVAAQAAVTQARTALENTQAEADRTFQLEERGIVATARGD 152

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK---SSLLRALLSSHQKDLTMM 202
                + S    L      + S                   A L   Q DL   
Sbjct: 153 DARAAVESAQAQLDQAEANLDSARAQLGPEGADNPTIQAATAQLEQAQYDLAST 206


>gi|146300817|ref|YP_001195408.1| RND family efflux transporter MFP subunit [Flavobacterium
           johnsoniae UW101]
 gi|146155235|gb|ABQ06089.1| hypothetical lipoprotein, efflux transporter, RND family, MFP
           subunit [Flavobacterium johnsoniae UW101]
          Length = 404

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 52/173 (30%), Gaps = 9/173 (5%)

Query: 189 RALLSSHQKDLTMMKNLF-EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
              +    +    ++ L+ ++  V         +I  +    L++             E 
Sbjct: 112 EQTIYISSRVAGRIEELYVKETGVPVRKGQPLYKIYSEQLSALQQEYLLATAQAASFTE- 170

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            D+   +  N  K+      Q++    + + K              +P +G +      +
Sbjct: 171 -DKRFAQIKNAAKQKLLLYGQSEAQLNELLKKQKASPYVVYY----APYSGIVAELSI-T 224

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              Y  +   +MK+       ++ A V P     VK G    V    Y D  +
Sbjct: 225 EGQYVAEGGSIMKL-EDYTRLWVEADVYPADAGKVKIGQKVKVIVSGYEDQPQ 276



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 56/142 (39%), Gaps = 4/142 (2%)

Query: 48  GEILNE-DNVVEIKSPFSGIIKKFQVEN-GSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           G ++ + +  + I S  +G I++  V+  G  + +G PL      + + L   ++  +  
Sbjct: 105 GRLVTDPEQTIYISSRVAGRIEELYVKETGVPVRKGQPLYKIYSEQLSAL--QQEYLLAT 162

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +    TE      + N        +   E QL + L K  ++   V+    S +   L 
Sbjct: 163 AQAASFTEDKRFAQIKNAAKQKLLLYGQSEAQLNELLKKQKASPYVVYYAPYSGIVAELS 222

Query: 166 MKLTRMRSIYLNRLDLENKSSL 187
           +   +  +   + + LE+ + L
Sbjct: 223 ITEGQYVAEGGSIMKLEDYTRL 244


>gi|312889408|ref|ZP_07748961.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
 gi|311298103|gb|EFQ75219.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
          Length = 417

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 65/167 (38%), Gaps = 2/167 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P ++++  +G +L    +  + +   G ++K  VE+G+ + +G P+L   + +    + 
Sbjct: 56  GPFQVTIPVNGIVLPITTI-YLDAVEGGRVEKLFVEDGTTMKKGDPILQLSNTDLELSLA 114

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            ++ S+ NL   +   ++A    N    + + A         + + K      +    G+
Sbjct: 115 TQETSVFNLLTQMQISRNAAQQ-NTISKLNQMADVDNAYNEAERVYKLDKHLYEQKAVGM 173

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
               ++      +++   L    L+  S   R  L   ++     +N
Sbjct: 174 QEFKQAQIAYDYQLKRKKLTAQILKQDSVSTRQELEQAKQSFERTQN 220


>gi|303233076|ref|ZP_07319751.1| Tat pathway signal sequence domain protein [Atopobium vaginae
           PB189-T1-4]
 gi|302480851|gb|EFL43936.1| Tat pathway signal sequence domain protein [Atopobium vaginae
           PB189-T1-4]
          Length = 378

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 80/246 (32%), Gaps = 16/246 (6%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
                 +T   +D  +  ++ ++  +D   +  + L  K +  +K  ES +  + D   +
Sbjct: 26  ARIAGADTQQQLDAAQAKLEEVQKQLDDISAQYEALAEKQNQTKKQIESVQATIEDTQEQ 85

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                ++      + + + + +      +  LN L      + L + +    K     + 
Sbjct: 86  IDD-KTEDLQQKKAQLSKRISLAYKGGNAGILNVLFSSTSFAELSSNIYYLDKISEHDRL 144

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           + E     + +L Q++  + +    L +   EQK  L+ + E  DE         KE+  
Sbjct: 145 MIEAINRVKAELTQRKEELEEQKRTLEQLHDEQKKELKSMQEKQDETQQLLNGLSKEVKD 204

Query: 265 DLEQNQRTF---ADEMSKLTILEKTREQKTI---LSPIAGT---------IVYNQSFSSS 309
            L Q        A+E ++            I     P+ GT                +S 
Sbjct: 205 LLAQRDAELKAAAEEKARQEREAAAARAGRITYNRVPVTGTLNLSPGLSAAQQKIIRTSY 264

Query: 310 NYAQQS 315
             A   
Sbjct: 265 GIASPG 270


>gi|253990399|ref|YP_003041755.1| hypothetical protein PAU_02924 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781849|emb|CAQ85012.1| upf0194 membrane protein ybhg precursor [Photorhabdus asymbiotica]
          Length = 330

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 46/352 (13%), Positives = 106/352 (30%), Gaps = 88/352 (25%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G  I     +   +++   +       ++   +   D+ K+ L  +   
Sbjct: 52  GGKLSNLHVDEGDTITANQVIGQLDNMPFIN-------ALNKAKATRDSAKAHLAMMEYG 104

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y                                             R   I   R ++  
Sbjct: 105 Y---------------------------------------------RTEEIAQVRSEVAQ 119

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +  R   +  ++     + L++   +S N+L   +                +   L  
Sbjct: 120 REAAWRFADNFLKRQ----QGLWQSKVISANELEDAK--------------TNRNQALAA 161

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           +    D+ N   A Y KE   ++ + +   A   + +   E   +   + SP  GTI+  
Sbjct: 162 LQAAKDKLNQFQAGYRKE---EIAEAKGQLAQAEAAVAQAELDLQDTHLTSPSPGTILT- 217

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           ++            +  +   +   ++RA ++   +     G    + +      ++K +
Sbjct: 218 RAIEPGTMLSAGNTVFTLS-LTNPVWVRAYISESHLGQATPGRE-ILLYT--DSRKDKPY 273

Query: 364 KAIIEKIDPIIS-----QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
              I  I P         +  +L+T   Y + + +TD   +     LR G P
Sbjct: 274 HGKIGFISPTAEFTPKNVETPDLRTDLVYRLRIIVTDPDDA-----LRQGMP 320


>gi|163858892|ref|YP_001633190.1| putative membrane fusion protein silB precursor [Bordetella petrii
           DSM 12804]
 gi|163262620|emb|CAP44923.1| Putative membrane fusion protein silB precursor [Bordetella petrii]
          Length = 501

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 62/178 (34%), Gaps = 24/178 (13%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFA-------DEMSKLTILEKTREQKTILSPIAGTIVYN 303
           A LEF   ++   R L +  R          D + ++    K +   TI +P  G +   
Sbjct: 170 AQLEFLALMRSGERSLARAARERMRLLGMPDDLIERVERTRKAQPTLTIRAPSTGLLQTL 229

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +          L ++       ++ A V   Q + ++ G  A V FP +        
Sbjct: 230 NVRN-GMAVSAGTVLAQLNGLD-AVWLDAAVPETQARAMRPGLEAKVSFPAFPGHT---- 283

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNT 420
             ++ K+  I+ + D   +T       ++I      + + +LR G  A+V        
Sbjct: 284 --VVGKVSYILPEVDAASRT-----ARIRI---ELQNPDGQLRPGLFAKVEFAHTGEK 331


>gi|152995320|ref|YP_001340155.1| secretion protein HlyD family protein [Marinomonas sp. MWYL1]
 gi|150836244|gb|ABR70220.1| secretion protein HlyD family protein [Marinomonas sp. MWYL1]
          Length = 285

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 65/219 (29%), Gaps = 21/219 (9%)

Query: 211 VSQNDLNQ-QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           V Q        +    +   L      +    R    L  +A          IS ++ + 
Sbjct: 74  VDQKRYQAALNQSKANTENALYSWQLAKHKYERRTALLSQKAISAEDLEASRISTEIAKA 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               A  +++    +   ++  + +P++G I+        NY  Q  P+  IV  S   Y
Sbjct: 134 NYDLA--VAQQEAAQLNFDRTKVYAPVSGHIINLNLR-QGNYVGQGSPVFAIV-QSDSFY 189

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A     +I  +     A +          K     +  I   I+  +     Q   +V
Sbjct: 190 VTAYFEETKIPLIHLNQQAKITL----LSGGKPLTGQVVSIGKAIANTNTQSNGQLLPQV 245

Query: 390 -----------ILKIT-DLAFSDNNIELRNGFPAEVLFT 416
                       + +   L   +   +L  G  A +  T
Sbjct: 246 QQTFNWVRLSQRIPVDIKLDSLNAERQLSAGMTATIHLT 284



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 80/237 (33%), Gaps = 16/237 (6%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            +T+L +I  I    W     +    +  G I  +  +V +    SG + +  + N   +
Sbjct: 8   LLTVLVVIAAIFAGRWVWNDYMHSPWTRDGRIRAD--IVTVAPDVSGWVNELNITNDQAV 65

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSALDFLNNKYDVLEKAF 131
            +G  L + +       ++  K + +N        +   +   + L       + LE + 
Sbjct: 66  KKGDLLFSVDQKRYQAALNQSKANTENALYSWQLAKHKYERRTALLSQKAISAEDLEASR 125

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            S E    ++        +   N+  + VY  +   +  +     N +   +       +
Sbjct: 126 ISTEIAKANYDLAVAQQEAAQLNFDRTKVYAPVSGHIINLNLRQGNYVGQGS------PV 179

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINEL 247
            +  Q D   +   FE+  +    LNQQ +I   S  + L   +      + + N  
Sbjct: 180 FAIVQSDSFYVTAYFEETKIPLIHLNQQAKITLLSGGKPLTGQVVSIGKAIANTNTQ 236


>gi|156740290|ref|YP_001430419.1| RND family efflux transporter MFP subunit [Roseiflexus castenholzii
           DSM 13941]
 gi|156231618|gb|ABU56401.1| efflux transporter, RND family, MFP subunit [Roseiflexus
           castenholzii DSM 13941]
          Length = 587

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/335 (11%), Positives = 92/335 (27%), Gaps = 35/335 (10%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK---YDVLEKAFESREEQLLDFLGKYH 146
           I+    +  +   +++ +      +  L  +              ++ +    D   +  
Sbjct: 219 IDAERQVFERANRLRDAQTAFAAARDNLARVEADGKDPLTGAPLTDAGKRAYADAFAQAE 278

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                       +       +   +  +      +    + L ALL+ +   +   +   
Sbjct: 279 RAMQDAERALNQARIAHETARQNEITGLAEAEARVATAQANLDALLTPNPDRIAAARAAL 338

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            +       L  ++R    +  +      E        +                 + DL
Sbjct: 339 AQAEADLARLLGEQRQGALAAQQANLAAAEANLARLTADPR---------------ATDL 383

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHS 325
            + Q   A   ++L + +   +  T+ +P  G +      +     Q  Q P++ ++   
Sbjct: 384 ARAQARVAQAQAQLDLAQIRLDDTTLKAPFTGVVARITV-APGE--QAGQNPVLTLI-DV 439

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               +   V    +  V  G    V               ++++I P    Q  N +   
Sbjct: 440 SRFNVTVTVDEVDVARVAPGQEVEVLIDALGP---PPLTGVVQRIAP----QATNERNVT 492

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            YEV L++T          +R+G  A         
Sbjct: 493 AYEVELEVT-----PGERPVRSGMTASATIITAKR 522



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/241 (9%), Positives = 60/241 (24%), Gaps = 28/241 (11%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLI------------------------DLKK 100
           G +    V  G  +  G PL+  +  E    I                        ++ +
Sbjct: 84  GRVADILVAEGDLVQAGAPLIRLDSREAEAQIASARAALAQAEADLRQLQEGATPEEIAQ 143

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS----TCSKVFNYG 156
              +         ++A    N          E    +L    G  ++             
Sbjct: 144 AQAQVESARGALAQTAGSVTNADIAAARARVEEARARLSALQGAPNNDELTAARAALTEA 203

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +++ R      T          +  N+    +   ++ + +L  ++   +         
Sbjct: 204 QAALDRQRSALATAKIDAERQVFERANRLRDAQTAFAAARDNLARVEADGKDPLTGAPLT 263

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           +  +R    +  +    + + +  L      ++ A       L E    +   Q      
Sbjct: 264 DAGKRAYADAFAQAERAMQDAERALNQARIAHETARQNEITGLAEAEARVATAQANLDAL 323

Query: 277 M 277
           +
Sbjct: 324 L 324


>gi|52841262|ref|YP_095061.1| chemiosmotic efflux system C protein B [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|19880994|gb|AAM00621.1| chemiosmotic efflux system C protein B [Legionella pneumophila]
 gi|52628373|gb|AAU27114.1| chemiosmotic efflux system C protein B [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
          Length = 322

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 39/118 (33%), Gaps = 16/118 (13%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +PIAG I   ++ +     + +  L  I  +     + A+V  + +  +K G    V 
Sbjct: 128 VTAPIAGII-DARNINLGQAVEPNTVLFHIS-NRDKLLVIAQVYEEDLDKIKVGQEVNVH 185

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              Y           +  I+P +      +       V + + +         L+ G 
Sbjct: 186 ALSYPKRTFP---GQVTLIEPNLDPLTRTVN------VRITLDNEEKL-----LKPGM 229


>gi|296314914|ref|ZP_06864855.1| SMC family protein [Neisseria polysaccharea ATCC 43768]
 gi|296838099|gb|EFH22037.1| SMC family protein [Neisseria polysaccharea ATCC 43768]
          Length = 1161

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSL--AAADKATAQHQSLQARQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++     I ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQ-----IQALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|258541292|ref|YP_003186725.1| multidrug ABC transporter [Acetobacter pasteurianus IFO 3283-01]
 gi|329114898|ref|ZP_08243654.1| Putative protein YdhJ [Acetobacter pomorum DM001]
 gi|256632370|dbj|BAH98345.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256635427|dbj|BAI01396.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256638482|dbj|BAI04444.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256641536|dbj|BAI07491.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256644591|dbj|BAI10539.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256647646|dbj|BAI13587.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256650699|dbj|BAI16633.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256653690|dbj|BAI19617.1| multidrug resistance transporter HlyD/EmrA/FusE [Acetobacter
           pasteurianus IFO 3283-12]
 gi|326695795|gb|EGE47480.1| Putative protein YdhJ [Acetobacter pomorum DM001]
          Length = 303

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 63/218 (28%), Gaps = 24/218 (11%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           +    + ++   L   + + K              +  A   +  + ++     +     
Sbjct: 81  RFRLAIREAQARLDGALEDLKLKRNDARRRMGLGGIVSAEEQEVFNSNVATQIASVDAAR 140

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + L + +   ++  + SP+ G I         +YA   Q  M ++  S   ++       
Sbjct: 141 AALDVAKLNLQRSVLYSPVNGYITNLNLR-VGDYASAGQARMAVI-DSDSYWVYGYFEET 198

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT-------------- 383
           ++  V  G  A V+   Y           +  I   I+  +                   
Sbjct: 199 KMWGVHVGDEARVKLMGYK----PILTGHVVSIARGINDTNGTPDKLGLQDVNPIFTWVR 254

Query: 384 -QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             +   V + I  +    +++ L  G  A V    +  
Sbjct: 255 LAQRIPVRIHIDHV---PDSVTLAAGMTATVSVGPEPR 289



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 16/162 (9%), Positives = 50/162 (30%), Gaps = 14/162 (8%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVVEIKSP 62
            L R     +  + ++S+  ++G+  W     +            G +     VV++   
Sbjct: 2   PLLRTLIRVVLTLAVVSLAIVLGITLWNVYMIAPWTR-------DGRVRV--YVVDVAPE 52

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG + +  + +   + +G PL   + +     I   +  +      +  +++       
Sbjct: 53  VSGTVVQIPIVDNQFVHKGDPLFVLDPVRFRLAIREAQARLDGALEDLKLKRNDARRRMG 112

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
              ++    +      +              +    ++ RS+
Sbjct: 113 LGGIVSAEEQEVFNSNVATQIASVDAARAALDVAKLNLQRSV 154


>gi|238759485|ref|ZP_04620648.1| Secretion protein HlyD family protein [Yersinia aldovae ATCC 35236]
 gi|238702260|gb|EEP94814.1| Secretion protein HlyD family protein [Yersinia aldovae ATCC 35236]
          Length = 327

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 65/401 (16%), Positives = 126/401 (31%), Gaps = 96/401 (23%)

Query: 20  MTLLSIIGIIGLITWSILLPI-EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
           + +  +   I ++  S+L       V   GE+  +   V I S   G +    VE G  +
Sbjct: 8   IVVCVLFFFIAVVAISLLFRAYSSEVWLQGEV--DAPEVIISSKAKGRVIDRFVERGDDV 65

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
           ++G  L++ +  E           +K      D  KS L                     
Sbjct: 66  VEGQRLISLDSPELVA-------QLKKYEALRDQAKSNL--------------------- 97

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                                   ++    TR   I   +  L   +   +    ++Q+ 
Sbjct: 98  ------------------------AMSQNGTREEKIRYAKAQLLEATQNFKNSEQTYQR- 132

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +  L ++N VS+++L++  R       +L+     Q  +    N    E    F   
Sbjct: 133 ---LNKLLQRNYVSKDELDESFRSQESDRQKLKS---AQSLLDEASNGDRIEQRQAFEAI 186

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L+   ++L +      D +              + SPI G +    +    +      PL
Sbjct: 187 LRASEQELNEASIIVNDLL--------------VTSPINGEVGTMPA-EKGDLLNALSPL 231

Query: 319 MKIVPHSKLTYI-RAKVTPKQI-QHVKKGYTATVRFPHYADIREKKFKAIIEKIDP--II 374
           + ++   +  ++   +   + I   + KG   T+R P   D   K   A I+ I P    
Sbjct: 232 LVLINLDQSYFVFDIR---EDILSGLHKGDNVTLRVPALND---KLVPATIKYIAPLGDF 285

Query: 375 SQQDNNLQTQEY----YEVILKITDLAFSDNNIELRNGFPA 411
           S +     T ++    +E+ L   +         LR G   
Sbjct: 286 STKRATRATGDFDLKTFEIRLYPLEPIEG-----LRPGMSV 321


>gi|237799352|ref|ZP_04587813.1| HlyD family secretion protein [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|237806266|ref|ZP_04592970.1| HlyD family secretion protein [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331022208|gb|EGI02265.1| HlyD family secretion protein [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331027380|gb|EGI07435.1| HlyD family secretion protein [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 294

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 68/216 (31%), Gaps = 19/216 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q+      R    +  E +E   + +   +         NL     L+E      +  
Sbjct: 78  IDQDRFRLSLRQAQATVAERQETWEQARRENKR---NRGLGNLVAREQLEESQSREARAL 134

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +    +   +   ++  I SP+ G  + +++     +    +P++ +V  S   +I
Sbjct: 135 SALGEARVAVDAAQLNLDRSVIRSPVDGY-LNDRAPREHEFVSAGRPVLSVV-DSASFHI 192

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQDN 379
                  ++  +  G    +R             +I+  I+           P ++   +
Sbjct: 193 DGYFEETKLDGIHVGQGVDIRVIGDNARLTGHVVSIVAGIEDRDRSSGSNLLPNVNPAFS 252

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            ++  +   V +   D+     N  +  G  A V  
Sbjct: 253 WVRLAQRIPVRIAFDDV---PANFRMIAGRTATVSI 285



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++V+I    SG+I+K +V +   + +G  L T +       +   + ++   +   +  +
Sbjct: 46  DIVQIAPDVSGLIQKVEVTDNQPVHKGQVLFTIDQDRFRLSLRQAQATVAERQETWEQAR 105

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                     +++ +      EQL +   +     S +    ++     L +  + +RS
Sbjct: 106 RENKRNRGLGNLVAR------EQLEESQSREARALSALGEARVAVDAAQLNLDRSVIRS 158


>gi|284040340|ref|YP_003390270.1| efflux transporter RND family, MFP subunit [Spirosoma linguale DSM
           74]
 gi|283819633|gb|ADB41471.1| efflux transporter, RND family, MFP subunit [Spirosoma linguale DSM
           74]
          Length = 375

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 94/281 (33%), Gaps = 18/281 (6%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            L+ L        +  +  ++  L  L ++   L    ++ E +L     K      +V 
Sbjct: 8   ALVTLLAACSGEKKTDVQGKREELTELKSQQTELTTKIKTLEAELAKLEPKKQEDV-RVK 66

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +  +S V  +       ++     + +++        + + + K+   ++      A+++
Sbjct: 67  DVTVSPVAATTFKHFVELQGTIDAKNNVQVSPKSGGVVTAVYVKEGDQVR---AGQAIAK 123

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            D              LRE++ E K  L  +  +Y E      N          Q +   
Sbjct: 124 ID-----------DQLLRESMAEVKTQLSLVTTVY-EKQAALWNQQIGTEIQYLQAKNNK 171

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                +L  L     Q T+ +PI+G +           A     L+++V +     + AK
Sbjct: 172 ESLERRLATLNAQLGQSTVTAPISGVVDQVMV-KIGQSAAPGMGLVRVV-NLAQLKVVAK 229

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           V+      V KG    + FP        +   +   +DP+ 
Sbjct: 230 VSDTYSGSVHKGDVVLIDFPDLQKSLNSRISFVATTVDPLT 270



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 39/110 (35%), Gaps = 7/110 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-- 104
            G I  ++NV  +     G++    V+ G Q+  G  +   +D    + +   K  +   
Sbjct: 85  QGTIDAKNNVQ-VSPKSGGVVTAVYVKEGDQVRAGQAIAKIDDQLLRESMAEVKTQLSLV 143

Query: 105 ----NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                 +  +  ++   +    +    +++ E R   L   LG+   T  
Sbjct: 144 TTVYEKQAALWNQQIGTEIQYLQAKNNKESLERRLATLNAQLGQSTVTAP 193


>gi|157738613|ref|NP_001099033.1| coiled-coil alpha-helical rod protein 1 isoform 2 [Homo sapiens]
          Length = 835

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 79/204 (38%), Gaps = 5/204 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + L+   ++  R  +D E      L  +     +     E Q L  + +      +   
Sbjct: 553 DVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQ 612

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAVS 212
             ++S+   L++     +        L  + +  + L   +  +K   +   L E+ + +
Sbjct: 613 ESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDT 672

Query: 213 QNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +  LN+  R   K+ + LR+      ++K   + +  L +EA  E    L    ++LE++
Sbjct: 673 ERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERD 732

Query: 270 QRTFADEMSKLTILEKTREQKTIL 293
           +      + +  +L + ++Q+ + 
Sbjct: 733 KNLMLATLQQEGLLSRYKQQRLLT 756



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E ++  L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 138 QALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEA- 196

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+   SQ +L + +R+  +    L +   E  + L    E  
Sbjct: 197 -EGLRAALAGAEVVRKNLEEG--SQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGL 253

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 254 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 296



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 69/218 (31%), Gaps = 10/218 (4%)

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V    ++ +    +      +       +     L      EK+           L
Sbjct: 144 AEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAAL 203

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSV----YRSLKMKLTRMRSIYLNRLDLEN 183
             A   R + L +   +      ++    +SS+      +L    ++   +  +   LE 
Sbjct: 204 AGAEVVR-KNLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLET 262

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +     L+  Q++  +++    K   +Q DL  Q  +V      + E +  +  +   
Sbjct: 263 RRAGEAKELAEAQREAELLRKQLSK---TQEDLEAQVTLVENLRKYVGEQVPSE--VHSQ 317

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             EL  +  LE   +L+E    L          +  LT
Sbjct: 318 TWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLT 355


>gi|293603368|ref|ZP_06685796.1| RND efflux membrane fusion protein [Achromobacter piechaudii ATCC
           43553]
 gi|292818278|gb|EFF77331.1| RND efflux membrane fusion protein [Achromobacter piechaudii ATCC
           43553]
          Length = 361

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 68/188 (36%), Gaps = 23/188 (12%)

Query: 231 RENIHEQKNMLRHINELYDEA-NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           R  + + +  L      Y  A  L+   ++ + +RD  ++  T   + + + + +   ++
Sbjct: 114 RAELAQARANLTLAQSHYRRAVELQGKGFVSQQARD--ESASTLKVQEAAVALAQARLDK 171

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYT 347
            TI +P  G IV  +S S  +Y  Q Q L    P        +  +V    +  V  G  
Sbjct: 172 MTISAPF-GGIVGLRSVSVGDYVNQGQDLA---PLEAIDPLKVDFRVPEMYLSKVGVGQQ 227

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            T+R            + I+  + P++     ++           +     ++ +  LR 
Sbjct: 228 LTLRLDALPGQER---QGIVYAVSPLVDAGGRSI-----------LLRATVANKDAVLRP 273

Query: 408 GFPAEVLF 415
           G  A V  
Sbjct: 274 GMFARVQL 281



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 40/116 (34%), Gaps = 4/116 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+  + + G  + +G  L+  +D      +   + ++   + H          L  K 
Sbjct: 86  GRIQSIEFKEGQPVARGQVLIRLDDSVPRAELAQARANLTLAQSHY----RRAVELQGKG 141

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
            V ++A +     L           +++    IS+ +  +    +     Y+N+  
Sbjct: 142 FVSQQARDESASTLKVQEAAVALAQARLDKMTISAPFGGIVGLRSVSVGDYVNQGQ 197


>gi|303310557|ref|XP_003065290.1| spindle associated family protein [Coccidioides posadasii C735
           delta SOWgp]
 gi|240104952|gb|EER23145.1| spindle associated family protein [Coccidioides posadasii C735
           delta SOWgp]
          Length = 1616

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 77/217 (35%), Gaps = 12/217 (5%)

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD----FLNNKYDVLEKAFESRE 135
            G  +         D    +           DTE+ +L+     L ++   L+   +   
Sbjct: 777 AGDSIFERSASRAQDRSASRASDGTRASRMSDTERESLETKNGELRDQVSTLKLENQGLR 836

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            QL +++ +  +           +      ++L R ++++L     E + + L+ L +  
Sbjct: 837 AQLDEYMSEIETMDRAYQEDMDQAEEEVQTLQLERDQAMHL----AEEREAELQDLKAEA 892

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q+++  +++  +   +  ++  + E  +      LR    E ++    I  L ++A    
Sbjct: 893 QEEINALEDELD---LKTDEGQRMEAELRNQQENLRALQAEMRSANEGILRLEEDAQNNL 949

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
             Y   + ++LE   R        L       ++ T+
Sbjct: 950 QKYKA-VQQELEDANRELEALEKNLFESNSKIQRLTV 985



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 75/222 (33%), Gaps = 16/222 (7%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVS--IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
                 +L  E+    +L   K V   +++    ++  +  L   N+K   L    ES + 
Sbjct: 933  SANEGILRLEEDAQNNLQKYKAVQQELEDANRELEALEKNLFESNSKIQRLTVQLESSQN 992

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            ++     +  +   K+ +         + ++  R ++  L+    E +           Q
Sbjct: 993  EIAFLREEQDADKIKIGDLESDLKTTQINLQSERDQTRELDCRLAEERHQREVVGGKEKQ 1052

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--------------LRENIHEQKNMLR 242
            +   +M  L  +N  +++++ + ++ +    +E              LRE + +      
Sbjct: 1053 EVQRIMNELNRENTGAKDEIRKLKKALSAREIEANTWKERLFELESSLREALGDLNGTRS 1112

Query: 243  HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
             +     +   E  +   E+    E      A   ++  +LE
Sbjct: 1113 SLLLSITKLQKELESTTLELQSARETLDEKEALLRNRDALLE 1154



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 27/246 (10%), Positives = 76/246 (30%), Gaps = 39/246 (15%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD-------------- 118
            ++  +I  G      +  +    +  ++   + L C +  E+   +              
Sbjct: 1001 QDADKIKIGDLESDLKTTQI--NLQSERDQTRELDCRLAEERHQREVVGGKEKQEVQRIM 1058

Query: 119  -FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
              LN +    +      ++ L     + ++   ++F    SS+  +L        S+ L+
Sbjct: 1059 NELNRENTGAKDEIRKLKKALSAREIEANTWKERLFELE-SSLREALGDLNGTRSSLLLS 1117

Query: 178  RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV----------SQNDLNQQERIVYKST 227
               L+ +       L S ++ L   + L                  ++L ++ER  +++ 
Sbjct: 1118 ITKLQKELESTTLELQSARETLDEKEALLRNRDALLESHGLETRKLSELLERERQAHRAD 1177

Query: 228  L-----------ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
                        +    I +    +  +     +    F+   ++    L +    F   
Sbjct: 1178 KHSFEQALKSHHQASRTIAQSNTRISDLEHARGQDRKRFSTLEQQYKDQLNERNAMFLAI 1237

Query: 277  MSKLTI 282
              +L++
Sbjct: 1238 WKRLSV 1243


>gi|209517287|ref|ZP_03266131.1| secretion protein HlyD family protein [Burkholderia sp. H160]
 gi|209502296|gb|EEA02308.1| secretion protein HlyD family protein [Burkholderia sp. H160]
          Length = 351

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 80/238 (33%), Gaps = 9/238 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
               R+         +L  IG+  ++ W     ++ + S+    +  D V  +    SG 
Sbjct: 5   ARAARHLKKLPAAAIVLMAIGLQIVVLW----RLDRAPSTDDAYVYADTVNVV-PEISGR 59

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V +   + QG  LL  +       +D  +  +  L   I   + +++      D 
Sbjct: 60  IIELPVRDNQAVRQGDLLLRIDPRPYQAALDQARARLDTLDHQIVLTQRSVNAQQYNADS 119

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           ++ A E               T   +    +S+    +    T  RS     +   +++ 
Sbjct: 120 MQAAVERARAVANQAADTLRRTEPLLAQGYVSA--EEVDRARTAQRSAQAELIAAMHEAQ 177

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLELRENIHEQKNMLR 242
              A +S     +     +  + A+++ +L   +         + LR  + +  + L+
Sbjct: 178 QASAAVSGVDALVAQRAEVNAQIAIAELNLEFTEVRAPFDGRAVSLRTTVGQFASALK 235



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 89/262 (33%), Gaps = 24/262 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + LL    + +          + ++   + +    + +   N   ++
Sbjct: 62  ELPVRDNQAVRQGDLLLRIDPRPYQAALDQARARLDTLDHQIVLTQRSVNAQQYNADSMQ 121

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA+ +     L   + L  +  VS  ++++       +  EL   +HE +    
Sbjct: 122 AAVERARAVANQAADTLRRTEPLLAQGYVSAEEVDRARTAQRSAQAELIAAMHEAQQASA 181

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A+  +++ I E   E   + +P  G  V 
Sbjct: 182 AVSGVDALVAQR-------------------AEVNAQIAIAELNLEFTEVRAPFDGRAVS 222

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ +   +A   +P+  ++  ++  Y+ A     +++ V     +TV          ++
Sbjct: 223 LRT-TVGQFASALKPVFTLI-DTRHWYVVANFRETELKGVHACTPSTVYLMS---DTARR 277

Query: 363 FKAIIEKIDPIISQQDNNLQTQ 384
           F  +++ +   +   D  +  Q
Sbjct: 278 FTGVVDSVGYGVLPDDGGVVEQ 299


>gi|197284581|ref|YP_002150453.1| macrolide transporter subunit MacA [Proteus mirabilis HI4320]
 gi|194682068|emb|CAR41600.1| macrolide-specific efflux protein [Proteus mirabilis HI4320]
          Length = 369

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 56/177 (31%), Gaps = 8/177 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +   V+++G++     V ++ +  SG ++   V+ G  + +G  L   +  +  + + 
Sbjct: 44  GELSKEVTATGKLDAVRKV-DVGAQVSGQLQTLYVKEGDVVKKGDLLAIIDPKKAQNEVA 102

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES---REEQLLDFLGKYHSTCSKVFN 154
             + +   L  ++   K+ L      Y    K   +    +E+L           ++V  
Sbjct: 103 ESQETNNELMANLQQAKAELRLAQLTYQRQLKLIGTHVIAQEELDRTKTDVEVKKARVAT 162

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRL----DLENKSSLLRALLSSHQKDLTMMKNLFE 207
           Y          +   R    Y         +      L        ++   +  L +
Sbjct: 163 YEAQIRKNQATLDTARTNLQYTRITAPMDGVVTFIKTLEGQTVIAAQEAPTILTLAD 219



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 70/210 (33%), Gaps = 17/210 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI-NELYDEANLEFANYLKEISRDLEQ 268
           A SQ   N+    + ++  ELR      +  L+ I   +  +  L+      E+ +    
Sbjct: 102 AESQETNNELMANLQQAKAELRLAQLTYQRQLKLIGTHVIAQEELDRTKTDVEVKKARVA 161

Query: 269 N-QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHS 325
             +       + L       +   I +P+ G + + ++          +   ++ +    
Sbjct: 162 TYEAQIRKNQATLDTARTNLQYTRITAPMDGVVTFIKTLEGQTVIAAQEAPTILTLA-DL 220

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               ++A+V+   + ++K    A+  F        K F   ++     I      +    
Sbjct: 221 DTMLVKAEVSEADVIYLKPDLKAS--FTVLGAPD-KAFNGKLK----DILPTPEKINDAI 273

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +Y    ++ +     + + L+    A+V  
Sbjct: 274 FYYARFEVPNE---QHLLRLQ--MTAQVKI 298


>gi|146086892|ref|XP_001465676.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134069775|emb|CAM68102.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
          Length = 2064

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 65/211 (30%), Gaps = 14/211 (6%)

Query: 81   GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
            G      ED       +++++  +     +  E    +  + +  + E    +R+ +   
Sbjct: 1168 GEIRGALEDQLEDAAREIRELREQLAVAQVRREALDAELADLREQLREAEERARDVEAQQ 1227

Query: 141  FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                         +  ++ +   L+    R R +   + D + + + LR  L   ++   
Sbjct: 1228 CDR----------DAEVADLREQLREAEERARDVEAQQCDRDAEVADLREQLREAEERTR 1277

Query: 201  MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             ++           DL +Q R   +   ++     ++   L  + E   EA        +
Sbjct: 1278 DVEAQQCDRDAELADLREQLREAEERARDVEAQQCDRDAELADLREQLREAE----ERTR 1333

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++           AD   +L   E+      
Sbjct: 1334 DVEAQQCDRDAEVADLREQLREAEERARDVE 1364



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/225 (11%), Positives = 63/225 (28%), Gaps = 14/225 (6%)

Query: 81   GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQL 138
            G      ED       +++++  +     +  E    +  + +  + E    +R  E Q 
Sbjct: 1644 GEIRGALEDQLEDAAREIRELREQLAVAQVRREALDAELADLREQLREAEERARDVEAQQ 1703

Query: 139  LDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             D   +      ++         V      +   +  +     + E ++  + A      
Sbjct: 1704 CDRDAEVADLREQLREAEERTRDVEAQQCDRDAELADLREQLREAEERTRDVEAQQCDRD 1763

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY-------- 248
             ++  ++    +      D+  Q+        +LRE + E +   R +            
Sbjct: 1764 AEVADLREQLREAEERARDVEAQQCDRDAEVADLREQLREAEERARDVEAQQCDRDAEVA 1823

Query: 249  --DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E   E     +++           AD   +L   E+      
Sbjct: 1824 DLREQLREAEERTRDVEAQQCDRDAELADLREQLREAEERTRDVE 1868



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 26/227 (11%)

Query: 91   ETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREE-QLLDFLGKYHST 148
            +       +   + +LR  + + E+ A D    + D   +  + RE+ +  +   +    
Sbjct: 1530 DVEAQQCDRDAEVADLREQLREAEERARDVEAQQCDRDAEVADLREQLREAEERARDVEA 1589

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT-------- 200
                 +  ++ +   L+    R R +   + D + +   ++ LLSS  ++          
Sbjct: 1590 QQCDRDAEVADLREQLREAEERARDVEAQQCDRDAELERVKELLSSSMREAECSGEIRGA 1649

Query: 201  ----------MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI------ 244
                       ++ L E+ AV+Q      +  +     +LRE     +++          
Sbjct: 1650 LEDQLEDAAREIRELREQLAVAQVRREALDAELADLREQLREAEERARDVEAQQCDRDAE 1709

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E   E     +++           AD   +L   E+      
Sbjct: 1710 VADLREQLREAEERTRDVEAQQCDRDAELADLREQLREAEERTRDVE 1756



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 61/203 (30%), Gaps = 9/203 (4%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             D    ++      I   +  L     +   +E     R+ ++ D   +      +    
Sbjct: 1080 ADAALATLAKRDTEIADLREQLREAEERARDVEAQQCDRDAEVADLREQLREAEERT--R 1137

Query: 156  GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKNLFEKNAVSQN 214
             + +       +L R++ +  + +     S  +R  L    +D    ++ L E+ AV+Q 
Sbjct: 1138 DVEAQQYDRDAELERVKELLSSSMREAECSGEIRGALEDQLEDAAREIRELREQLAVAQV 1197

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHI------NELYDEANLEFANYLKEISRDLEQ 268
                 +  +     +LRE     +++               E   E     +++      
Sbjct: 1198 RREALDAELADLREQLREAEERARDVEAQQCDRDAEVADLREQLREAEERARDVEAQQCD 1257

Query: 269  NQRTFADEMSKLTILEKTREQKT 291
                 AD   +L   E+      
Sbjct: 1258 RDAEVADLREQLREAEERTRDVE 1280



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 65/201 (32%), Gaps = 5/201 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREE-QLLDFLGKYHST 148
            +       +   + +LR  + + E+ A D    + D   +  + RE+ +  +   +    
Sbjct: 1502 DVEAQQCDRDAEVADLREQLREAEERARDVEAQQCDRDAEVADLREQLREAEERARDVEA 1561

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK---DLTMMKNL 205
                 +  ++ +   L+    R R +   + D + + + LR  L   ++   D+   +  
Sbjct: 1562 QQCDRDAEVADLREQLREAEERARDVEAQQCDRDAEVADLREQLREAEERARDVEAQQCD 1621

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +       +L        + + E+R  + +Q            E         + +  +
Sbjct: 1622 RDAELERVKELLSSSMREAECSGEIRGALEDQLEDAAREIRELREQLAVAQVRREALDAE 1681

Query: 266  LEQNQRTFADEMSKLTILEKT 286
            L   +    +   +   +E  
Sbjct: 1682 LADLREQLREAEERARDVEAQ 1702


>gi|146093025|ref|XP_001466624.1| kinesin [Leishmania infantum]
 gi|134070987|emb|CAM69664.1| putative kinesin [Leishmania infantum JPCM5]
          Length = 1665

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/224 (12%), Positives = 64/224 (28%), Gaps = 18/224 (8%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFL 142
             ED        ++ +  +  R     EK   +                +  EEQ +   
Sbjct: 459 ELEDQREAYEAQMQALEAEAERARAQQEKREEELRRAHEMATKYARDRLKEMEEQCVSAE 518

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLT---RMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               S   ++     +   +    + +   R+  +   + D+EN       L S H++++
Sbjct: 519 AALRSREEELVKKQRAIEEKMRAAEASSRCRIDELQRQQKDMENALKEKERLTSMHEREM 578

Query: 200 TMMKNLFEKNAVS------------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                  E+N  +               +   E    +   ++ + I E +         
Sbjct: 579 RHKYKQAEENLRAMEKRNFQMEEEWAAKVRALEATAKQREEDVAQRIREAQGAQCKAEAA 638

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E      ++  +  Q Q   A + ++L    +   + T
Sbjct: 639 VRRKEEELQRRWIQVDNEARQLQSEVAAKEAELKRRVQEANRST 682



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 64/195 (32%), Gaps = 2/195 (1%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
               +   ++    K + +NLR          +    K   LE   + REE +   + + 
Sbjct: 569 RLTSMHEREMRHKYKQAEENLRAMEKRNFQMEEEWAAKVRALEATAKQREEDVAQRIREA 628

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN- 204
                K             +  +         + ++  K + L+  +    +     +  
Sbjct: 629 QGAQCKAEAAVRRKEEELQRRWIQVDNEARQLQSEVAAKEAELKRRVQEANRSTEQREED 688

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E+   ++ +L+++ER   +  LE+ E + +   +        +    E  N   E   
Sbjct: 689 LNERLRKAEYELSRRERETAQKLLEV-EALQQATELQSETTRAKERTMKEAHNVRTESLE 747

Query: 265 DLEQNQRTFADEMSK 279
            LE   +   +E+ K
Sbjct: 748 ALEAQLQQRQEELRK 762



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 72/205 (35%), Gaps = 2/205 (0%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +  K+  ++     +D E   L       +   K       +  +   +  +   
Sbjct: 634 KAEAAVRRKEEELQRRWIQVDNEARQLQSEVAAKEAELKRRVQEANRSTEQREEDLNERL 693

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYL-NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +   Y +S   R    KL  + ++     L  E   +  R +  +H      ++ L  + 
Sbjct: 694 RKAEYELSRRERETAQKLLEVEALQQATELQSETTRAKERTMKEAHNVRTESLEALEAQL 753

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              Q +L +Q   V +          EQ+  L+  +E   +A  ++   + +   +L + 
Sbjct: 754 QQRQEELRKQFDEVMQMKRAWNAQHAEQRQKLQAEHEAALQAVKQWETDVSQREMELRRQ 813

Query: 270 QRTFADEMSKLTILEKTREQKTILS 294
               A ++ +   ++  ++Q  +L+
Sbjct: 814 NDELAGKL-RAQEMQLEKQQMMLLA 837



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 75/208 (36%), Gaps = 11/208 (5%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            L++L+++  + +R + + E+  ++   +      +   + ++     L +     S +  
Sbjct: 1298 LLELEEMDQRKMREYAEREQRLVEMAEHLKMRQARINTNAQDLFQSLLQRSAEQQSALAE 1357

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-- 212
                    SL+      R   L        +  ++ L+  H++ +   K+  ++ A    
Sbjct: 1358 AHEELERVSLQRTKYMARERQLIEQARHGNADAMQQLVKLHEEYVESEKHQLKRRARRLE 1417

Query: 213  ------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISR 264
                  +  L +QE  +++  L++      +  +     EL  +A      A + +   R
Sbjct: 1418 EEEAHNKQRLAEQEAEIHRYLLDIEAEDVRRNALSHQGQELMRKAEERLSKAQFKEAALR 1477

Query: 265  DL-EQNQRTFADEMSKLTILEKTREQKT 291
            DL  Q      +   +   +E T  +K 
Sbjct: 1478 DLARQIHLEAMESEEQARAMETTLRRKE 1505



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 15/186 (8%)

Query: 99   KKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +V     R  + D E   L  L ++ DVL     +R E  L    +        F    
Sbjct: 1226 TRVKDDAARQRLTDEEAQRLRNLQHEGDVL-----ARREDCLAAERERVEQRVLDFESYQ 1280

Query: 158  SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
             +    L  +   ++   L   +++ +   +R      Q+ + M ++L       +    
Sbjct: 1281 RAQMTELSRQEQEVKGYLLELEEMDQRK--MREYAEREQRLVEMAEHL-------KMRQA 1331

Query: 218  QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            +           L +   EQ++ L   +E  +  +L+   Y+    + +EQ +   AD M
Sbjct: 1332 RINTNAQDLFQSLLQRSAEQQSALAEAHEELERVSLQRTKYMARERQLIEQARHGNADAM 1391

Query: 278  SKLTIL 283
             +L  L
Sbjct: 1392 QQLVKL 1397


>gi|117165350|emb|CAL64808.1| putative secretion protein [Pseudomonas extremaustralis]
          Length = 360

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 62/168 (36%), Gaps = 8/168 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN--- 121
           G + +  V+ G  +  G  L   +    T  +   +  ++ +R   +  ++A   ++   
Sbjct: 58  GRLLQIDVDEGDFVAAGQVLAQMDIQVLTAQLSQAQAQVRQVRQAQNATRTAHSQVSLRI 117

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++    E     R+ +L     +Y  T + V    +    + L   L  ++S        
Sbjct: 118 SEKATAEAVVHQRQAELTAAQKRYARTETLVRRNALPQ--QKLDDDLAALQSSQAALSAA 175

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            ++    +A + + Q  +   ++  E    +Q  + + +  +  S L+
Sbjct: 176 RSQVLSSQAAIDAAQSQVIEAESSVE---AAQASVERLQADIEDSRLK 220


>gi|81244859|gb|ABB65567.1| putative membrane protein [Shigella boydii Sb227]
          Length = 464

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I+   N V ++S   G +     + G Q+  G  L   +  
Sbjct: 113 AATA-VEQAVPRYLTGLGTIIAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 170

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 171 QFKVALAQTQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 226

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 227 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 259



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 171 QFKVALAQTQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 230

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 231 DEASVASAQLQLD 243


>gi|32476727|ref|NP_869721.1| membrane fusion protein mtrC [Rhodopirellula baltica SH 1]
 gi|32447273|emb|CAD77099.1| probable membrane fusion protein mtrC [Rhodopirellula baltica SH 1]
          Length = 600

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 77/239 (32%), Gaps = 30/239 (12%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMK 203
                 + +   + S    L++      SI +   + L  +    RA LS  + + + ++
Sbjct: 106 LAQIEPERYEIAVESAVADLEVAKLNKESIEIRLKESLPAEMESARANLSLAEMEFSRIE 165

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           NL ++NA S+++ +Q   +V      L   +  +                      K+  
Sbjct: 166 NLKQQNAASKSEYDQARNLVQTRLASLSGLLATE----------------------KQTR 203

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            +L+  +         L   E+  E  T+     G I         +      P++ +  
Sbjct: 204 AELKSAESQIRRAEQTLRDAERDLEHTTLYGSYQGQISGVNVV-PGSVVNAGDPVLTLQ- 261

Query: 324 HSKLTYIRAKVTPKQIQHVKK--GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
            +    +  +++ KQ + +++      T       D  ++   A +  +D         
Sbjct: 262 MTNPIKVEVELSAKQSRSMRRRHQLPTT---YALPDGTQRNTNAFVYNVDASADPDTRT 317


>gi|121612494|ref|YP_001000308.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|167005257|ref|ZP_02271015.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|87250010|gb|EAQ72968.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni 81-176]
          Length = 390

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  ++ + G++  +D V ++ +  SG I K  V+ G+ + QG  +   +  +  + +D+ 
Sbjct: 42  ISQTIEAVGKVYAKDQV-DVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDIT 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +++ + +++++K AL+  + +Y   +K + ++   L +   + ++  +      ++ 
Sbjct: 101 KAQLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYT--LKANVAE 158

Query: 160 VYRSLKMKLTRMRSIY 175
           +   +      +++  
Sbjct: 159 LNAQVVQLEITLKNAQ 174



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 6/167 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q +  +      K  LE+    ++++  L        E      N    +  ++ +   
Sbjct: 102 AQLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELNA 161

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHSKLTY 329
                   L   +K     TI +P+ G ++             +Q    IV   +     
Sbjct: 162 QVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVD-EGQTVNANQNTPTIVRIANLDEME 220

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           +R ++    +  +K G    + F    D  +K + A I  IDP  ++
Sbjct: 221 VRMEIAEADVSKIKVG--TELDFSLLND-PQKTYHAKIASIDPADTE 264


>gi|86151706|ref|ZP_01069920.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|315124124|ref|YP_004066128.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85841335|gb|EAQ58583.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|315017846|gb|ADT65939.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 390

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  ++ + G++  +D V ++ +  SG I K  V+ G+ + QG  +   +  +  + +D+ 
Sbjct: 42  ISQTIEAVGKVYAKDQV-DVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDIT 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +++ + +++++K AL+  + +Y   +K + ++   L +   + ++  +      ++ 
Sbjct: 101 KAQLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYT--LKANVAE 158

Query: 160 VYRSLKMKLTRMRSIY 175
           +   +      +++  
Sbjct: 159 LNAQVVQLEITLKNAQ 174



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 6/167 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q +  +      K  LE+    ++++  L        E      N    +  ++ +   
Sbjct: 102 AQLESAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELNA 161

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHSKLTY 329
                   L   +K     TI +P+ G ++             +Q    IV   +     
Sbjct: 162 QVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVD-EGQTVNANQNTPTIVRIANLDEME 220

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           +R ++    +  +K G    + F    D  +K + A I  IDP  ++
Sbjct: 221 VRMEIAEADVSKIKVG--TELDFSLLND-PQKTYHAKIASIDPADTE 264


>gi|333008810|gb|EGK28270.1| macrolide-specific efflux protein macA domain protein [Shigella
           flexneri K-272]
 gi|333020117|gb|EGK39387.1| macrolide-specific efflux protein macA domain protein [Shigella
           flexneri K-227]
          Length = 263

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 3   LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRN 62

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 63  QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 121

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 122 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 174

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 175 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 213


>gi|262403193|ref|ZP_06079753.1| multidrug resistance efflux pump [Vibrio sp. RC586]
 gi|262350692|gb|EEY99825.1| multidrug resistance efflux pump [Vibrio sp. RC586]
          Length = 376

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 72/233 (30%), Gaps = 25/233 (10%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   ++ +   +K        +     + +       A     Q++    K  +++ A +
Sbjct: 99  FEAEVARLSAKVKEASQGALGLESTLKESQAAVLKAVAERDKAQREFDRYKRGYDRGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  ++   +    +   L   + + K     I                 +  ++     T
Sbjct: 159 EQQMDTTRQAYKAAQAALE--VAQSKQEQAQIA----------------LDSEVGGENTT 200

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS--NYAQQSQPLMKIVPHSKLTYI 330
            A  +++L   E   EQ  + +P  G +           +      P+M  V   +  Y 
Sbjct: 201 VAQLLAELRKAEFDLEQTVVRAPTDGYVTQLALR-PGMMSVPLPLAPVMTFVHTEEKIYT 259

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            A      +Q ++ G+ A   F        K FK  + ++ P I +     + 
Sbjct: 260 AA-FRQNSLQRLQPGFEAEFMFRALP---GKVFKGEVIEVLPAIGESQFQARG 308



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 45/147 (30%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G +    V+    + QG  L   + +     +      +K        L   +   ++A+
Sbjct: 72  GRVIDVPVKANQPLTQGDVLFRIDPVPFEAEVARLSAKVKEASQGALGLESTLKESQAAV 131

Query: 118 DFLNNKYDVLEKAFE--SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                + D  ++ F+   R      F  +   T  + +    +++  +   +     ++ 
Sbjct: 132 LKAVAERDKAQREFDRYKRGYDRGAFTEQQMDTTRQAYKAAQAALEVAQSKQEQAQIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                     + L A L   + DL   
Sbjct: 192 SEVGGENTTVAQLLAELRKAEFDLEQT 218


>gi|261378219|ref|ZP_05982792.1| SMC family protein [Neisseria cinerea ATCC 14685]
 gi|269145294|gb|EEZ71712.1| SMC family protein [Neisseria cinerea ATCC 14685]
          Length = 1161

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIYQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|170765466|ref|ZP_02900277.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia
           albertii TW07627]
 gi|170124612|gb|EDS93543.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia
           albertii TW07627]
          Length = 310

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 63/188 (33%), Gaps = 22/188 (11%)

Query: 204 NLFEKNAVS--------QNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLE 254
            L +K  V         Q  L + +  V    +  +E   E     R  I  +  E   +
Sbjct: 67  QLVKKGQVLFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGIQAMSREEIDQ 126

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N L+ +   L + Q T         + +   E+  I +P  G +     ++   +  +
Sbjct: 127 ANNVLQTVLHQLAKAQATR-------DLAKLDLERTVIRAPADGWVTNLNVYT-GEFITR 178

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               + +V  +   Y+ A +   +++ V  GY A +          K  K  ++ +   +
Sbjct: 179 GSTAVALVKQNS-FYVLAYMEETKLEGVHPGYRAEIT----PLGSNKVLKGTVDSVAAGV 233

Query: 375 SQQDNNLQ 382
           +   +   
Sbjct: 234 TNASSTRD 241



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 48/154 (31%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    +   + L+ +  I     W            + +     +VV I    SG+
Sbjct: 2   KTLIRKFSRTTITVVLVILAFIAIFRAWVYYTE----SPWTRDARFSADVVAIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V +   + +G  L T +       ++  +  +   +  +  EK       N+  +
Sbjct: 58  ITQVNVHDNQLVKKGQVLFTIDQPRYQKALEEAQADVAYYQV-LAQEKRQEAGRRNRLGI 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVLHQLAKAQATRDLAKL 150


>gi|149701424|ref|XP_001491086.1| PREDICTED: similar to early endosome antigen 1 [Equus caballus]
          Length = 1116

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 77/224 (34%), Gaps = 13/224 (5%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G      + L+ FE+     + +   ++  + R         L  L+ +   L+    
Sbjct: 181 HEGVLQEIRSILVDFEETSGKKVYEHDSMATLHFRSLGTAISKILRELDTEISYLKGRIF 240

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             E+QL     +  S    +       + + +      +  +        ++++ +++ L
Sbjct: 241 PVEDQLEALKSESQSKIELLLQQHQDRIEQLINEHEIEVTGLTEKASSARSQANSIQSQL 300

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-------NIHEQKNMLRHIN 245
              Q+      +++ +       L++ E  V +   ELRE        I E +  L   N
Sbjct: 301 EIIQEQARNQNSMYMR------QLSELESTVSQLRSELREAKRMYEDKIEELEKQLVLAN 354

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               EA  E   + +E     +Q Q+  AD   +   L   +EQ
Sbjct: 355 SELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQ 398


>gi|27365041|ref|NP_760569.1| membrane-fusion protein [Vibrio vulnificus CMCP6]
 gi|27361187|gb|AAO10096.1| Membrane-fusion protein [Vibrio vulnificus CMCP6]
          Length = 364

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 86/254 (33%), Gaps = 25/254 (9%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLE 229
           +       +DL  +++  R      +    +++   EK  AV +  +     I+ K  L+
Sbjct: 59  LAQPTARSIDLYGRTAPNRQARLGAEIAGKIVRLEVEKGQAVRKGQVIA---IIDKRDLD 115

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            R    ++   +  +     +A     +   +        +    D  + L+ +E     
Sbjct: 116 YR---LQRAKAMLEVKLKEFKAAQSLKSRGLQGEVAFATAEAALVDAKANLSNVETELSN 172

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P  G I+ ++     ++     P+  ++   +   I A V+ + +QH+     A 
Sbjct: 173 TEVRAPFDG-ILDSRFVEVGDFVGIGDPVATVI-DLQKLVIEADVSERHVQHLAAKQMAQ 230

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           VR      I  +  +  I  +  + S   N               ++   ++   +  G 
Sbjct: 231 VRL-----IGGQLLQGAIRYVGQVSSPSTNTF-----------PIEIEVDNSQHRIPAGV 274

Query: 410 PAEVLFTAKNTTLA 423
            AEV  T   T+  
Sbjct: 275 SAEVQLTLDQTSAI 288



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 55/153 (35%), Gaps = 5/153 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I + +VE G  + +G  +   +       +D +    K +      E  A   L ++ 
Sbjct: 87  GKIVRLEVEKGQAVRKGQVIAIID----KRDLDYRLQRAKAMLEVKLKEFKAAQSLKSRG 142

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E AF + E  L+D      +  +++ N  + + +  +          ++   D    
Sbjct: 143 LQGEVAFATAEAALVDAKANLSNVETELSNTEVRAPFDGILDSRFVEVGDFVGIGDPVAT 202

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
              L+ L+         +++L  K  ++Q  L 
Sbjct: 203 VIDLQKLVIEADVSERHVQHLAAKQ-MAQVRLI 234


>gi|30062366|ref|NP_836537.1| macrolide transporter subunit MacA [Shigella flexneri 2a str.
           2457T]
 gi|38703901|ref|NP_308991.2| macrolide transporter subunit MacA [Escherichia coli O157:H7 str.
           Sakai]
 gi|56479754|ref|NP_706764.2| macrolide transporter subunit MacA [Shigella flexneri 2a str. 301]
 gi|161367628|ref|NP_286650.2| macrolide transporter subunit MacA [Escherichia coli O157:H7
           EDL933]
 gi|168752459|ref|ZP_02777481.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4113]
 gi|168758794|ref|ZP_02783801.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4401]
 gi|168769855|ref|ZP_02794862.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4486]
 gi|168783789|ref|ZP_02808796.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4076]
 gi|168789130|ref|ZP_02814137.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC869]
 gi|208806203|ref|ZP_03248540.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4206]
 gi|208815637|ref|ZP_03256816.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4045]
 gi|208822209|ref|ZP_03262528.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4042]
 gi|209396080|ref|YP_002269552.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4115]
 gi|254792079|ref|YP_003076916.1| macrolide transporter subunit MacA [Escherichia coli O157:H7 str.
           TW14359]
 gi|261225534|ref|ZP_05939815.1| macrolide-specific efflux protein [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261258497|ref|ZP_05951030.1| macrolide-specific efflux protein [Escherichia coli O157:H7 str.
           FRIK966]
 gi|291281882|ref|YP_003498700.1| macrolide transporter subunit MacA [Escherichia coli O55:H7 str.
           CB9615]
 gi|54037773|sp|P64177|MACA_SHIFL RecName: Full=Macrolide-specific efflux protein macA; Flags:
           Precursor
 gi|54041278|sp|P64176|MACA_ECO57 RecName: Full=Macrolide-specific efflux protein macA; Flags:
           Precursor
 gi|30040611|gb|AAP16343.1| putative membrane protein [Shigella flexneri 2a str. 2457T]
 gi|56383305|gb|AAN42471.2| putative membrane protein [Shigella flexneri 2a str. 301]
 gi|188013697|gb|EDU51819.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4113]
 gi|188998907|gb|EDU67893.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4076]
 gi|189354439|gb|EDU72858.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4401]
 gi|189361163|gb|EDU79582.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4486]
 gi|189371149|gb|EDU89565.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC869]
 gi|208726004|gb|EDZ75605.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4206]
 gi|208732285|gb|EDZ80973.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4045]
 gi|208737694|gb|EDZ85377.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4042]
 gi|209157480|gb|ACI34913.1| macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC4115]
 gi|254591479|gb|ACT70840.1| macrolide-specific efflux protein [Escherichia coli O157:H7 str.
           TW14359]
 gi|281600207|gb|ADA73191.1| Macrolide-specific efflux protein macA [Shigella flexneri 2002017]
 gi|290761755|gb|ADD55716.1| macrolide transporter subunit MacA [Escherichia coli O55:H7 str.
           CB9615]
 gi|313650209|gb|EFS14621.1| macrolide-specific efflux protein macA [Shigella flexneri 2a str.
           2457T]
 gi|320192636|gb|EFW67277.1| Macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. EC1212]
 gi|320637749|gb|EFX07541.1| macrolide transporter subunit MacA [Escherichia coli O157:H7 str.
           G5101]
 gi|320642872|gb|EFX12073.1| macrolide transporter subunit MacA [Escherichia coli O157:H- str.
           493-89]
 gi|320648329|gb|EFX16984.1| macrolide transporter subunit MacA [Escherichia coli O157:H- str. H
           2687]
 gi|320659791|gb|EFX27347.1| macrolide transporter subunit MacA [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320664261|gb|EFX31412.1| macrolide transporter subunit MacA [Escherichia coli O157:H7 str.
           LSU-61]
          Length = 371

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++   L D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|74025020|ref|XP_829076.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70834462|gb|EAN79964.1| hypothetical protein, conserved [Trypanosoma brucei]
          Length = 865

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 66/201 (32%), Gaps = 4/201 (1%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                ++++      +R  ++ +K   +    K +V     ++ +E+      +      
Sbjct: 493 RRKRQVNIEVAKSAMIRDALEKQKRLFECAERKLEVEANRAKNLQERERLIELRNERLQE 552

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +           L  +      I L +     +    +  L   Q+ L   +    +  
Sbjct: 553 MMMEKVRRKREEDLIAQQNAAARIKLQQERNAEREKEYQREL---QERLERAEERTARQQ 609

Query: 211 VSQNDLNQQERIVYKSTLELRE-NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +++ L +Q RI  K   E R+  I     M    +E+      E    ++ +  + E+ 
Sbjct: 610 AARDHLLEQRRIRRKKNAEERQARIERMAEMQEQQSEILRRKYEERDAKVQLVQEERERK 669

Query: 270 QRTFADEMSKLTILEKTREQK 290
           QR   + ++      +   ++
Sbjct: 670 QREAQELLAARAAKSQELREQ 690


>gi|332996273|gb|EGK15900.1| hlyD family secretion family protein [Shigella flexneri VA-6]
          Length = 355

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKTAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|308162170|gb|EFO64579.1| Coiled-coil protein [Giardia lamblia P15]
          Length = 2276

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 72/196 (36%), Gaps = 3/196 (1%)

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +  LR  I   +SA+D  + +   LE   + + + +++  G+  S   +      +S  
Sbjct: 516 EVDALRKDIAALQSAIDDKDKEVKRLEDEIQQKNDTMIELRGRTESEI-ESLQETAASKD 574

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           + +      ++S       L+N  +      S  Q++   +    ++      +LN+  R
Sbjct: 575 QEIAKLEAELKSTLQMIEALKNSEADRSDATSILQREKAYLAEKLQEKENIVAELNEALR 634

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               +  EL E+   Q+   +   + Y+    E    + ++   L   Q T A       
Sbjct: 635 KKDLTIAELHESAAAQQRKEQETIDFYENLKREQNQVISDLRSSLSAKQATLAMAEETAK 694

Query: 282 ILEKTREQKTILSPIA 297
            LE   +  ++ S + 
Sbjct: 695 TLESEVQ--SLKSEVD 708


>gi|301611451|ref|XP_002935254.1| PREDICTED: myosin-4-like [Xenopus (Silurana) tropicalis]
          Length = 1938

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 75/214 (35%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   L+  ID   S L+ ++     LEK     E+QL +   K 
Sbjct: 1209 QIDNLQRVKQKLEKEKS--ELKMEIDDLASNLENVSKSKANLEKVNRVIEDQLSEVKSKS 1266

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +         F      + R ++ K + +  +   +     +   L+  L    
Sbjct: 1267 DEQQRLLNDLSAQRARFQTENGELSRQVEEKESLISQLSRGKQGFTQQIEELKRQLEEES 1326

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+ ++ +    +      Y+   ++  
Sbjct: 1327 KAKNALAHALQSARHDSDLLREQYEEEQEAKAELQRSLSKANGEVSQWRTKYETDAIQRT 1386

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L+E  + L Q  +   +++  +     + E+ 
Sbjct: 1387 EELEEAKKKLAQRLQDAEEQVEAVNSKCASLEKT 1420



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 75/224 (33%), Gaps = 19/224 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  +T + +  K   I  L+  I+ E+S    L  K   L+   
Sbjct: 1059 EGDLKLSQETVMDLENDKQQTEEKLKKKDFEISQLQAKIEDEQSLGSQLQKKIKELQARI 1118

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1119 EELEEEIEAERAARAKIEKQ--RADLSRELEEISERLEEAGGATSAQIEMNKKREA---- 1172

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1173 -----EFQKVRRDLEEATLQHEATAGALRKKHADSVAELGEQIDNLQRVKQKLEKEKSEL 1227

Query: 252  NLEFANYLKEIS------RDLEQNQRTFADEMSKLTILEKTREQ 289
             +E  +    +        +LE+  R   D++S++      +++
Sbjct: 1228 KMEIDDLASNLENVSKSKANLEKVNRVIEDQLSEVKSKSDEQQR 1271



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 83/227 (36%), Gaps = 21/227 (9%)

Query: 85   LTFED-IETTDLIDLKKVSIKNL----RCHIDTEKSALDFLNNKYDVLEKAF--ESREEQ 137
            L  +D +   D +  +   I+      +  I+  ++AL+       + E+     S   Q
Sbjct: 1658 LQLDDALRGQDDLKEQVAVIERRNNLQQAEIEENRAALEQTERSRKIAEQELLDASERVQ 1717

Query: 138  LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN----RLDLENKSSLLRALLS 193
            LL           K     IS +    +  +   R+          D    +  L+    
Sbjct: 1718 LLHSQNTSLIGSKKKLEADISQLQSEAEEAVQEARNAEEKAKKAITDAALMAEELKKEQD 1777

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIV----YKSTLELRENIHEQKNMLRHINELYD 249
            +      M KNL +     QN L++ E++      K   +L   + E +N L +  +   
Sbjct: 1778 TSAHLERMKKNLEQTVKDLQNRLDEAEQLAMKGGKKQLQKLETRVRELENELDNEQKRGV 1837

Query: 250  EA---NLEFANYLKEISRDLEQNQR---TFADEMSKLTILEKTREQK 290
            +A     ++   +KE++   E++++      D + KL +  K  +++
Sbjct: 1838 DAVKGVRKYERRVKELTYQTEEDRKNVLRLQDLVDKLQLKVKAYKRQ 1884


>gi|238024608|ref|YP_002908840.1| Multidrug resistance efflux pump protein [Burkholderia glumae BGR1]
 gi|237879273|gb|ACR31605.1| Multidrug resistance efflux pump protein [Burkholderia glumae BGR1]
          Length = 349

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 70/231 (30%), Gaps = 30/231 (12%)

Query: 204 NLFEKNAVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            + +  AV Q  +       +    +  +   L +         R         NL  + 
Sbjct: 62  PVVDNQAVRQGQVLFVIDQARYTLALRLAEAALAQRRATLAQARREYARNLKLGNLVASE 121

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
            L+E    +EQ +   AD    +        + T++SP+ G  + +++     Y    + 
Sbjct: 122 QLEESRTRVEQGEAALADAQVNVDTARLNLRRTTVVSPVDGY-LNDRAPRVGEYVPAGRA 180

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
           ++ +V       +       ++  +  G    +          +  +  ++ I   I  +
Sbjct: 181 VLSVV-DQHSFRVDGYFEETKLSGIHIGQPVDITV----MGEPRVLRGHVQSIVAAIEDR 235

Query: 378 DNNLQTQ---------------EYYEVILKITDLAFSDNNIELRNGFPAEV 413
           D +                   +   V + + ++    ++  L  G  A V
Sbjct: 236 DRSQGANLLPNVNPAFSWVRLAQRIPVRVSLDEV---PDDFRLIAGRTATV 283



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 58/169 (34%), Gaps = 23/169 (13%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITW--------SILLPIEISVSSSGEILNEDNVVEIK 60
           +KR   ++ + +  L +  +  L+ W        S     +  V +        +V+++ 
Sbjct: 1   MKRTWFSAGQILLTLIVAVVAALVLWRIVNYYMFSPWTR-DGHVRA--------DVIQVA 51

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
              SG++    V +   + QG  L   +    T  + L + ++   R  +   +      
Sbjct: 52  PDVSGLVTAVPVVDNQAVRQGQVLFVIDQARYTLALRLAEAALAQRRATLAQARREYAR- 110

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                 L+       EQL +   +     + + +  ++     L ++ T
Sbjct: 111 -----NLKLGNLVASEQLEESRTRVEQGEAALADAQVNVDTARLNLRRT 154


>gi|126667855|ref|ZP_01738821.1| Membrane-fusion protein [Marinobacter sp. ELB17]
 gi|126627671|gb|EAZ98302.1| Membrane-fusion protein [Marinobacter sp. ELB17]
          Length = 328

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 64/197 (32%), Gaps = 5/197 (2%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNAVSQND 215
             +      +L+R+    LN  + + +  L++  +   +  +   +  +  +  AV   D
Sbjct: 36  PELSAQQNTELSRVEVTTLNARNYQPEL-LVQGQVLPWRSVMVSARVSSTVKSLAVELGD 94

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                + +   T + R     +             A     +       +L   +   A+
Sbjct: 95  TVILGQTLLTLTDDGRSAERSRWQARVRKLNADLNAAQSLHSRNLASESELLGLESELAE 154

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             ++L +  +        +P  G +      +  +  Q    LM++V         A++ 
Sbjct: 155 AKAELEMANQAIADLAPQAPFDGVVNQKSIDT-GDLVQPGSALMRVV-QVDRLKATAQIP 212

Query: 336 PKQIQHVKKGYTATVRF 352
            + +  V +G   +VR 
Sbjct: 213 QQAVHQVAEGQLVSVRL 229



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 67/197 (34%), Gaps = 5/197 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             G++L   +V  + +  S  +K   VE G  ++ G  LLT  D   +      +  ++ 
Sbjct: 65  VQGQVLPWRSV-MVSARVSSTVKSLAVELGDTVILGQTLLTLTDDGRSAERSRWQARVRK 123

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L   ++  +S    L+++    E      E +L +   +       + +    + +  + 
Sbjct: 124 LNADLNAAQS----LHSRNLASESELLGLESELAEAKAELEMANQAIADLAPQAPFDGVV 179

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
            + +      +       +   +  L ++ Q     +  + E   VS   L+ +E     
Sbjct: 180 NQKSIDTGDLVQPGSALMRVVQVDRLKATAQIPQQAVHQVAEGQLVSVRLLDGEELSGRV 239

Query: 226 STLELRENIHEQKNMLR 242
             L    +   +   + 
Sbjct: 240 RFLASAADTGTRSFAIE 256


>gi|126640609|ref|YP_001083593.1| RND efflux transporter [Acinetobacter baumannii ATCC 17978]
 gi|126386493|gb|ABO10991.1| putative RND family drug transporter [Acinetobacter baumannii ATCC
           17978]
          Length = 288

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 79/232 (34%), Gaps = 32/232 (13%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDL 266
             ++Q D   QE  +  S   ++    ++   +  +NE   E   +   Y ++     DL
Sbjct: 13  QLIAQIDSTTQENSLKTSDANIKNLEAQRLQQIASLNEKQLEYRRQQQMYAQDATPRADL 72

Query: 267 EQNQRTFADEMSKLTILEKTRE--------------QKTILSPIAGTIVYNQSFSSSNYA 312
           E  +  +    +++  L+   E                 I++P  GT+V           
Sbjct: 73  ESAEAAYKTAQAQVKALDAQIESAKITRSTAQTNIGYTRIVAPTDGTVVAI-VTEEGQTV 131

Query: 313 QQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +Q    IV  +  +   I+A+V+   I  V+KG      F    D  ++       + 
Sbjct: 132 NANQSAPTIVKIAKLQNMTIKAQVSEADIMKVEKGQQVY--FTTLGDETKRYATLRQIEP 189

Query: 371 DPIISQQDNNLQTQE------YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            P     ++N  T        YY  +  +      + + +LR    A+V   
Sbjct: 190 APDSISSESNSTTSSTTSSAVYYNALFDVP-----NTDGKLRIDMTAQVYIV 236



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 39/120 (32%), Gaps = 9/120 (7%)

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V+ G Q+ QG  +   +     + +     +IKNL      + ++L+         EK
Sbjct: 1   MYVQLGDQVKQGQLIAQIDSTTQENSLKTSDANIKNLEAQRLQQIASLN---------EK 51

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
             E R +Q +           +       +    +K    ++ S  + R   +      R
Sbjct: 52  QLEYRRQQQMYAQDATPRADLESAEAAYKTAQAQVKALDAQIESAKITRSTAQTNIGYTR 111


>gi|15640195|ref|NP_229822.1| hypothetical protein VC0165 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|9654567|gb|AAF93341.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
          Length = 368

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 21/206 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S   + + + +V   +   R N+   +  L      Y+     FA          ++ + 
Sbjct: 87  SGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKG-SISKESYDEAEA 145

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           ++    + +  L+ T  ++ I +P AG I     F    Y Q       IV     + +R
Sbjct: 146 SYYALSADIESLKATIARREIKAPFAGVIGIRNVF-LGQYLQPGT---DIVRLEDTSVMR 201

Query: 332 AK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
            +  V  + I  +       +    Y       FK  I  I+P +S Q   +Q Q     
Sbjct: 202 LRFTVPQRDISRISLDQEVDIFVDAYPQT---SFKGSISAIEPAVSVQSGLIQVQ----- 253

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
                     +++ +LR+G  A    
Sbjct: 254 ------ADIPNSDGKLRSGMFARANI 273



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 52/138 (37%), Gaps = 1/138 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +   E+G+Q+ +  PL+  +       +   +  +   +   +  K      +   
Sbjct: 78  GVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKGSISK 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  ++A  S      D      +   +      + V     + L +      + + LE+ 
Sbjct: 138 ESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLED- 196

Query: 185 SSLLRALLSSHQKDLTMM 202
           +S++R   +  Q+D++ +
Sbjct: 197 TSVMRLRFTVPQRDISRI 214


>gi|325521319|gb|EGD00178.1| secretion protein HlyD family protein [Burkholderia sp. TJI49]
          Length = 242

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/198 (11%), Positives = 60/198 (30%), Gaps = 12/198 (6%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            + + R+    +    RA + S +          E+            R   +  ++  +
Sbjct: 1   QLDIARVQYPAQYRQARAQIESAEAAYRQAYAAQERQRAVDA------RATSQQAIDAAD 54

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                 +    + +            +++    +E+ ++      ++L   E       +
Sbjct: 55  AQRATADANVAMAQAQARTASLVPQQIRQAETAVEERRQQVLQARAQLEQAELNLSYCEM 114

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G +         ++ Q    +  IV  +   +I A     Q++ ++ G    V  
Sbjct: 115 RAPSDGWVTRRNV-QLGSFLQPGTVIFSIV--TPRVWITANFKESQLERMRIGDRVDVSV 171

Query: 353 PHYADIREKKFKAIIEKI 370
             Y D+        ++ I
Sbjct: 172 DAYPDL---DLHGRVDSI 186


>gi|320353757|ref|YP_004195096.1| RND family efflux transporter MFP subunit [Desulfobulbus
           propionicus DSM 2032]
 gi|320122259|gb|ADW17805.1| efflux transporter, RND family, MFP subunit [Desulfobulbus
           propionicus DSM 2032]
          Length = 407

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 50/128 (39%), Gaps = 3/128 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V +SG +   +N+V + +  SG +K  +VE G  +  G  +   + +   + +  +
Sbjct: 49  LETTVLASGTVE-SENMVSVGAQVSGQLKSLKVELGDTVKAGQLVAEIDSLPQQNTLRTQ 107

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             ++  +R     ++++L      Y               DF         +V    I++
Sbjct: 108 TAALAAVRAEKQAKEASLKQAELAYKRQSLMLRGDAASREDFEAA--EATLQVLRAEITA 165

Query: 160 VYRSLKMK 167
           +   ++  
Sbjct: 166 LDAQIEQA 173



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 82/269 (30%), Gaps = 24/269 (8%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  +++         L    K+  L A + S  +  T+        AV      + E+ 
Sbjct: 66  SVGAQVSGQLKSLKVELGDTVKAGQLVAEIDSLPQQNTLRTQTAALAAV------RAEKQ 119

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
             +++L+  E  +++++++   +    E        L+ +  ++             +  
Sbjct: 120 AKEASLKQAELAYKRQSLMLRGDAASREDFEAAEATLQVLRAEITALDAQIEQAKIAVDT 179

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPHSKLTYIRAKVTPKQIQ 340
            +       I SPI G +V             +Q    I  V       I+ +++   + 
Sbjct: 180 AQLDLGYTKISSPIDGVVVAI-VTKEGQTVNANQTAPTIIKVARLDRMTIKVEISEADVV 238

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE----------YYEVI 390
            V+ G           D +       IE     I   D+   +            YY  I
Sbjct: 239 RVQPGQRVYFTILGEPDRQYPAVLQSIEPAPESIENDDSTSSSSSASSSSSSTAIYYMGI 298

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           L++ +    D  + +      +V      
Sbjct: 299 LEVPNP---DGKLRIS--MTTQVNIVLAE 322


>gi|227872467|ref|ZP_03990808.1| RND family efflux transporter MFP subunit [Oribacterium sinus
           F0268]
 gi|227841698|gb|EEJ51987.1| RND family efflux transporter MFP subunit [Oribacterium sinus
           F0268]
          Length = 428

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/100 (11%), Positives = 38/100 (38%), Gaps = 2/100 (2%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-IDTEKS-ALDFLNNKY 124
           + +  V+ G ++ +G  L   +  +    ++  K  +   + +  + EK+  L++  N+ 
Sbjct: 71  VTEILVKEGDKVEKGQVLARLDKTDVNTALEAAKTQLDLAKANKTEAEKNLRLEYEKNQT 130

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            +     + + +  L   G    +  +     +     ++
Sbjct: 131 ILKNAELDFQRKSSLYSTGDIPQSDYEAAESALKDAKATM 170



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/327 (14%), Positives = 106/327 (32%), Gaps = 41/327 (12%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLE--KAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           VS++ L      EK +L    +  D  +      ++  ++L   G        +     +
Sbjct: 35  VSVQALTKGDIQEKISLSGPVSGTDAQQVTSGLHAKVTEILVKEGDKVEKGQVLARLDKT 94

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSL----LRALLSSHQKDLTMMKNLFEKNAVSQN 214
            V  +L+   T++     N+ + E    L     + +L + + D     +L+    + Q+
Sbjct: 95  DVNTALEAAKTQLDLAKANKTEAEKNLRLEYEKNQTILKNAELDFQRKSSLYSTGDIPQS 154

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           D    E  +  +   +         +++   ++ D  +L+     +E             
Sbjct: 155 DYEAAESALKDAKATMANY-----KVVKGTVKVPDSYDLQIKTAEQE------------- 196

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA-QQSQPLMKI-VPHSKLTYIRA 332
                L   E       ++SPIAGTI          +A   ++      V +     +  
Sbjct: 197 -----LEKAESKVSDADLVSPIAGTITRVNI-KVGEFADTPTENKYDFTVENLDQLELSI 250

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V+   I  V  G  AT+       +  +  + ++  I P   +++ N          + 
Sbjct: 251 AVSEYNIGKVHLGQKATI--TA-DILGGESLEGVVSSISPTGEEKNANTSE------RVI 301

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKN 419
              +  + +   L +G  A+       
Sbjct: 302 PIKVQITGDKKGLLSGITAKADLLLSE 328


>gi|187777323|ref|ZP_02993796.1| hypothetical protein CLOSPO_00875 [Clostridium sporogenes ATCC
           15579]
 gi|187774251|gb|EDU38053.1| hypothetical protein CLOSPO_00875 [Clostridium sporogenes ATCC
           15579]
          Length = 353

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 75/205 (36%), Gaps = 15/205 (7%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           D+++ E     + +E    I ++K +    N   ++ N   ++ ++++   +   +    
Sbjct: 90  DMSELENDRQVAQMEYDNAISQKKALKSQKNSEQNKMNSITSSQIEQVENSVRLAELKLE 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
               K+   E+T         I G +    + +    A Q QPL+ +V +     +   +
Sbjct: 150 SVNDKINESEETIAD------IDGIVTEVNAQAGGISAGQGQPLV-VVENVDDLKVAVSL 202

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
                  VKKG    V+        +KK++A ++ I P   +           +  L   
Sbjct: 203 GKYDSTKVKKGMKVFVK------NDDKKYEAKVDFIAPTAKKTIKEAGGGN--DTTLDCE 254

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
                +N+ +LR GF  +V      
Sbjct: 255 IYLSKNNSKDLRVGFDVDVDILLGE 279



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 11/162 (6%)

Query: 51  LNEDNVVEIKSPFSGI--IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
           +   N  E      G   IKK  V+ G ++ +G  LL F+  E  +   + ++   N   
Sbjct: 54  VVSKNKKE---YLGGQAKIKKVNVKVGDKVKKGQSLLNFDMSELENDRQVAQMEYDNAIS 110

Query: 109 HIDTEKSALDFLNNK------YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
                KS  +   NK        + +     R  +L           S+     I  +  
Sbjct: 111 QKKALKSQKNSEQNKMNSITSSQIEQVENSVRLAELKLESVNDKINESEETIADIDGIVT 170

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            +  +   + +     L +      L+  +S  + D T +K 
Sbjct: 171 EVNAQAGGISAGQGQPLVVVENVDDLKVAVSLGKYDSTKVKK 212


>gi|159111303|ref|XP_001705883.1| Coiled-coil protein [Giardia lamblia ATCC 50803]
 gi|157433974|gb|EDO78209.1| Coiled-coil protein [Giardia lamblia ATCC 50803]
          Length = 2275

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 74/196 (37%), Gaps = 3/196 (1%)

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +  LR  I   ++A+D  + +   LE     +++ +++  G+  S   +      +S  
Sbjct: 516 EVDALRRDIAALQNAIDDKDKEVKWLEDEIRQKDDTMIELRGRTESEI-ESLQETAASKD 574

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           + +      ++S       L+N  +      +  Q++   +++  ++      +LN+  R
Sbjct: 575 QEIAKLEAELKSTLQMIQALKNSEADGAGATNILQREKAHLEDKLQEKENIVAELNEALR 634

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               +  EL E+   Q+   +   + Y+    E    + ++   L   Q T A       
Sbjct: 635 KKDLTIAELHESAAAQQRKEQETIDFYENLKREQNQVISDLRSSLSAKQATLAMAEETAK 694

Query: 282 ILEKTREQKTILSPIA 297
            LE   +  ++ S + 
Sbjct: 695 TLESEVQ--SLKSEVD 708


>gi|151941941|gb|EDN60297.1| essential protein involved in intracellular protein transport
            [Saccharomyces cerevisiae YJM789]
          Length = 1796

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 94/226 (41%), Gaps = 20/226 (8%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            ++ +    L  E I+        K  + +LR ++++ +   + L  +    E+   ++E 
Sbjct: 1114 EVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKER 1173

Query: 137  QLLDFLGKYHS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            Q  + + + +   T ++  N  I      L+ ++  M+S    + +L  K S + AL   
Sbjct: 1174 QYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNL--KKSEIDALNLQ 1231

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-- 252
                   +K L +KN  ++  L +  + +   T++++E   E     + ++EL D+    
Sbjct: 1232 -------IKELKKKNETNEASLLESIKSIESETVKIKELQDECNFKEKEVSELEDKLKAS 1284

Query: 253  -------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                   LE     ++I  +L+        ++ K+T L K +E+  
Sbjct: 1285 EDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSE 1330



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 11/203 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            ++    D  +  I  L+  ++T  +A D   NK   L K  E  E +L  +    +   +
Sbjct: 1044 KSDSSKDEYESQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELET 1103

Query: 151  KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH---QKDLTMMKNL 205
            K+      +  V  + +        +     + + + + LRA L S     +DL      
Sbjct: 1104 KLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKK 1163

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            +E+   ++      ER   +   +L + I   +     I +  DE   E           
Sbjct: 1164 YEEQIANK------ERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQ 1217

Query: 266  LEQNQRTFADEMSKLTILEKTRE 288
                +        ++  L+K  E
Sbjct: 1218 SNLKKSEIDALNLQIKELKKKNE 1240


>gi|150373001|dbj|BAF66266.1| multidrug efflux transporter VexC [Vibrio cholerae]
          Length = 346

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 54/167 (32%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L + +  +    ++  ++ + N        K+  D     
Sbjct: 59  SGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELNNTEQEYRRAKAIFDKTQAI 118

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       GI S          +   + +   
Sbjct: 119 SKAELDKVTNRYDLAKNRVDEAKRKLEYTQITAPFDGIISEKTVENFAQVQANQVIMILQ 178

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +    +          +   + + E +A+     + Q R     
Sbjct: 179 DLSDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLQLRTYSTQ 225



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 62/205 (30%), Gaps = 25/205 (12%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + +    + + +  +   +  L +  + Y  A   F         +L++    + 
Sbjct: 72  QVKKGQLLASLDSRDAKTALEAAQLELNNTEQEYRRAKAIFDKTQAISKAELDKVTNRYD 131

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I +P  G I      + +   Q +Q +M I+       +  ++
Sbjct: 132 LAKNRVDEAKRKLEYTQITAPFDGIISEKTVENFAQV-QANQVIM-ILQDLSDLEVAIEI 189

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-----YEV 389
                          V          +    +    +     Q     TQ       Y V
Sbjct: 190 ------------PHRVMLS--GVRNTRAIAELSAIPNQQFDLQLRTYSTQPSSDSQTYSV 235

Query: 390 ILKITDLAFSDNNIELRNGFPAEVL 414
           +L   DL        +  G  A+V+
Sbjct: 236 VLGFEDL----KGFRVMPGMSAKVI 256


>gi|325474984|gb|EGC78170.1| efflux transporter [Treponema denticola F0402]
          Length = 299

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 41/95 (43%), Gaps = 3/95 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+  +  SG I        ++SP  G+IKK  V+ G  + +G  +   ++      +  +
Sbjct: 27  IQDVIQVSGYIQPAQQ-QNLQSPGEGLIKKVAVKEGDIVKKGDLIFALDNTYQAFQVAKQ 85

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           +  I+  +  +      L+ +  + + L++A   R
Sbjct: 86  EFLIE--KEQLQGYSKNLELMKLELESLKRALRDR 118


>gi|282878849|ref|ZP_06287616.1| efflux transporter, RND family, MFP subunit [Prevotella buccalis
           ATCC 35310]
 gi|281299057|gb|EFA91459.1| efflux transporter, RND family, MFP subunit [Prevotella buccalis
           ATCC 35310]
          Length = 386

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 29/299 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +E+Q  D + K   T  +V   GI     +  M ++ +       +D ++++++   +  
Sbjct: 28  QEKQSSDSMTKVELTDEQVKKLGIKVGNIADTMLISSVDVNGKLAVDPQSEATITPQMGG 87

Query: 194 SHQKDLTMMKNLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           + ++ L        K  V    S  DL   +   + +    R    E        NE   
Sbjct: 88  NVKQILVHQGQSVSKGMVVAYLSHPDLVNLQTDYFSALNRQRYLKKEFDRQTMMQNEGVG 147

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ------KTILSPIAGTIVYN 303
            A  ++     E+     Q Q   A ++ +L I      +        + SPI GT+   
Sbjct: 148 -AGKDYDRTKSELQTVSGQVQM-LAAQLKQLGISPSALRKGKPMLAIALRSPINGTVEQI 205

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
              +   Y      +MKI  ++   Y   +V  + +  +K G    ++  H         
Sbjct: 206 NVQT-GQYVSPEMAMMKIA-NTSNMYAELQVFQRDVPKIKVGQDVALKIVHADGT---AC 260

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA-KNTT 421
           K  +  I      +   +       V +++        +  L  G   +         T
Sbjct: 261 KGKVYSIGKTFRAETQTVD------VRVRLD-----GQHTGLIVGMYVQAKIATSSERT 308



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 64/178 (35%), Gaps = 4/178 (2%)

Query: 42  ISVSSSGEILNEDNVV-EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
            SV  +G++  +      I     G +K+  V  G  + +G  +      +  +L     
Sbjct: 63  SSVDVNGKLAVDPQSEATITPQMGGNVKQILVHQGQSVSKGMVVAYLSHPDLVNLQTDYF 122

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--S 158
            ++   R ++  E      + N+     K ++  + +L    G+     +++   GI  S
Sbjct: 123 SALNRQR-YLKKEFDRQTMMQNEGVGAGKDYDRTKSELQTVSGQVQMLAAQLKQLGISPS 181

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           ++ +   M    +RS     ++  N  +            +    N++ +  V Q D+
Sbjct: 182 ALRKGKPMLAIALRSPINGTVEQINVQTGQYVSPEMAMMKIANTSNMYAELQVFQRDV 239


>gi|240014694|ref|ZP_04721607.1| MacA [Neisseria gonorrhoeae DGI18]
 gi|240121215|ref|ZP_04734177.1| MacA [Neisseria gonorrhoeae PID24-1]
          Length = 392

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 58/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++++
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLNME 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQTVLWKDDATSKEDLESAQDALAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 83/257 (32%), Gaps = 26/257 (10%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               +++ +Y+       K  L+  + S+ Q +   M+        S+ +  Q + +  +
Sbjct: 64  QASGQIKKLYVKLGQQVKKGDLIAEINSTTQTNTLNMEK-------SKLETYQAKLVSAQ 116

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             L   E  ++++ +L   +    E      + L     ++ + +         +   E 
Sbjct: 117 IALGSAEKKYKRQTVLWKDDATSKEDLESAQDALAAAKANVAELKALIRQSKISINTAES 176

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVK 343
                 I + + GT+V             +Q    I+  +       + ++    I  VK
Sbjct: 177 DLGYTRITATMDGTVVAIPV-EEGQTVNAAQSAPTIIQLANLDTMLNKMQIAEGDITKVK 235

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVILKITD 395
            G    + F   ++      KA ++ +DP ++           +      YY     +  
Sbjct: 236 AGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYARSFVP- 291

Query: 396 LAFSDNNIELRNGFPAE 412
               + + +L  G   +
Sbjct: 292 ----NPDGKLATGMTTQ 304


>gi|284039436|ref|YP_003389366.1| efflux transporter RND family, MFP subunit [Spirosoma linguale DSM
           74]
 gi|283818729|gb|ADB40567.1| efflux transporter, RND family, MFP subunit [Spirosoma linguale DSM
           74]
          Length = 415

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 75/217 (34%), Gaps = 24/217 (11%)

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           S  +Q    L   + +    F    +   R +       + + + R  L    + L A +
Sbjct: 93  STVKQGDVLLKLENQSLKLSFLQSETEANRLVNDLQNTRQRLQVERFTLRKTLADLDAQI 152

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              +        L++   VS+ D  + +R   +   +    I  QK         Y E N
Sbjct: 153 DQAKDSYDRQAKLYKDKVVSEEDYLKAKRAYERLAGQRTIEIETQK---------YQEDN 203

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            +F   +K++   L++ Q+  A       + ++T +   + +P++G +         +  
Sbjct: 204 AKFQ--IKQLEGTLQRTQKNVA-------LWQQTLDNLVVKAPVSGQLSSIDV-EVGSNI 253

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTP--KQIQHVKKGYT 347
            + Q + +I     L   + +V      I  V  G  
Sbjct: 254 NRGQNIGQI---DDLNGFKMRVGVDEHYISRVFAGLK 287



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 88/222 (39%), Gaps = 20/222 (9%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIK--SPFSGIIKKFQVENGSQILQGTPLLTFED---- 89
              P E  ++ +G +     +  I+  +   G + +  VE GS + QG  LL  E+    
Sbjct: 54  STGPFEDFIAVTGVVQP---LKTIRLDAIEGGYVTQKLVEGGSTVKQGDVLLKLENQSLK 110

Query: 90  ---IETTDLIDLKKVSIKNLRCHIDTEK-SALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +++    +     ++N R  +  E+ +    L +    +++A +S + Q   +  K 
Sbjct: 111 LSFLQSETEANRLVNDLQNTRQRLQVERFTLRKTLADLDAQIDQAKDSYDRQAKLYKDKV 170

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            S   + +     +  R    +   + +      + + +   L   L   QK++ + +  
Sbjct: 171 VSE--EDYLKAKRAYERLAGQRTIEIETQKYQEDNAKFQIKQLEGTLQRTQKNVALWQQT 228

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            + N V +  ++ Q   +    +E+  NI+ +   +  I++L
Sbjct: 229 LD-NLVVKAPVSGQ---LSSIDVEVGSNIN-RGQNIGQIDDL 265


>gi|254434830|ref|ZP_05048338.1| efflux transporter, RND family, MFP subunit, putative
           [Nitrosococcus oceani AFC27]
 gi|207091163|gb|EDZ68434.1| efflux transporter, RND family, MFP subunit, putative
           [Nitrosococcus oceani AFC27]
          Length = 593

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 66/180 (36%), Gaps = 16/180 (8%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +L    E         ++ L + +R   +       E++ L    ++ +   I +P+ G
Sbjct: 352 ELLAAQQEYLTLRQRSASSTLLDAARKRLELWDMTNGEIAALARRGESLDYVPIHAPLGG 411

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T+V           Q  + LM+I       ++ A+V   ++  V+ G +A V  P+  + 
Sbjct: 412 TVVMKNVV-EGTARQAGETLMRIA-DLSRVWVEAEVYEAELPLVRAGMSAEVHLPYLPNQ 469

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
               F+  I+ + P +                ++IT     + +  L+    AEV   A 
Sbjct: 470 ---VFQGDIDYVYPYLDGDSRTG--------RVRIT---LENPDGVLKPEMYAEVKLKAD 515


>gi|154124934|gb|ABS59208.1| hypothetical multidrug resistance efflux pump [Photobacterium
           leiognathi]
          Length = 272

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 74/232 (31%), Gaps = 25/232 (10%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q +       S  +K +   +      L+         +      E      + L  + Q
Sbjct: 63  QHVSANQPLFSIDAKPYQIAVEQAKAELQQAQEANAGTWQQLAAAEQVVLQKKTLWKNAQ 122

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             L   + L  K   ++ +L+        +   +     +   +   ++   + A +E A
Sbjct: 123 NKLVRYQTLSRKGLTTRQELDDAISAADVAKSAISAAQADVLKIKATLSGKKNTAAVELA 182

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                                +KL   E      TI++  AGT+   Q  +   Y  +  
Sbjct: 183 Q--------------------AKLARAEWDLSNTTIVAKTAGTVSNLQLDA-GTYVNKGT 221

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
           P++ +V + K +++ A    K I H++      +    +     + F+  IE
Sbjct: 222 PILFLV-NEKNSWLSADFNEKGIAHLQPDNHVLI---SFDSQPGRVFEGEIE 269



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 60/179 (33%), Gaps = 3/179 (1%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + L S+IG     + + LL  +     + +     +VV I    SG I    V NG  + 
Sbjct: 8   IMLYSVIGFALAFS-AFLLIADNVSPFTTQATLYKSVVNIAPEVSGNITHVDVINGQHVS 66

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
              PL + +       ++  K  ++  +         L          +  +++ + +L+
Sbjct: 67  ANQPLFSIDAKPYQIAVEQAKAELQQAQEANAGTWQQLAAAEQVVLQKKTLWKNAQNKLV 126

Query: 140 DFL--GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            +    +   T  +  +  IS+   +          +   +  L  K +     L+  +
Sbjct: 127 RYQTLSRKGLTTRQELDDAISAADVAKSAISAAQADVLKIKATLSGKKNTAAVELAQAK 185


>gi|332096106|gb|EGJ01111.1| hypothetical protein SB359474_1673 [Shigella boydii 3594-74]
          Length = 256

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 23/209 (11%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + K    +  ++       +  N+ +   V+  DL            EL     +     
Sbjct: 8   DGKIRAEKVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQ 66

Query: 242 RHINELYDEANLEF--------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             + +  +EAN           A  L   + +++  Q +     + L   +    Q  I 
Sbjct: 67  SDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIR 126

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTAT 349
           +P++G +    +    +YA   +PL  +V       I      K+      H+++G  A 
Sbjct: 127 APVSGWVTNLTTR-IGDYADTGKPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQ 180

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +          K  +  +  I   I  Q 
Sbjct: 181 ITL----YSDNKTLRGHVSSIGRAIYDQS 205



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 38/122 (31%), Gaps = 11/122 (9%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKV 101
            G+I  E   V I    SG I +  +++   +  G  LLT +       E      L K 
Sbjct: 8   DGKIRAE--KVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKA 65

Query: 102 SIKNLRCHIDTEKSALDFLNN----KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                + + +  +      N     + D      ++ +  +         T  ++    I
Sbjct: 66  QSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEI 125

Query: 158 SS 159
            +
Sbjct: 126 RA 127


>gi|33597922|ref|NP_885565.1| HlyD family secretion protein [Bordetella parapertussis 12822]
 gi|33574351|emb|CAE38687.1| probable HlyD-family secretion protein [Bordetella parapertussis]
          Length = 368

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 73/225 (32%), Gaps = 21/225 (9%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               R ++   + D  + +  FE     Q      +        +L     + +N    +
Sbjct: 62  LQASRQVVIPAEVDGRIARIAFESGQAVQAGQVLAQLNDAPEQGDLARLQAQLRNARSVL 121

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                    + A      +  L+Q +  +     ++  ++   EQK + +P  G ++  +
Sbjct: 122 ERTRRLVPQQAA-----TAEQLDQARAAYDQAAGEVRRVQALVEQKQVKAPFDG-VLGVR 175

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                 + +  +P++ +   ++  Y    +  + ++ ++ G   +V    Y       F 
Sbjct: 176 RVDLGQFVRAGEPVVSLT-DARTMYADITLPEQALRDIRTGQAVSVGVDAYPGR---AFD 231

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            ++  I+P +S Q               +      + +  L  G 
Sbjct: 232 GVVSTIEPQVSAQ-----------ARTLLVRATLPNPDGVLAPGM 265



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 42/128 (32%), Gaps = 1/128 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V+ +G    + +   +      G I +   E+G  +  G  L    D      +   +  
Sbjct: 54  VTLAGIGTLQASRQVVIPAEVDGRIARIAFESGQAVQAGQVLAQLNDAPEQGDLARLQAQ 113

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           ++N R  ++  +  +       + L++A  + ++   +          K        V  
Sbjct: 114 LRNARSVLERTRRLVPQQAATAEQLDQARAAYDQAAGEVRRVQALVEQKQVKAPFDGVLG 173

Query: 163 SLKMKLTR 170
             ++ L +
Sbjct: 174 VRRVDLGQ 181


>gi|305666172|ref|YP_003862459.1| RND family efflux transporter MFP subunit [Maribacter sp. HTCC2170]
 gi|88707670|gb|EAQ99911.1| efflux transporter, MFP component, RND family protein [Maribacter
           sp. HTCC2170]
          Length = 416

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 62/417 (14%), Positives = 133/417 (31%), Gaps = 108/417 (25%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILL------PIEISVSSSGE----ILNEDNV 56
           K LK  H A +    LL  +    +++ S+         + +   + G+    I    NV
Sbjct: 9   KGLKPKHYAYIAGAILLLFVLYKLVMSTSVSTFRAEKDKLSLGEITQGKFDDYITINGNV 68

Query: 57  VEI-----KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
             I      +   G + +  +E G+ + +G  +L  E+               NL   I 
Sbjct: 69  APIATIYMDAYEGGRVNEKLIEEGAMVKKGDIILKLEN--------------MNLYEQIL 114

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +S L    N     +  F+SR                                ++   
Sbjct: 115 ASESNLALKQNDLRSTKLTFDSR--------------------------------QVEGR 142

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           RS+     DL+             +++    + L+ +  +S+         + K   EL 
Sbjct: 143 RSLATASTDLQR-----------LKRNFEQNQALYNEELISKETYL-----LSKENYELS 186

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +  H+   M    ++   + +L   +       DL + ++T      +L       +   
Sbjct: 187 QKQHDIVKMQTVNDDELRKTSLTGLD------ADLARMKKTLGMVYERL-------DHLN 233

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-VPHSKLTYIRAKVTPKQIQHV-------- 342
           + +P  G + +  +        Q + + +I V       I A +    I  V        
Sbjct: 234 VRAPADGQLGFLDA-EIGQNIGQGERIGQINVLTD--FKIEADIDEHYIDRVKRDLNATF 290

Query: 343 -KKGYTATVRFPH-YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            + G    +R    Y ++R  +FK  +         +  N++  + Y + L++ + +
Sbjct: 291 ERNGQEYELRLRKVYPEVRSGRFKVDLV----FTGDKPENIRAGQSYNIKLQLGESS 343


>gi|300114234|ref|YP_003760809.1| RND family efflux transporter MFP subunit [Nitrosococcus watsonii
           C-113]
 gi|299540171|gb|ADJ28488.1| efflux transporter, RND family, MFP subunit [Nitrosococcus watsonii
           C-113]
          Length = 625

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 66/180 (36%), Gaps = 16/180 (8%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +L    E         ++ L + +R   +     + E++ L    +  +   I +P++G
Sbjct: 384 ELLAAQQEYLTLRQRSASSTLLDAARKRLELWDMTSGEIAALARRGEPLDYVPIHAPLSG 443

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T+V           Q  + LM+I       ++ A+V   ++  ++ G +A VR P+  + 
Sbjct: 444 TVVMKNVV-EGTARQAGETLMRIA-DLSRVWVEAEVYEAELPLMRAGMSAEVRLPYLPNQ 501

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
               F+  I+ + P +              V +        + +  L+    AEV   A 
Sbjct: 502 ---VFQGDIDYVYPYLDGDSRTG------RVRII-----LENPDGVLKPEMYAEVKLKAD 547


>gi|254786258|ref|YP_003073687.1| membrane fusion protein family protein [Teredinibacter turnerae
           T7901]
 gi|237686347|gb|ACR13611.1| membrane fusion protein family protein [Teredinibacter turnerae
           T7901]
          Length = 314

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 49/366 (13%), Positives = 106/366 (28%), Gaps = 99/366 (27%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I +P +G I +  V  G  I +G  ++T +D                    +   ++   
Sbjct: 39  ISAPQAGWINQLNVTEGQPISEGDIVVTLDDESQ----------------RLAVSQAQAQ 82

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               +   L+    +R E++        S  + +    ++                    
Sbjct: 83  VAVAQQQALDLGQGARSEEIASTEYLLKSQQATLEESRLA-------------------- 122

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
                               L   K L  KN  +++D ++ +     +  ++ +   + K
Sbjct: 123 --------------------LERQKELLAKNLTAKSDFDEADARYSVAKAQVEQTRQQLK 162

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +     E                   LE  + T       L   +   +Q+TI+S  +G
Sbjct: 163 LLKLPARE-----------------HQLEAARNTEKSAEQALAQQQWQLQQRTIISRNSG 205

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
            +     +    Y     P++ ++ P S    +R  V+   +  +  G    +   +   
Sbjct: 206 IVDTL-FYRQGEYVSPGTPILSVIRPESTK--VRFYVSQALLSEISPGQAVKIINDNNDQ 262

Query: 358 I--------REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                    R+ +F   +           N  + +  Y V   +T  +       LR G 
Sbjct: 263 RQAAITYIGRQPEFAPPVLY--------SNQSRAELVYLVEATLTPAS------GLRPGQ 308

Query: 410 PAEVLF 415
           P +V  
Sbjct: 309 PVDVYL 314


>gi|104783701|ref|YP_610199.1| multidrug RND transporter, membrane fusion protein [Pseudomonas
           entomophila L48]
 gi|95112688|emb|CAK17416.1| putative multidrug RND transporter, membrane fusion protein
           [Pseudomonas entomophila L48]
          Length = 361

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 22/191 (11%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
              EL     E +    H   L   A         E  R L+  +  F      L  ++ 
Sbjct: 104 EEGELTRLRGEFEAAKTHYGRLQALARNG-----AESQRALDSARAQFDAAKGNLENIQA 158

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              QKTI +P +G  +  +     +Y Q  +PL  +   +    +   V+ +   ++ KG
Sbjct: 159 QIAQKTIRAPFSGE-LGIRQVHLGDYVQAGRPLATLTDLNG-LRVNFTVSERDSANIVKG 216

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
               +    ++ ++   F+  +  IDP ++               +        ++  +L
Sbjct: 217 QAVELAVDAWSGMK---FEGTVSAIDPQVNNS------------HVIKVQALLKEHQGKL 261

Query: 406 RNGFPAEVLFT 416
           R G  A+V   
Sbjct: 262 RPGMYAKVKVQ 272


>gi|307566442|ref|ZP_07628877.1| efflux transporter, RND family, MFP subunit [Prevotella amnii CRIS
           21A-A]
 gi|307344867|gb|EFN90269.1| efflux transporter, RND family, MFP subunit [Prevotella amnii CRIS
           21A-A]
          Length = 386

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 68/219 (31%), Gaps = 25/219 (11%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +S  DL   +   + +    R    E       +NE    A  ++     E+     Q 
Sbjct: 108 YLSHPDLVNLQTDYFSALNRQRYLKKEFDRQTMMMNEGVG-AGKDYDRTKSELQTVSGQV 166

Query: 270 QRTFADEMSKLTILEKTREQ------KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           Q   A ++ +L I      +        + SPI GT+      +   Y      +MKI  
Sbjct: 167 QM-LAAQLKQLGISTSALRKGKPMLVIALTSPINGTVEQINVQT-GQYVSPEMAMMKIA- 223

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           ++   Y   +V  + +  +K G    ++  H         K  +  I  I   +   +  
Sbjct: 224 NTSNMYAELQVFQRDVPKIKVGQDVALKIVHADGT---ACKGKVYSIGKIFRAETQTV-- 278

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA-KNTT 421
               EV +++        +  L  G   +         T
Sbjct: 279 ----EVRVRLD-----GQHTGLIVGMYVQAKIATSSERT 308



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 37/101 (36%), Gaps = 1/101 (0%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            I     G +K+  V  G  + +G  +      +  +L      ++   R ++  E    
Sbjct: 80  TITPQMGGNVKQILVHEGQSVTKGMVVAYLSHPDLVNLQTDYFSALNRQR-YLKKEFDRQ 138

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + N+     K ++  + +L    G+     +++   GIS
Sbjct: 139 TMMMNEGVGAGKDYDRTKSELQTVSGQVQMLAAQLKQLGIS 179


>gi|296201331|ref|XP_002748010.1| PREDICTED: centrobin, partial [Callithrix jacchus]
          Length = 907

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 69/204 (33%), Gaps = 13/204 (6%)

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +      R    +E  AL+ L    +   + +  +E QL +                  
Sbjct: 312 LQEERDAARAGQLSEHRALEALQAALEEERQTWAQQELQLKEHYQALQLESQAHLEREKE 371

Query: 159 SVYRSLKMKLTRMRSIYLNRLD---LENKSSLLRALLSSHQKDLTMMKNLFEKNAVS--- 212
              R  +        + L + D   LE +    R    + Q ++++++  +E   +    
Sbjct: 372 KGQREAQAAREAQHQLALVQSDMRRLEGELDTARRERDALQLEMSLVQARYESQRIQMES 431

Query: 213 ----QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS---RD 265
               Q +    ER+       LR+    ++   + + +L  +   E AN L +      +
Sbjct: 432 ELAVQLEQQVTERLAQAQESSLRQAASLREQHRKQLQDLSGQHQQELANQLAQFKVEMAE 491

Query: 266 LEQNQRTFADEMSKLTILEKTREQ 289
            E+ Q+  A++       E+ R +
Sbjct: 492 REERQQQVAEDYELRLAREQARVR 515



 Score = 43.5 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 21/202 (10%), Positives = 64/202 (31%), Gaps = 2/202 (0%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                 +     ++ + +     ++   + L  +   L  + E  +++      +  +  
Sbjct: 261 TRLEQSLSEAMEALNHEQESTRLQQRERETLEEERQALTLSLEVEQQRCCALQEERDAAR 320

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +   +   +       ++  R           E+  +L     +  +++    +   +  
Sbjct: 321 AGQLSEHRALEALQAALEEERQTWAQQELQLKEHYQALQLESQAHLEREKEKGQREAQAA 380

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ- 268
             +Q+ L   +  + +   EL     E+  +   ++ +      +      E++  LEQ 
Sbjct: 381 REAQHQLALVQSDMRRLEGELDTARRERDALQLEMSLVQARYESQRIQMESELAVQLEQQ 440

Query: 269 -NQRTFADEMSKLTILEKTREQ 289
             +R    + S L      REQ
Sbjct: 441 VTERLAQAQESSLRQAASLREQ 462


>gi|317131066|ref|YP_004090380.1| biotin/lipoyl attachment domain-containing protein [Ethanoligenens
           harbinense YUAN-3]
 gi|315469045|gb|ADU25649.1| biotin/lipoyl attachment domain-containing protein [Ethanoligenens
           harbinense YUAN-3]
          Length = 322

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 37/129 (28%), Gaps = 15/129 (11%)

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +P+ G +V     +     Q    + + V  +        V    I  VK G  A V
Sbjct: 105 DITAPMDG-VVALSQLTVGTPVQPGMTVCQ-VQSAASFNAVVNVDELDIAGVKAGQKADV 162

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
                  I  K F   ++KI  +    +        + V L + D     +N        
Sbjct: 163 SVDA---ISGKLFSGTVQKISQVGVATNGVTD----FSVTLSMDDSTGLMSN------MS 209

Query: 411 AEVLFTAKN 419
           A        
Sbjct: 210 ASADIHTGE 218


>gi|269965356|ref|ZP_06179476.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269830002|gb|EEZ84231.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 376

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 75/232 (32%), Gaps = 23/232 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   ++ +   +K        +  +  + E      +A     Q++ +  +  F++ A +
Sbjct: 99  FEAEVARLEAKVKEASQGALGLESDLREAEAAVLKAQADRDKAQREFSRYQRGFDRGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + DL+ + +    +   L   I +Q+     ++      N + A  L E           
Sbjct: 159 EQDLDTRRQAYKAAEAMLDVAILQQEQAKIALDSEIGGENTQVAQLLAE----------- 207

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
                  L   E   EQ  + +P  G +                 P M  V    +TY  
Sbjct: 208 -------LRKAEFNLEQTVVRAPTDGYVTQLALRPGVMAVPLPLAPAMTFVHTEDITYTA 260

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           A      +Q +K G+ A   F     I  K F+  +  + P I +     + 
Sbjct: 261 A-FRQNSLQRLKPGFEAEFMFRA---IPGKVFRGEVIDVIPAIGESQIQARG 308



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 48/147 (32%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-----NLRCHIDTEKSALDF 119
           G + +  V+    +  G  L   + +     +   +  +K      L    D  ++    
Sbjct: 72  GRVVEVPVQANQPLKTGDILFKIDPVPFEAEVARLEAKVKEASQGALGLESDLREAEAAV 131

Query: 120 LNNKYDVLEKAFE-SREEQLLD---FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           L  + D  +   E SR ++  D   F  +   T  + +    + +  ++  +     ++ 
Sbjct: 132 LKAQADRDKAQREFSRYQRGFDRGAFTEQDLDTRRQAYKAAEAMLDVAILQQEQAKIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                   + + L A L   + +L   
Sbjct: 192 SEIGGENTQVAQLLAELRKAEFNLEQT 218


>gi|254708689|ref|ZP_05170500.1| efflux transporter, RND family, MFP subunit [Brucella pinnipedialis
           B2/94]
 gi|256030215|ref|ZP_05443829.1| efflux transporter, RND family, MFP subunit [Brucella pinnipedialis
           M292/94/1]
 gi|261316181|ref|ZP_05955378.1| efflux transporter [Brucella pinnipedialis B2/94]
 gi|261295404|gb|EEX98900.1| efflux transporter [Brucella pinnipedialis B2/94]
          Length = 329

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 15/210 (7%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q D  + + +   + L L++    ++  L     +      +    L     +++    
Sbjct: 48  AQLDNLKAQLLSKDAQLTLKKLNAARQKSLLATRGVSQATVDQANADLLMAEAEVKALNA 107

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL--TY 329
               + ++L   +      +I SP+ GT+V   +          Q    IV  + L    
Sbjct: 108 QIRQQEAQLASDKVDLGYTSIYSPMEGTVVDEAA-KEGETLNAVQSAPTIVTVADLKVMT 166

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A+V+   I  +K G      F        K+F   + +I P  +  +N +    YY +
Sbjct: 167 VEAQVSEADISKLKPGMPVY--FTLLGQPD-KRFTGTLRQIKPTPATDNNVVL---YYAL 220

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                     +   EL     A+V F    
Sbjct: 221 F------DVPNPTGELMIDMSAQVYFVLGE 244



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V + +  SG +K  +VE G  + QG  +   +       +++    + NL+  + ++ 
Sbjct: 2   RSVNVGAQVSGQLKSVKVEVGDHVKQGQLIAEIDPSPFEKKVEIAGAQLDNLKAQLLSKD 61

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           + L         L+K   +R++ LL   G   +T  +  N  +      +K    ++R  
Sbjct: 62  AQL--------TLKKLNAARQKSLLATRGVSQATVDQA-NADLLMAEAEVKALNAQIRQQ 112

Query: 175 YLNRLD 180
                 
Sbjct: 113 EAQLAS 118


>gi|288573260|ref|ZP_06391617.1| efflux transporter, RND family, MFP subunit [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569001|gb|EFC90558.1| efflux transporter, RND family, MFP subunit [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 424

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/180 (11%), Positives = 57/180 (31%), Gaps = 3/180 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   +  G +      V++    SG + +     G ++ +G  L   +  +    ++  +
Sbjct: 55  DSVRTVPGRVRPS-KRVDMAFRVSGPLVELPAREGDRVSKGDLLARIDPRDFRLALEQAR 113

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            ++   + ++D  K      + +    + A      +  +   +      +      S  
Sbjct: 114 GALSQAKANLDAMKKGARNEDLRSLEAQVASAQARAEEAEAQFRRFERLYQAKVISQSEY 173

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            R    K+    S+   R +L       R       +  + +K+L  +   +   L   E
Sbjct: 174 DRYRTAKVVAESSLAAARQELRKARKGARDEDIKAME--SGIKSLEAREKAAAAALVDTE 231



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/310 (10%), Positives = 89/310 (28%), Gaps = 50/310 (16%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +  + F  +   V   A E       D L +      ++            K  L  M+ 
Sbjct: 69  RVDMAFRVSGPLVELPAREGDRVSKGDLLARIDPRDFRLALEQARGALSQAKANLDAMKK 128

Query: 174 IYLNR--LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
              N     LE + +  +A     +      + L++   +SQ++ ++       +   L 
Sbjct: 129 GARNEDLRSLEAQVASAQARAEEAEAQFRRFERLYQAKVISQSEYDRYRTAKVVAESSLA 188

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               E +   +   +                  D++  +       ++            
Sbjct: 189 AARQELRKARKGARD-----------------EDIKAMESGIKSLEAREKAAAAALVDTE 231

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPL--------MKIVPHSKLTYIRAKVTPKQIQHVK 343
           + +P  G +V ++   +  +    QP+        ++IV  + +    A++ P+ +    
Sbjct: 232 LRAPFDG-VVSSRMVENYQFLTARQPVIGLQSTSSVEIV--ADVPESAARLDPEDLDV-- 286

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
                   +  +  +  + F   + +   +  ++         Y     +         +
Sbjct: 287 --------WASFNFLPGRDFPLKLVEFSSVPDRETQT------YRATFSMD----IPEGV 328

Query: 404 ELRNGFPAEV 413
            L  G   +V
Sbjct: 329 RLLPGMAVQV 338


>gi|227536232|ref|ZP_03966281.1| HlyD-family transporter [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243839|gb|EEI93854.1| HlyD-family transporter [Sphingobacterium spiritivorum ATCC 33300]
          Length = 177

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 51/147 (34%), Gaps = 16/147 (10%)

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI-RAKVTPKQIQHVKKGY 346
               + + I GT+ Y Q      + +    L+ ++P+++   I +  +  +    +K   
Sbjct: 30  RNYLVYASIDGTLSYLQFLGEKQFVKAGTTLLSVLPNNRQITIGQMHIGAQNQGKIKSDQ 89

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL- 405
              ++  +Y        K  I+ I  +  +          Y V + + +   +  +  L 
Sbjct: 90  KVLIKLDNYKYQEYGIIKGKIKSIAMVQDKDSK-------YYVEVSLPEGLQTSYHKTLA 142

Query: 406 ----RNGFPAEVLFTAKNTTLAQEIIH 428
                +G         +  TLA+ I+ 
Sbjct: 143 FDKELSG---TADIVTEELTLAERILS 166


>gi|225350594|gb|ACN88158.1| SilD [Streptococcus pyogenes]
 gi|225350603|gb|ACN88164.1| SilD [Streptococcus pyogenes]
 gi|225350609|gb|ACN88168.1| SilD [Streptococcus pyogenes]
          Length = 319

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 83/245 (33%), Gaps = 14/245 (5%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL------RALLSSHQKDLT 200
           +  + + N+ IS +   L     ++      +  + N+   L      +  L  +Q    
Sbjct: 29  NNQASLANHAISVITSQLDELHQKITDYEELKQAINNQEYKLSPENPHQTALKKYQTQFQ 88

Query: 201 MMK--NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
             +  +  ++  +SQ   N  E     + L ++       N          + ++    +
Sbjct: 89  AQEDNSALKEEYLSQIPQNISELESSMANLSIQR--ASTGNFSLPDTSHRIKIDILKTQF 146

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L+  S+ L   +    +  +++       +   I++P  GTI  N  F   +       +
Sbjct: 147 LQNASQQLTTVENQITELKNQIEQANIQLKNNIIIAPETGTIHLNSEFEGKSLIPNGSEV 206

Query: 319 MKIVPHSK---LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            +I P  +     +I   VT + +  +K+     +      + +       I+ ID   +
Sbjct: 207 AQIYPDIQKIKEVFITYYVTSEHVSLLKEKQGVRLSLEKVGN-QTLTINGTIQTIDKSAT 265

Query: 376 QQDNN 380
           + +  
Sbjct: 266 KTNQG 270


>gi|225025496|ref|ZP_03714688.1| hypothetical protein EIKCOROL_02396 [Eikenella corrodens ATCC
           23834]
 gi|224941780|gb|EEG22989.1| hypothetical protein EIKCOROL_02396 [Eikenella corrodens ATCC
           23834]
          Length = 387

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 55/152 (36%), Gaps = 10/152 (6%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  +VS++GEI +   +V++ +  SG IK   V+ G  + +G  +   +     + ++
Sbjct: 42  ADVRQTVSATGEI-SAAQLVDVGAQASGQIKHLYVKLGQHVEKGDLIAEIDSTTQLNALN 100

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K  ++  +  + + + AL     KY         R EQ L           +      
Sbjct: 101 TNKAKLETYQAQLVSARVALQNAERKY---------RREQALWAENATSKEELESAQGSY 151

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           ++    +    + +R   +     E      R
Sbjct: 152 AAAKAQVGELQSSIRQTRIAINTAEADLGYTR 183



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 68/218 (31%), Gaps = 19/218 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++ +  Q + +  +  L+  E  + ++  L   N    E               + + Q 
Sbjct: 104 AKLETYQAQLVSARVALQNAERKYRREQALWAENATSKEELESAQGSYAAAKAQVGELQS 163

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPHSKLTY 329
           +       +   E       I +PI+GT+V  +           Q    I  V       
Sbjct: 164 SIRQTRIAINTAEADLGYTRITAPISGTMVSVKV-EEGQTVNAVQTTPAIGQVADLSHML 222

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE---- 385
            + ++    +  VK G   T+ F   AD   ++ +A ++ +DP ++       T      
Sbjct: 223 NKMQIAEGDVTRVKAGQ--TLLFTTLADPDSER-EAKLDSVDPGLTTLSQGSYTTSTDTT 279

Query: 386 ----YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
               YY     + +    D  + +  G   +       
Sbjct: 280 STAIYYYARSLVPNE---DGKLAI--GMTTQNNIVIGE 312


>gi|197302784|ref|ZP_03167837.1| hypothetical protein RUMLAC_01514 [Ruminococcus lactaris ATCC
           29176]
 gi|197298182|gb|EDY32729.1| hypothetical protein RUMLAC_01514 [Ruminococcus lactaris ATCC
           29176]
          Length = 1198

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 74/206 (35%), Gaps = 18/206 (8%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D +    ++ KK  +  +   I    + ++      + +E   +  EE+L+         
Sbjct: 448 DTKILKQVEAKKAQLDEVNAKIAENSAKIEQNKTLLETVESQMDPLEEKLVQMKN----- 502

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
                  G+     +L+     +  I   +  ++   + + + +SS +  L   +   E 
Sbjct: 503 -------GLEQTETALEKISAGLSEIEAGQEQMQTGLTQMESYISSGEFRLQAAREQLES 555

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISRD 265
               +N +   +R +  +   + +   + +  ++ I +         +E+ +  ++ + +
Sbjct: 556 G---KNQILSGQRQIEDAKKRIADGEEQIQAGIKQIQDGETGLADGWIEYQDGERQANAE 612

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT 291
           +   +   AD   +L   +K  EQ  
Sbjct: 613 IADGEAQIADAKVQLADAKKEIEQIE 638



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 73/211 (34%), Gaps = 26/211 (12%)

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            + L    D     +D +  + + ++   E RE+   D +    S         I+    
Sbjct: 220 AEKLTAFTDQYDQRIDSVMKEVEAIK---EEREKARYDEIVTEASEKLADAEKEITDAEA 276

Query: 163 SLKM-KLTRMRSIYLNRLDLENKSSLLRA---LLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            L+  K      +   R  LEN    L      L+S Q  +   K   E+   +Q +LN+
Sbjct: 277 ELEQGKAEAQEKLTAAREKLENAQKELEQAKKELASSQAKIASSKEELEQ---AQKELNE 333

Query: 219 QERIVYKSTLELREN------IHEQKNMLRHINELYDEANLEFA----------NYLKEI 262
               +     EL E       + EQK+ L+      ++   E +            L+E 
Sbjct: 334 SSGKIAAGEKELNEKSIALATLKEQKDTLQGQLAALEQQKEELSGQKTTLEAQKRTLQEG 393

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            ++L   Q     ++S+L   ++    + I 
Sbjct: 394 QKNLLDTQAVLQQQISRLKAEKEDLNAEGIR 424


>gi|6682323|emb|CAB64664.1| catchin protein [Mytilus galloprovincialis]
          Length = 985

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 74/195 (37%), Gaps = 5/195 (2%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   + +   L   ++     ++  N   + LEK   + ++ + ++  K     S++ N 
Sbjct: 455 VSSLEKAKNRLTGELEDLGIDVERANANANSLEKKQRAFDKTIQEWQAKVTDLQSELENA 514

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
              +  RS   +L R ++ Y    + ++    LR    +  +++  +     +   S ++
Sbjct: 515 QKEA--RSYSAELFRCKAQYE---ESQDSVEALRRENKNLAEEIHELTEQLSEGGRSVHE 569

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           + + +R +     EL+  + E ++ L           LE +N   EI R L++    F +
Sbjct: 570 VEKAKRRLEMEKEELQAALEEAESALEQEEAKVMRGQLEISNVRSEIERRLQEKDEEFEN 629

Query: 276 EMSKLTILEKTREQK 290
                     + +  
Sbjct: 630 TRRNHQRALDSMQAS 644


>gi|117925489|ref|YP_866106.1| membrane-fusion protein-like protein [Magnetococcus sp. MC-1]
 gi|117609245|gb|ABK44700.1| membrane-fusion protein-like protein [Magnetococcus sp. MC-1]
          Length = 619

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 59/177 (33%), Gaps = 16/177 (9%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFA---DEMSKLTILEKTREQKTILSPIAGTIV-YNQSF 306
                       +R L + Q   A      ++L ++    +   + +P  G +V      
Sbjct: 438 TRFAREAEKANATRKLAEMQIALAHGQQSEARLALVRYKLQHAELTAPYEGIVVEGELKK 497

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
           +     ++   L+K+   ++  Y+  ++    +  V+ G    V         E++FK  
Sbjct: 498 NLGAPVRKGDLLLKLA-QTQQIYLELEIAQVDVHEVQLGQVGEV---ALVGRPEQRFKIE 553

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           + ++DPI +Q++     +  +    +I     S      R G             L 
Sbjct: 554 VARMDPIATQRE----GRSVFLGRARI----LSPVEKWWRPGMGGSAKIAVGERRLI 602



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 43/143 (30%), Gaps = 1/143 (0%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +PF G ++   VE G ++ QG  L+T +  +      +    +       +   +     
Sbjct: 395 APFDGFLRSVHVEVGDRVAQGQVLVTLDTRDLEQEAAMAAAEVTRFAREAEKANATRKLA 454

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
             +  +           L+ +  ++    +      +    +       R   + L    
Sbjct: 455 EMQIALAHGQQSEARLALVRYKLQHAELTAPYEGIVVEGELKKNLGAPVRKGDLLLKLAQ 514

Query: 181 LENKSSLLR-ALLSSHQKDLTMM 202
            +     L  A +  H+  L  +
Sbjct: 515 TQQIYLELEIAQVDVHEVQLGQV 537


>gi|303257056|ref|ZP_07343070.1| HlyD family secretion protein [Burkholderiales bacterium 1_1_47]
 gi|302860547|gb|EFL83624.1| HlyD family secretion protein [Burkholderiales bacterium 1_1_47]
          Length = 350

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 54/416 (12%), Positives = 116/416 (27%), Gaps = 96/416 (23%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW----SILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  +   P     + L+ ++G+   I W    +   P   +    G++  E   + + S 
Sbjct: 17  QKQEVKAPKISVILMLVFVLGLTAFIVWGIYKAAFPP---APPLQGQM--ESRTISVASK 71

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G I K  V  G  +    P+                 S+  L   +   ++       
Sbjct: 72  VPGRIHKVLVSEGDFVKANQPVALM--------------SLPELEAKLQQVQAQERAAQA 117

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           K  ++++    +E+Q                                             
Sbjct: 118 KQSLVDEGARPQEKQAA------------------------------------------R 135

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +    +A  +   K    +  L++   VS+   ++ +     +                
Sbjct: 136 AQWERAQAAAALALKTYNRISALYKDGLVSKQKYDEVQTQWIAAK-----------QQAD 184

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              ++YD A +      K  + DL +  +    ++  LT+       KT+ +P+   +  
Sbjct: 185 AAKQMYDIAEIGARKQEKSAAFDLAEEAKAGVKQVESLTV------DKTLNAPLDAQVDK 238

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLT----YIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
                    A    P++ +V  +            +   +I  V     A V  P   D 
Sbjct: 239 VILV-EGEIAAAGFPVVTLVDLNDQWASFNIREENMPGIEIGKV---LHAYV--PALGD- 291

Query: 359 REKKFKAIIEKIDPIISQQD-NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             KK    +  I P  +     + +    Y++          +    LR G    V
Sbjct: 292 --KKIDYKVYYISPRANYATWRSTRMDSGYDMKTFEVRARPVEKIDHLRPGMSVLV 345


>gi|56695550|ref|YP_165900.1| multidrug resistance efflux pump, putative [Ruegeria pomeroyi
           DSS-3]
 gi|56677287|gb|AAV93953.1| multidrug resistance efflux pump, putative [Ruegeria pomeroyi
           DSS-3]
          Length = 412

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 1/168 (0%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            ++  + +    V I     G +++  VEN   I  G P+L  E +     ++     I 
Sbjct: 63  PATNAVTSYFRTVTILPQVGGRVEEVYVENNQPIEAGQPILRLESLSQQAGVEAAHAGIA 122

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            +        + L   +        A    +E L           S V    I  +   +
Sbjct: 123 QIEASRKLALTDLAMADAGIAQARAALTQAQEDLARNQTLKDQGSSAVRLTEIERLDNLV 182

Query: 165 KMKLTRMRSIYLNRLDLENKSSLL-RALLSSHQKDLTMMKNLFEKNAV 211
             +   +++    +   + +  +L  A ++S Q  L + K    K  V
Sbjct: 183 SEREALLQAAEAGKAAAQQQIEVLIPAQMASAQAQLELAKAELGKTLV 230


>gi|23464771|ref|NP_695374.1| hypothetical protein BL0155 [Bifidobacterium longum NCC2705]
 gi|23325345|gb|AAN24010.1| large transmembrane protein possibly involved in transport
           [Bifidobacterium longum NCC2705]
          Length = 1263

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 77/226 (34%), Gaps = 26/226 (11%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E    ++  K  +   R  +D  ++ L     K +      +    Q+   L       +
Sbjct: 436 EARTQLESGKAQLTLARKQLDAAQTELTANRTKIEQGITQIDQGVAQIDQMLSMIQQANN 495

Query: 151 KVFN------------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH-QK 197
            +                I  +   L + +  + SI   R  L  K + L+A   S  Q+
Sbjct: 496 LLAQLDPNIDLNSPTWQAIKQLLARLGITVPEVPSISDLRQQLTAKQTELQAQRDSLVQQ 555

Query: 198 DLTMMKNLFEKNAVSQNDLNQQ-------ERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + + L E  A +Q+ L+QQ       E+      ++L     E +     +     +
Sbjct: 556 KADLQRTLNETIAPAQSTLDQQNAQLTAKEQEAAAGEVQLNTKSAELEANAATLETQSAQ 615

Query: 251 ANLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              + A        L++  R L++ ++  AD  +KL   +   + K
Sbjct: 616 LEAQAAQLASGKQQLEKGERQLKEGEQQLADGKAKLDDAQSELDAK 661


>gi|261753464|ref|ZP_05997173.1| HlyD family secretion protein [Brucella suis bv. 3 str. 686]
 gi|261743217|gb|EEY31143.1| HlyD family secretion protein [Brucella suis bv. 3 str. 686]
          Length = 243

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 80/216 (37%), Gaps = 15/216 (6%)

Query: 19  RMTLLSIIGIIG--LITWSI-LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           R     +IG++G  +I W+  L P + SV ++        V  +    SG I K  V + 
Sbjct: 13  RGGFAILIGLLGVFIILWAWQLPPFKHSVETTDNAYVRGQVTVMSPQVSGYITKVNVTDY 72

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            Q+ +G  L   +           +  +      +D++K+AL          E   ++RE
Sbjct: 73  EQVKKGDLLFEIDS-------RSYQQKLDQALAALDSKKAALANSEQSQRSAEATIKARE 125

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            Q+           +K     + ++        +   + + N L  +       A L+  
Sbjct: 126 AQISGAKAALE--VAKANTVRVDALLPRGVTTQSSADTAHGNMLQAQAAVDQAEAALAVA 183

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           ++DL  +  +  +      DL+  E  V  + ++L+
Sbjct: 184 KEDLRTII-VAREGL--NADLHNAEAAVALARIDLQ 216


>gi|153951952|ref|YP_001398157.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939398|gb|ABS44139.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 390

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 65/136 (47%), Gaps = 3/136 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  ++ + G++  +D V ++ +  SG I K  V+ G+ + QG  +   +  +  + +D+ 
Sbjct: 42  ISQTIEAVGKVYAKDQV-DVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDIT 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +++ + +++++K AL+  + +Y   +K +  +   L +   + ++    +    ++ 
Sbjct: 101 KAQLESAKANLESKKVALEIASKQYQREQKLYAVKASSLENLETQKNNYY--ILKANVAE 158

Query: 160 VYRSLKMKLTRMRSIY 175
           +   +      +++  
Sbjct: 159 LNAQVVQLEITLKNAQ 174



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 57/167 (34%), Gaps = 6/167 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q +  +      K  LE+    ++++  L  +     E      N    +  ++ +   
Sbjct: 102 AQLESAKANLESKKVALEIASKQYQREQKLYAVKASSLENLETQKNNYYILKANVAELNA 161

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHSKLTY 329
                   L   +K     TI +P+ G ++             +Q    IV   +     
Sbjct: 162 QVVQLEITLKNAQKDLGYTTITAPMDGVVINVAVD-EGQTVNANQNTPTIVRIANLDEME 220

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           +R ++    +  +K G    + F    D  +K + A I  IDP  ++
Sbjct: 221 VRMEIAEADVSKIKVG--TELDFSLLND-PQKTYHAKIASIDPADTE 264


>gi|188993143|ref|YP_001905153.1| putative protein kinase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|14090404|gb|AAK53480.1|AF204145_21 putative kinase [Xanthomonas campestris pv. campestris]
 gi|167734903|emb|CAP53115.1| putative protein kinase [Xanthomonas campestris pv. campestris]
          Length = 762

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 72/203 (35%), Gaps = 6/203 (2%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E      LI+  +V  +  +  + T +   +  +N+Y  LEK     +E   D   + 
Sbjct: 484 RVELAARASLIERLQVGAQQAQDKLATLQLEAETADNRYRDLEKVSSELQEWAKDLEKRT 543

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                         + + +  +      +      LE++    + +    +     +  L
Sbjct: 544 AEA-----EDREKQLNKGMADREAENARLVSQISVLESELEERQRVRELSELLAADLSRL 598

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            E+    Q  +++ ER+  +    + E   +  ++++ +N     A    A  +KE+  D
Sbjct: 599 VEERDGMQVSMSEMERVNTQQQSTIDELQAKIVSLVQRVNRSET-AGAADARRVKELQLD 657

Query: 266 LEQNQRTFADEMSKLTILEKTRE 288
           L    +   D  S++  LE   +
Sbjct: 658 LSHRLQALEDARSRIRELELAVD 680


>gi|302847893|ref|XP_002955480.1| hypothetical protein VOLCADRAFT_96367 [Volvox carteri f.
           nagariensis]
 gi|300259322|gb|EFJ43551.1| hypothetical protein VOLCADRAFT_96367 [Volvox carteri f.
           nagariensis]
          Length = 979

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 71/196 (36%), Gaps = 4/196 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           LI   +  ++ L+  ++ E+   +    K   L +    RE++L + L +  +   K   
Sbjct: 170 LIQDLQQGVQRLKERLEQERRDAE----KEQQLLRTRLEREQELREGLERQCAENRKQLQ 225

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               S   +L     ++    L        +  L   L++ +K         ++ + + +
Sbjct: 226 DDHQSHIAALAQLSRQLSDRMLELQQTNETARRLHEQLAATEKRYKDKALELQQASDTIS 285

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            L +Q     K        I E ++ L   ++   +        +  +   LEQ QR   
Sbjct: 286 QLEEQLVAAEKRAAARDTRITELESTLERNSKKLCQQANSRDAAVAGLQEQLEQRQRKLE 345

Query: 275 DEMSKLTILEKTREQK 290
            + +++   +++  ++
Sbjct: 346 QKEAEIREAQESYSRQ 361



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 65/198 (32%), Gaps = 7/198 (3%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             + NL   + T  + L     +          ++EQLL  + +  +    +       V
Sbjct: 119 AQVANLASELQTCCAELKTAEQRLARAANDKTLQDEQLLQEVQRRRTADVVLIQDLQQGV 178

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD-LTMMKNLFEKNAVSQNDLNQQ 219
            R  +      R     +  L  +    + L    ++      K L + +      L Q 
Sbjct: 179 QRLKERLEQERRDAEKEQQLLRTRLEREQELREGLERQCAENRKQLQDDHQSHIAALAQL 238

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEAN------LEFANYLKEISRDLEQNQRTF 273
            R +    LEL++     + +   +               + ++ + ++   L   ++  
Sbjct: 239 SRQLSDRMLELQQTNETARRLHEQLAATEKRYKDKALELQQASDTISQLEEQLVAAEKRA 298

Query: 274 ADEMSKLTILEKTREQKT 291
           A   +++T LE T E+ +
Sbjct: 299 AARDTRITELESTLERNS 316


>gi|229520652|ref|ZP_04410075.1| hypothetical protein VIF_001177 [Vibrio cholerae TM 11079-80]
 gi|229342207|gb|EEO07202.1| hypothetical protein VIF_001177 [Vibrio cholerae TM 11079-80]
          Length = 350

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 54/167 (32%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L   +  +    ++  ++ +KN        K+  D     
Sbjct: 63  SGRLTDIAVKEGDQVKKGQLLANLDSRDAKTALEAAQLELKNTEQEYRRAKAIFDKTQAI 122

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       G+ S          +   + +   
Sbjct: 123 SKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQ 182

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +    +          +   + + E +A+     + Q R     
Sbjct: 183 DLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLQLRTYSTQ 229



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 63/205 (30%), Gaps = 25/205 (12%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + +    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 76  QVKKGQLLANLDSRDAKTALEAAQLELKNTEQEYRRAKAIFDKTQAISKAELDKVTNRYD 135

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I +P  G I      + +   Q +Q +M I+       +  ++
Sbjct: 136 LAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQV-QANQVIM-ILQDLNDLEVAIEI 193

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-----YEV 389
                          V          +    +    +     Q     TQ       Y V
Sbjct: 194 ------------PHRVMLS--GVRNTRAIAELSAIPNQQFDLQLRTYSTQPSSDSQTYSV 239

Query: 390 ILKITDLAFSDNNIELRNGFPAEVL 414
           +L   DL        +  G  A+V+
Sbjct: 240 VLGFEDL----KGFRVMPGMSAKVI 260


>gi|228312097|pdb|3FPP|A Chain A, Crystal Structure Of E.Coli Maca
 gi|228312098|pdb|3FPP|B Chain B, Crystal Structure Of E.Coli Maca
          Length = 341

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 81  LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRN 140

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 141 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSAMLVKAQV 199

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 200 SEADVIHLKPGQKAW--FTVLGDQLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 252

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 253 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 291



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 16  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 74

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 75  EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNA--ATEMAVKQAQIGT 132

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 133 IDAQIKRNQASLDTAKTN 150


>gi|170698071|ref|ZP_02889152.1| ABC antibiotic efflux pump, membrane fusion protein, HlyD subfamily
           [Burkholderia ambifaria IOP40-10]
 gi|170137032|gb|EDT05279.1| ABC antibiotic efflux pump, membrane fusion protein, HlyD subfamily
           [Burkholderia ambifaria IOP40-10]
          Length = 203

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 63/187 (33%), Gaps = 1/187 (0%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKS 61
            H +   +    P     M  ++    + ++ + +          +G++L    ++ +  
Sbjct: 15  RHKLMGTVSLYSPPWRWLMIGVATALTLVVVAFFVFGSYTKRERVTGQLLPATGLLTVAP 74

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           P +G +   +V  G  +  G  LL       T+L   ++   + LR      ++ L   +
Sbjct: 75  PLTGTVVATRVREGQTVAAGAELLAISAEVATELGGTRETVARQLRFQRSRLETDLTSQS 134

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
                 ++   +R   L D L +     ++          R L    +     Y +   +
Sbjct: 135 QLSGEAQRGLRTRAAALDDQLTQIARQNAQRLRQA-ELAQRQLDKLQSMRELGYASNSQV 193

Query: 182 ENKSSLL 188
           E +  +L
Sbjct: 194 EQQEGVL 200


>gi|220919335|ref|YP_002494639.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219957189|gb|ACL67573.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 526

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 64/164 (39%), Gaps = 16/164 (9%)

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           + L E +R   Q       E+ KL    K  +  T  SPI+G +V               
Sbjct: 266 DALVEAARRKLQLWDVPPAEIRKLEETGKPTKTLTFYSPISGVVVKKDVV-EGMKLDAGA 324

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
              +IV      ++ A V  +++++VK G  AT+    + D     FK  +  IDP++  
Sbjct: 325 MPYEIV-DLSQVWVLADVYERELRNVKVGLPATLTLNAFPDH---PFKGKVSFIDPLLDP 380

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +           V +++   AF++   ELR     EV+   K  
Sbjct: 381 KTRT--------VKVRL---AFANPTGELRPEMFGEVVLQGKAR 413


>gi|157147644|ref|YP_001454963.1| hypothetical protein CKO_03447 [Citrobacter koseri ATCC BAA-895]
 gi|157084849|gb|ABV14527.1| hypothetical protein CKO_03447 [Citrobacter koseri ATCC BAA-895]
          Length = 355

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 73/217 (33%), Gaps = 24/217 (11%)

Query: 17  LKRMTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
             R   +SI   + +  W I+     P+    +    +    + V      SG +    V
Sbjct: 8   FARWVRVSIAAFLAIFAWFIVADIWIPLTPDSTVMRVVTPVSSRV------SGYVSHVYV 61

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            N SQ+ +G  L   +     + ++     I   +  +  ++      + + ++    + 
Sbjct: 62  RNNSQVKKGDLLYELDPTPFINKVE--AAQIAFEQAKLSNQQLDAQIASARANLRTAQYT 119

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSV-------YRSLKMKLTRMRSIYLNRLDLENKS 185
           +R ++L     +  S    V    +  V        +S+      ++++ + R + ++  
Sbjct: 120 ARNDKLTLDRYQRLSAMQNVSQSDLDKVRTTWQTSEQSVAALNASIQNLLIQRGERDDSR 179

Query: 186 ----SLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLN 217
                  R  L   Q +L   K   E    VS   LN
Sbjct: 180 NVTLQKYRNALEEAQLNLGWTKVRAETDGTVSNLQLN 216



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 74/246 (30%), Gaps = 36/246 (14%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD-------LTMMKN 204
           ++    +     ++          L+   L+ + +  RA L + Q         L   + 
Sbjct: 73  LYELDPTPFINKVEAAQIAFEQAKLSNQQLDAQIASARANLRTAQYTARNDKLTLDRYQR 132

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L     VSQ+DL++       S   +       +N+L    E  D  N+    Y      
Sbjct: 133 LSAMQNVSQSDLDKVRTTWQTSEQSVAALNASIQNLLIQRGERDDSRNVTLQKYR----- 187

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
                        + L   +       + +   GT+   Q      YA  + PLM +V +
Sbjct: 188 -------------NALEEAQLNLGWTKVRAETDGTVSNLQLN-PGLYATAATPLMALVSN 233

Query: 325 SKLTYIR--------AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
                           +V       V       V FP +    +    A  E ++  +SQ
Sbjct: 234 QTDIVADFREKSLRHTRV-NTDAAVVFDAMPGKV-FPAHVTSSDAGILAGQEAVNGQLSQ 291

Query: 377 QDNNLQ 382
            + + +
Sbjct: 292 PEQSTR 297


>gi|152993014|ref|YP_001358735.1| hypothetical protein SUN_1427 [Sulfurovum sp. NBC37-1]
 gi|151424875|dbj|BAF72378.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 336

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 6/135 (4%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            E+   S +++ + E +    T +L  NI+  K  L ++ + +      +      I   
Sbjct: 81  VEQIVKSGSEVKKGEIVATLDTTDLTANINALKISLDNLLKSHKRTKALYRVKGASI-EQ 139

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           L++ Q   A   +KL   E      TI +PI G +      +  +     +PL++I   +
Sbjct: 140 LQKEQSQIASIKAKLKSAENQLSYATITAPIDGIVAK-TMAAVGDVTMPGKPLVQISAET 198

Query: 326 K-LTYIRAKVTPKQI 339
                +R   TP+ I
Sbjct: 199 GFSLLVR---TPQDI 210



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 5/102 (4%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +++  V++GS++ +G  + T +  + T  I+  K+S+ NL       K+         +
Sbjct: 80  RVEQI-VKSGSEVKKGEIVATLDTTDLTANINALKISLDNLLKSHKRTKALYRVKGASIE 138

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            L+K     + Q+     K  S  +++    I++    +  K
Sbjct: 139 QLQKE----QSQIASIKAKLKSAENQLSYATITAPIDGIVAK 176


>gi|152972163|ref|YP_001337309.1| p-hydroxybenzoic acid efflux subunit AaeA [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|150957012|gb|ABR79042.1| putative membrane located multidrug resistance protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
          Length = 296

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 72/222 (32%), Gaps = 21/222 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q    +            +    E++      N+L  +A       + + +  L+  
Sbjct: 63  VIDQPRYQKALAQAEADVAYYQTLAQEKRVEAGRRNKLGVQAMSR--EEIDQANNVLQTV 120

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   A  ++   +     E+  I +P  G +     ++   +  +    + +V  +   Y
Sbjct: 121 EHQLAKAVASRDLARLDLERTVIRAPADGWVTNLNVYT-GEFITRGSTAVALVKEN-TFY 178

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A +   +++ V+ GY A +        +    K  ++ I   ++   ++  ++    V
Sbjct: 179 VMAYLEETKLEGVRPGYRAEI--TPLGSSKT--IKGTVDSIAAGVTNASSSSDSKGMASV 234

Query: 390 -----------ILKITDLAFSDNNIELRN-GFPAEVLFTAKN 419
                       + +  +        L   G  A V+ T + 
Sbjct: 235 DSNLEWVRLAQRVPV-RIRLDHQQGNLWPSGTTATVVITGQE 275



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 45/141 (31%), Gaps = 5/141 (3%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           M L+ +  +     W        +   + +     ++V I    SG+I +  V++   + 
Sbjct: 1   MILVILAFVAIFRAWVYYT----ASPWTRDARFSADIVAIAPDVSGLISQVNVKDNQLVK 56

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +   L   +       +   +  +   +  +  EK       NK  V   + E  ++   
Sbjct: 57  KDQVLFVIDQPRYQKALAQAEADVAYYQT-LAQEKRVEAGRRNKLGVQAMSREEIDQANN 115

Query: 140 DFLGKYHSTCSKVFNYGISSV 160
                 H     V +  ++ +
Sbjct: 116 VLQTVEHQLAKAVASRDLARL 136


>gi|172065482|ref|YP_001816194.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
 gi|171997724|gb|ACB68641.1| secretion protein HlyD family protein [Burkholderia ambifaria
           MC40-6]
          Length = 357

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 65/198 (32%), Gaps = 8/198 (4%)

Query: 11  RNHPASLKRMTLLSIIGI-IGLITWSIL--LPIEIS-VSSSGEILNEDNVVEIKSPFSGI 66
           +  P  L      +++ I +    W+       +   VS +G I   +  V  K P  G 
Sbjct: 2   KTIPRPLLIGIGAAVLAIGVAYYGWARWRDGQTDAGLVSGNGRIEATEIDVATKLP--GR 59

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+ G  +  G PL   + +     +D  +   +    +  + ++ +    +    
Sbjct: 60  VTAMLVDEGDFVTAGQPLARMDVVVLQAQLDEAQAREQQAVNNAASIEAQVAQRRSDKTA 119

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                  RE +L     +     S+  +   +S  + L     R  S+         +  
Sbjct: 120 AAAVVVQRESELDAATRRL--ARSETLSRDGASSMQELDDDRARAGSLRATVNAARAQVE 177

Query: 187 LLRALLSSHQKDLTMMKN 204
             +A + + +  L   ++
Sbjct: 178 AAQAAVDATRAQLVAARS 195



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/297 (10%), Positives = 80/297 (26%), Gaps = 11/297 (3%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +      R   +L   G + +    +    +  +   L     R +    N   +E + +
Sbjct: 52  VATKLPGRVTAMLVDEGDFVTAGQPLARMDVVVLQAQLDEAQAREQQAVNNAASIEAQVA 111

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             R+  ++    +   ++  +             R    S  EL ++     ++   +N 
Sbjct: 112 QRRSDKTAAAAVVVQRESELDAATRRLARSETLSRDGASSMQELDDDRARAGSLRATVNA 171

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +     A         L   +       + +  +        + SP  G + Y +  
Sbjct: 172 ARAQVEAAQAAVDA-TRAQLVAARSAVTAAQATVARVRADISDSELTSPRDGRVQY-RIA 229

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
            S         ++ +V  S   Y+   +    +  V  G    +         E    A 
Sbjct: 230 ESGEVLPAGGKVLNVVDLSD-VYMTFFLPEAVVGRVPLGADVRIVLDA---APEYVIPAR 285

Query: 367 IEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +  +         + +    + +  + V  +I       +   ++ G P        
Sbjct: 286 VSYVSSTAQFTPKTVETATERQKLMFRVKARIDRDLLQRHLKLVKTGLPGVAWLKTD 342


>gi|73856075|gb|AAZ88782.1| putative membrane protein [Shigella sonnei Ss046]
          Length = 462

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I+   N V ++S   G +     + G Q+  G  L   +  
Sbjct: 111 AATA-VEQAVPRYLTGLGTIIAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 168

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 169 QFKVALAQTQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 224

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 225 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 257



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 67/239 (28%), Gaps = 60/239 (25%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 169 QFKVALAQTQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 228

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +     +                                                +   I
Sbjct: 229 DEASVASAQLQ-------------------------------------------LDWSRI 245

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQP--LMKIV---PHSKLTYIRAKVTPKQIQHVKKGYT 347
            +P+ G +   +     N         ++ I    P          +    I  V +   
Sbjct: 246 TAPVDGRV-GLKQVDVGNQISSGDTTGIVVITQTHPID--LVFT--LPESDIATVVQAQK 300

Query: 348 A--TVRFPHYADIREKKF-KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           A  T+    +     KK  +  +  +D  I      ++     +      D A   N  
Sbjct: 301 AGKTLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIKV----KARFNNQDDALFPNQF 355


>gi|88858260|ref|ZP_01132902.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           tunicata D2]
 gi|88819877|gb|EAR29690.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           tunicata D2]
          Length = 363

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 57/159 (35%), Gaps = 8/159 (5%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
              +L E I   K +++   E   +   +      +    L + +   A   ++L  L  
Sbjct: 110 EQGDLSERIESVKALIKQ-REFEYQGAKKLQQQGLQDQVALAKTETALAQAKAELAGLAL 168

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           + E+ T+ +P AG I   +     +Y  +   + ++        IRA VT  +++++   
Sbjct: 169 SLERTTLSAPFAGVINR-RLVEVGDYVGRGDAVFELA-DLDPLIIRADVTQAEVKNLTIN 226

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
              T     +        + +I  I  +     N  + +
Sbjct: 227 QQVTA--DVFEQSST---QGLIRYIASVADSNTNTFRIE 260



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 4/147 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S   G ++   V  G  + +GT +   E       +  +  S+K L    + E     
Sbjct: 81  VSSYEVGQVEAIFVNEGEFVTKGTVVAQLE----QGDLSERIESVKALIKQREFEYQGAK 136

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L  +    + A    E  L     +       +    +S+ +  +  +       Y+ R
Sbjct: 137 KLQQQGLQDQVALAKTETALAQAKAELAGLALSLERTTLSAPFAGVINRRLVEVGDYVGR 196

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNL 205
            D   + + L  L+         +KNL
Sbjct: 197 GDAVFELADLDPLIIRADVTQAEVKNL 223


>gi|197301751|ref|ZP_03166821.1| hypothetical protein RUMLAC_00477 [Ruminococcus lactaris ATCC
           29176]
 gi|197299191|gb|EDY33721.1| hypothetical protein RUMLAC_00477 [Ruminococcus lactaris ATCC
           29176]
          Length = 441

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 69/213 (32%), Gaps = 29/213 (13%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           +    + +  LEL +  +   N+   I  L  E     A+     +  +++ Q     E 
Sbjct: 109 ELAMTLEQRNLELDKINNSISNLNNQIATLTAEKKNAPASEQLSYTTQIQELQTNVKQEE 168

Query: 278 SKLTILEKTREQ-------KTILSPIAGTIVYNQSFSSSN---YAQQSQPLMKIVPHSKL 327
               + E    +         + S I+G +                + +P M I+  +  
Sbjct: 169 YNYKVKELEVNRMKKNLESSVVTSTISGIVQE--INEEQGYDDVTGEKKPFMSIL-STGK 225

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII------------S 375
             I+ K++ + I ++  G   T+R         + +K  ++ ID               S
Sbjct: 226 YRIKGKISEQNIGNLSPGMEVTIRS---RVDETQIWKGTVDSIDTEKPESGSQNSYYSGS 282

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
                     +Y V L+ ++      ++ +  G
Sbjct: 283 DSSQQATKYPFY-VTLEKSEGLMLGQHVYVEPG 314


>gi|154253878|ref|YP_001414702.1| secretion protein HlyD family protein [Parvibaculum lavamentivorans
           DS-1]
 gi|154157828|gb|ABS65045.1| secretion protein HlyD family protein [Parvibaculum lavamentivorans
           DS-1]
          Length = 359

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 48/158 (30%), Gaps = 2/158 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+   V  G  +  G PL   +        D      +     +   ++ +       
Sbjct: 60  GRIEDILVREGDFVAAGQPLARMQLETLEAQRDEAFAMREQAEHSVTAAQAQVALREADV 119

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +     RE +L     +     S+  +   ++  + L     R+R         + +
Sbjct: 120 VAAQALVGQRESELDAAQRRLK--RSQTLSQEGAASIQELDDDRARVRGAQATLAASKAQ 177

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           ++  RA + + +  L   ++       S N +    R 
Sbjct: 178 TAAARAAVEAAKAQLVGARSSVSAATASINRIEADIRD 215


>gi|333024186|ref|ZP_08452250.1| putative chromosome segregation protein [Streptomyces sp. Tu6071]
 gi|332744038|gb|EGJ74479.1| putative chromosome segregation protein [Streptomyces sp. Tu6071]
          Length = 1287

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 74/219 (33%), Gaps = 10/219 (4%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           LL+ + +     +D +      L+   +  +SAL     +   LE+A  +   +L     
Sbjct: 224 LLSDDLVTLRRALDAEVADEAALKARKEAAESALKTALAREARLEEAVRALAPRLQSAQH 283

Query: 144 KYHSTCSKVFNYG----ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
            ++              ++    +    +        +  DLE +++ +R   +   + L
Sbjct: 284 TWYELSRLAERVRGTVSLAEARVTSATSVPAEERRGRDPEDLEREAARIREQEAELSEAL 343

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              +   E     + +L +Q  +  +   ++   + +++  L  +      A     +  
Sbjct: 344 EAAERALEDTVAHRGELERQLAVEERRLRDVSRALADRREGLARLQGQVTAARGRATSAR 403

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            EI R       +  +   +  +  +  E+  + + + G
Sbjct: 404 AEIER----LATSRDEARERADVAHEEYER--LRAEVDG 436



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 76/253 (30%), Gaps = 26/253 (10%)

Query: 63  FSGIIKKFQVENG----SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
            SGI ++  V  G      +L   P+     IE    +   +   +     +D  ++ L 
Sbjct: 125 DSGIGREMHVIVGQGQLDSVLHADPMGRRAFIEEASGVLKHRKRKEKALRKLDAMRANLA 184

Query: 119 FLNNKYDVLEKAFESREEQLLDF------LGKYHSTCSKVFNYGISSVYRSLKMKLT--- 169
            + +  D L +  +    Q                   ++ +  + ++ R+L  ++    
Sbjct: 185 RVQDLTDELRRQLKPLGRQAAVARRAAVIQADLRDARLRLLSDDLVTLRRALDAEVADEA 244

Query: 170 -----------RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                       +++       LE     L   L S Q     +  L E+  V       
Sbjct: 245 ALKARKEAAESALKTALAREARLEEAVRALAPRLQSAQHTWYELSRLAER--VRGTVSLA 302

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           + R+   +++   E        L        E   E +  L+   R LE       +   
Sbjct: 303 EARVTSATSVPAEERRGRDPEDLEREAARIREQEAELSEALEAAERALEDTVAHRGELER 362

Query: 279 KLTILEKTREQKT 291
           +L + E+     +
Sbjct: 363 QLAVEERRLRDVS 375


>gi|320654167|gb|EFX22235.1| macrolide transporter subunit MacA [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
          Length = 371

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++   L D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|307564661|ref|ZP_07627191.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella amnii CRIS 21A-A]
 gi|307346589|gb|EFN91896.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella amnii CRIS 21A-A]
          Length = 327

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 76/207 (36%), Gaps = 12/207 (5%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           KN  +     L  +  ++++   GLI +  +   +  +   GE+  E+  V  K P  G 
Sbjct: 2   KNKSQKSNILLAVLGFIAVVVAAGLIGYFTMSKPKEII--QGEVEVEEYRVACKLP--GR 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I   +V+ G  + +G  L      E      + + +            S L     + + 
Sbjct: 58  ITSIKVKEGDFVHKGDVLAVLAIPEAKAQEKVVEATADATSA-----LSDLASAPTRKEA 112

Query: 127 LEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++ AF+  ++ +   D   K +    +++  G+ +  +     L   ++        ++ 
Sbjct: 113 IDAAFQVYQQAIAARDIAEKTYGRMQRLYEEGVMTAQKK-DEALAAFQTTKAGVEVAKSN 171

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAV 211
             LL++      K+    +    K+AV
Sbjct: 172 LELLKSGARKQAKEAAKKQAQVAKSAV 198


>gi|257461382|ref|ZP_05626478.1| auxiliary transport protein, membrane fusion protein family
           [Campylobacter gracilis RM3268]
 gi|257441105|gb|EEV16252.1| auxiliary transport protein, membrane fusion protein family
           [Campylobacter gracilis RM3268]
          Length = 393

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 58/190 (30%), Gaps = 13/190 (6%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +  +++        ++  + +   + A + S  ++  + +         +  L   E  +
Sbjct: 62  VGAQVSGQIKKLYVKVGDKVQKGDMIAQIDSVTQENEIAQQ--------KAQLLIHEANL 113

Query: 224 YKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             + +       +    L     N    EA     N       + +Q +        +L+
Sbjct: 114 ASAKIAAANAKTQYNRELELYKRNAASKEAVENAKNSAALKEAEQKQIEAQIEQTKLQLS 173

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQI 339
             E       I +PI+GTIV             +Q    IV  +      I+ ++    I
Sbjct: 174 TAETNFGYTKITAPISGTIVSMPV-EEGKTVNSNQTTPTIVKIADLSKMEIKMQIAEGDI 232

Query: 340 QHVKKGYTAT 349
             VK G    
Sbjct: 233 SKVKVGMDVE 242



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +V+++GE+    ++V++ +  SG IKK  V+ G ++ +G  +   + +   + I  +
Sbjct: 44  IRGTVTAAGEV-YARDLVDVGAQVSGQIKKLYVKVGDKVQKGDMIAQIDSVTQENEIAQQ 102

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDV-LEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           K  +     ++ + K A      +Y+  LE    +   +      K  +   +     I 
Sbjct: 103 KAQLLIHEANLASAKIAAANAKTQYNRELELYKRNAASKEAVENAKNSAALKEAEQKQIE 162

Query: 159 SVYRSLKMKLT 169
           +     K++L+
Sbjct: 163 AQIEQTKLQLS 173


>gi|226330868|ref|ZP_03806386.1| hypothetical protein PROPEN_04789 [Proteus penneri ATCC 35198]
 gi|225201663|gb|EEG84017.1| hypothetical protein PROPEN_04789 [Proteus penneri ATCC 35198]
          Length = 254

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 87/262 (33%), Gaps = 34/262 (12%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
              S   +L +     RS  + +   ++  SL +A            ++L  +  +S N 
Sbjct: 15  ERDSAIAALALMEAGYRSEEIAQA--QSDVSLKQAAWQYANNFYKRQQDLANRKVISAN- 71

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                        EL    + +      +    D+ N     Y KE   D++  +     
Sbjct: 72  -------------ELDSARNNRNQAAAALKAAQDKLNQYQNGYRKE---DIDAAKGQVMQ 115

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             + +   E   +   ++SP  GT++  ++           P+   V  +   ++RA ++
Sbjct: 116 AKAAVAQAELNLQDTQLISPSQGTVLT-RAVEPGTILSAGSPVFT-VSLTNPVWVRAYIS 173

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVI 390
              +          +   +    ++K +   I  + P       S +   L+T   Y + 
Sbjct: 174 ETHLNEAIPNREVYL---YTDGRKDKPYHGTIGFVSPTAEFTPKSVETPELRTDLVYRLR 230

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
           + +TD      + ELR G P  
Sbjct: 231 VVVTDA-----DDELRQGMPVT 247


>gi|254458329|ref|ZP_05071755.1| efflux transporter, RND family, MFP subunit [Campylobacterales
           bacterium GD 1]
 gi|207085165|gb|EDZ62451.1| efflux transporter, RND family, MFP subunit [Campylobacterales
           bacterium GD 1]
          Length = 348

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +  + N   + S  SG++ K  V+ G  + +GT LL  E       +  K+ ++ +  
Sbjct: 47  GTLYYDRNSK-LASETSGVVSKIYVKEGQSVKEGTVLLKLESSILEAKVKAKQATLDSFL 105

Query: 108 CHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                ++      D L  K  + + ++++    L     +  S  +++ +  I    +S+
Sbjct: 106 AQQTKQQKDLQRADALLKKQSIAQSSYDNTYYTLEALNSEIDSHKAELLSMKIELQKKSI 165

Query: 165 KM 166
           + 
Sbjct: 166 QA 167



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 49/166 (29%), Gaps = 14/166 (8%)

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR--DLEQNQRTFADE 276
            E  V      L   + +Q    + +         +        +    LE         
Sbjct: 90  LEAKVKAKQATLDSFLAQQTKQQKDLQRADALLKKQSIAQSSYDNTYYTLEALNSEIDSH 149

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--V 334
            ++L  ++   ++K+I +P    IV    +    +      +  +V       I A+  +
Sbjct: 150 KAELLSMKIELQKKSIQAPFDAVIVKRDVY-IGEWVAVGNSVFNVV---NPQSIEARVNI 205

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
               ++ +  G     +        +K  +  ++ I P+  +    
Sbjct: 206 PSSLLETLSVGQKLQAKI------NDKDIEVSVKSIIPLADKSSRT 245


>gi|187607231|ref|NP_001120601.1| citron (rho-interacting, serine/threonine kinase 21) [Xenopus
            (Silurana) tropicalis]
 gi|171847291|gb|AAI61636.1| LOC100145758 protein [Xenopus (Silurana) tropicalis]
          Length = 2068

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 3/207 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESREEQLLDFL 142
              +     D +  K+   ++ R  ++ EK+  +    +   L   EK    R +Q     
Sbjct: 1071 VLDLEALNDELLEKERQWESWRSSLEDEKTQFECRLREVQRLLDTEKQSRVRSDQRTTES 1130

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +     +K     I ++ ++LK +  +  S+     DLE K ++L     S Q+ L   
Sbjct: 1131 RQMVELAAKEHKAEILALQQALKDQKLKTESLSDKLNDLEKKHAMLEMNARSLQQKLETE 1190

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            + L ++    Q  L QQ  +       L + + E  +    +     +   +  N     
Sbjct: 1191 RELKQRLLEEQAKLQQQMDLQKNHIFRLTQGLQEALDRADLLKTERSDLEYQLENMQALF 1250

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQ 289
            S +  + + T + +   +  L+   +Q
Sbjct: 1251 SHEKVKMEGTISQQTKLIDFLQAKMDQ 1277



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 69/192 (35%), Gaps = 7/192 (3%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K +++  R   + E    + + ++   +  A ES+   L   L +         N  + +
Sbjct: 784 KEALELSRIKNEEEICEKNRILSEQKAMINALESKITSLEQRLAELSEANKLAANSSLFT 843

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
             R++K +   +  +   +  LE ++  + A     ++ L  + N   ++   +N L + 
Sbjct: 844 -QRNMKAQEEMISELRQQKFYLETQAGKIEAQNQKLEEQLERINN---QDHTDKNRLLEL 899

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF---ANYLKEISRDLEQNQRTFADE 276
           E  + + +LE  E   E K  L  +     E   +     +    +   L Q +    D 
Sbjct: 900 ETRLREISLEHEEQKLELKRQLTEVQLTLQERETQISSLQSARSALESQLHQAKTELEDT 959

Query: 277 MSKLTILEKTRE 288
            ++     +   
Sbjct: 960 TAEAEEEIQVLR 971



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 70/207 (33%), Gaps = 5/207 (2%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESREEQLLDFLGKYH 146
             E  D     +  I+ LR H D  +   D L +   VL   E       ++  D   +  
Sbjct: 954  TELEDTTAEAEEEIQVLRSHRDEIQRKFDTLRDSCTVLTELEDQLNRISQENADLNNQNF 1013

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                ++    +S     +    + +  +     + E + +  +  + + +   TM++   
Sbjct: 1014 YLSKQL--SEVSGATDEIVQLRSEVDHLRREITEREMQLTSQKQTMEALKTTCTMLEEQV 1071

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
                   ++L ++ER        L +   + +  LR +  L D          +  +   
Sbjct: 1072 LDLEALNDELLEKERQWESWRSSLEDEKTQFECRLREVQRLLDTEKQSRVRSDQRTTESR 1131

Query: 267  EQNQRTFADEMSKLTILEKTREQKTIL 293
            +  +    +  +++  L++  + + + 
Sbjct: 1132 QMVELAAKEHKAEILALQQALKDQKLK 1158



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 67/190 (35%), Gaps = 6/190 (3%)

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            ++     +    S ++ + ++ +V  KA E++   L   L  Y + CS +      +  
Sbjct: 469 KMEQEMTRLHRRVSEVEAVLSQKEVELKASETQRSLLEQDLATYITECSSLKRSLEQARM 528

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
              +     ++ +   R        +      +  +++ MM +  E+      DL    R
Sbjct: 529 EVSQEDDKALQLLNDIREQSRKLQDIKEQEFQAQLEEMKMMMHQLEE------DLLAARR 582

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                  ELR++    +   R   E   +      +   E+     + ++  AD+ +K+ 
Sbjct: 583 RSDLYETELRDSRLAAEEFKRKAVECQQKLQKAKDHGKGEVGELHTKLEKVNADQQNKIQ 642

Query: 282 ILEKTREQKT 291
            L++   +  
Sbjct: 643 ELQEKLAKAV 652



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 21/203 (10%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFE----SREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
             H   EK   D  N   ++ EK  +    S E   L    +     ++     + +   
Sbjct: 625 ELHTKLEKVNADQQNKIQELQEKLAKAVKASSEATELLQNIRQAKERAEKELEKLKNRDD 684

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLR-------ALLSSHQKDLTMMKNLFEKNAVSQND 215
           S      ++      R  LEN+   L         L    Q     ++ + EK    +  
Sbjct: 685 SNDAIKKKLLDAEERRHSLENQVRRLETVERRENKLKEDIQTKSEQIQQMAEKIMELEER 744

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHIN----------ELYDEANLEFANYLKEISRD 265
             + +    +  + L++N    +   R+I           E  + + ++    + E +R 
Sbjct: 745 YREAQVGAQRLEVHLKQNEQVYEEKARNIETQMKKDLADKEALELSRIKNEEEICEKNRI 804

Query: 266 LEQNQRTFADEMSKLTILEKTRE 288
           L + +       SK+T LE+   
Sbjct: 805 LSEQKAMINALESKITSLEQRLA 827



 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 69/197 (35%), Gaps = 8/197 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +        +  ++ +     T+K+ L  L  +   +    E ++ +L   L +   T  
Sbjct: 870  KIEAQNQKLEEQLERINNQDHTDKNRLLELETRLREISLEHEEQKLELKRQLTEVQLTLQ 929

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     ISS+  +     +++      + +LE+ ++     +   +     ++  F+   
Sbjct: 930  ER-ETQISSLQSARSALESQLHQA---KTELEDTTAEAEEEIQVLRSHRDEIQRKFDTLR 985

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI---SRDLE 267
             S   L + E  + + + E   +++ Q   L         A  E      E+    R++ 
Sbjct: 986  DSCTVLTELEDQLNRISQE-NADLNNQNFYLSKQLSEVSGATDEIVQLRSEVDHLRREIT 1044

Query: 268  QNQRTFADEMSKLTILE 284
            + +     +   +  L+
Sbjct: 1045 EREMQLTSQKQTMEALK 1061


>gi|114776916|ref|ZP_01451959.1| Secretion protein HlyD [Mariprofundus ferrooxydans PV-1]
 gi|114553002|gb|EAU55433.1| Secretion protein HlyD [Mariprofundus ferrooxydans PV-1]
          Length = 389

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 69/216 (31%), Gaps = 34/216 (15%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           +  LEL +++ +        N     A+L+ A    + SR L + +   A ++   T   
Sbjct: 91  QVLLELDQSLTKAALAQSEANAASARASLDLARANMKRSRALFKKEYVTAQDVDTATQAL 150

Query: 285 KT------------------REQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVP 323
           K                        I SP++G +V  +          S     L KI  
Sbjct: 151 KAAQAQLALAMAQVKRDRINLGYTVIRSPVSGVVVSREVD-VGQTVAASFQTPTLFKIAQ 209

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 I +      I  ++ G  AT     +      +F   + ++    + Q N +  
Sbjct: 210 SLTSMQIDSSFAEADIGGIRAGQQATFTVDAFPGR---EFTGTVRQLRLNPTTQQNVVT- 265

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              Y V++ +     ++++  L  G  A V      
Sbjct: 266 ---YNVVIDV-----NNDDGVLLPGMTAYVSVITAR 293



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +VS++G +     +V + +  SG+++K   +   ++ +G  LL  +   T   +   
Sbjct: 50  LVETVSANGTLNPVT-LVNVGTQVSGVVQKIHADFNDKVKEGQVLLELDQSLTKAALAQS 108

Query: 100 KVSIKNLRCHIDTEKSALDFLNN 122
           + +  + R  +D  ++ +     
Sbjct: 109 EANAASARASLDLARANMKRSRA 131


>gi|118365437|ref|XP_001015939.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila]
 gi|89297706|gb|EAR95694.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila SB210]
          Length = 1379

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 78/198 (39%), Gaps = 7/198 (3%)

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH--STCSKVFNYG 156
           ++     L+  +   +  L+    K++  +K  +  ++Q+ D   K +  S  S+     
Sbjct: 486 QEQQSNQLKAELKQTQEQLNDSQQKFEQADKELKDLKQQIEDEKVKLNDKSQESENLKDQ 545

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           + S    L     ++  I  N  DL+ +++ L+ ++   Q+    ++   ++    Q  +
Sbjct: 546 LKSANEKLNESQQKLEQIQKNFDDLK-QNNDLQKIVDEKQQKCEELERELKELKTQQEQV 604

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             Q + +     E++   ++ +     + +       E  + L +  ++ E N++   + 
Sbjct: 605 TAQVQQLNVEKEEIQTKFNQVEQEKEQLKKQ----EQEKIDLLSQAKQEKENNEQEINNL 660

Query: 277 MSKLTILEKTREQKTILS 294
              +  LEK R    I S
Sbjct: 661 KQTIANLEKERTDIQIQS 678



 Score = 36.5 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 73/197 (37%), Gaps = 9/197 (4%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            T+  D        +  H  T +  ++         ++  E+  ++  + +   +    +
Sbjct: 215 FTENKDDISSQTHIILQHQQTFQQLIEKYVTFLAEQKEKNEAISDEAFNKIKSENGNGVQ 274

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL----TMMKNLFE 207
             N  +  + +  +    +   +     + E K    +  L   Q +L      ++ L E
Sbjct: 275 KTNQRVQDLQQKFEAYQQQFNKLNSESQENETKLQETKKQLEDLQNELGNKNNQIQELNE 334

Query: 208 KNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           ++  SQ ++ +    +  +     EL++N +      ++INE+ ++  L   N   E  +
Sbjct: 335 QHQKSQTEIQKLNEQITSNQQRIEELQKNENILVEKDKNINEIKEQ--LSALNQQIEGFK 392

Query: 265 DLEQNQRTFADEMSKLT 281
           D++    T  +E  KL 
Sbjct: 393 DIQNKLDTKTEEFEKLE 409


>gi|16126331|ref|NP_420895.1| HlyD family secretion protein [Caulobacter crescentus CB15]
 gi|221235111|ref|YP_002517547.1| multidrug resistance efflux pump [Caulobacter crescentus NA1000]
 gi|13423575|gb|AAK24063.1| HlyD family secretion protein [Caulobacter crescentus CB15]
 gi|220964283|gb|ACL95639.1| multidrug resistance efflux pump [Caulobacter crescentus NA1000]
          Length = 334

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 83/309 (26%), Gaps = 41/309 (13%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +  + G+   E  V+++ +   GII++  V+ G  +  G PL   ED +           
Sbjct: 51  AAIAQGKADVEGGVIQVAARRQGIIREVFVQEGDIVKAGQPLAKQEDDD----------- 99

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
                  + T+ ++    + K  +     + R  Q      +  +  + V    + +   
Sbjct: 100 -----ARLATQTASAALASAKAQLALHQVQLRTAQREFNRLQGLAASNYVAAQRLDAARD 154

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            +      + +          + +  R               +  + A   +  +     
Sbjct: 155 QIAQAQANIGTQQAQISVASAQLAQARFNEELTVIRAPADGRIARRQANPGSGASTLNVT 214

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                    + I   + +   I  +     +E           + +  R  A   ++   
Sbjct: 215 AMFDLEPNTQRIARAEIVEADIPNVTIGQEVEIQPEGDPDKTYVGKVLRRAAVFGARKLA 274

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +   ++          +V     +                      +  +V  K    +
Sbjct: 275 SDDPSQRSDER------VVEVVVSADGA----------------PLLVGQRVLVK---FM 309

Query: 343 KKGYTATVR 351
           K G  A V+
Sbjct: 310 KPGQKAGVK 318


>gi|327539814|gb|EGF26417.1| RND family efflux transporter MFP subunit [Rhodopirellula baltica
           WH47]
          Length = 600

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 58/178 (32%), Gaps = 24/178 (13%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKDLTMMK 203
                 + +   + S    L++      SI +   + L  +    RA LS  + + + ++
Sbjct: 106 LAQIEPERYEIAVESAVADLEVAKLNKESIEIRLKESLPAEMESARANLSLAEMEFSRIE 165

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           NL ++NA S+++ +Q   +V      L   +  +                      K+  
Sbjct: 166 NLKQQNAASKSEYDQARNLVQTRLASLSGLLATE----------------------KQTR 203

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            +L+  +         L   ++  E  T+     G I         +      P++ +
Sbjct: 204 AELKSAESQIRRAEQTLRDAQRDLEHTTLYGSYQGQISGVNVV-PGSVVNAGDPVLTL 260


>gi|307544627|ref|YP_003897106.1| efflux transporter RND family, MFP subunit [Halomonas elongata DSM
           2581]
 gi|307216651|emb|CBV41921.1| efflux transporter, RND family, MFP subunit [Halomonas elongata DSM
           2581]
          Length = 425

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 61/209 (29%), Gaps = 25/209 (11%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L + +    ++ L   E + +++    +      + NL      ++    L Q Q     
Sbjct: 148 LVRLDDDEARANLRAAEALRDERQAAVNRLAQLQQRNLGTRADAEDSRAQLRQAQAEVES 207

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             ++L       +   I +P +G +   ++ S          L  +        +  +V 
Sbjct: 208 LQAQL-------DNYQIKAPFSGEV-GFRNISIGTLVSPGDELATLDKID-RMKLDFQVP 258

Query: 336 PKQIQHVKKGYTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
              +  +  G + T     + +   + +   +  ++DP+                     
Sbjct: 259 EVALGSLTPGMSLTATSAAFPEADFQGEIATLGTRVDPVS---------------RSVSI 303

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
                +   +LR G   EV    +     
Sbjct: 304 RALIDNPQRKLRPGMLMEVTIARRQRQAL 332



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 4/93 (4%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I   + E G ++  G  L+  +D E    +     + + LR       + L  L  +   
Sbjct: 131 IASLEFEGGERVDAGDVLVRLDDDEARANLR----AAEALRDERQAAVNRLAQLQQRNLG 186

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
                E    QL     +  S  +++ NY I +
Sbjct: 187 TRADAEDSRAQLRQAQAEVESLQAQLDNYQIKA 219


>gi|118365293|ref|XP_001015867.1| Protein kinase domain containing protein [Tetrahymena thermophila]
 gi|89297634|gb|EAR95622.1| Protein kinase domain containing protein [Tetrahymena thermophila
            SB210]
          Length = 2322

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 73/212 (34%), Gaps = 13/212 (6%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            + L   ++  IK L      +++ L+   +      K+ E  +E L     +     ++ 
Sbjct: 1754 SALQTEQEEKIKKLEAEYKKKQAELEREQSILKEKTKSLEKGQEGLYKRWQQELQEKNEE 1813

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN--- 209
                    Y  LK +  + + +   +   E +S+  R      Q+    +  L  +    
Sbjct: 1814 LKSDYEQKYDELKEEFEK-KQLEFEKKLRERESTKRREFEYRLQEKEEEISRLRAQGDNT 1872

Query: 210  ---AVSQNDLNQQERIVYKSTLELRENIHEQ------KNMLRHINELYDEANLEFANYLK 260
                VS+  + +QE +  +  LE +    +Q      KN +  + +   +   +      
Sbjct: 1873 DQSFVSKQRVAEQEYVQKQKELEEQYRELQQYCQNLEKNQMTSLMQYEQKMEEQIREIQA 1932

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E  +     Q+ F ++  KL    K  +   +
Sbjct: 1933 EYFKKQLDLQKQFNEKQKKLDQKMKNLDDSEL 1964



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 85/230 (36%), Gaps = 42/230 (18%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            ++    +  ++  + + +  ++ +  +L  D++N + + L K F  ++ +  D L + +S
Sbjct: 1534 LQYNKFVQEQQEYLASWQAQVEQKTLSLQEDYINIQKE-LRKEFSKKQTEFEDRLKERNS 1592

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               + F        + L+ K  +   +  +R   E +   L       QK+         
Sbjct: 1593 IKRQEF-------EKILRQKNEQYEELCEHRQRHEEQFQRLEQSYIELQKEH-------- 1637

Query: 208  KNAVSQNDLNQQERIVYKSTLELREN---------------IHEQKNMLRHINELYDEAN 252
                 +   +Q ++       E+  N               + +++++ ++I     +  
Sbjct: 1638 -----KKKYSQLQKQYEDKQKEIEANQKVILEKYSQLEQNSMKQRESIKKNIEFTVQQLQ 1692

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
             E+    K++  + E+ QR F + + +  + +   E       ++G +  
Sbjct: 1693 QEYETKQKDLFSEFEKKQRQFEERIRQKEMEKIENENMD----VSGIMKQ 1738


>gi|288941247|ref|YP_003443487.1| RND family efflux transporter MFP subunit [Allochromatium vinosum
           DSM 180]
 gi|288896619|gb|ADC62455.1| efflux transporter, RND family, MFP subunit [Allochromatium vinosum
           DSM 180]
          Length = 435

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 33/197 (16%)

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
             I+ L        A    + +R+L +      D +S +    + R +  + +P+ G + 
Sbjct: 178 AQIDFLLAREGRSGARIDADKARNLLRLLAVPDDVISAIERDGRPRNRIPVRAPMDGIVT 237

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
             ++     Y  +S   M  V      ++   V   QI  +K    A +R P       +
Sbjct: 238 RIEAR-EGMYVTESTE-MFRVADLSRVWVMVDVYEHQIDWLKPDAPAEIRVPA---RPGR 292

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF------------ 409
            +   ++ + P +      L       V L      F + ++ L+               
Sbjct: 293 TWNGRVDYLYPELDPDTRTL------RVRLV-----FDNPDLSLKPNMFADVEIFGGPKR 341

Query: 410 -----PAEVLFTAKNTT 421
                PAE L      T
Sbjct: 342 DVLKIPAEALIVTGART 358


>gi|322832595|ref|YP_004212622.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
 gi|321167796|gb|ADW73495.1| secretion protein HlyD family protein [Rahnella sp. Y9602]
          Length = 305

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 67/220 (30%), Gaps = 32/220 (14%)

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +  V  +  E+    +E +            + +     ++  S         +   ++
Sbjct: 83  LKLAVLSAQAEVDAKRNEMQMRQDAARRRSQISGVISKEDIQNTSSAAGVAAAEYQGALA 142

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----RAKV 334
            L + +    + TI SP  G + + +     +YA   +  + I+  S    +      K+
Sbjct: 143 ALELAKLNLSRATIHSPADGYVTHLRLR-PGDYANAGETKVAIIDASSFWVVGYFEETKM 201

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ---------- 384
                  +  G TA +    YA          +E I   I   ++   +Q          
Sbjct: 202 Q-----RIHVGSTAKIVLMGYA----PALTGHVESIGRGIDDSNDAPGSQGLPDVESTFS 252

Query: 385 -----EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                +   V + I  L    N +EL  G  A +   A  
Sbjct: 253 WVRLAQRIPVRIHIDHL---PNGVELVAGMTASIAINASK 289



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 46/125 (36%), Gaps = 20/125 (16%)

Query: 20  MTLLSIIGIIGLITWSILLPI----EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           ++ + +  II  + W          +  V +        +VV+I    SG + +  V + 
Sbjct: 15  LSAVMVAAIIAFMLWKHYAQTPWTRDGRVRA--------DVVQITPDVSGPVNRVAVMDN 66

Query: 76  SQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             + +G  L + +        +     +D K+  +  +R      +S +  + +K D+  
Sbjct: 67  QWVNRGDILYSIDPQWLKLAVLSAQAEVDAKRNEM-QMRQDAARRRSQISGVISKEDIQN 125

Query: 129 KAFES 133
            +  +
Sbjct: 126 TSSAA 130


>gi|213971817|ref|ZP_03399920.1| Secretion protein HlyD [Pseudomonas syringae pv. tomato T1]
 gi|301382518|ref|ZP_07230936.1| secretion protein HlyD [Pseudomonas syringae pv. tomato Max13]
 gi|302059045|ref|ZP_07250586.1| secretion protein HlyD [Pseudomonas syringae pv. tomato K40]
 gi|213923432|gb|EEB57024.1| Secretion protein HlyD [Pseudomonas syringae pv. tomato T1]
          Length = 494

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 61/224 (27%), Gaps = 37/224 (16%)

Query: 220 ERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF---AD 275
           ER+   +  + L+ N      ++        E      N   ++     Q  R     A 
Sbjct: 142 ERVYAHAPGDVLKANAALADILVPEWAAAQTEFLAIKHNGDADLLAAARQRLRLTGMPAA 201

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            ++++    K +   T+ SPI+G +      +          L + V      ++   V 
Sbjct: 202 LITQVERSGKVQPNLTLTSPISGVLQELNVRA-GMTVSAGDTLAR-VNGLSSVWLAVAVP 259

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
                 +  G     R P +           +  I P  +     L       V +++  
Sbjct: 260 ESDSGAITVGQAVEARLPAFPGTT---LSGNVSAILPETNPDSRTL------RVRVELP- 309

Query: 396 LAFSDNNIELRNGFPA-----------------EVLFTAKNTTL 422
               + +  LR G  A                 E +       L
Sbjct: 310 ----NPDGRLRPGLTAQVRLNRSTEQSVLWVPSEAVIRTGRRAL 349



 Score = 36.9 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 25/226 (11%), Positives = 65/226 (28%), Gaps = 18/226 (7%)

Query: 49  EILNEDNVV---EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET-----------TD 94
           ++     V     + SP SG++++  V  G  +  G  L     + +           + 
Sbjct: 205 QVERSGKVQPNLTLTSPISGVLQELNVRAGMTVSAGDTLARVNGLSSVWLAVAVPESDSG 264

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            I + +     L     T  S            +        +L +  G+     +    
Sbjct: 265 AITVGQAVEARLPAFPGTTLSGNVSAILPETNPDSRTLRVRVELPNPDGRLRPGLTAQVR 324

Query: 155 YGISSVYRSL-KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              S+    L       +R+     + L   +   R +     ++      +  K   + 
Sbjct: 325 LNRSTEQSVLWVPSEAVIRTGRRALVMLAEDAGRYRPVEVLLGQESDGKTAIV-KGLEAG 383

Query: 214 NDLNQQERIVYKSTLELRENIH--EQKNMLRHINELYDEANLEFAN 257
             +    + +  S   L+  +   ++++        + EA+ +   
Sbjct: 384 QKVVTSGQFLLDSEASLKGIVARTDEESAPSETASSFHEADGQIVE 429


>gi|261404719|ref|YP_003240960.1| RND family efflux transporter MFP subunit [Paenibacillus sp.
           Y412MC10]
 gi|329929454|ref|ZP_08283188.1| efflux transporter, RND family, MFP subunit [Paenibacillus sp.
           HGF5]
 gi|261281182|gb|ACX63153.1| efflux transporter, RND family, MFP subunit [Paenibacillus sp.
           Y412MC10]
 gi|328936342|gb|EGG32789.1| efflux transporter, RND family, MFP subunit [Paenibacillus sp.
           HGF5]
          Length = 362

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 84/226 (37%), Gaps = 12/226 (5%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           ++EN   + +       +   + + L +K A  Q    +QE   +    +L         
Sbjct: 81  NVENGQQIKKGDALFKLEQKAIRQQLQQKEAELQKRKLEQELKEFTLNQDLDNAPVGATE 140

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
             R +  L D+ N   ++ L E++ D+         E   L  L     Q T +SP AG 
Sbjct: 141 AER-LKMLADQENARLSSQLDEVNNDI---------ERQTLADLNDRLRQSTYVSPAAGL 190

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
            +++ +         +Q + KIV    L  + A V    I  ++      V+ P   D++
Sbjct: 191 FLFDPTQQRPQSVTANQYIGKIVDLDSLRLV-AYVGENDIFSIQPDMAVEVKLPSIKDLK 249

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
            K     + K     +Q+    QT ++ +VI+ +         + L
Sbjct: 250 LKGKVLEVAKFAEATAQEKQTSQTPQF-KVIISLPKNDRLIGGLTL 294



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 37/104 (35%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           ++ + VENG QI +G  L   E       +  K+  ++  +   + ++  L+   +   V
Sbjct: 77  VESWNVENGQQIKKGDALFKLEQKAIRQQLQQKEAELQKRKLEQELKEFTLNQDLDNAPV 136

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                E  +        +  S   +V N         L  +L +
Sbjct: 137 GATEAERLKMLADQENARLSSQLDEVNNDIERQTLADLNDRLRQ 180


>gi|152992149|ref|YP_001357870.1| acriflavin resistance AcrA/AcrE family protein [Sulfurovum sp.
           NBC37-1]
 gi|151424010|dbj|BAF71513.1| acriflavin resistance protein, AcrA/AcrE family [Sulfurovum sp.
           NBC37-1]
          Length = 264

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 87/246 (35%), Gaps = 24/246 (9%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           ++++ ++  D+  K  LL  + S   +      +L    A     +N+ +       L  
Sbjct: 43  IKNMAVSEGDIVKKGQLLYEIDSKEIEAAERQVDLAISQARLALQMNKNQYNNVILNLAR 102

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            + ++E+K + ++  E  + A     + ++     + Q      + +++   L       
Sbjct: 103 HKRLYEKKMVSKYELETLELAEKNLKDMVEISQEQVNQALAKKEEVLNQYNYLR------ 156

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +P  G IV  +       A    P + +        I A+++  Q+  +  G    V
Sbjct: 157 -ITAPNDGVIVAKRIN-EGEMAIPGMPAVVLT-DLSRLKIVAEISETQLPFIHLGKEVEV 213

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
             P      + K  +II   +P+  +          +++ ++     F      +  G  
Sbjct: 214 EVPSLNLKTKGKISSIIPNSNPMTHK----------FKIKIE-----FDHKGKSVYPGMY 258

Query: 411 AEVLFT 416
           A+++  
Sbjct: 259 AKIIIR 264



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 5/125 (4%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +  DN   + S + G IK   V  G  + +G  L   +  E         ++I   R  +
Sbjct: 27  VVSDNQKMMTSRYMGYIKNMAVSEGDIVKKGQLLYEIDSKEIEAAERQVDLAISQARLAL 86

Query: 111 DTEKSA-----LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
              K+      L+   +K    +K     E + L+   K      ++    ++      +
Sbjct: 87  QMNKNQYNNVILNLARHKRLYEKKMVSKYELETLELAEKNLKDMVEISQEQVNQALAKKE 146

Query: 166 MKLTR 170
             L +
Sbjct: 147 EVLNQ 151


>gi|113868830|ref|YP_727319.1| cation/multidrug efflux system, mebrane-fusion component [Ralstonia
           eutropha H16]
 gi|113527606|emb|CAJ93951.1| Cation/multidrug efflux system, mebrane-fusion component [Ralstonia
           eutropha H16]
          Length = 370

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/220 (11%), Positives = 68/220 (30%), Gaps = 20/220 (9%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-- 260
           + +     + + D  + E  V ++  ++     + +N  +      +     F +     
Sbjct: 93  EPVRAGQVIVRIDPTEYEARVAQARGQMLATRGQFENSRQTWERNRELVGKGFISRTAFD 152

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           +   DL+            L + +K      + +P+ G +   ++            L+ 
Sbjct: 153 KYQADLDVAHANLDAAQGGLAVAQKALADTVVKAPLDGMV-AARAVQPGEKVSPDTRLVD 211

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +V   ++  + A +    +     G                +F   + +I+P +SQ   +
Sbjct: 212 VV-DLRVLELEAPIPMADVARAAVGQPV-----ALDVEGAGRFTGKLVRINPAVSQGTRS 265

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +       V ++I      + +  LR G  A         
Sbjct: 266 IM------VYIRI-----ENADQTLRAGMFARGALVLGER 294



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 39/123 (31%), Gaps = 3/123 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +K+  SG +K   V  G  +  G  ++  +  E    +   +  +   R   +  +   +
Sbjct: 76  VKAKVSGEVKAVLVREGEPVRAGQVIVRIDPTEYEARVAQARGQMLATRGQFENSRQTWE 135

Query: 119 ---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
               L  K  +   AF+  +  L        +    +     +     +K  L  M +  
Sbjct: 136 RNRELVGKGFISRTAFDKYQADLDVAHANLDAAQGGLAVAQKALADTVVKAPLDGMVAAR 195

Query: 176 LNR 178
             +
Sbjct: 196 AVQ 198


>gi|264679876|ref|YP_003279785.1| macrolide-specific efflux protein macA [Comamonas testosteroni
           CNB-2]
 gi|262210391|gb|ACY34489.1| macrolide-specific efflux protein macA [Comamonas testosteroni
           CNB-2]
          Length = 393

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 53/137 (38%), Gaps = 6/137 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V++ G +     V ++ +  SG I +  V  G+++ +G  L+  +       +D  
Sbjct: 44  VESTVTAIGTLQPRTYV-DVGAQVSGQITRLLVSPGARVEKGALLVEIDPSVQRATVDAG 102

Query: 100 KVSIKNLRCHIDTEKSALDFL-----NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           + S+ +L   I  +++ L          +    E+A    + Q+ +      +       
Sbjct: 103 RASLASLGAQIAEQQAQLKLAGQQLKRQQQLAAEEATRQEDVQIAEAQVAGAAARIDHLK 162

Query: 155 YGISSVYRSLKMKLTRM 171
             +     SLK    R+
Sbjct: 163 AQMQQTQASLKADEARL 179


>gi|254425101|ref|ZP_05038819.1| chromosome segregation protein SMC [Synechococcus sp. PCC 7335]
 gi|196192590|gb|EDX87554.1| chromosome segregation protein SMC [Synechococcus sp. PCC 7335]
          Length = 1230

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/212 (10%), Positives = 76/212 (35%), Gaps = 15/212 (7%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             +  +           +   +  ++  +S     + +   LE+    +E+ L++     
Sbjct: 784 ELKATQAERQRQAITERVAQAKAQLEKTESDYAQAHVQLAALEQTLAVQEQGLVEKRQAL 843

Query: 146 HSTCS-------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +          +     + ++   L  +  R+RS    + DL  +   L+  L S +  
Sbjct: 844 AALEESETHGEWQAAQGVVRALETQLNEQQQRLRSAEKRQQDLLTQQQRLQEKLQSCRDQ 903

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           +  ++   +     Q+++ +Q++        L+  I + +  +  +++   +        
Sbjct: 904 IAALRTQQQAQINQQSEIARQQQT-------LQGTIAQTQGAIAILDDKLKQEKTARDTI 956

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            ++   +  + Q+    ++ KL   +  R+Q+
Sbjct: 957 ERQSKIEQNEQQQNHW-QLQKLQETQSLRQQQ 987



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 77/225 (34%), Gaps = 7/225 (3%)

Query: 68   KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +   V+    + +   L   E+ ET       +  ++ L   ++ ++  L     +   L
Sbjct: 827  QTLAVQEQGLVEKRQALAALEESETHGEWQAAQGVVRALETQLNEQQQRLRSAEKRQQDL 886

Query: 128  EKAFESREEQLLDFLGKYHSTCS--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                +  +E+L     +  +  +  +      S + R  +     +         L++K 
Sbjct: 887  LTQQQRLQEKLQSCRDQIAALRTQQQAQINQQSEIARQQQTLQGTIAQTQGAIAILDDKL 946

Query: 186  SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
               +    + ++   + +N  ++N      L + + +  +   +L ++I +Q   L    
Sbjct: 947  KQEKTARDTIERQSKIEQNEQQQNHWQLQKLQETQSLRQQQLRDLHQSIEQQALEL---- 1002

Query: 246  ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                   +     L+E+++ L+  QR          +  +  E+ 
Sbjct: 1003 -PEPLPEIPEELTLEELNKSLKSLQRRLESLEPVNMLALEEYERT 1046



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 70/197 (35%), Gaps = 6/197 (3%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK---VF 153
             ++   + L   ID    A + +  K   L +  E+   +L     K  +   +     
Sbjct: 285 RSRQKQAEQLASQIDQGHRAGEAIEQKIAALTEKMEATATELAALNVKVKALGEEEYLAL 344

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +++    L+  + +   +  +  D+  + +  +A +   + +LT +          +
Sbjct: 345 QAQLATQEAELRQLVRQSELLGKSTGDISAQLAATQAAIQDQEGELTDVSRRARSLTDEE 404

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
               + ER    + LE +    E+   +   ++ + +   +    L+ +   LE  +   
Sbjct: 405 LAQIKAERDRAITQLEAKR---EETAAIAGKSQAWMQQQRDLRRQLESLLDQLEPQRTER 461

Query: 274 ADEMSKLTILEKTREQK 290
                +L+ LE  R ++
Sbjct: 462 VRLQERLSRLEPQRTEQ 478



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 63/214 (29%), Gaps = 9/214 (4%)

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L+  E       +  K+ S + +       ++ L     +           + +     
Sbjct: 751 ILIRCEQKVNQLTLKAKEKSKELIEARQQYRENELKATQAERQRQAITERVAQAKAQLEK 810

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN--KSSLLRALLSSHQKDLT 200
            +     + V    +       +  L   R       + E   +    + ++ + +  L 
Sbjct: 811 TESDYAQAHVQLAALEQTLAVQEQGLVEKRQALAALEESETHGEWQAAQGVVRALETQLN 870

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
             +         Q DL  Q++ + +     R+ I      LR   +       E A   +
Sbjct: 871 EQQQRLRSAEKRQQDLLTQQQRLQEKLQSCRDQIA----ALRTQQQAQINQQSEIARQQQ 926

Query: 261 EISRDLEQNQRTFA---DEMSKLTILEKTREQKT 291
            +   + Q Q   A   D++ +      T E+++
Sbjct: 927 TLQGTIAQTQGAIAILDDKLKQEKTARDTIERQS 960


>gi|168182306|ref|ZP_02616970.1| efflux transporter, RND family, MFP subunit [Clostridium botulinum
           Bf]
 gi|237793402|ref|YP_002860954.1| putative macrolide efflux transporter, RND family, MFP subunit
           [Clostridium botulinum Ba4 str. 657]
 gi|182674535|gb|EDT86496.1| efflux transporter, RND family, MFP subunit [Clostridium botulinum
           Bf]
 gi|229263301|gb|ACQ54334.1| putative macrolide efflux transporter, RND family, MFP subunit
           [Clostridium botulinum Ba4 str. 657]
          Length = 353

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 88/238 (36%), Gaps = 15/238 (6%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +NK   L       + ++ +   + +  ++ + D+++ E     + +E    I ++K + 
Sbjct: 57  KNKKEYLGGQAKIKKVNVKVGDKVKKGQSLLKFDMSELENDRQVAQMEYDNAISQKKALK 116

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
              N   ++ N   ++ ++++   +   +        K+   E+T         I G + 
Sbjct: 117 SQKNSEQNKMNSITSSQIEQVENSVRLAELKLESVNDKINESEETIAD------IDGIVT 170

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              + +    A Q QPL+ +V +     +   +       VKKG    V+        +K
Sbjct: 171 EVNAQAGGISAGQGQPLV-VVENVDDLKVAVSLGKYDSTKVKKGMKVFVK------NDDK 223

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           K++A ++ I P   +           +  L        +N+ +LR GF  +V      
Sbjct: 224 KYEAKVDFIAPTAKKTIKEAGGGN--DTTLDCEIYLSKNNSKDLRVGFDVDVDILLGE 279



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 11/162 (6%)

Query: 51  LNEDNVVEIKSPFSGI--IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
           +   N  E      G   IKK  V+ G ++ +G  LL F+  E  +   + ++   N   
Sbjct: 54  VVSKNKKE---YLGGQAKIKKVNVKVGDKVKKGQSLLKFDMSELENDRQVAQMEYDNAIS 110

Query: 109 HIDTEKSALDFLNNK------YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
                KS  +   NK        + +     R  +L           S+     I  +  
Sbjct: 111 QKKALKSQKNSEQNKMNSITSSQIEQVENSVRLAELKLESVNDKINESEETIADIDGIVT 170

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            +  +   + +     L +      L+  +S  + D T +K 
Sbjct: 171 EVNAQAGGISAGQGQPLVVVENVDDLKVAVSLGKYDSTKVKK 212


>gi|167856428|ref|ZP_02479150.1| putative RND efflux membrane fusion protein [Haemophilus parasuis
           29755]
 gi|167852451|gb|EDS23743.1| putative RND efflux membrane fusion protein [Haemophilus parasuis
           29755]
          Length = 397

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/123 (9%), Positives = 45/123 (36%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K  V++G ++ +G  L+  +       +   +  +   R + +  ++ +   +   
Sbjct: 85  GTVTKVLVKSGDKVKKGQLLVEIDSSAEQASLKATEAQLSTARANYNRYRNLVASSSASK 144

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              + A  + E+ +            +            + + + +  +I    + +E++
Sbjct: 145 AEFDNAKATYEQLVATIEATKAQIERRQIYAPFDGEAGIVNVNVGQYVTIGTGIVRVEDQ 204

Query: 185 SSL 187
           S++
Sbjct: 205 SAM 207


>gi|157960187|ref|YP_001500221.1| RND family efflux transporter MFP subunit [Shewanella pealeana ATCC
           700345]
 gi|157845187|gb|ABV85686.1| efflux transporter, RND family, MFP subunit [Shewanella pealeana
           ATCC 700345]
          Length = 372

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 81/212 (38%), Gaps = 21/212 (9%)

Query: 209 NAVSQNDL-NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS---- 263
             VS     N  +    +  +EL   + +     + +     EA+ +  + L + +    
Sbjct: 78  GVVSAIRFENGSQVQAGQMLVELDSKVEKANLKSKQVQLPAAEADYKRLSKLYKQNSISK 137

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           +DL+ +Q  +   M+ +  L  T +++ I +   G +   ++ +   Y Q    ++++  
Sbjct: 138 QDLDNSQSKYLALMADIESLSATIDRREIKAAFTGLV-GIRNVNLGEYLQTGTDIVRL-E 195

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                 IR  +   Q+  ++ G    V    Y     + F+  I  I+P +         
Sbjct: 196 DISTMKIRFTIPQTQLPRIETGQVVHVHVDAYP---TEPFEGTISAIEPAV--------- 243

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +Y+  L        +++ +LR+G  A+V  
Sbjct: 244 --FYQSGLIQVQALIPNSHGKLRSGMFAKVDI 273



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 93/290 (32%), Gaps = 26/290 (8%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +     V  I +  +G++   + ENGSQ+  G  L+  +       +  K+V +  
Sbjct: 60  AIGFVEPNQGV-SIANEVAGVVSAIRFENGSQVQAGQMLVELDSKVEKANLKSKQVQLPA 118

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                          +     L+ +       + D      +   +      + +     
Sbjct: 119 AEADYKRLSKLYKQNSISKQDLDNSQSKYLALMADIESLSATIDRREIKAAFTGLVGIRN 178

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---------------------N 204
           + L        + + LE+  S ++   +  Q  L  ++                     +
Sbjct: 179 VNLGEYLQTGTDIVRLED-ISTMKIRFTIPQTQLPRIETGQVVHVHVDAYPTEPFEGTIS 237

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEIS 263
             E     Q+ L Q + ++  S  +LR  +  +   ML  + +         +  L   S
Sbjct: 238 AIEPAVFYQSGLIQVQALIPNSHGKLRSGMFAKVDIMLPELTQQVVLPQTAISFTLYGDS 297

Query: 264 RDLEQNQRTFADEMSKLTILE-KTREQKTILSPIAGTIV-YNQSFSSSNY 311
             + + +    +++ ++  +  K  E+  I + I G +   +   +S   
Sbjct: 298 VYVIEEKNEDGEQVKRVKQVNVKVLERDDINALITGGVNAGDTIVTSGQV 347


>gi|77461662|ref|YP_351169.1| secretion protein HlyD [Pseudomonas fluorescens Pf0-1]
 gi|77385665|gb|ABA77178.1| putative HlyD-family secretion protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 321

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 46/131 (35%), Gaps = 5/131 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILL-PIEISVS-SSGEILNEDNVVEIKSPFSGIIK 68
           R          +L ++   G   W  +   +   +  ++G +      V+I S   G + 
Sbjct: 5   RRSSLLYAGALILLLMAAGGFGYWKSMSNRLPEGLHSANGRLEATQ--VQIASKTPGRLA 62

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G ++ +G  L   +        +  +  +   R ++   ++ +  L     +L 
Sbjct: 63  EVLVDEGDKVSKGQLLARMDTRTLEAQRNQAEAEVIRARENLAAAQANVQ-LRLSEQLLA 121

Query: 129 KAFESREEQLL 139
           +    R + L 
Sbjct: 122 QQELGRSQSLF 132



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/299 (11%), Positives = 78/299 (26%), Gaps = 48/299 (16%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +      R  ++L   G   S    +      ++          +     N    +    
Sbjct: 53  IASKTPGRLAEVLVDEGDKVSKGQLLARMDTRTLEAQRNQAEAEVIRARENLAAAQANVQ 112

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           L  +     Q++L   ++LF+   VS                           ++  +  
Sbjct: 113 LRLSEQLLAQQELGRSQSLFKHGFVS-------------------------AQVIDQLQS 147

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
               A+        +++          A      + ++ +R    + +PI G I   +  
Sbjct: 148 RIGTASAAVTAARAQVAAVSAAIGAAQAQVAQLASEIDDSR----LRAPIDGLIQ-LRMA 202

Query: 307 SSSNYAQQ-SQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                     + L+ I P  +    Y+ A V       +  G  A +      D      
Sbjct: 203 EPGEVLGAGGRVLLLIDPGDQYMNLYLPASVA----GRLAVGDEARILLDALPDQ---AL 255

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            A +  +           +  + + +  + V L++T           + G P       
Sbjct: 256 PAKVSFVAAKSQFTPKEVETRDERQKLVFRVKLRLTRPGDVPQA---KPGMPGTGYVRT 311


>gi|87125317|ref|ZP_01081163.1| putative chromosome segregation protein, SMC ATPase superfamily
           protein [Synechococcus sp. RS9917]
 gi|86167086|gb|EAQ68347.1| putative chromosome segregation protein, SMC ATPase superfamily
           protein [Synechococcus sp. RS9917]
          Length = 1185

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 74/199 (37%), Gaps = 1/199 (0%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +     +  + +   L+  +   ++ +  L  + D L +  +  + Q      +      
Sbjct: 757 QRHQRQETLRSNQAGLQERLGVLQATITPLQEELDKLLQLEQEAQSQGDAGNWQQLQHDL 816

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +  +  +++  +     L + R   L    L ++  +L A     Q+ +  ++   ++  
Sbjct: 817 EAADAALAAARQRRDGLLQQQRERQLAIERLADQEQVLAAEEQRLQEAVQALQVTHQRWK 876

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             Q +L+++ +++ +   EL+    EQ+           E          E+ R L++ Q
Sbjct: 877 GEQQELHERRQVLEQRQQELQTRFGEQRRARDEAEAAVAEQRQRLQQTRWELER-LQEEQ 935

Query: 271 RTFADEMSKLTILEKTREQ 289
           ++ A+ +    I  +  E 
Sbjct: 936 QSLAEHLRSGAIRLQELEA 954



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 62/216 (28%), Gaps = 18/216 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +   +    +    +  +  ++ E+SA    +       +    R+E L           
Sbjct: 717 VAALESARPQLREREQRQAALEAERSAARRAHAPLLERTRQRHQRQETLRSNQAGLQERL 776

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLN----------------RLDLENKSSLLRALLS 193
             V    I+ +   L   L   +                        L         LL 
Sbjct: 777 G-VLQATITPLQEELDKLLQLEQEAQSQGDAGNWQQLQHDLEAADAALAAARQRRDGLLQ 835

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             ++    ++ L ++  V   +  + +  V    +  +    EQ+ +     ++ ++   
Sbjct: 836 QQRERQLAIERLADQEQVLAAEEQRLQEAVQALQVTHQRWKGEQQELHER-RQVLEQRQQ 894

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           E      E  R  ++ +   A++  +L       E+
Sbjct: 895 ELQTRFGEQRRARDEAEAAVAEQRQRLQQTRWELER 930



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 60/204 (29%), Gaps = 6/204 (2%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS--TCS 150
                D      +  +  I+        L  +   L++A ++ +     + G+        
Sbjct: 827  RQRRDGLLQQQRERQLAIERLADQEQVLAAEEQRLQEAVQALQVTHQRWKGEQQELHERR 886

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +V       +      +            +   +    R  L   Q++   +       A
Sbjct: 887  QVLEQRQQELQTRFGEQRRARDEAEAAVAEQRQRLQQTRWELERLQEEQQSLAEHLRSGA 946

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQN 269
            +    L + E  +     E+ + +      L   +    +  +E    +      +L + 
Sbjct: 947  I---RLQELEAALPDPRPEIPDALRAAGLELLQASLQQLQQRMEALEPVNMLALEELAEL 1003

Query: 270  QRTFADEMSKLTILEKTREQKTIL 293
            ++   D   +L +L + RE+  + 
Sbjct: 1004 EQRLGDLGERLDVLSQEREELLLR 1027


>gi|283954113|ref|ZP_06371638.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283794392|gb|EFC33136.1| macrolide-specific efflux protein macA [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 388

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 66/136 (48%), Gaps = 3/136 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  ++ + G++  +D V ++ +  SG I K  V+ G+ + QG  +   +  +  + +D+ 
Sbjct: 42  ISQTIEAVGKVYAKDQV-DVGAQVSGQIIKLYVDVGTHVKQGDLIAQIDKDKQQNDLDIT 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K  +++ + +++++K AL+  + +Y   +K + ++   L +   + ++  +      ++ 
Sbjct: 101 KAQLQSAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYT--LKANVAE 158

Query: 160 VYRSLKMKLTRMRSIY 175
           +   +      +++  
Sbjct: 159 LNAQVVQLEITLKNAQ 174



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 6/167 (3%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +Q    +      K  LE+    ++++  L        E      N    +  ++ +   
Sbjct: 102 AQLQSAKANLESKKVALEIASKQYQREQKLYAAKASSLENLETQKNNYYTLKANVAELNA 161

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHSKLTY 329
                   L   +K  +  TI +P+ G ++             +Q    IV   +     
Sbjct: 162 QVVQLEITLKNAQKDLDYTTISAPMDGVVINVAVD-EGQTVNANQNTPTIVRIANLDEME 220

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           +R ++    +  +K G    + F    D  +K + A I  IDP  ++
Sbjct: 221 VRMEIAEADVSKIKVG--TELDFSLLND-PQKTYHAKIASIDPADTE 264


>gi|146282476|ref|YP_001172629.1| efflux transporter, membrane fusion protein, putative [Pseudomonas
           stutzeri A1501]
 gi|145570681|gb|ABP79787.1| efflux transporter, membrane fusion protein, putative [Pseudomonas
           stutzeri A1501]
          Length = 299

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 64/189 (33%), Gaps = 23/189 (12%)

Query: 208 KNAVSQNDLNQQERI--------VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              V++  +   +R+        + ++  +L  +  +   + R       +        L
Sbjct: 55  SGLVTELRVRDNQRVTRGQVLFVIDRARFQLAVDEAQATVLERRAQLEQAQREARRNRVL 114

Query: 260 KEISR----DLEQNQRTFADEMSKLT-----ILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           K++      ++   Q   A+           + +   E+ T+LSP+ G  + +Q+    +
Sbjct: 115 KDLIAAETVEIGDTQVKRAEAALATAEAALGVAQLDLERTTVLSPVDGY-LGDQTMRVGD 173

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           Y +   P++ IV  +    +       ++  +  G    +          +  +  ++ I
Sbjct: 174 YVKTGTPVLSIV-DTNSLRVEGYFEETKLHAIAIGQPVDIHV----MGETQHLRGHVQSI 228

Query: 371 DPIISQQDN 379
              I  +D 
Sbjct: 229 AAGIEDRDR 237



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 31/79 (39%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              ++V++    SG++ + +V +  ++ +G  L   +       +D  + ++   R  ++
Sbjct: 43  VHADIVQVAPDVSGLVTELRVRDNQRVTRGQVLFVIDRARFQLAVDEAQATVLERRAQLE 102

Query: 112 TEKSALDFLNNKYDVLEKA 130
             +          D++   
Sbjct: 103 QAQREARRNRVLKDLIAAE 121


>gi|56696381|ref|YP_166738.1| RND family efflux transporter MFP subunit [Ruegeria pomeroyi DSS-3]
 gi|56678118|gb|AAV94784.1| efflux transporter, RND family, MFP subunit [Ruegeria pomeroyi
           DSS-3]
          Length = 416

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 71/215 (33%), Gaps = 18/215 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + +R   +S L+    + E+    +   +  ++        L  +S  +   +   A+  
Sbjct: 133 EAKRDFAESELDRAGKLVERGVTSQVTLQRAEQEARVARANLDTVSAAIAMREAELANAR 192

Query: 278 SKLTILEKTREQKTI------------LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           ++L   +       +             +PI GTI+     S +       P+++I    
Sbjct: 193 AQLIGFDDAALGAVLSERNPEGYSIPLRAPIDGTILKVIQKSETT-LPAGAPILEIGDIE 251

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               + A++       V+ G    +          +    I+ +IDP    + + L  +E
Sbjct: 252 GDLEVMAELLSSDAVQVQTGDRVIIT----NWGGARDLVGIVSRIDPYGYTKHSALGVEE 307

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
              V + I     SD    L +G+  EV       
Sbjct: 308 -QRVQVIIQFETPSDKRENLGHGYRVEVQIVVWER 341



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 71/199 (35%), Gaps = 22/199 (11%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLP---IEISVSSSGEILNE------DNVV-- 57
           L R    S   +TL++ +G+ G + ++       ++++    G ++          V   
Sbjct: 4   LARQQRRSRSFLTLVTALGVAGFLAYAFWPRPMLVDMAEVVQGRMVLTIDEEGRTRVKEP 63

Query: 58  -EIKSPFSGIIKKFQVENGSQILQGTPLL---------TFEDIETTDLIDLKKVSIKNLR 107
             + SP +G +++  VE G  + +G  ++           +             +   LR
Sbjct: 64  YVVSSPVAGELQRVTVEPGEVVERGKTVVAQMRPANPSALDVRTREQAHAAVTAAEAALR 123

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGISSVYRSLKM 166
                  +A    +     L++A +  E  +   +  +     ++V    + +V  ++ M
Sbjct: 124 LAHADLNAAEAKRDFAESELDRAGKLVERGVTSQVTLQRAEQEARVARANLDTVSAAIAM 183

Query: 167 KLTRMRSIYLNRLDLENKS 185
           +   + +     +  ++ +
Sbjct: 184 REAELANARAQLIGFDDAA 202


>gi|148264418|ref|YP_001231124.1| RND family efflux transporter MFP subunit [Geobacter uraniireducens
           Rf4]
 gi|146397918|gb|ABQ26551.1| efflux transporter, RND family, MFP subunit [Geobacter
           uraniireducens Rf4]
          Length = 395

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 71/193 (36%), Gaps = 7/193 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V + G +    N V IK+  +G I +     G ++ +G  L+T +       +   + ++
Sbjct: 67  VKAIGNVEAY-NTVSIKAQVNGQIARVHFREGQEVKKGDLLITIDPRPFETALKQAQANL 125

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +          D    +Y  L K      EQ         +  + + +   +     
Sbjct: 126 LKDQAQA----RNADEQVRRYGGLVKDGIVTREQYDQLKTSADAFAATLASDQAAVESAK 181

Query: 164 LKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           +++    +RS    R    +  + +L++A        +  +  ++   +V +NDL + ++
Sbjct: 182 IQLAYCFIRSPINGRTGNLMVQQGNLVKANDVPVLVTINQINPVYVTFSVPENDLLEIKK 241

Query: 222 IVYKSTLELRENI 234
            +    L++   I
Sbjct: 242 YMAGGRLKVAAAI 254


>gi|149278352|ref|ZP_01884489.1| Membrane-fusion protein [Pedobacter sp. BAL39]
 gi|149230722|gb|EDM36104.1| Membrane-fusion protein [Pedobacter sp. BAL39]
          Length = 330

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 40/112 (35%), Gaps = 5/112 (4%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA---LDF 119
             GII   +V+ G  + +G  L      E    +   +   +  +   D ++ A    D 
Sbjct: 53  TGGIINAIKVKEGDHVRRGQVLALLNMTEVNANLGQAEAQYQ--KARRDAQRIANLYRDS 110

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           ++ +  +          +    + ++++T S +       V + L  +  ++
Sbjct: 111 VSTREQLENSQTALDIAKKQYDIARFNTTQSSIIANTDGVVLKKLANEGEQV 162



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 62/198 (31%), Gaps = 19/198 (9%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           E+  N+ + +   +            + + +      LE +Q        +  I      
Sbjct: 81  EVNANLGQAEAQYQKARRDAQRIANLYRDSVS-TREQLENSQTALDIAKKQYDIARFNTT 139

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP-HSKLTYIRAKVTPKQIQHVKKGYT 347
           Q +I++   G ++   +           P++ I    SK   I+  +T K+   +     
Sbjct: 140 QSSIIANTDGVVLKKLAN-EGEQVTGGTPVLYISSIASKDWVIKCGITDKERSRIHGNEN 198

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           A + F           +  ++ I         +      Y+V ++          ++L +
Sbjct: 199 AELHFDVLPQT----VRGKVKSI------AQGSDAGSGLYQVEIR-----LEPEGVKLVS 243

Query: 408 GFPAEVLF-TAKNTTLAQ 424
           G  A+V    +  T L  
Sbjct: 244 GLFAKVKIFPSGKTELLS 261


>gi|146277544|ref|YP_001167703.1| RND family efflux transporter MFP subunit [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145555785|gb|ABP70398.1| efflux transporter, RND family, MFP subunit [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 397

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 102/309 (33%), Gaps = 28/309 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
             AL  +     V     +      L    +       +    I ++   +   +   + 
Sbjct: 37  AQALPAITVSTVVRRPMRDRVIASGLIGAVELVQVQPLIEGQPIEALEADVGDMVAEGQV 96

Query: 174 I-YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +  L+   LE + S   A L+S +  +   +    +   +Q+  ++ ER V + T +LRE
Sbjct: 97  LARLSVSTLELQKSQFTASLASARATIAQAE---AQVLEAQSSADEAER-VNRRTAQLRE 152

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                +            AN           + LE  +   A   ++L  +E   ++ ++
Sbjct: 153 QGAASQAAADTAQASSVSANARVMV----ARQTLEAARAQVALAEAQLANVELQLKRTSV 208

Query: 293 LSPIAGTIVYNQSFSSSNYAQQ-SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           ++P+AG IV  ++      A    +P+  ++       + A V  + +  ++ G +  +R
Sbjct: 209 VAPVAGEIVS-RNAKVGAIASAQGEPMFTLL-RDGRLELFADVAEQDLLRLRPGQSVKIR 266

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
                    +     +  ++P I                + I  +        +R+G  A
Sbjct: 267 ----TLGAAEPIPGSVRLVEPAIDTATRLG------RARIAIDRIE------AVRSGMFA 310

Query: 412 EVLFTAKNT 420
           E        
Sbjct: 311 EAEILVTER 319



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 76/250 (30%), Gaps = 7/250 (2%)

Query: 44  VSSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V +SG I   + V  ++       I+  + + G  + +G  L                 S
Sbjct: 57  VIASGLIGAVELVQ-VQPLIEGQPIEALEADVGDMVAEGQVLARLSVSTLELQKSQFTAS 115

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           + + R  I   ++ +    +  D  E+    R  QL +      +         +S+  R
Sbjct: 116 LASARATIAQAEAQVLEAQSSADEAERVNR-RTAQLREQGAASQAAADTAQASSVSANAR 174

Query: 163 SLKMKLT---RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            +  + T       + L    L N    L+           ++    +  A++       
Sbjct: 175 VMVARQTLEAARAQVALAEAQLANVELQLKRTSVVAPVAGEIVSRNAKVGAIASAQGEPM 234

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
             ++    LEL  ++ EQ  +     +      L  A  +    R L +     A  + +
Sbjct: 235 FTLLRDGRLELFADVAEQDLLRLRPGQSVKIRTLGAAEPIPGSVR-LVEPAIDTATRLGR 293

Query: 280 LTILEKTREQ 289
             I     E 
Sbjct: 294 ARIAIDRIEA 303


>gi|160900569|ref|YP_001566151.1| RND family efflux transporter MFP subunit [Delftia acidovorans
           SPH-1]
 gi|160366153|gb|ABX37766.1| efflux transporter, RND family, MFP subunit [Delftia acidovorans
           SPH-1]
          Length = 427

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/148 (10%), Positives = 54/148 (36%), Gaps = 12/148 (8%)

Query: 36  ILLPIEISVSSSGEILN----EDN-----VVEIKSPFSGIIKKFQVENGSQILQGTPLLT 86
              P+ ++  +  E+               V+I+S  +G ++      G+ + QG  L+T
Sbjct: 58  AATPVSVATVAESEVTAWDEFSGRLEAVERVDIRSRVAGAVQAVHFREGALVKQGDLLIT 117

Query: 87  FEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            +       ++  +  + + +       +E+     L ++  + ++  + R     +   
Sbjct: 118 IDPAPYAAEVERAEAQVASAQARQSYARSEQERARRLWDERAIAQRELDERINAGSEAEA 177

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              +  + + +  ++  Y  ++  ++  
Sbjct: 178 NLRAAQASLQSARLNLGYTQVRAPVSGR 205



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/155 (11%), Positives = 47/155 (30%), Gaps = 14/155 (9%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN----AVSQNDLNQQERIVYKST 227
           R   + R+D+ ++ +     +   +  L    +L          ++ +  + +    ++ 
Sbjct: 81  RLEAVERVDIRSRVAGAVQAVHFREGALVKQGDLLITIDPAPYAAEVERAEAQVASAQAR 140

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                +  E+   L     +      E  N   E   +L   Q       + L       
Sbjct: 141 QSYARSEQERARRLWDERAIAQRELDERINAGSEAEANLRAAQ-------ASLQSARLNL 193

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYA--QQSQPLMK 320
               + +P++G I   +  +  N        P++ 
Sbjct: 194 GYTQVRAPVSGRI-GKREITVGNLVAAGPGAPVLT 227


>gi|91787081|ref|YP_548033.1| secretion protein HlyD [Polaromonas sp. JS666]
 gi|91696306|gb|ABE43135.1| secretion protein HlyD [Polaromonas sp. JS666]
          Length = 396

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 69/206 (33%), Gaps = 20/206 (9%)

Query: 14  PASLKRMTLLSIIGIIGLI--TWSI-----LLPIEISV--SSSGEILNE---------DN 55
           P +L R   L+  G+  L+   W       L PI+++V   ++G +              
Sbjct: 4   PFTLPRWVWLTAAGVAVLLAFGWVATASGPLAPIKVTVTQVATGTVAPSLFGIGTVEARR 63

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
              I    +G +K+  V+ G ++  G  L   + ++    +     +    +  + T ++
Sbjct: 64  AYLIGPTTAGRVKRVLVDVGDRVRAGQLLAEMDPVDLDARVGSSAAAAARAQSAVATAQA 123

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            +    ++  +   A E+R    L        +  +       S    L    +   S  
Sbjct: 124 QVRDAQSRQAL--AAGEARRYIDLGKQNFISPSVVEGKLQQQQSADAQLVAARSVQTSAR 181

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTM 201
            +   LE +    R    + + +  +
Sbjct: 182 QDVSRLEAEREGARQQRGNIRLEAPI 207



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/172 (8%), Positives = 53/172 (30%), Gaps = 7/172 (4%)

Query: 212 SQNDLNQQERIVYKSTLELRE--NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +Q  +   +     +  E R   ++ +Q  +   + E   +        L          
Sbjct: 121 AQAQVRDAQSRQALAAGEARRYIDLGKQNFISPSVVEGKLQQQQSADAQLVAARSVQTSA 180

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           ++  +   ++     + R    + +PI G +   +     +     Q ++K++      +
Sbjct: 181 RQDVSRLEAEREGARQQRGNIRLEAPIDGVVTS-RDAEPGSTVVAGQAVLKLI-DPASLW 238

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           +  ++   +   + +G  A +         +      + +++ +        
Sbjct: 239 VTTRLDQSRSAGLHEGLPAEITL---RSSAQGSVPGKVVRLELVSDSVTEER 287


>gi|78061575|ref|YP_371483.1| HlyD family secretion protein [Burkholderia sp. 383]
 gi|77969460|gb|ABB10839.1| Secretion protein, HlyD family [Burkholderia sp. 383]
          Length = 397

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 76/191 (39%), Gaps = 16/191 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V ++G +     V ++ +  SG +K  +V+ G ++ +G  L   + + + + +   
Sbjct: 48  LENAVLATGALQAFRQV-DVGAQVSGQLKSLKVKLGDKVTKGQWLAEIDPVISENALRQA 106

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S ++LR    +  + L          E AF+ ++  L D      +T  + F    ++
Sbjct: 107 RASEESLRAQQQSTAAQLTQA-------ELAFKRQQAMLPD-----DATSRESFEAARAA 154

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +        +    I   R+ +E   + L         D  ++  + ++    Q  + QQ
Sbjct: 155 LDVQRATLSSLAAQIRSARIQIETAQANLGYTRIVAPIDGEVVAVVTQEG---QTVIAQQ 211

Query: 220 ERIVYKSTLEL 230
           +  V     +L
Sbjct: 212 QAPVILKLADL 222



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 72/243 (29%), Gaps = 5/243 (2%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R       S           L+     +  Q L          + V   G    +R + +
Sbjct: 7   RRRRIVLASLAIVAIATGVTLKACAPDKHPQYLSAPVSRGDLENAVLATGALQAFRQVDV 66

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
                  +   ++ L +K +  + L      D  + +N   +   S+  L  Q++     
Sbjct: 67  GAQVSGQLKSLKVKLGDKVTKGQWLAEI---DPVISENALRQARASEESLRAQQQSTAAQ 123

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             +       Q+ ML       +      A    +    L            ++   +  
Sbjct: 124 LTQAELAFKRQQAMLPDDATSRESFEAARAALDVQ-RATLSSLAAQIRSARIQIETAQAN 182

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                I++PI G +V   +        Q Q P++  +       ++A+V+   +  V  G
Sbjct: 183 LGYTRIVAPIDGEVVAVVTQEGQTVIAQQQAPVILKLADLDTMTVKAQVSEADVIRVSAG 242

Query: 346 YTA 348
            TA
Sbjct: 243 QTA 245


>gi|311247399|ref|XP_003122641.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase
            beta-3-like [Sus scrofa]
          Length = 1247

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 85/222 (38%), Gaps = 15/222 (6%)

Query: 87   FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN---------KYDVLEKAFESREEQ 137
               + +    DL+++  K+ R  +   +  LD L           +  VL    E  EE+
Sbjct: 980  LVKLRSRQERDLRELRKKHQRKAVALTRRLLDSLAQARAEGRCRPRPGVLGGEDEKEEEE 1039

Query: 138  LLDFLGKYHSTCSK---VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             +    ++     +         + +    +++  +     L  + +E  ++  + L   
Sbjct: 1040 EVKRYQEFQKKQVQCLLELREAQADIETERRLEHLKQAQQRLREVVMEAHTTQFKRLKEM 1099

Query: 195  HQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            + ++   ++ + ++   N++S+    ++ +   + T   R +I E  N +R + E   + 
Sbjct: 1100 NDREKKELQKILDRKRHNSISEAKTREKHKKEAELTEINRRHITESVNSIRRLEEAQKQR 1159

Query: 252  NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            +       ++I + L + +     ++++    ++ R  + I 
Sbjct: 1160 HERLVAGQQQILQQLAEEEPKLLAQLAQECQEQRERLPQEIR 1201


>gi|325110167|ref|YP_004271235.1| secretion protein HlyD [Planctomyces brasiliensis DSM 5305]
 gi|324970435|gb|ADY61213.1| secretion protein HlyD family protein [Planctomyces brasiliensis
           DSM 5305]
          Length = 366

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 62/181 (34%), Gaps = 1/181 (0%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
              P    V+ +G +      +EI +  +G++K+  V  G ++     L++ +  +    
Sbjct: 38  AQSPFSSKVAGAGIVEARSENIEIAADVAGVVKRVHVIWGDKVQPRQQLVSLDARDIQAE 97

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           I+++K  +K+    ++  ++              A         + +       ++    
Sbjct: 98  IEIRKADLKSAEVELERLRNQPRPEEIPPLEAAVAEAEARLTRAEDIYGRQQRLTQQQVT 157

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +  +    LT    +     DL   K+      L   + +++ M++  +K  V   
Sbjct: 158 TQEELVIARTDLLTAQALLKKAEADLALLKAGAWEQDLLVAKANVSRMRSEVDKFMVEAE 217

Query: 215 D 215
            
Sbjct: 218 R 218


>gi|300865817|ref|ZP_07110567.1| condensin subunit Smc [Oscillatoria sp. PCC 6506]
 gi|300336183|emb|CBN55722.1| condensin subunit Smc [Oscillatoria sp. PCC 6506]
          Length = 1284

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/210 (10%), Positives = 78/210 (37%), Gaps = 11/210 (5%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E  +   ++  +++  +  +     E       +    +  ++ E++ +Q    L + ++
Sbjct: 331 EKSQFEAVLKYRRLQQQEWKLREQIEAGDRTLTDLNSQL--QSLETQIQQATAELDQLNA 388

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +    + ++  +L  +    R +   + +LE  +      ++   + +   +   E
Sbjct: 389 RVKALGESELLALQSTLVTQEAEQRQLLNRKQELETAAQQTAVQIAQTDQQIRQHRQTLE 448

Query: 208 KNAV------SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +  V      SQ+ + QQ+R   +  L+      E  N +    E + +   E  + ++ 
Sbjct: 449 QVEVEISYTNSQHGILQQQRDEAQQILDQNR---EVVNAIASTAEAWVQQQTELHHQIEI 505

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           + + +   +   A    +   L++  +++ 
Sbjct: 506 LQKTINPQRTEQATVRERADQLQRKIQEQN 535


>gi|265753708|ref|ZP_06089063.1| ABC transporter permease [Bacteroides sp. 3_1_33FAA]
 gi|263235422|gb|EEZ20946.1| ABC transporter permease [Bacteroides sp. 3_1_33FAA]
          Length = 416

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 107/314 (34%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTCSK 151
           TD I + +V       ++D E      L  K +  E     R   +  + + +  +    
Sbjct: 45  TDNIQIAEVKDDKFMEYVDVEGLVQPILTIKVNTREGGSVDRIVGEEGNMMKQGDTLLIL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                I S+         +  +     +++E KS +L+      Q ++  ++        
Sbjct: 105 TNPDLIRSIEDQRDEWEKQRITYKEKEIEMEQKSLILKQQTLQAQYEMERLR-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        +    + E +   +  N      +L+  + +  I ++L   + 
Sbjct: 157 -KSFGLDKEEFKMGIKSKAELQVSEDEYKYKLKNTALQMESLKHDSSVTLIRKEL--LRN 213

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  KL   E+  E   + +PI G + + +  +        + + +I        I 
Sbjct: 214 DLERESKKLKRAEERLEDLIVKAPIGGQLSFVKV-TPGQQVASGESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPI-ISQQDNNLQTQE 385
             ++   I  +  G  ATV +    Y     K    + ++   +D +   +   N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATVNYQGKRYPLKITKVVPEVKDRMFDVDLVFTGEMPENVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELDQPEQA 345


>gi|261378037|ref|ZP_05982610.1| macrolide-specific efflux protein MacA [Neisseria cinerea ATCC
           14685]
 gi|269145913|gb|EEZ72331.1| macrolide-specific efflux protein MacA [Neisseria cinerea ATCC
           14685]
          Length = 390

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 57/135 (42%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V+ G  + +G  +        T+ ++++
Sbjct: 42  IGQTVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQHVRKGDLIAVINSTSQTNTLNME 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     ++     + 
Sbjct: 101 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAARANAAELK 160

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 161 ALIRQTKISINTAES 175



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 26/212 (12%), Positives = 62/212 (29%), Gaps = 21/212 (9%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQ 270
           ++ L   +  +  + + L     + K        +    E      + L     +  + +
Sbjct: 101 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAARANAAELK 160

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLT 328
                    +   E       I + + GT+V              Q    IV  +   + 
Sbjct: 161 ALIRQTKISINTAESELGYTRITATMDGTVVAIPV-EEGQTVNAVQSTPTIVQLANLDMM 219

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS--------QQDNN 380
             + ++    I  VK G    + F   ++      KA ++ +DP ++           + 
Sbjct: 220 LNKMQIAEGDITKVKAGQ--DITFTILSEPDTP-IKAKLDSVDPGLTAMSLGGYNSSTDT 276

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             +  YY     + +    D  + +  G   +
Sbjct: 277 TSSAVYYYARALVPNP---DGKLAI--GMTTQ 303


>gi|225626803|ref|ZP_03784842.1| efflux transporter, RND family, MFP subunit [Brucella ceti str.
           Cudo]
 gi|254709440|ref|ZP_05171251.1| efflux transporter, RND family, MFP subunit [Brucella pinnipedialis
           B2/94]
 gi|254713141|ref|ZP_05174952.1| efflux transporter, RND family, MFP subunit [Brucella ceti
           M644/93/1]
 gi|254716505|ref|ZP_05178316.1| efflux transporter, RND family, MFP subunit [Brucella ceti
           M13/05/1]
 gi|256030934|ref|ZP_05444548.1| efflux transporter, RND family, MFP subunit [Brucella pinnipedialis
           M292/94/1]
 gi|256158981|ref|ZP_05456818.1| efflux transporter, RND family, MFP subunit [Brucella ceti
           M490/95/1]
 gi|256254339|ref|ZP_05459875.1| efflux transporter, RND family, MFP subunit [Brucella ceti B1/94]
 gi|260168069|ref|ZP_05754880.1| transporter, putative [Brucella sp. F5/99]
 gi|261218298|ref|ZP_05932579.1| efflux transporter [Brucella ceti M13/05/1]
 gi|261221497|ref|ZP_05935778.1| efflux transporter [Brucella ceti B1/94]
 gi|261316961|ref|ZP_05956158.1| efflux transporter [Brucella pinnipedialis B2/94]
 gi|261320853|ref|ZP_05960050.1| efflux transporter [Brucella ceti M644/93/1]
 gi|261757517|ref|ZP_06001226.1| efflux transporter [Brucella sp. F5/99]
 gi|265987997|ref|ZP_06100554.1| efflux transporter [Brucella pinnipedialis M292/94/1]
 gi|265997459|ref|ZP_06110016.1| efflux transporter [Brucella ceti M490/95/1]
 gi|225618460|gb|EEH15503.1| efflux transporter, RND family, MFP subunit [Brucella ceti str.
           Cudo]
 gi|260920081|gb|EEX86734.1| efflux transporter [Brucella ceti B1/94]
 gi|260923387|gb|EEX89955.1| efflux transporter [Brucella ceti M13/05/1]
 gi|261293543|gb|EEX97039.1| efflux transporter [Brucella ceti M644/93/1]
 gi|261296184|gb|EEX99680.1| efflux transporter [Brucella pinnipedialis B2/94]
 gi|261737501|gb|EEY25497.1| efflux transporter [Brucella sp. F5/99]
 gi|262551927|gb|EEZ07917.1| efflux transporter [Brucella ceti M490/95/1]
 gi|264660194|gb|EEZ30455.1| efflux transporter [Brucella pinnipedialis M292/94/1]
          Length = 383

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 27/193 (13%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-----------QRTFADEMSKLTI 282
           I E       I     E  L+ A   ++    L              +   A+    L  
Sbjct: 114 IAELDAETEQIAVAKAETALKDAQTTRQRIARLRATNTATEVQAVGAELAVANAQLALQD 173

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +    ++ + +PI G +      +  NY      + +I        I   V  +    +
Sbjct: 174 AQLALSRRMVRAPITGIVGILPVNA-GNYVTAQTSIARI-DDRSTVLIDIWVPERFAPQI 231

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G   T     +        K  I  +D ++ +    L       V  ++ +       
Sbjct: 232 KVGQPLTAESTAFPGEIY---KGRINAVDNMLDEASRTLH------VRAEVPNAED---- 278

Query: 403 IELRNGFPAEVLF 415
             LR G    V  
Sbjct: 279 -RLRAGMSFSVTI 290



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 3/105 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKS 115
           +    SG + K  V  G  + +G  +   +       +   + ++K+    R  I   ++
Sbjct: 89  VTPYSSGYMTKLHVRAGDTVKEGDLIAELDAETEQIAVAKAETALKDAQTTRQRIARLRA 148

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                  +    E A  + +  L D          +    GI  +
Sbjct: 149 TNTATEVQAVGAELAVANAQLALQDAQLALSRRMVRAPITGIVGI 193


>gi|213583441|ref|ZP_03365267.1| HlyD family secretion protein [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 225

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 66/232 (28%), Gaps = 19/232 (8%)

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           S  K     ++L ++ AVS   L+        +   L     +       I         
Sbjct: 1   SVSKRHVRSRSLSQRGAVSVQQLDDDRAAAESARAALETAKAQVSAAKAAIEAARTSIIQ 60

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                         Q +   A    +  + +   +   + +P  G + Y +         
Sbjct: 61  -------------AQTRVEAAQATERRIVAD--IDDSELKAPRDGRVQY-RVAEPGEVLS 104

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +   
Sbjct: 105 AGGRVLNMVDLSD-VYMTFFLPTEQAGLLKIGGDARLVLDAAPDLRIPATISFVASVAQF 163

Query: 374 ISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
             +  + ++ + +  + V  +I       +   ++ G P             
Sbjct: 164 TPKTVETHDERLKLMFRVKARIPPELLRQHLEYVKTGLPGMAWVRLDERVPW 215


>gi|254360807|ref|ZP_04976954.1| possible acridine efflux pump AcrA [Mannheimia haemolytica PHL213]
 gi|261492562|ref|ZP_05989115.1| putative acridine efflux pump AcrA [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261495716|ref|ZP_05992160.1| putative acridine efflux pump AcrA [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|153092281|gb|EDN73350.1| possible acridine efflux pump AcrA [Mannheimia haemolytica PHL213]
 gi|261308628|gb|EEY09887.1| putative acridine efflux pump AcrA [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261311721|gb|EEY12871.1| putative acridine efflux pump AcrA [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 401

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/125 (11%), Positives = 52/125 (41%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG++ +  V +G ++ +G  L+ F+       +   +  + N + +++  ++ +   + 
Sbjct: 87  TSGVVSRVLVTSGQRVKKGDLLVEFDSSVEIANLRASEAQLPNAKANLERYRNLIASNSA 146

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                + A  +  + L +      +   +      S +   + + + +  ++    + +E
Sbjct: 147 SKAEFDNAQSTYNQLLANIEALRATIKRRQIYAPFSGLAGIVNVNVGQYITMGTEIVRVE 206

Query: 183 NKSSL 187
           ++SS+
Sbjct: 207 DQSSM 211


>gi|152981853|ref|YP_001353483.1| CzcB family cobalt/zinc/cadmium efflux transporter membrane fusion
           protein [Janthinobacterium sp. Marseille]
 gi|151281930|gb|ABR90340.1| cobalt/zinc/cadmium efflux RND transporter, membrane fusion
           protein, CzcB family [Janthinobacterium sp. Marseille]
          Length = 422

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 58/202 (28%), Gaps = 18/202 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E    +  L L +  +E++  L       ++  L+    L E    ++  ++  +   
Sbjct: 162 RSELFAAQKRLTLAKLTYEREKKLWQEKISAEQDYLQAQQVLHETEIAVQNARQKLSALG 221

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +          +  I +P  G +V     S     ++   +  +       +    V  K
Sbjct: 222 AD-AGAAGAFNRYEIRAPFDGIVVEKHI-SLGEAVKEDANIFTLS-DLSTVWADIAVPAK 278

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  V+ G   TV+   +           +  +  ++  Q                  + 
Sbjct: 279 DLNAVRVGEKVTVKASAFDSTAT----GTVAYVGSLLGVQTRTAN-----------ARVT 323

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
            ++     R G    V   +  
Sbjct: 324 LANPQGTWRPGLFVNVEIVSNE 345



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 57/188 (30%), Gaps = 15/188 (7%)

Query: 38  LPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
             I+ ++   GEI   ++    +    +G+++      G Q+ +G  L           +
Sbjct: 103 AHIKTALVLPGEIQFNEDRTAHVVPRLAGVVQSVPANLGQQVKKGQVLAVIASTG----L 158

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++  +   +  +   K   +    +   L +   S E+  L      H T   V N  
Sbjct: 159 SEQRSELFAAQKRLTLAKLTYE----REKKLWQEKISAEQDYLQAQQVLHETEIAVQNAR 214

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD------LTMMKNLFEKNA 210
                           + Y  R   +         L    K+      L+ +  ++   A
Sbjct: 215 QKLSALGADAGAAGAFNRYEIRAPFDGIVVEKHISLGEAVKEDANIFTLSDLSTVWADIA 274

Query: 211 VSQNDLNQ 218
           V   DLN 
Sbjct: 275 VPAKDLNA 282


>gi|160875746|ref|YP_001555062.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS195]
 gi|160861268|gb|ABX49802.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS195]
 gi|315267935|gb|ADT94788.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS678]
          Length = 354

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 78/205 (38%), Gaps = 16/205 (7%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E  AV + D  Q+ +++     + ++   ++      I E       +  N     + 
Sbjct: 73  LIESLAVEEGDRVQKGQVLAVIDAKRQQYDLDRSEAEVKIIEQELNRLKKMGNKEFISAD 132

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            + + +      ++K  + E    +  +LSPI+G +V  +   + N A++   L  IV +
Sbjct: 133 SMAKLEYNLQAAIAKKDLAELQVRESRVLSPISG-VVAKRYVKAGNMAKEFGDLFYIV-N 190

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
               +    +  +Q+  +K G  A V F       +    A + +I PI+  Q       
Sbjct: 191 QDELHGIVHLPEQQLASLKLGQEAQV-FS--NQQSKIAIHAKVLRISPIVDPQSGT---- 243

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
             ++V L + +         L+ G 
Sbjct: 244 --FKVTLAVPNQEA-----RLKAGM 261



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S  SG+I+   VE G ++ +G  L   +       +D  +  +K     I+ E + L 
Sbjct: 66  VVSRISGLIESLAVEEGDRVQKGQVLAVIDAKRQQYDLDRSEAEVKI----IEQELNRLK 121

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            + NK  +   +    E  L   + K      +V    + S
Sbjct: 122 KMGNKEFISADSMAKLEYNLQAAIAKKDLAELQVRESRVLS 162


>gi|46333|emb|CAA41486.1| nolF [Sinorhizobium meliloti]
 gi|228196|prf||1718309B nolF gene
          Length = 367

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 86/287 (29%), Gaps = 30/287 (10%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q L F      T        I  V     ++L         R D+ N+  ++ +L    +
Sbjct: 10  QKLAFATTLAVTIVLSQGRAIGQVKHGSPIELAEADVSTAVRQDMANEVRIVGSLTPIRR 69

Query: 197 KDLTMM---KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             LT     + L   +   +    +  R   K +  +  +  + +           EA L
Sbjct: 70  STLTSRVSRRLLTSCSDRGRGQCRRSPRPFRKGSSRIGGDGAKSRGGCLSAQTELAEAVL 129

Query: 254 EFANYLKE-----------ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
           E    L E              D+   +     + ++++  E++     + +   G ++ 
Sbjct: 130 ERNTRLGERGAASEATRLAALADVLDLRAHVRSKQAEVSDAERSLSHAEVRAEF-GGVIR 188

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +S         +  LM IV  +    + A V   +I  ++   +  +    +       
Sbjct: 189 ARSVEEGQTVPLNTQLMTIVELN-RLEVDAGVPTSRIPLIRLKQSVELMVEGFPGRT--- 244

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           F   + +I P        +       V + + +         LR G 
Sbjct: 245 FSGEVARISPTADAGSRAV------RVFIAVDNEEGL-----LRGGM 280


>gi|301156177|emb|CBW15648.1| macrolide transporter subunit, membrane fusion protein (MFP)
           component [Haemophilus parainfluenzae T3T1]
          Length = 392

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 59/133 (44%), Gaps = 2/133 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +E +V +SG +    N V++ +  SG I K  V+ G +I +G  +   +     + ++
Sbjct: 40  GNVEKTVVASGSVE-SVNEVDVGAQASGKITKLYVKLGQEIKKGEMIADIDSTTQINTLN 98

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD-FLGKYHSTCSKVFNYG 156
            KK ++ + +  +  +K+A D   + Y+ L K +  +   L      K     +K     
Sbjct: 99  TKKAALVSYQAQLKAKKTAYDVALSSYNRLSKLYTQKATSLDSVNTAKSTLDNAKAEMEA 158

Query: 157 ISSVYRSLKMKLT 169
           I +  +  ++++ 
Sbjct: 159 IEANIKQAEIEVN 171



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 92/275 (33%), Gaps = 46/275 (16%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           I+ +Y  L  ++ +   I       + N  +  +A L S+Q  L   K  ++    S N 
Sbjct: 68  ITKLYVKLGQEIKKGEMIADIDSTTQINTLNTKKAALVSYQAQLKAKKTAYDVALSSYNR 127

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L++       S   +        N    +  +  EAN++ A                   
Sbjct: 128 LSKLYTQKATSLDSVNTAKSTLDNAKAEMEAI--EANIKQAEI----------------- 168

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAK 333
              ++   E       I +P+ GT++     S       +Q    IV  +      I+ +
Sbjct: 169 ---EVNTAETNVGYTKITAPMDGTVISVPV-SEGQTVNANQTTPTIVTIADLSKMKIKPE 224

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP------------IISQQDNNL 381
           ++   I  VK G    V F   +D +   + ++I+ +DP             +S   ++ 
Sbjct: 225 ISEGDITKVKAGQ--EVSFTILSDSQT-VYHSVIDSVDPANTTTSDSSSTSSLSSSSSST 281

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +  YY   + I      + +  LR G   E    
Sbjct: 282 TSAIYYYANVLID-----NPDRTLRIGMTTENNIK 311


>gi|145520403|ref|XP_001446057.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413534|emb|CAK78660.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2662

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 76/233 (32%), Gaps = 25/233 (10%)

Query: 66   IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +I K   +   Q+     L    + E   +   +++ ++ LR     ++        +  
Sbjct: 2098 VIDKIDFDKSIQVQDEDILNQKLEEEKLRIQKEEELKLQQLRQEQKQKEEMYQEQLQQIQ 2157

Query: 126  VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL----TRMRSIYLNRLDL 181
            + ++  E  ++QL +          K        +    + K     +++      R   
Sbjct: 2158 LEKQRIEDEKKQLEEAERIKAEGILKETQRREREILLEKEEKERLWASQLEEQQRQRALQ 2217

Query: 182  ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE--------------------- 220
            E +   L+  L   +++    +   ++  + + +L + E                     
Sbjct: 2218 EQREFELKQELEKEKQEKIKFQLQLQEKLLREQELEKLEIEKKNKAEMERLEQLKLEEEL 2277

Query: 221  RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            RI  +  LEL++ + EQ    +   EL  +   E     +E+    ++ +   
Sbjct: 2278 RIFKQKELELQKQLEEQIRKEKEQQELRIQQEKEKQRLQEELLLKQQEEELRL 2330



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 68/196 (34%), Gaps = 32/196 (16%)

Query: 121  NNKYDVLEKAFESREEQLLDFLGKY---------------HSTCSKVFNYGISSVYRSLK 165
             N  ++  K  ++  +Q LDF  +                 +  +K   +  +     + 
Sbjct: 2040 QNPEELQPKFLQTDSQQDLDFSSELECNNLNLKNNQLNTPQNNANKSSRFKKNKTIEIVI 2099

Query: 166  MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
             K+   +SI +   D+ N+      L    +++L  ++ L ++    Q    +  +   +
Sbjct: 2100 DKIDFDKSIQVQDEDILNQKLEEEKLRIQKEEELK-LQQLRQE----QKQKEEMYQEQLQ 2154

Query: 226  STLELRENIHEQKNMLRHINELYDEANLEFANYLKEI------------SRDLEQNQRTF 273
                 ++ I ++K  L     +  E  L+     +              +  LE+ QR  
Sbjct: 2155 QIQLEKQRIEDEKKQLEEAERIKAEGILKETQRREREILLEKEEKERLWASQLEEQQRQR 2214

Query: 274  ADEMSKLTILEKTREQ 289
            A +  +   L++  E+
Sbjct: 2215 ALQEQREFELKQELEK 2230


>gi|119897126|ref|YP_932339.1| membrane fusion protein [Azoarcus sp. BH72]
 gi|119669539|emb|CAL93452.1| membrane fusion protein [Azoarcus sp. BH72]
          Length = 382

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 88/284 (30%), Gaps = 20/284 (7%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            G+  ++ +      + +  R+    +T  R  YL   + +   +  + L+   Q DL  
Sbjct: 39  RGRVEASVANTRAGEVEACQRTKLATITGGRIDYLGVKEGDRVQAG-QVLMRLWQGDLRS 97

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              + E    +     +Q      +      +  E++  L     +      +       
Sbjct: 98  RAAVAEAQLATA----RQRSTEACTVAANARSEAERQAALVKRGFVSASVEEKARTEAAA 153

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ-----SFSSSNYAQQSQ 316
            +      Q        +L        +  I++P AGT+           + S     + 
Sbjct: 154 RAAGCASAQADVKTAERQLEAAGIDLNRVVIVAPFAGTVAKITGELGEISTPSPPGVPTP 213

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           P + ++      Y++A +       +  G  A + F        K F   ++++ P I+ 
Sbjct: 214 PAIDLI-DDSCLYVKAPMDEVDAPKIHPGQPARISFEALP---GKTFAGRVKRVAPYITA 269

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +   +T     V + I      +    L  G+  +V    +  
Sbjct: 270 VEKQART-----VEVDIDFANPEEARGLLV-GYSVDVEIVLETR 307



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/172 (11%), Positives = 47/172 (27%), Gaps = 20/172 (11%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVS----SSGEILNE-----------DNVVEIK 60
           S + + ++ +I ++G   W    P  I V     + G +                  ++ 
Sbjct: 4   SRRLIPVVIVIALLGAAGWWFTRPKPIVVVVHEVARGRVEASVANTRAGEVEACQRTKLA 63

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-----IDTEKS 115
           +   G I    V+ G ++  G  L+     +      + +  +   R            +
Sbjct: 64  TITGGRIDYLGVKEGDRVQAGQVLMRLWQGDLRSRAAVAEAQLATARQRSTEACTVAANA 123

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +       V      +  E+         +         + +  R L+  
Sbjct: 124 RSEAERQAALVKRGFVSASVEEKARTEAAARAAGCASAQADVKTAERQLEAA 175


>gi|78049961|ref|YP_366136.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78038391|emb|CAJ26136.1| membrane fusion protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 307

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 74/217 (34%), Gaps = 19/217 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V +            +  E +  + + +  +     L D    E A   +    ++++ 
Sbjct: 77  VVDRARYAIALEQARAALAERQATLTQLRREIARDRSLQDLVAAEDAEVRR---SNVQKA 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   A   S + + +   E+  + SP  G +   ++    +Y    +P++ ++  +    
Sbjct: 134 QAAVATAQSAVDLAQLNLERTQVRSPADGRVSD-RTVRVGDYVNAGRPVVAVL-DTGSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQD 378
           +       ++Q V  G    V+        +   ++I   I+           P ++   
Sbjct: 192 VDGYFEETRLQGVHPGQRVDVQLMGEPVTLQGHVQSIAAGIEDRYRSGSAGALPNVTPAF 251

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + ++  +   V + +  +     +++L  G  A V  
Sbjct: 252 DWVRLAQRIPVRIVLDRV---PAHVQLIAGRTATVSI 285



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/130 (10%), Positives = 43/130 (33%), Gaps = 1/130 (0%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV++    SG+++   V +   + +G  L   +       ++  + ++   +  + 
Sbjct: 43  VGADVVQVAPDVSGLVESVAVADNQPVTRGQLLFVVDRARYAIALEQARAALAERQATLT 102

Query: 112 TEKSALDFLNNKYDVLEKA-FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
             +  +    +  D++     E R   +        +  S V    ++     ++     
Sbjct: 103 QLRREIARDRSLQDLVAAEDAEVRRSNVQKAQAAVATAQSAVDLAQLNLERTQVRSPADG 162

Query: 171 MRSIYLNRLD 180
             S    R+ 
Sbjct: 163 RVSDRTVRVG 172


>gi|323974980|gb|EGB70090.1| HlyD family protein secretion protein [Escherichia coli TW10509]
          Length = 355

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|270157289|ref|ZP_06185946.1| HlyD family secretion protein [Legionella longbeachae D-4968]
 gi|269989314|gb|EEZ95568.1| HlyD family secretion protein [Legionella longbeachae D-4968]
          Length = 268

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 73/216 (33%), Gaps = 11/216 (5%)

Query: 202 MKNLFEKNAVSQNDLNQQE--RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           ++   ++  ++   + Q +  R    + L   +  +E+   L  I  +      +  +  
Sbjct: 54  VEPELKEEQIAHARVKQAQNARDAIIAKLAYAKVTYERNKKLIEIKAIQQSLLDQEKSKY 113

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
             +   L Q +   +     L   +   +Q   ++PI G +          Y   +Q ++
Sbjct: 114 DVLLAQLAQAEDDLSALSLNLKQAQWRLQQNNSVAPIDGMVFDIYYR-IGEYTHANQAVL 172

Query: 320 KIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            ++ P          V    +  ++ G         +    ++ +KA I+ I P +    
Sbjct: 173 SLLAPEDVKAIF--YVNGLDVSALQLGQQ----ISVFNAGHKESYKAQIDYISPSVEFTP 226

Query: 379 NNL-QTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             +   Q + ++  +I     + +   +  G P  +
Sbjct: 227 PVIYSDQTHEKLTYRIEAKFRTQDAFHVHPGQPVTI 262


>gi|260902658|ref|ZP_05911053.1| membrane-fusion protein [Vibrio parahaemolyticus AQ4037]
 gi|308109716|gb|EFO47256.1| membrane-fusion protein [Vibrio parahaemolyticus AQ4037]
 gi|328471592|gb|EGF42469.1| hypothetical protein VP10329_00505 [Vibrio parahaemolyticus 10329]
          Length = 368

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  +    + +  L+ T +++ I +P AG +V  ++     Y Q       IV     
Sbjct: 142 EAEANYYSLKADIESLKATIDRREIKAPFAG-VVGIRNVYLGQYIQAGS---DIVRLEDS 197

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V    I  +K      +    Y D     FK  I  I+P ++ Q   +Q Q 
Sbjct: 198 SVMRLRFTVPQTDISRIKLDQEVDIFVDAYPDQ---PFKGSISAIEPAVNVQSGLIQVQ- 253

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +++ +LR+G  A    
Sbjct: 254 ----------ADIPNSDGKLRSGMFARANI 273



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 58/161 (36%), Gaps = 2/161 (1%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G I     V  + +  SG+I K   E+G+Q+  G PL+  +       +   +  
Sbjct: 57  VIEAIGFIEPNQGV-TVANETSGVIDKIAFESGTQVEAGQPLVLLDSEVEKANLKSSQAK 115

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +          +      +   +  ++A  +      D      +   +      + V  
Sbjct: 116 LPAAEAKYKRYQGLFKKGSISKEAYDEAEANYYSLKADIESLKATIDRREIKAPFAGVVG 175

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              + L +      + + LE+ SS++R   +  Q D++ +K
Sbjct: 176 IRNVYLGQYIQAGSDIVRLED-SSVMRLRFTVPQTDISRIK 215


>gi|224823778|ref|ZP_03696887.1| efflux transporter, RND family, MFP subunit [Lutiella nitroferrum
           2002]
 gi|224604233|gb|EEG10407.1| efflux transporter, RND family, MFP subunit [Lutiella nitroferrum
           2002]
          Length = 409

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 65/210 (30%), Gaps = 22/210 (10%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           L+  S   +         +++ + + +   V++ D   Q+  +  +   L     + +  
Sbjct: 61  LKQVSVGAQVSGEVKSLKVSLGQQVKKGELVAEIDPRSQQNTLLDAEAALASKQAQLRVK 120

Query: 241 LRHINELYDEANLEFANYLKEI----------------SRDLEQNQRTFADEMSKLTILE 284
              + +   +A  + +   +E                   ++ Q Q         L    
Sbjct: 121 QAALTKADLDARRQTSMLAEEATARENVDSARASLATARAEVAQLQAEIEQARITLNTAR 180

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHV 342
                  I++PI G +V             SQ    IV  +      ++A+++   +  V
Sbjct: 181 LNLGYTKIVAPIDGVVVAVPV-EEGQTVNASQSAPTIVKIAQLDTVTVKAEISEGDVTRV 239

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           K G           D R +   A +  IDP
Sbjct: 240 KPGLPVYFTILGAPDRRYR---ATLRAIDP 266



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 53/145 (36%), Gaps = 4/145 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +E SV +SG +     V  + +  SG +K  +V  G Q+ +G  +   +     + + 
Sbjct: 46  ADLEDSVLASGAVKALKQV-SVGAQVSGEVKSLKVSLGQQVKKGELVAEIDPRSQQNTLL 104

Query: 98  LKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             + ++ + +  +  +++AL   D    +   +     +  E +        +  ++V  
Sbjct: 105 DAEAALASKQAQLRVKQAALTKADLDARRQTSMLAEEATARENVDSARASLATARAEVAQ 164

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRL 179
                    + +   R+   Y   +
Sbjct: 165 LQAEIEQARITLNTARLNLGYTKIV 189


>gi|219870310|ref|YP_002474685.1| putative acridine efflux pump AcrA, RND efflux membrane-fusion
           protein [Haemophilus parasuis SH0165]
 gi|219690514|gb|ACL31737.1| possible acridine efflux pump AcrA, RND efflux membrane-fusion
           protein [Haemophilus parasuis SH0165]
          Length = 401

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/123 (9%), Positives = 45/123 (36%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K  V++G ++ +G  L+  +       +   +  +   R + +  ++ +   +   
Sbjct: 89  GTVTKVLVKSGDKVKKGQLLVEIDSSAEQASLKATEAQLSTARANYNRYRNLVASSSASK 148

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              + A  + E+ +            +            + + + +  +I    + +E++
Sbjct: 149 AEFDNAKATYEQLVATIEATKAQIERRQIYAPFDGEAGIVNVNVGQYVTIGTGIVRVEDQ 208

Query: 185 SSL 187
           S++
Sbjct: 209 SAM 211


>gi|42522294|ref|NP_967674.1| macrolide-specific efflux protein [Bdellovibrio bacteriovorus
           HD100]
 gi|39574825|emb|CAE78667.1| probable macrolide-specific efflux protein [Bdellovibrio
           bacteriovorus HD100]
          Length = 321

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 15/111 (13%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWS---ILLP-----------IEISVSSSGEILNED 54
           +K +       +  L ++   G   W       P           +++++ S+G +  + 
Sbjct: 1   MKSSTKKLSWILGGLVVVVAAGFYLWKKEDGNAPAFREIPVTAGDLDVTILSTGTVQPK- 59

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           N +EIK+P +G I++   + G QI +G  L      E   ++D  +     
Sbjct: 60  NRLEIKAPVAGRIEQILAKEGQQIRKGQILAWMSSTERAAMLDAARAQGAA 110



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 20/206 (9%)

Query: 216 LNQQERIVYKSTLELRENIH-EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +     +  K+ LE++  +    + +L    +   +  +       E +  L+  +   A
Sbjct: 50  ILSTGTVQPKNRLEIKAPVAGRIEQILAKEGQQIRKGQILAWMSSTERAAMLDAARAQGA 109

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
            E  K + L        +++PIAGT +  ++         +  +  +   S    ++A+V
Sbjct: 110 AEYKKWSEL---YLATPVIAPIAGT-LILKNVEPGQTFTNTDAIFVM---SDRLTVKAQV 162

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               I  +K    AT+    Y         A +++I    +  +N       Y V +   
Sbjct: 163 DETDIAQIKLKEKATIVLDAYPQS---PLPATVDQIAFDATTVNNVTT----YLVDVIPD 215

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNT 420
                     +R+G  A V FT  + 
Sbjct: 216 -----KTPDFMRSGMTANVTFTIASK 236


>gi|28901335|ref|NP_800990.1| hypothetical protein VPA1480 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260362891|ref|ZP_05775760.1| multidrug resistance efflux pump [Vibrio parahaemolyticus K5030]
 gi|260880179|ref|ZP_05892534.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AN-5034]
 gi|260895296|ref|ZP_05903792.1| multidrug resistance efflux pump [Vibrio parahaemolyticus Peru-466]
 gi|260901121|ref|ZP_05909516.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AQ4037]
 gi|28809882|dbj|BAC62823.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308085802|gb|EFO35497.1| multidrug resistance efflux pump [Vibrio parahaemolyticus Peru-466]
 gi|308091891|gb|EFO41586.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AN-5034]
 gi|308109327|gb|EFO46867.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AQ4037]
 gi|308112327|gb|EFO49867.1| multidrug resistance efflux pump [Vibrio parahaemolyticus K5030]
 gi|328469272|gb|EGF40218.1| hypothetical protein VP10329_10326 [Vibrio parahaemolyticus 10329]
          Length = 376

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 75/232 (32%), Gaps = 23/232 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   ++ +   +K        +  +  + E      +A     Q++ +  +  F++ A +
Sbjct: 99  FEAEVARLEAKVKEASQGALGLESDLREAEAAVLKAQADRDKAQREFSRYQRGFDRGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + DL+ + +    +   L   I +Q+     ++      N + A  L E           
Sbjct: 159 EQDLDTRRQAYKAAEAMLDVAILQQEQAQIALDSEIGGENTQVAQLLAE----------- 207

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
                  L   E   EQ  + +P  G +                 P M  V    +TY  
Sbjct: 208 -------LRKAEFNLEQTIVRAPTDGYVTQLALRPGVMAVPLPLAPAMTFVHTEDITYTA 260

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           A      +Q +K G+ A   F     I  K F+  +  + P I +     + 
Sbjct: 261 A-FRQNSLQRLKPGFEAEFMFRA---IPGKVFRGEVIDVIPAIGESQIQARG 308



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 48/147 (32%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-----NLRCHIDTEKSALDF 119
           G + +  V+    +  G  L   + +     +   +  +K      L    D  ++    
Sbjct: 72  GRVVEVPVQANQPLKTGDILFKIDPVPFEAEVARLEAKVKEASQGALGLESDLREAEAAV 131

Query: 120 LNNKYDVLEKAFE-SREEQLLD---FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           L  + D  +   E SR ++  D   F  +   T  + +    + +  ++  +     ++ 
Sbjct: 132 LKAQADRDKAQREFSRYQRGFDRGAFTEQDLDTRRQAYKAAEAMLDVAILQQEQAQIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                   + + L A L   + +L   
Sbjct: 192 SEIGGENTQVAQLLAELRKAEFNLEQT 218


>gi|152978211|ref|YP_001343840.1| RND family efflux transporter MFP subunit [Actinobacillus
           succinogenes 130Z]
 gi|150839934|gb|ABR73905.1| efflux transporter, RND family, MFP subunit [Actinobacillus
           succinogenes 130Z]
          Length = 398

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 72/221 (32%), Gaps = 20/221 (9%)

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           +  + S Q   T+ K L +   + +      E         LR    +            
Sbjct: 80  QGSMLSAQASGTIKKILVKSGQIVKKGDVLVEFDNDVEVASLRAAEAQVPAARLTYQRYA 139

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           +    +  +       +L+  + T    ++ +  L+ T E++ I++P  G +      + 
Sbjct: 140 NLIKSQSVS-----QTELDNAKATLDQLVANVNSLKATIERRKIVAPYDG-VTGIVQVNE 193

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
             Y      +++ V       +   V+   ++++  G   T           + F A + 
Sbjct: 194 GQYISTGAEIVR-VEDVSSMKVDFSVSQNDLENLHIGQKVTATSDA---RLGETFAAKVT 249

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            I+P I++             ++ +      ++  +L +G 
Sbjct: 250 AIEPAINKSTG----------LIDVQATFEPEDGKKLLSGM 280



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/219 (12%), Positives = 72/219 (32%), Gaps = 10/219 (4%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IKK  V++G  + +G  L+ F++      +   +  +   R       + +      
Sbjct: 89  SGTIKKILVKSGQIVKKGDVLVEFDNDVEVASLRAAEAQVPAARLTYQRYANLIKS---- 144

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             V +   ++ +  L   +   +S  + +    I + Y  +   +      Y++      
Sbjct: 145 QSVSQTELDNAKATLDQLVANVNSLKATIERRKIVAPYDGVTGIVQVNEGQYISTGAEIV 204

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           +   + ++          ++NL     V+     +           +   I++   ++  
Sbjct: 205 RVEDVSSMKVDFSVSQNDLENLHIGQKVTATSDARLGETFAAKVTAIEPAINKSTGLI-- 262

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                 +A  E  +  K +S    + +     E  ++ I
Sbjct: 263 ----DVQATFEPEDGKKLLSGMFTRLRLALPTEREQIVI 297


>gi|331683152|ref|ZP_08383753.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli H299]
 gi|331079367|gb|EGI50564.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli H299]
          Length = 285

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 59  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 117

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 118 AEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 176

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +     I 
Sbjct: 177 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHASSIG 227

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 228 RAIYDQS 234



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNFYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 156


>gi|215486821|ref|YP_002329252.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O127:H6
           str. E2348/69]
 gi|312966591|ref|ZP_07780811.1| uncharacterized protein ydhJ [Escherichia coli 2362-75]
 gi|215264893|emb|CAS09279.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli O127:H6
           str. E2348/69]
 gi|312288701|gb|EFR16601.1| uncharacterized protein ydhJ [Escherichia coli 2362-75]
 gi|323187070|gb|EFZ72386.1| hypothetical protein ECRN5871_4655 [Escherichia coli RN587/1]
          Length = 285

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 59  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 117

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 118 AEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 176

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +     I 
Sbjct: 177 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHASSIG 227

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 228 RAIYDQS 234



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 13/160 (8%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +  +  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQ--SPWTRDGKIRAEQ--VSITPQVSGRIV 56

Query: 69  KFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN- 122
           +  +++   +  G  LLT +       E      L K      + + +  +      N  
Sbjct: 57  ELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFI 116

Query: 123 ---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
              + D      ++ +  +            ++    I +
Sbjct: 117 SAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRA 156


>gi|183600376|ref|ZP_02961869.1| hypothetical protein PROSTU_03942 [Providencia stuartii ATCC 25827]
 gi|188020167|gb|EDU58207.1| hypothetical protein PROSTU_03942 [Providencia stuartii ATCC 25827]
          Length = 323

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 2/170 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             +   V + S   G + +  VE G  + +G  LLT E  E T      K +    +  +
Sbjct: 34  EVDAPEVMVTSKAKGRVIERHVERGDDVKKGQLLLTLESPELTAQYAALKAARDQAKAQL 93

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                       ++     A  + + Q      +  S  S       + +  + K K   
Sbjct: 94  AQSLHGTREETIRHLQASLAQANSQYQNASREYQRLSNLSAKGYVSANELDNARKAKEVA 153

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + +   +  LE   +  R  +   QK    +    +K A  Q  L+  +
Sbjct: 154 FQQVQGAKAQLEEAKNGDR--IELRQKYEAALNEAEQKLAELQVQLDDLQ 201


>gi|17987929|ref|NP_540563.1| acriflavin resistance protein E [Brucella melitensis bv. 1 str.
           16M]
 gi|23501183|ref|NP_697310.1| transporter [Brucella suis 1330]
 gi|161618255|ref|YP_001592142.1| RND family efflux transporter MFP subunit [Brucella canis ATCC
           23365]
 gi|163842560|ref|YP_001626964.1| RND family efflux transporter MFP subunit [Brucella suis ATCC
           23445]
 gi|225851824|ref|YP_002732057.1| RND family efflux transporter [Brucella melitensis ATCC 23457]
 gi|254703645|ref|ZP_05165473.1| efflux transporter, RND family, MFP subunit [Brucella suis bv. 3
           str. 686]
 gi|256044005|ref|ZP_05446916.1| efflux transporter, RND family, MFP subunit [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|256112800|ref|ZP_05453721.1| efflux transporter, RND family, MFP subunit [Brucella melitensis
           bv. 3 str. Ether]
 gi|256264662|ref|ZP_05467194.1| efflux transporter [Brucella melitensis bv. 2 str. 63/9]
 gi|256368737|ref|YP_003106243.1| transporter, putative [Brucella microti CCM 4915]
 gi|260563365|ref|ZP_05833851.1| efflux transporter [Brucella melitensis bv. 1 str. 16M]
 gi|260567102|ref|ZP_05837572.1| efflux transporter [Brucella suis bv. 4 str. 40]
 gi|261754282|ref|ZP_05997991.1| efflux transporter [Brucella suis bv. 3 str. 686]
 gi|265990414|ref|ZP_06102971.1| efflux transporter [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994242|ref|ZP_06106799.1| efflux transporter [Brucella melitensis bv. 3 str. Ether]
 gi|17983667|gb|AAL52827.1| acriflavin resistance protein e [Brucella melitensis bv. 1 str.
           16M]
 gi|23347061|gb|AAN29225.1| transporter, putative [Brucella suis 1330]
 gi|161335066|gb|ABX61371.1| efflux transporter, RND family, MFP subunit [Brucella canis ATCC
           23365]
 gi|163673283|gb|ABY37394.1| efflux transporter, RND family, MFP subunit [Brucella suis ATCC
           23445]
 gi|225640189|gb|ACO00103.1| efflux transporter, RND family, MFP subunit [Brucella melitensis
           ATCC 23457]
 gi|255998895|gb|ACU47294.1| transporter, putative [Brucella microti CCM 4915]
 gi|260153381|gb|EEW88473.1| efflux transporter [Brucella melitensis bv. 1 str. 16M]
 gi|260156620|gb|EEW91700.1| efflux transporter [Brucella suis bv. 4 str. 40]
 gi|261744035|gb|EEY31961.1| efflux transporter [Brucella suis bv. 3 str. 686]
 gi|262765355|gb|EEZ11144.1| efflux transporter [Brucella melitensis bv. 3 str. Ether]
 gi|263001198|gb|EEZ13773.1| efflux transporter [Brucella melitensis bv. 1 str. Rev.1]
 gi|263095031|gb|EEZ18739.1| efflux transporter [Brucella melitensis bv. 2 str. 63/9]
 gi|326408317|gb|ADZ65382.1| RND family efflux transporter [Brucella melitensis M28]
 gi|326538032|gb|ADZ86247.1| efflux transporter, RND family, MFP subunit [Brucella melitensis
           M5-90]
          Length = 383

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 27/193 (13%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-----------QRTFADEMSKLTI 282
           I E       I     E  L+ A   ++    L              +   A+    L  
Sbjct: 114 IAELDAETEQIAVAKAETALKDAQTTRQRIARLRATNTATEVQAVGAELAVANAQLALQD 173

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +    ++ + +PI G +      +  NY      + +I        I   V  +    +
Sbjct: 174 AQLALSRRMVRAPITGIVGILPVNA-GNYVTAQTSIARI-DDRSTVLIDIWVPERFAPQI 231

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G   T     +        K  I  +D ++ +    L       V  ++ +       
Sbjct: 232 KVGQPLTAESTAFPGEIY---KGRINAVDNMLDEASRTLH------VRAEVPNAED---- 278

Query: 403 IELRNGFPAEVLF 415
             LR G    V  
Sbjct: 279 -RLRAGMSFSVTI 290



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 3/105 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKS 115
           +    SG + K  V  G  + +G  +   +       +   + ++K+    R  I   ++
Sbjct: 89  VTPYSSGYMTKLHVRAGDTVKEGDLIAELDAETEQIAVAKAETALKDAQTTRQRIARLRA 148

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                  +    E A  + +  L D          +    GI  +
Sbjct: 149 TNTATEVQAVGAELAVANAQLALQDAQLALSRRMVRAPITGIVGI 193


>gi|317504462|ref|ZP_07962440.1| multidrug resistance protein MexA [Prevotella salivae DSM 15606]
 gi|315664405|gb|EFV04094.1| multidrug resistance protein MexA [Prevotella salivae DSM 15606]
          Length = 359

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 59/185 (31%), Gaps = 3/185 (1%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W     +     ++   +     +E+++   GI+++  V  G Q+  G PL     +   
Sbjct: 37  WVTNTQVSKDYVAN---IESRKNIEVRAQQEGILQQVYVTEGQQVRAGQPLFRISIVGAQ 93

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +   K   +  R  +    +         +  + A       L D+          + 
Sbjct: 94  QNVARAKAEAEQARIELQNTTTLTRGQIVSPNAQKMAKAKLNAALADYKLAQIQARLCLI 153

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +   + V  SL  K+  +         L + SSL      S  + +   ++  E+N +  
Sbjct: 154 SAPFTGVIGSLPKKIGSLVQGGDLLTTLSDNSSLNVYFNISEPEYIDYQQHSAERNKLPL 213

Query: 214 NDLNQ 218
             +  
Sbjct: 214 TLILA 218


>gi|256369768|ref|YP_003107279.1| HlyD family secretion protein [Brucella microti CCM 4915]
 gi|255999931|gb|ACU48330.1| HlyD family secretion protein [Brucella microti CCM 4915]
          Length = 355

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQVEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 152


>gi|254559798|ref|YP_003066893.1| secretion protein , RND family efflux protein [Methylobacterium
           extorquens DM4]
 gi|254267076|emb|CAX22889.1| putative secretion protein precursor, putative RND family efflux
           protein [Methylobacterium extorquens DM4]
          Length = 505

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 58/174 (33%), Gaps = 16/174 (9%)

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E+   A    AN   + +R   QN       + ++    +     T  SP  G ++   +
Sbjct: 254 EINAAAAQLIANPGFDGARRRLQNLNVSEGVIDEMERTRRVPMAITWSSPRDGLVLQRTA 313

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A     L +I       ++ A V  + + +V+ G  ATVR         + F  
Sbjct: 314 V-EGMKAAAGDTLFRIG-DISTMWVLADVPERDLANVRVGQAATVRL---RSAPGRTFSG 368

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +  I P ++ +           V +++      + +  L     A+V     +
Sbjct: 369 KVGVIYPQVNPETRAT------RVRIELP-----NPDGTLLPDMYADVEIATGD 411


>gi|215486009|ref|YP_002328440.1| macrolide transporter subunit MacA [Escherichia coli O127:H6 str.
           E2348/69]
 gi|215264081|emb|CAS08423.1| macrolide transporter subunit, membrane fusionprotein (MFP)
           component [Escherichia coli O127:H6 str. E2348/69]
          Length = 371

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLVQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKINDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLVQTQAVSQQDLDNA--ATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|260824593|ref|XP_002607252.1| hypothetical protein BRAFLDRAFT_125170 [Branchiostoma floridae]
 gi|229292598|gb|EEN63262.1| hypothetical protein BRAFLDRAFT_125170 [Branchiostoma floridae]
          Length = 846

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 66/215 (30%), Gaps = 8/215 (3%)

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +G   +  E       +   +      R  +   +           +  ++  ++ E  +
Sbjct: 45  KGDLTMKLETSRDESTVQWDRPETAK-RNRVRRLEQQHALEKQGELLWTRSKVAKLETAI 103

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             L          F  G  +     +  L ++  +      LE +    +  L+  +K L
Sbjct: 104 SQLETEKKREKIEFEKGQETFRMQYERDLEQVNDLRHKLEFLEREEKQAKEELAEERKKL 163

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           T +K   EK       +   +R       EL E     ++ +  +         E     
Sbjct: 164 TTIKTQSEK------RIMGLQREKLHIQAELEELREGSRSQISSLRNQVKRLEAELEMSD 217

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E++   +Q Q       ++L  +++  ++  I +
Sbjct: 218 SELAEAQQQVQHHRGQAQARLEQVQQ-LQEDRIRA 251



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 22/220 (10%), Positives = 70/220 (31%), Gaps = 17/220 (7%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY-HSTCS 150
               +   +  +       + +   +  L  +  ++ K  +S    L  +  +   ++  
Sbjct: 399 AASRLREVESQLFASTEKTNQQADLIKKLQRRLLLVTKDRDSIRNILESYESEVTRASSD 458

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF---E 207
                 +     S +     M S+  +   L  ++S  R      + +L+ +K       
Sbjct: 459 DGLLQRLQDSEESAQRYQRHMTSLEEDLQRLNAQASEERIKAHRLESELSQLKTQTPSPA 518

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE------------- 254
            N +S  ++    + V     + ++ + E++ +   + + + + + +             
Sbjct: 519 PNPISSQEVTTLRKKVEDLEEDRQKLLEEKEILEARVEQRHLQGDFDPTKTKVVHFGLNP 578

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            A   +    +LE+ +        +L   E+      + S
Sbjct: 579 TALRRQHRQEELEKLREECEKLRQRLRAAEEGVAADILRS 618


>gi|91228867|ref|ZP_01262771.1| hypothetical protein V12G01_10651 [Vibrio alginolyticus 12G01]
 gi|91187579|gb|EAS73907.1| hypothetical protein V12G01_10651 [Vibrio alginolyticus 12G01]
          Length = 368

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 54/150 (36%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  +    + +  L+ T +++ I +P  G +V  ++     Y Q       IV     
Sbjct: 142 EAEANYFSLKADIESLKATIDRREIKAPFDG-VVGIRNVYLGQYLQAGT---DIVRLEDT 197

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V    I  +       +    Y D     FK  I  I+P ++ Q   +Q Q 
Sbjct: 198 SVMRLRFTVPQTDISRINIDQEVDIFVDAYPDQ---PFKGSISAIEPAVNVQSGLIQVQ- 253

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +++ +LR+G  A    
Sbjct: 254 ----------ADIPNSDGKLRSGMFARANI 273



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 45/135 (33%), Gaps = 5/135 (3%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G I     V  + +  SG+I K   ++G+Q+  G PL+  +       +   +  
Sbjct: 57  VIEAIGFIEPNQGV-TVANETSGVIDKIAFDSGTQVKSGQPLVLLDSEVEKANLKSSQAK 115

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +          +     L  K  + ++A++  E           S  + +    I + + 
Sbjct: 116 LPAAEAKYKRYQG----LFKKGSISKEAYDEAEANYFSLKADIESLKATIDRREIKAPFD 171

Query: 163 SLKMKLTRMRSIYLN 177
            +          YL 
Sbjct: 172 GVVGIRNVYLGQYLQ 186


>gi|78484870|ref|YP_390795.1| hypothetical protein Tcr_0525 [Thiomicrospira crunogena XCL-2]
 gi|78363156|gb|ABB41121.1| Membrane fusion protein [Thiomicrospira crunogena XCL-2]
          Length = 168

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 2/105 (1%)

Query: 57  VEIK--SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             I+  +  +G ++   V+ G Q+  G  L+  +D      +   + S++  R  +   K
Sbjct: 24  KTIQIGALVAGQVENVYVKTGQQVKPGQLLIKIDDTRYQAKLKALQASVEMTRLKLADAK 83

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             LD   + YD    A    +   L +          +    +  
Sbjct: 84  IELDQALDLYDRTVSAKRELDAAQLAYDVAQQQHLKALAELEMGQ 128


>gi|27378819|ref|NP_770348.1| efflux protein [Bradyrhizobium japonicum USDA 110]
 gi|27351968|dbj|BAC48973.1| efflux protein [Bradyrhizobium japonicum USDA 110]
          Length = 410

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 80/255 (31%), Gaps = 31/255 (12%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             ++A     Q D    +N    +  S N+   Q+     + +    N+  Q+  L    
Sbjct: 84  DTVKAGDVIAQIDPVTKQNDLRNSEASLNNYRAQKVEKEATLVLAEANLARQQATLAQRA 143

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               + +   A   K+    +   +   A   + +       +   I +PI GT++    
Sbjct: 144 TSRSDYDNADATA-KQTRAQIAALEALIAGAQAAVETARVNLDYTRITAPINGTVLA-AV 201

Query: 306 FSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                     Q    IV     +   +R +++   I  V+ G      F    D    ++
Sbjct: 202 AQEGQTVNAVQSAPTIVVLGQLETMTVRTEISEADIVKVQPGQAVY--FTILGDQDH-RY 258

Query: 364 KAIIEKIDP-------------------IISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           +A +E+I+P                     S   ++  T  YY  + K+      +  + 
Sbjct: 259 EATLEQIEPAPESIKSDSSFSSSSTSSTSSSSSSSSTSTAIYYIGVFKVP-----NRELR 313

Query: 405 LRNGFPAEVLFTAKN 419
           LR    AEV      
Sbjct: 314 LRTYMTAEVHIVIGE 328



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/142 (12%), Positives = 45/142 (31%), Gaps = 3/142 (2%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            +  +   V  SG +     +  + +  SG I    V  G  +  G  +   + +   + 
Sbjct: 45  TVSDLREEVLGSGTLKP-LRLTAVGAQVSGRITSLNVRVGDTVKAGDVIAQIDPVTKQND 103

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   + S+ N R     +++ L          +     R     D+        +K    
Sbjct: 104 LRNSEASLNNYRAQKVEKEATLVLAEANLARQQATLAQRATSRSDYDNA--DATAKQTRA 161

Query: 156 GISSVYRSLKMKLTRMRSIYLN 177
            I+++   +      + +  +N
Sbjct: 162 QIAALEALIAGAQAAVETARVN 183


>gi|330973800|gb|EGH73866.1| secretion protein HlyD [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 389

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 70/203 (34%), Gaps = 22/203 (10%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  IE +VS+ G +L   N V++ +  SG ++  +V+ G Q+ +   L   + +   +
Sbjct: 48  AEVTDIEYAVSAQG-VLQGRNQVDVGAQVSGQLQSLKVKPGDQVKKNQLLAEIDPLPARN 106

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNN-----------------KYDVLEKAFESREEQ 137
            +    V I+ L    D     L    +                   D      E++   
Sbjct: 107 ALRQAVVKIEQLTAERDATLHRLKLAESNDRRYQELGATTAVSKADQDKARFELETQRAN 166

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    + H+   +     I   Y  +   +       + +       +++    +    
Sbjct: 167 LVSLTAQLHTAGVQEEAARIKLDYTRIFAPMDGQVLAIVTQEG----QTVIADQTAPVIL 222

Query: 198 DLTMMKNLFEKNAVSQNDLNQQE 220
            +  +  +  K  VS+ D+ + +
Sbjct: 223 KMAQLDTMTVKAQVSEADVLKIK 245



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 55/198 (27%), Gaps = 14/198 (7%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK-----------NAVSQNDLNQQERIVY 224
            N++D+  + S     L     D      L  +            AV + +    ER   
Sbjct: 66  RNQVDVGAQVSGQLQSLKVKPGDQVKKNQLLAEIDPLPARNALRQAVVKIEQLTAERDAT 125

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              L+L E+   +   L     +      +    L+    +L            +     
Sbjct: 126 LHRLKLAESNDRRYQELGATTAVSKADQDKARFELETQRANLVSLTAQLHTAGVQEEAAR 185

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQHV 342
              +   I +P+ G ++              Q    I+         ++A+V+   +  +
Sbjct: 186 IKLDYTRIFAPMDGQVLAI-VTQEGQTVIADQTAPVILKMAQLDTMTVKAQVSEADVLKI 244

Query: 343 KKGYTATVRFPHYADIRE 360
           K G       P   D R 
Sbjct: 245 KPGLAIYFTIPGDPDTRY 262


>gi|327481197|gb|AEA84507.1| membrane fusion protein [Pseudomonas stutzeri DSM 4166]
          Length = 300

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 75/239 (31%), Gaps = 18/239 (7%)

Query: 12  NHPASLKRMTLLS--IIGIIGLITWSILL------------PIEISVSSSGEILNEDNVV 57
               S++R+ +L+  ++ I G + W  L             P+   V +SGE+ ++    
Sbjct: 2   PAVRSIRRLVILAIALLAIGGWLIWRQLQGPELPAYRLEARPLVQRVVASGEVDSQSLAQ 61

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL--RCHIDTEKS 115
            + S  +G++    V  G  +  G  LL   D E    +   + +++ L        + +
Sbjct: 62  -VGSEITGVVAARHVREGDAVNAGDLLLELRDDEQRARLREAEAALQQLIDSTRPQAQAT 120

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
             +  +N      +            L       ++        V    +     +    
Sbjct: 121 LREAQHNLEQASRELQRRETLFERKLLASEPLEQARRAELTARVVRDRARFAAAALAEGG 180

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                L  +  + RA L+   +    +  + +   V   DL Q  R +          I
Sbjct: 181 SEEQVLRQRLEVARANLA-RTRIHAQVDGIVQSRDVEPGDLIQPGRTLLTIARSGSSEI 238



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 61/205 (29%), Gaps = 18/205 (8%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           + + + LR   ++ Q+ +   +   +          +Q        L+ RE + E+K + 
Sbjct: 93  DEQRARLREAEAALQQLIDSTRPQAQATLREAQHNLEQ----ASRELQRRETLFERKLLA 148

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADE---MSKLTILEKTREQKTILSPIAG 298
               E    A L                    ++E     +L +      +  I + + G
Sbjct: 149 SEPLEQARRAELTARVVRDRARFAAAALAEGGSEEQVLRQRLEVARANLARTRIHAQVDG 208

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ---IQHVKKGYTATVRFPHY 355
            +   +     +  Q  + L+ I            + P     +  ++ G +A +    Y
Sbjct: 209 IVQS-RDVEPGDLIQPGRTLLTIARSGSSEI----LLPLDEKSLAPIEHGQSARIIAGAY 263

Query: 356 ADIREKKFKAIIEKIDPIISQQDNN 380
            D       A +  I P +      
Sbjct: 264 PDR---VLTAKVSFIAPSVDTARGT 285


>gi|323126753|gb|ADX24050.1| Bacteriocin export accessory protein [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 299

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 82/245 (33%), Gaps = 14/245 (5%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL------RALLSSHQKDLT 200
           +  + + N+ IS +   L     ++      +  + N+   L      +  L  +Q    
Sbjct: 9   NNQASLANHAISVITSQLDELHQKITDYEELKQAINNQEYKLSPDNPHQTALKKYQTQFQ 68

Query: 201 MMK--NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
             +  +  ++  +SQ   N  E     + L ++       N+         + +     +
Sbjct: 69  TQEDNSALKEEYLSQISQNISELESSMANLNIQR--ASTGNLSLPDTSHRIKIDSLKTQF 126

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L+  S+ L   +    +   ++       +   I++P  GTI  N  F   +       +
Sbjct: 127 LQNTSQQLTTVENQITELKDQIEQANIQLKNNIIIAPETGTIHLNSEFEGKSLIPNGSEV 186

Query: 319 MKIVPHSK---LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            +I P  +     +I   VT + +  +K+     +      + +       I+ ID   +
Sbjct: 187 AQIYPDIQKIKEVFITYYVTSEHVSLLKEKQGVRLSLEKVGN-QTLTINGTIQTIDKSAT 245

Query: 376 QQDNN 380
           + D  
Sbjct: 246 KTDQG 250


>gi|302143890|emb|CBI22751.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 84/217 (38%), Gaps = 16/217 (7%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E    +D +K   +NLR  +   + +   L      LE+  E R +++    G   +   
Sbjct: 359 EMRKELDYEKDLNRNLRLQLQKTQDSNSELIIAVRDLEEMLEPRNKEIFQLFGDIENREK 418

Query: 151 -------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                  ++    +  + + +      +     +R +LE   + L       +++   + 
Sbjct: 419 SDDLVEEQIDAKEVGVLQKKMTDLHGEIEVHRKDREELEMHMAQLALDNEVLKQEKQNIS 478

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE------ANLEFAN 257
            L +     + +L + +  +  S   ++E   + + + + I +   +      A  E   
Sbjct: 479 TLEQ---YQKQELMKIQNELSASLATIKELESQVERLEKEIKKQAQKLSESSNAVNELQM 535

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            +K + ++LE+  + F D++  +T  +  +EQ+ I +
Sbjct: 536 QVKSLEKELEKQAQGFEDDLEAMTRAKIEQEQRAIRA 572


>gi|251799760|ref|YP_003014491.1| efflux transporter RND family, MFP subunit [Paenibacillus sp.
           JDR-2]
 gi|247547386|gb|ACT04405.1| efflux transporter, RND family, MFP subunit [Paenibacillus sp.
           JDR-2]
          Length = 566

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 73/195 (37%), Gaps = 19/195 (9%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYL--KEISRDLEQNQRTFADEMSKLTIL--E 284
            + +NI + K+ +    E Y +A          K I  +++  + T  D   +L  +  +
Sbjct: 107 SINKNITKTKDQIADKQEEYKQAIGTENEEQSTKSIKDEIDDLESTIDDYNDQLAKIYED 166

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           + +E K +++PI G +  +   S  +  Q +  + +IV           +    I +VK 
Sbjct: 167 QAKEVKQVIAPIDGEVTTSDI-SVGDEVQANTTIAEIV-DYTHLEFVTSIDELDIPNVKL 224

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
             TA +       I +   +A + +I    +++  +      Y V L + D+        
Sbjct: 225 KQTAQITLSA---ITDHSLEATVSEI----AKEGTSSNGSASYSVSLLLNDID------G 271

Query: 405 LRNGFPAEVLFTAKN 419
           +  G   +     + 
Sbjct: 272 VMVGMSGQADIVTEQ 286



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 17/135 (12%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED----- 89
           +I   I+ S+S +G +        + +  SG I     + G ++ +G  L TFED     
Sbjct: 44  AIKGDIKTSISGTGSVEANS-RETVTAGKSGTIATLSFKEGDKVKKGQVLATFEDNDNYD 102

Query: 90  ----------IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
                      +T D I  K+   K      + E+ +   + ++ D LE   +   +QL 
Sbjct: 103 DQIESINKNITKTKDQIADKQEEYKQAIG-TENEEQSTKSIKDEIDDLESTIDDYNDQLA 161

Query: 140 DFLGKYHSTCSKVFN 154
                      +V  
Sbjct: 162 KIYEDQAKEVKQVIA 176


>gi|221067034|ref|ZP_03543139.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
 gi|220712057|gb|EED67425.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
          Length = 449

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 53/164 (32%), Gaps = 8/164 (4%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E       L L    + ++  L       ++  L+    L+E    +   Q+  A   
Sbjct: 189 RSELQAASQRLALARTSYAREQKLWEEKVSAEQDYLQARQTLREAEIAVSNAQQKLAANG 248

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +          +  + +P  G IV     +     Q +  +  I    +  +   +V   
Sbjct: 249 A--GGGGGALNRFELRAPFDGVIVEKHL-AVGEAVQDTTQVFTIS-DLRSVWAEMRVAAS 304

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
            +  VK G  ATV+   ++         ++  +  +I Q+    
Sbjct: 305 DLPAVKVGEKATVKATAFSSSAT----GVVAYVGALIGQETRTA 344


>gi|73539676|ref|YP_300043.1| secretion protein HlyD [Ralstonia eutropha JMP134]
 gi|72123013|gb|AAZ65199.1| Secretion protein HlyD [Ralstonia eutropha JMP134]
          Length = 425

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/288 (10%), Positives = 80/288 (27%), Gaps = 47/288 (16%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
             K  +       L  L +   S + +  + +  +   +   L +  A +Q  + Q    
Sbjct: 101 QRKAAVASKAQGRLEWLGVLEGSRVKKDEIIARIERRDVDATLAQ--ATAQVKVAQANLE 158

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           +  + L   E    +   L     +  +         K+    +  ++       +    
Sbjct: 159 LQLAELRDAEVNLRRSEQLLGPKAISVQQYDADLARFKKAQASVSNSRAAITSAQANAQA 218

Query: 283 LEKTREQKTILSPIAGTIVYNQSF-------------SSSNYAQQSQPLMKIVPHSKLTY 329
            + + +Q  I +P  G ++   +              +          +  +        
Sbjct: 219 AQVSVDQTVIRAPFDGVVLIKHANVGDNITPFSSASDTKGAVV----TIADM----DTLE 270

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A V    I  ++      ++     D+R   F   + +I P + +    +       V
Sbjct: 271 VEADVAESNIAKIRADQPCLLQLDALPDMR---FAGQVSRIVPTVDRSKATV------LV 321

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPKI 437
            ++     F D +  +     A+             +  P+ +   K 
Sbjct: 322 KVR-----FVDRDARVLPDMSAK----------IAFLSKPLANQDRKA 354


>gi|16125454|ref|NP_420018.1| HlyD family secretion protein [Caulobacter crescentus CB15]
 gi|13422528|gb|AAK23186.1| HlyD family secretion protein [Caulobacter crescentus CB15]
          Length = 354

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 72/261 (27%), Gaps = 26/261 (9%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+   +   R        L     L    ++S+  +L       +  AVS+  +  + + 
Sbjct: 26  SVTQTVVAERPFTDRIEVLGAAKGLQSVTITSNTAELITAVRFTDGQAVSRGQVLVELKA 85

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
             +        I E +  L      Y       A+         EQ+   +    + +  
Sbjct: 86  EAEDAG-----IAEARARLAQAERDYKRWKT-LADQGIAPRATAEQSLAAYETAKAVVDS 139

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI--Q 340
               +  + I +P AG +      +             IV     + IR   +      +
Sbjct: 140 ARANKLDRVIRAPFAGRV-GISDVAPGMLISPGTA---IVTLDDTSVIRVDFSVPDRYLE 195

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            ++ G     +           F+  I ++D  I      ++               F +
Sbjct: 196 TLRIGLPINAQPDALPGET---FRGRIAQLDTRIDTTTRAIK-----------ARAEFPN 241

Query: 401 NNIELRNGFPAEVLFTAKNTT 421
            N  L+ G   +V       T
Sbjct: 242 ANGRLKPGMLVKVAIDKGVRT 262


>gi|189499442|ref|YP_001958912.1| efflux transporter, RND family, MFP subunit [Chlorobium
           phaeobacteroides BS1]
 gi|189494883|gb|ACE03431.1| efflux transporter, RND family, MFP subunit [Chlorobium
           phaeobacteroides BS1]
          Length = 360

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 74/202 (36%), Gaps = 22/202 (10%)

Query: 220 ERIVYKSTLELRENIHEQK------NMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           ER +  +  E      EQ+       + R  +    +A       L+E  ++  Q ++  
Sbjct: 93  ERQLQLAFEEAGAAYAEQRSETEDLRIKRERSRNLLQAGAISRQDLEEAEKEYFQAKKLL 152

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
                +L   +    +K + SPI G ++  Q+  + +Y   +  + ++V  +    I  +
Sbjct: 153 RQRELQLKSRQNDLRKKIVRSPING-VLTLQNAKAGDYIAANTLVARVV-DTTSYMINVE 210

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    +  +K G  A +       + EK+F A + ++ P   +            V +K+
Sbjct: 211 VDELDVLRLKTGQRAAI---ALDALPEKRFSAKVSRVVPQTDKITKTS------RVYIKL 261

Query: 394 TDLAFSDNNIELRNGFPAEVLF 415
            +       I++  G  A    
Sbjct: 262 EEHV---EGIQI--GMTATANI 278


>gi|333019488|gb|EGK38770.1| multidrug resistance protein A domain protein [Shigella flexneri
           K-227]
          Length = 186

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 53/133 (39%), Gaps = 6/133 (4%)

Query: 54  DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
            N+  + S  SG I   +V +   + +G  +L  +D +    +   +  IK+ + +++  
Sbjct: 44  GNITTVASKVSGYISAIEVRDNQSVKKGDIILRLDDRDYRANVARLEAKIKSSKANLEGI 103

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++ +     +  +++ A E+ +    +   +   T         +++ + +   +   R 
Sbjct: 104 QATITM---QQSIIQSASETWQAVKHEEQKRLRDTERYEKLAQSAAISQQI---IDNARF 157

Query: 174 IYLNRLDLENKSS 186
            Y      E K++
Sbjct: 158 DYQQVAAKERKAA 170


>gi|325265791|ref|ZP_08132478.1| acriflavin resistance protein A [Kingella denitrificans ATCC 33394]
 gi|324982774|gb|EGC18399.1| acriflavin resistance protein A [Kingella denitrificans ATCC 33394]
          Length = 376

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 58/163 (35%), Gaps = 6/163 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +G +  +++V    +     I +   + G ++ +G  L   + +     +   ++++   
Sbjct: 54  TGTVAAKEDVAVGTALSGLKILEVNADVGQRVEKGQVLARLDSVNVQAALRQSEMALAKA 113

Query: 107 RCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           R ++     E        N+Y  L        ++L     +  S  + V      +    
Sbjct: 114 RSNLNARQAEWREAQATFNRYRPLANEGAVTPQELDQQRLRLESAQANVQAAR--AEIAQ 171

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           L+ +LT  R     + ++    S + +  ++    LT    LF
Sbjct: 172 LQSQLTDSRHQRA-KAEITAPVSGIISQRAAEAGALTGSDALF 213



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 16/176 (9%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL---------EFANYLKEIS 263
           Q  L Q E  + K+   L     E +      N     AN          +    L+   
Sbjct: 100 QAALRQSEMALAKARSNLNARQAEWREAQATFNRYRPLANEGAVTPQELDQQRLRLESAQ 159

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            +++  +   A   S+LT     R +  I +P++G I  +Q  + +     S  L  I+ 
Sbjct: 160 ANVQAARAEIAQLQSQLTDSRHQRAKAEITAPVSGII--SQRAAEAGALTGSDALFHII- 216

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
                 + A  T  ++  +K G  A VR       + +     I  I P +     
Sbjct: 217 QDGEMELAANATADELSVLKTGMPAKVRV----RGQHEPLSGSIRLISPQMDSGTR 268


>gi|309701156|emb|CBJ00454.1| macrolide-specific efflux protein [Escherichia coli ETEC H10407]
          Length = 371

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNFDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|304397749|ref|ZP_07379626.1| efflux transporter, RND family, MFP subunit [Pantoea sp. aB]
 gi|304354921|gb|EFM19291.1| efflux transporter, RND family, MFP subunit [Pantoea sp. aB]
          Length = 384

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 53/156 (33%), Gaps = 8/156 (5%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +    +V  ++   SG I       G ++ +G  L T +D      ++  K  +   R
Sbjct: 58  GRVEAVQSVQ-LRPRVSGYIDSVNYREGDEVKKGQVLFTIDDRSYRAALEQAKAELARAR 116

Query: 108 CHIDTEKSA-------LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 +S        +       +  E+   +  +   D L    +      N   + V
Sbjct: 117 SQASLARSESGRSEKLIGTQAISREAWEQRRSAASQAQADVLAAEAAVDMAQLNLDFTRV 176

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              +  + +R +    N +   + +S+L  L+S  Q
Sbjct: 177 TAPIDGRASRAQITAGNLVTAGDSASVLTTLVSQQQ 212


>gi|32565065|ref|NP_872028.1| abnormal DYe Filling family member (dyf-14) [Caenorhabditis elegans]
          Length = 1671

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 76/199 (38%), Gaps = 10/199 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK-------- 144
             +    ++  I++++  I T +  L    +K   L K  E    QL D L          
Sbjct: 1162 EESSRSREHEIRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHDALESKEKATGLV 1221

Query: 145  -YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +  +     +    R  ++ + + R       +L  K   L        +++T  +
Sbjct: 1222 GVQDSKHRDLEEQLDRANRERELAIGKQRRTLAENENLFRKLEQLEKEREQLMREITDER 1281

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+N  S  +L   ER    +    ++   EQ+  ++     ++E+N E  N    ++
Sbjct: 1282 RLNERNRTSLEELRVSERTWKSAMTTAKKPAEEQERAVQE-QRRWEESNHEMTNRNTALT 1340

Query: 264  RDLEQNQRTFADEMSKLTI 282
            ++ ++ +    D+++++  
Sbjct: 1341 KECDRLRVEMRDQLNRMNG 1359



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 73  ENGSQILQGTPLLTFEDIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
               + L+G       D++   L +D+ +     L+  ++TE+   D  + +        
Sbjct: 260 RETQRSLKGDVAAMKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECRAKL 319

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +   E+  +   +     + +                S     T    I     ++ENK+
Sbjct: 320 DEMAEKEAELRKELAEFQAIITAMEGEGKLNQEQFLESKNELNTLTDQIESLNSEVENKN 379

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLR 242
             +R L+++ Q+    ++N+   +        +    +     E   L E ++E+   + 
Sbjct: 380 EEIRNLMATLQEKEVHIQNVRTSSHQLTATYEEANGEIDILKAELTRLHEQVNERTRQIS 439

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             NE YD+A  +    L++++   ++       E+ ++    + +E++ 
Sbjct: 440 EANEKYDDAARKNDALLEDVAT-WQEKYEQLKMELEEMNRRGQEKEREE 487



 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 68/208 (32%), Gaps = 14/208 (6%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH---------S 147
           +  +      R   + E+S  + +  + D L +   S +  +                  
Sbjct: 229 EALRSKDTEERSRFEKERSEREKIRRESDELRETQRSLKGDVAAMKTDLDDKTLRLDMLE 288

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---N 204
           T        + +       +   +        ++  K + LR  L+  Q  +T M+    
Sbjct: 289 TERDELKKKLETEREQADQRDLEIAECRAKLDEMAEKEAELRKELAEFQAIITAMEGEGK 348

Query: 205 LFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           L ++  + S+N+LN     +     E+     E +N++  + E              +++
Sbjct: 349 LNQEQFLESKNELNTLTDQIESLNSEVENKNEEIRNLMATLQEKEVHIQN-VRTSSHQLT 407

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
              E+         ++LT L +   ++T
Sbjct: 408 ATYEEANGEIDILKAELTRLHEQVNERT 435


>gi|90425065|ref|YP_533435.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90107079|gb|ABD89116.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 358

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/355 (10%), Positives = 84/355 (23%), Gaps = 75/355 (21%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I++  V  G  +  G  L                                        
Sbjct: 59  GRIREILVNEGDFVTAGQVLAR-------------------------------------- 80

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                  ++ + +            + V      S+      + T   ++   R      
Sbjct: 81  ------MDTDQLEAQRRQAIAQHHRAIVSVDTAKSLVAQRAAERTAAIAVIAQR------ 128

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                A L S Q+ L   + L   +AVSQ  L+        +   +     +       I
Sbjct: 129 ----EAQLDSIQRKLGRSERLITTSAVSQQVLDDDRANAEGAKAAVAAAQAQLAAAEAAI 184

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           +    +                     +     + +  +        + SP  G + Y +
Sbjct: 185 SAANAQVI---------------DAGASVDATQAAVESITVDINDAILKSPRDGRVQY-R 228

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK--- 361
                        ++ +V      Y+   +   Q+  +  G    +       +      
Sbjct: 229 VVQPGEVLSAGGRVLNLVDLGD-VYMTFFLPTAQVGRIPIGAEVRLVLDAVPQVVIPAKA 287

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            F A + +  P   + +   Q   +  V   I+         +++ G P      
Sbjct: 288 TFVADVAQFTPKTVETEEERQKLMF-RVKAHISPALLKKYIQQVKTGLPGMAYVK 341


>gi|301614628|ref|XP_002936790.1| PREDICTED: switch-associated protein 70 [Xenopus (Silurana)
           tropicalis]
          Length = 563

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 76/222 (34%), Gaps = 7/222 (3%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I     ++     +        +   + LR  +  E+   + +  K   L+ A E+++
Sbjct: 272 EWIQAIQTVVNLHKFQLPPPHKEARQKRRALRKKLLAEQ---EEMEKKMKELQVANETKQ 328

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK---LTRMRSIYLNRLDLENKSSLLRALL 192
           ++L     +      +             +++    T M    L R  +E + +     L
Sbjct: 329 QELEVMRKELKEAADRAMEEERKRQETQTQLQDRFQTEMERELLIRRQMEAQVAQKSNEL 388

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
             +   +  ++ ++ K   + +D  Q  +    + L     + E+      + +L+ E  
Sbjct: 389 QQNLNRVRELEEMYRKLQEALDDEKQARQEEENARLHQARLLEEEAAKRAMLEKLHKEQE 448

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                   E  ++LEQ +      + +     +  E++ IL+
Sbjct: 449 TAIKMTEAE-KKELEQIREEKEKALQEAMQQLEQLEKERILA 489


>gi|299142100|ref|ZP_07035234.1| efflux transporter, RND family, MFP subunit [Prevotella oris C735]
 gi|298576562|gb|EFI48434.1| efflux transporter, RND family, MFP subunit [Prevotella oris C735]
          Length = 359

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 59/185 (31%), Gaps = 3/185 (1%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W     +     ++   +     +E+++   GI+++  V  G Q+  G PL     +   
Sbjct: 37  WVTNTQVSKDYVAN---IESRKNIEVRAQQEGILQQVYVTEGQQVRAGQPLFRISIVGAQ 93

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +   K   +  R  +    +         +  + A       L D+          + 
Sbjct: 94  QNVARAKAEAEQARIELQNTTTLTRGQIVSPNAQKMAKAKLNAALADYKLAQIQARLCLI 153

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +   + V  SL  K+  +         L + SSL      S  + +   ++  E+N +  
Sbjct: 154 SAPFTGVIGSLPKKIGSLVQGGDLLTTLSDNSSLNVYFNISEPEYIDYQQHSAERNKLPL 213

Query: 214 NDLNQ 218
             +  
Sbjct: 214 TLILA 218


>gi|291395493|ref|XP_002714279.1| PREDICTED: desmoplakin [Oryctolagus cuniculus]
          Length = 3053

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 79/217 (36%), Gaps = 11/217 (5%)

Query: 85   LTFEDIET-TDLIDLKK-VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L ++D+       D  K  +I  LR  +    +    L    + L++  E+  +++  F 
Sbjct: 1907 LEYDDLRRGRSEADSDKNATISELRSQLQISNNRTLELQGLLNDLQRERENLRQEIEKFQ 1966

Query: 143  GKYHSTCSKVFNYGIS--SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             +     +++         V +  +  L +++ +  ++  L+     L    ++ + +  
Sbjct: 1967 KQALEASNRIQESKTQCTQVVQERESLLVKIKVLEQDKARLQRLEDELNRAKATLEAEAR 2026

Query: 201  MMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-------NIHEQKNMLRHINELYDEANL 253
            + + L  +    QNDLNQ +    +    +R+       +  E+ ++   I  L  E   
Sbjct: 2027 VKQRLECEKQQIQNDLNQWKTQYSRKEEAIRKIESEREKSEREKNSLRSEIERLQAEIKR 2086

Query: 254  EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                  +++     + Q     E S+L        Q+
Sbjct: 2087 IEERCRRKLEDSSRETQSQLETERSRLQREIDKLRQR 2123



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 81/222 (36%), Gaps = 26/222 (11%)

Query: 93   TDLIDLKKVSIKNLRCHIDT----EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
               +  + V I +L   ++     +K + D L  + DV +     R+    D        
Sbjct: 1780 RRSLKEQAVKITSLTQQLEQASIVKKRSEDELRQQRDVSDGHLRERQRAQEDLRR----L 1835

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             S+V       +     +K   +R+ +  +  +E+KS  L       ++  ++ +NL ++
Sbjct: 1836 SSEVEALRRQLLQEQENVKQAHLRNEHFQKA-IEDKSRSLNESKIEIERLQSLTENLTKE 1894

Query: 209  NAVSQNDLN-------QQERIVYKSTLELRENIHEQKNMLR-------HINELYDEANLE 254
            + + + +L           R   ++  +    I E ++ L+        +  L ++   E
Sbjct: 1895 HLMLEEELRNLRLEYDDLRRGRSEADSDKNATISELRSQLQISNNRTLELQGLLNDLQRE 1954

Query: 255  FANYLKEI---SRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              N  +EI    +   +      +  ++ T + + RE   + 
Sbjct: 1955 RENLRQEIEKFQKQALEASNRIQESKTQCTQVVQERESLLVK 1996



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 7/195 (3%)

Query: 103  IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH--STCSKVFNYGISSV 160
            ++     +   +  L   N+         +++E++L      Y   S    V +  I+  
Sbjct: 1678 LEEENAKLQRVQYDLQKANSSATEAMGKLKAQEQELSRLRLDYERVSQERSVKDQDIARF 1737

Query: 161  YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
              SLK    + + +      L+  +S   A      ++L  M+   ++ AV    L QQ 
Sbjct: 1738 QGSLKELQVQKQKVEEELSWLKRAASEDSAKRKKLDEELEAMRRSLKEQAVKITSLTQQL 1797

Query: 221  RIVY----KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
                    +S  ELR+        LR   +   E     ++ ++ + R L Q Q      
Sbjct: 1798 EQASIVKKRSEDELRQQRDVSDGHLRE-RQRAQEDLRRLSSEVEALRRQLLQEQENVKQA 1856

Query: 277  MSKLTILEKTREQKT 291
              +    +K  E K+
Sbjct: 1857 HLRNEHFQKAIEDKS 1871


>gi|270340217|ref|ZP_06007454.2| cation efflux system protein [Prevotella bergensis DSM 17361]
 gi|270332227|gb|EFA43013.1| cation efflux system protein [Prevotella bergensis DSM 17361]
          Length = 386

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 97/298 (32%), Gaps = 24/298 (8%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +K  E+ EE  L    +   T  +V    I     +  +    + +     +D ++++++
Sbjct: 22  KKQTENSEENALKVQTQVDLTDEQVEKMNIKVGNLTEMVFDNAIEANGKLVIDPQSEATV 81

Query: 188 LRALLSSHQKDLTMMKNLFEKN----AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                 + ++ L     +  K      +S  D    +     S  + R    E     + 
Sbjct: 82  TPQTGGNIRQILVKEGQIVAKGQTIAYLSHPDFVNLQTQYLSSLNQQRYLSKEFARQTKM 141

Query: 244 INELYDEANL--EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT--ILSPIAGT 299
           + E            + LK ++ +L+             + + K   + T  I SPI GT
Sbjct: 142 MKEGVGAGKDYDRIKSELKIVNGELQMLSAQLRQMGVNPSSIRKGNPKMTVAIKSPIRGT 201

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           +      +   Y     P+MKIV ++   ++  +V  + I  +K G +   +     D  
Sbjct: 202 VEQIDVQT-GQYTTPEMPIMKIV-NTDNIFVELQVFLRDISKIKVGQSVQFKQS---DKS 256

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            K ++  +  I    + ++          V ++            L  G   +     
Sbjct: 257 GKSYRGKVYSIGKTFNNENQT--------VAVR---ANIVGERTGLIGGMYIQAQIAT 303



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 48/119 (40%), Gaps = 2/119 (1%)

Query: 41  EISVSSSGEILNEDNVV-EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + ++ ++G+++ +      +     G I++  V+ G  + +G  +      +  +L    
Sbjct: 62  DNAIEANGKLVIDPQSEATVTPQTGGNIRQILVKEGQIVAKGQTIAYLSHPDFVNLQTQY 121

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             S+   R ++  E +    +  +     K ++  + +L    G+     +++   G++
Sbjct: 122 LSSLNQQR-YLSKEFARQTKMMKEGVGAGKDYDRIKSELKIVNGELQMLSAQLRQMGVN 179


>gi|260770676|ref|ZP_05879606.1| probable RND efflux membrane fusion protein [Vibrio furnissii CIP
           102972]
 gi|260614257|gb|EEX39446.1| probable RND efflux membrane fusion protein [Vibrio furnissii CIP
           102972]
 gi|315178568|gb|ADT85482.1| hypothetical protein vfu_A00252 [Vibrio furnissii NCTC 11218]
          Length = 361

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +  +    + +  L+ +  ++ I +P AG +V  ++     Y Q       IV     
Sbjct: 135 DAEANYYSLSADIESLKASIARREIKAPFAG-VVGIRNVYLGQYLQPGT---DIVRLEDT 190

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V    I  +  G    +    Y       F   I  I+P +S Q   +Q Q 
Sbjct: 191 SVMRLRFTVPQTDISRISMGQDVNIFVDAYPAT---SFHGSITAIEPAVSVQSGLIQVQ- 246

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +++ +LR+G  A    
Sbjct: 247 ----------ADIPNSDGKLRSGMFARASI 266



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 4/115 (3%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG+I +   E+G+Q+ QG PL+  +       +   +  +   +   +  K     L  
Sbjct: 69  TSGVIDQITFESGTQVTQGQPLVMLDSDVEKANLKSSQARLPAAKAKYERYKG----LYA 124

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           K  + +++F+  E           S  + +    I + +  +          YL 
Sbjct: 125 KGSISKESFDDAEANYYSLSADIESLKASIARREIKAPFAGVVGIRNVYLGQYLQ 179


>gi|126209276|ref|YP_001054501.1| macrolide-specific efflux protein [Actinobacillus pleuropneumoniae
           L20]
 gi|126098068|gb|ABN74896.1| probable macrolide-specific efflux protein [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 258

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I +  SG IK   V+ G ++ +G  L   +       + L K  + N   ++DT+K  L 
Sbjct: 9   IGAQVSGQIKHILVQEGQKVKKGELLAVIDPRLAETELKLAKAELANASANLDTKKINLK 68

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L + ++  ++   +      +         +      I+     +           L  
Sbjct: 69  QLQSDWERHQRLIRTNATSQKETEEAKSRLNTAKAELQIAQNNLDIAKIRVEKAETELGY 128

Query: 179 LDLEN 183
            ++ +
Sbjct: 129 TEIRS 133



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 79/241 (32%), Gaps = 11/241 (4%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            ++    +  +++      L +   + K   L A++     +  +         +++ +L
Sbjct: 2   QATEQVDIGAQVSGQIKHILVQEGQKVKKGELLAVIDPRLAETELK--------LAKAEL 53

Query: 217 NQQERIVYKSTLELRENIH--EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                 +    + L++     E+   L   N    +   E  + L     +L+  Q    
Sbjct: 54  ANASANLDTKKINLKQLQSDWERHQRLIRTNATSQKETEEAKSRLNTAKAELQIAQNNLD 113

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYIRAK 333
               ++   E       I SP+  T++   + +        Q P++  + +     +  K
Sbjct: 114 IAKIRVEKAETELGYTEIRSPLDATVISVFAQNGQTLVTTQQVPVLMKLANIDTMKVNTK 173

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           ++   + H++ G   +      +D +      +++     I+    N     YY    K+
Sbjct: 174 ISEADVIHIQAGAPTSFTLLGESDSQFHGQLDMVKLAPVHITDTTENTNNAIYYYATFKV 233

Query: 394 T 394
            
Sbjct: 234 P 234


>gi|91212982|ref|YP_542968.1| hypothetical protein UTI89_C4008 [Escherichia coli UTI89]
 gi|117625768|ref|YP_859091.1| hypothetical protein APECO1_2963 [Escherichia coli APEC O1]
 gi|215488762|ref|YP_002331193.1| predicted HlyD family secretion protein [Escherichia coli O127:H6
           str. E2348/69]
 gi|218560559|ref|YP_002393472.1| HlyD family secretion protein [Escherichia coli S88]
 gi|237703239|ref|ZP_04533720.1| ABC transporter [Escherichia sp. 3_2_53FAA]
 gi|312968202|ref|ZP_07782412.1| hlyD family secretion family protein [Escherichia coli 2362-75]
 gi|91074556|gb|ABE09437.1| putative membrane protein [Escherichia coli UTI89]
 gi|115514892|gb|ABJ02967.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|215266834|emb|CAS11275.1| predicted HlyD family secretion protein [Escherichia coli O127:H6
           str. E2348/69]
 gi|218367328|emb|CAR05106.1| putative HlyD family secretion protein [Escherichia coli S88]
 gi|222035195|emb|CAP77940.1| Uncharacterized protein yhiI [Escherichia coli LF82]
 gi|226902503|gb|EEH88762.1| ABC transporter [Escherichia sp. 3_2_53FAA]
 gi|294491128|gb|ADE89884.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli IHE3034]
 gi|307628565|gb|ADN72869.1| hypothetical protein UM146_17585 [Escherichia coli UM146]
 gi|312287027|gb|EFR14937.1| hlyD family secretion family protein [Escherichia coli 2362-75]
 gi|312948044|gb|ADR28871.1| hypothetical protein NRG857_17315 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315286098|gb|EFU45536.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 110-3]
 gi|323950159|gb|EGB46042.1| HlyD family protein secretion protein [Escherichia coli H252]
 gi|323954753|gb|EGB50534.1| HlyD family protein secretion protein [Escherichia coli H263]
          Length = 355

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|28896813|ref|NP_796418.1| hypothetical protein VP0039 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838630|ref|ZP_01991297.1| membrane-fusion protein [Vibrio parahaemolyticus AQ3810]
 gi|260362652|ref|ZP_05775551.1| membrane-fusion protein [Vibrio parahaemolyticus K5030]
 gi|260877717|ref|ZP_05890072.1| membrane-fusion protein [Vibrio parahaemolyticus AN-5034]
 gi|260895634|ref|ZP_05904130.1| membrane-fusion protein [Vibrio parahaemolyticus Peru-466]
 gi|28805021|dbj|BAC58302.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149747958|gb|EDM58818.1| membrane-fusion protein [Vibrio parahaemolyticus AQ3810]
 gi|308088534|gb|EFO38229.1| membrane-fusion protein [Vibrio parahaemolyticus Peru-466]
 gi|308089907|gb|EFO39602.1| membrane-fusion protein [Vibrio parahaemolyticus AN-5034]
 gi|308113729|gb|EFO51269.1| membrane-fusion protein [Vibrio parahaemolyticus K5030]
          Length = 368

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  +    + +  L+ T +++ I +P AG +V  ++     Y Q       IV     
Sbjct: 142 EAEANYYSLKADIESLKATIDRREIKAPFAG-VVGIRNVYLGQYIQAGS---DIVRLEDS 197

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V    I  +K      +    Y D     FK  I  I+P ++ Q   +Q Q 
Sbjct: 198 SVMRLRFTVPQTDISRIKLDQEVDIFVDAYPDQ---PFKGSISAIEPAVNVQSGLIQVQ- 253

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +++ +LR+G  A    
Sbjct: 254 ----------ADIPNSDGKLRSGMFARANI 273



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 58/161 (36%), Gaps = 2/161 (1%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G I     V  + +  SG+I K   E+G+Q+  G PL+  +       +   +  
Sbjct: 57  VIEAIGFIEPNQGV-TVANETSGVIDKIAFESGTQVEAGQPLVLLDSEVEKANLKSSQAK 115

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +          +      +   +  ++A  +      D      +   +      + V  
Sbjct: 116 LPAAEAKYKRYQGLFKKGSISKEAYDEAEANYYSLKADIESLKATIDRREIKAPFAGVVG 175

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              + L +      + + LE+ SS++R   +  Q D++ +K
Sbjct: 176 IRNVYLGQYIQAGSDIVRLED-SSVMRLRFTVPQTDISRIK 215


>gi|115504041|ref|XP_001218813.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|83642295|emb|CAJ16048.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 970

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 76/220 (34%), Gaps = 18/220 (8%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E  E   +++  +     L+     EK   + + ++  VL+   E  E ++ +   +  +
Sbjct: 502 EASEKLSVLEKVERKYHALKEQHRDEKKQSEVVTSETAVLKGEKEELERKVEELQDELEA 561

Query: 148 TCSKVFNY---------GISSVYRSLKMKLTRMRSI-YLNRLDLENKSSLLRALLSSHQK 197
              +V            G S +   +  K+ + +      + DL+         L+  Q+
Sbjct: 562 FRLQVARKEHELREERVGHSQMVDEIVQKMEQQQEKSAREQEDLQKALRNSEERLARSQR 621

Query: 198 DLTMM-KNLFEKNAVSQNDLNQQERIVYKSTLELRENIH-------EQKNMLRHINELYD 249
               + + L E+ A S+  L + E    +   EL            + + ++  +     
Sbjct: 622 ATEGLERQLQEEQAHSKELLLKLEEGTLRHKEELAATRRSAATYHQQSEGVISSLKRQLR 681

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           E + +        S  L + +    DE SK   LE+   Q
Sbjct: 682 EKDTKLEALANAASEPLHRLRSQLEDERSKRARLEEQFNQ 721



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 66/190 (34%), Gaps = 14/190 (7%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  R  ++  +  LD +  +               ++   +      K+     + + R 
Sbjct: 331 RLRRAALEARQKILDEVTAQLQSSADVKVKLLRAEIESERQRADGVQKMLEEDKAVIERL 390

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRAL---LSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                    ++   R DL  K+  +  L   L   Q++L   +    K++ +  +  ++E
Sbjct: 391 RGELDVANNNVKTLRKDLSTKTKTIAKLNDNLEGTQRELAECREEVGKHSRNLAESTRRE 450

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN----QRTFADE 276
           ++             EQ+N +R + E  +E        L  +  +L       ++   + 
Sbjct: 451 KVAISRE-------KEQRNAVRQLEEQLNERERRSREELARLQEELRTMSDGYEKLIKEA 503

Query: 277 MSKLTILEKT 286
             KL++LEK 
Sbjct: 504 SEKLSVLEKV 513


>gi|110643726|ref|YP_671456.1| hypothetical protein ECP_3579 [Escherichia coli 536]
 gi|191170450|ref|ZP_03032003.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli F11]
 gi|300987383|ref|ZP_07178191.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 200-1]
 gi|110345318|gb|ABG71555.1| hypothetical protein YhiI precursor [Escherichia coli 536]
 gi|190909258|gb|EDV68844.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli F11]
 gi|300306251|gb|EFJ60771.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 200-1]
 gi|324009379|gb|EGB78598.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 57-2]
 gi|324014582|gb|EGB83801.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 60-1]
          Length = 355

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|330806894|ref|YP_004351356.1| hypothetical protein PSEBR_a219 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375002|gb|AEA66352.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 439

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 4/123 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  SV +  E++       + +P  G+I +FQV+    +  G  LL FE        D+
Sbjct: 191 PVRQSVLAPAEVVPLGG-QVVAAPLDGVIAEFQVKPNQAVKNGDLLLRFESTSLKAQADV 249

Query: 99  KKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            + ++      +             ++K D+L    E +  +    L     +  +    
Sbjct: 250 AERALGVAEAELKANSQRSFADAESSSKIDLLAARVEQKRAERNYALELLKRSEVRAERD 309

Query: 156 GIS 158
           GI+
Sbjct: 310 GIA 312



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 40/110 (36%), Gaps = 5/110 (4%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             ++L+ + ++ E+      + E   +AN + +    E S  ++        + ++    
Sbjct: 239 ESTSLKAQADVAERA---LGVAEAELKANSQRSFADAESSSKIDLLAARVEQKRAERNYA 295

Query: 284 EKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIR 331
            +  ++  + +   G  +  +         Q  + LM+I  P+     I 
Sbjct: 296 LELLKRSEVRAERDGIAVFADAERWLGKPVQTGERLMEIADPNQAELRIE 345


>gi|261211869|ref|ZP_05926156.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio sp.
           RC341]
 gi|260839219|gb|EEX65851.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio sp.
           RC341]
          Length = 364

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 55/170 (32%), Gaps = 4/170 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L T +  +    ++  ++ +KN        K+  +     
Sbjct: 77  SGRLTDITVKEGDQVKKGQLLATLDSRDAKTALEAAQLELKNTEQEYRRAKAVFEKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       GI S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEEATRKLEYTQITAPFDGIISEKVVENFAQIQANQVIMTLQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           DL +    +          +   + + E +A+     + Q R        
Sbjct: 197 DLNDLEVAIEIPHRVMIAGVRNTRAIAELSAIPNQQFDLQLRTYSTQASS 246



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 70/201 (34%), Gaps = 17/201 (8%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + +    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 90  QVKKGQLLATLDSRDAKTALEAAQLELKNTEQEYRRAKAVFEKTQAISKAELDKVTNRYD 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++    +  E   I +P  G I   +   +    Q +Q +M +   +    +  ++
Sbjct: 150 LAKNRVEEATRKLEYTQITAPFDGIISE-KVVENFAQIQANQVIMTLQDLND-LEVAIEI 207

Query: 335 TPK-QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
             +  I  V+    A        + +         ++    +Q  ++ QT   Y V+L  
Sbjct: 208 PHRVMIAGVRN-TRAIAELSAIPNQQF------DLQLRTYSTQASSDSQT---YSVVLGF 257

Query: 394 TDLAFSDNNIELRNGFPAEVL 414
            DL        +  G  A+V+
Sbjct: 258 EDL----KGFRVMPGMSAKVI 274


>gi|91774568|ref|YP_544324.1| secretion protein HlyD [Methylobacillus flagellatus KT]
 gi|91708555|gb|ABE48483.1| secretion protein HlyD [Methylobacillus flagellatus KT]
          Length = 364

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 50/142 (35%), Gaps = 3/142 (2%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +   D   Q+R        L   +  Q+  +   N+   E N    N L E+       
Sbjct: 93  LLDAEDYALQQREAESEVARLEALLLNQQRNVER-NQKLVEKNFISQNALDELETQKIAL 151

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +R      S+L  +     +  +LSPI G +   Q  S  +Y +   P+++I+  ++   
Sbjct: 152 KRQLEGAKSRLATITHNGSKTRLLSPIDGKV-EKQIVSPGDYVKVGDPILQII-SNQRLR 209

Query: 330 IRAKVTPKQIQHVKKGYTATVR 351
                       +K G    ++
Sbjct: 210 AHLPFPESLGSKLKPGLKVRLK 231



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/90 (11%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---LNN 122
            + K     G  + +G  +   +  +        +  +  L   +  ++  ++    L  
Sbjct: 73  RVLKILARPGQAVKKGDVIALLDAEDYALQQREAESEVARLEALLLNQQRNVERNQKLVE 132

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           K  + + A +  E Q +    +     S++
Sbjct: 133 KNFISQNALDELETQKIALKRQLEGAKSRL 162


>gi|82702079|ref|YP_411645.1| secretion protein HlyD [Nitrosospira multiformis ATCC 25196]
 gi|82410144|gb|ABB74253.1| Secretion protein HlyD [Nitrosospira multiformis ATCC 25196]
          Length = 384

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 64/189 (33%), Gaps = 22/189 (11%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSIL--LPIEISVSSSGEILNED-------------N 55
           +     ++   ++ I+ + G   W  +   PIE+ +++ G    E               
Sbjct: 2   QTKKTLVRFAIIIVILMVAGYAIWFAMRPAPIEVELATIGRSTVEATVVNTRAGTVTACR 61

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
             ++     G I K QV+ G ++ +G  LL   + + T   DL +  +      I  E+ 
Sbjct: 62  RAKLAPAAGGQIVKLQVKEGDRVKKGQVLLELWNTDLTAQRDLARRQL------ITAEER 115

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR-SI 174
             +          +A  +R+     F+   +   +        +   +    + R R  +
Sbjct: 116 RREACILAAHAGREAERARQLAERGFVSAQNRENADADARARQASCDATIADVKRARAQV 175

Query: 175 YLNRLDLEN 183
            +    LE 
Sbjct: 176 EVTEAGLER 184



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/253 (11%), Positives = 77/253 (30%), Gaps = 22/253 (8%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            I   ++   ++    + LL     DLT  ++L  +  ++  +     R           
Sbjct: 72  QIVKLQVKEGDRVKKGQVLLELWNTDLTAQRDLARRQLITAEE----RRREACILAAHAG 127

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              E+   L     +  +         +      +          +++ + E   E+  +
Sbjct: 128 REAERARQLAERGFVSAQNRENADADARARQASCDATIADVKRARAQVEVTEAGLERTVL 187

Query: 293 LSPIAGTIVYNQSFSSSNY------AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            +P  G IV   +     Y         + P + ++      Y+ A +       +K G 
Sbjct: 188 TAPFDG-IVALVTGELGEYTTPSPPGIPTPPAIDLI-DDSCLYVTAPMDEVDAPKLKIGQ 245

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
            A +                + ++ P +++ +   +T     V +++      +    L 
Sbjct: 246 LARITIDALPGQIFP---GKVRRVAPYVTEVEKQART-----VDIEVDFEEIPER--PLL 295

Query: 407 NGFPAEVLFTAKN 419
            G+ A+V    + 
Sbjct: 296 VGYSADVEVVIER 308


>gi|81241747|gb|ABB62457.1| putative membrane protein [Shigella dysenteriae Sd197]
          Length = 358

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 66/202 (32%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 120 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAAMEMAVKQAQIGTIDAQIKRN 179

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 180 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 238

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 239 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 291

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
                + N  LR    A+V   
Sbjct: 292 -----NPNGLLRLDMTAQVHIQ 308



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 51/138 (36%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 55  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 113

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D          K     I +
Sbjct: 114 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAAMEMAVK--QAQIGT 171

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 172 IDAQIKRNQASLDTAKTN 189


>gi|261326028|emb|CBH08854.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 970

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 76/220 (34%), Gaps = 18/220 (8%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E  E   +++  +     L+     EK   + + ++  VL+   E  E ++ +   +  +
Sbjct: 502 EASEKLSVLEKVERKYHALKEQHRDEKKQSEVVTSETAVLKGEKEELERKVEELQDELEA 561

Query: 148 TCSKVFNY---------GISSVYRSLKMKLTRMRSI-YLNRLDLENKSSLLRALLSSHQK 197
              +V            G S +   +  K+ + +      + DL+         L+  Q+
Sbjct: 562 FRLQVARKEHELREERVGHSQMVDEIVQKMEQQQEKSAREQEDLQKALRNSEERLARSQR 621

Query: 198 DLTMM-KNLFEKNAVSQNDLNQQERIVYKSTLELRENIH-------EQKNMLRHINELYD 249
               + + L E+ A S+  L + E    +   EL            + + ++  +     
Sbjct: 622 ATEGLERQLQEEQAHSKELLLKLEEGTLRHKEELAATRRSAATYHQQSEGVISSLKRQLR 681

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           E + +        S  L + +    DE SK   LE+   Q
Sbjct: 682 EKDTKLEALANAASEPLHRLRSQLEDERSKRARLEEQFNQ 721



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 66/190 (34%), Gaps = 14/190 (7%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  R  ++  +  LD +  +               ++   +      K+     + + R 
Sbjct: 331 RLRRAALEARQKILDEVTAQLQSSADVKVKLLRAEIESERQRADGVQKMLEEDKAVIERL 390

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRAL---LSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                    ++   R DL  K+  +  L   L   Q++L   +    K++ +  +  ++E
Sbjct: 391 RGELDVANNNVKTLRKDLSTKTKTIAKLNDNLEGTQRELAECREEVGKHSRNLAESTRRE 450

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN----QRTFADE 276
           ++             EQ+N +R + E  +E        L  +  +L       ++   + 
Sbjct: 451 KVAISRE-------KEQRNAVRQLEEQLNERERRSREELARLQEELRTMSDGYEKLIKEA 503

Query: 277 MSKLTILEKT 286
             KL++LEK 
Sbjct: 504 SEKLSVLEKV 513


>gi|226947309|ref|YP_002802400.1| putative macrolide efflux transporter, RND family, MFP subunit
           [Clostridium botulinum A2 str. Kyoto]
 gi|226840858|gb|ACO83524.1| putative macrolide efflux transporter, RND family, MFP subunit
           [Clostridium botulinum A2 str. Kyoto]
          Length = 353

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 88/238 (36%), Gaps = 15/238 (6%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +NK   L       + ++ +   + +  ++ + D+++ E     + +E    I ++K + 
Sbjct: 57  KNKKEYLGGQAKIKKVNVKVGDKVKKGQSLLKFDMSELENDRQVAQMEYDNAISQKKALK 116

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
              N   ++ N   ++ ++++   +   +        K+   E+T         I G + 
Sbjct: 117 SQKNSEQNKMNSITSSQIEQVENSVRLAELKLESVNDKINESEETIAD------IDGIVT 170

Query: 302 YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
              + +    A Q QPL+ +V +     +   +       VKKG    V+        +K
Sbjct: 171 EVNAQAGGISAGQGQPLV-VVENVDDLKVAVSLGKYDSTKVKKGMKVFVK------NDDK 223

Query: 362 KFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           K++A ++ I P   +           +  L        +N+ +LR GF  +V      
Sbjct: 224 KYEAKVDFIAPTAKKTIKEAGGGN--DTTLDCEIYLSKNNSKDLRVGFDVDVDILLGE 279



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 53/162 (32%), Gaps = 11/162 (6%)

Query: 51  LNEDNVVEIKSPFSGI--IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
           +   N  E      G   IKK  V+ G ++ +G  LL F+  E  +   + ++   N   
Sbjct: 54  VVSKNKKE---YLGGQAKIKKVNVKVGDKVKKGQSLLKFDMSELENDRQVAQMEYDNAIS 110

Query: 109 HIDTEKSALDFLNNK------YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
                KS  +   NK        + +     R  +L           S+     I  +  
Sbjct: 111 QKKALKSQKNSEQNKMNSITSSQIEQVENSVRLAELKLESVNDKINESEETIADIDGIVT 170

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            +  +   + +     L +      L+  +S  + D T +K 
Sbjct: 171 EVNAQAGGISAGQGQPLVVVENVDDLKVAVSLGKYDSTKVKK 212


>gi|254432125|ref|ZP_05045828.1| transporter, MFP family [Cyanobium sp. PCC 7001]
 gi|197626578|gb|EDY39137.1| transporter, MFP family [Cyanobium sp. PCC 7001]
          Length = 308

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 74/217 (34%), Gaps = 21/217 (9%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-----------AVSQNDLNQQERIV 223
            L RLD   +   L A ++       + + L ++              + + L  Q R+V
Sbjct: 57  ALGRLDPRGEIRSLAAPITGIGGSPRITRLLVQEGERVAPGQLLAVFDTADPLQAQRRLV 116

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                 LR  +  Q+  +     L   +    +  L     +L + +    + +++   +
Sbjct: 117 EARIANLRSRVSVQERDIARYRSL-SRSGAIPSGELDTRETNLLELKGQLQEALAERDRI 175

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP-LMKIVPHSK-LTYIRAKVTPKQIQH 341
           +   +   + +PI GT++   +       + +   ++ +    +    I    +   I  
Sbjct: 176 DADLKLTELRAPIGGTVLRLHAR-VGE--RPTDDGVLDLGASDRMEALIEVYES--DIDR 230

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           V+ G T T          E      + +I P + Q+D
Sbjct: 231 VRVGQTVT--LTSENGGFEGTLSGRVLRISPQVRQRD 265



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 84/253 (33%), Gaps = 9/253 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGI-----IKKFQVENGSQILQGTPLLTFEDIE-TTDL 95
            +V++ G +     +  + +P +GI     I +  V+ G ++  G  L  F+  +     
Sbjct: 53  EAVAALGRLDPRGEIRSLAAPITGIGGSPRITRLLVQEGERVAPGQLLAVFDTADPLQAQ 112

Query: 96  IDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L +  I NLR  +  ++  +     L+    +     ++RE  LL+  G+     ++ 
Sbjct: 113 RRLVEARIANLRSRVSVQERDIARYRSLSRSGAIPSGELDTRETNLLELKGQLQEALAER 172

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                      L+  +         R+        +  L +S + +  +     + + V 
Sbjct: 173 DRIDADLKLTELRAPIGGTVLRLHARVGERPTDDGVLDLGASDRMEALIEVYESDIDRVR 232

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
                            L   +      +R  + L  +   +    + E+  +L+     
Sbjct: 233 VGQTVTLTSENGGFEGTLSGRVLRISPQVRQRDVLETDPTGDVDARIVEVRVELDPADAQ 292

Query: 273 FADEMSKLTILEK 285
              + + L ++ +
Sbjct: 293 RVRQRTGLKVIAR 305


>gi|170289417|ref|YP_001739655.1| chromosome segregation protein SMC [Thermotoga sp. RQ2]
 gi|281412999|ref|YP_003347078.1| chromosome segregation protein SMC [Thermotoga naphthophila RKU-10]
 gi|170176920|gb|ACB09972.1| chromosome segregation protein SMC [Thermotoga sp. RQ2]
 gi|281374102|gb|ADA67664.1| chromosome segregation protein SMC [Thermotoga naphthophila RKU-10]
          Length = 1170

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 79/186 (42%), Gaps = 5/186 (2%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E +  +D  +   +  +  ++  +     +   Y+   K  E  E++  + L ++    
Sbjct: 312 VELSTRLDELEKRREEYKKRLEEMEYIFKGVMGDYERKAKELEEFEKEKENLLSRFSEKE 371

Query: 150 SKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            +       IS + + +      +  I     DLE +  +    + + +++L   K+ F+
Sbjct: 372 KEFLRVRDEISKLEKQILKLENELLRIGETLEDLEKRRKITENQILTRRRELEDKKSEFK 431

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKE-ISR 264
           + +    +L+++ER + +    +RE + E +  +R +N   D  E  L    + KE I R
Sbjct: 432 EISKRVEELDEEERKLTEELNAVRERLEEIEGEIRRVNLEIDAKEKRLREIQFEKEMIER 491

Query: 265 DLEQNQ 270
           D+ + +
Sbjct: 492 DMREYR 497



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 57/172 (33%), Gaps = 6/172 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL------EKAFESREEQLLDFLGKYH 146
            +     +++++  + ++D  K  L     +   L       + F+    QL +    Y+
Sbjct: 164 REKKKETELNLERTKANLDRVKDVLFERERQMKSLYLKAKRAERFKEYTAQLEELQKIYY 223

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               K     +       K    ++++I    ++LE K S LR+      +++     L 
Sbjct: 224 GNVFKRERKKLEFYQEEEKKTNEKIKNIQKELVELETKWSTLRSEFGEMDQEIERYTKLL 283

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           E     QNDL + +        +      E    L  + +  +E        
Sbjct: 284 EDYKKRQNDLVEMKGFYSSKLADSENRYVELSTRLDELEKRREEYKKRLEEM 335



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 85/244 (34%), Gaps = 12/244 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCH 109
             +  +++K       ++ +        +   L +   E     +   L +  +  L   
Sbjct: 664 VFERRIKLKHLE----QEMEETEKQIEEKRDELASLKTEQENLKNQEKLVQRELFELSRK 719

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             + K+ L  +    + L++  E+ E+ L+++  K     ++     I      LK    
Sbjct: 720 SSSTKTVLSEILRSINQLQEEVENLEKLLVEYRAKEEGLNAR--REKIFEEIDELKQNRE 777

Query: 170 R-MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
              +S+     +LE +  +L  L          + NL E     + ++    +++ +   
Sbjct: 778 NLQKSLTEYSEELEKEKKILDELNEKIFTLRAEVGNLLETKDRYEKEMRDTGKMIERIAR 837

Query: 229 E---LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           E   ++  +   +  + +  +   E   E  +  KE+    E  +   + +  K+  L++
Sbjct: 838 ETEDIKLQMTSLEEEMENYRKFIREHEREIEHLKKEMDSVFEAMKLHRSGKEEKMRELQE 897

Query: 286 TREQ 289
              +
Sbjct: 898 VENR 901


>gi|160873776|ref|YP_001553092.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS195]
 gi|160859298|gb|ABX47832.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS195]
 gi|315266002|gb|ADT92855.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS678]
          Length = 410

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 64/202 (31%), Gaps = 26/202 (12%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++  +   E+   K+  +L +           +  + D    E     K+   +L +N 
Sbjct: 116 VTKGQVIA-EQDNTKAKADLDKAKSTLALAKTKLERIEDLLIKEPFALAKQDVDELRENV 174

Query: 271 RTF-ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               AD   K   +        I +P  G +    S S  +       L+ +   +    
Sbjct: 175 NLADADFRQKQATMNDYL----IKAPFDGQLTSF-SQSIGSQIGAGTALVTLYSLNP--- 226

Query: 330 IRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
           +  +  ++       +KG    V    Y +   K FK ++  + P + +           
Sbjct: 227 VEVRYAISQNDFGKGQKGQKVNVTVEAYGN---KVFKGLVNYVAPAVDESSG-------- 275

Query: 388 EVILKITDLAFSDNNIELRNGF 409
              +++   A  +   +L  G 
Sbjct: 276 --RVEV-HAALDNPEFKLAPGM 294



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 44/114 (38%), Gaps = 18/114 (15%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--------- 117
           I      NG ++ +G  +   ++ +    +D  K ++   +  ++  +  L         
Sbjct: 105 ISAIHFSNGDKVTKGQVIAEQDNTKAKADLDKAKSTLALAKTKLERIEDLLIKEPFALAK 164

Query: 118 ---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
              D L    ++ +  F  ++  + D+L K        F+  ++S  +S+  ++
Sbjct: 165 QDVDELRENVNLADADFRQKQATMNDYLIKAP------FDGQLTSFSQSIGSQI 212


>gi|83595029|ref|YP_428781.1| secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
 gi|83577943|gb|ABC24494.1| Secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
          Length = 381

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 67/210 (31%), Gaps = 19/210 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S   + + + +V     E R  + +       ++ +                 +L+  + 
Sbjct: 88  SGQRVKKGDLLVRLDDGEERGEL-DAVRAQAELSRITAGRARRLVQSAAGTRANLDDAEA 146

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYI 330
                ++ +  LE    +KT+ +P  G ++  ++     Y    Q L+ +      +   
Sbjct: 147 QLRVNLATIGQLEARVAKKTVTAPFDG-VLGVRAVDLGEYVTAGQTLVDL--QDLSVILA 203

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V+ K +  V  G  A +          + F+  I+ I P +                
Sbjct: 204 DFSVSQKDLGRVAVG--AKLTLTT-DAWPGRAFEGTIKAIAPKVDANTG----------- 249

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + + +  F + +  LR G  A++       
Sbjct: 250 MAVVEGRFDNPDGALRPGMFAKLAVLRAER 279



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 50/146 (34%), Gaps = 1/146 (0%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           ++ + G +   + V  + +  +GI++    E+G ++ +G  L+  +D E    +D  +  
Sbjct: 58  TIPAVGTLRAINGV-TVGAAVAGIVETISFESGQRVKKGDLLVRLDDGEERGELDAVRAQ 116

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            +  R      +  +         L+ A       L            K        V  
Sbjct: 117 AELSRITAGRARRLVQSAAGTRANLDDAEAQLRVNLATIGQLEARVAKKTVTAPFDGVLG 176

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLL 188
              + L    +     +DL++ S +L
Sbjct: 177 VRAVDLGEYVTAGQTLVDLQDLSVIL 202


>gi|322500753|emb|CBZ35830.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 1665

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 66/224 (29%), Gaps = 18/224 (8%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE---SREEQLLDFL 142
             ED        ++ +  +  R     EK   +         E A +     EEQ +   
Sbjct: 459 ELEDQREAYEAQMQALEAEAERARAQQEKREEELRRAHEMATEYARDRLKEMEEQCVSAE 518

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLT---RMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               S   ++     +   +    + +   R+  +   + D+EN       L S H++++
Sbjct: 519 AALRSREEELVKKQRAIEEKMRAAEASSRCRIDELQRQQKDMENALKEKERLTSMHEREM 578

Query: 200 TMMKNLFEKNAVS------------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                  E+N  +               +   E    +   ++ + I E +         
Sbjct: 579 RHKYKQAEENLRAMEKRNFQMEEEWAAKVRALEATAKQREEDVAQRIREAQGAQCKAEAA 638

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 E      ++  +  + Q   A + ++L    +   + T
Sbjct: 639 VRRKEEELQRRWIQVDNEARRLQSEVAAKEAELKRRVQEANRST 682



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 64/195 (32%), Gaps = 2/195 (1%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
               +   ++    K + +NLR          +    K   LE   + REE +   + + 
Sbjct: 569 RLTSMHEREMRHKYKQAEENLRAMEKRNFQMEEEWAAKVRALEATAKQREEDVAQRIREA 628

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-KN 204
                K             +  +         + ++  K + L+  +    +      + 
Sbjct: 629 QGAQCKAEAAVRRKEEELQRRWIQVDNEARRLQSEVAAKEAELKRRVQEANRSTEQREEE 688

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E+   ++ +L+++ER   +  LE+ E + +   +        +    E  N   E   
Sbjct: 689 LNERLRKAEYELSRRERETAQKLLEV-EALQQATELQSETTRAKERTMKEAHNVRTESLE 747

Query: 265 DLEQNQRTFADEMSK 279
            LE   +   +E+ K
Sbjct: 748 ALEAQLQQRQEELRK 762



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 72/205 (35%), Gaps = 2/205 (0%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +  K+  ++     +D E   L       +   K       +  +   +  +   
Sbjct: 634 KAEAAVRRKEEELQRRWIQVDNEARRLQSEVAAKEAELKRRVQEANRSTEQREEELNERL 693

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYL-NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +   Y +S   R    KL  + ++     L  E   +  R +  +H      ++ L  + 
Sbjct: 694 RKAEYELSRRERETAQKLLEVEALQQATELQSETTRAKERTMKEAHNVRTESLEALEAQL 753

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              Q +L +Q   V +          EQ+  L+  +E   +A  ++   + +   +L + 
Sbjct: 754 QQRQEELRKQFDEVMQMKRAWNAQHAEQRQKLQAEHEAALQAVKQWETDVSQREMELRRQ 813

Query: 270 QRTFADEMSKLTILEKTREQKTILS 294
               A ++ +   ++  ++Q  +L+
Sbjct: 814 NDELAGKL-RAQEMQLEKQQMMLLA 837



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 75/208 (36%), Gaps = 11/208 (5%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            L++L+++  + +R + + E+  ++   +      +   + ++     L +     S +  
Sbjct: 1298 LLELEEMDQRKMREYAEREQRLVEMAEHLKMRQARINTNAQDLFQSLLQRSAEQQSALAE 1357

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-- 212
                    SL+      R   L        +  ++ L+  H++ +   K+  ++ A    
Sbjct: 1358 AHEELERVSLQRTKYMARERQLIEQARHGNADAMQQLVKLHEEYVESEKHQLKRRARRLE 1417

Query: 213  ------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISR 264
                  +  L +QE  +++  L++      +  +     EL  +A      A + +   R
Sbjct: 1418 EEEAHNKQRLAEQEAEIHRYLLDIEAEDVRRNALSHQGQELMRKAEERLSKAQFKEAALR 1477

Query: 265  DL-EQNQRTFADEMSKLTILEKTREQKT 291
            DL  Q      +   +   +E T  +K 
Sbjct: 1478 DLARQIHLEAMESEEQARAMETTLRRKE 1505



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 15/186 (8%)

Query: 99   KKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +V     R  + D E   L  L ++ DVL     +R E  L    +        F    
Sbjct: 1226 TRVKDDAARQRLTDEEAQRLRNLQHEGDVL-----ARREDCLAAERERVEQRVLDFESYQ 1280

Query: 158  SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
             +    L  +   ++   L   +++ +   +R      Q+ + M ++L       +    
Sbjct: 1281 RAQMTELSRQEQEVKGYLLELEEMDQRK--MREYAEREQRLVEMAEHL-------KMRQA 1331

Query: 218  QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            +           L +   EQ++ L   +E  +  +L+   Y+    + +EQ +   AD M
Sbjct: 1332 RINTNAQDLFQSLLQRSAEQQSALAEAHEELERVSLQRTKYMARERQLIEQARHGNADAM 1391

Query: 278  SKLTIL 283
             +L  L
Sbjct: 1392 QQLVKL 1397


>gi|281180520|dbj|BAI56850.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 355

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLARRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|262199504|ref|YP_003270713.1| efflux transporter RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
 gi|262082851|gb|ACY18820.1| efflux transporter, RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
          Length = 447

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 71/204 (34%), Gaps = 21/204 (10%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           A+   ++           + L   +   K     ++ +      E      E  RD+   
Sbjct: 124 ALDSAEVRAALAAARARMVGLEGELELAKRQYERLSGVGFPTISEPERERYE--RDVTTL 181

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           + + A + +++   +    Q T+ +P +G +V ++      +    QP++ +V       
Sbjct: 182 EASLATQRAEVQRAQVQLAQHTLRAPFSG-VVSSRLVDPGAWVSVGQPVLGLVALED-LE 239

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I A+V+ +    ++ G  A VR        E + + I+  +DP                +
Sbjct: 240 ILAQVSDRLAGRIEVGGRAQVR--SGDSQAEAEIRGIVGALDPETRT------------M 285

Query: 390 ILKITDLAFSDNNIELRNGFPAEV 413
            +++  +        L  G   +V
Sbjct: 286 RVRLVPVERP---AWLLAGMAVDV 306



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 35/104 (33%), Gaps = 2/104 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN--N 122
           G +   QV  G  + +G  LL  +  E    +   +  +  L   ++  K   + L+   
Sbjct: 103 GHVLNVQVREGDAVKKGQVLLALDSAEVRAALAAARARMVGLEGELELAKRQYERLSGVG 162

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              + E   E  E  +        +  ++V    +     +L+ 
Sbjct: 163 FPTISEPERERYERDVTTLEASLATQRAEVQRAQVQLAQHTLRA 206


>gi|284040840|ref|YP_003390770.1| efflux transporter RND family, MFP subunit [Spirosoma linguale DSM
           74]
 gi|283820133|gb|ADB41971.1| efflux transporter, RND family, MFP subunit [Spirosoma linguale DSM
           74]
          Length = 356

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 57/183 (31%), Gaps = 12/183 (6%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             + + + +      E+   + + +                +A+        L+      
Sbjct: 87  QSVRKGQLLATLDLTEINAQVSQAQLANEKAERDLSRVKSLYADTAA-TLEQLQNATTGT 145

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH-SKLTYIRA 332
           +     LTI +  R    I S + GT+   +  ++  +      +  I  +      +R 
Sbjct: 146 SVAKQNLTIAQFNRNYAQIRSTVDGTVTR-KVANAGEFVAPGASIYLISSNRRSDWVVRV 204

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            V+ K    ++ G  A++    Y     K F   + ++       +        YEV ++
Sbjct: 205 GVSDKDWARLRLGNRASISLDAYP---GKTFNGTVTELAQAADPVNKL------YEVEVR 255

Query: 393 ITD 395
           I  
Sbjct: 256 IDP 258



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 44/139 (31%), Gaps = 17/139 (12%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSP-----FSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           L P+   V +   ++    V   +         GII +  VE G  + +G  L T +  E
Sbjct: 44  LTPVSSVVRAE-PVIASGLVSSAQEARLSFKIGGIIDRMFVEEGQSVRKGQLLATLDLTE 102

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
               +          +  +  EK+  D    K    + A  +  EQL +           
Sbjct: 103 INAQVS---------QAQLANEKAERDLSRVKSLYADTA--ATLEQLQNATTGTSVAKQN 151

Query: 152 VFNYGISSVYRSLKMKLTR 170
           +     +  Y  ++  +  
Sbjct: 152 LTIAQFNRNYAQIRSTVDG 170


>gi|224071233|ref|XP_002194915.1| PREDICTED: CAP-GLY domain containing linker protein 1 isoform 2
           [Taeniopygia guttata]
          Length = 1400

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 69/198 (34%), Gaps = 6/198 (3%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +  K+  + +   ++       D L  +  VL++ F S  ++  +       T  K+  
Sbjct: 778 ELQGKEQKLLDFEKNLSAVNQVKDSLEKELQVLKEKFTSAADEAENVQQAMQETVKKLNQ 837

Query: 155 YG-----ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                  +SS    LK  LT M      R + E +    +A L +   ++          
Sbjct: 838 KEEQFALMSSELEQLKSSLTEMEGKLREREEREQQLMEAKAKLENDIAEIMKSSGDSSAQ 897

Query: 210 AVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
               ND  +  ER + +  LEL +   +   + +++ +   +A       LK    +L+ 
Sbjct: 898 LTRMNDELRLKERQLEQIQLELTKANEKAAQLEKNVEQTTQKAEQSQQETLKIHQAELKT 957

Query: 269 NQRTFADEMSKLTILEKT 286
            Q    D   ++   +  
Sbjct: 958 LQDQLTDMKKQIESSQHQ 975


>gi|218674039|ref|ZP_03523708.1| efflux cation transporter protein [Rhizobium etli GR56]
          Length = 337

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 61/163 (37%), Gaps = 6/163 (3%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +V +SG +      V         I    V+ GS + +G  L+          +  ++ 
Sbjct: 28  ETVPASGWLKPWQEAVIASETSGLRITDVLVDVGSVVTKGQTLVRLSQESVLADLRKQEA 87

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           +++N +  +   K+  D           + E   E L D      S  S+       +  
Sbjct: 88  AVENAKASLSKAKANADRARQLRPSGALSDEKIVEYLADEQTATASLASE------EAAL 141

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            S K+KL +     ++   + ++S+ L A++S+  +   M++ 
Sbjct: 142 DSEKIKLAQTTITAVDDGLITSRSADLGAVVSAGTELFRMVRQ 184



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 54/164 (32%), Gaps = 12/164 (7%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           DL +QE  V  +   L +         R +      ++ +   YL +          + A
Sbjct: 81  DLRKQEAAVENAKASLSKAKANADRA-RQLRPSGALSDEKIVEYLADEQT----ATASLA 135

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
            E + L   +    Q TI +   G I   +S            L ++V   +    +A++
Sbjct: 136 SEEAALDSEKIKLAQTTITAVDDGLITS-RSADLGAVVSAGTELFRMV-RQQRVEWQAEI 193

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + + +  + +G +  +          +     +  + P +S   
Sbjct: 194 SARYLLRISEGLSVKI-----NGPDGQVIDGKVRLVGPSVSTDT 232


>gi|170751484|ref|YP_001757744.1| RND family efflux transporter MFP subunit [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658006|gb|ACB27061.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           radiotolerans JCM 2831]
          Length = 427

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 61/187 (32%), Gaps = 12/187 (6%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            A SQ    +   +  K  LE  + + +  N    + E    A       L      L+ 
Sbjct: 148 QARSQIVQAEAANLEAKQALERAQALAKTGNATAAVLEQRVSAAQGAEGRLAAARGGLQS 207

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            Q   A   +    +   R +  I +P AG +    +   +      +PL +++      
Sbjct: 208 AQADLATARAAGAEIALRRARTDIRAPEAGIVNRRTARIGATATAAGEPLFRLI-ARGEI 266

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +  +V    +  +  G  A++          ++    + ++ P + +           +
Sbjct: 267 ELEGEVPETSLARIHVGNPASLDLD-----DGRRLAGKVRRVYPEVDRATRLG------K 315

Query: 389 VILKITD 395
           V +++ D
Sbjct: 316 VRIRLGD 322



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/256 (8%), Positives = 74/256 (28%), Gaps = 8/256 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE-----DIETT 93
            I      +G ++  D ++         I    VE G ++ +G  L           E +
Sbjct: 75  EIVERAVVTGTLVPRDEILVSPEVEGLRITDLLVEEGDRVTKGQVLAKLSLEMIVTQEAS 134

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +   + +     ++      ++    L  K  +      ++       + +   + ++  
Sbjct: 135 NAAAIARAEAAIVQARSQIVQAEAANLEAKQALERAQALAKTGNATAAVLEQRVSAAQGA 194

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +++    L+     + +      ++  + +          +   + +      A + 
Sbjct: 195 EGRLAAARGGLQSAQADLATARAAGAEIALRRARTDI---RAPEAGIVNRRTARIGATAT 251

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
                  R++ +  +EL   + E      H+         +      ++ R   +  R  
Sbjct: 252 AAGEPLFRLIARGEIELEGEVPETSLARIHVGNPASLDLDDGRRLAGKVRRVYPEVDRAT 311

Query: 274 ADEMSKLTILEKTREQ 289
                ++ + +    +
Sbjct: 312 RLGKVRIRLGDDPALR 327


>gi|170719855|ref|YP_001747543.1| hypothetical protein PputW619_0669 [Pseudomonas putida W619]
 gi|169757858|gb|ACA71174.1| conserved hypothetical protein [Pseudomonas putida W619]
          Length = 439

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/122 (11%), Positives = 37/122 (30%), Gaps = 1/122 (0%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  SV +  E++     V       G++ +F V+   ++  G  L+ F+        D+
Sbjct: 191 PVRQSVLAPAEVVPRGGWVVAAPLD-GVVAEFLVKPNQRVTAGDLLVRFDATALKAQADV 249

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
              ++      +           +    L+      E++  +    +             
Sbjct: 250 AARTLGVAEAELKVSAQRAFTDADSSARLDLLAARVEQKRAELDYAHQLLARSEIRAERD 309

Query: 159 SV 160
            +
Sbjct: 310 GI 311



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 85/267 (31%), Gaps = 13/267 (4%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E+AF + E+ LL  LG+ ++   +  N       R  + +L  + +  L  L L  + S+
Sbjct: 137 EQAFNAAEQALLVQLGETYAHAWQALNPVRPWRLRWPRRRLLAVLAAALLLLLLPVRQSV 196

Query: 188 LRALLSSHQKDLTMMKNL---FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           L       +    +   L     +  V  N       ++ +      +   +       +
Sbjct: 197 LAPAEVVPRGGWVVAAPLDGVVAEFLVKPNQRVTAGDLLVRFDATALKAQADVAARTLGV 256

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT-IVYN 303
            E   + + + A    + S  L+        + ++L    +   +  I +   G  +  +
Sbjct: 257 AEAELKVSAQRAFTDADSSARLDLLAARVEQKRAELDYAHQLLARSEIRAERDGIAVFAD 316

Query: 304 QSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
               +    Q  + LM++  P      +   +       ++ G    +       +    
Sbjct: 317 AERWTGKPVQTGERLMQLADPVQAELRLE--LPVGDAIALQPGAEVAL------FLDSDP 368

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEV 389
               + +++    +   N   Q  Y +
Sbjct: 369 LHRHVAQLERAAYEAQTNAAGQLAYRL 395


>gi|116750237|ref|YP_846924.1| RND family efflux transporter MFP subunit [Syntrophobacter
           fumaroxidans MPOB]
 gi|116699301|gb|ABK18489.1| efflux transporter, RND family, MFP subunit [Syntrophobacter
           fumaroxidans MPOB]
          Length = 444

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 70/201 (34%), Gaps = 17/201 (8%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE-QKN 239
           +E    L R   S +  D+   K   E+   S+  + + E  + +   +L +   +  + 
Sbjct: 90  VEQGMVLARIDSSLYAADVATTKAQVEQ---SKAAVIRAEADLVQMQAKLFQAERDWNRA 146

Query: 240 MLRHINELYDEANLEFANYLKEISRD--------LEQNQRTFADEMSKLTILEKTREQKT 291
                +E   +++ + A    E+++         + Q Q   +   + +T  ++  +  T
Sbjct: 147 KKLGPSEALSQSDFDAAQSAYEVAKANVGVAKASILQAQNAVSQAQAVMTKAQQNLDYCT 206

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQ--SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           I SP+ G I+  +            +  L  I    K   +   V    I ++  G    
Sbjct: 207 IRSPVRGVIIDRRVNIGQTVVSSLNAPSLFLIAKDLKRLQVWVAVNEADIGNIVPGQAVV 266

Query: 350 VRFPHYADIREKKFKAIIEKI 370
                Y     + F+  + K+
Sbjct: 267 FTVDAYP---GQVFQGEVGKV 284



 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 62/165 (37%), Gaps = 17/165 (10%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKF-------QVENGSQILQGTPLLTFEDIETTDL 95
           ++S++G +  E  VV + +  +G I +F        ++ GS + QG  L   +       
Sbjct: 49  TISATGTVEPE-EVVNVGAQVAGRILEFGQDGSGKTIDYGSIVEQGMVLARIDSSLYAAD 107

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   K  +         E+S    +  + D+++   +  + +      K       +   
Sbjct: 108 VATTKAQV---------EQSKAAVIRAEADLVQMQAKLFQAERDWNRAKKLGPSEALSQS 158

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
              +   + ++    +     + L  +N  S  +A+++  Q++L 
Sbjct: 159 DFDAAQSAYEVAKANVGVAKASILQAQNAVSQAQAVMTKAQQNLD 203


>gi|146281077|ref|YP_001171230.1| membrane fusion protein [Pseudomonas stutzeri A1501]
 gi|145569282|gb|ABP78388.1| membrane fusion protein [Pseudomonas stutzeri A1501]
          Length = 407

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 58/165 (35%), Gaps = 5/165 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V+ G  +  G  L   +    T  +   +  ++  +    T  S +    ++ 
Sbjct: 108 GRLLQIDVDEGDFVAAGQVLAQMDIQVLTAQLSQAQAQVRQAQNATRTAHSQVSLRISEK 167

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E     R+ +L     +Y  T + V    +    + L   L  ++S         ++
Sbjct: 168 ATAEAVVHQRQAELTAAQKRYARTETLVRRNALPQ--QKLDDDLAALQSSQAALSAARSQ 225

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
               +A + + Q  +   ++  E    +Q  + + +  +  S L+
Sbjct: 226 VLSSQAAIDAAQSQVIEAESSVE---AAQASVERLQADIEDSRLK 267


>gi|306816164|ref|ZP_07450302.1| hypothetical protein ECNC101_06119 [Escherichia coli NC101]
 gi|305850560|gb|EFM51017.1| hypothetical protein ECNC101_06119 [Escherichia coli NC101]
          Length = 355

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|258622163|ref|ZP_05717189.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258585487|gb|EEW10210.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 376

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 72/233 (30%), Gaps = 25/233 (10%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   ++ +   +K        +     + +       A     Q++    K  +++ A +
Sbjct: 99  FEADVARLRAKVKEASQGALGLESTLKEAQAAVLKAVAERDKAQREFDRYKRGYDRGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  ++   +    +   L   + + K     I                 +  ++     T
Sbjct: 159 EQQMDTTRQAFKAAQAALE--VAQSKQEQAQIT----------------LDSEVGGENTT 200

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS--NYAQQSQPLMKIVPHSKLTYI 330
            A  +++L   E   EQ  + +P  G +           +      P+M  V   +  Y 
Sbjct: 201 VAQLLAELRKAEFNLEQTEVRAPTDGYVTQLALR-PGMMSVPLPLAPVMTFVHTEEKIYT 259

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            A      +Q ++ G+ A   F        K FK  + ++ P I +     + 
Sbjct: 260 AA-FRQNSLQRLQPGFEAEFLFRALP---GKVFKGEVIEVLPAIGESQIQARG 308



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/148 (12%), Positives = 47/148 (31%), Gaps = 9/148 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G +    V+    + QG  L   + +     +   +  +K        L   +   ++A+
Sbjct: 72  GRVIDVPVKANQPLTQGDVLFRIDPVPFEADVARLRAKVKEASQGALGLESTLKEAQAAV 131

Query: 118 DFLNNKYDVLEKAFE--SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                + D  ++ F+   R      F  +   T  + F    +++  +   +     ++ 
Sbjct: 132 LKAVAERDKAQREFDRYKRGYDRGAFTEQQMDTTRQAFKAAQAALEVAQSKQEQAQITLD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMK 203
                     + L A L   + +L   +
Sbjct: 192 SEVGGENTTVAQLLAELRKAEFNLEQTE 219


>gi|239625406|ref|ZP_04668437.1| efflux transporter [Clostridiales bacterium 1_7_47_FAA]
 gi|239519636|gb|EEQ59502.1| efflux transporter [Clostridiales bacterium 1_7_47FAA]
          Length = 519

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 72/246 (29%), Gaps = 16/246 (6%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            DLE +  + +        +                   Q+  + +    +L  +    +
Sbjct: 206 TDLEREVQIAQNAYDLAVNNKQEKDKEAALGYEKAVQDFQKASLDHSRNSQLFASGDISQ 265

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK--LTILEKTREQKTILSPI 296
             +       ++A      Y  E  R           E ++  L   ++  E   I S I
Sbjct: 266 MEMEASANALNDARRAMEGYTVENGRGRADKSYDIQIENARFDLEKKKEELENTQIKSTI 325

Query: 297 AGTIVYNQSFSSSNY---AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
            GT+V   S     +    +  +P+  I  + +   +  KV+   I  VK G  A +   
Sbjct: 326 DGTVVRVNS-KVGQFADKVEDDKPIFSI-ENLEQLELEIKVSEFSIGKVKVGQEAVI--S 381

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
               +        + KI P   ++             +  T +     + +L  G  A+ 
Sbjct: 382 A-DILDGGTVNGEVIKISPTGEEKGGGSTE------RVIPTTIRVDGQDTKLIAGITAKA 434

Query: 414 LFTAKN 419
               + 
Sbjct: 435 ELLIRE 440



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 13/169 (7%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI--- 103
           SG +   D+V  + +  + I+    V+ G Q+ +   L   +  +    + + + +    
Sbjct: 164 SGPVSGTDSVDVVSNIHAEIVT-MNVKEGDQVKKDQVLAVLDSTDLEREVQIAQNAYDLA 222

Query: 104 ------KNLRCHIDTEKSALDFLNNKYDVLE--KAFESREEQLLDFLGKYHS-TCSKVFN 154
                 K+    +  EK+  DF     D     + F S +   ++     ++   ++   
Sbjct: 223 VNNKQEKDKEAALGYEKAVQDFQKASLDHSRNSQLFASGDISQMEMEASANALNDARRAM 282

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            G +      +   +    I   R DLE K   L         D T+++
Sbjct: 283 EGYTVENGRGRADKSYDIQIENARFDLEKKKEELENTQIKSTIDGTVVR 331


>gi|215397680|gb|AAM98022.4| Abnormal dye filling protein 14, isoform d, partially confirmed by
            transcript evidence [Caenorhabditis elegans]
          Length = 1575

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 76/199 (38%), Gaps = 10/199 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK-------- 144
             +    ++  I++++  I T +  L    +K   L K  E    QL D L          
Sbjct: 1066 EESSRSREHEIRSMKARISTLELHLREKESKLAHLRKEIEVLHGQLHDALESKEKATGLV 1125

Query: 145  -YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                +  +     +    R  ++ + + R       +L  K   L        +++T  +
Sbjct: 1126 GVQDSKHRDLEEQLDRANRERELAIGKQRRTLAENENLFRKLEQLEKEREQLMREITDER 1185

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+N  S  +L   ER    +    ++   EQ+  ++     ++E+N E  N    ++
Sbjct: 1186 RLNERNRTSLEELRVSERTWKSAMTTAKKPAEEQERAVQE-QRRWEESNHEMTNRNTALT 1244

Query: 264  RDLEQNQRTFADEMSKLTI 282
            ++ ++ +    D+++++  
Sbjct: 1245 KECDRLRVEMRDQLNRMNG 1263



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 84/229 (36%), Gaps = 11/229 (4%)

Query: 73  ENGSQILQGTPLLTFEDIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
               + L+G       D++   L +D+ +     L+  ++TE+   D  + +        
Sbjct: 164 RETQRSLKGDVAAMKTDLDDKTLRLDMLETERDELKKKLETEREQADQRDLEIAECRAKL 223

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +   E+  +   +     + +                S     T    I     ++ENK+
Sbjct: 224 DEMAEKEAELRKELAEFQAIITAMEGEGKLNQEQFLESKNELNTLTDQIESLNSEVENKN 283

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLR 242
             +R L+++ Q+    ++N+   +        +    +     E   L E ++E+   + 
Sbjct: 284 EEIRNLMATLQEKEVHIQNVRTSSHQLTATYEEANGEIDILKAELTRLHEQVNERTRQIS 343

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             NE YD+A  +    L++++   ++       E+ ++    + +E++ 
Sbjct: 344 EANEKYDDAARKNDALLEDVAT-WQEKYEQLKMELEEMNRRGQEKEREE 391



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 68/208 (32%), Gaps = 14/208 (6%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH---------S 147
           +  +      R   + E+S  + +  + D L +   S +  +                  
Sbjct: 133 EALRSKDTEERSRFEKERSEREKIRRESDELRETQRSLKGDVAAMKTDLDDKTLRLDMLE 192

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---N 204
           T        + +       +   +        ++  K + LR  L+  Q  +T M+    
Sbjct: 193 TERDELKKKLETEREQADQRDLEIAECRAKLDEMAEKEAELRKELAEFQAIITAMEGEGK 252

Query: 205 LFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           L ++  + S+N+LN     +     E+     E +N++  + E              +++
Sbjct: 253 LNQEQFLESKNELNTLTDQIESLNSEVENKNEEIRNLMATLQEKEVHIQN-VRTSSHQLT 311

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
              E+         ++LT L +   ++T
Sbjct: 312 ATYEEANGEIDILKAELTRLHEQVNERT 339


>gi|167622542|ref|YP_001672836.1| RND family efflux transporter MFP subunit [Shewanella halifaxensis
           HAW-EB4]
 gi|167352564|gb|ABZ75177.1| efflux transporter, RND family, MFP subunit [Shewanella
           halifaxensis HAW-EB4]
          Length = 470

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/279 (11%), Positives = 87/279 (31%), Gaps = 13/279 (4%)

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
                + + D    +    +      E +  D    + +  ++   +GI      L +  
Sbjct: 93  EASAHEDSHDHDAEEVKAKDDGHGHDEAEKKDDGHGHGAEEAEEDVHGIELTAAQLALAK 152

Query: 169 TRMRSIYLNRLDLENKSSLL-------RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             +  +      LE+ ++            ++       + +N+     V++ D+     
Sbjct: 153 IEVAQLSEQTFSLEDVATATIVVDRDRTVTIAPQVDVRVLKRNVVPGQEVNKGDILLTLG 212

Query: 222 --IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
              V ++  +      E   + R        +    A    E+ R   +  +    ++  
Sbjct: 213 GVAVAQAQADYINAAAEWSRVKRMSTSAVSASRRLMAQVDAELKRATLEAMKMTPAQIKA 272

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L    +T     +++PI+G +  + +            LM++       ++ A++TP Q 
Sbjct: 273 LANAPETIGSYQLIAPISGRVQQDIAL-LGQIVPAGTALMQLT-DESHLWVEAELTPTQA 330

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           + V  G    V+        E        ++D +   + 
Sbjct: 331 EKVSIGSKTVVKVG--DKSMEGTIIGRSHELDSVTRTEQ 367


>gi|330981801|gb|EGH79904.1| secretion protein HlyD [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 391

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 67/203 (33%), Gaps = 22/203 (10%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  +E +V + G +L+  N V++ +  SG ++  +V+ G  + +   L   + +   +
Sbjct: 50  AEVTDMEYAVMAQG-VLHGRNQVDVGAQVSGQLQSLKVKPGDMVKKNQLLAEIDPLPARN 108

Query: 95  LIDLKKVSIKNLRC-----------------HIDTEKSALDFLNNKYDVLEKAFESREEQ 137
            +    V I+ L                         S         D      E++   
Sbjct: 109 ALRQAVVKIEQLTAERDATLHKLKLAESNDRRYQALGSTTAVSKADQDKARFELEAQRAN 168

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    +  +   +     I   Y  +   +       + +       +++   ++    
Sbjct: 169 LVSLTAQLQTARVQEEAARIKLDYTRIFAPMDGQVLAIVTQEG----QTVIADQMAPVIL 224

Query: 198 DLTMMKNLFEKNAVSQNDLNQQE 220
            +  +  +  K  VS+ D+ + +
Sbjct: 225 KMAQLDTMTVKAQVSEADVLKIK 247



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 71/261 (27%), Gaps = 22/261 (8%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK-----------NAVSQNDLNQQERIVY 224
            N++D+  + S     L     D+     L  +            AV + +    ER   
Sbjct: 68  RNQVDVGAQVSGQLQSLKVKPGDMVKKNQLLAEIDPLPARNALRQAVVKIEQLTAERDAT 127

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              L+L E+   +   L     +      +    L+    +L            +     
Sbjct: 128 LHKLKLAESNDRRYQALGSTTAVSKADQDKARFELEAQRANLVSLTAQLQTARVQEEAAR 187

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHV 342
              +   I +P+ G ++              Q  P++  +       ++A+V+   +  +
Sbjct: 188 IKLDYTRIFAPMDGQVLAI-VTQEGQTVIADQMAPVILKMAQLDTMTVKAQVSEADVLKI 246

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFS 399
           K G       P   D R       IE      + Q           +Y  +  + +L   
Sbjct: 247 KPGLAVYFTIPGDPDKRYNATLKAIEPGPVDAASQSGATGENSKAVFYNALFDVPNLES- 305

Query: 400 DNNIELRNGFPAEVLFTAKNT 420
                      A V    +  
Sbjct: 306 ----RFYIDMTANVRIVLEAK 322


>gi|319637793|ref|ZP_07992559.1| hypothetical protein HMPREF0604_00182 [Neisseria mucosa C102]
 gi|317400948|gb|EFV81603.1| hypothetical protein HMPREF0604_00182 [Neisseria mucosa C102]
          Length = 1161

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|289665617|ref|ZP_06487198.1| transport protein [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 162

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 49/145 (33%), Gaps = 13/145 (8%)

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                E   + S I G +  +++     +       M IVP   L  + A     Q+  +
Sbjct: 1   ARVAVEDTRLTSRIHGRV-GDKTVQVGQFLGAGTRTMTIVPQESLYLV-ANFKETQVGLM 58

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKIT 394
           + G  A +     + ++       +E + P    Q         T  + +V+    ++I 
Sbjct: 59  RPGQPAEIEVDALSGVK---LHGKVESLSPGTGSQFALLPPENATGNFTKVVQRVPVRIR 115

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
            LA  +    L  G   EV    ++
Sbjct: 116 VLAGDEARKVLVPGMSVEVTVDTRS 140


>gi|284047614|ref|YP_003397953.1| efflux transporter, RND family, MFP subunit [Acidaminococcus
           fermentans DSM 20731]
 gi|283951835|gb|ADB46638.1| efflux transporter, RND family, MFP subunit [Acidaminococcus
           fermentans DSM 20731]
          Length = 356

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 77/264 (29%), Gaps = 27/264 (10%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           +  +   R+  + R DL    S   AL +    D+           + Q  + + + +  
Sbjct: 34  QEAVAATRTDAVQRGDLRKTISATGALKALDNVDINSKIT----GRIVQVYVTENQHVTA 89

Query: 225 KSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKE----ISRDLEQNQRTFADEMSK 279
              L +L +   +    ++    +  +A  E    L E         +  +  +    ++
Sbjct: 90  GQALVKLDDTSLKATQEMKRAALVDKQATYERDQALLEQGAIAQSVFDTAEANYRVAKAE 149

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS----QPLMKIVPHSKLTYIRAKVT 335
                       I +PI G ++  +               Q LM  V +     I   V 
Sbjct: 150 YEQATSNVNDTVISTPIDGYVIG-KPTPVGQTVSSGISTPQVLMS-VANLDKMQIYLMVD 207

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
              I  +K+G T       Y +     FK  I  I    +  +N      YY   + +  
Sbjct: 208 ESDIGQIKQGQTVEFTVDTYPNET---FKGTISLIGRSATTTNN----VNYYTCYVDV-- 258

Query: 396 LAFSDNNIELRNGFPAEVLFTAKN 419
               ++  +L     A        
Sbjct: 259 ---ENSEGKLLPTMTARANVIVDE 279



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 53/119 (44%), Gaps = 5/119 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  ++S++G +   DNV +I S  +G I +  V     +  G  L+  +D       ++K
Sbjct: 50  LRKTISATGALKALDNV-DINSKITGRIVQVYVTENQHVTAGQALVKLDDTSLKATQEMK 108

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           + ++ + +   + +++ L+    +  + +  F++ E        +Y    S V +  IS
Sbjct: 109 RAALVDKQATYERDQALLE----QGAIAQSVFDTAEANYRVAKAEYEQATSNVNDTVIS 163


>gi|265752331|ref|ZP_06088124.1| membrane fusion efflux protein [Bacteroides sp. 3_1_33FAA]
 gi|263237123|gb|EEZ22593.1| membrane fusion efflux protein [Bacteroides sp. 3_1_33FAA]
          Length = 364

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 83/242 (34%), Gaps = 20/242 (8%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNML 241
             S ++  +     + +   + + +   + +   LN  E  V  + +  R+   +   M 
Sbjct: 66  QISGIIDEVYKEAGQKIKKGEVIAKVKVIPELGQLNSAESRVRLAEINARQGETDFARMK 125

Query: 242 R--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           +      +  E   +    +K+   +L+  +         +T  + +     I S I G 
Sbjct: 126 KLFESKLISSEEYEKSEVAVKQAREELQTAKDNLEIVKEGITKNKASFSSTLIRSTIDGL 185

Query: 300 IVYNQSFSSSNYA-----QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           I+     + ++            +  +   +     R  +   ++  + +G    +    
Sbjct: 186 ILDVPVKAGNSVIMSNTFNDGTTIATVANMND-LIFRGNIDETEVGRIHEGMPVKITLGA 244

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
             ++   +F A +E I P   +++   Q    +E+   IT      ++I +R+G+ A   
Sbjct: 245 LQNM---EFDAQLEYISPKGVEENGANQ----FEIKAAIT----VPDSITIRSGYSANAE 293

Query: 415 FT 416
             
Sbjct: 294 IV 295



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 3/143 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  ++ +  ++G+I   D +  IK   SGII +   E G +I +G  +   + I    
Sbjct: 40  AEITDLKKTTVATGKIEPRDEI-LIKPQISGIIDEVYKEAGQKIKKGEVIAKVKVIPELG 98

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            ++  +  ++     I+  +   DF   K     K   S E +  +   K      +   
Sbjct: 99  QLNSAESRVR--LAEINARQGETDFARMKKLFESKLISSEEYEKSEVAVKQAREELQTAK 156

Query: 155 YGISSVYRSLKMKLTRMRSIYLN 177
             +  V   +        S  + 
Sbjct: 157 DNLEIVKEGITKNKASFSSTLIR 179


>gi|237809205|ref|YP_002893645.1| secretion protein HlyD family protein [Tolumonas auensis DSM 9187]
 gi|237501466|gb|ACQ94059.1| secretion protein HlyD family protein [Tolumonas auensis DSM 9187]
          Length = 359

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 48/158 (30%), Gaps = 2/158 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+   V  G  +  G PL   +        D      +     +   ++ +       
Sbjct: 60  GRIEDILVREGDFVSAGQPLARMQLETLEAQRDEAFAMREQAEHSVTAAQAQVALREADV 119

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +     RE +L     +     S+  +   ++  + L     R+R         + +
Sbjct: 120 VAAQALVGQRESELDAAQRRLK--RSQTLSQEGAASIQELDDDRARVRGAQATLAASKAQ 177

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           ++  RA + + +  L   ++       S N +    R 
Sbjct: 178 TAAARAAVEAAKAQLVGARSSVSAATASINRIEADIRD 215


>gi|148560489|ref|YP_001258315.1| putative transporter [Brucella ovis ATCC 25840]
 gi|148371746|gb|ABQ61725.1| putative transporter [Brucella ovis ATCC 25840]
          Length = 383

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 27/193 (13%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-----------QRTFADEMSKLTI 282
           I E       I     E  L+ A   ++    L              +   A+    L  
Sbjct: 114 IAELDAETEQIAVAKAETALKDAQTTRQRIARLRATNTATEVQAVGAELAVANAQLALQD 173

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +    ++ + +PI G +      +  NY      + +I        I   V  +    +
Sbjct: 174 AQLALSRRMVRAPITGIVGILPVNA-GNYVTAQTSIARI-DDRSTVLIDIWVPERFAPQI 231

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G   T     +        K  I  +D ++ +    L       V  ++ +       
Sbjct: 232 KVGQPLTAESTAFPGEIY---KGRINAVDNMLDEASRTLH------VRAEVPNAED---- 278

Query: 403 IELRNGFPAEVLF 415
             LR G    V  
Sbjct: 279 -RLRAGMSFSVTI 290



 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 3/105 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKS 115
           +    SG + K  V  G  + +G  +   +       +   + ++K+    R  I   ++
Sbjct: 89  VTPYSSGYMTKLHVRAGDTVKEGDLIAELDAETEQIAVAKAETALKDAQTTRQRIARLRA 148

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                  +    E A  + +  L D          +    GI  +
Sbjct: 149 TNTATEVQAVGAELAVANAQLALQDAQLALSRRMVRAPITGIVGI 193


>gi|90021401|ref|YP_527228.1| acriflavin resistance protein [Saccharophagus degradans 2-40]
 gi|89951001|gb|ABD81016.1| secretion protein HlyD [Saccharophagus degradans 2-40]
          Length = 363

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 53/139 (38%), Gaps = 7/139 (5%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
             +++SG +     +  + +   G+IK  QVE G ++ +G  L T +D      + L + 
Sbjct: 107 EVLNASGYVTPRL-IATVSAETMGLIKSVQVEEGMKVEKGQVLATLDDAVAQVNLKLAQA 165

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            +      +++ ++ LD  N            ++  L  F      T ++     +SS  
Sbjct: 166 QLNAQLARLESMQTDLDESN------RVLKRVKQMALSGFSSDAEITRAQTNVDKLSSGL 219

Query: 162 RSLKMKLTRMRSIYLNRLD 180
            S    +   R  Y  + +
Sbjct: 220 TSAIADVEVARMQYAAQKE 238



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 64/212 (30%), Gaps = 25/212 (11%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLEFANY-LKEISRDLEQ 268
           ++Q  LN Q   +     +L E+    K + +  ++    +A +  A   + ++S  L  
Sbjct: 162 LAQAQLNAQLARLESMQTDLDESNRVLKRVKQMALSGFSSDAEITRAQTNVDKLSSGLTS 221

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP-------LMKI 321
                     +    ++  +   I +P +G +V  ++         S         +  I
Sbjct: 222 AIADVEVARMQYAAQKERVDDHIIRAPFSG-VVTVKNAQPGEIVSPSAAGGYTRTGICTI 280

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V       I   V    I+ V            Y +       A +  I P   +    +
Sbjct: 281 V-DMDSLEIEVDVNEAFIRKVVADQPVIANLDAYPNW---DIPARVIAIIPAADRAKATV 336

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
                  V ++I +      +  +      +V
Sbjct: 337 ------RVRIRIDE-----KDERILPDMGVKV 357


>gi|3252880|gb|AAC24207.1| myosin heavy chain isoform A [Loligo pealei]
          Length = 1935

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/215 (11%), Positives = 73/215 (33%), Gaps = 2/215 (0%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +T D +  K   ++  +  +  E   L     +        E ++      + ++   C+
Sbjct: 1401 QTADTLHSKCAGLEKAKSRLQGELEDLAIDVERSSAHANNLEKKQRNFDKVVSEWQHKCN 1460

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  + +  +  +     +  +     ++ +  + LR    +   ++  + +   +  
Sbjct: 1461 D-LQAELENAQKEARSYSAELFRVRAQCEEVGDTVASLRRENKNLADEIHDLTDQLGEGG 1519

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             + ++L +  + +     EL+  + E +  L         A LE +   +EI R L++ +
Sbjct: 1520 RNTHELEKARKHLALEKEELQAALEEAEGALEQEEAKVMRATLEISQIRQEIDRRLQEKE 1579

Query: 271  RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              F D   +         Q ++ +   G     + 
Sbjct: 1580 EEF-DNTRRNHQRAIESMQASLEAEAKGKAEALRI 1613



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 71/237 (29%), Gaps = 39/237 (16%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
              G  + +                I +L   +         L      L    E  +  L
Sbjct: 1489 EVGDTVASL-----RRENKNLADEIHDLTDQLGEGGRNTHELEKARKHLALEKEELQAAL 1543

Query: 139  LDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLN-----RLDLENKSSLLRAL 191
             +  G      +KV      IS + + +  +L      + N     +  +E+  + L A 
Sbjct: 1544 EEAEGALEQEEAKVMRATLEISQIRQEIDRRLQEKEEEFDNTRRNHQRAIESMQASLEAE 1603

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV---YKSTLELRENIHEQKNMLRHINELY 248
                 + L + K L       + D+N+ E  +    +   EL +N+ + +  +R +    
Sbjct: 1604 AKGKAEALRIKKKL-------EGDINELEIALDATNRGKAELEKNVKKYQGQIRELQSQV 1656

Query: 249  DEANLEFAN-----------------YLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            +E   +                     L+E+   LEQ +R      ++L        
Sbjct: 1657 EEEQAQRDEAKEHYQMAERRCAAINGELEELRTILEQAERARKAAENELADASDRVN 1713



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 72/214 (33%), Gaps = 23/214 (10%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  E  E    ++  + +++     +   ++ L+    + ++  +  E  EE   D   +
Sbjct: 1532 LALEKEELQAALEEAEGALEQEEAKVM--RATLEISQIRQEIDRRLQEKEEE--FDNTRR 1587

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK-------SSLLRALLSSHQK 197
             H    +     + +  +     L   + +  +  +LE          + L   +  +Q 
Sbjct: 1588 NHQRAIESMQASLEAEAKGKAEALRIKKKLEGDINELEIALDATNRGKAELEKNVKKYQG 1647

Query: 198  DLTMMKNLFEKNAVSQND----LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +  +++  E+    +++        ER       EL E        LR I E  + A  
Sbjct: 1648 QIRELQSQVEEEQAQRDEAKEHYQMAERRCAAINGELEE--------LRTILEQAERARK 1699

Query: 254  EFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
               N L + S  + + Q   +   S+   LE   
Sbjct: 1700 AAENELADASDRVNELQAQVSTVGSQKRKLEGDV 1733



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 58/199 (29%), Gaps = 26/199 (13%)

Query: 110  IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            +  E+  ++ L+     LE+  +  E+ L     +         +     V + LK    
Sbjct: 1009 LQAEEDKVNHLSKLKTKLEQTLDELEDNL-----EREKKIPGDVDKAKRKVEQDLKTTQE 1063

Query: 170  RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK--------------------- 208
             +  +   + DLE+        ++     L   +NL  +                     
Sbjct: 1064 TVEDLERVKRDLEDAGRKKDMEINGLNSKLEDEQNLVAQLQKKIKELQARIEELEEELEA 1123

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
               ++  + +Q   + +   EL E + E         EL  +   E     +++     Q
Sbjct: 1124 ERQARTKVEKQRTELSRELEELGERLDEAGGATAAQMELNKKREQELLRLRRDLEEATMQ 1183

Query: 269  NQRTFADEMSKLTILEKTR 287
            ++   A    K        
Sbjct: 1184 HESQIATLRKKNQEATNEL 1202


>gi|94309459|ref|YP_582669.1| secretion protein HlyD [Cupriavidus metallidurans CH34]
 gi|93353311|gb|ABF07400.1| multidrug efflux system, subunit A [Cupriavidus metallidurans CH34]
          Length = 523

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 45/124 (36%), Gaps = 3/124 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           ++ ++  G +    NV  +++  SG + K   + G  +  G  L   +       +D   
Sbjct: 153 DVVLNGLGNVTPVANV-TVRAQVSGPLLKVLFKEGQMVKAGDVLAEIDPRPFQATLDQAV 211

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +   +  +  + + LD    K  + + +  S++    D L + +    K     + + 
Sbjct: 212 GQLARDQALL--QNARLDQKRYKTLLAQDSISSQQVDTQDALVRQYEGTVKTDQGNVDNA 269

Query: 161 YRSL 164
              L
Sbjct: 270 RIQL 273


>gi|332710826|ref|ZP_08430763.1| RND family efflux transporter, MFP subunit [Lyngbya majuscula 3L]
 gi|332350379|gb|EGJ29982.1| RND family efflux transporter, MFP subunit [Lyngbya majuscula 3L]
          Length = 531

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/233 (9%), Positives = 53/233 (22%), Gaps = 55/233 (23%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  + +G  L   +D      +   +      +    T ++ L               
Sbjct: 150 REGDFVKKGELLAKLDDRRLRAELAQAQAQTAEAQTQRVTAQANL--------------- 194

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
                                                 +       L  + +    +   
Sbjct: 195 --------------------------------SQSQANVEQTKAQVLSAQAQFEAAKNDF 222

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
                +      LF+   +S++D++           ++R    +    L ++     +  
Sbjct: 223 DLAISEFKRRLELFDAGVISESDVDVYRNRAEDGQSQVRAAQAQVNAALSNVKAAESQ-- 280

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                 L      L   Q   A   +  T    + E   I++P  G + +   
Sbjct: 281 ------LASAQSQLTATQAQIASAKAGQTRSTISLEDTEIVAPFDGIVAHLNI 327


>gi|262368499|ref|ZP_06061828.1| secretion protein HlyD [Acinetobacter johnsonii SH046]
 gi|262316177|gb|EEY97215.1| secretion protein HlyD [Acinetobacter johnsonii SH046]
          Length = 340

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/349 (13%), Positives = 111/349 (31%), Gaps = 44/349 (12%)

Query: 22  LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIK-SP---FSGIIKKFQVENGSQ 77
            + ++G++ +   +  L      +    ++   NV   + S     +G I+   V+ G +
Sbjct: 6   FILLVGVLLIAVAAAFLWFSRDKADPDHLVLYGNVDIRQVSLAFETAGRIQSLAVQEGDR 65

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L        T                I  +++       +  + E+A  +R E+
Sbjct: 66  VQKGQVLAELNTKSLT----------------IQAQQAQAQLHVQQQTLNEQAAGNRPEE 109

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +     K  S  ++  N      Y+ L +         +++ +++   S ++   ++  +
Sbjct: 110 ITQAKAKVQSAQAQFENADKQ--YQRLNVLNRSTAGQAVSKQEVDAAKSNMKMAEAAVGE 167

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
               ++ L +       +  + +    K+ L+L +    Q  +L  +N +      E  +
Sbjct: 168 TKANLELLLKGARTEDREAAKAQYESTKANLDLIDYQITQSKLLAPVNGVIRARLQEVGD 227

Query: 258 YLKEISRDLEQNQ------RTFADEMS----KLTILEKTREQKTILSPIAGTIVYNQS-- 305
                              R +A EM      +    +         PI G I Y  S  
Sbjct: 228 MTTSNKSVYTIALIHPKWVRVYASEMDLGHINMGAAAQVIRDSQPNQPITGKIGYISSVA 287

Query: 306 -FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRF 352
            F+      Q++ +              ++        +K G   TV  
Sbjct: 288 EFTPKTV--QTEDI------RTTLVYEVRIYVDDPNDQLKMGQPVTVNI 328


>gi|241758637|ref|ZP_04756751.1| chromosome segregation protein SMC [Neisseria flavescens SK114]
 gi|241321148|gb|EER57344.1| chromosome segregation protein SMC [Neisseria flavescens SK114]
          Length = 1161

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|194763547|ref|XP_001963894.1| GF21015 [Drosophila ananassae]
 gi|190618819|gb|EDV34343.1| GF21015 [Drosophila ananassae]
          Length = 439

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 74/210 (35%), Gaps = 7/210 (3%)

Query: 86  TFEDIETTDLIDLKKVS-IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           T E +E     + ++ S I+ LR  +   +S            EK  E  EEQ      +
Sbjct: 58  TLELLEALATKNERENSTIQELRDKVAQLESEKLEKAEFRRRFEKELELIEEQWRSETNE 117

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                S + +     V ++  ++ +  +S  L     E+  S+    L S   D  +++ 
Sbjct: 118 LVDLVSSLQDENKRLVKQTQDLQSSSAQSSGLGASLTESIISMTNNELHSALSDTQVLQR 177

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------Y 258
           L E+    +++L Q+ER +     EL     + + +     +      L  A        
Sbjct: 178 LKEQIYKQRDELKQRERELQDKYSELEHLNIQAERLKASERDTRRRHKLMQAQVKTLCEE 237

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             +    L+   R       +L + EK  E
Sbjct: 238 RADFLAQLQDQSREINQLRKRLGLAEKENE 267


>gi|170747821|ref|YP_001754081.1| RND family efflux transporter MFP subunit [Methylobacterium
           radiotolerans JCM 2831]
 gi|170654343|gb|ACB23398.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           radiotolerans JCM 2831]
          Length = 459

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 76/214 (35%), Gaps = 16/214 (7%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR- 264
            +   ++     + + I ++   +L  +    +         Y E  L      +++S  
Sbjct: 179 AKSEYLTAQVQAELQTINFERQQKLLASRSASEAAFETARAAYLENRLRVDLARQKLSAL 238

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL-MKIVP 323
            L+  +   A +  + T  + T  +  + +P+AG IV  +    +   ++  P  +  V 
Sbjct: 239 GLDAAEVAAAQKRDEATPNQSTLRRYPLRAPLAGRIVERKVDVGTAVGKEGDPADLYTVA 298

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
                +I   V    +  V++G   TV  P      E++ +  +  + P ++    +   
Sbjct: 299 DLSTVWIELSVPTLDLAQVREGARVTVT-PGRTGEAERRAEGRVIFVSPFLNPDTRS--- 354

Query: 384 QEYYEVILKITDLAFSDNNIELRNG--FPAEVLF 415
                  + +   A  + ++  R G    AEV  
Sbjct: 355 -----ARVVV---ALPNPDLAWRPGTFVTAEVEI 380


>gi|160873573|ref|YP_001552889.1| hypothetical protein Sbal195_0449 [Shewanella baltica OS195]
 gi|160859095|gb|ABX47629.1| conserved hypothetical protein [Shewanella baltica OS195]
 gi|315265803|gb|ADT92656.1| hypothetical protein Sbal678_0457 [Shewanella baltica OS678]
          Length = 351

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 83/219 (37%), Gaps = 11/219 (5%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +   KR        + LL +I  + ++ W +L P  + V +SG  +     +E+++P +G
Sbjct: 24  YAAAKRGGFKGRWYLLLLLVIAPVAIVGWILLRP-HLFVLASG--IVTTEPLEVRAPSTG 80

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH-IDTEKSALDFLNNKY 124
            +   +V+ G  +  GTP+L+  D +    I   +  +  L    +      L  L  + 
Sbjct: 81  DVSTIRVKPGDTLNVGTPILSISDPQLNAQITELERQLAQLNIEDLSLNSVILKQLQTRI 140

Query: 125 DVLEKAFESREEQLLDFLGKYH------STCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           DV  +    ++  L  +           S  + V     +S     + K+  M++     
Sbjct: 141 DVANEGVTRQDILLKSYENFQRKGVVPTSDMATVLQAHTASKMALEQAKVDLMQAKQKQL 200

Query: 179 LDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           ++L     +  R  +      L   ++  +  A++   +
Sbjct: 201 VELSAGVVTQSRRSIELQLARLKAQQSQLQIKALTATRV 239



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 86/267 (32%), Gaps = 34/267 (12%)

Query: 153 FNYGISSVYRSLKMK-LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            N  I+ + R L    +  +    +    L+ +  +    ++     L   +N   K  V
Sbjct: 107 LNAQITELERQLAQLNIEDLSLNSVILKQLQTRIDVANEGVTRQDILLKSYENFQRKGVV 166

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +D+    +    S + L +                D    +    ++  +  + Q++R
Sbjct: 167 PTSDMATVLQAHTASKMALEQ-------------AKVDLMQAKQKQLVELSAGVVTQSRR 213

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-----K 326
           +   ++++L   +   + K + +     +V           Q  + +++  P +      
Sbjct: 214 SIELQLARLKAQQSQLQIKALTAT---RVVDIL-------VQSGEHIVEDRPLALLAGRD 263

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A + PK + +   G  AT+      D          E +  +  Q       ++ 
Sbjct: 264 NPVVLAFLEPKYLNYTTIGQQATITL-ANGDRFRASISEPTELVGRLPKQLSGPFDGEKP 322

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEV 413
             + + +        +IE   G P EV
Sbjct: 323 -VLQITLKPEMALPVSIE---GVPVEV 345


>gi|119776721|ref|YP_929461.1| HlyD family secretion protein [Shewanella amazonensis SB2B]
 gi|119769221|gb|ABM01792.1| putative HlyD family secretion protein [Shewanella amazonensis
           SB2B]
          Length = 320

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/148 (12%), Positives = 50/148 (33%), Gaps = 7/148 (4%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
             E + + + +P + +I + +V  G ++  GT LL  +       +     ++      +
Sbjct: 30  TVERDRLTLTAPTTELIAEIKVREGDRVSAGTVLLQLDSRAADARLAQAVANLAQAEARL 89

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                     + +    E         L +   +Y  T   V    +++           
Sbjct: 90  AELTKGA--RDEELARAEARLAGARATLSEARAQYERTVRLVAEKVLTA-----ADLDRA 142

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +      + D+++ S  L+ L++  + +
Sbjct: 143 VAGKDRAQADVDSASQALKELIAGTRSE 170


>gi|326670258|ref|XP_003199176.1| PREDICTED: hypothetical protein LOC100536078 [Danio rerio]
          Length = 1422

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 65/192 (33%), Gaps = 5/192 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                I  +K   K L    + E+     +  + ++  +  +  E + +    +      
Sbjct: 595 RREAEIQKEKERQKELERQREQERERQRQIERQREIERQKLKQIEYERMKAAERELEQQR 654

Query: 151 KVFNYGISSVYRSLKMKLTRMR---SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           +          R  +  L + R     +  + ++E +      L    + +    + L +
Sbjct: 655 EFERQRQKEFEREKERMLEQERLRLREFEKQKEIEKERERQLELERQREIERQKQRELEK 714

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  + +    +++R + +   EL +   +++   RH+    +          +E+ R LE
Sbjct: 715 QREIERQKEIERQRELQRQR-ELEKQKEQEREKQRHLERQKELDRQRELERQRELERQLE 773

Query: 268 -QNQRTFADEMS 278
            + Q+    +  
Sbjct: 774 IERQKEIEKQKE 785



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 64/174 (36%), Gaps = 4/174 (2%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +   +  K+A   L  + +   +  +  E +    L +      +          R  ++
Sbjct: 637 QIEYERMKAAERELEQQREFERQRQKEFEREKERMLEQERLRLREFEKQKEIEKERERQL 696

Query: 167 KLTRMRSIYLN-RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           +L R R I    + +LE +  + R      Q++L   + L ++    + +  +Q  +  +
Sbjct: 697 ELERQREIERQKQRELEKQREIERQKEIERQRELQRQRELEKQK---EQEREKQRHLERQ 753

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
             L+ +  +  Q+ + R +     +   +   + ++   DL+  + T      +
Sbjct: 754 KELDRQRELERQRELERQLEIERQKEIEKQKEFERQKQMDLDIERWTRQKAEER 807



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 68/212 (32%), Gaps = 17/212 (8%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  K + + L    + E+        + + + +    R  +             ++  
Sbjct: 639 EYERMKAAERELEQQREFERQRQKEFEREKERMLEQERLRLREFEKQKEIEKERERQLEL 698

Query: 155 YGISSVYRSLKMKLTRMRSIYLN-----------RLDLENKSSLLRALLSSHQKDLTMMK 203
                + R  + +L + R I              + +LE +    R      Q+ L   K
Sbjct: 699 ERQREIERQKQRELEKQREIERQKEIERQRELQRQRELEKQKEQERE----KQRHLERQK 754

Query: 204 NL-FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE-LYDEANLEFANYLKE 261
            L  ++    Q +L +Q  I  +  +E ++    QK M   I      +A    A    E
Sbjct: 755 ELDRQRELERQRELERQLEIERQKEIEKQKEFERQKQMDLDIERWTRQKAEEREAKKELE 814

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
               +++ ++    +     I E+  +Q  + 
Sbjct: 815 ELERIKELEKQQLLDFESQRIRERPLQQDQVR 846



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 10/213 (4%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLR----CHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           + F+D          ++SI   R         ++ +L+  N    + +   + RE Q   
Sbjct: 491 VPFDDFAIRSGQWSPQISIAPFRRNPSLDAAMQRDSLENKNEAGPITDTKLQERERQKAV 550

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             G                + R  +MK  R        ++ ++K    +   +  QK+  
Sbjct: 551 REGFEIDRQMIAEIEKEKELERQREMKRQR-----DLEIEKQSKIEREKRREAEIQKEKE 605

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-NIHEQKNMLRHINELYDEANLEFANYL 259
             K L  +    +    Q ER       +L++      K   R + +  +        + 
Sbjct: 606 RQKELERQREQERERQRQIERQREIERQKLKQIEYERMKAAERELEQQREFERQRQKEFE 665

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +E  R LEQ +    +   +  I ++   Q  +
Sbjct: 666 REKERMLEQERLRLREFEKQKEIEKERERQLEL 698



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/193 (8%), Positives = 61/193 (31%), Gaps = 1/193 (0%)

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL-LDFLGKYHSTCSKVFNYG 156
            ++   K +R   + ++  +  +  + ++  +    R+  L ++   K      +     
Sbjct: 542 QERERQKAVREGFEIDRQMIAEIEKEKELERQREMKRQRDLEIEKQSKIEREKRREAEIQ 601

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                +    +          +++ + +    +     +++     + L ++    +   
Sbjct: 602 KEKERQKELERQREQERERQRQIERQREIERQKLKQIEYERMKAAERELEQQREFERQRQ 661

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + ER   +   + R  + E +       E   +  LE    ++   +   + QR    +
Sbjct: 662 KEFEREKERMLEQERLRLREFEKQKEIEKERERQLELERQREIERQKQRELEKQREIERQ 721

Query: 277 MSKLTILEKTREQ 289
                  E  R++
Sbjct: 722 KEIERQRELQRQR 734



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 68/206 (33%), Gaps = 7/206 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ++ E    +       + +   I+ EK     L  + ++  +     E+Q      K 
Sbjct: 540 KLQERERQKAVREGFEIDRQMIAEIEKEK----ELERQREMKRQRDLEIEKQSKIEREKR 595

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR-ALLSSHQKDLTMMKN 204
                +        + R  + +  R R I   R     K   +    + + +++L   + 
Sbjct: 596 REAEIQKEKERQKELERQREQERERQRQIERQREIERQKLKQIEYERMKAAERELEQQRE 655

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
              +    +    ++ER++ +  L LRE   +++       +L  E   E     +    
Sbjct: 656 FERQR--QKEFEREKERMLEQERLRLREFEKQKEIEKERERQLELERQREIERQKQRELE 713

Query: 265 DLEQNQRTFADEMSKLTILEKTREQK 290
              + +R    E  +    ++  E++
Sbjct: 714 KQREIERQKEIERQRELQRQRELEKQ 739


>gi|300112864|ref|YP_003759439.1| RND family efflux transporter MFP subunit [Nitrosococcus watsonii
           C-113]
 gi|299538801|gb|ADJ27118.1| efflux transporter, RND family, MFP subunit [Nitrosococcus watsonii
           C-113]
          Length = 382

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 90/286 (31%), Gaps = 19/286 (6%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           ++ D L +              ++    +++L   R +      +  + + L A+L    
Sbjct: 41  EVSDILAQQIKVRPVGHGRVRDTLRLPGRVQLDEQR-LARIGASVTGRITALYAILGQEV 99

Query: 197 KDLTMMKNL--FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           +   ++  L   E  A     L    ++  +     R       +++        E  L 
Sbjct: 100 QRGDILAELNSTELGAAQAAYLKAASQVSLRKLAVSRAQRLLAGDVIGSAELQEREGELV 159

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A    +   D  +       ++ +LT   +      I + + G ++  +  S     Q 
Sbjct: 160 AAQVEMQAGADQLRVLGMTDGDIKQLTRNRQIDSHSHITATLNGVVIG-RRISLGQVVQP 218

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           S  L  I   S +  + A++   Q   V++G  A V  P          +  +  +  ++
Sbjct: 219 SDTLYTIADLSHVWLV-AEIPENQAYLVREGQEAEVEIPALP---GPSARGQLIYVADVV 274

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                 +       V + + +        ++R    A ++   + T
Sbjct: 275 DPNTRTVT------VRMDVPNPQR-----QIRPNMLASIVIHTRAT 309


>gi|282876968|ref|ZP_06285817.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella buccalis ATCC 35310]
 gi|281300922|gb|EFA93242.1| auxiliary transport protein, membrane fusion protein (MFP) family
           protein [Prevotella buccalis ATCC 35310]
          Length = 329

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 71/221 (32%), Gaps = 16/221 (7%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A +   T++ ++ IIG  T   L      V   GEI   +    + S   G I + +V+ 
Sbjct: 13  AIIGFATVVILVAIIGFFT---LGKKPEIV--QGEIEVSEYR--VSSKLPGRILELRVKE 65

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFE 132
           G  +  G  L   E  E            +      D   +    + +   Y + ++A  
Sbjct: 66  GDYVRVGDTLAILEAPEVNAQEKAAAAQQQAAAAMSDMADNGARKEQIQAAYQLWQQALA 125

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +      D   K +     +F+ G+ S  +         ++        +++  + +   
Sbjct: 126 A-----ADIAQKSYERVQNLFDQGVMSAQK-RDEAFAGYKAREAQVKAAKSQYDMAKNGA 179

Query: 193 SSHQKDLTMMKNLFEKNAVSQND-LNQQERIVYKSTLELRE 232
              +K     +    + A +    L ++   +     E+  
Sbjct: 180 REEEKRAAKKQAQAAEGAANVVRSLLRETVQISNVEGEVSS 220


>gi|183598319|ref|ZP_02959812.1| hypothetical protein PROSTU_01709 [Providencia stuartii ATCC 25827]
 gi|188020493|gb|EDU58533.1| hypothetical protein PROSTU_01709 [Providencia stuartii ATCC 25827]
          Length = 367

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 68/209 (32%), Gaps = 19/209 (9%)

Query: 17  LKRMTLLSIIGIIGLI-----------TWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +  + +L  IGI                      +   V ++G++     V ++ +  SG
Sbjct: 11  VSLLVILIAIGIAFFFFTEDKKEAFQTVAVARGDLNKQVQATGKLDAVRKV-DVGAQVSG 69

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA--LDFLNNK 123
            ++   V+ G ++ +G  L   +  +  + +   + +I  L  H+   K+   L  +  +
Sbjct: 70  QLQTLYVQEGDKVKKGDLLAVIDPQKAQNDVTESQETIHELESHLALAKAELRLAEVTYQ 129

Query: 124 YDVLEKAFESREEQLLDFLG---KYHSTCSKVFNYGISSVYRSLKMKLTRMR--SIYLNR 178
             +     ++  +Q LD               +   I     +L    T ++   I    
Sbjct: 130 RQLSLSKLQAVSKQDLDKAQTDVAVKKAQVATYQAQIKRNQATLDTAKTNLKYTQITAPM 189

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             +      L+       ++   +  L +
Sbjct: 190 DGIVTFIKTLQGQTVIAAQEAPTILTLAD 218



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/256 (10%), Positives = 84/256 (32%), Gaps = 25/256 (9%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           +  +++        +   + K   L A++   +    + +        SQ  +++ E  +
Sbjct: 63  VGAQVSGQLQTLYVQEGDKVKKGDLLAVIDPQKAQNDVTE--------SQETIHELESHL 114

Query: 224 YKSTLELR--ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             +  ELR  E  ++++  L  +  +  +   +    +      +   Q       + L 
Sbjct: 115 ALAKAELRLAEVTYQRQLSLSKLQAVSKQDLDKAQTDVAVKKAQVATYQAQIKRNQATLD 174

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQI 339
             +   +   I +P+ G + + ++          +   ++ +        ++A+V+   +
Sbjct: 175 TAKTNLKYTQITAPMDGIVTFIKTLQGQTVIAAQEAPTILTLA-DLNTMLVKAEVSEADV 233

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
            H+K G  A       +             +   I      +    +Y    ++ +    
Sbjct: 234 IHLKPGQAA-------SFTVLGAPDKRFSGVLKDILPTPEKINDAIFYYARFEVPNP--- 283

Query: 400 DNNIELRNGFPAEVLF 415
            + ++L+    A+V  
Sbjct: 284 QHLLKLQ--MTAQVKI 297


>gi|167533973|ref|XP_001748665.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772906|gb|EDQ86552.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1078

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 74/207 (35%), Gaps = 12/207 (5%)

Query: 76  SQILQGTPL--LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            +++    L  L  +          ++     +   + T +  L  L ++Y + E+A  +
Sbjct: 402 QKVVAAQDLEKLRAQLTALASEATKQRQQQNEVEEALLTRRRDLQALEHEYQLKEEALRT 461

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R +              +        ++   +        +  +R  L+ + SL RA L 
Sbjct: 462 RSDLATQAAAAQAEQLREQLQIKQQQLHELQENLSAERARLDQDRRQLQEQLSLQRAQLD 521

Query: 194 SHQKDLTMMKNLFEK--------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              + L   + L E+        +AVS++D  +Q+    ++   + + + E    +  + 
Sbjct: 522 QEAEQLR-TRALEERAAILAKTDSAVSESDKRRQQ-AWDEAEARVAQAMEEANRRVARVE 579

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRT 272
               +   +     +   R++E++ RT
Sbjct: 580 AQAAQQIEQAEANSQARRREVEEHLRT 606


>gi|58428405|gb|AAW77442.1| membrane fusion protein precursor [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 435

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 65/192 (33%), Gaps = 11/192 (5%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +    SG +     + G ++ +G  L   +        D    + 
Sbjct: 85  ASALGTVT-ALNTVTVSPQVSGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAK 143

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +      N+      V     +++  Q+  +     +  +++ +  +   
Sbjct: 144 RQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVSANDAQMRSAQVQLQ 203

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   +  +  I    +D+ N  S    L++  Q     ++ ++    + + +L    
Sbjct: 204 FTRITAPIDGIAGIRG--VDVGNIVSSTSTLVTLTQ-----IRPIYVSFNLPERELEAVR 256

Query: 221 RIVYKSTLELRE 232
                + L +  
Sbjct: 257 AGQAATPLSVAA 268



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 58/179 (32%), Gaps = 12/179 (6%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEI 262
            +K   ++Q D    +    ++    R+N         +     D A  ++ +   L   
Sbjct: 118 VKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQ 177

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + Q +   +   +++   +   +   I +PI G I   +     N    +  L+ + 
Sbjct: 178 RNQVAQYEAAVSANDAQMRSAQVQLQFTRITAPIDG-IAGIRGVDVGNIVSSTSTLVTLT 236

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTAT-VRFPHYADIRE------KKFKAIIEKIDPII 374
              +  Y+   +  ++++ V+ G  AT +                 K   I  +I    
Sbjct: 237 -QIRPIYVSFNLPERELEAVRAGQAATPLSVAALDRGDAHVISGDGKLDVIDNRISADS 294


>gi|83773200|dbj|BAE63327.1| unnamed protein product [Aspergillus oryzae]
          Length = 1136

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 73/224 (32%), Gaps = 5/224 (2%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++ Q   L      +T   +   +    N R   + ++  L   + +   LE+    
Sbjct: 443 EQQRLAQEQLLRDQYQTQTQGRLAELEQENLNARAQYERDQLMLQQYDRRVKDLEEQMNQ 502

Query: 134 REEQLLDFLGKYHSTCSKVFNYGI---SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               L +          +     +    S Y +L    +++R  +L+ L       L  A
Sbjct: 503 LTSNL-NMQSASKDEQIRSLQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTTKSLKLKAA 561

Query: 191 LL-SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               + ++   + + L  KN    + + +++R ++        N  E + + R +    +
Sbjct: 562 SAQEAIERREKLERELKTKNLELADMIRERDRALHDRDRLTGNNKEELEKVKRELRLAIE 621

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            A         EIS  L +  R  AD    L    +  E  +  
Sbjct: 622 RAENAERQKGTEISTLLSKYNREMADLEEALRNKNRALEDISSR 665



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 78/210 (37%), Gaps = 7/210 (3%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           FE+ +       +    + LR    T+         + ++  +A   R++ +L    +  
Sbjct: 434 FEEQQRLQAEQQRLAQEQLLRDQYQTQTQGRLAELEQENLNARAQYERDQLMLQQYDRRV 493

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD----LTMM 202
               +  N   S++      K  ++RS+        +K   L  L S  +++    L   
Sbjct: 494 KDLEEQMNQLTSNLNMQSASKDEQIRSLQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTT 553

Query: 203 KNLFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           K+L  K A +Q  + +    ER +    LEL + I E+   L   + L      E     
Sbjct: 554 KSLKLKAASAQEAIERREKLERELKTKNLELADMIRERDRALHDRDRLTGNNKEELEKVK 613

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +E+   +E+ +     + ++++ L     +
Sbjct: 614 RELRLAIERAENAERQKGTEISTLLSKYNR 643


>gi|322419591|ref|YP_004198814.1| RND family efflux transporter MFP subunit [Geobacter sp. M18]
 gi|320125978|gb|ADW13538.1| efflux transporter, RND family, MFP subunit [Geobacter sp. M18]
          Length = 473

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 19/192 (9%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +L     E    L+   +    +    +   + +     Q  +    +  ++  LEK   
Sbjct: 167 DLVAAQQEYLLALKSREQFKKSSIESISQGGEGLVASARQRLKLLGVKDEQIAGLEKGGH 226

Query: 289 ---QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              +  I +P++G ++         Y +   PL  I       ++  +V   +   VK G
Sbjct: 227 PNIRLPIYTPLSGIVIEKMV-QEGQYVETGMPLFSIA-DLSSVWVEVEVYENEFSFVKMG 284

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
               +    Y     K F   +  I P +  +           V +++      +  ++L
Sbjct: 285 QRVEIISQSYP---GKTFSGRVSFIYPFLDPKTRT--------VKVRV---EMGNPGLKL 330

Query: 406 RNGFPAEVLFTA 417
           +          A
Sbjct: 331 KPDMFVNARIKA 342


>gi|253990330|ref|YP_003041686.1| macrolide transporter subunit MacA [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781780|emb|CAQ84943.1| macrolide-specific efflux protein maca [Photorhabdus asymbiotica]
          Length = 370

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 72/219 (32%), Gaps = 24/219 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQN 269
           +QN + + E  + +    L E   + K     +    D A ++      L ++  D+E  
Sbjct: 97  AQNQVKEVEATIKELNANLMEAKAQLKLAQLTLQRQNDLAKVQAVSHQELDQVKTDVEVK 156

Query: 270 QRTFADEMSK-------LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMK 320
           +      +++       L   +   +   I +P+ G +V  ++          +   ++ 
Sbjct: 157 RAKVETLLAQISKNQASLDTAQTNLQYTRITAPMDGIVVNIKTLQGQTVIAAQEAPTILT 216

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +        ++A+V+   + ++K G  A       +             +   I      
Sbjct: 217 LA-DLGTMLVKAEVSEADVIYLKPGLKA-------SFTVLGAPDKNFTGVLKDILPTPEK 268

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +    ++    ++ +   S   + L+    A+V     +
Sbjct: 269 INDAIFFYARFEVPN---SQQLLRLQ--MTAQVKIQLDS 302



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 75/221 (33%), Gaps = 24/221 (10%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSIL----------------LPIEISVSSSGEILNEDN 55
           N  +S +R  +L +I  +     +                    ++ +V ++G++     
Sbjct: 2   NFMSSKRRWIVLLVIMAVIASVLAYFLHRPETVKYQTVSVIKGDLQKNVLATGKLDAVRK 61

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
           V ++ +  SG ++   VE G ++ +G  L   +     + +   + +IK L  ++   K+
Sbjct: 62  V-DVGAQVSGQLQNLYVEVGDKVTKGQLLALIDPKPAQNQVKEVEATIKELNANLMEAKA 120

Query: 116 ALDFLN---NKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTR 170
            L        + + L K      ++L           +KV      IS    SL    T 
Sbjct: 121 QLKLAQLTLQRQNDLAKVQAVSHQELDQVKTDVEVKRAKVETLLAQISKNQASLDTAQTN 180

Query: 171 MR--SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           ++   I      +      L+       ++   +  L +  
Sbjct: 181 LQYTRITAPMDGIVVNIKTLQGQTVIAAQEAPTILTLADLG 221


>gi|253687081|ref|YP_003016271.1| hypothetical protein PC1_0680 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753659|gb|ACT11735.1| conserved hypothetical protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 451

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 53/154 (34%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +  + N     +R+ L  I+ ++ ++    L+P+  SV +  EI+    V  +++P +G+
Sbjct: 173 RRRQTNTSPKKRRLILAGIVALVLIL----LIPVRQSVLAPAEIVAHRPV-MVRAPVAGV 227

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V     +    PL+  +  E  + ++  + +           +    F  N    
Sbjct: 228 VDDILVRPNQSVSANQPLVRLDVRELENRLESARQAFATADAQYRQAQQQALFDANSKAS 287

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           L      RE+   D                   V
Sbjct: 288 LAVLQSRREQAQSDMDFLQRQQERMQLTSPRDGV 321



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 52/330 (15%), Positives = 109/330 (33%), Gaps = 18/330 (5%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L   +    + L  +  +      A     E+L D      S+  K      ++  +  +
Sbjct: 126 LPLRLPQGDAPLVLVLARDSAWLPAEIVLLEKLADAYAHAWSSLLKQRRRQTNTSPKKRR 185

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM--MKNLFEKNAVSQNDLNQQERIV 223
           + L  + ++ L  L    +S L  A + +H+  +    +  + +   V  N      + +
Sbjct: 186 LILAGIVALVLILLIPVRQSVLAPAEIVAHRPVMVRAPVAGVVDDILVRPNQSVSANQPL 245

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +  +   EN  E         +       + A +       L   Q       S +  L
Sbjct: 246 VRLDVRELENRLESARQAFATADAQYRQAQQQALFDANSKASLAVLQSRREQAQSDMDFL 305

Query: 284 EKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQH 341
           ++ +E+  + SP  G  I  + +          + +M I  PH     I  ++       
Sbjct: 306 QRQQERMQLTSPRDGVAIFDDSNDWIGRSVAVGERIMMIADPHDVELEI--QLPAADAIA 363

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           ++ G  A VR             A +E+I    +   +N+     Y +  +     F+ +
Sbjct: 364 LENG--ADVRL-FLNVAPNSAQDARLEQIGYRAAPTPDNVMA---YRLRAR-----FTQD 412

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEII-HPI 430
           + +LR G         K T L   ++  P+
Sbjct: 413 DPQLRVGLKGTAKLYGKRTVLFVYLLRKPL 442


>gi|187926404|ref|YP_001892749.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii
           12J]
 gi|241665891|ref|YP_002984250.1| efflux transporter RND family, MFP subunit [Ralstonia pickettii
           12D]
 gi|187728158|gb|ACD29322.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii
           12J]
 gi|240867918|gb|ACS65578.1| efflux transporter, RND family, MFP subunit [Ralstonia pickettii
           12D]
          Length = 436

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 43/128 (33%), Gaps = 4/128 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG I      VE++   SG +     ++GS + +G  L T +       +   + ++   
Sbjct: 62  SGRIEAV-QRVEVRPLVSGTVTAVHFKDGSIVKKGDALFTIDPRPYAAEVARTQAALTAA 120

Query: 107 RCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  +    +E      L     +  + FE +E    +         + +    ++  Y  
Sbjct: 121 KSRVAYTTSELDRAQKLVADNAIARREFEEKENAAREAQANLQGAAAALEAARLNLEYTH 180

Query: 164 LKMKLTRM 171
           +   +   
Sbjct: 181 IVAPVAGR 188



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 29/101 (28%), Gaps = 7/101 (6%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------YLKEISRDLEQNQRTFA 274
           R         +  +   K+ + +     D A    A+        +E      + Q    
Sbjct: 104 RPYAAEVARTQAALTAAKSRVAYTTSELDRAQKLVADNAIARREFEEKENAAREAQANLQ 163

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              + L       E   I++P+AG +   +  +  N     
Sbjct: 164 GAAAALEAARLNLEYTHIVAPVAGRVSRAEI-TVGNVVSAG 203


>gi|124514930|gb|EAY56441.1| Secretion protein (HlyD) [Leptospirillum rubarum]
          Length = 418

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 64/208 (30%), Gaps = 33/208 (15%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E    +K  L  +     +   +    L E +++  +       E+ +L      R    
Sbjct: 163 ELASSEKEALIALGATRSDPKSKDDRSLWEAAQERLRLLGVPDSEIGRLEKTGLPRSVLP 222

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + SP +G +    +          +PLM +V      ++   +   Q+  VK G   T  
Sbjct: 223 VTSPYSGIVATIAAR-VGGEISPDKPLMTLV-DLSRVWVDVALYVDQLNWVKPGDPVTFH 280

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF-- 409
            P       +     +  +DP ++++           V  ++      + +  L+ G   
Sbjct: 281 IPAVPSRVYR---GTMHFVDPRLNRKSRT--------VRARVP---VENTDGFLKPGMYL 326

Query: 410 ---------------PAEVLFTAKNTTL 422
                          P + L   +  T+
Sbjct: 327 EATLHPDPRPDVLIVPRKALIRTEKKTI 354


>gi|221068251|ref|ZP_03544356.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
 gi|220713274|gb|EED68642.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
          Length = 402

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 88/294 (29%), Gaps = 21/294 (7%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E ++      +   + V    ++SV           R +      +  + + + A     
Sbjct: 55  EVVVSAEMATNFKTAAVAQAEVASVQEIAGRIEANERRVTRIGAAVTGRVTEVLAETGDR 114

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ---KNMLRHINELYDEAN 252
            K    +  +      +   L         +  E       Q    +++     L  E+ 
Sbjct: 115 VKTGQTLARVASPELTT-AQLAYMRASATATLAERSVERARQLIAADVIGSAELLRRESE 173

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           ++ A      + D  +     AD +S L           I +  AG ++  Q  S    A
Sbjct: 174 VQIARAELRAAGDQLKLMGLSADALSSLRAKGNVAPNAAITASAAGIVIERQV-SQGQVA 232

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQH-VKKGYTATVRFPHYA-DIREKKFKAIIEKI 370
           Q   PL  +   S +  + A   P+QI   V+ G    V  P     + E      I  +
Sbjct: 233 QPGDPLFTVADLSNVWVVGA--LPEQIARSVQTGQNVQVDVPALGLTVEETPISGKIIYV 290

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK-NTTLA 423
              +S +           V ++       + ++ L+    A +        TLA
Sbjct: 291 GDTVSPETRT--------VTIRTQ---VDNKDLALKPQMLATMKIQGAMEKTLA 333



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 43/129 (33%), Gaps = 6/129 (4%)

Query: 35  SILLPIEISVSSS--GEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTF-EDI 90
           + +   E++      G I   +  V  I +  +G + +   E G ++  G  L       
Sbjct: 69  AAVAQAEVASVQEIAGRIEANERRVTRIGAAVTGRVTEVLAETGDRVKTGQTLARVASPE 128

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            TT  +   + S          E++    L     +       RE ++     +  +   
Sbjct: 129 LTTAQLAYMRASATATLAERSVERAR--QLIAADVIGSAELLRRESEVQIARAELRAAGD 186

Query: 151 KVFNYGISS 159
           ++   G+S+
Sbjct: 187 QLKLMGLSA 195


>gi|52842349|ref|YP_096148.1| chemiosmotic efflux system protein B [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|19880984|gb|AAM00613.1| chemiosmotic efflux system protein B-like protein [Legionella
           pneumophila]
 gi|52629460|gb|AAU28201.1| chemiosmotic efflux system protein B [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 322

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 16/118 (13%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +PIAG I   ++ +     + +  L  I  +     + A+V  + +  VK G    V 
Sbjct: 128 VNAPIAGII-DARNINLGQAVEPNTVLFHIS-NRDKLLVIAQVYEEDLGKVKVGQEVNVH 185

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              Y           +  I+P +              V ++IT     +    L+ G 
Sbjct: 186 VLSYPKQTFP---GQVTLIEPNLDPLTRT--------VNVRIT---LDNKEGLLKPGM 229


>gi|17986936|ref|NP_539570.1| periplasmic component of efflux system [Brucella melitensis bv. 1
           str. 16M]
 gi|17982581|gb|AAL51834.1| periplasmic component of efflux system [Brucella melitensis bv. 1
           str. 16M]
          Length = 331

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 11  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQYRQAK 68

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 69  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLARSRQLSESRTVSQQ 128


>gi|157162719|ref|YP_001460037.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli HS]
 gi|167017127|sp|A8A550|AAEA_ECOHS RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|157068399|gb|ABV07654.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           HS]
          Length = 310

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 22/188 (11%)

Query: 204 NLFEKNAVS--------QNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLE 254
            L +K  V         Q  L + +  V    +  +E   E     R  +  +  E   +
Sbjct: 67  QLVKKGQVLFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQ 126

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N L+ +   L + Q T         + +   E+  I +P+ G +     ++   +  +
Sbjct: 127 ANNVLQTVLHQLAKAQATR-------DLAKLDLERTVIRAPVDGWVTNLNVYT-GEFITR 178

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               + +V  +   Y+ A +   +++ V+ GY A +          K  K  ++ +   +
Sbjct: 179 GSTAVALVKQNS-FYVLAYMEETKLEGVRPGYRAEIT----PLGSNKVLKGTVDSVAAGV 233

Query: 375 SQQDNNLQ 382
           +   +   
Sbjct: 234 TNASSTRD 241



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    +   + L+ +  I     W            + +     +VV I    SG+
Sbjct: 2   KTLIRKFSRTAITVVLVILAFIAIFNAWVYYTE----SPWTRDARFSADVVAIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V +   + +G  L T +       ++  +  +   +  +  EK       N+  V
Sbjct: 58  ITQVNVHDNQLVKKGQVLFTIDQPRYQKALEEAQADVAYYQV-LAQEKRQEAGRRNRLGV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVLHQLAKAQATRDLAKL 150


>gi|301780132|ref|XP_002925488.1| PREDICTED: liprin-alpha-4-like [Ailuropoda melanoleuca]
          Length = 1157

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 74/229 (32%), Gaps = 19/229 (8%)

Query: 72  VENGSQILQGTPLL---TF--EDI----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           V +G    +GT  L       +D     E  +L++ +   +   R  + T  + +  L  
Sbjct: 202 VRDGVAEEEGTVELGPKRLWKDDTGRVEELQELLEKQNFELSQARERLVTLTATVAELEE 261

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLKMKLTRMRSIYLNRLD 180
                 +     EE             ++       I+++ +          SI+     
Sbjct: 262 DLGTARRDLIKSEELSSKHQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDK 321

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LEN+ +   +L    ++    ++ L E          ++   + +   EL + I      
Sbjct: 322 LENELANKESLHRQCEEKARHLQELLEVAERKLQQTMRKAETLPEVEAELAQRIAALTKA 381

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                   +E +     +L+++   LE+  +  A    +  + E   ++
Sbjct: 382 --------EERHGSIEEHLRQLEGQLEEKNQELARVRQREKMNEDHNKR 422


>gi|262037211|ref|ZP_06010696.1| putative periplasmic component of efflux system [Leptotrichia
           goodfellowii F0264]
 gi|261748765|gb|EEY36119.1| putative periplasmic component of efflux system [Leptotrichia
           goodfellowii F0264]
          Length = 378

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 71/208 (34%), Gaps = 34/208 (16%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            D N+ +R +   +LE+++   + +N          +     A  + +    L+  Q   
Sbjct: 96  VDRNELQRKIQIKSLEVQQKQRDLRNA-----SELKKIGGASAVSVDDARIALQTAQLEL 150

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYN------QSFSSSNYAQQSQPLMKIVPHSKL 327
           +       +L        I SP+ G I         +  +        +  +  V  +K 
Sbjct: 151 SSLREDYALLVD-----NIKSPVDGVITAMTADENYRVNT--------ETTLFKVSDAKN 197

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +   +T  ++Q++  G    +        + ++ +  + +I  + ++  N  ++    
Sbjct: 198 MKVEVSLTDSEVQNIAVGQRVEISSDALP--KGQQIEGTVSQISGVATKNANLDESNT-- 253

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLF 415
            V +K++D         LR G     + 
Sbjct: 254 TVSIKLSDPK------GLRPGATINAII 275


>gi|260857592|ref|YP_003231483.1| putative HlyD family secretion protein [Escherichia coli O26:H11
           str. 11368]
 gi|257756241|dbj|BAI27743.1| predicted HlyD family secretion protein [Escherichia coli O26:H11
           str. 11368]
 gi|323154084|gb|EFZ40288.1| hlyD family secretion family protein [Escherichia coli EPECa14]
          Length = 355

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSESRAAQSLVNQRQAELDSVAKRHMRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|222106521|ref|YP_002547312.1| HlyD family secretion protein [Agrobacterium vitis S4]
 gi|221737700|gb|ACM38596.1| HlyD family secretion protein [Agrobacterium vitis S4]
          Length = 396

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 68/208 (32%), Gaps = 12/208 (5%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            V+++    G I+      G+ +  G  L T +       +D  +    +    +D  + 
Sbjct: 75  RVDVRPRVGGAIQSVHFREGALVKAGDLLFTIDPAPYQAAVDQAEGQFASAEAKVDLARI 134

Query: 116 ALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS----SVYRSLKMKL 168
            LD    L+    + +   + R            +  +++ +  +      V   +  ++
Sbjct: 135 ELDRGLKLSGNSTISQSDMDQRRNSFTQAQAAMGTARAQLQSAQLELDYTQVRAPVSGRV 194

Query: 169 TRMRSIYLNRLDLENKSSLLRALLS--SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
            ++     N +   + SS+L  L+S         + + L  K              + + 
Sbjct: 195 GKLEVTAGNLVASGSSSSVLTTLVSVDPIYASFNVSEQLVAKALSQLPQTGAALADIDRI 254

Query: 227 TLELRENIHE---QKNMLRHINELYDEA 251
            +E+     +    K  L+ IN   D A
Sbjct: 255 PVEIGTLADDGTPIKGKLQLINNQVDAA 282



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 29/98 (29%), Gaps = 14/98 (14%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLK-------------EISRDLEQNQRTFADEM 277
           +  + + +          D A +E    LK             +      Q Q       
Sbjct: 112 QAAVDQAEGQFASAEAKVDLARIELDRGLKLSGNSTISQSDMDQRRNSFTQAQAAMGTAR 171

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           ++L   +   +   + +P++G +   +  ++ N     
Sbjct: 172 AQLQSAQLELDYTQVRAPVSGRVGKLEV-TAGNLVASG 208


>gi|83816479|ref|YP_446916.1| cation efflux system protein CzcB-like protein [Salinibacter ruber
           DSM 13855]
 gi|83757873|gb|ABC45986.1| cation efflux system protein CzcB-like protein [Salinibacter ruber
           DSM 13855]
          Length = 369

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 71/213 (33%), Gaps = 25/213 (11%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDLEQN 269
               + Q E +   +  +L   + + +     ++     DE  +     ++   R+ +  
Sbjct: 100 PGTRVAQGEVVADVAAPDLSRMVADLRQARSDLDRQRRLDERGVAVEKNVRAAERNWQAA 159

Query: 270 QRTFAD------EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           ++           + ++    +      + +P+ G ++           QQ   L +IV 
Sbjct: 160 RQRLRSVGVRPARIEQVATGAQDMRTLPLEAPLDGIVLNRMGV-LGAPVQQGDTLYRIV- 217

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             +   + A+V  + +  V+ G  AT+  P    +  + ++  I +I P +  +      
Sbjct: 218 DLQPIRVVARVFEQSLDKVRTGQPATITTP----MAPRSYQGTIGRIIPQVGDESRAAS- 272

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                       +   + +  LR G  A V   
Sbjct: 273 ----------ARIVLDNTDGTLRPGMYASVQVQ 295


>gi|127512109|ref|YP_001093306.1| RND family efflux transporter MFP subunit [Shewanella loihica PV-4]
 gi|126637404|gb|ABO23047.1| efflux transporter, RND family, MFP subunit [Shewanella loihica
           PV-4]
          Length = 417

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 68/208 (32%), Gaps = 26/208 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           NL +  AVSQ  +      V+    + + N+ E K  L        E             
Sbjct: 106 NLSDNQAVSQGQVL-----VHLEDAKAKANLAEAKAYLNDERRKLGEYK-RLIKQHAITQ 159

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
            +++    +     ++L   +   +  T+ +P  G I     FS            ++V 
Sbjct: 160 TEIDAQLASVDIAEARLQAAQADLDYHTLKAPFDGVI-GLVDFSLGKLVSVGS---ELVS 215

Query: 324 HSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                   +  ++  + +  +  G         +     ++F   +  + P I+ +  NL
Sbjct: 216 LDDLSSMRLDLQIPERYLSQIYLGMPVVASSSAWP---GEQFHGQVVAMAPRINSETLNL 272

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGF 409
                 +V +      F + +++LR G 
Sbjct: 273 ------KVRVN-----FDNPSLQLRPGM 289



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 53/155 (34%), Gaps = 2/155 (1%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G++    +V  I +  SG ++   + +   + QG  L+  ED +    +   K  + + R
Sbjct: 84  GKLAANRSVQ-IAAEVSGKVQAINLSDNQAVSQGQVLVHLEDAKAKANLAEAKAYLNDER 142

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +   K  +         ++    S +                        V   +   
Sbjct: 143 RKLGEYKRLIKQHAITQTEIDAQLASVDIAEARLQAAQADLDYHTLKAPFDGVIGLVDFS 202

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           L ++ S+    + L++  S +R  L   ++ L+ +
Sbjct: 203 LGKLVSVGSELVSLDD-LSSMRLDLQIPERYLSQI 236


>gi|258621466|ref|ZP_05716500.1| periplasmic linker protein, putative [Vibrio mimicus VM573]
 gi|258586854|gb|EEW11569.1| periplasmic linker protein, putative [Vibrio mimicus VM573]
          Length = 364

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 56/167 (33%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L T +  +    ++  ++ +KN        K+  +     
Sbjct: 77  SGRLTDIAVKEGDQVKKGQRLATLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ D   K   T       GI S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEDAKRKLEYTQITAPFDGIISEKVVENFAQVQANQVIMTLQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +   ++          +   + + E +A+     + Q R     
Sbjct: 197 DLSDLEVVIEIPHRVMLSGVRNTRAIAELSAIPDQQFDLQLRTYSTQ 243



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 64/205 (31%), Gaps = 25/205 (12%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + +R+    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 90  QVKKGQRLATLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYD 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I +P  G I   +   +    Q +Q +M +     L+ +   +
Sbjct: 150 LAKNRVEDAKRKLEYTQITAPFDGIISE-KVVENFAQVQANQVIMTL---QDLSDLEVVI 205

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY-----YEV 389
                          V          +    +    D     Q     TQ       Y V
Sbjct: 206 EI----------PHRVMLS--GVRNTRAIAELSAIPDQQFDLQLRTYSTQPSPDSQTYSV 253

Query: 390 ILKITDLAFSDNNIELRNGFPAEVL 414
           +L   DL        +  G  A+VL
Sbjct: 254 VLGFEDL----KGFRVMPGMSAKVL 274


>gi|237709825|ref|ZP_04540306.1| ABC transporter permease [Bacteroides sp. 9_1_42FAA]
 gi|229455918|gb|EEO61639.1| ABC transporter permease [Bacteroides sp. 9_1_42FAA]
          Length = 416

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 25/202 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+   RL L+     ++      ++     K L E
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQERLSLKQDRIGMQKDFLIKKRRYGQYKRLME 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  +++ D  Q             E     K  L  ++E   + +L     +  +  ++ 
Sbjct: 168 EQLIAREDYLQA-----------TEEYEAAKEQLSVLDERIRQDSLFRLTQISSLDENIM 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+ A    +L       E   + +PI G +   ++          + + +I+     
Sbjct: 217 NMKRSLALVRERL-------ENLKVKAPIDGQVGNLEA-QIGQSISAGEHIGQIITAD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTAT 349
             ++A +    ++ V +   A 
Sbjct: 267 LKVQALIDEHYVERVVQELPAD 288



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 81/227 (35%), Gaps = 22/227 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G++L    ++ + +   G +++   E G+ + +G  +L   +       +++   +
Sbjct: 62  IRVIGQVLPS-RMIYLDAIEGGRVEERLHEEGAMVKKGDAILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY- 155
             ++  ++N R  ++ E+ +L              + R  Q    + +            
Sbjct: 121 AYQENELRNTRISMEQERLSLKQDRIGMQKDFLIKKRRYGQYKRLMEEQLIAREDYLQAT 180

Query: 156 -GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +    L +   R+R   L RL    + S L   + + ++ L +++   E       
Sbjct: 181 EEYEAAKEQLSVLDERIRQDSLFRL---TQISSLDENIMNMKRSLALVRERLEN------ 231

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              + +  +      L   I +  +   HI ++   A+L+    + E
Sbjct: 232 --LKVKAPIDGQVGNLEAQIGQSISAGEHIGQIIT-ADLKVQALIDE 275


>gi|149174755|ref|ZP_01853380.1| probable multidrug efflux pump [Planctomyces maris DSM 8797]
 gi|148846449|gb|EDL60787.1| probable multidrug efflux pump [Planctomyces maris DSM 8797]
          Length = 303

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 58/142 (40%), Gaps = 9/142 (6%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQ-KNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +   +Q+ R      LE+  +I+++ +N +  ++      N E ++        +EQ Q 
Sbjct: 99  EIRYSQKARDTAYVELEMNLDINKRVRNTISKLDIKRLTLNAEKSDL------QIEQAQL 152

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
            F     +L  ++   E+  I++P  G +   +  S+    +    ++++V  +K   + 
Sbjct: 153 EFEMNKLQLNEIDAQIEETKIIAPFDGIVTK-KFRSTGEVVRHGDEVLELV-STKRVKVE 210

Query: 332 AKVTPKQIQHVKKGYTATVRFP 353
           + V  +     + G    V+  
Sbjct: 211 SYVNIEDTWMFQVGTPVQVQLD 232


>gi|332162231|ref|YP_004298808.1| macrolide transporter subunit MacA [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666461|gb|ADZ43105.1| macrolide transporter subunit MacA [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861192|emb|CBX71448.1| putative macrolide-specific efflux protein macA [Yersinia
           enterocolitica W22703]
          Length = 370

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 92/293 (31%), Gaps = 19/293 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++         Q              V   G     R + +       +    +++ ++ 
Sbjct: 24  IIRHLMAPTPVQFQTVKVANRDLQQNVLATGKLDAVRKVDVGAQVSGQLEKLYVEIGDQV 83

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              + L     +         E    +  DLN Q     K+ L+L      ++  L  + 
Sbjct: 84  KQGQLLAMIDPQQAQNQIKEVE---ATLQDLNAQLGQ-AKAELQLAAVTLRRQQDLAKLQ 139

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            +  +   + +  L      +E          + L       +   I +P+ G +V   +
Sbjct: 140 AVSRQDLDQASTALAVKKAQVETINAQINKTKASLDTANINLDYTKISAPMDGDVVQITT 199

Query: 306 FSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                     Q   ++ +        + A+V+   + H+K G  A+  F    D  EK+F
Sbjct: 200 LQGQTVIAAQQAPNILTLA-DMSTMLVNAQVSEADVIHLKPGMKAS--FTVLGD-PEKRF 255

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             +++ I P   + ++ +    +Y    ++ +       + L+    A+V   
Sbjct: 256 DGVLKDIQPTPEKVNDAI----FYSARFEVPNPDRL---LRLQ--MTAQVSIQ 299



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 55/133 (41%), Gaps = 6/133 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ +V ++G++     V ++ +  SG ++K  VE G Q+ QG  L   +  +  + I   
Sbjct: 46  LQQNVLATGKLDAVRKV-DVGAQVSGQLEKLYVEIGDQVKQGQLLAMIDPQQAQNQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDF----LNNKYDVLEKAFESREE-QLLDFLGKYHSTCSKVFN 154
           + ++++L   +   K+ L      L  + D+ +    SR++               +  N
Sbjct: 105 EATLQDLNAQLGQAKAELQLAAVTLRRQQDLAKLQAVSRQDLDQASTALAVKKAQVETIN 164

Query: 155 YGISSVYRSLKMK 167
             I+    SL   
Sbjct: 165 AQINKTKASLDTA 177


>gi|317503929|ref|ZP_07961937.1| AcrA/AcrE family multidrug resistance protein [Prevotella salivae
           DSM 15606]
 gi|315664955|gb|EFV04614.1| AcrA/AcrE family multidrug resistance protein [Prevotella salivae
           DSM 15606]
          Length = 425

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 5/68 (7%)

Query: 56  VVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +  I+        SG I K  V  G  +  G  L T +       +   + S+   R  +
Sbjct: 79  IKGIQDVEVRPKVSGFITKVYVHEGQAVKTGQLLFTIDSETYQAAVRQAQASVNTARAQL 138

Query: 111 DTEKSALD 118
           +T +   +
Sbjct: 139 NTARLTFE 146


>gi|294053587|ref|YP_003547245.1| efflux transporter, RND family, MFP subunit [Coraliomargarita
           akajimensis DSM 45221]
 gi|293612920|gb|ADE53075.1| efflux transporter, RND family, MFP subunit [Coraliomargarita
           akajimensis DSM 45221]
          Length = 475

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 73/199 (36%), Gaps = 14/199 (7%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           +SG I  +     + +   G +    V  G Q+++G  L    D +    +   +     
Sbjct: 94  ASGWIEADPLPFHVAALNDGFVDTVHVLEGEQVIEGQLLARLVDDDAKLDLATAQAVHGK 153

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFE---SREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
               +   ++ +   +     L    E   +R E+L D   + H+          ++  R
Sbjct: 154 QTAALAEAQAVVRATDASLKRLALEIETSKARLEELKDEETRLHAVGPN------AAPER 207

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L     R+ +     L LE++ +   A L++ +  +   +   E   V++ ++ +++  
Sbjct: 208 ELAQSRLRVLTQRSVILALESRRAEFEANLAARKAAVEGARQQLE---VAKAEVARKQLA 264

Query: 223 VYKSTLELRENIHEQKNML 241
           + +   E+R  I      L
Sbjct: 265 LDRM--EIRSPISGIIQKL 281



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 65/220 (29%), Gaps = 31/220 (14%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +++ L    +  +     +K L  +   S+  L + +    +          E++    
Sbjct: 153 KQTAALAEAQAVVRATDASLKRLALEIETSKARLEELKDEETRLHAVGPNAAPERELAQS 212

Query: 243 HINELYDEA-NLEFANYLKEISRDLEQNQRTFADEMSKLTIL-------EKTREQKTILS 294
            +  L   +  L   +   E   +L   +        +L +        +   ++  I S
Sbjct: 213 RLRVLTQRSVILALESRRAEFEANLAARKAAVEGARQQLEVAKAEVARKQLALDRMEIRS 272

Query: 295 PIAGTIVYNQSFSSSNYAQQS------------QPLMKIVPHSKLTYIRAKVTPKQIQHV 342
           PI+G I          +                  + KI         R  V  ++   +
Sbjct: 273 PISGIIQKL-------FVSPGYKRMARMDDPESSTVAKIF-SPDALQARIDVPLEEAAQL 324

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           + G    +R  +  D     F A + +I      Q N LQ
Sbjct: 325 QIGQAVRLRSVYLQDQ---VFNARVTRIYGQADLQRNTLQ 361


>gi|283834995|ref|ZP_06354736.1| secretion protein, HlyD family [Citrobacter youngae ATCC 29220]
 gi|291069281|gb|EFE07390.1| secretion protein, HlyD family [Citrobacter youngae ATCC 29220]
          Length = 355

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 72/196 (36%), Gaps = 19/196 (9%)

Query: 17  LKRMTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
             R   +SI   + +  W I+     P+    +    +    + V      SG + +  V
Sbjct: 8   FARWVRVSIAAFLVIFAWFIVADIWIPLTPDSTVMRVVTPVSSRV------SGYVSQVYV 61

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR-------CHIDTEKSALDFLNNKYD 125
            N SQ+ +G  L   +     + ++  +++++  +         I + ++ L        
Sbjct: 62  HNNSQVKKGDLLYELDPTPFINKVEAAQIALEQAKLSNQQLDAQIASARANLRTAQFNAR 121

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             +  F+ R ++L        S   KV     +S  +S+      ++++ + R + ++  
Sbjct: 122 NDKTTFD-RYQRLSAMQNVSQSDLDKVRTAWQTS-EQSVAALNASIQNLLIQRGERDDSR 179

Query: 186 SLLRALLSSHQKDLTM 201
           ++      +  ++  +
Sbjct: 180 NVTLQKYRNALEEAQL 195


>gi|317047991|ref|YP_004115639.1| RND family efflux transporter MFP subunit [Pantoea sp. At-9b]
 gi|316949608|gb|ADU69083.1| efflux transporter, RND family, MFP subunit [Pantoea sp. At-9b]
          Length = 384

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 38/123 (30%), Gaps = 5/123 (4%)

Query: 56  VVEIK--SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID-- 111
           V  ++     SG I +     G  + +G  L T +D      ++  +  +   R      
Sbjct: 65  VQSVQLRPRVSGYIDQVNYREGDDVKKGQVLFTIDDRTYRAALEQAQAELAQARSQAALA 124

Query: 112 -TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            +E +  + L     V  +  E R            S  + V    ++  +  +   +  
Sbjct: 125 RSESARTEKLIGTLAVSREEAEQRRSAASQAQATVLSAQAAVDMAQLNLDFTRVTAPIDG 184

Query: 171 MRS 173
             S
Sbjct: 185 RAS 187


>gi|168704773|ref|ZP_02737050.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 676

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 70/225 (31%), Gaps = 11/225 (4%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERI 222
           L  +  R R +Y  R D  N    L+ +  S   +   +    +   VS + +  +Q + 
Sbjct: 111 LTEQQKRDRILYHPR-DTGNPKKPLKRIRESMPVEARQIVAFMDDQLVSARMEGAKQIKD 169

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDLEQNQRTFADEMSKL 280
              S  +  E   +  +    + E            L ++       +NQ     +++K 
Sbjct: 170 SAVSAKKNSEEGVKAADEKLRVTEKTMGIAGSQRERLDDLITLTRFRENQDQAVSQIAKS 229

Query: 281 TI----LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
                       +  I S + GTI          Y +    +M+I   +    I  ++  
Sbjct: 230 DADYKEAVVLMGRHQIRSGVNGTIRTIAKR-PGEYVKAGDKIMEI-EGTDKVRIEGQLDV 287

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           + I+ V+ G    V  P      E       + +  +      + 
Sbjct: 288 QYIRAVRIGMEVIVE-PALPSAPEASHSGHRQAVTGVTVTAHPDG 331


>gi|134294077|ref|YP_001117813.1| RND family efflux transporter MFP subunit [Burkholderia
           vietnamiensis G4]
 gi|134137234|gb|ABO58348.1| efflux transporter, RND family, MFP subunit [Burkholderia
           vietnamiensis G4]
          Length = 365

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 62/200 (31%), Gaps = 17/200 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V+ + ++  + +V       +  +   +    +    +D A     N   E     +  
Sbjct: 83  FVAGSRVSAGQTLVQLYDAPEQAKLAGLQAKADYTRRQFDRAVQLVPNG-AEPKATFDAR 141

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +       + +        QK I +P +G I   +  +   Y     P+  +     + Y
Sbjct: 142 RYELDAARADIRETRAVITQKLIRAPFSGVI-GLRRVNLGQYLNPGDPIATLT-DLGVLY 199

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
               V  K++  V  G T  V    Y       F+  +  I+P +  +  N+  Q     
Sbjct: 200 ANFTVPQKELSRVSLGQTVRVTTDAYPGRT---FEGHVTAIEPQVGDETRNITVQ----- 251

Query: 390 ILKITDLAFSDNNIELRNGF 409
                    ++    LR G 
Sbjct: 252 ------ATVTNTGQLLRPGM 265


>gi|330995234|ref|ZP_08319145.1| auxiliary transport protein, membrane fusion protein family protein
           [Paraprevotella xylaniphila YIT 11841]
 gi|329575951|gb|EGG57471.1| auxiliary transport protein, membrane fusion protein family protein
           [Paraprevotella xylaniphila YIT 11841]
          Length = 328

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 71/200 (35%), Gaps = 11/200 (5%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             G++   +    + S   G I  F V+ G  +  G  L+  E  +    +   + + + 
Sbjct: 39  VQGQMEASEYR--VSSKVPGRILHFYVKEGDHVRAGDTLVVLEAPDVAAKLSQAEAAGQA 96

Query: 106 LRC--HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            +         +  + L   Y++ +KA     +  LD   K +   +++F  G+ S  + 
Sbjct: 97  AQAIKEKADRGTRAEQLQGAYEMWQKA-----KAGLDIAEKSYHRVNRLFEEGVMSAQK- 150

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-LNQQERI 222
                   +++         +  + R       K+    +    K A+++ +   ++  +
Sbjct: 151 RDEAYANYQAMKATERAARAQYEMARNGAQREDKEAAAAQVARAKGAIAEVESYMRETIL 210

Query: 223 VYKSTLELRENIHEQKNMLR 242
           + +   E+ E   E   ++ 
Sbjct: 211 LAQMDGEVSEIFPETGELVG 230



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 68/241 (28%), Gaps = 16/241 (6%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            + D   ++  L+      QK    + ++ EK+    N L ++  +  +   E   N   
Sbjct: 102 EKADRGTRAEQLQGAYEMWQKAKAGL-DIAEKSYHRVNRLFEEGVMSAQKRDEAYANYQA 160

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            K   R     Y+ A        KE +       +        +  +E    +  +L+ +
Sbjct: 161 MKATERAARAQYEMARNGAQREDKEAAAAQVARAKGA------IAEVESYMRETILLAQM 214

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G +      +         P+M I          A    +  + +  G      F  Y 
Sbjct: 215 DGEVSEIFPET-GELVGTGAPIMNITMLDDRW---ATFNVR--EDLLSGLAVGKEFTAYV 268

Query: 357 DIREKKFKAIIEKI-DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
               K  K  +  + D          +T   +++               LR G    V+ 
Sbjct: 269 PAFGKDIKLKVTYMKDRGTYAAWKATKTTGQFDLKTFEVRAVPVGVKEVLRPGM--SVII 326

Query: 416 T 416
            
Sbjct: 327 K 327


>gi|326934160|ref|XP_003213162.1| PREDICTED: keratin, type I cytoskeletal 14-like, partial [Meleagris
           gallopavo]
          Length = 544

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 75/223 (33%), Gaps = 11/223 (4%)

Query: 75  GSQILQGTPLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           G+ +     LL  ++   T D    K  + + LR  ++++ + L  + ++  +     E 
Sbjct: 258 GATVDNANLLLQIDNARLTADDFRTKFETEQALRLSVESDINGLRRVLDELTLSRADLEM 317

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           + E L + L        +  N     V   + +++     I L ++ L        +L  
Sbjct: 318 QIENLKEELAYLKKNHEEEMNALRGQVGGEISVEMDAAPGIDLTKI-LAEMREQYESLAE 376

Query: 194 SHQKDLTM-----MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
            +++D         + L  + A++   L   +  +     ELR  I   +  L+      
Sbjct: 377 KNRRDAEQWFFSKTEELNREVAINTEQLQSGKTEIT----ELRRTIQSLEIDLQSQLSTK 432

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                  A+        L Q Q        +L  L    E++ 
Sbjct: 433 AALEGTLADTEARYGTQLAQLQALITSVEEQLAELRCDMERQN 475


>gi|326338227|gb|EGD62056.1| Macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. 1125]
 gi|326346204|gb|EGD69942.1| Macrolide-specific efflux protein MacA [Escherichia coli O157:H7
           str. 1044]
          Length = 339

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 79  LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRN 138

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 139 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 197

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 198 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 250

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 251 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 289



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 14  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 72

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++   L D      +T   V    I +
Sbjct: 73  EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDL--DTAATEMAVKQAQIGT 130

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 131 IDAQIKRNQASLDTAKTN 148


>gi|315179204|gb|ADT86118.1| Membrane-fusion protein [Vibrio furnissii NCTC 11218]
          Length = 366

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 78/240 (32%), Gaps = 16/240 (6%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           LG  ++   +  N     + R L      +      +++L  +++  R +  + +    +
Sbjct: 36  LGALNAEERREPNADTIPLARVLYQTF--VAQPTDKKIELYGRTAPNRQVRLAAEFGGRI 93

Query: 202 MKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
              L EK  AV+Q  +      + +           +      + E   +A     N   
Sbjct: 94  QALLVEKGQAVTQGQV------IARIETGDLAAQLARARAQLRVREQEYQAAKSLKNRGL 147

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           +            AD  ++L+ +E       + +P    +V        +Y     P+  
Sbjct: 148 QGEVAYTNALAARADANAELSRVELALRHTQVRAPFDA-VVELLPVEHGDYVGIGDPIAT 206

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           ++  +    I A V+ + IQH+  G +A VR      +        I  +  +     + 
Sbjct: 207 LIELN-PLVIEADVSERHIQHLAVGQSARVRL-----MDGMLLDGTIRYLARVSDPATHT 260


>gi|260771190|ref|ZP_05880117.1| membrane-fusion protein [Vibrio furnissii CIP 102972]
 gi|260613787|gb|EEX38979.1| membrane-fusion protein [Vibrio furnissii CIP 102972]
          Length = 366

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 78/240 (32%), Gaps = 16/240 (6%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           LG  ++   +  N     + R L      +      +++L  +++  R +  + +    +
Sbjct: 36  LGALNAEERREPNADTIPLARVLYQTF--VAQPTDKKIELYGRTAPNRQVRLAAEFGGRI 93

Query: 202 MKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
              L EK  AV+Q  +      + +           +      + E   +A     N   
Sbjct: 94  QALLVEKGQAVTQGQV------IARIETGDLAAQLARARAQLRVREQEYQAAKSLKNRGL 147

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           +            AD  ++L+ +E       + +P    +V        +Y     P+  
Sbjct: 148 QGEVAYTNALAARADANAELSRVELALRHTQVRAPFDA-VVELLPVEHGDYVGIGDPIAT 206

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           ++  +    I A V+ + IQH+  G +A VR      +        I  +  +     + 
Sbjct: 207 LIELN-PLVIEADVSERHIQHLAVGQSARVRL-----MDGMLLDGTIRYLARVSDPATHT 260


>gi|238752021|ref|ZP_04613505.1| HlyD family secretion protein [Yersinia rohdei ATCC 43380]
 gi|238709721|gb|EEQ01955.1| HlyD family secretion protein [Yersinia rohdei ATCC 43380]
          Length = 401

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 68/182 (37%), Gaps = 24/182 (13%)

Query: 15  ASLKRMTLLSIIGIIGLITW-------------SILLPIEISVSSSGEILNEDNVVEIKS 61
             +  + +L I G   L +W             +    +E +V + G I  +  V  + +
Sbjct: 10  RFIGLVVVLLIAGGALLFSWISPADKPNFITAPAETRTLEQTVLADGTIKAQKQV-TVGA 68

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS------ 115
             SG IK   V  G Q+ +G  +   +D+   + +   + ++KN+R     + +      
Sbjct: 69  QVSGQIKALHVTLGQQVEKGQLVAEIDDLTQQNALKDAQEALKNVRAQRAAKIATQKNNQ 128

Query: 116 ----ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                   +  K   +   F+S +  L     + ++  +++    I+     L +  T++
Sbjct: 129 LTYQRQQHILAKGLGVPADFDSAKATLESTQAEINALDAQITQAEIAVSTAKLNLGYTKI 188

Query: 172 RS 173
            S
Sbjct: 189 NS 190



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 80/257 (31%), Gaps = 28/257 (10%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              S  ++AL  +  + +   + + E  +   QN L   +  +     +    I  QKN 
Sbjct: 68  AQVSGQIKALHVTLGQQVEKGQLVAEIDDLTQQNALKDAQEALKNVRAQRAAKIATQKNN 127

Query: 241 LR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE-------KTREQKT 291
                  +      L            LE  Q       +++T  E              
Sbjct: 128 QLTYQRQQHILAKGLGVPADFDSAKATLESTQAEINALDAQITQAEIAVSTAKLNLGYTK 187

Query: 292 ILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA- 348
           I SPI GT+V             Q +  ++K V       + A+++   +  VK G    
Sbjct: 188 INSPITGTVVAIPVEEGQTVNAVQSAPTIIK-VAQLDTMTVEAQISEADVVKVKAGMPVY 246

Query: 349 -TV------RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--YYEVILKITDLAFS 399
            T+      RF       E    +I ++     S   ++  T    YY  +  +     +
Sbjct: 247 FTILGEPGERFSARLRAIEPAPDSINDETTTSSSTSSSSSTTSTAIYYNGLFDV-----A 301

Query: 400 DNNIELRNGFPAEVLFT 416
           + N  LR    A+V   
Sbjct: 302 NPNGALRISMTAQVYIV 318


>gi|237725608|ref|ZP_04556089.1| ABC transporter permease [Bacteroides sp. D4]
 gi|229436295|gb|EEO46372.1| ABC transporter permease [Bacteroides dorei 5_1_36/D4]
          Length = 416

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 25/202 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+   RL L+     ++      ++     K L E
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQERLSLKQDRIGMQKDFLIKKRRYGQYKRLME 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  +++ D  Q             E     K  L  ++E   + +L     +  +  ++ 
Sbjct: 168 EQLIAREDYLQA-----------TEEYEAAKEQLSVLDERIRQDSLFRLTQISSLDENIM 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+ A    +L       E   + +PI G +   ++          + + +I+     
Sbjct: 217 NMKRSLALVRERL-------ENLKVKAPIDGQVGNLEA-QIGQSISAGEHIGQIITAD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTAT 349
             ++A +    ++ V +   A 
Sbjct: 267 LKVQALIDEHYVERVVQELPAD 288



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 81/227 (35%), Gaps = 22/227 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G++L    ++ + +   G +++   E G+ + +G  +L   +       +++   +
Sbjct: 62  IRVIGQVLPS-RMIYLDAIEGGRVEERLHEEGAMVKKGDAILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY- 155
             ++  ++N R  ++ E+ +L              + R  Q    + +            
Sbjct: 121 AYQENELRNTRISMEQERLSLKQDRIGMQKDFLIKKRRYGQYKRLMEEQLIAREDYLQAT 180

Query: 156 -GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +    L +   R+R   L RL    + S L   + + ++ L +++   E       
Sbjct: 181 EEYEAAKEQLSVLDERIRQDSLFRL---TQISSLDENIMNMKRSLALVRERLEN------ 231

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              + +  +      L   I +  +   HI ++   A+L+    + E
Sbjct: 232 --LKVKAPIDGQVGNLEAQIGQSISAGEHIGQIIT-ADLKVQALIDE 275


>gi|227113490|ref|ZP_03827146.1| hypothetical protein PcarbP_11027 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 451

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 73/195 (37%), Gaps = 15/195 (7%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           +  + N     +R+ L  I+ ++ ++    L+P+  SV +  EI+    V  +++P +G+
Sbjct: 173 RRRQTNTSPKKRRLILAGIVALMLIL----LIPVRQSVLAPAEIVAHRPV-MVRAPVAGV 227

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE----------KSA 116
           +    V     +    PL+  +  E  + ++  + +                     K++
Sbjct: 228 VDDILVRPNQTVSANQPLVRLDVRELENRLESARQAFATADAQYRQAQQQALFDANSKAS 287

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           L  L ++ +  +   +  + Q              +F+     + RS+ +    M     
Sbjct: 288 LAVLQSRREQAQSEMDFLQRQQERMQLASPRDGVAIFDDSSDWIGRSVAVGERIMMIADP 347

Query: 177 NRLDLENKSSLLRAL 191
           + ++LE +     A+
Sbjct: 348 HDVELEIQLPAADAI 362



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 53/330 (16%), Positives = 110/330 (33%), Gaps = 18/330 (5%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L   +    + L  +  +      A     E+L D      S+  K      ++  +  +
Sbjct: 126 LPLRLPQGDTPLVLVLARDSAWLPAEIVLLEKLADAYAHAWSSLLKQRRRQTNTSPKKRR 185

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM--MKNLFEKNAVSQNDLNQQERIV 223
           + L  + ++ L  L    +S L  A + +H+  +    +  + +   V  N      + +
Sbjct: 186 LILAGIVALMLILLIPVRQSVLAPAEIVAHRPVMVRAPVAGVVDDILVRPNQTVSANQPL 245

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +  +   EN  E         +       + A +       L   Q       S++  L
Sbjct: 246 VRLDVRELENRLESARQAFATADAQYRQAQQQALFDANSKASLAVLQSRREQAQSEMDFL 305

Query: 284 EKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQH 341
           ++ +E+  + SP  G  I  + S          + +M I  PH     I  ++       
Sbjct: 306 QRQQERMQLASPRDGVAIFDDSSDWIGRSVAVGERIMMIADPHDVELEI--QLPAADAIA 363

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           ++ G  A VR             A +E+I    +   +N+     Y +  +     F+ +
Sbjct: 364 LENG--ADVRL-FLNVAPNSAQDARLEQIGYRAAPTPDNVMA---YRLRAR-----FTQD 412

Query: 402 NIELRNGFPAEVLFTAKNTTLAQEII-HPI 430
           + +LR G         K T L   ++  P+
Sbjct: 413 DPQLRVGLKGTAKLYGKRTVLFVYLLRKPL 442


>gi|224071227|ref|XP_002194934.1| PREDICTED: CAP-GLY domain containing linker protein 1 isoform 3
            [Taeniopygia guttata]
          Length = 1435

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 69/198 (34%), Gaps = 6/198 (3%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  K+  + +   ++       D L  +  VL++ F S  ++  +       T  K+  
Sbjct: 813  ELQGKEQKLLDFEKNLSAVNQVKDSLEKELQVLKEKFTSAADEAENVQQAMQETVKKLNQ 872

Query: 155  YG-----ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                   +SS    LK  LT M      R + E +    +A L +   ++          
Sbjct: 873  KEEQFALMSSELEQLKSSLTEMEGKLREREEREQQLMEAKAKLENDIAEIMKSSGDSSAQ 932

Query: 210  AVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                ND  +  ER + +  LEL +   +   + +++ +   +A       LK    +L+ 
Sbjct: 933  LTRMNDELRLKERQLEQIQLELTKANEKAAQLEKNVEQTTQKAEQSQQETLKIHQAELKT 992

Query: 269  NQRTFADEMSKLTILEKT 286
             Q    D   ++   +  
Sbjct: 993  LQDQLTDMKKQIESSQHQ 1010



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 67/209 (32%), Gaps = 11/209 (5%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF----ESREEQLLDFLGKY 145
               + +  K+  I+ L    D E++ +    +    +E+      +  +  +L+   K 
Sbjct: 351 TALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKM 410

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               + V       V   L       R +   +  +E +S     L +  + +   +K L
Sbjct: 411 DQLRAMVEAADREKV-ELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKEL 469

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA-----NLEFANYLK 260
            +     +   ++ +R +  + +           + R +     E       L+ + ++ 
Sbjct: 470 EQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLDSSKHID 529

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQ 289
           ++   L    +  +    K+    K  + 
Sbjct: 530 DVDTSLS-LLQEISSLQEKMAAAGKEHQN 557


>gi|165926815|ref|ZP_02222647.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|167424531|ref|ZP_02316284.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|165921166|gb|EDR38390.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|167056413|gb|EDR66182.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Mediaevalis str. K1973002]
          Length = 385

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 79/256 (30%), Gaps = 28/256 (10%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              S  ++AL  +  + +   + + E  +   QN L   E  +     +    I  QKN 
Sbjct: 52  AQVSGQIKALHVTLGQQVEKNQLVAEIDDLAQQNALKDAEEALKNVQAQRAAKIATQKNN 111

Query: 241 LR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE-------KTREQKT 291
                  +      +        I   LE  Q   +   +++   E              
Sbjct: 112 QLTYQRQQQILAKGVGVRADFDSIKATLEATQAEISALDAQIAQAEIAVSTAKLNLGYTK 171

Query: 292 ILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA- 348
           I SPIAGT+V             Q +  ++K V       + A+++   +  VK G    
Sbjct: 172 ISSPIAGTVVAIPVEEGQTVNAVQSAPTIIK-VAQLDTMTVEAQISEADVVKVKTGMPVY 230

Query: 349 -------TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--YYEVILKITDLAFS 399
                    RF       E    +I ++     S   ++  +    YY  +  + +   +
Sbjct: 231 FTILGEPEKRFSATLRAIEPAPDSINDETTTTSSSTSSSSSSSTAIYYNGLFDVANPTGA 290

Query: 400 DNNIELRNGFPAEVLF 415
                LR    A+V  
Sbjct: 291 -----LRISMTAQVYI 301



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 17/153 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V + G I  +  V  + +  SG IK   V  G Q+ +   +   +D+   + +   
Sbjct: 32  LEQTVLADGTIKAQKQV-TVGAQVSGQIKALHVTLGQQVEKNQLVAEIDDLAQQNALKDA 90

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++KN++                     K    +  QL     +              S
Sbjct: 91  EEALKNVQAQRAA----------------KIATQKNNQLTYQRQQQILAKGVGVRADFDS 134

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +  +L+     + ++       E   S  +  L
Sbjct: 135 IKATLEATQAEISALDAQIAQAEIAVSTAKLNL 167


>gi|221067346|ref|ZP_03543451.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
 gi|220712369|gb|EED67737.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
          Length = 413

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 43/120 (35%), Gaps = 3/120 (2%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---D 111
             V+++   SG ++    + G+ +  G  L T +       +D  +  +   +  +    
Sbjct: 75  QRVDVQPRVSGAVQAVHFKEGALVKAGDLLFTVDPAPYVAEVDRAEAQVVAAKARMAYTQ 134

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           +E      L ++  + +K ++ R     +      +  + +    ++  Y  +K  +   
Sbjct: 135 SESERATRLWDERAIAQKEYDERVNARREADANLRAAQAALQTARLNLGYTQVKAPVNGR 194



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 35/106 (33%), Gaps = 8/106 (7%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V++ D  + + +  K+ +   ++  E+   L     +  +   E  N  +E   +L   
Sbjct: 112 YVAEVDRAEAQVVAAKARMAYTQSESERATRLWDERAIAQKEYDERVNARREADANLRAA 171

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           Q       + L           + +P+ G +   +  +  N     
Sbjct: 172 Q-------AALQTARLNLGYTQVKAPVNGRVGRIEV-TVGNLVSSG 209


>gi|114618446|ref|XP_001175228.1| PREDICTED: huntingtin-interacting protein 1, partial [Pan
           troglodytes]
          Length = 535

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 5/192 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           LI+     I  L+  ++  K+    +  +        E+   +      +    C +   
Sbjct: 146 LIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEAELAEQQHLRQQAADDC-EFLR 204

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +  + R  +      RS+       +        L   + + +    +L  KNA    
Sbjct: 205 AELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNA---- 260

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ +Q  +  ++ ++L     E ++ L  I++       E    L+ + ++L  +QR   
Sbjct: 261 EVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQ 320

Query: 275 DEMSKLTILEKT 286
                L    ++
Sbjct: 321 VLQGSLETSAQS 332


>gi|91226923|ref|ZP_01261520.1| putative secretion protein [Vibrio alginolyticus 12G01]
 gi|91188886|gb|EAS75171.1| putative secretion protein [Vibrio alginolyticus 12G01]
          Length = 354

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 65/210 (30%), Gaps = 21/210 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +   +     SL+    +  ++Y  R       +  +A   +  ++   +  L ++  
Sbjct: 78  RKYKIALEQAELSLQSAYEKEATLYSQREAALANIARAQATFDNAHREYNRLLTLSKQKV 137

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +SQ+ L+        S   L+      K +   + +   ++                   
Sbjct: 138 ISQSTLDNAFAQNQVSRAALKAERQNLKVIEAQLGDQKGQSTAVRI-------------- 183

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  + +   +       +L+P  G +   Q       A  + PL+  VP     ++
Sbjct: 184 -----AKNGIEKAQLDLANTAVLAPSDGVVTNLQL-EVGTMANTNMPLLTFVPTGS-LWV 236

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            A    K + +V K + A V F        
Sbjct: 237 AADFREKSVANVDKTFHALVTFDANPGSVY 266



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 70/204 (34%), Gaps = 10/204 (4%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M  + K  H   ++ + +L I+  + +I      P+       G ++      ++    S
Sbjct: 1   MTADQKFKHW--MRTLIVLFIVLFLYIIIADRHAPLTTEGRVQGYVV------QVAPEVS 52

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    +EN   + +G  L T +D +    ++  ++S+++      T  S  +      
Sbjct: 53  GKVTDVLIENNQSVQKGDVLFTIDDRKYKIALEQAELSLQSAYEKEATLYSQREAALANI 112

Query: 125 DVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +  F++  RE   L  L K         +   +    S        +++ +    L 
Sbjct: 113 ARAQATFDNAHREYNRLLTLSKQKVISQSTLDNAFAQNQVSRAALKAERQNLKVIEAQLG 172

Query: 183 NKSSLLRALLSSHQKDLTMMKNLF 206
           ++     A+  +         +L 
Sbjct: 173 DQKGQSTAVRIAKNGIEKAQLDLA 196


>gi|73972041|ref|XP_532047.2| PREDICTED: similar to centrosomal protein 1 [Canis familiaris]
          Length = 2589

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 83/222 (37%), Gaps = 5/222 (2%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             G++       + F+ ++     + KK+    +      ++   + +  K  + +   + 
Sbjct: 1938 EGNEAKLAQQEMMFQRLQKERECEEKKLEASKVTLKEQQQQLEKELMEQKGKLDQVLAKL 1997

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
               +      +     S+     +S   R L  +  ++ +     L L+ ++  +RA  S
Sbjct: 1998 LVAEERVRTLQEEGRWSETLEKTLSQTKRQLSEREQQLLAKSDELLALQKETDSMRADFS 2057

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQER-IVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              +      +   EK   S  +  + +R  + K+ LE ++     +  +  I ++  + +
Sbjct: 2058 LLRNQFLTERKKAEKQVASLKEALKIQRSQLEKNLLEQKQENSCMQREMATIEQVAQDNH 2117

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                   + + R+L Q QR + +   ++T  +    ++  +S
Sbjct: 2118 ----ERARRLMRELNQMQREYVELRKQMTNQKDLERRQMEIS 2155



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 74/219 (33%), Gaps = 18/219 (8%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                 K+  +  +       +S LD + ++     +  +  EEQL +     +    K 
Sbjct: 555 KAQKRGKEQQLDIMNKQYKQLESRLDEILSRIAKETEEIKDLEEQLTEGQIAANEALKKD 614

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-----------TM 201
               IS +   L+    + R        L+++   L   LS  +++             M
Sbjct: 615 LESVISGLQEYLETVKGQARQAQNECRKLQDEKETLLQRLSEVEQERDQLEIVAIDAENM 674

Query: 202 MKNLFE-KNAVSQND-----LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            K L E +NA+ +       L Q +  +     EL   +  +      + E  ++     
Sbjct: 675 RKELAELENALQEQHEVNISLQQTQGDLSAYEAELEAQLKIRDAEANQLKEELEKLRRLS 734

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILE-KTREQKTIL 293
                 +  +LE+ ++ F   + K  + E K +E   + 
Sbjct: 735 QLEQSALQAELEKEKQAFKTAVKKAQLSEGKDQENSELR 773



 Score = 43.1 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 78/214 (36%), Gaps = 23/214 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--- 149
             L    +  I  L+ +++T K       N+   L+   E+  ++L +   +        
Sbjct: 609 EALKKDLESVISGLQEYLETVKGQARQAQNECRKLQDEKETLLQRLSEVEQERDQLEIVA 668

Query: 150 --SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH-------QKDLT 200
             ++     ++ +  +L+ +     S+   + DL    + L A L          +++L 
Sbjct: 669 IDAENMRKELAELENALQEQHEVNISLQQTQGDLSAYEAELEAQLKIRDAEANQLKEELE 728

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            ++            L+Q E+   ++ LE  +   +       ++E  D+ N E    L+
Sbjct: 729 KLR-----------RLSQLEQSALQAELEKEKQAFKTAVKKAQLSEGKDQENSELRTQLQ 777

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           ++  D +  ++   D  S L  +     +   ++
Sbjct: 778 QLQDDNDLLKQQLKDFQSHLNHVVDGLIRPEEVA 811



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 80/217 (36%), Gaps = 8/217 (3%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVSIKN--LRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
             Q   L     +      D + ++ K   L   +   +  ++   +  D   +  +  E 
Sbjct: 1515 EQEEILKEINKVVAAKDSDFQSLNKKKEVLTGELQKLQKDIETARHNEDQHLQVLKESET 1574

Query: 137  QLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTR----MRSIYLNRLDLENKSSLLRA 190
             L     +  +  S+V      ++ + R L  K         S+   + DL+    L  +
Sbjct: 1575 LLQAKKAELENLKSQVSGQQQEMAVLDRELGHKKEELHLLQESMVQAKADLQEALRLGES 1634

Query: 191  LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
             ++     +  +K+L E+ +  + +LN Q          +++ I ++++ L+ +     +
Sbjct: 1635 EVTEKCNHIREVKSLLEELSFQKGELNVQISEKKTQLALIKQEIEKEEDNLQVVLGQMSK 1694

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
               E  N L  +  +  + Q        K++ LEKTR
Sbjct: 1695 HKTELKNILDMLQLENNELQGLKLQHDQKMSELEKTR 1731



 Score = 36.9 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 71/205 (34%), Gaps = 13/205 (6%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            D I+  + ++   R  +      L    ++    ++  +   E+  D       T     
Sbjct: 1420 DEIECIERTLLKRRAELREADRLLTEAESELSCTKEKTKHAVEKFTDAKRNLLQTEKDAE 1479

Query: 154  NYGISSVYRSLKM--KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM----KNLFE 207
                 +   ++ +     ++R +  +  DLE        +L    K +       ++L +
Sbjct: 1480 ELERRAQETAINLVKADQQLRLLQADTKDLEQHKMEQEEILKEINKVVAAKDSDFQSLNK 1539

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            K  V   +L + ++ +  +    R N  +   +L+    L      E  N   ++S   +
Sbjct: 1540 KKEVLTGELQKLQKDIETA----RHNEDQHLQVLKESETLLQAKKAELENLKSQVSGQQQ 1595

Query: 268  QNQ---RTFADEMSKLTILEKTREQ 289
            +     R    +  +L +L+++  Q
Sbjct: 1596 EMAVLDRELGHKKEELHLLQESMVQ 1620


>gi|71279693|ref|YP_267977.1| RND family efflux transporter MFP subunit [Colwellia
           psychrerythraea 34H]
 gi|71145433|gb|AAZ25906.1| efflux transporter, RND family, MFP subunit, AcrA/E family
           [Colwellia psychrerythraea 34H]
          Length = 359

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 84/262 (32%), Gaps = 36/262 (13%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLF--EKNAVSQNDLNQQERIVYKSTL-ELR 231
           Y+ +   E     + A +++ Q  +   + L   +K  V   D+ ++  ++      +L 
Sbjct: 57  YVVKSSTEAIFEGVAASITAKQTTIISSRLLARIDKINVRAGDIVKRGDVLITLENNDLS 116

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-------------QRTFADEMS 278
             + E +  +  +   Y EA+  F    +  ++ +                +        
Sbjct: 117 SRVIEAQEQVNAMIARYTEAHQNFQRAKELFNKKIASQFDLDKSKADYQSIKAELTAAKQ 176

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPK 337
            L   + T    T+ +PI G +V  +     N AQ  + L+ +  P S    + A+V  +
Sbjct: 177 SLAQAQTTLSYATLRAPINGKVVD-RFAEPGNTAQAGEKLLSLYNPLS--LRVEAQVREQ 233

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
               + +G +  V  P          + I+                   + + + +    
Sbjct: 234 LALTLTQGQSIKVELPTIKQNIVGLVEEIV----------PAANTGSRSFLIKVSLPYQE 283

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
                  L  G  A +L  A  
Sbjct: 284 ------NLLPGMYARLLIPAGQ 299



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 40/132 (30%), Gaps = 6/132 (4%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
             V++S   +       I S     I K  V  G  + +G  L+T E+ + +  +   + 
Sbjct: 68  EGVAAS---ITAKQTTIISSRLLARIDKINVRAGDIVKRGDVLITLENNDLSSRVIEAQE 124

Query: 102 SIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  +                L NK    +   +  +        +  +    +     +
Sbjct: 125 QVNAMIARYTEAHQNFQRAKELFNKKIASQFDLDKSKADYQSIKAELTAAKQSLAQAQTT 184

Query: 159 SVYRSLKMKLTR 170
             Y +L+  +  
Sbjct: 185 LSYATLRAPING 196


>gi|29501269|dbj|BAC67537.1| putative periplasmic protein [Pseudomonas sp. MIS38]
 gi|118917996|dbj|BAF40422.1| putative periplasmic protein [Pseudomonas sp. MIS38]
          Length = 362

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 68/220 (30%), Gaps = 12/220 (5%)

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           ++N   +  V + +L  Q+R       + +E     +N+    +    +     ++Y  +
Sbjct: 76  LQNTLRQAQVDEENLQAQKRATQAQLKQTKEIYQRYQNLQEDASISRQDFETAQSDYEVQ 135

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLM 319
              +L            ++   +       I++PI G +V             +Q  P++
Sbjct: 136 -QANLLSLDAQIKSAHIQIDTAKVNLAYTRIVAPIDGDVVGI-VTQEGQTVIANQLAPIL 193

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
             +       I+A+V+   + H+  G                K +         +     
Sbjct: 194 LKLADLDTMTIKAQVSEADVIHIAPGQQVYFTILGEDKRYYGKLRGTEPAPQNFLETPPA 253

Query: 380 NLQTQE---YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
               Q    +Y  + ++      + +  LR    A+V   
Sbjct: 254 GTPKQNTAVFYNALFEVP-----NPDHRLRISMTAQVRIV 288


>gi|71412527|ref|XP_808444.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70872651|gb|EAN86593.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 1104

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 65/215 (30%), Gaps = 10/215 (4%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L    D E   L +  +  +  L    +     L  +       E A      +  +   
Sbjct: 459 LTVRHDAELRSLREESQQLMDQLTSAREAHAEELQQVRKNQRKSESAVTRDAAKEFETTF 518

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRS-----IYLNRLDLENKSSLLRALLSSHQKD 198
           +  +   +     +      L  +L               ++LE   +  R      QK 
Sbjct: 519 RRMNERHEEARRALELEKGQLVRQLREAEQRCEDKQRRLEIELEKSEAARRDGERIQQKH 578

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               + L E     Q  + + +R    S  +L     + +  L  +    + A     + 
Sbjct: 579 DEKDRALAE----LQETVEELKRKG-GSVADLTSRNRKLQQELEQLRHDQETATRAKDSE 633

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           L+E+  DL + +R       +LT   + +E+  + 
Sbjct: 634 LQELRHDLAETRRRVVGLQDELTAARRMQEEVEVR 668



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 70/206 (33%), Gaps = 10/206 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL----EKAFESREEQLLDFLGKYH 146
           E   +       ++ L+     E ++L     +   L    E        QL     +  
Sbjct: 235 EFRAIEGQWTSRLERLQLEHINETASLRQEIERERQLVAHGESQLSETRNQLAKLTSQLE 294

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-KNL 205
             C +      S    +   ++ +     L R   E+K S  +  +   Q+ L    + L
Sbjct: 295 ELCRQREGDAHSRGTETFIGEIHQKAIERLQRAFEEDKQSTKQWFMEEQQRILNSHERTL 354

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            E     +  + + E  +  S  +LRE   E +     +     + +   A+ L+     
Sbjct: 355 HEIQNSHRAQVRRLEETLDASNRQLREMETEVQQYKTKLAGATLKPSSASADELR----- 409

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT 291
           L +  RT   ++++    ++  E+++
Sbjct: 410 LREELRTIRKQLNEAVDAKQRLERRS 435


>gi|327264999|ref|XP_003217296.1| PREDICTED: fas-binding factor 1 homolog [Anolis carolinensis]
          Length = 1085

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 86/201 (42%), Gaps = 11/201 (5%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +  +  E+      + +S +     ++ +   L+   ++  +L ++ + R ++ L+ + K
Sbjct: 506 VQLQLRESLAGYQAELLSAQTRLTELEGQVRRLELEKSQQKLLLESLQQRHQEDLELIEK 565

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            H    KV            + +   +   YL++     ++     LL+ HQ+ LT    
Sbjct: 566 AHRNRVKVIEDSYHQREERFQQENQELAQQYLSQCQNAEQAKS--ELLAQHQRRLT---E 620

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L ++ A   N L + +RI   S LE+R++  EQ   L+ +     +A     +Y + ++ 
Sbjct: 621 LEQEKAKELNRLQELQRI---SILEMRKDHEEQLQRLKRLKSQEIDAVTSATSYTRSLNG 677

Query: 265 DLEQNQR---TFADEMSKLTI 282
            ++Q ++     +D  +K+  
Sbjct: 678 IIDQMEKFSSNLSDLANKVEA 698



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 76/214 (35%), Gaps = 11/214 (5%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL---LDFLGKYHS 147
           E   L +L+++SI  +R   + +   L  L ++      +  S    L   +D + K+ S
Sbjct: 628 ELNRLQELQRISILEMRKDHEEQLQRLKRLKSQEIDAVTSATSYTRSLNGIIDQMEKFSS 687

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             S + N   ++ + + +      R        L+++ +  +  +   +  L  + +  E
Sbjct: 688 NLSDLANKVEATHHTTHQGLEIGARQRDEQLRVLQDRLARQQRDMEDERGRLQEVISKME 747

Query: 208 KNAVSQNDLNQQER--------IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                Q  L +QER         V      L E        L    E  + A        
Sbjct: 748 ARLNEQTRLLEQERWRVTTEQSKVESLQHSLEEQRRAMTQQLAMEREELERAKNSLLEEQ 807

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           K + +   + +R  A E S+L   ++  +++   
Sbjct: 808 KSVMQKCAEERRKLAAEWSELHTQQRLIKERAER 841


>gi|326674234|ref|XP_687391.4| PREDICTED: myosin-XVIIIa [Danio rerio]
          Length = 2218

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 17/229 (7%)

Query: 67   IKKFQVENGSQILQGTPL------LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
            I+   V+          L      L  E  +    ++  +  +  L        +     
Sbjct: 1710 IEDLHVQMDDISKSKQALEEQLSRLQREKNDLQSRMEEDQEDMNELMKKHKAAVAQSSQN 1769

Query: 121  NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
              +   L+   E   ++  D   K  +  S++     S V +SL  +          +L+
Sbjct: 1770 LAQISDLQAQLEEAMKEKQDVQEKLTALQSQLEFQEQSMVDKSLVSRQEAKIRELETKLE 1829

Query: 181  LE-NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-------LNQQERIVYKSTLELRE 232
             E  +   L +L++  +++L  +    ++ + S+N        L +Q R + +   EL +
Sbjct: 1830 FEKTQVKRLESLVARLKENLEKLTEERDQRSASENREKEQNKRLLRQIRDIKEEMAELAK 1889

Query: 233  NIHEQKNMLRHIN---ELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
               E       +    E  + AN      LK   + +   Q    DEM 
Sbjct: 1890 KEAEASRKKHELEMDIESLEAANQSLQADLKLAFKRIGDLQAAIEDEME 1938



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 76/217 (35%), Gaps = 8/217 (3%)

Query: 77   QILQGTPLLTFEDI-----ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            ++      +  +DI        + +   +    +L+  ++ ++  ++ L  K+       
Sbjct: 1707 EVEIEDLHVQMDDISKSKQALEEQLSRLQREKNDLQSRMEEDQEDMNELMKKHKAAVAQS 1766

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                 Q+ D   +      +     +     +L+ +L       +++  +  + + +R L
Sbjct: 1767 SQNLAQISDLQAQLEEAMKE--KQDVQEKLTALQSQLEFQEQSMVDKSLVSRQEAKIREL 1824

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
             +  + + T +K L    A  + +L +      + +        + K +LR I ++ +E 
Sbjct: 1825 ETKLEFEKTQVKRLESLVARLKENLEKLTEERDQRSASENREKEQNKRLLRQIRDIKEEM 1884

Query: 252  NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
              E A    E SR   + +       +    L+   +
Sbjct: 1885 -AELAKKEAEASRKKHELEMDIESLEAANQSLQADLK 1920



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 77/205 (37%), Gaps = 8/205 (3%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ-LLD 140
              L    D++    ++      ++++  +   +S L+F   +  +++K+  SR+E  + +
Sbjct: 1768 QNLAQISDLQ--AQLEEAMKEKQDVQEKLTALQSQLEF--QEQSMVDKSLVSRQEAKIRE 1823

Query: 141  FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK-SSLLRALLSSHQKDL 199
               K     ++V    + S+   LK  L ++      R   EN+     + LL   +   
Sbjct: 1824 LETKLEFEKTQV--KRLESLVARLKENLEKLTEERDQRSASENREKEQNKRLLRQIRDIK 1881

Query: 200  TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              M  L +K A +    ++ E  +       +    + K   + I +L      E  +  
Sbjct: 1882 EEMAELAKKEAEASRKKHELEMDIESLEAANQSLQADLKLAFKRIGDLQAAIEDEMESDD 1941

Query: 260  KEISRDLEQNQRTFADEMSKLTILE 284
             E   + E    T ++   ++  ++
Sbjct: 1942 NEDLINSEGASDTDSEVEDRVDGVK 1966



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 63/192 (32%), Gaps = 10/192 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                   +  + +L+   +  +     L  K   L    +  +  L     + H    K 
Sbjct: 1398 QQNKRQLERKLTDLQADNEEVQRVAQQLKKKCQRLTAELQDTKLHLEGQQSRNHDLEKKQ 1457

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
              F+   +     ++ + ++   +   +  L  +   LR  L     ++  +    E+  
Sbjct: 1458 RKFDSEQTQAQEEVQREKSQREKLSREKDMLTGEVFSLRQQLEDKDLEICAVNLKLEQME 1517

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                DLN QE     S  ++++ + + +  ++   E  DE             + LEQ +
Sbjct: 1518 AELQDLNSQESKDEASLAKIKKQLRDLEAKVKDQEEELDEQAGTI--------QMLEQAK 1569

Query: 271  RTFADEMSKLTI 282
                 EM +L  
Sbjct: 1570 LRLEMEMERLRQ 1581



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 78/227 (34%), Gaps = 20/227 (8%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             ++ +    L          I      + + R   ++    L+   ++   LEK  +  +
Sbjct: 1268 EKVEKERNELRLNSDRLESKITELSSELADERNTGESASQLLESETSERLRLEKDMKDLQ 1327

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             +      +  S   +V    +               S     +D ++     R      
Sbjct: 1328 AKFDAMKKQTESMEMEVMEARL------------IRASELNGEMDDDDTGGEWRLKYERA 1375

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             +++   K   ++    + ++ QQ +R + +   +L+ +  E + + + + +       E
Sbjct: 1376 IREIEFTKKRLQQEFDDKLEVEQQNKRQLERKLTDLQADNEEVQRVAQQLKKKCQRLTAE 1435

Query: 255  FANY------LKEISRDLEQNQRTF-ADEMSKLTILEKTREQKTILS 294
              +        +  + DLE+ QR F +++      +++ + Q+  LS
Sbjct: 1436 LQDTKLHLEGQQSRNHDLEKKQRKFDSEQTQAQEEVQREKSQREKLS 1482


>gi|320105237|ref|YP_004180828.1| RND family efflux transporter MFP subunit [Isosphaera pallida ATCC
           43644]
 gi|319752519|gb|ADV64279.1| efflux transporter, RND family, MFP subunit [Isosphaera pallida
           ATCC 43644]
          Length = 475

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/223 (8%), Positives = 58/223 (26%), Gaps = 7/223 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++ +V  G ++  G  L   +  E  + I   +  +   R  +    +         
Sbjct: 97  GRLERVEVREGDRVDAGQVLAVLDTRELDERIASAQARLDQARADLAELIAGPRV----E 152

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            +     E  + +    L +  +          +S  R     +   +   +   +L   
Sbjct: 153 AIATARAEVEQAEARLELARATTARIADLRKRQASTPREWDETIAAEK---VRVAELAAA 209

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            + L  L++  + +    +    +   +       ER        +   I  +      I
Sbjct: 210 QARLDELIAGTRPERIASQRALVRQLEADLAALNVERDRSILRAPMSGTIAARLADEGTI 269

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                                + ++            ++ + R
Sbjct: 270 LAPQTPVVRLLETTRLRARIGVAESSADDLSVGESQNVVIRDR 312


>gi|156934626|ref|YP_001438542.1| macrolide transporter subunit MacA [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156532880|gb|ABU77706.1| hypothetical protein ESA_02460 [Cronobacter sakazakii ATCC BAA-894]
          Length = 370

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 64/204 (31%), Gaps = 15/204 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ ++L      ++  L     +  +     A  L      L          
Sbjct: 111 LRAQRRQAEAEMKLARVTLSRQQQLARTQAISRQDLDTAATELAVKEAQLGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L+  +   +   I +PIAG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLSTAKTNLDYTRITAPIAGEVTQITTLQGQTVIAAQQAPNILTLA-DLSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  ++     I      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGLKAW--FTVLGDPLT-RYEGRLK----DILPTPEKINDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAK 418
                +    LR    A+V     
Sbjct: 283 -----NPQGVLRLDMTAQVHIQLG 301



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 76/220 (34%), Gaps = 18/220 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVNIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++  +    +  +  +   +R + +        +T   V    + +
Sbjct: 105 EATLMELRAQ--RRQAEAEMKLARVTLSRQQQLARTQAISRQDLDTAATELAVKEAQLGT 162

Query: 160 VYRSLKMKLTRMRSIYLN---------RLDLENKSSLLRALLSSHQKDLTMMKNLFE--- 207
           +   +K     + +   N               + + L+       +    +  L +   
Sbjct: 163 IDAQIKRNQASLSTAKTNLDYTRITAPIAGEVTQITTLQGQTVIAAQQAPNILTLADLST 222

Query: 208 ---KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              K  VS+ D+   +  +      L + +   +  L+ I
Sbjct: 223 MLVKAQVSEADVIHLKPGLKAWFTVLGDPLTRYEGRLKDI 262


>gi|37520444|ref|NP_923821.1| HlyD family multidrug efflux protein [Gloeobacter violaceus PCC
           7421]
 gi|35211438|dbj|BAC88816.1| gll0875 [Gloeobacter violaceus PCC 7421]
          Length = 393

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/307 (9%), Positives = 88/307 (28%), Gaps = 41/307 (13%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            L +       +     ++   S+       R+     + L      L+  + + + D  
Sbjct: 28  LLPRLTRQQELLAAANEAASETSVVALARPTRAAAPAPVRLPGNIQALQETVVNARSDGY 87

Query: 201 MMKNLFEKNAVSQ--------------NDLNQQERIVYKSTLELRENIHEQKNML----- 241
           + + L +     +                +++    + ++  +L++              
Sbjct: 88  LRRRLVDIGDRVRSGQLLAEIDTPELDQRVSELRSTLAQARADLQQQEANLALARTTFER 147

Query: 242 -RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT---ILSPIA 297
            R + E    +  +           +   +   A+  ++   L++    +    + +P +
Sbjct: 148 WRTLREERAVSQQDVDERQSAYRAQMAAVEAQRANLRARQADLDRQVALQNFKQVRAPFS 207

Query: 298 GTIVYNQSFSSSNYAQQS--QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           G +      +          Q  +  V  ++   I   V       ++ G +A V    Y
Sbjct: 208 GIVTARNVDT-GALIAAGSSQNGLFRVAKTERLRIFIDVPQTFAPAIRAGQSARVSVQEY 266

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                + F+  + +    +      L+           T++   + N  L  G  A+V  
Sbjct: 267 P----RPFEGRVTRTAGALDPAARTLR-----------TEVQLDNRNDRLLPGMYAQVEI 311

Query: 416 TAKNTTL 422
             +  + 
Sbjct: 312 AGRRVSP 318



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 21/214 (9%), Positives = 64/214 (29%), Gaps = 6/214 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++  V+ G ++  G  L   +  E    +   + ++   R  +  +++ L      +
Sbjct: 86  GYLRRRLVDIGDRVRSGQLLAEIDTPELDQRVSELRSTLAQARADLQQQEANLALARTTF 145

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +      E R     D   +  +  +++      +   + +  L   ++    ++ L+N 
Sbjct: 146 ERWRTLREERAVSQQDVDERQSAYRAQM------AAVEAQRANLRARQADLDRQVALQNF 199

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             +                 L    +         +    +  +++ +         +  
Sbjct: 200 KQVRAPFSGIVTARNVDTGALIAAGSSQNGLFRVAKTERLRIFIDVPQTFAPAIRAGQSA 259

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                E    F   +   +  L+   RT   E+ 
Sbjct: 260 RVSVQEYPRPFEGRVTRTAGALDPAARTLRTEVQ 293


>gi|293389954|ref|ZP_06634288.1| AcrA protein [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290950488|gb|EFE00607.1| AcrA protein [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 326

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 8/195 (4%)

Query: 23  LSIIGIIGLITWSI----LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
             IIG +G   W         +    + +G +  E   ++I + + G +++  V+ G ++
Sbjct: 10  FIIIGAVGFAIWKNGQLQANELNGIAAVNGRL--ELKRLDIATLYPGRVEEILVQEGDEV 67

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +  PL       +   I   +   K     +    S +D    + +V +    + ++  
Sbjct: 68  KRNQPLARLSSSISQAQISAAQAQKKRAEESVARALSEIDARQQQVNVTKLELNNAQKLR 127

Query: 139 LDFL--GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            D L            +   +++V  +   K+    ++   +  LE   S    +L    
Sbjct: 128 RDNLISSSELERRQSAYKASLAAVNTTQAAKVEAQAAVAQAQAQLEQAQSQNTDMLIKAP 187

Query: 197 KDLTMMKNLFEKNAV 211
           KD  +   + E   V
Sbjct: 188 KDGRVEYQIAEVGNV 202


>gi|315498458|ref|YP_004087262.1| secretion protein hlyd family protein [Asticcacaulis excentricus CB
           48]
 gi|315416470|gb|ADU13111.1| secretion protein HlyD family protein [Asticcacaulis excentricus CB
           48]
          Length = 311

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 57/186 (30%), Gaps = 9/186 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI- 110
            E   V + +P SG + +  V++G+ +  G PL T +  +    +   +   +       
Sbjct: 29  VEAQSVAVAAPQSGWLTQVYVDDGATVSAGEPLFTLDATQQQQALSGAESQRRAAEATAT 88

Query: 111 -----DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                  E      L  +         +R E+            S+     + +  ++ +
Sbjct: 89  DLSKGAREADIAPLLKERDQARASLDLARSEEARYAKLAPQGYVSQAKLDQLRATRQAAE 148

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN--LFEKNAVSQNDLNQQERIV 223
             +  +    + R        L  A   +        +   + ++ AV +  LN Q    
Sbjct: 149 ANVAAIERSIVARRQAARTDQLAAAQAQAQAAGAEASQAQWMLDERAV-KARLNGQVERR 207

Query: 224 YKSTLE 229
            +   E
Sbjct: 208 LREAGE 213



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/217 (10%), Positives = 69/217 (31%), Gaps = 9/217 (4%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q+    G   S    +F    +   ++L    ++ R+      DL        A ++   
Sbjct: 46  QVYVDDGATVSAGEPLFTLDATQQQQALSGAESQRRAAEATATDL--SKGAREADIAPLL 103

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           K+    +   +     +    +     Y S  +L +    ++    ++  +         
Sbjct: 104 KERDQARASLDLARSEEARYAKLAPQGYVSQAKLDQLRATRQAAEANVAAIERSIVARRQ 163

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
               +        Q       ++ +  +   +++ + + + G +   +   +  +     
Sbjct: 164 AARTDQLAA---AQAQAQAAGAEASQAQWMLDERAVKARLNGQVER-RLREAGEFVAAGT 219

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           P++ + P  +  ++R  V    +  ++ G   T+R  
Sbjct: 220 PVLSVYPGGRE-FVRFYVPQGDLAKIRIGQ--TIRLS 253


>gi|269214781|ref|ZP_05987140.2| macrolide-specific efflux protein MacA [Neisseria lactamica ATCC
           23970]
 gi|269209016|gb|EEZ75471.1| macrolide-specific efflux protein MacA [Neisseria lactamica ATCC
           23970]
          Length = 426

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 2/132 (1%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +VS++GEI    N+V + +  SG IKK  V+ G Q+ +G  +        T+ ++ +K  
Sbjct: 81  TVSATGEISPS-NLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTEKSK 139

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGISSVY 161
           ++  +  + + + AL     KY      ++       D    +     +K     + ++ 
Sbjct: 140 LETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELKALI 199

Query: 162 RSLKMKLTRMRS 173
           R  K+ +    S
Sbjct: 200 RQSKISINTAES 211



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 79/262 (30%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +        +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 95  SVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 146

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        +    E      + L     ++ + +         +
Sbjct: 147 LVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAELKALIRQSKISI 206

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    I+  +   +   + ++    
Sbjct: 207 NTAESELGYTRITATMDGTVVAIPV-EEGQTVNAAQSAPTIIQLANLDMMLNKMQIAEGD 265

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 266 ITKVKAGQ--DISFMILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 322

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 323 SFVP-----NPDGKLATGMTTQ 339


>gi|225574832|ref|ZP_03783442.1| hypothetical protein RUMHYD_02909 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037955|gb|EEG48201.1| hypothetical protein RUMHYD_02909 [Blautia hydrogenotrophica DSM
           10507]
          Length = 557

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 82/271 (30%), Gaps = 16/271 (5%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E    ++  N     E   ++  +       K  +  +   +   S++  +L        
Sbjct: 199 EAQMEEYSENVAAAKEALTKAEAKVQECLKAKREAERAYKKDPDNSALSSALDEATYDYE 258

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                + D ++    ++A + +   D T M    E       D +  E  + +++ +L E
Sbjct: 259 DAVAAKTDAQSNLQEVKAQIPTMDTDSTAMTGGSETGTTVMVDTSDLEVAIEQASSDLAE 318

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              E         E    A  E      +I+ +L + +   A E+           +K I
Sbjct: 319 LQSELATKKAE-AEADPNALTEEEKEKMKITNNLAEMETKTAKEL-------VIEGKKGI 370

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +   G I  ++         Q   +  I        +   ++      + +G  A +  
Sbjct: 371 QAEFNGVISDSKVV-EGATTTQGMEMFTIKSLDN-VSVDLNISKYDYDKLDEGQKAVITI 428

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             Y        K  + KI  I +  +    T
Sbjct: 429 GDYTY------KGTVTKISRIATPNEKGAAT 453


>gi|146399951|gb|ABQ28693.1| sla2 [Neosartorya fischeri]
          Length = 1018

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 5/224 (2%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++ Q   L      +T   +   +    N R   + ++  L   + +   LE+    
Sbjct: 325 EQQRLAQEQLLREQYQTQTQGRLAELERENLNARAQYERDQLMLQQYDRRVKDLEEQMAQ 384

Query: 134 REEQLLDFLGKYHSTCSKVFNYGI---SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               L +          +     +    S Y +L    +++R  +L+ L       L  A
Sbjct: 385 LTTNL-NMQNASKDEQIRALQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTTKSLKLKAA 443

Query: 191 LL-SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               + ++   + + L  KN    + + +++R ++        N  E + + R +    +
Sbjct: 444 SAQEAIERREKLERELKTKNLELADMIRERDRALHDRDRLTGTNKEELEKLKRELRLAIE 503

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            A     +   EIS  L +  R  AD    L    +  E+ +  
Sbjct: 504 RAENAERSKGTEISTLLSKYNREMADLEESLRNKTRALEEISSR 547



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 77/210 (36%), Gaps = 7/210 (3%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           FE+ +       +    + LR    T+         + ++  +A   R++ +L    +  
Sbjct: 316 FEEQQRLQAEQQRLAQEQLLREQYQTQTQGRLAELERENLNARAQYERDQLMLQQYDRRV 375

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD----LTMM 202
               +      +++      K  ++R++        +K   L  L S  +++    L   
Sbjct: 376 KDLEEQMAQLTTNLNMQNASKDEQIRALQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTT 435

Query: 203 KNLFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           K+L  K A +Q  + +    ER +    LEL + I E+   L   + L      E     
Sbjct: 436 KSLKLKAASAQEAIERREKLERELKTKNLELADMIRERDRALHDRDRLTGTNKEELEKLK 495

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +E+   +E+ +     + ++++ L     +
Sbjct: 496 RELRLAIERAENAERSKGTEISTLLSKYNR 525


>gi|262393827|ref|YP_003285681.1| multidrug resistance efflux pump [Vibrio sp. Ex25]
 gi|262337421|gb|ACY51216.1| multidrug resistance efflux pump [Vibrio sp. Ex25]
          Length = 354

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 73/200 (36%), Gaps = 10/200 (5%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M  + K  H   ++ + +L I+  + +I      P+       G ++      ++    S
Sbjct: 1   MTADQKFKHW--MRTLIVLFIVLFLYIIIADRHAPLTTEGRVQGYVV------QVAPEVS 52

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    +EN   + +G  L T +D +    ++  ++S+++      T  S  +      
Sbjct: 53  GKVTDVLIENNQSVQKGDVLFTIDDRKYKIALEQAELSLQSAYEKEATLYSQREAALANI 112

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +  F++   +    L    S    +    + + +   ++    +++   N   +E +
Sbjct: 113 ARAQATFDNAHREYTRLLT--LSKQKVISQSTLDNAFAQNQVSRAALKAERQNLKVIEAQ 170

Query: 185 SSLLRALLSSHQKDLTMMKN 204
             + +   ++ +     ++ 
Sbjct: 171 LGVQKGQSTAVRIAKNGIEK 190



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 65/210 (30%), Gaps = 21/210 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +   +     SL+    +  ++Y  R       +  +A   +  ++ T +  L ++  
Sbjct: 78  RKYKIALEQAELSLQSAYEKEATLYSQREAALANIARAQATFDNAHREYTRLLTLSKQKV 137

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +SQ+ L+        S   L+      K +   +     ++                   
Sbjct: 138 ISQSTLDNAFAQNQVSRAALKAERQNLKVIEAQLGVQKGQSTAVRI-------------- 183

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  + +   +       +L+P  G +   Q       A  + PL+  VP     ++
Sbjct: 184 -----AKNGIEKAQLDLANTAVLAPSDGVVTNLQL-EVGTMANTNMPLLTFVPTGS-LWV 236

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            A    K + +V K + A V F        
Sbjct: 237 AADFREKSVANVDKTFHALVTFDANPGSVY 266


>gi|83943995|ref|ZP_00956452.1| hypothetical protein EE36_10130 [Sulfitobacter sp. EE-36]
 gi|83845242|gb|EAP83122.1| hypothetical protein EE36_10130 [Sulfitobacter sp. EE-36]
          Length = 393

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 76/200 (38%), Gaps = 10/200 (5%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I   V++ G  +   +V E++    G++K+     G  +  G PL   +D      +  
Sbjct: 49  EIPRIVTTPGRAVAFQDV-EVRPRVGGVVKEILYTPGQLLEVGDPLFRIDDASYLAAVAT 107

Query: 99  KKVSIKNLRCHIDTEKSALDFLN--NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            + ++     ++  +++A D     +     E   E+    L +      +  + V    
Sbjct: 108 ARANLATAEANLPVKQAAYDRAEQLSGRGYTEAEVEAARASLAEAKATLDANKAAVEYAE 167

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLD---LENKSSLLRALLSSHQKDLTMM----KNLFEKN 209
               + ++   +     +    +       ++  L ++++S    + MM    + L  ++
Sbjct: 168 TELSWTTMTSPIAGRADVSTVSVGDLVTAGQADALTSIVTSDPIYVDMMEASARILSVRS 227

Query: 210 AVSQNDLNQQERIVYKSTLE 229
           A+++ DL Q + +    TLE
Sbjct: 228 AIAEGDLQQNDTLQATLTLE 247



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 60/221 (27%), Gaps = 36/221 (16%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-----SRDLEQNQRTFADEMSK 279
            +    R N+   +  L      YD A         E         L + + T     + 
Sbjct: 103 AAVATARANLATAEANLPVKQAAYDRAEQLSGRGYTEAEVEAARASLAEAKATLDANKAA 162

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHS----KLTYIRAK 333
           +   E      T+ SPIAG      + S  +     Q   L  IV        +    A+
Sbjct: 163 VEYAETELSWTTMTSPIAGRA-DVSTVSVGDLVTAGQADALTSIVTSDPIYVDMMEASAR 221

Query: 334 VTPKQIQHVKKG-------YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
           +       + +G         AT+          +    ++   + + +           
Sbjct: 222 ILSV-RSAIAEGDLQQNDTLQATLTLE--NGDIYRGTGQLVTPGNNVSTSTGT------- 271

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII 427
             V ++ T   F + +  +  G            T+   ++
Sbjct: 272 --VTIRFT---FDNPDHIILPGMFVRGEIVLG--TMQAYLV 305


>gi|258593275|emb|CBE69614.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 415

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 101/295 (34%), Gaps = 45/295 (15%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             E +  + L     +N+    +  +        K + + K    R  Q+   +     +
Sbjct: 56  PDEASIGVRLTPEERENIGLRTEVAQLRPVEDVRKLNGIVKPHPDRVAQVTSRVPGIVLS 115

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
                   +      L +K   +  + L  +  ENK +L +        DL  ++ L E+
Sbjct: 116 VHASLGAWVRRGDDLLDIKGVELERLELGLIQAENKLALTKV-------DLERVRLLVER 168

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             V++ +L + E        + REN++E +++ R +N         F    KE    + +
Sbjct: 169 EIVARKELLKLE-------NQHRENLNEIESLTRQLN---------FLGLPKEAIARIRE 212

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            Q               T     + +PI GTIV           + +  LM+I+  + + 
Sbjct: 213 KQ---------------TVATLHLPAPIGGTIVERNVV-IGQAIEPNVVLMRII-DTSIM 255

Query: 329 YIRAKVTPKQI-QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
            +  +   + I   ++ G    V    Y D     F+  I  I P ++     + 
Sbjct: 256 LVEGE-AFEDILPVLQLGQKVRVVIAAYPDEI---FEGKISFISPTVNPTKRTIS 306


>gi|281424588|ref|ZP_06255501.1| efflux transporter, RND family, MFP subunit [Prevotella oris F0302]
 gi|281401259|gb|EFB32090.1| efflux transporter, RND family, MFP subunit [Prevotella oris F0302]
          Length = 359

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 59/185 (31%), Gaps = 3/185 (1%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W     +     ++   +     +E+++   GI+++  V  G Q+  G PL     +   
Sbjct: 37  WVTNTQVSKDYVAN---IESRKNIEVRAQQEGILQQVYVTEGQQVRAGQPLFRISIVGAQ 93

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +   K   +  R  +    +         +  + A       L D+          + 
Sbjct: 94  QNVARAKAEAEQARIELQNTTTLTRGQIVSPNAQKMAKAKLNAALADYKLAQIQARLCLI 153

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +   + V  SL  K+  +         L + SSL      S  + +   ++  E+N +  
Sbjct: 154 SAPFTGVIGSLPKKIGSLVQGGDLLTTLSDNSSLNVYFNISEPEYIDYQQHSAERNKLPL 213

Query: 214 NDLNQ 218
             +  
Sbjct: 214 TLILA 218


>gi|238896747|ref|YP_002921492.1| p-hydroxybenzoic acid efflux subunit AaeA [Klebsiella pneumoniae
           NTUH-K2044]
 gi|329997572|ref|ZP_08302844.1| efflux transporter, RND family, MFP subunit [Klebsiella sp. MS
           92-3]
 gi|238549074|dbj|BAH65425.1| putative membrane located multidrug resistance protein [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|328538991|gb|EGF65041.1| efflux transporter, RND family, MFP subunit [Klebsiella sp. MS
           92-3]
          Length = 310

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 72/222 (32%), Gaps = 21/222 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q    +            +    E++      N+L  +A       + + +  L+  
Sbjct: 77  VIDQPRYQKALAQAEADVAYYQTLAQEKRVEAGRRNKLGVQAMSR--EEIDQANNVLQTV 134

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   A  ++   +     E+  I +P  G +     ++   +  +    + +V  +   Y
Sbjct: 135 EHQLAKAVASRDLARLDLERTVIRAPADGWVTNLNVYT-GEFITRGSTAVALVKEN-TFY 192

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A +   +++ V+ GY A +        +    K  ++ I   ++   ++  ++    V
Sbjct: 193 VMAYLEETKLEGVRPGYRAEI--TPLGSSKT--IKGTVDSIAAGVTNASSSSDSKGMASV 248

Query: 390 -----------ILKITDLAFSDNNIELRN-GFPAEVLFTAKN 419
                       + +  +        L   G  A V+ T + 
Sbjct: 249 DSNLEWVRLAQRVPV-RIRLDHQQGNLWPSGTTATVVITGQE 289



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 50/154 (32%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L RN   +   + L+ +  +     W        +   + +     ++V I    SG+
Sbjct: 2   KTLTRNILRTAITVILVILAFVAIFRAWVYYT----ASPWTRDARFSADIVAIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V++   + +   L   +       +   +  +   +  +  EK       NK  V
Sbjct: 58  ISQVNVKDNQLVKKDQVLFVIDQPRYQKALAQAEADVAYYQT-LAQEKRVEAGRRNKLGV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H     V +  ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVEHQLAKAVASRDLARL 150


>gi|296123003|ref|YP_003630781.1| hypothetical protein Plim_2759 [Planctomyces limnophilus DSM 3776]
 gi|296015343|gb|ADG68582.1| hypothetical protein Plim_2759 [Planctomyces limnophilus DSM 3776]
          Length = 681

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 63/170 (37%), Gaps = 3/170 (1%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
             ++R+ L ++ G  G++    L+P E+ ++  G +        + +  +G +++  V  
Sbjct: 381 RQVRRVMLFALFG--GVVASLFLIPGELQMTGQGAVWP-RERKHVFALHAGGVEQIHVNQ 437

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           GS +  G  L+T  + E        +  I  L   I+  +SA   L++            
Sbjct: 438 GSIVKTGDLLVTLHNPEMELESTRLQGEILTLEKQIEATRSARVQLSSGNSDQAAKAAEL 497

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             Q L F  +  S   ++     +     ++  +      +  +  L  +
Sbjct: 498 SAQELGFEQQLQSRREELSLVKQAMSELQIRSPMDGEIMTWDPQQTLAGR 547



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 73/229 (31%), Gaps = 18/229 (7%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E    +   E+   + +Q    R         N + A    E+S      ++      
Sbjct: 454 EMELESTRLQGEIL-TLEKQIEATRSARVQLSSGNSDQAAKAAELSAQELGFEQQLQSRR 512

Query: 278 SKLTILEKTREQKTILSPIAGTIV--YNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            +L+++++   +  I SP+ G I+    Q   +    ++ Q L+ +        +  +VT
Sbjct: 513 EELSLVKQAMSELQIRSPMDGEIMTWDPQQTLAGRPVERGQILLDLGDTHGEWVVDVRVT 572

Query: 336 PKQIQHV------KKGY--TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
            + + H+        G       + P    +  +  +     ++ I    + +   Q Y 
Sbjct: 573 DQSMGHILSAYVQSPGQGNRPQEKLPAEFVLTTRPEETHTAYVESISESVERDEMGQLYL 632

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITDNWPK 436
            ++L       +     LR G  A              +   + D   +
Sbjct: 633 RLVLGFDRQNVAG----LRPGATAVPRIHCG-RAPLGYVW--LHDLIDR 674


>gi|296216334|ref|XP_002754537.1| PREDICTED: pleckstrin homology-like domain family B member 1
           isoform 1 [Callithrix jacchus]
          Length = 1408

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 79/229 (34%), Gaps = 24/229 (10%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++ +V     + +    L     E      L +   +  R  +  E+ A+D L  + 
Sbjct: 724 GRVEQLKVR----VKELEQQLQESAREAEMERALLQGEREAERSLLQKEQKAVDQLQEEL 779

Query: 125 DVLEKAFE-SREEQLLDFLGKYHSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNR 178
             LE   +  R+++  +         ++          + +   S++ +L          
Sbjct: 780 VALETGIQKERDKERAELAAGRRHLEARQALYAELQTQLDNCPESVREQLQEQLRREAEA 839

Query: 179 LDLENKS-SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           L+ E K    L       +  +   + L  +  +             +S  EL  +I ++
Sbjct: 840 LETETKLFEDLEFQQLERESRVEEERELAGQGLL-------------RSKAELLRSIAKR 886

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           K  L  ++    +   +     + ++RD   + +    E  KLT+LE+ 
Sbjct: 887 KERLAVLDSQAGQIRAQAVQESERLARDKNASLQLLQKEKEKLTVLERR 935



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 57/192 (29%), Gaps = 19/192 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +S+ +       + E    S EE L +      ST  +  +   + +   +         
Sbjct: 662 RSSEEPGVATQRLWESMERSDEENLKEECSSTESTQQEHEDAPSAKLQGEVLALEEERAQ 721

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-------------EKNAVSQ--NDLNQ 218
           +      L+ +   L   L    ++  M + L              E+ AV Q   +L  
Sbjct: 722 VLGRVEQLKVRVKELEQQLQESAREAEMERALLQGEREAERSLLQKEQKAVDQLQEELVA 781

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFA 274
            E  + K   + R  +   +  L     LY E   +  N      +++   L +      
Sbjct: 782 LETGIQKERDKERAELAAGRRHLEARQALYAELQTQLDNCPESVREQLQEQLRREAEALE 841

Query: 275 DEMSKLTILEKT 286
            E      LE  
Sbjct: 842 TETKLFEDLEFQ 853


>gi|270296741|ref|ZP_06202940.1| ABC transporter permease [Bacteroides sp. D20]
 gi|270272728|gb|EFA18591.1| ABC transporter permease [Bacteroides sp. D20]
          Length = 416

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 104/314 (33%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE-QLLDFLGKYHSTCSK 151
            D I + +V       ++D E      L  K +  E     R   +    L +  +    
Sbjct: 45  QDNIQIAEVKNGKFMEYVDVEGVIQPILTIKVNAREAGSVERIIGEEGSLLQQGDTILVM 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + S+         ++ +     +++E KS  L+        DL  ++  F     
Sbjct: 105 ENPDLLRSIEDQRDDWEKQLITYREKEIEMEQKSLNLQQQALQTDYDLNRLRKSFA---- 160

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
                  +E        + +  + E +   +  N      +L   + +  I +DL +N R
Sbjct: 161 -----LDKEEYRMGIKSKAQLEVSEDEYNYKVKNAHLQRESLRHDSAVTVIRKDLIRNDR 215

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  K     +      + +P+AG + + +  +        + + +I        + 
Sbjct: 216 ER--ERKKYERACERLGNLVVKAPVAGQLSFVKV-TPGQQVASGESIAEIK-VLDQYKVH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPIISQQ-DNNLQTQE 385
             ++   I  +  G  AT+ +    Y     K    + ++   +D + +    +N++  +
Sbjct: 272 TSLSEYYIDRIITGLPATINYQGRKYPLRITKVVPEVKDRTFDVDLVFTGDMPDNVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEEA 345


>gi|212633274|ref|YP_002309799.1| HlyD family secretion protein [Shewanella piezotolerans WP3]
 gi|212554758|gb|ACJ27212.1| HlyD family secretion protein [Shewanella piezotolerans WP3]
          Length = 372

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 60/155 (38%), Gaps = 20/155 (12%)

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           +DL+ ++  +   ++    L  T  ++ I +P AG +   ++ +   Y Q      +IV 
Sbjct: 138 QDLDNSESKYLALVADSESLSATIGRREIKAPFAGLV-GIRNVNLGEYLQTGT---EIVR 193

Query: 324 HSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                   IR  +   Q+  + KG    V    Y     + F+ +I  I+P +       
Sbjct: 194 LEDISTMKIRFTIPQTQLPRIAKGQPVHVYVDAYP---TEPFEGVISAIEPAV------- 243

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
               +Y+  L        + + +LR+G  A+V   
Sbjct: 244 ----FYQSGLIQVQAQIPNTDSKLRSGMFAKVDIQ 274



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 47/132 (35%), Gaps = 5/132 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +     V  I +  +G++   + ENGS +  G  L+  +       +  K+V +  
Sbjct: 60  AIGFVEPNQGV-TIANELAGVVSAIKFENGSSVEAGQMLIELDSKVEKANLKSKQVQLPA 118

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                  +   L  L  +  V ++  ++ E + L  +    S  + +    I + +  L 
Sbjct: 119 ----ASEDFKRLTKLYKQNSVSKQDLDNSESKYLALVADSESLSATIGRREIKAPFAGLV 174

Query: 166 MKLTRMRSIYLN 177
                    YL 
Sbjct: 175 GIRNVNLGEYLQ 186


>gi|153836037|ref|ZP_01988704.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AQ3810]
 gi|149750791|gb|EDM61536.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AQ3810]
          Length = 376

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 75/232 (32%), Gaps = 23/232 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   ++ +   +K        +  +  + E      +A     Q++ +  +  F++ A +
Sbjct: 99  FEAEVARLEAKVKEASQGALGLESDLKEAEAAVLKAQADRDKAQREFSRYQRGFDRGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + DL+ + +    +   L   I +Q+     ++      N + A  L E           
Sbjct: 159 EQDLDTRRQAYKAAEAMLDVAILQQEQAQIALDSEIGGENTQVAQLLAE----------- 207

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
                  L   E   EQ  + +P  G +                 P M  V    +TY  
Sbjct: 208 -------LRKAEFNLEQTIVRAPTDGYVTQLALRPGVMAVPLPLAPAMTFVHTEDITYTA 260

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           A      +Q +K G+ A   F     I  K F+  +  + P I +     + 
Sbjct: 261 A-FRQNSLQRLKPGFEAEFMFRA---IPGKVFRGEVIDVIPAIGESQIQARG 308



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 49/147 (33%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK-----NLRCHIDTEKSALDF 119
           G + +  V+    +  G  L   + +     +   +  +K      L    D +++    
Sbjct: 72  GRVVEVPVQANQPLKTGDILFKIDPVPFEAEVARLEAKVKEASQGALGLESDLKEAEAAV 131

Query: 120 LNNKYDVLEKAFE-SREEQLLD---FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           L  + D  +   E SR ++  D   F  +   T  + +    + +  ++  +     ++ 
Sbjct: 132 LKAQADRDKAQREFSRYQRGFDRGAFTEQDLDTRRQAYKAAEAMLDVAILQQEQAQIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                   + + L A L   + +L   
Sbjct: 192 SEIGGENTQVAQLLAELRKAEFNLEQT 218


>gi|170738774|ref|YP_001767429.1| RND family efflux transporter MFP subunit [Methylobacterium sp.
           4-46]
 gi|168193048|gb|ACA14995.1| efflux transporter, RND family, MFP subunit [Methylobacterium sp.
           4-46]
          Length = 408

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/205 (11%), Positives = 61/205 (29%), Gaps = 8/205 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I      +G ++  D ++         I +  VE G ++ +G  L           +  
Sbjct: 54  EIVERTVVTGTLVPRDEIMVSPEIEGCRITELLVEEGDRVARGAVLARLSREMIDTQLAQ 113

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES-----REEQLLDFLGKYHSTCSKVF 153
              +I      ++  +S +            A E      R     +   +  ++ ++  
Sbjct: 114 NAAAIARAEAAVEQARSTIVQAEAAQVEAALALERTRTLIRTGNATEVQMEQRTSAARSA 173

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +++    L +    +      R +L+ K +          +   + +      A + 
Sbjct: 174 EGRLAAARNGLSIAEAELLQARAQRRELDLKLARTEI---RAPEGGIVSRRTARVGATAS 230

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
                  R++ +  +EL   + E  
Sbjct: 231 ATAEPLFRLIARGEIELEGEVTETG 255


>gi|119592245|gb|EAW71839.1| myosin, heavy polypeptide 14, isoform CRA_b [Homo sapiens]
          Length = 1625

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 73/212 (34%), Gaps = 11/212 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            E  E  + +  ++   + LR  +  ++  L     + +    A     + L +       
Sbjct: 1224 ESSELQEQMVEQQQRAEELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAALAE 1283

Query: 148  TCSKVFNYGIS-----SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                + +  ++        R L  +L  +R    + LD  N    LR+     Q+   + 
Sbjct: 1284 AQEDLESERVARTKAEKQRRDLGEELEALRGELEDTLDSTNAQQELRS--KREQEVTELK 1341

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            K L E+  + +  + +  +   ++  EL E + + +         +++  L     + E+
Sbjct: 1342 KTLEEETRIHEAAVQELRQRHGQALGELAEQLEQARRGKG----AWEKTRLALEAEVSEL 1397

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              +L   Q    +   +   LE   ++    +
Sbjct: 1398 RAELSSLQTARQEGEQRRRRLELQLQEVQGRA 1429



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 71/209 (33%), Gaps = 15/209 (7%)

Query: 100  KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL------LDFLGKYHSTCSKVF 153
            +   ++L   ++  +  L+   +  +  ++    RE+++      L+   + H    +  
Sbjct: 1299 EKQRRDLGEELEALRGELEDTLDSTNAQQELRSKREQEVTELKKTLEEETRIHEAAVQEL 1358

Query: 154  NYGISSVYRSLKMKLTRMRSI----YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                      L  +L + R         RL LE + S LRA LSS Q      +    + 
Sbjct: 1359 RQRHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAELSSLQTARQEGEQRRRRL 1418

Query: 210  AVSQNDLNQQ----ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +   ++  +    ER   ++  +L+    E +N+   +NE   +  +  +  L      
Sbjct: 1419 ELQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGALNEAESKT-IRLSKELSSTEAQ 1477

Query: 266  LEQNQRTFADEMSKLTILEKTREQKTILS 294
            L   Q    +E      L          +
Sbjct: 1478 LHDAQELLQEETRAKLALGSRVRAMEAEA 1506



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 7/203 (3%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +      + +   L+  N+K     K  E R  +      +       
Sbjct: 1126 ARQKLQLEKVTTEAKMKKFEEDLLLLEDQNSKLSKERKLLEDRLAEFSSQAAEEEEKVKS 1185

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +    +     ++     R+R     R +LE     L    S  Q+ +   +   E+   
Sbjct: 1186 LNKLRLK-YEATIADMEDRLRKEEKGRQELEKLKRRLDGESSELQEQMVEQQQRAEE--- 1241

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE--ISRDLEQN 269
             +  L ++E  +  +     +    +  +L+ + E          +   E       E+ 
Sbjct: 1242 LRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLESERVARTKAEKQ 1301

Query: 270  QRTFADEMSKLTI-LEKTREQKT 291
            +R   +E+  L   LE T +   
Sbjct: 1302 RRDLGEELEALRGELEDTLDSTN 1324


>gi|116695058|ref|YP_840634.1| cation/multidrug efflux system, mebrane-fusion component [Ralstonia
           eutropha H16]
 gi|113529557|emb|CAJ95904.1| Cation/multidrug efflux system, mebrane-fusion component [Ralstonia
           eutropha H16]
          Length = 413

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 4/128 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED---IETTDLIDLKKVSI 103
           SG +   + V EI+    G I       G+ + +G PL T +           D    + 
Sbjct: 63  SGRVEAVERV-EIRPRVGGTIDAVHFREGALVKKGDPLFTIDPRPYAAEVARADAALGAA 121

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +    H  +E++    L +   + ++ F+ R     +      +  +++    ++  Y  
Sbjct: 122 QVRAAHAQSEQTRAQRLLDDNAISKREFDERINAARETSANVRAAQAQLETARLNLAYTR 181

Query: 164 LKMKLTRM 171
           +   +   
Sbjct: 182 ITAPVAGR 189



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 9/85 (10%), Positives = 25/85 (29%), Gaps = 2/85 (2%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +      ++       L D+  +    + + I+    +         ++L          
Sbjct: 122 QVRAAHAQSEQTRAQRLLDDNAISKREFDERINAA-RETSANVRAAQAQLETARLNLAYT 180

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQS 315
            I +P+AG +   +  +  N     
Sbjct: 181 RITAPVAGRVSRAEI-TVGNLVAAG 204


>gi|82545848|ref|YP_409795.1| hypothetical protein SBO_3482 [Shigella boydii Sb227]
 gi|193061868|ref|ZP_03042965.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E22]
 gi|194426992|ref|ZP_03059544.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B171]
 gi|218556036|ref|YP_002388949.1| putative HlyD family secretion protein [Escherichia coli IAI1]
 gi|260846277|ref|YP_003224055.1| putative HlyD family secretion protein [Escherichia coli O103:H2
           str. 12009]
 gi|260870211|ref|YP_003236613.1| putative HlyD family secretion protein [Escherichia coli O111:H-
           str. 11128]
 gi|300822709|ref|ZP_07102846.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 119-7]
 gi|300926809|ref|ZP_07142577.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 182-1]
 gi|301329821|ref|ZP_07222553.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 78-1]
 gi|331670311|ref|ZP_08371150.1| putative membrane protein [Escherichia coli TA271]
 gi|331679554|ref|ZP_08380224.1| putative membrane protein [Escherichia coli H591]
 gi|81247259|gb|ABB67967.1| putative membrane protein [Shigella boydii Sb227]
 gi|192932658|gb|EDV85255.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli E22]
 gi|194414953|gb|EDX31223.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Escherichia coli B171]
 gi|218362804|emb|CAR00430.1| putative HlyD family secretion protein [Escherichia coli IAI1]
 gi|257761424|dbj|BAI32921.1| predicted HlyD family secretion protein [Escherichia coli O103:H2
           str. 12009]
 gi|257766567|dbj|BAI38062.1| predicted HlyD family secretion protein [Escherichia coli O111:H-
           str. 11128]
 gi|300417159|gb|EFK00470.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 182-1]
 gi|300524709|gb|EFK45778.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 119-7]
 gi|300844119|gb|EFK71879.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 78-1]
 gi|320175684|gb|EFW50772.1| putative membrane protein [Shigella dysenteriae CDC 74-1112]
 gi|320187749|gb|EFW62424.1| Putative membrane protein [Shigella flexneri CDC 796-83]
 gi|323178985|gb|EFZ64559.1| hlyD family secretion family protein [Escherichia coli 1180]
 gi|323944468|gb|EGB40542.1| HlyD family protein secretion protein [Escherichia coli H120]
 gi|324116503|gb|EGC10421.1| HlyD family protein secretion protein [Escherichia coli E1167]
 gi|331062373|gb|EGI34293.1| putative membrane protein [Escherichia coli TA271]
 gi|331072726|gb|EGI44051.1| putative membrane protein [Escherichia coli H591]
 gi|332090322|gb|EGI95420.1| hlyD family secretion family protein [Shigella boydii 3594-74]
          Length = 355

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHMRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|94310651|ref|YP_583861.1| secretion protein HlyD [Cupriavidus metallidurans CH34]
 gi|93354503|gb|ABF08592.1| multidrug resistance efflux pump [Cupriavidus metallidurans CH34]
          Length = 378

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 58/191 (30%), Gaps = 17/191 (8%)

Query: 18  KRMTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
            +     +I I+  + W +L     P          ++       + S  SG + +  V 
Sbjct: 27  GKGVRWVVIAIVLSLVWYLLADRFTPYTQQARVQAFVIP------VASEVSGRVTQVPVH 80

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE----- 128
           N   +  GT L   +  +    +D  +   ++ R  I    + +D         +     
Sbjct: 81  NNQNVEVGTVLFEVDPQQYRIALDRARADFESTRRQIGANTAGIDSARESLRAAQANELK 140

Query: 129 --KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             +  E  E    +  G       +V     +     +      +      +   E  ++
Sbjct: 141 ARQDSERLERLYREDPGTVSVRRLEVARATHTQAVSQVGAARAEVERAKEQQGGSEENNA 200

Query: 187 LLRALLSSHQK 197
            LR+  ++ +K
Sbjct: 201 KLRSAAAAVEK 211


>gi|302849266|ref|XP_002956163.1| hypothetical protein VOLCADRAFT_97128 [Volvox carteri f. nagariensis]
 gi|300258466|gb|EFJ42702.1| hypothetical protein VOLCADRAFT_97128 [Volvox carteri f. nagariensis]
          Length = 2003

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 80/250 (32%), Gaps = 25/250 (10%)

Query: 50   ILNEDNVVEI-KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
            +  E+    + ++  SG+++   V  G  +     L   ++ E   L ++ +++ +N R 
Sbjct: 1292 VKVEEYKKAVYEAYASGLVRD--VVYGGAVRVAANLALLDNAEARYLAEVDRINAENARL 1349

Query: 109  H----------IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                          E++    +    +  E A    E        ++ +  +++     +
Sbjct: 1350 RQLHAEEVEEKRAKEEAHGQAVRRWQEAREVALRQHEADRERARAEHEANINRLKAEWRA 1409

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---------NLFEKN 209
               ++L++   R+         L  +             +L   +          L E  
Sbjct: 1410 KTQQTLELNDARLTEAESMHEALVEQVKETNKRHKEEHTELLRQRKEVEATNLSRLAEAK 1469

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            AV +  L   E     +   +R  + E + +   + E Y+E   +      E+   L   
Sbjct: 1470 AVHKVRL---ESRSADNERLIRNAMEEHQALCVRLQEEYEEGKQQAEVDHSELCTFLRAA 1526

Query: 270  QRTFADEMSK 279
                 +E  +
Sbjct: 1527 NEQLTEEARR 1536


>gi|260881188|ref|ZP_05403819.2| putative secretion protein HlyD [Mitsuokella multacida DSM 20544]
 gi|260849745|gb|EEX69752.1| putative secretion protein HlyD [Mitsuokella multacida DSM 20544]
          Length = 430

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 57/193 (29%), Gaps = 16/193 (8%)

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           ++ N +   +  + E+  Y+    L       ++ L  + + Y  +   F     ++   
Sbjct: 138 YDANYIKARNDLELEQSKYERNQYLYSIGAISQDTLDSVKQEYLASKAAFDVLADQVEGG 197

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT----ILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
              +  + A    K         ++     + +P AG I   ++  +         +  +
Sbjct: 198 SAASVESKAYTAEKSAHATDALRRQREDMYLRAPRAGVI-GYRNVEAGEIVSAGTKVFSL 256

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V  +    +   +       +K G    V            +   I  + P +       
Sbjct: 257 V-DNSHLNVDCTLAESDAAILKPGMEVEVTIDALGA----DYPGKIVYVSPAMDDTSKT- 310

Query: 382 QTQEYYEVILKIT 394
                Y+V +++ 
Sbjct: 311 -----YQVRIELE 318


>gi|220922516|ref|YP_002497818.1| multidrug resistance efflux pump-like protein [Methylobacterium
           nodulans ORS 2060]
 gi|219947123|gb|ACL57515.1| multidrug resistance efflux pump-like protein [Methylobacterium
           nodulans ORS 2060]
          Length = 373

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 82/261 (31%), Gaps = 15/261 (5%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL---ENKSSLLRALLSSHQKDLTM 201
           Y +   +VF     SV+   K+ +    SI  +  +      K S   A L + +  +  
Sbjct: 60  YDARVREVFVRPGDSVFAGQKVAVVDSPSISKSLAEFSVERAKISSRIAQLEARKAIVAA 119

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           M  + +  A   N+          S L L  ++HE         E       E  +    
Sbjct: 120 MVPIAQVGAKQANEFMADLNKAKISGLALNRSLHEVTAASFTATERLMTITSEKTS---- 175

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           +  +L  N+   A+  +    L K   +  + +P++G I  +   +           +  
Sbjct: 176 LDTELASNRAALAEITAASENLRKVYAEGVLTAPVSGVI-GSAIANPGEVLTPGSNRLAS 234

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           +       + A +    +  V +G    V    +           I +I P+        
Sbjct: 235 IYTGTSFVL-AYMPESYLFDVSEGQPVQV--SAHHQS----VPGQIARILPVTDALPPEF 287

Query: 382 QTQEYYEVILKITDLAFSDNN 402
           Q         ++  ++ +D N
Sbjct: 288 QPPNKARDRGQVVKISLNDAN 308



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 54/160 (33%), Gaps = 2/160 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + V + +P+   +++  V  G  +  G  +   +    +  +    V    +   I 
Sbjct: 49  VTRDRVYVATPYDARVREVFVRPGDSVFAGQKVAVVDSPSISKSLAEFSVERAKISSRIA 108

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++    +     + +   +   E + D      S  +   N  +  V  +      R+
Sbjct: 109 QLEARKAIVAAMVPIAQVGAKQANEFMADLNKAKISGLA--LNRSLHEVTAASFTATERL 166

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +I   +  L+ + +  RA L+        ++ ++ +  +
Sbjct: 167 MTITSEKTSLDTELASNRAALAEITAASENLRKVYAEGVL 206


>gi|116695717|ref|YP_841293.1| multidrug resistance efflux pump [Ralstonia eutropha H16]
 gi|113530216|emb|CAJ96563.1| multidrug resistance efflux pump [Ralstonia eutropha H16]
          Length = 368

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 83/268 (30%), Gaps = 18/268 (6%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L      + +      +L+  + L  A+++  +  +        +    Q       
Sbjct: 103 RAALAKAEGAVAAQQALLANLDATARLQEAVIAQAKAGIAATNADTVRARDDQVRYASLV 162

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                S    ++   + K    +  E    A L     L  I    +Q Q + A   ++ 
Sbjct: 163 AKAAVSIQSSQKADSDYKQAQAN-GEKARAALLAAQRQLDVIGTQKQQAQASLAQATAER 221

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            I +       + +P+ GT+  N+      +A     L+ IVP S   ++ A     Q+ 
Sbjct: 222 DIAKLNLGYTELRAPVDGTV-GNRRARVGAFAGAGSQLLSIVPASG-LWVDANFKEGQLA 279

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VI 390
           H++ G    +       +  + F   +  + P    Q         T  + +      V 
Sbjct: 280 HMRPGMPVEI---EADVLPGRVFHGHVASLAPATGAQFSVLPPENATGNFTKIVQRVPVR 336

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +++ +         LR G         +
Sbjct: 337 IRLDEQDARLG--VLRPGLSVIAQVNTQ 362



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 40/125 (32%), Gaps = 3/125 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK---VSIKNLRC 108
              +V  I +   G I +  V +   +  G  L+  +D +    +   +    + + L  
Sbjct: 62  VGGDVTVIGAKVGGYIAEVAVTDNQTVHAGDVLVRIDDRDYRAALAKAEGAVAAQQALLA 121

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           ++D      + +  +      A  +   +  D   +Y S  +K      SS       K 
Sbjct: 122 NLDATARLQEAVIAQAKAGIAATNADTVRARDDQVRYASLVAKAAVSIQSSQKADSDYKQ 181

Query: 169 TRMRS 173
            +   
Sbjct: 182 AQANG 186


>gi|307310783|ref|ZP_07590429.1| secretion protein HlyD family protein [Escherichia coli W]
 gi|306908961|gb|EFN39457.1| secretion protein HlyD family protein [Escherichia coli W]
 gi|315060952|gb|ADT75279.1| undecaprenyl pyrophosphate phosphatase [Escherichia coli W]
          Length = 256

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 30  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 88

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 89  AEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 147

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 148 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLRGHVSSIG 198

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 199 RAIYDQS 205



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 38/122 (31%), Gaps = 11/122 (9%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKV 101
            G+I  E   V I    SG I +  +++   +  G  LLT +       E      L K 
Sbjct: 8   DGKIRAEQ--VSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKA 65

Query: 102 SIKNLRCHIDTEKSALDFLNN----KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                + + +  +      N     + D      ++ +  +         T  ++    I
Sbjct: 66  QSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEI 125

Query: 158 SS 159
            +
Sbjct: 126 RA 127


>gi|52425356|ref|YP_088493.1| AcrA protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307408|gb|AAU37908.1| AcrA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 326

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 63/175 (36%), Gaps = 4/175 (2%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +    + +G +  E   ++I + ++G +++  V+ G ++  G  L       +   +D 
Sbjct: 30  KLAGIAAVNGRL--ELKRLDIATLYAGRVEEMYVQEGDEVQPGQNLARLSSSISQTQVDA 87

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG-- 156
                +  +  +    + +D    +  V +   ++ ++   D L        +  NY   
Sbjct: 88  ANAQKQRAQEAVTRAVAQIDSQQQQLKVAKLELDNAQKLRRDNLVSASELERRQANYRAA 147

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +++V  +   K     ++   +  LE   S    +L    K   +   + E   V
Sbjct: 148 VAAVNTAKAAKAEADAAVNQAQAQLEQALSQNSDMLIKAPKAGWVEYQIAEVGNV 202


>gi|47213413|emb|CAF96073.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2604

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 74/192 (38%), Gaps = 5/192 (2%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L ++  KY    +++   G  
Sbjct: 1375 LEKTKQRLQSEVEDLMIDVERANGLAANLDKKQRNFDKVLAEWKQKYEEGQAEL--EGAQ 1432

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   ++    + Q++++ +     +   S ++L +
Sbjct: 1433 KEARSLGTELFKMKNSYEEALD---QLETMKRENKNLQQEISDLTEQIGETGKSIHELEK 1489

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
             ++ V     E++  + E +  L H         LE      E+ R L +          
Sbjct: 1490 AKKQVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEIEQIKR 1549

Query: 279  KLTILEKTREQK 290
                +  + +  
Sbjct: 1550 NSQRVTDSMQST 1561



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 78/217 (35%), Gaps = 15/217 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1167 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKAKGNLEKMCRTLEDQLSELKTKN 1224

Query: 146  HSTCSKVFNYGISSVY---------RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++ + G              R ++ K   +  +   +     +   L+  +    
Sbjct: 1225 DENTRQINDLGAQKARLLTENGEFGRQIEEKEALVSQLTRGKQAFTQQIDELKRQIEEEV 1284

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1285 KAKNALAHGLQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1344

Query: 257  NYLKEISRDLEQNQRTFADEMS----KLTILEKTREQ 289
              L+E  + L Q  +   +++     K   LEKT+++
Sbjct: 1345 EELEEAKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR 1381



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 78/217 (35%), Gaps = 15/217 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 2300 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKAKGNLEKMCRTLEDQLSELKTKN 2357

Query: 146  HSTCSKVFNYGISSVY---------RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++ + G              R ++ K   +  +   +     +   L+  +    
Sbjct: 2358 DENTRQINDLGAQKARLLTENGEFGRQIEEKEALVSQLTRGKQAFTQQIDELKRQIEEEV 2417

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 2418 KAKNALAHGLQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 2477

Query: 257  NYLKEISRDLEQNQRTFADEMS----KLTILEKTREQ 289
              L+E  + L Q  +   +++     K   LEKT+++
Sbjct: 2478 EELEEAKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR 2514



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 74/198 (37%), Gaps = 5/198 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E  ++ +  + +       I+  K            LE+A    E        K   + +
Sbjct: 1103 ELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATAAALRKKQADSVA 1162

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     I ++ R +K KL + +S Y  ++++++ SS + A+  +      M + L ++ +
Sbjct: 1163 E-LGEQIDNLQR-VKQKLEKEKSEY--KMEIDDLSSNMEAVAKAKGNLEKMCRTLEDQLS 1218

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              +   ++  R +     +    + E     R I E  +    +     +  ++ +++ +
Sbjct: 1219 ELKTKNDENTRQINDLGAQKARLLTENGEFGRQIEE-KEALVSQLTRGKQAFTQQIDELK 1277

Query: 271  RTFADEMSKLTILEKTRE 288
            R   +E+     L    +
Sbjct: 1278 RQIEEEVKAKNALAHGLQ 1295



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 74/198 (37%), Gaps = 5/198 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E  ++ +  + +       I+  K            LE+A    E        K   + +
Sbjct: 2236 ELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATAAALRKKQADSVA 2295

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     I ++ R +K KL + +S Y  ++++++ SS + A+  +      M + L ++ +
Sbjct: 2296 E-LGEQIDNLQR-VKQKLEKEKSEY--KMEIDDLSSNMEAVAKAKGNLEKMCRTLEDQLS 2351

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              +   ++  R +     +    + E     R I E  +    +     +  ++ +++ +
Sbjct: 2352 ELKTKNDENTRQINDLGAQKARLLTENGEFGRQIEE-KEALVSQLTRGKQAFTQQIDELK 2410

Query: 271  RTFADEMSKLTILEKTRE 288
            R   +E+     L    +
Sbjct: 2411 RQIEEEVKAKNALAHGLQ 2428


>gi|319942114|ref|ZP_08016432.1| efflux transporter [Sutterella wadsworthensis 3_1_45B]
 gi|319804324|gb|EFW01208.1| efflux transporter [Sutterella wadsworthensis 3_1_45B]
          Length = 395

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 81/214 (37%), Gaps = 7/214 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+ I+   +G   N   V E++   +GI++K   + G ++  G PL   +       +  
Sbjct: 53  PLHIATVLTGR-TNSYTVAEVRPQVNGILQKRLFKEGQEVKAGDPLYQIDPAIYEAQLKS 111

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            + S+   R  +   ++  D   ++  V   A   + +          +  + V     +
Sbjct: 112 SEASLAQARAQLT--QATADAKRSRELVKTNAVSKQSDDAA--QAAMKTAQAAVKAAEAA 167

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLEN--KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +   + +  T++RS    R+      + +LL A  ++    +  +  ++     + +D+
Sbjct: 168 VLTAKINLDYTKVRSPISGRVSRSEFTEGALLSAYQTTALTTVQQLDPIYVDVTQTADDM 227

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            + +R +   TL+       +  ++      Y +
Sbjct: 228 LRIQREIAAGTLKTDTQGAAEVELILSDGSKYAQ 261


>gi|262045088|ref|ZP_06018129.1| HlyD family secretion protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259037603|gb|EEW38833.1| HlyD family secretion protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 355

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 68/207 (32%), Gaps = 7/207 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
                   + ++ ++    W +L P         S+G I   +  V+I S  +G I    
Sbjct: 5   KKRWAGYFVGLLVVLAAAAWWLLRPPGLPAGFAGSNGRIEATE--VDIASKIAGRIDTIL 62

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + QG  L   +     +        IK     +   ++ LD   ++    E   
Sbjct: 63  VKEGQFVHQGEVLARMDTRVLNEQRLEAAAQIKEAESAVLAARALLDQRQSEMRASEAVV 122

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           + R+ +L     ++    S   +   +   + L        S        + + S  RA 
Sbjct: 123 KQRQAELDSTAKRH--VRSNTLSQRGAVSAQQLDDDRAAAESARAALESAKAQVSAARAA 180

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           + + +  +   +   E +  ++  +  
Sbjct: 181 IEAARTSIIQAQTRVEASQATEQRILA 207


>gi|195434052|ref|XP_002065017.1| GK14900 [Drosophila willistoni]
 gi|194161102|gb|EDW76003.1| GK14900 [Drosophila willistoni]
          Length = 2208

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 94/257 (36%), Gaps = 24/257 (9%)

Query: 53   EDNVVEIKSPFSGIIKKFQ--VENGSQILQGTPLLTFEDIETT-----DLIDLKKVSIKN 105
                   +     +IK  +  ++   +      LL +E +++      + +  +K+++++
Sbjct: 1378 ASQDQVDQHLE--LIKSLKNTIQEFEEKDAKQLLL-YEQLQSEYHSSMEKLREEKMALQS 1434

Query: 106  LRCHIDTEKSAL-DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF------NYGIS 158
                ++ E  +L D +  K++ LE+  E+  ++  + L +      ++           S
Sbjct: 1435 QFDDLNAETQSLKDTMTQKFESLEQQLEASVQEKAEVLKQSQQLEEQLELVVNQKAQIQS 1494

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK----NLFEKNAVSQN 214
             +   L+    +++ +     D   KS  L+  L +       ++     L E   +   
Sbjct: 1495 QMNEQLETLNMKLKDLEEQEADGSMKSQQLKEQLETVLNQKAQLQTEKDELLESFNMKLK 1554

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHIN---ELYDEANLEFANYLKEISRDLEQNQR 271
            DL  +       + +L E + +       I    E   EA  +  N L++        Q+
Sbjct: 1555 DLEHERAEASAKSQQLEEQLKDVIEQKAQIQTEKEKQFEAFKDLENELRQAKEKQLDEQQ 1614

Query: 272  TFADEMSKLTILEKTRE 288
              A    K   L+K+++
Sbjct: 1615 LKASITEKEEALKKSQQ 1631



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 80/202 (39%), Gaps = 12/202 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            E   LID  + +I ++R  +   +SAL     + NK +  ++  ES E+Q  +       
Sbjct: 1030 EKNALIDATERTINDMREQMTNLESALLEKSVIVNKVEDYQRQIESLEKQNAEITMVCEE 1089

Query: 148  TCSKVFNYGISSVYR--------SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               KV    +S  +         + +  +  + S+     DL  + + L+  L  H+  +
Sbjct: 1090 LQVKVKENTLSESFAMSSIANDSNSEQDIKEIVSLNTTVSDLRVRETELQDQLEQHRHQI 1149

Query: 200  TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                    +  V   +LN++   +    +EL+ +  E K  +  +       + +  + L
Sbjct: 1150 RTKDETISQLQVDIQELNERCLSMDVQQVELQSS-AEHKQQMLDLQIAKSLDDAQRIDQL 1208

Query: 260  KEISRDLEQNQRTFADEMSKLT 281
            +E++ DL +        +++L 
Sbjct: 1209 QEMNADLTERNIRAEKLLNELK 1230



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 60/180 (33%), Gaps = 2/180 (1%)

Query: 111  DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            D  +S+L  L       E   ES   +    +       +   +  I   +    +    
Sbjct: 1304 DRYESSLSKLKESLSSAEAKLESIIVEHNSNIKTLKDEHNLALDNVIKEKHELESLYDES 1363

Query: 171  MRSIYLNRLDLENKSSL--LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             + I    + LE+ +S   +   L   +     ++   EK+A       Q +   + S  
Sbjct: 1364 QKMIEKLTIQLEDSASQDQVDQHLELIKSLKNTIQEFEEKDAKQLLLYEQLQSEYHSSME 1423

Query: 229  ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            +LRE     ++    +N              + + + LE + +  A+ + +   LE+  E
Sbjct: 1424 KLREEKMALQSQFDDLNAETQSLKDTMTQKFESLEQQLEASVQEKAEVLKQSQQLEEQLE 1483


>gi|194909958|ref|XP_001982044.1| GG11254 [Drosophila erecta]
 gi|190656682|gb|EDV53914.1| GG11254 [Drosophila erecta]
          Length = 2102

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 74/206 (35%), Gaps = 2/206 (0%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +       +  K  SI+ +   ++ +  AL  L ++   L+   +  +E+L         
Sbjct: 1682 DLTRLQMALQEKDCSIRQMAERLENQNRALTQLEDRCTALKSTVDQLKERLQKSAVSETQ 1741

Query: 148  TCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               ++      +S      +    +++ +  +    EN+  +L   L S Q +L  ++  
Sbjct: 1742 LRGELKTLQKELSEQGHCSQANEDKLKLVQKSLQTAENEKRILTERLDSAQTNLNELRRS 1801

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +        L +Q   +      L   +   K       +    +     N  +E+SR 
Sbjct: 1802 QQAQLDGNQRLQEQVTDLEVQRSALESQLRIAKWNQESGGDKGLTSGNGGGNGEEELSRQ 1861

Query: 266  LEQNQRTFADEMSKLTILEKTREQKT 291
            L+ +QR  ++  SKL  L+   +Q  
Sbjct: 1862 LKSSQREKSELRSKLQTLQDKVKQLE 1887



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 70/206 (33%), Gaps = 7/206 (3%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            +   +          ++   + L      E      + N     E+A +   E++L    
Sbjct: 979  VARLQKELEQCQRKAQETKTQLLNAARAAESDFNQKIANLQACAEEAAKRHGEEILQLRN 1038

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK--SSLLRALLSSHQKDLTM 201
                   +      ++    ++    R+ ++  +   L  +   +L+RA     Q  L  
Sbjct: 1039 ALEKRMQQALQALQTAKDDEIEKLQERLATLQAHIESLVQQHEEALIRAESEKQQALLIA 1098

Query: 202  MKN---LFEK-NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             ++   + E+  AVS++   +QE  + +S  E      +Q+  +  + +   +   +   
Sbjct: 1099 HRDKQAVAERLEAVSRDLKTEQE-SLDRSRREANARDEKQRAAIAQLKDEMVQMRTKEEE 1157

Query: 258  YLKEISRDLEQNQRTFADEMSKLTIL 283
            +  ++   + + +   +    +   L
Sbjct: 1158 HKIKLEECIRKQELQLSSLREERESL 1183



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 71/199 (35%), Gaps = 6/199 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--KVFN 154
            DL +  ++NL   +   +   D   ++    +K  +   EQ L    K     +  +   
Sbjct: 1523 DLVRKGVRNLMHQVAQLEREKDDYKSQLGAAKKQLQDAAEQQLRCDAKLGKLQAMLRNLQ 1582

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               S++    KMK++ ++++        ++  +LR  L+  +  L       E+N  ++ 
Sbjct: 1583 EEKSNLETDRKMKISAIQALEEKLKHRNDECQMLRERLAQTEMQLAAT---SEENGQNEE 1639

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             L +  +   K   E R+   E   +    ++L  +  +     L  +   L++   +  
Sbjct: 1640 RLEKSRQQCSKLDNEKRQLQEELAKVEGRASKLDLQ-RVAMEGDLTRLQMALQEKDCSIR 1698

Query: 275  DEMSKLTILEKTREQKTIL 293
                +L    +   Q    
Sbjct: 1699 QMAERLENQNRALTQLEDR 1717



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 78/223 (34%), Gaps = 19/223 (8%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L+  E  +   L+   +   + +   ++     L       D   +   +R+E+    + 
Sbjct: 1084 LIRAESEKQQALLIAHRDK-QAVAERLEAVSRDLKTEQESLDRSRREANARDEKQRAAIA 1142

Query: 144  KYHSTCSKVFNYGIS---SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            +      ++          +   ++ +  ++ S+   R  L   S  L+  +   +  + 
Sbjct: 1143 QLKDEMVQMRTKEEEHKIKLEECIRKQELQLSSLREERESLCRVSEELKMEIRLKEDKME 1202

Query: 201  MMKNLFE---------KNAVS--QNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINE 246
               N  +         +  +   + +L    R +  S +E      +  E ++ ++ +  
Sbjct: 1203 GTNNELQDALRKSKEGEGFIDSLRKELTDCRRQLADSNIERDKYSGSNKELRDHVKRVES 1262

Query: 247  LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               E        L++IS +LE  + +  +E ++L+ + K  E 
Sbjct: 1263 AKREQARAIEEALQKIS-NLEDTKNSLENERTRLSTILKETEN 1304



 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 74/213 (34%), Gaps = 13/213 (6%)

Query: 85   LTFEDIETTDLIDLKKVSIKNL-RCHIDTEKSALDF--------LNNKYDVLEKAFESRE 135
            L  + ++  + I   K  +  L +  ++ E   L          L  +  + + A  +R+
Sbjct: 800  LRIQSVDQCNEIGELKKELAVLDKARLELETDNLSAGEKLKCLQLEKEKILQDLACVTRD 859

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
               +           +  N  +    + L+        +  N  ++       + ++  H
Sbjct: 860  RGDIHNQLTAMCRKKEALNEELMRTRQRLEQTTETNSRLNRNLEEMVKDVEEKQVVIDLH 919

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            +KD   +  L    A  +++    E +++ +   L      +  + R + E         
Sbjct: 920  EKDTHRLNELL---AALRSEKESLESVLFDTNTSLEATEERRSQLERDLQEALVR-EESL 975

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             N++  + ++LEQ QR   +  ++L    +  E
Sbjct: 976  KNHVARLQKELEQCQRKAQETKTQLLNAARAAE 1008


>gi|158290982|ref|XP_312510.4| AGAP002434-PA [Anopheles gambiae str. PEST]
 gi|157018156|gb|EAA07978.4| AGAP002434-PA [Anopheles gambiae str. PEST]
          Length = 1152

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 86/228 (37%), Gaps = 7/228 (3%)

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
           K+ Q +NG+ +   + L+  +     + I   K   +       +E+   D   ++    
Sbjct: 705 KELQDKNGTLLTVQSQLVDLDSELQRERIRTAKAQTEATETRQLSERWERDAAVHREQAE 764

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK-SS 186
           + A   +    L+   +      +            L++ + ++ ++     +L+ +   
Sbjct: 765 QAA---QRLAALEGDIRQRDALIEKLRKEREQAAVDLRVAMMKLETMQSEYGELQQRHRR 821

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
            L A+L+  Q+ L  ++    ++  ++  L QQ      +   + +NIH++K    +   
Sbjct: 822 ELDAMLAKEQQQLEELRQSLTESFRNELQLKQQSFDTALAQNYISKNIHQEKVRELNELH 881

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              E      + + E    L   +R  AD       ++K+ ++ T+ +
Sbjct: 882 YRLEDAHNDLSAMAEAEEQL---RRQLADCERSAAAMKKSLDEATLQA 926


>gi|167032135|ref|YP_001667366.1| RND family efflux transporter MFP subunit [Pseudomonas putida GB-1]
 gi|166858623|gb|ABY97030.1| efflux transporter, RND family, MFP subunit [Pseudomonas putida
           GB-1]
          Length = 366

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 54/156 (34%), Gaps = 6/156 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFL 120
            G + K  VE G ++    PL   +  +    ++  +  +     ++     E+     L
Sbjct: 66  GGKVSKRLVEEGQRVKADQPLAELDPQDVRLQLEANRAQMAAAEANLSLVRAERDRYQKL 125

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM---RSIYLN 177
             +  V    +++ E      L +     ++    G  + Y  L+     +   R + + 
Sbjct: 126 LERQMVSHSQYDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAGVIAKRQVEVG 185

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           ++    ++    A     +  + + +  F + AV Q
Sbjct: 186 QVVAAGQTVFTLAADGEREVAIGLPEQQFARFAVGQ 221



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 55/187 (29%), Gaps = 14/187 (7%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN--LEFANYLK 260
           K L E+    + D    E       L+L  N  +      +++ +  E +   +      
Sbjct: 71  KRLVEEGQRVKADQPLAELDPQDVRLQLEANRAQMAAAEANLSLVRAERDRYQKLLERQM 130

Query: 261 EISRDLEQNQRTFADEMSKLTILE-------KTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                 +  +  +   +++L   +          E   + +P AG I   Q         
Sbjct: 131 VSHSQYDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAGVIAKRQV-EVGQVVA 189

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q +  +    +   +   +  +Q      G   +V    +   R   F+  I ++ P 
Sbjct: 190 AGQTVFTLAADGER-EVAIGLPEQQFARFAVGQPVSVELWSHPQER---FQGRIRELSPA 245

Query: 374 ISQQDNN 380
              +   
Sbjct: 246 ADPRSRT 252


>gi|289674185|ref|ZP_06495075.1| secretion protein HlyD [Pseudomonas syringae pv. syringae FF5]
          Length = 390

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 67/203 (33%), Gaps = 22/203 (10%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  +E +V + G +L+  N V++ +  SG ++  +V+ G  + +   L   + +   +
Sbjct: 50  AEVTDMEYAVMAQG-VLHGRNQVDVGAQVSGQLQSLKVKPGDMVKKNQLLAEIDPLPARN 108

Query: 95  LIDLKKVSIKNLRC-----------------HIDTEKSALDFLNNKYDVLEKAFESREEQ 137
            +    V I+ L                         S         D      E++   
Sbjct: 109 ALRQAVVKIEQLTAERDATLHKLKLAESNDRRYQALGSTTAVSKADQDKARFELEAQRAN 168

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    +  +   +     I   Y  +   +       + +       +++   ++    
Sbjct: 169 LVSLTAQLQTARVQEEAARIKLDYTRIFAPMDGQVLAIVTQEG----QTVIADQMAPVIL 224

Query: 198 DLTMMKNLFEKNAVSQNDLNQQE 220
            +  +  +  K  VS+ D+ + +
Sbjct: 225 KMAQLDTMTVKAQVSEADVLKIK 247



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 71/261 (27%), Gaps = 22/261 (8%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK-----------NAVSQNDLNQQERIVY 224
            N++D+  + S     L     D+     L  +            AV + +    ER   
Sbjct: 68  RNQVDVGAQVSGQLQSLKVKPGDMVKKNQLLAEIDPLPARNALRQAVVKIEQLTAERDAT 127

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              L+L E+   +   L     +      +    L+    +L            +     
Sbjct: 128 LHKLKLAESNDRRYQALGSTTAVSKADQDKARFELEAQRANLVSLTAQLQTARVQEEAAR 187

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHV 342
              +   I +P+ G ++              Q  P++  +       ++A+V+   +  +
Sbjct: 188 IKLDYTRIFAPMDGQVLAI-VTQEGQTVIADQMAPVILKMAQLDTMTVKAQVSEADVLKI 246

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFS 399
           K G       P   D R       IE      + Q           +Y  +  + +L   
Sbjct: 247 KPGLAVYFTIPGDPDKRYNATLKAIEPGPVDAASQSGATGENSKAVFYNALFDVPNLES- 305

Query: 400 DNNIELRNGFPAEVLFTAKNT 420
                      A V    +  
Sbjct: 306 ----RFYIDMTANVRIVLEAK 322


>gi|283835877|ref|ZP_06355618.1| secretion protein, HlyD family [Citrobacter youngae ATCC 29220]
 gi|291068050|gb|EFE06159.1| secretion protein, HlyD family [Citrobacter youngae ATCC 29220]
          Length = 355

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/406 (12%), Positives = 118/406 (29%), Gaps = 78/406 (19%)

Query: 19  RMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
               + I+ ++  I W +L P    E   +S+G I   +  V+I +  +G I    V  G
Sbjct: 9   MWWGMGILVMVAAIAWWMLRPAGIPEGFAASNGRIEATE--VDIATKIAGRIDTILVSEG 66

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + QG  L   +     +        IK     +   ++ L+   ++    +   + RE
Sbjct: 67  QFVRQGEVLAKMDTRVLQEQRLEAIAQIKEAESAVAAARALLEQRQSETRAAQSVVKQRE 126

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L     ++  + S      +S           ++                 +A +S+ 
Sbjct: 127 AELQSVSKRHVRSRSLSQRGAVSE---------QQLDDDRAAAESARAALESAKAQVSAA 177

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +  +   +                      S ++ +  +   +   R I    D++ L+ 
Sbjct: 178 KAAIEAART---------------------SIIQAQTRVEAAQATERRIAADIDDSELK- 215

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                                 +P  G + Y +           
Sbjct: 216 --------------------------------------APRDGRVQY-RVAEPGEVLSAG 236

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             ++ +V  S   Y+   +  +Q   +K G  A +      D+R     + +  +     
Sbjct: 237 GRVLNMVDLSD-VYMTFFLPTEQAGLLKIGGEARLVLDAAPDLRIPATISFVASVAQFTP 295

Query: 376 Q--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  + ++ + +  + V  +I       +   ++ G P         
Sbjct: 296 KTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGMAWVRVDE 341


>gi|265753482|ref|ZP_06088837.1| ABC transporter permease [Bacteroides sp. 3_1_33FAA]
 gi|263235196|gb|EEZ20720.1| ABC transporter permease [Bacteroides sp. 3_1_33FAA]
          Length = 416

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 81/227 (35%), Gaps = 22/227 (9%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLI 96
           +   G++L    ++ + +   G +++   E G+ + +G  +L   +       +++   +
Sbjct: 62  IRVIGQVLPS-RMIYLDAIEGGRVEERLHEEGAMVKKGDAILRLSNPLLNIGIMQSEADL 120

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY- 155
             ++  ++N R  ++ E+ +L              + R  Q    + +            
Sbjct: 121 AYQENELRNTRISMEQERLSLKQDRIGMQKDFLIKKRRYGQYKRLMEEQLIAREDYLQAT 180

Query: 156 -GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +    L +   R+R   L RL    + S L   + + ++ L +++   E       
Sbjct: 181 EEYEAAKEQLSVLDERIRQDSLFRL---TQISSLDENIMNMKRSLALVRERLEN------ 231

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              + +  +      L   I +  +   HI ++   A+L+    + E
Sbjct: 232 --LKVKAPIDGQVGNLEAQIGQSISAGEHIGQIIT-ADLKVQALIDE 275



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 69/202 (34%), Gaps = 25/202 (12%)

Query: 152 VFNYGISSVYRSLKMKLTRMR----SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           + N GI      L  +   +R    S+   RL L+     ++      ++     K L E
Sbjct: 108 LLNIGIMQSEADLAYQENELRNTRISMEQERLSLKQDRIGMQKDFLIKKRRYGQYKRLME 167

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           +  +++ D  Q             E     K  L  ++E   + +L     +  +  ++ 
Sbjct: 168 EQLIAREDYLQA-----------TEEYEAAKEQLSVLDERIRQDSLFRLTQISSLDENIM 216

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +R+ A    +L       E   + +PI G +   ++          + + +I+     
Sbjct: 217 NMKRSLALVRERL-------ENLKVKAPIDGQVGNLEA-QIGQSISAGEHIGQIITAD-- 266

Query: 328 TYIRAKVTPKQIQHVKKGYTAT 349
             ++A +    ++ V +   A 
Sbjct: 267 LKVQALIDEHYVERVVQELPAD 288


>gi|161506503|ref|YP_001573624.1| RND family efflux transporter MFP subunit [Burkholderia multivorans
           ATCC 17616]
 gi|189348835|ref|YP_001942030.1| heavy metal resistance protein [Burkholderia multivorans ATCC
           17616]
 gi|160346741|gb|ABX19824.1| efflux transporter, RND family, MFP subunit [Burkholderia
           multivorans ATCC 17616]
 gi|189338973|dbj|BAG48040.1| heavy metal resistance protein [Burkholderia multivorans ATCC
           17616]
 gi|325521247|gb|EGD00128.1| heavy metal resistance protein [Burkholderia sp. TJI49]
          Length = 491

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 93/308 (30%), Gaps = 31/308 (10%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           KS  D  +  +   + A    + QL                     +   +K    R   
Sbjct: 137 KSGNDAASFPFARADGAIALTDAQLATSRIALAKAGPAQIATPF-QLPGEIKFNEDRTAH 195

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMM--KNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +      +  + S+      +  + L ++   +L ++    +++L   ER +  +     
Sbjct: 196 VVPRVAGIVEQVSVSLGQNVAKGQVLAVIASTDLADR----RSELLTAERRLSGA----- 246

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +E++  L       ++   +    L+E    ++  ++  A   + +        +  
Sbjct: 247 RATYERERTLWQERISAEQDYQQAQVQLREAEIAVQNARQKLAALNAPVGAGA--LNRYE 304

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P AGTIV   + +       +   M ++      +    V  +++  V+ G  ATV 
Sbjct: 305 LRAPFAGTIVEKHA-TPGEAI-AADASMFVISDLSTVWAEMAVPAQRLNDVRVGRDATVS 362

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              +              +  ++ +Q                  +   + +   R G   
Sbjct: 363 ATAFESRSSGPIA----YVGSLLGEQTRTA-----------PARVVLPNPDRVWRPGMFV 407

Query: 412 EVLFTAKN 419
            V   A  
Sbjct: 408 NVSVDAGR 415



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 3/101 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLN 121
           GI+++  V  G  + +G  L      +  D       + + L   R   + E++      
Sbjct: 202 GIVEQVSVSLGQNVAKGQVLAVIASTDLADRRSELLTAERRLSGARATYERERTLWQERI 261

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +     ++A     E  +          +     G  ++ R
Sbjct: 262 SAEQDYQQAQVQLREAEIAVQNARQKLAALNAPVGAGALNR 302


>gi|118579205|ref|YP_900455.1| RND family efflux transporter MFP subunit [Pelobacter propionicus
           DSM 2379]
 gi|118501915|gb|ABK98397.1| efflux transporter, RND family, MFP subunit [Pelobacter propionicus
           DSM 2379]
          Length = 372

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 67/205 (32%), Gaps = 22/205 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V + DL  ++        +L   + + K     ++        +  +           +Q
Sbjct: 91  VRKGDLLVRQ-DTSSEEAQLPGLLAQVKLARAELDRAARMVAEKIISQADYDRSVALHDQ 149

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                 +S+L  +  T  +KTI +P AG +   +  +     ++   ++ +   +   ++
Sbjct: 150 A-----LSQLNTVRATIAKKTIRAPFAGRV-GIRQVNLGQVLKEGDAIVTLQSLN-PIHV 202

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              +  +Q+  ++ G    +            F+  I  I P++     N++ Q      
Sbjct: 203 DFSLPQQQLARLRTGQGMRLTCDALPGET---FQGRISAITPLVDVDTRNVKLQ------ 253

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF 415
                    +   +LR G    V  
Sbjct: 254 -----ATALNPGEKLRPGMFVSVAV 273



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/140 (10%), Positives = 46/140 (32%), Gaps = 1/140 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +   E+G+ + +G  L+  +       +      +K  R  +D     +       
Sbjct: 78  GKVIRIAFESGTTVRKGDLLVRQDTSSEEAQLPGLLAQVKLARAELDRAARMVAEKIISQ 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +++    ++ L        +   K      +      ++ L ++       + L++ 
Sbjct: 138 ADYDRSVALHDQALSQLNTVRATIAKKTIRAPFAGRVGIRQVNLGQVLKEGDAIVTLQS- 196

Query: 185 SSLLRALLSSHQKDLTMMKN 204
            + +    S  Q+ L  ++ 
Sbjct: 197 LNPIHVDFSLPQQQLARLRT 216


>gi|6996451|emb|CAB75427.1| chromokinesin [Homo sapiens]
          Length = 1232

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 8/186 (4%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             + I+     ++K++ ++ +    + E+  L+    K D  +     R  + L  L   
Sbjct: 549 QLQPIQYQYQDNIKELELEVINLQKEKEELVLELQTAKKDANQAKLSERRRERLQELEGQ 608

Query: 146 HSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENK-SSLLRALLSSHQKD 198
            +   K  N          S  R++      +R +   R+ L  +            QK 
Sbjct: 609 IADLKKKLNEQSKLLKLKESTERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKK 668

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +  L E++   Q +L + ER   K +  LR    E     + + +   +   E A+ 
Sbjct: 669 DKEVIQLKERDRKRQYELLKLERNFQKQSNVLRRKTEEAAAANKRLKDALQKQR-EVADK 727

Query: 259 LKEISR 264
            KE   
Sbjct: 728 RKETQS 733



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 82/233 (35%), Gaps = 12/233 (5%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            VE   ++ +G      +  +  + I L + + + +   ++  +       +   ++E  
Sbjct: 395 LVEENEKLSRGLSEAAGQTAQMLERIILTEQANEKMNAKLEELRQHAACKLDLQKLVETL 454

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN------- 183
            +   ++ ++ +       +++ +  ++ +  ++   + +   +  +     +       
Sbjct: 455 EDQELKENVEIICNLQQLITQLSDETVACMAAAIDTAVEQEAQVETSPETSRSSDAFTTQ 514

Query: 184 ---KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHEQKN 239
              + + +   L    K L + + L  K   + + L   +     +  EL  E I+ QK 
Sbjct: 515 HALRQAQMSKELVELNKALALKEALARKMTQNDSQLQPIQYQYQDNIKELELEVINLQKE 574

Query: 240 MLRHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKT 291
               + EL           L E  R+ L++ +   AD   KL    K  + K 
Sbjct: 575 KEELVLELQTAKKDANQAKLSERRRERLQELEGQIADLKKKLNEQSKLLKLKE 627


>gi|56118751|ref|NP_001008104.1| TATA element modulatory factor 1 [Xenopus (Silurana) tropicalis]
 gi|51704163|gb|AAH81306.1| tmf1 protein [Xenopus (Silurana) tropicalis]
          Length = 938

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 78/202 (38%), Gaps = 3/202 (1%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E  + + L K ++          +  +  LN+  +  EK    ++  L D   K  S  +
Sbjct: 610 EVEEELKLLKQTLDGKEEVEKQHRENIRKLNSMVERQEKDLSRQQADLDDLQEKNRSLQA 669

Query: 151 KVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            + N    ++ ++++   K +  +   L+  +L  K  L  AL  + ++     + L  +
Sbjct: 670 ALDNSYRELAELHKANATKASEAQEAALS-CELRAKEELCFALEKAKEESQKQQEALAIQ 728

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
               +  L + E+   +    LR+ I E +  L+       E +    +  + + R +E 
Sbjct: 729 VTDLRLALQRAEQQAARKEDYLRQEIAELQQRLQEGETRNQELSQSVTSATRPLLRQIEN 788

Query: 269 NQRTFADEMSKLTILEKTREQK 290
            Q T A + S    LEK    +
Sbjct: 789 LQATLAAQTSSWEKLEKNLSDR 810


>gi|73960938|ref|XP_852813.1| PREDICTED: similar to centromere protein F (350/400kD) [Canis
            familiaris]
          Length = 1449

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 82/231 (35%), Gaps = 20/231 (8%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT-EKSALDFLNNKYDVLEKAFE 132
             G+ + +G   +     +  + +   +  I+ LR  I+  EK  L  L    +   KA  
Sbjct: 910  EGALMEKGEVAVRLSSTQ--EEVHQLRKGIEKLRIRIEADEKKQLHVLEKLRESERKADA 967

Query: 133  --------SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                     RE Q+ +   +     ++     + ++   +++    ++ +  + + +  +
Sbjct: 968  LQDKIENLERELQMSEENQELVILDAENSKAEVETLKTQMELTTKSLKDLESDLVTVRFE 1027

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               L   L   Q  ++ +  L       +  L ++ER   +   E R  +   +  L+ +
Sbjct: 1028 KENLIKQLQDKQGQVSELDTLLSS---FKGQLEEKEREKIEMKEESRAALEMLRTQLKEL 1084

Query: 245  NELY------DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            NE         E        L  + +++ Q +       ++L   EK + +
Sbjct: 1085 NEEIAALCHDQEIQKVKEQSLDPLVQEIHQLRNNTEKLKARLEADEKEQLR 1135


>gi|148262608|ref|YP_001229314.1| RND family efflux transporter MFP subunit [Geobacter uraniireducens
           Rf4]
 gi|146396108|gb|ABQ24741.1| efflux transporter, RND family, MFP subunit [Geobacter
           uraniireducens Rf4]
          Length = 376

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 59/186 (31%), Gaps = 22/186 (11%)

Query: 239 NMLRHINELYDEANLEFANYLKEI------SRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            +LR +    D A+  +   +K+          L+ +      + +++   E   ++K I
Sbjct: 107 ALLRSLRAAADLASTVYIRDIKQFAVKGVSQATLDADAADLKVKQAQVAQQEALVDKKII 166

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P  G  +   + +   Y      ++ +       Y    +  +++  +  G T  V  
Sbjct: 167 RAPFTGR-LGITTVNPGQYLNPGDKIVTLQALD-AIYADFYLPQQELASIALGQTVAVTT 224

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             Y       F   I  ++P +  +  N Q            +   ++    L  G    
Sbjct: 225 DSYPGRI---FSGRITAVNPRVDPETRNFQV-----------EATIANPRHVLLPGMYVT 270

Query: 413 VLFTAK 418
           V   A 
Sbjct: 271 VEVRAG 276


>gi|268680345|ref|YP_003304776.1| efflux transporter RND family, MFP subunit [Sulfurospirillum
           deleyianum DSM 6946]
 gi|268618376|gb|ACZ12741.1| efflux transporter, RND family, MFP subunit [Sulfurospirillum
           deleyianum DSM 6946]
          Length = 395

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 70/226 (30%), Gaps = 22/226 (9%)

Query: 206 FEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            EK  + ++ D    +    +S   ++      +  + +     +    E+ +  +E   
Sbjct: 88  VEKGQILAELDPALLDAQAAQSAANVKSAEASLELAIANEKRSRELLAKEYIS-KQEFDT 146

Query: 265 DLEQNQRTFADEMSKLTILEKTREQ---KTILSPIAGTIVYNQSFSSSNYAQQ---SQPL 318
            ++  +   A         +K +       I SP++G +V  Q             +  L
Sbjct: 147 TVQALKAARAALDLARAQAQKDKTNQGYTIIRSPVSGVVVDRQID-VGQTVAASLQAPVL 205

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
            KI    +   I +      I  +K G   T     + ++    F  ++ ++    +   
Sbjct: 206 FKIAQDLRQMQIDSNFAEADIGRIKVGQAVTFAVDAFPNL---SFSGVVRQVRLNATTVS 262

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV-LFTAKNTTLA 423
           N +              +   + +  L  G  A V +  A+   + 
Sbjct: 263 NVVTYDV---------VVKVENPDEILIPGMTAYVNVIIAEKKNVL 299



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 73/214 (34%), Gaps = 20/214 (9%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLP----------------IEISVSSSGEILN 52
           L++     +  + +L  +GI G   W                     +  SVS++G +  
Sbjct: 4   LQKILFNKITLVIVLIGLGIGGYKAWKAYTKPPLEANYKFYTLEKGDVTQSVSANGTLNP 63

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID- 111
              +V + +  SG + K  V+   ++ +G  L   +             ++K+    ++ 
Sbjct: 64  LV-LVTVGTQVSGKVIKLYVDFNDRVEKGQILAELDPALLDAQAAQSAANVKSAEASLEL 122

Query: 112 --TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
               +     L  K  + ++ F++  + L           ++      +  Y  ++  ++
Sbjct: 123 AIANEKRSRELLAKEYISKQEFDTTVQALKAARAALDLARAQAQKDKTNQGYTIIRSPVS 182

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +       +     +SL   +L    +DL  M+
Sbjct: 183 GVVVDRQIDVGQTVAASLQAPVLFKIAQDLRQMQ 216


>gi|158422981|ref|YP_001524273.1| membrane fusion protein [Azorhizobium caulinodans ORS 571]
 gi|158329870|dbj|BAF87355.1| membrane fusion protein [Azorhizobium caulinodans ORS 571]
          Length = 314

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 62/217 (28%), Gaps = 22/217 (10%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q  L   E  V ++  +L     E +  L        +         +  +         
Sbjct: 94  QIALANAEANVARAKADLENKQAEAERRLHLSALAVSD------EEKQSFAATANMALAA 147

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           +   ++     +    +  I+SP+ G +    +    ++A   Q  + +V  S   ++  
Sbjct: 148 YQQALADRDKAKLDLSRTRIVSPVNGYVTNLLT-QVGDFATTGQRALSVV-DSDSFWVDG 205

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL--QTQEYYE-- 388
                 +  +  G  A V    Y +        I   I    +Q D +        +   
Sbjct: 206 YFEETLLNSIHVGDRAEVALMAYPERLSGHVTGIGRGIAVPNAQPDGSGLATVNPVFTWV 265

Query: 389 -------VILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                  V + + D+     +I L  G  A +     
Sbjct: 266 RLAQRVPVRVVLDDV---PPSIVLSAGLTASITILDG 299



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 9/69 (13%), Positives = 27/69 (39%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
                VV +    SG I +  V+    + +G  L+  E  +    +   + ++   +  +
Sbjct: 52  TVRAYVVTVAPQVSGRIVELPVKADQFVHKGDLLMVIEPDDYQIALANAEANVARAKADL 111

Query: 111 DTEKSALDF 119
           + +++  + 
Sbjct: 112 ENKQAEAER 120


>gi|324500139|gb|ADY40075.1| Myosin-4 [Ascaris suum]
          Length = 1966

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 62/198 (31%), Gaps = 3/198 (1%)

Query: 92   TTDLIDLKKVSIKNL-RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            T   I++ K     L +   D E+  L+    +   L K       +L D L +      
Sbjct: 1167 TEAQIEINKKREAELAKLRRDIEEGNLNH-EGQLAALRKKQSDAVAELSDQLDQIQKQKQ 1225

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            K+     + + R  +    ++      + + E  +    A L+  Q            + 
Sbjct: 1226 KI-EKDKAQILRDTEELAAQLDQETAAKANNEKLAKQFEAQLADLQNRADEQTRQLHDHT 1284

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              +N L  +   + +   EL E I   + +   I    +E         +E      Q +
Sbjct: 1285 SMRNRLTNESSDLARQLGELEEQIAALQRVKAQITTQLEEMRQAADEEARERQTLSGQVK 1344

Query: 271  RTFADEMSKLTILEKTRE 288
               A+       LE+  E
Sbjct: 1345 NLQAEAEQAHNNLEEEIE 1362



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/213 (10%), Positives = 75/213 (35%), Gaps = 13/213 (6%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS- 147
            + +    +      I++++  I+ E+   + + +++   EK FE  + +  +    +   
Sbjct: 1646 NADAQKNLRRCTEQIRDIQLQIEDEQRQKEDVRDQFLSAEKRFEVLQSEKDEIASSFDQV 1705

Query: 148  -TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                K     ++ +   L     +  ++   +   E +   + A L     +    ++ F
Sbjct: 1706 ERARKQAELDVAEMREQLSELNAQTSNLNALKRKTEGEIQAIHADLEETLNEYRTSEDNF 1765

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL-----------EF 255
            +K++     +  + R   + + ++       +  +R +    +EA             + 
Sbjct: 1766 KKSSADALRVADELRQEQQRSQQIERTRKALEAQVRDVQVQLEEAEQAAMKGGRKVIAKL 1825

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                 E+  +L+  QR + +    ++  E+   
Sbjct: 1826 EQRAHELEAELDGEQRRYQEVNKNVSKAERHVR 1858



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 69/227 (30%), Gaps = 17/227 (7%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC-------HIDTEKSALDFLNNKYDVLE 128
             Q+ +       +  E  + +        NL          I    + L+   N+Y   E
Sbjct: 1703 DQVERARKQAELDVAEMREQLSELNAQTSNLNALKRKTEGEIQAIHADLEETLNEYRTSE 1762

Query: 129  KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS-SL 187
              F+      L    +               + R+ K    ++R + +   + E  +   
Sbjct: 1763 DNFKKSSADALRVADELRQE-----QQRSQQIERTRKALEAQVRDVQVQLEEAEQAAMKG 1817

Query: 188  LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             R +++  ++    ++   +       ++N+      +   EL+  + E K     + +L
Sbjct: 1818 GRKVIAKLEQRAHELEAELDGEQRRYQEVNKNVSKAERHVRELQFQVDEDKKNFERMQDL 1877

Query: 248  YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              +   +     K     LE+ +      + K   L+   E     +
Sbjct: 1878 VGKLQDKIKMQKK----QLEEAEELANLNLQKYRQLQHQLEDAEERA 1920



 Score = 43.5 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 71/195 (36%), Gaps = 7/195 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ED++   L + +  S   +R     E   +D L  +   LE +    E +      + 
Sbjct: 928  KLEDLQ-QQLAETEDESADLMRAKKKAEGD-MDALKKRVQDLEMSVRKAESERQSKEHQI 985

Query: 146  HSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             S   ++      I+ + + +K +    + +  +    E++S+ +  + +  ++ L  ++
Sbjct: 986  RSVQDEMQQQEELIAKLTKEMKHQEEMNKKVIEDLQGQEDRSNHINKIKAKLEQTLDDLE 1045

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN---YLK 260
               E+   ++ D+ + +R         +E I E       +         E  N    L+
Sbjct: 1046 ENLERERRNKADVEKAKRKAEGELKICQETIEEITRQKHDLENNVKRKETELNNLSSRLE 1105

Query: 261  EISRDLEQNQRTFAD 275
            +    + + QR   +
Sbjct: 1106 DEQSMVSKLQRQIKE 1120


>gi|325207588|gb|ADZ03040.1| chromosome segregation protein SMC [Neisseria meningitidis
           NZ-05/33]
          Length = 1161

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 74/198 (37%), Gaps = 25/198 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +   EQ      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSL--AAADKATEQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E           Y++E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENEL--------YVEEKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKT 286
                A+   +L  LE+T
Sbjct: 359 WAMQVAEHEERLPELEET 376


>gi|325202666|gb|ADY98120.1| chromosome segregation protein SMC [Neisseria meningitidis
           M01-240149]
          Length = 1161

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 74/198 (37%), Gaps = 25/198 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +   EQ      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSL--AAADKATEQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E           Y++E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENEL--------YVEEKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKT 286
                A+   +L  LE+T
Sbjct: 359 WAMQVAEHEERLPELEET 376


>gi|296158127|ref|ZP_06840959.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
 gi|295891463|gb|EFG71249.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
          Length = 291

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 74/210 (35%), Gaps = 33/210 (15%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           K+ L++R +  +++  +        +A +      +  +      + ++   ++ L   +
Sbjct: 96  KAELQMRRDDAQRRADM--------DALVVSKENRENATHTASAAEASYQQALATLDAAK 147

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
              E+  ++SP+ G +     F   +YA      + IV  S   ++       ++ HV  
Sbjct: 148 LNLERTRVVSPVDGYVTNLSVF-RGDYATVGSAKLAIV-DSHSFWVYGYFEETKLPHVHV 205

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ---------------EYYEV 389
           G  A VR            +  +E I   I  +DN    +               +   V
Sbjct: 206 GDKAAVRLMS-----GGTLQGHVESISRGIYDRDNPESRELLADVNPTFNWVRLAQRVPV 260

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +KI  +    +N+ L  G    V+ T  +
Sbjct: 261 RVKIDSV---PDNVVLAAGITCTVVITPGS 287



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 50/150 (33%), Gaps = 5/150 (3%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           RN    +    +  +  +IG + W     ++   +  G +  E  ++ I    SG I   
Sbjct: 4   RNIVGFVATAVIFIVAILIGRVLWVHY--MDEPWTRDGRVRAE--IINIAPDVSGAIVDL 59

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V++   + +G  L+  +       ++  + ++   +  +   +          D L  +
Sbjct: 60  PVKDNQLVKKGDLLMQIDPSHYQLAVEQAQAAVAARKAELQMRRDDAQR-RADMDALVVS 118

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            E+RE           S    +     + +
Sbjct: 119 KENRENATHTASAAEASYQQALATLDAAKL 148


>gi|288962344|ref|YP_003452639.1| secretion protein [Azospirillum sp. B510]
 gi|288914610|dbj|BAI76095.1| secretion protein [Azospirillum sp. B510]
          Length = 397

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 53/180 (29%), Gaps = 16/180 (8%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            +     + EL  E   +          +++Q Q    +  + +        QK I +P 
Sbjct: 135 AQRAQARLAELNLERYRDLRRSQATPQSNVDQYQAQLDEINANMKRSSALIGQKLIKAPF 194

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G  +  +  +  +Y      ++ +       YI   +  +    +  G    +      
Sbjct: 195 DGD-LGIRQVNVGDYVNPGAAIVTLT-DLSQLYINFSLPEQAFPKLSVGQDVLINVDALP 252

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 F A I  I+P +S     ++ Q               +   +LR G  A V   
Sbjct: 253 GR---DFAARITTIEPQVSADTRAVKVQ-----------ATMDNRERQLRPGMFANVRVV 298



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 45/125 (36%), Gaps = 5/125 (4%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  I   +S+ G +     V  +    +G + +   E+G+++  G PL+   D     
Sbjct: 73  ATVQTIPKYLSAIGTLQAARQV-TVAPEVAGRVDRIPFESGARVKAGDPLVQLNDATEQA 131

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +  ++   +    +++  +     L       +   +  + QL +       + + +  
Sbjct: 132 DLLAQRAQARLAELNLERYRD----LRRSQATPQSNVDQYQAQLDEINANMKRSSALIGQ 187

Query: 155 YGISS 159
             I +
Sbjct: 188 KLIKA 192


>gi|194880506|ref|XP_001974453.1| GG21085 [Drosophila erecta]
 gi|190657640|gb|EDV54853.1| GG21085 [Drosophila erecta]
          Length = 1744

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 86/257 (33%), Gaps = 31/257 (12%)

Query: 53   EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               + +++    G IK   V+    +     +L  +    T  ++ ++   + LR  +  
Sbjct: 1354 SGELQQVQGAN-GEIKDSLVKVEELVK----VLEEKLQAATSQLESQQAENRELRELLLK 1408

Query: 113  EKSA--------------LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             +                L  L      L++    +E  L +  GK   + S + +   S
Sbjct: 1409 SQENEGNLQGESLAVTEKLRQLEQANGELQETLCKKENSLKELEGKLQESGSLLQSQQKS 1468

Query: 159  --SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
               +   L+    + R++      L  + S L+      QK L   ++L EK       L
Sbjct: 1469 HNELQDKLEKAQQKERTLQDETSKLAEQLSQLKQANEELQKSLQQKQSLLEKGNEFDTQL 1528

Query: 217  NQQERIV----------YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             + ++++           K   +L+  + E +  L   NE    A LE     +++    
Sbjct: 1529 AEYQKVIDEMDDAASVKAKLLEQLQNRVVELEAALHQANEAQKTAYLETKELKRKLESLE 1588

Query: 267  EQNQRTFADEMSKLTIL 283
             +  R      +++   
Sbjct: 1589 LEKSREILSLKTQMNGA 1605



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 73/217 (33%), Gaps = 11/217 (5%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +   L  F   E       +++++         E++  DF     +  E+      
Sbjct: 589 ELVSKDEALEKFSLSECGIDNLRRELALLKEENEKQAEQAQADFTRKLAEKSEEVIRVTS 648

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E       +     S        +     ++  T +R       +L  +   +   L+  
Sbjct: 649 EL------QSLKAASDSLESERVNKTDECEILQTEVRMRDEQIKELVQQLDEVTTQLNVQ 702

Query: 196 QKD---LTMMKNLFEKNAVSQNDLNQ-QERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           + D   L  M  L ++    ++ L +  ER + +   E  +N  E++ + + +++L   A
Sbjct: 703 KADSSALDDMLRLQKEGTEEKSTLLEKTERELVQIKEEAAKNQQEKEQLEKQLSDLKQLA 762

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             E     ++   ++ Q +        +L + +   E
Sbjct: 763 EQEKL-VREKTETEVNQIKLEKETVEQQLALKQNELE 798



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 67/202 (33%), Gaps = 5/202 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +       K          + +E  +L   ++  +  E+  ++ E ++L    +      
Sbjct: 627 QAQADFTRKLAEKSEEVIRVTSELQSLKAASDSLES-ERVNKTDECEILQTEVRMRDEQI 685

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K     +  V   L ++     ++       +  +     LL   +++L  +K    KN 
Sbjct: 686 KELVQQLDEVTTQLNVQKADSSALDDMLRLQKEGTEEKSTLLEKTERELVQIKEEAAKN- 744

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             Q +  Q E+ +        +    ++     +N++  E        L     +LE  Q
Sbjct: 745 --QQEKEQLEKQLSDLKQLAEQEKLVREKTETEVNQIKLEKET-VEQQLALKQNELEDCQ 801

Query: 271 RTFADEMSKLTILEKTREQKTI 292
           R  ++    L  ++    +K +
Sbjct: 802 RKQSETEVYLQEIKDIHSKKDL 823


>gi|157363672|ref|YP_001470439.1| RND family efflux transporter MFP subunit [Thermotoga lettingae
           TMO]
 gi|157314276|gb|ABV33375.1| efflux transporter, RND family, MFP subunit [Thermotoga lettingae
           TMO]
          Length = 349

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 38/89 (42%), Gaps = 4/89 (4%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +++  G +  ED+  E+K+  SG+++K  VE G  +  G  L+  +D +           
Sbjct: 47  TITVYGTVEAEDSA-EVKALVSGVVEKVYVEEGDSVKAGDVLVELDDSDYRLTYIKALQD 105

Query: 103 IKNLR---CHIDTEKSALDFLNNKYDVLE 128
            +  +     +  E+  L+    K D+  
Sbjct: 106 YETAKNSGSKLLIEQRQLELEIAKRDLER 134



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 60/178 (33%), Gaps = 13/178 (7%)

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMS-KLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            L +   L++         +   ++   +L I ++  E+  I S + G +         +
Sbjct: 96  RLTYIKALQDYETAKNSGSKLLIEQRQLELEIAKRDLERCKITSLVDGVVTSLSV-KVGD 154

Query: 311 YAQQSQPLMKIVPHSKL--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
           Y  +   +  +     +   YI A V       VK G TA V F  + ++      A + 
Sbjct: 155 YVSKGTTVDVVAKVVNVNNLYISAAVEEMDYSKVKIGQTAIVSFDAFENVSFP---AKVT 211

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLA-----FSDNNIELRNGFPAEVLFTAKNTT 421
            I    +Q  + + T      ++  ++ +       +   ++  G   E      N T
Sbjct: 212 YIGSE-AQTSSGIVTIPIKLSLVTPSETSPNYAKIKEAMEKIIPGLSCEAEIVVLNKT 268


>gi|301770601|ref|XP_002920719.1| PREDICTED: cingulin-like protein 1-like [Ailuropoda melanoleuca]
          Length = 1295

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 62/189 (32%), Gaps = 6/189 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS-- 150
               +  + S      H+   +   + L    + LE++    + Q+ D  G         
Sbjct: 801 ASRSNTSEQSQLGAELHVKALQEEKEKLRESIEELEQSVTRLQRQIADVKGDEAKAKEML 860

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K        +  +L       R     R  LE++   ++  LS   ++   +    +   
Sbjct: 861 KECERESRQLEEALVQARKEEREATSVRRSLESELEDVQRNLSQATQEQKQLSEKLKDET 920

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD----EANLEFANYLKEISRDL 266
             +  L + +  +      L + I + +  +  I E+      E   +   Y ++  R+L
Sbjct: 921 EQKEQLRRLKNEMENERWHLDKTIEKLQKEMADIVEVSRISTLELQNQLDEYKEKNRREL 980

Query: 267 EQNQRTFAD 275
            + QR   +
Sbjct: 981 AEMQRQLKE 989



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 75/224 (33%), Gaps = 3/224 (1%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V+N   + +    +     E     D K      L+  ++  +  L     +   ++
Sbjct: 625 QLEVKNQQNMKEERERMRVSLEELQGQHDSKVEENSVLQQRLEKSEGELRKNLEELFQVK 684

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E  + Q+ D   +      +  +    S  R     +  +     +  DL       
Sbjct: 685 MEREQHQTQIRDLQDQLSEMHDE-LDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQ 743

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQN-DLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             LL   +++LT +K   ++   S + ++++ +         LRE++ E    +  +   
Sbjct: 744 EDLLRKRERELTALKGALKEEVASHDLEMDKLKEQYDAELQVLRESVEEATKNVEVLASR 803

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            + +          +   L++ +    + + +L       +++ 
Sbjct: 804 SNTSEQSQLGAELHVKA-LQEEKEKLRESIEELEQSVTRLQRQI 846



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 72/204 (35%), Gaps = 8/204 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++ +  +  +L ++  +     ++ EKS L  +      L+      EE+L D+    
Sbjct: 968  QLDEYKEKNRRELAEMQRQLKEKTLEAEKSRLTTMK-----LQDEMRLMEEELRDYQRAQ 1022

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                +K     +    + L+ +L     +  +R  L  +     + L    ++     +L
Sbjct: 1023 DEALTK--RQLLEQTLKDLEYELEAKSHLKDDRSRLVKQMEDKVSQLEMELEEERNNSDL 1080

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIH-EQKNMLRHINELYDEANLEFANYLKEISR 264
              +      +  +Q R        +++++  ++ ++ R   +L         +Y      
Sbjct: 1081 LSERITRSREQLEQMRSELLQERAVKQDLECDKISLERQNKDLKSRIIHLEGSYRSSKEG 1140

Query: 265  DLEQNQRTFADEMSKLTILEKTRE 288
             + Q +   A+   +L   E+ R 
Sbjct: 1141 LVVQMEARIAELEDRLESEERDRA 1164


>gi|298293863|ref|YP_003695802.1| efflux transporter RND family, MFP subunit [Starkeya novella DSM
           506]
 gi|296930374|gb|ADH91183.1| efflux transporter, RND family, MFP subunit [Starkeya novella DSM
           506]
          Length = 400

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 72/205 (35%), Gaps = 15/205 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +    ++ L L +  +E+   L        +A        +     ++  +   A  
Sbjct: 127 LRAQLAQAEAQLTLDKLRNERAQQLLKNQSGSKDAADAAEATERISEAKIDALKAQIAQT 186

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
            + L           I +P+ GT+V   +    +    +Q  P++  +   +   + A+V
Sbjct: 187 QATLEGDLANLGYTKIYAPMDGTVVSITAR-EGSTLNANQSAPIILRIADLQTMTVTAQV 245

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               I  +  G  A   F        ++++  + +I+P  +  ++ +     Y V++ + 
Sbjct: 246 AEGDIPKITVGTPAY--FSTLGLPD-RRWQGTVRQIEPTPTIVNDVVL----YNVLIDVP 298

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
                + ++ L     A+V F    
Sbjct: 299 -----NADLMLMTDMTAQVFFRLGE 318



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 53/141 (37%), Gaps = 3/141 (2%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  IE +V++  ++  + N V++ +  SG ++    + G+ + +G  L   +       +
Sbjct: 59  LGDIETTVTAIAKMQPK-NYVDVGTQVSGQLRTIHPDVGALVKKGDLLAEIDPTVYQTRV 117

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              + S+ NLR  +   ++ L     + +  ++  +++                ++    
Sbjct: 118 AGDRASLDNLRAQLAQAEAQLTLDKLRNERAQQLLKNQSGS--KDAADAAEATERISEAK 175

Query: 157 ISSVYRSLKMKLTRMRSIYLN 177
           I ++   +      +     N
Sbjct: 176 IDALKAQIAQTQATLEGDLAN 196


>gi|254707980|ref|ZP_05169808.1| efflux transporter, RND family, MFP subunit [Brucella pinnipedialis
           M163/99/10]
 gi|261315472|ref|ZP_05954669.1| efflux transporter [Brucella pinnipedialis M163/99/10]
 gi|261304498|gb|EEY07995.1| efflux transporter [Brucella pinnipedialis M163/99/10]
          Length = 383

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 27/193 (13%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-----------QRTFADEMSKLTI 282
           I E       I     E  L+ A   ++    L              +   A+    L  
Sbjct: 114 IAELDAETEQIAVAKAETALKDAQTTRQRIARLRATNTATEVQAVGAELAVANAQLALQD 173

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +    ++ + +PI G +      +  NY      + +I        I   V  +    +
Sbjct: 174 AQLALSRRMVRAPITGIVGILPVNA-GNYVTAQTSIARI-DDRSTVLIDIWVPERFAPQI 231

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G   T     +        K  I  +D ++ +    L       V  ++ +       
Sbjct: 232 KVGQPLTAESTAFPGEIY---KGRINAVDNMLDEASRTLH------VRAEVPNAED---- 278

Query: 403 IELRNGFPAEVLF 415
             LR G    V  
Sbjct: 279 -RLRAGMSFSVTI 290



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 3/105 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKS 115
           +    SG + K QV  G  + +G  +   +       +   + ++K+    R  I   ++
Sbjct: 89  VTPYSSGYMTKLQVRAGDTVKEGDLIAELDAETEQIAVAKAETALKDAQTTRQRIARLRA 148

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                  +    E A  + +  L D          +    GI  +
Sbjct: 149 TNTATEVQAVGAELAVANAQLALQDAQLALSRRMVRAPITGIVGI 193


>gi|254671447|emb|CBA08972.1| putative chromosome partition protein [Neisseria meningitidis
           alpha153]
          Length = 1161

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 74/198 (37%), Gaps = 25/198 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +   EQ      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSL--AAADKATEQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E           Y++E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENEL--------YVEEKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKT 286
                A+   +L  LE+T
Sbjct: 359 WAMQVAEHEERLPELEET 376


>gi|150002801|ref|YP_001297545.1| membrane fusion efflux protein [Bacteroides vulgatus ATCC 8482]
 gi|212690864|ref|ZP_03298992.1| hypothetical protein BACDOR_00352 [Bacteroides dorei DSM 17855]
 gi|254882303|ref|ZP_05255013.1| membrane fusion efflux protein [Bacteroides sp. 4_3_47FAA]
 gi|294777269|ref|ZP_06742724.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
           PC510]
 gi|149931225|gb|ABR37923.1| membrane fusion efflux protein [Bacteroides vulgatus ATCC 8482]
 gi|212666593|gb|EEB27165.1| hypothetical protein BACDOR_00352 [Bacteroides dorei DSM 17855]
 gi|254835096|gb|EET15405.1| membrane fusion efflux protein [Bacteroides sp. 4_3_47FAA]
 gi|294448889|gb|EFG17434.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
           PC510]
          Length = 364

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 83/242 (34%), Gaps = 20/242 (8%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNML 241
             S ++  +     + +   + + +   + +   LN  E  V  + +  R+   +   M 
Sbjct: 66  QISGIIDEVYKEAGQKIKKGEVIAKVKVIPELGQLNSAESRVRLAEINARQGETDFARMK 125

Query: 242 R--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           +      +  E   +    +K+   +L+  +         +T  + +     I S I G 
Sbjct: 126 KLFESKLISSEEYEKSEVAVKQAREELQTAKDNLEIVKEGITKNKASFSSTLIRSTIDGL 185

Query: 300 IVYNQSFSSSNYA-----QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           I+     + ++            +  +   +     R  +   ++  + +G    +    
Sbjct: 186 ILDVPVKAGNSVIMSNTFNDGTTIATVANMND-LIFRGNIDETEVGRIHEGMPVKITLGA 244

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
             ++   +F A +E I P   +++   Q    +E+   IT      ++I +R+G+ A   
Sbjct: 245 LQNM---EFDAQLEYISPKGVEENGANQ----FEIKAAIT----VPDSITIRSGYSANAE 293

Query: 415 FT 416
             
Sbjct: 294 IV 295



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 3/143 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  ++ +  ++G+I   D +  IK   SGII +   E G +I +G  +   + I    
Sbjct: 40  AEITDLKKTTVATGKIEPRDEI-LIKPQISGIIDEVYKEAGQKIKKGEVIAKVKVIPELG 98

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            ++  +  ++     I+  +   DF   K     K   S E +  +   K      +   
Sbjct: 99  QLNSAESRVR--LAEINARQGETDFARMKKLFESKLISSEEYEKSEVAVKQAREELQTAK 156

Query: 155 YGISSVYRSLKMKLTRMRSIYLN 177
             +  V   +        S  + 
Sbjct: 157 DNLEIVKEGITKNKASFSSTLIR 179


>gi|14582245|gb|AAK69424.1|AF275938_7 putative accessory protein PisE [Carnobacterium maltaromaticum]
          Length = 326

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/307 (10%), Positives = 85/307 (27%), Gaps = 40/307 (13%)

Query: 120 LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
           +     +     +  +  L   +   +   +K    G   V     +             
Sbjct: 48  VRVPAQLTATKIDKLQVPLEANIKVNNLKENKEVKKGEVLVMFDTSVLQNEKEQFEQENT 107

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            LE++    +  + S  K+  + ++  E    +Q      E+    +     + +   K 
Sbjct: 108 SLEDQKKAAQLFIESIAKEQNLFEDEDEFGYSNQLKSLLLEKETQNTE----QVLATTKQ 163

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            +  + E   + N    N  ++                           + T+ SP  G 
Sbjct: 164 KIAVLIETKKKNNYTLQNITEQ-------------------------LVRGTLKSPSTGI 198

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVP--HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           +  N+  +      +   L +I P          A +   ++  +K G     +      
Sbjct: 199 VHLNEEVTGQIDVSKGTVLAEIYPKQKESQLMFTALLPADEVTRIKVGMDVHFKLDK-KG 257

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
           +  +  +  +++I     +     +   +Y +   +    + +N      G   EV    
Sbjct: 258 VASQTIEGTLKEIS----ETSMTTEQGTFYTIKGTLQSSKYFNNRY----GMTGEVSLII 309

Query: 418 KNTTLAQ 424
              +  Q
Sbjct: 310 GKKSYWQ 316


>gi|261867756|ref|YP_003255678.1| multidrug resistance protein A [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413088|gb|ACX82459.1| multidrug resistance protein A [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 243

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 67/203 (33%), Gaps = 17/203 (8%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE-----QNQRTFADEMSKLTILEKT 286
             I ++         +  EANL+        ++ L      + Q      +S L      
Sbjct: 6   GAIDKESLQHAREAVVIAEANLKAVKNQLAANQSLLLNVPLKEQPEIQKAISSLKQAWLN 65

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            ++  I+SP+ G +   +S            LM ++  +   ++ A     Q++ ++ G 
Sbjct: 66  LQRTKIVSPVDGYVAR-RSTQIGQKVAVGSTLMAVI-SNDKMWVDANFKETQLKDMRIGQ 123

Query: 347 TATVRFPHYADIREKKFKAIIEKI--------DPIISQQDNNLQTQEYYEVILKITDLAF 398
              + F  Y      KF   +E I          + +Q       +    V ++++  A 
Sbjct: 124 PVKLSFDLYGHDV--KFDGKVEGIEMGTGSAFSLLPAQNATGNWIKVIQRVPVRVSLDAQ 181

Query: 399 SDNNIELRNGFPAEVLFTAKNTT 421
                 LR G    V     +T+
Sbjct: 182 QLARYPLRIGLSTLVEVNIADTS 204


>gi|153209709|ref|ZP_01947486.1| efflux transporter, RND family, MFP subunit [Coxiella burnetii 'MSU
           Goat Q177']
 gi|165919049|ref|ZP_02219135.1| efflux transporter, RND family, MFP subunit [Coxiella burnetii RSA
           334]
 gi|212218287|ref|YP_002305074.1| acriflavin resistance periplasmic protein [Coxiella burnetii
           CbuK_Q154]
 gi|120575269|gb|EAX31893.1| efflux transporter, RND family, MFP subunit [Coxiella burnetii 'MSU
           Goat Q177']
 gi|165917244|gb|EDR35848.1| efflux transporter, RND family, MFP subunit [Coxiella burnetii RSA
           334]
 gi|212012549|gb|ACJ19929.1| acriflavin resistance periplasmic protein [Coxiella burnetii
           CbuK_Q154]
          Length = 351

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 64/194 (32%), Gaps = 22/194 (11%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +    ++  + +  +   K             N   +   +E++      +   A   SK
Sbjct: 98  QLDNAQAQADYQSAVTAMKLARTKYERSKLLLNQAISQ--QELAALKADMESKEASVQSK 155

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L  L     +K + +P +G ++        +Y +    L+ +V ++       +V    +
Sbjct: 156 LAAL----NEKVVNAPFSG-VLGAFQVQVGDYVKAGDLLVTLV-NTSQLRADFQVPENFL 209

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +K+G   T+    Y     K F   +  I P +S    +          + I  L  +
Sbjct: 210 PELKQGQLVTITTGTYPQ---KTFYGTVSFISPTVSSDTRS----------ISIQALVPN 256

Query: 400 DNNIELRNGFPAEV 413
           D  + L  G    V
Sbjct: 257 DKEL-LSPGMFVHV 269



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 58/155 (37%), Gaps = 3/155 (1%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
              I  +V++ G +     VV I +   G I +   ++G ++  G P++  ++ +     
Sbjct: 50  TADIPNTVNALGSLSAV-KVVTISAESDGRIAEIHFKSGQEVDTGMPIVQLDNAQAQADY 108

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDV--LEKAFESREEQLLDFLGKYHSTCSKVFN 154
                ++K  R   +  K  L+   ++ ++  L+   ES+E  +   L   +        
Sbjct: 109 QSAVTAMKLARTKYERSKLLLNQAISQQELAALKADMESKEASVQSKLAALNEKVVNAPF 168

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            G+   ++       +   + +  ++     +  +
Sbjct: 169 SGVLGAFQVQVGDYVKAGDLLVTLVNTSQLRADFQ 203


>gi|86610310|ref|YP_479072.1| RND family efflux transporter MFP subunit [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558852|gb|ABD03809.1| efflux transporter, RND family, MFP subunit [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 457

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/150 (11%), Positives = 45/150 (30%), Gaps = 1/150 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   +  SG++     V  +    SG + +  V+ G +++ G  L   +  +    I   
Sbjct: 78  LTQRLRVSGQVQPLRQV-NVSPRESGRLAELLVDQGDEVVAGQLLARMDYGDLASGIRQA 136

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  I+ L+  +  +++                   +  L     +      +      S 
Sbjct: 137 QARIQELQARLAEQQAGERPQVIAAAQARVDAARSQVDLAQRELERIQALVQAGVVARSE 196

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           + +           +   + +LE      R
Sbjct: 197 LDQRSARLEQAQADLRAAQQELERLQLGSR 226


>gi|84394500|ref|ZP_00993211.1| membrane-fusion protein [Vibrio splendidus 12B01]
 gi|84374877|gb|EAP91813.1| membrane-fusion protein [Vibrio splendidus 12B01]
          Length = 368

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  +    + +  L+ + E++ I +P  G +   ++     Y Q       IV     
Sbjct: 142 EAEANYYSLSADIESLKASIERREIRAPFDGKV-GIRNVYLGQYLQSGT---DIVRLEDT 197

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V+   I  +  G    +    Y    EK F+  I  I+P +S Q   +Q Q 
Sbjct: 198 SVMRLRFTVSQTDISRINVGQAIDIFVDAYP---EKPFEGSISAIEPAVSIQSGLIQVQ- 253

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +N+ +LR+G  A    
Sbjct: 254 ----------ADIPNNDGKLRSGMFARANI 273


>gi|237712646|ref|ZP_04543127.1| membrane fusion efflux protein [Bacteroides sp. 9_1_42FAA]
 gi|237723587|ref|ZP_04554068.1| membrane fusion efflux protein [Bacteroides sp. D4]
 gi|229438040|gb|EEO48117.1| membrane fusion efflux protein [Bacteroides dorei 5_1_36/D4]
 gi|229453967|gb|EEO59688.1| membrane fusion efflux protein [Bacteroides sp. 9_1_42FAA]
          Length = 364

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 83/242 (34%), Gaps = 20/242 (8%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNML 241
             S ++  +     + +   + + +   + +   LN  E  V  + +  R+   +   M 
Sbjct: 66  QISGIIDEVYKEAGQKIKKGEVIAKVKVIPELGQLNSAESRVRLAEINARQGETDFARMK 125

Query: 242 R--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           +      +  E   +    +K+   +L+  +         +T  + +     I S I G 
Sbjct: 126 KLFESKLISSEEYEKSEVAVKQAREELQTAKDNLEIVKEGITKNKASFSSTLIRSTIDGL 185

Query: 300 IVYNQSFSSSNYA-----QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           I+     + ++            +  +   +     R  +   ++  + +G    +    
Sbjct: 186 ILDVPVKAGNSVIMSNTFNDGTTIATVANMND-LIFRGNIDETEVGRIHEGMPVKITLGA 244

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
             ++   +F A +E I P   +++   Q    +E+   IT      ++I +R+G+ A   
Sbjct: 245 LQNM---EFDAQLEYISPKGVEENGANQ----FEIKAAIT----VPDSITIRSGYSANAE 293

Query: 415 FT 416
             
Sbjct: 294 IV 295



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 51/143 (35%), Gaps = 3/143 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  ++ +  ++G+I   D +  IK   SGII +   E G +I +G  +   + I    
Sbjct: 40  AEITDLKKTTVATGKIEPRDEI-LIKPQISGIIDEVYKEAGQKIKKGEVIAKVKVIPELG 98

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            ++  +  ++     I+  +   DF   K     K   S E +  +   K      +   
Sbjct: 99  QLNSAESRVR--LAEINARQGETDFARMKKLFESKLISSEEYEKSEVAVKQAREELQTAK 156

Query: 155 YGISSVYRSLKMKLTRMRSIYLN 177
             +  V   +        S  + 
Sbjct: 157 DNLEIVKEGITKNKASFSSTLIR 179


>gi|255037910|ref|YP_003088531.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
 gi|254950666|gb|ACT95366.1| efflux transporter, RND family, MFP subunit [Dyadobacter fermentans
           DSM 18053]
          Length = 350

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 67/199 (33%), Gaps = 18/199 (9%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           QQ   + K   +L+E   E   +  +  +   +   +           +   +  + + +
Sbjct: 93  QQGATIVKVDSKLKELSLEATELNINKLKKDTDRYNKLLAGNAATEVQVNDTKYNYDNAL 152

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           ++   +++     +I +PI+G IV         +      L  I+       ++  +   
Sbjct: 153 NQAEQIKQQISDASIQAPISGRIVKKNI-EPGEFVNVGTSLGTIL-DVSRLKVQVMINEN 210

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  +K+G    V    +     KK   +I  I P   +  N       Y V + +    
Sbjct: 211 DVYKLKEGQHVAVSTSIFP---GKKIDGVISYIAPQGDESHN-------YPVEITV---- 256

Query: 398 FSDNNIELRNGFPAEVLFT 416
              N+ EL+ G    V F 
Sbjct: 257 --KNSTELKAGTFVSVEFQ 273


>gi|226310368|ref|YP_002770262.1| efflux system [Brevibacillus brevis NBRC 100599]
 gi|226093316|dbj|BAH41758.1| putative efflux system [Brevibacillus brevis NBRC 100599]
          Length = 409

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 70/194 (36%), Gaps = 14/194 (7%)

Query: 36  ILLPIEISVSSSGEILNEDN-------VVEIK--SPFSGIIKKFQVENGSQILQGTPLLT 86
            + P++++  + G + +E           E++     SG I    V+ G  + +G  L T
Sbjct: 37  TVTPVQVATVAHGVVTSEAGLTAKLAPSEEVQMSPKTSGKIASLPVKLGQAVTKGQLLFT 96

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGK 144
            +  E ++ +  ++ +++  + ++    S  +   +  + D+ E      + +L     +
Sbjct: 97  LDTNELSNSVREQEAALRVAKANLTQAGSTSNQSLVEAQNDLTEAERALADAKLNQQRNQ 156

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-- 202
                  +    +  V  +L        +        + K+ +  +  S  + ++ +   
Sbjct: 157 TLLAEGAIATEKMEEVNTTLTKAQISYDNAKQKLQGAKQKTGVQVSAASVTESEVRLQNA 216

Query: 203 -KNLFEKNAVSQND 215
            + L     VS  D
Sbjct: 217 REQLANAKVVSPID 230



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 96/281 (34%), Gaps = 33/281 (11%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             L   LG+  +    +F    + +  S++ +   +R   + + +L    S     L   
Sbjct: 78  ASLPVKLGQAVTKGQLLFTLDTNELSNSVREQEAALR---VAKANLTQAGSTSNQSLVEA 134

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLE 254
           Q DLT       + A++   LNQQ      +   +  E + E    L      YD A  +
Sbjct: 135 QNDLTE-----AERALADAKLNQQRNQTLLAEGAIATEKMEEVNTTLTKAQISYDNAKQK 189

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                ++    +     +  +   +L    +      ++SPI G +            Q 
Sbjct: 190 LQGAKQKTGVQVSAA--SVTESEVRLQNAREQLANAKVVSPIDGFVASVN----GAVGQM 243

Query: 315 S--QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           +  QP++ +V  +    ++A ++   +  VK G    V          K   A +  I P
Sbjct: 244 AGQQPIVTVVKTN-PLVVKANLSEADVTKVKVGTVVKVN----VQSTGKTIDANVTAISP 298

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           ++  Q         Y V + I + +      EL++     V
Sbjct: 299 VMDSQLKA------YPVEITIPNAS-----HELKSDMVVNV 328


>gi|159464191|ref|XP_001690325.1| hypothetical protein CHLREDRAFT_169222 [Chlamydomonas reinhardtii]
 gi|158279825|gb|EDP05584.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 1110

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 74/214 (34%), Gaps = 7/214 (3%)

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G  L         + +  K V +  L   + ++++ L  L ++         S + +L  
Sbjct: 661 GESLAKL-----QEQLTDKSVELARLEKEVASKRTELAELEDRVRQQRFKLNSNDRELSS 715

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKDL 199
                    +++   G  +    +  +L    + +   +     K++ LR   ++ +   
Sbjct: 716 SAHSAALADTEMELRGKRAELSEVNTQLLAKTTEFETIVSSTAGKAAELREKTAALELAK 775

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             +++   + A + +   +Q+  V     +  +   E       +  L ++   +  + L
Sbjct: 776 EQLRDAESRRADADSQYQEQQSRVRSLRDQAEQLSAEVSATQSTMRRLREDLTTK-EDEL 834

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             ++R L   Q    +  S+L+      + K I 
Sbjct: 835 AAVNRQLNSKQAELKEITSELSTSRTALQAKEIR 868



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 66/203 (32%), Gaps = 20/203 (9%)

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYG 156
            ++ ++  R  +    + L     +++ +  +   +  +L +          ++      
Sbjct: 725 TEMELRGKRAELSEVNTQLLAKTTEFETIVSSTAGKAAELREKTAALELAKEQLRDAESR 784

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            +      + + +R+RS+      L  + S  ++ +   ++DLT  ++          +L
Sbjct: 785 RADADSQYQEQQSRVRSLRDQAEQLSAEVSATQSTMRRLREDLTTKED----------EL 834

Query: 217 NQQERIVYKSTLELRENIHE--------QKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
               R +     EL+E   E        Q   +R + +L   A  E+    K++   +  
Sbjct: 835 AAVNRQLNSKQAELKEITSELSTSRTALQAKEIRVVEDLKSAATFEYEGLQKQLEVKIND 894

Query: 269 NQRTFADEMSKLTILEKTREQKT 291
              T       L        +  
Sbjct: 895 CIGTDLRIDQDLASANGELSRTE 917


>gi|152981697|ref|YP_001353374.1| HlyD family secretion protein [Janthinobacterium sp. Marseille]
 gi|151281774|gb|ABR90184.1| HlyD family secretion protein [Janthinobacterium sp. Marseille]
          Length = 457

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 55/144 (38%), Gaps = 4/144 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I ++V++ G I N  N   ++   SG++++   + G Q+  G  L   +       +   
Sbjct: 81  IRVTVNAIGSI-NAANTAVVRVQVSGVLQQINFKEGQQVQAGQLLAQIDPRAFQATLGQA 139

Query: 100 KVSIKNLRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  +   +  +D  +   +    L +K  + ++  +++E  +    G   S    V +  
Sbjct: 140 EGVLARDKAQLDNARIDLARYKDLLSKDAIPKQQLDTQEALVRQLEGTVKSDQGTVDSAK 199

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLD 180
           +   Y  +   +     +  + L 
Sbjct: 200 LQLSYTRVTAPIAGRVGLKQSDLG 223



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/230 (10%), Positives = 70/230 (30%), Gaps = 7/230 (3%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           SV  + +  +    +   +          ++      Q +    + +     ++Q D   
Sbjct: 72  SVQEARRQDIRVTVNAIGSINAANTAVVRVQVSGVLQQINFKEGQQVQAGQLLAQIDPRA 131

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQRTFADE 276
            +  + ++   L  +  +  N    +    D  + +      L      + Q + T   +
Sbjct: 132 FQATLGQAEGVLARDKAQLDNARIDLARYKDLLSKDAIPKQQLDTQEALVRQLEGTVKSD 191

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL-MKIVPHSKLTYIRAKVT 335
              +   +       + +PIAG +   +     N  Q +    + I+  ++   +   V 
Sbjct: 192 QGTVDSAKLQLSYTRVTAPIAGRV-GLKQSDLGNVVQPADTNGVVIITQTRPIALVFSVP 250

Query: 336 PKQIQHVKKGYTA--TVRFPHYADI-REKKFKAIIEKIDPIISQQDNNLQ 382
              +  +     A  TV    +    + K     +  +D  I    + ++
Sbjct: 251 SANVPAITARLRANETVAVEAWDRTGKTKLATGQVATVDNAIDVTTDTIK 300


>gi|33598342|ref|NP_885985.1| putative HlyD-like secretion protein [Bordetella parapertussis
           12822]
 gi|33566900|emb|CAE39116.1| putative HlyD-like secretion protein [Bordetella parapertussis]
          Length = 374

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 26/238 (10%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRH 243
           +  + A+ S    +  +++       +   D  + E +    TL  L +++   +     
Sbjct: 76  ARGIAAVGSLRSDESVVLRPEVA-GRIQHIDFKEGEAVRAGQTLVRLDDSVPRAELDQAR 134

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEM----SKLTILEKTREQKTILSPIAGT 299
            N    ++    A  L+      +Q +   A  +    +   + +   ++ TI +P AG 
Sbjct: 135 ANLALAQSQFRRAQDLQGRGFVSQQARDEAASSLKVQQAAAALAQARLDKMTIRAPFAG- 193

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           IV  +  S  +Y  Q Q L    P        +  +V       V  G T +VR      
Sbjct: 194 IVGLRDVSVGDYVNQGQDLA---PLEAIDPLKVDFRVPEMYFSKVGVGQTLSVRLDALPG 250

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +    + ++  + P++     ++           +     ++ +  LR G  A V  
Sbjct: 251 EQR---QGVVYAVSPLVDAGGRSI-----------LLRATVANPDSVLRPGMFARVQL 294



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 51/143 (35%), Gaps = 5/143 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P    +++ G + ++++V  ++   +G I+    + G  +  G  L+  +D      +D
Sbjct: 73  TPFARGIAAVGSLRSDESV-VLRPEVAGRIQHIDFKEGEAVRAGQTLVRLDDSVPRAELD 131

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   +      +     L  +  V ++A +     L           +++    I
Sbjct: 132 QARANLALAQSQFRRAQD----LQGRGFVSQQARDEAASSLKVQQAAAALAQARLDKMTI 187

Query: 158 SSVYRSLKMKLTRMRSIYLNRLD 180
            + +  +          Y+N+  
Sbjct: 188 RAPFAGIVGLRDVSVGDYVNQGQ 210


>gi|28898763|ref|NP_798368.1| putative secretion protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|153837812|ref|ZP_01990479.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AQ3810]
 gi|260364163|ref|ZP_05776869.1| multidrug resistance efflux pump [Vibrio parahaemolyticus K5030]
 gi|260877246|ref|ZP_05889601.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AN-5034]
 gi|260897808|ref|ZP_05906304.1| multidrug resistance efflux pump [Vibrio parahaemolyticus Peru-466]
 gi|260901563|ref|ZP_05909958.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AQ4037]
 gi|28806981|dbj|BAC60252.1| putative secretion protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|149748833|gb|EDM59672.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AQ3810]
 gi|308087651|gb|EFO37346.1| multidrug resistance efflux pump [Vibrio parahaemolyticus Peru-466]
 gi|308090340|gb|EFO40035.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AN-5034]
 gi|308110922|gb|EFO48462.1| multidrug resistance efflux pump [Vibrio parahaemolyticus AQ4037]
 gi|308115228|gb|EFO52768.1| multidrug resistance efflux pump [Vibrio parahaemolyticus K5030]
          Length = 354

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 66/210 (31%), Gaps = 21/210 (10%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + +   +     SL+    +  ++Y  R       +  +A   +  ++ T +  L ++  
Sbjct: 78  RKYKIALEQAELSLQSAYEKEATLYSQREAALANIARAQATFDNAHREYTRLLTLSKQKV 137

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +SQ+ L+        S   L+      K +   + +   ++                   
Sbjct: 138 ISQSTLDNAFAQNQVSRAALKAERQNLKVIEAQLGDQKGQSTAVRI-------------- 183

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  + +   +       +L+P  G +   Q       A  + PL+  VP     ++
Sbjct: 184 -----AKNGIEKAQLDLANTAVLAPSDGVVTNLQL-EVGTMANTNMPLLTFVPTGS-LWV 236

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            A    K + +V K + A V F        
Sbjct: 237 AADFREKSVANVDKTFHALVTFDANPGSVY 266



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 72/200 (36%), Gaps = 10/200 (5%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M  + K  H   ++ + +L I+  + +I      P+       G ++      ++    S
Sbjct: 1   MTADQKFKHW--MRTLIVLFIVLFLYIIIADRHAPLTTEGRVQGYVV------QVAPEVS 52

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    +EN   + +G  L T +D +    ++  ++S+++      T  S  +      
Sbjct: 53  GKVTDVLIENNQSVQKGDVLFTIDDRKYKIALEQAELSLQSAYEKEATLYSQREAALANI 112

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +  F++   +    L    S    +    + + +   ++    +++   N   +E +
Sbjct: 113 ARAQATFDNAHREYTRLLT--LSKQKVISQSTLDNAFAQNQVSRAALKAERQNLKVIEAQ 170

Query: 185 SSLLRALLSSHQKDLTMMKN 204
               +   ++ +     ++ 
Sbjct: 171 LGDQKGQSTAVRIAKNGIEK 190


>gi|22125378|ref|NP_668801.1| efflux protein [Yersinia pestis KIM 10]
 gi|45442401|ref|NP_993940.1| HlyD family secretion protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51597039|ref|YP_071230.1| HlyD family secretion protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108808183|ref|YP_652099.1| HlyD family secretion protein [Yersinia pestis Antiqua]
 gi|108811546|ref|YP_647313.1| HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|145599383|ref|YP_001163459.1| HlyD family secretion protein [Yersinia pestis Pestoides F]
 gi|149365136|ref|ZP_01887171.1| putative HlyD family secretion protein [Yersinia pestis CA88-4125]
 gi|162418511|ref|YP_001607147.1| RND efflux transporter [Yersinia pestis Angola]
 gi|165935968|ref|ZP_02224538.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011147|ref|ZP_02232045.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166212376|ref|ZP_02238411.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167398416|ref|ZP_02303940.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167422716|ref|ZP_02314469.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167470988|ref|ZP_02335692.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           FV-1]
 gi|218930048|ref|YP_002347923.1| putative HlyD family secretion protein [Yersinia pestis CO92]
 gi|229838591|ref|ZP_04458750.1| putative HlyD family secretion protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229895659|ref|ZP_04510830.1| putative HlyD family secretion protein [Yersinia pestis Pestoides
           A]
 gi|229899157|ref|ZP_04514300.1| putative HlyD family secretion protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229901815|ref|ZP_04516937.1| putative HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|270490005|ref|ZP_06207079.1| efflux transporter, RND family, MFP subunit [Yersinia pestis KIM
           D27]
 gi|294504752|ref|YP_003568814.1| putative HlyD family secretion protein [Yersinia pestis Z176003]
 gi|21958262|gb|AAM85052.1|AE013751_4 putative membrane protein, possible efflux component [Yersinia
           pestis KIM 10]
 gi|45437266|gb|AAS62817.1| putative HlyD family secretion protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51590321|emb|CAH21958.1| putative HlyD family (ABC efflux pump associated) secretion protein
           [Yersinia pseudotuberculosis IP 32953]
 gi|108775194|gb|ABG17713.1| HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|108780096|gb|ABG14154.1| putative HlyD family secretion protein [Yersinia pestis Antiqua]
 gi|115348659|emb|CAL21603.1| putative HlyD family secretion protein [Yersinia pestis CO92]
 gi|145211079|gb|ABP40486.1| HlyD family secretion protein [Yersinia pestis Pestoides F]
 gi|149291549|gb|EDM41623.1| putative HlyD family secretion protein [Yersinia pestis CA88-4125]
 gi|162351326|gb|ABX85274.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           Angola]
 gi|165916113|gb|EDR34720.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165989825|gb|EDR42126.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166206307|gb|EDR50787.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166958423|gb|EDR55444.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050920|gb|EDR62328.1| efflux ABC transporter, RND family, MFP subunit [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|229681744|gb|EEO77838.1| putative HlyD family secretion protein [Yersinia pestis Nepal516]
 gi|229687559|gb|EEO79632.1| putative HlyD family secretion protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229694957|gb|EEO85004.1| putative HlyD family secretion protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229701465|gb|EEO89493.1| putative HlyD family secretion protein [Yersinia pestis Pestoides
           A]
 gi|262362814|gb|ACY59535.1| putative HlyD family secretion protein [Yersinia pestis D106004]
 gi|262366738|gb|ACY63295.1| putative HlyD family secretion protein [Yersinia pestis D182038]
 gi|270338509|gb|EFA49286.1| efflux transporter, RND family, MFP subunit [Yersinia pestis KIM
           D27]
 gi|294355211|gb|ADE65552.1| putative HlyD family secretion protein [Yersinia pestis Z176003]
 gi|320014445|gb|ADV98016.1| putative HlyD family secretion protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 401

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 79/256 (30%), Gaps = 28/256 (10%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              S  ++AL  +  + +   + + E  +   QN L   E  +     +    I  QKN 
Sbjct: 68  AQVSGQIKALHVTLGQQVEKNQLVAEIDDLAQQNALKDAEEALKNVQAQRAAKIATQKNN 127

Query: 241 LR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE-------KTREQKT 291
                  +      +        I   LE  Q   +   +++   E              
Sbjct: 128 QLTYQRQQQILAKGVGVRADFDSIKATLEATQAEISALDAQIAQAEIAVSTAKLNLGYTK 187

Query: 292 ILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA- 348
           I SPIAGT+V             Q +  ++K V       + A+++   +  VK G    
Sbjct: 188 ISSPIAGTVVAIPVEEGQTVNAVQSAPTIIK-VAQLDTMTVEAQISEADVVKVKTGMPVY 246

Query: 349 -------TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--YYEVILKITDLAFS 399
                    RF       E    +I ++     S   ++  +    YY  +  + +   +
Sbjct: 247 FTILGEPEKRFSATLRAIEPAPDSINDETTTTSSSTSSSSSSSTAIYYNGLFDVANPTGA 306

Query: 400 DNNIELRNGFPAEVLF 415
                LR    A+V  
Sbjct: 307 -----LRISMTAQVYI 317



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 17/153 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V + G I  +  V  + +  SG IK   V  G Q+ +   +   +D+   + +   
Sbjct: 48  LEQTVLADGTIKAQKQV-TVGAQVSGQIKALHVTLGQQVEKNQLVAEIDDLAQQNALKDA 106

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++KN++                     K    +  QL     +              S
Sbjct: 107 EEALKNVQAQRAA----------------KIATQKNNQLTYQRQQQILAKGVGVRADFDS 150

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +  +L+     + ++       E   S  +  L
Sbjct: 151 IKATLEATQAEISALDAQIAQAEIAVSTAKLNL 183


>gi|330999586|ref|ZP_08323297.1| auxiliary transport protein, membrane fusion protein family protein
           [Parasutterella excrementihominis YIT 11859]
 gi|329574439|gb|EGG56009.1| auxiliary transport protein, membrane fusion protein family protein
           [Parasutterella excrementihominis YIT 11859]
          Length = 350

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 54/416 (12%), Positives = 116/416 (27%), Gaps = 96/416 (23%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW----SILLPIEISVSSSGEILNEDNVVEIKSP 62
           +  +   P     + L+ ++G+   I W    +   P   +    G++  E   + + S 
Sbjct: 17  QKQEVKAPKISVILMLVFVLGLTAFIVWGIYKAAFPP---APPLQGQM--ESRTISVASK 71

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
             G I K  V  G  +    P+                 S+  L   +   ++       
Sbjct: 72  VPGRIHKVLVSEGDFVKANQPVALM--------------SLPELEAKLQQVQAQERAAQA 117

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           K  ++++    +E+Q                                             
Sbjct: 118 KQSLVDEGARPQEKQAA------------------------------------------R 135

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
            +    +A  +   K    +  L++   VS+   ++ +     +                
Sbjct: 136 AQWERAQAAAALALKTYNRISALYKDGLVSKQKYDEVQTQWIAAK-----------QQAD 184

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
              ++YD A +      K  + DL +  +    ++  LT+       KT+ +P+   +  
Sbjct: 185 AAKQMYDIAEIGARKQEKSAAFDLAEEAKAGVKQVESLTV------DKTLNAPLDAQVDK 238

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLT----YIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
                    A    P++ +V  +            +   +I  V     A V  P   D 
Sbjct: 239 VILV-EGEIAAAGFPVVTLVDLNDQWASFNIREENMPGIEIGKV---LHAYV--PALGD- 291

Query: 359 REKKFKAIIEKIDPIISQQD-NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             KK    +  I P  +     + +    Y++          +    LR G    V
Sbjct: 292 --KKIDYKVYYISPRANYATWRSTRMDSGYDMKTFEVRGRPVEKIDHLRPGMSVLV 345


>gi|325204673|gb|ADZ00127.1| membrane fusion protein MtrC [Neisseria meningitidis M01-240355]
          Length = 412

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 2/170 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GII+K   + GS +  G PL   +       ++  +  +   +  +   K+  D
Sbjct: 75  VRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEASLESARAQLATAQATLA--KADAD 132

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  V   A   +E        +      K     I S   SL              
Sbjct: 133 LARYKPLVAADAISKQEYDAAVTAKRSAEAGVKAAQAAIKSAGISLNRSRITAPISGFIG 192

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               ++ +LL A  ++    +     ++     S +++ +  R + +  L
Sbjct: 193 QSKVSEGTLLNAGDATVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKL 242


>gi|318606294|emb|CBY27792.1| macrolide-specific efflux protein MacA [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 370

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 92/293 (31%), Gaps = 19/293 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++         Q              V   G     R + +       +    +++ ++ 
Sbjct: 24  IIRHLMAPTPVQFQTVKVANRDLQQNVLATGKLDAVRKVDVGAQVSGQLEKLYVEIGDQV 83

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              + L     +         E    +  DLN Q     K+ L+L      ++  L  + 
Sbjct: 84  KQGQLLAMIDPQQAQNQIKEVE---ATLQDLNAQLGQ-AKAELQLAAVTLRRQQDLAKLQ 139

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            +  +   + +  L      +E          + L       +   I +P+ G +V   +
Sbjct: 140 AVSRQDLDQASTALAVKKAQVETINAQINKTKASLDTANINLDYTKISAPMDGDVVQITT 199

Query: 306 FSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                     Q   ++ +        + A+V+   + H+K G  A+  F    D  EK+F
Sbjct: 200 LQGQTVIAAQQAPNILTLA-DMSTMLVNAQVSEADVIHLKPGMKAS--FTVLGD-PEKRF 255

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             +++ I P   + ++ +    +Y    ++ +       + L+    A+V   
Sbjct: 256 DGVLKDIQPTPEKVNDAI----FYSARFEVPNPDRL---LRLQ--MTAQVSIQ 299



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 55/133 (41%), Gaps = 6/133 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ +V ++G++     V ++ +  SG ++K  VE G Q+ QG  L   +  +  + I   
Sbjct: 46  LQQNVLATGKLDAVRKV-DVGAQVSGQLEKLYVEIGDQVKQGQLLAMIDPQQAQNQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDF----LNNKYDVLEKAFESREE-QLLDFLGKYHSTCSKVFN 154
           + ++++L   +   K+ L      L  + D+ +    SR++               +  N
Sbjct: 105 EATLQDLNAQLGQAKAELQLAAVTLRRQQDLAKLQAVSRQDLDQASTALAVKKAQVETIN 164

Query: 155 YGISSVYRSLKMK 167
             I+    SL   
Sbjct: 165 AQINKTKASLDTA 177


>gi|239501861|ref|ZP_04661171.1| membrane-fusion protein [Acinetobacter baumannii AB900]
          Length = 340

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 109/350 (31%), Gaps = 37/350 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSIL--LPIEISVSSS-GEILNEDNVVEIKSPF-SGIIKKFQV 72
           +  +  +  +  IG   W       ++ +V +  G +          +   SG I+K  V
Sbjct: 6   IAGILAVIAVVAIGFWVWGYNHKKQLDNNVLTLYGNVDI---RQVSLAFEQSGRIQKLLV 62

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G ++  G  L T             +  +K  +  I         +  +     +   
Sbjct: 63  QEGDKVQAGQVLATLNTNALQIQAKQAQAQLKAQQEAI---------VKQEVGARPEEIT 113

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             + QL     +   T   +    +  +  S   +    + +   + +  +  + +R   
Sbjct: 114 QAKAQLASAQAELDKTNKNL--QRLQILVSSTDGRAISQQELDYAKSNQHSADAAVRERQ 171

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK---STLELRENIHEQKNMLRHINELYD 249
           ++ +  +   +    +   +Q ++ +    +     +  ELR  ++    +   + E+ D
Sbjct: 172 ANLELLIKGARKEDREATRAQYEVTKANLDLINYNLTQAELRSPVNAV--VRARLQEVGD 229

Query: 250 EANLEFANY-LKEISRDLEQNQRTFADEMS-KLTILEKTREQKTILSPIAGTIVYNQS-- 305
               + A Y L   +    +      D  S K+    +         P+ G I Y  S  
Sbjct: 230 MTTAQKAVYTLALTNPKWIRVYVNEQDLSSIKMGSTAQIIRDAYPNQPMNGKIGYISSVA 289

Query: 306 -FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFP 353
            F+      Q++ +              +V        +K G   TV+ P
Sbjct: 290 EFTPKTV--QTEEI------RTTLVYEVRVYVHDPNDQLKMGQPVTVKVP 331



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 85/241 (35%), Gaps = 25/241 (10%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTLELRE 232
                 + + +  +A L    K+L  ++ L       A+SQ +L+  +   + +   +RE
Sbjct: 110 EEITQAKAQLASAQAELDKTNKNLQRLQILVSSTDGRAISQQELDYAKSNQHSADAAVRE 169

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                + +++   +   EA                  +  +    + L ++     Q  +
Sbjct: 170 RQANLELLIKGARKEDREA-----------------TRAQYEVTKANLDLINYNLTQAEL 212

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+   +V  +     +    +Q  +  +  +   +IR  V  + +  +K G TA +  
Sbjct: 213 RSPVNA-VVRARLQEVGD-MTTAQKAVYTLALTNPKWIRVYVNEQDLSSIKMGSTAQIIR 270

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             Y +         I  I  +       +QT+E    ++    +   D N +L+ G P  
Sbjct: 271 DAYPNQ---PMNGKIGYISSVAEFTPKTVQTEEIRTTLVYEVRVYVHDPNDQLKMGQPVT 327

Query: 413 V 413
           V
Sbjct: 328 V 328


>gi|237732134|ref|ZP_04562615.1| macrolide transporter subunit MacA [Citrobacter sp. 30_2]
 gi|226907673|gb|EEH93591.1| macrolide transporter subunit MacA [Citrobacter sp. 30_2]
          Length = 371

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 65/202 (32%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R+  ++  +L      ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRLQAEAEWKLARVTLSRQQQLAKTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+  G  A   F    D +  +++  ++     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLHPGQKAW--FTVLGDPQT-RYEGKLK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
               +   I LR    A+V   
Sbjct: 283 ----NPKGI-LRLDMTAQVHIQ 299



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 60/175 (34%), Gaps = 8/175 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAQNQIKEV 104

Query: 100 KVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FN 154
           + ++  LR      + E        ++   L K     ++ L     +     +++   +
Sbjct: 105 EATLMELRAQRLQAEAEWKLARVTLSRQQQLAKTQAVSQQDLDTAATEMAVKQAQIGTID 164

Query: 155 YGISSVYRSLKMKLTRMR--SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             I     SL    T +    I         + + L+       +    +  L +
Sbjct: 165 AQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLAD 219


>gi|226944955|ref|YP_002800028.1| HlyD family secretion protein [Azotobacter vinelandii DJ]
 gi|226719882|gb|ACO79053.1| secretion protein, HlyD family [Azotobacter vinelandii DJ]
          Length = 441

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/228 (11%), Positives = 78/228 (34%), Gaps = 6/228 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +    N V ++S   G + K     G Q+  G  L   +       +   + +++ 
Sbjct: 102 ALGTVTAY-NTVNVRSRVDGELIKVLFREGQQVKAGDLLAVIDPRLYQAALKQAEGTLQQ 160

Query: 106 LRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            R  +   + + +    L  +  V ++  +++E  +  + G   S  + V    ++  Y 
Sbjct: 161 NRAQLRNAEIDLARYKTLYAEDSVAKQTLDTQEALVAQYQGTVRSNLAAVEEAKVNLEYT 220

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            ++  +     +    +     S     L++  Q     +     +  + Q  + +Q + 
Sbjct: 221 QVRSPIAGRLGLRQVDVGNLVTSGDTTPLVTITQTLPISVSFTLPEGELPQ--VLEQVQA 278

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                +E  +     +  +  +  L ++ +L       +   +  + +
Sbjct: 279 DQHLAVEAWDRSERNRLAVGELESLDNQIDLTTGTVRLKARFENAEQR 326



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 12/135 (8%)

Query: 198 DLTMMKNLFEKNA-VSQNDLNQQ------ERIVYKSTLELRENIHEQKNMLRHINELYDE 250
           D  ++K LF +   V   DL         +  + ++   L++N  + +N    +      
Sbjct: 119 DGELIKVLFREGQQVKAGDLLAVIDPRLYQAALKQAEGTLQQNRAQLRNAEIDLARYKTL 178

Query: 251 -ANLEFANYLKEISRDL-EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            A    A    +    L  Q Q T    ++ +   +   E   + SPIAG  +  +    
Sbjct: 179 YAEDSVAKQTLDTQEALVAQYQGTVRSNLAAVEEAKVNLEYTQVRSPIAGR-LGLRQVDV 237

Query: 309 SNYAQQSQ--PLMKI 321
            N        PL+ I
Sbjct: 238 GNLVTSGDTTPLVTI 252


>gi|152992989|ref|YP_001358710.1| efflux system, membrane fusion protein [Sulfurovum sp. NBC37-1]
 gi|151424850|dbj|BAF72353.1| efflux system, membrane fusion protein [Sulfurovum sp. NBC37-1]
          Length = 380

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 74/196 (37%), Gaps = 17/196 (8%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            LE     ++      +     +++L  + A++     + ER+  ++    +      K 
Sbjct: 96  QLEEAKISVKKATLELEASKEELQSLKAQKALALVTFRRYERLQKQAFAS-KAEYDRTKA 154

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L  I+      N        E+ R  +  +            LE+   + +I +P+ G 
Sbjct: 155 DLDVIDAQIKATNARIDAAKIEVDRAGKNVE-----------ALEEKFARFSIYAPVDGY 203

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           ++  ++  + + A  +QP++KIV   K  +++  +  +    VK    A +     A   
Sbjct: 204 VIDREAEVAQSVA-PTQPILKIV-DPKSVWVKTYIDERLSGTVKVEQKAKIVLRSQAYRN 261

Query: 360 EKKFKAIIEKIDPIIS 375
               + ++++I+P   
Sbjct: 262 Y---EGVVKRIEPQTD 274



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 54/139 (38%), Gaps = 5/139 (3%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +  +N+  I +   G I +   + G  + +G  L++ + ++    ++  K+S+K     +
Sbjct: 52  IGANNIYAITAQTGGKILQILTDKGQWVKKGEMLVSIDPVDLPKQLEEAKISVKKATLEL 111

Query: 111 DTEKSALDFLNNKYDVL---EKAFESREEQLLDFLGKYHSTCS--KVFNYGISSVYRSLK 165
           +  K  L  L  +  +     + +E  ++Q      +Y  T +   V +  I +    + 
Sbjct: 112 EASKEELQSLKAQKALALVTFRRYERLQKQAFASKAEYDRTKADLDVIDAQIKATNARID 171

Query: 166 MKLTRMRSIYLNRLDLENK 184
                +     N   LE K
Sbjct: 172 AAKIEVDRAGKNVEALEEK 190


>gi|152973218|ref|YP_001338364.1| paral putative membrane protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150958067|gb|ABR80097.1| paral putative membrane protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 355

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 69/207 (33%), Gaps = 7/207 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
                   + ++ ++    W +L P        SS+G I   +  V+I S  +G I    
Sbjct: 5   KKRWAGYFVGLLVVLAAAAWWLLRPPGLPAGFASSNGRIEATE--VDIASKIAGRIDTIL 62

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + QG  L   +     +        IK     +   ++ LD   ++    E   
Sbjct: 63  VKEGQFVHQGEVLARMDTRVLNEQRLEAAAQIKEAESAVLAARALLDQRQSEMRASEAVV 122

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           + R+ +L     ++    S   +   +   + L        S        + + S  RA 
Sbjct: 123 KQRQAELDSTAKRH--VRSNTLSQRGAVSAQQLDDDRAAAESARAALESAKAQVSAARAA 180

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           + + +  +   +   E +  ++  +  
Sbjct: 181 IEAARTSIIQAQTRVEASQATERRILA 207


>gi|170724920|ref|YP_001758946.1| RND family efflux transporter MFP subunit [Shewanella woodyi ATCC
           51908]
 gi|169810267|gb|ACA84851.1| efflux transporter, RND family, MFP subunit [Shewanella woodyi ATCC
           51908]
          Length = 433

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 56/153 (36%), Gaps = 9/153 (5%)

Query: 207 EKNAVSQNDLNQQER-------IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           +++ V   ++ Q +         V ++  +      E   + R        +    A   
Sbjct: 156 QRHVVPGQEVTQGQALLTLGGVAVAQAQADYINAAAEWSRVSRMSKSAVSASRRLQAQVD 215

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            E+ R + +  +  + ++++L           +L+PI G +  + +            LM
Sbjct: 216 AELKRAILEAMKMTSKQIAQLESNPSNIGSYQLLAPINGRVQQDLA-KLGQIVPAGTALM 274

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++       ++ A+VTP Q + V  G  A VR 
Sbjct: 275 QLT-DESHLWVEAQVTPAQSEKVSIGSVALVRV 306


>gi|254718473|ref|ZP_05180284.1| efflux transporter, RND family, MFP subunit [Brucella sp. 83/13]
 gi|265983439|ref|ZP_06096174.1| efflux transporter [Brucella sp. 83/13]
 gi|306838280|ref|ZP_07471126.1| efflux transporter, RND family, MFP subunit [Brucella sp. NF 2653]
 gi|264662031|gb|EEZ32292.1| efflux transporter [Brucella sp. 83/13]
 gi|306406571|gb|EFM62804.1| efflux transporter, RND family, MFP subunit [Brucella sp. NF 2653]
          Length = 383

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 54/193 (27%), Gaps = 27/193 (13%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-----------QRTFADEMSKLTI 282
           I E       I     E  L+ A   ++    L              +   A+    L  
Sbjct: 114 IAELDAETEQIAVAKAETALKDAQTTRQRIARLRATNTATEVQAVGAELAVANAQLALQD 173

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +    ++ + +PIAG +      +  NY      + +I        I   V  +    +
Sbjct: 174 AQLALSRRMVRAPIAGIVGILPVNA-GNYVTAQTSIARI-DDRSTVLIDIWVPERFAPQI 231

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G   T     +        K  I  +D ++ +    L       V  ++ +       
Sbjct: 232 KVGQPLTAESTAFPGEIY---KGRINAVDNMLDEASRTLH------VRAEVPNAED---- 278

Query: 403 IELRNGFPAEVLF 415
             LR G    V  
Sbjct: 279 -RLRAGMSFSVTI 290



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 3/105 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKS 115
           +    SG + K  V  G  + +G  +   +       +   + ++K+    R  I   ++
Sbjct: 89  VTPYSSGYMTKLHVRAGDTVKEGDLIAELDAETEQIAVAKAETALKDAQTTRQRIARLRA 148

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                  +    E A  + +  L D          +    GI  +
Sbjct: 149 TNTATEVQAVGAELAVANAQLALQDAQLALSRRMVRAPIAGIVGI 193


>gi|224071225|ref|XP_002194896.1| PREDICTED: CAP-GLY domain containing linker protein 1 isoform 1
            [Taeniopygia guttata]
          Length = 1438

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 69/198 (34%), Gaps = 6/198 (3%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  K+  + +   ++       D L  +  VL++ F S  ++  +       T  K+  
Sbjct: 813  ELQGKEQKLLDFEKNLSAVNQVKDSLEKELQVLKEKFTSAADEAENVQQAMQETVKKLNQ 872

Query: 155  YG-----ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                   +SS    LK  LT M      R + E +    +A L +   ++          
Sbjct: 873  KEEQFALMSSELEQLKSSLTEMEGKLREREEREQQLMEAKAKLENDIAEIMKSSGDSSAQ 932

Query: 210  AVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                ND  +  ER + +  LEL +   +   + +++ +   +A       LK    +L+ 
Sbjct: 933  LTRMNDELRLKERQLEQIQLELTKANEKAAQLEKNVEQTTQKAEQSQQETLKIHQAELKT 992

Query: 269  NQRTFADEMSKLTILEKT 286
             Q    D   ++   +  
Sbjct: 993  LQDQLTDMKKQIESSQHQ 1010



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 67/209 (32%), Gaps = 11/209 (5%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF----ESREEQLLDFLGKY 145
               + +  K+  I+ L    D E++ +    +    +E+      +  +  +L+   K 
Sbjct: 351 TALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKM 410

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               + V       V   L       R +   +  +E +S     L +  + +   +K L
Sbjct: 411 DQLRAMVEAADREKV-ELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKEL 469

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA-----NLEFANYLK 260
            +     +   ++ +R +  + +           + R +     E       L+ + ++ 
Sbjct: 470 EQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLDSSKHID 529

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQ 289
           ++   L    +  +    K+    K  + 
Sbjct: 530 DVDTSLS-LLQEISSLQEKMAAAGKEHQN 557


>gi|206562572|ref|YP_002233335.1| cobalt-zinc-cadmium resistance protein [Burkholderia cenocepacia
           J2315]
 gi|198038612|emb|CAR54572.1| cobalt-zinc-cadmium resistance protein [Burkholderia cenocepacia
           J2315]
          Length = 489

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/308 (11%), Positives = 93/308 (30%), Gaps = 31/308 (10%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K+  D  +  +   + A    + QL                     +   ++    R   
Sbjct: 135 KAGNDAASFPFARADGAIALTDAQLATSKIALAKAGPAQIATPF-QLPGEIRFNEDRTAH 193

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMM--KNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +      +  + S+      +  + L ++   +L ++    +++L   ER +  +     
Sbjct: 194 VVPRVAGIVEQVSVSLGQNVAKGQVLAVIASTDLADR----RSELLTAERRLSGA----- 244

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +E++  L       ++   +    L+E    ++  ++  A   + +        +  
Sbjct: 245 RATYERERTLWQERISAEQDYQQAQVQLREAEIAVQNARQKLAALNAPVGAGA--LNRYE 302

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P AGTIV   + +       +   M ++      +    V  +++  V+ G  ATV 
Sbjct: 303 LRAPFAGTIVEKHA-TPGEAI-AADASMFVISDLSTVWAEMAVPAQRLNDVRVGRDATVI 360

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              +              +  ++ +Q                  +   + +   R G   
Sbjct: 361 ATAFESRSSGPIA----YVGSLLGEQTRTA-----------PARVVLPNPDRVWRPGMFV 405

Query: 412 EVLFTAKN 419
            V   A  
Sbjct: 406 NVSVDAGK 413



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 3/101 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLN 121
           GI+++  V  G  + +G  L      +  D       + + L   R   + E++      
Sbjct: 200 GIVEQVSVSLGQNVAKGQVLAVIASTDLADRRSELLTAERRLSGARATYERERTLWQERI 259

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +     ++A     E  +          +     G  ++ R
Sbjct: 260 SAEQDYQQAQVQLREAEIAVQNARQKLAALNAPVGAGALNR 300


>gi|91791937|ref|YP_561588.1| secretion protein HlyD [Shewanella denitrificans OS217]
 gi|91713939|gb|ABE53865.1| Secretion protein HlyD [Shewanella denitrificans OS217]
          Length = 413

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 4/144 (2%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E   + R  N    ++    A    E+ R + ++ +    +++ L           +L+
Sbjct: 166 SEWDRVKRLSNGAISDSQRLQAQVNAELKRAILESLKMTKSQIATLATSPSAIGSYALLA 225

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P +G +  + +            LM++       ++ A+++P Q   V  G  A VR   
Sbjct: 226 PFSGRVQQDIAM-LGQVLAAGTALMQLT-DESSLWVEAQLSPAQADTVDIGTQALVRVE- 282

Query: 355 YADIREKKFKAIIEKIDPIISQQD 378
                + +      +ID I   + 
Sbjct: 283 -DKTLQGEIIGRSHEIDSITRTEQ 305


>gi|27367026|ref|NP_762553.1| membrane-fusion protein [Vibrio vulnificus CMCP6]
 gi|27358594|gb|AAO07543.1|AE016810_46 Membrane-fusion protein [Vibrio vulnificus CMCP6]
          Length = 316

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/355 (12%), Positives = 98/355 (27%), Gaps = 83/355 (23%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           II++  V+ G  + QG  L+  +      ++                E+S       K  
Sbjct: 43  IIRELPVKEGQMVSQGDVLVKLDSKNQQAVL-----------ARALAEQSKAQAYLLKLT 91

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             E+  +                                                 + + 
Sbjct: 92  NGERPED---------------------------------------------IASAQARV 106

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +   A L   QK       L  K  +SQ++ +        +  EL     E   +     
Sbjct: 107 ARAEAQLIEAQKTFKRKSELVAKKLISQSEKDTALAQRDSARAELDSANEEFSKLTAGSR 166

Query: 246 -ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E  ++A  + A    ++    +Q         ++  IL+          P++G +    
Sbjct: 167 PEDIEQAKAQLAATQADVVLQ-QQKLDELTIVATRDGILDNLPYNLGERVPVSGIV---- 221

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                   Q           +++ Y R  V      +   G   TV     +D ++   +
Sbjct: 222 -----AVIQA----------NRIPYARVYVPATYRVNFVPGKQVTVHVDGVSDPQQGTVR 266

Query: 365 AIIEKID-PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            +  +             +++  Y   + +T+ A +     L +G PA+V    +
Sbjct: 267 WVANEASFTPYYALTEEERSRLMYLAEVDLTEAARA-----LPSGVPAQVDLNGE 316


>gi|89094702|ref|ZP_01167638.1| hypothetical protein MED92_02424 [Oceanospirillum sp. MED92]
 gi|89081048|gb|EAR60284.1| hypothetical protein MED92_02424 [Oceanospirillum sp. MED92]
          Length = 1067

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 71/213 (33%), Gaps = 8/213 (3%)

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
           G  L     ++   L  L +      R   +     L+         E   E +  QLL 
Sbjct: 209 GQLLERELKLQNQYLNSLGEFKQVRQRAEAELALRELEKSA------EADSEVQAIQLLR 262

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD-L 199
              +  S   +     I S  +  + +  R+  +  +   +  +  L  + ++  Q   +
Sbjct: 263 KENQQLSQQLRALLVDIESYDQERRAEQIRLSQLTTSFNLIRQQLELEVSHITPAQIQFI 322

Query: 200 TMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +   +   VSQ     + +R   +  L +  +    +  +  +N+          + 
Sbjct: 323 FENRTAQDTRKVSQEIAQLRLQRAQLEQRLNVSGDKQATQEAMPSLNKAQLRRFQNLLDD 382

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            K++   L   Q   + +++++  +++   Q+ 
Sbjct: 383 QKQLLNQLSDAQSQLSLKLNQILNIQRQVNQQI 415


>gi|330859034|emb|CBX69392.1| multidrug resistance protein mdtN [Yersinia enterocolitica W22703]
          Length = 250

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 82/229 (35%), Gaps = 29/229 (12%)

Query: 163 SLKMKLTRMRSIYLNRLDLE---NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +   + T+ R++   + +      +    +A L    + L  ++ L  K  V+   ++  
Sbjct: 2   AEAARDTQQRTVVAEQSNAAITNEQIVRAQANLKLATQTLARLQPLLPKGYVTAQQVDDA 61

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
               + + + L++ + +       ++                       ++       + 
Sbjct: 62  ATAKHDAEVSLKQALKQSFAAEALVSST-------------------AASEALVVARRAA 102

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L I E+      I +P  G +V     S+  +    Q +  ++ +++  +  A     ++
Sbjct: 103 LAIAERELANTQIRAPHDGRVVGLTV-SAGEFVVPDQAIFTLI-NTEHWHASAFFRETEL 160

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD--NNLQTQEY 386
           +H+K G  ATV        R++  +  +E I   +S +D  N  +   Y
Sbjct: 161 KHIKVGDCATVYVMA---DRQRAIQGRVEGIGWGVSSEDMLNIPRGLPY 206


>gi|296102672|ref|YP_003612818.1| secretion protein HlyD family protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057131|gb|ADF61869.1| secretion protein HlyD family protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 286

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 66/218 (30%), Gaps = 32/218 (14%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           +   +  + K+  EL +  +E               +L+ AN       +++  Q     
Sbjct: 84  ILNAQAQLAKAQTELAKANNEATRRRHLSQNYISAEDLDTANI------NVKAMQANVNV 137

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI----R 331
             + L   +    Q  + +P+ G +    +    NYA   QP+  +V       +     
Sbjct: 138 AEATLKQAQWELTQTVVQAPVDGWVTNLSAR-VGNYATTGQPIFALVDSHSFYVVGYFEE 196

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            K+      H+++G  AT+          ++ +  +  I   I  Q     +    ++  
Sbjct: 197 TKLR-----HIREGAPATITL----YSGSQRLQGHVSSIGRAIYDQSVETDSGLVPDIKP 247

Query: 392 KIT------------DLAFSDNNIELRNGFPAEVLFTA 417
            +             +       + L +G    V    
Sbjct: 248 NVPWVRLAQRVPVRVEFDRLPQGLTLVSGTTCTVSIGT 285



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 46/159 (28%), Gaps = 4/159 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           +          + +L++  + G   W+  +      +  G+I  E   V I    SG I 
Sbjct: 1   MPLKTLKYFSTLFVLALALVAGWWLWNFYMQ--SPWTRDGKIRAEQ--VSITPQVSGSIT 56

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V++   + +G  L   +D      I   +  +   +  +    +      +      
Sbjct: 57  ALLVKDNQFVKKGDVLFRIDDTPYHIAILNAQAQLAKAQTELAKANNEATRRRHLSQNYI 116

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            A +     +     + +   ++              ++
Sbjct: 117 SAEDLDTANINVKAMQANVNVAEATLKQAQWELTQTVVQ 155


>gi|270262959|ref|ZP_06191230.1| hypothetical protein SOD_c05910 [Serratia odorifera 4Rx13]
 gi|270043643|gb|EFA16736.1| hypothetical protein SOD_c05910 [Serratia odorifera 4Rx13]
          Length = 398

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 66/242 (27%), Gaps = 13/242 (5%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           F  +K  +L     +     L F  +  +   +       +      +            
Sbjct: 4   FQRSKRYLLPTVIVAVIALFLYFRAQGTAETPRYITAVAQTRDLEQTVLADGTIEAQKQV 63

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
                 S  ++AL  +    +   + + E  +   QN L   E  +     +    +   
Sbjct: 64  SVGAQVSGQIKALRVALGDKVHKGQLVAEIDDLTQQNSLRDAEAALKNVQAQRASKLAAL 123

Query: 238 KNMLRHINELYD--------EANLEFANYLKEI-SRDLEQNQRTFADEMSKLTILEKTRE 288
           +N                  +A+ + A    E    D+             +   +    
Sbjct: 124 RNNQLAYQRQQAIVARGVGVQADFDSAKATLEATRADINALDAQIVQAQIAVNTAQVNLG 183

Query: 289 QKTILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
              I SPI GTIV             Q +  L+K V       I A+++   +  VK G 
Sbjct: 184 YTKITSPIDGTIVALPVEEGQTVNAVQSAPTLVK-VARLDTMTIEAQISEADVVKVKTGM 242

Query: 347 TA 348
             
Sbjct: 243 PV 244



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 62/144 (43%), Gaps = 11/144 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V + G I  +  V  + +  SG IK  +V  G ++ +G  +   +D+   + +   
Sbjct: 47  LEQTVLADGTIEAQKQV-SVGAQVSGQIKALRVALGDKVHKGQLVAEIDDLTQQNSLRDA 105

Query: 100 KVSIKNLRCHIDTEKSAL----------DFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           + ++KN++    ++ +AL            +  +   ++  F+S +  L       ++  
Sbjct: 106 EAALKNVQAQRASKLAALRNNQLAYQRQQAIVARGVGVQADFDSAKATLEATRADINALD 165

Query: 150 SKVFNYGISSVYRSLKMKLTRMRS 173
           +++    I+     + +  T++ S
Sbjct: 166 AQIVQAQIAVNTAQVNLGYTKITS 189


>gi|255014384|ref|ZP_05286510.1| ABC transporter permease [Bacteroides sp. 2_1_7]
          Length = 414

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 60/407 (14%), Positives = 119/407 (29%), Gaps = 107/407 (26%)

Query: 20  MTLLSIIGIIGLITWS------ILLPIEISVS-----SSGEILNEDNVVEIKSPFSGIIK 68
           + ++ I G+IG +  S      +   ++  V      +SG+++       I SP +  I 
Sbjct: 27  IAVVLIGGVIGFMQTSLQRKDLVFSTVDKGVIEVSVSASGKVVPAFE-EIINSPINSRIV 85

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +   + G  +  GTP+L  + +        +    +  R  +D  +              
Sbjct: 86  EIYKKGGDSVDVGTPILKLDLLSAETDYKKQLDEEQMKRLQLDQLR-------------- 131

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                                            ++          + ++R++L  K   L
Sbjct: 132 --------------------------------IQNRNKLSEMEMQLKVSRMELNRKEVEL 159

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R             + L    A + + + Q E     S L+L+E+  + +N     +  Y
Sbjct: 160 RNE-----------RYLDSLGAGTTDKVRQVELDYNVSVLKLKEDEQKYENEKSLTDADY 208

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
               L+   + K     L + +RT  D                I SP    + Y      
Sbjct: 209 KVKELDLNIFRK----SLAETKRTLED--------------AQIRSPRKAILTYVN-NEV 249

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
                Q   +  IV       I  ++       +  G  A V+          K   ++ 
Sbjct: 250 GAQVSQGSRVA-IVSDLSHFKIEGEIADTYGDRIAAGSKAVVKI------GNDKLDGVVS 302

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            + P+                ++  T     DN+  LR+G   +V  
Sbjct: 303 DVTPLSKNG------------VISFTVQLEEDNHRRLRSGLKTDVYV 337


>gi|153827966|ref|ZP_01980633.1| HlyD family secretion protein [Vibrio cholerae 623-39]
 gi|148876547|gb|EDL74682.1| HlyD family secretion protein [Vibrio cholerae 623-39]
          Length = 364

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 55/167 (32%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L + +  +    ++  ++ +KN        K+  D     
Sbjct: 77  SGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFDKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       G+ S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +    +          +   + + E +A+     + + R     
Sbjct: 197 DLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQ 243



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 76/230 (33%), Gaps = 40/230 (17%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + +    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 90  QVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFDKTQAISKAELDKVTNRYD 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I +P  G I      + +   Q +Q +M I+       +  ++
Sbjct: 150 LAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQV-QANQVIM-ILQDLNDLEVAIEI 207

Query: 335 T----------PKQIQHVK--KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                       + I  +         ++   Y                   +Q  ++ Q
Sbjct: 208 PHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTY------------------STQPSSDSQ 249

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH-PIT 431
           T   Y V+L   DL        +  G  A+V+  A N T    +I  P+T
Sbjct: 250 T---YSVVLGFEDL----KGFRVMPGMSAKVIPVADNPTAENTLITLPLT 292


>gi|145298287|ref|YP_001141128.1| HlyD family secretion protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142851059|gb|ABO89380.1| HlyD family secretion protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 353

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 78/238 (32%), Gaps = 21/238 (8%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +S+    + L +K +  R+++ S +    ++K         +           K   EL 
Sbjct: 49  QSLAEPSIKLVSKLAANRSVVISPEVTGRIVKIAVRSGQQVKQGDTLIALDAGKQQAELA 108

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E     ++  R + ++                 +LE  + T A   +++         +T
Sbjct: 109 EQSASARDEARKLRDMR-----RLVARGAVTQSELEGQEATVAQVQARVDAARYELSLRT 163

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P  G++      S          L+ +        +   V  + +  ++ G   T  
Sbjct: 164 LQAPFDGSV-SLIDLSEGALVNSGDTLLHL-DELARLRLDLAVPERYLSLLRPGMAVTAT 221

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              + D     F  ++E +D  +S    N+      +  + I      + + +LR G 
Sbjct: 222 SSAWPDQ---SFHGVLETLDSRVSNDTQNI------KARVIIP-----NPDGQLRPGM 265



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 59/154 (38%), Gaps = 8/154 (5%)

Query: 55  NVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
           N   + SP  +G I K  V +G Q+ QG  L+  +  +    +  +  S ++    +   
Sbjct: 65  NRSVVISPEVTGRIVKIAVRSGQQVKQGDTLIALDAGKQQAELAEQSASARDEARKLRDM 124

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +     L  +  V +   E +E  +     +  +   ++    + + +      +     
Sbjct: 125 RR----LVARGAVTQSELEGQEATVAQVQARVDAARYELSLRTLQAPFDGSVSLIDLSEG 180

Query: 174 IYLNRLDL---ENKSSLLRALLSSHQKDLTMMKN 204
             +N  D     ++ + LR  L+  ++ L++++ 
Sbjct: 181 ALVNSGDTLLHLDELARLRLDLAVPERYLSLLRP 214


>gi|115384720|ref|XP_001208907.1| hypothetical protein ATEG_01542 [Aspergillus terreus NIH2624]
 gi|114196599|gb|EAU38299.1| hypothetical protein ATEG_01542 [Aspergillus terreus NIH2624]
          Length = 1229

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/210 (10%), Positives = 68/210 (32%), Gaps = 9/210 (4%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD---------FLG 143
             +ID ++  + +++  + + +     L  +   LE      +  L +           G
Sbjct: 692 RQIIDDQRTELLSIKEELRSARRTETSLKERIQGLEDEIVVLQASLDEEKEIARGRVQRG 751

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             H    +        +   L      +  +  +  +LE +   L++ L   Q  +    
Sbjct: 752 SDHDNQVQKLLTEKQKLRDQLANAHVELHDLRTSAAELEAERDELQSQLEQVQNQVDDTS 811

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
               +    +    + E  + +   E    +  ++++   +N   + A  E      E+ 
Sbjct: 812 RFDREKVELRKTTLRLEGELKRLKDEKSTLLEAKESLENQLNSEIERATAEENRLSAEVD 871

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +  ++ Q +      +LT+ +   ++    
Sbjct: 872 QLQDKLQASAGGRDRELTLSKSKLQRYERR 901



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 73/219 (33%), Gaps = 13/219 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
              ++ T   D +KV ++     ++ E   L    +     +++ E++    ++      +
Sbjct: 805  NQVDDTSRFDREKVELRKTTLRLEGELKRLKDEKSTLLEAKESLENQLNSEIERATAEEN 864

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH----------QK 197
              S   +     +  S   +   +          E +   L ALL               
Sbjct: 865  RLSAEVDQLQDKLQASAGGRDRELTLSKSKLQRYERRIQELEALLEQQPLADTDHVSTNA 924

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            DL+++++  ++    +  L Q+E     S    +  I E +  L        E     ++
Sbjct: 925  DLSLLRHNLDEAKKREKVLLQREAEQKSSVRNYKSRIAELERELHDALMKKFETRSPQSS 984

Query: 258  YLKEISRDLEQNQRTFADEMSKLTILE---KTREQKTIL 293
               ++  +L   ++  ++    L  L+   +  E+  + 
Sbjct: 985  PSDKLHEELRSLRKQLSEAHRALRDLKTKNRDLERAAMR 1023



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 71/230 (30%), Gaps = 23/230 (10%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHI--------DTEKSALDFLNNKYDVLEKAFESREE 136
           L  + ++        ++++++ R              +  ++ L  + + L+   E +E 
Sbjct: 549 LQQDLVKAQARARELQLALEDERQRALDDADSIRTQYREEIERLQEEIESLQHEIEDKEG 608

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           Q          +  +   +               +  +      L  K S L+ ++ S +
Sbjct: 609 Q-FALEQDRWESAKRTLQHQKDRAEDQAAGFKRTIEKLEQVEHTLTGKESKLQEVIDSEK 667

Query: 197 KDL--------TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                        +K L ++ A  +  ++ Q   +     ELR     + ++   I  L 
Sbjct: 668 ARHFNSEAVLSRQVKELNDELASKRQIIDDQRTELLSIKEELRSARRTETSLKERIQGLE 727

Query: 249 DEANLEFANYLKEISRDLEQNQR------TFADEMSKLTILEKTREQKTI 292
           DE  +  A+  +E      + QR           +++   L        +
Sbjct: 728 DEIVVLQASLDEEKEIARGRVQRGSDHDNQVQKLLTEKQKLRDQLANAHV 777


>gi|94310729|ref|YP_583939.1| secretion protein HlyD [Cupriavidus metallidurans CH34]
 gi|93354581|gb|ABF08670.1| Efflux transporter, RND family, MFP subunit [Cupriavidus
           metallidurans CH34]
          Length = 402

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 71/218 (32%), Gaps = 25/218 (11%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYL 259
           +++    A ++  +   E  +     ELR+   N+   K +L        + + + A Y 
Sbjct: 114 RDVEASAAQARAQVQVAEANLALQQAELRDADVNLRRSKELLAPAAISQQQYDSDLARY- 172

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ----S 315
            +    +  ++ +     +     E   EQ  + +P  G ++   +    +        +
Sbjct: 173 NKARASISNSEASITSAKANARAAEVAVEQTVVRAPFDGVVLIKHAN-VGDNITPFSAAA 231

Query: 316 QPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
                IV  +      + A V    I  +       V      ++R+   +  + +I P 
Sbjct: 232 DTKGAIVTIADMSTLEVEADVAESNIAKITVEQPCEVLLDALPNLRQ---EGRVSRIVPT 288

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           + +            V++KI    F D +  +     A
Sbjct: 289 VDRSKAT--------VLVKI---RFVDRDPRVLPDMSA 315



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/129 (10%), Positives = 45/129 (34%), Gaps = 4/129 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           ++G ++ +     + S   G ++   V  GS++ +   +   E  +        +  ++ 
Sbjct: 71  ATGYVVPQRKA-AVASKAQGRLEWLGVLEGSRVKKDEIIARIESRDVEASAAQARAQVQV 129

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESR---EEQLLDFLGKYHSTCSKVFNYGISSVYR 162
              ++  +++ L   +      ++        ++Q    L +Y+   + + N   S    
Sbjct: 130 AEANLALQQAELRDADVNLRRSKELLAPAAISQQQYDSDLARYNKARASISNSEASITSA 189

Query: 163 SLKMKLTRM 171
               +   +
Sbjct: 190 KANARAAEV 198


>gi|317140517|ref|XP_001818234.2| spindle-pole body protein (Pcp1) [Aspergillus oryzae RIB40]
          Length = 1207

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 67/211 (31%), Gaps = 10/211 (4%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL---------- 142
             +ID ++  + +++  +   K     L  K   LE      +  L +            
Sbjct: 690 RQIIDDQRTELLSVKEELRLAKREEAALTEKVQALEDEVVVLQANLEEEREYAKGRMQKG 749

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
              H    +        +   L      +  +  +  DLE +   L+A L   Q  +   
Sbjct: 750 SSDHDNRLQNLISEKQKLRDQLANAHVELHDLRTSVADLEAERDELQAQLDQAQHQVDDT 809

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
               ++    +    + E  + +   E    +  ++ + + ++   + A +E      EI
Sbjct: 810 TKFDKEKVELRKSTLRLEGELKRLREEKSSLVEAKEALEKQLSSEVERATIEENRLAVEI 869

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            +  ++ Q T      +LT  +   ++    
Sbjct: 870 DQLQDKLQATSGVRDRELTSAKSKNQRLERR 900



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 71/215 (33%), Gaps = 9/215 (4%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  +        + S   L   +   +     L    + LEK   S  E+      +   
Sbjct: 808  DTTKFDKEKVELRKSTLRLEGELKRLREEKSSLVEAKEALEKQLSSEVERATIEENRLAV 867

Query: 148  TCSKV---FNYGISSVYRSLKMKLTRMRSIYLNRLDLEN---KSSLLRALLSSHQKDLTM 201
               ++            R L    ++ + +     +LE    +  L     S+   DL+M
Sbjct: 868  EIDQLQDKLQATSGVRDRELTSAKSKNQRLERRVQELEALLEQQPLGEQEHSTANADLSM 927

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +++  ++    +  L Q+E     S    +  I E +  L  I     E +   A+   +
Sbjct: 928  LRHNLDEARKREKTLLQREADQKASVRSCKSRIAELERELHDIMMRKFEDHSPHASPSDK 987

Query: 262  ISRDLEQNQRTFAD---EMSKLTILEKTREQKTIL 293
            +  +L   ++  ++    + +L    +  E+  + 
Sbjct: 988  LHEELRSLRKQLSEAHRTLRELKSKNRDLERAAMR 1022



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 73/246 (29%), Gaps = 27/246 (10%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G         +     E        +   + LR   D +   ++ L ++ + LE +  
Sbjct: 282 RRGQLDETSQREMDLMREELESKDQRVRELQEELRDAKDRQSEEIEKLRDEIEDLEASLR 341

Query: 133 SREEQLLDFL--------------GKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYL 176
            +E  + +                G      S++      +  +  SL    +  R   +
Sbjct: 342 EKERTIDERDEELEELKDKDSKENGALAELESELLRAREQMEELQDSLDQAKSEAREARV 401

Query: 177 N----RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +    + D E     L+ L           K L  +     + L ++ R + +    L+E
Sbjct: 402 SESRAKSDKEEAEKNLQELHDEMANKSISTKGLTRQLEEKSSKLEEELRTLQEQNSVLKE 461

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKE-------ISRDLEQNQRTFADEMSKLTILEK 285
            +  +     H+ E Y  A     +  ++           L   Q+      ++L     
Sbjct: 462 ELERKAQNEAHLEEQYRRAQQSMDDEGQKLHNDAALARHQLNIAQQERDALSAQLQEALD 521

Query: 286 TREQKT 291
             ++KT
Sbjct: 522 EIQRKT 527



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 75/242 (30%), Gaps = 28/242 (11%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++     L   +        D     ++     I  +    + L  ++  L      
Sbjct: 487 EGQKLHNDAALARHQLNIAQQERDALSAQLQEALDEIQRKTEEKELLQTRHYALTDESGG 546

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVY----------RSLKMKLTRMRSIYLNRLDLEN 183
            +++L     +       + +    ++             ++     + ++     D E 
Sbjct: 547 LQDELAQAQARIRELQHSINDTKEHALENADTIRTQYREEIERLQEEIEALNHEIEDKEG 606

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQKN 239
           + +L +    S ++ L + K+  E  A     +   L Q E  +     +L+E I  +K 
Sbjct: 607 QFALEQDRWESTKRALQLQKDRAEDQAAGFKRTIEKLEQVEHTLTGKESKLQEVIDSEKA 666

Query: 240 --------MLRHINELYDEANLEFA------NYLKEISRDLEQNQRTFADEMSKLTILEK 285
                   + R + EL DE   +          L  +  +L   +R  A    K+  LE 
Sbjct: 667 RHFNSEAVLSRQVKELNDELLSKRQIIDDQRTELLSVKEELRLAKREEAALTEKVQALED 726

Query: 286 TR 287
             
Sbjct: 727 EV 728



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 70/190 (36%), Gaps = 7/190 (3%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  I+ L+  I+     ++    ++ + +  +ES +  L           +  F   I  
Sbjct: 584 REEIERLQEEIEALNHEIEDKEGQFALEQDRWESTKRAL-QLQKDRAEDQAAGFKRTIEK 642

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +   ++  LT   S     +D E         + S Q     +K L ++    +  ++ Q
Sbjct: 643 L-EQVEHTLTGKESKLQEVIDSEKARHFNSEAVLSRQ-----VKELNDELLSKRQIIDDQ 696

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
              +     ELR    E+  +   +  L DE  +  AN  +E      + Q+  +D  ++
Sbjct: 697 RTELLSVKEELRLAKREEAALTEKVQALEDEVVVLQANLEEEREYAKGRMQKGSSDHDNR 756

Query: 280 LTILEKTREQ 289
           L  L   +++
Sbjct: 757 LQNLISEKQK 766



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 72/230 (31%), Gaps = 31/230 (13%)

Query: 91  ETTDLIDLKKVSIKNLRCHI------DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +    ++  +V  + LR  +      +T +  +D +  + +  ++     +E+L D   +
Sbjct: 262 QAERDLEAYRVQFQELREKLRRGQLDETSQREMDLMREELESKDQRVRELQEELRDAKDR 321

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR--------------LDLENKSSLLRA 190
             S   +     I  +  SL+ K   +                      +LE++    R 
Sbjct: 322 -QSEEIEKLRDEIEDLEASLREKERTIDERDEELEELKDKDSKENGALAELESELLRARE 380

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH----------EQKNM 240
            +   Q  L   K+   +  VS++     +    K+  EL + +            Q   
Sbjct: 381 QMEELQDSLDQAKSEAREARVSESRAKSDKEEAEKNLQELHDEMANKSISTKGLTRQLEE 440

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                E       E  + LKE      QN+    ++  +         QK
Sbjct: 441 KSSKLEEELRTLQEQNSVLKEELERKAQNEAHLEEQYRRAQQSMDDEGQK 490


>gi|317480111|ref|ZP_07939221.1| efflux transporter [Bacteroides sp. 4_1_36]
 gi|316903658|gb|EFV25502.1| efflux transporter [Bacteroides sp. 4_1_36]
          Length = 416

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 104/314 (33%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE-QLLDFLGKYHSTCSK 151
            D I + +V       ++D E      L  K +  E     R   +    L +  +    
Sbjct: 45  QDNIQIAEVKNGKFMEYVDVEGVIQPILTIKVNAREAGSVERIIGEEGSLLRQGDTILVM 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + S+         ++ +     +++E KS  L+        DL  ++  F     
Sbjct: 105 ENPDLLRSIEDQRDDWEKQLITYREKEIEMEQKSLNLQQQALQTDYDLNRLRKSFA---- 160

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
                  +E        + +  + E +   +  N      +L   + +  I +DL +N R
Sbjct: 161 -----LDKEEYRMGIKSKAQLEVSEDEYNYKVKNAHLQRESLRHDSAVTVIRKDLIRNDR 215

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  K     +      + +P+AG + + +  +        + + +I        + 
Sbjct: 216 ER--ERKKYERACERLGNLVVKAPVAGQLSFVKV-TPGQQVASGESIAEIK-VLDQYKVH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPIISQQ-DNNLQTQE 385
             ++   I  +  G  AT+ +    Y     K    + ++   +D + +    +N++  +
Sbjct: 272 TSLSEYYIDRIITGLPATINYQGRKYPLRITKVVPEVKDRTFDVDLVFTGDMPDNVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEEA 345


>gi|269960569|ref|ZP_06174941.1| hypothetical protein VME_13250 [Vibrio harveyi 1DA3]
 gi|269834646|gb|EEZ88733.1| hypothetical protein VME_13250 [Vibrio harveyi 1DA3]
          Length = 395

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 59/394 (14%), Positives = 126/394 (31%), Gaps = 42/394 (10%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P+ I V  +G +  +  +  I S   G +++  V+ G+ + +G  +    + E     +
Sbjct: 33  GPLAIEVRGNGILAPK-YIRWISSNVDGRVERVLVKPGAVVKEGDVIAEMVNPELAQKTE 91

Query: 98  LKKVSIKNLRCHIDTEKSAL--DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             +  ++    ++   K     + L+ +  VL KA  + E+  L +  +         + 
Sbjct: 92  EIRWELEAAHANLQALKMRHNNNVLDAQTKVL-KAKHNYEKAKLKYEAEKTLYKRANGSV 150

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                 RS        +S  + +  L    +   A   ++Q  L  +K    +N      
Sbjct: 151 SKIDFDRSRLDTEQFKQSWEIEKQRLATLKTTQEAEFVANQAMLNGLK----RNLDRSKY 206

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L     +V      ++    E    +   N +   A     + + E+     Q +    D
Sbjct: 207 LLDSLTVVANQNGVIQAVDIEAGQRIPVGNNIAKLAQQ--GDLIAELDIPERQVRDVALD 264

Query: 276 EMSKLTILEKTREQKTIL---SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           +   +       + +      + + GT+  + S +         P  ++ P      I+ 
Sbjct: 265 QAVTINTHNTIIDGQVARIDPAVVNGTVQVDVSLT-----SPLPP--EVRPD---LSIQG 314

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
            +    +       T  V  P YA          + KI P                  + 
Sbjct: 315 TIKVSNVN-----QTLFVARPSYAQNNAP---GSVFKISPDGLSAT-----------RVP 355

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEI 426
           +T    S +NIE+++G  A       NT     +
Sbjct: 356 VTFGLGSADNIEIKSGLSAADRIITSNTNAWSHL 389


>gi|195504934|ref|XP_002099292.1| GE23447 [Drosophila yakuba]
 gi|194185393|gb|EDW99004.1| GE23447 [Drosophila yakuba]
          Length = 2109

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 73/206 (35%), Gaps = 2/206 (0%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +       +  K  SI+ +   ++ +  AL  L ++   L+   +  +E+L         
Sbjct: 1689 DLTRLQMALQEKDCSIRQMAERLENQNRALTQLEDRCTALKTTVDQLKERLQKSAVSETQ 1748

Query: 148  TCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               ++      +S      +    +++ +  +    EN+  +L   L S Q +L  ++  
Sbjct: 1749 LRGELKTLQKELSEQGHCSQANEEKLKLVQKSLQTAENEKRILTERLDSAQTNLNELRRS 1808

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +        L +Q   +      L   +   K       +          N  +E+SR 
Sbjct: 1809 QQAQLDGNQRLQEQVTDLEVQRSALESQLRIAKWNQESGGDKGLTNGNGGGNGEEELSRQ 1868

Query: 266  LEQNQRTFADEMSKLTILEKTREQKT 291
            L+ +QR  ++  SKL  L+   +Q  
Sbjct: 1869 LKSSQREKSELRSKLQTLQDKVKQLE 1894



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 70/206 (33%), Gaps = 7/206 (3%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            +   +          ++   + L      E      + N     E+A +   E++L    
Sbjct: 989  VARLQKELEQCQRKAQETKTQLLNAARAAESDFNQKIANLQACAEEAAKRHGEEILQLRN 1048

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK--SSLLRALLSSHQKDLTM 201
                   +      ++    ++    R+ ++  +   L  +   +L+RA     Q  L  
Sbjct: 1049 ALEKRMQQALQALQTAKDDEIEKLQERLATLQAHLESLVQQHEEALIRAESEKQQALLIA 1108

Query: 202  MKN---LFEK-NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             ++   + E+  AVS++   +QE  + +S  E      +Q+  +  + +   +   +   
Sbjct: 1109 HRDKQAVAERLEAVSRDLKTEQE-SLDRSRREANARDEKQRAAIAQLKDEMVQMRTKEEE 1167

Query: 258  YLKEISRDLEQNQRTFADEMSKLTIL 283
            +  ++   + + +   +    +   L
Sbjct: 1168 HKIKLEECIRKQELQLSSLREERESL 1193



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 71/199 (35%), Gaps = 6/199 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--KVFN 154
            DL +  ++NL   +   +   D   ++    +K  +   EQ L    K     +  +   
Sbjct: 1530 DLVRKGVRNLMHQVAQLEREKDDYKSQLGAAKKQLQDAAEQQLRCDAKLGKLQAMLRNLQ 1589

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               S++    KMK++ ++++        ++  +LR  L+  +  L       E+N  ++ 
Sbjct: 1590 EEKSNLETDRKMKISAIQALEEKLKHRNDECQMLRERLAQTEMQLAAT---SEENGQNEE 1646

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             L +  +   K   E R+   E   +    ++L  +  +     L  +   L++   +  
Sbjct: 1647 RLEKSRQQCSKLDNEKRQLQEELAKVEGRASKLDLQ-RVAMEGDLTRLQMALQEKDCSIR 1705

Query: 275  DEMSKLTILEKTREQKTIL 293
                +L    +   Q    
Sbjct: 1706 QMAERLENQNRALTQLEDR 1724



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 78/223 (34%), Gaps = 19/223 (8%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L+  E  +   L+   +   + +   ++     L       D   +   +R+E+    + 
Sbjct: 1094 LIRAESEKQQALLIAHRDK-QAVAERLEAVSRDLKTEQESLDRSRREANARDEKQRAAIA 1152

Query: 144  KYHSTCSKVFNYGIS---SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            +      ++          +   ++ +  ++ S+   R  L   S  L+  +   +  + 
Sbjct: 1153 QLKDEMVQMRTKEEEHKIKLEECIRKQELQLSSLREERESLCRVSEELKMEIRLKEDKME 1212

Query: 201  MMKNLFE---------KNAVS--QNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINE 246
               N  +         +  +   + +L    R +  S +E      +  E ++ ++ +  
Sbjct: 1213 GTNNELQDALRKSKEGEGFIDSLRKELTDCRRQLADSNIERDKYSGSNKELRDHVKRVES 1272

Query: 247  LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               E        L++IS +LE  + +  +E ++L+ + K  E 
Sbjct: 1273 AKREQARAIEEALQKIS-NLEDTKNSLENERTRLSTILKETEN 1314



 Score = 37.3 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 74/213 (34%), Gaps = 13/213 (6%)

Query: 85   LTFEDIETTDLIDLKKVSIKNL-RCHIDTEKSALDF--------LNNKYDVLEKAFESRE 135
            L  + ++  + I   K  +  L +  ++ E   L          L  +  + + A  +R+
Sbjct: 810  LRIQSVDQCNEIGELKKELAILDKARLELETDNLSAGEKLKCLQLEKEKILQDLACVTRD 869

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
               +           +  N  +    + L+        +  N  ++       + ++  H
Sbjct: 870  RGDIHNQLTAMCRKKEALNEELMRTRQRLEQTTETNSRLNRNLEEMVKDVEEKQVVIDLH 929

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            +KD   +  L    A  +++    E +++ +   L      +  + R + E         
Sbjct: 930  EKDTHRLNELL---AALRSEKESLESVLFDTNTSLEATEERRSQLERDLQEALVR-EESL 985

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             N++  + ++LEQ QR   +  ++L    +  E
Sbjct: 986  KNHVARLQKELEQCQRKAQETKTQLLNAARAAE 1018


>gi|167839309|ref|ZP_02465993.1| hypothetical protein Bpse38_21719 [Burkholderia thailandensis
           MSMB43]
          Length = 521

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/326 (11%), Positives = 95/326 (29%), Gaps = 28/326 (8%)

Query: 2   HHFMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPI--EISVSSSGEILNEDNVVEI 59
           H       +R            +  G++  + W +L  +   +   SS   +  + V  +
Sbjct: 26  HDEPVARSRRTLRPFWTLAPRAAGYGVVFFVIWMVLTIMFPNVFTRSSERAVVNNEVTLV 85

Query: 60  KSPFSGIIKKFQVENGSQILQGTPLLTFE--DIETTDLIDLKKVSIKNLR----CHIDTE 113
            SP  G++ +  V  G       PL+T +  +I+   LIDL    + N +       +  
Sbjct: 86  TSPVEGVVTEQHVAAGKPFDANQPLMTVQNPNIDRALLIDLTGKKLDNQQREDAARAELA 145

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                  + ++D+L     +++E   +           V    +      +        +
Sbjct: 146 GDESQLASTQHDLLRYQSVAQKEHAANIRA--LEARLAVARAQVDQQEDVVNRNQAMQWA 203

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
             ++          L  L ++       +++       S++ +         ++L  R  
Sbjct: 204 GAVSEAYTSASRYQLSILSNAKAAAAAELEHAIANGDASRSKVYASATDGPAASLSQRGR 263

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +     + R           +F  Y + + + +   Q+                    I 
Sbjct: 264 LLGADIVQRRAE------ITQFDAYAQSVDKLIAAEQQRL-----------DRLSHIEIR 306

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLM 319
           S   G +    +    +       L+
Sbjct: 307 SGEPGVVEDVLA-PPGSRVAAGATLI 331


>gi|113954914|ref|YP_731697.1| RND family efflux transporter MFP subunit [Synechococcus sp.
           CC9311]
 gi|113882265|gb|ABI47223.1| efflux transporter, RND family, MFP subunit subfamily
           [Synechococcus sp. CC9311]
          Length = 379

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 5/171 (2%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VSQ D     +++       +     ++       ++  E     A       R  +  +
Sbjct: 73  VSQGDRIDAGQLLVVLDQVQQRAALAEQRAKAATAKVDWEREEFLAKAGAASLRQRDSYR 132

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
             +   + K+  LE       + SP AGT+   +     +   Q+QP   +V  + +   
Sbjct: 133 TRYVAAVEKVKALEAELSYSNLRSPTAGTVANVRV-KVGDVVNQNQPFTSVV-QNNILEA 190

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           + +V       +  G    +  P      +    + IE IDP ++ Q   L
Sbjct: 191 KVEVPAVYGDRLAIGQPIILSVPG---TVKPLATSQIESIDPQVNPQTQGL 238



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
            SG + + +V  G +I  G  L+  + ++    +  ++      +   + E+
Sbjct: 64  TSGRVTEIKVSQGDRIDAGQLLVVLDQVQQRAALAEQRAKAATAKVDWEREE 115


>gi|297304084|ref|XP_001084213.2| PREDICTED: chromosome-associated kinesin KIF4A [Macaca mulatta]
          Length = 1204

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 8/186 (4%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             + I+     ++K++ ++ +    + E+  L+    K DV +     R  + L  L   
Sbjct: 519 QLQPIQYQYQDNIKELELEVINLQKEKEELVLELQTAKKDVNQAKLSERRRKRLQELEGQ 578

Query: 146 HSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENK-SSLLRALLSSHQKD 198
            +   K  N          S  R++      +R +   R+ L  +            QK 
Sbjct: 579 IAELKKKLNEQSKLLKLKESTERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKK 638

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +  L E++   Q +L + ER   K +  LR    E     + + +   +   E A+ 
Sbjct: 639 DKEVIQLKERDRKRQYELLKLERNFQKQSNVLRRKTEEAAAANKRLKDALQKQR-EVADK 697

Query: 259 LKEISR 264
            KE   
Sbjct: 698 RKETQS 703



 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 26/234 (11%), Positives = 88/234 (37%), Gaps = 14/234 (5%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            VE   ++ +G      +  +  + I L + + + +   ++  +       +   ++E  
Sbjct: 365 LVEENEKLSRGLSEAAGQTAQMLERIILTEQANEKMNAKLEELRQHAACKLDLQKLVETL 424

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL----NRLDLENKSS 186
            +   ++ ++ +       +++ +  ++ +  ++   + +   +      NR      + 
Sbjct: 425 EDQELKENVEIICNLQQLITQLSDETVACMAAAIDTAVEQEAQVETSPETNRSSDTFTTQ 484

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                    ++ + + K L  K A+++  + Q +  +     + ++NI E +  + ++ +
Sbjct: 485 HALRQAQMSKELVELNKALALKEALAR-KMTQNDSQLQPIQYQYQDNIKELELEVINLQK 543

Query: 247 LYDEANLEFANYLKEI---------SRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  LE     K++          + L++ +   A+   KL    K  + K 
Sbjct: 544 EKEELVLELQTAKKDVNQAKLSERRRKRLQELEGQIAELKKKLNEQSKLLKLKE 597


>gi|296534027|ref|ZP_06896542.1| secretion protein HlyD [Roseomonas cervicalis ATCC 49957]
 gi|296265646|gb|EFH11756.1| secretion protein HlyD [Roseomonas cervicalis ATCC 49957]
          Length = 391

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 85/311 (27%), Gaps = 15/311 (4%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            ++     VL    E+    +L    +  +    +           L      +      
Sbjct: 66  AYVQGDIAVLSPRIEADVAAILVGDNQPVTAGQVLLRLDDRDARAQLAQAEAALAEAEAA 125

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
                   +     L+S Q  +   +    + A             + S     + +  Q
Sbjct: 126 ITTARESLTQTEEQLASAQAQIEQARAEQVRAAADARRAEALVGGGWSSRQNADQAVAAQ 185

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +     +     E  +     + + ++   Q         + L +   T     I +P  
Sbjct: 186 RKADAALRAAEAELVVRRQAIVVQRAQI-AQAAARRDQAAAALLLARNTLSYTEIRAPFD 244

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G IV N++     + +  Q L+ + P     Y+ A     Q+  ++ G  A +R      
Sbjct: 245 G-IVGNRAAQLGQHVRPGQQLIAVSPPPAALYVTANFKETQLSGMRPGQPAEIRVDA--- 300

Query: 358 IREKKFKAIIEKIDPIISQQ----DNNLQTQEYYE------VILKITDLAFSDNNIELRN 407
           I      A ++   P    Q         T  + +      V L +     ++    LR 
Sbjct: 301 IPGHALHARVDSFAPATGSQFSLLPPENATGNFTKIVQRVPVRLVLEPGQNAEAIARLRP 360

Query: 408 GFPAEVLFTAK 418
           G         +
Sbjct: 361 GLSVVAEIDTR 371



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/73 (12%), Positives = 24/73 (32%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V +   +  G  LL  +D +    +   + ++      I T + +L     +   
Sbjct: 83  VAAILVGDNQPVTAGQVLLRLDDRDARAQLAQAEAALAEAEAAITTARESLTQTEEQLAS 142

Query: 127 LEKAFESREEQLL 139
            +   E    + +
Sbjct: 143 AQAQIEQARAEQV 155


>gi|257125602|ref|YP_003163716.1| efflux transporter RND family, MFP subunit [Leptotrichia buccalis
           C-1013-b]
 gi|257049541|gb|ACV38725.1| efflux transporter, RND family, MFP subunit [Leptotrichia buccalis
           C-1013-b]
          Length = 448

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/287 (14%), Positives = 104/287 (36%), Gaps = 14/287 (4%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  I +SVS +G++   DN V + +  S  + K   + G  + +G  ++TF  ++  + +
Sbjct: 58  LGDISLSVSKTGQV-VSDNAVSVYTTASQRVSKVFFKEGDNVKKGDVVVTFYPVDKNETL 116

Query: 97  DLKKVSIKNLR--CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
              K+    ++       +         +   LE   +SR+    + L K         +
Sbjct: 117 RKIKMKTLEIKKYERNIADAKGSLRRKKESKSLEIQQKSRDLYNAEELYKVGGETRVNVD 176

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAV 211
               ++  S     T       +  D        +  L++ Q+DL ++K+         +
Sbjct: 177 DARKALRNSRIDLDTVDSEQKASIEDSRTALKTAKLELATLQEDLALIKDQITSPVDGVI 236

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++   ++  ++  ++TL     + + +NM   ++    +          EI+ D   +  
Sbjct: 237 TEMTADENYKVNTETTL---FKVSDSQNMRAEVSLSDTQVKNIEVGQRVEITSDALPDGE 293

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
               E+S+++ + K           + T+V      +    +    +
Sbjct: 294 KVEGEVSQISGVAKKSSSLD----ESDTVVKINLNETRG-LKPGATI 335


>gi|289208041|ref|YP_003460107.1| efflux transporter RND family, MFP subunit [Thioalkalivibrio sp.
           K90mix]
 gi|288943672|gb|ADC71371.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           K90mix]
          Length = 370

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 71/204 (34%), Gaps = 11/204 (5%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + + ++   +     +    + +   EL E   E       ++    E            
Sbjct: 77  QGIVDRIHFANGAFAEAGETLVELDTELDEAELESLRAEAQLSARELERARGLVQRNDIS 136

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
             + ++         + +   E    QK + +P  G  +  +  +   +     P++ ++
Sbjct: 137 DSEFQRRATEAQQAQAAVNAQEARIRQKRLRAPFDGQ-LGIRQVNEGQFVGPGDPIV-VL 194

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI---------IEKIDPI 373
                 Y+   +  +++ +V+ G +  V    Y +  E +  AI         + ++  +
Sbjct: 195 ESLDPLYVNFTLPERRLANVELGQSVEVTVDAYGETFEGQITAIEPRVRAASRMFRVQAM 254

Query: 374 ISQQDNNLQTQEYYEVILKITDLA 397
           I+ +D+ L+  ++  V L+  +  
Sbjct: 255 ITNEDHRLRPGQFARVTLQRGEPE 278



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/115 (12%), Positives = 40/115 (34%), Gaps = 10/115 (8%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---LN 121
           GI+ +    NG+    G  L+  +        +L +  +++LR         L+    L 
Sbjct: 78  GIVDRIHFANGAFAEAGETLVELDT-------ELDEAELESLRAEAQLSARELERARGLV 130

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
            + D+ +  F+ R  +        ++  +++    + + +             ++
Sbjct: 131 QRNDISDSEFQRRATEAQQAQAAVNAQEARIRQKRLRAPFDGQLGIRQVNEGQFV 185


>gi|156933331|ref|YP_001437247.1| multidrug efflux system subunit MdtA [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156531585|gb|ABU76411.1| hypothetical protein ESA_01144 [Cronobacter sakazakii ATCC BAA-894]
          Length = 415

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 44/133 (33%), Gaps = 4/133 (3%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   N V ++S   G +     + G Q+  G  L   +  +    +   +  +   R  +
Sbjct: 76  ITAANTVTVRSRVDGQLMAIHFKEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDRATL 135

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              +  L     +Y  L K      ++L         T   +     +     L++  +R
Sbjct: 136 ANARRDL----ARYQQLGKTNLVSRQELDAQQALVSETEGTLKADEAAVASAQLQLDWSR 191

Query: 171 MRSIYLNRLDLEN 183
           + +    R+ L+ 
Sbjct: 192 ITAPIDGRVGLKQ 204



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 56/179 (31%), Gaps = 7/179 (3%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLKEISRDLE 267
            +++ D +Q +  + ++  +L ++     N  R +   +   + NL     L      + 
Sbjct: 108 LLAEIDPSQFKVALAQAQGQLAKDRATLANARRDLARYQQLGKTNLVSRQELDAQQALVS 167

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + + T   + + +   +   +   I +PI G +   +     N          +V     
Sbjct: 168 ETEGTLKADEAAVASAQLQLDWSRITAPIDGRV-GLKQVDIGNQISSGDTTGIVVLTQTH 226

Query: 328 TYIRAKVTPK-QIQHVKKGYTA--TVRFPHYADIREKKF-KAIIEKIDPIISQQDNNLQ 382
                   P+  I  V +   A   +    +      K     +  +D  I      ++
Sbjct: 227 PIDLVFTLPESDIAAVMQAQKAGKALTVEAWDRTNSTKLSTGELLSLDNQIDATTGTIK 285


>gi|78188536|ref|YP_378874.1| secretion protein HlyD [Chlorobium chlorochromatii CaD3]
 gi|78170735|gb|ABB27831.1| Secretion protein HlyD [Chlorobium chlorochromatii CaD3]
          Length = 360

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 74/221 (33%), Gaps = 29/221 (13%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            A+    +   + IV       +  + E +  L     + ++  L FA            
Sbjct: 75  GALEGEQVRAGQTIVQLDATRAQLAVREARAALAEQQAIVNDNRLRFARRQALFREGAIS 134

Query: 269 NQRTFADEMSKLTILEKTREQK-------------TILSPIAGTIVYNQSFSSSNYAQQS 315
            Q     E S+L   E  ++++             +IL+P +GT +  QS    +YA  +
Sbjct: 135 RQELEESERSRLQSEELLQQRQLQIGMKAEEARKSSILAPFSGT-LTLQSLKVGDYAPAN 193

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             + ++V  +    +  +V    +  ++ G  ATV F    D R K        +  ++ 
Sbjct: 194 TLVAQVVDSNGFMVV-VEVDELDMPRLRVGQAATVAFDALPDKRYKAV------VSRLVP 246

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             D   +T   Y        L   +    ++ G  A     
Sbjct: 247 HTDRITKTSRLY--------LTLQELPASIQEGMTATANIV 279



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/130 (10%), Positives = 41/130 (31%), Gaps = 1/130 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  ++ ++G +  +  V E+ +  SG +       G Q+  G  ++  +       +   
Sbjct: 45  LVQAIYATGFVEADT-VAELHTEASGRVIAVGALEGEQVRAGQTIVQLDATRAQLAVREA 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++   +  ++  +         +     + +  EE     L        +    G+ +
Sbjct: 104 RAALAEQQAIVNDNRLRFARRQALFREGAISRQELEESERSRLQSEELLQQRQLQIGMKA 163

Query: 160 VYRSLKMKLT 169
                   L 
Sbjct: 164 EEARKSSILA 173


>gi|87307586|ref|ZP_01089730.1| multidrug resistance protein MexA [Blastopirellula marina DSM 3645]
 gi|87289756|gb|EAQ81646.1| multidrug resistance protein MexA [Blastopirellula marina DSM 3645]
          Length = 389

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/118 (11%), Positives = 42/118 (35%), Gaps = 4/118 (3%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           ++    +E+++   G +++ +V  G  + +G  +           ++ +          I
Sbjct: 78  IHSCQHIEVRALEGGYLEEIRVNEGQAVKKGDLMFKILPTLFQAKLNAEVAEAN----RI 133

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             E      LN K  V  +    ++ +L     K     +++    +++ +  +  + 
Sbjct: 134 GIELKNAQTLNQKGIVSPQELAIKQAELAKAQAKVELARAELDFTNVTAPFDGIVDRQ 191


>gi|326791372|ref|YP_004309193.1| hypothetical protein Clole_2287 [Clostridium lentocellum DSM 5427]
 gi|326542136|gb|ADZ83995.1| hypothetical protein Clole_2287 [Clostridium lentocellum DSM 5427]
          Length = 654

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 81/241 (33%), Gaps = 28/241 (11%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSIL--------LPIEISVSSSGEI------- 50
           ++N KR     + R+ L+ I    G   W  +          I   V  +G I       
Sbjct: 158 YRNKKRKQRQLILRIALVMIFTTFG--VWGAIEIKEALTKPKISYQVVKTGTIDNSRSLS 215

Query: 51  -LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
            +   N   + S   G ++   V  G ++ +   +    D E        +  +      
Sbjct: 216 GIILRNEQVVYSQDEGNVQYV-VSEGEKVKKDGLVYVLVDEEQLAQSTKTENEVDEQIYQ 274

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
              E+  + F  ++   L        E++   +  ++    +   + I ++   L   + 
Sbjct: 275 KAEERKDISFYQDQIYDLN-------EEVKADIEAFYDNRYENTTHFIYTLRNQLDQNVN 327

Query: 170 RMRSIY-LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           +  SIY   + D E   ++L+  L ++     + K   +   +S   L+ QE       +
Sbjct: 328 KRTSIYTQEQQDQEQSIAVLKTELQANINQYRLGKTAPQAGIIS-YKLDGQETSNLSEVI 386

Query: 229 E 229
           E
Sbjct: 387 E 387


>gi|296271914|ref|YP_003654545.1| RND family efflux transporter [Arcobacter nitrofigilis DSM 7299]
 gi|296096089|gb|ADG92039.1| efflux transporter, RND family, MFP subunit [Arcobacter
           nitrofigilis DSM 7299]
          Length = 417

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 77/233 (33%), Gaps = 35/233 (15%)

Query: 209 NAVSQNDLNQQERIVYKSTLEL----------RENIHEQKNMLRHINELYDEANLEF--A 256
             +++ D  + +  V  S   L            N+  +K       ++Y ++N ++   
Sbjct: 103 QVLAKLDTTKLQAQVDSSKASLTIAKANLKENEVNVKSKKLTYTRTLKMYKQSNGKYPSK 162

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILE-------KTREQKTILSPIAGTIVYNQSFSSS 309
           N L E   + E     +    +++T  E       +  ++  + S I G ++  ++    
Sbjct: 163 NVLDEAKFNYESALSAYDSMKARVTQAEFNLKTDEQNLDKAVVKSSINGIVLN-RAVEVG 221

Query: 310 NYAQQSQ---PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                S     L  +        +   +    + ++KKG   T     Y       FK  
Sbjct: 222 QTVAASMSTPVLFTLAKDLSKMDLVVSIDEADVANIKKGLKVTFTVDAYPKET---FKGT 278

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           I+++     + +  +     YE ++ +      +  + LR G  A      K 
Sbjct: 279 IKQVRLNPIEVNGVVT----YETVVLVD-----NEKLLLRPGMTASAEIITKE 322



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 1/72 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E+ VS++G +    N V+I    SG IK   V+   ++  G  L   +  +    +D  
Sbjct: 62  LEVLVSATGNLKP-TNSVDIGIEVSGTIKNIYVDFNDEVKVGQVLAKLDTTKLQAQVDSS 120

Query: 100 KVSIKNLRCHID 111
           K S+   + ++ 
Sbjct: 121 KASLTIAKANLK 132


>gi|270159461|ref|ZP_06188117.1| multidrug resistance protein [Legionella longbeachae D-4968]
 gi|289165735|ref|YP_003455873.1| HlyD family secretion protein [Legionella longbeachae NSW150]
 gi|269987800|gb|EEZ94055.1| multidrug resistance protein [Legionella longbeachae D-4968]
 gi|288858908|emb|CBJ12831.1| HlyD family secretion protein [Legionella longbeachae NSW150]
          Length = 342

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/154 (10%), Positives = 55/154 (35%), Gaps = 2/154 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
             +NV  + +  SG I    V+NG  + +G  L T         ++     + + +  + 
Sbjct: 53  VVNNVRPVAALTSGYITDLYVQNGDVVKKGQKLFTVFQKPYIYTVEQLTADLASAQAQLA 112

Query: 112 TEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             K+  D      +  ++ +    +++Q      +  S               +      
Sbjct: 113 VLKTTYDRDLKLSENEQRNYIKLYQDDQKYRKGYRIKSVSLMTLQNSQQETQAAKDKWQA 172

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            ++ + +++  +E + + ++++ +  +     ++
Sbjct: 173 ALKQLEIDKNQIEVQGNEIKSIYARLKNAKVNLE 206



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 98/253 (38%), Gaps = 28/253 (11%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            DL +  + L  L +++ +DL + +N  ++N +     +Q+ R  Y+       ++   +
Sbjct: 102 ADLASAQAQLAVLKTTYDRDLKLSEN-EQRNYIKLYQDDQKYRKGYRIK---SVSLMTLQ 157

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQ-RTFADEMSKLTILEKTREQKTILSPIA 297
           N  +      D+          EI ++  + Q        ++L   +   E   + +   
Sbjct: 158 NSQQETQAAKDKWQAALKQL--EIDKNQIEVQGNEIKSIYARLKNAKVNLELTNVYAQGN 215

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I     F+       +QPL  +V  +   YI+A      ++ V+KG    + FP    
Sbjct: 216 GIIQNL-FFTIGTPVNINQPLFSLV-DTDNVYIQANFNETDLRDVRKGSKVLI-FPR-MY 271

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQ--------------EYYEVILKITDLAFSDNNI 403
           +  K F  ++E      ++Q  + +TQ              +   VI++ITDL   D + 
Sbjct: 272 LSRKVFHGVVESDYWSANRQLVDNRTQLQNVVNENQWILLPQRLPVIIRITDL---DPHY 328

Query: 404 ELRNGFPAEVLFT 416
            LR G  A V   
Sbjct: 329 PLRVGTSAYVYIK 341


>gi|264677547|ref|YP_003277453.1| copper efflux system proteincusB precursor [Comamonas testosteroni
           CNB-2]
 gi|299529155|ref|ZP_07042602.1| putative copper efflux system proteincusB precursor [Comamonas
           testosteroni S44]
 gi|262208059|gb|ACY32157.1| putative copper efflux system proteincusB precursor [Comamonas
           testosteroni CNB-2]
 gi|298722856|gb|EFI63766.1| putative copper efflux system proteincusB precursor [Comamonas
           testosteroni S44]
          Length = 401

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 90/301 (29%), Gaps = 21/301 (6%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           KA     E ++      +   + V    ++SV           R +      +  + + +
Sbjct: 47  KAELDPMEVVVSAEMATNFKTAAVTQAEVASVQEVAGRIEANERKVTRIGAAVTGRVTEV 106

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ---KNMLRHIN 245
            A      K    +  +      +   L         +  E       Q    +++    
Sbjct: 107 LAETGDRVKAGQTLARVASPELTT-AQLAYMRASATATLAERSVERARQLIAADVIGSAE 165

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L  E+ ++ A      + D  +     AD +S L           I +  AG ++  Q 
Sbjct: 166 LLRRESEVQIARAELRAAGDQLKLMGLSADALSSLRAKGNVAPNAAITASAAGIVIERQV 225

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH-VKKGYTATVRFPHYA-DIREKKF 363
            S    AQ   PL  +   S +  + A   P+QI   V+ G    +  P     + E   
Sbjct: 226 -SQGQVAQPGDPLFTVADLSNVWVVGA--LPEQIARSVQTGQNVQIDVPALGLTVEETPI 282

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK-NTTL 422
              I  +   +S +           V ++       + ++ L+    A +        TL
Sbjct: 283 SGKIIYVGDTVSPETRT--------VTIRTQ---VDNKDLALKPQMLATMKIQGAMEKTL 331

Query: 423 A 423
           A
Sbjct: 332 A 332



 Score = 40.0 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 4/124 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTF-EDIETTDL 95
             +      +G I   +  V  I +  +G + +   E G ++  G  L        TT  
Sbjct: 73  AEVASVQEVAGRIEANERKVTRIGAAVTGRVTEVLAETGDRVKAGQTLARVASPELTTAQ 132

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   + S          E++    L     +       RE ++     +  +   ++   
Sbjct: 133 LAYMRASATATLAERSVERAR--QLIAADVIGSAELLRRESEVQIARAELRAAGDQLKLM 190

Query: 156 GISS 159
           G+S+
Sbjct: 191 GLSA 194


>gi|325983692|ref|YP_004296094.1| efflux transporter, RND family, MFP subunit [Nitrosomonas sp.
           AL212]
 gi|325533211|gb|ADZ27932.1| efflux transporter, RND family, MFP subunit [Nitrosomonas sp.
           AL212]
          Length = 413

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 71/193 (36%), Gaps = 14/193 (7%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             VEI+S  SGIIKK     G  I +G  L   + +    +    K  +      +D  K
Sbjct: 73  RPVEIRSQVSGIIKKVFFTEGRNIKKGDQLYLIDPVPFRAIYLSAKAKVAQAEARLDLAK 132

Query: 115 SALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             L     L  +  V +K  +  + ++        +  + +          ++   +   
Sbjct: 133 QDLARVLPLLEQQAVSKKNVDDAQAEVRGAKASLEAAQNDLIKAKFDLDNTAISAPVNGR 192

Query: 172 --RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
             RS +     +  + +LL          +  +  ++   +V ++ L ++ R + +  ++
Sbjct: 193 IGRSQFYEGRLISAQETLLAT--------IDQLDPMYVNVSVPESYLLRRRREIAEHKVQ 244

Query: 230 LRENIHEQKNMLR 242
            R +I + + ++ 
Sbjct: 245 -RPDIFQLRGVMT 256



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 26/226 (11%), Positives = 65/226 (28%), Gaps = 34/226 (15%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +      +  V ++   L     +   +L  + +            + +   ++   + +
Sbjct: 111 RAIYLSAKAKVAQAEARLDLAKQDLARVLPLLEQQAVSKKN-----VDDAQAEVRGAKAS 165

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL---------MKI-- 321
                + L   +   +   I +P+ G I  +Q +         + L         M +  
Sbjct: 166 LEAAQNDLIKAKFDLDNTAISAPVNGRIGRSQFY-EGRLISAQETLLATIDQLDPMYVNV 224

Query: 322 -VPHSKLT-----YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            VP S L          KV    I  ++      + F         + + +++  D  + 
Sbjct: 225 SVPESYLLRRRREIAEHKVQRPDIFQLR----GVMTFS--DGSVYPQ-EGVLDFADVALR 277

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +   LQ +  +       + AF+        G   ++       T
Sbjct: 278 PETGTLQGRFVFP----NPEGAFAPGQSYFYPGQFVKIRIKGYTRT 319


>gi|149201695|ref|ZP_01878669.1| putative efflux system inner membrane protein [Roseovarius sp.
           TM1035]
 gi|149144743|gb|EDM32772.1| putative efflux system inner membrane protein [Roseovarius sp.
           TM1035]
          Length = 274

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/121 (9%), Positives = 37/121 (30%), Gaps = 1/121 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   +   G I    +   + S  +G++ +   E G  +  G PL+  +  +    +++ 
Sbjct: 18  VAEQLVFEGRIEAS-DRAVLSSRLNGVVAEILFEGGDHVKAGQPLIRLDPTDVALALEMT 76

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  +   +  +D             D    A  +      +      +          ++
Sbjct: 77  EARLAEAQARLDGAARRTARQEEMLDRGVAADATVGPARTERAMAEAAVALAEAERRRAA 136

Query: 160 V 160
           +
Sbjct: 137 L 137


>gi|123441145|ref|YP_001005133.1| putative type I secretion protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088106|emb|CAL10894.1| putative type I secretion protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 391

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 50/142 (35%), Gaps = 11/142 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     V  + +  +G + K  V+ G ++ +G  L   +     + +   
Sbjct: 51  IERNVMATGSLKPSLQV-NVGAQVNGQLTKLYVKQGDRVTRGQLLAEIDPTLQQNELRKS 109

Query: 100 KVSI----------KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +  +          + L      E      L      ++ A E  + Q    L + H   
Sbjct: 110 EAELQSAQAQKQASQALLRQYLLEFRRQQTLARDGSGVKSALEKAQAQYDSQLAQLHVNE 169

Query: 150 SKVFNYGISSVYRSLKMKLTRM 171
           +++    ++       +  TR+
Sbjct: 170 AQIVQSQMAMETAKANLGFTRI 191



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 89/302 (29%), Gaps = 20/302 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V+  +    ++ +            +       S+  SL++ +    +  L +L ++   
Sbjct: 27  VIALSISDSQQDVPQLTETIGRGDIERNVMATGSLKPSLQVNVGAQVNGQLTKLYVKQGD 86

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE--QKNMLRH 243
            + R  L +          L +    S+ +L   +     S   LR+ + E  ++  L  
Sbjct: 87  RVTRGQLLAEIDPTLQQNELRK----SEAELQSAQAQKQASQALLRQYLLEFRRQQTLAR 142

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                  A  +           L  N+         +   +       I++PI G ++  
Sbjct: 143 DGSGVKSALEKAQAQYDSQLAQLHVNEAQIVQSQMAMETAKANLGFTRIMAPIDGEVLGI 202

Query: 304 QSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREK 361
                      SQ  P + ++ +     +  +++   I  V  G           + R  
Sbjct: 203 -VTKEGQTIVSSQTAPTILVLANVDTMTVHTRISETDILKVNVGQPLWFYVVADPERRYD 261

Query: 362 KFKAIIEKIDPIISQQDNNLQTQE------YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                I++      ++D++           YY  I  I +         LR    A+V  
Sbjct: 262 SRMDAIQEASAESLREDSSGSANSQQPSAVYYNGIFNIANQERL-----LRTSMTAQVFI 316

Query: 416 TA 417
             
Sbjct: 317 IT 318


>gi|73537802|ref|YP_298169.1| secretion protein HlyD [Ralstonia eutropha JMP134]
 gi|72121139|gb|AAZ63325.1| Secretion protein HlyD [Ralstonia eutropha JMP134]
          Length = 407

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 62/205 (30%), Gaps = 23/205 (11%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + E +  +  LEL    + ++  L       ++  L     L+E    +    +      
Sbjct: 148 RSELLAAQKRLELARTTYTREKRLWEDKISAEQDFLAARTALQEAEIAVRNATQKLTAIG 207

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VT 335
           ++         +  + +P  G +V     +          +  I   S L  + A+  + 
Sbjct: 208 ARPASA--GLNKFELRAPFDGIVVEKHL-ALGEAVAADTTVFTI---SDLATVWAEFVIA 261

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           PK +  V+ G   ++    +           +  +  ++ QQ             + +++
Sbjct: 262 PKDLSQVRLGEKVSIASTAFD----GTATGTVSYVGSLLGQQTRTAT------ARVTLSN 311

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNT 420
              +      R G    V    + T
Sbjct: 312 PDMAW-----RPGLFVTVSVAGQET 331


>gi|56752233|ref|YP_172934.1| hypothetical protein syc2224_d [Synechococcus elongatus PCC 6301]
 gi|81300679|ref|YP_400887.1| secretion protein HlyD [Synechococcus elongatus PCC 7942]
 gi|56687192|dbj|BAD80414.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81169560|gb|ABB57900.1| Secretion protein HlyD [Synechococcus elongatus PCC 7942]
          Length = 427

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 79/229 (34%), Gaps = 27/229 (11%)

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++ +  + +    +  + + + S     +         R  L   + D   +  LF+  A
Sbjct: 106 RLQSTAVVAAAAEVAARQSEVASQRAEVIAAMASVEQARLQLQQARSDAARLTRLFQAGA 165

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +S  +    +  V  +   +R    + +   + +         + A   +E +R      
Sbjct: 166 ISAQEAETAQTAVLTAEQAVRTAQQQVQTRQQAVAAAERRVVAQQAIANQEQAR------ 219

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                           R    +++P+ G ++  +S  + N A++   ++ I        +
Sbjct: 220 ----------------RNFTQLIAPVTGLVLE-RSTEAGNLAREGDEILTIG-DFSRIKV 261

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
             +V+  ++ +++ G +  VR   +       F   I +I P+  ++  
Sbjct: 262 VLRVSELELANLRVGQSVQVRLDAFPKQT---FTGQISRIAPVADRRTR 307



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 28/261 (10%), Positives = 89/261 (34%), Gaps = 19/261 (7%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IE 91
           P++ +   +G      +V  +++   G +    V+ G  +  G  L   +D       + 
Sbjct: 56  PLQEATRYTGTTEPFQSV-SLRAQVEGQVLGLSVDVGDPVQSGQLLARLDDRLQSTAVVA 114

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
               +  ++  + + R  +    ++++    +  + +   ++     L   G   +  ++
Sbjct: 115 AAAEVAARQSEVASQRAEVIAAMASVE--QARLQLQQARSDAARLTRLFQAGAISAQEAE 172

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + +  ++++    ++++        E +    +A+ +  Q      +       +
Sbjct: 173 TAQTAVLTAEQAVRTAQQQVQTRQQAVAAAERRVVAQQAIANQEQARRNFTQ------LI 226

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-- 269
           +       ER      L    +          I  +   + LE AN     S  +  +  
Sbjct: 227 APVTGLVLERSTEAGNLAREGDEILTIGDFSRIKVVLRVSELELANLRVGQSVQVRLDAF 286

Query: 270 -QRTFADEMSKLTILEKTREQ 289
            ++TF  ++S++  +   R +
Sbjct: 287 PKQTFTGQISRIAPVADRRTR 307


>gi|20094127|ref|NP_613974.1| SMC1-family ATPase [Methanopyrus kandleri AV19]
 gi|49036452|sp|Q8TXI4|RAD50_METKA RecName: Full=DNA double-strand break repair rad50 ATPase
 gi|19887131|gb|AAM01904.1| SMC1-family ATPase involved in DNA repair [Methanopyrus kandleri
           AV19]
          Length = 876

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 85/258 (32%), Gaps = 12/258 (4%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTP--LLTFEDIETTDLIDLKKV 101
           V +SG    ED   E+ +   G+ +         I QG    L+     E   ++D    
Sbjct: 106 VVASGR--AEDVDREVMNALGGVDRDVF-REAVYIRQGEIAKLVEATREERKRIVDRTLG 162

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
             +  +      +             E+  + +  +      +      K     +    
Sbjct: 163 LAEFKKAREQAHELLRVAEAKLETFRERVRDLKGSKKELKRVERELEELKREVKELEPEV 222

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE- 220
             LK +L  +R        LE +  LL   + S +     ++ L E+   ++ +L +   
Sbjct: 223 EELKERLNELREAKREFERLEGELRLLENKIESLKGRRDDLRKLVEEGKEAERELQRLGD 282

Query: 221 -----RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                R +     ELR  I E +N+L  +  L +         L+ + R+LE+ +     
Sbjct: 283 VPSKVRELENEEAELRRRIEELRNLLDDLRSLRNRLES-AEEELEGVKRELEELKDEAGV 341

Query: 276 EMSKLTILEKTREQKTIL 293
           +  +L   +    + +  
Sbjct: 342 DPERLVEFKDKIVEASER 359



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 11/183 (6%)

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG-ISSVYRSLKMK 167
            ++ E   L    N+    ++ FE  E +L     K  S   +  +   +    +  + +
Sbjct: 217 ELEPEVEELKERLNELREAKREFERLEGELRLLENKIESLKGRRDDLRKLVEEGKEAERE 276

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           L R+  +     +LEN+ + LR  +   +  L  +++L       +N L   E  +    
Sbjct: 277 LQRLGDVPSKVRELENEEAELRRRIEELRNLLDDLRSL-------RNRLESAEEELEGVK 329

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISR--DLEQNQRTFADEMSKLTILEK 285
            EL E   E       + E  D+  +E +  L+++ R  +L++     +DE+S+L   E+
Sbjct: 330 RELEELKDEAGVDPERLVEFKDKI-VEASERLRDLRREEELKRKLEKVSDELSELGDREE 388

Query: 286 TRE 288
           T +
Sbjct: 389 TLQ 391


>gi|307546489|ref|YP_003898968.1| efflux transporter RND family, MFP subunit [Halomonas elongata DSM
           2581]
 gi|307218513|emb|CBV43783.1| efflux transporter, RND family, MFP subunit [Halomonas elongata DSM
           2581]
          Length = 371

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 70/208 (33%), Gaps = 21/208 (10%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD-----LEQNQR 271
              ER    +     E    + ++L    +   +++L    Y+ +   D     L+  + 
Sbjct: 94  LDDERYRLVAQQRRAEAREAEASLLEKRQDYRRQSSLADKGYVSDTQLDTARAGLDTAES 153

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
             A  ++   + E+  EQ T+ +P AG++   +    S     +Q +++++       + 
Sbjct: 154 RHASAVAAQELAERDLEQTTLSAPFAGSV-SARQAEPSERVGANQAILEVISDRDGFEVE 212

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             V    +  +  G T  V  P                    ++Q     ++   Y +IL
Sbjct: 213 TSVPETLVDALSTGSTHDVSLPALGGATTP----------ATLTQLGTQPRSSNNYPIIL 262

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + +         +R G  AEV      
Sbjct: 263 ALNEPPAG-----VRAGMTAEVELALAE 285


>gi|299741152|ref|XP_001834263.2| hypothetical protein CC1G_12342 [Coprinopsis cinerea okayama7#130]
 gi|298404579|gb|EAU87543.2| hypothetical protein CC1G_12342 [Coprinopsis cinerea okayama7#130]
          Length = 655

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 56/204 (27%), Gaps = 16/204 (7%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL-----DFLNNKYDVLEKAFESREEQLL 139
            + +  +    ++ +   +         E+  L     D       ++E+          
Sbjct: 330 ASLDFSQRQSWLEERNTELSASLERAQRERDTLTEDCRDLRTKNESLVERLVSLALTPEA 389

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           D   K   T +      +  +           +       DLE +   LR+LL +     
Sbjct: 390 DSGQKQLETGNVQITKRMERLAAESTQAREEAKVAQQRSKDLERELKELRSLLDAAN--- 446

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                   KN V+ N+L   +R +     +    + E     R  N   +          
Sbjct: 447 -------AKNIVTSNELEAAQRQLQTLRGDRNRLVEELAAA-RATNTASESEIARLREDN 498

Query: 260 KEISRDLEQNQRTFADEMSKLTIL 283
              S  + +++ T  +    L   
Sbjct: 499 NAQSHQIWEHEATIRELRVALNRA 522


>gi|260776806|ref|ZP_05885700.1| hypothetical protein VIC_002196 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260606472|gb|EEX32746.1| hypothetical protein VIC_002196 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 361

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 53/139 (38%), Gaps = 12/139 (8%)

Query: 46  SSGEILNEDNVVEIKSPFS--------GIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
           S G ++  + V  +++           G +    V+ G Q+ QG  L+T +        +
Sbjct: 46  SDGYVVPREYVGVVQAAQRANLGFELAGKVLSINVDVGDQVKQGDILVTLDTQLLDAERN 105

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                ++ +R       S L     +Y + +K F S E ++     +  S  +       
Sbjct: 106 ELLAQLEEIRSQAKLTDSNLKR---QYSLQKKGFSS-ESEIDALTSEKESLAANALRVKS 161

Query: 158 SSVYRSLKMKLTRMRSIYL 176
           +    SLK++ + +++ Y 
Sbjct: 162 ALEANSLKLEKSILKAPYA 180


>gi|226328274|ref|ZP_03803792.1| hypothetical protein PROPEN_02168 [Proteus penneri ATCC 35198]
 gi|225203007|gb|EEG85361.1| hypothetical protein PROPEN_02168 [Proteus penneri ATCC 35198]
          Length = 102

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 28/86 (32%), Gaps = 5/86 (5%)

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS--DNNIE 404
            A ++   +   R    +  I  I     Q +   Q    Y V++++   A    +   +
Sbjct: 9   KAVIKIDAFPYTRYGTIEGTIINIAKDSVQHE---QLGLVYPVLIELDKQAIGEDEEQYQ 65

Query: 405 LRNGFPAEVLFTAKNTTLAQEIIHPI 430
           L  G         +   +   ++ PI
Sbjct: 66  LATGMSLVADVIIEKRRVIDYLLSPI 91


>gi|237808116|ref|YP_002892556.1| efflux transporter, RND family, MFP subunit [Tolumonas auensis DSM
           9187]
 gi|237500377|gb|ACQ92970.1| efflux transporter, RND family, MFP subunit [Tolumonas auensis DSM
           9187]
          Length = 341

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 60/193 (31%), Gaps = 17/193 (8%)

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            EL+  + E +   R+          +        +  L+Q +                 
Sbjct: 89  AELQATLREMQIRQRNAENNLSRVG-KLYQRRMVSAELLDQARTEAEAAREVTQRTLVQM 147

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
              T++SP+ G I+  +     NY   +Q +  +   +    + A V  + I  VK    
Sbjct: 148 NALTLISPVDGEIIK-RDGEVGNYMPANQVVFSLRKSATQLRLTADVDEEDIPRVKPAQR 206

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             +    +     K F+ II +I P       +      Y V + ++D      ++    
Sbjct: 207 VLITADAFP---GKVFEGIIREITPEGDSVTRS------YRVRISLSD------DVPFFI 251

Query: 408 GFPAEVLFTAKNT 420
           G  AE        
Sbjct: 252 GMTAESNILISQR 264



 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/167 (10%), Positives = 52/167 (31%), Gaps = 1/167 (0%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +  +V ++G +  +   + + +  +  +     + G Q+  G  L  F+D E    + 
Sbjct: 38  GQVVEAVYATGTVEAD-PPIHVATERAARLTALLADEGMQVKTGQVLAKFDDAELQATLR 96

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             ++  +N   ++              ++L++A    E              +      +
Sbjct: 97  EMQIRQRNAENNLSRVGKLYQRRMVSAELLDQARTEAEAAREVTQRTLVQMNALTLISPV 156

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                    ++            L   ++ LR      ++D+  +K 
Sbjct: 157 DGEIIKRDGEVGNYMPANQVVFSLRKSATQLRLTADVDEEDIPRVKP 203


>gi|213626334|gb|AAI71708.1| Unknown (protein for MGC:198435) [Danio rerio]
          Length = 1174

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 11/210 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS-- 150
             + I   +  +  LR  +  E+SA   L      LE+  +  + ++ D   +   +    
Sbjct: 963  NERITRCREQVDQLRSELMQERSARHDLEMDKSALERQIKELKSRIADMGTQSRPSAGVT 1022

Query: 151  ------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MK 203
                  +     + S  R         R +     D+       R   +  +  L++ +K
Sbjct: 1023 MLENKVQELEDRLRSEEREKNTIQAAQRRLDRKLKDVTATLDQERNQHAEQRDQLSLRVK 1082

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L  +   S+ ++ + E +  K   EL E    Q  +   +N + +E   +     +   
Sbjct: 1083 ALKRQLDESEGEVERLEGVRRKVLRELEEQRELQAALQAKVNAMDNELKRKIQQSRRSTL 1142

Query: 264  RDL--EQNQRTFADEMSKLTILEKTREQKT 291
                    +  ++D  S  +IL  +  Q T
Sbjct: 1143 GSTLSSDEEDNYSDTKSITSILTDSPLQTT 1172



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 83/235 (35%), Gaps = 22/235 (9%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY----DVLEKAF 131
             + +    L  +  ET    +  K + +         K+ +D L N+     + L KA 
Sbjct: 655 DSLKKAQSELEKQKAETLKKQEELKSATRASEKRETELKAEIDRLINQLKKEKEELSKAI 714

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYR-SLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           E  ++ L+    K   +  ++         R +   +L        +   LE ++  L+ 
Sbjct: 715 EKTQQPLVSDQTKDPESNLELQEANARLRERIARMTRLHSSVPDSSSSDALEEENRSLKT 774

Query: 191 LLSSHQKDLTMM--------------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            L   ++  + +              +   E     ++DL +Q+R++ +S  ++ +   E
Sbjct: 775 QLEESRRAASRLGVEKEELNRRLEEREREREALRRGKSDLEEQKRLLDRSLDKINK---E 831

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++M+    +       +   +     R+L+  QR   D + +L   +   +   
Sbjct: 832 MESMMGDSRQSVQVLQSQLEEFRDRSRRELQDAQRLSKDRLVELQRAQALLKTTQ 886



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 83/237 (35%), Gaps = 31/237 (13%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            PL++ +  +    ++L++ +   LR  I         + +         E+R  +    
Sbjct: 719 QPLVSDQTKDPESNLELQEAN-ARLRERIARMTRLHSSVPDSSSSDALEEENRSLKTQLE 777

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             +  ++           + R L+ +     ++   + DLE +  LL   L    K++  
Sbjct: 778 ESRRAASR---LGVEKEELNRRLEEREREREALRRGKSDLEEQKRLLDRSLDKINKEMES 834

Query: 202 M-----------------------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           M                       + L +   +S++ L + +R         +E +   K
Sbjct: 835 MMGDSRQSVQVLQSQLEEFRDRSRRELQDAQRLSKDRLVELQRAQALLKT-TQEEVSRVK 893

Query: 239 NMLRHINELYDEANLE---FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
             L    E  D A L+    ++ LK +  +L+ ++ +  D   ++ +LE   +   I
Sbjct: 894 KELLSCTEERDSAQLDKELLSSRLKNMETELQTDRSSQTDRSREIRLLEDKVKTLEI 950



 Score = 36.9 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 46/115 (40%), Gaps = 5/115 (4%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           T +   +     L+ +    R  L  +Q  +  ++ +  + A  ++ L QQE  + +   
Sbjct: 420 TELEQAFGRNTQLQQQLDKSRRELQENQDQMVELR-MDREGA--ESRLRQQEDQLAQLQE 476

Query: 229 ELRENIHEQ-KNMLRHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLT 281
           ELR  +    ++    ++ L  +A L  +  L++   D L Q +R        L 
Sbjct: 477 ELRRTLENSPQSDSMQLDLLTVQAELSESQLLRQKLEDTLRQRERELTALKGALK 531


>gi|206580782|ref|YP_002237416.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|290508543|ref|ZP_06547914.1| inner membrane protein yiaV [Klebsiella sp. 1_1_55]
 gi|206569840|gb|ACI11616.1| auxiliary transport protein, membrane fusion protein (MFP) family
           [Klebsiella pneumoniae 342]
 gi|289777937|gb|EFD85934.1| inner membrane protein yiaV [Klebsiella sp. 1_1_55]
          Length = 378

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 71/225 (31%), Gaps = 21/225 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   ++ +   L      +R+      D   +    +A      +D    +   +  A+ 
Sbjct: 99  YRARLNKLKADLAAGEAMLRAKQATIDDASARVQQAQAEYDRVTRDY---QRYAQGAAMP 155

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            N  ++Q+    +  ++++  + +              A  +  N  +++S         
Sbjct: 156 VNPFSEQDVTHARQQVQIQTAVLQA-------------AKAQLQNAREQVSGRYNGLDAN 202

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
            A   S++   E    Q  + +P  G +    +    +      +P++  +P  K   + 
Sbjct: 203 IASLKSQILEAEYNLAQTVVRAPSDGYVTQLLARPGMTAVRLPFKPVLVFIPQQKRQVV- 261

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           A      +  +  G +A V F              + ++ P I  
Sbjct: 262 AVFRQNSVLRLTAGDSAEVVFNGLPGSVY---SGKVSRVLPAIPD 303



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/139 (7%), Positives = 45/139 (32%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +   +    + +G  L   +D      ++  K  +      +  +++ +D  + +
Sbjct: 71  SGEVVEVTSKTNVLMKKGELLFRIDDTRYRARLNKLKADLAAGEAMLRAKQATIDDASAR 130

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +  ++        +        +      ++   + ++++   +++      +   
Sbjct: 131 VQQAQAEYDRVTRDYQRYAQGAAMPVNPFSEQDVTHARQQVQIQTAVLQAAKAQLQNARE 190

Query: 184 KSSLLRALLSSHQKDLTMM 202
           + S     L ++   L   
Sbjct: 191 QVSGRYNGLDANIASLKSQ 209


>gi|182624719|ref|ZP_02952500.1| conserved hypothetical protein [Clostridium perfringens D str.
           JGS1721]
 gi|177910116|gb|EDT72510.1| conserved hypothetical protein [Clostridium perfringens D str.
           JGS1721]
          Length = 376

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 51/133 (38%), Gaps = 1/133 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V  +G+I  E           G + K +VENG  + +G  L T+++ +    ++  ++ +
Sbjct: 48  VFVNGKIEPEKVENIFLDATKGTVDKVEVENGDVVEKGDTLFTYKNDQVQSQVEQLELQL 107

Query: 104 KNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            + +    +  K   +      D+ +   E++  Q         +   ++    +    +
Sbjct: 108 NSAKSQKEEINKQNAEAKKQLEDLKKAGLENQMPQGGQMPNLGQNAGGEISTGSVDEQIK 167

Query: 163 SLKMKLTRMRSIY 175
            L+ ++  ++   
Sbjct: 168 LLEKQIKALKDKE 180



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 65/212 (30%), Gaps = 26/212 (12%)

Query: 212 SQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEF--------ANYLKEI 262
           SQ +  + +    KS  E + +   E K  L  + +   E  +           N   EI
Sbjct: 98  SQVEQLELQLNSAKSQKEEINKQNAEAKKQLEDLKKAGLENQMPQGGQMPNLGQNAGGEI 157

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           S      Q      + K     K +E   + +PI G ++  +S +       +QP   I 
Sbjct: 158 STGSVDEQIKL---LEKQIKALKDKEYYKVTAPIGGKVILAESST-----NPTQP--YIT 207

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI-IEKID------PIIS 375
             S   YI   V  K    +K+G    +           K  ++    ID          
Sbjct: 208 VESGDYYISGSVNEKDQPKIKEGQEVQITILSTNKNINGKISSVGNTPIDNGASLAAQTG 267

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            Q        YYEV +         N   ++ 
Sbjct: 268 AQGGAGGNMSYYEVKITPDSQEDLTNGFHVQA 299


>gi|157375061|ref|YP_001473661.1| putative secretion protein [Shewanella sediminis HAW-EB3]
 gi|157317435|gb|ABV36533.1| putative secretion protein [Shewanella sediminis HAW-EB3]
          Length = 352

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 69/189 (36%), Gaps = 12/189 (6%)

Query: 15  ASLKRMTLLSIIGIIGLITWSIL-LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           A   ++++L  + I      +   +P+     ++       +V ++    +G I    V+
Sbjct: 8   ARWIKISMLLFVMIFSYFILADFNMPLTQQAMAT------RDVTKVAPRINGPIVAINVK 61

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL-----DFLNNKYDVLE 128
           N   + +G  L   +       ++   ++++  R   +   ++L     +   +    L+
Sbjct: 62  NNQVVSKGEVLFYIDSTPYQLNVEKAALNLEQTRKSNEELDASLAAAAAEVKASSIIALQ 121

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           K  +++    L                  ++   +L     R++ + + R +L+  +  L
Sbjct: 122 KQADAKRVNSLFDRNGVSQQQKDSLESDATAAKANLLASKARLKELTVRRGELDENNVNL 181

Query: 189 RALLSSHQK 197
           R  L+  ++
Sbjct: 182 RVALNQLKQ 190



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 61/170 (35%), Gaps = 22/170 (12%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNAVS 212
           Y ++    +L ++ TR  +  L+       + +  + + + QK     +  +LF++N VS
Sbjct: 80  YQLNVEKAALNLEQTRKSNEELDASLAAAAAEVKASSIIALQKQADAKRVNSLFDRNGVS 139

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q   +  E     +   L  +    K +                        +L++N   
Sbjct: 140 QQQKDSLESDATAAKANLLASKARLKELTVR-------------------RGELDENNVN 180

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
               +++L   +       + +   GT+   Q  +   YA   QPL+ +V
Sbjct: 181 LRVALNQLKQAKLNLSYTQVRAKQDGTVTNLQLQA-GAYASAGQPLLALV 229


>gi|114570888|ref|YP_757568.1| RND family efflux transporter MFP subunit [Maricaulis maris MCS10]
 gi|114341350|gb|ABI66630.1| efflux transporter, RND family, MFP subunit [Maricaulis maris
           MCS10]
          Length = 459

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 68/200 (34%), Gaps = 26/200 (13%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE------M 277
            ++ L+L E+  E++  L       ++  L+    L+E   ++    +           +
Sbjct: 193 ARARLDLAESSFEREERLWERQISAEQDFLDARRALEEARIEVRSAGQQLDALGVDVSTL 252

Query: 278 SKLTILEKT-REQKTILSPIAGTIVYNQSFSSSNYAQQS-QPLMKIVPHSKLTYIRAKVT 335
            ++         +  + +PI+GTI+   +       ++  QP   IV  +   ++ A + 
Sbjct: 253 PRMVASSDVSLTRYELAAPISGTIIERHAV-LGEVLEEGAQPPAFIVADTDSVWVDAAIY 311

Query: 336 PKQIQHVKKGYTATVRFPHYADIREK-KFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
              +  ++ G   ++              ++ I+ + P I ++             + I 
Sbjct: 312 GADLGRIRAGAPVSI-----DPGDGGQPIESSIDFVSPQIGERTRTG------RARIVID 360

Query: 395 DLAFSDNNIELRNGFPAEVL 414
                +    LR G    V 
Sbjct: 361 -----NPGDRLRPGMFVTVF 375



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 8/100 (8%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    SGI++   V  G ++  G  L         D     K S  + R  +D  +S+ +
Sbjct: 150 VTPRVSGIVRSVAVAEGDRVEAGDVLAVLNSRPLAD----AKASYLSARARLDLAESSFE 205

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
               + + L +   S E+  LD          +V + G  
Sbjct: 206 ----REERLWERQISAEQDFLDARRALEEARIEVRSAGQQ 241


>gi|159185671|ref|NP_357332.2| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
 gi|159140805|gb|AAK90117.2| HlyD family secretion protein [Agrobacterium tumefaciens str. C58]
          Length = 425

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 53/143 (37%), Gaps = 5/143 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             + +  +++G      ++  I    +G++ +   ++G  I  G  +L  +D      +D
Sbjct: 85  ATLPMDATATGW-AVAADITNIAPLQAGLVTEISAKDGQHIKAGDLILKLDDRIARAAVD 143

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K +I   +  ++  ++A     N    L K     ++ L           +K+     
Sbjct: 144 KDKANIAADQATLEQTEAAFQRATN----LVKQSAESQQVLDQARAARDGASAKIDADKA 199

Query: 158 SSVYRSLKMKLTRMRSIYLNRLD 180
           +     + ++   +R+ +  RL 
Sbjct: 200 TLASDQVTLEHMEIRAPFDGRLG 222



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 60/205 (29%), Gaps = 30/205 (14%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEAN------LEFANYLKEISRDLEQNQRTFA 274
           RI   +  + + NI   +  L      +  A        E    L +     +       
Sbjct: 136 RIARAAVDKDKANIAADQATLEQTEAAFQRATNLVKQSAESQQVLDQARAARDGASAKID 195

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
            + + L   + T E   I +P  G  + + + S   Y      ++ I        +  ++
Sbjct: 196 ADKATLASDQVTLEHMEIRAPFDGR-LGDITVSPGAYLSAGVNIVTIT-KYDPISVSFRL 253

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           + + +  +++G                  K     +DP  +  +       +Y+  +  T
Sbjct: 254 SQRYLPQLREG----------------VTKETAVDVDPAATGGEPMRGVLRFYDNAVDQT 297

Query: 395 ------DLAFSDNNIELRNGFPAEV 413
                    F ++   L  G    V
Sbjct: 298 SGTVLAKAEFKNDRGLLWPGQSVNV 322


>gi|127512711|ref|YP_001093908.1| secretion protein HlyD family protein [Shewanella loihica PV-4]
 gi|126638006|gb|ABO23649.1| secretion protein HlyD family protein [Shewanella loihica PV-4]
          Length = 352

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 78/240 (32%), Gaps = 25/240 (10%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             S  +  F         +L+        +         + +      +  Q++   +++
Sbjct: 72  LFSLDATPFLLAQEQAELALEQARQDNAELDAAIAAATAEVNAKEIAYALKQREAKRIQS 131

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L+   +VSQ  ++Q +  V  S  +L     +   +                     +  
Sbjct: 132 LYANQSVSQQMIDQAQTEVKASRSQLLAAKAQLAKVQT-------------------LRG 172

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
              ++        ++L+          I +   G +   Q  +S N   QS P+M ++  
Sbjct: 173 LPGEDNLKLRQAKNRLSQATLALSYTQIRAEHDGVVTNVQL-ASGNMVNQSTPVMALLLD 231

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +      A    K ++H+  G TA V    +     + F+A +  +D  +SQ   +   +
Sbjct: 232 NVDVI--ADFREKNLRHIAPGATALV---AFDGRPGELFQASVSSVDAGVSQAQFDANGR 286



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 73/200 (36%), Gaps = 13/200 (6%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
             R+   + IG I L  + ++  +++ +++    +    + ++    SG +   QV N  
Sbjct: 7   FARLVKFASIGFILLFGYFLVADLKMPLTTQA--MATRTITQVAPQVSGRVVSVQVANNQ 64

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++ QG  L + +              +   +  +  E++  D       +     E   +
Sbjct: 65  KVQQGDLLFSLDATPFL---------LAQEQAELALEQARQDNAELDAAIAAATAEVNAK 115

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           ++   L +  +   +      S   + +    T +++     L  + + + ++ L     
Sbjct: 116 EIAYALKQREAKRIQSLYANQSVSQQMIDQAQTEVKASRSQLLAAKAQLAKVQTLRGLPG 175

Query: 197 KDLTMMKNLFEKNAVSQNDL 216
           +D   ++    KN +SQ  L
Sbjct: 176 EDNLKLRQ--AKNRLSQATL 193


>gi|238797545|ref|ZP_04641042.1| Secretion protein HlyD family protein [Yersinia mollaretii ATCC
           43969]
 gi|238718542|gb|EEQ10361.1| Secretion protein HlyD family protein [Yersinia mollaretii ATCC
           43969]
          Length = 323

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 56/370 (15%), Positives = 116/370 (31%), Gaps = 98/370 (26%)

Query: 49  EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
           E++             G + +  VE G  +  G  L+T E  E    +   + +    + 
Sbjct: 39  EVIVSSKAK-------GRVIERHVERGDDVKAGQLLMTLESPELMAQLAGLEAARDQAQA 91

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            +D                                       +  +       R+LK  L
Sbjct: 92  QLD---------------------------------------ESLHGTREESIRNLKATL 112

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            + ++ Y N L   N+++ +                   K  +S ++L    R    +  
Sbjct: 113 AQAQAEYENALHTYNRNNSV-----------------AAKGFISASELENSRRAKDTAYQ 155

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
              +    Q N+ +  +    E   ++A  +++  +DL Q +    D             
Sbjct: 156 ---QVQAAQANLDQGFHGDRLELRDKYAAAVRQAEQDLAQLKAQTDDL------------ 200

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYT 347
              + +P+AG +    +         S PL+ ++   ++ ++      + I   V+KG  
Sbjct: 201 --QVRAPVAGEVGPIPA-EVGELLNASSPLLTLIRLPQVYFV--FNLREDILASVRKGDK 255

Query: 348 ATVRFPHYADIREKKFKAIIEKIDP--IISQQDNNLQTQEY----YEVILKITDLAFSDN 401
            T+R P     +E++  A +  I P    + +     T ++    +EV L          
Sbjct: 256 ITLRVPAL---KEQEIMAEVRYIAPLGDYATKRATRATGDFDLKTFEVRLYPMQPVD--- 309

Query: 402 NIELRNGFPA 411
              LR G  A
Sbjct: 310 --NLRPGMSA 317


>gi|296476349|gb|DAA18464.1| keratin 34 [Bos taurus]
          Length = 391

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 88/215 (40%), Gaps = 11/215 (5%)

Query: 83  PLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            ++  ++ +   D    K  + ++LR  ++++ ++L  + ++  + +   E++ E L + 
Sbjct: 127 LVIQIDNAKLAADDFRTKYETERSLRQLVESDINSLRRILDELTLCKADLEAQVESLKEE 186

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT- 200
           L        +  N   S +   L +++    ++ LNR+ L    +   AL+ ++++D+  
Sbjct: 187 LLCLKKNHEEEANSLRSQLGDRLNVEVDAAPTVDLNRV-LNETRAQYEALVETNRRDVEE 245

Query: 201 ----MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                 + L ++   S   L   +  +    +ELR  ++  +  L+  + L D       
Sbjct: 246 WYIRQTEELNKQVVSSSEQLQSYQAEI----IELRRTVNALEVELQAQHNLRDSLENTLT 301

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                 S  L Q Q    +  S+L  +    E++ 
Sbjct: 302 ETEARYSCQLAQVQGLIGNVESQLAEIRSDLERQN 336


>gi|307729766|ref|YP_003906990.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1003]
 gi|307584301|gb|ADN57699.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1003]
          Length = 355

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/292 (9%), Positives = 79/292 (27%), Gaps = 5/292 (1%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +      R + +    G +      V    +S +   L     + +        +E +  
Sbjct: 50  VATKLAGRVQTITVDEGDFVKAGQPVATMQVSVLDAQLAEARAQHQQALNTAASIEAQVV 109

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             ++  ++ +  ++  ++  +             R    S  EL ++   ++     +  
Sbjct: 110 QRQSDKAAAEAIVSQRESELDAARRKLARSETLSREGASSMQELDDDRARERGAQATVLA 169

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +     A         L          ++ +  +E       + +P  G + Y +  
Sbjct: 170 AKAQVTAAQAAVDA-TRAQLVAAHSAVHAALATVARVEADISDSQLTAPRDGRVQY-RIA 227

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      ++ IV  S   Y+   +    +  V  G    V      +       + 
Sbjct: 228 EPGEVLPAGGKVLNIVDLSD-VYMTFFLPETVVGKVALGAEVRVILDAAPNYVIPATVSF 286

Query: 367 IEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +        +  +  + + +  + V  +I       +   ++ G P      
Sbjct: 287 VASTAQFTPKTVETTSERQKLMFRVKARINRELLLKHLKLVKTGLPGVAWIR 338



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 45/135 (33%), Gaps = 2/135 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++   V+ G  +  G P+ T +       +   +   +       + ++ +    +  
Sbjct: 56  GRVQTITVDEGDFVKAGQPVATMQVSVLDAQLAEARAQHQQALNTAASIEAQVVQRQSDK 115

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E     RE +L     K     S+  +   +S  + L     R R      L  + +
Sbjct: 116 AAAEAIVSQRESELDAARRKL--ARSETLSREGASSMQELDDDRARERGAQATVLAAKAQ 173

Query: 185 SSLLRALLSSHQKDL 199
            +  +A + + +  L
Sbjct: 174 VTAAQAAVDATRAQL 188


>gi|238505982|ref|XP_002384193.1| cytoskeleton assembly control protein Sla2, putative [Aspergillus
           flavus NRRL3357]
 gi|220690307|gb|EED46657.1| cytoskeleton assembly control protein Sla2, putative [Aspergillus
           flavus NRRL3357]
          Length = 1126

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 73/224 (32%), Gaps = 5/224 (2%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++ Q   L      +T   +   +    N R   + ++  L   + +   LE+    
Sbjct: 433 EQQRLAQEQLLRDQYQTQTQGRLAELEQENLNARAQYERDQLMLQQYDRRVKDLEEQMNQ 492

Query: 134 REEQLLDFLGKYHSTCSKVFNYGI---SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               L +          +     +    S Y +L    +++R  +L+ L       L  A
Sbjct: 493 LTSNL-NMQSASKDEQIRSLQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTTKSLKLKAA 551

Query: 191 LL-SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               + ++   + + L  KN    + + +++R ++        N  E + + R +    +
Sbjct: 552 SAQEAIERREKLERELKTKNLELADMIRERDRALHDRDRLTGNNKEELEKVKRELRLAIE 611

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            A         EIS  L +  R  AD    L    +  E  +  
Sbjct: 612 RAENAERQKGTEISTLLSKYNREMADLEEALRNKNRALEDISSR 655



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 78/210 (37%), Gaps = 7/210 (3%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           FE+ +       +    + LR    T+         + ++  +A   R++ +L    +  
Sbjct: 424 FEEQQRLQAEQQRLAQEQLLRDQYQTQTQGRLAELEQENLNARAQYERDQLMLQQYDRRV 483

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD----LTMM 202
               +  N   S++      K  ++RS+        +K   L  L S  +++    L   
Sbjct: 484 KDLEEQMNQLTSNLNMQSASKDEQIRSLQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTT 543

Query: 203 KNLFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           K+L  K A +Q  + +    ER +    LEL + I E+   L   + L      E     
Sbjct: 544 KSLKLKAASAQEAIERREKLERELKTKNLELADMIRERDRALHDRDRLTGNNKEELEKVK 603

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +E+   +E+ +     + ++++ L     +
Sbjct: 604 RELRLAIERAENAERQKGTEISTLLSKYNR 633


>gi|163854937|ref|YP_001629235.1| RND efflux membrane fusion protein [Bordetella petrii DSM 12804]
 gi|163258665|emb|CAP40964.1| RND efflux membrane fusion protein [Bordetella petrii]
          Length = 381

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 62/191 (32%), Gaps = 25/191 (13%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             EL +          H     D   L+   ++ + +RD  +       + +   + +  
Sbjct: 125 RAELDQARANLALAQSHYRRAVD---LQGRGFVSQQARD--EAASNLKVQQAAAALAQAR 179

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKK 344
            ++ TI +P AG IV  +S S  +Y  Q Q L    P        +  +V       VK 
Sbjct: 180 LDKMTIRAPFAG-IVGLRSMSVGDYVDQGQDLA---PLEAIDPLKVDFRVPEMYFGKVKV 235

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G   TVR            +  +  + P++     ++           +      + +  
Sbjct: 236 GQALTVRLDALPGEVR---QGQVYAVSPLVDAGGRSI-----------LLRATVPNADSR 281

Query: 405 LRNGFPAEVLF 415
           LR G  A V  
Sbjct: 282 LRPGMFARVQL 292



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            +S+ G + ++++V  ++   +G I+    + G  + +G  L+  +D      +D  + +
Sbjct: 76  GISAVGSLRSDESV-VLRPEVAGRIQHIDFQEGQPVTKGQVLIRLDDSVPRAELDQARAN 134

Query: 103 IKNLRCHIDT 112
           +   + H   
Sbjct: 135 LALAQSHYRR 144


>gi|87301391|ref|ZP_01084232.1| hypothetical protein WH5701_15936 [Synechococcus sp. WH 5701]
 gi|87284359|gb|EAQ76312.1| hypothetical protein WH5701_15936 [Synechococcus sp. WH 5701]
          Length = 382

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 53/149 (35%), Gaps = 15/149 (10%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFS-----------GIIKKFQVENGSQILQGTP 83
           +   P  +     GE      +  +    S           G + K +V  G  + +G  
Sbjct: 25  AAFTPPAVQTVVLGEATFTPGIQVVSELESRTSVTLKPETDGRVVKIEVNQGDLVRKGQV 84

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L   ++++ T   D  K   +  +  ++ E+    FLN++  V  K  +    Q +    
Sbjct: 85  LFVLDNVQPTAAYDASKAEAR--KDLLNAER--YIFLNDQGAVSTKERDFYITQAIQSRD 140

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           +  ++ + +    I + +      L+ ++
Sbjct: 141 QARASKATLGYSYIRAPFDGEIGDLSSVK 169



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 62/212 (29%), Gaps = 12/212 (5%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V+Q DL ++ ++++          ++        + L  E  +   +     +++ +   
Sbjct: 73  VNQGDLVRKGQVLFVLDNVQPTAAYDASKAEARKDLLNAERYIFLNDQGAVSTKERDFYI 132

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                   +    + T     I +P  G I    S    ++ +  Q +  IV  + L + 
Sbjct: 133 TQAIQSRDQARASKATLGYSYIRAPFDGEIGDLSSVKVGDFVKTGQAITGIV-SNSLLWT 191

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYE 388
              V       VK G    +            F  +  +  I P       +  +     
Sbjct: 192 NMDVPATVANRVKTGQPVLL-----TTQETPPFRGQGKVVFISPYYRTLSASSSSSP--- 243

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
               +    F +   +L+ G     L   +  
Sbjct: 244 -NTVLVKAEFPNLTGKLKPGQKVTNLIITEEK 274


>gi|330901379|gb|EGH32798.1| secretion protein HlyD [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 391

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 67/203 (33%), Gaps = 22/203 (10%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  +E +V + G +L+  N V++ +  SG ++  +V+ G  + +   L   + +   +
Sbjct: 50  AEVTDMEYAVMAQG-VLHGRNQVDVGAQVSGQLQSLKVKPGDMVKKNQLLAEIDPLPARN 108

Query: 95  LIDLKKVSIKNLRC-----------------HIDTEKSALDFLNNKYDVLEKAFESREEQ 137
            +    V I+ L                         S         D      E++   
Sbjct: 109 ALRQAVVKIEQLTAERDATLHKLKLAESNDRRYQALGSTTAVSKADQDKTRFELEAQRAN 168

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    +  +   +     I   Y  +   +       + +       +++   ++    
Sbjct: 169 LVSLTAQLQTARVQEEAARIKLDYTRIFAPMDGQVLAIVTQEG----QTVIADQMAPVIL 224

Query: 198 DLTMMKNLFEKNAVSQNDLNQQE 220
            +  +  +  K  VS+ D+ + +
Sbjct: 225 KMAQLDTMTVKAQVSEADVLKIK 247



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 71/261 (27%), Gaps = 22/261 (8%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK-----------NAVSQNDLNQQERIVY 224
            N++D+  + S     L     D+     L  +            AV + +    ER   
Sbjct: 68  RNQVDVGAQVSGQLQSLKVKPGDMVKKNQLLAEIDPLPARNALRQAVVKIEQLTAERDAT 127

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              L+L E+   +   L     +      +    L+    +L            +     
Sbjct: 128 LHKLKLAESNDRRYQALGSTTAVSKADQDKTRFELEAQRANLVSLTAQLQTARVQEEAAR 187

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHV 342
              +   I +P+ G ++              Q  P++  +       ++A+V+   +  +
Sbjct: 188 IKLDYTRIFAPMDGQVLAI-VTQEGQTVIADQMAPVILKMAQLDTMTVKAQVSEADVLKI 246

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE---YYEVILKITDLAFS 399
           K G       P   D R       IE      + Q           +Y  +  + +L   
Sbjct: 247 KPGLAVYFTIPGDPDTRYNATLKAIEPGPVDAASQSGATGENSKAVFYNALFDVPNLES- 305

Query: 400 DNNIELRNGFPAEVLFTAKNT 420
                      A V    +  
Sbjct: 306 ----RFYIDMTANVRIVLEAK 322


>gi|326669833|ref|XP_003199092.1| PREDICTED: citron Rho-interacting kinase-like [Danio rerio]
          Length = 1619

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 72/210 (34%), Gaps = 9/210 (4%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             +    + +      L +  IK L   +  + +  D L +K    E+    R + + D 
Sbjct: 280 QAMAQRMETQLEQKEKLFEDKIKVLETQMKADLAEKDLLESKQSTFEEESRERGKVISDQ 339

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR--LDLENKSSLLRALLSSHQKDL 199
               ++  SK+ +        S   KL    SIY  +     E   S LR      +   
Sbjct: 340 AATINAMESKMTSLEQRIAELSEANKLAANSSIYTQKNMKAQEEMISELRQQKFYLESQA 399

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             ++    K       L QQE+      LEL          LR I   ++E  LE    +
Sbjct: 400 GKLEAQNAKLEEHLEKLTQQEQTNKSRVLELEAR-------LREIGLEHEEQKLEIKRQV 452

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            E++  L++ +   +   +    L+   +Q
Sbjct: 453 SELTLSLQEREAQISSLQAARHALDSQLQQ 482



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 57/179 (31%), Gaps = 5/179 (2%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E++ ++        L+   + RE+       K     +++    +S       +   R R
Sbjct: 55  EQARMEVSQEDDKALQLLHDIREQSNKLQEIKEQEYHAQLEEMRVSIRQLEENLSAARRR 114

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           S      +L+        L     +    ++   E+  V   +L      + K+  E + 
Sbjct: 115 SDLYE-SELKESRQTSEELKRKAVEYQQKIQKAKEQGKVEMEELLS---KLQKTNGEQQV 170

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            I E +  L    +   EA  E    +++    +E++      +      L +   +  
Sbjct: 171 KIEELQEKLAKAVKASTEA-TELLQNVRQAKERMERDLERLQTKEDSSDSLRRRLRETE 228



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 68/207 (32%), Gaps = 14/207 (6%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E  E    +   K  ++     + T++ + D L  +    E   +S E Q+         
Sbjct: 188 EATELLQNVRQAKERMERDLERLQTKEDSSDSLRRRLRETEDGKKSLENQV--------- 238

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              ++     S +   ++ K  +++ +    ++LE      +A+    +  L   + LFE
Sbjct: 239 KRLEMVERRESKLKDDIQTKSQQIQQMADKIMELEENLRDSQAMAQRMETQLEQKEKLFE 298

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                +  + + +     +  +L E+                       N ++     LE
Sbjct: 299 D----KIKVLETQMKADLAEKDLLESKQSTFEEESRERGKVISDQAATINAMESKMTSLE 354

Query: 268 QNQRTFADEMSKLTILEKTREQKTILS 294
           Q     ++  +KL        QK + +
Sbjct: 355 QRIAELSEA-NKLAANSSIYTQKNMKA 380



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 71/213 (33%), Gaps = 8/213 (3%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF--LGKY 145
           E  +  +     K  ++ LR  +   +  L+      + L+      EEQ+++   L   
Sbjct: 552 EATDENEERLQLKQDVERLRREVADREMHLNNQKQNIETLKTTCTMLEEQVMELETLNDE 611

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMMKN 204
                + +    S++         R R +      + +N+    +    S Q     +K 
Sbjct: 612 LMEKERQWENWRSALDEEKNQAERRARDLQRQLDSEKQNRLRAEQRNSESRQAVELAVKE 671

Query: 205 LFEKNAVSQNDLNQQERI---VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              +  V Q  L  Q+     +  +  +L +     +   R + +   E   E    L +
Sbjct: 672 HKAEILVLQQALKDQKLKAEGLSDTLGDLEKKHGMLEMNARSLQQ-KLETEREMKQRLMD 730

Query: 262 ISRDLEQNQRTFADEMSKLTI-LEKTREQKTIL 293
               L+Q        + +LT  L+   +Q  +L
Sbjct: 731 EQAKLQQQLDMQKSHIFRLTQGLQDALDQTDLL 763



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 8/201 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    I+  +  + +L   I     A     N     +K  +++EE + +   +     S
Sbjct: 338 DQAATINAMESKMTSLEQRIAELSEANKLAANSSIYTQKNMKAQEEMISELRQQKFYLES 397

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +       +      ++    +        LE ++ L    L   ++ L + +       
Sbjct: 398 QAGKLEAQNAKLEEHLEKLTQQEQTNKSRVLELEARLREIGLEHEEQKLEIKRQ------ 451

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           VS+  L+ QER    S+  L+   H   + L+      +E   E    +  +    ++ Q
Sbjct: 452 VSELTLSLQEREAQISS--LQAARHALDSQLQQAKTELEETTAEAEEEITVLRAHRDEIQ 509

Query: 271 RTFADEMSKLTILEKTREQKT 291
           R F        ++    EQ T
Sbjct: 510 RKFDALRDSCAVITDLEEQLT 530



 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 70/194 (36%), Gaps = 14/194 (7%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           ++  ++ L  K     KA     E L +           +    + +   S      R+R
Sbjct: 168 QQVKIEELQEKLAKAVKASTEATELLQNVRQAKERMERDL--ERLQTKEDSSDSLRRRLR 225

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                +  LEN+   L  +     K    ++             +QQ + +    +EL E
Sbjct: 226 ETEDGKKSLENQVKRLEMVERRESKLKDDIQT-----------KSQQIQQMADKIMELEE 274

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT-REQKT 291
           N+ + + M + +    ++    F + +K +   ++ +        SK +  E+  RE+  
Sbjct: 275 NLRDSQAMAQRMETQLEQKEKLFEDKIKVLETQMKADLAEKDLLESKQSTFEEESRERGK 334

Query: 292 ILSPIAGTIVYNQS 305
           ++S  A TI   +S
Sbjct: 335 VISDQAATINAMES 348


>gi|312080729|ref|XP_003142725.1| hypothetical protein LOAG_07143 [Loa loa]
 gi|307762111|gb|EFO21345.1| hypothetical protein LOAG_07143 [Loa loa]
          Length = 2021

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/206 (10%), Positives = 69/206 (33%), Gaps = 10/206 (4%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
               +  + ++R  + + K   D    +     K    R+ ++            + F   
Sbjct: 1412 KELEGQLDSVRVALASAKKKADEGVLQQMEEMKKKAQRDLEITQKTLAEMEVARERFERS 1471

Query: 157  ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN----LFEKNAVS 212
               + + ++     + ++     DLE K       L+  + +L  + N    L +++   
Sbjct: 1472 KRKLQQEVEDANIELNNVRTYSRDLEKKQRRFDQQLAEERANLQKVVNERDALAQESRDR 1531

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD------EANLEFANYLKEISRDL 266
            +  +      +     +L E+   ++ +   ++E         +   E     +++  +L
Sbjct: 1532 ETRILSLNNDLEGLRSQLEESERVKRMLQMELDESVSSKDDVGKNVHELEKAKRQLEAEL 1591

Query: 267  EQNQRTFADEMSKLTILEKTREQKTI 292
            ++ +    +    + I E  R +  +
Sbjct: 1592 QEQRAQIEELEDAVQIAEDARLRLDV 1617



 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 76/242 (31%), Gaps = 28/242 (11%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
             + +   L        T ++ L    ++ LR  ++  +     L  + D    + +   +
Sbjct: 1517 VVNERDALAQESRDRETRILSLN-NDLEGLRSQLEESERVKRMLQMELDESVSSKDDVGK 1575

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             + +         +++             +++     + L+      KS   R L +  Q
Sbjct: 1576 NVHELEKAKRQLEAELQEQRAQIEELEDAVQIAEDARLRLDVNLQALKSEQERMLAAKEQ 1635

Query: 197  KDLTMMKNLFEK----------------NAVSQNDLNQQERIVYKSTLELRENI------ 234
            +     ++L ++                 A+S     + + I  +  LEL   +      
Sbjct: 1636 ESEEKRRSLLKQIRELENELENERRSRTGAISNRKKIESQLIEMEQQLELANRLKDDYSR 1695

Query: 235  -----HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                  +    ++H NE   ++  E AN L+E+ R L       A  +     L   + Q
Sbjct: 1696 QFKKYQQIIKDMQHDNEEVKQSKEELANSLREMERKLRTLDAENARLVEANESLMSQKRQ 1755

Query: 290  KT 291
              
Sbjct: 1756 LE 1757



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 70/238 (29%), Gaps = 29/238 (12%)

Query: 83   PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL---- 138
             L   E+++     DL+          +  E+        + +V +   E    +     
Sbjct: 1436 VLQQMEEMKKKAQRDLEITQKTLAEMEVARERFERSKRKLQQEVEDANIELNNVRTYSRD 1495

Query: 139  LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            L+   +            +  V           R      L L N    LR+ L   ++ 
Sbjct: 1496 LEKKQRRFDQQLAEERANLQKVVNERDALAQESRDRETRILSLNNDLEGLRSQLEESERV 1555

Query: 199  LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN------ 252
              M++   +++  S++D+ +    + K+  +L   + EQ+  +  + +    A       
Sbjct: 1556 KRMLQMELDESVSSKDDVGKNVHELEKAKRQLEAELQEQRAQIEELEDAVQIAEDARLRL 1615

Query: 253  -------------------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                                E     + + + + + +    +E    T     R++  
Sbjct: 1616 DVNLQALKSEQERMLAAKEQESEEKRRSLLKQIRELENELENERRSRTGAISNRKKIE 1673



 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 21/210 (10%), Positives = 68/210 (32%), Gaps = 10/210 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +    ++    +++        + +    +  K D   K  +   E              
Sbjct: 1191 KIRRDLNDDLETLRTEYLEAADKTAISLEIQKKKDEELKELKRALESANSVNDAKAEELK 1250

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            + +   I  +   ++ +      +   +  ++ + + L A L++ Q          ++  
Sbjct: 1251 QKYQKQIEELDEQVEQQKRLRSQVEKTKNSVDIEKATLAAELAAVQAAKAEADKKRKQAE 1310

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI---SRDLE 267
            ++  +LN +   +  +   L +++ + +  L  + +  +E     +   ++I    R L 
Sbjct: 1311 MACMELNARMAELDSAKSALTQHLAKAQTELDSVVKQKEEDEQTVSALQRKITLLERQLA 1370

Query: 268  QNQRTFADE-------MSKLTILEKTREQK 290
              Q     E        +++  LE    + 
Sbjct: 1371 DTQDQLQGETRSKLAMQTRVRELEDDLSES 1400


>gi|308049011|ref|YP_003912577.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
 gi|307631201|gb|ADN75503.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
          Length = 364

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 64/214 (29%), Gaps = 26/214 (12%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             V Q+ L    R   +   +LR          R  N +      +        S +L++
Sbjct: 92  QLVEQSQLLVTLRD-AEQQAKLRAAQANLTEHQREFNRIEGLVRSKTI-----ASNELDK 145

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
                    ++L   +   + + + +P +G ++  +  S          +  +     L 
Sbjct: 146 IVTDIDIARAQLAQYQAELDARYVRAPFSG-VLGFRQISPGALVTPGTAIATL---DDLA 201

Query: 329 YIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
            ++    V  + +  +  G         + D R   FK  +  +D  I+ Q         
Sbjct: 202 VVKLDFTVPERFLSQLTPGKPVEGLAAAFPDER---FKGTVVSVDSRINPQT-------- 250

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                 +      + ++ LR G    +   A+  
Sbjct: 251 ---RAVVVRAEVDNRDLRLRPGMLMTLKLIAEER 281



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 40/119 (33%), Gaps = 3/119 (2%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR---CHIDTEKSALDFLNNK 123
           ++K   E+G  + Q   L+T  D E    +   + ++   +     I+    +    +N+
Sbjct: 83  VQKVHFEDGQLVEQSQLLVTLRDAEQQAKLRAAQANLTEHQREFNRIEGLVRSKTIASNE 142

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            D +    +    QL  +  +  +   +    G+    +     L    +      DL 
Sbjct: 143 LDKIVTDIDIARAQLAQYQAELDARYVRAPFSGVLGFRQISPGALVTPGTAIATLDDLA 201


>gi|307721238|ref|YP_003892378.1| secretion protein HlyD family protein [Sulfurimonas autotrophica
           DSM 16294]
 gi|306979331|gb|ADN09366.1| secretion protein HlyD family protein [Sulfurimonas autotrophica
           DSM 16294]
          Length = 385

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 75/209 (35%), Gaps = 7/209 (3%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
           LK    ++ S   ++   E    + + +L+  ++D    + L++  ++ +      +  +
Sbjct: 120 LKKAQAQLVSAKASQKSSEQNILIQKDVLAQAKRDFKRAQKLYKTKSIEKQKFELAKLKL 179

Query: 224 YKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
              T +L     ++K +     + ++           L  IS ++   +       +   
Sbjct: 180 DTQTNKLNVLHEQRKEVKSAVKLAKIGLTDAQASQQKLLSISANINALKDGIKALKASKA 239

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
            ++   ++ T+ S + G  V  +  +         P+  ++      Y++  +   +   
Sbjct: 240 QVKAMIDEMTLRSSVNGVTVE-KIANEGEVIGSGMPIATLL-DPHSLYLKIFIDTIENGK 297

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKI 370
           +K G  A +    Y D      +A + +I
Sbjct: 298 IKVGDRAVIFLDAYPDQ---PIEAKVVRI 323


>gi|297717434|ref|XP_002834946.1| PREDICTED: hypothetical protein LOC100447837, partial [Pongo
           abelii]
          Length = 641

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/205 (10%), Positives = 68/205 (33%), Gaps = 4/205 (1%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E  + +  +K  +      +  ++     L  +    E+    +EEQ+     +      
Sbjct: 95  ELEEQMQKQKEQMWKQEEQVWKQEEQRPKLEEQMRKQEEQMRKQEEQMRKQEEQMRKQEE 154

Query: 151 KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
           +++     +      +  +  +MR       +LE +       +   ++ +   +    K
Sbjct: 155 QMWKQEEQMRKQEEQMWKQEEQMRKQEKELRELEKQMRKQEEQMRKQEEQMRKKEEQMRK 214

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL--EFANYLKEISRDL 266
                  L++  R   +   +  E + +Q+  +R   ++  +     E    +++    +
Sbjct: 215 QEEQMMMLDEPMRKQEEQMRKHEEQMRKQEEQMRKEEQMRKQEEQRPELEEQMRKQEEQM 274

Query: 267 EQNQRTFADEMSKLTILEKTREQKT 291
            + +     +  +L  LEK   +  
Sbjct: 275 RKQEEQMRKQEKELRELEKQMRKNE 299



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 15/182 (8%), Positives = 55/182 (30%), Gaps = 1/182 (0%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +  ++ +     +      + +R   +      + +  +   L +  +   +Q      +
Sbjct: 142 MRKQEEQMRKQEEQMWKQEEQMRKQEEQMWKQEEQMRKQEKELRELEKQMRKQEEQMRKQ 201

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 K            +  +  R +   + + + + +    +       +     + 
Sbjct: 202 EEQMRKKEEQMRKQEEQMMMLDEPMRKQEEQMRKHEEQMRKQEEQMRKEEQMRKQEEQRP 261

Query: 205 -LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L E+    +  + +QE  + K   ELRE   + +     + E+ ++         +   
Sbjct: 262 ELEEQMRKQEEQMRKQEEQMRKQEKELRELEKQMRKNEEQMGEVEEQMWKRRRQDERLRL 321

Query: 264 RD 265
           ++
Sbjct: 322 KE 323



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 48/130 (36%), Gaps = 3/130 (2%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +   L  +  +MR       + E K       +   +K+L   + L E+    +  + +Q
Sbjct: 54  LEERLWQQEKQMREEEDKMREQEEKMWRQEEKMWKQEKEL---RELEEQMQKQKEQMWKQ 110

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E  V+K   +  +   + +     + +  ++   +     K+  +  +Q ++    E   
Sbjct: 111 EEQVWKQEEQRPKLEEQMRKQEEQMRKQEEQMRKQEEQMRKQEEQMWKQEEQMRKQEEQM 170

Query: 280 LTILEKTREQ 289
               E+ R+Q
Sbjct: 171 WKQEEQMRKQ 180


>gi|254671825|emb|CBA03959.1| putative chromosome partition protein [Neisseria meningitidis
           alpha275]
          Length = 1161

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 74/198 (37%), Gaps = 25/198 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +   EQ      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSL--AAADKATEQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E           Y++E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENEL--------YVEEKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKT 286
                A+   +L  LE+T
Sbjct: 359 WAMQVAEHEERLPELEET 376


>gi|300777730|ref|ZP_07087588.1| RND family efflux transporter MFP subunit [Chryseobacterium gleum
           ATCC 35910]
 gi|300503240|gb|EFK34380.1| RND family efflux transporter MFP subunit [Chryseobacterium gleum
           ATCC 35910]
          Length = 353

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 66/213 (30%), Gaps = 23/213 (10%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L ++   S+    Q    + +  +E+     +       I+    E   +     K+   
Sbjct: 85  LVKEG--SRVGAGQVLATIKRDAIEVDVTQAQNNLQNAIIDNQRYENAYKTGGVTKQ--- 139

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            L+ ++    +  + +          +I + I+GTI                 + +IV  
Sbjct: 140 QLDNSRLQLKNAQAAVKAQGVKVNDTSIRAGISGTINKKMV-EPGTVVSPGTAMFEIVNI 198

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +    +   V   QI  ++ G    ++      + E  F   I  I P      N     
Sbjct: 199 NS-LKLSVLVDESQIGKIQLGQEVPIKV---NVLPEDSFVGRITFIAPKSDASLN----- 249

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
             + V +++       N   L+ G  A   F+ 
Sbjct: 250 --FPVEIEV------QNKGNLKAGMYATAKFST 274



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           I+   S++G  + +  +   +S   SG I    V+ GS++  G  L T       D I++
Sbjct: 55  IDTDYSANGTFIPKQEMN--QSSEISGRIVNVLVKEGSRVGAGQVLATI----KRDAIEV 108

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                +N   +   +    +       V ++  ++   QL +      +   KV +  I 
Sbjct: 109 DVTQAQNNLQNAIIDNQRYENAYKTGGVTKQQLDNSRLQLKNAQAAVKAQGVKVNDTSIR 168

Query: 159 S 159
           +
Sbjct: 169 A 169


>gi|170748822|ref|YP_001755082.1| RND family efflux transporter MFP subunit [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655344|gb|ACB24399.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           radiotolerans JCM 2831]
          Length = 308

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 55/159 (34%), Gaps = 10/159 (6%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           + +++   I+GL  W     ++   +  G +  +  VV +    SG++ +  VE+   + 
Sbjct: 15  LGMVAAALIVGLGLWDYY--MDAPWTRDGRVRAD--VVAVAPDVSGLVTEVLVEDNQVVR 70

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHID------TEKSALDFLNNKYDVLEKAFES 133
           +G  L   +       +   +  ++N +   +         S L         +E A  +
Sbjct: 71  KGDVLFRIDPDRFRLGLRQAEAMVQNRKATAEQNAADYARYSRLSDAAVSQQKVEAAKAA 130

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
                  +            N   S+V  S+  ++T M 
Sbjct: 131 DLSAEAAYEQALADRDLAKLNLERSAVRASVNGRITNME 169



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 54/158 (34%), Gaps = 8/158 (5%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L Q E +V        +N  +     R  +    +  +E A    ++S +    Q  
Sbjct: 84  RLGLRQAEAMVQNRKATAEQNAADYARYSRLSDAAVSQQKVEAAKA-ADLSAEAAYEQAL 142

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
              +++KL       E+  + + + G I   +      Y    + +M ++  S    I  
Sbjct: 143 ADRDLAKLN-----LERSAVRASVNGRITNMELR-PGAYVTTGRGVMALI-DSDTLRIEG 195

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                ++  ++ G   TV+      +   +  +I   I
Sbjct: 196 YFEETKLPRIRVGAPVTVQLMGEDGVLSGRVASIAGGI 233


>gi|126308751|ref|XP_001371653.1| PREDICTED: similar to myosin, heavy polypeptide 3, skeletal muscle,
            embryonic, [Monodelphis domestica]
          Length = 1939

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 81/229 (35%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   L+  ID   S ++ ++     LEK   + E+Q+ +   K 
Sbjct: 1207 QIDNLQRVKQKLEKEKS--ELKLEIDDLASNVESVSKSKANLEKICRTLEDQISESRSKT 1264

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              T   +                + R L+ K + +  +  ++     +   L+  L    
Sbjct: 1265 EETQRSLNELTAQKARLQTESGELSRQLEEKESIVSQLSRSKQAFTQQIEELKRQLEEET 1324

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  + +    + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1325 KAKNALAHGLQSSRHDCDLLREQYEEEQEAKAELQRALSKANSEVAQWRTKYETDAIQRT 1384

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1385 EELEEAKKKLAQRLQDAEEQVEAVNAKCASLEKTKQR--LQGEVEDLII 1431



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 63/159 (39%), Gaps = 9/159 (5%)

Query: 114  KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            K   +FL  + D+ E     + E ++  L K H+  +   +  I ++ R  +        
Sbjct: 1167 KREAEFLKLRRDLEEATL--QHEAMVATLRKKHADSTAELSEQIDNLQRVKQKLEKEKSE 1224

Query: 174  IYLNRLDLEN-------KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
            + L   DL +         + L  +  + +  ++  ++  E+   S N+L  Q+  +   
Sbjct: 1225 LKLEIDDLASNVESVSKSKANLEKICRTLEDQISESRSKTEETQRSLNELTAQKARLQTE 1284

Query: 227  TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            + EL   + E+++++  ++        +     +++  +
Sbjct: 1285 SGELSRQLEEKESIVSQLSRSKQAFTQQIEELKRQLEEE 1323



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 79/213 (37%), Gaps = 10/213 (4%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  +D         ++++I   R ++   +  ++ L    +  E+A +  E++LLD    
Sbjct: 1656 LHLDDALRGQEDLKEQLAIVERRANL--LQVEVEELRAALEQTERARKLAEQELLD---- 1709

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              +   ++ +   +S+  + K     +  +     D    +            D  +M  
Sbjct: 1710 -SNERVQLLHTQNTSLIHTKKKLEADVSQLQSEVEDASRDARNAEEKAKKAITDAAIMAE 1768

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
              +K   +   L + ++ + ++  +L+  + E + +         +   +    ++E+  
Sbjct: 1769 ELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALK---GGKKQIQKLETRIRELEF 1825

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +LE  Q+   + +  L   E+  ++ T  S   
Sbjct: 1826 ELEGEQKRNTESVKGLRKYERRVKELTYQSEED 1858



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 75/212 (35%), Gaps = 16/212 (7%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             + L + SI +L          L   + +Y  L+   E  +   L F  K     +++  
Sbjct: 1059 DLKLAQESILDLENDKQQLDERLKKKDFEYSQLQSKLEDEQTLGLQFQKKIKELQARIEE 1118

Query: 155  YGISSVYRSL-KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT---------MMKN 204
                       + K  + RS Y   L+  ++       ++S Q +L          + ++
Sbjct: 1119 LEEEIEAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFLKLRRD 1178

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS- 263
            L E     +  +    +    ST EL E I   + + + + +   E  LE  +    +  
Sbjct: 1179 LEEATLQHEAMVATLRKKHADSTAELSEQIDNLQRVKQKLEKEKSELKLEIDDLASNVES 1238

Query: 264  -----RDLEQNQRTFADEMSKLTILEKTREQK 290
                  +LE+  RT  D++S+     +  ++ 
Sbjct: 1239 VSKSKANLEKICRTLEDQISESRSKTEETQRS 1270



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 74/215 (34%), Gaps = 17/215 (7%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            L  +  +    ++      +N         T+ + +     K        E  ++ L   
Sbjct: 1731 LEADVSQLQSEVEDASRDARNAEEKAKKAITDAAIMAEELKKEQDTSAHLERMKKNLEQT 1790

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            +        +     +    + ++   TR+R +     +LE +       +   +K    
Sbjct: 1791 VKDLQHRLDEAEQLALKGGKKQIQKLETRIRELEF---ELEGEQKRNTESVKGLRKYERR 1847

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +K L  ++   + ++ + + +V K  +++       K+  R   E  ++AN+    + K 
Sbjct: 1848 VKELTYQSEEDRKNVQRLQDLVDKLQVKV-------KSYKRQAEEADEQANVHLTKFRK- 1899

Query: 262  ISRDLEQNQRT---FADEMSKLTILEKTREQKTIL 293
               +LE+ +        +++KL    +      ++
Sbjct: 1900 AQHELEEAEERADIAESQVNKLRAKTRDITSTRVV 1934


>gi|154243721|ref|YP_001409294.1| secretion protein HlyD family protein [Xanthobacter autotrophicus
           Py2]
 gi|154162843|gb|ABS70058.1| secretion protein HlyD family protein [Xanthobacter autotrophicus
           Py2]
          Length = 332

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/297 (10%), Positives = 89/297 (29%), Gaps = 19/297 (6%)

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              L +A    E + +D   KY    ++V     + V +   +       I         
Sbjct: 36  PAGLARANGRIEVERVDIATKYAGRLAEVRVNEGADVQKDGILARIDTTEILAQLAAARA 95

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                   +++ Q ++ +     +   V    + +  R    +  EL     ++      
Sbjct: 96  AVHRSHQGVATAQSNVALRSAELKLAEVELRRIVELMRTNTATQAELDRRTAQRDISKAS 155

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           ++                    +E  +      +++++ +E      T+ +P++G +   
Sbjct: 156 LDSAIV---------------AIEDAKAAVEAAVAQVSQIEAAIADMTLKAPVSGRV-EY 199

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +   +         ++ ++  S   ++   +   Q+  V+ G  A ++     D      
Sbjct: 200 RLAQAGEVVAAGGRVLTLLDLSD-VHMTIFLPTSQVGGVELGADARIKLDGAPDYIVPAT 258

Query: 364 KAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            A +        +  +  N + +  Y + L I           ++ G   +     +
Sbjct: 259 VAFVASEAQFTPKYVETANEREKLMYRIKLHIDPKLLETYRAYVKAGMTGDAYVKVE 315



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 51/153 (33%), Gaps = 4/153 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
                ++G I  E   V+I + ++G + + +V  G+ + +   L   +  E    +   +
Sbjct: 37  AGLARANGRIEVE--RVDIATKYAGRLAEVRVNEGADVQKDGILARIDTTEILAQLAAAR 94

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            ++      + T +S +   + +  + E       E +            +     IS  
Sbjct: 95  AAVHRSHQGVATAQSNVALRSAELKLAEVELRRIVELMRTNTATQAELDRRTAQRDISK- 153

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             SL   +  +            + S + A ++
Sbjct: 154 -ASLDSAIVAIEDAKAAVEAAVAQVSQIEAAIA 185


>gi|116050377|ref|YP_790806.1| hypothetical protein PA14_33220 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254235441|ref|ZP_04928764.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|115585598|gb|ABJ11613.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126167372|gb|EAZ52883.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
          Length = 334

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 92/263 (34%), Gaps = 34/263 (12%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI--HEQKNML 241
           +   L   +   + +L +++     N V++  L +    +  S  +LR+     ++++ L
Sbjct: 69  EKGALLLSIDPARYELAVLRAERAVN-VARAALGESRAAIEASQAQLRQRRSEAQRRSAL 127

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTF-------ADEMSKLTILEKTREQKTILS 294
           +  + L  E N +    +     +L +NQ +            + L       E+  + +
Sbjct: 128 QKRSMLSVEENEKAQTDVSLAQAELLRNQASLGLAQANVELAEAALQQARLDLERTQVRA 187

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P++G +   Q+    +YA    PL+ +V      Y+       ++  ++ G  A V    
Sbjct: 188 PVSGYVTNLQTR-EGDYAHAGVPLLALV-DRDSFYVSGYFEETKLPGIRVGSRARVELMS 245

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQT------QEYYE---------VILKITDLAFS 399
                 ++F   ++ I   I+ ++N   +         Y          V + I      
Sbjct: 246 -----GERFDGRVQSIAHAITDRENAEGSRLLANINPSYTWVKLAQRIPVRIAIDPAYRQ 300

Query: 400 DNNIELRNGFPAEVLFTAKNTTL 422
            N   LR G  A +       T 
Sbjct: 301 RN--TLRAGVTATIRVLPAEDTA 321



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 50/145 (34%), Gaps = 2/145 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV + +  SG+I +  + +   + +G  LL+ +       +   + ++   R  + 
Sbjct: 42  VRADVVTLSADVSGLITRLPLSDNQPVEKGALLLSIDPARYELAVLRAERAVNVARAALG 101

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++A++   ++  + ++  E++    L          ++     +S     L      +
Sbjct: 102 ESRAAIE--ASQAQLRQRRSEAQRRSALQKRSMLSVEENEKAQTDVSLAQAELLRNQASL 159

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQ 196
                N    E      R  L   Q
Sbjct: 160 GLAQANVELAEAALQQARLDLERTQ 184


>gi|317487002|ref|ZP_07945810.1| efflux transporter [Bilophila wadsworthia 3_1_6]
 gi|316921684|gb|EFV42962.1| efflux transporter [Bilophila wadsworthia 3_1_6]
          Length = 402

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 8/134 (5%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIK--SPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
            +  I  +V+++GE+     V  +   +   G IKK  V  G  + +G  +   + +   
Sbjct: 39  TIGNITRTVNATGEV---GAVQLVSVGAQVGGQIKKLHVVLGQDVKKGDLIAEIDSVPQL 95

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV---LEKAFESREEQLLDFLGKYHSTCS 150
           + ++  K  +++    +  +K AL     KYD    L+K   + +E L D    Y    +
Sbjct: 96  NQLETDKARLQSYESQLAAKKVALKIAKTKYDREMQLKKRDAASKESLEDAENAYALAKA 155

Query: 151 KVFNYGISSVYRSL 164
           +V           +
Sbjct: 156 EVTELESQIRQARI 169



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 60/165 (36%), Gaps = 6/165 (3%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + +    K  L++ +  ++++  L+  +    E+  +  N       ++ + +       
Sbjct: 109 ESQLAAKKVALKIAKTKYDREMQLKKRDAASKESLEDAENAYALAKAEVTELESQIRQAR 168

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV--PHSKLTYIRAKVT 335
             +   E       I +P+ GTIV             +Q    IV         I+ +++
Sbjct: 169 IAVNTDEVNLGYTRITAPLDGTIVSVPVD-EGQTVNANQTTPTIVQIADLDKMEIKIEIS 227

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
              I  VK G    + +   ++    ++KA +  IDP ++   + 
Sbjct: 228 EGDITAVKPGMP--ITYTILSNPET-EYKATLTSIDPGLTTLTDG 269


>gi|302382597|ref|YP_003818420.1| efflux transporter RND family, MFP subunit [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302193225|gb|ADL00797.1| efflux transporter, RND family, MFP subunit [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 401

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 65/220 (29%), Gaps = 25/220 (11%)

Query: 208 KNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRHINELYDEANLEFANYLKEI---- 262
              +++      +R+   + L +L+    E   +         E   E    L E     
Sbjct: 95  SQLITRVLFRDGQRVAAGTPLVQLQAGEEEAGIIEARARVGLAETQYERYAALGEQGYAP 154

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              +EQ +   A   + L      +   +I +P AGT +   + ++         +  + 
Sbjct: 155 RMMVEQYRAELATARATLQAALARQGDLSIRAPFAGT-LGLSTVTAGTLISPGAVITTL- 212

Query: 323 PHSKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
                + IR    V  + +  ++ G + T     Y + +   F   I  +D  I++    
Sbjct: 213 --DDTSVIRVDFPVPERYLGVLRSGLSITATADAYGNEQ---FSGRIALVDTRINETT-- 265

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                            F +    +R G    V       
Sbjct: 266 ---------RAVTARAEFPNPGGRIRPGMLMRVAIQQGQR 296


>gi|116062141|dbj|BAF34701.1| fast skeletal myosin heavy chain isoform mMYH-1 [Oryzias latipes]
          Length = 1937

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 80/199 (40%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++   + ++  N+    L+K   + ++ L ++  KY  + +++   G  
Sbjct: 1417 LEKTKQRLQGEVEDLMTDVERANSLAANLDKKQRNFDKVLAEWKQKYEESQAEL--EGAQ 1474

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   ++    + Q++++ +     +   S ++L +
Sbjct: 1475 KEARSLSTELFKMKNSYEEALD---QLETMKRENKNLQQEISDLTEQLGETGKSIHELEK 1531

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      EI R L +          
Sbjct: 1532 AKKTVETEKCEIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKLAEKDEELEQIKR 1591

Query: 278  --SKLTILEKTREQKTILS 294
               ++    ++     + S
Sbjct: 1592 NSQRVIESMQSTLDAEVRS 1610



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 80/217 (36%), Gaps = 15/217 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1209 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEGVAKSKGNLEKMCRTLEDQLSELKAKN 1266

Query: 146  HSTCSKV--FNYGISSVY-------RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++   N   + +        R L  K   +  +  ++     +   L+  +    
Sbjct: 1267 DENVRQLNDLNAQRARLQTENGEFARQLDEKEALVSQLTRSKQAFTQQIEELKRQVEEEV 1326

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD----EAN 252
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+    +  
Sbjct: 1327 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1386

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E     K++++ L++ + +     SK   LEKT+++
Sbjct: 1387 EELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQR 1423



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K   I  L   I+ E+S    L  K   L+   
Sbjct: 1059 EGDLKLAQESIMDLENDKQQSDEKIKKKDFEISQLLSKIEDEQSLGAQLQKKIKELQARI 1118

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1119 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATSAQIEMNKKREA---- 1172

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1173 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1227

Query: 252  NLEFANYLKEIS------RDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +    +        +LE+  RT  D++S+L        ++
Sbjct: 1228 KMEIDDLSSNMEGVAKSKGNLEKMCRTLEDQLSELKAKNDENVRQ 1272


>gi|90423496|ref|YP_531866.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90105510|gb|ABD87547.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 304

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/232 (12%), Positives = 71/232 (30%), Gaps = 24/232 (10%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRH---INELYDEANLEFANYLKEISRDLEQNQR 271
            ++Q    +   T E + +  +    + +   +              L+++   ++Q + 
Sbjct: 77  RIDQARYRLAMKTAEAKADSSKAALDMANHDLVRYRQLSDTTVTRQKLEQVDTTMQQTEA 136

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           T+        +     E+ ++ +P+ G +         +Y       + +V  +    + 
Sbjct: 137 TYRQAQLDRDLAALNLERSSVKAPVDGIVTNLSIH-PGDYLAAGAQAVALV-DTASLRME 194

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ------- 384
                 +++ V  G  A +R          + ++I   I         NL  +       
Sbjct: 195 GYFEETKLRRVSIGDRAKIRLMGEDAEITGRVESIAAAIADDQRDDTRNLLPKVVPTFSW 254

Query: 385 ----EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPITD 432
               +   V ++I         I L  G  A V     ++T       P+ D
Sbjct: 255 VRLAQRIPVRIRIDP---RPMGIRLIVGRTATVEIIPASST-----TSPVVD 298



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 20/184 (10%), Positives = 53/184 (28%), Gaps = 8/184 (4%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG++ +  V +  ++  G  +   +       +   +    + +  +D     L      
Sbjct: 55  SGLVSQVLVHDNEEVHAGDVIFRIDQARYRLAMKTAEAKADSSKAALDMANHDLVRYRQL 114

Query: 124 YDV------LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            D       LE+   + ++    +            N   SSV   +   +T +     +
Sbjct: 115 SDTTVTRQKLEQVDTTMQQTEATYRQAQLDRDLAALNLERSSVKAPVDGIVTNLSIHPGD 174

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEK--NAVSQNDLNQQERIVYKSTLELRENIH 235
            L    ++  L    S   +       L        ++  L  ++  +      +   I 
Sbjct: 175 YLAAGAQAVALVDTASLRMEGYFEETKLRRVSIGDRAKIRLMGEDAEITGRVESIAAAIA 234

Query: 236 EQKN 239
           + + 
Sbjct: 235 DDQR 238


>gi|14009350|gb|AAK50339.1| emm type protein precursor [Streptococcus pyogenes]
          Length = 471

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 90/227 (39%), Gaps = 10/227 (4%)

Query: 68  KKFQVENGS-QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           K  ++ENG  +   G      ++    +L + ++ S +N +   +  +  +     K   
Sbjct: 159 KTLKIENGELKTENGDLTKKLDETR-QELANKQQESKENEKTLNELLEKTVKDKIAKEQK 217

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            ++ F + E++L           +K+ +     + R L       + +      LE ++ 
Sbjct: 218 SKQDFGALEQELAK-----KEEQNKISDASRQGLRRDLDASREAKKQLEAEHQKLEEQNK 272

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           +  A     ++DL   +   ++       L +Q +I   S   LR ++   +   + + +
Sbjct: 273 ISEASRKGLRRDLDASREAKKQLEAEHQKLEEQNKISEASRKGLRRDLDASREAKKQVEK 332

Query: 247 LYDEANLEFA---NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +EAN + A   N  KE+   ++  ++  A+  +KL    K  +++
Sbjct: 333 ALEEANSKLAALENLNKELEESMKLTEKEKAELQAKLEAEAKALKEQ 379



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 57/169 (33%), Gaps = 11/169 (6%)

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
             +N +    +  ++      L+         ++      + +        +  +++   
Sbjct: 42  AEVNTRSRAQDAGYQKGRADKLETENHGLKFQNEKLQNQNNDLKTQTATLTSENKTLQGQ 101

Query: 178 ----RLDLENKSSLLRALLSSHQKDLTMMKNLFEKN---AVSQNDLNQQERIVYKSTLEL 230
               + +LE +    +AL     +     K L ++       +  L +Q +    +   L
Sbjct: 102 VAAGQKELEEQKEQNKALEKKAAEKEQDNKALRQRGDTLFNQRVRLEKQVQEKEHNNKTL 161

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +    E K     + +  DE   E AN  +E     ++N++T  + + K
Sbjct: 162 KIENGELKTENGDLTKKLDETRQELANKQQES----KENEKTLNELLEK 206


>gi|121729915|ref|ZP_01682339.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|121628340|gb|EAX60845.1| conserved hypothetical protein [Vibrio cholerae V52]
          Length = 361

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 21/206 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S   + + + +V   +   R N+   +  L      Y+     FA          ++ + 
Sbjct: 80  SGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKG-SISKESYDEAEA 138

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           ++    + +  L+ T  ++ I +P AG I     F    Y Q       IV     + +R
Sbjct: 139 SYYALSADIESLKATIARREIKAPFAGVIGIRNVF-LGQYLQPGT---DIVRLEDTSVMR 194

Query: 332 AK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
            +  V  + I  +       +    Y       FK  I  I+P +S Q   +Q Q     
Sbjct: 195 LRFTVPQRDISRISLDQEVDIFVDAYPQT---SFKGSISAIEPAVSVQSGLIQVQ----- 246

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
                     +++ +LR+G  A    
Sbjct: 247 ------ADIPNSDGKLRSGMFARANI 266



 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 52/138 (37%), Gaps = 1/138 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +   E+G+Q+ +  PL+  +       +   +  +   +   +  K      +   
Sbjct: 71  GVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKGSISK 130

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  ++A  S      D      +   +      + V     + L +      + + LE+ 
Sbjct: 131 ESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLED- 189

Query: 185 SSLLRALLSSHQKDLTMM 202
           +S++R   +  Q+D++ +
Sbjct: 190 TSVMRLRFTVPQRDISRI 207


>gi|326936457|ref|XP_003214270.1| PREDICTED: LOW QUALITY PROTEIN: myosin-XVIIIa-like [Meleagris
            gallopavo]
          Length = 1902

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 71/191 (37%), Gaps = 10/191 (5%)

Query: 87   FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY- 145
             E  +     +L +   +  R  +  EK     L+ + DVL     S ++ L D      
Sbjct: 1381 LEKKQRRFDGELSQAHEEAQRERLQREK-----LSREKDVLVAEVFSLKQLLEDKDADIA 1435

Query: 146  -HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              +  ++     +  +          +  +     DLE K+      L      + M++ 
Sbjct: 1436 GLTQRAEALEAELQDISCQESKDEASLAKVKXQLRDLEAKAKDQEEELDEQAGTIQMLEQ 1495

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            + +     Q  L Q E  + +   + ++ + E++ +   ++ + D+AN       K + R
Sbjct: 1496 IRQS---CQKKLKQMEMQLEEEYEDKQKVLREKRELESKLSAVNDQANQRDFETEKRLRR 1552

Query: 265  DLEQNQRTFAD 275
            DL++ +   AD
Sbjct: 1553 DLKRTKALLAD 1563



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 84/218 (38%), Gaps = 31/218 (14%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            ++      L  +D      +   K +++     +  EK+           ++   E  +E
Sbjct: 1606 EVEIEDLHLQIDD------LSKAKAALEEQLSRLQREKNE----------VQSRLEEDQE 1649

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             + + + K+ +  ++            +     ++  +   + +L+ K   L++ L   +
Sbjct: 1650 DMNELMKKHKAAVAQASRD-----LAQMNDLQAQLEEVSKEKQELQEKLQGLQSQLEFLE 1704

Query: 197  KDLTMMKNLFEKNAVSQND--LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
                  +++ +K+ VS+ +  + + E  +     +++        +  ++ +L +E +  
Sbjct: 1705 ------QSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLATRLKENMEKLTEERDQR 1758

Query: 255  FA--NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             A  N  KE ++ L++  R   +EM +L   E    +K
Sbjct: 1759 AAAENREKEQNKRLQRQLRDVKEEMGELAKKEAEASRK 1796



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 81/227 (35%), Gaps = 20/227 (8%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             ++ +    L              +  I  L   +  E++  +  +   D         E
Sbjct: 1196 EKVEKERNELRLNSDR-------LESRITELTSELTDERNTGESASQLLDAETAERLRAE 1248

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +++ D   KY +   ++ +  +  +   L        +     LD ++     R      
Sbjct: 1249 KEMKDLQAKYDALKKQMESMEMEVMEARLIRA-----AELNGELDDDDSGGEWRLKYERA 1303

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             +++   K   ++    + ++ QQ +R + +   +L+ +  E +  L+ + +       E
Sbjct: 1304 VREIDFTKKRLQQELEDKLEVEQQGKRQLERRLADLQADGEESQRALQQLKKKCQRLAAE 1363

Query: 255  FANY------LKEISRDLEQNQRTFADEMSKL-TILEKTREQKTILS 294
              +        +  + DLE+ QR F  E+S+     ++ R Q+  LS
Sbjct: 1364 LQDTKLHLEGQQGRNHDLEKKQRRFDGELSQAHEEAQRERLQREKLS 1410



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 68/180 (37%), Gaps = 8/180 (4%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ-LLDFL 142
            L    D++    ++      + L+  +   +S L+FL  +  +++K+  SR+E  + +  
Sbjct: 1669 LAQMNDLQ--AQLEEVSKEKQELQEKLQGLQSQLEFL--EQSMVDKSLVSRQEAKIRELE 1724

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TM 201
             +     ++V    + S+   LK  + ++      R   EN+       L    +D+   
Sbjct: 1725 TRLEFERTQV--KRLESLATRLKENMEKLTEERDQRAAAENREKEQNKRLQRQLRDVKEE 1782

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            M  L +K A +    ++ E  +       +    + K   + I +L      E  +   E
Sbjct: 1783 MGELAKKEAEASRKKHELEMDLESLEAANQSLQSDLKLAFKRIGDLQAAIEDEMESDSNE 1842


>gi|323164817|gb|EFZ50609.1| hlyD family secretion family protein [Shigella sonnei 53G]
          Length = 355

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQSELDSVAKRHTRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|319791600|ref|YP_004153240.1| hemolysin D [Variovorax paradoxus EPS]
 gi|315594063|gb|ADU35129.1| secretion protein HlyD family protein [Variovorax paradoxus EPS]
          Length = 303

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 62/218 (28%), Gaps = 24/218 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + D  + +  V ++   L         + R          L      ++    LEQ +  
Sbjct: 84  EVDRARYDLAVRQAQAALSAQRAASAQVQRENARNAGLDELVSKEAREQTRSRLEQMRAA 143

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A     L       ++  + +P  G +         +YA   +P++ +V  ++  Y+  
Sbjct: 144 VAQAEVALDSARLNLQRAQVRAPADGLVTNLDLR-QGSYAAAGRPVLALV-DAQSFYVEG 201

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-------- 384
                ++  +  G    V             +  ++ +   I+ +D +            
Sbjct: 202 YFEETKLPRIHLGDRVRVT----PMGGGAVLEGAVDSVAAGIADRDRSTSANLLPSVNPT 257

Query: 385 -------EYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                  +   V +K+  L        L  G    V  
Sbjct: 258 FNWVRLAQRIPVRVKLDPL---PEGARLVAGQTVTVQV 292



 Score = 39.6 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 60/173 (34%), Gaps = 5/173 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NVV+I    SG++    +++   +  GT L   +       +   + ++   R    
Sbjct: 50  VRANVVQIAPDVSGLVTAVPIQDNQSVAAGTLLFEVDRARYDLAVRQAQAALSAQRAASA 109

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +          +++ K      EQ    L +  +  ++      S+     + ++   
Sbjct: 110 QVQRENARNAGLDELVSKEA---REQTRSRLEQMRAAVAQAEVALDSARLNLQRAQVRAP 166

Query: 172 RSIYLNRLDLEN--KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
               +  LDL     ++  R +L+        ++  FE+  + +  L  + R+
Sbjct: 167 ADGLVTNLDLRQGSYAAAGRPVLALVDAQSFYVEGYFEETKLPRIHLGDRVRV 219


>gi|294508855|ref|YP_003572914.1| cation efflux system protein CzcB-like protein [Salinibacter ruber
           M8]
 gi|294345184|emb|CBH25962.1| cation efflux system protein CzcB-like protein [Salinibacter ruber
           M8]
          Length = 369

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 71/213 (33%), Gaps = 25/213 (11%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDLEQN 269
               + Q E +   +  +L   + + +     ++     DE  +     ++   R+ +  
Sbjct: 100 PGTRVAQGEVVADVAAPDLSRMVADLRQARSDLDRQRRLDERGVAVEKNVRAAERNWQAA 159

Query: 270 QRTFAD------EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           ++           + ++    +      + +P+ G ++           QQ   L +IV 
Sbjct: 160 RQRLRSIGVRPARIEQVATGAQNMRTLPLEAPLDGIVLNRMGV-LGAPVQQGDTLYRIV- 217

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
             +   + A+V  + +  V+ G  AT+  P    +  + ++  I +I P +  +      
Sbjct: 218 DLQPIRVVARVFEQSLDKVRTGQPATITTP----MAPRSYQGTIGRIIPQVGDESRAAS- 272

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                       +   + +  LR G  A V   
Sbjct: 273 ----------ARIVLDNTDGTLRPGMYASVQVQ 295


>gi|288929879|ref|ZP_06423721.1| efflux transporter, RND family, MFP subunit [Prevotella sp. oral
           taxon 317 str. F0108]
 gi|288328698|gb|EFC67287.1| efflux transporter, RND family, MFP subunit [Prevotella sp. oral
           taxon 317 str. F0108]
          Length = 359

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 59/185 (31%), Gaps = 3/185 (1%)

Query: 34  WSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           W     +     ++   +     +E+++   GI+++  V  G Q+  G PL     +   
Sbjct: 37  WVTNTQVSKDYVAN---IESRKNIEVRAQQEGILQQVYVTEGQQVRAGQPLFRISIVGAQ 93

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +   K   +  R  +    +         +  + A       L D+          + 
Sbjct: 94  QNVARAKAEAEQARIELQNTTTLTRGQIVSPNAQKMAKAKLNAALADYKLAQIQARLCLI 153

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +   + V  SL  K+  +         L + SSL      S  + +   ++  E+N +  
Sbjct: 154 SAPFTGVIGSLSKKIGSLVQGGDLLTTLSDNSSLNVYFNISEPEYIDYQQHSAERNKLPL 213

Query: 214 NDLNQ 218
             +  
Sbjct: 214 TLILA 218


>gi|168206768|ref|ZP_02632773.1| conserved hypothetical protein [Clostridium perfringens E str.
           JGS1987]
 gi|169342872|ref|ZP_02863903.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
 gi|169299129|gb|EDS81201.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
 gi|170661815|gb|EDT14498.1| conserved hypothetical protein [Clostridium perfringens E str.
           JGS1987]
          Length = 376

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 51/133 (38%), Gaps = 1/133 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V  +G+I  E           G + K +VENG  + +G  L T+++ +    ++  ++ +
Sbjct: 48  VFVNGKIEPEKVENIFLDATKGTVDKVEVENGDVVEKGDTLFTYKNDQVQSQVEQLELQL 107

Query: 104 KNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            + +    +  K   +      D+ +   E++  Q         +   ++    +    +
Sbjct: 108 NSAKSQKEEINKQNAEAKKQLEDLKKAGLENQMPQGGQMPNLGQNAGGEISTGSVDEQIK 167

Query: 163 SLKMKLTRMRSIY 175
            L+ ++  ++   
Sbjct: 168 LLEKQIKALKDKE 180



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 67/212 (31%), Gaps = 26/212 (12%)

Query: 212 SQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEF--------ANYLKEI 262
           SQ +  + +    KS  E + +   E K  L  + +   E  +           N   EI
Sbjct: 98  SQVEQLELQLNSAKSQKEEINKQNAEAKKQLEDLKKAGLENQMPQGGQMPNLGQNAGGEI 157

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           S      Q      + K     K +E   + +PI G ++  +S +       +QP   I 
Sbjct: 158 STGSVDEQIKL---LEKQIKALKDKEYYKVTAPIGGKVILAESST-----NPTQP--YIT 207

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI-IEKIDPIIS------ 375
             S   YI   V  K    +K+G    +           K  ++    ID  +S      
Sbjct: 208 VESGDYYISGSVNEKDQPKIKEGQEVQITILSTNKNINGKISSVGNTPIDNGVSLAAQTG 267

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            Q        YYEV +         N   ++ 
Sbjct: 268 AQGGAGGNMSYYEVKITPDSQEDLTNGFHVQA 299


>gi|90022093|ref|YP_527920.1| hypothetical protein Sde_2448 [Saccharophagus degradans 2-40]
 gi|89951693|gb|ABD81708.1| Secretion protein HlyD [Saccharophagus degradans 2-40]
          Length = 359

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 94/260 (36%), Gaps = 27/260 (10%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP--------------FS 64
           R+T++ ++  +G+ + S +  ++     +GEI+++ + + IKS                +
Sbjct: 3   RLTIICLLLAVGVFSKSAMAELD---VVTGEIVSQHHDITIKSQGFIVPFQQTTLAAQVT 59

Query: 65  GIIKKF--QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           G +       E G  + +G  L + ++      +   K  +   R  ++ EK   D    
Sbjct: 60  GDVNHISNHFEPGMSVAKGEILFSIDNTNYLAQVAEAKQRMLEARLALEDEKVRADRAKK 119

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR------MRSIYL 176
            + + + + E  E    D          +     +    R L + + R      +++  +
Sbjct: 120 DWRMTQ-STEPNELAGRDLYVDAAQAALEAAESRLQQAKRDLSLTVVRAPYDGVVKTREI 178

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
           +  DL    ++  + + +    L +   L E   +   D  + E         + +++  
Sbjct: 179 SLGDLLMPGAVAGSFIQADVAALELPIRLEELPLIKNIDFLRVELKSVNGGDSISQSVDA 238

Query: 237 QK-NMLRHINELYDEANLEF 255
              ++   +N+   +A L  
Sbjct: 239 YPVSLSADLNKQEQQARLRV 258


>gi|24373446|ref|NP_717489.1| HlyD family-like protein [Shewanella oneidensis MR-1]
 gi|24347730|gb|AAN54933.1|AE015631_9 HlyD family-related protein [Shewanella oneidensis MR-1]
          Length = 360

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 60/187 (32%), Gaps = 22/187 (11%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT--FADEMSKLTILE 284
            L+  E + + K     +++   E     +        +LE+++         ++L   +
Sbjct: 92  QLQNAEQLAKVKVAQVKVSDNQRELARISSLVTSRTVAELERDRLQTLIDTTRAELEQAQ 151

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHV 342
            +   ++I++P  G  +  +  S  +         +I          +   V  + IQ +
Sbjct: 152 SSLNDRSIVAPFNGR-LGLRQVSVGSLVTPGT---EISTLDDISKIKLDFSVPERFIQEL 207

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           + G     +   + D     FK  +  ID  ++                 I      +++
Sbjct: 208 QPGKLVEAKAVAFPDEI---FKGKVISIDSRVNPTT-----------RAVIVRAEIPNHD 253

Query: 403 IELRNGF 409
           + L  G 
Sbjct: 254 LRLLPGM 260



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/86 (10%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI---KNLRCHIDTEKSALDFLNN 122
           ++   + ++G  + +G  L+  ++ E    + + +V +   +     I +  ++      
Sbjct: 72  VVTSLKFDDGDIVKKGDLLVQLQNAEQLAKVKVAQVKVSDNQRELARISSLVTSRTVAEL 131

Query: 123 KYDVLEKAFESREEQLLDFLGKYHST 148
           + D L+   ++   +L       +  
Sbjct: 132 ERDRLQTLIDTTRAELEQAQSSLNDR 157


>gi|311262390|ref|XP_003129142.1| PREDICTED: coiled-coil domain-containing protein 158-like [Sus
           scrofa]
          Length = 1113

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 76/224 (33%), Gaps = 13/224 (5%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G      + L+ FE+     + +   +S  + R         L  L+ +   L+    
Sbjct: 182 HEGVLQEIRSVLVDFEEASGKKIYEHDSMSTLHFRSMGSAISKILRELDTEISYLKGRIF 241

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             E+QL     +  +    +       + + +      +  +        ++++ +++ L
Sbjct: 242 PVEDQLEALKSESQNKMELLLQQHQDRIEQLINEHEIEITGLTEKASSARSQANSIQSQL 301

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-------NIHEQKNMLRHIN 245
              Q+      +++ +       L+  E  V +   ELRE        I E +  L   N
Sbjct: 302 EIIQEQARNQNSMYMR------QLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLAN 355

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               EA  E   + +E     +Q Q+  AD   +   L   +EQ
Sbjct: 356 SELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQ 399



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 72/209 (34%), Gaps = 12/209 (5%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           T  ++  K  ++ +   +  +K  L+        L  + + +E  +     +     S+V
Sbjct: 467 TAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNSEILKLRSRV 526

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                    + LK +   +R +      L+ + +    ++   ++ +  M  L  ++  +
Sbjct: 527 --DLKLQELQHLKNEGDHLRDVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRT 584

Query: 213 ----QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA------NLEFANYLKEI 262
               Q +  + E+ V    LEL+E    +      I EL           ++  N   E 
Sbjct: 585 AGAMQVEKARLEKEVGDRRLELQELKILKDKKDAKIRELEARVSDLELEKVKLVNAGSER 644

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKT 291
            R ++  ++     +S++          T
Sbjct: 645 LRAVKDIKQERDHLLSEVKTSRNELNSLT 673


>gi|290474151|ref|YP_003467028.1| putative transporter [Xenorhabdus bovienii SS-2004]
 gi|289173461|emb|CBJ80240.1| putative transport transmembrane protein [Xenorhabdus bovienii
           SS-2004]
          Length = 368

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 50/140 (35%), Gaps = 7/140 (5%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I  ++ +  EI+    +   +     II +  VE G  + +G  L T E +   + +  
Sbjct: 46  KILGAIVAKNEIVISPALP--QH----IITEVLVEEGDYVKKGEVLATLETLVQDEKVKQ 99

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGI 157
            K  ++     I   ++  +   ++   ++    +      +F   K  +  S       
Sbjct: 100 AKAELEKALALIKQNEAMSNQAQSELKRVKPLVNTGVISASEFDKYKMQANSSSSALNAA 159

Query: 158 SSVYRSLKMKLTRMRSIYLN 177
            + YR L+ +L   ++    
Sbjct: 160 KAEYRQLQAQLEGEKTQRAK 179



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 79/261 (30%), Gaps = 33/261 (12%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             LL  LG   S      N         +     +      +   L    +    ++S  
Sbjct: 3   RNLLSLLGVCFSLFISTANAQSPQEQMHVSTTTMQAVQFTPSIKILGAIVAKNEIVISPA 62

Query: 196 QKDLTMMKNLFEKN-AVSQNDLNQ------QERIVYKSTLELRENIHEQKNMLRHINELY 248
                + + L E+   V + ++        Q+  V ++  EL + +   K      N+  
Sbjct: 63  LPQHIITEVLVEEGDYVKKGEVLATLETLVQDEKVKQAKAELEKALALIKQNEAMSNQAQ 122

Query: 249 DEAN-------------LEFANYLKEI---SRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E                EF  Y  +    S  L   +  +    ++L   +  R + TI
Sbjct: 123 SELKRVKPLVNTGVISASEFDKYKMQANSSSSALNAAKAEYRQLQAQLEGEKTQRAKTTI 182

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-LTYIRAKVTPKQIQHVKKGYTATVR 351
            +P  G I      + +     S  L K++ +++      A ++   ++ +  G  A + 
Sbjct: 183 FAPREGVISE--RTAMAGMITDSSQLFKLIENNQHEFSAEAYISA--LKQINTGIPAAIS 238

Query: 352 FPHYADIREKKFKAIIEKIDP 372
                     K    +  I P
Sbjct: 239 LTS-----GSKITGKVRYISP 254


>gi|262197494|ref|YP_003268703.1| efflux transporter RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
 gi|262080841|gb|ACY16810.1| efflux transporter, RND family, MFP subunit [Haliangium ochraceum
           DSM 14365]
          Length = 424

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 70/204 (34%), Gaps = 22/204 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQN 269
           VS        R +       +         +   N + Y+E   E     ++      + 
Sbjct: 121 VSAGQPLAVLRSIALGEARAQAARARANVDVAQANFKRYEELQREGIGAERQFIEAQAEL 180

Query: 270 QRTFADEMSKLTILE-----KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +R  A++ +    LE         + TI SPIAG ++  +  +       S  L +I   
Sbjct: 181 RRAQAEQSAAERALEVYGRGGRGSEVTIRSPIAGRVLS-RHATVGEIVGPSDVLFEITDI 239

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           S++  +  +V  +    V++G +A +            F+  ++ + P + ++   L   
Sbjct: 240 SRVWAV-GRVYQQHAGQVREGASAALTLQALPGRI---FQGTLDYVAPALDERTRTL--- 292

Query: 385 EYYEVILKITDLAFSDNNIELRNG 408
               V + + +         LR G
Sbjct: 293 ---PVRVSLDNPEGV-----LRPG 308



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 2/133 (1%)

Query: 36  ILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
              P    +    EI  E +    + S  SG + +  V  G ++  G PL     I   +
Sbjct: 78  AAAPATGGLDVPAEIQPEPDREAHVSSIVSGQLARVHVSLGDRVSAGQPLAVLRSIALGE 137

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
                  +  N+           + L  +    E+ F   + +L     +  +    +  
Sbjct: 138 ARAQAARARANVDV-AQANFKRYEELQREGIGAERQFIEAQAELRRAQAEQSAAERALEV 196

Query: 155 YGISSVYRSLKMK 167
           YG       + ++
Sbjct: 197 YGRGGRGSEVTIR 209


>gi|303245868|ref|ZP_07332150.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
 gi|302492651|gb|EFL52519.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
          Length = 316

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 109/304 (35%), Gaps = 22/304 (7%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV----FNYGISSVYRSLKMKLTR 170
           +     + K    ++  +S     ++F GK +S         +N  I+++   +  ++ R
Sbjct: 22  AQDKAPDGKQPAKQETPDSFRPATINFSGKLYSPVKLSVFLPYNAKITALSGKIGQQVKR 81

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
              +    + LE +      L  ++ K++     + +K      ++++      +     
Sbjct: 82  DDILARYEIPLETRMDEKTKLSPANIKEIEYKIAMADK------EIDRLSAKAKELQAMS 135

Query: 231 RENIHEQKNMLRHINEL--YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           + N+  Q+++  +  E+  Y +     A  L      L  +     D   K   + K  +
Sbjct: 136 QRNMASQQSLTMNSKEIEVYRKEKTSLAEQLTLARELLSDHVELAEDRFGKAAGVGKMPK 195

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              I +P  G +++                +  V       IRA+V   + Q +K+G  A
Sbjct: 196 DGIIKAPTDGYVMWMNPELRLGVKLAKDAELFQVGKLNPMIIRAQVHEIEAQKLKEGEAA 255

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS-----DNNI 403
           TV    +  +  K + A + +I    +   + LQ   YY+V L I +            I
Sbjct: 256 TV---TFDSMPGKTYSATVSRIP--WAPIPSTLQQPSYYDVELTIPNPTLELKEGLKGQI 310

Query: 404 ELRN 407
            ++ 
Sbjct: 311 TIQP 314


>gi|291401345|ref|XP_002717248.1| PREDICTED: centromere protein E [Oryctolagus cuniculus]
          Length = 2697

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 6/214 (2%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           ++T E       +  K+  I+ L   I   K  L  +   Y    + F+  +   L+F  
Sbjct: 773 VITSEKDRLLSEVVDKESRIQGLLEEIGKTKDDLAAIQLNYKSTNQEFQDFKTLHLEFQQ 832

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           KY++   +  N  I+    SL  +  + R ++   + +L +K+  L    +  Q+ L  M
Sbjct: 833 KYNTVLEE--NERINQEMGSLSKEAQKFRLNLDTLKTELSHKTQELNQKTTEGQEKLKEM 890

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH---INELYDEANLEFANYL 259
           + L E+       L   ER       EL++ + E + + +    + +L +    E     
Sbjct: 891 EQLKEQLETRDLRLQTIEREKTLIAEELQQTLEEVRTLTQEKDDLRQLQESLQTERDQLK 950

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            +I   +  N  T     + L  L++ +E  TIL
Sbjct: 951 SDIQDTVNMNIDTQEQLRNALESLKQYQETITIL 984



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 73/197 (37%), Gaps = 3/197 (1%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +  ++  +K ++  +  E+  L     +     +  + ++EQ      K  +T      
Sbjct: 1346 SLTKERDDLKLIKEALQLERDQLKEDMRENLAKIQEIQGKQEQSFSMKEKDETTKIMSEM 1405

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              +   +++    L R   I + +L L  +       + S  K+   ++ L E       
Sbjct: 1406 EKLKEEFKAKDSALVR---IEMEKLKLSERLQESLDEVKSVAKERDDLERLQEALQSESK 1462

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             L +  + +    LE  E +   +  L+   E  D+  ++ +    EIS   ++ + T  
Sbjct: 1463 QLKEDIQEIIAKHLETEEELKVVRCCLKEQEETIDKLRVDLSAKETEISSMQKELEMTNV 1522

Query: 275  DEMSKLTILEKTREQKT 291
            +   K+  L +  EQ T
Sbjct: 1523 ELQKKIQELYEKPEQLT 1539


>gi|158286601|ref|XP_308829.4| AGAP006932-PA [Anopheles gambiae str. PEST]
 gi|157020546|gb|EAA04098.4| AGAP006932-PA [Anopheles gambiae str. PEST]
          Length = 1908

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 67/198 (33%), Gaps = 12/198 (6%)

Query: 98   LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K+      +     E++ LD  + +   L      +E   L       +   +  +  +
Sbjct: 841  EKQKECLEDKLSAIREQAILDKQSARTANLSLWKLEKELDALRGEKSILTRRIEQSDDRV 900

Query: 158  SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF----EKNAVSQ 213
            + V    +    +M+       + + +   LRA LS+ + +L   + L+    +     +
Sbjct: 901  TRVRHEKEELEFKMKQQQETIANRDKQIEDLRADLSALKDELRKERELWSSSEKDRLAEK 960

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             +L +           L E + E +   + +N+      +E   Y KE    L + Q   
Sbjct: 961  TELIE----CLARAQMLEEKLKESQQKQQQLNDRVKLLTVENGRYAKE----LREAQDEL 1012

Query: 274  ADEMSKLTILEKTREQKT 291
            AD       LE+     T
Sbjct: 1013 ADATEASESLEQRLAAVT 1030



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 71/186 (38%), Gaps = 11/186 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               +  K   I+ +R  +  E+S      +K + L   +E   ++  +   +      ++
Sbjct: 1072 RRRLSEKDHDIERVRQELQAERSGKTLSESKTNHLLAEYEELRKKFEELQRQMVEQQQEL 1131

Query: 153  FNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +  V   +++      ++     + E +  +L+   +    DL     L +++ 
Sbjct: 1132 IEKTSHLYEVQERIELLNHDAENLQKVVANYEQEHYILKEENARILTDLF----LAKEHI 1187

Query: 211  VSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              Q N++ +Q+ ++ + T EL       K +L+     Y E +++    L +  + ++  
Sbjct: 1188 TKQGNEMREQQNVIEQLTAELE----HVKRVLQEQKTFYTERDIKSEATLAQHKKLIDYL 1243

Query: 270  QRTFAD 275
            Q    +
Sbjct: 1244 QAKVEE 1249


>gi|332982076|ref|YP_004463517.1| RND family efflux transporter MFP subunit [Mahella australiensis
           50-1 BON]
 gi|332699754|gb|AEE96695.1| efflux transporter, RND family, MFP subunit [Mahella australiensis
           50-1 BON]
          Length = 612

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 43/77 (55%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           VS+ G++  + + V+IK+P SG I+   V +G  + +G  LL F+     + +D++   I
Sbjct: 278 VSAFGQLSAKSSPVQIKAPISGKIQTLYVSDGVIVSKGQKLLKFDTAILQNNLDVQNTKI 337

Query: 104 KNLRCHIDTEKSALDFL 120
           +  +  +  +K+ LD L
Sbjct: 338 EQAQLDLQNQKAQLDKL 354



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 91/283 (32%), Gaps = 20/283 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFS-GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           I +S++ +G +        I      G IKK   +    + +G  +   E+      I  
Sbjct: 56  ITVSINGTGTMEPAAQEDVI--IDGSGTIKKMYFKESDTVKKGDLMYEIENESLPLSIKQ 113

Query: 99  KKVSIKNLRCHI-DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            +++IK ++    D E      +    +         E + +       +          
Sbjct: 114 AELNIKQMQLSADDIEGQISKAIVTIPNAGLLDLNVSEGEQVSLNMPVATVQDISVLSLA 173

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
            SVY      +   +S+ +    +    +    ++   Q   ++       N+  Q  ++
Sbjct: 174 VSVYGQQAGSIKEGQSVTITVSGVSGSFNG--KVVQVTQSASSVQGGSGSGNSAPQIAVS 231

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            QER    +      +I +    +  I+     + L  +     + +    N   F    
Sbjct: 232 -QERDTTDTN-----DIEQPAQAMAVIDVTNRGSKLRISQTASAVIKTDTGNVSAFGQLS 285

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           +K + ++       I +PI+G I      S      + Q L+K
Sbjct: 286 AKSSPVQ-------IKAPISGKIQTLYV-SDGVIVSKGQKLLK 320



 Score = 37.3 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 47/391 (12%), Positives = 105/391 (26%), Gaps = 70/391 (17%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
              V  G Q+    P+ T +DI    L     VS+   +     E  ++    +      
Sbjct: 146 DLNVSEGEQVSLNMPVATVQDISVLSLA----VSVYGQQAGSIKEGQSVTITVSGVSGSF 201

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                +  Q    +     + +      +S    +         +  +  +D+ N+ S L
Sbjct: 202 NGKVVQVTQSASSVQGGSGSGNSAPQIAVSQERDTTDTNDIEQPAQAMAVIDVTNRGSKL 261

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R   ++     T   N+     +S             S ++++  I  +   L   + + 
Sbjct: 262 RISQTASAVIKTDTGNVSAFGQLS----------AKSSPVQIKAPISGKIQTLYVSDGVI 311

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMS-KLTILEKTREQKTILSPIAGTIVYNQSFS 307
                +   +   I ++    Q T  ++    L   +   ++  + +PI G I+      
Sbjct: 312 VSKGQKLLKFDTAILQNNLDVQNTKIEQAQLDLQNQKAQLDKLKVYAPIGGVIITQNVEE 371

Query: 308 SSNY--------------------------------------AQQSQPLMKIVPHSKLTY 329
             N                                          +  +  +        
Sbjct: 372 GDNVNDISQASSSSSNDQQSALSSNISSPLNSSSGSVSSTSKGNVAATIADV----GKFQ 427

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           +   V    I  +K G  A +      D     F   +      +  Q  +      Y+V
Sbjct: 428 VSIAVDELDINKIKVGQKAVITADALPDQ---SFVGEVI----DVEDQGTSQNGVTTYDV 480

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +    +       +++ G  A+V   A   
Sbjct: 481 TVAFDRVQ------DMKTGMTADVEIIAAQK 505


>gi|327356116|gb|EGE84973.1| cell polarity protein [Ajellomyces dermatitidis ATCC 18188]
          Length = 1495

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 72/205 (35%), Gaps = 5/205 (2%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             + ++      + L   +D E+   + L  K   L    E R  +L +   +     ++ 
Sbjct: 928  REAVNASSAKAELLERQLDEERDHREGLERKLLQLRAEHEERTTELENTTRRLRD--AEE 985

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                 +    S +           +R       +L    +++ ++ +     + + N  +
Sbjct: 986  LAETHAREAESHRAAFLAGLDRASSRDAESAAKALSEQRVAALKEQVDRANQMVKTNHQA 1045

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKN---MLRHINELYDEANLEFANYLKEISRDLEQN 269
             N+ +++ R   +    L +   +       LR   +   + N   +N  +E+   LE +
Sbjct: 1046 ANEASEKLRRAEERIAGLEQYQEQASREGLQLRRQLQAALKENQALSNENREVKSQLESH 1105

Query: 270  QRTFADEMSKLTILEKTREQKTILS 294
            QR  +    +   L++   ++ I +
Sbjct: 1106 QRDASALAIQHGALKELLVERGITA 1130



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 64/208 (30%), Gaps = 12/208 (5%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                    K   + L   +  EK A +     ++ + K     E Q  +   +   T   
Sbjct: 817  ALASQAEMKAKAEALMSELQEEKRARELAEELHEAMSKRLSEMESQTNNLELESLRTELH 876

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN------- 204
                             + ++   +++ +L  K   L   L +H  D+  ++        
Sbjct: 877  HLQSAFREEVALRSEAESALKLAQIDKNELTQKVENLNDRLENHGTDVGSLREAVNASSA 936

Query: 205  ---LFEKNAVSQNDLNQ-QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               L E+    + D  +  ER + +   E  E   E +N  R + +  + A         
Sbjct: 937  KAELLERQLDEERDHREGLERKLLQLRAEHEERTTELENTTRRLRDAEELAETHAREAES 996

Query: 261  EISRDLEQ-NQRTFADEMSKLTILEKTR 287
              +  L   ++ +  D  S    L + R
Sbjct: 997  HRAAFLAGLDRASSRDAESAAKALSEQR 1024



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 85/282 (30%), Gaps = 42/282 (14%)

Query: 59   IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
            I+    G +K+  VE G  I   +      D   +     +   ++ L   + +   A +
Sbjct: 1114 IQH---GALKELLVERG--ITADSRRSPLLDSPGSRFGTPEHNRLRELEQQLQSSIKAHE 1168

Query: 119  FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                 ++  E+  +    + L+ L   + +           + R               +
Sbjct: 1169 ETKISFESREQEADRAYNEKLEQLENDYQSAVHYVKGTEKMLKRMKDELAKYKTQNSKLQ 1228

Query: 179  LDLENKSSLLRALLSSHQKD-----------LTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             DLE       +  S   +              +M +L EK + S  DL  Q        
Sbjct: 1229 ADLETALQKASSRSSPSHEASAQWEAERSNMQHIMSDLQEKTSSSIADLKTQ-------L 1281

Query: 228  LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK-- 285
             +LRE++   +          +    E  N  ++   DLEQ +   A   S+    E+  
Sbjct: 1282 AKLREDLTAAQAERDQSQTEQENIKRELLNITEKSREDLEQLKNENALLESRALDAEQKV 1341

Query: 286  --------------TREQKTILSPIAG---TIVYNQSFSSSN 310
                           R+ + +LS   G   T+    S +   
Sbjct: 1342 TMLLDQVESSVTNYRRQSQQVLSHSNGLSRTVSNASSNTIGG 1383


>gi|325115434|emb|CBZ50989.1| conserved hypothetical protein [Neospora caninum Liverpool]
          Length = 2242

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 68/219 (31%), Gaps = 20/219 (9%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            +     I   K  +       D  +   +    +    E+A E R+ +L D   K  +  
Sbjct: 1423 LSARTAIASLKADLARTTEEKDALRKESEKKEEERVRKEQALEQRKRELEDAFEKERAAL 1482

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIY-------LNRLDLENKSSLLRALLSSHQKDLTMM 202
             +    G+ +     + +                 +  L   +  L A   +  + + + 
Sbjct: 1483 EERLRRGVEAERAKRRQETEGKAQEKREAHDDSAEKEKLRQHAQTLAAAYGALARKVELE 1542

Query: 203  KNLFEKNAVSQND--------LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            + L  +    + +        L QQE  + +   E  +   + + +  H  +  DE    
Sbjct: 1543 EALRGQAMKKKEEEMRNLLDHLKQQEARLRQREEENAQLHAQLQALRTHAQKSEDERQRN 1602

Query: 255  F-----ANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                  A   + + R L+   +    +  K+ +LE  + 
Sbjct: 1603 LDTPPQARETEALRRQLQDATQELTRQQQKIRLLEDQQR 1641



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 65/197 (32%), Gaps = 14/197 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            ++ +   L   +          +    + LR  ++ E++       + +   KA E RE 
Sbjct: 1457 RVRKEQALEQRKRELEDAFEKERAALEERLRRGVEAERAKR-----RQETEGKAQEKREA 1511

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                   +     ++       ++ R ++++             ++ K   +R LL   +
Sbjct: 1512 HDDSAEKEKLRQHAQTLAAAYGALARKVELEEALRGQA------MKKKEEEMRNLLDHLK 1565

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE--QKNMLRHINELYDEANLE 254
            +    ++   E+NA     L        KS  E + N+    Q      +     +A  E
Sbjct: 1566 QQEARLRQREEENAQLHAQLQALRTHAQKSEDERQRNLDTPPQARETEALRRQLQDATQE 1625

Query: 255  FANYLKEISRDLEQNQR 271
                 ++I   LE  QR
Sbjct: 1626 LTRQQQKIRL-LEDQQR 1641


>gi|315126421|ref|YP_004068424.1| membrane-fusion protein [Pseudoalteromonas sp. SM9913]
 gi|315014935|gb|ADT68273.1| membrane-fusion protein [Pseudoalteromonas sp. SM9913]
          Length = 334

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 61/194 (31%), Gaps = 14/194 (7%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPI-------EISVSSSGEILNEDNVVEIKSPF 63
           ++   SL ++ +L I+G  G   W  L P        +     +G I   +  +  K P 
Sbjct: 4   KSTFKSLSKLAVLVIVGGAGWYAWQTLQPTSFADQLPDSVAYGNGRIEATEYDIATKLP- 62

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V+ G  +  G  L   +  +    +   +  +      +  E         +
Sbjct: 63  -GRLVDVMVQEGDMVKAGQTLAVIDTDDLNAQLREAEAGL-----RVANESRKYALAIVE 116

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               E  F   E +    L +      +V +   ++   +          +  +  ++E 
Sbjct: 117 QHKSELNFAQTELRRSAKLLEKGHISKEVVDQQRTTSAIAQAALTAANVKVVQSDAEIEA 176

Query: 184 KSSLLRALLSSHQK 197
             + +  L S+   
Sbjct: 177 AQARIERLQSNIAD 190



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 89/294 (30%), Gaps = 39/294 (13%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +      R   ++   G        +       +   L+     +R    +R        
Sbjct: 57  IATKLPGRLVDVMVQEGDMVKAGQTLAVIDTDDLNAQLREAEAGLRVANESRKYALAIVE 116

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             ++ L+  Q +L     L EK  +S+ ++  Q+R                     ++  
Sbjct: 117 QHKSELNFAQTELRRSAKLLEKGHISK-EVVDQQRTTSAIAQ--------AALTAANVKV 167

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
           +  +A +E A                     +++  L+      T+ +PI G I+Y +  
Sbjct: 168 VQSDAEIEAAQ--------------------ARIERLQSNIADSTLTAPINGRILY-RLA 206

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      ++ ++  +   Y+   +   Q   V  G  A +     A+       A 
Sbjct: 207 EPGEVLGSGGKVLSLLDLTD-VYMSIYLPTAQASKVTIGSQARIVIDAVAEYT---LPAK 262

Query: 367 IEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           +  +         S +  N + +  + V +K+      D+  +++ G P     
Sbjct: 263 VTFVSAQAQFTPKSVETRNERDKLMFRVKVKLDSQLLKDHIKQVKTGVPGLAYV 316


>gi|299531583|ref|ZP_07044988.1| HlyD family secretion protein [Comamonas testosteroni S44]
 gi|298720299|gb|EFI61251.1| HlyD family secretion protein [Comamonas testosteroni S44]
          Length = 441

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 64/196 (32%), Gaps = 10/196 (5%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
               + + E +      ++   +   +  L      Y ++  + A         L     
Sbjct: 225 PNQMVRKGESLFGLDEAQISSRLEVARQALLTAEAEYRQS-AQLALGDARSKAQLAALVG 283

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS-SSNYAQQSQPLMKIVPHSKLTYI 330
              ++ +++  L   R++  +L+P  G ++++          Q  + +M+I   S    I
Sbjct: 284 RIGEKRAEVQYLSDQRDRSRVLAPEDGMVLFDSPTEWLGKPVQTGERVMRIA-RSDEVEI 342

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A V       +     ATV+      +       +  K+  +    +        Y V 
Sbjct: 343 EAWVPIGD--AIPLAQGATVKL----YLAANPMAGLEGKLRYMAYDANARPDGSYAYRVR 396

Query: 391 LKITDLAFSDNNIELR 406
             ++ LA  +  I L+
Sbjct: 397 ASMS-LAKEEARIGLK 411



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 55/140 (39%), Gaps = 6/140 (4%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           N  +  ++ T   + G+  L      +P+ +SV + GE++    V  +++P  G+I +  
Sbjct: 168 NAKSWWQKKTTWILGGLFVLGA----VPVHMSVLAPGELVAAQPV-VLRAPLDGVIDQIH 222

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+    + +G  L   ++ + +  +++ + ++         + + L   + +      A 
Sbjct: 223 VQPNQMVRKGESLFGLDEAQISSRLEVARQALLTAEAEY-RQSAQLALGDARSKAQLAAL 281

Query: 132 ESREEQLLDFLGKYHSTCSK 151
             R  +    +        +
Sbjct: 282 VGRIGEKRAEVQYLSDQRDR 301


>gi|226192916|ref|ZP_03788528.1| putative multidrug resistance protein [Burkholderia pseudomallei
           Pakistan 9]
 gi|225935006|gb|EEH30981.1| putative multidrug resistance protein [Burkholderia pseudomallei
           Pakistan 9]
          Length = 395

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/198 (10%), Positives = 66/198 (33%), Gaps = 4/198 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  + ++ ++ ++G   W          +       + N + I    SG +
Sbjct: 49  ERKRPGKKPLVVLAIIVVLLLVGAFVW-WFATRNQVSTDDAY--TDGNAITIAPKVSGYV 105

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               +++   + +G  LL  +  +    +D  +  +   +  +D  +  LD  + ++   
Sbjct: 106 VALAIDDNVYVHRGDLLLVIDQRDYQAQVDAARAQLGLAQAQLDAAQVQLDIAHVQFPAQ 165

Query: 128 -EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             +A    E     F     +   +      ++  +++ +   +  +   N      ++ 
Sbjct: 166 YRQAQAQIEAAQASFRQALAAYERQHAVDARATSQQAIDVADAQRLTADANVATTRAQAR 225

Query: 187 LLRALLSSHQKDLTMMKN 204
               +    ++  T ++ 
Sbjct: 226 TASLVPQQIRQAQTAVEQ 243


>gi|153007686|ref|YP_001368901.1| RND family efflux transporter MFP subunit [Ochrobactrum anthropi
           ATCC 49188]
 gi|151559574|gb|ABS13072.1| efflux transporter, RND family, MFP subunit [Ochrobactrum anthropi
           ATCC 49188]
          Length = 375

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 55/194 (28%), Gaps = 27/194 (13%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLE-----------QNQRTFADEMSKLT 281
           +I E       I     E  L+ A   ++    L            + +   A+    L 
Sbjct: 104 SIAELDAETEKIAVAKAETALKDAQTTRQRIAKLRATNTATEVQVVETELAVANAQLALQ 163

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
             +    ++T+ +PI+G +         NY      + +I        I   V  +    
Sbjct: 164 DAQLALSRRTVRAPISGIVGILPVN-VGNYITAQTSIGRI-DDRSKVLIDIWVPERFAPQ 221

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           +K G   T     +           I  +D ++ +    L       V  ++      + 
Sbjct: 222 IKVGQPLTAESTAFPGETY---SGEINAVDNMLDEASRTLH------VRAEVP-----NT 267

Query: 402 NIELRNGFPAEVLF 415
              LR G    V  
Sbjct: 268 QDRLRAGMSFSVTV 281



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 41/131 (31%), Gaps = 2/131 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFE-DIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           I    SG + K  V+ G  + +G  +   + + E   +   +              K   
Sbjct: 80  ITPYSSGYMTKLYVKAGDSVKEGDSIAELDAETEKIAVAKAETALKDAQTTRQRIAKLRA 139

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                +  V+E        QL        +   +     IS +   L + +    +   +
Sbjct: 140 TNTATEVQVVETELAVANAQLA-LQDAQLALSRRTVRAPISGIVGILPVNVGNYITAQTS 198

Query: 178 RLDLENKSSLL 188
              ++++S +L
Sbjct: 199 IGRIDDRSKVL 209


>gi|126321216|ref|XP_001376791.1| PREDICTED: similar to sodium channel associated protein 2
           [Monodelphis domestica]
          Length = 895

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 83/235 (35%), Gaps = 14/235 (5%)

Query: 66  IIKKFQVENG------SQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHI-DTEKSA 116
           I     V++G          +   L     ++ E++ LI    + +K  +  I +  KS 
Sbjct: 514 ITSAILVKDGFENIAAELAKKKHALARALQKESESSTLIQDLTLMVKEQKAKIAEVSKSK 573

Query: 117 LDF---LNNKYDVLEKAFESREEQ--LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           L+    L N+   LE   E  +++   ++ L +  S  +       S +      +    
Sbjct: 574 LETTSNLKNRICTLETMIEEDKQKSVQIELLKQEKSQLTSQLTAQESIIDGLRAERKIWG 633

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           + +    + L      L A +     +   ++ L E+ + S     +      ++  +L+
Sbjct: 634 QELAQQGVSLAQDRGKLEAKIEVLTTENESLRKLSERGSDSLKIKVKIIEDQTETIRKLK 693

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           E++ E+   +R + E   E        L E +  LE+          +   L++ 
Sbjct: 694 ESLQERDEHIRKLREEITEMQKNTQEQLDEKAVQLEELMEKLEQYSERKEDLKQQ 748



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 62/182 (34%), Gaps = 3/182 (1%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           T + +D K V ++ L   ++      + L  +    E   E   +       K+      
Sbjct: 717 TQEQLDEKAVQLEELMEKLEQYSERKEDLKQQLKEKEAELEEIGKAYSAINKKWQDKGEL 776

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +    I       K +    + I      L+N+ + +  L S        ++++   +  
Sbjct: 777 LSGLEIQVKQMKEKFETKEKKLIEERDKSLQNQKATMERLRSMDDSFRKQLESVVAAH-- 834

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            Q +L Q      K      E + + ++ +R + +  ++        +K ++  L   Q+
Sbjct: 835 -QAELLQLANEKQKQIDAADEKVSQVEDEMRQLLQETEQNKKSMELKIKRLTYALRDIQQ 893

Query: 272 TF 273
            F
Sbjct: 894 EF 895


>gi|89900726|ref|YP_523197.1| secretion protein HlyD [Rhodoferax ferrireducens T118]
 gi|89345463|gb|ABD69666.1| Secretion protein HlyD [Rhodoferax ferrireducens T118]
          Length = 395

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 63/190 (33%), Gaps = 26/190 (13%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            R+   +  R+ ++  +    +       A L   Q +L   + L ++  VS N      
Sbjct: 95  ERTRAEQSARIGAMQASVARAQANVGRAGAALDQAQAELKRSEALAQQGFVSPNQ----- 149

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                         +E   +   + E   E+             +LEQ++     + S++
Sbjct: 150 --------------NETGRLAVRLREKELESA---RQEEAAARHELEQSRVALR-QFSQI 191

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
           T   + R    + +P++G ++  Q  S         P+M++        +   +  +   
Sbjct: 192 TPGGRQRAY-DVKAPVSGKVLKVQQQSEG-IVMAGTPIMELG-DPTQLEVVVDILTEDAA 248

Query: 341 HVKKGYTATV 350
            +K G    +
Sbjct: 249 QIKPGTAVQL 258



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 13/171 (7%), Positives = 48/171 (28%), Gaps = 18/171 (10%)

Query: 38  LPIEISVSSSGEILNE---------DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF- 87
             +EI+  + G               +   + +P +G + +  ++ G  +++  P+ TF 
Sbjct: 27  AEVEIAAVTQGRFERSVQEDGKTRLRDRYVVSAPLAGRVARILLKQGDTVMRDAPVATFW 86

Query: 88  --------EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
                   E         +  +     R   +  ++       + ++      +++  + 
Sbjct: 87  PVAPALLDERTRAEQSARIGAMQASVARAQANVGRAGAALDQAQAELKRSEALAQQGFVS 146

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               +      ++    + S  +        +    +        +   R 
Sbjct: 147 PNQNETGRLAVRLREKELESARQEEAAARHELEQSRVALRQFSQITPGGRQ 197


>gi|28571853|ref|NP_651216.2| CG6129 [Drosophila melanogaster]
 gi|28381445|gb|AAF56238.3| CG6129 [Drosophila melanogaster]
          Length = 2048

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 73/206 (35%), Gaps = 2/206 (0%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +       +  K  SI+ +   ++ +  AL  L ++   L+   +  +E+L         
Sbjct: 1631 DLTRLQMALQEKDCSIRQMAERLENQNRALTQLEDRCTALKSTVDQLKERLQKSAVSETQ 1690

Query: 148  TCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               ++      +S      +    +++ +  +    EN+  +L   L S Q +L  ++  
Sbjct: 1691 LRGEIKTLQKELSEQGHCSQANEDKLKLVQKSLQTAENEKRILTERLDSAQTNLNELRRS 1750

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +        L +Q   +      L   +   K       +          N  +E+SR 
Sbjct: 1751 QQAQLDGNQRLQEQVTDLEVQRSALESQLRIAKWNQESGGDKDLTNGNGGGNGEEELSRQ 1810

Query: 266  LEQNQRTFADEMSKLTILEKTREQKT 291
            L+ +QR  ++  SKL  L+   +Q  
Sbjct: 1811 LKSSQREKSELRSKLQTLQDKVKQLE 1836



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 70/206 (33%), Gaps = 7/206 (3%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            +   +          ++   + L      E      + N     E+A +   E++L    
Sbjct: 928  VARLQKELEQCQRKAQETKTQLLNAARAAESDFNQKIANLQACAEEAAKRHGEEILQLRN 987

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK--SSLLRALLSSHQKDLTM 201
                   +      ++    ++    R+ ++  +   L  +   +L+RA     Q  L  
Sbjct: 988  ALEKRMQQALQALQTAKDDEIEKLQERLATLQAHLESLVQQHEEALIRAESEKQQALLIA 1047

Query: 202  MKN---LFEK-NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
             ++   + E+  AVS++   +QE  + +S  E      +Q+  +  + +   +   +   
Sbjct: 1048 HRDKQAVAERLEAVSRDLKTEQE-SLDRSRREANARDEKQRAAIAQLKDEMVQMRTKEEE 1106

Query: 258  YLKEISRDLEQNQRTFADEMSKLTIL 283
            +  ++   + + +   +    +   L
Sbjct: 1107 HKIKLEECIRKQELQLSSLREERESL 1132



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 71/208 (34%), Gaps = 8/208 (3%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L+  E  +   L+   +   + +   ++     L       D   +   +R+E+    + 
Sbjct: 1033 LIRAESEKQQALLIAHRDK-QAVAERLEAVSRDLKTEQESLDRSRREANARDEKQRAAIA 1091

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +      ++     +            +R   L    L  +   L  +    + ++ + +
Sbjct: 1092 QLKDEMVQM----RTKEEEHKIKLEECIRKQELQLSSLREERESLCRVSEELKMEIRLKE 1147

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLK 260
            +  E       D  ++ +        LR+ + + +  L   N   D+   +N E  +++K
Sbjct: 1148 DRMESTNNELQDALRKSKEGEGFIDSLRKELTDCRRQLADSNIERDKYSGSNKELRDHVK 1207

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTRE 288
             +     +  R   + + K++ LE T+ 
Sbjct: 1208 RVESAKREQARAIEEALQKISNLEDTKN 1235



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 74/213 (34%), Gaps = 13/213 (6%)

Query: 85  LTFEDIETTDLIDLKKVSIKNL-RCHIDTEKSALDF--------LNNKYDVLEKAFESRE 135
           L  + ++  + I   K  +  L +  ++ E   L          L  +  + + A  +R+
Sbjct: 749 LRIQSVDQCNEIGELKKELAILDKARLELETDNLSAGEKLKCLQLEKEKILQDLACVTRD 808

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
              +           +  N  +    + L+        +  N  ++       + ++  H
Sbjct: 809 RGDIHNQLTAMCRKKEALNEELMRTRQRLEQTTETNSRLNRNLEEMVKDVEEKQVVIDLH 868

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           +KD   +  L    A  +++    E +++ +   L      +  + R + E         
Sbjct: 869 EKDTHRLNELL---AALRSEKESLESVLFDTNTSLEATEERRSQLERDLQEALVR-EESL 924

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            N++  + ++LEQ QR   +  ++L    +  E
Sbjct: 925 KNHVARLQKELEQCQRKAQETKTQLLNAARAAE 957


>gi|74180977|dbj|BAE27768.1| unnamed protein product [Mus musculus]
          Length = 2031

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 68/209 (32%), Gaps = 5/209 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +D   +   +      K     + + ++ +  L  +    E+A    +++  +   + 
Sbjct: 1724 ELDDTRASR--EEILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEI 1781

Query: 146  HSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             ++  K  +       +   +      +     N   + ++       +     DL + +
Sbjct: 1782 ANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLER 1841

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEI 262
            +  +KN  ++  L +Q + +     E+   +  + K  +  +     +   +  N  KE 
Sbjct: 1842 SHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAALEAKIAQLEEQLDNETKER 1901

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +Q +RT       L  +E  R    
Sbjct: 1902 QAASKQVRRTEKKLKDVLLQVEDERRNAE 1930



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 68/199 (34%), Gaps = 5/199 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ ++  ++  N K    +K  E R  +    L +     SK
Sbjct: 1029 ARQKLQLEKVTTEAKLKKLEEDQIIMEDQNCKLAKEKKLLEDRVAEFTTNLME-EEEKSK 1087

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +     +     R+R     R +LE     L    +     +     L  + A 
Sbjct: 1088 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIA---ELQAQIAE 1144

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +  L ++E  +  +   + E   ++   L+ I EL  +   E    L+       + ++
Sbjct: 1145 LKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELETQI-SELQEDLESERASRNKAEK 1203

Query: 272  TFADEMSKLTILEKTREQK 290
               D   +L  L+   E  
Sbjct: 1204 QKRDLGEELEALKTELEDT 1222



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 72/225 (32%), Gaps = 37/225 (16%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
               + LR  +  +K  L+ + +  +   +  E R + L     K      ++        
Sbjct: 968  AEAEELRARLTAKKQELEEICHDLEARVEEEEERCQYLQAEKKKMQQNIQELEEQLEEEE 1027

Query: 161  YRSLKMKLT----------------------------------RMRSIYLNRLDLENKSS 186
                K++L                                   R+     N ++ E KS 
Sbjct: 1028 SARQKLQLEKVTTEAKLKKLEEDQIIMEDQNCKLAKEKKLLEDRVAEFTTNLMEEEEKSK 1087

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L  L + H+  +T ++    +    + +L +  R +   + +L + I E +  +  +  
Sbjct: 1088 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKM 1147

Query: 247  LYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTRE 288
               +   E    L  +  +  Q     +   +  ++++ L++  E
Sbjct: 1148 QLAKKEEELQAALARVEEEAAQKNMALKKIRELETQISELQEDLE 1192



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 80/237 (33%), Gaps = 16/237 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             +     +   L+        +L D +K     +      E   L  L    D   K  E
Sbjct: 1647 RDEQSEEKKKQLVRQVREMEAELEDERKQRSMAMAARKKLEMD-LKDLEAHIDTANKNRE 1705

Query: 133  SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               +QL     +      ++ +       +    K    +++S+    + L+ + +    
Sbjct: 1706 EAIKQLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMIQLQEELAAAER 1765

Query: 191  LLSSHQKDLTMMKNLFE----KNAVSQNDLNQQERIVYKSTLELRENIH-------EQKN 239
                 Q++   + +       K A++  +  + E  + +   EL E            K 
Sbjct: 1766 AKRQAQQERDELADEIANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKK 1825

Query: 240  MLRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                I+++  + NLE ++  K     + LE+  +    ++ ++    K++ + +I +
Sbjct: 1826 ANLQIDQINTDLNLERSHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAA 1882



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 72/190 (37%), Gaps = 8/190 (4%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            S+  L       +  ++ +  + + LE   ++ E+  L       +  ++          
Sbjct: 1590 SVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDE 1649

Query: 162  RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +S + K   +R +     +LE++       +++ +K    +K+L       +  ++   +
Sbjct: 1650 QSEEKKKQLVRQVREMEAELEDERKQRSMAMAARKKLEMDLKDL-------EAHIDTANK 1702

Query: 222  IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               ++  +LR+   + K+ +R +++    +  E     KE  + L+  +        +L 
Sbjct: 1703 NREEAIKQLRKLQAQMKDCMRELDDTRA-SREEILAQAKENEKKLKSMEAEMIQLQEELA 1761

Query: 282  ILEKTREQKT 291
              E+ + Q  
Sbjct: 1762 AAERAKRQAQ 1771



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 17/218 (7%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             D+E     + ++            +         + +   +     E+   +   K   
Sbjct: 989  HDLEARVEEEEERCQYLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLE 1048

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                +       + +  K+   R+     N ++ E KS  L  L + H+  +T ++    
Sbjct: 1049 EDQIIMEDQNCKLAKEKKLLEDRVAEFTTNLMEEEEKSKSLAKLKNKHEAMITDLEERLR 1108

Query: 208  KNAVSQNDLNQQER-------IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY-- 258
            +    + +L +  R        +     EL+  I E K  L    E    A         
Sbjct: 1109 REEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAA 1168

Query: 259  --------LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                    ++E+   + + Q     E +     EK + 
Sbjct: 1169 QKNMALKKIRELETQISELQEDLESERASRNKAEKQKR 1206



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 75/210 (35%), Gaps = 12/210 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +  D  +   +       +   AL+    +   LE+  +    ++ D +         V
Sbjct: 1532 AEERDRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSV 1591

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                    ++ + ++   T++  +       E+    L   L + +      ++L  ++ 
Sbjct: 1592 HELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFE--RDLQGRDE 1649

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY-----DEANLEFANY-LKEISR 264
             S+    Q  R V +   EL +   ++   +    +L       EA+++ AN   +E  +
Sbjct: 1650 QSEEKKKQLVRQVREMEAELEDERKQRSMAMAARKKLEMDLKDLEAHIDTANKNREEAIK 1709

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILS 294
             L + Q    D M +L   +    ++ IL+
Sbjct: 1710 QLRKLQAQMKDCMRELD--DTRASREEILA 1737



 Score = 36.9 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 70/216 (32%), Gaps = 17/216 (7%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKY--------DVLEKAFESREEQLLDF-LGK 144
                 K       +  ++   + L+    +         D L+KA    ++   D  L +
Sbjct: 1782 ANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLER 1841

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSI-----YLNRLDLENKSSLLRALLSSHQKDL 199
             H+  ++     +    + LK KL  M S        +   LE K + L   L +  K+ 
Sbjct: 1842 SHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAALEAKIAQLEEQLDNETKER 1901

Query: 200  TMMKNLFEKNAVSQNDLN---QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                    +      D+    + ER   +   +  +    +   L+   E  +E      
Sbjct: 1902 QAASKQVRRTEKKLKDVLLQVEDERRNAEQFKDQADKASTRLKQLKRQLEEAEEEAQRAN 1961

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +++ R+LE    T      +++ L+    +  +
Sbjct: 1962 ASRRKLQRELEDATETADAMNREVSSLKNKLRRGDL 1997


>gi|254559860|ref|YP_003066955.1| secretion protein, RND family efflux protein [Methylobacterium
           extorquens DM4]
 gi|254267138|emb|CAX22960.1| putative secretion protein, putative RND family efflux protein
           [Methylobacterium extorquens DM4]
          Length = 508

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 57/175 (32%), Gaps = 16/175 (9%)

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E+   A    AN   + +R   QN     + ++++  + K     T  SP  G ++   +
Sbjct: 255 EINAAAAQLIANPGFDGARRRLQNLNVSEEVINEMERIRKVPMAITWTSPRDGLVLQRTA 314

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A     L +I       ++ A V    +  VK G   +VR           F  
Sbjct: 315 V-EGMKAAAGDTLFRIG-DISTLWVLADVPEYDLGSVKVGQPVSVRVRSLPGR---SFTG 369

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +  I P ++ Q           V +++      + +  L     A+V      T
Sbjct: 370 KVGLIYPQVNTQTRTT------RVRIELP-----NPDGVLLPDMYADVEIGTGAT 413


>gi|294942204|ref|XP_002783428.1| hypothetical protein Pmar_PMAR006956 [Perkinsus marinus ATCC 50983]
 gi|239895883|gb|EER15224.1| hypothetical protein Pmar_PMAR006956 [Perkinsus marinus ATCC 50983]
          Length = 2137

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 67/229 (29%), Gaps = 13/229 (5%)

Query: 93   TDLIDLKKVSIKNLRC----HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
               +D+  V+I  +       +   + +  F     +V+      R+  + D        
Sbjct: 1038 ESSVDVSSVNIDAVLASSNQAVIAARPSSTFRGYSEEVVRAELSLRDAAIQDLQRGLALK 1097

Query: 149  CSKVFNYGISSVY---RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             ++V       V    R ++    ++      RL    ++  L A     +         
Sbjct: 1098 ATEVLAVKQRLVELHSREIEGLRAQLDMAESARLQASRRAEELEATCDELKVAHARSTAA 1157

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH----INELYDEANLEFANYLKE 261
             ++  V    + Q +R   +    L E+       ++     +    +    E       
Sbjct: 1158 LQRELVEAQGMLQLQRFETERATNLAEDRAAVVEEMQQECKVLRSKVELLRTELDEERAS 1217

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
              R+L   +   A    +L+  EK  E  T+   +   I    + +   
Sbjct: 1218 KVRELSSVRGEIAVLRERLSSYEKMEEDMTM--AVQAAISLESTCTPGG 1264


>gi|284005703|ref|YP_003391523.1| efflux transporter, RND family, MFP subunit [Spirosoma linguale DSM
           74]
 gi|283820887|gb|ADB42724.1| efflux transporter, RND family, MFP subunit [Spirosoma linguale DSM
           74]
          Length = 424

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 90/291 (30%), Gaps = 27/291 (9%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           + A      +             ++ N  +      +     R   + L         + 
Sbjct: 24  QTATSPETGEAAKTPPTAAPDVVELTNDQLRIGAIEMGQVSYRNLGLLLQVNGRLAVPAQ 83

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI--- 244
            +  +++ Q        L     V +  L    RI     ++L+++  E ++ L ++   
Sbjct: 84  SQVAITAIQGGFVRNLPLLPGQPVRKGQLLA--RIENPDLVQLQQDYAENQSRLTYLDAE 141

Query: 245 ---NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK---------TI 292
               +   E N+      ++ S +  Q +        +L ++  + +           ++
Sbjct: 142 FARQKELSEQNVGALKVFQQTSAERNQVRARLGGMAQRLRLVGLSPQAALDGKFNSYYSV 201

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +P+ G +          + Q +  + ++   S+  Y    V  K++  +++G   ++R 
Sbjct: 202 TAPVNGVVTNVSVN-VGQFVQPADVIAQLT-SSQGLYAELTVFEKELPQLREGQRVSLRL 259

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
               +   K+    I  I+  I    +           L   D   + N  
Sbjct: 260 ---NNEGGKERSGRITYINRTIDADRSVRV-----VARLDQPDAHLAPNTF 302



 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 67/208 (32%), Gaps = 6/208 (2%)

Query: 46  SSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            +G +         I +   G ++   +  G  + +G  L   E+ +    +       +
Sbjct: 74  VNGRLAVPAQSQVAITAIQGGFVRNLPLLPGQPVRKGQLLARIENPDLV-QLQQDYAENQ 132

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           +   ++D E +    L+ +     K F+    +      +      ++   G+ S   +L
Sbjct: 133 SRLTYLDAEFARQKELSEQNVGALKVFQQTSAERNQVRARLGGMAQRLRLVGL-SPQAAL 191

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALL---SSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             K     S+      +    S+        +     LT  + L+ +  V + +L Q   
Sbjct: 192 DGKFNSYYSVTAPVNGVVTNVSVNVGQFVQPADVIAQLTSSQGLYAELTVFEKELPQLRE 251

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYD 249
               S     E   E+   + +IN   D
Sbjct: 252 GQRVSLRLNNEGGKERSGRITYINRTID 279


>gi|226952016|ref|ZP_03822480.1| secretion protein [Acinetobacter sp. ATCC 27244]
 gi|226837222|gb|EEH69605.1| secretion protein [Acinetobacter sp. ATCC 27244]
          Length = 336

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 94/301 (31%), Gaps = 36/301 (11%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I+   V+ G ++ QG  L T                 K     I  +++       K 
Sbjct: 53  GRIQTLSVQEGDKVKQGQVLATL----------------KTEALKIQQQQAEAQLNIQKQ 96

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL-EN 183
            ++E+   +R EQ+     +  S  +++           +    T  ++I    LD  ++
Sbjct: 97  TLIEQEAGNRPEQIAQAKAQLASAQAQLEKANKDYQRLQVLSNTTSGQAISKQELDYAQS 156

Query: 184 KSSLLRALLSSHQKDLTMMKNLF--EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
             +   A +   + +L +++     E+ A ++      +  +     ++ ++        
Sbjct: 157 NQATAAATVKEREANLQLLQKGARTEERAAAKAQYQATQANLNLIQYQISQSELRSPVNA 216

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL-----SPI 296
                L +  ++  A          +            L++L+     + I       PI
Sbjct: 217 VVRARLQEVGDMTTAQKAVYTLALTDPKWVRVYANEKDLSLLKMGATAQVIRDAQPDQPI 276

Query: 297 AGTIVYNQS---FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ-IQHVKKGYTATVRF 352
            G I Y  S   F+      Q++ +              +V        +K G   TV+ 
Sbjct: 277 TGKIGYISSVAEFTPKTV--QTEDI------RTTLVYEVRVYVDDPQDQLKMGQPVTVKI 328

Query: 353 P 353
            
Sbjct: 329 T 329



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 89/292 (30%), Gaps = 15/292 (5%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           AFE         + +            + +    ++ +    +     +  +E ++    
Sbjct: 48  AFEQAGRIQTLSVQEGDKVKQGQVLATLKTEALKIQQQQAEAQLNIQKQTLIEQEAGNRP 107

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
             ++  +  L   +   EK       L           +  +E  + Q N       + +
Sbjct: 108 EQIAQAKAQLASAQAQLEKANKDYQRLQVLSNTTSGQAISKQELDYAQSNQATAAATVKE 167

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                        + +    +  +    + L +++    Q  + SP+   +V  +     
Sbjct: 168 REANLQLLQKGARTEERAAAKAQYQATQANLNLIQYQISQSELRSPVNA-VVRARLQEVG 226

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
           +    +Q  +  +  +   ++R     K +  +K G TA V      D         I  
Sbjct: 227 D-MTTAQKAVYTLALTDPKWVRVYANEKDLSLLKMGATAQVIRDAQPDQ---PITGKIGY 282

Query: 370 IDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           I  +      + Q  +++T   YEV + + D        +L+ G P  V  T
Sbjct: 283 ISSVAEFTPKTVQTEDIRTTLVYEVRVYVDDP-----QDQLKMGQPVTVKIT 329


>gi|225350600|gb|ACN88162.1| SilD [Streptococcus pyogenes]
          Length = 319

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 82/245 (33%), Gaps = 14/245 (5%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL------RALLSSHQKDLT 200
           +  + + N+ IS +   L     ++      +  + N+   L      +  L  +Q    
Sbjct: 29  NNQASLANHAISVITSQLDELHQKITDYEELKQAINNQEYKLSPENPHQTALKKYQTQFQ 88

Query: 201 MMK--NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
             +  +  ++  +SQ   N  E     + L ++       N          + ++    +
Sbjct: 89  AQEDNSALKEEYLSQIPQNISELESSMANLSIQRT--STGNFSLPDTSHRIKIDILKTQF 146

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
           L+  S+ L   +    +  +++       +   I++P  GTI  N  F   +       +
Sbjct: 147 LQNASQQLTTVENQITELKNQIEQANIQLKNNIIIAPETGTIHLNSEFEGKSLIPNGSEV 206

Query: 319 MKIVPHSK---LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            +I P  +     +I   VT + +  +K+     +      +         I+ ID   +
Sbjct: 207 AQIYPDIQKIKEVFITYYVTSEHVSLLKEKQGVRLSLEKVGNQ-TLTINGTIQTIDKSAT 265

Query: 376 QQDNN 380
           + +  
Sbjct: 266 KTNQG 270


>gi|259155254|ref|NP_001158868.1| Inner centromere protein B [Salmo salar]
 gi|223647776|gb|ACN10646.1| Inner centromere protein B [Salmo salar]
          Length = 885

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 72/250 (28%), Gaps = 20/250 (8%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           LR     E+ A   +  K    E+    R+ +      K   +  +          R  +
Sbjct: 552 LRVERVAEEKAKKKMATKRQ--EELELRRKMEEDARRRKIQQSEEEEKRQQELQAKRRAE 609

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
            +  R R +   R  LE K  L R L    Q      +   EK    Q ++ +  R   +
Sbjct: 610 EEQERARKMTEARRALELKKELERELERDRQASAERERVEREKAIALQREVERAAREKER 669

Query: 226 STLELRENIHEQKNMLRHINE-----LYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             LE R+   +Q+                +   E     +  +  L + QR       + 
Sbjct: 670 RELEKRKKEEQQRQAEEERQREAERLAERQREAERLAERQREAERLAERQREAERLAERQ 729

Query: 281 TILEKTREQK------TILSPIAGTIVYNQSFSSSNYAQQSQPL------MKIVPHSKLT 328
              E+  E++       + + +   ++             +  +       +I P     
Sbjct: 730 REAERLAERQREAAKSHLTAEVQPVVLKTPV-GKGGVLNVTVDIEQSPQSYEITPKGGNK 788

Query: 329 YIRAKVTPKQ 338
            +     P+ 
Sbjct: 789 PVVLNTNPED 798


>gi|217979460|ref|YP_002363607.1| efflux transporter, RND family, MFP subunit [Methylocella
           silvestris BL2]
 gi|217504836|gb|ACK52245.1| efflux transporter, RND family, MFP subunit [Methylocella
           silvestris BL2]
          Length = 314

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/214 (10%), Positives = 64/214 (29%), Gaps = 27/214 (12%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              ++    +   L   + E  + L    +L D+   +        ++ L      + + 
Sbjct: 85  LALQQAQAVAEGRLAA-LTEANSDLARYKQLSDKVVSQQKFEQVLATQQLADA--AYKEA 141

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
           +++  + +   ++  + + + G +          Y    + +  +V  S   +I      
Sbjct: 142 VAQRDVAKLNLDRSDVRASVNGAVTNFDLR-PGAYVSAGKGVFALV-DSDSLHIEGYFEE 199

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT------------- 383
            ++  +  G   +VR         +     +E I   I  ++ +                
Sbjct: 200 TKLPRIHAGDRVSVRL----MGESRMLTGRVESIAGAIEDRERSAGASLVANVNPTFSWV 255

Query: 384 --QEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              +   V + + +   +   + L  G  A V  
Sbjct: 256 RLAQRVPVRIALDE---TPQEVRLLPGRTATVSV 286



 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 73/233 (31%), Gaps = 13/233 (5%)

Query: 16  SLKRMTLLSIIG-IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
                 L+  +G + G   W+    ++   +  G +  +  +V +    SG++    V++
Sbjct: 10  RFAITALMVAVGALFGSELWAYY--VDAPWTRDGRVRAD--IVAVAPDVSGLVTDVLVQD 65

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD--VLEKAFE 132
              + +G  L   +       +   +   +     +    S L       D  V ++ FE
Sbjct: 66  NEIVRRGDLLFRIDRERFALALQQAQAVAEGRLAALTEANSDLARYKQLSDKVVSQQKFE 125

Query: 133 S--REEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                +QL D   K       V   N   S V  S+   +T         +        L
Sbjct: 126 QVLATQQLADAAYKEAVAQRDVAKLNLDRSDVRASVNGAVTNFDLRPGAYVSAGKGVFAL 185

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQ--NDLNQQERIVYKSTLELRENIHEQKN 239
               S H +       L   +A  +    L  + R++      +   I +++ 
Sbjct: 186 VDSDSLHIEGYFEETKLPRIHAGDRVSVRLMGESRMLTGRVESIAGAIEDRER 238


>gi|168001236|ref|XP_001753321.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695607|gb|EDQ81950.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 504

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 76/211 (36%), Gaps = 14/211 (6%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E T+     +  +  L   +   +++L  ++   +++E+      ++L   +       
Sbjct: 152 VELTNDRSSLEGKLHELEAEVIRSRASLTRISQDKELVEQHNAWLNDELTAKVSALLEER 211

Query: 150 SKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +           +S   RS+K     ++      L+LE+K S +R  L   ++D  + +
Sbjct: 212 HESAETEAGLKFKLSEAERSVKDTTQTLQRTKEYNLELESKLSQVREELKFLKEDSAVKE 271

Query: 204 NLFEKNAVSQNDLNQQERIV----YKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             F     +   L +  +       K + EL   I   +  L  I   Y E      N  
Sbjct: 272 EQFAAEVATAAKLLELYKQSSDDWSKKSHELEGVIKALETHLNQIEADYKEKLKTEQNAR 331

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +E S++  +      +++ K+T       Q 
Sbjct: 332 EEASKEAAE----LKEKLEKITAEADKDIQT 358


>gi|74314085|ref|YP_312504.1| hypothetical protein SSON_3723 [Shigella sonnei Ss046]
 gi|73857562|gb|AAZ90269.1| putative membrane protein [Shigella sonnei Ss046]
          Length = 355

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQSELDSVAKRHTRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|333006585|gb|EGK26084.1| hlyD family secretion family protein [Shigella flexneri VA-6]
          Length = 319

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 73/191 (38%), Gaps = 12/191 (6%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-EISRDLEQNQ 270
           +QN  N+Q+ +    T+    ++   ++           A  +   Y      +D+ Q +
Sbjct: 126 AQNFYNRQQGLWKSRTISAN-DLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAK 184

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +     ++L   E   +  T+++P  GT++  ++        +   +   V  ++  ++
Sbjct: 185 ASLEQAQAQLAQAELNLQDSTLIAPSDGTLLT-RAVEPGTVLNEGGTVFT-VSLTRPVWV 242

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQE 385
           RA V  + +   + G    +   +     +K +   I  + P       + +  +L+T  
Sbjct: 243 RAYVDERNLDQAQPGRKVLL---YTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDL 299

Query: 386 YYEVILKITDL 396
            Y + + +TD 
Sbjct: 300 VYRLRIVVTDA 310


>gi|326430734|gb|EGD76304.1| hypothetical protein PTSG_01006 [Salpingoeca sp. ATCC 50818]
          Length = 1716

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/205 (10%), Positives = 69/205 (33%), Gaps = 4/205 (1%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-NKYDVLEKAFESREEQLLDFLGKYHST 148
                + +D +   + + +   +T    L  +  +  D L +A    E+++     +    
Sbjct: 1335 TRLQEKLDQQHGVLLSTKSAHETIVQELGTVRRDAEDTLREAKRQHEDEVAQLNSRVQQL 1394

Query: 149  CSKVFNYGISS---VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             +++      +   V R  +       ++       E + S L          +  + + 
Sbjct: 1395 QAELEAMQTDNAARVARQREQMEAEHEALRRQLTQRERQVSELEMDAHKKDAQIKDLSSS 1454

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             E+ +     + + +  V +    ++ ++ E +    ++N   +         + E+   
Sbjct: 1455 LEETSDELAQVREAKERVDEEIARMQADLQEARKEQANLNSEKERTKQMAKEKMGEMEAK 1514

Query: 266  LEQNQRTFADEMSKLTILEKTREQK 290
            L +++       S+L    +T  +K
Sbjct: 1515 LREHEAHMRQTQSRLASAIRTYGRK 1539



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 65/200 (32%), Gaps = 14/200 (7%)

Query: 81   GTPLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G      E  + T   ++ +          +  + +      ++ ++   + ++  ++  
Sbjct: 983  GEVRKELEQTKKTKQQLEHELEKANEKVAALQQQLAERMEYISRLEIELDSHQTLLKRTH 1042

Query: 140  DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
            D   +  S            V            ++ + + D E + + L++ L   Q+ +
Sbjct: 1043 DEAQEETSKLRARLAEAEGKVMDLTHQLEREASNVNMLKADSEGQVAQLQSTLQEKQRTI 1102

Query: 200  TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            T  ++          +L + +R       EL+E +H     +    E   E  L      
Sbjct: 1103 TEQRD----------ELERMQREQDTRVRELQEKLH---AAMMENTEKVSELQLLVQQKE 1149

Query: 260  KEISRDLEQNQRTFADEMSK 279
             ++ R   + ++   D  SK
Sbjct: 1150 AQVKRAQSEKEQALVDLQSK 1169



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 75/208 (36%), Gaps = 5/208 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             + +       ++ +V  + LR   +  ++ L+        L++    RE  L   L + 
Sbjct: 842  EYSEQRQKQQEEMVRVLEEQLREQQEELEAQLEDQGGIISSLKQDLREREADLNSQLAER 901

Query: 146  HSTCSKVFNYGISSVYRSLKMKL--TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                  +                  T++R             S L   L S    L   K
Sbjct: 902  EGMIRDLTAKVERGTEAQKYASEMKTKLRDQESELETSRTHISSLSRKLESQVDLLETTK 961

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
              ++K     NDL  Q+  +   T E+R+ + + K   + +    ++AN + A   ++++
Sbjct: 962  AAYDKTVKRLNDLLVQKESI---TGEVRKELEQTKKTKQQLEHELEKANEKVAALQQQLA 1018

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
              +E   R   +  S  T+L++T ++  
Sbjct: 1019 ERMEYISRLEIELDSHQTLLKRTHDEAQ 1046



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 68/196 (34%), Gaps = 6/196 (3%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +V+   L+   + +K  L     +   + +   + +  + ++  K     +        +
Sbjct: 730 RVAFAKLKKRAEEQKKELSKFMERIGTVAERMYTTQRAMCEYDVKVKHDRALQEEQRRRA 789

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK----NLFEKNAVSQND 215
                + +L     + L R + E +   ++  L   Q+    +K     L +    S+  
Sbjct: 790 EVARKQEEL--QAKLDLERQEQEQQMQRVKHELDLAQQQQETLKRELDELLKVKEYSEQR 847

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
             QQE +V     +LRE   E +  L     +      +      +++  L + +    D
Sbjct: 848 QKQQEEMVRVLEEQLREQQEELEAQLEDQGGIISSLKQDLREREADLNSQLAEREGMIRD 907

Query: 276 EMSKLTILEKTREQKT 291
             +K+    + ++  +
Sbjct: 908 LTAKVERGTEAQKYAS 923


>gi|320168117|gb|EFW45016.1| MYO6 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1417

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 76/204 (37%), Gaps = 16/204 (7%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + +++ S   L+  ++ E+++       +   +++ ++   Q L           +
Sbjct: 949  VEGDLRVERESKTALQTRLEAERASHQKEIAAFAAAQQSDKATVMQEL-----------Q 997

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
              +   +++  +L+    R R +   R  LE   +  RA     + D     +  E +  
Sbjct: 998  QASAARTALESTLRDTEERKRQLETERSLLEKSLADERASHEKFKADSHAAASSLESDL- 1056

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE--LYDEANLEFANYLKEISR-DLEQ 268
             +  + + E  V + + +L      + +    + E     E++L+F N  K +   DL  
Sbjct: 1057 -RAQIARLEAQVAQLSSQLSTETAARTSAESLLAETKRVAESDLQFVNTQKSVVEDDLSA 1115

Query: 269  NQRTFADEMSKLTILEKTREQKTI 292
             +   A    +L  L +  E  TI
Sbjct: 1116 TRMRIASLEGELAALSERAEMATI 1139


>gi|170025934|ref|YP_001722439.1| RND family efflux transporter MFP subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186893852|ref|YP_001870964.1| RND family efflux transporter MFP subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|169752468|gb|ACA69986.1| efflux transporter, RND family, MFP subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186696878|gb|ACC87507.1| efflux transporter, RND family, MFP subunit [Yersinia
           pseudotuberculosis PB1/+]
          Length = 353

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 87/263 (33%), Gaps = 15/263 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GIIKK     GS++  G  L   +        D  K +++N++  + + K        +Y
Sbjct: 33  GIIKKRLFTEGSEVTAGQVLYQIDPASYQAAYDTAKAALQNVQVSVKSAK----LKAQRY 88

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L K     ++   D    Y    + V     +     + +  T++R+    R+ + + 
Sbjct: 89  AALAKENGVSQQDADDAQTSYQQALANVAEKTAALETARINLAYTQVRAPISGRIGISSV 148

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +    AL++++Q          +   V     + Q   + K      + +      L   
Sbjct: 149 TPG--ALVTANQTTALATIRNLDPIYVDLTQSSAQLLALRKQQQAGNDTVANAPVQLTLE 206

Query: 245 NELY--DEANLEFANYLKEISRDLEQNQRTFADEMSKL-------TILEKTREQKTILSP 295
           +      E +L+      + +      +  F +   +L         +        IL+P
Sbjct: 207 DGSVYAHEGSLQLTEVAVDEATGAVTLRAKFPNPEHQLLPGMFVRASVRNGVNNTAILAP 266

Query: 296 IAGTIVYNQSFSSSNYAQQSQPL 318
             G     +  +++    Q Q +
Sbjct: 267 QQGITHDAKGNATALVVNQQQQV 289


>gi|146218435|gb|AAI39881.1| Si:dkey-204a24.2 protein [Danio rerio]
          Length = 1165

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 11/210 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS-- 150
             + I   +  +  LR  +  E+SA   L      LE+  +  + ++ D   +   +    
Sbjct: 954  NERITRCREQVDQLRSELMQERSARHDLEMDKSALERQIKELKSRIADMGTQSRPSAGVT 1013

Query: 151  ------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MK 203
                  +     + S  R         R +     D+       R   +  +  L++ +K
Sbjct: 1014 MLENKVQELEDRLRSEEREKNTIQAAQRRLDRKLKDVTATLDQERNQHAEQRDQLSLRVK 1073

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L  +   S+ ++ + E +  K   EL E    Q  +   +N + +E   +     +   
Sbjct: 1074 ALKRQLDESEGEVERLEGVRRKVLRELEEQRELQAALQAKVNAMDNELKRKIQQSRRSTL 1133

Query: 264  RDL--EQNQRTFADEMSKLTILEKTREQKT 291
                    +  ++D  S  +IL  +  Q T
Sbjct: 1134 GSTLSSDEEDNYSDTKSITSILTDSPLQTT 1163



 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 83/235 (35%), Gaps = 22/235 (9%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY----DVLEKAF 131
             + +    L  +  ET    +  K + +         K+ +D L N+     + L KA 
Sbjct: 646 DSLKKAQSELEKQKAETLKKQEELKSATRASEKRETELKAEIDRLINQLKKEKEELSKAI 705

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYR-SLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           E  ++ L+    K   +  ++         R +   +L        +   LE ++  L+ 
Sbjct: 706 EKTQQPLVSDQTKDPESNLELQEANARLRERIARMTRLHSSVPDSSSSDALEEENRSLKT 765

Query: 191 LLSSHQKDLTMM--------------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
            L   ++  + +              +   E     ++DL +Q+R++ +S  ++ +   E
Sbjct: 766 QLEESRRAASRLGVEKEELNRRLEEREREREALRRGKSDLEEQKRLLDRSLDKINK---E 822

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++M+    +       +   +     R+L+  QR   D + +L   +   +   
Sbjct: 823 MESMMGDSRQSVQVLQSQLEEFRDRSRRELQDAQRLSKDRLVELQRAQALLKTTQ 877



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 83/237 (35%), Gaps = 31/237 (13%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            PL++ +  +    ++L++ +   LR  I         + +         E+R  +    
Sbjct: 710 QPLVSDQTKDPESNLELQEAN-ARLRERIARMTRLHSSVPDSSSSDALEEENRSLKTQLE 768

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             +  ++           + R L+ +     ++   + DLE +  LL   L    K++  
Sbjct: 769 ESRRAASR---LGVEKEELNRRLEEREREREALRRGKSDLEEQKRLLDRSLDKINKEMES 825

Query: 202 M-----------------------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           M                       + L +   +S++ L + +R         +E +   K
Sbjct: 826 MMGDSRQSVQVLQSQLEEFRDRSRRELQDAQRLSKDRLVELQRAQALLKT-TQEEVSRVK 884

Query: 239 NMLRHINELYDEANLE---FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
             L    E  D A L+    ++ LK +  +L+ ++ +  D   ++ +LE   +   I
Sbjct: 885 KELLSCTEERDSAQLDKELLSSRLKNMETELQTDRSSQTDRSREIRLLEDKVKTLEI 941



 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 46/115 (40%), Gaps = 5/115 (4%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
           T +   +     L+ +    R  L  +Q  +  ++ +  + A  ++ L QQE  + +   
Sbjct: 420 TELEQAFGRNTQLQQQLDKSRRELQENQDQMVELR-MDREGA--ESRLRQQEDQLAQLQE 476

Query: 229 ELRENIHEQ-KNMLRHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLT 281
           ELR  +    ++    ++ L  +A L  +  L++   D L Q +R        L 
Sbjct: 477 ELRRTLENSPQSDSMQLDLLTVQAELSESQLLRQKLEDTLRQRERELTALKGALK 531


>gi|85060071|ref|YP_455773.1| putative efflux transport protein [Sodalis glossinidius str.
           'morsitans']
 gi|84780591|dbj|BAE75368.1| putative efflux transport protein [Sodalis glossinidius str.
           'morsitans']
          Length = 484

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 63/167 (37%), Gaps = 4/167 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + +++S+ G ++   +V  + S   G + K     G ++ QG  L   + +    
Sbjct: 53  ARQADVPVTLSALGTVVANASV-TVTSRVDGQLLKVYFTEGQKVEQGQLLAQIDPLSYQA 111

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +   + S+   +  + + +  L     L  +  +  +  E++   +  + G   S  ++
Sbjct: 112 SLAQYQGSLAQNQALLKSAQLTLARYQKLYAQDSLSRQDLETQTATMGQYAGAIKSYQAQ 171

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
           +    +   Y  +   ++    + L       +SS   ++++  Q  
Sbjct: 172 IDAAKLDLEYARITAPVSGRVGLRLVDPGNMVRSSDTTSIVTITQTQ 218



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 70/225 (31%), Gaps = 26/225 (11%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM---LRHINELYDEANLEFANYL 259
           + + +   ++Q D    +  + +    L +N    K+    L    +LY + +L   +  
Sbjct: 93  QKVEQGQLLAQIDPLSYQASLAQYQGSLAQNQALLKSAQLTLARYQKLYAQDSLSRQDLE 152

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP-- 317
            + +  + Q         +++   +   E   I +P++G +   +     N  + S    
Sbjct: 153 TQTAT-MGQYAGAIKSYQAQIDAAKLDLEYARITAPVSGRV-GLRLVDPGNMVRSSDTTS 210

Query: 318 LMKIVPHSKLTYIRAKVT----PKQIQHVKKGYTATVRFPHYADIREKKF-KAIIEKIDP 372
           ++ I   ++   +   V     P  +Q +      T+              +  +  I  
Sbjct: 211 IVTIT-QTQPIAVTFSVPQANLPTLLQALHHDQ--TLTATALDQDGTTVLAEGELNFISN 267

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            I     +++               F++ + +L       V    
Sbjct: 268 EIDSDTGSIKL-----------KAMFANKDEKLYPNQFVNVRLQT 301


>gi|317503657|ref|ZP_07961674.1| HlyD family secretion protein [Prevotella salivae DSM 15606]
 gi|315665178|gb|EFV04828.1| HlyD family secretion protein [Prevotella salivae DSM 15606]
          Length = 327

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 85/219 (38%), Gaps = 16/219 (7%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A +  + ++ I+G+IG +T   L   + ++   GE+   +  V  K P  G I + +V+ 
Sbjct: 13  AIIAFILVVVIVGLIGFLT---LGREDDTI--QGEVEVSEYRVSCKLP--GRIVELRVKE 65

Query: 75  GSQILQGTPLLTFE--DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           G  +  G  L   E  +I+    +     +       +    +  + +   ++++++A  
Sbjct: 66  GDFVHVGDTLAILEIPEIDAQKKVAQAAGAATQALQDLTDAGARKEQIQGAFELVQQA-- 123

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              +   +   K ++    ++N G+ S  +         ++        +++  + +   
Sbjct: 124 ---KAAAEITKKTYTRMQNLYNEGVISGQK-RDEAFAAFKASEAQVKAAQSQYDMAKNGA 179

Query: 193 SSHQKDLTMMKNLFEKNAVSQN-DLNQQERIVYKSTLEL 230
            S +K +        K+AV     L ++   V +   E+
Sbjct: 180 RSQEKRIAASNAQAAKSAVDVVSSLLKETVQVSQVEGEV 218


>gi|270261301|ref|ZP_06189574.1| hypothetical protein SOD_a05310 [Serratia odorifera 4Rx13]
 gi|270044785|gb|EFA17876.1| hypothetical protein SOD_a05310 [Serratia odorifera 4Rx13]
          Length = 394

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 58/132 (43%), Gaps = 4/132 (3%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           +  IE +V ++G++   + V  + +  SG +K  +V+ G ++ QG P+   +D+   + +
Sbjct: 43  VGDIENAVLATGKMDAVERV-NVGAQVSGQVKSLKVKLGDRVAQGQPIADIDDLPQRNDL 101

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK---YHSTCSKVF 153
              + ++   +  +  +++ L    +++   ++        L DF        +T +++ 
Sbjct: 102 RNAEAALNVAKADLQAKQALLKQAESRFKRQKRMLNDEASSLEDFEAAEATLTTTRAELI 161

Query: 154 NYGISSVYRSLK 165
                 V   ++
Sbjct: 162 ALNARIVQAQIE 173



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 68/230 (29%), Gaps = 28/230 (12%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQN 269
            +NDL   E  +  +  +L+      K             N E +     +     L   
Sbjct: 97  QRNDLRNAEAALNVAKADLQAKQALLKQAESRFKRQKRMLNDEASSLEDFEAAEATLTTT 156

Query: 270 QRTFADEMSKLTILE-------KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           +       +++   +              IL+P+ G ++             +Q    IV
Sbjct: 157 RAELIALNARIVQAQIEVDKKKVDLSYTRILAPMNGIVIAV-ITQQGQTVNANQSAPTIV 215

Query: 323 PHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             +   L  I+A+++   I  V +G  A        + R       +E     + + D+ 
Sbjct: 216 KLARLDLMTIKAQISEADITRVSQGQKAYFTIFSDPEKRYDATLRTVELAPESVMKDDSL 275

Query: 381 LQTQE-----------YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +             YY  +L + +    DN + +     A+V      
Sbjct: 276 SGSSSASGSGTSNASVYYNALLDVPNP---DNRLRIA--MTAQVSLLLGE 320


>gi|156976338|ref|YP_001447244.1| hypothetical protein VIBHAR_05111 [Vibrio harveyi ATCC BAA-1116]
 gi|156527932|gb|ABU73017.1| hypothetical protein VIBHAR_05111 [Vibrio harveyi ATCC BAA-1116]
          Length = 376

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 70/232 (30%), Gaps = 23/232 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   +  +   +K        +  +  + E+      A     Q++    +  F++ A +
Sbjct: 99  YQAEVDKLRAKVKEASQGALGLESSVQEAESAVIKALAERDKAQREFDRYQRGFDRGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L+ + +    +   L   + + K     I                 +  ++      
Sbjct: 159 EQQLDTRRQAFKAAQAALE--VAQSKQKQAQIA----------------LDSEVGGENTQ 200

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
            A  +++L   E   EQ  + +P  G +                 P+M  V      Y  
Sbjct: 201 VASLLAELRKAEFNLEQTVVTAPTDGYVTQLALRPGVMAVPLPLAPVMTFVHTEDKLYTA 260

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           A      +Q ++ G+ A   F        K FK  +  + P I +     + 
Sbjct: 261 A-FRQNSLQRLEAGFEAEFMFRALP---GKVFKGQVVDVLPAIGESQFQARG 308



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 49/147 (33%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G + +  V+    + +G  L   + I     +D  +  +K        L   +   +SA+
Sbjct: 72  GRVIEVPVQPNQPLQKGDVLFRIDPIPYQAEVDKLRAKVKEASQGALGLESSVQEAESAV 131

Query: 118 DFLNNKYDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                + D  ++ F+  +       F  +   T  + F    +++  +   +     ++ 
Sbjct: 132 IKALAERDKAQREFDRYQRGFDRGAFTEQQLDTRRQAFKAAQAALEVAQSKQKQAQIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                   + + L A L   + +L   
Sbjct: 192 SEVGGENTQVASLLAELRKAEFNLEQT 218


>gi|218529042|ref|YP_002419858.1| efflux transporter RND family, MFP subunit [Methylobacterium
           chloromethanicum CM4]
 gi|240141874|ref|YP_002966382.1| putative efflux protein [Methylobacterium extorquens AM1]
 gi|218521345|gb|ACK81930.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           chloromethanicum CM4]
 gi|240011816|gb|ACS43041.1| putative efflux protein [Methylobacterium extorquens AM1]
          Length = 508

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 57/175 (32%), Gaps = 16/175 (9%)

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           E+   A    AN   + +R   QN     + ++++  + K     T  SP  G ++   +
Sbjct: 255 EINAAAAQLIANPGFDGARRRLQNLNVSEEVINEMERIRKVPMAITWTSPRDGLVLQRTA 314

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                 A     L +I       ++ A V    +  VK G   +VR           F  
Sbjct: 315 V-EGMKAAAGDTLFRIG-DISTLWVLADVPEYDLGSVKVGQPVSVRVRSLPGR---SFTG 369

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +  I P ++ Q           V +++      + +  L     A+V      T
Sbjct: 370 KVGLIYPQVNTQTRTT------RVRIELP-----NPDGVLLPDMYADVEIGTGAT 413


>gi|37678222|ref|NP_932831.1| membrane-fusion protein [Vibrio vulnificus YJ016]
 gi|37196961|dbj|BAC92802.1| membrane-fusion protein [Vibrio vulnificus YJ016]
          Length = 368

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  +    + +  L+ +  ++ I +P +G I   ++     Y Q       IV     
Sbjct: 142 EAEANYYSLKADIESLKASIARREIKAPFSGVI-GIRNVYLGQYLQAGS---DIVRLEDT 197

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V    I  +  G    +    Y       FK  I  I+P ++ Q   +Q Q 
Sbjct: 198 SVMRLRFTVPQNDISRINLGQEVDIFVDAYPQN---PFKGSITAIEPAVNIQSGLIQIQ- 253

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +++ +LR+G  A    
Sbjct: 254 ----------ADIPNSDGKLRSGMFARANI 273



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 1/141 (0%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G I     V  I +  SG+IK+ + E+G+Q+ +G PL+  +       +   +  
Sbjct: 57  VIEAIGFIEPNQGV-TIANETSGVIKQIRFESGTQVKEGQPLVLLDSDVEKANLKSSEAK 115

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +          +      +   +  ++A  +      D      S   +      S V  
Sbjct: 116 LPAAEAKYKRYQGLFKKGSISKEAYDEAEANYYSLKADIESLKASIARREIKAPFSGVIG 175

Query: 163 SLKMKLTRMRSIYLNRLDLEN 183
              + L +      + + LE+
Sbjct: 176 IRNVYLGQYLQAGSDIVRLED 196


>gi|281347939|gb|EFB23523.1| hypothetical protein PANDA_009486 [Ailuropoda melanoleuca]
          Length = 1255

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 62/189 (32%), Gaps = 6/189 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS-- 150
               +  + S      H+   +   + L    + LE++    + Q+ D  G         
Sbjct: 804 ASRSNTSEQSQLGAELHVKALQEEKEKLRESIEELEQSVTRLQRQIADVKGDEAKAKEML 863

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K        +  +L       R     R  LE++   ++  LS   ++   +    +   
Sbjct: 864 KECERESRQLEEALVQARKEEREATSVRRSLESELEDVQRNLSQATQEQKQLSEKLKDET 923

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD----EANLEFANYLKEISRDL 266
             +  L + +  +      L + I + +  +  I E+      E   +   Y ++  R+L
Sbjct: 924 EQKEQLRRLKNEMENERWHLDKTIEKLQKEMADIVEVSRISTLELQNQLDEYKEKNRREL 983

Query: 267 EQNQRTFAD 275
            + QR   +
Sbjct: 984 AEMQRQLKE 992



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 80/226 (35%), Gaps = 4/226 (1%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V+N   + +    +     E     D K      L+  ++  +  L     +   ++
Sbjct: 625 QLEVKNQQNMKEERERMRVSLEELQGQHDSKVEENSVLQQRLEKSEGELRKNLEELFQVK 684

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E  + Q+ D   +      +  +    S  R     +  +     +  DL       
Sbjct: 685 MEREQHQTQIRDLQDQLSEMHDE-LDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQ 743

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQN-DLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             LL   +++LT +K   ++   S + ++++ +         LRE++ E      ++  L
Sbjct: 744 EDLLRKRERELTALKGALKEEVASHDLEMDKLKEQYDAELQVLRESVEEATKASHNVEVL 803

Query: 248 YDEANL-EFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKT 291
              +N  E +    E+  + L++ +    + + +L       +++ 
Sbjct: 804 ASRSNTSEQSQLGAELHVKALQEEKEKLRESIEELEQSVTRLQRQI 849



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 72/204 (35%), Gaps = 8/204 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++ +  +  +L ++  +     ++ EKS L  +      L+      EE+L D+    
Sbjct: 971  QLDEYKEKNRRELAEMQRQLKEKTLEAEKSRLTTMK-----LQDEMRLMEEELRDYQRAQ 1025

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                +K     +    + L+ +L     +  +R  L  +     + L    ++     +L
Sbjct: 1026 DEALTK--RQLLEQTLKDLEYELEAKSHLKDDRSRLVKQMEDKVSQLEMELEEERNNSDL 1083

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIH-EQKNMLRHINELYDEANLEFANYLKEISR 264
              +      +  +Q R        +++++  ++ ++ R   +L         +Y      
Sbjct: 1084 LSERITRSREQLEQMRSELLQERAVKQDLECDKISLERQNKDLKSRIIHLEGSYRSSKEG 1143

Query: 265  DLEQNQRTFADEMSKLTILEKTRE 288
             + Q +   A+   +L   E+ R 
Sbjct: 1144 LVVQMEARIAELEDRLESEERDRA 1167


>gi|170023665|ref|YP_001720170.1| RND family efflux transporter MFP subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186896122|ref|YP_001873234.1| RND family efflux transporter MFP subunit [Yersinia
           pseudotuberculosis PB1/+]
 gi|169750199|gb|ACA67717.1| efflux transporter, RND family, MFP subunit [Yersinia
           pseudotuberculosis YPIII]
 gi|186699148|gb|ACC89777.1| efflux transporter, RND family, MFP subunit [Yersinia
           pseudotuberculosis PB1/+]
          Length = 401

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 79/256 (30%), Gaps = 28/256 (10%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              S  ++AL  +  + +   + + E  +   QN L   E  +     +    I  QKN 
Sbjct: 68  AQVSGQIKALHVTLGQQVEKNQLVAEIDDLAQQNALKDAEEALKNVQAQRAAKIATQKNN 127

Query: 241 LR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE-------KTREQKT 291
                  +      +        I   LE  Q   +   +++   E              
Sbjct: 128 QLTYQRQQQILAKGVGVRADFDSIKATLEATQAEISALDAQIAQAEIAVSTAKLNLGYTK 187

Query: 292 ILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA- 348
           I SPIAGT+V             Q +  ++K V       + A+++   +  VK G    
Sbjct: 188 ISSPIAGTVVAIPVEEGQTVNAVQSAPTIIK-VAQLDTMTVEAQISEADVVKVKTGMPVY 246

Query: 349 -------TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--YYEVILKITDLAFS 399
                    RF       E    +I ++     S   ++  +    YY  +  + +   +
Sbjct: 247 FTILGEPEKRFSATLRAIEPAPDSINDETTTTSSSTSSSSSSSTAIYYNGLFDVANPTGA 306

Query: 400 DNNIELRNGFPAEVLF 415
                LR    A+V  
Sbjct: 307 -----LRISMTAQVYI 317



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 17/153 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V + G I  +  V  + +  SG IK   V  G Q+ +   +   +D+   + +   
Sbjct: 48  LEQTVLADGTIKAQKQV-TVGAQVSGQIKALHVTLGQQVEKNQLVAEIDDLAQQNALKDA 106

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++KN++                     K    +  QL     +              S
Sbjct: 107 EEALKNVQAQRAA----------------KIATQKNNQLTYQRQQQILAKGVGVRADFDS 150

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +  +L+     + ++       E   S  +  L
Sbjct: 151 IKATLEATQAEISALDAQIAQAEIAVSTAKLNL 183


>gi|121634340|ref|YP_974585.1| hypothetical protein NMC0484 [Neisseria meningitidis FAM18]
 gi|120866046|emb|CAM09784.1| hypothetical protein NMC0484 [Neisseria meningitidis FAM18]
 gi|325131781|gb|EGC54482.1| chromosome segregation protein SMC [Neisseria meningitidis M6190]
 gi|325137671|gb|EGC60248.1| chromosome segregation protein SMC [Neisseria meningitidis ES14902]
          Length = 1161

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 74/198 (37%), Gaps = 25/198 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +   EQ      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSL--AAADKATEQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E           Y++E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENEL--------YVEEKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKT 286
                A+   +L  LE+T
Sbjct: 359 WAMQVAEHEERLPELEET 376


>gi|161522905|ref|YP_001585834.1| secretion protein HlyD family protein [Burkholderia multivorans
           ATCC 17616]
 gi|189348264|ref|YP_001941460.1| HlyD family secretion protein [Burkholderia multivorans ATCC 17616]
 gi|160346458|gb|ABX19542.1| secretion protein HlyD family protein [Burkholderia multivorans
           ATCC 17616]
 gi|189338402|dbj|BAG47470.1| HlyD family secretion protein [Burkholderia multivorans ATCC 17616]
          Length = 357

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/361 (11%), Positives = 95/361 (26%), Gaps = 79/361 (21%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +    V+ G  +  G PL               ++ +  L+  +D  ++         
Sbjct: 58  GRVTAMLVDEGDFVTAGQPLA--------------RMDVVVLQAQLDEARA--------- 94

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
                    RE+Q ++                      S+  ++ + RS       +  +
Sbjct: 95  ---------REQQAVNTAA-------------------SIDAQVAQRRSDKAAAAAVVVQ 126

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                + L +  + L   + L    A S  +L+            LR  ++  +  +   
Sbjct: 127 R---ESELDAATRRLARSETLSRDGASSLQELDDDR----ARAGSLRATVNAARAQVEAA 179

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               D    +       ++       R  AD                + SP  G + Y +
Sbjct: 180 QAAVDATRAQLVAARSAVTAAQATVARVRAD-----------IADSELTSPRDGRVQY-R 227

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
              S         ++ +V  S   Y+   +    +  V  G    +         E    
Sbjct: 228 IAESGEVLPAGGKVLNVVDLSD-VYMTFFLPEAVVGRVPLGADVRIVLDA---APEYVIP 283

Query: 365 AIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           A +  +         + +    + +  + V  +I       +   ++ G P         
Sbjct: 284 ARVSYVSSTAQFTPKTVETATERQKLMFRVKARIDRDLLQRHLKLVKTGLPGVAWLKTDP 343

Query: 420 T 420
            
Sbjct: 344 R 344


>gi|21673388|ref|NP_661453.1| ABC-type export system, membrane fusion protein [Chlorobium tepidum
           TLS]
 gi|21646486|gb|AAM71795.1| ABC-type export system, membrane fusion protein [Chlorobium tepidum
           TLS]
          Length = 314

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 52/166 (31%), Gaps = 19/166 (11%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIE----------------ISVSSSGEILNE---DNVVE 58
           K +  ++I GI+  +  +  + +                   + ++G I +       V 
Sbjct: 4   KLLIGIAIFGILLGLGAAFFMKLRPKSEPPAFTPASNPYRSGIYANGIIESAQKNGTNVN 63

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I    SG + K  V  G Q+  G PLL  +D       +  K SI      +   ++   
Sbjct: 64  IYPEVSGTVLKIFVHEGQQVKAGEPLLALDDAVQRSTTESAKASIAVAEATLANVQAQYA 123

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            L   +++  ++             +      ++      +    L
Sbjct: 124 KLKASWNLDPRSVSKDALDTAANAVRAGKASLELARKQYDAARALL 169


>gi|83766089|dbj|BAE56232.1| unnamed protein product [Aspergillus oryzae]
          Length = 1229

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 67/211 (31%), Gaps = 10/211 (4%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL---------- 142
             +ID ++  + +++  +   K     L  K   LE      +  L +            
Sbjct: 690 RQIIDDQRTELLSVKEELRLAKREEAALTEKVQALEDEVVVLQANLEEEREYAKGRMQKG 749

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
              H    +        +   L      +  +  +  DLE +   L+A L   Q  +   
Sbjct: 750 SSDHDNRLQNLISEKQKLRDQLANAHVELHDLRTSVADLEAERDELQAQLDQAQHQVDDT 809

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
               ++    +    + E  + +   E    +  ++ + + ++   + A +E      EI
Sbjct: 810 TKFDKEKVELRKSTLRLEGELKRLREEKSSLVEAKEALEKQLSSEVERATIEENRLAVEI 869

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            +  ++ Q T      +LT  +   ++    
Sbjct: 870 DQLQDKLQATSGVRDRELTSAKSKNQRLERR 900



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 71/215 (33%), Gaps = 9/215 (4%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  +        + S   L   +   +     L    + LEK   S  E+      +   
Sbjct: 808  DTTKFDKEKVELRKSTLRLEGELKRLREEKSSLVEAKEALEKQLSSEVERATIEENRLAV 867

Query: 148  TCSKV---FNYGISSVYRSLKMKLTRMRSIYLNRLDLEN---KSSLLRALLSSHQKDLTM 201
               ++            R L    ++ + +     +LE    +  L     S+   DL+M
Sbjct: 868  EIDQLQDKLQATSGVRDRELTSAKSKNQRLERRVQELEALLEQQPLGEQEHSTANADLSM 927

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +++  ++    +  L Q+E     S    +  I E +  L  I     E +   A+   +
Sbjct: 928  LRHNLDEARKREKTLLQREADQKASVRSCKSRIAELERELHDIMMRKFEDHSPHASPSDK 987

Query: 262  ISRDLEQNQRTFAD---EMSKLTILEKTREQKTIL 293
            +  +L   ++  ++    + +L    +  E+  + 
Sbjct: 988  LHEELRSLRKQLSEAHRTLRELKSKNRDLERAAMR 1022



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 74/246 (30%), Gaps = 27/246 (10%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G         +     E        +   + LR   D +   ++ L ++ + LE +  
Sbjct: 282 RRGQLDETSQREMDLMREELESKDQRVRELQEELRDAKDRQSEEIEKLRDEIEDLEASLR 341

Query: 133 SREEQLLDFL--------------GKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYL 176
            +E  + +                G      S++      +  +  SL    +  R   +
Sbjct: 342 EKERTIDERDEELEELKDKDSKENGALAELESELLRAREQMEELQDSLDQAKSEAREARV 401

Query: 177 N----RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +    + D E     L+ L           K L  +     + L ++ R + +    L+E
Sbjct: 402 SESRAKSDKEEAEKNLQELHDEMANKSISTKGLTRQLEEKSSKLEEELRTLQEQNSVLKE 461

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEI-------SRDLEQNQRTFADEMSKLTILEK 285
            +  +     H+ E Y  A     +  +++          L   Q+      ++L     
Sbjct: 462 ELERKAQNEAHLEEQYRRAQQSMDDEGQKLHNDAALARHQLNIAQQERDALSAQLQEALD 521

Query: 286 TREQKT 291
             ++KT
Sbjct: 522 EIQRKT 527



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 68/208 (32%), Gaps = 3/208 (1%)

Query: 72   VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            V+    +L+  PL   E       + + + ++   R    T               +   
Sbjct: 901  VQELEALLEQQPLGEQEHSTANADLSMLRHNLDEARKREKTLLQREADQKASVRSCKSRI 960

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               E +L D + +     S   +     ++  L+    ++   +    +L++K+  L   
Sbjct: 961  AELERELHDIMMRKFEDHSPHASPS-DKLHEELRSLRKQLSEAHRTLRELKSKNRDLER- 1018

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
             +  ++D   +  L   + +    L  +         ELR  +   +   R       EA
Sbjct: 1019 AAMREEDQRDLHELLRSSTLEAESLALKVSERDARLSELRAQVRRIRE-ERAFCARKAEA 1077

Query: 252  NLEFANYLKEISRDLEQNQRTFADEMSK 279
             ++    L+E    L +   + +D  S+
Sbjct: 1078 AIKDLESLQERHNQLAEKTGSKSDSKSR 1105



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 75/242 (30%), Gaps = 28/242 (11%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G ++     L   +        D     ++     I  +    + L  ++  L      
Sbjct: 487 EGQKLHNDAALARHQLNIAQQERDALSAQLQEALDEIQRKTEEKELLQTRHYALTDESGG 546

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVY----------RSLKMKLTRMRSIYLNRLDLEN 183
            +++L     +       + +    ++             ++     + ++     D E 
Sbjct: 547 LQDELAQAQARIRELQHSINDTKEHALENADTIRTQYREEIERLQEEIEALNHEIEDKEG 606

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQKN 239
           + +L +    S ++ L + K+  E  A     +   L Q E  +     +L+E I  +K 
Sbjct: 607 QFALEQDRWESTKRALQLQKDRAEDQAAGFKRTIEKLEQVEHTLTGKESKLQEVIDSEKA 666

Query: 240 --------MLRHINELYDEANLEFA------NYLKEISRDLEQNQRTFADEMSKLTILEK 285
                   + R + EL DE   +          L  +  +L   +R  A    K+  LE 
Sbjct: 667 RHFNSEAVLSRQVKELNDELLSKRQIIDDQRTELLSVKEELRLAKREEAALTEKVQALED 726

Query: 286 TR 287
             
Sbjct: 727 EV 728



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 70/190 (36%), Gaps = 7/190 (3%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           +  I+ L+  I+     ++    ++ + +  +ES +  L           +  F   I  
Sbjct: 584 REEIERLQEEIEALNHEIEDKEGQFALEQDRWESTKRALQ-LQKDRAEDQAAGFKRTIEK 642

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +   ++  LT   S     +D E         + S Q     +K L ++    +  ++ Q
Sbjct: 643 L-EQVEHTLTGKESKLQEVIDSEKARHFNSEAVLSRQ-----VKELNDELLSKRQIIDDQ 696

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
              +     ELR    E+  +   +  L DE  +  AN  +E      + Q+  +D  ++
Sbjct: 697 RTELLSVKEELRLAKREEAALTEKVQALEDEVVVLQANLEEEREYAKGRMQKGSSDHDNR 756

Query: 280 LTILEKTREQ 289
           L  L   +++
Sbjct: 757 LQNLISEKQK 766



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 72/230 (31%), Gaps = 31/230 (13%)

Query: 91  ETTDLIDLKKVSIKNLRCHI------DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +    ++  +V  + LR  +      +T +  +D +  + +  ++     +E+L D   +
Sbjct: 262 QAERDLEAYRVQFQELREKLRRGQLDETSQREMDLMREELESKDQRVRELQEELRDAKDR 321

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR--------------LDLENKSSLLRA 190
             S   +     I  +  SL+ K   +                      +LE++    R 
Sbjct: 322 -QSEEIEKLRDEIEDLEASLREKERTIDERDEELEELKDKDSKENGALAELESELLRARE 380

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH----------EQKNM 240
            +   Q  L   K+   +  VS++     +    K+  EL + +            Q   
Sbjct: 381 QMEELQDSLDQAKSEAREARVSESRAKSDKEEAEKNLQELHDEMANKSISTKGLTRQLEE 440

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                E       E  + LKE      QN+    ++  +         QK
Sbjct: 441 KSSKLEEELRTLQEQNSVLKEELERKAQNEAHLEEQYRRAQQSMDDEGQK 490


>gi|327480730|gb|AEA84040.1| efflux transporter, membrane fusion protein, putative [Pseudomonas
           stutzeri DSM 4166]
          Length = 299

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 64/189 (33%), Gaps = 23/189 (12%)

Query: 208 KNAVSQNDLNQQERI--------VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              V++  +   +R+        + ++  +L  +  +   + R       +        L
Sbjct: 55  SGLVTELRVRDNQRVTRGQVLFVIDRARFQLAVDEAQATVLERRAQLEQAQREARRNRVL 114

Query: 260 KEISR----DLEQNQRTFADEMSKLT-----ILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           K++      ++   Q   A+           + +   E+ T+LSP+ G  + +Q+    +
Sbjct: 115 KDLIAAETVEIGDTQVKRAEAALATAEAALGVAQLDLERTTVLSPVDGY-LGDQTMRVGD 173

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
           Y +   P++ IV  +    +       ++  +  G    +          +  +  ++ I
Sbjct: 174 YVKTGTPVLSIV-DTNSLRVEGYFEETKLHAIGIGQPVDIHV----MGETQHLRGHVQSI 228

Query: 371 DPIISQQDN 379
              I  +D 
Sbjct: 229 AAGIEDRDR 237



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 31/79 (39%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              ++V++    SG++ + +V +  ++ +G  L   +       +D  + ++   R  ++
Sbjct: 43  VHADIVQVAPDVSGLVTELRVRDNQRVTRGQVLFVIDRARFQLAVDEAQATVLERRAQLE 102

Query: 112 TEKSALDFLNNKYDVLEKA 130
             +          D++   
Sbjct: 103 QAQREARRNRVLKDLIAAE 121


>gi|302847602|ref|XP_002955335.1| hypothetical protein VOLCADRAFT_96190 [Volvox carteri f.
           nagariensis]
 gi|300259407|gb|EFJ43635.1| hypothetical protein VOLCADRAFT_96190 [Volvox carteri f.
           nagariensis]
          Length = 1765

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 72/191 (37%), Gaps = 8/191 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +       +  I  LR  +   ++ L     +   LE     R  Q    L        
Sbjct: 126 RSDAEGRELQQRITGLRSELLETQTKLSVALQRAADLESRV-VRLAQQNAALALRVGELE 184

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +      +S  R+ +    RMR++     + +   + L+A L+  +  L +++    +  
Sbjct: 185 EHMREQAASAGRAAEEARERMRALEAAADEDQLLIAKLQAQLAERESQLAVLR----EGE 240

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
               ++ +Q +       EL   +  ++  L+ + +   EA    A   + ++++LE+ +
Sbjct: 241 SELQEVLEQSKAAAAQLGEL---LASRETELQQLRKQLAEAERRGAQETERLTQELEELE 297

Query: 271 RTFADEMSKLT 281
                E+++L+
Sbjct: 298 AVRGVEVAQLS 308


>gi|260778858|ref|ZP_05887750.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260605022|gb|EEX31317.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 400

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 77/217 (35%), Gaps = 27/217 (12%)

Query: 204 NLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           ++ +K   ++Q D +Q +  + K+   L     +   +L  + +  D  + +    LK+ 
Sbjct: 79  DVVKKGELIAQLDDDQAKAELDKAESSLALAESKLDRVLALLKKQPDSMSAQDVEELKQ- 137

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
                Q     AD   K T      +   +++P  G  + N + S  +  + +  L+ ++
Sbjct: 138 -----QANLARADFRQKKT----DMQNYQLIAPFDGQ-LTNFTHSVGSRVEAATALVSLI 187

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  +   ++  ++   K G   ++    Y D     F   +  I P++ +      
Sbjct: 188 KLD-PVEVHYSISQSEVGKAKLGQAVSLTVDAYQDQT---FTGKVNYIAPLVDESSG--- 240

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                   ++I    F +    L  G  A+V  T   
Sbjct: 241 -------RVEI-HAHFDNPENALVPGMFAKVSQTIGE 269



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 10/88 (11%), Positives = 30/88 (34%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K  +  +G  + +G  +   +D +    +D  + S+      +D   + L    +    
Sbjct: 70  LKSLKFSDGDVVKKGELIAQLDDDQAKAELDKAESSLALAESKLDRVLALLKKQPDSMSA 129

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +     ++  L     +   T  + + 
Sbjct: 130 QDVEELKQQANLARADFRQKKTDMQNYQ 157


>gi|255319728|ref|ZP_05360936.1| auxiliary transport protein, membrane fusion protein family
           [Acinetobacter radioresistens SK82]
 gi|255303257|gb|EET82466.1| auxiliary transport protein, membrane fusion protein family
           [Acinetobacter radioresistens SK82]
          Length = 337

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 82/253 (32%), Gaps = 12/253 (4%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +    LD+E   S L    +   +    +      +  SQ ++   E+   +    +  
Sbjct: 80  DVARQALDVEQAKSDLAKAKAGLAEAEAALAQSHANSIKSQANIRLAEKNAQRYASLMNG 139

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKT 291
            I +Q+            A  E      + ++  + Q +       S++ + E    +  
Sbjct: 140 AISKQEQDQMFAVRDQARAEHEQMQAAIQQAQATIRQQKALIEAATSQVHLAELNLHRSA 199

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           +++P  GT+         NY +  Q +  +V   +  Y+       ++  +  G  ATV+
Sbjct: 200 VIAPADGTLSNFDMR-PGNYVKSGQAVAALV-DRQQLYVVGYFEETKLDRIHVGDKATVQ 257

Query: 352 FPHYADIREKKFKAIIEKI--------DPIISQQDNNLQTQEYY-EVILKITDLAFSDNN 402
               +       + I   I          +++  +           V +KI      +N 
Sbjct: 258 LMGDSKKIYGHVQGIATGIEDRERGNSSNLLANVNPTFSWVRLAQRVPVKIMIDKLPENR 317

Query: 403 IELRNGFPAEVLF 415
           + L +G  A V  
Sbjct: 318 LTLVSGRTATVRI 330



 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 51/144 (35%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V+++ S  SG++ +  V++   + +G  L   +       ++  K  +   +  + 
Sbjct: 44  VKGDVMQVSSDVSGLVTEVLVQDNQTVKKGQVLFKIDVARQALDVEQAKSDLAKAKAGLA 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++AL   +      +      E+    +    +   SK     + +V    + +  +M
Sbjct: 104 EAEAALAQSHANSIKSQANIRLAEKNAQRYASLMNGAISKQEQDQMFAVRDQARAEHEQM 163

Query: 172 RSIYLNRLDLENKSSLLRALLSSH 195
           ++          +   L    +S 
Sbjct: 164 QAAIQQAQATIRQQKALIEAATSQ 187


>gi|161950086|ref|YP_403948.2| macrolide transporter subunit MacA [Shigella dysenteriae Sd197]
 gi|309783996|ref|ZP_07678640.1| macrolide-specific efflux protein macA [Shigella dysenteriae 1617]
 gi|308928139|gb|EFP73602.1| macrolide-specific efflux protein macA [Shigella dysenteriae 1617]
          Length = 349

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 66/202 (32%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAAMEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
                + N  LR    A+V   
Sbjct: 283 -----NPNGLLRLDMTAQVHIQ 299



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 51/138 (36%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D          K     I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAAMEMAVK--QAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|116062139|dbj|BAF34700.1| fast skeletal myosin heavy chain isoform mMYH-5 [Oryzias latipes]
          Length = 1936

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 84/211 (39%), Gaps = 12/211 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            E+ + ++ K  S++  +  +  E   L    +  N+    L+K   + ++ L ++  KY 
Sbjct: 1404 ESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYE 1463

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             + +++   G     RSL  +L +M++ Y   LD   +   ++    + Q++++ +    
Sbjct: 1464 ESQAEL--EGAQKEARSLSTELFKMKNSYEEALD---QLETMKRENKNLQQEISDLTEQI 1518

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             +   S ++L + ++ V     E++  + E +  L H         LE      EI R L
Sbjct: 1519 GETGKSIHELEKAKKSVETEKSEIQTALEEAEGTLEHEEAKILRVQLELNQVKGEIDRKL 1578

Query: 267  EQNQRTFADEM---SKLTILEKTREQKTILS 294
             +             ++    ++     + S
Sbjct: 1579 AEKDEELEQIKRNSQRVIESMQSTLDAEVRS 1609



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 76/234 (32%), Gaps = 23/234 (9%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1208 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEGVAKSKGNLEKMCRTLEDQLSELKAKN 1265

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +     ++ +        T          + E   S L     +  + +  +K L
Sbjct: 1266 DENVRQ-----LNDLNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQIEELKRL 1320

Query: 206  FEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
             E+   ++N L               +Q     ++  EL+  + +  + +      Y+  
Sbjct: 1321 VEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETD 1380

Query: 252  NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
             ++    L+E  + L Q  +   + +  +     + E+      + G +     
Sbjct: 1381 AIQRTEELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQR--LQGEVEDLMI 1432



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K   I  L   I+ E+S    L  K   L+   
Sbjct: 1058 EGDLKLAQESIMDLENDKQQSDEKIKKKDFEISQLLSKIEDEQSLGAQLQKKIKELQARI 1117

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1118 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATSAQIEMNKKREA---- 1171

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1172 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1226

Query: 252  NLEFANYLKEIS------RDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +    +        +LE+  RT  D++S+L        ++
Sbjct: 1227 KMEIDDLSSNMEGVAKSKGNLEKMCRTLEDQLSELKAKNDENVRQ 1271


>gi|78355872|ref|YP_387321.1| hypothetical protein Dde_0825 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218277|gb|ABB37626.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 364

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 76/240 (31%), Gaps = 19/240 (7%)

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK-----------NMLRH 243
           + K +   +   +  A +     +  R       + RE +  QK              R 
Sbjct: 116 YDKLIRGARPAEKSEAWAAVRSARAIRDQALKEAKRREQLAAQKHIAPEEADRAWKDYRV 175

Query: 244 INELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
             E Y+EA   F        ++ + +         +++   E    +  + + ++GT++ 
Sbjct: 176 AAEQYEEARQRFVLVEDMFRKEDIAKASFQLQSATARVREAEAALAKTRLRATVSGTVLR 235

Query: 303 NQSFSSSNYAQQ--SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
               +           P++ I  +     +R +V  K +  V+ G  A V    Y D R 
Sbjct: 236 VNRKA-GEVFSLFYDSPVITIG-NIATLNVRVEVDEKDVARVRAGQPAYVVADAYGDTR- 292

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             F+  + +++ ++ ++         +        L        L +G   +       T
Sbjct: 293 --FEGTVTRVELVMGKKHTRTGDPAEHMDRRVREVLVTLRGTPPLVSGLRVDAYIDTGTT 350


>gi|254234361|ref|ZP_04927684.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126166292|gb|EAZ51803.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
          Length = 302

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 59/207 (28%), Gaps = 20/207 (9%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V +   EL +     +            A       +    R L   +       + L 
Sbjct: 84  AVRQREAELEQARETLRQRDEQWRRRMQLAGAVSREEVANAGRALRIARARAEAAGAALD 143

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                  +  + SP+ G +   +     +YA   +  + IV   +  ++       ++++
Sbjct: 144 QARLDLRRSELRSPVDGYVTQLRV-QPGDYAAAGRTNIFIV-DRRSFWVTGYFEETKLRN 201

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ------QDNNLQTQEYY-------E 388
           V+ G  AT++   +           +  I   ++            Q    +        
Sbjct: 202 VQVGAPATIKLMGFD----PLLDGHVASIGRGVADLNESRADSGLPQVSPNFSWIRLAQR 257

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLF 415
           V ++I +L      + L  G    V  
Sbjct: 258 VPVRI-ELDRVPAGVVLAAGMTGSVEV 283



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 44/122 (36%), Gaps = 6/122 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               V+ I    SG ++   V +  ++ +G PL   +       +  ++  ++  R   +
Sbjct: 41  VSAQVIRIAPEVSGSVEAVFVADNQRVARGDPLYRIDPRSYRLAVRQREAELEQAR---E 97

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T +   +    +  +   A     E++ +         ++    G +     L ++ + +
Sbjct: 98  TLRQRDEQWRRRMQL---AGAVSREEVANAGRALRIARARAEAAGAALDQARLDLRRSEL 154

Query: 172 RS 173
           RS
Sbjct: 155 RS 156


>gi|110634934|ref|YP_675142.1| polysaccharide export protein [Mesorhizobium sp. BNC1]
 gi|110285918|gb|ABG63977.1| polysaccharide export protein [Chelativorans sp. BNC1]
          Length = 442

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 72/222 (32%), Gaps = 13/222 (5%)

Query: 75  GSQILQGTPL---LTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLE 128
           G ++ +  PL      E I     +   ++ +      +  ++ E      +    ++ +
Sbjct: 155 GGRVRRTDPLGGYSELEQIRYVGKLGRAELEMNRSAVKQARLEAELQEKSTIELPAELQQ 214

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            + +   E +L       S  +  F   + S+     +    ++        LE K +  
Sbjct: 215 GSAKQSVEAILREEEAIFSARTDSFARQLRSLEELSALFAEEIKV-------LEEKMAAQ 267

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              +S  + +L  +  L     V+++     ERI+     +  +         + ++E  
Sbjct: 268 DRQVSIAEAELKDISKLVNSGTVTKSRETSLERILADLQSDRLDLAIASMRAKQRLSETE 327

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            +     +    EI RDL+       +   +  I  +  +  
Sbjct: 328 RDIVNLKSQRKTEIVRDLQVVNSELEELRLRREISRQLLQAT 369


>gi|71000619|ref|XP_754991.1| cytoskeleton assembly control protein Sla2 [Aspergillus fumigatus
           Af293]
 gi|66852628|gb|EAL92953.1| cytoskeleton assembly control protein Sla2, putative [Aspergillus
           fumigatus Af293]
          Length = 1043

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 5/224 (2%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++ Q   L      +T   +   +    N R   + ++  L   + +   LE+    
Sbjct: 350 EQQRLAQEQLLREQYQTQTQGRLAELERENLNARAQYERDQLMLQQYDRRVKDLEEQMAQ 409

Query: 134 REEQLLDFLGKYHSTCSKVFNYGI---SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               L +          +     +    S Y +L    +++R  +L+ L       L  A
Sbjct: 410 LTTNL-NMQNASKDEQIRALQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTTKSLKLKAA 468

Query: 191 LL-SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               + +K   + + L  KN    + + +++R ++        N  E + + R +    +
Sbjct: 469 SAQEAIEKREKLERELKTKNLELADMIRERDRALHDRDRLTGTNKEELEKLKRELRLAIE 528

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            A     +   EIS  L +  R  AD    L    +  E+ +  
Sbjct: 529 RAENAERSKGTEISTLLSKYNREMADLEEALRNKTRALEEISSR 572



 Score = 48.1 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 77/211 (36%), Gaps = 7/211 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            FE+ +       +    + LR    T+         + ++  +A   R++ +L    + 
Sbjct: 340 EFEEQQRLQAEQQRLAQEQLLREQYQTQTQGRLAELERENLNARAQYERDQLMLQQYDRR 399

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD----LTM 201
                +      +++      K  ++R++        +K   L  L S  +++    L  
Sbjct: 400 VKDLEEQMAQLTTNLNMQNASKDEQIRALQEQVNTWRSKYEALAKLYSQLRQEHLDLLQT 459

Query: 202 MKNLFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            K+L  K A +Q  + +    ER +    LEL + I E+   L   + L      E    
Sbjct: 460 TKSLKLKAASAQEAIEKREKLERELKTKNLELADMIRERDRALHDRDRLTGTNKEELEKL 519

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +E+   +E+ +     + ++++ L     +
Sbjct: 520 KRELRLAIERAENAERSKGTEISTLLSKYNR 550


>gi|327355464|gb|EGE84321.1| spindle-pole body protein [Ajellomyces dermatitidis ATCC 18188]
          Length = 1323

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 56/198 (28%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             + +  ++ +  L    D  +        + D+     E +E Q        +    + 
Sbjct: 324 AAIQENTELKVTKLTMERDLHQCKKSLRRAEQDLAGCQVELQELQAQANRRHVNENVQRE 383

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            +     +             +   + +       LR  +   Q DL     L E     
Sbjct: 384 LDQMREDLESKENELHELQEELESMKENESESLQQLREEIQDLQYDLRQKNELVENQKEE 443

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +L ++++    S  EL   +   K  L  + +  +EA  E      +    +E+ ++ 
Sbjct: 444 IENLKEKQQDEKSSVAELEAELQRAKEQLEDLQKSLEEARSEAREAKSKCEEAIEEKEQA 503

Query: 273 FADEMSKLTILEKTREQK 290
             D       +       
Sbjct: 504 VEDLKELQDEMTDKSFYT 521



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/216 (9%), Positives = 63/216 (29%), Gaps = 10/216 (4%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG---- 143
           +        + ++  + +++  +   +     L  K   LE      +  L +       
Sbjct: 775 DIASKRQAAESQRQELLSVKEELRAARREESSLREKLQALEDDIVVLQATLEEERAFAGN 834

Query: 144 ------KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                        +  N        +L      + ++ +   +LE +   L++ +   Q 
Sbjct: 835 QQKSGASDLEKQLQAANKERQVARDNLANANIEIHNLRMASAELEAERDELQSQIRRIQG 894

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +     L ++    +    + E  + +   E R  +  +  +   ++     A  E   
Sbjct: 895 QVDDTYRLDQEKIDLRKSKLRLENELSRLRDEKRTLLETKDKLQADLDNEIVRAAAEENR 954

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              EI +  ++   +      +L       E+  + 
Sbjct: 955 LSGEIDQLQDKIFMSSERRDRELVAARSKAERLELR 990



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 70/217 (32%), Gaps = 12/217 (5%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           + NG        L T  D  T +   L++  +   +  I   +  ++   ++Y       
Sbjct: 613 IRNGE--NAKDVLKTRHDALTNESASLQR-DLAQAKTRISNLEEQIEAERDQYMNDTDKL 669

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             +    LD L     +                    +  RS+ L +  +E +++  +  
Sbjct: 670 RLQHRNQLDQLHDEIESLKHDIEDREGQHATDRDRWDSLKRSLELQKEKVEQQAAGYKRT 729

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL-RENIHEQKNMLRHINELYDE 250
           +   Q   T + +  +K      ++ + E+  +    EL    I E  + +    +  + 
Sbjct: 730 IDKLQNVETTLSSREDK----LQNIIESEKQRHLQDEELLNRQIKELNDDIASKRQAAES 785

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              E  +    +  +L   +R  +    KL  LE   
Sbjct: 786 QRQELLS----VKEELRAARREESSLREKLQALEDDI 818



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 71/209 (33%), Gaps = 13/209 (6%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            + + +  S++ LR  I   +  L   N   +  ++  E+ +E+  D         +++ 
Sbjct: 407 SMKENESESLQQLREEIQDLQYDLRQKNELVENQKEEIENLKEKQQDEKSSVAELEAELQ 466

Query: 154 NY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT--------MMK 203
                +  + +SL+   +  R       +   +       L   Q ++T        + +
Sbjct: 467 RAKEQLEDLQKSLEEARSEAREAKSKCEEAIEEKEQAVEDLKELQDEMTDKSFYTKGLSR 526

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI- 262
            L EK    +++LN+  +         +    E   +   I  L ++ + E A    +I 
Sbjct: 527 QLEEKAHKLEDELNKLRKEHNVLEENFQSKTREVAMLEDEIEGLKEDLSAEKARMQDDID 586

Query: 263 --SRDLEQNQRTFADEMSKLTILEKTREQ 289
               + +  +R   D   +L   +     
Sbjct: 587 LAQHERDIARRERDDISERLHHADDDIRN 615


>gi|269138427|ref|YP_003295127.1| efflux transporter, RND family, MFP subunit [Edwardsiella tarda
           EIB202]
 gi|267984087|gb|ACY83916.1| efflux transporter, RND family, MFP subunit [Edwardsiella tarda
           EIB202]
 gi|304558453|gb|ADM41117.1| Putative RND efflux membrane fusion protein [Edwardsiella tarda
           FL6-60]
          Length = 459

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 5/143 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  +S  G +    N V ++S   G + K     G Q+  G  L   +       +   +
Sbjct: 124 DSYLSGLGTVTAS-NTVTVRSRVDGQLMKLHFTEGQQVKAGDLLAEIDPRPFQIQLQQAQ 182

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            ++      +D  +  L     +Y  L K      ++L         T + + +   +  
Sbjct: 183 GALARDTALLDNARRDLV----RYQRLAKDNLVSRQELDTQASLVAQTQASLVSDRANVD 238

Query: 161 YRSLKMKLTRMRSIYLNRLDLEN 183
              L++  +R+R+    R  L  
Sbjct: 239 SAQLQLDYSRIRAPGDGRAGLRQ 261



 Score = 36.9 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 43/123 (34%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             +      K+       V     +     R   +     +   +   ALL + ++DL  
Sbjct: 142 RSRVDGQLMKLHFTEGQQVKAGDLLAEIDPRPFQIQLQQAQGALARDTALLDNARRDLVR 201

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            + L + N VS+ +L+ Q  +V ++   L  +     +    ++     A  +    L++
Sbjct: 202 YQRLAKDNLVSRQELDTQASLVAQTQASLVSDRANVDSAQLQLDYSRIRAPGDGRAGLRQ 261

Query: 262 ISR 264
           +  
Sbjct: 262 VDE 264


>gi|251771435|gb|EES52014.1| Secretion protein (HlyD) [Leptospirillum ferrodiazotrophum]
          Length = 369

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 78/241 (32%), Gaps = 31/241 (12%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHE 236
           R+ L      +       Q    + K    +   V +  L      +  +TL+ + +  +
Sbjct: 58  RITLTADIQAINQAAIYAQVSGYLDKITVRRGYHVKKGQLLA---HINDTTLKAQYHQAQ 114

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                  +N    +A L   N + + + DL  +Q   +   + +    K      I++P 
Sbjct: 115 ANRDYVCLNAKRYKALL-AKNLVSKDAYDLANSQCRQSQ--ATVDYSRKMLSYANIVAPF 171

Query: 297 AGTIVYNQSFSSSNYAQQ--------SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
            GTI YN+                  S PL  +V  + +  I   V  + ++++  G   
Sbjct: 172 DGTI-YNRMVDPGATIPATTAALSSGSTPLFTVV-DTHIVKIVVNVPERDVRYLHLGLPV 229

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            VR   Y           I +++P +      L             ++   + +  L+ G
Sbjct: 230 QVRADAYPGEIFP---GRITRMNPALDTATRTLAV-----------EIDMDNPDGRLKPG 275

Query: 409 F 409
            
Sbjct: 276 M 276


>gi|212634610|ref|YP_002311135.1| membrane-fusion protein [Shewanella piezotolerans WP3]
 gi|212556094|gb|ACJ28548.1| Membrane-fusion protein [Shewanella piezotolerans WP3]
          Length = 446

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 90/285 (31%), Gaps = 51/285 (17%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   ++      K    +++   L   +L+    +        + DL   + L +KN +S
Sbjct: 107 YQIRLAQAQADRKALEGQLQGKALQLENLKLSLDIETNRYELVKSDLKRKETLRKKNLIS 166

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q++L+                  E++N+L    ++ D       N L  +  + +  Q  
Sbjct: 167 QSELD-----------------GERQNVLAQKQKIQD-----LNNSLNLMPNETDVLQAQ 204

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
               +S+    +   ++  I  P  G +       ++      Q L +I   +++  + A
Sbjct: 205 LLQAVSREEEAQSQLDKTEIRQPFEGRVSEVNV-ENNQVVAPQQVLARIN-GTEIMEVEA 262

Query: 333 KVTPKQIQHVKK------------------GYTATVRF--PHYADIREKKFKAIIEKIDP 372
           +++   +  + K                  G TA +      Y      K   I E +DP
Sbjct: 263 QLSLADLMTLMKTVEKPAIFDKQLPNAEALGLTAEITLKSAAYVFKWPAKISRIGETVDP 322

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
            ++     LQ ++ Y                 L NG         
Sbjct: 323 TLATVSVVLQVEQQYR-------ELKVGQAPPLVNGMFVSARIKG 360


>gi|195400805|ref|XP_002059006.1| GJ15229 [Drosophila virilis]
 gi|194141658|gb|EDW58075.1| GJ15229 [Drosophila virilis]
          Length = 428

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 75/210 (35%), Gaps = 7/210 (3%)

Query: 86  TFEDIETTDLIDLKKVS-IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           T E +E     + ++ S I+ LR  I   +S            EK  E  EEQ      +
Sbjct: 58  TLELLEALATKNERENSTIQELREKIAQLESEKLEKAEFRRRFEKELELIEEQWRSETNE 117

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                S + +     V ++  ++ +  +S  L     E+  S+    L S   D  +++ 
Sbjct: 118 LVDLVSSLQDENKRLVKQTQDLQSSSAQSSGLGASLTESIISMTNNELHSALSDTQVLQR 177

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELR------ENIHEQKNMLRHINELYDEANLEFANY 258
           L E+    +++L Q+ER +     EL       E +   +   R  ++L           
Sbjct: 178 LKEQIYKQRDELKQRERELQDKYSELEHVNIQAERLKASERDTRRRHKLMQAQVKTLCEE 237

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             +    L+   R       +L + EK  E
Sbjct: 238 RADFLAQLQDQCREINQLRKRLGLAEKENE 267


>gi|195153435|ref|XP_002017631.1| GL17207 [Drosophila persimilis]
 gi|194113427|gb|EDW35470.1| GL17207 [Drosophila persimilis]
          Length = 1352

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 85/215 (39%), Gaps = 22/215 (10%)

Query: 84  LLTFEDIETTDL-IDLKKVSIKNLRCHIDTE----KSALDFLNNKYDVLEKAFESREEQL 138
           +   ++I++ ++ +  K+  I+N R  +  E     S L+  N++   + +       QL
Sbjct: 774 IARVDEIQSKEVALQTKEQRIENERIMLQNEIRLLNSDLNRNNSELQNIRRENSLNTIQL 833

Query: 139 LDFLGKYHSTCS--KVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSH 195
            + L +        +  +  +  V   L  K+  + S  Y   +  E   + L+  L + 
Sbjct: 834 ENSLREKCDALQILQAEHAQVVEVVGQLNEKIGELTSNAYKQSMASEKYVATLKNELDAK 893

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            K   + K+  E+N   +N+L               + I E K ML  + E +D+   E 
Sbjct: 894 NKLFEIYKSTEEQNQADKNELL--------------QGIAEMKRMLSEVTEQHDKVEAEL 939

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           ++  ++ S +L +   T  D   +++   +   Q 
Sbjct: 940 SSTKQQHSSELAERDATITDLRKEISEANRLLAQS 974



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 68/208 (32%), Gaps = 34/208 (16%)

Query: 103 IKNLRCHID---TEKSAL------------------DFLNNKYDVLEKAFESREEQLLDF 141
           +  LR  +D    E+  L                  + +  + D L    E +  +L   
Sbjct: 693 VNELRAQLDQVSAERDHLLETVRSNEQIASSFRQEKNSIIEERDSLLTLIERQNAELERL 752

Query: 142 LGKYHSTCSKVFN---------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
               HS   ++ N           +  +        T+ + I   R+ L+N+  LL + L
Sbjct: 753 KEDLHSYRQQLSNAISAKCEAIARVDEIQSKEVALQTKEQRIENERIMLQNEIRLLNSDL 812

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           + +  +L  ++    +N+++   L    R    +   L+    +   ++  +NE   E  
Sbjct: 813 NRNNSELQNIR---RENSLNTIQLENSLREKCDALQILQAEHAQVVEVVGQLNEKIGELT 869

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKL 280
              A      S       +   D  +KL
Sbjct: 870 SN-AYKQSMASEKYVATLKNELDAKNKL 896


>gi|170750085|ref|YP_001756345.1| RND family efflux transporter MFP subunit [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656607|gb|ACB25662.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           radiotolerans JCM 2831]
          Length = 440

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 58/140 (41%), Gaps = 7/140 (5%)

Query: 45  SSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++ G I LNED+ V + SP++G + K  V  G  +  G  LLT E  +     +  + ++
Sbjct: 107 TAEGRIALNEDDNVPVVSPYAGRVTKVLVRAGDDVKAGDVLLTLEATDMVQAQNDYQAAV 166

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            NL+      ++ L          ++ F++    L D+    +   +      + +   +
Sbjct: 167 NNLQKQ----QALLKLDQTIAQRQQELFQAHATALKDYQSAQNDVIAA--QSDLKTAEGA 220

Query: 164 LKMKLTRMRSIYLNRLDLEN 183
           L    +R+R +     ++  
Sbjct: 221 LDAVKSRLRLLGKTDAEIAA 240



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 30/212 (14%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
              ++ L+L + I +++  L   +    +      N +     DL+  +       S+L 
Sbjct: 170 QKQQALLKLDQTIAQRQQELFQAHATALKDYQSAQNDVIAAQSDLKTAEGALDAVKSRLR 229

Query: 282 ILEKT-------------REQKTILSPIAGTIVYNQSFSSSNYAQQ-SQPLMKIVPHSKL 327
           +L KT               +  I +PIAGTIV  +      Y    S P+  I   S +
Sbjct: 230 LLGKTDAEIAAFEKKGTMSAETQIRAPIAGTIVQRKV-GIGQYLSASSDPVFVIGDLSTV 288

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             + A V   +I  ++ G     +   +       FKA +  +   +      L  +   
Sbjct: 289 WLV-ANVRESEIPKIRIGQEVEAKVAGFGAR---VFKARVNYMASSLDPATRRLAVRS-- 342

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                       + +  LR    A        
Sbjct: 343 ---------EVDNPDRVLRPEMFATYTIITGK 365


>gi|126306687|ref|XP_001364626.1| PREDICTED: similar to protein tyrosine phosphatase, receptor type,
           f polypeptide (PTPRF), interacting protein (liprin),
           alpha 4, isoform 1 [Monodelphis domestica]
          Length = 1203

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 62/201 (30%), Gaps = 10/201 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E  + ++ +   +   R  +      +  L        +     EE             +
Sbjct: 230 ELQERLEKQTFELNQARERLVALAGTVAELEEDLSTARRDLIKSEELSSRHQRDLREALA 289

Query: 151 KV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
           +       I+++ +          SI+     LEN+ +   +L    ++    ++ L E 
Sbjct: 290 QKDDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLEL 349

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    ++   + +   EL + I              +E +     +L+++   LE+
Sbjct: 350 AEQKLQQTMRKAETLPEVEAELAQRIAALTKA--------EERHGNIEEHLRQLEAQLEE 401

Query: 269 NQRTFADEMSKLTILEKTREQ 289
             +  A    +  + E   ++
Sbjct: 402 KNQELARVRQREKMNEDHNKR 422



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 25/208 (12%), Positives = 69/208 (33%), Gaps = 8/208 (3%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +  E     D  +  I  L       +     +++  D LE    ++E      L +   
Sbjct: 283 DLREALAQKDDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKES-----LHRQCE 337

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL-- 205
             ++     +    + L+  + +  ++     +L  + + L      H      ++ L  
Sbjct: 338 EKARHLQELLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEEHLRQLEA 397

Query: 206 -FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             E+       + Q+E++       L + +    +      +L+ +  +        + +
Sbjct: 398 QLEEKNQELARVRQREKMNEDHNKRLSDTVDRLLSESNERLQLHLKERMAALEEKNTLIQ 457

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTI 292
           +LE +QR   ++      L +  E+  +
Sbjct: 458 ELESSQRQIEEQQHHKGRLSEEIEKLRL 485


>gi|158520638|ref|YP_001528508.1| secretion protein HlyD [Desulfococcus oleovorans Hxd3]
 gi|158509464|gb|ABW66431.1| secretion protein HlyD [Desulfococcus oleovorans Hxd3]
          Length = 245

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 63/195 (32%), Gaps = 12/195 (6%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           + EK  V + D  +  ++V      L +   +         +     N E          
Sbjct: 50  IIEKVPVERGDRVKAGQVVAMLKAGLEKAQVDLALARLDFGKRKMLRNEELHQKQLISIH 109

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           + ++ +        +L   +   + +TI SP+ G +V  +      Y  +   +M I   
Sbjct: 110 EKDEMETEVRIMEIQLQEAQANLDLRTIYSPVNGVVVE-RHLGPGEYIGEGS-VMTIA-C 166

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                +   V       +++G  A V      D     ++  +  +D +I          
Sbjct: 167 VDPLNVEVVVPAALYGTIQEGMKAQVMP---DDPPGGSYQGRVVIVDGVIDAASGT---- 219

Query: 385 EYYEVILKITDLAFS 399
             + V +++++  + 
Sbjct: 220 --FGVRVRLSNPGYR 232



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 2/113 (1%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
            +V   G ++    VVEI S   GII+K  VE G ++  G  +   +       +DL   
Sbjct: 27  EAVLHRGLVVPS-EVVEISSQVPGIIEKVPVERGDRVKAGQVVAMLKAGLEKAQVDLALA 85

Query: 102 SIK-NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +    R  +  E+     L + ++  E   E R  ++     + +     ++
Sbjct: 86  RLDFGKRKMLRNEELHQKQLISIHEKDEMETEVRIMEIQLQEAQANLDLRTIY 138


>gi|119468713|ref|ZP_01611765.1| putative lipoprotein component of a efflux transporter
           [Alteromonadales bacterium TW-7]
 gi|119447769|gb|EAW29035.1| putative lipoprotein component of a efflux transporter
           [Alteromonadales bacterium TW-7]
          Length = 389

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 44/113 (38%), Gaps = 3/113 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT---EKSALDFL 120
           SG+I++     G  + +G  L   +D     ++   K  + + +  ++    E    + L
Sbjct: 70  SGVIEQITFNEGDLVKKGDVLFKLDDRPFAAVVASLKAQVNSAQAALEQAKSEAKRAERL 129

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
             +  +  +  ESR   L     +  +  +++ +  +   + ++   +  + S
Sbjct: 130 TERKAISTEQAESRTSVLRQREAQLAALQAQLTSAELDLEFTAIVSPIDGVIS 182



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 17/158 (10%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE-RIVYKSTLELREN 233
           Y  RL+   + +L+  +    ++      +L +K  V    L + + R        L+  
Sbjct: 53  YTTRLESPQEVALMPRVSGVIEQITFNEGDLVKKGDV----LFKLDDRPFAAVVASLKAQ 108

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL--------TILEK 285
           ++  +  L         A  E     K IS +  +++ +   +            T  E 
Sbjct: 109 VNSAQAALEQAKSEAKRA--ERLTERKAISTEQAESRTSVLRQREAQLAALQAQLTSAEL 166

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK-IV 322
             E   I+SPI G I      +  N     Q ++  IV
Sbjct: 167 DLEFTAIVSPIDGVISRANI-TKGNNIIAGQSVLTSIV 203


>gi|84998962|ref|XP_954202.1| hypothetical protein [Theileria annulata]
 gi|65305200|emb|CAI73525.1| hypothetical protein TA20215 [Theileria annulata]
          Length = 1207

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 78/207 (37%), Gaps = 8/207 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTC 149
           +  +   L+K+  +  +  I  E+  L+    + + + K  E R E++ L    +     
Sbjct: 577 QRQEQERLRKLEERLEKERIHEEQERLEKERIEQERIRKLEEQRLEKERLAEKERLDIEE 636

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN-KSSLLRALLSSHQKDLTMMKNLFEK 208
              F   +       + +  +   +   RL+ E  +   L       ++   + + L ++
Sbjct: 637 KIRFAQEVQKRLAREETERLKKERLEQERLEKERLEKERLEQQRQEQERLRKLEERLEKE 696

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL-- 266
               + +  ++ERI      E    + EQ+     + E       E   + +E+ + L  
Sbjct: 697 RIHEEQERLEKERI----EQERIRKLEEQRLEKERLAEKERLDIEEKIRFAQEVQKRLAR 752

Query: 267 EQNQRTFADEMSKLTILEKTREQKTIL 293
           E+ +R   + + +  + ++  E++ + 
Sbjct: 753 EETERLKKERLEQERLEKERLEKERLR 779



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 77/208 (37%), Gaps = 6/208 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E  +    ++  ++ L   ++ E+ A++          +    R+ +      +  +   
Sbjct: 469 ERLEQQRQEQERLRKLEERLEQERLAIEEQERLEKERIEQERIRKLEEQRLEKERLAEKE 528

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN----KSSLLRALLSSHQKDLTMMKNLF 206
           ++         + ++ +L R  +  L +  LE     K  L +  L   +++   ++ L 
Sbjct: 529 RLDIEEKIRFAQEVQKRLAREETERLKKERLEQERLEKERLEKERLEQQRQEQERLRKLE 588

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           E+    +    Q+     +   E    + EQ+     + E       E   + +E+ + L
Sbjct: 589 ERLEKERIHEEQERLEKERIEQERIRKLEEQRLEKERLAEKERLDIEEKIRFAQEVQKRL 648

Query: 267 --EQNQRTFADEMSKLTILEKTREQKTI 292
             E+ +R   + + +  + ++  E++ +
Sbjct: 649 AREETERLKKERLEQERLEKERLEKERL 676



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 67/193 (34%), Gaps = 9/193 (4%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            + E+  ++        ++K     E + L  + L +      ++    +    +  +  
Sbjct: 422 AEQERLDIEEKIRFAQEVQKRLAREETERLKKERLEQERLEKERLEKERLEQQRQEQERL 481

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
                 +   RL +E +  L +  +   +      + L ++    +  L+ +E+I +   
Sbjct: 482 RKLEERLEQERLAIEEQERLEKERIEQERIRKLEEQRLEKERLAEKERLDIEEKIRFAQE 541

Query: 228 LELRENIHEQKNMLRHI-------NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           ++ R    E + + +          E  ++  LE     +E  R LE+          + 
Sbjct: 542 VQKRLAREETERLKKERLEQERLEKERLEKERLEQQRQEQERLRKLEERLEKERIHEEQE 601

Query: 281 TILEKTREQKTIL 293
            + ++  EQ+ I 
Sbjct: 602 RLEKERIEQERIR 614



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 79/203 (38%), Gaps = 8/203 (3%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            L++  I+  +  ++ E+ A++    K +      E    +      +  +   ++    
Sbjct: 373 RLEQAGIEEEQKRLEQERLAIEE-QEKLEKERIRKEEERLEQERLEKERLAEQERLDIEE 431

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLEN----KSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                + ++ +L R  +  L +  LE     K  L +  L   +++   ++ L E+    
Sbjct: 432 KIRFAQEVQKRLAREETERLKKERLEQERLEKERLEKERLEQQRQEQERLRKLEERLEQE 491

Query: 213 QNDLNQQER-IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL--EQN 269
           +  + +QER    +   E    + EQ+     + E       E   + +E+ + L  E+ 
Sbjct: 492 RLAIEEQERLEKERIEQERIRKLEEQRLEKERLAEKERLDIEEKIRFAQEVQKRLAREET 551

Query: 270 QRTFADEMSKLTILEKTREQKTI 292
           +R   + + +  + ++  E++ +
Sbjct: 552 ERLKKERLEQERLEKERLEKERL 574



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 64/180 (35%), Gaps = 7/180 (3%)

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E+     +  +   LE+   + EEQ      +      +        + +    +  R+
Sbjct: 371 QERLEQAGIEEEQKRLEQERLAIEEQ---EKLEKERIRKEEERLEQERLEKERLAEQERL 427

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                 R   E +  L R      +K+    + L ++    + +  +Q+R   +   +L 
Sbjct: 428 DIEEKIRFAQEVQKRLAREETERLKKERLEQERLEKERL--EKERLEQQRQEQERLRKLE 485

Query: 232 ENIHEQKNMLRHINELYDE-ANLEFANYLKEISRDLEQ-NQRTFADEMSKLTILEKTREQ 289
           E + +++  +     L  E    E    L+E   + E+  ++   D   K+   ++ +++
Sbjct: 486 ERLEQERLAIEEQERLEKERIEQERIRKLEEQRLEKERLAEKERLDIEEKIRFAQEVQKR 545


>gi|332140676|ref|YP_004426414.1| putative efflux pump protein [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550698|gb|AEA97416.1| putative efflux pump protein [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 357

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 99/297 (33%), Gaps = 28/297 (9%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +R    +  R   L+++       + ++  I + ++    + +   V +I    +G I K
Sbjct: 3   ERTPDQAFARYMKLALVAFAVCFIYFVVADIRMPMTPQARVYH--QVTQISPQLNGPIIK 60

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V N   + +G  L   +D      ++  ++ +     ++  E + +D    + D ++ 
Sbjct: 61  VLVSNNQHVEKGQVLFEIDDTPYNIALEKAQIKL----ANVAQENAQIDA---QVDAMKA 113

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
              +    L++   +Y           ++++  S  +    +          E   S L+
Sbjct: 114 RIAAATAILVERKSEYQ---------RLNTLIESNVVSQQDVDKANAQLQSAEADLSALK 164

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L+           +  +    + +L  +E     +  EL       K     I     
Sbjct: 165 AELNL---------QIVARGERGERNLKYREARNALNRAELNLAYTRIKAPHEGIMANMQ 215

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSK-LTILEKTREQKTILSPIAGTIVYNQS 305
                +A     ++  ++      AD   K LT +EK    K +   I G +   Q 
Sbjct: 216 VTKGTYAKQSVPLASVVDNKLDLVADFREKSLTSVEKGVRAKVVFDAIPGKVFAAQV 272


>gi|327402459|ref|YP_004343297.1| RND family efflux transporter MFP subunit [Fluviicola taffensis DSM
           16823]
 gi|327317967|gb|AEA42459.1| efflux transporter, RND family, MFP subunit [Fluviicola taffensis
           DSM 16823]
          Length = 420

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 64/210 (30%), Gaps = 18/210 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD-EANLEFANYLKEISRDLEQ 268
            +   +  + +     S   L     E +      +E  + +  L+ A    E  +    
Sbjct: 121 VIESLEFTKLQEAYLTSKSNLEYLTTEYERQKTLNDENVNSKKALQRAKSDYETEKARNA 180

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
           + +     ++ L+         ++ +PI+G I           A+  +P+  IV  +   
Sbjct: 181 SLKKQLSTLN-LSGSGGAISTMSVKAPISGYITEVNV-KIGTNAEPGKPMFTIV-DNSKM 237

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           ++   V  K +Q VK G T         +    + K  I  I      +  +        
Sbjct: 238 HVDLLVYEKDLQKVKTGQTVRFILT---NQDNVEIKGKIFSIGKAFENETKS-------- 286

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             + +     +D  I L  G     L    
Sbjct: 287 --VAVHADILNDKQI-LIPGMYVNALIDIG 313



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 2/121 (1%)

Query: 40  IEISVSSSG-EILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +   ++++G   L   N  ++    +G+++   V  G  + +G  +   E +E T L + 
Sbjct: 74  LSAVINANGYTKLPPQNQADVSVLVTGVVRSINVIEGQFVKKGQTIAVIESLEFTKLQEA 133

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
              S  NL  ++ TE      LN++    +KA +  +        +  S   ++    +S
Sbjct: 134 YLTSKSNLE-YLTTEYERQKTLNDENVNSKKALQRAKSDYETEKARNASLKKQLSTLNLS 192

Query: 159 S 159
            
Sbjct: 193 G 193


>gi|226939017|ref|YP_002794088.1| secretion protein HlyD [Laribacter hongkongensis HLHK9]
 gi|226713942|gb|ACO73080.1| secretion protein HlyD [Laribacter hongkongensis HLHK9]
          Length = 372

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 42/148 (28%), Gaps = 5/148 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +   P+E  V +   +        + +  +G + +   + G  +  G PL   +      
Sbjct: 40  AASTPVETRVRALAMVEATHAPQVV-AEVTGRVTEVLADVGDTVKAGQPLARLD----AR 94

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   +VS       +            +   L +        + D + K H+    +  
Sbjct: 95  DVSASRVSADAEVARLTALADQASRDLRRGRELAQQGFISPSAVDDLVAKSHAASELLSA 154

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLE 182
               +           +R+    R+D  
Sbjct: 155 GRAKAGQARNDEDRAIVRAPIAGRVDAR 182


>gi|226226715|ref|YP_002760821.1| putative cation efflux protein [Gemmatimonas aurantiaca T-27]
 gi|226089906|dbj|BAH38351.1| putative cation efflux protein [Gemmatimonas aurantiaca T-27]
          Length = 432

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 16/178 (8%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           +     R +  L    +   A  L + +R   +       E+S+           ++ SP
Sbjct: 167 DLAQATRRVATLTGTTDETGARALADAARRRLRLLGASDAEISRAVAGSDPASTLSLRSP 226

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           I G+++ +         +   P+   V    +  + A+V  + +  V+ G  ATV    +
Sbjct: 227 IGGSVMESHIL-PGAAVEAGAPIFT-VADLSVIDVIAEVPERNLPQVRTGQRATVSIAAF 284

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            D+R   F+  +E++   ++ +   L        ++ +      + +  LR G  A V
Sbjct: 285 PDMR---FEGRVERLRDALNPETRTL------RAVIHVP-----NGSRRLRPGMFATV 328


>gi|242814439|ref|XP_002486369.1| anucleate primary sterigmata (ApsB), putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218714708|gb|EED14131.1| anucleate primary sterigmata (ApsB), putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 1528

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 78/220 (35%), Gaps = 4/220 (1%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            +G + + G  +              +  +        DTE+ +L+  N +      A +
Sbjct: 741 RDGGRSVAGDSIFERSASRAHARSSSRASNGTRESRMSDTERESLEVRNGELRDQVSALK 800

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              + L   L +Y +    +     + V ++ +      +         E+++  L+ L 
Sbjct: 801 LENQSLRSQLDEYIAEYEALDKAYQADVDQADEDMQMLQQERDQALQVAEHRALELQDLK 860

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              Q+++  + +  ++     ++ N+ E  +      L+    E ++    I  L ++A 
Sbjct: 861 EEAQEEIDTLGDELDQKV---DECNRMEMTLRTQEENLKTLQAEMRSASEGILRLEEDAQ 917

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                + K++ ++LE + R        L       ++ T+
Sbjct: 918 SNLRKF-KQVQQELEDSNREIESLEKSLFEANGKVQRLTV 956



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 68/200 (34%), Gaps = 4/200 (2%)

Query: 86  TFEDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
              D E   L       +  +  L+    + +S LD    +Y+ L+KA+++  +Q  + +
Sbjct: 776 RMSDTERESLEVRNGELRDQVSALKLENQSLRSQLDEYIAEYEALDKAYQADVDQADEDM 835

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                   +              +K      I     +L+ K      +  + +     +
Sbjct: 836 QMLQQERDQALQVAEHRALELQDLKEEAQEEIDTLGDELDQKVDECNRMEMTLRTQEENL 895

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           K L  +   +   + + E     +  + ++   E ++  R I E  +++  E    ++ +
Sbjct: 896 KTLQAEMRSASEGILRLEEDAQSNLRKFKQVQQELEDSNREI-ESLEKSLFEANGKVQRL 954

Query: 263 SRDLEQNQRTFADEMSKLTI 282
           +  +E +Q        +   
Sbjct: 955 TVQIESSQGEITFLREEQDA 974



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 64/201 (31%), Gaps = 24/201 (11%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
               +  + +L       K  +  L       E    + +E+L++             N  
Sbjct: 1023 QEVQRIMNDLNREASAAKDEIRRLKKTLSTREIEAATWKERLMELENGLREALGD-LNGT 1081

Query: 157  ISSVYRSLKMKLTRMRS----IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
             SS+  S+      + S    +   R  L+ K SLL++  +  +      + L       
Sbjct: 1082 RSSLLNSIIKLQKELESKSLDLESTRSKLDEKESLLQSREALLESHGLESRKLA------ 1135

Query: 213  QNDLNQQER-----------IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              DL  +ER              KS  +    I +  + +  +    ++    FA+  ++
Sbjct: 1136 --DLLDRERHARRADKNSFDQALKSQQQASRTISQHNSRISDLESARNQDRKRFASLEQQ 1193

Query: 262  ISRDLEQNQRTFADEMSKLTI 282
            +   L +    F     +L+ 
Sbjct: 1194 LKDQLSERNALFLTLWKRLSA 1214



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 82/227 (36%), Gaps = 20/227 (8%)

Query: 84   LLTFEDIETTDLIDLKKVS--IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            +L  E+   ++L   K+V   +++    I++ + +L   N K   L    ES + ++   
Sbjct: 909  ILRLEEDAQSNLRKFKQVQQELEDSNREIESLEKSLFEANGKVQRLTVQIESSQGEITFL 968

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              +  +   ++           + +++ + ++  L     E +           Q+   +
Sbjct: 969  REEQDADKIRISELDSELKTYQVNLQVEKEKAKELETRLAEERHQREVVGSKEKQEVQRI 1028

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLE--------------LRENIHEQKNMLRHINEL 247
            M +L  + + +++++ + ++ +    +E              LRE + +       +   
Sbjct: 1029 MNDLNREASAAKDEIRRLKKTLSTREIEAATWKERLMELENGLREALGDLNGTRSSLLNS 1088

Query: 248  YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              +   E  +     S DLE  +    ++ S L   E   E   + S
Sbjct: 1089 IIKLQKELESK----SLDLESTRSKLDEKESLLQSREALLESHGLES 1131


>gi|117624270|ref|YP_853183.1| multidrug efflux system subunit MdtA [Escherichia coli APEC O1]
 gi|237704531|ref|ZP_04535012.1| multidrug efflux system subunit MdtA [Escherichia sp. 3_2_53FAA]
 gi|115513394|gb|ABJ01469.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|226900897|gb|EEH87156.1| multidrug efflux system subunit MdtA [Escherichia sp. 3_2_53FAA]
          Length = 464

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 113 AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 170

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L    ++Y  L K      ++L         T  
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDL----SRYQQLAKTNLVSRQELDAQQALVSETEG 226

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 227 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 259



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 36/73 (49%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL+  + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDLSRYQQLAKTNLVSRQELDAQQALVSETEGTIKA 230

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 231 DEASVASAQLQLD 243


>gi|269965554|ref|ZP_06179669.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269829833|gb|EEZ84067.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 367

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 54/150 (36%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  +    + +  L+ T +++ I +P  G +V  ++     Y Q       IV     
Sbjct: 141 EAEANYFSLKADIESLKATIDRREIKAPFDG-VVGIRNVYLGQYLQAGT---DIVRLEDT 196

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V    I  +       +    Y D     FK  I  I+P ++ Q   +Q Q 
Sbjct: 197 SVMRLRFTVPQTDISRINIDQEVDIFVDAYPDQ---PFKGSISAIEPAVNVQSGLIQVQ- 252

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +++ +LR+G  A    
Sbjct: 253 ----------ADIPNSDGKLRSGMFARANI 272



 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 45/135 (33%), Gaps = 5/135 (3%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G I     V  + +  SG+I K   ++G+Q+  G PL+  +       +   +  
Sbjct: 56  VIEAIGFIEPNQGV-TVANETSGVIDKIAFDSGTQVKAGQPLVLLDSDVEKANLKSSQAK 114

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +          +     L  K  + ++A++  E           S  + +    I + + 
Sbjct: 115 LPAAEAKYKRYQG----LFKKGSISKEAYDEAEANYFSLKADIESLKATIDRREIKAPFD 170

Query: 163 SLKMKLTRMRSIYLN 177
            +          YL 
Sbjct: 171 GVVGIRNVYLGQYLQ 185


>gi|70730977|ref|YP_260718.1| multidrug efflux RND membrane fusion protein [Pseudomonas
           fluorescens Pf-5]
 gi|68345276|gb|AAY92882.1| multidrug efflux RND membrane fusion protein [Pseudomonas
           fluorescens Pf-5]
          Length = 367

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 90/297 (30%), Gaps = 40/297 (13%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSS 194
            Q+   + +            I + Y   +  ++ + S+   R +D+  +   +   +  
Sbjct: 18  AQISKLIAQAKVPLPPAVVTAIKAQYEEWQPSVSAVGSMKTVRGVDVTTEVGGIVRSIGF 77

Query: 195 HQ-KDLTMMKNLFEKNAVSQN-DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
              +++     L + NA S    L+  E     +   L+ +  + K           +A 
Sbjct: 78  KPGQEVAAGDLLVQLNADSDIAQLHSLEATAALAGTVLKRDRAQLKV------SAVSQAL 131

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           +E      +      + QR                 +K+I +P AG I    + +   Y 
Sbjct: 132 VEADEADLKAKLAAAEQQRAL-------------VAKKSIRAPFAGRI-GITAVNPGQYL 177

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                +  +       YI   V   Q+Q V  G + TV       + ++ F   +  ID 
Sbjct: 178 NPGDKIANLQ-TFDPIYIDFNVPQAQVQQVALGQSVTV--SA-DGLPKQTFTGRVSSIDT 233

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
                  N+             +    +    L  G  A  +  +  T   + +  P
Sbjct: 234 QFDPNTRNVTV-----------EATIDNPKRSLVPGMFARAVVASGGT--QRYLTLP 277



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 9/98 (9%), Positives = 28/98 (28%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            GI++    + G ++  G  L+          +   + +       +  +++ L      
Sbjct: 69  GGIVRSIGFKPGQEVAAGDLLVQLNADSDIAQLHSLEATAALAGTVLKRDRAQLKVSAVS 128

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
             ++E      + +L     +      K      +   
Sbjct: 129 QALVEADEADLKAKLAAAEQQRALVAKKSIRAPFAGRI 166


>gi|331673600|ref|ZP_08374363.1| multidrug resistance protein MdtA (Multidrug transportermdtA)
           [Escherichia coli TA280]
 gi|331068873|gb|EGI40265.1| multidrug resistance protein MdtA (Multidrug transportermdtA)
           [Escherichia coli TA280]
          Length = 464

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 113 AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 170

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 226

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 227 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 259



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 230

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 231 DEASVASAQLQLD 243


>gi|313224743|emb|CBY20534.1| unnamed protein product [Oikopleura dioica]
          Length = 1950

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 82/225 (36%), Gaps = 20/225 (8%)

Query: 87   FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
             E  E    +D+ K     L    +     ++ +  + ++L K     E Q+ +   +  
Sbjct: 1213 LESEEAAQDLDIMKKQKSRLESERNEALKGIESMTRQVELLTKTKVHNERQIKNLTEEKK 1272

Query: 147  STCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 +  +   I S  R +       ++      DLE  S  +   L+S Q++   +  
Sbjct: 1273 DNEKAIEEHEETIESKNRMIDNLEDEAKAASKEFKDLEYSSQGVTRQLNSLQQNHDELNR 1332

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL----- 259
            L+E+   ++  L +Q R + K    +R+    + N    + +   ++N E + +      
Sbjct: 1333 LYEQEQDAREILAKQHRELKKDYDFVRDQYEGEVNAKLEMQKALSKSNTELSEWRIKYEE 1392

Query: 260  -------------KEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                         KE+S+ L           SK+T L++ +++  
Sbjct: 1393 EAVVKNKALEDANKELSKQLHDLGDEMLAAKSKITQLDRVKDRLE 1437



 Score = 39.6 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 77/213 (36%), Gaps = 15/213 (7%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            ET + +  ++  ++     ++ + S       K ++ ++   S +E +   L      CS
Sbjct: 974  ETVERMKGERKQLEKQMASLEEDISEFKDRMTKMNIEKEKNLSEQELVNADLTSLEEKCS 1033

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL----- 205
               +    ++   +   L ++ S    R +L    + L   L    + L   + L     
Sbjct: 1034 N-LSLSKQNLEEKIHETLIKLDSETKARENLWALKTRLETDLRQKTEQLIDAQKLQSQTA 1092

Query: 206  ---------FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                     +E+ A    D   Q   + K   EL++ IH  +  +    ++   AN    
Sbjct: 1093 DGLSRHKFDYEQTATRLEDEQAQVANLQKKIKELQDAIHLLEQEVVSERDICKRANRVRD 1152

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +  ++++  LEQ + +  +   K   L   ++ 
Sbjct: 1153 DVKQDLADALEQLRISNEENSEKAVALRDNQDA 1185


>gi|294341594|emb|CAZ90011.1| Putative secretion protein HlyD [Thiomonas sp. 3As]
          Length = 412

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 55/156 (35%), Gaps = 2/156 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V ++G ++    V         ++K+  V+ G+ +  G  LL     +T+  +D  + ++
Sbjct: 52  VVATGYVITPSRVQVASEITGTVVKR-LVDRGAHVKAGQVLLELRADQTSAQLDQARAAL 110

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           + L       ++A      K  V +   + +  Q +   G   +   +     + +  + 
Sbjct: 111 RQLVEQ-SRPQAAAALAQAKVQVEQAERDLKRAQGVFDAGGGSAQQLEQAQTALRNARQQ 169

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                    ++           + L A  + + +++
Sbjct: 170 RDSAQAAYNAVAPGGAQQRVLEAALNAASAVNARNV 205



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/245 (10%), Positives = 66/245 (26%), Gaps = 24/245 (9%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                L+   + LR L+   +          +          ++ + V+ +     + + 
Sbjct: 98  QTSAQLDQARAALRQLVEQSRPQAAAALAQAKVQVEQAERDLKRAQGVFDAGGGSAQQLE 157

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           + +  LR+  +  D A   +       ++             + L        +  + + 
Sbjct: 158 QAQTALRNARQQRDSAQAAYNAVAPGGAQQRV--------LEAALNAASAVNARNVVRAG 209

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           ++G ++        +     Q L  +      T I   V  + I +++ G  A      Y
Sbjct: 210 VSGVVLARNV-EVGDTVTPGQTLFTLA-MDGATEILLPVNEQSIGNLQIGQQAQCVADAY 267

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            D     F A +  + P + +    L+      + +         +              
Sbjct: 268 PDR---SFAAQVSFLAPQVDRTTGTLEV----RLRVPSPPAWLKQD-------MTVSADI 313

Query: 416 TAKNT 420
                
Sbjct: 314 VTAQR 318


>gi|260574353|ref|ZP_05842357.1| efflux transporter, RND family, MFP subunit [Rhodobacter sp. SW2]
 gi|259023249|gb|EEW26541.1| efflux transporter, RND family, MFP subunit [Rhodobacter sp. SW2]
          Length = 386

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 17/192 (8%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             + EQ +  +   +    A +     +   ++ LE  +   A   ++L  +E  R +  
Sbjct: 138 AKLKEQGSASQAAADQAQAAAISATARVSVATQSLEAARAQLALVQAQLDNVELQRSRTQ 197

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           +++P+AG ++  ++    + A  +   M ++       +RA +  + +  +  G TAT++
Sbjct: 198 VVAPVAGEVIA-RNAQVGSVASAAGSPMFVLIRDGALELRADIAERDLLRLVPGQTATMQ 256

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
                +         +  ++P I                + I           LR+G   
Sbjct: 257 AVGSDE----PLTGTVRLVEPSIDTVTRLG------RARISIDAPD------RLRDGMFV 300

Query: 412 EVLFTAKNTTLA 423
           +           
Sbjct: 301 DAEILVAERQAL 312



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 63/200 (31%), Gaps = 10/200 (5%)

Query: 44  VSSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           V +SG +   + V  ++       I+    + G  +  G  L                 S
Sbjct: 47  VLASGLVGPVEQVQ-VQPLIEGQPIQTLAADVGDTVAAGQVLAVLSGTALDLQKSQFLAS 105

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEK-----AFESREEQLLDFLGKYHSTCSKVFNYGI 157
           +   R  I   ++ L    +  D  ++     A    +              +      +
Sbjct: 106 LAAARATIAQAEAQLLEATSSADEAQRVNVRTAKLKEQGSASQAAADQAQAAAISATARV 165

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           S   +SL+    ++  +     ++E + S  + +     + +       +  +V+    +
Sbjct: 166 SVATQSLEAARAQLALVQAQLDNVELQRSRTQVVAPVAGEVIARN---AQVGSVASAAGS 222

Query: 218 QQERIVYKSTLELRENIHEQ 237
               ++    LELR +I E+
Sbjct: 223 PMFVLIRDGALELRADIAER 242


>gi|261203921|ref|XP_002629174.1| cell polarity protein [Ajellomyces dermatitidis SLH14081]
 gi|239586959|gb|EEQ69602.1| cell polarity protein [Ajellomyces dermatitidis SLH14081]
          Length = 1471

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 73/210 (34%), Gaps = 5/210 (2%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +     + ++      + L   +D E+   + L  K   L    E R  +L +   +   
Sbjct: 899  DVGSLREAVNASSAKAELLERQLDEERDHREGLERKLLQLRAEHEERTTELENTTRRLRD 958

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              ++      +    S +           +R       +L    +++ ++ +     + +
Sbjct: 959  --AEELAETHAREAESHRAAFLAGLDRASSRDAESAAKALSEQRVAALKEQVDRANQMVK 1016

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKN---MLRHINELYDEANLEFANYLKEISR 264
             N  + N+ +++ R   +    L +   +       LR   +   + N   +N  +E+  
Sbjct: 1017 TNHQAANEASEKLRRAEERIAGLEQYQEQASREGLQLRRQLQAALKENQALSNENREVKS 1076

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILS 294
             LE +QR  +    +   L++   ++ I +
Sbjct: 1077 QLESHQRDASALAIQHGALKELLVERGITA 1106



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 64/208 (30%), Gaps = 12/208 (5%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                    K   + L   +  EK A +     ++ + K     E Q  +   +   T   
Sbjct: 793  ALASQAEMKAKAEALMSELQEEKRARELAEELHEAMSKRLSEMESQTNNLELESLRTELH 852

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN------- 204
                             + ++   +++ +L  K   L   L +H  D+  ++        
Sbjct: 853  HLQSAFREEVALRSEAESALKLAQIDKNELTQKVENLNDRLENHGTDVGSLREAVNASSA 912

Query: 205  ---LFEKNAVSQNDLNQ-QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               L E+    + D  +  ER + +   E  E   E +N  R + +  + A         
Sbjct: 913  KAELLERQLDEERDHREGLERKLLQLRAEHEERTTELENTTRRLRDAEELAETHAREAES 972

Query: 261  EISRDLEQ-NQRTFADEMSKLTILEKTR 287
              +  L   ++ +  D  S    L + R
Sbjct: 973  HRAAFLAGLDRASSRDAESAAKALSEQR 1000



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 85/282 (30%), Gaps = 42/282 (14%)

Query: 59   IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
            I+    G +K+  VE G  I   +      D   +     +   ++ L   + +   A +
Sbjct: 1090 IQH---GALKELLVERG--ITADSRRSPLLDSPGSRFGTPEHNRLRELEQQLQSSIKAHE 1144

Query: 119  FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                 ++  E+  +    + L+ L   + +           + R               +
Sbjct: 1145 ETKISFESREQEADRAYNEKLEQLENDYQSAVHYVKGTEKMLKRMKDELAKYKTQNSKLQ 1204

Query: 179  LDLENKSSLLRALLSSHQKD-----------LTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             DLE       +  S   +              +M +L EK + S  DL  Q        
Sbjct: 1205 ADLETALQKASSRSSPSHEASAQWEAERSNMQHIMSDLQEKTSSSIADLKTQ-------L 1257

Query: 228  LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK-- 285
             +LRE++   +          +    E  N  ++   DLEQ +   A   S+    E+  
Sbjct: 1258 AKLREDLTAAQAERDQSQTEQENIKRELLNITEKSREDLEQLKNENALLESRALDAEQKV 1317

Query: 286  --------------TREQKTILSPIAG---TIVYNQSFSSSN 310
                           R+ + +LS   G   T+    S +   
Sbjct: 1318 TMLLDQVESSVTNYRRQSQQVLSHSNGLSRTVSNASSNTIGG 1359


>gi|220904006|ref|YP_002479318.1| RND family efflux transporter MFP subunit [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219868305|gb|ACL48640.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 440

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 44/129 (34%), Gaps = 4/129 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             G +L   +V  + S   G + +     G ++  G  L   +       +D    ++  
Sbjct: 68  GLGTVLPSGDV-LVTSRVDGQLLRLHFAEGQRVKAGDLLAEIDPRPFQASLDQALGNLAR 126

Query: 106 LRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            +  ++  +  L     L     +  + +E++   +  + G   +  + V +  +   Y 
Sbjct: 127 DKAQLENARKDLSRYAKLVQGSFIAAQQYETQRALVRQYEGTVEADQAAVDSARLQLEYS 186

Query: 163 SLKMKLTRM 171
            +   ++  
Sbjct: 187 RITAPISGR 195


>gi|212693319|ref|ZP_03301447.1| hypothetical protein BACDOR_02831 [Bacteroides dorei DSM 17855]
 gi|212664136|gb|EEB24708.1| hypothetical protein BACDOR_02831 [Bacteroides dorei DSM 17855]
          Length = 416

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 106/314 (33%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTCSK 151
           TD I + +V       ++D E      L  K +  E     R   +  + + +  +    
Sbjct: 45  TDNIQIAEVKDDKFMEYVDVEGLVQPILTIKVNTREGGSVDRIVGEEGNMMKQGDTLLIL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                I S+         +  +     +++E KS  L+      Q ++  ++        
Sbjct: 105 TNPDLIRSIEDQRDEWEKQRITYKEKEIEMEQKSLTLKQQTLQAQYEMERLR-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        +    + E +   +  N      +L+  + +  I ++L   + 
Sbjct: 157 -KSFGLDKEEFKMGIKSKAELQVSEDEYKYKLKNTALQMESLKHDSSVTLIRKEL--LRN 213

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  KL   E+  E   + +PI G + + +  +        + + +I        I 
Sbjct: 214 DLERESKKLKRAEERLEDLIVKAPIGGQLSFVKV-TPGQQVASGESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPI-ISQQDNNLQTQE 385
             ++   I  +  G  ATV +    Y     K    + ++   +D +   +   N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATVNYQGKRYPLKITKVVPEVKDRMFDVDLVFTGEMPENVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEQA 345


>gi|195029593|ref|XP_001987656.1| GH22039 [Drosophila grimshawi]
 gi|193903656|gb|EDW02523.1| GH22039 [Drosophila grimshawi]
          Length = 2021

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 73/235 (31%), Gaps = 25/235 (10%)

Query: 82   TPLLTFED-----IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
              L+  ++               +  +  ++  ++ EK A          L +  E+ + 
Sbjct: 1139 QTLMRIDEESATKATAQKAQRELESQLAEIQEDLEAEKVARSKAEKLRRDLSEELEALKN 1198

Query: 137  QLLD------FLGKYHSTCSKVFNYGISSVYRS-----------LKMKLTRMRSIYLNRL 179
            +LLD         +  S   +       S+                     +  I     
Sbjct: 1199 ELLDSLDTTAAQQELRSKREQELAMLKKSLEEEGVSHESVLTEMRHKHAQELNGINDQLE 1258

Query: 180  DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +L    ++L     + + +   +         S+ + +++ +       EL+  + E + 
Sbjct: 1259 NLRKAKTVLEKAKGTLEAENADLATELRSVNSSRQENDRRRKQAESQIAELQVKLAEIER 1318

Query: 240  MLRHINELYDEANLE---FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                + E   +   E     N L+E         ++ ++  S+LT  ++  E++T
Sbjct: 1319 ARSELQEKCTKLQQEAENITNQLEEAELKASAAVKSASNMESQLTEAQQLLEEET 1373



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 70/208 (33%), Gaps = 14/208 (6%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E    ++  +  +      +      +D  +      +KA    E QL +      +   
Sbjct: 1118 ERRTQVEEMQAQMAKREEELTQTLMRIDEESATKATAQKAQRELESQLAEIQEDLEAE-- 1175

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            KV       + R L  +L  +++  L+ LD       LR+     Q+   + K+L E+  
Sbjct: 1176 KVARSKAEKLRRDLSEELEALKNELLDSLDTTAAQQELRS--KREQELAMLKKSLEEEGV 1233

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS------- 263
              ++ L +      +    + + +   +     + +       E A+   E+        
Sbjct: 1234 SHESVLTEMRHKHAQELNGINDQLENLRKAKTVLEKAKGTLEAENADLATELRSVNSSRQ 1293

Query: 264  ---RDLEQNQRTFADEMSKLTILEKTRE 288
               R  +Q +   A+   KL  +E+ R 
Sbjct: 1294 ENDRRRKQAESQIAELQVKLAEIERARS 1321



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 81/220 (36%), Gaps = 12/220 (5%)

Query: 85   LTFEDIETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            L  E ++    I   +  +    +    +  EK  L+   N         E + + L   
Sbjct: 1014 LQLEKVQLDAKIKKYEEDLALTDDQNQKLVKEKKLLEERANDLSQTLAEEEEKAKHLSKL 1073

Query: 142  LGKYHSTCSKVF------NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
              K+ +T +++               RS +   T +  +     +   +   ++A ++  
Sbjct: 1074 KAKHEATIAELEERMHKDQQQRQESDRSKRKIETEVADLKEQLNERRTQVEEMQAQMAKR 1133

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            +++LT      ++ + ++    + +R +     E++E++  +K       +L  + + E 
Sbjct: 1134 EEELTQTLMRIDEESATKATAQKAQRELESQLAEIQEDLEAEKVARSKAEKLRRDLSEEL 1193

Query: 256  ANYLKEISRDL---EQNQRTFADEMSKLTILEKTREQKTI 292
                 E+   L      Q   +    +L +L+K+ E++ +
Sbjct: 1194 EALKNELLDSLDTTAAQQELRSKREQELAMLKKSLEEEGV 1233



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 73/206 (35%), Gaps = 6/206 (2%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L   +      + +L++   K+ +   ++++S         D+ E+  E R +  ++ + 
Sbjct: 1070 LSKLKAKHEATIAELEERMHKDQQQRQESDRSKRKIETEVADLKEQLNERRTQ--VEEMQ 1127

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               +   +     +  +      K T  ++       L      L A   +  K   + +
Sbjct: 1128 AQMAKREEELTQTLMRIDEESATKATAQKAQRELESQLAEIQEDLEAEKVARSKAEKLRR 1187

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            +L E+    +N+L         +T   +E   +++  L  + +  +E  +   + L E+ 
Sbjct: 1188 DLSEELEALKNELLD----SLDTTAAQQELRSKREQELAMLKKSLEEEGVSHESVLTEMR 1243

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQ 289
                Q      D++  L   +   E+
Sbjct: 1244 HKHAQELNGINDQLENLRKAKTVLEK 1269



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 25/206 (12%), Positives = 70/206 (33%), Gaps = 3/206 (1%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E        +     L+   +   + L+    K     K+  + E QL +          
Sbjct: 1315 EIERARSELQEKCTKLQQEAENITNQLEEAELKASAAVKSASNMESQLTEAQQLLEEETR 1374

Query: 151  KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +    +  +  +    +    ++      + + E K + +   +   +K      +L ++
Sbjct: 1375 QKLGLSSKLRQIESEKEALQEQLEEDEEAKRNFERKLAEVTGQMQDIKKKAQEDADLAKE 1434

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                +  LN+    + +   EL           + I    ++A++E  +   ++  DLE+
Sbjct: 1435 LEEGKKRLNKDIEALQRQVTELMAQNDRLDKSKKKIQSELEDASIELESQRTKVL-DLEK 1493

Query: 269  NQRTFADEMSKLTILEKTREQKTILS 294
             Q+ F   +++   + +   Q+   +
Sbjct: 1494 KQKNFDKILAEEKAISEQIAQERDTA 1519



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 65/222 (29%), Gaps = 28/222 (12%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +  +     D      K +   I  E+   +    + +    +     ++  D +   
Sbjct: 1488 VLDLEKKQKNFDKILAEEKAISEQIAQERDTAEREAREKETKVLSVSRELDEAYDKIEDL 1547

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM--- 202
              T  K     +  V  +       +  +   +  LE++ + L+A     + DL +    
Sbjct: 1548 -ETKRKQLQNELDDVANTQGTADKNVHELEKAKRALESQLAELKAQNEELEDDLQLTEDA 1606

Query: 203  ----------------KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                            ++L  K   ++       + +     EL E   ++   +     
Sbjct: 1607 KLRLEVNMQALRSQFERDLLAKEEGAEEKRRGLVKQLRDLEAELDEERKQRTAAVA---- 1662

Query: 247  LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                A  +    LKEI   +E + +   D +     L+   +
Sbjct: 1663 ----AKKKLEGDLKEIETTMEMHNKVKEDALKHAKKLQAQVK 1700


>gi|188574862|ref|YP_001911791.1| membrane fusion protein [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188519314|gb|ACD57259.1| membrane fusion protein [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 414

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 65/192 (33%), Gaps = 11/192 (5%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +    SG +     + G ++ +G  L   +        D    + 
Sbjct: 64  ASALGTVT-ALNTVTVSPQVSGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAK 122

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +      N+      V     +++  Q+  +     +  +++ +  +   
Sbjct: 123 RQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVSANDAQMRSAQVQLQ 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   +  +  I    +D+ N  S    L++  Q     ++ ++    + + +L    
Sbjct: 183 FTRITAPIDGIAGIRG--VDVGNIVSSTSTLVTLTQ-----IRPIYVSFNLPERELQAVR 235

Query: 221 RIVYKSTLELRE 232
                + L +  
Sbjct: 236 AGQAATPLSVAA 247



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 58/179 (32%), Gaps = 12/179 (6%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEI 262
            +K   ++Q D    +    ++    R+N         +     D A  ++ +   L   
Sbjct: 97  VKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQ 156

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + Q +   +   +++   +   +   I +PI G I   +     N    +  L+ + 
Sbjct: 157 RNQVAQYEAAVSANDAQMRSAQVQLQFTRITAPIDG-IAGIRGVDVGNIVSSTSTLVTLT 215

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTAT-VRFPHYADIRE------KKFKAIIEKIDPII 374
              +  Y+   +  +++Q V+ G  AT +                 K   I  +I    
Sbjct: 216 -QIRPIYVSFNLPERELQAVRAGQAATPLSVAALDRGDAHVISGDGKLDVIDNRISADS 273


>gi|166710435|ref|ZP_02241642.1| membrane fusion protein precursor [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 414

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/192 (11%), Positives = 65/192 (33%), Gaps = 11/192 (5%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +    SG +     + G ++ +G  L   +        D    + 
Sbjct: 64  ASALGTVT-ALNTVTVSPQVSGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAK 122

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +      N+      V     +++  Q+  +     +  +++ +  +   
Sbjct: 123 RQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVSANDAQMRSAQVQLQ 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           +  +   +  +  I    +D+ N  S    L++  Q     ++ ++    + + +L    
Sbjct: 183 FTRITAPIDGIAGIRG--VDVGNIVSSTSTLVTLTQ-----IRPIYVSFNLPERELQAVR 235

Query: 221 RIVYKSTLELRE 232
                + L +  
Sbjct: 236 AGQAATPLSVAA 247



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 58/179 (32%), Gaps = 12/179 (6%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEI 262
            +K   ++Q D    +    ++    R+N         +     D A  ++ +   L   
Sbjct: 97  VKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQ 156

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + Q +   +   +++   +   +   I +PI G I   +     N    +  L+ + 
Sbjct: 157 RNQVAQYEAAVSANDAQMRSAQVQLQFTRITAPIDG-IAGIRGVDVGNIVSSTSTLVTLT 215

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTAT-VRFPHYADIRE------KKFKAIIEKIDPII 374
              +  Y+   +  +++Q V+ G  AT +                 K   I  +I    
Sbjct: 216 -QIRPIYVSFNLPERELQAVRAGQAATPLSVAALDRGDAHVISGDGKLDVIDNRISADS 273


>gi|107101880|ref|ZP_01365798.1| hypothetical protein PaerPA_01002925 [Pseudomonas aeruginosa PACS2]
          Length = 334

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 92/263 (34%), Gaps = 34/263 (12%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI--HEQKNML 241
           +   L   +   + +L +++     N V++  L +    +  S  +LR+     ++++ L
Sbjct: 69  EKGELLLSIDPARYELAVLRAERAVN-VARAALGESRAAIEASQAQLRQRRSEAQRRSAL 127

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTF-------ADEMSKLTILEKTREQKTILS 294
           +  + L  E N +    +     +L +NQ +            + L       E+  + +
Sbjct: 128 QKRSMLSVEENEKAQTDVSLAQAELLRNQASLGLAQANVELAEAALQQARLDLERTQVRA 187

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P++G +   Q+    +YA    PL+ +V      Y+       ++  ++ G  A V    
Sbjct: 188 PVSGYVTNLQTR-EGDYAHAGVPLLALV-DRDSFYVSGYFEETKLPGIRVGSRARVELMS 245

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQT------QEYYE---------VILKITDLAFS 399
                 ++F   ++ I   I+ ++N   +         Y          V + I      
Sbjct: 246 -----GERFDGRVQSIAHAITDRENAEGSRLLANINPSYTWVKLAQRIPVRIAIDPAYRQ 300

Query: 400 DNNIELRNGFPAEVLFTAKNTTL 422
            N   LR G  A +       T 
Sbjct: 301 RN--TLRAGVTATIRVLPAEDTA 321



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 50/145 (34%), Gaps = 2/145 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV + +  SG+I +  + +   + +G  LL+ +       +   + ++   R  + 
Sbjct: 42  VRADVVTLSADVSGLITRLPLSDNQPVEKGELLLSIDPARYELAVLRAERAVNVARAALG 101

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++A++   ++  + ++  E++    L          ++     +S     L      +
Sbjct: 102 ESRAAIE--ASQAQLRQRRSEAQRRSALQKRSMLSVEENEKAQTDVSLAQAELLRNQASL 159

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQ 196
                N    E      R  L   Q
Sbjct: 160 GLAQANVELAEAALQQARLDLERTQ 184


>gi|92113564|ref|YP_573492.1| secretion protein HlyD [Chromohalobacter salexigens DSM 3043]
 gi|91796654|gb|ABE58793.1| secretion protein HlyD [Chromohalobacter salexigens DSM 3043]
          Length = 376

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 62/213 (29%), Gaps = 19/213 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
                ++ +      +        LR   E       +  +    I  D+E  Q   A  
Sbjct: 88  LAAGDLLIRLDDSAEQAELRAARALRQERENAVRRARQLQDRNVGIRADVEDAQAQLAQV 147

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            +++  ++       + +P AGT+   +  S          L+ +        +   V  
Sbjct: 148 NAQIDEIQSRLADHQLRAPFAGTV-GQRDLSVGALVTPGTELVTLDKLD-RMKLDFTVPA 205

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             +  +  G + +     Y    E+ F+  +  I   I     ++       V  ++ + 
Sbjct: 206 TFLGALAPGMSLSATTASYP---EQVFRGEVTSIGTRIDPVSRSVS------VRAQLPNP 256

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHP 429
             +     LR G    ++           ++ P
Sbjct: 257 ERT-----LRPGM---LMIVTLERRPRDTLVVP 281



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 36/103 (34%), Gaps = 4/103 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +   ++G ++  G  L+  +D      +     + + LR   +        L ++   
Sbjct: 77  IAELSFDDGQRLAAGDLLIRLDDSAEQAELR----AARALRQERENAVRRARQLQDRNVG 132

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +    E  + QL     +     S++ ++ + + +     +  
Sbjct: 133 IRADVEDAQAQLAQVNAQIDEIQSRLADHQLRAPFAGTVGQRD 175


>gi|83858260|ref|ZP_00951782.1| acriflavin resistance protein [Oceanicaulis alexandrii HTCC2633]
 gi|83853083|gb|EAP90935.1| acriflavin resistance protein [Oceanicaulis alexandrii HTCC2633]
          Length = 348

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 63/204 (30%), Gaps = 9/204 (4%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
              + +SG ++       + +  +G I+   +E G+ + QG  L   +D      +DL +
Sbjct: 90  SSGLVASGYVVARRQA-TVSAEITGRIRDVLIEEGAVVEQGEVLAYLDDDRARIDLDLYE 148

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 R    +  + L+      +  E+  ES      D                +S+ 
Sbjct: 149 AQESATRERAQSLAAQLNEARTVLERTERLIESGYA--TDSRRTAEQAQVDSLRAQLSAA 206

Query: 161 YRSLKMKLTRMRSI------YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              L     R+RS       ++ R           A +      ++           +  
Sbjct: 207 RADLAAAEVRVRSQRDYVDRHIVRAPFGGVVIAKNAQVGEILSPVSAGGGFTRTGIATLV 266

Query: 215 DLNQQERIVYKSTLELRENIHEQK 238
           D+   E  V  +  +++     Q+
Sbjct: 267 DMESLELEVDVNEGQIQRVSAGQR 290



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/311 (11%), Positives = 87/311 (27%), Gaps = 33/311 (10%)

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
           FL  + +        R         +  S+ S       +S    +       R      
Sbjct: 49  FLIPRPEAALVVQAERPAPSQGAQAETASSASVAPAARPASSSGLVASGYVVARRQATVS 108

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQ 237
            ++  +   +     +  +   ++  L +  A +  +    QE    +    L   ++E 
Sbjct: 109 AEITGRIRDVLIEEGAVVEQGEVLAYLDDDRARIDLDLYEAQESATRERAQSLAAQLNEA 168

Query: 238 KNMLRHINELYDEANLEFANYLKE------ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           + +L     L +      +    E      +   L   +   A    ++       ++  
Sbjct: 169 RTVLERTERLIESGYATDSRRTAEQAQVDSLRAQLSAARADLAAAEVRVRSQRDYVDRHI 228

Query: 292 ILSPIAGTIVYNQ---------SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
           + +P  G ++              +   + +    +  +V   +   +   V   QIQ V
Sbjct: 229 VRAPFGGVVIAKNAQVGEILSPVSAGGGFTRTG--IATLV-DMESLELEVDVNEGQIQRV 285

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
             G         Y D R     A +E I P   +            + +++   A  + +
Sbjct: 286 SAGQRVEAILDAYPDWR---IPAHVEAIIPTADRARAT--------IRVRV---ALGERD 331

Query: 403 IELRNGFPAEV 413
             +     A V
Sbjct: 332 ARILPDMAARV 342


>gi|322828311|gb|EFZ32185.1| hypothetical protein TCSYLVIO_1484 [Trypanosoma cruzi]
          Length = 1104

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 67/215 (31%), Gaps = 10/215 (4%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L    + E   L +  +  +  L    +     L  +       E A      +  +   
Sbjct: 459 LAVRHNAELRSLREENQQLMDQLTSAREAHAEELQQVRKNQRKSESAVTRDAAKEFETTL 518

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRS-----IYLNRLDLENKSSLLRALLSSHQKD 198
           +  +  ++     +      L  +L               ++LE   +  R      QK 
Sbjct: 519 RRMNERNEETRRALELEKGQLVRQLREAEQRCEDKQRRLEIELEKSEAARRDGERIQQKH 578

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               + L E     Q  + + +R    S  +L     + +  L  +   ++ A     + 
Sbjct: 579 DEKERALAE----LQETVEELKRKGC-SVADLSSRNRKLQQELEQLRHDHETATRAKDSE 633

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           L+E+  DL + +R       +LT   + +E+  + 
Sbjct: 634 LQELRHDLAETRRRVVGLQDELTAARRMQEEVEVR 668



 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 70/206 (33%), Gaps = 10/206 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL----EKAFESREEQLLDFLGKYH 146
           E   +       ++ L+     E ++L     +   L    E        QL     +  
Sbjct: 235 EFRAIEGQWTSRLERLQLEHINETASLRQEIERERQLVAHGESQLSETRNQLAKLTSQLE 294

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-KNL 205
             C +      S    +   ++ +     L R   E+K S  +  +   Q+ L    + L
Sbjct: 295 ELCRQREGDAHSRGTENFIGEIHQKAIERLQRAFEEDKQSTKQWFVEEQQRILNSHERTL 354

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            E     +  + + E  +  S  +LRE   E +     +     + +   A+ L+     
Sbjct: 355 HEIQDSHRAQVRRLEETLDASNRQLREMEIEVQQCKTKLAGAALKPSSASADELR----- 409

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT 291
           L +  RT   ++++    ++  E+++
Sbjct: 410 LREELRTIRKQLNEAVDAKQRLERRS 435


>gi|291388656|ref|XP_002710871.1| PREDICTED: centrosomal protein 2 [Oryctolagus cuniculus]
          Length = 2507

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 71/198 (35%), Gaps = 4/198 (2%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            + +   +   ++L   ++     L     +  VLE     + + L + L +   +  +  
Sbjct: 1637 EQVKELQRQNEHLAQDLERRGQELVLQKERIQVLEDQRTLQTKLLEEDLEQIKLSLRERG 1696

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                S      +            R  LE+   +LR      +     +++L E+    +
Sbjct: 1697 RELASQRQLMQEQAEEGKGPGKAQRGSLEHLKLILRDKEKEAECQQEQIQDLQERRRQLE 1756

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
              L    R V +S+L L +   E   + RH+ E  ++  L+  ++       LE+ QR  
Sbjct: 1757 QQLQGLHRKVAESSLLLTQREQEILVLQRHLQEAREQRELKEQSFQS----QLEEAQRAV 1812

Query: 274  ADEMSKLTILEKTREQKT 291
                 +L  L++ R Q  
Sbjct: 1813 TQRDQELEALQRERRQAQ 1830



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/205 (11%), Positives = 74/205 (36%), Gaps = 4/205 (1%)

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++ +G   +  + +  T   ++ +  ++ L+  +DTE++  +   +         E   +
Sbjct: 786 EVTKGQLEVQIQTV--TQAKEVIQGEVRCLKMELDTERNQAEQERSTAARRLAQAEQEGK 843

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR-MRSIYLNRLDLENKSSLLRALLSSH 195
             L+     H    +             + +L + + S+   +L+LE +   L+    + 
Sbjct: 844 TALEQQQVAHEEEVRRLQENWEKERARHQQELAKVLESLEREKLELEMRMRELQTETEAL 903

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERI-VYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           +      +   E          ++ER+ + ++ L+ ++ + +    L  + +      L 
Sbjct: 904 RAQREEERTQAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLR 963

Query: 255 FANYLKEISRDLEQNQRTFADEMSK 279
                + +   L + Q+   +   +
Sbjct: 964 EQETTELLQAQLREAQQELKEATQQ 988



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/218 (9%), Positives = 72/218 (33%), Gaps = 2/218 (0%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +    LT + +  +   +  + S+   +      +     L  +   + +A E  +
Sbjct: 748 QAVERDRQDLTEQLLGLSSAKEQLESSLFEAQQQNSVIEVTKGQLEVQIQTVTQAKEVIQ 807

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            ++     +  +  ++      ++  R  + +     ++   ++  E +   L+   +  
Sbjct: 808 GEVRCLKMELDTERNQAEQERSTAARRLAQAEQEGKTALEQQQVAHEEEVRRLQE--NWE 865

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++     + L +     + +  + E  + +   E      +++           +  LE 
Sbjct: 866 KERARHQQELAKVLESLEREKLELEMRMRELQTETEALRAQREEERTQAESALCQMQLET 925

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                 +   L Q Q+  AD   +L  L +  + + + 
Sbjct: 926 EKERVSLLETLLQTQKELADASQQLERLRQDMKVQKLR 963



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 63/199 (31%), Gaps = 4/199 (2%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              +++ +         E+  L   + +  + E      +        +     ++     
Sbjct: 1776 REQEILVLQRHLQEAREQRELKEQSFQSQLEEAQRAVTQRDQELEALQRERRQAQGQEES 1835

Query: 157  ISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +      L+  L +  +     + +LE     +R L      +    + L E     + +
Sbjct: 1836 VKEKASELQGALEQAHTALQECQGELEEHKEQVRRLQEELSAEGRRGQALEEVLGDLRVE 1895

Query: 216  LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
              +QE+ +     +  E   E     R + + + EA        +E+     +N+ +   
Sbjct: 1896 SREQEKALLTLQQQCAERTQEHDAEARALQDKWLEAEAMLKERDQELEALRTENRFSRLQ 1955

Query: 276  EMS---KLTILEKTREQKT 291
            E +   ++  L++   +  
Sbjct: 1956 EEAAWGQVEALQEALSRAQ 1974



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 74/207 (35%), Gaps = 5/207 (2%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L    +   +    L++  ++ +    + E   +   N    V +      E +      
Sbjct: 1315 LKELHETVASLQGHLRQAELQRMEAQGERELLQVAKENLTARVEQLQASVAEARAQASAA 1374

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                   +     +      ++ +  R +++         +   L+  L+   + L+  +
Sbjct: 1375 GILEEHLRTVRSALKRKNEEVESERERAQALQEQGELKVAQGKALQENLALLTQTLSEKE 1434

Query: 204  NLFEKNAVSQNDLNQQE--RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
               E     Q ++ + E  R + K+ LEL     +++N    + +   +   +  + L+ 
Sbjct: 1435 GQVE---TLQGEILELEKQREMQKAALELLSLDLKKRNQEVDLQQEQIQELEQCRSVLEH 1491

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTRE 288
            +   +++ ++  A +  ++  LEK RE
Sbjct: 1492 LPMAVQEREQQLAVQREQIRELEKDRE 1518



 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 74/201 (36%), Gaps = 20/201 (9%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E    + +++  I+ L    +T++S L+      +   +  ES+  Q+ D   +  +   
Sbjct: 1498 EREQQLAVQREQIRELEKDRETQRSLLEHQLLDLEKKAQVIESQRGQIQDLRKQLATLEC 1557

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                   S           R+   +    +LE +  + RA L+    DL       +   
Sbjct: 1558 LALELEES---------HHRVECQHKVIEELEGQREMQRAALTQLTLDLEERSQELQ--- 1605

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
               + +++ E        EL+E   E K+    + EL  +           +++DLE+  
Sbjct: 1606 AQSSQIHELESHSTLLARELQEREQEVKSQHEQVKELQRQNEH--------LAQDLERRG 1657

Query: 271  RTFADEMSKLTILEKTREQKT 291
            +    +  ++ +LE  R  +T
Sbjct: 1658 QELVLQKERIQVLEDQRTLQT 1678


>gi|238892880|ref|YP_002917614.1| membrane fusion protein family auxiliary transport protein
           [Klebsiella pneumoniae NTUH-K2044]
 gi|238545196|dbj|BAH61547.1| membrane fusion protein family auxiliary transport protein
           [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 355

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 68/207 (32%), Gaps = 7/207 (3%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
                   + ++ ++    W +L P        SS+G I   +  V+I S  +G I    
Sbjct: 5   KKRWAGYFVGLLVVLAAAAWWLLRPPGLPAGFASSNGRIEATE--VDIASKIAGRIDTIL 62

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+ G  + QG  L   +     +        IK     +   ++ LD   ++    E   
Sbjct: 63  VKEGQFVHQGEVLARMDTRVLNEQRLEAAAQIKEAESAVLAARALLDQRQSEMRASEAVV 122

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           + R+ +L     ++    S   +   +   + L        S        + + S  RA 
Sbjct: 123 KQRQAELDSTAKRH--VRSNTLSQRGAVSAQQLDDDRAAAESARAALESAKAQVSAARAA 180

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           + + +  +   +   E    ++  +  
Sbjct: 181 IEAARTSIIQAQTRVEAAQATERRILA 207


>gi|218550525|ref|YP_002384316.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia fergusonii
           ATCC 35469]
 gi|226706826|sp|B7LRL6|AAEA_ESCF3 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|218358066|emb|CAQ90712.1| p-hydroxybenzoic acid efflux system component [Escherichia
           fergusonii ATCC 35469]
          Length = 310

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 80/236 (33%), Gaps = 33/236 (13%)

Query: 204 NLFEKNAVS--------QNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLE 254
            L +K  V         Q  L + E  V   ++  +E   E     R  +  +  E   +
Sbjct: 67  QLVKKGQVLFTIDQPRYQKALAEAEADVAYYSVLAQEKRQEASRRNRLGVQAMSREEIDQ 126

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N L+ +   L + Q T         + +   E+  I +P  G +     ++   +  +
Sbjct: 127 ANNVLQTVLHQLAKAQATR-------DLAKLDLERTVIRAPADGWVTNLNVYT-GEFITR 178

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               + +V  +   Y+ A +   +++ V+ GY A +        R    K  ++ I   +
Sbjct: 179 GSTAVALVKQN-TFYVLAYMEETKLEGVRPGYRAEI--TPLGSNR--VLKGTVDSIAAGV 233

Query: 375 SQQDNNLQTQEYYEV-----ILKITDLAFSDNNIELRN------GFPAEVLFTAKN 419
           +   +    +    +      +++         ++ +       G  A V+ T K+
Sbjct: 234 TNASSTRDAKGMATIDSNLEWVRLAQRVPVRIRLDAQPENLWPAGTTATVVVTGKD 289



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 45/154 (29%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    +   + L+ +  I     W            + +     +VV I    +G+
Sbjct: 2   KTLIRKLTRTAITLVLVILAFIAIFRAWVYYTE----SPWTRDARFSADVVAIAPDVAGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V +   + +G  L T +       +   +  +      +  EK       N+  V
Sbjct: 58  ITNVNVHDNQLVKKGQVLFTIDQPRYQKALAEAEADV-AYYSVLAQEKRQEASRRNRLGV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVLHQLAKAQATRDLAKL 150


>gi|213968937|ref|ZP_03397077.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato T1]
 gi|301382827|ref|ZP_07231245.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato
           Max13]
 gi|302062983|ref|ZP_07254524.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato K40]
 gi|302134602|ref|ZP_07260592.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213926236|gb|EEB59791.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato T1]
 gi|331015888|gb|EGH95944.1| HlyD family secretion protein [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 294

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 68/216 (31%), Gaps = 19/216 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q+      R    +  E +E   + +   +         NL     L+E      +  
Sbjct: 78  IDQDRFRLTLRQAQATVAERQETWEQARRENKR---NRGLGNLVAREQLEESQSREARAL 134

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +    +   +   ++  I SP+ G  + +++     +    +P++ +V  S   +I
Sbjct: 135 SALGESRVAVDAAQLNLDRSVIRSPVDGY-LNDRAPRDHEFVTAGRPVLSVV-DSASFHI 192

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQDN 379
                  ++  +  G    +R             +I+  I+           P ++   +
Sbjct: 193 DGYFEETKLDGIHVGQGVDIRVIGDNARLTGHVVSIVAGIEDRDRSSGSNLLPNVNPAFS 252

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            ++  +   V +   ++     N  +  G  A V  
Sbjct: 253 WVRLAQRIPVRIAFDEV---PGNFRMIAGRTATVSI 285



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           +VV+I    SG+I+K +V +   + +G  L T +       +   + ++   +   +  +
Sbjct: 46  DVVQIAPDVSGLIQKVEVTDNQPVHKGQVLFTIDQDRFRLTLRQAQATVAERQETWEQAR 105

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                     +++ +      EQL +   +     S +    ++     L +  + +RS
Sbjct: 106 RENKRNRGLGNLVAR------EQLEESQSREARALSALGESRVAVDAAQLNLDRSVIRS 158


>gi|148257445|ref|YP_001242030.1| putative accessory protein to ABC-type macrolide transport protein
           MacB [Bradyrhizobium sp. BTAi1]
 gi|146409618|gb|ABQ38124.1| putative accessory protein to ABC-type macrolide transport protein
           MacB [Bradyrhizobium sp. BTAi1]
          Length = 430

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 70/252 (27%), Gaps = 25/252 (9%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             ++A     + D    +N    N  +  ++  Q      +      N+  Q+  L    
Sbjct: 104 QKIKAGDLIGEIDSLTQQNTLRTNEAALRNVRAQRDEKIATLALAEANMARQQVTLAQKA 163

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               + +   A  +K+    + Q     A+    +           I +PI GT++    
Sbjct: 164 SSRADYDSAEAT-VKQTQAQIAQLDAQIAEAEVAIETARVNLAYTRITAPIDGTVLSI-V 221

Query: 306 FSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                     Q    IV     +   +R +++   +  VK G           D R    
Sbjct: 222 TQQGQTVNAVQSAPTIVVLGQVETMTVRVEISEADVVKVKPGQNVYFTILGDPDRRFHAT 281

Query: 364 KAII----EKIDPIISQQDNNLQTQE------------YYEVILKITDLAFSDNNIELRN 407
              I    E I    S    +  T              YY  +  +     ++ + +L  
Sbjct: 282 LGSIEPAPESIKTDSSFSSTSTTTSSSSSSSSTTSSAIYYNGVFNV-----ANPDGQLMT 336

Query: 408 GFPAEVLFTAKN 419
              AEV      
Sbjct: 337 YMTAEVHILLGE 348



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 50/140 (35%), Gaps = 3/140 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V ++G +     +V + +  SG +    VE G +I  G  +   + +   + +   
Sbjct: 69  VEQTVLATGTLKPV-KLVAVGAQASGRLVTLNVELGQKIKAGDLIGEIDSLTQQNTLRTN 127

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + +++N+R   D + + L          +     +     D+         K     I+ 
Sbjct: 128 EAALRNVRAQRDEKIATLALAEANMARQQVTLAQKASSRADYDSA--EATVKQTQAQIAQ 185

Query: 160 VYRSLKMKLTRMRSIYLNRL 179
           +   +      + +  +N  
Sbjct: 186 LDAQIAEAEVAIETARVNLA 205


>gi|329915705|ref|ZP_08276301.1| nodulation protein NolF [Oxalobacteraceae bacterium IMCC9480]
 gi|327544854|gb|EGF30229.1| nodulation protein NolF [Oxalobacteraceae bacterium IMCC9480]
          Length = 380

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 91/291 (31%), Gaps = 28/291 (9%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK---MKLTRMRSIYLNRLDLENKS 185
           +  +  E +            + VF      +   L        + ++I  +++  E + 
Sbjct: 33  RPAKPVEPEKATTPAVMELAAADVFTVVARDLRVQLPVSGALTAQQQAIVKSKVAGEVRE 92

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +L+   +   + ++ +   L   +  ++    Q      ++ L L     E  N L    
Sbjct: 93  TLVAEGIRVRRGEIVV--RLDTADLAARLAAQQAALDDARARLALANKNRENSNEL---- 146

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L  +   + A    +   DL Q     A   ++L I  +  +   + SPI G I   + 
Sbjct: 147 -LKQKFISQNALDTSQNGVDLAQAAVKSAS--AQLDIARRALDDAQVRSPIDGIISK-RY 202

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
             +   A     L  +V       + A V    I  V+ G         +       F  
Sbjct: 203 VQAGEKAAPDMALFAVV-DLSRLILEALVPASDIPRVQVGQGVRFAVDGFDAR---VFTG 258

Query: 366 IIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            + +I+P                    I  +A ++ +  L++G  A    T
Sbjct: 259 EVVRINPAAEAGS-----------RAIIVYVAVANADGALKSGMYATGGIT 298



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/186 (9%), Positives = 71/186 (38%), Gaps = 12/186 (6%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+  ++++  + + +  V       +G +++  V  G ++ +G  ++  +  +    +  
Sbjct: 69  PVSGALTAQQQAIVKSKV-------AGEVRETLVAEGIRVRRGEIVVRLDTADLAARLAA 121

Query: 99  KKVSIKNLRCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++ ++ + R  +      +   + L  +  + + A ++ +  +        S  +++   
Sbjct: 122 QQAALDDARARLALANKNRENSNELLKQKFISQNALDTSQNGVDLAQAAVKSASAQLDIA 181

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             +     ++  +  + S    +     K++   AL +       +++ L   + + +  
Sbjct: 182 RRALDDAQVRSPIDGIISKRYVQAG--EKAAPDMALFAVVDLSRLILEALVPASDIPRVQ 239

Query: 216 LNQQER 221
           + Q  R
Sbjct: 240 VGQGVR 245


>gi|307129680|ref|YP_003881696.1| macrolide-specific efflux protein [Dickeya dadantii 3937]
 gi|306527209|gb|ADM97139.1| macrolide-specific efflux protein [Dickeya dadantii 3937]
          Length = 421

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/237 (11%), Positives = 67/237 (28%), Gaps = 39/237 (16%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +     +     V  +   S   Q+   +   H +       G          +   +R 
Sbjct: 61  RDLQQTVLADGTVNARKLVSVGAQVSGQIKALHVSLGDKVKQGQLLAEIDDLTQQNTLRD 120

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                 +++ + +  +A L ++Q       +L +K   +Q D +  +  +  +  ++   
Sbjct: 121 SKAALDNIQAQRASRQATLRNNQLSWQRQHSLMQKGVGAQADYDSAKATLDATQADIDAL 180

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +       +N                                      +       I+
Sbjct: 181 DAQIVRAKIAVN------------------------------------TAQVNLGYTKIV 204

Query: 294 SPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           SP+ GT+V             Q +  + K V +     I AK++   + +V+ G   
Sbjct: 205 SPMNGTVVALPVEQGQTVNAVQSAPTIAK-VANLDTMTIEAKISEADVINVRTGMPV 260



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 57/142 (40%), Gaps = 11/142 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ +V + G + N   +V + +  SG IK   V  G ++ QG  L   +D+   + +   
Sbjct: 63  LQQTVLADGTV-NARKLVSVGAQVSGQIKALHVSLGDKVKQGQLLAEIDDLTQQNTLRDS 121

Query: 100 KVSIKNLRCHIDTEKSAL----------DFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           K ++ N++    + ++ L            L  K    +  ++S +  L        +  
Sbjct: 122 KAALDNIQAQRASRQATLRNNQLSWQRQHSLMQKGVGAQADYDSAKATLDATQADIDALD 181

Query: 150 SKVFNYGISSVYRSLKMKLTRM 171
           +++    I+     + +  T++
Sbjct: 182 AQIVRAKIAVNTAQVNLGYTKI 203


>gi|169824752|ref|YP_001692363.1| ABC transporter ATP-binding protein [Finegoldia magna ATCC 29328]
 gi|167831557|dbj|BAG08473.1| ABC transporter ATP-binding protein [Finegoldia magna ATCC 29328]
          Length = 378

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 86/226 (38%), Gaps = 16/226 (7%)

Query: 53  EDNVVEI---KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
             +V ++   ++   G ++K  V+NG  + +G  L+TF + E    ID  ++ ++  +  
Sbjct: 56  TGDVQQVYNNQAY--GEVEKVHVKNGQSVKKGDLLITFVNKEVEKQIDQMQMQLEQAKSQ 113

Query: 110 ----IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY---R 162
               ++   +A    N   +   ++F    E  +D +    +  ++ +   +  V    +
Sbjct: 114 AGYALEDRNNAYKSYNKLVEKYNESFSPELEMQIDQMEPSLNQSNRAYKQALDQVELQKK 173

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK---DLTMMKNLFEKNAVSQNDLNQQ 219
            L       R      +D   K +         Q    ++T  +N+ E   +S+ D N+ 
Sbjct: 174 QLDDLKESARKAIKATIDGTCKVNDKNIENPMSQGALIEVTSDENIIE-GNISEYDYNKL 232

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           +       + +  +   +  ++   N    +A    +N ++ ++  
Sbjct: 233 KENDNVEVIPINGDEKTKGTVVEISNTPESQAGSFGSNQMQNMTEQ 278


>gi|74001664|ref|XP_535613.2| PREDICTED: similar to Myosin heavy chain, fast skeletal muscle,
           embryonic isoform 1 [Canis familiaris]
          Length = 1118

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 83/245 (33%), Gaps = 20/245 (8%)

Query: 53  EDNVVEIKSPFSGIIKKFQV-ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
           + N+   +      ++K  +   G        L+ FE+     + +   +S  + R    
Sbjct: 167 DSNMQIEQ------LRKIMLSHEGVLQEIRAILVDFEEASGKKIYEQDSMSALHFRNLGS 220

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
                L  L+ +   L+      E+QL     +  +    +       + + +      +
Sbjct: 221 AISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRIEQLISEHEIEI 280

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
             +        ++++ +++ L   Q+      +++ +       L+  E  V +   ELR
Sbjct: 281 TGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMR------QLSDLESTVSQLRSELR 334

Query: 232 E-------NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           E        I E +  L   N    EA  E   + +E     +Q Q+  AD   +   L 
Sbjct: 335 EAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELS 394

Query: 285 KTREQ 289
             +EQ
Sbjct: 395 LEKEQ 399


>gi|84616918|emb|CAJ13812.1| HlyD family secretion protein [Desulfococcus multivorans]
          Length = 383

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 2/117 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K+  V  G ++  G  L   + ++  + I  +  S+K     +   ++  D+   + 
Sbjct: 73  GRVKRLDVHVGERVKAGQVLGEMDPVDLDERIRAQDASLKRANAQLSEAQARKDYAQTQA 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              E+  ++R         K       V   G+++    L         I   R +L
Sbjct: 133 LRYEQLLKARSTSEEVVATKQQELL--VAKAGLTAAREELSRVRAERAVIEAQRNNL 187



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/179 (9%), Positives = 61/179 (34%), Gaps = 20/179 (11%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD--------- 265
            +  Q+  + ++  +L E   + +        L  E  L+  +  +E+            
Sbjct: 103 RIRAQDASLKRANAQLSE--AQARKDYAQTQALRYEQLLKARSTSEEVVATKQQELLVAK 160

Query: 266 --LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L   +   +   ++  ++E  R   ++++P  G +V  +           Q +++++ 
Sbjct: 161 AGLTAAREELSRVRAERAVIEAQRNNLSLIAPFDGLVVS-RDADPGTTVVAGQAVVELI- 218

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK-AIIEKIDPIISQQDNNL 381
                ++  +      + +  G +A +        +  + +   + +++P+        
Sbjct: 219 DPSTLWVNVRFDQIHARGLAAGLSAQITL----RSQAGELQAGHVLRVEPLADAVTEET 273


>gi|260596346|ref|YP_003208917.1| hypothetical protein CTU_05540 [Cronobacter turicensis z3032]
 gi|260215523|emb|CBA27691.1| hypothetical protein CTU_05540 [Cronobacter turicensis z3032]
          Length = 355

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/174 (10%), Positives = 60/174 (34%), Gaps = 9/174 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWS-ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
           A   R+++ + + +      + I +P+    +    +    + V      SG +    V 
Sbjct: 9   ARWVRVSIATFLAMFVYFILADIWIPLTPDSTVMRVVTPVSSRV------SGYVAAVHVA 62

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           N + + +G  L   +    T+ ++   ++++     +  E+     +  + ++      +
Sbjct: 63  NNNHVKKGDLLFELDAAPFTNRVEAADIALRQ--ARLTNEQLDAQIVAARANLNTARLTA 120

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           R +++     +  S    V    +  V  + +     +  +     +L  +   
Sbjct: 121 RNDKVTFDRYQRLSALQNVSQQDLDKVRTTWQTSDQAVAQLEAKINELTIERGE 174



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 64/205 (31%), Gaps = 14/205 (6%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F    +     ++     +R   L    L+ +    RA L++ +      K  F++   
Sbjct: 73  LFELDAAPFTNRVEAADIALRQARLTNEQLDAQIVAARANLNTARLTARNDKVTFDRY-- 130

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
               L+  + +  +   ++R         +  +    +E  +E        +  +++ + 
Sbjct: 131 --QRLSALQNVSQQDLDKVRTTWQTSDQAVAQLEAKINELTIERGERDDNRNVTIQKYRN 188

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
              D        +       I +   GT+   Q  S   +A    P + +V         
Sbjct: 189 ALQD-------AQLNLGWTQIRAEADGTVSNLQL-SPGWFAAAGTPALALVSEHTDIV-- 238

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYA 356
           A    K ++H   G  A V F    
Sbjct: 239 ADFREKSLRHTHVGTDAAVVFDALP 263


>gi|149204092|ref|ZP_01881060.1| hypothetical protein RTM1035_11240 [Roseovarius sp. TM1035]
 gi|149142534|gb|EDM30579.1| hypothetical protein RTM1035_11240 [Roseovarius sp. TM1035]
          Length = 672

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 85/244 (34%), Gaps = 27/244 (11%)

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             V + + +    PL T E +E    I++K+ ++ +L   ++  + A+  + +    ++ 
Sbjct: 26  LAVRHDNVVTAQGPLATLEALE--AQIEVKRNTLDDLEAELEKRREAMAIVADVQAEVDG 83

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
               +EE L ++               +      +        +I + R  LE++ + LR
Sbjct: 84  LRRQKEELLAEWES-------------LRERRDEVAAVRQETEAIVIERQQLESEIAPLR 130

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A   + ++ L   + L  +     + L ++   +     +LR+   E +     ++ L  
Sbjct: 131 AEYLAVKERLEKAEELLAR----IDALKREHEEISGQVDDLRDKKRELEEAEERVSRLEA 186

Query: 250 EA------NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            A      N            +L +     A E   L   +   E   I + +A      
Sbjct: 187 RAKDLETDNARLEGRKSSHETELGELNARVASEREAL--AQTQTEHARIGAEVAAQAQDM 244

Query: 304 QSFS 307
           +  +
Sbjct: 245 RRIA 248


>gi|221069407|ref|ZP_03545512.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
 gi|220714430|gb|EED69798.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
          Length = 438

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 57/183 (31%), Gaps = 16/183 (8%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +        +++  +GI++K     GS +  G  L   ++      +   + ++   
Sbjct: 78  PGRLEPSRIAQ-VRARAAGIVQKRLFREGSDVKAGQALFEIDNTPYKANLQSAQATLAQA 136

Query: 107 RCHIDTEKSAL-------DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             ++    +         +         + A  + +  L        +  +   N G +S
Sbjct: 137 EANLAQASATARRYKPLVEANAISKQEYDTAIANEKAALAQVAAGKAAVTNANVNLGYAS 196

Query: 160 VYRSLKMKLTR--------MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V   +  ++ R        +      +L    + + L   L+    D+  M+       +
Sbjct: 197 VTAPISGRIGRALVTEGALVGQGEATQLATIQQVNPLYVNLTQSSSDIMRMREALSSGKL 256

Query: 212 SQN 214
           ++ 
Sbjct: 257 AKV 259


>gi|116074386|ref|ZP_01471648.1| hypothetical protein RS9916_38087 [Synechococcus sp. RS9916]
 gi|116069691|gb|EAU75443.1| hypothetical protein RS9916_38087 [Synechococcus sp. RS9916]
          Length = 345

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 53/171 (30%), Gaps = 9/171 (5%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM-LRHINELYDEANLEFANYL----KE 261
            +  V +    + ER+     + + +N+ +   +         D  N E   +L      
Sbjct: 36  AEGRVVKILATEGERVKAGQPILVLDNVQQSAALNASRAQAHTDRINAERYEFLYLNGAT 95

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            ++  +Q          K      T   K + SPI G +    +    +Y    Q +  I
Sbjct: 96  SAKQRDQYATQAIASRDKALADAATLGYKYVRSPIDGVVGDLDTVKLGDYVTTGQAITGI 155

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           V  +   +   ++   Q   VK G   TV             +  +  I P
Sbjct: 156 V-DNSTLWTLMQIPATQAGQVKLGQRVTV---ASQTNPPVTGEGSVSFISP 202



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/80 (15%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK----SALDFL 120
           G + K     G ++  G P+L  ++++ +  ++  +      R + +  +    +     
Sbjct: 38  GRVVKILATEGERVKAGQPILVLDNVQQSAALNASRAQAHTDRINAERYEFLYLNGATSA 97

Query: 121 NNKYDVLEKAFESREEQLLD 140
             +     +A  SR++ L D
Sbjct: 98  KQRDQYATQAIASRDKALAD 117


>gi|116062137|dbj|BAF34699.1| fast skeletal myosin heavy chain isoform mMYH-6 [Oryzias latipes]
          Length = 1935

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 84/211 (39%), Gaps = 12/211 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            E+ + ++ K  S++  +  +  E   L    +  N+    L+K   + ++ L ++  KY 
Sbjct: 1403 ESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYE 1462

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             + +++   G     RSL  +L +M++ Y   LD   +   ++    + Q++++ +    
Sbjct: 1463 ESQAEL--EGAQKEARSLSTELFKMKNSYEEALD---QLETMKRENKNLQQEISDLTEQI 1517

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             +   S ++L + ++ V     E++  + E +  L H         LE      EI R L
Sbjct: 1518 GETGKSIHELEKAKKTVETEKSEIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKL 1577

Query: 267  EQNQRTFADEM---SKLTILEKTREQKTILS 294
             +             ++    ++     + S
Sbjct: 1578 AEKDEELEQIKRNSQRVIESMQSTLDAEVRS 1608



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 73/229 (31%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1207 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKSKGNLEKMCRTLEDQLSELKAKN 1264

Query: 146  HSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                 ++         + +       +L    ++       +   +     L  H ++  
Sbjct: 1265 DENVRQLNDLNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQIEELKRHVEEEV 1324

Query: 201  MMKNLFEKNAVSQND----LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
              KN       S       L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1325 KAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1384

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   + +  +     + E+      + G +     
Sbjct: 1385 EELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQR--LQGEVEDLMI 1431



 Score = 43.1 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K   I  L   I+ E+S    L  K   L+   
Sbjct: 1057 EGDLKLAQESIMDLENDKQQSDEKIKKKDFEISQLLSKIEDEQSLGAQLQKKIKELQARI 1116

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1117 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATSAQIEMNKKREA---- 1170

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1171 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1225

Query: 252  NLEFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +    +        +LE+  RT  D++S+L        ++
Sbjct: 1226 KMEIDDLSSNMEAVAKSKGNLEKMCRTLEDQLSELKAKNDENVRQ 1270


>gi|24114745|ref|NP_709255.1| hypothetical protein SF3503 [Shigella flexneri 2a str. 301]
 gi|26250109|ref|NP_756149.1| hypothetical protein c4287 [Escherichia coli CFT073]
 gi|30065238|ref|NP_839409.1| hypothetical protein S4260 [Shigella flexneri 2a str. 2457T]
 gi|110807312|ref|YP_690832.1| hypothetical protein SFV_3488 [Shigella flexneri 5 str. 8401]
 gi|227883637|ref|ZP_04001442.1| HlyD family secretion protein [Escherichia coli 83972]
 gi|300916779|ref|ZP_07133486.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 115-1]
 gi|300985157|ref|ZP_07177294.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 45-1]
 gi|301050284|ref|ZP_07197173.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 185-1]
 gi|331685131|ref|ZP_08385717.1| putative membrane protein [Escherichia coli H299]
 gi|26110538|gb|AAN82723.1|AE016768_141 Hypothetical protein yhiI precursor [Escherichia coli CFT073]
 gi|24053964|gb|AAN44962.1| putative membrane protein [Shigella flexneri 2a str. 301]
 gi|30043500|gb|AAP19220.1| putative membrane protein [Shigella flexneri 2a str. 2457T]
 gi|110616860|gb|ABF05527.1| putative membrane protein [Shigella flexneri 5 str. 8401]
 gi|227839516|gb|EEJ49982.1| HlyD family secretion protein [Escherichia coli 83972]
 gi|281602833|gb|ADA75817.1| Auxiliary transport protein, membrane fusion protein (MFP) family
           [Shigella flexneri 2002017]
 gi|300297913|gb|EFJ54298.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 185-1]
 gi|300408186|gb|EFJ91724.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 45-1]
 gi|300415928|gb|EFJ99238.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 115-1]
 gi|307555585|gb|ADN48360.1| auxiliary transport protein [Escherichia coli ABU 83972]
 gi|313647216|gb|EFS11668.1| hlyD family secretion family protein [Shigella flexneri 2a str.
           2457T]
 gi|315291758|gb|EFU51114.1| auxiliary transport protein, membrane fusion protein family protein
           [Escherichia coli MS 153-1]
 gi|331077502|gb|EGI48714.1| putative membrane protein [Escherichia coli H299]
 gi|332749415|gb|EGJ79832.1| hlyD family secretion family protein [Shigella flexneri K-671]
 gi|332750262|gb|EGJ80673.1| hlyD family secretion family protein [Shigella flexneri 4343-70]
 gi|332751361|gb|EGJ81764.1| hlyD family secretion family protein [Shigella flexneri 2747-71]
 gi|332763532|gb|EGJ93771.1| hlyD secretion family protein [Shigella flexneri 2930-71]
 gi|332997556|gb|EGK17172.1| hlyD family secretion family protein [Shigella flexneri K-218]
 gi|333012509|gb|EGK31890.1| hlyD family secretion family protein [Shigella flexneri K-304]
          Length = 355

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|89095181|ref|ZP_01168105.1| Secretion protein HlyD [Oceanospirillum sp. MED92]
 gi|89080539|gb|EAR59787.1| Secretion protein HlyD [Oceanospirillum sp. MED92]
          Length = 432

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 89/258 (34%), Gaps = 19/258 (7%)

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
            L+  +    +  I  K  S++ +     T + +L        V           +  F+
Sbjct: 31  VLMKSKPQAPSRPISEKVWSVQTIAAQAGTHQPSLVLYG---KVESPRMTRVTAAVTAFV 87

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            + H+   K+       +   L     R+  +   + D++N  + + A    HQ DL  +
Sbjct: 88  EEVHTDEGKIIAP--DQLLIQLDDSDARL-LVDQRQADVDNYLAQIEAEKVRHQTDLKAL 144

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           K       + +N L    + V +    ++  +  Q+  L    + Y + +L      ++I
Sbjct: 145 K-------IEKNLLQLSLKTVRRYENLIKRKVSSQE-QLDSARQAYQQQSLSLTQRERDI 196

Query: 263 S---RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
           +     L Q +       S L       ++  I +P  G +      +  +  +    L+
Sbjct: 197 ADHPNRLAQLESQLKRAQSLLQAANLDLQRTQIKAPFDGRVASLSV-APGDRVRAGDALI 255

Query: 320 KIVPHSKLTYIRAKVTPK 337
            +    K   +RA++  +
Sbjct: 256 GLY-SQKRLEVRAQIPNR 272



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 79/238 (33%), Gaps = 20/238 (8%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +++   + G  I     L+  +D +   L+D ++  + N    I+ EK     + ++ D+
Sbjct: 87  VEEVHTDEGKIIAPDQLLIQLDDSDARLLVDQRQADVDNYLAQIEAEK-----VRHQTDL 141

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                E    QL     + +    K       S    L       +   L+    E   +
Sbjct: 142 KALKIEKNLLQLSLKTVRRYENLIK----RKVSSQEQLDSARQAYQQQSLSLTQRERDIA 197

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE------RIVYKSTLELRENIHEQKNM 240
                L+  +  L   ++L +    +  DL + +        V   ++   + +     +
Sbjct: 198 DHPNRLAQLESQLKRAQSLLQ---AANLDLQRTQIKAPFDGRVASLSVAPGDRVRAGDAL 254

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
           +   ++   E   +  N +    R   Q+    A       +L  T ++  I + + G
Sbjct: 255 IGLYSQKRLEVRAQIPNRVLPKLRQNNQDDAAIAQGSIDGQLLNLTLDR--IAAEVNG 310


>gi|84684683|ref|ZP_01012583.1| efflux transporter, RND family, MFP subunit [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667018|gb|EAQ13488.1| efflux transporter, RND family, MFP subunit [Rhodobacterales
           bacterium HTCC2654]
          Length = 367

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 51/192 (26%), Gaps = 22/192 (11%)

Query: 235 HEQKNMLRHINELYDEANLEFANYLKE----ISRDLEQNQRTFADEMSKLTILEKTREQK 290
            E             E NL  A  L E        +   +  F    S +   E   +  
Sbjct: 118 REVALKQAQAQLTEAEQNLNAAEKLSEGGFAAETRVLSARSAFEAAQSGVEQAEAALDDL 177

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +P +G I  + +       Q   P   +V       +   V    +  V  G     
Sbjct: 178 DIRAPFSGLIEDDPA-EIGALLQPGSPCATVV-QLDPLKLVGYVAELDVNRVSMGAPVGA 235

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           R            +  I  I           +            +   ++ ++ +R+G  
Sbjct: 236 RLATGDQ-----VQGRITFIGRAADPVTRTFRV-----------EAQVANPDLAIRHGQT 279

Query: 411 AEVLFTAKNTTL 422
           AE+L  +   T 
Sbjct: 280 AEILIQSAGRTA 291



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 92/281 (32%), Gaps = 25/281 (8%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S    I+ +V   GE     +V  + S  SG +    V  G  + +G  L + +      
Sbjct: 62  SAAQEIDSAVVVRGETEATRSV-TLMSEASGRVIAAPVAKGDAVAEGDVLCSLDP----- 115

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
               ++V++K  +  +   +  L    N  + L +   + E ++L     + +  S V  
Sbjct: 116 --GTREVALKQAQAQLTEAEQNL----NAAEKLSEGGFAAETRVLSARSAFEAAQSGVEQ 169

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ--KDLTMMKNLFEKNAVS 212
              +     ++   + +         +E+  + + ALL        +  +  L     V+
Sbjct: 170 AEAALDDLDIRAPFSGL---------IEDDPAEIGALLQPGSPCATVVQLDPLKLVGYVA 220

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + D+N+    +            + +  +  I    D     F    +  + DL      
Sbjct: 221 ELDVNRV--SMGAPVGARLATGDQVQGRITFIGRAADPVTRTFRVEAQVANPDLAIRHGQ 278

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
            A+ + +          ++ L+      +  +     + A+
Sbjct: 279 TAEILIQSAGRTAHLLPQSALTLNDAGDLGVRVVGEGDVAR 319


>gi|332995076|gb|AEF05131.1| acriflavine resistance protein a [Alteromonas sp. SN2]
          Length = 380

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 58/157 (36%), Gaps = 5/157 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +        ++    G+I +   E G+Q+ +G  L   +D      ++     +K+ 
Sbjct: 56  PGRVTPSRQSQ-VRPQVDGVITERLFEEGAQVEKGQQLYQIDDARYRAQLNSTIADVKSA 114

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           + ++ T    L+    +YD L K      ++  D + +     + +     +     + +
Sbjct: 115 QANLKT----LEAKARRYDDLIKQNAISRQEYDDVIAQKEQAQAAISVAQAAVDLARVNL 170

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             T++ +    R+     +    A  +  Q+  T+ +
Sbjct: 171 GYTKVYAPISGRISRSFVTEGTLATTNQTQQLATITQ 207



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 59/180 (32%), Gaps = 10/180 (5%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           S+ S+    G  ++       LT  R    + + L  + +  R      Q D  + + LF
Sbjct: 21  SSESEQAGAGQQAMPPQSVSVLTIARQAVTHEMILPGRVTPSRQSQVRPQVDGVITERLF 80

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---------LEFAN 257
           E+ A  +      +    +   +L   I + K+   ++  L  +A               
Sbjct: 81  EEGAQVEKGQQLYQIDDARYRAQLNSTIADVKSAQANLKTLEAKARRYDDLIKQNAISRQ 140

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
              ++    EQ Q   +   + + +         + +PI+G I      +    A  +Q 
Sbjct: 141 EYDDVIAQKEQAQAAISVAQAAVDLARVNLGYTKVYAPISGRISR-SFVTEGTLATTNQT 199


>gi|239608810|gb|EEQ85797.1| cell polarity protein [Ajellomyces dermatitidis ER-3]
          Length = 1471

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 72/205 (35%), Gaps = 5/205 (2%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             + ++      + L   +D E+   + L  K   L    E R  +L +   +     ++ 
Sbjct: 904  REAVNASSAKAELLERQLDEERDHREGLERKLLQLRAEHEERTTELENTTRRLRD--AEE 961

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                 +    S +           +R       +L    +++ ++ +     + + N  +
Sbjct: 962  LAETHAREAESHRAAFLAGLDRASSRDAESAAKALSEQRVAALKEQVDRANQMVKTNHQA 1021

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKN---MLRHINELYDEANLEFANYLKEISRDLEQN 269
             N+ +++ R   +    L +   +       LR   +   + N   +N  +E+   LE +
Sbjct: 1022 ANEASEKLRRAEERIAGLEQYQEQASREGLQLRRQLQAALKENQALSNENREVKSQLESH 1081

Query: 270  QRTFADEMSKLTILEKTREQKTILS 294
            QR  +    +   L++   ++ I +
Sbjct: 1082 QRDASALAIQHGALKELLVERGITA 1106



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 64/208 (30%), Gaps = 12/208 (5%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                    K   + L   +  EK A +     ++ + K     E Q  +   +   T   
Sbjct: 793  ALASQAEMKAKAEALMSELQEEKRARELAEELHEAMSKRLSEMESQTNNLELESLRTELH 852

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN------- 204
                             + ++   +++ +L  K   L   L +H  D+  ++        
Sbjct: 853  HLQSAFREEVALRSEAESALKLAQIDKNELTQKVENLNDRLENHGTDVGSLREAVNASSA 912

Query: 205  ---LFEKNAVSQNDLNQ-QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               L E+    + D  +  ER + +   E  E   E +N  R + +  + A         
Sbjct: 913  KAELLERQLDEERDHREGLERKLLQLRAEHEERTTELENTTRRLRDAEELAETHAREAES 972

Query: 261  EISRDLEQ-NQRTFADEMSKLTILEKTR 287
              +  L   ++ +  D  S    L + R
Sbjct: 973  HRAAFLAGLDRASSRDAESAAKALSEQR 1000



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 85/282 (30%), Gaps = 42/282 (14%)

Query: 59   IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
            I+    G +K+  VE G  I   +      D   +     +   ++ L   + +   A +
Sbjct: 1090 IQH---GALKELLVERG--ITADSRRSPLLDSPGSRFGTPEHNRLRELEQQLQSSIKAHE 1144

Query: 119  FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
                 ++  E+  +    + L+ L   + +           + R               +
Sbjct: 1145 ETKISFESREQEADRAYNEKLEQLENDYQSAVHYVKGTEKMLKRMKDELAKYKTQNSKLQ 1204

Query: 179  LDLENKSSLLRALLSSHQKD-----------LTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             DLE       +  S   +              +M +L EK + S  DL  Q        
Sbjct: 1205 ADLETALQKASSRSSPSHEASAQWEAERSNMQHIMSDLQEKTSSSIADLKTQ-------L 1257

Query: 228  LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK-- 285
             +LRE++   +          +    E  N  ++   DLEQ +   A   S+    E+  
Sbjct: 1258 AKLREDLTAAQAERDQSQTEQENIKRELLNITEKSREDLEQLKNENALLESRALDAEQKV 1317

Query: 286  --------------TREQKTILSPIAG---TIVYNQSFSSSN 310
                           R+ + +LS   G   T+    S +   
Sbjct: 1318 TMLLDQVESSVTNYRRQSQQVLSHSNGLSRTVSNASSNTIGG 1359


>gi|298530588|ref|ZP_07017990.1| efflux transporter, RND family, MFP subunit [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509962|gb|EFI33866.1| efflux transporter, RND family, MFP subunit [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 387

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 73/216 (33%), Gaps = 21/216 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ- 268
           A ++ +L +   +   S LE+     ++   L     L  ++ L+ A  + ++ +     
Sbjct: 110 ATAELELARAALVESSSELEVARKDLDRSQRLFERGNL-SQSELDQAQSVFDVRQSRHDV 168

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAG----TIVYNQSFSSSNYAQQSQPLMKIVPH 324
            Q       + L       E  TI +  +G         +     +  Q ++P++ I+  
Sbjct: 169 AQAQVRQRQAALEAARVRLEYTTIRARWSGDDPTRRAARRFVDEGDMLQANEPIVTII-C 227

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           ++       V  +    +  G +A ++   ++D++    +  I ++ P++       +  
Sbjct: 228 TRNLKAVINVIERDYPFISTGQSAVIKPDAFSDLQ---LEGTIIRLAPLLEDATRQAR-- 282

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                     ++   + +  L  G    V       
Sbjct: 283 ---------AEVLVPNPDGRLAPGMFVRVQIELGQR 309



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 49/136 (36%), Gaps = 4/136 (2%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           +G ++ E +   +    SG ++K  V+ G ++ +G  +   +  E    + +    ++  
Sbjct: 59  TGTLVAETSFQ-VAPRVSGRLEKLHVDIGDRVARGDIIAELDSEEFAQEVHMATAELELA 117

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFES---REEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           R  +    S L+      D  ++ FE     + +L      +    S+          R 
Sbjct: 118 RAALVESSSELEVARKDLDRSQRLFERGNLSQSELDQAQSVFDVRQSRHDVAQAQVRQRQ 177

Query: 164 LKMKLTRMRSIYLNRL 179
             ++  R+R  Y    
Sbjct: 178 AALEAARVRLEYTTIR 193


>gi|88703922|ref|ZP_01101637.1| membrane-fusion protein [Congregibacter litoralis KT71]
 gi|88701749|gb|EAQ98853.1| membrane-fusion protein [Congregibacter litoralis KT71]
          Length = 351

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 65/205 (31%), Gaps = 20/205 (9%)

Query: 185 SSLLRALLSSHQKDLTMMKNLF--EKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNML 241
              + A + + +  +   + L   E+  +   D  Q  +++     E L   + +    +
Sbjct: 58  VESIAASVEARETTIIASRLLARVEQITMRAGDYAQAGQLLVTLENEDLEAQVAQTSEAM 117

Query: 242 RHINELYDEANLEFANYLKEISRDL-------------EQNQRTFADEMSKLTILEKTRE 288
           + +     EA       ++   R L                    A     L I + +  
Sbjct: 118 KSVEARLIEARQNRDRAVELHERKLIADADLDAANANAAALTAELAAAKQSLEIAKTSLS 177

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHVKKGYT 347
              I SPIAG IV  +     +     Q ++ +  P S    I A V       +K+G  
Sbjct: 178 FAEIRSPIAGRIVD-RFVEPGDTVSPGQSILSLYNPVS--LRIEAWVRESLALSLKEGQE 234

Query: 348 ATVRFPHYADIREKKFKAIIEKIDP 372
             V  P        + + ++   DP
Sbjct: 235 VAVEIPALNSRLTARIEELVPAADP 259


>gi|296389160|ref|ZP_06878635.1| hypothetical protein PaerPAb_13471 [Pseudomonas aeruginosa PAb1]
          Length = 334

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 92/263 (34%), Gaps = 34/263 (12%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI--HEQKNML 241
           +   L   +   + +L +++     N V++  L +    +  S  +LR+     ++++ L
Sbjct: 69  EKGELLLSIDPARYELAVLRAERAVN-VARAALGESRAAIEASQAQLRQRRSEAQRRSAL 127

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTF-------ADEMSKLTILEKTREQKTILS 294
           +  + L  E N +    +     +L +NQ +            + L       E+  + +
Sbjct: 128 QKRSMLSVEENEKAQTDVSLAQAELLRNQASLGLAQANVELAEAALQQARLDLERTQVRA 187

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P++G +   Q+    +YA    PL+ +V      Y+       ++  ++ G  A V    
Sbjct: 188 PVSGYVTNLQTR-EGDYAHAGVPLLALV-DRDSFYVSGYFEETKLPGIRVGSRARVELMS 245

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQT------QEYYE---------VILKITDLAFS 399
                 ++F   ++ I   I+ ++N   +         Y          V + I      
Sbjct: 246 -----GERFDGRVQSIAHAITDRENAEGSRLLANINPSYTWVKLAQRIPVRIAIDPAYRQ 300

Query: 400 DNNIELRNGFPAEVLFTAKNTTL 422
            N   LR G  A +       T 
Sbjct: 301 RN--TLRAGVTATIRVLPAEDTA 321



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 50/145 (34%), Gaps = 2/145 (1%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV + +  SG+I +  + +   + +G  LL+ +       +   + ++   R  + 
Sbjct: 42  VRADVVTLSADVSGLITRLPLSDNQPVEKGELLLSIDPARYELAVLRAERAVNVARAALG 101

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++A++   ++  + ++  E++    L          ++     +S     L      +
Sbjct: 102 ESRAAIE--ASQAQLRQRRSEAQRRSALQKRSMLSVEENEKAQTDVSLAQAELLRNQASL 159

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQ 196
                N    E      R  L   Q
Sbjct: 160 GLAQANVELAEAALQQARLDLERTQ 184


>gi|295096685|emb|CBK85775.1| RND family efflux transporter, MFP subunit [Enterobacter cloacae
           subsp. cloacae NCTC 9394]
          Length = 354

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 42/116 (36%), Gaps = 4/116 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +    +G  + +G  L   +D E    + L +  +++    +   +  L    +++
Sbjct: 58  GVITRIHFRDGQYVKKGDVLFELDDAEPRAALRLAQAEVRSAEATLRQAQQQL----SRF 113

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           + L          + +   +     + +         RS+ +  TR+ S    R+ 
Sbjct: 114 ESLGSNNAISRHDVDNARMQRDVASAALEQAKARLDTRSVTLNYTRIASPIDGRIG 169



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 80/287 (27%), Gaps = 41/287 (14%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           T    F   I     +++            R++  +   L         +         +
Sbjct: 13  TLPPAFAAAIPVRVATVEQTAHAAERQIPGRIEAIHTVELRARTEGVITRIHFRDGQYVK 72

Query: 208 KNAVSQNDLNQQE--RIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLKEIS 263
           K  V   +L+  E    +  +  E+R      +   + ++  E     N    + +    
Sbjct: 73  KGDV-LFELDDAEPRAALRLAQAEVRSAEATLRQAQQQLSRFESLGSNNAISRHDVDNAR 131

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS-QPLMKIV 322
              +          ++L     T     I SPI G I  + +F   +    +   L+++V
Sbjct: 132 MQRDVASAALEQAKARLDTRSVTLNYTRIASPIDGRI-GHSNFHVGSLVNPASGVLVEVV 190

Query: 323 PHSKLTYIRAKVTPKQIQH--------VKKGYTATVR-----FPHYADIREKKFKAIIEK 369
                     ++ P +I           K G  A +      +    D   ++    +  
Sbjct: 191 ----------QLDPIRIAFALEEGSFATKAGQHADISAMKQAWQALIDSNGQRISGELTS 240

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +D  I  +  ++                F++   +L  G    V   
Sbjct: 241 VDNRIDPRTASVML-----------RAEFANPRHQLLPGGNVNVYLR 276


>gi|288934340|ref|YP_003438399.1| secretion protein HlyD [Klebsiella variicola At-22]
 gi|288889069|gb|ADC57387.1| secretion protein HlyD family protein [Klebsiella variicola At-22]
          Length = 378

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 71/225 (31%), Gaps = 21/225 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   ++ +   L      +R+      D   +    +A      +D    +   +  A+ 
Sbjct: 99  YRARLNKLKADLAAGEATLRAKQATIDDASARVQQAQAEYDRVTRDY---QRYAQGAAMP 155

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            N  ++Q+    +  ++++  + +              A  +  N  +++S         
Sbjct: 156 VNPFSEQDVTHARQQVQIQTAVLQA-------------AKAQLQNAREQVSGRYNGLDAN 202

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
            A   S++   E    Q  + +P  G +    +    +      +P++  +P  K   + 
Sbjct: 203 IASLKSQILEAEYNLAQTVVRAPSDGYVTQLLARPGMTAVRLPFKPVLVFIPQQKRQVV- 261

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
           A      +  +  G +A V F              + ++ P I  
Sbjct: 262 AVFRQNSVLRLTAGDSAEVVFNGLPGSVY---SGKVSRVLPAIPD 303



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 10/139 (7%), Positives = 45/139 (32%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +   +    + +G  L   +D      ++  K  +      +  +++ +D  + +
Sbjct: 71  SGEVVEVTSKTNVLMKKGELLFRIDDTRYRARLNKLKADLAAGEATLRAKQATIDDASAR 130

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               +  ++        +        +      ++   + ++++   +++      +   
Sbjct: 131 VQQAQAEYDRVTRDYQRYAQGAAMPVNPFSEQDVTHARQQVQIQTAVLQAAKAQLQNARE 190

Query: 184 KSSLLRALLSSHQKDLTMM 202
           + S     L ++   L   
Sbjct: 191 QVSGRYNGLDANIASLKSQ 209


>gi|163851822|ref|YP_001639865.1| M50 family peptidase [Methylobacterium extorquens PA1]
 gi|163663427|gb|ABY30794.1| peptidase, M50 family [Methylobacterium extorquens PA1]
          Length = 715

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 50/143 (34%), Gaps = 4/143 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
               R   L+      ++    ++P+  +  + G +   D+   I++   GI+    VE 
Sbjct: 422 RRRSRAVTLTSAATGAVLALLFVVPLPYTTMAQGVVWAPDDTQ-IRTRTDGILTTLLVEP 480

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G     G  L T ED      + + +  +  LR   D  +        +  +L++   S 
Sbjct: 481 GRDAQAGEALATLEDPSLDSRVAVLEAQLAELRLRYDAARLG---DRVQAQILQEQIAST 537

Query: 135 EEQLLDFLGKYHSTCSKVFNYGI 157
           +E L  +  +      +    G 
Sbjct: 538 QEILRVYRERQAGLIVRASQAGR 560


>gi|91774524|ref|YP_544280.1| secretion protein HlyD [Methylobacillus flagellatus KT]
 gi|91708511|gb|ABE48439.1| secretion protein HlyD [Methylobacillus flagellatus KT]
          Length = 356

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 54/164 (32%), Gaps = 5/164 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G ++   V  G  + +G  L   +        D  +   +         ++ +    +  
Sbjct: 57  GRVEDILVNEGDFVEKGQLLARMQIDVLNAQRDEARAQYQQALNSAVAAQAQVALRESDK 116

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +     RE +L     +     S+  +   +S  + L     R+RS        + +
Sbjct: 117 RATQALVAQRESELDAAQRRL--ARSETLSAEGASSIQELDDDRARVRSAQAAVEAAKAQ 174

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            S  +A + + +  +   ++     A ++  + + E  +  S L
Sbjct: 175 VSAAQAAIDAAKAQVIGARSTV---AAAEATIARIEADIADSQL 215



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/296 (9%), Positives = 77/296 (26%), Gaps = 19/296 (6%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E  F  + + L        +               S      ++     ++   +   + 
Sbjct: 66  EGDFVEKGQLLARMQIDVLNAQRDEARAQYQQALNSAVAAQAQVALRESDKRATQALVAQ 125

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             + L + Q+ L   + L  + A S  +L+     V  +   +     +       I+  
Sbjct: 126 RESELDAAQRRLARSETLSAEGASSIQELDDDRARVRSAQAAVEAAKAQVSAAQAAIDAA 185

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
             +                   + T A   + +  +E       + +P  G + Y +   
Sbjct: 186 KAQVIG---------------ARSTVAAAEATIARIEADIADSQLTAPRDGRVQY-RIAQ 229

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                     ++ +V  S   Y+   +       +  G  A +              + +
Sbjct: 230 PGEVLAGGGKVLNLVDLSD-VYMTFFLPQAAAGRLAMGEDARIILDAAPQYVIPATISFV 288

Query: 368 EKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                   +  +  + + +  + V  +I       +   ++ G P          T
Sbjct: 289 ASTAQFTPKTVETESERQKLMFRVKAQIDRGLLHKHLKLVKTGLPGVAWVKVDKQT 344


>gi|116624875|ref|YP_827031.1| RND family efflux transporter MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116228037|gb|ABJ86746.1| efflux transporter, RND family, MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 423

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/308 (12%), Positives = 91/308 (29%), Gaps = 39/308 (12%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E S    L  +   L      +E Q +             F   + S+   +      + 
Sbjct: 57  EASRSVDLAFQVPGLLVNLPVKEGQKVAKGAVIAQPRQDEFQERVKSLQGQVDQARASLS 116

Query: 173 SIYL-----NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           ++ +      RL  E +   + A +++ + +      L + +AVS+ +         +  
Sbjct: 117 ALQVGERPEERLSREAQLRAVGAKVANAKTEFDRYSRLVQSSAVSRAEY--------ELA 168

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                   E++   R + E    A  E  +                    ++L       
Sbjct: 169 ATAYRVAQEEQTAARQLVEKGTGARTEDIDAQA----------AEVRTLEARLAEASLQL 218

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
              T+ +P +G +         +    ++P++ +    ++  + A V        +    
Sbjct: 219 ADSTLRAPYSGVVAQRFVDEKQSIV-ANKPVVTLQNVDEIDIV-ADVP-------EAAMA 269

Query: 348 ATVRFPHYAD--IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
           A +R   +            +   +      Q  +  TQ + +V + +     +   + +
Sbjct: 270 ADIRSTAFTKLVAEFSTAPGVQFPVRIKEVAQVADPATQTF-KVRVAMP----APRRVNV 324

Query: 406 RNGFPAEV 413
             G  A V
Sbjct: 325 LPGMTATV 332


>gi|327543536|gb|EGF29955.1| multidrug resistance efflux pump [Rhodopirellula baltica WH47]
          Length = 374

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/325 (13%), Positives = 93/325 (28%), Gaps = 47/325 (14%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K A+          + +   R +++             +F         ++++    +  
Sbjct: 56  KQAIVIAQIDPITAQLSTNGRVKEVFVSPNVPIQAGDVLFTVDPIPYENAVEVAKAGLEQ 115

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLT-------MMKNLFEKNAVSQNDLNQQERIVYKS 226
              N    E+   L RA L   + DLT         + L E    SQ++L +   +  +S
Sbjct: 116 AKQNVQLSESTVELSRATLERAKADLTYATNDRDRYQKLRESGGASQDELERAVTLFQQS 175

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L +   EQ      I+    +A    A                       L   E  
Sbjct: 176 DAALTQ--AEQSLKQAAISVGVAKAKQTQAETT--------------------LANAEYD 213

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKL----TYIRAKVTPKQIQH 341
            +Q T+ +P  G +   Q          +  P+M  +  +        +   V  K    
Sbjct: 214 LQQTTVKAPADGYVTNLQVH-PGMLLGPATGPVMSFIRDTDERQKGVVVAVFVE-KNFLR 271

Query: 342 VKKGYTATVRFPHYA-DIREKK------FKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           ++    A +    Y  +I   +           + +   +   D        + V +++ 
Sbjct: 272 IRTDQYAELAMDAYPGEILTGRVLNSINVSGKGQLVAGGMVPTDLADGKPTQFAVRIQLD 331

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
           D+    ++  L  G   +      +
Sbjct: 332 DV----DSYPLPGGAQGQAAVYTGD 352



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 63/215 (29%), Gaps = 35/215 (16%)

Query: 23  LSIIGIIGLITWSILLPIEI-----------SVSSSGEILN-----------EDNVVEI- 59
             + GI   I W +   +++           +    G I+                + I 
Sbjct: 3   WILGGIYCGIIWLVFAKLKLMRLSLPLAIILASVGPGLIVVLLFCAQYFHPYTKQAIVIA 62

Query: 60  -------KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID- 111
                  +   +G +K+  V     I  G  L T + I   + +++ K  ++  + ++  
Sbjct: 63  QIDPITAQLSTNGRVKEVFVSPNVPIQAGDVLFTVDPIPYENAVEVAKAGLEQAKQNVQL 122

Query: 112 ----TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
                E S       K D+     +    Q L   G       +           +L   
Sbjct: 123 SESTVELSRATLERAKADLTYATNDRDRYQKLRESGGASQDELERAVTLFQQSDAALTQA 182

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
              ++   ++    + K +     L++ + DL   
Sbjct: 183 EQSLKQAAISVGVAKAKQTQAETTLANAEYDLQQT 217


>gi|323967314|gb|EGB62737.1| efflux transporter [Escherichia coli M863]
 gi|327253666|gb|EGE65295.1| macrolide-specific efflux protein macA [Escherichia coli STEC_7v]
          Length = 371

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G      F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKTW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|319779590|ref|YP_004130503.1| putative RND transporter, membrane fusion protein [Taylorella
           equigenitalis MCE9]
 gi|317109614|gb|ADU92360.1| putative RND transporter, membrane fusion protein [Taylorella
           equigenitalis MCE9]
          Length = 362

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 48/138 (34%), Gaps = 5/138 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G  +  + V  ++   SG + K   ++G  +  G PL   +       ++  K     
Sbjct: 48  AIGNAVPSEKV-IVRPQISGPVTKKFFKDGDFVNAGDPLFEIDSSTYKAELNQIKAQSLV 106

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L   + T +  L     +Y +L K      +Q+       +   +++           + 
Sbjct: 107 LESKLITAQKDLK----RYQILFKQDSIARQQVEKQQALVNQLDAELKGIKAQVAQAQIN 162

Query: 166 MKLTRMRSIYLNRLDLEN 183
           +  T +++    RL +  
Sbjct: 163 LDYTTVKAPIDGRLGISQ 180



 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 59/171 (34%), Gaps = 47/171 (27%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                ++ +S +L + L + QKDL   + LF+++++++  + +Q+ +V +   EL+    
Sbjct: 95  AELNQIKAQSLVLESKLITAQKDLKRYQILFKQDSIARQQVEKQQALVNQLDAELKG--- 151

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
                                                     +++   +   +  T+ +P
Sbjct: 152 ----------------------------------------IKAQVAQAQINLDYTTVKAP 171

Query: 296 IAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           I G  +        N A  +    L+ I+ ++    +   +  K I  V  
Sbjct: 172 IDGR-LGISQIDVGNIATTNSEGGLVSII-NTNPMEVEFSIPDKYISKVAP 220


>gi|316933748|ref|YP_004108730.1| RND family efflux transporter MFP subunit [Rhodopseudomonas
           palustris DX-1]
 gi|315601462|gb|ADU43997.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
           palustris DX-1]
          Length = 399

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 47/125 (37%), Gaps = 5/125 (4%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            VEI+S  +G +++ Q   G+ + +G  L+  +       +D  +  +   R  +   K+
Sbjct: 74  RVEIRSRVAGAVQEIQFREGALVNKGDLLVRIDPSLYAAEVDRAQAQLSAARARVVFTKA 133

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            ++                + ++ + L  Y    + + +   +     L +  T +R+  
Sbjct: 134 DVERSQQL-----STSSITQREVDNRLNAYREAEANLRSAEAALKTAELNLSYTEIRAPV 188

Query: 176 LNRLD 180
             R+ 
Sbjct: 189 AGRVG 193



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 20/182 (10%), Positives = 51/182 (28%), Gaps = 3/182 (1%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             L++  G   +  +     G+      ++ K T     +  RL+   +  +   +  + 
Sbjct: 26  AALMERTGAAQAETTAAAPAGVPVSVALVEAKATTPSDAFSGRLEAIERVEIRSRVAGAV 85

Query: 196 QKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           Q+       L  K   + + D +     V ++  +L             +      +   
Sbjct: 86  QEIQFREGALVNKGDLLVRIDPSLYAAEVDRAQAQLSAARARVVFTKADVERSQQLSTSS 145

Query: 255 FANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                 +       + +       + L   E       I +P+AG +   +  +  N   
Sbjct: 146 ITQREVDNRLNAYREAEANLRSAEAALKTAELNLSYTEIRAPVAGRVGKVEI-TVGNLIA 204

Query: 314 QS 315
             
Sbjct: 205 AG 206


>gi|254473757|ref|ZP_05087152.1| putative Membrane Fusion Protein Family member [Pseudovibrio sp.
           JE062]
 gi|211957143|gb|EEA92348.1| putative Membrane Fusion Protein Family member [Pseudovibrio sp.
           JE062]
          Length = 404

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 62/221 (28%), Gaps = 17/221 (7%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           WK +          + L   + +          P   +     + +       + +   G
Sbjct: 20  WKGIPVTLYNVHYALVLWVFMALAVFFAVFYYYPKSFTGIVPFKTVP------VVAENGG 73

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + +  V  G ++  G PL + E       +D     I  ++  I      ++  +   D
Sbjct: 74  TVTEVFVTGGDRVKVGDPLFSTESAMEQAKVDHANRKIDEIKSAIKAAHLEVETADAALD 133

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY--------LN 177
             +      E  L D         +      +          +  +++            
Sbjct: 134 AAKTGLNQAEMTLADHEELKMKNSAAFQRARLERAISQRDTSVADVKAAKAKLEAAKVQA 193

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNAVSQNDL 216
              L ++ +  +A L   + +L   +  +L +   V Q  L
Sbjct: 194 YSTLPSQLASAKATLEQAEIELKKTRVYSLVD-GVVEQVTL 233


>gi|156766068|ref|NP_059995.2| serine/threonine-protein kinase MRCK gamma [Homo sapiens]
 gi|290457650|sp|Q6DT37|MRCKG_HUMAN RecName: Full=Serine/threonine-protein kinase MRCK gamma; AltName:
           Full=CDC42-binding protein kinase gamma; AltName:
           Full=DMPK-like gamma; AltName: Full=Myotonic dystrophy
           kinase-related CDC42-binding kinase gamma; Short=MRCK
           gamma; Short=Myotonic dystrophy protein kinase-like
           gamma; AltName: Full=Myotonic dystrophy protein
           kinase-like alpha
          Length = 1551

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/211 (10%), Positives = 64/211 (30%), Gaps = 22/211 (10%)

Query: 94  DLIDLKKVSIKNLRCHI-DTEKSALDFLNNK-YDVLEKAFESREEQLLDFLGKYHSTCSK 151
             ++  +  ++ LR  + +  +                  +S   Q LD L +  +    
Sbjct: 444 RELEQLRKEVQTLRDRLPEMLRDKASLSQTDGPPAGSPGQDSDLRQELDRLHRELAEGRA 503

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                   + R+   +   ++ +   +      +S  RAL S  ++     + L  + + 
Sbjct: 504 GLQAQEQELCRAQGQQEELLQRLQEAQEREAATASQTRALSSQLEEARAAQRELEAQVSS 563

Query: 212 SQNDLNQQERIVYKSTLELRE--------------------NIHEQKNMLRHINELYDEA 251
               + Q +    +   E  +                       + +  +  + E  ++A
Sbjct: 564 LSRQVTQLQGQWEQRLEESSQAKTIHTASETNGMGPPEGGPQEAQLRKEVAALREQLEQA 623

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           +    +  +E    L++  R  + E  +L  
Sbjct: 624 HSHRPSGKEEALCQLQEENRRLSREQERLEA 654


>gi|74214119|dbj|BAE40321.1| unnamed protein product [Mus musculus]
          Length = 744

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/205 (9%), Positives = 65/205 (31%), Gaps = 2/205 (0%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           ++ +    ++  +         +  E+S  +    +   L    +S    L     +   
Sbjct: 426 DNTQLQTRVETLECERGKQEAQLLAERSRFEDEKQQLASLIADLQSSVSNLSQAKEEL-E 484

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL-LSSHQKDLTMMKNLF 206
             S+     +++   S+      ++        L+ ++   +A  L + Q+     + L 
Sbjct: 485 QASQAQGAQLTAQLTSMTGLNATLQQRDQELASLKEQAKKEQAQMLQTMQEQEQAAQGLR 544

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           ++     + L  +E+ + ++  E      +    L  + E  + +  E     +++    
Sbjct: 545 QQVEQLSSSLKLKEQQLEEAAKEQEATRQDHAQQLAIVAEAREASLRERDTARQQLETVE 604

Query: 267 EQNQRTFADEMSKLTILEKTREQKT 291
           ++          +L      R+   
Sbjct: 605 KEKDAKLESLQQQLQAANDARDNAQ 629



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 68/191 (35%), Gaps = 3/191 (1%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV---FNYGI 157
           + +  L+       +    L  + + LE     +E QLL    ++     ++        
Sbjct: 411 LQLDTLKQEAAKLATDNTQLQTRVETLECERGKQEAQLLAERSRFEDEKQQLASLIADLQ 470

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           SSV    + K    ++       L  + + +  L ++ Q+    + +L E+    Q  + 
Sbjct: 471 SSVSNLSQAKEELEQASQAQGAQLTAQLTSMTGLNATLQQRDQELASLKEQAKKEQAQML 530

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q  +   ++   LR+ + +  + L+   +  +EA  E     ++ ++ L          +
Sbjct: 531 QTMQEQEQAAQGLRQQVEQLSSSLKLKEQQLEEAAKEQEATRQDHAQQLAIVAEAREASL 590

Query: 278 SKLTILEKTRE 288
            +     +  E
Sbjct: 591 RERDTARQQLE 601


>gi|333006681|gb|EGK26180.1| macrolide-specific efflux protein macA [Shigella flexneri VA-6]
          Length = 371

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+ G +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMGGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKPGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++   L D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSLQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|325105859|ref|YP_004275513.1| efflux transporter, RND family, MFP subunit [Pedobacter saltans DSM
           12145]
 gi|324974707|gb|ADY53691.1| efflux transporter, RND family, MFP subunit [Pedobacter saltans DSM
           12145]
          Length = 370

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 62/205 (30%), Gaps = 17/205 (8%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
              K+ L++ E   ++            E +      L     DL   +       + LT
Sbjct: 104 DQAKANLKIAEANLDKVKRDVQRYRKLAEQDAIAKQTLDYAETDLNNQEAQVLAAKANLT 163

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ- 340
                  +  I +P +GTI       +         L+  +          +V  + I  
Sbjct: 164 TAATNLNRSVIRAPFSGTI-GISQVRNGALVSAGTTLLNTISTVNPITAEFQVPERNIAH 222

Query: 341 HV---KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            V   K G  + ++               I  ID  + +  N +      +V  K     
Sbjct: 223 FVSLQKSGNQSALKLRLSDGQLF-DGAGQIITIDRAVDEGTNTI------KVRAK----- 270

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTL 422
           F++   +LR G  A +    K++T 
Sbjct: 271 FNNPGNQLRAGMNATITVIEKSSTP 295



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 84/218 (38%), Gaps = 11/218 (5%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           ++   N  E+++  SG I    V +G+ + +G  L   +       +D  K ++K    +
Sbjct: 57  VIVPINETELRAEVSGYITNIFVTDGASVAKGDRLYEIDGTRYAAAVDQAKANLKIAEAN 116

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +D  K  +     +Y  L +     ++ L       ++  ++V     +    +  +  +
Sbjct: 117 LDKVKRDV----QRYRKLAEQDAIAKQTLDYAETDLNNQEAQVLAAKANLTTAATNLNRS 172

Query: 170 RMRSIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ---QERIVYK 225
            +R+ +   + + + ++  L +  ++    ++ +  +  +  V + ++      ++   +
Sbjct: 173 VIRAPFSGTIGISQVRNGALVSAGTTLLNTISTVNPITAEFQVPERNIAHFVSLQKSGNQ 232

Query: 226 STLELRENIHEQ---KNMLRHINELYDEANLEFANYLK 260
           S L+LR +  +       +  I+   DE         K
Sbjct: 233 SALKLRLSDGQLFDGAGQIITIDRAVDEGTNTIKVRAK 270


>gi|260902095|ref|ZP_05910490.1| AcrA/AcrE family protein [Vibrio parahaemolyticus AQ4037]
 gi|308109940|gb|EFO47480.1| AcrA/AcrE family protein [Vibrio parahaemolyticus AQ4037]
          Length = 351

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 45/113 (39%), Gaps = 4/113 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G ++ E +  +I +  +  + +  V+ G ++ QG  L   E  +    +   + ++ + 
Sbjct: 64  PGVVVAEQHA-DIAARLTASVMEVLVKVGDRVKQGDVLARLESDDLDARVRQSEQALSSA 122

Query: 107 RCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  ++    E S +  L NK  + +  F+  E  L      ++   + V    
Sbjct: 123 QAQLNAARKEFSRVRALLNKKLIPQSQFDQAESALQTAQANFNKAQAAVSEAE 175



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 15/231 (6%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQ 237
           E  + +   L +S  + L  + +  ++  V      +DL+ + R   ++    +  ++  
Sbjct: 70  EQHADIAARLTASVMEVLVKVGDRVKQGDVLARLESDDLDARVRQSEQALSSAQAQLNAA 129

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +     +  L ++  +  + +  +    L+  Q  F    + ++  E T     I +P  
Sbjct: 130 RKEFSRVRALLNKKLIPQSQF-DQAESALQTAQANFNKAQAAVSEAETTFGYSIITAPFD 188

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I         + A     L+ +  +     I        + +V       V FP Y  
Sbjct: 189 GLITQKPIN-KGDTATPGALLLSMY-NPNSLEIEVNFAESVMPYVTYDKEVDVVFPSYNL 246

Query: 358 IREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSD 400
             +   K +    D         +  +    +    Y +V L +TD     
Sbjct: 247 NAQAAVKEVTPSADANSRSYTVKLQFEPPTAIYPGTYAKVALTLTDDVILR 297


>gi|198276618|ref|ZP_03209149.1| hypothetical protein BACPLE_02814 [Bacteroides plebeius DSM 17135]
 gi|198270143|gb|EDY94413.1| hypothetical protein BACPLE_02814 [Bacteroides plebeius DSM 17135]
          Length = 407

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 65/216 (30%), Gaps = 23/216 (10%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +DL   +     +  E      + +  L   N+   E  L      ++   D E+ + T+
Sbjct: 98  SDLQSAQATYNGAKAEY-----DYQKKLYTRNKALHEKQLISETDYEQSVYDYERAKSTY 152

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS---QPLMKIVPHSKLTYI 330
               + L   E+     TI SPI G +                    L  I        +
Sbjct: 153 EQTQAALAKAERNLSYATITSPINGIVTSKDV-EEGQTVASGFETPTLFTIAADLTKMQV 211

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI------DPIISQQDNNLQTQ 384
            A V    I  +K     T     Y D     F+  + +I          S    + +T 
Sbjct: 212 VADVDEADIAGIKDSARVTFTVDAYPDD---VFEGKVYQIRLGSVNSSSSSSTSTSSETV 268

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             YEV++        + +++L+    A V       
Sbjct: 269 VTYEVVITAD-----NPDLKLKPRLTANVTIYTDTR 299



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 51/137 (37%), Gaps = 4/137 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             I  S++++G I     V E+ +  SGII K  ++  S + QG  +   + +     + 
Sbjct: 43  GNISNSITATGTIEPVTEV-EVGTQVSGIIDKIYIDYNSVVKQGEVIAEMDKVTLLSDLQ 101

Query: 98  LKKVSIKNLRCHIDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             + +    +   D +K   +    L+ K  + E  +E            Y  T + +  
Sbjct: 102 SAQATYNGAKAEYDYQKKLYTRNKALHEKQLISETDYEQSVYDYERAKSTYEQTQAALAK 161

Query: 155 YGISSVYRSLKMKLTRM 171
              +  Y ++   +  +
Sbjct: 162 AERNLSYATITSPINGI 178


>gi|86358217|ref|YP_470109.1| hypothetical protein RHE_CH02610 [Rhizobium etli CFN 42]
 gi|86282319|gb|ABC91382.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 450

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 70/202 (34%), Gaps = 28/202 (13%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +++L+  E +  +  M     E+   A     N   +  +DLE+ +        ++  L
Sbjct: 249 ARTSLDRAERLAGRDAMSADALEVTRTAFDTAGNAAAQARQDLEKAKLDIDRAREQMEAL 308

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNY------AQQSQPLMKIVPHSKLTYIRAKVTPK 337
                  T+ +P++GT+    +             ++++ L+ I   +    I A V   
Sbjct: 309 -------TVRAPVSGTVTRLDARVGDTVLSREDSVRENESLLAIT-DTASLVIDADVAEA 360

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  ++ G         + D   K F   + KI P+IS++           V L+++  +
Sbjct: 361 NMALLRPGLKGEAVLDGFPD---KPFAVEVAKIAPVISKEKGT--------VTLRLSPSS 409

Query: 398 FSDNNIELRNGFPAEVLFTAKN 419
                   R    A +      
Sbjct: 410 PPPGT---RPAMAARIQLVVGE 428



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 50/160 (31%), Gaps = 13/160 (8%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           ++ SG ++  D           I+   +VE G ++  G  LL  +D      +    ++ 
Sbjct: 174 ITGSGYVVAPDIATVFSKYEGRIVA-VEVEVGDRVAAGQVLLRLDDAGARFALRGAYIAG 232

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +     ++    AL       D  E+            L    +  +       ++   +
Sbjct: 233 RAAELVLEARNIALVQARTSLDRAER------------LAGRDAMSADALEVTRTAFDTA 280

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                   + +   +LD++     + AL        T+ +
Sbjct: 281 GNAAAQARQDLEKAKLDIDRAREQMEALTVRAPVSGTVTR 320


>gi|34539962|ref|NP_904441.1| HlyD family secretion protein [Porphyromonas gingivalis W83]
 gi|5081697|gb|AAD39494.1|AF145798_1 immunoreactive 36 kDa antigen PG14 [Porphyromonas gingivalis]
 gi|34396273|gb|AAQ65340.1| HlyD family secretion protein [Porphyromonas gingivalis W83]
          Length = 331

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 79/215 (36%), Gaps = 17/215 (7%)

Query: 5   MWKNLKRNH--PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           M  N +RN   PA L  + +++++ I+G      L P E  +   G+I   +    + S 
Sbjct: 1   MTDNKQRNIVFPAFLLLLGVIAVVTIVGFFM---LRPAEEII--QGQIEVTEYR--VSSK 53

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFE--DIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
             G IK+ +V  G Q+  G  L   E  D+           +    +     + +  + +
Sbjct: 54  VPGRIKELRVSEGQQVQAGDTLAVIEAPDVAAKMEQAKAAEAAAQAQNAKALKGARSEQI 113

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
              Y++ +KA     +  +    K H     +++ G+    + L     +  +    +  
Sbjct: 114 QAAYEMWQKA-----QAGVAIATKTHQRVQNLYDQGVVPAQK-LDEATAQRDAAIATQKA 167

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            E + ++ R       K          + AV++ +
Sbjct: 168 AEAQYNMARNGAEREDKLAASALVDRARGAVAEVE 202



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 69/237 (29%), Gaps = 25/237 (10%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +   + I   ++ +   R          +   ++   ++        +  D   K     
Sbjct: 32  LRPAEEIIQGQIEVTEYRVSSKVPGRIKELRVSEGQQVQAGDTLAVIEAPDVAAKMEQAK 91

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +        +       +  ++++ Y             +A ++   K    ++NL+++ 
Sbjct: 92  AAEAAAQAQNAKALKGARSEQIQAAY-------EMWQKAQAGVAIATKTHQRVQNLYDQG 144

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V    L++       +T +    I  QK      N   + A  E     K  +  L   
Sbjct: 145 VVPAQKLDE-------ATAQRDAAIATQKAAEAQYNMARNGAERED----KLAASALVDR 193

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            R    E+      E    +  +++P AG +       +        P+M I     
Sbjct: 194 ARGAVAEV------ESYINETYLIAPRAGEVSEI-FPKAGELVGTGAPIMNIAEMGD 243


>gi|88799241|ref|ZP_01114820.1| multidrug resistance protein A [Reinekea sp. MED297]
 gi|88778000|gb|EAR09196.1| multidrug resistance protein A [Reinekea sp. MED297]
          Length = 328

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/403 (13%), Positives = 108/403 (26%), Gaps = 92/403 (22%)

Query: 15  ASLKRMTLLSIIGIIGLITWSIL------LPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
            +   +T + +  +IG I +          PI  +   + +I     +        G + 
Sbjct: 3   RTTSIITAIYVAVLIGFIGYGYRLQNHTPAPIIQATVEAPQIRVSAKI-------PGRVD 55

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V  G  +  G  + T +  E     D                  AL  +  K  + +
Sbjct: 56  RIAVREGDSVQPGDVMFTLDSPELKAKRD-----------------QALALIAAKTAMKD 98

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A      + L                                          +++    
Sbjct: 99  RAIRGARNEELAM---------------------------------------AKDQMLQA 119

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           R       K L+ + NL+    + +  L++ +     +   L     E       + E  
Sbjct: 120 RTSAELADKSLSRLTNLYNDGLIPEQQLDEAQAKADAAHFAL-----EAARQRYQMAENG 174

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E  L     +     DL+  Q   A+  + L           I S  AG +        
Sbjct: 175 TEDEL-----ISAAESDLKAAQGALAEVDAALAE-------TEITSNRAGEVTSVLIH-E 221

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
              +    P++ +V   +  Y+R  V+  Q+    KG     RF  Y      +    ++
Sbjct: 222 GEISPAGFPVVTLVNLDEA-YLRFHVSEDQLTRFNKGQ----RFRAYLPGLNAEADFTVD 276

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
            +  +    +        Y++                R G  A
Sbjct: 277 FVSALGDYANWQATRPGEYDLKTFEVHARPDAPLANWRAGMSA 319


>gi|330876553|gb|EGH10702.1| HlyD family secretion protein [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330964381|gb|EGH64641.1| HlyD family secretion protein [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 294

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 68/216 (31%), Gaps = 19/216 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q+      R    +  E +E   + +   +         NL     L+E      +  
Sbjct: 78  IDQDRFRLALRQAQATVAERQETWEQARRENKR---NRGLGNLVAREQLEESQSREARAL 134

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +    +   +   ++  I SP+ G  + +++     +    +P++ +V  S   +I
Sbjct: 135 SALGESRVAVDAAQLNLDRSVIRSPVDGY-LNDRAPRDHEFVTAGRPVLSVV-DSASFHI 192

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQDN 379
                  ++  +  G    +R             +I+  I+           P ++   +
Sbjct: 193 DGYFEETKLDGIHVGQGVDIRVIGDNARLTGHVVSIVAGIEDRDRSSGSNLLPNVNPAFS 252

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            ++  +   V +   ++     N  +  G  A V  
Sbjct: 253 WVRLAQRIPVRIAFDEV---PGNFRMIAGRTATVSI 285



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++V+I    SG+I+K +V +   + +G  L T +       +   + ++   +   +  +
Sbjct: 46  DIVQIAPDVSGLIQKVEVTDNQPVHKGQVLFTIDQDRFRLALRQAQATVAERQETWEQAR 105

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                     +++ +      EQL +   +     S +    ++     L +  + +RS
Sbjct: 106 RENKRNRGLGNLVAR------EQLEESQSREARALSALGESRVAVDAAQLNLDRSVIRS 158


>gi|238753345|ref|ZP_04614708.1| hypothetical protein yruck0001_18700 [Yersinia ruckeri ATCC 29473]
 gi|238708298|gb|EEQ00653.1| hypothetical protein yruck0001_18700 [Yersinia ruckeri ATCC 29473]
          Length = 328

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 97/298 (32%), Gaps = 36/298 (12%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              DV E       +QL        +   K     + S    L +     R        +
Sbjct: 56  ASLDVDEGDKIQPGQQLGQLDQGPFNNALKQAQANVESAQAQLALLQAGYRD--EEIAQV 113

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +++ +  +A  +     L   + L+   A S NDL+                  + +   
Sbjct: 114 KSEVAQKQAAFNYADSFLKRQQGLWSSKATSANDLD------------------DARTSR 155

Query: 242 RHINELYDEANLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                    A  + A +L     +++ Q     A   ++L   +      +++SP +GTI
Sbjct: 156 NQAQAALQAAKDKLAQFLSGNRPQEIAQAAANVAQAEAELAQAQLNLHDTSLISPSSGTI 215

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
           +  ++            +  +   +   ++RA V  + +     G    V   +      
Sbjct: 216 LT-RAVEPGTILSAGNTVFTLS-LTNPVWVRAYVDERHLGQAVPGTEVDV---YTDSRPG 270

Query: 361 KKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           K ++  I  + P       + +  +L+T   Y + + +TD      + ELR G P  +
Sbjct: 271 KPYRGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIIVTDA-----DSELRQGMPVTI 323


>gi|153836867|ref|ZP_01989534.1| putative AcrA/AcrE family protein [Vibrio parahaemolyticus AQ3810]
 gi|149749825|gb|EDM60570.1| putative AcrA/AcrE family protein [Vibrio parahaemolyticus AQ3810]
          Length = 351

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 45/113 (39%), Gaps = 4/113 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G ++ E +  +I +  +  + +  V+ G ++ QG  L   E  +    +   + ++ + 
Sbjct: 64  PGVVVAEQHA-DIAARLTASVMEVLVKVGDRVKQGDVLARLESDDLDARVRQSEQALSSA 122

Query: 107 RCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  ++    E S +  L NK  + +  F+  E  L      ++   + V    
Sbjct: 123 QAQLNAARKEFSRVRALLNKKLIPQSQFDQAESALQTAQANFNKAQAAVSEAE 175



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 75/226 (33%), Gaps = 15/226 (6%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQ 237
           E  + +   L +S  + L  + +  ++  V      +DL+ + R   ++    +  ++  
Sbjct: 70  EQHADIAARLTASVMEVLVKVGDRVKQGDVLARLESDDLDARVRQSEQALSSAQAQLNAA 129

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +     +  L ++  +  + +  +    L+  Q  F    + ++  E T     I +P  
Sbjct: 130 RKEFSRVRALLNKKLIPQSQF-DQAESALQTAQANFNKAQAAVSEAETTFGYSIITAPFD 188

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I         + A     L+ +  +     I        + +V       V FP Y  
Sbjct: 189 GLITQKPIN-KGDTATPGALLLSMY-NPNSLEIEVNFAESVMPYVTYDKEVDVVFPSYNL 246

Query: 358 IREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITD 395
             +   K +    D         +  +    +    Y +V L +TD
Sbjct: 247 NAQAAVKEVTPSADANSRSYTVKLQFEPPTAIYPGTYAKVALTLTD 292


>gi|148701308|gb|EDL33255.1| mCG130273 [Mus musculus]
          Length = 538

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 77/215 (35%), Gaps = 5/215 (2%)

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           QG  L   E    +     +++ +++ R    + +   +    +    E     R+  +L
Sbjct: 12  QGQ-LQHLEGQLGSLQGRAQELLLQSQRAQEHSSRLQAEKSMMEMQGQEL---HRKLGVL 67

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           +   +      +       ++ R  +  +   R        L  +   L+A + + +   
Sbjct: 68  EEEVRAARRAQEETRGQQQALLRDHEALVQLQRRQETELEGLLVRHRDLKANMRALELAH 127

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             ++   E+    + ++  QE  +      L ++ H Q+ +   +  L +E        L
Sbjct: 128 RELQGRHEQLQAQRANVEAQEVALLAERERLMQDGHRQRGLEEELRRLQNEHE-RAQMLL 186

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E+SR+  + Q    +  S+L  LE  R Q  I S
Sbjct: 187 AEVSRERGELQGERGELRSRLARLELERAQLEIQS 221



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 28/278 (10%), Positives = 85/278 (30%), Gaps = 51/278 (18%)

Query: 58  EIKSPFS------GIIKKFQVEN------GSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           +++          G  ++  +++       S++     ++  +  E    + + +  ++ 
Sbjct: 14  QLQHLEGQLGSLQGRAQELLLQSQRAQEHSSRLQAEKSMMEMQGQELHRKLGVLEEEVRA 73

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            R   +  +     L   ++ L +    +E +L   L ++           + ++  + +
Sbjct: 74  ARRAQEETRGQQQALLRDHEALVQLQRRQETELEGLLVRHRD-----LKANMRALELAHR 128

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE---RI 222
               R   +   R ++E +   L A      +D    + L E+    QN+  + +     
Sbjct: 129 ELQGRHEQLQAQRANVEAQEVALLAERERLMQDGHRQRGLEEELRRLQNEHERAQMLLAE 188

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK---------------------- 260
           V +   EL+    E ++ L  +     +  ++     +                      
Sbjct: 189 VSRERGELQGERGELRSRLARLELERAQLEIQSQQLRESNQQLDLSACRLTTQCELLTQL 248

Query: 261 ------EISRDLEQNQ---RTFADEMSKLTILEKTREQ 289
                 E  + L + Q   R   + + +         +
Sbjct: 249 RSAQEEENRQLLAEVQALSRENRELLERSLESRDHLHR 286



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 51/161 (31%), Gaps = 20/161 (12%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
              ++ ++V++   R  +  +      L  +   L+   E  +  L +   +      + 
Sbjct: 141 RANVEAQEVALLAERERLMQDGHRQRGLEEELRRLQNEHERAQMLLAEVSRERGELQGER 200

Query: 152 -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLE------------------NKSSLLRALL 192
                 ++ +         + + +  +   L+                   +    R LL
Sbjct: 201 GELRSRLARLELERAQLEIQSQQLRESNQQLDLSACRLTTQCELLTQLRSAQEEENRQLL 260

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +  Q      + L E++  S++ L++++R        LR  
Sbjct: 261 AEVQALSRENRELLERSLESRDHLHREQREYLDQLNALRRE 301


>gi|28900798|ref|NP_800453.1| putative AcrA/AcrE family protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260365701|ref|ZP_05778215.1| AcrA/AcrE family protein [Vibrio parahaemolyticus K5030]
 gi|260879115|ref|ZP_05891470.1| AcrA/AcrE family protein [Vibrio parahaemolyticus AN-5034]
 gi|260896113|ref|ZP_05904609.1| AcrA/AcrE family protein [Vibrio parahaemolyticus Peru-466]
 gi|28809244|dbj|BAC62286.1| putative AcrA/AcrE family protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308088106|gb|EFO37801.1| AcrA/AcrE family protein [Vibrio parahaemolyticus Peru-466]
 gi|308090253|gb|EFO39948.1| AcrA/AcrE family protein [Vibrio parahaemolyticus AN-5034]
 gi|308111769|gb|EFO49309.1| AcrA/AcrE family protein [Vibrio parahaemolyticus K5030]
          Length = 351

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 45/113 (39%), Gaps = 4/113 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G ++ E +  +I +  +  + +  V+ G ++ QG  L   E  +    +   + ++ + 
Sbjct: 64  PGVVVAEQHA-DIAARLTASVMEVLVKVGDRVKQGDVLARLESDDLDARVRQSEQALSSA 122

Query: 107 RCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  ++    E S +  L NK  + +  F+  E  L      ++   + V    
Sbjct: 123 QAQLNAARKEFSRVRALLNKKLIPQSQFDQAESALQTAQANFNKAQAAVSEAE 175



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 15/231 (6%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQ 237
           E  + +   L +S  + L  + +  ++  V      +DL+ + R   ++    +  ++  
Sbjct: 70  EQHADIAARLTASVMEVLVKVGDRVKQGDVLARLESDDLDARVRQSEQALSSAQAQLNAA 129

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +     +  L ++  +  + +  +    L+  Q  F    + ++  E T     I +P  
Sbjct: 130 RKEFSRVRALLNKKLIPQSQF-DQAESALQTAQANFNKAQAAVSEAETTFGYSIITAPFD 188

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I         + A     L+ +  +     I        + +V       V FP Y  
Sbjct: 189 GLITQKPIN-KGDTATPGALLLSMY-NPNSLEIEVNFAESVMPYVTYDKEVDVVFPSYNL 246

Query: 358 IREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITDLAFSD 400
             +   K +    D         +  +    +    Y +V L +TD     
Sbjct: 247 NAQAAVKEVTPSADANSRSYTVKLQFEPPTAIYPGTYAKVALTLTDDVILR 297


>gi|299753399|ref|XP_001833251.2| kinesin heavy chain [Coprinopsis cinerea okayama7#130]
 gi|298410283|gb|EAU88524.2| kinesin heavy chain [Coprinopsis cinerea okayama7#130]
          Length = 955

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 90/255 (35%), Gaps = 25/255 (9%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE-----SREEQLLDFLGKYHS 147
              ++L+   I+NL   IDT KS  + L   + V     E     +   Q L+   K  +
Sbjct: 713 KQQLELRNNEIRNLNASIDTLKSVNEELKRAFAVTSAGIEGGKNLAESAQDLERTRKAIN 772

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                F+    S+ R L+ +  ++  + +   +++ + + +    +S  +   M    F 
Sbjct: 773 IQLAEFDGVKKSLMRDLQNRCEKVVELEIQLDEIKEQYNNVIRNSNSKAQQKKMA---FL 829

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQK-----NMLRHINELYDEANLEFANYLKEI 262
           +  + Q  L Q++ +   S L+    I E+K       ++++  L  +A+   +   ++ 
Sbjct: 830 ERNLEQLTLVQKQLVDQNSALKKEAGIAERKLLARNERIQNLEALLQDADRRLSVQNQKF 889

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              L+  +       +             I  P+ G                  P+   V
Sbjct: 890 EAQLQAVKERLDQARASKAATASPLNFGRIAKPLRGG---------GGSVPAGSPIATAV 940

Query: 323 PHSKLTYIRAKVTPK 337
           P +      A++  +
Sbjct: 941 PSANPL---ARLQNE 952



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 72/218 (33%), Gaps = 12/218 (5%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L+  + I++ + +  +   + ++R  +   ++ L    +K    ++  +    +  + 
Sbjct: 597 QILIKLDTIDSAEPLTSE--DLTSIRRQLSEGQALLKETVDKLRQSQEENDLLVRRKDEL 654

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             +  S  ++       ++            ++   +  LE + +  R    +   DL  
Sbjct: 655 ENRITSLEAEYEELLEKTIQDEETSNADTAEAVADLKAKLEAQYNAKREAQQNEVNDLKQ 714

Query: 202 MKNLFEKN----------AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
              L                S N+  ++   V  + +E  +N+ E    L    +  +  
Sbjct: 715 QLELRNNEIRNLNASIDTLKSVNEELKRAFAVTSAGIEGGKNLAESAQDLERTRKAINIQ 774

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             EF    K + RDL+       +   +L  +++    
Sbjct: 775 LAEFDGVKKSLMRDLQNRCEKVVELEIQLDEIKEQYNN 812



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 73/194 (37%), Gaps = 10/194 (5%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVY 161
                 +  E    D L  K   L  A E   ++L + L       + V   N  +SS  
Sbjct: 453 DEREEFLRRENELSDALAEKESALAAA-EKLVKELKEELAFLKDQEAAVNKENQAMSSQL 511

Query: 162 RSLKMKLTRM----RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
             L++++ R+    +   +    L+ ++  ++  L   +K LT +K   + ++    +  
Sbjct: 512 NELRLQVERLGYDNKEGIITIDILKEQNQDIKNELEEVRKQLTDLKANQKDSSAEDKEKR 571

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +QE++             ++ + LR I    +  D A    +  L  I R L + Q    
Sbjct: 572 KQEKMALMMAKFDSGAFSDKDDQLRQILIKLDTIDSAEPLTSEDLTSIRRQLSEGQALLK 631

Query: 275 DEMSKLTILEKTRE 288
           + + KL   ++  +
Sbjct: 632 ETVDKLRQSQEEND 645


>gi|292493250|ref|YP_003528689.1| efflux transporter RND family, MFP subunit [Nitrosococcus
           halophilus Nc4]
 gi|291581845|gb|ADE16302.1| efflux transporter, RND family, MFP subunit [Nitrosococcus
           halophilus Nc4]
          Length = 339

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 4/128 (3%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQ 270
           Q +    E  + ++   L      Q    R +      AN +      L +   +L+ ++
Sbjct: 82  QLEKTDLELALKRAEATLTSLEARQALAQRQLTRAQSLANQKLITEEMLNQRQTELKVSK 141

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              A +   +  L +  E+  I +P    +   Q       A    PL++I+  ++   +
Sbjct: 142 AEMAVQRITVEQLRRDLEKTVIRAPFKAIVAE-QLSQVGELAMPGTPLIRIL-DAERILV 199

Query: 331 RAKVTPKQ 338
            AK+ P+ 
Sbjct: 200 SAKLQPRD 207



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 84/294 (28%), Gaps = 36/294 (12%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           +I    VE G  +  GTPL+  E  +    +   + ++ +L                   
Sbjct: 62  VIVSLPVEVGQVVETGTPLVQLEKTDLELALKRAEATLTSLEAR---------------- 105

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
              +A   R+      L        ++ N   + +  S      +  ++   R DLE K+
Sbjct: 106 ---QALAQRQLTRAQSLANQKLITEEMLNQRQTELKVSKAEMAVQRITVEQLRRDLE-KT 161

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            +     +   + L+ +  L          +   ERI+  + L+ R+ +  +        
Sbjct: 162 VIRAPFKAIVAEQLSQVGELAMPG-TPLIRILDAERILVSAKLQPRDPLSLRNAGTLEFV 220

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI--------A 297
              +   ++    +  +       +       +   I           +P          
Sbjct: 221 NGNNRYPVKLHRIIPALDLRQRSQEVRLRFLETPALIGTTGNLVWHPQAPHLPADLLVRR 280

Query: 298 GTIVYNQSFSSSNY-------AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKK 344
           G  +     ++          AQ+ QP    +P      I  +   +    V+ 
Sbjct: 281 GGAIGVFVLANGRAKFVTLPGAQEGQPAKINLPEDTPIIIDGRFIVQDGDTVRV 334


>gi|291225470|ref|XP_002732724.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 470

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/180 (11%), Positives = 61/180 (33%), Gaps = 2/180 (1%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR--M 171
           + +L+  + K  V E+  E   +Q ++ L   +    K        + R  +        
Sbjct: 118 QKSLNLRSEKEAVEERQREVARQQEVERLRLENERQQKQLEEEKHKLLRRQQEIEQELIQ 177

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           R     + +LE +     AL    ++       + +     Q ++ QQE    +     R
Sbjct: 178 RKQLSQQQELEMERQRKEALRREMEEKKQRQAQINKLERQRQREIKQQELAHQQELEMER 237

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++ E +       +  ++   +     +++    ++      ++ S++   +   ++  
Sbjct: 238 RHMEESRKEREANKQRQEQIRKQEIERQRQLELQRQRELHRQREQKSRMGHEKTQNQRND 297


>gi|259145593|emb|CAY78857.1| Spc110p [Saccharomyces cerevisiae EC1118]
          Length = 944

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 21/204 (10%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +  +  +  +  L   + T K  +  L N  DV      S+E++L + + + +   S   
Sbjct: 227 EEREQMERKLAELERKLKTVKDQVLELENNSDVQSLKLRSKEDELKNLMNELNELKSNAE 286

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     L+ K   +R   +   +L+ KS  +   L   Q +   +K+         
Sbjct: 287 EKDT-----QLEFKKNELRKRTIELNELKIKSDEMDLQLKQKQNESKRLKD--------- 332

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------YLKEISRDLE 267
            +LN+ E    ++  +     +E K +   I EL +E + + +        L  +   L 
Sbjct: 333 -ELNELETKFSENGSQSSAKENELKMLKNKIAELEEEISTKNSQLIAKEGKLASLMAQLT 391

Query: 268 QNQRTFADEMSKLTILEKTREQKT 291
           Q +       S+L   E+  ++  
Sbjct: 392 QLESKLNQRDSQLGSREEELKKTN 415



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 82/242 (33%), Gaps = 47/242 (19%)

Query: 94  DLIDLKKVSIKNLRCH-------IDTEKSALDFLNNKYDVLEKAFESR------------ 134
           + I   K  IK LR          DT +   D L N+   LEK  +++            
Sbjct: 163 NEIKSLKHEIKELRKEKNDTLNNYDTLEEETDDLKNRLQALEKELDAKNKIVNSRKVDDH 222

Query: 135 -----EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                E + ++          K     +  +  +  ++  ++RS      +L N+ + L+
Sbjct: 223 SGCIEEREQMERKLAELERKLKTVKDQVLELENNSDVQSLKLRSKEDELKNLMNELNELK 282

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           +        L   KN   K  +   +LN+ +    +  L+L++  +E K +   +NEL  
Sbjct: 283 SNAEEKDTQLEFKKNELRKRTI---ELNELKIKSDEMDLQLKQKQNESKRLKDELNELET 339

Query: 250 E--------------------ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +                       E    +   +  L   +   A  M++LT LE    Q
Sbjct: 340 KFSENGSQSSAKENELKMLKNKIAELEEEISTKNSQLIAKEGKLASLMAQLTQLESKLNQ 399

Query: 290 KT 291
           + 
Sbjct: 400 RD 401


>gi|241564326|ref|XP_002401880.1| CAP-Gly domain-containing linker protein, putative [Ixodes
           scapularis]
 gi|215501926|gb|EEC11420.1| CAP-Gly domain-containing linker protein, putative [Ixodes
           scapularis]
          Length = 1036

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/201 (7%), Positives = 70/201 (34%), Gaps = 11/201 (5%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK--YHSTC 149
                + ++ ++++L   +   ++  DFL+ +  +++     ++ QL     +       
Sbjct: 494 AKAREESQQQAVEDLNARLAQVQTDYDFLSEESRIIKSEAADQQRQLTSAEEQCAQLQGQ 553

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +     ++++  +      ++  +  +  + E +   L + + +  ++    +      
Sbjct: 554 KRGLEEELATLRLTASGGSQQVAQLNAHLQERERQVESLESQVRTLSQECERARQEAA-- 611

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEISRDL 266
               ++  + +    ++T +    +   +  L  +    +E             ++  +L
Sbjct: 612 ----HEAERLQAAAERATSDHGRQVAALEQRLADLECKLEERMSRCRTLEQTASDLRGEL 667

Query: 267 EQNQRTFADEMSKLTILEKTR 287
           EQ     AD+++      +  
Sbjct: 668 EQQGGALADKLAAAERRAEQL 688



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 75/221 (33%), Gaps = 8/221 (3%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD--VLEKAFES 133
            ++ Q    L  E     +  + +  S+  L    + E++ L  LN+     + +  F  
Sbjct: 335 EEVEQKMAALRAEHQRYVEETEQRAASLHQLLEEHEQERAQLTALNSDLQRKLEDLQFRI 394

Query: 134 REEQLLDFLGKYHSTCSKVFNY---GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            E+++L        +  ++          +  +L     R+ ++   + + +   S LR 
Sbjct: 395 EEQEILHSDNDQDHSTGELIAQYKDETQKLKDALASSQARVAALEAKQAEDQGTVSKLRE 454

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L +  + L  ++   E+ A     L  +   + +     +     Q+  +  +N    +
Sbjct: 455 ELLARDETLLRLEASLEQRAKELLVLRDRAFELEEGMAAAKAREESQQQAVEDLNARLAQ 514

Query: 251 ANLEFANYLKE---ISRDLEQNQRTFADEMSKLTILEKTRE 288
              ++    +E   I  +    QR       +   L+  + 
Sbjct: 515 VQTDYDFLSEESRIIKSEAADQQRQLTSAEEQCAQLQGQKR 555



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/216 (9%), Positives = 66/216 (30%), Gaps = 32/216 (14%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
               +     +   + L   + T +      + +   L    + RE Q+     +  +  
Sbjct: 541 TSAEEQCAQLQGQKRGLEEELATLRLTASGGSQQVAQLNAHLQERERQVESLESQVRTLS 600

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK------ 203
            +       + + + +++    R+   +   +      L  L    ++ ++  +      
Sbjct: 601 QECERARQEAAHEAERLQAAAERATSDHGRQVAALEQRLADLECKLEERMSRCRTLEQTA 660

Query: 204 -----NLFEKNAVSQNDLNQQERIVYKSTLELRE---------------------NIHEQ 237
                 L ++     + L   ER   +   +L++                        ++
Sbjct: 661 SDLRGELEQQGGALADKLAAAERRAEQLVAQLQQAKEEALEERRLRERDRDDLSAQTSDR 720

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           ++ L       +    EF+ + +++++ L +NQ   
Sbjct: 721 ESQLASAQAELERLRAEFSAHREDLAKQLRENQEET 756


>gi|209966966|ref|YP_002299881.1| HlyD family secretion protein [Rhodospirillum centenum SW]
 gi|209960432|gb|ACJ01069.1| HlyD family secretion protein [Rhodospirillum centenum SW]
          Length = 329

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 62/182 (34%), Gaps = 10/182 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSIL--LPI-EISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           A L  +  ++ +   G   WS      + +   SS+G I  E   ++I + ++G + +  
Sbjct: 4   APLLAILSVAALAGGGYTYWSSNQSSRVPDGFASSNGRIEVE--RIDITAKYAGRVAEML 61

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-----LRCHIDTEKSALDFLNNKYDV 126
           V  G  + +G  +   +D ET   +   + S++      ++   +      +F  +K ++
Sbjct: 62  VREGDDVSKGAVVARLDDNETRARLLAARASVRRAEEAVVKAQAEQRIREAEFDLSKVEL 121

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                  R               + V    +     ++       ++       +E   +
Sbjct: 122 RRAVELERRSAGPVMDVDRRKAANAVAEATVKGAQAAVADAEAAKQAAEAEVAQIEAVLA 181

Query: 187 LL 188
            L
Sbjct: 182 EL 183



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 82/305 (26%), Gaps = 25/305 (8%)

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D    +    E + +D   KY    +++       V +   +            L    
Sbjct: 32  PDGFASSNGRIEVERIDITAKYAGRVAEMLVREGDDVSKGAVVARLDDNETRARLLAARA 91

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
                   +   Q +  + +  F+ + V      + ER      +++     +++     
Sbjct: 92  SVRRAEEAVVKAQAEQRIREAEFDLSKVELRRAVELERRSAGPVMDV-----DRRKAANA 146

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
           + E   +         +   +  E         +++LT+           +P+AG +   
Sbjct: 147 VAEATVKGAQAAVADAEAAKQAAEAEVAQIEAVLAELTLA----------APVAGRV-EY 195

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +             L  ++  +   ++   +  +Q   +  G  A +      D      
Sbjct: 196 KLVQLGEVVPAGGRLATLLDLTD-VFMTVFLPTRQAGQLALGSEARIVLDALPDYVFP-- 252

Query: 364 KAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            A +  +         S +    + +  Y V L       +     +R G   +      
Sbjct: 253 -ATVTFVAAEAQFTPKSVETAEEREKLMYRVKLSGDPALLATFRRHVRAGLTGQAYVRLD 311

Query: 419 NTTLA 423
            T   
Sbjct: 312 PTVAW 316


>gi|195049184|ref|XP_001992667.1| GH24880 [Drosophila grimshawi]
 gi|193893508|gb|EDV92374.1| GH24880 [Drosophila grimshawi]
          Length = 430

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 75/210 (35%), Gaps = 7/210 (3%)

Query: 86  TFEDIETTDLIDLKK-VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           T E +E     + ++  +I+ LR  I   +S            EK  E  EEQ      +
Sbjct: 58  TLELLEALATKNERENTTIQELREKIAQLESEKLEKAEFRRRFEKELELIEEQWRSETNE 117

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                S + +     V ++  ++ +  +S  L     E+  S+    L S   D  +++ 
Sbjct: 118 LVDLVSSLQDENKRLVKQTQDLQSSSAQSSGLGASLTESIISMTNNELHSALSDTQVLQR 177

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELR------ENIHEQKNMLRHINELYDEANLEFANY 258
           L E+    +++L Q+ER +     EL       E +   +   R  ++L           
Sbjct: 178 LKEQIYKQRDELKQRERELQDKYSELEHVNIQAERLKASERDTRRRHKLMQTQVKTLCEE 237

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             +    L+   R       +L + EK  E
Sbjct: 238 RADFLAQLQDQCREINQLRKRLGLAEKENE 267


>gi|332093898|gb|EGI98951.1| hypothetical protein SD15574_1783 [Shigella dysenteriae 155-74]
          Length = 256

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 30  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNFIS 88

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 89  AEELDTANLNVKAMQASVDAAQATLKQTQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 147

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +  +  I 
Sbjct: 148 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHVSSIG 198

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 199 RAIYDQS 205



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 38/122 (31%), Gaps = 11/122 (9%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKV 101
            G+I  E   V I    SG I +  +++   +  G  LLT +       E      L K 
Sbjct: 8   DGKIRAEQ--VSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKA 65

Query: 102 SIKNLRCHIDTEKSALDFLNN----KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                + + +  +      N     + D      ++ +  +         T  ++    I
Sbjct: 66  QSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQTQWQLAQTEI 125

Query: 158 SS 159
            +
Sbjct: 126 RA 127


>gi|46578853|ref|YP_009661.1| RND family efflux transporter MFP subunit [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|46448265|gb|AAS94920.1| efflux transporter, RND family, MFP subunit [Desulfovibrio vulgaris
           str. Hildenborough]
          Length = 486

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 4/91 (4%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +     V  ++S  +G +       G  + +G  L T +       +   +   + 
Sbjct: 96  AVGNVEASATVQ-VRSRITGELTGIHFREGDDVRKGQKLFTIDPRPMEAALREARARQER 154

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            R  +     A D L     ++E  F SRE+
Sbjct: 155 TRAQLT---KAEDDLRRFASLVEGGFVSREQ 182


>gi|84625614|ref|YP_452986.1| membrane fusion protein precursor [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|122879326|ref|YP_202827.6| membrane fusion protein precursor [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84369554|dbj|BAE70712.1| membrane fusion protein precursor [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 414

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/135 (11%), Positives = 45/135 (33%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            S+ G +    N V +    SG +     + G ++ +G  L   +        D    + 
Sbjct: 64  ASALGTVT-ALNTVTVSPQVSGQLMSLNFKEGQEVKKGDLLAQIDPRTLQASYDQALAAK 122

Query: 104 KNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T +      N+      V     +++  Q+  +     +  +++ +  +   
Sbjct: 123 RQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQRNQVAQYEAAVSANDAQMRSAQVQLQ 182

Query: 161 YRSLKMKLTRMRSIY 175
           +  +   +  +  I 
Sbjct: 183 FTRITAPIDGIAGIR 197



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 58/179 (32%), Gaps = 12/179 (6%)

Query: 206 FEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEI 262
            +K   ++Q D    +    ++    R+N         +     D A  ++ +   L   
Sbjct: 97  VKKGDLLAQIDPRTLQASYDQALAAKRQNQALLATSRVNYQRSNDPAYKQYVSRTDLDTQ 156

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + Q +   +   +++   +   +   I +PI G I   +     N    +  L+ + 
Sbjct: 157 RNQVAQYEAAVSANDAQMRSAQVQLQFTRITAPIDG-IAGIRGVDVGNIVSSTSTLVTLT 215

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTAT-VRFPHYADIRE------KKFKAIIEKIDPII 374
              +  Y+   +  ++++ V+ G  AT +                 K   I  +I    
Sbjct: 216 -QIRPIYVSFNLPERELEAVRAGQAATPLSVAALDRGDAHVISGDGKLDVIDNRISADS 273


>gi|46143619|ref|ZP_00134805.2| COG0845: Membrane-fusion protein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
          Length = 333

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 43/125 (34%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I +  SG IK   V+ G ++ +G  L   +       + L K  + N   ++DT+K  L 
Sbjct: 9   IGAQVSGQIKHILVQEGQKVKKGELLAVIDPRLAETELKLAKAELANASANLDTKKINLK 68

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            L + ++  ++   +      +         +      I+     +           L  
Sbjct: 69  QLQSDWERHQRLIRTNATSQKETEEAKSRLNTAKAELQIAQNNLDIAKIRVEKAETELGY 128

Query: 179 LDLEN 183
            ++ +
Sbjct: 129 TEIRS 133



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 85/267 (31%), Gaps = 16/267 (5%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            ++    +  +++      L +   + K   L A++     +  +         +++ +L
Sbjct: 2   QATEQVDIGAQVSGQIKHILVQEGQKVKKGELLAVIDPRLAETELK--------LAKAEL 53

Query: 217 NQQERIVYKSTLELRENIH--EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
                 +    + L++     E+   L   N    +   E  + L     +L+  Q    
Sbjct: 54  ANASANLDTKKINLKQLQSDWERHQRLIRTNATSQKETEEAKSRLNTAKAELQIAQNNLD 113

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYIRAK 333
               ++   E       I SP+  T++   + +        Q P++  + +     +  K
Sbjct: 114 IAKIRVEKAETELGYTEIRSPLDATVISVFAQNGQTLVTTQQVPVLMKLANIDTMKVNTK 173

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           ++   + H++ G   +      +D +      +++     I+    N     YY    K+
Sbjct: 174 ISEADVIHIQAGAPTSFTLLGESDSQFHGQLDMVKLAPVHITDTTENTNNAIYYYATFKV 233

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNT 420
                 + +  LR    A V       
Sbjct: 234 P-----NPDHRLRISMTAAVTIMLDKR 255


>gi|283852368|ref|ZP_06369638.1| efflux transporter, RND family, MFP subunit [Desulfovibrio sp.
           FW1012B]
 gi|283572216|gb|EFC20206.1| efflux transporter, RND family, MFP subunit [Desulfovibrio sp.
           FW1012B]
          Length = 410

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 5/127 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +   P+  +V   G +      V ++S  +G+IKK  V  G  + +G  LL  +      
Sbjct: 57  ATTAPM--AVDGIGHVYAV-RTVSVRSQVTGVIKKTLVGEGDVVKEGQSLLVIDPAPYKA 113

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +D    ++   +     E+S  D+L  K  V +      + +      +      +V  
Sbjct: 114 QLDQATSTLGRDKA--TAEQSKRDWLRYKDLVAQGVVSQDDYEQKRTTYQQALEQVRVDE 171

Query: 155 YGISSVY 161
             + S  
Sbjct: 172 AAVVSAQ 178


>gi|239832735|ref|ZP_04681064.1| efflux transporter, RND family, MFP subunit [Ochrobactrum
           intermedium LMG 3301]
 gi|239825002|gb|EEQ96570.1| efflux transporter, RND family, MFP subunit [Ochrobactrum
           intermedium LMG 3301]
          Length = 421

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 69/189 (36%), Gaps = 30/189 (15%)

Query: 10  KRNHPASLKRMTLLSIIGIIGLITWSILLP-------------------IEISVSSSGEI 50
           KR    + +    L I  I     W                        IE ++++ G +
Sbjct: 21  KRAPRKARRWWLWLPIAAIAVGAGWYFYGSGEAGGQKTNYLAETVTRGDIENAITAVGTL 80

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
            +    + + +  SG +K  +VE G Q+ QG  +   +       +++    + NL+  +
Sbjct: 81  -SALRSINVGAQVSGQLKSVKVEVGDQVKQGQLIAEIDPSPFEKKVEIASAQLDNLKAQL 139

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY--RSLKMKL 168
            ++++ L         L+KA  +R+  LL   G   ST  +       +    ++L  ++
Sbjct: 140 LSKQAQL--------TLKKANAARQRSLLATRGVSQSTVDQADADLAMADADVKALGAQI 191

Query: 169 TRMRSIYLN 177
            +  +   +
Sbjct: 192 RQQEAQLAS 200



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 64/172 (37%), Gaps = 6/172 (3%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           A +Q D  + + +  ++ L L++    ++  L     +      +    L     D++  
Sbjct: 128 ASAQLDNLKAQLLSKQAQLTLKKANAARQRSLLATRGVSQSTVDQADADLAMADADVKAL 187

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL-- 327
                 + ++L   +       I SP+ GT+V  Q+          Q    IV  + L  
Sbjct: 188 GAQIRQQEAQLASDKVDLGYTKIYSPMEGTVVD-QAAKEGETLNAVQSAPTIVTVADLKV 246

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
             + A+V+   I  +K G      F       EK+F   + +I P  + ++N
Sbjct: 247 MTVEAQVSEADIGRLKPGMPVY--FTLLGQ-PEKRFTGTLRQIKPTPATENN 295


>gi|241957281|ref|XP_002421360.1| DNA repair protein, putative; growth, DNA repair, interchromosomal
           and sister chromatid recombination protein, putative;
           structural maintenance of chromosomes (SMC) protein,
           putative [Candida dubliniensis CD36]
 gi|223644704|emb|CAX40694.1| DNA repair protein, putative [Candida dubliniensis CD36]
          Length = 1128

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 67/181 (37%), Gaps = 10/181 (5%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             LR  ++   + + + N +    + + E+R+E       K            I +    
Sbjct: 322 DALRNKLEMLNAKIYWFNVQTIEKKISQENRQEDACLQEIKEAKNQVDACEKAIEAKIPR 381

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                  ++ + +   D+  +   LR+  S  + +L + K   +KN    N L +     
Sbjct: 382 KNAADQEVKQVEIQIRDIVEEFEQLRSKRSEIKSELEINKKETKKNIDEMNSLKE----- 436

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                ++     + +   R I EL      + A  L++++ ++++ ++   D   +L  +
Sbjct: 437 -----DISRTETKIEQERRKIQELQGGNKEKIAEELEQLNSEIDELEKQMEDLKKQLGQI 491

Query: 284 E 284
           +
Sbjct: 492 Q 492


>gi|281357668|ref|ZP_06244155.1| Membrane-fusion protein-like protein [Victivallis vadensis ATCC
           BAA-548]
 gi|281315925|gb|EFA99951.1| Membrane-fusion protein-like protein [Victivallis vadensis ATCC
           BAA-548]
          Length = 234

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 57/189 (30%), Gaps = 22/189 (11%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +  LE+R    +            D   L   N+  +   +L++ +   +   S L   
Sbjct: 63  SRYALEVRRATEQADFARAV---FEDRKQLRAKNFTSD--HELKKAEFDLSVAESSLADA 117

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
           +       + +P AG +   ++       +  QPL +I+           V         
Sbjct: 118 KLNLSYCIVKAPFAGKLAEIRTQEY-ETVRPGQPLFRII-DDNRLLAVMNVPLNDAALTT 175

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G    V          +K K  + ++ P    +           V +++      + + 
Sbjct: 176 VGNPVVVSVSGTD----RKAKGTVYEVAPQADHRTGT--------VRIRV---LIDNGDG 220

Query: 404 ELRNGFPAE 412
           +LR G   E
Sbjct: 221 KLRAGMTGE 229


>gi|124008598|ref|ZP_01693289.1| efflux transporter, RND family, MFP subunit, putative [Microscilla
           marina ATCC 23134]
 gi|123985842|gb|EAY25706.1| efflux transporter, RND family, MFP subunit, putative [Microscilla
           marina ATCC 23134]
          Length = 496

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 82/259 (31%), Gaps = 23/259 (8%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           I+S+ RS      +     L++   +   + L   L   +        L       +   
Sbjct: 91  IASLDRSELADKLKNEQTELDKASSQFTQAKLDTTLELRE----ARDKLINLRYAQREKG 146

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              E    +S  E    I + +  L        ++   +     +    +++     +  
Sbjct: 147 LVLE----QSKYEPPATIKQAQIDLEKAKRALIQSTQNYLIKKDKAIAKMQEAGANLSKV 202

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQS-----FSSSNYAQQSQPLMKIVPHSKLTYIR 331
            SK+  L+K  ++  I +P +G ++Y ++         +        +  +P   +   R
Sbjct: 203 ESKVEFLQKLMKEFNITAPKSGMMIYARTWDGKKKREGSTISAWNSTVATLPDLSVMVSR 262

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             +    I+ +K G    +    +     K+    +  I  +  Q+ N+      +EV +
Sbjct: 263 TYINEVDIKKIKNGQKVKIGLDAFPK---KQLTGKVINIANVGEQKPNSDAK--VFEVNI 317

Query: 392 KITDLAFSDNNIELRNGFP 410
           +I +         L     
Sbjct: 318 EIHEQDSL-----LLPSMT 331


>gi|625870|pir||A44643 M protein precursor - Streptococcus pyogenes (serotype M57)
           (fragment)
          Length = 501

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/198 (10%), Positives = 58/198 (29%), Gaps = 9/198 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL---------LD 140
            E    +D  K  + N +  +D  K+ +  L  +  + E + +     L         L+
Sbjct: 237 TELQAKLDETKQELANQQAQLDAYKAEIAKLIQENKISEASRQGLRRDLDASREAKKQLE 296

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
              +     +K+       + R L       + +  +  +L  +   ++           
Sbjct: 297 AEHQKLEEQNKISEASRQGLRRDLDASREAKKQVEKDLANLTAELDKVKEEKQISDASRQ 356

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            ++   + +  ++  + +           L +   E +   +   +   E   +     K
Sbjct: 357 GLRRDLDASREAKKQVEKALEEANSKLAALEKLNKELEESKKLTEKEKAELQAKLEAEAK 416

Query: 261 EISRDLEQNQRTFADEMS 278
            +   L +     A   +
Sbjct: 417 ALKEQLAKQAEELAKLRA 434


>gi|85712484|ref|ZP_01043533.1| Chromosome segregation ATPase, sms [Idiomarina baltica OS145]
 gi|85693762|gb|EAQ31711.1| Chromosome segregation ATPase, sms [Idiomarina baltica OS145]
          Length = 581

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/211 (8%), Positives = 68/211 (32%), Gaps = 3/211 (1%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              + +           ++  R   +        ++ +    E      + Q   +   +
Sbjct: 239 QLNEKQNQLREQRSHYRLELDRWQTEQTGDEKGVISLREHAEELKQRVEQAQQAVYECNH 298

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT-MMKN 204
                +        + +  + ++ +++       + + + S     L+    +L   ++ 
Sbjct: 299 QIMRIEQAMQHQRQLEQQREARVAQLKQEREQLTEHDAEDSQSAERLAQKIAELEPGLEQ 358

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN--MLRHINELYDEANLEFANYLKEI 262
           L  +  ++    ++    + +   +  +   + +     R  NEL  + +    ++ +E 
Sbjct: 359 LEAQLEMATTRHDEAREQLQRVEHDEEQTRRQMREVEQQRQRNELALQQSEHTISHSREA 418

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             DLE+ +     ++  + I E+  +   I 
Sbjct: 419 LTDLEEQRVQVTQQIQAIGIAEQQEKLADIR 449


>gi|325980936|ref|YP_004293338.1| efflux transporter, RND family, MFP subunit [Nitrosomonas sp.
           AL212]
 gi|325530455|gb|ADZ25176.1| efflux transporter, RND family, MFP subunit [Nitrosomonas sp.
           AL212]
          Length = 524

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 82/251 (32%), Gaps = 22/251 (8%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           ++          +  KV   G+ +    L+  +  +R++   ++D   + +++       
Sbjct: 79  DEAPSDQRIVAISTEKVQKLGVRTETAELRELIRTVRAVATVQMDERKQYTVVTKFEGWI 138

Query: 196 QK-DLTMMKNLFEKNA----VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
           Q+  +        K      V   DL   ++    +   L+       ++   +  L   
Sbjct: 139 QRLYVNTTGQAVRKGDALMDVYSPDLIAAQQEYLIAVRGLQSVADGDPDVRAAMQRLVVS 198

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           A  +  N+                 E+  L    + R+  T+ S   G ++  +      
Sbjct: 199 ALQKLRNWDV------------AESEVRHLQQTGEVRQYLTLRSKADGVVLEKKVI-EGQ 245

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                + L +I   S +  + A V  + +  +  G   T+R   Y D     F   +  I
Sbjct: 246 RFMPGETLYQIADLSSVWML-ADVFEQDLGMIHSGQPVTLRVDAYPDKI---FNGEVAFI 301

Query: 371 DPIISQQDNNL 381
           +P+++ +    
Sbjct: 302 NPVVTPETRTA 312


>gi|251772173|gb|EES52743.1| secretion protein HlyD family protein [Leptospirillum
           ferrodiazotrophum]
          Length = 312

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 95/306 (31%), Gaps = 44/306 (14%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           LD + ++          ++ Q++          S++F         +L   + +++    
Sbjct: 42  LDPITSRIAGPVARVLIKDNQVVHAGDVLIEIDSRLFQSTYDKDQAALARDMAQLKV--- 98

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
               L       RA     +++     NL +K   + + L++       +  + + +   
Sbjct: 99  ----LSATIERDRANSDLAKRESRRTLNLSKKAFATASRLDKDMSAYQMAQAQTKADTEA 154

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            K +   I+   DEA L   +                                  +L+P+
Sbjct: 155 MKVLKETIH--RDEAVLAIDSI---------------------------NLRYTKVLAPV 185

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            G I   ++     Y    Q +  +VP +   ++ A      +  +++G   T++     
Sbjct: 186 DGRITG-KTIELGTYLTPGQIVGYVVPFN--MWVVANYKETDLHGIRQGDPVTIKVDALP 242

Query: 357 -DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF----SDNNIELRNGFPA 411
                    +I +    ++S       T  + +V+ ++         SD +  LR G   
Sbjct: 243 GQTFHGHVDSIAQSTGAVLSLLPPENATGNFTKVVQRVPVKILIDPGSDPDHRLRIGMSV 302

Query: 412 EVLFTA 417
             +   
Sbjct: 303 VPVVLT 308



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 67/190 (35%), Gaps = 10/190 (5%)

Query: 18  KRMTLLSIIGIIGLITWSIL-LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           K+  + ++  +IG+ + S L      S  S+ +     ++  I S  +G + +  +++  
Sbjct: 3   KQALIATVATVIGIGSASALYASYTRSHISTDDAQITGHLDPITSRIAGPVARVLIKDNQ 62

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G  L+  +        D  + ++      +    + ++      D+ +     RE 
Sbjct: 63  VVHAGDVLIEIDSRLFQSTYDKDQAALARDMAQLKVLSATIERDRANSDLAK-----RES 117

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +    L K     +   +  +S+      M   + ++       L+       A+L+   
Sbjct: 118 RRTLNLSKKAFATASRLDKDMSAYQ----MAQAQTKADTEAMKVLKETIHRDEAVLAIDS 173

Query: 197 KDLTMMKNLF 206
            +L   K L 
Sbjct: 174 INLRYTKVLA 183


>gi|190576445|ref|YP_001974290.1| putative HlyD family secretion protein [Stenotrophomonas
           maltophilia K279a]
 gi|190014367|emb|CAQ48014.1| putative HlyD-family secretion protein [Stenotrophomonas
           maltophilia K279a]
          Length = 305

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 70/225 (31%), Gaps = 27/225 (12%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V +            +  E + ++ + +  +     L D    E A   +   +     
Sbjct: 77  VVDRARYRIALEQARANLAERQASVAQLRREIGRDRSLQDLVAAEDAEVRRAKLQA---A 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   A   + + + E    +  + +P  G +   ++    +Y    +P++ ++  +    
Sbjct: 134 QAALATAQAAVDLAELNLGRTEVRAPADGRVND-RTLRVGDYVVAGKPVLALL-DTGSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID---------------PII 374
           +       +++ V  G +  +R            +  +E I                P +
Sbjct: 192 VDGYFEETRLRGVAPGQSVDIRL----MGESAPLRGHVESIAAGIEDRYRSNGSTLLPNV 247

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +   + ++  +   V + I ++      +EL  G  A V      
Sbjct: 248 TPAFDWVRLAQRIPVRIAIDEV---PKGVELIAGRTATVTVDTGR 289



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 31/79 (39%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV++    SG+++  QV +   + +G  L   +       ++  + ++   +  + 
Sbjct: 43  VGADVVQVAPDVSGLVETVQVADNQAVTKGDLLFVVDRARYRIALEQARANLAERQASVA 102

Query: 112 TEKSALDFLNNKYDVLEKA 130
             +  +    +  D++   
Sbjct: 103 QLRREIGRDRSLQDLVAAE 121


>gi|171681188|ref|XP_001905538.1| hypothetical protein [Podospora anserina S mat+]
 gi|170940552|emb|CAP65780.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1124

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/223 (11%), Positives = 82/223 (36%), Gaps = 8/223 (3%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            ++ +   +   + +E    ++  K  +   R  +D ++  +       D + +  +  E
Sbjct: 455 DEVEKERDVERTDKVELYGKLEATKQVMDEFRNTMDLQRVMIMEAEQSRDDIREIKDKLE 514

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            ++ D   +          +    + + +     R  ++   R + + + + L A+  + 
Sbjct: 515 VRVQDLERELEKLHIDRKEHE-DLLSQQIVALDVRNSALLEQRDNRDKEIAELTAMRDAM 573

Query: 196 QKDLTMMK----NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           ++++  +K    +L  +   ++ +   Q+ I  K++ EL+E     +   + I E  +E 
Sbjct: 574 KEEIEALKVWVSDLTAEKLAAEEE---QQNIKIKASGELQEVRRAAEEEQQRITEAAEEE 630

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                   +E  + + Q        +++     +   + T  +
Sbjct: 631 QQRITKAAEEEQQRIAQAAEEERRRITQAAEEAEQALRTTFAA 673



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 22/221 (9%), Positives = 73/221 (33%), Gaps = 11/221 (4%)

Query: 82  TPLLTFE--DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-NKYDVLEKAFESREEQL 138
             ++  +  +    +  D +   I  L    D  K  ++ L     D+  +   + EEQ 
Sbjct: 540 QQIVALDVRNSALLEQRDNRDKEIAELTAMRDAMKEEIEALKVWVSDLTAEKLAAEEEQQ 599

Query: 139 -----LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
                     +     ++     I+      + ++T+       R+    +    R   +
Sbjct: 600 NIKIKASGELQEVRRAAEEEQQRITEAAEEEQQRITKAAEEEQQRIAQAAEEERRRITQA 659

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + + +  +           Q ++++ ++ +     EL +     +     + +   +   
Sbjct: 660 AEEAEQALRTTFAADREALQKEIDEGQQPLRARIEELEKERDALEAAKAALEQERSDLQS 719

Query: 254 EFANYLKEIS---RDLEQNQRTFADEMSKLTILEKTREQKT 291
                 +EI+     +++   + +++ +K++ LE+      
Sbjct: 720 ALNTANEEIAALKAQVKELTLSGSEQATKISALEEELASTQ 760


>gi|332529689|ref|ZP_08405643.1| hypothetical protein HGR_07211 [Hylemonella gracilis ATCC 19624]
 gi|332040710|gb|EGI77082.1| hypothetical protein HGR_07211 [Hylemonella gracilis ATCC 19624]
          Length = 492

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE  V+++G +   D V ++ +  SG + K  VE GS++  G  L      ++   +   
Sbjct: 37  IEDVVTATGLLQPRDYV-DVGAQVSGQLNKILVEVGSEVQAGQLLAEIGAEQSAARVTAN 95

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S++  R  +   +  ++    + D+  +     +E       +   T        I S
Sbjct: 96  RASLRAQRATLAQRQ--VELAKAERDLRRQKNLLADEATTAEAVQNAETTVLSTRAQIQS 153

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   ++     M+    N
Sbjct: 154 LEAQIEQADASMQVEEAN 171



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 68/193 (35%), Gaps = 15/193 (7%)

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y  +  +++   +  L  +  E ++  L A + + Q    +  N        +  L  Q 
Sbjct: 52  YVDVGAQVSGQLNKILVEVGSEVQAGQLLAEIGAEQSAARVTAN--------RASLRAQR 103

Query: 221 RIVYKSTLELRENIHEQKNMLRHI--NELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
             + +  +EL +   + +     +       EA       +      ++  +       +
Sbjct: 104 ATLAQRQVELAKAERDLRRQKNLLADEATTAEAVQNAETTVLSTRAQIQSLEAQIEQADA 163

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVT 335
            + + E   +   I +P+AGT+V   +         +Q    +++I     +  ++A+V+
Sbjct: 164 SMQVEEANLKYAKIYAPMAGTVVSISAR-QGQTLNANQSAPTILRIA-DLSVMTVQAQVS 221

Query: 336 PKQIQHVKKGYTA 348
              +  ++ G   
Sbjct: 222 EADVSRLRVGMPV 234


>gi|326931107|ref|XP_003211677.1| PREDICTED: myosin-7-like, partial [Meleagris gallopavo]
          Length = 1477

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 73/214 (34%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   L+  +D   S ++ L      LEK   + E+Q+ +   K 
Sbjct: 952  QLDNLQRVKQKLEKEKS--ELKLELDDVSSNMEQLIKAKANLEKMCRTTEDQMNEHRSKS 1009

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  V                + R L+ K   +  +   +L    +   L+  L    
Sbjct: 1010 EEAQRMVADLSTQRAKLQTENGELSRQLEEKEAFINQLMRGKLTYTQQLEDLKRQLEEEA 1069

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1070 KAKNALAHALQSARHDCDLLREQYEEETEAKAELQRTLSKANSEVAQWRTKYETDAIQRT 1129

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L+E  + L Q  +   + +  +     + E+ 
Sbjct: 1130 EELEEAKKKLAQRLQEAEEAVEAVNAKCSSLEKT 1163



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 70/186 (37%), Gaps = 5/186 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                    + +   L+  I+   + L+  N     L+K   + ++ L ++  K+  + ++
Sbjct: 1153 VNAKCSSLEKTKHRLQNEIEDLMADLERSNAAAAALDKKQRNFDKILSEWKQKFEESQTE 1212

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +      S  RSL  +L ++++ Y   L+        +    + Q++++ +      +  
Sbjct: 1213 LEASQKES--RSLSTELFKLKNAYEESLE---HLETFKRENKNLQEEISDLTEQLGASHK 1267

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            + ++L +  + +    LEL+  + E +            A LEF     +  R L + + 
Sbjct: 1268 TIHELEKVRKQLDAEKLELQAALEEAEVSKTPREGRVLRAQLEFNQVKADYERKLAEKEE 1327

Query: 272  TFADEM 277
                  
Sbjct: 1328 EMEQAK 1333



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 72/224 (32%), Gaps = 19/224 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  +  + +  K   +  L   I+ E++    L  K   L+   
Sbjct: 802  EGDLKLAQESIMDLENDKQQLEERLKKKDFELNALNARIEDEQAVAGQLQKKLKELQARI 861

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE+L            +     +S     +  +L         +L+L  K       
Sbjct: 862  EELEEELEAERTGR--AKVEKLRSDLSQELEEISERLEEAGGATSVQLELNKKREAEFQK 919

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            L    ++ T+                   +    S  EL E +   + + + + +   E 
Sbjct: 920  LRRDLEEATLQHEATA---------AALRKKHADSVAELSEQLDNLQRVKQKLEKEKSEL 970

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             LE  +       L +   +LE+  RT  D+M++     +  ++
Sbjct: 971  KLELDDVSSNMEQLIKAKANLEKMCRTTEDQMNEHRSKSEEAQR 1014


>gi|254670289|emb|CBA05604.1| colicin V secretion protein [Neisseria meningitidis alpha153]
          Length = 208

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 50/159 (31%), Gaps = 8/159 (5%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
             P S    T  + I  + +I + I        +  G+IL    V+ + +P +G I    
Sbjct: 28  TRPLSFSLWTTFASISALLIILFLIFGNYTRKTTVEGQILPASGVIRVYAPDTGTITAKF 87

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           VE+G ++  G  L             +++         + TE      L  +     K  
Sbjct: 88  VEDGEKVKAGDKLFALSTSRFGAGGSVQQ--------QLKTEAVLKKTLAEQELGRLKLI 139

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              E + L    +            I    R +++   +
Sbjct: 140 HENETRSLKATVERLENQKLHILQQIDGQKRRIRLAEDQ 178


>gi|146283469|ref|YP_001173622.1| RND efflux membrane fusion protein precursor [Pseudomonas stutzeri
           A1501]
 gi|145571674|gb|ABP80780.1| probable RND efflux membrane fusion protein precursor [Pseudomonas
           stutzeri A1501]
 gi|327481866|gb|AEA85176.1| RND efflux membrane fusion protein precursor [Pseudomonas stutzeri
           DSM 4166]
          Length = 377

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 70/201 (34%), Gaps = 31/201 (15%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI--------- 282
           + I    + +   + +  EA+L  A    + +R L   Q     E  +L           
Sbjct: 94  QAIVLLDSEMEQASLVSAEADLSLARLEFQRARSLLDRQAISRSEYDRLNAQSQKAEASV 153

Query: 283 --LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAKVTPKQI 339
             L  +  +K IL+P +GTI   +     +Y     P+  +        Y+   +  + +
Sbjct: 154 AQLRASLAKKRILAPFSGTI-GIRQVDVGDYIAAGTPIATL--QDLSTLYVDFFLAEQHV 210

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             +  G    +R   Y D R   F+ +I  ++P +     N+Q                +
Sbjct: 211 PLLALGQKVQLRVAAYPDER---FEGVISALNPKVETTTRNVQV-----------RAELA 256

Query: 400 DNNIELRNGFPA--EVLFTAK 418
           + +  L  G  A  +VL   +
Sbjct: 257 NPDGRLLPGMFADLQVLLPTE 277



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 29/88 (32%), Gaps = 3/88 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL---N 121
           G I   Q ++G ++ +G  ++  +       +   +  +   R      +S LD      
Sbjct: 77  GTITDVQFQSGEKVSKGQAIVLLDSEMEQASLVSAEADLSLARLEFQRARSLLDRQAISR 136

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTC 149
           ++YD L    +  E  +           
Sbjct: 137 SEYDRLNAQSQKAEASVAQLRASLAKKR 164


>gi|160898723|ref|YP_001564305.1| RND family efflux transporter MFP subunit [Delftia acidovorans
           SPH-1]
 gi|160364307|gb|ABX35920.1| efflux transporter, RND family, MFP subunit [Delftia acidovorans
           SPH-1]
          Length = 410

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 56/141 (39%), Gaps = 6/141 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               IE +V++ G +     V ++ +  SG + + +VE G+Q+ +G  L+  +       
Sbjct: 42  ARTDIESTVTAIGTLQPRRYV-DVGAQVSGQVTRLRVEPGAQVEKGALLVEIDPSVQRAT 100

Query: 96  IDLKKVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +D  + S+  LR  +      +   +    +   L +   +REE L        +  +++
Sbjct: 101 VDAGRASLAGLRAQLAEQQALRKLAEQQLTRQRQLARDGATREEDLQTAEANLAAAGARM 160

Query: 153 --FNYGISSVYRSLKMKLTRM 171
                 I     +LK    R+
Sbjct: 161 EHLKAQIDQTQATLKADEARL 181



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 83/264 (31%), Gaps = 19/264 (7%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           + +       + D ++ +   +    S   L + +    ++  +L E    ++  L    
Sbjct: 81  AQVEKGALLVEIDPSVQRATVDAGRASLAGL-RAQLAEQQALRKLAEQQLTRQRQLARDG 139

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              +E        L      +E  +       + L   E       I +P+AGT+V  ++
Sbjct: 140 ATREEDLQTAEANLAAAGARMEHLKAQIDQTQATLKADEARLGYTRIYAPMAGTVVSVEA 199

Query: 306 FSSSNYAQQ---SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY---ADIR 359
                       +  +++I        +  +V+   ++ V+        F         R
Sbjct: 200 R-EGQTLNATYQTPNILRIA-DLSAMTVWTEVSEADVRRVRDDMPVY--FTTLGGADQAR 255

Query: 360 EKKFKAIIEKI--DPIISQQ----DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            +++ + + ++   P  SQ     +         + +         + + EL     A+V
Sbjct: 256 PRRWSSKVRQVLPSPSASQAPAGGNAGQAPAPATKAVAYTVLFDVDNEDAELMPQMTAQV 315

Query: 414 LFTAKNTTLAQEIIHPITDNWPKI 437
           +F       AQ +  P+     K 
Sbjct: 316 VFVTGQ--AAQALTVPLMAVADKA 337


>gi|317061912|ref|ZP_07926397.1| conserved hypothetical protein [Fusobacterium sp. D12]
 gi|313687588|gb|EFS24423.1| conserved hypothetical protein [Fusobacterium sp. D12]
          Length = 227

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 10/132 (7%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKS----ALDF 119
           +K+  V+ G  + +G  L+TF+D+    L+   + +K+ ++ LR +   E S        
Sbjct: 78  VKEIFVKEGDYVEKGQVLMTFDDLSKNKLLRSMEKEKLQLQKLRRNYQIESSLEKIGGAS 137

Query: 120 LNNKYDVLE--KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           LN+  D+ E  +  E   E+L +   K  S      N  ISS+       L    S  L 
Sbjct: 138 LNSLKDMREEIRLHELSLEELNEDFRKTASEILSPANGTISSLTAQEN-YLVNTDSPLLK 196

Query: 178 RLDLENKSSLLR 189
             DL N   +L 
Sbjct: 197 IADLSNIKIVLE 208


>gi|291279830|ref|YP_003496665.1| RND efflux system membrane fusion protein [Deferribacter
           desulfuricans SSM1]
 gi|290754532|dbj|BAI80909.1| RND efflux system, membrane fusion protein [Deferribacter
           desulfuricans SSM1]
          Length = 380

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 65/161 (40%), Gaps = 10/161 (6%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           ++ + G + + +N   + +  SG + K   +NG  + +G  L   +D +    +    + 
Sbjct: 58  TIPALGVVKSSENA-VLSTRLSGRVLKVFKQNGDLVKKGELLAIIDDNDLRSKLSSLAIE 116

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
             N+   I+++K+ L+ L  K   L      R ++LLD  G              ++   
Sbjct: 117 KSNINIEINSQKANLEALKVKLANL-LDTHKRTKELLDVKGASIE--------QYNNEET 167

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           ++     ++ S+      L+NK  +L   +   +  +T  K
Sbjct: 168 AIAATKAQISSLENAIKGLKNKLGILNNSIKEIKNQITYAK 208



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           DL +K S L    S+   ++   K   E   V   +L    +   +       +I +  N
Sbjct: 105 DLRSKLSSLAIEKSNINIEINSQKANLEALKVKLANLLDTHKRTKELLDVKGASIEQYNN 164

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               I     +           +   ++  +       + +  ++       I SPI G 
Sbjct: 165 EETAIAATKAQI--------SSLENAIKGLKNKLGILNNSIKEIKNQITYAKITSPIDGI 216

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
           I   +  +  + A   +PL KI   +   YI  ++ 
Sbjct: 217 IAE-RFINEGDMAMPGKPLFKIS-SNNNLYIETRIP 250


>gi|209919538|ref|YP_002293622.1| multidrug efflux system subunit MdtA [Escherichia coli SE11]
 gi|209912797|dbj|BAG77871.1| conserved hypothetical protein [Escherichia coli SE11]
          Length = 464

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 113 AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 170

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 226

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 227 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 259



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 230

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 231 DEASVASAQLQLD 243


>gi|116253345|ref|YP_769183.1| efflux RND transporter protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115257993|emb|CAK09091.1| putative efflux RND transporter protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 432

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 83/250 (33%), Gaps = 21/250 (8%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +L       +T   + +  +  V    KM++ R   +    +  E  +  L++ L + Q 
Sbjct: 93  VLTGPATLDATRISLVSSRLQGVIA--KMRVDRNDRVEQGEIIAEIITDDLKSELGASQA 150

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +               DL   +R   ++ L       ++K ML        E+      
Sbjct: 151 SVEAAHK--------AVDLAIADRKHAEAALANARQNFDRKKMLLEKTIASQESYDAAVA 202

Query: 258 YLKEISRD-------LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
            L++   D       +EQ +   A   +   +     E+ TI +P  G ++  +     +
Sbjct: 203 TLRQAEADFDRSKAAIEQARALEASAAATAEVQRVKLEEGTIHAPFDGVVIS-RDHYVGD 261

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                  ++++V  +    + A+     I  +  G  A +RF      R     A + +I
Sbjct: 262 TITPGSEIVQLV-DTASIILSARFDESSISRLSPGQKAVIRFN--GGGRGASIMATVHRI 318

Query: 371 DPIISQQDNN 380
              +  +   
Sbjct: 319 GRQVDTETRE 328


>gi|126440412|ref|YP_001058665.1| HlyD family secretion protein [Burkholderia pseudomallei 668]
 gi|126219905|gb|ABN83411.1| HlyD family secretion protein [Burkholderia pseudomallei 668]
          Length = 395

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/191 (9%), Positives = 61/191 (31%), Gaps = 3/191 (1%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  + ++ ++ ++G   W          +       + N + I    SG +
Sbjct: 49  ERKRPGKKPLVVLAIIVVLLLVGAFVW-WFATRNQVSTDDAY--TDGNAITIAPKVSGYV 105

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               +++ + + +G  LL  +  +    +D  +  +   +  +D  +  LD  + ++   
Sbjct: 106 VALAIDDNAYVHRGDLLLVIDQRDYQAQVDAARAQLGLAQAQLDAAQVQLDIAHVQFPAQ 165

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +  +++ E       +  +   +       +  +         R      +      + 
Sbjct: 166 YRQAQAQIEAAQASFRQALAAYERQHAVDARATSQQAIDVADAQRLTADANVATARAQAR 225

Query: 188 LRALLSSHQKD 198
             +L+    + 
Sbjct: 226 TASLVPQQIRQ 236


>gi|332259365|ref|XP_003278758.1| PREDICTED: mitotic spindle assembly checkpoint protein MAD1-like
           [Nomascus leucogenys]
          Length = 1272

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 73/207 (35%), Gaps = 6/207 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +D     ++     +      ++ L  +   L+ +   +E ++     +      
Sbjct: 205 QCQQNLDAASKRLREKEDSLAQAGETINALKGRISELQWSVMDQEMRVKRLESEKQELQE 264

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++         +    K+  +++    R D E +   L   LS  ++D  ++KN+ +   
Sbjct: 265 QLDLQHKK--CQEANQKIQELQASQEARADHEQQIKDLEQKLSLQEQDAAIVKNM-KSEL 321

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V    L ++ + + + +  LRE       +   +  L  +  L     ++E    LE   
Sbjct: 322 VRLPRLERELKQLREESARLREMRETNGLLQEELEGL--QRKLGRQEKMQETLVGLELEN 379

Query: 271 RTFADEMSKLTILEKTREQKTILSPIA 297
                ++     L++T    +I +P  
Sbjct: 380 ERLLAKLQSWERLDQTTG-LSIRTPED 405



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 72/205 (35%), Gaps = 25/205 (12%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  ++ + + R  ++ E++A     N     E+  +  +E L         T  +     
Sbjct: 142 EKMQMELSHKRARVELERAASTSARN----YEREVDRNQELL---------TRIRQLQER 188

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK----NLFEKNAVS 212
            +     ++ +L R R    N      +       L+   + +  +K     L       
Sbjct: 189 EAGAEEKMQEQLERNRQCQQNLDAASKRLREKEDSLAQAGETINALKGRISELQWSVMDQ 248

Query: 213 QNDLNQQ--ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +  + +   E+   +  L+L+    ++ N      +   EA  +    +K++ + L   +
Sbjct: 249 EMRVKRLESEKQELQEQLDLQHKKCQEANQKIQELQASQEARADHEQQIKDLEQKLSLQE 308

Query: 271 RTFA------DEMSKLTILEKTREQ 289
           +  A       E+ +L  LE+  +Q
Sbjct: 309 QDAAIVKNMKSELVRLPRLERELKQ 333


>gi|311108097|ref|YP_003980950.1| GAF domain-containing protein 1 [Achromobacter xylosoxidans A8]
 gi|310762786|gb|ADP18235.1| GAF domain protein 1 [Achromobacter xylosoxidans A8]
          Length = 607

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 68/216 (31%), Gaps = 17/216 (7%)

Query: 208 KNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              +S+       +     +   L     E + +     E+      E A+   + S   
Sbjct: 383 DGYISEATRRAGDQVKQGDTLAALDTRETELELLRAGNLEVQYRRQAEEASARGD-SAAS 441

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV-YNQSFSSSNYAQQSQPLMKIVPHS 325
              Q      ++++    +  ++ T+ +P  GTIV  + S       ++ Q L K+ P  
Sbjct: 442 AIAQAQARQALAQMQFHREQIQRSTLRAPFDGTIVSGDLSQQLGEAVKRGQELFKLSPPD 501

Query: 326 K-LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
               ++   V  + I  V  G T  V      D +       + +I P+   Q+     +
Sbjct: 502 GYRLWLD--VEDRLIDDVAVGQTGRVALAAMPDRQIPF---TVTRIVPLAQVQE----GK 552

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
             + +   + + A       LR G            
Sbjct: 553 TVFRLEASLDEKAAQ----ALRPGMEGVGRIDIDER 584


>gi|302389626|ref|YP_003825447.1| chromosome segregation protein SMC [Thermosediminibacter oceani DSM
           16646]
 gi|302200254|gb|ADL07824.1| chromosome segregation protein SMC [Thermosediminibacter oceani DSM
           16646]
          Length = 1185

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 88/228 (38%), Gaps = 15/228 (6%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
            G  I  G P +T    + + L   +K   + ++  +   +  +  L ++   LE+A E 
Sbjct: 656 EGEIINPGGP-ITGGSFKKSSLFLSRKREFREIKEKMGIVEEEISALKSRISSLEEAMEK 714

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRS--LKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            +  +       + +  ++       + +   ++ +L R R + L +  +E++   +   
Sbjct: 715 TQRSIETLSQNIYRSNLEIAGLEKEQMEKKGLMEERLERQRLLKLEKKQIESEIEDIDRQ 774

Query: 192 LSSHQKDLTMMKN-----------LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           +   Q+D++ ++            L  + A S+   ++ E  +      L     ++  +
Sbjct: 775 ILKVQEDISSIEEQNAKHQSRVETLQREIAESKKSKDELETEINDLRAVLNSLRQQELGL 834

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
              I  L ++   E+    +E+ ++++  +      + K+  L+   E
Sbjct: 835 KYQIQNL-EQNKEEWQKEKRELEQNMDAIREALESTVEKMRELQLRLE 881



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 64/200 (32%), Gaps = 4/200 (2%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL---DFLGKYHST 148
           +   +D   +S    R  I  E + +     +    EK  E     L    D L +  S 
Sbjct: 142 SQGQVDEFLISRPEERRMIFEETAGIMKHRARKREAEKKLEETMANLTRVDDILTEIESQ 201

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              +F+    ++      K  ++  + L  LDLE     L  ++    +    ++ +  K
Sbjct: 202 LEPLFSQREKALEYQRLSKRQKLLEVNLLLLDLERLQEKLAQVVLDLSERSLALEQIRNK 261

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            A     L   +R + K   E      E  N      E+  E   +    LK +  DL  
Sbjct: 262 KADLGARLLHIKRELDKKQEEYERLRGEFFNKTTEKKEIEKEKEWQ-NERLKRLKEDLNI 320

Query: 269 NQRTFADEMSKLTILEKTRE 288
            ++  +    KL        
Sbjct: 321 TEQKLSALNEKLESAGNNLN 340


>gi|288927005|ref|ZP_06420899.1| HlyD family secretion protein [Prevotella buccae D17]
 gi|288336214|gb|EFC74601.1| HlyD family secretion protein [Prevotella buccae D17]
          Length = 329

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 71/217 (32%), Gaps = 12/217 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A +    ++  +G+IG          + ++   GE+   +  V  K P  G I + + + 
Sbjct: 13  AIIGFAAVVVTVGVIGFFV---FGQDDETI--QGEVEVSEYRVSCKLP--GRIVELRAKE 65

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G  L      +  ++   KKV++       +  K   D    K  +       +
Sbjct: 66  GDYVHVGDTLAIL---QIPEIDAQKKVALAAGEA-TEALKDLTDAGARKEQIQAAYQLWQ 121

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +      + +   T  +          +         ++        +++  + R     
Sbjct: 122 QAIAASEIARKTYTRMQNLYNEGVVTGQKRDEAFAAFKATEAQVKAAQSQYDMARNGARE 181

Query: 195 HQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLEL 230
            +K +    +   K+AV   N L ++   V +   E+
Sbjct: 182 QEKRIASKNSQAAKSAVEVVNSLLKETVQVSQVEGEV 218


>gi|260769391|ref|ZP_05878324.1| secretion protein HlyD family protein [Vibrio furnissii CIP 102972]
 gi|260614729|gb|EEX39915.1| secretion protein HlyD family protein [Vibrio furnissii CIP 102972]
          Length = 281

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/228 (11%), Positives = 74/228 (32%), Gaps = 20/228 (8%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLEL--RENIHEQKNMLRHINELYDEANLEFANYLK 260
           + + +   + + D  + +  + + T ++  ++   +      H  +   +  L     ++
Sbjct: 57  QPVTKGELIFRVDDTRYQAKIKELTAQVENKQYSLDLARHQYHRRQQLTDRKLISEETVE 116

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
               + E  Q +     ++L   +   ++  + +P  GT++        NY  Q   ++ 
Sbjct: 117 SARINTELAQASLDIAKAQLHSAQINLDRTQVHAPADGTLINLNLR-EGNYVSQGSSVIS 175

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +V  +   Y+       ++  +K G TA +          +     +  I   I+  + +
Sbjct: 176 LVKANS-FYVTGYFEETKLPLIKVGQTAKISL----MSGGEPLTGSVVSIGKAIADSNTS 230

Query: 381 LQTQEYYEV-----------ILKIT-DLAFSDNNIELRNGFPAEVLFT 416
              Q   +V            + +   L      I +  G    +   
Sbjct: 231 SNGQLLPQVQQTFNWVRLAQRIPVDIKLDPLPEGINISAGMTVSIYLQ 278



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 82/226 (36%), Gaps = 11/226 (4%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +TL+ +I  +    W     +    +  G I  E  V+ +    SG +K+ +V++   + 
Sbjct: 3   LTLVIVIVAVIAGHWVWNHYLYSPWTRDGRIRAE--VITVAPDVSGWVKEVKVKDNQPVT 60

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA---LDFLNNKYDVLEKAFESREE 136
           +G  +   +D      I      ++N +  +D  +        L ++  + E+  ES   
Sbjct: 61  KGELIFRVDDTRYQAKIKELTAQVENKQYSLDLARHQYHRRQQLTDRKLISEETVESARI 120

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR-MRSIYLNRLDLENKSSLLRALLSSH 195
                        +++ +  I+     +       + ++ L   +  ++ S + +L+ ++
Sbjct: 121 NTELAQASLDIAKAQLHSAQINLDRTQVHAPADGTLINLNLREGNYVSQGSSVISLVKAN 180

Query: 196 QKDLTM-----MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              +T         L +    ++  L      +  S + + + I +
Sbjct: 181 SFYVTGYFEETKLPLIKVGQTAKISLMSGGEPLTGSVVSIGKAIAD 226


>gi|295663060|ref|XP_002792083.1| cytoskeleton assembly control protein Sla2 [Paracoccidioides
           brasiliensis Pb01]
 gi|226279258|gb|EEH34824.1| cytoskeleton assembly control protein Sla2 [Paracoccidioides
           brasiliensis Pb01]
          Length = 1074

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 66/203 (32%), Gaps = 7/203 (3%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   +    N R   + ++  L   + +   LE+   ++     +   +      +    
Sbjct: 400 LAELEQENLNARAQYERDQLMLQQYDKRIKDLEEQL-NQLNANFNMQTQSKDDQIRALQE 458

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            +++     +        +    LDL   +  L+   +S Q+ +   + L  +      +
Sbjct: 459 QVNAWRTKYEALAKLYSQLRQEHLDLLQNTKALKLKAASAQEAIDRRERLEREMKTKNLE 518

Query: 216 LNQQERIVYKSTLE----LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           L    R   ++  E       N  E + + R +    + A     +   EIS  L +  R
Sbjct: 519 LADMIRERDRALHEKDRIAGGNREEVEKLKRELRLAIERAENAERSKGSEISTLLSKYNR 578

Query: 272 TFADEMSKLTILEKTREQKTILS 294
             AD    L    KTR    I +
Sbjct: 579 EMADLEEALR--NKTRALDEIRA 599



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 72/201 (35%), Gaps = 18/201 (8%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             +  + + +      +  + ++     ++ + LE+  +++  +L D + +      +  
Sbjct: 475 SQLRQEHLDLLQNTKALKLKAASAQEAIDRRERLEREMKTKNLELADMIRERDRALHE-- 532

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKS--SLLRALLSSHQKDLTMMKNLFEKNAV 211
              I+   R    KL R   + + R +   +S  S +  LLS + +++            
Sbjct: 533 KDRIAGGNREEVEKLKRELRLAIERAENAERSKGSEISTLLSKYNREMA----------- 581

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
              DL +  R   ++  E+R N  E+           DE    + + +++   +LE+ + 
Sbjct: 582 ---DLEEALRNKTRALDEIRANNGEKDEDYEKALLEKDEEVEVYKSGMEQALMELEELKL 638

Query: 272 TFADEMSKLTILEKTREQKTI 292
              D    L          ++
Sbjct: 639 NQGDADRALDTQIDDVLHNSV 659


>gi|195131197|ref|XP_002010037.1| GI15695 [Drosophila mojavensis]
 gi|193908487|gb|EDW07354.1| GI15695 [Drosophila mojavensis]
          Length = 426

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 75/210 (35%), Gaps = 7/210 (3%)

Query: 86  TFEDIETTDLIDLKK-VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           T E +E     + ++  +I+ LR  I   +S            EK  E  EEQ      +
Sbjct: 58  TLELLEALATKNERENTTIQELREKIAQLESEKLEKAEFRRRFEKELELIEEQWRSETNE 117

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                S + +     V ++  ++ +  +S  L     E+  S+    L S   D  +++ 
Sbjct: 118 LVELVSSLQDENKRLVKQTQDLQSSSAQSSGLGASLTESIISMTNNELHSALSDTQVLQR 177

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELR------ENIHEQKNMLRHINELYDEANLEFANY 258
           L E+    +++L Q+ER +     EL       E +   +   R  ++L           
Sbjct: 178 LKEQIYKQRDELKQRERELQDKYSELEHVNIQAERLKASERDTRRRHKLMQAQVKTLCEE 237

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             +    L+   R       +L + EK  E
Sbjct: 238 RADFLAQLQDQCREINQLRKRLGLAEKENE 267


>gi|113866612|ref|YP_725101.1| cation/multidrug efflux system, mebrane-fusion component [Ralstonia
           eutropha H16]
 gi|113525388|emb|CAJ91733.1| Cation/multidrug efflux system, mebrane-fusion component [Ralstonia
           eutropha H16]
          Length = 483

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 46/132 (34%), Gaps = 5/132 (3%)

Query: 35  SILLPIEISVS--SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           + +   ++ V     G +    NV  +++  SG + K   + G  +  G  L   +    
Sbjct: 92  ATVAKRDMDVVLNGLGHVTPVSNV-TVRAQVSGPLLKVLFKEGQMVKAGDVLAEIDPRPF 150

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              +D     +   +  +  + + LD    +  + + +   ++    D L + +    K 
Sbjct: 151 QAALDQAVGQLARDQALL--QNARLDQQRYRTLLGQDSISKQQVDTQDALVRQYEGVVKT 208

Query: 153 FNYGISSVYRSL 164
               +++    L
Sbjct: 209 DQGNVANARLQL 220


>gi|71909440|ref|YP_287027.1| secretion protein HlyD [Dechloromonas aromatica RCB]
 gi|71849061|gb|AAZ48557.1| Secretion protein HlyD [Dechloromonas aromatica RCB]
          Length = 387

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 3/119 (2%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            VEI    SGI+     ++GS + +G  L T +       +   +  +  +   +    S
Sbjct: 70  RVEIHPQVSGILTAVHFKDGSLVKKGELLFTIDPRPFAAEVARAEAQLAAMDARVAYTAS 129

Query: 116 AL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            L   + L  +  +  + F+ ++    +      +  + +    ++  Y  +   +   
Sbjct: 130 DLARGERLLAENAIARRDFDEKQNAAREAKANLQAARAALKVAQLNLEYTRITAPIAGR 188



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 29/101 (28%), Gaps = 6/101 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ + E  +      +     +     R + E     N        E      + +    
Sbjct: 109 EVARAEAQLAAMDARVAYTASDLARGERLLAE-----NAIARRDFDEKQNAAREAKANLQ 163

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              + L + +   E   I +PIAG +   +  +  N     
Sbjct: 164 AARAALKVAQLNLEYTRITAPIAGRVSRAEV-TVGNLVAPG 203


>gi|318606615|emb|CBY28113.1| macrolide-specific efflux protein MacA [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 391

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 83/266 (31%), Gaps = 37/266 (13%)

Query: 182 ENKSSLLRALLSSHQKDLTMM--KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE--Q 237
             K   + A +S   K L +   + + +   V++ D   Q+  +  +   L+  + +   
Sbjct: 49  AQKQVTVGAQVSGQIKALHVTLGQQVEKGQLVAEIDDLTQQNALKDAEEALKNVLAQRAA 108

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ-------- 289
           K   +  N+L  +   +       +  D +  + T     +++  L+    Q        
Sbjct: 109 KEATQKNNQLTYQRQQQILAKGLGVRADFDSAKATLESTQAEIKALDAQIAQAEIAVSTA 168

Query: 290 ------KTILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                   I SPI GT+V             Q +  ++K V       + A+++   +  
Sbjct: 169 KLNLGYTKITSPINGTVVAIPVEEGQTVNAVQSAPTIIK-VAQLDTMTVEAQISEADVVK 227

Query: 342 VKKGYTA--------TVRFPHYADIREKK---FKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           VK G             RF       E                 S   ++  T  YY  +
Sbjct: 228 VKAGMPVYFTILGEPEERFSATLRAIEPAPDSINDKTTTTSSSSSSSSSSTTTAIYYNGL 287

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFT 416
             +     ++ N  LR    A+V   
Sbjct: 288 FDV-----ANPNGALRISMTAQVYIV 308



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 52/153 (33%), Gaps = 17/153 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V + G I  +  V  + +  SG IK   V  G Q+ +G  +   +D+   + +   
Sbjct: 37  LEQTVLADGTIKAQKQV-TVGAQVSGQIKALHVTLGQQVEKGQLVAEIDDLTQQNALKDA 95

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++KN+      +++                  +  QL     +              S
Sbjct: 96  EEALKNVLAQRAAKEA----------------TQKNNQLTYQRQQQILAKGLGVRADFDS 139

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              +L+     ++++       E   S  +  L
Sbjct: 140 AKATLESTQAEIKALDAQIAQAEIAVSTAKLNL 172


>gi|309778792|ref|ZP_07673565.1| multidrug efflux pump BpeE [Ralstonia sp. 5_7_47FAA]
 gi|308922500|gb|EFP68124.1| multidrug efflux pump BpeE [Ralstonia sp. 5_7_47FAA]
          Length = 436

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 43/128 (33%), Gaps = 4/128 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG I      VE++   SG +     ++GS + +G  L T +       +   + ++   
Sbjct: 62  SGRIEAV-QRVEVRPLVSGTVTAVHFKDGSIVKKGDALFTIDPRPYAAEVARTQAALTAA 120

Query: 107 RCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  +    +E      L     +  + FE +E    +         + +    ++  Y  
Sbjct: 121 KSRVAYTTSELDRAQKLVADNAIARREFEEKENAAREAQANLQGAAAALEAAKLNLEYTH 180

Query: 164 LKMKLTRM 171
           +   +   
Sbjct: 181 IVAPVAGR 188



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 7/101 (6%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------YLKEISRDLEQNQRTFA 274
           R         +  +   K+ + +     D A    A+        +E      + Q    
Sbjct: 104 RPYAAEVARTQAALTAAKSRVAYTTSELDRAQKLVADNAIARREFEEKENAAREAQANLQ 163

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
              + L   +   E   I++P+AG +   +  +  N     
Sbjct: 164 GAAAALEAAKLNLEYTHIVAPVAGRVSRAEI-TVGNVVSAG 203


>gi|294625614|ref|ZP_06704238.1| HlyD family secretion protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292600089|gb|EFF44202.1| HlyD family secretion protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 294

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 73/217 (33%), Gaps = 19/217 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V +            +  E +  + + +  +     L D    E A   +    ++++ 
Sbjct: 61  VVDRARYAIALEQARAALAERQATLTQLRREIARDRSLQDLVAAEDAEVRR---SNVQKA 117

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   A   S + + +   ++  + SP  G +   ++    +Y    +P++ ++  +    
Sbjct: 118 QAAVATAQSAVDLAQLNLDRTQVRSPADGRVSD-RTVRVGDYVNAGRPVVAVL-DTGSFR 175

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQD 378
           +       ++Q V  G    V+            ++I   I+           P ++   
Sbjct: 176 VDGYFEETRLQGVHPGQRVDVQLMGEPVTLHGHVQSIAAGIEDRYRSGSAGALPNVTPAF 235

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + ++  +   V + +  +     +++L  G  A V  
Sbjct: 236 DWVRLAQRIPVRIALDRV---PAHVQLIAGRTATVSI 269



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 43/129 (33%), Gaps = 6/129 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV++    SG+++   V +   + +G  L   +       ++  + ++   +  + 
Sbjct: 27  VGADVVQVPPDVSGLVESVAVADNQPVTRGQLLFVVDRARYAIALEQARAALAERQATLT 86

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +  +    +  D++        E             + V     +     L +  T++
Sbjct: 87  QLRREIARDRSLQDLVAA------EDAEVRRSNVQKAQAAVATAQSAVDLAQLNLDRTQV 140

Query: 172 RSIYLNRLD 180
           RS    R+ 
Sbjct: 141 RSPADGRVS 149


>gi|261198338|ref|XP_002625571.1| RNA polymerase Rpb1 C-terminal repeat domain-containing protein
           [Ajellomyces dermatitidis SLH14081]
 gi|239595534|gb|EEQ78115.1| RNA polymerase Rpb1 C-terminal repeat domain-containing protein
           [Ajellomyces dermatitidis SLH14081]
          Length = 1422

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 72/211 (34%), Gaps = 11/211 (5%)

Query: 85  LTFEDIET-----TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
              +  +       + +  K+  +   +  ++T +  L+    + +  ++  E+   +L 
Sbjct: 689 AELDATQAALTAKEEELTSKQEELTARQAELETTQGELETTTGELETTKEELEATRSELE 748

Query: 140 DFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
              GK  +T  ++ +    + +    L+ K   + +        + +    +  L S + 
Sbjct: 749 STKGKLETTQGELESKKGELETTQGELESKKGELETTQGELESKKGELETTQGELESKKG 808

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +L   +   E     + +L   +  +  +  +L + + E K     +     E   +  +
Sbjct: 809 ELETTQGELESK---KGELESTQGELVTTKDDLEQKVKELKAKQEELEAKQSELEAK-QD 864

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            L  + R LE  Q        +L   +   +
Sbjct: 865 ELVALQRGLETTQDELTTTKEELDSKKSELD 895



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 60/204 (29%), Gaps = 8/204 (3%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             +     +        L+  I   +  L  L  K   +E++    +++  +        
Sbjct: 505 QAQMQKTANESAKECSKLKSRISELRLELGGLQEKQKDIEESLADAQKENDELSQLREDL 564

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              + N   +        +    +     +  L N+   L       + +      L  +
Sbjct: 565 QEDIDNLQRAIEDEKEAHEEELAKQREQEKEALVNQKQELEGYFQEIKNEDD---RLAAE 621

Query: 209 NAVSQNDLNQQERIVYKSTLEL-RENIHEQKNMLRHINELYDEANL-EFANYLKEI---S 263
              ++      ER   K+ LE  ++ + E K+ +    E   E+   +      E+    
Sbjct: 622 QLKAREQELTVERDKLKAELETEKQELQEAKDAMAADYEGKLESKQADIDTKQAEVDAKQ 681

Query: 264 RDLEQNQRTFADEMSKLTILEKTR 287
             LE  Q       + LT  E+  
Sbjct: 682 EQLEAKQAELDATQAALTAKEEEL 705


>gi|220933490|ref|YP_002512389.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219994800|gb|ACL71402.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 377

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 83/248 (33%), Gaps = 20/248 (8%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV-SQNDLNQQERIVYKSTLE 229
           +  +Y   ++ E ++ +   L +   +       L  +  V ++ D  +  R   +    
Sbjct: 65  VERVYRGSVESEGRARISARLTAQILQIPHREGALVRRGDVLARLDDEEIRRDAARLEAV 124

Query: 230 LRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                 E+    R      D    NL     L +  + +   +    +  + L ++++  
Sbjct: 125 ADRLEGERATARREAARQEDLFRRNLTPERSLDDARQRVSTLEAQIRENAAALGLVQRRL 184

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
                 +P    +    + S    A   QPL+++V  S L  +  +V     + ++ G T
Sbjct: 185 TYAEERAPFDAQVQRVHA-SEGELAAAGQPLVELVALSSLKAV-VQVPQVDARRLRPGMT 242

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             +  P  + I    + A ++++ P +     N     ++            ++   +R 
Sbjct: 243 VRLEVPALSRI----WPARVDRVYPALDAGSRNATFAAFF-----------PEDADGVRP 287

Query: 408 GFPAEVLF 415
           G   +   
Sbjct: 288 GMAVQAHI 295



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 22/173 (12%), Positives = 59/173 (34%), Gaps = 5/173 (2%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G + +E     I +  +  I +     G+ + +G  L   +D E           ++ + 
Sbjct: 71  GSVESEGRAR-ISARLTAQILQIPHREGALVRRGDVLARLDDEEIRRDA----ARLEAVA 125

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             ++ E++       + + L +   + E  L D   +  +  +++     +      ++ 
Sbjct: 126 DRLEGERATARREAARQEDLFRRNLTPERSLDDARQRVSTLEAQIRENAAALGLVQRRLT 185

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
               R+ +  ++   + S    A       +L  + +L     V Q D  +  
Sbjct: 186 YAEERAPFDAQVQRVHASEGELAAAGQPLVELVALSSLKAVVQVPQVDARRLR 238


>gi|91789346|ref|YP_550298.1| secretion protein HlyD [Polaromonas sp. JS666]
 gi|91698571|gb|ABE45400.1| secretion protein HlyD [Polaromonas sp. JS666]
          Length = 545

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/276 (11%), Positives = 84/276 (30%), Gaps = 36/276 (13%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
              +   +R+  +    L  + S +   ++ +++D   ++       V +  +      V
Sbjct: 130 RIQQNLGVRTATVTEGTLSPQVSAV-GSIAYNERDQATVQA-RATGYVERLHVRATLDRV 187

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            K    +   + +          +      + A+ +    + + Q   +  +++ ++   
Sbjct: 188 AKGQPLVDLYVPDWVAAQEEFLAIKRMQGNDLASLVDGARQRMRQAGMS-DEQIRQVEAS 246

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            +T+ + T+ +P+ G +V   +            L +I       +  A+V   Q   ++
Sbjct: 247 GRTQARITVTAPLGGVVVELMAR-EGMTVMAGTTLFRINGL-STVWANAEVPESQSALLR 304

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
            G     R P         F   ++ I P ++     L+             +  ++   
Sbjct: 305 PGAKVQARSPAAPGTT---FNGKVQAILPEVNPATRTLR-----------ARMELANPGA 350

Query: 404 ELRNGF-----------------PAEVLFTAKNTTL 422
            L  G                  P E +      T+
Sbjct: 351 RLVPGMFVSMQFMDMRAEKALLVPTEAVIQTGKRTV 386



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/210 (11%), Positives = 62/210 (29%), Gaps = 15/210 (7%)

Query: 49  EILNEDNVV---EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT-DLIDLKKVSIK 104
           ++           + +P  G++ +     G  ++ GT L     + T     ++ +    
Sbjct: 242 QVEASGRTQARITVTAPLGGVVVELMAREGMTVMAGTTLFRINGLSTVWANAEVPESQSA 301

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            LR     +  +       ++   +A           L       +      +  ++ S 
Sbjct: 302 LLRPGAKVQARSPAAPGTTFNGKVQAILPEVNPATRTLRARMELANPGARL-VPGMFVS- 359

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL-FEKNAVS------QNDLN 217
            M+   MR+     +  E      +  +    ++    + +  E    +      +  L 
Sbjct: 360 -MQFMDMRAEKALLVPTEAVIQTGKRTVVMLAEENGRFRPVDVEAGIEAGGQTEIKRGLQ 418

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINEL 247
             +R+V  S   +       K +   +NE 
Sbjct: 419 AGQRVVVSSQFLIDSE-ASLKGVEARLNEA 447


>gi|42558934|sp|Q8HZ58|CCHCR_PONPY RecName: Full=Coiled-coil alpha-helical rod protein 1; AltName:
           Full=Alpha-helical coiled-coil rod protein
 gi|23296150|gb|AAN12281.1| HCR [Pongo pygmaeus]
          Length = 782

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 79/205 (38%), Gaps = 5/205 (2%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             + L+   ++  R  +D E      L  +     +     E Q L  + +      +  
Sbjct: 499 ADVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQT 558

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAV 211
              ++S+   L++     +        L  + +  + L   +  +K   +   L E+ + 
Sbjct: 559 QESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETQLREQLSD 618

Query: 212 SQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           ++  LN+  R   K+ + LR+      ++K   + +  L +EA  E    L    ++LE+
Sbjct: 619 TERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELER 678

Query: 269 NQRTFADEMSKLTILEKTREQKTIL 293
           ++      + +  +L + ++Q+ + 
Sbjct: 679 DKNLMLATLQQEGLLSRYKQQRLLT 703



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 62/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E +   L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 85  QALSQQAEVIARQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRTEA- 143

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+   SQ +L + +R+  +    L +   E  + L    E  
Sbjct: 144 -EGLRAALAGAEVIRKNLEEG--SQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGL 200

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 201 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 243


>gi|238789795|ref|ZP_04633577.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Yersinia
           frederiksenii ATCC 33641]
 gi|238722154|gb|EEQ13812.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Yersinia
           frederiksenii ATCC 33641]
          Length = 311

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 70/233 (30%), Gaps = 30/233 (12%)

Query: 204 NLFEKN----AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            L +K      + Q    Q            +    E++        L  +A  +    +
Sbjct: 67  QLVQKGQILLVIDQPRYKQALAEAQADVAYYQTLAAEKQRESGRRQRLGVQALSQ--EEI 124

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            + S  L+  +   A  ++   + +   E+  + +P  G +      +   +  +    +
Sbjct: 125 DQSSNVLQTVRHQLAKAIAVRDLAQLDLERTVVRAPAEGWVTNLNVHA-GEFINRGATAV 183

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-------- 371
            +V      YI A +   +++ VK G+ A +        R       ++ I         
Sbjct: 184 ALV-KKDTFYILAYLEETKLEGVKPGHRAEI--TPLGSNR--ILHGTVDSISAGVTNSSS 238

Query: 372 -------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA 417
                    I      ++  +   V +++ D    D       G  A V+ T 
Sbjct: 239 SIDSKGLATIDNNLEWVRLAQRVPVKIRLDDE---DQQHPYPAGTTATVVITG 288



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 46/146 (31%), Gaps = 6/146 (4%)

Query: 16  SLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            +    L+ ++ I+     W+           + +     +VV I    SG++    V++
Sbjct: 10  RIGITLLVVLLAIVAVFKVWAFYTE----SPWTRDAKFTADVVAIAPDVSGLLTDVPVKD 65

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  LL  +       +   +  +   +  +  EK        +  V   + E  
Sbjct: 66  NQLVQKGQILLVIDQPRYKQALAEAQADVAYYQT-LAAEKQRESGRRQRLGVQALSQEEI 124

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSV 160
           ++         H     +    ++ +
Sbjct: 125 DQSSNVLQTVRHQLAKAIAVRDLAQL 150


>gi|331647727|ref|ZP_08348819.1| multidrug resistance protein MdtA (Multidrug transportermdtA)
           [Escherichia coli M605]
 gi|331043451|gb|EGI15589.1| multidrug resistance protein MdtA (Multidrug transportermdtA)
           [Escherichia coli M605]
          Length = 464

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 113 AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 170

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 226

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 227 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 259



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 230

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 231 DEASVASAQLQLD 243


>gi|330991700|ref|ZP_08315650.1| hypothetical protein SXCC_01606 [Gluconacetobacter sp. SXCC-1]
 gi|329761168|gb|EGG77662.1| hypothetical protein SXCC_01606 [Gluconacetobacter sp. SXCC-1]
          Length = 316

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 72/221 (32%), Gaps = 32/221 (14%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + D+        ++ LE R + +E++  +  +    +E         ++     +Q +  
Sbjct: 86  KVDIATAAVNERRADLEFRTSQYERRQKISGVAVSGEE--------KQQFEAVAQQAEAQ 137

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           +A  ++ L       E+  + S I G +      +  +YA   Q  ++++  +   ++  
Sbjct: 138 YAGALADLKQARINLERTEVRSSINGYVTNLTMRA-GDYANAGQVNIQVI-DADSYWVDG 195

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ------EY 386
                +I  +  G    +    +     +     +E I   I+  +     Q        
Sbjct: 196 YFEETKIHSIAVGEPVRLDLMGF----HEPLFGHVESITRGIASNNAASSIQGLPAVDPV 251

Query: 387 YE---------VILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           Y          V + I  +      + L  G  A V   ++
Sbjct: 252 YTWVRLAQRIPVRVHIDSV---PQGLVLAAGMTATVTVVSE 289



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 55/175 (31%), Gaps = 13/175 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +T+L +  I+ ++ W          + +G++     V  I    SG I   +V++   + 
Sbjct: 15  LTILLVAAIVAIVLWDYYT--ASPWTRNGQV--RAQVANIAPRISGQINDVRVQDNQFVH 70

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN---------NKYDVLEKA 130
           +G  L   +  +    +D+   ++   R  ++   S  +             +    E  
Sbjct: 71  KGDVLYVIDPFDFRVKVDIATAAVNERRADLEFRTSQYERRQKISGVAVSGEEKQQFEAV 130

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            +  E Q    L         +    + S        LT     Y N   +  + 
Sbjct: 131 AQQAEAQYAGALADLKQARINLERTEVRSSINGYVTNLTMRAGDYANAGQVNIQV 185


>gi|325129675|gb|EGC52489.1| chromosome segregation protein SMC [Neisseria meningitidis
           OX99.30304]
          Length = 1161

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 70/204 (34%), Gaps = 11/204 (5%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +     +  +K+ R H+       + L  + + LEK  E+ E        + +     +
Sbjct: 174 KERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAER-YKSLTAQLNRQQDLL 232

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR----ALLSSHQKDLTMMKNLFEK 208
                     +      + +S+   + +   +   L     AL ++ Q     +  L  K
Sbjct: 233 DYAQWQQSLAAADKATEQHQSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNK 292

Query: 209 NAVSQNDLNQQE---RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN---YLKEI 262
             V +  + + E   R        +  +    +  ++ I++   +  ++      Y++E 
Sbjct: 293 RGVLREQIARLEEQIRHQQNLHQRIERDKQAAQAQMQRIHQEQQQIRVQLEENELYVEEK 352

Query: 263 SRDLEQNQRTFADEMSKLTILEKT 286
             +L +     A+   +L  LE+T
Sbjct: 353 QTELAEWAMQVAEHEERLPELEET 376


>gi|315606241|ref|ZP_07881258.1| HlyD family secretion protein [Prevotella buccae ATCC 33574]
 gi|315252063|gb|EFU32035.1| HlyD family secretion protein [Prevotella buccae ATCC 33574]
          Length = 329

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 71/217 (32%), Gaps = 12/217 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A +    ++  +G+IG          + ++   GE+   +  V  K P  G I + + + 
Sbjct: 13  AIIGFAAVVVTVGVIGFFV---FGQDDETI--QGEVEVSEYRVSCKLP--GRIVELRAKE 65

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G  +  G  L      +  ++   KKV++       +  K   D    K  +       +
Sbjct: 66  GDYVHVGDTLAIL---QIPEIDAQKKVALAAGEA-TEALKDLTDAGARKEQIQAAYQLWQ 121

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           +      + +   T  +          +         ++        +++  + R     
Sbjct: 122 QAIAASEIARKTYTRMQNLYNEGVVTGQKRDEAFAAFKATEAQVKAAQSQYDMARNGARE 181

Query: 195 HQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLEL 230
            +K +    +   K+AV   N L ++   V +   E+
Sbjct: 182 QEKRIASKNSQAAKSAVEVVNSLLKETVQVSQVEGEV 218


>gi|15676454|ref|NP_273593.1| AcrA/AcrE family protein [Neisseria meningitidis MC58]
 gi|7225774|gb|AAF40977.1| AcrA/AcrE family protein [Neisseria meningitidis MC58]
          Length = 392

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 56/135 (41%), Gaps = 2/135 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IK   V+ G Q+ +G  +        T+ ++ +
Sbjct: 43  ISRTVSATGEISPS-NLVSVGAQASGQIKILYVKLGQQVKKGDLIAEINSTSQTNTLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFNYGIS 158
           K  ++  +  + + + AL     KY      ++       D    +     +K     + 
Sbjct: 102 KSKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELK 161

Query: 159 SVYRSLKMKLTRMRS 173
           ++ R  K+ +    S
Sbjct: 162 ALIRQSKISINTAES 176



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 79/262 (30%), Gaps = 29/262 (11%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  + +    I   +L  + K   L A ++S  +  T+           ++ L   +  
Sbjct: 60  SVGAQASGQIKILYVKLGQQVKKGDLIAEINSTSQTNTLNTE--------KSKLETYQAK 111

Query: 223 VYKSTLELRENIHEQKNMLR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +  + + L     + K        N    E      +       ++ + +         +
Sbjct: 112 LVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAELKALIRQSKISI 171

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQ 338
              E       I + + GT+V             +Q    IV  +   +   + ++    
Sbjct: 172 NTAESELGYTRITATMDGTVVAILV-EEGQTVNAAQSTPTIVQLANLDMMLNKMQIAEGD 230

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVI 390
           I  VK G    + F   ++      KA ++ +DP ++           +      YY   
Sbjct: 231 ITKVKAGQ--DISFTILSEPDTP-IKAKLDSVDPGLTTMSSGGYNSSTDTASNAVYYYAR 287

Query: 391 LKITDLAFSDNNIELRNGFPAE 412
             +      + + +L  G   +
Sbjct: 288 SFVP-----NPDGKLATGMTTQ 304


>gi|121604586|ref|YP_981915.1| RND family efflux transporter MFP subunit [Polaromonas
           naphthalenivorans CJ2]
 gi|120593555|gb|ABM36994.1| efflux transporter, RND family, MFP subunit [Polaromonas
           naphthalenivorans CJ2]
          Length = 434

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 88/246 (35%), Gaps = 22/246 (8%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---- 228
           S+ + R++    S   R + S   +   +++       ++Q +    +R+     L    
Sbjct: 48  SVEVARVEQARLSDETRTVGSLRSRRGVVLRPEV-SGRITQLNFTDGQRVRKGQLLVQLD 106

Query: 229 -ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +L +   +Q      I +   + N E         R L+++  +     +KL + + T 
Sbjct: 107 DQLPQAQIQQSQAELSIAQANQKRNQELVAQNFISQRSLDESAASLQVAQAKLALAKATA 166

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
            +  I++P  G I   +  +  +Y +    ++ I       Y+  ++  +    V++G  
Sbjct: 167 ARLRIVAPFDG-IAGIRQVNVGDYLKDGADIVNI-EDIDAIYVDFRLPERYQSKVRRGQV 224

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           A +        R     A I+ IDP+I     ++                  +  + LR 
Sbjct: 225 ALLDIDALPGQRY---TAQIQAIDPLIDVNGRSVGI-----------RGCIDNRALTLRP 270

Query: 408 GFPAEV 413
           G  A V
Sbjct: 271 GMFARV 276



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 59/186 (31%), Gaps = 6/186 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
             +     + G +        +  P  SG I +    +G ++ +G  L+  +D      I
Sbjct: 57  ARLSDETRTVGSL--RSRRGVVLRPEVSGRITQLNFTDGQRVRKGQLLVQLDDQLPQAQI 114

Query: 97  DLKKVSIKNLRCHIDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN- 154
              +  +   + +    +  +     ++  + E A   +  Q    L K  +   ++   
Sbjct: 115 QQSQAELSIAQANQKRNQELVAQNFISQRSLDESAASLQVAQAKLALAKATAARLRIVAP 174

Query: 155 -YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
             GI+ + +       +  +  +N  D++      R       K       L + +A+  
Sbjct: 175 FDGIAGIRQVNVGDYLKDGADIVNIEDIDAIYVDFRLPERYQSKVRRGQVALLDIDALPG 234

Query: 214 NDLNQQ 219
                Q
Sbjct: 235 QRYTAQ 240


>gi|331677985|ref|ZP_08378660.1| multidrug resistance protein MdtA (Multidrug transportermdtA)
           [Escherichia coli H591]
 gi|331074445|gb|EGI45765.1| multidrug resistance protein MdtA (Multidrug transportermdtA)
           [Escherichia coli H591]
          Length = 464

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 113 AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 170

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 226

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 227 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 259



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 230

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 231 DEASVASAQLQLD 243


>gi|327281044|ref|XP_003225260.1| PREDICTED: protein Hook homolog 2-like [Anolis carolinensis]
          Length = 724

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 77/193 (39%), Gaps = 7/193 (3%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES-REEQLLDFLGKYHSTCSKVFNYGIS 158
           +   KNL+   D      + L  + DVL +A E  R  Q+         T  +     + 
Sbjct: 387 QFEFKNLKEKFDALMKEKERLIEERDVLREANEELRCAQVQQKFLHQADTMLEEIPSPVD 446

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           ++   +         +    + L++++ +L A   S+++    ++ L E++  +++ L  
Sbjct: 447 NLAAEIMPA-----ELKETIVRLQHENKMLCAQEQSYREQQAELQELLEESNRTKSQLEA 501

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           Q+R+  +   EL+  + E +  L+      ++++L     L+E    L +       +  
Sbjct: 502 QQRLSQQQISELKAQVEELQRALQEQGSKAEDSSL-LKKKLEEHLEKLHEAHAELQKKKE 560

Query: 279 KLTILEKTREQKT 291
            L  LE   +  T
Sbjct: 561 CLDELEPKIDSTT 573


>gi|326797320|ref|YP_004315140.1| secretion protein HlyD [Marinomonas mediterranea MMB-1]
 gi|326548084|gb|ADZ93304.1| secretion protein HlyD family protein [Marinomonas mediterranea
           MMB-1]
          Length = 449

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 68/224 (30%), Gaps = 14/224 (6%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V  N+  +Q ++V K   +      E  +    +         + +   ++    L   
Sbjct: 230 LVKPNEQVKQGQLVAKLDAQALTQELESAHQTYVVTGAELRMAQQQSFIDEQRKATLAIL 289

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
           +       S +  L+    +    +P +G  I  +            +PLM I  +    
Sbjct: 290 EGKLLQAKSDMNYLQDQLRRTEFRAPHSGVAIFDDAGDWLGKPMTLGEPLMTIA-NPDEI 348

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +  ++  + +  +  G +                KA +  ID       +       Y 
Sbjct: 349 ELEVRLPLEDVIGITAGSSVKYFL---DSNPSAPIKAQVRSIDYQARPTQDGQ-----YA 400

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEII-HPIT 431
           + L      F ++N  LR G         + T+L   +   P+T
Sbjct: 401 LHLT---AVFVNDNATLRLGKKGLAKLYGEQTSLFYYVFRKPLT 441



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 38/122 (31%), Gaps = 1/122 (0%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P++ SV +  +I+       +++P  G+I +  V+   Q+ QG  +   +    T  ++ 
Sbjct: 199 PVQQSVIAPADIVP-RQPSVLRAPIEGVISELLVKPNEQVKQGQLVAKLDAQALTQELES 257

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
              +       +   +        +   L        +   D            F    S
Sbjct: 258 AHQTYVVTGAELRMAQQQSFIDEQRKATLAILEGKLLQAKSDMNYLQDQLRRTEFRAPHS 317

Query: 159 SV 160
            V
Sbjct: 318 GV 319


>gi|262171251|ref|ZP_06038929.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           mimicus MB-451]
 gi|261892327|gb|EEY38313.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           mimicus MB-451]
          Length = 364

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 4/168 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L T +  +    ++  ++ +KN        K+  +     
Sbjct: 77  SGRLTDIAVKEGDQVKKGQRLATLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ D   K   T       GI S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEDAKRKLEYTQITAPFDGIISEKVVENFAQVQANQVIMTLQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           DL +    +          +   + + E +A+       Q R      
Sbjct: 197 DLNDLEVAIEIPHRVMISGVRNTRAIAELSAIPGQQFPLQLRTYSTQA 244



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 72/201 (35%), Gaps = 17/201 (8%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + +R+    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 90  QVKKGQRLATLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYD 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I +P  G I   +   +    Q +Q +M +   +    +  ++
Sbjct: 150 LAKNRVEDAKRKLEYTQITAPFDGIISE-KVVENFAQVQANQVIMTLQDLND-LEVAIEI 207

Query: 335 TPK-QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
             +  I  V+    A          +         ++    +Q +++ QT   Y V+L  
Sbjct: 208 PHRVMISGVRN-TRAIAELSAIPGQQFPL------QLRTYSTQANSDSQT---YSVVLGF 257

Query: 394 TDLAFSDNNIELRNGFPAEVL 414
            DL        +  G  A+V+
Sbjct: 258 EDL----KGFRVMPGMSAKVI 274


>gi|226434435|dbj|BAH56385.1| myosin heavy chain [Takifugu rubripes]
          Length = 1938

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 78/212 (36%), Gaps = 8/212 (3%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  E+ + ++ K  S++  +  +  E   L     + + L    + ++    +FL ++  
Sbjct: 1403 DAEESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDNFLAEWKQ 1462

Query: 148  --TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +    G     RSL  +L +M++ Y   LD       ++    + Q++++ +   
Sbjct: 1463 KYEEGQAELEGAQKEARSLSTELFKMKNSYEEALD---HLETMKRENKNLQQEISDLTEQ 1519

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
              +   S ++L + ++ V     E++  + E +  L H         LE      E+ R 
Sbjct: 1520 IGETGKSIHELEKSKKTVETEKSEIQAALEEAEGTLEHEEAKILRVQLELNQIKGEVDRK 1579

Query: 266  LEQNQRTFADEM---SKLTILEKTREQKTILS 294
            L +             ++    ++     + S
Sbjct: 1580 LAEKDEEMEQIKRNSQRVIDSMQSTLDAEVRS 1611



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 73/229 (31%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1210 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKSKGNLEKMCRTLEDQLSELKSKN 1267

Query: 146  HSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                 ++         + +       +L    ++       +   +     L  H ++  
Sbjct: 1268 DENVRQLNDINAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRHVEEEV 1327

Query: 201  MMKNLFEKNAVSQND----LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
              KN       S       L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1328 KAKNALAHGVQSARHDCDLLREQYEEEQEAKAELQRAMSKANSEVAQWRSKYETDAIQRT 1387

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   + +  +     + E+      + G +     
Sbjct: 1388 EELEEAKKKLAQRLQDAEESIEAVNSKCASLEKTKQR--LQGEVEDLMI 1434



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 75/225 (33%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTFEDI--ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++  E+   ++ + I  +   I  L   I+ E+S    L  K   L+   
Sbjct: 1060 EGDLKLAQESIMDLENEKQQSDEKIKKRDFEISQLLSKIEDEQSLGAQLQKKIKELQARI 1119

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1120 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1173

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   M ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1174 -----EFQKMRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1228

Query: 252  NLEFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +    +        +LE+  RT  D++S+L        ++
Sbjct: 1229 KMEIDDLSSNMEAVAKSKGNLEKMCRTLEDQLSELKSKNDENVRQ 1273


>gi|159491050|ref|XP_001703486.1| centriole proteome protein [Chlamydomonas reinhardtii]
 gi|158280410|gb|EDP06168.1| centriole proteome protein [Chlamydomonas reinhardtii]
          Length = 3124

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 49/138 (35%), Gaps = 2/138 (1%)

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKS--SLLRALLSSHQKDLTMMKNLFEKNAVS 212
                  + SL+  + ++ S  +   D + +      R       K   +      +    
Sbjct: 1758 QRRPPEHSSLRRLVDQLHSDVVQLQDEQQRQKDEQQRQKQEVWAKMQQLQDEQQRQKDEQ 1817

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            Q   ++ +R   ++  ++++   EQ+   +       +   E      E  R  ++ QR 
Sbjct: 1818 QRQKDELQRQKQEAEAKMQQLEDEQQRQKQEAEAKMQQLEDEQQRQKDEQQRQKDELQRQ 1877

Query: 273  FADEMSKLTILEKTREQK 290
              +  +K+  LE  ++++
Sbjct: 1878 KQEAEAKMQQLEDEQQRQ 1895



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 54/178 (30%), Gaps = 14/178 (7%)

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            QL D   +      +      + + +    +  +       + +L+ +     A +   +
Sbjct: 1780 QLQDEQQRQKDEQQRQKQEVWAKMQQLQDEQQRQKDEQQRQKDELQRQKQEAEAKMQQLE 1839

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             +    K   E    ++    + E+         R+   +Q+     +     EA  +  
Sbjct: 1840 DEQQRQKQEAE----AKMQQLEDEQQ--------RQKDEQQR-QKDELQRQKQEAEAKMQ 1886

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ-KTILSPIAGTIVYNQSFSSSNYAQ 313
                E  R  ++ QR   +   +    E   ++ +   SP +       S + +   +
Sbjct: 1887 QLEDEQQRQKDEQQRQKDELQRQKQEAEAKMQKFRAERSPDSTYADGATSAALAGVVE 1944


>gi|157374754|ref|YP_001473354.1| RND family efflux transporter MFP subunit [Shewanella sediminis
           HAW-EB3]
 gi|157317128|gb|ABV36226.1| efflux transporter, RND family, MFP subunit [Shewanella sediminis
           HAW-EB3]
          Length = 347

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 77/257 (29%), Gaps = 37/257 (14%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           ++L++K   ++A   S Q    ++K  ++ N +     +  E    +   EL     +  
Sbjct: 47  IELDSKLEAVKAATVSAQTSGRIIKLNYDVNDIVSEGASLLEITSKEQGAELAAAEADYA 106

Query: 239 NMLRHINELYDEAN---------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             +   NE   + N               + E   + +  Q       +++    ++ + 
Sbjct: 107 KAIAQDNEAQLQRNRYETLFPKGAISQGTMDEAIANAKSTQEAVRGSKARIIQATESLKY 166

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPL-----MKIVPHSKLTYIRAKVTPKQIQHVKK 344
             + +P +G +               QPL     M            A V  + I  +K 
Sbjct: 167 TEVNAPFSGIVTKRHV-EQGETVSPGQPLFSGFSM------SQMRAIAHVPQRYIDALK- 218

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
                 + P +        +     +         +      Y+V + + +     N   
Sbjct: 219 ------QLPEFKVTLNDGRQFTSNSLTIFSFADPQSHS----YKVRINLPE-----NEPN 263

Query: 405 LRNGFPAEVLFTAKNTT 421
           L  G  A+  F+A   +
Sbjct: 264 LMPGMWAKAKFSAGTRS 280


>gi|149526461|ref|XP_001519671.1| PREDICTED: similar to mKIAA1052 protein, partial [Ornithorhynchus
           anatinus]
          Length = 1267

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 75/209 (35%), Gaps = 20/209 (9%)

Query: 91  ETTDLIDLKKVSIK---NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           + +DL+  K+  ++     +     E+  L     +    E+  + R E LL+ L     
Sbjct: 374 QLSDLLAEKRQGVEKDHERKMERLREEHQLALARIRQQYAEEERQQRTE-LLEGLTGELE 432

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNR--------LDLENKSSLLRALLSSHQKDL 199
              +  +    SV + L  +L  +R  +  +        L+LE ++   RA L+      
Sbjct: 433 QLRRAHHVERESVRQELDGQLDDLRLRHREQEKKLHDLALELETRTKATRASLAQLDVQE 492

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            M++   ++    +  + ++      S+  LRE   EQ  +         EA  E    +
Sbjct: 493 EMVRKKRQQLLEEEKQIAKEREEAAASSRHLREARAEQAAL--------GEATRELRRAV 544

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +E+       +    +   +   L++   
Sbjct: 545 EELRAQRTDLESQVEELQGRSQRLQQRIR 573


>gi|170736225|ref|YP_001777485.1| RND family efflux transporter MFP subunit [Burkholderia cenocepacia
           MC0-3]
 gi|169818413|gb|ACA92995.1| efflux transporter, RND family, MFP subunit [Burkholderia
           cenocepacia MC0-3]
          Length = 489

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 93/308 (30%), Gaps = 31/308 (10%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K+  D  +  +   + A    + QL                     +   +K    R   
Sbjct: 135 KAGNDAASFPFARADGAIALTDAQLATSRIALAKAGPAQIATPF-QLPGEIKFNEDRTAH 193

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMM--KNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +      +  + S+      +  + L ++   +L ++    +++L   ER +  +     
Sbjct: 194 VVPRVAGIVEQVSVSLGQNVAKGQVLAVIASTDLADR----RSELLTAERRLSGA----- 244

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +E++  L       ++   +    L+E    ++  ++  A   + +        +  
Sbjct: 245 RATYERERTLWKERISAEQDYQQAQVQLREAEIAVQNARQKLAALNAPVGAGA--LNRYE 302

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P AGTIV   + +       +   M ++      +    V  +++  V+ G  ATV 
Sbjct: 303 LRAPFAGTIVEKHA-TPGEAI-AADASMFVISDLSTVWAEMAVPAQRLNDVRVGRDATVS 360

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              +              +  ++ +Q                  +   + +   R G   
Sbjct: 361 ATAFESRSSGPIA----YVGSLLGEQTRTA-----------PARVVLPNPDRVWRPGMFV 405

Query: 412 EVLFTAKN 419
            V   A  
Sbjct: 406 NVSVDAGR 413



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 3/101 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLN 121
           GI+++  V  G  + +G  L      +  D       + + L   R   + E++      
Sbjct: 200 GIVEQVSVSLGQNVAKGQVLAVIASTDLADRRSELLTAERRLSGARATYERERTLWKERI 259

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +     ++A     E  +          +     G  ++ R
Sbjct: 260 SAEQDYQQAQVQLREAEIAVQNARQKLAALNAPVGAGALNR 300


>gi|118352893|ref|XP_001009717.1| Leucine Rich Repeat family protein [Tetrahymena thermophila]
 gi|89291484|gb|EAR89472.1| Leucine Rich Repeat family protein [Tetrahymena thermophila SB210]
          Length = 1746

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 82/218 (37%), Gaps = 19/218 (8%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            +  E +     I+  K+ +      I  +++ L  L    + L    + ++++++    +
Sbjct: 1078 IKMESLNLEKQIEEGKIKLDENEMKIKMQQNQLTSLKKHLESLSSLSKQKQQEVISLEKQ 1137

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLSSHQKDLTM-- 201
            Y     ++ +  +         KL   +  Y+  ++ +E   +  R  L   +K +    
Sbjct: 1138 YSDIQQQLLDAELK------IQKLDGQQQYYIEEMNKIEKSRTEKRKDLQILEKQVHDKD 1191

Query: 202  ---------MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
                     ++++ ++  V Q +L +  +       + +  + E  N L+ + E  +E  
Sbjct: 1192 LELQSISLKLEHVKQEYEVKQKELQEIRQTYQLDEKKFKSLMEENHNTLQQLRETIEERE 1251

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             ++ N L +    LE  ++   D +  L      RE +
Sbjct: 1252 QQYYN-LSKKREQLENTEKQKQDNLQNLISSSNEREHQ 1288



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 77/212 (36%), Gaps = 5/212 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++ +   L++    +++ LR  I+  +     L+ K + LE   + +++ L + +   
Sbjct: 1223 QLDEKKFKSLMEENHNTLQQLRETIEEREQQYYNLSKKREQLENTEKQKQDNLQNLISSS 1282

Query: 146  HSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +    +  + N  + S+     +   R++ +   +  L + +++L          +  ++
Sbjct: 1283 NEREHQLKILNQQVDSMSEEQNLLANRLQELSSIQSKLIDDNTILEERRQELNDQVNDLE 1342

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLK 260
               E+    Q D+ ++ + + K    +  N       L    +L  E  +E         
Sbjct: 1343 QYAEELKDEQKDILERIKTLTKKEETIYINKAFSGEELDKDIQLKIEQIIESYYANQNKD 1402

Query: 261  EISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            E    L +  +    E      +  ++  + I
Sbjct: 1403 EEIEQLNKQIKQLKLESENYKNILNSKNHQII 1434


>gi|9971579|dbj|BAB12571.1| myosin heavy chain [Pennahia argentata]
          Length = 1930

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 83/214 (38%), Gaps = 12/214 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLG 143
            +  E  + ++ K  S++  +  + +E   L    +  N     L+K   + ++ L ++  
Sbjct: 1394 DAEEQIEAVNSKCASLEKTKQRLQSEVEDLMIDVERANGLAANLDKKQRNFDKVLAEWKQ 1453

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY    +++   G     RSL  +L +M++ Y   LD   +   ++    + Q++++ + 
Sbjct: 1454 KYEEGQAEL--EGAQKEARSLGTELFKMKNSYEESLD---QLETMKRENKNLQQEISDLT 1508

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                +   S ++L + ++ V     E++  + E +  L H         LE      E+ 
Sbjct: 1509 EQIGETGKSIHELEKAKKQVETEKSEIQTALEEAEGTLEHEESKILRVQLELNQVKGEVD 1568

Query: 264  RDLEQNQRTFADEM---SKLTILEKTREQKTILS 294
            R L +             ++    ++     + S
Sbjct: 1569 RKLAEKDEEMEQIKRNSQRVIDSMQSTLDSEVRS 1602



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 76/226 (33%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  +T + +  K   I  L   I+ E+S    L  K   L+   
Sbjct: 1051 EGDLKLAQESIMDLENDKQQTDEKLKKKDFEISQLLSKIEDEQSLGAQLQKKIKELQARI 1110

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L        +++++  K       
Sbjct: 1111 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATASQIEMNKKREA---- 1164

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1165 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1219

Query: 252  NLEFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +       + +   +LE+  RT  D++S+L        ++ 
Sbjct: 1220 KMEIDDLSSNMEAVAKAKGNLEKMCRTLEDQLSELKTKNDENVRQI 1265



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 82/226 (36%), Gaps = 20/226 (8%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREE--QL 138
            L  +  ++   +  +  +++ ++  ++ EKS     +D L++  + + KA  + E+  + 
Sbjct: 1187 LRKKQADSVAELGEQIDNLQRVKQKLEKEKSEYKMEIDDLSSNMEAVAKAKGNLEKMCRT 1246

Query: 139  LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            L+       T +      I+ +       LT          + E   S L     +  + 
Sbjct: 1247 LEDQLSELKTKNDENVRQINDMSGQRARLLTENGEFTRQVEEKEALVSQLTRGKQAFTQQ 1306

Query: 199  LTMMKNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +K   E+   ++N L               +Q     ++  EL+  + +  + +   
Sbjct: 1307 IEELKRQIEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQW 1366

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
               Y+   ++    L+E  + L Q  +   +++  +     + E+ 
Sbjct: 1367 RSKYETDAIQRTEELEEAKKKLAQRLQDAEEQIEAVNSKCASLEKT 1412


>gi|87309418|ref|ZP_01091553.1| HlyD family secretion protein [Blastopirellula marina DSM 3645]
 gi|87287726|gb|EAQ79625.1| HlyD family secretion protein [Blastopirellula marina DSM 3645]
          Length = 426

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/388 (13%), Positives = 113/388 (29%), Gaps = 90/388 (23%)

Query: 36  ILLPIEISVSSSGEILNED----NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           ++ P+E +  SS +             I S  +G + +F  + G  +  G P+       
Sbjct: 28  VIAPLEEAEVSSSQAFVATVMPRREAVIGSAVAGRVSEFYFDEGDAVEAGQPIAQI---- 83

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              L +  K+ I   +  ++   + L+ L N          SREE+L     +  S  ++
Sbjct: 84  ---LTETIKLQIAAAQAELELRTAELEELKNG---------SREEELAQSKAEMMSAKAR 131

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                       L  +  R   +Y  R                                 
Sbjct: 132 ---------KDYLVARRNRTADLYETRR------------------------------VS 152

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S+ + ++       ++            M++                 + +  +LE   +
Sbjct: 153 SKEEYDEAVSAAEAASEAFNAAEAAHGLMVKGPRIEKIAQAQARVQVQEAVVGELEDKLK 212

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS-SSNYAQQSQPLMKIVPHSKLTYI 330
            +                 TI S   G I  ++  +   ++A+Q   ++ +V   +   I
Sbjct: 213 KY-----------------TIRSRFNGYI--SRKHTDVGSWAEQGADMVDVVELDE-VDI 252

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
            A V    + +V  G    +      D     F   +  I P    +         + V 
Sbjct: 253 TAYVAEHHVPYVVLGAEVRIDVSAIPDRI---FTGTVVAIVPQADVRTRT------FPVK 303

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAK 418
           +++T+       + L+ G  A V     
Sbjct: 304 VRVTNEIQHGVPL-LKAGMLARVQLPTG 330


>gi|153950248|ref|YP_001400291.1| RND efflux transporter [Yersinia pseudotuberculosis IP 31758]
 gi|152961743|gb|ABS49204.1| efflux ABC transporter, RND family, MFP subunit [Yersinia
           pseudotuberculosis IP 31758]
          Length = 401

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 79/256 (30%), Gaps = 28/256 (10%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFE-KNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
              S  ++AL  +  + +   + + E  +   QN L   E  +     +    I  QKN 
Sbjct: 68  AQVSGQIKALHVTLGQQVEKNQLVAEIDDLAQQNALKDAEEALKNVQAQRAAKIATQKNN 127

Query: 241 LR--HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE-------KTREQKT 291
                  +      +        I   LE  Q   +   +++   E              
Sbjct: 128 QLTYQRQQQILAKGVGVRADFDSIKAILEATQAEISALDAQIAQAEIAVSTAKLNLGYTK 187

Query: 292 ILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA- 348
           I SPIAGT+V             Q +  ++K V       + A+++   +  VK G    
Sbjct: 188 ISSPIAGTVVAIPVEEGQTVNAVQSAPTIIK-VAQLDTMTVEAQISEADVVKVKTGMPVY 246

Query: 349 -------TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--YYEVILKITDLAFS 399
                    RF       E    +I ++     S   ++  +    YY  +  + +   +
Sbjct: 247 FTILGEPEKRFSATLRAIEPAPDSINDETTTTSSSTSSSSSSSTAIYYNGLFDVANPTGA 306

Query: 400 DNNIELRNGFPAEVLF 415
                LR    A+V  
Sbjct: 307 -----LRISMTAQVYI 317



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 17/153 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V + G I  +  V  + +  SG IK   V  G Q+ +   +   +D+   + +   
Sbjct: 48  LEQTVLADGTIKAQKQV-TVGAQVSGQIKALHVTLGQQVEKNQLVAEIDDLAQQNALKDA 106

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++KN++                     K    +  QL     +              S
Sbjct: 107 EEALKNVQAQRAA----------------KIATQKNNQLTYQRQQQILAKGVGVRADFDS 150

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
           +   L+     + ++       E   S  +  L
Sbjct: 151 IKAILEATQAEISALDAQIAQAEIAVSTAKLNL 183


>gi|306843307|ref|ZP_07475914.1| HlyD family secretion protein [Brucella sp. BO2]
 gi|306286501|gb|EFM58089.1| HlyD family secretion protein [Brucella sp. BO2]
          Length = 355

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQHRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLVRSRQLSESRTVSQQ 152


>gi|242017022|ref|XP_002428992.1| hypothetical protein Phum_PHUM414140 [Pediculus humanus corporis]
 gi|212513838|gb|EEB16254.1| hypothetical protein Phum_PHUM414140 [Pediculus humanus corporis]
          Length = 3419

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 75/194 (38%), Gaps = 4/194 (2%)

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           ++   K L+   + E      L  + +  EK  + R+ +L +   K      ++    + 
Sbjct: 561 QRDQQKYLQQQKEQELREQYALKKEIEEQEKLNQQRQRELEE---KKLQRQRELEEQRLL 617

Query: 159 SVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
              +  +++  R+  +   +  + E      +      Q+ L  +K + EK  + Q   +
Sbjct: 618 QEKKQKELEEQRLLQLQQEKEAEQERLLQEQQQRELEEQRRLQRLKEVEEKRLLLQRQRD 677

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q+E+ + +   + ++   E + + +   +  +E  L     L+E      Q Q    ++ 
Sbjct: 678 QEEKRLLRYQQQQQKEREELRLLQQKQQKEAEEQRLLQQQKLEEKRLLQLQKQAELDEQN 737

Query: 278 SKLTILEKTREQKT 291
           ++L   +K   +K 
Sbjct: 738 NRLLQEQKAEREKN 751



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 45/125 (36%), Gaps = 4/125 (3%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           +           +K+F    +   +S +    + +   L +   + +  L +      ++
Sbjct: 519 IQKQENDNQFNRNKLFYQQQNQEIQSNRNVNLQNQQELLLQKQRDQQKYLQQQKEQELRE 578

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
              + K + E+  ++Q      +R + +  L+ +  + EQ+ +     +  +E  L    
Sbjct: 579 QYALKKEIEEQEKLNQQR----QRELEEKKLQRQRELEEQRLLQEKKQKELEEQRLLQLQ 634

Query: 258 YLKEI 262
             KE 
Sbjct: 635 QEKEA 639



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 60/162 (37%), Gaps = 5/162 (3%)

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR-MRSIYLNRL 179
           +N+++  +  ++ + +++            ++         + L+ +  + +R  Y  + 
Sbjct: 525 DNQFNRNKLFYQQQNQEIQSNRNVNLQNQQELLLQKQRDQQKYLQQQKEQELREQYALKK 584

Query: 180 DLENKSSLLRA-LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           ++E +  L +       +K L   + L E+  + +    + E    +  L+L++    ++
Sbjct: 585 EIEEQEKLNQQRQRELEEKKLQRQRELEEQRLLQEKKQKELE---EQRLLQLQQEKEAEQ 641

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             L    +  +         LKE+       QR    E  +L
Sbjct: 642 ERLLQEQQQRELEEQRRLQRLKEVEEKRLLLQRQRDQEEKRL 683


>gi|209523174|ref|ZP_03271730.1| GUN4 domain protein [Arthrospira maxima CS-328]
 gi|209496325|gb|EDZ96624.1| GUN4 domain protein [Arthrospira maxima CS-328]
          Length = 525

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 67/209 (32%), Gaps = 10/209 (4%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            Q   L   E  +   +        + +   +    S    + ++     +A  S+    
Sbjct: 119 SQSQLLSRLES-QVKAIASQLPSQSQAIASQLP---SQSQAIASQLPSQSQAIASQLPSQ 174

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              +     + S+     + S  + +  +L        ++  L+++S ++ + L S  + 
Sbjct: 175 SQAIASQLQSQSQAIASQLQSQSQVIASQLQSQSQAIASQ--LQSQSQVIASQLQSQSQV 232

Query: 199 LTMMKNLFEKNAVSQNDLN-QQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLE 254
           +        +   SQ+ L  + E  V     +L    + I  Q  +L  +         +
Sbjct: 233 IASQLQSQSQAIASQSQLLSRLESQVEAIAFQLPSQSQAIASQSQLLSRLESQSQAIASQ 292

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +  + I+  L    +  A ++   +  
Sbjct: 293 LPSQSQAIASQLPSQSQAIASQLPSQSQA 321


>gi|209694881|ref|YP_002262809.1| organic solvent efflux pump precursor (periplasmic linker protein
           component) [Aliivibrio salmonicida LFI1238]
 gi|208008832|emb|CAQ79037.1| organic solvent efflux pump precursor (periplasmic linker protein
           component) [Aliivibrio salmonicida LFI1238]
          Length = 359

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 37/123 (30%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK+  V +G  +  G  L   +  +    +D  +             K  +D     
Sbjct: 66  SGEIKELNVRSGETVKAGQVLAILDKTDYNIDVDNARARYNVANSQYRRSKPLVDKGLLA 125

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               ++    R+  L D                I  +   + ++      +     ++ N
Sbjct: 126 KSQFDELAAQRQIALADLELAKLRLSFTELKAPIDGIISRVSVEQFENIQVGQQIFNIHN 185

Query: 184 KSS 186
           +S+
Sbjct: 186 RSA 188


>gi|171060384|ref|YP_001792733.1| RND family efflux transporter MFP subunit [Leptothrix cholodnii
           SP-6]
 gi|170777829|gb|ACB35968.1| efflux transporter, RND family, MFP subunit [Leptothrix cholodnii
           SP-6]
          Length = 408

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 63/185 (34%), Gaps = 6/185 (3%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           +++S  +GI++K     GS +  G  L   +       +D           ++   +S L
Sbjct: 79  QVRSRVAGIVQKRLFTEGSDVKAGQSLFQLDAASFQAQLDSALAVQAKAEANLAQAQSTL 138

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           D    +   L  A    +++ +          + +     +     L ++   +R+    
Sbjct: 139 D----RNQPLAAAKVISQQEWVLNQTALKQAQADLATARAAVQTARLNVEYAAVRAPIGG 194

Query: 178 RLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
            +   L  + +L+    ++    +     L+     S N++ +  R +   +L+      
Sbjct: 195 HIGRALVTEGALVGQGEATLMATIQQTDPLYVNFTQSANEVLRLRRAIEGGSLKKLGKDG 254

Query: 236 EQKNM 240
            ++  
Sbjct: 255 GRQAA 259



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 49/162 (30%), Gaps = 11/162 (6%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            +L  +    R      +    + K LF + +  +   +  +        +L   +  Q 
Sbjct: 66  TELPGRLEAWRTAQVRSRVAGIVQKRLFTEGSDVKAGQSLFQLDAASFQAQLDSALAVQA 125

Query: 239 NMLRHINELYDE-------ANLEFANYLKEISRD--LEQNQRTFADEMSKLTILEKTREQ 289
               ++ +           A  +  +  + +     L+Q Q   A   + +       E 
Sbjct: 126 KAEANLAQAQSTLDRNQPLAAAKVISQQEWVLNQTALKQAQADLATARAAVQTARLNVEY 185

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYI 330
             + +PI G I      +      Q +  LM  +  +   Y+
Sbjct: 186 AAVRAPIGGHI-GRALVTEGALVGQGEATLMATIQQTDPLYV 226


>gi|163747912|ref|ZP_02155245.1| hypothetical protein OIHEL45_19691 [Oceanibulbus indolifex HEL-45]
 gi|161378820|gb|EDQ03256.1| hypothetical protein OIHEL45_19691 [Oceanibulbus indolifex HEL-45]
          Length = 390

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 63/398 (15%), Positives = 140/398 (35%), Gaps = 51/398 (12%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           +K + L+  I +I +  W I+   E    +S        VV I++  +G +       G+
Sbjct: 1   MKLLRLILSIVLIAVALWVIIA--EQMAGASANAFVNAPVVTIRANTAGDLSLPDTPFGA 58

Query: 77  QILQGTPLLTFED--IETTDLIDLK------KVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           ++ +G  + T +D  ++T  L DL+      +  I  L   +++ +S  D L N+     
Sbjct: 59  RVQKGETIATVDDPLVDTVRLNDLRMEQGFIEGEIARLEADLESTRSLRDSLMNRAATF- 117

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
                RE ++ +   +      ++       +      ++  +     NR+ +E      
Sbjct: 118 -----REARVKELRTRLEHARFRLTVLEGGELPEEADQEVLSLVGELPNRVPME------ 166

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
                        +  L   +A  + ++        K+ + L +  ++  N  +   EL 
Sbjct: 167 -----------PGLAPLILDHARERVEVLAIALETAKAGVFLGDGYNDSPNAEQRATELE 215

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
                +  N L E    LE    T      +  +         I SP+ G I +    + 
Sbjct: 216 T-VISQLENSLGEAQARLE----TLTARSQRENLRVNAAGGGEIASPVNG-IYWEILQAD 269

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q+  P++++V +   T++   VT +    ++ G  A+ R       REK  +  + 
Sbjct: 270 GINVQRGDPILRLV-NCDATFVSLSVTERVFNSLQIGDAASFRLTG----REKVMEGTVA 324

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           ++               Y  + +  ++      ++ L 
Sbjct: 325 RLA-------GAGAATIYQNLAVAPSEKHLERYDVALL 355


>gi|123469906|ref|XP_001318162.1| viral A-type inclusion protein [Trichomonas vaginalis G3]
 gi|121900914|gb|EAY05939.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3]
          Length = 5296

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 69/217 (31%), Gaps = 15/217 (6%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            +  E  ET   ++  +     ++  ++  +     L N+    EK  +  EE   +   +
Sbjct: 3502 VEQEKSETQKKLEEAEQQKNEIQNKLEQTEQEKKNLENEKAETEKRLQETEEAKKNLANE 3561

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                  K     +  V         ++        +LEN+ +  +  L   ++     + 
Sbjct: 3562 KSEAERK-----LEEVQNEKAETERKLNEAEEANKNLENEKNETQKKLEEAEQQKAETQK 3616

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            L E+   ++ +L  ++    +   E  E      N         +E   E A   ++++ 
Sbjct: 3617 LLEQTEEAKKNLANEKSEAERKLQETEEAKKNLANEKSEAERKLEEVQNEKAETERKLNE 3676

Query: 265  ----------DLEQNQRTFADEMSKLTILEKTREQKT 291
                      +  + Q+   +   +    +K  EQ  
Sbjct: 3677 AEEANKNLENEKNETQKKLEEAEQQKAETQKLLEQTE 3713



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 71/210 (33%), Gaps = 9/210 (4%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +    I  K    K  + +++ EK+    L  + +  +K  E+ + +    L +      
Sbjct: 3833 QEKSDIQKKLDETKQQKVNLENEKAETQKLLEETEEAKKNLENEKAETEKRLQETEEAKK 3892

Query: 151  KVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             + N        +  V         ++        +LEN+ +  +  L   ++     + 
Sbjct: 3893 NLANEKSEAERKLEEVQNEKAETERKLNEAEEANKNLENEKNETQKKLEEAEQQKAETQK 3952

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKE 261
            L E+   ++ +L  ++    K   E  E     +     I +  DE   +     N   E
Sbjct: 3953 LLEQTEEAKKNLENEKSETEKKLQETEEAKKNLEQEKSDIQKKLDETKQQKVNLENEKAE 4012

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              + LE+ +    +  ++    +K  ++  
Sbjct: 4013 TQKLLEETEEAKKNLENEKAETQKKLDEAE 4042



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 68/204 (33%), Gaps = 8/204 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            ET   ++  +      +  ++  + A   L N+    E+  +  EE   +   +      
Sbjct: 3690 ETQKKLEEAEQQKAETQKLLEQTEEAKKNLANEKSEAERKLQETEEAKKNLANEKSEAER 3749

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            K     +  V         ++        +LEN+ +  +  L   ++     + L E+  
Sbjct: 3750 K-----LEEVQNEKAETERKLNEAEEANKNLENEKNETQKKLEEAEQQKAETQKLLEQTE 3804

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEISRDLE 267
             ++ +L  ++    K   E  E     +     I +  DE   +     N   E  + LE
Sbjct: 3805 EAKKNLENEKSETEKKLQETEEAKKNLEQEKSDIQKKLDETKQQKVNLENEKAETQKLLE 3864

Query: 268  QNQRTFADEMSKLTILEKTREQKT 291
            + +    +  ++    EK  ++  
Sbjct: 3865 ETEEAKKNLENEKAETEKRLQETE 3888



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 67/211 (31%), Gaps = 15/211 (7%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            ET   ++  +      +  ++  + A   L N+    E+  +  EE   +   +      
Sbjct: 3599 ETQKKLEEAEQQKAETQKLLEQTEEAKKNLANEKSEAERKLQETEEAKKNLANEKSEAER 3658

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            K     +  V         ++        +LEN+ +  +  L   ++     + L E+  
Sbjct: 3659 K-----LEEVQNEKAETERKLNEAEEANKNLENEKNETQKKLEEAEQQKAETQKLLEQTE 3713

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR------ 264
             ++ +L  ++    +   E  E      N         +E   E A   ++++       
Sbjct: 3714 EAKKNLANEKSEAERKLQETEEAKKNLANEKSEAERKLEEVQNEKAETERKLNEAEEANK 3773

Query: 265  ----DLEQNQRTFADEMSKLTILEKTREQKT 291
                +  + Q+   +   +    +K  EQ  
Sbjct: 3774 NLENEKNETQKKLEEAEQQKAETQKLLEQTE 3804


>gi|117619326|ref|YP_855301.1| macrolide-specific efflux protein MacA [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560733|gb|ABK37681.1| macrolide-specific efflux protein MacA [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 386

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 92/310 (29%), Gaps = 49/310 (15%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +     +     +  +   S   Q+   +   H         G   V      +   ++
Sbjct: 43  RRDLEQSVLADGTLQAQKLVSVGAQVSGQIKALHVALGDEVKQGDLLVEIDDLTQQNALK 102

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                  +++ + +  RA L ++Q      + +  +   SQ D +  E  +  +  +++ 
Sbjct: 103 DAEAALDNVQAQLASRRATLRNNQLAFERQRKVLARGLGSQADYDSAEATLTATRADIQA 162

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              +       ++                                      +       I
Sbjct: 163 LTAQAVQARIAVD------------------------------------TAKVNLGYTRI 186

Query: 293 LSPIAGTIVYNQS---FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           +SP+AGTIV        + +    QS P M  V       + A+++   +  VK G  + 
Sbjct: 187 VSPMAGTIVAIPVEQGQTVNAV--QSTPTMVKVARLDTMTVEAQISEADVIKVKAGLPSY 244

Query: 350 VR-FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--YYEVILKITDLAFSDNNIELR 406
                      + +  AI    D I     ++  T    YY  + ++ + + +     LR
Sbjct: 245 FTVLGAPEQRYQARLHAIEPAPDTINDDATSSSSTSTAVYYHGLFEVANPSGA-----LR 299

Query: 407 NGFPAEVLFT 416
            G  A+V   
Sbjct: 300 IGMTAQVHIV 309



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 51/129 (39%), Gaps = 11/129 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E SV + G +     +V + +  SG IK   V  G ++ QG  L+  +D+   + +   
Sbjct: 46  LEQSVLADGTLQ-AQKLVSVGAQVSGQIKALHVALGDEVKQGDLLVEIDDLTQQNALKDA 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF----------ESREEQLLDFLGKYHSTC 149
           + ++ N++  + + ++ L      ++   K            +S E  L        +  
Sbjct: 105 EAALDNVQAQLASRRATLRNNQLAFERQRKVLARGLGSQADYDSAEATLTATRADIQALT 164

Query: 150 SKVFNYGIS 158
           ++     I+
Sbjct: 165 AQAVQARIA 173


>gi|33862403|ref|NP_893963.1| hypothetical protein PMT0130 [Prochlorococcus marinus str. MIT
           9313]
 gi|33640516|emb|CAE20305.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9313]
          Length = 396

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 55/183 (30%), Gaps = 21/183 (11%)

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q D T++K L +           Q     ++ L L                  D+ N E 
Sbjct: 77  QTDGTVVKILAKDG---------QRVKAGQTILVLDNEQQSAALDSAQSEAKKDQLNAER 127

Query: 256 ANYLKEISRDLEQNQRTFA----DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             +L +      + +  +A        +      T   K + +PI G I         +Y
Sbjct: 128 YEFLYQQGATSAKTRDKYAVQAIQSRDQAKADAATLGYKFVRAPINGLIGDLDKVKLGDY 187

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI--IEK 369
            ++ Q +  IV    + +   ++   Q   V+ G T  V     A            +  
Sbjct: 188 VKKGQTITGIV-DDSMLWTMMQIPATQANQVQLGQTVMV-----ASQTTPPLTGQGSVVF 241

Query: 370 IDP 372
           I P
Sbjct: 242 ISP 244



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 46/120 (38%), Gaps = 4/120 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               V +K    G + K   ++G ++  G  +L  ++ + +  +D  +   K  +  ++ 
Sbjct: 68  STKNVALKPQTDGTVVKILAKDGQRVKAGQTILVLDNEQQSAALDSAQSEAK--KDQLNA 125

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E+   +FL  +     K  +    Q +    +  +  + +    + +    L   L +++
Sbjct: 126 ER--YEFLYQQGATSAKTRDKYAVQAIQSRDQAKADAATLGYKFVRAPINGLIGDLDKVK 183


>gi|320169464|gb|EFW46363.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1541

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 83/236 (35%), Gaps = 16/236 (6%)

Query: 67   IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD- 125
            +++ ++  G++      L    D      +      ++     ++ E  AL  L  +   
Sbjct: 855  VQEAKLREGAEQRLEQQLALDRDGSALAALSDNHAQVQAEMDRLEDELGALKLLTVEQQA 914

Query: 126  ----------VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                       + +A E+++ +  +   + +S    +  +    V R   ++  R+ S  
Sbjct: 915  RHLEAVRAFAAISQALETKQREHAELAYQNNSAQLLLAEWQDELVQRQANVQHVRLESDD 974

Query: 176  LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
              RL  E+     +ALLS+ Q+ +   +   +K      +   Q+R+      E+ E + 
Sbjct: 975  ARRLATEHLEEAQQALLST-QERIESTREALQKIEEESIEAQAQKRVAAARLEEVGELLQ 1033

Query: 236  EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++       N     A    +  L+ +  D  + ++  A  + +    E    Q  
Sbjct: 1034 QRLTE----NARITLALQAQSQLLERVEMDKREAEKALAHTLERHRAAETLAAQAQ 1085



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 66/206 (32%), Gaps = 4/206 (1%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            +  E  +   L       ++  +  + + +  ++        +E+     + Q      +
Sbjct: 968  VRLESDDARRLATEH---LEEAQQALLSTQERIESTREALQKIEEESIEAQAQKRVAAAR 1024

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                  ++    ++   R       + + +    +D       L   L  H+   T+   
Sbjct: 1025 LEE-VGELLQQRLTENARITLALQAQSQLLERVEMDKREAEKALAHTLERHRAAETLAAQ 1083

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
               +    ++ L    R      LEL +   +     R ++    +A LE   + ++  +
Sbjct: 1084 AQAEREQVESTLQILLRQRDSLQLELAQLQEDTARHARILDAARADAQLERTRWEQQRQQ 1143

Query: 265  DLEQNQRTFADEMSKLTILEKTREQK 290
              +Q+Q    +   KL    +  E++
Sbjct: 1144 REQQDQLERQERELKLQRERQEHERQ 1169


>gi|313886964|ref|ZP_07820665.1| putative lipoprotein [Porphyromonas asaccharolytica PR426713P-I]
 gi|332300003|ref|YP_004441924.1| hypothetical protein Poras_0811 [Porphyromonas asaccharolytica DSM
           20707]
 gi|312923571|gb|EFR34379.1| putative lipoprotein [Porphyromonas asaccharolytica PR426713P-I]
 gi|332177066|gb|AEE12756.1| hypothetical protein Poras_0811 [Porphyromonas asaccharolytica DSM
           20707]
          Length = 304

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 81/228 (35%), Gaps = 35/228 (15%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
            +   + + L A L +  K+      L  +  V+Q  L++ +  +     ++        
Sbjct: 95  TNAATQVAPLEAQLKALDKERNRYAPLVARGVVAQRTLDEIDAKISAVKGQIAAARATIG 154

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
              R  +   D  +++ +                          +++   +  I +PI+G
Sbjct: 155 QQNRSTSGSGDALSVQESQ-------------------------VDQMISRSFIKAPISG 189

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           T++          A Q  PL ++  + K  Y+RA VT +Q++HV  G   +V +    + 
Sbjct: 190 TVLTVYLH-QGELAGQGMPLFRLA-NLKQMYLRAYVTAEQLEHVTLGQEVSV-YSDMGEE 246

Query: 359 REKKFKAIIEKIDPIISQ------QDNNLQTQEYYEVILKITDLAFSD 400
             + +   +  I    ++      Q  + +    Y + +++ +     
Sbjct: 247 EAQAYTGEVVWIS-DRAEFTPKNIQTPDARASLIYAIKIRVPNDGKLR 293



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 76/222 (34%), Gaps = 16/222 (7%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI---ETTDLIDLKKVS 102
           + G    E+  + + +  SG + +  V  G Q+ +G  +   +        DL+D ++ +
Sbjct: 31  AQGIFEAEE--IVVSAVTSGELLRLDVSEGDQLEEGQVVGLIDTTFLALQKDLVDTQQAT 88

Query: 103 IKN--------LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           I              ++ +  ALD   N+Y  L       +  L +   K  +   ++  
Sbjct: 89  INAAGHTNAATQVAPLEAQLKALDKERNRYAPLVARGVVAQRTLDEIDAKISAVKGQIAA 148

Query: 155 YG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               I    RS       + S+  +++D     S ++A +S     + + +       + 
Sbjct: 149 ARATIGQQNRSTSGSGDAL-SVQESQVDQMISRSFIKAPISGTVLTVYLHQGELAGQGMP 207

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
              L   +++  ++ +   +  H        +     E   +
Sbjct: 208 LFRLANLKQMYLRAYVTAEQLEHVTLGQEVSVYSDMGEEEAQ 249


>gi|295136168|ref|YP_003586844.1| multidrug resistance protein, AcrA/AcrE family protein
           [Zunongwangia profunda SM-A87]
 gi|294984183|gb|ADF54648.1| multidrug resistance protein, AcrA/AcrE family protein
           [Zunongwangia profunda SM-A87]
          Length = 384

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 3/117 (2%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           VEI+    GI+++  V+ G  + +G PL         +       ++   R  ++  KS 
Sbjct: 66  VEIRPQVDGILEEIYVDEGDFVEKGQPLFKVNSQPYMEDYKNAMANVALERAKVEKAKSD 125

Query: 117 LDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           LD L    D   + E   +S E      L       ++  N  I+  + ++K  ++ 
Sbjct: 126 LDRLQPLIDNEVISEVRKKSVEADYQVALSSLERAQAQAANMRINLNFTTIKAPVSG 182


>gi|258645294|ref|ZP_05732763.1| efflux transporter, RND family, MFP subunit [Dialister invisus DSM
           15470]
 gi|260402644|gb|EEW96191.1| efflux transporter, RND family, MFP subunit [Dialister invisus DSM
           15470]
          Length = 362

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 67/221 (30%), Gaps = 25/221 (11%)

Query: 210 AVSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            V QN+ + + + +    +  L   + + KN L +    Y+  N  +          ++ 
Sbjct: 75  YVKQNETVTKGQILATIESKSLTSTMEQAKNTLENKRSYYNRLNSLYEQGAVAYQT-MDD 133

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL-------MKI 321
            + ++ +  +  T  +       I SP+ G I            Q+ + +       M I
Sbjct: 134 ARLSYLNAQAAYTKAQADVNDTVITSPLDGVI-------IGEPMQEGETVSQGLSSQMVI 186

Query: 322 VPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
           V  +      I   V    I  V  G   +     Y              +  I  ++ +
Sbjct: 187 VTVADLSAMKIELLVDETDIGEVAIGQIVSFTVDAYPGRIF------HGTVSDISKKEYS 240

Query: 380 NLQTQEYYEVILKITDLAFSDNNIE-LRNGFPAEVLFTAKN 419
           +  T     V+     ++ + + +  L     A      + 
Sbjct: 241 SSSTSSSSSVVYYTVYVSINADELSGLYPSMTARAEIMGRE 281



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 51/138 (36%), Gaps = 1/138 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I + V ++G I   ++V  + +  SG ++   V+    + +G  L T E    T  ++  
Sbjct: 45  IGMIVDATGTIKPVNSVK-LSATASGTLEHVYVKQNETVTKGQILATIESKSLTSTMEQA 103

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K +++N R + +   S  +     Y  ++ A  S       +          V    +  
Sbjct: 104 KNTLENKRSYYNRLNSLYEQGAVAYQTMDDARLSYLNAQAAYTKAQADVNDTVITSPLDG 163

Query: 160 VYRSLKMKLTRMRSIYLN 177
           V     M+     S  L+
Sbjct: 164 VIIGEPMQEGETVSQGLS 181


>gi|224826362|ref|ZP_03699464.1| efflux transporter, RND family, MFP subunit [Lutiella nitroferrum
           2002]
 gi|224601463|gb|EEG07644.1| efflux transporter, RND family, MFP subunit [Lutiella nitroferrum
           2002]
          Length = 424

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 55/190 (28%), Gaps = 15/190 (7%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             + + + +         E     A + + +  D   ++ T     + L        +  
Sbjct: 148 GRLRQVQQVSGGKVPSQSEMETALATFERAV-ADAANSRATVTQGEATLEAQRTDLAKAV 206

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
           I SP+ G ++   +      A   Q   L  +        +   V    +  V++G  A+
Sbjct: 207 IRSPVDGVVLKRAAEPGQTVAASFQTPVLFTLAEDLTQMELHVDVDEADVGKVREGQAAS 266

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
                Y +           ++  +       +     YE +LK+      +  + LR G 
Sbjct: 267 FTVDAYPERTFPA------RLSQVRFGA-KTVAGVVTYETVLKVD-----NAGLLLRPGM 314

Query: 410 PAEVLFTAKN 419
                   + 
Sbjct: 315 TGTASIVVEQ 324



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           + ++VS++G +   + V ++ S  SG IK  +V+   ++ +G  L   +  +    +   
Sbjct: 64  LTVAVSATGTLQPTNQV-DVGSEISGTIKSVEVDYNDRVKRGQVLARIDTSKLEAQLKQS 122

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             ++   R  +   ++ +           KA   R  Q+    G    + S++    +++
Sbjct: 123 LAALAAARARVQQAQATVSE--------AKAKLGRLRQVQQVSGGKVPSQSEM-ETALAT 173

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             R++        ++      LE + + L   +     D  ++K   E  
Sbjct: 174 FERAVADAANSRATVTQGEATLEAQRTDLAKAVIRSPVDGVVLKRAAEPG 223


>gi|206558597|ref|YP_002229357.1| transporter system transport protein [Burkholderia cenocepacia
           J2315]
 gi|198034634|emb|CAR50501.1| transporter system transport protein [Burkholderia cenocepacia
           J2315]
          Length = 401

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/262 (10%), Positives = 77/262 (29%), Gaps = 37/262 (14%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
             K  +       +  L +   + + +  + +  +   +  +L +  A +Q  +++    
Sbjct: 77  QRKAAVASKGQGRVEWLGVLEGTRVKKDEIIARLESNDVQASLAQ--ARAQVQVSRANFG 134

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           V ++ L+  E    + + L     +           + +    L  +Q       +    
Sbjct: 135 VAQAELKDAEIALRRTSALAPKGAVPAAQLDTDTARVNKARATLASDQAAIVSAEANAQA 194

Query: 283 LEKTREQKTILSPIAGTIVYNQSF-------------SSSNYAQQSQPLMKIVPHSKLTY 329
            +   +Q  I +P  G ++   +              S          +  +        
Sbjct: 195 AQVAVDQTVIRAPFDGIVLAKHANVGDNITPFSSASDSKGAVV----TIADM----DTLE 246

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           + A V    I  ++      ++     D+R   F   + +I P + +    +       V
Sbjct: 247 VEADVAESNIAKIRAEQPCEIQLDALPDMR---FAGRVSRIVPTVDRSKATV------LV 297

Query: 390 ILKITDLAFSDNNIELRNGFPA 411
            ++     F D +  +     A
Sbjct: 298 KVR-----FVDRDERVLPDMSA 314



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 12/123 (9%), Positives = 42/123 (34%), Gaps = 4/123 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  ++++G ++ +     + S   G ++   V  G+++ +   +   E  +    +   +
Sbjct: 65  DTQLNATGYVVPQRKA-AVASKGQGRVEWLGVLEGTRVKKDEIIARLESNDVQASLAQAR 123

Query: 101 VSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             ++  R +      E    +    +   L         QL     + +   + + +   
Sbjct: 124 AQVQVSRANFGVAQAELKDAEIALRRTSALAPKGAVPAAQLDTDTARVNKARATLASDQA 183

Query: 158 SSV 160
           + V
Sbjct: 184 AIV 186


>gi|153826222|ref|ZP_01978889.1| HlyD family secretion protein [Vibrio cholerae MZO-2]
 gi|149739987|gb|EDM54162.1| HlyD family secretion protein [Vibrio cholerae MZO-2]
          Length = 364

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 55/167 (32%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L + +  +    ++  ++ +KN        K+  +     
Sbjct: 77  SGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYSRAKAIFEKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       G+ S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +    +          +   + + E +A+     + + R     
Sbjct: 197 DLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQ 243



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 80/241 (33%), Gaps = 44/241 (18%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + +    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 90  QVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYSRAKAIFEKTQAISKAELDKVTNRYD 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I +P  G I      + +   Q +Q +M I+       +  ++
Sbjct: 150 LAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQV-QANQVIM-ILQDLNDLEVAIEI 207

Query: 335 T----------PKQIQHVK--KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                       + I  +         ++   Y                   +Q  ++ Q
Sbjct: 208 PHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTY------------------STQPSSDSQ 249

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH-PIT----DNWPKI 437
           T   Y V+L   DL        +  G  A+V+  A N T    +I  P+T    DN  K 
Sbjct: 250 T---YSVVLGFEDL----KGFRVMPGMSAKVIPVADNPTAENTLITLPLTALVPDNQGKQ 302

Query: 438 F 438
           F
Sbjct: 303 F 303


>gi|293349199|ref|XP_001064241.2| PREDICTED: centrosomal protein 164kDa [Rattus norvegicus]
 gi|293361095|ref|XP_343384.4| PREDICTED: centrosomal protein 164kDa [Rattus norvegicus]
 gi|149041532|gb|EDL95373.1| rCG58388, isoform CRA_a [Rattus norvegicus]
 gi|149041533|gb|EDL95374.1| rCG58388, isoform CRA_a [Rattus norvegicus]
          Length = 1341

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 88/235 (37%), Gaps = 29/235 (12%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDT-EKSALDFLNNKYDV--------LEKAFESREE 136
           T +  E   L    + +++ LR  ++  E+SA   L  + +         L +  E    
Sbjct: 590 TLQKAERASLEQKSRRALEQLREQLEAEERSAQAALRAEKEAEKEATLLQLREQLEGERR 649

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           + +  L K HST  +     + + +R +   L +       + + + + SL RA   +HQ
Sbjct: 650 EAVAGLEKKHSTELEQLCSSLEAKHREVISNLQKKIEGAQQKEEAQLQESLGRAEQRTHQ 709

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN----------------- 239
           K   +++   E +++ ++   + ER   +   +++E   ++                   
Sbjct: 710 KVHQVIEYEQELSSLLRDKRQEVEREHERKMDKMKEEHWQEMAEARERYEAEERKQRADL 769

Query: 240 ---MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +   +  L      E  +  +E  + LE  +R   D+  KL  LE     +T
Sbjct: 770 LGHLTGELERLRRAHERELESVRQEQDQQLEDLRRRHRDQERKLQDLEAELSSRT 824



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 60/183 (32%), Gaps = 10/183 (5%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              +     +R   + E        +      +A E   EQL        +         
Sbjct: 573 SSTEAFENQIRLREEAETLQKAERASLEQKSRRALEQLREQLEAEERSAQAALRAEKEAE 632

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
             +    L+ +L   R   +  L+ ++ + L +   S   K   ++ NL +K        
Sbjct: 633 KEATLLQLREQLEGERREAVAGLEKKHSTELEQLCSSLEAKHREVISNLQKK-------- 684

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
              E    K   +L+E++   +           E   E ++ L++  +++E+      D+
Sbjct: 685 --IEGAQQKEEAQLQESLGRAEQRTHQKVHQVIEYEQELSSLLRDKRQEVEREHERKMDK 742

Query: 277 MSK 279
           M +
Sbjct: 743 MKE 745



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 65/200 (32%), Gaps = 15/200 (7%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           IE     +  ++     R    T +     +  + ++     + R+E   +   K     
Sbjct: 685 IEGAQQKEEAQLQESLGRAEQRTHQKVHQVIEYEQELSSLLRDKRQEVEREHERKMDKMK 744

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + +     +  R    +  +   +  +          L  L  +H+++L  ++   ++ 
Sbjct: 745 EEHWQEMAEARERYEAEERKQRADLLGHLTG------ELERLRRAHERELESVRQEQDQQ 798

Query: 210 AVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
               +     QER +     EL     + K  L  +N       ++  N  KE  + L  
Sbjct: 799 LEDLRRRHRDQERKLQDLEAELSSRTKDVKARLAQLN-------VQEENMRKE-KQLLLD 850

Query: 269 NQRTFADEMSKLTILEKTRE 288
            QR  A E  + T   +  E
Sbjct: 851 AQRQAALEKEEATATRRHLE 870


>gi|154336505|ref|XP_001564488.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061523|emb|CAM38553.1| hypothetical protein, unknown function [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 1058

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 75/215 (34%), Gaps = 7/215 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E  +    +  ++   + L   +  +++  + L  +        E    +L +   + 
Sbjct: 89  RAEAEKLAAELVEQRAEAEKLAAELVEQRAEAEKLAAELVEQRAEAEKLAAELEEQRAEA 148

Query: 146 HSTCSKVFNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               +++      +  +   L+ K      +    ++   ++  L A +   + +   + 
Sbjct: 149 EKLAAELVEQRAEAEKLAAELEEKSAEAEKLAAEVVEQRAEAEKLAAEVVEQRAEAEKLA 208

Query: 204 -NLFEKNAVSQ---NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             L E+ A ++    +L +Q     K   EL E   E + +   + E   EA  + A  +
Sbjct: 209 AELVEQRAEAEKLGAELEEQRAEAEKLAAELEEKSAEAEKLAAEVVEQRAEAE-KLAAEV 267

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E   + E+      ++ ++   L    E++   +
Sbjct: 268 VEKRAEAEKLAAELVEQRAEAGKLAAELEEQRAEA 302



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 67/205 (32%), Gaps = 4/205 (1%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            D +D  K  I  L+  +  ++        + +      E    +L++   +     +++
Sbjct: 40  KDGLDAAKDMITELQVALAAKEEEAAKNAAELEEQRAEAEKLAAELVEQRAEAEKLAAEL 99

Query: 153 FNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKN 209
                 +  +   L  +      +    ++   ++  L A L   + +   +   L E+ 
Sbjct: 100 VEQRAEAEKLAAELVEQRAEAEKLAAELVEQRAEAEKLAAELEEQRAEAEKLAAELVEQR 159

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           A ++    + E    ++  +L   + EQ+     +     E   E      E+     + 
Sbjct: 160 AEAEKLAAELEEKSAEAE-KLAAEVVEQRAEAEKLAAEVVEQRAEAEKLAAELVEQRAEA 218

Query: 270 QRTFADEMSKLTILEKTREQKTILS 294
           ++  A+   +    EK   +    S
Sbjct: 219 EKLGAELEEQRAEAEKLAAELEEKS 243



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 73/204 (35%), Gaps = 10/204 (4%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +    L  +     D    K    + ++  +D   S +  L  + +     +    + 
Sbjct: 728 VQKEMSDLRRDLRAAEDRAAEKSRDTERMKLDLDALNSRIQDLLEELEEKTDQYNQVIKD 787

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L DF         K     + +  + L       R       + E +  +L+  ++  + 
Sbjct: 788 LDDFAKNQSRENEKELLQRLLAREQELFELQEARRG---ENDEHEKQVGVLQGQINRLRD 844

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                  L +     Q++L +  +++  +   LR+ + E + +   I  + DE   +   
Sbjct: 845 QTHQDNALHDG---LQDELARLHKLLADAEAALRDKVAENEALKDGIEGMIDEHEAQ--- 898

Query: 258 YLKEISRDLEQNQRTFADEMSKLT 281
            ++E+ ++LE   +  +D + +L 
Sbjct: 899 -MREMEQELEGKSKEVSDALERLE 921



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/182 (11%), Positives = 59/182 (32%), Gaps = 6/182 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E  +    ++ K    + L   +  +++  + L  +        E    +L++   + 
Sbjct: 159 RAEAEKLAAELEEKSAEAEKLAAEVVEQRAEAEKLAAEVVEQRAEAEKLAAELVEQRAEA 218

Query: 146 HSTCSKVFNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               +++      +  +   L+ K      +    ++   ++  L A +   + +   + 
Sbjct: 219 EKLGAELEEQRAEAEKLAAELEEKSAEAEKLAAEVVEQRAEAEKLAAEVVEKRAEAEKLA 278

Query: 204 -NLFEKNAVS---QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
             L E+ A +     +L +Q     K   EL E   E + +   +     + N       
Sbjct: 279 AELVEQRAEAGKLAAELEEQRAEAEKLAAELVEQRAEAEKLAAEVAAFRAKRNAALEARD 338

Query: 260 KE 261
            +
Sbjct: 339 AD 340


>gi|167644773|ref|YP_001682436.1| RND family efflux transporter MFP subunit [Caulobacter sp. K31]
 gi|167347203|gb|ABZ69938.1| efflux transporter, RND family, MFP subunit [Caulobacter sp. K31]
          Length = 358

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 70/229 (30%), Gaps = 20/229 (8%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
            +E    L+    ++   +L+  +    +    + D  +  + + +    L     +Q+ 
Sbjct: 59  GVEASGLLVSREEAAVGSELSGYR--VARLYADEGDYVRAGQPLAQLDDTLLRAQVDQQA 116

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            +    +       +           +E  +     + + L  L     + TI +P++G 
Sbjct: 117 AVTAQAQAEARRVADLDGQGVLSQEQIETRRYQAKVQEAALKELRTRVSRMTITAPVSGL 176

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I+          A         +    L  + A+V    +  V+ G  A V  P      
Sbjct: 177 ILQRGV-QPGQIAGGGTTPWFTIARDGLVELDAEVNEADLAGVRPGQPAQVALPS----- 230

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            +    ++  + P +             +V +++          +LR G
Sbjct: 231 GQSVSGVVRLVSPRVDSATRLG------KVRVRL------PVGPDLRPG 267



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 44/129 (34%), Gaps = 4/129 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+   V +SG +++ +            + +   + G  +  G PL   +D      +D 
Sbjct: 55  PLGGGVEASGLLVSREEAAVGSELSGYRVARLYADEGDYVRAGQPLAQLDDTLLRAQVDQ 114

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           +             E   +  L+ +  + ++  E+R  Q            ++V    I+
Sbjct: 115 QAAVTAQA----QAEARRVADLDGQGVLSQEQIETRRYQAKVQEAALKELRTRVSRMTIT 170

Query: 159 SVYRSLKMK 167
           +    L ++
Sbjct: 171 APVSGLILQ 179


>gi|329119383|ref|ZP_08248069.1| macrolide-specific efflux protein MacA [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327464528|gb|EGF10827.1| macrolide-specific efflux protein MacA [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 391

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 87/219 (39%), Gaps = 14/219 (6%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  +VS++GEI    N+V + +  SG IKK  V  G QI +G  +        T++++ +
Sbjct: 43  ISQTVSATGEISPS-NLVTVGAQASGQIKKLYVTLGQQIKKGDLVAEINSTTQTNVLNTE 101

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF--ESREEQLLDFLGKYHSTCSKVFNYGI 157
           K  ++  +  + + + AL+    KY      +  E+  ++ L+      +          
Sbjct: 102 KSKLETYQAKLVSAQIALNTAEKKYKREAALWKEEATSKENLESAQDTLAAAKATVAELK 161

Query: 158 SSVYRSLKMKLTRMRSIYLNRLD-----------LENKSSLLRALLSSHQKDLTMMKNLF 206
           +S+ ++     T    +   R+            +E   ++  A  +     L  ++ + 
Sbjct: 162 ASINQTKISINTAESDLGYTRITAPMDGTVVAVPVEEGQTVNAAQSTPTIIQLANLQTML 221

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            K  +++ D+ + +     S   L E  +  K  L  ++
Sbjct: 222 NKMQIAEGDITKVKAGQDISFTILSEPDNPIKAKLESVD 260



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 84/257 (32%), Gaps = 26/257 (10%)

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
               +++ +Y+       K  L+  + S+ Q ++   +        S+ +  Q + +  +
Sbjct: 64  QASGQIKKLYVTLGQQIKKGDLVAEINSTTQTNVLNTEK-------SKLETYQAKLVSAQ 116

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             L   E  ++++  L        E      + L      + + + +       +   E 
Sbjct: 117 IALNTAEKKYKREAALWKEEATSKENLESAQDTLAAAKATVAELKASINQTKISINTAES 176

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVK 343
                 I +P+ GT+V             +Q    I+  +  +    + ++    I  VK
Sbjct: 177 DLGYTRITAPMDGTVVAVPV-EEGQTVNAAQSTPTIIQLANLQTMLNKMQIAEGDITKVK 235

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--------QDNNLQTQEYYEVILKITD 395
            G    + F   ++      KA +E +DP ++           +   +  YY     + +
Sbjct: 236 AGQ--DISFTILSEPDNP-IKAKLESVDPGLTTMSLGSYTSSTDTTSSAIYYYARALVPN 292

Query: 396 LAFSDNNIELRNGFPAE 412
               D  + +  G   +
Sbjct: 293 E---DGKLSI--GMTTQ 304


>gi|325498820|gb|EGC96679.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia fergusonii
           ECD227]
          Length = 310

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 80/236 (33%), Gaps = 33/236 (13%)

Query: 204 NLFEKNAVS--------QNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLE 254
            L +K  V         Q  L + E  V   ++  +E   E     R  +  +  E   +
Sbjct: 67  QLVKKGQVLFTIDQPRYQKALAEAEADVAYYSVLAQEKRQEASRRNRLGVQAMSREEIDQ 126

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N L+ +   L + Q T         + +   E+  I +P  G +     ++   +  +
Sbjct: 127 ANNVLQTVLHQLAKAQATR-------DLAKLDLERTVIRAPADGWVTNLNVYT-GEFITR 178

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               + +V  +   Y+ A +   +++ V+ GY A +        R    K  ++ +   +
Sbjct: 179 GSTAVALVKQN-TFYVLAYMEETKLEGVRPGYRAEI--TPLGSNR--VLKGTVDSVAAGV 233

Query: 375 SQQDNNLQTQEYYEV-----ILKITDLAFSDNNIELRN------GFPAEVLFTAKN 419
           +   +    +    +      +++         ++ +       G  A V+ T K+
Sbjct: 234 TNASSTRDAKGMATIDSNLEWVRLAQRVPVRIRLDAQPENLWPAGTTATVVVTGKD 289



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 45/154 (29%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    +   + L+ +  I     W            + +     +VV I    +G+
Sbjct: 2   KTLIRKLSRTAITLVLVILAFIAIFRAWVYYTE----SPWTRDARFSADVVAIAPDVAGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V +   + +G  L T +       +   +  +      +  EK       N+  V
Sbjct: 58  ITNVNVHDNQLVKKGQVLFTIDQPRYQKALAEAEADV-AYYSVLAQEKRQEASRRNRLGV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVLHQLAKAQATRDLAKL 150


>gi|313668974|ref|YP_004049258.1| hypothetical protein NLA_16940 [Neisseria lactamica ST-640]
 gi|313006436|emb|CBN87899.1| conserved hypothetical protein [Neisseria lactamica 020-06]
          Length = 1161

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHRQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|262379991|ref|ZP_06073146.1| HlyD family secretion protein [Acinetobacter radioresistens SH164]
 gi|262298185|gb|EEY86099.1| HlyD family secretion protein [Acinetobacter radioresistens SH164]
          Length = 329

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 82/253 (32%), Gaps = 12/253 (4%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +    LD+E   S L    +   +    +      +  SQ ++   E+   +    +  
Sbjct: 72  DVARQALDVEQAKSDLAKAKAGLAEAEAALAQSHANSIKSQANIRLAEKNAQRYASLMNG 131

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRD-LEQNQRTFADEMSKLTILEKTREQKT 291
            I +Q+            A  E      + ++  + Q +       S++ + E    +  
Sbjct: 132 AISKQEQDQMFAVRDQARAEHEQMQAAIQQAQATIRQQKALIEAATSQVHLAELNLHRSA 191

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           +++P  GT+         NY +  Q +  +V   +  Y+       ++  +  G  ATV+
Sbjct: 192 VIAPADGTLSNFDMR-PGNYVKSGQAVAALV-DRQQLYVVGYFEETKLDRIHVGDKATVQ 249

Query: 352 FPHYADIREKKFKAIIEKI--------DPIISQQDNNLQTQEYY-EVILKITDLAFSDNN 402
               +       + I   I          +++  +           V +KI      +N 
Sbjct: 250 LMGDSKKIYGHVQGIATGIEDRERGNSSNLLANVNPTFSWVRLAQRVPVKIMIDKLPENR 309

Query: 403 IELRNGFPAEVLF 415
           + L +G  A V  
Sbjct: 310 LTLVSGRTATVRI 322



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 51/144 (35%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            + +V+++ S  SG++ +  V++   + +G  L   +       ++  K  +   +  + 
Sbjct: 36  VKGDVMQVSSDVSGLVTEVLVQDNQTVKKGQVLFKIDVARQALDVEQAKSDLAKAKAGLA 95

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             ++AL   +      +      E+    +    +   SK     + +V    + +  +M
Sbjct: 96  EAEAALAQSHANSIKSQANIRLAEKNAQRYASLMNGAISKQEQDQMFAVRDQARAEHEQM 155

Query: 172 RSIYLNRLDLENKSSLLRALLSSH 195
           ++          +   L    +S 
Sbjct: 156 QAAIQQAQATIRQQKALIEAATSQ 179


>gi|255322321|ref|ZP_05363467.1| auxiliary transport protein, membrane fusion protein family
           [Campylobacter showae RM3277]
 gi|255300694|gb|EET79965.1| auxiliary transport protein, membrane fusion protein family
           [Campylobacter showae RM3277]
          Length = 403

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 55/142 (38%), Gaps = 3/142 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           ++   +  S+ S+GEI     ++++ +   G IKK  V+ G  +  G  +   +     +
Sbjct: 39  AVRGELVKSIESNGEI-YATELIDVGAQVGGQIKKLYVKLGDAVKAGDMIAEIDSATQQN 97

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +D KK  +      +++ K AL+    K+   ++ F        +F    ++  +    
Sbjct: 98  NVDTKKAQLGIYEAKLNSAKVALEISKTKFKREQELFAKNATSKEEFENAKNTLAAN--E 155

Query: 155 YGISSVYRSLKMKLTRMRSIYL 176
             +  +   +      + +  +
Sbjct: 156 ASLKEIEAQIVQAKISLNTAQI 177



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 77/257 (29%), Gaps = 27/257 (10%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +++ +Y+   D      ++  + S+ Q++    K        +Q  + + +    K  LE
Sbjct: 69  QIKKLYVKLGDAVKAGDMIAEIDSATQQNNVDTKK-------AQLGIYEAKLNSAKVALE 121

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           + +   +++  L   N    E      N L      L++ +         L   +     
Sbjct: 122 ISKTKFKREQELFAKNATSKEEFENAKNTLAANEASLKEIEAQIVQAKISLNTAQIDLGY 181

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKKGYT 347
             I +P  G +V  Q          +Q    IV  + L+ ++ K  +    I  +K G  
Sbjct: 182 TKITAPKGGVVVSVQV-EEGQTVNSNQTTPTIVNIADLSKVQLKMEIAEGDITKIKVGSK 240

Query: 348 AT------------VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
                          R                       S   ++  +  YY     + +
Sbjct: 241 VEYSILSEPNRKFYARISSIDPGLTTLSNGKYTTTTSSGSTASSSSSSAIYYYAKAIVDN 300

Query: 396 LAFSDNNIELRNGFPAE 412
           L   D  + +  G   +
Sbjct: 301 L---DGTLRI--GMTTQ 312


>gi|242278424|ref|YP_002990553.1| efflux transporter RND family, MFP subunit [Desulfovibrio
           salexigens DSM 2638]
 gi|242121318|gb|ACS79014.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           salexigens DSM 2638]
          Length = 346

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 73/223 (32%), Gaps = 22/223 (9%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V + D  ++ +++ +          ++    + +         E          + +Q +
Sbjct: 81  VKEGDHVKKGQLIARLDGASSGAKFDRAKAAKKLAAEQLRRRKELLKKGVLAQEEYDQIK 140

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  + L  +    E   + +PIAG I   +        +    ++ IV     + I
Sbjct: 141 AELEQSEASLKEMLVNVEYGIVRAPIAGIINK-RYVDRGERLEVGSNVVDIV---DSSII 196

Query: 331 RA--KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           +    V    I ++KKG   TV          K ++ +I+ +     +     +T+    
Sbjct: 197 KTIINVPEMDISYIKKGQKVTVSVDALP---GKTWEGVIDFVSFKADKFSKTFETK---- 249

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPIT 431
               ITD +      E+R G    V       T+   +  P++
Sbjct: 250 ---VITDNSAG----EIRAGMLGRVSLL--RRTVTDAVTTPLS 283



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 4/99 (4%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            GE   + +V  + S  +G +    V+ G  + +G  +   +   +    D  K + K  
Sbjct: 57  PGETEPDKDV-CVSSESAGTVVWLGVKEGDHVKKGQLIARLDGASSGAKFDRAKAAKKLA 115

Query: 107 RCHIDTEKSALD---FLNNKYDVLEKAFESREEQLLDFL 142
              +   K  L        +YD ++   E  E  L + L
Sbjct: 116 AEQLRRRKELLKKGVLAQEEYDQIKAELEQSEASLKEML 154


>gi|209885778|ref|YP_002289635.1| secretion protein HlyD [Oligotropha carboxidovorans OM5]
 gi|209873974|gb|ACI93770.1| secretion protein HlyD [Oligotropha carboxidovorans OM5]
          Length = 410

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 14/158 (8%)

Query: 34  WSIL--LPIEISV-----SSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLL 85
           W+ L   P+   V      + G+I  +++    + SP++G + K  V  G Q+ QG PL 
Sbjct: 61  WATLTIAPVTDRVFRAEHVTEGKISIDEDRSTQVFSPYTGRVTKLLVRPGEQVAQGQPLF 120

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                E  D +  +   I  L       +SALD    +    ++ F+ +   L D+    
Sbjct: 121 VL---EAADTVQSQNDFIAALTASNKA-QSALDLAQTQGKRAKELFDGKAIPLKDYQSAQ 176

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +         + S   +L+    R+R + L+   + +
Sbjct: 177 ATLIQA--ENDMRSAQTALEASRNRLRILGLSEEAITS 212



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 93/335 (27%), Gaps = 44/335 (13%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              DI +  + D       +L     T     D +     V E      E++       Y
Sbjct: 39  QMSDISSKAVQDPTHYKPTSLEWATLTIAPVTDRVFRAEHVTEGKISIDEDRSTQVFSPY 98

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL---LRALLSSHQKDLTMM 202
               +K+       V +   + +        ++ D     +     ++ L   Q      
Sbjct: 99  TGRVTKLLVRPGEQVAQGQPLFVLEAADTVQSQNDFIAALTASNKAQSALDLAQTQGKRA 158

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           K LF+  A+   D    +  + ++  ++R      +              L      +E 
Sbjct: 159 KELFDGKAIPLKDYQSAQATLIQAENDMRSAQTALEA---------SRNRLRILGLSEEA 209

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMK 320
               +   R   +               T++SPIAGT+V  +      Y       P+  
Sbjct: 210 ITSFQDKGRINPEV--------------TVVSPIAGTVVQRKV-GPGQYISAGATDPVFV 254

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           I       ++   V       +  G    + F   A    ++  A I+ +   I      
Sbjct: 255 IG-DLSTVWLTGYVREADADEIAVGQ--DISFTVLA-SPGRERNARIDYVATAIDPVTR- 309

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                   + ++ T     + +  L+    A V  
Sbjct: 310 -------RLTIRAT---IDNADRSLKPEMFANVTI 334


>gi|33603252|ref|NP_890812.1| putative HlyD-like secretion protein [Bordetella bronchiseptica
           RB50]
 gi|33577376|emb|CAE34641.1| putative HlyD-like secretion protein [Bordetella bronchiseptica
           RB50]
          Length = 359

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 26/238 (10%)

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL-ELRENIHEQKNMLRH 243
           +  + A+ S    +  +++       +   D  + E +    TL  L +++   +     
Sbjct: 61  ARGIAAVGSLRSDESVVLRPEVA-GRIQHIDFKEGEAVRAGQTLVRLDDSVPRAELDQAR 119

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEM----SKLTILEKTREQKTILSPIAGT 299
            N    ++    A  L+      +Q +   A  +    +   + +   ++ TI +P AG 
Sbjct: 120 ANLALAQSQFRRAQDLQGRGFVSQQARDEAASSLKVQQAAAALAQARLDKMTIRAPFAG- 178

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           IV  +  S  +Y  Q Q L    P        +  +V       V  G T +VR      
Sbjct: 179 IVGLRDVSVGDYVNQGQDLA---PLEAIDPLKVDFRVPEMYFSKVGVGQTLSVRLDALPG 235

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +    + ++  + P++     ++           +     ++ +  LR G  A V  
Sbjct: 236 EQR---QGVVYAVSPLVDAGGRSI-----------LLRATVANPDSVLRPGMFARVQL 279



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 51/143 (35%), Gaps = 5/143 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P    +++ G + ++++V  ++   +G I+    + G  +  G  L+  +D      +D
Sbjct: 58  TPFARGIAAVGSLRSDESV-VLRPEVAGRIQHIDFKEGEAVRAGQTLVRLDDSVPRAELD 116

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + ++   +      +     L  +  V ++A +     L           +++    I
Sbjct: 117 QARANLALAQSQFRRAQD----LQGRGFVSQQARDEAASSLKVQQAAAALAQARLDKMTI 172

Query: 158 SSVYRSLKMKLTRMRSIYLNRLD 180
            + +  +          Y+N+  
Sbjct: 173 RAPFAGIVGLRDVSVGDYVNQGQ 195


>gi|330824187|ref|YP_004387490.1| secretion protein HlyD family protein [Alicycliphilus denitrificans
           K601]
 gi|329309559|gb|AEB83974.1| secretion protein HlyD family protein [Alicycliphilus denitrificans
           K601]
          Length = 332

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 93/269 (34%), Gaps = 22/269 (8%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS----QN 214
            +  +L  +   +++          + +LLR    S  ++L   ++ +          + 
Sbjct: 69  QLLATLDTQTLALQAEQAQAQIGVQQQNLLRLKNGSRPEELAQARSSYAAAQADAERARK 128

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI---SRDLEQNQR 271
           DL + + I   +           +            A    A  L EI     D+   + 
Sbjct: 129 DLARLQGIAANTDNRGVSAQELDRARAAVQVADAQAAQQRDALRLTEIGPRKEDIAAAEA 188

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 ++L +L+    Q  +++P    +V ++     + A   +P+   +  ++  ++R
Sbjct: 189 QLKSSEAQLALLQHQVSQGQLIAPSDA-VVRSRLLEPGDMATPQKPV-YALAITRPKWVR 246

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEY 386
             V    +  VK G +A V      D         +  I  +      + Q   L+T   
Sbjct: 247 VYVNEPDLGKVKPGQSARVTTDSAPDR---PITGKVGYISSVAEFTPKAVQTEELRTSLV 303

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLF 415
           YEV + + D     N+  LR G PA V+ 
Sbjct: 304 YEVRVVVED-----NDDALRLGQPATVVL 327



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 58/182 (31%), Gaps = 19/182 (10%)

Query: 56  VVEIKSPFS-GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
                +    G + + +V+ G  +  G  L T +        +  +  I   + ++   K
Sbjct: 42  RQVSLAFDGSGRVAELKVDEGDAVKAGQLLATLDTQTLALQAEQAQAQIGVQQQNLLRLK 101

Query: 115 SA-----LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM--- 166
           +      L    + Y   +   E   + L    G   +T ++  +       R+      
Sbjct: 102 NGSRPEELAQARSSYAAAQADAERARKDLARLQGIAANTDNRGVSAQELDRARAAVQVAD 161

Query: 167 ----------KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                     +LT +     +    E +     A L+  Q  ++  + +   +AV ++ L
Sbjct: 162 AQAAQQRDALRLTEIGPRKEDIAAAEAQLKSSEAQLALLQHQVSQGQLIAPSDAVVRSRL 221

Query: 217 NQ 218
            +
Sbjct: 222 LE 223


>gi|229515139|ref|ZP_04404599.1| hypothetical protein VCB_002796 [Vibrio cholerae TMA 21]
 gi|229347844|gb|EEO12803.1| hypothetical protein VCB_002796 [Vibrio cholerae TMA 21]
          Length = 364

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 55/167 (32%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L + +  +    ++  ++ +KN        K+  +     
Sbjct: 77  SGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       G+ S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +    +          +   + + E +A+     + + R     
Sbjct: 197 DLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQ 243



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 76/230 (33%), Gaps = 40/230 (17%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + +    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 90  QVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYD 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I +P  G I      + +   Q +Q +M I+       +  ++
Sbjct: 150 LAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQV-QANQVIM-ILQDLNDLEVAIEI 207

Query: 335 T----------PKQIQHVK--KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                       + I  +         ++   Y                   +Q  ++ Q
Sbjct: 208 PHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTY------------------STQPSSDSQ 249

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH-PIT 431
           T   Y V+L   DL        +  G  A+VL  A N T    +I  P+T
Sbjct: 250 T---YSVVLGFEDL----KGFRVMPGMSAKVLPVADNPTAENTLITLPLT 292


>gi|158425535|ref|YP_001526827.1| secretion protein [Azorhizobium caulinodans ORS 571]
 gi|158332424|dbj|BAF89909.1| secretion protein [Azorhizobium caulinodans ORS 571]
          Length = 434

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 54/130 (41%), Gaps = 3/130 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + V + +  SG + + Q  +G  + +G PL T +       +D  K ++   + ++D
Sbjct: 97  VAMDEVNVHARVSGYLSEIQFTDGQLVKKGDPLFTLDQRPFKIALDQAKANLAQAQANLD 156

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY-RSLKMKLTR 170
             ++ L+    K  + ++   +  +Q  D   +   T +       ++V    L ++ T+
Sbjct: 157 YAQTDLE--RAKTLLQDRNSTAISKQTFDQRTQTERTAAATLQAQEAAVASAQLDLEFTQ 214

Query: 171 MRSIYLNRLD 180
           + +    R+ 
Sbjct: 215 LTAPISGRIG 224


>gi|114705191|ref|ZP_01438099.1| Secretion protein HlyD [Fulvimarina pelagi HTCC2506]
 gi|114539976|gb|EAU43096.1| Secretion protein HlyD [Fulvimarina pelagi HTCC2506]
          Length = 473

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 47/136 (34%), Gaps = 5/136 (3%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +     V  +++   GI+ +   E GS++ +G  L   +       + L +  +    
Sbjct: 55  GRVAASREVQ-VRARVGGILLERDFEEGSRVAEGDLLFRIDPATYEAEVALARAQVVEAE 113

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            ++   + + +    +   L +   S +  L D +       ++V          SL++ 
Sbjct: 114 ANLVQAQRSEE----RARTLAQRGASSQANLDDAVSGRQLAEARVEAAQAQLRSASLQLD 169

Query: 168 LTRMRSIYLNRLDLEN 183
              + +       LE 
Sbjct: 170 YATVEAPVGGITSLEQ 185


>gi|28870778|ref|NP_793397.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28854027|gb|AAO57092.1| HlyD family secretion protein [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 294

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 68/216 (31%), Gaps = 19/216 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q+      R    +  E +E   + +   +         NL     L+E      +  
Sbjct: 78  IDQDRFRLTLRQTQATVAERQETWEQARRENKR---NRGLGNLVAREQLEESQSREARAL 134

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +    +   +   ++  I SP+ G  + +++     +    +P++ +V  S   +I
Sbjct: 135 SALGESRVAVDAAQLNLDRSVIRSPVDGY-LNDRAPRDHEFVTAGRPVLSVV-DSASFHI 192

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQDN 379
                  ++  +  G    +R             +I+  I+           P ++   +
Sbjct: 193 DGYFEETKLDGIHVGQGVDIRVIGDNARLTGHVVSIVAGIEDRDRSSGSNLLPNVNPAFS 252

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            ++  +   V +   ++     N  +  G  A V  
Sbjct: 253 WVRLAQRIPVRIAFDEV---PGNFRMIAGRTATVSI 285



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           +VV+I    SG+I+K +V +   + +G  L T +       +   + ++   +   +  +
Sbjct: 46  DVVQIAPDVSGLIQKVEVTDNQPVHKGQVLFTIDQDRFRLTLRQTQATVAERQETWEQAR 105

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                     +++ +      EQL +   +     S +    ++     L +  + +RS
Sbjct: 106 RENKRNRGLGNLVAR------EQLEESQSREARALSALGESRVAVDAAQLNLDRSVIRS 158


>gi|134291702|ref|YP_001115471.1| secretion protein HlyD family protein [Burkholderia vietnamiensis
           G4]
 gi|134134891|gb|ABO59216.1| secretion protein HlyD family protein [Burkholderia vietnamiensis
           G4]
          Length = 357

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 51/171 (29%), Gaps = 4/171 (2%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K + R          L   +   G   W         VS +G I   +  V  K P  G 
Sbjct: 2   KTIPRPLLIGAGAAVLAVCVAYYGWSRWRDGQTDAGLVSGNGRIEATEIDVATKLP--GR 59

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +    V+ G  +  G PL   + +     +D  +   +       +  + +    +    
Sbjct: 60  VTAMLVDEGDFVKAGQPLARMDVVVLQAQLDEAQARAQQAVNTAASVDAQVAQRRSDKAA 119

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            E     RE +L     +     S+  +   +S  + L     R  S+   
Sbjct: 120 AEAVVVQRESELDAATRRL--ARSETLSRDGASSLQELDDDRARAGSLRAT 168



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/298 (9%), Positives = 81/298 (27%), Gaps = 11/298 (3%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +      R   +L   G +      +    +  +   L     R +        ++ + +
Sbjct: 52  VATKLPGRVTAMLVDEGDFVKAGQPLARMDVVVLQAQLDEAQARAQQAVNTAASVDAQVA 111

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             R+  ++ +  +   ++  +             R    S  EL ++     ++   +N 
Sbjct: 112 QRRSDKAAAEAVVVQRESELDAATRRLARSETLSRDGASSLQELDDDRARAGSLRATVNA 171

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +     A         L   +       + +  +        + SP  G + Y +  
Sbjct: 172 ARAQVQAAQAAIDA-TQAQLVAARSAVTAAQATVARVRADIADSELTSPRDGRVQY-RIA 229

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
            S         ++ +V  S   Y+   +    +  V  G    +         E    A 
Sbjct: 230 ESGEVLPAGGKVLNVVDLSD-VYMTFFLPEAAVGRVPLGADVRIVLDA---APEYVIPAR 285

Query: 367 IEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  +         + +  + + +  + V  +I       +   ++ G P        +
Sbjct: 286 VSYVSSTAQFTPKTVETASERQKLMFRVKARIDRDLLQRHLKLVKTGLPGVAWLKTDS 343


>gi|320529645|ref|ZP_08030725.1| efflux transporter, RND family, MFP subunit [Selenomonas artemidis
           F0399]
 gi|320138138|gb|EFW30040.1| efflux transporter, RND family, MFP subunit [Selenomonas artemidis
           F0399]
          Length = 350

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 56/210 (26%), Gaps = 18/210 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +   D+ Q+           R  +   +  L    ELY  A    A  L +     +  
Sbjct: 88  VIDARDVQQKANAADAGVASARAQMQLARTNLARYEELYA-AQAISAAALDQYRAQADAA 146

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +  +    ++ T          +++   G I               Q +M +        
Sbjct: 147 EAAYRQAAAQSTEASNALGYTHLVAGADGVISNITV-EEGQVVAAGQTVMTLT-QEGARE 204

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           I   V   ++  V  G  A V                + +I P              Y  
Sbjct: 205 IEIAVPESRLGTVTVGMPAAVTLWADDMSYT----GTVREIAPAADAATGT------YAA 254

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + +TD   +   + L  G  A V  ++  
Sbjct: 255 RIALTD---APAELPL--GMTAHVRLSSAE 279



 Score = 36.1 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 15/153 (9%), Positives = 43/153 (28%), Gaps = 4/153 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I    V  G+++  G  L+  +  +     +     + + R  +   ++ L      
Sbjct: 66  GGQILSRNVNVGTRVRAGDVLMVIDARDVQQKANAADAGVASARAQMQLARTNLARYEEL 125

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y     +  + ++          +          +S        +     +  N    E 
Sbjct: 126 YAAQAISAAALDQYRAQADAAEAAYRQAAAQSTEASNALGYTHLVAGADGVISNITVEEG 185

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +       + +  ++      +    AV ++ L
Sbjct: 186 QVVAAGQTVMTLTQEGAREIEI----AVPESRL 214


>gi|296137290|ref|YP_003644532.1| efflux transporter, RND family, MFP subunit [Thiomonas intermedia
           K12]
 gi|295797412|gb|ADG32202.1| efflux transporter, RND family, MFP subunit [Thiomonas intermedia
           K12]
          Length = 412

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/156 (12%), Positives = 55/156 (35%), Gaps = 2/156 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V ++G ++    V         ++K+  V+ G+ +  G  LL     +T+  +D  + ++
Sbjct: 52  VVATGYVITPSRVQVASEITGTVVKR-LVDRGAHVKAGQVLLELRADQTSAQLDQARAAL 110

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           + L       ++A      K  V +   + +  Q +   G   +   +     + +  + 
Sbjct: 111 RQLVEQ-SRPQAAAALAQAKVQVEQAERDLKRAQGVFDAGGGSAQQLEQAQTALRNARQQ 169

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                    ++           + L A  + + +++
Sbjct: 170 RDSAQAAYNAVAPGGAQQRVLEAALNAASAVNARNV 205



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/245 (10%), Positives = 66/245 (26%), Gaps = 24/245 (9%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                L+   + LR L+   +          +          ++ + V+ +     + + 
Sbjct: 98  QTSAQLDQARAALRQLVEQSRPQAAAALAQAKVQVEQAERDLKRAQGVFDAGGGSAQQLE 157

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           + +  LR+  +  D A   +       ++             + L        +  + + 
Sbjct: 158 QAQTALRNARQQRDSAQAAYNAVAPGGAQQRV--------LEAALNAASAVNARNVVRAG 209

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHY 355
           ++G ++        +     Q L  +      T I   V  + I +++ G  A      Y
Sbjct: 210 VSGVVLARNV-EVGDTVTPGQTLFTLA-MDGATEILLPVNEQSIGNLQIGQQAQCVADAY 267

Query: 356 ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            D     F A +  + P + +    L+      + +         +              
Sbjct: 268 PDR---SFAAQVSFLAPQVDRTTGTLEV----RLRVPSPPAWLKQD-------MTVSADI 313

Query: 416 TAKNT 420
                
Sbjct: 314 VTAQR 318


>gi|222106697|ref|YP_002547488.1| HlyD family secretion protein [Agrobacterium vitis S4]
 gi|221737876|gb|ACM38772.1| HlyD family secretion protein [Agrobacterium vitis S4]
          Length = 293

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 73/212 (34%), Gaps = 10/212 (4%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + D  + E  + ++  +L +        +R         +   A    +     EQ Q +
Sbjct: 76  KVDAKRFELALEQAQADLDQAKSSLDEAVRERQREERLGDSASAQARDKAVSAEEQAQAS 135

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
           +   ++   + +   ++  + S + GT+  N S    ++  +    + +V ++    + A
Sbjct: 136 YNKALASRDVAKLDLDRTEVKSTVNGTV-SNFSLQVGDFVNRGTATVAVV-NTDTLRVEA 193

Query: 333 KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNNLQTQEYYEV 389
                ++Q +++G  A+VR      +   + +++   I   +   S       T  +  V
Sbjct: 194 YFEESKLQRIREGDRASVRIMGQKTVLTGRVESMATGIQDRERDSSSGLLVNITPTFNWV 253

Query: 390 ILKIT-----DLAFSDNNIELRNGFPAEVLFT 416
            L         L        L +G  A V   
Sbjct: 254 RLAQRVPVRIHLENVPEGTRLISGLTATVDIQ 285



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 41/109 (37%), Gaps = 7/109 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V EI    +G + +   ++ + + +G  L   +           +++++  +  +D
Sbjct: 42  VRADVAEIAPDVTGPVSEVLAKDNATVRKGDVLFKVDAKRF-------ELALEQAQADLD 94

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             KS+LD    +    E+  +S   Q  D            +N  ++S 
Sbjct: 95  QAKSSLDEAVRERQREERLGDSASAQARDKAVSAEEQAQASYNKALASR 143


>gi|221505145|gb|EEE30799.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 3076

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 69/216 (31%), Gaps = 3/216 (1%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
              + +    L  E       +      +  L+   + E++  D    + DV   A  +  
Sbjct: 1942 QMVGENETKLEHEREVHAQELARIAAELAGLQTVCERERAERDAERAEVDVQHSAQLAEA 2001

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
               L    +  +         +     +L+ +  + R     R   E  ++      ++ 
Sbjct: 2002 RARLADALREKAEEGAALRRALQEAEANLRRQ--QEREAEARRKHAEGLAAERGHREAAR 2059

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +   + K L EK A    ++ ++     +   E      E     R I EL  E   + 
Sbjct: 2060 DETERLRKELEEKCAALLREVEERGEERRRRESERDVERAEHAEKQRQICELR-ENEKKR 2118

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               ++E+ R + + +   A  + ++   E   + + 
Sbjct: 2119 QREVEELERRVAEQRAREAALLRQIENQEDQLQNQQ 2154



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 72/236 (30%), Gaps = 24/236 (10%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFE 132
             +  +G  L         +L   ++   +  R H   +  E+   +   ++ + L K  E
Sbjct: 2011 EKAEEGAALRRALQEAEANLRRQQEREAEARRKHAEGLAAERGHREAARDETERLRKELE 2070

Query: 133  SREEQLLDFLGKYHSTCSKVF-------------NYGISSVYRSLKMKLTRMRSIYLNRL 179
             +   LL  + +      +                  I  +  + K +   +  +     
Sbjct: 2071 EKCAALLREVEERGEERRRRESERDVERAEHAEKQRQICELRENEKKRQREVEELERRVA 2130

Query: 180  DLENKSSLLRALLSSHQKDLTMMKNLFEKNA----VSQNDLNQQERIVYKSTLELRENIH 235
            +   + + L   + + +  L   ++L E+ A      Q +L + +R   +   E RE   
Sbjct: 2131 EQRAREAALLRQIENQEDQLQNQQSLLEEQAKLLVEQQEELLEMQRRCSQIESERREKGS 2190

Query: 236  EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +                 + +      ++D   ++    D   + T  +   E+  
Sbjct: 2191 DDGGREPRDFGELPGQQTKESAERCNAAKDGNDDR----DRGERETERDDELERTE 2242


>gi|144897816|emb|CAM74680.1| HlyD family secretion protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 366

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 65/195 (33%), Gaps = 10/195 (5%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                + + + + ++      L  ++ + +  L  ++    +  +  A       R  ++
Sbjct: 91  GFEEGSRVTKGQVLLRLDDSSLSADLVQAQANLA-LSRANSDRAVRLAGQGAGTERARDE 149

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +     + +K+       ++  +++P AGT+   ++ S   Y Q  Q ++ +   +   
Sbjct: 150 AEAKLRVDQAKVEQARAQLDKTVLVAPFAGTV-GLRTVSVGAYVQPGQDIVNL-EATDPI 207

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            +  +V       ++ G    +          ++F   +  IDP + Q    +       
Sbjct: 208 KVDFRVPEIFSAVMRTG--IELSMTT-DSHPGRQFTGTVYAIDPAVDQNGRAIVV----R 260

Query: 389 VILKITDLAFSDNNI 403
             +   D A      
Sbjct: 261 ARVANGDSALRPGQF 275



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 55/142 (38%), Gaps = 5/142 (3%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            + P+   ++S G + +++ V  I+   +G +K    E GS++ +G  LL  +D   +  
Sbjct: 57  TVGPMAREITSVGSLRSDEAV-VIRPEIAGRVKAIGFEEGSRVTKGQVLLRLDDSSLSAD 115

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   + ++   R +          L  +    E+A +  E +L     K     +++   
Sbjct: 116 LVQAQANLALSRAN----SDRAVRLAGQGAGTERARDEAEAKLRVDQAKVEQARAQLDKT 171

Query: 156 GISSVYRSLKMKLTRMRSIYLN 177
            + + +       T     Y+ 
Sbjct: 172 VLVAPFAGTVGLRTVSVGAYVQ 193


>gi|332969529|gb|EGK08548.1| multidrug resistance protein A [Desmospora sp. 8437]
          Length = 212

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 6/143 (4%)

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           D + K+   E   +   + +P  GTI+ N+           QP+  +V      YI A +
Sbjct: 72  DVIGKIETAEG--QSLEVKAPADGTIIQNKV-QKGQPVTPGQPMGSLV-DLDELYIVANI 127

Query: 335 TPKQIQHVKKGYTATVRFPHYADIR-EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
                + VK+G    +      D   E K K          S       + +Y +V+ +I
Sbjct: 128 EETDYKDVKEGADVKITVDAAPDSTIEGKVKQRGLATASTFSLMPQQNASGDYTKVVQRI 187

Query: 394 T-DLAFSDNNIELRNGFPAEVLF 415
              ++       L  G  A +  
Sbjct: 188 PVKISMDSYPDNLVPGMNATIQI 210


>gi|254443784|ref|ZP_05057260.1| efflux transporter, RND family, MFP subunit [Verrucomicrobiae
           bacterium DG1235]
 gi|198258092|gb|EDY82400.1| efflux transporter, RND family, MFP subunit [Verrucomicrobiae
           bacterium DG1235]
          Length = 417

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/333 (15%), Positives = 109/333 (32%), Gaps = 88/333 (26%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
               G ++ E ++  I S  SG +++  V  G+ +   TP++   +           +  
Sbjct: 63  ARGIGTLVPE-DLRWIASETSGRVERIIVRPGAWVEPETPIMELSN---------PTLEQ 112

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           + L   +  E +  D+L     +                                     
Sbjct: 113 QALDARLAFEAAEADYLTYDVQL------------------------------------- 135

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                        N L L+   + L A       D  +   L ++  VS           
Sbjct: 136 -----------QSNILQLQANLAQLEAQQKEAALDAEIDTELNKEGLVS----------- 173

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
               L++R ++   + +   ++   +   LEF+     +   L   + +     ++  +L
Sbjct: 174 ---NLQMRRSLLRHEQLTTRLD--IERQRLEFSQ--NNLDTQLSARKASVNQAKARFDLL 226

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIR-AKVTPKQIQH 341
           +   +  T+++ +AG ++  Q+          Q L ++  P +    +R A++  K    
Sbjct: 227 QDQFDGLTVVAGVAG-VLQKQTVEEGMQVGIGQNLSQVADPKNLKAVVRIAEINAKD--- 282

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           +  G TA V      D R  K +  I ++DP +
Sbjct: 283 LMIGLTAIV------DTRNGKVRGKISRVDPNV 309


>gi|167035258|ref|YP_001670489.1| secretion protein HlyD family protein [Pseudomonas putida GB-1]
 gi|166861746|gb|ABZ00154.1| secretion protein HlyD family protein [Pseudomonas putida GB-1]
          Length = 288

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 62/200 (31%), Gaps = 44/200 (22%)

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E I  +      IN                        +    +  ++L + +    +  
Sbjct: 113 EAISAELRENAQINAAI--------------------ARGELHEAEAQLQVAKINLARSE 152

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P +G I   +  +  NY    Q +M +V      YI+A     ++  +  G +  V 
Sbjct: 153 VRAPRSGHITNLRL-AEGNYVNTGQAVMALV-DDSTFYIQAYFEETKLPRIGVGDSVKVW 210

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ---------------EYYEVILKITDL 396
                    +  +  +E I   I+ +++N  +Q               +   V +++  +
Sbjct: 211 L----MGAGEPMQGHVESISRGITDRNSNPDSQLLPEVEPTFNWVRLAQRIPVRIRLDQV 266

Query: 397 AFSDNNIELRNGFPAEVLFT 416
                 + L  G  A V   
Sbjct: 267 ---PEGVTLSAGMTASVQVR 283



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 54/160 (33%), Gaps = 10/160 (6%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSI--LLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           R    +L  + ++++  + G   W    L P         +++       I    SG ++
Sbjct: 2   RAAVRTLVTLCVVALAVLAGYQLWQYYMLTPWTRDARVRADVVV------IAPDVSGWVR 55

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKV--SIKNLRCHIDTEKSALDFLNNKYDV 126
           + +V +  Q+  G  L++ +        D        +  +  +   ++A         +
Sbjct: 56  ELKVHDNQQVKAGDLLMSIDRERFQAAFDQASAVTETRAQQLRLREREAARRTALGPEAI 115

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             +  E+ +       G+ H   +++    I+     ++ 
Sbjct: 116 SAELRENAQINAAIARGELHEAEAQLQVAKINLARSEVRA 155


>gi|15641760|ref|NP_231392.1| periplasmic linker protein, putative [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121585818|ref|ZP_01675612.1| HlyD family secretion protein [Vibrio cholerae 2740-80]
 gi|147675452|ref|YP_001217298.1| HlyD family secretion protein [Vibrio cholerae O395]
 gi|153819623|ref|ZP_01972290.1| HlyD family secretion protein [Vibrio cholerae NCTC 8457]
 gi|227081903|ref|YP_002810454.1| putative periplasmic linker protein [Vibrio cholerae M66-2]
 gi|229508140|ref|ZP_04397645.1| hypothetical protein VCF_003374 [Vibrio cholerae BX 330286]
 gi|229511621|ref|ZP_04401100.1| hypothetical protein VCE_003030 [Vibrio cholerae B33]
 gi|229518760|ref|ZP_04408203.1| hypothetical protein VCC_002785 [Vibrio cholerae RC9]
 gi|229607716|ref|YP_002878364.1| hypothetical protein VCD_002628 [Vibrio cholerae MJ-1236]
 gi|254848872|ref|ZP_05238222.1| HlyD family secretion protein [Vibrio cholerae MO10]
 gi|255744828|ref|ZP_05418778.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           cholera CIRS 101]
 gi|262161889|ref|ZP_06030907.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           cholerae INDRE 91/1]
 gi|262169757|ref|ZP_06037448.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           cholerae RC27]
 gi|298498173|ref|ZP_07007980.1| HlyD family secretion protein [Vibrio cholerae MAK 757]
 gi|9656279|gb|AAF94906.1| periplasmic linker protein, putative [Vibrio cholerae O1 biovar El
           Tor str. N16961]
 gi|121549956|gb|EAX59974.1| HlyD family secretion protein [Vibrio cholerae 2740-80]
 gi|126509827|gb|EAZ72421.1| HlyD family secretion protein [Vibrio cholerae NCTC 8457]
 gi|146317335|gb|ABQ21874.1| HlyD family secretion protein [Vibrio cholerae O395]
 gi|227009791|gb|ACP06003.1| putative periplasmic linker protein [Vibrio cholerae M66-2]
 gi|227013658|gb|ACP09868.1| putative periplasmic linker protein [Vibrio cholerae O395]
 gi|229343449|gb|EEO08424.1| hypothetical protein VCC_002785 [Vibrio cholerae RC9]
 gi|229351586|gb|EEO16527.1| hypothetical protein VCE_003030 [Vibrio cholerae B33]
 gi|229355645|gb|EEO20566.1| hypothetical protein VCF_003374 [Vibrio cholerae BX 330286]
 gi|229370371|gb|ACQ60794.1| hypothetical protein VCD_002628 [Vibrio cholerae MJ-1236]
 gi|254844577|gb|EET22991.1| HlyD family secretion protein [Vibrio cholerae MO10]
 gi|255737299|gb|EET92694.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           cholera CIRS 101]
 gi|262021991|gb|EEY40701.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           cholerae RC27]
 gi|262028621|gb|EEY47276.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           cholerae INDRE 91/1]
 gi|297542506|gb|EFH78556.1| HlyD family secretion protein [Vibrio cholerae MAK 757]
          Length = 364

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 55/167 (32%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L + +  +    ++  ++ +KN        K+  +     
Sbjct: 77  SGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       G+ S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +    +          +   + + E +A+     + + R     
Sbjct: 197 DLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQ 243



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 68/212 (32%), Gaps = 39/212 (18%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + +    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 90  QVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYD 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I +P  G I      + +   Q +Q +M I+       +  ++
Sbjct: 150 LAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQV-QANQVIM-ILQDLNDLEVAIEI 207

Query: 335 T----------PKQIQHVK--KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                       + I  +         ++   Y                   +Q  ++ Q
Sbjct: 208 PHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTY------------------STQPSSDSQ 249

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           T   Y V+L   DL        +  G  A+V+
Sbjct: 250 T---YSVVLGFEDL----KGFRVMPGMSAKVI 274


>gi|116623195|ref|YP_825351.1| multidrug resistance efflux pump-like protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116226357|gb|ABJ85066.1| Multidrug resistance efflux pump-like protein [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 428

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/331 (15%), Positives = 104/331 (31%), Gaps = 29/331 (8%)

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           +E      + +    +    E  E      +     T  + F    +    +   +    
Sbjct: 63  SEMLTAPMIGSDSMAITSLREPGELVAPGDVVVQFDTTEQEFRLKEAEADLAEAEQQVIK 122

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLEL 230
                   D E+  ++L A        + + +  L    A  QNDL   E  V +     
Sbjct: 123 AEADSQATDEESHYAMLSAEADVKSARIEVRRNPLIASIAARQNDL-ALEAAVNRQRQTA 181

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           ++  +++      I     +A    A  + +I+R   +N  T   +      +++   Q 
Sbjct: 182 QDYANKKTTSAAGI--AIQKAQENKARVMADIARKNIEN-MTLKAKTGGYVNVQQNSNQN 238

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I     G  +    F   + A+    + +I P      + A V      H+  G   T+
Sbjct: 239 MIY---WG--MQLPPFQLGDTARAGMAVAQI-PDLNSWEVSANVGELDRGHLTIGQQVTI 292

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           +    A    K+F   ++ I                +E  + +   A      ELR G  
Sbjct: 293 KVVALA---GKEFAGKVKNIGGTS-----GPPWDRRFEARIALDHAAP-----ELRPGMT 339

Query: 411 AEVLFTAKNTTLAQEIIHP---ITDNWPKIF 438
           + ++ T    TL   +  P   + ++  + F
Sbjct: 340 SNMVITVD--TLDNVLWIPSQALFESDGRSF 368


>gi|327284002|ref|XP_003226728.1| PREDICTED: centrobin-like [Anolis carolinensis]
          Length = 864

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 69/213 (32%), Gaps = 14/213 (6%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            ++  ++ +++L    D E+   + L    +  ++ +  RE QL                
Sbjct: 397 DLEAARLQVRDLEGSWDVERRQQEALRATLEEQQQDWAQRERQLEQQRQALEDGSRSQLE 456

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLE----------NKSSLLRALLSSHQKDLTMMKN 204
              +   R  +      R +   + +++           +   L+  +S  +      K 
Sbjct: 457 MEKAMTQREAQKAADAQRVLASVQSEVQVLGTELEAVRRERDNLKMEISLVKARYEAQKV 516

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             E       +    ER+       LR+    ++   + + EL      E AN L +   
Sbjct: 517 KLESELKVALEQRVTERLAEVHEESLRQMSAMREQHRKQLLELSSHHEKELANQLAQFKS 576

Query: 265 DLEQNQRT----FADEMSKLTILEKTREQKTIL 293
           DL + +       A+   +++  E+   +  + 
Sbjct: 577 DLAEREDRQRHLTAEYEHRISKQEEEIRELQVK 609



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 78/207 (37%), Gaps = 9/207 (4%)

Query: 95  LIDLKKVSIKNLRCHIDTEKS-ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +D     +       + E++ AL  L  + +  E+A   ++E++ +  G+  +  S   
Sbjct: 312 QLDKTLAKVVEGWNRHEAERTTALHRLQAEKEAAEQALGRQKEKVSEMEGRLENALS-AL 370

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           N    +V +  K K            DLE     +R L  S   +    + L       Q
Sbjct: 371 NREQQAVKQYYKEKEMLEEEKASVLCDLEAARLQVRDLEGSWDVERRQQEALRATLEEQQ 430

Query: 214 NDLNQQERIVYKSTLEL----RENIHEQKNMLRHINELYDEANLEFANYLKEIS---RDL 266
            D  Q+ER + +    L    R  +  +K M +   +   +A    A+   E+     +L
Sbjct: 431 QDWAQRERQLEQQRQALEDGSRSQLEMEKAMTQREAQKAADAQRVLASVQSEVQVLGTEL 490

Query: 267 EQNQRTFADEMSKLTILEKTREQKTIL 293
           E  +R   +   ++++++   E + + 
Sbjct: 491 EAVRRERDNLKMEISLVKARYEAQKVK 517



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 67/179 (37%), Gaps = 7/179 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +   +     + +  + + +S +  L  + + + +  ++ + ++     +Y +   K+
Sbjct: 459 KAMTQREAQKAADAQRVLASVQSEVQVLGTELEAVRRERDNLKMEISLVKARYEAQKVKL 518

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDL--ENKSSLLRALLSSHQKDLTMM-----KNL 205
            +    ++ + +  +L  +    L ++    E     L  L S H+K+L         +L
Sbjct: 519 ESELKVALEQRVTERLAEVHEESLRQMSAMREQHRKQLLELSSHHEKELANQLAQFKSDL 578

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            E+    ++   + E  + K   E+RE   + + +     E+  +       +  E  R
Sbjct: 579 AEREDRQRHLTAEYEHRISKQEEEIRELQVKHRRLEAQRAEMVGQFQAMMQAHWNEALR 637


>gi|324115155|gb|EGC09119.1| HlyD family protein secretion protein [Escherichia fergusonii B253]
          Length = 310

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 80/236 (33%), Gaps = 33/236 (13%)

Query: 204 NLFEKNAVS--------QNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLE 254
            L +K  V         Q  L + E  V   ++  +E   E     R  +  +  E   +
Sbjct: 67  QLVKKGQVLFTIDQPRYQKALAEAEADVAYYSVLAQEKRQEASRRNRLGVQAMSREEIDQ 126

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N L+ +   L + Q T         + +   E+  I +P  G +     ++   +  +
Sbjct: 127 ANNVLQTVLHQLAKAQATR-------DLAKLDLERTVIRAPADGWVTNLNVYT-GEFITR 178

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               + +V  +   Y+ A +   +++ V+ GY A +        R    K  ++ +   +
Sbjct: 179 GSTAVALVKQN-TFYVLAYMEETKLEGVRPGYRAEI--TPLGSNR--VLKGTVDSVAAGV 233

Query: 375 SQQDNNLQTQEYYEV-----ILKITDLAFSDNNIELRN------GFPAEVLFTAKN 419
           +   +    +    +      +++         ++ +       G  A V+ T K+
Sbjct: 234 TNASSTRDAKGMATIDSNLEWVRLAQRVPVRIRLDAQPENLWPAGTTATVVVTGKD 289



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 45/154 (29%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    +   + L+ +  I     W            + +     +VV I    +G+
Sbjct: 2   KTLIRKLTRTAITLVLVILAFIAIFRAWVYYTE----SPWTRDARFSADVVAIAPDVAGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V +   + +G  L T +       +   +  +      +  EK       N+  V
Sbjct: 58  ITNVNVHDNQLVKKGQVLFTIDQPRYQKALAEAEADV-AYYSVLAQEKRQEASRRNRLGV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVLHQLAKAQATRDLAKL 150


>gi|153827699|ref|ZP_01980366.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149737826|gb|EDM52731.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 295

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 21/206 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S   + + + +V   +   R N+   +  L      Y+     FA          ++ + 
Sbjct: 87  SGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKG-SISKESYDEAEA 145

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           ++    + +  L+ T  ++ I +P AG I     F    Y Q       IV     + +R
Sbjct: 146 SYYALSADIESLKATIARREIKAPFAGVIGIRNVF-LGQYLQPGT---DIVRLEDTSVMR 201

Query: 332 AK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
            +  V  + I  +       +    Y       FK  I  I+P +S Q   +Q Q     
Sbjct: 202 LRFTVPQRDISRISLDQEVDIFVDAYPLT---SFKGSISAIEPAVSVQSGLIQVQ----- 253

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
                     +++ +LR+G  A    
Sbjct: 254 ------ADIPNSDGKLRSGMFARANI 273



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 63/197 (31%), Gaps = 20/197 (10%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +   E+G+Q+ +  PL+  +       +   +  +   +   +  K      +   
Sbjct: 78  GVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKGSISK 137

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN- 183
           +  ++A  S      D      +   +      + V     + L +      + + LE+ 
Sbjct: 138 ESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLEDT 197

Query: 184 ----------KSSLLRALLSSHQKDLTMMKNLFE-KNAVSQND--------LNQQERIVY 224
                     +  + R  L            L   K ++S  +        L Q +  + 
Sbjct: 198 SVMRLRFTVPQRDISRISLDQEVDIFVDAYPLTSFKGSISAIEPAVSVQSGLIQVQADIP 257

Query: 225 KSTLELRENIHEQKNML 241
            S  +LR  +  + N++
Sbjct: 258 NSDGKLRSGMFARANII 274


>gi|153802160|ref|ZP_01956746.1| HlyD family secretion protein [Vibrio cholerae MZO-3]
 gi|124122295|gb|EAY41038.1| HlyD family secretion protein [Vibrio cholerae MZO-3]
          Length = 364

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 55/167 (32%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L + +  +    ++  ++ +KN        K+  +     
Sbjct: 77  SGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       G+ S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +    +          +   + + E +A+     + + R     
Sbjct: 197 DLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQ 243



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 76/230 (33%), Gaps = 40/230 (17%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + +    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 90  QVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYD 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I +P  G I      + +   Q +Q +M I+       +  ++
Sbjct: 150 LAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQV-QANQVIM-ILQDLNDLEVAIEI 207

Query: 335 T----------PKQIQHVK--KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                       + I  +         ++   Y                   +Q  ++ Q
Sbjct: 208 PHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTY------------------STQPSSDSQ 249

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH-PIT 431
           T   Y V+L   DL        +  G  A+VL  A N T    +I  P+T
Sbjct: 250 T---YSVVLGFEDL----KGFRVMPGMSAKVLPVADNPTAENTLITLPLT 292


>gi|170726373|ref|YP_001760399.1| secretion protein HlyD family protein [Shewanella woodyi ATCC
           51908]
 gi|169811720|gb|ACA86304.1| secretion protein HlyD family protein [Shewanella woodyi ATCC
           51908]
          Length = 357

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 69/220 (31%), Gaps = 33/220 (15%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHE---QKNMLRHINELYDEANLEFANYLK-EISRDL 266
           + Q +L   E         L+E+  E    +  LR I  L+D  N   A   + +   ++
Sbjct: 131 IPQTELKMLESQYSYGLARLKESEAEYTGHQVSLRRIQRLFDSGNGSVAELDEMKTKANI 190

Query: 267 EQNQ-----RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP---- 317
            + +     R        +    +   +  + SP+ G +V   + +              
Sbjct: 191 LEARVAVASRELEIAKENINTQLRRLLEYKVYSPMQGVVVDVMAQA-GEVISSLTTFGTD 249

Query: 318 ----LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               +  IV      ++  +V+ + I  V  G  A  +   Y D+        +  I P 
Sbjct: 250 EQSGICTIV-DMNSLHVEVEVSEQYISRVAVGQRALAKLNAYPDL---PVDIEVALIVPT 305

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            ++  + ++             L    N+  +      EV
Sbjct: 306 ANKDKSTVKVW-----------LNIIKNDPRILPEMGVEV 334



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 57/147 (38%), Gaps = 5/147 (3%)

Query: 38  LPIEISVS--SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            P+  +V   +SG I+ +  ++ + S  SG +    +E G ++ QG  L TF+D      
Sbjct: 77  SPVTETVVLQASGYIMAK-KMMTVSSNVSGRLNSIMIEEGMRVKQGELLATFDDSIPQTE 135

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           + + +         +   ++           +++ F+S    + +       T + +   
Sbjct: 136 LKMLESQYSYGLARLKESEAEYTGHQVSLRRIQRLFDSGNGSVAEL--DEMKTKANILEA 193

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLE 182
            ++   R L++    + +     L+ +
Sbjct: 194 RVAVASRELEIAKENINTQLRRLLEYK 220


>gi|157875544|ref|XP_001686160.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68129234|emb|CAJ07774.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 3167

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/211 (9%), Positives = 75/211 (35%), Gaps = 7/211 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                       + ++++ +  +   + EK A D    + D   +  ++R     +     
Sbjct: 2677 RLAAELNRAQEEAERLAAELEKAQEEAEKLAADLEKAEEDAERQKADNRRLAADNERLAA 2736

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                ++     +++     + +  R+ + +   + + E  ++ L       ++     + 
Sbjct: 2737 ELDRAQEEAERLAAELDRAQEEAERLAAELDRAQEEAEKLAADLEKAEEDAERQKADNRR 2796

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK---- 260
            L   N     +L++ +    +   EL     E + +   + +  ++A  + A+  +    
Sbjct: 2797 LAADNERLAAELDRAQEEAERLAAELDRAQEEAEKLAADLEKAEEDAERQKADNRRLAAD 2856

Query: 261  --EISRDLEQNQRTFADEMSKLTILEKTREQ 289
               ++ +L++ Q       ++L   ++  E+
Sbjct: 2857 NERLAAELDRAQEEAERLAAELDRAQEEAER 2887



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/240 (12%), Positives = 76/240 (31%), Gaps = 30/240 (12%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            ++      +D  +   + L   +D  +   + L  + D  ++  E     L     +  +
Sbjct: 2730 DNERLAAELDRAQEEAERLAAELDRAQEEAERLAAELDRAQEEAEKLAADL--EKAEEDA 2787

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRS--------IYLNRLDLENKSSLLRALLSSHQKDL 199
               K  N  +++    L  +L R +         +   + + E  ++ L       ++  
Sbjct: 2788 ERQKADNRRLAADNERLAAELDRAQEEAERLAAELDRAQEEAEKLAADLEKAEEDAERQK 2847

Query: 200  TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
               + L   N     +L++ +    +   EL     E + +   ++   ++A  + A+  
Sbjct: 2848 ADNRRLAADNERLAAELDRAQEEAERLAAELDRAQEEAERLAAELDRAQEDAERQKADNR 2907

Query: 260  K--------------------EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            +                     ++ +L   +R  A    K    +  R  +  L+   G 
Sbjct: 2908 RLAAELDRAQEDAERQKADNRRLTGELADKERELAAFREKRRAAQDARADEPELALADGI 2967



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 69/206 (33%), Gaps = 2/206 (0%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL-EKAFESREEQLLDFLGK 144
                       + ++++ +  +   + E+ A D    + D   +KA + R    +D   +
Sbjct: 1221 RLAAELEKTQEEAERLAAELEKAQEEAERLAADLEKAEEDAERQKAEKERLAAEVDRAQE 1280

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 +           R           +   + + E  ++ L       ++     + 
Sbjct: 1281 EAEKLAADLEKAEEDAERQKADNERLAAELNRAQEEAERLAADLEKAEEDAERQKADNRR 1340

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            L   N     +L + +    +   EL     E + +   + +  ++A  + A+  + ++ 
Sbjct: 1341 LAADNERLAAELERAQEEAERLAAELDRAQEEAERLAADLEKAEEDAERQKADNER-LAA 1399

Query: 265  DLEQNQRTFADEMSKLTILEKTREQK 290
            +L++ Q       + L   E+  E++
Sbjct: 1400 ELDRAQEEAEKLAADLEKAEEDAERQ 1425



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/211 (11%), Positives = 73/211 (34%), Gaps = 7/211 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                       + ++++ +  R   + EK A D    + D   +  ++R     +     
Sbjct: 1669 RLAAELERAQEEAERLAAELDRAQEEAEKLAADLEKAEEDAERQKADNRRLAADNERLAA 1728

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMMKN 204
                ++     +++     +    R ++       +L+        L +  +K     + 
Sbjct: 1729 ELDRAQEEAERLAADLEKAEEDAERQKADNERLAAELDRAQEEAERLAAELEKAQEEAER 1788

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK---- 260
            L  +   +Q +  +Q+    +   EL     E + +   + +  +EA  + A+  +    
Sbjct: 1789 LAAELEKAQEEAERQKADKERLAAELDRAQEEAEKLAADLEKAEEEAERQKADNRRLAAD 1848

Query: 261  --EISRDLEQNQRTFADEMSKLTILEKTREQ 289
               ++ +LE+ Q       ++L   ++  E+
Sbjct: 1849 NERLAAELERAQEEAERLAAELERAQEEAER 1879



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 69/212 (32%), Gaps = 9/212 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                       + ++++ +  R   + E+ A +    + +  + A +  + +      K 
Sbjct: 2614 RLAAELERAQEEAERLAAELDRAQEEAERLAAELDRAQEEAEKLAADLEKAEEEAERQKA 2673

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             +                L  +L + +       + E  ++ L       ++     + L
Sbjct: 2674 DNERLAAELNRAQEEAERLAAELEKAQE------EAEKLAADLEKAEEDAERQKADNRRL 2727

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEI 262
               N     +L++ +    +   EL     E + +   ++   +EA     +     ++ 
Sbjct: 2728 AADNERLAAELDRAQEEAERLAAELDRAQEEAERLAAELDRAQEEAEKLAADLEKAEEDA 2787

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             R    N+R  AD       L++ +E+   L+
Sbjct: 2788 ERQKADNRRLAADNERLAAELDRAQEEAERLA 2819



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/211 (10%), Positives = 66/211 (31%), Gaps = 7/211 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                       + ++++ +  R   + EK A D    + +   +  E+R         + 
Sbjct: 1039 RLAAELERAQEEAERLAAELDRAQEEAEKLAADLEKAEEEAERQKAENRRLAAELERAQE 1098

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTR-MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +                L   L +        + +    ++ L       ++    ++ 
Sbjct: 1099 EAERLAAELDRAQEEAEKLAADLEKAEEEAERQKAENRRLAAELERAQEEAERLAAELER 1158

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN------LEFANY 258
              E+      +L++ +    K   EL     E + +   ++   +EA        +    
Sbjct: 1159 AQEEAERLAAELDRAQEEAEKLAAELERAQEEAEKLAAELDRAQEEAERLAAELEKAQEE 1218

Query: 259  LKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             + ++ +LE+ Q       ++L   ++  E+
Sbjct: 1219 AERLAAELEKTQEEAERLAAELEKAQEEAER 1249



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 59/201 (29%), Gaps = 3/201 (1%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL-EKAFESREEQLLDFLGKYHSTCSKVFN 154
             D ++++ +  R   + E+ A D    + D   +KA   R    LD   +     +    
Sbjct: 1721 ADNERLAAELDRAQEEAERLAADLEKAEEDAERQKADNERLAAELDRAQEEAERLAAELE 1780

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   R               + D E  ++ L       +K    ++   E+    + 
Sbjct: 1781 KAQEEAERLAAELEKAQEEAERQKADKERLAAELDRAQEEAEKLAADLEKAEEEAERQKA 1840

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQRT 272
            D  +      +   EL     E + +   +    +EA    A  +  +E +  L  +   
Sbjct: 1841 DNRRLAADNERLAAELERAQEEAERLAAELERAQEEAERLAAEVDRAQEEAEQLAADLEK 1900

Query: 273  FADEMSKLTILEKTREQKTIL 293
              +E  +     +        
Sbjct: 1901 AEEEAERQKADNRRLAADNER 1921



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 77/211 (36%), Gaps = 4/211 (1%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            E+       + ++++ +  R   + E+ A +    + +  + A +  + +      K  +
Sbjct: 1657 EEEAERQKAENRRLAAELERAQEEAERLAAELDRAQEEAEKLAADLEKAEEDAERQKADN 1716

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                  N  +++     + +  R+ + +     D E + +    L +   +     + L 
Sbjct: 1717 RRLAADNERLAAELDRAQEEAERLAADLEKAEEDAERQKADNERLAAELDRAQEEAERLA 1776

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEIS 263
             +   +Q +  +    + K+  E      +++ +   ++   +EA     +     +E  
Sbjct: 1777 AELEKAQEEAERLAAELEKAQEEAERQKADKERLAAELDRAQEEAEKLAADLEKAEEEAE 1836

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            R    N+R  AD       LE+ +E+   L+
Sbjct: 1837 RQKADNRRLAADNERLAAELERAQEEAERLA 1867



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 65/199 (32%), Gaps = 2/199 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                D ++++ +  R   + E+ A +    + +    A E  + Q      K        
Sbjct: 1466 RQKADNERLAAELDRAQEEAERLAAELEKAQEEAERLAAELEKAQEEAERQKADKERLAA 1525

Query: 153  FNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                       L   L +        + D E  ++ L       ++    ++   E    
Sbjct: 1526 ELDRAQEEAEKLAADLEKAEEDAERQKADNERLAAELNRAQEEAERLAADLEKAEEDAER 1585

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             + D  +      +   EL     E + +   + +  +EA  + A+  + ++ +L++ Q 
Sbjct: 1586 QKADNRRLAADNERLAAELERAQEEAERLAAELEKAQEEAERQKAD-KERLAAELDRAQE 1644

Query: 272  TFADEMSKLTILEKTREQK 290
                  + L   E+  E++
Sbjct: 1645 EAEKLAADLEKAEEEAERQ 1663



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 67/206 (32%), Gaps = 2/206 (0%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL-EKAFESREEQLLDFLGK 144
                       + ++++ +  R   + E+ A D    + D   +KA   R    LD   +
Sbjct: 1347 RLAAELERAQEEAERLAAELDRAQEEAERLAADLEKAEEDAERQKADNERLAAELDRAQE 1406

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 +           R                 +L+        L +  +K     + 
Sbjct: 1407 EAEKLAADLEKAEEDAERQKADNERLAADNERLAAELDRAQEEAERLAADLEKAEEDAER 1466

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
                N     +L++ +    +   EL +   E + +   + +  +EA  + A+  + ++ 
Sbjct: 1467 QKADNERLAAELDRAQEEAERLAAELEKAQEEAERLAAELEKAQEEAERQKAD-KERLAA 1525

Query: 265  DLEQNQRTFADEMSKLTILEKTREQK 290
            +L++ Q       + L   E+  E++
Sbjct: 1526 ELDRAQEEAEKLAADLEKAEEDAERQ 1551



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 73/213 (34%), Gaps = 4/213 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE-SREEQLLDFLGK 144
                       + ++++ +  R   + EK A +    + +  + A E  R ++  + L  
Sbjct: 1151 RLAAELERAQEEAERLAAELDRAQEEAEKLAAELERAQEEAEKLAAELDRAQEEAERLAA 1210

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                  +      + + ++ +        +   + + E  ++ L       ++     + 
Sbjct: 1211 ELEKAQEEAERLAAELEKTQEEAERLAAELEKAQEEAERLAADLEKAEEDAERQKAEKER 1270

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKE 261
            L  +   +Q +  +    + K+  +      + + +   +N   +EA     +     ++
Sbjct: 1271 LAAEVDRAQEEAEKLAADLEKAEEDAERQKADNERLAAELNRAQEEAERLAADLEKAEED 1330

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              R    N+R  AD       LE+ +E+   L+
Sbjct: 1331 AERQKADNRRLAADNERLAAELERAQEEAERLA 1363



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 64/201 (31%), Gaps = 7/201 (3%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             DL+K      R   D E+ A +    + +    A E    Q            ++    
Sbjct: 2246 ADLEKAEEDAERQKADNERLAAELNRAQEEAERLAAELERAQEEAEKLAADLEKAEEEAE 2305

Query: 156  GISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +    L  +L R +        +LE        L +  +K     +     N     
Sbjct: 2306 RQKADNEQLAAELNRAQEEAEKLAAELEKAQEEAEKLAADLEKAEEEAERQKADNERLAA 2365

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN------LEFANYLKEISRDLEQ 268
            +LN+ +    K   EL +   E + +   + +  +EA              + ++ +LE+
Sbjct: 2366 ELNRAQEEAEKLAAELEKAQEEAERLAAELEKAQEEAERLAAELNRAQEEAERLAAELER 2425

Query: 269  NQRTFADEMSKLTILEKTREQ 289
             Q       ++L   ++  E+
Sbjct: 2426 AQEEAERLAAELDRAQEEAER 2446



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 73/204 (35%), Gaps = 7/204 (3%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                + +K++ +  R   + EK A +    + +    A E  + Q            ++ 
Sbjct: 1172 RAQEEAEKLAAELERAQEEAEKLAAELDRAQEEAERLAAELEKAQEEAERLAAELEKTQE 1231

Query: 153  FNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                +++     + +  R+ + +     D E + +    L +   +     + L      
Sbjct: 1232 EAERLAAELEKAQEEAERLAADLEKAEEDAERQKAEKERLAAEVDRAQEEAEKLAADLEK 1291

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK------EISRD 265
            ++ D  +Q+    +   EL     E + +   + +  ++A  + A+  +       ++ +
Sbjct: 1292 AEEDAERQKADNERLAAELNRAQEEAERLAADLEKAEEDAERQKADNRRLAADNERLAAE 1351

Query: 266  LEQNQRTFADEMSKLTILEKTREQ 289
            LE+ Q       ++L   ++  E+
Sbjct: 1352 LERAQEEAERLAAELDRAQEEAER 1375



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/218 (11%), Positives = 63/218 (28%), Gaps = 14/218 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                       + ++++ +  R   + EK A D    +     +  E+R         + 
Sbjct: 990  RLAAELERAQEEAERLAAELDRAQEEAEKLAADLEKAEEKAERQKAENRRLAAELERAQE 1049

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR--------LDLENKSSLLRALLSSHQK 197
             +                L   L +       +         +LE        L +   +
Sbjct: 1050 EAERLAAELDRAQEEAEKLAADLEKAEEEAERQKAENRRLAAELERAQEEAERLAAELDR 1109

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL---- 253
                 + L      ++ +  +Q+    +   EL     E + +   +    +EA      
Sbjct: 1110 AQEEAEKLAADLEKAEEEAERQKAENRRLAAELERAQEEAERLAAELERAQEEAERLAAE 1169

Query: 254  --EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
                    ++++ +LE+ Q       ++L   ++  E+
Sbjct: 1170 LDRAQEEAEKLAAELERAQEEAEKLAAELDRAQEEAER 1207



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 71/199 (35%), Gaps = 2/199 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                D ++++ +  R   + EK A D    + D   +  ++      +         ++ 
Sbjct: 1389 RQKADNERLAAELDRAQEEAEKLAADLEKAEEDAERQKADNERLAADNERLAAELDRAQE 1448

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                +++     +    R ++       +L+        L +  +K     + L  +   
Sbjct: 1449 EAERLAADLEKAEEDAERQKADNERLAAELDRAQEEAERLAAELEKAQEEAERLAAELEK 1508

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            +Q +  +Q+    +   EL     E + +   + +  ++A  + A+  + ++ +L + Q 
Sbjct: 1509 AQEEAERQKADKERLAAELDRAQEEAEKLAADLEKAEEDAERQKADNER-LAAELNRAQE 1567

Query: 272  TFADEMSKLTILEKTREQK 290
                  + L   E+  E++
Sbjct: 1568 EAERLAADLEKAEEDAERQ 1586



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 69/202 (34%), Gaps = 14/202 (6%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            E+       + ++++ +  R   + E+ A +    + +  + A +  + +      K  +
Sbjct: 978  EEEAERQKAENRRLAAELERAQEEAERLAAELDRAQEEAEKLAADLEKAEEKAERQKAEN 1037

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                            L  +L R +       + E  ++ L       ++     + L  
Sbjct: 1038 RRLAAELERAQEEAERLAAELDRAQE------EAEKLAADLEKAEEEAERQKAENRRLAA 1091

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                   +L + +    +   EL     E + +   + +  +EA  + A   + ++ +LE
Sbjct: 1092 -------ELERAQEEAERLAAELDRAQEEAEKLAADLEKAEEEAERQKAENRR-LAAELE 1143

Query: 268  QNQRTFADEMSKLTILEKTREQ 289
            + Q       ++L   ++  E+
Sbjct: 1144 RAQEEAERLAAELERAQEEAER 1165



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/205 (11%), Positives = 71/205 (34%), Gaps = 7/205 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                       + ++++ +  R   + E+ A +    + +  + A E    Q        
Sbjct: 1137 RLAAELERAQEEAERLAAELERAQEEAERLAAELDRAQEEAEKLAAELERAQEEAEKLAA 1196

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                ++     +++     + +  R+ +      +LE        L +  +K     + L
Sbjct: 1197 ELDRAQEEAERLAAELEKAQEEAERLAA------ELEKTQEEAERLAAELEKAQEEAERL 1250

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
                  ++ D  +Q+    +   E+     E + +   + +  ++A  + A+  + ++ +
Sbjct: 1251 AADLEKAEEDAERQKAEKERLAAEVDRAQEEAEKLAADLEKAEEDAERQKADNER-LAAE 1309

Query: 266  LEQNQRTFADEMSKLTILEKTREQK 290
            L + Q       + L   E+  E++
Sbjct: 1310 LNRAQEEAERLAADLEKAEEDAERQ 1334



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/213 (10%), Positives = 71/213 (33%), Gaps = 9/213 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                       + ++++ +  R   + EK A D    + +   +  E+R         + 
Sbjct: 1088 RLAAELERAQEEAERLAAELDRAQEEAEKLAADLEKAEEEAERQKAENRRLAAELERAQE 1147

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMR--------SIYLNRLDLENKSSLLRALLSSHQK 197
             +                L  +L R +         +   + + E  ++ L       ++
Sbjct: 1148 EAERLAAELERAQEEAERLAAELDRAQEEAEKLAAELERAQEEAEKLAAELDRAQEEAER 1207

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                ++   E+      +L + +    +   EL +   E + +   + +  ++A  + A 
Sbjct: 1208 LAAELEKAQEEAERLAAELEKTQEEAERLAAELEKAQEEAERLAADLEKAEEDAERQKAE 1267

Query: 258  YLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              + ++ ++++ Q       + L   E+  E++
Sbjct: 1268 -KERLAAEVDRAQEEAEKLAADLEKAEEDAERQ 1299



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 67/213 (31%), Gaps = 4/213 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE----EQLLDF 141
                       + +K++ +  R   + EK A D    + D   +  ++R      + L  
Sbjct: 2103 RLAADLERAQEEAEKLAAELERAQEEAEKLAADLEKAEEDAERQKADNRRLAADNERLAA 2162

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              +     ++     +       + +      +       + ++  L A L   ++D   
Sbjct: 2163 ELERTQEEAEKLAADLEKAEEEAERQKADNERLAAELDRAQEEAEKLAADLEKAEEDAER 2222

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             K   E+ A   N   ++   +     +  E+   QK     +    + A  E      E
Sbjct: 2223 QKADNERLAAELNRAQEEAEKLAADLEKAEEDAERQKADNERLAAELNRAQEEAERLAAE 2282

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + R  E+ ++  AD        E+ +     L+
Sbjct: 2283 LERAQEEAEKLAADLEKAEEEAERQKADNEQLA 2315



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 59/197 (29%), Gaps = 4/197 (2%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                D ++++ +  R   + EK A D    + +   +  E+R         +  +     
Sbjct: 1627 RQKADKERLAAELDRAQEEAEKLAADLEKAEEEAERQKAENRRLAAELERAQEEAERLAA 1686

Query: 153  FNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                       L   L +        + D    ++    L +   +     + L      
Sbjct: 1687 ELDRAQEEAEKLAADLEKAEEDAERQKADNRRLAADNERLAAELDRAQEEAERLAADLEK 1746

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISRDLEQ 268
            ++ D  +Q+    +   EL     E + +   + +  +EA     E     +E  R    
Sbjct: 1747 AEEDAERQKADNERLAAELDRAQEEAERLAAELEKAQEEAERLAAELEKAQEEAERQKAD 1806

Query: 269  NQRTFADEMSKLTILEK 285
             +R  A+        EK
Sbjct: 1807 KERLAAELDRAQEEAEK 1823



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 61/201 (30%), Gaps = 11/201 (5%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             D ++++ +  R   + EK A D    + +   +  E+R         +  +        
Sbjct: 951  ADNERLAAELDRAQEEAEKLAADLEKAEEEAERQKAENRRLAAELERAQEEAERLAAELD 1010

Query: 156  GISSVYRSLKMKLTRMRSIYLNR--------LDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                    L   L +       +         +LE        L +   +     + L  
Sbjct: 1011 RAQEEAEKLAADLEKAEEKAERQKAENRRLAAELERAQEEAERLAAELDRAQEEAEKLAA 1070

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISR 264
                ++ +  +Q+    +   EL     E + +   ++   +EA     +     +E  R
Sbjct: 1071 DLEKAEEEAERQKAENRRLAAELERAQEEAERLAAELDRAQEEAEKLAADLEKAEEEAER 1130

Query: 265  DLEQNQRTFADEMSKLTILEK 285
               +N+R  A+        E+
Sbjct: 1131 QKAENRRLAAELERAQEEAER 1151



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 69/207 (33%), Gaps = 10/207 (4%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            E+       + ++++ +  R   + E+ A +    + +  + A +    +  +   +   
Sbjct: 1076 EEEAERQKAENRRLAAELERAQEEAERLAAELDRAQEEAEKLAAD---LEKAEEEAERQK 1132

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              ++     +       +     +         L  +    +        +L   +   E
Sbjct: 1133 AENRRLAAELERAQEEAERLAAELERAQEEAERLAAELDRAQEEAEKLAAELERAQEEAE 1192

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            K A    +L++ +    +   EL +   E + +   + +  +EA         E+ +  E
Sbjct: 1193 KLAA---ELDRAQEEAERLAAELEKAQEEAERLAAELEKTQEEAE----RLAAELEKAQE 1245

Query: 268  QNQRTFADEMSKLTILEKTREQKTILS 294
            + +R  AD        E+ + +K  L+
Sbjct: 1246 EAERLAADLEKAEEDAERQKAEKERLA 1272



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 67/204 (32%), Gaps = 6/204 (2%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +               + L   ++  +   + L    +  E+  E ++        +   
Sbjct: 2142 DAERQKADNRRLAADNERLAAELERTQEEAEKLAADLEKAEEEAERQKADNERLAAELDR 2201

Query: 148  TCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               +       +       + +      +       + ++  L A L   ++D    K  
Sbjct: 2202 AQEEAEKLAADLEKAEEDAERQKADNERLAAELNRAQEEAEKLAADLEKAEEDAERQKAD 2261

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             E+ A    +LN+ +    +   EL     E + +   + +  +EA  + A+  ++++ +
Sbjct: 2262 NERLAA---ELNRAQEEAERLAAELERAQEEAEKLAADLEKAEEEAERQKAD-NEQLAAE 2317

Query: 266  LEQNQRTFADEMSKLTILEKTREQ 289
            L + Q       ++L   ++  E+
Sbjct: 2318 LNRAQEEAEKLAAELEKAQEEAEK 2341



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/211 (11%), Positives = 64/211 (30%), Gaps = 7/211 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL-EKAFESREEQLLDFLGK 144
                       + ++++ +  R   + EK A D    + +   +KA   +    L+   +
Sbjct: 2264 RLAAELNRAQEEAERLAAELERAQEEAEKLAADLEKAEEEAERQKADNEQLAAELNRAQE 2323

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 +           +               + D E  ++ L       +K    ++ 
Sbjct: 2324 EAEKLAAELEKAQEEAEKLAADLEKAEEEAERQKADNERLAAELNRAQEEAEKLAAELEK 2383

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL------EFANY 258
              E+      +L + +    +   EL     E + +   +    +EA             
Sbjct: 2384 AQEEAERLAAELEKAQEEAERLAAELNRAQEEAERLAAELERAQEEAERLAAELDRAQEE 2443

Query: 259  LKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             + ++ +LE+ Q       ++L   ++  E+
Sbjct: 2444 AERLAAELERAQEEAERLAAELNRAQEEAEK 2474



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/198 (9%), Positives = 68/198 (34%), Gaps = 3/198 (1%)

Query: 100  KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            +++ +  R   + E+ A +      +  + A +  + +      K  +      N  +++
Sbjct: 899  RLAAELERAQEEAERLAAELDRALEEAEKLAADLEKAEEEAERQKAENRRLAADNERLAA 958

Query: 160  VYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                 + +  ++ + +     + E + +  R L +  ++     + L  +   +Q +  +
Sbjct: 959  ELDRAQEEAEKLAADLEKAEEEAERQKAENRRLAAELERAQEEAERLAAELDRAQEEAEK 1018

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQRTFADE 276
                + K+  +      E + +   +    +EA    A  +  +E +  L  +     +E
Sbjct: 1019 LAADLEKAEEKAERQKAENRRLAAELERAQEEAERLAAELDRAQEEAEKLAADLEKAEEE 1078

Query: 277  MSKLTILEKTREQKTILS 294
              +     +    +   +
Sbjct: 1079 AERQKAENRRLAAELERA 1096



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 61/198 (30%), Gaps = 2/198 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL-EKAFESREEQLLDFLGKYHSTCSK 151
                D ++++ +  R   + EK A D    + D   +KA   R    L+   +     + 
Sbjct: 2222 RQKADNERLAAELNRAQEEAEKLAADLEKAEEDAERQKADNERLAAELNRAQEEAERLAA 2281

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                      +               + D E  ++ L       +K    ++   E+   
Sbjct: 2282 ELERAQEEAEKLAADLEKAEEEAERQKADNEQLAAELNRAQEEAEKLAAELEKAQEEAEK 2341

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
               DL + E    +   +      E         +L  E   +     + ++ +LE+ Q 
Sbjct: 2342 LAADLEKAEEEAERQKADNERLAAELNRAQEEAEKLAAELE-KAQEEAERLAAELEKAQE 2400

Query: 272  TFADEMSKLTILEKTREQ 289
                  ++L   ++  E+
Sbjct: 2401 EAERLAAELNRAQEEAER 2418



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 70/210 (33%), Gaps = 9/210 (4%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE--------SREEQLL 139
            E+       D ++++ +  R   + EK A D    + D   +  +        +R ++  
Sbjct: 2182 EEEAERQKADNERLAAELDRAQEEAEKLAADLEKAEEDAERQKADNERLAAELNRAQEEA 2241

Query: 140  DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
            + L        +      +   R                 +LE        L +  +K  
Sbjct: 2242 EKLAADLEKAEEDAERQKADNERLAAELNRAQEEAERLAAELERAQEEAEKLAADLEKAE 2301

Query: 200  TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
               +     N     +LN+ +    K   EL +   E + +   + +  +EA  + A+  
Sbjct: 2302 EEAERQKADNEQLAAELNRAQEEAEKLAAELEKAQEEAEKLAADLEKAEEEAERQKADNE 2361

Query: 260  KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            + ++ +L + Q       ++L   ++  E+
Sbjct: 2362 R-LAAELNRAQEEAEKLAAELEKAQEEAER 2390



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 73/210 (34%), Gaps = 18/210 (8%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            ++ +    ++  +   K L   ++  +   + L  + +  ++  E     L     +  +
Sbjct: 1981 DNEQLAAELNRAQEEAKRLAADLERAQEEAEKLAAELERAQEEAEKLAADL--EKAEEDA 2038

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               K  N  +++    L  +L R       + + E  ++ L       ++     + L  
Sbjct: 2039 ERQKADNERLAADNERLAAELER------TQEEAEKLAADLEKAEEDAERQKADNEQLAA 2092

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISR 264
                   +LN+ +    +   +L     E + +   +    +EA     +     ++  R
Sbjct: 2093 -------ELNRAQEEAKRLAADLERAQEEAEKLAAELERAQEEAEKLAADLEKAEEDAER 2145

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILS 294
                N+R  AD       LE+T+E+   L+
Sbjct: 2146 QKADNRRLAADNERLAAELERTQEEAEKLA 2175



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 69/201 (34%), Gaps = 12/201 (5%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             D ++++ +  R   + E+ A D    + D   +  ++          +  +        
Sbjct: 1434 ADNERLAAELDRAQEEAERLAADLEKAEEDAERQKADNERLAAELDRAQEEAERLAAELE 1493

Query: 156  GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
                    L  +L + +       + E + +    L +   +     + L      ++ D
Sbjct: 1494 KAQEEAERLAAELEKAQE------EAERQKADKERLAAELDRAQEEAEKLAADLEKAEED 1547

Query: 216  LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK------EISRDLEQN 269
              +Q+    +   EL     E + +   + +  ++A  + A+  +       ++ +LE+ 
Sbjct: 1548 AERQKADNERLAAELNRAQEEAERLAADLEKAEEDAERQKADNRRLAADNERLAAELERA 1607

Query: 270  QRTFADEMSKLTILEKTREQK 290
            Q       ++L   ++  E++
Sbjct: 1608 QEEAERLAAELEKAQEEAERQ 1628



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 68/204 (33%), Gaps = 7/204 (3%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                + ++++ +  R   + EK A D    + +   +  ++          +  +     
Sbjct: 2558 KAQEEAERLAAELDRAQEEAEKLAADLEKAEEEAERQKADNERLAAELDRAQEEAERLAA 2617

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                       L  +L R +        +L+        L +  +K     +     N  
Sbjct: 2618 ELERAQEEAERLAAELDRAQEEAERLAAELDRAQEEAEKLAADLEKAEEEAERQKADNER 2677

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK------EISRD 265
               +LN+ +    +   EL +   E + +   + +  ++A  + A+  +       ++ +
Sbjct: 2678 LAAELNRAQEEAERLAAELEKAQEEAEKLAADLEKAEEDAERQKADNRRLAADNERLAAE 2737

Query: 266  LEQNQRTFADEMSKLTILEKTREQ 289
            L++ Q       ++L   ++  E+
Sbjct: 2738 LDRAQEEAERLAAELDRAQEEAER 2761



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 68/195 (34%), Gaps = 2/195 (1%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL-EKAFESREEQLLDFLGKYHSTCSKVFN 154
             D ++++ +  R   + E+ A +    + +   +KA + R    LD   +     +    
Sbjct: 1595 ADNERLAAELERAQEEAERLAAELEKAQEEAERQKADKERLAAELDRAQEEAEKLAADLE 1654

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   R           +   + + E  ++ L       +K    ++   E     + 
Sbjct: 1655 KAEEEAERQKAENRRLAAELERAQEEAERLAAELDRAQEEAEKLAADLEKAEEDAERQKA 1714

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            D  +      +   EL     E + +   + +  ++A  + A+  + ++ +L++ Q    
Sbjct: 1715 DNRRLAADNERLAAELDRAQEEAERLAADLEKAEEDAERQKADNER-LAAELDRAQEEAE 1773

Query: 275  DEMSKLTILEKTREQ 289
               ++L   ++  E+
Sbjct: 1774 RLAAELEKAQEEAER 1788



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 65/202 (32%), Gaps = 3/202 (1%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             D ++++ +  R   + EK A +    + +  + A +  + +      K H+        
Sbjct: 846  ADNERLAAELERAQEEAEKLAAELDRAQEEAEKLAADLEKAEEEAEKQKAHNERLAAELE 905

Query: 156  GISSVYRSLKMKLTR-MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                    L  +L R +        DLE          + +++     + L  +   +Q 
Sbjct: 906  RAQEEAERLAAELDRALEEAEKLAADLEKAEEEAERQKAENRRLAADNERLAAELDRAQE 965

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQRT 272
            +  +    + K+  E      E + +   +    +EA    A  +  +E +  L  +   
Sbjct: 966  EAEKLAADLEKAEEEAERQKAENRRLAAELERAQEEAERLAAELDRAQEEAEKLAADLEK 1025

Query: 273  FADEMSKLTILEKTREQKTILS 294
              ++  +     +    +   +
Sbjct: 1026 AEEKAERQKAENRRLAAELERA 1047



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 59/198 (29%), Gaps = 10/198 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE-SREEQLLDFLGKYH 146
            E+       D ++++ +  R   + EK A +    + +  + A +  + E+  +     +
Sbjct: 2301 EEEAERQKADNEQLAAELNRAQEEAEKLAAELEKAQEEAEKLAADLEKAEEEAERQKADN 2360

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               +   N       +                 +LE        L +   +     + L 
Sbjct: 2361 ERLAAELNRAQEEAEKLAAELEKAQEEAERLAAELEKAQEEAERLAAELNRAQEEAERLA 2420

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISR 264
                    +L + +    +   EL     E + +   +    +EA    A  N  +E + 
Sbjct: 2421 A-------ELERAQEEAERLAAELDRAQEEAERLAAELERAQEEAERLAAELNRAQEEAE 2473

Query: 265  DLEQNQRTFADEMSKLTI 282
             L  N     +E  +   
Sbjct: 2474 KLAANLEKAQEEAERQKA 2491



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 23/198 (11%), Positives = 73/198 (36%), Gaps = 2/198 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                D ++++ +  R   + EK A D    + +   +  ++R     +         ++ 
Sbjct: 1802 RQKADKERLAAELDRAQEEAEKLAADLEKAEEEAERQKADNRRLAADNERLAAELERAQE 1861

Query: 153  FNYGISSVYRSLKMKLTRMRS-IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                +++     + +  R+ + +   + + E  ++ L       ++     + L   N  
Sbjct: 1862 EAERLAAELERAQEEAERLAAEVDRAQEEAEQLAADLEKAEEEAERQKADNRRLAADNER 1921

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
               +L++ +    +   EL +   E + +   + +  +EA    A  L++   D E+ + 
Sbjct: 1922 LAAELDRAQEEAERLAAELEKAEEEAERLAAELEKAQEEAE-RLAADLEKAEEDAERQKA 1980

Query: 272  TFADEMSKLTILEKTREQ 289
                  ++L   ++  ++
Sbjct: 1981 DNEQLAAELNRAQEEAKR 1998



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 73/220 (33%), Gaps = 11/220 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                       + ++++ +  R   + E+ A +    + +  + A +  + +      K 
Sbjct: 1851 RLAAELERAQEEAERLAAELERAQEEAERLAAEVDRAQEEAEQLAADLEKAEEEAERQKA 1910

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             +      N  +++     + +  R+ +      +   + +          + L      
Sbjct: 1911 DNRRLAADNERLAAELDRAQEEAERLAAELEKAEEEAERLAAELEKAQEEAERLAADLEK 1970

Query: 206  FEKNAVSQ--------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LE 254
             E++A  Q         +LN+ +    +   +L     E + +   +    +EA     +
Sbjct: 1971 AEEDAERQKADNEQLAAELNRAQEEAKRLAADLERAQEEAEKLAAELERAQEEAEKLAAD 2030

Query: 255  FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                 ++  R    N+R  AD       LE+T+E+   L+
Sbjct: 2031 LEKAEEDAERQKADNERLAADNERLAAELERTQEEAEKLA 2070



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 66/205 (32%), Gaps = 7/205 (3%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL-EKAFESREEQLLDFLGKYHSTCSK 151
                + ++++ +  R   + EK A D    + D   +KA   R    L+   +     + 
Sbjct: 1263 RQKAEKERLAAEVDRAQEEAEKLAADLEKAEEDAERQKADNERLAAELNRAQEEAERLAA 1322

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                      R                 +LE        L +   +     + L      
Sbjct: 1323 DLEKAEEDAERQKADNRRLAADNERLAAELERAQEEAERLAAELDRAQEEAERLAADLEK 1382

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK------EISRD 265
            ++ D  +Q+    +   EL     E + +   + +  ++A  + A+  +       ++ +
Sbjct: 1383 AEEDAERQKADNERLAAELDRAQEEAEKLAADLEKAEEDAERQKADNERLAADNERLAAE 1442

Query: 266  LEQNQRTFADEMSKLTILEKTREQK 290
            L++ Q       + L   E+  E++
Sbjct: 1443 LDRAQEEAERLAADLEKAEEDAERQ 1467



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/213 (10%), Positives = 63/213 (29%), Gaps = 12/213 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE----SREEQLLDF 141
                       + +K++ +  R   + EK A D    + D   +  +    + + + L  
Sbjct: 1998 RLAADLERAQEEAEKLAAELERAQEEAEKLAADLEKAEEDAERQKADNERLAADNERLAA 2057

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              +     ++     +       + +      +       + ++  L A L   Q++   
Sbjct: 2058 ELERTQEEAEKLAADLEKAEEDAERQKADNEQLAAELNRAQEEAKRLAADLERAQEE--- 2114

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
                  +   ++ +  Q+E     + LE  E   E++          +E         +E
Sbjct: 2115 -----AEKLAAELERAQEEAEKLAADLEKAEEDAERQKADNRRLAADNERLAAELERTQE 2169

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             +  L  +     +E  +     +    +   +
Sbjct: 2170 EAEKLAADLEKAEEEAERQKADNERLAAELDRA 2202



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 62/204 (30%), Gaps = 4/204 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEK-SALDFLNNKYDVLEKAFESREEQLLDFLGK 144
                       + +K++ +  R   + EK +A      +    +KA   R    L+   +
Sbjct: 850  RLAAELERAQEEAEKLAAELDRAQEEAEKLAADLEKAEEEAEKQKAHNERLAAELERAQE 909

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 +   +  +    +               + +    ++    L +   +     + 
Sbjct: 910  EAERLAAELDRALEEAEKLAADLEKAEEEAERQKAENRRLAADNERLAAELDRAQEEAEK 969

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKE 261
            L      ++ +  +Q+    +   EL     E + +   ++   +EA     +     ++
Sbjct: 970  LAADLEKAEEEAERQKAENRRLAAELERAQEEAERLAAELDRAQEEAEKLAADLEKAEEK 1029

Query: 262  ISRDLEQNQRTFADEMSKLTILEK 285
              R   +N+R  A+        E+
Sbjct: 1030 AERQKAENRRLAAELERAQEEAER 1053



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 59/196 (30%), Gaps = 2/196 (1%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             D ++++ +  R   + E+ A +    + +    A E    Q            ++    
Sbjct: 1847 ADNERLAAELERAQEEAERLAAELERAQEEAERLAAEVDRAQEEAEQLAADLEKAEEEAE 1906

Query: 156  GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-N 214
               +  R L     R+ +      +   + +          + L       ++ A     
Sbjct: 1907 RQKADNRRLAADNERLAAELDRAQEEAERLAAELEKAEEEAERLAAELEKAQEEAERLAA 1966

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            DL + E    +   +  +   E          L  +         ++++ +LE+ Q    
Sbjct: 1967 DLEKAEEDAERQKADNEQLAAELNRAQEEAKRLAADLE-RAQEEAEKLAAELERAQEEAE 2025

Query: 275  DEMSKLTILEKTREQK 290
               + L   E+  E++
Sbjct: 2026 KLAADLEKAEEDAERQ 2041



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 55/190 (28%), Gaps = 3/190 (1%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             D ++++ +  R   + E+ A +    + +    A E  + Q            ++    
Sbjct: 1917 ADNERLAAELDRAQEEAERLAAELEKAEEEAERLAAELEKAQEEAERLAADLEKAEEDAE 1976

Query: 156  GISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               +    L  +L R +        DLE        L +  ++     + L      ++ 
Sbjct: 1977 RQKADNEQLAAELNRAQEEAKRLAADLERAQEEAEKLAAELERAQEEAEKLAADLEKAEE 2036

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLKEISRDLEQNQRT 272
            D  +Q+    +   +      E +             E   E A   K  +  L      
Sbjct: 2037 DAERQKADNERLAADNERLAAELERTQEEAEKLAADLEKAEEDAERQKADNEQLAAELNR 2096

Query: 273  FADEMSKLTI 282
              +E  +L  
Sbjct: 2097 AQEEAKRLAA 2106



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/212 (9%), Positives = 71/212 (33%), Gaps = 9/212 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
                       + ++++ +  R   + E+ A +    + +    A E    Q        
Sbjct: 2418 RLAAELERAQEEAERLAAELDRAQEEAERLAAELERAQEEAERLAAELNRAQEEAEKLAA 2477

Query: 146  HSTCSKVFNYGISS--------VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            +   ++       +        + R+ +        +   + + E  ++ L       ++
Sbjct: 2478 NLEKAQEEAERQKAHNERLAAELERAREEAERLAAELEKAQEEAERLAAELEKAREEAER 2537

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                ++   E+      +L + +    +   EL     E + +   + +  +EA  + A+
Sbjct: 2538 LAAELERAREEAERLAAELEKAQEEAERLAAELDRAQEEAEKLAADLEKAEEEAERQKAD 2597

Query: 258  YLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
              + ++ +L++ Q       ++L   ++  E+
Sbjct: 2598 NER-LAAELDRAQEEAERLAAELERAQEEAER 2628



 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 52/170 (30%), Gaps = 9/170 (5%)

Query: 122  NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR-LD 180
             + +    A E    Q            ++       +    L  +L R +        +
Sbjct: 2559 AQEEAERLAAELDRAQEEAEKLAADLEKAEEEAERQKADNERLAAELDRAQEEAERLAAE 2618

Query: 181  LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            LE        L +   +     + L  +   +Q +  +    + K+  E      + + +
Sbjct: 2619 LERAQEEAERLAAELDRAQEEAERLAAELDRAQEEAEKLAADLEKAEEEAERQKADNERL 2678

Query: 241  LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
               +N   +EA          ++ +LE+ Q       + L   E+  E++
Sbjct: 2679 AAELNRAQEEAE--------RLAAELEKAQEEAEKLAADLEKAEEDAERQ 2720


>gi|26108853|gb|AAN81056.1|AE016763_15 Hypothetical protein yegM precursor [Escherichia coli CFT073]
          Length = 464

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 113 AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 170

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 226

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 227 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 259



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 230

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 231 DEASVASAQLQLD 243


>gi|325135865|gb|EGC58477.1| chromosome segregation protein SMC [Neisseria meningitidis M0579]
          Length = 1161

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 70/204 (34%), Gaps = 11/204 (5%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +     +  +K+ R H+       + L  + + LEK  E+ E        + +     +
Sbjct: 174 KERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAER-YKSLTAQLNRQQDLL 232

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR----ALLSSHQKDLTMMKNLFEK 208
                     +      + +S+   + +   +   L     AL ++ Q     +  L  K
Sbjct: 233 DYAQWQQSLAAADKATEQHQSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELSNK 292

Query: 209 NAVSQNDLNQQE---RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN---YLKEI 262
             V +  + + E   R        +  +    +  ++ I++   +  ++      Y++E 
Sbjct: 293 RGVLREQIARLEEQIRHQQNLHQRIERDKQAAQAQMQRIHQEQQQIRVQLEENELYVEEK 352

Query: 263 SRDLEQNQRTFADEMSKLTILEKT 286
             +L +     A+   +L  LE+T
Sbjct: 353 QTELAEWAMQVAEHEERLPELEET 376


>gi|301762656|ref|XP_002916760.1| PREDICTED: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase
            beta-3-like [Ailuropoda melanoleuca]
          Length = 1208

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/207 (10%), Positives = 76/207 (36%), Gaps = 5/207 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHID-TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            +   L       +   R      ++  +   + +    EK  E    +  +F  +   + 
Sbjct: 957  KAVALTRRLLDGLAQARAEGRCRQRPGVLGSSYRSGENEKEEEEEVRRYQEFQKRQVQSL 1016

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK- 208
             ++      +        L + +      + L+  ++  + L   ++++   ++ + ++ 
Sbjct: 1017 LELREAQADTEAERRLEHLRQAQQRLREIV-LDFHTTQFKRLKEMNEREKKELQKILDRK 1075

Query: 209  --NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              N++S+    ++ +   + T   R +I E  N +R + E   + +       +++ + L
Sbjct: 1076 RHNSISEAKTREKHKKEAELTEINRRHITESVNSIRRLEEAQKQRHERLVAGQQQVLQQL 1135

Query: 267  EQNQRTFADEMSKLTILEKTREQKTIL 293
             + +     ++++    ++ R  + I 
Sbjct: 1136 AEEEPKLLAQLAQECQEQRARLPQEIR 1162


>gi|261757109|ref|ZP_06000818.1| acriflavin resistance protein A [Brucella sp. F5/99]
 gi|261737093|gb|EEY25089.1| acriflavin resistance protein A [Brucella sp. F5/99]
          Length = 346

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 115 RIDDVEQRANMRVAQASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 174

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 175 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 233

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 234 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 281



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 76  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 128

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + S+      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 129 QASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 188

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 189 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 245

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 246 IGMGVTVALLADPSIEAEGNIRELS 270


>gi|261868022|ref|YP_003255944.1| AcrA protein [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|261413354|gb|ACX82725.1| AcrA protein [Aggregatibacter actinomycetemcomitans D11S-1]
          Length = 319

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 51/140 (36%), Gaps = 6/140 (4%)

Query: 23  LSIIGIIGLITWSIL----LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
             IIG +G   W         +    + +G +  E   ++I + + G +++  V+ G+++
Sbjct: 10  FIIIGAVGFAIWKNRQLQASELNGIAAVNGRL--ELKRLDIATLYPGRVEEILVQEGNEV 67

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +  PL       +   +   +   K     +    S +D    + +V +    + ++  
Sbjct: 68  KRNQPLARLSSSISQAQVSAAQAQKKRAEESVARALSEIDARQQQVNVTKLELNNAQKLR 127

Query: 139 LDFLGKYHSTCSKVFNYGIS 158
           LD L        +   Y  S
Sbjct: 128 LDNLISSSELERRQAAYKAS 147


>gi|33152562|ref|NP_873915.1| putative RND efflux membrane fusion protein [Haemophilus ducreyi
           35000HP]
 gi|33148786|gb|AAP96304.1| putative RND efflux membrane fusion protein [Haemophilus ducreyi
           35000HP]
          Length = 438

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 66/199 (33%), Gaps = 23/199 (11%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++  L   E         L  +  +  N    ++        + A+       +L++ Q
Sbjct: 127 VTRGQLL-IELDSSVEQATLHASESQLPNAKATLSRYRSLVASKSAS-----KAELDKAQ 180

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            T+   ++ +  L+   +++ I +P  G +   +      Y   +  +++ V  S    +
Sbjct: 181 ATYNQLVANIESLKAAIKRRQIYAPFDGIVGIVKVN-LGEYITAATEIVR-VEDSSQMKV 238

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V    +  +  G           +     F+A +  ID  +++            V 
Sbjct: 239 SFNVPQTNLADITIGQRVAFSVDAIPNQT---FEAKVSAIDSAVTKSTG--------LVA 287

Query: 391 LKITDLAFSDNNIELRNGF 409
           ++    A  D   +L +G 
Sbjct: 288 VE----AVVDGRGQLMSGM 302



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 54/145 (37%), Gaps = 1/145 (0%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G I   +N   + +  +G +    +++G ++ +G  L+  +       +   +  
Sbjct: 93  VIKAVGTIRP-NNGAMLSAQAAGSVTAIHIKSGERVTRGQLLIELDSSVEQATLHASESQ 151

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           + N +  +   +S +   +     L+KA  +  + + +      +   +        +  
Sbjct: 152 LPNAKATLSRYRSLVASKSASKAELDKAQATYNQLVANIESLKAAIKRRQIYAPFDGIVG 211

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSL 187
            +K+ L    +     + +E+ S +
Sbjct: 212 IVKVNLGEYITAATEIVRVEDSSQM 236


>gi|331642694|ref|ZP_08343829.1| multidrug resistance protein MdtA (Multidrug transportermdtA)
           [Escherichia coli H736]
 gi|331039492|gb|EGI11712.1| multidrug resistance protein MdtA (Multidrug transportermdtA)
           [Escherichia coli H736]
          Length = 464

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 113 AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 170

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 226

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 227 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 259



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 230

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 231 DEASVASAQLQLD 243


>gi|323494057|ref|ZP_08099173.1| membrane-fusion protein [Vibrio brasiliensis LMG 20546]
 gi|323311684|gb|EGA64832.1| membrane-fusion protein [Vibrio brasiliensis LMG 20546]
          Length = 377

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 73/193 (37%), Gaps = 16/193 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G I+   + V IKS   GI+ +   + G ++ QG  L+      T   +   
Sbjct: 42  IEKQAVAVGSIVPA-HSVSIKSQIDGIVGEIYADVGEKVSQGQALIKVRPNPTPQALTDA 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
              +      +++EK  L   N +  V ++   S  +  +       S  + V     + 
Sbjct: 101 STELMRSEADLESEKQKLA--NLESLVKQEIIPSNYDAYVTARSAVKSAQANVLQKRQNL 158

Query: 159 SVYRSLKMKLTRMR-----------SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLF 206
            + RS +  +   R           ++   ++++ E   S   +  ++    L  M +L 
Sbjct: 159 ELIRSGEALIGGSRLTSTIYAPIDGTVLNRKVEVGEPIISTESSQAATEMMSLADMNSLI 218

Query: 207 EKNAVSQNDLNQQ 219
            K +VS++D  Q 
Sbjct: 219 FKGSVSEHDAAQL 231



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 76/214 (35%), Gaps = 20/214 (9%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           +  R       E ++  + +  + + I     +A +   + +K    ++ Q ++      
Sbjct: 103 ELMRSEADLESEKQKLANLESLVKQEIIPSNYDAYVTARSAVKSAQANVLQKRQNLELIR 162

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHSKLTYIR 331
           S   ++  +R   TI +PI GT++  +              Q +  +M +         +
Sbjct: 163 SGEALIGGSRLTSTIYAPIDGTVLNRKV-EVGEPIISTESSQAATEMMSLA-DMNSLIFK 220

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNNLQTQEY-- 386
             V+      +  G    +    Y ++   + + ++ K+      +++  +N  T+ +  
Sbjct: 221 GSVSEHDAAQLSTGMKVLLTVAPYPEV---EIEGVLTKVAIQSENLNETQSNSNTKSFDN 277

Query: 387 -YEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + V +           I LR+GF +    T K 
Sbjct: 278 GFGVEV---GKLKIPQGILLRSGFSSTAHITLKK 308


>gi|307721247|ref|YP_003892387.1| efflux transporter, RND family, MFP subunit [Sulfurimonas
           autotrophica DSM 16294]
 gi|306979340|gb|ADN09375.1| efflux transporter, RND family, MFP subunit [Sulfurimonas
           autotrophica DSM 16294]
          Length = 379

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 3/157 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   V   GE+    N+  I +   G I +   + G  + +G  L   + ++   LI+  
Sbjct: 42  LNKEVFGIGEV-GAKNIYTINAQTGGKILQITTDEGKWVKKGDLLAVIDAVDLPQLIEEA 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K+S+      +   +  LD L     VL K    R ++L +      S   K     + +
Sbjct: 101 KMSVYKADSELQATQKELDSL-FAQKVLAKLTYDRYKKLKEKAFVSQSEYDKA-KADLDT 158

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +  ++K     + S     + L+     L   LS ++
Sbjct: 159 IRANIKAIQAHIDSSKTEVVRLQKSLEALSVKLSRYK 195



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 86/262 (32%), Gaps = 53/262 (20%)

Query: 164 LKMKLTRMR-SIYLNRLDLENKSSLLRALLSSH---QKDLTMMKNLFEKNAVSQNDLNQQ 219
           L   +   + S+Y    +L+     L +L +     +      K L EK  VSQ++ ++ 
Sbjct: 93  LPQLIEEAKMSVYKADSELQATQKELDSLFAQKVLAKLTYDRYKKLKEKAFVSQSEYDKA 152

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
                      + ++   +  ++ I    D +  E     K                   
Sbjct: 153 -----------KADLDTIRANIKAIQAHIDSSKTEVVRLQK------------------S 183

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           L  L     +  I +P+ G ++   +  + + A   QP++K+V   K  +I+A +  K  
Sbjct: 184 LEALSVKLSRYKIYAPVDGYVISKDAEVAQSVAGT-QPILKVV-DPKTVWIKAYIDEKIS 241

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             VK G  A +          KK    + +I           +            D++F 
Sbjct: 242 GDVKVGQRAVITL---RSQSNKKLSGHVSRIVAQSDAVTQEREV-----------DVSFD 287

Query: 400 DNNIELRNGF--PAEVLFTAKN 419
            + I         AEVL   + 
Sbjct: 288 KSPIPFY--MNEQAEVLIMTER 307


>gi|307296261|ref|ZP_07576088.1| secretion protein HlyD family protein [Sphingobium chlorophenolicum
           L-1]
 gi|306878063|gb|EFN09286.1| secretion protein HlyD family protein [Sphingobium chlorophenolicum
           L-1]
          Length = 300

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 59/205 (28%), Gaps = 16/205 (7%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   +           R         +L      ++    +   Q   A+ MS   
Sbjct: 86  AVEQAEARIASAKATLGQARREATRDIALGDLVAKEAHEQNVARVATAQAALAEAMSARD 145

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  +++ + G +         ++    Q  M +V       +       ++  
Sbjct: 146 AAALNLKRTQVVASVNGVVTNLDLH-PGDFVAAGQQAMALV-DRDSLRVEGYFEETKLPL 203

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN--LQTQEYY---------EVI 390
           V  G   TVR    A     +  +I   I+        N     +  +          V 
Sbjct: 204 VCIGAPVTVRLMGEAQDLHGRVDSIAYGINDSSRSDSGNLLPTVEPTFSWVRLAQRIPVR 263

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF 415
           +K+T +     +++L  G  A V  
Sbjct: 264 VKLTRI---PADVKLIAGRTATVTI 285



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/83 (10%), Positives = 26/83 (31%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV +     G++    V +   +  G  L   +       ++  +  I + +  + 
Sbjct: 43  VRADVVRVTPDIGGLVTSVAVHDNQAVKAGDLLFVIDRPRYALAVEQAEARIASAKATLG 102

Query: 112 TEKSALDFLNNKYDVLEKAFESR 134
             +          D++ K    +
Sbjct: 103 QARREATRDIALGDLVAKEAHEQ 125


>gi|306844256|ref|ZP_07476848.1| HlyD family secretion protein [Brucella sp. BO1]
 gi|306275328|gb|EFM57069.1| HlyD family secretion protein [Brucella sp. BO1]
          Length = 355

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 2/120 (1%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +   S +G +   +  +  KSP  G I++     GS +  G  L   +  +        K
Sbjct: 35  DGIASGNGRVEAVEIDISTKSP--GRIREIFANEGSFVKAGDVLARMDTDQLESQHRQAK 92

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++     IDT +S +     ++   E     RE QL     +   +     +  +S  
Sbjct: 93  AQLRRAEIGIDTAQSLVTQRQAEHAAAEATVAQREAQLDAAQRRLVRSRQLSESRTVSQQ 152


>gi|254451621|ref|ZP_05065058.1| efflux transporter, RND family, MFP subunit, putative
           [Octadecabacter antarcticus 238]
 gi|198266027|gb|EDY90297.1| efflux transporter, RND family, MFP subunit, putative
           [Octadecabacter antarcticus 238]
          Length = 329

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 72/210 (34%), Gaps = 26/210 (12%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           +  F++  +    L+        +  +   N    +  L  I     E  L   +  +  
Sbjct: 15  RGSFQQGDI-LVRLDDSAERATLTQTQANINATLARLDLNRILLERTETLLARGSASQSA 73

Query: 263 SRDLEQNQRTFADEMSKL----TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL 318
              ++  Q   +  ++ L    ++ E   ++K +++P  G ++  Q           Q +
Sbjct: 74  LDQVKSTQEELSANLNSLIATQSVAEVGLDRKLVIAPFDGAVLSMQV-EIGTVINGGQTI 132

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGY--------TATVRFPHYADIREKKFKAIIEKI 370
            +I        I   +       +  G         T +VRF      +  ++ A + ++
Sbjct: 133 AEIF-TQDRMEIDVPIRGADAALI-PGLFEGGSPSATVSVRFAG----QTFEWDAQVSRV 186

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            P ++ +   L       V +++TD+A + 
Sbjct: 187 SPTLNARTRTLT------VTVELTDIADAR 210


>gi|194433160|ref|ZP_03065442.1| macrolide-specific efflux protein MacA [Shigella dysenteriae 1012]
 gi|194418657|gb|EDX34744.1| macrolide-specific efflux protein MacA [Shigella dysenteriae 1012]
          Length = 371

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLKAGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 283 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 321



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++  LR      ++ L      Y   ++  +++     D      +T   V    I +
Sbjct: 105 EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDL--DTAATEMAVKQAQIGT 162

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +K     + +   N
Sbjct: 163 IDAQIKRNQASLDTAKTN 180


>gi|170691193|ref|ZP_02882359.1| efflux transporter, RND family, MFP subunit [Burkholderia graminis
           C4D1M]
 gi|170144442|gb|EDT12604.1| efflux transporter, RND family, MFP subunit [Burkholderia graminis
           C4D1M]
          Length = 341

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 72/211 (34%), Gaps = 23/211 (10%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDE-------ANLEFANYLKEISRDLEQNQRTFADE 276
            +  L LR+     +     +++   E        NL  A   +E    ++Q +   AD 
Sbjct: 101 ARYALALRQAQATAQQRRATLDQARREDVRNRKLGNLVAAEVAEESRSRVDQAEAALADA 160

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
              +   +   ++ TI+SP+ G  + +++  +  +    + ++ +V       +      
Sbjct: 161 NVAIDTAKLNLQRATIVSPVDGY-LNDRAPRAGEFVAAGRAVLSVV-DMHSFRVDGYFEE 218

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-DPIISQQDNNL----------QTQE 385
            ++  +  G    +       +     ++I+  I D   +Q  N L          +  +
Sbjct: 219 TKLGGIHIGQPVDISVMGEPQVLRGHVQSIVAGIEDRDRTQGTNLLPNVNPAFSWVRLAQ 278

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              V + + ++     +  +  G  A V   
Sbjct: 279 RIPVRVALDEV---PPDFRMIAGRTATVSVR 306



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 47/147 (31%), Gaps = 12/147 (8%)

Query: 17  LKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
              + L  +IG      W+     +  V +        +V+++    SG+I    V +  
Sbjct: 40  AAALVLWKLIGYYMFAPWTR----DGHVRA--------DVIQVAPDVSGLISSVDVVDNQ 87

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           Q+ QG  L   +       +   + + +  R  +D  +          +++         
Sbjct: 88  QVRQGQVLFVIDHARYALALRQAQATAQQRRATLDQARREDVRNRKLGNLVAAEVAEESR 147

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRS 163
             +D      +  +   +    ++ R+
Sbjct: 148 SRVDQAEAALADANVAIDTAKLNLQRA 174


>gi|221068844|ref|ZP_03544949.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
 gi|220713867|gb|EED69235.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           KF-1]
          Length = 377

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 73/217 (33%), Gaps = 31/217 (14%)

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           D   M N+    A +Q  +   +R   +  L L  +I  +K+        Y+ A LE A 
Sbjct: 119 DSADMANVRADQAKAQAAMIHAQREADRQKLLLEADIAPRKD--------YEAAELELAR 170

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-SQ 316
                  D+       A   +        R    + SPI G +V     +   Y    ++
Sbjct: 171 ----ARADMAAVTAHLAQMGAPAKG--SGRGNYVLRSPINGRVVEMNG-AQGGYWNDINE 223

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            +M  V      ++ A V  + +  +  G  A +    Y +      +  +  +  ++  
Sbjct: 224 SVMT-VADLSTVWLSASVAERDLASISVGQNAHIILNAYPNQ---PLQGKVRYVGELLDL 279

Query: 377 QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           +   +      +V + +      + +  L  G  A+V
Sbjct: 280 ETRTV------KVRVAVD-----NQDGRLLPGMFAQV 305



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 2/124 (1%)

Query: 37  LLPIEISVSSSGEILNE-DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           L  +   V++   I    + +V++  P  G + +     G  +  G PL   +  +    
Sbjct: 67  LADLSTPVTAPASIEAAPEKLVKLAPPLPGRLVQIHRVLGDTVHLGDPLFAMDSADM-AN 125

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   +   +    H   E      L        K +E+ E +L        +  + +   
Sbjct: 126 VRADQAKAQAAMIHAQREADRQKLLLEADIAPRKDYEAAELELARARADMAAVTAHLAQM 185

Query: 156 GISS 159
           G  +
Sbjct: 186 GAPA 189


>gi|148654358|ref|YP_001274563.1| secretion protein HlyD family protein [Roseiflexus sp. RS-1]
 gi|148566468|gb|ABQ88613.1| secretion protein HlyD family protein [Roseiflexus sp. RS-1]
          Length = 514

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/399 (11%), Positives = 124/399 (31%), Gaps = 66/399 (16%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K   V+    + QG  L   E  +  + +   +V+++  +  ++  K+  D    + 
Sbjct: 79  GFLKVLYVDRNDPVKQGQLLAELEMGDLPNQLRQAEVALEQAQLVLNRSKAQRDAAIRRA 138

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++  +  +++  +L +         ++       +    ++   +  ++     + L   
Sbjct: 139 ELDLEEAQAQLRRLQEPPDPLELARAQANLAQAQANLEQVRTNASAEKT--RAEIALAQA 196

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQN-DLNQQERIVYKSTLELRENIHEQKNMLRH 243
           S+ L A+ +++ + LT   ++ +K    Q+   N  +    ++  ELR      +     
Sbjct: 197 SNALPAVQTAYLRALTEWNDIRDK---PQDWRYNAVKEAFERAEAELRNAEMAVRQAQLA 253

Query: 244 INELYD-----------------------------------EANLEFANYLKEISRDL-- 266
            ++                                        N+E A    + +R +  
Sbjct: 254 YDQARQNEGPAIARAEALLAEAQAAYDALVRGPKPEDLERARRNVERARIAVDEARQVGD 313

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV------YNQSFSSSNYAQQSQPLMK 320
            + +   A    ++  L+   E   + +P  G +        +Q  +             
Sbjct: 314 SELEGRVASAQLEVERLKAQMEAMRLYAPFDGKVAAVGNKPGDQITAYRAVITVMDD--- 370

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
                K   +   V  +    +  G    + F        + F  ++ K+   ++     
Sbjct: 371 ---TGKELLVE-NVASQDATRIGLGQQVQITFS---RAPGRVFNGVVTKLPTTLTSSAAT 423

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +     Y        + F    + L  G  A+V+ T K 
Sbjct: 424 INPDRAY-------HIDFEAPGVNLEVGDLAQVVITLKR 455


>gi|91072936|gb|ABE07817.1| hypothetical protein YegM precursor [Escherichia coli UTI89]
          Length = 464

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 113 AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 170

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L    ++Y  L K      ++L         T  
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDL----SRYQQLAKTNLVSRQELDAQQALVSETEG 226

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 227 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 259



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 61/165 (36%), Gaps = 27/165 (16%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL+  + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDLSRYQQLAKTNLVSRQELDAQQALVSETEGTIKA 230

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +     +    ++     A ++    LK++            D  ++++  +        
Sbjct: 231 DEASVASAQLQLDWSRITAPVDGRVGLKQV------------DVGNQISSGD-------- 270

Query: 293 LSPIAGTIVYNQSFSSSNYAQ-QSQPLMKIV---PHSKLTYIRAK 333
                G +V  Q+             +  +V      K   + A+
Sbjct: 271 ---TTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAR 312


>gi|32475935|ref|NP_868929.1| multidrug resistance efflux pump [Rhodopirellula baltica SH 1]
 gi|32446478|emb|CAD76314.1| conserved hypothetical protein-putative multidrug resistance efflux
           pump [Rhodopirellula baltica SH 1]
          Length = 397

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/325 (13%), Positives = 93/325 (28%), Gaps = 47/325 (14%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K A+          + +   R +++             +F         ++++    +  
Sbjct: 79  KQAIVIAQIDPITAQLSTNGRVKEVFVSPNVPIQAGDVLFTVDPIPYENAVEVAKAGLEQ 138

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLT-------MMKNLFEKNAVSQNDLNQQERIVYKS 226
              N    E+   L RA L   + DLT         + L E    SQ++L +   +  +S
Sbjct: 139 AKQNVQLSESTVELSRATLVRAKADLTYATNDRDRYQKLRESGGASQDELERAVTLFQQS 198

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              L +   EQ      I+    +A    A                       L   E  
Sbjct: 199 DAALTQ--AEQSLKQAGISVGVAKAKQTQAETT--------------------LANAEYD 236

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKL----TYIRAKVTPKQIQH 341
            +Q T+ +P  G +   Q          +  P+M  +  +        +   V  K    
Sbjct: 237 LQQTTVKAPADGYVTNLQVH-PGMLLGPATGPVMSFIRDTDERQKGVVVAVFVE-KNFLR 294

Query: 342 VKKGYTATVRFPHYA-DIREKK------FKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           ++    A +    Y  +I   +           + +   +   D        + V +++ 
Sbjct: 295 IRTDQYAELAMDAYPGEILTGRVLNSINVSGKGQLVAGGMVPTDLADGKPTQFAVRIQLD 354

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
           D+    ++  L  G   +      +
Sbjct: 355 DV----DSYPLPGGAQGQAAVYTGD 375



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 67/222 (30%), Gaps = 35/222 (15%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEI-----------SVSSSGEILN-----------E 53
           S + +    + G+   I W +   +++           +    G I+             
Sbjct: 19  SRRIVMSWILGGVYCGIIWLVFAKLKLMRLSLPLAIILASVGPGLIVVLLFCAQYFHPYT 78

Query: 54  DNVVEI--------KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
              + I        +   +G +K+  V     I  G  L T + I   + +++ K  ++ 
Sbjct: 79  KQAIVIAQIDPITAQLSTNGRVKEVFVSPNVPIQAGDVLFTVDPIPYENAVEVAKAGLEQ 138

Query: 106 LRCHID-----TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            + ++       E S    +  K D+     +    Q L   G       +         
Sbjct: 139 AKQNVQLSESTVELSRATLVRAKADLTYATNDRDRYQKLRESGGASQDELERAVTLFQQS 198

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +L      ++   ++    + K +     L++ + DL   
Sbjct: 199 DAALTQAEQSLKQAGISVGVAKAKQTQAETTLANAEYDLQQT 240


>gi|322828590|gb|EFZ32329.1| hypothetical protein TCSYLVIO_1334 [Trypanosoma cruzi]
          Length = 411

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/238 (9%), Positives = 75/238 (31%), Gaps = 9/238 (3%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +   + + T+  +L++  I      +  E+  ++    +   +EK  +   +QL D   +
Sbjct: 114 VKLREQQATERCELREREIGRREQRLVEEEKQMEKRKWRLAEMEKDIQHMRQQLADARRR 173

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM--M 202
             +               ++ ++  R+++        E +    +    +  ++      
Sbjct: 174 AEAEAQAEVKRAKEDAAHAVALQEQRIQAAEAQTKRAEERLQQAQRDYLALSEEFHRFRT 233

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           + L   +  + +   +  R        L++ +  +                E    L  +
Sbjct: 234 RELAGPSEKATSVETRLRREFAVEQQALQDRLERRHMEREEQLTRRCRELEEENKRLTAL 293

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTIL-------SPIAGTIVYNQSFSSSNYAQ 313
           +   ++  R  A+E+ +L   +K  E +          + +  T+   +  +      
Sbjct: 294 ATKRKEQMRRTAEEVEQLISAKKKIEHRLRRKSAIDATADVTDTVKKKKDLAVGEVIS 351


>gi|320535427|ref|ZP_08035536.1| efflux transporter, RND family, MFP subunit [Treponema phagedenis
           F0421]
 gi|320147714|gb|EFW39221.1| efflux transporter, RND family, MFP subunit [Treponema phagedenis
           F0421]
          Length = 332

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 3/88 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG I        ++SP  GII+K  V+ G  +  G  + T +  +    +  ++ ++   
Sbjct: 63  SGYIEAAQQ-QILESPGEGIIQKVSVKEGDTVKAGQLIFTLDSTKEQYNLADQEFAMNQE 121

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESR 134
           + +  ++K  L  +  +Y++L+K  + R
Sbjct: 122 KINGASQK--LKLMQQQYEMLKKQLDDR 147



 Score = 43.5 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 21/212 (9%), Positives = 70/212 (33%), Gaps = 15/212 (7%)

Query: 211 VSQNDLNQQERIVYKSTLELRE-NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +Q  + +         + ++E +  +   ++  ++   ++ NL    +       +   
Sbjct: 68  AAQQQILESPGEGIIQKVSVKEGDTVKAGQLIFTLDSTKEQYNLADQEFAMN-QEKINGA 126

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
            +       +  +L+K  + +++++  +G +V  +  S   YA+       ++       
Sbjct: 127 SQKLKLMQQQYEMLKKQLDDRSVVAQFSGIVVGLKI-SQGQYAKPKDNFGTLI-DRTYLK 184

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
              +++      ++ G    + FP   D+   + +  +     I    D           
Sbjct: 185 ATVQISESDASRLQVGQKVRLTFPAEPDL---EVEGKVTSYPAIARVTDTGRT------- 234

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +  T++   +   ++  G+       A   T
Sbjct: 235 -IVDTNIRVDNPPEKILPGYSFNGTIVAGEDT 265


>gi|306846126|ref|ZP_07478688.1| efflux transporter, RND family, MFP subunit [Brucella sp. BO1]
 gi|306273377|gb|EFM55238.1| efflux transporter, RND family, MFP subunit [Brucella sp. BO1]
          Length = 390

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 115 RIDDVEQRANMRVAQASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 174

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 175 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 233

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 234 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 281



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 76  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 128

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + S+      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 129 QASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 188

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 189 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 245

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 246 IGMGVTVALLADPSIEAEGNIRELS 270


>gi|282858988|ref|ZP_06268126.1| efflux transporter, RND family, MFP subunit [Prevotella bivia
           JCVIHMP010]
 gi|282588268|gb|EFB93435.1| efflux transporter, RND family, MFP subunit [Prevotella bivia
           JCVIHMP010]
          Length = 450

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 47/168 (27%), Gaps = 7/168 (4%)

Query: 42  ISVSSSGEILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
            S S+  +      +  I+        SG I    V  G  +  G  L   ++    + +
Sbjct: 45  GSSSAQSKSTYPATIKGIQDVEVRPKVSGFITHLNVHEGQYVKAGQVLFVIDNSTYQEAV 104

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              +  +   +  +   ++A++  N   +      +    +L     K       + +Y 
Sbjct: 105 RQGQAHVDAAQSAVAQARAAVNTANASLN--SAKAQEATARLTYSNSKNLYANKVIGDYE 162

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           + +   +       +R                 A +   Q  L   K 
Sbjct: 163 LQAAKNTYATAEAAVRQAQSGVAQATAAIQQAEAGVKQAQAGLATAKE 210


>gi|262190324|ref|ZP_06048589.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           cholerae CT 5369-93]
 gi|262033781|gb|EEY52256.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio
           cholerae CT 5369-93]
          Length = 364

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 54/167 (32%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L + +  +    ++  ++ +KN        K+  +     
Sbjct: 77  SGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       G+ S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +    +          +   + + E +A+       + R     
Sbjct: 197 DLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFALKLRTYSTQ 243



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 74/219 (33%), Gaps = 18/219 (8%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + +    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 90  QVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYD 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I +P  G I      + +   Q +Q +M I+       +  ++
Sbjct: 150 LAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQV-QANQVIM-ILQDLNDLEVAIEI 207

Query: 335 TPK-QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
             +  +  V+    A        + +    K       P    Q         Y V+L  
Sbjct: 208 PHRVMLSGVRN-TRAIAELSAIPNQQF-ALKLRTYSTQPSSDSQT--------YSVVLGF 257

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH-PIT 431
            DL        +  G  A+V+  A N T    +I  P+T
Sbjct: 258 EDL----KGFRVMPGMSAKVIPVADNPTAENTLITLPLT 292


>gi|159903556|ref|YP_001550900.1| ABC transporter [Prochlorococcus marinus str. MIT 9211]
 gi|159888732|gb|ABX08946.1| possible ABC transporter component [Prochlorococcus marinus str.
           MIT 9211]
          Length = 339

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 57/139 (41%), Gaps = 9/139 (6%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSG-----IIKKFQVENGSQILQGTPLLTFEDI-ETTDL 95
             V++ G+++   +   + +P SG      I K  +  G QI +G  L  F++       
Sbjct: 84  EGVAALGQLVPFGDSRVLAAPVSGFGGTPRISKLLINEGDQIDKGQVLAIFDNRPRLEAD 143

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA---FESREEQLLDFLGKYHSTCSKV 152
           +++ K  ++ L  +I  +K  +D           A   FE + +QL    GK +   +++
Sbjct: 144 LEVSKARLQTLLSNISFQKREVDRYKETSREGASAFSIFEEKLDQLNILEGKRNEIIAEI 203

Query: 153 FNYGISSVYRSLKMKLTRM 171
               I   Y  LK  +  +
Sbjct: 204 KGLEIDLGYTQLKSPIDGV 222



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 67/199 (33%), Gaps = 13/199 (6%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKEISRDLEQNQRTFAD 275
           + E  +  S   L+  +       R ++   + +    + +   +E    L   +    +
Sbjct: 139 RLEADLEVSKARLQTLLSNISFQKREVDRYKETSREGASAFSIFEEKLDQLNILEGKRNE 198

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS-QPLMKIVPHSKLTYIRAKV 334
            ++++  LE       + SPI G ++   +       +   + +++ V  + L     +V
Sbjct: 199 IIAEIKGLEIDLGYTQLKSPIDGVVLRINAR-PGE--RPGNEGVLE-VASNHLMEALIEV 254

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI 390
               I  V+ G   ++         +      +  I P + Q+     +     +   + 
Sbjct: 255 YESDINRVRLGQNVSII--SENGGFDGTLLGKVTHISPQVRQRMVLSTDPTGDADARVIE 312

Query: 391 LKITDLAFSDNNIELRNGF 409
           ++I+    S + +    G 
Sbjct: 313 VRISLQPTSSDQVTRFTGM 331


>gi|218767667|ref|YP_002342179.1| hypothetical protein NMA0724 [Neisseria meningitidis Z2491]
 gi|121051675|emb|CAM07978.1| hypothetical protein NMA0724 [Neisseria meningitidis Z2491]
          Length = 1161

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 73/200 (36%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +++    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQMQRIHQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+T+ 
Sbjct: 359 WAMQVAEHEERLPELEETQA 378


>gi|84387464|ref|ZP_00990483.1| hypothetical protein V12B01_14986 [Vibrio splendidus 12B01]
 gi|84377717|gb|EAP94581.1| hypothetical protein V12B01_14986 [Vibrio splendidus 12B01]
          Length = 450

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 73/212 (34%), Gaps = 22/212 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL-EQN 269
           V + +L  Q     K+  +L +           +  + +    +  +  ++   +L EQ 
Sbjct: 79  VKKGELIAQ-LDNTKAKADLDKARSSLALAKSKLKRVQELLKKQPDSMSQQDVEELGEQA 137

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               AD   K  ++        +++P  G  + N + S  +    +  L+ ++       
Sbjct: 138 NLAAADFRQKEALMNDYL----LVAPFDGQ-LTNFTHSVGSKIDGATALVSLIKLD-PVE 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           ++  +    + + K G   +++   + D     F  +++ I P + +             
Sbjct: 192 VQYSIGQSDLGNAKLGQNVSIQVDAFVDE---AFSGVVDYIAPAVDESSG---------- 238

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
            +++     ++ +  L  G  A+V       T
Sbjct: 239 RVEV-HAHVTNPDHRLVPGMFAKVSQMTSEDT 269



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 37/92 (40%), Gaps = 10/92 (10%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I     ++G  + +G  +   ++ +    +D  + S+   +  +   +          ++
Sbjct: 68  ILNIHFKDGDSVKKGELIAQLDNTKAKADLDKARSSLALAKSKLKRVQ----------EL 117

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           L+K  +S  +Q ++ LG+  +  +  F    +
Sbjct: 118 LKKQPDSMSQQDVEELGEQANLAAADFRQKEA 149


>gi|321450794|gb|EFX62674.1| hypothetical protein DAPPUDRAFT_336617 [Daphnia pulex]
          Length = 690

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 71/224 (31%), Gaps = 18/224 (8%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV-------LEKAFESREEQ 137
           +    + + +  + K+V +   R      +       N  +V        +KA E R+ +
Sbjct: 283 IRIIIVRSNEDPEAKEVRLAANRERAKIAREEKRRRLNPEEVQVAKNLNAKKAREDRQAE 342

Query: 138 LLD---FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK-----SSLLR 189
             D      +  +   +V     + V    ++   R+R   L +   E +      +   
Sbjct: 343 APDERALRQRLDAERKRVARSNETQVEHEARLHDQRIRQQLLRQEQAEEENRARLLAEAE 402

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
                 Q++    + L E     Q  + +QE       L   E   + +   +    L  
Sbjct: 403 RQAVFRQEEENRARLLAE---AEQQAVLRQEEENRARLLAEAERQADLRQDEQIRARLQA 459

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           EA  + A   +E +  L    +  A +  ++ +      ++   
Sbjct: 460 EAERQAALRQQEAAIILRAMNQRPACDRPRVVLANDAVAERPAR 503



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/214 (10%), Positives = 70/214 (32%), Gaps = 7/214 (3%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
               D      +  ++ + +  R  +  E         + +   +     E+Q +    +
Sbjct: 372 ARLHDQRIRQQLLRQEQAEEENRARLLAEAERQAVFRQEEENRARLLAEAEQQAV-LRQE 430

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +    +      +  R  +    R+++    +  L  + + +     + +      + 
Sbjct: 431 EENRARLLAEAERQADLRQDEQIRARLQAEAERQAALRQQEAAIILRAMNQRPACDRPRV 490

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK-----NMLRHINELYDEANLEFANYL 259
           +   +AV++    +Q+    K   +  E   EQ+       LR      DE+  E +  L
Sbjct: 491 VLANDAVAE-RPARQQHQARKRAADDTETAEEQRARLQAQALRKKYLRRDESEAERSARL 549

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           ++ +   +  +   ++      + E+   Q ++ 
Sbjct: 550 QDQALRQKSLRNEESEAEKSSRLHEQALRQHSLR 583



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 60/183 (32%), Gaps = 11/183 (6%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           + +  +  + +   +A E R     +          +  N     V ++L  K  R    
Sbjct: 281 TGIRIIIVRSNEDPEAKEVRLAANRERAKIAREEKRRRLNPEEVQVAKNLNAKKAREDRQ 340

Query: 175 YL---NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                 R   +   +  + +  S++  +     L ++    +  L +QE+   ++   L 
Sbjct: 341 AEAPDERALRQRLDAERKRVARSNETQVEHEARLHDQRI--RQQLLRQEQAEEENRARL- 397

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             + E +       E  + A L      + + R  E+N+     E  +       R+ + 
Sbjct: 398 --LAEAERQAVFRQEEENRARLLAEAEQQAVLRQEEENRARLLAEAERQA---DLRQDEQ 452

Query: 292 ILS 294
           I +
Sbjct: 453 IRA 455


>gi|261365297|ref|ZP_05978180.1| SMC family protein [Neisseria mucosa ATCC 25996]
 gi|288566221|gb|EFC87781.1| SMC family protein [Neisseria mucosa ATCC 25996]
          Length = 1160

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +++    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQMQRIHQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|145337969|gb|AAI39787.1| HIP1 protein [Homo sapiens]
          Length = 517

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 65/192 (33%), Gaps = 5/192 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           LI+     I  L+  ++  K+    +  +        E+   +      +    C +   
Sbjct: 78  LIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDC-EFLR 136

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +  + R  +      RS+       +        L   + + +    +L  KNA    
Sbjct: 137 AELDELRRQREDTEKAQRSLSEIERKAQANEQRYSKLKEKYSELVQNHADLLRKNA---- 192

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ +Q  +  ++ ++L     E ++ L  I++       E    L+ + ++L  +QR   
Sbjct: 193 EVTKQVSMARQAQVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQ 252

Query: 275 DEMSKLTILEKT 286
                L    ++
Sbjct: 253 VLQGSLETSAQS 264


>gi|123441539|ref|YP_001005525.1| HlyD family secretion protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088500|emb|CAL11293.1| putative HlyD family secretion protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 402

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 83/266 (31%), Gaps = 37/266 (13%)

Query: 182 ENKSSLLRALLSSHQKDLTMM--KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE--Q 237
             K   + A +S   K L +   + + +   V++ D   Q+  +  +   L+  + +   
Sbjct: 60  AQKQVTVGAQVSGQIKALHVTLGQQVEKGQLVAEIDDLTQQNALKDAEEALKNVLAQRAA 119

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ-------- 289
           K   +  N+L  +   +       +  D +  + T     +++  L+    Q        
Sbjct: 120 KEATQKNNQLTYQRQQQILAKGLGVRADFDSAKATLDSTQAEIKALDAQIAQAEIAVSTA 179

Query: 290 ------KTILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                   I SPI GT+V             Q +  ++K V       + A+++   +  
Sbjct: 180 KLNLGYTKITSPINGTVVAIPVEEGQTVNAVQSAPTIIK-VAQLDTMTVEAQISEADVVK 238

Query: 342 VKKGYTA--------TVRFPHYADIREKK---FKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           VK G             RF       E                 S   ++  T  YY  +
Sbjct: 239 VKAGMPVYFTILGEPEERFSATLRAIEPAPDSINDETTTTSSSSSSSSSSTTTAIYYNGL 298

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFT 416
             +     ++ N  LR    A+V   
Sbjct: 299 FDV-----ANPNGALRISMTAQVYIV 319



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 17/153 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V + G I  +  V  + +  SG IK   V  G Q+ +G  +   +D+   + +   
Sbjct: 48  LEQTVLADGTIKAQKQV-TVGAQVSGQIKALHVTLGQQVEKGQLVAEIDDLTQQNALKDA 106

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++KN+      +++                  +  QL     +              S
Sbjct: 107 EEALKNVLAQRAAKEA----------------TQKNNQLTYQRQQQILAKGLGVRADFDS 150

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              +L      ++++       E   S  +  L
Sbjct: 151 AKATLDSTQAEIKALDAQIAQAEIAVSTAKLNL 183


>gi|116062145|dbj|BAF34703.1| fast skeletal myosin heavy chain isoform mMYH-3 [Oryzias latipes]
          Length = 1935

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 85/211 (40%), Gaps = 12/211 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            E+ + ++ K  S++  +  +  E   L    +  N+    L+K   + ++ L ++  KY 
Sbjct: 1403 ESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYE 1462

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             + +++   G     RSL  +L +M++ Y   LD   +   ++    + Q++++ +    
Sbjct: 1463 ESQAEL--EGAQKEARSLSTELFKMKNSYEEALD---QLETMKRENKNLQQEISDLTEQI 1517

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             +   S ++L + ++ V     E++  + E +  L H         LE      EI R L
Sbjct: 1518 GETGKSIHELEKAKKSVETEKSEIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKL 1577

Query: 267  EQNQRTFADEM---SKLTILEKTREQKTILS 294
             +             ++    ++  +  + S
Sbjct: 1578 AEKDEELEQIKRNSQRVIESMQSTLEAEVRS 1608



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 73/229 (31%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1207 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEGVAKSKGNLEKMCRTLEDQLSELKAKN 1264

Query: 146  HSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                 ++         + +       +L    ++       +   +     L  H ++  
Sbjct: 1265 DENVRQLNDLNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQIEELKRHVEEEV 1324

Query: 201  MMKNLFEKNAVSQND----LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
              KN       S       L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1325 KAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1384

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   + +  +     + E+      + G +     
Sbjct: 1385 EELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQR--LQGEVEDLMI 1431



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K   I  L   I+ E+S    L  K   L+   
Sbjct: 1057 EGDLKLAQESIMDLENDKQQSDEKIKKKDFEISQLLSKIEDEQSLGAQLQKKIKELQARI 1116

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1117 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1170

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1171 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1225

Query: 252  NLEFANYLKEIS------RDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +    +        +LE+  RT  D++S+L        ++
Sbjct: 1226 KMEIDDLSSNMEGVAKSKGNLEKMCRTLEDQLSELKAKNDENVRQ 1270


>gi|116252775|ref|YP_768613.1| transmembrane efflux protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115257423|emb|CAK08518.1| putative transmembrane efflux protein [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 410

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 91/311 (29%), Gaps = 33/311 (10%)

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           ++D  +       +A  S          +  +    V    I++++   + ++  +    
Sbjct: 113 SVDGTDVPAAGPIRALPSNNPADRALPSREVTGSGYVVAPDIATIFSKYEGRIAAVEVEA 172

Query: 176 LNRLDLENKSSLLR-ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
            +R+        L  A      +   + +   E    ++     Q R     T  L    
Sbjct: 173 GDRVVSGQVLVRLDDAGARFALQGAEITRQSAELALTAKTIELAQARSSLTRTERLAGRD 232

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                 L      +D A        +++++      R             +  E  T+ +
Sbjct: 233 AMSAQTLEEARTAFDTAENAAQQARQDVAKADLDIDR-----------AREQVEALTVRA 281

Query: 295 PIAGTIVYNQSFSSSNY------AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           PI+GT+    +             ++++ L+ I        I A V    I  ++ G   
Sbjct: 282 PISGTVTRLTAHVGDTVLSREDSVRENESLLAIA-DMTTMVIDADVAEANIALMRPGLRG 340

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
                 + D     F   + KI P+IS++   +              L+ S    ++R  
Sbjct: 341 ESVLDGFPDR---PFAVEVSKIAPMISREKGTVTL-----------RLSLSSPPSDMRPA 386

Query: 409 FPAEVLFTAKN 419
             A +      
Sbjct: 387 MAARIRLLVGE 397



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 56/160 (35%), Gaps = 13/160 (8%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+ SG ++   ++  I S + G I   +VE G +++ G  L+  +D      +   +++ 
Sbjct: 143 VTGSGYVVAP-DIATIFSKYEGRIAAVEVEAGDRVVSGQVLVRLDDAGARFALQGAEITR 201

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           ++    +  +   L    +     E+            L    +  ++      ++   +
Sbjct: 202 QSAELALTAKTIELAQARSSLTRTER------------LAGRDAMSAQTLEEARTAFDTA 249

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                   + +    LD++     + AL        T+ +
Sbjct: 250 ENAAQQARQDVAKADLDIDRAREQVEALTVRAPISGTVTR 289


>gi|332978344|gb|EGK15069.1| acriflavin resistance protein A [Psychrobacter sp. 1501(2011)]
          Length = 468

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/220 (10%), Positives = 69/220 (31%), Gaps = 2/220 (0%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I+   +G+I +     G  + +G PL               + +++    ++ T K++ +
Sbjct: 71  IRPQVTGVIDEILYPQGRMVQKGQPLYRLSVENYQSSQSAGQAAVQQAEANVQTAKASYN 130

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
             N   ++  +    ++ +      +   +   +           LK     + S     
Sbjct: 131 --NALANIESQKALLQQAEADVQRLRPLVSQQAISAQQYEQAITQLKTAQAGLNSAQAAA 188

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
              +   +  +A +++ +  L+  +    +  V        ER    +   +  N     
Sbjct: 189 QQAQANIASSQAAVNTAKAQLSGTQLDISRTIVRAPISGMTERSNVTAGALVNANQANPL 248

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
             +  IN +Y + +   +  LK   +      +     + 
Sbjct: 249 VTISKINPIYVDISQSSSELLKLKQQQASGALQAGNSTVE 288


>gi|330501652|ref|YP_004378521.1| peptidase M50 [Pseudomonas mendocina NK-01]
 gi|328915938|gb|AEB56769.1| peptidase M50 [Pseudomonas mendocina NK-01]
          Length = 697

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 26/218 (11%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              LEL     + +  +        +  L   +   E + D    ++  A+ +++   L 
Sbjct: 470 DLLLELDSPDLDSRQAIVRRETEILQLQLRRQSARSETAADAGILEQRLAEAVAEYRGLA 529

Query: 285 KTREQKTILSPIAGTIVYNQS-FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
             RE+  + +P +G +   Q   S   +   ++PL +IV       +R  +  + +  ++
Sbjct: 530 AQRERLQLRAPQSGVVRDLQRDLSVDRWLHPAEPLARIV--EPGLRLRGYLAEENLWRIE 587

Query: 344 KGYT------------ATVRFPHYADIREKKFKAIIEKID---PIISQQDNNLQTQEY-- 386
            G                VR            +      D   PI  ++D   + +    
Sbjct: 588 TGSEGRFITDDPARPAVKVRLDEVDATGVAYLELEALSSDHGGPIAVRRDAQRRAEPVQA 647

Query: 387 -YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
            Y V L + D     ++  LR G    V+   +  +L 
Sbjct: 648 QYGVRLTLMDGDIHPDH-PLR-GM---VILDGERQSLL 680



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 70/206 (33%), Gaps = 13/206 (6%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           SP +  +K   V++G  +  G  LL  +  +      + +   + L+  +  + +  +  
Sbjct: 449 SPVAARLKAVHVQDGQNVAAGDLLLELDSPDLDSRQAIVRRETEILQLQLRRQSARSETA 508

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
            +   + ++  E+    + ++ G              S V R L+  L+  R ++     
Sbjct: 509 ADAGILEQRLAEA----VAEYRGLAAQRERLQLRAPQSGVVRDLQRDLSVDRWLHPAEPL 564

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVS--------QNDLNQQERIVYKSTLELRE 232
                  LR      +++L  ++   E   ++        +  L++ +     + LEL  
Sbjct: 565 ARIVEPGLRLRGYLAEENLWRIETGSEGRFITDDPARPAVKVRLDEVDATGV-AYLELEA 623

Query: 233 NIHEQKNMLRHINELYDEANLEFANY 258
              +    +    +    A    A Y
Sbjct: 624 LSSDHGGPIAVRRDAQRRAEPVQAQY 649


>gi|299531719|ref|ZP_07045123.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           S44]
 gi|298720278|gb|EFI61231.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           S44]
          Length = 412

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 44/120 (36%), Gaps = 3/120 (2%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---D 111
             V+++   SG ++    + G+ +  G  L T +       +D  +  +   +  +    
Sbjct: 74  QRVDVQPRVSGAVQAVHFKEGALVKAGDLLFTVDPAPYVAEVDRAEAQVVAAKARMAYTQ 133

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           +E      L ++  + +K ++ R     +      +  + +    ++  Y  +K  ++  
Sbjct: 134 SESERATRLWDERAIAQKEYDERVNARREADANLRAAQAALQTAKLNLGYTQVKAPVSGR 193



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 37/106 (34%), Gaps = 8/106 (7%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V++ D  + + +  K+ +   ++  E+   L     +  +   E  N  +E   +L   
Sbjct: 111 YVAEVDRAEAQVVAAKARMAYTQSESERATRLWDERAIAQKEYDERVNARREADANLRAA 170

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           Q       + L   +       + +P++G +   +  +  N     
Sbjct: 171 Q-------AALQTAKLNLGYTQVKAPVSGRVGRIEV-TVGNLVSSG 208


>gi|260776984|ref|ZP_05885878.1| multidrug resistance efflux pump [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260606650|gb|EEX32924.1| multidrug resistance efflux pump [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 376

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 74/232 (31%), Gaps = 23/232 (9%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   +  +   +K        +  +  + +   +   A     Q++    +  ++K A +
Sbjct: 99  YEAEVEKLEAQIKEASQGALGLESDVQEAQAAQAQAIADRDKAQREYARYQRGYDKGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + +L+ + +    +   ++  + E +     I                 ++ ++     T
Sbjct: 159 EQELDTRRQEYKATEAAVK--VAEARVDQAKIA----------------LNSEIGGENTT 200

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQSQPLMKIVPHSKLTYIR 331
            A  +++L   E   EQ  + +P  G                   P+M  V   +  Y  
Sbjct: 201 VARLLAELRQAEFDLEQTIVRAPTDGFATQLALRPGVMAVPLPLAPVMTFVHTEETLYAA 260

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           A      +Q ++ GY A   F        K FK  +  + P I +     + 
Sbjct: 261 A-FRQNSLQRLQPGYEAEFLFRALP---GKVFKGEVVDVLPAIGESQFQARG 308


>gi|300024450|ref|YP_003757061.1| secretion protein HlyD [Hyphomicrobium denitrificans ATCC 51888]
 gi|299526271|gb|ADJ24740.1| secretion protein HlyD family protein [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 313

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 56/174 (32%), Gaps = 10/174 (5%)

Query: 235 HEQKNMLRHINELYDEANL--EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + K +   +           E          D+EQ +       +++   +   E+  +
Sbjct: 100 AQVKALEAQLKLSTQRLGQMTELVEKAAGRQFDVEQRRAEVDQLNAQIEGAKWNLEKTIV 159

Query: 293 LSPIAGTIVYNQSFSSSNYAQ-QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
            +P  G +        +  A     P+M  +  S    + A++     ++V  G +A V 
Sbjct: 160 RAPADGYVTNLALRKGARVASLPLAPVMAFIDTSDT-IVAAEIPQIYARYVMPGQSAEVT 218

Query: 352 FPHYA-DIREKKFKAIIEKIDPIISQ-----QDNNLQTQEYYEVILKITDLAFS 399
           F      +   K + +++ +    +Q               + V + + D + +
Sbjct: 219 FKFLPGQVFTGKVETVLQAVSTGQTQVSGLAVTPKQVASAPFVVRIALDDPSLA 272



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 57/184 (30%), Gaps = 13/184 (7%)

Query: 19  RMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQI 78
            + L  ++G+   + W            SG+++   + V I    +G +    V+  +Q+
Sbjct: 34  LVMLALLVGLFIPMGWGA---------PSGQLVVGRHSVAITPDVAGEVVDVPVQPNAQL 84

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            QG  L   + +     +   +  +K     +      +  L  K    +   E R  ++
Sbjct: 85  KQGDILFRIDPVPFEAQVKALEAQLKLSTQRL----GQMTELVEKAAGRQFDVEQRRAEV 140

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                +       +    + +        L   +   +  L L    + +    +    +
Sbjct: 141 DQLNAQIEGAKWNLEKTIVRAPADGYVTNLALRKGARVASLPLAPVMAFIDTSDTIVAAE 200

Query: 199 LTMM 202
           +  +
Sbjct: 201 IPQI 204


>gi|242315709|ref|ZP_04814725.1| membrane fusion protein MdtA [Burkholderia pseudomallei 1106b]
 gi|242138948|gb|EES25350.1| membrane fusion protein MdtA [Burkholderia pseudomallei 1106b]
          Length = 595

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 53/149 (35%), Gaps = 5/149 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + +++ G +    NV  +++  SG ++    + G  + +G  L   +      
Sbjct: 234 AARGEMPVVLNALGTVTPLANV-TVRTQLSGYLQAVSFQEGQIVKKGDVLAQIDPRPYQI 292

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   + ++      + T +  LD    +  V + +   +       L K +    ++  
Sbjct: 293 SLANAQGALARDEALLATAR--LDLKRYQTLVAQDSIAKQTADTQASLVKQYEGTVQIDR 350

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             I S    L +   R+ +    R+ L  
Sbjct: 351 AAIDS--AKLNLAYARITAPVSGRVGLRQ 377



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 25/218 (11%), Positives = 68/218 (31%), Gaps = 25/218 (11%)

Query: 187 LLRALLSSHQKDLTMMK-NLFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
            +R  LS + + ++  +  + +K  V +Q D    +  +  +   L  +          +
Sbjct: 256 TVRTQLSGYLQAVSFQEGQIVKKGDVLAQIDPRPYQISLANAQGALARDEALLATARLDL 315

Query: 245 NELYDE-ANLEFANYLKEISRDL-EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
                  A    A    +    L +Q + T   + + +   +       I +P++G +  
Sbjct: 316 KRYQTLVAQDSIAKQTADTQASLVKQYEGTVQIDRAAIDSAKLNLAYARITAPVSGRV-G 374

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI------QHV-----KKGYTATVR 351
            +     NY   S              +  ++ P  +       ++     + G    + 
Sbjct: 375 LRQVDPGNYVTPSDT--------NGIVVITQLQPMSVIFTTSEDNLPAILKQVGAGGKLS 426

Query: 352 FPHYADIREKKFK-AIIEKIDPIISQQDNNLQTQEYYE 388
              Y        +  +++ +D  I      ++ +  +E
Sbjct: 427 VTAYNRNNTTPLETGVLDTLDNQIDTATGTVKLRARFE 464


>gi|167522026|ref|XP_001745351.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776309|gb|EDQ89929.1| predicted protein [Monosiga brevicollis MX1]
          Length = 681

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 72/225 (32%), Gaps = 20/225 (8%)

Query: 68  KKFQVENGSQILQGTPL--LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
              +V  G        +  L       T+ ++  +    + R  +   +  +  L  +  
Sbjct: 252 TDLEVAQGDVAALRQEIVDLKLRADWATNNLEEARQDAGSARDAMRKAQQEIKALEKEVQ 311

Query: 126 VLEKAFESREEQLLDFLGKY--HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            L  A +  ++ + D L       + S+     ++ + +  +  +    S+  +   L+ 
Sbjct: 312 RLRTALDKEQKAMADRLDTLTKAKSESQALASRLAELEQKHESVVAEKNSLVQHNSQLKT 371

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
               +R  L   Q++                 L +Q+  + +   EL + + +       
Sbjct: 372 TLEDMRLQLDQTQRE----------------SLQEQQTKLQEQLAELEQALEDMTQAKAE 415

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +    ++      +    ++  L +  +   D   KL  LE++  
Sbjct: 416 LALALEDERASATSEATYLTGQLNEELQQRQDMQQKLRDLEESLR 460


>gi|289551798|ref|YP_003472702.1| hypothetical protein SLGD_02510 [Staphylococcus lugdunensis
           HKU09-01]
 gi|289181329|gb|ADC88574.1| hypothetical protein SLGD_02510 [Staphylococcus lugdunensis
           HKU09-01]
          Length = 373

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 13/174 (7%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
             + Q ER++   T   +      K          D   +      + +   L ++Q   
Sbjct: 81  QKVRQGERLISYDTNTSKRQSMANKVNQAQQQVNKDVTQINQTPNDQSLQTKLTEDQSAL 140

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           ++   +L   +K     T+ S   G +         + A   +P+++++  S    ++A 
Sbjct: 141 SEAQQQLAQYDKQVNDSTVAS-FNGIVNIKN----GSDASDGEPILQLI--SNQPQVKAS 193

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID--PIISQQDNNLQTQE 385
           V+   I  +K+G    ++     +   K     I KID  P   +   N  T +
Sbjct: 194 VSEFDIDKIKEGDNVNIKI----NSNGKSGTGKIIKIDQLPTSFEDSTNTNTAQ 243


>gi|239833447|ref|ZP_04681775.1| secretion protein HlyD family protein [Ochrobactrum intermedium LMG
           3301]
 gi|239821510|gb|EEQ93079.1| secretion protein HlyD family protein [Ochrobactrum intermedium LMG
           3301]
          Length = 314

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 77/235 (32%), Gaps = 23/235 (9%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LE      +A     ++ L   ++L ++  ++Q  L+     V  +   + +        
Sbjct: 100 LEAAVRTAKAQADDARRTLLRTQDLTKRGVMTQAQLDDAATKVEVAEASINQATANLA-- 157

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                             L      ++  +       ++L        ++TI +P AG I
Sbjct: 158 ---------------VGRLPARPETIKAAENAVRSAEAQLDSARWHLAKRTIEAPAAGRI 202

Query: 301 VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
                 +  + A  S P++ ++P      ++  +   +   ++ G   +VR     D   
Sbjct: 203 TDV-IRNPGDIAGPSAPVLTMLP-DGAVKLKVYIPEDKFSAIRVGDMLSVR----CDGCA 256

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
              +A +  + P        + + E  + ++ + +    D    L+ G   +V  
Sbjct: 257 PGLQARVSYVSPDPEFTPPVIYSLETRQKLVYLVEAHPVDPASPLQPGQIVDVDL 311


>gi|157375955|ref|YP_001474555.1| RND family efflux transporter MFP subunit [Shewanella sediminis
           HAW-EB3]
 gi|157318329|gb|ABV37427.1| efflux transporter, RND family, MFP subunit [Shewanella sediminis
           HAW-EB3]
          Length = 363

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 77/200 (38%), Gaps = 20/200 (10%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++  L        +   EL  +  E + + + +N L   +N EF +        + + +
Sbjct: 90  VTKGQLLAV-IDAKRQRFELARSQAEVEIIEQELNRLKKMSNKEFFSADS-----MAKLE 143

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                 ++K  +     ++  + SPI G I   +   + N A++   L  +V +    Y 
Sbjct: 144 YNLQAAIAKRDLAALQVQESMVRSPIDGVIAT-RFVKAGNMAKEFDELFYVV-NQDELYG 201

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHY-ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
              +  +Q+Q ++ G  A +    +  +   K   A + +I P++  Q         ++V
Sbjct: 202 IVHLPEQQLQSLRLGQDAQLFANSFANEHTAKTVHAKVLRISPVVDAQSGT------FKV 255

Query: 390 ILKITDLAFSDNNIELRNGF 409
            L +      + N  L+ G 
Sbjct: 256 TLSVP-----NQNATLKAGM 270



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 48/140 (34%), Gaps = 1/140 (0%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG+I+   VE G ++ +G  L   +       +   +  ++ +   ++  K   +     
Sbjct: 76  SGLIESINVEEGDRVTKGQLLAVIDAKRQRFELARSQAEVEIIEQELNRLKKMSNKEFFS 135

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            D + K   + +  +             +    I  V  +  +K   M   +     + N
Sbjct: 136 ADSMAKLEYNLQAAIAKRDLAALQVQESMVRSPIDGVIATRFVKAGNMAKEFDELFYVVN 195

Query: 184 KSSLLRALLSSHQKDLTMMK 203
           +   L  ++   ++ L  ++
Sbjct: 196 Q-DELYGIVHLPEQQLQSLR 214


>gi|31193924|gb|AAP44759.1| unknown protein [Oryza sativa Japonica Group]
          Length = 935

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 80/202 (39%), Gaps = 15/202 (7%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV---LEKAFESR 134
           + +G   L     ++ D++  +          I+ EK A D +N   ++   +EK   + 
Sbjct: 605 VTKGQVALALSTGDSADVVMEEL-------ARIEAEKIAEDAVNAHGELVAQVEKDLNAT 657

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            E+ L    +      K+       + +    ++    ++   R  +E++  +L  L S 
Sbjct: 658 FERELTKEREKIERLEKLAEEARVELDKLRAERVEENNALIRGRASVESEMEVLSKLRSE 717

Query: 195 HQKDLTMMKNLFEKNAVS--QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            ++ L  +  L +K  +S  +N + + +  +      + +  +E +   + ++     A 
Sbjct: 718 VEEQLQSV--LSKKVEISFEKNRIEKLQTEIENDRQAVVQLQYELEVERKALSMARAWAE 775

Query: 253 LEFANYLKEISRDLEQNQRTFA 274
            E A   +E +R LE+ +  + 
Sbjct: 776 DE-AKKAREHARALEEARNQWE 796


>gi|209965719|ref|YP_002298634.1| macrolide-specific efflux protein MacA precursor [Rhodospirillum
           centenum SW]
 gi|209959185|gb|ACI99821.1| macrolide-specific efflux protein MacA precursor [Rhodospirillum
           centenum SW]
          Length = 406

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 51/166 (30%), Gaps = 6/166 (3%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             ++      + D    +N       S      Q+R    + +  R     Q+ ML    
Sbjct: 83  QTVKQGDLIAEIDSVTQRNALRTAEASLKAFQAQKRQQQANLVRDRAAFARQRQMLS--A 140

Query: 246 ELYDEANLEFANY-LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
           E    A+ E A   L      +E  +         +           I SPI GT+V   
Sbjct: 141 EATSRADYEVAQASLAATEAQIEALEAQIVQAQISVETARANLGYTRITSPIDGTVVAI- 199

Query: 305 SFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTA 348
                     +Q    IV  +      ++A+++   +  V+ G  A
Sbjct: 200 VTKQGQTVNANQTAPTIVKIANLNEMTVKAEISEADVPRVRPGQEA 245



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  IE +V ++G +     +V + +  SG + +  VE G  + QG  +   + +   + +
Sbjct: 45  LGDIEQTVLATGTLE-AREMVSVGAQVSGQVIRLAVELGQTVKQGDLIAEIDSVTQRNAL 103

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              + S+K  +     +++ L        V ++A  +R+ Q+L       +   +V    
Sbjct: 104 RTAEASLKAFQAQKRQQQANL--------VRDRAAFARQRQMLSAEATSRADY-EVAQAS 154

Query: 157 ISSVYRSLKMKLTRMRSIYLN 177
           +++    ++    ++    ++
Sbjct: 155 LAATEAQIEALEAQIVQAQIS 175


>gi|189022518|ref|YP_001932259.1| Acriflavin resistance protein A precursor [Brucella abortus S19]
 gi|237816818|ref|ZP_04595810.1| efflux transporter, RND family, MFP subunit [Brucella abortus str.
           2308 A]
 gi|297249305|ref|ZP_06933006.1| acriflavin resistance protein A precursor [Brucella abortus bv. 5
           str. B3196]
 gi|189021092|gb|ACD73813.1| Acriflavin resistance protein A precursor [Brucella abortus S19]
 gi|237787631|gb|EEP61847.1| efflux transporter, RND family, MFP subunit [Brucella abortus str.
           2308 A]
 gi|297173174|gb|EFH32538.1| acriflavin resistance protein A precursor [Brucella abortus bv. 5
           str. B3196]
          Length = 390

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 115 RIDDVEQRANMRVAQASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 174

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 175 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 233

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 234 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 281



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 76  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 128

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + S+      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 129 QASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 188

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 189 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 245

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 246 IGMGVTVALLADPSIEAEGNIRELS 270


>gi|121583897|ref|NP_001073470.1| tuftelin [Danio rerio]
 gi|116487616|gb|AAI25924.1| Zgc:153955 [Danio rerio]
 gi|182889148|gb|AAI64704.1| Zgc:153955 protein [Danio rerio]
          Length = 384

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 74/197 (37%), Gaps = 2/197 (1%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           T  ++  +          +  + A   L  +    EK  +   E+LL    +Y    S+ 
Sbjct: 145 TQSLNGLERQDSMDEQEKEKMREASKRLYGQLQEAEKKHQEEREKLLMEARQYKQQLSEQ 204

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
             + +  + +S + +  ++  +      +E +SS LR  L S + ++  ++ L ++  V 
Sbjct: 205 SEH-LKRIQQSKQQQDQQIDDLRRLMSGMEQESSGLREQLMSREAEILQLRELRDEGHVG 263

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
              L + E+       ++       K+  R + ++ ++        ++E  R + + +  
Sbjct: 264 TQRLEELEKDNAILKEKIHHLDDMLKSQQRKMRQMIEQLQNSRM-VIQERDRAIRELEEK 322

Query: 273 FADEMSKLTILEKTREQ 289
            A   ++   +    + 
Sbjct: 323 VAMLEAENKQMRDQMDY 339


>gi|78063279|ref|YP_373187.1| HlyD family secretion protein [Burkholderia sp. 383]
 gi|77971164|gb|ABB12543.1| Secretion protein, HlyD family [Burkholderia sp. 383]
          Length = 488

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 58/215 (26%), Gaps = 27/215 (12%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            ++  DL  +   +  +   L       +       E             ++    L + 
Sbjct: 220 VIASTDLADRRSELLTAERRLSGARATYERERTLWKERIS-----AEQDYQQAQVQLREA 274

Query: 270 QRTFADEMSKLTIL-----EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +    +   KL  L          +  + +P AGTIV   + +       +   M ++  
Sbjct: 275 EIAVQNARQKLAALNAPVGAGALNRYELRAPFAGTIVEKHA-TPGEAI-AADASMFVISD 332

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
               +    V  +++  V+ G  ATV    +              +  ++ +Q       
Sbjct: 333 LSTVWAEMAVPAQRLNDVRVGRDATVIATAFESRSSGPIA----YVGSLLGEQTRTA--- 385

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                      +   + +   R G    V   A  
Sbjct: 386 --------PARVVLPNPDGVWRPGMFVNVSVDAGK 412



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 3/101 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLN 121
           GI+++  V  G  + +G  L      +  D       + + L   R   + E++      
Sbjct: 199 GIVEQVSVSLGQNVAKGQVLAVIASTDLADRRSELLTAERRLSGARATYERERTLWKERI 258

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +     ++A     E  +          +     G  ++ R
Sbjct: 259 SAEQDYQQAQVQLREAEIAVQNARQKLAALNAPVGAGALNR 299


>gi|332308131|ref|YP_004435982.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175460|gb|AEE24714.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 396

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 96/262 (36%), Gaps = 16/262 (6%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G ++      E++    G++ +     G+ + QG  L   E       ++  + ++ + 
Sbjct: 52  QGRVVASLTA-EVRPQVGGVVHERLFTEGNYVEQGDVLYQIEPATFQAAVNEAQANLNSA 110

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              ++T K      + ++  L +     ++   D    Y    + +  +  +     + +
Sbjct: 111 EASLETAK----LKDQRFADLLEFEGVSQQDADDAHATYLEAKADIERFEAALETARINL 166

Query: 167 KLTRMRSIYLNRLDLENKS--SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + T++ +    ++ +   +  +L+ A  ++    +  +  +F     S  ++ +  +++ 
Sbjct: 167 EFTKVTAPISGQIGISTVTPGALVTASQATALSTIRTLDPIFVDMTKSSTEILKLRQLLA 226

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL---- 280
           KS   +++   +   +L   +E   +  L+      + S      +  FA+    L    
Sbjct: 227 KSG--IKKGSTDVSLILEDGSEYELKGQLKMQEVAVDASTGAVTLRAEFANPDGLLLPGM 284

Query: 281 ---TILEKTREQKTILSPIAGT 299
              T +    ++  IL P  G 
Sbjct: 285 FVRTQINDAVDENAILVPQQGI 306


>gi|332091125|gb|EGI96215.1| macrolide-specific efflux protein macA [Shigella dysenteriae
           155-74]
          Length = 263

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++ L+L    + ++  L     +  +     A  +      +          
Sbjct: 3   LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRN 62

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 63  QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 121

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H+K G  A   F    D    +++  I+     +      +    +Y    ++ 
Sbjct: 122 SEADVIHLKAGQKAW--FTVLGDPLT-RYEGQIK----DVLPTPEKVNDAIFYYARFEVP 174

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN-----TTLAQEIIHPITDN 433
                + N  LR    A+V     +     T     +  P+ DN
Sbjct: 175 -----NPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDN 213


>gi|291532931|emb|CBL06044.1| Multidrug resistance efflux pump [Megamonas hypermegale ART12/1]
          Length = 357

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 58/410 (14%), Positives = 129/410 (31%), Gaps = 88/410 (21%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEI-----LNEDNVVEIKSPFSGIIKKF 70
           S+  + L++++ I G+  W+            G I         + V + +   G + + 
Sbjct: 30  SVPIILLIAVVAIFGVYKWN---------QGQGIININDAKLTSSKVMVVAQNDGTLTEL 80

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V +G ++  G  +   + + T +               I+  + A D     YD LE+ 
Sbjct: 81  LVNDGDKVEAGQVIAKMKVVVTPE--------------QIEALQKAYDEAKVNYDNLEQQ 126

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            ++                                   + + S  +         +  +A
Sbjct: 127 VKA-----------------------------------SMVVSQPVVTSSSTGNVAAAQA 151

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L +   +   M  L+   AVS     + +     +                   ++ ++
Sbjct: 152 RLDAAAANKQKMDKLYSIGAVSATQYAEAQSEYAAAQ---------SALAAASTPQVVEQ 202

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
                +   KE+S  L   Q       + L   +       I +P++G I Y   F   +
Sbjct: 203 QASVSSAPSKELSEALATAQIQLNQAKAALDQAQSDDNFADITAPVSGII-YLTDFKQGD 261

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             +Q    +  V ++K  ++ A +T +Q   V +G      F HY+ + +      + ++
Sbjct: 262 ELKQGDVFIN-VGNTKNLWVEAPLTEEQYAKVHQGQ-----FVHYS-VDDMDLTGTVLEV 314

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDN-NIELRNGFPAEVLFTAKN 419
               S+ + N         ++    ++F D    ++  G    V  T   
Sbjct: 315 THQDSEDEENKN-------LVTAAKISFPDELKDKVLPGADVTVQITIDR 357


>gi|255009361|ref|ZP_05281487.1| hypothetical protein Bfra3_09492 [Bacteroides fragilis 3_1_12]
 gi|313147118|ref|ZP_07809311.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313135885|gb|EFR53245.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 416

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 102/314 (32%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE-EQLLDFLGKYHSTCSK 151
           ++ I + +V       ++D E      L  K +  E     R   +    L K  +  + 
Sbjct: 45  SENIQIAEVKDGKFMEYVDVEGLIQPILTIKVNTREAGSVERIIAEEGSLLQKGDTILTL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + S+         +  +     +++E KS  L+        +L  +K  F     
Sbjct: 105 SNPDLLRSIEDQRDDWEKQRITYQEKEIEMEQKSLNLKQQTLETNYELARLKKSFA---- 160

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
                  +E        + +  + E +   +  N      +L   + +  I +DL   + 
Sbjct: 161 -----LDKEEFRMGIKSKAQLEVSEDEYNYKVKNAELQRESLRHDSAVTIIRKDL--IRT 213

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  K     +      + +P+ G + + +  +        + + +I        I 
Sbjct: 214 DMERERKKYERATERLGNLVVKAPLGGQLSFVKV-TPGQQVSSGESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPI-ISQQDNNLQTQE 385
             ++   I  +  G  ATV +    Y     K    + ++   +D +   +  +N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATVNYQGKRYPLRITKVVPEVKDRMFDVDLVFTGEMPDNVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEQA 345


>gi|206564023|ref|YP_002234786.1| putative macrolide-specific efflux system transport protein
           [Burkholderia cenocepacia J2315]
 gi|198040063|emb|CAR56044.1| putative macrolide-specific efflux system transport protein
           [Burkholderia cenocepacia J2315]
          Length = 397

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 61/149 (40%), Gaps = 13/149 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V ++G +     V ++ +  SG +K  +V+ G ++ +G  L   + + + + +   
Sbjct: 48  LENAVLATGALQAFRQV-DVGAQVSGQLKTLKVKLGDKVTKGQWLAEIDPVISENALRQA 106

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S ++LR    +  + L          E AF  ++  L D      +T  + F    ++
Sbjct: 107 RASEESLRAQQQSTAAQLTQA-------ELAFRRQQAMLPD-----DATSRESFEAARAA 154

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +        +    I   R+ +E   + L
Sbjct: 155 LDVQRATLASLAAQIRSARIQIETAQANL 183



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 5/224 (2%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            L+     +  Q L          + V   G    +R + +       +   ++ L +K 
Sbjct: 26  TLKACAPDKHPQYLSAPVTRGDLENAVLATGALQAFRQVDVGAQVSGQLKTLKVKLGDKV 85

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  + L      D  + +N   +   S+  L  Q++       +       Q+ ML    
Sbjct: 86  TKGQWLAEI---DPVISENALRQARASEESLRAQQQSTAAQLTQAELAFRRQQAMLPDDA 142

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              +      A    +    L            ++   +       I++PI G +V   +
Sbjct: 143 TSRESFEAARAALDVQ-RATLASLAAQIRSARIQIETAQANLGYTRIVAPIDGEVVAIVT 201

Query: 306 FSSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
                   Q Q P++  + +     ++A+V+   +  V  G TA
Sbjct: 202 QEGQTVIAQQQAPVILKLANLDTMTVKAQVSEADVIRVSAGQTA 245


>gi|254301858|ref|ZP_04969301.1| multidrug resistance protein [Burkholderia pseudomallei 406e]
 gi|157811644|gb|EDO88814.1| multidrug resistance protein [Burkholderia pseudomallei 406e]
          Length = 489

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/261 (10%), Positives = 77/261 (29%), Gaps = 16/261 (6%)

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           +E++   ++      +    +     +L    +       +     +     ++    ++
Sbjct: 148 SEETDDAYVAGNVVQIAAQIQGTVTDVLVADTQQVKAGQALVRLDDAEAGGGVRAGAAQL 207

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
                   +           + + + DL + +  +   A +  ++   E           
Sbjct: 208 AQAVRQVANTRLSMQTYEQTVKAREADLKLAQQAYRARAGASVEVVAPE----------- 256

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +   K+ L +       A  +        S              ++  +  +  ++ T
Sbjct: 257 -ELARAKSSLANAQAALAGAQAQREAARALGSERPVGQNPAVQQAAAQFKLAYRNLKRTT 315

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           I+SP+ GT+   +S           PLM +V   +  ++ A     Q++H++ G    + 
Sbjct: 316 IVSPVDGTV-GQRSVQIGQQVGPGVPLMSVV-QLRQVWVEANFKEGQLRHMRVGQPVRLE 373

Query: 352 FPHYADIREKKFKAIIEKIDP 372
              Y       +   +E    
Sbjct: 374 SDLYGARVT--YHGRVEGFSA 392



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 62/209 (29%), Gaps = 5/209 (2%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
               +L+I+ +   + W I+           +     NVV+I +   G +    V +  Q
Sbjct: 125 WFFGVLAIVALGAALYWFIVGRFSEETD---DAYVAGNVVQIAAQIQGTVTDVLVADTQQ 181

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+  +D E    +      +      +   + ++          E   +  ++ 
Sbjct: 182 VKAGQALVRLDDAEAGGGVRAGAAQLAQAVRQVANTRLSMQTYEQTVKAREADLKLAQQA 241

Query: 138 LLDFLGKYHSTCS--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
                G      +  ++     S       +   + +      L  E       A+  + 
Sbjct: 242 YRARAGASVEVVAPEELARAKSSLANAQAALAGAQAQREAARALGSERPVGQNPAVQQAA 301

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
            +     +NL     VS  D    +R V 
Sbjct: 302 AQFKLAYRNLKRTTIVSPVDGTVGQRSVQ 330


>gi|158287493|ref|XP_564385.3| AGAP011138-PA [Anopheles gambiae str. PEST]
 gi|157019677|gb|EAL41598.3| AGAP011138-PA [Anopheles gambiae str. PEST]
          Length = 1909

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 69/202 (34%), Gaps = 5/202 (2%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             ++ +       R  +  +K  L+      +  ++A  + EE ++  L +       +  
Sbjct: 1567 SLECQLEQEHEERTQLLRDKHELERKLASLEDQDRAERAAEEAMVQRLKRDARKYRALLR 1626

Query: 155  YGISSVYRSLKMKLTR--MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               S + R+     ++  +R +     D E+            + +L   + LFE+   +
Sbjct: 1627 DAQSQLDRAKGDSASKALVRQLRNQLEDAESARVAALKARQVLEGELQDAQLLFEETQRA 1686

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK---EISRDLEQN 269
            +N+   +  +  +   EL+  I E +  +  + + Y     + ++      E    + + 
Sbjct: 1687 RNEAEDRATVAQRDRAELQAQIDENEEEMAELMKKYSATVKQLSSEQSLIAEYELRVSEL 1746

Query: 270  QRTFADEMSKLTILEKTREQKT 291
            +        ++  L    E   
Sbjct: 1747 EGEKKSLKEQVVELATRLESVE 1768



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 74/223 (33%), Gaps = 20/223 (8%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDT----EKSALDFLNNKYDVLEKAFESREEQLLDF 141
              +++      + +   +K  +  +D     +   LD +  +  +LE+A    E  L   
Sbjct: 1480 ELDEMAFGGGTEEEIAQLKRQKNELDRRCKEQDEELDEMAGQIQLLEQAKLRLEMSLETS 1539

Query: 142  LGKYHSTCSKVFNY----------GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              +      +  +            I S+   L+ +      +  ++ +LE K + L   
Sbjct: 1540 RKEARKEAQQRDDEMEEIRGASYKKIKSLECQLEQEHEERTQLLRDKHELERKLASLEDQ 1599

Query: 192  -LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN--IHEQKNMLRHINELY 248
              +    +  M++ L       +  L   +  + ++  +      + + +N L       
Sbjct: 1600 DRAERAAEEAMVQRLKRDARKYRALLRDAQSQLDRAKGDSASKALVRQLRNQLEDAESAR 1659

Query: 249  ---DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                +A       L++     E+ QR   +   + T+ ++ R 
Sbjct: 1660 VAALKARQVLEGELQDAQLLFEETQRARNEAEDRATVAQRDRA 1702



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 71/188 (37%), Gaps = 6/188 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +L D + +  +  R   + E  A     ++ + L+   +  EE++ + + KY +T  ++ 
Sbjct: 1672 ELQDAQLLFEETQRARNEAEDRATVAQRDRAE-LQAQIDENEEEMAELMKKYSATVKQLS 1730

Query: 154  NYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +    I+     +       +S+    ++L  +   +  +             L  K   
Sbjct: 1731 SEQSLIAEYELRVSELEGEKKSLKEQVVELATRLESVETIGEPSNSMAFKRLELRTKELE 1790

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            S+ +  Q  R   +  ++L  +    + +   +++  +    +  + LK+  + + + + 
Sbjct: 1791 SRLEFEQATR--ARIEIQLARHKDSLEKLQGELSQARNR-EAQAQDALKKGQKTVRELRD 1847

Query: 272  TFADEMSK 279
              +   ++
Sbjct: 1848 ELSTLANR 1855


>gi|187478308|ref|YP_786332.1| HlyD family secretion protein [Bordetella avium 197N]
 gi|115422894|emb|CAJ49422.1| putative HlyD-family secretion protein [Bordetella avium 197N]
          Length = 354

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 20  MTLLSIIGIIGLITWSIL---LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           + +L+++ + G   W  L    P E     +G I   +  V  K P  G ++   V  G 
Sbjct: 10  VAILALVVLGGYYGWMALQARGPGEGFAGGNGRIEATEIDVATKLP--GRVEDVLVNEGD 67

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G PL   +        +  +   +       + ++ +    +     +     RE 
Sbjct: 68  FVTAGQPLARMQIDTLNAQREEARAQHQRAVNAEASARAQIALRESDKAAAQAVVAQRES 127

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +L     +     S+  +   ++  + L     RM+S
Sbjct: 128 ELDA--ARRRLARSQTLSKEGAASLQELDDDRARMKS 162


>gi|62289273|ref|YP_221066.1| transporter [Brucella abortus bv. 1 str. 9-941]
 gi|82699203|ref|YP_413777.1| transporter [Brucella melitensis biovar Abortus 2308]
 gi|189023526|ref|YP_001934294.1| transporter [Brucella abortus S19]
 gi|237814763|ref|ZP_04593761.1| efflux transporter, RND family, MFP subunit [Brucella abortus str.
           2308 A]
 gi|254688590|ref|ZP_05151844.1| transporter, putative [Brucella abortus bv. 6 str. 870]
 gi|254693072|ref|ZP_05154900.1| transporter, putative [Brucella abortus bv. 3 str. Tulya]
 gi|254696714|ref|ZP_05158542.1| transporter, putative [Brucella abortus bv. 2 str. 86/8/59]
 gi|254729624|ref|ZP_05188202.1| transporter, putative [Brucella abortus bv. 4 str. 292]
 gi|256256838|ref|ZP_05462374.1| transporter, putative [Brucella abortus bv. 9 str. C68]
 gi|260545973|ref|ZP_05821714.1| efflux transporter [Brucella abortus NCTC 8038]
 gi|260754059|ref|ZP_05866407.1| efflux transporter [Brucella abortus bv. 6 str. 870]
 gi|260757281|ref|ZP_05869629.1| efflux transporter [Brucella abortus bv. 4 str. 292]
 gi|260761103|ref|ZP_05873446.1| efflux transporter [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883086|ref|ZP_05894700.1| efflux transporter [Brucella abortus bv. 9 str. C68]
 gi|261213306|ref|ZP_05927587.1| efflux transporter [Brucella abortus bv. 3 str. Tulya]
 gi|297247686|ref|ZP_06931404.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
 gi|62195405|gb|AAX73705.1| transporter, hypothetical [Brucella abortus bv. 1 str. 9-941]
 gi|82615304|emb|CAJ10262.1| transporter, putative [Brucella melitensis biovar Abortus 2308]
 gi|189019098|gb|ACD71820.1| transporter, putative [Brucella abortus S19]
 gi|237789600|gb|EEP63810.1| efflux transporter, RND family, MFP subunit [Brucella abortus str.
           2308 A]
 gi|260097380|gb|EEW81255.1| efflux transporter [Brucella abortus NCTC 8038]
 gi|260667599|gb|EEX54539.1| efflux transporter [Brucella abortus bv. 4 str. 292]
 gi|260671535|gb|EEX58356.1| efflux transporter [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674167|gb|EEX60988.1| efflux transporter [Brucella abortus bv. 6 str. 870]
 gi|260872614|gb|EEX79683.1| efflux transporter [Brucella abortus bv. 9 str. C68]
 gi|260914913|gb|EEX81774.1| efflux transporter [Brucella abortus bv. 3 str. Tulya]
 gi|297174855|gb|EFH34202.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
          Length = 383

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 27/193 (13%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-----------QRTFADEMSKLTI 282
           I E       I     E  L+ A   ++    L              +   A+    L  
Sbjct: 114 IAELDAETEQIAVAKAETALKDARTTRQRIARLRATNTATEVQAVGAELAVANAQLALQD 173

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +    ++ + +PI G +      +  NY      + +I        I   V  +    +
Sbjct: 174 AQLALSRRMVRAPITGIVGILPVNA-GNYVTAQTSIARI-DDRSTVLIDIWVPERFAPQI 231

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G   T     +        K  I  +D ++ +    L       V  ++ +       
Sbjct: 232 KVGQPLTAESTAFPGEIY---KGQINAVDNMLDEASRTLH------VRAEVPNAED---- 278

Query: 403 IELRNGFPAEVLF 415
             LR G    V  
Sbjct: 279 -RLRAGMSFSVTI 290



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 30/105 (28%), Gaps = 3/105 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT---DLIDLKKVSIKNLRCHIDTEKS 115
           +    SG + K QV  G  + +G  +   +           +      +  R  I   ++
Sbjct: 89  VTPYSSGYMTKLQVRAGDTVKEGDLIAELDAETEQIAVAKAETALKDARTTRQRIARLRA 148

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                  +    E A  + +  L D          +    GI  +
Sbjct: 149 TNTATEVQAVGAELAVANAQLALQDAQLALSRRMVRAPITGIVGI 193


>gi|238791303|ref|ZP_04634942.1| Macrolide-specific efflux protein [Yersinia intermedia ATCC 29909]
 gi|238729436|gb|EEQ20951.1| Macrolide-specific efflux protein [Yersinia intermedia ATCC 29909]
          Length = 391

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 51/142 (35%), Gaps = 11/142 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     V  + +  +G + K  V+ G ++ +G  L   +     + +   
Sbjct: 51  IERNVMATGSLKPSLQV-NVGAQVNGQLTKLYVKQGDRVTRGQLLAEIDPTLQQNELRKS 109

Query: 100 KVSI----------KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +  +          + L      E      L  +   ++ A E  + Q    L + H   
Sbjct: 110 EAELQSAQAQKQASQALLRQYLLEFRRQQTLATEGSGVKSALEKAQAQYDSQLAQLHVNE 169

Query: 150 SKVFNYGISSVYRSLKMKLTRM 171
           +++    +S       +  TR+
Sbjct: 170 AQIVQSQMSLETAKANLGFTRI 191



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 81/269 (30%), Gaps = 20/269 (7%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           S+  SL++ +    +  L +L ++    + R  L +          L +    S+ +L  
Sbjct: 60  SLKPSLQVNVGAQVNGQLTKLYVKQGDRVTRGQLLAEIDPTLQQNELRK----SEAELQS 115

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINEL--YDEANLEFANYLKEISRDLEQNQRTFADE 276
            +     S   LR+ + E +       E      A  +           L  N+      
Sbjct: 116 AQAQKQASQALLRQYLLEFRRQQTLATEGSGVKSALEKAQAQYDSQLAQLHVNEAQIVQS 175

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI--VPHSKLTYIRAKV 334
              L   +       I++PI G ++             SQ +  I  + +     +  ++
Sbjct: 176 QMSLETAKANLGFTRIMAPIDGEVLGI-VTKEGQTIVSSQTVPTILVLANVDTMTVHTRI 234

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE------YYE 388
           +   I  V  G           + R +     I++      ++++   +        YY 
Sbjct: 235 SETDILKVNVGQPLWFYVVADPERRYESRMDAIQEASAESLREESAGASNSQQPSAVYYN 294

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTA 417
            I  I +         LR    A+V    
Sbjct: 295 GIFSIANRERL-----LRTSMTAQVFIIT 318


>gi|15600818|ref|NP_232448.1| hypothetical protein VCA0047 [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|121585942|ref|ZP_01675735.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121729766|ref|ZP_01682204.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147672478|ref|YP_001214929.1| hypothetical protein VC0395_0088 [Vibrio cholerae O395]
 gi|153816743|ref|ZP_01969410.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153823675|ref|ZP_01976342.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227811676|ref|YP_002811686.1| hypothetical protein VCM66_A0045 [Vibrio cholerae M66-2]
 gi|229506775|ref|ZP_04396284.1| multidrug resistance efflux pump [Vibrio cholerae BX 330286]
 gi|229510430|ref|ZP_04399910.1| multidrug resistance efflux pump [Vibrio cholerae B33]
 gi|229517439|ref|ZP_04406884.1| multidrug resistance efflux pump [Vibrio cholerae RC9]
 gi|229605249|ref|YP_002875953.1| multidrug resistance efflux pump [Vibrio cholerae MJ-1236]
 gi|254850315|ref|ZP_05239665.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255746123|ref|ZP_05420070.1| multidrug resistance efflux pump [Vibrio cholera CIRS 101]
 gi|262158610|ref|ZP_06029724.1| multidrug resistance efflux pump [Vibrio cholerae INDRE 91/1]
 gi|262168977|ref|ZP_06036671.1| multidrug resistance efflux pump [Vibrio cholerae RC27]
 gi|298499913|ref|ZP_07009719.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9657429|gb|AAF95961.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121549878|gb|EAX59898.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121628488|gb|EAX60975.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126512762|gb|EAZ75356.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126518803|gb|EAZ76026.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146314861|gb|ABQ19401.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227010818|gb|ACP07029.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227014680|gb|ACP10889.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229345475|gb|EEO10448.1| multidrug resistance efflux pump [Vibrio cholerae RC9]
 gi|229352875|gb|EEO17815.1| multidrug resistance efflux pump [Vibrio cholerae B33]
 gi|229357126|gb|EEO22044.1| multidrug resistance efflux pump [Vibrio cholerae BX 330286]
 gi|229371735|gb|ACQ62157.1| multidrug resistance efflux pump [Vibrio cholerae MJ-1236]
 gi|254846020|gb|EET24434.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255735877|gb|EET91275.1| multidrug resistance efflux pump [Vibrio cholera CIRS 101]
 gi|262022676|gb|EEY41383.1| multidrug resistance efflux pump [Vibrio cholerae RC27]
 gi|262029490|gb|EEY48140.1| multidrug resistance efflux pump [Vibrio cholerae INDRE 91/1]
 gi|297541894|gb|EFH77945.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 376

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 72/233 (30%), Gaps = 25/233 (10%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F   ++ +   +K        +     + +       A     Q++    +  +++ A +
Sbjct: 99  FEADVARLKAKVKEASQGALGLESTLKEAQAAVLKAIAERDKAQREYDRYQRGYQRGAFT 158

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  ++   +    +   L   + + K     I                 +  ++     T
Sbjct: 159 EQQMDTTRQTYKAAQAALE--VAQSKQEQAQIA----------------LDSEVGGENTT 200

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS--NYAQQSQPLMKIVPHSKLTYI 330
            A  +++L   E   EQ  + +P  G +           +      P+M  V   +  Y 
Sbjct: 201 VAQLLAELRKAEFDLEQTIVRAPTDGYVTQLALR-PGMMSVPLPLAPVMTFVHTEEKIYT 259

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
            A      +Q ++ G+ A   F        K FK  + ++ P I +     + 
Sbjct: 260 AA-FRQNSLQRLQPGFAAEFMFRALP---GKVFKGEVIEVLPAIGESQIQARG 308



 Score = 43.1 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 48/147 (32%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G + +  V+    + QG  L   + I     +   K  +K        L   +   ++A+
Sbjct: 72  GRVVEVPVKPNQPLTQGDVLFRIDPIPFEADVARLKAKVKEASQGALGLESTLKEAQAAV 131

Query: 118 DFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                + D  ++ ++  +   Q   F  +   T  + +    +++  +   +     ++ 
Sbjct: 132 LKAIAERDKAQREYDRYQRGYQRGAFTEQQMDTTRQTYKAAQAALEVAQSKQEQAQIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                     + L A L   + DL   
Sbjct: 192 SEVGGENTTVAQLLAELRKAEFDLEQT 218


>gi|332235652|ref|XP_003267020.1| PREDICTED: cingulin-like protein 1 [Nomascus leucogenys]
          Length = 1302

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 15/210 (7%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            E  +  +++  +  + +  +   +     L   N K     +  E R  QL   +     
Sbjct: 798  EATKNVEVLASRSNTSEQDQAGTEMCVKLLQEENEKLQGRSEELERRVAQLQRQIEDLKG 857

Query: 148  TCSKV------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              +K       +   I  +  +L       +     R  LEN+    +  LS   ++   
Sbjct: 858  DEAKAKETLKKYEGEIRQLEEALVHARKEEKEAVSARRALENELEAAQGNLSQTTQEQKQ 917

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +    ++ +  +  L + +  +      L + I + +  +  I E    + LE  N L E
Sbjct: 918  LSEKLKEESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADIVEASRTSTLELQNQLDE 977

Query: 262  I----SRDLEQNQRTFAD-----EMSKLTI 282
                  R+L + QR   +     E S+LT 
Sbjct: 978  YKEKNRRELAEMQRQLKEKTLEAEKSRLTA 1007



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 78/241 (32%), Gaps = 19/241 (7%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V+N   I +    +     E     + K      L+  ++  +  L     +   ++
Sbjct: 631 QLEVKNQQNIKEERERMRANLEELRSQHNKKVEENSRLQQRLEESEGELRKNLEELFQVK 690

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E  + ++ D   +      +  +    S  R     +  +     +  DL       
Sbjct: 691 MEREQHQTEIRDLQDQLSEMHDE-LDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQ 749

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINE- 246
             LL   +++LT +K   ++   S   ++++ +         LRE++ E    +  +   
Sbjct: 750 EDLLRKRERELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASR 809

Query: 247 ----------------LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                           L  E N +     +E+ R + Q QR   D        ++T ++ 
Sbjct: 810 SNTSEQDQAGTEMCVKLLQEENEKLQGRSEELERRVAQLQRQIEDLKGDEAKAKETLKKY 869

Query: 291 T 291
            
Sbjct: 870 E 870



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 74/209 (35%), Gaps = 10/209 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++ +  +  +L ++  +     ++ EKS L  +      ++      EE+L D+    
Sbjct: 974  QLDEYKEKNRRELAEMQRQLKEKTLEAEKSRLTAMK-----MQDEMRLMEEELRDYQRAQ 1028

Query: 146  HS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                T  ++    +  +   L+ K             +E+K S L   L   +++     
Sbjct: 1029 DEALTKRQLLEQTLKDLEYELEAKSHLKDDRGRLVKQMEDKVSQLEMEL---EEERNNSD 1085

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E+ + S+  + Q    + +     ++   ++ ++ R   +L         +Y     
Sbjct: 1086 LLSERISRSREQMEQVRNELLQERAARQDLECDKISLERQNKDLKSRIIHLEGSYRSSKE 1145

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTI 292
              + Q +   A+   +L   E+ R    +
Sbjct: 1146 GLVVQMEARIAELEDRLESEERDRANLQL 1174


>gi|329961684|ref|ZP_08299730.1| putative ATP synthase F1, epsilon subunit [Bacteroides fluxus YIT
           12057]
 gi|328531556|gb|EGF58393.1| putative ATP synthase F1, epsilon subunit [Bacteroides fluxus YIT
           12057]
          Length = 391

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 87/251 (34%), Gaps = 25/251 (9%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           VEI+   SG I K  V+ G+ + +G  L + + ++    ++  K +++  +  ++T++  
Sbjct: 57  VEIRPMVSGFITKLHVDEGAVVRKGQVLFSIDPVQYQAAVNSAKAAVETAKAAVNTQELT 116

Query: 117 LD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           ++    LN K  + +   +  E QL     +     +++ N   +  Y S+      +  
Sbjct: 117 VNNKRELNRKNIISDYDLQMAENQLAQTKAQLAQAQAQLVNAQNNLSYTSVTSPSDGVVG 176

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               R+                    +++         +  D+++       +  +L   
Sbjct: 177 TIPYRVG-------------------SLVSPSVANPLTTVADISEMYAYFSMTERQLLAQ 217

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM--SKLTILEKTREQKT 291
           I E    ++ I E   +  L+  +          +      D+   S         +   
Sbjct: 218 IRE-GGSIKEILEKMPDVQLQLIDGTMYADSGRVETISGVIDQTTGSVTMRALFPNKHNV 276

Query: 292 ILSPIAGTIVY 302
           + S   G +V+
Sbjct: 277 LRSGSTGNVVF 287


>gi|328470710|gb|EGF41621.1| putative AcrA/AcrE family protein [Vibrio parahaemolyticus 10329]
          Length = 351

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 45/113 (39%), Gaps = 4/113 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G ++ E +  +I +  +  + +  V+ G ++ QG  L   E  +    +   + ++ + 
Sbjct: 64  PGVVVAEQHA-DIAARLTASVMEVLVKVGDKVKQGDVLARLESDDLDARVRQSEQALSSA 122

Query: 107 RCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  ++    E S +  L NK  + +  F+  E  L      ++   + V    
Sbjct: 123 QAQLNAARKEFSRVRALLNKKLIPQSQFDQAESALQTAQANFNKAQAAVSEAE 175



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 75/226 (33%), Gaps = 15/226 (6%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQ 237
           E  + +   L +S  + L  + +  ++  V      +DL+ + R   ++    +  ++  
Sbjct: 70  EQHADIAARLTASVMEVLVKVGDKVKQGDVLARLESDDLDARVRQSEQALSSAQAQLNAA 129

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +     +  L ++  +  + +  +    L+  Q  F    + ++  E T     I +P  
Sbjct: 130 RKEFSRVRALLNKKLIPQSQF-DQAESALQTAQANFNKAQAAVSEAETTFGYSIITAPFD 188

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I         + A     L+ +  +     I        + +V       V FP Y  
Sbjct: 189 GLITQKPIN-KGDTATPGALLLSMY-NPNSLEIEVNFAESVMPYVTYDKEVDVVFPSYNL 246

Query: 358 IREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITD 395
             +   K +    D         +  +    +    Y +V L +TD
Sbjct: 247 NAQAAVKEVTPSADANSRSYTVKLQFEPPTAIYPGTYAKVALTLTD 292


>gi|296161644|ref|ZP_06844448.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
 gi|295888121|gb|EFG67935.1| secretion protein HlyD family protein [Burkholderia sp. Ch1-1]
          Length = 357

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 66/185 (35%), Gaps = 7/185 (3%)

Query: 20  MTLLSIIGIIGLITWSIL---LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           + LL+ I + G   W++L    P    VS +G I   +  +++ +  +G ++   V+ G 
Sbjct: 12  VALLAAIVVAGYYGWTMLHDSGPAAGFVSGNGRIEATE--IDVATKLAGRVETIAVDEGD 69

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            +  G PL T +       +   +   +       + ++ +    +     E     RE 
Sbjct: 70  FVKAGQPLATMQVTVLDAQLAEARAQHQQAINTALSIEAQVVQRQSDKVAAEAVVSQRES 129

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +L     K     S+  +   +S  + L     R R           + +  +A + + +
Sbjct: 130 ELDAAQRKL--ARSETLSRDGASSMQELDDDRARERGAQATVRAARAQVTAAQAAVDATR 187

Query: 197 KDLTM 201
             L  
Sbjct: 188 AQLVA 192



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/292 (8%), Positives = 79/292 (27%), Gaps = 5/292 (1%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +      R E +    G +      +    ++ +   L     + +      L +E +  
Sbjct: 52  VATKLAGRVETIAVDEGDFVKAGQPLATMQVTVLDAQLAEARAQHQQAINTALSIEAQVV 111

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             ++   + +  ++  ++  +             R    S  EL ++   ++     +  
Sbjct: 112 QRQSDKVAAEAVVSQRESELDAAQRKLARSETLSRDGASSMQELDDDRARERGAQATVRA 171

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
              +     A         L          ++ +  +E       + +P  G + Y +  
Sbjct: 172 ARAQVTAAQAAVDA-TRAQLVAAHSAERAALATVARVEADISDSQLTAPRDGRVQY-RIA 229

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
            +         ++ I   S   Y+   +    +  V  G    V              + 
Sbjct: 230 EAGEVLPAGGKVLNIADLSD-VYMTFFLPETVVGKVALGAEVRVILDAAPTYVIPATVSF 288

Query: 367 IEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +        +  + ++ + +  + V  +I       +   ++ G P      
Sbjct: 289 VASTAQFTPKTVETSSERQKLMFRVKARINRELLLQHLKLVKTGLPGVAWIR 340


>gi|237843561|ref|XP_002371078.1| plectin, putative [Toxoplasma gondii ME49]
 gi|211968742|gb|EEB03938.1| plectin, putative [Toxoplasma gondii ME49]
          Length = 3686

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/224 (12%), Positives = 73/224 (32%), Gaps = 13/224 (5%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
                  L  +        D  +     LR   +  +  L+           AFE R  + 
Sbjct: 2833 KAKQLELELD--AARAETDSLRREALELRDAAECLRMQLETARADQQQAAAAFEDRLRRA 2890

Query: 139  LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +D   + +    +      +    SL+ +L+R ++       L  +    +  L+  + +
Sbjct: 2891 VDEEKEAYFAERRRVEATHAEALTSLRAELSREQADRAAHEKLAEELKACKCALARERGE 2950

Query: 199  LTMMKNLFEKNAV--------SQNDLNQQERIVYKSTL---ELRENIHEQKNMLRHINEL 247
                   +++            + ++  ++  +        EL+E + E ++    ++  
Sbjct: 2951 KEEAARAWQEELTLATRRQEEQEEEMKNKQAEIDVLNAMQDELQEQLEELRSRCSQLSAK 3010

Query: 248  YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +EA     + +  + R L +         S+L  + +   Q++
Sbjct: 3011 EEEAPRGRDDEMAYMQRQLAETVEEKGRLASELATVREVYAQQS 3054



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 9/205 (4%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
            D      + L   ++ +      L    +V  +  E +++QL D      ++  +V +  
Sbjct: 3020 DEMAYMQRQLAETVEEKGRLASELATVREVYAQQSEEQKKQLEDLALSLQASEREVADLQ 3079

Query: 157  ISSVYRSLKMKLTRMRSIYLNRLDLENKSSL---LRALLSSHQKDLTMMKNLFEKNAVSQ 213
                  +L ++  +  +   +   LE K S         ++  +     + L E      
Sbjct: 3080 RRLEAVTLDVERQQQEAKAEHLRALEVKQSECMRKAGEAANASERAEATQRLLEAVQTQL 3139

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE------ISRDLE 267
             +  +    V +    LRE + E++N L   +   +E     A    +      + R+LE
Sbjct: 3140 EEKEKARVAVERELEALREAVVEKENALAAASTKNEELAQVTAELAAQEEHAAALRRELE 3199

Query: 268  QNQRTFADEMSKLTILEKTREQKTI 292
               + FA   + L       E+K++
Sbjct: 3200 AQAQQFAASEATLQAALSEAEKKSL 3224



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 72/215 (33%), Gaps = 18/215 (8%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E     +      + L        ++   L       EK   + E ++ + L  + +  S
Sbjct: 3183 ELAAQEEHAAALRRELEAQAQQFAASEATLQAALSEAEKKSLACEARMREELQNHVAAAS 3242

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDL-------ENKSSLLRALLSSHQKDLTMMK 203
            ++     S +   L+ +  ++ +    +L         E  + +L+A  +  ++     +
Sbjct: 3243 RIKAEEESRMQFVLEQEKKKVAAEEAEKLRKTFERLWDEESAKMLQAYEAVARQLAEAQR 3302

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTL----------ELRENIHEQKNMLRHINELYDEANL 253
             +  K      ++ ++E    ++ L          ELRE +  +   L  +     E   
Sbjct: 3303 AMHAKG-EELEEVKKREAEARRAALDATQEASEVQELREKLAARDAELSELRSANKEQTE 3361

Query: 254  EFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            E A      +R  E+  R       +   LEK RE
Sbjct: 3362 ELATVRANQTRLAEEAARQREALEKQRDTLEKERE 3396



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 67/204 (32%), Gaps = 3/204 (1%)

Query: 80   QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            +G  + T +          +  +  +L   ++ E   +     +      A +++E +L 
Sbjct: 2585 EGAAVATEDLCMEVARSRAELATKASLVARLEAE---VQEQQTRVRDFRDALDAKERELE 2641

Query: 140  DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
            +  G       ++ +     +    + +     +   +    +  +    +   S Q++ 
Sbjct: 2642 NAAGALRGLHVQLDSERNQRMQSEEEQRRREREAAEHHEAVTKALAREKDSEALSRQQET 2701

Query: 200  TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++   EK       ++ +     +S    RE           + E       E+  ++
Sbjct: 2702 QELRAEIEKVQARLERVHGELEGARESLRSAREEAEHHAAEKASLKEKEMHLQEEWNRHV 2761

Query: 260  KEISRDLEQNQRTFADEMSKLTIL 283
              ++ +LE  +   A E ++L+  
Sbjct: 2762 TSLTDELEAVRAMHASEKAQLSEA 2785


>gi|198275255|ref|ZP_03207786.1| hypothetical protein BACPLE_01414 [Bacteroides plebeius DSM 17135]
 gi|198271838|gb|EDY96108.1| hypothetical protein BACPLE_01414 [Bacteroides plebeius DSM 17135]
          Length = 414

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 43/110 (39%), Gaps = 3/110 (2%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           ++     VEI+   SG I +  V+ G+++ +G  L   + +     +     ++K+    
Sbjct: 95  VVKGRQSVEIRPQVSGTITEICVKEGAKVHKGQVLFVIDQVPYKAALQTALANVKSAEAA 154

Query: 110 IDTEK---SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + T +    + + L  +  V +   ++ +  LL+         +   N  
Sbjct: 155 VATARLTFDSKEELFKERVVSDFDRQTAQNSLLEAEASLAQAKANETNAR 204



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 35/115 (30%), Gaps = 13/115 (11%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD---------LEQNQRTFADEM 277
              L+  +   K+    +       + +   + + +  D         L + + + A   
Sbjct: 138 KAALQTALANVKSAEAAVATARLTFDSKEELFKERVVSDFDRQTAQNSLLEAEASLAQAK 197

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHSKLTYI 330
           +  T          + SP+ G +    S+        S   PL+  V   +  Y+
Sbjct: 198 ANETNARNDLSYTVVRSPVDG-VAGMSSYRVGALVNSSITTPLLT-VSDDEEVYV 250


>gi|107027027|ref|YP_624538.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116691776|ref|YP_837309.1| RND family efflux transporter MFP subunit [Burkholderia cenocepacia
           HI2424]
 gi|105896401|gb|ABF79565.1| secretion protein HlyD [Burkholderia cenocepacia AU 1054]
 gi|116649776|gb|ABK10416.1| efflux transporter, RND family, MFP subunit [Burkholderia
           cenocepacia HI2424]
          Length = 489

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/308 (11%), Positives = 93/308 (30%), Gaps = 31/308 (10%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K+  D  +  +   + A    + QL                     +   +K    R   
Sbjct: 135 KAGNDAASFPFARADGAIALTDAQLATSKIALAKAGPAQIATPF-QLPGEIKFNEDRTAH 193

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMM--KNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           +      +  + S+      +  + L ++   +L ++    +++L   ER +  +     
Sbjct: 194 VVPRVAGIVEQVSVSLGQNVAKGQVLAVIASTDLADR----RSELLTAERRLSGA----- 244

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              +E++  L       ++   +    L+E    ++  ++  A   + +        +  
Sbjct: 245 RATYERERTLWKERISAEQDYQQAQVQLREAEIAVQNARQKLAALNAPVGAGA--LNRYE 302

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +P AGTIV   + +       +   M ++      +    V  +++  V+ G  ATV 
Sbjct: 303 LRAPFAGTIVEKHA-TPGEAI-AADASMFVISDLSTVWAEMAVPAQRLNDVRVGRDATVS 360

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              +              +  ++ +Q                  +   + +   R G   
Sbjct: 361 ATAFESRSSGPIA----YVGSLLGEQTRTA-----------PARVVLPNPDRVWRPGMFV 405

Query: 412 EVLFTAKN 419
            V   A  
Sbjct: 406 NVSVDAGR 413



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 32/101 (31%), Gaps = 3/101 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLN 121
           GI+++  V  G  + +G  L      +  D       + + L   R   + E++      
Sbjct: 200 GIVEQVSVSLGQNVAKGQVLAVIASTDLADRRSELLTAERRLSGARATYERERTLWKERI 259

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +     ++A     E  +          +     G  ++ R
Sbjct: 260 SAEQDYQQAQVQLREAEIAVQNARQKLAALNAPVGAGALNR 300


>gi|293397168|ref|ZP_06641442.1| heat shock protein HtpX [Serratia odorifera DSM 4582]
 gi|291420639|gb|EFE93894.1| heat shock protein HtpX [Serratia odorifera DSM 4582]
          Length = 331

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 82/227 (36%), Gaps = 19/227 (8%)

Query: 195 HQKDLTMMKNLFEKNAVS---QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
             +++  +++   +   +    +   ++++ ++  +    + + + +            A
Sbjct: 106 RAEEIAQVRSEMAQKLSAFNYADSFLKRQQGLWAKSATSADALEDARTARNQAQANLQAA 165

Query: 252 NLEFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
             + A YL     +++EQ +   A   + L   +   +   +LSP AGT++  ++     
Sbjct: 166 KDKLAQYLSGNRPQEIEQAKAEVAQAQASLAQAQLDVQDTGLLSPSAGTVLT-RAVEPGT 224

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
               S  +  +   +   ++RA V+   +     G    +   +      K +   I  +
Sbjct: 225 MLSASSTVFTLS-LTTPVWVRAYVSEASLGQAAPGTELEI---YTDGRPGKPYHGKIGFV 280

Query: 371 DPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
            P       S +  +L+T   Y + + +TD         LR G P  
Sbjct: 281 SPTAEFTPKSVETTDLRTDLVYRLRVIVTDADDG-----LRQGMPVT 322



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 34/307 (11%), Positives = 82/307 (26%), Gaps = 51/307 (16%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +    V+ G  +  G  L   +D                 R  +   K+ +     +
Sbjct: 52  SGRLSSLTVDEGDTVQPGQLLGKLDDGP--------------YRNALQQAKANVGSAQAR 97

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             +L   + + E   +        +     +  +           T   ++   R     
Sbjct: 98  LALLLAGYRAEEIAQVRSEMAQKLSAFNYADSFLKRQQGLWAKSATSADALEDARTARNQ 157

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             + L+A      + L+  +               QE    K+ +   +    Q  +   
Sbjct: 158 AQANLQAAKDKLAQYLSGNRP--------------QEIEQAKAEVAQAQASLAQAQLDVQ 203

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
              L   +         E    L  +   F   ++    +     + ++     GT    
Sbjct: 204 DTGLLSPSAGTVLTRAVEPGTMLSASSTVFTLSLTTPVWVRAYVSEASLGQAAPGT--EL 261

Query: 304 QSFSSSNYAQQSQP----LMKIVPHSK-------------LTYIRAKVTPKQIQH-VKKG 345
           + ++     +  +P    +  + P ++                 R +V        +++G
Sbjct: 262 EIYTDG---RPGKPYHGKIGFVSPTAEFTPKSVETTDLRTDLVYRLRVIVTDADDGLRQG 318

Query: 346 YTATVRF 352
              T+RF
Sbjct: 319 MPVTLRF 325


>gi|253699620|ref|YP_003020809.1| efflux transporter RND family, MFP subunit [Geobacter sp. M21]
 gi|251774470|gb|ACT17051.1| efflux transporter, RND family, MFP subunit [Geobacter sp. M21]
          Length = 405

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 95/282 (33%), Gaps = 34/282 (12%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM---K 203
           +T S V+     S+  +    + + ++   ++     +   ++      Q +L      +
Sbjct: 57  ATVSLVYPSQTFSLLNASGYVVAQRKAAVSSKATGRLEWLGVQEGSVVRQGELLARLENR 116

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY----- 258
           ++  +   ++  ++  E+ + ++ +E +    +    L  + EL  +  +  A+Y     
Sbjct: 117 DVAAQKGEAEASVSAAEKNLEQARVEQK----DAARNLARMKELVSQGIVAQADYDTAEA 172

Query: 259 -LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ--- 314
             +         Q       S L   E + +   I +P  G ++   +    +       
Sbjct: 173 RYQRAVASSAAAQANLKGASSALQGAEASLDYTLIRAPFDGVVLTKNAD-VGDIVSPLAA 231

Query: 315 -SQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
            +     +V  +      + A V+   +  V+ G    +      + R   F+  ++ I 
Sbjct: 232 AANAKAAVVTLADMGSLEVEADVSEANLGKVRVGQPCEILLDALPEAR---FRGALQTIV 288

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
           P   +   ++       V ++     F D +  +     A+V
Sbjct: 289 PTADRSKGSVM------VKVR-----FLDQDQRILPEMSAKV 319



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 30/69 (43%), Gaps = 1/69 (1%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           +SG ++ +     + S  +G ++   V+ GS + QG  L   E+ +        + S+  
Sbjct: 73  ASGYVVAQRKA-AVSSKATGRLEWLGVQEGSVVRQGELLARLENRDVAAQKGEAEASVSA 131

Query: 106 LRCHIDTEK 114
              +++  +
Sbjct: 132 AEKNLEQAR 140


>gi|53804521|ref|YP_113822.1| HlyD family secretion protein [Methylococcus capsulatus str. Bath]
 gi|53758282|gb|AAU92573.1| HlyD family secretion protein [Methylococcus capsulatus str. Bath]
          Length = 387

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 64/194 (32%), Gaps = 15/194 (7%)

Query: 45  SSSGEILN----EDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
              G +        N   IK+        G ++K     G  + +G  L   +       
Sbjct: 39  PVVGPVTPYLELTGNTQAIKTVELRARVEGYLEKILFREGEIVREGQLLFLIQQNTYQAK 98

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   K  +   +  +   ++       ++  L K   + +  +  +  +  S  + V   
Sbjct: 99  LKEAKAQVLADKARLMHAETEF----ARFSGLLKQNAAAQTDVDRWHYERDSAQAAVMAS 154

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
             +     L +  T +R+ +  R    L++  +L+ A   +   ++  +  ++    +S+
Sbjct: 155 EANVELAQLNLSYTEVRAPFTGRAGRRLKDPGNLVGAGEKTVLAEINQIDPIYAYFTISE 214

Query: 214 NDLNQQERIVYKST 227
           +DL +         
Sbjct: 215 HDLLRVRGQHQDEA 228


>gi|332162530|ref|YP_004299107.1| HlyD family secretion protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666760|gb|ADZ43404.1| HlyD family secretion protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 402

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 83/266 (31%), Gaps = 37/266 (13%)

Query: 182 ENKSSLLRALLSSHQKDLTMM--KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE--Q 237
             K   + A +S   K L +   + + +   V++ D   Q+  +  +   L+  + +   
Sbjct: 60  AQKQVTVGAQVSGQIKALHVTLGQQVEKGQLVAEIDDLTQQNALKDAEEALKNVLAQRAA 119

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ-------- 289
           K   +  N+L  +   +       +  D +  + T     +++  L+    Q        
Sbjct: 120 KEATQKNNQLTYQRQQQILAKGLGVRADFDSAKATLESTQAEIKALDAQIAQAEIAVSTA 179

Query: 290 ------KTILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                   I SPI GT+V             Q +  ++K V       + A+++   +  
Sbjct: 180 KLNLGYTKITSPINGTVVAIPVEEGQTVNAVQSAPTIIK-VAQLDTMTVEAQISEADVVK 238

Query: 342 VKKGYTA--------TVRFPHYADIREKK---FKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           VK G             RF       E                 S   ++  T  YY  +
Sbjct: 239 VKAGMPVYFTILGEPEERFSATLRAIEPAPDSINDKTTTTSSSSSSSSSSTTTAIYYNGL 298

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFT 416
             +     ++ N  LR    A+V   
Sbjct: 299 FDV-----ANPNGALRISMTAQVYIV 319



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 52/153 (33%), Gaps = 17/153 (11%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V + G I  +  V  + +  SG IK   V  G Q+ +G  +   +D+   + +   
Sbjct: 48  LEQTVLADGTIKAQKQV-TVGAQVSGQIKALHVTLGQQVEKGQLVAEIDDLTQQNALKDA 106

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++KN+      +++                  +  QL     +              S
Sbjct: 107 EEALKNVLAQRAAKEA----------------TQKNNQLTYQRQQQILAKGLGVRADFDS 150

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              +L+     ++++       E   S  +  L
Sbjct: 151 AKATLESTQAEIKALDAQIAQAEIAVSTAKLNL 183


>gi|325923629|ref|ZP_08185259.1| multidrug resistance efflux pump [Xanthomonas gardneri ATCC 19865]
 gi|325545895|gb|EGD17119.1| multidrug resistance efflux pump [Xanthomonas gardneri ATCC 19865]
          Length = 328

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 87/299 (29%), Gaps = 58/299 (19%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI-VYKSTLE 229
             S Y+ ++ +++ + +    L +   D    + L  + A +Q    Q  R    +    
Sbjct: 35  QVSGYVTQVPVQDFAHVKHGQLLAKIDDRIYAQQL--EQAKAQVQTAQANRSNWDQQRHS 92

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT----------------- 272
               I EQ+  L       D     +A   +  SR L   Q                   
Sbjct: 93  ADATIAEQRAALSSNQAQRDRTRSAYARTQQLASRQLVSEQDRDTAFAARAQADAGVAQA 152

Query: 273 -----FADEMSK-------------------LTILEKTREQKTILSPIAGTIVYNQSFSS 308
                 A+E ++                   + + +   +   I++P  G +        
Sbjct: 153 RAAVQAAEENARSVTVNRAALEAAVANAQAAVQLAQINLDNTRIVAPRDGQLGQLGVR-Q 211

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
             Y      LM +VP     +I A     Q+  ++ G  A+       + R       ++
Sbjct: 212 GAYVTNGTQLMSLVP--DTLWIVANFKETQMAKIRIGQPASFTVDALNNAR---LHGRVQ 266

Query: 369 KIDPIISQQ----DNNLQTQEYYEVILKITDLAFSDNN----IELRNGFPAEVLFTAKN 419
           +I P    +      +  T  + ++  +I      D        LR G    V     +
Sbjct: 267 EISPAAGSEFSVLPADNATGNFVKIAQRIPLRISVDPGQPLAARLRAGMSVVVAIDTGS 325



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 11/117 (9%), Positives = 36/117 (30%), Gaps = 7/117 (5%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +    +  I    SG + +  V++ + +  G  L   +D        +    ++  +  +
Sbjct: 24  MVHGQITVIAPQVSGYVTQVPVQDFAHVKHGQLLAKIDD-------RIYAQQLEQAKAQV 76

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            T ++     + +    +     +   L     +   T S        +  + +  +
Sbjct: 77  QTAQANRSNWDQQRHSADATIAEQRAALSSNQAQRDRTRSAYARTQQLASRQLVSEQ 133


>gi|324499752|gb|ADY39902.1| Major antigen [Ascaris suum]
          Length = 1059

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 18/211 (8%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
              +       I      IK+LR   +  ++    L  + +V + +    E ++ D  G+
Sbjct: 526 FELQARGKEAQIRHLNEQIKSLRTEAENAQAEARSLREREEVWDTSKFKLESKMRDHEGE 585

Query: 145 YH--STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK-DLTM 201
               S     F     S+  S+K   +++++      DL +    L+  LS  +  ++ +
Sbjct: 586 SQRVSILMSSFETERQSLNESVKKLASQLQASEGKNADLRDDVEKLKRDLSKAESLEVEL 645

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            ++L EK  V+Q                LRE +   K+ L + N    +   E      E
Sbjct: 646 RRSLEEKTRVAQ------------DASGLREQLSIAKSDLANANSRKQQLESELLTVRSE 693

Query: 262 ISRD---LEQNQRTFADEMSKLTILEKTREQ 289
           +      L       +D   +L   +  + +
Sbjct: 694 LREQKQHLNDASNRLSDLQRQLVDAQNEKNR 724


>gi|332160340|ref|YP_004296917.1| putative type I secretion protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604427|emb|CBY25925.1| macrolide-specific efflux protein MacA [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325664570|gb|ADZ41214.1| putative type I secretion protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860226|emb|CBX70545.1| hypothetical protein YEW_IR37590 [Yersinia enterocolitica W22703]
          Length = 391

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 50/142 (35%), Gaps = 11/142 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     V  + +  +G + K  V+ G ++ +G  L   +     + +   
Sbjct: 51  IERNVMATGSLKPSLQV-NVGAQVNGQLTKLYVKQGDRVTRGQLLAEIDPTLQQNELRKS 109

Query: 100 KVSI----------KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +  +          + L      E      L  +   ++ A E    Q    L + H   
Sbjct: 110 EAELQSAQAQKQASQALLRQYLLEFRRQQTLAKEGSGVKSALEKAHAQYDSQLAQLHVNE 169

Query: 150 SKVFNYGISSVYRSLKMKLTRM 171
           +++    ++       +  TR+
Sbjct: 170 AQIVQSQMAMETAKANLGFTRI 191



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 80/269 (29%), Gaps = 20/269 (7%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           S+  SL++ +    +  L +L ++    + R  L +          L +    S+ +L  
Sbjct: 60  SLKPSLQVNVGAQVNGQLTKLYVKQGDRVTRGQLLAEIDPTLQQNELRK----SEAELQS 115

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINEL--YDEANLEFANYLKEISRDLEQNQRTFADE 276
            +     S   LR+ + E +       E      A  +           L  N+      
Sbjct: 116 AQAQKQASQALLRQYLLEFRRQQTLAKEGSGVKSALEKAHAQYDSQLAQLHVNEAQIVQS 175

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKV 334
              +   +       I++PI G ++             SQ  P + ++ +     +  ++
Sbjct: 176 QMAMETAKANLGFTRIMAPIDGEVLGI-VTKEGQTIVSSQTAPTILVLANVDTMTVHTRI 234

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE------YYE 388
           +   I  V  G           + R       I++       +D++           YY 
Sbjct: 235 SETDILKVSVGQPLWFYVVADPERRYDSRMDAIQEASAESLHEDSSGSANSQQPSAVYYN 294

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTA 417
            I  I +         LR    A+V    
Sbjct: 295 GIFNIANQERL-----LRTSMTAQVFIIT 318


>gi|311256764|ref|XP_003126797.1| PREDICTED: liprin-alpha-2-like [Sus scrofa]
          Length = 1320

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 65/206 (31%), Gaps = 4/206 (1%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D +  + + +    +  L   +        F+  K     K  +  +++         S 
Sbjct: 170 DEKVRERLRVSLERVSALEEELAAANQETLFMAEKPSRRRKGVDEPKQEGEGERLSNGSI 229

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            S      I  +   L+ +   M  +      L ++   +     + +KDL   + +  K
Sbjct: 230 DSTDDTSQIVELQELLEKQNYEMAQMKERLAALSSRVGEVEQEAETARKDLIKTEEMNTK 289

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                 +   Q+  + +    L +     +     I+++ D+   E AN        L Q
Sbjct: 290 YQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANK----EAILRQ 345

Query: 269 NQRTFADEMSKLTILEKTREQKTILS 294
            +        +L + E+  +Q    +
Sbjct: 346 MEEKNRQLQERLELAEQKLQQTMRKA 371



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 87/238 (36%), Gaps = 22/238 (9%)

Query: 74  NGSQILQGTPLLTFED---IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            G ++  G+   T +    +E  +L++ +   +  ++  +    S +  +  + +   K 
Sbjct: 220 EGERLSNGSIDSTDDTSQIVELQELLEKQNYEMAQMKERLAALSSRVGEVEQEAETARKD 279

Query: 131 FESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
               EE    +        ++       I+++ +          SI+     LEN+ +  
Sbjct: 280 LIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANK 339

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER---IVYKSTLELRENIHE--------- 236
            A+L   ++     + L E+  +++  L Q  R    + +   EL + I           
Sbjct: 340 EAILRQMEEK---NRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHG 396

Query: 237 -QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +  +RH+    +E N E     ++  +  E++ +  +D + +L      R Q  + 
Sbjct: 397 NIEERMRHLEGQLEEKNQEL-QRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLK 453


>gi|311279491|ref|YP_003941722.1| secretion protein HlyD family protein [Enterobacter cloacae SCF1]
 gi|308748686|gb|ADO48438.1| secretion protein HlyD family protein [Enterobacter cloacae SCF1]
          Length = 284

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/153 (9%), Positives = 40/153 (26%), Gaps = 12/153 (7%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPI----EISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
                + + ++  I   + W+  +      +  V +  ++     V       SG I + 
Sbjct: 5   KYFSTLLVAALAIIAVWLVWNYYMQSPWTRDGKVRAE-QVSVTPQV-------SGSIVEL 56

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V +  ++  G  L   +D      +   +  +   +  +   +   D           A
Sbjct: 57  NVRDNQRVSAGDVLFRLDDTPYRIAVMTAQAQLAKAQTELAKARHEADRRQGLPKNFISA 116

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            +     +     K +   +             
Sbjct: 117 EDLDTVNIALQAAKANVEAANAALEHARWQQEQ 149



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 20/170 (11%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  +   +  + K+  EL +  HE                   A  L  ++  L+  +  
Sbjct: 79  RIAVMTAQAQLAKAQTELAKARHEADRRQGLPKNFIS------AEDLDTVNIALQAAKAN 132

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI-- 330
                + L      +EQ  + +P+ G +    +    +YA    P+  +V       +  
Sbjct: 133 VEAANAALEHARWQQEQTVVKAPVDGWVTNMSTR-PGDYAAVGHPVFALVDSHSFYVVGY 191

Query: 331 --RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
               K+  + I     G  AT+          +  +  +  I   I+ Q 
Sbjct: 192 FEETKL--RHIG---PGDKATIVL----YSNNQTLQGHVSSIGRAINDQS 232


>gi|298370129|ref|ZP_06981445.1| RecF/RecN/SMC N domain-containing protein [Neisseria sp. oral taxon
           014 str. F0314]
 gi|298281589|gb|EFI23078.1| RecF/RecN/SMC N domain-containing protein [Neisseria sp. oral taxon
           014 str. F0314]
          Length = 1161

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +++    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQMQRIHQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|289674796|ref|ZP_06495686.1| secretion protein HlyD [Pseudomonas syringae pv. syringae FF5]
          Length = 337

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 99/295 (33%), Gaps = 22/295 (7%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +  + L    +     + V   G+    + + +       +   +++L +K   ++    
Sbjct: 31  KPPEYLTAKVERTEIENSVLASGVLQGIKQVDVGAQVSGQLKSLKVNLGDK---VKQGQW 87

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             + D  +++N   ++ V++ +L  Q+        + +      K +    ++   + + 
Sbjct: 88  LAEIDPVVLQNTLRQSQVNEQNLIAQKDAAVAQLKDAKAIYQRYKQL--RADDAISQKDF 145

Query: 254 EFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           + A    E+   +L   +    D   ++           I++PI+G +V           
Sbjct: 146 DTAQSDFEVRSANLRSLEAQVRDARIQIETARINLGYTRIVAPISGDVVGI-VTQEGQTV 204

Query: 313 QQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD---IREKKFKAII 367
             SQ  P++  +       ++A+V+   + H+  G    V F    D       K K   
Sbjct: 205 IASQLTPVILKLADLDTMTVKAQVSEADVIHITPGQ--EVYFTILGDAEKRYYAKLKGTE 262

Query: 368 EKIDPIISQQDNNLQTQE---YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 +  Q +N        +Y  +  +      + +  LR    A+V    + 
Sbjct: 263 PAPQNFLDSQSSNASKPNSAVFYNALFDVP-----NPDHRLRISMTAQVHIVREK 312



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 75/193 (38%), Gaps = 14/193 (7%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE SV +SG +     V ++ +  SG +K  +V  G ++ QG  L   + +   + + 
Sbjct: 43  TEIENSVLASGVLQGIKQV-DVGAQVSGQLKSLKVNLGDKVKQGQWLAEIDPVVLQNTLR 101

Query: 98  LKKVSIKNLRCHIDTEKSAL----------DFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +V+ +NL    D   + L            L     + +K F++ +           S
Sbjct: 102 QSQVNEQNLIAQKDAAVAQLKDAKAIYQRYKQLRADDAISQKDFDTAQSDFEVRSANLRS 161

Query: 148 TCSKVFNYGISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             ++V +  I      + +  TR+    S  +  +  +   +++ + L+     L  +  
Sbjct: 162 LEAQVRDARIQIETARINLGYTRIVAPISGDVVGIVTQEGQTVIASQLTPVILKLADLDT 221

Query: 205 LFEKNAVSQNDLN 217
           +  K  VS+ D+ 
Sbjct: 222 MTVKAQVSEADVI 234


>gi|126457561|ref|YP_001075859.1| multidrug resistance protein [Burkholderia pseudomallei 1106a]
 gi|126457840|ref|YP_001074768.1| multidrug resistance secretion protein [Burkholderia pseudomallei
           1106a]
 gi|126231329|gb|ABN94742.1| multidrug resistance protein [Burkholderia pseudomallei 1106a]
 gi|126231608|gb|ABN95021.1| multidrug resistance protein [Burkholderia pseudomallei 1106a]
          Length = 489

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 4/152 (2%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R      +   E +   K+ L +       A  +        S    +         ++ 
Sbjct: 245 RAGASVEVVAPEELARAKSSLANAQAALAGAQAQREAARALGSERPVEQNPAVQQAAAQF 304

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +  +  ++ TI+SP+ GT+   +S           PLM +V   +  ++ A     Q++
Sbjct: 305 KLAYRNLKRTTIVSPVDGTV-GQRSVQIGQQVGPGGPLMSVV-QLRQVWVEANFKEGQLR 362

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           H++ G    +    Y       +   +E    
Sbjct: 363 HMRVGQPVRLESDLYGARVT--YHGRVEGFSA 392



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 68/214 (31%), Gaps = 15/214 (7%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
               +L+I+ +   + W I+           +     NVV+I +   G +    V +  Q
Sbjct: 125 WFFGVLAIVALGAALYWFIVGRFSEETD---DAYVAGNVVQIAAQIQGTVTDVLVADTQQ 181

Query: 78  ILQGTPLLTFEDIETTDLIDLKKV-------SIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +  G  L+  +D E        +         + N R  + T +  +        + ++A
Sbjct: 182 VKAGQALVRLDDAEAAAAFAQAQAQLAQAVRQVANTRLSMQTYEQTVKAREADLKLAQQA 241

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           + +R    ++ +        ++     S       +   + +      L  E       A
Sbjct: 242 YRARAGASVEVVA-----PEELARAKSSLANAQAALAGAQAQREAARALGSERPVEQNPA 296

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           +  +  +     +NL     VS  D    +R V 
Sbjct: 297 VQQAAAQFKLAYRNLKRTTIVSPVDGTVGQRSVQ 330


>gi|304388228|ref|ZP_07370348.1| SMC structural maintenance of chromosomes partitioning protein
           [Neisseria meningitidis ATCC 13091]
 gi|304337755|gb|EFM03904.1| SMC structural maintenance of chromosomes partitioning protein
           [Neisseria meningitidis ATCC 13091]
          Length = 1161

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 70/206 (33%), Gaps = 11/206 (5%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +     +  +K+ R H+       + L  + + LEK  E+ E        + +     +
Sbjct: 174 KERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAER-YKSLTAQLNQQQDLL 232

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR----ALLSSHQKDLTMMKNLFEK 208
                     +      + +S+   + +   +   L     AL ++ Q     +  L  K
Sbjct: 233 DYAQWQQSLAAADKATAQHQSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNK 292

Query: 209 NAVSQNDLNQQE---RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN---YLKEI 262
             V +  + + E   R        +  +    +  L+ I++   +  ++      Y++E 
Sbjct: 293 RGVLREQIARLEEQIRHRQNLHQRIERDKQAAQAQLQRIHQEQQQIRVQLEENELYVEEK 352

Query: 263 SRDLEQNQRTFADEMSKLTILEKTRE 288
             +L +     A+   +L  LE+ + 
Sbjct: 353 QTELAEWAMQVAEHEERLPELEEAQA 378


>gi|297481405|ref|XP_002692090.1| PREDICTED: kinesin family member 16B [Bos taurus]
 gi|296481545|gb|DAA23660.1| kinesin family member 16B [Bos taurus]
          Length = 1339

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 64/204 (31%), Gaps = 1/204 (0%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             LI+  +   K+ +  ++  +  ++    + ++ ++    +EE L        ST   +
Sbjct: 657 RKLIEEMEEKQKSDKAALERMQQEVETQRQETEMAQRQIRKQEESLKRRSSHLESTLKDL 716

Query: 153 FNYGIS-SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                     R  + + T ++               L+ L   +  +      +F++   
Sbjct: 717 LAEKERFEEARQREQQETELQKKKQEEERFLRVQEELQRLQELNSHEKAEKVQIFQELER 776

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            + +  +Q   + +    L E   EQ   +  +               +  ++ L + +R
Sbjct: 777 LKREKEEQYAKLEQEKQRLEEQEREQVLRVAQLEAQLRAKQQLLQPPQRGEAQRLAEERR 836

Query: 272 TFADEMSKLTILEKTREQKTILSP 295
                 + L    +   +    SP
Sbjct: 837 HLEGIRTALLQAREAGAEAGGDSP 860



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 11/178 (6%)

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            L+F   + + LEK    R+  L++ + +   +           V    +      R I 
Sbjct: 639 GLEFERQQREELEKLESKRK--LIEEMEEKQKSDKAALERMQQEVETQRQETEMAQRQIR 696

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                L+ +SS L + L            L EK    +    +Q+    +   +  E   
Sbjct: 697 KQEESLKRRSSHLESTLKDL---------LAEKERFEEARQREQQETELQKKKQEEERFL 747

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             +  L+ + EL      E     +E+ R   + +  +A    +   LE+   ++ + 
Sbjct: 748 RVQEELQRLQELNSHEKAEKVQIFQELERLKREKEEQYAKLEQEKQRLEEQEREQVLR 805


>gi|291613601|ref|YP_003523758.1| efflux transporter, RND family, MFP subunit [Sideroxydans
           lithotrophicus ES-1]
 gi|291583713|gb|ADE11371.1| efflux transporter, RND family, MFP subunit [Sideroxydans
           lithotrophicus ES-1]
          Length = 387

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 87/280 (31%), Gaps = 45/280 (16%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L     SR + +L   G +      +       +   L      +     +      + S
Sbjct: 62  LAPTMTSRVKAVLVDQGDHVVAGQVLAEMDPVDLNEKLIGSQRMVEKTANSIQAATAQVS 121

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             ++ L      +     L  K  VSQ+  + ++  +  +T  L                
Sbjct: 122 EAQSRLKMVSATVNRYLELRGKGFVSQDMFDAKQHEMNAATSAL---------------- 165

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                             +L   +   A   + +  + K R Q  ++SP+ G ++  +  
Sbjct: 166 -------------TVAEANLAAAREEHARAQADMRGIGKARAQTRLISPVNGVVIA-RLV 211

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
            S +     Q +++++    + ++  ++  +Q   ++ G TA V         +      
Sbjct: 212 ESGSTVAGGQVVLQVI-DPDILWVETRIAQQQAGQIRVGQTAQVIL---RSRPQAPVAGK 267

Query: 367 IEKIDPIISQ-----------QDNNLQTQEYYEVILKITD 395
           + ++D +                 N    EY EV +K+ +
Sbjct: 268 VARLDMVSDAVTEERIVNVLIDVANASVGEYAEVTIKLPE 307



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 26/230 (11%), Positives = 73/230 (31%), Gaps = 16/230 (6%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +K   V+ G  ++ G  L   + ++  + +   +  ++     I    + +        
Sbjct: 69  RVKAVLVDQGDHVVAGQVLAEMDPVDLNEKLIGSQRMVEKTANSIQAATAQV-------- 120

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                 +SR + +   + +Y     K F       +    +    + +     N      
Sbjct: 121 ---SEAQSRLKMVSATVNRYLELRGKGFVSQDMFDAKQHEMNAATSALTVAEANLAAARE 177

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +  +A +    K     + +   N V    L +    V    + L+    +   +   
Sbjct: 178 EHARAQADMRGIGKARAQTRLISPVNGVVIARLVESGSTVAGGQVVLQVIDPDILWVETR 237

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           I +      +      + I R   + Q   A ++++L ++     ++ I+
Sbjct: 238 IAQQQA-GQIRVGQTAQVILR--SRPQAPVAGKVARLDMVSDAVTEERIV 284


>gi|212702873|ref|ZP_03311001.1| hypothetical protein DESPIG_00906 [Desulfovibrio piger ATCC 29098]
 gi|212673735|gb|EEB34218.1| hypothetical protein DESPIG_00906 [Desulfovibrio piger ATCC 29098]
          Length = 336

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/315 (11%), Positives = 89/315 (28%), Gaps = 81/315 (25%)

Query: 17  LKRMTLLSIIGII--GLITWSILLPIEIS---VSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           ++R  L +++G++  G+   ++   +++        GE+  +   +++ + FS  +    
Sbjct: 2   MRRFLLPTVLGLVAAGIAVMALSGLLDVGGENSFIQGEM--DGTRIDVAAKFSARVAATP 59

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             +G+ + QG  LL  +  E    +   +  ++  R  ++                    
Sbjct: 60  GRDGAPVRQGDLLLRLDGTEMEARVLQTRQELERARAQLE-------------------- 99

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
                              K  N       R L  +     +          +  +    
Sbjct: 100 -------------------KALNGTREKEIRRLHQQHQEAVAALALAEKTHARCRV---- 136

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                        L  + AVS    ++       +   L +    ++ M   + E    +
Sbjct: 137 -------------LHAQQAVSTQRYDE-------AVNALTQARARERAMKAALEEAVTGS 176

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             E          D+   +       ++L  +E       + SP+ G I           
Sbjct: 177 RQE----------DIAAARAATQALEARLQEVESMARDVELRSPVDGEISKVLVD-VGEL 225

Query: 312 AQQSQPLMKIVPHSK 326
                PL+ ++    
Sbjct: 226 VAPGYPLVTLIELDD 240


>gi|254416888|ref|ZP_05030636.1| chromosome segregation protein SMC [Microcoleus chthonoplastes PCC
           7420]
 gi|196176252|gb|EDX71268.1| chromosome segregation protein SMC [Microcoleus chthonoplastes PCC
           7420]
          Length = 1274

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/245 (11%), Positives = 86/245 (35%), Gaps = 20/245 (8%)

Query: 44  VSSSGEILNEDNVVEIKSPF--SGIIKKFQVENGSQIL-QGTPLLTFEDIETTDLIDLKK 100
             S  ++  E +  +I+        ++    +N  ++      L      +     + + 
Sbjct: 759 TRSQTQLRLEQSRKDIQGLTEQQTQVRSLLAKNTQEVQTAAERLQQLN--QDLPAQERQL 816

Query: 101 VSIKNLRCHIDTEKSALD--FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYG 156
            +++     ++ E++  +   + ++    E     RE+ L +   +  +  ++    N  
Sbjct: 817 QALREQLAQLEAEQTPQEWQQIQSQIKTQEAVLGDREQALREAEKQLQALENQHQRTNEQ 876

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +++ Y+ +    T+ +SI   + ++  +   +   +   Q  LT ++            L
Sbjct: 877 LATSYQRIAEYQTQHQSIQEQQAEINRQLEAIEVQIEQTQARLTQLEQ----------RL 926

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + ++   +    LR     Q+ +     +   E  +     L  +   LE  Q    D 
Sbjct: 927 GEAKQERDRVEAILRNQHLNQQKLSWQ-RQKLQETQVTRQEKLTTLQTQLEIQQAELPDP 985

Query: 277 MSKLT 281
           + +++
Sbjct: 986 LPEVS 990



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 70/204 (34%), Gaps = 9/204 (4%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L   ++    +    K+++           ++ L    ++ D+  +    ++ Q+   L 
Sbjct: 732 LKRCDEWLERESATAKQLTQTLTDARETRSQTQLRLEQSRKDI--QGLTEQQTQVRSLLA 789

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           K ++   +     +  + + L  +  +++++      LE + +         Q  +   +
Sbjct: 790 K-NTQEVQTAAERLQQLNQDLPAQERQLQALREQLAQLEAEQTPQEWQ--QIQSQIKTQE 846

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            +       +  L + E+ +     + +    +     + I E   +          EI+
Sbjct: 847 AVLGD---REQALREAEKQLQALENQHQRTNEQLATSYQRIAEYQTQHQS-IQEQQAEIN 902

Query: 264 RDLEQNQRTFADEMSKLTILEKTR 287
           R LE  +       ++LT LE+  
Sbjct: 903 RQLEAIEVQIEQTQARLTQLEQRL 926



 Score = 40.0 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 47/140 (33%), Gaps = 2/140 (1%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
               +  + ++   R   D   SA +      + L +  E+R + L     +      + 
Sbjct: 394 RQEREAAQTALNASREQADAIASASEAWVQHQNTLTRQIEARLQTLNPQRTEQAQLQERH 453

Query: 152 -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
              +  I    + L+     + S      +LE + + +   + +  + L   +   +   
Sbjct: 454 NQLSRQIDEQTQILERIAPELASKQTQAAELEGQLNAVSQQIQTLAQTLAANEQELQTQR 513

Query: 211 VSQNDLNQQERIVYKSTLEL 230
            +Q  L  ++R   +   +L
Sbjct: 514 QTQTRLLSEQRDKQRQLDKL 533


>gi|189464237|ref|ZP_03013022.1| hypothetical protein BACINT_00574 [Bacteroides intestinalis DSM
           17393]
 gi|189438027|gb|EDV07012.1| hypothetical protein BACINT_00574 [Bacteroides intestinalis DSM
           17393]
          Length = 366

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 90/293 (30%), Gaps = 55/293 (18%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E R+E L+    +      +++     ++ +   +   ++          E++  L    
Sbjct: 56  EPRDEILI--KPQISGIIDELYKEAGQTIRKGEVIAKVKVIPELGTLNSAESRVRLAELN 113

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               + D   ++ LFE   VS+ D  + E  V                            
Sbjct: 114 AKQGETDFARVEKLFEDKLVSREDYEKAEVSV---------------------------- 145

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
                   K+   +L+  +         +T    +     I S I G I+     + ++ 
Sbjct: 146 --------KQAREELQTAKDNLEIVKEGITKNSASFSSTLIRSTIDGLILDVPVKAGNSV 197

Query: 312 A-----QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      +  +   +     R K+   ++  V +G    +      ++    F AI
Sbjct: 198 IMSNTFNDGTTIATVANMND-LIFRGKIDETEVGRVHEGMPVKLTIGALQNL---SFDAI 253

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +E I P   +++   Q +   +  +++ D         +R+G+ A      + 
Sbjct: 254 LEYISPKGVEENGANQFEI--KAAIQVPDTVM------IRSGYSANAEIVLER 298



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 48/130 (36%), Gaps = 3/130 (2%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
            +  +E +  ++G++   D +  IK   SGII +   E G  I +G  +   + I     
Sbjct: 41  AVADLEKTTVATGKVEPRDEI-LIKPQISGIIDELYKEAGQTIRKGEVIAKVKVIPELGT 99

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           ++  +  ++     ++ ++   DF   +    +K     + +  +   K      +    
Sbjct: 100 LNSAESRVR--LAELNAKQGETDFARVEKLFEDKLVSREDYEKAEVSVKQAREELQTAKD 157

Query: 156 GISSVYRSLK 165
            +  V   + 
Sbjct: 158 NLEIVKEGIT 167


>gi|167816174|ref|ZP_02447854.1| HlyD family secretion protein [Burkholderia pseudomallei 91]
          Length = 356

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/198 (10%), Positives = 66/198 (33%), Gaps = 4/198 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  + ++ ++ ++G   W          +       + N + I    SG +
Sbjct: 10  ERKRPGKKPLVVLAIIVVLLLVGAFVW-WFATRNQVSTDDAY--TDGNAITIAPKVSGYV 66

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               +++   + +G  LL  +  +    +D  +  +   +  +D  +  LD  + ++   
Sbjct: 67  VALAIDDNVYVHRGDLLLVIDQRDYQAQVDAARAQLGLAQAQLDAAQVQLDIAHVQFPAQ 126

Query: 128 -EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             +A    E     F     +   +      ++  +++ +   +  +   N      ++ 
Sbjct: 127 YRQAQAQIEAAQASFRQALAAYERQHAVDARATSQQAIDVADAQRLTADANVATTRAQAR 186

Query: 187 LLRALLSSHQKDLTMMKN 204
               +    ++  T ++ 
Sbjct: 187 TASLVPQQIRQAQTAVEQ 204


>gi|5802957|gb|AAD51855.1|AF179308_1 KIF4 [Homo sapiens]
          Length = 1232

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 8/186 (4%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             + I+     ++K++ ++ +    + E+  L+    K D  +     R  + L  L   
Sbjct: 549 QLQPIQYQYQDNIKELELEVINLQKEKEELVLELQTAKKDANQAKLSERRRKRLQELEGQ 608

Query: 146 HSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENK-SSLLRALLSSHQKD 198
            +   K  N          S  R++      +R +   R+ L  +            QK 
Sbjct: 609 IADLKKKLNEQSKLLKLKESTERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKR 668

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +  L E++   Q +L + ER   K +  LR    E     + + +   +   E A+ 
Sbjct: 669 DKEVIQLKERDRKRQYELLKLERNFQKQSNVLRRKTEEAAAANKRLKDALQKQR-EVADK 727

Query: 259 LKEISR 264
            KE   
Sbjct: 728 RKETQS 733



 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 26/234 (11%), Positives = 87/234 (37%), Gaps = 14/234 (5%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            VE   ++ +G      +  +  + I L + + + +   ++  +       +   ++E  
Sbjct: 395 LVEENEKLSRGLSEAAGQTAQMLERIILTEQANEKMNAKLEELRQHAACKLDLQKLVETL 454

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN----RLDLENKSS 186
            +   ++ ++ +       +++ +  ++ +  ++   + +   +  +    R      + 
Sbjct: 455 EDQELKENVEIICNLQQLITQLSDETVACMAAAIDTAVEQEAQVETSPETSRSSDAFTTQ 514

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                    ++ + + K L  K A+++  + Q +  +     + ++NI E +  + ++ +
Sbjct: 515 HALRQAQMSKELVELNKALALKEALAR-KMTQNDSQLQPIQYQYQDNIKELELEVINLQK 573

Query: 247 LYDEANLEFANYLKEI---------SRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  LE     K+           + L++ +   AD   KL    K  + K 
Sbjct: 574 EKEELVLELQTAKKDANQAKLSERRRKRLQELEGQIADLKKKLNEQSKLLKLKE 627


>gi|30249105|ref|NP_841175.1| Type I antifreeze protein:HlyD family secretion protein
           [Nitrosomonas europaea ATCC 19718]
 gi|30138722|emb|CAD85027.1| Type I antifreeze protein:HlyD family secretion protein
           [Nitrosomonas europaea ATCC 19718]
          Length = 356

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/401 (10%), Positives = 113/401 (28%), Gaps = 78/401 (19%)

Query: 21  TLLSIIGIIGLITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            L +++ I  ++ W +L P       V+ +G I   +  ++I +   G I +     G  
Sbjct: 12  LLAALVIITIIVAWRVLRPAGLPAGIVAGNGRIEATE--IDIATRAPGRIIEILAREGDF 69

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +     L            D + +  + +       +                       
Sbjct: 70  VQADRVLARM---------DTQVLRAQQIEAEAQVRR----------------------- 97

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                       ++  +    S+    + + T  R++   R          +A L + +K
Sbjct: 98  ------------AEHAHQTAQSIVIQRQSEQTAARAVVAQR----------QAELDAARK 135

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   + L  + A +Q +L+  +  V  +   +     +       I     +       
Sbjct: 136 RLQRTQMLAGEGASAQQELDDDQARVLSAQAAVSAAQAQVAAANASIEAAKSQVI----- 190

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
                     ++Q       + +  L+   +   + +P  G + Y +             
Sbjct: 191 ----------ESQSVIVAAQATVARLQADIDDSELRAPRDGRVQY-RVAEPGEVLGVGGR 239

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ- 376
           ++ +V  S   Y+   +  +    V  G    +              + +  +     + 
Sbjct: 240 VLSMVDLSD-VYMTFFLPAEAAGKVALGSDIHIVLDAAPGYVIPAKASFVASVAQFTPKT 298

Query: 377 -QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +  + + +  + V  +I       +  +++ G P      
Sbjct: 299 VETESERLKLMFRVRARIDPELLKQHLEQVKTGLPGMAYVK 339


>gi|323966149|gb|EGB61586.1| HlyD family protein secretion protein [Escherichia coli M863]
 gi|327251121|gb|EGE62814.1| hlyD family secretion family protein [Escherichia coli STEC_7v]
          Length = 355

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/381 (11%), Positives = 111/381 (29%), Gaps = 75/381 (19%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            + L        S        + + S  +A + + + ++                     
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNI--------------------- 188

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                  ++ +  +   +   R I    D++ L+                          
Sbjct: 189 -------IQAQTRVEAAQATERRIAADIDDSELK-------------------------- 215

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                        +P  G + Y +             ++ +V  S   Y+   +  +Q  
Sbjct: 216 -------------APRDGRVQY-RVAEPGEVLAAGGRVLNMVDLSD-VYMTFFLPTEQAG 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAF 398
            +K G  A +      D+R     + +  +     +  + ++ + +  + V  +I     
Sbjct: 261 TLKLGGEARLILDAAPDLRIPASISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELL 320

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
             +   ++ G P         
Sbjct: 321 QQHLEYVKTGLPGVAWVRVNE 341


>gi|315126876|ref|YP_004068879.1| hypothetical protein PSM_A1804 [Pseudoalteromonas sp. SM9913]
 gi|315015390|gb|ADT68728.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 390

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 82/228 (35%), Gaps = 17/228 (7%)

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN---LFEKNAVSQNDLNQQE 220
           L   +  + S  L     + +S L R      +K L   +    L +   ++Q +LN  +
Sbjct: 75  LNDVIAMVESPELTNELKQQQSVLARLEGELQRKHLEARRQSLSLNKALDLAQVELNAAD 134

Query: 221 RIVYKSTLELRENIHEQKNMLRHINEL------YDEANLEFANYLKEISRDLEQNQRTFA 274
           R   ++TL +++N+  Q +  + I+EL      Y  A  E       ++ +L+  +R   
Sbjct: 135 RENRRATLSMQKNVISQIDHEKAIDELTRAKLSYKHAEQEVELSKDTLAFELQAAKRDVT 194

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
            +   +  L +     TI + ++G +            Q  QPLM +V          +V
Sbjct: 195 RQQLIVDDLLRKVNNLTIKATVSGIVGNLLVQQREAVTQS-QPLMTLV-DLSNFEAELQV 252

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  +  G    +           K    +  I P ++ ++   +
Sbjct: 253 PESYANDLGLGMDVEITMGA------SKVMGTLSAISPEVNNREVTTR 294


>gi|308050805|ref|YP_003914371.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
 gi|307632995|gb|ADN77297.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
          Length = 356

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/237 (10%), Positives = 84/237 (35%), Gaps = 13/237 (5%)

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             +K+ + G ++    +  +  +  ++    ++L  ++   R      +    +++ L  
Sbjct: 31  EQAKMASSGEAAQATEVTARRVQAETVMRE-VNLYGRTEPDRMTTLRAEVKGRVLEVLVP 89

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           + A     +   + ++     +L E +   ++ L+   ++  +A+ + A    +      
Sbjct: 90  RGA----RVTAGQPLLQLHQRDLPEQLARAQSELKQ-RQIDFDASNKLAKQGLQGRLRQA 144

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +       +++  LE      T+ +P  G +   +     +Y      +   V     
Sbjct: 145 EVETELVKARAEVKRLELDLAHTTVRAPFDG-VFNERMVEEGDYLAIGDRIGT-VADLDP 202

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
             + A++T   +  ++ G  A   F     I +      +  I  + ++  N  + +
Sbjct: 203 LVVNAEITEIDVVGLRVGQAANASF-----IGDAPVAGTVRYIASVSTEGTNTFRIE 254



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 4/94 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT----EKSALDFL 120
           G + +  V  G+++  G PLL     +  + +   +  +K  +   D      K  L   
Sbjct: 81  GRVLEVLVPRGARVTAGQPLLQLHQRDLPEQLARAQSELKQRQIDFDASNKLAKQGLQGR 140

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             + +V  +  ++R E     L   H+T    F+
Sbjct: 141 LRQAEVETELVKARAEVKRLELDLAHTTVRAPFD 174


>gi|322433028|ref|YP_004210277.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX9]
 gi|321165255|gb|ADW70959.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX9]
          Length = 442

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 8/129 (6%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED----- 89
           S    I + V + G +    N V I S  +G +       G  + +G PL+  +      
Sbjct: 95  SKTGNINVYVDALGTVTP-TNTVTIYSQITGKVMAVYYREGQIVRKGQPLIDIDPRPYEA 153

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
             T     L+          ID E+  + F  +K  +  +  E +++ +L   G   +  
Sbjct: 154 TLTQAEGTLQHDQGVLAEARIDLERYQIAF--SKNAIARQQLEDQQQVVLQDEGTVKTDE 211

Query: 150 SKVFNYGIS 158
             V    + 
Sbjct: 212 GTVAYDKVQ 220


>gi|296445674|ref|ZP_06887628.1| efflux transporter, RND family, MFP subunit [Methylosinus
           trichosporium OB3b]
 gi|296256777|gb|EFH03850.1| efflux transporter, RND family, MFP subunit [Methylosinus
           trichosporium OB3b]
          Length = 443

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 66/193 (34%), Gaps = 25/193 (12%)

Query: 7   KNLKRNHPASLKRM----TLLSIIGIIGLITWSILLP------------------IEISV 44
           ++  R  PA   R      L+  I  +  I W++                     IE +V
Sbjct: 24  RDRPRLAPAPSGRSAPRRLLIGAILAVLAIGWALKAKLSPQPDANLVTAPAVIGDIERTV 83

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            ++G +     +V + +  SG +   +V  G ++  G  +   + +   + +   + +++
Sbjct: 84  LATGTLKPV-KLVAVGAQMSGRVVSLKVALGQRVEAGELIAEIDSVTQRNALRTSEAALR 142

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
           + R   + ++++L      +   +     +     D+         +     I+ +   +
Sbjct: 143 STRAQREEKEASLMLAEANFTRQKATLAQKASSRADYDSA--EANVRTTRAQIAQLDAQI 200

Query: 165 KMKLTRMRSIYLN 177
                 + +  +N
Sbjct: 201 IEAEVAIEAARVN 213



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 46/165 (27%), Gaps = 4/165 (2%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             + A     + D    +N    +  +      Q      S +    N   QK  L    
Sbjct: 114 QRVEAGELIAEIDSVTQRNALRTSEAALRSTRAQREEKEASLMLAEANFTRQKATLAQKA 173

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
               + +   AN ++     + Q      +    +           I +PI G+++    
Sbjct: 174 SSRADYDSAEAN-VRTTRAQIAQLDAQIIEAEVAIEAARVNLGYTRITAPIDGSVLAI-V 231

Query: 306 FSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTA 348
                     Q    IV         IRA+++   +  VK G   
Sbjct: 232 TQEGQTVNAVQSAPTIVVLGQVDTMTIRAEISEADVVRVKPGQKV 276


>gi|171914180|ref|ZP_02929650.1| Chromosome segregation protein SMC [Verrucomicrobium spinosum DSM
           4136]
          Length = 1328

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 64/203 (31%), Gaps = 5/203 (2%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
               I+  +  ++ L   I   +       +  D  ++   + +EQ         S    
Sbjct: 300 AESKIEFNRERVEELEGRIRRNEEDATNNRDMVDRQQRELAAADEQFSSIRNAIESRQYA 359

Query: 152 VFNYGIS--SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +  + I+  ++    +      R++      LE +++   A   S    +   +   E  
Sbjct: 360 LEEHQITHNAIIPERQKLEMERRTLRETFRRLEGEAATADAKAQSLTNQMATDRQRHEAL 419

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE---ISRDL 266
           A  +    Q           L+  I E + +   +     E         ++    S +L
Sbjct: 420 AHDKQSAVQAREASQVEFDHLQRQIEELETVRAELEHKLKELTNTIQEQRRQRDAASEEL 479

Query: 267 EQNQRTFADEMSKLTILEKTREQ 289
              QR      S+L +L++  E+
Sbjct: 480 NNLQRQLTQRRSRLEVLQQILEK 502



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 72/208 (34%), Gaps = 11/208 (5%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E       ++  ++ LR  ++        +  K  ++E    + EEQ  +      +  S
Sbjct: 669 EEAASTLRRETELRELRVQVEALDIQ---VVEKEMLIEDLRMALEEQQREEANARDA--S 723

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++    +S     + +    ++        LE +   +   LS+ +  +   +   E N 
Sbjct: 724 QMNREALSQYQGKVSVVQRTLQQATAKLDSLEWEQGQIAQRLSAAEAQIQQHR---EANQ 780

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V+  ++ + +        ++   I  +      +NEL     LE  N L+ + R      
Sbjct: 781 VALYEIEETQERERALETQIESVIRREVESTERLNELKTALALE-QNALQNVERQKAPLA 839

Query: 271 RTFADEMSKLTILEKT--REQKTILSPI 296
               +  S ++  E      ++ I S +
Sbjct: 840 SRLEELESSISRYENECFIWRQRIDSAV 867


>gi|168217714|ref|ZP_02643339.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
 gi|182380239|gb|EDT77718.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
          Length = 376

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 51/133 (38%), Gaps = 1/133 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V  +G+I  E           G + K +VENG  + +G  L T+++ +    ++  ++ +
Sbjct: 48  VFVNGKIEPEKVENIFLDATKGTVDKVEVENGDVVEKGDTLFTYKNDQVQSQVEQLELQL 107

Query: 104 KNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            + +    +  K   +      D+ +   E++  Q         +   ++    +    +
Sbjct: 108 NSAKNQKEEINKQNAEAKKQLEDLKKAGLENQMPQGGQMPNLGQNAGGEISTGSVDEQIK 167

Query: 163 SLKMKLTRMRSIY 175
            L+ ++  ++   
Sbjct: 168 LLEKQIKALKDKE 180



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 65/213 (30%), Gaps = 28/213 (13%)

Query: 213 QNDLNQQERIVYKSTL---ELRENIHEQKNMLRHINELYDEANLEF--------ANYLKE 261
           Q+ + Q E  +  +     E+ +   E K  L  + +   E  +           N   E
Sbjct: 97  QSQVEQLELQLNSAKNQKEEINKQNAEAKKQLEDLKKAGLENQMPQGGQMPNLGQNAGGE 156

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           IS      Q      + K     K +E   + +PI G ++  +S +       +QP   I
Sbjct: 157 ISTGSVDEQIKL---LEKQIKALKDKEYYKVTAPIGGKVILAESST-----NPTQP--YI 206

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI-IEKID------PII 374
              S   YI   V  K    +K+G    +           K  ++    ID         
Sbjct: 207 TVESGDYYISGSVNEKDQPKIKEGQEVQITILSTNKNINGKISSVRNTPIDNGASLAAQT 266

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             Q        YYEV +         N   ++ 
Sbjct: 267 GAQGGAGGNMSYYEVKITPDSQEDLTNGFHVQA 299


>gi|197123996|ref|YP_002135947.1| efflux transporter RND family, MFP subunit [Anaeromyxobacter sp. K]
 gi|196173845|gb|ACG74818.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter sp.
           K]
          Length = 429

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 47/153 (30%), Gaps = 16/153 (10%)

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLMKIVPHS- 325
            + + A   + L        +  + SP+ G I+  +S         +   P++  V    
Sbjct: 188 AEASVAQSRATLQATLVDMGKAVVRSPVDGVIL-VRSIEPGQTVAATLEAPVLFTVAEDL 246

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           +   +R  V    +  VK G  A      + D       A +       S          
Sbjct: 247 RRMELRVDVDEADVGRVKAGQQARFTVDAFPDRTFAARVAQVRLGATTTSGVVT------ 300

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            Y+ +L +      ++++ L  G  A      +
Sbjct: 301 -YKAVLAVD-----NDDLALFPGMTAAAEIVVE 327



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 50/121 (41%), Gaps = 5/121 (4%)

Query: 16  SLKRMTLLSIIGIIGLITW----SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQ 71
           +L     L++ G  G + W    +    + ++VS++G +    N VE+ S  SG+++  +
Sbjct: 40  TLVLAVTLALRGRGGAVPWQTEPARRGALTVTVSATGTLEP-TNEVEVGSELSGVVRSVE 98

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
                +I +G  L   +  +        + ++      +   ++ ++      + LE+  
Sbjct: 99  ATYNQRIAKGQVLARIDTTKLEAQAAQYRAALAAAEAKVAEARATVEEDRLALERLERVR 158

Query: 132 E 132
           E
Sbjct: 159 E 159


>gi|134122722|dbj|BAF49658.1| myosin heavy chain [Saurida wanieso]
 gi|156229670|dbj|BAF75972.1| myosin heavy chain fast skeletal type 1 [Saurida wanieso]
          Length = 1936

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 78/199 (39%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L ++  KY    +++   G  
Sbjct: 1415 LEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQKYEEGQAEL--EGAQ 1472

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD   +   L+    + Q++++ +     ++  S ++L +
Sbjct: 1473 KEARSLSTELFKMKNSYEEALD---QLETLKRENKNLQQEISDLTEQIGESGKSIHELEK 1529

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      E+ R L +          
Sbjct: 1530 AKKTVETEKSEIQTALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQIKR 1589

Query: 278  --SKLTILEKTREQKTILS 294
               ++    ++     + S
Sbjct: 1590 NSQRVIDSMQSTLDSEVRS 1608



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 73/229 (31%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+Q  +   K 
Sbjct: 1207 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKSKGNLEKMCRTLEDQFSELKAKN 1264

Query: 146  HSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                 ++         + +       +L    ++       +   +     L  H ++  
Sbjct: 1265 DENVRQINDMSAQRARLQTENGEFTRQLEEKEALVSQLTRGKQAFTQQIEELKRHVEEEV 1324

Query: 201  MMKNLFEKNAVSQND----LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
              KN       S       L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1325 KAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVSQWRSKYETDAIQRT 1384

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1385 EELEEAKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLMI 1431



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 74/226 (32%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTFEDI--ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++  E+   ++ + I  K+     L   I+ E+S    L  K   L+   
Sbjct: 1057 EGDLKLAQESIMDLENEKQQSDEKIKKKEFETAQLLSKIEDEQSMGAQLQKKIKELQARI 1116

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1117 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1170

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1171 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1225

Query: 252  NLEFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +    +        +LE+  RT  D+ S+L        ++ 
Sbjct: 1226 KMEIDDLSSNMEAVAKSKGNLEKMCRTLEDQFSELKAKNDENVRQI 1271


>gi|110798901|ref|YP_696229.1| hypothetical protein CPF_1793 [Clostridium perfringens ATCC 13124]
 gi|110673548|gb|ABG82535.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
          Length = 376

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 51/133 (38%), Gaps = 1/133 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V  +G+I  E           G + K +VENG  + +G  L T+++ +    ++  ++ +
Sbjct: 48  VFVNGKIEPEKVENIFLDATKGTVDKVEVENGDVVEKGDTLFTYKNDQVQSQVEQLELQL 107

Query: 104 KNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            + +    +  K   +      D+ +   E++  Q         +   ++    +    +
Sbjct: 108 NSAKNQKEEINKQNAEAKKQLEDLKKAGLENQMPQGGQMPNLGQNAGGEISTGSVDEQIK 167

Query: 163 SLKMKLTRMRSIY 175
            L+ ++  ++   
Sbjct: 168 LLEKQIKALKDKE 180



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 65/213 (30%), Gaps = 28/213 (13%)

Query: 213 QNDLNQQERIVYKSTL---ELRENIHEQKNMLRHINELYDEANLEF--------ANYLKE 261
           Q+ + Q E  +  +     E+ +   E K  L  + +   E  +           N   E
Sbjct: 97  QSQVEQLELQLNSAKNQKEEINKQNAEAKKQLEDLKKAGLENQMPQGGQMPNLGQNAGGE 156

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           IS      Q      + K     K +E   + +PI G ++  +S +       +QP   I
Sbjct: 157 ISTGSVDEQIKL---LEKQIKALKDKEYYKVTAPIGGKVILAESST-----NPTQP--YI 206

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI-IEKID------PII 374
              S   YI   V  K    +K+G    +           K  ++    ID         
Sbjct: 207 TVESGDYYISGSVNEKDQPKIKEGQEVQITILSTNKNINGKISSVGNTPIDNGASLAAQT 266

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
             Q        YYEV +         N   ++ 
Sbjct: 267 GAQGGASGNMSYYEVKITPDSQEDLTNGFHVQA 299


>gi|18543225|ref|NP_569910.1| CG11448 [Drosophila melanogaster]
 gi|74893562|sp|O76878|RIPL_DROME RecName: Full=RILP-like protein homolog
 gi|3219569|emb|CAA19654.1| EG:132E8.4 [Drosophila melanogaster]
 gi|7290155|gb|AAF45619.1| CG11448 [Drosophila melanogaster]
 gi|16648230|gb|AAL25380.1| GH23825p [Drosophila melanogaster]
 gi|220947180|gb|ACL86133.1| CG11448-PA [synthetic construct]
 gi|220956706|gb|ACL90896.1| CG11448-PA [synthetic construct]
          Length = 443

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 73/210 (34%), Gaps = 7/210 (3%)

Query: 86  TFEDIETTDLIDLKK-VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           T E +E     + ++  +I+ LR  +   +S            +K  E  EEQ      +
Sbjct: 58  TLELLEALATKNERENATIQELRDKVAQLESEKLEKAEFRRRFDKELELIEEQWRSETNE 117

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                S + +     V ++  ++ +  +S  L     E+  S+    L S   D  +++ 
Sbjct: 118 LVDLVSSLQDENKRLVKQTQDLQSSSAQSSGLGASLTESIISMTNHELHSALSDTQVLQR 177

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------Y 258
           L E+    +++L  +ER +     EL     + + +     +      L  A        
Sbjct: 178 LKEQIYKQRDELKHRERELQDKYSELEHLNIQAERLKASERDTRRRHKLMQAQVKTLCEE 237

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             +    L+   R       +L + EK  E
Sbjct: 238 RADFLAQLQDQSREINQLRKRLGLAEKENE 267


>gi|332186107|ref|ZP_08387853.1| hlyD secretion family protein [Sphingomonas sp. S17]
 gi|332013922|gb|EGI55981.1| hlyD secretion family protein [Sphingomonas sp. S17]
          Length = 389

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 67/221 (30%), Gaps = 20/221 (9%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  +   Q +              + G++S    L   +   R+ +             +
Sbjct: 76  AIHADNTQTVKAGAPLLDLDPATADVGLASAAAQLAQAVRSTRADFTKVNQSGAAIVQAQ 135

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           A L+  Q D    +    + AVS  +L+     V  +T  L     +       +     
Sbjct: 136 AELARAQSDYARRRGAAAEGAVSGEELSHAADAVKVATANLNLARAQAAQARTAVQGTQ- 194

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSS 309
                              N       ++       TR    I++PI G +V  ++    
Sbjct: 195 -----------------VGNNPAVMAAIAAYRRAAITRNHMHIIAPIDG-VVAQRTVQVG 236

Query: 310 NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
                  PLM +VP     ++ A     Q++ ++ G  AT+
Sbjct: 237 QQVAAGTPLMAVVPLD-RLWVDANFRETQLKDIRIGQPATI 276


>gi|325108902|ref|YP_004269970.1| Forkhead-associated protein [Planctomyces brasiliensis DSM 5305]
 gi|324969170|gb|ADY59948.1| Forkhead-associated protein [Planctomyces brasiliensis DSM 5305]
          Length = 1144

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 2/196 (1%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              I  ++  ++  R  +++E+ AL     K+  +++ +  R         +  S     
Sbjct: 235 RAAISAERAKLQAERKRLESERDALTGQFEKWLRIKRKWNQR-WTGQRTSVQSESDRLDK 293

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            N  + +   +L  +   + +    R    ++   L       +K L   ++  +   + 
Sbjct: 294 LNDELQAKADALVKQERELTTAAAEREQTRSRIQELTDRAGELEKLLANAESAEKSTEIR 353

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            ++L  Q R   +      E   + + +   +  L  + N E      E+ + LE+   T
Sbjct: 354 LHELEDQLRRAAEGDALAAELESQCETLNDRVQHLESQLN-ETEQLRDELRQKLEERDET 412

Query: 273 FADEMSKLTILEKTRE 288
            A + S L  LE T E
Sbjct: 413 LAAKNSALEDLETTAE 428



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 16/214 (7%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH--ST 148
           E   L    +   + L   +   +S L+      D L +  E R+E L           T
Sbjct: 366 EGDALAAELESQCETLNDRVQHLESQLNETEQLRDELRQKLEERDETLAAKNSALEDLET 425

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++     ++   + L  +   +        +L +      A   +  +    +    E+
Sbjct: 426 TAESLRSELAECQQQLTSRNEELEQRNEQLTELRSVLEEAEADKQALSEHCQKL----EE 481

Query: 209 NAVSQNDLNQQERIVY--------KSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            AVS+ND  Q E               L+LRE + EQ+      +E       E      
Sbjct: 482 RAVSENDQRQAELDAEWTRMSEERDRLLDLREQLAEQRAAFTQAHEDLRSVRSELEVEKG 541

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                  Q + T     S++         + I++
Sbjct: 542 RFLEQ--QEEWTAESLRSQIVAERPIEPTEEIVA 573



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 64/206 (31%), Gaps = 7/206 (3%)

Query: 88  EDIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           ++++     +  ++  +       +  +S +  L ++   LEK   + E        + H
Sbjct: 296 DELQAKADALVKQERELTTAAAEREQTRSRIQELTDRAGELEKLLANAESAEKSTEIRLH 355

Query: 147 STCSKVFNYGI-----SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
               ++          + +    +    R++ +     + E     LR  L    + L  
Sbjct: 356 ELEDQLRRAAEGDALAAELESQCETLNDRVQHLESQLNETEQLRDELRQKLEERDETLAA 415

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             +  E    +  +  + E    +  L  R    EQ+N          E        L E
Sbjct: 416 KNSALED-LETTAESLRSELAECQQQLTSRNEELEQRNEQLTELRSVLEEAEADKQALSE 474

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTR 287
             + LE+   +  D+       E TR
Sbjct: 475 HCQKLEERAVSENDQRQAELDAEWTR 500


>gi|299133745|ref|ZP_07026939.1| efflux transporter, RND family, MFP subunit [Afipia sp. 1NLS2]
 gi|298591581|gb|EFI51782.1| efflux transporter, RND family, MFP subunit [Afipia sp. 1NLS2]
          Length = 401

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 53/133 (39%), Gaps = 4/133 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG     + V  I++  +G +   + ++G+ +  G  L T +  +   + +  +  +++ 
Sbjct: 69  SGRFDAVEQVQ-IRARVTGFVTGVEFKDGAIVKAGDLLYTIDPRQYQAVAEQAQGQLQDA 127

Query: 107 RCHIDTEKSALDFLNN---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           + H++  K  L+  ++      V +   + R +QL             +    +   +  
Sbjct: 128 KAHVELAKRELERASSLIKTDAVSQSVVDQRTQQLQTAEASALQAEGALKRAQLDVEFSQ 187

Query: 164 LKMKLTRMRSIYL 176
           ++  +T   S +L
Sbjct: 188 VRAPITGRISRHL 200



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 38/115 (33%), Gaps = 7/115 (6%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQRTFA 274
            Q + +  ++  +L++     +   R +         +    + + + ++ L+  + +  
Sbjct: 111 RQYQAVAEQAQGQLQDAKAHVELAKRELERASSLIKTDAVSQSVVDQRTQQLQTAEASAL 170

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ---QSQPLMK-IVPHS 325
                L   +   E   + +PI G I      +  N  Q       L+  IV   
Sbjct: 171 QAEGALKRAQLDVEFSQVRAPITGRISR-HLVTVGNLVQGSESGATLLTSIVSMD 224


>gi|257464416|ref|ZP_05628790.1| periplasmic component of efflux system [Fusobacterium sp. D12]
          Length = 219

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 10/132 (7%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLI---DLKKVSIKNLRCHIDTEKS----ALDF 119
           +K+  V+ G  + +G  L+TF+D+    L+   + +K+ ++ LR +   E S        
Sbjct: 70  VKEIFVKEGDYVEKGQVLMTFDDLSKNKLLRSMEKEKLQLQKLRRNYQIESSLEKIGGAS 129

Query: 120 LNNKYDVLE--KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           LN+  D+ E  +  E   E+L +   K  S      N  ISS+       L    S  L 
Sbjct: 130 LNSLKDMREEIRLHELSLEELNEDFRKTASEILSPANGTISSLTAQEN-YLVNTDSPLLK 188

Query: 178 RLDLENKSSLLR 189
             DL N   +L 
Sbjct: 189 IADLSNIKIVLE 200


>gi|256424311|ref|YP_003124964.1| secretion protein HlyD family protein [Chitinophaga pinensis DSM
           2588]
 gi|256039219|gb|ACU62763.1| secretion protein HlyD family protein [Chitinophaga pinensis DSM
           2588]
          Length = 347

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 80/254 (31%), Gaps = 17/254 (6%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
           E N + + S   G I  F +++   +  G  LLT +D E    +   +  +   +  +  
Sbjct: 48  ESNAIPVVSRVGGYIDTFALQDYQSVKGGQLLLTIDDKEYKIAVQQAEADLSAAKADLIF 107

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS-----KVFNYGISSVYRSLKMK 167
            ++ +  + +  +V +      +  L           +      +  + + +   + K+ 
Sbjct: 108 AEAQITNIGSDKNVADAGVSVEQVNLEKATRDLARDQALFNDGSITQHQLDNSQSAYKVA 167

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           L+++ S       +  +     A +   + ++ + +   E          + +    +  
Sbjct: 168 LSQLESSRKRVSQVVTQHGTANAQIEKAKANVALKEAALES--------AKLKLSYTQVI 219

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             +   I +       + +   +      N    I  + ++ Q         + +     
Sbjct: 220 APVAGRIGKTNLQKGQLVQAGQQLFSVVNNERYWIVANFKETQLEKMKIGQVVKVEVDGY 279

Query: 288 EQKTILSPIAGTIV 301
             K I    +G IV
Sbjct: 280 PDKEI----SGKIV 289


>gi|157150604|ref|YP_001450049.1| RND family efflux transporter MFP subunit [Streptococcus gordonii
           str. Challis substr. CH1]
 gi|157075398|gb|ABV10081.1| efflux transporter, RND family, MFP subunit subfamily
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 394

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 77/213 (36%), Gaps = 9/213 (4%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND-LNQ 218
           +   +     +       + DLE     +   ++  Q  +       + N  S    LN+
Sbjct: 59  LSGQVSANNEQYIYYDSTKGDLEGVLVNVGDQVTVGQALVQYRNTEAQSNYDSAVRALNK 118

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +R +Y    EL+ N            E   E+     N  + +   L+  Q   AD   
Sbjct: 119 IDRQIY----ELQNNGTAPTPSPTAEGEESGESTAPAVNTQQSLDSQLKDLQDNRADAAD 174

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
           K+   +   +  T+LS + GT+V      S +    +Q L+ IV ++    ++ +++   
Sbjct: 175 KVNSSKLLLDATTVLSTVEGTVVEVNRDVSKSTTGSNQTLVHIV-NNGNLQVKGELSEYN 233

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           + ++  G   ++    Y D   K +   I  I 
Sbjct: 234 LANLSVGQEVSITSKVYPD---KTWTGKISYIS 263


>gi|149927995|ref|ZP_01916244.1| secretion protein HlyD [Limnobacter sp. MED105]
 gi|149823291|gb|EDM82525.1| secretion protein HlyD [Limnobacter sp. MED105]
          Length = 369

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 61/196 (31%), Gaps = 24/196 (12%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHIN------ELYDEANLEFANYLKEISRDLEQNQRTF 273
           ++ V     + +  + E + +               +A    A    ++    +  Q   
Sbjct: 107 QQTVNADLAQAKAGVAEAQALFEQAKLNADMIRNITDAGAVSAQERNQVIAAEKSAQARL 166

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +  T  E      T+ + +   ++  ++ +  +     Q L ++V   +    +A+
Sbjct: 167 LSARALQTQQEIRLRNTTVTA-LDDGVISARTATLGSVPAPGQELFRLV-RQQRLEWQAE 224

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           VT  ++  + +G    V         ++     +  + P+I+ Q           V + I
Sbjct: 225 VTDAELARISEGMAVNV------FNNDQALSGKVRTLSPVINAQSRTGM------VYVDI 272

Query: 394 TDLAFSDNNIELRNGF 409
                      L+ G 
Sbjct: 273 PGAYAKG----LKPGM 284



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/143 (11%), Positives = 52/143 (36%), Gaps = 6/143 (4%)

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
                I   + E G  + +G  L  F+       +   K  +   +   +  K   D + 
Sbjct: 80  LNGVRIDSLRAEVGDVVKKGQTLALFDQQTVNADLAQAKAGVAEAQALFEQAKLNADMIR 139

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           N  D    + + R +     +    S  +++ +       + ++++ T + ++    +  
Sbjct: 140 NITDAGAVSAQERNQ----VIAAEKSAQARLLSARALQTQQEIRLRNTTVTALDDGVIS- 194

Query: 182 ENKSSLLRALLSSHQKDLTMMKN 204
             +++ L ++ +  Q+   +++ 
Sbjct: 195 -ARTATLGSVPAPGQELFRLVRQ 216


>gi|121727703|ref|ZP_01680798.1| HlyD family secretion protein [Vibrio cholerae V52]
 gi|121630000|gb|EAX62408.1| HlyD family secretion protein [Vibrio cholerae V52]
          Length = 339

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 55/167 (32%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L + +  +    ++  ++ +KN        K+  +     
Sbjct: 52  SGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAI 111

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       G+ S          +   + +   
Sbjct: 112 SKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQVQANQVIMILQ 171

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +    +          +   + + E +A+     + + R     
Sbjct: 172 DLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQ 218



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 68/212 (32%), Gaps = 39/212 (18%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + +    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 65  QVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYD 124

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I +P  G I      + +   Q +Q +M I+       +  ++
Sbjct: 125 LAKNRVEEAKRKLEYTQITAPFDGVISEKTIENFAQV-QANQVIM-ILQDLNDLEVAIEI 182

Query: 335 T----------PKQIQHVK--KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                       + I  +         ++   Y                   +Q  ++ Q
Sbjct: 183 PHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTY------------------STQPSSDSQ 224

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           T   Y V+L   DL        +  G  A+V+
Sbjct: 225 T---YSVVLGFEDL----KGFRVMPGMSAKVI 249


>gi|114326446|ref|NP_071855.2| myosin-9 isoform 1 [Mus musculus]
 gi|205371802|sp|Q8VDD5|MYH9_MOUSE RecName: Full=Myosin-9; AltName: Full=Cellular myosin heavy chain,
            type A; AltName: Full=Myosin heavy chain 9; AltName:
            Full=Myosin heavy chain, non-muscle IIa; AltName:
            Full=Non-muscle myosin heavy chain A; Short=NMMHC-A;
            AltName: Full=Non-muscle myosin heavy chain IIa;
            Short=NMMHC II-a; Short=NMMHC-IIA
 gi|74180962|dbj|BAE27761.1| unnamed protein product [Mus musculus]
 gi|74180967|dbj|BAE27763.1| unnamed protein product [Mus musculus]
 gi|74180971|dbj|BAE27765.1| unnamed protein product [Mus musculus]
 gi|74180973|dbj|BAE27766.1| unnamed protein product [Mus musculus]
 gi|74180975|dbj|BAE27767.1| unnamed protein product [Mus musculus]
 gi|74180985|dbj|BAE27772.1| unnamed protein product [Mus musculus]
 gi|74180987|dbj|BAE27773.1| unnamed protein product [Mus musculus]
 gi|74180995|dbj|BAE27776.1| unnamed protein product [Mus musculus]
 gi|74180997|dbj|BAE27777.1| unnamed protein product [Mus musculus]
 gi|74180999|dbj|BAE27778.1| unnamed protein product [Mus musculus]
 gi|74181014|dbj|BAE27783.1| unnamed protein product [Mus musculus]
 gi|74181018|dbj|BAE27785.1| unnamed protein product [Mus musculus]
 gi|74181123|dbj|BAE27829.1| unnamed protein product [Mus musculus]
 gi|74184545|dbj|BAE27894.1| unnamed protein product [Mus musculus]
 gi|74184580|dbj|BAE27906.1| unnamed protein product [Mus musculus]
 gi|123233477|emb|CAM23428.1| myosin, heavy polypeptide 9, non-muscle [Mus musculus]
 gi|148697703|gb|EDL29650.1| myosin, heavy polypeptide 9, non-muscle [Mus musculus]
          Length = 1960

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 68/209 (32%), Gaps = 5/209 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +D   +   +      K     + + ++ +  L  +    E+A    +++  +   + 
Sbjct: 1653 ELDDTRASR--EEILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEI 1710

Query: 146  HSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             ++  K  +       +   +      +     N   + ++       +     DL + +
Sbjct: 1711 ANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLER 1770

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEI 262
            +  +KN  ++  L +Q + +     E+   +  + K  +  +     +   +  N  KE 
Sbjct: 1771 SHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAALEAKIAQLEEQLDNETKER 1830

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +Q +RT       L  +E  R    
Sbjct: 1831 QAASKQVRRTEKKLKDVLLQVEDERRNAE 1859



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 68/199 (34%), Gaps = 5/199 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ ++  ++  N K    +K  E R  +    L +     SK
Sbjct: 958  ARQKLQLEKVTTEAKLKKLEEDQIIMEDQNCKLAKEKKLLEDRVAEFTTNLME-EEEKSK 1016

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +     +     R+R     R +LE     L    +     +     L  + A 
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIA---ELQAQIAE 1073

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +  L ++E  +  +   + E   ++   L+ I EL  +   E    L+       + ++
Sbjct: 1074 LKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELETQI-SELQEDLESERASRNKAEK 1132

Query: 272  TFADEMSKLTILEKTREQK 290
               D   +L  L+   E  
Sbjct: 1133 QKRDLGEELEALKTELEDT 1151



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 72/225 (32%), Gaps = 37/225 (16%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
               + LR  +  +K  L+ + +  +   +  E R + L     K      ++        
Sbjct: 897  AEAEELRARLTAKKQELEEICHDLEARVEEEEERCQYLQAEKKKMQQNIQELEEQLEEEE 956

Query: 161  YRSLKMKLT----------------------------------RMRSIYLNRLDLENKSS 186
                K++L                                   R+     N ++ E KS 
Sbjct: 957  SARQKLQLEKVTTEAKLKKLEEDQIIMEDQNCKLAKEKKLLEDRVAEFTTNLMEEEEKSK 1016

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L  L + H+  +T ++    +    + +L +  R +   + +L + I E +  +  +  
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKM 1076

Query: 247  LYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTRE 288
               +   E    L  +  +  Q     +   +  ++++ L++  E
Sbjct: 1077 QLAKKEEELQAALARVEEEAAQKNMALKKIRELETQISELQEDLE 1121



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 80/237 (33%), Gaps = 16/237 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             +     +   L+        +L D +K     +      E   L  L    D   K  E
Sbjct: 1576 RDEQSEEKKKQLVRQVREMEAELEDERKQRSMAMAARKKLEMD-LKDLEAHIDTANKNRE 1634

Query: 133  SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               +QL     +      ++ +       +    K    +++S+    + L+ + +    
Sbjct: 1635 EAIKQLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMIQLQEELAAAER 1694

Query: 191  LLSSHQKDLTMMKNLFE----KNAVSQNDLNQQERIVYKSTLELRENIH-------EQKN 239
                 Q++   + +       K A++  +  + E  + +   EL E            K 
Sbjct: 1695 AKRQAQQERDELADEIANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKK 1754

Query: 240  MLRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                I+++  + NLE ++  K     + LE+  +    ++ ++    K++ + +I +
Sbjct: 1755 ANLQIDQINTDLNLERSHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAA 1811



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 72/190 (37%), Gaps = 8/190 (4%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            S+  L       +  ++ +  + + LE   ++ E+  L       +  ++          
Sbjct: 1519 SVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDE 1578

Query: 162  RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +S + K   +R +     +LE++       +++ +K    +K+L       +  ++   +
Sbjct: 1579 QSEEKKKQLVRQVREMEAELEDERKQRSMAMAARKKLEMDLKDL-------EAHIDTANK 1631

Query: 222  IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               ++  +LR+   + K+ +R +++    +  E     KE  + L+  +        +L 
Sbjct: 1632 NREEAIKQLRKLQAQMKDCMRELDDTRA-SREEILAQAKENEKKLKSMEAEMIQLQEELA 1690

Query: 282  ILEKTREQKT 291
              E+ + Q  
Sbjct: 1691 AAERAKRQAQ 1700



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 17/218 (7%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             D+E     + ++            +         + +   +     E+   +   K   
Sbjct: 918  HDLEARVEEEEERCQYLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLE 977

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                +       + +  K+   R+     N ++ E KS  L  L + H+  +T ++    
Sbjct: 978  EDQIIMEDQNCKLAKEKKLLEDRVAEFTTNLMEEEEKSKSLAKLKNKHEAMITDLEERLR 1037

Query: 208  KNAVSQNDLNQQER-------IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY-- 258
            +    + +L +  R        +     EL+  I E K  L    E    A         
Sbjct: 1038 REEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAA 1097

Query: 259  --------LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                    ++E+   + + Q     E +     EK + 
Sbjct: 1098 QKNMALKKIRELETQISELQEDLESERASRNKAEKQKR 1135



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 75/210 (35%), Gaps = 12/210 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +  D  +   +       +   AL+    +   LE+  +    ++ D +         V
Sbjct: 1461 AEERDRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSV 1520

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                    ++ + ++   T++  +       E+    L   L + +      ++L  ++ 
Sbjct: 1521 HELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFE--RDLQGRDE 1578

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY-----DEANLEFANY-LKEISR 264
             S+    Q  R V +   EL +   ++   +    +L       EA+++ AN   +E  +
Sbjct: 1579 QSEEKKKQLVRQVREMEAELEDERKQRSMAMAARKKLEMDLKDLEAHIDTANKNREEAIK 1638

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILS 294
             L + Q    D M +L   +    ++ IL+
Sbjct: 1639 QLRKLQAQMKDCMRELD--DTRASREEILA 1666



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 70/216 (32%), Gaps = 17/216 (7%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKY--------DVLEKAFESREEQLLDF-LGK 144
                 K       +  ++   + L+    +         D L+KA    ++   D  L +
Sbjct: 1711 ANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLER 1770

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSI-----YLNRLDLENKSSLLRALLSSHQKDL 199
             H+  ++     +    + LK KL  M S        +   LE K + L   L +  K+ 
Sbjct: 1771 SHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAALEAKIAQLEEQLDNETKER 1830

Query: 200  TMMKNLFEKNAVSQNDLN---QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                    +      D+    + ER   +   +  +    +   L+   E  +E      
Sbjct: 1831 QAASKQVRRTEKKLKDVLLQVEDERRNAEQFKDQADKASTRLKQLKRQLEEAEEEAQRAN 1890

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               +++ R+LE    T      +++ L+    +  +
Sbjct: 1891 ASRRKLQRELEDATETADAMNREVSSLKNKLRRGDL 1926


>gi|6320562|ref|NP_010643.1| Spc110p [Saccharomyces cerevisiae S288c]
 gi|417392|sp|P32380|NUF1_YEAST RecName: Full=Protein NUF1; AltName: Full=Spindle poly body spacer
           protein SPC110
 gi|4070|emb|CAA77668.1| nuf1 [Saccharomyces cerevisiae]
 gi|312175|emb|CAA51733.1| SPC110/NUF1 [Saccharomyces cerevisiae]
 gi|849173|gb|AAB64791.1| Nuf1p: Probable essential component of the nucleoskeleton (Swiss
           Prot. accession number P32380) [Saccharomyces
           cerevisiae]
 gi|207346403|gb|EDZ72910.1| YDR356Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|285811371|tpg|DAA12195.1| TPA: Spc110p [Saccharomyces cerevisiae S288c]
          Length = 944

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 73/204 (35%), Gaps = 21/204 (10%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +  +  +  +  L   + T K  +  L N  DV      S+E++L + + + +   S   
Sbjct: 227 EEREQMERKLAELERKLKTVKDQVLELENNSDVQSLKLRSKEDELKNLMNELNELKSNAE 286

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     L+ K   +R       +L+ KS  +   L   Q +   +K+         
Sbjct: 287 EKDT-----QLEFKKNELRKRTNELNELKIKSDEMDLQLKQKQNESKRLKD--------- 332

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------YLKEISRDLE 267
            +LN+ E    ++  +     +E K +   I EL +E + + +        L  +   L 
Sbjct: 333 -ELNELETKFSENGSQSSAKENELKMLKNKIAELEEEISTKNSQLIAKEGKLASLMAQLT 391

Query: 268 QNQRTFADEMSKLTILEKTREQKT 291
           Q +       S+L   E+  ++  
Sbjct: 392 QLESKLNQRDSQLGSREEELKKTN 415



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 82/198 (41%), Gaps = 7/198 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           + I   K  IK LR   +   +  D L  + D L+   ++ E++L       +S      
Sbjct: 163 NEIKSLKHEIKELRKEKNDTLNNYDTLEEETDDLKNRLQALEKELDAKNKIVNSRKVDDH 222

Query: 154 N---YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +        + R L     +++++    L+LEN S +    L S + +L   KNL  +  
Sbjct: 223 SGCIEEREQMERKLAELERKLKTVKDQVLELENNSDVQSLKLRSKEDEL---KNLMNELN 279

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +++  +++  +     ELR+  +E   +    +E+  +   +  N  K +  +L + +
Sbjct: 280 ELKSNAEEKDTQLEFKKNELRKRTNELNELKIKSDEMDLQLKQK-QNESKRLKDELNELE 338

Query: 271 RTFADEMSKLTILEKTRE 288
             F++  S+ +  E   +
Sbjct: 339 TKFSENGSQSSAKENELK 356


>gi|310766576|gb|ADP11526.1| Secretion protein HlyD [Erwinia sp. Ejp617]
          Length = 410

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 59/165 (35%), Gaps = 4/165 (2%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           L  + + +++ G +     V  + S  SG +     + G +++ G  L   +       +
Sbjct: 72  LADVPVYLTALGAVTPNGTV-TVTSQVSGTLTHVYFKEGEKVVAGQLLAQIDPRSYQATL 130

Query: 97  DLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              +  +   +  + + +  L     L  +  +  +  E++   +  +LG   +  +++ 
Sbjct: 131 AQYQGELSQNQALLKSARLTLARYQKLYAQDLLARQDLETQTATVGQYLGTVEAAQAQIA 190

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
              ++  +  +   ++    + L       +SS    ++   Q  
Sbjct: 191 AAKLNIEFARITAPISGRVGLRLVDAGNRIQSSDTTGIVVITQTQ 235


>gi|292627883|ref|XP_002666778.1| PREDICTED: myosin-6-like [Danio rerio]
          Length = 1940

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 75/214 (35%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   LR  +D   S ++ +      LEK   + E+Q+ ++  KY
Sbjct: 1210 QIDNLQRVKQKLEKEKS--ELRLELDDVVSNMEQIVKAKANLEKMCRTLEDQMSEYRTKY 1267

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                + R L+ K + +  +   +     +   LR  L    
Sbjct: 1268 EEAQRSINDFTMQKAKLQTENGELSRQLEEKDSLVSQLTRGKQSYTQQIEDLRRQLEEEV 1327

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +        L +Q     ++  EL+ ++ +  + +      Y+   ++  
Sbjct: 1328 KAKNALAHAVQSARHDAELLREQYEEEQEAKAELQRSLSKANSEVAQWRTKYETDAIQRT 1387

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L++  + L Q  +   + +  +     + E+ 
Sbjct: 1388 EELEDAKKKLAQRLQDAEEAVEAVNAKCSSLEKT 1421



 Score = 43.5 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 75/189 (39%), Gaps = 5/189 (2%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
              ++L   +   K++ +   +  + +++  ++ +E++ D   +   +   +  + +  + 
Sbjct: 1477 EARSLSTELFKLKNSYEESLDHLESMKRENKNLQEEIADLTEQIGESGKNI--HELEKIR 1534

Query: 162  RSLKMKLTRMR-SIYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            + L+ +   ++ ++      LE  +  +LRA L  +Q    + + L EK+   +     Q
Sbjct: 1535 KQLEQEKAEIQTALEEAEGSLEHEEGKILRAQLEFNQVKADIERKLSEKDEEMEQAKRNQ 1594

Query: 220  ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            +R++      L      +   LR   ++  + N E    L + +R   + Q+        
Sbjct: 1595 QRMIDTLQSSLESETRSRNEALRLKKKMEGDLN-EMEIQLSQANRQASEAQKQLKGLHGH 1653

Query: 280  LTILEKTRE 288
            L   +   +
Sbjct: 1654 LKDAQLQLD 1662



 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 68/217 (31%), Gaps = 20/217 (9%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            +        + +++     ++ E     ++ L+F   K D+  K  E  EE  ++   + 
Sbjct: 1536 QLEQEKAEIQTALEEAEGSLEHEEGKILRAQLEFNQVKADIERKLSEKDEE--MEQAKRN 1593

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                       + S  RS    L   + +  +  ++E + S      S  QK L  +   
Sbjct: 1594 QQRMIDTLQSSLESETRSRNEALRLKKKMEGDLNEMEIQLSQANRQASEAQKQLKGLHGH 1653

Query: 206  FEKNAVSQNDLNQ-----------QERIVYKSTLELRENIH--EQKNMLRHINELYDEAN 252
             +   +  +D  +            ER       EL E     EQ    R + E      
Sbjct: 1654 LKDAQLQLDDALRGNDDLKENIAIVERRNNLLQAELDELRSLVEQTERGRKLAEQELMDV 1713

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E    L   +  L   ++    + ++L    +   Q
Sbjct: 1714 SERVQLLHSQNTSLLNQKKKLEGDNTQLQTEVEEAVQ 1750


>gi|229527962|ref|ZP_04417353.1| multidrug resistance efflux pump [Vibrio cholerae 12129(1)]
 gi|229334324|gb|EEN99809.1| multidrug resistance efflux pump [Vibrio cholerae 12129(1)]
          Length = 376

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 69/204 (33%), Gaps = 9/204 (4%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E     L    +  +    ++K + E++  +Q + ++ +R   +      + +   +   
Sbjct: 112 EASQGALGLESTLKEAQAAVLKAIAERDK-AQREYDRYQRGYQRGAF-TEQQMDTTRQAY 169

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           +      + A  +       +  ++     T A  +++L   E   EQ  + +P  G + 
Sbjct: 170 KAAQAALEVAQSKQEQAQIALDSEVGGENTTVAQLLAELRKAEFDLEQTIVRAPTDGYVT 229

Query: 302 YNQSFSSS--NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
                     +      P+M  V   +  Y  A      +Q ++ G+ A   F       
Sbjct: 230 QLALR-PGMMSVPLPLAPVMTFVHTEEKIYTAA-FRQNSLQRLQPGFAAEFMFRALP--- 284

Query: 360 EKKFKAIIEKIDPIISQQDNNLQT 383
            K FK  + ++ P I +     + 
Sbjct: 285 GKVFKGEVIEVLPAIGESQIQARG 308



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 48/147 (32%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G + +  V+    + QG  L   + I     +   K  +K        L   +   ++A+
Sbjct: 72  GRVVEVPVKPNQPLKQGDVLFRIDPIPFEADVARLKAKVKEASQGALGLESTLKEAQAAV 131

Query: 118 DFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                + D  ++ ++  +   Q   F  +   T  + +    +++  +   +     ++ 
Sbjct: 132 LKAIAERDKAQREYDRYQRGYQRGAFTEQQMDTTRQAYKAAQAALEVAQSKQEQAQIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                     + L A L   + DL   
Sbjct: 192 SEVGGENTTVAQLLAELRKAEFDLEQT 218


>gi|189536981|ref|XP_001923213.1| PREDICTED: myosin-6-like isoform 1 [Danio rerio]
          Length = 1940

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 75/214 (35%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   LR  +D   S ++ +      LEK   + E+Q+ ++  KY
Sbjct: 1210 QIDNLQRVKQKLEKEKS--ELRLELDDVVSNMEQIVKAKANLEKMCRTLEDQMSEYRTKY 1267

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                + R L+ K + +  +   +     +   LR  L    
Sbjct: 1268 EEAQRSINDFTMQKAKLQTENGELSRQLEEKDSLVSQLTRGKQSYTQQIEDLRRQLEEEV 1327

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +        L +Q     ++  EL+ ++ +  + +      Y+   ++  
Sbjct: 1328 KAKNALAHAVQSARHDAELLREQYEEEQEAKAELQRSLSKANSEVAQWRTKYETDAIQRT 1387

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L++  + L Q  +   + +  +     + E+ 
Sbjct: 1388 EELEDAKKKLAQRLQDAEEAVEAVNAKCSSLEKT 1421



 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 75/189 (39%), Gaps = 5/189 (2%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
              ++L   +   K++ +   +  + +++  ++ +E++ D   +   +   +  + +  + 
Sbjct: 1477 EARSLSTELFKLKNSYEESLDHLESMKRENKNLQEEIADLTEQIGESGKNI--HELEKIR 1534

Query: 162  RSLKMKLTRMR-SIYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            + L+ +   ++ ++      LE  +  +LRA L  +Q    + + L EK+   +     Q
Sbjct: 1535 KQLEQEKAEIQTALEEAEGSLEHEEGKILRAQLEFNQVKADIERKLSEKDEEMEQAKRNQ 1594

Query: 220  ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            +R++      L      +   LR   ++  + N E    L + +R   + Q+        
Sbjct: 1595 QRMIDTLQSSLESETRSRNEALRLKKKMEGDLN-EMEIQLSQANRQASEAQKQLKSLHGH 1653

Query: 280  LTILEKTRE 288
            L   +   +
Sbjct: 1654 LKDAQLQLD 1662



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 68/217 (31%), Gaps = 20/217 (9%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            +        + +++     ++ E     ++ L+F   K D+  K  E  EE  ++   + 
Sbjct: 1536 QLEQEKAEIQTALEEAEGSLEHEEGKILRAQLEFNQVKADIERKLSEKDEE--MEQAKRN 1593

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                       + S  RS    L   + +  +  ++E + S      S  QK L  +   
Sbjct: 1594 QQRMIDTLQSSLESETRSRNEALRLKKKMEGDLNEMEIQLSQANRQASEAQKQLKSLHGH 1653

Query: 206  FEKNAVSQNDLNQ-----------QERIVYKSTLELRENIH--EQKNMLRHINELYDEAN 252
             +   +  +D  +            ER       EL E     EQ    R + E      
Sbjct: 1654 LKDAQLQLDDALRGNDDLKENIAIVERRNNLLQAELDELRSLVEQTERGRKLAEQELMDV 1713

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E    L   +  L   ++    + ++L    +   Q
Sbjct: 1714 SERVQLLHSQNTSLLNQKKKLEGDNTQLQTEVEEAVQ 1750


>gi|149187446|ref|ZP_01865744.1| fusaric acid resistance protein fusE [Vibrio shilonii AK1]
 gi|148838982|gb|EDL55921.1| fusaric acid resistance protein fusE [Vibrio shilonii AK1]
          Length = 376

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 97/250 (38%), Gaps = 22/250 (8%)

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD---LENKSSLLRALLSSHQKDL 199
           G+++ST   V +     +   ++      +   L R+D    E +    +A L+  ++D+
Sbjct: 58  GQFYSTTPIVSSVRGKVIEVDVEANQQLEKGDVLFRIDPIPFEAEVIRAKAALADAEQDV 117

Query: 200 TMMKNLFEK------NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +++ ++        A+++ D  ++E   Y+   +      +Q +      +  ++A L
Sbjct: 118 LQLESAYKAAQSDTIKALAERDKAEREYARYQKGFKKGAFTAQQVDTRLQTFKA-NQAAL 176

Query: 254 EFANYLKEISRDLEQNQ-----RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
           E A   +E +R   ++Q      T A   ++L   E   ++  + +P  G +        
Sbjct: 177 EAAQAKEESARLAFESQIYGENTTVAQLKAQLIQAEFNLQETVVRAPTDGFVTQLALR-P 235

Query: 309 S--NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                     PLM  V   +  YI A      +Q ++ G+ A   F        K FK  
Sbjct: 236 GMMAVPLPLAPLMTFVHTEENFYIGA-FRQNSLQRLQPGFEAEFLFRALP---GKVFKGK 291

Query: 367 IEKIDPIISQ 376
           + ++ P I +
Sbjct: 292 VVEVLPTIPE 301



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 53/171 (30%), Gaps = 14/171 (8%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I S   G + +  VE   Q+ +G  L   + I     +   K ++ +    +   +SA  
Sbjct: 66  IVSSVRGKVIEVDVEANQQLEKGDVLFRIDPIPFEAEVIRAKAALADAEQDVLQLESAYK 125

Query: 119 FLNNKYDVLEKAFESREEQLL---------DFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
              +         +  E +            F  +   T  + F    +++  +   + +
Sbjct: 126 AAQSDTIKALAERDKAEREYARYQKGFKKGAFTAQQVDTRLQTFKANQAALEAAQAKEES 185

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLN 217
              +            + L+A L   Q +  + + +        V+Q  L 
Sbjct: 186 ARLAFESQIYGENTTVAQLKAQL--IQAEFNLQETVVRAPTDGFVTQLALR 234


>gi|154416763|ref|XP_001581403.1| viral A-type inclusion protein [Trichomonas vaginalis G3]
 gi|121915630|gb|EAY20417.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3]
          Length = 4263

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 89/229 (38%), Gaps = 27/229 (11%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  +T ++++ ++  I+       + + A++ L  +   LE   E ++++  D + +   
Sbjct: 1312 DLKQTKEILEYREEQIEKFIAESVSIRDAIETLKQRISELEMLLEKKDKENNDKIAEIQE 1371

Query: 148  TCSKVFNYGISSVY-----------------RSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               +        +                  + +  K  ++  +  +   LE   +    
Sbjct: 1372 ENRQTLEQLAKQLQEAEEDINVLEGNCQVYEQEIAEKDKQIEQMTNDIKSLEEVINEQSN 1431

Query: 191  LLSSHQKDLTMMKNLFE--KNAVSQND--LNQQERIVYKSTLELREN---IHEQKNMLRH 243
             + S ++D+   +   +  K  VS+N+  + Q +  + +   E+++N   I + K  +  
Sbjct: 1432 TIDSLKQDVATKEEEIKQLKQTVSENEEVIKQLQTDIEQKDAEIQKNKEEIEQHKQTISQ 1491

Query: 244  INELYDEANLEFANYLKEIS---RDLEQNQRTFADEMSKLTILEKTREQ 289
             +E   +   E   + + I+    ++EQ + T ++    +  L+   EQ
Sbjct: 1492 RDETIKQLQSEIEQHKQTIADKNNEIEQLKNTISEREETIKQLQNEIEQ 1540



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 81/217 (37%), Gaps = 17/217 (7%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +    +  +K +++  +  +  EK+ L+    K    +   E  + +L++         +
Sbjct: 2369 QEKAKLIEEKTNLEQEKAKLIEEKTNLEQEKAKLIEEKTNLEQEKAKLIEEKTNLEQEKA 2428

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            K+     +++ +     L + +++   +  LE + + L    ++ +++      L E+  
Sbjct: 2429 KLIEEK-TNLEQEKSQLLDQKKNLEEEKQRLETEKAKLIEDKTNLEQEKA---QLLEQKK 2484

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE-------------ANLEFAN 257
              + +  + E    ++   + E   E +++   IN    +              N + + 
Sbjct: 2485 NLEEEKAKLEEEKAQAQKTIEEKDQEIEDLTSQINVKTKDLSLLESDFNNMSFTNADQST 2544

Query: 258  YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             +    ++L    +   D  ++L  + + R++    S
Sbjct: 2545 MISNYEKELSDKNKEINDLQNQLKQMTQNRDELQSKS 2581



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 84/216 (38%), Gaps = 15/216 (6%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +    I+  K +I +    I+  K  +   +N    L++  E  ++ + +   +      
Sbjct: 1806 QMQSEIEQNKQTIADREKEIEQHKQTIAERDNSIKQLQEEIEQHKQTIAERDAEIQKNKE 1865

Query: 151  KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL-----------RALLSSHQK 197
            ++   N  I+++    + K  ++  +  N  +L NK   L               S  ++
Sbjct: 1866 EIQQKNEAINALTNEGEEKRLKILELEANNENLINKVKELNDSVSDLNLSTENQNSVVKQ 1925

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN--LEF 255
                +K+L ++    +     Q++ + +   E++   + +      I +L +E       
Sbjct: 1926 MTDEIKDLNKQIHELEVKSENQQKQIEEKDKEIQSLTNTKAQNEELIKKLQEEVENLTNT 1985

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             N  +E  ++L++  ++  +  ++   L K ++++ 
Sbjct: 1986 KNQNEETIKNLQEQVQSLTETKNQNEDLIKKQQEQI 2021



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/206 (9%), Positives = 69/206 (33%), Gaps = 11/206 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +    I  +   I+ L+  +      +    +    L+   E  ++ + +   +      
Sbjct: 1729 QHKQTISQRDAEIEQLKQTVQQSDQTIAEKEDLIKQLQSEIEQHKQTIAERDAEIQKNKE 1788

Query: 151  KVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++      IS    S+K   + +        D E +    +  ++     +  ++   E+
Sbjct: 1789 EIEQQKQTISQRDESIKQMQSEIEQNKQTIADREKEIEQHKQTIAERDNSIKQLQEEIEQ 1848

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA------NLEFANYLKEI 262
            +   +  + +++  + K+  E+++       +     E   +       N    N +KE+
Sbjct: 1849 H---KQTIAERDAEIQKNKEEIQQKNEAINALTNEGEEKRLKILELEANNENLINKVKEL 1905

Query: 263  SRDLEQNQRTFADEMSKLTILEKTRE 288
            +  +     +  ++ S +  +    +
Sbjct: 1906 NDSVSDLNLSTENQNSVVKQMTDEIK 1931



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 73/202 (36%), Gaps = 3/202 (1%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                +  L +  +  L+  +  +++    L N     E    + ++ + D   + +   +
Sbjct: 2668 RDKKISQLLENEVNELKKKLSDKENENTSLKNTISERENEINNLKKNVSDKENEINQLKN 2727

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNR-LDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                   + + +    ++   + I   +  DLE  +       ++  K    +K L E+ 
Sbjct: 2728 N-LTMRETELNKMKDEEVKNAKQIIAQKDKDLEELNGKFNDTNNNLSKANDELKQLKEQI 2786

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
                  + Q +        E+++     +   + + EL D+   + +  + +++ ++++ 
Sbjct: 2787 ESLNKQIEQMKCSNNLKESEIKQLTSNLQKYKQALKELNDQNKQKDSQ-INQLNNEMKEL 2845

Query: 270  QRTFADEMSKLTILEKTREQKT 291
            Q+T      +L   +   +Q  
Sbjct: 2846 QQTLKQTQEQLKETQDQLKQTQ 2867


>gi|17988725|ref|NP_541358.1| acriflavin resistance protein A [Brucella melitensis bv. 1 str.
           16M]
 gi|17984537|gb|AAL53622.1| acriflavin resistance protein a precursor [Brucella melitensis bv.
           1 str. 16M]
          Length = 390

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 115 RIDDVEQRANMRVAQASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 174

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 175 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 233

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 234 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 281



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 76  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 128

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + S+      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 129 QASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 188

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 189 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 245

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 246 IGMGVTVALLADPSIEAEGNIRELS 270


>gi|315634210|ref|ZP_07889499.1| macrolide-specific efflux protein MacA [Aggregatibacter segnis ATCC
           33393]
 gi|315477460|gb|EFU68203.1| macrolide-specific efflux protein MacA [Aggregatibacter segnis ATCC
           33393]
          Length = 391

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 1/102 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G I    N V++    SG + K  V  G Q+ +G  +   +     + ++ +
Sbjct: 42  IEKNVVATGSIE-SVNTVDVGVQVSGKVTKLYVALGQQVKKGDLIAEIDSTTQINTLNTR 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
           K ++ + +      K+A D   + Y  L K +  +   L   
Sbjct: 101 KAALASYQAQFVARKTAYDVALSNYHRLTKLYAQKGTSLDSL 142



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 90/280 (32%), Gaps = 56/280 (20%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL---RALLSSHQKDLTMMKNLFE---KNA 210
           ++ +Y +L  ++   +   +  +D   + + L   +A L+S+Q      K  ++    N 
Sbjct: 68  VTKLYVALGQQVK--KGDLIAEIDSTTQINTLNTRKAALASYQAQFVARKTAYDVALSNY 125

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                L  Q+     S    +  +   K  +  + E   +A +E                
Sbjct: 126 HRLTKLYAQKGTSLDSLNSAKATLDNAKAEMNVVQENIKQAEIEV--------------- 170

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LT 328
                        E       I SPI GT++     S       +Q    IV  +     
Sbjct: 171 ----------NTAETNVSYTKITSPIDGTVIATPV-SEGQTVNSNQTTPTIVKVADLSKM 219

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE--- 385
            I+ +++   I  VK G   T  F   +D +   + A IE +DP  +   N+  +     
Sbjct: 220 RIKPEISEGDITKVKAGQEVT--FSILSDSKT-LYHAKIESVDPATTTISNSSTSSTTSS 276

Query: 386 ---------YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                    YY   + +      + N  LR G   E    
Sbjct: 277 TSSTSNSAVYYYANIIV-----ENPNQILRIGMTTENNIK 311


>gi|311279335|ref|YP_003941566.1| efflux transporter, RND family, MFP subunit [Enterobacter cloacae
           SCF1]
 gi|308748530|gb|ADO48282.1| efflux transporter, RND family, MFP subunit [Enterobacter cloacae
           SCF1]
          Length = 375

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 45/121 (37%), Gaps = 3/121 (2%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           ++ G ++   N V++++  +  + +     G  + +G  L T +D +    +      + 
Sbjct: 57  TTQGHLI-SLNQVDVRAQITSAVTQVVFHEGDFVKKGQLLFTLDDAQQQAALHHALSQLA 115

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
            ++  ++  K+  D +  K  + +    S +   L    + +S         I +    L
Sbjct: 116 VMQAQLN--KANHDLVRGKSLIKQNYISSSDWDTLVSTQQQYSAQVLAAQDDIRTAQAQL 173

Query: 165 K 165
            
Sbjct: 174 S 174


>gi|294013409|ref|YP_003546869.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292676739|dbj|BAI98257.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 304

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 58/205 (28%), Gaps = 16/205 (7%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V ++   +           R         +L      ++    +   Q   A+ MS   
Sbjct: 90  AVEQAEARIASAKATLGQARREATRDVALGDLVAKEAHEQNVARVATAQAALAEAMSARD 149

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                 ++  +++ + G +         ++    Q  M +V       +       ++  
Sbjct: 150 AAALNLKRTQVVASVNGVVTNLDLH-PGDFVAAGQQAMALV-DRDSLRVEGYFEETKLPL 207

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN--LQTQEYY---------EVI 390
           V  G   TVR    A     +  +I   I+        N     +  +          V 
Sbjct: 208 VCIGAPVTVRLMGEAQDLHGRVDSIAYGINDSSRSDSGNLLPTVEPTFSWVRLAQRIPVR 267

Query: 391 LKITDLAFSDNNIELRNGFPAEVLF 415
           +K+T +      ++L  G  A V  
Sbjct: 268 VKLTHI---PAEVKLIAGRTATVTI 289



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 14/137 (10%), Positives = 40/137 (29%), Gaps = 14/137 (10%)

Query: 3   HFMWKNLKRNHPASLKRMTLLSIIGIIGLITW-----SILLPIEISVSSSGEILNEDNVV 57
           +  +  L      S   + ++    +  +  W     S     +  V +        +VV
Sbjct: 2   NRPFSTLAATLGRSAATIVVVIAALLAAIWMWNHYERSPWTR-DGRVRA--------DVV 52

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            +     G++    V +   +  G  L   +       ++  +  I + +  +   +   
Sbjct: 53  RVTPDIGGLVTSVAVHDNQAVKAGDLLFVIDRPRYALAVEQAEARIASAKATLGQARREA 112

Query: 118 DFLNNKYDVLEKAFESR 134
                  D++ K    +
Sbjct: 113 TRDVALGDLVAKEAHEQ 129


>gi|209884005|ref|YP_002287862.1| secretion protein HlyD family protein [Oligotropha carboxidovorans
           OM5]
 gi|209872201|gb|ACI91997.1| secretion protein HlyD family protein [Oligotropha carboxidovorans
           OM5]
          Length = 343

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/281 (12%), Positives = 88/281 (31%), Gaps = 33/281 (11%)

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           L    +   +       +  +  + +L ++R     +   + + +L +A + +   +   
Sbjct: 79  LAALDAQPYREALAAAQAQVQVAQAELAKLRRGLRPQEITQAREALKQAQVVAIDAERNH 138

Query: 202 MKN--LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            +   L    + +Q   +       ++   +               E             
Sbjct: 139 QRQSSLLASGSTTQRAADAARTARDQAAAGVEVAKAALSQAFEGFRE------------- 185

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
                D+   +   A   +       +     +++P  GTI+  +     +       + 
Sbjct: 186 ----EDIAAAEARLAVAQAAQAQATISLTDTELIAPSDGTIIA-RVREPGSMVASQSTVY 240

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----- 374
            +    K  Y+RA +    +  +  G    V+    +D   K ++  I  I P       
Sbjct: 241 SLS-LDKPVYVRAYIGEPDLGRIAPGTAVRVK----SDSAGKIYRGQIGFISPRAEFTPK 295

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + +  +L+T   Y + + I +   +D++  LR G P  +  
Sbjct: 296 TVETTDLRTDLVYRLRIVIDE---ADHDTALRQGMPVTIEV 333



 Score = 36.5 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 19/188 (10%), Positives = 62/188 (32%), Gaps = 13/188 (6%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV--VEIK--SPFSGIIKKF 70
            + K   +   + ++GL   +  L I+ +    G +    NV   E++      G + + 
Sbjct: 8   RTAKLAIVFGAVFVLGLG--AAFLWIQRTDKGIGLLRLYGNVDIREVQLAFRQPGRVTQM 65

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
             + G  +  GT L   +     + +   +  ++  +  +   +  L       ++ +  
Sbjct: 66  AFDEGDAVSAGTCLAALDAQPYREALAAAQAQVQVAQAELAKLRRGL----RPQEITQAR 121

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              ++ Q++    + +          ++S   + +       +       +E   + L  
Sbjct: 122 EALKQAQVVAIDAERNHQRQSSL---LASGSTTQRAADAARTARDQAAAGVEVAKAALSQ 178

Query: 191 LLSSHQKD 198
                +++
Sbjct: 179 AFEGFREE 186


>gi|145297683|ref|YP_001140524.1| hypothetical protein ASA_0611 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850455|gb|ABO88776.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 349

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 75/212 (35%), Gaps = 6/212 (2%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           ++   +R    +   + LL     + ++ W  L        +   I  E   + + +   
Sbjct: 22  LYAPARRMAFRARWYLILLLAFSPVIILLW-YLGQEWWLTQAPAIITTE--PLLVVANGD 78

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID-TEKSALDFLNNK 123
           G I+      G  + QG  L+ FE       I+ +K  +K +  +    E+  +  L+ +
Sbjct: 79  GFIRNIYTAPGQSVSQGDVLMRFESPTLNANIEARKARLKAIELNKQLAEQEIVRILDGQ 138

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             + E++   +E    ++             Y  + +  +      +   +   +  L+ 
Sbjct: 139 ISIAERSSREQEGIYQEYANYRQQKLVSSAEYASALLSWTQSRIALQQARVEKAQQGLQV 198

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           +   L   L+S +  L   + L E  A+S+  
Sbjct: 199 REDHLTGPLASARHSLE--QELTEMEAMSRQQ 228



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/241 (12%), Positives = 92/241 (38%), Gaps = 12/241 (4%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
            A   +  +  ++    +     +    G+  S    +  +   ++  +++ +  R+++I
Sbjct: 61  QAPAIITTEPLLVVANGDGFIRNIYTAPGQSVSQGDVLMRFESPTLNANIEARKARLKAI 120

Query: 175 YLNRLDLENKS-SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
            LN+   E +   +L   +S  ++     + ++++ A      N +++ +  S       
Sbjct: 121 ELNKQLAEQEIVRILDGQISIAERSSREQEGIYQEYA------NYRQQKLVSSAEYASAL 174

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           +   ++ +       ++A          ++  L   + +   E++++  + + ++    L
Sbjct: 175 LSWTQSRIALQQARVEKAQQGLQVREDHLTGPLASARHSLEQELTEMEAMSRQQQP---L 231

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           +P  G +      +  ++     PL  I        I A V P+ +  ++ G+ A V+ P
Sbjct: 232 APARGKVSDVLVQA-GDWVFSGAPLALIAKREDPLVI-AYVQPRYLSSMETGHRAIVQLP 289

Query: 354 H 354
            
Sbjct: 290 S 290


>gi|254675300|ref|NP_598708.3| nuclear mitotic apparatus protein 1 [Mus musculus]
          Length = 2094

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/205 (9%), Positives = 65/205 (31%), Gaps = 2/205 (0%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           ++ +    ++  +         +  E+S  +    +   L    +S    L     +   
Sbjct: 426 DNTQLQTRVETLECERGKQEAQLLAERSRFEDEKQQLASLIADLQSSVSNLSQAKEEL-E 484

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL-LSSHQKDLTMMKNLF 206
             S+     +++   S+      ++        L+ ++   +A  L + Q+     + L 
Sbjct: 485 QASQAQGAQLTAQLTSMTGLNATLQQRDQELASLKEQAKKEQAQMLQTMQEQEQAAQGLR 544

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           ++     + L  +E+ + ++  E      +    L  + E  + +  E     +++    
Sbjct: 545 QQVEQLSSSLKLKEQQLEEAAKEQEATRQDHAQQLAIVAEAREASLRERDTARQQLETVE 604

Query: 267 EQNQRTFADEMSKLTILEKTREQKT 291
           ++          +L      R+   
Sbjct: 605 KEKDAKLESLQQQLQAANDARDNAQ 629



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 68/191 (35%), Gaps = 3/191 (1%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV---FNYGI 157
           + +  L+       +    L  + + LE     +E QLL    ++     ++        
Sbjct: 411 LQLDTLKQEAAKLATDNTQLQTRVETLECERGKQEAQLLAERSRFEDEKQQLASLIADLQ 470

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           SSV    + K    ++       L  + + +  L ++ Q+    + +L E+    Q  + 
Sbjct: 471 SSVSNLSQAKEELEQASQAQGAQLTAQLTSMTGLNATLQQRDQELASLKEQAKKEQAQML 530

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q  +   ++   LR+ + +  + L+   +  +EA  E     ++ ++ L          +
Sbjct: 531 QTMQEQEQAAQGLRQQVEQLSSSLKLKEQQLEEAAKEQEATRQDHAQQLAIVAEAREASL 590

Query: 278 SKLTILEKTRE 288
            +     +  E
Sbjct: 591 RERDTARQQLE 601



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 73/209 (34%), Gaps = 17/209 (8%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              L  + +    +LR   DT +  L+ +  + D   ++ + + +   D      ++ ++
Sbjct: 576 AQQLAIVAEAREASLRER-DTARQQLETVEKEKDAKLESLQQQLQAANDARDNAQTSVTQ 634

Query: 152 VFN------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                      I  ++  ++      R +     +LE +       L + Q+  T  + +
Sbjct: 635 AQQEKAELSQKIGELHACIEASHQEQRQVQARVTELEAQ-------LKAEQQKTTEREKV 687

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEI 262
            ++ A  Q  L   E  +  +   L E      + L+       E   E        +  
Sbjct: 688 VQEKAQLQEQLRALEESLKITKGSLEEEKRRAADALKEQQCRATEMEAESRSLMEQRERE 747

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++LEQ +       +++  LE+  + +T
Sbjct: 748 QKELEQEKAGRKGLEARIQQLEEAHQAET 776



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 83/234 (35%), Gaps = 18/234 (7%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC--HIDTEKSALDFLNNKYDVLE-- 128
              G    Q + L          +  +++  ++  +    +   +  +   N +   L+  
Sbjct: 850  SEGQPGQQQSQLAQLHASLAKAIQQVQEKEVRAQKLVDDLSALQEKMAATNKEVACLKTL 909

Query: 129  --KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
              KA E +E   L+ L +     ++  +       R        ++++      +  +  
Sbjct: 910  VLKAGEQQETASLELLKEPPRAANRASDQLGEQQGRPFSSTHAAVKAMEREAEQMGGELE 969

Query: 187  LLRALL--------SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             LRA L            +    +  L ++   +Q DL Q++    +  + L+  ++EQ+
Sbjct: 970  RLRAALIKSQGQQQEERGQQEREVARLTQERGQAQADLAQEKAAKAELEMRLQNTLNEQR 1029

Query: 239  NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                 + E    A  E     +E    L + +   A + ++L  L++T EQ  I
Sbjct: 1030 VEFAALQEALAHALTEKEGTDQE----LAKLRGQEAAQRTELKELQQTLEQLKI 1079



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 58/215 (26%), Gaps = 10/215 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            E    +  ++         +  +    + L    + L+    S EE+            
Sbjct: 668 TELEAQLKAEQQKTTEREKVVQEKAQLQEQLRALEESLKITKGSLEEEKRRAADALKEQQ 727

Query: 150 SKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLF 206
            +         S+    + +   +      R  LE +   L     +  + L   +    
Sbjct: 728 CRATEMEAESRSLMEQREREQKELEQEKAGRKGLEARIQQLEEAHQAETEALRHELAEAT 787

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY-----DEANLEFANYLKE 261
                ++++  +  R V            E+        E       ++   E      E
Sbjct: 788 ASQHRAESECERLIREVESRQKRFEARQQEEARYGAMFQEQLMALKGEKTGQEVQEEAVE 847

Query: 262 ISRDLE--QNQRTFADEMSKLTILEKTREQKTILS 294
           I  + +  Q Q   A   + L    +  ++K + +
Sbjct: 848 IHSEGQPGQQQSQLAQLHASLAKAIQQVQEKEVRA 882



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 70/214 (32%), Gaps = 7/214 (3%)

Query: 67   IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
            +K+  V    +  +    L    +ET             LR  + + +  ++      + 
Sbjct: 1247 LKRLVVAESEKSQKLEERLRLLQVETASNSARAAERSSALREEVQSLREEVEKQRVVSEN 1306

Query: 127  LEKAFESREEQLLDFLGKYHSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   S+ E+  +   +  +   K F     +S++          +  +   +   +  
Sbjct: 1307 SRQELASQAERAEELGQELKAWQEKFFQKEQALSALQLEHTSTQALVSELLPAKHLCQQL 1366

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             +   A     +++L   K         Q +L + +R +      LR+ I EQ+   + +
Sbjct: 1367 QAEQAAAEKRFREELEQSKQ-AAGGL--QAELMRAQREL-GELGSLRQKIVEQERAAQQL 1422

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                  +  E  + LK+    L +  R   +  +
Sbjct: 1423 RAEKA-SYAEQLSMLKKAHGLLAEENRGLGERAN 1455



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 9/174 (5%)

Query: 116  ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
             LD    KY     A  +  E  L  + +   + S+      +    +    L   +   
Sbjct: 1464 ELDQAREKYVQELAAVRTDAETHLAEMRQEAQSTSRELEVMTAKYEGAKVKVLEERQRFQ 1523

Query: 176  LNRLDLENKSSLLRALLSSHQK----DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
              R  L  +   L   L+ H +        +K    +   SQ ++ + +  + +   +L 
Sbjct: 1524 EERQKLTAQVEELSKKLTEHDQASKVQQQKLKAFQAQRGESQQEVQRLQTQLNELQAQLS 1583

Query: 232  ENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRT---FADEMSKL 280
            +     ++    + +     +A  +    L+E  +DLE+ Q+       E  +L
Sbjct: 1584 QKEQAAEHYKLQMEKAKTHYDAKKQQNQKLQEQLQDLEELQKENKELRSEAERL 1637


>gi|324499921|gb|ADY39978.1| 227 kDa spindle- and centromere-associated protein [Ascaris suum]
          Length = 2038

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 18/211 (8%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
               +       I      IK+LR   +  ++    L  + +V + +    E ++ D  G+
Sbjct: 1505 FELQARGKEAQIRHLNEQIKSLRTEAENAQAEARALREREEVWDTSKFKLESKMRDHEGE 1564

Query: 145  YH--STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK-DLTM 201
                S     F     S+  S+K   +++++      DL +    L+  LS  +  ++ +
Sbjct: 1565 SQRVSILMSSFETERQSLNESVKKLASQLQASEGKNADLRDDVEKLKRDLSKAESLEVEL 1624

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             ++L EK  V+Q                LRE +   K+ L + N    +   E      E
Sbjct: 1625 RRSLEEKTRVAQ------------DASGLREQLSIAKSDLANANSRKQQLESELLTVRSE 1672

Query: 262  ISRD---LEQNQRTFADEMSKLTILEKTREQ 289
            +      L       +D   +L   +  + +
Sbjct: 1673 LREQKQHLNDASNRLSDLQRQLVDAQNEKNR 1703



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 68/212 (32%), Gaps = 6/212 (2%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           F D  +   + + + ++         ++ A+   +  Y  +        E   + + KY 
Sbjct: 292 FSDTASESGMVINQDTVLVEAVKRFRDQQAVPPGSQLYGEMRMPTSGDAELHKELMKKYE 351

Query: 147 STCSKVFN-----YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            +  ++        G +    +L+ +L R +      L+   K  +L    S        
Sbjct: 352 ESIERIIELESRGDGSAGKVSNLEAELKRTKDRLTECLETLRKLHILAKESSQDADKAIG 411

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +        V    L     ++     EL++   + KN    INEL  +         + 
Sbjct: 412 VLPPGSAQVVPSEVLRSVRYVIRSRDNELQQLQRKLKNADTQINELEVQLEG-AEEARRR 470

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           + + L   ++  AD+   L    +  ++    
Sbjct: 471 LEKQLADARKDIADQTKTLDEANREIKRLEER 502


>gi|322514882|ref|ZP_08067900.1| macrolide-specific efflux protein MacA [Actinobacillus ureae ATCC
           25976]
 gi|322119186|gb|EFX91331.1| macrolide-specific efflux protein MacA [Actinobacillus ureae ATCC
           25976]
          Length = 175

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 59/162 (36%), Gaps = 6/162 (3%)

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            LE+ ++ + + + L               N L      +++ +         +      
Sbjct: 2   ALEVAQSNYTRLSKLYKQASASQSDLETAKNTLAAAKASVDEAKSQIKSAQISVADARTN 61

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHVKK 344
                I+SP+ GTIV     S       +Q    IV  +      I+ +++   I  V K
Sbjct: 62  LNYTQIVSPMDGTIVSVPI-SVGQIVNSAQTSPTIVHVADLSKMLIKLEISEGDIAQVTK 120

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
           G    + F   A+    K+ + I+ +DP ++   ++  + +Y
Sbjct: 121 GQ--NMTFSTLAEPNH-KYHSKIDSVDPALTTLSDDSASNKY 159


>gi|289549071|ref|YP_003474059.1| efflux transporter RND family, MFP subunit [Thermocrinis albus DSM
           14484]
 gi|289182688|gb|ADC89932.1| efflux transporter, RND family, MFP subunit [Thermocrinis albus DSM
           14484]
          Length = 339

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 67/206 (32%), Gaps = 26/206 (12%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
             +Y     LR  +     + +   ELY EA       L E  ++ +  +   +    KL
Sbjct: 96  ADLYWQMAALRTQVEHAWRLYQVKKELY-EAGAVPKLELMEAEQNYKVLKAQLSGLEKKL 154

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
           +          I +P+ G +   ++          + ++  V       +  ++ P+   
Sbjct: 155 SYYGGGSGSSIITAPVDGVVYEIKA-QPGEMVSPDRVILS-VADPNRILLALQI-PQDRD 211

Query: 341 -HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI--TDLA 397
             ++KG    +          +  + +++ +  +++    +      Y V +K   +D A
Sbjct: 212 VSLQKGQRVKLILA------GRSLEGVVQYVGNVVNPDTKS------YSVYVKPLCSDCA 259

Query: 398 FSDNNIELRNGFPAEVLFTAKNTTLA 423
           F  N +         V       +L 
Sbjct: 260 FRINQL-------LSVKIQTGERSLL 278



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 15/76 (19%)

Query: 40  IEISVSSS----GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           +++         G +     V        GI++  +V+ G Q+ +G  L T +  +  DL
Sbjct: 46  LDVVALVQPDKEGTVQISAKVQ-------GILQDIKVKVGDQVRKGQILATLKSPDMADL 98

Query: 96  IDLKKVSIKNLRCHID 111
                  +  LR  ++
Sbjct: 99  Y----WQMAALRTQVE 110


>gi|261324415|ref|ZP_05963612.1| efflux transporter [Brucella neotomae 5K33]
 gi|261300395|gb|EEY03892.1| efflux transporter [Brucella neotomae 5K33]
          Length = 365

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 53/193 (27%), Gaps = 27/193 (13%)

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN-----------QRTFADEMSKLTI 282
           I E       I     E  L+ A   ++    L              +   A+    L  
Sbjct: 96  IAELDAETEQIAVAKAETALKDAQTTRQRIARLRATNTATEVQAVGAELAVANAQLALQD 155

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
            +    ++ + +PI G +      +  NY      + +I        I   V  +    +
Sbjct: 156 AQLALSRRMVRAPITGIVGILPVNA-GNYVTAQTSIARI-DDRSTVLIDIWVPERFAPQI 213

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G   T     +        K  I  +D ++ +    L       V  ++ +       
Sbjct: 214 KVGQPLTAESTAFPGEIY---KGRINAVDNMLDEASRTLH------VRAEVPNAED---- 260

Query: 403 IELRNGFPAEVLF 415
             LR G    V  
Sbjct: 261 -RLRAGMSFSVTI 272



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 3/105 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKS 115
           +    SG + K  V  G  + +G  +   +       +   + ++K+    R  I   ++
Sbjct: 71  VTPYSSGYMTKLHVRAGDTVKEGDLIAELDAETEQIAVAKAETALKDAQTTRQRIARLRA 130

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                  +    E A  + +  L D          +    GI  +
Sbjct: 131 TNTATEVQAVGAELAVANAQLALQDAQLALSRRMVRAPITGIVGI 175


>gi|253581879|ref|ZP_04859103.1| multidrug resistance protein [Fusobacterium varium ATCC 27725]
 gi|251836228|gb|EES64765.1| multidrug resistance protein [Fusobacterium varium ATCC 27725]
          Length = 410

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 84/272 (30%), Gaps = 27/272 (9%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            + +   +L   +    S+Y N    E+   +  + L   + D  M +  +    +S++ 
Sbjct: 124 ALENATANLGKSVRAYSSLYSNAAQTEDDVKVKESQLKKAETDFAMDRASYNAGLISKHQ 183

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
               +  +  +   L ++    +N     +                       N      
Sbjct: 184 YETSKNNLNIAISSLNQSKKALENAKIQADSNSI------------------YNHPDVQQ 225

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            ++          +  I +P +GTI     F        SQ LM I+  +   ++ A + 
Sbjct: 226 AIAAYKDAYVNLMRTKIFAPESGTIAKKSVF-LGQKISPSQELMTIIDLNN-VWVDANLK 283

Query: 336 PKQIQHVKKGYTATVRFPHYADIRE-KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             Q++ VK G  A +        +     + +       +S       T  + +++ ++ 
Sbjct: 284 ETQLKGVKPGDEAEL-VSDINGKKYIGYVQGLSAGTGSSLSLLPAQNATGNWIKIVQRVP 342

Query: 395 DLAFSDNNIELRNGF-PA----EVLFTAKNTT 421
                D +   +NG  P     E +      T
Sbjct: 343 VRIVIDKDSLKKNGMIPVGSSIEAVIDIGKET 374



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 61/195 (31%), Gaps = 24/195 (12%)

Query: 20  MTLLSIIGIIGLITWSILL----PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
           + +L++IGII    W +        + +           N   I S   G I +  +E+ 
Sbjct: 52  LIILAVIGIIYGAYWLLYGRNYVKTDDA-------YVNGNQNVITSQVGGTITQIYIEDT 104

Query: 76  SQILQGTPLLTFEDIE-------TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             + +G  L   +D +        T  +     +  +L  +    +  +    ++    E
Sbjct: 105 QFVEKGQLLAVIDDTDYKIALENATANLGKSVRAYSSLYSNAAQTEDDVKVKESQLKKAE 164

Query: 129 KAFESREEQLLDFLGKYH--STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL----DLE 182
             F          L   H   T     N  ISS+ +S K           N +    D++
Sbjct: 165 TDFAMDRASYNAGLISKHQYETSKNNLNIAISSLNQSKKALENAKIQADSNSIYNHPDVQ 224

Query: 183 NKSSLLRALLSSHQK 197
              +  +    +  +
Sbjct: 225 QAIAAYKDAYVNLMR 239


>gi|255039371|ref|YP_003089992.1| hypothetical protein Dfer_5637 [Dyadobacter fermentans DSM 18053]
 gi|254952127|gb|ACT96827.1| conserved hypothetical protein [Dyadobacter fermentans DSM 18053]
          Length = 311

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 87/252 (34%), Gaps = 17/252 (6%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +YL +  LE +     + L        + K     + V  ++L  +++ +         
Sbjct: 69  QLYLRKKQLEAQIRATGSRLPDIVAQTNVYKQQIAVSQVRLDNLLHEQKRIQNLVKADAA 128

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD---EMSKLTILEKTREQ 289
              +  ++   + EL  +  +       + S    Q     AD    + ++  +     +
Sbjct: 129 TPKQLDDVNAQVEELQKQLEVIRKQDAAQTSVLKTQTSGLRADVQPLVVQIEQINDQLAK 188

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             I++ + GT++  +   ++  A   +PL KI        +RA VT  Q+  ++      
Sbjct: 189 SRIVNEVNGTVLT-KYAEANEVAAAGKPLYKIA-DLSTIILRAYVTGDQLTGIQLNQQVK 246

Query: 350 VRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           V     A    ++    IE I         + Q  + +    Y V +++       N+  
Sbjct: 247 VLVDS-AGGHYRELPGTIEWISSKAEFTPKTIQTKDERANLVYAVKIRV------KNDGY 299

Query: 405 LRNGFPAEVLFT 416
           L+ G   EV   
Sbjct: 300 LKIGMYGEVALK 311



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 70/220 (31%), Gaps = 7/220 (3%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            + +  +G I    +E G  +  G  +   + ++        +  I+     +    +  
Sbjct: 36  IVSAEATGRIMALSLEEGQALKAGETVGYIDSLQLYLRKKQLEAQIRATGSRLPDIVAQT 95

Query: 118 DFLNNKYDVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
           +    +  V +   ++   E++ +  L K  +   K  +   + V    K      +   
Sbjct: 96  NVYKQQIAVSQVRLDNLLHEQKRIQNLVKADAATPKQLDDVNAQVEELQKQLEVIRKQDA 155

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
                L+ ++S LRA +      +  + +   K+ +    +N+    V     E  E + 
Sbjct: 156 AQTSVLKTQTSGLRADVQPLVVQIEQINDQLAKSRI----VNEVNGTVLTKYAEANE-VA 210

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                L  I +L       +    +     L Q  +   D
Sbjct: 211 AAGKPLYKIADLSTIILRAYVTGDQLTGIQLNQQVKVLVD 250


>gi|221213861|ref|ZP_03586834.1| putative fusaric acid resistance protein [Burkholderia multivorans
           CGD1]
 gi|221166038|gb|EED98511.1| putative fusaric acid resistance protein [Burkholderia multivorans
           CGD1]
          Length = 300

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 6/126 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               VV I    SGI+    V +   + +G  L   +       +      ++  +  +D
Sbjct: 41  VRAKVVNIAPDVSGIVTDVLVADNQAVRRGDVLFRIDSERFRYALAQADAQVELRKAELD 100

Query: 112 ------TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                 + ++ LD      +V E A  + ++ L ++     +      N   S V   + 
Sbjct: 101 MRRQQASRRALLDSAVVSAEVREDAGSAAKQALANYQAARAARDVARLNLARSEVRAPVD 160

Query: 166 MKLTRM 171
             +T +
Sbjct: 161 GYITNL 166



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 62/185 (33%), Gaps = 15/185 (8%)

Query: 206 FEKNAVSQNDLN---QQER-----IVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  AV + D+      ER         + +ELR+   + +        L D A +  A 
Sbjct: 62  ADNQAVRRGDVLFRIDSERFRYALAQADAQVELRKAELDMRRQQASRRALLDSAVVS-AE 120

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
             ++     +Q    +    +   +      +  + +P+ G I     ++  +YA     
Sbjct: 121 VREDAGSAAKQALANYQAARAARDVARLNLARSEVRAPVDGYITNLNLYA-GDYASAGVA 179

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            + ++  +   ++       ++  V+ G  A +R               +E I   IS +
Sbjct: 180 RLALI-DAHSYWVYGYFEETKLPQVRVGDPAEIRLLG----GGPPLTGHVESIARGISDR 234

Query: 378 DNNLQ 382
           DN   
Sbjct: 235 DNPAG 239


>gi|168209385|ref|ZP_02635010.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
 gi|170712452|gb|EDT24634.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
          Length = 376

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 51/133 (38%), Gaps = 1/133 (0%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V  +G+I  E           G + K +VENG  + +G  L T+++ +    ++  ++ +
Sbjct: 48  VFVNGKIEPEKVENIFLDATKGTVDKVEVENGDVVEKGDTLFTYKNDQVQSQVEQLELQL 107

Query: 104 KNLRCH-IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            + +    +  K   +      D+ +   E++  Q         +   ++    +    +
Sbjct: 108 NSAKSQKEEINKQNAEAKKQLEDLKKAGLENQMSQGGQMPNLGQNAGGEISTGSVDEQIK 167

Query: 163 SLKMKLTRMRSIY 175
            L+ ++  ++   
Sbjct: 168 LLEKQIKALKDKE 180



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 65/212 (30%), Gaps = 26/212 (12%)

Query: 212 SQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEF--------ANYLKEI 262
           SQ +  + +    KS  E + +   E K  L  + +   E  +           N   EI
Sbjct: 98  SQVEQLELQLNSAKSQKEEINKQNAEAKKQLEDLKKAGLENQMSQGGQMPNLGQNAGGEI 157

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           S      Q      + K     K +E   + +PI G ++  +S +       +QP   I 
Sbjct: 158 STGSVDEQIKL---LEKQIKALKDKEYYKVTAPIGGKVILAESST-----NPTQP--YIT 207

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI-IEKID------PIIS 375
             S   YI   V  K    +K+G    +           K  ++    ID          
Sbjct: 208 VESGDYYISGSVNEKDQPKIKEGQEVQITILSTNKNINGKISSVGNTPIDNGASLAAQTG 267

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
            Q        YYEV +         N   ++ 
Sbjct: 268 AQGGAGGNMSYYEVKITPDSQEDLTNGFHVQA 299


>gi|58580368|ref|YP_199384.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58424962|gb|AAW73999.1| ABC transporter permease [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 462

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 59/409 (14%), Positives = 124/409 (30%), Gaps = 107/409 (26%)

Query: 15  ASLKRMTL--LSIIGIIGLITWSILL-----------PIEISVSSSGEIL----NEDNVV 57
              +R     L+ + ++  I W++              + I+  S G+++     +  V+
Sbjct: 58  TQWRRWLWPGLAAVAVLAGIGWAVTAWSAGSRSFDASRVRIATVSQGDLVRDIAADGRVI 117

Query: 58  EIKSP-----FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
              SP      +G +    V  G  + QG  L   +  E              LR  +  
Sbjct: 118 AANSPVLYAISAGTVT-LSVVAGDVVKQGQELARIDSPE--------------LRSKLAQ 162

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E++ L  L  +                                   S   +L   L R  
Sbjct: 163 EQATLAGLEAE-----------------------------------SSRAALDATLARAN 187

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +  L      ++ +  R        DL   +  ++  AV Q +L + +  + K+ ++L+ 
Sbjct: 188 ASKLTDQAKVDRQAAAR--------DLERYQRGYDSGAVPQVELAKAQDTLKKTDIDLQ- 238

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
             H Q++          +A  +           L   QR    E+ +        +  T+
Sbjct: 239 --HAQRDAALKSQGADLDARNKRL---------LADRQRAVVAEVQR------QVDALTL 281

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR- 351
           LSP  G +   Q+   +  A  + P++ ++       +  KV     + +  G  A +  
Sbjct: 282 LSPFDGQVGQVQAVQHTQVA-ANAPILGVI-DLSKFEVEIKVPESFARDLAIGMPAQLTS 339

Query: 352 -----FPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
                FP        +     +        +Q   L+  +     + + 
Sbjct: 340 GSGEPFPGAMSAVSPEVVNGEVTARIRFTDKQPPGLRQSQRMSARVVMD 388


>gi|51245975|ref|YP_065859.1| multidrug ABC transporter [Desulfotalea psychrophila LSv54]
 gi|50877012|emb|CAG36852.1| related to multidrug-efflux transport protein A precursor
           [Desulfotalea psychrophila LSv54]
          Length = 396

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 65/162 (40%), Gaps = 9/162 (5%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE----ISRDLEQNQRTFADEMSKL 280
           K  ++L   + + +      N    ++N + A+ L +      ++ ++   ++  + + +
Sbjct: 131 KMLIKLDSAVLQAELDRAVANRNLSKSNYKRADNLLKDHAISRQERDEAYASWQLDRANV 190

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            + +    +  I +P AGT +  +  S  +Y    Q L+ +    +   I   ++ K + 
Sbjct: 191 RLAQAQLAKTIIQAPFAGT-LGLRQVSLGDYVMPGQALVNL-EAIEELKIEFSISGKHLA 248

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
            VK G    +R   Y       F   I  I+P I+ Q  +L 
Sbjct: 249 EVKTGQKIKLRSSAYPQQ---SFIGQIYAINPQINVQSRSLT 287


>gi|315181922|gb|ADT88835.1| secretion protein HlyD family protein [Vibrio furnissii NCTC 11218]
          Length = 281

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/228 (11%), Positives = 74/228 (32%), Gaps = 20/228 (8%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLEL--RENIHEQKNMLRHINELYDEANLEFANYLK 260
           + + +   + + D  + +  + + T ++  ++   +      H  +   +  L     ++
Sbjct: 57  QPVTKGELIFRVDDTRYQAKIKELTAQVENKQYSLDLARHQYHRRQQLTDRKLISEETVE 116

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
               + E  Q +     ++L   +   ++  + +P  GT++        NY  Q   ++ 
Sbjct: 117 SARINTELAQASLDIAKAQLHSAQINLDRTQVHAPADGTLINLNLR-EGNYVSQGSSVIS 175

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +V  +   Y+       ++  +K G TA +          +     +  I   I+  + +
Sbjct: 176 LVKANS-FYVTGYFEETKLPLIKVGQTAKISL----MSGGEPLTGSVVSIGKAIADSNTS 230

Query: 381 LQTQEYYEV-----------ILKIT-DLAFSDNNIELRNGFPAEVLFT 416
              Q   +V            + +   L      I +  G    +   
Sbjct: 231 SNGQLLPQVQQTFNWVRLAQRIPVDIKLDPMPEGINISAGMTVSIYLQ 278



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 82/226 (36%), Gaps = 11/226 (4%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQIL 79
           +TL+ +I  +    W     +    +  G I  E  V+ +    SG +K+ +V++   + 
Sbjct: 3   LTLVIVIVAVIAGHWVWNHYLYSPWTRDGRIRAE--VITVAPDVSGWVKEVKVKDNQPVT 60

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA---LDFLNNKYDVLEKAFESREE 136
           +G  +   +D      I      ++N +  +D  +        L ++  + E+  ES   
Sbjct: 61  KGELIFRVDDTRYQAKIKELTAQVENKQYSLDLARHQYHRRQQLTDRKLISEETVESARI 120

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR-MRSIYLNRLDLENKSSLLRALLSSH 195
                        +++ +  I+     +       + ++ L   +  ++ S + +L+ ++
Sbjct: 121 NTELAQASLDIAKAQLHSAQINLDRTQVHAPADGTLINLNLREGNYVSQGSSVISLVKAN 180

Query: 196 QKDLTM-----MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
              +T         L +    ++  L      +  S + + + I +
Sbjct: 181 SFYVTGYFEETKLPLIKVGQTAKISLMSGGEPLTGSVVSIGKAIAD 226


>gi|294665813|ref|ZP_06731083.1| HlyD family secretion protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604420|gb|EFF47801.1| HlyD family secretion protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 294

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 73/217 (33%), Gaps = 19/217 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V +            +  E +  + + +  +     L D    E A   +    ++++ 
Sbjct: 61  VVDRARYAIALEQARAALAERQATLTQLRREIARDRSLQDLVAAEDAEVRR---SNVQKA 117

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   A   S + + +   ++  + SP  G +   ++    +Y    +P++ ++  +    
Sbjct: 118 QAAVATAQSAVDLAQLNLDRTQVRSPADGRVSD-RTVRVGDYVNAGRPVVAVL-DTGSFR 175

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQD 378
           +       ++Q V  G    V+            ++I   I+           P ++   
Sbjct: 176 VDGYFEETRLQGVHPGQRVDVQLMGEPVTLHGHVQSIAAGIEDRYRSGSAGALPNVTPAF 235

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + ++  +   V + +  +     +++L  G  A V  
Sbjct: 236 DWVRLAQRIPVRIALDRV---PAHVQLIAGRTATVSI 269



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/129 (11%), Positives = 43/129 (33%), Gaps = 6/129 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV++    SG+++   V +   + +G  L   +       ++  + ++   +  + 
Sbjct: 27  VGADVVQVAPDVSGLVESVAVADNQPVTRGQLLFVVDRARYAIALEQARAALAERQATLT 86

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +  +    +  D++        E             + V     +     L +  T++
Sbjct: 87  QLRREIARDRSLQDLVAA------EDAEVRRSNVQKAQAAVATAQSAVDLAQLNLDRTQV 140

Query: 172 RSIYLNRLD 180
           RS    R+ 
Sbjct: 141 RSPADGRVS 149


>gi|312114932|ref|YP_004012528.1| efflux transporter RND family, MFP subunit [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311220061|gb|ADP71429.1| efflux transporter, RND family, MFP subunit [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 409

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 80/288 (27%), Gaps = 49/288 (17%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  +LL   G   +    +       +   +                ++N+     A L 
Sbjct: 82  RLTELLAEEGDTIAEGQVLARLSRDILEAQIAQNAASFAKTQAVIEQVKNQIVESEATLK 141

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +     +K L E   VSQ   ++++     +   L       K               
Sbjct: 142 QAEDSFNRVKPLRETGTVSQAAFDERDAAFRTARARLAAQREGLK--------------- 186

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                       L   ++      ++   L+    +  I SP AG +   ++    + + 
Sbjct: 187 ------------LADAEQLL--IRAQRRELDVKLARTDIRSPAAGIVSR-RTARVGSVSS 231

Query: 314 -QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               PL +++       + A+V    +  ++ G  A +             +  +  +  
Sbjct: 232 AAGDPLFRVI-KGGEVELDAEVPEFHMAKLRAGQRARIEIEGLGAR-----EGQLRLVSQ 285

Query: 373 IISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +S             V + +          +LR G  A+ L +A   
Sbjct: 286 EVSPTTRLG------RVRISL------GTTPDLRIGTFAQALISAGKR 321



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 66/233 (28%), Gaps = 9/233 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
            +G ++  + V+         + +   E G  I +G  L           I     S   
Sbjct: 62  VTGSLVAREEVLVGPEIDGLRLTELLAEEGDTIAEGQVLARLSRDILEAQIAQNAASFAK 121

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +  I+  K+ +          E +F   +   L   G          +    +    L 
Sbjct: 122 TQAVIEQVKNQIVESEATLKQAEDSFNRVKP--LRETGTVSQAAFDERDAAFRTARARLA 179

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM----MKNLFEKNAVSQNDLNQQER 221
            +   ++     +L +  +   L   L+             +      +VS    +   R
Sbjct: 180 AQREGLKLADAEQLLIRAQRRELDVKLARTDIRSPAAGIVSRRTARVGSVSSAAGDPLFR 239

Query: 222 IVYKSTLELRENIHE---QKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++    +EL   + E    K        +  E        L+ +S+++    R
Sbjct: 240 VIKGGEVELDAEVPEFHMAKLRAGQRARIEIEGLGAREGQLRLVSQEVSPTTR 292


>gi|227115474|ref|ZP_03829130.1| peptidase M50 [Pectobacterium carotovorum subsp. brasiliensis
           PBR1692]
          Length = 358

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 57/166 (34%), Gaps = 16/166 (9%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLIT-WSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           W   K  HP +  R  LL    +  L+  W   + I   + +         V  + SP  
Sbjct: 60  WSMRKSIHPIAFLRSALLCSALLFILLYPWGGSIHIPAVLEAE-------KVSTLYSPVP 112

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
             + +  V +G ++  G  LL    ++    +D+++  I  L+       +  +      
Sbjct: 113 AQVNQLHVTDGQRVDAGDILLELTSVDLDYRLDIERQRIAQLQQQRQRGATRQET----- 167

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
                  +  + QL + L +Y    ++     I +    +   L R
Sbjct: 168 ---ASEIQVMDRQLAEALARYRGLAAQRQRLTIRAPQTGVVRDLAR 210



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 46/114 (40%), Gaps = 2/114 (1%)

Query: 211 VSQNDLNQQER-IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           V+Q  +   +R       LEL     + +  +        +   +     +E + +++  
Sbjct: 115 VNQLHVTDGQRVDAGDILLELTSVDLDYRLDIERQRIAQLQQQRQRGATRQETASEIQVM 174

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYN-QSFSSSNYAQQSQPLMKIV 322
            R  A+ +++   L   R++ TI +P  G +    +  ++  +     PL+++V
Sbjct: 175 DRQLAEALARYRGLAAQRQRLTIRAPQTGVVRDLARDMTAGRWLTADTPLLRVV 228


>gi|221201987|ref|ZP_03575023.1| putative fusaric acid resistance protein [Burkholderia multivorans
           CGD2M]
 gi|221204883|ref|ZP_03577900.1| putative fusaric acid resistance protein [Burkholderia multivorans
           CGD2]
 gi|221175740|gb|EEE08170.1| putative fusaric acid resistance protein [Burkholderia multivorans
           CGD2]
 gi|221178070|gb|EEE10481.1| putative fusaric acid resistance protein [Burkholderia multivorans
           CGD2M]
          Length = 300

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 6/126 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               VV I    SGI+    V +   + +G  L   +       +      ++  +  +D
Sbjct: 41  VRAKVVNIAPDVSGIVTDVLVADNQAVRRGDVLFRIDSERFRYALAQADAQVELRKAELD 100

Query: 112 ------TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
                 + ++ LD      +V E A  + ++ L ++     +      N   S V   + 
Sbjct: 101 MRRQQASRRALLDSAVVSAEVREDAGSAAKQALANYQAARAARDVARLNLARSEVRAPVD 160

Query: 166 MKLTRM 171
             +T +
Sbjct: 161 GYITNL 166



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 62/185 (33%), Gaps = 15/185 (8%)

Query: 206 FEKNAVSQNDLN---QQER-----IVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +  AV + D+      ER         + +ELR+   + +        L D A +  A 
Sbjct: 62  ADNQAVRRGDVLFRIDSERFRYALAQADAQVELRKAELDMRRQQASRRALLDSAVVS-AE 120

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP 317
             ++     +Q    +    +   +      +  + +P+ G I     ++  +YA     
Sbjct: 121 VREDAGSAAKQALANYQAARAARDVARLNLARSEVRAPVDGYITNLNLYA-GDYASAGVA 179

Query: 318 LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
            + ++  +   ++       ++  V+ G  A +R               +E I   IS +
Sbjct: 180 RLALI-DAHSYWVYGYFEETKLPQVRVGDPAEIRLLG----DGPPLTGHVESIARGISDR 234

Query: 378 DNNLQ 382
           DN   
Sbjct: 235 DNPAG 239


>gi|167521597|ref|XP_001745137.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776751|gb|EDQ90370.1| predicted protein [Monosiga brevicollis MX1]
          Length = 2346

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/214 (10%), Positives = 73/214 (34%), Gaps = 12/214 (5%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           +   T   +  +  +  L   + + ++  +          +   +R +   +       +
Sbjct: 689 NASETQKANELEAQLAELTKQLQSAEADCEASAAAEREANEKL-ARLQAEQEASADREKS 747

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR----ALLSSHQKDLTMMKN 204
            +      ++ +   L  +   +      R  LE + + L+    + L+   ++   ++ 
Sbjct: 748 ANSDLAKQLAELQALLATRDNELAEERKQRDGLEQELAALKKDMDSKLAEDSEESARLRK 807

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             ++      +L  +   + +   + ++   E+K+ LR   +   +   + A  L  +  
Sbjct: 808 ERDEERAKAEELQSELDQLRQQNEDNKQKCKEEKDALRQERDKALQERDDLAERLSALET 867

Query: 265 DLEQNQRTFAD-------EMSKLTILEKTREQKT 291
           +  Q +   AD         ++++ LE    Q+ 
Sbjct: 868 ECAQLKEQLADKDAEIERLKARISELEDILSQRE 901



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 75/231 (32%), Gaps = 29/231 (12%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA--FESREEQLLDFLGKY 145
           ++ +    +       + L       ++A   L ++   + +   FE R ++L     K 
Sbjct: 595 DERQAVADLREHAKDAEELELLRRRLRNAEQRLGDQDKEISRLEPFEERSQELEAEHKKM 654

Query: 146 HSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +T   +      + S    L+ KL  + S          K++ L A L+   K L   +
Sbjct: 655 QATMDGLIRDKSKLRSELDELRAKLAALESENAKNASETQKANELEAQLAELTKQLQSAE 714

Query: 204 ------------------NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                              L  +   S +        + K   EL+  +  + N L    
Sbjct: 715 ADCEASAAAEREANEKLARLQAEQEASADREKSANSDLAKQLAELQALLATRDNELAEER 774

Query: 246 ELYDEANLEFANYLKEISRDLEQN-------QRTFADEMSKLTILEKTREQ 289
           +  D    E A   K++   L ++       ++   +E +K   L+   +Q
Sbjct: 775 KQRDGLEQELAALKKDMDSKLAEDSEESARLRKERDEERAKAEELQSELDQ 825



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 62/199 (31%), Gaps = 30/199 (15%)

Query: 83  PLLTFED--IETTDLIDLKKVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQ 137
            L T ++   E     D  +  +  L+  +D    E S       K    E+A     + 
Sbjct: 762 LLATRDNELAEERKQRDGLEQELAALKKDMDSKLAEDSEESARLRKERDEERAKAEELQS 821

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            LD L + +    +       ++ +     L     +      LE + + L+  L+    
Sbjct: 822 ELDQLRQQNEDNKQKCKEEKDALRQERDKALQERDDLAERLSALETECAQLKEQLADKDA 881

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++  +K            +++ E I+ +   EL                     N E   
Sbjct: 882 EIERLK----------ARISELEDILSQREGELTAATA---------------LNEELQF 916

Query: 258 YLKEISRDLEQNQRTFADE 276
            L E++ +L   +R   D 
Sbjct: 917 RLDELTGNLADKEREAEDL 935



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 84/274 (30%), Gaps = 30/274 (10%)

Query: 42  ISVSSSG----EILNEDNVVEIKSPFSGIIKK-FQVENGSQILQGTPLLTFEDIETTDLI 96
            +VS+ G    ++  +     ++S   G I +   + N          L     E   ++
Sbjct: 376 KTVSAPGGSSPDLRTDRRERSVQSTELGTINEDATIRN----------LRRRIAELEKML 425

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN-- 154
             +   +   R             +N  + LEK        L D   + +    ++    
Sbjct: 426 ADRTAELDAARASATRNNLDYGEASNSVERLEKELNRVRGVLEDTSTENNELREELDRLK 485

Query: 155 ------YGISSVYRSLKMKLTRMRSIYLNRLDLEN-KSSLLRALLSSHQKDLTMM----K 203
                      V +    +    R +   R DLE  +   L+   S H  ++  M    K
Sbjct: 486 MMLARLEREQQVKQGGITRAEHERLLMEQRQDLEEEQRRALKDARSQHGAEIKQMSNRLK 545

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIH--EQKNMLRHINELYDEANLEFANYLKE 261
            L    A    D +  +  +  +  ELR      +    L    E   E   +    L+E
Sbjct: 546 TLEMSEATLARDKDDAQHDLEAANDELRTCQARLQAAEALLQTREAELEDERQAVADLRE 605

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            ++D E+ +       +    L    ++ + L P
Sbjct: 606 HAKDAEELELLRRRLRNAEQRLGDQDKEISRLEP 639


>gi|144898594|emb|CAM75458.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 595

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 77/206 (37%), Gaps = 10/206 (4%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           ++   + + ++LR  ++ E+  +  L      LE+ + +   +  +              
Sbjct: 111 IMAEAEAASQHLRQDLERERQRVTQLEQLTAELERVYRAEMAKAQERGQSEGQNALDAAQ 170

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL---------LRALLSSHQKDLTMMKNL 205
             I+++   L  + +R +    +  +   K++          ++AL ++  K+L++ + L
Sbjct: 171 DRITALEEELAAQASRHQEQLRHYSEEAAKAAETGMAVLRDEIKALNANQAKELSLSRQL 230

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           +   A S+++  +Q+    +   E      +Q +    +  L      E A         
Sbjct: 231 YLDQAESESETLRQQVAAAELDKETALRQAQQHHD-AALAALRTRHAEELAETRINGEWA 289

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT 291
           L   +R   D   +L   E+T  + T
Sbjct: 290 LGDAKRQITDLRRRLNEQEETHAEAT 315



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 62/207 (29%), Gaps = 14/207 (6%)

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE--EQLLDFLGKYHSTCSKVFNYG 156
            + + +     I+ E +  D      D+  +  E  E   +    L +     ++     
Sbjct: 273 TRHAEELAETRINGEWALGDAKRQITDLRRRLNEQEETHAEATASLREKFEHAAQSLVRA 332

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
              +           ++  L+   LE   +    L      +    + L  ++  +  D 
Sbjct: 333 QGRIAELSTELGQTRQAQILDGDRLEGAQARENQLAEQLAAEREARRQLEIQSGSTLADA 392

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL--------KEISRDLEQ 268
              ER+  +    L+  +  ++ +L       +E   E              +++  +  
Sbjct: 393 LAAERLASERAQRLQAELETERRVLHEQTGKLEELRAEIQRLRDGTPPPPPPDVAAIIAD 452

Query: 269 NQRTFA----DEMSKLTILEKTREQKT 291
           + R  A    D   ++  LE+   Q  
Sbjct: 453 HNRELARLRLDSSRRIAELERQVAQSE 479


>gi|52424509|ref|YP_087646.1| AcrA protein [Mannheimia succiniciproducens MBEL55E]
 gi|52306561|gb|AAU37061.1| AcrA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 398

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 53/142 (37%), Gaps = 1/142 (0%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           S  SG IK+  V++G  + +G  L+  ++      +   +  + ++R       + +   
Sbjct: 86  SQASGTIKRIYVKSGQAVKKGDVLVELDNAVEEATLKASEAQLPSVRLTYQRYANLIKSQ 145

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +     L+ A  + ++ + +      S   +        +   +++   +  S     + 
Sbjct: 146 SVSQTELDSAKAAYDQLVANINSLKASIERRKILAPFDGITGIVQVNEGQYISAATEIVR 205

Query: 181 LENKSSLLRALLSSHQKDLTMM 202
           +E+  S ++   S  Q  L  +
Sbjct: 206 VED-ISSMKVDFSVSQNQLEDL 226



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 72/202 (35%), Gaps = 23/202 (11%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
            AV + D+   E         L+ +  +  ++        +    +  +       +L+ 
Sbjct: 101 QAVKKGDVL-VELDNAVEEATLKASEAQLPSVRLTYQRYANLIKSQSVS-----QTELDS 154

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
            +  +   ++ +  L+ + E++ IL+P  G I      +   Y   +  +++ V      
Sbjct: 155 AKAAYDQLVANINSLKASIERRKILAPFDG-ITGIVQVNEGQYISAATEIVR-VEDISSM 212

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK-FKAIIEKIDPIISQQDNNLQTQEYY 387
            +   V+  Q++ +  G          +D R  + F A +  I+P +++           
Sbjct: 213 KVDFSVSQNQLEDLHIGQKV----TATSDARTGETFAAKVTAIEPAVNKSTG-------- 260

Query: 388 EVILKITDLAFSDNNIELRNGF 409
             ++ +      ++  +L +G 
Sbjct: 261 --LIDVQATFAPEDGKKLLSGM 280


>gi|34495921|ref|NP_900136.1| hypothetical protein CV_0466 [Chromobacterium violaceum ATCC 12472]
 gi|34101776|gb|AAQ58144.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 244

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 71/226 (31%), Gaps = 19/226 (8%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             +R  L S        +   + +A+   +     R       +      + +     + 
Sbjct: 29  GRIRVQLMSRHAVTLSSEIPAKISAIPVVEGGSFRRGQALVEFDCSSYRAQLRKAQASLE 88

Query: 246 ELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                 + N + A Y    + +L Q Q    +  +  +  +    + +I +P  G +   
Sbjct: 89  AASQLLKVNNQLAKYNSVGTLELTQAQGKAKEAAADASYAQTLVSKCSIAAPFEGRVAK- 147

Query: 304 QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
           +S +   Y     P++ IV  +    +R  V  K +  +K G     RF    D     F
Sbjct: 148 RSAAVHQYVNPGNPILDIV-DTDSLELRMLVPSKWLATLKPGS----RFTVAVDELGASF 202

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            A IE++   I      +       + + + D         L  G 
Sbjct: 203 PARIERLGAQIDPVSQTI-------LAIGVID----GKAANLLPGM 237


>gi|21233586|ref|NP_639503.1| fusaric acid resistance protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66770552|ref|YP_245314.1| fusaric acid resistance protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188993778|ref|YP_001905788.1| Membrane fusion protein [Xanthomonas campestris pv. campestris str.
           B100]
 gi|21115450|gb|AAM43385.1| fusaric acid resistance protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575884|gb|AAY51294.1| fusaric acid resistance protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167735538|emb|CAP53753.1| Membrane fusion protein [Xanthomonas campestris pv. campestris]
          Length = 311

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 71/217 (32%), Gaps = 19/217 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V +            +  E +  + + +  +     L D    E A   +    ++++ 
Sbjct: 81  VVDRARYAIALEQARAALAERQATLTQLRREIARDRSLQDLVAAEDAEVRR---SNVQKA 137

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   A   S + + +   ++  + SP  G I   ++    +Y    +P++ ++  +    
Sbjct: 138 QAAVATAQSAVDLAQLNLDRTEVRSPADGHISD-RTVRVGDYVSAGRPVVAVL-DTGSFR 195

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQD 378
           +       ++Q V  G    V             ++I   I+           P ++   
Sbjct: 196 VDGYFEETRLQGVHPGQRVDVHLMGEPVTLHGHVQSIAAGIEDRYRTGSAGALPNVTPAF 255

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + ++  +   V + +  +      ++L  G  A V  
Sbjct: 256 DWVRLAQRIPVRIALDAV---PAQVQLIAGRTATVTI 289



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/108 (11%), Positives = 39/108 (36%), Gaps = 1/108 (0%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV++    SG++++  V +   + +G  L   +       ++  + ++   +  + 
Sbjct: 47  VGADVVQVAPDVSGLVEQVAVADNQAVTRGQLLFVVDRARYAIALEQARAALAERQATLT 106

Query: 112 TEKSALDFLNNKYDVLEKA-FESREEQLLDFLGKYHSTCSKVFNYGIS 158
             +  +    +  D++     E R   +        +  S V    ++
Sbjct: 107 QLRREIARDRSLQDLVAAEDAEVRRSNVQKAQAAVATAQSAVDLAQLN 154


>gi|13362351|dbj|BAB36305.1| putative membrane protein [Escherichia coli O157:H7 str. Sakai]
 gi|209747966|gb|ACI72290.1| putative membrane protein [Escherichia coli]
 gi|209747968|gb|ACI72291.1| putative membrane protein [Escherichia coli]
 gi|209747970|gb|ACI72292.1| putative membrane protein [Escherichia coli]
          Length = 464

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 113 AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 170

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 171 QFKVALAQAQGQLAKDKATLTNARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 226

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 227 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 259



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 171 QFKVALAQAQGQLAKDKATLTNARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 230

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 231 DEASVASAQLQLD 243


>gi|66810738|ref|XP_639076.1| hypothetical protein DDB_G0283441 [Dictyostelium discoideum AX4]
 gi|60467686|gb|EAL65705.1| hypothetical protein DDB_G0283441 [Dictyostelium discoideum AX4]
          Length = 971

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 65/197 (32%), Gaps = 4/197 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           ++    D  K   + L+    +  S +  +  +  + +   +SR  + ++ L + + +  
Sbjct: 679 QSKQQFDQLKEQREQLKLEAISLDSEITNVVTEKIIAQSEADSRIRENIEKLEEKYKSEI 738

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K        +     +   +++     +  LE +       L    + L  ++   E + 
Sbjct: 739 KAREESKLQLETKQFLANQKLQDRIDQQKQLEQQRIDRDKELRLLNEKLEQLETDSEISD 798

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                L ++ R +     + +E   + + +++ +         E  +   E S     +Q
Sbjct: 799 TPLQKLREEIRSLKIQAEKDKEECEDSQELVQQMESDIKRLEYEVLDESSEASL----HQ 854

Query: 271 RTFADEMSKLTILEKTR 287
           R       KL   E   
Sbjct: 855 RQLEILEKKLREAEDEL 871



 Score = 43.1 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 73/191 (38%), Gaps = 11/191 (5%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           + L+  ++ E+ A + +  K    +K +E   +QL   L +       +    I      
Sbjct: 284 EELKKRLEQERRAKEEILKK----KKQYEDEIKQLKLNLEQGIKDKQLLEEKEIKIQEEK 339

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            + +L     +   R DL N SS    L      +  +  +L E     Q ++NQ ER V
Sbjct: 340 SEAQLKHREEMKRLREDLLNASSRNEYLSIELNNEQALKSDLLENRKKIQTNVNQLERDV 399

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANY------LKEISRDLEQNQRTFA-DE 276
                +L +    +  +   + +   E   E   Y       KEI R+ E  ++    ++
Sbjct: 400 DSEKRDLSQIQKAKDKLSASVKKTLMELEQETKTYNLRDKTKKEIEREKEILRQEREKEQ 459

Query: 277 MSKLTILEKTR 287
           M KL + ++ R
Sbjct: 460 MEKLRVEKEKR 470


>gi|254250112|ref|ZP_04943432.1| Secretion protein HlyD [Burkholderia cenocepacia PC184]
 gi|124876613|gb|EAY66603.1| Secretion protein HlyD [Burkholderia cenocepacia PC184]
          Length = 434

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 61/149 (40%), Gaps = 13/149 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V ++G +     V ++ +  SG +K  +V+ G ++ +G  L   + + + + +   
Sbjct: 85  LENAVLATGALQAFRQV-DVGAQVSGQLKTLKVKLGDKVTKGQWLAEIDPVISENALRQA 143

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + S ++LR    +  + L          E AF  ++  L D      +T  + F    ++
Sbjct: 144 RASEESLRAQQQSTTAQLTQA-------ELAFRRQQAMLPD-----DATSRESFEAAKAT 191

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +        +    I   R+ +E   + L
Sbjct: 192 LDVQRATLASLAAQIRSARIQIETAQANL 220



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 72/224 (32%), Gaps = 5/224 (2%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            L+    ++  Q L          + V   G    +R + +       +   ++ L +K 
Sbjct: 63  TLKACAPTKHPQYLSAPVTRGDLENAVLATGALQAFRQVDVGAQVSGQLKTLKVKLGDKV 122

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           +  + L      D  + +N   +   S+  L  Q++       +       Q+ ML    
Sbjct: 123 TKGQWLAEI---DPVISENALRQARASEESLRAQQQSTTAQLTQAELAFRRQQAMLPDDA 179

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              +      A    +    L            ++   +       I++PI G +V   +
Sbjct: 180 TSRESFEAAKATLDVQ-RATLASLAAQIRSARIQIETAQANLGYTRIVAPIDGEVVAIVT 238

Query: 306 FSSSNYAQQSQ-PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
                   Q Q P++  + +     ++A+V+   +  V  G TA
Sbjct: 239 QEGQTVIAQQQAPVILKLANLDTMTVKAQVSEADVIRVSAGQTA 282


>gi|118590161|ref|ZP_01547564.1| efflux transporter, RND family, MFP subunit [Stappia aggregata IAM
           12614]
 gi|118437133|gb|EAV43771.1| efflux transporter, RND family, MFP subunit [Stappia aggregata IAM
           12614]
          Length = 364

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 61/216 (28%), Gaps = 25/216 (11%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE---ISRD 265
             V    L  Q         +L    +++      IN    +  L+    L+E   IS+ 
Sbjct: 82  KLVELPVLESQHVKEGDLIAKLDTTDYDRAVRQATINAEQAKRELDRLETLRERSVISQS 141

Query: 266 LEQNQRTFADE-MSKLTILEKTREQKTILSPIAGTIVYNQS--FSSSNYAQQSQPLMKIV 322
               Q+   D  +  L   ++  +  T+ +P  G +       F++ +       L  + 
Sbjct: 142 TYDEQKNKHDLALETLKEAKQNLKYTTLKAPFDGIVSVRLVDNFTTVSVGTPVVRLHDV- 200

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATV--RFPHYADIREKKFKAIIEKIDPIISQQDNN 380
                  +   V       V     A++  RFP Y D                ++Q    
Sbjct: 201 ---SEIQVDINVAEALFGRVSASEVASIEARFPAYGDKHFPLTYREHSSQVDDVAQT--- 254

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                 Y V L +           L  G  A V   
Sbjct: 255 ------YRVTLAMPREGAEQ----LSPGMTASVTVK 280


>gi|122920502|pdb|2I1J|A Chain A, Moesin From Spodoptera Frugiperda At 2.1 Angstroms
           Resolution
 gi|122920505|pdb|2I1K|A Chain A, Moesin From Spodoptera Frugiperda Reveals The Coiled-Coil
           Domain At 3.0 Angstrom Resolution
 gi|118133213|gb|ABK60307.1| moesin [Spodoptera frugiperda]
          Length = 575

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 61/152 (40%), Gaps = 6/152 (3%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           + ++ ++     EK A      K  +   A E  E++  ++  +      ++     + +
Sbjct: 300 IDVQQMKAQAREEKLAKQAQREKLQLEIAARERAEKKQQEYQDRLRQMQEEMERSQANLL 359

Query: 161 YRS--LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM----MKNLFEKNAVSQN 214
                +     ++R +   + +LE + + L+A++   ++   M     + L ++    Q 
Sbjct: 360 EAQDMILRLEEQLRQLQAAKEELEQRQNELQAMMQRLEETKNMEAAERQKLEDEIRAKQE 419

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           ++++ ++ V     E R    E ++  R  +E
Sbjct: 420 EVSRIQQEVELKDSETRRLQEEVEDARRKQDE 451



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 53/136 (38%), Gaps = 2/136 (1%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V +          +    R  L+ + +         Q+    ++ + E+   SQ +L + 
Sbjct: 302 VQQMKAQAREEKLAKQAQREKLQLEIAARERAEKKQQEYQDRLRQMQEEMERSQANLLEA 361

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEM 277
           + ++ +   +LR+    ++ + +  NEL    +   E  N      + LE   R   +E+
Sbjct: 362 QDMILRLEEQLRQLQAAKEELEQRQNELQAMMQRLEETKNMEAAERQKLEDEIRAKQEEV 421

Query: 278 SKLTILEKTREQKTIL 293
           S++    + ++ +T  
Sbjct: 422 SRIQQEVELKDSETRR 437


>gi|297484808|ref|XP_002694628.1| PREDICTED: citron (rho-interacting, serine/threonine kinase 21)
           [Bos taurus]
 gi|296478632|gb|DAA20747.1| citron (rho-interacting, serine/threonine kinase 21) [Bos taurus]
          Length = 1976

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 7/188 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ++    DL D  K +++NL    + E      + ++   +  A +S+   L   + + 
Sbjct: 676 VLDNQIKKDLAD--KETLENLMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVEL 733

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                   N  + +  R++K +   +  +   +  LE ++  L A     ++ L   + +
Sbjct: 734 SEANKLAANSSLFT-QRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQL---EKI 789

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             ++   +N L + E  + + +LE  E   E K  L  +     E   +    L+     
Sbjct: 790 SHQDHSDKNRLLELETRLREVSLEHEEQKLELKRQLTELQLSLQERESQLT-ALQAARAA 848

Query: 266 LEQNQRTF 273
           LE   R  
Sbjct: 849 LESQLRQA 856



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 3/207 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESREEQLLDFL 142
              +     D +  K+   +  R  +  EKS  +    +   +   EK   +R +Q +   
Sbjct: 975  VMDLEALNDELLEKERQWEAWRSVLGDEKSQFECRVRELQRMLDTEKQSRARADQRITES 1034

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +      K     I ++ ++LK +  +  S+     DLE K ++L     S Q+ L   
Sbjct: 1035 RQVVELAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQKLETE 1094

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            + L ++    Q  L QQ  +       L + + E  +    +     +   +  N     
Sbjct: 1095 RELKQRLLEEQAKLQQQMDLQKNHIFRLTQGLQEALDRADLLKTERSDLEYQLENIQVLY 1154

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQ 289
            S +  + + T + +   +  L+   +Q
Sbjct: 1155 SHEKVKMEGTISQQTKLIDFLQAKMDQ 1181



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/247 (11%), Positives = 72/247 (29%), Gaps = 40/247 (16%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-----------LDFLNNKYDVLEKAFES 133
            L     E    +   + +   L   +   K+            +  L    D +++ F++
Sbjct: 828  LQLSLQERESQLTALQAARAALESQLRQAKTELEETTAEAEEEIQALTAHRDEIQRKFDA 887

Query: 134  REE------QLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                      L + L +     +++ N    +S            +  +      L  + 
Sbjct: 888  LRNSCTVITDLEEQLNQLTEDNAELNNQNFYLSKQLDEASGANDEIVQLRSEVDHLRREI 947

Query: 186  SLLRALLSSHQKDLTMMKN---LFEKNAVSQN----DLNQQERIVYK------------- 225
            +     L+S ++ +  +K    + E+  +       +L ++ER                 
Sbjct: 948  TEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDELLEKERQWEAWRSVLGDEKSQFE 1007

Query: 226  -STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                EL+  +  +K      ++   E+       +KE   ++   Q+   ++  K   L 
Sbjct: 1008 CRVRELQRMLDTEKQSRARADQRITESRQVVELAVKEHKAEILALQQALKEQKLKAESLS 1067

Query: 285  KTREQKT 291
                   
Sbjct: 1068 DKLNDLE 1074


>gi|260271475|ref|NP_001002822.2| coiled-coil alpha-helical rod protein 1 [Rattus norvegicus]
          Length = 869

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 79/203 (38%), Gaps = 5/203 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + L+   ++  R  +D E      L  +     +     E + L  + +      +   
Sbjct: 587 DLSLELEQLREERNRLDAELQLSAHLIQQEVGRVREQGEAEHRHLTEVAQQLEQELQRAQ 646

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAVS 212
             ++SV + L+      +        L  + +  + +   +  +K   +   L E+ + +
Sbjct: 647 ESLASVGQQLEAARQGQQESTEEAASLRQELTQQQEIYGQALQEKVAEVESRLREQLSDT 706

Query: 213 QNDLNQQERIVYKSTLELRENIHEQ---KNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +  LN+  R   K+ + LR+  H+    K   + +  L DEA  E    L    ++LE++
Sbjct: 707 KRRLNEARREQAKAVVSLRQIQHKATLEKERNQELRRLQDEARKEEGQRLTRRVQELERD 766

Query: 270 QRTFADEMSKLTILEKTREQKTI 292
           +      + +  +L + ++Q+ +
Sbjct: 767 KNLMLATLKQEGLLSRYKQQRLL 789



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 67/209 (32%), Gaps = 28/209 (13%)

Query: 97  DLKKVSIKNLRCHIDT-----------------------EKSALDFLNNKYDVLEKAFES 133
            L    +  ++  +++                       E++ LD        L +    
Sbjct: 559 GLMARKLALVQLRLESCPPPEPAPPPDTDLSLELEQLREERNRLDAELQLSAHLIQQEVG 618

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  +  +   ++ +  ++     +     SL     ++ +    + +   +++ LR  L+
Sbjct: 619 RVREQGEAEHRHLTEVAQQLEQELQRAQESLASVGQQLEAARQGQQESTEEAASLRQELT 678

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN---ELYDE 250
             Q+     + L EK A  ++ L +Q     +   E R    +    LR I     L  E
Sbjct: 679 QQQEIYG--QALQEKVAEVESRLREQLSDTKRRLNEARREQAKAVVSLRQIQHKATLEKE 736

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSK 279
            N E      E  ++  Q       E+ +
Sbjct: 737 RNQELRRLQDEARKEEGQRLTRRVQELER 765



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/236 (10%), Positives = 72/236 (30%), Gaps = 24/236 (10%)

Query: 80  QGTPLLTFEDI-ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
           +   L   +   +  D +   +  +          + AL     + +V   + ++ + +L
Sbjct: 432 KAQDLQHRDSTKQLRDQVAELQEQVTAQSQEQAILQRALQDKTAQVEVERMSTKTLKMEL 491

Query: 139 LDFLGKY--HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                        +      +  V  ++     R++S          +   L   LS   
Sbjct: 492 SQAQEARWRQEQQAASAEEQLKFVVSAMNSTQARLQSTMTRVDQAVARIPSLCNRLSYAV 551

Query: 197 KDLTMMKNLFEKNAVSQN---------------------DLNQQERIVYKSTLELRENIH 235
           + +  +K L  +                           +L Q      +   EL+ + H
Sbjct: 552 RKVHTIKGLMARKLALVQLRLESCPPPEPAPPPDTDLSLELEQLREERNRLDAELQLSAH 611

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +  +  + E  +  +       +++ ++L++ Q + A    +L    + +++ T
Sbjct: 612 LIQQEVGRVREQGEAEHRHLTEVAQQLEQELQRAQESLASVGQQLEAARQGQQEST 667


>gi|209523185|ref|ZP_03271741.1| GUN4 domain protein [Arthrospira maxima CS-328]
 gi|209496336|gb|EDZ96635.1| GUN4 domain protein [Arthrospira maxima CS-328]
          Length = 451

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 71/228 (31%), Gaps = 12/228 (5%)

Query: 77  QILQGTPLL-----TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD-FLNNKYDVLEKA 130
           Q+     ++       ++   T  ID    +   L   I+   S L+  +       +  
Sbjct: 62  QVESAQLMVSHLQSQLDET--TRKIDGFTTTQSRLESQIEAIASQLESQIEAIASQSQSR 119

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS--SLL 188
            ES+ E +   L   +   +      + ++    + +L        ++L  +N++  S L
Sbjct: 120 LESQIEAIASQLQSQNEAIASQLESQVKAIASQSQSRLESQIEAIASQLQSQNEAIASQL 179

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
           ++   +    L            SQ+ L  Q + +          I    + L+  NE  
Sbjct: 180 QSQNEAIASQLQSQNEAIASQ--SQSRLESQVKAIASQLQSQSSQIEAIASQLQSQNEAI 237

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
                     +   S+   ++QR       K        + K I  P+
Sbjct: 238 ASQLQSQNEAIASQSQSRLESQRKAIASHLKSQRKAIASQPKQISKPV 285


>gi|189536977|ref|XP_696132.3| PREDICTED: myosin-7-like [Danio rerio]
          Length = 1938

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 77/214 (35%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   LR  +D   S ++ L      LEK   + E+Q+ ++  KY
Sbjct: 1208 QIDNLQRVKQKLEKEKS--ELRLELDDVVSNMEQLAKAKANLEKMCRTLEDQMSEYRTKY 1265

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                + R L+ K + +  +  ++     +   L+  L    
Sbjct: 1266 EEGQRSINDFTMQKARLQTENGELTRQLEEKDSLVSQLTRSKQSYTQQIEDLKRQLEEEV 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+ ++ +  + +      Y+   ++  
Sbjct: 1326 KAKNALAHAVQSARHDSDLLREQYEEEQEAKAELQRSLSKANSEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L++  + L Q  +   + +  +     + E+ 
Sbjct: 1386 EELEDAKKKLAQRLQDAEEAVEAVNAKCSSLEKT 1419



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 64/207 (30%), Gaps = 6/207 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E  ++ +  + +       I+  K            LE+A    E        K+  + S
Sbjct: 1144 ELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATASTLRKKHADSVS 1203

Query: 151  KV------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +             + +        +  +  N   L    + L  +  + +  ++  + 
Sbjct: 1204 DLGEQIDNLQRVKQKLEKEKSELRLELDDVVSNMEQLAKAKANLEKMCRTLEDQMSEYRT 1263

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             +E+   S ND   Q+  +     EL   + E+ +++  +         +  +  +++  
Sbjct: 1264 KYEEGQRSINDFTMQKARLQTENGELTRQLEEKDSLVSQLTRSKQSYTQQIEDLKRQLEE 1323

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
            +++          S     +  REQ  
Sbjct: 1324 EVKAKNALAHAVQSARHDSDLLREQYE 1350



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 71/189 (37%), Gaps = 5/189 (2%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
              ++L   +   K++ +   +  + +++  ++ +E++ D   +   +   +  + +  + 
Sbjct: 1475 EARSLSTELFKLKNSYEESLDHLESMKRENKNLQEEIADLTEQIGESGKNI--HELEKMR 1532

Query: 162  RSLKMKLTRMRSIYLNRLDL--ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            + L+ +   +++            +  +LRA L   Q    + + L EK+   +     Q
Sbjct: 1533 KQLEQEKAEIQAALEEAEGSLEHEEGKILRAQLEFSQIKADIERKLSEKDEEMEQAKRNQ 1592

Query: 220  ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            +R++      L      +   LR   ++  + N E    L + +R   + Q+        
Sbjct: 1593 QRMIDTLQSSLESETRSRNEALRLKKKMEGDLN-EMEIQLSQANRQASEAQKQLKSLQGH 1651

Query: 280  LTILEKTRE 288
            L   +   +
Sbjct: 1652 LKDAQMQLD 1660



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 69/217 (31%), Gaps = 20/217 (9%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            +        + +++     ++ E     ++ L+F   K D+  K  E  EE  ++   + 
Sbjct: 1534 QLEQEKAEIQAALEEAEGSLEHEEGKILRAQLEFSQIKADIERKLSEKDEE--MEQAKRN 1591

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                       + S  RS    L   + +  +  ++E + S      S  QK L  ++  
Sbjct: 1592 QQRMIDTLQSSLESETRSRNEALRLKKKMEGDLNEMEIQLSQANRQASEAQKQLKSLQGH 1651

Query: 206  FEKNAVSQNDLNQQ-----------ERIVYKSTLELRENIH--EQKNMLRHINELYDEAN 252
             +   +  +D  +            ER       EL E     EQ    R + E      
Sbjct: 1652 LKDAQMQLDDALRANDDLKENIAIVERRNNLLQAELDELRSLVEQTERGRKLAEQELMDV 1711

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E    L   +  L   ++    + ++L    +   Q
Sbjct: 1712 SERVQLLHSQNTSLLNQKKKLEGDNTQLQTEVEEAVQ 1748


>gi|153803117|ref|ZP_01957703.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|229526313|ref|ZP_04415717.1| multidrug resistance efflux pump [Vibrio cholerae bv. albensis
           VL426]
 gi|254284775|ref|ZP_04959742.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|297579811|ref|ZP_06941738.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|124121336|gb|EAY40079.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|150425560|gb|EDN17336.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|229336471|gb|EEO01489.1| multidrug resistance efflux pump [Vibrio cholerae bv. albensis
           VL426]
 gi|297535457|gb|EFH74291.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|327485283|gb|AEA79689.1| Membrane fusion component of tripartite multidrug resistance system
           [Vibrio cholerae LMA3894-4]
          Length = 376

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 69/204 (33%), Gaps = 9/204 (4%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           E     L    +  +    ++K + E++  +Q + ++ +R   +      + +   +   
Sbjct: 112 EASQGALGLESTLKEAQAAVLKAIAERDK-AQREYDRYQRGYQRGAF-TEQQMDTTRQAY 169

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           +      + A  +       +  ++     T A  +++L   E   EQ  + +P  G + 
Sbjct: 170 KAAQAALEVAQSKQEQAQIALDSEVGGENTTVAQLLAELRKAEFDLEQTIVRAPTDGYVT 229

Query: 302 YNQSFSSS--NYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
                     +      P+M  V   +  Y  A      +Q ++ G+ A   F       
Sbjct: 230 QLALR-PGMMSVPLPLAPVMTFVHTEEKIYTAA-FRQNSLQRLQPGFAAEFMFRALP--- 284

Query: 360 EKKFKAIIEKIDPIISQQDNNLQT 383
            K FK  + ++ P I +     + 
Sbjct: 285 GKVFKGEVIEVLPAIGESQIQARG 308



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/147 (12%), Positives = 48/147 (32%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G + +  V+    + QG  L   + I     +   K  +K        L   +   ++A+
Sbjct: 72  GRVVEVPVKPNQPLKQGDVLFRIDPIPFEADVARLKAKVKEASQGALGLESTLKEAQAAV 131

Query: 118 DFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                + D  ++ ++  +   Q   F  +   T  + +    +++  +   +     ++ 
Sbjct: 132 LKAIAERDKAQREYDRYQRGYQRGAFTEQQMDTTRQAYKAAQAALEVAQSKQEQAQIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                     + L A L   + DL   
Sbjct: 192 SEVGGENTTVAQLLAELRKAEFDLEQT 218


>gi|238024076|ref|YP_002908308.1| putative RND efflux membrane-fusion protein [Burkholderia glumae
           BGR1]
 gi|55509027|gb|AAV52812.1| probable RND efflux membrane-fusion protein precursor [Burkholderia
           glumae BGR1]
 gi|237878741|gb|ACR31073.1| Probable RND efflux membrane-fusion protein precursor [Burkholderia
           glumae BGR1]
          Length = 379

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 59/205 (28%), Gaps = 17/205 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           +    + + Q E +V       R  +   +            +    A    E     +Q
Sbjct: 83  HFTPGSQVRQGEPLVQLYDDPERAQLASLQAKAVFAKSQLARSQT-LAPVGAEPRSVFDQ 141

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
           +Q  +    +    +E    QK + +P AG I   +  +   Y    + +  +       
Sbjct: 142 HQFDYRSASADARQVEAVIRQKLVRAPFAGEI-GIRQVNLGQYLNAGEAIATLT-DLDTL 199

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           Y    +  K +  ++ G    +    Y       F   +  I+P +     N+  Q    
Sbjct: 200 YANFTLPQKYVGQLRVGQAVHLATDAYPGR---DFVGKVTTIEPRVGDATRNVTVQ---- 252

Query: 389 VILKITDLAFSDNNIELRNGFPAEV 413
                      +    LR G  A V
Sbjct: 253 -------ATLDNRGHPLRPGMYAHV 270



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 33/116 (28%), Gaps = 1/116 (0%)

Query: 56  VVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
              + +P  +G +       GSQ+ QG PL+   D      +   +      +  +   +
Sbjct: 67  RQVMIAPEVAGRVTAIHFTPGSQVRQGEPLVQLYDDPERAQLASLQAKAVFAKSQLARSQ 126

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +          V ++          D          K+     +      ++ L +
Sbjct: 127 TLAPVGAEPRSVFDQHQFDYRSASADARQVEAVIRQKLVRAPFAGEIGIRQVNLGQ 182


>gi|332307723|ref|YP_004435574.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175052|gb|AEE24306.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 354

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 70/208 (33%), Gaps = 31/208 (14%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           +L EK    Q  +   +R       EL  N+ E K  L+ I+ L  ++            
Sbjct: 87  DLVEKG---QLLIKLSDREERARLNELDINLQEAKRQLKRIDNLAQKSVAS--------K 135

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           + L++ +       ++L + +   E+  + +P +G  +  +  S          +  +  
Sbjct: 136 QLLDEQEANVKALKAQLEVAKAQLEELELRAPFSGL-LGVRQVSLGALVMPGDLIATL-- 192

Query: 324 HSKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
              L  I+    +    +  V+KG   +     Y       F+  I  I   +      +
Sbjct: 193 -DDLHIIKMDFTIAESHLPSVRKGQQVSATSAAYPGET---FEGEISSIASRVDPVTRAI 248

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGF 409
           Q      +   I      + +++LR G 
Sbjct: 249 Q------IRAIID-----NKDLKLRPGM 265



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 40/99 (40%), Gaps = 4/99 (4%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I++  + ++G  + +G  L+   D E    ++   ++++  +  +      +D L  K  
Sbjct: 77  IVQSIEFDDGDLVEKGQLLIKLSDREERARLNELDINLQEAKRQLKR----IDNLAQKSV 132

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             ++  + +E  +     +     +++    + + +  L
Sbjct: 133 ASKQLLDEQEANVKALKAQLEVAKAQLEELELRAPFSGL 171


>gi|237836825|ref|XP_002367710.1| hypothetical protein TGME49_004380 [Toxoplasma gondii ME49]
 gi|211965374|gb|EEB00570.1| hypothetical protein TGME49_004380 [Toxoplasma gondii ME49]
          Length = 3085

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 69/216 (31%), Gaps = 3/216 (1%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
              + +    L  E       +      +  L+   + E++  D    + DV   A  +  
Sbjct: 1939 QMVGENETKLEHEREVHAQELARIAAELAGLQTVCERERAERDAERAEVDVQHSAQLAEA 1998

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
               L    +  +         +     +L+ +  + R     R   E  ++      ++ 
Sbjct: 1999 RARLADALREKAEEGAALRRALQEAEANLRRQ--QEREAEARRKHAEGLAAERGHREAAR 2056

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +   + K L EK A    ++ ++     +   E      E     R I EL  E   + 
Sbjct: 2057 DETERLRKELEEKCAALLREVEERGEERRRRESERDVERAEHAEKQRQICELR-ENEKKR 2115

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               ++E+ R + + +   A  + ++   E   + + 
Sbjct: 2116 QREVEELERRVSEQRAREAALLRQIENQEDQLQNQQ 2151



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 27/236 (11%), Positives = 71/236 (30%), Gaps = 24/236 (10%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFE 132
             +  +G  L         +L   ++   +  R H   +  E+   +   ++ + L K  E
Sbjct: 2008 EKAEEGAALRRALQEAEANLRRQQEREAEARRKHAEGLAAERGHREAARDETERLRKELE 2067

Query: 133  SREEQLLDFLGKYHSTCSKVF-------------NYGISSVYRSLKMKLTRMRSIYLNRL 179
             +   LL  + +      +                  I  +  + K +   +  +     
Sbjct: 2068 EKCAALLREVEERGEERRRRESERDVERAEHAEKQRQICELRENEKKRQREVEELERRVS 2127

Query: 180  DLENKSSLLRALLSSHQKDLTMMKNLFEKNA----VSQNDLNQQERIVYKSTLELRENIH 235
            +   + + L   + + +  L   ++L E+ A      Q +L + +R   +   E  E   
Sbjct: 2128 EQRAREAALLRQIENQEDQLQNQQSLLEEQAKLLVEQQEELLEMQRRCSQIESERGEKGS 2187

Query: 236  EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +                 + +      ++D   ++    D   + T  +   E+  
Sbjct: 2188 DDGGREPRDFGELPGQQTKESAERCNAAKDGNDDR----DRGERETERDAELERTE 2239


>gi|83646249|ref|YP_434684.1| membrane-fusion protein [Hahella chejuensis KCTC 2396]
 gi|83634292|gb|ABC30259.1| Membrane-fusion protein [Hahella chejuensis KCTC 2396]
          Length = 379

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 67/199 (33%), Gaps = 22/199 (11%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
              ELRE           +    + +     + L     + +  +       ++L     
Sbjct: 108 ERAELREAEVAADRAQLSLTRAKELSKTRNISQL-----EFDNAENDVKQAQARLNYNRA 162

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              +KT+ +P  G  +  +  S   +  +  P++ +   +   Y+   ++ +++  + +G
Sbjct: 163 VIAKKTLRAPFDGK-LGIRQISVGQFLNRGTPVVSLQSLN-PVYVEFSLSQRRLGELAEG 220

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
               V    Y    E+KF   I   +P I     N        V ++ T     +   +L
Sbjct: 221 LKVEVVTDAYP---EQKFVGKITAFNPDIDPNTRN--------VRVQAT---LDNPEGKL 266

Query: 406 RNGFPAEV-LFTAKNTTLA 423
           R G    + +  A+   + 
Sbjct: 267 RPGMFVAIEMILAQARDVL 285



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 49/143 (34%), Gaps = 4/143 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +K+ +   G+ +  G  L+ F+D       +L++  +   R  +   ++    L+   
Sbjct: 81  GTVKEIKFSAGADVKAGDVLVLFDDEIERA--ELREAEVAADRAQLSLTRA--KELSKTR 136

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           ++ +  F++ E  +     + +   + +    + + +             +LNR      
Sbjct: 137 NISQLEFDNAENDVKQAQARLNYNRAVIAKKTLRAPFDGKLGIRQISVGQFLNRGTPVVS 196

Query: 185 SSLLRALLSSHQKDLTMMKNLFE 207
              L  +          +  L E
Sbjct: 197 LQSLNPVYVEFSLSQRRLGELAE 219


>gi|78044152|ref|YP_358960.1| RND family efflux transporter MFP subunit [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996267|gb|ABB15166.1| efflux transporter, RND family, MFP subunit [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 393

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 69/232 (29%), Gaps = 21/232 (9%)

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           +   +   +  +E   + +++L  Q++ +     EL   I   +          +    +
Sbjct: 97  YSSQIEQAQIQYENAVLQRDELYAQKKDIEDKIKELDAQISSLEKSNNQDAAKLESLKQQ 156

Query: 255 FANYL--KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
             N            +N    A            + Q  I +  +G +           A
Sbjct: 157 RDNIQPVSIARIKQAENSVKLAKLTLDNAKKAAAQAQDKITADFSGVVTAVNVV-EGAMA 215

Query: 313 ---QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEK 369
              Q +  +M +          AK+       V  G    +R        +K +K  +  
Sbjct: 216 NSMQPAVTVMDL----SNLKAVAKLGRFDAAKVSLGQKVILR------NGKKSYKGEVSF 265

Query: 370 IDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
           I+P+ S        +    V +KI      D N +L+ GF  +      + T
Sbjct: 266 IEPVASTTMTASGQESTVGVEIKI-----LDKNPDLKVGFDVDADILIGSKT 312



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 42/101 (41%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +K+  V+ G ++ +G  L+TFE  + +  I+  ++  +N     D   +    + +K   
Sbjct: 72  VKRVYVKVGDRVKKGDVLVTFETQDYSSQIEQAQIQYENAVLQRDELYAQKKDIEDKIKE 131

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           L+    S E+       K  S   +  N    S+ R  + +
Sbjct: 132 LDAQISSLEKSNNQDAAKLESLKQQRDNIQPVSIARIKQAE 172


>gi|117924287|ref|YP_864904.1| RND family efflux transporter MFP subunit [Magnetococcus sp. MC-1]
 gi|117608043|gb|ABK43498.1| efflux transporter, RND family, MFP subunit [Magnetococcus sp.
           MC-1]
          Length = 361

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 60/198 (30%), Gaps = 14/198 (7%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                  E    + E +N    +  L+D+  +  A+ + +    L+  +       + LT
Sbjct: 94  QAQAGVSEAEARVVEARNEYNRLKSLFDQ-KMVTASQMDQAQGSLQAARARLNAAKAGLT 152

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
              +  +   + +P +G +   +       A   Q L   +   +   +   +  K    
Sbjct: 153 SASEGVDDTVLRAPYSGYVTQ-RFVQLGENASVGQRLFTGISLDE-LRVITNIPQKYADV 210

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
           V+   +A V        + ++       + P+       +       V +K+ +      
Sbjct: 211 VRVTRSALVEISSSLAQQVRRIPVKDVVVFPVADPASRTVG------VRIKLPEGIQG-- 262

Query: 402 NIELRNGFPAEVLFTAKN 419
              +  G   +V F    
Sbjct: 263 ---IYPGMLVKVFFVIGQ 277


>gi|330448850|ref|ZP_08312495.1| M repeat family protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328493041|dbj|GAA06992.1| M repeat family protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 319

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 75/204 (36%), Gaps = 5/204 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHSTCSKV 152
           + ++ + + +  R + +  + A +      D LE+A +   ++  LL+   K        
Sbjct: 79  MAEITRHATEAERRYREIAEDAKEQSLLAIDDLERAEDRLYKQTALLEQREKQIKEVEAE 138

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                 S     +    ++ ++     +    +  LR  L+ ++  L   K L       
Sbjct: 139 LAQADKSQQAITQELRQQIENLTEQLNESTASNERLRTELAKNELLLESNKELVVSTKTQ 198

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLKEISRDLEQN 269
             +LN Q + +    +EL + I   ++      EL +E   + L      +++ RDL   
Sbjct: 199 NTELNDQIKQLNGEVVELSKTITRLESAQESKQELIEELKASKLSVQEQNQQLDRDLRDT 258

Query: 270 QRTFADEMSKLTILEKTREQKTIL 293
           Q+  +   + L+  + +    T  
Sbjct: 259 QQERSTLQASLSDAKASLSTNTQR 282


>gi|317485662|ref|ZP_07944534.1| hypothetical protein HMPREF0179_01887 [Bilophila wadsworthia 3_1_6]
 gi|316923096|gb|EFV44310.1| hypothetical protein HMPREF0179_01887 [Bilophila wadsworthia 3_1_6]
          Length = 199

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 67/206 (32%), Gaps = 23/206 (11%)

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  +        +    ++    +E  L+      E+ R  E        E+ ++ +L +
Sbjct: 1   TQADRDAASSAYRAAQANVAAAQEELALKKEGSRPEVIRAAEAQVMQAQAELDEINVLCQ 60

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 I SP+ G +V  +  S+       Q L  +V      ++ A++   +I  ++ G
Sbjct: 61  D---SVIPSPVNG-VVAQKLVSAGELVAAGQKLFTLVNTDD-IWLNARIEETRIGQIRVG 115

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKIT--- 394
                    Y       F   I +I+P        I ++      T+    V +KI+   
Sbjct: 116 QDVAFTIDGYPGRT---FSGRIYEINPAACSVFSLISTENVAGYFTKIMQRVPVKISLPR 172

Query: 395 ----DLAFSDNNIELRNGFPAEVLFT 416
               +    +  +  R G    +   
Sbjct: 173 LDSPETDPGEPEVVFRIGMQGTIEIQ 198


>gi|240138986|ref|YP_002963461.1| Peptidase, M50 family protein [Methylobacterium extorquens AM1]
 gi|240008958|gb|ACS40184.1| Peptidase, M50 family protein [Methylobacterium extorquens AM1]
          Length = 715

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 50/143 (34%), Gaps = 4/143 (2%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
               R   L+      ++    ++P+  +  + G +   D+   I++   GI+    VE 
Sbjct: 422 RRRSRAVTLTSAATGAVLALLFVVPLPYTTMAQGVVWAPDDTQ-IRTKTDGILTTLLVEP 480

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
           G     G  L T ED      + + +  +  LR   D  +        +  +L++   S 
Sbjct: 481 GRDAQAGEALATLEDPSLDSRVAVLEAQLAELRLRYDAARLG---DRVQAQILQEQIAST 537

Query: 135 EEQLLDFLGKYHSTCSKVFNYGI 157
           +E L  +  +      +    G 
Sbjct: 538 QEILRVYRERQAGLIVRASQAGR 560


>gi|184158019|ref|YP_001846358.1| membrane-fusion protein [Acinetobacter baumannii ACICU]
 gi|332874479|ref|ZP_08442382.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6014059]
 gi|183209613|gb|ACC57011.1| Membrane-fusion protein [Acinetobacter baumannii ACICU]
 gi|322508338|gb|ADX03792.1| Secretion protein HlyD [Acinetobacter baumannii 1656-2]
 gi|323517961|gb|ADX92342.1| membrane-fusion protein [Acinetobacter baumannii TCDC-AB0715]
 gi|332737323|gb|EGJ68247.1| auxiliary transport protein, membrane fusion protein family protein
           [Acinetobacter baumannii 6014059]
          Length = 340

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/350 (13%), Positives = 109/350 (31%), Gaps = 37/350 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSIL--LPIEISVSSS-GEILNEDNVVEIKSPF-SGIIKKFQV 72
           +  + ++  +  IG   W       ++ +V +  G +          +   SG I+K  V
Sbjct: 6   IAGILVVIAVVAIGFWVWGYNHKKQLDNNVLTLYGNVDI---RQVSLAFEQSGRIQKLLV 62

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
           + G ++  G  L T             +  +K  +  I         +  +     +   
Sbjct: 63  QEGDKVQAGQVLATLNTNALQIQAKQAQAQLKAQQEAI---------VKQEVGARPEEIT 113

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             + QL     +   T   +    +  +  S   +    + +   + +  +  + +R   
Sbjct: 114 QAKAQLASAQAELDKTNKNL--QRLQILVSSTDGRAISQQELDYAKSNQHSAEAAVRERQ 171

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK---STLELRENIHEQKNMLRHINELYD 249
           ++ +  +   +    +   +Q ++ +    +     +  ELR  ++    +   + E+ D
Sbjct: 172 ANLELLIKGARKEDREATRAQYEVTKANLDLINYNLTQAELRSPVNAV--VRARLQEVGD 229

Query: 250 EANLEFANY-LKEISRDLEQNQRTFADEMS-KLTILEKTREQKTILSPIAGTIVYNQS-- 305
               + A Y L   +    +      D  S K+    +         P+ G I Y  S  
Sbjct: 230 MTTAQKAVYTLALTNPKWIRVYVNEQDLSSIKMGDTAQVIRDAYPNQPMNGKIGYISSVA 289

Query: 306 -FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-QHVKKGYTATVRFP 353
            F+      Q++ +              +V        +K G   TV  P
Sbjct: 290 EFTPKTV--QTEEI------RTTLVYEVRVYVHDPNDQLKMGQPVTVNVP 331



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 85/241 (35%), Gaps = 25/241 (10%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK---NAVSQNDLNQQERIVYKSTLELRE 232
                 + + +  +A L    K+L  ++ L       A+SQ +L+  +   + +   +RE
Sbjct: 110 EEITQAKAQLASAQAELDKTNKNLQRLQILVSSTDGRAISQQELDYAKSNQHSAEAAVRE 169

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                + +++   +   EA                  +  +    + L ++     Q  +
Sbjct: 170 RQANLELLIKGARKEDREA-----------------TRAQYEVTKANLDLINYNLTQAEL 212

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            SP+   +V  +     +    +Q  +  +  +   +IR  V  + +  +K G TA V  
Sbjct: 213 RSPVNA-VVRARLQEVGD-MTTAQKAVYTLALTNPKWIRVYVNEQDLSSIKMGDTAQVIR 270

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
             Y +         I  I  +       +QT+E    ++    +   D N +L+ G P  
Sbjct: 271 DAYPNQ---PMNGKIGYISSVAEFTPKTVQTEEIRTTLVYEVRVYVHDPNDQLKMGQPVT 327

Query: 413 V 413
           V
Sbjct: 328 V 328


>gi|167824548|ref|ZP_02456019.1| putative multidrug resistance protein [Burkholderia pseudomallei 9]
          Length = 367

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/198 (10%), Positives = 66/198 (33%), Gaps = 4/198 (2%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  + ++ ++ ++G   W          +       + N + I    SG +
Sbjct: 21  ERKRPGKKPLVVLAIIVVLLLVGAFVW-WFATRNQVSTDDAY--TDGNAITIAPKVSGYV 77

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               +++   + +G  LL  +  +    +D  +  +   +  +D  +  LD  + ++   
Sbjct: 78  VALAIDDNVYVHRGDLLLVIDQRDYQAQVDAARAQLGLAQAQLDAAQVQLDIAHVQFPAQ 137

Query: 128 -EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             +A    E     F     +   +      ++  +++ +   +  +   N      ++ 
Sbjct: 138 YRQAQAQIEAAQASFRQALAAYERQHAVDARATSQQAIDVADAQRLTADANVATTRAQAR 197

Query: 187 LLRALLSSHQKDLTMMKN 204
               +    ++  T ++ 
Sbjct: 198 TASLVPQQIRQAQTAVEQ 215


>gi|163759385|ref|ZP_02166471.1| Multidrug resistance efflux pump-like protein [Hoeflea
           phototrophica DFL-43]
 gi|162283789|gb|EDQ34074.1| Multidrug resistance efflux pump-like protein [Hoeflea
           phototrophica DFL-43]
          Length = 419

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 86/312 (27%), Gaps = 81/312 (25%)

Query: 44  VSSSGEILNEDNVVEIKSPFSG---IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           V + G +     VV +  P       + +  V  G  + +G  L   + ++         
Sbjct: 105 VVALGRLQPSGGVVSVALPQGAGDARLDQLLVTEGEIVAEGDVLAVLDSLQ--------- 155

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                                    + E A  S E  L         T  +V        
Sbjct: 156 -------------------------LYESALTSAESTLAIRRAALAQTRVQV-------- 182

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
                            + +L  +     A LS+ +++L  +++L E+   +Q  L    
Sbjct: 183 --------------AATQAELRAQIRGAEATLSASERELARVRSLIERGVATQATLEAAI 228

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +    +  +L      Q       +                   D+       A   + +
Sbjct: 229 QANDNAQADLDRLQASQLRYQPGPDGEQV---------------DIALASADLAAAKAAV 273

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI- 339
                  ++  + +P  GTIV   + +       S  L+++        + A++   QI 
Sbjct: 274 EQARSDLDRARVFAPRDGTIVEVAART--GERPPSDGLLQM---GDTAQMEAELEVFQIM 328

Query: 340 -QHVKKGYTATV 350
              +  G   ++
Sbjct: 329 APRIAVGQDVSL 340


>gi|1408192|gb|AAB03660.1| myosin heavy chain [Placopecten magellanicus]
          Length = 1941

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 74/193 (38%), Gaps = 15/193 (7%)

Query: 100  KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            +  + +L   ++  + +++ L ++   L+        QL D              + +S 
Sbjct: 1253 ESQVSDLNARLEDSQRSINELQSQKSRLQAENSDLSRQLEDA------------EHRVSV 1300

Query: 160  VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            + +      +++     +  D     + L+  + +   D+   +   E+   S++D+   
Sbjct: 1301 LSKEKSQLTSQLEDARRSLEDETRARTKLQNEIRNMHADMDAAREQLEEEQESKSDV--- 1357

Query: 220  ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            +R + K+  E+++   + ++   +  E  ++   +    L E  +++E      +     
Sbjct: 1358 QRQLSKANNEIQQWRSKFESEGANRTEELEDQKRKILGKLSEAEQNMEAANAKASALDKA 1417

Query: 280  LTILEKTREQKTI 292
             + L++  E  +I
Sbjct: 1418 KSRLQQELEDLSI 1430



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 68/209 (32%), Gaps = 12/209 (5%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +        +++ +  +  E S L       +         + QL   L     +     
Sbjct: 1264 EDSQRSINELQSQKSRLQAENSDLSRQLEDAEHRVSVLSKEKSQLTSQLEDARRSLEDET 1323

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-KNAVS 212
                + +   ++     M +      + +   S ++  LS    ++   ++ FE + A  
Sbjct: 1324 RAR-TKLQNEIRNMHADMDAAREQLEEEQESKSDVQRQLSKANNEIQQWRSKFESEGANR 1382

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR------DL 266
              +L  Q+R +     E  +N+         +++       E  +   E+ R       +
Sbjct: 1383 TEELEDQKRKILGKLSEAEQNMEAANAKASALDKAKSRLQQELEDLSIEVDRANANVNQM 1442

Query: 267  EQNQR----TFADEMSKLTILEKTREQKT 291
            E+ QR    T ++  SK+  L+   E   
Sbjct: 1443 EKKQRAFDKTTSEWQSKVNSLQSELENSQ 1471



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 60/182 (32%), Gaps = 5/182 (2%)

Query: 110  IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            +  E+   + LN     LE+A +  E+ L     +             S V + LK    
Sbjct: 1010 LQAEEDKCNHLNKLKAKLEQALDELEDNL-----EREKKVRGDVEKAKSKVEQDLKSTQE 1064

Query: 170  RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
             +  +   + +LE       A +++    L   +NL  +      +L  +   + +    
Sbjct: 1065 NVEDLERVKRELEENVRRKEAEITTLNSKLEDEQNLVSQLQRKIKELQARIEELEEELEA 1124

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             R    + +     +N   +E            S  +E N++  A+ +     LE+   Q
Sbjct: 1125 ERNARSKVEKQRAELNRELEELGERLDEAGGATSAQIELNKKREAELLKIRRDLEEASLQ 1184

Query: 290  KT 291
              
Sbjct: 1185 HE 1186



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 71/238 (29%), Gaps = 37/238 (15%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E    +   +  I+ ++  I+ E+   D     Y++ E+       ++ +          
Sbjct: 1638 EMEKTVKRYQQQIREMQTSIEEEQRQRDEARESYNMAERRCTLMSGEVEELRAALEQAER 1697

Query: 151  --KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              K     ++     +    +++ S+   +  LE   + ++  L     +L       +K
Sbjct: 1698 ARKGSENELADANDRVNELTSQVSSVQGQKRKLEGDINAMQTDLDEMHGELKGADERCKK 1757

Query: 209  NAVSQNDL---NQQERIVYKSTLELRENIHEQ-------------------KNMLRHINE 246
                   L    + E+       ++R+N+  Q                   K +++ +  
Sbjct: 1758 AMADAARLADELRAEQDHSNQVEKVRKNLESQVKEFQIRLDEAEASSLKGGKKLIQKLES 1817

Query: 247  LYDEANLEFANYLK---EISRDLEQNQRTFADE----------MSKLTILEKTREQKT 291
               E   E  N  +   E  +++ +  R   +             +L  L      K 
Sbjct: 1818 RVHELEAELDNEQRRHAETQKNMRKADRRLKELAFQADEDRKNQERLQELIDKLNAKI 1875


>gi|24375664|ref|NP_719707.1| hypothetical protein SO_4178 [Shewanella oneidensis MR-1]
 gi|24350582|gb|AAN57151.1|AE015850_3 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 351

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 97/269 (36%), Gaps = 11/269 (4%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +   KR        + L  +I  + ++ W +L P  + + +SG  +     +E+++P +G
Sbjct: 24  YAAAKRGGFKGRWYLLLTLVIAPVVVVGWILLRP-HLFILASG--IVTTEPLEVRAPSAG 80

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +    V+ G  +  G  +LT  D +    I   +  +  L     +  + +     +  
Sbjct: 81  DVAAIMVKRGDVLASGANILTLVDTQLGAQIQELEKQLSQLEFDHLSLNAEILTQLQQRI 140

Query: 126 VLEKAFESREEQLLDFLGKYH-------STCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +     +R++ LLD   +Y        +  + V     +S     + K+  M++    +
Sbjct: 141 AVAAEGVTRQDGLLDSFERYQRQGVVPTADMAAVLQAHTASKMALEQAKVDLMQARQGQK 200

Query: 179 LD-LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            + L    +  +  +      L   ++     A++   +      V +  +E R  +   
Sbjct: 201 TELLAGAIAQSKYNIELQLARLKAQESQLHIKALNPTRVVDVLVQVGEHIVEDRPLVLLS 260

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDL 266
                 I    +   LE+ N  ++ +  L
Sbjct: 261 GREAAVIFAYLEPKYLEYTNIGQKATIKL 289



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 28/255 (10%), Positives = 84/255 (32%), Gaps = 26/255 (10%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           LR H+    S +  +  +   +          ++   G   ++ + +     + +   ++
Sbjct: 55  LRPHLFILASGI--VTTEPLEVRAPSAGDVAAIMVKRGDVLASGANILTLVDTQLGAQIQ 112

Query: 166 MKLTRMRSIYLNRLDLENKS-SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
               ++  +  + L L  +  + L+  ++   + +T    L +          + +R   
Sbjct: 113 ELEKQLSQLEFDHLSLNAEILTQLQQRIAVAAEGVTRQDGLLDS-------FERYQRQGV 165

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR-DLEQNQRTFADEMSKLTIL 283
             T ++   +         + +   +          E+    + Q++     ++++L   
Sbjct: 166 VPTADMAAVLQAHTASKMALEQAKVDLMQARQGQKTELLAGAIAQSKYNIELQLARLKAQ 225

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH-----SKLTYIRAKVTPKQ 338
           E       I +     +V           Q  + +++  P       +   I A + PK 
Sbjct: 226 ESQL---HIKALNPTRVVDVL-------VQVGEHIVEDRPLVLLSGREAAVIFAYLEPKY 275

Query: 339 IQHVKKGYTATVRFP 353
           +++   G  AT++ P
Sbjct: 276 LEYTNIGQKATIKLP 290


>gi|89892918|ref|YP_516405.1| hypothetical protein DSY0172 [Desulfitobacterium hafniense Y51]
 gi|89332366|dbj|BAE81961.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 312

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 41/116 (35%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W +L  I   +   G +LN   V  ++    G I   +V+ G ++ QG  +   E  E
Sbjct: 46  VVWGLLGSIPTKIQGQGILLNNGGVFSLQHHAPGQISDIRVKVGQEVRQGDVIARIEQPE 105

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
               I     S   +       + AL  +  +   L      R + + +  G+   
Sbjct: 106 LVAQIKGLLGSQAAMDKDGQGGEPALAGIEEQIRQLRSELVYRTQVVSEVDGRILE 161



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/159 (10%), Positives = 49/159 (30%), Gaps = 8/159 (5%)

Query: 219 QERIVYKSTLELRENIHE---QKNMLRHINELYDEANLE-FANYLKEISRDLEQNQRTFA 274
            +        ++R  + +   Q +++  I +    A ++        + +D +  +   A
Sbjct: 73  LQHHAPGQISDIRVKVGQEVRQGDVIARIEQPELVAQIKGLLGSQAAMDKDGQGGEPALA 132

Query: 275 DEMSKLTILEKTRE-QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA- 332
               ++  L      +  ++S + G I+     S  +  +    L  +  +     + A 
Sbjct: 133 GIEEQIRQLRSELVYRTQVVSEVDGRILELNI-SKGSIVKPGDTLATLEQYGDTVKLEAI 191

Query: 333 -KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             V  +Q   ++ G    +                +  +
Sbjct: 192 VYVPAEQGGLLRPGMECQISPTTVNKEEYGYLLGRVNTV 230


>gi|41529157|dbj|BAD08419.1| putative a-helix coiled-coil rod homologue [Sus scrofa]
          Length = 347

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 78/205 (38%), Gaps = 5/205 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              ++L+   ++  R  +D E      +  +     +     E Q L  + +      + 
Sbjct: 67  ATEMNLELEQLREERNRLDAELQLSAHIIQQEVGRAREQGEVERQKLSEVAQQLEQELQR 126

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNA 210
               ++S+   L+      +        L  + +  + +   +  +K   +   L E+ +
Sbjct: 127 TQESLASLGLQLEAARQGQQESTAEAAGLRQELTQQQEIYGQALQEKVAEVETRLREQLS 186

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNML---RHINELYDEANLEFANYLKEISRDLE 267
            S+  LN+  R   K+ + LR+   +        + +  L +EA  E    L +  ++LE
Sbjct: 187 ESERRLNEARREHTKAVVSLRQMQRKATREKERNQELRRLQEEARKEEGQRLTQRLKELE 246

Query: 268 QNQRTFADEMSKLTILEKTREQKTI 292
           +++      + +  +L + ++Q+ +
Sbjct: 247 RDKNLMLATLQQEGLLSRYKQQRLL 271



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 59/205 (28%), Gaps = 1/205 (0%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
                +       ++KV             + L   +              EQL +   +
Sbjct: 24  ARLPSLSARLSYAVRKVHTIRGLMARKLALAQLRQESCPPPPPATEMNLELEQLREERNR 83

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +      +     V R+ +      + +      LE +    +  L+S    L   + 
Sbjct: 84  LDAELQLSAHIIQQEVGRAREQGEVERQKLSEVAQQLEQELQRTQESLASLGLQLEAARQ 143

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             +++      L Q+     +   + L+E + E +  LR      +    E      +  
Sbjct: 144 GQQESTAEAAGLRQELTQQQEIYGQALQEKVAEVETRLREQLSESERRLNEARREHTKAV 203

Query: 264 RDLEQNQRTFADEMSKLTILEKTRE 288
             L Q QR    E  +   L + +E
Sbjct: 204 VSLRQMQRKATREKERNQELRRLQE 228



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/201 (8%), Positives = 55/201 (27%), Gaps = 3/201 (1%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           T   ++     + +L   +      +  +           + R+E               
Sbjct: 15  TMAEVERATARLPSLSARLSYAVRKVHTIRGLMARKLALAQLRQESCPPPPPATEMNLEL 74

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK---NLFEK 208
                  +   +       +    + R   + +    +    + Q +  + +   +L   
Sbjct: 75  EQLREERNRLDAELQLSAHIIQQEVGRAREQGEVERQKLSEVAQQLEQELQRTQESLASL 134

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
               +     Q+    ++    +E   +Q+   + + E   E        L E  R L +
Sbjct: 135 GLQLEAARQGQQESTAEAAGLRQELTQQQEIYGQALQEKVAEVETRLREQLSESERRLNE 194

Query: 269 NQRTFADEMSKLTILEKTREQ 289
            +R     +  L  +++   +
Sbjct: 195 ARREHTKAVVSLRQMQRKATR 215


>gi|319788077|ref|YP_004147552.1| efflux transporter RND family, MFP subunit [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317466589|gb|ADV28321.1| efflux transporter, RND family, MFP subunit [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 424

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 73/220 (33%), Gaps = 8/220 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +S+ G+++   N   + +   G +   +V  G  + +G  L   +  E    +  ++ ++
Sbjct: 72  ISADGKVI-TANSPVLYAIAGGTVS-LKVVAGDVVEKGQVLAVIDSPELHSKLVQEESTL 129

Query: 104 KNLRCHIDTEK--SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            ++       +  + +  LN +    +   +    Q      +       V N  ++   
Sbjct: 130 ASMEAEASRAQLDARIASLNARKARDQALIDHTAAQRDLERYERAHAGGAVSNNELARAQ 189

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             LK     + +   +   L+ + + L A    +++ L   +         Q DL     
Sbjct: 190 DELKKARIGLEA-ARSDAGLQEQGAALDA---RNKRLLADRQKAVVDELRRQVDLLTLRA 245

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
                  +++ +      +   I  + D +  E    + E
Sbjct: 246 PFDGQVGQVQVSQGTNVAINAPILGVVDLSEFEVEIRVPE 285



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 78/225 (34%), Gaps = 21/225 (9%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            L  KL +  S   + ++ E   + L A ++S        + L + +  +Q DL + ER 
Sbjct: 117 ELHSKLVQEESTLAS-MEAEASRAQLDARIASLNARKARDQALID-HTAAQRDLERYERA 174

Query: 223 VYK---STLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS--RDLEQNQRTFADEM 277
                 S  EL     E K     +     +A L+      +    R L   Q+   DE+
Sbjct: 175 HAGGAVSNNELARAQDELKKARIGLEAARSDAGLQEQGAALDARNKRLLADRQKAVVDEL 234

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
            +        +  T+ +P  G +   Q  S       + P++ +V       +  +V   
Sbjct: 235 RR------QVDLLTLRAPFDGQVGQVQV-SQGTNVAINAPILGVV-DLSEFEVEIRVPES 286

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
             + +  G  A V        + K + A +  + P +   +   +
Sbjct: 287 FARDLGIGVPAQV------TSQGKAWPAKVSAVSPEVVNGEVTAR 325


>gi|294670151|ref|ZP_06735076.1| transcriptional regulator, GntR family [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308078|gb|EFE49321.1| transcriptional regulator, GntR family [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 1161

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 73/200 (36%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  ++   +  +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQAQQQSVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +++    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQMQRIHQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|285017500|ref|YP_003375211.1| membrane fusion protein [Xanthomonas albilineans GPE PC73]
 gi|283472718|emb|CBA15223.1| probable membrane fusion protein [Xanthomonas albilineans]
          Length = 418

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/150 (10%), Positives = 50/150 (33%), Gaps = 11/150 (7%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL---------- 95
           ++G ++       + +  +G +++  +E G ++ +G  L   + I               
Sbjct: 77  ATGYVIA-RRTATVSAQITGRVEEVMIEEGQRVEEGQILARLDPINADAERSLAQSQLSA 135

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
              +  +++      + E   L+FL  +  V    ++ +  +      +  +    V   
Sbjct: 136 SQSQVQNVQAQLTRAEAEAKRLEFLAKQQLVSRSQYDQQVAERDALRAQLETARRNVQVA 195

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                  ++    T +R+ +   +  +   
Sbjct: 196 RDQLKLSTIGKDYTVVRAPFAGVITAKAAQ 225



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/323 (10%), Positives = 82/323 (25%), Gaps = 60/323 (18%)

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +V    +       ++A   L+    V+ +   +   Q+   + +      +    G  
Sbjct: 54  LEVRTATVTAMGGNNRAAASVLDATGYVIARRTATVSAQITGRVEEVMIEEGQRVEEGQI 113

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                                  +++   ++A L+  + +   ++ L ++  VS++  +Q
Sbjct: 114 LARLDPINADAERSLAQSQLSASQSQVQNVQAQLTRAEAEAKRLEFLAKQQLVSRSQYDQ 173

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           Q                                          +   LE  +R       
Sbjct: 174 QVAE------------------------------------RDALRAQLETARRNVQVARD 197

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--------LMKIVPHSKLTYI 330
           +L +    ++   + +P AG I   ++                    +  IV       +
Sbjct: 198 QLKLSTIGKDYTVVRAPFAGVITA-KAAQPGEIVSPLSAGGGFTRTGIGTIV-DMDSLEV 255

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V    I  V+           Y D +     A +  + P   +            V 
Sbjct: 256 EVDVGEAYIGRVQPRMPVEATLNAYPDWK---IPAEVIAVIPTADRGKAT--------VK 304

Query: 391 LKITDLAFSDNNIELRNGFPAEV 413
           ++I   A    +  +       V
Sbjct: 305 VRI---ALKSKDPRIVPEMGVNV 324


>gi|283780862|ref|YP_003371617.1| ABC transporter membrane protein [Pirellula staleyi DSM 6068]
 gi|283439315|gb|ADB17757.1| ABC exporter membrane fusion protein, DevB family [Pirellula
           staleyi DSM 6068]
          Length = 349

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/298 (10%), Positives = 88/298 (29%), Gaps = 26/298 (8%)

Query: 44  VSSSGEILNEDNVVEIKSP---FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           + + G +     ++ I +P       I+K  VE G  + +G  L   ++         ++
Sbjct: 45  IHALGRLEPRGRLLRIHAPSGNEGACIEKLLVEEGQDVEEGEVLAVLDN--------HQR 96

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                +        +     + K    +    ++   +     +   +  ++        
Sbjct: 97  RKAAAIEAEAQVRTAEAKLADIKAGAKQGEIAAQRAMVKLTESQKLYSQRQLDRARQLRD 156

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +L  +         NR++LE++   L  L S  +   T ++    +  ++        
Sbjct: 157 SNALSNEEFENTEWAFNRVNLEHQQQ-LERLASVMEVRATDVQ--VAEQEIAVARAAVVS 213

Query: 221 RIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFAN--YLKEISRDLEQNQRTFADEM 277
                +  E+R  I      +     E   E            +   ++ +         
Sbjct: 214 AQANLAVTEIRAPITGRILALHCRTGERLSENGFAQIGNVQQMQAVAEVYEADLQRVKVG 273

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            + T+L ++  +      + G +V   +  +      + P    V  +    +  +V 
Sbjct: 274 CRATVLVESTGET-----LEGVVVELGNLVARKVVLTNDP----VSDTDARVVEVRVQ 322



 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 95/301 (31%), Gaps = 31/301 (10%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++E+  +  E ++L  L  +    +              K+   +  +            
Sbjct: 75  LVEEGQDVEEGEVLAVLDNHQRRKAAAIEAEAQVRTAEAKLADIKAGAKQGEIAAQRAMV 134

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            L  +     Q+ L   + L + NA+S  +    E    +  LE ++ +           
Sbjct: 135 KLTESQKLYSQRQLDRARQLRDSNALSNEEFENTEWAFNRVNLEHQQQLE---------- 184

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                     A+ ++  + D++  ++  A   + +   +       I +PI G I+    
Sbjct: 185 --------RLASVMEVRATDVQVAEQEIAVARAAVVSAQANLAVTEIRAPITGRILALHC 236

Query: 306 FS-----SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
            +      + +AQ          + +     A+V    +Q VK G  ATV      +  E
Sbjct: 237 RTGERLSENGFAQIG--------NVQQMQAVAEVYEADLQRVKVGCRATVLVESTGETLE 288

Query: 361 KKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                +   +   +   ++ +   +   V +++     +   +E  +    +V       
Sbjct: 289 GVVVELGNLVARKVVLTNDPVSDTDARVVEVRVQLSQAASQKVERLSNARVQVHIELPPR 348

Query: 421 T 421
           +
Sbjct: 349 S 349


>gi|261322857|ref|ZP_05962054.1| efflux transporter [Brucella neotomae 5K33]
 gi|261298837|gb|EEY02334.1| efflux transporter [Brucella neotomae 5K33]
          Length = 351

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 115 RIDDVEQRANMRVAQASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 174

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 175 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 233

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 234 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 281



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 76  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 128

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + S+      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 129 QASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 188

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 189 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 245

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 246 IGMGVTVALLADPSIEAEGNIRELS 270


>gi|168700440|ref|ZP_02732717.1| hypothetical protein GobsU_12992 [Gemmata obscuriglobus UQM 2246]
          Length = 1288

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 67/208 (32%), Gaps = 8/208 (3%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST--C 149
             D  + ++   ++    ++   +AL+       V  +    R +QL     ++  T   
Sbjct: 354 ARDEFEAERARFQDDLARLERRTAALEAAERAVAVRTQEVNVRLDQLKRDATEWEETVGL 413

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +      + S    L  + T + +      +   +    +A+++  +  L   +   E+ 
Sbjct: 414 AAAEQERLRSEAERLDHQRTELDAQSAALAERAAQLEAQQAVVAVFRAKLDRSRQDMERE 473

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQ---KNMLRHINELYDEANLEFANYLKEISRDL 266
           A     L         +  ELR  I E    +  L  + E  D+           ++  L
Sbjct: 474 A---WQLAAARTREDDALAELRRRIQEAEEVRAALSAVQENADQERRRLDERDSLLAAGL 530

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILS 294
           E+ +       ++   L     +  + S
Sbjct: 531 EEIRVQKEQLAAEAKRLRDREAELDVRS 558



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/227 (9%), Positives = 66/227 (29%), Gaps = 15/227 (6%)

Query: 78  ILQGTPLLTFEDIETTD---LIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEK 129
           +      +  + ++         +   + +  R   + E     ++ LD  +        
Sbjct: 388 VRTQEVNVRLDQLKRDATEWEETVGLAAAEQERLRSEAERLDHQRTELDAQSAALAERAA 447

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
             E+++  +  F  K   +   +      +++        L  +R       ++    S 
Sbjct: 448 QLEAQQAVVAVFRAKLDRSRQDMEREAWQLAAARTREDDALAELRRRIQEAEEVRAALSA 507

Query: 188 LRALLSSHQKDLTMMKNLFEKNA----VSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           ++      ++ L    +L         V +  L  + + +     EL     E       
Sbjct: 508 VQENADQERRRLDERDSLLAAGLEEIRVQKEQLAAEAKRLRDREAELDVRSAEFAEQAGM 567

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           +     +A ++    L+     L + +   +        L++   ++
Sbjct: 568 LKGRMSQA-VDLQGRLETDRVALREREAALSQSEEARQALQEQLRRR 613


>gi|167590138|ref|ZP_02382526.1| Secretion protein, HlyD family [Burkholderia ubonensis Bu]
          Length = 487

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 62/203 (30%), Gaps = 22/203 (10%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL- 283
           +S L   E       +     +   +  +      ++    L + +    +   KL  L 
Sbjct: 229 RSELLTAERRLSAARITYEREKTLWQERISAEQDYQQAQVQLREAEIAAQNARQKLAALN 288

Query: 284 ----EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
                +   +  + +P AGT+V   + +       +   M +V      +    V  +++
Sbjct: 289 APAGARALNRYELRAPFAGTVVEKHA-TPGEAI-AADASMFVVSDLSSVWAEMAVPAQRL 346

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
             V+ G  ATV    +              +  ++ +Q           V+L   D A+ 
Sbjct: 347 NDVRVGRDATVSAAAFESRSSGPIA----YVGALLGEQTRTAPA----RVVLPNPDGAW- 397

Query: 400 DNNIELRNGFPAEVLFTAKNTTL 422
                 R G    V   A   ++
Sbjct: 398 ------RPGLFVNVSVDAGRQSV 414



 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 19/186 (10%), Positives = 64/186 (34%), Gaps = 4/186 (2%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI+++  V  G  + +G  L      +  D       + + L     T +        + 
Sbjct: 198 GIVEQVAVSLGQNVAKGQVLAVIASTDLADRRSELLTAERRLSAARITYEREKTLWQERI 257

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   + ++ Q+     +  +  ++     +++   +  +    +R+ +   +  ++ 
Sbjct: 258 SAEQ---DYQQAQVQLREAEIAAQNARQKLAALNAPAGARALNRYELRAPFAGTVVEKHA 314

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
           +        +    ++ + +++ + AV    LN   R+   +T+            + ++
Sbjct: 315 TPGEAIAADASMFVVSDLSSVWAEMAVPAQRLNDV-RVGRDATVSAAAFESRSSGPIAYV 373

Query: 245 NELYDE 250
             L  E
Sbjct: 374 GALLGE 379


>gi|167588697|ref|ZP_02381085.1| secretion protein HlyD family protein [Burkholderia ubonensis Bu]
          Length = 342

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 100/342 (29%), Gaps = 28/342 (8%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           D  +  +   R       + L  L     V E     R           H    +V    
Sbjct: 7   DTPRAPLARSRRRTIALIAVLALLLVALLVYEFDARDRGTDDAYVTSHLHVISPRVAGAV 66

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
              +    +        + ++R D + + +L RA ++    D T      E+   +   L
Sbjct: 67  ERVLVDDNQFVRAGAPLVQIDRRDFDVRVALQRARVAQAHADATRAHAAVEQ---ADATL 123

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF--- 273
                   K+ L+        +   R +++   +A               +  +R+    
Sbjct: 124 VSARADAEKADLDYARARELTRETPRGLSKQEFDAADAARKSAHARIAAADAQRRSALAA 183

Query: 274 --------ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
                   +   + L       +  T+++P  G +   ++  +  +    Q L+ +V   
Sbjct: 184 LQAADAVSSQNDAALRDALLQLQYTTVVAPSDGYV-GKKTVETGEHVAPGQALLTLV-AP 241

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNL 381
               + A     Q++HV+ G    +RF    D     F   I+ + P    Q      + 
Sbjct: 242 HPWIV-ANFRETQLRHVRTGDAVRLRFDALPDRT---FTGRIDSLSPATGAQFALLPPDN 297

Query: 382 QTQEYYEVILKITDLAFSDNNI----ELRNGFPAEVLFTAKN 419
            T  + +V  ++      D        +R G    V      
Sbjct: 298 ATGNFTKVTQRVPVKILLDGPAATEPRIRPGLSVVVTLQRGR 339



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 53/156 (33%), Gaps = 7/156 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL----- 106
              ++  I    +G +++  V++   +  G PL+  +  +    + L++  +        
Sbjct: 51  VTSHLHVISPRVAGAVERVLVDDNQFVRAGAPLVQIDRRDFDVRVALQRARVAQAHADAT 110

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFE-SREEQLLDFLGKYHSTCS-KVFNYGISSVYRSL 164
           R H   E++    ++ + D  +   + +R  +L     +  S       +    S +  +
Sbjct: 111 RAHAAVEQADATLVSARADAEKADLDYARARELTRETPRGLSKQEFDAADAARKSAHARI 170

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                + RS        +  SS   A L      L 
Sbjct: 171 AAADAQRRSALAALQAADAVSSQNDAALRDALLQLQ 206


>gi|161502717|ref|YP_001569829.1| multidrug efflux system subunit MdtA [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864064|gb|ABX20687.1| hypothetical protein SARI_00766 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 444

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 46/138 (33%), Gaps = 5/138 (3%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             G +    N V ++S   G +     + G Q+  G  L   +  +    +   +  +  
Sbjct: 108 GLGTVTAA-NTVTVRSRVDGQLIALHFQEGQQVNAGDLLAQIDPSQFKVALAQAQGQLAK 166

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
               +   +  L     +Y  L K+     ++L     + +     +     +     L+
Sbjct: 167 DNATLANARRDL----ARYQQLAKSNLVSRQELDAQQAQVNELQGTITADEANVASAQLQ 222

Query: 166 MKLTRMRSIYLNRLDLEN 183
           +  +R+ +    R+ L+ 
Sbjct: 223 LDWSRITAPVAGRVGLKQ 240



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 65/238 (27%), Gaps = 57/238 (23%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           F  G       L  ++       +     + + +   A L++ ++DL   + L + N VS
Sbjct: 133 FQEGQQVNAGDLLAQID-PSQFKVALAQAQGQLAKDNATLANARRDLARYQQLAKSNLVS 191

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + +L+ Q+  V +    +  +     +                                 
Sbjct: 192 RQELDAQQAQVNELQGTITADEANVASAQLQ----------------------------- 222

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIV---PHSKL 327
                          +   I +P+AG +   +     N         ++ I    P    
Sbjct: 223 --------------LDWSRITAPVAGRV-GLKQVDIGNQISSGDTAGIVVITQTHPID-- 265

Query: 328 TYIRAKVTPKQIQHVKKGYTA--TVRFPHYADIREKKF-KAIIEKIDPIISQQDNNLQ 382
                 +    I  V +   A  T+    +      K  + ++  +D  I      ++
Sbjct: 266 LIFT--LPESDIATVVQAQKAGKTLTVEAWDRTNSHKLSEGVLLSLDNQIDPTTGTIK 321


>gi|116249609|ref|YP_765447.1| putative exopolysaccharide production protein [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115254257|emb|CAK03872.1| putative exopolysaccharide production protein [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 437

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/194 (11%), Positives = 56/194 (28%), Gaps = 9/194 (4%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             ID   +        +  E +    +     +              +    ++    +F
Sbjct: 173 REIDHSLLRSTAKLARLQAEMTGAKEITFDRTLGVD---------QQYAAGIYNEERVIF 223

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +++ R  K        +      L  K       + S ++ LT +K L  K     
Sbjct: 224 QARANALDRQSKALTELRDLLNSEVGMLGEKVQGSEDNIKSIEEQLTSVKTLVSKGLTVS 283

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +     ER++     +  + +       + I+E        +     E++ +L+  Q + 
Sbjct: 284 SRQLDLERLLTTYRSDRLDLVTAIMRGRQAISETTRNLEGLYDTRRSEVASELQSEQASL 343

Query: 274 ADEMSKLTILEKTR 287
                K  + +K  
Sbjct: 344 DQLKLKREMTQKLL 357


>gi|73541428|ref|YP_295948.1| secretion protein HlyD [Ralstonia eutropha JMP134]
 gi|72118841|gb|AAZ61104.1| Secretion protein HlyD [Ralstonia eutropha JMP134]
          Length = 381

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 85/287 (29%), Gaps = 27/287 (9%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W +    +     + +   +  VV + S  SG + +  V N   +  G  L   +  +
Sbjct: 44  LAWYLFA--DRYTPYTQQARVQAFVVPVASEVSGRVTRVLVHNNQDVQAGAVLFEVDPQQ 101

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                D  +  ++++R  I    + +           +A E +  Q  D L + +S    
Sbjct: 102 YRIAADRARADLESMRRQIGASTAGIASAQAGLRA-AQANEVKARQDSDRLERLYSEDPG 160

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             +     V R+   +               ++    RA +   ++     +    K   
Sbjct: 161 TVSLRRLEVARATHTQAV-------------SQVDAARAEVVRAREQQGGSEEDNAKLRS 207

Query: 212 SQNDLNQQERIVYKS--TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           S   L + E  +  S     +   I + +                 A +   IS D+ +N
Sbjct: 208 SAAALEKAELDLANSRVRARIAGLITDLRTEAGQYAAAGSPVMTLIAIHDIWISADMTEN 267

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                +  + + I+              G ++  +  S        Q
Sbjct: 268 NLGRVEPGTPVGIVLDALP---------GRVLSGRVRSIGYGVSVGQ 305


>gi|57113901|ref|NP_001009009.1| coiled-coil alpha-helical rod protein 1 [Pan troglodytes]
 gi|42558936|sp|Q8HZ60|CCHCR_PANTR RecName: Full=Coiled-coil alpha-helical rod protein 1; AltName:
           Full=Alpha-helical coiled-coil rod protein
 gi|23296103|gb|AAN12279.1| HCR [Pan troglodytes]
          Length = 782

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 79/205 (38%), Gaps = 5/205 (2%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             + L+   ++  R  +D E      L  +     +     E Q L  + +      +  
Sbjct: 499 ADVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQT 558

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAV 211
              ++S+   L++     +        L  + +  + L   +  +K   +   L E+ + 
Sbjct: 559 QESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSD 618

Query: 212 SQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           ++  LN+  R   K+ + LR+      ++K   + +  L +EA  E    L    ++LE+
Sbjct: 619 TERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELER 678

Query: 269 NQRTFADEMSKLTILEKTREQKTIL 293
           ++      + +  +L + ++Q+ + 
Sbjct: 679 DKNLMLATLQQEGLLSRYKQQRLLT 703



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 62/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E +   L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 85  QALSQQAEVIARQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEA- 143

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+   SQ +L + +R+  +    L +   E  + L    E  
Sbjct: 144 -EGLRAALAGAEVVRKNLEEG--SQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGL 200

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 201 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 243


>gi|325117615|emb|CBZ53167.1| conserved hypothetical protein [Neospora caninum Liverpool]
          Length = 1196

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 67/193 (34%), Gaps = 5/193 (2%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  R + +  +  L  L  +    ++  E+ EE L     +        F   +++  + 
Sbjct: 406 EQSRTNSEANRDTLRLLEEQKLATQRLLETHEESLRAQEQRLRDE----FQRQLAAFSKE 461

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
              +++         LD   + + L    +S  ++L + +   EK    +    ++E  V
Sbjct: 462 KSQEVSIQMEHVREALDELRRETALWQQKASQSEELDLQREEAEKRCRQREQQLRKELEV 521

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                +       +    R   +  +    +  +  + +S   ++ Q+ + D ++ L+  
Sbjct: 522 VLRQQQELRQEQSEARQTRQ-QDRAERLEKKLEDVKRFVSDREKEAQKHYLDLIAALSCA 580

Query: 284 EKTREQKTILSPI 296
                   + +P+
Sbjct: 581 ASPSPAGPLRAPL 593



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/210 (9%), Positives = 57/210 (27%), Gaps = 14/210 (6%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL---------LDFLGKYH 146
              K    +      + ++   D  + +   ++K+ E +  ++         L  L    
Sbjct: 303 AAFKDFEEREAALRAEVDRRIRDSQSYQEQEIKKSREEQRREISKLQETQLPLQNLPGLL 362

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               +      S+   +       +       L L ++   +     ++ +       L 
Sbjct: 363 EELGRRIQDNASTQKEAQMSFQVELFQNQRECLGLRDRLDNMEEQSRTNSEANRDTLRLL 422

Query: 207 EKNAVSQNDLNQ-----QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           E+  ++   L +           +   E +  +            +  E   E  + L+ 
Sbjct: 423 EEQKLATQRLLETHEESLRAQEQRLRDEFQRQLAAFSKEKSQEVSIQMEHVREALDELRR 482

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +   +Q      +   +    EK   Q+ 
Sbjct: 483 ETALWQQKASQSEELDLQREEAEKRCRQRE 512


>gi|313677509|ref|YP_004055505.1| efflux transporter, rnd family, mfp subunit [Marivirga tractuosa
           DSM 4126]
 gi|312944207|gb|ADR23397.1| efflux transporter, RND family, MFP subunit [Marivirga tractuosa
           DSM 4126]
          Length = 417

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 57/189 (30%), Gaps = 3/189 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVEN-GSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +  +G +        + +   GII +  V   G+ + +G  +LT  +      +  ++  
Sbjct: 62  IPVTGNVEP-GETFYLDAIEGGIIAEI-VRESGAIVEKGDTILTLTNSNLQLEVMQRETQ 119

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +     ++   +  LD  +          + +   L     ++ S   +           
Sbjct: 120 LYEQINNLRQTRLLLDQNDLSQQAQLAEIDYQLNLLKPQYIRFKSLFEQKLISEREFEEV 179

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
               +    R     R    +  + +  L      +  M ++L     +  N   +  R 
Sbjct: 180 RENYEYNVKRKQLTYRSYKNDSVARVFQLRQLSNSEARMQRSLDAVGKILNNLTLKASRD 239

Query: 223 VYKSTLELR 231
              +T +L 
Sbjct: 240 GQLATPQLE 248


>gi|292627885|ref|XP_002666779.1| PREDICTED: myosin-7-like [Danio rerio]
          Length = 1938

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 77/214 (35%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   LR  +D   S ++ L      LEK   + E+Q+ ++  KY
Sbjct: 1208 QIDNLQRVKQKLEKEKS--ELRLELDDVVSNMEQLAKAKANLEKICRTLEDQMSEYRTKY 1265

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                + R L+ K + +  +  ++     +   L+  L    
Sbjct: 1266 EEGQRSINDFTMQKARLQTENGELTRQLEEKDSLVSQLTRSKQSYTQQIEDLKRQLEEEV 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+ ++ +  + +      Y+   ++  
Sbjct: 1326 KAKNALAHAVQSARHDSDLLREQYEEEQEAKAELQRSLSKANSEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L++  + L Q  +   + +  +     + E+ 
Sbjct: 1386 EELEDAKKKLAQRLQDAEEAVEAVNAKCSSLEKT 1419



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 64/207 (30%), Gaps = 6/207 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E  ++ +  + +       I+  K            LE+A    E        K+  + S
Sbjct: 1144 ELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATASTLRKKHADSVS 1203

Query: 151  KV------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +             + +        +  +  N   L    + L  +  + +  ++  + 
Sbjct: 1204 DLGEQIDNLQRVKQKLEKEKSELRLELDDVVSNMEQLAKAKANLEKICRTLEDQMSEYRT 1263

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             +E+   S ND   Q+  +     EL   + E+ +++  +         +  +  +++  
Sbjct: 1264 KYEEGQRSINDFTMQKARLQTENGELTRQLEEKDSLVSQLTRSKQSYTQQIEDLKRQLEE 1323

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
            +++          S     +  REQ  
Sbjct: 1324 EVKAKNALAHAVQSARHDSDLLREQYE 1350



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 71/189 (37%), Gaps = 5/189 (2%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
              ++L   +   K++ +   +  + +++  ++ +E++ D   +   +   +  + +  + 
Sbjct: 1475 EARSLSTELFKLKNSYEESLDHLESMKRENKNLQEEIADLTEQIGESGKNI--HELEKMR 1532

Query: 162  RSLKMKLTRMRSIYLNRLDL--ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            + L+ +   +++            +  +LRA L   Q    + + L EK+   +     Q
Sbjct: 1533 KQLEQEKAEIQAALEEAEGSLEHEEGKILRAQLEFSQIKADIERKLSEKDEEMEQAKRNQ 1592

Query: 220  ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            +R++      L      +   LR   ++  + N E    L + +R   + Q+        
Sbjct: 1593 QRMIDTLQSSLESETRSRNEALRLKKKMEGDLN-EMEIQLSQANRQASEAQKQLKSLQGH 1651

Query: 280  LTILEKTRE 288
            L   +   +
Sbjct: 1652 LKDAQMQLD 1660



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 69/217 (31%), Gaps = 20/217 (9%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            +        + +++     ++ E     ++ L+F   K D+  K  E  EE  ++   + 
Sbjct: 1534 QLEQEKAEIQAALEEAEGSLEHEEGKILRAQLEFSQIKADIERKLSEKDEE--MEQAKRN 1591

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                       + S  RS    L   + +  +  ++E + S      S  QK L  ++  
Sbjct: 1592 QQRMIDTLQSSLESETRSRNEALRLKKKMEGDLNEMEIQLSQANRQASEAQKQLKSLQGH 1651

Query: 206  FEKNAVSQNDLNQQ-----------ERIVYKSTLELRENIH--EQKNMLRHINELYDEAN 252
             +   +  +D  +            ER       EL E     EQ    R + E      
Sbjct: 1652 LKDAQMQLDDALRANDDLKENIAIVERRNNLLQAELDELRSLVEQTERGRKLAEQELMDV 1711

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E    L   +  L   ++    + ++L    +   Q
Sbjct: 1712 SERVQLLHSQNTSLLNQKKKLEGDNTQLQTEVEEAVQ 1748


>gi|317049774|ref|YP_004117422.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
 gi|316951391|gb|ADU70866.1| secretion protein HlyD family protein [Pantoea sp. At-9b]
          Length = 309

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 69/231 (29%), Gaps = 23/231 (9%)

Query: 204 NLFEKN----AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            L +K      V +    +            +   +E++      N+L   A       +
Sbjct: 67  QLVKKGDTLFVVDRPRYQKALDEAQADVEYYQAVANEKRREAARRNQLGTSAMSR--EAI 124

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            + + DL   +   A  ++   +     ++ TI +P  G +     +    +  +    +
Sbjct: 125 DQANNDLTTTEHQLAKAIATRDLAAIDLDRTTIKAPSDGWVTNLNVY-QGEFITRGSVAV 183

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +V      Y+ A +   ++  V+ G+ A +             +  ++ I   ++   +
Sbjct: 184 ALV-QQHTFYVLAYMEETKLDGVRPGFRAEI--TPLGSNT--VLRGTVDSIAAGVTDSSS 238

Query: 380 NLQTQEYYEV-----------ILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
              ++    V            + +              G  A V+ T + 
Sbjct: 239 TNDSKGMATVDSNLEWVRLAQRVPVRIHLDDQPGNRFPAGTTATVVITGEK 289



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 50/154 (32%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R        + L+ +  +I    W            + +     +VV I    +G+
Sbjct: 2   KALIRKIARYAITLLLVVVAIVIIFRAWVFYTE----SPWTRDAKFSADVVAISPDVTGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V +   + +G  L   +       +D  +  ++  +  +  EK       N+   
Sbjct: 58  ITDVPVRDNQLVKKGDTLFVVDRPRYQKALDEAQADVEYYQA-VANEKRREAARRNQLGT 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E+ ++   D     H     +    ++++
Sbjct: 117 SAMSREAIDQANNDLTTTEHQLAKAIATRDLAAI 150


>gi|221370012|ref|YP_002521108.1| Secretion protein HlyD family protein precursor [Rhodobacter
           sphaeroides KD131]
 gi|221163064|gb|ACM04035.1| Secretion protein HlyD family protein precursor [Rhodobacter
           sphaeroides KD131]
          Length = 343

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 8/262 (3%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
                +L+ + G++ L+    L P   ++ ++       NV  +    SG +   +V + 
Sbjct: 3   PTAIASLIGLAGVLLLLFAWHLPPFAPAMPTTENAYLRGNVTIVAPQLSGYLSAVEVTDF 62

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G  +   +D      +   + ++ + R   +     +          E A E+  
Sbjct: 63  QTVEAGDVIARIDDRIYRQKLAQAEATLASARAAREVATQGVHSAEANVTSGEAALEAAR 122

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             L   +    ST ++       +   + +     ++         E +  +LR  ++S 
Sbjct: 123 SALATAMA--DSTRTEELRARGVASTATGEQVQLALQRAEAEVAQSEAQLEVLREEVNSA 180

Query: 196 QKDLTMMKNLF--EKNAVSQNDLNQQERIVYK----STLELRENIHEQKNMLRHINELYD 249
           +  +   +      + AV    ++    +++        ++   + +  +    +     
Sbjct: 181 RAQIATAEAQIATAEAAVELARIDLANTVIHAPGPGKLGQVGARVGQYVSAGTALVSHVG 240

Query: 250 EANLEFANYLKEISRDLEQNQR 271
                 AN+ +     L  NQR
Sbjct: 241 RDRWVIANFKETNLHGLALNQR 262



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/326 (11%), Positives = 88/326 (26%), Gaps = 30/326 (9%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           LR ++      L    +  +V +       + +     + +          ++S   + +
Sbjct: 39  LRGNVTIVAPQLSGYLSAVEVTDFQTVEAGDVIARIDDRIYRQKLAQAEATLASARAARE 98

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           +    + S   N    E      R+ L++   D T  + L  +   S     Q +  + +
Sbjct: 99  VATQGVHSAEANVTSGEAALEAARSALATAMADSTRTEELRARGVASTATGEQVQLALQR 158

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  E+ ++  + + +   +N                    +   +   A   + + +   
Sbjct: 159 AEAEVAQSEAQLEVLREEVNSA---------------RAQIATAEAQIATAEAAVELARI 203

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 I +P  G +    +     Y      L+  V   +     A      +  +   
Sbjct: 204 DLANTVIHAPGPGKLGQVGAR-VGQYVSAGTALVSHVGRDRWVI--ANFKETNLHGLALN 260

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYY----EVILKITDLA 397
                        R   F   +    P  + +         T  +      V ++I+   
Sbjct: 261 QRVAFSVDAMGGRR---FTGRVAAFSPAAASEFSLMAGTNATGNFTKIAQRVPVRISIDP 317

Query: 398 FSDNNIELRNGFPAEVLFTAK-NTTL 422
             +    L  G    V      + TL
Sbjct: 318 GQEGGEHLAPGLSVVVSVETDPDRTL 343


>gi|1408194|gb|AAB03661.1| myosin heavy chain [Placopecten magellanicus]
          Length = 1950

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 74/193 (38%), Gaps = 15/193 (7%)

Query: 100  KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
            +  + +L   ++  + +++ L ++   L+        QL D              + +S 
Sbjct: 1252 ESQVSDLNARLEDSQRSINELQSQKSRLQAENSDLSRQLEDA------------EHRVSV 1299

Query: 160  VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            + +      +++     +  D     + L+  + +   D+   +   E+   S++D+   
Sbjct: 1300 LSKEKSQLTSQLEDARRSLEDETRARTKLQNEIRNMHADMDAAREQLEEEQESKSDV--- 1356

Query: 220  ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            +R + K+  E+++   + ++   +  E  ++   +    L E  +++E      +     
Sbjct: 1357 QRQLSKANNEIQQWRSKFESEGANRTEELEDQKRKILGKLSEAEQNMEAANAKASALDKA 1416

Query: 280  LTILEKTREQKTI 292
             + L++  E  +I
Sbjct: 1417 KSRLQQELEDLSI 1429



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 68/209 (32%), Gaps = 12/209 (5%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +        +++ +  +  E S L       +         + QL   L     +     
Sbjct: 1263 EDSQRSINELQSQKSRLQAENSDLSRQLEDAEHRVSVLSKEKSQLTSQLEDARRSLEDET 1322

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE-KNAVS 212
                + +   ++     M +      + +   S ++  LS    ++   ++ FE + A  
Sbjct: 1323 RAR-TKLQNEIRNMHADMDAAREQLEEEQESKSDVQRQLSKANNEIQQWRSKFESEGANR 1381

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR------DL 266
              +L  Q+R +     E  +N+         +++       E  +   E+ R       +
Sbjct: 1382 TEELEDQKRKILGKLSEAEQNMEAANAKASALDKAKSRLQQELEDLSIEVDRANANVNQM 1441

Query: 267  EQNQR----TFADEMSKLTILEKTREQKT 291
            E+ QR    T ++  SK+  L+   E   
Sbjct: 1442 EKKQRAFDKTTSEWQSKVNSLQSELENSQ 1470



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 60/182 (32%), Gaps = 5/182 (2%)

Query: 110  IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            +  E+   + LN     LE+A +  E+ L     +             S V + LK    
Sbjct: 1009 LQAEEDKCNHLNKLKAKLEQALDELEDNL-----EREKKVRGDVEKAKSKVEQDLKSTQE 1063

Query: 170  RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
             +  +   + +LE       A +++    L   +NL  +      +L  +   + +    
Sbjct: 1064 NVEDLERVKRELEENVRRKEAEITTLNSKLEDEQNLVSQLQRKIKELQARIEELEEELEA 1123

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             R    + +     +N   +E            S  +E N++  A+ +     LE+   Q
Sbjct: 1124 ERNARSKVEKQRAELNRELEELGERLDEAGGATSAQIELNKKREAELLKIRRDLEEASLQ 1183

Query: 290  KT 291
              
Sbjct: 1184 HE 1185



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 71/238 (29%), Gaps = 37/238 (15%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E    +   +  I+ ++  I+ E+   D     Y++ E+       ++ +          
Sbjct: 1637 EMEKTVKRYQQQIREMQTSIEEEQRQRDEARESYNMAERRCTLMSGEVEELRAALEQAER 1696

Query: 151  --KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              K     ++     +    +++ S+   +  LE   + ++  L     +L       +K
Sbjct: 1697 ARKGSENELADANDRVNELTSQVSSVQGQKRKLEGDINAMQTDLDEMHGELKGADERCKK 1756

Query: 209  NAVSQNDL---NQQERIVYKSTLELRENIHEQ-------------------KNMLRHINE 246
                   L    + E+       ++R+N+  Q                   K +++ +  
Sbjct: 1757 AMADAARLADELRAEQDHSNQVEKVRKNLESQVKEFQIRLDEAEASSLKGGKKLIQKLES 1816

Query: 247  LYDEANLEFANYLK---EISRDLEQNQRTFADE----------MSKLTILEKTREQKT 291
               E   E  N  +   E  +++ +  R   +             +L  L      K 
Sbjct: 1817 RVHELEAELDNEQRRHAETQKNMRKADRRLKELAFQADEDRKNQERLQELIDKLNAKI 1874


>gi|9916|emb|CAA39663.1| liver stage antigen [Plasmodium falciparum]
          Length = 1909

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 7/208 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
              + +  ++  ++  R   +  +     L  +    EK  E + +   D L K      
Sbjct: 748 RAKEKLQEQQSDLEQDRLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQDRLAKEKLQEQ 807

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNL 205
           +            L+ + + +    L +  L+ + S L     + +K            L
Sbjct: 808 QSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQDRL 867

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEIS 263
            ++    Q    +QER   +   E + ++ +++     + E   +   E      L+E  
Sbjct: 868 AKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQ 927

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
           RDLEQ +R       + + LE+ R  K 
Sbjct: 928 RDLEQERRAKEKLQEQQSDLEQERRAKE 955



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 70/207 (33%), Gaps = 7/207 (3%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              + +  ++  ++  R   +  +     L       EK  E + +   +   K      +
Sbjct: 1361 AKEKLQEQQSDLEQERRAKEKLQEQQSDLEQDRLAKEKLQEQQRDLEQERRAKEKLQEQQ 1420

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNLF 206
                        L+ + + +      +  L+ + S L     + +K          + L 
Sbjct: 1421 SDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLA 1480

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISR 264
            ++    Q    +QER   +   E + ++ +++     + E   +   E      L+E  R
Sbjct: 1481 KEKLQEQQRDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLANEKLQEQQR 1540

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
            DLEQ +R       + + LE+ R  K 
Sbjct: 1541 DLEQERRAKEKLQEQQSDLEQERRAKE 1567



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 71/208 (34%), Gaps = 7/208 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               + +  ++  ++  R   +  +     L  +    EK  E + +   + L K      
Sbjct: 1275 RAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQ 1334

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNL 205
            +            L+ + + +    L +  L+ + S L     + +K            L
Sbjct: 1335 QSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQDRL 1394

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEIS 263
             ++    Q    +QER   +   E + ++ +++     + E   +   E      L+E  
Sbjct: 1395 AKEKLQEQQRDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQ 1454

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
             DLEQ +R       + + LE+ R  K 
Sbjct: 1455 SDLEQERRAKEKLQEQQSDLEQERLAKE 1482



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 73/207 (35%), Gaps = 7/207 (3%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            + + +  ++  ++  R   +  +     L  +    EK  E + +   + L K      +
Sbjct: 1191 SKETLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQ 1250

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNLF 206
                        L+ + + +      +  L+ + S L     + +K          + L 
Sbjct: 1251 SDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLA 1310

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISR 264
            ++    Q    +QER+  +   E + ++ +++     + E   +   E      L+E   
Sbjct: 1311 KEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQS 1370

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
            DLEQ +R       + + LE+ R  K 
Sbjct: 1371 DLEQERRAKEKLQEQQSDLEQDRLAKE 1397



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 72/208 (34%), Gaps = 7/208 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
              + +  ++  ++  R   +  +     L  +    EK  E + +   + L K      
Sbjct: 272 RAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQ 331

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNL 205
           +            L+ + + +    L +  L+ + S L     + +K            L
Sbjct: 332 QSDLEQERLAKEKLQEQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQEQQSDLEQDRL 391

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEIS 263
            ++    Q    +QER+  +   E + ++ +++     + E   +   E      L+E  
Sbjct: 392 AKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQ 451

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
            DLEQ +R       + + LE+ R  K 
Sbjct: 452 SDLEQERRAKEKLQEQQSDLEQERRAKE 479



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 7/200 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +     K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 812  EQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKL---QEQQSDLEQDRLA 868

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ +      +   + DLE +      L    Q+     + L ++    Q
Sbjct: 869  KEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKL--QEQQSDLEQERLAKEKLQEQ 926

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQR 271
                +QER   +   E + ++ +++     + E   +   E      L+E   DLEQ + 
Sbjct: 927  QRDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERL 986

Query: 272  TFADEMSKLTILEKTREQKT 291
                   + + LE+ R  K 
Sbjct: 987  AKEKLQEQQSDLEQERLAKE 1006



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 71/208 (34%), Gaps = 7/208 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
              + +  ++  ++  R   +  +     L  +    EK  E + +   D L K      
Sbjct: 714 RAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQDRLAKEKLQEQ 773

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNL 205
           +            L+ + + +    L +  L+ + S L     + +K          + L
Sbjct: 774 QSDLEQERRAKEKLQEQQSDLEQDRLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERL 833

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEIS 263
            ++    Q    +QER   +   E + ++ + +     + E   +   E      L+E  
Sbjct: 834 AKEKLQEQQSDLEQERRAKEKLQEQQSDLEQDRLAKEKLQEQQSDLEQERRAKEKLQEQQ 893

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
            DLEQ +R       + + LE+ R  K 
Sbjct: 894 SDLEQERRAKEKLQEQQSDLEQERLAKE 921



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 72/200 (36%), Gaps = 7/200 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +     K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 1254 EQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKL---QEQQSDLEQERLA 1310

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ +      +   + DLE +      L    Q+     + L ++    Q
Sbjct: 1311 KEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKL--QEQQSDLEQERLAKEKLQEQ 1368

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQR 271
                +QER   +   E + ++ + +     + E   +   E      L+E   DLEQ +R
Sbjct: 1369 QSDLEQERRAKEKLQEQQSDLEQDRLAKEKLQEQQRDLEQERRAKEKLQEQQSDLEQERR 1428

Query: 272  TFADEMSKLTILEKTREQKT 291
                   + + LE+ R  K 
Sbjct: 1429 AKEKLQEQQSDLEQERRAKE 1448



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 72/207 (34%), Gaps = 7/207 (3%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              + +  ++  ++  R   +  +     L  +    EK  E + +   +   K      +
Sbjct: 1123 AKEKLQGQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQ 1182

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNLF 206
                   +   +L+ + + +    L +  L+ + S L     + +K          + L 
Sbjct: 1183 SDLERTKASKETLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLA 1242

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISR 264
            ++    Q    +QER   +   E + ++ +++     + E   +   E      L+E   
Sbjct: 1243 KEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQS 1302

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
            DLEQ +        + + LE+ R  K 
Sbjct: 1303 DLEQERLAKEKLQEQQSDLEQERLAKE 1329



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 76/200 (38%), Gaps = 7/200 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 1101 EQERLAKEKLQGQQSDLEQERLAKEKLQGQQSDLEQERLAKEKL---QEQQSDLEQERLA 1157

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ +      +   + DLE   +  +  L   Q DL   + L ++    Q
Sbjct: 1158 KEKLQEQQSDLEQERRAKEKLQEQQSDLERTKAS-KETLQEQQSDLE-QERLAKEKLQEQ 1215

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQR 271
                +QER   +   E + ++ +++     + E   +   E      L+E   DLEQ +R
Sbjct: 1216 QSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERR 1275

Query: 272  TFADEMSKLTILEKTREQKT 291
                   + + LE+ R  K 
Sbjct: 1276 AKEKLQEQQSDLEQERRAKE 1295



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 72/208 (34%), Gaps = 7/208 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
              + +  ++  ++  R   +  +     L  +    EK  E + +   + L K      
Sbjct: 238 RAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQ 297

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNL 205
           +            L+ + + +    L +  L+ + S L     + +K          + L
Sbjct: 298 QSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERL 357

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEIS 263
            ++    Q    +QER+  +   E + ++ + +     + E   +   E      L+E  
Sbjct: 358 AKEKLQGQQSDLEQERLAKEKLQEQQSDLEQDRLAKEKLQEQQSDLEQERLAKEKLQEQQ 417

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
            DLEQ +R       + + LE+ R  K 
Sbjct: 418 SDLEQERRAKEKLQEQQSDLEQERLAKE 445



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 76/200 (38%), Gaps = 7/200 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 574 EQERLAKEKLQEQQSDLEQERLAKEKLQGQQSDLEQERLAKEKL---QGQQSDLEQERLA 630

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L+ +      +   + DLE   +  +  L   Q DL   + L ++    Q
Sbjct: 631 KEKLQEQQSDLEQERLAKEKLQEQQSDLERTKAS-KETLQEQQSDLE-QERLAKEKLQEQ 688

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQR 271
               +QER   +   E + ++ +++     + E   +   E      L+E   DLEQ +R
Sbjct: 689 QSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERR 748

Query: 272 TFADEMSKLTILEKTREQKT 291
                  + + LE+ R  K 
Sbjct: 749 AKEKLQEQQSDLEQDRLAKE 768



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 76/200 (38%), Gaps = 7/200 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +     K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 302 EQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKL---QEQQSDLEQERLA 358

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    Q
Sbjct: 359 KEKLQGQQSDLEQERLAKEKLQEQQSDLE-QDRLAKEKLQEQQSDLE-QERLAKEKLQEQ 416

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQR 271
               +QER   +   E + ++ +++     + E   +   E      L+E   DLEQ +R
Sbjct: 417 QSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERR 476

Query: 272 TFADEMSKLTILEKTREQKT 291
                  + + LE+ R  K 
Sbjct: 477 AKEKLQEQQSDLEQERLAKE 496



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 74/200 (37%), Gaps = 7/200 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +     K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      +  
Sbjct: 1220 EQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKL---QEQQSDLEQERRA 1276

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    Q
Sbjct: 1277 KEKLQEQQSDLEQERRAKEKLQEQQSDLE-QERLAKEKLQEQQSDLE-QERLAKEKLQEQ 1334

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQR 271
                +QER   +   E + ++ +++     + E   +   E      L+E   DLEQ++ 
Sbjct: 1335 QSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQDRL 1394

Query: 272  TFADEMSKLTILEKTREQKT 291
                   +   LE+ R  K 
Sbjct: 1395 AKEKLQEQQRDLEQERRAKE 1414



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 73/200 (36%), Gaps = 7/200 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 387 EQDRLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKL---QEQQSDLEQERLA 443

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L+ +      +   + DLE +      L    Q+     + L ++    Q
Sbjct: 444 KEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKL--QEQQSDLEQERLAKEKLQEQ 501

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQR 271
               +QER+  +   E + +  +++     + E   +   E      L+E   DLEQ + 
Sbjct: 502 QSDLEQERLAKEKLQEQQSDSEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERL 561

Query: 272 TFADEMSKLTILEKTREQKT 291
                  + + LE+ R  K 
Sbjct: 562 AKEKLQEQQSDLEQERLAKE 581



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 68/207 (32%), Gaps = 7/207 (3%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             + +  ++  ++  +   +T +     L  +    EK  E + +   +   K      +
Sbjct: 647 AKEKLQEQQSDLERTKASKETLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQ 706

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNLF 206
                       L+ + + +      +  L+ + S L     + +K            L 
Sbjct: 707 SDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQDRLA 766

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISR 264
           ++    Q    +QER   +   E + ++ + +     + E   +   E      L+E   
Sbjct: 767 KEKLQEQQSDLEQERRAKEKLQEQQSDLEQDRLAKEKLQEQQSDLEQERRAKEKLQEQQS 826

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKT 291
           DLEQ +        + + LE+ R  K 
Sbjct: 827 DLEQERLAKEKLQEQQSDLEQERRAKE 853



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 77/201 (38%), Gaps = 7/201 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           ++   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++
Sbjct: 522 SEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKL---QEQQSDLEQERL 578

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    
Sbjct: 579 AKEKLQEQQSDLEQERLAKEKLQGQQSDLE-QERLAKEKLQGQQSDLE-QERLAKEKLQE 636

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQ 270
           Q    +QER+  +   E + ++   K     + E   +   E      L+E   DLEQ +
Sbjct: 637 QQSDLEQERLAKEKLQEQQSDLERTKASKETLQEQQSDLEQERLAKEKLQEQQSDLEQER 696

Query: 271 RTFADEMSKLTILEKTREQKT 291
           R       + + LE+ R  K 
Sbjct: 697 RAKEKLQEQQSDLEQERRAKE 717



 Score = 46.5 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 7/200 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 336 EQERLAKEKLQEQQSDLEQERLAKEKLQGQQSDLEQERLAKEKL---QEQQSDLEQDRLA 392

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L+ +      +   + DLE +      L    Q+     + L ++    Q
Sbjct: 393 KEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKL--QEQQSDLEQERLAKEKLQEQ 450

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQR 271
               +QER   +   E + ++ +++     + E   +   E      L+E   DLEQ + 
Sbjct: 451 QSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERL 510

Query: 272 TFADEMSKLTILEKTREQKT 291
                  + +  E+ R  K 
Sbjct: 511 AKEKLQEQQSDSEQERLAKE 530



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 70/207 (33%), Gaps = 7/207 (3%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             + +  ++  ++  R   +  +     L  +    EK  E + +   +   K      +
Sbjct: 681 AKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQ 740

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNLF 206
                       L+ + + +    L +  L+ + S L     + +K            L 
Sbjct: 741 SDLEQERRAKEKLQEQQSDLEQDRLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQDRLA 800

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISR 264
           ++    Q    +QER   +   E + ++ +++     + E   +   E      L+E   
Sbjct: 801 KEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQS 860

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKT 291
           DLEQ++        + + LE+ R  K 
Sbjct: 861 DLEQDRLAKEKLQEQQSDLEQERRAKE 887



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 73/210 (34%), Gaps = 7/210 (3%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D    + +  ++  ++  R   +  +     L  +    EK  E + +   + L K    
Sbjct: 389 DRLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQ 448

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----K 203
             +            L+ + + +      +  L+ + S L     + +K          +
Sbjct: 449 EQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQE 508

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKE 261
            L ++    Q   ++QER+  +   E + ++ +++     + E   +   E      L+E
Sbjct: 509 RLAKEKLQEQQSDSEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQE 568

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              DLEQ +        + + LE+ R  K 
Sbjct: 569 QQSDLEQERLAKEKLQEQQSDLEQERLAKE 598



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 71/207 (34%), Gaps = 7/207 (3%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
             + +  ++  ++  R   +  +     L  +    EK  E + +   +   K      +
Sbjct: 205 AKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQ 264

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNLF 206
                       L+ + + +    L +  L+ + S L     + +K          + L 
Sbjct: 265 SDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLA 324

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISR 264
           ++    Q    +QER+  +   E + ++ +++     +     +   E      L+E   
Sbjct: 325 KEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQEQQS 384

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKT 291
           DLEQ++        + + LE+ R  K 
Sbjct: 385 DLEQDRLAKEKLQEQQSDLEQERLAKE 411



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 73/201 (36%), Gaps = 7/201 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           ++   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      + 
Sbjct: 182 SEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKL---QEQQSDLEQERR 238

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               +      L+ +      +   + DLE +      L    Q+     + L ++    
Sbjct: 239 AKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKL--QEQQSDLEQERLAKEKLQE 296

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQ 270
           Q    +QER   +   E + ++ +++     + E   +   E      L+E   DLEQ +
Sbjct: 297 QQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQER 356

Query: 271 RTFADEMSKLTILEKTREQKT 291
                   + + LE+ R  K 
Sbjct: 357 LAKEKLQGQQSDLEQERLAKE 377



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 73/200 (36%), Gaps = 7/200 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 863  EQDRLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKL---QEQQSDLEQERLA 919

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +    R L+ +      +   + DLE +      L    Q+     + L ++    Q
Sbjct: 920  KEKLQEQQRDLEQERRAKEKLQEQQSDLEQERRAKEKL--QEQQSDLEQERLAKEKLQEQ 977

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQR 271
                +QER+  +   E + ++ +++     +     +   E      L+    DLEQ + 
Sbjct: 978  QSDLEQERLAKEKLQEQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQGQQSDLEQERL 1037

Query: 272  TFADEMSKLTILEKTREQKT 291
                   + + LE+ R  K 
Sbjct: 1038 AKEKLQEQQSDLEQERLAKE 1057



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 78/200 (39%), Gaps = 7/200 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 1016 EQERLAKEKLQGQQSDLEQERLAKEKLQEQQSDLEQERLAKEKL---QEQQSDLEQERLA 1072

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    Q
Sbjct: 1073 KEKLQGQQSDLEQERLAKEKLQGQQSDLE-QERLAKEKLQGQQSDLE-QERLAKEKLQGQ 1130

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQR 271
                +QER+  +   E + ++ +++     + E   +   E      L+E   DLE+ + 
Sbjct: 1131 QSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLERTKA 1190

Query: 272  TFADEMSKLTILEKTREQKT 291
            +      + + LE+ R  K 
Sbjct: 1191 SKETLQEQQSDLEQERLAKE 1210



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 77/200 (38%), Gaps = 7/200 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 1033 EQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKL---QGQQSDLEQERLA 1089

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    Q
Sbjct: 1090 KEKLQGQQSDLEQERLAKEKLQGQQSDLE-QERLAKEKLQGQQSDLE-QERLAKEKLQEQ 1147

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQR 271
                +QER+  +   E + ++ +++     + E   +     A    L+E   DLEQ + 
Sbjct: 1148 QSDLEQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLERTKASKETLQEQQSDLEQERL 1207

Query: 272  TFADEMSKLTILEKTREQKT 291
                   + + LE+ R  K 
Sbjct: 1208 AKEKLQEQQSDLEQERRAKE 1227



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 75/200 (37%), Gaps = 7/200 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 1050 EQERLAKEKLQEQQSDLEQERLAKEKLQGQQSDLEQERLAKEKL---QGQQSDLEQERLA 1106

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    Q
Sbjct: 1107 KEKLQGQQSDLEQERLAKEKLQGQQSDLE-QERLAKEKLQEQQSDLE-QERLAKEKLQEQ 1164

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQR 271
                +QER   +   E + ++   K     + E   +   E      L+E   DLEQ +R
Sbjct: 1165 QSDLEQERRAKEKLQEQQSDLERTKASKETLQEQQSDLEQERLAKEKLQEQQSDLEQERR 1224

Query: 272  TFADEMSKLTILEKTREQKT 291
                   + + LE+ R  K 
Sbjct: 1225 AKEKLQEQQSDLEQERLAKE 1244



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 72/208 (34%), Gaps = 7/208 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
              + +  ++  ++  R   +  +     L  +    EK  E + +   + L K      
Sbjct: 476 RAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDSEQERLAKEKLQEQ 535

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNL 205
           +            L+ + + +    L +  L+ + S L     + +K          + L
Sbjct: 536 QSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERL 595

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEIS 263
            ++    Q    +QER+  +     + ++ +++     + E   +   E      L+E  
Sbjct: 596 AKEKLQGQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQ 655

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
            DLE+ + +      + + LE+ R  K 
Sbjct: 656 SDLERTKASKETLQEQQSDLEQERLAKE 683



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 75/200 (37%), Gaps = 7/200 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +     K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 234 EQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKL---QEQQSDLEQERLA 290

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    Q
Sbjct: 291 KEKLQEQQSDLEQERRAKEKLQEQQSDLE-QERLAKEKLQEQQSDLE-QERLAKEKLQEQ 348

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQR 271
               +QER+  +     + ++ +++     + E   +   +      L+E   DLEQ + 
Sbjct: 349 QSDLEQERLAKEKLQGQQSDLEQERLAKEKLQEQQSDLEQDRLAKEKLQEQQSDLEQERL 408

Query: 272 TFADEMSKLTILEKTREQKT 291
                  + + LE+ R  K 
Sbjct: 409 AKEKLQEQQSDLEQERRAKE 428



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 68/201 (33%), Gaps = 2/201 (0%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               DL++  +   +       S  + L  +    +++   +E    + L +  S   + 
Sbjct: 500 EQQSDLEQERLAKEKLQEQQSDSEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQE 559

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                    +   ++  R+    L     + +   L       Q+     + L ++    
Sbjct: 560 RLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQG 619

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQ 270
           Q    +QER+  +   E + ++ +++     + E   +     A    L+E   DLEQ +
Sbjct: 620 QQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLERTKASKETLQEQQSDLEQER 679

Query: 271 RTFADEMSKLTILEKTREQKT 291
                   + + LE+ R  K 
Sbjct: 680 LAKEKLQEQQSDLEQERRAKE 700



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 78/200 (39%), Gaps = 7/200 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 999  EQERLAKEKLQGQQSDLEQERLAKEKLQGQQSDLEQERLAKEKL---QEQQSDLEQERLA 1055

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    Q
Sbjct: 1056 KEKLQEQQSDLEQERLAKEKLQGQQSDLE-QERLAKEKLQGQQSDLE-QERLAKEKLQGQ 1113

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQR 271
                +QER+  +     + ++ +++     + E   +   E      L+E   DLEQ +R
Sbjct: 1114 QSDLEQERLAKEKLQGQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERR 1173

Query: 272  TFADEMSKLTILEKTREQKT 291
                   + + LE+T+  K 
Sbjct: 1174 AKEKLQEQQSDLERTKASKE 1193



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 70/208 (33%), Gaps = 7/208 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               + +  ++  ++  R   +  +     L  +    EK  E + +   +   K      
Sbjct: 884  RAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQRDLEQERRAKEKLQEQ 943

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNL 205
            +            L+ + + +    L +  L+ + S L     + +K          + L
Sbjct: 944  QSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERL 1003

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEIS 263
             ++    Q    +QER+  +     + ++ +++     + E   +   E      L+E  
Sbjct: 1004 AKEKLQGQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQ 1063

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
             DLEQ +        + + LE+ R  K 
Sbjct: 1064 SDLEQERLAKEKLQGQQSDLEQERLAKE 1091



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 73/200 (36%), Gaps = 7/200 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+     L +  S   +  
Sbjct: 438 EQERLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEK-----LQEQQSDLEQER 492

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                   +   ++  R+    L     +++   L       Q+     + L ++    Q
Sbjct: 493 LAKEKLQEQQSDLEQERLAKEKLQEQQSDSEQERLAKEKLQEQQSDLEQERLAKEKLQEQ 552

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQR 271
               +QER+  +   E + ++ +++     + E   +   E      L+    DLEQ + 
Sbjct: 553 QSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQGQQSDLEQERL 612

Query: 272 TFADEMSKLTILEKTREQKT 291
                  + + LE+ R  K 
Sbjct: 613 AKEKLQGQQSDLEQERLAKE 632



 Score = 43.5 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 76/200 (38%), Gaps = 7/200 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 914  EQERLAKEKLQEQQRDLEQERRAKEKLQEQQSDLEQERRAKEKL---QEQQSDLEQERLA 970

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    Q
Sbjct: 971  KEKLQEQQSDLEQERLAKEKLQEQQSDLE-QERLAKEKLQGQQSDLE-QERLAKEKLQGQ 1028

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQR 271
                +QER+  +   E + ++ +++     + E   +   E      L+    DLEQ + 
Sbjct: 1029 QSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQGQQSDLEQERL 1088

Query: 272  TFADEMSKLTILEKTREQKT 291
                   + + LE+ R  K 
Sbjct: 1089 AKEKLQGQQSDLEQERLAKE 1108



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 73/200 (36%), Gaps = 7/200 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +     K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      +  
Sbjct: 880  EQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKL---QEQQRDLEQERRA 936

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    Q
Sbjct: 937  KEKLQEQQSDLEQERRAKEKLQEQQSDLE-QERLAKEKLQEQQSDLE-QERLAKEKLQEQ 994

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQR 271
                +QER+  +     + ++ +++     +     +   E      L+E   DLEQ + 
Sbjct: 995  QSDLEQERLAKEKLQGQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQEQQSDLEQERL 1054

Query: 272  TFADEMSKLTILEKTREQKT 291
                   + + LE+ R  K 
Sbjct: 1055 AKEKLQEQQSDLEQERLAKE 1074



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 76/200 (38%), Gaps = 7/200 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +     K  ++  +  ++ E+ A + L  +   LE+   ++E+       +  S   ++ 
Sbjct: 472 EQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKL---QEQQSDSEQERLA 528

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    Q
Sbjct: 529 KEKLQEQQSDLEQERLAKEKLQEQQSDLE-QERLAKEKLQEQQSDLE-QERLAKEKLQEQ 586

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQR 271
               +QER+  +     + ++ +++     +     +   E      L+E   DLEQ + 
Sbjct: 587 QSDLEQERLAKEKLQGQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQEQQSDLEQERL 646

Query: 272 TFADEMSKLTILEKTREQKT 291
                  + + LE+T+  K 
Sbjct: 647 AKEKLQEQQSDLERTKASKE 666



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 75/200 (37%), Gaps = 7/200 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +   L K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 982  EQERLAKEKLQEQQSDLEQERLAKEKLQGQQSDLEQERLAKEKL---QGQQSDLEQERLA 1038

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    Q
Sbjct: 1039 KEKLQEQQSDLEQERLAKEKLQEQQSDLE-QERLAKEKLQGQQSDLE-QERLAKEKLQGQ 1096

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQR 271
                +QER+  +     + ++ +++     +     +   E      L+E   DLEQ + 
Sbjct: 1097 QSDLEQERLAKEKLQGQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQEQQSDLEQERL 1156

Query: 272  TFADEMSKLTILEKTREQKT 291
                   + + LE+ R  K 
Sbjct: 1157 AKEKLQEQQSDLEQERRAKE 1176



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 63/210 (30%), Gaps = 2/210 (0%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           LL    +     +   K++ +                  K     +  +  E+   + L 
Sbjct: 100 LLRNLGVSENIFLKENKLNKEGKLIEHIINDDDDKKKYIKGQDENRQEDLEEKAAKETLQ 159

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              S   +          +    +  R+    L     + +   L       Q+     +
Sbjct: 160 GQQSDLEQERLAKEKLQEQQSDSEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQE 219

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKE 261
            L ++    Q    +QER   +   E + ++ +++     + E   +   E      L+E
Sbjct: 220 RLAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKLQE 279

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
              DLEQ +        + + LE+ R  K 
Sbjct: 280 QQSDLEQERLAKEKLQEQQSDLEQERRAKE 309



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 74/200 (37%), Gaps = 7/200 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +     K  ++  +  ++ E+ A + L  +   LE+   ++E+       +      ++ 
Sbjct: 931  EQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKL---QEQQSDLEQERLA 987

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ +      +   + DLE +  L +  L   Q DL   + L ++    Q
Sbjct: 988  KEKLQEQQSDLEQERLAKEKLQGQQSDLE-QERLAKEKLQGQQSDLE-QERLAKEKLQEQ 1045

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQR 271
                +QER+  +   E + ++ +++     +     +   E      L+    DLEQ + 
Sbjct: 1046 QSDLEQERLAKEKLQEQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQGQQSDLEQERL 1105

Query: 272  TFADEMSKLTILEKTREQKT 291
                   + + LE+ R  K 
Sbjct: 1106 AKEKLQGQQSDLEQERLAKE 1125



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 69/208 (33%), Gaps = 7/208 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               + +  ++  ++  R   +  +     L  +    EK  E + +   + L K      
Sbjct: 952  RAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQGQ 1011

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNL 205
            +            L+ + + +    L +  L+ + S L     + +K          + L
Sbjct: 1012 QSDLEQERLAKEKLQGQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERL 1071

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEIS 263
             ++    Q    +QER+  +     + ++ +++     +     +   E      L+   
Sbjct: 1072 AKEKLQGQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQGQQ 1131

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
             DLEQ +        + + LE+ R  K 
Sbjct: 1132 SDLEQERLAKEKLQEQQSDLEQERLAKE 1159



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 69/208 (33%), Gaps = 7/208 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               + +  ++  ++  R   +  +     L  +    EK  E + +   + L K      
Sbjct: 935  RAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLAKEKLQEQQSDLEQERLAKEKLQEQ 994

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-----KNL 205
            +            L+ + + +    L +  L+ + S L     + +K          + L
Sbjct: 995  QSDLEQERLAKEKLQGQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQEQQSDLEQERL 1054

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF--ANYLKEIS 263
             ++    Q    +QER+  +     + ++ +++     +     +   E      L+   
Sbjct: 1055 AKEKLQEQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQGQQSDLEQERLAKEKLQGQQ 1114

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
             DLEQ +        + + LE+ R  K 
Sbjct: 1115 SDLEQERLAKEKLQGQQSDLEQERLAKE 1142



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 5/166 (3%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +     K  ++  +  ++ E+ A + L  +   LE+   + E+       +      +  
Sbjct: 1492 EQERRAKEKLQEQQSDLEQERRAKEKLQEQQSDLEQERLANEKL---QEQQRDLEQERRA 1548

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               +      L+ +      +   + DLE +      L    Q+     + L ++    Q
Sbjct: 1549 KEKLQEQQSDLEQERRAKEKLQEQQSDLEQERRAKEKL--QEQQSDLEQERLAKEKLQEQ 1606

Query: 214  NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                +QER+  +   E + ++ ++K   +   E   E     A  L
Sbjct: 1607 QRDLEQERLAKEKLQEQQRDLEQRKADTKKNLERKKEHGDVLAEDL 1652


>gi|5640166|emb|CAB51556.1| kinesin-II homologue [Tetrahymena thermophila]
          Length = 735

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 54/155 (34%), Gaps = 1/155 (0%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           + + + L   L +  S   K +   +  +    K++    + +    +D E +    R  
Sbjct: 399 DEKVKLLQQKLEQEKSEVEKKYQNEVKKIEEDKKLQEKEKQQLLQQLMDKEEREQKQREQ 458

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                K L  M+    +         ++ER + K+  EL++     + +   I    D A
Sbjct: 459 QEKLLKKLQKMQEKVIQGDEIMQKALEKERELNKAQQELQQRKERDRQIAEQIKRNEDLA 518

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            LE     +  + + +   +     + +L  +E  
Sbjct: 519 -LEINQKYRSQAEEAQDKTKRIKALVGRLKQIESE 552


>gi|59713926|ref|YP_206701.1| multidrug resistance protein A [Vibrio fischeri ES114]
 gi|59482174|gb|AAW87813.1| multidrug resistance protein A [Vibrio fischeri ES114]
          Length = 355

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 89/303 (29%), Gaps = 38/303 (12%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            QL+           + +   +     +L     +  S+  +     +     +   ++ 
Sbjct: 64  NQLVKKGELLFKIDDEKYLLAVQKAKIALAQAKEQEASLVADIEAARSNVKTTQVTANNA 123

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            ++   +K L    AVS + L+       ++   L     +   +   + +   ++    
Sbjct: 124 NREYHRIKRLANSGAVSASGLDSALTKRDQAAANLMAAKQKVHALEVKLGKGNGQS---- 179

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                 + L   E   E   +++   G I   Q      +A  +
Sbjct: 180 ---------------SAVLSAKNSLKQAELDLEHTQVVAQNEGIITNMQLH-VGVFANAN 223

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           QPL+  +P     ++ A    K    + KG  A V    Y  +  + F  I+E  D  ++
Sbjct: 224 QPLLTFIPTDS-LWVSADYREKATSEMVKGMRAEV---AYDAMPGEVFPLIVESRDYGVA 279

Query: 376 QQDNNLQTQ------------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
                   Q            +   V + +T        + +  G  A V+      ++ 
Sbjct: 280 SAQQKANGQLSSVEVSNRWVRDAQRVRVNLTSDEPLSPRLFV--GSRATVIIYTSGNSVI 337

Query: 424 QEI 426
             I
Sbjct: 338 DYI 340



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 62/203 (30%), Gaps = 18/203 (8%)

Query: 15  ASLKRMTLLSIIGIIGLITWS-ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
               R+ ++  + +   +  +  L P+       G ++      +I    SG I +    
Sbjct: 9   KQWMRILIVLFLIVTAYLVMADRLTPLTTQSKVQGFVV------QISPEVSGRIVEVNHT 62

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           N   + +G  L   +D         +K  +   +  I   ++     +   D+       
Sbjct: 63  NNQLVKKGELLFKIDD---------EKYLLAVQKAKIALAQAKEQEASLVADIEAARSNV 113

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +  Q+            K      +     L   LT+      N +  + K   L   L 
Sbjct: 114 KTTQVTANNANREYHRIKRLANSGAVSASGLDSALTKRDQAAANLMAAKQKVHALEVKLG 173

Query: 194 SHQKDLTMMKNLFEKNAVSQNDL 216
                 + +  L  KN++ Q +L
Sbjct: 174 KGNGQSSAV--LSAKNSLKQAEL 194


>gi|77458441|ref|YP_347946.1| secretion protein HlyD [Pseudomonas fluorescens Pf0-1]
 gi|77382444|gb|ABA73957.1| putative drug-efflux protein [Pseudomonas fluorescens Pf0-1]
          Length = 382

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 65/220 (29%), Gaps = 12/220 (5%)

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           ++N   +  V + +L  Q R       + +      +N+    +    +     +NY  +
Sbjct: 96  LQNTLRQAQVDEENLQAQRRATQAQLRQTKAIYERYQNLQEDASISRQDFETAQSNYEVQ 155

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLM 319
              +L            ++   +       I++PI G +V             SQ  P++
Sbjct: 156 -QANLMSLDAQIKSAHIQIDTAKVNLAYTRIVAPIDGDVVGI-VTQEGQTVIASQLAPVL 213

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
             +       ++A+V+   + H+  G                K +         +     
Sbjct: 214 LKLADLDTMTVKAQVSEADVIHIAPGQEVYFTILGEDKRYYGKLRGTDPAPQNFLEAPPA 273

Query: 380 NLQTQE---YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
               Q    +Y  +  +      + +  LR    A+V   
Sbjct: 274 GTPKQNTAVFYNALFDVP-----NPDHRLRISMTAQVRVV 308


>gi|58582267|ref|YP_201283.1| cation efflux system protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84624153|ref|YP_451525.1| putative cation efflux system protein [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|84368093|dbj|BAE69251.1| putative cation efflux system protein [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
          Length = 250

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 55/143 (38%), Gaps = 6/143 (4%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            + + +  LR +   Y  A       L     D++Q +    +  ++  +        T+
Sbjct: 114 AVAQSEAQLRKLENSYRRATQLVGQQLVSA-ADVDQLKFDVENSRAQHRLASLELSYTTV 172

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +PI+G I      +  N+ Q + P+ +IV           V  +++  +K G   T+  
Sbjct: 173 QAPISGVIASRSIKT-GNFVQINTPIFRIV-DDSQLEATLNVPERELATLKSGQPVTLLA 230

Query: 353 PHYADIREKKFKAIIEKIDPIIS 375
                   ++F   +++I P++ 
Sbjct: 231 DALP---GQQFVGKVDRIAPVVD 250



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 4/161 (2%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           + +  +        + +  SG+     VE G ++  G  L+  +       +   +  ++
Sbjct: 65  TGTSALEPRAEAQVV-AKTSGVALSVMVEEGQKVSAGQALVRLDPDRAHLAVAQSEAQLR 123

Query: 105 NLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            L   +    +     L +  DV +  F+    +    L     + + V    IS V  S
Sbjct: 124 KLENSYRRATQLVGQQLVSAADVDQLKFDVENSRAQHRLASLELSYTTV-QAPISGVIAS 182

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +K      I      + +  S L A L+  +++L  +K+
Sbjct: 183 RSIKTGNFVQINTPIFRIVDD-SQLEATLNVPERELATLKS 222


>gi|291541784|emb|CBL14894.1| hypothetical protein RBR_05000 [Ruminococcus bromii L2-63]
          Length = 848

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 69/208 (33%), Gaps = 15/208 (7%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             + +    +          I  ++  I +L   I   K  +D    +   L     + E
Sbjct: 342 DAVRKEEMEIRL------REIREREKKILDLTNEIKNLKVIIDQKEQQILTLRGRVSALE 395

Query: 136 EQLLDFLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +QL +   +   T  K+      I+ +    +     +  +     +L      L   + 
Sbjct: 396 DQLQEVKKELQQTKLKLMEAEKRIAELEEENQQLKDTIEELNKTIDELNQTIDTLNKKIV 455

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL---ELRENIHEQKNMLRHINELYDE 250
                + +   L ++NA  Q  + +QE ++ +      EL   + EQ   +  + E  ++
Sbjct: 456 ELNDRILV---LVQENARLQTKVKEQETVIAEQKAHIAELETQVAEQLAKITALTENLEK 512

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMS 278
            + +     ++I  DL        D + 
Sbjct: 513 CHAQIEEDARKI-TDLSDKNEKLTDTLQ 539



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 76/222 (34%), Gaps = 18/222 (8%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           V+    ++           E    +  +   I  L  +++   + ++    K   L    
Sbjct: 475 VKEQETVIAEQ---KAHIAELETQVAEQLAKITALTENLEKCHAQIEEDARKITDLSDKN 531

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E   + L     ++  T +K+         +        + S+     D E + +   A 
Sbjct: 532 EKLTDTLQTERIQHKETVNKMNADFAEEKQQMNDAHSAEVESLNHKFNDAEAEHNTYVAK 591

Query: 192 L------SSHQKDLTMMKNLFEKNAVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHI 244
           L       +++ +   +K L +K    +N+L +  E  +  S      +  E K   + +
Sbjct: 592 LNADFAAKANETEQKHLKELADKEEAHRNELVEIKEANLKSSAANDAAHASELKKAYKSV 651

Query: 245 NELYDEAN--------LEFANYLKEISRDLEQNQRTFADEMS 278
           ++  ++A          + A   KE   ++ + ++   +++S
Sbjct: 652 DKKVEQAEKACEKRMKAKVAEIKKEAQAEIRKAEKKAGEKIS 693


>gi|195144922|ref|XP_002013445.1| GL23404 [Drosophila persimilis]
 gi|194102388|gb|EDW24431.1| GL23404 [Drosophila persimilis]
          Length = 1624

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 75/207 (36%), Gaps = 3/207 (1%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +       +  K  SI+ L   ++ +  AL  L ++   L+   +  +E+L         
Sbjct: 1202 DLTRLQMALQEKDCSIRQLSERLENQNRALTQLEDRCTSLKSTVDQLKERLQKSAVSETQ 1261

Query: 148  TCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               ++      +S      +    +++ +  +    EN+  +L   L S Q +L  ++  
Sbjct: 1262 LRGEIKTLQKELSEQGHCSQANEDKLKLLQKSLQTAENEKRILTERLDSSQTNLNELRRS 1321

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQK-NMLRHINELYDEANLEFANYLKEISR 264
             +        L  Q   +      L   +   K N     ++     N   A   +E+SR
Sbjct: 1322 QQAQLDGNQRLQDQVTDLEVQRSALESQLRIAKWNQESGGDKGLSNGNGNGAGGEEELSR 1381

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
             L+ +QR  ++  SKL  L+   +Q  
Sbjct: 1382 QLKSSQREKSELRSKLQTLQDKVKQLE 1408



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 68/205 (33%), Gaps = 5/205 (2%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL--DFLGKYHSTCS 150
             + +   ++ +          +  L+    +   L+      +E+L   +          
Sbjct: 1137 RERLAQTEMQLAATSEENGQNEERLEKCRQQCSKLDNEKRQLQEELAKVEGRASKLDLQR 1196

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  ++ +  +L+ K   +R +     +     + L    +S +  +  +K   +K+A
Sbjct: 1197 VAMEGDLTRLQMALQEKDCSIRQLSERLENQNRALTQLEDRCTSLKSTVDQLKERLQKSA 1256

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEISRDLE 267
            VS+  L  + + + K   E        ++ L+ + +    A  E       L     +L 
Sbjct: 1257 VSETQLRGEIKTLQKELSEQGHCSQANEDKLKLLQKSLQTAENEKRILTERLDSSQTNLN 1316

Query: 268  QNQRTFADEMSKLTILEKTREQKTI 292
            + +R+   ++     L+       +
Sbjct: 1317 ELRRSQQAQLDGNQRLQDQVTDLEV 1341



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 81/214 (37%), Gaps = 14/214 (6%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
           + +D+ T       ++   ++    ++     + L   Y  L+K  +S EE       + 
Sbjct: 566 SLDDVRTQKQ--QSEMGRADINNAFESLSGEYEKLQLNYGKLQKRLDSMEEDKKAVELEI 623

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                      ++   RS + + +R+R   ++  +  N+ SL R LL   + +   +  L
Sbjct: 624 QRILKDKNITELN--LRSEEDRSSRLREETISLREELNRVSLNRDLLEQQRIESDNLICL 681

Query: 206 FEKNAVSQNDL-NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE------FANY 258
            EK    ++DL  + E  + K  L+L     E+  + R   EL  E  L+        N 
Sbjct: 682 LEKQ---KSDLEIKLEECIRKQELQLCSIREERDTLCRVSEELKMEIRLKEDKMDGTNNE 738

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           L++  R  ++ +        +LT   +      I
Sbjct: 739 LQDALRKTKEGEGFIDSLRKELTDSRRQLADSNI 772


>gi|91776917|ref|YP_546673.1| secretion protein HlyD [Methylobacillus flagellatus KT]
 gi|91710904|gb|ABE50832.1| secretion protein HlyD [Methylobacillus flagellatus KT]
          Length = 401

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/319 (11%), Positives = 90/319 (28%), Gaps = 19/319 (5%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                 R +   E       ++     E+  E  +  ++       S    V      + 
Sbjct: 25  ADTDRARENDGAEHRVQAANSHGRQAEERGGEHEDGAIVQLSSAQISAAGLVIAQAGPAR 84

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             +       +R        +  +   +   ++           +    A       +  
Sbjct: 85  ILTTLTLPGEIRFNEDRTAHIVPRVDGIVESVAVDLGQQVKKGQVLATLASPGISELRSN 144

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
            +  +  L L   ++E++  L       ++  L+    L+E    ++   +      +  
Sbjct: 145 AMAAQKRLALARKVYEREKELWEDRISAEQDYLQALQALQEAEITVQNASQKLRAIGA-- 202

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
                   +  + +P  G IV  +  +     Q +  +M +       +    V+ K + 
Sbjct: 203 GDGGGNLNRYELRAPFDGMIVE-RHLALGESVQANTNVMTLA-DLSSVWAEIIVSAKDLD 260

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSD 400
            VK G T TVR   +    +     ++  +  ++ +Q             + + + A + 
Sbjct: 261 TVKVGSTVTVRAAAFESQAQ----GVVAYVGSLLGEQTRTAT------ARVTLPNPARAW 310

Query: 401 NNIELRNGFPAEVLFTAKN 419
                R G    V   A  
Sbjct: 311 -----RPGLFVNVAIVAGE 324



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 11/96 (11%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           GI++   V+ G Q+ +G  L T                I  LR +    +  L      Y
Sbjct: 111 GIVESVAVDLGQQVKKGQVLATL-----------ASPGISELRSNAMAAQKRLALARKVY 159

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  ++ +E R     D+L    +          +S 
Sbjct: 160 EREKELWEDRISAEQDYLQALQALQEAEITVQNASQ 195


>gi|254255155|ref|ZP_04948471.1| Multidrug resistance efflux pump [Burkholderia dolosa AUO158]
 gi|124900892|gb|EAY71642.1| Multidrug resistance efflux pump [Burkholderia dolosa AUO158]
          Length = 327

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 61/175 (34%), Gaps = 9/175 (5%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q      +R+   +  + R  + + +   R         NL  +  ++E    +EQ 
Sbjct: 77  VIDQARYALAQRLAEATLAQRRATLAQAR---REYARNMQLGNLVASEQVEESRTRVEQG 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   AD    L   +   ++ TI+SP+ G  + +++     +A   + ++ +V   +   
Sbjct: 134 EAAVADAQVSLDTAKLNLQRTTIVSPVDGY-LNDRAPRVGEFAPAGRAVLSVV-DRQSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +       +++ +  G    +             +  ++ I   I  +D      
Sbjct: 192 VDGYFEETKLRGIHIGQPVDIVVMGEPH----PLRGHVQSIVAAIEDRDRTQGAN 242



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 42/118 (35%), Gaps = 6/118 (5%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +V+++    SG+I   QV +  ++ +G  L   +         L + ++   R  + 
Sbjct: 43  VRADVIQVAPDVSGLITSVQVADNQEVRRGQVLFVIDQARYALAQRLAEATLAQRRATLA 102

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
             +          +++        EQ+ +   +     + V +  +S     L ++ T
Sbjct: 103 QARREYARNMQLGNLVAS------EQVEESRTRVEQGEAAVADAQVSLDTAKLNLQRT 154


>gi|330992755|ref|ZP_08316699.1| Multidrug resistance protein mdtA [Gluconacetobacter sp. SXCC-1]
 gi|329760233|gb|EGG76733.1| Multidrug resistance protein mdtA [Gluconacetobacter sp. SXCC-1]
          Length = 384

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/107 (11%), Positives = 38/107 (35%), Gaps = 3/107 (2%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G ++   NV  ++S   G + +     G ++ +G  L   +       +      +   +
Sbjct: 66  GTVIPVTNV-TVQSRVDGYLTQVLFTEGQEVHEGDLLAVIDPRPYEAELKQYSGQLAADQ 124

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +D  ++ +D +  +  +   + +++  Q   +  K      +   
Sbjct: 125 AQLD--EARMDNIRYQKLLKRDSIDTQTAQDQQYKVKQLEGTVEADQ 169


>gi|293602285|ref|ZP_06684732.1| cation efflux system protein CzcB [Achromobacter piechaudii ATCC
           43553]
 gi|292819314|gb|EFF78348.1| cation efflux system protein CzcB [Achromobacter piechaudii ATCC
           43553]
          Length = 492

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/348 (14%), Positives = 100/348 (28%), Gaps = 39/348 (11%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF--------ESREEQLLD 140
           D+  T  +       K L+    TE    D L  +    E           +    +L  
Sbjct: 90  DLTATATLKRPNGEEKVLKLTPSTEGFVSDQLIAEPHFFEVEISVSIPGRPDPIRAELHK 149

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             G    T  ++   GI +     +   +  +     R + +  + ++     + Q+   
Sbjct: 150 EEGLVALTPEQISAAGIETSEAKAQSLESSTKFPGEIRFNADRTAHVVPKAAGTVQQVSA 209

Query: 201 MMKNLFEKN----AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +    +K      +S   L++       +T             L+   E          
Sbjct: 210 DLGQEVKKGQLLAVISSASLSELRSEWLAATKRRALAAATHARELKLWREQVS-----AQ 264

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTIL-----EKTREQKTILSPIAGTIVYNQSFSSSNY 311
              ++    L++      +   KL  +      K      I +P  G IV     +    
Sbjct: 265 QDYQQAQTALQEADIAVQNAAQKLRAIGAEPSAKDLNLLEIRAPFDGVIVEKHI-ALGEA 323

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
              +  +  I       +    + PK ++ V+ G  A V    +++    +    +  I 
Sbjct: 324 LSDTASIFTIS-DLSTVWAEFVIAPKDLRDVRVGEDAKVTSTAFSE----EAFGTVSYIG 378

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            ++ QQ           V LK  D+A+       R G    V    + 
Sbjct: 379 ALLGQQTRTATA----RVTLKNPDMAW-------RPGLFVSVSVVVER 415


>gi|154335920|ref|XP_001564196.1| kinesin [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134061230|emb|CAM38252.1| putative kinesin [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 1097

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 78/230 (33%), Gaps = 17/230 (7%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            +          +    +NLR  +D  +  +  L  + +      ES   + +    +  
Sbjct: 635 LDPTTRAKEDQQRAKKEENLRKQLDKAQMTVAELKAELERRVATIESESLKAMREALQKQ 694

Query: 147 STCSKVFNYGISSVYR--------SLKMKLTRMRSIYLNRL------DLENKSSLLRALL 192
                V   G+S  +R         + M L R +   L R            ++ +  +L
Sbjct: 695 EARLAVVATGVSLYHRVLPHFDDIDIVMALVREKETLLQRACEDILDTNTESAAAVEKML 754

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDL--NQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              + DL   K L E+   +Q +    + +    ++  + ++ +   ++ +  + E    
Sbjct: 755 REREHDLRETKRLHEEKLAAQAERFCTRLKEASDENAAQQQQLLDRHRDAIAQLEERLQR 814

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           +  E +    + S + ++  +       +    E  +E + + + + G I
Sbjct: 815 SR-EISEIELKRSEEAKEQLKQRMQVAQERMRHEYQQEIERLRARLDGDI 863



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 73/219 (33%), Gaps = 17/219 (7%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDT----EKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
             +    +    +  I+ LR  +D        ++D L    ++ E+     ++++      
Sbjct: 838  QVAQERMRHEYQQEIERLRARLDGDIGDRHKSVDALRQLQEMHEREATRLKDEMDHLRRS 897

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH----QKDLT 200
              S C+++ N   +   R     + + R   L R ++++    +  L        ++   
Sbjct: 898  RDSDCARLQNQLENERLRRESDLMEKDRQARLVRNEVDDAKRAIDKLNDEKGKMEKEYQD 957

Query: 201  MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML---------RHINELYDEA 251
             ++ L ++        N         + EL  ++H+ + +L         + I E+    
Sbjct: 958  QIRGLMQQQEQLVTASNAVLSGWENKSSELEADLHKLRALLYDRDYMHFRQKIREMAFMD 1017

Query: 252  NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +F   L+E+              +SK       + + 
Sbjct: 1018 RSDFDQKLQELDEKERLQAARINQIISKARRAYDEQSRS 1056


>gi|301768387|ref|XP_002919614.1| PREDICTED: LOW QUALITY PROTEIN: kinesin-like protein KIF7-like
           [Ailuropoda melanoleuca]
          Length = 1254

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 67/234 (28%), Gaps = 26/234 (11%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            V  G        L    + + +  I   +   + +R  +   +  L  L  K    E  
Sbjct: 629 LVRTG---KAAQAL----NRQHSQHIRELEQEAEQVRAELSESQRQLRELEGK----EPR 677

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                 QL +F  +  +  S+V               L+      L   +LE    L+R 
Sbjct: 678 DAGERSQLQEFRKRVAAAQSQVQVLREKKQATERLASLSAQSEKRLQ--ELERHVQLMRQ 735

Query: 191 LLSSHQKDL----TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                QK L       + L  +    Q+ + + ER   +    L+    E     R    
Sbjct: 736 QQGQLQKRLREETEQKRRLETEMNKRQHRVKELERRHEQQQKILKIKTEEIAAFQRKRRS 795

Query: 247 ---------LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                       +   E   +L +    + Q +R   +   +L   E    +K 
Sbjct: 796 GSNGSVVSLEQQQKIEEQKKWLDQEMEKVLQQRRALEELGEELHKREAILAKKE 849



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 77/252 (30%), Gaps = 18/252 (7%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQ-----GTPLLTFEDIETTDLIDLKKV 101
           +G+     N    +      I++ + +   Q+          L   E  E  D  +  + 
Sbjct: 632 TGKAAQALNRQHSQH-----IRELE-QEAEQVRAELSESQRQLRELEGKEPRDAGE--RS 683

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEK-----AFESREEQLLDFLGKYHSTCSKVFNYG 156
            ++  R  +   +S +  L  K    E+     A   +  Q L+   +            
Sbjct: 684 QLQEFRKRVAAAQSQVQVLREKKQATERLASLSAQSEKRLQELERHVQLMRQQQGQLQKR 743

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +       +   T M        +LE +    + +L    +++   +      +      
Sbjct: 744 LREETEQKRRLETEMNKRQHRVKELERRHEQQQKILKIKTEEIAAFQRKRRSGSNGSVVS 803

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            +Q++ + +    L + + +     R + EL +E +   A   K+ +   E+        
Sbjct: 804 LEQQQKIEEQKKWLDQEMEKVLQQRRALEELGEELHKREAILAKKEALMQEKTGLESKRL 863

Query: 277 MSKLTILEKTRE 288
            S   + E    
Sbjct: 864 RSSQALSEDIVR 875


>gi|294674518|ref|YP_003575134.1| acriflavine resistance protein A [Prevotella ruminicola 23]
 gi|294473874|gb|ADE83263.1| acriflavine resistance protein A [Prevotella ruminicola 23]
          Length = 396

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/101 (12%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 56  VVEIK--SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE 113
           V +++     +G I +  V+ G  +  G  L   +++     +   + S+   +  ++T 
Sbjct: 60  VQDVQISPKVAGFITQVNVKEGQTVSAGQVLFVIDNVTYQAQVRQAQASVNTAKASLNTA 119

Query: 114 KSALD-FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           K + +       + +   FE ++        K     ++  
Sbjct: 120 KLSYENAQKLHENGVIGDFELQQATNQYEQAKATVAQAEAL 160



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 58/180 (32%), Gaps = 19/180 (10%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q  + Q +  V  +   L       +N      +   E  +     L++ +   EQ + T
Sbjct: 99  QAQVRQAQASVNTAKASLNTAKLSYENA-----QKLHENGVIGDFELQQATNQYEQAKAT 153

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA 332
            A   + L   ++      + SP AG +V    +           ++  V ++       
Sbjct: 154 VAQAEALLASNKEMLSYCYVKSPAAG-VVGTLPYKVGALVSTG-NVLTTVSNNSSM--EV 209

Query: 333 KVTPKQIQHVKK-----GYTATV-RFPH----YADIREKKFKAIIEKIDPIISQQDNNLQ 382
             +  +   ++      G  A V +FP      AD         + K+  +I     ++Q
Sbjct: 210 YFSVTEKDALEMSKGEGGQNAAVSKFPPVKLKLADGTLYNLDGTVTKMSGVIDAATGSVQ 269


>gi|294139941|ref|YP_003555919.1| HlyD family secretion protein [Shewanella violacea DSS12]
 gi|293326410|dbj|BAJ01141.1| HlyD family secretion protein [Shewanella violacea DSS12]
          Length = 369

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 73/203 (35%), Gaps = 21/203 (10%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           +  +  +++  + ++     + + ++ E K  L+   +   +  L+  +       +++ 
Sbjct: 82  HVTANQEVHAGQLLIQLEDAKPQASVSEAKAYLKD-EQRKLKEYLKLIDRNAITQTEIDA 140

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK-- 326
            + +     ++L   +   E   I +P +GT      FS          L+ +       
Sbjct: 141 QRASVDIATARLGSAKAELEFNYIKAPFSGTA-GLLDFSLGAMVTAGSELLSL---DDLS 196

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              +  +V    +  +  G T T     + D     F   +  ID  I+Q+  NL     
Sbjct: 197 SMRVDLQVPENYLSMLSVGMTVTATSRAWPDS---AFTGHVMAIDSRINQETLNL----- 248

Query: 387 YEVILKITDLAFSDNNIELRNGF 409
            +V +K     F + + +L+ G 
Sbjct: 249 -KVRVK-----FDNTDHKLKPGM 265



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 49/131 (37%), Gaps = 5/131 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +  ++S  G++  + +V  I    +G IK   V    ++  G  L+  ED +    +  
Sbjct: 51  QLSQTISLVGKLQADKSV-YISPEVAGKIKVIHVTANQEVHAGQLLIQLEDAKPQASVSE 109

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            K  +K+ +  +      +D    +  + +   +++   +     +  S  +++    I 
Sbjct: 110 AKAYLKDEQRKLKEYLKLID----RNAITQTEIDAQRASVDIATARLGSAKAELEFNYIK 165

Query: 159 SVYRSLKMKLT 169
           + +      L 
Sbjct: 166 APFSGTAGLLD 176


>gi|153823828|ref|ZP_01976495.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|126518652|gb|EAZ75875.1| conserved hypothetical protein [Vibrio cholerae B33]
          Length = 342

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 21/206 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S   + + + +V   +   R N+   +  L      Y+     FA          ++ + 
Sbjct: 61  SGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKG-SISKESYDEAEA 119

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           ++    + +  L+ T  ++ I +P AG I     F    Y Q       IV     + +R
Sbjct: 120 SYYALSADIESLKATIARREIKAPFAGVIGIRNVF-LGQYLQPGT---DIVRLEDTSVMR 175

Query: 332 AK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
            +  V  + I  +       +    Y       FK  I  I+P +S Q   +Q Q     
Sbjct: 176 LRFTVPQRDISRISLDQEVDIFVDAYPQT---SFKGSISAIEPAVSVQSGLIQVQ----- 227

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
                     +++ +LR+G  A    
Sbjct: 228 ------ADIPNSDGKLRSGMFARANI 247



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 52/138 (37%), Gaps = 1/138 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +   E+G+Q+ +  PL+  +       +   +  +   +   +  K      +   
Sbjct: 52  GVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKGSISK 111

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  ++A  S      D      +   +      + V     + L +      + + LE+ 
Sbjct: 112 ESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLED- 170

Query: 185 SSLLRALLSSHQKDLTMM 202
           +S++R   +  Q+D++ +
Sbjct: 171 TSVMRLRFTVPQRDISRI 188


>gi|27367123|ref|NP_762650.1| multidrug resistance efflux pump [Vibrio vulnificus CMCP6]
 gi|27358691|gb|AAO07640.1|AE016810_143 Multidrug resistance efflux pump [Vibrio vulnificus CMCP6]
          Length = 360

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/229 (10%), Positives = 75/229 (32%), Gaps = 23/229 (10%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + Q+++          + ++  + +    L++    + +        + +     A  ++
Sbjct: 140 DNQIVNAGDLLFRIDPRNYDIALRAAQAELELVGQSIGANTAAVEVAQARVVEALAARNN 199

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++     + L ++  +S+ DL+       ++   L           +++    +     
Sbjct: 200 AREQAARTETLAKRGVLSKADLDNALESKTRAQAGLEAAEAALVQAKQNLGPAGN----- 254

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                         N       M+KL   +   ++  + +P  G +   Q  ++   A  
Sbjct: 255 --------------NNPQILAAMAKLEKAQLDLQKTNVTAPSKGVVTNVQL-TNGQRANA 299

Query: 315 SQPLMK-IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
             PL+  I P     +I A++    ++H+++G    +           +
Sbjct: 300 GTPLLTFIDPRG--VWISAQLRENSLEHIREGQRVDIVLDALPGRVSPE 346



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 77/227 (33%), Gaps = 11/227 (4%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L  +  +S +++++  I  I+ +  +S+    +     +        +V+I    +G I 
Sbjct: 77  LMSDTQSSSRKLSIYIITTILVIWLYSLWA--DRVTPITSSARIHSYLVQIAPEVTGNII 134

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-YDVL 127
              V +   +  G  L   +       +   +  ++ +   I    +A++    +  + L
Sbjct: 135 DVSVSDNQIVNAGDLLFRIDPRNYDIALRAAQAELELVGQSIGANTAAVEVAQARVVEAL 194

Query: 128 EKAFESREEQL-LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL----E 182
                +RE+    + L K         +  + S  R+         ++   + +L     
Sbjct: 195 AARNNAREQAARTETLAKRGVLSKADLDNALESKTRAQAGLEAAEAALVQAKQNLGPAGN 254

Query: 183 NKSSLLRALLSSHQKDLTMMKNLF---EKNAVSQNDLNQQERIVYKS 226
           N   +L A+    +  L + K       K  V+   L   +R    +
Sbjct: 255 NNPQILAAMAKLEKAQLDLQKTNVTAPSKGVVTNVQLTNGQRANAGT 301


>gi|71276118|ref|ZP_00652398.1| Secretion protein HlyD [Xylella fastidiosa Dixon]
 gi|71898381|ref|ZP_00680554.1| Secretion protein HlyD [Xylella fastidiosa Ann-1]
 gi|71163036|gb|EAO12758.1| Secretion protein HlyD [Xylella fastidiosa Dixon]
 gi|71731904|gb|EAO33962.1| Secretion protein HlyD [Xylella fastidiosa Ann-1]
          Length = 411

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 43/135 (31%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            ++ G +    N V I    SG +       G  + +G  L   +        D    + 
Sbjct: 63  AAAPGTV-AAMNTVTINPQVSGQLISLHFREGESVKKGQLLAEIDARALQASYDQAAAAK 121

Query: 104 KNLRCHIDTEKS---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T ++       L  +  V +   +++  Q+  +     +  + +    +   
Sbjct: 122 RQNQALLATARANYTRSSTLEYQPYVAKTELDTQYNQVTQYEAAVAANEAAMRAAQVQLQ 181

Query: 161 YRSLKMKLTRMRSIY 175
           Y  +   +  +  I 
Sbjct: 182 YTKIVAPIDGVAGIR 196


>gi|196233388|ref|ZP_03132232.1| efflux transporter, RND family, MFP subunit [Chthoniobacter flavus
           Ellin428]
 gi|196222528|gb|EDY17054.1| efflux transporter, RND family, MFP subunit [Chthoniobacter flavus
           Ellin428]
          Length = 361

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 54/202 (26%), Gaps = 20/202 (9%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           +   +R    + +E  +   E+       +       L         + + E  Q     
Sbjct: 97  VLLTDRDSANTEIEGAKLAMEKAKKNYERSRDLFHQKLVSQEVFDNTTAEYEIAQNDLVK 156

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHSKLTY 329
              KL  ++       +++   GT++                      LM I    +   
Sbjct: 157 AQKKLQQVDDQLHFARVVASGDGTVLTVPVV-EGQVIIAAASVNSGTTLMTIA-DLRKLL 214

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
           ++  +    +  ++      +R     D+   + +A I  I P+ +  +N          
Sbjct: 215 VQTHINQVDVARLELSQPVKLRAESLKDL---EMEATISFIAPVATITNNVKGFDV---- 267

Query: 390 ILKITDLAFSDNNIELRNGFPA 411
                       N  LR G   
Sbjct: 268 -----QAMIEKPNPRLRPGMTV 284



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 71/206 (34%), Gaps = 12/206 (5%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+ SV  SG+++    + ++K+   G +KK  V  G  + +G  L   +D       D  
Sbjct: 47  IDFSVEVSGDVMPVTQL-DVKAEVGGKVKKLHVLPGQTVKKGDLLAEIDDSVLLTDRDSA 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNN---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              I+  +  ++  K   +   +   +  V ++ F++   +             K+    
Sbjct: 106 NTEIEGAKLAMEKAKKNYERSRDLFHQKLVSQEVFDNTTAEYEIAQNDLVKAQKKLQQVD 165

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
               +  +         + +  ++ +   +       +    +  ++ L  +  ++Q D+
Sbjct: 166 DQLHFARVVASGDGT-VLTVPVVEGQVIIAAASVNSGTTLMTIADLRKLLVQTHINQVDV 224

Query: 217 NQQE-------RIVYKSTLELRENIH 235
            + E       R      LE+   I 
Sbjct: 225 ARLELSQPVKLRAESLKDLEMEATIS 250


>gi|192291801|ref|YP_001992406.1| efflux transporter RND family, MFP subunit [Rhodopseudomonas
           palustris TIE-1]
 gi|192285550|gb|ACF01931.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
           palustris TIE-1]
          Length = 399

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/118 (12%), Positives = 46/118 (38%), Gaps = 2/118 (1%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            VEI+S  +G +++ Q   G+ + +G  L+  +       +D  +  +   R  +   K+
Sbjct: 74  RVEIRSRVAGAVQQIQFREGALVNKGDLLVRIDPSLYAAEVDRAQAQLSAARARVVFTKA 133

Query: 116 ALDFLN--NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            ++     +   + ++  ++R     +      S  + +    ++  Y  +   ++  
Sbjct: 134 DVERSQQLSSSSITQREVDNRLNAYREAEANLRSAEAALKTAELNLSYTEISAPVSGR 191



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/148 (10%), Positives = 46/148 (31%), Gaps = 13/148 (8%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN----AVSQNDLNQQERIVYKST 227
           R   + R+++ ++ +     +   +  L    +L  +       ++ D  Q +    ++ 
Sbjct: 68  RLEAIERVEIRSRVAGAVQQIQFREGALVNKGDLLVRIDPSLYAAEVDRAQAQLSAARAR 127

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           +   +   E+   L   +    E +     Y         + +       + L   E   
Sbjct: 128 VVFTKADVERSQQLSSSSITQREVDNRLNAY--------REAEANLRSAEAALKTAELNL 179

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQS 315
               I +P++G +   +  +  N     
Sbjct: 180 SYTEISAPVSGRVGKVEI-TVGNLIAAG 206


>gi|78064880|ref|YP_367649.1| HlyD family secretion protein [Burkholderia sp. 383]
 gi|77965625|gb|ABB07005.1| Secretion protein HlyD family [Burkholderia sp. 383]
          Length = 401

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/280 (11%), Positives = 78/280 (27%), Gaps = 41/280 (14%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
            + T      Y +     ++  K                K   + A L S   + ++ + 
Sbjct: 63  QNDTQLNATGYVVPQRKAAVASKGQGRVEWLGVLEGTRVKKDEIIARLESRDVEASLAQA 122

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L +   V++ +L  ++  +  + + LR              +L  +        + +   
Sbjct: 123 LAQVK-VARANLGVEQAELKDAEIALRRTSVLAPKGAVPAAQLDTDTA-----RVNKARA 176

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-------------SSSNY 311
            +  +Q       +     +   +Q  I +P  G ++   +              S    
Sbjct: 177 SVNSDQAAITSAEANAQAAQVAVDQTVIRAPFDGIVLAKHANVGDNITPFSSASDSKGAV 236

Query: 312 AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
                 +  +        + A V    I  ++      ++     D R   F   + +I 
Sbjct: 237 V----TIADM----DTLEVEADVAESNIAKIRAEQPCEIQLDALPDTR---FAGRVSRIV 285

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
           P + +    +       V ++     F D +  +     A
Sbjct: 286 PTVDRSKATV------LVKVR-----FVDRDDRVLPDMSA 314



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 15/121 (12%), Positives = 45/121 (37%), Gaps = 4/121 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  ++++G ++ +     + S   G ++   V  G+++ +   +   E  +    +    
Sbjct: 65  DTQLNATGYVVPQRKA-AVASKGQGRVEWLGVLEGTRVKKDEIIARLESRDVEASLAQAL 123

Query: 101 VSIKNLRCHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +K  R ++  E++ L   +    +  VL         QL     + +   + V +   
Sbjct: 124 AQVKVARANLGVEQAELKDAEIALRRTSVLAPKGAVPAAQLDTDTARVNKARASVNSDQA 183

Query: 158 S 158
           +
Sbjct: 184 A 184


>gi|15677563|ref|NP_274719.1| membrane fusion protein [Neisseria meningitidis MC58]
 gi|7226971|gb|AAF42063.1| membrane fusion protein [Neisseria meningitidis MC58]
 gi|316985727|gb|EFV64672.1| periplasmic linker protein [Neisseria meningitidis H44/76]
 gi|325140823|gb|EGC63333.1| membrane fusion protein MtrC [Neisseria meningitidis CU385]
 gi|325199692|gb|ADY95147.1| membrane fusion protein MtrC [Neisseria meningitidis H44/76]
          Length = 412

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 57/170 (33%), Gaps = 2/170 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GII+K   + GS +  G PL   +       ++  +  +   +  +   K+  D
Sbjct: 75  VRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEAGLESARAQLATAQATLA--KADAD 132

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  V  +A   +E        +      K     I S   SL              
Sbjct: 133 LARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQAAIKSAGISLNRSRITAPISGFIG 192

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               ++ +LL A  ++    +     ++     S +++ +  R + +  L
Sbjct: 193 QSKVSEGTLLNAGDATVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKL 242


>gi|49476202|ref|YP_034243.1| hypothetical protein BH15470 [Bartonella henselae str. Houston-1]
 gi|49239010|emb|CAF28310.1| hypothetical protein BH15470 [Bartonella henselae str. Houston-1]
          Length = 408

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 76/220 (34%), Gaps = 30/220 (13%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L +QE     + L L +   E++  +  +  +      + A  +K     + Q ++    
Sbjct: 123 LLEQE-----AYLALAQKNLERQKKMIGVRAISRAELDDAATQVKIREAQVAQLRQQIIQ 177

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAK 333
               +   E       I++P AGT++              Q    IV         ++A+
Sbjct: 178 AQIDVDSAEVNLGYTRIIAPSAGTVLA-TVVEEGQNVNAVQSAPTIVILGDLSKMTVKAQ 236

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE-------- 385
           ++   I  V+ G +  + F    +  +++++ ++E+++P       ++            
Sbjct: 237 ISEADILKVQPGQS--LYFTVLGNS-QRRYEGVLERVEPAPESIRADVSINPGMVGGSSA 293

Query: 386 ------YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 YY  I+ +      + +  LR    A+V      
Sbjct: 294 LVSSAIYYNGIVHVD-----NADNFLRTYMTAQVHIILGR 328



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 55/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE S+ +SG +     +V + +  +G +   +V  GS + +G  L   +  +  + +  K
Sbjct: 54  IEESILASGLVRPY-RLVAVGARTTGRVVSMRVFPGSIVKEGDLLAEIDPTDQENDLKRK 112

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           K ++ +    +  +++ L       +  +K    R     +      +T  K+    ++ 
Sbjct: 113 KAALSHYYASLLEQEAYLALAQKNLERQKKMIGVRAISRAELDDA--ATQVKIREAQVAQ 170

Query: 160 VYRSLKMKLTRMRSIYLN 177
           + + +      + S  +N
Sbjct: 171 LRQQIIQAQIDVDSAEVN 188


>gi|118581333|ref|YP_902583.1| RND family efflux transporter MFP subunit [Pelobacter propionicus
           DSM 2379]
 gi|118504043|gb|ABL00526.1| efflux transporter, RND family, MFP subunit [Pelobacter propionicus
           DSM 2379]
          Length = 455

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 19/191 (9%)

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           EL     E    L+  ++L D      +   + +     Q    F    S++  LEK  +
Sbjct: 170 ELVATQLEYLLALKSRDQLKDSPIPSISQNGEGLVASARQRLLLFGVRESQIAALEKAGK 229

Query: 289 ---QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
              +  I +P++G ++         Y      L  I       +I   +    +  V+ G
Sbjct: 230 PNIRLPIYTPLSGVVIEKMV-QQGQYVNVGDVLFTIA-DLSTVWIELDIYEPDLAIVRVG 287

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIEL 405
               +  P ++          I  ++P +  +   +      +  ++      ++  + L
Sbjct: 288 QRVEIHSPSFS---GGTLSGRIALVNPFLDPRSRTV------KARVE-----MANPGMRL 333

Query: 406 RNGFPAEVLFT 416
           +       L  
Sbjct: 334 KPDMFVSALIR 344


>gi|330892055|gb|EGH24716.1| secretion protein hlyd [Pseudomonas syringae pv. mori str. 301020]
          Length = 349

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 68/213 (31%), Gaps = 24/213 (11%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + + +L + + +V +S   L     E         +    +    +  ++E        +
Sbjct: 81  IPRAELRKNQALVAQSRANL-----ELARANYRRAQETAHSGSVSSQQVEEYRITQATAE 135

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
            +    ++ L   +    Q  IL+     I   +S +    A     L +++        
Sbjct: 136 ASLGSALADLDSSKVKLSQTRILATDDARIAS-KSGTLGEVAASGSELYRMI-RDDKLEW 193

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           RA+V  +Q+  +++G  A V+ P       +     + K+  II              V 
Sbjct: 194 RAEVDARQLGSIEEGQEAHVQLP-----DGRTIDGEVRKVGSIIDADTGRA------IVY 242

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           + I + A +      R+G  A            
Sbjct: 243 VSIPEKASA------RSGMFAAGRIELGVRPAL 269


>gi|258625850|ref|ZP_05720725.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258581814|gb|EEW06688.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 368

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 71/208 (34%), Gaps = 25/208 (12%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQN 269
           S   +++ + +V   +   + N+   +  L      Y+     FA  +  KE   + E N
Sbjct: 87  SGTQVSKNQPLVLLDSAVEKANLKSAEARLPAAKAKYERYKGLFAKGSISKESYDEAEAN 146

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               A ++  L     +  ++ I +P AG I     F    Y Q       IV     + 
Sbjct: 147 YYALAADIESLKA---SIARREIKAPFAGVIGIRNVF-LGQYLQPGT---DIVRLEDTSV 199

Query: 330 IRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
           +R +  V    I  +       +    Y       FK  I  I+P +S Q   +Q Q   
Sbjct: 200 MRLRFTVPQTDISRISLNQEVDIFVDAYPQT---SFKGSISAIEPAVSVQSGLIQVQ--- 253

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLF 415
                       +++ +LR+G  A    
Sbjct: 254 --------ANIPNSDGKLRSGMFARANI 273



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 48/141 (34%), Gaps = 1/141 (0%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G I     V  + S  SG+I +   E+G+Q+ +  PL+  +       +   +  
Sbjct: 57  VIEAIGFIEPNQGV-TLTSETSGVIDQISFESGTQVSKNQPLVLLDSAVEKANLKSAEAR 115

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   +   +  K      +   +  ++A  +      D      S   +      + V  
Sbjct: 116 LPAAKAKYERYKGLFAKGSISKESYDEAEANYYALAADIESLKASIARREIKAPFAGVIG 175

Query: 163 SLKMKLTRMRSIYLNRLDLEN 183
              + L +      + + LE+
Sbjct: 176 IRNVFLGQYLQPGTDIVRLED 196


>gi|225076848|ref|ZP_03720047.1| hypothetical protein NEIFLAOT_01899 [Neisseria flavescens
           NRL30031/H210]
 gi|224951834|gb|EEG33043.1| hypothetical protein NEIFLAOT_01899 [Neisseria flavescens
           NRL30031/H210]
          Length = 1161

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +++    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQMQRIHQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|163792738|ref|ZP_02186715.1| secretion protein HlyD [alpha proteobacterium BAL199]
 gi|159182443|gb|EDP66952.1| secretion protein HlyD [alpha proteobacterium BAL199]
          Length = 396

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 45/121 (37%), Gaps = 3/121 (2%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DT 112
            VE++S  SG +     ++G  + +G  L T +           K  + N +  +   D 
Sbjct: 68  RVELRSRVSGYLDVVHFQDGQLVKKGDLLFTIDPRTFQAERARAKADVANAQARLALSDR 127

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
           E +  + L     + E+  ++R       +    +  + V    ++  +  ++  +T   
Sbjct: 128 ELARAERLVATKAISEETADNRRSARAQAVADLEAARAGVAIAELNVQFTEIRSPVTGRI 187

Query: 173 S 173
           S
Sbjct: 188 S 188


>gi|148684606|gb|EDL16553.1| nuclear mitotic apparatus protein 1, isoform CRA_b [Mus musculus]
          Length = 2088

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/205 (9%), Positives = 66/205 (32%), Gaps = 2/205 (0%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           ++ +    ++  +         +  E+S  +    +   L    +S    L     +   
Sbjct: 426 DNTQLQTRVETLECERGKQEAQLLAERSRFEDEKQQLASLIADLQSSVSNLSQAKEEL-E 484

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL-LSSHQKDLTMMKNLF 206
             S+     +++   S+      ++        L+ ++   +A  L + Q+   + + L 
Sbjct: 485 QASQAQGAQLTAQLTSMTGLNATLQQRDQELASLKEQAKKEQAQMLQTMQEQEQVAQGLR 544

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           ++     + L  +E+ + ++  E      +    L  + E  + +  E     +++    
Sbjct: 545 QQVEQLSSSLKLKEQQLEEAAKEQEATRQDHAQQLAIVAEAREASLRERDTARQQLETVE 604

Query: 267 EQNQRTFADEMSKLTILEKTREQKT 291
           ++          +L      R+   
Sbjct: 605 KEKDAKLESLQQQLQAANDARDNAQ 629



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 3/191 (1%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV---FNYGI 157
           + +  L+       +    L  + + LE     +E QLL    ++     ++        
Sbjct: 411 LQLDTLKQEAAKLATDNTQLQTRVETLECERGKQEAQLLAERSRFEDEKQQLASLIADLQ 470

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           SSV    + K    ++       L  + + +  L ++ Q+    + +L E+    Q  + 
Sbjct: 471 SSVSNLSQAKEELEQASQAQGAQLTAQLTSMTGLNATLQQRDQELASLKEQAKKEQAQML 530

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q  +   +    LR+ + +  + L+   +  +EA  E     ++ ++ L          +
Sbjct: 531 QTMQEQEQVAQGLRQQVEQLSSSLKLKEQQLEEAAKEQEATRQDHAQQLAIVAEAREASL 590

Query: 278 SKLTILEKTRE 288
            +     +  E
Sbjct: 591 RERDTARQQLE 601



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 73/209 (34%), Gaps = 17/209 (8%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              L  + +    +LR   DT +  L+ +  + D   ++ + + +   D      ++ ++
Sbjct: 576 AQQLAIVAEAREASLRER-DTARQQLETVEKEKDAKLESLQQQLQAANDARDNAQTSVTQ 634

Query: 152 VFN------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                      I  ++  ++      R +     +LE +       L + Q+  T  + +
Sbjct: 635 AQQEKAELSQKIGELHACIEASHQEQRQVQARVTELEAQ-------LKAEQQKTTEREKV 687

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEI 262
            ++ A  Q  L   E  +  +   L E      + L+       E   E        +  
Sbjct: 688 VQEKAQLQEQLRALEESLKITKGSLEEEKRRAADALKEQQCRATEMEAESRSLMEQRERE 747

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++LEQ +       +++  LE+  + +T
Sbjct: 748 QKELEQEKAGRKGLEARIQQLEEAHQAET 776



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 66/189 (34%), Gaps = 7/189 (3%)

Query: 107  RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
            R  ++ E   LD    KY     A  +  E  L  + +   + S+      +    +   
Sbjct: 1458 RQFLEVE---LDQAREKYVQELAAVRTDAETHLAEMRQEAQSTSRELEVMTAKYEGAKVK 1514

Query: 167  KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
             L   +     R  L  +        S  Q+    +K    +   SQ ++ + +  + + 
Sbjct: 1515 VLEERQRFQEERQKLTAQKLTEHDQASKVQQQK--LKAFQAQRGESQQEVQRLQTQLNEL 1572

Query: 227  TLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
              +L +     ++    + +     +A  +    L+E  +DLE+ Q+   +  S+   L 
Sbjct: 1573 QAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQKLQEQLQDLEELQKENKELRSEAERLG 1632

Query: 285  KTREQKTIL 293
            +  +Q  + 
Sbjct: 1633 RELQQAGLK 1641



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 83/234 (35%), Gaps = 18/234 (7%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC--HIDTEKSALDFLNNKYDVLE-- 128
              G    Q + L          +  +++  ++  +    +   +  +   N +   L+  
Sbjct: 850  SEGQPGQQQSQLAQLHASLAKAIQQVQEKEVRAQKLVDDLSALQEKMAATNKEVACLKTL 909

Query: 129  --KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
              KA E +E   L+ L +     ++  +       R        ++++      +  +  
Sbjct: 910  VLKAGEQQETASLELLKEPPRAANRASDRLGEQQGRPFSSTHAAVKAMEREAEQMGGELE 969

Query: 187  LLRALL--------SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             LRA L            +    +  L ++   +Q DL Q++    +  + L+  ++EQ+
Sbjct: 970  RLRAALIKSQGQQQEERGQQEREVARLTQERGQAQADLAQEKAAKAELEMRLQNTLNEQR 1029

Query: 239  NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                 + E    A  E     +E    L + +   A + ++L  L++T EQ  I
Sbjct: 1030 VEFAALQEALAHALTEKEGTDQE----LAKLRGQEAAQRTELKELQQTLEQLKI 1079



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 58/215 (26%), Gaps = 10/215 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            E    +  ++         +  +    + L    + L+    S EE+            
Sbjct: 668 TELEAQLKAEQQKTTEREKVVQEKAQLQEQLRALEESLKITKGSLEEEKRRAADALKEQQ 727

Query: 150 SKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLF 206
            +         S+    + +   +      R  LE +   L     +  + L   +    
Sbjct: 728 CRATEMEAESRSLMEQREREQKELEQEKAGRKGLEARIQQLEEAHQAETEALRHELAEAT 787

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY-----DEANLEFANYLKE 261
                ++++  +  R V            E+        E       ++   E      E
Sbjct: 788 ASQHRAESECERLIREVESRQKRFEARQQEEARYGAMFQEQLMALKGEKTGQEVQEEAVE 847

Query: 262 ISRDLE--QNQRTFADEMSKLTILEKTREQKTILS 294
           I  + +  Q Q   A   + L    +  ++K + +
Sbjct: 848 IHSEGQPGQQQSQLAQLHASLAKAIQQVQEKEVRA 882



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 70/214 (32%), Gaps = 7/214 (3%)

Query: 67   IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
            +K+  V    +  +    L    +ET             LR  + + +  ++      + 
Sbjct: 1247 LKRLVVAESEKSQKLEERLRLLQVETASNSARAAERSSALREEVQSLREEVEKQRVVSEN 1306

Query: 127  LEKAFESREEQLLDFLGKYHSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   S+ E+  +   +  +   K F     +S++          +  +   +   +  
Sbjct: 1307 SRQELASQAERAEELGQELKAWQEKFFQKEQALSALQLEHTSTQALVSELLPAKHLCQQL 1366

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             +   A     +++L   K         Q +L + +R +      LR+ I EQ+   + +
Sbjct: 1367 QAEQAAAEKRFREELEQSKQ-AAGGL--QAELMRAQREL-GELGSLRQKIVEQERAAQQL 1422

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                  +  E  + LK+    L +  R   +  +
Sbjct: 1423 RAEKA-SYAEQLSMLKKAHGLLAEENRGLGERAN 1455


>gi|167621649|ref|YP_001672157.1| RND family efflux transporter MFP subunit [Caulobacter sp. K31]
 gi|167351772|gb|ABZ74498.1| efflux transporter, RND family, MFP subunit [Caulobacter sp. K31]
          Length = 364

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 67/220 (30%), Gaps = 19/220 (8%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI--NELYDEANLEFANYLK 260
           +++     +++ D  + E  + ++   L     +  +    +   E   +      +  +
Sbjct: 86  QSVRRGQVLARIDAREIEEAIRQARAGLSAAQADLAHAEDDVIAQEPLAQTGAISRDVFR 145

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
             S   +  + T A   + L   +  R   TI SPI G IV  +   +   A   + L+ 
Sbjct: 146 GASLRRDVARSTVARAQAALGAAQAQRPYVTIASPIDGVIVA-RPGQAGELATPGRTLVT 204

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
            V   +    +  V    ++H+       VR    +D        ++  I P        
Sbjct: 205 -VEARRRLLFKMFVPETDVRHIAVDAPIEVRLDRLSDRT---LSGVVRGIVPSGDTTTRR 260

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                 YEV + +        +  L  G            
Sbjct: 261 ------YEVDIALPP------DPGLMPGMFGRARLVTGRR 288



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 54/180 (30%), Gaps = 5/180 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +   V+  G +   D+ V+I S  +G +    V  G  + +G  L   +  E  + I 
Sbjct: 49  ADLPDFVAIPGAVT-SDDRVDISSRVTGYVLLIAVHEGQSVRRGQVLARIDAREIEEAIR 107

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  +   +  +   +  +            + +      L       +        G 
Sbjct: 108 QARAGLSAAQADLAHAEDDVIAQEPLAQTGAISRDVFRGASLRRDVARSTVARAQAALGA 167

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +   R      + +  + + R     + +     L + +      + L  K  V + D+ 
Sbjct: 168 AQAQRPYVTIASPIDGVIVARPGQAGELATPGRTLVTVE----ARRRLLFKMFVPETDVR 223


>gi|77163690|ref|YP_342215.1| secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
 gi|254435756|ref|ZP_05049263.1| auxiliary transport protein, MFP family, putative [Nitrosococcus
           oceani AFC27]
 gi|76882004|gb|ABA56685.1| Secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
 gi|207088867|gb|EDZ66139.1| auxiliary transport protein, MFP family, putative [Nitrosococcus
           oceani AFC27]
          Length = 382

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 86/284 (30%), Gaps = 19/284 (6%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           ++ D L +              ++    +++L   R +      +  + + L A+L    
Sbjct: 41  EVSDILAQQLKVRPVGHGRVRDTLRLPGRVQLDEQR-LARIGASVTGRITALYAILGQEV 99

Query: 197 KDLTMMKNL--FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           +   ++  L   E  A     L    ++  +     R       +++        E  L 
Sbjct: 100 QRGDILAELNSTELGAAQAAYLKASSQVSLRKLAVSRAQRLLAGDVIGSAELQEREGELV 159

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
            A    +   D  +        + +LT   +      I + ++GT++  +  S     Q 
Sbjct: 160 AAEVEMQAGADQLRVLGMSDRSIKQLTRNGQIDSHSHITATLSGTVID-RRISLGQVVQP 218

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
           S  L  I   S +  + A++   Q   V++G  A    P             +  +  ++
Sbjct: 219 SDTLYTIADLSHVWLV-AQIPENQAYLVQEGQEAEAEIPALP---GPSATGQLIYVADVV 274

Query: 375 SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 +              +   +   ++R    A ++   +
Sbjct: 275 DPNTRTVTM-----------RMDVPNPQGQIRPNMLASIVIHTR 307


>gi|30248391|ref|NP_840461.1| putative cation efflux protein [Nitrosomonas europaea ATCC 19718]
 gi|30138277|emb|CAD84285.1| putative cation efflux protein [Nitrosomonas europaea ATCC 19718]
          Length = 387

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/305 (17%), Positives = 96/305 (31%), Gaps = 48/305 (15%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +  K+   F  +  + L    + +  +L         T   V  Y       S   KL R
Sbjct: 53  ERIKTGKPFYADIAEKLSVPGQIKVNELKLVQVGASFTGRIVEIYAHLGDSVSAGTKLAR 112

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
           + S  L +  L    +   A+L+  Q+     + LFE++ +S  +L ++E  +  S  EL
Sbjct: 113 ISSPELTQAQLAYLRANSLAVLA--QRAAMRAQQLFEEDVISAAELQRRESELQVSNAEL 170

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                                        K+  R L  + +   D   +  IL       
Sbjct: 171 SAA--------------------------KDHLRLLGMDNQAVQDLTKRGQILPSV---- 200

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            I +P +GT++  +  +     Q S  L  +     + ++   V       V+ G    V
Sbjct: 201 VITAPRSGTVIA-RDVALGQVVQPSDQLFTLA-DLSVLWVVGDVPEHAAHFVELGQHVEV 258

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
           R P   D     F   I  +  I++     +       V  ++ +         LR    
Sbjct: 259 RVPALGDT---SFDGTIIFVSDIVNPLTRTVT------VRTEVDNPER-----RLRPDML 304

Query: 411 AEVLF 415
             V  
Sbjct: 305 TTVNI 309



 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 45/146 (30%), Gaps = 15/146 (10%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIK--SPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
               I   +S  G+I   + +  ++  + F+G I +     G  +  GT L         
Sbjct: 61  FYADIAEKLSVPGQIKV-NELKLVQVGASFTGRIVEIYAHLGDSVSAGTKLARI------ 113

Query: 94  DLIDLKKVSIKNLRCH----IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              +L +  +  LR +    +    +       + DV+  A   R E  L       S  
Sbjct: 114 SSPELTQAQLAYLRANSLAVLAQRAAMRAQQLFEEDVISAAELQRRESELQVSNAELSAA 173

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIY 175
                  +  +       LT+   I 
Sbjct: 174 KDHL--RLLGMDNQAVQDLTKRGQIL 197


>gi|332661843|ref|YP_004451313.1| RND family efflux transporter MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332337340|gb|AEE54440.1| efflux transporter, RND family, MFP subunit [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 569

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 46/135 (34%), Gaps = 9/135 (6%)

Query: 42  ISVSSSGEILNEDN-VVEIKSPFSGIIKKFQVENGSQILQGTPLLTF-------EDIETT 93
            + +  G I+     +  + +P +G I K  V+ G ++  G  L          + +   
Sbjct: 253 SAATVFGTIIPASEGLGVVVAPQAGRITKVNVKVGQKVNAGQVLAIMRQNIGTPDQVGIV 312

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE-KAFESREEQLLDFLGKYHSTCSKV 152
                  V I+  +  +   K   + L    D+   +  ++ E      L +  +   + 
Sbjct: 313 ANNAGLAVQIETAKTRLAAAKREYERLKKIEDIAAGRDIQAAEATYNAALAELQTLERQA 372

Query: 153 FNYGISSVYRSLKMK 167
                S+  R++ + 
Sbjct: 373 VGANTSANSRTITLL 387



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 45/117 (38%), Gaps = 11/117 (9%)

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR-------- 287
           + +     +     E             RD++  + T+   +++L  LE+          
Sbjct: 321 QIETAKTRLAAAKREYERLKKIEDIAAGRDIQAAEATYNAALAELQTLERQAVGANTSAN 380

Query: 288 -EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               T+L+PI+G +V   + +  +     Q L+ +   +   Y+ A+V  + I  ++
Sbjct: 381 SRTITLLAPISG-VVGAFTLTPGSEVVAGQALLTVTNLN-KVYVEAQVFDRDIPLIQ 435


>gi|330955162|gb|EGH55422.1| secretion protein HlyD [Pseudomonas syringae Cit 7]
          Length = 391

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 70/203 (34%), Gaps = 22/203 (10%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  IE +VS+ G +L   N V + +  SG ++  +V+ G ++ +   L   + +   +
Sbjct: 50  AEVTDIEYAVSAQG-VLQGRNQVAVGAQVSGQLQSLKVKPGDKVKRNQLLAEIDPLPAKN 108

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNN-----------------KYDVLEKAFESREEQ 137
            +    V ++ L    D     L    +                   D      E++   
Sbjct: 109 ALRQAVVKVEQLNAERDATLHKLKLAESNDRRYQELGSTEAVSKADQDKARFELETQRAN 168

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L+    + H+   K     I   Y  +   +       + +       +++   ++    
Sbjct: 169 LVSLTAQLHTAHVKEEAARIKLDYTRIFAPMDGQVLAIVTQEG----QTVIADQMAPVIL 224

Query: 198 DLTMMKNLFEKNAVSQNDLNQQE 220
            +  +  +  K  +S+ D+ + +
Sbjct: 225 KMAQLDTMIVKAQISEADVLKIQ 247



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 82/293 (27%), Gaps = 17/293 (5%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           EE+ +        T  +        +    ++ +    S  L  L ++    + R  L +
Sbjct: 40  EEETVFLSAAAEVTDIEYAVSAQGVLQGRNQVAVGAQVSGQLQSLKVKPGDKVKRNQLLA 99

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
               L     L  + AV + +    ER      L+L E+   +   L     +      +
Sbjct: 100 EIDPLPAKNAL--RQAVVKVEQLNAERDATLHKLKLAESNDRRYQELGSTEAVSKADQDK 157

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
               L+    +L            K        +   I +P+ G ++             
Sbjct: 158 ARFELETQRANLVSLTAQLHTAHVKEEAARIKLDYTRIFAPMDGQVLAI-VTQEGQTVIA 216

Query: 315 SQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF-----KAII 367
            Q  P++  +       ++A+++   +  ++ G       P   D              +
Sbjct: 217 DQMAPVILKMAQLDTMIVKAQISEADVLKIQSGLPVYFTIPGDPDRHHDATLKAIEPGPV 276

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +   P  S          +Y  +  + +L    N   +     A V    +  
Sbjct: 277 DAASP--SGTTGENSKAVFYNALFDVPNLE---NRFYIN--MTANVRIVLEAK 322


>gi|295401207|ref|ZP_06811180.1| efflux transporter, RND family, MFP subunit [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976800|gb|EFG52405.1| efflux transporter, RND family, MFP subunit [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 395

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 70/229 (30%), Gaps = 2/229 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I+ +V + G     +       P  G+I +  V  G ++  GTPL+ + D +    I   
Sbjct: 47  IKETVRTGGFTAPAERKFVYYDPQLGVIDEILVAKGQEVQAGTPLIRYADADIDREIQRI 106

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR-EEQLLDFLGKYHSTCSKVFNYGIS 158
            +  + L   I+     +D         E+    + + +      +   T  +       
Sbjct: 107 ALKKEQLHAQIEQLAKDIDHYTTLSSSAEEEDSMKIQWEEKAREAEREKTLLEWKIKEYE 166

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
                L  K   +         +E  S      L +      +++   ++  + +  + Q
Sbjct: 167 EQQNELTEKKDELVVESKMAGIIEEISYDKSKPLITIASPSAIVRGKAKEGTIEKLAIGQ 226

Query: 219 QERI-VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              + V          I +   +        +++   F   L E  + L
Sbjct: 227 AAVVRVPNEKESFAGTIADIGKIPVKEASFQEKSEYPFTVQLNEQPKQL 275


>gi|295676211|ref|YP_003604735.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
           CCGE1002]
 gi|295436054|gb|ADG15224.1| efflux transporter, RND family, MFP subunit [Burkholderia sp.
           CCGE1002]
          Length = 459

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/326 (13%), Positives = 105/326 (32%), Gaps = 34/326 (10%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + +++ G +     V  +    SG+++    + G  + +G  L   +      
Sbjct: 100 ATQGEMPVVLTALGTVTPLATV-TVLPQLSGVLQDVYFKEGQMVKKGDVLAQIDPRPYEI 158

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +   + ++   +  + T +  LD    +  + + +  S++      L + +    K   
Sbjct: 159 SLRNAEGTLVRDQALLATAR--LDLKRYQTLLAQDSIASQQVDTQASLVRQYEGTVKADQ 216

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             + S    L +   R+ +    R+ L                    + +      V   
Sbjct: 217 ANVDSFK--LDLVYARITAPVSGRVGLRQ------------VDPGNYVTSGLANGIVVIT 262

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN--------LEFANYLKEISRDL 266
            L+    +   S   L++ I   +N        YD +N        L+  +   + +   
Sbjct: 263 QLDPISVLFTTSEDNLQQIIQHTRNGESLSATAYDRSNTHPLEVGSLKTMDNQIDTTTGT 322

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIV-PH 324
            + +  F ++ + L   +    +  +      TI       +S     SQ   + IV P 
Sbjct: 323 IKLRAIFENKDNGLFPNQFVNTRLLV-----DTIKDAVIVPTSAVLNGSQGTFVYIVKPD 377

Query: 325 SKLTYIRAKVTPKQ--IQHVKKGYTA 348
           + +T  + KV P       ++ G   
Sbjct: 378 NTVTVRQVKVGPVDGERTSIQSGLAV 403


>gi|206889679|ref|YP_002249362.1| acriflavine resistance protein A [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206890392|ref|YP_002249412.1| acriflavine resistance protein A [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741617|gb|ACI20674.1| acriflavine resistance protein A [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206742330|gb|ACI21387.1| acriflavine resistance protein A [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 381

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 68/178 (38%), Gaps = 6/178 (3%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           EI+   SGII K     GS +  G  L   +  +     D  K ++     ++ + K+  
Sbjct: 60  EIRPQVSGIILKRYFTEGSNVKAGEVLYQIDPAQYKAAYDNAKAALSRAEANLQSVKAKY 119

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +    +Y  L K     +++  D   +Y  T S++           + +  T++ +    
Sbjct: 120 E----RYQELIKVNAISKQEFDDVKAQYEQTLSEIEALKAQVRNAQINLGYTKITAPISG 175

Query: 178 RLDLEN--KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           R+   N  + +L+ A  +     +  +  ++     S  +L + E+ + +  L+    
Sbjct: 176 RIGKSNVTEGALVTAYQAQELTRIQQLDPIYVDIPQSTKELRELEKRLEQGRLKYAGK 233



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/104 (10%), Positives = 30/104 (28%), Gaps = 3/104 (2%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--EISRDLEQNQ 270
           Q D  Q +     +   L       +++        +   +   +  +  ++    EQ  
Sbjct: 88  QIDPAQYKAAYDNAKAALSRAEANLQSVKAKYERYQELIKVNAISKQEFDDVKAQYEQTL 147

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                  +++   +       I +PI+G I    + +       
Sbjct: 148 SEIEALKAQVRNAQINLGYTKITAPISGRI-GKSNVTEGALVTA 190


>gi|170741981|ref|YP_001770636.1| RND family efflux transporter MFP subunit [Methylobacterium sp.
           4-46]
 gi|168196255|gb|ACA18202.1| efflux transporter, RND family, MFP subunit [Methylobacterium sp.
           4-46]
          Length = 385

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/205 (11%), Positives = 61/205 (29%), Gaps = 8/205 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I      +G ++  D ++         I +  VE G ++ +G  L           +  
Sbjct: 31  EIVERTVVTGTLVPRDEIMVSPEIEGCRITELLVEEGDRVARGAVLARLSREMIDTQLAQ 90

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES-----REEQLLDFLGKYHSTCSKVF 153
              +I      ++  +S +            A E      R     +   +  ++ ++  
Sbjct: 91  NAAAIARAEAAVEQARSTIVQAEAAQVEAALALERTRTLIRTGNATEVQMEQRTSAARSA 150

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +++    L +    +      R +L+ K +          +   + +      A + 
Sbjct: 151 EGRLAAARNGLSIAEADLLQARAQRKELDLKLARTEI---RAPEGGIVSRRTARIGATAS 207

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
                  R++ +  +EL   + E  
Sbjct: 208 ATAEPLFRLIARGEIELEGEVTETG 232



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 56/189 (29%), Gaps = 11/189 (5%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           + A S     +  ++     LE    +    N      E    A       L      L 
Sbjct: 103 EQARSTIVQAEAAQVEAALALERTRTLIRTGNATEVQMEQRTSAARSAEGRLAAARNGLS 162

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-SQPLMKIVPHSK 326
             +       ++   L+    +  I +P  G IV  ++      A   ++PL +++    
Sbjct: 163 IAEADLLQARAQRKELDLKLARTEIRAP-EGGIVSRRTARIGATASATAEPLFRLI-ARG 220

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              +  +VT   +  +K G  A +                +  + P I +          
Sbjct: 221 EIELEGEVTETGMPRLKPGAPAQLDLDTPDGSV--GVPGRVRAVYPEIDRATRLG----- 273

Query: 387 YEVILKITD 395
            +V +++  
Sbjct: 274 -KVRVRLDP 281


>gi|220923916|ref|YP_002499218.1| RND family efflux transporter MFP subunit [Methylobacterium
           nodulans ORS 2060]
 gi|219948523|gb|ACL58915.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           nodulans ORS 2060]
          Length = 396

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 62/205 (30%), Gaps = 8/205 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I      +G ++  D ++         I +  VE G ++ +G  L           +  
Sbjct: 42  EIVERTVVTGTLVPRDEIMVSPEIEGCRITELLVEEGDRVARGAVLARLSREMLDTQLAQ 101

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE-----QLLDFLGKYHSTCSKVF 153
              +I      +D  +S +            A E            + L +   + ++  
Sbjct: 102 NAAAIARAEAAVDQARSTIVQAEAAQVEAALALERTRTLMKSGNATEALLEQRVSAARSA 161

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +  +++    L +    +      R +L+ K +          +   + + +    A + 
Sbjct: 162 DGRLAAARNGLSIAEAELLQAKAQRKELDLKLARTEI---RAPEGGIVSRRVARVGATAS 218

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
                  R++ +  +EL   + E  
Sbjct: 219 ASGEPLFRLIARGEIELEGEVTETG 243


>gi|154336096|ref|XP_001564284.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 2630

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 67/210 (31%), Gaps = 5/210 (2%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            I      + +++  ++ R  ++ E+ A   +    D  E+  ++R   L DF  +     
Sbjct: 980  IRAQAQQERQEIHAESQRLLLEAEQRAERRIREARDAAEQLLQAR---LDDFRDEAARRA 1036

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                     +      +   ++++      + + ++            ++          
Sbjct: 1037 EHAAVMQALAEEEKRAVLEAKLQAAQRQLDEAQQRAQEEVRRAREDAAEMAAADAARAAR 1096

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
               + +   QER   +  L L E   E++  +R + E+   A        +E +R   + 
Sbjct: 1097 EAQRREEEWQERSRAEHLLRLAEQASEREEAIRRLAEIETRAAEAVQLAREEAARTAAEA 1156

Query: 270  QRTFAD--EMSKLTILEKTREQKTILSPIA 297
            Q   AD     +    E     + + S   
Sbjct: 1157 QERLADMVRRQQAREAEVQLAAQRVRSARD 1186


>gi|154335017|ref|XP_001563755.1| kinesin [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134060777|emb|CAM37792.1| putative kinesin [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 1037

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 70/226 (30%), Gaps = 26/226 (11%)

Query: 91  ETTDLIDLKKVSIKNLR----CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
              D+    +  ++ LR      +      +  L      L++   ++E +  D L +  
Sbjct: 619 RFEDMKRGYEARLRALRDESDAALGASADEIAALRRLVAELQERLAAKETECADVLDRLA 678

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           +  +K ++   S+  R+      ++RS+    L+ E  S  LR  +      L  ++   
Sbjct: 679 ALQAK-YDADTSAGERARGELEDQLRSMRALLLEQEGASLELRKQIEERDAQLATVETHL 737

Query: 207 EKNAVSQNDLNQQ-----------ERIVYKSTLELRENIHEQKNMLRHINELYDE----- 250
           E+       L +Q           +  + +    L+  + E +  +    E   E     
Sbjct: 738 EETHTQATTLTEQLTAATRAAAERKEELERELQALQSVVEELRTDMATTEEALQENTAKL 797

Query: 251 -----ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                   E +  L +    L++     AD    L           
Sbjct: 798 AVTEETLQETSGKLADTEEALQETSAKLADTEETLQETSAKLAVTE 843



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 66/218 (30%), Gaps = 12/218 (5%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKN--LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
             L     ++     D          L   + + ++ L         L K  E R+ QL 
Sbjct: 672 DVLDRLAALQAKYDADTSAGERARGELEDQLRSMRALLLEQEGASLELRKQIEERDAQLA 731

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                   T ++        +  + +    R   +      L++    LR  +++ ++  
Sbjct: 732 TVETHLEETHTQATTLT-EQLTAATRAAAERKEELERELQALQSVVEELRTDMATTEE-- 788

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL------YDEANL 253
             ++    K AV++  L +    +  +   L+E   +  +    + E        +EA  
Sbjct: 789 -ALQENTAKLAVTEETLQETSGKLADTEEALQETSAKLADTEETLQETSAKLAVTEEALQ 847

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E +  L +    L++     AD    L           
Sbjct: 848 ETSAKLADTEDTLQETSAKLADTEEALQETSAKLADTE 885


>gi|114657477|ref|XP_001173552.1| PREDICTED: similar to tropomyosin isoform 2 [Pan troglodytes]
          Length = 311

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 67/220 (30%), Gaps = 3/220 (1%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +   +L  +     D  +  +   K         +  L  L  K    E   +   
Sbjct: 2   DAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYS 61

Query: 136 EQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           E L D   K      K       ++S+ R +++    +            K         
Sbjct: 62  EALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAAD 121

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             ++ + ++++  +K+   + ++ + +    K   E  +  +E+      I E   E   
Sbjct: 122 ESERGMKVIESRAQKD-EEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAE 180

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           E A   +   R LE+  R     +  L   E    QK   
Sbjct: 181 ERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDR 220


>gi|29436756|gb|AAH49791.1| Nuclear mitotic apparatus protein 1 [Mus musculus]
          Length = 2094

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/205 (9%), Positives = 66/205 (32%), Gaps = 2/205 (0%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           ++ +    ++  +         +  E+S  +    +   L    +S    L     +   
Sbjct: 426 DNTQLQTRVETLECERGKQEAQLLAERSRFEDEKQQLASLIADLQSSVSNLSQAKEEL-E 484

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL-LSSHQKDLTMMKNLF 206
             S+     +++   S+      ++        L+ ++   +A  L + Q+   + + L 
Sbjct: 485 QASQAQGAQLTAQLTSMTGLNATLQQRDQELASLKEQAKKEQAQMLQTMQEQEQVAQGLR 544

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           ++     + L  +E+ + ++  E      +    L  + E  + +  E     +++    
Sbjct: 545 QQVEQLSSSLKLKEQQLEEAAKEQEATRQDHAQQLAIVAEAREASLRERDTARQQLETVE 604

Query: 267 EQNQRTFADEMSKLTILEKTREQKT 291
           ++          +L      R+   
Sbjct: 605 KEKDAKLESLQQQLQAANDARDNAQ 629



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 3/191 (1%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV---FNYGI 157
           + +  L+       +    L  + + LE     +E QLL    ++     ++        
Sbjct: 411 LQLDTLKQEAAKLATDNTQLQTRVETLECERGKQEAQLLAERSRFEDEKQQLASLIADLQ 470

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           SSV    + K    ++       L  + + +  L ++ Q+    + +L E+    Q  + 
Sbjct: 471 SSVSNLSQAKEELEQASQAQGAQLTAQLTSMTGLNATLQQRDQELASLKEQAKKEQAQML 530

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q  +   +    LR+ + +  + L+   +  +EA  E     ++ ++ L          +
Sbjct: 531 QTMQEQEQVAQGLRQQVEQLSSSLKLKEQQLEEAAKEQEATRQDHAQQLAIVAEAREASL 590

Query: 278 SKLTILEKTRE 288
            +     +  E
Sbjct: 591 RERDTARQQLE 601



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 73/209 (34%), Gaps = 17/209 (8%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              L  + +    +LR   DT +  L+ +  + D   ++ + + +   D      ++ ++
Sbjct: 576 AQQLAIVAEAREASLRER-DTARQQLETVEKEKDAKLESLQQQLQAANDARDNAQTSVTQ 634

Query: 152 VFN------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                      I  ++  ++      R +     +LE +       L + Q+  T  + +
Sbjct: 635 AQQEKAELSQKIGELHACIEASHQEQRQVQARVTELEAQ-------LKAEQQKTTEREKV 687

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEI 262
            ++ A  Q  L   E  +  +   L E      + L+       E   E        +  
Sbjct: 688 VQEKAQLQEQLRALEESLKITKGSLEEEKRRAADALKEQQCRATEMEAESRSLMEQRERE 747

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++LEQ +       +++  LE+  + +T
Sbjct: 748 QKELEQEKAGRKGLEARIQQLEEAHQAET 776



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 83/234 (35%), Gaps = 18/234 (7%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC--HIDTEKSALDFLNNKYDVLE-- 128
              G    Q + L          +  +++  ++  +    +   +  +   N +   L+  
Sbjct: 850  SEGQPGQQQSQLAQLHASLAKAIQQVQEKEVRAQKLVDDLSALQEKMAATNKEVACLKTL 909

Query: 129  --KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
              KA E +E   L+ L +     ++  +       R        ++++      +  +  
Sbjct: 910  VLKAGEQQETASLELLKEPPRAANRASDQLGEQQGRPFSSTHAAVKAMEREAEQMGGELE 969

Query: 187  LLRALL--------SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             LRA L            +    +  L ++   +Q DL Q++    +  + L+  ++EQ+
Sbjct: 970  RLRAALIKSQGQQQEERGQQEREVARLTQERGQAQADLAQEKAAKAELEMRLQNTLNEQR 1029

Query: 239  NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                 + E    A  E     +E    L + +   A + ++L  L++T EQ  I
Sbjct: 1030 VEFAALQEALAHALTEKEGTDQE----LAKLRGQEAAQRTELKELQQTLEQLKI 1079



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 58/215 (26%), Gaps = 10/215 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            E    +  ++         +  +    + L    + L+    S EE+            
Sbjct: 668 TELEAQLKAEQQKTTEREKVVQEKAQLQEQLRALEESLKITKGSLEEEKRRAADALKEQQ 727

Query: 150 SKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLF 206
            +         S+    + +   +      R  LE +   L     +  + L   +    
Sbjct: 728 CRATEMEAESRSLMEQREREQKELEQEKAGRKGLEARIQQLEEAHQAETEALRHELAEAT 787

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY-----DEANLEFANYLKE 261
                ++++  +  R V            E+        E       ++   E      E
Sbjct: 788 ASQHRAESECERLIREVESRQKRFEARQQEEARYGAMFQEQLMALKGEKTGQEVQEEAVE 847

Query: 262 ISRDLE--QNQRTFADEMSKLTILEKTREQKTILS 294
           I  + +  Q Q   A   + L    +  ++K + +
Sbjct: 848 IHSEGQPGQQQSQLAQLHASLAKAIQQVQEKEVRA 882



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 70/214 (32%), Gaps = 7/214 (3%)

Query: 67   IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
            +K+  V    +  +    L    +ET             LR  + + +  ++      + 
Sbjct: 1247 LKRLVVAESEKSQKLEERLRLLQVETASNSARAAERSSALREEVQSLREEVEKQRVVSEN 1306

Query: 127  LEKAFESREEQLLDFLGKYHSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   S+ E+  +   +  +   K F     +S++          +  +   +   +  
Sbjct: 1307 SRQELASQAERAEELGQELKAWQEKFFQKEQALSALQLEHTSTQALVSELLPAKHLCQQL 1366

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             +   A     +++L   K         Q +L + +R +      LR+ I EQ+   + +
Sbjct: 1367 QAEQAAAEKRFREELEQSKQ-AAGGL--QAELMRAQREL-GELGSLRQKIVEQERAAQQL 1422

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                  +  E  + LK+    L +  R   +  +
Sbjct: 1423 RAEKA-SYAEQLSMLKKAHGLLAEENRGLGERAN 1455



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 9/174 (5%)

Query: 116  ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
             LD    KY     A  +  E  L  + +   + S+      +    +    L   +   
Sbjct: 1464 ELDQAREKYVQELAAVRTDAETHLAEMRQEAQSTSRELEVMTAKYEGAKVKVLEERQRFQ 1523

Query: 176  LNRLDLENKSSLLRALLSSHQK----DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
              R  L  +   L   L+ H +        +K    +   SQ ++ + +  + +   +L 
Sbjct: 1524 EERQKLTAQVEELSKKLTEHDQASKVQQQKLKAFQAQRGESQQEVQRLQTQLNELQAQLS 1583

Query: 232  ENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRT---FADEMSKL 280
            +     ++    + +     +A  +    L+E  +DLE+ Q+       E  +L
Sbjct: 1584 QKEQAAEHYKLQMEKAKTHYDAKKQQNQKLQEQLQDLEELQKENKELRSEAERL 1637


>gi|320101862|ref|YP_004177453.1| RND family efflux transporter MFP subunit [Isosphaera pallida ATCC
           43644]
 gi|319749144|gb|ADV60904.1| efflux transporter, RND family, MFP subunit [Isosphaera pallida
           ATCC 43644]
          Length = 491

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/337 (9%), Positives = 96/337 (28%), Gaps = 45/337 (13%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +++   + +L   I            +           E   LD   +Y           
Sbjct: 114 EIQASQLTSLHARIAGLVRVASHEAGESVRAGTVLAELEAPELDADLQYRRAEVDRARAR 173

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS---Q 213
                 +L +    +         +        A +   +     +  L +++ ++   +
Sbjct: 174 TRQAEAALAVAEAAIHRAQAELAQVRASIRRADAEVERGRTQFQRIDQLAKESVLTAGLR 233

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           ++   +  +   +  E+   +   +  L       D+A  + A    +I+  + + +   
Sbjct: 234 DESLNRYMLAQAARREIDARLSSAEAALAQARAERDKAQADLAAAQADIT--VAEAEIAR 291

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A  + +          + I++P  G ++  +                     +  +I A+
Sbjct: 292 AQVLER---------HRRIVAPHDGILLERRV-EPGQTTLPGDT-------GEPLFILAR 334

Query: 334 --------VTPKQIQHV-KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                   V P+ +  +   G  A +R P    + E+     + ++   +   +   +  
Sbjct: 335 NDRVRAVVVVPEDVAALMNVGQEAEIRPPT---VEERYVAGKVSRLSGPLDPINPTWRV- 390

Query: 385 EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                     ++  ++ +  L+ G    V       T
Sbjct: 391 ----------EIDLANPDHLLQPGQVVSVTVILDERT 417


>gi|311693000|gb|ADP95873.1| cation efflux family protein [marine bacterium HP15]
          Length = 394

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 54/141 (38%), Gaps = 2/141 (1%)

Query: 41  EISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  V++  E+    D V E+     G + +  V+ G Q+ +G  L     +E    I  +
Sbjct: 72  DNIVTAPAEVHYVPDRVAEVGPLLQGKLTRLAVDLGDQVEKGQLLAALNSVEL-ARIRSR 130

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             S+K  +     E      L ++    E+ F   +   L+   +Y S   ++  +G  S
Sbjct: 131 LNSLKARKEAATAEYQREKQLRSESFTSEEEFLDAKAAYLEITAEYDSIREQLAVFGSDS 190

Query: 160 VYRSLKMKLTRMRSIYLNRLD 180
                 +    +RS    R++
Sbjct: 191 SGADSSLAQYALRSPIQGRIE 211



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 96/316 (30%), Gaps = 31/316 (9%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            H   E         +     +  E+RE  L     +  S  +     G +    +   +
Sbjct: 21  AHGAEEAEGGQHQKGEAGHSAEGSEAREVHLTPEQRELLSVQTVTVPRGRADNIVTAPAE 80

Query: 168 LTRM-RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYK 225
           +  +   +      L+ K + L   L    +   ++  L        ++ LN  +     
Sbjct: 81  VHYVPDRVAEVGPLLQGKLTRLAVDLGDQVEKGQLLAALNSVELARIRSRLNSLKARKEA 140

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +T E +      +  LR  +   +E  L+      EI+ + +  +   A   S  +  + 
Sbjct: 141 ATAEYQR-----EKQLRSESFTSEEEFLDAKAAYLEITAEYDSIREQLAVFGSDSSGADS 195

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
           +  Q  + SPI G I    +         S      V  + + ++  +V    I  V  G
Sbjct: 196 SLAQYALRSPIQGRIERMDAR-LGQTLSSSDTPFT-VADTSVVWVMLQVAETDIGRVSVG 253

Query: 346 YTATVRFPHYADIREKKF-KAIIEKIDPIISQQDN-------------NLQTQEYYEVIL 391
               V    ++   E +F    +  I   + ++               +L+   Y    +
Sbjct: 254 DEVQV----FSKSVEDRFHTGEVSWISNELDEETRTIPVRVVLESPNGDLRPNTYATARI 309

Query: 392 KITDLAFSDNNIELRN 407
                A    ++ L  
Sbjct: 310 MTESAA----SLPLVP 321


>gi|307292615|ref|ZP_07572461.1| efflux transporter, RND family, MFP subunit [Sphingobium
           chlorophenolicum L-1]
 gi|306880681|gb|EFN11897.1| efflux transporter, RND family, MFP subunit [Sphingobium
           chlorophenolicum L-1]
          Length = 416

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 69/218 (31%), Gaps = 18/218 (8%)

Query: 12  NHPASLKRMTLLSIIGIIGLITWSILLPIEISVSS----SGEILNEDNVVEIKSPFSGII 67
           + P +    T L  +G+          P+  +V+      G        VEI+   SG +
Sbjct: 44  DRPEAQAAATPLVTVGVA--------APLSRAVTQWDDYVGRFAPS-QTVEIRPRVSGSV 94

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS---ALDFLNNKY 124
                 +G  +  G  L T +       +   + S  + R  +   ++    +  L    
Sbjct: 95  TAIHFRDGDYVKAGQLLFTIDQRPFLAALAEARASTASARSALLLAQNDYGRVQRLTGDE 154

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            V     +S   +L           ++     +   +  ++  ++    +   R+D+ N 
Sbjct: 155 AVSASEVDSLRSRLQAAQAALAGAQARERQRALDMEFTQVRAPISGR--VSDRRVDIGNL 212

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
            S      ++    +  +  ++     S+    + +R 
Sbjct: 213 VSAGEGAGATLLTTVNKLDPIYFNFDASEALYLKSQRD 250


>gi|149066032|gb|EDM15905.1| myosin, heavy polypeptide 9, non-muscle [Rattus norvegicus]
          Length = 1960

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 67/209 (32%), Gaps = 5/209 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +D   +   +      K     + + ++ +  L  +    E+A    +++  +   + 
Sbjct: 1653 ELDDTRASR--EEILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEI 1710

Query: 146  HSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             ++  K  +       +   +      +     N   + ++       +     DL + +
Sbjct: 1711 ANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLER 1770

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEI 262
            +  +KN  ++  L +Q + +     E+   +  + K  +  +     +   +  N  KE 
Sbjct: 1771 SHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAALEAKIAQLEEQLDNETKER 1830

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +Q +R        L  +E  R    
Sbjct: 1831 QAASKQVRRAEKKLKDVLLQVEDERRNAE 1859



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 68/199 (34%), Gaps = 5/199 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ ++  ++  N K    +K  E R  +    L +     SK
Sbjct: 958  ARQKLQLEKVTTEAKLKKLEEDQIIMEDQNCKLAKEKKLLEDRVAEFTTNLME-EEEKSK 1016

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +     +     R+R     R +LE     L    +     +     L  + A 
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIA---ELQAQIAE 1073

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +  L ++E  +  +   + E   ++   L+ I EL  +   E    L+       + ++
Sbjct: 1074 LKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELETQI-SELQEDLESERACRNKAEK 1132

Query: 272  TFADEMSKLTILEKTREQK 290
               D   +L  L+   E  
Sbjct: 1133 QKRDLGEELEALKTELEDT 1151



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 72/225 (32%), Gaps = 37/225 (16%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
               + LR  +  +K  L+ + +  +   +  E R + L     K      ++        
Sbjct: 897  AEAEELRARLTAKKQELEEICHDLEARVEEEEERCQYLQAEKKKMQQNIQELEEQLEEEE 956

Query: 161  YRSLKMKLT----------------------------------RMRSIYLNRLDLENKSS 186
                K++L                                   R+     N ++ E KS 
Sbjct: 957  SARQKLQLEKVTTEAKLKKLEEDQIIMEDQNCKLAKEKKLLEDRVAEFTTNLMEEEEKSK 1016

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L  L + H+  +T ++    +    + +L +  R +   + +L + I E +  +  +  
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKM 1076

Query: 247  LYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTRE 288
               +   E    L  +  +  Q     +   +  ++++ L++  E
Sbjct: 1077 QLAKKEEELQAALARVEEEAAQKNMALKKIRELETQISELQEDLE 1121



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 70/187 (37%), Gaps = 1/187 (0%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            S+  L       +  ++ +  + + LE   ++ E+  L       +  ++          
Sbjct: 1519 SVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDE 1578

Query: 162  RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +S + K   +R +     +LE++       +++ +K    +K+L      +  +  +  +
Sbjct: 1579 QSEEKKKQLVRQVREMEAELEDERKQRSIAMAARKKLEMDLKDLEAHIDTANKNREEAIK 1638

Query: 222  IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             + K   ++++ + E  +      E+  +A  E    LK +  ++ Q Q   A       
Sbjct: 1639 QLRKLQAQMKDCMRELDDTRASREEILAQAK-ENEKKLKSMEAEMIQLQEELAAAERAKR 1697

Query: 282  ILEKTRE 288
              ++ R+
Sbjct: 1698 QAQQERD 1704



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 80/237 (33%), Gaps = 16/237 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             +     +   L+        +L D +K     +      E   L  L    D   K  E
Sbjct: 1576 RDEQSEEKKKQLVRQVREMEAELEDERKQRSIAMAARKKLEMD-LKDLEAHIDTANKNRE 1634

Query: 133  SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               +QL     +      ++ +       +    K    +++S+    + L+ + +    
Sbjct: 1635 EAIKQLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMIQLQEELAAAER 1694

Query: 191  LLSSHQKDLTMMKNLFE----KNAVSQNDLNQQERIVYKSTLELRENIH-------EQKN 239
                 Q++   + +       K A++  +  + E  + +   EL E            K 
Sbjct: 1695 AKRQAQQERDELADEIANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKK 1754

Query: 240  MLRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                I+++  + NLE ++  K     + LE+  +    ++ ++    K++ + +I +
Sbjct: 1755 ANLQIDQINTDLNLERSHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAA 1811



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 74/210 (35%), Gaps = 12/210 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +  D  +   +       +   AL+    +   LE+  +    ++ D +         V
Sbjct: 1461 AEERDRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSV 1520

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                    ++ + ++   T++  +       E+    L   L + +      ++L  ++ 
Sbjct: 1521 HELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFE--RDLQGRDE 1578

Query: 211  VSQNDLNQQERIVYKSTLEL-----RENIHEQKNMLRHINELYDEANLEFANY-LKEISR 264
             S+    Q  R V +   EL     + +I         ++    EA+++ AN   +E  +
Sbjct: 1579 QSEEKKKQLVRQVREMEAELEDERKQRSIAMAARKKLEMDLKDLEAHIDTANKNREEAIK 1638

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILS 294
             L + Q    D M +L   +    ++ IL+
Sbjct: 1639 QLRKLQAQMKDCMRELD--DTRASREEILA 1666



 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 62/214 (28%), Gaps = 10/214 (4%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             D+E     + ++            +         + +   +     E+   +   K   
Sbjct: 918  HDLEARVEEEEERCQYLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLE 977

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                +       + +  K+   R+     N ++ E KS  L  L + H+  +T ++    
Sbjct: 978  EDQIIMEDQNCKLAKEKKLLEDRVAEFTTNLMEEEEKSKSLAKLKNKHEAMITDLEERLR 1037

Query: 208  KNAVSQNDLNQQER-------IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            +    + +L +  R        +     EL+  I E K  L    E    A         
Sbjct: 1038 REEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAA 1097

Query: 261  E---ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +     + + + +   ++    L      R +  
Sbjct: 1098 QKNMALKKIRELETQISELQEDLESERACRNKAE 1131



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 69/213 (32%), Gaps = 17/213 (7%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKY--------DVLEKAFESREEQLLDF-LGK 144
                 K       +  ++   + L+    +         D L+KA    ++   D  L +
Sbjct: 1711 ANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLER 1770

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSI-----YLNRLDLENKSSLLRALLSSHQKDL 199
             H+  ++     +    + LK KL  M S        +   LE K + L   L +  K+ 
Sbjct: 1771 SHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAALEAKIAQLEEQLDNETKER 1830

Query: 200  TMMKNLFEKNAVSQNDLN---QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                    +      D+    + ER   +   +  +    +   L+   E  +E      
Sbjct: 1831 QAASKQVRRAEKKLKDVLLQVEDERRNAEQFKDQADKASTRLKQLKRQLEEAEEEAQRAN 1890

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               +++ R+LE    T      +++ L+    +
Sbjct: 1891 ASRRKLQRELEDATETADAMNREVSSLKNKLRR 1923


>gi|88800059|ref|ZP_01115629.1| Secretion protein HlyD [Reinekea sp. MED297]
 gi|88777185|gb|EAR08390.1| Secretion protein HlyD [Reinekea sp. MED297]
          Length = 471

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 57/175 (32%), Gaps = 2/175 (1%)

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
           +P +  + +  V  G+++  G  L      +  + +  ++ ++  L   I  E  +L   
Sbjct: 136 APAAATVSELNVREGARVDGGQTLAVLTSEDLPEQLRQREAALNELDARIRNE--SLRHQ 193

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
            +   +  +    R  +         ++     N    +  R+ + +   +++  L    
Sbjct: 194 TDLEALEIEEELVRIAKNAVDRFSSLNSQQLTSNTDYEAALRTYQSQRLSLQNRQLTINQ 253

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
             +  + L+A        +   + L E   V         R+  K   E+  +  
Sbjct: 254 YADTQAQLQAQREQLLSQIRQTRQLIEDLTVQAPFTGLLARVHVKDGQEVSGSEA 308


>gi|126464455|ref|YP_001045568.1| secretion protein HlyD family protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126106266|gb|ABN78796.1| secretion protein HlyD family protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 348

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 88/269 (32%), Gaps = 8/269 (2%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           + R+        +L+ + G++ L+    L P   ++ ++       NV  +    SG + 
Sbjct: 1   MNRSLMLPTAIASLIGLAGVLLLLFAWHLPPFAPAMPTTENAYLRGNVTIVAPQLSGYLS 60

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             +V +   +  G  +   +D      +   + ++ + R   +     +          E
Sbjct: 61  AVEVTDFQTVETGDVIARIDDRIYRQKLAQAEATLASARAAREVATQGVHSAEANVTSGE 120

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
            A E+    L   +    ST ++       +   + +     ++         E +  +L
Sbjct: 121 AALEAARSALATAMA--DSTRTEELRARGVASTATGEQVQLALQRAEAEVAQSEAQLEVL 178

Query: 189 RALLSSHQKDLTMMKNLF--EKNAVSQNDLNQQERIVYK----STLELRENIHEQKNMLR 242
           R  ++S +  +   +      + AV    ++    +++        ++   + +  +   
Sbjct: 179 REEVNSARAQIATAEAQIATAEAAVELARIDLANTVIHAPGPGKLGQVGARVGQYVSAGT 238

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQR 271
            +           AN+ +     L  NQR
Sbjct: 239 ALVSHVGRDRWVIANFKETNLHGLALNQR 267



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/321 (10%), Positives = 85/321 (26%), Gaps = 29/321 (9%)

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           LR ++      L    +  +V +       + +     + +          ++S   + +
Sbjct: 44  LRGNVTIVAPQLSGYLSAVEVTDFQTVETGDVIARIDDRIYRQKLAQAEATLASARAARE 103

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           +    + S   N    E      R+ L++   D T  + L  +   S     Q +  + +
Sbjct: 104 VATQGVHSAEANVTSGEAALEAARSALATAMADSTRTEELRARGVASTATGEQVQLALQR 163

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           +  E+ ++  + + +   +N                    +   +   A   + + +   
Sbjct: 164 AEAEVAQSEAQLEVLREEVNSA---------------RAQIATAEAQIATAEAAVELARI 208

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 I +P  G +    +     Y      L+  V   +     A      +  +   
Sbjct: 209 DLANTVIHAPGPGKLGQVGAR-VGQYVSAGTALVSHVGRDRWVI--ANFKETNLHGLALN 265

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYY----EVILKITDLA 397
                        R   F   +    P  + +         T  +      V ++I+   
Sbjct: 266 QRVDFSVDAMGGRR---FTGRVAAFSPAAASEFSLMTGTNATGNFTKIAQRVPVRISIDP 322

Query: 398 FSDNNIELRNGFPAEVLFTAK 418
             +    L  G    V     
Sbjct: 323 GQEGGEHLAPGLSVVVSVETD 343


>gi|330466698|ref|YP_004404441.1| hypothetical protein VAB18032_13645 [Verrucosispora maris
           AB-18-032]
 gi|328809669|gb|AEB43841.1| hypothetical protein VAB18032_13645 [Verrucosispora maris
           AB-18-032]
          Length = 561

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 63/209 (30%), Gaps = 8/209 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E            + LR   D E +      +K     +A   R +Q    +G+      
Sbjct: 143 ELAARRAEHDKKYEELRAAADAELAESRERADKLRADGEAAHERAQQEAHRIGEQCRQQV 202

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +       ++  S + ++ +      ++   E             ++     ++L E+ A
Sbjct: 203 EQARAAAEALTTSARTQIHQEIQAARSKSQQELAQRRTAVEEELAERRAAAEEDLAEQRA 262

Query: 211 VSQNDLNQQ----ERIVYKSTLELRENIHEQKN----MLRHINELYDEANLEFANYLKEI 262
             + +L  Q    E+ V     + ++   E +         +    DE        L  +
Sbjct: 263 AVERELAAQRSAAEQRVSSMIADAQQYSAEIRKRADEQAAEVRRHSDEQAAAAEEQLHAV 322

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKT 291
             ++ + Q   A    +L    +  ++  
Sbjct: 323 QLEIGEQQDALAGVREELDTARRQLDETQ 351


>gi|320660430|gb|EFX27891.1| multidrug resistance protein MdtN [Escherichia coli O55:H7 str.
           USDA 5905]
          Length = 245

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 42/136 (30%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  VSADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKSEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D      D +    E               T   +    +S+          R 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRA 163

Query: 172 RSIYLNRLDLENKSSL 187
               LN + L+ +S+ 
Sbjct: 164 AEADLNAVLLQAQSAA 179



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/200 (9%), Positives = 64/200 (32%), Gaps = 20/200 (10%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V +     + + L     + +          ++++ + + +    + +       + 
Sbjct: 61  ELAVTDNQAVKQGDLLFRIDPRPYEANLAKSEASLAALDKQIMLTQRSVDAQQFGADSVN 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 RA        L   + L ++  VS  D+++       +  +L   + + ++   
Sbjct: 121 ATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTAQRAAEADLNAVLLQAQSAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +                          A   + + + +   E  T+ +P  G ++ 
Sbjct: 181 AVSGVDALVAQR-------------------AAVEADIALTKLHLEMATVRAPFDGRVIS 221

Query: 303 NQSFSSSNYAQQSQPLMKIV 322
            ++ S   +A   +P+  ++
Sbjct: 222 LKT-SVGQFASAMRPIFTLI 240


>gi|310791103|gb|EFQ26632.1| hypothetical protein GLRG_02452 [Glomerella graminicola M1.001]
          Length = 2388

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 68/213 (31%), Gaps = 11/213 (5%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
              + +  PL       +   +  +   I+ L+  +  E      L      +      R 
Sbjct: 908  QLVSKMKPL--LGATRSATEVKKRDTMIRQLQDKMRQEAEDRHRLEEDRRNVHSEMI-RI 964

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +Q L+          ++F      +         ++     ++  LE++   L       
Sbjct: 965  QQTLESERALALDKEEIF----KRLQVRETELEEKLSGAIEDQERLEDQLDDLLEAKKRA 1020

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            ++D+   +   E+ A+    L Q++  +   T EL  +I E        +E       E 
Sbjct: 1021 EQDVEKYRAQLEQAALLIARLEQEKSELSARTEELERSIQEISQKQSERSEQERLLEEEI 1080

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                K +   L    R   D  SKL  +++  E
Sbjct: 1081 ----KMLQSQLNLKDRKARDLESKLLKVDQDLE 1109



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 62/202 (30%), Gaps = 18/202 (8%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
               +     ++ ++  I   KS    L  + +  +K  E+R  +             +V 
Sbjct: 1187 SEKENAAAKLREVQAEITAIKSQQSQLEREAEDAKKLLETRLSE-----DAQADKNRQVL 1241

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               I  +   L      +     +R D+   S      L      L   K + EK    Q
Sbjct: 1242 EAQIKDLKDELFNIQKELSRERQSRDDVLLLSEHKFNTLQEEYDHLNESKIIIEKELYVQ 1301

Query: 214  NDLNQQ--------ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             D  ++        ER   ++  E+R      +       E   +A +E    +   +R+
Sbjct: 1302 QDNLRRTKEARDTAERERDEARQEIRR----LRVAKTQAEETRMQAEIEGERAVSRAARE 1357

Query: 266  LEQNQRT-FADEMSKLTILEKT 286
             E++ R        +L   E  
Sbjct: 1358 REESLRKDLDAAQERLKWFEDE 1379


>gi|311104640|ref|YP_003977493.1| RND family efflux transporter MFP subunit 5 [Achromobacter
           xylosoxidans A8]
 gi|310759329|gb|ADP14778.1| efflux transporter, RND family, MFP subunit 5 [Achromobacter
           xylosoxidans A8]
          Length = 376

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 73/233 (31%), Gaps = 21/233 (9%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
                 R +  + + D  + + LF   A  Q      +        EL     + +N   
Sbjct: 62  GSLEAARQVQVAAEVDGRVDRILFASGAQVQAGQLLVQLNDAPEQGELARLQAQARNARA 121

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            +         + A         L+Q Q  +      +  ++   EQK + +P  G ++ 
Sbjct: 122 LLERTRRLLPQQAA-----TREQLDQAQADYDQAAGDIKRVQALIEQKRVKAPFDG-VLG 175

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  +   +A+    L+ +   +   Y    +  + +  ++ G   TV    +A      
Sbjct: 176 VRRVNLGQFARAGDALVSLT-DASAVYANITLPEQAMGALRAGQPVTVTVDAHAGR---V 231

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           F+  I  ++P +      ++ Q               + +  L  G  A+   
Sbjct: 232 FEGKITTVEPQVDAGSRTVRVQ-----------ATLPNADGALAAGMYAQGQI 273



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 52/158 (32%), Gaps = 2/158 (1%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             G +     V        G + +    +G+Q+  G  L+   D      +   +   +N
Sbjct: 60  GIGSLEAARQVQVAAEVD-GRVDRILFASGAQVQAGQLLVQLNDAPEQGELARLQAQARN 118

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            R  ++  +  L       + L++A    ++   D          K        V    +
Sbjct: 119 ARALLERTRRLLPQQAATREQLDQAQADYDQAAGDIKRVQALIEQKRVKAPFDGVLGVRR 178

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           + L +        + L + +S + A ++  ++ +  ++
Sbjct: 179 VNLGQFARAGDALVSLTD-ASAVYANITLPEQAMGALR 215


>gi|308388730|gb|ADO31050.1| hypothetical protein NMBB_0592 [Neisseria meningitidis alpha710]
          Length = 1161

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +++    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQMQRIHQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|296274604|ref|YP_003657235.1| RND family efflux transporter [Arcobacter nitrofigilis DSM 7299]
 gi|296098778|gb|ADG94728.1| efflux transporter, RND family, MFP subunit [Arcobacter
           nitrofigilis DSM 7299]
          Length = 388

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 96/274 (35%), Gaps = 12/274 (4%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG  +   N  EI+    GII++   + GS + +G  L            +  K S +N+
Sbjct: 57  SGRTVIALNS-EIRPQIGGIIERRLFKEGSFVKKGDVLYKVVSSSYEATYNQAKASYENV 115

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
             ++   K      + +Y+ L K     +++  D    Y    + V     +     + +
Sbjct: 116 LANVKAAK----LKDERYEELLKINGVSKQEYEDAHVAYLQALASVAEKKAAMQSAKIDL 171

Query: 167 KLTRMRSIYLNRLDLEN--KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           + T+++S     + + +  + +L+ A  ++    +  +  ++     S   +    +++ 
Sbjct: 172 EHTQIKSPISGHIGVSSVTEGALVTAQQTTALASVKSLDPIYVDFTQSSVQMLNLRKLLK 231

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLK-----EISRDLEQNQRTFADEMSK 279
           +  ++        K     I E   E  L+  +  +      +       +      M  
Sbjct: 232 QKDMKKGNTTVSLKLEDGSIYENKGELKLQELSVDESTGSVTLRAQFPNPKNILLPGMYV 291

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             IL +    K IL P  G    ++  +++    
Sbjct: 292 NVILNEAVNSKAILVPQQGITFNSKGNATAMVVN 325


>gi|269468234|gb|EEZ79924.1| RND family efflux transporter MFP subunit [uncultured SUP05 cluster
           bacterium]
          Length = 370

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 56/162 (34%), Gaps = 18/162 (11%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +    L  +   LE  +      ++ L  L++     TI++P  G I+          AQ
Sbjct: 152 QRQTNLYAMEIQLETAKNAHLQALAGLRELDENISNATIIAPFDGVILRKMV-EIGQPAQ 210

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              P M +   +    IRA+V  + ++ + KG T   R     D  EK     + +I P+
Sbjct: 211 PGVP-MFLFGDTNQLQIRAEVPARLVKGLSKGMTLKARL----DQNEKTMPIDVVRIFPM 265

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                +             IT       N +   G   EV+ 
Sbjct: 266 ADTMGHT------------ITVKFKLPKNTQASPGMYVEVMI 295


>gi|254560180|ref|YP_003067275.1| Multidrug resistance efflux pump [Methylobacterium extorquens DM4]
 gi|254267458|emb|CAX23297.1| Multidrug resistance efflux pump [Methylobacterium extorquens DM4]
          Length = 388

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 88/293 (30%), Gaps = 23/293 (7%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E   ++     L+ L    +   ++         R    +   ++SI    +  + + S 
Sbjct: 60  EAQLDADLGAALERLKALDAQIGQLAALKKELAARLGDYQKASLQSIQQEIIIRQQRIST 119

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A   S + DL+  + L     V+ + +         S  E      E   + + ++ L
Sbjct: 120 AQANRVSAEADLSRKQTLGATGVVANSSVEAARAAAVASGNEGTIAKAELDRLNQQLDAL 179

Query: 248 YD-----EANLEF---ANYLKEISRDLEQNQRTFADEMSKLTILE----------KTREQ 289
                  E   +         E++  L   +     E +++ +LE               
Sbjct: 180 KRGTFVGEGRNDVPYSQQRGDEVTIQLANVEAQAKIERARVKLLEKQLFIERNRNDRLSS 239

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            +I  P  G I  N     SN       L +++   +  ++   +       +K G  A 
Sbjct: 240 ASIRLPFRGVIWRNNVVGGSNVI-VGNELTRLL-DCRDLFVDILLDEVDYDQIKPGDPAE 297

Query: 350 VRFPHYADIREKKFK---AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           VR    +D+   +          ++ +           +   + L +   A  
Sbjct: 298 VRLLGTSDVIAGRVNSVRGSSAAVEEVTLAAIPPKSRGKNARIRLILDQNAMQ 350


>gi|253686875|ref|YP_003016065.1| hypothetical protein PC1_0473 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753453|gb|ACT11529.1| conserved hypothetical protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 442

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 58/176 (32%), Gaps = 6/176 (3%)

Query: 26  IGIIGLITWSILL-PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           I +  L+  + L  P+  SV +  E++     V       G+I+ F V     + +G  L
Sbjct: 180 IAVPALLLLACLFIPVRQSVLAPAEVIPHQGRVVAAPLD-GVIQSFTVLPNQSVRKGEVL 238

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           + F+        D+ + ++       + E  A      +    +   +    Q+     +
Sbjct: 239 VRFDSTTLKAQADVAERALNV----AEAEHRASSQRAFQDADSKARLDFLAAQVAQKRAE 294

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                + +    I +    + +     R +       E    L    L++ + +L 
Sbjct: 295 RDYANALLSRAEIRAERDGIAVFADATRWMGKPVRTGERLMELADPALTALRIELD 350



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/173 (11%), Positives = 54/173 (31%), Gaps = 13/173 (7%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            +TL+ + ++ E+     ++ E    A+ + A    +    L+      A + ++     
Sbjct: 243 STTLKAQADVAERA---LNVAEAEHRASSQRAFQDADSKARLDFLAAQVAQKRAERDYAN 299

Query: 285 KTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHV 342
               +  I +   G  +  + +       +  + LM++  P      I   V       +
Sbjct: 300 ALLSRAEIRAERDGIAVFADATRWMGKPVRTGERLMELADPALTALRIELDVG----DAI 355

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           +    A +       +           ++ I  + +        Y +  + TD
Sbjct: 356 RLPQEAPITL----FLDSDPLTPHAALLERIAYESEQTPAGNLAYRLDARFTD 404


>gi|268318003|ref|YP_003291722.1| efflux transporter, RND family, MFP subunit [Rhodothermus marinus
           DSM 4252]
 gi|262335537|gb|ACY49334.1| efflux transporter, RND family, MFP subunit [Rhodothermus marinus
           DSM 4252]
          Length = 457

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 68/203 (33%), Gaps = 16/203 (7%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + E ++   +  L     E    LR++ +L        A  L E +R   Q      
Sbjct: 162 RVRKGEPLLEIYSPALVSTQEEYLLALRNVQQLAGTPAEADARRLLEAARRRLQFWDITD 221

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           +++ +L    + R+  T+ +P +GT++           +  Q L  ++      +++  V
Sbjct: 222 EQIRQLEATGQPRKTLTLYAPASGTVLEKHVV-EGQQIRSGQTLF-VLADLSTLWLQVDV 279

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
               +  V  G +A +  P        + +  ++ +   +                + + 
Sbjct: 280 YEHDLSWVVPGISAEITLP---YDPTVRLQGYVDYVYDTLDPATRTA------RARIVVP 330

Query: 395 DLAFSDNNIELRNGFPAEVLFTA 417
                + ++ L+ G  A      
Sbjct: 331 -----NPDLRLKPGMYAIATLQG 348



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 35/73 (47%), Gaps = 5/73 (6%)

Query: 37  LLPIEISVSSSGEILN-EDNVVEIKSPFSGIIKKFQVE-NGSQILQGTPLLTFEDIETTD 94
           + P+  +V ++  +   E  +V +     G +++  V+  G+++ +G PLL      +  
Sbjct: 120 VAPLAPTVRATARLEVNEQQLVAVSPKIEGWVERLYVDYEGARVRKGEPLLEI---YSPA 176

Query: 95  LIDLKKVSIKNLR 107
           L+  ++  +  LR
Sbjct: 177 LVSTQEEYLLALR 189


>gi|212545020|ref|XP_002152664.1| anucleate primary sterigmata (ApsB), putative [Penicillium
           marneffei ATCC 18224]
 gi|210065633|gb|EEA19727.1| anucleate primary sterigmata (ApsB), putative [Penicillium
           marneffei ATCC 18224]
          Length = 1499

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 73/220 (33%), Gaps = 4/220 (1%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G + + G  +              +  +        DTE+ +L+  N +        +
Sbjct: 734 REGGRSIAGDSIFERSASRAHARSSSRASNGTRESRLSDTERESLEVRNGELRDQVSTLK 793

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
              + L   L +Y +    +     + V ++ +      +         E + + L+ L 
Sbjct: 794 LENQGLRSQLDEYTAELEALDKAYQADVDQAEEELQILQQERDQALQVAEEREAALQDLK 853

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
           +  Q+++  + +  ++      +  + E  +      L+    E ++    I  L ++A 
Sbjct: 854 AEAQEEIDTLGDELDQKV---EECARMELTLRTQEENLKTLQAEMRSASEGILRLEEDAQ 910

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                + K + ++LE + R        L       ++ T+
Sbjct: 911 SNLRKF-KGVQQELEDSNREIESLEKNLFEANGKVQRLTV 949



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 64/200 (32%), Gaps = 4/200 (2%)

Query: 86  TFEDIETTDLI---DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
              D E   L       +  +  L+      +S LD    + + L+KA+++  +Q  + L
Sbjct: 769 RLSDTERESLEVRNGELRDQVSTLKLENQGLRSQLDEYTAELEALDKAYQADVDQAEEEL 828

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                   +              +K      I     +L+ K      +  + +     +
Sbjct: 829 QILQQERDQALQVAEEREAALQDLKAEAQEEIDTLGDELDQKVEECARMELTLRTQEENL 888

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
           K L  +   +   + + E     +  + +    E ++  R I E  ++   E    ++ +
Sbjct: 889 KTLQAEMRSASEGILRLEEDAQSNLRKFKGVQQELEDSNREI-ESLEKNLFEANGKVQRL 947

Query: 263 SRDLEQNQRTFADEMSKLTI 282
           +  +E +Q        +   
Sbjct: 948 TVQIESSQGEITFLREEQDA 967



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 64/201 (31%), Gaps = 24/201 (11%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
               +  + +L       K  +  L       E    + +E+L++             N  
Sbjct: 1016 QEVQRIMNDLNREASAAKDEIRRLKKTLSAREIDAATWKERLMELENGLREALGD-LNGT 1074

Query: 157  ISSVYRSLKMKLTRMRS----IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
             SS+  S+      + S    +   R  L+ K SLL++  +  +      + L       
Sbjct: 1075 RSSLLNSIIKLQKELESKSLDLESTRSKLDEKESLLQSREALLESHGLESRKL------- 1127

Query: 213  QNDLNQQERIVYK-----------STLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              DL  +ER   +           S  +    I +  + +  +     +    +A+  ++
Sbjct: 1128 -GDLLDRERQARRADKHSFDQALKSQQQASRTISQHNSRISDLESARSQDRKRYASLEQQ 1186

Query: 262  ISRDLEQNQRTFADEMSKLTI 282
            +   L +    +     +L++
Sbjct: 1187 LKDQLSERNALYLTLWKRLSV 1207



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 80/227 (35%), Gaps = 20/227 (8%)

Query: 84   LLTFEDIETTDLIDLK--KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            +L  E+   ++L   K  +  +++    I++ +  L   N K   L    ES + ++   
Sbjct: 902  ILRLEEDAQSNLRKFKGVQQELEDSNREIESLEKNLFEANGKVQRLTVQIESSQGEITFL 961

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              +  +   ++           + +++ + ++  L     E +           Q+   +
Sbjct: 962  REEQDADKIRISELDSELKAYRIHLQVEKEKTKELETRLAEERHQREVVGSKEKQEVQRI 1021

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLE--------------LRENIHEQKNMLRHINEL 247
            M +L  + + +++++ + ++ +    ++              LRE + +       +   
Sbjct: 1022 MNDLNREASAAKDEIRRLKKTLSAREIDAATWKERLMELENGLREALGDLNGTRSSLLNS 1081

Query: 248  YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              +   E  +     S DLE  +    ++ S L   E   E   + S
Sbjct: 1082 IIKLQKELESK----SLDLESTRSKLDEKESLLQSREALLESHGLES 1124


>gi|209809617|ref|YP_002265156.1| secretion protein, HlyD family [Aliivibrio salmonicida LFI1238]
 gi|208011180|emb|CAQ81608.1| secretion protein, HlyD family [Aliivibrio salmonicida LFI1238]
          Length = 355

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 90/301 (29%), Gaps = 34/301 (11%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            QL+           + +   +     +L     +  S+  +     +     +    + 
Sbjct: 64  NQLVKKGELLFKIDDEKYQLAVRKAEIALAQAREQEASLVADIEASRSNVRTTQVTADNA 123

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            ++   +K L +  AVS + L+       +S+  L     +   +   + +   ++    
Sbjct: 124 NREYHRIKRLAKSGAVSVSGLDSVLTKRDQSSANLMAAKQKVHALEVKLGKGDGQS---- 179

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                 + L   +   E   +++   G I   Q      +A  +
Sbjct: 180 ---------------SAVLSAKNTLKQAQLDLENTQVIAQNEGIITNMQLH-VGVFANAN 223

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           QPL+  +P     +I A    K    + KG  A V    Y  +  + F   +E  D  ++
Sbjct: 224 QPLLTFIPTDS-LWISADYREKATSKMNKGMKAEV---AYDAMPGEVFPLTVESRDYGVA 279

Query: 376 QQDNNLQTQ-EYYEV---------ILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
                   Q    EV          +++  ++    +  L  G  A V+       +   
Sbjct: 280 SAQQKANGQLSSVEVSNRWVRDAQRVRVNLISSESLSPRLFVGSRATVIIYTSGNNIIDY 339

Query: 426 I 426
           I
Sbjct: 340 I 340


>gi|168271649|dbj|BAG10264.1| kinesin family member 4A [synthetic construct]
          Length = 1232

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 8/186 (4%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             + I+     ++K++ ++ +    + E+  L+    K D  +     R  + L  L   
Sbjct: 549 QLQPIQYQYQDNIKELELEVINLQKEKEELVLELQTAKKDANQAKLSERRRKRLQELEGQ 608

Query: 146 HSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENK-SSLLRALLSSHQKD 198
            +   K  N          S  R++      +R +   R+ L  +            QK 
Sbjct: 609 IADLKKKLNEQSKLLKLKESTERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKK 668

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +  L E++   Q +L + ER   K +  LR    E     + + +   +   E A+ 
Sbjct: 669 DKEVIQLKERDRKRQYELLKLERNFQKQSNVLRRKTEEAAAANKRLKDALQKQR-EVADK 727

Query: 259 LKEISR 264
            KE   
Sbjct: 728 RKETQS 733



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/234 (10%), Positives = 86/234 (36%), Gaps = 14/234 (5%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            VE   ++ +G      +  +  + I   + + + +   ++  +       +   ++E  
Sbjct: 395 LVEENEKLSRGLSEAAGQTAQMLERIIWTEQANEKMNAKLEELRQHAACKLDLQKLVETL 454

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN----RLDLENKSS 186
            +   ++ ++ +       +++ +  ++ +  ++   + +   +  +    R      + 
Sbjct: 455 EDQELKENVEIICNLQQLITQLSDETVACMAAAIDTAVEQEAQVETSPETSRSSDAFTTQ 514

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                    ++ + + K L  K A+++  + Q +  +     + ++NI E +  + ++ +
Sbjct: 515 HALRQAQMSKELVELNKALALKEALAR-KMTQNDSQLQPIQYQYQDNIKELELEVINLQK 573

Query: 247 LYDEANLEFANYLKEI---------SRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  LE     K+           + L++ +   AD   KL    K  + K 
Sbjct: 574 EKEELVLELQTAKKDANQAKLSERRRKRLQELEGQIADLKKKLNEQSKLLKLKE 627


>gi|62087174|dbj|BAD92034.1| Chromosome-associated kinesin KIF4A variant [Homo sapiens]
          Length = 1235

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 8/186 (4%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             + I+     ++K++ ++ +    + E+  L+    K D  +     R  + L  L   
Sbjct: 552 QLQPIQYQYQDNIKELELEVINLQKEKEELVLELQTAKKDANQAKLSERRRKRLQELEGQ 611

Query: 146 HSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENK-SSLLRALLSSHQKD 198
            +   K  N          S  R++      +R +   R+ L  +            QK 
Sbjct: 612 IADLKKKLNEQSKLLKLKESTERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKK 671

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +  L E++   Q +L + ER   K +  LR    E     + + +   +   E A+ 
Sbjct: 672 DKEVIQLKERDRKRQYELLKLERNFQKQSNVLRRKTEEAAAANKRLKDALQKQR-EVADK 730

Query: 259 LKEISR 264
            KE   
Sbjct: 731 RKETQS 736



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/234 (10%), Positives = 86/234 (36%), Gaps = 14/234 (5%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            VE   ++ +G      +  +  + I   + + + +   ++  +       +   ++E  
Sbjct: 398 LVEENEKLSRGLSEAAGQTAQMLERIIWTEQANEKMNAKLEELRQHAACKLDLQKLVETL 457

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN----RLDLENKSS 186
            +   ++ ++ +       +++ +  ++ +  ++   + +   +  +    R      + 
Sbjct: 458 EDQELKENVEIICNLQQLITQLSDETVACMAAAIDTAVEQEAQVETSPETSRSSDAFTTQ 517

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                    ++ + + K L  K A+++  + Q +  +     + ++NI E +  + ++ +
Sbjct: 518 HALRQAQMSKELVELNKALALKEALAR-KMTQNDSQLQPIQYQYQDNIKELELEVINLQK 576

Query: 247 LYDEANLEFANYLKEI---------SRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  LE     K+           + L++ +   AD   KL    K  + K 
Sbjct: 577 EKEELVLELQTAKKDANQAKLSERRRKRLQELEGQIADLKKKLNEQSKLLKLKE 630


>gi|18652658|gb|AAD28718.2|AF112359_1 myosin heavy chain A [Schmidtea mediterranea]
          Length = 1344

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 71/199 (35%), Gaps = 2/199 (1%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             ++ ++  +  E   L     + + L    E +++ +   +G++    S+       S+
Sbjct: 803 SQLEKMKSRLQGEIEDLVIDVERANGLASQLEKKQKNVDKLIGEWQKKYSESQQELEVSL 862

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
             S  +    +  +     + +++   LR    +   ++  +     +   + +++ +  
Sbjct: 863 RESRTVS-AEVFKLKSQLENSQDQIESLRRENKNLSDEIHDLTEQLGEGGRNVHEIEKTR 921

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           + +     EL+  + E ++ L         A LE +   +E  R L + +  F     K 
Sbjct: 922 KRIEIERDELQHALEEAESALEQEEAKSQRAQLEISQARQESERRLAEKEEEFEGTR-KN 980

Query: 281 TILEKTREQKTILSPIAGT 299
                   Q ++ + + G 
Sbjct: 981 HQRTLESMQASLEAEVRGR 999



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 79/223 (35%), Gaps = 28/223 (12%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             + ++ +     ++ S   LR  I+   S L+ LN     LEK+ ++ E  + D   K 
Sbjct: 596 QLDQLQKSKSKIEREKS--ELRADIEDLSSQLESLNKTKGNLEKSNKALETTVSDLQNKL 653

Query: 146 HSTCSKV-----------------------FNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
                ++                           I+ + ++ +    ++     N  D  
Sbjct: 654 DELSRQLTEAGNVNNRNQHENSEMHKTLEDAESQINQLGKAKQQLQAQLEEAKQNLEDES 713

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              + L   L +   DL  ++   E+    ++D+   +R + K   EL++     +    
Sbjct: 714 RAKAKLNGDLRNAMSDLDALRESLEEEQEGKSDV---QRQLVKVQXELQQLKANSQGTGG 770

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
              E  +E   +    ++E+  +  ++ ++   ++ K+    +
Sbjct: 771 VRTEEMEEFRRKMNARIQELEEEESESNKSKCSQLEKMKSRLQ 813



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 78/219 (35%), Gaps = 24/219 (10%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREE----QLLDFLGKYHSTCSKVFNYGISS 159
           K     +   K  L+  N +++        +++    +  D L +   + SK+     S 
Sbjct: 555 KKREAELIKLKRDLEEANMQHEQALVQMRKKQQDTSNEFADQLDQLQKSKSKIEREK-SE 613

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLFEKNAVSQNDLNQ 218
           +   ++   +++ S+   + +LE  +  L   +S  Q  L  + + L E   V+ N    
Sbjct: 614 LRADIEDLSSQLESLNKTKGNLEKSNKALETTVSDLQNKLDELSRQLTEAGNVN-NRNQH 672

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY-----------------LKE 261
           +   ++K+  +    I++     + +    +EA     +                  L  
Sbjct: 673 ENSEMHKTLEDAESQINQLGKAKQQLQAQLEEAKQNLEDESRAKAKLNGDLRNAMSDLDA 732

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
           +   LE+ Q   +D   +L  ++   +Q    S   G +
Sbjct: 733 LRESLEEEQEGKSDVQRQLVKVQXELQQLKANSQGTGGV 771



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 22/215 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG--------- 143
              ID  K  +++L   +   +      + +   L      +EEQL              
Sbjct: 334 NADIDELKKDVEDLESSLQKAEQEKVAKDQQIKSLNDNVREKEEQLAKMQKEKKAADELQ 393

Query: 144 -------KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  K      +  +   + +  +L      +      R D+E     +   L  +Q
Sbjct: 394 KKTEESLKAEEEKVRNLHKAKAKLEPALDEMEENLGREQKIRADVEKAKRKVEGELKQNQ 453

Query: 197 KDLTMMK----NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--E 250
           + L  ++     L E+    + +LN     +   +  +     + K +   I EL +  E
Sbjct: 454 ELLNDLERIKSELEEQLKRKEIELNGANSKIEDESNLVATLQRKIKELQARIQELEEDLE 513

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
           A  +     ++    LE      ++ + +     +
Sbjct: 514 AERQARAKAEKAKHQLEAELEEISERLEEQGGATQ 548


>gi|83593289|ref|YP_427041.1| secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
 gi|83576203|gb|ABC22754.1| Secretion protein HlyD [Rhodospirillum rubrum ATCC 11170]
          Length = 300

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/237 (9%), Positives = 72/237 (30%), Gaps = 38/237 (16%)

Query: 204 NLFEKNAVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            + +   V + D+       +    V  +  +L     +               ++    
Sbjct: 64  PIRDNQYVHRGDILYGIDPERLRLAVAVAEADLEAKRQDMLVRQATARRHGQLRDVVSQE 123

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS----FSSSNYAQ 313
            +++           +   ++ L + +    + T+ SP+ G ++  +     ++++    
Sbjct: 124 AVQQAGGAAAVASAAYQAALATLDLAKLDLARATVRSPVDGYVINLRLRPGDYTTAGVTT 183

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-- 371
            +      V  +   +I       +I  ++ G  A +R   +     +     +E I   
Sbjct: 184 VA------VLDAARFWITGYFEETKIGQIRVGSPARIRLMGFD----RPVSGHVESIGHG 233

Query: 372 -------------PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                        P ++   + ++  +   V + +  +     ++ L  G  A +  
Sbjct: 234 IENGNDAPGPLGLPTVAATFSWVRLAQRIPVRIHVDQVPL---DVALAAGMTATIEI 287



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 38/109 (34%), Gaps = 3/109 (2%)

Query: 23  LSIIGIIGLITWSILLPIEISV-SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQG 81
           L ++    LI W      E +  +  G +    +VV I    SG +    + +   + +G
Sbjct: 17  LCLVAGATLIAWEAWSRSERTPWTRDGRV--SADVVRIAPEVSGTVSAVPIRDNQYVHRG 74

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
             L   +       + + +  ++  R  +   ++         DV+ + 
Sbjct: 75  DILYGIDPERLRLAVAVAEADLEAKRQDMLVRQATARRHGQLRDVVSQE 123


>gi|83309280|ref|YP_419544.1| membrane-fusion protein [Magnetospirillum magneticum AMB-1]
 gi|82944121|dbj|BAE48985.1| Membrane-fusion protein [Magnetospirillum magneticum AMB-1]
          Length = 320

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 44/154 (28%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            E   V +    +G +   +V  G ++  G PL   + +    + D     ++     + 
Sbjct: 33  VEGEYVRVAPTGAGTLAGVEVREGERVTAGAPLFALDTLVERAVRDQAVADLERAEAQLA 92

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +        K    +KA      +L +   K     ++      + +  +        
Sbjct: 93  DLRKGKRPDELKAIAEQKAEALAALRLSEATLKRQDILARNDYASRARLDEARAALERDR 152

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             +     +        R    + Q+ L   K L
Sbjct: 153 AQVRRLEAEYRTALLGARPDEIAAQEALVGQKRL 186


>gi|296103115|ref|YP_003613261.1| macrolide transporter subunit MacA [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057574|gb|ADF62312.1| macrolide transporter subunit MacA [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 371

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 76/233 (32%), Gaps = 28/233 (12%)

Query: 15  ASLKRMTLLSIIGIIGLITWSIL--------------LPIEISVSSSGEILNEDNVVEIK 60
                + L  ++   G   W +L                ++ +V ++G++     V ++ 
Sbjct: 7   RRKWFLLLAIVVIAGGYWLWQVLNAPVPQYQTLIVRPGELQQNVLATGKLDALRKV-DVG 65

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV---SIKNLRCHIDTEKSAL 117
           +  SG +K   VE G ++ +G  L   +  +  + I   +     ++  R     E++  
Sbjct: 66  AQVSGQLKTLSVEIGDKVKKGQLLGVIDPEQAENQIREVEATLMELRAQRAQALAERNLA 125

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMR--S 173
                +   L K     ++ L     +     +++   +  I     SL    T +    
Sbjct: 126 QVTLTRQQALAKTQAISKQDLDTAATELAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTK 185

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE------KNAVSQNDLNQQE 220
           I         + + L+       +    +  L +      K  VS+ D+   +
Sbjct: 186 IVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLK 238



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 77/262 (29%), Gaps = 52/262 (19%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           +    ++R +    ++L  + +   A  +  Q  LT  + L +  A+S+ DL+     + 
Sbjct: 95  EQAENQIREVEATLMELRAQRAQALAERNLAQVTLTRQQALAKTQAISKQDLDTAATELA 154

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               ++     + K                                         L   +
Sbjct: 155 VKQAQIGTIDAQIKRNQAS------------------------------------LDTAK 178

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHV 342
              +   I++P+AG +    +          Q   ++ +        ++A+V+   + H+
Sbjct: 179 TNLDYTKIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQVSEADVIHL 237

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G  A   F    D + +      E +   I      +    +Y    ++      +  
Sbjct: 238 KPGQNAW--FTVLGDPQTR-----YEGVLKDILPTPEKVNDAIFYYARFEVP-----NPQ 285

Query: 403 IELRNGFPAEVLFT-AKNTTLA 423
             LR    A+V         + 
Sbjct: 286 GVLRLDMTAQVHIQLTGVKNVL 307


>gi|190404708|gb|EDV07975.1| protein NUF1 [Saccharomyces cerevisiae RM11-1a]
          Length = 944

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 73/204 (35%), Gaps = 21/204 (10%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +  +  +  +  L   + T K  +  L N  DV      S+E++L + + + +   S   
Sbjct: 227 EEREQMERKLAELERKLKTVKDQVLELENNSDVQSLKLRSKEDELKNLMNELNELKSNAE 286

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     L+ K   +R       +L+ KS  +   L   Q +   +K+         
Sbjct: 287 EKDT-----QLEFKKNELRKRTNELNELKIKSDEMDLQLKQKQNESKRLKD--------- 332

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------YLKEISRDLE 267
            +LN+ E    ++  +     +E K +   I EL +E + + +        L  +   L 
Sbjct: 333 -ELNELETKFRENGSQSSAKENELKMLKNKIAELEEEISTKNSQLIAKEGKLASLMAQLT 391

Query: 268 QNQRTFADEMSKLTILEKTREQKT 291
           Q +       S+L   E+  ++  
Sbjct: 392 QLESKLNQRDSQLGSREEELKKTN 415



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 81/198 (40%), Gaps = 7/198 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           + I   K  IK LR   +   +  D L  + D L+   ++ E++L       +S      
Sbjct: 163 NEIKSLKHEIKELRKEKNDTLNNYDTLEEETDDLKNRLQALEKELDAKNKIVNSRKVDDH 222

Query: 154 N---YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +        + R L     +++++    L+LEN S +    L S + +L   KNL  +  
Sbjct: 223 SGCIEEREQMERKLAELERKLKTVKDQVLELENNSDVQSLKLRSKEDEL---KNLMNELN 279

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +++  +++  +     ELR+  +E   +    +E+  +   +  N  K +  +L + +
Sbjct: 280 ELKSNAEEKDTQLEFKKNELRKRTNELNELKIKSDEMDLQLKQK-QNESKRLKDELNELE 338

Query: 271 RTFADEMSKLTILEKTRE 288
             F +  S+ +  E   +
Sbjct: 339 TKFRENGSQSSAKENELK 356


>gi|37676809|ref|NP_937205.1| membrane-fusion protein [Vibrio vulnificus YJ016]
 gi|37201353|dbj|BAC97175.1| membrane-fusion protein [Vibrio vulnificus YJ016]
          Length = 316

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/359 (12%), Positives = 100/359 (27%), Gaps = 91/359 (25%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           II++  V+ G  + QG  L+  +      ++                E+S       +  
Sbjct: 43  IIRELPVKEGQMVSQGDVLVKLDSKNQQAVL-----------ARALAEQS-----KAQAY 86

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           +L+     R E +     +     +++     +   +S                      
Sbjct: 87  LLKLTNGERPEDIASAQARVARAEAQLIEAQKTFKRKS---------------------- 124

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
                              L  K  +SQ++ +        +  EL     E   +     
Sbjct: 125 ------------------ELVAKKLISQSEKDTALAQRDSARAELDSANEEFSKLTAGSR 166

Query: 246 -ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
            E  ++A  + A    ++    +Q         ++  IL+          P++G +    
Sbjct: 167 PEDIEQAKAQLAATQADVVLQ-QQKLDELTIVATRDGILDNLPYNLGERVPVSGIV---- 221

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
                   Q           +++ Y R  V      +   G   TV     +D      +
Sbjct: 222 -----AVIQA----------NRIPYARVYVPATYRVNFVPGKQVTVHVDGVSD----PLQ 262

Query: 365 AIIEKIDPIISQQ-----DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             +  +    S           +++  Y   + +T+ A +     L +G PA+V    +
Sbjct: 263 GTVRWVANEASFTPYYALTEEERSRLMYLAEVDLTEAARA-----LPSGVPAQVDLNGE 316


>gi|148265431|ref|YP_001232137.1| RND family efflux transporter MFP subunit [Geobacter uraniireducens
           Rf4]
 gi|146398931|gb|ABQ27564.1| efflux transporter, RND family, MFP subunit [Geobacter
           uraniireducens Rf4]
          Length = 389

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 81/294 (27%), Gaps = 45/294 (15%)

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +      R   L    G   +    +       V +        +     NR   +    
Sbjct: 65  VSSKITGRIVALYADQGDRVTRGQLLARLENDDVVQQQHQSEAGVERSASNRQVEQANLL 124

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             RA L+  +K+    K+L EKN VS+ +  Q E +   +  E+                
Sbjct: 125 KARANLALAEKNAHRFKSLAEKNLVSKLEAEQFENVYQVAKAEVARCTAA---------- 174

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF 306
                              LE      +   + L           I +P  G ++  +  
Sbjct: 175 -------------------LEAVNMEQSANRAGLAFARSKVADTLIYAPQDGVVIT-RDL 214

Query: 307 SSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      +  +    +  +++A V   Q++ V  G  A +          + F   
Sbjct: 215 EMGATVTPGMAIFTLA-DPRTVWVKANVDESQLKGVSVGKKAVITL---RSAPGEHFPGR 270

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           + ++     +    L+            D+AF+      R G  AEV    +  
Sbjct: 271 VARLGRESDRVTEELEV-----------DVAFAQPLKNYRLGEQAEVYIETEAR 313



 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 3/173 (1%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +   V  +G +  +  VV + S  +G I     + G ++ +G  L   E+ +        
Sbjct: 47  LTAQVYGNGTVEAKV-VVGVSSKITGRIVALYADQGDRVTRGQLLARLENDDVVQQQHQS 105

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEK-AFESREEQLLDFLGKYHSTCSK-VFNYGI 157
           +  ++    +   E++ L        + EK A   +     + + K  +   + V+    
Sbjct: 106 EAGVERSASNRQVEQANLLKARANLALAEKNAHRFKSLAEKNLVSKLEAEQFENVYQVAK 165

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + V R              NR  L    S +   L    +D  ++    E  A
Sbjct: 166 AEVARCTAALEAVNMEQSANRAGLAFARSKVADTLIYAPQDGVVITRDLEMGA 218


>gi|119775937|ref|YP_928677.1| HlyD family secretion protein [Shewanella amazonensis SB2B]
 gi|119768437|gb|ABM01008.1| secretion protein, HlyD family [Shewanella amazonensis SB2B]
          Length = 381

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 73/235 (31%), Gaps = 14/235 (5%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           +F         +L  K   +++       LE      RA +   Q D    K+ +E    
Sbjct: 91  LFRLDPRPFESALIQKQAALKAAEQEVPQLEAAWETARASVERAQADRDRSKSEYE---- 146

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
                    R    ++      +  ++ +          A  E          +++    
Sbjct: 147 ---RYEAGRRKGGANSPFTALELDNKRQLYFAAEAQLTAARAEEMRVRYAYESNIDGVNT 203

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA--QQSQPLMKIVPHSKLTY 329
             A   +++   E   EQ  + +P  G + +               +P+M  +P+ +  +
Sbjct: 204 KVAAARAEVAKAEFDLEQSVVRAPTDGVVTHMALR-PGMVVVPMPLRPVMSFIPNEQRYF 262

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           + A      +  +K G  A V          + FK  + ++ P +++ +     Q
Sbjct: 263 VGAFWQNSML-RLKAGDQAEVILDA---APGQVFKGRVARVLPAMAEGEVQANGQ 313



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 43/126 (34%), Gaps = 9/126 (7%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHID 111
           I    +G + +  V     I +G  L   +        I+    +   +  +  L    +
Sbjct: 66  INPLVTGKVVEVAVMPNVPIREGEVLFRLDPRPFESALIQKQAALKAAEQEVPQLEAAWE 125

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T +++++      D  +  +E  E            T  ++ N     +Y + + +LT  
Sbjct: 126 TARASVERAQADRDRSKSEYERYEAGRRKGGANSPFTALELDNKR--QLYFAAEAQLTAA 183

Query: 172 RSIYLN 177
           R+  + 
Sbjct: 184 RAEEMR 189


>gi|325920339|ref|ZP_08182276.1| multidrug resistance efflux pump [Xanthomonas gardneri ATCC 19865]
 gi|325549201|gb|EGD20118.1| multidrug resistance efflux pump [Xanthomonas gardneri ATCC 19865]
          Length = 158

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 13/141 (9%)

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            E   + S I G +  +++     +       M IVP   L  + A     Q+  ++ G 
Sbjct: 1   MEDTLLTSRIRGRV-GDKTVQVGQFLGAGTRTMTIVPQQSLYLV-ANFKETQVGLMRPGQ 58

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQ----DNNLQTQEYYEVI----LKITDLAF 398
            A +     + ++       IE + P    Q         T  + +V+    ++I  LA 
Sbjct: 59  PAEIEVDALSGVK---LHGKIESLSPGTGSQFALLPPENATGNFTKVVQRIPVRIRVLAG 115

Query: 399 SDNNIELRNGFPAEVLFTAKN 419
            +    L  G   EV    ++
Sbjct: 116 DEARKVLVPGMSVEVTVDTRS 136


>gi|283778649|ref|YP_003369404.1| phytochrome sensor protein [Pirellula staleyi DSM 6068]
 gi|283437102|gb|ADB15544.1| putative phytochrome sensor protein [Pirellula staleyi DSM 6068]
          Length = 684

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 55/159 (34%), Gaps = 3/159 (1%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
            + G +       +I  P  G++ +  V+NG+ + +G  LL     E    I   +  + 
Sbjct: 417 RAKGTLQPISKA-DIFVPQRGVVTEVLVDNGTLVEEGQVLLKMRSDELPLQIAEVEGQLL 475

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             R  +   +  +     +    E+A +  +   +    +      ++       +  ++
Sbjct: 476 AAREELAAVRDRVTNTGRQVTEQERARDQAQMSRVQVQVESLDERLQLLLDRKKQL--TV 533

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                     +  +  L+N+   +  LL +  ++ T  +
Sbjct: 534 VSPKRGRVITWDTKKSLQNRPVEVGQLLMTIAEEGTDYE 572



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 75/256 (29%), Gaps = 31/256 (12%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLELRENIHEQKNML 241
           +K+ +         + L     L E+  V  +   ++    + +   +L     E   + 
Sbjct: 426 SKADIFVPQRGVVTEVLVDNGTLVEEGQVLLKMRSDELPLQIAEVEGQLLAAREELAAVR 485

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI- 300
             +     +               + + Q        +L +L   ++Q T++SP  G + 
Sbjct: 486 DRVTNTGRQVT---EQERARDQAQMSRVQVQVESLDERLQLLLDRKKQLTVVSPKRGRVI 542

Query: 301 -----VYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ-------HVKKGYTA 348
                   Q+       +  Q LM I        +   +  K+I         +KK   +
Sbjct: 543 TWDTKKSLQNRP----VEVGQLLMTIAEEGTDYELELYMPEKRIDHIVRYRNQIKKDDPS 598

Query: 349 TVRFPHYADIREKKF--KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
                 Y  + +        + +IDP+    + + Q      V +K++     +      
Sbjct: 599 QELAVDYILMTDPGTYHYGKVTQIDPVAETHEEHGQ-----IVRIKVSTDTELNTP---Y 650

Query: 407 NGFPAEVLFTAKNTTL 422
            G            +L
Sbjct: 651 PGATVTANVNCGKASL 666


>gi|260598562|ref|YP_003211133.1| multidrug efflux system subunit MdtA [Cronobacter turicensis z3032]
 gi|260217739|emb|CBA32144.1| Multidrug resistance protein mdtA [Cronobacter turicensis z3032]
          Length = 369

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 44/133 (33%), Gaps = 4/133 (3%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   N V ++S   G +     + G Q+  G  L   +  +    +   +  +   R  +
Sbjct: 30  ITAANTVTVRSRVDGQLMAIHFKEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDRATL 89

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
              +  L     +Y  L K      ++L         +   +     +     L++  +R
Sbjct: 90  ANARRDL----ARYQQLGKTNLVSRQELDAQQALVSESEGTLKADEAAVASAQLQLDWSR 145

Query: 171 MRSIYLNRLDLEN 183
           + +    R+ L+ 
Sbjct: 146 ITAPIDGRVGLKQ 158



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 57/179 (31%), Gaps = 7/179 (3%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLKEISRDLE 267
            +++ D +Q +  + ++  +L ++     N  R +   +   + NL     L      + 
Sbjct: 62  LLAEIDPSQFKVALAQAQGQLAKDRATLANARRDLARYQQLGKTNLVSRQELDAQQALVS 121

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           +++ T   + + +   +   +   I +PI G +   +     N          +V     
Sbjct: 122 ESEGTLKADEAAVASAQLQLDWSRITAPIDGRV-GLKQVDIGNQISSGDTTGIVVLTQTH 180

Query: 328 TYIRAKVTPK-QIQHVKKGYTA--TVRFPHYADIREKKF-KAIIEKIDPIISQQDNNLQ 382
                   P+  I  V +   A   +    +      K     +  +D  I      ++
Sbjct: 181 PIDLVFTLPESDIAAVMQAQKAGKPLTVEAWDRTNSTKLSTGELLSLDNQIDATTGTIK 239


>gi|239608749|gb|EEQ85736.1| spindle-pole body protein [Ajellomyces dermatitidis ER-3]
          Length = 1236

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 56/198 (28%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             + +  ++ +  L    D  +        + D+     E +E Q        +    + 
Sbjct: 237 AAIQENTELKVTKLTMERDLHQCKKSLRRAEQDLAGCQVELQELQAQANRRHVNENVQRE 296

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            +     +             +   + +       LR  +   Q DL     L E     
Sbjct: 297 LDQMREDLESKENELHELQEELESMKENESESLQQLREEIQDLQYDLRQKNELVENQKEE 356

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +L ++++    S  EL   +   K  L  + +  +EA  E      +    +E+ ++ 
Sbjct: 357 IENLKEKQQDEKSSVAELEAELQRAKEQLEDLQKSLEEARSEAREAKSKCEEAIEEKEQA 416

Query: 273 FADEMSKLTILEKTREQK 290
             D       +       
Sbjct: 417 VEDLKELQDEMTDKSFYT 434



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/216 (9%), Positives = 63/216 (29%), Gaps = 10/216 (4%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG---- 143
           +        + ++  + +++  +   +     L  K   LE      +  L +       
Sbjct: 688 DIASKRQAAESQRQELLSVKEELRAARREESSLREKLQALEDDIVVLQATLEEERAFAGN 747

Query: 144 ------KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                        +  N        +L      + ++ +   +LE +   L++ +   Q 
Sbjct: 748 QQKSGASDLEKQLQAANKERQVARDNLANANIEIHNLRMASAELEAERDELQSQIRRIQG 807

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +     L ++    +    + E  + +   E R  +  +  +   ++     A  E   
Sbjct: 808 QVDDTYRLDQEKIDLRKSKLRLENELSRLRDEKRTLLETKDKLQADLDNEIVRAAAEENR 867

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              EI +  ++   +      +L       E+  + 
Sbjct: 868 LSGEIDQLQDKIFMSSERRDRELVAARSKAERLELR 903



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 70/217 (32%), Gaps = 12/217 (5%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           + NG        L T  D  T +   L++  +   +  I   +  ++   ++Y       
Sbjct: 526 IRNGE--NAKDVLKTRHDALTNESASLQR-DLAQAKTRISNLEEQIEAERDQYMNDTDKL 582

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             +    LD L     +                    +  RS+ L +  +E +++  +  
Sbjct: 583 RLQHRNQLDQLHDEIESLKHDIEDREGQHATDRDRWDSLKRSLELQKEKVEQQAAGYKRT 642

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL-RENIHEQKNMLRHINELYDE 250
           +   Q   T + +  +K      ++ + E+  +    EL    I E  + +    +  + 
Sbjct: 643 IDKLQNVETTLSSREDK----LQNIIESEKQRHLQDEELLNRQIKELNDDIASKRQAAES 698

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              E  +    +  +L   +R  +    KL  LE   
Sbjct: 699 QRQELLS----VKEELRAARREESSLREKLQALEDDI 731



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 71/209 (33%), Gaps = 13/209 (6%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            + + +  S++ LR  I   +  L   N   +  ++  E+ +E+  D         +++ 
Sbjct: 320 SMKENESESLQQLREEIQDLQYDLRQKNELVENQKEEIENLKEKQQDEKSSVAELEAELQ 379

Query: 154 NY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT--------MMK 203
                +  + +SL+   +  R       +   +       L   Q ++T        + +
Sbjct: 380 RAKEQLEDLQKSLEEARSEAREAKSKCEEAIEEKEQAVEDLKELQDEMTDKSFYTKGLSR 439

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI- 262
            L EK    +++LN+  +         +    E   +   I  L ++ + E A    +I 
Sbjct: 440 QLEEKAHKLEDELNKLRKEHNVLEENFQSKTREVAMLEDEIEGLKEDLSAEKARMQDDID 499

Query: 263 --SRDLEQNQRTFADEMSKLTILEKTREQ 289
               + +  +R   D   +L   +     
Sbjct: 500 LAQHERDIARRERDDISERLHHADDDIRN 528


>gi|255533588|ref|YP_003093960.1| RND family efflux transporter MFP subunit [Pedobacter heparinus DSM
           2366]
 gi|255346572|gb|ACU05898.1| efflux transporter, RND family, MFP subunit [Pedobacter heparinus
           DSM 2366]
          Length = 354

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 60/209 (28%), Gaps = 26/209 (12%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE------- 261
             V++  + +  R+       L     E  N  +   E   +  +               
Sbjct: 79  GRVTKIFVEEGSRVSKGQI--LARIDAEIINTDKETAEANLQNAIRDEARYASSFKTGGV 136

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ-SQPLMK 320
             + L+Q +    +   +L    +      I SPI G IV  +      +       + +
Sbjct: 137 TQQQLDQAKLAVENARLRLQSATRKVSDANIKSPING-IVNKKYIEVGAFVNAQGTQMFE 195

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           +V       ++  V   Q+  +K G    ++   +           I  I        N 
Sbjct: 196 LV-DVSKLKLKVNVNESQVASLKIGDKVQIKSNVFPADDY---TGTITFIAAKADNSLN- 250

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGF 409
                 + + +++ +    D    ++ G 
Sbjct: 251 ------FPIEIQVENNGKHD----IKAGM 269



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 53/145 (36%), Gaps = 5/145 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            PI++  S +G       +  + S  +G + K  VE GS++ +G  L   +        +
Sbjct: 53  APIDLDFSVNGTFAPNQELNFL-SENAGRVTKIFVEEGSRVSKGQILARIDAEIINTDKE 111

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + +++N       +++          V ++  +  +  + +   +  S   KV +  I
Sbjct: 112 TAEANLQN----AIRDEARYASSFKTGGVTQQQLDQAKLAVENARLRLQSATRKVSDANI 167

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLE 182
            S    +  K       ++N    +
Sbjct: 168 KSPINGIVNKKYIEVGAFVNAQGTQ 192


>gi|161505249|ref|YP_001572361.1| multidrug resistance protein MdtN [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866596|gb|ABX23219.1| hypothetical protein SARI_03387 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 343

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 82/259 (31%), Gaps = 24/259 (9%)

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  V++     + + L     + +          ++++ + + +    + +       +E
Sbjct: 61  ELAVVDNQQVKKGDLLFRIDPRPYEASLAKAEASLAALDKQIMLTQRSVDAQKYAASSVE 120

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
              +  RA        L   + L  +  VS  D+N+       +  +L   + + +    
Sbjct: 121 ATVAKARAAAKQASDTLRRTEPLLSEGFVSAEDVNRARTAQRAAEADLNAVLLQAQQAAS 180

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVY 302
            ++ +        A         L                     E  T+ +P  G +V 
Sbjct: 181 AVSGVDALVAQRVAVQADIALTKLH-------------------LEMATVRAPFDGRVVS 221

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            ++ S   +A   +P+  ++       I A     +++ ++ G  A +R       +   
Sbjct: 222 LKT-SIGQFASAMKPIFTLIDTDHWYII-ANFRETELKAIQAGTPAAIRLMS-DSSKT-- 276

Query: 363 FKAIIEKIDPIISQQDNNL 381
           F+  ++ I   +   D  +
Sbjct: 277 FQGKVDSIGFGVLPDDGGM 295



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 42/136 (30%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +  Q+ +G  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVVDNQQVKKGDLLFRIDPRPYEASLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             + ++D        +E                   T   +    +S+   +      R 
Sbjct: 104 LTQRSVDAQKYAASSVEATVAKARAAAKQASDTLRRTEPLLSEGFVSAEDVNRARTAQRA 163

Query: 172 RSIYLNRLDLENKSSL 187
               LN + L+ + + 
Sbjct: 164 AEADLNAVLLQAQQAA 179


>gi|34498160|ref|NP_902375.1| hypothetical protein CV_2705 [Chromobacterium violaceum ATCC 12472]
 gi|34104015|gb|AAQ60375.1| probable membrane protein [Chromobacterium violaceum ATCC 12472]
          Length = 411

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 52/136 (38%), Gaps = 3/136 (2%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +E  V +SG I     V ++ +  +G +K  +VE G ++ QG  L   +  ++ + + 
Sbjct: 75  GELEDLVLASGMIQALRQV-DVGAQTNGQLKSLKVEAGDKVKQGQLLAEIDPEDSLNALR 133

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             + S+         ++++L     +     +          D L     T  +    G+
Sbjct: 134 AAEASLDARIAQRQAKQASLRQAEQELARQRRMHAEGSTSDKDLLAA--DTSYRTLKAGL 191

Query: 158 SSVYRSLKMKLTRMRS 173
           + +   ++   ++  S
Sbjct: 192 AELQAQIRQDESQRDS 207



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 56/189 (29%), Gaps = 16/189 (8%)

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
             L ++D+  +++     L     D      L  +    ++ LN            + + 
Sbjct: 88  QALRQVDVGAQTNGQLKSLKVEAGDKVKQGQLLAE-IDPEDSLNALRAAEASLDARIAQR 146

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKE------------ISRDLEQNQRTFADEMSKLT 281
             +Q ++ +   EL  +  +       +            +   L + Q     + S+  
Sbjct: 147 QAKQASLRQAEQELARQRRMHAEGSTSDKDLLAADTSYRTLKAGLAELQAQIRQDESQRD 206

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQI 339
                     IL+P+ G ++             +Q    I+  +      +RA V    +
Sbjct: 207 SKRTLLGYTRILAPMDGEVLEI-VTQQGQTVIATQTAPVILKLADLSKVTVRADVAEADV 265

Query: 340 QHVKKGYTA 348
             ++ G   
Sbjct: 266 IRIQAGLPV 274


>gi|37520841|ref|NP_924218.1| hypothetical protein glr1272 [Gloeobacter violaceus PCC 7421]
 gi|35211836|dbj|BAC89213.1| glr1272 [Gloeobacter violaceus PCC 7421]
          Length = 420

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 78/222 (35%), Gaps = 7/222 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V   G ++ E  +  I +   G +++  V  G+ +   T L+   + E        ++ +
Sbjct: 66  VRGLGTLVPE-QIRWIPALSEGRVERIAVRPGAVVNPRTVLVELANPELEQSALDARLQL 124

Query: 104 KNLRCHIDTEK--SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISS 159
           K     +   +  +    L  +  +     + R+ +L   +    +    +      +S+
Sbjct: 125 KAAEAELANLRVQTTSQLLTQRAALAAVQSDFRQAELQRQVNDDLARQGLIGSLQAKLST 184

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V        + +     + + LE + + L    S+  + L  +  L E    +       
Sbjct: 185 VKAEELATRSDLEK-QRSEIALEARRAQLSVQ-STKVEQLRTLTRLRESQVAALKVRAGM 242

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             ++ +  LE+ + +    N+ R  +    +A ++ A    +
Sbjct: 243 SGVLQQLPLEVGQRVAPGTNLARVADPKTLKAEVKIAETQAK 284



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 83/269 (30%), Gaps = 19/269 (7%)

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             I   +     +  +   +    E R E++    G   +  + +       + +S    
Sbjct: 61  ALIRQVRGLGTLVPEQIRWIPALSEGRVERIAVRPGAVVNPRTVLVELANPELEQSALDA 120

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ--NDLNQQERIVYK 225
             ++++      +L  +++   + L + +  L  +++ F +  + +  ND   ++ ++  
Sbjct: 121 RLQLKAAEAELANLRVQTT---SQLLTQRAALAAVQSDFRQAELQRQVNDDLARQGLIGS 177

Query: 226 STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
              +L     E+      + +   E  LE       +     +  RT            K
Sbjct: 178 LQAKLSTVKAEELATRSDLEKQRSEIALEARRAQLSVQSTKVEQLRTLTRLRESQVAALK 237

Query: 286 TREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKG 345
                 + + ++G +                 L + V   K      K+   Q + +  G
Sbjct: 238 ------VRAGMSGVLQQLPL-EVGQRVAPGTNLAR-VADPKTLKAEVKIAETQAKDILLG 289

Query: 346 YTATVRFPHYADIREKKFKAIIEKIDPII 374
             A +      D         + +IDP +
Sbjct: 290 QPALI------DTHNGTAAGRVRRIDPAV 312


>gi|127511617|ref|YP_001092814.1| secretion protein HlyD family protein [Shewanella loihica PV-4]
 gi|126636912|gb|ABO22555.1| secretion protein HlyD family protein [Shewanella loihica PV-4]
          Length = 354

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 95/306 (31%), Gaps = 41/306 (13%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R+ Q+++          + +   + S   +L +    + +        + K     A  +
Sbjct: 62  RDNQIVEAGEPLFQIDPRNYRLAMQSAQANLSLAGQNIGASTAAVEVAQAKVVDAIAARN 121

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + ++    +  L  +  +SQ +L+       ++   L           + +         
Sbjct: 122 NAKEQAARVSELAGQGVLSQAELDNAIEARDRTQANLEAAEASLVQARQALGPA------ 175

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
                         Q+       M+ L   +   ++  + +P  G +   Q  +    A 
Sbjct: 176 -------------GQDNPQILAAMANLEKAQLDLQKTQVKAPSKGVVTNLQL-TLGQRAN 221

Query: 314 QSQPLMK-IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI-- 370
              P++  I P     +I A V    ++H+K G    +             +  ++ I  
Sbjct: 222 VGSPMLTFIDPRG--VWISALVRENSLEHIKVGNKVEIVLDALPGR---VLEGKVDSIGW 276

Query: 371 ----DPIISQ------QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                  I Q       D+N    + Y V +  T      N   +R G  A V F  + +
Sbjct: 277 GTGGSNNIDQNTGFLTADSNGIKAQRYPVNIVFTGTKPPGN---IRYGSQATVAFYTEQS 333

Query: 421 TLAQEI 426
           ++ + +
Sbjct: 334 SIGEFL 339



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 10/214 (4%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            R     IIG+I L+ W   L  +     + +      +V + S  +G I +  V +   
Sbjct: 8   SRKMSFYIIGLI-LVVWLYSLWADRVTPMTSDARVHAYLVRVASEVAGNITEVSVRDNQI 66

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-YDVLEKAFESREE 136
           +  G PL   +       +   + ++     +I    +A++    K  D +     ++E+
Sbjct: 67  VEAGEPLFQIDPRNYRLAMQSAQANLSLAGQNIGASTAAVEVAQAKVVDAIAARNNAKEQ 126

Query: 137 QLLDFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLDL----ENKSSLLRAL 191
                        S+   +  I +  R+         S+   R  L    ++   +L A+
Sbjct: 127 AARVSELAGQGVLSQAELDNAIEARDRTQANLEAAEASLVQARQALGPAGQDNPQILAAM 186

Query: 192 LSSHQKDLTMMKNLFE---KNAVSQNDLNQQERI 222
            +  +  L + K   +   K  V+   L   +R 
Sbjct: 187 ANLEKAQLDLQKTQVKAPSKGVVTNLQLTLGQRA 220


>gi|325102961|ref|YP_004272615.1| secretion protein HlyD family protein [Pedobacter saltans DSM
           12145]
 gi|324971809|gb|ADY50793.1| secretion protein HlyD family protein [Pedobacter saltans DSM
           12145]
          Length = 319

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 48/162 (29%), Gaps = 22/162 (13%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK-------------------VSIKN 105
           G + +  V+ G  + +G  L   +  E    +   K                     +K 
Sbjct: 45  GRVAEIYVKEGDLVKKGDTLARLDVPEVDAKLSQVKGAVKASGAQRDMANHGATANQLKQ 104

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           LR      +   +F    +D     F       Q  D +   +       +   + +  +
Sbjct: 105 LRAKQSGLQEQYNFAKKSFDRARAMFADSMMTPQAFDEITAKYQGAKAQLDAVNAEMNEA 164

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           L    T  ++    + D +   +L    ++  +K +    ++
Sbjct: 165 LHGVRTETKTAAQGQAD-QALGALQEVEIAVSEKYIIATNDM 205


>gi|254497972|ref|ZP_05110735.1| multidrug resistance efflux pump PmrA [Legionella drancourtii
           LLAP12]
 gi|254352749|gb|EET11521.1| multidrug resistance efflux pump PmrA [Legionella drancourtii
           LLAP12]
          Length = 342

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 61/171 (35%), Gaps = 17/171 (9%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLT-------FEDIETTDLIDLKKVSIK 104
             +NV  + +  SG I    V+NG  + +G  L T       +   + +  +   + ++ 
Sbjct: 53  VVNNVRPVAALTSGYITGLYVKNGDVVQKGQKLFTVFKRPYAYAQAQFSANLVSAQATLA 112

Query: 105 NLRCHIDT-------EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--KVFNY 155
            L+   +        E+     +    +  +K +  R   L+        T +    +  
Sbjct: 113 ALKATYERDLKLSKNEERNYIKVKQDDEKYQKGYRLRSVSLITLQNSEQETLAAKNRWEA 172

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
            +  +         +  +I   R  L+N    L+ L   + +D  +++NLF
Sbjct: 173 SLQQLEIDKYQIKAQEGAIISTRAQLKNAKVNLQ-LTDVYAQDNGIIQNLF 222



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 69/174 (39%), Gaps = 11/174 (6%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA--VSQNDLNQQERIVYKSTLELRENIHE 236
            +L +  + L AL +++++DL + KN  E+N   V Q+D   Q+    +S   +     E
Sbjct: 102 ANLVSAQATLAALKATYERDLKLSKN-EERNYIKVKQDDEKYQKGYRLRSVSLITLQNSE 160

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q+ +            LE   Y       ++  +       ++L   +   +   + +  
Sbjct: 161 QETLAAKNRWEASLQQLEIDKY------QIKAQEGAIISTRAQLKNAKVNLQLTDVYAQD 214

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
            G I     F+       +QPL  +V  ++  YI+A      +  V+KG   TV
Sbjct: 215 NGIIQNL-FFTLGTPVNVNQPLFSLV-DTQNIYIQANFNETDLSRVRKGAKVTV 266


>gi|256830129|ref|YP_003158857.1| RND family efflux transporter MFP subunit [Desulfomicrobium
           baculatum DSM 4028]
 gi|256579305|gb|ACU90441.1| efflux transporter, RND family, MFP subunit [Desulfomicrobium
           baculatum DSM 4028]
          Length = 393

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 83/227 (36%), Gaps = 4/227 (1%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQ--VENGSQILQGTPLLTFEDIETTDLIDLKK 100
            V   G ++       I++  +GI+++       G  + +G+PLL  +D +   ++  ++
Sbjct: 70  VVQVLGTVVPARQTQ-IRAEVAGIVREIAPGFLPGGIVTKGSPLLRLKDEDFRLIVTSRE 128

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE-EQLLDFLGKYHSTCSKVFNYGISS 159
             +++    ++ E        +++D+LE   ++ E   L     +     +K+     + 
Sbjct: 129 AELQSAAAALELEIGYQQVARHEWDLLEMTGKAGESSDLALRKPQLAQARAKLRQAEAAL 188

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
               L +K T++ + +   +  +N     R  ++     L      + + A+  + L   
Sbjct: 189 EQARLDLKRTKLTAPFTALVLDKNVELGSRVSITDTLATLVDTGEFWVEAAIPVDRLPWI 248

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
                 S       + +     R  + L    +LE    L  +   L
Sbjct: 249 TLPGKNSPGSKVRILSQASGAERSGHILRLRGDLEEQGRLARVQVSL 295



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/121 (10%), Positives = 36/121 (29%), Gaps = 2/121 (1%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           +  +E  +  +   L   I  Q+      + L        ++ L      L Q +     
Sbjct: 124 VTSREAELQSAAAALELEIGYQQVARHEWDLLEMTGKAGESSDLALRKPQLAQARAKLRQ 183

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             + L       ++  + +P    ++        +    +  L  +V  +   ++ A + 
Sbjct: 184 AEAALEQARLDLKRTKLTAPFTALVLDKNV-ELGSRVSITDTLATLV-DTGEFWVEAAIP 241

Query: 336 P 336
            
Sbjct: 242 V 242


>gi|254505954|ref|ZP_05118099.1| multidrug resistance efflux pump [Vibrio parahaemolyticus 16]
 gi|219551177|gb|EED28157.1| multidrug resistance efflux pump [Vibrio parahaemolyticus 16]
          Length = 376

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 72/248 (29%), Gaps = 16/248 (6%)

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           ++     +       +F          +  K  +++      L LE++    +A      
Sbjct: 76  EVPVQPNQPLQQGDVLFKIDPIPYEAEVAKKKAQIKEASQGALGLESQLQAAKAAEVKAI 135

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +             +Q + ++ +R   K      + +  ++   +      + A     
Sbjct: 136 AERDK----------AQREFDRYQRGYDKGAF-TEQQLDTRRQAFKAAQAAVESAQAGVE 184

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYAQQS 315
                +  ++     T A  +++L   E   EQ  + +P  G                  
Sbjct: 185 QAELALDSEIGGENTTVARLLAELRQAEFDLEQTVVRAPTDGFATQLALRPGVMAVPLPL 244

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            P+M  V      Y  A      +Q +K GY A   F        K FK  +  + P I 
Sbjct: 245 APVMTFVHTEDKIYTAA-FRQNSLQRLKPGYEAEFLFRALP---GKVFKGEVIDVLPAIG 300

Query: 376 QQDNNLQT 383
           +     + 
Sbjct: 301 ESQFQARG 308



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 46/147 (31%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSAL 117
           G + +  V+    + QG  L   + I     +  KK  IK        L   +   K+A 
Sbjct: 72  GKVIEVPVQPNQPLQQGDVLFKIDPIPYEAEVAKKKAQIKEASQGALGLESQLQAAKAAE 131

Query: 118 DFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
                + D  ++ F+  +       F  +   T  + F    ++V  +         ++ 
Sbjct: 132 VKAIAERDKAQREFDRYQRGYDKGAFTEQQLDTRRQAFKAAQAAVESAQAGVEQAELALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                     + L A L   + DL   
Sbjct: 192 SEIGGENTTVARLLAELRQAEFDLEQT 218


>gi|169595884|ref|XP_001791366.1| hypothetical protein SNOG_00689 [Phaeosphaeria nodorum SN15]
 gi|160701179|gb|EAT92184.2| hypothetical protein SNOG_00689 [Phaeosphaeria nodorum SN15]
          Length = 1609

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 72/199 (36%), Gaps = 4/199 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +   + D  +   +     ++ E         +  ++ + ++ R + L   L + +    
Sbjct: 922  QEQLMRDQYQQQTQGRLAELERENLNARAQYERDQLMLQQYDQRMKALEGELAQMNQNYQ 981

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +        + R+L+ +L   RS Y +   L ++       L    K + +  N  ++  
Sbjct: 982  QQIGSKDDQI-RALQEQLNTWRSKYESLAKLYSQLRHEHLQLLQKFKQVQLKANSAQEAI 1040

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              ++ L   +R +    LEL + I E+   L   +        E     +E+   L++  
Sbjct: 1041 DGRDRL---QRELKTKNLELADMIRERDRALMEKDRTTGGHRDELEKVKRELRAALDRAD 1097

Query: 271  RTFADEMSKLTILEKTREQ 289
             +   + S+L+ +     +
Sbjct: 1098 NSERGKGSELSAMLSRHNR 1116



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 65/207 (31%), Gaps = 4/207 (1%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +     +  D ++  ++         +     +  + D  E+     E+  L        
Sbjct: 870  DQRRQQEEFDAEQRRLQQQWEE-AQRQQQQSQMQAQRDFEEQQRLQAEQARLAQEQLMRD 928

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +     ++ + R       +     L     + +   L   L+   ++        +
Sbjct: 929  QYQQQTQGRLAELERENLNARAQYERDQLMLQQYDQRMKALEGELAQMNQNYQQQIGSKD 988

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEAN--LEFANYLKEISR 264
                +  +     R  Y+S  +L   + HE   +L+   ++  +AN   E  +    + R
Sbjct: 989  DQIRALQEQLNTWRSKYESLAKLYSQLRHEHLQLLQKFKQVQLKANSAQEAIDGRDRLQR 1048

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
            +L+      AD + +       +++ T
Sbjct: 1049 ELKTKNLELADMIRERDRALMEKDRTT 1075



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 20/189 (10%), Positives = 53/189 (28%), Gaps = 6/189 (3%)

Query: 105  NLRCHIDTEKSALDFLNNKYDV-LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             L      EK           V  E   E  +        ++ +   ++      +  + 
Sbjct: 837  ALPARPRNEKPEESAPPRAPSVDPEPINEFWKNDQRRQQEEFDAEQRRLQQQWEEAQRQQ 896

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
             + ++   R     +     ++ L +  L   Q        L E     + +        
Sbjct: 897  QQSQMQAQRDFEEQQRLQAEQARLAQEQLMRDQYQQQTQGRLAE----LERENLNARAQY 952

Query: 224  YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             +  L L++     K +   + ++      +  +   +I   L++   T+  +   L  L
Sbjct: 953  ERDQLMLQQYDQRMKALEGELAQMNQNYQQQIGSKDDQIRA-LQEQLNTWRSKYESLAKL 1011

Query: 284  EKTREQKTI 292
                  + +
Sbjct: 1012 YSQLRHEHL 1020


>gi|73955594|ref|XP_546602.2| PREDICTED: similar to LYST-interacting protein LIP8 isoform 1
           [Canis familiaris]
          Length = 903

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 72/203 (35%), Gaps = 5/203 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E       +   ++ L+  ++ E+ A      +   +E  + + +E++   L K      
Sbjct: 337 EARAGQLSEHRQLETLKLALEEERQA---WVQQERQMEGRYGALQEEVQAQLEKEKENTQ 393

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +       +  + L +  + +R +         +   L+  +S  Q      +   E   
Sbjct: 394 REAQAAREA-QKQLVLVQSEVRRLEGELDTARRERDALQLEMSLVQARYESQRIQMESEL 452

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             Q +    ER+       LR+    +++  + + +L  +   E +  L +   ++ + +
Sbjct: 453 AVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLNGQHQQELSTQLAQFKVEMAE-R 511

Query: 271 RTFADEMSKLTILEKTREQKTIL 293
                ++++   L   REQ  + 
Sbjct: 512 EERQQQVAQEYELRLAREQARVR 534



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 61/202 (30%), Gaps = 2/202 (0%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                 +     ++   +     ++   + L  +   L  + E  +++      +     
Sbjct: 280 THLEQSLSEAVEALNREQESARLQQREKETLEEERQALSLSLELEQQRCRSLQEERDEAR 339

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +   +         L ++  R   +   R       +L   + +  +K+    +   +  
Sbjct: 340 AGQLSEHRQLETLKLALEEERQAWVQQERQMEGRYGALQEEVQAQLEKEKENTQREAQAA 399

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ- 268
             +Q  L   +  V +   EL     E+  +   ++ +      +      E++  LEQ 
Sbjct: 400 REAQKQLVLVQSEVRRLEGELDTARRERDALQLEMSLVQARYESQRIQMESELAVQLEQR 459

Query: 269 -NQRTFADEMSKLTILEKTREQ 289
             +R    + S L      RE 
Sbjct: 460 VTERLAQAQESSLRQAASLREH 481


>gi|86141783|ref|ZP_01060307.1| efflux transporter, MFP component, RND family protein
           [Leeuwenhoekiella blandensis MED217]
 gi|85831346|gb|EAQ49802.1| efflux transporter, MFP component, RND family protein
           [Leeuwenhoekiella blandensis MED217]
          Length = 417

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/318 (12%), Positives = 103/318 (32%), Gaps = 84/318 (26%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +  +G ++    +  + +   G +++  VE+G+ + +G P+L   + +            
Sbjct: 62  IPVNGVVMPITTI-YLDALEGGRVEEKFVEDGAIMKKGEPILRLSNTD------------ 108

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
                                  LE +  ++E Q+ + L +   + +      I+ +   
Sbjct: 109 -----------------------LELSLVNQETQVYNLLTQMQISQNAARQNTINKL--- 142

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
                              N+ + +   L   ++   + K L++K+A+++ DL + +   
Sbjct: 143 -------------------NQYTDVENSLIEAKRLYELNKKLYDKDAIARQDLIKSQNDY 183

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
                  +E +   K +L   +    +   + ++  +     LE  +R  AD        
Sbjct: 184 NYQ----KERMQLAKQILEQDSIAVKQEKNQVSSSYQRTQNALELMRRKVADL------- 232

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT---YIRAKVTPKQIQ 340
                   + +P+ G +    +        + + L +I     +     +R  +    I 
Sbjct: 233 -------VVKAPVDGQLTSLDA-EIGQSKNKGERLGQI----DVLSGYKVRVDIDEHYIS 280

Query: 341 HVKKGYTATVRFPHYADI 358
            +  G T +  F      
Sbjct: 281 RIYTGQTGSFDFDGKNYT 298


>gi|327399568|ref|YP_004340437.1| RND family efflux transporter MFP subunit [Hippea maritima DSM
           10411]
 gi|327182197|gb|AEA34378.1| efflux transporter, RND family, MFP subunit [Hippea maritima DSM
           10411]
          Length = 359

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 43/133 (32%), Gaps = 5/133 (3%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
             A+SQ    + +      TL+  E  H++   L  +     E   +  + L  +S  + 
Sbjct: 107 SQAISQQKSLKAKLSAATLTLKNLELTHKRTAELLKVKGASIEQFQKEEDQLASVSSQIS 166

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
             +       S +  L        I SP+ G +      +  +     +P+  I      
Sbjct: 167 SLKSQIKATKSNIKHLRILLSYGIIKSPVDGVVSKKFLNT-GDVVMPGKPICSISSTGGK 225

Query: 328 -TYIRAKVTPKQI 339
              +R    P+ I
Sbjct: 226 YLLLR---LPEDI 235



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 39/108 (36%), Gaps = 3/108 (2%)

Query: 70  FQVEN-GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
             V+N G ++ +G  +   +   T   I       K+L+  +      L  L   +    
Sbjct: 79  MYVKNIGDKVKKGEVIARLDVSATKAAISQAISQQKSLKAKLSAATLTLKNLELTHKRTA 138

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           +  + +   +  F  +     S   +  ISS+   +K   + ++ + +
Sbjct: 139 ELLKVKGASIEQFQKEEDQLAS--VSSQISSLKSQIKATKSNIKHLRI 184


>gi|260770692|ref|ZP_05879622.1| membrane fusion protein of RND family multidrug efflux pump [Vibrio
           furnissii CIP 102972]
 gi|260614273|gb|EEX39462.1| membrane fusion protein of RND family multidrug efflux pump [Vibrio
           furnissii CIP 102972]
 gi|315178552|gb|ADT85466.1| Secretion protein HlyD [Vibrio furnissii NCTC 11218]
          Length = 383

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 70/196 (35%), Gaps = 7/196 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           P+E++ +  G   +   + E++   SGI+       GS + +G  L   +       +  
Sbjct: 52  PVEVTSTLPGR-TSAYRIAEVRPQVSGIVTNRLFVEGSMVNKGEVLFELDPSTYKAALAS 110

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            K ++      +    +  +F   +Y  L       ++   D    Y    + V     +
Sbjct: 111 AKANLAKSEATL----AQAEFQAKRYRELVAKKSVSQQDYEDAQASYKEALASVEASKAN 166

Query: 159 SVYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
                + +  T++ +    R+   L  + +L+ A  ++    +  +  L+   +   N+L
Sbjct: 167 VNSAQINLDYTKITAPISGRIGRTLITEGALVTANQTNALATIQQLDPLYVDLSQPSNEL 226

Query: 217 NQQERIVYKSTLELRE 232
            +  +   K   EL  
Sbjct: 227 LKLRQSAGKENQELAG 242


>gi|261364146|ref|ZP_05977029.1| multidrug efflux periplasmic linker protein BpeA [Neisseria mucosa
           ATCC 25996]
 gi|288567733|gb|EFC89293.1| multidrug efflux periplasmic linker protein BpeA [Neisseria mucosa
           ATCC 25996]
          Length = 425

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 56/171 (32%), Gaps = 2/171 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GII+K   + GS +  G PL   +       ++  +  + + +  +   K+  D
Sbjct: 81  VRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEANLESSRAQLASAQATLA--KANAD 138

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  V   A   ++        +      K     I S   +L              
Sbjct: 139 LARYKPLVAADAISKQDYDAAVTAKRSAEASVKAAQAAIKSAGINLNRARITAPISGFIG 198

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
               ++ +LL A  ++    +     ++     S  ++ +  + V +  L 
Sbjct: 199 QSKVSEGTLLNAGDTTVLATIRQTNPMYVNITQSATEVMKLRQQVAEGKLS 249


>gi|218462926|ref|ZP_03503017.1| polysaccharide export protein [Rhizobium etli Kim 5]
          Length = 391

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 60/200 (30%), Gaps = 6/200 (3%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
              +    +     SI      +   ++ +D         E  F+        F    ++
Sbjct: 119 HSTQLVGELREINHSILRSTARLARLQAEIDGAQ------EITFDQATGADQQFAAGIYN 172

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +F    +++ R  +        +      LE K +     + S +  L  +K+L +
Sbjct: 173 EERIIFRARANALERQARAFTELRDLLTTEISTLEEKLTGADDNIKSVEDQLLSVKSLVQ 232

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           K     +     ER++     +  + +       + I+E        +     E++ + +
Sbjct: 233 KGLTVSSRQLDLERLLTTYRSDKLDLVTAVMRGRQAISETTRNLEGLYDARRSEVAIEAQ 292

Query: 268 QNQRTFADEMSKLTILEKTR 287
             + +      K    +K  
Sbjct: 293 SERASLDQMKMKRDTTQKLL 312


>gi|158295904|ref|XP_557151.3| AGAP006472-PA [Anopheles gambiae str. PEST]
 gi|157016256|gb|EAL40091.3| AGAP006472-PA [Anopheles gambiae str. PEST]
          Length = 2261

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 74/213 (34%), Gaps = 15/213 (7%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             Q+      +  E  E        +  ++     +    + LD L        +A + R 
Sbjct: 1437 EQVSADKATVELEHSECPSRQQALQNQLEEREVEMLRYITELDAL--------RAEQIRL 1488

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             +  + + +     +    + + S+  ++   +    ++   +L+ E      +   S+ 
Sbjct: 1489 VEQQNGVKRELEAKAAALQHELDSLQGNVSQLMNENEALLREQLEGEKSQ---QERTSAD 1545

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             ++L  +++  ++   S+  ++Q ER +     EL     E     R  +E  ++ + E 
Sbjct: 1546 AEELLKLRSCRDE---SERLVSQLERDLATVRAELEMVRTELLEEKRRRDE-IEQTDRER 1601

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            +  +KE +  L        DE  +L        
Sbjct: 1602 SEAVKEETERLRHAITALEDEKQRLQEATDRLR 1634



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 80/261 (30%), Gaps = 30/261 (11%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
            +  S +  G      +  +T+  I+  +  I   R     + +  D L+ +     +  E
Sbjct: 869  QEASDVQLGELKSKLDGGQTS--IERLEKEIVQWREKFAAQTTEYDELSTQLMDQMQDNE 926

Query: 133  SREEQLLD-----FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
               +Q  +        +      +   + +  +  SL+       ++      L  + S 
Sbjct: 927  DLRKQFEEAKQTALANEKDVQRREELEHEMGPLRESLEKANAEREALQRVCDSLREEVSA 986

Query: 188  LRALLSSHQKDLTMM----KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
            L+A + SH   +  +    + L  +    +  L +      ++  EL      ++  +  
Sbjct: 987  LKASIESHASQVETIVAKKEQLSVERDEVKIRLEEAITKQKETMKELETVQAAKQAEVAT 1046

Query: 244  INELYDEANLEF-----------------ANYLKEISRDLEQNQ--RTFADEMSKLTILE 284
            +NE  D    E                  A     +S  L Q Q  +  A   S     E
Sbjct: 1047 VNEEIDRLKQEIVKLETSIGEQSVEKELLATENSRLSAQLVQLQKEQQLAGAASDQKARE 1106

Query: 285  KTREQKTILSPIAGTIVYNQS 305
              +  + +     G +V  + 
Sbjct: 1107 DLQRLQQLKDEADGRVVQLEV 1127


>gi|289662043|ref|ZP_06483624.1| fusaric acid resistance protein [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 307

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 72/217 (33%), Gaps = 19/217 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V +            +  E +  + + +  +     L D    E A   +    ++++ 
Sbjct: 77  VVDRARYAIALEQARAALAERQATLTQLRREIARDRSLQDLVAAEDAEVRR---SNVQKA 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   A   S + + +   ++  + SP  G +   ++    +Y    +P++ ++  +    
Sbjct: 134 QAAVATAQSAVDLAQLNLDRTQVRSPADGHVTD-RTVRVGDYVTAGRPVVAVL-DTGSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQD 378
           +       ++Q V  G    V+            ++I   I+           P ++   
Sbjct: 192 VDGYFEETRLQGVHPGQRVDVQLMGEPVTLHGHVQSIAAGIEDRYRSGSAGALPNVTPAF 251

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + ++  +   V + +  +     ++ L  G  A V  
Sbjct: 252 DWVRLAQRIPVRIALNQV---PAHVHLIAGRTATVSI 285



 Score = 40.0 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 10/96 (10%), Positives = 33/96 (34%), Gaps = 1/96 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG+++   V +   + +G  L   +       ++  + ++   +  +   +  +    + 
Sbjct: 55  SGLVESVAVADNQPVTRGQLLFVVDRARYAIALEQARAALAERQATLTQLRREIARDRSL 114

Query: 124 YDVLEKA-FESREEQLLDFLGKYHSTCSKVFNYGIS 158
            D++     E R   +        +  S V    ++
Sbjct: 115 QDLVAAEDAEVRRSNVQKAQAAVATAQSAVDLAQLN 150


>gi|211904107|ref|NP_001129995.1| slow myosin heavy chain 3 [Danio rerio]
 gi|209972644|tpg|DAA06338.1| TPA_exp: slow myosin heavy chain 3 [Danio rerio]
          Length = 1938

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 75/214 (35%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   LR  +D   S ++ +      LEK   + E+Q+ ++  KY
Sbjct: 1208 QIDNLQRVKQKLEKEKS--ELRLELDDVVSNMEQIAKAKANLEKMCRTLEDQMSEYRTKY 1265

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                + R L+ K + +  +   +     +   L+  L    
Sbjct: 1266 EEGQRSINDFTMKKAKLQTENGELSRQLEEKDSLVSQLTRGKQSYTQQIEDLKRQLEEEV 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +        L +Q     ++  EL+ ++ +  + +      Y+   ++  
Sbjct: 1326 KAKNALAHAVQSARHDAELLREQYEEEQEAKAELQRSLSKANSEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L++  + L Q  +   + +  +     + E+ 
Sbjct: 1386 EELEDAKKKLAQRLQDAEEAVEAVNAKCSSLEKT 1419



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/207 (11%), Positives = 64/207 (30%), Gaps = 6/207 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E  ++ +  + +       I+  K            LE+A    E        K+  + S
Sbjct: 1144 ELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATASTLRKKHADSVS 1203

Query: 151  KV------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +             + +        +  +  N   +    + L  +  + +  ++  + 
Sbjct: 1204 DLGEQIDNLQRVKQKLEKEKSELRLELDDVVSNMEQIAKAKANLEKMCRTLEDQMSEYRT 1263

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             +E+   S ND   ++  +     EL   + E+ +++  +         +  +  +++  
Sbjct: 1264 KYEEGQRSINDFTMKKAKLQTENGELSRQLEEKDSLVSQLTRGKQSYTQQIEDLKRQLEE 1323

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
            +++          S     E  REQ  
Sbjct: 1324 EVKAKNALAHAVQSARHDAELLREQYE 1350



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 67/189 (35%), Gaps = 5/189 (2%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISS 159
              ++L   +   K++ +   +  + +++  ++ +E++ D   +   +   +         
Sbjct: 1475 EARSLSTELFKLKNSYEESLDHLESMKRENKNLQEEIADLTEQIGESGKNIHELEKMRKQ 1534

Query: 160  VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            + +      T +     +    E K   LRA L  +Q    + + L EK+   +     Q
Sbjct: 1535 LEQEKAEIQTALEEAEGSLEHEEGKI--LRAQLEFNQVKADIERKLSEKDEEMEQAKRNQ 1592

Query: 220  ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            +R++      L      +   LR   ++  + N E    L + +R   + Q+        
Sbjct: 1593 QRMIDTLQSSLESETRSRNEALRLKKKMEGDLN-EMEIQLSQANRQASEAQKQLKSLHGH 1651

Query: 280  LTILEKTRE 288
            L   +   +
Sbjct: 1652 LKDAQLQLD 1660



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 68/217 (31%), Gaps = 20/217 (9%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            +        + +++     ++ E     ++ L+F   K D+  K  E  EE  ++   + 
Sbjct: 1534 QLEQEKAEIQTALEEAEGSLEHEEGKILRAQLEFNQVKADIERKLSEKDEE--MEQAKRN 1591

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                       + S  RS    L   + +  +  ++E + S      S  QK L  +   
Sbjct: 1592 QQRMIDTLQSSLESETRSRNEALRLKKKMEGDLNEMEIQLSQANRQASEAQKQLKSLHGH 1651

Query: 206  FEKNAVSQNDLNQ-----------QERIVYKSTLELRENIH--EQKNMLRHINELYDEAN 252
             +   +  +D  +            ER       EL E     EQ    R + E      
Sbjct: 1652 LKDAQLQLDDALRGNDDLKENIAIVERRNNLLQAELDELRSLVEQTERGRKLAEQELMDV 1711

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E    L   +  L   ++    + ++L    +   Q
Sbjct: 1712 SERVQLLHSQNTSLLNQKKKLEGDNTQLQTEVEEAVQ 1748


>gi|241205294|ref|YP_002976390.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859184|gb|ACS56851.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 437

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 79/252 (31%), Gaps = 28/252 (11%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-NIHEQKN 239
            E +   +            ++  L +  A    +  +  R   +  L  +  ++ + ++
Sbjct: 161 YEGRIVTVEVEAGDRVAVGQVLVRLDDAGARFALEGAEIARRSAELALAAKSIDLSQARS 220

Query: 240 MLRHINELYD------EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            L  I  L        +   E             Q ++  A     +    +  E  T+ 
Sbjct: 221 SLTRIERLAGRDAMSAQTLEEAKTAFDTAENAALQARQDVAKADLDIDRAREQVEALTVR 280

Query: 294 SPIAGTIVYNQSFSSSNY------AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT 347
           +PI+GT+    +             ++++ L+ I        I A V    I  ++ G  
Sbjct: 281 APISGTVTRLTAHVGDTVLSREDSVRENESLLAIA-DMANMVIDADVAEANIALMRPGLR 339

Query: 348 ATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
                  + D+    F   + KI P+IS++           V L+++  +   +   +R 
Sbjct: 340 GEAALDGFPDL---PFAVEVSKIAPVISREKGT--------VTLRLSLSSPPPD---MRP 385

Query: 408 GFPAEVLFTAKN 419
              A +      
Sbjct: 386 AMAARIRLVVGE 397



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 54/160 (33%), Gaps = 13/160 (8%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V+ SG ++  D           I+   +VE G ++  G  L+  +D      ++  +++ 
Sbjct: 143 VTGSGYVVASDIATVFSKYEGRIVT-VEVEAGDRVAVGQVLVRLDDAGARFALEGAEIAR 201

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           ++    +  +   L    +    +E+            L    +  ++      ++   +
Sbjct: 202 RSAELALAAKSIDLSQARSSLTRIER------------LAGRDAMSAQTLEEAKTAFDTA 249

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               L   + +    LD++     + AL        T+ +
Sbjct: 250 ENAALQARQDVAKADLDIDRAREQVEALTVRAPISGTVTR 289


>gi|148684607|gb|EDL16554.1| nuclear mitotic apparatus protein 1, isoform CRA_c [Mus musculus]
 gi|148684608|gb|EDL16555.1| nuclear mitotic apparatus protein 1, isoform CRA_c [Mus musculus]
          Length = 2106

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/205 (9%), Positives = 66/205 (32%), Gaps = 2/205 (0%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           ++ +    ++  +         +  E+S  +    +   L    +S    L     +   
Sbjct: 426 DNTQLQTRVETLECERGKQEAQLLAERSRFEDEKQQLASLIADLQSSVSNLSQAKEEL-E 484

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL-LSSHQKDLTMMKNLF 206
             S+     +++   S+      ++        L+ ++   +A  L + Q+   + + L 
Sbjct: 485 QASQAQGAQLTAQLTSMTGLNATLQQRDQELASLKEQAKKEQAQMLQTMQEQEQVAQGLR 544

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           ++     + L  +E+ + ++  E      +    L  + E  + +  E     +++    
Sbjct: 545 QQVEQLSSSLKLKEQQLEEAAKEQEATRQDHAQQLAIVAEAREASLRERDTARQQLETVE 604

Query: 267 EQNQRTFADEMSKLTILEKTREQKT 291
           ++          +L      R+   
Sbjct: 605 KEKDAKLESLQQQLQAANDARDNAQ 629



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 3/191 (1%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV---FNYGI 157
           + +  L+       +    L  + + LE     +E QLL    ++     ++        
Sbjct: 411 LQLDTLKQEAAKLATDNTQLQTRVETLECERGKQEAQLLAERSRFEDEKQQLASLIADLQ 470

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           SSV    + K    ++       L  + + +  L ++ Q+    + +L E+    Q  + 
Sbjct: 471 SSVSNLSQAKEELEQASQAQGAQLTAQLTSMTGLNATLQQRDQELASLKEQAKKEQAQML 530

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q  +   +    LR+ + +  + L+   +  +EA  E     ++ ++ L          +
Sbjct: 531 QTMQEQEQVAQGLRQQVEQLSSSLKLKEQQLEEAAKEQEATRQDHAQQLAIVAEAREASL 590

Query: 278 SKLTILEKTRE 288
            +     +  E
Sbjct: 591 RERDTARQQLE 601



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 76/209 (36%), Gaps = 17/209 (8%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              L  + +    +LR   DT +  L+ +  + D   ++ + + +   D      ++ ++
Sbjct: 576 AQQLAIVAEAREASLRER-DTARQQLETVEKEKDAKLESLQQQLQAANDARDNAQTSVTQ 634

Query: 152 VFN------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                      I  ++  ++      R +     +LE +       L + Q+  T  + +
Sbjct: 635 AQQEKAELSQKIGELHACIEASHQEQRQVQARVTELEAQ-------LKAEQQKTTEREKV 687

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR- 264
            ++ A  Q  L   E  +  +   L E      + L+       E   E  + +++  R 
Sbjct: 688 VQEKAQLQEQLRALEESLKITKGSLEEEKRRAADALKEQQCRATEMEAESRSLMEQRERE 747

Query: 265 --DLEQNQRTFADEMSKLTILEKTREQKT 291
             +LEQ +       +++  LE+  + +T
Sbjct: 748 QKELEQEKAGRKGLEARIQQLEEAHQAET 776



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 83/234 (35%), Gaps = 18/234 (7%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC--HIDTEKSALDFLNNKYDVLE-- 128
              G    Q + L          +  +++  ++  +    +   +  +   N +   L+  
Sbjct: 850  SEGQPGQQQSQLAQLHASLAKAIQQVQEKEVRAQKLVDDLSALQEKMAATNKEVACLKTL 909

Query: 129  --KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
              KA E +E   L+ L +     ++  +       R        ++++      +  +  
Sbjct: 910  VLKAGEQQETASLELLKEPPRAANRASDRLGEQQGRPFSSTHAAVKAMEREAEQMGGELE 969

Query: 187  LLRALL--------SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             LRA L            +    +  L ++   +Q DL Q++    +  + L+  ++EQ+
Sbjct: 970  RLRAALIKSQGQQQEERGQQEREVARLTQERGQAQADLAQEKAAKAELEMRLQNTLNEQR 1029

Query: 239  NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                 + E    A  E     +E    L + +   A + ++L  L++T EQ  I
Sbjct: 1030 VEFAALQEALAHALTEKEGTDQE----LAKLRGQEAAQRTELKELQQTLEQLKI 1079



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 58/215 (26%), Gaps = 10/215 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            E    +  ++         +  +    + L    + L+    S EE+            
Sbjct: 668 TELEAQLKAEQQKTTEREKVVQEKAQLQEQLRALEESLKITKGSLEEEKRRAADALKEQQ 727

Query: 150 SKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLF 206
            +         S+    + +   +      R  LE +   L     +  + L   +    
Sbjct: 728 CRATEMEAESRSLMEQREREQKELEQEKAGRKGLEARIQQLEEAHQAETEALRHELAEAT 787

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY-----DEANLEFANYLKE 261
                ++++  +  R V            E+        E       ++   E      E
Sbjct: 788 ASQHRAESECERLIREVESRQKRFEARQQEEARYGAMFQEQLMALKGEKTGQEVQEEAVE 847

Query: 262 ISRDLE--QNQRTFADEMSKLTILEKTREQKTILS 294
           I  + +  Q Q   A   + L    +  ++K + +
Sbjct: 848 IHSEGQPGQQQSQLAQLHASLAKAIQQVQEKEVRA 882



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 70/214 (32%), Gaps = 7/214 (3%)

Query: 67   IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
            +K+  V    +  +    L    +ET             LR  + + +  ++      + 
Sbjct: 1247 LKRLVVAESEKSQKLEERLRLLQVETASNSARAAERSSALREEVQSLREEVEKQRVVSEN 1306

Query: 127  LEKAFESREEQLLDFLGKYHSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   S+ E+  +   +  +   K F     +S++          +  +   +   +  
Sbjct: 1307 SRQELASQAERAEELGQELKAWQEKFFQKEQALSALQLEHTSTQALVSELLPAKHLCQQL 1366

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             +   A     +++L   K         Q +L + +R +      LR+ I EQ+   + +
Sbjct: 1367 QAEQAAAEKRFREELEQSKQ-AAGGL--QAELMRAQREL-GELGSLRQKIVEQERAAQQL 1422

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                  +  E  + LK+    L +  R   +  +
Sbjct: 1423 RAEKA-SYAEQLSMLKKAHGLLAEENRGLGERAN 1455



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/215 (10%), Positives = 72/215 (33%), Gaps = 10/215 (4%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             G+++        F++        ++++ +             L   +    V ++  ++
Sbjct: 1509 EGAKVKVLEERQRFQEERQKLTAQVEQLEVFQREQTKQVMPGKLTEHDQASKVQQQKLKA 1568

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             + Q  +   +            ++ +   L  K        L     +      +    
Sbjct: 1569 FQAQRGESQQEVQR-----LQTQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQ 1623

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              Q+ L  ++ L ++N   +++  +  R + ++ L+ +    E +   RH+         
Sbjct: 1624 KLQEQLQDLEELQKENKELRSEAERLGRELQQAGLKTK----EAEQTCRHLTAQVRSLEA 1679

Query: 254  EFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            + A+  +++ RDL + Q       S+   ++   +
Sbjct: 1680 QVAHADQQL-RDLGKFQVATDALKSREPQVKPQLD 1713



 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 7/191 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSAL-DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
               +V +   R     E +A+          + +  +S   +L     KY     KV   
Sbjct: 1459 QFLEVELDQAREKYVQELAAVRTDAETHLAEMRQEAQSTSRELEVMTAKYEGAKVKVLEE 1518

Query: 156  GIS-SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   R           ++      +     L     + +     +K    +   SQ 
Sbjct: 1519 RQRFQEERQKLTAQVEQLEVFQREQTKQVMPGKLTEHDQASKVQQQKLKAFQAQRGESQQ 1578

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRT 272
            ++ + +  + +   +L +     ++    + +     +A  +    L+E  +DLE+ Q+ 
Sbjct: 1579 EVQRLQTQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQKLQEQLQDLEELQKE 1638

Query: 273  ---FADEMSKL 280
                  E  +L
Sbjct: 1639 NKELRSEAERL 1649


>gi|221068102|ref|ZP_03544207.1| HlyD family secretion protein [Comamonas testosteroni KF-1]
 gi|220713125|gb|EED68493.1| HlyD family secretion protein [Comamonas testosteroni KF-1]
          Length = 454

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 59/182 (32%), Gaps = 11/182 (6%)

Query: 216 LNQQERIVYKSTLELRENIH-EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           + + ER+      ++   +   Q+ +L    E    A L   +   +    L        
Sbjct: 242 VRKGERLFGLDEAQIGSRLEVAQQALLTAEAEYRQSAQLALGDARSK--AQLAVLVGRIG 299

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFS-SSNYAQQSQPLMKIVPHSKLTYIRAK 333
           ++ +++  L   RE+  +L+P  G ++++          Q  + +M+I        I A 
Sbjct: 300 EKRAEVQYLSDQRERSRVLAPEDGMVLFDSPTEWLGKPVQTGERVMRIA-RPDEVEIEAW 358

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           +       ++KG    +             +  +  +    S + +       Y V   +
Sbjct: 359 IPIGDAIPLEKGSMVKLYLAA---NPMAGLEGKLRYMAYDASARPD---GSYAYRVRATM 412

Query: 394 TD 395
             
Sbjct: 413 PP 414



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 57/137 (41%), Gaps = 7/137 (5%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           +  ++  +  I G+I L      +P+ +SV + GE++    V  +++P  G+I +  V+ 
Sbjct: 184 SWWQKKPVWIIGGLIALGA----VPVHMSVLAPGELVAAQPV-VLRAPLDGVIDQIHVQP 238

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L   ++ +    +++ + ++  L    +  +SA   L +     + A    
Sbjct: 239 NQVVRKGERLFGLDEAQIGSRLEVAQQAL--LTAEAEYRQSAQLALGDARSKAQLAVLVG 296

Query: 135 EEQLLDFLGKYHSTCSK 151
                    +Y S   +
Sbjct: 297 RIGEKRAEVQYLSDQRE 313


>gi|262395405|ref|YP_003287258.1| membrane-fusion protein [Vibrio sp. Ex25]
 gi|262338999|gb|ACY52793.1| membrane-fusion protein [Vibrio sp. Ex25]
          Length = 351

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 46/113 (40%), Gaps = 4/113 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G ++ E +  +I +  +  + +  V+ G ++ QG  L   E  +    +   + ++ + 
Sbjct: 64  PGVVVAEQHA-DIAARLTASVMEVLVKVGDRVKQGDVLARLESDDLDARVRQSEQALSSA 122

Query: 107 RCHIDT---EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  ++T   E S +  L NK  + +  F+  E  L      ++   + V    
Sbjct: 123 QAQLNTARKEFSRVRALLNKKLIPQSQFDQAESALQTAQANFNKAQAAVSEAE 175



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 75/226 (33%), Gaps = 15/226 (6%)

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAV----SQNDLNQQERIVYKSTLELRENIHEQ 237
           E  + +   L +S  + L  + +  ++  V      +DL+ + R   ++    +  ++  
Sbjct: 70  EQHADIAARLTASVMEVLVKVGDRVKQGDVLARLESDDLDARVRQSEQALSSAQAQLNTA 129

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +     +  L ++  +  + +  +    L+  Q  F    + ++  E T     I +P  
Sbjct: 130 RKEFSRVRALLNKKLIPQSQF-DQAESALQTAQANFNKAQAAVSEAETTFGYSIITAPFD 188

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I         + A     L+ +  +     I        + +V       V FP Y  
Sbjct: 189 GLITQKPIN-KGDTATPGALLLSMY-NPNSLEIEVNFAESVMPYVTYDKEVDVVFPSYNL 246

Query: 358 IREKKFKAIIEKIDP--------IISQQDNNLQTQEYYEVILKITD 395
             +   K +    D         +  +    +    Y +V L +TD
Sbjct: 247 NAQAAVKEVTPSADANSRSYTVKLQFEPLTAIYPGTYAKVALTLTD 292


>gi|88705198|ref|ZP_01102909.1| HlyD family secretion protein [Congregibacter litoralis KT71]
 gi|88700288|gb|EAQ97396.1| HlyD family secretion protein [Congregibacter litoralis KT71]
          Length = 365

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 71/246 (28%), Gaps = 34/246 (13%)

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQN-DLNQQERIVYKSTLELRENIH--------EQKNM 240
           A L+   +D   +  L    +V+    L +Q   V+    EL +           EQ  +
Sbjct: 43  AELAPIARDAESVGTLVGNESVAITAKLTEQVSAVHFEGGELVKAGAVLVELIDVEQLAL 102

Query: 241 LRHINELYDEANLEFANYLK-----EISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
           LR       E  L+   YL        + +++  +       + L  L    + +TI +P
Sbjct: 103 LREAEAKLRETQLQLDRYLTLGKDIATAAEIDVARARVDANAALLEALRSRIDDRTIRAP 162

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTATVRFP 353
             G I   +  S          + ++          +   +    +  +  G +      
Sbjct: 163 FDGVI-GLRRISVGALLTPGTVIAEL---DDINPMKLDFTLPEHYLSQISIGDSVNAVST 218

Query: 354 HYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
            +     + F   + +I   +            + V   I +         LR G    V
Sbjct: 219 AWD---GEVFAGQVTQIGSRVDPATRA------FSVRALIDNAEA-----RLRPGMLMAV 264

Query: 414 LFTAKN 419
             +   
Sbjct: 265 NVSLGE 270



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 48/149 (32%), Gaps = 3/149 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + L PI     S G ++  ++V          +     E G  +  G  L+   D+E   
Sbjct: 43  AELAPIARDAESVGTLVGNESVAITAKLTE-QVSAVHFEGGELVKAGAVLVELIDVEQLA 101

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFL--NNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           L+   +  ++  +  +D   +    +    + DV     ++    L     +      + 
Sbjct: 102 LLREAEAKLRETQLQLDRYLTLGKDIATAAEIDVARARVDANAALLEALRSRIDDRTIRA 161

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              G+  + R     L    ++     D+
Sbjct: 162 PFDGVIGLRRISVGALLTPGTVIAELDDI 190


>gi|306841524|ref|ZP_07474222.1| efflux transporter, RND family, MFP subunit [Brucella sp. BO2]
 gi|306288361|gb|EFM59720.1| efflux transporter, RND family, MFP subunit [Brucella sp. BO2]
          Length = 372

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 97  RIDDVEQRANMRVAQASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 157 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 216 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 263



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 58  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 110

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + S+      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 111 QASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 170

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 171 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 227

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 228 IGMGVTVALLADPSIEAEGNIRELS 252


>gi|292627881|ref|XP_002666777.1| PREDICTED: myosin-7-like [Danio rerio]
          Length = 1938

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 75/214 (35%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   LR  +D   S ++ +      LEK   + E+Q+ ++  KY
Sbjct: 1208 QIDNLQRVKQKLEKEKS--ELRLELDDVVSNMEQIAKAKANLEKMCRTLEDQMSEYRTKY 1265

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                + R L+ K + +  +   +     +   L+  L    
Sbjct: 1266 EEGQRSINDFTMKKAKLQTENGELSRQLEEKDSLVSQLTRGKQSYTQQIEDLKRQLEEEV 1325

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +        L +Q     ++  EL+ ++ +  + +      Y+   ++  
Sbjct: 1326 KAKNALAHAVQSARHDAELLREQYEEEQEAKAELQRSLSKANSEVAQWRTKYETDAIQRT 1385

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L++  + L Q  +   + +  +     + E+ 
Sbjct: 1386 EELEDAKKKLAQRLQDAEEAVEAVNAKCSSLEKT 1419



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/207 (11%), Positives = 64/207 (30%), Gaps = 6/207 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E  ++ +  + +       I+  K            LE+A    E        K+  + S
Sbjct: 1144 ELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATASTLRKKHADSVS 1203

Query: 151  KV------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +             + +        +  +  N   +    + L  +  + +  ++  + 
Sbjct: 1204 DLGEQIDNLQRVKQKLEKEKSELRLELDDVVSNMEQIAKAKANLEKMCRTLEDQMSEYRT 1263

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             +E+   S ND   ++  +     EL   + E+ +++  +         +  +  +++  
Sbjct: 1264 KYEEGQRSINDFTMKKAKLQTENGELSRQLEEKDSLVSQLTRGKQSYTQQIEDLKRQLEE 1323

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
            +++          S     E  REQ  
Sbjct: 1324 EVKAKNALAHAVQSARHDAELLREQYE 1350



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 74/203 (36%), Gaps = 5/203 (2%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  E  + ++ K  S++  +  +  E   L     + +    A + ++      L ++  
Sbjct: 1401 DAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKVLAEWKQ 1460

Query: 148  --TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                S+          RSL  +L ++++ Y   LD       ++    + Q+++  +   
Sbjct: 1461 KYEESQSELESSQKEARSLSTELFKLKNSYEESLD---HLESMKRENKNLQEEIADLTEQ 1517

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
              ++  + ++L +  + + +   E++  + E +  L H       A LEF     +I R 
Sbjct: 1518 IGESGKNIHELEKMRKQLEQEKAEIQTALEEAEGSLEHEEGKILRAQLEFNQVKADIERK 1577

Query: 266  LEQNQRTFADEMSKLTILEKTRE 288
            L +              +  T +
Sbjct: 1578 LAEKDEEMEQAKRNQQRMIDTLQ 1600



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 67/189 (35%), Gaps = 5/189 (2%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISS 159
              ++L   +   K++ +   +  + +++  ++ +E++ D   +   +   +         
Sbjct: 1475 EARSLSTELFKLKNSYEESLDHLESMKRENKNLQEEIADLTEQIGESGKNIHELEKMRKQ 1534

Query: 160  VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            + +      T +     +    E K   LRA L  +Q    + + L EK+   +     Q
Sbjct: 1535 LEQEKAEIQTALEEAEGSLEHEEGKI--LRAQLEFNQVKADIERKLAEKDEEMEQAKRNQ 1592

Query: 220  ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            +R++      L      +   LR   ++  + N E    L + +R   + Q+        
Sbjct: 1593 QRMIDTLQSSLESETRSRNEALRLKKKMEGDLN-EMEIQLSQANRQASEAQKQLKGLHGH 1651

Query: 280  LTILEKTRE 288
            L   +   +
Sbjct: 1652 LKDAQLQLD 1660



 Score = 40.0 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 68/217 (31%), Gaps = 20/217 (9%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            +        + +++     ++ E     ++ L+F   K D+  K  E  EE  ++   + 
Sbjct: 1534 QLEQEKAEIQTALEEAEGSLEHEEGKILRAQLEFNQVKADIERKLAEKDEE--MEQAKRN 1591

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                       + S  RS    L   + +  +  ++E + S      S  QK L  +   
Sbjct: 1592 QQRMIDTLQSSLESETRSRNEALRLKKKMEGDLNEMEIQLSQANRQASEAQKQLKGLHGH 1651

Query: 206  FEKNAVSQNDLNQ-----------QERIVYKSTLELRENIH--EQKNMLRHINELYDEAN 252
             +   +  +D  +            ER       EL E     EQ    R + E      
Sbjct: 1652 LKDAQLQLDDALRGNDDLKENIAIVERRNNLLQAELDELRSLVEQTERGRKLAEQELMDV 1711

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E    L   +  L   ++    + ++L    +   Q
Sbjct: 1712 SERVQLLHSQNTSLLNQKKKLEGDNTQLQTEVEEAVQ 1748


>gi|291407066|ref|XP_002719845.1| PREDICTED: citron isoform 3 [Oryctolagus cuniculus]
          Length = 2028

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 7/188 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ++    DL D  K S++NL    + E      + ++   +  A +S+   L   + + 
Sbjct: 728 VLDNQIKKDLAD--KESLENLMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVEL 785

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                   N  + +  R++K +   +  +   +  LE ++  L A     ++ L   + +
Sbjct: 786 SEANKLAANSSLFT-QRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQL---EKI 841

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             ++   +N L + E  + + +LE  E   E K  L  +     E   +    L+     
Sbjct: 842 SHQDHSDKNRLLELETRLREVSLEHEEQKLELKRQLTELQLSLQERESQLT-ALQAARAA 900

Query: 266 LEQNQRTF 273
           LE   R  
Sbjct: 901 LESQLRQA 908



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 3/207 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESREEQLLDFL 142
              +     D +  K+   +  R  +  EKS  +    +   +   EK   +R +Q +   
Sbjct: 1027 VMDLEALNDELLEKERQWEAWRSVLGDEKSQFECRVRELQRMLDTEKQSRARADQRITES 1086

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +      K     I ++ ++LK +  +  S+     DLE K ++L     S Q+ L   
Sbjct: 1087 RQVVELAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQKLETE 1146

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            + L ++    Q  L QQ  +       L + + E  +    +     +   +  N     
Sbjct: 1147 RELKQRLLEEQAKLQQQMDLQKNHIFRLTQGLQEALDRADLLKTERSDLEYQLENIQVLY 1206

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQ 289
            S +  + + T + +   +  L+   +Q
Sbjct: 1207 SHEKVKMEGTISQQTKLIDFLQAKMDQ 1233



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/247 (11%), Positives = 72/247 (29%), Gaps = 40/247 (16%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-----------LDFLNNKYDVLEKAFES 133
            L     E    +   + +   L   +   K+            +  L    D +++ F++
Sbjct: 880  LQLSLQERESQLTALQAARAALESQLRQAKTELEETTAEAEEEIQALTAHRDEIQRKFDA 939

Query: 134  REE------QLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                      L + L +     +++ N    +S            +  +      L  + 
Sbjct: 940  LRNSCTVITDLEEQLNQLTEDNAELNNQNFYLSKQLDEASGANDEIVQLRSEVDHLRREI 999

Query: 186  SLLRALLSSHQKDLTMMKN---LFEKNAVSQN----DLNQQERIVYK------------- 225
            +     L+S ++ +  +K    + E+  +       +L ++ER                 
Sbjct: 1000 TEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDELLEKERQWEAWRSVLGDEKSQFE 1059

Query: 226  -STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                EL+  +  +K      ++   E+       +KE   ++   Q+   ++  K   L 
Sbjct: 1060 CRVRELQRMLDTEKQSRARADQRITESRQVVELAVKEHKAEILALQQALKEQKLKAESLS 1119

Query: 285  KTREQKT 291
                   
Sbjct: 1120 DKLNDLE 1126


>gi|195347614|ref|XP_002040347.1| GM19135 [Drosophila sechellia]
 gi|194121775|gb|EDW43818.1| GM19135 [Drosophila sechellia]
          Length = 443

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 7/210 (3%)

Query: 86  TFEDIETTDLIDLKK-VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           T E +E     + ++  +I+ LR  +   +S            +K  E  EEQ      +
Sbjct: 58  TLELLEALATKNERENATIQELRDKVAQLESEKLEKAEFRRRFDKELELIEEQWRSETNE 117

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                S + +     V ++  ++ +  +S  L     E+  S+    L     D  +++ 
Sbjct: 118 LVDLVSSLQDENKRLVKQTQDLQSSSAQSSGLGASLTESIISMTNHELHGALSDTQVLQR 177

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------Y 258
           L E+    +++L  +ER +     EL     + + +     +      L  A        
Sbjct: 178 LKEQIYKQRDELKHRERELADKYSELEHLNIQAERLKASERDTRRRHKLMQAQVKTLCEE 237

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             +    L+   R       +L + EK  E
Sbjct: 238 RADFLAQLQDQNREINQLRKRLGLAEKENE 267


>gi|170730658|ref|YP_001776091.1| membrane fusion protein [Xylella fastidiosa M12]
 gi|167965451|gb|ACA12461.1| membrane fusion protein precursor [Xylella fastidiosa M12]
          Length = 411

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 43/135 (31%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            ++ G +    N V I    SG +       G  + +G  L   +        D    + 
Sbjct: 63  AAAPGTV-AAMNTVTINPQVSGQLISLHFREGESVKKGQLLAEIDARALQASYDQAAAAK 121

Query: 104 KNLRCHIDTEKS---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T ++       L  +  V +   +++  Q+  +     +  + +    +   
Sbjct: 122 RQNQALLATARANYTRSSTLEYQPYVAKTELDTQYNQVTQYEAAVAANEAAMRAAQVQLQ 181

Query: 161 YRSLKMKLTRMRSIY 175
           Y  +   +  +  I 
Sbjct: 182 YTKIVAPIDGVAGIR 196


>gi|82701822|ref|YP_411388.1| secretion protein HlyD [Nitrosospira multiformis ATCC 25196]
 gi|82409887|gb|ABB73996.1| Secretion protein HlyD [Nitrosospira multiformis ATCC 25196]
          Length = 411

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 71/193 (36%), Gaps = 14/193 (7%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---D 111
             VEI+   +GIIKK     G+ + +G  L   + +         K  +   +  +   +
Sbjct: 71  RPVEIRPQVTGIIKKVFFTEGTNVKKGNKLYLIDPVPFEAAYFSGKARVAQAQARLVQAE 130

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            E++ +  L  +  V  K+ +    + L       +  S +           +   +   
Sbjct: 131 QEEARVKPLLEEQAVSRKSVDDAIAETLAAKAGLEAAQSDLIRAKFDLDNTIITAPVNGR 190

Query: 172 --RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
             RS +     +  +++LL          +  +  ++    V ++ L ++ R + +  ++
Sbjct: 191 IGRSHFYEGRLVSAQTTLLTT--------IDQLDPMYVNVNVPESYLLRRRRELAEKKVQ 242

Query: 230 LRENIHEQKNMLR 242
            R +I + + ++ 
Sbjct: 243 -RPDIFQLRGVIT 254



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/111 (12%), Positives = 32/111 (28%), Gaps = 2/111 (1%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               + +  + + +     +  L +E  +   +    I+  L   +       S L   +
Sbjct: 117 ARVAQAQARLVQAEQEEARVKPLLEEQAVSRKSVDDAIAETLA-AKAGLEAAQSDLIRAK 175

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
              +   I +P+ G I     F           L+  +      Y+   V 
Sbjct: 176 FDLDNTIITAPVNGRI-GRSHFYEGRLVSAQTTLLTTIDQLDPMYVNVNVP 225


>gi|120553518|ref|YP_957869.1| RND family efflux transporter MFP subunit [Marinobacter aquaeolei
           VT8]
 gi|120323367|gb|ABM17682.1| efflux transporter, RND family, MFP subunit [Marinobacter aquaeolei
           VT8]
          Length = 417

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 81/263 (30%), Gaps = 34/263 (12%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-------VSQNDLNQQERIVYKSTLELR 231
           ++L  +++  R      Q    + + LFE+ A       + Q D N+      ++  EL 
Sbjct: 62  MELPGRTAAYRISEVRPQVTGILQERLFEQGAQVKAGEVLYQIDPNRYRAAHQRAQAELE 121

Query: 232 ENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               E +   R      D  E N        E    LE  +   +   + +         
Sbjct: 122 RAQAELRQAQREWARTSDLFEKNAVSKRQRDEALSALEAARADVSRSEAMVETAGIELAY 181

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQP-LMKIVPHSKLTYIRAKVTPKQIQHVK----- 343
             + +PIAG I     ++       +QP ++  V      Y+  ++  +++  ++     
Sbjct: 182 TEVKAPIAGRI-GPTLYTEGALVTANQPQVLARVVQLDPMYVDIQLPVEKLARIRSSLNE 240

Query: 344 -----KGY-TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
                 G   A               K  ++  D  ++Q  +++                
Sbjct: 241 GAASKPGLNEAETVLLRDDGTLYPH-KGRVDVADVTVNQSTSSVTV-----------RAV 288

Query: 398 FSDNNIELRNGFPAEVLFTAKNT 420
           F + + +L  G    V  +    
Sbjct: 289 FPNPDEDLLPGMYVRVRLSEGVR 311



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 66/188 (35%), Gaps = 15/188 (7%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E++   +GI+++   E G+Q+  G  L   +           +  ++  +  +   +   
Sbjct: 75  EVRPQVTGILQERLFEQGAQVKAGEVLYQIDPNRYRAAHQRAQAELERAQAELRQAQREW 134

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHS---TCSKVFNYGISSVYRSLKMKLTRMRS- 173
              ++ ++    +   R+E L            + + V   GI   Y  +K  +      
Sbjct: 135 ARTSDLFEKNAVSKRQRDEALSALEAARADVSRSEAMVETAGIELAYTEVKAPIAGRIGP 194

Query: 174 --------IYLNRLDLENKSSLLRALLSSHQ---KDLTMMKNLFEKNAVSQNDLNQQERI 222
                   +  N+  +  +   L  +    Q   + L  +++   + A S+  LN+ E +
Sbjct: 195 TLYTEGALVTANQPQVLARVVQLDPMYVDIQLPVEKLARIRSSLNEGAASKPGLNEAETV 254

Query: 223 VYKSTLEL 230
           + +    L
Sbjct: 255 LLRDDGTL 262


>gi|301781841|ref|XP_002926342.1| PREDICTED: RIMS-binding protein 3A-like [Ailuropoda melanoleuca]
          Length = 2187

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 68/187 (36%), Gaps = 14/187 (7%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTE----KSALDFLNNKYDVLEKAFESREEQLLD-FLG 143
              +  +++ ++  ++ LR  ++TE    ++      ++   L +A E   +QL+D    
Sbjct: 22  PSPSAAVLEEQRRELEKLRAELETERARGRAERQRFASQARQLREAAERERQQLVDHLRS 81

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTR-MRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
           K+ +   +        V R  + ++ + +R        L       R  +    ++L   
Sbjct: 82  KWEAQRGRELRQLQEDVLREREAEIRQLLRWKEAEMRQLRQLLHRERDGVMRQARELQRQ 141

Query: 203 --KNLFEKNA-----VSQNDLNQQERIVYKSTLELR-ENIHEQKNMLRHINELYDEANLE 254
             + L  +         +    Q    + +   +LR E   EQ + +RH+    D     
Sbjct: 142 LAEELVNRGYCGRAGAPEVAAAQCHCRLQEVLAQLRWETDGEQASRIRHLQAELDVERQL 201

Query: 255 FANYLKE 261
           F  Y+ E
Sbjct: 202 FLKYILE 208



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 44/126 (34%), Gaps = 2/126 (1%)

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKN 204
            S  + V       + +      T        R    +++  LR      ++ L   +++
Sbjct: 22  PSPSAAVLEEQRRELEKLRAELETERARGRAERQRFASQARQLREAAERERQQLVDHLRS 81

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
            +E     +     QE ++ +   E+R+ +  ++  +R + +L            +E+ R
Sbjct: 82  KWEAQRGRELRQL-QEDVLREREAEIRQLLRWKEAEMRQLRQLLHRERDGVMRQARELQR 140

Query: 265 DLEQNQ 270
            L +  
Sbjct: 141 QLAEEL 146


>gi|297690385|ref|XP_002822600.1| PREDICTED: pleckstrin homology-like domain family B member 1-like
           isoform 1 [Pongo abelii]
          Length = 1409

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 79/229 (34%), Gaps = 24/229 (10%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G +++ +V     + +    L     E      L +   +  R  +  E+ A+D L  K 
Sbjct: 725 GRMEQLKVR----VKELEQQLQESAREAEMERALLQGEREAERALLQKEQKAVDQLQEKL 780

Query: 125 DVLEKAFE-SREEQLLDFLGKYHSTCSKV-----FNYGISSVYRSLKMKLTRMRSIYLNR 178
             LE   +  R+++  +         ++          + +   S++ +L          
Sbjct: 781 VALETGIQKERDKERAELAAGRRHLEARQALYAELQTQLDNCPESVREQLQEQLRREAEA 840

Query: 179 LDLENKS-SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           L+ E K    L       +  +   + L  +  +             +S  EL  +I ++
Sbjct: 841 LETETKLFEDLEFQQLERESRVEEERELAGQGLL-------------RSKAELLRSIAKR 887

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
           K  L  ++    +   +     + ++RD   + +    E  KLT+LE+ 
Sbjct: 888 KERLAILDSQAGQIRAQAVQESERLARDKNASLQLLQKEKEKLTVLERR 936



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 56/192 (29%), Gaps = 19/192 (9%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +S+ +       + E    S EE L +      ST  +  +   + +   +         
Sbjct: 663 RSSEEPGVATQRLWESMERSDEENLKEECSSTESTQQEHEDAPSTKLQGEVLALEEERAQ 722

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-------------EKNAVSQND--LNQ 218
           +      L+ +   L   L    ++  M + L              E+ AV Q    L  
Sbjct: 723 VLGRMEQLKVRVKELEQQLQESAREAEMERALLQGEREAERALLQKEQKAVDQLQEKLVA 782

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN----YLKEISRDLEQNQRTFA 274
            E  + K   + R  +   +  L     LY E   +  N      +++   L +      
Sbjct: 783 LETGIQKERDKERAELAAGRRHLEARQALYAELQTQLDNCPESVREQLQEQLRREAEALE 842

Query: 275 DEMSKLTILEKT 286
            E      LE  
Sbjct: 843 TETKLFEDLEFQ 854


>gi|289582094|ref|YP_003480560.1| SMC domain protein [Natrialba magadii ATCC 43099]
 gi|289531647|gb|ADD05998.1| SMC domain protein [Natrialba magadii ATCC 43099]
          Length = 924

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 80/226 (35%), Gaps = 18/226 (7%)

Query: 78  ILQGTP--LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
           + QG    L+     E  D+ID            +   +   +  ++    ++   + + 
Sbjct: 136 VRQGEVNKLIHASPSERQDMIDDL--------LQLGALEEYRERASDARLGVKSVLDGQR 187

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E L D   +      +  +  ++++ +       ++      R          + +L  H
Sbjct: 188 EVLDDVRSQVEQKEEQDLHETLNTLEKERDELTEQIDHYEAQRDQAVETLETAQEVLERH 247

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           ++    ++ L E+    Q+ + + ER    +  E+RE    ++ +    NEL  +   E 
Sbjct: 248 EETREEIETLGEEIDDLQSKITETERDREDAKDEIRERKEAREELADERNELLADLEREV 307

Query: 256 --------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                      +++   DLE+      D+++ + +  +T+ +    
Sbjct: 308 DPGADSGAETSVEQHIDDLEERDEELQDDLADVRVSIQTKTETADR 353



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 66/197 (33%), Gaps = 4/197 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
              D  D  +  +   R  I   +     L  + D LE   E++ E+  +   +      
Sbjct: 546 RLADNRDNVEQLLAQKRETIADRREQCTELREEADELESDAEAKREEASELESEVDEVRV 605

Query: 151 KVFN-YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           ++    G  S  +     L R+R I   R +LE +    R   +  Q+   M +   E  
Sbjct: 606 ELGKINGERSAIKETLQALRRLREIADERAELERQIVTRRERRADWQE---MNEERRETL 662

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +  ++   + E     + +E      +  +      E   +   E  + ++     +E+ 
Sbjct: 663 SAKRDRKRELEDEFDDARVEAAREDRQNADTYIEQVEEKLDDLEEQRDDVQGTIGGVEEK 722

Query: 270 QRTFADEMSKLTILEKT 286
                    +L  +E+T
Sbjct: 723 LDELERLRDRLVAVEET 739



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 67/215 (31%), Gaps = 14/215 (6%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             +D+ +       +  +      ++ E+  L    + Y+          E   + L ++
Sbjct: 189 VLDDVRSQVEQKE-EQDLHETLNTLEKERDELTEQIDHYEAQRDQAVETLETAQEVLERH 247

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             T  ++   G   +           R     + ++  +      L     + L  ++  
Sbjct: 248 EETREEIETLG-EEIDDLQSKITETERDREDAKDEIRERKEAREELADERNELLADLERE 306

Query: 206 FEKNAVS---------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +  A S          +DL +++  +     ++R +I  +      + E  D+      
Sbjct: 307 VDPGADSGAETSVEQHIDDLEERDEELQDDLADVRVSIQTKTETADRLREEADDLETRAD 366

Query: 257 NYLK---EISRDLEQNQRTFADEMSKLTILEKTRE 288
                  EI  +LE  +    D   KL+ LE   +
Sbjct: 367 EARTDADEIESELETTESEIGDREEKLSELEDEID 401



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 76/233 (32%), Gaps = 24/233 (10%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           ++       +   ++  R  +  E  ALD    + + L++A E R E+L D         
Sbjct: 500 VDVLAEKREEAEELEAERETLAAEIEALDERIEQVEDLQEA-ERRVERLADNRDNVEQLL 558

Query: 150 SKV------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           ++            + +        +   +      +LE++   +R  L     + + +K
Sbjct: 559 AQKRETIADRREQCTELREEADELESDAEAKREEASELESEVDEVRVELGKINGERSAIK 618

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENI---HEQKNMLRHINELYDEANLEFANYLK 260
              +          ++ R +     EL   I    E++   + +NE   E      +  +
Sbjct: 619 ETLQA--------LRRLREIADERAELERQIVTRRERRADWQEMNEERRETLSAKRDRKR 670

Query: 261 EISRDLEQNQRTFA--DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           E+  + +  +   A  D  +  T +E+  E+   L      +      +    
Sbjct: 671 ELEDEFDDARVEAAREDRQNADTYIEQVEEKLDDLEEQRDDVQG----TIGGV 719



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 61/177 (34%), Gaps = 4/177 (2%)

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++  G        I+ T     +   I + R  ++ +   +     +    ++  E R E
Sbjct: 604 RVELGKINGERSAIKETLQALRRLREIADERAELERQ---IVTRRERRADWQEMNEERRE 660

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            L     +      +  +  + +     +   T +  +     DLE +   ++  +   +
Sbjct: 661 TLSAKRDRKRELEDEFDDARVEAAREDRQNADTYIEQVEEKLDDLEEQRDDVQGTIGGVE 720

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + L  ++ L ++  V+  +  +    +Y     L+    E ++ LR  N    E  L
Sbjct: 721 EKLDELERLRDR-LVAVEETCETLESLYDEAETLQTTYGELRSDLRQQNVETLERLL 776


>gi|300798161|ref|NP_001178288.1| liprin-alpha-4 [Bos taurus]
 gi|297483836|ref|XP_002693895.1| PREDICTED: liprin-alpha-4-like [Bos taurus]
 gi|296479439|gb|DAA21554.1| liprin-alpha-4-like [Bos taurus]
          Length = 1195

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 82/237 (34%), Gaps = 18/237 (7%)

Query: 72  VENGSQILQGTP------LLTFEDIETTDLIDLKKVS---IKNLRCHIDTEKSALDFLNN 122
           V +G    +GT       L   +  +  +L +L +     +   R  + T  + +  L  
Sbjct: 202 VRDGVAEEEGTVELGPKGLWKEDAGQVEELQELLEKQNFELSQARERLVTLTATVAELEE 261

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLKMKLTRMRSIYLNRLD 180
                 +     EE             ++       I+++ +          SI+     
Sbjct: 262 DLGTARRDLIKSEELSSKHQRDLREALAQKEDMEERITTLEKRYLAAQREATSIHDLNDK 321

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
           LEN+ +   +L    ++    ++ L E   V++  L Q  R   ++  E+   + ++   
Sbjct: 322 LENELANRESLHRQCEEKARYLQELLE---VAEQKLQQTMRK-AETLPEVEAELAQRVAA 377

Query: 241 LRHINEL---YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
           L    E     +E   +    L+E +++L + ++      +    L  T ++  I +
Sbjct: 378 LTKAEERHGNTEEHLRQLEGQLEEKNQELARVRQRERMNEAHNKRLSDTVDRLLIEA 434


>gi|163855509|ref|YP_001629807.1| HlyD family secretion protein [Bordetella petrii DSM 12804]
 gi|163259237|emb|CAP41537.1| HlyD family secretion protein [Bordetella petrii]
          Length = 301

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/222 (11%), Positives = 62/222 (27%), Gaps = 24/222 (10%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           +    + ++   +     +     R        A++     L       E  +  +   +
Sbjct: 84  RLANDLAEAKASVATAKAQLAAAEREDKRYRGLADVVAPQELDVRRTAAETARAQYEQAI 143

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + L       E+  + SP+ G I          YA   QP+M +V      Y+       
Sbjct: 144 ASLDRARINLERAEVRSPVNGIITNFSLL-PGAYAIAGQPVMALV-DQDSFYVAGYFEET 201

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKA---------IIEKIDPIISQQDNN---LQTQE 385
           ++  +  G  AT+     +   +   +           +     +++  +     ++  +
Sbjct: 202 KLSRMGVGMPATIHLMGESRSLKGHVEGFAAGIEDRERVTSTGTLLANVNPTFSWVRLAQ 261

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV-------LFTAKNT 420
              V + I ++        L  G  A V              
Sbjct: 262 RIPVRIAIDEV---PKGATLIAGRTATVVVDDSVPFLPTAER 300



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 12/109 (11%), Positives = 36/109 (33%), Gaps = 1/109 (0%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + + +V +   +  G  L   + +   + +   K S+   +  +   +         
Sbjct: 57  SGRVDEVRVRDNQVVKHGDVLFVIDRVRLANDLAEAKASVATAKAQLAAAEREDKRYRGL 116

Query: 124 YDVLE-KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            DV+  +  + R         +Y    + +    I+     ++  +  +
Sbjct: 117 ADVVAPQELDVRRTAAETARAQYEQAIASLDRARINLERAEVRSPVNGI 165


>gi|145494965|ref|XP_001433476.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400594|emb|CAK66079.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1547

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 75/197 (38%), Gaps = 6/197 (3%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            D +    I   + ++K     I   +  L  L+++   L++   ++ E+L +   +   
Sbjct: 263 HDEQFKIRITKLEETLKEKETQIQQLQKKLQRLDSENAFLQQEMRNKTEKLEEEQRRSKQ 322

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             +++ +  ++ V       + + + I     ++E +    + L  ++   L    NL E
Sbjct: 323 LHAELLDTRVNKVQNLQDEIVKQKKVIQQRVEEIEEQEKKNKLLNVNYCSLLQNKLNLLE 382

Query: 208 KNA-----VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
                   V++ +  + E+   K   EL +   + K  L  +     + +L      +E+
Sbjct: 383 TQLKNFDDVARQEKEELEKGWQKKYKELEKQSVQYKRDLNQLEIQLQQVDLLVQQKEQEV 442

Query: 263 SRDLEQNQRTFADEMSK 279
            + + +  +  +D   +
Sbjct: 443 EQAVVKV-KELSDLNER 458



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 74/207 (35%), Gaps = 13/207 (6%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK--- 151
            ++ + V  K     ++ +   +D L  + +   +    + ++L D   +   T      
Sbjct: 409 ELEKQSVQYKRDLNQLEIQLQQVDLLVQQKEQEVEQAVVKVKELSDLNERQLQTLQANSI 468

Query: 152 ---VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS-SHQKDLTMMKNL-- 205
                N  +    + L+    +   I   R  L ++       +S   Q+   M K L  
Sbjct: 469 EILRLNQEVQEKDQDLEYAEQQNEEISKERTTLMDRIGEQNNEISDLKQQAFQMKKELEG 528

Query: 206 --FEKNAVSQ--NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             +EK    +    LN+Q     +S+ + R+ + E+      +    ++   +  +   +
Sbjct: 529 MKWEKQDSDRKLERLNEQIAQANQSSDQFRQQLDEEIKKTYSLYSEINKLKQDIEDLKVQ 588

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTRE 288
             ++++Q Q+    +  ++  L    +
Sbjct: 589 HQKEMQQQQKVIDGKDEEIKKLHDKLQ 615


>gi|120435075|ref|YP_860761.1| HlyD family secretion protein [Gramella forsetii KT0803]
 gi|117577225|emb|CAL65694.1| HlyD family secretion protein [Gramella forsetii KT0803]
          Length = 416

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 77/212 (36%), Gaps = 19/212 (8%)

Query: 44  VSSSGEILNEDNVVEI--KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           +  +G +L    +  I   +   G +++  VE+G+ + +G P++   + +    +  ++ 
Sbjct: 62  IPVNGVVLP---IKTIYLDAMEGGRVEEKFVEDGTMMKKGEPIIRLSNTDLELSLVNQET 118

Query: 102 SIKNLRCHID-----TEKSALDFLNNKYDVLEKAFESREE-QLLDFLGKYHSTCSKVFNY 155
            + NL   +        ++ ++  NN  DV     E+R + +L   L +  +   + +  
Sbjct: 119 QVYNLLTQMQISQNAARQNTINKRNNFTDVENNLIEARRKYELNKKLYEKGAVGRQDYME 178

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             ++     +        +  + L  + ++   R      +K L +M+         +  
Sbjct: 179 SENNYNYQQEKHQLAREVLEQDSLSSKQETQQARESYERTRKALELMRR--------KVG 230

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
               +  V      L   I + K     + ++
Sbjct: 231 DLVVKAPVDGQLTALDAEIGQSKQKGERLGQI 262



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 26/195 (13%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
              + VY  L        +   N ++  N  + +   L   ++   + K L+EK AV + 
Sbjct: 115 NQETQVYNLLTQMQISQNAARQNTINKRNNFTDVENNLIEARRKYELNKKLYEKGAVGRQ 174

Query: 215 DLNQQER--IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           D  + E      +   +L   + EQ ++         +   +     +   + LE  +R 
Sbjct: 175 DYMESENNYNYQQEKHQLAREVLEQDSLSSK------QETQQARESYERTRKALELMRRK 228

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI-VPHSKLTYIR 331
             D                + +P+ G +    +       Q+ + L +I V       +R
Sbjct: 229 VGDL--------------VVKAPVDGQLTALDA-EIGQSKQKGERLGQIDVISGYK--VR 271

Query: 332 AKVTPKQIQHVKKGY 346
           A++    I  +  G 
Sbjct: 272 AEIDEHYISRIFNGQ 286


>gi|45384404|ref|NP_990273.1| CAP-Gly domain-containing linker protein 1 [Gallus gallus]
 gi|3024541|sp|O42184|CLIP1_CHICK RecName: Full=CAP-Gly domain-containing linker protein 1; AltName:
            Full=Cytoplasmic linker protein 170; Short=CLIP-170;
            AltName: Full=Restin
 gi|2338714|gb|AAC60344.1| restin [Gallus gallus]
          Length = 1433

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 74/200 (37%), Gaps = 6/200 (3%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            T  +  K+  + +L  ++       D L  +  +L++ F S  +   +       T +K+
Sbjct: 806  TKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKL 865

Query: 153  FNYG-----ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                     +SS    LK  LT M +    R + E + +  +  L +   ++        
Sbjct: 866  NQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSS 925

Query: 208  KNAVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
               +  ND  +  ER + +  LEL +   +   + +++ +   +A       LK    +L
Sbjct: 926  AQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEEL 985

Query: 267  EQNQRTFADEMSKLTILEKT 286
            ++ Q    D   ++   +  
Sbjct: 986  KKMQDQLTDMKKQMETSQNQ 1005



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 68/211 (32%), Gaps = 8/211 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           T      K  ++ ++   + E S L     K +  +       E L   L +      + 
Sbjct: 643 TAEFAELKTQMEKVKLDYENEMSNLKL---KQENEKSQHLKEIEALKAKLLEVTEEKEQT 699

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                + +       L  M        + E K   L  L +   +   ++ +L ++   S
Sbjct: 700 LENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRAS 759

Query: 213 QNDLNQQ---ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +  L      ++   +  LE+++   + +   + I  L  E        L+   + L   
Sbjct: 760 EEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLDL 819

Query: 270 QRTFADEMSKLTILEKTRE--QKTILSPIAG 298
           ++  +        LEK  +  ++   S + G
Sbjct: 820 EKNLSAVNQVKDSLEKELQLLKEKFTSAVDG 850



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 68/209 (32%), Gaps = 11/209 (5%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF----ESREEQLLDFLGKY 145
               + +  K+  I+ L    D E++ +    +    +E+      +  +  +L+   K 
Sbjct: 352 TALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKM 411

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               + V       V   L       R +   +  +E +S     L +  + +   +K L
Sbjct: 412 DQLRAMVEAADREKV-ELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKEL 470

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA-----NLEFANYLK 260
            +     +   ++ +R +  + +           + R +     E       LE + ++ 
Sbjct: 471 EQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSKHID 530

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQ 289
           ++   L    +  +    K+    K  ++
Sbjct: 531 DVDTSLS-LLQEISSLQEKMAAAGKEHQR 558


>gi|320183713|gb|EFW58551.1| putative RND efflux membrane fusion protein [Shigella flexneri CDC
           796-83]
          Length = 415

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I+   N V ++S   G +     + G Q+  G  L   +  
Sbjct: 64  AATA-VEQAVPRYLTGLGTIIAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 121

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 122 QFKVALAQTQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 177

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 178 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 210



 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 122 QFKVALAQTQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 181

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 182 DEASVASAQLQLD 194


>gi|218555805|ref|YP_002388718.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli IAI1]
 gi|226706820|sp|B7M0V3|AAEA_ECO8A RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|218362573|emb|CAR00197.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           IAI1]
          Length = 310

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 60/171 (35%), Gaps = 14/171 (8%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLEFANYLKEISRDLEQNQR 271
           Q  L + +  V    +  +E   E     R  +  +  E   +  N L+ +   L + Q 
Sbjct: 84  QKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQANNVLQTVLHQLAKAQA 143

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           T         + +   E+  I +P  G +     ++   +  +    + +V  +   Y+ 
Sbjct: 144 TR-------DLAKLDLERTVIRAPADGWVTNLNVYT-GEFITRGSTAVALVKQNS-FYVL 194

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           A +   +++ V+ GY A +          K  K  ++ +   ++   +   
Sbjct: 195 AYMEETKLEGVRPGYRAEIT----PLGSNKVLKGTVDSVAAGVTNASSTRD 241



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    +   + L+ +  I     W            + +     +VV I    SG+
Sbjct: 2   KTLIRKFSRTAITVVLVILAFIAIFNAWVYYTE----SPWTRDARFSADVVAIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V +   + +G  L T +       ++  +  +   +  +  EK       N+  V
Sbjct: 58  ITQVNVHDNQLVKKGQILFTIDQPRYQKALEEAQADVAYYQV-LAQEKRQEAGRRNRLGV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVLHQLAKAQATRDLAKL 150


>gi|220934649|ref|YP_002513548.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995959|gb|ACL72561.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 396

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/227 (11%), Positives = 72/227 (31%), Gaps = 14/227 (6%)

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                    G +     + + L    S  L+   L+   + L A  ++ +     ++ L 
Sbjct: 64  QARRIHLQVGDAVRLDDVLVTLDAPASPALDARTLQEARARLAAAEAALETARAEVRALA 123

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            +   ++ +  + + +  +  +         ++ L       D+A     +    +   +
Sbjct: 124 AQALFAREEFERLKGLAEQQLIS--------RSALDRAATELDQAEALTRSARFRVQTAI 175

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            Q     A                 + SP+ G ++  + F S+   Q  +P+++I     
Sbjct: 176 AQRDAAQAVLAHSNGQDPDAFAVLELRSPVNGLVLR-RHFESARVVQPGEPILEIG-DPG 233

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
              +   V       ++ G    V F  +     +  +  + +++P 
Sbjct: 234 RLEVAVDVLSADAVRIEPGM--RVIFERWG--ETRALEGRVRRVEPT 276


>gi|209549848|ref|YP_002281765.1| secretion protein HlyD [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535604|gb|ACI55539.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 408

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 68/206 (33%), Gaps = 28/206 (13%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           E    +S+    E +  +  M     E    A  +  N   +  +D+E+ +        +
Sbjct: 201 ELAQARSSFARSERLAGRDAMSAQALEEARTAVDKAENAALQARQDVEKAELEIDKAREQ 260

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNY------AQQSQPLMKIVPHSKLTYIRAK 333
           +  L        + +PI+GT+    +             ++ + L+ I   +    I A 
Sbjct: 261 VEAL-------IVRAPISGTVTRLDAHVGDTVLSREDSVREDESLLTIT-DTASLVIDAD 312

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           V    I  ++ G +       +     + F   + KI P++S++           V L++
Sbjct: 313 VAEANIALMRPGLSGEAVLDGFP---GQPFAIAVSKIAPVVSREKGT--------VTLRL 361

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN 419
           +  +       +R    A +      
Sbjct: 362 SLTSPPPG---MRPAMAARIRLLVGE 384



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 56/166 (33%), Gaps = 13/166 (7%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +   V+ SG ++  D           I+   +VE G  ++ G  L+  +D      + 
Sbjct: 124 AALPREVTGSGYVVAPDIATVFSKYEGRIVA-VEVEAGDSVVAGQVLVRLDDAGARFALR 182

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +++ +     ++     L    + +   E+            L    +  ++      
Sbjct: 183 GAEIAGRAAALALEARTIELAQARSSFARSER------------LAGRDAMSAQALEEAR 230

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           ++V ++    L   + +    L+++     + AL+       T+ +
Sbjct: 231 TAVDKAENAALQARQDVEKAELEIDKAREQVEALIVRAPISGTVTR 276


>gi|116062147|dbj|BAF34704.1| fast skeletal myosin heavy chain isoform mMYH-7 [Oryzias latipes]
          Length = 1936

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 84/211 (39%), Gaps = 12/211 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            E+ + ++ K  S++  +  +  E   L    +  N+    L+K   + ++ L ++  KY 
Sbjct: 1404 ESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYE 1463

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             + +++   G     RSL  +L +M++ Y   LD   +   ++    + Q++++ +    
Sbjct: 1464 ESQAEL--EGAQKEARSLSTELFKMKNSYEEALD---QLETMKRENKNLQQEISDLTEQI 1518

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             +   S ++L + ++ V     E++  + E +  L H         LE      EI R L
Sbjct: 1519 GETGKSIHELEKAKKTVETEKSEIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKL 1578

Query: 267  EQNQRTFADEM---SKLTILEKTREQKTILS 294
             +             ++    ++     + S
Sbjct: 1579 AEKDEEMEQIKRNSQRVIESMQSTLDAEVRS 1609



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 76/234 (32%), Gaps = 23/234 (9%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1208 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEGVAKSKGNLEKMCRTLEDQLSELKAKN 1265

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +     ++ +        T          + E   S L     +  + +  +K L
Sbjct: 1266 DENVRQ-----LNDLNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQIEELKRL 1320

Query: 206  FEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
             E+   ++N L               +Q     ++  EL+  + +  + +      Y+  
Sbjct: 1321 VEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETD 1380

Query: 252  NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
             ++    L+E  + L Q  +   + +  +     + E+      + G +     
Sbjct: 1381 AIQRTEELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQR--LQGEVEDLMI 1432



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K   I  L   I+ E+S    L  K   L+   
Sbjct: 1058 EGDLKLAQESIMDLENDKQQSDEKIKKKDFEISQLLSKIEDEQSLGAQLQKKIKELQARI 1117

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1118 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1171

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1172 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1226

Query: 252  NLEFANYLKEIS------RDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +    +        +LE+  RT  D++S+L        ++
Sbjct: 1227 KMEIDDLSSNMEGVAKSKGNLEKMCRTLEDQLSELKAKNDENVRQ 1271



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 72/227 (31%), Gaps = 8/227 (3%)

Query: 72   VENGSQILQGTP--LLTFEDIETTDLIDLKKVSIKNLRCHID--TEKSALDFLNNKYDVL 127
            V     +       LL  ++    +     +  +  ++  +D   +++       K  + 
Sbjct: 1703 VAEQELVDASERVGLLHSQNTSLLNTKKKLESDLVQVQGEVDDAIQEARNAEEKAKKAIT 1762

Query: 128  EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRLDLENKSS 186
            + A  S E +       +     K     +  +   L       M+        LE++  
Sbjct: 1763 DAAMMSEELKKEQDTSSHLERMKKNLEVTVKDLQHRLDEAENLAMKGGKKQLQKLESRVR 1822

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L + + S Q+          K      +L  Q     K+   L++ + + +  ++    
Sbjct: 1823 ELESEVESEQRRGADAIKGVRKYERRVKELTYQTEEDKKNVARLQDLVDKLQLKVKAYKR 1882

Query: 247  LYDEANLEFA---NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +EA  +     + L+++  +LE+ Q       S++  L       
Sbjct: 1883 QAEEAEEQANTHMSKLRKVQHELEEAQERADIAESQVNKLRVKSRDT 1929


>gi|167645913|ref|YP_001683576.1| secretion protein HlyD family protein [Caulobacter sp. K31]
 gi|167348343|gb|ABZ71078.1| secretion protein HlyD family protein [Caulobacter sp. K31]
          Length = 356

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/191 (10%), Positives = 62/191 (32%), Gaps = 7/191 (3%)

Query: 31  LITWSILLPI---EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
            + W +L P    E  VS +G I   +  +++ +   G ++   V+ G+ +  G  +   
Sbjct: 23  FLGWGLLRPPALPEGVVSGNGRIEAVE--IDVAAKTPGRVRDILVDEGAYVKAGQIVAHM 80

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +           +   +     I+   S +    ++          R+ +L     +   
Sbjct: 81  DTDVLQAQRAEAEAQHQQALNAIEIANSQVIQRQSERAAAFAGTRQRQAELDA--ARRRL 138

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             S       ++  +       R+ S          + + + A +++ +  +   ++  +
Sbjct: 139 ARSDTLAREGATAMQERDDDQARVESAQAAIEASRAQMAAVDAAIATARSQVIGARSNVD 198

Query: 208 KNAVSQNDLNQ 218
               +   L+ 
Sbjct: 199 AVLAALRRLDA 209


>gi|67971746|dbj|BAE02215.1| unnamed protein product [Macaca fascicularis]
          Length = 768

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 65/192 (33%), Gaps = 5/192 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           LI+     I  L+  ++  K+    +  +        E+   +      +    C +   
Sbjct: 107 LIERLYREISGLKAQLENMKTESQRVVLQLKGRVSELEAELAEQQHLRQQAADDC-EFLR 165

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             +  + R  +      RS+       +        L   + + +    +L  KNA    
Sbjct: 166 AELDELRRQREDTEKAQRSLSEIERKAQAYEQRYSKLKEKYSELVQNHADLLRKNA---- 221

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ +Q  +  ++ ++L     + ++ L  I++       E    L+ + ++L  +QR   
Sbjct: 222 EVTKQVSVARQAQVDLEREKKQLEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQ 281

Query: 275 DEMSKLTILEKT 286
                L    ++
Sbjct: 282 VLQGSLETSAQS 293



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 74/211 (35%), Gaps = 18/211 (8%)

Query: 91  ETTDLIDLKKVSIKNLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +  D  +  +  +  LR    DTEK+      ++ +   +A+E R  +L +   +     
Sbjct: 156 QAADDCEFLRAELDELRRQREDTEKAQRSL--SEIERKAQAYEQRYSKLKEKYSELVQNH 213

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL-RALLSSHQKDLTMMKNLFEK 208
           + +     + V + + +       +   +  LE+    +        Q+ L ++++L   
Sbjct: 214 ADLLRKN-AEVTKQVSVARQAQVDLEREKKQLEDSLERISDQGQRKTQEQLEVLESL--- 269

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA------NLEFANYLKEI 262
               + +L   +R +      L  +   + N    I EL  E              L  +
Sbjct: 270 ----KQELATSQRELQVLQGSLETSAQSEANWAAQIAELEKERDSLVSGAAHRDEELSAL 325

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            R+L+  Q   A     +  L K + +  ++
Sbjct: 326 RRELQDTQLKLASTEESMCQLAKDQRKMLLV 356


>gi|21241101|ref|NP_640683.1| acriflavin resistance protein [Xanthomonas axonopodis pv. citri
           str. 306]
 gi|21106400|gb|AAM35219.1| acriflavin resistance protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 408

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 67/210 (31%), Gaps = 10/210 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           ++    GI++K     G  +  G  L   +        D  K  +      + + +    
Sbjct: 70  VRPQVGGIVRKRLFTEGQDVQAGQVLYEIDPASYQAAYDTAKGDLAQAEAAVLSARPKA- 128

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               +Y  L       ++   D L    S  + V     S     + +  TR+ +    R
Sbjct: 129 ---QRYQTLVGLDAVSKQDGDDALATLRSNEAAVVAAKASLQTARINLDYTRITAPVSGR 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV----SQNDLNQQERIVYKSTLELRENI 234
           +   + +S   AL+S+ Q ++    N  +   V    S   L Q  R +    L+  +  
Sbjct: 186 IGTSSYTSG--ALVSAGQSEVLATINQLDPIYVDVTQSSAQLLQLRRQLDAGQLKAVDGK 243

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISR 264
            E    L   +       LE  +   + + 
Sbjct: 244 AEVTLQLEDGSTYAHSGTLEVVDAAVDTAT 273



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 21/208 (10%), Positives = 54/208 (25%), Gaps = 28/208 (13%)

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEM 277
           +     +  +L +      +             L+  +     +    L  N+       
Sbjct: 104 QAAYDTAKGDLAQAEAAVLSARPKAQRYQTLVGLDAVSKQDGDDALATLRSNEAAVVAAK 163

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVPHSKLTYIR----- 331
           + L       +   I +P++G I    S++S       Q  ++  +      Y+      
Sbjct: 164 ASLQTARINLDYTRITAPVSGRI-GTSSYTSGALVSAGQSEVLATINQLDPIYVDVTQSS 222

Query: 332 AKVTPKQIQHVKKGY------TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           A++  +  + +  G        A V                +E +D  +      +    
Sbjct: 223 AQLL-QLRRQLDAGQLKAVDGKAEVTLQLEDGSTY-AHSGTLEVVDAAVDTATGTV---- 276

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEV 413
             ++   + +         L  G     
Sbjct: 277 --KLRAVVPNPERL-----LLPGMYVTA 297


>gi|66803542|ref|XP_635612.1| hypothetical protein DDB_G0290503 [Dictyostelium discoideum AX4]
 gi|74896865|sp|Q54G05|LRRX1_DICDI RecName: Full=Putative leucine-rich repeat-containing protein
           DDB_G0290503
 gi|60463949|gb|EAL62112.1| hypothetical protein DDB_G0290503 [Dictyostelium discoideum AX4]
          Length = 1492

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 82/208 (39%), Gaps = 11/208 (5%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               D  +  +      I   +S L+ L    +      +S+  QL D L +       +
Sbjct: 750 QSSSDELQSKLNEKHQEISELQSKLNELIENNESSSDELQSKLIQLSDELKEKDEKLKSL 809

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-------- 204
            +  I +  + +++  +   S+   +  L  K + +  L+ ++Q     +++        
Sbjct: 810 DSIIIENQEKLVQLTKSNQDSLDELQSKLNEKQNEINELIENNQSSSNELQSKLNEKQNE 869

Query: 205 ---LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
              L E N  S ++L  +    ++   EL+  ++E++N +  + E  + ++ E  + L +
Sbjct: 870 INLLIENNQSSSDELQSKLNEKHQEINELQSKLNEKQNKINELVENNESSSDELQSKLIQ 929

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +S  L++ +       S +   ++   Q
Sbjct: 930 LSDQLQEKENQLKSFESSIIERDEKLNQ 957



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 75/211 (35%), Gaps = 11/211 (5%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L+    +   +L         N+   I+  +S+LD L +K +  +        QL++ 
Sbjct: 693 DQLIQSNQVTVNELQSKLNEKEININQLIENNQSSLDELQSKLNEKQNEI----NQLIEN 748

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                       N     +          + +   +  +L++K   L   L    + L  
Sbjct: 749 NQSSSDELQSKLNEKHQEISELQSKLNELIENNESSSDELQSKLIQLSDELKEKDEKLKS 808

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE----LYDEANLEFAN 257
           + ++  +N   Q  L Q  +    S  EL+  ++E++N +  + E      +E   +   
Sbjct: 809 LDSIIIEN---QEKLVQLTKSNQDSLDELQSKLNEKQNEINELIENNQSSSNELQSKLNE 865

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
              EI+  +E NQ +  +  SKL    +   
Sbjct: 866 KQNEINLLIENNQSSSDELQSKLNEKHQEIN 896



 Score = 43.5 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 79/202 (39%), Gaps = 8/202 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--S 150
              I  +   I  L+ +++ ++  ++ L    +      +S+  QL D L +       +
Sbjct: 569 ESSIIERDEKIDQLQDNLNEKQDKINELVENNESSSDELQSKLIQLSDQLQEKDEKLLNN 628

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +     + S     + K+  +  I  N+   +  +S L  L    +     +++L     
Sbjct: 629 QSIINELQSNLNENQNKINEL--IENNQSSSDELNSKLIKLSDELKDKNENVRSLETSII 686

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE----LYDEANLEFANYLKEISRDL 266
            +Q+ L+Q  +    +  EL+  ++E++  +  + E      DE   +      EI++ +
Sbjct: 687 ENQDKLDQLIQSNQVTVNELQSKLNEKEININQLIENNQSSLDELQSKLNEKQNEINQLI 746

Query: 267 EQNQRTFADEMSKLTILEKTRE 288
           E NQ +  +  SKL    +   
Sbjct: 747 ENNQSSSDELQSKLNEKHQEIS 768



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 86/241 (35%), Gaps = 10/241 (4%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED--IETTDLIDLKKVSIKNLRC 108
           + +D + EI+   + + +  Q            +L   D   + ++ ++ K   I+ L  
Sbjct: 349 IVDDKLKEIQLKDNQLTQLNQQHEIDNNKNNQMILELNDNISKISNQLNEKDNKIQELSK 408

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
               ++  ++   +  D L+        +LL+ L   +   +K     +      +    
Sbjct: 409 QSIDKQKEIENSTSSSDQLQLKLNDISNELLEKLNDINQLSNK-----LQDKENQILEIN 463

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
            ++       +  +N+ + L     S   +L +  N          + +++         
Sbjct: 464 NKLNEKENQLISKDNQLNQLIENNESSSDELKLKLNQLSDEL---QEKDEKLLNNQSVIN 520

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           EL+ N++E +N +  + E    ++ E    L ++S  L++         S +   ++  +
Sbjct: 521 ELQSNLNENQNKINELIENNQSSSDELKLKLNQLSDKLQEKDEKLKSLESSIIERDEKID 580

Query: 289 Q 289
           Q
Sbjct: 581 Q 581


>gi|291513623|emb|CBK62833.1| RND family efflux transporter, MFP subunit [Alistipes shahii WAL
           8301]
          Length = 337

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 57/145 (39%), Gaps = 21/145 (14%)

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA--QQSQPLMKIVPH 324
           +Q ++  A    +  ++   ++   + SPI+G +V  +++ S +    Q    +M+I   
Sbjct: 125 QQIEQAKAQLDVQREVVANLKKNIEVRSPISG-VVTARNYESGDLFAQQPILHIMQI--- 180

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
                + A ++ +   +VK G    +    + D    +F   +  I P +          
Sbjct: 181 -DPLKVIANISEQYFPNVKVGMPVKLAVDIFPDE---EFTGTVSLIYPALDPTTRT---- 232

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
             ++V +K+ +   +     LR G 
Sbjct: 233 --FKVEVKVPNAKRT-----LRPGM 250



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 3/81 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIE-TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
           I +  VE G  + +G  ++T +  + T  L+ LK V     R     E   +     + +
Sbjct: 71  IDRIYVEVGDPVREGQLVVTLDPTQYTQQLVQLKTVEDDYNRLLPVYEAGGIS--TQQIE 128

Query: 126 VLEKAFESREEQLLDFLGKYH 146
             +   + + E + +      
Sbjct: 129 QAKAQLDVQREVVANLKKNIE 149


>gi|264678252|ref|YP_003278159.1| efflux transporter RND family, MFP subunit [Comamonas testosteroni
           CNB-2]
 gi|262208765|gb|ACY32863.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           CNB-2]
          Length = 433

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 44/120 (36%), Gaps = 3/120 (2%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---D 111
             V+++   SG ++    + G+ +  G  L T +       +D  +  +   +  +    
Sbjct: 95  QRVDVQPRVSGAVQAVHFKEGALVRAGDLLFTVDPAPYVAEVDRAEAQVVAAKARMAYTQ 154

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           +E      L ++  + +K ++ R     +      +  + +    ++  Y  +K  ++  
Sbjct: 155 SESERATRLWDERAIAQKEYDERVNARREADANLRAAQAALQTAKLNLGYTQVKAPVSGR 214



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 37/106 (34%), Gaps = 8/106 (7%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V++ D  + + +  K+ +   ++  E+   L     +  +   E  N  +E   +L   
Sbjct: 132 YVAEVDRAEAQVVAAKARMAYTQSESERATRLWDERAIAQKEYDERVNARREADANLRAA 191

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           Q       + L   +       + +P++G +   +  +  N     
Sbjct: 192 Q-------AALQTAKLNLGYTQVKAPVSGRVGRIEV-TVGNLVSSG 229


>gi|257056833|ref|YP_003134665.1| hypothetical protein Svir_28570 [Saccharomonospora viridis DSM
           43017]
 gi|256586705|gb|ACU97838.1| hypothetical protein Svir_28570 [Saccharomonospora viridis DSM
           43017]
          Length = 395

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 67/195 (34%), Gaps = 2/195 (1%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDF-LNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
               ++ L +    + +   + E S +     +    +   +E    +L +   +  +  
Sbjct: 90  RLQRMLRLAQEEASDTKARAEAEASHIRAKAESDASAMRARYEQMLTELAERRKQMEAEH 149

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +KV     +   R L         +         +       ++  Q+    M+ L E+ 
Sbjct: 150 AKVLEDARAEAQRILTEAAEERDRLDREAEQRRTQIEE-DFEIAMSQRRTEAMRVLAEQE 208

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           A S+ +  ++ R   +    +R  + ++K   +   E     ++E AN  K+ S      
Sbjct: 209 AASKAEAERRVREASEEAAAIRAQVADEKAKAQAEIERRRRESIEDANRRKQDSISEANA 268

Query: 270 QRTFADEMSKLTILE 284
           +   A + +K  + E
Sbjct: 269 RVAEASDEAKRRVRE 283


>gi|254495775|ref|ZP_05108687.1| RND family efflux transporter MFP subunit [Legionella drancourtii
           LLAP12]
 gi|254354932|gb|EET13555.1| RND family efflux transporter MFP subunit [Legionella drancourtii
           LLAP12]
          Length = 377

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 67/199 (33%), Gaps = 20/199 (10%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRD--LEQNQRTFADEMSKLTILEKTREQK 290
            + + +++   +         + A Y         ++ ++    +  +++     T ++K
Sbjct: 105 ELGQLQSLQAQVELAKITYQRDKAQYAARAVSKQTVDTDEWNLKNLQAQVAQQAATVDKK 164

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV 350
           T+ +P +G  +   + +   Y      +  +       Y    +  + +  +K G    V
Sbjct: 165 TLRAPFSGQ-LGINNVNPGQYLNVGDTVTTLQALD-PIYADFYLPQQALAQLKMGQKVKV 222

Query: 351 RFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFP 410
               + D   K F   I  I P++     N++            +    + + +L+ G  
Sbjct: 223 VTDTFPD---KTFAGDITTIQPLVDSNTRNVEV-----------EATLPNPDFQLKPGMF 268

Query: 411 AEVLFTAKNTTLAQEIIHP 429
             V    ++T   + I  P
Sbjct: 269 VHVTVNVESTR--KYITLP 285


>gi|220935905|ref|YP_002514804.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219997215|gb|ACL73817.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 358

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 77/268 (28%), Gaps = 26/268 (9%)

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           + R       R  +  +    + + +  +  LL+   +     +         +      
Sbjct: 30  LTREPPQINQRAEAQPMTVAVMRSAAQTVERLLTLQGEVQADQRVTVRAETAGRIAALPV 89

Query: 220 ERIVYKSTLELRENIH--------EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           E     S  E+   I          +        E    A  + A    +    +E    
Sbjct: 90  ELGQRVSAGEVIARISMDDRDARLRRAEAAVRGRETDYRAAQQLAREGFQAQLRVETALA 149

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                 ++L  +        I +PIAG +V ++     ++  ++ P+ +++  +      
Sbjct: 150 ELEAARAELEAVRLDIANTHIRAPIAG-VVNHRYAEVGDFVGRADPVAEVL-ENHPLRAV 207

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
            +V    +  V+ G  A V F     +   +    +  I                + V +
Sbjct: 208 VQVPQHNVHRVQVGGPAHVSF-----VDGSEHTGTVRYISARADTTTRT------FRVEI 256

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
            + +   S     L +G   +V    + 
Sbjct: 257 TVPNEERS-----LPSGVSVQVRIPVEQ 279


>gi|195451069|ref|XP_002072754.1| GK13514 [Drosophila willistoni]
 gi|194168839|gb|EDW83740.1| GK13514 [Drosophila willistoni]
          Length = 606

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 13/211 (6%)

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-- 169
            E+ A++        LE+A ++ +        +     SK+      S Y++   +    
Sbjct: 46  AERKAMEAYRFDSSALERAADAAKTLERSKHAREALELSKMQESTRQSEYQTKVKEYEAH 105

Query: 170 -RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
                +   R+D E +   L       Q+       L  K    ++ L QQ+R+   +  
Sbjct: 106 IEQAKVEQKRIDHEERRKTLVEETKQQQQRAQYQDQLSRKRY--EDQLAQQQRVQEDNLR 163

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +  E++  Q+ M R   E   E  ++  N LK +  +L    R   D  ++   LEK R 
Sbjct: 164 KQEESVQRQEAMRRQTIE--HEIEMKEKNRLKLLEHELRAKAR--VDRENRDINLEKIR- 218

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
              + +    T V     ++ +        M
Sbjct: 219 ---LKAQEHRTTVLEGIRTAGSVIGAGAEAM 246


>gi|159032468|gb|ABW87635.1| slow myosin heavy chain 3 [Danio rerio]
          Length = 1917

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 75/214 (35%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   LR  +D   S ++ +      LEK   + E+Q+ ++  KY
Sbjct: 1187 QIDNLQRVKQKLEKEKS--ELRLELDDVVSNMEQIAKAKANLEKMCRTLEDQMSEYRTKY 1244

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                + R L+ K + +  +   +     +   L+  L    
Sbjct: 1245 EEGQRSINDFTMKKAKLQTENGELSRQLEEKDSLVSQLTRGKQSYTQQIEDLKRQLEEEV 1304

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +        L +Q     ++  EL+ ++ +  + +      Y+   ++  
Sbjct: 1305 KAKNALAHAVQSARHDAELLREQYEEEQEAKAELQRSLSKANSEVAQWRTKYETDAIQRT 1364

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L++  + L Q  +   + +  +     + E+ 
Sbjct: 1365 EELEDAKKKLAQRLQDAEEAVEAVNAKCSSLEKT 1398



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/207 (11%), Positives = 64/207 (30%), Gaps = 6/207 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E  ++ +  + +       I+  K            LE+A    E        K+  + S
Sbjct: 1123 ELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATASTLRKKHADSVS 1182

Query: 151  KV------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             +             + +        +  +  N   +    + L  +  + +  ++  + 
Sbjct: 1183 DLGEQIDNLQRVKQKLEKEKSELRLELDDVVSNMEQIAKAKANLEKMCRTLEDQMSEYRT 1242

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             +E+   S ND   ++  +     EL   + E+ +++  +         +  +  +++  
Sbjct: 1243 KYEEGQRSINDFTMKKAKLQTENGELSRQLEEKDSLVSQLTRGKQSYTQQIEDLKRQLEE 1302

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
            +++          S     E  REQ  
Sbjct: 1303 EVKAKNALAHAVQSARHDAELLREQYE 1329



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 67/189 (35%), Gaps = 5/189 (2%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISS 159
              ++L   +   K++ +   +  + +++  ++ +E++ D   +   +   +         
Sbjct: 1454 EARSLSTELFKLKNSYEESLDHLESMKRENKNLQEEIADLTEQIGESGKNIHELEKMRKQ 1513

Query: 160  VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
            + +      T +     +    E K   LRA L  +Q    + + L EK+   +     Q
Sbjct: 1514 LEQEKAEIQTALEEAEGSLEHEEGKI--LRAQLEFNQVKADIERKLSEKDEEMEQAKRNQ 1571

Query: 220  ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
            +R++      L      +   LR   ++  + N E    L + +R   + Q+        
Sbjct: 1572 QRMIDTLQSSLESETRSRNEALRLKKKMEGDLN-EMEIQLSQANRQASEAQKQLKSLHGH 1630

Query: 280  LTILEKTRE 288
            L   +   +
Sbjct: 1631 LKDAQLQLD 1639



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 68/217 (31%), Gaps = 20/217 (9%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTE-----KSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            +        + +++     ++ E     ++ L+F   K D+  K  E  EE  ++   + 
Sbjct: 1513 QLEQEKAEIQTALEEAEGSLEHEEGKILRAQLEFNQVKADIERKLSEKDEE--MEQAKRN 1570

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                       + S  RS    L   + +  +  ++E + S      S  QK L  +   
Sbjct: 1571 QQRMIDTLQSSLESETRSRNEALRLKKKMEGDLNEMEIQLSQANRQASEAQKQLKSLHGH 1630

Query: 206  FEKNAVSQNDLNQ-----------QERIVYKSTLELRENIH--EQKNMLRHINELYDEAN 252
             +   +  +D  +            ER       EL E     EQ    R + E      
Sbjct: 1631 LKDAQLQLDDALRGNDDLKENIAIVERRNNLLQAELDELRSLVEQTERGRKLAEQELMDV 1690

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             E    L   +  L   ++    + ++L    +   Q
Sbjct: 1691 SERVQLLHSQNTSLLNQKKKLEGDNTQLQTEVEEAVQ 1727


>gi|148263363|ref|YP_001230069.1| secretion protein HlyD family protein [Geobacter uraniireducens
           Rf4]
 gi|146396863|gb|ABQ25496.1| secretion protein HlyD family protein [Geobacter uraniireducens
           Rf4]
          Length = 361

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 25/216 (11%)

Query: 20  MTLLSIIGIIGLITWSILLPIEI----------------SVSSSGEILN---EDNVVEIK 60
           +  L+IIG++  +  + +  IE                  + ++G I +       + I 
Sbjct: 6   LFFLAIIGLVAGLVSAYIFGIEKKPQPPVFNPASNPYGKGIYANGIIESYQTNGENINIY 65

Query: 61  SPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS----- 115
              SGII +  V  G  + QGTPLL  ED      +  +K   +     ++  K+     
Sbjct: 66  PEVSGIITRILVAEGQSVRQGTPLLMIEDSVQRATVAQQKSQAEAALALLEELKAMPRKE 125

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            L+    + D    + ++ ++QL      Y      V    + +   ++ +    +  + 
Sbjct: 126 NLEVAKAQVDFASASLKNAQDQLDKQRQSYALNPKSVSKIDLDNAENAVHVAKANLE-VA 184

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
             + +L    + +  + +  ++   + K     +A+
Sbjct: 185 RRQYELTKAGAWIYDIRNQEKQHQALTKAYMASDAL 220


>gi|29421206|dbj|BAB21840.2| KIAA1749 protein [Homo sapiens]
          Length = 1047

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 63/189 (33%), Gaps = 6/189 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS-- 150
               +  +         +   +   + L  + + LE+     + Q+ D  G         
Sbjct: 552 ASRSNTSEQDQAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQIEDLKGDEAKAKETL 611

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K +   I  +  +L       +     R  LEN+    +  LS   ++   +    ++ +
Sbjct: 612 KKYEGEIRQLEEALVHARKEEKEAVSARRALENELEAAQGNLSQTTQEQKQLSEKLKEES 671

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI----SRDL 266
             +  L + +  +      L + I + +  +  I E    + LE  N L E      R+L
Sbjct: 672 EQKEQLRRLKNEMENERWHLGKTIEKLQKEMADIVEASRTSTLELQNQLDEYKEKNRREL 731

Query: 267 EQNQRTFAD 275
            + QR   +
Sbjct: 732 AEMQRQLKE 740



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/224 (11%), Positives = 74/224 (33%), Gaps = 3/224 (1%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V+N   I +    +     E     + K      L+  ++  +  L     +   ++
Sbjct: 376 QLEVKNQQNIKEERERMRANLEELRSQHNEKVEENSTLQQRLEESEGELRKNLEELFQVK 435

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E  + ++ D   +      +  +    S  R     +  +     +  DL       
Sbjct: 436 MEREQHQTEIRDLQDQLSEMHDE-LDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQ 494

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             LL   +++LT +K   ++   S   ++++ +         LRE++ E    +  +   
Sbjct: 495 EDLLRKRERELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASR 554

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            + +  + A     + + L++          +L       +++ 
Sbjct: 555 SNTSEQDQAGTEMRV-KLLQEENEKLQGRSEELERRVAQLQRQI 597



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 74/209 (35%), Gaps = 10/209 (4%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ++ +  +  +L ++  +     ++ EKS L  +      ++      EE+L D+    
Sbjct: 719 QLDEYKEKNRRELAEMQRQLKEKTLEAEKSRLTAMK-----MQDEMRLMEEELRDYQRAQ 773

Query: 146 HS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               T  ++    +  +   L+ K             +E+K S L   L   +++     
Sbjct: 774 DEALTKRQLLEQTLKDLEYELEAKSHLKDDRSRLVKQMEDKVSQLEMEL---EEERNNSD 830

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L E+ + S+  + Q    + +     ++   ++ ++ R   +L         +Y     
Sbjct: 831 LLSERISRSREQMEQVRNELLQERAARQDLECDKISLERQNKDLKSRIIHLEGSYRSSKE 890

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTI 292
             + Q +   A+   +L   E+ R    +
Sbjct: 891 GLVVQMEARIAELEDRLESEERDRANLQL 919


>gi|328954013|ref|YP_004371347.1| efflux transporter, RND family, MFP subunit [Desulfobacca
           acetoxidans DSM 11109]
 gi|328454337|gb|AEB10166.1| efflux transporter, RND family, MFP subunit [Desulfobacca
           acetoxidans DSM 11109]
          Length = 391

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/247 (11%), Positives = 92/247 (37%), Gaps = 31/247 (12%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSG---EILNED----------- 54
           + R      +R  +   + ++ L+ W+     + +V +     +++              
Sbjct: 1   MARMTVREPRRPIIW--VSVLALLVWAA-ACGDRNVYAPPPPPKVIVSQPIRQSVTDYLE 57

Query: 55  --------NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
                   N V++++   G ++K   ++G ++ +G  L   +       +   +  +   
Sbjct: 58  FTGNTQAFNTVKLRARVEGFLEKVLFQDGDRVKKGQVLFIIQQNTYQAKLQQAEAEVLAQ 117

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  +  E +  +F+     + +KA  + +  +  +  +  +  + V     +     L +
Sbjct: 118 KARL--EHAQTEFVRFSSLLRQKA--AAQTDVDRWRYERDAARAAVLAGEANRELAKLNL 173

Query: 167 KLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
             T + + +  R+D  L++  +L+ A   +   ++  +  ++    +++ DL Q      
Sbjct: 174 SYTTVVAPFDGRIDRRLKDVGNLVGAGEETVLAEINQIDPIYAYYTINERDLLQVMAHAQ 233

Query: 225 KSTLELR 231
           +S  E  
Sbjct: 234 ESPEEAE 240


>gi|292622124|ref|XP_691467.4| PREDICTED: myosin-10-like [Danio rerio]
          Length = 2015

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 64/201 (31%), Gaps = 5/201 (2%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                D      K +   +  E+   +  + + +    +  SR  Q            +K 
Sbjct: 1474 QKKFDQCLAEEKAVSARLQEERDRAEAESREKETRFLSL-SRALQEATEQRDELERTNKQ 1532

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                +  +  +       +  +  +R  LE ++  L+      + +L   +N   +  V+
Sbjct: 1533 LRLEMEQLVNAQDDVGKNVHELERSRRALETEAQSLKEQTQELEDELGEAENARLRLEVT 1592

Query: 213  QNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL---KEISRDLEQ 268
               L  Q ER +     +  E        +R +  + +E   + A  L   K++  +L++
Sbjct: 1593 LQALRAQFEREISTKEEKGEEKRRALNKQVRELETMLEEEKTQRAQALTVKKQLETELQE 1652

Query: 269  NQRTFADEMSKLTILEKTREQ 289
             +              +  ++
Sbjct: 1653 AEAQVEAANRGREEAFRQMKR 1673



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 79/223 (35%), Gaps = 22/223 (9%)

Query: 88   EDIETTDLIDLK-KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            +++   +   L+ +V+++ LR   + E S  +    K +   +A   +  +L   L +  
Sbjct: 1577 DELGEAENARLRLEVTLQALRAQFEREISTKEE---KGEEKRRALNKQVRELETMLEEEK 1633

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--- 203
            +  ++        +   L+    ++ +    R +   +   L+  +    ++L   K   
Sbjct: 1634 TQRAQALTVK-KQLETELQEAEAQVEAANRGREEAFRQMKRLQTQMKELIRELDETKLAR 1692

Query: 204  -NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA----------- 251
              +  ++  S+  L   E  + + T +L  +  +++   +  +E+ DE            
Sbjct: 1693 DEIVAQSKDSEKRLQTLEAELLQLTEDLSVSERQKRQAQQERDEMADEIINNATGKSALF 1752

Query: 252  --NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                     + ++  +LE+ Q        +        E  T+
Sbjct: 1753 DEKRRLETRITQMEEELEEAQSNAELLAERQRKSTLQIETLTV 1795



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 67/222 (30%), Gaps = 23/222 (10%)

Query: 74   NGSQILQGTPL--LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G  +     L  ++    E    +  ++  I  L+  ++ E +            E   
Sbjct: 1085 EGEAVEAQEQLSDMSLLVTELRGSLSQREKEITTLQTRLEEEGARRT---------EAQR 1135

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
              RE        K      +          R L  +L  +R+   + LD       LR+ 
Sbjct: 1136 ALREAMSQVSELKEEVENERGMRERAEKQRRDLGEELEALRTELEDTLDTTAAQQELRSR 1195

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
              +   +L   + L E+    +  L++       +   L+E +   K   + + +     
Sbjct: 1196 REAELGEL--QRCLEEETRRHEAQLSELRIKHTAAIDSLQEQLDNAKRSRQSLEKAKAVL 1253

Query: 252  NLEFANYLKEI----------SRDLEQNQRTFADEMSKLTIL 283
              E  N   E+           R  ++ +    +  ++L+  
Sbjct: 1254 EEERLNLSAELKTLQGGKMESERGRKRAEGQLQELNARLSQA 1295



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 66/202 (32%), Gaps = 11/202 (5%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
             E  D +D      + LR   + E   L         LE+     E QL +   K H+  
Sbjct: 1177 TELEDTLDTTAAQ-QELRSRREAELGELQR------CLEEETRRHEAQLSELRIK-HTAA 1228

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
                   + +  RS +        +   RL+L  +   L+      ++     +   ++ 
Sbjct: 1229 IDSLQEQLDNAKRSRQSLEKAKAVLEEERLNLSAELKTLQGGKMESERGRKRAEGQLQEL 1288

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEISRDL 266
                +   ++     +   +L+  +    + L   +      + E     + L ++   L
Sbjct: 1289 NARLSQAEREREEREERLGKLQSELESLSSSLSSSDSKSHRLHKEVSSLESQLHDVQELL 1348

Query: 267  EQNQRTFADEMSKLTILEKTRE 288
            ++  R      S++  LE+ + 
Sbjct: 1349 QEETRQKLALGSRVRALEEEKA 1370


>gi|238757591|ref|ZP_04618775.1| Macrolide-specific efflux protein macA [Yersinia aldovae ATCC
           35236]
 gi|238704096|gb|EEP96629.1| Macrolide-specific efflux protein macA [Yersinia aldovae ATCC
           35236]
          Length = 342

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 75/217 (34%), Gaps = 24/217 (11%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL---------KE 261
            +QN + + E  +     +L +   E +     +    + A L+  +             
Sbjct: 68  AAQNQIKEVEATLQDLNAQLAQAKAEAQLAAVTLRRQQELAKLQAVSRQDLDQASTTLAV 127

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LM 319
            +  +E  +       + L   +   +   I +P+ G +V   +          Q   ++
Sbjct: 128 KNAQVETIKAQINKTKASLDTAKINLDYTQISAPMDGDVVQITTLQGQTVIAAQQAPNIL 187

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            +        + AKV+   + H+K G  A+  F    D   K+F  +++ I P   + ++
Sbjct: 188 TLA-DMSTMLVNAKVSEADVIHLKPGMKAS--FTVLGD-PGKRFDGVLKDIQPTPEKVND 243

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +    +Y    ++ +       + L+    A+V   
Sbjct: 244 AI----FYSARFEVPNPDRL---LRLQ--MTAQVSIQ 271



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 55/138 (39%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ +V ++G++     V ++ +  SG ++K  VE G Q+ QG  L   +     + I   
Sbjct: 18  LQQNVLATGKLDAVRKV-DVGAQVSGQLEKLYVEIGDQVKQGQLLAMIDPQAAQNQIKEV 76

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++++L   +   K+            ++  + +     D      ST   V N  + +
Sbjct: 77  EATLQDLNAQLAQAKAEAQLAAVTLRRQQELAKLQAVSRQDL--DQASTTLAVKNAQVET 134

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +      + +  +N
Sbjct: 135 IKAQINKTKASLDTAKIN 152


>gi|224023866|ref|ZP_03642232.1| hypothetical protein BACCOPRO_00583 [Bacteroides coprophilus DSM
           18228]
 gi|224017088|gb|EEF75100.1| hypothetical protein BACCOPRO_00583 [Bacteroides coprophilus DSM
           18228]
          Length = 416

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 113/311 (36%), Gaps = 23/311 (7%)

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           R  ID E   ++ +    D LE  +   E  +   L    +T        I +   SL  
Sbjct: 40  RLRIDAENVRMEEVK-HTDFLE--YVDVEGVVQPILTLLVNTREAGNVERIVAEEGSLMK 96

Query: 167 KLTRMRSIYLNRL--DLENKSSLLRALLSSHQKDLTMMKN----LFEKNAVSQNDLNQQE 220
           +   +  +    L  D+E++         S+Q+    M+     L +++  +  DLN+ +
Sbjct: 97  QGDTILILSNAHLMHDIEDQRDEWEKQRISYQEKALEMEQKTLTLRQQSLQAAYDLNKLK 156

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELY---DEANLEFANYLKEISRDLEQNQRTFADEM 277
           +       E    I  +  +    +E     +   L+  +   + +  + + +    D  
Sbjct: 157 KNFELEKEEYAMGIRSKAQLEVSEDEFRYKTESTRLQMESLRSDSAMTVIRKELLRNDRE 216

Query: 278 SKLTILEKTREQKT---ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
            +   LE++ ++     + +P+ G + + +  +      + + + + V       I   +
Sbjct: 217 REYKKLERSLKRMEDLVVRAPLDGQLSFVKV-TPGQQVAEGENIAE-VKVLDQFKIHTSL 274

Query: 335 TPKQIQHVKKGYTATV-----RFPHYADIREKKFKAIIEKIDPI-ISQQDNNLQTQEYYE 388
           +   I  V  G  AT+     ++P        + K    ++D +   +  +N++  + + 
Sbjct: 275 SEYYIDRVTTGLPATIIWQDKKYPLKVSKVVPEVKDRTFEVDLVFTGEMPDNVRLGKSFR 334

Query: 389 VILKITDLAFS 399
           V +++     +
Sbjct: 335 VQIELGQPEQA 345


>gi|242211258|ref|XP_002471468.1| predicted protein [Postia placenta Mad-698-R]
 gi|220729424|gb|EED83298.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1219

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/195 (11%), Positives = 58/195 (29%), Gaps = 8/195 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                 +      +K+ R  +D+E++     + +        E     +           
Sbjct: 385 TARRAEVYGTLEVLKSTRARLDSERAKARKEHEQRAKERAQVEQARAAIATKRMNAEEGR 444

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN---LF 206
            +     + ++     ++                ++      L + Q+ +  M+    L 
Sbjct: 445 LEDTRKRVQAIVERTVLEEQNEMLEKERFRREAARTRAEEEHLEAEQRRVEAMEEQIRLE 504

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR---HINELYDEANLEFANYLKEIS 263
           E+  + + +L + E    +   E    + E++ +      I      A LE      E  
Sbjct: 505 EQREMREKELARIE--TGRMQAEEERLVAERRRIQATTEQIALEQQRAILEKEQIRLEAE 562

Query: 264 RDLEQNQRTFADEMS 278
           R  ++ +R    E+ 
Sbjct: 563 RVRQEAERRRDQEVQ 577



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/163 (11%), Positives = 54/163 (33%), Gaps = 14/163 (8%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ED        +++  ++     ++ E+   +    + +      E R  + ++   + 
Sbjct: 444 RLEDTRKRVQAIVERTVLEEQNEMLEKERFRREAARTRAEEEHLEAEQRRVEAMEEQIRL 503

Query: 146 HSTC-------SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                      +++    + +    L  +  R+      ++ LE + ++L       + +
Sbjct: 504 EEQREMREKELARIETGRMQAEEERLVAERRRI-QATTEQIALEQQRAILEK--EQIRLE 560

Query: 199 LTMMKNLFEKNAVSQNDLN----QQERIVYKSTLELRENIHEQ 237
              ++   E+    +  +      Q+R V K    LRE   + 
Sbjct: 561 AERVRQEAERRRDQEVQVGPARHLQDREVQKDEPALREQETQT 603


>gi|170731640|ref|YP_001763587.1| RND family efflux transporter MFP subunit [Burkholderia cenocepacia
           MC0-3]
 gi|169814882|gb|ACA89465.1| efflux transporter, RND family, MFP subunit [Burkholderia
           cenocepacia MC0-3]
          Length = 401

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/265 (11%), Positives = 78/265 (29%), Gaps = 43/265 (16%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA---VSQNDLNQQ 219
             K  +       +  L +   + + +  + +  +   +  +L +  A   VS+ +L   
Sbjct: 77  QRKAAVASKGQGRVEWLGVLEGTRVKQNEIIARLESNDVQASLAQARAQVQVSRANLGVA 136

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +  +  + + LR              +L  +        + +    L+ +Q       + 
Sbjct: 137 QAELKDAEIALRRTSALAPKGAVPAAQLDTDTA-----RVNKARATLDSDQAAIVSAEAN 191

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSF-------------SSSNYAQQSQPLMKIVPHSK 326
               +   +Q  I +P  G ++   +              S       +   M+      
Sbjct: 192 AQAAQVAVDQTVIRAPFDGIVLAKHANVGDNITPFSSASDSKGAVVTIAD--ME------ 243

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A V    I  ++      ++     D+R   F   + +I P + +    +     
Sbjct: 244 TLEVEADVAESNIAKIRAEQPCEIQLDALPDLR---FAGRVSRIVPTVDRSKATV----- 295

Query: 387 YEVILKITDLAFSDNNIELRNGFPA 411
             V ++     F D +  +     A
Sbjct: 296 -LVKVR-----FVDRDERVLPDMSA 314



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/123 (10%), Positives = 43/123 (34%), Gaps = 4/123 (3%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +  ++++G ++ +     + S   G ++   V  G+++ Q   +   E  +    +   +
Sbjct: 65  DTQLNATGYVVPQRKA-AVASKGQGRVEWLGVLEGTRVKQNEIIARLESNDVQASLAQAR 123

Query: 101 VSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             ++  R ++     E    +    +   L         QL     + +   + + +   
Sbjct: 124 AQVQVSRANLGVAQAELKDAEIALRRTSALAPKGAVPAAQLDTDTARVNKARATLDSDQA 183

Query: 158 SSV 160
           + V
Sbjct: 184 AIV 186


>gi|113868140|ref|YP_726629.1| multidrug resistance efflux pump, MFP family [Ralstonia eutropha
           H16]
 gi|113526916|emb|CAJ93261.1| multidrug resistance efflux pump, MFP-family [Ralstonia eutropha
           H16]
          Length = 393

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 50/136 (36%), Gaps = 5/136 (3%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +    +V  +++   G + +  V  G Q+ +G  L + +D      +   + ++    
Sbjct: 74  GTVRPLRDV-VVRTQIDGQLMRLHVREGQQVARGELLASLDDRPIQAALGQARATLAMNL 132

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +   +  L     +Y  L  A     + L   L       + V     + V   +++ 
Sbjct: 133 AQLRAAELDL----GRYRTLIAADAIPRQTLDQQLATVEQLRATVQGNRAAIVAEEVRLS 188

Query: 168 LTRMRSIYLNRLDLEN 183
            TR+RS    R+ L N
Sbjct: 189 YTRIRSPIAGRIGLRN 204



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 49/150 (32%), Gaps = 10/150 (6%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQ------QERIVYKSTL 228
             + +       LR ++   Q D  +M+    +   V++ +L         +  + ++  
Sbjct: 67  ARQAESVGTVRPLRDVVVRTQIDGQLMRLHVREGQQVARGELLASLDDRPIQAALGQARA 126

Query: 229 ELRENIHEQKNMLRHINELYDEANLEF--ANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            L  N+ + +     +         +      L +    +EQ + T     + +   E  
Sbjct: 127 TLAMNLAQLRAAELDLGRYRTLIAADAIPRQTLDQQLATVEQLRATVQGNRAAIVAEEVR 186

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
                I SPIAG I   ++    N  +   
Sbjct: 187 LSYTRIRSPIAGRI-GLRNVDEGNLVRVGD 215


>gi|118368453|ref|XP_001017433.1| Kinesin motor domain containing protein [Tetrahymena thermophila]
 gi|89299200|gb|EAR97188.1| Kinesin motor domain containing protein [Tetrahymena thermophila
           SB210]
          Length = 736

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 54/155 (34%), Gaps = 1/155 (0%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           + + + L   L +  S   K +   +  +    K++    + +    +D E +    R  
Sbjct: 400 DEKVKLLQQKLEQEKSEVEKKYQNEVKKIEEDKKLQEKEKQQLLQQLMDKEEREQKQREQ 459

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                K L  M+    +         ++ER + K+  EL++     + +   I    D A
Sbjct: 460 QEKLLKKLQKMQEKVIQGDEIMQKALEKERELNKAQQELQQRKERDRQIAEQIKRNEDLA 519

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
            LE     +  + + +   +     + +L  +E  
Sbjct: 520 -LEINQKYRSQAEEAQDKTKRIKALVGRLKQIESE 553


>gi|116686122|ref|NP_036442.3| chromosome-associated kinesin KIF4A [Homo sapiens]
 gi|62512161|sp|O95239|KIF4A_HUMAN RecName: Full=Chromosome-associated kinesin KIF4A; AltName:
           Full=Chromokinesin-A
 gi|57208853|emb|CAI41024.1| kinesin family member 4A [Homo sapiens]
 gi|57209108|emb|CAI41487.1| kinesin family member 4A [Homo sapiens]
 gi|119625746|gb|EAX05341.1| kinesin family member 4A, isoform CRA_a [Homo sapiens]
 gi|119625747|gb|EAX05342.1| kinesin family member 4A, isoform CRA_a [Homo sapiens]
 gi|189053700|dbj|BAG35952.1| unnamed protein product [Homo sapiens]
          Length = 1232

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 8/186 (4%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             + I+     ++K++ ++ +    + E+  L+    K D  +     R  + L  L   
Sbjct: 549 QLQPIQYQYQDNIKELELEVINLQKEKEELVLELQTAKKDANQAKLSERRRKRLQELEGQ 608

Query: 146 HSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENK-SSLLRALLSSHQKD 198
            +   K  N          S  R++      +R +   R+ L  +            QK 
Sbjct: 609 IADLKKKLNEQSKLLKLKESTERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKK 668

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +  L E++   Q +L + ER   K +  LR    E     + + +   +   E A+ 
Sbjct: 669 DKEVIQLKERDRKRQYELLKLERNFQKQSNVLRRKTEEAAAANKRLKDALQKQR-EVADK 727

Query: 259 LKEISR 264
            KE   
Sbjct: 728 RKETQS 733



 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 26/234 (11%), Positives = 87/234 (37%), Gaps = 14/234 (5%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            VE   ++ +G      +  +  + I L + + + +   ++  +       +   ++E  
Sbjct: 395 LVEENEKLSRGLSEAAGQTAQMLERIILTEQANEKMNAKLEELRQHAACKLDLQKLVETL 454

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN----RLDLENKSS 186
            +   ++ ++ +       +++ +  ++ +  ++   + +   +  +    R      + 
Sbjct: 455 EDQELKENVEIICNLQQLITQLSDETVACMAAAIDTAVEQEAQVETSPETSRSSDAFTTQ 514

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                    ++ + + K L  K A+++  + Q +  +     + ++NI E +  + ++ +
Sbjct: 515 HALRQAQMSKELVELNKALALKEALAR-KMTQNDSQLQPIQYQYQDNIKELELEVINLQK 573

Query: 247 LYDEANLEFANYLKEI---------SRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  LE     K+           + L++ +   AD   KL    K  + K 
Sbjct: 574 EKEELVLELQTAKKDANQAKLSERRRKRLQELEGQIADLKKKLNEQSKLLKLKE 627


>gi|322495060|emb|CBZ30363.1| hypothetical protein, unknown function [Leishmania mexicana
            MHOM/GT/2001/U1103]
          Length = 2269

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 74/214 (34%), Gaps = 10/214 (4%)

Query: 68   KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            K+        + +    L  +     D    K   ++ +   +D   + +  L  + +  
Sbjct: 1929 KEITETELDTVQKEMNDLQRDLRAAEDRAAEKAREVERMTLDLDALNNRIQDLLEELEEK 1988

Query: 128  EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
               +    + L DF         K     +++  + L       R       + E +  +
Sbjct: 1989 TDQYNQVIKDLDDFANNQSHENEKELLQRLAAREQELFELQEARRG---ENDEHEKQVGV 2045

Query: 188  LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            L+  ++  +        L++     Q +L +  ++   +   LR+   E + +   +  +
Sbjct: 2046 LQDQINRLRDQTDQDNTLYD-GL--QAELARLRKLFLDAEAALRDKTAENEALKDDMEGM 2102

Query: 248  YDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             DE   +    ++E+ ++LE   +  +D + +L 
Sbjct: 2103 IDEHEAQ----MREMEQELEGKGKEVSDALERLE 2132



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/226 (11%), Positives = 80/226 (35%), Gaps = 19/226 (8%)

Query: 82   TPLLTFEDIETTD--LIDLKKVSIKNLRCHI----------DTEKSALDFLNNKYDVLEK 129
              L    D E      ++ K+  ++ LR  +          +  +  L  L  + ++ E 
Sbjct: 1875 EVLAAARDTEKAAMEQLEAKESELEELRSALKDTKVCEKMRENLEYELMQLQKEKEITET 1934

Query: 130  AFESREEQLLDFLGKYHSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
              ++ ++++ D      +   +       +  +   L     R++ +     +  ++ + 
Sbjct: 1935 ELDTVQKEMNDLQRDLRAAEDRAAEKAREVERMTLDLDALNNRIQDLLEELEEKTDQYNQ 1994

Query: 188  LRALLS--SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            +   L   ++ +     K L ++ A  + +L + +        E  + +   ++ +  + 
Sbjct: 1995 VIKDLDDFANNQSHENEKELLQRLAAREQELFELQEARRGENDEHEKQVGVLQDQINRLR 2054

Query: 246  ELYDEANLEFANYLKEISRDLE---QNQRTFADEMSKLTILEKTRE 288
            +  D+ N  +     E++R  +     +    D+ ++   L+   E
Sbjct: 2055 DQTDQDNTLYDGLQAELARLRKLFLDAEAALRDKTAENEALKDDME 2100


>gi|301760108|ref|XP_002915861.1| PREDICTED: coiled-coil alpha-helical rod protein 1-like [Ailuropoda
           melanoleuca]
          Length = 867

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 76/205 (37%), Gaps = 5/205 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              + L+   ++  R  +D E      +  +     +     E Q L  + +      + 
Sbjct: 587 ATDVSLELEQLREERNRLDAEVQLSAHIIQQEVGRAREQGDAERQRLSEVAQQLEQELQR 646

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNA 210
               +++V   L+      R        L  + +  + +   +  +K   +   L E+  
Sbjct: 647 TQESLANVGLQLEAARQGQRESTQEAASLRQELTQQQEIYGQALQEKVAEVETRLREQLL 706

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNML---RHINELYDEANLEFANYLKEISRDLE 267
            ++  LN+  R   K+ + LR+   +        + +  L DEA  E    L +  ++LE
Sbjct: 707 ETERRLNEARREHGKAVVSLRQMQRKATREKERNQELRRLQDEARKEEGLRLTQRLQELE 766

Query: 268 QNQRTFADEMSKLTILEKTREQKTI 292
           +++      + +  +L + ++Q+ +
Sbjct: 767 RDKNFMLATLQQEGLLSRYKQQRLL 791



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 65/207 (31%), Gaps = 7/207 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
               + +     +++V             + L   +    +         EQL +   + 
Sbjct: 545 QLPSLSSRVSYAVRRVHTIQGLMARKLALAQLRQESCPPPLPATDVSLELEQLREERNRL 604

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT----M 201
            +      +     V R+ +      + +      LE +    +  L++    L      
Sbjct: 605 DAEVQLSAHIIQQEVGRAREQGDAERQRLSEVAQQLEQELQRTQESLANVGLQLEAARQG 664

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +   ++ A  + +L QQ+ I  ++   L+E + E +  LR      +    E      +
Sbjct: 665 QRESTQEAASLRQELTQQQEIYGQA---LQEKVAEVETRLREQLLETERRLNEARREHGK 721

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTRE 288
               L Q QR    E  +   L + ++
Sbjct: 722 AVVSLRQMQRKATREKERNQELRRLQD 748


>gi|262190417|ref|ZP_06048674.1| probable RND efflux membrane fusion protein [Vibrio cholerae CT
           5369-93]
 gi|262033698|gb|EEY52181.1| probable RND efflux membrane fusion protein [Vibrio cholerae CT
           5369-93]
          Length = 299

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 70/206 (33%), Gaps = 21/206 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           S   + + + +V   +   R N+   +  L      Y+     FA          ++ + 
Sbjct: 18  SGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKG-SISKESYDEAEA 76

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           ++    + +  L+ T  ++ I +P AG I     F    Y Q       IV     + +R
Sbjct: 77  SYYALSADIESLKATIARREIKAPFAGVIGIRNVF-LGQYLQPGT---DIVRLEDTSVMR 132

Query: 332 AK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
            +  V  + I  +       +    Y       FK  I  I+P +S Q   +Q Q     
Sbjct: 133 LRFTVPQRDISRISLDQEVDIFVDAYPQT---SFKGSISAIEPAVSVQSGLIQVQ----- 184

Query: 390 ILKITDLAFSDNNIELRNGFPAEVLF 415
                     +++ +LR+G  A    
Sbjct: 185 ------ADIPNSDGKLRSGMFARANI 204



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 52/138 (37%), Gaps = 1/138 (0%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +   E+G+Q+ +  PL+  +       +   +  +   +   +  K      +   
Sbjct: 9   GVIDQITFESGTQVAKDQPLVLLDSAVERANLKSTEARLPAAKAKYERYKGLFAKGSISK 68

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           +  ++A  S      D      +   +      + V     + L +      + + LE+ 
Sbjct: 69  ESYDEAEASYYALSADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQPGTDIVRLED- 127

Query: 185 SSLLRALLSSHQKDLTMM 202
           +S++R   +  Q+D++ +
Sbjct: 128 TSVMRLRFTVPQRDISRI 145


>gi|254295538|ref|YP_003061560.1| efflux transporter, RND family, MFP subunit [Hirschia baltica ATCC
           49814]
 gi|254044069|gb|ACT60863.1| efflux transporter, RND family, MFP subunit [Hirschia baltica ATCC
           49814]
          Length = 367

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 77/206 (37%), Gaps = 20/206 (9%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEAN--LEFANYLKEISRDLEQNQRTFAD 275
           + E      +L  RE +   +     ++E   + +  +  +        +++Q +R   +
Sbjct: 78  RIEEGKTLLSLAQREQVALVEAAEATLDEATTQLDRVMRLSKENAIAQSEVDQARRDRDN 137

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             ++L  ++  ++ + +++P  G ++  +  S   Y +    +  ++       +   V 
Sbjct: 138 ASAQLRAVQSRQKDRVLVAPFDG-VLGFRMVSVGTYVRAGDVVATLI-DDSEMKLEFAVP 195

Query: 336 PKQIQHVKKGYTATVRFPHY-ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
              ++ +K+G         Y +D+  + F  +I  ID  I     +          +K+ 
Sbjct: 196 STFLRSLKQGTP----ISAYTSDLPGETFNGMIATIDNAIDPITRS----------IKVR 241

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNT 420
            +  + + + L++G   +V       
Sbjct: 242 AILPNPDQV-LKSGMFMQVTLKTTPR 266



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 28/88 (31%)

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +     ++G +I +G  LL+    E   L++  + ++      +D              
Sbjct: 67  RVTAIFFDDGQRIEEGKTLLSLAQREQVALVEAAEATLDEATTQLDRVMRLSKENAIAQS 126

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVF 153
            +++A   R+               +V 
Sbjct: 127 EVDQARRDRDNASAQLRAVQSRQKDRVL 154


>gi|219849599|ref|YP_002464032.1| secretion protein HlyD family protein [Chloroflexus aggregans DSM
           9485]
 gi|219543858|gb|ACL25596.1| secretion protein HlyD family protein [Chloroflexus aggregans DSM
           9485]
          Length = 497

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/233 (10%), Positives = 64/233 (27%), Gaps = 5/233 (2%)

Query: 50  ILNEDNVVEIKSP-----FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +  E  VV ++        SG++    V  G Q+  G  L   +D      +   + ++ 
Sbjct: 46  VSVEGRVVPLQYAWLRFERSGMVSAILVAEGDQVAAGQALAQLDDRAQRLAVQQAEANLA 105

Query: 105 NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +       +                 + +   +          + +     +   R+ 
Sbjct: 106 RAQARYAQLLAGAAPETRAAAEAAVQVAAAQATQVALSVAAPDEKAALAQLAEAKAARAE 165

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
            +       +   +   +  ++ L A  S+        +   E+ A    D       ++
Sbjct: 166 LLAGADPEVVAQAQAARDQAAANLAAQRSALAAAKVNAQLAVEQAANVLRDRQADYSRIH 225

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
               EL++ + E +     I+      +      +      +   Q   A+  
Sbjct: 226 WENEELKQRLGEDELPQARIDLEAAALHAVQNAEVALAQARINAEQAVQAEIE 278


>gi|206890767|ref|YP_002249782.1| chromosome segregation SMC protein, putative [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206742705|gb|ACI21762.1| chromosome segregation SMC protein, putative [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 1148

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 75/221 (33%), Gaps = 20/221 (9%)

Query: 67  IKKFQVENG---------SQILQGTPLL----TFEDIETTDLIDLKKVSIKNLRCHIDTE 113
           IK+  +  G          QI     L         +E    I L K+        + + 
Sbjct: 127 IKEIFISEGVDIRTYSIIDQIKINEILFKPSQRKSLLEECAGISLYKLKKTESETKLQSA 186

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           K  L  + +  + L+K +   E Q      KY     ++ +  +      +   L  ++ 
Sbjct: 187 KENLQRIEDILNELKKQYSLLERQ-AKKADKYRKVMEELKDAELKVSKTEILNLLGELQK 245

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL-RE 232
           +     +LENK S L+       + +       +K  +++ ++  QER       EL + 
Sbjct: 246 LKNEIENLENKQSKLKEENGKIIEKIN-----HQKKYIAEIEVTIQERDNQIKQGELEKA 300

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            I ++  +L        E   +       I  ++E+ Q+  
Sbjct: 301 KIEKELALLAQEELNKKEQIKKLDEENTSIHDEIEKAQQEL 341



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 23/203 (11%), Positives = 70/203 (34%), Gaps = 8/203 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             + + K  I NL   +   K+ ++ L NK   L++    +  + ++   KY +      
Sbjct: 227 AELKVSKTEILNLLGELQKLKNEIENLENKQSKLKEE-NGKIIEKINHQKKYIAEIEVTI 285

Query: 154 NYGISSVYRSLKMKLTRMRSIY---LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
               + + +    K    + +       L+ + +   L    +S   ++   +   +   
Sbjct: 286 QERDNQIKQGELEKAKIEKELALLAQEELNKKEQIKKLDEENTSIHDEIEKAQQELKNCH 345

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           +   ++ +   ++ K  +   EN+   +  +  I +L ++        L  ++ +L   +
Sbjct: 346 IQSQEIEEFIDLIQKEIISEEENLLTLQKEIVEIEKLIEKER----KTLFSLTTELANKR 401

Query: 271 RTFADEMSKLTILEKTREQKTIL 293
             +      L  ++       + 
Sbjct: 402 NNYQSIKKSLEQVQNRISNIEVR 424



 Score = 36.5 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 79/209 (37%), Gaps = 20/209 (9%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV-- 152
            I    + I+ L   I+  K+    + NK D+ ++A  +++ +L     K +S   ++  
Sbjct: 741 EIQNLSLCIEELEAKIEELKNEQKEILNKNDIHKEAVSNKKIELSTLKEKLNSKKIEIKR 800

Query: 153 FNYGISSV-------YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            N  + ++          ++    R+  I   + +       L   ++S ++     ++L
Sbjct: 801 LNEHLKTISIKKLKNEEEIEQNKKRINQIEYEKAERIKNLENLNLEINSLKEQR---ESL 857

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--- 262
            EK    ++ L + E+   +   EL+        +L     +  E  ++  N   EI   
Sbjct: 858 LEKLQNEKSVLTELEKSYQRLNEELQS----ITALLGEKKTIEGEGKIKLENIWNEIYNL 913

Query: 263 -SRDLEQNQRTFADEMSKLTILEKTREQK 290
              D+ + +     E+ +L I     + +
Sbjct: 914 YGVDIIKEEFETVQEIEQLKIRITQLKNQ 942


>gi|148238493|ref|YP_001223880.1| hypothetical protein SynWH7803_0157 [Synechococcus sp. WH 7803]
 gi|147847032|emb|CAK22583.1| Possible membrane-fusion protein [Synechococcus sp. WH 7803]
          Length = 372

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 9/170 (5%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNM-LRHINELYDEANLEFANYLKEISRDL 266
              V +   +  ER+     + + +N+ +   +         D+ N E   +L +     
Sbjct: 64  DGRVVKVLASDGERVKAGQPILVLDNVQQSAALDSAKAQARTDKLNAERYEFLYQNGAAS 123

Query: 267 EQNQRTFADE----MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
            + +  +  +      +      T   K + SPI G +    S    +Y Q  Q +  IV
Sbjct: 124 AKQRDQYVTQAIASRDQALADAATLGYKYVRSPIDGVVGDLDSVKLGDYVQTGQAITGIV 183

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            ++   +   ++   Q   VK G T  V             +  +  I P
Sbjct: 184 -NNSTLWTLMQIPATQSGAVKIGQTVKVS-SQTDPPITG--EGTVSFISP 229



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 35/80 (43%), Gaps = 4/80 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT----EKSALDFL 120
           G + K    +G ++  G P+L  ++++ +  +D  K   +  + + +      ++     
Sbjct: 65  GRVVKVLASDGERVKAGQPILVLDNVQQSAALDSAKAQARTDKLNAERYEFLYQNGAASA 124

Query: 121 NNKYDVLEKAFESREEQLLD 140
             +   + +A  SR++ L D
Sbjct: 125 KQRDQYVTQAIASRDQALAD 144


>gi|110834218|ref|YP_693077.1| CzcB family heavy metal RND efflux membrane fusion protein
           [Alcanivorax borkumensis SK2]
 gi|110647329|emb|CAL16805.1| heavy metal RND efflux membrane fusion protein,CzcB family
           [Alcanivorax borkumensis SK2]
          Length = 579

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 18/148 (12%)

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A  +  +    K  E  T+ +P  G I    + +         P+ +I   +   ++   
Sbjct: 203 ASLIRSIERQRKPLETWTVTAPHDGVIRSLNARA-GMTLSAGAPVAEIQSLN-PVWVEIA 260

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKF-KAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           V  +Q+  V  G    V         +    +  +  I P++ Q            V ++
Sbjct: 261 VPERQLGQVSSGNAVDVTV----QGVKPALREGQVADILPLVDQSSRT--------VPVR 308

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +T    S++  +LR G  A+V    + T
Sbjct: 309 VT---LSNDEGDLRPGMSAQVRIHGEAT 333


>gi|114563551|ref|YP_751064.1| RND family efflux transporter MFP subunit [Shewanella frigidimarina
           NCIMB 400]
 gi|114334844|gb|ABI72226.1| efflux transporter, RND family, MFP subunit [Shewanella
           frigidimarina NCIMB 400]
          Length = 357

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 7/160 (4%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S  +GII+K  VE G ++ +G  L   +        +  +  ++     I  E + L+
Sbjct: 68  VMSRIAGIIEKINVEEGDRVTKGQILAVIDAKRQRYDFNRSEAEVQI----IQQELNRLN 123

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL---TRMRSIY 175
            +NNK  + +      E  L     +      +V    I+S    +       T   +  
Sbjct: 124 KMNNKEFISQDQMAKLEFNLQAAKAQRDLAELQVKESQITSPINGVVAARYVKTGNMAKE 183

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
              L        L  +L   ++ L  ++   + + + Q+ 
Sbjct: 184 FQELFYVVNQDQLHGILHLPEQQLASLRVGQQASIIQQHQ 223



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 81/222 (36%), Gaps = 16/222 (7%)

Query: 190 ALLSSHQKDLTMMK--NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           A L + ++   M +   + EK  V + D   + +I+     + +     +      I + 
Sbjct: 58  ATLEAPEESHVMSRIAGIIEKINVEEGDRVTKGQILAVIDAKRQRYDFNRSEAEVQIIQQ 117

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                 +  N        + + +       ++  + E   ++  I SPI G +V  +   
Sbjct: 118 ELNRLNKMNNKEFISQDQMAKLEFNLQAAKAQRDLAELQVKESQITSPING-VVAARYVK 176

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
           + N A++ Q L  +V +    +    +  +Q+  ++ G  A++    +         A +
Sbjct: 177 TGNMAKEFQELFYVV-NQDQLHGILHLPEQQLASLRVGQQASI-IQQHQGSAAHIIDAKV 234

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
            +I PI+  Q         ++V L +      + +  L+ G 
Sbjct: 235 LRISPIVDAQSGT------FKVTLAVP-----NQDATLKAGM 265


>gi|302380208|ref|ZP_07268680.1| efflux transporter, RND family, MFP subunit [Finegoldia magna
           ACS-171-V-Col3]
 gi|302311991|gb|EFK94000.1| efflux transporter, RND family, MFP subunit [Finegoldia magna
           ACS-171-V-Col3]
          Length = 378

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 49/122 (40%), Gaps = 9/122 (7%)

Query: 53  EDNVVEI---KSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
             +V ++   ++   G ++K  V+NG  + +G  L+TF + E    ID  ++ +   +  
Sbjct: 56  TGDVQQVYNNQAY--GEVEKVHVKNGQSVKKGDLLITFVNKEVEKQIDQMQMQLDQAKSQ 113

Query: 110 ----IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
               ++   +A    N   +   ++F    E  +D +    +  ++ +   +  V    K
Sbjct: 114 AGYALEDRNNAYKSYNKLVEKYNESFSPELEMQIDQMEPSLNQSNRAYKQALDQVELQKK 173

Query: 166 MK 167
             
Sbjct: 174 QL 175


>gi|302188456|ref|ZP_07265129.1| secretion protein HlyD [Pseudomonas syringae pv. syringae 642]
          Length = 385

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 98/295 (33%), Gaps = 22/295 (7%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +  + L    +     + V   G+    + + +       +   +++L +K   ++    
Sbjct: 31  KPPEYLTAKVERTDIENSVLASGVLQGIKQVDVGAQVSGQLKSLKVNLGDK---VKQGQW 87

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             + D  +++N   ++ V++ +L  Q+        + +      K +    ++   + + 
Sbjct: 88  LAEIDPVVLQNTLRQSQVNEQNLIAQKDAAVAQLKDAKAIYQRYKQL--RADDAISQKDF 145

Query: 254 EFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           + A    E+   +L   +    D   ++           I++PI+G +V           
Sbjct: 146 DTAQSDFEVRSANLRSLEAQVRDARIQIETARINLGYTRIVAPISGDVVGI-VTQEGQTV 204

Query: 313 QQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD---IREKKFKAII 367
             SQ  P++  +       ++A+V+   + H+  G    V F    D       K K   
Sbjct: 205 IASQLTPVILKLADLDTMTVKAQVSEADVIHITPGQ--EVYFTILGDAEKRYYAKLKGTE 262

Query: 368 EKIDPIISQQDNNLQTQE---YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 +  Q  N        +Y  +  +      + +  LR    A+V    + 
Sbjct: 263 PAPQNFLDAQSGNASKPNSAVFYNALFDVP-----NPDHRLRISMTAQVHIVREK 312



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 75/191 (39%), Gaps = 14/191 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV +SG +     V ++ +  SG +K  +V  G ++ QG  L   + +   + +   
Sbjct: 45  IENSVLASGVLQGIKQV-DVGAQVSGQLKSLKVNLGDKVKQGQWLAEIDPVVLQNTLRQS 103

Query: 100 KVSIKNLRCHIDTEKSAL----------DFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +V+ +NL    D   + L            L     + +K F++ +           S  
Sbjct: 104 QVNEQNLIAQKDAAVAQLKDAKAIYQRYKQLRADDAISQKDFDTAQSDFEVRSANLRSLE 163

Query: 150 SKVFNYGISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           ++V +  I      + +  TR+    S  +  +  +   +++ + L+     L  +  + 
Sbjct: 164 AQVRDARIQIETARINLGYTRIVAPISGDVVGIVTQEGQTVIASQLTPVILKLADLDTMT 223

Query: 207 EKNAVSQNDLN 217
            K  VS+ D+ 
Sbjct: 224 VKAQVSEADVI 234


>gi|301163371|emb|CBW22921.1| putative membrane protein [Bacteroides fragilis 638R]
          Length = 416

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 104/314 (33%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE-EQLLDFLGKYHSTCSK 151
           ++ I + +V       ++D E      L  K +  E     R   +    L K  +  + 
Sbjct: 45  SENIQIAEVKDDKFMEYVDVEGLIQPILTIKVNTREAGSVERIIAEEGSLLQKGDTILTL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + S+         +  +     +++E KS  L+        +L  +K        
Sbjct: 105 SNPDLLRSIEDQRDDWEKQRITYQEKEIEMEQKSLSLKQQTLETNYELARLK-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        + +  + E +   +  N       L   + +  I +DL   + 
Sbjct: 157 -KSFTLDKEEFRMGIKSKAQLEVSEDEYNYKVKNAELQREGLRHDSAVSIIRKDL--IRT 213

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  K     +      + +PI+G + + +  +       S+ + +I        I 
Sbjct: 214 DMERERKKYERATERLGNLVVKAPISGQLSFVKV-TPGQQVGSSESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPI-ISQQDNNLQTQE 385
             ++   I  +  G  ATV +    Y     K    + ++   +D +   +  +N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATVNYQGKKYPLRITKVVPEVKDRMFDVDLVFTGEMPDNVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEQA 345


>gi|298369533|ref|ZP_06980850.1| multidrug efflux periplasmic linker protein BpeA [Neisseria sp.
           oral taxon 014 str. F0314]
 gi|298282090|gb|EFI23578.1| multidrug efflux periplasmic linker protein BpeA [Neisseria sp.
           oral taxon 014 str. F0314]
          Length = 404

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 2/103 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GIIKK   + GS +  G PL   +D      ++  +  +      +   K+  D
Sbjct: 58  VRAQVGGIIKKRLFQEGSYVKAGQPLYQLDDATYVASLESARAQLATAEASLA--KANAD 115

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
               K  V   A   ++        +      K     I S  
Sbjct: 116 LTRYKPLVAADAISKQDYDAAVASKRSGEASVKSAKAAIKSAQ 158


>gi|240137613|ref|YP_002962084.1| Multidrug resistance efflux pump [Methylobacterium extorquens AM1]
 gi|240007581|gb|ACS38807.1| Multidrug resistance efflux pump [Methylobacterium extorquens AM1]
          Length = 388

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 106/314 (33%), Gaps = 18/314 (5%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + +   I N R     E      L    + L KA +++  QL     +  +         
Sbjct: 44  EAEIFQITNDRIARTAEAQLDADLGAALERL-KALDAQIGQLAALKKELAARLGDYQKAS 102

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL-------LSSHQKDLTMMKNLFEKN 209
           + S+ + + ++  R+ +   NR+  E   S  + L        SS +           + 
Sbjct: 103 LQSIQQEIIIRQQRISTAQANRVSAEADLSRKQTLGATGVVANSSVEAARAAAVASGNEG 162

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +++ +L++  + +    L+    + E +N + +  +  DE  ++FAN   E    +E+ 
Sbjct: 163 TIAKAELDRLNQQL--DALKRGTFVGEGRNDVPYSQQRGDEVTIQFANV--EAQAKIERA 218

Query: 270 QRTFAD-EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
           +    + ++             +I  P  G I  N     SN       L +++   +  
Sbjct: 219 RVKLLEKQLFIERNRNDRLSSASIRLPFRGVIWRNNVVGGSNVI-VGNELTRLL-DCRDL 276

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK---AIIEKIDPIISQQDNNLQTQE 385
           ++   +       +K G  A VR    +D+   +          ++ +           +
Sbjct: 277 FVDILLDEVDYDQIKPGDPAEVRLLGTSDVIAGRVNSVRGSSAAVEEVTLAAIPPKSRGK 336

Query: 386 YYEVILKITDLAFS 399
              + L +   A  
Sbjct: 337 NARIRLILDQNAMQ 350


>gi|217976430|ref|YP_002360577.1| secretion protein HlyD family protein [Methylocella silvestris BL2]
 gi|217501806|gb|ACK49215.1| secretion protein HlyD family protein [Methylocella silvestris BL2]
          Length = 321

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 66/186 (35%), Gaps = 3/186 (1%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
           + M    I+G+I  +  +  + +   V+ + +   + ++V +    +G I    + +   
Sbjct: 3   RWMRFALIVGVIAAVFLAYEV-VTSYVAYTADAFVQSDLVAVAPEITGRIVAVHIVDNQT 61

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L+  + +     +D ++   +  R  +  +K  +   N+       A      +
Sbjct: 62  VKTGDLLVEIDPVPFKLDVDQRQALAEEARAQVQIDKDRIAAANDAVTSATSALAL--AR 119

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L         + + V    +     +L        S   +     + +++ +A L   + 
Sbjct: 120 LTQQRASTLMSAADVSQAAVDRANDALSRAEANAASAQSDVAATLSTAAMHQASLRKAEA 179

Query: 198 DLTMMK 203
           DL + +
Sbjct: 180 DLAIAQ 185



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 50/148 (33%), Gaps = 5/148 (3%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           +LD++ + +L     +  Q D   +         S        R+  +    L       
Sbjct: 77  KLDVDQRQALAEEARAQVQIDKDRIAA-ANDAVTSATSALALARLTQQRASTLMSAADVS 135

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQN---QRTFADEMSKLTILEKTREQKTILS 294
           +  +   N+    A    A+   +++  L      Q +     + L I +   ++  I++
Sbjct: 136 QAAVDRANDALSRAEANAASAQSDVAATLSTAAMHQASLRKAEADLAIAQWRLDRTKIVA 195

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           P+ G I         +    + PL+ IV
Sbjct: 196 PLDGAINNLTVR-VGDTGTVNVPLIGIV 222


>gi|194767157|ref|XP_001965685.1| GF22627 [Drosophila ananassae]
 gi|190619676|gb|EDV35200.1| GF22627 [Drosophila ananassae]
          Length = 1385

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/139 (11%), Positives = 41/139 (29%), Gaps = 8/139 (5%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
                  Q       +     +     ++ +    + +    R       D + K   L+
Sbjct: 640 VLPQPTRQAQQERAAFEDQQRQAERRRVAELEARQRAEADAQRE-----RDRQEKMRQLQ 694

Query: 190 ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY- 248
                +++   + + L E+  + +    +  RI  +   +LR+    Q+   R   +   
Sbjct: 695 EAEELNRRQQELQRQLKEQQELEKQRRLELARIKAEKEEQLRQERLRQEREQREKEQREK 754

Query: 249 --DEANLEFANYLKEISRD 265
              E  L       E++  
Sbjct: 755 ELREMQLRREKRQTELTFQ 773



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 44/138 (31%), Gaps = 10/138 (7%)

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     +     +   +    +  R +     R R+    + + + +  +         +
Sbjct: 641 LPQPTRQAQQERAAFEDQQRQAERRRVAELEARQRAEADAQRERDRQEKM---------R 691

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            L   + L  +    Q  L +Q+ +  +  LEL     E++  LR      +    E   
Sbjct: 692 QLQEAEELNRRQQELQRQLKEQQELEKQRRLELARIKAEKEEQLRQERLRQEREQREKEQ 751

Query: 258 YLKEISR-DLEQNQRTFA 274
             KE+    L + +R   
Sbjct: 752 REKELREMQLRREKRQTE 769



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 59/180 (32%), Gaps = 6/180 (3%)

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           L     +      AFE ++ Q             +          R  KM+  +  +  L
Sbjct: 641 LPQPTRQAQQERAAFEDQQRQAERRRVAELEARQRAEADAQRERDRQEKMRQLQ-EAEEL 699

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV---YKSTLELREN 233
           NR   E +  L        Q+ L + +   EK    + +  +QER      +   ELRE 
Sbjct: 700 NRRQQELQRQLKEQQELEKQRRLELARIKAEKEEQLRQERLRQEREQREKEQREKELREM 759

Query: 234 IHEQKNMLRHIN-ELYDEANLEFANYLKEISRDLEQNQRT-FADEMSKLTILEKTREQKT 291
              ++     +  + YDE        +      L++   + + D +  L      +E++ 
Sbjct: 760 QLRREKRQTELTFQYYDELLKGDIEKVCRQELSLQKAVNSCYLDLVDSLIAEMAEKERQQ 819


>gi|163850566|ref|YP_001638609.1| hypothetical protein Mext_1134 [Methylobacterium extorquens PA1]
 gi|163662171|gb|ABY29538.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
          Length = 411

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 88/293 (30%), Gaps = 23/293 (7%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E   ++     L+ L    +   ++         R    +   ++SI    +  + + S 
Sbjct: 83  EAQLDADLGAALERLKALDAQIGQLAALKKELAARLGDYQKASLQSIQQEIIIRQQRIST 142

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A   S + DL+  + L     V+ + +         S  E      E   + + ++ L
Sbjct: 143 AQANRVSAEADLSRKQTLGATGVVANSSVEAARAAAVASGNEGTIAKAELDRLNQQLDAL 202

Query: 248 YD-----EANLEF---ANYLKEISRDLEQNQRTFADEMSKLTILE----------KTREQ 289
                  E   +         E++  L   +     E +++ +LE               
Sbjct: 203 KRGTFVGEGRNDVPYSQQRGDEVTIQLANVEAQAKIERARVKLLEKQLFIERNRNDRLSS 262

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            +I  P  G I  N     SN       L +++   +  ++   +       +K G  A 
Sbjct: 263 ASIRLPFRGVIWRNNVVGGSNVI-VGNELTRLL-DCRDLFVDILLDEVDYDQIKPGDPAE 320

Query: 350 VRFPHYADIREKKFK---AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           VR    +D+   +          ++ +           +   + L +   A  
Sbjct: 321 VRLLGTSDVIAGRVNSVRGSSAAVEEVTLAAIPPKSRGKNARIRLILDQNAMQ 373


>gi|149204638|ref|ZP_01881603.1| Secretion protein HlyD family [Roseovarius sp. TM1035]
 gi|149141897|gb|EDM29947.1| Secretion protein HlyD family [Roseovarius sp. TM1035]
          Length = 365

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 57/195 (29%), Gaps = 14/195 (7%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKE 261
            + +  AV++ D    ER +  +  +L   +                 E  L      + 
Sbjct: 78  RMTQGEAVARLDPADIEREITAAEAKLAAALARLDATDAEFQRQRTLFERGLVARAGFER 137

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
           IS DL           + L       ++ T+ +P  G +    +      A   QP+ + 
Sbjct: 138 ISADLSAALADRRVAETDLAAARDRLDRITLRAPREGVVTALLANRFEELA-AGQPVYE- 195

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
           V  +             +  +  G    VR P + D     F A + +I           
Sbjct: 196 VAVTAALQAEVLAPEALLAVIAPGTPVAVRLPAFPDQ---SFAAEVTEIAADAEAGVA-- 250

Query: 382 QTQEYYEVILKITDL 396
                Y V  ++ D 
Sbjct: 251 -----YRVKARLADP 260


>gi|116624595|ref|YP_826751.1| RND family efflux transporter MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116227757|gb|ABJ86466.1| efflux transporter, RND family, MFP subunit [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 407

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 59/149 (39%), Gaps = 3/149 (2%)

Query: 35  SILL-PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           +++  P++  +   GEI    +V EI +  +G +++  V+ GS + +G PL T +  E  
Sbjct: 76  AVVAKPLDRKLPLPGEISPYQDV-EIHAKIAGFVERVLVDRGSAVKKGEPLATLDAPELK 134

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                 +  ++ ++      ++ L      YD L KA  +    +               
Sbjct: 135 TQRAEAQSKVQAMQAQRAEAEARLVGEQGTYDHL-KAASATPGVIAGIDLIVAEKRVDAA 193

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
              +++V   +    + ++ I   +  LE
Sbjct: 194 RAQVTAVEAGINAAQSAVKVIEDMQQYLE 222



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/209 (10%), Positives = 62/209 (29%), Gaps = 18/209 (8%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI- 262
            L  + A +Q+ +   +    ++   L        ++          A ++     K + 
Sbjct: 132 ELKTQRAEAQSKVQAMQAQRAEAEARLVGEQGTYDHLKAASATPGVIAGIDLIVAEKRVD 191

Query: 263 --SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
                +   +       S + ++E  ++   + +P  G I      S       +   + 
Sbjct: 192 AARAQVTAVEAGINAAQSAVKVIEDMQQYLELTAPFDGVITERGV-SPGALVGPNSKSLF 250

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
            +  +    +   V    +  +  G   T   P Y     ++F   I ++   +  +  +
Sbjct: 251 RLEQNSRLRLVVAVPEPDVSGIAAGAHVTFTVPAYP---GQQFTGTIARVAHSVDVKTRS 307

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +             +L   + + +L  G 
Sbjct: 308 M-----------PVELDVDNAHRQLSPGM 325


>gi|78224691|ref|YP_386438.1| secretion protein HlyD [Geobacter metallireducens GS-15]
 gi|78195946|gb|ABB33713.1| Secretion protein HlyD [Geobacter metallireducens GS-15]
          Length = 424

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 95/307 (30%), Gaps = 51/307 (16%)

Query: 112 TEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            +++ +     +   L  A  +  + E   D +       S       +S+   +     
Sbjct: 81  QKQNGVAVAPAQKQRLAGAISATGKVEANADRIAHVSPRISGKIVSVRASLGDGVAAGQP 140

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            +    +   +  N+    +  L+  Q ++  +K L EK   ++ D+ Q E     +  E
Sbjct: 141 LVTLDSVELGEALNRYHQSKTRLALAQSNMDRIKALVEKKIAARKDILQAETDYKMAQTE 200

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L  +                                 E+    +    S L      +  
Sbjct: 201 LHTD---------------------------------EERLSLYGVSTSDLGKANHRKPL 227

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + SPI G I    +      A  S+ L   V      ++   +  K +  + +G TA 
Sbjct: 228 LPVRSPIGGIITEKHAI-VGELADPSKSL-YTVADLSSVWVMVDINEKDLVKIHRGQTAA 285

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           V    + D++    K  I  I  ++ +    +      +  +++     ++   +L+   
Sbjct: 286 VTVSAFPDLK---LKGRITYIADLVDESTRTV------KARVEV-----ANPGRKLKPEM 331

Query: 410 PAEVLFT 416
            A +  T
Sbjct: 332 FATIELT 338



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 2/121 (1%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            +  ++S++G++    + +   SP  SG I   +   G  +  G PL+T + +E  + ++
Sbjct: 95  RLAGAISATGKVEANADRIAHVSPRISGKIVSVRASLGDGVAAGQPLVTLDSVELGEALN 154

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
               S   L     +    +  L  K     K     E        + H+   ++  YG+
Sbjct: 155 RYHQSKTRL-ALAQSNMDRIKALVEKKIAARKDILQAETDYKMAQTELHTDEERLSLYGV 213

Query: 158 S 158
           S
Sbjct: 214 S 214


>gi|28199286|ref|NP_779600.1| membrane fusion protein precursor [Xylella fastidiosa Temecula1]
 gi|182682013|ref|YP_001830173.1| RND family efflux transporter MFP subunit [Xylella fastidiosa M23]
 gi|28057392|gb|AAO29249.1| membrane fusion protein precursor [Xylella fastidiosa Temecula1]
 gi|182632123|gb|ACB92899.1| efflux transporter, RND family, MFP subunit [Xylella fastidiosa
           M23]
 gi|307578276|gb|ADN62245.1| RND family efflux transporter MFP subunit [Xylella fastidiosa
           subsp. fastidiosa GB514]
          Length = 411

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 43/135 (31%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            ++ G +    N V I    SG +       G  + +G  L   +        D    + 
Sbjct: 63  AAAPGTV-AAMNTVTINPQVSGQLISLHFREGESVKKGQLLAEIDARALQASYDQAAAAK 121

Query: 104 KNLRCHIDTEKS---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T ++       L  +  V +   +++  Q+  +     +  + +    +   
Sbjct: 122 RQNQALLATARANYTRSSTLEYQPYVAKTELDTQHNQVTQYEAAVAANEAAMRAAQVQLQ 181

Query: 161 YRSLKMKLTRMRSIY 175
           Y  +   +  +  I 
Sbjct: 182 YTKIVAPIDGVAGIR 196


>gi|219666181|ref|YP_002456616.1| hypothetical protein Dhaf_0111 [Desulfitobacterium hafniense DCB-2]
 gi|219536441|gb|ACL18180.1| hypothetical protein Dhaf_0111 [Desulfitobacterium hafniense DCB-2]
          Length = 312

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 42/116 (36%)

Query: 32  ITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIE 91
           + W +L  I   +   G +LN   V  ++   SG I   +V+ G ++ QG  +   E  E
Sbjct: 46  VVWGLLGSIPTKIQGQGILLNNGGVFSLQHHASGQISDIRVKVGQEVRQGDVIARIEQPE 105

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
               I     S   +       + AL  +  +   L      + + + +  G+   
Sbjct: 106 LVAQIKGLLGSQAAMDKDGQGGEPALAGIEEQIRQLRSELVYQTQVVSEVDGRILE 161



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/159 (10%), Positives = 49/159 (30%), Gaps = 8/159 (5%)

Query: 219 QERIVYKSTLELRENIHE---QKNMLRHINELYDEANLE-FANYLKEISRDLEQNQRTFA 274
            +        ++R  + +   Q +++  I +    A ++        + +D +  +   A
Sbjct: 73  LQHHASGQISDIRVKVGQEVRQGDVIARIEQPELVAQIKGLLGSQAAMDKDGQGGEPALA 132

Query: 275 DEMSKLTILEKTRE-QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRA- 332
               ++  L      Q  ++S + G I+     S  +  +    L  +  +     + A 
Sbjct: 133 GIEEQIRQLRSELVYQTQVVSEVDGRILELNI-SKGSIVKPGDTLATLEQYGDTVKLEAI 191

Query: 333 -KVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
             V  +Q   ++ G    +                +  +
Sbjct: 192 VYVPAEQGGLLRPGMECQISPTTVNKEEYGYLLGRVNTV 230


>gi|325143894|gb|EGC66206.1| chromosome segregation protein SMC [Neisseria meningitidis
           M01-240013]
          Length = 1161

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +++    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQMQRIHQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|323349112|gb|EGA83343.1| Spc110p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 843

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 73/204 (35%), Gaps = 21/204 (10%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +  +  +  +  L   + T K  +  L N  DV      S+E++L + + + +   S   
Sbjct: 227 EEREQMERKLAELERKLKTVKDQVLELENNSDVQSLKLRSKEDELKNLMNELNELKSNAE 286

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                     L+ K   +R       +L+ KS  +   L   Q +   +K+         
Sbjct: 287 EKDT-----QLEFKKNELRKRTNELNELKIKSDEMDLQLKQKQNESKRLKD--------- 332

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------YLKEISRDLE 267
            +LN+ E    ++  +     +E K +   I EL +E + + +        L  +   L 
Sbjct: 333 -ELNELETKFSENGSQSSAKENELKMLKNKIAELEEEISTKNSQLIAKEGKLASLMAQLT 391

Query: 268 QNQRTFADEMSKLTILEKTREQKT 291
           Q +       S+L   E+  ++  
Sbjct: 392 QLESKLNQRDSQLGSREEELKKTN 415



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 82/198 (41%), Gaps = 7/198 (3%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           + I   K  IK LR   +   +  D L  + D L+   ++ E++L       +S      
Sbjct: 163 NEIKSLKHEIKELRKEKNDTLNNYDTLEEETDDLKNRLQALEKELDAKNKIVNSRKVDDH 222

Query: 154 N---YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +        + R L     +++++    L+LEN S +    L S + +L   KNL  +  
Sbjct: 223 SGCIEEREQMERKLAELERKLKTVKDQVLELENNSDVQSLKLRSKEDEL---KNLMNELN 279

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +++  +++  +     ELR+  +E   +    +E+  +   +  N  K +  +L + +
Sbjct: 280 ELKSNAEEKDTQLEFKKNELRKRTNELNELKIKSDEMDLQLKQK-QNESKRLKDELNELE 338

Query: 271 RTFADEMSKLTILEKTRE 288
             F++  S+ +  E   +
Sbjct: 339 TKFSENGSQSSAKENELK 356


>gi|307197892|gb|EFN78991.1| Kinesin-like protein KIF20A [Harpegnathos saltator]
          Length = 1403

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 70/202 (34%), Gaps = 1/202 (0%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +    +   K +I+     ++T +  LD   ++Y V +        ++ +      +   
Sbjct: 971  QLEKNLATAKDNIQQYMEQLETMRKKLDECTSQYKVEKDEKSIESARVKEENDDTTNDIK 1030

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +  +       + L   L  + +       L+     L   L   Q +   M+N  E+N 
Sbjct: 1031 EENDTTNDINVKQLDEHLKEIETNLETIAKLKGDIVQLNKNLEVCQIERDRMQNALEQNK 1090

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +   L + E  + ++ L+ +E   E   + + +  L  E+     N    +  +L+   
Sbjct: 1091 QNTQRLLELENQLKQTALKEQEKDTEIATLQKELKRLIQESENSQKNDDC-METELKSAI 1149

Query: 271  RTFADEMSKLTILEKTREQKTI 292
                     L+  E+  ++  I
Sbjct: 1150 SELTLTKETLSEKEQYIKELKI 1171



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 76/196 (38%), Gaps = 9/196 (4%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE---QLLDFLGK 144
            + ++    +++ ++    ++  ++  K     L    + L++     +E   ++     +
Sbjct: 1064 DIVQLNKNLEVCQIERDRMQNALEQNKQNTQRLLELENQLKQTALKEQEKDTEIATLQKE 1123

Query: 145  YHSTCSKVFNYGISS--VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                  +  N   +   +   LK  ++ +        + E     L+  L + +++  + 
Sbjct: 1124 LKRLIQESENSQKNDDCMETELKSAISELTLTKETLSEKEQYIKELKIHLDNFERNAKIY 1183

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
             +L E+NA  +   N++ R +     ELR ++ +++  +       DE  +++   +K  
Sbjct: 1184 -DLLEENAKERQAENERLRNIND---ELRSHLTQKEREMDAFVRNRDETMMKYEELVKNQ 1239

Query: 263  SRDLEQNQRTFADEMS 278
              +LE+ ++       
Sbjct: 1240 QEELEKQKKEVTRYQE 1255


>gi|297528718|ref|YP_003669993.1| efflux transporter RND family, MFP subunit [Geobacillus sp. C56-T3]
 gi|297251970|gb|ADI25416.1| efflux transporter, RND family, MFP subunit [Geobacillus sp.
           C56-T3]
          Length = 382

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 84/228 (36%), Gaps = 23/228 (10%)

Query: 17  LKRMTLLSIIGIIGLITWSILL-------------PIEISVSSSGEILNEDNVVEIKSPF 63
           +    +  I  ++G+  +                  +  +++++G +  ++     K P 
Sbjct: 9   IGVSVIAIIFLLVGVNVYIAFAGKPTVKTTTLQQRDLSKTITTNGTVELKNVYKVYKDPQ 68

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I +  V    ++ +G PLL + + +    I    + IK+    ID        L  K
Sbjct: 69  LGNISEVLVNENQEVKKGDPLLKYSNQQLILEIQQNNIDIKSAYIKIDDLNKKEKRLREK 128

Query: 124 Y-DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR---- 178
             ++ EK    + ++ L        T  +  N  +S   +   +   +  ++ +      
Sbjct: 129 LKELKEKNASDQVKENLQEQLDSIDTEKETANLNLSYALKKKDILQKQENNLIVKSKITG 188

Query: 179 --LDLENKSSLLRALLSSHQKDLTMMKNLFE---KNAVSQNDLNQQER 221
             +D+ + +S      +   + + ++ +L +   K  +S+ D  Q ++
Sbjct: 189 TVIDVNDPNSQNYTQENLEPEPIIIIGDLNKLIVKGYISEYDSLQVQK 236



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 93/250 (37%), Gaps = 35/250 (14%)

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           K S  + +L   Q ++ +     +   +  +DLN++E+ + +   EL+E           
Sbjct: 91  KYSNQQLILEIQQNNIDI-----KSAYIKIDDLNKKEKRLREKLKELKEKNAS------- 138

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
                D+        L  I  + E      +  + K  IL+K      + S I GT++  
Sbjct: 139 -----DQVKENLQEQLDSIDTEKETANLNLSYALKKKDILQKQENNLIVKSKITGTVIDV 193

Query: 304 QSFSSSNYAQQS---QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIRE 360
              +S NY Q++   +P++ I+       ++  ++      V+KG   T+          
Sbjct: 194 NDPNSQNYTQENLEPEPII-IIGDLNKLIVKGYISEYDSLQVQKGQKVTL---TSDVSPN 249

Query: 361 KKFKAIIEKIDPI------ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
           K +   I++I  +       +  +NN      Y V ++I       N  +L+ GF   + 
Sbjct: 250 KSWYGKIQQIGYLPVNYNSNNPVNNNDTGTAKYPVFVEI-----VGNTEDLKPGFQLMME 304

Query: 415 FTAKNTTLAQ 424
              +   +  
Sbjct: 305 IKTETKKVFS 314


>gi|294146955|ref|YP_003559621.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292677372|dbj|BAI98889.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 360

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/171 (10%), Positives = 54/171 (31%), Gaps = 7/171 (4%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + +   + +   +  ++++ +  +   L              A      S  ++  + T 
Sbjct: 94  SRIRVGQPLARIAGTDIQQQLASRDAELARATRTLARLEA-LAQSGSVASAAVQDQRDTV 152

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
               +        ++  T++SP +G ++  +           Q ++++  +     IR  
Sbjct: 153 EQARAAAAAARYDQQSATLVSPFSGVVLE-RLSQLGETVGAGQAILRVADYDSPLVIRVP 211

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +  +    +  G  A VRF        +     + K  P++         +
Sbjct: 212 LAERDADGIAIGTPAEVRFEG-----RQALAGRVAKSQPLVDGATGTRMVE 257



 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 1/168 (0%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +        VS+SG    E     +     G+I +  V+ GS+I  G PL      +   
Sbjct: 54  AAPASARQGVSASGTAAYERQS-TLSFRVGGVISRLTVDMGSRIRVGQPLARIAGTDIQQ 112

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +  +   +      +   ++     +     ++   ++ E+         +   S    
Sbjct: 113 QLASRDAELARATRTLARLEALAQSGSVASAAVQDQRDTVEQARAAAAAARYDQQSATLV 172

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
              S V      +L          L + +  S L   +   ++D   +
Sbjct: 173 SPFSGVVLERLSQLGETVGAGQAILRVADYDSPLVIRVPLAERDADGI 220


>gi|271970057|ref|YP_003344253.1| membrane-fusion protein-like protein [Streptosporangium roseum DSM
           43021]
 gi|270513232|gb|ACZ91510.1| Membrane-fusion protein-like protein [Streptosporangium roseum DSM
           43021]
          Length = 598

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 10/131 (7%)

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           +EQ +       + LT   +      I++P  GT++     +  +       L   +   
Sbjct: 387 VEQAEADVKRAEADLTDAREELAGVRIVAPADGTVLSVAG-TVGDSVGTGAFLA--LGDL 443

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
               + A  T   I  +K G  A +     A    +++   + +I P  +  D  ++   
Sbjct: 444 DELQVEALFTESDIGELKLGQRAAITL---ATREGEEYTGTVTRIAPTATTTDRLVR--- 497

Query: 386 YYEVILKITDL 396
            Y V +   + 
Sbjct: 498 -YGVTVAFDEA 507



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 25/87 (28%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + K  V  G ++ +G  L         +     K  +   R  +D    A       
Sbjct: 74  SGTVTKVYVRAGDKVGKGDVLARIGSAPARERYTAAKAQLAAAREALDGAGDAATAQPQT 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCS 150
            +  +   ++R             T S
Sbjct: 134 QEQRQSQEQNRTPDDSARQAACEPTAS 160


>gi|262392754|ref|YP_003284608.1| putative RND efflux membrane fusion protein [Vibrio sp. Ex25]
 gi|262336348|gb|ACY50143.1| probable RND efflux membrane fusion protein [Vibrio sp. Ex25]
          Length = 367

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 55/150 (36%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  +    + +  L+ T +++ I +P  G +V  ++     Y Q       IV     
Sbjct: 141 EAEANYFSLKADIESLKATIDRREIKAPFDG-VVGIRNVYLGQYLQAGT---DIVRLEDT 196

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V    I  +       +    Y    E+ FK  I  I+P ++ Q   +Q Q 
Sbjct: 197 SVMRLRFTVPQTDISRINIDQEVDIFVDAYP---EQPFKGSISAIEPAVNVQSGLIQVQ- 252

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +++ +LR+G  A    
Sbjct: 253 ----------ADIPNSDGKLRSGMFARANI 272



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 46/135 (34%), Gaps = 5/135 (3%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           ++ + G I     V  + +  SG+I K   ++G+Q+  G PL+  +       +   +  
Sbjct: 56  AIEAIGFIEPNQGV-TVANETSGVIDKIAFDSGTQVKAGQPLVLLDSDVEKANLKSSQAK 114

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +          +     L  K  + ++A++  E           S  + +    I + + 
Sbjct: 115 LPAAEAKYKRYQG----LFKKGSISKEAYDEAEANYFSLKADIESLKATIDRREIKAPFD 170

Query: 163 SLKMKLTRMRSIYLN 177
            +          YL 
Sbjct: 171 GVVGIRNVYLGQYLQ 185


>gi|284037251|ref|YP_003387181.1| efflux transporter RND family, MFP subunit [Spirosoma linguale DSM
           74]
 gi|283816544|gb|ADB38382.1| efflux transporter, RND family, MFP subunit [Spirosoma linguale DSM
           74]
          Length = 372

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 48/129 (37%), Gaps = 3/129 (2%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           VEI+   SG I     ++G Q+ +G  L T +  +     D    ++   + +++  +  
Sbjct: 64  VEIQPQVSGNITGIFFQDGQQVRKGQKLYTIDPQQYRAGYDQAVANLNVQKANLNRAQKD 123

Query: 117 LDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            D    L  +  V ++  ++    L     +  +  + +   G +  Y ++   L     
Sbjct: 124 ADRYNTLAQQDAVAKQLVDNANASLEATRMQVEAAQATIRQVGTNLKYTTIYAPLDGTIG 183

Query: 174 IYLNRLDLE 182
           I   RL   
Sbjct: 184 ISQVRLGAA 192



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 47/159 (29%), Gaps = 10/159 (6%)

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           + N++  +      N L  + +      +   +  LE  +       + +  +    +  
Sbjct: 114 KANLNRAQKDADRYNTLAQQ-DAVAKQLVDNANASLEATRMQVEAAQATIRQVGTNLKYT 172

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI-------QHVK 343
           TI +P+ GTI                  +  +          +V   +I           
Sbjct: 173 TIYAPLDGTI-GISQVRLGAAVAPGSTPLNTISSDNPIAADLQVDASEIPRFLKLQSQKS 231

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
            G  +T+      D    K+  ++  +D  +  Q   L+
Sbjct: 232 SGRDSTLVL-AMPDGSTYKYPGVVRIVDRAVDPQTGTLR 269


>gi|225567885|ref|ZP_03776910.1| hypothetical protein CLOHYLEM_03958 [Clostridium hylemonae DSM
           15053]
 gi|225163286|gb|EEG75905.1| hypothetical protein CLOHYLEM_03958 [Clostridium hylemonae DSM
           15053]
          Length = 994

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 80/196 (40%), Gaps = 5/196 (2%)

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI--SS 159
            I+++   +DT ++ LD  N++Y+ ++  +ES EEQ+           S++    +    
Sbjct: 48  QIQSIDGRLDTTRAELDEANSRYEDMKTEYESVEEQVDSIDASVEKAKSQLNETNMLKQQ 107

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           +   + +   ++ S ++N    + ++  + + ++  +K LT +    E      ++  + 
Sbjct: 108 LENQIALLKEQIHSAHMNDEHYDQRAKTIDSEIAEREKQLTELVTEQESIQAELDEKGKL 167

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR---DLEQNQRTFADE 276
           ER+     +E+   I      +    +   E     A+   +I R    LEQ +   +  
Sbjct: 168 ERLARAELIEVETRIATLTASVESNKKDIIELLNSRASTKAKIQRYDTMLEQIEVRKSQM 227

Query: 277 MSKLTILEKTREQKTI 292
             ++   E    ++ +
Sbjct: 228 NKQVIECESEAAKQEV 243



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 55/144 (38%), Gaps = 6/144 (4%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV--- 211
             + S  R ++     +R +     +LE  S  LR   + +   L  +K+  +K  V   
Sbjct: 478 SNLLSRRREIEEFEKTVRQLKREIDELEAASDALRQERTGYYDKLEELKSRLQKAYVIQN 537

Query: 212 -SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            ++ +++Q E  +  +         E   +   I ++ D  N E  N   + S  LE+  
Sbjct: 538 TAKMNVDQAEARIRTARNSASGLKREADELDSQITDIID--NQESINVELDTSESLEKEL 595

Query: 271 RTFADEMSKLTILEKTREQKTILS 294
               ++  K+   E+  E +   +
Sbjct: 596 TDKIEKEQKILEAEREEEGRKQKA 619


>gi|161984960|ref|YP_407395.2| multidrug efflux system subunit MdtA [Shigella boydii Sb227]
 gi|332097168|gb|EGJ02151.1| efflux transporter, RND family, MFP subunit [Shigella boydii
           3594-74]
          Length = 415

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I+   N V ++S   G +     + G Q+  G  L   +  
Sbjct: 64  AATA-VEQAVPRYLTGLGTIIAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 121

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 122 QFKVALAQTQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 177

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 178 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 210



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 122 QFKVALAQTQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 181

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 182 DEASVASAQLQLD 194


>gi|297579331|ref|ZP_06941259.1| HlyD family secretion protein [Vibrio cholerae RC385]
 gi|297536925|gb|EFH75758.1| HlyD family secretion protein [Vibrio cholerae RC385]
          Length = 364

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 55/167 (32%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L + +  +    ++  ++ +KN        K+  +     
Sbjct: 77  SGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYSRAKAIFEKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       G+ S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEEAKRKLEYTQIIAPFDGVISEKTVENFAQVQANQVIMILQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +    +          +   + + E +A+     + + R     
Sbjct: 197 DLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQ 243



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 77/230 (33%), Gaps = 40/230 (17%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + + +    + + +  +   +  L++  + Y  A   F         +L++    + 
Sbjct: 90  QVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYSRAKAIFEKTQAISKAELDKVTNRYD 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              +++   ++  E   I++P  G I      + +   Q +Q +M I+       +  ++
Sbjct: 150 LAKNRVEEAKRKLEYTQIIAPFDGVISEKTVENFAQV-QANQVIM-ILQDLNDLEVAIEI 207

Query: 335 T----------PKQIQHVK--KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                       + I  +         ++   Y                   +Q  ++ Q
Sbjct: 208 PHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTY------------------STQPSSDSQ 249

Query: 383 TQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQEIIH-PIT 431
           T   Y V+L   DL        +  G  A+VL  A N T    +I  P+T
Sbjct: 250 T---YSVVLGFEDL----KGFRVMPGMSAKVLPVADNPTAENTLITLPLT 292


>gi|7209643|dbj|BAA92289.1| myosin heavy chain [Seriola dumerili]
          Length = 1938

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 82/214 (38%), Gaps = 12/214 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLG 143
            +  E+ + ++ K  S++  +  +  E   L    +  N+    L+K   + ++ L ++  
Sbjct: 1403 DAEESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQ 1462

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            KY    +++   G     RSL  +L +M++ Y   LD       ++    + Q++++ + 
Sbjct: 1463 KYEEGQAEL--EGAQKEARSLSTELFKMKNSYEEALD---HLETMKRENKNLQQEISDLT 1517

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                +   S ++L + ++ V     E++  + E +  L H         LE      E+ 
Sbjct: 1518 EQIGETGKSIHELEKAKKTVETEKTEIQSALEEAEGTLEHEEAKILRVQLELNQVKGEVD 1577

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQK---TILS 294
            R L +              +  + +      + S
Sbjct: 1578 RKLAEKDEEMEQIKRNSQRVMDSMQSTLDAEVRS 1611



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 74/229 (32%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1210 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKSKGNLEKMCRTLEDQLSELKAKN 1267

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++                  R L+ K   +  +   +     +   L+  +    
Sbjct: 1268 DENVRQLNDINAHKARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQIEELKRHIEEEV 1327

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1328 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1387

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   + +  +     + E+      + G +     
Sbjct: 1388 EELEEAKKKLAQRLQDAEESIEAVNSKCASLEKTKQR--LQGEVEDLMI 1434



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K+     L   I+ E+S    L  K   L+   
Sbjct: 1060 EGDLKLAQESIMDLENDKQQSDEKIKKKEFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1119

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1120 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATAAQIEMNKKREA---- 1173

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     ++  +   +    S  EL E I   + + + + +   E 
Sbjct: 1174 -----EFQKLRRDLEESTLQHESTASALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1228

Query: 252  NLEFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +    +        +LE+  RT  D++S+L        ++
Sbjct: 1229 KMEIDDLSSNMEAVAKSKGNLEKMCRTLEDQLSELKAKNDENVRQ 1273


>gi|330861248|emb|CBX71498.1| putative macrolide-specific efflux protein macA [Yersinia
           enterocolitica W22703]
          Length = 337

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 75/243 (30%), Gaps = 35/243 (14%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE--QKNMLRHINELYDEANLEFANYLK 260
           + + +   V++ D   Q+  +  +   L+  + +   K   +  N+L  +   +      
Sbjct: 18  QQVEKGQLVAEIDDLTQQNALKDAEEALKNVLAQRAAKEATQKNNQLTYQRQQQILAKGL 77

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQ--------------KTILSPIAGTIVYNQSF 306
            +  D +  + T     +++  L+    Q                I SPI GT+V     
Sbjct: 78  GVRADFDSAKATLESTQAEIKALDAQIAQAEIAVSTAKLNLGYTKITSPINGTVVAIPVE 137

Query: 307 SSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA--------TVRFPHYA 356
                   Q +  ++K V       + A+++   +  VK G             RF    
Sbjct: 138 EGQTVNAVQSAPTIIK-VAQLDTMTVEAQISEADVVKVKAGMPVYFTILGEPEERFSATL 196

Query: 357 DIREKK---FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
              E                 S   ++  T  YY  +  +     ++ N  LR    A+V
Sbjct: 197 RAIEPAPDSINDKTTTTSSSSSSSSSSTTTAIYYNGLFDV-----ANPNGALRISMTAQV 251

Query: 414 LFT 416
              
Sbjct: 252 YIV 254



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 16/129 (12%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG IK   V  G Q+ +G  +   +D+   + +   + ++KN+      +++        
Sbjct: 6   SGQIKALHVTLGQQVEKGQLVAEIDDLTQQNALKDAEEALKNVLAQRAAKEA-------- 57

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                     +  QL     +              S   +L+     ++++       E 
Sbjct: 58  --------TQKNNQLTYQRQQQILAKGLGVRADFDSAKATLESTQAEIKALDAQIAQAEI 109

Query: 184 KSSLLRALL 192
             S  +  L
Sbjct: 110 AVSTAKLNL 118


>gi|294853866|ref|ZP_06794538.1| HlyD family secretion protein [Brucella sp. NVSL 07-0026]
 gi|294819521|gb|EFG36521.1| HlyD family secretion protein [Brucella sp. NVSL 07-0026]
          Length = 360

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 85  RIDDVEQRANMRVAQASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 144

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 145 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 203

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 204 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 251



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 46  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 98

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + S+      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 99  QASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 158

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 159 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 215

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 216 IGMGVTVALLADPSIEAEGNIRELS 240


>gi|217979511|ref|YP_002363658.1| efflux transporter, RND family, MFP subunit [Methylocella
           silvestris BL2]
 gi|217504887|gb|ACK52296.1| efflux transporter, RND family, MFP subunit [Methylocella
           silvestris BL2]
          Length = 389

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 73/196 (37%), Gaps = 6/196 (3%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           I+   N V + S   G I K   + G  +  G  L+  +       +D    ++   +  
Sbjct: 59  IVTAFNTVAVTSRVEGAITKINFKEGQYVRTGDLLIQLDPRPFQAALDQASANLAKDQAT 118

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
           +   K  L    ++Y  L     + E+Q+         T + V +   +     L +   
Sbjct: 119 LANAKVDL----SRYSSLLTHSFAPEQQVATQKTTVQQTEAAVQSDEAAIKAAQLNVDYA 174

Query: 170 RMRSIYLNRLDLE--NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
            +RS       +   +  +L++A    +   +T ++ ++    + + D+++  + + + +
Sbjct: 175 ALRSPIDGVTGIRHVDIGNLIQANNQQNLVTITQIEPIYVIFTLPEVDIDRVRQAMKEGS 234

Query: 228 LELRENIHEQKNMLRH 243
           L++     + K  L  
Sbjct: 235 LKVEAYASDDKRKLSE 250



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 67/188 (35%), Gaps = 14/188 (7%)

Query: 207 EKNAVSQNDLNQQ------ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NY 258
           E   V   DL  Q      +  + +++  L ++     N    ++         FA    
Sbjct: 83  EGQYVRTGDLLIQLDPRPFQAALDQASANLAKDQATLANAKVDLSRYSSLLTHSFAPEQQ 142

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--Q 316
           +      ++Q +     + + +   +   +   + SPI G +   +     N  Q +  Q
Sbjct: 143 VATQKTTVQQTEAAVQSDEAAIKAAQLNVDYAALRSPIDG-VTGIRHVDIGNLIQANNQQ 201

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYT-ATVRFPHYADIREKKF-KAIIEKIDPII 374
            L+ I    +  Y+   +    I  V++     +++   YA   ++K  + +++ ID  +
Sbjct: 202 NLVTIT-QIEPIYVIFTLPEVDIDRVRQAMKEGSLKVEAYASDDKRKLSEGVLDLIDNAV 260

Query: 375 SQQDNNLQ 382
                 ++
Sbjct: 261 DPTTGTVK 268


>gi|73540278|ref|YP_294798.1| secretion protein HlyD [Ralstonia eutropha JMP134]
 gi|72117691|gb|AAZ59954.1| Secretion protein HlyD [Ralstonia eutropha JMP134]
          Length = 498

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 45/124 (36%), Gaps = 3/124 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +++++  G +    NV  +++  SG + K   + G  +  G  L   +        D   
Sbjct: 104 DVTLNGLGNVTPVSNV-TVRAQVSGPLLKVLFKEGQMVKAGDVLAEIDPRPFQAAFDQAV 162

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +   +  +  + + LD    +  + + +  S++    D L + +    K     + + 
Sbjct: 163 GQLARDQALL--QNARLDQKRYRTLLQQDSISSQQVDTQDALVRQYEGVVKTDQGNVDNA 220

Query: 161 YRSL 164
              L
Sbjct: 221 RLQL 224


>gi|326798544|ref|YP_004316363.1| efflux transporter RND family, MFP subunit [Sphingobacterium sp.
           21]
 gi|326549308|gb|ADZ77693.1| efflux transporter, RND family, MFP subunit [Sphingobacterium sp.
           21]
          Length = 380

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 71/213 (33%), Gaps = 13/213 (6%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             VE++S   G + K  V+ G+ +  G  L    D E    +   +  + N      T  
Sbjct: 59  RNVEVRSKIQGFLDKIFVDEGALVQAGQILFKINDDEQRADVSKAQALLNNATADAKTVA 118

Query: 115 SALDFL----------NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             L+ +              DV +   ++ E ++ +         +++    I + +   
Sbjct: 119 LELERVKTLVKKNIITKTDLDVAQAQLKAAEARVQEARSDLQRAQTQLGYTSIRAPFTGR 178

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ-KDLTMMKNLFEKNAVSQNDLNQQERIV 223
             ++       L+   L    S L  + +     +   ++N+  K+   +N +  +E  +
Sbjct: 179 IDRIPLKVGSLLSEGALLTSVSDLDEVYAYFTISETEYLQNIARKS--PENSILSKEVRL 236

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             +  +   ++ + +       E     +L   
Sbjct: 237 TLADGQHYPHMGKIELAESEFEEQTGTISLRAR 269


>gi|317419273|emb|CBN81310.1| Myosin phosphatase Rho-interacting protein [Dicentrarchus labrax]
          Length = 1595

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 78/222 (35%), Gaps = 12/222 (5%)

Query: 81  GTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL-L 139
           G      + ++  + +  +++     R     E   L          ++    R   L  
Sbjct: 721 GQKQKELDRLQKQNNVLKEQLENALGREQSAREGYVLQSATAPSSSPQRVPWQRLHTLNQ 780

Query: 140 DFLGKYHSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           D  G+  +   K  +    I ++ RS       +     +   L+ K +   A + + ++
Sbjct: 781 DLQGELEAQKRKQDLAQQQIRTLKRSYTEAQDAVDRHETDIQALQTKLASAMAEILASEQ 840

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL---- 253
            +  M+N  +   + Q    +QE    +S   LR  + + ++ LR +     E N     
Sbjct: 841 AVARMRNELK---LEQERSKEQEEEHGRSETTLRAQLKDSEDRLREVEANLLERNQALRH 897

Query: 254 --EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                   ++  R++++ Q    +  ++L+  E+ +  K   
Sbjct: 898 LERQQALQRDHMREIQRLQERLQEVTARLSATEEGQALKEER 939



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 71/196 (36%), Gaps = 3/196 (1%)

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            +  ++  +   D  +  +  L   Y   + A +  E  +     K  S  +++     +
Sbjct: 782 LQGELEAQKRKQDLAQQQIRTLKRSYTEAQDAVDRHETDIQALQTKLASAMAEILASEQA 841

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLN 217
                 ++KL + RS         +++  LRA L   +  L  ++ NL E+N  +   L 
Sbjct: 842 VARMRNELKLEQERSKEQEEEHGRSET-TLRAQLKDSEDRLREVEANLLERNQ-ALRHLE 899

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           +Q+ +      E++      + +   ++   +   L+     KE     E ++R   +  
Sbjct: 900 RQQALQRDHMREIQRLQERLQEVTARLSATEEGQALKEERLRKEKHSMQESHERERQNLC 959

Query: 278 SKLTILEKTREQKTIL 293
            +L   E  + +    
Sbjct: 960 RRLAEAETAQREVENR 975



 Score = 43.5 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 72/216 (33%), Gaps = 17/216 (7%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +      +   +  ++ +  ++     AL  L  +   L++      ++L + L +  +
Sbjct: 866  SETTLRAQLKDSEDRLREVEANLLERNQALRHL-ERQQALQRDHMREIQRLQERLQEVTA 924

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL--------ENKSSLLRALLSSHQKDL 199
              S           R  K K +   S    R +L          +  +   LL + Q+  
Sbjct: 925  RLSATEEGQALKEERLRKEKHSMQESHERERQNLCRRLAEAETAQREVENRLLEAEQQVE 984

Query: 200  TMMKNLFEKNAVS-QNDLNQQERIV---YKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             +++      +   + ++ + +  +         LRE++   +    H+     E   + 
Sbjct: 985  ALLRGRQASGSKECREEMLKLQEELDHKTDMVESLRESVRRLEEEKGHLTCRCQELINQI 1044

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            A   +E+     + +     E +    LE + E+ T
Sbjct: 1045 AEADREV----NKLRNRLETEEADYNTLEHSYERAT 1076



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 66/170 (38%), Gaps = 8/170 (4%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            + I      +  LR  ++TE++  + L + Y+   + F+   + L +   +   T  +++
Sbjct: 1042 NQIAEADREVNKLRNRLETEEADYNTLEHSYERATQEFQKMSQFLREKEEEIRQT-KEMY 1100

Query: 154  NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-------TMMKNLF 206
               +      LK  L +M ++  +  + E K      LL    + L       +  K+L 
Sbjct: 1101 ERLVERKEDDLKEALVKMTALGNSLEETEQKLQAKEELLCQMSQSLLDKVEPCSAEKDLQ 1160

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             K  V+++ + + E+ +    L   +   E+K       +   + +   +
Sbjct: 1161 AKLVVAEDRIAELEQHLNALQLGYADLRLERKQNPEQSKKGRLKTSASLS 1210


>gi|301762800|ref|XP_002916827.1| PREDICTED: liprin-alpha-2-like, partial [Ailuropoda melanoleuca]
          Length = 1225

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 24/226 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L +  K   + +R  +      +  L  +     +   +  EQ +    K  S+    
Sbjct: 146 KSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGST 205

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF------ 206
            +  +  +    K+   R+ +  ++  D  ++   L+ LL     ++  MK         
Sbjct: 206 ESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQNYEMAQMKERLAALSSR 265

Query: 207 -----EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL-------------Y 248
                ++   ++ DL + E +  K   ++RE + ++++M   I  L              
Sbjct: 266 VGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSI 325

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + N +  N L      L Q +        +L + E+  +Q    +
Sbjct: 326 HDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKA 371



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 80/219 (36%), Gaps = 19/219 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E  +L++ +   +  ++  +    S +  +  + +   K     EE    +        
Sbjct: 239 VELQELLEKQNYEMAQMKERLAALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAM 298

Query: 150 SKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++       I+++ +          SI+     LEN+ +   A+L   ++     + L E
Sbjct: 299 AQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEK---NRQLQE 355

Query: 208 KNAVSQNDLNQQER---IVYKSTLELRENIHE----------QKNMLRHINELYDEANLE 254
           +  +++  L Q  R    + +   EL + I             +  +RH+    +E N E
Sbjct: 356 RLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEEKNQE 415

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                ++  +  E++ +  +D + +L      R Q  + 
Sbjct: 416 L-QRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLK 453


>gi|301755689|ref|XP_002913698.1| PREDICTED: laminin subunit beta-4-like [Ailuropoda melanoleuca]
          Length = 1673

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 81/215 (37%), Gaps = 12/215 (5%)

Query: 68   KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +K  V+          LL  +      L  L++V +   R +    +   +    K +VL
Sbjct: 1462 QKVLVKAKDAEKAANVLLNLDKT----LNKLQQVQVTQGRVNSTITQLTAEITKIKKNVL 1517

Query: 128  EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK---LTRMRSIYLNRLDLENK 184
            +   E+++ +    L K  S      +   + + R+ +     + +  S       LE +
Sbjct: 1518 QAENEAKDAKNELDLAKQRSVLEDGLSQLQTKLQRNREQATHVMAQAASAQRQAGGLEQE 1577

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             + L+   ++ Q+  +    L +   V+   + Q +    K   +  + I    ++ + I
Sbjct: 1578 FAELKNQYAALQQKTSAT-GLTK---VTLEKVEQLKDAAEKLATDTEDKIRRIADLEKKI 1633

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
             +L+  +  E AN LK +   +   +    ++ +K
Sbjct: 1634 QDLHL-SRQEKANQLKRLEDQVVAIKNEIVEQENK 1667


>gi|152981912|ref|YP_001352100.1| cation efflux protein [Janthinobacterium sp. Marseille]
 gi|151281989|gb|ABR90399.1| cation efflux protein [Janthinobacterium sp. Marseille]
          Length = 383

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 90/288 (31%), Gaps = 54/288 (18%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK------LTRMRSIYLNRLDLENKSSL 187
           R   L+DF  +  +         I+ +  +L         L R+ S  L    L    + 
Sbjct: 66  RVPGLIDFDRQRMARIGAPVTGRITDISANLGQSVKPGDVLARLHSTELGSAQLAYLKA- 124

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            RA     Q + T  + LF  + + + +L ++E     +  E R    + K +      +
Sbjct: 125 -RAQAELQQNNQTRARQLFAADVIGKAELQRRENESAVAAAESRAAAEQLKVLGMSSAAI 183

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
                                         +++    +      + S + G++V  +  S
Sbjct: 184 ------------------------------ARMAQSGEISSYAPVASTLHGSVVELKV-S 212

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                Q +  L  +   S +  + A+V  +Q   V  G T  +  P   +++       +
Sbjct: 213 PGQVVQPADALFTVADLSHVWAV-AEVPEQQADMVAVGQTVDIEVPALGNLK---LSGKL 268

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
             +  I+              V ++    A  + +  L+    A +L 
Sbjct: 269 IYVGQIVDPATRT--------VHVRT---AIDNKDGRLKPAMLATMLI 305



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 38/142 (26%), Gaps = 7/142 (4%)

Query: 37  LLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
           + P    +   G I  +   +  I +P +G I       G  +  G  L      E    
Sbjct: 58  VAPFSDVLRVPGLIDFDRQRMARIGAPVTGRITDISANLGQSVKPGDVLARLHSTE---- 113

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
             L    +  L+     E    +    +           E Q  +      +  S+    
Sbjct: 114 --LGSAQLAYLKARAQAELQQNNQTRARQLFAADVIGKAELQRRENESAVAAAESRAAAE 171

Query: 156 GISSVYRSLKMKLTRMRSIYLN 177
            +  +  S        +S  ++
Sbjct: 172 QLKVLGMSSAAIARMAQSGEIS 193


>gi|110678663|ref|YP_681670.1| RND family efflux transporter MFP subunit [Roseobacter
           denitrificans OCh 114]
 gi|109454779|gb|ABG30984.1| efflux transporter, RND family, MFP subunit [Roseobacter
           denitrificans OCh 114]
          Length = 375

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 15/146 (10%)

Query: 216 LNQQERIVYKSTLELRENI-------HEQKNMLRHINELYDEANLEFANY------LKEI 262
           L+   R       E R  I       +   N L  I  L + A+   + +      L E 
Sbjct: 96  LDILARQAQARLAEARAGIVIAQTRVNRAANALARIEGLRNTASFSTSRFDDAQSDLFEA 155

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           +  L + +       + L       ++  I +P AG ++  Q      +      ++ ++
Sbjct: 156 NGLLAEAEARVQTAEATLAETRYQLDRARITAPYAGIVLEVQIN-PGEFIASGAAVVTLL 214

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTA 348
              +   I A V  K +  ++ G   
Sbjct: 215 -DVQSMEIEASVPSKYVSVLQPGQAV 239



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 42/139 (30%), Gaps = 10/139 (7%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC-- 108
           +       I S  +G + +  V  G+ + QG  L T +      L    +  +   R   
Sbjct: 55  VVTAREGTIASRIAGTVDEIMVLEGASVDQGEMLATLDTELLDILARQAQARLAEARAGI 114

Query: 109 --------HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                         + ++ L N        F+  +  L +  G      ++V     +  
Sbjct: 115 VIAQTRVNRAANALARIEGLRNTASFSTSRFDDAQSDLFEANGLLAEAEARVQTAEATLA 174

Query: 161 YRSLKMKLTRMRSIYLNRL 179
               ++   R+ + Y   +
Sbjct: 175 ETRYQLDRARITAPYAGIV 193


>gi|62317258|ref|YP_223111.1| HlyD family secretion protein [Brucella abortus bv. 1 str. 9-941]
 gi|83269239|ref|YP_418530.1| heat shock protein DnaJ [Brucella melitensis biovar Abortus 2308]
 gi|225686675|ref|YP_002734647.1| RND family efflux transporter MFP subunit [Brucella melitensis ATCC
           23457]
 gi|254690764|ref|ZP_05154018.1| efflux transporter, RND family, MFP subunit [Brucella abortus bv. 6
           str. 870]
 gi|254695931|ref|ZP_05157759.1| efflux transporter, RND family, MFP subunit [Brucella abortus bv. 3
           str. Tulya]
 gi|254698543|ref|ZP_05160371.1| efflux transporter, RND family, MFP subunit [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254731990|ref|ZP_05190568.1| efflux transporter, RND family, MFP subunit [Brucella abortus bv. 4
           str. 292]
 gi|256111172|ref|ZP_05452208.1| efflux transporter, RND family, MFP subunit [Brucella melitensis
           bv. 3 str. Ether]
 gi|256255947|ref|ZP_05461483.1| efflux transporter, RND family, MFP subunit [Brucella abortus bv. 9
           str. C68]
 gi|256262191|ref|ZP_05464723.1| acriflavin resistance protein [Brucella melitensis bv. 2 str. 63/9]
 gi|260544495|ref|ZP_05820316.1| acriflavin resistance protein A [Brucella abortus NCTC 8038]
 gi|260756336|ref|ZP_05868684.1| efflux transporter [Brucella abortus bv. 6 str. 870]
 gi|260759764|ref|ZP_05872112.1| efflux transporter [Brucella abortus bv. 4 str. 292]
 gi|260763003|ref|ZP_05875335.1| efflux transporter [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882160|ref|ZP_05893774.1| efflux transporter [Brucella abortus bv. 9 str. C68]
 gi|261216358|ref|ZP_05930639.1| efflux transporter [Brucella abortus bv. 3 str. Tulya]
 gi|265992684|ref|ZP_06105241.1| efflux transporter [Brucella melitensis bv. 3 str. Ether]
 gi|62197451|gb|AAX75750.1| HlyD family secretion protein [Brucella abortus bv. 1 str. 9-941]
 gi|82939513|emb|CAJ12485.1| Heat shock protein DnaJ:Secretion protein HlyD [Brucella melitensis
           biovar Abortus 2308]
 gi|225642780|gb|ACO02693.1| efflux transporter, RND family, MFP subunit [Brucella melitensis
           ATCC 23457]
 gi|260097766|gb|EEW81640.1| acriflavin resistance protein A [Brucella abortus NCTC 8038]
 gi|260670082|gb|EEX57022.1| efflux transporter [Brucella abortus bv. 4 str. 292]
 gi|260673424|gb|EEX60245.1| efflux transporter [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676444|gb|EEX63265.1| efflux transporter [Brucella abortus bv. 6 str. 870]
 gi|260871688|gb|EEX78757.1| efflux transporter [Brucella abortus bv. 9 str. C68]
 gi|260917965|gb|EEX84826.1| efflux transporter [Brucella abortus bv. 3 str. Tulya]
 gi|262763554|gb|EEZ09586.1| efflux transporter [Brucella melitensis bv. 3 str. Ether]
 gi|263091887|gb|EEZ16209.1| acriflavin resistance protein [Brucella melitensis bv. 2 str. 63/9]
 gi|326411066|gb|ADZ68130.1| RND family efflux transporter MFP subunit [Brucella melitensis M28]
 gi|326554358|gb|ADZ88997.1| RND family efflux transporter MFP subunit [Brucella melitensis
           M5-90]
          Length = 372

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 97  RIDDVEQRANMRVAQASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 157 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 216 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 263



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 58  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 110

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + S+      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 111 QASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 170

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 171 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 227

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 228 IGMGVTVALLADPSIEAEGNIRELS 252


>gi|288819025|ref|YP_003433373.1| acriflavin resistance protein [Hydrogenobacter thermophilus TK-6]
 gi|288788425|dbj|BAI70172.1| acriflavin resistance protein [Hydrogenobacter thermophilus TK-6]
 gi|308752609|gb|ADO46092.1| efflux transporter, RND family, MFP subunit [Hydrogenobacter
           thermophilus TK-6]
          Length = 371

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 55/171 (32%), Gaps = 4/171 (2%)

Query: 205 LFEKNAVSQNDLNQQER-IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           L + +AVS+     +E      S  E  +  +E+   L   N +  +   +         
Sbjct: 105 LAQASAVSEQVKQAEEAYKSAISNYEAVKKTYERYLSLLKENAITQQEFDQIKAQYDAAK 164

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             +EQ +        +   +    +  TI +P  G + + +     + A     L+ I  
Sbjct: 165 AQVEQAKAGIRAAQFQRKAVVSNLDYTTIRAPFDGYVAHKKVD-MGDLAGPGTVLLVI-- 221

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
                 +   +  K +  ++ G    V         + +   +   +DPI 
Sbjct: 222 ERPPYKLEVNLPEKYVGRIRVGDVYPVYIDALNKTVQGRVSEVSPSVDPIT 272



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 41/127 (32%), Gaps = 2/127 (1%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +  D+V EI +  +G I   +V+ G  + +G  LLT +  +           +K      
Sbjct: 63  IVADHVAEISTRVAGKITSVRVKEGQAVKKGQILLTLDASDILAQASAVSEQVKQAEEAY 122

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
            +  S  + +   Y+        +E  +                  +      ++    +
Sbjct: 123 KSAISNYEAVKKTYERYLSLL--KENAITQQEFDQIKAQYDAAKAQVEQAKAGIRAAQFQ 180

Query: 171 MRSIYLN 177
            +++  N
Sbjct: 181 RKAVVSN 187


>gi|261341155|ref|ZP_05969013.1| putative drug efflux protein [Enterobacter cancerogenus ATCC 35316]
 gi|288316449|gb|EFC55387.1| putative drug efflux protein [Enterobacter cancerogenus ATCC 35316]
          Length = 354

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 41/116 (35%), Gaps = 4/116 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I      +G  + +G  L   +D E    + L +  + +    +   +  L    +++
Sbjct: 58  GVITNIHFRDGQYVKKGDVLFELDDAEPRAAVRLAQAEVTSAEATLRQAQQQL----SRF 113

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           + L  +       + +   +     + +         R++ +  TR+ S    R+ 
Sbjct: 114 ESLGSSNAISRHDVDNARMQRDVARAALEQAKARLETRNVTLAYTRIISPIDGRVG 169



 Score = 43.1 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 88/290 (30%), Gaps = 45/290 (15%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                +      +++V ++      ++         +E ++     + + H +D   +K 
Sbjct: 14  LQPAFAAAIPVRVAAVEQTAHAAERQIPGRIEAIHTVELRARTEGVITNIHFRDGQYVKK 73

Query: 205 ---LFE-KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
              LFE  +A  +  +   +  V  +   LR+   +         E    +N    + + 
Sbjct: 74  GDVLFELDDAEPRAAVRLAQAEVTSAEATLRQAQQQLSRF-----ESLGSSNAISRHDVD 128

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS-QPLM 319
                 +  +       ++L     T     I+SPI G + ++Q     +        L+
Sbjct: 129 NARMQRDVARAALEQAKARLETRNVTLAYTRIISPIDGRVGHSQFH-VGSLVNPGSGVLV 187

Query: 320 KIVPHSKLTYIRAKVTPKQIQH--------VKKGYTATVR-----FPHYADIREKKFKAI 366
           ++V          ++ P +I           K G  A +      +    D   ++    
Sbjct: 188 EVV----------QLDPIRIAFALEEGAFATKAGQHADISAMKRAWQALIDSNGQRVLGE 237

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
           +  +D  I  +  ++                F++   +L  G    V   
Sbjct: 238 LTSVDNRIDPRTASVML-----------RAEFANPRHQLLPGGNVNVYLR 276


>gi|218260888|ref|ZP_03475962.1| hypothetical protein PRABACTJOHN_01626 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224310|gb|EEC96960.1| hypothetical protein PRABACTJOHN_01626 [Parabacteroides johnsonii
           DSM 18315]
          Length = 387

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 35/110 (31%), Gaps = 8/110 (7%)

Query: 55  NVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +V  ++         G ++   V+ G  + +G  L      E  + +   + + K ++  
Sbjct: 56  DVQAVQFVEIKPKVEGFVEDVLVDEGEHVKKGQVLFKLSSAELYEEVKEAQANYKQVQAE 115

Query: 110 I---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +   + E   +  L  K  +     E    +      +     S++    
Sbjct: 116 LKMAEVEADRVKRLVEKDIISPIRLEQALAEADVARLRVQQAKSRLLRAE 165


>gi|167566718|ref|ZP_02359634.1| putative efflux transporter, MFP subunit [Burkholderia oklahomensis
           EO147]
          Length = 357

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/305 (9%), Positives = 82/305 (26%), Gaps = 5/305 (1%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            S    +      +      R + +L   G +      +    I  ++        + + 
Sbjct: 39  ASGNGRIEATEIDVATKLPGRIDDILVDEGDFVKAGQPLAKMEIQVLHAQYDEATAQRQR 98

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
                  +E++ +  R+   + Q  + + ++  +             R    S  EL ++
Sbjct: 99  ALNTAAGIESQVAQRRSDKVAAQAMVVLRESELDAAKRRLVRSETLSREGASSMQELDDD 158

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              +    +                ++     L           + +  ++       ++
Sbjct: 159 RA-RSRSAQAAVSAAAAQVAAAQAAIEATEAQLVAAHSAVTAADATVARVQADINDSELV 217

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFP 353
           SP  G + Y +             ++ +V  S   Y+   +    +  V  G  A +   
Sbjct: 218 SPRDGRVQY-RVAQPGEVLPAGGKVLNLVDLSD-VYMTFFLPETVVGKVALGADARIILD 275

Query: 354 HYADIREKKFKAIIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
              +       + +        +  +  N + +  + V  +I       +   ++ G P 
Sbjct: 276 AAPNYVIPATVSFVASTAQFTPKTVETANERQKLMFRVKARIDRELLQKHLKLVKTGLPG 335

Query: 412 EVLFT 416
                
Sbjct: 336 VAWVR 340



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 40/135 (29%), Gaps = 2/135 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V+ G  +  G PL   E        D      +         +S +    +  
Sbjct: 58  GRIDDILVDEGDFVKAGQPLAKMEIQVLHAQYDEATAQRQRALNTAAGIESQVAQRRSDK 117

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +     RE +L     K     S+  +   +S  + L     R RS          +
Sbjct: 118 VAAQAMVVLRESELDA--AKRRLVRSETLSREGASSMQELDDDRARSRSAQAAVSAAAAQ 175

Query: 185 SSLLRALLSSHQKDL 199
            +  +A + + +  L
Sbjct: 176 VAAAQAAIEATEAQL 190


>gi|168063979|ref|XP_001783944.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664538|gb|EDQ51254.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1005

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 71/223 (31%), Gaps = 16/223 (7%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEK-SALDFLNNKYDVLEKAFESREEQLLDFLG-- 143
            ED     +   +  +  +LR  +D  +  A + L    +   +  E +   ++      
Sbjct: 355 LEDERFK-ISKERADAEASLRASLDRIRMEAAEELKRHEEAAARQLEQQNNIIVALQEGE 413

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE-------NKSSLLRALLSSHQ 196
           K +   +++    + S   ++     R R +     + +       N+++ +   L    
Sbjct: 414 KEYRMAAEISRKKLDSERGAVVAAEDRARRLESQLQEEKALSLSAHNRAAEIEDKLRQTN 473

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA----N 252
           ++L   K   ++ A+++    + E       L+L +   +       + E    A     
Sbjct: 474 RELENEKT-AKEGALAKIARLEVEMEAASRDLKLEKQRLQGARERIVLRETQLRAFHSTA 532

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
            E A   +     L    RT  D  S             I SP
Sbjct: 533 AEIAELQQRQQDQLSTMIRTLEDGDSDNDYDHTNVPNVRIRSP 575


>gi|218529244|ref|YP_002420060.1| hypothetical protein Mchl_1246 [Methylobacterium chloromethanicum
           CM4]
 gi|218521547|gb|ACK82132.1| conserved hypothetical protein [Methylobacterium chloromethanicum
           CM4]
          Length = 411

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 88/293 (30%), Gaps = 23/293 (7%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           E   ++     L+ L    +   ++         R    +   ++SI    +  + + S 
Sbjct: 83  EAQLDADLGAALERLKALDAQIGQLAALKKELAARLGDYQKASLQSIQQEIIIRQQRIST 142

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            +A   S + DL+  + L     V+ + +         S  E      E   + + ++ L
Sbjct: 143 AQANRVSAEADLSRKQTLGATGVVANSSVEAARAAAVASGNEGTIAKAELDRLSQQLDAL 202

Query: 248 YD-----EANLEF---ANYLKEISRDLEQNQRTFADEMSKLTILE----------KTREQ 289
                  E   +         E++  L   +     E +++ +LE               
Sbjct: 203 KRGTFVGEGRNDVPYSQQRGDEVTIQLANVEAQAKIERARVKLLEKQLFIERNRNDRLSS 262

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            +I  P  G I  N     SN       L +++   +  ++   +       +K G  A 
Sbjct: 263 ASIRLPFRGVIWRNNVVGGSNVI-VGNELTRLL-DCRDLFVDILLDEVDYDQIKPGDPAE 320

Query: 350 VRFPHYADIREKKFK---AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFS 399
           VR    +D+   +          ++ +           +   + L +   A  
Sbjct: 321 VRLLGTSDVIAGRVNSVRGSSAAVEEVTLAAIPPKSRGKNARIRLILDQNAMQ 373


>gi|76154815|gb|AAX26229.2| SJCHGC01885 protein [Schistosoma japonicum]
          Length = 976

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 78/221 (35%), Gaps = 6/221 (2%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           L  E           + +   L+  ++     ++  N     LE+   +    L ++  K
Sbjct: 416 LESEAESAKSKCGQLEKTKARLQGELEDLMVDVERANGLASQLERKQNNFNRTLAEWQKK 475

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           Y  + +++ N    +  +S     T +  +     ++  +   LR    +   ++  +  
Sbjct: 476 YADSQAELENAQRDARGQS-----TEIFRLKAQLEEVHEQMEGLRRENKNLSDEIHDLTE 530

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
              +   S +++++  R +     EL+  + E ++ L         A LE +   +EI R
Sbjct: 531 QLGEGGRSVHEIDKNRRRLEMEKEELQAALEEAESALEQEEAKVQRAQLEMSQIRQEIDR 590

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            L + +  F +   K        +Q ++ +   G     + 
Sbjct: 591 RLAEKEEEF-EATRKNHQRAMESQQASLEAEAKGKAEAMRV 630



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 66/208 (31%), Gaps = 13/208 (6%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                  +   I  L+  ++     ++ L  +   L        EQL +     H     
Sbjct: 486 AQRDARGQSTEIFRLKAQLEEVHEQMEGLRRENKNLSDEIHDLTEQLGEGGRSVHEIDKN 545

Query: 152 VFNYGI------SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                +      +++  +          +   +L++      +   L+  +++    +  
Sbjct: 546 RRRLEMEKEELQAALEEAESALEQEEAKVQRAQLEMSQIRQEIDRRLAEKEEEFEATRKN 605

Query: 206 FEKNAVSQNDLNQQER----IVYKSTLELRENIHEQKNMLRHINELYDEANL---EFANY 258
            ++   SQ    + E        +   +L ++I+E +  L   N    E      +F   
Sbjct: 606 HQRAMESQQASLEAEAKGKAEAMRVKKKLEQDINELEVSLDGANRARAEQEKNVKKFQQQ 665

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKT 286
           ++E+   LE +QR   D   +    E+ 
Sbjct: 666 VRELQSQLEDDQRQRDDLREQFQAAERR 693



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 65/193 (33%), Gaps = 8/193 (4%)

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++K L   +      LD  N              +++ +   +     S++    +S 
Sbjct: 262 EKTVKALEVQLQEVSVKLDEANRNLSEQSSTKARSSQEVSELQRQLEEAESQL--SQLSK 319

Query: 160 VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ 219
           V + L  +L   R    N  D     + L   + +   DL  ++   E+   ++ DL   
Sbjct: 320 VKQQLSAQLEEAR---HNLEDESRMKAKLNGEVRNLSSDLDSLRETLEEEQSAKGDL--- 373

Query: 220 ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK 279
           +R + K   EL++            +E  +E   +    ++E+  + E  +         
Sbjct: 374 QRQLQKLQGELQQLRSRGGGGGDVRSEEVEELKRKMNAKIQELESEAESAKSKCGQLEKT 433

Query: 280 LTILEKTREQKTI 292
              L+   E   +
Sbjct: 434 KARLQGELEDLMV 446



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 66/202 (32%), Gaps = 16/202 (7%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  + +++     ++ E++ +     +   + +  + R  +  +          +     
Sbjct: 554 EELQAALEEAESALEQEEAKVQRAQLEMSQIRQEIDRRLAEKEEEFEATRKNHQRAMESQ 613

Query: 157 ISSVYRSLKMKLTRMR----------SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
            +S+    K K   MR           + ++        +     +   Q+ +  +++  
Sbjct: 614 QASLEAEAKGKAEAMRVKKKLEQDINELEVSLDGANRARAEQEKNVKKFQQQVRELQSQL 673

Query: 207 EKNAVSQNDLNQQ----ERIVYKSTLELRENI--HEQKNMLRHINELYDEANLEFANYLK 260
           E +   ++DL +Q    ER       EL E     +Q    R I E       + A  + 
Sbjct: 674 EDDQRQRDDLREQFQAAERRATVLAGELDELRIALDQAERSRKIAEAERAEASDRATEMS 733

Query: 261 EISRDLEQNQRTFADEMSKLTI 282
             +  L   +R    +++ +  
Sbjct: 734 TQTASLAAQKRKLEADLAAMQA 755



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 77/212 (36%), Gaps = 10/212 (4%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ED +       ++      R  +      LD L    D  E++ +  E +  +   + 
Sbjct: 672 QLEDDQRQRDDLREQFQAAERRATVLA--GELDELRIALDQAERSRKIAEAERAEASDRA 729

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               ++     +++  R L+  L  M      + DLE  ++  +      +K +     +
Sbjct: 730 TEMSTQT--ASLAAQKRKLEADLAAM------QADLEEAANEAKQADERAKKAMADSARV 781

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           FE+    Q      E+   +  ++++E +   ++      +   +A  +    ++E+  +
Sbjct: 782 FEEIRQEQEHTQHVEKARKQLEVQVKELMARLEDSESGAMKNGRKAMGKLEQRVRELETE 841

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           LE  QR   +       +++  ++ T+ +   
Sbjct: 842 LEAEQRRHGETQKNFRKVDRRMKEITLQAEED 873


>gi|327306269|ref|XP_003237826.1| hypothetical protein TERG_02536 [Trichophyton rubrum CBS 118892]
 gi|326460824|gb|EGD86277.1| hypothetical protein TERG_02536 [Trichophyton rubrum CBS 118892]
          Length = 1610

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 74/224 (33%), Gaps = 16/224 (7%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           +E   +    +  +   + LR   +  +  +    +      +  E   +++ D      
Sbjct: 702 YESSRSYATSNPTREDFELLRQENNALRREVTAQTSMLTSRNREKEKLYQEIEDLKLDRR 761

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           +    +    I     S        ++   +R  LEN++  LR  +S+ + D   +++  
Sbjct: 762 NEGRSIAGDSIFDRSASRAQSRAMSQASDNDRDTLENRNGELRDQVSALKLDNQGLRSQL 821

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           ++ A   N+L+  ER        + + + + +       +  +E   E          +L
Sbjct: 822 DEYA---NELSSVEREYQAELDRVSQELRDLQAQRDQALQAIEEREAELQELKAAAQEEL 878

Query: 267 -----------EQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
                      E  QR  A+  ++   L+    Q  + S   G 
Sbjct: 879 DILGEELDLKHEDCQRLEAEVRNQQENLD--ALQAEVRSANEGI 920



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 71/243 (29%), Gaps = 34/243 (13%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSI----KNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             Q+      L  ++      +D     +    +  +  +D     L  L  + D   +A 
Sbjct: 805  DQVSA----LKLDNQGLRSQLDEYANELSSVEREYQAELDRVSQELRDLQAQRDQALQAI 860

Query: 132  ESREEQLLDFLGKYHSTCS-------------KVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            E RE +L +                       +     + +   +L      +RS     
Sbjct: 861  EEREAELQELKAAAQEELDILGEELDLKHEDCQRLEAEVRNQQENLDALQAEVRSANEGI 920

Query: 179  LDLENKSSLLRALLSSHQKDLT--------MMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
              LE  +        + Q++L         M +NL E N    N + +       S  E+
Sbjct: 921  SRLEEDAQSNLLKYKAVQQELDYVNQEIDSMERNLVEAN----NKVQRLTVQQESSQNEI 976

Query: 231  RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                 EQ      I +L  E      +   E      +  R  ADE  +  ++    +Q+
Sbjct: 977  AFLREEQDGDKIKIGDLESELRFVQTSLQSE-KEKTSELDRQLADERYQHEMVSSKEKQE 1035

Query: 291  TIL 293
               
Sbjct: 1036 VQR 1038



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 88/231 (38%), Gaps = 18/231 (7%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY-------- 124
            ++G +I  G        ++T+  +  +K     L   +  E+   + +++K         
Sbjct: 983  QDGDKIKIGDLESELRFVQTS--LQSEKEKTSELDRQLADERYQHEMVSSKEKQEVQRII 1040

Query: 125  DVLEKAFESREEQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
            D L +   + +E++        S   +   +   +  +  SL+  L  +      R  L 
Sbjct: 1041 DDLNRESTASKEEIRKLKKNLSSREVEATMWKDRLMELENSLREALGDLNG---TRSSLL 1097

Query: 183  NKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQND--LNQQERIVYKSTLELRENIHEQKN 239
               + L+  L S   +L  ++ +L EK A+ +N   L +   +  +   +L E   + + 
Sbjct: 1098 TSITKLQKELESTSLELESVRASLDEKEALLRNRDALLESHGLETQKLADLLERERQARR 1157

Query: 240  MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +H  E   +++ + +  + + +  +   +     +  +   LE+  + +
Sbjct: 1158 ADKHSFEQSLKSHQQASRTIVQNNSRITDLESARNQDRKRFNHLEQQYKDQ 1208



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 75/231 (32%), Gaps = 28/231 (12%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              + I   +   ++        +  LD++N + D +E+       ++     +  S+ ++
Sbjct: 916  ANEGISRLEEDAQSNLLKYKAVQQELDYVNQEIDSMERNLVEANNKVQRLTVQQESSQNE 975

Query: 152  VFNYGISS---------VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS-----SHQK 197
            +                +   L+   T ++S      +L+ + +  R           Q+
Sbjct: 976  IAFLREEQDGDKIKIGDLESELRFVQTSLQSEKEKTSELDRQLADERYQHEMVSSKEKQE 1035

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--------------LRENIHEQKNMLRH 243
               ++ +L  ++  S+ ++ + ++ +    +E              LRE + +       
Sbjct: 1036 VQRIIDDLNRESTASKEEIRKLKKNLSSREVEATMWKDRLMELENSLREALGDLNGTRSS 1095

Query: 244  INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            +     +   E  +   E+           A   ++  +LE    +   L+
Sbjct: 1096 LLTSITKLQKELESTSLELESVRASLDEKEALLRNRDALLESHGLETQKLA 1146


>gi|322391778|ref|ZP_08065243.1| SMC structural maintenance of chromosomes partitioning protein
           [Streptococcus peroris ATCC 700780]
 gi|321145258|gb|EFX40654.1| SMC structural maintenance of chromosomes partitioning protein
           [Streptococcus peroris ATCC 700780]
          Length = 1178

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 80/217 (36%), Gaps = 17/217 (7%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           +  +       +D+    I+  +  +D  +  L+ +        +  E  EE+      K
Sbjct: 216 IELDGQRKGIYLDVLVAQIQANKDELDLTEEELNQVQELLTSYYQKREELEEENQTLKKK 275

Query: 145 YHSTCSKVFNYG---------ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR----AL 191
                +++             IS + R L +       + LN+ + + + + L     AL
Sbjct: 276 RQDLQAEMAKDQSSLMDLTSLISDLERKLALSKLETEQVALNQQEAQARLAGLDEKRNAL 335

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
               ++    +  L E  AV+  +LN+ E  +   + +  + I + +         + E 
Sbjct: 336 TQEKKEKEANLSQLEENLAVNTKELNRLEAELLAFSDDPDQMIEQLRERFV----AFLEE 391

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             + +N L  I  DLE +++    +  +L  L++  E
Sbjct: 392 EADVSNQLTRIENDLENSRQQTQKQEEQLESLKEQLE 428



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 19/164 (11%), Positives = 52/164 (31%), Gaps = 6/164 (3%)

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
           A  + E+Q L+   +   +          ++   L  +  R   +   +         + 
Sbjct: 774 ALIATEKQKLESEIEEIKSNKNAIQERYQNLQEKLSQERLRKTEMLGQKRYEVADIERIN 833

Query: 190 ALLSSHQKDLTMMKNLFEKNA-----VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             L +   +   ++ L ++       V    L +QE        E+++ +  ++  L  I
Sbjct: 834 KELENLNIEQEEIERLLQEKVDNLEKVDTELLTKQETEAKSQKEEIQQGLIRKQFELDDI 893

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
               D+         ++ + +  + Q        K+T   +  +
Sbjct: 894 EGQLDDIASHLEQARQQ-NEEWIRKQTRAEATKEKITDRLRYLQ 936


>gi|265765214|ref|ZP_06093489.1| membrane fusion efflux protein [Bacteroides sp. 2_1_16]
 gi|263254598|gb|EEZ26032.1| membrane fusion efflux protein [Bacteroides sp. 2_1_16]
          Length = 366

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 96/293 (32%), Gaps = 55/293 (18%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E R+E L+    +     S+V+     ++ +   +   ++          E++  +    
Sbjct: 56  EPRDEVLI--KPQISGIISEVYKEAGQTIKQGEVIAKVKVIPELGQLNSAESRVRVAEIS 113

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            +  + D   +K L+    +S+ D  + E  + K+  EL+      K+ L  I E   + 
Sbjct: 114 TAQAETDHERIKKLYNDKLISREDYEKSEVEIKKAREELQT----AKDALEIIKEGITKN 169

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           +  F++                                  I S I G I+       ++ 
Sbjct: 170 SASFSS--------------------------------TLIRSTIDGLILDVPIKVGNSV 197

Query: 312 A-----QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      +  +   +     + K+   ++  + +G    +      ++    F A 
Sbjct: 198 IMSNTFNDGTTIATVANMND-LIFKGKIDETEVGRIHEGMPVKLTIGALQNLT---FDAE 253

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +E I P   +++   Q         +I     + +++++R+G+ A      + 
Sbjct: 254 LEYISPKGVEENGANQ--------FEIKAAVHAPDSVQIRSGYSANAEIVLQR 298



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 54/139 (38%), Gaps = 6/139 (4%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           +  +E +  ++G++   D V  IK   SGII +   E G  I QG  +   + I     +
Sbjct: 42  IADLEKTTVATGKVEPRDEV-LIKPQISGIISEVYKEAGQTIKQGEVIAKVKVIPELGQL 100

Query: 97  DLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--K 151
           +  +  ++         +T+   +  L N   +  + +E  E ++     +  +     +
Sbjct: 101 NSAESRVRVAEISTAQAETDHERIKKLYNDKLISREDYEKSEVEIKKAREELQTAKDALE 160

Query: 152 VFNYGISSVYRSLKMKLTR 170
           +   GI+    S    L R
Sbjct: 161 IIKEGITKNSASFSSTLIR 179


>gi|261189141|ref|XP_002620982.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
 gi|239591767|gb|EEQ74348.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
          Length = 1355

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 71/198 (35%), Gaps = 9/198 (4%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           + +   +   K L+     E+  L  L ++ ++  +  E R  Q      K         
Sbjct: 393 ENLKTLRAEQKKLQAANAGEREQLANLESRQEMQREDVE-RLLQRARIQKKIALLERSRP 451

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                   +S +    + R++     DLEN+ +     ++  ++ L  ++ +  +    +
Sbjct: 452 VPRYQEAVQSFREAQHKRRNLQQEHGDLENQLAPALKSVNDKKEYLNSLQAVVAQK---R 508

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + + +QE +V  S L+L +     +++   I     EA  +     +EI +  +Q     
Sbjct: 509 DMVTRQEGVVADSALKLEKTQESIQDLDAQI-----EAEKKATKTHREIFKKSQQIINKL 563

Query: 274 ADEMSKLTILEKTREQKT 291
             +M +  +         
Sbjct: 564 TRQMEEEPVEYDAAAYTE 581


>gi|218695696|ref|YP_002403363.1| multidrug efflux system subunit MdtA [Escherichia coli 55989]
 gi|260856054|ref|YP_003229945.1| multidrug efflux system, subunit A [Escherichia coli O26:H11 str.
           11368]
 gi|254810271|sp|B7L9U7|MDTA_ECO55 RecName: Full=Multidrug resistance protein mdtA; AltName:
           Full=Multidrug transporter mdtA; Flags: Precursor
 gi|218352428|emb|CAU98202.1| multidrug efflux system, subunit A [Escherichia coli 55989]
 gi|257754703|dbj|BAI26205.1| multidrug efflux system, subunit A [Escherichia coli O26:H11 str.
           11368]
 gi|323152294|gb|EFZ38583.1| efflux transporter, RND family, MFP subunit [Escherichia coli
           EPECa14]
 gi|323183855|gb|EFZ69246.1| efflux transporter, RND family, MFP subunit [Escherichia coli 1357]
 gi|324119103|gb|EGC12992.1| efflux transporter [Escherichia coli E1167]
          Length = 415

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I+   N V ++S   G +     + G Q+  G  L   +  
Sbjct: 64  AATA-VEQAVPRYLTGLGTIIAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 121

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 122 QFKVALAQTQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 177

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 178 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 210



 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 122 QFKVALAQTQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 181

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 182 DEASVASAQLQLD 194


>gi|195108441|ref|XP_001998801.1| GI24167 [Drosophila mojavensis]
 gi|193915395|gb|EDW14262.1| GI24167 [Drosophila mojavensis]
          Length = 2037

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 76/207 (36%), Gaps = 3/207 (1%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +       +  K  +I+ +   +D +  A+  L ++   L+   +  +E+L         
Sbjct: 1621 DLTRLQMALQEKDCNIRQVSERLDNQNRAMVQLEDRCSSLKTTVDQLKERLQKSAVTETQ 1680

Query: 148  TCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               ++      +S      +    +++ +  +    EN+  +L   L S Q +L  ++  
Sbjct: 1681 LRGEIKTLQKELSEQGHCSQANEDKVKLLQKSLQTTENEKRILTERLDSAQTNLNELRRS 1740

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQK-NMLRHINELYDEANLEFANYLKEISR 264
             +        L +Q   +      L   +   K N      +  +      +   +E+SR
Sbjct: 1741 QQAQLDGNQRLQEQVTELEVQRSALESQLRIAKWNQENGDKDAGNGGGGGGSREEEELSR 1800

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
             L+ +QR  ++  SKL +L+   +Q  
Sbjct: 1801 QLKSSQREKSELRSKLQVLQDKVKQLE 1827



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 67/195 (34%), Gaps = 7/195 (3%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
                ++   + L      E      ++N     E A +   +++L           +   
Sbjct: 929  QRKAQETKTQLLNAARAAESDFNQKISNLQAAAEDAAKRHGDEVLQLRNALEKRMQQALQ 988

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENK--SSLLRALLSSHQKDLTMMKN---LFEK- 208
               ++    ++    R+ ++  +   L  +   +L+RA     Q  L   ++   + E+ 
Sbjct: 989  ALQTAKDDEIEKLQERIAALQAHIESLVQQHEETLIRAENEKQQALLMAHRDKQAVAERL 1048

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             AVS++   +QE  + +S  E      +Q+  +  + +   +       +  ++   + +
Sbjct: 1049 EAVSRDLKTEQE-SLDRSKREANARDEKQRAAIAQLKDEIVQMRTREEEHKIKLEECIRK 1107

Query: 269  NQRTFADEMSKLTIL 283
             +   +    +   L
Sbjct: 1108 QELQLSSIREERDTL 1122


>gi|171704175|dbj|BAG16415.1| endocytic adaptor protein [Aspergillus oryzae RIB40]
          Length = 1043

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 73/224 (32%), Gaps = 5/224 (2%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++ Q   L      +T   +   +    N R   + ++  L   + +   LE+    
Sbjct: 350 EQQRLAQEQLLRDQYQTQTQGRLAELEQENLNARAQYERDQLMLQQYDRRVKDLEEQMNQ 409

Query: 134 REEQLLDFLGKYHSTCSKVFNYGI---SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               L +          +     +    S Y +L    +++R  +L+ L       L  A
Sbjct: 410 LTSNL-NMQSASKDEQIRSLQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTTKSLKLKAA 468

Query: 191 LL-SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               + ++   + + L  KN    + + +++R ++        N  E + + R +    +
Sbjct: 469 SAQEAIERREKLERELKTKNLELADMIRERDRALHDRDRLTGNNKEELEKVKRELRLAIE 528

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            A         EIS  L +  R  AD    L    +  E  +  
Sbjct: 529 RAENAERQKGTEISTLLSKYNREMADLEEALRNKNRALEDISSR 572



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 78/210 (37%), Gaps = 7/210 (3%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           FE+ +       +    + LR    T+         + ++  +A   R++ +L    +  
Sbjct: 341 FEEQQRLQAEQQRLAQEQLLRDQYQTQTQGRLAELEQENLNARAQYERDQLMLQQYDRRV 400

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD----LTMM 202
               +  N   S++      K  ++RS+        +K   L  L S  +++    L   
Sbjct: 401 KDLEEQMNQLTSNLNMQSASKDEQIRSLQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTT 460

Query: 203 KNLFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           K+L  K A +Q  + +    ER +    LEL + I E+   L   + L      E     
Sbjct: 461 KSLKLKAASAQEAIERREKLERELKTKNLELADMIRERDRALHDRDRLTGNNKEELEKVK 520

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +E+   +E+ +     + ++++ L     +
Sbjct: 521 RELRLAIERAENAERQKGTEISTLLSKYNR 550


>gi|157364842|ref|YP_001471609.1| chromosome segregation protein SMC [Thermotoga lettingae TMO]
 gi|157315446|gb|ABV34545.1| chromosome segregation protein SMC [Thermotoga lettingae TMO]
          Length = 1175

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 91/229 (39%), Gaps = 13/229 (5%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G +  +   +    D+  ++ I + +  +K     +  E++ L+ ++ ++  L+    
Sbjct: 759 SEGMRSRREQIISELSDL--SNQIGIYEEELKKFDEQLSHERNILEEISTQFSELKAELT 816

Query: 133 SREEQLLDFLGKYHS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           +  E+ + +  +        +  +   + +   +K     +  +    LD + +   ++ 
Sbjct: 817 NLLERRVHYESELRKLKDEKQKLSEESTQLNSQIKEIEGEIDRLKQILLDNQREIETIKK 876

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
              +  + + M ++  ++     N LN+ E+ +     +++E+  + ++ L H+     E
Sbjct: 877 ETENLFETMKMQRSDKDQKF---NKLNELEKKMQ----QMKEDREKLRDYLHHLELSIQE 929

Query: 251 ANLEFANYLKEISRDLEQNQRTFA-DEMSKL-TILEKTREQKTILSPIA 297
           +  +    + E+ R+   N    + D +  L   LE  + +   L P+ 
Sbjct: 930 SQAKIDQLINEVDRETAMNTEELSGDVLESLKNELEDLQNKIKYLGPVD 978



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 72/199 (36%), Gaps = 7/199 (3%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E +   ++++     ++++   +D ++ +L +L  K     + + SR E +      Y+ 
Sbjct: 169 ESLARLEIVNNNLARVQDILYELDRQRKSL-YLKAKRAERYREYSSRLENVKKL---YYG 224

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              K     ++ +    +    +++++    + +E   S L+   ++  +++    NL E
Sbjct: 225 NILKKEIKRLNHLSNQQEETTEKIKNLQKELVGVETNWSALKQEFANVDREIENFTNLLE 284

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN---YLKEISR 264
                Q  L +   +  K   E      E    L  INE  +             K +  
Sbjct: 285 DYKKRQTTLIELREMYTKRLNERENKFVEMTTRLDSINEQIESIEKRSEELNLIFKALME 344

Query: 265 DLEQNQRTFADEMSKLTIL 283
           ++   ++   D   +   L
Sbjct: 345 EINTKEKMLQDVEERRNQL 363


>gi|149916045|ref|ZP_01904568.1| tRNA pseudouridine synthase A [Roseobacter sp. AzwK-3b]
 gi|149810119|gb|EDM69967.1| tRNA pseudouridine synthase A [Roseobacter sp. AzwK-3b]
          Length = 213

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 46/154 (29%), Gaps = 2/154 (1%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +E  + + G ++  D +       +  +    V  G  +  G  L+  +  +    +  
Sbjct: 50  RVEDVLHAFGHVVPADIIRVSMPRHAAPVTDILVNEGDWVDAGQLLVRIDRTDIQRDLLQ 109

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK--YHSTCSKVFNYG 156
            + ++   R  I   +S+L              +  E                ++     
Sbjct: 110 AQATLSATRADIRIARSSLQVAATDIAQRRAELDRLERLAKTGASSEVQRQDATRALQQA 169

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           +S    +         S  L RL++E  S+L   
Sbjct: 170 MSEHEAAKARLAGAQTSETLARLEVERVSTLTDQ 203


>gi|117926441|ref|YP_867058.1| RND family efflux transporter MFP subunit [Magnetococcus sp. MC-1]
 gi|117610197|gb|ABK45652.1| efflux transporter, RND family, MFP subunit [Magnetococcus sp.
           MC-1]
          Length = 389

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 71/191 (37%), Gaps = 7/191 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I I+  ++G ++   +  EI+   SGI+ +     G  + +G PL   +           
Sbjct: 58  INIAEEAAGRVVAYQSA-EIRPQVSGILTERLFTEGGTVKEGQPLYQIDPAVFQAAYASA 116

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
               +  + +    K+ L+  N +Y+ L K     ++Q  D         +++     + 
Sbjct: 117 LADWRKAQAN----KALLEAKNQRYEALVKRDAVSQQQYDDVRTNLALAQAEIAITQAAI 172

Query: 160 VYRSLKMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
               + +  T++ +    R+   L +K +L+ A  +     +T +  L+    +    L 
Sbjct: 173 AQARINLNYTKVLAPISGRIGKSLVSKGALVTANQAQALATITQLDPLYVDINLPIESLM 232

Query: 218 QQERIVYKSTL 228
           +  +   +   
Sbjct: 233 RLRKQAARLQQ 243


>gi|45382679|ref|NP_990805.1| myosin-10 [Gallus gallus]
 gi|212452|gb|AAA48988.1| nonmuscle myosin heavy chain [Gallus gallus]
          Length = 2007

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 16/213 (7%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ E   L+  N+K+   +K  E R  +    L +       
Sbjct: 996  ARQKLQLEKVTAEAKIKKMEEEILLLEDQNSKFLKEKKLMEDRIAECTSQLAEEEEKAKN 1055

Query: 152  V-------------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +                 +    ++ +      R +     DL+++ + L+A +   +  
Sbjct: 1056 LAKLKNKQEMMITDLEERLKKEEKTRQELEKAKRKLDGETTDLQDQIAELQAQIEELKIQ 1115

Query: 199  LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            L   +   +      ++   Q+    K   EL+  I E +  L       ++A  +  + 
Sbjct: 1116 LAKKEEELQAALARGDEEAVQKNNALKVIRELQAQIAELQEDLESEKASRNKAEKQKRDL 1175

Query: 259  LKEISR---DLEQNQRTFADEMSKLTILEKTRE 288
             +E+     +LE    T A +    T  E+   
Sbjct: 1176 SEELEALKTELEDTLDTTAAQQELRTKREQEVA 1208



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 70/210 (33%), Gaps = 8/210 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE---KAFESREEQLLDFLGKYHS 147
            E        +  ++ +R  ++  +  L    +    LE   +A +++ E+ L    + + 
Sbjct: 1560 ELEKSKRTLEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQARDEQNE 1619

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLF 206
               ++    +  +   L+ +  +       +  +E     L   + +  K     +K L 
Sbjct: 1620 EKKRMLVKQVRELEAELEDERKQRALAVAAKKKMEMDLKDLEGQIEAANKARDEAIKQLR 1679

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA---NYLKEIS 263
            +  A    D  ++      S  E+     E +  L+ +     +   EFA      +   
Sbjct: 1680 KLQA-QMKDYQRELEEARASRDEIFAQSKESEKKLKGLEAEILQLQEEFAASERARRHAE 1738

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            ++ ++     A+  S  + L   + +    
Sbjct: 1739 QERDELADEIANSASGKSALLDEKRRLEAR 1768



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 66/211 (31%), Gaps = 5/211 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            T +       +  K+            E++       +      A    E        K 
Sbjct: 1189 TLDTTAAQQELRTKREQEVAELKKAIEEETKNHEAQIQEIRQRHATALEELSEQLEQAKR 1248

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-N 204
                 +    G+ S  + L  ++  ++ +         K       L++   +   ++  
Sbjct: 1249 FKANLEKNKQGLESDNKELACEVKVLQQVKAESEHKRKKLDAQVQELTAKVTEGERLRVE 1308

Query: 205  LFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            L EK    QN+L+          K  ++  ++    ++ L+   EL  E   +  N    
Sbjct: 1309 LAEKANKLQNELDNVSSLLEEAEKKGIKFAKDAASLESQLQDTQELLQEETRQKLNLSSR 1368

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            I R LE+ +    ++  +     K  E++ +
Sbjct: 1369 I-RQLEEEKNNLQEQQEEEEEARKNLEKQML 1398



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 77/207 (37%), Gaps = 7/207 (3%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  +  +     D    ++  L     T +  ++ +  + + LE   ++ E+  L     
Sbjct: 1540 LRADMEDLMSSKDDVGKNVHELEKSKRTLEQQVEEMRTQLEELEDELQATEDAKLRLEVN 1599

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK---DLTM 201
              +  ++      +   ++ + K   ++ +     +LE++       +++ +K   DL  
Sbjct: 1600 MQAMKAQFERDLQARDEQNEEKKRMLVKQVRELEAELEDERKQRALAVAAKKKMEMDLKD 1659

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            ++   E    ++++  +Q R +     + +  + E +     I     E+  +    LK 
Sbjct: 1660 LEGQIEAANKARDEAIKQLRKLQAQMKDYQRELEEARASRDEIFAQSKESEKK----LKG 1715

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTRE 288
            +  ++ Q Q  FA         E+ R+
Sbjct: 1716 LEAEILQLQEEFAASERARRHAEQERD 1742



 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                D      KN+      E+   +    + +    +  +R  +      +     +K 
Sbjct: 1481 QKKFDQMLAEEKNISARYAEERDRAEAEAREKETKALSL-ARALEEALEAKEEFERQNKQ 1539

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM----------- 201
                +  +  S       +  +  ++  LE +   +R  L   + +L             
Sbjct: 1540 LRADMEDLMSSKDDVGKNVHELEKSKRTLEQQVEEMRTQLEELEDELQATEDAKLRLEVN 1599

Query: 202  ---MKNLFEKNAVSQNDLNQQER-----IVYKSTLELRENIHEQKNMLRHINELY----- 248
               MK  FE++  ++++ N++++      V +   EL +   ++   +    ++      
Sbjct: 1600 MQAMKAQFERDLQARDEQNEEKKRMLVKQVRELEAELEDERKQRALAVAAKKKMEMDLKD 1659

Query: 249  DEANLEFANYLK-EISRDLEQNQRTFADEMSKLTILEKTRE 288
             E  +E AN  + E  + L + Q    D   +L     +R+
Sbjct: 1660 LEGQIEAANKARDEAIKQLRKLQAQMKDYQRELEEARASRD 1700


>gi|298504951|gb|ADI83674.1| efflux pump, RND family, membrane fusion protein [Geobacter
           sulfurreducens KN400]
          Length = 422

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 85/281 (30%), Gaps = 49/281 (17%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           E   D         S       +S+  S+      +    +   +  N+    +  L+  
Sbjct: 105 EANADRTAHVSPRISGKIVSVRASLGDSVAAGQPLVTLDSVELGEALNRYHQSKTRLALA 164

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q  +  +K L EK   ++ D+ Q E     +  EL  +                      
Sbjct: 165 QSSMDRIKALVEKKIAARKDILQAETDYKMAQTELHTD---------------------- 202

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                      E+    +    S LT     +    + SPI G I    +      A  S
Sbjct: 203 -----------EERLALYGVSASDLTSAGHRKPLLPVRSPIGGVITEKHAI-VGELADPS 250

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           + L   V      ++   +  K +  V +G +A V    + D++    K  I  I  ++ 
Sbjct: 251 KSLFT-VADLSSVWVMVDINEKDLAKVHRGQSAIVTLGAFPDVK---LKGRITYIADLVD 306

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
                +      +  +++ + A      +L+    A V  T
Sbjct: 307 VGSRTV------KARVEVLNPAR-----KLKPEMFATVELT 336



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 49/132 (37%), Gaps = 2/132 (1%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSP-FSGIIKKFQVENGSQILQGTPLLTF 87
             ++  +    +   +S++G++    +     SP  SG I   +   G  +  G PL+T 
Sbjct: 83  GVIVVAAAAQRLAGVISATGKVEANADRTAHVSPRISGKIVSVRASLGDSVAAGQPLVTL 142

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           + +E  + ++ +    K       +    +  L  K     K     E        + H+
Sbjct: 143 DSVELGEALN-RYHQSKTRLALAQSSMDRIKALVEKKIAARKDILQAETDYKMAQTELHT 201

Query: 148 TCSKVFNYGISS 159
              ++  YG+S+
Sbjct: 202 DEERLALYGVSA 213


>gi|269104528|ref|ZP_06157224.1| multidrug resistance efflux pump [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161168|gb|EEZ39665.1| multidrug resistance efflux pump [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 355

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 77/206 (37%), Gaps = 13/206 (6%)

Query: 11  RNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKF 70
           +   ++ +R     II  +  + + I+   +     + E      VV+I    SG +   
Sbjct: 2   QTAESAFRRWMRCLIILFLIFLAYIIVA--DRHAPLTTESRVHGYVVQIAPEVSGNVTSV 59

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +V+N   + +G  L T +D +    ++  KV++           +  D    +    + A
Sbjct: 60  KVKNNQDVKKGELLFTIDDSKYQIAVERAKVNLAQAHEQETALYAQADAARAQIATAQAA 119

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           +        +   + ++   K+ N  + S          + +    N    + +  +++A
Sbjct: 120 Y--------NNANREYNRIQKLANKNLVS-QSMRDNAFAQDKVTRSNLAAAKQQLLVIQA 170

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDL 216
            L S   D TM+     +NA+ Q +L
Sbjct: 171 KLGSTPGDSTMVH--AAENALKQAEL 194



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 50/174 (28%), Gaps = 20/174 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
           +   +     +L     +  ++Y        + +  +A  ++  ++   ++ L  KN VS
Sbjct: 81  YQIAVERAKVNLAQAHEQETALYAQADAARAQIATAQAAYNNANREYNRIQKLANKNLVS 140

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           Q+         +      R N+   K  L  I         +                  
Sbjct: 141 QS----MRDNAFAQDKVTRSNLAAAKQQLLVIQAKLGSTPGDST---------------M 181

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                + L   E       + +P  G I   Q       A  ++P++  +P   
Sbjct: 182 VHAAENALKQAELDLSHTQVKAPSNGVITNMQLD-EGTMASANKPILTFIPTDN 234


>gi|237830805|ref|XP_002364700.1| rhoptry protein, putative [Toxoplasma gondii ME49]
 gi|211962364|gb|EEA97559.1| rhoptry protein, putative [Toxoplasma gondii ME49]
 gi|221507581|gb|EEE33185.1| conserved hypothetical protein [Toxoplasma gondii VEG]
          Length = 958

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/232 (12%), Positives = 62/232 (26%), Gaps = 15/232 (6%)

Query: 68  KKFQVENGSQILQGT------PLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
               V  G              L   ++ +  + +  K++  +  +     E   +    
Sbjct: 713 TSVFVAPGDVPDADQHLEQMIVLKRVQEQKAQEELLRKELKEEQRKARERAEAEKMVAEE 772

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM----KLTRMRSIYLN 177
            +  +LE+  +   E       +      +          +  K     K          
Sbjct: 773 ERKKLLEQRTQEELETKRRIQEEKELREKQAEEMRKQEEEQRKKQEAEEKARAAAEEARK 832

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           R ++E   +         ++     K   E    ++ +  +  +   +   E    + EQ
Sbjct: 833 RKEVEIARAQEEQEAERQREAAEEEKRKKEAQRTAEEEAAKLRKEEARKRDEEAAKLAEQ 892

Query: 238 KNMLRHINELYDEA-----NLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
           +  LR   +   +A       E A   +E +  L    R  AD    L    
Sbjct: 893 RESLRRKEQKEKQAMLAKKRAEAAEKEQERNSQLSDQSRASADGGVPLRAAA 944


>gi|197294457|ref|YP_001798998.1| hypothetical protein PAa_0382 [Candidatus Phytoplasma australiense]
 gi|171853784|emb|CAM11717.1| Conserved hypothetical protein [Candidatus Phytoplasma
           australiense]
          Length = 1164

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 82/197 (41%), Gaps = 10/197 (5%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           + T  I+    ++ +    ++     L+    K   L    +++E++L            
Sbjct: 421 QLTKQIEDINTNLASKNEELNNLNQKLEEEAKKQTELNDVIQTQEKKLKQIQISSEEKQQ 480

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +  N  I  +  +L  +             ++++   L   L+S+++DL   +NL ++  
Sbjct: 481 E-LNNKIKDIQTTLDKQAKVTEDKNKELEQMQSQKIQLENQLASNKQDL---QNLQKEIF 536

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS---RDLE 267
             +  L  +E+ + +       +  E++ +   IN L ++ N E  NY  ++S    +++
Sbjct: 537 NKEAKLEDKEKELAEQK---NLSDAEKQQLTSEINNLKNDINQEKVNYQAQVSLKEEEIK 593

Query: 268 QNQRTFADEMSKLTILE 284
           Q Q+T +D   +LT  +
Sbjct: 594 QLQQTESDLKQQLTKTQ 610



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 80/233 (34%), Gaps = 25/233 (10%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +       EDI T   +  K   + NL   ++ E      LN+     EK  +  +   
Sbjct: 418 EKQQLTKQIEDINT--NLASKNEELNNLNQKLEEEAKKQTELNDVIQTQEKKLKQIQISS 475

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +   + ++    +    +    +  + K   +  +   ++ LEN+ +  +  L + QK+
Sbjct: 476 EEKQQELNNKIKDI-QTTLDKQAKVTEDKNKELEQMQSQKIQLENQLASNKQDLQNLQKE 534

Query: 199 LTMM--------KNLFEKNAVSQNDLNQQERIVYKSTLEL--------------RENIHE 236
           +           K L E+  +S  +  Q    +     ++               E I +
Sbjct: 535 IFNKEAKLEDKEKELAEQKNLSDAEKQQLTSEINNLKNDINQEKVNYQAQVSLKEEEIKQ 594

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            +     + +   +   E  +  ++  + LE+ QR   +    +  LE+  ++
Sbjct: 595 LQQTESDLKQQLTKTQAETMSLREQHVKTLEEIQRQITNYKKTVAELEEETQK 647



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 66/194 (34%), Gaps = 14/194 (7%)

Query: 110  IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
            I   ++  +  N   ++       +  QL       + T        +++    +K    
Sbjct: 817  IKLNEAKENLKNTSQELANYGTNLKNAQLEYNQLLENQTPDDSLQQELNNKANHIKTLKN 876

Query: 170  RMRSIYLNRLDLENKSSLLR-ALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             M+ + +      ++   L+    +  +K    +  + ++  VS+ +  Q E+ + +   
Sbjct: 877  EMQKLEIKEQGFRSEIDTLKLENKNLKEKYTNDLTKIKQELDVSKTENKQLEKEMQEIQA 936

Query: 229  EL-------RENIHEQKNMLRHINELYDEA------NLEFANYLKEISRDLEQNQRTFAD 275
            EL          + +  +    I EL  +         +    +K+   +++Q Q T  +
Sbjct: 937  ELIKNGNADDALVKQLNHKEAQIKELKGKINTLEANETKLQTIIKQKDEEIKQLQETIQE 996

Query: 276  EMSKLTILEKTREQ 289
            +  ++  L    E 
Sbjct: 997  QAEQIIKLTAEIEN 1010


>gi|33865619|ref|NP_897178.1| ABC transporter [Synechococcus sp. WH 8102]
 gi|33632789|emb|CAE07600.1| possible ABC transporter component [Synechococcus sp. WH 8102]
          Length = 303

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/248 (12%), Positives = 83/248 (33%), Gaps = 10/248 (4%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGI-----IKKFQVENGSQILQGTPLLTFED-IETTDL 95
            +V++ G++    +V  + +P +G+     I++  V+ G+ I +G  L  F+        
Sbjct: 48  EAVAALGQLEPAGDVRRLAAPTAGVAGTPRIEQLLVDEGAVIRRGQVLARFDTKAGLEAD 107

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   +  + +L   I  +K  +   +   +    +   RE    D +         +   
Sbjct: 108 LAAVEADLASLEDEIALQKVEVSRYSRGANWGAVSLVQRESSREDLVRLEGEQAQALARR 167

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
               V       ++ +  + L     E +      ++          +    ++ ++Q +
Sbjct: 168 QGLLVDLEDSELVSPLDGLVLEIHAREGERPGSDGVMDIGASQKMQARIEVYESDIAQIN 227

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L+QQ     + T E      +    +  I+    + ++   +   +    + +      D
Sbjct: 228 LDQQ----VQLTSENGGFSGQLSGRVIQISPRVQQRDVLSTDPTGDADARVVEVLVALDD 283

Query: 276 EMSKLTIL 283
              +  I 
Sbjct: 284 ADVRRVIR 291



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 67/217 (30%), Gaps = 21/217 (9%)

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV-SQNDLNQQERIVYKSTLELREN 233
            L +L+       L A  +       + + L ++ AV  +  +  +         +L   
Sbjct: 52  ALGQLEPAGDVRRLAAPTAGVAGTPRIEQLLVDEGAVIRRGQVLARFDTKAGLEADLAAV 111

Query: 234 IHEQKNMLRHINELYDEAN---------LEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
             +  ++   I     E +                +    DL + +   A  +++   L 
Sbjct: 112 EADLASLEDEIALQKVEVSRYSRGANWGAVSLVQRESSREDLVRLEGEQAQALARRQGLL 171

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP-LMKIVPHSKLTYIRAKVTP--KQIQH 341
              E   ++SP+ G ++   +       +     +M I        ++A++      I  
Sbjct: 172 VDLEDSELVSPLDGLVLEIHAR-EGE--RPGSDGVMDI---GASQKMQARIEVYESDIAQ 225

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           +       V+          +    + +I P + Q+D
Sbjct: 226 INLDQQ--VQLTSENGGFSGQLSGRVIQISPRVQQRD 260


>gi|318040546|ref|ZP_07972502.1| membrane-fusion protein [Synechococcus sp. CB0101]
          Length = 369

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 58/166 (34%), Gaps = 7/166 (4%)

Query: 211 VSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +SQ D+ +Q + ++     ++R  + + K   +     +              ++  ++ 
Sbjct: 81  ISQGDVVKQGQLLLVLDQAQIRAELADLKAQEQKAKLNWQRYEFLVPQGAA-TAQQRDEF 139

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +  +      +   +       +LSP+ G +   Q     +  +   P  K++  +    
Sbjct: 140 KAQYISAREAVIAKQADLAYSNLLSPLPGVVADVQV-KIGDVLRAGDPFTKLI-KNNTLL 197

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
            R +V     + ++ G    +  P      +   +  +  +DP ++
Sbjct: 198 ARVEVPSTYAERIRVGLPVQLSLPG---TTKVLAETRVSSVDPTVT 240



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 11/105 (10%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I++  +  G  + QG  LL  +  +    +             +  ++        +
Sbjct: 73  SGRIQQLPISQGDVVKQGQLLLVLDQAQIRAEL-----------ADLKAQEQKAKLNWQR 121

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
           Y+ L     +  +Q  +F  +Y S    V        Y +L   L
Sbjct: 122 YEFLVPQGAATAQQRDEFKAQYISAREAVIAKQADLAYSNLLSPL 166


>gi|270157579|ref|ZP_06186236.1| putative multidrug resistance protein [Legionella longbeachae
           D-4968]
 gi|269989604|gb|EEZ95858.1| putative multidrug resistance protein [Legionella longbeachae
           D-4968]
          Length = 336

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 73/208 (35%), Gaps = 25/208 (12%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             S LE+R   ++  ++ + ++ L  +  +E         + + Q ++      ++    
Sbjct: 140 ALSKLEVRTLDYDLHSLEQKMDSLKKQIAIE--------DQQIIQQRKLIKALKAEKHNA 191

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               +  T+ +P  G +V N    +    +  +PL   +  +   +++A +    ++ V+
Sbjct: 192 RVNLDLTTVRAPADG-VVDNLYIGAGTPVKIHEPLFSFI-DTSKWWVQANLYETDLRRVR 249

Query: 344 KGYTA--TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT----------QEYYEVIL 391
            G      +R  ++  I   +    I   D   +      Q            + + + +
Sbjct: 250 PGDKVYIMLRMYYFNKIFHGRIVNTIWAADRQTTDPRTQQQKVGSNNQWLLEPQRFPIQI 309

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +I D    D    L  G  A V    ++
Sbjct: 310 EILDP---DPKYPLHPGASAYVYIKTRS 334



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 53/156 (33%), Gaps = 16/156 (10%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NV  + +  SG I K  V NGS + +  PL               +++ +  +   +
Sbjct: 43  VVTNVTPVAADVSGFITKIYVHNGSIVKKDQPLFEV-------YQKPYRLTYEYAKARYE 95

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
               +L  +N +    E    + +        +Y    +      +S +          +
Sbjct: 96  EAIESLKVINRQTQKTETLLAAAKYAYEKAKFEYQLKKAPSVREALSKL---------EV 146

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           R++  +   LE K   L+  ++   + +   + L +
Sbjct: 147 RTLDYDLHSLEQKMDSLKKQIAIEDQQIIQQRKLIK 182


>gi|258622033|ref|ZP_05717061.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|262172726|ref|ZP_06040404.1| probable RND efflux membrane fusion protein [Vibrio mimicus MB-451]
 gi|258585686|gb|EEW10407.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|261893802|gb|EEY39788.1| probable RND efflux membrane fusion protein [Vibrio mimicus MB-451]
          Length = 368

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 51/150 (34%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  +    + +  L+ +  ++ I +P AG I     F    Y Q       IV     
Sbjct: 142 EAEANYYALAADIESLKASIARREIKAPFAGVIGIRNVF-LGQYLQPGT---DIVRLEDT 197

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V    I  +       +    Y       FK  I  I+P +S Q   +Q Q 
Sbjct: 198 SVMRLRFTVPQTDISRISLNQEVDIFVDAYPQT---SFKGSISAIEPAVSVQSGLIQVQ- 253

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +++ +LR+G  A    
Sbjct: 254 ----------ANIPNSDGKLRSGMFARANI 273



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 48/141 (34%), Gaps = 1/141 (0%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
            + + G I     V  + S  SG+I +   E+G+Q+ +  PL+  +       +   +  
Sbjct: 57  VIEAIGFIEPNQGV-TLTSETSGVIDQISFESGTQVSKDQPLVLLDSAVEKANLKSSEAR 115

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +   +   +  K      +   +  ++A  +      D      S   +      + V  
Sbjct: 116 LPAAKAKYERYKGLFAKGSISKESYDEAEANYYALAADIESLKASIARREIKAPFAGVIG 175

Query: 163 SLKMKLTRMRSIYLNRLDLEN 183
              + L +      + + LE+
Sbjct: 176 IRNVFLGQYLQPGTDIVRLED 196


>gi|254414001|ref|ZP_05027769.1| hypothetical protein MC7420_4118 [Microcoleus chthonoplastes PCC
           7420]
 gi|196179137|gb|EDX74133.1| hypothetical protein MC7420_4118 [Microcoleus chthonoplastes PCC
           7420]
          Length = 487

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/372 (12%), Positives = 114/372 (30%), Gaps = 43/372 (11%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNV-VEIKSPFSGI 66
           N  RN   S     LL I  ++  +     +P+  SV++  ++    N    + +   G 
Sbjct: 49  NPTRNTSTSFPYKHLLGIGIVVLGLGLISQIPVSNSVNAEAQLEPAPNSHQIVYTEVPGT 108

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           + +              LL   + +      +  +S +++   I   +S  D   + Y  
Sbjct: 109 LTE--------------LLVQPNQQVQVNQAIAIISTEDMDVEIAQSQSEFDEAISNYKS 154

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGIS-SVYRSLKMKLTRMRSIYLNRLDLENKS 185
                 +   ++ +   K      ++            ++     + ++      + ++ 
Sbjct: 155 ASFQLNTLSAKINETSVKESLITQQIQQLQQEFPHLPEVEKLNQEIAALQSTITGVRSQI 214

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
           + +   L+  Q+ ++  ++L  +  ++ N L   +        E+     E   + + I 
Sbjct: 215 AGITETLARTQERISRYQDLVTQGVLALNILEDMQDRESHLISEITTKSSEINQLKQQIG 274

Query: 246 ELYDEA-------NLEFANYLKEISR----------DLEQNQRTFADEMSKLTILEKTRE 288
               E          E A+   E+            +L   ++    +   L  L+   E
Sbjct: 275 AKQAEIKIVTNRKQEELADLQNELHTLAATRQTATVELSAARKGVTSQQPLLNTLKTELE 334

Query: 289 QKT--------ILSPIAGTIVYNQSFS-SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           ++         + +   G I+               +P+++I           +V     
Sbjct: 335 RRQNKQQNHQILKAKQTGFIITPDFHKLLGRKMPAGEPILEIA-DLSHLVAIIEVPQTDS 393

Query: 340 QHVKKGYTATVR 351
             VK G   T R
Sbjct: 394 DIVKDGAKVTFR 405


>gi|148558774|ref|YP_001257839.1| HlyD family secretion protein [Brucella ovis ATCC 25840]
 gi|148370059|gb|ABQ62931.1| HlyD family secretion protein [Brucella ovis ATCC 25840]
          Length = 372

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 97  RIDDVEQRANMRVAQASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 157 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 216 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 263



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 58  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 110

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + S+      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 111 QASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 170

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 171 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 227

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 228 IGMGVTVALLADPSIEAEGNIRELS 252


>gi|145541301|ref|XP_001456339.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124424150|emb|CAK88942.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1798

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 77/225 (34%), Gaps = 9/225 (4%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
              + Q    +  +  +  + I      +   +  ++      + L    D LE   + + 
Sbjct: 887  QFVNQQEIEIQTQINQLQNQISQLNTQLSQTKLLLENRNKEYELLKENQDKLEYEIDQQR 946

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS-S 194
             +    L    ++  ++      ++ +  K    +           E +   L+      
Sbjct: 947  NEYEYQLEDKQASFQELEEQQKRALEQKEKQLEQQKNDYERRIQQKEAEIQELKLHYEKI 1006

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN----ELYDE 250
             +++  ++K L ++  + + +LNQ  + +     E +E + +     +       EL  +
Sbjct: 1007 LEENRGIIKQLEQELLIKKEELNQAVQELIMKEEEYQEQLSQVNEKQKESEDNCFELRSK 1066

Query: 251  ANLEFANYLKEISRDLEQNQRTF----ADEMSKLTILEKTREQKT 291
            A  E    + ++  D+EQ          D M++  +L    +QK 
Sbjct: 1067 AIPEKDQTIDQLKADVEQKDYELKIQNEDFMNQQNLLFDIIKQKD 1111



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/204 (11%), Positives = 77/204 (37%), Gaps = 5/204 (2%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D E+     + +  ++  +   + ++    F+N +   ++      + Q+     +   +
Sbjct: 858  DYESQLQTAVNQHQVEIQQLKNENKRQLDQFVNQQEIEIQTQINQLQNQISQLNTQL--S 915

Query: 149  CSKVFNYGISSVYRSLKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             +K+     +  Y  LK    ++   I   R + E +    +A     ++     + L +
Sbjct: 916  QTKLLLENRNKEYELLKENQDKLEYEIDQQRNEYEYQLEDKQASFQELEEQQK--RALEQ 973

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            K    +   N  ER + +   E++E     + +L     +  +   E     +E+++ ++
Sbjct: 974  KEKQLEQQKNDYERRIQQKEAEIQELKLHYEKILEENRGIIKQLEQELLIKKEELNQAVQ 1033

Query: 268  QNQRTFADEMSKLTILEKTREQKT 291
            +      +   +L+ + + +++  
Sbjct: 1034 ELIMKEEEYQEQLSQVNEKQKESE 1057



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 65/216 (30%), Gaps = 15/216 (6%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                D    ++   +   +  K  +  L N+ +  +       E+L + L +       
Sbjct: 706 AKQQSDSLSNTVNQYQAENERLKQQIILLQNEKETQQIQSNQNLEELNNSLSEQKQQNEA 765

Query: 152 VFNYGISSVYR------SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           +      S+         +   LT    +    L L  +   +         DL      
Sbjct: 766 LLIQLQKSMQEQNNLINQIHSSLTENSELKEQTLLLTREKQDIELENKKQIDDLLNQIQS 825

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             K    Q    Q+E   + +  ++ E I+ QK+    +    ++  +E      E  R 
Sbjct: 826 LIKQQEQQEQQYQKEIQSFTNQSKI-EQINVQKDYESQLQTAVNQHQVEIQQLKNENKRQ 884

Query: 266 LE--------QNQRTFADEMSKLTILEKTREQKTIL 293
           L+        + Q       ++++ L     Q  +L
Sbjct: 885 LDQFVNQQEIEIQTQINQLQNQISQLNTQLSQTKLL 920


>gi|83645965|ref|YP_434400.1| multidrug resistance efflux pump [Hahella chejuensis KCTC 2396]
 gi|83634008|gb|ABC29975.1| Multidrug resistance efflux pump [Hahella chejuensis KCTC 2396]
          Length = 351

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 52/187 (27%), Gaps = 20/187 (10%)

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 + F   +     +L+        +  +            A LS   ++   +K 
Sbjct: 72  LFDIDPEPFKIALEQAQLNLERVKQNNTQLDASIAAARADVDAAAATLSQKNREALRLKT 131

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           LF++N VSQ  L+  E     +  +L       K +                        
Sbjct: 132 LFQRNVVSQQQLDTAESNATTAQAKLASMKAHLKELEVS-------------------RG 172

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +L     T     ++L   +       I +   G I   Q   +  YA    PL+ +V  
Sbjct: 173 ELSDANLTIRTAETQLKQAQLNLSYTRIKAEEDGVITNLQL-EAGAYAVAGSPLVALVSD 231

Query: 325 SKLTYIR 331
           +      
Sbjct: 232 NLDVIAD 238



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 67/192 (34%), Gaps = 8/192 (4%)

Query: 28  IIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTF 87
           I+ ++ ++  L  +I++  + + +    V ++    SG I    VEN   + +G  L   
Sbjct: 16  IVFVLVFAYFLIADIAMPLTPQAMATRIVTKVSPRISGPITAVHVENNQPVHKGDILFDI 75

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL-------- 139
           +       ++  +++++ ++ +     +++       D        +  + L        
Sbjct: 76  DPEPFKIALEQAQLNLERVKQNNTQLDASIAAARADVDAAAATLSQKNREALRLKTLFQR 135

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
           + + +     ++       +   S+K  L  +        D           L   Q +L
Sbjct: 136 NVVSQQQLDTAESNATTAQAKLASMKAHLKELEVSRGELSDANLTIRTAETQLKQAQLNL 195

Query: 200 TMMKNLFEKNAV 211
           +  +   E++ V
Sbjct: 196 SYTRIKAEEDGV 207


>gi|309791261|ref|ZP_07685792.1| efflux transporter, RND family, MFP subunit [Oscillochloris
           trichoides DG6]
 gi|308226687|gb|EFO80384.1| efflux transporter, RND family, MFP subunit [Oscillochloris
           trichoides DG6]
          Length = 489

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/251 (9%), Positives = 79/251 (31%), Gaps = 8/251 (3%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           V + G +L   +  E++    G++ +  V  G  +  G PL   +  E    ++  + ++
Sbjct: 42  VLADGRVLPLTSA-ELRFLSPGLVAEILVHEGETVAAGQPLARLDSAELQLGVEQAQAAL 100

Query: 104 KNLRCHIDTEKSAL-DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
            + +       +     +            +   Q+   + +     ++       +   
Sbjct: 101 GHAQALYAQLSAGASPDVVAAAQATLAQARATARQVAGSVTQSDLAAARASVAQAQAELN 160

Query: 163 SL------KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            L      +       ++   + DL+++   L A     +  LT   N       S + +
Sbjct: 161 QLLAGPKNEAVTQTQAALAQAQADLQSQRDALSAAKGQAELQLTQAANQLRDAQDSYSRI 220

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
             Q R   +   +L ++  + ++      +  +    +    L++  +  +    +    
Sbjct: 221 YWQNREAERDDPDLPQSQRDAEDAALRAVQSAEAQLAQAQLALEQAQQAEQSGVASAESR 280

Query: 277 MSKLTILEKTR 287
           +++        
Sbjct: 281 VAQAQASLDLL 291



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 91/318 (28%), Gaps = 29/318 (9%)

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           +++ AL     + ++      ++     D   + +    +               +   +
Sbjct: 187 SQRDALSAAKGQAELQLTQAANQLRDAQDSYSRIYWQNREAERDDPDLPQSQRDAEDAAL 246

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           R++      L      L     + Q  +   ++   +   S  DL        +      
Sbjct: 247 RAVQSAEAQLAQAQLALEQAQQAEQSGVASAESRVAQAQASL-DLLLTGADADQIAGARA 305

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR------------TFADEMSK 279
                Q N+ R   E            +++   +L Q Q                     
Sbjct: 306 RLAAAQANLTRLTGEARTGELSAAQAVIQQAQANLNQAQAGPREVDLAVAAAQVQLAEVA 365

Query: 280 LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK-VTPKQ 338
           +   E   ++  + +P A T+V             S+P + I+  +    I    +T   
Sbjct: 366 VQQAELALDRAILKAPFAATVVAINL-KLGEV-TPSEPAI-ILADTSAWKIETSDLTELD 422

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAF 398
           I +V  G   T+ F    D+     +  + +I  + S      Q    Y V++K T    
Sbjct: 423 IVNVAVGAPVTLSFDALPDLT---LEGTVTEIKSLSS----TYQGDVIYTVVIKPTTW-- 473

Query: 399 SDNNIELRNGFPAEVLFT 416
              +  LR    A V   
Sbjct: 474 ---DARLRWNMTATVAIR 488


>gi|299136983|ref|ZP_07030166.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX8]
 gi|298601498|gb|EFI57653.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX8]
          Length = 417

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 68/175 (38%), Gaps = 13/175 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SVS++G +   D+     +   G +KK  V  G ++ QG  L+  +D E    +   
Sbjct: 49  IPSSVSTNGIVQPVDDFQAH-AVAPGAVKKLFVTVGEKVSQGQELVRMDDSEARKNVVAA 107

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLE-KAFESREEQLLDFLGKYHSTCSK--VFNYG 156
           + ++++    +   ++       +    +  A + +E+Q    L    +  +K       
Sbjct: 108 QAALQSSESTLKNMQNGGTHGELQTQTADMNAAQVQEQQSAASLSSLEALQAKGAASANE 167

Query: 157 ISSVYRSLKMKLTRMRSIYLN---------RLDLENKSSLLRALLSSHQKDLTMM 202
           +++  + L     R+ S+  +            L+ + +   A L + QK L  +
Sbjct: 168 VATAKQRLSESQARLASLQTHHSSPYGPNDIAPLQAQVAQAHATLEAAQKALADI 222



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 87/285 (30%), Gaps = 22/285 (7%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           ++L   +G+  S   ++     S   +++      ++S      +++N        L + 
Sbjct: 76  KKLFVTVGEKVSQGQELVRMDDSEARKNVVAAQAALQSSESTLKNMQN--GGTHGELQTQ 133

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             D+   +   +++A S + L   +     S  E+             +  L    +  +
Sbjct: 134 TADMNAAQVQEQQSAASLSSLEALQAKGAASANEVATAKQRLSESQARLASLQTHHSSPY 193

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                    D+   Q   A   + L   +K      I SPI GT+ Y             
Sbjct: 194 G------PNDIAPLQAQVAQAHATLEAAQKALADIDIHSPIPGTVYYIPVAQYDFV-PGG 246

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             L+  V       I+A     ++  +  G   T+ +       E+ +   I +I   I 
Sbjct: 247 DTLLD-VADLTHIQIQAYFDEPEVGKLADGQPVTIVWDA---KPERVWHGHILQIPTTII 302

Query: 376 QQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +       +     I+ + D      N +L       V    +  
Sbjct: 303 KYGTRYVGEC----IITVDDA-----NGDLLPNTNVTVKVITQQR 338


>gi|163782458|ref|ZP_02177456.1| hypothetical protein HG1285_06710 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882491|gb|EDP75997.1| hypothetical protein HG1285_06710 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 359

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 74/183 (40%), Gaps = 11/183 (6%)

Query: 43  SVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           +V  SG + ++  +  ++S  SG ++K  V+ G ++ +G  L   +     + I   +  
Sbjct: 33  AVYGSGYVKSDLYL-SVRSSVSGYVRKVFVDRGDRVKKGQTLALIDSGGLRERIGAIEKK 91

Query: 103 IKNLRCHI----DTEKSALDFLNNKYDVLEKAFESREEQLLDFL-----GKYHSTCSKVF 153
           IK L+  +    D  KS    ++ K + L+KA      +L  +       +      +++
Sbjct: 92  IKLLQDRLKEDSDFMKSLEHGISTKRENLDKAERRYRRRLRLYERGVIPKEALEEAERLY 151

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                 +  +      R+R +      LE +   LR  L+++    + ++ +  K  V +
Sbjct: 152 RLAKEDLRIAELSLRDRIRELETELSYLEKERDSLRRELNNYT-IRSPIEGIVLKRFVEE 210

Query: 214 NDL 216
            D 
Sbjct: 211 GDY 213



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 76/224 (33%), Gaps = 38/224 (16%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               I ++ + +K+   R++        LE+  S  R  L   ++       L+E+  + 
Sbjct: 81  LRERIGAIEKKIKLLQDRLKEDSDFMKSLEHGISTKRENLDKAERRYRRRLRLYERGVIP 140

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  L + ER+   +  +LR                   A L   + ++E+  +L   ++ 
Sbjct: 141 KEALEEAERLYRLAKEDLRI------------------AELSLRDRIRELETELSYLEKE 182

Query: 273 FADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ---PLMKIVPHSKL-- 327
                     L +     TI SPI G ++  +     +Y         L+ +    K   
Sbjct: 183 R-------DSLRRELNNYTIRSPIEGIVLK-RFVEEGDYVNPMSRENTLLSLGSLKKKVV 234

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
             +  +  P     V+KG    +       +  + F+  +E  D
Sbjct: 235 LLVDEEFAP----LVRKGQKVYITTDA---VPGRVFEGTVESFD 271


>gi|39936083|ref|NP_948359.1| RND multidrug efflux membrane fusion protein MexE [Rhodopseudomonas
           palustris CGA009]
 gi|39649937|emb|CAE28461.1| RND multidrug efflux membrane fusion protein MexE precursor
           [Rhodopseudomonas palustris CGA009]
          Length = 399

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/118 (12%), Positives = 46/118 (38%), Gaps = 2/118 (1%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            VEI+S  +G +++ Q   G+ + +G  L+  +       +D  +  +   R  +   K+
Sbjct: 74  RVEIRSRVAGAVQQIQFREGALVNKGDLLVRIDPSLYAAEVDRAQAQLSAARARVVFTKA 133

Query: 116 ALDFLN--NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            ++     +   + ++  ++R     +      S  + +    ++  Y  +   ++  
Sbjct: 134 DVERSQQLSSSSITQREVDNRLNAYREAEANLRSAEAALKTAELNLSYTEISAPVSGR 191



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/148 (10%), Positives = 46/148 (31%), Gaps = 13/148 (8%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN----AVSQNDLNQQERIVYKST 227
           R   + R+++ ++ +     +   +  L    +L  +       ++ D  Q +    ++ 
Sbjct: 68  RLEAIERVEIRSRVAGAVQQIQFREGALVNKGDLLVRIDPSLYAAEVDRAQAQLSAARAR 127

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
           +   +   E+   L   +    E +     Y         + +       + L   E   
Sbjct: 128 VVFTKADVERSQQLSSSSITQREVDNRLNAY--------REAEANLRSAEAALKTAELNL 179

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQS 315
               I +P++G +   +  +  N     
Sbjct: 180 SYTEISAPVSGRVGKVEI-TVGNLIAAG 206


>gi|118580617|ref|YP_901867.1| RND family efflux transporter MFP subunit [Pelobacter propionicus
           DSM 2379]
 gi|118503327|gb|ABK99809.1| efflux transporter, RND family, MFP subunit [Pelobacter propionicus
           DSM 2379]
          Length = 407

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 44/130 (33%), Gaps = 4/130 (3%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I + ++  G +    N V ++S   G + +     G  + +G  L   +      L+   
Sbjct: 67  ISVYLTGIGTVTP-LNTVTVRSRVDGQLMEVLYREGQTVSRGQLLARIDPRPFQVLLTQA 125

Query: 100 KVSIKNLRCHIDTEKSALDFLN---NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +  +   +  +   +  L        +  +  +  +++E  +  +     S   +V +  
Sbjct: 126 EGQMARDQAQLSNARVDLQRYRTLWAQNSIPRQQLDTQEALVRQYQAAVKSDQGQVDSAR 185

Query: 157 ISSVYRSLKM 166
           +   Y  +  
Sbjct: 186 LQLTYSRITA 195


>gi|117920151|ref|YP_869343.1| RND family efflux transporter MFP subunit [Shewanella sp. ANA-3]
 gi|117612483|gb|ABK47937.1| efflux transporter, RND family, MFP subunit [Shewanella sp. ANA-3]
          Length = 354

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 77/205 (37%), Gaps = 16/205 (7%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L E   V + D  Q+ +I+     + ++   ++      I E       +  N     + 
Sbjct: 73  LIEAINVEEGDRVQKGQILAVIDAKRQQYDLDRSEAEVKIIEQELNRLKKMTNKEFISAD 132

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            + + +      +++  + E   ++  ++SPI G +   +   + N AQ+   L  IV +
Sbjct: 133 SMAKLEYNLQAAIARRDLAELQVKESHVVSPIDGIVAK-RYVKAGNMAQEFGDLFYIV-N 190

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
               +    +  +Q+  ++ G  A V F       +    A + +I P++  Q       
Sbjct: 191 QDELHGIVHLPEQQLTSLRLGQEAQV-FS--NQQSKNAIHAKVLRISPVVDPQSGT---- 243

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
             ++V L +      + N  L+ G 
Sbjct: 244 --FKVTLAVP-----NQNAHLKAGM 261



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 14/171 (8%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           + S  +G+I+   VE G ++ +G  L   +       +D  +  +K     I+ E + L 
Sbjct: 66  VVSRIAGLIEAINVEEGDRVQKGQILAVIDAKRQQYDLDRSEAEVKI----IEQELNRLK 121

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            + NK  +   +    E  L   + +      +V    + S    +  K       Y+  
Sbjct: 122 KMTNKEFISADSMAKLEYNLQAAIARRDLAELQVKESHVVSPIDGIVAKR------YVKA 175

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            ++  +   L      +Q +L  + +L E+   S      QE  V+ +   
Sbjct: 176 GNMAQEFGDL--FYIVNQDELHGIVHLPEQQLTSLR--LGQEAQVFSNQQS 222


>gi|301768597|ref|XP_002919717.1| PREDICTED: citron Rho-interacting kinase-like [Ailuropoda
           melanoleuca]
          Length = 2027

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 7/188 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ++    DL D  K +++NL    + E      + ++   +  A +S+   L   + + 
Sbjct: 727 VLDNQIKKDLAD--KETLENLMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVEL 784

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                   N  + +  R++K +   +  +   +  LE ++  L A     ++ L   + +
Sbjct: 785 SEANKLAANSSLFT-QRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQL---EKI 840

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             ++   +N L + E  + + +LE  E   E K  L  +     E   +    L+     
Sbjct: 841 SHQDHSDKNRLLELETRLREVSLEHEEQKLELKRQLTELQLSLQERESQLT-ALQAARAA 899

Query: 266 LEQNQRTF 273
           LE   R  
Sbjct: 900 LESQLRQA 907



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 3/207 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESREEQLLDFL 142
              +     D +  K+   +  R  +  EKS  +    +   +   EK   +R +Q +   
Sbjct: 1026 VMDLEALNDELLEKERQWEAWRSVLGDEKSQFECRVRELQRMLDTEKQSRARADQRITES 1085

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +      K     I ++ ++LK +  +  S+     DLE K ++L     S Q+ L   
Sbjct: 1086 RQVVELAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQKLETE 1145

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            + L ++    Q  L QQ  +       L + + E  +    +     +   +  N     
Sbjct: 1146 RELKQRLLEEQAKLQQQMDLQKSHIFRLTQGLQEALDRADLLKTERSDLEYQLENIQVLY 1205

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQ 289
            S +  + + T + +   +  L+   +Q
Sbjct: 1206 SHEKVKMEGTISQQTKLIDFLQAKMDQ 1232



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 28/247 (11%), Positives = 72/247 (29%), Gaps = 40/247 (16%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-----------LDFLNNKYDVLEKAFES 133
            L     E    +   + +   L   +   K+            +  L    D +++ F++
Sbjct: 879  LQLSLQERESQLTALQAARAALESQLRQAKTELEETTAEAEEEIQALTAHRDEIQRKFDA 938

Query: 134  REE------QLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                      L + L +     +++ N    +S            +  +      L  + 
Sbjct: 939  LRNSCTVITDLEEQLNQLTEDNAELNNQNFYLSKQLDEASGANDEIVQLRSEVDHLRREI 998

Query: 186  SLLRALLSSHQKDLTMMKN---LFEKNAVSQN----DLNQQERIVYK------------- 225
            +     L+S ++ +  +K    + E+  +       +L ++ER                 
Sbjct: 999  TEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDELLEKERQWEAWRSVLGDEKSQFE 1058

Query: 226  -STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                EL+  +  +K      ++   E+       +KE   ++   Q+   ++  K   L 
Sbjct: 1059 CRVRELQRMLDTEKQSRARADQRITESRQVVELAVKEHKAEILALQQALKEQKLKAESLS 1118

Query: 285  KTREQKT 291
                   
Sbjct: 1119 DKLNDLE 1125


>gi|299137319|ref|ZP_07030501.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX8]
 gi|298600724|gb|EFI56880.1| efflux transporter, RND family, MFP subunit [Acidobacterium sp.
           MP5ACTX8]
          Length = 416

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/266 (11%), Positives = 78/266 (29%), Gaps = 54/266 (20%)

Query: 156 GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK--NAVSQ 213
            +  +   +      +     N L L+N+ +   A  ++   +   +K   ++    V+ 
Sbjct: 100 EVPELQAEVAGAQAGITQTQQNILRLQNEVAREEAGYAAVHANYVRLKQASDQQPGLVAA 159

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            +L+        +  ++             +     E                       
Sbjct: 160 QELDDALAKDRSAASQVDAAKSAVAAAHGQLGVSRAENL--------------------- 198

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS------QPLMKIVPHSKL 327
                +++ LE+     TI +P +G I   +   +             Q ++++   S +
Sbjct: 199 -----RVSSLEQ---YATITAPYSGVIT-MRYADTGALIPAGTAEGLNQAVVRLA-QSDV 248

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             +R  V  + +  V  G    V          ++F   + +    +S     +      
Sbjct: 249 LRLRMPVPERDVPFVHVGSVVAVHV----QATGQQFPGTVVRFTRDVSNATRTMM----- 299

Query: 388 EVILKITDLAFSDNNIELRNGFPAEV 413
                 T++  ++  + L  G  A+V
Sbjct: 300 ------TEVDVNNPTLTLTPGMYADV 319



 Score = 42.7 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 55/129 (42%), Gaps = 12/129 (9%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLI-------DLKKVSIKNLRCHIDTEKSA 116
           SG I+   V+ G ++ QG  L   E  E    +          + +I  L+  +  E++ 
Sbjct: 76  SGYIRHIYVDIGDRVRQGQTLAVLEVPELQAEVAGAQAGITQTQQNILRLQNEVAREEAG 135

Query: 117 LDFLNNKYDVLEKAFESRE-----EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
              ++  Y  L++A + +      ++L D L K  S  S+V     +      ++ ++R 
Sbjct: 136 YAAVHANYVRLKQASDQQPGLVAAQELDDALAKDRSAASQVDAAKSAVAAAHGQLGVSRA 195

Query: 172 RSIYLNRLD 180
            ++ ++ L+
Sbjct: 196 ENLRVSSLE 204


>gi|311232716|gb|ADP85570.1| efflux transporter, RND family, MFP subunit [Desulfovibrio vulgaris
           RCH1]
          Length = 461

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 4/91 (4%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +     V  ++S  +G +       G  + +G  L T +       +   +   + 
Sbjct: 71  AVGNVEASATVQ-VRSRITGELTGIHFREGDDVRKGQKLFTIDPRPMEAALREARARQER 129

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            R  +     A D L     ++E  F SRE+
Sbjct: 130 TRAQLT---KAEDDLRRFASLVEGGFVSREQ 157


>gi|288941033|ref|YP_003443273.1| secretion protein HlyD family protein [Allochromatium vinosum DSM
           180]
 gi|288896405|gb|ADC62241.1| secretion protein HlyD family protein [Allochromatium vinosum DSM
           180]
          Length = 409

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 53/162 (32%), Gaps = 8/162 (4%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
             V I    +G + +  V+   ++  G PL   +  E    I+  +  I  +   +   +
Sbjct: 73  RTVTILPERNGRVAETYVDINQRVTAGQPLFRLDSTEQEAAIETARRKIAEIEATMIVAQ 132

Query: 115 SALDFLNNK-------YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           S L   + +              F +R E      G       +     I +   +L   
Sbjct: 133 SQLAEADGRIVQARGGLQQATDEFRARAEVQKRSPGSVAERDVERARVNIETQQGALDAA 192

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           L   R+  ++ ++ +  +    A  +  +  + + K+L    
Sbjct: 193 LAG-RAAVVSEIEFQLPAQKASAEAALREAQIELDKSLIVAG 233



 Score = 36.9 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 16/183 (8%), Positives = 49/183 (26%), Gaps = 17/183 (9%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  +    + +  +    +F    +    +++    ++  I    +  +++ +     + 
Sbjct: 84  RVAETYVDINQRVTAGQPLFRLDSTEQEAAIETARRKIAEIEATMIVAQSQLAEADGRIV 143

Query: 194 SHQKDLTMMKNLFEKNAVSQND--LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
             +  L    + F   A  Q     +  ER V ++ + +          L     +  E 
Sbjct: 144 QARGGLQQATDEFRARAEVQKRSPGSVAERDVERARVNIETQQGALDAALAGRAAVVSEI 203

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
             +           L + Q                 ++  I++   G +         + 
Sbjct: 204 EFQLPAQKASAEAALREAQIEL--------------DKSLIVAGTDGVVQQFALR-PGDV 248

Query: 312 AQQ 314
              
Sbjct: 249 VNP 251


>gi|226293607|gb|EEH49027.1| calmodulin-binding coil-coil protein [Paracoccidioides brasiliensis
           Pb18]
          Length = 1234

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 68/216 (31%), Gaps = 10/216 (4%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG---- 143
           +        + ++  + + +  +   K     L  K   LE      +  L +       
Sbjct: 688 DIASRRQSAESQRQELMSAKEELRVAKREESSLKEKLQGLEDEIVVLQATLEEERAYAGN 747

Query: 144 ------KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                        +  N    ++   L      + ++  +  +LE +   L++ ++  Q 
Sbjct: 748 QHKSSTSELEKQLQSANKERQTIRDKLANANIEIHNLRTSSAELEAERDELQSQINRIQN 807

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +     L ++    +  L + E  + +   E +  +  +  +   ++   D A +E   
Sbjct: 808 QVDDTYRLDQEKIDLRKSLLRFENELSRLKDEKKALLETKDKLQADLDSEIDRAAVEENR 867

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              EI +  ++   T      +L   +   E+  + 
Sbjct: 868 LSAEIDQLQDKLFITSESRNRELISAKSKAERLELR 903



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 76/203 (37%), Gaps = 9/203 (4%)

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            +++S+ +    +   ++ +D L+++ D L+   E +E Q      ++ S    +     
Sbjct: 571 ERELSMNDKDELLLQHRNEIDQLHDEIDSLKHDIEDQEGQHAADRDRWDSMKRNLELQRE 630

Query: 158 SSVYR-----SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL--TMMKNLFEKNA 210
               +         KL  + +    R +               ++ L    +K L +  A
Sbjct: 631 KVEQQVFGYKRTIDKLQGVETTLSGREEKLQNIVDTEKERHLREEQLLNRQIKELNDDIA 690

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +     Q + +  +  ELR    E+ ++   +  L DE  +  A   +E +    Q++
Sbjct: 691 SRRQSAESQRQELMSAKEELRVAKREESSLKEKLQGLEDEIVVLQATLEEERAYAGNQHK 750

Query: 271 RTFADEMSKLTILEKTREQKTIL 293
            + ++   +L    K  E++TI 
Sbjct: 751 SSTSELEKQLQSANK--ERQTIR 771



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 76/238 (31%), Gaps = 33/238 (13%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE-----------KSALDFLNNKYDVLEKA 130
             L   E  +  + ++ K+  +  L+  +DT            +  +  L  +     + 
Sbjct: 292 DTLKELE--QVREELESKENELHELQEELDTLKETKSEQAQQLRDEIQDLQYELRQKNEL 349

Query: 131 FESREEQLLDFLGKYHSTCS---------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +++ +++ +  G  H+  +         +     +  +  SL+   +  R       + 
Sbjct: 350 IDNQRDEIGNLKGNQHNEKNSVSELEAELQRAKQQLEELQNSLEQAKSDARQAKAACDEA 409

Query: 182 ENKSSLLRALLSSHQKDLT--------MMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               +     L   Q ++         + + L EK    + +LN+  +         ++ 
Sbjct: 410 VEAKAQAVDDLKELQDEMADKSFYTKGLSRQLEEKAHKVEEELNKLRKDHSILHENFQDK 469

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKE---ISRDLEQNQRTFADEMSKLTILEKTRE 288
             +       I EL +E + E A    +      + +  +R   D  ++L       +
Sbjct: 470 TRQAAKFKEKIQELNEELSAEKARMQDDLDLAHHERDIARRERDDVSARLLQANDEIQ 527



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 69/228 (30%), Gaps = 9/228 (3%)

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLI-DLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +         +     L   ++I++ +   D+ +     L     + +  L     K   
Sbjct: 505 RDIARRERDDVSA-RLLQANDEIQSGENAKDVLQTRHDALTSESASLQRDLAQAKEKISN 563

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           LEK  E   E  ++   +         +     +         +      +R   ++   
Sbjct: 564 LEKQIEVERELSMNDKDELLLQHRNEIDQLHDEIDSLKHDIEDQEGQHAADRDRWDSMKR 623

Query: 187 LLRALLSSHQKDLTMMKNLFEK-NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            L       ++ +   K   +K   V      ++E++      E   ++ E++ + R I 
Sbjct: 624 NLELQREKVEQQVFGYKRTIDKLQGVETTLSGREEKLQNIVDTEKERHLREEQLLNRQIK 683

Query: 246 ELYDEANLEFANYLKE------ISRDLEQNQRTFADEMSKLTILEKTR 287
           EL D+      +   +         +L   +R  +    KL  LE   
Sbjct: 684 ELNDDIASRRQSAESQRQELMSAKEELRVAKREESSLKEKLQGLEDEI 731



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 56/181 (30%), Gaps = 18/181 (9%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISS-VYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +K+    ++ L D   +     +      +     + L+     + S      +L+ +  
Sbjct: 260 KKSLRRAQQDLADCQLEMQQLQANANRKHVDEDTLKELEQVREELESKENELHELQEELD 319

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI---------------VYKSTLELR 231
            L+   S   + L       +     +N+L   +R                V +   EL+
Sbjct: 320 TLKETKSEQAQQLRDEIQDLQYELRQKNELIDNQRDEIGNLKGNQHNEKNSVSELEAELQ 379

Query: 232 ENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               + + +   + +   +A    A  +   E       + +   DEM+  +   K   +
Sbjct: 380 RAKQQLEELQNSLEQAKSDARQAKAACDEAVEAKAQAVDDLKELQDEMADKSFYTKGLSR 439

Query: 290 K 290
           +
Sbjct: 440 Q 440


>gi|254468853|ref|ZP_05082259.1| secretion protein HlyD [beta proteobacterium KB13]
 gi|207087663|gb|EDZ64946.1| secretion protein HlyD [beta proteobacterium KB13]
          Length = 375

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 73/208 (35%), Gaps = 24/208 (11%)

Query: 210 AVSQNDLNQQERIVYKSTL--ELRENIHEQKNML------RHINELYDEANLEFANYLKE 261
            ++  +L +Q+    KS    EL+   +E+  +L          +L  +  L  A    E
Sbjct: 101 VINSTELAKQQLAYIKSVQMVELKTKAYERAVLLFDADVVSEAQKLQRKTELSSAKADME 160

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI 321
            S+D          E+  +    +      I++ I G I+             ++ +  I
Sbjct: 161 ASKDQLFVMGMTVAEIEAIKSETQIDAITNIVAKIDGKIIKKNVN-VGQVVDPTEDIFTI 219

Query: 322 VPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
              +++  + A++  +QI  +K+G    +  P Y D   K  +  I  +  I+       
Sbjct: 220 AMLNEVWGV-AQIPERQIGFLKEGDDLLIDVPAYED---KLVEGKISYLGDIVDPVTRT- 274

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGF 409
                  V ++       +N+  L+   
Sbjct: 275 -------VTIRT---EIDNNHGLLKPDM 292



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 57/152 (37%), Gaps = 2/152 (1%)

Query: 35  SILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
           + ++PI+ ++   G I  +  ++  I SP  G I +   E G  + QG  L      E  
Sbjct: 49  AKIIPIKRTLDIPGSIEVKQKLLARIGSPVQGRIIEINGELGDPVKQGDVLAVINSTELA 108

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
                   S++ +       + A+  L +   V E     R+ +L        ++  ++F
Sbjct: 109 KQQLAYIKSVQMVELKTKAYERAV-LLFDADVVSEAQKLQRKTELSSAKADMEASKDQLF 167

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
             G++          T++ +I      ++ K 
Sbjct: 168 VMGMTVAEIEAIKSETQIDAITNIVAKIDGKI 199


>gi|220921658|ref|YP_002496959.1| RND family efflux transporter MFP subunit [Methylobacterium
           nodulans ORS 2060]
 gi|219946264|gb|ACL56656.1| efflux transporter, RND family, MFP subunit [Methylobacterium
           nodulans ORS 2060]
          Length = 396

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 61/205 (29%), Gaps = 8/205 (3%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            I      +G ++  D ++         I +  VE G ++ +G  L           +  
Sbjct: 42  EIVERTVVTGTLVPRDEIMVSPEIEGCRITELLVEEGDRVARGAVLARLSREMLDTQLAQ 101

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE-----QLLDFLGKYHSTCSKVF 153
              +I      +D  +S +            A E            + L +   + ++  
Sbjct: 102 NAAAIARAEAAVDQARSTIVQAEAAQVEAALALERTRTLMKSGNATEALLEQRVSAARSA 161

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              +++    L +    +      R +L+ K +          +   + + +    A + 
Sbjct: 162 EGRLAAARNGLSIAEAELLQAKAQRKELDLKLARTEI---RAPEGGIVSRRVARVGATAS 218

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
                  R++ +  +EL   + E  
Sbjct: 219 ASGEPLFRLIARGEIELEGEVTETG 243


>gi|157146442|ref|YP_001453761.1| macrolide transporter subunit MacA [Citrobacter koseri ATCC
           BAA-895]
 gi|157083647|gb|ABV13325.1| hypothetical protein CKO_02202 [Citrobacter koseri ATCC BAA-895]
          Length = 371

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/202 (11%), Positives = 65/202 (32%), Gaps = 15/202 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            + +R   ++  +L      ++  L     +  +     A  +      +          
Sbjct: 111 LRAQRRQAEAEWKLARVTLSRQQQLAKTQAISRQELDTAATEMAVKQAQIGTIDAQIKRN 170

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKV 334
            + L   +   +   I++P+AG +    +          Q   ++ +        ++A+V
Sbjct: 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQV 229

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           +   + H++ G  A   F    D +  +++  ++     +      +    +Y    ++ 
Sbjct: 230 SEADVIHLRPGQKAW--FTVLGDPQT-RYEGALK----DVLPTPEKVNDAIFYYARFEVP 282

Query: 395 DLAFSDNNIELRNGFPAEVLFT 416
               +   I LR    A+V   
Sbjct: 283 ----NPKGI-LRLDMTAQVHIQ 299



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 66/194 (34%), Gaps = 14/194 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ SV ++G++     V ++ +  SG +K   V  G ++ +   L   +  +  + I   
Sbjct: 46  LQQSVLATGKLDALRKV-DVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEV 104

Query: 100 KVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FN 154
           + ++  LR      + E        ++   L K      ++L     +     +++   +
Sbjct: 105 EATLMELRAQRRQAEAEWKLARVTLSRQQQLAKTQAISRQELDTAATEMAVKQAQIGTID 164

Query: 155 YGISSVYRSLKMKLTRMR--SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE----- 207
             I     SL    T +    I         + + L+       +    +  L +     
Sbjct: 165 AQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTML 224

Query: 208 -KNAVSQNDLNQQE 220
            K  VS+ D+    
Sbjct: 225 VKAQVSEADVIHLR 238


>gi|167031769|ref|YP_001667000.1| secretion protein HlyD family protein [Pseudomonas putida GB-1]
 gi|166858257|gb|ABY96664.1| secretion protein HlyD family protein [Pseudomonas putida GB-1]
          Length = 365

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/313 (11%), Positives = 93/313 (29%), Gaps = 23/313 (7%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFS 64
           M        P++  R     ++ I   + W +L   +     + +   +  VV + +  +
Sbjct: 1   MSDTRPAPPPSAPDRGMRWVLLLIAVSLLWYLLA--DRFTPYTQQARLQAYVVPVAAEVA 58

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G IK+  V N  ++ QG  L   +  +    +   +  +  +R  I    + +D      
Sbjct: 59  GQIKRVAVGNNQEVRQGDVLFELDQEQYRIALARAEADLDTVRRQIGASTAGIDSAQAAL 118

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +       +               V    +     +    ++++ +     +    +
Sbjct: 119 VAAQANERKARQDAERLKRLIDEDPGTVSVRRLEGAQATRDQAISQVAAARAEVVRAREQ 178

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
                      Q+D   +++     A +  +  + +        +    I + +  + H 
Sbjct: 179 QGG-------AQEDNAQLRS-----AAANVEKARLDLARTVVRADANGLITDLRTDVGHY 226

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                      + +   IS D+ +N          L  L        +L  + GT++  +
Sbjct: 227 VGAGSPMMTLISIHDVWISADMTENN---------LGRLRPDTPVLVVLDALPGTVLKGR 277

Query: 305 SFSSSNYAQQSQP 317
             S        QP
Sbjct: 278 IRSIGYGVSVGQP 290


>gi|115613067|ref|XP_796563.2| PREDICTED: similar to LOC494846 protein [Strongylocentrotus
           purpuratus]
 gi|115963046|ref|XP_001181278.1| PREDICTED: similar to LOC494846 protein [Strongylocentrotus
           purpuratus]
          Length = 928

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 72/212 (33%), Gaps = 5/212 (2%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
              L  +D++ ++++D+ +  +  L     H+     A      + D L   +  R+ Q 
Sbjct: 638 QTGLDLKDVKASEIMDVYEHKLSALATKESHLQDLLEAKAMALAQADRLIAQYRCRKAQ- 696

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            D   +   +  +            L  K+     +     ++  +   L A+   H++ 
Sbjct: 697 ADNEARKLRSMIQESEKRSEEYRDELSGKMVEKERMAGEMKNMMAQIERLEAVAREHERL 756

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            T    L ++   S  +  + E+    S LEL E + +    L+  +E       E    
Sbjct: 757 TTAHAELGQR-LESLRETLEAEKQERASLLELHEMLTKHSEALKDKHETTIGRLEELEGQ 815

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
            K   + L   +    +   +L   E T  + 
Sbjct: 816 HKGTVKQLRLTEGRLGELQEELNETESTLRKT 847


>gi|16264080|ref|NP_436872.1| putative efflux protein [Sinorhizobium meliloti 1021]
 gi|307300067|ref|ZP_07579852.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           BL225C]
 gi|15140205|emb|CAC48732.1| putative efflux transmembrane protein [Sinorhizobium meliloti 1021]
 gi|306904956|gb|EFN35539.1| efflux transporter, RND family, MFP subunit [Sinorhizobium meliloti
           BL225C]
          Length = 384

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 56/202 (27%), Gaps = 29/202 (14%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++ +L   E+ V  + L       + +           +A L+ A  L +      Q   
Sbjct: 110 AEANLLAAEKQVQTTAL------AKLRAEQLFTKSFSSQAQLDQATLLYD------QAVS 157

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           T     S L+  +       + +   G +    +           P++  V       + 
Sbjct: 158 TRDAAASSLSQAKNQVSYTDLKADQNGIVTAVNAD-IGQVVGTGTPVVT-VAVDGEKEVE 215

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             V    +   K G    VRF              + ++     Q+         + V +
Sbjct: 216 IAVPEIDVTEFKPGKPVGVRF---WSNDMLVLDGHVREVSGSADQRSRT------FSVRV 266

Query: 392 KITDLAFSDNNIELRNGFPAEV 413
            +       N+  +  G  A V
Sbjct: 267 SL------PNDERVLLGMTATV 282



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/102 (11%), Positives = 29/102 (28%), Gaps = 2/102 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I +  V  G ++  G  L   +  +    +   + ++      + T  +AL  L  +
Sbjct: 75  GGKITERLVNIGDRVKPGDILARIDATDYRLAVTSAEANLLAAEKQVQT--TALAKLRAE 132

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
               +      +      L     +        +S     + 
Sbjct: 133 QLFTKSFSSQAQLDQATLLYDQAVSTRDAAASSLSQAKNQVS 174


>gi|87123239|ref|ZP_01079090.1| hypothetical protein RS9917_05250 [Synechococcus sp. RS9917]
 gi|86168959|gb|EAQ70215.1| hypothetical protein RS9917_05250 [Synechococcus sp. RS9917]
          Length = 377

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 12/132 (9%)

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADE----MSKLTILEKTREQKTILSPIAGTIVY 302
             D+ N E   +L +      + +  +A +      +          K + SPI G +  
Sbjct: 104 RTDKLNAERYEFLYKQGAASAKTRDQYATQAIASRDQALASAANLGYKYVRSPIDGVVGD 163

Query: 303 NQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
             +    +Y +  Q +  IV  +   +   ++   Q   VK G T +V     +      
Sbjct: 164 LDTVKLGDYVKTGQAITGIV-DNSTLWTLMQIPATQAGRVKVGQTVSV-----SSQTTPP 217

Query: 363 FKAI--IEKIDP 372
                 +  I P
Sbjct: 218 ITGEGSVTFISP 229



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/83 (13%), Positives = 31/83 (37%), Gaps = 4/83 (4%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT----EKSALDFL 120
           G + K     G ++  G P+L  ++++ +  ++  +   +  + + +      K      
Sbjct: 65  GRVVKIIATEGQRVKAGQPILVLDNVQQSAALNAARAQARTDKLNAERYEFLYKQGAASA 124

Query: 121 NNKYDVLEKAFESREEQLLDFLG 143
             +     +A  SR++ L     
Sbjct: 125 KTRDQYATQAIASRDQALASAAN 147


>gi|311263397|ref|XP_003129667.1| PREDICTED: nuclear mitotic apparatus protein 1-like [Sus scrofa]
          Length = 2108

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 68/212 (32%), Gaps = 8/212 (3%)

Query: 79  LQGTPLLTFEDIET-TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
            +G  L     +ET              L+  ++  ++       K       FE  ++Q
Sbjct: 403 EKGEVLGDILQLETLKQEAATLAADNTQLQARVEALETERSQREAKLLAERSHFEEEKQQ 462

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L   + +   + S +          S      +   +      L ++   L A L    +
Sbjct: 463 LAGLIAELQGSLSSLSRAKEELEEAS----QAQGARLSAQAAALTSELEALNAALQQRDQ 518

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +L  +K   +          QQ+    +    LR+ + +  + L+     ++EA  E   
Sbjct: 519 ELASLKQQAQTEQAQLAHSLQQQEQASQG---LRQQVEQLSSSLKQKERQWEEAAKEQEA 575

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             +E ++ L       A    +L  LEK +  
Sbjct: 576 ARREHAQQLAAVAEERAAARQQLEALEKEKAA 607



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 62/219 (28%), Gaps = 17/219 (7%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +  G   L  E       ++ ++  I  L     +          + +  +   +  E
Sbjct: 695 ESLKVGQGRLEEETRRAAGALEEQQRCICRLEAETRSLAEQRKQEQKELEEEKAGRKGLE 754

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +L            +       ++ + L   L   R        L  + +  R      
Sbjct: 755 ARL--------QQLGEAHQAKTEALRQELAEALASRREAESECEQLAKEVATWRERYEDS 806

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q++        +  A+ Q  L   +    K+  EL+E   +   +  H          E 
Sbjct: 807 QQEE------AQYGAMVQEQLLTLKEECEKARQELQEAKEKVAGIEAHSELQISRQQSEL 860

Query: 256 ANYLKEISRDLEQNQRT---FADEMSKLTILEKTREQKT 291
           A     ++R L+Q Q            L+ L++     +
Sbjct: 861 AQLHASLARALQQVQEKEARAQKLADDLSALQEKMAATS 899



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 75/215 (34%), Gaps = 17/215 (7%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           + ++        ++    H+   + AL+ L +++    + +  ++ QL   LG       
Sbjct: 314 QLSEENGDLSFKLREFASHLQQLQGALNDLTDEHSKASREWVEKQAQLEKELGAALQDKK 373

Query: 151 --KVFNYGISSVYRSLKMKLTRMRS-----------IYLNRLDLENKSSLLRA---LLSS 194
             +  N  +      L+  L ++R              L    L+ +++ L A    L +
Sbjct: 374 CLEEKNEILQGKLSQLEEHLAQLRENPPREKGEVLGDILQLETLKQEAATLAADNTQLQA 433

Query: 195 HQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             + L   ++  E   ++ ++   ++++ +     EL+ ++         + E       
Sbjct: 434 RVEALETERSQREAKLLAERSHFEEEKQQLAGLIAELQGSLSSLSRAKEELEEASQAQGA 493

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             +     ++ +LE           +L  L++  +
Sbjct: 494 RLSAQAAALTSELEALNAALQQRDQELASLKQQAQ 528



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 70/214 (32%), Gaps = 7/214 (3%)

Query: 67   IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
            +K+       +  +    L     ET             LR  + T +   +      + 
Sbjct: 1248 LKRLVAAESEKSQKLEERLRLLQAETASSSARAAERSSALREEVQTLREEAEKQRVASES 1307

Query: 127  LEKAFESREEQLLDFLGKYHSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
            L +   S+ E+  +   +  +   K F     +S++          +  +   +   +  
Sbjct: 1308 LRQELASQAERAEELGQELKAWQEKFFQKEQALSALQLEHTSTQALLSELLPAKHLCQQL 1367

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             +   A    H+++L   K         + +L + +R + +    LR+ + EQ+   + +
Sbjct: 1368 QAEQAAAEKRHREELEQSKQ-AAGGL--RAELMRAQRELGELVP-LRQKVAEQERAAQQL 1423

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                  +  E  + LK+    L +  R   +  S
Sbjct: 1424 RAEKA-SYAEQLSMLKKAHGLLAEENRGLGERAS 1456



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 63/198 (31%), Gaps = 4/198 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
               + ++  K +   LR  +   +  L  L      + +  E   +QL      Y    S
Sbjct: 1377 RHREELEQSKQAAGGLRAELMRAQRELGELVPLRQKVAEQ-ERAAQQLRAEKASYAEQLS 1435

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             +       +       L    S+    L++E   +  +               L E   
Sbjct: 1436 MLKKAH--GLLAEENRGLGERASLGRQFLEVELDQAREKYGQELAAVRADAETRLAEMQR 1493

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +Q+   + E +  K      + + E++       +L  +   +   + +E ++ +E+  
Sbjct: 1494 EAQSTARELEVMTAKYEGAKVKVLEERQRFQEERQKLTAQVE-QLEVFQREQTKQVEELS 1552

Query: 271  RTFADEMSKLTILEKTRE 288
            +  AD      + ++  +
Sbjct: 1553 KKLADHDHASKVQQQKLK 1570



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/208 (10%), Positives = 57/208 (27%), Gaps = 21/208 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST---- 148
              +  +   + +L+    TE++ L     + +   +    + EQL   L +        
Sbjct: 510 NAALQQRDQELASLKQQAQTEQAQLAHSLQQQEQASQGLRQQVEQLSSSLKQKERQWEEA 569

Query: 149 ---CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                         +    + +    + +     +      +L+  L    +     +  
Sbjct: 570 AKEQEAARREHAQQLAAVAEERAAARQQLEALEKEKAAALEVLQQQLQVASEARDGAQTS 629

Query: 206 FEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
             +    + +L               Q++        EL+  +  ++       ++  E 
Sbjct: 630 VAQAQREKAELSQKVEELHACVEAARQEQCEAQAQVAELKAQLRSEQQKATENEKMVQEQ 689

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSK 279
                  LK     LE+  R  A  + +
Sbjct: 690 VRALEESLKVGQGRLEEETRRAAGALEE 717


>gi|289164042|ref|YP_003454180.1| HlyD family secretion protein [Legionella longbeachae NSW150]
 gi|288857215|emb|CBJ11036.1| putative HlyD family secretion protein [Legionella longbeachae
           NSW150]
          Length = 336

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 73/208 (35%), Gaps = 25/208 (12%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             S LE+R   ++  ++ + ++ L  +  +E         + + Q ++      ++    
Sbjct: 140 ALSKLEVRTLDYDLHSLEQKMDSLKKQIAIE--------DQQIIQQRKLIKALKAEKHNA 191

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
               +  T+ +P  G +V N    +    +  +PL   +  +   +++A +    ++ V+
Sbjct: 192 RVNLDLTTVRAPADG-VVDNLYIGAGTPVKIHEPLFSFI-DTSKWWVQANLYETDLRRVR 249

Query: 344 KGYTA--TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT----------QEYYEVIL 391
            G      +R  ++  I   +    I   D   +      Q            + + + +
Sbjct: 250 PGDKVYIMLRMYYFNKIFHGRIVNTIWAADRQTTDPRTQQQKVGSNNQWLLEPQRFPIQI 309

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +I D    D    L  G  A V    ++
Sbjct: 310 EILDP---DPKYPLHPGASAYVYIKTRS 334



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 53/156 (33%), Gaps = 16/156 (10%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              NV  + +  SG I K  V NGS + +  PL               +++ +  +   +
Sbjct: 43  VVTNVTPVAADVSGFITKIYVHNGSIVKKDQPLFEV-------YQKSYRLTYEYAKARYE 95

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
               +L  +N +    E    + +        +Y    +      +S +          +
Sbjct: 96  EAIESLKVINRQTQKTETLLAAAKYAYEKAKFEYQLKKAPSVREALSKL---------EV 146

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           R++  +   LE K   L+  ++   + +   + L +
Sbjct: 147 RTLDYDLHSLEQKMDSLKKQIAIEDQQIIQQRKLIK 182


>gi|254712677|ref|ZP_05174488.1| RND family efflux transporter MFP subunit [Brucella ceti M644/93/1]
 gi|254715747|ref|ZP_05177558.1| RND family efflux transporter MFP subunit [Brucella ceti M13/05/1]
 gi|261217506|ref|ZP_05931787.1| efflux transporter [Brucella ceti M13/05/1]
 gi|261320381|ref|ZP_05959578.1| efflux transporter [Brucella ceti M644/93/1]
 gi|260922595|gb|EEX89163.1| efflux transporter [Brucella ceti M13/05/1]
 gi|261293071|gb|EEX96567.1| efflux transporter [Brucella ceti M644/93/1]
          Length = 372

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 97  RIDDVEQRANMRVAQASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 157 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 216 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 263



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 58  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 110

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + S+      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 111 QASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 170

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 171 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 227

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 228 IGMGVTVALLADPSIEAEGNIRELS 252


>gi|222106686|ref|YP_002547477.1| RND multidrug efflux membrane permease [Agrobacterium vitis S4]
 gi|221737865|gb|ACM38761.1| RND multidrug efflux membrane permease [Agrobacterium vitis S4]
          Length = 386

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 72/195 (36%), Gaps = 6/195 (3%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + L PI  +   +G +  +D+V  + +  +G +++   + GS++ +G  L   E      
Sbjct: 40  AKLKPINDTTEVNGRVEAKDSVNLV-ARVTGFLEEQLFKEGSEVKKGQVLFRIERQSYEA 98

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +D KK ++   +  ++    +L     + + L       +  L D      ++ +KV  
Sbjct: 99  DLDSKKATLAENQATLENSNISL----ARNEQLRAGGSGSQSNLDDARATQRTSIAKVAE 154

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLEN-KSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                    + +  T + +    R+ L +     + +  S     +     ++ K  +S 
Sbjct: 155 SEADVRTSQINLGYTDIIAPIDGRIGLASVTVGNVVSSSSGTLATVVSQDPMYVKFPISV 214

Query: 214 NDLNQQERIVYKSTL 228
             L +  +   K   
Sbjct: 215 RRLIELRQRFDKEGG 229



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 57/164 (34%), Gaps = 6/164 (3%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLELRENIHE 236
           R++ ++  +L+  +    ++ L    +  +K  V  + +    E  +      L EN   
Sbjct: 54  RVEAKDSVNLVARVTGFLEEQLFKEGSEVKKGQVLFRIERQSYEADLDSKKATLAENQAT 113

Query: 237 QKNMLRHI--NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            +N    +  NE          + L +       +    A+  + +   +       I++
Sbjct: 114 LENSNISLARNEQLRAGGSGSQSNLDDARATQRTSIAKVAESEADVRTSQINLGYTDIIA 173

Query: 295 PIAGTIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTPK 337
           PI G I    S +  N     S  L  +V      Y++  ++ +
Sbjct: 174 PIDGRI-GLASVTVGNVVSSSSGTLATVV-SQDPMYVKFPISVR 215


>gi|163733885|ref|ZP_02141327.1| efflux transporter, RND family, MFP subunit [Roseobacter litoralis
           Och 149]
 gi|161392996|gb|EDQ17323.1| efflux transporter, RND family, MFP subunit [Roseobacter litoralis
           Och 149]
          Length = 375

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 49/145 (33%), Gaps = 13/145 (8%)

Query: 215 DLNQQERIVYKSTLELRENIHEQK-----NMLRHINELYDEANLEFANY------LKEIS 263
           D+  ++     S       I E +     N L  I  L + A+   + +      L E +
Sbjct: 97  DILARQAQARLSEARAGIVIAETRVNRAANALARIEGLRNTASFSTSRFDDAQSDLFEAN 156

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L + Q       + L       ++  I +P AG ++  Q      +      ++ ++ 
Sbjct: 157 GLLAEAQARVQTAEANLAETRYQLDRARITAPYAGIVLEVQIN-PGEFIASGSAVVTLL- 214

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTA 348
                 I A V  K +  ++ G T 
Sbjct: 215 DVLSMEIEASVPSKYVSVLQPGQTV 239



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 42/139 (30%), Gaps = 10/139 (7%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC-- 108
           +       I S  +G + +  V  G+ + QG  L T +      L    +  +   R   
Sbjct: 55  VVTVREGTIASRIAGTVDEIMVLEGTAVGQGEMLATLDTELLDILARQAQARLSEARAGI 114

Query: 109 --------HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
                         + ++ L N        F+  +  L +  G      ++V     +  
Sbjct: 115 VIAETRVNRAANALARIEGLRNTASFSTSRFDDAQSDLFEANGLLAEAQARVQTAEANLA 174

Query: 161 YRSLKMKLTRMRSIYLNRL 179
               ++   R+ + Y   +
Sbjct: 175 ETRYQLDRARITAPYAGIV 193


>gi|149914180|ref|ZP_01902711.1| Cation/multidrug efflux pump, membrane-fusion protein [Roseobacter
           sp. AzwK-3b]
 gi|149811699|gb|EDM71532.1| Cation/multidrug efflux pump, membrane-fusion protein [Roseobacter
           sp. AzwK-3b]
          Length = 370

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 58/159 (36%), Gaps = 6/159 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +       E++   +GII +   + G+ +    PL   +       +   +  +   
Sbjct: 41  PGRVAASAQA-EVRPQVNGIITERLFQEGAHVDANDPLYRIDSATYDAAVQQARAGVSQA 99

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           +  +   +   + L      L+    + E+ L D      S  + +           +++
Sbjct: 100 QAQLGAAEREAERLKE----LQARNVASEQALDDAQSARDSALAALELARAQLNAAEIEL 155

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             T +R+    R+ L +++S    + +S  + L +++ +
Sbjct: 156 SRTTIRARLSGRIGL-SQTSEGELVTASQAQPLAVIRKI 193


>gi|21429746|gb|AAM50551.1| AT16851p [Drosophila melanogaster]
          Length = 1230

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 73/206 (35%), Gaps = 2/206 (0%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +       +  K  SI+ +   ++ +  AL  L ++   L+   +  +E+L         
Sbjct: 813  DLTRLQMALQEKDCSIRQMAERLENQNRALTQLEDRCTALKSTVDQLKERLQKSAVSETQ 872

Query: 148  TCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               ++      +S      +    +++ +  +    EN+  +L   L S Q +L  ++  
Sbjct: 873  LRGEIKTLQKELSEQGHCSQANEDKLKLVQKSLQTAENEKRILTERLDSAQTNLNELRRS 932

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             +        L +Q   +      L   +   K       +          N  +E+SR 
Sbjct: 933  QQAQLDGNQRLQEQVTDLEVQRSALESQLRIAKWNQESGGDKDLTNGNGGGNGEEELSRQ 992

Query: 266  LEQNQRTFADEMSKLTILEKTREQKT 291
            L+ +QR  ++  SKL  L+   +Q  
Sbjct: 993  LKSSQREKSELRSKLQTLQDKVKQLE 1018



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 67/206 (32%), Gaps = 7/206 (3%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           +   +          ++   + L      E      + N     E+A +   E++L    
Sbjct: 110 VARLQKELEQCQRKAQETKTQLLNAARAAESDFNQKIANLQACAEEAAKRHGEEILQLRN 169

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK--SSLLRALLSSHQKDLTM 201
                  +      ++    ++    R+ ++  +   L  +   +L+RA     Q  L  
Sbjct: 170 ALEKRMQQALQALQTAKDDEIEKLQERLATLQAHLESLVQQHEEALIRAESEKQQALLIA 229

Query: 202 MKN----LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            ++         AVS++   +QE  + +S  E      +Q+  +  + +   +   +   
Sbjct: 230 HRDKQAVAERLEAVSRDLKTEQE-SLDRSRREANARDEKQRAAIAQLKDEMVQMRTKEEE 288

Query: 258 YLKEISRDLEQNQRTFADEMSKLTIL 283
           +  ++   + + +   +    +   L
Sbjct: 289 HKIKLEECIRKQELQLSSLREERESL 314



 Score = 36.5 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 71/208 (34%), Gaps = 8/208 (3%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L+  E  +   L+   +   + +   ++     L       D   +   +R+E+    + 
Sbjct: 215 LIRAESEKQQALLIAHRDK-QAVAERLEAVSRDLKTEQESLDRSRREANARDEKQRAAIA 273

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +      ++     +            +R   L    L  +   L  +    + ++ + +
Sbjct: 274 QLKDEMVQM----RTKEEEHKIKLEECIRKQELQLSSLREERESLCRVSEELKMEIRLKE 329

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE---ANLEFANYLK 260
           +  E       D  ++ +        LR+ + + +  L   N   D+   +N E  +++K
Sbjct: 330 DRMESTNNELQDALRKSKEGEGFIDSLRKELTDCRRQLADSNIERDKYSGSNKELRDHVK 389

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTRE 288
            +     +  R   + + K++ LE T+ 
Sbjct: 390 RVESAKREQARAIEEALQKISNLEDTKN 417


>gi|212451|gb|AAA48987.1| nonmuscle myosin heavy chain [Gallus gallus]
          Length = 1997

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 16/213 (7%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ E   L+  N+K+   +K  E R  +    L +       
Sbjct: 986  ARQKLQLEKVTAEAKIKKMEEEILLLEDQNSKFLKEKKLMEDRIAECTSQLAEEEEKAKN 1045

Query: 152  V-------------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +                 +    ++ +      R +     DL+++ + L+A +   +  
Sbjct: 1046 LAKLKNKQEMMITDLEERLKKEEKTRQELEKAKRKLDGETTDLQDQIAELQAQIEELKIQ 1105

Query: 199  LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            L   +   +      ++   Q+    K   EL+  I E +  L       ++A  +  + 
Sbjct: 1106 LAKKEEELQAALARGDEEAVQKNNALKVIRELQAQIAELQEDLESEKASRNKAEKQKRDL 1165

Query: 259  LKEISR---DLEQNQRTFADEMSKLTILEKTRE 288
             +E+     +LE    T A +    T  E+   
Sbjct: 1166 SEELEALKTELEDTLDTTAAQQELRTKREQEVA 1198



 Score = 43.1 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 72/207 (34%), Gaps = 5/207 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            ++   ++ +   ++     ++ E  A +    + +V  +A +++ E+ L    + +    
Sbjct: 1553 KSKRTLEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQARDEQNEEKK 1612

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLFEKN 209
            ++    +  +   L+ +  +       +  +E     L   + +  K     +K L +  
Sbjct: 1613 RMLVKQVRELEAELEDERKQRALAVAAKKKMEMDLKDLEGQIEAANKARDEAIKQLRKLQ 1672

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA---NYLKEISRDL 266
            A    D  ++      S  E+     E +  L+ +     +   EFA      +   ++ 
Sbjct: 1673 A-QMKDYQRELEEARASRDEIFAQSKESEKKLKGLEAEILQLQEEFAASERARRHAEQER 1731

Query: 267  EQNQRTFADEMSKLTILEKTREQKTIL 293
            ++     A+  S  + L   + +    
Sbjct: 1732 DELADEIANSASGKSALLDEKRRLEAR 1758



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 66/211 (31%), Gaps = 5/211 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            T +       +  K+            E++       +      A    E        K 
Sbjct: 1179 TLDTTAAQQELRTKREQEVAELKKAIEEETKNHEAQIQEIRQRHATALEELSEQLEQAKR 1238

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-N 204
                 +    G+ S  + L  ++  ++ +         K       L++   +   ++  
Sbjct: 1239 FKANLEKNKQGLESDNKELACEVKVLQQVKAESEHKRKKLDAQVQELTAKVTEGERLRVE 1298

Query: 205  LFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            L EK    QN+L+          K  ++  ++    ++ L+   EL  E   +  N    
Sbjct: 1299 LAEKANKLQNELDNVSSLLEEAEKKGIKFAKDAASLESQLQDTQELLQEETRQKLNLSSR 1358

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            I R LE+ +    ++  +     K  E++ +
Sbjct: 1359 I-RQLEEEKNNLQEQQEEEEEARKNLEKQML 1388



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 77/207 (37%), Gaps = 7/207 (3%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  +  +     D    ++  L     T +  ++ +  + + LE   ++ E+  L     
Sbjct: 1530 LRADMEDLMSSKDDVGKNVHELEKSKRTLEQQVEEMRTQLEELEDELQATEDAKLRLEVN 1589

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK---DLTM 201
              +  ++      +   ++ + K   ++ +     +LE++       +++ +K   DL  
Sbjct: 1590 MQAMKAQFERDLQARDEQNEEKKRMLVKQVRELEAELEDERKQRALAVAAKKKMEMDLKD 1649

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            ++   E    ++++  +Q R +     + +  + E +     I     E+  +    LK 
Sbjct: 1650 LEGQIEAANKARDEAIKQLRKLQAQMKDYQRELEEARASRDEIFAQSKESEKK----LKG 1705

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTRE 288
            +  ++ Q Q  FA         E+ R+
Sbjct: 1706 LEAEILQLQEEFAASERARRHAEQERD 1732



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                D      KN+      E+   +    + +    +  +R  +      +     +K 
Sbjct: 1471 QKKFDQMLAEEKNISARYAEERDRAEAEAREKETKALSL-ARALEEALEAKEEFERQNKQ 1529

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM----------- 201
                +  +  S       +  +  ++  LE +   +R  L   + +L             
Sbjct: 1530 LRADMEDLMSSKDDVGKNVHELEKSKRTLEQQVEEMRTQLEELEDELQATEDAKLRLEVN 1589

Query: 202  ---MKNLFEKNAVSQNDLNQQER-----IVYKSTLELRENIHEQKNMLRHINELY----- 248
               MK  FE++  ++++ N++++      V +   EL +   ++   +    ++      
Sbjct: 1590 MQAMKAQFERDLQARDEQNEEKKRMLVKQVRELEAELEDERKQRALAVAAKKKMEMDLKD 1649

Query: 249  DEANLEFANYLK-EISRDLEQNQRTFADEMSKLTILEKTRE 288
             E  +E AN  + E  + L + Q    D   +L     +R+
Sbjct: 1650 LEGQIEAANKARDEAIKQLRKLQAQMKDYQRELEEARASRD 1690


>gi|323168803|gb|EFZ54483.1| efflux transporter, RND family, MFP subunit [Shigella sonnei 53G]
          Length = 413

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I+   N V ++S   G +     + G Q+  G  L   +  
Sbjct: 62  AATA-VEQAVPRYLTGLGTIIAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 119

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 120 QFKVALAQTQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 175

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 176 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 208



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 120 QFKVALAQTQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 179

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 180 DEASVASAQLQLD 192


>gi|301643528|ref|ZP_07243572.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           146-1]
 gi|301078101|gb|EFK92907.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           146-1]
          Length = 415

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I+   N V ++S   G +     + G Q+  G  L   +  
Sbjct: 64  AATA-VEQAVPRYLTGLGTIIAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 121

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 122 QFKVALAQTQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 177

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 178 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 210



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 122 QFKVALAQTQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 181

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 182 DEASVASAQLQLD 194


>gi|298708271|emb|CBJ48334.1| hypothetical protein Esi_0002_0078 [Ectocarpus siliculosus]
          Length = 1024

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 62/196 (31%), Gaps = 9/196 (4%)

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           ++   +  LR  +  E  A + L       E     RE +     G+      +      
Sbjct: 351 IQNAGVDELRDRLLAELEAKEELAR-----ELEDSRREAEEHQERGEQREGEVEGLLERE 405

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           +   R+       +  + ++   LE + S L       +   T    L  ++A  +    
Sbjct: 406 ADERRARGEAEAELEQLRVSHRALEEQLSALGEKAKGLEGRST---ELERRSAQLEEKTA 462

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
            QER + +   EL +   E +     + E   E     A  L E    L + +    ++ 
Sbjct: 463 GQEREISRRAAELDKVSAELEQRSSELGEARAELGDTGA-RLGETQVVLGETRGALGEKA 521

Query: 278 SKLTILEKTREQKTIL 293
           + L       E++   
Sbjct: 522 AALERALSQLEEREAR 537


>gi|294673956|ref|YP_003574572.1| hypothetical protein PRU_1257 [Prevotella ruminicola 23]
 gi|294471962|gb|ADE81351.1| conserved hypothetical protein [Prevotella ruminicola 23]
          Length = 330

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/247 (11%), Positives = 78/247 (31%), Gaps = 17/247 (6%)

Query: 5   MWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISV-SSSGEILNEDNVVEIKSPF 63
           M +  KR H   L  + +L    ++ ++       ++       G++   +    + S  
Sbjct: 1   MTEQAKRQHNNIL--LAILGFATVVVIVALIGFFALDRDPDIIQGQVEVTEYR--VSSKV 56

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G I + +V+ G  +  G  L   +  E    ++  + +           ++       +
Sbjct: 57  PGRILELRVKEGDYVKVGDTLAILDAPEVRAKMEQAQSAESAAAALELKAQNGA-----R 111

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            + ++ AF   ++       K     ++     +  ++    M   +    + N   +E 
Sbjct: 112 KEQIQGAFSVLQQ------AKAGLEIAEKSYNRVQRLFDEGVMSAQKRDEAFANYKAMEA 165

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE-RIVYKSTLELRENIHEQKNMLR 242
           +    ++              +     V +     QE       T+++ +   E  ++  
Sbjct: 166 QVKAAQSQYDMAVNGARREDKMAAAAQVGRARGAVQEVNSYIHETVQVAQMEGEVSDVYP 225

Query: 243 HINELYD 249
            + EL  
Sbjct: 226 KVGELVG 232


>gi|242240602|ref|YP_002988783.1| efflux transporter RND family, MFP subunit [Dickeya dadantii
           Ech703]
 gi|242132659|gb|ACS86961.1| efflux transporter, RND family, MFP subunit [Dickeya dadantii
           Ech703]
          Length = 387

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 58/188 (30%), Gaps = 9/188 (4%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  +++    +    L    +   L A +    +  T+  +      +    + +    
Sbjct: 44  SVGAQVSGQIKVLPVSLGDRVQKGQLLAEIDDLTQQNTLKDSEAALQNIQAQRIAKLATQ 103

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
                   R+ +  QK +    +    +A L+          ++             +  
Sbjct: 104 RNNQLGWQRQQMLMQKGVGAQADYDSAKATLDTTQ------AEIAALDAQIIQAKIAVNT 157

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNY--AQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +       I+SPI GTIV             Q +  + K V +     I AK++   + 
Sbjct: 158 AQVNLGYTKIVSPIDGTIVALPVEQGQTVNAVQSAPTIAK-VANLSTMTIEAKISEADVI 216

Query: 341 HVKKGYTA 348
           +V+ G   
Sbjct: 217 NVRPGMPV 224



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 52/138 (37%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +E +V + G + N   +V + +  SG IK   V  G ++ +G  L   +D+   + +   
Sbjct: 27  LEQTVLADGTV-NAKKLVSVGAQVSGQIKVLPVSLGDRVQKGQLLAEIDDLTQQNTLKDS 85

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + +++N++     + +     NN+     +    ++                     I++
Sbjct: 86  EAALQNIQAQRIAKLA--TQRNNQLGWQRQQMLMQKGVGAQADYDSAKATLDTTQAEIAA 143

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   +      + +  +N
Sbjct: 144 LDAQIIQAKIAVNTAQVN 161


>gi|238897763|ref|YP_002923442.1| ABC-type antimicrobial peptide transport system, membrane fusion
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229465520|gb|ACQ67294.1| ABC-type antimicrobial peptide transport system, membrane fusion
           [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 378

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 76/219 (34%), Gaps = 24/219 (10%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQN 269
           ++N + +    +     +  +   E+K  L  +N   + A L+      + +   DL   
Sbjct: 100 AKNQIKEVAAALEDLNAQSAQAEAEKKLTLLTLNRQKNLARLKLISPQDIDQTETDLAVR 159

Query: 270 QRTFADEMSK-------LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           +       ++       L       E   I +P++G +V   +         +Q +  I+
Sbjct: 160 KAKIEMIKAQINRTRISLDTANLNLEYTKISAPMSGEVVQITTL-EGQTVIATQQVPNIL 218

Query: 323 PHSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
             +      +  +V+   I H+K G    + F    D   K F+ +++ I P       +
Sbjct: 219 TLADMSTMLVNTQVSEADIIHLKPGLK--ISFTILGDPN-KHFEGVLKDIQP----TPES 271

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +    +Y    ++ +   S   + L+    A+V      
Sbjct: 272 INDAIFYSARFEVPN---SKGLLRLK--MTAQVSIQLAE 305



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 66/178 (37%), Gaps = 14/178 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV ++G++     V ++ +  SG ++   V+ G ++ QG  L   +  +  + I   
Sbjct: 49  IVQSVLATGKLDALRKV-DVGAQVSGQLQHLYVKIGDKVKQGQLLGMIDPQKAKNQIKEV 107

Query: 100 KVSIKNL---RCHIDTEKSALDFLNNKYDVLEKA-------FESREEQLLDFLGKYHSTC 149
             ++++L       + EK       N+   L +         +  E  L     K     
Sbjct: 108 AAALEDLNAQSAQAEAEKKLTLLTLNRQKNLARLKLISPQDIDQTETDLAVRKAKIEMIK 167

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           +++    IS    +L ++ T++ +     +    + + L        + +  +  L +
Sbjct: 168 AQINRTRISLDTANLNLEYTKISAPMSGEV---VQITTLEGQTVIATQQVPNILTLAD 222


>gi|225678771|gb|EEH17055.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 1260

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/216 (11%), Positives = 68/216 (31%), Gaps = 10/216 (4%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG---- 143
           +        + ++  + + +  +   K     L  K   LE      +  L +       
Sbjct: 714 DIASRRQSAESQRQELMSAKEELRVAKREESSLKEKLQGLEDEIVVLQATLEEERAYAGN 773

Query: 144 ------KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                        +  N    ++   L      + ++  +  +LE +   L++ ++  Q 
Sbjct: 774 QHKSSTSELEKQLQSANKERQTIRDKLANANIEIHNLRTSSAELEAERDELQSQINRIQN 833

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +     L ++    +  L + E  + +   E +  +  +  +   ++   D A +E   
Sbjct: 834 QVDDTYRLDQEKIDLRKSLLRFENELSRLKDEKKALLETKDKLQADLDSEIDRAAVEENR 893

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              EI +  ++   T      +L   +   E+  + 
Sbjct: 894 LSAEIDQLQDKLFITSESRNRELISAKSKAERLELR 929



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 83/229 (36%), Gaps = 27/229 (11%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCH--------IDTEKSALDFLNNKYDVLEKAFESREE 136
           L  +  +  + I   +  I+  R          +   ++ +D L+++ D L+   E +E 
Sbjct: 576 LQRDLAQAKEKISNLEKQIEVERERSMNDKDELLLQHRNEIDQLHDEIDSLKHDIEDQEG 635

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYR------------SLKMKLTRMRSIYLNRLDLENK 184
           Q      ++ S    +         +             ++  L+       N +D E +
Sbjct: 636 QHAADRDRWDSMKRNLELQREKVEQQVFGYKRTIDKLQGVETTLSGREEKLQNIVDSEKE 695

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             L    L + Q     +K L +  A  +     Q + +  +  ELR    E+ ++   +
Sbjct: 696 RHLREEQLLNRQ-----IKELNDDIASRRQSAESQRQELMSAKEELRVAKREESSLKEKL 750

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
             L DE  +  A   +E +    Q++ + ++   +L    K  E++TI 
Sbjct: 751 QGLEDEIVVLQATLEEERAYAGNQHKSSTSELEKQLQSANK--ERQTIR 797



 Score = 43.1 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 28/238 (11%), Positives = 76/238 (31%), Gaps = 33/238 (13%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE-----------KSALDFLNNKYDVLEKA 130
             L   E  +  + ++ K+  +  L+  +DT            +  +  L  +     + 
Sbjct: 318 DTLKELE--QVREELESKENELHELQEELDTLKETKSEQAQQLRDEIQDLQYELRQKNEL 375

Query: 131 FESREEQLLDFLGKYHSTCS---------KVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +++ +++ +  G  H+  +         +     +  +  SL+   +  R       + 
Sbjct: 376 IDNQRDEIGNLKGNQHNEKNSVSELEAELQRAKQQLEELQNSLEQAKSDARQAKAACDEA 435

Query: 182 ENKSSLLRALLSSHQKDLT--------MMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
               +     L   Q ++         + + L EK    + +LN+  +         ++ 
Sbjct: 436 VEAKAQAVDDLKELQDEMADKSFYTKGLSRQLEEKAHKVEEELNKLRKDHSILHENFQDK 495

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKE---ISRDLEQNQRTFADEMSKLTILEKTRE 288
             +       I EL +E + E A    +      + +  +R   D  ++L       +
Sbjct: 496 TRQAAKFKEKIQELNEELSAEKARMQDDLDLAHHERDIARRERDDVSARLLQANDEIQ 553



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 71/227 (31%), Gaps = 24/227 (10%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +         ++  D I   + +   L+   D   S    L       ++   + E+Q+
Sbjct: 537 ERDDVSARL--LQANDEIQSGENAKNVLQTRHDALTSESASLQRDLAQAKEKISNLEKQI 594

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
                +  +   ++           +      + S+  +  D E + +  R    S +++
Sbjct: 595 EVERERSMNDKDELLLQH----RNEIDQLHDEIDSLKHDIEDQEGQHAADRDRWDSMKRN 650

Query: 199 LTMMKNLFEKNAVSQNDLN------------QQERIVYKSTLELRENIHEQKNMLRHINE 246
           L + +   E+                     ++E++      E   ++ E++ + R I E
Sbjct: 651 LELQREKVEQQVFGYKRTIDKLQGVETTLSGREEKLQNIVDSEKERHLREEQLLNRQIKE 710

Query: 247 LYDEANLEFANYLKE------ISRDLEQNQRTFADEMSKLTILEKTR 287
           L D+      +   +         +L   +R  +    KL  LE   
Sbjct: 711 LNDDIASRRQSAESQRQELMSAKEELRVAKREESSLKEKLQGLEDEI 757



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 22/181 (12%), Positives = 56/181 (30%), Gaps = 18/181 (9%)

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISS-VYRSLKMKLTRMRSIYLNRLDLENKSS 186
           +K+    ++ L D   +     +      +     + L+     + S      +L+ +  
Sbjct: 286 KKSLRRAQQDLADCQLEMQQLQANANRKHVDEDTLKELEQVREELESKENELHELQEELD 345

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI---------------VYKSTLELR 231
            L+   S   + L       +     +N+L   +R                V +   EL+
Sbjct: 346 TLKETKSEQAQQLRDEIQDLQYELRQKNELIDNQRDEIGNLKGNQHNEKNSVSELEAELQ 405

Query: 232 ENIHEQKNMLRHINELYDEANLEFA--NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               + + +   + +   +A    A  +   E       + +   DEM+  +   K   +
Sbjct: 406 RAKQQLEELQNSLEQAKSDARQAKAACDEAVEAKAQAVDDLKELQDEMADKSFYTKGLSR 465

Query: 290 K 290
           +
Sbjct: 466 Q 466


>gi|222082464|ref|YP_002541829.1| protein secretion protein [Agrobacterium radiobacter K84]
 gi|221727143|gb|ACM30232.1| protein secretion protein [Agrobacterium radiobacter K84]
          Length = 441

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 41/133 (30%), Gaps = 3/133 (2%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + +R   ++ LE  +    ++  +                 +K+I+  +           
Sbjct: 144 KAQRQESEADLENAQLTLTRQQTIFRSQAGSKADLDTATASVKKITAQIAALDAQIIAAE 203

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ--PLMKIVPHSKLTYIRAKVT 335
             +           I +P+ GT++             +Q  P + I+       +R +++
Sbjct: 204 VAVETARANLSYTRITAPMDGTVLAI-VNQQGQTVNAAQSAPTIVILGELDTMIVRTEIS 262

Query: 336 PKQIQHVKKGYTA 348
              +  VK G   
Sbjct: 263 EADVVKVKVGQPV 275



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 55/148 (37%), Gaps = 8/148 (5%)

Query: 35  SILLPI-----EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED 89
           +I  P+     E +V +SG       +V + +  SG I    V+ G ++ + T +   + 
Sbjct: 68  AITAPVIRGNVEEAVLASGTFKPI-KLVAVGAQVSGRITALNVKLGDKVQKDTLIAQIDS 126

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              ++ +   + S+ N++     ++S  D  N +  +  +    R +          +  
Sbjct: 127 TTQSNDLKTAQASLANVKAQ--RQESEADLENAQLTLTRQQTIFRSQAGSKADLDTATAS 184

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            K     I+++   +      + +   N
Sbjct: 185 VKKITAQIAALDAQIIAAEVAVETARAN 212


>gi|154492750|ref|ZP_02032376.1| hypothetical protein PARMER_02389 [Parabacteroides merdae ATCC
           43184]
 gi|154087055|gb|EDN86100.1| hypothetical protein PARMER_02389 [Parabacteroides merdae ATCC
           43184]
          Length = 387

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/110 (11%), Positives = 35/110 (31%), Gaps = 8/110 (7%)

Query: 55  NVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           +V  ++         G ++   V+ G  + +G  L      E  + +   + + K ++  
Sbjct: 56  DVQAVQFVEVKPKVEGFVEDVLVDEGEHVKKGQVLFKLSSAELYEEVKEAQANYKQVQAE 115

Query: 110 I---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +   + E   +  L  K  +     E    +      +     S++    
Sbjct: 116 LKMAEVEADRVKRLVEKDIISPIRLEQALAEADVARLRVQQAKSRLLRAE 165


>gi|148684605|gb|EDL16552.1| nuclear mitotic apparatus protein 1, isoform CRA_a [Mus musculus]
          Length = 2062

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/205 (9%), Positives = 66/205 (32%), Gaps = 2/205 (0%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           ++ +    ++  +         +  E+S  +    +   L    +S    L     +   
Sbjct: 426 DNTQLQTRVETLECERGKQEAQLLAERSRFEDEKQQLASLIADLQSSVSNLSQAKEEL-E 484

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL-LSSHQKDLTMMKNLF 206
             S+     +++   S+      ++        L+ ++   +A  L + Q+   + + L 
Sbjct: 485 QASQAQGAQLTAQLTSMTGLNATLQQRDQELASLKEQAKKEQAQMLQTMQEQEQVAQGLR 544

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           ++     + L  +E+ + ++  E      +    L  + E  + +  E     +++    
Sbjct: 545 QQVEQLSSSLKLKEQQLEEAAKEQEATRQDHAQQLAIVAEAREASLRERDTARQQLETVE 604

Query: 267 EQNQRTFADEMSKLTILEKTREQKT 291
           ++          +L      R+   
Sbjct: 605 KEKDAKLESLQQQLQAANDARDNAQ 629



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 3/191 (1%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV---FNYGI 157
           + +  L+       +    L  + + LE     +E QLL    ++     ++        
Sbjct: 411 LQLDTLKQEAAKLATDNTQLQTRVETLECERGKQEAQLLAERSRFEDEKQQLASLIADLQ 470

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           SSV    + K    ++       L  + + +  L ++ Q+    + +L E+    Q  + 
Sbjct: 471 SSVSNLSQAKEELEQASQAQGAQLTAQLTSMTGLNATLQQRDQELASLKEQAKKEQAQML 530

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q  +   +    LR+ + +  + L+   +  +EA  E     ++ ++ L          +
Sbjct: 531 QTMQEQEQVAQGLRQQVEQLSSSLKLKEQQLEEAAKEQEATRQDHAQQLAIVAEAREASL 590

Query: 278 SKLTILEKTRE 288
            +     +  E
Sbjct: 591 RERDTARQQLE 601



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 76/209 (36%), Gaps = 17/209 (8%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              L  + +    +LR   DT +  L+ +  + D   ++ + + +   D      ++ ++
Sbjct: 576 AQQLAIVAEAREASLRER-DTARQQLETVEKEKDAKLESLQQQLQAANDARDNAQTSVTQ 634

Query: 152 VFN------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                      I  ++  ++      R +     +LE +       L + Q+  T  + +
Sbjct: 635 AQQEKAELSQKIGELHACIEASHQEQRQVQARVTELEAQ-------LKAEQQKTTEREKV 687

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR- 264
            ++ A  Q  L   E  +  +   L E      + L+       E   E  + +++  R 
Sbjct: 688 VQEKAQLQEQLRALEESLKITKGSLEEEKRRAADALKEQQCRATEMEAESRSLMEQRERE 747

Query: 265 --DLEQNQRTFADEMSKLTILEKTREQKT 291
             +LEQ +       +++  LE+  + +T
Sbjct: 748 QKELEQEKAGRKGLEARIQQLEEAHQAET 776



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 83/234 (35%), Gaps = 18/234 (7%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC--HIDTEKSALDFLNNKYDVLE-- 128
              G    Q + L          +  +++  ++  +    +   +  +   N +   L+  
Sbjct: 850  SEGQPGQQQSQLAQLHASLAKAIQQVQEKEVRAQKLVDDLSALQEKMAATNKEVACLKTL 909

Query: 129  --KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
              KA E +E   L+ L +     ++  +       R        ++++      +  +  
Sbjct: 910  VLKAGEQQETASLELLKEPPRAANRASDRLGEQQGRPFSSTHAAVKAMEREAEQMGGELE 969

Query: 187  LLRALL--------SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             LRA L            +    +  L ++   +Q DL Q++    +  + L+  ++EQ+
Sbjct: 970  RLRAALIKSQGQQQEERGQQEREVARLTQERGQAQADLAQEKAAKAELEMRLQNTLNEQR 1029

Query: 239  NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                 + E    A  E     +E    L + +   A + ++L  L++T EQ  I
Sbjct: 1030 VEFAALQEALAHALTEKEGTDQE----LAKLRGQEAAQRTELKELQQTLEQLKI 1079



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 58/215 (26%), Gaps = 10/215 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
            E    +  ++         +  +    + L    + L+    S EE+            
Sbjct: 668 TELEAQLKAEQQKTTEREKVVQEKAQLQEQLRALEESLKITKGSLEEEKRRAADALKEQQ 727

Query: 150 SKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLF 206
            +         S+    + +   +      R  LE +   L     +  + L   +    
Sbjct: 728 CRATEMEAESRSLMEQREREQKELEQEKAGRKGLEARIQQLEEAHQAETEALRHELAEAT 787

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY-----DEANLEFANYLKE 261
                ++++  +  R V            E+        E       ++   E      E
Sbjct: 788 ASQHRAESECERLIREVESRQKRFEARQQEEARYGAMFQEQLMALKGEKTGQEVQEEAVE 847

Query: 262 ISRDLE--QNQRTFADEMSKLTILEKTREQKTILS 294
           I  + +  Q Q   A   + L    +  ++K + +
Sbjct: 848 IHSEGQPGQQQSQLAQLHASLAKAIQQVQEKEVRA 882



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 70/214 (32%), Gaps = 7/214 (3%)

Query: 67   IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
            +K+  V    +  +    L    +ET             LR  + + +  ++      + 
Sbjct: 1247 LKRLVVAESEKSQKLEERLRLLQVETASNSARAAERSSALREEVQSLREEVEKQRVVSEN 1306

Query: 127  LEKAFESREEQLLDFLGKYHSTCSKVFN--YGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              +   S+ E+  +   +  +   K F     +S++          +  +   +   +  
Sbjct: 1307 SRQELASQAERAEELGQELKAWQEKFFQKEQALSALQLEHTSTQALVSELLPAKHLCQQL 1366

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             +   A     +++L   K         Q +L + +R +      LR+ I EQ+   + +
Sbjct: 1367 QAEQAAAEKRFREELEQSKQ-AAGGL--QAELMRAQREL-GELGSLRQKIVEQERAAQQL 1422

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
                  +  E  + LK+    L +  R   +  +
Sbjct: 1423 RAEKA-SYAEQLSMLKKAHGLLAEENRGLGERAN 1455



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 69/206 (33%), Gaps = 10/206 (4%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             G+++        F++        ++++ +             L   +    V ++  ++
Sbjct: 1509 EGAKVKVLEERQRFQEERQKLTAQVEQLEVFQREQTKQVMPGKLTEHDQASKVQQQKLKA 1568

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             + Q  +   +            ++ +   L  K        L     +      +    
Sbjct: 1569 FQAQRGESQQEVQR-----LQTQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQ 1623

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              Q+ L  ++ L ++N   +++  +  R + ++ L+ +    E +   RH+         
Sbjct: 1624 KLQEQLQDLEELQKENKELRSEAERLGRELQQAGLKTK----EAEQTCRHLTAQVRSLEA 1679

Query: 254  EFANYLKEISRDLEQNQRTFADEMSK 279
            + A+  +++ RDL + Q       S+
Sbjct: 1680 QVAHADQQL-RDLGKFQVATDALKSQ 1704



 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 7/191 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSAL-DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
               +V +   R     E +A+          + +  +S   +L     KY     KV   
Sbjct: 1459 QFLEVELDQAREKYVQELAAVRTDAETHLAEMRQEAQSTSRELEVMTAKYEGAKVKVLEE 1518

Query: 156  GIS-SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                   R           ++      +     L     + +     +K    +   SQ 
Sbjct: 1519 RQRFQEERQKLTAQVEQLEVFQREQTKQVMPGKLTEHDQASKVQQQKLKAFQAQRGESQQ 1578

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EANLEFANYLKEISRDLEQNQRT 272
            ++ + +  + +   +L +     ++    + +     +A  +    L+E  +DLE+ Q+ 
Sbjct: 1579 EVQRLQTQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQKLQEQLQDLEELQKE 1638

Query: 273  ---FADEMSKL 280
                  E  +L
Sbjct: 1639 NKELRSEAERL 1649


>gi|114657465|ref|XP_001173714.1| PREDICTED: similar to tropomyosin 1, alpha isoform a isoform 20
           [Pan troglodytes]
          Length = 287

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 67/220 (30%), Gaps = 3/220 (1%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             I +   +L  +     D  +  +   K         +  L  L  K    E   +   
Sbjct: 2   DAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYS 61

Query: 136 EQLLDFLGKYHSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           E L D   K      K       ++S+ R +++    +            K         
Sbjct: 62  EALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAAD 121

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             ++ + ++++  +K+   + ++ + +    K   E  +  +E+      I E   E   
Sbjct: 122 ESERGMKVIESRAQKD-EEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAE 180

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           E A   +   R LE+  R     +  L   E    QK   
Sbjct: 181 ERAELSEGQVRQLEEQLRIMDQTLKALMAAEDKYSQKEDR 220


>gi|115456771|ref|NP_001051986.1| Os03g0862100 [Oryza sativa Japonica Group]
 gi|108712242|gb|ABG00037.1| expressed protein [Oryza sativa Japonica Group]
 gi|113550457|dbj|BAF13900.1| Os03g0862100 [Oryza sativa Japonica Group]
          Length = 918

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 79/202 (39%), Gaps = 15/202 (7%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV---LEKAFESR 134
           + +G   L     ++ D++             I+ EK A D +N   ++   +EK   + 
Sbjct: 588 VTKGQVALALSTGDSADVV-------MEELARIEAEKIAEDAVNAHGELVAQVEKDLNAT 640

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            E+ L    +      K+       + +    ++    ++   R  +E++  +L  L S 
Sbjct: 641 FERELTKEREKIERLEKLAEEARVELDKLRAERVEENNALIRGRASVESEMEVLSKLRSE 700

Query: 195 HQKDLTMMKNLFEKNAVS--QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            ++ L  +  L +K  +S  +N + + +  +      + +  +E +   + ++     A 
Sbjct: 701 VEEQLQSV--LSKKVEISFEKNRIEKLQTEIENDRQAVVQLQYELEVERKALSMARAWAE 758

Query: 253 LEFANYLKEISRDLEQNQRTFA 274
            E A   +E +R LE+ +  + 
Sbjct: 759 DE-AKKAREHARALEEARNQWE 779


>gi|66792856|ref|NP_001019707.1| coiled-coil alpha-helical rod protein 1 [Bos taurus]
 gi|61553660|gb|AAX46438.1| StAR-binding protein [Bos taurus]
          Length = 724

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 79/205 (38%), Gaps = 5/205 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           T  + L+   ++  R  +D E      +  +     +     E Q L  + +      + 
Sbjct: 445 TTDMSLELEQLREERNRLDAELQLSAHIIQQEVGRAREQGEAERQKLSEVAQQLEQELQR 504

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNA 210
               ++S+   L+      +        L  + +  + +   +  +K   +   L E+ +
Sbjct: 505 TQESLASLGLQLEAARQGQQESTAEAASLRKELTQQQEIYGQALQEKVAEVEGRLREQLS 564

Query: 211 VSQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            S+  LN+  R   K+ + LR+       +K   + +  L DEA  E    L +  ++LE
Sbjct: 565 ESERRLNEARREHTKAVVSLRQIQRKATREKERNQELRRLQDEARKEEGQRLTQRLKELE 624

Query: 268 QNQRTFADEMSKLTILEKTREQKTI 292
           +++      + +  +L + ++Q+ +
Sbjct: 625 RDKNLMLATLQQEGLLSRYKQQRLL 649



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/143 (10%), Positives = 43/143 (30%), Gaps = 2/143 (1%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   + S+ +L   ++  +        +   L K    ++E     L +  +   
Sbjct: 497 QLEQELQRTQESLASLGLQLEAARQGQQESTAEAASLRKELTQQQEIYGQALQEKVAEVE 556

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                 +S   R L           ++   ++ K++  +      ++     +   E+  
Sbjct: 557 GRLREQLSESERRLNEARREHTKAVVSLRQIQRKATREKERNQELRRLQDEARK--EEGQ 614

Query: 211 VSQNDLNQQERIVYKSTLELREN 233
                L + ER        L++ 
Sbjct: 615 RLTQRLKELERDKNLMLATLQQE 637



 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 25/208 (12%), Positives = 69/208 (33%), Gaps = 8/208 (3%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           ++     D+ +    N R  +   +  +     + +   +  E    Q L    +  S  
Sbjct: 38  VQRPTHQDVLERRPDNQRPQVTMWEQEVSGKGQEPEWRGRCTELAGSQALSQQAELISRQ 97

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ------KDLTMMK 203
            +        V    +  L +   +  + ++LE  +   +A  +  +          +++
Sbjct: 98  LRELRRLEEEVRVLRETSLQQKLRLEAHAVELEALARAEKAGRAEAEGLRAALAGAEVVR 157

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
              E+   SQ +L + +R+  +    L +   E  + L       +++           +
Sbjct: 158 KNLEEG--SQRELEEVQRLHQEQLSSLTQAHQEALSSLTSKAGGLEKSLNNLETRRSGET 215

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKT 291
           ++L   QR       +L+  ++  E + 
Sbjct: 216 KELAAAQREAELLRKQLSKTQEDLEAQV 243


>gi|53711849|ref|YP_097841.1| membrane fusion efflux protein [Bacteroides fragilis YCH46]
 gi|253564098|ref|ZP_04841555.1| membrane fusion efflux protein [Bacteroides sp. 3_2_5]
 gi|52214714|dbj|BAD47307.1| membrane fusion efflux protein [Bacteroides fragilis YCH46]
 gi|251947874|gb|EES88156.1| membrane fusion efflux protein [Bacteroides sp. 3_2_5]
 gi|301161605|emb|CBW21145.1| putative transport/efflux component protein [Bacteroides fragilis
           638R]
          Length = 366

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 96/293 (32%), Gaps = 55/293 (18%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E R+E L+    +     S+V+     ++ +   +   ++          E++  +    
Sbjct: 56  EPRDEVLI--KPQISGIISEVYKEAGQTIKQGEVIAKVKVIPELGQLNSAESRVRVAEIS 113

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            +  + D   +K L+    +S+ D  + E  + K+  EL+      K+ L  I E   + 
Sbjct: 114 TAQAETDHERIKKLYNDKLISREDYEKSEVEIKKAREELQT----AKDALEIIKEGITKN 169

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           +  F++                                  I S I G I+       ++ 
Sbjct: 170 SASFSS--------------------------------TLIRSTIDGLILDVPIKVGNSV 197

Query: 312 A-----QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      +  +   +     + K+   ++  + +G    +      ++    F A 
Sbjct: 198 IMSNTFNDGTTIATVANMND-LIFKGKIDETEVGRIHEGMPVKLTIGALQNLT---FDAE 253

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +E I P   +++   Q         +I     + +++++R+G+ A      + 
Sbjct: 254 LEYISPKGVEENGANQ--------FEIKAAVHAPDSVQIRSGYSANAEIVLQR 298



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 54/139 (38%), Gaps = 6/139 (4%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           +  +E +  ++G++   D V  IK   SGII +   E G  I QG  +   + I     +
Sbjct: 42  IADLEKTTVATGKVEPRDEV-LIKPQISGIISEVYKEAGQTIKQGEVIAKVKVIPELGQL 100

Query: 97  DLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--K 151
           +  +  ++         +T+   +  L N   +  + +E  E ++     +  +     +
Sbjct: 101 NSAESRVRVAEISTAQAETDHERIKKLYNDKLISREDYEKSEVEIKKAREELQTAKDALE 160

Query: 152 VFNYGISSVYRSLKMKLTR 170
           +   GI+    S    L R
Sbjct: 161 IIKEGITKNSASFSSTLIR 179


>gi|121999144|ref|YP_001003931.1| lipopolysaccharide biosynthesis [Halorhodospira halophila SL1]
 gi|121590549|gb|ABM63129.1| lipopolysaccharide biosynthesis [Halorhodospira halophila SL1]
          Length = 518

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 68/189 (35%), Gaps = 10/189 (5%)

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             L+  I+  +    FL  + ++L+   +       +  G    + + +      +V   
Sbjct: 272 DRLQARIEQLEQRRSFLQEQQELLQGLMQDFRGAETEGQGMLTDSPAALGFLLRGNVTAE 331

Query: 164 LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS--------QND 215
           L+  LT +R   +  L LE +   L   L  +Q+ +   +   E+ A          + +
Sbjct: 332 LQQDLTNVREELV--LGLEEQRLGLDEQLQQNQQRIRDAERRLEEKAADLDEFEREFRRE 389

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           +   ER V +   ELR    E +  +        +  L  A +  +  R++ + ++    
Sbjct: 390 VAAAERRVSEKRSELRHFETEHQKQVHSAEREIAQRELRLARFEDDFEREIRRKKQEIRQ 449

Query: 276 EMSKLTILE 284
             ++   L 
Sbjct: 450 YAAQGQELR 458



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 83/240 (34%), Gaps = 7/240 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
            ED    + S    +I++    +  ++        FE    +   DL+++  K      +
Sbjct: 145 PEDRADVVSSIHQNLIQQIIDRHNDRLEVRQ--ARFEARLESMDADLEELRAKRAERRQE 202

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQL---LDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
            E   ++   ++ + LE A   R+EQL   L+       T  +  +     +  + +   
Sbjct: 203 AE-HRVEAHKDRLERLESAGAQRKEQLTHALEEAEAELKTLRENEDRRRRQLEHAREAAE 261

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               ++  NR  L+ +   L    S  Q+   +++ L +    ++ +          +  
Sbjct: 262 EERDALIANRDRLQARIEQLEQRRSFLQEQQELLQGLMQDFRGAETEGQGMLTDSPAALG 321

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            L    +    + + +  + +E  L        +   L+QNQ+   D   +L       +
Sbjct: 322 FLLRG-NVTAELQQDLTNVREELVLGLEEQRLGLDEQLQQNQQRIRDAERRLEEKAADLD 380


>gi|114564412|ref|YP_751926.1| secretion protein HlyD family protein [Shewanella frigidimarina
           NCIMB 400]
 gi|114335705|gb|ABI73087.1| secretion protein HlyD family protein [Shewanella frigidimarina
           NCIMB 400]
          Length = 356

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/303 (11%), Positives = 92/303 (30%), Gaps = 31/303 (10%)

Query: 15  ASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
           A L R+++   + + G   ++     +  +  + + +    V ++    SG I    VEN
Sbjct: 12  ARLVRVSIFLFVSVFGYFMFA-----DAVMPMTPQAMATRMVTKVTPQVSGKIASIAVEN 66

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L + +                     +  E++ L     K D  E      
Sbjct: 67  NQLVAKGDVLFSIDSAPY----------------ELAAEQATLALEQAKQDNAELDASIL 110

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             +      +  +         + ++Y S  +           +L  + +S  + A  + 
Sbjct: 111 AAKADVQANQSSAQQRNSEAKRLDALYASRGVS---------QQLTDQAQSDAVTAEANL 161

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
                 + K +  +    +++L  ++     + +EL  +  + +     +          
Sbjct: 162 LAAKARLTKLVVSRGRNGEDNLKVRQARNRLAQVELNLSYTQIRADQNGVVTNLQLEVGS 221

Query: 255 FANYLKEISRDLEQNQRTFADEMSK-LTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           FA   + +   + +     AD   K L  +E             G + + +  +      
Sbjct: 222 FATVGQPLLAVVSEIVDIIADFREKSLRGIEPQSTALIAFDGQPGRLYHAKVSTVDAGVS 281

Query: 314 QSQ 316
             Q
Sbjct: 282 AGQ 284



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 76/228 (33%), Gaps = 13/228 (5%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             I+     L  K   + SI     +L  + + L    +           L  K  V  N
Sbjct: 60  ASIAVENNQLVAKGDVLFSIDSAPYELAAEQATLALEQAKQDNAELDASILAAKADVQAN 119

Query: 215 DLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYDEANLEFANYLKEI----SRDLE 267
             + Q+R      L+       + +Q       + +  EANL  A               
Sbjct: 120 QSSAQQRNSEAKRLDALYASRGVSQQLTDQAQSDAVTAEANLLAAKARLTKLVVSRGRNG 179

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           ++        ++L  +E       I +   G +   Q     ++A   QPL+ +V  S++
Sbjct: 180 EDNLKVRQARNRLAQVELNLSYTQIRADQNGVVTNLQL-EVGSFATVGQPLLAVV--SEI 236

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
             I A    K ++ ++   TA +    +     + + A +  +D  +S
Sbjct: 237 VDIIADFREKSLRGIEPQSTALI---AFDGQPGRLYHAKVSTVDAGVS 281


>gi|330982107|gb|EGH80210.1| secretion protein HlyD [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 385

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 99/295 (33%), Gaps = 22/295 (7%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +  + L    +     + V   G+    + + +       +   +++L +K   ++    
Sbjct: 31  KPPEYLTAKVERTEIENSVLASGVLQGIKQVDVGAQVSGQLKSLKVNLGDK---VKQGQW 87

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             + D  +++N   ++ V++ +L  Q+        + +      K +    ++   + + 
Sbjct: 88  LAEIDPVVLQNTLRQSQVNEQNLIAQKDAAVAQLKDAKAIYQRYKQL--RADDAISQKDF 145

Query: 254 EFANYLKEIS-RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
           + A    E+   +L   +    D   ++           I++PI+G +V           
Sbjct: 146 DTAQSDFEVRSANLRSLEAQVRDARIQIETARINLGYTRIVAPISGDVVGI-VTQEGQTV 204

Query: 313 QQSQ--PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD---IREKKFKAII 367
             SQ  P++  +       ++A+V+   + H+  G    V F    D       K K   
Sbjct: 205 IASQLTPVILKLADLDTMTVKAQVSEADVIHITPGQ--EVYFTILGDAEKRYYAKLKGTE 262

Query: 368 EKIDPIISQQDNNLQTQE---YYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                 +  Q +N        +Y  +  +      + +  LR    A+V    + 
Sbjct: 263 PAPQNFLDSQSSNASKPNSAVFYNALFDVP-----NPDHRLRISMTAQVHIVREK 312



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 75/193 (38%), Gaps = 14/193 (7%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             IE SV +SG +     V ++ +  SG +K  +V  G ++ QG  L   + +   + + 
Sbjct: 43  TEIENSVLASGVLQGIKQV-DVGAQVSGQLKSLKVNLGDKVKQGQWLAEIDPVVLQNTLR 101

Query: 98  LKKVSIKNLRCHIDTEKSAL----------DFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             +V+ +NL    D   + L            L     + +K F++ +           S
Sbjct: 102 QSQVNEQNLIAQKDAAVAQLKDAKAIYQRYKQLRADDAISQKDFDTAQSDFEVRSANLRS 161

Query: 148 TCSKVFNYGISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             ++V +  I      + +  TR+    S  +  +  +   +++ + L+     L  +  
Sbjct: 162 LEAQVRDARIQIETARINLGYTRIVAPISGDVVGIVTQEGQTVIASQLTPVILKLADLDT 221

Query: 205 LFEKNAVSQNDLN 217
           +  K  VS+ D+ 
Sbjct: 222 MTVKAQVSEADVI 234


>gi|330888977|gb|EGH21638.1| HlyD family secretion protein [Pseudomonas syringae pv. mori str.
           301020]
 gi|330986572|gb|EGH84675.1| HlyD family secretion protein [Pseudomonas syringae pv. lachrymans
           str. M301315]
          Length = 294

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 68/216 (31%), Gaps = 19/216 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q+      R    +  E +E   + +   R         NL     L+E      +  
Sbjct: 78  IDQDRFRLALRQAQATVAERQETWEQARRENRR---NRGLGNLVAREQLEESQSREARAL 134

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +    +   +   ++  I SP+ G  + +++     +    +P++ +V  +   +I
Sbjct: 135 SALGESKVAVDAAQLNLDRSVIRSPVDGY-LNDRAPRDHEFVTAGRPVLSVV-DAASFHI 192

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQDN 379
                  ++  +  G    +R             +I+  I+           P ++   +
Sbjct: 193 DGYFEETKLDGIHVGQGVDIRVIGDNARLTGHVVSIVAGIEDRDRSSGSNLLPNVNPAFS 252

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            ++  +   V +   D+     +  +  G  A V  
Sbjct: 253 WVRLAQRIPVRIAFDDV---PADFRMIAGRTATVSI 285



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++V+I    SG+I+K +V +   + +G  L T +       +   + ++   +   +  +
Sbjct: 46  DIVQIAPDVSGLIQKVEVTDNQPVHKGQVLFTIDQDRFRLALRQAQATVAERQETWEQAR 105

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                     +++ +      EQL +   +     S +    ++     L +  + +RS
Sbjct: 106 RENRRNRGLGNLVAR------EQLEESQSREARALSALGESKVAVDAAQLNLDRSVIRS 158


>gi|322835178|ref|YP_004215204.1| efflux transporter, RND family, MFP subunit [Rahnella sp. Y9602]
 gi|321170379|gb|ADW76077.1| efflux transporter, RND family, MFP subunit [Rahnella sp. Y9602]
          Length = 407

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 4/114 (3%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +    +V  ++   SG I K   + G ++ +G  L T +D       +  +  +   R
Sbjct: 70  GRVEAVQSVQ-LRPRVSGYIDKVNYQEGQEVKKGQVLFTIDDRTYRAAQEQAQAELVRAR 128

Query: 108 CH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
                  +E +  + L     V ++A E R            +  +++    ++
Sbjct: 129 NQASLARSESARTEALIGSLAVSKEAAEQRRSAASQAQSDVLAAQAQLDMAQLN 182


>gi|294911815|ref|XP_002778072.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239886193|gb|EER09867.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 1395

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 89/213 (41%), Gaps = 6/213 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRC-HIDTE-KSALDFLNNKYDVLEKAFESREEQLLDFLG 143
              E+   + + +L K      R   ++TE +  L  L   Y++ + + ++R + L + L 
Sbjct: 1099 RLENERDSLVEELGKERAARERAGRMETEAQRQLGELKLDYEMSQTSLQARVQSLAESLR 1158

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMR-SIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                 C+++  YG+   Y++++ ++ R+R  +   R      ++ L  L +        +
Sbjct: 1159 ASEEKCAELEGYGMR--YKAVEDEVKRLRKELEEAREVSSASAASLHKLAAEMSSQAETL 1216

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
                 +  +++ D +  ER +    +E      + +     ++ +        A   ++ 
Sbjct: 1217 AQAQSERDLARRDRDAIERQMKHLEMECERKDRDLEAAEAKLSVVKARKRELAAANERDS 1276

Query: 263  SRDLEQNQRTFADEMSKLTI-LEKTREQKTILS 294
            +  + + QR    E+++LT   E+   Q ++++
Sbjct: 1277 ATTVAEAQRRVDAEIARLTEKQEREVSQISVIA 1309



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 66/216 (30%), Gaps = 18/216 (8%)

Query: 93   TDLIDLKKVSIKNLRC----HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG--KYH 146
               +D+  V+I  +       +   + +  F     +V+      R+  + D        
Sbjct: 1034 ESSVDVSSVNIDAVLASSNQAVTAARPSSTFRGYSEEVVRAELSLRDAAIQDLQRGLSLK 1093

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM-MKNL 205
            +T  K       S+   L  +            + + +   L+      Q  L   +++L
Sbjct: 1094 ATEVKRLENERDSLVEELGKERAARERAGRMETEAQRQLGELKLDYEMSQTSLQARVQSL 1153

Query: 206  FEKNAVSQ----------NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             E    S+                E  V +   EL E           +++L  E + + 
Sbjct: 1154 AESLRASEEKCAELEGYGMRYKAVEDEVKRLRKELEEAREVSSASAASLHKLAAEMSSQ- 1212

Query: 256  ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            A  L +   + +  +R       ++  LE   E+K 
Sbjct: 1213 AETLAQAQSERDLARRDRDAIERQMKHLEMECERKD 1248



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 69/209 (33%), Gaps = 13/209 (6%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             ++ +    L  E  E  ++      S+  L   + ++   L    ++ D+  +  ++ E
Sbjct: 1179 DEVKR----LRKELEEAREVSSASAASLHKLAAEMSSQAETLAQAQSERDLARRDRDAIE 1234

Query: 136  EQL--LDFLGKYHSTCSKVFNYGISSVY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             Q+  L+   +      +     +S V  R  ++     R       + + +     A L
Sbjct: 1235 RQMKHLEMECERKDRDLEAAEAKLSVVKARKRELAAANERDSATTVAEAQRRVDAEIARL 1294

Query: 193  SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL---RENIHEQKNMLRHINELYD 249
            +  Q+      ++    AV Q  +    R +     +L        +       +    D
Sbjct: 1295 TEKQEREVSQISVI---AVKQRLVELHSREIEGLRAQLGMAESARLQASRRAEELEATCD 1351

Query: 250  EANLEFANYLKEISRDLEQNQRTFADEMS 278
            E  +  A     + R+L + Q     ++S
Sbjct: 1352 ELKVAHARSTAALQRELVEAQGMLQLQVS 1380


>gi|163846402|ref|YP_001634446.1| secretion protein HlyD family protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222524169|ref|YP_002568640.1| secretion protein HlyD family protein [Chloroflexus sp. Y-400-fl]
 gi|163667691|gb|ABY34057.1| secretion protein HlyD family protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222448048|gb|ACM52314.1| secretion protein HlyD family protein [Chloroflexus sp. Y-400-fl]
          Length = 499

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/214 (11%), Positives = 57/214 (26%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SGI+    V+ G  +  G  L+  +D      +   + ++   +       +        
Sbjct: 65  SGIVTAILVDEGDTVTAGQALIQLDDRLQRAAVQQAEANLARAQARYALLLAGASAEARA 124

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
                      +   +          +       +   R+  +       I   +   + 
Sbjct: 125 AAEAALQVAVAQATQVALAVVPADEQAIAAQLAEAQAARTRLLAGADPDLIAQAQAVRDQ 184

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
            ++ L A  S+        +   E+ A    D       +Y    ELR+ + E +     
Sbjct: 185 AAANLAAQQSALAAAKVNAQLAVEQAANVLRDRQADYSRIYWENEELRQKLGEDELPQAR 244

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           I+             +      +   Q   A++ 
Sbjct: 245 IDAEAAALRAVQNAEVALAQARVAAEQAVQAEKE 278


>gi|242311173|ref|ZP_04810190.1| multidrug resistance protein [Burkholderia pseudomallei 1106b]
 gi|242312418|ref|ZP_04811435.1| multidrug resistance protein [Burkholderia pseudomallei 1106b]
 gi|242312586|ref|ZP_04811603.1| multidrug resistance protein [Burkholderia pseudomallei 1106b]
 gi|254299802|ref|ZP_04967250.1| multidrug resistance secretion protein [Burkholderia pseudomallei
           406e]
 gi|157809755|gb|EDO86925.1| multidrug resistance secretion protein [Burkholderia pseudomallei
           406e]
 gi|242134412|gb|EES20815.1| multidrug resistance protein [Burkholderia pseudomallei 1106b]
 gi|242135657|gb|EES22060.1| multidrug resistance protein [Burkholderia pseudomallei 1106b]
 gi|242135825|gb|EES22228.1| multidrug resistance protein [Burkholderia pseudomallei 1106b]
          Length = 461

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 4/152 (2%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R      +   E +   K+ L +       A  +        S    +         ++ 
Sbjct: 217 RAGASVEVVAPEELARAKSSLANAQAALAGAQAQREAARALGSERPVEQNPAVQQAAAQF 276

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +  +  ++ TI+SP+ GT+   +S           PLM +V   +  ++ A     Q++
Sbjct: 277 KLAYRNLKRTTIVSPVDGTV-GQRSVQIGQQVGPGGPLMSVV-QLRQVWVEANFKEGQLR 334

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           H++ G    +    Y       +   +E    
Sbjct: 335 HMRVGQPVRLESDLYGARVT--YHGRVEGFSA 364



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 68/214 (31%), Gaps = 15/214 (7%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
               +L+I+ +   + W I+           +     NVV+I +   G +    V +  Q
Sbjct: 97  WFFGVLAIVALGAALYWFIVGRFSEETD---DAYVAGNVVQIAAQIQGTVTDVLVADTQQ 153

Query: 78  ILQGTPLLTFEDIETTDLIDLKKV-------SIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +  G  L+  +D E        +         + N R  + T +  +        + ++A
Sbjct: 154 VKAGQALVRLDDAEAAAAFAQAQAQLAQAVRQVANTRLSMQTYEQTVKAREADLKLAQQA 213

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           + +R    ++ +        ++     S       +   + +      L  E       A
Sbjct: 214 YRARAGASVEVVA-----PEELARAKSSLANAQAALAGAQAQREAARALGSERPVEQNPA 268

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           +  +  +     +NL     VS  D    +R V 
Sbjct: 269 VQQAAAQFKLAYRNLKRTTIVSPVDGTVGQRSVQ 302


>gi|60680077|ref|YP_210221.1| putative transport/efflux component protein [Bacteroides fragilis
           NCTC 9343]
 gi|60491511|emb|CAH06263.1| putative transport/efflux component protein [Bacteroides fragilis
           NCTC 9343]
          Length = 366

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 96/293 (32%), Gaps = 55/293 (18%)

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
           E R+E L+    +     S+V+     ++ +   +   ++          E++  +    
Sbjct: 56  EPRDEVLI--KPQISGIISEVYKEAGQTIKQGEVIAKVKVIPELGQLNSAESRVRVAEIS 113

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            +  + D   +K L+    +S+ D  + E  + K+  EL+      K+ L  I E   + 
Sbjct: 114 TAQAETDHERIKKLYNDKLISREDYEKSEVEIKKAREELQT----AKDALEIIKEGITKN 169

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY 311
           +  F++                                  I S I G I+       ++ 
Sbjct: 170 SASFSS--------------------------------TLIRSTIDGLILDVPIKVGNSV 197

Query: 312 A-----QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
                      +  +   +     + K+   ++  + +G    +      ++    F A 
Sbjct: 198 IMSNTFNDGTTIATVANMND-LIFKGKIDETEVGRIHEGMPVKLTIGALQNLT---FDAE 253

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           +E I P   +++   Q         +I     + +++++R+G+ A      + 
Sbjct: 254 LEYISPKGVEENGANQ--------FEIKAAVHAPDSVQIRSGYSANAEIVLQR 298



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 54/139 (38%), Gaps = 6/139 (4%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
           +  +E +  ++G++   D V  IK   SGII +   E G  I QG  +   + I     +
Sbjct: 42  IADLEKTTVATGKVEPRDEV-LIKPQISGIISEVYKEAGQTIKQGEVIAKVKVIPELGQL 100

Query: 97  DLKKVSIKNLR---CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--K 151
           +  +  ++         +T+   +  L N   +  + +E  E ++     +  +     +
Sbjct: 101 NSAESRVRVAEISTAQAETDHERIKKLYNDKLISREDYEKSEVEIKKAREELQTAKDALE 160

Query: 152 VFNYGISSVYRSLKMKLTR 170
           +   GI+    S    L R
Sbjct: 161 IIKEGITKNSASFSSTLIR 179


>gi|42558930|sp|Q91Z80|LIPA4_RAT RecName: Full=Liprin-alpha-4; AltName: Full=Protein tyrosine
           phosphatase receptor type f polypeptide-interacting
           protein alpha-4; Short=PTPRF-interacting protein alpha-4
 gi|16555338|gb|AAL23695.1| liprin alpha 4 [Rattus norvegicus]
          Length = 1043

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 80/247 (32%), Gaps = 21/247 (8%)

Query: 53  EDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDI----ETTDLIDLKKVSIKNLR 107
                ++ +   G  I+    E    +  G   L  +D     E   L++ +   +   R
Sbjct: 45  AGAHQQVSALQQGAGIRDGVAEEEETVDLGPKRLWKDDTGRVEELQGLLEKQNYELSQAR 104

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLK 165
             + T  + +  L        +     EE             ++       I+++ +   
Sbjct: 105 ERLVTLSATVTELEEDLGTARRDLIKSEELSGKHQRDLREALAQKEDMEERITTLEKRYL 164

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER---I 222
                  SI+     LEN+ +   +L    ++    ++ L E   V++  L Q  R    
Sbjct: 165 AAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLE---VAEQKLQQTMRKAET 221

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           + +   EL + I              +E +     +L+++   LE+  +  A    +  +
Sbjct: 222 LPEVEAELSQRIAALTKA--------EERHGNIEEHLRQLEGQLEEKNQELARVRQREKM 273

Query: 283 LEKTREQ 289
            E   ++
Sbjct: 274 NEDHNKR 280


>gi|11276954|pir||A59234 slow myosin heavy chain 3 - quail
 gi|1289512|gb|AAC59911.1| slow myosin heavy chain 3 [Coturnix coturnix]
 gi|1289514|gb|AAC59912.1| slow myosin heavy chain 3 [Coturnix coturnix]
          Length = 1931

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 75/214 (35%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   L+  +D   S ++ L      LEK   S E+Q+ +   K 
Sbjct: 1201 QLDNMQRVKQKLEKEKS--ELKLELDDVSSNMEQLIKAKANLEKMCRSTEDQMNEHRNKL 1258

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              +   V              S + R L+ K   +  +   +L    +   L+  L    
Sbjct: 1259 EESQRTVTDLSTQRAKLQTENSELSRQLEEKEAFINQLMRGKLTYTQQLEDLKRQLEEEA 1318

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1319 KAKNALAHALQSAQHDCDLLREQYEEEMEAKAELQRALSKANSEVAQWRTKYETDAIQRT 1378

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L+E  + L Q  +   + +  +     + E+ 
Sbjct: 1379 EELEEAKKKLAQRLQEAEEAVEAVNAKCSSLEKT 1412



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 71/184 (38%), Gaps = 5/184 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                    + +   L+  I+   + ++  N     L+K   + ++ L ++  K+  + ++
Sbjct: 1402 VNAKCSSLEKTKHRLQNEIEDLMADVERSNAAAAALDKKQRNFDKILSEWKQKFEESQTE 1461

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +      +  RSL  +L ++++ Y   L+        +    + Q++++ +      +  
Sbjct: 1462 LEASQKEA--RSLSTELFKLKNAYEESLE---HLETFKRENKNLQEEISDLTEQLGASQK 1516

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            S ++L +  + +    LEL+  + E +  L H       A LEF     E  R L +   
Sbjct: 1517 SIHELEKVRKQLDAEKLELQAALEEAEASLEHEEGKILRAQLEFNQVKAEYERKLAEKDE 1576

Query: 272  TFAD 275
                
Sbjct: 1577 EMEQ 1580



 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 65/217 (29%), Gaps = 17/217 (7%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  +  + +  K   +  L   I+ E++    L  K   L+   
Sbjct: 1051 EGDLKLAQESVMDLENDKQQLEERLKKKDFELNTLNARIEDEQAIAAQLQKKLKELQARI 1110

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE+L            +     +         +L         +L+L  K       
Sbjct: 1111 EELEEELEAERTGR--AKVEKLRSELLQELEETSERLEEAGGATSVQLELNKKREAEFQK 1168

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            L    ++ T+                   +    S  EL E +   + + + + +   E 
Sbjct: 1169 LRRDLEEATLQHEATA---------AALRKKHADSVAELSEQLDNMQRVKQKLEKEKSEL 1219

Query: 252  NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             LE    L ++S ++EQ  +  A+        E    
Sbjct: 1220 KLE----LDDVSSNMEQLIKAKANLEKMCRSTEDQMN 1252



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 19/206 (9%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
              E  + I   + + +  +  I       + L  + D      E  ++ +   +      
Sbjct: 1733 QTEVEEAIQECRNAEEKAKKAITDAAMMAEELKKEQDT-SAHLERMKKNMEQTVKDLQLR 1791

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              +     +    + L+    R+R +     +LE +       +   +K    +K L  +
Sbjct: 1792 LDEAEQLALKGGKKQLQKLEARVRELEN---ELEAEQKHNAESIKGLRKSERRVKELSYQ 1848

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                + ++ + + +V K  L++       K   R   E  ++AN   A + K        
Sbjct: 1849 TEEDRKNMVRLQDLVDKLQLKV-------KAYKRQAEEAEEQANSNLAKFRK-------- 1893

Query: 269  NQRTFADEMSKLTILEKTREQKTILS 294
             Q    +   +  I E    +    S
Sbjct: 1894 AQHELDEAEERADIAESQVNKLRARS 1919


>gi|300311156|ref|YP_003775248.1| type I antifreeze protein:HlyD family secretion protein
           [Herbaspirillum seropedicae SmR1]
 gi|300073941|gb|ADJ63340.1| type I antifreeze protein:HlyD family secretion protein
           [Herbaspirillum seropedicae SmR1]
          Length = 360

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 47/141 (33%), Gaps = 2/141 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G +    V  G  +  G PL   + +      D      +     + + ++ +    + 
Sbjct: 60  GGRVDAILVNEGDFVSAGQPLARMQVLSLQAQRDEALAHQQQSLSAVASAEAQVAVRQSD 119

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
           Y         RE +L     +     S+V     +S  + +     R+RS+       + 
Sbjct: 120 YQAALAQTVQRESELDA--ARRRLARSEVLVREGASSVQEVDDDRARVRSMEAAVTASKA 177

Query: 184 KSSLLRALLSSHQKDLTMMKN 204
           + +   A + + +  ++  ++
Sbjct: 178 QVTAAEAAVVAARTQVSGARS 198



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/288 (9%), Positives = 82/288 (28%), Gaps = 5/288 (1%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R + +L   G + S    +    + S+       L   +         E + ++ ++   
Sbjct: 62  RVDAILVNEGDFVSAGQPLARMQVLSLQAQRDEALAHQQQSLSAVASAEAQVAVRQSDYQ 121

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           +        ++  +             R    S  E+ ++    ++M   +     +   
Sbjct: 122 AALAQTVQRESELDAARRRLARSEVLVREGASSVQEVDDDRARVRSMEAAVTASKAQVTA 181

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A  +      +   + T     + +  ++   +  T+ +P AG + Y +         
Sbjct: 182 AEAAVVA-ARTQVSGARSTVTAAQATVQRIKVDIDDSTLAAPRAGRVQY-RIAQPGEVLG 239

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               ++ +V  S   Y+   +    +  +  G  A +              + +      
Sbjct: 240 GGGKVLNLVDLSD-VYMTFFLPEVVVGKLALGSEARIILDAAPQYVIPARISFVASTAQF 298

Query: 374 ISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +  +  + + +  + V  +I       +   ++ G P         
Sbjct: 299 TPKTVETASERQKLMFRVKAQIDPALLQQHLTLVKTGLPGVAWVRTDQ 346


>gi|293446429|ref|ZP_06662851.1| multidrug efflux transporter MdtA [Escherichia coli B088]
 gi|291323259|gb|EFE62687.1| multidrug efflux transporter MdtA [Escherichia coli B088]
          Length = 445

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 94  AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 151

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 152 QFKVALAQAQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 207

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 208 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 240



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 152 QFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 211

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 212 DEASVASAQLQLD 224


>gi|281351410|gb|EFB26994.1| hypothetical protein PANDA_010114 [Ailuropoda melanoleuca]
          Length = 1933

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 80/229 (34%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ ++     LEK   S E+QL +  GK 
Sbjct: 1207 QIDNLQRVKQKLEKEKS--EFKLEIDDLSSNVESVSKSKANLEKICRSLEDQLSEARGKN 1264

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                + R L+ K + +  +  ++     +   L+  L    
Sbjct: 1265 EEVQRSMSELATQKSRLQTEAGELSRQLEEKESIVSQLSRSKQAFTQQIEELKRQLEEES 1324

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  + +    + L +Q     +S  EL+  + +  + +      Y+   ++  
Sbjct: 1325 KAKNALAHALQSSRHDCDLLREQYEEEQESKAELQRALSKANSEVAQWRTKYETDAIQRT 1384

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1385 EELEEAKKKLAQRLQDSEEQVEAVNAKCASLEKTKQR--LQGEVEDLMV 1431



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 81/216 (37%), Gaps = 10/216 (4%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
               L  +D         +++++   R ++   ++ ++ L    +  E+A +  E++LLD 
Sbjct: 1653 DTQLHLDDALRGQEDLKEQLAMVERRANL--LQAEVEELRASLEQTERARKLAEQELLDA 1710

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                 +   ++ +   +S+  + K   T +  +     D    +            D  M
Sbjct: 1711 -----NERVQLLHTQNTSLIHTKKKLETDLTQLQSEVEDASRDARNAEEKAKKAITDAAM 1765

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            M    +K   +   L + ++ + ++  +L+  + E + +         +   +    ++E
Sbjct: 1766 MAEELKKEQDTSAHLERMKKNMEQTVKDLQHRLDEAEQLALK---GGKKQIQKLETRIRE 1822

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +  +LE  Q+   + +  L   E+  ++ T  S   
Sbjct: 1823 LEFELEGEQKKNTESVKGLRKYERRVKELTYQSEED 1858



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 16/212 (7%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             + L + SI +L          L   + +Y  L+   E  +   L F  K     +++  
Sbjct: 1059 DLKLAQESILDLENDKQQLDERLKKKDFEYSQLQSKVEDEQTLGLQFQKKIKELQARIEE 1118

Query: 155  YGISSVYRSL-KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT---------MMKN 204
                       + K  + RS Y   L+  ++       ++S Q +L          M ++
Sbjct: 1119 LEEEIEAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFQKMRRD 1178

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS- 263
            L E     +  L    +    S  EL E I   + + + + +   E  LE  +    +  
Sbjct: 1179 LEEATLQHEAMLATLRKKHADSMAELGEQIDNLQRVKQKLEKEKSEFKLEIDDLSSNVES 1238

Query: 264  -----RDLEQNQRTFADEMSKLTILEKTREQK 290
                  +LE+  R+  D++S+     +  ++ 
Sbjct: 1239 VSKSKANLEKICRSLEDQLSEARGKNEEVQRS 1270



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 69/203 (33%), Gaps = 14/203 (6%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            L  +  +    ++      +N         T+ + +     K        E  ++ +   
Sbjct: 1731 LETDLTQLQSEVEDASRDARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQT 1790

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            +        +     +    + ++   TR+R +     +LE +       +   +K    
Sbjct: 1791 VKDLQHRLDEAEQLALKGGKKQIQKLETRIRELEF---ELEGEQKKNTESVKGLRKYERR 1847

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +K L  ++   + ++ + + +V K  +++       K+  R   E  ++AN     + K 
Sbjct: 1848 VKELTYQSEEDRKNVLRLQDLVDKLQVKV-------KSYKRQAEEADEQANAHLTKFRK- 1899

Query: 262  ISRDLEQNQRTFADEMSKLTILE 284
               +LE+ +       S++  L 
Sbjct: 1900 AQHELEEAEERADIAESQVNKLR 1922


>gi|317151897|ref|YP_004119945.1| RND family efflux transporter MFP subunit [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316942148|gb|ADU61199.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 388

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 79/242 (32%), Gaps = 21/242 (8%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
           LD     + L   L + Q   +M+    +  A ++   ++ E    +      + + EQ+
Sbjct: 94  LDGRASQARLDQSLQARQTASSMIAQARDGLASAKAAFDKAESTYRRM-----QQLGEQR 148

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +     E  + A L+    + +    +   Q    +    +   E   E   IL+   G
Sbjct: 149 VVTAEEVEQAESAYLQARAAVGQAEEGVAAAQARSREGDKVIREAEIDLEHTAILARETG 208

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +   +     + A   + L+ ++       + A V    I  V+ G    V      + 
Sbjct: 209 EVAK-RLVEPGDLAFPGKKLL-VLQTGASLRLEAMVREGLIGRVRVGDRVEVIVSALGEG 266

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                +A++++++P+      +      + V  ++ +         L  G    +L    
Sbjct: 267 E--PLEAVVDEMEPLADPVTRS------FLVKARLPEAP------GLYPGMFGRLLVPLG 312

Query: 419 NT 420
             
Sbjct: 313 ER 314



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 55/167 (32%), Gaps = 5/167 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +    +V  +++  +G + +  V  G ++  G  L+  +   +   +D    + + 
Sbjct: 54  AVGTVRARTDV-SVEAQVTGRVLEVLVRPGDKVADGDRLVVLDGRASQARLDQSLQARQT 112

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESRE---EQLLDFLGKYHSTCSKVFNYGISSVYR 162
               I   +  L      +D  E  +   +   EQ +    +     S       +    
Sbjct: 113 ASSMIAQARDGLASAKAAFDKAESTYRRMQQLGEQRVVTAEEVEQAESAYLQARAAVGQA 172

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
              +   + RS   +++  E +   L       ++   + K L E  
Sbjct: 173 EEGVAAAQARSREGDKVIREAEID-LEHTAILARETGEVAKRLVEPG 218


>gi|194674659|ref|XP_001254413.2| PREDICTED: citron [Bos taurus]
          Length = 2030

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 7/188 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ++    DL D  K +++NL    + E      + ++   +  A +S+   L   + + 
Sbjct: 730 VLDNQIKKDLAD--KETLENLMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVEL 787

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                   N  + +  R++K +   +  +   +  LE ++  L A     ++ L   + +
Sbjct: 788 SEANKLAANSSLFT-QRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQL---EKI 843

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             ++   +N L + E  + + +LE  E   E K  L  +     E   +    L+     
Sbjct: 844 SHQDHSDKNRLLELETRLREVSLEHEEQKLELKRQLTELQLSLQERESQLT-ALQAARAA 902

Query: 266 LEQNQRTF 273
           LE   R  
Sbjct: 903 LESQLRQA 910



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 3/207 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESREEQLLDFL 142
              +     D +  K+   +  R  +  EKS  +    +   +   EK   +R +Q +   
Sbjct: 1029 VMDLEALNDELLEKERQWEAWRSVLGDEKSQFECRVRELQRMLDTEKQSRARADQRITES 1088

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +      K     I ++ ++LK +  +  S+     DLE K ++L     S Q+ L   
Sbjct: 1089 RQVVELAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQKLETE 1148

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            + L ++    Q  L QQ  +       L + + E  +    +     +   +  N     
Sbjct: 1149 RELKQRLLEEQAKLQQQMDLQKNHIFRLTQGLQEALDRADLLKTERSDLEYQLENIQVLY 1208

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQ 289
            S +  + + T + +   +  L+   +Q
Sbjct: 1209 SHEKVKMEGTISQQTKLIDFLQAKMDQ 1235



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 28/247 (11%), Positives = 72/247 (29%), Gaps = 40/247 (16%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-----------LDFLNNKYDVLEKAFES 133
            L     E    +   + +   L   +   K+            +  L    D +++ F++
Sbjct: 882  LQLSLQERESQLTALQAARAALESQLRQAKTELEETTAEAEEEIQALTAHRDEIQRKFDA 941

Query: 134  REE------QLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                      L + L +     +++ N    +S            +  +      L  + 
Sbjct: 942  LRNSCTVITDLEEQLNQLTEDNAELNNQNFYLSKQLDEASGANDEIVQLRSEVDHLRREI 1001

Query: 186  SLLRALLSSHQKDLTMMKN---LFEKNAVSQN----DLNQQERIVYK------------- 225
            +     L+S ++ +  +K    + E+  +       +L ++ER                 
Sbjct: 1002 TEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDELLEKERQWEAWRSVLGDEKSQFE 1061

Query: 226  -STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                EL+  +  +K      ++   E+       +KE   ++   Q+   ++  K   L 
Sbjct: 1062 CRVRELQRMLDTEKQSRARADQRITESRQVVELAVKEHKAEILALQQALKEQKLKAESLS 1121

Query: 285  KTREQKT 291
                   
Sbjct: 1122 DKLNDLE 1128


>gi|193212584|ref|YP_001998537.1| RND family efflux transporter MFP subunit [Chlorobaculum parvum
           NCIB 8327]
 gi|193086061|gb|ACF11337.1| efflux transporter, RND family, MFP subunit [Chlorobaculum parvum
           NCIB 8327]
          Length = 359

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 55/175 (31%), Gaps = 10/175 (5%)

Query: 208 KNAVSQNDLNQQERIVYKSTL-----ELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
              V + ++   ER+     L     E+  +   +  + R +     E            
Sbjct: 80  SGIVRKVNVEVGERLKAGQPLFNVDDEVAASALRKARVNRELAYRDFERYERLHKEGAVS 139

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
               E  +  FAD  + L    +  E   I +P AG +         +  Q    +  +V
Sbjct: 140 ESSFEAMRLKFADAEADLVAARRRLEDTAIKAPFAGVVTSKLV-EVGDLVQPGAKVANMV 198

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQ 377
                  IR+ +  KQ+  V +G    +          K F+A +  +    S+ 
Sbjct: 199 -DLSKLKIRSSIPEKQVSLVTEGMPVQI---TTDVWPGKVFEARVLSVSAKSSRD 249



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 43/100 (43%), Gaps = 4/100 (4%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SGI++K  VE G ++  G PL   +D      +  +K  +     + D E+   + L+ 
Sbjct: 79  TSGIVRKVNVEVGERLKAGQPLFNVDDEVAASAL--RKARVNRELAYRDFER--YERLHK 134

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           +  V E +FE+   +  D      +   ++ +  I + + 
Sbjct: 135 EGAVSESSFEAMRLKFADAEADLVAARRRLEDTAIKAPFA 174


>gi|123421285|ref|XP_001305956.1| viral A-type inclusion protein [Trichomonas vaginalis G3]
 gi|121887504|gb|EAX93026.1| viral A-type inclusion protein, putative [Trichomonas vaginalis G3]
          Length = 2271

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 79/217 (36%), Gaps = 12/217 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            ++    + +      +   +   +   +AL+  N    VLE+A     ++L +   +  S
Sbjct: 1934 DNKAKLEDLKDLNAKLAAEKAEKNKVVAALEQANAANKVLEEANNELNKELAELQSRSDS 1993

Query: 148  -------TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                     ++     +  +   ++      R I  +  DL++K     + ++  ++ L 
Sbjct: 1994 GLPLAQKQEAEKLRNRVKELQDKVRGLEAEKRQINDDVSDLQSKLDSANSEIADLKQKLA 2053

Query: 201  MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
              ++   +      DL Q+     +   +++     +   +  + E       +  + +K
Sbjct: 2054 AAQSALGEQQKKAEDLLQKLNKAEQENQQIQAQNSNESKNISDLAEKLKNLQKKLNDEMK 2113

Query: 261  E---ISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E   +   L   ++  +D  SKL   ++T E K + +
Sbjct: 2114 EKEALKSKLSAAEKEVSDLKSKLQ--QQTEENKDLKA 2148



 Score = 45.0 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 76/235 (32%), Gaps = 24/235 (10%)

Query: 78   ILQGTP----------LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  G            LL           D     +      +++ K+ L+ +    +  
Sbjct: 1169 VKAGDVIGNLRKQISELLAKNKDLEAKNKDNNGDELAAKEAELESLKNQLEQIKKDLEEK 1228

Query: 128  EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            E+  +   + L     +      +  N   S + + L+    + + +     DL+++ S 
Sbjct: 1229 EEELKQVNDNLSAKDKELQKLSRE--NEKNSKLQKDLEDANNQNKKLDDENNDLQSQLST 1286

Query: 188  LRALLSSHQKDLTMMKNLFEKNAVSQNDL-----------NQQERIVYKSTLELRENIHE 236
                L   QK+   ++NL +K      DL            +    V  + LEL +    
Sbjct: 1287 KDIELQKAQKEAGRLQNLVQKLEEQNKDLYNKLDEETAEKLKSNGEVRNAQLELAKTKAN 1346

Query: 237  QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +++ +  NE   E N E  +++ E+     + Q+   +       +     Q  
Sbjct: 1347 AEDLSKE-NEHLQEQNNEKDSFINELRAKANEAQKKAGENEKLQNQINDLNSQID 1400



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 73/201 (36%), Gaps = 2/201 (0%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +     D +   ++N    +  + +A D L  + D L+   +   + + D   + +    
Sbjct: 724 QQVQEKDARNKELQNKINDLQKKANAADNLQQQVDQLKSMLDDANKSINDKDSQINEKQK 783

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           ++      +   +L+     ++       + +N  +         +++L  +K       
Sbjct: 784 ELIETRKKA--SALEPTKQSLKDTQAELTEKQNDLNNANNKNRELERELKELKKQIGDLN 841

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              NDL +Q     K+   + +   +   +   I EL  +  ++ ++ L+E   +L++ +
Sbjct: 842 RENNDLKEQLDDKVKNDDIIEKLRKQIDELNAKIQELQSQKPVDNSSALEEKINELQKAK 901

Query: 271 RTFADEMSKLTILEKTREQKT 291
           +   +  +KL         K 
Sbjct: 902 QELEETENKLKDTTDELMAKD 922



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 74/203 (36%), Gaps = 6/203 (2%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV- 152
            + +   K     L+ + +   +  D LN K     K       Q+ D      S  +++ 
Sbjct: 968  NELQKAKQDNTRLQSNNEQLTANSDDLNKKLTDATKDNIKLNGQVKDLERLLQSKEAELD 1027

Query: 153  -FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
              N  +  +   +  K  +++ +     DL+ + S    L +      + + +  + N  
Sbjct: 1028 QQNQSVEQLKSQVTDKDDKLKELQSKLNDLQKELSEKERLENLANSLQSKLDDEIKSNNE 1087

Query: 212  SQNDLNQQERI---VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
              N LN+ E+    V K   +L+    + K     + E   E +   AN  +++ + ++ 
Sbjct: 1088 KLNQLNELEKQMNEVQKKADKLQPTQDKLKYAQDELTEKQKELDASNAN-NRDLQKQIKD 1146

Query: 269  NQRTFADEMSKLTILEKTREQKT 291
             ++   D   +   LE+  +   
Sbjct: 1147 LKKQNDDLDEQKQKLEEQLDNNV 1169



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 71/207 (34%), Gaps = 5/207 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSAL-DFLNNKYDVLEKAFES-REEQLLDFLGKYHSTC 149
                ++      + L+         L D +N   D+ +KA ++ R + L+D L    +  
Sbjct: 1693 AERELNNSINEKEELKASNQQLTDQLNDLMNKNKDLKKKANDADRLQNLVDSLKSQLAEA 1752

Query: 150  SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             K  N  + +     +      R +   + +LE  +      +  +       +   +++
Sbjct: 1753 QKKANTVVQNTQPQPQSNELYDRQLEQLKQELEQLNDKYNEAVQKYHDADNSARQEKQQH 1812

Query: 210  AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEISRDL 266
             +     N   +   ++   L + I E +     +N   +E   +    AN L++  + L
Sbjct: 1813 DLDNIKNNAAIQNKQETIENLEKQIQELEKQQNALNAANEEEQKQHKLDANKLQDALKKL 1872

Query: 267  EQNQRTFADEMSKLTILEKTREQKTIL 293
            +  Q   +D   +L   +    +    
Sbjct: 1873 KDEQEKNSDLEKQLIAKKDELGKANDR 1899



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 73/209 (34%), Gaps = 3/209 (1%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
              L + + ++ +  ++ K   ++  +  ++  ++ L    ++    +K  +     L   
Sbjct: 876  QELQSQKPVDNSSALEEKINELQKAKQELEETENKLKDTTDELMAKDKELQKANRGLEHL 935

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN-KSSLLRALLSSHQKDLT 200
                      +    I+    S        +   L +   +N +       L+++  DL 
Sbjct: 936  DQLTRDLEVALAENKIADAENSELKTQLANKDNELQKAKQDNTRLQSNNEQLTANSDDLN 995

Query: 201  M-MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              + +  + N      +   ER++     EL +     + +   + +  D+   E  + L
Sbjct: 996  KKLTDATKDNIKLNGQVKDLERLLQSKEAELDQQNQSVEQLKSQVTDKDDKLK-ELQSKL 1054

Query: 260  KEISRDLEQNQRTFADEMSKLTILEKTRE 288
             ++ ++L + +R      S  + L+   +
Sbjct: 1055 NDLQKELSEKERLENLANSLQSKLDDEIK 1083


>gi|305665584|ref|YP_003861871.1| RND family efflux transporter MFP subunit [Maribacter sp. HTCC2170]
 gi|88710340|gb|EAR02572.1| efflux transporter, RND family, MFP subunit [Maribacter sp.
           HTCC2170]
          Length = 389

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 83/260 (31%), Gaps = 10/260 (3%)

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS-LKMKLTRMRSI 174
           +++ +  + D+     +  +        +  +         + S  +  L   LT     
Sbjct: 24  SIEDIIAQGDLEAIRAKKNDISEQQKTLEIQANQLDSIISILDSNEKLPLVTTLTAKTEN 83

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
           +++ L+L+      + +L   +   T+ +   ++       +++ + +       +   +
Sbjct: 84  FVHYLELQGAVKTKQNVLVYPEMPGTLQRVYVKEG----QRVSKGQILAKIDDGGVGSQL 139

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + K     + +   E                 Q +  F    + +  ++    + TI +
Sbjct: 140 EQLK-TQAELAKTTFERQKRLWEQKIGSEIQYLQAKTNFVAAENTVKQVQSQLGKSTIRA 198

Query: 295 PIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           P +G I  +                + +IV +    YI   V    +  + KG  A V F
Sbjct: 199 PFSGII-DDVIKDQGTVVSPGPGSEVFRIV-NLSNMYIEVDVPETYLGQITKGKEAVVYF 256

Query: 353 PHYADIREKKFKAIIEKIDP 372
           P   D    K +     I+P
Sbjct: 257 PVLGDSINTKIRETGNFINP 276



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 23/54 (42%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           G +++  V+ G ++ +G  L   +D      ++  K   +  +   + +K   +
Sbjct: 108 GTLQRVYVKEGQRVSKGQILAKIDDGGVGSQLEQLKTQAELAKTTFERQKRLWE 161


>gi|328780007|ref|XP_001120388.2| PREDICTED: major antigen [Apis mellifera]
          Length = 2026

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 81/204 (39%), Gaps = 3/204 (1%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS--TCS 150
                D ++V I  LR  +D EK+A + L +     +   +  + Q+ +         T +
Sbjct: 1380 RGEGDGQRVEIDRLRTTLDAEKTAAEKLKSDLQSCKDENDKLQTQINEMKRSLDKMGTEN 1439

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  +    + L+    +++S+     +L  +   L   L   ++DL  ++N  EK  
Sbjct: 1440 DRLKREVDESRKKLEDMEAKVKSLENQLSNLSAEKEELVKELYRTREDLNNLRNELEKQT 1499

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              ++ + ++   + +    L+E +++ ++    +    D+ N E A   K++   L+   
Sbjct: 1500 GVKDTMEKESTNLKEELKALKEELNKTRDENDRLKNENDKLNAEIARLNKQLDA-LKDES 1558

Query: 271  RTFADEMSKLTILEKTREQKTILS 294
                +++  L        ++  ++
Sbjct: 1559 ANLKNDIENLNERNAELSKELAVA 1582



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 75/207 (36%), Gaps = 8/207 (3%)

Query: 82  TPLLTFEDIETTDL-IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
             L T    E   L ++  K  +++L   +   + + + +  + +++    + R +Q++ 
Sbjct: 312 DLLNTLRQSEINLLGLEGLKSKLEHLEPELYELRESKEEIMEELNMMRDTLKERNDQIIQ 371

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
            L                S   +L+ KL    S+     DL N+    RA     +    
Sbjct: 372 ILEDKAK-----LEEYYKSKVETLEAKLDEQASLSAELEDLRNELEDQRAKNKELEACCK 426

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            M  L +K +  +   ++ E+ +  +  EL     E  ++   I    + A  +    L 
Sbjct: 427 DMDALEKKLSELEKKRSELEKELEDNRGELERLQKENLDLKDVIE--VERAEKDKLRDLL 484

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTR 287
           E S+ L+++      ++ +L       
Sbjct: 485 EESKKLKEDNENLWAQLERLRGENDDL 511



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 76/200 (38%), Gaps = 8/200 (4%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL---DFLGKYHSTCSKV 152
            ++  K  + N +   D EK   D   N+  + +KA ES   +L    D L K  +  +  
Sbjct: 1196 VEHCKFELDNEKLKADLEKVLKDL--NECQIAKKAIESDLIKLKNEKDDLNKNMTDLTSQ 1253

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
             +    S+      K      I     +LE     L  L + + K  + + +L ++ A +
Sbjct: 1254 LDRQKRSLEAEKSAKDRGDVQIASLNSELEALKKELEKLRADNSKYKSEIDDLGKQLASA 1313

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            +N+LN     +            E  + LR + + Y     E      E +  L Q++R+
Sbjct: 1314 KNELNDCREEIVVLKNANSALRSEL-DPLRSLKDDYSRLTTELDGLKSE-NTKLLQDKRS 1371

Query: 273  FADEMSKLTILEKTREQKTI 292
              DE  KL   E   ++  I
Sbjct: 1372 LEDEFGKLRG-EGDGQRVEI 1390



 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 66/182 (36%), Gaps = 5/182 (2%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           +  +S  D L  +   L++A    E+++ D          +            L  KL  
Sbjct: 198 EDLRSENDRLKGEMTDLKRALAQCEQKMKDIEEPREVKVVETVTVPEYIDIEDLMNKLNN 257

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL 230
                 N      + +     L    + + ++K+L E+ A+ + DL +++  +      L
Sbjct: 258 CEQTVANLTKELEEKNNKIDALKKELEQMAILKSLEEQIAIMKQDLKKKDEKISDLLNTL 317

Query: 231 RE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSK-LTILEKT 286
           R+   N+   + +   +  L  E   E     +EI  +L   + T  +   + + ILE  
Sbjct: 318 RQSEINLLGLEGLKSKLEHLEPELY-ELRESKEEIMEELNMMRDTLKERNDQIIQILEDK 376

Query: 287 RE 288
            +
Sbjct: 377 AK 378


>gi|306838638|ref|ZP_07471474.1| Acriflavin resistance protein A precursor [Brucella sp. NF 2653]
 gi|306406281|gb|EFM62524.1| Acriflavin resistance protein A precursor [Brucella sp. NF 2653]
          Length = 390

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 76  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 128

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + SI      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 129 QASIDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 188

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 189 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 245

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 246 IGMGVTVALLADPSIEAEGNIRELS 270



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 115 RIDDVEQRANMRVAQASIDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 174

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 175 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 233

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 234 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 281


>gi|301771624|ref|XP_002921227.1| PREDICTED: myosin-3-like isoform 2 [Ailuropoda melanoleuca]
          Length = 1920

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 80/229 (34%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ ++     LEK   S E+QL +  GK 
Sbjct: 1204 QIDNLQRVKQKLEKEKS--EFKLEIDDLSSNVESVSKSKANLEKICRSLEDQLSEARGKN 1261

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                + R L+ K + +  +  ++     +   L+  L    
Sbjct: 1262 EEVQRSMSELATQKSRLQTEAGELSRQLEEKESIVSQLSRSKQAFTQQIEELKRQLEEES 1321

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  + +    + L +Q     +S  EL+  + +  + +      Y+   ++  
Sbjct: 1322 KAKNALAHALQSSRHDCDLLREQYEEEQESKAELQRALSKANSEVAQWRTKYETDAIQRT 1381

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1382 EELEEAKKKLAQRLQDSEEQVEAVNAKCASLEKTKQR--LQGEVEDLMV 1428



 Score = 43.5 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 74/246 (30%), Gaps = 37/246 (15%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
               L  +D         +++++   R ++   ++ ++ L    +  E+A +  E++LLD 
Sbjct: 1650 DTQLHLDDALRGQEDLKEQLAMVERRANL--LQAEVEELRASLEQTERARKLAEQELLDA 1707

Query: 142  LGKYH---------------------STCSKVFNYGISSVYRSLKMKLT---------RM 171
              +                          S+V +    +     K K            +
Sbjct: 1708 NERVQLLHTQNTSLIHTKKKLETDLTQLQSEVEDASRDARNAEEKAKKAITDAAMMAEEL 1767

Query: 172  RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE-----RIVYKS 226
            +        LE     +   +   Q  L   + L  K    Q    +       R   + 
Sbjct: 1768 KKEQDTSAHLERMKKNMEQTVKDLQHRLDEAEQLALKGGKKQIQKLETRSVKGLRKYERR 1827

Query: 227  TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
              EL     E +  +  + +L D+  ++  +Y ++     EQ              LE+ 
Sbjct: 1828 VKELTYQSEEDRKNVLRLQDLVDKLQVKVKSYKRQAEEADEQANAHLTKFRKAQHELEEA 1887

Query: 287  REQKTI 292
             E+  I
Sbjct: 1888 EERADI 1893



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 16/212 (7%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             + L + SI +L          L   + +Y  L+   E  +   L F  K     +++  
Sbjct: 1056 DLKLAQESILDLENDKQQLDERLKKKDFEYSQLQSKVEDEQTLGLQFQKKIKELQARIEE 1115

Query: 155  YGISSVYRSL-KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT---------MMKN 204
                       + K  + RS Y   L+  ++       ++S Q +L          M ++
Sbjct: 1116 LEEEIEAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFQKMRRD 1175

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS- 263
            L E     +  L    +    S  EL E I   + + + + +   E  LE  +    +  
Sbjct: 1176 LEEATLQHEAMLATLRKKHADSMAELGEQIDNLQRVKQKLEKEKSEFKLEIDDLSSNVES 1235

Query: 264  -----RDLEQNQRTFADEMSKLTILEKTREQK 290
                  +LE+  R+  D++S+     +  ++ 
Sbjct: 1236 VSKSKANLEKICRSLEDQLSEARGKNEEVQRS 1267


>gi|281306779|ref|NP_536334.1| liprin-alpha-4 [Rattus norvegicus]
          Length = 1185

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 80/247 (32%), Gaps = 21/247 (8%)

Query: 53  EDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDI----ETTDLIDLKKVSIKNLR 107
                ++ +   G  I+    E    +  G   L  +D     E   L++ +   +   R
Sbjct: 187 AGAHQQVSALQQGAGIRDGVAEEEETVDLGPKRLWKDDTGRVEELQGLLEKQNYELSQAR 246

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLK 165
             + T  + +  L        +     EE             ++       I+++ +   
Sbjct: 247 ERLVTLSATVTELEEDLGTARRDLIKSEELSGKHQRDLREALAQKEDMEERITTLEKRYL 306

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER---I 222
                  SI+     LEN+ +   +L    ++    ++ L E   V++  L Q  R    
Sbjct: 307 AAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLE---VAEQKLQQTMRKAET 363

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           + +   EL + I              +E +     +L+++   LE+  +  A    +  +
Sbjct: 364 LPEVEAELSQRIAALTKA--------EERHGNIEEHLRQLEGQLEEKNQELARVRQREKM 415

Query: 283 LEKTREQ 289
            E   ++
Sbjct: 416 NEDHNKR 422


>gi|149056034|gb|EDM07465.1| myosin, heavy polypeptide 14 [Rattus norvegicus]
          Length = 1848

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 70/213 (32%), Gaps = 6/213 (2%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
              L+     E  +     K   +  R  ++ E S L    +      +  E +  +L   
Sbjct: 1216 QALVEL--TEQLEQARRGKSVWEKTRLSLEAEVSELKTELSSLQTSRQEGEQKRRRLESQ 1273

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            L +     S        +  +  + ++  + S+     + E+K+  L   LSS +  L  
Sbjct: 1274 LQEVQGRSSDSERARAEAAEKLQRAQV-ELESVSTALSEAESKAIRLSKELSSAESQLHD 1332

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN---Y 258
             + L ++   ++  L  + R +      LRE + E+                + +     
Sbjct: 1333 TQELLQEETRAKLALGSRVRALEAEAAGLREQMEEEVVARERAGRELQTTQAQLSEWRRR 1392

Query: 259  LKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E +  LE  +        +   L +   +KT
Sbjct: 1393 QEEEAAVLEAGEEARRRAAREAETLAQRLAEKT 1425



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 78/222 (35%), Gaps = 16/222 (7%)

Query: 88   EDIETTDLIDLK-KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL------LD 140
            ED+E   +   K +   ++L   ++  +  L+   +  +  ++    RE+++      L+
Sbjct: 1138 EDLEAERVARAKAEKQRRDLGEELEALRGELEDTLDSTNAQQELRSKREQEVTELKKTLE 1197

Query: 141  FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI----YLNRLDLENKSSLLRALLSS-- 194
               + H    +      S     L  +L + R         RL LE + S L+  LSS  
Sbjct: 1198 EEARTHEVAMQELRQRHSQALVELTEQLEQARRGKSVWEKTRLSLEAEVSELKTELSSLQ 1257

Query: 195  --HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
               Q+     + L  +    Q   +  ER   ++  +L+    E +++   ++E   +A 
Sbjct: 1258 TSRQEGEQKRRRLESQLQEVQGRSSDSERARAEAAEKLQRAQVELESVSTALSEAESKA- 1316

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            +  +  L      L   Q    +E      L          +
Sbjct: 1317 IRLSKELSSAESQLHDTQELLQEETRAKLALGSRVRALEAEA 1358



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 30/238 (12%), Positives = 75/238 (31%), Gaps = 30/238 (12%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSAL-DFLNNKYDVLEKAFESREEQLLDFL------- 142
            E       +   ++     ++ E++ L + L  + ++  +A E+R               
Sbjct: 879  ELQQQSAREVGELQGRVAQLEEERARLAEQLRAEAELCSEAEETRARLAARKQELELVVT 938

Query: 143  ------------GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                         +   +  K     I  +   L+ +    + + L ++  E K      
Sbjct: 939  ELEARVGEEEECSRQLQSEKKRLQQHIQELETHLEAEEGARQKLQLEKVTTEAKMKKFEE 998

Query: 191  ---LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR----ENIHEQKNMLRH 243
               LL      L+  + L E+     +    +E    KS  +LR      I + ++ L+ 
Sbjct: 999  DLLLLEDQNSKLSKERRLLEERLAEFSSQAAEEEEKVKSLNKLRVKYEATIADMEDRLKK 1058

Query: 244  INELYDEAN---LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
              +   E             E+   + + ++   + + +L   E+  +   + +   G
Sbjct: 1059 EEKGRQELEKLKRRLDGESSELQEQMMEQKQRAEELLIQLGRKEEELQSALVRAEEEG 1116



 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 59/159 (37%), Gaps = 16/159 (10%)

Query: 128  EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            ++  ++R ++L         +  +V    +      L+ +  R+        +L +++  
Sbjct: 864  DEVLQARAQELQKVQELQQQSAREV--GELQGRVAQLEEERARLAEQLRAEAELCSEAEE 921

Query: 188  LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             RA L++ +++L ++             + + E  V +     R+   E+K + +HI EL
Sbjct: 922  TRARLAARKQELELV-------------VTELEARVGEEEECSRQLQSEKKRLQQHIQEL 968

Query: 248  YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
                  E     +++  +    +         L +LE  
Sbjct: 969  ETHLEAE-EGARQKLQLEKVTTEAKMKKFEEDLLLLEDQ 1006


>gi|34498187|ref|NP_902402.1| hypothetical protein CV_2732 [Chromobacterium violaceum ATCC 12472]
 gi|34104042|gb|AAQ60402.1| probable membrane protein [Chromobacterium violaceum ATCC 12472]
          Length = 412

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/309 (10%), Positives = 102/309 (33%), Gaps = 9/309 (2%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W    ++   +  R    + + +      ++  P++++   +   +     V ++S   G
Sbjct: 28  WHQHSQSAKEAAARNKGAAPMAVGVAAVQAMDAPLQLNALGT---VTSAYTVTVRSRVDG 84

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK---SALDFLNN 122
            ++K     G Q+ QG  L   +       +   +  +   +  ++  +   +    L +
Sbjct: 85  QLEKVHFTEGQQVKQGQLLAELDARSYQAALTQAEGQLLRDQALLENARLDLARYQQLAS 144

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE 182
           +  + ++  ++++  +  + G        V    ++  Y  +   ++    +        
Sbjct: 145 QNSIAKQQVDTQQALVRQYQGTVKVDQGAVAAARVNVDYTRVTAPISGRVGLRQVDPGNI 204

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR 242
             +S    L++  Q     +     +  VS + + Q  R      +E  +  +  K    
Sbjct: 205 VHASDANGLVTITQTQPINVTFAIPE--VSLSPVLQAARDNKTLKVEAWDRDNRHKLADG 262

Query: 243 HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI-LSPIAGTIV 301
            +  L ++ N        + +   EQ Q      ++    L   ++   +  + +    +
Sbjct: 263 KLLALDNQLNTSTGTINIKATFANEQQQLFPNQFVNVNLQLGVRKDAVVVPTAAVQLGKM 322

Query: 302 YNQSFSSSN 310
            N  ++   
Sbjct: 323 GNYVYTVGA 331


>gi|22297672|ref|NP_680919.1| hypothetical protein tll0128 [Thermosynechococcus elongatus BP-1]
 gi|22293849|dbj|BAC07681.1| tll0128 [Thermosynechococcus elongatus BP-1]
          Length = 920

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 69/215 (32%), Gaps = 7/215 (3%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE--SREEQLLDFLGKYHST 148
           +           ++  R   +  +     L  K    E A E  +R +Q  + L      
Sbjct: 205 QYEQQATALAAELERDRQRCEELRQECQALAAKKQEYEAAVETLNRLQQTCERLEAQLRQ 264

Query: 149 CSKVFNYGISSV--YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             ++       +   R  + +  +++S Y      E     L   L         ++ L 
Sbjct: 265 QEELCRDRQRQLTAARESQARCQQLQSDYDRYRQQEACYQELEQQLRERATLEHKIRTLE 324

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK--EISR 264
           E+      +L + E    ++   +   +   +  +   + L  E       Y +  +  +
Sbjct: 325 EQQQKLATELARIESQ-RQAIATIASQLAALEPQIADADALDAEIAPLEVRYQQAQQADQ 383

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
           +L   ++  A   ++L  +++  +      PIA T
Sbjct: 384 ELRHLKQQAATLQTRLEEIDQQVQALEQQRPIAAT 418



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 64/232 (27%), Gaps = 26/232 (11%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D +  + +  +  ++   +   +     L+ L    + LE     +EE   D   +  + 
Sbjct: 220 DRQRCEELRQECQALAAKKQEYEAAVETLNRLQQTCERLEAQLRQQEELCRDRQRQLTAA 279

Query: 149 CSKVFNYGISS----VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                           YR  +     +      R  LE+K   L         +L  +++
Sbjct: 280 RESQARCQQLQSDYDRYRQQEACYQELEQQLRERATLEHKIRTLEEQQQKLATELARIES 339

Query: 205 LFEKNAVSQNDLNQQE--------------------RIVYKSTLELRENIHEQKNMLRHI 244
             +  A   + L   E                    +   ++  ELR    +   +   +
Sbjct: 340 QRQAIATIASQLAALEPQIADADALDAEIAPLEVRYQQAQQADQELRHLKQQAATLQTRL 399

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
            E+  +         + I+  L   Q       ++L            L PI
Sbjct: 400 EEIDQQVQA--LEQQRPIAATLSAKQAQREQLQAQLNHAAAAHALAATLDPI 449



 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 20/196 (10%), Positives = 60/196 (30%), Gaps = 16/196 (8%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
           +   + +   L   +   +  L        + ++  E   E  L    +     ++    
Sbjct: 491 LQQLQQNYHWLLDQLTALRHTLTDPAALPALNQRLEELEAEIALAAAAERSLLRAQALEE 550

Query: 156 ---GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
               + +  R L  +   +  +     DLE +   LR   ++  +               
Sbjct: 551 ERCRLQTELRQLGDRQQALEPLSQELADLEGRVEKLRQERANLGQP-----------HAQ 599

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN--LEFANYLKEISRDLEQNQ 270
           +  L +Q+    +   +      E+ ++   +  LY E +         +++S +L + +
Sbjct: 600 RQLLLEQQAAAPQLEADYERLCSERASLQARLTPLYRERHHYATLEARRQQLSDELARGR 659

Query: 271 RTFADEMSKLTILEKT 286
            ++   +       + 
Sbjct: 660 SSYDTYLQHQQQAAQV 675


>gi|332306325|ref|YP_004434176.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173654|gb|AEE22908.1| efflux transporter, RND family, MFP subunit [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 440

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 89/278 (32%), Gaps = 20/278 (7%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
             G+++   +          I     V+ G  + +G  L + +  E T+ +  ++ S++ 
Sbjct: 82  VQGQVVAAISPRLYSPAQGTI--NLLVDAGDTVQKGQVLASVDSPELTNELQQEESSLQK 139

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
           L+  +D ++     + +K   LE        ++     +     +       S      +
Sbjct: 140 LKMELDRQR-----IQSKKQALENQKAVDLAKVALTAAEREKRRADKAFSTQSISQIDFE 194

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLS---SHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
                + +  L     +  + L +  L+     ++ L   + L   +   +         
Sbjct: 195 KAQDELENAKLVYKHAQQDADLSKESLAFEVQSKQLLVKRQALMVSDLSRKVARLDIRSP 254

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-ISRDLEQNQRTF-----ADE 276
           V      L      Q    + I  + D +  E    + E  + DL  N         +D 
Sbjct: 255 VSGIVGNLAAEQRNQVAKNQAILSVVDLSEFELEVDIPESYADDLAINMPALVTVNGSDH 314

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
           ++KL  +    E       + G + +++   + +  Q 
Sbjct: 315 LAKLVSISPEIENNQ----VTGRVRFSKKDENGSALQP 348


>gi|256043783|ref|ZP_05446705.1| efflux transporter, RND family, MFP subunit [Brucella melitensis
           bv. 1 str. Rev.1]
 gi|260564968|ref|ZP_05835453.1| acriflavin resistance protein A [Brucella melitensis bv. 1 str.
           16M]
 gi|265990209|ref|ZP_06102766.1| efflux transporter [Brucella melitensis bv. 1 str. Rev.1]
 gi|260152611|gb|EEW87704.1| acriflavin resistance protein A [Brucella melitensis bv. 1 str.
           16M]
 gi|263000878|gb|EEZ13568.1| efflux transporter [Brucella melitensis bv. 1 str. Rev.1]
          Length = 372

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 97  RIDDVEQRANMRVAQASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 157 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 216 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 263



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 58  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 110

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + S+      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 111 QASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 170

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 171 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 227

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 228 IGMGVTVALLADPSIEAEGNIRELS 252


>gi|255524532|ref|ZP_05391487.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|296186030|ref|ZP_06854435.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|255511828|gb|EET88113.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
 gi|296049298|gb|EFG88727.1| efflux transporter, RND family, MFP subunit [Clostridium
           carboxidivorans P7]
          Length = 366

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 95/257 (36%), Gaps = 10/257 (3%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           K + ++++S+ ++++ ++   +    +  + Q +      L     VS+  + + +  V 
Sbjct: 34  KAQKSQIKSVSISKV-IKKNIAQSTMVSGTIQPNYRNEITLGNTQKVSKVLVTEGQ-DVK 91

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR-TFADEMSKLTIL 283
           K  + ++ +  + KN L  +      A    +       +    N+  + +   +++  L
Sbjct: 92  KDDVLVQMDSSDYKNELNKVQADLSNAQSAMSKAQVPGGQGKNSNESISTSSIRAQIDSL 151

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVK 343
            +   Q  I S + G +V   +       Q    +  IV  +    +   ++      V 
Sbjct: 152 NEKIAQCDIKSGVDGKVVKVDA-KEGQVPQTGDKI--IVDDNSKYKVSIDMSQYDAMKVS 208

Query: 344 KGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
           KG  A V+      ++       +  +  I   + ++   Q+  +V + +T       + 
Sbjct: 209 KGQKAIVKIKGNDKMKYI---GSVTDVGQIAQTKMDDKNAQQEAKVNVIVTLDGAGTGD- 264

Query: 404 ELRNGFPAEVLFTAKNT 420
            +++G+ A+V       
Sbjct: 265 SIKSGYKADVEVVFNER 281



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 36/113 (31%), Gaps = 16/113 (14%)

Query: 40  IEISVSSSGEILNE-------DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           I  S   SG I           N  +        + K  V  G  + +   L+  +  + 
Sbjct: 53  IAQSTMVSGTIQPNYRNEITLGNTQK--------VSKVLVTEGQDVKKDDVLVQMDSSDY 104

Query: 93  TDLIDLKKVSIKNLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            + ++  +  + N +      +       N+   +   +  ++ + L + + +
Sbjct: 105 KNELNKVQADLSNAQSAMSKAQVPGGQGKNSNESISTSSIRAQIDSLNEKIAQ 157


>gi|251788038|ref|YP_003002759.1| peptidase M50 [Dickeya zeae Ech1591]
 gi|247536659|gb|ACT05280.1| peptidase M50 [Dickeya zeae Ech1591]
          Length = 707

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 77/229 (33%), Gaps = 34/229 (14%)

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
           Q+    +  LEL  +  + +  +        +   +     +E + + +   R  A+ ++
Sbjct: 472 QQVQAGEKLLELTSSDLDYRINIERRQIAVLQQQRQRGAGRQETASETQVLDRQLAESLA 531

Query: 279 KLTILEKTREQKTILSPIAGTIVYN-QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           +   L+  R++ ++ +P AG +    +  +   +     PL+++V       ++  +   
Sbjct: 532 RYRGLDAQRQRLSLTAPQAGQVRDMARDMTEGRWLTTDMPLLRVVEQGAG-KVQGYLPED 590

Query: 338 QIQHVKKGYTATVRFPHY--ADIREKKFKAIIEKID------------------PIISQQ 377
            +   K G T       +   D    +    ++ I                   PI  ++
Sbjct: 591 SLTRAKAGMTG-----AFIADDPAYPRLAVQLKDIAPTGTAWLQQEMLASDRHGPIAVRR 645

Query: 378 DNNLQTQEY---YEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
           D +   Q     Y V   + +  FS     LR      V+   +  ++ 
Sbjct: 646 DRDHNPQPVQAQYRVRFAVQEGQFSPPQQPLR----GSVILEGEKESIL 690



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 14/165 (8%)

Query: 6   WKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSG 65
           W   K  HP SL R  L+    ++ L     L P   S+     +  E NV  + +P   
Sbjct: 408 WSMRKNAHPVSLLRSGLIVAAVLVSL-----LFPWRGSIRIPAVLEAE-NVSALYAPIPA 461

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            +K   V +G Q+  G  LL     +    I++++  I  L+       +      ++  
Sbjct: 462 QVKALYVADGQQVQAGEKLLELTSSDLDYRINIERRQIAVLQQQ-RQRGAGRQETASETQ 520

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           VL++       QL + L +Y    ++     +++        + R
Sbjct: 521 VLDR-------QLAESLARYRGLDAQRQRLSLTAPQAGQVRDMAR 558


>gi|237507519|ref|ZP_04520234.1| multidrug resistance secretion protein [Burkholderia pseudomallei
           MSHR346]
 gi|237510311|ref|ZP_04523026.1| multidrug resistance secretion protein [Burkholderia pseudomallei
           MSHR346]
 gi|234999724|gb|EEP49148.1| multidrug resistance secretion protein [Burkholderia pseudomallei
           MSHR346]
 gi|235002516|gb|EEP51940.1| multidrug resistance secretion protein [Burkholderia pseudomallei
           MSHR346]
          Length = 489

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 4/152 (2%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R      +   E +   K+ L +       A  +        S    +         ++ 
Sbjct: 245 RAGASVEVVAPEELARAKSSLANAQAALAGAQAQREAARALGSERPVEQNPAVQQAAAQF 304

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +  +  ++ TI+SP+ GT+   +S           PLM +V   +  ++ A     Q++
Sbjct: 305 KLAYRNLKRTTIVSPVDGTV-GQRSVQIGQQVGPGVPLMSVV-QLRQVWVEANFKEGQLR 362

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           H++ G    +    Y       +   +E    
Sbjct: 363 HMRVGQPVRLESDLYGARVT--YHGRVEGFSA 392



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 68/214 (31%), Gaps = 15/214 (7%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
               +L+I+ +   + W I+           +     NVV+I +   G +    V +  Q
Sbjct: 125 WFFGVLAIVALGAALYWFIVGRFSEETD---DAYVAGNVVQIAAQIQGTVTDVLVADTQQ 181

Query: 78  ILQGTPLLTFEDIETTDLIDLKKV-------SIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +  G  L+  +D E        +         + N R  + T +  +        + ++A
Sbjct: 182 VKAGQALVRLDDAEAAAAFAQAQAQLAQAVRQVANTRLSMQTYEQTVKAREADLKLAQQA 241

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           + +R    ++ +        ++     S       +   + +      L  E       A
Sbjct: 242 YRARAGASVEVVA-----PEELARAKSSLANAQAALAGAQAQREAARALGSERPVEQNPA 296

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           +  +  +     +NL     VS  D    +R V 
Sbjct: 297 VQQAAAQFKLAYRNLKRTTIVSPVDGTVGQRSVQ 330


>gi|160883408|ref|ZP_02064411.1| hypothetical protein BACOVA_01377 [Bacteroides ovatus ATCC 8483]
 gi|156111128|gb|EDO12873.1| hypothetical protein BACOVA_01377 [Bacteroides ovatus ATCC 8483]
          Length = 344

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 73/251 (29%), Gaps = 11/251 (4%)

Query: 48  GEILNEDNVVEIKSPFS------GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
           G I   DN    +          G IKK   +   Q+ +G  LL  ED E    +   + 
Sbjct: 34  GNIEYTDNAQVKQHITPINTRVPGFIKKIYFDEYQQVRKGDTLLIIEDAEFRLRVAQAEA 93

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI-SSV 160
            + N           +    N   V + + E    Q+ +   + +     +    +    
Sbjct: 94  DLANATAGRQATTIGIATTQNNLSVSDASIEEVRVQMENAKRELNRFEKLLQEDAVTKQQ 153

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           Y ++       ++ Y      +  +SL+++  +           L E    +  +L +  
Sbjct: 154 YDNVHTAYEAAKARYEQVSRAKMSTSLVKSEQTHRLGQNEAGVRLAE----AALELARLN 209

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
                          +++ +   + +          +    +  +  + Q     E +++
Sbjct: 210 LSYTVIIAPCDGTTGKKEILEGQLVQPGQTIVDIVDSSDLWVIANYRETQLPNIKEGAEV 269

Query: 281 TILEKTREQKT 291
            I        T
Sbjct: 270 EITADAVPNVT 280


>gi|319427704|gb|ADV55778.1| efflux transporter, RND family, MFP subunit [Shewanella
           putrefaciens 200]
          Length = 388

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 61/202 (30%), Gaps = 26/202 (12%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++  +   E    K+  +L +           +  + D    E     K+   +L +N 
Sbjct: 108 VTKGQVIA-ELDNTKAKADLDKAKSALALAKTKLERVEDLLIKEPFALAKQDVDELRENV 166

Query: 271 RTF-ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               AD   K  I+        I +P  G  + + S S  +       L+ +        
Sbjct: 167 NLAHADFRQKQAIMNDYL----IKAPFDGQ-LTSFSQSIGSQIGAGTALVTLYSLHP--- 218

Query: 330 IRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
           +  +  ++       KKG    V    Y     + F  ++  + P I +           
Sbjct: 219 VEVRYAISQNDFGKAKKGQEVDVTVEAYG---TQIFNGVVNYVAPAIDESAG-------- 267

Query: 388 EVILKITDLAFSDNNIELRNGF 409
              ++I      +   +L  G 
Sbjct: 268 --RVEI-HATIDNAEFKLAPGM 286



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/110 (10%), Positives = 42/110 (38%), Gaps = 10/110 (9%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I      NG ++ +G  +   ++ +    +D  K ++   +  ++  +  L  +   + +
Sbjct: 97  ISAIHFSNGDKVTKGQVIAELDNTKAKADLDKAKSALALAKTKLERVEDLL--IKEPFAL 154

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKV--------FNYGISSVYRSLKMKL 168
            ++  +   E +      +    + +        F+  ++S  +S+  ++
Sbjct: 155 AKQDVDELRENVNLAHADFRQKQAIMNDYLIKAPFDGQLTSFSQSIGSQI 204


>gi|123443976|ref|YP_001007946.1| p-hydroxybenzoic acid efflux subunit AaeA [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|158512894|sp|A1JRH9|AAEA_YERE8 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|122090937|emb|CAL13819.1| putative HlyD family secretion protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 311

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 56/173 (32%), Gaps = 12/173 (6%)

Query: 204 NLFEKN----AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            L +K      + Q    Q            +    E++        L  +A  +    +
Sbjct: 67  QLVQKGQILFVIDQPRYQQALAEAEADVAYYQTLAAEKQRESGRRQRLGIQAMSQ--EEI 124

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            + +  L+  +   A  ++   + +   E+ T+ +P  G +      +   +  +    +
Sbjct: 125 DQSNNVLQTVRHQLAKAVAVRDLAKLDLERTTVRAPAEGWVTNLNVHA-GEFINRGATAV 183

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            +V      YI A +   +++ VK G+ A +        R       ++ I  
Sbjct: 184 ALV-KKDTFYILAYLEETKLEGVKPGHRAEI--TPLGSNR--ILHGTVDSISA 231



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 46/146 (31%), Gaps = 6/146 (4%)

Query: 16  SLKRMTLLSIIGIIGLI-TWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            +    L+ ++ +I +   W+           + +     +VV I    SG+I    V++
Sbjct: 10  RIGITLLVVLLAVIAIFKVWAFYTE----SPWTRDAKFTADVVAIAPDVSGLITDVPVKD 65

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L   +       +   +  +   +  +  EK        +  +   + E  
Sbjct: 66  NQLVQKGQILFVIDQPRYQQALAEAEADVAYYQT-LAAEKQRESGRRQRLGIQAMSQEEI 124

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSV 160
           ++         H     V    ++ +
Sbjct: 125 DQSNNVLQTVRHQLAKAVAVRDLAKL 150


>gi|154251171|ref|YP_001411995.1| RND family efflux transporter MFP subunit [Parvibaculum
           lavamentivorans DS-1]
 gi|154155121|gb|ABS62338.1| efflux transporter, RND family, MFP subunit [Parvibaculum
           lavamentivorans DS-1]
          Length = 404

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 60/173 (34%), Gaps = 21/173 (12%)

Query: 20  MTLLSIIGIIGLITWS-----ILLPIEISVS--------SSGEILNEDN-----VVEIKS 61
           + L ++ GI G    +        P  ++VS        ++G             VEI+ 
Sbjct: 18  IALAAVAGIAGFGLTAENEESAAAPQAVAVSVATVDEREAAGWDEFSGRLEAVERVEIRP 77

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF-- 119
             +G+++      GS + +G  L T +       +   +  + + R      K  LD   
Sbjct: 78  RVAGVVQDVHFREGSLVRKGDLLFTIDRAPYAAEVQRAEAQLASARSSYAFAKVDLDRAR 137

Query: 120 -LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            L +K  + ++  + R     +     H   + +    ++  Y  ++  ++  
Sbjct: 138 QLVSKGTISKRTLDERVNIFGEAEAALHGAEANLEATRLNLEYTEIRAPISGR 190


>gi|312891793|ref|ZP_07751300.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
 gi|311295735|gb|EFQ72897.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
          Length = 355

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 62/199 (31%), Gaps = 16/199 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V   D  ++ ++V         N +  +     + E   +  L            + + +
Sbjct: 80  VQTGDYVKKGQLVATVDETTYRNQYNAQMAQAKLAEENYKRTLAVFEKGSVAEIKMLEAK 139

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
             +    S      +      + +P +G I   +   +   +   QP+ +++  +    +
Sbjct: 140 ANYEQASSSARATYQNIAHTRLYAPQSGFI-GEKRTEAGAISAPGQPVAQLL-DTHSVDV 197

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V   +I   K G  A V+     +      +  I ++  +      N      Y + 
Sbjct: 198 LVAVPENEINLYKAGNRALVKIDALGNQ---PLEGRISEVGVLALNNSAN------YNIK 248

Query: 391 LKITDLAFSDNNIELRNGF 409
           +K      ++   ELR G 
Sbjct: 249 VK-----LANAGQELRPGM 262



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 49/168 (29%), Gaps = 12/168 (7%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I  F V+ G  + +G  + T ++    +  + +    K    +     +  +  +  
Sbjct: 72  SGTINSFPVQTGDYVKKGQLVATVDETTYRNQYNAQMAQAKLAEENYKRTLAVFEKGSVA 131

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVF---NYGISSVYRSLKMKLTRMRSIYLNRLD 180
              + +A  + E+        Y +           G     R+    ++         LD
Sbjct: 132 EIKMLEAKANYEQASSSARATYQNIAHTRLYAPQSGFIGEKRTEAGAISAPGQPVAQLLD 191

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFE---------KNAVSQNDLNQQ 219
             +   L+    +         + L +         +  +S+  +   
Sbjct: 192 THSVDVLVAVPENEINLYKAGNRALVKIDALGNQPLEGRISEVGVLAL 239


>gi|300121779|emb|CBK22353.2| unnamed protein product [Blastocystis hominis]
          Length = 413

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 6/210 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E    +  K+ S   L    +  +   D  + + +  EK  +  EE+L+    K      
Sbjct: 155 EIQQTLTAKQRSYSELCGRFERFQKQRDQRDKESERKEKMQKESEEELMLLQKKLTIDKL 214

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA---LLSSHQKDLTMMKNLFE 207
            + +   +      + +    +   + R  +E++SS L      + S  + L   K L +
Sbjct: 215 NMIDELKTLQLNQRQSREREEQEKAVLRKRIEDESSGLAECGSEIESIVRQLQERKQLLD 274

Query: 208 KNAVSQNDL---NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
              +SQ +L     QER       E  E +  Q        E  +      A    E+ R
Sbjct: 275 NKRISQTELENQMDQERKAQDRMREEWEQVSLQIQKHSKAIEELNSQKERAAQSQAELER 334

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILS 294
              + ++  +     L+ +  T +Q    +
Sbjct: 335 KALEIEKQLSATKESLSTMALTMKQLEDQA 364



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 78/210 (37%), Gaps = 6/210 (2%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           E      +    +  +  L+  +  +K  +        + ++    REEQ    L K   
Sbjct: 187 ESERKEKMQKESEEELMLLQKKLTIDKLNMIDELKTLQLNQRQSREREEQEKAVLRKRIE 246

Query: 148 TCSKVFNY---GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
             S         I S+ R L+ +   + +  +++ +LEN+    R      +++   +  
Sbjct: 247 DESSGLAECGSEIESIVRQLQERKQLLDNKRISQTELENQMDQERKAQDRMREEWEQVSL 306

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
             +K++ +  +LN Q+    +S  EL     E +  L    E      L     L++ ++
Sbjct: 307 QIQKHSKAIEELNSQKERAAQSQAELERKALEIEKQLSATKESLSTMALTMKQ-LEDQAQ 365

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILS 294
            L+Q       ++ +    E+   Q  ILS
Sbjct: 366 ALQQQYSALEKQVDRCK--EERSLQTAILS 393


>gi|291407064|ref|XP_002719844.1| PREDICTED: citron isoform 2 [Oryctolagus cuniculus]
          Length = 2070

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 7/188 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ++    DL D  K S++NL    + E      + ++   +  A +S+   L   + + 
Sbjct: 770 VLDNQIKKDLAD--KESLENLMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVEL 827

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                   N  + +  R++K +   +  +   +  LE ++  L A     ++ L   + +
Sbjct: 828 SEANKLAANSSLFT-QRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQL---EKI 883

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             ++   +N L + E  + + +LE  E   E K  L  +     E   +    L+     
Sbjct: 884 SHQDHSDKNRLLELETRLREVSLEHEEQKLELKRQLTELQLSLQERESQLT-ALQAARAA 942

Query: 266 LEQNQRTF 273
           LE   R  
Sbjct: 943 LESQLRQA 950



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 3/207 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESREEQLLDFL 142
              +     D +  K+   +  R  +  EKS  +    +   +   EK   +R +Q +   
Sbjct: 1069 VMDLEALNDELLEKERQWEAWRSVLGDEKSQFECRVRELQRMLDTEKQSRARADQRITES 1128

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +      K     I ++ ++LK +  +  S+     DLE K ++L     S Q+ L   
Sbjct: 1129 RQVVELAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQKLETE 1188

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            + L ++    Q  L QQ  +       L + + E  +    +     +   +  N     
Sbjct: 1189 RELKQRLLEEQAKLQQQMDLQKNHIFRLTQGLQEALDRADLLKTERSDLEYQLENIQVLY 1248

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQ 289
            S +  + + T + +   +  L+   +Q
Sbjct: 1249 SHEKVKMEGTISQQTKLIDFLQAKMDQ 1275



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/247 (11%), Positives = 72/247 (29%), Gaps = 40/247 (16%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-----------LDFLNNKYDVLEKAFES 133
            L     E    +   + +   L   +   K+            +  L    D +++ F++
Sbjct: 922  LQLSLQERESQLTALQAARAALESQLRQAKTELEETTAEAEEEIQALTAHRDEIQRKFDA 981

Query: 134  REE------QLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                      L + L +     +++ N    +S            +  +      L  + 
Sbjct: 982  LRNSCTVITDLEEQLNQLTEDNAELNNQNFYLSKQLDEASGANDEIVQLRSEVDHLRREI 1041

Query: 186  SLLRALLSSHQKDLTMMKN---LFEKNAVSQN----DLNQQERIVYK------------- 225
            +     L+S ++ +  +K    + E+  +       +L ++ER                 
Sbjct: 1042 TEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDELLEKERQWEAWRSVLGDEKSQFE 1101

Query: 226  -STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                EL+  +  +K      ++   E+       +KE   ++   Q+   ++  K   L 
Sbjct: 1102 CRVRELQRMLDTEKQSRARADQRITESRQVVELAVKEHKAEILALQQALKEQKLKAESLS 1161

Query: 285  KTREQKT 291
                   
Sbjct: 1162 DKLNDLE 1168


>gi|251791384|ref|YP_003006105.1| p-hydroxybenzoic acid efflux subunit AaeA [Dickeya zeae Ech1591]
 gi|247540005|gb|ACT08626.1| secretion protein HlyD family protein [Dickeya zeae Ech1591]
          Length = 315

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/237 (11%), Positives = 64/237 (27%), Gaps = 12/237 (5%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            + Q    Q            +    E+K        L  +A       +++    L+  
Sbjct: 82  VIDQPRYQQALEQAQADVAYYQALADEKKRESARRQRLGVQAMSR--EEIEQSGNALQTT 139

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               A   ++  + +    +  + +P  G I      +   Y  +    + +V       
Sbjct: 140 LHQLAKAQAEQELAKLDLARTVVRAPADGWITNLHVHA-GEYITRGATAVALVKKDSFYL 198

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN------NLQT 383
           + A +   ++  V+ GY   +       I      +I   +    S  DN      +   
Sbjct: 199 L-AYMEETKLAEVRPGYRVEITPLGSNKILFGSVDSIAAGVTNSSSTADNKGLATVDSNL 257

Query: 384 QEYYEVILKITDLAFSDNNIELRN-GFPAEVLFTAKNTTLAQEIIHPITDNWPKIFE 439
           +           +       +    G  A V       T   + + P+     ++ E
Sbjct: 258 EWVRLAQRVPVKIRLEQQWGDQYPAGTTATV-VVTGEQTRNTKSMSPLLQLLHRLRE 313



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 1/108 (0%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
             +VV I    SG++   +V++   + QG  L   +       ++  +  +   +  +  
Sbjct: 49  SADVVAIAPDVSGLLTDVKVQDNQPVKQGDVLFVIDQPRYQQALEQAQADVAYYQA-LAD 107

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           EK        +  V   + E  E+         H          ++ +
Sbjct: 108 EKKRESARRQRLGVQAMSREEIEQSGNALQTTLHQLAKAQAEQELAKL 155


>gi|222083284|ref|YP_002542687.1| HlyD family secretion protein [Agrobacterium vitis S4]
 gi|221738664|gb|ACM39502.1| HlyD family secretion protein [Agrobacterium vitis S4]
          Length = 356

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 4/173 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E  VS +G I  E + VEI +  +G ++K  V+ G  +  G  L   +  E         
Sbjct: 56  EGLVSGNGRI--ESDQVEISAKSAGRVQKVLVQEGDLVSPGQVLAYIDTTELQASRAKYV 113

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCSKVFNYGIS 158
             +      +   K+ +     +  + E         + +     K         +   +
Sbjct: 114 ADLATQEASMLEAKATVVQRQAELTLKEANLRRALNTIQNGAISQKERDEAQSEHDSAKA 173

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +  S K      RSI   +  ++   + +     +      ++  L     V
Sbjct: 174 ILDASEKSVTASERSIDAAQALIDQIDAQIADAALAAPVKGRVLYRLANPGEV 226



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/256 (11%), Positives = 78/256 (30%), Gaps = 21/256 (8%)

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           N  I S    +  K        L +         + A + + +   +  K + +  A  +
Sbjct: 62  NGRIESDQVEISAKSAGRVQKVLVQEGDLVSPGQVLAYIDTTELQASRAKYVADL-ATQE 120

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLKEISRDLEQNQR 271
             + + +  V +   EL       +  L  I    +  +   E  +        L+ +++
Sbjct: 121 ASMLEAKATVVQRQAELTLKEANLRRALNTIQNGAISQKERDEAQSEHDSAKAILDASEK 180

Query: 272 TFADEMSKLTILEKTREQKTILS-------PIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +       +   +   +Q            P+ G ++Y +  +          ++ I+  
Sbjct: 181 SVTASERSIDAAQALIDQIDAQIADAALAAPVKGRVLY-RLANPGEVVSAGGKVLTII-D 238

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDN 379
               ++   +  +Q   V  G  A ++F            A +  + P         +  
Sbjct: 239 LAEIFMEIYLPLEQAMRVPIGSQARIQFDGADF----AIPAKVSFVSPEAQFTPKQVETR 294

Query: 380 NLQTQEYYEVILKITD 395
           N + +  + + L++  
Sbjct: 295 NERDKLVFRLKLRVPP 310


>gi|197337135|ref|YP_002158413.1| multidrug resistance protein A [Vibrio fischeri MJ11]
 gi|197314387|gb|ACH63836.1| multidrug resistance protein A [Vibrio fischeri MJ11]
          Length = 355

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 89/303 (29%), Gaps = 38/303 (12%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            QL+           + +   +     +L     +  S+  +     +     +   ++ 
Sbjct: 64  NQLVKKGELLFKIDDEKYLLAVQKAKIALAQAKEQEASLVADIEAARSNVKTTQVTSNNA 123

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            ++   +K L    AVS + L+       ++   L     +   +   + +   ++    
Sbjct: 124 NREYHRIKRLANSGAVSASGLDSALTKRDQAAANLMAAKQKVHALEVKLGKGNGQS---- 179

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
                                 + L   E   E   +++   G I   Q      +A  +
Sbjct: 180 ---------------SAVLSAKNSLKQAELDLEHTQVVAQNEGIITNMQLH-VGVFANAN 223

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIIS 375
           QPL+  +P     ++ A    K    + KG  A V    Y  +  + F  I+E  D  ++
Sbjct: 224 QPLLTFIPTDS-LWVSADYREKATSEMVKGMRAEV---AYDAMPGEVFPLIVESRDYGVA 279

Query: 376 QQDNNLQTQ------------EYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
                   Q            +   V + +T        + +  G  A V+      ++ 
Sbjct: 280 SAQQKANGQLSSVEVSNRWVRDAQRVRVNLTSDEPLSPRLFV--GSRATVIIYTSGNSVI 337

Query: 424 QEI 426
             I
Sbjct: 338 DYI 340



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 62/203 (30%), Gaps = 18/203 (8%)

Query: 15  ASLKRMTLLSIIGIIGLITWS-ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVE 73
               R+ ++  + +   +  +  L P+       G ++      +I    SG I +    
Sbjct: 9   KQWMRILIVLFLIVTAYLVMADRLTPLTTQSKVQGFVV------QISPEVSGRIVEVNHT 62

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           N   + +G  L   +D         +K  +   +  I   ++     +   D+       
Sbjct: 63  NNQLVKKGELLFKIDD---------EKYLLAVQKAKIALAQAKEQEASLVADIEAARSNV 113

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           +  Q+            K      +     L   LT+      N +  + K   L   L 
Sbjct: 114 KTTQVTSNNANREYHRIKRLANSGAVSASGLDSALTKRDQAAANLMAAKQKVHALEVKLG 173

Query: 194 SHQKDLTMMKNLFEKNAVSQNDL 216
                 + +  L  KN++ Q +L
Sbjct: 174 KGNGQSSAV--LSAKNSLKQAEL 194


>gi|170695144|ref|ZP_02886292.1| secretion protein HlyD family protein [Burkholderia graminis C4D1M]
 gi|170139996|gb|EDT08176.1| secretion protein HlyD family protein [Burkholderia graminis C4D1M]
          Length = 375

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/174 (11%), Positives = 55/174 (31%), Gaps = 3/174 (1%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            R     +  I+  + W +    +     + +   +  VV + +  SG + +  V N   
Sbjct: 24  GRAVKWVVCLIVVSLIWYLFA--DRFTPYTQQARVQAYVVSVAAEASGRVTRVLVHNNQD 81

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L   +  +    +D  +  +++ R  +    + +D           A E +  Q
Sbjct: 82  VKPGDVLFEVDSGQYRIAVDRARAELESTRRQVGASTAGVDSALASLRA-AVANEVKARQ 140

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             + L + +       +     V R+   +     +     ++   +    +  
Sbjct: 141 DSERLERLYRDDEGTVSLRRLEVARATHEQAQSQVAAARAEVERAREQQGGKGQ 194



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/190 (12%), Positives = 54/190 (28%), Gaps = 2/190 (1%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           ++   R +LE+    + A  +     L  ++        ++ D  + ER+       +  
Sbjct: 99  AVDRARAELESTRRQVGASTAGVDSALASLRAAVANEVKARQDSERLERLYRDDEGTVSL 158

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              E         +    A        +E      Q         + L   E       I
Sbjct: 159 RRLEVARATHEQAQSQVAAARAEVERAREQQGGKGQENAQLRAAAAALEKAELDLANTRI 218

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +   G I   ++     +A    P+M ++      ++ A +T   + H++ G    +  
Sbjct: 219 KARSGGVITDLRT-EVGQFAAAGNPVMTLIAIRD-VWVSADMTENNLGHLRPGTPVRIAL 276

Query: 353 PHYADIREKK 362
                     
Sbjct: 277 DALPGEVFGG 286


>gi|163845033|ref|YP_001622688.1| RND family efflux transporter MFP subunit [Brucella suis ATCC
           23445]
 gi|163675756|gb|ABY39866.1| efflux transporter, RND family, MFP subunit [Brucella suis ATCC
           23445]
          Length = 372

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 54/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 97  RIDDVEQRANMRVAQASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 157 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   + 
Sbjct: 216 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVG 263



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 58  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 110

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + S+      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 111 QASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 170

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 171 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 227

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 228 IGMGVTVALLADPSIEAEGNIRELS 252


>gi|23500643|ref|NP_700083.1| HlyD family secretion protein [Brucella suis 1330]
 gi|161620968|ref|YP_001594854.1| RND family efflux transporter MFP subunit [Brucella canis ATCC
           23365]
 gi|254700117|ref|ZP_05161945.1| RND family efflux transporter MFP subunit [Brucella suis bv. 5 str.
           513]
 gi|254703236|ref|ZP_05165064.1| RND family efflux transporter MFP subunit [Brucella suis bv. 3 str.
           686]
 gi|254710849|ref|ZP_05172660.1| RND family efflux transporter MFP subunit [Brucella pinnipedialis
           B2/94]
 gi|256015677|ref|YP_003105686.1| HlyD family secretion protein [Brucella microti CCM 4915]
 gi|256029232|ref|ZP_05442846.1| RND family efflux transporter MFP subunit [Brucella pinnipedialis
           M292/94/1]
 gi|256157427|ref|ZP_05455345.1| RND family efflux transporter MFP subunit [Brucella ceti M490/95/1]
 gi|256253595|ref|ZP_05459131.1| RND family efflux transporter MFP subunit [Brucella ceti B1/94]
 gi|260567830|ref|ZP_05838299.1| acriflavin resistance protein A [Brucella suis bv. 4 str. 40]
 gi|261220731|ref|ZP_05935012.1| efflux transporter [Brucella ceti B1/94]
 gi|261318423|ref|ZP_05957620.1| efflux transporter [Brucella pinnipedialis B2/94]
 gi|261750608|ref|ZP_05994317.1| efflux transporter [Brucella suis bv. 5 str. 513]
 gi|261753866|ref|ZP_05997575.1| efflux transporter [Brucella suis bv. 3 str. 686]
 gi|265986221|ref|ZP_06098778.1| efflux transporter [Brucella pinnipedialis M292/94/1]
 gi|265995917|ref|ZP_06108474.1| efflux transporter [Brucella ceti M490/95/1]
 gi|23464287|gb|AAN34088.1| HlyD family secretion protein [Brucella suis 1330]
 gi|161337779|gb|ABX64083.1| efflux transporter, RND family, MFP subunit [Brucella canis ATCC
           23365]
 gi|255998337|gb|ACU50024.1| HlyD family secretion protein [Brucella microti CCM 4915]
 gi|260154495|gb|EEW89576.1| acriflavin resistance protein A [Brucella suis bv. 4 str. 40]
 gi|260919315|gb|EEX85968.1| efflux transporter [Brucella ceti B1/94]
 gi|261297646|gb|EEY01143.1| efflux transporter [Brucella pinnipedialis B2/94]
 gi|261740361|gb|EEY28287.1| efflux transporter [Brucella suis bv. 5 str. 513]
 gi|261743619|gb|EEY31545.1| efflux transporter [Brucella suis bv. 3 str. 686]
 gi|262550214|gb|EEZ06375.1| efflux transporter [Brucella ceti M490/95/1]
 gi|264658418|gb|EEZ28679.1| efflux transporter [Brucella pinnipedialis M292/94/1]
          Length = 372

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 97  RIDDVEQRANMRVAQASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 157 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 216 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 263



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 58  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 110

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + S+      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 111 QASMDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 170

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 171 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 227

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 228 IGMGVTVALLADPSIEAEGNIRELS 252


>gi|331653503|ref|ZP_08354504.1| multidrug resistance protein MdtA (Multidrug transportermdtA)
           [Escherichia coli M718]
 gi|331048352|gb|EGI20428.1| multidrug resistance protein MdtA (Multidrug transportermdtA)
           [Escherichia coli M718]
          Length = 464

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 113 AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLIALHFQEGQQVKAGDLLAEIDPS 170

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 226

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 227 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 259



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 230

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 231 DEASVASAQLQLD 243


>gi|323936879|gb|EGB33163.1| efflux transporter [Escherichia coli E1520]
          Length = 455

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 104 AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLIALHFQEGQQVKAGDLLAEIDPS 161

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 162 QFKVALAQAQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 217

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 218 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 250



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 162 QFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 221

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 222 DEASVASAQLQLD 234


>gi|325110770|ref|YP_004271838.1| hypothetical protein Plabr_4243 [Planctomyces brasiliensis DSM
           5305]
 gi|324971038|gb|ADY61816.1| hypothetical protein Plabr_4243 [Planctomyces brasiliensis DSM
           5305]
          Length = 646

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/253 (11%), Positives = 66/253 (26%), Gaps = 18/253 (7%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +G  L  F          + +     L    D   S    ++ +     +   ++ +Q
Sbjct: 104 VNKGDVLARFSPSNFKAEEAILQAKRDKLVAERDKTASQPLEIDEELTRTHQNALAKIDQ 163

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
               L        +    G+      +   +   R I       +   S L   L   Q+
Sbjct: 164 AHSALNNLIPLHKETVRIGLEKRLDRIDKWIAIDRYITDYDATRKQSVSELDVRLKEFQR 223

Query: 198 DLTMMK----------NLFEKNAVSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              + +           L    AVS  + + + ER +     E  +     +   + I  
Sbjct: 224 VSKLARDHGIITDREYELKRHEAVSSAEQVQKLERSIELFKREADQLKANAEKFDQLITT 283

Query: 247 LYDEANLEFANYLKEISRDLEQN--QRTFADEMSKLTILEKTREQKTILS---PIAGTIV 301
                N E   + + +     +           ++    ++  E   I +    +   I 
Sbjct: 284 QATALNAEIKRFEQSLRAAERERDSLEEAIASDNRRAQKQRDAELAMITAELGEVDAGIQ 343

Query: 302 YNQSFSSSNYAQQ 314
                + +     
Sbjct: 344 SL--HTVNTVLAP 354


>gi|309379614|emb|CBX21785.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 1161

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 69/206 (33%), Gaps = 11/206 (5%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +     +  +K+ R H+       + L  + + LEK  E+ E        + +     +
Sbjct: 174 KERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAER-YKSLTAQLNQQQDLL 232

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR----ALLSSHQKDLTMMKNLFEK 208
                     +      + +S+   + +   +   L     AL ++ Q     +  L  K
Sbjct: 233 DYAQWQQSLAAADKATAQHQSLQAQQDETAAQVQALNDEVHALQTAEQSQQQAVHELGNK 292

Query: 209 NAVSQNDLNQQE---RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN---YLKEI 262
             V +  + + E   R        +  +    +  L+ I++   +  ++       ++E 
Sbjct: 293 RGVLREQIARLEEQIRHRQNLHQRIERDKQAAQAQLQRIHQEQQQIRVQLEENELQVEEK 352

Query: 263 SRDLEQNQRTFADEMSKLTILEKTRE 288
             +L +     A+   +L  LE+ + 
Sbjct: 353 QTELAEWAMQVAEHEERLPELEEAQA 378


>gi|308050203|ref|YP_003913769.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
 gi|307632393|gb|ADN76695.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
          Length = 362

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 53/147 (36%), Gaps = 1/147 (0%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           ++ +  SG+++   VE G ++  G  L T +       ++  +  +  +   ++   +  
Sbjct: 75  QVVARVSGLVESLHVEEGQRVEAGQKLATIDPRRYRLALNKAQAELDVIDQELERLNAIA 134

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           +      + L K    R+  L D                I+ V     +K  +M S    
Sbjct: 135 NQQLVSQETLAKLVYRRQAALADRDIAALQLEYSTVASPIAGVVAKRFVKRGKMASEMDA 194

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKN 204
              +  +   L  +L   +++L+ ++ 
Sbjct: 195 LFHIVQQ-DTLHGILHLPERELSKVRP 220



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 80/231 (34%), Gaps = 29/231 (12%)

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQND-LNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
            +S++ +   +++   E   V++   L +   +     +E  + +         +     
Sbjct: 57  SISAYYRTTALLEAPEEAQVVARVSGLVESLHVEEGQRVEAGQKLATIDPRRYRLALNKA 116

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLT-----------ILEKTREQKTILSPIAG 298
           +A L+  +   E    +   Q    + ++KL            I     E  T+ SPIAG
Sbjct: 117 QAELDVIDQELERLNAIANQQLVSQETLAKLVYRRQAALADRDIAALQLEYSTVASPIAG 176

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            +V  +       A +   L  IV      +    +  +++  V+ G +A +        
Sbjct: 177 -VVAKRFVKRGKMASEMDALFHIV-QQDTLHGILHLPERELSKVRPGQSAELTVDGLDTP 234

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +    +A + +I P++            +++ L I      +   EL+ G 
Sbjct: 235 Q----RAQVLRIAPVVDPDTGT------FKITLSID-----NQQGELKAGM 270


>gi|304436758|ref|ZP_07396726.1| secretion protein HlyD [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370238|gb|EFM23895.1| secretion protein HlyD [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 396

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 65/186 (34%), Gaps = 4/186 (2%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+I+  D V  I+S  SG I +  +  G  +  G PL   +  +    +   K ++    
Sbjct: 56  GQIMGTDEVK-IQSRVSGNIVEKYITGGQPVRAGQPLYRIDARQYESALLQAKANLAQSE 114

Query: 108 CHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             +   +  LD    L     + E+   +++ Q+  +     +  + V     +    ++
Sbjct: 115 ATLANARMDLDRYQQLYANAAISEQTVSNQQAQVNAYEAAVAAHQAMVQQAQENLDDTTI 174

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
              ++   S+    +     +     +       +    +L E   ++  +   Q+  + 
Sbjct: 175 YAPMSGQLSVNDVAVGTFVSAGTTTLVSMGASNPIYAQFSLSENEYLNFVEQAAQQGGIG 234

Query: 225 KSTLEL 230
              +EL
Sbjct: 235 SVVVEL 240



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 70/254 (27%), Gaps = 28/254 (11%)

Query: 177 NRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE 236
             +  +      R   +  +K +T  + +     + + D  Q E  + ++   L ++   
Sbjct: 57  QIMGTDEVKIQSRVSGNIVEKYITGGQPVRAGQPLYRIDARQYESALLQAKANLAQSEAT 116

Query: 237 QKNMLRHINELYDEANLEFANYL--KEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             N    ++           +          +   +   A   + +   ++  +  TI +
Sbjct: 117 LANARMDLDRYQQLYANAAISEQTVSNQQAQVNAYEAAVAAHQAMVQQAQENLDDTTIYA 176

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT---PKQIQHVK-------K 344
           P++G  +     +   +         +V       I A+ +    + +  V+        
Sbjct: 177 PMSGQ-LSVNDVAVGTFVSAGTT--TLVSMGASNPIYAQFSLSENEYLNFVEQAAQQGGI 233

Query: 345 GYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIE 404
           G +  V        +       I   D  ++ Q   L                F + +  
Sbjct: 234 G-SVVVELTLSNGSKYP-ITGRIATADRALTAQTGTLTV-----------KALFDNPDGL 280

Query: 405 LRNGFPAEVLFTAK 418
           L  G  A V     
Sbjct: 281 LLPGMFARVTLIGD 294


>gi|291407062|ref|XP_002719843.1| PREDICTED: citron isoform 1 [Oryctolagus cuniculus]
          Length = 2055

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 7/188 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ++    DL D  K S++NL    + E      + ++   +  A +S+   L   + + 
Sbjct: 770 VLDNQIKKDLAD--KESLENLMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVEL 827

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                   N  + +  R++K +   +  +   +  LE ++  L A     ++ L   + +
Sbjct: 828 SEANKLAANSSLFT-QRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQL---EKI 883

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             ++   +N L + E  + + +LE  E   E K  L  +     E   +    L+     
Sbjct: 884 SHQDHSDKNRLLELETRLREVSLEHEEQKLELKRQLTELQLSLQERESQLT-ALQAARAA 942

Query: 266 LEQNQRTF 273
           LE   R  
Sbjct: 943 LESQLRQA 950



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 3/207 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESREEQLLDFL 142
              +     D +  K+   +  R  +  EKS  +    +   +   EK   +R +Q +   
Sbjct: 1069 VMDLEALNDELLEKERQWEAWRSVLGDEKSQFECRVRELQRMLDTEKQSRARADQRITES 1128

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +      K     I ++ ++LK +  +  S+     DLE K ++L     S Q+ L   
Sbjct: 1129 RQVVELAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQKLETE 1188

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            + L ++    Q  L QQ  +       L + + E  +    +     +   +  N     
Sbjct: 1189 RELKQRLLEEQAKLQQQMDLQKNHIFRLTQGLQEALDRADLLKTERSDLEYQLENIQVLY 1248

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQ 289
            S +  + + T + +   +  L+   +Q
Sbjct: 1249 SHEKVKMEGTISQQTKLIDFLQAKMDQ 1275



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/247 (11%), Positives = 72/247 (29%), Gaps = 40/247 (16%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-----------LDFLNNKYDVLEKAFES 133
            L     E    +   + +   L   +   K+            +  L    D +++ F++
Sbjct: 922  LQLSLQERESQLTALQAARAALESQLRQAKTELEETTAEAEEEIQALTAHRDEIQRKFDA 981

Query: 134  REE------QLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                      L + L +     +++ N    +S            +  +      L  + 
Sbjct: 982  LRNSCTVITDLEEQLNQLTEDNAELNNQNFYLSKQLDEASGANDEIVQLRSEVDHLRREI 1041

Query: 186  SLLRALLSSHQKDLTMMKN---LFEKNAVSQN----DLNQQERIVYK------------- 225
            +     L+S ++ +  +K    + E+  +       +L ++ER                 
Sbjct: 1042 TEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDELLEKERQWEAWRSVLGDEKSQFE 1101

Query: 226  -STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                EL+  +  +K      ++   E+       +KE   ++   Q+   ++  K   L 
Sbjct: 1102 CRVRELQRMLDTEKQSRARADQRITESRQVVELAVKEHKAEILALQQALKEQKLKAESLS 1161

Query: 285  KTREQKT 291
                   
Sbjct: 1162 DKLNDLE 1168


>gi|282856634|ref|ZP_06265903.1| efflux transporter, RND family, MFP subunit [Pyramidobacter
           piscolens W5455]
 gi|282585544|gb|EFB90843.1| efflux transporter, RND family, MFP subunit [Pyramidobacter
           piscolens W5455]
          Length = 390

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 59/222 (26%), Gaps = 32/222 (14%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             V   D   +         + R   ++     +  +ELY +  +  A Y       L  
Sbjct: 99  GRVDPRDFRTRLTQAQAVLAQARAQYNDAATNFKRYDELYRQKVIAAAQYDA-YKTQLNV 157

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKI------- 321
            +       ++            + +P  G +V   +    +     QP++ +       
Sbjct: 158 ARSAVQQAEAQARTAADALRDTELRAPFDGVVVDRMAEKFQDVL-PKQPVLSLQDISTLE 216

Query: 322 ----VPHSKLTY--IRAKVTPKQIQHVKK--GYTATVRFPHYADIREKKFKAIIEKIDPI 373
               VP   +    + A +  + +       G  A  RF                ++   
Sbjct: 217 IVFAVPDKDVLSAPVPAGIDARDLARYAASFGMEA--RFDAIGGRAFP------VRLKEF 268

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            +Q D   +T   Y V + +           +  G    V  
Sbjct: 269 AAQADPRTKT---YPVTVVMPQ----PEGARVLPGMAVTVTV 303



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 38/110 (34%), Gaps = 4/110 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  VE G  + +G  L   +  +    +   +  +   R   +   +       +
Sbjct: 78  SGPLLELPVEKGVAVKKGDLLGRVDPRDFRTRLTQAQAVLAQARAQYNDAATNFK----R 133

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           YD L +       Q   +  + +   S V      +   +  ++ T +R+
Sbjct: 134 YDELYRQKVIAAAQYDAYKTQLNVARSAVQQAEAQARTAADALRDTELRA 183


>gi|268316211|ref|YP_003289930.1| chromosome segregation protein SMC [Rhodothermus marinus DSM 4252]
 gi|262333745|gb|ACY47542.1| chromosome segregation protein SMC [Rhodothermus marinus DSM 4252]
          Length = 1185

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 74/211 (35%), Gaps = 8/211 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK------AFESREEQLL 139
                +T   +D  +  +  LR  I+  +  +D L  + D  E+         + E+ LL
Sbjct: 171 KLRRTQTLRKLDATRGDLTRLRDLIEEVRRQVDTLKRQADRAERFRRYRDELRALEQALL 230

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
                     +      +  V   L+   TR  ++   + +L+ + +     L + Q+ L
Sbjct: 231 RHDYDRLREQADALEALLDEVQTRLREARTRYETLEAEQTELQQQLTQTETALEAAQERL 290

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANY 258
             ++N  +    S+  L  +     +S  E L+    E ++  + + +  + A       
Sbjct: 291 HALQNRLQA-LDSEGRLLDERLQAARSEQERLQREAKEAEHQEQRLRQALEAAETAVREA 349

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +          ++      +    LE+ RE+
Sbjct: 350 MPRHEAAEAALRQALEARDAAQHALEQQRER 380



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 63/204 (30%), Gaps = 1/204 (0%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            E  +        ++   +    +  E+        +    E      +EQ L    +  
Sbjct: 283 LEAAQERLHALQNRLQALDSEGRLLDERLQAARSEQERLQREAKEAEHQEQRLRQALEAA 342

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
            T  +       +   +L+  L    +          +    R LL   ++ L   +   
Sbjct: 343 ETAVREAMPRHEAAEAALRQALEARDAAQHALEQQRERVREARRLLQQAEQTLHEARRQL 402

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           ++ + ++ +L +QER    +  +  +   +     +       +   +    L++    L
Sbjct: 403 DRQS-NRRELLEQERERLDAEQKTLDAQLQTLETEQEETLRKRKTARQTCERLRKEIEAL 461

Query: 267 EQNQRTFADEMSKLTILEKTREQK 290
           E  ++    E++        RE++
Sbjct: 462 EARRQALRQEIAARNEALHRRERR 485



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/202 (10%), Positives = 64/202 (31%), Gaps = 7/202 (3%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           + + +  +      + E+   +      +   L +A E+ E  + + + ++ +  + +  
Sbjct: 303 EGRLLDERLQAARSEQERLQREAKEAEHQEQRLRQALEAAETAVREAMPRHEAAEAALRQ 362

Query: 155 Y--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                 +   +L+ +  R+R         E      R  L        +++   E+    
Sbjct: 363 ALEARDAAQHALEQQRERVREARRLLQQAEQTLHEARRQLDRQSNRRELLEQERERLDAE 422

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS---RDLEQN 269
           Q  L+ Q + +     E        +     + +  +          +EI+     L + 
Sbjct: 423 QKTLDAQLQTLETEQEETLRKRKTARQTCERLRKEIEALEARRQALRQEIAARNEALHRR 482

Query: 270 QRTFADEMSKLTILEKTREQKT 291
           +R      ++  +LE+      
Sbjct: 483 ERRLEAVQAEARLLEQVLTAYE 504



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 72/225 (32%), Gaps = 11/225 (4%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             +  E  + +  +  S++     +  E++ L+       +    F++R + L +     
Sbjct: 671 RLDRRERLNALQTEAASLETEIARLRDERATLE-----QQLQALPFDTRRQALREAEQAL 725

Query: 146 HSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +   +         S+ + L+   TR   +   +  L  +   LR  L   ++ +   +
Sbjct: 726 RTLEQQATRHEATRESLRQRLEALKTRRTQLDEAQATLAAELQTLRQTLMEAEQTVAERQ 785

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
              ++   +        R   +   +++    E +N L ++     +         +   
Sbjct: 786 RALQEAEAALQQAEADYRATMEQLNQVQLQAAETRNRLDNLRREQQQLRQRLEGLQRRQQ 845

Query: 264 RDLEQ----NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
              +Q      R   D+  + TI  +   +   L P    +   +
Sbjct: 846 ERAQQQKQLATRLAQDQERRRTIEAERNARSAELPPAEAEVQRLR 890


>gi|220934901|ref|YP_002513800.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219996211|gb|ACL72813.1| efflux transporter, RND family, MFP subunit [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 402

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/241 (11%), Positives = 70/241 (29%), Gaps = 16/241 (6%)

Query: 42  ISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKV 101
             +  +G ++    V EI    +G + +  V+ G  + +G  L   +        D  + 
Sbjct: 60  EVLRFTGSLVAASRV-EITPRVAGRLDRVFVDIGDTVRRGDLLARLDT-------DAFEQ 111

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            ++  R  +   ++ L       +   +A     E     +       +        +  
Sbjct: 112 ELQQSRAELAVARAGLAEAEASLEAARRALVRTRELRAQRVASQSELEAAETEVQAQAAR 171

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV--------SQ 213
             L     + R   L    +    + LRA       +  + +   ++  +        + 
Sbjct: 172 LELARSQIQQREAALAGAQIRLSYTELRAQWHGDDTERLVAERYADEGVILQANSPVLAL 231

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
            + N    +V+ +  +       Q+ +LR      +      +    E      Q +   
Sbjct: 232 VEPNPLRAVVFVTERDYARLAPGQEAILRAEAYPGERFTGALSRLAPEFRETSRQARVEI 291

Query: 274 A 274
           +
Sbjct: 292 S 292



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/231 (11%), Positives = 64/231 (27%), Gaps = 27/231 (11%)

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            + +++L   +           +         ++ +  RE   ++      +     E  
Sbjct: 107 DAFEQELQQSRAELAVARAGLAEAEASLEAARRALVRTRELRAQRVASQSELEAAETEVQ 166

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG----TIVYNQSFSS 308
            + A         LE  +       + L   +       + +   G     +V  +    
Sbjct: 167 AQAAR--------LELARSQIQQREAALAGAQIRLSYTELRAQWHGDDTERLVAERYADE 218

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
               Q + P++ +V           VT +    +  G  A +R   Y   R   F   + 
Sbjct: 219 GVILQANSPVLALV-EPNPLRAVVFVTERDYARLAPGQEAILRAEAYPGER---FTGALS 274

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
           ++ P   +     +            +++  ++ + LR G   E       
Sbjct: 275 RLAPEFRETSRQARV-----------EISVPNDELRLRPGMFVEASIQVSR 314


>gi|119480447|ref|XP_001260252.1| hypothetical protein NFIA_083060 [Neosartorya fischeri NRRL 181]
 gi|119408406|gb|EAW18355.1| hypothetical protein NFIA_083060 [Neosartorya fischeri NRRL 181]
          Length = 506

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 72/226 (31%), Gaps = 11/226 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +T +  +  K  +      I+  +  L  L      +E      E   L          +
Sbjct: 72  KTLNEANRLKNILAASSHEIENLRGELASLG--KTAVESKRMVDENIRLSKELSNLQLEA 129

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           + F     S   ++  K    R +      LEN+        S   +    + NL  +  
Sbjct: 130 ERFRVQSISSQNTVAEKQALRRQLITVEEQLENEKRAHERAQSRETRQAGEIANLSSRLE 189

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            ++ +L +Q +   +     R+  HE +     + E  ++ N +    L+++   L++ Q
Sbjct: 190 EARKELAEQIQARERQERSARQQKHESEAQRAALEERIEDLNRK----LRQVKDQLQEAQ 245

Query: 271 RTFADEMSKLTILEKTREQKTILSPIA---GT--IVYNQSFSSSNY 311
                + +KL      +      +P     GT  +      +    
Sbjct: 246 SNGQQQRNKLKATGSPQPHAKSRAPANRTMGTQFVPALTIATPGAI 291


>gi|82703092|ref|YP_412658.1| secretion protein HlyD [Nitrosospira multiformis ATCC 25196]
 gi|82411157|gb|ABB75266.1| Secretion protein HlyD [Nitrosospira multiformis ATCC 25196]
          Length = 362

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 46/130 (35%), Gaps = 4/130 (3%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +++G + +   +V ++   S +I    +  G  + +G PL T +       +   +  + 
Sbjct: 36  AANGTV-SAQQMVAVRPQLSAMISAVHIREGQFVRKGEPLFTLDARTEDANVRRTEGQLA 94

Query: 105 NLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
             R  +   +  L+     +    + + A +  E Q+     +     +      I+  +
Sbjct: 95  KSRADLRNAERNLERQRELFRQDFISQAALDVAENQVDALRAQLTVDEATAQANRIARGF 154

Query: 162 RSLKMKLTRM 171
             +   ++  
Sbjct: 155 SEITAPISGR 164


>gi|74000801|ref|XP_544699.2| PREDICTED: similar to cingulin-like 1 [Canis familiaris]
          Length = 1224

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 66/201 (32%), Gaps = 11/201 (5%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
               +  + S      H+   +   + L    + LE++    + Q+ D          ++
Sbjct: 730 ASRSNTSEQSQLGAEMHVKALQEENEKLRESIEELEQSVARLQRQIADMKDDEVKAKERL 789

Query: 153 F--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                    +  +L       R     R  LE +   ++  LS   ++   +    +   
Sbjct: 790 TKCERENRQLEEALVNARKEEREATSVRRTLEGELEDVQRNLSRATQEQKQLSEKLKDET 849

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD----EANLEFANYLKEISRDL 266
             +  L + +  +      L + I + +  +  I E+      E   +   Y ++  R+L
Sbjct: 850 EQKEQLRRLKNEMENERWHLDKTIEKLQKEMADIVEVSRVSTLELQNQLDEYKEKNRREL 909

Query: 267 EQNQRTFAD-----EMSKLTI 282
            + QR   +     E S+LT 
Sbjct: 910 AEMQRQLKEKTLEAEKSRLTA 930



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 75/226 (33%), Gaps = 4/226 (1%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V+N   I +    +     E     D K      L+  ++  +  L     +   ++
Sbjct: 625 QLEVKNQQNIKEERERMKANLEELQGQHDSKVEENSMLQQRLEESEGELRKNLEELFQVK 684

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E  + ++ D   +      +  +    S  R     +  +  +       E      
Sbjct: 685 MEREQHQTEIRDLQDQLSEMHDE-LDSAKRSEDREKGALIENVEVLASRSNTSEQSQLGA 743

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              + + Q++   ++   E+   S   L +Q   +    ++ +E + + +   R + E  
Sbjct: 744 EMHVKALQEENEKLRESIEELEQSVARLQRQIADMKDDEVKAKERLTKCERENRQLEEAL 803

Query: 249 ---DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               +   E  +  + +  +LE  QR  +    +   L +  + +T
Sbjct: 804 VNARKEEREATSVRRTLEGELEDVQRNLSRATQEQKQLSEKLKDET 849



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 73/208 (35%), Gaps = 8/208 (3%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++ +  +  +L ++  +     ++ EKS L  +      L+      EE+L D+    
Sbjct: 897  QLDEYKEKNRRELAEMQRQLKEKTLEAEKSRLTAMK-----LQDEMRLMEEELRDYQRAQ 951

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                +K     +    + L+ +L     +  +R  L  +     + L    ++     +L
Sbjct: 952  DEALTK--RQLLEQTLKDLEYELEAKSHLKDDRSRLVKQMEDKVSQLEMELEEERNNSDL 1009

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIH-EQKNMLRHINELYDEANLEFANYLKEISR 264
              +      +  +Q R        L++++  ++ ++ R   +L         +Y      
Sbjct: 1010 LSERITRSREQMEQMRSELLQERALKQDLECDKISLERQNKDLKSRIIHLEGSYRSSKEG 1069

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTI 292
             + Q +   A+   +L   E+ R    +
Sbjct: 1070 LVVQMEARIAELEDRLENEERDRASLQL 1097



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 59/192 (30%), Gaps = 12/192 (6%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             ++ Q    L  E  E  +  DL    I   R  ++  +S L         LE    S E
Sbjct: 991  DKVSQ----LEMELEEERNNSDLLSERITRSREQMEQMRSELLQERALKQDLECDKISLE 1046

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             Q  D   +        +      +   ++ ++  +     N         L    L   
Sbjct: 1047 RQNKDLKSRIIHLEG-SYRSSKEGLVVQMEARIAELEDRLENEERDRASLQLSNRRLERK 1105

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
             K+L M     +   +S   L  Q+  +      ++  + E +  +  +     +   E 
Sbjct: 1106 VKELVMQ---VDDEHLS---LTDQKDQLSLRLKAMKRQVEEAEEEIDRLESSKKKLQREL 1159

Query: 256  ANYLKEISRDLE 267
               + +++  L+
Sbjct: 1160 EEQM-DVNEQLQ 1170


>gi|47575800|ref|NP_001001244.1| myosin, heavy chain 4, skeletal muscle [Xenopus (Silurana)
            tropicalis]
 gi|45595719|gb|AAH67305.1| myosin heavy chain [Xenopus (Silurana) tropicalis]
          Length = 1935

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 75/214 (35%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   L+  ID   S L+ ++     LEK     E+QL +   K 
Sbjct: 1206 QIDNLQRVKQKLEKEKS--ELKMEIDDLASNLENVSKSKANLEKVNRVIEDQLSEVKAKD 1263

Query: 146  H---------STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                      ST           + R L+ + + +  +   +     +   L+  L    
Sbjct: 1264 DEHQRLLNDLSTQKARLQTETGELSRQLEERESLISQLSRGKQGFTQQVEELKRQLEEET 1323

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+ ++ +    +      Y+   ++  
Sbjct: 1324 KAKNALAHALQSARHDCDLLREQFEEEQEAKAELQRSLSKANGEVSQWRTKYETDAIQRT 1383

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L+E  + L Q  +   +++  +     + E+ 
Sbjct: 1384 EELEEAKKKLAQRLQDAEEQVEAVNSKCASLEKT 1417



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 69/208 (33%), Gaps = 17/208 (8%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  +T + +  K   I  L+  I+ E+S    L  K   L+   E  EE++         
Sbjct: 1072 DKQQTEEKLKKKDFEISQLQGKIEDEQSLGTQLQKKIKELQARIEEVEEEIEAERAARAK 1131

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
               +     +S     +  +L         ++++  K       L    ++ T+      
Sbjct: 1132 VEKQ--RADLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKLRRDLEEATLQHEATA 1189

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS---- 263
                         +    S  EL E I   + + + + +   E  +E  +    +     
Sbjct: 1190 ---------GALRKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDLASNLENVSK 1240

Query: 264  --RDLEQNQRTFADEMSKLTILEKTREQ 289
               +LE+  R   D++S++   +   ++
Sbjct: 1241 SKANLEKVNRVIEDQLSEVKAKDDEHQR 1268


>gi|15596428|ref|NP_249922.1| hypothetical protein PA1231 [Pseudomonas aeruginosa PAO1]
 gi|107100680|ref|ZP_01364598.1| hypothetical protein PaerPA_01001706 [Pseudomonas aeruginosa PACS2]
 gi|218892792|ref|YP_002441661.1| putative membrain protein [Pseudomonas aeruginosa LESB58]
 gi|254239598|ref|ZP_04932920.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|9947160|gb|AAG04620.1|AE004552_10 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|126192976|gb|EAZ57039.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218773020|emb|CAW28832.1| putative membrain protein [Pseudomonas aeruginosa LESB58]
          Length = 302

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 59/207 (28%), Gaps = 20/207 (9%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V +   EL +     +            A       +    R L   +       + L 
Sbjct: 84  AVRQREAELEQARETLRQRDEQWRRRMQLAGAVSREEVANAGRALRIARARAEAAGAALD 143

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                  +  + SP+ G +   +     +YA   +  + IV   +  ++       ++++
Sbjct: 144 QARLDLRRSELRSPVDGYVTQLRV-QPGDYAAAGRTNIFIV-DRRSFWVTGYFEETKLRN 201

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ------QDNNLQTQEYY-------E 388
           V+ G  AT++   +           +  I   ++            Q    +        
Sbjct: 202 VQVGAPATIKLMGFD----PLLDGHVASIGRGVADLNESRADSGLPQVSPNFSWIRLAQR 257

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLF 415
           V ++I +L      + L  G    V  
Sbjct: 258 VPVRI-ELDRVPAGVVLAAGMTGSVEV 283



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 44/122 (36%), Gaps = 6/122 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               V+ I    SG ++   V +  ++ +G PL   +       +  ++  ++  R   +
Sbjct: 41  VSAQVIRIAPEVSGSVEAVFVADNQRVARGDPLYRIDPRSYRLAVRQREAELEQAR---E 97

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T +   +    +  +   A     E++ +         ++    G +     L ++ + +
Sbjct: 98  TLRQRDEQWRRRMQL---AGAVSREEVANAGRALRIARARAEAAGAALDQARLDLRRSEL 154

Query: 172 RS 173
           RS
Sbjct: 155 RS 156


>gi|330827796|ref|YP_004390748.1| membrane fusion protein family auxiliary transport protein
           [Aeromonas veronii B565]
 gi|328802932|gb|AEB48131.1| Auxiliary transport protein, membrane fusion protein (MFP) family
           [Aeromonas veronii B565]
          Length = 322

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 45/170 (26%), Gaps = 13/170 (7%)

Query: 20  MTLLSIIGIIGLITWSILLPIEISVSSSGEIL---NEDNVVEIKSPFSGIIKKFQVENGS 76
           +  L +  I G + W           + G IL    +   V +     G + +  V+ G 
Sbjct: 7   IVALLLTVIGGYLWW-------QGRPADGSILYGNVDIRDVNLAFRVGGRVDQVLVDEGD 59

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++  G  L   +    T   D  + ++  L                       A      
Sbjct: 60  RVKAGQLLARLDPAPLTHSRDSARANLAALTAANALIHKGYRSEETDRARAALAAAEAAA 119

Query: 137 QLLDFLGKYHSTCS---KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              D   +  S  +    +    + +          ++RS       LE 
Sbjct: 120 LEADQQWRRQSALAATGAISRGQLDTARSQRDQTRAQVRSAREQLAQLET 169



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 67/202 (33%), Gaps = 16/202 (7%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS-RDLEQNQRTFADE 276
           +++  +  +    R  +   ++           A  + A         ++ Q+       
Sbjct: 127 RRQSALAATGAISRGQLDTARSQRDQTRAQVRSAREQLAQLETGYRPEEIAQSDAQLEGA 186

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + L   E      ++ +P  G I+  ++  + +  Q       +   +   ++RA V  
Sbjct: 187 KAALASAELALADASLTAPSDGIIIS-RAIENGSMVQSGATAFNLS-LTAPVWVRAYVEE 244

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII-----SQQDNNLQTQEYYEVIL 391
             + H   G  A V         ++ +  ++  + P       S +  +L+T   Y + +
Sbjct: 245 PWLGHFPSG--ARVTLTT-DSRPDQPYHGVVGFVSPTAEFTPKSVETPDLRTHLVYRLRI 301

Query: 392 KITDLAFSDNNIELRNGFPAEV 413
            + D   +     LR G P  V
Sbjct: 302 VVQDPDPA-----LRQGMPVTV 318


>gi|301771622|ref|XP_002921226.1| PREDICTED: myosin-3-like isoform 1 [Ailuropoda melanoleuca]
          Length = 1940

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 80/229 (34%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ ++     LEK   S E+QL +  GK 
Sbjct: 1207 QIDNLQRVKQKLEKEKS--EFKLEIDDLSSNVESVSKSKANLEKICRSLEDQLSEARGKN 1264

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                + R L+ K + +  +  ++     +   L+  L    
Sbjct: 1265 EEVQRSMSELATQKSRLQTEAGELSRQLEEKESIVSQLSRSKQAFTQQIEELKRQLEEES 1324

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  + +    + L +Q     +S  EL+  + +  + +      Y+   ++  
Sbjct: 1325 KAKNALAHALQSSRHDCDLLREQYEEEQESKAELQRALSKANSEVAQWRTKYETDAIQRT 1384

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1385 EELEEAKKKLAQRLQDSEEQVEAVNAKCASLEKTKQR--LQGEVEDLMV 1431



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 81/216 (37%), Gaps = 10/216 (4%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
               L  +D         +++++   R ++   ++ ++ L    +  E+A +  E++LLD 
Sbjct: 1653 DTQLHLDDALRGQEDLKEQLAMVERRANL--LQAEVEELRASLEQTERARKLAEQELLDA 1710

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                 +   ++ +   +S+  + K   T +  +     D    +            D  M
Sbjct: 1711 -----NERVQLLHTQNTSLIHTKKKLETDLTQLQSEVEDASRDARNAEEKAKKAITDAAM 1765

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            M    +K   +   L + ++ + ++  +L+  + E + +         +   +    ++E
Sbjct: 1766 MAEELKKEQDTSAHLERMKKNMEQTVKDLQHRLDEAEQLALK---GGKKQIQKLETRIRE 1822

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +  +LE  Q+   + +  L   E+  ++ T  S   
Sbjct: 1823 LEFELEGEQKKNTESVKGLRKYERRVKELTYQSEED 1858



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 16/212 (7%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             + L + SI +L          L   + +Y  L+   E  +   L F  K     +++  
Sbjct: 1059 DLKLAQESILDLENDKQQLDERLKKKDFEYSQLQSKVEDEQTLGLQFQKKIKELQARIEE 1118

Query: 155  YGISSVYRSL-KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT---------MMKN 204
                       + K  + RS Y   L+  ++       ++S Q +L          M ++
Sbjct: 1119 LEEEIEAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFQKMRRD 1178

Query: 205  LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS- 263
            L E     +  L    +    S  EL E I   + + + + +   E  LE  +    +  
Sbjct: 1179 LEEATLQHEAMLATLRKKHADSMAELGEQIDNLQRVKQKLEKEKSEFKLEIDDLSSNVES 1238

Query: 264  -----RDLEQNQRTFADEMSKLTILEKTREQK 290
                  +LE+  R+  D++S+     +  ++ 
Sbjct: 1239 VSKSKANLEKICRSLEDQLSEARGKNEEVQRS 1270



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 69/203 (33%), Gaps = 14/203 (6%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            L  +  +    ++      +N         T+ + +     K        E  ++ +   
Sbjct: 1731 LETDLTQLQSEVEDASRDARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQT 1790

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            +        +     +    + ++   TR+R +     +LE +       +   +K    
Sbjct: 1791 VKDLQHRLDEAEQLALKGGKKQIQKLETRIRELEF---ELEGEQKKNTESVKGLRKYERR 1847

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +K L  ++   + ++ + + +V K  +++       K+  R   E  ++AN     + K 
Sbjct: 1848 VKELTYQSEEDRKNVLRLQDLVDKLQVKV-------KSYKRQAEEADEQANAHLTKFRK- 1899

Query: 262  ISRDLEQNQRTFADEMSKLTILE 284
               +LE+ +       S++  L 
Sbjct: 1900 AQHELEEAEERADIAESQVNKLR 1922


>gi|322421054|ref|YP_004200277.1| RND family efflux transporter MFP subunit [Geobacter sp. M18]
 gi|320127441|gb|ADW15001.1| efflux transporter, RND family, MFP subunit [Geobacter sp. M18]
          Length = 373

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 67/202 (33%), Gaps = 22/202 (10%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL------EQNQR 271
           +  R V K  L + ++   +K  L       + A        + +   +      E    
Sbjct: 86  EAGRPVQKGELLVAQDTSSEKAQLAGALAQAELARSTLERTERLLPERIASPADHESALA 145

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
                +++   L    E+K I +P  G  +  +  +     ++  P++ +       Y+ 
Sbjct: 146 AREQALAQAASLRAAMEKKEIRAPFGGR-LGIRQVNLGQMLREGDPVVTLQALD-PIYVD 203

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVIL 391
             +  +QI  + +     V       +   +    +  ++P+I  Q  N++ Q       
Sbjct: 204 FSLPQQQIGALSRDLPVKVMVDALPGL---EVAGRVTALNPLIDAQTRNIRVQ------- 253

Query: 392 KITDLAFSDNNIELRNGFPAEV 413
                  ++ + +LR G    V
Sbjct: 254 ----ATLANRDEKLRPGMFVNV 271


>gi|261204035|ref|XP_002629231.1| spindle-pole body protein [Ajellomyces dermatitidis SLH14081]
 gi|239587016|gb|EEQ69659.1| spindle-pole body protein [Ajellomyces dermatitidis SLH14081]
          Length = 1236

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 56/198 (28%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             + +  ++ +  L    D  +        + D+     E +E Q        +    + 
Sbjct: 237 AAIQENTELKVTKLTMERDLHQCKKSLRRAEQDLAGCQVELQELQAQANRRHVNENVQRE 296

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
            +     +             +   + +       LR  +   Q DL     L E     
Sbjct: 297 LDQMREDLESKENELHELQEELESMKENESESLQQLREEIQDLQYDLRQKNELVENQKEE 356

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +L ++++    S  EL   +   K  L  + +  +EA  E      +    +E+ ++ 
Sbjct: 357 IENLKEKQQDEKSSVAELEAELQRAKEQLEDLQKSLEEARSEAREAKSKCEEAIEEKEQA 416

Query: 273 FADEMSKLTILEKTREQK 290
             D       +       
Sbjct: 417 VKDLKELQDEMTDKSFYT 434



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/216 (9%), Positives = 63/216 (29%), Gaps = 10/216 (4%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG---- 143
           +        + ++  + +++  +   +     L  K   LE      +  L +       
Sbjct: 688 DIASKRQAAESQRQELLSVKEELRAARREESSLREKLQALEDDIVVLQATLEEERAFAGN 747

Query: 144 ------KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
                        +  N        +L      + ++ +   +LE +   L++ +   Q 
Sbjct: 748 QQKSGASDLEKQLQAANKERQVARDNLANANIEIHNLRMASAELEAERDELQSQIRRIQG 807

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +     L ++    +    + E  + +   E R  +  +  +   ++     A  E   
Sbjct: 808 QVDDTYRLDQEKIDLRKSKLRLENELSRLRDEKRTLLETKDKLQADLDNEIVRAAAEENR 867

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
              EI +  ++   +      +L       E+  + 
Sbjct: 868 LSGEIDQLQDKIFMSSERRDRELVAARSKAERLELR 903



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 70/217 (32%), Gaps = 12/217 (5%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           + NG        L T  D  T +   L++  +   +  I   +  ++   ++Y       
Sbjct: 526 IRNGE--NAKDVLKTRHDALTNESASLQR-DLAQAKTRISNLEEQIEAERDQYMNDTDKL 582

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             +    LD L     +                    +  RS+ L +  +E +++  +  
Sbjct: 583 RLQHRNQLDQLHDEIESLKHDIEDREGQHATDRDRWDSLKRSLELQKEKVEQQAAGYKRT 642

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLEL-RENIHEQKNMLRHINELYDE 250
           +   Q   T + +  +K      ++ + E+  +    EL    I E  + +    +  + 
Sbjct: 643 IDKLQNVETTLSSREDK----LQNIIESEKQRHLQDEELLNRQIKELNDDIASKRQAAES 698

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              E  +    +  +L   +R  +    KL  LE   
Sbjct: 699 QRQELLS----VKEELRAARREESSLREKLQALEDDI 731



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 71/209 (33%), Gaps = 13/209 (6%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
            + + +  S++ LR  I   +  L   N   +  ++  E+ +E+  D         +++ 
Sbjct: 320 SMKENESESLQQLREEIQDLQYDLRQKNELVENQKEEIENLKEKQQDEKSSVAELEAELQ 379

Query: 154 NY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT--------MMK 203
                +  + +SL+   +  R       +   +       L   Q ++T        + +
Sbjct: 380 RAKEQLEDLQKSLEEARSEAREAKSKCEEAIEEKEQAVKDLKELQDEMTDKSFYTKGLSR 439

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI- 262
            L EK    +++LN+  +         +    E   +   I  L ++ + E A    +I 
Sbjct: 440 QLEEKAHKLEDELNKLRKEHNVLEENFQSKTREVAMLEDEIEGLKEDLSAEKARMQDDID 499

Query: 263 --SRDLEQNQRTFADEMSKLTILEKTREQ 289
               + +  +R   D   +L   +     
Sbjct: 500 LAQHERDIARRERDDISERLHHADDDIRN 528


>gi|171702770|dbj|BAG16353.1| myosin heavy chain [Coryphaenoides acrolepis]
          Length = 1934

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L D+  KY    +++   G  
Sbjct: 1413 LEKTKQRLQGEVEDLMVDVERANGLAANLDKKQRNFDKVLADWKQKYEEGQAEL--EGAQ 1470

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD  N  ++ R   +  Q+   + + + E    S ++L +
Sbjct: 1471 KEARSLSTELFKMKNSYEETLD--NLETMKRENKNLQQEISDLTEQIGETGK-SIHELEK 1527

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      E+ R L +          
Sbjct: 1528 SKKQVETEKSEIQSALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQIKR 1587

Query: 278  --SKLTILEKTREQKTILS 294
               ++    +T     + S
Sbjct: 1588 NSQRIIDSMQTTLDSEVRS 1606



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 84/241 (34%), Gaps = 22/241 (9%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREEQLLD 140
            L  +  ++   +  +  +++ ++  ++ EKS     +D L++  + + K+  + E+    
Sbjct: 1191 LRKKQADSVAELGEQIDNLQRVKQKLEKEKSEFKMEIDDLSSNMEAVSKSKGNLEKICRT 1250

Query: 141  FLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
               ++    +K       I+ +       LT          + E   S L     +  + 
Sbjct: 1251 LEDQFSEIKAKSDENVRQINDISAQRARLLTENGEFSRQLEEKEALVSQLTRGKQAFTQQ 1310

Query: 199  LTMMKNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +K   E+   ++N L               +Q     ++  EL+  + +  + +   
Sbjct: 1311 IEELKRQNEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQW 1370

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               Y+   ++    L+E  + L Q  +   +++  +     + E+      + G +    
Sbjct: 1371 RSKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLM 1428

Query: 305  S 305
             
Sbjct: 1429 V 1429



 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 66/224 (29%), Gaps = 15/224 (6%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             G   L    ++  E+ +      +KK   +  +     E         +  + E     
Sbjct: 1055 EGDLKLAQESIMDLENEKQQSDEKIKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1114

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             E +      +      +     ++     +  +L         ++++  K         
Sbjct: 1115 EELEEEIEAERAARAKVEKLRADLARELEEISERLEEAGGATSAQIEMNKKREA------ 1168

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               +   + ++L E     +       +    S  EL E I   + + + + +   E  +
Sbjct: 1169 ---EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEFKM 1225

Query: 254  EFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQKT 291
            E  +    +        +LE+  RT  D+ S++        ++ 
Sbjct: 1226 EIDDLSSNMEAVSKSKGNLEKICRTLEDQFSEIKAKSDENVRQI 1269


>gi|161986508|ref|YP_311017.2| multidrug efflux system subunit MdtA [Shigella sonnei Ss046]
          Length = 413

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I+   N V ++S   G +     + G Q+  G  L   +  
Sbjct: 62  AATA-VEQAVPRYLTGLGTIIAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 119

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 120 QFKVALAQTQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 175

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 176 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 208



 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 25/218 (11%), Positives = 63/218 (28%), Gaps = 56/218 (25%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 120 QFKVALAQTQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 179

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
           +     +                                                +   I
Sbjct: 180 DEASVASAQLQ-------------------------------------------LDWSRI 196

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQP--LMKIV---PHSKLTYIRAKVTPKQIQHVKKGYT 347
            +P+ G +   +     N         ++ I    P          +    I  V +   
Sbjct: 197 TAPVDGRV-GLKQVDVGNQISSGDTTGIVVITQTHPID--LVFT--LPESDIATVVQAQK 251

Query: 348 A--TVRFPHYADIREKKF-KAIIEKIDPIISQQDNNLQ 382
           A  T+    +     KK  +  +  +D  I      ++
Sbjct: 252 AGKTLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIK 289


>gi|160896996|ref|YP_001562578.1| RND family efflux transporter MFP subunit [Delftia acidovorans
           SPH-1]
 gi|160362580|gb|ABX34193.1| efflux transporter, RND family, MFP subunit [Delftia acidovorans
           SPH-1]
          Length = 402

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 75/207 (36%), Gaps = 29/207 (14%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI--SRDLEQNQRTF----- 273
            ++   + E+     E       +     E + +   +  EI   +D E  Q++      
Sbjct: 140 ALITMDSSEISSVRAEHAKSQAALLHARQEFDRQKLLFDAEIAARKDYEAAQQSLAAAGA 199

Query: 274 -----ADEMSKLTILEKTREQ--KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
                +D +S+L    +   +    + SPI+G +V         +   +  +M  V   +
Sbjct: 200 DARAASDHLSQLGAAVQEGSRGSYVVKSPISGRVVEMAGSQGGYWNDVNASVMT-VADLR 258

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
             ++ A V+ + + HV  G  A +    Y D++    +  ++ +  ++     ++     
Sbjct: 259 KVWLSASVSERDLAHVDVGQQAHIALAAYPDLQ---LQGRVQYVGELVDTATRSV----- 310

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEV 413
            +V + + +         LR G  A V
Sbjct: 311 -KVRVAVDNPE-----GRLRPGMFARV 331



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 2/130 (1%)

Query: 36  ILLPIEISVSSSGEILNE-DNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
            L P++  +S+   I  E + +V I  P +G + +   + G  +  G  L+T +  E + 
Sbjct: 92  ALQPLQTRLSAPATIEAEPEKLVRITPPVAGRLVRLHHQLGDAVKAGDALITMDSSEISS 151

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
           +      S   L  H   E      L +      K +E+ ++ L        +    +  
Sbjct: 152 VRAEHAKSQAAL-LHARQEFDRQKLLFDAEIAARKDYEAAQQSLAAAGADARAASDHLSQ 210

Query: 155 YGISSVYRSL 164
            G +    S 
Sbjct: 211 LGAAVQEGSR 220


>gi|13474602|ref|NP_106171.1| RND efflux membrane fusion protein [Mesorhizobium loti MAFF303099]
 gi|14025356|dbj|BAB51957.1| RND efflux membrane fusion protein [Mesorhizobium loti MAFF303099]
          Length = 352

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 61/189 (32%), Gaps = 10/189 (5%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF---L 120
            G I +  V+ G  + QG  L   +  E    +   +  +   R  +    +A +    L
Sbjct: 60  GGRIAERLVDVGQHVDQGAVLARIDPQEQQSDLRSAQADLDAARAQLTQSAAAFERQKTL 119

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM---RSIYLN 177
             +     + +++ ++ L    G   +  S   N   +  +  LK     +   R +   
Sbjct: 120 LAQGFTTRRDYDAADQALKVAQGSVDAAQSAFANAQQNLSFTELKAGAPGVITARQVETG 179

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKN----AVSQNDLNQQERIVYKSTLELREN 233
           ++    ++    A          + + L  +     AV+   L+  +        E+   
Sbjct: 180 QVVQAAQTVFTVAEDGDRDAVFNVQETLVARTPASPAVTITLLSDPQVRATGKVREISPV 239

Query: 234 IHEQKNMLR 242
           + +    +R
Sbjct: 240 VDQASGSIR 248


>gi|88858561|ref|ZP_01133203.1| hypothetical protein PTD2_14264 [Pseudoalteromonas tunicata D2]
 gi|88820178|gb|EAR29991.1| hypothetical protein PTD2_14264 [Pseudoalteromonas tunicata D2]
          Length = 353

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 76/218 (34%), Gaps = 31/218 (14%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           ++ +K  V     ++QE+    +  EL+ N+ E++  L  + EL        A       
Sbjct: 89  DIVKKGQVLVQLNSEQEK---SAVAELQINLKEEQRQLNRLTEL--------AKSQATAK 137

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             LE+ +  F     +L        + TI +P +G  +  +  S   +   +    +I  
Sbjct: 138 SLLEEQRSKFEATQVQLASATIKLAEMTITAPFSGR-LGQRLISPGAFITSAN---EITT 193

Query: 324 HSK--LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
                   +   V  K +  +K     T + P Y DI    F  ++  I   I+    + 
Sbjct: 194 LDDISTIKVDFNVPEKYLAALKPNMVVTAKSPAYPDIT---FSGVLSNISSRINPATRS- 249

Query: 382 QTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
                    + +T  +F + N +LR+G           
Sbjct: 250 ---------VPVT-ASFDNKNQQLRSGMLLHTFVKLSE 277



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 34/92 (36%), Gaps = 3/92 (3%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           IKS  +  + +    +G  + +G  L+     +    +   ++++K  +  ++       
Sbjct: 72  IKSAQNDYVTEVFFNDGDIVKKGQVLVQLNSEQEKSAVAELQINLKEEQRQLNRLTELAK 131

Query: 119 FLNNKYDVLEKA---FESREEQLLDFLGKYHS 147
                  +LE+    FE+ + QL     K   
Sbjct: 132 SQATAKSLLEEQRSKFEATQVQLASATIKLAE 163


>gi|171702772|dbj|BAG16354.1| myosin heavy chain [Coryphaenoides cinereus]
          Length = 1934

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L D+  KY    +++   G  
Sbjct: 1413 LEKTKQRLQGEVEDLMVDVERANGLAANLDKKQRNFDKVLADWKQKYEEGQAEL--EGAQ 1470

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD  N  ++ R   +  Q+   + + + E    S ++L +
Sbjct: 1471 KEARSLSTELFKMKNSYEETLD--NLETMKRENKNLQQEISDLTEQIGETGK-SIHELEK 1527

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      E+ R L +          
Sbjct: 1528 SKKQVETEKSEIQSALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQIKR 1587

Query: 278  --SKLTILEKTREQKTILS 294
               ++    +T     + S
Sbjct: 1588 NSQRIIDSMQTTLDSEVRS 1606



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 85/241 (35%), Gaps = 22/241 (9%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREEQLLD 140
            L  +  ++   +  +  +++ ++  ++ EKS     +D L++  + + K+  + E+    
Sbjct: 1191 LRKKQADSVAELGEQIDNLQRVKQKLEKEKSEFKMEIDDLSSNMEAVSKSKGNLEKICRT 1250

Query: 141  FLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
               +++   +K       I+ +       LT          + E   S L     +  + 
Sbjct: 1251 LEDQFNEIKAKSEENVRQINDISAQRARLLTENGEFSRQLEEKEALVSQLTRGKQAFTQQ 1310

Query: 199  LTMMKNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +K   E+   ++N L               +Q     ++  EL+  + +  + +   
Sbjct: 1311 IEELKRQNEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQW 1370

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               Y+   ++    L+E  + L Q  +   +++  +     + E+      + G +    
Sbjct: 1371 RSKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLM 1428

Query: 305  S 305
             
Sbjct: 1429 V 1429



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/224 (10%), Positives = 67/224 (29%), Gaps = 15/224 (6%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             G   L    ++  E+ +      +KK   +  +     E         +  + E     
Sbjct: 1055 EGDLKLAQESIMDLENEKQQSDEKIKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1114

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             E +      +      +     ++     +  +L         ++++  K         
Sbjct: 1115 EELEEEIEAERAARAKVEKLRADLARELEEISERLEEAGGATSAQIEMNKKREA------ 1168

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               +   + ++L E     +       +    S  EL E I   + + + + +   E  +
Sbjct: 1169 ---EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEFKM 1225

Query: 254  EFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQKT 291
            E  +    +        +LE+  RT  D+ +++    +   ++ 
Sbjct: 1226 EIDDLSSNMEAVSKSKGNLEKICRTLEDQFNEIKAKSEENVRQI 1269


>gi|171702766|dbj|BAG16351.1| myosin heavy chain [Coryphaenoides yaquinae]
          Length = 1933

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L D+  KY    +++   G  
Sbjct: 1412 LEKTKQRLQGEVEDLMVDVERANGLAANLDKKQRNFDKVLADWKQKYEEGQAEL--EGAQ 1469

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD  N  ++ R   +  Q+   + + + E    S ++L +
Sbjct: 1470 KEARSLSTELFKMKNSYEETLD--NLETMKRENKNLQQEISDLTEQIGETGK-SIHELEK 1526

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      E+ R L +          
Sbjct: 1527 SKKQVETEKSEIQSALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQIKR 1586

Query: 278  --SKLTILEKTREQKTILS 294
               ++    +T     + S
Sbjct: 1587 NSQRIIDSMQTTLDSEVRS 1605



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 84/241 (34%), Gaps = 22/241 (9%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREEQLLD 140
            L  +  ++   +  +  +++ ++  ++ EKS     +D L++  + + K+  + E+    
Sbjct: 1190 LRKKQADSVAELGEQIDNLQRVKQKLEKEKSEFKMEIDDLSSNMEAVSKSKGNLEKICRT 1249

Query: 141  FLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
               ++    +K       I+ +       LT          + E   S L     +  + 
Sbjct: 1250 LEDQFSEIKAKSDENVRQINDISAQRARLLTENGEFSRQLEEKEALVSQLTRGKQASTQQ 1309

Query: 199  LTMMKNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +K   E+   ++N L               +Q     ++  EL+  + +  + +   
Sbjct: 1310 IEELKRQNEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQW 1369

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               Y+   ++    L+E  + L Q  +   +++  +     + E+      + G +    
Sbjct: 1370 RSKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLM 1427

Query: 305  S 305
             
Sbjct: 1428 V 1428



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 75/226 (33%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTFEDI--ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++  E+   ++ + I  K+     L   I+ E+S    L  K   L+   
Sbjct: 1054 EGDLKLAQESVMDLENEKQQSDEKIKKKEFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1113

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     ++     +  +L         ++++  K       
Sbjct: 1114 EELEEEIEAERAARAKVEKQ--RADLARELEEISERLEEAGGATSAQIEMNKKREA---- 1167

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +   +   +    S  EL E I   + + + + +   E 
Sbjct: 1168 -----EFQKLRRDLEESTLQHEATASALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEF 1222

Query: 252  NLEFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +    +        +LE+  RT  D+ S++        ++ 
Sbjct: 1223 KMEIDDLSSNMEAVSKSKGNLEKICRTLEDQFSEIKAKSDENVRQI 1268


>gi|146313312|ref|YP_001178386.1| p-hydroxybenzoic acid efflux subunit AaeA [Enterobacter sp. 638]
 gi|167017128|sp|A4WF55|AAEA_ENT38 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|145320188|gb|ABP62335.1| efflux transporter, RND family, MFP subunit [Enterobacter sp. 638]
          Length = 310

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 70/220 (31%), Gaps = 27/220 (12%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQ-KNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           Q  L + E  V        E   E  +     I  +  E   +  N L+ +   L + + 
Sbjct: 84  QKALEESEADVAYYQALTTEKRREAGRRNKLGIQAMSREEIDQSNNLLQTVLHQLAKAEA 143

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           T         + +   E+  I +P  G +     ++   +  +    + +V      Y+ 
Sbjct: 144 TR-------DLAKLDLERTVIRAPSDGWVTNLNVYT-GEFITRGSTAVALVKQHS-FYVL 194

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV-- 389
           A +   +++ V+ GY A +        R    K  ++ I   ++       ++    V  
Sbjct: 195 AYMEETKLEGVRPGYRAEI--TPLGSNR--VLKGTVDSIAAGVTNSSATRDSKGMATVDS 250

Query: 390 ---------ILKITDLAFSDNNIELRN-GFPAEVLFTAKN 419
                     + +  +   D    L   G  A V+ T + 
Sbjct: 251 NLEWVRLAQRVPV-RIRLDDEQGNLWPAGTTATVVITGEK 289



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 48/154 (31%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L RN   +   + L+ +  I     W            + +     ++V I    +G+
Sbjct: 2   KTLTRNISRTAITVALVILAFIAISRAWVFYTE----SPWTRDARFSADIVAIAPDVAGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I    V +   + +   L T +       ++  +  +   +  + TEK       NK  +
Sbjct: 58  ITAVNVRDNQLVKKDQVLFTIDQPRYQKALEESEADVAYYQA-LTTEKRREAGRRNKLGI 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 117 QAMSREEIDQSNNLLQTVLHQLAKAEATRDLAKL 150


>gi|308809017|ref|XP_003081818.1| Myosin class II heavy chain (ISS) [Ostreococcus tauri]
 gi|116060285|emb|CAL55621.1| Myosin class II heavy chain (ISS) [Ostreococcus tauri]
          Length = 5463

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 68/207 (32%), Gaps = 4/207 (1%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L   E+++   L D        L   +    + L+ + +     + A ES  + L   L 
Sbjct: 3691 LHELEEVQAASLSDFD-SQRAALEEQLAARDADLERVRSDRAERQSALESERDGLRAELD 3749

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               S   ++     +S+      +      +     +LE   S      S+ + +   ++
Sbjct: 3750 ALVSKLHELEEVQAASLSDFDSQRAALEEQLAARDAELERVRSDQSERQSALEFERDGLR 3809

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
               +   VS+  LN+ E +   S  +        +  L   +   +    + +     + 
Sbjct: 3810 AELDA-LVSK--LNELEEVQAASLSDFDSQRAALEEQLAARDAELERVRSDQSERQSALE 3866

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQK 290
             + +  +      +SKL  LE+ +   
Sbjct: 3867 FERDGLRAELDALVSKLNELEEVQAAS 3893



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 70/204 (34%), Gaps = 4/204 (1%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L   E+++   L D        L   +    + L+ + +     + A E   + L   L 
Sbjct: 3755 LHELEEVQAASLSDFD-SQRAALEEQLAARDAELERVRSDQSERQSALEFERDGLRAELD 3813

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
               S  +++     +S+      +      +     +LE   S      S+ + +   ++
Sbjct: 3814 ALVSKLNELEEVQAASLSDFDSQRAALEEQLAARDAELERVRSDQSERQSALEFERDGLR 3873

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
               +   VS+  LN+ E +   S  +        +  L   +   +   ++F   +  I 
Sbjct: 3874 AELDA-LVSK--LNELEEVQAASLSDFDSQRAALEEQLAARDAELEGVRVQFEAEIAAIL 3930

Query: 264  RDLEQNQRTFADEMSKLTILEKTR 287
             +   ++        +L+++EK R
Sbjct: 3931 SERCAHEEELDRMQRRLSLVEKER 3954



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 62/202 (30%), Gaps = 17/202 (8%)

Query: 93  TDLIDLKKVSIKNLRCHIDTE-KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
              +   +  ++  R  +  E ++ +D LNN+ D + K  E    ++ D   +       
Sbjct: 727 RKQLAEAQEQLEAQRVELKREAQAEIDALNNEMDSIRKEMEQLATEMSDKTRQGLD---- 782

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +   +      +K       S      D + K + +   L + Q+ L     L      
Sbjct: 783 -YRKQVEERQSEIKALKRCEESASRALADSKAKLAQVEEELEAKQRVLQERIELAANQ-- 839

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
                 + E  +  S  EL       +  L  +    D   +E    L +   ++E  + 
Sbjct: 840 -----TELESKLADSEAELER----VRQDLSSLKNERDSIEIELERVLSDELPEVEHLRS 890

Query: 272 TFADEMSKLTILEKTREQKTIL 293
             A   S+  +L          
Sbjct: 891 RLATVESERDVLRTELSDAMSR 912



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 65/207 (31%), Gaps = 14/207 (6%)

Query: 98   LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR--EEQLLDFLGKYHSTCSKVFNY 155
                 +K L   +++   ALD    +     +A      E   L    +   +  +V   
Sbjct: 3303 ESISRVKYLEAQLESVSDALDSKETELKHSAQALVEMRHERDYLQSELQRLESERQVAID 3362

Query: 156  GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK------------ 203
              +++       L ++     NR  LE + + L       +K     +            
Sbjct: 3363 ARAALDNDASNALAQLDESIENRNQLELRLAELVKRHDDLEKSSETQRVKLQKQCDSLTA 3422

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E ++V +    + E  +   + EL  +    +  L   +   +    + +     + 
Sbjct: 3423 KLEELSSVEELKRAELEGKLDGQSAELDRSRATLEEKLAARDAELERVRSDQSERQSALE 3482

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQK 290
             + +  +      +SKL  LE+ +   
Sbjct: 3483 FERDGLRAELDALVSKLHELEEVQAAS 3509



 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/202 (10%), Positives = 70/202 (34%), Gaps = 18/202 (8%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             + +   + I L+    + ++  I+ E +++  L      +++A +++ + L +     
Sbjct: 564 ELDTVRERERIALEDWRKERVKLEIELE-ASVKELQTATRTVDEALKAKMDLLAELQSAE 622

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             + S      I  +    +    +++S+     D       +    S  + +L      
Sbjct: 623 EKSESDA--QIIQRLEHETRTLQAKLQSLSAQLSDANASIEQINGRRSDLEAEL------ 674

Query: 206 FEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
                  Q  + + E  +     +  + +   E  ++   +N L ++   E ++    + 
Sbjct: 675 -------QIKVAELEAALSHDAADSLVEDLKREVDSLNVELNMLREQRAAEMSDVELLLR 727

Query: 264 RDLEQNQRTFADEMSKLTILEK 285
           + L + Q     +  +L    +
Sbjct: 728 KQLAEAQEQLEAQRVELKREAQ 749


>gi|15838975|ref|NP_299663.1| membrane fusion protein precursor [Xylella fastidiosa 9a5c]
 gi|9107562|gb|AAF85183.1|AE004047_14 membrane fusion protein precursor [Xylella fastidiosa 9a5c]
          Length = 411

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 43/135 (31%), Gaps = 4/135 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
            ++ G +    N V I    SG +       G  + +G  L   +        D    + 
Sbjct: 63  AAAPGTV-AALNTVTINPQVSGQLISLHFREGESVKKGQLLAEIDARALQASYDQAAAAK 121

Query: 104 KNLRCHIDTEKS---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
           +  +  + T ++       L  +  V +   +++  Q+  +     +  + +    +   
Sbjct: 122 RQNQALLATARANYTRSSTLEYQPYVAKTELDTQHNQVTQYEAAVAANEAAMRAAQVQLQ 181

Query: 161 YRSLKMKLTRMRSIY 175
           Y  +   +  +  I 
Sbjct: 182 YTKIVAPIDGVAGIR 196


>gi|332247233|ref|XP_003272757.1| PREDICTED: chromosome-associated kinesin KIF4A [Nomascus
           leucogenys]
          Length = 1195

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 64/186 (34%), Gaps = 8/186 (4%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             + I+     ++K++ ++ +    + E+  L+    K D  +     R  + L  L   
Sbjct: 510 QLQPIQYQYQDNIKELELEVINLQKEKEELVLELQTAKKDANQAKLSERRRKRLQELEGQ 569

Query: 146 HSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENK-SSLLRALLSSHQKD 198
            +   K  N          S  R++      +R +   R+ L  +            QK 
Sbjct: 570 IADLKKKLNEQSKLLKLKESTERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKK 629

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +  L E++   Q +L + ER   K +  LR    E     + + +   +   E A+ 
Sbjct: 630 DKEVIQLKERDRKRQYELLKLERNFQKQSSVLRRKTEEAAAANKRLKDALQKQR-EVADK 688

Query: 259 LKEISR 264
            KE   
Sbjct: 689 RKETQS 694



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/234 (11%), Positives = 87/234 (37%), Gaps = 14/234 (5%)

Query: 71  QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
            VE   ++ +G      +  +  + I L + + + +   ++  +       +   ++E  
Sbjct: 356 LVEENEKLSRGLSEAAGQTAQMLERIILTEQANEKMNAKLEELRQHAACKLDLQKLVETL 415

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN----RLDLENKSS 186
            +   ++ ++ +       +++ +  ++ V  ++   + +   +  +    R      + 
Sbjct: 416 EDQELKENVEIICNLQQLITQLSDETVACVAAAIDTVVEQEAQVETSPETSRSSDAFTTQ 475

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                    ++ + + K L  K A+++  + Q +  +     + ++NI E +  + ++ +
Sbjct: 476 HALRQAQMSKELVELNKALALKEALAR-KMTQNDSQLQPIQYQYQDNIKELELEVINLQK 534

Query: 247 LYDEANLEFANYLKEI---------SRDLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  LE     K+           + L++ +   AD   KL    K  + K 
Sbjct: 535 EKEELVLELQTAKKDANQAKLSERRRKRLQELEGQIADLKKKLNEQSKLLKLKE 588


>gi|238764595|ref|ZP_04625541.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Yersinia
           kristensenii ATCC 33638]
 gi|238697185|gb|EEP89956.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Yersinia
           kristensenii ATCC 33638]
          Length = 311

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 55/173 (31%), Gaps = 12/173 (6%)

Query: 204 NLFEKN----AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            L +K      + Q    Q            +    E++        L  +A  +    +
Sbjct: 67  QLVQKGQILFVIDQPRYQQALAEAEADVAYYQTLAAEKQRESGRRQRLGVQALSQ--EEI 124

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            + S  L+  +   A  ++   + +    + T+ +P  G +      +   +  +    +
Sbjct: 125 DQSSNVLQTVRHQLAKAIAVRDLAQLDLARTTVRAPAEGWVTNLNVHA-GEFINRGATAV 183

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
            +V      YI A +   +++ VK GY A +        R       ++ I  
Sbjct: 184 ALV-KKDTFYILAYLEETKLEGVKPGYRAEI--TPLGSNR--ILHGTVDSISA 231



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 45/146 (30%), Gaps = 6/146 (4%)

Query: 16  SLKRMTLLSIIGIIG-LITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVEN 74
            +    L+ ++ +I     W+           + +     +VV I    SG+I    V++
Sbjct: 10  RIGITLLVVLLAVIAVFKVWAFYTE----SPWTRDAKFTADVVAIAPDVSGLITDVPVKD 65

Query: 75  GSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESR 134
              + +G  L   +       +   +  +   +  +  EK        +  V   + E  
Sbjct: 66  NQLVQKGQILFVIDQPRYQQALAEAEADVAYYQT-LAAEKQRESGRRQRLGVQALSQEEI 124

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSV 160
           ++         H     +    ++ +
Sbjct: 125 DQSSNVLQTVRHQLAKAIAVRDLAQL 150


>gi|228473268|ref|ZP_04058022.1| efflux transporter, RND family, MFP subunit [Capnocytophaga
           gingivalis ATCC 33624]
 gi|228275170|gb|EEK13968.1| efflux transporter, RND family, MFP subunit [Capnocytophaga
           gingivalis ATCC 33624]
          Length = 359

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 11/136 (8%)

Query: 45  SSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIK 104
           +++G  + E ++  + S   G I K  V+ G  +  G  L        T   D   V + 
Sbjct: 59  TANGTFVAEQDL-NVSSETGGQIVKIYVKEGDYVKAGQVL-------ATTKADRTNVQLD 110

Query: 105 NLRCHIDTEKSALDFLNNKYD---VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           N R  ++T KS L    + Y    V  +  E  + Q+ +    Y+S      +  + S  
Sbjct: 111 NARAVLETAKSDLKRFESAYQTGGVTARQLEQAQLQVKNAQANYNSAAIISGDTSVRSKI 170

Query: 162 RSLKMKLTRMRSIYLN 177
             +           +N
Sbjct: 171 SGIVSSKEVEEGTLVN 186



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 67/218 (30%), Gaps = 20/218 (9%)

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           K  V + D  +  +++  +  +      +    +    +   +            +R LE
Sbjct: 82  KIYVKEGDYVKAGQVLATTKADRTNVQLDNARAVLETAKSDLKRFESAYQTGGVTARQLE 141

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q Q    +  +            ++ S I+G +   +           QPL  +V +   
Sbjct: 142 QAQLQVKNAQANYNSAAIISGDTSVRSKISGIVSSKEV-EEGTLVNPGQPLFNVV-NIDN 199

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
             ++  V   Q+  +K G T  V+         +  +  I  I P  +            
Sbjct: 200 LKLKITVDEAQVSKLKVGQTIEVK----PSTSSETVEGKIVFIAPKSNGALKFPV----- 250

Query: 388 EVILKITDLAFSDNNIELRNGFPAEVLF--TAKNTTLA 423
                  ++  ++ + +L+ G  A   F    + TT  
Sbjct: 251 -------EILVANKDKKLKAGMYASAQFAGQTEATTAL 281


>gi|227538895|ref|ZP_03968944.1| RND family efflux transporter, MFP component [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227241404|gb|EEI91419.1| RND family efflux transporter, MFP component [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 417

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 14/204 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL--RCHIDTEKSALDFLN 121
            G +++  VE+G+ + +G P++   + +    +  ++ S+ NL  +  I    +    +N
Sbjct: 81  GGRVEEKYVEDGAFLKKGDPIMRLSNTDQELSLVNQETSVLNLLTQSQIAQTNAQQVSIN 140

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM----RSIYLN 177
           N+  + +     +E Q +  L K       + +            +  RM    + +  +
Sbjct: 141 NRNQLADVENGLKEAQRIYQLNKKLFEEKAIGSQEYQKTVNDYLYQKERMELTRKILQQD 200

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            L    K    R +    Q+ L +M+         + D       V          I + 
Sbjct: 201 SLSTNQKVKQDRQMYERTQRALELMRK--------KVDDLVVRAPVDGQLTSFDSEIGQN 252

Query: 238 KNMLRHINELYDEANLEFANYLKE 261
           KN    + ++      +    + E
Sbjct: 253 KNSGERLGQIDVLTGFKVRADVDE 276



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 67/211 (31%), Gaps = 26/211 (12%)

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           ++          +SV   L        +     ++  N+ + +   L   Q+   + K L
Sbjct: 106 NTDQELSLVNQETSVLNLLTQSQIAQTNAQQVSINNRNQLADVENGLKEAQRIYQLNKKL 165

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           FE+ A+   +  +                  QK  +    ++  + +L     +K+  + 
Sbjct: 166 FEEKAIGSQEYQKTVNDYLY-----------QKERMELTRKILQQDSLSTNQKVKQDRQM 214

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
            E+ QR        L ++ K  +   + +P+ G +    S          + L +I    
Sbjct: 215 YERTQRA-------LELMRKKVDDLVVRAPVDGQLTSFDS-EIGQNKNSGERLGQI---- 262

Query: 326 KLTY---IRAKVTPKQIQHVKKGYTATVRFP 353
            +     +RA V    I  +      ++   
Sbjct: 263 DVLTGFKVRADVDEHYISRIYNDLQGSINIS 293


>gi|220678335|emb|CAX14186.1| golgi autoantigen, golgin subfamily a, 5 [Danio rerio]
 gi|220678364|emb|CAX13149.1| golgi autoantigen, golgin subfamily a, 5 [Danio rerio]
          Length = 760

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/204 (11%), Positives = 74/204 (36%), Gaps = 7/204 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCS 150
           +  +   +  +++    +  E+ +   + +++       E+  + L + L   +   T  
Sbjct: 375 SQAVQTLQDRLRDAEAAVKREQESYRQIQSEFAARLAKVEAERQTLAESLTNAERRLTEE 434

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K     +    +S +      R    +  +  ++    +  L +  K+ + ++ L  + A
Sbjct: 435 KQRAEDLQQQAKSSRSAAEYTRQELQDYKNKASRILQSKEKLINSLKEGSGLEVL--EGA 492

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEISRDLE 267
            +  +L +          E+++   + +++   I +L  +A  E   +   L E+     
Sbjct: 493 GAGVELEELRHEKELQREEIQKLQAQIQSLRTEIQDLETQALTENESWREQLAEVQEQHA 552

Query: 268 QNQRTFADEMSKLTILEKTREQKT 291
           Q  R   +  ++L   ++  +   
Sbjct: 553 QQIRAKQEIEAELERSKQELQYIE 576



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 68/215 (31%), Gaps = 10/215 (4%)

Query: 82  TPLLTFEDIETTDLIDLKKVS--IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            P+L  +  +       +     I NLR      ++ +  LN +   L +  +  +E++ 
Sbjct: 232 QPVLEIQSQDLQQQQQQQGQEHVISNLRLENQLLRNEVSSLNQEMASLIQRAKDMQEEV- 290

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             LG+  +         +    R L  ++  +      +   + + ++L+  L    + L
Sbjct: 291 -NLGRARADKWNSDQSRVDRTVRELSSQVDDLTEALSAK---DGQLAVLKVRLDEADQLL 346

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
               +  E+    +  + Q             + +   ++ LR            +    
Sbjct: 347 KARSSALEEAQNERVRILQDHSEGSSLH---SQAVQTLQDRLRDAEAAVKREQESYRQIQ 403

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E +  L + +         LT  E+   ++   +
Sbjct: 404 SEFAARLAKVEAERQTLAESLTNAERRLTEEKQRA 438


>gi|157273413|gb|ABV27312.1| chromosome segregation protein SMC [Candidatus Chloracidobacterium
           thermophilum]
          Length = 1261

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/227 (10%), Positives = 64/227 (28%), Gaps = 14/227 (6%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE-- 136
                L T E  +T           +    + +  +          +  ++  +      
Sbjct: 737 SAAQTLATLEQKQTQTAAQRLAAQQRCDALNAELRRLEAQHAAQAVEAAQRRRDVERAHQ 796

Query: 137 --QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
              ++       +  +       +++   L   +T+  +     L  + + + LR  + +
Sbjct: 797 HMNVVAAERSQLAAEADQLAPRRTTLEAELAKAITQREAAEQAMLVAQQRLAQLRPAVEA 856

Query: 195 HQKDLTMMKNLF----EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
               L  ++       E++  ++ +L + ER   +    L     EQ  +    ++   E
Sbjct: 857 AAHVLAELRTQAASKLERHRAAEGELRRLEREWREVEQRLAHLALEQAALRTCRHDREQE 916

Query: 251 ANLEFANYLKEI------SRDLEQNQRTFADEMSKLTILEKTREQKT 291
                             S  L   +   AD    L  L+  ++   
Sbjct: 917 HAACLNQAAVAEATVVAASEQLASAEARLADLRHVLETLDHEQQATQ 963



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 63/216 (29%), Gaps = 18/216 (8%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD-----VLEKAFESREE 136
             L                   + LR      +SA   L            ++    +  
Sbjct: 704 QVLGARRLTAGRGTAKSILRVKRELRALRAEAQSAAQTLATLEQKQTQTAAQRLAAQQRC 763

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             L+   +             +   R ++     M  +   R  L  ++  L    ++ +
Sbjct: 764 DALNAELRRLEAQHAAQAVEAAQRRRDVERAHQHMNVVAAERSQLAAEADQLAPRRTTLE 823

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            +L   K + ++ A  Q  L  Q+R        L +     +     + EL  +A  +  
Sbjct: 824 AELA--KAITQREAAEQAMLVAQQR--------LAQLRPAVEAAAHVLAELRTQAASKLE 873

Query: 257 NYLKEISRDLEQNQRTFADEMSKLT--ILEKTREQK 290
            +      +L + +R + +   +L    LE+   + 
Sbjct: 874 RHRA-AEGELRRLEREWREVEQRLAHLALEQAALRT 908


>gi|110807741|ref|YP_691261.1| hypothetical protein SFV_3948 [Shigella flexneri 5 str. 8401]
 gi|110617289|gb|ABF05956.1| putative membrane protein [Shigella flexneri 5 str. 8401]
          Length = 378

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 72/226 (31%), Gaps = 27/226 (11%)

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNA 210
           +   +  +   +     + R++     ++   +   +A      K+       +  + N 
Sbjct: 99  YQARVDRLMADIVTAEHKQRALGAELDEMAANTQQAKATRDKFAKEYQRYARGSQAKVNP 158

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            S+ D++   +        ++ +  EQK +   ++ L                  L ++ 
Sbjct: 159 FSERDIDVARQNYLAQEASVKSSAAEQKQIQSQLDSLV-----------------LGEH- 200

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ--QSQPLMKIVPHSKLT 328
              A   ++L   +   EQ  + +P  G +          YA     +P+M  +P  K  
Sbjct: 201 SQIASLKAQLAEAKYNLEQTIVRAPSDGYVTQVLIR-PGTYAASLPLRPVMVFIPDQKRQ 259

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            + A+     +  +     A V F        K F   +  I P +
Sbjct: 260 IV-AQFRQNSLLRLAPSDDAEVVFNALP---GKVFSGKLAAISPAV 301



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 2/152 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +    +G++ +   +  + I +G  L   +       +D     I           + LD
Sbjct: 66  VVPQVTGVVIEVTDKKNTLIKKGEVLFRLDPTRYQARVDRLMADIVTAEHKQRALGAELD 125

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
            +       +   +   ++   +     +  +      I    ++   +   ++S    +
Sbjct: 126 EMAANTQQAKATRDKFAKEYQRYARGSQAKVNPFSERDIDVARQNYLAQEASVKSSAAEQ 185

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             ++++   L  +L  H +  ++   L E   
Sbjct: 186 KQIQSQLDSL--VLGEHSQIASLKAQLAEAKY 215


>gi|332524541|ref|ZP_08400747.1| secretion protein HlyD family protein [Rubrivivax benzoatilyticus
           JA2]
 gi|332107856|gb|EGJ09080.1| secretion protein HlyD family protein [Rubrivivax benzoatilyticus
           JA2]
          Length = 375

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 61/205 (29%), Gaps = 17/205 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDLEQNQRTFAD 275
                +  +   +R +    +   R +  L    +  +     L++        Q     
Sbjct: 99  ALRESLASAEESVRASTQAWEQAERQVQRLKTLQQQGMISTQALEDAEIRRNNTQSELVA 158

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
             ++     +   +  + +P  G +   +  S  +  Q  + L+K+V           V+
Sbjct: 159 ARARAVSARQQVTRTLVRAPFDGIVSERRV-SVGDTVQIGRELVKVV-DPASMRFEGLVS 216

Query: 336 PKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
             ++  +K G         Y      +F   + +ID   +     +       +I+   D
Sbjct: 217 ADRVAELKTGQAVRFHVNGYGRD---EFSGRVRRIDATANATTRQVA------LIVDFAD 267

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNT 420
            A +        G  AE      +T
Sbjct: 268 AAQAPR----VAGLFAEGRVETGST 288



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 62/183 (33%), Gaps = 4/183 (2%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
           NG  + +G  L+  +D    + +   + S++      +  +  +  L      L++    
Sbjct: 82  NGEPVRRGDLLMRLDDTALRESLASAEESVRASTQAWEQAERQVQRLK----TLQQQGMI 137

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             + L D   + ++T S++      +V    ++  T +R+ +   +     S      + 
Sbjct: 138 STQALEDAEIRRNNTQSELVAARARAVSARQQVTRTLVRAPFDGIVSERRVSVGDTVQIG 197

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
                +    ++  +  VS + + + +               E    +R I+   +    
Sbjct: 198 RELVKVVDPASMRFEGLVSADRVAELKTGQAVRFHVNGYGRDEFSGRVRRIDATANATTR 257

Query: 254 EFA 256
           + A
Sbjct: 258 QVA 260


>gi|327313326|ref|YP_004328763.1| RND family efflux transporter MFP subunit [Prevotella denticola
           F0289]
 gi|326945603|gb|AEA21488.1| efflux transporter, RND family, MFP subunit [Prevotella denticola
           F0289]
          Length = 459

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/168 (10%), Positives = 49/168 (29%), Gaps = 7/168 (4%)

Query: 42  ISVSSSGEILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
            + ++  +      +  ++        SG I K  V  G  +  G  L   ++      +
Sbjct: 55  GASNAQLKTTYPATIKGVQDVEVRPKVSGFITKLNVHEGEYVRAGQVLFVIDNATYQAAV 114

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              +  + + +  +   ++ +   N   +       +      +    Y++    + +Y 
Sbjct: 115 RQAQAQVNSAQSSVAQAQAGVVQANASLNSANAQAATSRLTYSNSKNLYNNKV--IGDYE 172

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           + S   + +     +R                 A +   Q  L   K+
Sbjct: 173 LQSAKNAYETAQAAVRQAQSGVASANAAVRQAEAGVRQAQAVLASAKD 220


>gi|261339211|ref|ZP_05967069.1| hypothetical protein ENTCAN_05439 [Enterobacter cancerogenus ATCC
           35316]
 gi|288319060|gb|EFC57998.1| macrolide efflux protein MacA [Enterobacter cancerogenus ATCC
           35316]
          Length = 371

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 73/254 (28%), Gaps = 51/254 (20%)

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           +    ++R +    ++L  + S   A  +  Q  LT  + L +  A+S+ DL+     + 
Sbjct: 95  EQAENQIREVEATLMELRAQRSQALAERNLAQVTLTRQQALAKTQAISKQDLDTAATELA 154

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
               ++     + K                                         L   +
Sbjct: 155 VKQAQIGTIDAQIKRNQAS------------------------------------LDTAK 178

Query: 285 KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHV 342
              +   I++P+AG +    +          Q   ++ +        ++A+V+   + H+
Sbjct: 179 TNLDYTKIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQVSEADVIHL 237

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNN 402
           K G  A          R        E +   I      +    +Y    ++      +  
Sbjct: 238 KPGQKAWFTVLGDPQTRY-------EGVLKDILPTPEKVNDAIFYYARFEVP-----NPQ 285

Query: 403 IELRNGFPAEVLFT 416
             LR    A+V   
Sbjct: 286 GVLRLDMTAQVHIQ 299



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 62/177 (35%), Gaps = 8/177 (4%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             ++ +V ++G++     V ++ +  SG +K   VE G ++ +G  L   +  +  + I 
Sbjct: 44  GELQQNVLATGKLDALRKV-DVGAQVSGQLKTLSVEIGDKVKKGQLLGVIDPEQAENQIR 102

Query: 98  LKKVSIKNLRC---HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV-- 152
             + ++  LR        E++       +   L K     ++ L     +     +++  
Sbjct: 103 EVEATLMELRAQRSQALAERNLAQVTLTRQQALAKTQAISKQDLDTAATELAVKQAQIGT 162

Query: 153 FNYGISSVYRSLKMKLTRMR--SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
            +  I     SL    T +    I         + + L+       +    +  L +
Sbjct: 163 IDAQIKRNQASLDTAKTNLDYTKIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLAD 219


>gi|224085002|ref|XP_002195849.1| PREDICTED: protein tyrosine phosphatase, receptor type, f
           polypeptide (PTPRF), interacting protein (liprin), alpha
           1 [Taeniopygia guttata]
          Length = 1142

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 67/202 (33%), Gaps = 3/202 (1%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E  +L++ +   +   +  I    +++  L        K     EE    +        
Sbjct: 231 VELQELLEKQNFEVVQAKERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDLREAL 290

Query: 150 SKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++       I+++ +          SI+     LEN+ +   +L    ++    ++ L E
Sbjct: 291 AQKEDMEERITTLEKRYLAAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLE 350

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
                     ++   + +   EL + I          +   +E   +    L+E +++L 
Sbjct: 351 LAEQKLQQTMRKAETLPEVEAELAQRIAALTKAKER-HGSIEEHLRQLETQLEEKNQELA 409

Query: 268 QNQRTFADEMSKLTILEKTREQ 289
           + ++           L  T ++
Sbjct: 410 RARQREKMNEEHNKRLSDTVDR 431



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 73/213 (34%), Gaps = 12/213 (5%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           + T E+        +  +   + R     E+   +       +  K    R  +L + L 
Sbjct: 179 VATLEEQLVDAHRQVAALQQGSSREPAAGEREEREPKEAPPKLPWKDEAGRVVELQELLE 238

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           K +    +     IS++  S+      + +   + +  E  SS  +  L   ++ L   +
Sbjct: 239 KQNFEVVQA-KERISALAASVAELEEDLGTARKDLIKSEEMSSKYQRDL---REALAQKE 294

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           ++ E+    +      +R    S  +L + +  +      ++   +E        L+   
Sbjct: 295 DMEERITTLEKRYLAAQRE-ATSIHDLNDKLENELANKESLHRQCEEKARHLQELLELAE 353

Query: 264 RDLEQNQRTF-------ADEMSKLTILEKTREQ 289
           + L+Q  R         A+   ++  L K +E+
Sbjct: 354 QKLQQTMRKAETLPEVEAELAQRIAALTKAKER 386


>gi|183985668|gb|AAI66177.1| LOC100158525 protein [Xenopus (Silurana) tropicalis]
          Length = 1601

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 67/210 (31%), Gaps = 7/210 (3%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            L  E +     I   +  I  L         EK  L+    +        E + + L   
Sbjct: 979  LQLEKVTAEAKIKKMEEDILVLEDQNSKFLKEKKLLEERIAESTSQLAEEEEKAKNLAKL 1038

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              K     +      +    ++ +      R +     DL+++ + L+A +   +  L  
Sbjct: 1039 KNKQEMMITD-LEERLKKEEKTRQELEKAKRKLDGETTDLQDQIAELQAQIEELKLQLAK 1097

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             +   +      ++   Q+    K   EL+  I E +  L       ++A  +  +  +E
Sbjct: 1098 KEEELQAALARGDEEVLQKNNTLKVVRELQAQIAELQEDLESEKASRNKAEKQKRDLSEE 1157

Query: 262  ISR---DLEQNQRTFADEMSKLTILEKTRE 288
            +     +LE    T A +    T  E+   
Sbjct: 1158 LEALKTELEDTLDTTAAQQELRTKREQEVA 1187


>gi|21325768|dbj|BAC00389.1| Membrane-fusion protein [Corynebacterium glutamicum ATCC 13032]
          Length = 659

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 90/295 (30%), Gaps = 26/295 (8%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            +         LK    +     I+  ++    LNN    L          LLD      
Sbjct: 213 LDSTMVAQSDALKAAREQADAAEIERLRADFGLLNNDRSNLNDVIG-----LLDERESLA 267

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
           S  S++     +    ++     ++  +  +   + +K+S   +   ++ +  T ++   
Sbjct: 268 SAESELAQARAAGDLEAVAAAEAKVAGLEQS---IASKTSTWPSQDQTYLQSYTALEEAE 324

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            + A +   L   ERI   S  ++   +   +  +   +    +A L            L
Sbjct: 325 RRVASTTEALEIAERIYIDSLGKVDSELAAAQRAVAEAHSAQQDAALGLETAQLSTQHQL 384

Query: 267 EQNQRTFADEM-----------SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           E         +              + L       T+ SP +G +   Q+       Q +
Sbjct: 385 EAQSSAIDAALGLASVDNEAATRSTSQLRMDINNTTVRSPYSGIVSSVQAAQG----QPA 440

Query: 316 QPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
              +  V       I A V   +I +V  G  + V F        K+F   + K+
Sbjct: 441 AGALLSVADDSELKITANVKEAEISNVTIG--SRVTFTT-PSTGTKEFAGRVSKV 492


>gi|47230389|emb|CAF99582.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1905

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 12/206 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                 + ++   ++     +      L+ +  +    ++ F++ +  + D       T  
Sbjct: 1478 RANRALTVRLEDVQRNLNRLSVTHKELEEMLQEERSQKEQFKNMKNNIEDERRLLDRTVE 1537

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYL----NRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
            K+       V  S    L     I L    NR +L     LL+      +K     K+L 
Sbjct: 1538 KLQREMNDIVDASQSSTLELQEQIDLYKEKNRRELTELQRLLKERGQELEKQQLTSKSLQ 1597

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            E+  V+   L Q+E  + +   EL++   E+   +  +  L         N L+++  + 
Sbjct: 1598 EEGTVTLTRLGQEEEELSQQEAELQQCRRERDQAVLRVKAL--------ENKLQDVEGEA 1649

Query: 267  EQNQRTFADEMSKLTILEKTREQKTI 292
            E       D   ++ ++E    Q  +
Sbjct: 1650 ETKAGAKDDRARQIKLMEDRIAQLEL 1675



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 48/110 (43%), Gaps = 4/110 (3%)

Query: 169  TRMRSIYLNRLDLENKSSLLRALLSSHQKD---LTMMKNLFEKNAVSQNDLNQQERIVYK 225
             +++ +     ++E K S L+  +   + D   +T +K L ++   S  +  +    + K
Sbjct: 1187 AQVKDLQEQNAEMEKKMSELKIQIQKKEADRKTVTGLKELQQELERSTQECKRLREKLAK 1246

Query: 226  STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
            +  EL+  + E   +     +   E   +  + L E+  +L+  +++ AD
Sbjct: 1247 TETELQTTVEELFQVKIEREQYQTEIR-DLQDQLSEMHDELDTAKKSVAD 1295


>gi|325203636|gb|ADY99089.1| chromosome segregation protein SMC [Neisseria meningitidis
           M01-240355]
          Length = 1161

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 25/197 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKFLTAQLNRQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHRQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEK 285
                A+   +L  LE+
Sbjct: 359 WAMQVAEHEERLPELEE 375


>gi|325293742|ref|YP_004279606.1| HlyD family secretion protein [Agrobacterium sp. H13-3]
 gi|325061595|gb|ADY65286.1| HlyD family secretion protein [Agrobacterium sp. H13-3]
          Length = 397

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 77/251 (30%), Gaps = 23/251 (9%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHE- 236
           R++     ++L +     QK          + AV+Q+     E    K+    + +    
Sbjct: 89  RVEANAVLAVLSSDSLLLQKSQLEANRAKAQAAVAQSKAQVLEAEANKADALRQRDRAAK 148

Query: 237 --QKNMLRHINELYDEANLEFANYLKEISRDLEQN-QRTFADEMSKLTILEKTREQKTIL 293
             Q            EA  + A    + ++      +       +++  +     +  + 
Sbjct: 149 LGQSGSGSVSETEKTEAAAQVAQARLDAAKQTVSAGEADIKVVDAQIDDINLKLTRTGVK 208

Query: 294 SPIAGTIVYNQSFSSSNYAQ-QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           +P+ G IV  ++      A     PL  I+    +  + A ++   IQ VK G  A +  
Sbjct: 209 TPVTG-IVSAKNAKVGAIASGAGNPLFTIIKDGAIELV-ADLSETDIQRVKAGQKAFLTV 266

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                   KK +  +  + P +              V+L     A        R+G  A 
Sbjct: 267 AG----GAKKIEGKVRLVSPTVDPATRLGSVH----VVLPTDSPA--------RSGMYAS 310

Query: 413 VLFTAKNTTLA 423
                K T   
Sbjct: 311 AEIIVKETNAL 321



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 74/214 (34%), Gaps = 18/214 (8%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS 102
           + ++G I   D +  ++    G+ I +  V+ G ++     L       ++D + L+K  
Sbjct: 56  IIATGTIRPVDEI-YVQPLVDGLSIDELNVDIGDRVEANAVLAVL----SSDSLLLQKSQ 110

Query: 103 IKNLRCHIDT-----EKSALDFLNNKYDVLEKAFES----REEQLLDFLGKYHSTCSKVF 153
           ++  R          +   L+   NK D L +   +    +         +     ++V 
Sbjct: 111 LEANRAKAQAAVAQSKAQVLEAEANKADALRQRDRAAKLGQSGSGSVSETEKTEAAAQVA 170

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
              + +  +++      ++ +     D+     L R  + +    +   KN  +  A++ 
Sbjct: 171 QARLDAAKQTVSAGEADIKVVDAQIDDIN--LKLTRTGVKTPVTGIVSAKN-AKVGAIAS 227

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
              N    I+    +EL  ++ E         + 
Sbjct: 228 GAGNPLFTIIKDGAIELVADLSETDIQRVKAGQK 261


>gi|313159655|gb|EFR59013.1| efflux transporter, RND family, MFP subunit [Alistipes sp. HGB5]
          Length = 330

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 52/143 (36%), Gaps = 17/143 (11%)

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           +Q ++  A    +  ++   ++   + SPI G +        S     +QP++ I+    
Sbjct: 118 QQIEQAKAQLDVQREVVANLKKNIEVHSPITGVVTARNY--ESGDLFAAQPILHIM-QID 174

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              + A ++ +  ++VK G    ++   +           +  I P +            
Sbjct: 175 PLKVVANISEQYFRNVKVGMPVDLKVDIFPGETFP---GTVSLIYPALDPATRT------ 225

Query: 387 YEVILKITDLAFSDNNIELRNGF 409
           ++V +K+ +   +     LR G 
Sbjct: 226 FKVEVKVPNAKRT-----LRPGM 243



 Score = 36.9 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 23/69 (33%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  VE G  + QG  ++T +  + T  +   K    +    +   ++           
Sbjct: 64  IDRILVEVGDPVRQGQLIVTLDPTQYTQQLVQLKTVEDDYNRLLPVYEAGGISAQQIEQA 123

Query: 127 LEKAFESRE 135
             +    RE
Sbjct: 124 KAQLDVQRE 132


>gi|307209018|gb|EFN86218.1| Cytospin-A [Harpegnathos saltator]
          Length = 1447

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 75/214 (35%), Gaps = 19/214 (8%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSA-----LDFLNNKYDVLEKAFESREEQLL------ 139
               L++  +  I+ L      E  +     LD    + D LE    + +EQL       
Sbjct: 315 RLATLLENARAKIEELEQSRQLENKSEADELLDAARREKDTLETQAAALQEQLARSHCDH 374

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ--- 196
           D L   +S   + +    ++   ++     R+  +   RL +  +  L+R  L+  Q   
Sbjct: 375 DRLRDQYSQLQEEYKVARNNAKSAIDDLEYRLNQLKDERLSVSTELQLVRDSLAELQAQC 434

Query: 197 -KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            + L   + L    + +Q      ER +       R+ I E +     +      AN   
Sbjct: 435 QRHLEDKRELKTALSEAQTRQYDLERALADERKLRRDEITEWEQFQTDLLMTVRVAN--- 491

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            ++  E   +LE+       +  KL  LE   ++
Sbjct: 492 -DFKTEAQSELERVVMENKAQRDKLRALEAQLDK 524


>gi|213404596|ref|XP_002173070.1| mitotic cohesin complex subunit Psm1 [Schizosaccharomyces japonicus
           yFS275]
 gi|212001117|gb|EEB06777.1| mitotic cohesin complex subunit Psm1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 1232

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 71/221 (32%), Gaps = 20/221 (9%)

Query: 85  LTFEDIETTDLIDLKKVSI--KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL 142
           +  E++E   +     V++    LR     E+  L+ L          F  ++E+  + L
Sbjct: 328 IKLEEVEKDHVAQQNTVALLKDQLRALQMAEEQFLNELKESEKSRGIQFTPQQEETYNVL 387

Query: 143 GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
            +     + +    + ++ R +K    ++ SI  N   +++K   L   ++S Q +  ++
Sbjct: 388 RQEVDAKNSLLLPEVEAMNRRIKKDSQQLVSISDNIKGIQSKLQGLDEQINSLQAEKELL 447

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
                               V      L     E       + +L  E        L+E 
Sbjct: 448 TT-----------------DVNDKLSALESKKAEHSQKRTKLVQLTQE-EAILNEKLQEC 489

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYN 303
            R L +      +   +    +     K I   + G +V  
Sbjct: 490 LRKLLEVNAMSHESRRETKKRDALFSLKRIYPEVKGRVVDL 530


>gi|95928541|ref|ZP_01311288.1| secretion protein HlyD [Desulfuromonas acetoxidans DSM 684]
 gi|95931180|ref|ZP_01313903.1| secretion protein HlyD [Desulfuromonas acetoxidans DSM 684]
 gi|95132786|gb|EAT14462.1| secretion protein HlyD [Desulfuromonas acetoxidans DSM 684]
 gi|95135331|gb|EAT16983.1| secretion protein HlyD [Desulfuromonas acetoxidans DSM 684]
          Length = 383

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 40/117 (34%), Gaps = 2/117 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V  G ++  G  L   + ++  + +  +  ++K     +   ++  D+   + 
Sbjct: 73  GRVIRLDVHVGERVKAGQVLGEMDPVDLDERLRAQDATLKRANAQLKEAQARKDYAQTQA 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              E+  + R         K       V   G+++    L        ++   R +L
Sbjct: 133 LRYEQLLKVRSSSEEVVATKQQDLL--VAKAGLTAAREELSRVRAEREALEAQRNNL 187



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/179 (10%), Positives = 62/179 (34%), Gaps = 20/179 (11%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD--------- 265
            L  Q+  + ++  +L+E   + +        L  E  L+  +  +E+            
Sbjct: 103 RLRAQDATLKRANAQLKE--AQARKDYAQTQALRYEQLLKVRSSSEEVVATKQQDLLVAK 160

Query: 266 --LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
             L   +   +   ++   LE  R   ++++P+   +V  +           Q +++++ 
Sbjct: 161 AGLTAAREELSRVRAEREALEAQRNNLSLIAPVDSLVVS-RDADPGTTVVAGQSVVELI- 218

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK-AIIEKIDPIISQQDNNL 381
                ++  +    + + +  G +A +        +  + +   + +++P+        
Sbjct: 219 DPSTLWVNVRFDQIRARGLAAGLSAQITL----RSQAGELQAGRVLRVEPLADAVTEET 273


>gi|329910033|ref|ZP_08275210.1| efflux transporter, RND family, MFP subunit [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327546295|gb|EGF31322.1| efflux transporter, RND family, MFP subunit [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 362

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 54/179 (30%), Gaps = 15/179 (8%)

Query: 245 NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
                +     A  + +     +  +   A   + L + +       +++P +G I   +
Sbjct: 124 ARTLQDTGALSAQQINQYLTTEQTAKARVASAKATLEVQQVRLRHTRLVAPDSGII-SAR 182

Query: 305 SFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFK 364
           + +  +       L +++        RA+V   ++  ++ G   +V              
Sbjct: 183 TATVGSVVPAGSELFRMI-RQGRLEWRAEVIAAELGRIRPGMGVSV-----VAANGSTLT 236

Query: 365 AIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLA 423
             +  I P +  Q            ++ +   A S      R G  A   F   N+T  
Sbjct: 237 GKVRMIAPTVDLQTRT--------ALVYVDLQAASGKTAPARAGMFARGDFALGNSTAL 287


>gi|227536646|ref|ZP_03966695.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227243447|gb|EEI93462.1| RND family efflux transporter MFP subunit [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 400

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 65/174 (37%), Gaps = 2/174 (1%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            VEI+    GI+    V+ G ++ +G  L    D    + ++  K +++  +  +  E +
Sbjct: 82  NVEIRPQIEGILDHIYVDEGQKVSKGQLLFKINDRPYQEQLNQAKANLQVAQASL--ENA 139

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            L+       V  K     + Q             +     I +   ++   L R  S  
Sbjct: 140 ELEVEKKNRLVNNKVLTDFQLQTAVSARNAAKASVQQAKSAIEAAKINVGYTLIRASSDG 199

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
                 + + SL+  + +     L+ +++L    ++S+ND  Q +      ++E
Sbjct: 200 YIGRLQKKQGSLITPMDAQALTGLSDIRDLHVYFSLSENDFVQFKNNAKGKSIE 253


>gi|254283201|ref|ZP_04958169.1| efflux transporter, RND family, MFP subunit [gamma proteobacterium
           NOR51-B]
 gi|219679404|gb|EED35753.1| efflux transporter, RND family, MFP subunit [gamma proteobacterium
           NOR51-B]
          Length = 349

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 81/256 (31%), Gaps = 26/256 (10%)

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQERIVYKS 226
           + R           +  +   RA     Q    + + L      V++ DL      +  S
Sbjct: 31  VARGAEQIERVFSAQADTQPNRAAEIKAQTAGEITEVLVTSGQKVARGDLL-----LRLS 85

Query: 227 TLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
             +    + E K ++    ++  EA    +    + +  LEQ++       + L  + K 
Sbjct: 86  PGDRDAKLREAKALVAQ-RKVELEAAERLSTRGYQAAVQLEQSRAALEQAQALLVRIRKD 144

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            +   +L+P  G +      +  +Y     P + +V  +    + A      +  +  G 
Sbjct: 145 IDYTELLAPWEGIVDRVHVDA-GDYLGIGDPALTLV-DNNPLSVVAHFPQDAVNALAVGQ 202

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELR 406
           TAT+          +     + ++ P              + V ++++      N   + 
Sbjct: 203 TATIAL-----RSGEVRTGQVVEVAPRSKAATRT------FRVEVQMS------NPEGMA 245

Query: 407 NGFPAEVLFTAKNTTL 422
            G  A++       T 
Sbjct: 246 AGISADMRIVTGTVTA 261



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 33/90 (36%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           EIK+  +G I +  V +G ++ +G  LL     +    +   K  +   +  ++  +   
Sbjct: 55  EIKAQTAGEITEVLVTSGQKVARGDLLLRLSPGDRDAKLREAKALVAQRKVELEAAERLS 114

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                    LE++  + E+     +     
Sbjct: 115 TRGYQAAVQLEQSRAALEQAQALLVRIRKD 144


>gi|242025142|ref|XP_002432985.1| myosin-18A, putative [Pediculus humanus corporis]
 gi|212518494|gb|EEB20247.1| myosin-18A, putative [Pediculus humanus corporis]
          Length = 1601

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 77/225 (34%), Gaps = 15/225 (6%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE-----------Q 137
            D E  +     +  IK L   +++E      L  +   LE+     EE            
Sbjct: 1224 DDELDESRSNTQKKIKVLEAQLESEHEERTLLVREKHELERRLADAEERGRHNKAADEDA 1283

Query: 138  LLDFLGKYHSTCSKVFNYGI-SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
            LL        T + + +  I     +        +R++     D+E   +       S  
Sbjct: 1284 LLRARRDLKKTKALLRDAQIMLERAKQDSPSKAALRALKNQLEDVELARASAVKAKQSLD 1343

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             +L  +  L E+   ++ D   + +   + T  LR  + E +  L  + + Y +   + +
Sbjct: 1344 SELNEVNGLLEEAIRAKGDAENRCQAALRETNALRMQVEENEEELAELLKKYRQIVQQLS 1403

Query: 257  NYL---KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                  +E +  L + +   A    +L  L    E   +L P++G
Sbjct: 1404 AEQLANQETAGALAEAEVERASLKEQLAELSARLEANAVLDPLSG 1448



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/224 (9%), Positives = 68/224 (30%), Gaps = 5/224 (2%)

Query: 72   VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            V+    +      +  E  +     D  +  +  +   +  E++A      + +      
Sbjct: 888  VQELETVKSLLEKVESERNQLKLENDKLETKLSEMTMDLSEERTAGALQAERLEAETAER 947

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
               E++L     +  +         +   Y   +  +  +     +  D    ++L +  
Sbjct: 948  VRLEQELSQIQNEKKNLQQASERLEMELFYA--RADVNGLSESEGDLEDGGGDAALYKNK 1005

Query: 192  LSSHQKDLTMMKN-LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
                 ++L   +  L +++      L   ++ + K   +  E + EQ+ +         +
Sbjct: 1006 CERTMRELEFTRRRLQQQHEDDLEQLVGLKKQLEKKLADAYEEVEEQRQVAGQWKRKVQK 1065

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               E  +    +      ++    ++  +    E    Q+ + S
Sbjct: 1066 LQSEMNDLRLLLEEQ--SSRNNLLEKKQRKFDSEIQLLQEELRS 1107



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 79/220 (35%), Gaps = 11/220 (5%)

Query: 82   TPLLTFEDIETTDLIDLKKVS-----IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
               L  E+  + + +  KK       I+ L+  + +EK+  + L+ + ++      S E+
Sbjct: 1072 DLRLLLEEQSSRNNLLEKKQRKFDSEIQLLQEELRSEKNQKERLSREKEMAYAEKYSMEQ 1131

Query: 137  QLLDFLGKYHSTCSKVFNYGIS-SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
             L  F  +      K+ +       +         +  +   + DLE K       L   
Sbjct: 1132 NLSSFRLELELKDEKLLSLTQELEEFSRGGGSEQEITQLRKAKHDLEIKLKEQEEELDEL 1191

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
               ++M++    +  +S   L ++  R + +   EL E+    +  ++ +    +  + E
Sbjct: 1192 AGQVSMLEGNKLRLEMSLESLRKEHRREIAQRDDELDESRSNTQKKIKVLEAQLESEHEE 1251

Query: 255  FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                ++E      + +R  AD   +    +   E   + +
Sbjct: 1252 RTLLVREKH----ELERRLADAEERGRHNKAADEDALLRA 1287



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 23/221 (10%)

Query: 84   LLTFEDIETTDLIDLKKVSI-----KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            L     ++    +D +   +     + +R   D E      L  + + L    E  EE+L
Sbjct: 1330 LARASAVKAKQSLDSELNEVNGLLEEAIRAKGDAENRCQAALR-ETNALRMQVEENEEEL 1388

Query: 139  LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
             + L KY     ++    +++   +       +    + R  L+ + + L A L ++   
Sbjct: 1389 AELLKKYRQIVQQLSAEQLANQETA-----GALAEAEVERASLKEQLAELSARLEANA-V 1442

Query: 199  LTMMKNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL---- 253
            L  +  L +K   +   +L  +  +   +   L   I   K  +  +NE   +A      
Sbjct: 1443 LDPLSGLAQKKLEIRIKELESRLDLEQTTRGRLEVQITRLKENVERLNEDCIQARTKEQG 1502

Query: 254  ------EFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                  +    L+E   +L ++Q    + + K   LEK  E
Sbjct: 1503 ATDTARKLQRTLRETKEELAKHQAKEQEALHKRKELEKRLE 1543



 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 61/185 (32%), Gaps = 15/185 (8%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
              L   E        ++++ S+K     +     A   L+    + +K  E R ++L   
Sbjct: 1405 EQLANQETAGALAEAEVERASLKEQLAELSARLEANAVLDPLSGLAQKKLEIRIKELESR 1464

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            L    +T  +     I+ +  +++                 + +  L+  L   +++L  
Sbjct: 1465 LDLEQTTRGR-LEVQITRLKENVERLNEDCIQARTKEQGATDTARKLQRTLRETKEEL-- 1521

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
                      +++   +QE +  +  LE R    EQ+      +     A     +    
Sbjct: 1522 ----------AKHQAKEQEALHKRKELEKRLETAEQEAFTARTD--LRLAVKRIEDLQSA 1569

Query: 262  ISRDL 266
            IS ++
Sbjct: 1570 ISGEI 1574


>gi|168042792|ref|XP_001773871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674858|gb|EDQ61361.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 763

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 80/222 (36%), Gaps = 11/222 (4%)

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTE--KSALDFLNNKYDVLEKAFESREEQLLD 140
            L+    ++  + ++ K   I  ++     E  + +L+ L ++ + L+    + +E + +
Sbjct: 228 TLMRSMVVKYDEQMEEKIKEIVEMKQRSLAEENQKSLEILRDREEFLQGQLRAAKESVQN 287

Query: 141 FLGKYHSTCSKVFNYGISSV------YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
               +    S++F     S          L +    +       L LE +   LR+ L +
Sbjct: 288 MQRLHEYGQSQLFELRAQSEEISANKQSELNLLTDEVDRAQARLLSLEREKEQLRSQLQA 347

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
                + ++   ++ A S   L        K   EL   +H  +  L    E +     +
Sbjct: 348 VHSQDSQLQERLDEEANS--SLEASLTAKEKIISELHHELHTMETSLGSEREQHIAEVKK 405

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
               L E    LE+ QR  ++       +E  R+Q  IL  +
Sbjct: 406 LKALLSEKDTALEELQREISE-RPTAKQVEDLRKQVKILQAV 446


>gi|161869474|ref|YP_001598641.1| hypothetical protein NMCC_0486 [Neisseria meningitidis 053442]
 gi|161595027|gb|ABX72687.1| conserved hypothetical protein [Neisseria meningitidis 053442]
 gi|319409923|emb|CBY90248.1| SMC protein [Neisseria meningitidis WUE 2594]
          Length = 1161

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 72/200 (36%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNRQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 ATQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +++    EQ+ +   + E   +A         E   +L +
Sbjct: 316 ---------RIERDKQAAQAQMQRIHQEQQQIRVQLEENELQAE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|222053316|ref|YP_002535678.1| efflux transporter, RND family, MFP subunit [Geobacter sp. FRC-32]
 gi|221562605|gb|ACM18577.1| efflux transporter, RND family, MFP subunit [Geobacter sp. FRC-32]
          Length = 459

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 67/178 (37%), Gaps = 16/178 (8%)

Query: 207 EKNAVS--QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           E +AVS  Q+ L      V  +    R     +K  +    E+          +L+E + 
Sbjct: 184 ESSAVSGDQSRLAAARSRVQTAEASYRREAELEKKGISAKKEVQA-----AQQFLREATA 238

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
           +LE  Q T       +     +  + T+ +P++G +   ++ S   Y     PL +IV  
Sbjct: 239 ELESLQATLRG----VGAHNGSGGRYTVKAPVSGVVTQ-RTVSLDRYVDSQTPLFEIV-D 292

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           +   +    +   ++  VK G +  V     +     +F+  I  I P+I  Q    +
Sbjct: 293 TSSMWAEVALPEAELGTVKAGASVVVTMDGLSGR---EFRGSISHIAPVIDPQTRTAK 347


>gi|48146571|emb|CAG33508.1| C6orf18 [Homo sapiens]
          Length = 782

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 79/204 (38%), Gaps = 5/204 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + L+   ++  R  +D E      L  +     +     E Q L  + +      +   
Sbjct: 500 DVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQ 559

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAVS 212
             ++S+   L++     +        L  + +  + L   +  +K   +   L E+ + +
Sbjct: 560 ESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDT 619

Query: 213 QNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +  LN+  R   K+ + LR+      ++K   + +  L +EA  E    L    ++LE++
Sbjct: 620 ERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERD 679

Query: 270 QRTFADEMSKLTILEKTREQKTIL 293
           +      + +  +L + ++Q+ + 
Sbjct: 680 KNLMLATLQQEGLLSRYKQQRLLT 703



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E ++  L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 85  QALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEA- 143

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+   SQ +L + +R+  +    L +   E  + L    E  
Sbjct: 144 -EGLRAALAGAEVVRKNLEEG--SQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGL 200

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 201 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 243



 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 69/218 (31%), Gaps = 10/218 (4%)

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V    ++ +    +      +       +     L      EK+           L
Sbjct: 91  AEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAAL 150

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSV----YRSLKMKLTRMRSIYLNRLDLEN 183
             A   R + L +   +      ++    +SS+      +L    ++   +  +   LE 
Sbjct: 151 AGAEVVR-KNLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLET 209

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +     L+  Q++  +++    K   +Q DL  Q  +V      + E +  +  +   
Sbjct: 210 RRAGEAKELAEAQREAELLRKQLSK---TQEDLEAQVTLVENLRKYVGEQVPSE--VHSQ 264

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             EL  +  LE   +L+E    L          +  LT
Sbjct: 265 TWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLT 302


>gi|71650534|ref|XP_813963.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70878895|gb|EAN92112.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 1104

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 66/215 (30%), Gaps = 10/215 (4%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L    + E   L +  +  +  L    +     L  +       E A      +  +   
Sbjct: 459 LTVRHNAELRSLREENQQLMDQLTSAREAHAEELQQVRKNQRKSESAVTRDAAKEFETTL 518

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRS-----IYLNRLDLENKSSLLRALLSSHQKD 198
           +  +   +     +      L  +L               ++LE   +  R      QK 
Sbjct: 519 RRMNERHEETRRALELEKGQLVRQLREAEQRCEDKQRRLEIELEKSEAARRDGERIQQKH 578

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
               + L E     Q  + + +R    S  +L     + +  L  +   ++ A     + 
Sbjct: 579 DEKERALAE----LQESVEELKRK-DCSVADLSSRNRKLQQELEQLRHNHETATRAKDSE 633

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           L+E+  DL + +R       +LT   + +E+  + 
Sbjct: 634 LQELRHDLAETRRRVVGLQDELTAARRMQEEVEVR 668



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 70/206 (33%), Gaps = 10/206 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL----EKAFESREEQLLDFLGKYH 146
           E   +       ++ L+     E ++L     +   L    E        QL     +  
Sbjct: 235 EFRAIEGQWTSRLERLQLEHINETASLRQEIERERQLVAHGESQLSETRNQLAKLTSQLE 294

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM-KNL 205
             C +      S    +   ++ +     L R   E+K S  +  +   Q+ L    + L
Sbjct: 295 ELCRQREGDAHSRGTETFMGEIHQKAIERLQRAFEEDKQSTKQWFVEEQQRILNSHERTL 354

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            E     +  + + E  +  S  +LRE   E +     +     + +   A+ L+     
Sbjct: 355 HEIQDSHRAQVRRLEETLDASNRQLREMEIEVQQYKTKLAGAALKPSSASADELR----- 409

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT 291
           L +  RT   ++++    ++  E+++
Sbjct: 410 LREELRTIRKQLNEAVDAKQRLERRS 435


>gi|330807758|ref|YP_004352220.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327375866|gb|AEA67216.1| putative lipoprotein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 366

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/128 (12%), Positives = 45/128 (35%), Gaps = 6/128 (4%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFL 120
            G + +  VE G ++    PL   +  +    ++  +  +     ++     E+     L
Sbjct: 66  GGKVSRRLVEEGQRVKANQPLAELDPEDVRLQLEASRAQVAAAEANLNLVRAERDRYKTL 125

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSK---VFNYGISSVYRSLKMKLTRMRSIYLN 177
             +  V    +++ E        +     ++     N    SV R+ +  +   RS+ + 
Sbjct: 126 MERQMVSRSQYDNAENLYRSGTARLKQIKAEFDVANNQASYSVLRAPQDGVVARRSVEVG 185

Query: 178 RLDLENKS 185
           ++    ++
Sbjct: 186 QVVSAGQT 193



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 63/231 (27%), Gaps = 25/231 (10%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN----LEFANY 258
           + L E+    + +    E       L+L  +  +      ++N +  E +    L     
Sbjct: 71  RRLVEEGQRVKANQPLAELDPEDVRLQLEASRAQVAAAEANLNLVRAERDRYKTLMERQM 130

Query: 259 LKEISRDLEQNQ-----RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +     D  +N             ++  +         + +P  G +V  +S        
Sbjct: 131 VSRSQYDNAENLYRSGTARLKQIKAEFDVANNQASYSVLRAPQDG-VVARRSVEVGQVVS 189

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q +  +        +   +  +     K G   +V      D R   F   I ++ P 
Sbjct: 190 AGQTVFTLA-TDGEREVLISLPEQGFGRFKIGQPVSVELWSQPDQR---FSGRIRELSPA 245

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
              +         +   +     AF+  ++    G  A V     +     
Sbjct: 246 ADPKSRT------FAARV-----AFTAGSVPAELGQSARVFIQTADKVPLS 285


>gi|331223781|ref|XP_003324563.1| tip elongation aberrant protein 1 [Puccinia graminis f. sp. tritici
            CRL 75-36-700-3]
 gi|309303553|gb|EFP80144.1| tip elongation aberrant protein 1 [Puccinia graminis f. sp. tritici
            CRL 75-36-700-3]
          Length = 1530

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 73/213 (34%), Gaps = 9/213 (4%)

Query: 86   TFEDIETT-DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
               D+E     + + K + +     + +E      L             R EQL     +
Sbjct: 828  RINDLEHKLSELVVSKSASERQVAQLTSELEQERILREVSQENSNKSHDRSEQLQALHSQ 887

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR---LDLENKSSLLRALLSSHQKDLTM 201
                  ++ N        S             +R    +LEN    L +    ++K L  
Sbjct: 888  LVIDYEELLNKTRGMDVTSTDSAQQYQSLQTSHRAILAELENSKQKLESTQLVNEKYLVT 947

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +++L +    S++ +++ +    ++  +L       +++ R ++    E +   A     
Sbjct: 948  LQHLQKSMDASRSKVDEVQHSWEQAKSDLEAQKTLAQDLSRELDSKLLELDHSRAKI--- 1004

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               ++EQ  RT  DE + L  L +    + I +
Sbjct: 1005 --EEMEQALRTVQDENAALKTLNEDGISQLINA 1035


>gi|302926236|ref|XP_003054254.1| hypothetical protein NECHADRAFT_74786 [Nectria haematococca mpVI
           77-13-4]
 gi|256735195|gb|EEU48541.1| hypothetical protein NECHADRAFT_74786 [Nectria haematococca mpVI
           77-13-4]
          Length = 1130

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 79/214 (36%), Gaps = 14/214 (6%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           + +E    ++     +K      + E + L  L  + D+L     +R        G + S
Sbjct: 764 DALEQKYQVENGLGGLKMDLDRAEEEIALLRDLLKEKDILIPESFARASGSSTSSGSFAS 823

Query: 148 TCSKVFNYGISSVYRSLKMK----LTRMRSI----------YLNRLDLENKSSLLRALLS 193
               V +  +   Y+ L+      L R++ +           L    LE   S+  +   
Sbjct: 824 PNGPVTSESLEKAYKELQAAYADSLERIKQLEHDTANDDKTQLAMERLERTLSIAVSERD 883

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
           + + ++  +KN +++ +VS++   + ER +     E    + E  + +RH      +   
Sbjct: 884 AAKHEVDALKNQYDELSVSESKTLESERALADDLNESARRVEELASQVRHQLSSNAQLRE 943

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
             AN +     D + N    AD   +L  +E+  
Sbjct: 944 RLANAVTRGENDRKSNSDRIADLQVRLRTMEEQL 977


>gi|254427942|ref|ZP_05041649.1| efflux transporter, RND family, MFP subunit, putative [Alcanivorax
           sp. DG881]
 gi|196194111|gb|EDX89070.1| efflux transporter, RND family, MFP subunit, putative [Alcanivorax
           sp. DG881]
          Length = 542

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 18/148 (12%)

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           A  +  +    K  E  T+ +P  G I    + +         P+ +I   +   ++   
Sbjct: 166 ASLIRSIERQRKPLETWTVTAPHDGVIRSLNARA-GMTLSAGAPVAEIQSLN-PVWVEIA 223

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKF-KAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           V  +Q+  V  G    V         +    +  +  I P++ Q            V ++
Sbjct: 224 VPERQLGQVSSGNAVDVTV----QGVKPALREGQVADILPLVDQSSRT--------VPVR 271

Query: 393 ITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +T    S++  +LR G  A+V    + T
Sbjct: 272 VT---LSNDEGDLRPGMSAQVRIHGEAT 296


>gi|57339718|gb|AAW49846.1| hypothetical protein FTT0727 [synthetic construct]
          Length = 261

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 58/160 (36%), Gaps = 11/160 (6%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC--- 108
              ++  I S  SG + +  V  G  + +G  L   +  +   L+D  K      +    
Sbjct: 63  VSTDIRYISSQESGRLLRLDVSQGESVKEGQSLFLIDSSKNQILLDSNKFLYSASQAVSE 122

Query: 109 -------HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                   +  EK+A+D  N K ++   + E + +QLL           +          
Sbjct: 123 NMSKGKRQLYIEKTAIDISNAKANLAVASKEYQRQQLLFKDDSTSQKEFEQAQSKYIQAN 182

Query: 162 RSLKM-KLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             ++  ++ ++ +    R DL N    +   ++S+ K L 
Sbjct: 183 NQVEALEVMQIINNLPAREDLRNAVDFMSKFINSNSKYLQ 222


>gi|66808035|ref|XP_637740.1| myosin II heavy chain [Dictyostelium discoideum AX4]
 gi|134047850|sp|P08799|MYS2_DICDI RecName: Full=Myosin-2 heavy chain; AltName: Full=Myosin II heavy
            chain
 gi|60466139|gb|EAL64202.1| myosin II heavy chain [Dictyostelium discoideum AX4]
          Length = 2116

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 72/208 (34%), Gaps = 5/208 (2%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY-- 145
                  + I  K   I +LR  +D E  +    +       K F   E ++ +   +   
Sbjct: 1527 SGTVNVEFIRKKDAEIDDLRARLDRETESRIKSDEDKKNTRKQFADLEAKVEEAQREVVT 1586

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS--SHQKDLTMMK 203
                 K     I  +   L  +      I  ++  LE   +  RA     S   D  + K
Sbjct: 1587 IDRLKKKLESDIIDLSTQLDTETKSRIKIEKSKKKLEQTLAERRAAEEGSSKAADEEIRK 1646

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             ++++    +  L+ +   +  S  +++  + E   +   + +    A  +     + + 
Sbjct: 1647 QVWQEVDELRAQLDSERAALNASEKKIKSLVAEVDEVKEQLEDEIL-AKDKLVKAKRALE 1705

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
             +LE+ +    +E    + LE ++ + T
Sbjct: 1706 VELEEVRDQLEEEEDSRSELEDSKRRLT 1733



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 7/192 (3%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD------FLG 143
             +T       +  I  LR  ++ E++     +     LE   ++   Q+ D       L 
Sbjct: 1835 TQTEIGAAKLEDQIDELRSKLEQEQAKATQADKSKKTLEGEIDNLRAQIEDEGKIKMRLE 1894

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K              +V  +   K    +S  L  L+LE+    L+  + + +       
Sbjct: 1895 KEKRALEGELEELRETVEEAEDSKSEAEQSKRLVELELEDARRNLQKEIDAKEIAEDAKS 1954

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            NL  +   ++  L ++      S    +    E   +   ++    +A  +     K+I 
Sbjct: 1955 NLQREIVEAKGRLEEESIARTNSDRSRKRLEAEIDALTAQVDA-EQKAKNQQIKENKKIE 2013

Query: 264  RDLEQNQRTFAD 275
             +L++ ++ F +
Sbjct: 2014 TELKEYRKKFGE 2025



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 69/190 (36%), Gaps = 7/190 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST--CSKVFNYGIS 158
              +  LR  +D+E++AL+    K   L    +  +EQL D +          +     + 
Sbjct: 1650 QEVDELRAQLDSERAALNASEKKIKSLVAEVDEVKEQLEDEILAKDKLVKAKRALEVELE 1709

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM----KNLFEKNAVSQN 214
             V   L+ +      +  ++  L  +   ++    +  +  T +    K L +     + 
Sbjct: 1710 EVRDQLEEEEDSRSELEDSKRRLTTEVEDIKKKYDAEVEQNTKLDEAKKKLTDDVDTLKK 1769

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             L  +++ + +S    +    E ++ L  ++    +         K+  +DL+  +    
Sbjct: 1770 QLEDEKKKLNESERAKKRLESENEDFLAKLDAEV-KNRSRAEKDRKKYEKDLKDTKYKLN 1828

Query: 275  DEMSKLTILE 284
            DE +  T  E
Sbjct: 1829 DEAATKTQTE 1838



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 81/224 (36%), Gaps = 19/224 (8%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            ++ +       + S  NL+  ++ E+ A   L  K   LE   +   EQL +   +  S 
Sbjct: 1250 NVNSDSTNKHLETSFNNLKLELEAEQKAKQALEKKRLGLESELKHVNEQLEEEKKQKESN 1309

Query: 149  CSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS----SHQKDLTMM 202
              +       +S +   ++ ++   +++   +   E++   ++   +    S  K +  +
Sbjct: 1310 EKRKVDLEKEVSELKDQIEEEVASKKAVTEAKNKKESELDEIKRQYADVVSSRDKSVEQL 1369

Query: 203  KNLFEKN-------AVSQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEAN 252
            K L  KN         ++  L++ ER   K+  +L E   N+ E+        +   +A 
Sbjct: 1370 KTLQAKNEELRNTAEEAEGQLDRAERSKKKAEFDLEEAVKNLEEETAKKVKAEKAMKKAE 1429

Query: 253  LEFANYLKEISRDLE---QNQRTFADEMSKLTILEKTREQKTIL 293
             ++ +   E+        +          +L+ L    E+    
Sbjct: 1430 TDYRSTKSELDDAKNVSSEQYVQIKRLNEELSELRSVLEEADER 1473



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 16/194 (8%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            ++  + + K L    +   + LD         EK  +  E+ L D   K +   +     
Sbjct: 1778 LNESERAKKRLESENEDFLAKLDAEVKNRSRAEKDRKKYEKDLKDTKYKLNDEAATKTQT 1837

Query: 156  GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             I +    L+ ++  +RS        + K++       + + ++  ++   E     +  
Sbjct: 1838 EIGA--AKLEDQIDELRSKLEQE---QAKATQADKSKKTLEGEIDNLRAQIEDEGKIKMR 1892

Query: 216  LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
            L +++R +     ELRE + E ++      +      LE           LE  +R    
Sbjct: 1893 LEKEKRALEGELEELRETVEEAEDSKSEAEQSKRLVELE-----------LEDARRNLQK 1941

Query: 276  EMSKLTILEKTREQ 289
            E+    I E  +  
Sbjct: 1942 EIDAKEIAEDAKSN 1955


>gi|53725075|ref|YP_102615.1| multidrug resistance protein [Burkholderia mallei ATCC 23344]
 gi|67641983|ref|ZP_00440747.1| HlyD family secretion protein [Burkholderia mallei GB8 horse 4]
 gi|121598881|ref|YP_992740.1| putative multidrug resistance protein [Burkholderia mallei SAVP1]
 gi|124386173|ref|YP_001026466.1| putative multidrug resistance protein [Burkholderia mallei NCTC
           10229]
 gi|126451414|ref|YP_001080257.1| putative multidrug resistance protein [Burkholderia mallei NCTC
           10247]
 gi|167001866|ref|ZP_02267656.1| putative multidrug resistance protein [Burkholderia mallei PRL-20]
 gi|167738958|ref|ZP_02411732.1| putative multidrug resistance protein [Burkholderia pseudomallei
           14]
 gi|237811930|ref|YP_002896381.1| HlyD family secretion protein [Burkholderia pseudomallei MSHR346]
 gi|254177581|ref|ZP_04884236.1| putative multidrug resistance protein [Burkholderia mallei ATCC
           10399]
 gi|254199551|ref|ZP_04905917.1| putative multidrug resistance protein [Burkholderia mallei FMH]
 gi|254358729|ref|ZP_04975002.1| putative multidrug resistance protein [Burkholderia mallei
           2002721280]
 gi|52428498|gb|AAU49091.1| multidrug resistance protein, putative [Burkholderia mallei ATCC
           23344]
 gi|121227691|gb|ABM50209.1| putative multidrug resistance protein [Burkholderia mallei SAVP1]
 gi|124294193|gb|ABN03462.1| putative multidrug resistance protein [Burkholderia mallei NCTC
           10229]
 gi|126244284|gb|ABO07377.1| putative multidrug resistance protein [Burkholderia mallei NCTC
           10247]
 gi|147749147|gb|EDK56221.1| putative multidrug resistance protein [Burkholderia mallei FMH]
 gi|148027856|gb|EDK85877.1| putative multidrug resistance protein [Burkholderia mallei
           2002721280]
 gi|160698620|gb|EDP88590.1| putative multidrug resistance protein [Burkholderia mallei ATCC
           10399]
 gi|237505779|gb|ACQ98097.1| HlyD family secretion protein [Burkholderia pseudomallei MSHR346]
 gi|238523022|gb|EEP86463.1| HlyD family secretion protein [Burkholderia mallei GB8 horse 4]
 gi|243062367|gb|EES44553.1| putative multidrug resistance protein [Burkholderia mallei PRL-20]
          Length = 395

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/191 (9%), Positives = 60/191 (31%), Gaps = 3/191 (1%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  + ++ ++ ++G   W          +       + N + I    SG +
Sbjct: 49  ERKRPGKKPLVVLAIIVVLLLVGAFVW-WFATRNQVSTDDAY--TDGNAITIAPKVSGYV 105

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               +++   + +G  LL  +  +    +D  +  +   +  +D  +  LD  + ++   
Sbjct: 106 VALAIDDNVYVHRGDLLLVIDQRDYQAQVDAARAQLGLAQAQLDAAQVQLDIAHVQFPAQ 165

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +  +++ E       +  +   +       +  +         R      +      + 
Sbjct: 166 YRQAQAQIEAAQASFRQALAAYERQHAVDARATSQQAIDVADAQRLTADANVATARAQAR 225

Query: 188 LRALLSSHQKD 198
             +L+    + 
Sbjct: 226 TASLVPQQIRQ 236


>gi|332998161|gb|EGK17765.1| multidrug resistance protein mdtN [Shigella flexneri VA-6]
          Length = 312

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 4/134 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              + +++    SG I +  V +   + QG  L   +       +   + S+  L   I 
Sbjct: 44  ASADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIM 103

Query: 112 TEKSALDFLNNKYDVLEKAFE---SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             + ++D      D +    E   +  +Q  D L +      + F      V R+   + 
Sbjct: 104 LTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSA-EDVDRARTAQR 162

Query: 169 TRMRSIYLNRLDLE 182
                I L +L LE
Sbjct: 163 AAEADIALTKLHLE 176



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 71/204 (34%), Gaps = 8/204 (3%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE--LRENIHEQ 237
           +   K   L   +     +  + K      A+ +  +  Q  +  +      +   + + 
Sbjct: 67  NQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQIMLTQRSVDAQQFGADSVNATVEKA 126

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +   +   +                  D+++ +       + + + +   E  T+ +P  
Sbjct: 127 RAAAKQATDTLRRTEPLLKEGFVSA-EDVDRARTAQRAAEADIALTKLHLEMTTVRAPFD 185

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYAD 357
           G I+  ++ S   +A   +P+  ++  ++  Y+ A      +++++ G  AT+R      
Sbjct: 186 GRIISLKT-SVGQFASAMRPIFTLI-DTRHWYVIANFRETDLKNIRSGTPATIRLMS--- 240

Query: 358 IREKKFKAIIEKIDPIISQQDNNL 381
              K F+  ++ I   +   D  L
Sbjct: 241 DSGKTFEGKVDSIGYGVLPDDGGL 264


>gi|331663569|ref|ZP_08364479.1| multidrug resistance protein MdtA (Multidrug transportermdtA)
           [Escherichia coli TA143]
 gi|331059368|gb|EGI31345.1| multidrug resistance protein MdtA (Multidrug transportermdtA)
           [Escherichia coli TA143]
          Length = 371

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 113 AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLIALHFQEGQQVKAGDLLAEIDPS 170

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 171 QFKVALAQAQGQLAKDKATLANARRDL----ARYQQLVKTNLVSRQELDAQQALVSETEG 226

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 227 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 259



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 63/204 (30%), Gaps = 19/204 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN--ELYDEANLEFANYLKEISRDLE 267
            +++ D +Q +  + ++  +L ++     N  R +   +   + NL     L      + 
Sbjct: 163 LLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLVKTNLVSRQELDAQQALVS 222

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIV--- 322
           + + T   + + +   +   +   I +P+ G +   +     N         ++ I    
Sbjct: 223 ETEGTIKADEASVASAQLQLDWSRITAPVDGRV-GLKQVDVGNQISSGDTTGIVVITQTH 281

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTA--TVRFPHYADIREKKF-KAIIEKIDPIISQQDN 379
           P          +    I  V +   A   +    +     KK  +  +  +D  I     
Sbjct: 282 PID--LVFT--LPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTG 337

Query: 380 NLQTQEYYEVILKITDLAFSDNNI 403
            ++     +      D A   N  
Sbjct: 338 TIKV----KARFNNQDDALFPNQF 357


>gi|324499471|gb|ADY39774.1| Myosin-9 [Ascaris suum]
          Length = 2074

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 79/215 (36%), Gaps = 12/215 (5%)

Query: 80   QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE--- 136
            +G  L+      + +L + K+         + +E+   D++     + ++  ES+++   
Sbjct: 1193 KGQILVKQLKNASAELQEAKEDIENERSLRMKSERGKRDYMEELEALKQELLESQDKTQA 1252

Query: 137  --QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD-LENKSSLLRALLS 193
              ++     K     +  F   +     S ++K+  ++  Y  ++D L ++   L+ L  
Sbjct: 1253 NVEMRAEREKQFQLLNMGFKKELEESKTSSELKINELKQKYAKQIDALNDQIDQLKRLKH 1312

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA-N 252
              +K     K L EK    +N L +Q     K   E +  + E   +         E   
Sbjct: 1313 QSEK----SKELIEKELSEKNMLLEQ-CQGAKVDAERKRKVAESGLLEWQTKANDVELER 1367

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
               AN L +   ++ Q   +   +   +  L+K  
Sbjct: 1368 ASLANALSKAQVEIGQLHSSLESKEDDIASLQKKV 1402



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 72/228 (31%), Gaps = 15/228 (6%)

Query: 77   QILQGTPLLTFEDIE-----TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            Q+  G    + E  E         +      +      +  EKS    L  K   LE   
Sbjct: 1378 QVEIGQLHSSLESKEDDIASLQKKVVDLSDQLTESAEQLGVEKSQKGVLQEKVRDLENEL 1437

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR----LDLENKSSL 187
            E+  E   D  G       ++ N     +    K     ++    +R     DLE     
Sbjct: 1438 EAEREVREDDEGTRQKMEKEIVNLKQQLMDLKSKGSEEALKQAEESRKKLCKDLEACQKQ 1497

Query: 188  LRALLSSHQKDLTMMKNLFEKNAVSQND---LNQQERIVYKSTLELRENIHEQKNMLRHI 244
            L    +  Q+     K L ++N  ++ +   L  Q R + K   +  + + E++      
Sbjct: 1498 LEEAQADRQRSEKAKKKLMQENEDARVELDNLRAQYREMEKKQRKFDQQLAEERGKTATA 1557

Query: 245  NELYDEANLEFANYLKEI---SRDLEQNQRTFADEMSKLTILEKTREQ 289
                D+   +      ++   ++++++ +    +       L+   + 
Sbjct: 1558 IAERDQLAQDVRERGSKVLIMAKEMDEMRGCLEELERLKRSLQLELDN 1605



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 26/244 (10%), Positives = 76/244 (31%), Gaps = 36/244 (14%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            +  +++         +   +     +  E+        + D L +    R  ++L    +
Sbjct: 1524 VELDNL--RAQYREMEKKQRKFDQQLAEERGKTATAIAERDQLAQDVRERGSKVLIMAKE 1581

Query: 145  YHSTCS--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
                    +       S+   L   +T       +  +LE +  LL A ++  ++++  +
Sbjct: 1582 MDEMRGCLEELERLKRSLQLELDNLMTTKDDAGRSAHELEREKRLLEAEVAKMKEEILEL 1641

Query: 203  KN----------------------LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM 240
            ++                      L +  AV + +  ++ R   +   EL + +  ++  
Sbjct: 1642 EDSYQSSEDARLRLEVNLQTVKNDLEKAVAVKEQENEEKRRNAQRRVRELEDELDAERRT 1701

Query: 241  LRHINELYDEANLEF----------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
                 +   +   E                ++SR L +  ++  D   +L  +   +E  
Sbjct: 1702 RASAVQQKKKMEGELNKASADLDALTRQRDDLSRQLRKVTQSLKDLQQELEEMRTEKETT 1761

Query: 291  TILS 294
             + +
Sbjct: 1762 ILRA 1765



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 79/223 (35%), Gaps = 10/223 (4%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
                +     L+  +   + + +   + S K L   ++  +  L+         EKA + 
Sbjct: 1455 EKEIVNLKQQLMDLKSKGSEEALKQAEESRKKLCKDLEACQKQLEEAQADRQRSEKAKKK 1514

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
              ++  D   +  +  ++     +    R    +L   R        +  +  L + +  
Sbjct: 1515 LMQENEDARVELDNLRAQY--REMEKKQRKFDQQLAEERGKTAT--AIAERDQLAQDVRE 1570

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               K L M K + E     +  L + ER+     LEL   +  + +  R  +EL  E  L
Sbjct: 1571 RGSKVLIMAKEMDEM----RGCLEELERLKRSLQLELDNLMTTKDDAGRSAHELEREKRL 1626

Query: 254  EFANY--LKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              A    +KE   +LE + ++  D   +L +  +T +     +
Sbjct: 1627 LEAEVAKMKEEILELEDSYQSSEDARLRLEVNLQTVKNDLEKA 1669



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 16/203 (7%)

Query: 87   FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
             E      L+  K+  +  LR  +  ++  L+ +  + + L       +EQL   +    
Sbjct: 933  LEVTNNEALLAAKESELHELREVLQRKEDDLNDITERVEQLNNERAQLQEQLQ--VESVE 990

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
                +     +      L+ +L           +   KSS  R  L    + L       
Sbjct: 991  KLEMEDMKERLVQRVEELEDQLKNANRQLEEDEEKLEKSSDARRKLQESSQHL------- 1043

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
                  +  L  +ER   K+ L+      + K  L+  +EL  ++N +           +
Sbjct: 1044 ------EEQLEAEERAHQKALLDKTSAEQKLKAALKECDEL-GQSNQKLGKEKAICEERI 1096

Query: 267  EQNQRTFADEMSKLTILEKTREQ 289
             +     A+E  K   L K + +
Sbjct: 1097 AELSANLANEEEKYRQLTKVKTR 1119



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 21/197 (10%), Positives = 71/197 (36%), Gaps = 5/197 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            ++D     + S ++L   ++ E+ A      +  +L+K    ++ +            ++
Sbjct: 1029 SSDARRKLQESSQHLEEQLEAEERAH-----QKALLDKTSAEQKLKAALKECDELGQSNQ 1083

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +     +      + +       L    + + + L+S ++ L   +    ++  
Sbjct: 1084 KLGKEKAICEERIAELSANLANEEEKYRQLTKVKTRMDSQLASLEEQLDGERISRSQSEA 1143

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +  +  ++R +  +  EL++ +++   +L    E   +A  ++     +    ++Q + 
Sbjct: 1144 EKRQIAAEQREMKDAMEELQKKLYDLNTILVKREEELFQALAKYDEEQAKGQILVKQLKN 1203

Query: 272  TFADEMSKLTILEKTRE 288
              A+       +E  R 
Sbjct: 1204 ASAELQEAKEDIENERS 1220


>gi|320167226|gb|EFW44125.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1013

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 9/201 (4%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +   T D +   +  +K     I    +  D L      L++A +    +L +   K + 
Sbjct: 550 DASTTADELAETQRKLKEAESKIADASTVADELAESQRRLKEAEDKAAAELAETQRKLNE 609

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
             SK+ +    +            R +         + +  +  L+  +  L+      +
Sbjct: 610 AESKIADATTVA-----DELAETQRKLKEAEDKAAAELAETQRKLNEAESRLSDASTTAD 664

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
           + A SQ  L + E  +  ++  + + + E +  L+       +A+ E  +   + + +L 
Sbjct: 665 ELAESQRKLKEAESKIADAST-VADELAESQRKLKEAESKIADASTEAED---KAAAELA 720

Query: 268 QNQRTFADEMSKLTILEKTRE 288
           + QR   +  SK+     T +
Sbjct: 721 ETQRKLNEAESKIADASTTAD 741



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 64/201 (31%), Gaps = 9/201 (4%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +     D +   +  +K        E +      N+ +       +  ++L +   K   
Sbjct: 574 DASTVADELAESQRRLKEAEDKAAAELAETQRKLNEAESKIADATTVADELAETQRKLKE 633

Query: 148 TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              K     ++   R L    +R+        +L      L+   S      T+   L E
Sbjct: 634 AEDKA-AAELAETQRKLNEAESRLSDASTTADELAESQRKLKEAESKIADASTVADELAE 692

Query: 208 KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
               SQ  L + E  +  ++ E  +    +   L       +EA  + A+     + +L 
Sbjct: 693 ----SQRKLKEAESKIADASTEAEDKAAAE---LAETQRKLNEAESKIADA-STTADELA 744

Query: 268 QNQRTFADEMSKLTILEKTRE 288
           + QR   +  SK+     T +
Sbjct: 745 ETQRKLKEAESKIADASTTAD 765



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 67/215 (31%), Gaps = 5/215 (2%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            Q+   + L+  ++            + K        +++     +      E A   R+
Sbjct: 505 QQVKTESELVDAQNKRMEAEDKAAGAATKLAESQCRLKEAESKLADASTTADELAETQRK 564

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +  +      ST +         +  +       +        + E+K +    +    
Sbjct: 565 LKEAESKIADASTVADELAESQRRLKEAEDKAAAELAETQRKLNEAESKIADATTVADEL 624

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
            +     + L E    +  +L + +R + ++   L  +     + L        EA  + 
Sbjct: 625 AE---TQRKLKEAEDKAAAELAETQRKLNEAESRL-SDASTTADELAESQRKLKEAESKI 680

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
           A+    ++ +L ++QR   +  SK+       E K
Sbjct: 681 ADA-STVADELAESQRKLKEAESKIADASTEAEDK 714


>gi|294624210|ref|ZP_06702929.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601490|gb|EFF45508.1| ABC transporter permease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 423

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 50/370 (13%), Positives = 111/370 (30%), Gaps = 65/370 (17%)

Query: 15  ASLKRMTL--LSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV 72
           A  +R     L+ + ++  I W++      S                +S  +  ++   V
Sbjct: 19  APWRRWLWPGLAAVAVLAGIGWAVTAWSAGS----------------RSFDASRVRIATV 62

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G  +               D+    +V   N           +       DV+++  E
Sbjct: 63  TQGDLV--------------RDIAADGRVIAANSTVLYAISAGTVTLSVVAGDVVKQGQE 108

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
                  +   K     + +      S   +L   L R  +  L        +   R   
Sbjct: 109 LARIDSPELRSKLAQEQATLAGLEAESSRAALDATLARANASKL--------TDQARIDK 160

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN 252
            +  +DL   +  ++  AV Q +L + +  + K+ ++L+    +                
Sbjct: 161 QAAARDLERYQRGYDGGAVPQVELAKAQDTLKKTDIDLQHAQRDAA------------LK 208

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA 312
            + A+      R L   QR    E+ +        +  T+ SP  G +   Q+   +  A
Sbjct: 209 SQGADLDSRNKRLLADRQRAVVAEVQR------QVDALTLRSPFDGQVGQVQAVQHTQVA 262

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
             + P++ +V       +  KV     + +  G  A +          + F   +  + P
Sbjct: 263 -ANAPILGVV-DLSKFEVEIKVPESFARDLAIGMPAQL-----TSGSGEPFAGAVSAVSP 315

Query: 373 IISQQDNNLQ 382
            +   +   +
Sbjct: 316 EVVNGEVTAR 325


>gi|281352762|gb|EFB28346.1| hypothetical protein PANDA_003881 [Ailuropoda melanoleuca]
          Length = 858

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 76/205 (37%), Gaps = 5/205 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              + L+   ++  R  +D E      +  +     +     E Q L  + +      + 
Sbjct: 587 ATDVSLELEQLREERNRLDAEVQLSAHIIQQEVGRAREQGDAERQRLSEVAQQLEQELQR 646

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNA 210
               +++V   L+      R        L  + +  + +   +  +K   +   L E+  
Sbjct: 647 TQESLANVGLQLEAARQGQRESTQEAASLRQELTQQQEIYGQALQEKVAEVETRLREQLL 706

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNML---RHINELYDEANLEFANYLKEISRDLE 267
            ++  LN+  R   K+ + LR+   +        + +  L DEA  E    L +  ++LE
Sbjct: 707 ETERRLNEARREHGKAVVSLRQMQRKATREKERNQELRRLQDEARKEEGLRLTQRLQELE 766

Query: 268 QNQRTFADEMSKLTILEKTREQKTI 292
           +++      + +  +L + ++Q+ +
Sbjct: 767 RDKNFMLATLQQEGLLSRYKQQRLL 791



 Score = 39.6 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 65/207 (31%), Gaps = 7/207 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
               + +     +++V             + L   +    +         EQL +   + 
Sbjct: 545 QLPSLSSRVSYAVRRVHTIQGLMARKLALAQLRQESCPPPLPATDVSLELEQLREERNRL 604

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT----M 201
            +      +     V R+ +      + +      LE +    +  L++    L      
Sbjct: 605 DAEVQLSAHIIQQEVGRAREQGDAERQRLSEVAQQLEQELQRTQESLANVGLQLEAARQG 664

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +   ++ A  + +L QQ+ I  ++   L+E + E +  LR      +    E      +
Sbjct: 665 QRESTQEAASLRQELTQQQEIYGQA---LQEKVAEVETRLREQLLETERRLNEARREHGK 721

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTRE 288
               L Q QR    E  +   L + ++
Sbjct: 722 AVVSLRQMQRKATREKERNQELRRLQD 748


>gi|124021979|ref|YP_001016286.1| membrane-fusion protein [Prochlorococcus marinus str. MIT 9303]
 gi|123962265|gb|ABM77021.1| Membrane-fusion protein [Prochlorococcus marinus str. MIT 9303]
          Length = 375

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 51/155 (32%), Gaps = 11/155 (7%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEI------SRDLEQNQRTFADEMSKLTILEKT 286
           +  + +  L        +  L +  Y   +      + D ++ +  +     K+   E T
Sbjct: 103 DQAQIRAELADFKAQEQKNKLNWQRYEFLVPQGAASALDRDEYKAQYIASREKVKATEAT 162

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                + SPI+G +         +  +   P  K++  +   + R +V       +K G 
Sbjct: 163 LAYSNLRSPISGIVADVDV-KVGDVIRSGDPFTKLI-RNNWLFARVEVPATFSDRIKIGL 220

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
              +     +D+        I  + P +++    L
Sbjct: 221 PVFLSKTGSSDVMA---TGEINSVSPTVNRTTQGL 252



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 37/106 (34%), Gaps = 4/106 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I + +++ G Q+  G  L+  +  +    +   K   +  + +        +FL  +
Sbjct: 79  SGRIIELKIDQGDQVQPGQMLVVLDQAQIRAELADFKAQEQKNKLN----WQRYEFLVPQ 134

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                   +  + Q +    K  +T + +    + S    +   + 
Sbjct: 135 GAASALDRDEYKAQYIASREKVKATEATLAYSNLRSPISGIVADVD 180


>gi|116062143|dbj|BAF34702.1| fast skeletal myosin heavy chain isoform mMYH-2 [Oryzias latipes]
          Length = 1935

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 84/211 (39%), Gaps = 12/211 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            E+ + ++ K  S++  +  +  E   L    +  N+    L+K   + ++ L ++  KY 
Sbjct: 1405 ESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYE 1464

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             + +++   G     RSL  +L +M++ Y   LD   +   ++    + Q++++ +    
Sbjct: 1465 ESQAEL--EGAQKEARSLSTELFKMKNSYEEALD---QLETMKRENKNLQQEISDLTEQI 1519

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             +   S ++L + ++ V     E++  + E +  L H         LE      EI R L
Sbjct: 1520 GETGKSIHELEKAKKSVETEKSEIQTALEEAEGTLEHEEAKILRVQLELNQVKGEIDRKL 1579

Query: 267  EQNQRTFADEM---SKLTILEKTREQKTILS 294
             +             ++    ++     + S
Sbjct: 1580 AEKDEEMEQIKRNSQRVIESMQSTLDAEVRS 1610



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 77/229 (33%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1209 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEGVAKSKGNLEKMCRTLEDQLSELKAKN 1266

Query: 146  HSTCSKV--FNYGISSVY-------RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                 ++   N   + +        R L+ K   +  +   +     +   L+  +    
Sbjct: 1267 DENIRQLNDLNAQRARLQTENGEFSRQLEEKEALVSQLTRGKQAFTQQIEELKRQVEEEV 1326

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1327 KAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRT 1386

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   + +  +     + E+      + G +     
Sbjct: 1387 EELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQR--LQGEVEDLMI 1433



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K   I  L   I+ E+S    L  K   L+   
Sbjct: 1059 EGDLKLAQESIMDLENDKQQSDEKIKKKDFEISQLLSKIEDEQSLGAQLQKKIKELQARI 1118

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1119 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATSAQIEMNKKREA---- 1172

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1173 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1227

Query: 252  NLEFANYLKEIS------RDLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +    +        +LE+  RT  D++S+L        ++
Sbjct: 1228 KMEIDDLSSNMEGVAKSKGNLEKMCRTLEDQLSELKAKNDENIRQ 1272



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 70/209 (33%), Gaps = 14/209 (6%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            L  + ++    +D      +N         T+ + +     K        E  ++ L   
Sbjct: 1733 LESDLVQVQGEVDDAIQEARNAEEKAKKAITDAAMMAEELKKEQDTSSHLERMKKNLEVT 1792

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            +        +  N  +    + L+   +R+R +     ++E++       +   +K    
Sbjct: 1793 VKDLQHRLDEAENLAMKGGKKQLQKLESRVRELES---EVESEQRRGADAIKGVRKYERR 1849

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +K L  +    + ++N+ + +V K  L+++    + +      N             L++
Sbjct: 1850 VKELTYQTEEDKKNVNRLQDLVDKLQLKVKGYKRQAEEAEEQANTHMSR--------LRK 1901

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQK 290
            +  +LE+ Q       S++  L       
Sbjct: 1902 VQHELEEAQERADIAESQVNKLRAKSRDT 1930


>gi|30268331|emb|CAD89954.1| hypothetical protein [Homo sapiens]
          Length = 1331

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 68/209 (32%), Gaps = 5/209 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +D   +   +      K     + + ++ +  L  +    E+A    +++  +   + 
Sbjct: 1075 ELDDTRASR--EEILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEI 1132

Query: 146  HSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             ++  K  +       +   +      +     N   + ++       +     DL + +
Sbjct: 1133 ANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLER 1192

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEI 262
            +  +KN  ++  L +Q + +     E+   +  + K  +  +     +   +  N  KE 
Sbjct: 1193 SHAQKNENARQQLERQNKELKVKLQEMEGTVKSKYKASITALEAKIAQLEEQLDNETKER 1252

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +Q +RT       L  ++  R    
Sbjct: 1253 QAACKQVRRTEKKLKDVLLQVDDERRNAE 1281



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 66/197 (33%), Gaps = 8/197 (4%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            S+  L       +  ++ +  + + LE   ++ E+  L       +  ++          
Sbjct: 941  SVHELEKSKRALEQQVEEMKTQLEELEGELQATEDAKLRLEVNLQAMKAQFERDLQGRDE 1000

Query: 162  RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-------EKNAVSQN 214
            +S + K   +R +     +LE++       +++ +K    +K+L        +    +  
Sbjct: 1001 QSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEAIK 1060

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             L + +  +     EL +    ++ +L    E   +     A  + ++  +L   +R   
Sbjct: 1061 QLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMI-QLQEELAAAERAKR 1119

Query: 275  DEMSKLTILEKTREQKT 291
                +   L       +
Sbjct: 1120 QAQQERDELADEIANSS 1136



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 75/235 (31%), Gaps = 29/235 (12%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D ++ +        ++ +   ++ E+            LE   +  E  +          
Sbjct: 999  DEQSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEA 1058

Query: 149  CSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--- 203
              ++      +    R L         I     + E K   + A +   Q++L   +   
Sbjct: 1059 IKQLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMIQLQEELAAAERAK 1118

Query: 204  --------NLFE-------KNAVSQNDLNQQERIVYKSTLELRENIH-------EQKNML 241
                     L +       K A++  +  + E  + +   EL E            K   
Sbjct: 1119 RQAQQERDELADEIANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKAN 1178

Query: 242  RHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              I+++  + NLE ++  K     + LE+  +    ++ ++    K++ + +I +
Sbjct: 1179 LQIDQINTDLNLERSHAQKNENARQQLERQNKELKVKLQEMEGTVKSKYKASITA 1233



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 72/206 (34%), Gaps = 12/206 (5%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV--FN 154
            D  +   +       +   AL+    +   LE+  +    ++ D +         V    
Sbjct: 887  DRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSVHELE 946

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
                ++ + ++   T++  +       E+    L   L + +      ++L  ++  S+ 
Sbjct: 947  KSKRALEQQVEEMKTQLEELEGELQATEDAKLRLEVNLQAMKAQFE--RDLQGRDEQSEE 1004

Query: 215  DLNQQERIVYKSTLEL-----RENIHEQKNMLRHINELYDEANLEFANY-LKEISRDLEQ 268
               Q  R V +   EL     + ++         ++    EA+++ AN    E  + L +
Sbjct: 1005 KKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEAIKQLRK 1064

Query: 269  NQRTFADEMSKLTILEKTREQKTILS 294
             Q    D M +L   +    ++ IL+
Sbjct: 1065 LQAQMKDCMRELD--DTRASREEILA 1088



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 28/222 (12%), Positives = 66/222 (29%), Gaps = 30/222 (13%)

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + LR  +  +K  L+ + +  +   +  E R + L     K      ++        
Sbjct: 761 AEAEELRARLTAKKQELEEICHDLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEE 820

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN-------LFEKNAVS- 212
               K++L ++ +    +   E    LL  L    Q    + K        L E+  +S 
Sbjct: 821 SARQKLQLEKVTTEAKLKKLEEELDDLLVDLDHQRQSACNLEKKQKKFDQLLAEEKTISA 880

Query: 213 -----QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--------- 258
                ++    + R      L L   + E       +  L  +   E  +          
Sbjct: 881 KYAGERDRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGK 940

Query: 259 --------LKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                    + + + +E+ +    +   +L   E  + +  +
Sbjct: 941 SVHELEKSKRALEQQVEEMKTQLEELEGELQATEDAKLRLEV 982


>gi|71279929|ref|YP_268844.1| RND family efflux transporter MFP subunit [Colwellia
           psychrerythraea 34H]
 gi|71145669|gb|AAZ26142.1| efflux transporter, RND family, MFP subunit [Colwellia
           psychrerythraea 34H]
          Length = 418

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/337 (11%), Positives = 88/337 (26%), Gaps = 82/337 (24%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P  ISV  +G ++ +  +  + +   G +++  V+ G  + +G  ++   +     L +
Sbjct: 56  GPFSISVRGAGLLVPD-KIKWLAASVDGHVERVVVKPGKSVKKGELIIELSNPRLKQLQE 114

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             K  ++ +       ++                                          
Sbjct: 115 ETKWELEAIIAESKASQA------------------------------------------ 132

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
                     L +   +   +L+ ++    L A                +  AVS+ D  
Sbjct: 133 ----EQKSGLLFQKARMLDAKLNYQSSKLKLDAQRELFNN---------KTGAVSKIDYE 179

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           + +    +     +       +M  +I    +  N       K + R             
Sbjct: 180 KTKLETQQFNQRWKIQEEVLVSMTDNIVVQDNAHNSRINKMRKTLER------------- 226

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
                 E+  +   I + +   +                 L K+           +V   
Sbjct: 227 -----AEQQVKDLMIYASLDSVVQDVSV-EPGQRVNMGSNLAKLA-QQDSLIAELQVAEL 279

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
            I  V  G   T+      D R      I+ ++DP +
Sbjct: 280 LIGEVSIGQLVTI------DTRNNTVSGIVARVDPAV 310


>gi|197100263|ref|NP_001127346.1| liprin-alpha-2 [Pongo abelii]
 gi|55728290|emb|CAH90890.1| hypothetical protein [Pongo abelii]
          Length = 1186

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 24/226 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L +  K   + +R  +      +  L  +     +   +  EQ +    K  S+    
Sbjct: 104 KSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGST 163

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF------ 206
            +  +  +    K+   R+ +  ++  D  ++   L+ LL     ++  MK         
Sbjct: 164 ESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQNYEMAQMKERLAALSSR 223

Query: 207 -----EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL-------------Y 248
                ++   ++ DL + E +  K   ++RE + ++++M   I  L              
Sbjct: 224 VGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSI 283

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + N +  N L      L Q +        +L + E+  +Q    +
Sbjct: 284 HDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKA 329



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 80/219 (36%), Gaps = 19/219 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E  +L++ +   +  ++  +    S +  +  + +   K     EE    +        
Sbjct: 197 VELQELLEKQNYEMAQMKERLAALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAM 256

Query: 150 SKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++       I+++ +          SI+     LEN+ +   A+L   ++     + L E
Sbjct: 257 AQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEK---NRQLQE 313

Query: 208 KNAVSQNDLNQQER---IVYKSTLELRENIHE----------QKNMLRHINELYDEANLE 254
           +  +++  L Q  R    + +   EL + I             +  +RH+    +E N E
Sbjct: 314 RLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEEKNQE 373

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                ++  +  E++ +  +D + +L      R Q  + 
Sbjct: 374 L-QRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLK 411


>gi|42558935|sp|Q8HZ59|CCHCR_GORGO RecName: Full=Coiled-coil alpha-helical rod protein 1; AltName:
           Full=Alpha-helical coiled-coil rod protein
 gi|23296128|gb|AAN12280.1| HCR [Gorilla gorilla]
          Length = 782

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 79/204 (38%), Gaps = 5/204 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + L+   ++  R  +D E      L  +     +     E Q L  + +      +   
Sbjct: 500 DVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQ 559

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAVS 212
             ++S+   L++     +        L  + +  + L   +  +K   +   L E+ + +
Sbjct: 560 ESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDT 619

Query: 213 QNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +  LN+  R   K+ + LR+      ++K   + +  L +EA  E    L    ++LE++
Sbjct: 620 ERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERD 679

Query: 270 QRTFADEMSKLTILEKTREQKTIL 293
           +      + +  +L + ++Q+ + 
Sbjct: 680 KNLMLATLQQEGLLSRYKQQRLLT 703



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 62/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E +   L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 85  QALSQQAEVIARQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEA- 143

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+   SQ +L + +R+  +    L +   E  + L    E  
Sbjct: 144 -EGLRAALAGAEVVRKNLEEG--SQRELEEVQRLHQEQLSSLTQAHKEALSSLTSKAEGL 200

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 201 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 243


>gi|299531192|ref|ZP_07044603.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           S44]
 gi|298720775|gb|EFI61721.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           S44]
          Length = 435

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 59/183 (32%), Gaps = 16/183 (8%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +        +++  +GI++K   + GS +  G  L   ++      +   + ++   
Sbjct: 75  PGRLEPSRIAQ-VRARAAGIVQKRLFQEGSDVKAGQALFQIDNTPYKANLQSAQATLAQA 133

Query: 107 RCHIDTEKSAL-------DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + ++    +         +         + A  + +  L        +  +   N G +S
Sbjct: 134 KANLAQASATARRYKPLVEANAISKQEYDTAIANEKAALAQVAAGKAAVTNANVNLGYAS 193

Query: 160 VYRSLKMKLTR--------MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V   +  ++ R        +      +L    + + L   L+    D+  M+       +
Sbjct: 194 VTAPISGRIGRALVTEGALVGQGEATQLATIQQVNPLYVNLTQSSSDIMRMREALSSGKL 253

Query: 212 SQN 214
           ++ 
Sbjct: 254 AKV 256


>gi|295676314|ref|YP_003604838.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1002]
 gi|295436157|gb|ADG15327.1| secretion protein HlyD family protein [Burkholderia sp. CCGE1002]
          Length = 377

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 89/302 (29%), Gaps = 27/302 (8%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
            R   + +  I+  + W +L   +     + +   +  VV + +  SG +    V N  +
Sbjct: 26  GRAVKVVVCLIVLSLIWYLLA--DRFTPYTQQARIQAYVVPVAAEVSGRVTHVFVHNNQE 83

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           +  G  L   +        D  +  +++ R  +    + ++           A E +  Q
Sbjct: 84  VNAGDVLFEVDSEPYRIAADRARADLESTRRQVGASTAGIESALAAL-RAAVANEVKARQ 142

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
             D L + +                   + L R+           ++    RA +   ++
Sbjct: 143 DSDRLERLY-------------REDEGTVSLRRLEVARATHEQARSQVDGARAEVERARE 189

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN--IHEQKNMLRHINELYDEANLEF 255
                +    +   + + L + E  +  + +  R +  + + +  +       +      
Sbjct: 190 QQGGHEAQNAQLRSAASALEKAELDLANARIRARSSGVVTDLRTEVGQFAAAGNPVMTLI 249

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A     IS D+ +N        +++ I               G +   +  S        
Sbjct: 250 AIRDVWISADMTENNLGHLKPGTRVEIALDVLP---------GEVFDGRVRSVGYGVSVG 300

Query: 316 QP 317
           Q 
Sbjct: 301 QT 302


>gi|239817238|ref|YP_002946148.1| hypothetical protein Vapar_4269 [Variovorax paradoxus S110]
 gi|239803815|gb|ACS20882.1| conserved hypothetical protein [Variovorax paradoxus S110]
          Length = 433

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/370 (11%), Positives = 120/370 (32%), Gaps = 28/370 (7%)

Query: 23  LSIIGIIGLITWSILLPI------EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGS 76
           L+   ++  + W ++  +        +  +    + +  V  I SP +G++ +  V    
Sbjct: 43  LAAYALLAFVLWLMVATLVQPLLSSQATRA----VLQAPVGLITSPINGVVSQMVVHARD 98

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++  GT + T  +   +  I      +  LR    + +S L  L N+Y    +   S  +
Sbjct: 99  KVEPGTIVATVRNPTVSQEI------LTTLRSQRLSLQSQLAQLGNQYKSDNQEMRSVGQ 152

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
           +         +   + +         +  +   +   +  N+  LE + ++   ++++  
Sbjct: 153 EAGVHREASLAQAWEAWQIARRQRDVAHSVVEEQENKVRTNQALLE-QGAISEQVMNASM 211

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             L   +      AV++     Q + V  +       +    + L        EA     
Sbjct: 212 AQLNTAR---ANAAVAEQSFAGQAQTVASAGQ--GAFVGTGGSNLFQTLASRREALRNSV 266

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
              ++ +  + +  +   D   +     +      I +  AG +    +     Y     
Sbjct: 267 GRAQQDATAIFKQLKEVRDLEEEERRRVEKLSFYEIKASQAGQVHSVLA-PEGAYVTAGA 325

Query: 317 PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ 376
            L+++        + A    +  + +  G    V+         +   A +E++ P+ S 
Sbjct: 326 SLVRVT-DCSRLGVVAVFPARVAKRLGIGSVLDVKL----AESARPVPARVEQLLPVASD 380

Query: 377 QDNNLQTQEY 386
              +  +  +
Sbjct: 381 ALQSTYSVPF 390


>gi|197337260|ref|YP_002158571.1| acriflavin resistance periplasmic protein [Vibrio fischeri MJ11]
 gi|197314512|gb|ACH63961.1| acriflavin resistance periplasmic protein [Vibrio fischeri MJ11]
          Length = 384

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 8/200 (4%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G   +  +V  I     G +K    ++G  + +G  L   +       ++  K S++  R
Sbjct: 56  GRTSSVSSVEII-PRVGGELKAIHFKDGDFVKKGDLLYEIDPRVFHAAVNSAKASLEKAR 114

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
             +    S  +    +   L K      +Q    +  Y S  + +     +     L ++
Sbjct: 115 ATLKMTTSNAE----RAKQLIKDKSISVQQYDTAIANYESAKADISEKQATLKSAQLDLE 170

Query: 168 LTRMRSIYLNRLDLENKS--SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
            +R+ + +  RL          + ALL         + +L + N ++  D N  E++  +
Sbjct: 171 FSRIYAPFSGRLGFSRYKVGEQITALLPPSSTMKNSLVSLTKVNVIN-FDFNVDEKVYRR 229

Query: 226 STLELRENIHEQKNMLRHIN 245
               +    +E K +   I 
Sbjct: 230 IRSAIDVVRNENKKLNLDIR 249


>gi|163800180|ref|ZP_02194081.1| multidrug resistance efflux pump [Vibrio sp. AND4]
 gi|159175623|gb|EDP60417.1| multidrug resistance efflux pump [Vibrio sp. AND4]
          Length = 376

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 78/251 (31%), Gaps = 16/251 (6%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  ++     +       +F          +     R++      L LE+      A + 
Sbjct: 73  RVIEVPVQANQPLQKGDVLFRIDPIPYQAEVDKLRARVKEASQGALGLESSVQEAEASV- 131

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
                   +K L E++  ++ + ++ +R   +      + +  ++   +      + A  
Sbjct: 132 --------LKALAERDK-ARREFDRYQRGFNRGAF-TEQQLDTRRQAFKAAQATLEVAQS 181

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSF-SSSNYA 312
           + A     +  ++       A  +++L   E   EQ  + +P AG +             
Sbjct: 182 KKAQAQIALDSEVGGENTQVASLLAELRKAEFNLEQTVVTAPTAGYVTQLALRPGVMAVP 241

Query: 313 QQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
               P+M  V      Y  A      +Q ++ G+ A   F          FK  + ++ P
Sbjct: 242 LPLAPVMTFVHTEDKFYTAA-FRQNSLQRLETGFEAEFMFRALPGH---VFKGEVIEVLP 297

Query: 373 IISQQDNNLQT 383
            I +       
Sbjct: 298 AIGESQVQASG 308



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 48/147 (32%), Gaps = 9/147 (6%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL-RCHIDTEKSALDFLNNK 123
           G + +  V+    + +G  L   + I     +D  +  +K   +  +  E S  +   + 
Sbjct: 72  GRVIEVPVQANQPLQKGDVLFRIDPIPYQAEVDKLRARVKEASQGALGLESSVQEAEASV 131

Query: 124 YDVLEKAFESREE--------QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
              L +  ++R E            F  +   T  + F    +++  +   K     ++ 
Sbjct: 132 LKALAERDKARREFDRYQRGFNRGAFTEQQLDTRRQAFKAAQATLEVAQSKKAQAQIALD 191

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMM 202
                   + + L A L   + +L   
Sbjct: 192 SEVGGENTQVASLLAELRKAEFNLEQT 218


>gi|149720547|ref|XP_001490113.1| PREDICTED: citron (rho-interacting, serine/threonine kinase 21)
           isoform 1 [Equus caballus]
          Length = 2026

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 7/188 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ++    DL D  K +++NL    + E      + ++   +  A +S+   L   + + 
Sbjct: 726 VLDNQIKKDLAD--KETLENLMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVEL 783

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                   N  + +  R++K +   +  +   +  LE ++  L A     ++ L   + +
Sbjct: 784 SEANKLAANSSLFT-QRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQL---EKI 839

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             ++   +N L + E  + + +LE  E   E K  L  +     E   +    L+     
Sbjct: 840 SHQDHSDKNRLLELETRLREVSLEHEEQKLELKRQLTELQLSLQERESQLT-ALQAARAA 898

Query: 266 LEQNQRTF 273
           LE   R  
Sbjct: 899 LESQLRQA 906



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 3/207 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESREEQLLDFL 142
              +     D +  K+   +  R  +  EKS  +    +   +   EK   +R +Q +   
Sbjct: 1025 VMDLEALNDELLEKERQWEAWRSVLGDEKSQFECRVRELQRMLDTEKQSRARADQRITES 1084

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +      K     I ++ ++LK +  +  S+     DLE K ++L     S Q+ L   
Sbjct: 1085 RQVVELAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQKLETE 1144

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            + L ++    Q  L QQ  +       L + + E  +    +     +   +  N     
Sbjct: 1145 RELKQRLLEEQAKLQQQMDLQKNHIFRLTQGLQEALDRADLLKTERSDLEYQLENIQVLY 1204

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQ 289
            S +  + + T + +   +  L+   +Q
Sbjct: 1205 SHEKVKMEGTISQQTKLIDFLQAKMDQ 1231



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/247 (11%), Positives = 72/247 (29%), Gaps = 40/247 (16%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-----------LDFLNNKYDVLEKAFES 133
            L     E    +   + +   L   +   K+            +  L    D +++ F++
Sbjct: 878  LQLSLQERESQLTALQAARAALESQLRQAKTELEETTAEAEEEIQALTAHRDEIQRKFDA 937

Query: 134  REE------QLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                      L + L +     +++ N    +S            +  +      L  + 
Sbjct: 938  LRNSCTVITDLEEQLNQLTEDNAELNNQNFYLSKQLDEASGANDEIVQLRSEVDHLRREI 997

Query: 186  SLLRALLSSHQKDLTMMKN---LFEKNAVSQN----DLNQQERIVYK------------- 225
            +     L+S ++ +  +K    + E+  +       +L ++ER                 
Sbjct: 998  TEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDELLEKERQWEAWRSVLGDEKSQFE 1057

Query: 226  -STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                EL+  +  +K      ++   E+       +KE   ++   Q+   ++  K   L 
Sbjct: 1058 CRVRELQRMLDTEKQSRARADQRITESRQVVELAVKEHKAEILALQQALKEQKLKAESLS 1117

Query: 285  KTREQKT 291
                   
Sbjct: 1118 DKLNDLE 1124


>gi|212450|gb|AAA48986.1| nonmuscle myosin heavy chain [Gallus gallus]
          Length = 1986

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 16/213 (7%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ E   L+  N+K+   +K  E R  +    L +       
Sbjct: 975  ARQKLQLEKVTAEAKIKKMEEEILLLEDQNSKFLKEKKLMEDRIAECTSQLAEEEEKAKN 1034

Query: 152  V-------------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +                 +    ++ +      R +     DL+++ + L+A +   +  
Sbjct: 1035 LAKLKNKQEMMITDLEERLKKEEKTRQELEKAKRKLDGETTDLQDQIAELQAQIEELKIQ 1094

Query: 199  LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            L   +   +      ++   Q+    K   EL+  I E +  L       ++A  +  + 
Sbjct: 1095 LAKKEEELQAALARGDEEAVQKNNALKVIRELQAQIAELQEDLESEKASRNKAEKQKRDL 1154

Query: 259  LKEISR---DLEQNQRTFADEMSKLTILEKTRE 288
             +E+     +LE    T A +    T  E+   
Sbjct: 1155 SEELEALKTELEDTLDTTAAQQELRTKREQEVA 1187



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 72/210 (34%), Gaps = 8/210 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE---KAFESREEQLLDFLGKYHS 147
            E        +  ++ +R  ++  +  L    +    LE   +A +++ E+ L    + + 
Sbjct: 1539 ELEKSKRTLEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQARDEQNE 1598

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLF 206
               ++    +  +   L+ +  +       +  +E     L   + +  K     +K L 
Sbjct: 1599 EKKRMLVKQVRELEAELEDERKQRALAVAAKKKMEMDLKDLEGQIEAANKARDEAIKQLR 1658

Query: 207  EKNA---VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            +  A     Q +L +      +   + +E+  + K +   I +L +E         +   
Sbjct: 1659 KLQAQMKDYQRELEEARASRDEIFAQSKESEKKLKGLEAEILQLQEEFAAS-ERARRHAE 1717

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            ++ ++     A+  S  + L   + +    
Sbjct: 1718 QERDELADEIANSASGKSALLDEKRRLEAR 1747



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 66/211 (31%), Gaps = 5/211 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            T +       +  K+            E++       +      A    E        K 
Sbjct: 1168 TLDTTAAQQELRTKREQEVAELKKAIEEETKNHEAQIQEIRQRHATALEELSEQLEQAKR 1227

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-N 204
                 +    G+ S  + L  ++  ++ +         K       L++   +   ++  
Sbjct: 1228 FKANLEKNKQGLESDNKELACEVKVLQQVKAESEHKRKKLDAQVQELTAKVTEGERLRVE 1287

Query: 205  LFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            L EK    QN+L+          K  ++  ++    ++ L+   EL  E   +  N    
Sbjct: 1288 LAEKANKLQNELDNVSSLLEEAEKKGIKFAKDAASLESQLQDTQELLQEETRQKLNLSSR 1347

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            I R LE+ +    ++  +     K  E++ +
Sbjct: 1348 I-RQLEEEKNNLQEQQEEEEEARKNLEKQML 1377



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 77/207 (37%), Gaps = 7/207 (3%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  +  +     D    ++  L     T +  ++ +  + + LE   ++ E+  L     
Sbjct: 1519 LRADMEDLMSSKDDVGKNVHELEKSKRTLEQQVEEMRTQLEELEDELQATEDAKLRLEVN 1578

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK---DLTM 201
              +  ++      +   ++ + K   ++ +     +LE++       +++ +K   DL  
Sbjct: 1579 MQAMKAQFERDLQARDEQNEEKKRMLVKQVRELEAELEDERKQRALAVAAKKKMEMDLKD 1638

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            ++   E    ++++  +Q R +     + +  + E +     I     E+  +    LK 
Sbjct: 1639 LEGQIEAANKARDEAIKQLRKLQAQMKDYQRELEEARASRDEIFAQSKESEKK----LKG 1694

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTRE 288
            +  ++ Q Q  FA         E+ R+
Sbjct: 1695 LEAEILQLQEEFAASERARRHAEQERD 1721



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                D      KN+      E+   +    + +    +  +R  +      +     +K 
Sbjct: 1460 QKKFDQMLAEEKNISARYAEERDRAEAEAREKETKALSL-ARALEEALEAKEEFERQNKQ 1518

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM----------- 201
                +  +  S       +  +  ++  LE +   +R  L   + +L             
Sbjct: 1519 LRADMEDLMSSKDDVGKNVHELEKSKRTLEQQVEEMRTQLEELEDELQATEDAKLRLEVN 1578

Query: 202  ---MKNLFEKNAVSQNDLNQQER-----IVYKSTLELRENIHEQKNMLRHINELY----- 248
               MK  FE++  ++++ N++++      V +   EL +   ++   +    ++      
Sbjct: 1579 MQAMKAQFERDLQARDEQNEEKKRMLVKQVRELEAELEDERKQRALAVAAKKKMEMDLKD 1638

Query: 249  DEANLEFANYLK-EISRDLEQNQRTFADEMSKLTILEKTRE 288
             E  +E AN  + E  + L + Q    D   +L     +R+
Sbjct: 1639 LEGQIEAANKARDEAIKQLRKLQAQMKDYQRELEEARASRD 1679


>gi|110637354|ref|YP_677561.1| acriflavine resistance protein E [Cytophaga hutchinsonii ATCC
           33406]
 gi|110280035|gb|ABG58221.1| acriflavine resistance protein E [Cytophaga hutchinsonii ATCC
           33406]
          Length = 374

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 49/168 (29%), Gaps = 13/168 (7%)

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             ++L++ +   E+        +   E  +     L+    DL+  +       + L   
Sbjct: 103 ADASLKIAQANFEKTRKDAERYKQLGEKGMTTQQRLEYSEADLQTAESQVTAAKANLQRA 162

Query: 284 EKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ-HV 342
           +   +   I++P  GTI          +    Q  +  V  +    I   V  K+I   V
Sbjct: 163 QIDLQHSIIIAPFDGTI-GISLVKMGAFVTAGQTKLNTVSSNDPISIDFVVNEKEISHFV 221

Query: 343 KKGYTATVRFPHYADIREKKF--------KAIIEKIDPIISQQDNNLQ 382
                   +   Y  +                I  +D  +  Q   L+
Sbjct: 222 TLEQR---KLTKYDSLFTLALPDNSIYPYPGKILFLDRAVDMQTGTLK 266



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 3/133 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +   N V + S  SG I     + G Q+ +G  L   E  +          S+K  + + 
Sbjct: 55  VVALNTVVLNSEVSGFITGIYFQEGQQVRKGQKLYEIEQSKYQAAYSSADASLKIAQANF 114

Query: 111 DTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
           +  +   +    L  K    ++  E  E  L     +  +  + +    I   +  +   
Sbjct: 115 EKTRKDAERYKQLGEKGMTTQQRLEYSEADLQTAESQVTAAKANLQRAQIDLQHSIIIAP 174

Query: 168 LTRMRSIYLNRLD 180
                 I L ++ 
Sbjct: 175 FDGTIGISLVKMG 187


>gi|327393832|dbj|BAK11254.1| acriflavine resistance protein A precursor AcrA [Pantoea ananatis
           AJ13355]
          Length = 384

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 44/129 (34%), Gaps = 4/129 (3%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +   ++V  ++   SG I       G ++ +G  L T +D      ++  K ++   R
Sbjct: 58  GRVEAVESVQ-LRPRVSGYIDSVNYHEGDEVRKGQVLFTIDDRSYRAALEQAKATLARAR 116

Query: 108 CHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                  +E +  + L     V  + +E R            +  S V    ++  +  +
Sbjct: 117 SQASLTRSESARTEKLVGTQAVSREMWEQRRSTASQAQADVQAAESSVDMAQLNLDFTRV 176

Query: 165 KMKLTRMRS 173
              +    S
Sbjct: 177 TAPIDGRAS 185


>gi|327283209|ref|XP_003226334.1| PREDICTED: Golgin subfamily A member 3-like [Anolis carolinensis]
          Length = 1512

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 83/204 (40%), Gaps = 5/204 (2%)

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVF 153
            D  +  +  L+    ++  ++ +L N+  VLE A +  +   + LD   ++    ++  
Sbjct: 757 YDEVEARLTELQGEATSKDDSIRYLQNEKIVLEVALQVAKAGKEGLDEGVQHLGESTEAA 816

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           +  +  + + L +K +++ ++       + ++  ++  L   +  +   +          
Sbjct: 817 SDVLEQLRQELAIKSSQVENLQQESTAFKKQTQKIKEQLLQQKVMVEAYRRDASSKDQLI 876

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHI---NELYDEANLEFANYLKEISRDLEQNQ 270
           ++L   ++ +     ELR  +   ++  + +   N    +        L+E+   L+  Q
Sbjct: 877 SELKATKKRLDSEMKELRRELLHLRDEKKSVDIENAKLAKEVSRVQKQLEELESQLQVAQ 936

Query: 271 RTFADEMSKLTILEKTREQKTILS 294
           R      ++L  ++  REQ ++L+
Sbjct: 937 RERDGMEAELQSVQFDREQMSVLA 960



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 85/216 (39%), Gaps = 3/216 (1%)

Query: 82   TPLLTFEDIETTDLID-LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD 140
              +++    E  +  + + ++  +         K       NK   LE   E  +   L 
Sbjct: 1075 QEVISLTSQELEEYREKVLELEDELQEARGFRRKIKRLEEMNKKLALELEHERGKLTGLG 1134

Query: 141  FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL-RALLSSHQKDL 199
                     +++    ++     L     +++++   + + + +   L +AL ++ +++ 
Sbjct: 1135 QSNAALREHNRILEAALAKREADLVQLNLQVQAVLKRKEEEDQQMRQLIQALQTALEREK 1194

Query: 200  TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
            T +K+L E+   ++ +     R    + LEL E   E +     I  L DE N +     
Sbjct: 1195 TKVKDLKEQIVTAKAEAAHNRRHYKAAALELSEVQRELQAKDALIQALQDEVN-KLQITE 1253

Query: 260  KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
             + S ++ Q Q+  A+  S+L +LE+   ++    P
Sbjct: 1254 GKHSEEVSQFQQELAEARSQLQLLEQQLNEQLNKQP 1289



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 69/191 (36%), Gaps = 5/191 (2%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            K+++      ++A+  L+ +      A ES E +L     +   +        I ++   
Sbjct: 1000 KDMKAKHKAYENAVGILSRRLQEALTAKESSEAELNKLKAQISDSNIICLQEKIQALETE 1059

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIV 223
            L++      S  +   +L+   SL    L  +++ +  +++  ++    +  + + E + 
Sbjct: 1060 LQVL---SHSKMVLEKELQEVISLTSQELEEYREKVLELEDELQEARGFRRKIKRLEEMN 1116

Query: 224  YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
             K  LEL     +    L   N    E N      L +   DL Q        + +    
Sbjct: 1117 KKLALELEHERGKLTG-LGQSNAALREHNRILEAALAKREADLVQLNLQVQAVLKR-KEE 1174

Query: 284  EKTREQKTILS 294
            E  + ++ I +
Sbjct: 1175 EDQQMRQLIQA 1185


>gi|319794017|ref|YP_004155657.1| efflux transporter, rnd family, mfp subunit [Variovorax paradoxus
           EPS]
 gi|315596480|gb|ADU37546.1| efflux transporter, RND family, MFP subunit [Variovorax paradoxus
           EPS]
          Length = 418

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/119 (10%), Positives = 46/119 (38%), Gaps = 3/119 (2%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID---T 112
            V+++S  +G ++      G+ + QG  L+T +       ++  +  + + +       +
Sbjct: 81  RVDVRSRVAGAVQAVHFREGALVKQGDLLITIDPAPYAAEVERAEAQVASAQARQAFSRS 140

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           E+     L ++  + ++  + R     +      +  + +    +S  Y  ++  ++  
Sbjct: 141 EQERARRLWDEQAIAQRELDERVNAGREAEANLRAAQASLQTARLSLGYTQVRAPVSGR 199



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/108 (12%), Positives = 33/108 (30%), Gaps = 8/108 (7%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           ++ + E  V  +      +  EQ+   R  +E            L E      + +    
Sbjct: 120 EVERAEAQVASAQARQAFSRSEQERARRLWDE-----QAIAQRELDERVNAGREAEANLR 174

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA--QQSQPLMK 320
              + L     +     + +P++G I   +  +  N        P++ 
Sbjct: 175 AAQASLQTARLSLGYTQVRAPVSGRIGKLEV-TVGNLVAAGPGAPVLT 221


>gi|296314387|ref|ZP_06864328.1| multidrug efflux periplasmic linker protein BpeA [Neisseria
           polysaccharea ATCC 43768]
 gi|296838946|gb|EFH22884.1| multidrug efflux periplasmic linker protein BpeA [Neisseria
           polysaccharea ATCC 43768]
          Length = 412

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 57/170 (33%), Gaps = 2/170 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GII+K   + GS +  G PL   +       ++  +  +   +  +   K+  D
Sbjct: 75  VRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEAGLESARAQLATAQATLA--KADAD 132

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  V  +A   +E        +      K     I S   SL              
Sbjct: 133 LARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQAAIKSAGISLNRSRITAPISGFIG 192

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               ++ +LL A  ++    +     ++     S +++ +  R + +  L
Sbjct: 193 QSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKL 242


>gi|260576933|ref|ZP_05844915.1| secretion protein HlyD family protein [Rhodobacter sp. SW2]
 gi|259020869|gb|EEW24183.1| secretion protein HlyD family protein [Rhodobacter sp. SW2]
          Length = 313

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 49/150 (32%), Gaps = 11/150 (7%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           L     E++  ++RA L   + D    + L   N    + L  Q R+      +L   + 
Sbjct: 90  LQTGSREDEIEVIRASLHKAEAD----QRLARLNLDRASQLLAQGRVPQAEVDQLSAALQ 145

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSP 295
                +  +      A L     L      +   Q T     ++  +       + + +P
Sbjct: 146 SADAQMEQLAAQLRVAQLPARQAL------VLAAQATLDQRRAEADLARVNLSDRVLTAP 199

Query: 296 IAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
           + G I     F +   A    P++ I+P  
Sbjct: 200 VGGVIEKL-FFDAGEVAATGAPVVSILPEG 228



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 50/154 (32%), Gaps = 5/154 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL---DFLN 121
           G I    V  G  +  G  L T E+      +     ++   +  ++  ++     +   
Sbjct: 42  GRIVAIPVTEGLAVQAGQQLATLENTSQAAQLQAALAAVAVAQATLENLQTGSREDEIEV 101

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +  + +   + R  +L            +V    +  +  +L+    +M  +       
Sbjct: 102 IRASLHKAEADQRLARLNLDRASQLLAQGRVPQAEVDQLSAALQSADAQMEQLAAQLR-- 159

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             +    +AL+ + Q  L   +   +   V+ +D
Sbjct: 160 VAQLPARQALVLAAQATLDQRRAEADLARVNLSD 193


>gi|197103867|ref|YP_002129244.1| HlyD family secretion protein [Phenylobacterium zucineum HLK1]
 gi|196477287|gb|ACG76815.1| HlyD family secretion protein [Phenylobacterium zucineum HLK1]
          Length = 381

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 47/142 (33%), Gaps = 6/142 (4%)

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
              + Q +       + L  L+    + ++ +P++G ++          A    P  +I 
Sbjct: 139 QEQIAQRRFQAQAARANLRDLQTRMRKLSVAAPVSGLVLERTVRPGDLAAGAGTPWFRIA 198

Query: 323 PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
                  + A ++   +  ++ G TATV  P          +  +  + P I  Q    +
Sbjct: 199 -RDGQIELSADMSQDDLARIRPGQTATVTLP-----NGPAVQGRVRLVSPQIDPQTKLGE 252

Query: 383 TQEYYEVILKITDLAFSDNNIE 404
            +    V   I    F+    +
Sbjct: 253 VRILLPVRSDIRAGGFARAEFD 274


>gi|194759043|ref|XP_001961759.1| GF15126 [Drosophila ananassae]
 gi|190615456|gb|EDV30980.1| GF15126 [Drosophila ananassae]
          Length = 2184

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 67/176 (38%), Gaps = 7/176 (3%)

Query: 111  DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLKMKL 168
            DT        + +   L+++ E  + +++ F G+  +   ++   N  I  +   ++   
Sbjct: 1005 DTLPMPAQLESEEVTALKESLEELKAKVIQFQGELDNQLKQLQLKNENIEQLQAEIQELN 1064

Query: 169  TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
             R  S+ + +++L+ +S   +  L      L   + L +K   S  +L  +     KS  
Sbjct: 1065 ERCLSMDVRQVELQLESDQKQQQLDRQALKLAEDRTLIDKLQESNANLLDRSIKAEKSVA 1124

Query: 229  ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            EL+E +    ++             E    L E+   L + +     +  ++  L+
Sbjct: 1125 ELQERLSASDSLQDQ-----GIIGAELEKELNELREQLLKTREDLKSKSEQINDLQ 1175



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/207 (11%), Positives = 76/207 (36%), Gaps = 13/207 (6%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            ++ +   K S++ L+  +   +  LD    +  +  +  E  + ++ +   +  S   + 
Sbjct: 1015 SEEVTALKESLEELKAKVIQFQGELDNQLKQLQLKNENIEQLQAEIQELNERCLSMDVRQ 1074

Query: 153  FNYGISSVYRSLKMKLTRMR---------SIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                + S  +  ++    ++          +  +  +L ++S      ++  Q+ L+   
Sbjct: 1075 VELQLESDQKQQQLDRQALKLAEDRTLIDKLQESNANLLDRSIKAEKSVAELQERLSASD 1134

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            +L ++  +      + E+ + +   +L +   + K+    IN+L  E   +      E  
Sbjct: 1135 SLQDQGIIGA----ELEKELNELREQLLKTREDLKSKSEQINDLQLEYLQKLETCESENR 1190

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQK 290
             +  +    + +   K      T +++
Sbjct: 1191 ANFRRYNLEWEESRDKYESTVATLKEQ 1217


>gi|167950295|ref|ZP_02537369.1| efflux transporter, RND family, MFP subunit [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 159

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 49/146 (33%), Gaps = 19/146 (13%)

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK 333
           AD + K   + +   + T+LS   GT++ +         +  Q L  I       ++ A+
Sbjct: 14  ADRLVKGNTISQADGRFTLLSLQQGTVIRDDFI-LGQMVEPGQLLFDIT-DESRLWVEAR 71

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKI 393
           + P+ + H+K G  A V          K  +  + +I   + +    L       V L+I
Sbjct: 72  INPESLSHLKIGAPARV------QAGGKWIEGKVIQIHHALDETTRTLA------VRLEI 119

Query: 394 TDLAFSDNNIELRNGFPAEVLFTAKN 419
              A       L  G           
Sbjct: 120 AHPAD-----RLHPGQFVTARIQTGE 140


>gi|50541907|gb|AAT78426.1| unknown [Azospirillum brasilense]
          Length = 315

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/361 (12%), Positives = 86/361 (23%), Gaps = 88/361 (24%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           I +P +G +    V  G ++  G PL   +                              
Sbjct: 37  IAAPVAGTLDTLAVTRGGRVEAGAPLFALDRTSARA------------------------ 72

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               + D L  A      +L D           V                          
Sbjct: 73  ----ERDRLAAALGQARAELADLRTGRRPDELAV-------------------------- 102

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQK 238
             +  + +   A L   + +L   + L  +   S + L+            L E   +  
Sbjct: 103 --VSAQRAQAEAALRYSEVELARQQTLVARKVSSDDRLDAARASRDGDRARLEELTAQLA 160

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                       A        +      ++     A    +  ++E T            
Sbjct: 161 VSNLPARPEQIRAAENAVAQAEAALAQADKRLTELAPPAPEAALVEDTL----------- 209

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
                  F+   +     P++ ++P  K   +   V    +  V+ G   TVR       
Sbjct: 210 -------FNPGEWVPAGAPVVSLLPPGKRKLV-VFVPELLMARVRPGDRVTVRCDGCP-- 259

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEV----ILKITDLAFSDNNIELRNGFPAEVL 414
                 A +  + P +            Y V     L +   A  ++   L  G P +V 
Sbjct: 260 --PGLSARVTYVAPRV-----EYTPPVIYSVGSREKLVVRVEARLEDGATLNPGLPVDVE 312

Query: 415 F 415
            
Sbjct: 313 L 313


>gi|16127349|ref|NP_421913.1| efflux system protein [Caulobacter crescentus CB15]
 gi|13424779|gb|AAK25081.1| efflux system protein, putative [Caulobacter crescentus CB15]
          Length = 354

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 73/221 (33%), Gaps = 25/221 (11%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN----QR 271
           +    +I    ++   + I           +   +A+LE      E  + L +     ++
Sbjct: 71  VLTTMKIEAGDSVRAGQLIAAIDPAGVDARQQQTQADLERVRRDLERDKVLFEKGYVSRQ 130

Query: 272 TFADEMSKLTILE-------KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
              D  S L   +         R    ++SP++G ++  ++ +        Q + ++   
Sbjct: 131 RIDDRTSALKAAQAAYDAAHFDRRWANLVSPVSGVVLERRAQA-GEVVGAGQVVARVADL 189

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +    +R  +  +    ++ G  ATV+     +I E      + ++      +   +  +
Sbjct: 190 TSPLVLRLPLAARDAARIRVGDPATVKV---DEIGETALNGRVTRVGEAADARTGAVLVE 246

Query: 385 EYYEV---ILKITDLAFSDNNIELRNG-------FPAEVLF 415
                    L+   +A +  N+    G        PAE + 
Sbjct: 247 IELSAPPSTLRSGQVAHATLNVRAAPGVTTTYARVPAEAVL 287



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 12/139 (8%), Positives = 43/139 (30%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++   ++E G  +  G  +   +           +  ++ +R  ++ +K   +      
Sbjct: 70  GVLTTMKIEAGDSVRAGQLIAAIDPAGVDARQQQTQADLERVRRDLERDKVLFEKGYVSR 129

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             ++    + +     +   +           +S V    + +   +         + + 
Sbjct: 130 QRIDDRTSALKAAQAAYDAAHFDRRWANLVSPVSGVVLERRAQAGEVVGAGQVVARVADL 189

Query: 185 SSLLRALLSSHQKDLTMMK 203
           +S L   L    +D   ++
Sbjct: 190 TSPLVLRLPLAARDAARIR 208


>gi|32471542|ref|NP_864535.1| cation efflux system (czcB-like) [Rhodopirellula baltica SH 1]
 gi|32443383|emb|CAD72216.1| probable cation efflux system (czcB-like) [Rhodopirellula baltica
           SH 1]
          Length = 321

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 67/182 (36%), Gaps = 22/182 (12%)

Query: 23  LSIIGIIGLITWSILLPIEISVSSSGE---------ILNEDNVVEIK-----SPFSGIIK 68
            +++G+   + + +   +  + +++G             E     I+     S   G I 
Sbjct: 19  WTVVGLSVFVAFHLTADLASAQATTGTQRGIALYGDSAYEGFSQAIEDIYLSSEDLGRII 78

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           +  V+ G ++     +  F+D      +++ +    ++   I+  ++ALD    + + L 
Sbjct: 79  ELPVKVGQRVKANDVIARFDDEIEKASMEIAQAQ-ASMMGEINAAQAALDMQTIRVEHLR 137

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +        L D +              I++       +   +RS   NRL+L+ K   +
Sbjct: 138 RL-------LRDEMAGSDELRRAEMELKIAAARLLTATEQRTLRSAEANRLELQWKRRTI 190

Query: 189 RA 190
           RA
Sbjct: 191 RA 192



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 71/231 (30%), Gaps = 42/231 (18%)

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
           ++E  S  +    +S   ++   +   +   +    L +  R     + ELR    E K 
Sbjct: 100 EIEKASMEIAQAQASMMGEINAAQAALDMQTIRVEHLRRLLRDEMAGSDELRRAEMELKI 159

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
               +    ++  L  A   +                      LE   +++TI +P  G 
Sbjct: 160 AAARLLTATEQRTLRSAEANR----------------------LELQWKRRTIRAPFDGV 197

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP-KQIQ-HVKKGYTATVRFPHYAD 357
           +   ++         S P  +IV   +   +             +K G    V F     
Sbjct: 198 VAEKKA-GLGATITPSSP--EIVRLVRTDTLHGVFNVMADRALQMKPGMETQVYFRA--- 251

Query: 358 IREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
              K     I+ I P I+ +   +      E+ ++I +        ELR G
Sbjct: 252 -ARKTVDGKIDTIGPSINSESGTI------EIRVRIDNPT-----GELRPG 290


>gi|17548891|ref|NP_522231.1| transporter lipoprotein transmembrane [Ralstonia solanacearum
           GMI1000]
 gi|17431141|emb|CAD17821.1| probable transporter lipoprotein transmembrane [Ralstonia
           solanacearum GMI1000]
          Length = 1405

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 48/169 (28%), Gaps = 19/169 (11%)

Query: 251 ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSN 310
           +  E   Y  +      +     A   S+    +       +L+P  G I   +S +   
Sbjct: 140 SQQELIQYDTQAKTAAAKLASARAQFDSQ----QIRLRYTRVLAPDDGVI-SARSATVGA 194

Query: 311 YAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI 370
                  L K++        RA+V    +  ++ G  A +R      +        + +I
Sbjct: 195 VVSAGTELFKLI-RKNRLEWRAEVHGDLLPGIRPGQAARLR-----RMDGGTVAGRVRQI 248

Query: 371 DPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
            P +     N        V + +   A     ++   G          +
Sbjct: 249 APTVDASTRNG------LVYIDLPAEAGGPGGVK--AGMYLSGEILLGD 289


>gi|332250912|ref|XP_003274593.1| PREDICTED: centrobin [Nomascus leucogenys]
          Length = 819

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 67/214 (31%), Gaps = 9/214 (4%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
                 +  + +   + S+      ++ E+ +      + + LE+  ++    L     +
Sbjct: 169 AELTRSKQQETVTHLEQSLSEAMEALNREQESARLQQREKETLEEERQALTLSLEAEQQR 228

Query: 145 --YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK-----SSLLRALLSSHQK 197
                        G  S +R L+     +          E++      +L     +  ++
Sbjct: 229 CCALQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQALQEESQAQLER 288

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +    +   +    +Q+ L   +  V +   EL     E+  +   ++ +      +   
Sbjct: 289 EKEKSQREAQAAWEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARYESQRIQ 348

Query: 258 YLKEISRDLEQ--NQRTFADEMSKLTILEKTREQ 289
              E++  LEQ   +R    + S L      RE 
Sbjct: 349 LESELAVQLEQQVTERLAQAQESSLRQAASLREH 382



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 62/195 (31%), Gaps = 10/195 (5%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           LT             +      R    +E   L+ L    +   + +  +E QL +    
Sbjct: 218 LTLSLEAEQQRCCALQEERDAARAGQLSEHRELETLRAALEEERQTWAQQEHQLKEHYQA 277

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD---LENKSSLLRALLSSHQKDLTM 201
                            R  +        + L + +   LE +    R    + Q ++++
Sbjct: 278 LQEESQAQLEREKEKSQREAQAAWEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSL 337

Query: 202 MKNLFEKNAVSQ-----NDLNQQ--ERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           ++  +E   +         L QQ  ER+       LR+    +++  + + +L  +   E
Sbjct: 338 VQARYESQRIQLESELAVQLEQQVTERLAQAQESSLRQAASLREHHRKQLQDLSGQHQQE 397

Query: 255 FANYLKEISRDLEQN 269
            A+ L +   +  Q 
Sbjct: 398 LASQLAQFKVESSQV 412


>gi|296214575|ref|XP_002807255.1| PREDICTED: LOW QUALITY PROTEIN: myosin-6-like [Callithrix jacchus]
          Length = 1942

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 88/242 (36%), Gaps = 31/242 (12%)

Query: 72   VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
            V    ++ +    L  E +E    ++  + S+++    I   ++ L+F   K ++  K  
Sbjct: 1528 VHELEKVRKQ---LEVEKLELQSALEEAEASLEHEEGKI--LRAQLEFNQIKAEIERKLA 1582

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE  ++   + H          + +  RS    L   + +  +  ++E + S    +
Sbjct: 1583 EKDEE--MEQAKRNHQRVVDSLQTSLDAETRSRNEALRVKKKMEGDLNEMEIQLSHANRM 1640

Query: 192  LSSHQKDLTMMKNLFEKNAV-------SQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             +  QK +  +++L +   +       + +DL +   IV +    L+  + E + ++   
Sbjct: 1641 AAEAQKQVKSLQSLLKDTQIQLDDAVHANDDLKENIAIVERRNNLLQAELEELRAVVEQT 1700

Query: 245  NELYDEANLE-----------------FANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                  A  E                   N  K++  DL Q Q    + + +    E+  
Sbjct: 1701 ERSRKLAEQELIETSERVQLLHSQNTSLINQKKKMESDLTQLQSEVEEAVQECRNAEEKA 1760

Query: 288  EQ 289
            ++
Sbjct: 1761 KK 1762



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 73/203 (35%), Gaps = 5/203 (2%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  E  + ++ K  S++  +  +  E   L     + +    A + ++      L ++  
Sbjct: 1404 DAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAEWKQ 1463

Query: 148  --TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                S+          RSL  +L ++++ Y   L+        +    + Q++++ +   
Sbjct: 1464 KYEESQSELESSQKEARSLSTELFKLKNAYEESLE---HLETFKRENKNLQEEISDLTEQ 1520

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
              +   + ++L +  + +    LEL+  + E +  L H       A LEF     EI R 
Sbjct: 1521 LGEGGKNVHELEKVRKQLEVEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1580

Query: 266  LEQNQRTFADEMSKLTILEKTRE 288
            L +              +  + +
Sbjct: 1581 LAEKDEEMEQAKRNHQRVVDSLQ 1603



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 72/214 (33%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  +D   S ++ +      LEK   + E+Q  ++  K 
Sbjct: 1211 QIDNLQRVKQKLEKEKS--EFKLELDDVTSNMEHIIKAKANLEKVSRTLEDQANEYRVKL 1268

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                + R L+ K   +  +   +L    +   L+  L    
Sbjct: 1269 EEAQRSLNDFTTQRAKLQTENGELARQLEEKEALISQLTRGKLSYTQQMEDLKRQLEEEG 1328

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1329 KAKNALAHALQSARHDCDXLREQYEEETEAKAELQRVLSKANSEVAQWRTKYETDAIQRT 1388

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L+E  + L Q  +   + +  +     + E+ 
Sbjct: 1389 EELEEAKKKLAQRLQDAEEAVEAVNAKCSSLEKT 1422



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/252 (11%), Positives = 80/252 (31%), Gaps = 29/252 (11%)

Query: 57   VEIKSPFSGIIKKFQVE----------NGSQILQGTPLLTF--EDIETTDLIDLKKVSIK 104
             ++      + ++ +V            G   L    ++    + ++  + +  K+  I 
Sbjct: 1034 QQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKLQLDEKLKKKEFDIN 1093

Query: 105  NLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
             L   I+ E++    L  +  + E      E +      +      +     +S     +
Sbjct: 1094 QLNSKIEDEQALA--LQLQKKLKENQARIEELEEELEAERTARAKVEKLRSDLSRELEEI 1151

Query: 165  KMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
              +L         ++++  K            +   M ++L E     +       +   
Sbjct: 1152 SERLEEAGGATSVQIEMNKKREA---------EFQKMRRDLEEATLQHEATAAALRKKHA 1202

Query: 225  KSTLELRENIHEQKNMLRHINELYDEANLEFANYLK------EISRDLEQNQRTFADEMS 278
             S  EL E I   + + + + +   E  LE  +         +   +LE+  RT  D+ +
Sbjct: 1203 DSVAELSEQIDNLQRVKQKLEKEKSEFKLELDDVTSNMEHIIKAKANLEKVSRTLEDQAN 1262

Query: 279  KLTILEKTREQK 290
            +  +  +  ++ 
Sbjct: 1263 EYRVKLEEAQRS 1274



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 68/203 (33%), Gaps = 14/203 (6%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            +  +  +    ++      +N         T+ + +     K        E  ++ +   
Sbjct: 1735 MESDLTQLQSEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQT 1794

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            +        +     +    + L+    R+R +     +LE +       +   +K    
Sbjct: 1795 IKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEN---ELEAEQKRNAESVKGMRKSERR 1851

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +K L  +    + +L + + +V K  L++       K   R   E  ++AN   + + K 
Sbjct: 1852 IKELTYQTEEDKKNLLRLQDLVDKLQLKV-------KAYKRQAEEAEEQANTNLSKFRK- 1903

Query: 262  ISRDLEQNQRTFADEMSKLTILE 284
            +  +L++ +       S++  L 
Sbjct: 1904 VQHELDEAEERADIAESQVNKLR 1926


>gi|291537428|emb|CBL10540.1| hypothetical protein ROI_37630 [Roseburia intestinalis M50/1]
          Length = 519

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/416 (11%), Positives = 130/416 (31%), Gaps = 93/416 (22%)

Query: 67  IKKFQVENGSQILQGTPLLTFED-------IETTDLIDLKKVSIKNLRCHID-------- 111
           +++    +G  + +G  L    D        +  D I   + ++K    ++         
Sbjct: 84  VEEVYASSGDTVSKGDALFKLTDESMEAAKSDYEDAISDAENTLKTAEANLASGKLSAES 143

Query: 112 -------TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV------------ 152
                  T ++A D    + D L+ A E ++E   + + +     +K+            
Sbjct: 144 TKQDADLTAQTAADSYQAQVDALDAAVEEKKEAYDEAVEQISEYQTKIDNNDYYVECAID 203

Query: 153 ----------------------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
                                      +S  +++   LT +++      D +   S+++ 
Sbjct: 204 EKKDAVDAATTALAQAQDTLTQAQNSDNSASQAVSTDLTYIKAQIEAGADSDTLLSVVQQ 263

Query: 191 L---LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
                ++ ++    +    +    +Q+ L Q ++    +     +N+ E    +  + + 
Sbjct: 264 AMDDYTTREQQSDTLTQAQQSADAAQSTLEQAQKEFDSAVETYNKNVEETNTKITELTDS 323

Query: 248 YDEANLEFANYLKEISRDLEQNQRT------------------FADEMSKLTILEKTR-- 287
            D+   ++    ++ +    + Q                     ++  S +   + T   
Sbjct: 324 LDDLKSDYEQAERDATTQKAELQNEYDTAVVEGKYAGSTYESTVSELESAVESAQDTLDT 383

Query: 288 ---EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK------IVPHSKLTYIRAKVTPKQ 338
              EQ  +L+   G +  ++  + +    +++  ++      +   ++   I  +V  + 
Sbjct: 384 LKEEQTALLALENGVVTADEDGTIAAVPYEAEDTLQSGTAFALYCDTQTIMISVEVPQEN 443

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           I  V  G   +V        R+      +  I    S       +   Y VI+ I 
Sbjct: 444 IAQVGVGDEVSVMIAG---NRDGAVTGTVSSIA--SSATTGGSVSNVTYAVIISID 494


>gi|229829798|ref|ZP_04455867.1| hypothetical protein GCWU000342_01896 [Shuttleworthia satelles DSM
           14600]
 gi|229791787|gb|EEP27901.1| hypothetical protein GCWU000342_01896 [Shuttleworthia satelles DSM
           14600]
          Length = 502

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 95/334 (28%), Gaps = 52/334 (15%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           I  SV+ SG++ +  +        +  IK   V+ G ++  G  +   +        D  
Sbjct: 54  IVKSVTGSGKVTSVQSQDLTSDLLASPIKTVNVKVGDRVRAGQLIAQMDTSRLEASRDSL 113

Query: 100 KVSIKNLR-CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           K  I++ R    +TE              +   +  EE+L            +       
Sbjct: 114 KEQIRSARQAQKETETQLAQQAAQAAQAKQSQLQGIEEKL------------EEVRSRED 161

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
              +SL     +++       DLE  S    A L++ +  +            SQ  L  
Sbjct: 162 QAEKSLSQAQDKLK------RDLETGSGADAATLAADRVRVEQ----------SQAALTA 205

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
            +        +L    +     L  +            + L+                  
Sbjct: 206 LQAQETALQAQLEALENAPSADLSSLGNAGSSVTESSISSLQNQLD-------------- 251

Query: 279 KLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ 338
               L++  ++  I + + G +   Q  + +        + +I        I A V    
Sbjct: 252 ---QLQQQIDKGAIRASMDGLVT--QVKAEAGKTYSGGTIARI-EDDSSFQILATVAEAD 305

Query: 339 IQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           I  V+ G    V+        E +    +  + P
Sbjct: 306 IPDVQAGMAVKVKTGA---TGEAELDGNVTAVAP 336


>gi|298530179|ref|ZP_07017581.1| efflux transporter, RND family, MFP subunit [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509553|gb|EFI33457.1| efflux transporter, RND family, MFP subunit [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 417

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 84/289 (29%), Gaps = 54/289 (18%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           + +     +      + F   +     +LK      R+  +  + LE +     + +   
Sbjct: 90  QVVARLDPRDFRLAVQNFEGSLGEARSNLKAMQEGARTEDV--ISLEAELRAAGSAVRES 147

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
           Q      K L+E+ AV++ +L++ E  + ++    R    E +  L    +         
Sbjct: 148 QLQYRRHKELYEQGAVARAELDRTETALEEARGRKRHLEMELQKALIGARD--------- 198

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS-FSSSNYAQQ 314
                    D++  Q       + L   +   +   + +P +G I         +     
Sbjct: 199 --------EDIQAMQSRIESLEAALEEAQSALQDSVLRAPFSGYIAEKHVENHEN--ISA 248

Query: 315 SQPLMKIVPHSKLTYIRAK--------VTPKQIQHVKKGYTATVRFPHYADIREKKFKAI 366
            QP+  +     LT +  K        V    I+ V            Y         A 
Sbjct: 249 GQPVATL---QDLTRLEVKFGLPEQLVVQKDDIKEVYC------ILDAYPGF---PLPAR 296

Query: 367 IEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           ++++     +          Y+    +T       NI       A+V  
Sbjct: 297 LKEVSTDARELS--------YKATAILTM----PENIRALPSMAAQVHI 333



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 62/171 (36%), Gaps = 22/171 (12%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL---DFLNNK 123
           ++  +V+ G  + +G  +   +  +    +   + S+   R ++   +      D ++ +
Sbjct: 75  LQSLEVDTGDYVHKGQVVARLDPRDFRLAVQNFEGSLGEARSNLKAMQEGARTEDVISLE 134

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++       RE QL     K       V    +     +L+    R R +         
Sbjct: 135 AELRAAGSAVRESQLQYRRHKELYEQGAVARAELDRTETALEEARGRKRHL--------- 185

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
           +  L +AL+ +  +D+  M          Q+ +   E  + ++   L++++
Sbjct: 186 EMELQKALIGARDEDIQAM----------QSRIESLEAALEEAQSALQDSV 226


>gi|212636224|ref|YP_002312749.1| membrane-fusion protein [Shewanella piezotolerans WP3]
 gi|212557708|gb|ACJ30162.1| Membrane-fusion protein [Shewanella piezotolerans WP3]
          Length = 381

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 82/214 (38%), Gaps = 22/214 (10%)

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE-M 277
           Q+  +  + ++ +     ++      +E       +       +S  + ++Q+   D   
Sbjct: 114 QQGDLLFTLIDRQAKAALEEARAFLKDETRKLEEFKQLGEKGGVSNTVRESQQVSVDIAQ 173

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY-IRAKVTP 336
           +++   +   +   IL+PI+GT +   + +      ++ P+M +   +     +   +  
Sbjct: 174 ARVNAAQVNYDYHRILAPISGT-LGLVNITEGQRLIKNTPVMTL--DNTELMQLDLSIPE 230

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
           K I  + KG    ++   +    E+ FK  +E ID  +  Q  ++      ++ + I ++
Sbjct: 231 KYIAKLAKGQNIIIKVSAWG---EEVFKGKVEAIDSRVQPQSLDI------KIRVSIANI 281

Query: 397 AFSDNNIELRNGFPAEVLFTAKNTTLAQEIIHPI 430
           A      +L+ G  A           A  I+ P+
Sbjct: 282 A-----GKLKPGMLAHAKL---EFPAADFILAPL 307



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 36/106 (33%), Gaps = 4/106 (3%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
                V I S   G + +    +  Q+ QG  L T  D +    ++  +  +K+    ++
Sbjct: 87  VASQSVIIASEVDGRVAEIAANDSQQVQQGDLLFTLIDRQAKAALEEARAFLKDETRKLE 146

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                   L  K  V     ES++  +     + ++       + I
Sbjct: 147 ----EFKQLGEKGGVSNTVRESQQVSVDIAQARVNAAQVNYDYHRI 188


>gi|254189775|ref|ZP_04896284.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|157937452|gb|EDO93122.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
           52237]
          Length = 585

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/326 (10%), Positives = 93/326 (28%), Gaps = 25/326 (7%)

Query: 1   MHHFMWKNLKRNHPASLKRMT-LLSIIGIIGLITWSILLPI--EISVSSSGEILNEDNVV 57
           + H       R  P  L  +    +  G++  + W +L  +   +   SS   +  + V 
Sbjct: 88  VTHDEPVPRGRRAPRPLWTLVPRAAGYGVVFFVIWMVLTIMFPNVFTRSSERAVVNNEVT 147

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD----LIDLKKVSIKNLRCHIDTE 113
            + SP  G++ +  V  G       PL T ++          +  KK+  +        E
Sbjct: 148 LVTSPVEGVVTEQHVTAGKPFDANQPLATVQNPNVDRALLIDLTGKKLDNQQREDAARAE 207

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
            +  +      +   + ++S  ++      +       V    +      +        +
Sbjct: 208 LAGDESQLASTEHDLQRYQSVAQKEHAATIRALEARLAVARAQVDQQEDIVNRNQAMQWA 267

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
             ++          L  L ++       +++       S++ +         +T     +
Sbjct: 268 GAVSEAYTSASRYQLSILSNAKAAAAAELEHAVANGDASRSKV------YASATDGPAAS 321

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           + ++  +L            +F  Y + + + +   Q+                 +  I 
Sbjct: 322 LSQRGRLLGADIAQRKAEIAQFDAYGQSVDKLIAAEQQRL-----------DRLSRIEIR 370

Query: 294 SPIAGTIVYNQSFSSSNYAQQSQPLM 319
           S   G +    +            L+
Sbjct: 371 SGEPGVVEDVLA-PPGTRVAAGATLI 395


>gi|158285521|ref|XP_308355.3| AGAP007523-PB [Anopheles gambiae str. PEST]
 gi|157020032|gb|EAA45415.3| AGAP007523-PB [Anopheles gambiae str. PEST]
          Length = 2003

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 69/210 (32%), Gaps = 13/210 (6%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            L  E ++    +   +  +  +      +  EK  L+   N         E + + L   
Sbjct: 1007 LQLEKVQLDAKLKKMEEDVALIEDQNHKLVKEKKLLEERANDLSQTLAEEEEKAKHLAKL 1066

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              K+ ST ++     +   ++  +      R I     DL+ + +  R  +   Q+ L  
Sbjct: 1067 KVKHESTIAE-LEERLLKDHQQRQEADRSKRKIETEVADLKEQINERRMQIEEMQQQLVK 1125

Query: 202  MKNLFEKNAVSQND-------LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             +    +  V  ++         + +R +     E++E++  +K       +   + N E
Sbjct: 1126 REEELAQTLVRIDEESAAKAAAQKTQRELESQLAEIQEDLEAEKLARSKAEKQKRDLNEE 1185

Query: 255  FANYLKEISRDLE--QNQRTFADEMSKLTI 282
                  E+   L+    Q+    +  +   
Sbjct: 1186 LEALKNELLDSLDTTAAQQELRSKREQEVA 1215



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 79/249 (31%), Gaps = 39/249 (15%)

Query: 82   TPLLTFED-----IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
              L+  ++               +  +  ++  ++ EK A      +   L +  E+ + 
Sbjct: 1132 QTLVRIDEESAAKAAAQKTQRELESQLAEIQEDLEAEKLARSKAEKQKRDLNEELEALKN 1191

Query: 137  QLLDFLGKYHSTC-------------------------------SKVFNYGISSVYRSLK 165
            +LLD L    +                                        ISS+   L+
Sbjct: 1192 ELLDSLDTTAAQQELRSKREQEVATLKKTLEDESANHESTLMDMRHKHAQEISSINEQLE 1251

Query: 166  MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                    +  ++  LE +++ L   L +  +         ++      +L  +   V +
Sbjct: 1252 NLKKMKGGLEKSKQQLEAENADLATELRNVNQSRQENDRRRKQAETQIAELQVKLADVDR 1311

Query: 226  STLELRENIHEQKNMLRHINELYDEANLEFANYLK---EISRDLEQNQRTFADEMSKLTI 282
              +EL++ + + +    +I +  DEA L+ +  +K    +   L + Q+   +E  +   
Sbjct: 1312 VRVELQDKVTKLQQESENITQQLDEAELKASAAIKSAGNLESQLTEAQQLLEEETRQKLA 1371

Query: 283  LEKTREQKT 291
            L     Q  
Sbjct: 1372 LSSKLRQIE 1380



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 23/207 (11%), Positives = 74/207 (35%), Gaps = 6/207 (2%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L   +    + + +L++  +K+ +   + ++S         D+ E+  E R +  ++ + 
Sbjct: 1063 LAKLKVKHESTIAELEERLLKDHQQRQEADRSKRKIETEVADLKEQINERRMQ--IEEMQ 1120

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +      +     +  +      K    ++       L      L A   +  K     +
Sbjct: 1121 QQLVKREEELAQTLVRIDEESAAKAAAQKTQRELESQLAEIQEDLEAEKLARSKAEKQKR 1180

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            +L E+    +N+L         +T   +E   +++  +  + +  ++ +    + L ++ 
Sbjct: 1181 DLNEELEALKNELLD----SLDTTAAQQELRSKREQEVATLKKTLEDESANHESTLMDMR 1236

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQK 290
                Q   +  +++  L  ++   E+ 
Sbjct: 1237 HKHAQEISSINEQLENLKKMKGGLEKS 1263



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 71/206 (34%), Gaps = 15/206 (7%)

Query: 94   DLIDLKKVSIKNLRCHIDTEK----SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              +D  +V +++    +  E       LD    K     K+  + E QL +         
Sbjct: 1307 ADVDRVRVELQDKVTKLQQESENITQQLDEAELKASAAIKSAGNLESQLTEAQQLLEEET 1366

Query: 150  SK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL----RALLSSHQKDLTMMK 203
             +    +  +  +    +    ++      + + E K + L    + +    ++D  + K
Sbjct: 1367 RQKLALSSKLRQIESEKEALQEQLEEDEEAKTNYEKKLAELNFTIQEMKKRSEEDSDIAK 1426

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E       D+   +R +     EL+          + I    ++A +E      ++ 
Sbjct: 1427 ELEESKKKMNKDIETLQRQIQ----ELQAANDRLDKSKKKIQSELEDATIELDTQRTKVL 1482

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQ 289
             +LE+ Q+ F   +++   + +   Q
Sbjct: 1483 -ELEKKQKNFDKVLAEEKAISEQVAQ 1507


>gi|268572101|ref|XP_002641234.1| Hypothetical protein CBG09100 [Caenorhabditis briggsae]
          Length = 1136

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 82/236 (34%), Gaps = 33/236 (13%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             E        + K   ++  R   + EK+    ++ +  +  +      E+  +     
Sbjct: 456 RMEQERIRQEKEEKLREMERRRQLAEAEKARQAEIDRQAAIYAEQERMAMERERELERIQ 515

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD--LTMMK 203
                +            + M+++RMR +   +++ + K+  +R  L + +K   L   +
Sbjct: 516 QEERKREME---RIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKQKILEEER 572

Query: 204 NLFEKNAVSQNDLNQQERIVY---------------------------KSTLELRENIHE 236
               K  + + +  ++E+                              +    LR+   E
Sbjct: 573 QRKIKEQMREMEKIRKEQEEAREIEMRRLEEERAREMERVREEEMERQQQIERLRQQEEE 632

Query: 237 QKNMLRHIN-ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +K     +  E   +A +E     K + ++LE+ ++   +E  K  ILEK  E++ 
Sbjct: 633 RKRKKLEMEKEERKKALIEEERKRKVLEKELEERRQAILEEERKRKILEKEMEERQ 688



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/225 (9%), Positives = 74/225 (32%), Gaps = 22/225 (9%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           N    +   +   +K                     E      +K+   +  +   + E+
Sbjct: 552 NERVRQELEAARKQKIL-------------------EEERQRKIKEQMREMEKIRKEQEE 592

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +    +    +   +  E   E+ ++   +      +        +    + +   +   
Sbjct: 593 AREIEMRRLEEERAREMERVREEEMERQQQIERLRQQEEERKRKKLEMEKEERKKALIEE 652

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
              R  LE +    R  +   ++   +++   E+   +  +  +Q+R   +     ++ +
Sbjct: 653 ERKRKVLEKELEERRQAILEEERKRKILEKEMEERQTAIYE--EQQRRKAEEERRKQKEM 710

Query: 235 HEQKNMLRHINELYDE-ANLEFANYLKEISRDLEQNQRTFADEMS 278
            E+K +   + ++ +E + LE     +E+ R + +N+    +  +
Sbjct: 711 EERKQIQEQMRKVSEERSRLEAMERERELMRQIIENENKQQEFEA 755



 Score = 36.9 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 56/154 (36%), Gaps = 7/154 (4%)

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
            ++   + +  +    EK  + RE +    L +         +   +      +M + R 
Sbjct: 449 QQQDKFERMEQERIRQEKEEKLREMERRRQLAEAEKARQAEIDRQAAIYAEQERMAMERE 508

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
           R +   + + E K  + R        +++ M+ L       Q    + ER+  +     +
Sbjct: 509 RELERIQQE-ERKREMERIRQEEIAMEISRMRELERLQMERQQ---KNERVRQELEAARK 564

Query: 232 ENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           + I E++   R I E   E  +E     +E +R+
Sbjct: 565 QKILEEER-QRKIKEQMRE--MEKIRKEQEEARE 595


>gi|194912418|ref|XP_001982502.1| GG12852 [Drosophila erecta]
 gi|190648178|gb|EDV45471.1| GG12852 [Drosophila erecta]
          Length = 442

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 7/210 (3%)

Query: 86  TFEDIETTDLIDLKK-VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           T E +E     + ++  +I+ LR  +   +S            +K  E  EEQ      +
Sbjct: 58  TLELLEALATKNERENATIQELRDKVAQLESEKLEKAEFRRRFDKELELIEEQWRSETNE 117

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                S + +     V ++  ++ +  +S  L     E+  S+    L     D  +++ 
Sbjct: 118 LVDLVSSLQDENKRLVKQTQDLQSSSAQSSGLGASLTESIISMTNHELHGALSDTQVLQR 177

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------Y 258
           L E+    +++L  +ER +     EL     + + +     +      L  A        
Sbjct: 178 LKEQIYKQRDELKHRERELQDKYSELEHLNIQAERLKASERDTRRRHKLMQAQVKTLCEE 237

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             +    L+   R       +L + EK  E
Sbjct: 238 RADFLAQLQDQSREINQLRKRLGLAEKENE 267


>gi|77166387|ref|YP_344912.1| secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
 gi|254435992|ref|ZP_05049499.1| efflux transporter, RND family, MFP subunit [Nitrosococcus oceani
           AFC27]
 gi|76884701|gb|ABA59382.1| Secretion protein HlyD [Nitrosococcus oceani ATCC 19707]
 gi|207089103|gb|EDZ66375.1| efflux transporter, RND family, MFP subunit [Nitrosococcus oceani
           AFC27]
          Length = 418

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 56/141 (39%), Gaps = 3/141 (2%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE--KSALDFLNNKY 124
           +++ +VE G  + +G  L+  ++ E       ++  +K +   I +E  + A D    K+
Sbjct: 82  VQEVKVEEGELVGRGQLLVQLDEQEVKLEWLQRQADLKEIEAFIASEKVRHAHDLKALKH 141

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN- 183
           +    A   R  +  + L +   T   V +    +  R       R+ +I  ++  L   
Sbjct: 142 EKSLLALSRRAVERAETLEQRKLTPRSVLDEARQAAGRQALELNNRLLAIDDHQARLAQL 201

Query: 184 KSSLLRALLSSHQKDLTMMKN 204
           K+  LRA     Q  L + + 
Sbjct: 202 KARQLRAQALLDQAKLDLERT 222


>gi|325206603|gb|ADZ02056.1| chromosome segregation protein SMC [Neisseria meningitidis
           M04-240196]
          Length = 1161

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 71/200 (35%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E   +          E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENELQVE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|298290450|ref|YP_003692389.1| secretion protein HlyD [Starkeya novella DSM 506]
 gi|296926961|gb|ADH87770.1| secretion protein HlyD family protein [Starkeya novella DSM 506]
          Length = 326

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 85/272 (31%), Gaps = 27/272 (9%)

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           S +  ++++ +        +  Q +             F   +     SL      +   
Sbjct: 41  SDIVVISSQIEGPVSKLAVQNNQTVAANQLLFEIERTPFALKVQEAQASLAQAQANLGLA 100

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
                  +   +  +A+ ++ Q+ L  +K L  +    +  L+   R V  +      N+
Sbjct: 101 QDEVNAAKANIASAQAIQANAQEQLNRIKTLSGEGFSPEAQLDVATRDVATA----GANV 156

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              +  L    +    AN    +   E++R                   E    +  + +
Sbjct: 157 SSTQAQLAVATQRVTVANAAIGSTQAELAR------------------AEYDLSKTVVAA 198

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P AG I    +    +Y +    ++ I+   +   + A +  + ++ ++ G    +    
Sbjct: 199 PEAGRITPFTTR-LGDYLRPGTEVLAII-TDRRRRVVANMNERHLERIRIGQRVLLTL-- 254

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
             +   +     +  I   +++  +N +   Y
Sbjct: 255 -GNDPWQLHLGRVSGIAAGVARSPHNPEIVPY 285



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 68/218 (31%), Gaps = 5/218 (2%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              ++V I S   G + K  V+N   +     L   E       +   + S+   + ++ 
Sbjct: 39  VMSDIVVISSQIEGPVSKLAVQNNQTVAANQLLFEIERTPFALKVQEAQASLAQAQANLG 98

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
             +  ++         +    + +EQL     K  S         +    R +      +
Sbjct: 99  LAQDEVNAAKANIASAQAIQANAQEQL--NRIKTLSGEGFSPEAQLDVATRDVATAGANV 156

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELR 231
            S          + ++  A + S Q +L   +    K  V+  +  +      +    LR
Sbjct: 157 SSTQAQLAVATQRVTVANAAIGSTQAELARAEYDLSKTVVAAPEAGRITPFTTRLGDYLR 216

Query: 232 ---ENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              E +    +  R +    +E +LE     + +   L
Sbjct: 217 PGTEVLAIITDRRRRVVANMNERHLERIRIGQRVLLTL 254


>gi|294669167|ref|ZP_06734248.1| multidrug efflux periplasmic linker protein BpeA [Neisseria
           elongata subsp. glycolytica ATCC 29315]
 gi|291308911|gb|EFE50154.1| multidrug efflux periplasmic linker protein BpeA [Neisseria
           elongata subsp. glycolytica ATCC 29315]
          Length = 446

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 66/172 (38%), Gaps = 4/172 (2%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           ++    GI+K+   + GS + +G PL   ED      ++  +  + +    +   K+  D
Sbjct: 81  VRPQVGGIVKRRLFQEGSYVREGQPLYQLEDATYVASLESARAQLASAEATLA--KANAD 138

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK-MKLTRMRSIYLN 177
               +  V   A   +E        +      K     I S   ++   ++T   S ++ 
Sbjct: 139 LARYRPLVEADAISKQEYDAAVTGKRSAEAGVKAARAAIKSAQINVNYSRITAPISGFIG 198

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           + ++ ++ +L+ A  ++   ++     ++     S  ++ +  + +    L+
Sbjct: 199 QSNV-SEGALVSANSTTAMANIKQTDPMYANVTQSATEIMKLRQQIADGRLK 249



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 75/251 (29%), Gaps = 17/251 (6%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKN-AVSQND-LNQQERIVYKSTLE-LRENIH 235
           ++L  +   +R+     Q    + + LF++   V +   L Q E   Y ++LE  R  + 
Sbjct: 67  VELPGRLEAVRSADVRPQVGGIVKRRLFQEGSYVREGQPLYQLEDATYVASLESARAQLA 126

Query: 236 EQKNMLRHINELYD------EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
             +  L   N          EA+                 +       + +   +     
Sbjct: 127 SAEATLAKANADLARYRPLVEADAISKQEYDAAVTGKRSAEAGVKAARAAIKSAQINVNY 186

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQ-SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
             I +PI+G I    + S        S   M  +  +   Y     +  +I  +++   A
Sbjct: 187 SRITAPISGFI-GQSNVSEGALVSANSTTAMANIKQTDPMYANVTQSATEIMKLRQ-QIA 244

Query: 349 TVRFPHYADIREKKFKAIIEKIDP-----IISQQDNNLQTQEYYEVILKITDLAFSDNNI 403
             R        E   K     + P     + +    N  T +    ++          N+
Sbjct: 245 DGRLKAVDGRIEVDIKLEDGTVYPQKGFLMFADTTVNETTGQVKLRVVVPNPQNVLMPNL 304

Query: 404 ELRNGFPAEVL 414
            +R      V+
Sbjct: 305 YVRAVMSQSVV 315


>gi|254804429|ref|YP_003082650.1| chromosome segregation protein [Neisseria meningitidis alpha14]
 gi|254667971|emb|CBA04250.1| chromosome segregation protein [Neisseria meningitidis alpha14]
          Length = 1161

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 71/200 (35%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E   +          E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENELQVE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|224071960|ref|XP_002199516.1| PREDICTED: citron (rho-interacting, serine/threonine kinase 21)
           [Taeniopygia guttata]
          Length = 2032

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 81/217 (37%), Gaps = 16/217 (7%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L   E+    DL D  K +++N+    + E      +  +   +  A +S+   L   + 
Sbjct: 725 LKVLENQMKKDLAD--KEALENMLRRHEEEAREKCKVLAEQKAMINAMDSKIRSLEQRIV 782

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +         N  + +  R++K +   +  +   +  LE ++  L A     ++ L   +
Sbjct: 783 ELSEANKLAANSSLFT-QRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQL---E 838

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
            +  ++   +N L + E  + + +LE  E   E K  L  +     E   +         
Sbjct: 839 KMSHQDHTDKNRLLELETRLREVSLEHEEQKLELKRQLTELQLTLQERESQITGLQAART 898

Query: 256 --ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              N L+E   +LE+      +E+  LT      ++K
Sbjct: 899 ALENQLREAKTELEETTAEAEEEIQALTAHRDEIQRK 935



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 74/207 (35%), Gaps = 3/207 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESREEQLLDFL 142
              +     D +  K+   +  R  +  EKS  +    +   +   EK    R +Q +   
Sbjct: 1026 VMDLEALNDELLEKERQWEAWRNVLGDEKSQFECRVRELQRMLDTEKQSRVRADQRITES 1085

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +      K     I ++ ++LK +  +  S+     DLE K ++L     S Q+ L   
Sbjct: 1086 RQVVELAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQKLETE 1145

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            + L ++    Q  L QQ  +       L + + E  +    +     +   +  N     
Sbjct: 1146 RELKQRLLEEQAKLQQQMDLQKNHIFRLTQGLQEALDRADLLKTERSDLEYQLENIQVLY 1205

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQ 289
            S +  + + T + +   +  L+   +Q
Sbjct: 1206 SHEKVKMEGTISQQTKLIDFLQAKMDQ 1232



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 78/231 (33%), Gaps = 22/231 (9%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA- 130
           V++  +   G      E I T     ++++  K  +  +     A + L N     E+A 
Sbjct: 612 VKDQGKNEAGELYSKLEKINTEQQAKIQELQEKLTKA-VKASSEATELLQNIRQAKERAE 670

Query: 131 -----FESREEQLLDFLGKYHSTCSKVFNYGISSVYRS-LKMKLTRMRSIYLNRL----- 179
                 ++RE+       K          +  + +    L+++L +    Y  +L     
Sbjct: 671 KELEKLQNREDSNESMKKKLLEAEELEEKHREAQIAAQHLELQLKQKEQFYEEKLKVLEN 730

Query: 180 ----DLENKSSLLRALLSSHQKDLTMMKNLFEKNAV-----SQNDLNQQERIVYKSTLEL 230
               DL +K +L   L    ++     K L E+ A+     S+    +Q  +      +L
Sbjct: 731 QMKKDLADKEALENMLRRHEEEAREKCKVLAEQKAMINAMDSKIRSLEQRIVELSEANKL 790

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             N            E       +   YL+  +  LE   R   +++ K++
Sbjct: 791 AANSSLFTQRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQLEKMS 841



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 72/247 (29%), Gaps = 40/247 (16%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-----------LDFLNNKYDVLEKAFES 133
            L     E    I   + +   L   +   K+            +  L    D +++ FE+
Sbjct: 879  LQLTLQERESQITGLQAARTALENQLREAKTELEETTAEAEEEIQALTAHRDEIQRKFEA 938

Query: 134  REE------QLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                      L + L +     +++ N    +S            +  +      L  + 
Sbjct: 939  LRNSCTVISDLEEQLNQLTEDNAELNNQNFFLSKQLDEASGANDEVVQLRSEVDHLRREI 998

Query: 186  SLLRALLSSHQKDLTMMKN---LFEKNAVSQN----DLNQQERIVYK------------- 225
            +     L+S ++ +  +K    + E+  +       +L ++ER                 
Sbjct: 999  TEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDELLEKERQWEAWRNVLGDEKSQFE 1058

Query: 226  -STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                EL+  +  +K      ++   E+       +KE   ++   Q+   ++  K   L 
Sbjct: 1059 CRVRELQRMLDTEKQSRVRADQRITESRQVVELAVKEHKAEILALQQALKEQKLKAESLS 1118

Query: 285  KTREQKT 291
                   
Sbjct: 1119 DKLNDLE 1125


>gi|224026807|ref|ZP_03645173.1| hypothetical protein BACCOPRO_03564 [Bacteroides coprophilus DSM
           18228]
 gi|224020043|gb|EEF78041.1| hypothetical protein BACCOPRO_03564 [Bacteroides coprophilus DSM
           18228]
          Length = 374

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 73/191 (38%), Gaps = 4/191 (2%)

Query: 50  ILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCH 109
           ++N    VEI+   SG I +  ++ G+++ +G  L+  + +     +     ++KN    
Sbjct: 52  VINGRQSVEIRPQVSGTITQICIDEGAKVKKGQTLVIIDQVPYEAALQTAVANVKNAEAA 111

Query: 110 IDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
           + T +      + L  ++ V +   ++    L           +   N   +  Y  +K 
Sbjct: 112 VATARLMAESKEELFKEHVVSDFDLQTARNSLFQAEATLAQAKADEINARNNLSYTEVKS 171

Query: 167 KLTRMRSIYLNRLDLENKSSLLRALLS-SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
            +  +  +   R+     +S+   L + S  +++ +  ++ E   +S    N+      K
Sbjct: 172 PVDGVSGMLPYRVGALVDASISTPLTTVSDDEEMYVYFSMTESQILSLIRANKTLEEALK 231

Query: 226 STLELRENIHE 236
              E+   + +
Sbjct: 232 QMPEVGLQLSD 242


>gi|195107409|ref|XP_001998306.1| GI23889 [Drosophila mojavensis]
 gi|193914900|gb|EDW13767.1| GI23889 [Drosophila mojavensis]
          Length = 692

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 73/206 (35%), Gaps = 1/206 (0%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
             +   I         L+  I T  ++L  L+ +   +E +F++ ++QL   + +     
Sbjct: 82  TASGSDIAGGNEEKGQLQTQIITLMNSLATLSAEKSRMEASFQADKKQLRAQIAQKEQII 141

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            ++         R+            + R + E +++    +L   QK     ++L E  
Sbjct: 142 QELHAKAKEQAQRAKNEVDEVKAKWIIERQEREKETNNQMIMLRELQKLYADERHLKENI 201

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY-LKEISRDLEQ 268
            +  N+   Q          LRE   + K     + +   +A    A     + +  L+Q
Sbjct: 202 EMQLNNFKTQFASNEAENSRLRELQLQLKEARAQLKQFQTKAEQTTAAVSATDSNVLLQQ 261

Query: 269 NQRTFADEMSKLTILEKTREQKTILS 294
            ++       + ++  K  +++ + +
Sbjct: 262 VRQEMQQLKEQHSVAIKQEQRRVLRA 287


>gi|167851416|ref|ZP_02476924.1| multidrug resistance secretion protein [Burkholderia pseudomallei
           B7210]
          Length = 459

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 4/152 (2%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           R      +   E +   K+ L +       A  +        S    +         ++ 
Sbjct: 215 RAGASVEVVAPEELARAKSSLANAQAALAGAQAQREAARALGSERPVEQNPAVQQAAAQF 274

Query: 281 TILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQ 340
            +  +  ++ TI+SP+ GT+   +S           PLM +V   +  ++ A     Q++
Sbjct: 275 KLAYRNLKRTTIVSPVDGTV-GQRSVQIGQQVGPGGPLMSVV-QLRQVWVEANFKEGQLR 332

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
           H++ G    +    Y       +   +E    
Sbjct: 333 HMRVGQPVRLESDLYGARVT--YHGRVEGFSA 362



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 68/214 (31%), Gaps = 15/214 (7%)

Query: 18  KRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQ 77
               +L+I+ +   + W I+           +     NVV+I +   G +    V +  Q
Sbjct: 95  WFFGVLAIVALGAALYWFIVGRFSEETD---DAYVAGNVVQIAAQIQGTVTDVLVADTQQ 151

Query: 78  ILQGTPLLTFEDIETTDLIDLKKV-------SIKNLRCHIDTEKSALDFLNNKYDVLEKA 130
           +  G  L+  +D E        +         + N R  + T +  +        + ++A
Sbjct: 152 VKAGQALVRLDDAEAAAAFAQAQAQLAQAVRQVANTRLSMQTYEQTVKAREADLKLAQQA 211

Query: 131 FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
           + +R    ++ +        ++     S       +   + +      L  E       A
Sbjct: 212 YRARAGASVEVVA-----PEELARAKSSLANAQAALAGAQAQREAARALGSERPVEQNPA 266

Query: 191 LLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
           +  +  +     +NL     VS  D    +R V 
Sbjct: 267 VQQAAAQFKLAYRNLKRTTIVSPVDGTVGQRSVQ 300


>gi|170019599|ref|YP_001724553.1| multidrug efflux system subunit MdtA [Escherichia coli ATCC 8739]
 gi|169754527|gb|ACA77226.1| efflux transporter, RND family, MFP subunit [Escherichia coli ATCC
           8739]
          Length = 455

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 104 AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLIALHFQEGQQVKAGDLLAEIDPS 161

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 162 QFKVALAQAQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 217

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ +    R+ L+ 
Sbjct: 218 TIKADEASVASAQLQLDWSRITAPVDGRVGLKQ 250



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 162 QFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 221

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 222 DEASVASAQLQLD 234


>gi|153212105|ref|ZP_01947922.1| HlyD family secretion protein [Vibrio cholerae 1587]
 gi|124116901|gb|EAY35721.1| HlyD family secretion protein [Vibrio cholerae 1587]
          Length = 364

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 54/167 (32%), Gaps = 4/167 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L + +  +    ++  ++ +KN        K+  +     
Sbjct: 77  SGRLTDIAVKEGDQVKKGQLLASLDSRDAKTALEAAQLELKNTEQEYRRAKAIFEKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ +   K   T       G  S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEEAKRKLEYTQITAPFDGAISEKTIENFAQVQANQVIMILQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKS 226
           DL +    +          +   + + E +A+     + + R     
Sbjct: 197 DLNDLEVAIEIPHRVMLSGVRNTRAIAELSAIPNQQFDLKLRTYSTQ 243


>gi|115377585|ref|ZP_01464782.1| membrane-fusion protein [Stigmatella aurantiaca DW4/3-1]
 gi|310820425|ref|YP_003952783.1| secretion family protein HlyD [Stigmatella aurantiaca DW4/3-1]
 gi|115365386|gb|EAU64424.1| membrane-fusion protein [Stigmatella aurantiaca DW4/3-1]
 gi|309393497|gb|ADO70956.1| Secretion protein [Stigmatella aurantiaca DW4/3-1]
          Length = 388

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 48/128 (37%), Gaps = 3/128 (2%)

Query: 51  LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +     V ++S   G +++     G  + +G PL   +     + +   + ++   +  +
Sbjct: 55  VVAFQTVTVRSLVDGQLREVFFREGQAVRRGDPLAQIDPRPFLNQLHQAEAALARDKALL 114

Query: 111 DTEKSALD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
            T +  L+    L  +  + ++  +++   +       H+  + V +  ++  Y  +   
Sbjct: 115 ATNRRDLERYQALAQRKLISQQQADNQSGLVEQGAATVHADQAAVDSARLNLTYARIVSP 174

Query: 168 LTRMRSIY 175
           +  +  I 
Sbjct: 175 IDGITGIR 182


>gi|92116546|ref|YP_576275.1| hypothetical protein Nham_0963 [Nitrobacter hamburgensis X14]
 gi|91799440|gb|ABE61815.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 307

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 41/126 (32%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           S+  P   +V+ +G +      + I +P SG++     + GS +  G  L   +D E T 
Sbjct: 38  SVESPFTSNVAGTGIVEASTENIAIGTPVSGVVASVLAKPGSHVRAGEALFRIDDRELTA 97

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            +      +      +  +K  LD           A    E +   F+            
Sbjct: 98  QLLPATAQVGEAEATLARDKDILDRGEALSKANRDAITVEELRRRRFVVAIDQAALDRTK 157

Query: 155 YGISSV 160
             +  +
Sbjct: 158 ADVERL 163


>gi|26992062|ref|NP_747487.1| CzcB family heavy metal RND efflux membrane fusion protein
           [Pseudomonas putida KT2440]
 gi|24987201|gb|AAN70951.1|AE016739_4 heavy metal RND efflux membrane fusion protein, CzcB family
           [Pseudomonas putida KT2440]
          Length = 490

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 43/145 (29%), Gaps = 16/145 (11%)

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
           + + ++    K + Q T+++P AG I                 L +I       ++ A V
Sbjct: 194 ELVDRVARSGKVQNQVTLVAPSAGVIQALDLR-PGMTVTPGATLARIN-GIANVWLEAAV 251

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
              Q   + +G       P Y        +  +  +      Q   L+            
Sbjct: 252 PEAQASGLHEGQAVEAHLPAYPGET---VQGKLTALLADADLQSRTLRL----------- 297

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKN 419
            +   + +  LR G  A+V      
Sbjct: 298 RIELPNKDGRLRPGMTAQVSLRPGE 322


>gi|157738611|ref|NP_061925.2| coiled-coil alpha-helical rod protein 1 isoform 3 [Homo sapiens]
 gi|42558938|sp|Q8TD31|CCHCR_HUMAN RecName: Full=Coiled-coil alpha-helical rod protein 1; AltName:
           Full=Alpha-helical coiled-coil rod protein; AltName:
           Full=Putative gene 8 protein; Short=Pg8
 gi|55962043|emb|CAI18328.1| coiled-coil alpha-helical rod protein 1 [Homo sapiens]
 gi|56206480|emb|CAI18483.1| coiled-coil alpha-helical rod protein 1 [Homo sapiens]
          Length = 782

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 79/204 (38%), Gaps = 5/204 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + L+   ++  R  +D E      L  +     +     E Q L  + +      +   
Sbjct: 500 DVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQ 559

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAVS 212
             ++S+   L++     +        L  + +  + L   +  +K   +   L E+ + +
Sbjct: 560 ESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDT 619

Query: 213 QNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +  LN+  R   K+ + LR+      ++K   + +  L +EA  E    L    ++LE++
Sbjct: 620 ERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERD 679

Query: 270 QRTFADEMSKLTILEKTREQKTIL 293
           +      + +  +L + ++Q+ + 
Sbjct: 680 KNLMLATLQQEGLLSRYKQQRLLT 703



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E ++  L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 85  QALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEA- 143

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+   SQ +L + +R+  +    L +   E  + L    E  
Sbjct: 144 -EGLRAALAGAEVVRKNLEEG--SQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGL 200

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 201 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 243



 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 69/218 (31%), Gaps = 10/218 (4%)

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V    ++ +    +      +       +     L      EK+           L
Sbjct: 91  AEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAAL 150

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSV----YRSLKMKLTRMRSIYLNRLDLEN 183
             A   R + L +   +      ++    +SS+      +L    ++   +  +   LE 
Sbjct: 151 AGAEVVR-KNLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLET 209

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +     L+  Q++  +++    K   +Q DL  Q  +V      + E +  +  +   
Sbjct: 210 RRAGEAKELAEAQREAELLRKQLSK---TQEDLEAQVTLVENLRKYVGEQVPSE--VHSQ 264

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             EL  +  LE   +L+E    L          +  LT
Sbjct: 265 TWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLT 302


>gi|297462730|ref|XP_001788808.2| PREDICTED: Fas (TNFRSF6) binding factor 1 [Bos taurus]
 gi|297487416|ref|XP_002696252.1| PREDICTED: Fas (TNFRSF6) binding factor 1 [Bos taurus]
 gi|296476051|gb|DAA18166.1| Fas (TNFRSF6) binding factor 1 [Bos taurus]
          Length = 1190

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 13/206 (6%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +   +    +++   +++++K   + L+  +   K              ++     EQ+
Sbjct: 744 EKDQEMERLRELQRASILEMRKDHEEQLQ-RLKLLKDREIDAVTSATSHTRSLNGIIEQM 802

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
             F    H   S++    +SS          + + +   +  L  +   +    S  Q+ 
Sbjct: 803 ETFSSSLHELSSRLEASHLSSSQERELGIRQQDKQLQALQERLSQQQRDMEEERSRLQEV 862

Query: 199 LTMMKNLFEKNAVSQNDLNQQER-----IVYKSTLELRENIHEQKNMLRHI---NELYDE 250
           +  M+    +    Q+ L +QER        K+    R    ++K M++ I    E  + 
Sbjct: 863 IGKMEARLGE----QSRLLEQERWRVHAEQSKAEAAQRALEEQRKVMVQQIAMEREELER 918

Query: 251 ANLEFANYLKEISRDLEQNQRTFADE 276
           A        K +     + +R  A E
Sbjct: 919 AKSALLEEQKSVMHKCGEERRRLAAE 944


>gi|255320337|ref|ZP_05361521.1| membrane-fusion protein [Acinetobacter radioresistens SK82]
 gi|262379378|ref|ZP_06072534.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
 gi|255302532|gb|EET81765.1| membrane-fusion protein [Acinetobacter radioresistens SK82]
 gi|262298835|gb|EEY86748.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
          Length = 376

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 8/197 (4%)

Query: 29  IGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE 88
           I    W    P +I +   G +  E   V  K P    I++  V  G ++ +  PL+   
Sbjct: 68  IAFGLWKSYQPQDIEI--QGRVEAETIYVSTKVPS--RIEEIYVREGQKVNKNQPLVRLF 123

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
             E          ++++      T +      N             +EQL     K    
Sbjct: 124 SPEVDAKKQQALAALQSALALQSTAERGSQEENIATLYANWQSVKAQEQLARTTYKRGEN 183

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              ++  G+ S  R  ++   ++ +  L     +  +   R      +       ++  K
Sbjct: 184 ---LYKEGVISRQRRDELYAAQVSAQELTEAAYQQYARAKRGSTEQQRSSADAQVDIA-K 239

Query: 209 NAVSQNDLNQQERIVYK 225
            AVS+ +  + E  +Y 
Sbjct: 240 AAVSEAEALEAETKLYA 256



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 28/243 (11%), Positives = 70/243 (28%), Gaps = 22/243 (9%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               S   N   L      ++A     +      +NL+++  +S+               
Sbjct: 148 AERGSQEENIATLYANWQSVKAQEQLARTTYKRGENLYKEGVISRQR------------- 194

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             R+ ++  +   + + E   +          E  R     Q   A   + ++  E    
Sbjct: 195 --RDELYAAQVSAQELTEAAYQQYARAKRGSTEQQRSSADAQVDIA--KAAVSEAEALEA 250

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           +  + +P++GT+        S       P++ ++      ++   +   Q   + K    
Sbjct: 251 ETKLYAPVSGTVSK-TYGKPSELVAIGVPVVSLI-QDDSLWVSLNIREDQYTQIYKAQKL 308

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
               P          + I  + +    +          Y++      L  +  N +L+ G
Sbjct: 309 EGFIPALNRRATFNIENIDAEGEFATIKTTRQTGG---YDIRSFKVHLTPAQQNPDLKVG 365

Query: 409 FPA 411
              
Sbjct: 366 MSV 368


>gi|198284103|ref|YP_002220424.1| RND family efflux transporter MFP subunit [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218665407|ref|YP_002426757.1| efflux transporter, RND family, MFP subunit [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198248624|gb|ACH84217.1| efflux transporter, RND family, MFP subunit [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218517620|gb|ACK78206.1| efflux transporter, RND family, MFP subunit [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 360

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 37/122 (30%), Gaps = 3/122 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
               G ++    V  + S  SG I    V +G  +  G  L   +  +    +   +  +
Sbjct: 53  ARVPGTVVAHQQVQ-LSSRLSGYIHSMSVRDGQSVRAGQLLFEVDPTDVVGQVQQAQAGL 111

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
              +  +   +S  +    K    +KA   ++   +                G+ +    
Sbjct: 112 AEAQAALTDARSNYE--RFKVLYAQKAIPKQQWDQVKSAYGMAQARVAAARGGVGTAQSQ 169

Query: 164 LK 165
           L+
Sbjct: 170 LR 171



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 85/267 (31%), Gaps = 17/267 (6%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
             +     GK  +   ++ N G+++  R     +   +    +RL     S  +R   S 
Sbjct: 27  PPEAPLAQGKVSAPVLQIRNQGMAAYARVPGTVVAHQQVQLSSRLSGYIHSMSVRDGQSV 86

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
               L     LFE   V   D+  Q +       E +  + + ++       LY +  + 
Sbjct: 87  RAGQL-----LFE---VDPTDVVGQVQQAQAGLAEAQAALTDARSNYERFKVLYAQKAIP 138

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
              +  ++       Q   A     +   +       + +P +G I   +   + + A  
Sbjct: 139 KQQW-DQVKSAYGMAQARVAAARGGVGTAQSQLRYARVTAPFSGIITR-KFLQNGDLASP 196

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATV-----RFPHYADIREKKFKA-IIE 368
            QP++ +   +    ++  V+      ++ G    V     R P           A    
Sbjct: 197 GQPILALA-DTSRLEVQCSVSGTLYHSLQIGQKIAVLVDGKRVPATVLDLVGAADAMTHA 255

Query: 369 KIDPIISQQDNNLQTQEYYEVILKITD 395
               +    D+ LQ  +Y  V + +T 
Sbjct: 256 HTVKLSLPADSTLQAGDYVSVEVPVTQ 282


>gi|158285519|ref|XP_001687903.1| AGAP007523-PA [Anopheles gambiae str. PEST]
 gi|157020031|gb|EDO64552.1| AGAP007523-PA [Anopheles gambiae str. PEST]
          Length = 1974

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 69/210 (32%), Gaps = 13/210 (6%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCH---IDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            L  E ++    +   +  +  +      +  EK  L+   N         E + + L   
Sbjct: 1007 LQLEKVQLDAKLKKMEEDVALIEDQNHKLVKEKKLLEERANDLSQTLAEEEEKAKHLAKL 1066

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
              K+ ST ++     +   ++  +      R I     DL+ + +  R  +   Q+ L  
Sbjct: 1067 KVKHESTIAE-LEERLLKDHQQRQEADRSKRKIETEVADLKEQINERRMQIEEMQQQLVK 1125

Query: 202  MKNLFEKNAVSQND-------LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             +    +  V  ++         + +R +     E++E++  +K       +   + N E
Sbjct: 1126 REEELAQTLVRIDEESAAKAAAQKTQRELESQLAEIQEDLEAEKLARSKAEKQKRDLNEE 1185

Query: 255  FANYLKEISRDLE--QNQRTFADEMSKLTI 282
                  E+   L+    Q+    +  +   
Sbjct: 1186 LEALKNELLDSLDTTAAQQELRSKREQEVA 1215



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 79/249 (31%), Gaps = 39/249 (15%)

Query: 82   TPLLTFED-----IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
              L+  ++               +  +  ++  ++ EK A      +   L +  E+ + 
Sbjct: 1132 QTLVRIDEESAAKAAAQKTQRELESQLAEIQEDLEAEKLARSKAEKQKRDLNEELEALKN 1191

Query: 137  QLLDFLGKYHSTC-------------------------------SKVFNYGISSVYRSLK 165
            +LLD L    +                                        ISS+   L+
Sbjct: 1192 ELLDSLDTTAAQQELRSKREQEVATLKKTLEDESANHESTLMDMRHKHAQEISSINEQLE 1251

Query: 166  MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                    +  ++  LE +++ L   L +  +         ++      +L  +   V +
Sbjct: 1252 NLKKMKGGLEKSKQQLEAENADLATELRNVNQSRQENDRRRKQAETQIAELQVKLADVDR 1311

Query: 226  STLELRENIHEQKNMLRHINELYDEANLEFANYLK---EISRDLEQNQRTFADEMSKLTI 282
              +EL++ + + +    +I +  DEA L+ +  +K    +   L + Q+   +E  +   
Sbjct: 1312 VRVELQDKVTKLQQESENITQQLDEAELKASAAIKSAGNLESQLTEAQQLLEEETRQKLA 1371

Query: 283  LEKTREQKT 291
            L     Q  
Sbjct: 1372 LSSKLRQIE 1380



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 23/207 (11%), Positives = 74/207 (35%), Gaps = 6/207 (2%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L   +    + + +L++  +K+ +   + ++S         D+ E+  E R +  ++ + 
Sbjct: 1063 LAKLKVKHESTIAELEERLLKDHQQRQEADRSKRKIETEVADLKEQINERRMQ--IEEMQ 1120

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            +      +     +  +      K    ++       L      L A   +  K     +
Sbjct: 1121 QQLVKREEELAQTLVRIDEESAAKAAAQKTQRELESQLAEIQEDLEAEKLARSKAEKQKR 1180

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            +L E+    +N+L         +T   +E   +++  +  + +  ++ +    + L ++ 
Sbjct: 1181 DLNEELEALKNELLD----SLDTTAAQQELRSKREQEVATLKKTLEDESANHESTLMDMR 1236

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQK 290
                Q   +  +++  L  ++   E+ 
Sbjct: 1237 HKHAQEISSINEQLENLKKMKGGLEKS 1263



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 71/206 (34%), Gaps = 15/206 (7%)

Query: 94   DLIDLKKVSIKNLRCHIDTEK----SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
              +D  +V +++    +  E       LD    K     K+  + E QL +         
Sbjct: 1307 ADVDRVRVELQDKVTKLQQESENITQQLDEAELKASAAIKSAGNLESQLTEAQQLLEEET 1366

Query: 150  SK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL----RALLSSHQKDLTMMK 203
             +    +  +  +    +    ++      + + E K + L    + +    ++D  + K
Sbjct: 1367 RQKLALSSKLRQIESEKEALQEQLEEDEEAKTNYEKKLAELNFTIQEMKKRSEEDSDIAK 1426

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L E       D+   +R +     EL+          + I    ++A +E      ++ 
Sbjct: 1427 ELEESKKKMNKDIETLQRQIQ----ELQAANDRLDKSKKKIQSELEDATIELDTQRTKVL 1482

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQ 289
             +LE+ Q+ F   +++   + +   Q
Sbjct: 1483 -ELEKKQKNFDKVLAEEKAISEQVAQ 1507


>gi|149910804|ref|ZP_01899438.1| membrane-fusion protein [Moritella sp. PE36]
 gi|149806138|gb|EDM66118.1| membrane-fusion protein [Moritella sp. PE36]
          Length = 345

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 24/191 (12%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEI--SRDLEQNQRTFADEMSKLTILEKTREQK 290
                K+    +N    +     A Y K       L++++ +++  ++ +   + T  ++
Sbjct: 105 ERANLKSSQAKLNAAKSKFLRYEALYKKNAVSKEALDESEASYSSLLADIESQKATIARR 164

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKKGYTA 348
            I +P  G I   ++     Y         IV     + +R +  V   QI  V  G   
Sbjct: 165 QISAPFDGEI-GLRNVFLGEYLSAGT---SIVRLEDTSVMRLRFTVPQTQISKVYLGQEV 220

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
            +    Y +     F   I  I+P ++           Y+  L        +N  +LR+G
Sbjct: 221 EIFVDAYPET---AFNGKISAIEPAVN-----------YQSGLIQIQADIPNNESQLRSG 266

Query: 409 F--PAEVLFTA 417
               A V+   
Sbjct: 267 MFARANVILPT 277



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 1/138 (0%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G I     V  I +  +G I     ++G+++ +G  L++ +       +   +  +  
Sbjct: 60  AIGFIEPNQGV-NIANEVAGKIDSITFDSGTKVTKGQLLVSLDSDVERANLKSSQAKLNA 118

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +      ++         + L+++  S    L D   +  +   +  +           
Sbjct: 119 AKSKFLRYEALYKKNAVSKEALDESEASYSSLLADIESQKATIARRQISAPFDGEIGLRN 178

Query: 166 MKLTRMRSIYLNRLDLEN 183
           + L    S   + + LE+
Sbjct: 179 VFLGEYLSAGTSIVRLED 196


>gi|91203029|emb|CAJ72668.1| similar to multicomponent efflux pump (periplasmic accessory
           protein subunit, RND type ABC transporters) [Candidatus
           Kuenenia stuttgartiensis]
          Length = 385

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 70/226 (30%), Gaps = 41/226 (18%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANL----------EF 255
           E+  VS+ D   Q +++    +E LR  + + +  L        E             + 
Sbjct: 75  EQVLVSRGDTVLQGQVLAVLDMEPLRLAVEQARAQLNIARAKVTETKQIYDRTVTLFNKR 134

Query: 256 ANYLKEISRDLE---QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS-----FS 307
           A+   E+          +       S L   ++      + +P AGTI           +
Sbjct: 135 ASSQAEVDTATANHAAARGNLKAAQSDLDRKQRDLSNAELTAPFAGTIAERNIDPFQETT 194

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
                     L++    S    +  ++    I+ +  G    V F           +   
Sbjct: 195 VGQ----GAFLLQ---SSDALEVGVRIPETMIRDIDYGQRVQVTF--------PTIQGT- 238

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEV 413
             +  ++S+  + +     + V ++++      +  +L  G  A V
Sbjct: 239 -SLTGVVSEIGSRVGAGNAFPVKIQLSA-----SQTKLLPGMTASV 278



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 9/101 (8%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I++  V  G  +LQG  L   +       ++  +++++  R  ++  ++ +      
Sbjct: 71  SGTIEQVLVSRGDTVLQGQVLAVLD-------MEPLRLAVEQARAQLNIARAKVTETKQI 123

Query: 124 YDVLEKAFESRE--EQLLDFLGKYHSTCSKVFNYGISSVYR 162
           YD     F  R   +  +D     H+          S + R
Sbjct: 124 YDRTVTLFNKRASSQAEVDTATANHAAARGNLKAAQSDLDR 164


>gi|7020135|dbj|BAA91007.1| unnamed protein product [Homo sapiens]
 gi|39979303|dbj|BAD05130.1| StAR protein binding protein [Homo sapiens]
 gi|39979305|dbj|BAD05131.1| StAR protein binding protein 1b [Homo sapiens]
          Length = 782

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 79/206 (38%), Gaps = 5/206 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              + L+   ++  R  +D E      L  +     +     E Q L  + +      + 
Sbjct: 498 ATDVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQ 557

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNA 210
               ++S+   L++     +        L  + +  + L   +  +K   +   L E+ +
Sbjct: 558 TQESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLS 617

Query: 211 VSQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            ++  LN+  R   K+ + LR+      ++K   + +  L +EA  E    L    ++LE
Sbjct: 618 DTERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELE 677

Query: 268 QNQRTFADEMSKLTILEKTREQKTIL 293
           +++      + +  +L + ++Q+ + 
Sbjct: 678 RDKNLMLATLQQEGLLSRYKQQRLLT 703



 Score = 40.8 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E ++  L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 85  QALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEA- 143

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+   SQ +L + +R+  +    L +   E  + L    E  
Sbjct: 144 -EGLRAALAGAEVVRKNLEEG--SQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGL 200

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 201 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 243



 Score = 36.1 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 69/218 (31%), Gaps = 10/218 (4%)

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V    ++ +    +      +       +     L      EK+           L
Sbjct: 91  AEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAAL 150

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSV----YRSLKMKLTRMRSIYLNRLDLEN 183
             A   R + L +   +      ++    +SS+      +L    ++   +  +   LE 
Sbjct: 151 AGAEVVR-KNLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLET 209

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +     L+  Q++  +++    K   +Q DL  Q  +V      + E +  +  +   
Sbjct: 210 RRAGEAKELAEAQREAELLRKQLSK---TQEDLEAQVTLVENLRKYVGEQVPSE--VHSQ 264

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             EL  +  LE   +L+E    L          +  LT
Sbjct: 265 TWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLT 302


>gi|50838836|ref|NP_001001302.1| myosin-7 [Gallus gallus]
 gi|14017756|dbj|BAB47399.1| chick atrial myosin heavy chain [Gallus gallus]
          Length = 1931

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 73/214 (34%), Gaps = 11/214 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   L+  +D   S  + L      LEK   + E+Q+ +   K 
Sbjct: 1201 QLDNLQRVKQKLEKEKS--ELKLELDDVNSNTEQLIKAKTNLEKMCRTTEDQMNEHRSKL 1258

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  V              S + R L+ K   +  +   +L    +   L+  L    
Sbjct: 1259 EEAQRTVTDLSTQRAKLQTENSELSRQLEEKEAFINQLTRGKLTYTQQLEDLKRQLEEEA 1318

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1319 KAKNALAHALQSAQHDCDLLREQYEEEMEAKAELQRALSKANSEVAQWRTKYETDAIQRT 1378

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              L+E  + L Q  +   + +  +     + E+ 
Sbjct: 1379 EELEEAKKKLAQRLQEAEEAVEAVNAKCSSLEKT 1412



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 72/184 (39%), Gaps = 5/184 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                    + +   L+  I+   + ++  N     L+K   + ++ L ++  K+  + ++
Sbjct: 1402 VNAKCSSLEKTKHRLQNEIEDLMADVERSNAAAAALDKKQRNFDKILSEWKQKFEESQTE 1461

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +      +  RSL  +L ++++ Y     LE+  +  R   +  ++ L + + L      
Sbjct: 1462 LEASQKEA--RSLSTELFKLKNAYEE--SLEHLETFKRENKNLQEEILDLTEQLGASQK- 1516

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            S ++L +  + +    LEL+  + E +  L H       A LEF     +  R L +   
Sbjct: 1517 SIHELEKVRKQLDAEKLELQAALEEAEASLEHEEGKILRAQLEFNQVKADYERKLAEKDE 1576

Query: 272  TFAD 275
                
Sbjct: 1577 EIEQ 1580



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 69/226 (30%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  +  + +  K   +  L   I+ E++    L  K   L+   
Sbjct: 1051 EGDLKLAQESIMDLENDKQQLEERLKKKDFELNTLNARIEDEQAISAQLQKKLKELQARI 1110

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE+L            +     +         +L         +L+L  K       
Sbjct: 1111 EELEEELEAERTGR--AKVEKLRSELLQELEETSERLEEAGGATSVQLELNKKREAEFQK 1168

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
            L    ++ T+                   +    S  EL E +   + + + + +   E 
Sbjct: 1169 LRRDLEEATLQHEATA---------ATLRKKHADSVAELSEQLDNLQRVKQKLEKEKSEL 1219

Query: 252  NLEF------ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             LE          L +   +LE+  RT  D+M++     +  ++  
Sbjct: 1220 KLELDDVNSNTEQLIKAKTNLEKMCRTTEDQMNEHRSKLEEAQRTV 1265



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 74/206 (35%), Gaps = 5/206 (2%)

Query: 87   FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESREEQLLDFLG 143
             +  E           ++ +R  +D EK  L     + +     E+    R +   + + 
Sbjct: 1505 LDLTEQLGASQKSIHELEKVRKQLDAEKLELQAALEEAEASLEHEEGKILRAQLEFNQVK 1564

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +       +  I    R+    +  +++         N++  L+  +     ++ +  
Sbjct: 1565 ADYERKLAEKDEEIEQSKRNHLRVVDSLQTSLDAETRSRNEALRLKKKMEGDLNEMEIQL 1624

Query: 204  NLFEKNAV-SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            +   + A  +Q  +   +  +  + L+L + +   +++  +I  + +  N    + L+E+
Sbjct: 1625 SHANRTAAEAQKQVKALQGYLKDTQLQLDDVVRANEDLKENI-AIVERRNNLLQSELEEL 1683

Query: 263  SRDLEQNQRTFADEMSKLTILEKTRE 288
               +EQ++R       +L    +  +
Sbjct: 1684 RAMVEQSERARKLAEQELIEASERVQ 1709



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 68/196 (34%), Gaps = 12/196 (6%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
              E  + I   + + +  +  I       + L  + D      E  ++ +   +      
Sbjct: 1733 QTEVEEAIQECRNAEEKAKKAITDAAMMAEELKKEQDT-SAHLERMKKNMEQTVKDLQLR 1791

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
              +     +    + L+    R+R +     +LE +       +   +K    +K L  +
Sbjct: 1792 LDEAEQLALKGGKKQLQKLEVRVRELEN---ELEAEQKRNAESIKGLRKSERRVKELSYQ 1848

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                + ++ + + +V K  L++       K   R   E  ++AN   A + K +  +L++
Sbjct: 1849 TEEDRKNMVRLQDLVDKLQLKV-------KAYKRQAEEAEEQANSNLAKFRK-VQHELDE 1900

Query: 269  NQRTFADEMSKLTILE 284
             +       S++  L 
Sbjct: 1901 AEERADMAESQVNKLR 1916


>gi|53719632|ref|YP_108618.1| HlyD family secretion protein [Burkholderia pseudomallei K96243]
 gi|134282882|ref|ZP_01769585.1| putative multidrug resistance protein [Burkholderia pseudomallei
           305]
 gi|217423423|ref|ZP_03454924.1| putative multidrug resistance protein [Burkholderia pseudomallei
           576]
 gi|254188512|ref|ZP_04895023.1| HlyD family secretion protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254297918|ref|ZP_04965371.1| HlyD family secretion protein [Burkholderia pseudomallei 406e]
 gi|52210046|emb|CAH36019.1| HlyD family secretion protein [Burkholderia pseudomallei K96243]
 gi|134245968|gb|EBA46059.1| putative multidrug resistance protein [Burkholderia pseudomallei
           305]
 gi|157807581|gb|EDO84751.1| HlyD family secretion protein [Burkholderia pseudomallei 406e]
 gi|157936191|gb|EDO91861.1| HlyD family secretion protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|217393281|gb|EEC33302.1| putative multidrug resistance protein [Burkholderia pseudomallei
           576]
          Length = 395

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/191 (9%), Positives = 60/191 (31%), Gaps = 3/191 (1%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  + ++ ++ ++G   W          +       + N + I    SG +
Sbjct: 49  ERKRPGKKPLVVLAIIVVLLLVGAFVW-WFATRNQVSTDDAY--TDGNAITIAPKVSGYV 105

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               +++   + +G  LL  +  +    +D  +  +   +  +D  +  LD  + ++   
Sbjct: 106 VALAIDDNVYVHRGDLLLVIDQRDYQAQVDAARAQLGLAQAQLDAAQVQLDIAHVQFPAQ 165

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +  +++ E       +  +   +       +  +         R      +      + 
Sbjct: 166 YRQAQAQIEAAQASFRQALAAYERQHAVDARATSQQAIDVADAQRLTADANVATARAQAR 225

Query: 188 LRALLSSHQKD 198
             +L+    + 
Sbjct: 226 TASLVPQQIRQ 236


>gi|304391281|ref|ZP_07373225.1| peptidase M50 [Ahrensia sp. R2A130]
 gi|303296637|gb|EFL90993.1| peptidase M50 [Ahrensia sp. R2A130]
          Length = 713

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 60/164 (36%), Gaps = 10/164 (6%)

Query: 6   WKNLKRNHPASLKRMT---LLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           W +++    A+ + +    +L+ + I  +I WS  + +         ++   +   + +P
Sbjct: 412 WWSIRSKIMAAKRILITGSVLAGLTIAAIIPWSTQIRVPS-------LMTAGHEQALYAP 464

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
           F  ++++     G  + QG  +   +  +    + L +     +   ID   S      +
Sbjct: 465 FPAVVQRVTAREGDVVAQGDVVFVLDAPQLRLDLKLAQEQATLIESRIDRTGSDETDRAS 524

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
              +  +  E RE+ L     +   T    F+  ++ +   L  
Sbjct: 525 LIVLQNELEEVREKLLGLRRVEERLTVRAPFSGRVTDMDPELHE 568



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 49/143 (34%), Gaps = 5/143 (3%)

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L        E+ ++     +     L   Q    +   KL  L +  E+ T+ +P +G 
Sbjct: 499 KLAQEQATLIESRIDRTGSDETDRASLIVLQNELEEVREKLLGLRRVEERLTVRAPFSGR 558

Query: 300 IVYN-QSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
           +           +    +  + ++     + I+  V+ + I   + G  AT  F    + 
Sbjct: 559 VTDMDPELHEGMWINP-KTSLALLQEEGGSRIKGYVSERNI--FRVGVQATATFVP-DNP 614

Query: 359 REKKFKAIIEKIDPIISQQDNNL 381
              K  A + +I    S++ +  
Sbjct: 615 ELPKIDATVSEIATAASEELDEP 637


>gi|303236193|ref|ZP_07322792.1| efflux transporter, RND family, MFP subunit [Prevotella disiens
           FB035-09AN]
 gi|302483608|gb|EFL46604.1| efflux transporter, RND family, MFP subunit [Prevotella disiens
           FB035-09AN]
          Length = 386

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 66/219 (30%), Gaps = 25/219 (11%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            +S  DL   +   + +    R    E       +NE    A  ++     E+     Q 
Sbjct: 108 YLSHPDLVNLQTDYFSALNRQRYLKKEFDRQTMMLNEGVG-AGKDYDRTKSELQTVSGQV 166

Query: 270 QRTFADEMSKLTILEKTREQ------KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP 323
           Q   A ++ +L I      +        + SPI GT+      +   Y      +MKI  
Sbjct: 167 QM-LAAQLKQLGISTSALRKGKPMLAIALTSPINGTVEQINVQT-GQYVSPEMAMMKIA- 223

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQT 383
           ++   Y   +V  + +  +K G    ++  H         K  +  I      +   +  
Sbjct: 224 NTSNMYAELQVFQRDVPKIKVGQAVAMKIVHADGT---ACKGKVYSIGKTFRAETQTVD- 279

Query: 384 QEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA-KNTT 421
                V +++        +  L  G   +         T
Sbjct: 280 -----VRVRLD-----GQHTGLIVGMYVQAKIATSSERT 308



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 45/120 (37%), Gaps = 2/120 (1%)

Query: 40  IEISVSSSGEILNEDNVV-EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
           +  SV  +G++  +      I     G +K+  V  G  + +G  +      +  +L   
Sbjct: 61  LVSSVDVNGKLAVDPQSEATITPQMGGNVKQILVHEGQSVTKGMVVAYLSHPDLVNLQTD 120

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
              ++   R ++  E      + N+     K ++  + +L    G+     +++   GIS
Sbjct: 121 YFSALNRQR-YLKKEFDRQTMMLNEGVGAGKDYDRTKSELQTVSGQVQMLAAQLKQLGIS 179


>gi|264676485|ref|YP_003276391.1| efflux transporter RND family, MFP subunit [Comamonas testosteroni
           CNB-2]
 gi|262206997|gb|ACY31095.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           CNB-2]
          Length = 438

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 58/183 (31%), Gaps = 16/183 (8%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +        +++  +GI++K   + GS +  G  L   ++      +   + ++   
Sbjct: 78  PGRLEPSRIAQ-VRARAAGIVQKRLFQEGSDVKAGQALFQIDNTPYKANLQSAQATLAQA 136

Query: 107 RCHIDTEKSAL-------DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             ++    +         +         + A  + +  L        +  +   N G +S
Sbjct: 137 EANLAQASATARRYKPLVEANAISKQEYDTAIANEKAALAQVAAGKAAVTNANVNLGYAS 196

Query: 160 VYRSLKMKLTR--------MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
           V   +  ++ R        +      +L    + + L   L+    D+  M+       +
Sbjct: 197 VTAPISGRIGRALVTEGALVGQGEATQLATIQQVNPLYVNLTQSSSDIMRMREALSSGKL 256

Query: 212 SQN 214
           ++ 
Sbjct: 257 AKV 259


>gi|168984996|emb|CAQ10498.1| coiled-coil alpha-helical rod protein 1 [Homo sapiens]
 gi|168985401|emb|CAQ07085.1| coiled-coil alpha-helical rod protein 1 [Homo sapiens]
 gi|168985843|emb|CAQ10777.1| coiled-coil alpha-helical rod protein 1 [Homo sapiens]
 gi|272718627|gb|ACZ95702.1| coiled-coil alpha-helical rod protein 1 [Homo sapiens]
 gi|272718629|gb|ACZ95704.1| coiled-coil alpha-helical rod protein 1 [Homo sapiens]
          Length = 782

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 79/204 (38%), Gaps = 5/204 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + L+   ++  R  +D E      L  +     +     E Q L  + +      +   
Sbjct: 500 DVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQ 559

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAVS 212
             ++S+   L++     +        L  + +  + L   +  +K   +   L E+ + +
Sbjct: 560 ESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDT 619

Query: 213 QNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +  LN+  R   K+ + LR+      ++K   + +  L +EA  E    L    ++LE++
Sbjct: 620 ERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERD 679

Query: 270 QRTFADEMSKLTILEKTREQKTIL 293
           +      + +  +L + ++Q+ + 
Sbjct: 680 KNLMLATLQQEGLLSRYKQQRLLT 703



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 62/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E ++  L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 85  QALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEA- 143

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+    Q +L + +R+  +    L +   E  + L    E  
Sbjct: 144 -EGLRAALAGAEVVRKNLEEG--RQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGL 200

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 201 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 243


>gi|90960808|dbj|BAE92751.1| a-helix coiled-coil rod homologue [Pan troglodytes]
          Length = 756

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 79/205 (38%), Gaps = 5/205 (2%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             + L+   ++  R  +D E      L  +     +     E Q L  + +      +  
Sbjct: 473 ADVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQT 532

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAV 211
              ++S+   L++     +        L  + +  + L   +  +K   +   L E+ + 
Sbjct: 533 QESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSD 592

Query: 212 SQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           ++  LN+  R   K+ + LR+      ++K   + +  L +EA  E    L    ++LE+
Sbjct: 593 TERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELER 652

Query: 269 NQRTFADEMSKLTILEKTREQKTIL 293
           ++      + +  +L + ++Q+ + 
Sbjct: 653 DKNLMLATLQQEGLLSRYKQQRLLT 677



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 62/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E +   L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 59  QALSQQAEVIARQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEA- 117

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+   SQ +L + +R+  +    L +   E  + L    E  
Sbjct: 118 -EGLRAALAGAEVVRKNLEEG--SQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGL 174

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 175 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 217


>gi|91225992|ref|ZP_01260919.1| putative periplasmic linker protein [Vibrio alginolyticus 12G01]
 gi|91189433|gb|EAS75710.1| putative periplasmic linker protein [Vibrio alginolyticus 12G01]
          Length = 365

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/154 (8%), Positives = 47/154 (30%), Gaps = 2/154 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V+ G ++ +G  + T +  +    +D        +       +  +D      
Sbjct: 67  GEVSRIMVKEGDKVTKGDVIATLDPTDYELDVDNASARFSVVDSQYRRSRPLVDKGLLAK 126

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              ++    R+  L +                +  +   + +       +  + +++ + 
Sbjct: 127 SQFDEIAAQRQIALAELQLAKLRLSFTALKAPVDGIISRVNIDQFENVQVGQHIVNIHSL 186

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
             +   +L      L + +   E+   +   L +
Sbjct: 187 ERV--EVLIQLPDRLYVNQPPTEERLTAIKALVR 218


>gi|212449|gb|AAA48985.1| nonmuscle myosin heavy chain [Gallus gallus]
          Length = 1976

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 16/213 (7%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ E   L+  N+K+   +K  E R  +    L +       
Sbjct: 965  ARQKLQLEKVTAEAKIKKMEEEILLLEDQNSKFLKEKKLMEDRIAECTSQLAEEEEKAKN 1024

Query: 152  V-------------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
            +                 +    ++ +      R +     DL+++ + L+A +   +  
Sbjct: 1025 LAKLKNKQEMMITDLEERLKKEEKTRQELEKAKRKLDGETTDLQDQIAELQAQIEELKIQ 1084

Query: 199  LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
            L   +   +      ++   Q+    K   EL+  I E +  L       ++A  +  + 
Sbjct: 1085 LAKKEEELQAALARGDEEAVQKNNALKVIRELQAQIAELQEDLESEKASRNKAEKQKRDL 1144

Query: 259  LKEISR---DLEQNQRTFADEMSKLTILEKTRE 288
             +E+     +LE    T A +    T  E+   
Sbjct: 1145 SEELEALKTELEDTLDTTAAQQELRTKREQEVA 1177



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 72/210 (34%), Gaps = 8/210 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE---KAFESREEQLLDFLGKYHS 147
            E        +  ++ +R  ++  +  L    +    LE   +A +++ E+ L    + + 
Sbjct: 1529 ELEKSKRTLEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQARDEQNE 1588

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLF 206
               ++    +  +   L+ +  +       +  +E     L   + +  K     +K L 
Sbjct: 1589 EKKRMLVKQVRELEAELEDERKQRALAVAAKKKMEMDLKDLEGQIEAANKARDEAIKQLR 1648

Query: 207  EKNA---VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            +  A     Q +L +      +   + +E+  + K +   I +L +E         +   
Sbjct: 1649 KLQAQMKDYQRELEEARASRDEIFAQSKESEKKLKGLEAEILQLQEEFAAS-ERARRHAE 1707

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            ++ ++     A+  S  + L   + +    
Sbjct: 1708 QERDELADEIANSASGKSALLDEKRRLEAR 1737



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 66/211 (31%), Gaps = 5/211 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
            T +       +  K+            E++       +      A    E        K 
Sbjct: 1158 TLDTTAAQQELRTKREQEVAELKKAIEEETKNHEAQIQEIRQRHATALEELSEQLEQAKR 1217

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-N 204
                 +    G+ S  + L  ++  ++ +         K       L++   +   ++  
Sbjct: 1218 FKANLEKNKQGLESDNKELACEVKVLQQVKAESEHKRKKLDAQVQELTAKVTEGERLRVE 1277

Query: 205  LFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            L EK    QN+L+          K  ++  ++    ++ L+   EL  E   +  N    
Sbjct: 1278 LAEKANKLQNELDNVSSLLEEAEKKGIKFAKDAASLESQLQDTQELLQEETRQKLNLSSR 1337

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
            I R LE+ +    ++  +     K  E++ +
Sbjct: 1338 I-RQLEEEKNNLQEQQEEEEEARKNLEKQML 1367



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 77/207 (37%), Gaps = 7/207 (3%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  +  +     D    ++  L     T +  ++ +  + + LE   ++ E+  L     
Sbjct: 1509 LRADMEDLMSSKDDVGKNVHELEKSKRTLEQQVEEMRTQLEELEDELQATEDAKLRLEVN 1568

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK---DLTM 201
              +  ++      +   ++ + K   ++ +     +LE++       +++ +K   DL  
Sbjct: 1569 MQAMKAQFERDLQARDEQNEEKKRMLVKQVRELEAELEDERKQRALAVAAKKKMEMDLKD 1628

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            ++   E    ++++  +Q R +     + +  + E +     I     E+  +    LK 
Sbjct: 1629 LEGQIEAANKARDEAIKQLRKLQAQMKDYQRELEEARASRDEIFAQSKESEKK----LKG 1684

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTRE 288
            +  ++ Q Q  FA         E+ R+
Sbjct: 1685 LEAEILQLQEEFAASERARRHAEQERD 1711



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 74/221 (33%), Gaps = 26/221 (11%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                D      KN+      E+   +    + +    +  +R  +      +     +K 
Sbjct: 1450 QKKFDQMLAEEKNISARYAEERDRAEAEAREKETKALSL-ARALEEALEAKEEFERQNKQ 1508

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM----------- 201
                +  +  S       +  +  ++  LE +   +R  L   + +L             
Sbjct: 1509 LRADMEDLMSSKDDVGKNVHELEKSKRTLEQQVEEMRTQLEELEDELQATEDAKLRLEVN 1568

Query: 202  ---MKNLFEKNAVSQNDLNQQER-----IVYKSTLELRENIHEQKNMLRHINELY----- 248
               MK  FE++  ++++ N++++      V +   EL +   ++   +    ++      
Sbjct: 1569 MQAMKAQFERDLQARDEQNEEKKRMLVKQVRELEAELEDERKQRALAVAAKKKMEMDLKD 1628

Query: 249  DEANLEFANYLK-EISRDLEQNQRTFADEMSKLTILEKTRE 288
             E  +E AN  + E  + L + Q    D   +L     +R+
Sbjct: 1629 LEGQIEAANKARDEAIKQLRKLQAQMKDYQRELEEARASRD 1669


>gi|167835|gb|AAA33227.1| myosin heavy chain [Dictyostelium discoideum]
          Length = 2116

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 72/208 (34%), Gaps = 5/208 (2%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY-- 145
                  + I  K   I +LR  +D E  +    +       K F   E ++ +   +   
Sbjct: 1527 SGTVNVEFIRKKDAEIDDLRARLDRETESRIKSDEDKKNTRKQFADLEAKVEEAQREVVT 1586

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS--SHQKDLTMMK 203
                 K     I  +   L  +      I  ++  LE   +  RA     S   D  + K
Sbjct: 1587 IDRLKKKLESDIIDLSTQLDTETKSRIKIEKSKKKLEQTLAERRAAEEGSSKAADEEIRK 1646

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             ++++    +  L+ +   +  S  +++  + E   +   + +    A  +     + + 
Sbjct: 1647 QVWQEVDELRAQLDSERAALNASEKKIKSLVAEVDEVKEQLEDEIL-AKDKLVKAKRALE 1705

Query: 264  RDLEQNQRTFADEMSKLTILEKTREQKT 291
             +LE+ +    +E    + LE ++ + T
Sbjct: 1706 VELEEVRDQLEEEEDSRSELEDSKRRLT 1733



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 7/192 (3%)

Query: 90   IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD------FLG 143
             +T       +  I  LR  ++ E++     +     LE   ++   Q+ D       L 
Sbjct: 1835 TQTEIGAAKLEDQIDELRSKLEQEQAKATQADKSKKTLEGEIDNLRAQIEDEGKIKMRLE 1894

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
            K              +V  +   K    +S  L  L+LE+    L+  + + +       
Sbjct: 1895 KEKRALEGELEELRETVEEAEDSKSEAEQSKRLVELELEDARRNLQKEIDAKEIAEDAKS 1954

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            NL  +   ++  L ++      S    +    E   +   ++    +A  +     K+I 
Sbjct: 1955 NLQREIVEAKGRLEEESIARTNSDRSRKRLEAEIDALTAQVDA-EQKAKNQQIKENKKIE 2013

Query: 264  RDLEQNQRTFAD 275
             +L++ ++ F +
Sbjct: 2014 TELKEYRKKFGE 2025



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 69/190 (36%), Gaps = 7/190 (3%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST--CSKVFNYGIS 158
              +  LR  +D+E++AL+    K   L    +  +EQL D +          +     + 
Sbjct: 1650 QEVDELRAQLDSERAALNASEKKIKSLVAEVDEVKEQLEDEILAKDKLVKAKRALEVELE 1709

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM----KNLFEKNAVSQN 214
             V   L+ +      +  ++  L  +   ++    +  +  T +    K L +     + 
Sbjct: 1710 EVRDQLEEEEDSRSELEDSKRRLTTEVEDIKKKYDAEVEQNTKLDEAKKKLTDDVDTLKK 1769

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             L  +++ + +S    +    E ++ L  ++    +         K+  +DL+  +    
Sbjct: 1770 QLEDEKKKLNESERAKKRLESENEDFLAKLDAEV-KNRSRAEKDRKKYEKDLKDTKYKLN 1828

Query: 275  DEMSKLTILE 284
            DE +  T  E
Sbjct: 1829 DEAATKTQTE 1838



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 76/196 (38%), Gaps = 7/196 (3%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            ++ +       + S  NL+  ++ E+ A   L  K   LE   +   EQL +   +  S 
Sbjct: 1250 NVNSDSTNKHLETSFNNLKLELEAEQKAKQALEKKRLGLESELKHVNEQLEEEKKQKESN 1309

Query: 149  CSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS----SHQKDLTMM 202
              +       +S +   ++ ++   +++   +   E++   ++   +    S  K +  +
Sbjct: 1310 EKRKVDLEKEVSELKDQIEEEVASKKAVTEAKNKKESELDEIKRQYADVVSSRDKSVEQL 1369

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            K L  KN   +N   + E  + ++    ++   + +  ++++ E   +  ++    +K+ 
Sbjct: 1370 KTLQAKNEELRNTAEEAEGQLDRAERSKKKAEFDLEEAVKNLEEETAK-KVKAEKAMKKA 1428

Query: 263  SRDLEQNQRTFADEMS 278
              D    +    D  +
Sbjct: 1429 ETDYRSTKSELDDAKN 1444



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 16/194 (8%)

Query: 96   IDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            ++  + + K L    +   + LD         EK  +  E+ L D   K +   +     
Sbjct: 1778 LNESERAKKRLESENEDFLAKLDAEVKNRSRAEKDRKKYEKDLKDTKYKLNDEAATKTQT 1837

Query: 156  GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
             I +    L+ ++  +RS        + K++       + + ++  ++   E     +  
Sbjct: 1838 EIGA--AKLEDQIDELRSKLEQE---QAKATQADKSKKTLEGEIDNLRAQIEDEGKIKMR 1892

Query: 216  LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
            L +++R +     ELRE + E ++      +      LE           LE  +R    
Sbjct: 1893 LEKEKRALEGELEELRETVEEAEDSKSEAEQSKRLVELE-----------LEDARRNLQK 1941

Query: 276  EMSKLTILEKTREQ 289
            E+    I E  +  
Sbjct: 1942 EIDAKEIAEDAKSN 1955


>gi|304410834|ref|ZP_07392451.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS183]
 gi|307304995|ref|ZP_07584745.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           BA175]
 gi|304350731|gb|EFM15132.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS183]
 gi|306912397|gb|EFN42821.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           BA175]
          Length = 438

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 91/287 (31%), Gaps = 14/287 (4%)

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           ++ ++  L   +    SA  F        +    + + +  D  G+     ++     ++
Sbjct: 46  RQFTLSTLALALCVLGSAALFTAQPSWAGDDHGSATQTEQADEHGEQALKLTET-QQDLA 104

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +        +   +     +       + R   ++    L +   +  ++ V   ++ +
Sbjct: 105 GISLLPLSSDSLNITNLNLDIRATATLVVDRDRTATLAPQLDV--RVLARHVVPGQEVKK 162

Query: 219 QE-------RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            E         V ++  +      E   + R        +    A    E+ R + +  +
Sbjct: 163 GEPLLTLGGSAVAQAQADYINAAAEWSRVKRMSEGAVSVSRRMQAQVDAELKRAILEAIK 222

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               ++  L    +      +L+PI G +  + +           PLM++       ++ 
Sbjct: 223 MTPAQIRALESTPEAIGSYQLLAPIDGRVQQDIAM-LGQVFSAGTPLMQLT-DESYLWVE 280

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           A++TP Q  H+  G  A V+          K      ++D +   + 
Sbjct: 281 AQLTPTQTAHITVGGPALVQVG--DKTLAGKIIGRSHELDSVTRTEQ 325



 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 15/143 (10%), Positives = 48/143 (33%), Gaps = 2/143 (1%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDIE-TTD 94
           +  + + + ++  ++ + +     +P   + +    V  G ++ +G PLLT         
Sbjct: 118 ITNLNLDIRATATLVVDRDRTATLAPQLDVRVLARHVVPGQEVKKGEPLLTLGGSAVAQA 177

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             D    + +  R    +E +       +  V  +   +  E +     +  +  S    
Sbjct: 178 QADYINAAAEWSRVKRMSEGAVSVSRRMQAQVDAELKRAILEAIKMTPAQIRALESTPEA 237

Query: 155 YGISSVYRSLKMKLTRMRSIYLN 177
            G   +   +  ++ +  ++   
Sbjct: 238 IGSYQLLAPIDGRVQQDIAMLGQ 260


>gi|304386803|ref|ZP_07369068.1| multidrug efflux periplasmic linker protein BpeA [Neisseria
           meningitidis ATCC 13091]
 gi|304339112|gb|EFM05201.1| multidrug efflux periplasmic linker protein BpeA [Neisseria
           meningitidis ATCC 13091]
          Length = 412

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 2/170 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GII+K   + GS +  G PL   +       ++  +  +   +  +   K+  D
Sbjct: 75  VRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEANLESARAQLATAQATLA--KADAD 132

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  V  +A   +E        +      K     I S   +L              
Sbjct: 133 LARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQAAIKSAGINLNRSRITAPISGFIG 192

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               ++ +LL A  ++    +     ++     S +++ +  R + +  L
Sbjct: 193 QSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKL 242


>gi|297277680|ref|XP_002808252.1| PREDICTED: LOW QUALITY PROTEIN: myosin-14-like [Macaca mulatta]
          Length = 2148

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 73/212 (34%), Gaps = 11/212 (5%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD-----VLEKAFESREEQLLDFL 142
            E  E  + +  ++   + LR  +  ++  L     + +       +     RE Q     
Sbjct: 1264 ESSELQEQMVEQQQRAEELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAALAE 1323

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +      +V         R L  +L  +RS   + LD  N    LR+     Q+   + 
Sbjct: 1324 AQEDLEAERVARTKAEKQRRDLGEELEALRSELEDTLDSTNAQQELRS--KREQEVTALK 1381

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            K L E+  + +  + +  +   ++  EL E + + +         +++  L     + E+
Sbjct: 1382 KTLEEETRIHEAAVQELRQRHGQALGELAEQLEQARRGKG----AWEKTRLALEAEVSEL 1437

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              +L   Q    +   +   LE   ++    +
Sbjct: 1438 RAELSSLQTARQEGEQRRRRLESQLQEVQGRA 1469



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 72/209 (34%), Gaps = 15/209 (7%)

Query: 100  KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL------LDFLGKYHSTCSKVF 153
            +   ++L   ++  +S L+   +  +  ++    RE+++      L+   + H    +  
Sbjct: 1339 EKQRRDLGEELEALRSELEDTLDSTNAQQELRSKREQEVTALKKTLEEETRIHEAAVQEL 1398

Query: 154  NYGISSVYRSLKMKLTRMRSI----YLNRLDLENKSSLLRALLSSHQ----KDLTMMKNL 205
                      L  +L + R         RL LE + S LRA LSS Q    +     + L
Sbjct: 1399 RQRHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAELSSLQTARQEGEQRRRRL 1458

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
              +    Q      ER   ++  +L+    E +N+   +NE   +A +  +  L      
Sbjct: 1459 ESQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGALNEAESKA-IRLSKELSSTEAQ 1517

Query: 266  LEQNQRTFADEMSKLTILEKTREQKTILS 294
            L   Q    +E      L          +
Sbjct: 1518 LHDAQELLQEETRAKLALGSRVRAMEAEA 1546



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 7/203 (3%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +      + +   L+  N+K     K  E R  +      +       
Sbjct: 1166 ARQKLQLEKVTTEAKMKKFEEDLLLLEDQNSKLSKERKLLEDRLSEFSSQAAEEEEKVKS 1225

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +    +     ++     R+R     R +LE     L    S  Q+ +   +   E+   
Sbjct: 1226 LNKLRLK-YEATIADMEDRLRKEEKGRQELEKLKRRLDGESSELQEQMVEQQQRAEE--- 1281

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE--ISRDLEQN 269
             +  L ++E  +  +     +    +  +L+ + E          +   E       E+ 
Sbjct: 1282 LRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLEAERVARTKAEKQ 1341

Query: 270  QRTFADEMSKLTI-LEKTREQKT 291
            +R   +E+  L   LE T +   
Sbjct: 1342 RRDLGEELEALRSELEDTLDSTN 1364


>gi|149058577|gb|EDM09734.1| protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF),
           interacting protein (liprin), alpha 4 [Rattus
           norvegicus]
          Length = 1185

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 80/247 (32%), Gaps = 21/247 (8%)

Query: 53  EDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDI----ETTDLIDLKKVSIKNLR 107
                ++ +   G  I+    E    +  G   L  +D     E   L++ +   +   R
Sbjct: 187 AGAHQQVSALQQGAGIRDGVAEEEETVDLGPKRLWKDDTGRVEELQGLLEKQNYELSQAR 246

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF--NYGISSVYRSLK 165
             + T  + +  L        +     EE             ++       I+++ +   
Sbjct: 247 ERLVTLSATVTELEEDLGTARRDLIKSEELSGKHQRDLREALAQKEDMEERITTLEKRYL 306

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER---I 222
                  SI+     LEN+ +   +L    ++    ++ L E   V++  L Q  R    
Sbjct: 307 AAQREATSIHDLNDKLENELANKESLHRQCEEKARHLQELLE---VAEQKLQQTMRKAET 363

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           + +   EL + I              +E +     +L+++   LE+  +  A    +  +
Sbjct: 364 LPEVEAELSQRIAALTKA--------EERHGNIEEHLRQLEGQLEEKNQELARVRQREKM 415

Query: 283 LEKTREQ 289
            E   ++
Sbjct: 416 NEDHNKR 422


>gi|145976948|ref|NP_766148.2| centrobin [Mus musculus]
 gi|85540706|sp|Q8CB62|CNTRB_MOUSE RecName: Full=Centrobin; AltName: Full=Centrosomal
           BRCA2-interacting protein; AltName:
           Full=LYST-interacting protein 8
 gi|168984396|emb|CAQ13013.1| centrobin, centrosomal BRCA2 interacting protein [Mus musculus]
          Length = 887

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 71/219 (32%), Gaps = 11/219 (5%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           LT             +      R    +E   L+ L        +A+  +E QL + L  
Sbjct: 311 LTLRLEVEQQQCRTLQEERDEARAGQLSEHRKLEALQVALQEERQAWIKQEHQLKERLQA 370

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD---LENKSSLLRALLSSHQKDLTM 201
                         +  R  +      +   L + +   LE     +R    + Q ++++
Sbjct: 371 LQEEGQAQLEREKGNSQREAQAAWETQQQFALLQTEVRRLEGDLDTVRRERDALQLEMSL 430

Query: 202 MKNLFEKNAVS-------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           ++  +E   +        Q +    ER+       LR+    + +  + + EL  +   E
Sbjct: 431 VQARYESQRIQMESELAVQLEQRVTERLAEAQENSLRQAASLRDHHRKQLQELSGQHQQE 490

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            A  L +   ++   +     ++++   L   REQ  + 
Sbjct: 491 LAAQLAQFKVEMAD-REERQQQVAQDYELRLAREQARVR 528


>gi|324499742|gb|ADY39897.1| 227 kDa spindle- and centromere-associated protein [Ascaris suum]
          Length = 1887

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 18/211 (8%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
               +       I      IK+LR   +  ++    L  + +V + +    E ++ D  G+
Sbjct: 1354 FELQARGKEAQIRHLNEQIKSLRTEAENAQAEARSLREREEVWDTSKFKLESKMRDHEGE 1413

Query: 145  YH--STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK-DLTM 201
                S     F     S+  S+K   +++++      DL +    L+  LS  +  ++ +
Sbjct: 1414 SQRVSILMSSFETERQSLNESVKKLASQLQASEGKNADLRDDVEKLKRDLSKAESLEVEL 1473

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             ++L EK  V+Q                LRE +   K+ L + N    +   E      E
Sbjct: 1474 RRSLEEKTRVAQ------------DASGLREQLSIAKSDLANANSRKQQLESELLTVRSE 1521

Query: 262  ISRD---LEQNQRTFADEMSKLTILEKTREQ 289
            +      L       +D   +L   +  + +
Sbjct: 1522 LREQKQHLNDASNRLSDLQRQLVDAQNEKNR 1552



 Score = 36.5 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 68/212 (32%), Gaps = 6/212 (2%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           F D  +   + + + ++         ++ A+   +  Y  +        E   + + KY 
Sbjct: 141 FSDTASESGMVINQDTVLVEAVKRFRDQQAVPPGSQLYGEMRMPTSGDAELHKELMKKYE 200

Query: 147 STCSKVFN-----YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            +  ++        G +    +L+ +L R +      L+   K  +L    S        
Sbjct: 201 ESIERIIELESRGDGSAGKVSNLEAELKRTKDRLTECLETLRKLHILAKESSQDADKAIG 260

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           +        V    L     ++     EL++   + KN    INEL  +         + 
Sbjct: 261 VLPPGSAQVVPSEVLRSVRYVIRSRDNELQQLQRKLKNADTQINELEVQLEG-AEEARRR 319

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
           + + L   ++  AD+   L    +  ++    
Sbjct: 320 LEKQLADARKDIADQTKTLDEANREIKRLEER 351


>gi|320195458|gb|EFW70083.1| Putative membrane protein [Escherichia coli WV_060327]
          Length = 256

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 23/187 (12%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
           N+ +   V+  DL            EL     +       + +  +EAN           
Sbjct: 30  NIKDNQLVNAGDLLLTIDKTPFQIAELNAQ-AQLAKAQSDLAKANNEANRRRHLSQNYIS 88

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS 315
           A  L   + +++  Q +     + L   +    Q  I +P++G +    +    +YA   
Sbjct: 89  AEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTR-IGDYADTG 147

Query: 316 QPLMKIVPHSKLTYI----RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
           +PL  +V       I      K+      H+++G  A +          K  +     I 
Sbjct: 148 KPLFALVDSHSFYVIGYFEETKLR-----HIREGAPAQITL----YSDNKTLQGHASSIG 198

Query: 372 PIISQQD 378
             I  Q 
Sbjct: 199 RAIYDQS 205



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 37/122 (30%), Gaps = 11/122 (9%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-----ETTDLIDLKKV 101
            G+I  E   V I    SG I +  +++   +  G  LLT +       E      L K 
Sbjct: 8   DGKIRAEQ--VSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKA 65

Query: 102 SIKNLRCHIDTEKSALDFLN----NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
                + + +  +      N     + D      ++ +  +            ++    I
Sbjct: 66  QSDLAKANNEANRRRHLSQNYISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEI 125

Query: 158 SS 159
            +
Sbjct: 126 RA 127


>gi|167840603|ref|ZP_02467287.1| putative efflux transporter, MFP subunit [Burkholderia
           thailandensis MSMB43]
          Length = 357

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/293 (10%), Positives = 77/293 (26%), Gaps = 19/293 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           V E  F    + L +   +         N        +     +++     ++   +   
Sbjct: 65  VDEGDFVKAGQPLANMQIQVLRAQYDEANAQRQRALNTAAGVQSQVAQRKSDKAAAQAMV 124

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
            L  + L + Q+ L   + L  + A S  +L+        +   +     +       I 
Sbjct: 125 VLRDSELDAAQRRLARSETLSREGASSMQELDDDRARARSAQAAVSAAAAQVAAAQAAIE 184

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
                               L           + +  ++   +   + SP  G + Y + 
Sbjct: 185 AT---------------EAQLVAAHSAVTAADATVARVQADIDDSQLASPRDGRVQY-RV 228

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                       ++ +V  S   Y+   +    +  V  G  A +      +       +
Sbjct: 229 AQPGEVLPAGGKVLNLVDLSD-VYMTFFLPETVVGKVALGADARIILDAAPNYVIPATVS 287

Query: 366 IIEKIDPIISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            +        +  +  N + +  + V  +I       +   ++ G P      
Sbjct: 288 FVSSTAQFTPKTVETANERQKLMFRVKARIDRELLQKHLKLVKTGLPGVAWVR 340


>gi|126727769|ref|ZP_01743599.1| efflux transporter, RND family, MFP subunit [Rhodobacterales
           bacterium HTCC2150]
 gi|126702896|gb|EBA01999.1| efflux transporter, RND family, MFP subunit [Rhodobacterales
           bacterium HTCC2150]
          Length = 488

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 70/226 (30%), Gaps = 19/226 (8%)

Query: 51  LNEDNVVEIKSPFSGIIKKF--QVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRC 108
           +     +++++P  G + +     E G ++  G  LL  +  +    + + +  +   + 
Sbjct: 72  IRSRRTLDVRAPSGGQVIEVAQNFEEGGRVEAGQLLLRIDPAQALSALAVAETDVAEAKA 131

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQL---LDFLGKYHSTCSKVFNYGISSVYRSLK 165
            +      L+   +         E R++ L    D L +   T S V    +++      
Sbjct: 132 DVLDAARTLELSRDDAKASMAQAELRKQALQRQQDLLRRGVGTESAVETAALAASSAEQA 191

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--------------NLFEKNAV 211
           +   R           +  ++L R  ++  +    + +               L +   V
Sbjct: 192 VVTRRKSEAQAEARVSQTATALARREINLAEAKRKLDETELRAEFSGTLASVTLVQGGLV 251

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           S N+            +  R +  E   +L    EL   A     +
Sbjct: 252 SNNERLASLIDATALEVSFRVSTAEYARLLNTDGELLGSAIQVVLD 297


>gi|121704740|ref|XP_001270633.1| ANTH domain protein [Aspergillus clavatus NRRL 1]
 gi|119398779|gb|EAW09207.1| ANTH domain protein [Aspergillus clavatus NRRL 1]
          Length = 1043

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 71/219 (32%), Gaps = 5/219 (2%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++ Q   L      +T   +   +    N R   + ++  L   + +   LE+    
Sbjct: 350 EQQRLAQEQLLREQYQTQTQGRLAELERENLNARAQYERDQLMLQQYDRRVKDLEEQMAH 409

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
               L +          +     +++     +        +    LDL   +  L+   +
Sbjct: 410 LNTNL-NMQNASKDEQIRALQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTTKSLKLKAA 468

Query: 194 SHQKDLT----MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
           S Q+ +     + + L  KN    + + +++R ++        N  E + + R +    +
Sbjct: 469 SAQEAIDRREKLERELKTKNLELADMIRERDRALHDRDRLTGTNKEELEKLKRELRLAIE 528

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
            A     +   EIS  L +  R  AD    L    +  E
Sbjct: 529 RAENAERSKGTEISSLLSKYNREMADLEESLRKKTRALE 567



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 79/210 (37%), Gaps = 7/210 (3%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           FE+ +       +    + LR    T+         + ++  +A   R++ +L    +  
Sbjct: 341 FEEQQRLQAEQQRLAQEQLLREQYQTQTQGRLAELERENLNARAQYERDQLMLQQYDRRV 400

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD----LTMM 202
               +   +  +++      K  ++R++        +K   L  L S  +++    L   
Sbjct: 401 KDLEEQMAHLNTNLNMQNASKDEQIRALQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTT 460

Query: 203 KNLFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           K+L  K A +Q  +++    ER +    LEL + I E+   L   + L      E     
Sbjct: 461 KSLKLKAASAQEAIDRREKLERELKTKNLELADMIRERDRALHDRDRLTGTNKEELEKLK 520

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +E+   +E+ +     + ++++ L     +
Sbjct: 521 RELRLAIERAENAERSKGTEISSLLSKYNR 550



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 55/170 (32%), Gaps = 3/170 (1%)

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
           D  E+     E+Q L                 ++ + R       +     L     + +
Sbjct: 340 DFEEQQRLQAEQQRLAQEQLLREQYQTQTQGRLAELERENLNARAQYERDQLMLQQYDRR 399

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
              L   ++    +L M     ++   +  +     R  Y++  +L   + ++   L   
Sbjct: 400 VKDLEEQMAHLNTNLNMQNASKDEQIRALQEQVNTWRSKYEALAKLYSQLRQEHLDLLQT 459

Query: 245 NE---LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            +   L   +  E  +  +++ R+L+      AD + +       R++ T
Sbjct: 460 TKSLKLKAASAQEAIDRREKLERELKTKNLELADMIRERDRALHDRDRLT 509


>gi|90960810|dbj|BAE92752.1| a-helix coiled-coil rod homologue [Pan troglodytes]
          Length = 756

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 79/205 (38%), Gaps = 5/205 (2%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             + L+   ++  R  +D E      L  +     +     E Q L  + +      +  
Sbjct: 473 ADVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQT 532

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAV 211
              ++S+   L++     +        L  + +  + L   +  +K   +   L E+ + 
Sbjct: 533 QESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSD 592

Query: 212 SQNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           ++  LN+  R   K+ + LR+      ++K   + +  L +EA  E    L    ++LE+
Sbjct: 593 TERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELER 652

Query: 269 NQRTFADEMSKLTILEKTREQKTIL 293
           ++      + +  +L + ++Q+ + 
Sbjct: 653 DKNLMLATLQQEGLLSRYKQQRLLT 677



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 62/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E +   L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 59  QALSQQAEVIARQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEA- 117

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+   SQ +L + +R+  +    L +   E  + L    E  
Sbjct: 118 -EGLRAALAGAEVVRKNLEEG--SQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGL 174

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 175 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 217


>gi|55742222|ref|NP_001006805.1| myosin, heavy chain 2, skeletal muscle, adult [Xenopus (Silurana)
            tropicalis]
 gi|50368680|gb|AAH76678.1| myosin, heavy polypeptide 13, skeletal muscle [Xenopus (Silurana)
            tropicalis]
          Length = 1939

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 81/229 (35%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   L+  ID   S L+ ++     LEK     E+QL +   + 
Sbjct: 1209 QIDNLQRVKQKLEKEKS--ELKMEIDDLASNLENVSKSKANLEKLSRVLEDQLSEIKSRD 1266

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                + R L+ K + +  +   +     ++  L+  L    
Sbjct: 1267 DEHQRIINDLTAQKARLQTENGELSRQLEEKESLVSQLTRGKQGFTQQTEELKRQLEEET 1326

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K    + +  + +    + L +Q     ++  EL+ ++ +    +      Y+   ++  
Sbjct: 1327 KAKNALAHALQSSRHDCDLLREQYEEEQEAKAELQRSLSKANTEVSQWRTKYETDAIQRT 1386

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTI--LEKTREQKTILSPIAGTIVYN 303
              L+E  + L Q  +   +++  +        + ++ + + +   +V  
Sbjct: 1387 EELEEAKKKLAQRLQEAEEQVEAVNSKCASLEKTKQRLQAEVEDLMVDV 1435



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 75/224 (33%), Gaps = 19/224 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  +T + +  K   +  L+  I+ E+S    L  K   L+   
Sbjct: 1059 EGDLKLAQETIMDLENDKQQTEEKLKKKDFELSQLQGKIEDEQSVGCQLQKKIKELQARI 1118

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1119 EEVEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATSAQIEMNKKREA---- 1172

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1173 -----EFQKLRRDLEESTLQHEATSAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSEL 1227

Query: 252  NLEFANYLKEIS------RDLEQNQRTFADEMSKLTILEKTREQ 289
             +E  +    +        +LE+  R   D++S++   +   ++
Sbjct: 1228 KMEIDDLASNLENVSKSKANLEKLSRVLEDQLSEIKSRDDEHQR 1271


>gi|146294342|ref|YP_001184766.1| RND family efflux transporter MFP subunit [Shewanella putrefaciens
           CN-32]
 gi|145566032|gb|ABP76967.1| efflux transporter, RND family, MFP subunit [Shewanella
           putrefaciens CN-32]
          Length = 388

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 60/202 (29%), Gaps = 26/202 (12%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++  +   E    K+  +L +           +  + D    E     K+   +L +N 
Sbjct: 108 VTKGQVIA-ELDNTKAKADLDKAKSALALAKTKLERVEDLLIKEPFALAKQDVDELRENV 166

Query: 271 RTF-ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
               AD   K  I+        I +P  G +    S S  +       L+ +        
Sbjct: 167 NLADADFRQKQAIMNDYL----IKAPFDGQLTSF-SQSIGSQIGAGTALVTLYSLHP--- 218

Query: 330 IRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYY 387
           +  +  ++       KKG    V    Y     + F  ++  + P I +           
Sbjct: 219 VEVRYAISQNDFGKAKKGQEVDVTVEAYG---TQIFNGVVNYVAPAIDESAG-------- 267

Query: 388 EVILKITDLAFSDNNIELRNGF 409
              ++I      +   +L  G 
Sbjct: 268 --RVEI-HATIDNAEFKLAPGM 286



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 44/114 (38%), Gaps = 18/114 (15%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL--------- 117
           I      NG ++ +G  +   ++ +    +D  K ++   +  ++  +  L         
Sbjct: 97  ISAIHFSNGDKVTKGQVIAELDNTKAKADLDKAKSALALAKTKLERVEDLLIKEPFALAK 156

Query: 118 ---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
              D L    ++ +  F  ++  + D+L K        F+  ++S  +S+  ++
Sbjct: 157 QDVDELRENVNLADADFRQKQAIMNDYLIKAP------FDGQLTSFSQSIGSQI 204


>gi|116049183|ref|YP_792015.1| hypothetical protein PA14_48350 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296390391|ref|ZP_06879866.1| hypothetical protein PaerPAb_19656 [Pseudomonas aeruginosa PAb1]
 gi|115584404|gb|ABJ10419.1| putative membrain protein [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 302

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 59/207 (28%), Gaps = 20/207 (9%)

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
            V +   EL +     +            A       +    R L   +       + L 
Sbjct: 84  AVRQREAELEQARETLRQRDEQWRRRMQLAGAVSREEVANAGRALRIARARAEAAGAALD 143

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQH 341
                  +  + SP+ G +   +     +YA   +  + IV   +  ++       ++++
Sbjct: 144 QARLDLRRSELRSPVDGYVTQLRV-QPGDYAAAGRTNIFIV-DRRSFWVTGYFEETKLRN 201

Query: 342 VKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQ------QDNNLQTQEYY-------E 388
           V+ G  AT++   +           +  I   ++            Q    +        
Sbjct: 202 VQVGAPATIKLMGFD----PLLDGHVASIGRGVADLNESRADSGLPQVSPNFSWIRLAQR 257

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLF 415
           V ++I +L      + L  G    V  
Sbjct: 258 VPVRI-ELDRVPAGVVLAAGMTGSVEV 283



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 44/122 (36%), Gaps = 6/122 (4%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
               V+ I    SG ++   V +  ++ +G PL   +       +  ++  ++  R   +
Sbjct: 41  VSAQVIRIAPEVSGSVEAVLVADNQRVARGDPLYRIDPRSYRLAVRQREAELEQAR---E 97

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM 171
           T +   +    +  +   A     E++ +         ++    G +     L ++ + +
Sbjct: 98  TLRQRDEQWRRRMQL---AGAVSREEVANAGRALRIARARAEAAGAALDQARLDLRRSEL 154

Query: 172 RS 173
           RS
Sbjct: 155 RS 156


>gi|325282740|ref|YP_004255281.1| 2,3 cyclic-nucleotide 2-phosphodiesterase [Deinococcus
           proteolyticus MRP]
 gi|324314549|gb|ADY25664.1| 2,3 cyclic-nucleotide 2-phosphodiesterase [Deinococcus
           proteolyticus MRP]
          Length = 605

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 63/212 (29%), Gaps = 4/212 (1%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L   + I      D   +  +        + +AL     + D L        E+    
Sbjct: 38  QALERADTIRREAEADALALREQARSETQAAQAAALAQAQAQADRLLAQARETAEEHRAE 97

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           + +      +      S +            ++   RL LE     L A   + + ++  
Sbjct: 98  VAQNLREQRQQLEDRRSQLTEQHLQVQALQGTVSAERLQLEQDRERLEAERQALKAEMAQ 157

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +    ++  +     + ER      LE +    EQ ++     +  +E   +    L  
Sbjct: 158 ER----EHLSADRQEYRAERDAMNRELERQSRRAEQLDVRGERLDALEERLEKQGRDLAA 213

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            + +L+         + ++  L +   +  IL
Sbjct: 214 QAEELQARAAAADARLQEVAALSREEARARIL 245


>gi|319900449|ref|YP_004160177.1| efflux transporter, RND family, MFP subunit [Bacteroides helcogenes
           P 36-108]
 gi|319415480|gb|ADV42591.1| efflux transporter, RND family, MFP subunit [Bacteroides helcogenes
           P 36-108]
          Length = 391

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 43/85 (50%), Gaps = 3/85 (3%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           VEI+   SG I K  V+ G+ + +G  L + + ++    ++  K +++  +  ++T++  
Sbjct: 57  VEIRPMVSGFITKLHVDEGASVRKGQILFSIDPVQYQATVNSAKAAVETAKAAVNTQELT 116

Query: 117 LD---FLNNKYDVLEKAFESREEQL 138
           ++    LN K  + +   +  E QL
Sbjct: 117 VNNKRELNKKNIISDYDLQMAENQL 141


>gi|308389834|gb|ADO32154.1| membrane fusion protein [Neisseria meningitidis alpha710]
 gi|325138698|gb|EGC61250.1| membrane fusion protein MtrC [Neisseria meningitidis ES14902]
          Length = 412

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 2/170 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GII+K   + GS +  G PL   +       ++  +  +   +  +   K+  D
Sbjct: 75  VRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEANLESARAQLATAQATLA--KADAD 132

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  V  +A   +E        +      K     I S   +L              
Sbjct: 133 LARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQAAIKSAGINLNRSRITAPISGFIG 192

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               ++ +LL A  ++    +     ++     S +++ +  R + +  L
Sbjct: 193 QSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKL 242


>gi|297260956|ref|XP_001083662.2| PREDICTED: myosin-9-like [Macaca mulatta]
          Length = 1879

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 5/199 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ E+  L+  N K    +K  E R  +    L +     SK
Sbjct: 877  ARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTE-EEEKSK 935

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +     +     R+R     R +LE     L    +     +     L  + A 
Sbjct: 936  SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIA---ELQAQIAE 992

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +  L ++E  +  +   + E   ++   L+ I EL  +   E    L+       + ++
Sbjct: 993  LKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELESQI-SELQEDLESERASRNKAEK 1051

Query: 272  TFADEMSKLTILEKTREQK 290
               D   +L  L+   E  
Sbjct: 1052 QKRDLGEELEALKTELEDT 1070



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 68/209 (32%), Gaps = 5/209 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +D   +   +      K     + + ++ +  L  +    E+A    +++  +   + 
Sbjct: 1572 ELDDTRASR--EEILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEI 1629

Query: 146  HSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             ++  K  +       +   +      +     N   + ++       +     DL + +
Sbjct: 1630 ANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLER 1689

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEI 262
            +  +KN  ++  L +Q + +     E+   +  + K  +  +     +   +  N  KE 
Sbjct: 1690 SHAQKNENARQQLERQNKELKVKLQEMEGTVKSKYKASITALEAKIAQLEEQLDNETKER 1749

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +Q +RT       L  ++  R    
Sbjct: 1750 QAACKQVRRTEKKLKDVLLQVDDERRNAE 1778



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 71/225 (31%), Gaps = 37/225 (16%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
               + LR  +  +K  L+ + +  +   +  E R + L     K      ++        
Sbjct: 816  AEAEELRARLTAKKQELEEICHDLEARVEEEEERCQHLQTEKKKMQQNIQELEEQLEEEE 875

Query: 161  YRSLKMKLT----------------------------------RMRSIYLNRLDLENKSS 186
                K++L                                   R+     N  + E KS 
Sbjct: 876  SARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSK 935

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L  L + H+  +T ++    +    + +L +  R +   + +L + I E +  +  +  
Sbjct: 936  SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKM 995

Query: 247  LYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTRE 288
               +   E    L  +  +  Q     +   +  S+++ L++  E
Sbjct: 996  QLAKKEEELQAALARVEEEAAQKNMALKKIRELESQISELQEDLE 1040



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 72/190 (37%), Gaps = 8/190 (4%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            S+  L       +  ++ +  + + LE   ++ E+  L       +  ++          
Sbjct: 1438 SVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDE 1497

Query: 162  RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +S + K   +R +     +LE++       +++ +K    +K+L       +  ++   +
Sbjct: 1498 QSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDL-------EAHIDSANK 1550

Query: 222  IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
               ++  +LR+   + K+ +R +++    +  E     KE  + L+  +        +L 
Sbjct: 1551 NREEAIKQLRKLQAQMKDCMRELDDTRA-SREEILAQAKENEKKLKSMEAEMIQLQEELA 1609

Query: 282  ILEKTREQKT 291
              E+ + Q  
Sbjct: 1610 AAERAKRQAQ 1619



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 75/235 (31%), Gaps = 29/235 (12%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D ++ +        ++ +   ++ E+            LE   +  E  +          
Sbjct: 1496 DEQSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNREEA 1555

Query: 149  CSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--- 203
              ++      +    R L         I     + E K   + A +   Q++L   +   
Sbjct: 1556 IKQLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMIQLQEELAAAERAK 1615

Query: 204  --------NLFE-------KNAVSQNDLNQQERIVYKSTLELRENIH-------EQKNML 241
                     L +       K A++  +  + E  + +   EL E            K   
Sbjct: 1616 RQAQQERDELADEIANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKAN 1675

Query: 242  RHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              I+++  + NLE ++  K     + LE+  +    ++ ++    K++ + +I +
Sbjct: 1676 LQIDQINTDLNLERSHAQKNENARQQLERQNKELKVKLQEMEGTVKSKYKASITA 1730



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 10/167 (5%)

Query: 135  EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            E+   +   K       +       + +  K+   R+     N  + E KS  L  L + 
Sbjct: 884  EKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNK 943

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQER-------IVYKSTLELRENIHEQKNMLRHINEL 247
            H+  +T ++    +    + +L +  R        +     EL+  I E K  L    E 
Sbjct: 944  HEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEE 1003

Query: 248  YDEANLEFANYLKE---ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               A         +     + + + +   ++    L     +R +  
Sbjct: 1004 LQAALARVEEEAAQKNMALKKIRELESQISELQEDLESERASRNKAE 1050



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 74/210 (35%), Gaps = 12/210 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +  D  +   +       +   AL+    +   LE+  +    ++ D +         V
Sbjct: 1380 AEERDRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSV 1439

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                    ++ + ++   T++  +       E+    L   L + +      ++L  ++ 
Sbjct: 1440 HELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFE--RDLQGRDE 1497

Query: 211  VSQNDLNQQERIVYKSTLEL-----RENIHEQKNMLRHINELYDEANLEFANY-LKEISR 264
             S+    Q  R V +   EL     + ++         ++    EA+++ AN   +E  +
Sbjct: 1498 QSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNREEAIK 1557

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILS 294
             L + Q    D M +L   +    ++ IL+
Sbjct: 1558 QLRKLQAQMKDCMRELD--DTRASREEILA 1585


>gi|254805465|ref|YP_003083686.1| membrane fusion protein [Neisseria meningitidis alpha14]
 gi|254669007|emb|CBA07391.1| membrane fusion protein [Neisseria meningitidis alpha14]
          Length = 412

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 2/170 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GII+K   + GS +  G PL   +       ++  +  +   +  +   K+  D
Sbjct: 75  VRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEANLESARAQLATAQATLA--KADAD 132

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  V  +A   +E        +      K     I S   +L              
Sbjct: 133 LARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQAAIKSAGINLNRSRITAPISGFIG 192

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               ++ +LL A  ++    +     ++     S +++ +  R + +  L
Sbjct: 193 QSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKL 242


>gi|242786117|ref|XP_002480740.1| spindle-pole body protein (Pcp1), putative [Talaromyces stipitatus
            ATCC 10500]
 gi|218720887|gb|EED20306.1| spindle-pole body protein (Pcp1), putative [Talaromyces stipitatus
            ATCC 10500]
          Length = 1243

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 66/207 (31%), Gaps = 7/207 (3%)

Query: 95   LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             +   K+ ++N    +  EK+ L+      +    A   R     + L            
Sbjct: 822  ELRKAKLRLENELQRLKDEKTLLEEARKSIEDALNAEIERSTAEENRLSSELVQLQDKLR 881

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLE----NKSSLLRALLSSHQKDLTMMKNLFEKNA 210
              + +  R L +  ++   +     +LE     +   +    SS   D+ +++   +   
Sbjct: 882  ATLRTRDRELTVAKSKAHQLERRIAELEVILEEQQQPVNVESSSVAADIPLLRQNLDDAR 941

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              +  L ++E    KS  ELR  I E +  L               +    +  +L   +
Sbjct: 942  KREKTLLEREGEHKKSIRELRHRISELEEALHEAQMQKLNIASPARSSPNGLQEELRSMR 1001

Query: 271  RTFADEMS---KLTILEKTREQKTILS 294
                D  S   +L    +  E+  I +
Sbjct: 1002 TRLKDAHSIVMELKTKNQELERGAIRA 1028



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 70/202 (34%), Gaps = 4/202 (1%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           +D ++  +  I +L   +  +   +D  + + + L++        + +   +      ++
Sbjct: 331 SDEVERLRDEIGDLEATLREKDRIIDAKDEEIESLKEDEGQNGNAVAELEAELDRARQQL 390

Query: 153 FNYG---ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
             +      +   + +    R +++       EN   L   + +       + + L EK 
Sbjct: 391 EEFQDHIEKARSDAREANRNREQALQQKEKAEENLKELQEEMANKSFSTKGLSRQLEEKA 450

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
              + +LNQ          +       ++ +   + E+ +E   E      + +   EQ 
Sbjct: 451 EDLEKELNQLREEYNDLKEDYALKERREEMLEGQLEEVQEERAAELDALRSKAAAA-EQY 509

Query: 270 QRTFADEMSKLTILEKTREQKT 291
                + +S+L  +    ++KT
Sbjct: 510 LAERDEALSRLKEVLDDLDRKT 531



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 63/194 (32%), Gaps = 7/194 (3%)

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           ++  L   +D  +  L+    +  + +   ++RE              ++     +    
Sbjct: 375 AVAELEAELDRARQQLEE--FQDHIEKARSDAREANRNREQALQQKEKAEENLKELQEEM 432

Query: 162 RSLKMKLTRM-RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            +       + R +     DLE + + LR   +  ++D   +K   E+    Q +  Q+E
Sbjct: 433 ANKSFSTKGLSRQLEEKAEDLEKELNQLREEYNDLKEDYA-LKERREEMLEGQLEEVQEE 491

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI-SRDLEQNQRTFADEMSK 279
           R        LR      +  L   +E          +  ++   ++L Q +     + S 
Sbjct: 492 R--AAELDALRSKAAAAEQYLAERDEALSRLKEVLDDLDRKTDEKELLQTRHHALTDESA 549

Query: 280 LTILEKTREQKTIL 293
               E    Q TI 
Sbjct: 550 GLQRELANVQATIR 563



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 63/206 (30%), Gaps = 18/206 (8%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             +    T   ++ +      +   D E   L     +     +  +   ++ +D++ + 
Sbjct: 249 ELKVARITMQQEISRYKKSLHQAERDLEAYRLQLQELREKAKRRQADEAIQREMDYMREE 308

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
            +T     N     +          +  +     DLE        ++ +  +++  +K  
Sbjct: 309 IATREAQVNNLQEELRNVKDKDSDEVERLRDEIGDLEATLREKDRIIDAKDEEIESLK-- 366

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
                       + E     +  EL   +   +  L    +  ++A  +     +E +R+
Sbjct: 367 ------------EDEGQNGNAVAELEAELDRARQQLEEFQDHIEKARSD----AREANRN 410

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT 291
            EQ  +        L  L++    K+
Sbjct: 411 REQALQQKEKAEENLKELQEEMANKS 436


>gi|195469727|ref|XP_002099788.1| GE16686 [Drosophila yakuba]
 gi|194187312|gb|EDX00896.1| GE16686 [Drosophila yakuba]
          Length = 443

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 7/210 (3%)

Query: 86  TFEDIETTDLIDLKK-VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           T E +E     + ++  +I+ LR  +   +S            +K  E  EEQ      +
Sbjct: 58  TLELLEALATKNERENATIQELRDKVAQLESEKLEKAEFRRRFDKELELIEEQWRSETNE 117

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                S + +     V ++  ++ +  +S  L     E+  S+    L     D  +++ 
Sbjct: 118 LVDLVSSLQDENKRLVKQTQDLQSSSAQSSGLGASLTESIISMTNHELHGALSDTQVLQR 177

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN------Y 258
           L E+    +++L  +ER +     EL     + + +     +      L  A        
Sbjct: 178 LKEQIYKQRDELKHRERELQDKYSELEHLNIQAERLKASERDTRRRHKLMQAQVKTLCEE 237

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
             +    L+   R       +L + EK  E
Sbjct: 238 RADFLAQLQDQSREINQLRKRLGLAEKENE 267


>gi|118099470|ref|XP_415403.2| PREDICTED: similar to CENTRIOLIN [Gallus gallus]
          Length = 2346

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 69/213 (32%), Gaps = 17/213 (7%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                 K+  I+ +       +S LD + ++     +  +  E+QL D     +    + 
Sbjct: 557 RAQKASKEQQIEVMNKQYKQLESRLDEMLSRIAKETEEIKDLEQQLTDGQIATNEALKRD 616

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE----- 207
               I  +   L+    + +       +L+     L   L+  + +   +K +       
Sbjct: 617 LESIIIGLQEYLESVKHQAKQANDECKELQKDKESLFQRLADLEDERNSLKIVVMDAENM 676

Query: 208 -------KNAVSQND-----LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
                  + A+ +       L + +  V     EL   + E+        E  +      
Sbjct: 677 RKEIAMLEGALQEQREINESLREGQGDVSAYEAELEAQLRERDTEANQQKEELERLKQLS 736

Query: 256 ANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
              L  +  +LE+ ++   + ++K  + E+  +
Sbjct: 737 QMELSALQAELEKERQALENALTKAQLAEEKEQ 769



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 79/203 (38%), Gaps = 23/203 (11%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC--- 149
             L    +  I  L+ ++++ K      N++   L+K  ES  ++L D   + +S     
Sbjct: 611 EALKRDLESIIIGLQEYLESVKHQAKQANDECKELQKDKESLFQRLADLEDERNSLKIVV 670

Query: 150 --SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL-------SSHQKDLT 200
             ++     I+ +  +L+ +     S+   + D+    + L A L       +  +++L 
Sbjct: 671 MDAENMRKEIAMLEGALQEQREINESLREGQGDVSAYEAELEAQLRERDTEANQQKEELE 730

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
            +K L      SQ +L+  +  + K    L     E       + E  ++ N +  +  K
Sbjct: 731 RLKQL------SQMELSALQAELEKERQAL-----ENALTKAQLAEEKEQENYKLLSQFK 779

Query: 261 EISRDLEQNQRTFADEMSKLTIL 283
           ++  D    ++   D  ++L+  
Sbjct: 780 QLQGDNNLLKQQLKDLQNQLSHA 802



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 29/240 (12%), Positives = 79/240 (32%), Gaps = 34/240 (14%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
             EI                            E  E  + +   +  +      ++ +  
Sbjct: 677 RKEIAMLEG--------------------ALQEQREINESLREGQGDVSAYEAELEAQLR 716

Query: 116 ALD-FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK-----LT 169
             D   N + + LE+  +  + +L     +       + N    +     K +     L+
Sbjct: 717 ERDTEANQQKEELERLKQLSQMELSALQAELEKERQALENALTKAQLAEEKEQENYKLLS 776

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           + + +  +   L+ +   L+  LS    +L   + +          +N+ ++ +     E
Sbjct: 777 QFKQLQGDNNLLKQQLKDLQNQLSHAVGNLIHPEEVLA-------RINELKQKLRTGAGE 829

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           ++   +    + + +  L  E N   A+  +E  +  E+ ++   + +S+   LE  +E+
Sbjct: 830 IKCQ-NSADVLGKSLASLQKEFNNILADTQREKEKAWERQRQLQEEMVSQKEKLEDIQEK 888



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 77/219 (35%), Gaps = 16/219 (7%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
            L  +  +  + ++  +V++   +  ++  +        + D  E+  +   ++    + +
Sbjct: 1713 LKLQHNQKVNELEKTQVAVLEEKLKLENIQRLFHCQQGEVDWQEQLLQKDRQENEHLVSQ 1772

Query: 145  YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
              +  + + +            + +  + +   R DL      ++  LS+ +K    +KN
Sbjct: 1773 MRTLQNNIESLNKEKQKLEEDCQ-SLEKKLSQTRRDLTATEDSIKTALSNVEKRELDIKN 1831

Query: 205  LFEKNAVS--------------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDE 250
            L ++  V               Q DL +++  +     EL E+  + +   +++ +   +
Sbjct: 1832 LQQEIDVLNKQKKSLHGDITVVQKDLQEKKNELEMLKGELSESRQQLQLAEQNLKD-NTK 1890

Query: 251  ANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               E       +  D+ +  R   D   +    E   +Q
Sbjct: 1891 HQEELLREQATLKEDILKCVRKCKDCQERQKKRENHLQQ 1929


>gi|34556840|ref|NP_906655.1| cation efflux system (czcB-like) [Wolinella succinogenes DSM 1740]
 gi|34482555|emb|CAE09555.1| CATION EFFLUX SYSTEM (CZCB-LIKE) [Wolinella succinogenes]
          Length = 381

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 37/87 (42%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG+I++  V+ G+++ +G  L           I  K+ S+K  +      +   + L+  
Sbjct: 93  SGVIEELLVKEGARVKKGEALARLNSDLLQKEIAAKESSLKQSKAQAAKAEKEFERLSKL 152

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCS 150
           +     +F+  E+ L D   +  S  +
Sbjct: 153 HATQSVSFKEYEDALFDKEAQKSSAEA 179



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 83/241 (34%), Gaps = 23/241 (9%)

Query: 183 NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ--QERIVYKSTLELRENIHEQKNM 240
              S L + +S   ++L + +    K   +   LN    ++ +      L+++  +    
Sbjct: 83  EDRSSLASEVSGVIEELLVKEGARVKKGEALARLNSDLLQKEIAAKESSLKQSKAQAAKA 142

Query: 241 LRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
            +    L      +  ++ +  +   D E  + +     S L  L+    +KT+ +P  G
Sbjct: 143 EKEFERLSKLHATQSVSFKEYEDALFDKEAQKSSAEAVASDLARLKSELGRKTLKAPYEG 202

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
            I+         +      +  +           +V  + ++++K G    ++       
Sbjct: 203 IILEKLLN-PGEWVATGAAIFNMAKL-SPMEASIEVPFETMKNLKVGDRVNLKVA----- 255

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
            +K++ A I+ + P+   +         + V + I      ++  EL  G  A V    +
Sbjct: 256 -QKEYPASIKALIPLGDSKART------FPVKIAID-----NSKGELFEGLEARVRLKTQ 303

Query: 419 N 419
            
Sbjct: 304 E 304


>gi|7020157|dbj|BAA91016.1| unnamed protein product [Homo sapiens]
          Length = 782

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 79/204 (38%), Gaps = 5/204 (2%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + L+   ++  R  +D E      L  +     +     E Q L  + +      +   
Sbjct: 500 DVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQ 559

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAVS 212
             ++S+   L++     +        L  + +  + L   +  +K   +   L E+ + +
Sbjct: 560 ESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDT 619

Query: 213 QNDLNQQERIVYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           +  LN+  R   K+ + LR+      ++K   + +  L +EA  E    L    ++LE++
Sbjct: 620 ERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERD 679

Query: 270 QRTFADEMSKLTILEKTREQKTIL 293
           +      + +  +L + ++Q+ + 
Sbjct: 680 KNLMLATLQQEGLLSRYKQQRLLT 703



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E ++  L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 85  QALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEA- 143

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+   SQ +L + +R+  +    L +   E  + L    E  
Sbjct: 144 -EGLRAALAGAEVVRKNLEEG--SQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGL 200

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 201 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 243



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 69/218 (31%), Gaps = 10/218 (4%)

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V    ++ +    +      +       +     L      EK+           L
Sbjct: 91  AEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAAL 150

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSV----YRSLKMKLTRMRSIYLNRLDLEN 183
             A   R + L +   +      ++    +SS+      +L    ++   +  +   LE 
Sbjct: 151 AGAEVVR-KNLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLET 209

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +     L+  Q++  +++    K   +Q DL  Q  +V      + E +  +  +   
Sbjct: 210 RRAGEAKELAEAQREAELLRKQLSK---TQEDLEAQVTLVENLRKYVGEQVPSE--VHSQ 264

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             EL  +  LE   +L+E    L          +  LT
Sbjct: 265 TWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLT 302


>gi|125775107|ref|XP_001358805.1| GA19376 [Drosophila pseudoobscura pseudoobscura]
 gi|54638546|gb|EAL27948.1| GA19376 [Drosophila pseudoobscura pseudoobscura]
          Length = 2042

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 75/207 (36%), Gaps = 3/207 (1%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +       +  K  SI+ L   ++ +  AL  L ++   L+   +  +E+L         
Sbjct: 1620 DLTRLQMALQEKDCSIRQLSERLENQNRALTQLEDRCTSLKSTVDQLKERLQKSAVSETQ 1679

Query: 148  TCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               ++      +S      +    +++ +  +    EN+  +L   L S Q +L  ++  
Sbjct: 1680 LRGEIKTLQKELSEQGHCSQANEDKLKLLQKSLQTAENEKRILTERLDSSQTNLNELRRS 1739

Query: 206  FEKNAVSQNDLNQQERIVYKSTLELRENIHEQK-NMLRHINELYDEANLEFANYLKEISR 264
             +        L  Q   +      L   +   K N     ++     N   A   +E+SR
Sbjct: 1740 QQAQLDGNQRLQDQVTDLEVQRSALESQLRIAKWNQESGGDKGLSNGNGNGAGGEEELSR 1799

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKT 291
             L+ +QR  ++  SKL  L+   +Q  
Sbjct: 1800 QLKSSQREKSELRSKLQTLQDKVKQLE 1826



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 68/205 (33%), Gaps = 5/205 (2%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL--DFLGKYHSTCS 150
             + +   ++ +          +  L+    +   L+      +E+L   +          
Sbjct: 1555 RERLAQTEMQLAATSEENGQNEERLEKCRQQCSKLDNEKRQLQEELAKVEGRASKLDLQR 1614

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  ++ +  +L+ K   +R +     +     + L    +S +  +  +K   +K+A
Sbjct: 1615 VAMEGDLTRLQMALQEKDCSIRQLSERLENQNRALTQLEDRCTSLKSTVDQLKERLQKSA 1674

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEISRDLE 267
            VS+  L  + + + K   E        ++ L+ + +    A  E       L     +L 
Sbjct: 1675 VSETQLRGEIKTLQKELSEQGHCSQANEDKLKLLQKSLQTAENEKRILTERLDSSQTNLN 1734

Query: 268  QNQRTFADEMSKLTILEKTREQKTI 292
            + +R+   ++     L+       +
Sbjct: 1735 ELRRSQQAQLDGNQRLQDQVTDLEV 1759



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 70/199 (35%), Gaps = 6/199 (3%)

Query: 97   DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS--KVFN 154
            DL +  ++NL   +   +   D   ++    +K  +   EQ L    K     +  +   
Sbjct: 1461 DLVRKGVRNLMHQVAQLEREKDDYKSQLGAAKKQLQDAAEQQLRCDAKLSKLQAMLRNLQ 1520

Query: 155  YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
               S++    KMK++ + ++        ++  +LR  L+  +  L       E+N  ++ 
Sbjct: 1521 EEKSNLETERKMKISAIYALEEKLKQRSDECQMLRERLAQTEMQLAAT---SEENGQNEE 1577

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             L +  +   K   E R+   E   +    ++L  +  +     L  +   L++   +  
Sbjct: 1578 RLEKCRQQCSKLDNEKRQLQEELAKVEGRASKLDLQ-RVAMEGDLTRLQMALQEKDCSIR 1636

Query: 275  DEMSKLTILEKTREQKTIL 293
                +L    +   Q    
Sbjct: 1637 QLSERLENQNRALTQLEDR 1655


>gi|325201632|gb|ADY97086.1| membrane fusion protein MtrC [Neisseria meningitidis M01-240149]
 gi|325208633|gb|ADZ04085.1| membrane fusion protein MtrC [Neisseria meningitidis NZ-05/33]
          Length = 412

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 2/170 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GII+K   + GS +  G PL   +       ++  +  +   +  +   K+  D
Sbjct: 75  VRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEANLESARAQLATAQATLA--KADAD 132

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  V  +A   +E        +      K     I S   +L              
Sbjct: 133 LARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQAAIKSAGINLNRSRITAPISGFIG 192

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               ++ +LL A  ++    +     ++     S +++ +  R + +  L
Sbjct: 193 QSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKL 242


>gi|316985405|gb|EFV64353.1| chromosome segregation protein SMC [Neisseria meningitidis H44/76]
 gi|325200767|gb|ADY96222.1| chromosome segregation protein SMC [Neisseria meningitidis H44/76]
          Length = 1161

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 71/200 (35%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E   +          E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENELQVE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|294852354|ref|ZP_06793027.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
 gi|294820943|gb|EFG37942.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
          Length = 202

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 64/167 (38%), Gaps = 19/167 (11%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           Q   ++    +++ + E+      +L+P AGT+   ++    ++     P   ++     
Sbjct: 31  QQHASYLAAKAEVELAERNVRLTRVLAPFAGTVTQVENIQPGSFLAVGDPAFTLI--GAD 88

Query: 328 TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII----------SQQ 377
            ++ + +    + H+K G  ATV    Y D      +  ++ I P            +  
Sbjct: 89  AWVNSNIKETDLTHIKVGDPATVVLDSYPDQ---PLQGEVQSITPASGSVFALLPAQNAS 145

Query: 378 DNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK-NTTLA 423
            N ++  +   V +KIT       ++ +R+G  A V      + T A
Sbjct: 146 GNWVKVVQRMPVRIKITKPH---PDVVMRDGGSATVTINTGYHRTFA 189


>gi|227115328|ref|ZP_03828984.1| hypothetical protein PcarbP_20325 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 442

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 58/176 (32%), Gaps = 6/176 (3%)

Query: 26  IGIIGLITWSILL-PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPL 84
           I +  L+  + L  P+  SV +  E++     V       G+I+ F V     + +G  L
Sbjct: 180 IAVPALLLLACLFIPVRQSVLAPAEVIPHQGRVVAAPLD-GVIQSFTVLPNQSVRKGEVL 238

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           + F+        D+ + ++       + E  A      +    +   +    Q+     +
Sbjct: 239 VRFDSTTLKAQADVAERALNV----AEAEHRASSQRAFQDADSKARLDFLAAQVAQKRAE 294

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                + +    I +    + +     R +       E    L    L++ + +L 
Sbjct: 295 RDYANALLSRTEIRAERDGIAVFADATRWMGKPVRTGERLMELADPALTALRIELD 350



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/173 (11%), Positives = 54/173 (31%), Gaps = 13/173 (7%)

Query: 225 KSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            +TL+ + ++ E+     ++ E    A+ + A    +    L+      A + ++     
Sbjct: 243 STTLKAQADVAERA---LNVAEAEHRASSQRAFQDADSKARLDFLAAQVAQKRAERDYAN 299

Query: 285 KTREQKTILSPIAGT-IVYNQSFSSSNYAQQSQPLMKIV-PHSKLTYIRAKVTPKQIQHV 342
               +  I +   G  +  + +       +  + LM++  P      I   V       +
Sbjct: 300 ALLSRTEIRAERDGIAVFADATRWMGKPVRTGERLMELADPALTALRIELDVG----DAI 355

Query: 343 KKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITD 395
           +    A +       +           ++ I  + +        Y +  + TD
Sbjct: 356 RLQQEAPITL----FLDSDPLTPHAALLERIAYESEQTPAGNLAYRLDARFTD 404


>gi|171702768|dbj|BAG16352.1| myosin heavy chain [Coryphaenoides armatus]
          Length = 1933

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 8/199 (4%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
             + + + L+  ++     ++  N     L+K   + ++ L D+  KY    +++   G  
Sbjct: 1412 LEKTKQRLQGEVEDLMVDVERANGLAANLDKKQRNFDKVLADWKQKYEEGQAEL--EGAQ 1469

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               RSL  +L +M++ Y   LD  N  ++ R   +  Q+   + + + E    S ++L +
Sbjct: 1470 KEARSLSTELFKMKNSYEETLD--NLETMKRENKNLQQEISDLTEQIGETGK-SIHELEK 1526

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM- 277
             ++ V     E++  + E +  L H         LE      E+ R L +          
Sbjct: 1527 SKKQVETEKSEIQSALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQIKR 1586

Query: 278  --SKLTILEKTREQKTILS 294
               ++    +T     + S
Sbjct: 1587 NSQRIIDSMQTTLDSEVRS 1605



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 85/241 (35%), Gaps = 22/241 (9%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA----LDFLNNKYDVLEKAFESREEQLLD 140
            L  +  ++   +  +  +++ ++  ++ EKS     +D L++  + + K+  + E+    
Sbjct: 1190 LRKKQADSVAELGEQIDNLQRVKQKLEKEKSEFKMEIDDLSSNMEAVSKSKGNLEKICRT 1249

Query: 141  FLGKYHSTCSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
               +++   +K       I+ +       LT          + E   S L     +  + 
Sbjct: 1250 LEDQFNEIKAKSEENVRQINDISAQRARLLTENGEFSRQLEEKEALVSQLTRGKQASTQQ 1309

Query: 199  LTMMKNLFEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHI 244
            +  +K   E+   ++N L               +Q     ++  EL+  + +  + +   
Sbjct: 1310 IEELKRQNEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQW 1369

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQ 304
               Y+   ++    L+E  + L Q  +   +++  +     + E+      + G +    
Sbjct: 1370 RSKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQR--LQGEVEDLM 1427

Query: 305  S 305
             
Sbjct: 1428 V 1428



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 76/226 (33%), Gaps = 19/226 (8%)

Query: 74   NGSQILQGTPLLTFEDI--ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++  E+   ++ + I  K+     L   I+ E+S    L  K   L+   
Sbjct: 1054 EGDLKLAQESVMDLENEKQQSDEKIKKKEFETSQLLSKIEDEQSLGAQLQKKIKELQARI 1113

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     ++     +  +L         ++++  K       
Sbjct: 1114 EELEEEIEAERAARAKVEKQ--RADLARELEEISERLEEAGGATSAQIEMNKKREA---- 1167

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +   +   +    S  EL E I   + + + + +   E 
Sbjct: 1168 -----EFQKLRRDLEESTLQHEATASALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEF 1222

Query: 252  NLEFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQKT 291
             +E  +    +        +LE+  RT  D+ +++    +   ++ 
Sbjct: 1223 KMEIDDLSSNMEAVSKSKGNLEKICRTLEDQFNEIKAKSEENVRQI 1268


>gi|123441826|ref|YP_001005810.1| macrolide transporter subunit MacA [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088787|emb|CAL11593.1| putative HlyD family secretion protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 371

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 89/293 (30%), Gaps = 19/293 (6%)

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++         Q              V   G     R + +       +    +++ ++ 
Sbjct: 25  IIRHLMAPTPVQFQTVKVANRDLQQNVLATGKLDAVRKVDVGAQVSGQLEKLYVEIGDQV 84

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              + L     +         E    +  DLN Q     K+ L+L      ++  L  + 
Sbjct: 85  KQGQLLAMIDPQQAQNQIKEVE---ATLQDLNAQLGQ-AKAELQLAAVTLRRQQDLAKLQ 140

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
            +  +   +    L      +E          + L       +   I +P+ G +V   +
Sbjct: 141 AVSRQDLDQAITALAVKKAQVETINAQINKTKASLDTANINLDYTKISAPMDGDVVQITT 200

Query: 306 FSSSNYAQQSQP--LMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKF 363
                     Q   ++ +        + A+V+   + H+K G  A+  F    D   K+F
Sbjct: 201 LQGQTVIAAQQAPNILTLA-DMSTMLVNAQVSEADVIHLKPGMKAS--FTVLGD-PGKRF 256

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
              ++ I P   + ++ +    +Y    ++ +       + L+    A+V   
Sbjct: 257 DGALKDIQPTPEKVNDAI----FYSARFEVPNPDRL---LRLQ--MTAQVSIQ 300



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 55/133 (41%), Gaps = 6/133 (4%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           ++ +V ++G++     V ++ +  SG ++K  VE G Q+ QG  L   +  +  + I   
Sbjct: 47  LQQNVLATGKLDAVRKV-DVGAQVSGQLEKLYVEIGDQVKQGQLLAMIDPQQAQNQIKEV 105

Query: 100 KVSIKNLRCHIDTEKSALDF----LNNKYDVLEKAFESREEQLLDFLG-KYHSTCSKVFN 154
           + ++++L   +   K+ L      L  + D+ +    SR++               +  N
Sbjct: 106 EATLQDLNAQLGQAKAELQLAAVTLRRQQDLAKLQAVSRQDLDQAITALAVKKAQVETIN 165

Query: 155 YGISSVYRSLKMK 167
             I+    SL   
Sbjct: 166 AQINKTKASLDTA 178


>gi|325133939|gb|EGC56595.1| chromosome segregation protein SMC [Neisseria meningitidis M13399]
          Length = 1161

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 71/200 (35%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWQQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E   +          E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENELQVE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|308159539|gb|EFO62066.1| Axoneme-associated protein GASP-180 [Giardia lamblia P15]
          Length = 1039

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 77/205 (37%), Gaps = 12/205 (5%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            + E    I      +  LR  +D    ALD L ++ ++L+   E ++++++D        
Sbjct: 833  NSEKDKEIQGMDTELARLRLRLDESLPALDTLRSEVELLKSTMEDKDKEIVDLKNTLDER 892

Query: 149  CSKV-------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             + V        N  +  + + L +    +  +     D E   + +R      + +L  
Sbjct: 893  ATDVPIETVDALNAMLEDINQELAVSKQEVERLKDQLDDKEKSMADMRLKERQKEAELDE 952

Query: 202  MKNLFEKNAVS---QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA-- 256
            + ++ + + V      ++   +  +     +L  N  E +     + +  +E   + A  
Sbjct: 953  LSSMIQASMVGPDKAAEMTALQDEIRSLHNKLAANESEIEQTKDDLLKKQEEMERQAAAI 1012

Query: 257  NYLKEISRDLEQNQRTFADEMSKLT 281
            +Y +++  DL     T  D ++ + 
Sbjct: 1013 SYYQQLVEDLRAGIATLDDNLASIQ 1037


>gi|294649286|ref|ZP_06726721.1| Acr family acridine efflux pump AcrA [Acinetobacter haemolyticus
           ATCC 19194]
 gi|292824839|gb|EFF83607.1| Acr family acridine efflux pump AcrA [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 439

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 96/268 (35%), Gaps = 26/268 (9%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  +++        +L  + K   L A + S +++     N  +    +  +   Q  +
Sbjct: 68  SVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSVRQE-----NELKTAEANIKNQQAQLAV 122

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +  ++      Q+ M         E     A+Y    ++    N +     ++ L  
Sbjct: 123 QQANLAKVEAEYKRQQTMFSQDATSRAELESALASYKTAQAQIAAINAQIEQSRLT-LAT 181

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQ 340
            ++     +I++P+ GTIV             +Q    IV  +      ++A+++   + 
Sbjct: 182 AKEDLGYTSIVAPMDGTIVAI-VTEEGQTVNANQTAPTIVKLATLDNMTVKAQISEADVM 240

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDP---------IISQQDNNLQTQEYYEVIL 391
            V+KG   TV F    +  +K + A + +++P           +   ++  +  YY  + 
Sbjct: 241 KVEKGQ--TVYFTTLGNSEKKHY-AKLRQVEPAPNSINTETSTNSSSSSSNSAVYYNALF 297

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +      + + +LR    A+V      
Sbjct: 298 DVP-----NEDGKLRIDMTAQVYIVLAE 320



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 1/108 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G +     +V + +  SG +KK  V+ G Q+ QG  +   + +   + +   
Sbjct: 51  IENSVLATGILEA-TKMVSVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSVRQENELKTA 109

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           + +IKN +  +  +++ L  +  +Y   +  F        +      S
Sbjct: 110 EANIKNQQAQLAVQQANLAKVEAEYKRQQTMFSQDATSRAELESALAS 157


>gi|293416665|ref|ZP_06659304.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           B185]
 gi|291432021|gb|EFF05004.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           B185]
          Length = 310

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 22/188 (11%)

Query: 204 NLFEKNAVS--------QNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLE 254
            L +K  V         Q  L + +  V    +  +E   E     R  +  +  E   +
Sbjct: 67  QLVKKGQVLFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQ 126

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N L+ +   L + Q T         + +   E+  I +P  G +     ++   +  +
Sbjct: 127 ANNVLQTVLHQLAKAQATR-------DLAKLDLERTVIRAPADGWVTNLNVYT-GEFITR 178

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               + +V  +   Y+ A +   +++ V+ GY A +          K  K  ++ +   +
Sbjct: 179 GSTAVALVKQNS-FYVLAYMEETKLEGVRPGYRAEIT----PLGSNKVLKGTVDSVAAGV 233

Query: 375 SQQDNNLQ 382
           +   +   
Sbjct: 234 TNASSTRD 241



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    +   + L+ +  I     W            + +     +VV I    SG+
Sbjct: 2   KTLIRKFSRTAITVVLVILAFIAIFNAWVYYTE----SPWTRDARFSADVVAIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V +   + +G  L T +       ++  +  +   +  +  EK       N+  V
Sbjct: 58  ITQMNVHDNQLVKKGQVLFTIDQPRYQKALEEAQADVAYYQV-LAQEKRQEAGRRNRLGV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVLHQLAKAQATRDLAKL 150


>gi|229529312|ref|ZP_04418702.1| membrane-fusion protein [Vibrio cholerae 12129(1)]
 gi|229333086|gb|EEN98572.1| membrane-fusion protein [Vibrio cholerae 12129(1)]
          Length = 315

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 103/308 (33%), Gaps = 29/308 (9%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           E+  + F     +++ +   +  E +   D L K  S           +     +  L +
Sbjct: 31  ERDRITFSATSNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQKAKAQASLNK 90

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNAVSQNDLNQQERIVYKSTL 228
           + +          ++ + +A     + +LT+ +   L  K  +SQ++++        +  
Sbjct: 91  LTNGERPEDIAVAQARVAKARAQHKEAELTLNRKAELVAKRLISQSEVDAARSARDSAQA 150

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           EL     E   +                        D+EQ +   A   + +T+ ++  +
Sbjct: 151 ELASAHEEFTKLTAGAR-----------------IEDIEQAKAELAVAQANVTLQQQKLD 193

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + TIL+   G +           A  +  ++ IV   +L Y R  V          G T 
Sbjct: 194 ELTILATRDGILDSLPYHLGERVANNA--VVAIVQADRLPYARVYVPATHRAAFVVGQTV 251

Query: 349 TVRFPHYADIREKKFKAIIEKID-PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           TV      D  + K + +  +             +++  Y   + + + A S     L +
Sbjct: 252 TVHVDGIKDQYQGKIRWVANEPSFTPYYALTEKERSRLMYLAEVDLPESAMS-----LPS 306

Query: 408 GFPAEVLF 415
           G PA+V  
Sbjct: 307 GLPAQVDL 314


>gi|224538922|ref|ZP_03679461.1| hypothetical protein BACCELL_03819 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519471|gb|EEF88576.1| hypothetical protein BACCELL_03819 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 373

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 69/208 (33%), Gaps = 8/208 (3%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           +D ET  + D++    + L+   D   +  +    + D       ++ E       K ++
Sbjct: 22  DDNETQSVTDVRNAKAEQLQARADMNNAEAEAQKIQADAEAALMTAKAEAQKAAAAKVNA 81

Query: 148 TCSKVF-NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               +     +  + +           I   R  +E +++L    ++  Q +  + +   
Sbjct: 82  EAETIKKRTELVELQKEAAGLENDAAKIENKRKQVELETALANLEVTKKQAEKDLAELAA 141

Query: 207 EKNAVSQN---DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-- 261
               ++QN   +L + ++ +  +   L +   +         +   EA       L    
Sbjct: 142 RMELMAQNNQIELLKLQKRLANAQKALVDYNKQLAAAATQAEKDKLEAEQRKLKRLSNKY 201

Query: 262 --ISRDLEQNQRTFADEMSKLTILEKTR 287
               + L + Q T AD  + L  LE   
Sbjct: 202 FAAVQTLIEAQNTLADSKAVLVELESGL 229



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 65/213 (30%), Gaps = 13/213 (6%)

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            I + T L+  +        D  K+  K  +  ++T  + L+    + +       +R E
Sbjct: 85  TIKKRTELVELQKEAAGLENDAAKIENKRKQVELETALANLEVTKKQAEKDLAELAARME 144

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS--SLLRALLSS 194
            +            K       ++    K           ++L+ E +    L     ++
Sbjct: 145 LMAQNNQIELLKLQKRLANAQKALVDYNKQLAAAATQAEKDKLEAEQRKLKRLSNKYFAA 204

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            Q  +     L +  AV    L + E  +        + I E  N +           + 
Sbjct: 205 VQTLIEAQNTLADSKAV----LVELESGLISDQAAKEKAIAENNNTIAMY-------QMR 253

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            A Y +  +   ++   T  ++  +L+  +   
Sbjct: 254 IAKYKEYTNYKTDEEILTLTNKEEELSKQQDLL 286


>gi|188995903|ref|YP_001930155.1| hypothetical protein PGN_2040 [Porphyromonas gingivalis ATCC 33277]
 gi|188595583|dbj|BAG34558.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 331

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 79/215 (36%), Gaps = 17/215 (7%)

Query: 5   MWKNLKRNH--PASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSP 62
           M  N +RN   PA L  + +++++ I+G      L P E  +   G+I   +    + S 
Sbjct: 1   MTDNKQRNIVFPAFLLLLGVIAVVTIVGFFM---LRPAEEII--QGQIEATEYR--VSSK 53

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFE--DIETTDLIDLKKVSIKNLRCHIDTEKSALDFL 120
             G IK+ +V  G Q+  G  L   E  D+           +    +     + +  + +
Sbjct: 54  VPGRIKELRVSEGQQVQAGDTLAVIEAPDVAAKMEQAKAAEAAAQAQNAKALKGARSEQI 113

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
              Y++ +KA     +  +    K H     +++ G+    + L     +  +    +  
Sbjct: 114 QAAYEMWQKA-----QAGVAIATKTHQRVQNLYDQGVVPAQK-LDEATAQRDAAIATQKA 167

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
            E + ++ R       K          + AV++ +
Sbjct: 168 AEAQYNMARNGAEREDKLAASALVDRARGAVAEVE 202



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 68/237 (28%), Gaps = 25/237 (10%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +   + I   ++     R          +   ++   ++        +  D   K     
Sbjct: 32  LRPAEEIIQGQIEATEYRVSSKVPGRIKELRVSEGQQVQAGDTLAVIEAPDVAAKMEQAK 91

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +        +       +  ++++ Y             +A ++   K    ++NL+++ 
Sbjct: 92  AAEAAAQAQNAKALKGARSEQIQAAY-------EMWQKAQAGVAIATKTHQRVQNLYDQG 144

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V    L++       +T +    I  QK      N   + A  E     K  +  L   
Sbjct: 145 VVPAQKLDE-------ATAQRDAAIATQKAAEAQYNMARNGAERE----DKLAASALVDR 193

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
            R    E+      E    +  +++P AG +       +        P+M I     
Sbjct: 194 ARGAVAEV------ESYINETYLIAPRAGEVSEI-FPKAGELVGTGAPIMNIAEMGD 243


>gi|167588387|ref|ZP_02380775.1| efflux transporter, RND family, MFP subunit [Burkholderia ubonensis
           Bu]
          Length = 365

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/200 (13%), Positives = 59/200 (29%), Gaps = 17/200 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V+ + ++  + +V       +  +   +    +    +  A     N   E     +  
Sbjct: 83  FVAGSRVSAGQPLVQLYDAPEQAKLAGLQAKADYTRRQFARAEQLVPNG-AEPKATFDAR 141

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +       + +   +    QK I +P +G I   +  +   Y      +  +       +
Sbjct: 142 RYELDAARADIRETQAVITQKLIRAPFSGVI-GLRRVNLGQYLNPGDAIATLT-DLDALH 199

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEV 389
               V  K +  V  G    V    Y       F+  +  I+P +  +  N+  Q     
Sbjct: 200 ANFTVPQKALSRVALGQAVRVTTDAYPGRT---FEGRVTAIEPQVGDETRNITVQ----- 251

Query: 390 ILKITDLAFSDNNIELRNGF 409
                    ++ +  LR G 
Sbjct: 252 ------ATVANADQLLRPGM 265



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 59/197 (29%), Gaps = 5/197 (2%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +     V  I    +G +   +   GS++  G PL+   D      +   +     
Sbjct: 58  AVGSLEAVRQV-TIAPEVAGRVVDIRFVAGSRVSAGQPLVQLYDAPEQAKLAGLQAKADY 116

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            R     + +  + L       +  F++R  +L         T + +    I + +  + 
Sbjct: 117 TR----RQFARAEQLVPNGAEPKATFDARRYELDAARADIRETQAVITQKLIRAPFSGVI 172

Query: 166 MKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
                    YLN  D     + L AL ++       +  +    AV         R    
Sbjct: 173 GLRRVNLGQYLNPGDAIATLTDLDALHANFTVPQKALSRVALGQAVRVTTDAYPGRTFEG 232

Query: 226 STLELRENIHEQKNMLR 242
               +   + ++   + 
Sbjct: 233 RVTAIEPQVGDETRNIT 249


>gi|163753592|ref|ZP_02160715.1| cation efflux system protein/acriflavin resistance protein B family
           [Kordia algicida OT-1]
 gi|161325806|gb|EDP97132.1| cation efflux system protein/acriflavin resistance protein B family
           [Kordia algicida OT-1]
          Length = 389

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 60/169 (35%), Gaps = 3/169 (1%)

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           + ++  V +     + +I+ +           Q  +   + +   E      +       
Sbjct: 110 ILKQVFVKEGQRVAKGQILARVDDNGLSQQLSQLQIQADLAKTTFERQKRLWDQKIGSEI 169

Query: 265 DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ-PLMKIVP 323
              Q +  +  +   +  L+    +  I +P +G +V +      +     Q P+++IV 
Sbjct: 170 QFLQTKSAYESQQKAVDQLKIQLGKTAIRAPFSG-VVDDVITEQGSVVGAGQTPIIRIVN 228

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP 372
                YI A +  K + +V +G    V FP      + K +   + IDP
Sbjct: 229 LRD-MYIEAVIPEKYLTNVTEGKDVEVYFPVLGKTIDAKIRQAGDFIDP 276



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 47/110 (42%), Gaps = 4/110 (3%)

Query: 52  NEDNVVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
            +     + +P  SGI+K+  V+ G ++ +G  L   +D   +  +   ++     +   
Sbjct: 95  VDTKKNIVITPEMSGILKQVFVKEGQRVAKGQILARVDDNGLSQQLSQLQIQADLAKTTF 154

Query: 111 DTEKSALDF-LNNKYDVLE--KAFESREEQLLDFLGKYHSTCSKVFNYGI 157
           + +K   D  + ++   L+   A+ES+++ +     +   T  +    G+
Sbjct: 155 ERQKRLWDQKIGSEIQFLQTKSAYESQQKAVDQLKIQLGKTAIRAPFSGV 204


>gi|118098817|ref|XP_415277.2| PREDICTED: similar to rho/rac-interacting citron kinase [Gallus
           gallus]
          Length = 2027

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 16/217 (7%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L   E+    DL D  K +++N+    + E      +  +   +  A +S+   L   + 
Sbjct: 725 LKVLENQMKKDLAD--KEALENMLRRHEEEAREKCKVLAEQKAMINAMDSKIRSLEQRIV 782

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +         N  + +  R++K +   +  +   +  LE ++  L A     ++ L   +
Sbjct: 783 ELSEANKLAANSSLFT-QRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQL---E 838

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
            +  ++   +N L + E  + +  LE  E   E K  L  +     E   +         
Sbjct: 839 KMSHQDHTDKNRLLELETRLREVGLEHEEQKLELKRQLTELQLTLQERESQITGLQAART 898

Query: 256 --ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              N L+E   +LE+      +E+  LT      ++K
Sbjct: 899 ALENQLREAKTELEETTAEAEEEIQALTAHRDEIQRK 935



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 90/268 (33%), Gaps = 25/268 (9%)

Query: 39   PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
             ++ +  ++ E++      E+        ++          Q   +   +   T  +++ 
Sbjct: 973  QLDEASGANDEVV--QLRSEVDHLR----REITEREMQLTSQKQTMEALKTTCT--MLEE 1024

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN---- 154
            + + ++ L   +  ++   +   N     +  FE R  +L   L     +  +       
Sbjct: 1025 QVMDLEALNDELLEKERQWEAWRNVLGDEKSQFECRVRELQRMLDTEKQSRVRADQRITE 1084

Query: 155  -------------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                           I ++ ++LK +  +  S+     DLE K ++L     S Q+ L  
Sbjct: 1085 SRQVVELAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQKLET 1144

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             + L ++    Q  L QQ  +       L + + E  +    +     +   +  N    
Sbjct: 1145 ERELKQRLLEEQAKLQQQMDLQKNHIFRLTQGLQEALDRADLLKTERSDLEYQLENIQVL 1204

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQ 289
             S +  + + T + +   +  L+   +Q
Sbjct: 1205 YSHEKVKMEGTISQQTKLIDFLQAKMDQ 1232



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 78/231 (33%), Gaps = 22/231 (9%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA- 130
           V++  +   G      E I T     ++++  K  +  +     A + L N     E+A 
Sbjct: 612 VKDQGKSEAGELYCKLEKINTEQQAKIQELQEKLTKA-VKASSEATELLQNIRQAKERAE 670

Query: 131 -----FESREEQLLDFLGKYHSTCSKVFNYGISSVYRS-LKMKLTRMRSIYLNRL----- 179
                 ++RE+       K          +  + +    L+++L +    Y  +L     
Sbjct: 671 KELEKLQNREDSNESMKKKLLEAEELEEKHREAQISAQHLELQLKQKEQFYEEKLKVLEN 730

Query: 180 ----DLENKSSLLRALLSSHQKDLTMMKNLFEKNAV-----SQNDLNQQERIVYKSTLEL 230
               DL +K +L   L    ++     K L E+ A+     S+    +Q  +      +L
Sbjct: 731 QMKKDLADKEALENMLRRHEEEAREKCKVLAEQKAMINAMDSKIRSLEQRIVELSEANKL 790

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             N            E       +   YL+  +  LE   R   +++ K++
Sbjct: 791 AANSSLFTQRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQLEKMS 841



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 72/247 (29%), Gaps = 40/247 (16%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-----------LDFLNNKYDVLEKAFES 133
            L     E    I   + +   L   +   K+            +  L    D +++ FE+
Sbjct: 879  LQLTLQERESQITGLQAARTALENQLREAKTELEETTAEAEEEIQALTAHRDEIQRKFEA 938

Query: 134  REE------QLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                      L + L +     +++ N    +S            +  +      L  + 
Sbjct: 939  LRNSCTVITDLEEQLNQLSEDNAELNNQNFFLSKQLDEASGANDEVVQLRSEVDHLRREI 998

Query: 186  SLLRALLSSHQKDLTMMKN---LFEKNAVSQN----DLNQQERIVYK------------- 225
            +     L+S ++ +  +K    + E+  +       +L ++ER                 
Sbjct: 999  TEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDELLEKERQWEAWRNVLGDEKSQFE 1058

Query: 226  -STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                EL+  +  +K      ++   E+       +KE   ++   Q+   ++  K   L 
Sbjct: 1059 CRVRELQRMLDTEKQSRVRADQRITESRQVVELAVKEHKAEILALQQALKEQKLKAESLS 1118

Query: 285  KTREQKT 291
                   
Sbjct: 1119 DKLNDLE 1125


>gi|109113169|ref|XP_001111510.1| PREDICTED: centrobin-like isoform 1 [Macaca mulatta]
          Length = 923

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 71/218 (32%), Gaps = 13/218 (5%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           LT             +      R    +E   L+ L    +   + +  +E QL +    
Sbjct: 314 LTLSLEAEQQRCCALQEERDAARAGQLSEHRELETLRAAIEEERQTWAQQEHQLKEHYQA 373

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD---LENKSSLLRALLSSHQKDLTM 201
                            R  +        + L + +   LE +    R    + Q ++++
Sbjct: 374 LQEENQAQLEREKEKSQREAQAAWEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSL 433

Query: 202 MKNLFEKNAVS-------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           ++  +E   +        Q +    ER+       LR+    +++  + + +L  +   E
Sbjct: 434 VQARYESQRIQLESELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLSGQHQQE 493

Query: 255 FANYLKEIS---RDLEQNQRTFADEMSKLTILEKTREQ 289
            A+ L +      + E+ Q+  A++       E+ R +
Sbjct: 494 LASQLAQFKVEMAEREERQQQVAEDYELRLAREQARVR 531



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/202 (10%), Positives = 62/202 (30%), Gaps = 2/202 (0%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                 +     ++   +     ++   + L  +   L  + E+ +++      +  +  
Sbjct: 277 TRLEQSLSEAMEALNREQESARLQQRERETLEEERQALTLSLEAEQQRCCALQEERDAAR 336

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +   +           ++  R           E+  +L     +  +++    +   +  
Sbjct: 337 AGQLSEHRELETLRAAIEEERQTWAQQEHQLKEHYQALQEENQAQLEREKEKSQREAQAA 396

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ- 268
             +Q+ L   +  V +   EL     E+  +   ++ +      +      E++  LEQ 
Sbjct: 397 WEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARYESQRIQLESELAVQLEQR 456

Query: 269 -NQRTFADEMSKLTILEKTREQ 289
             +R    + S L      RE 
Sbjct: 457 VTERLAQAQESSLRQAASLREH 478


>gi|45170566|gb|AAS55383.1| membrane fusion protein SdeA [Serratia marcescens subsp. marcescens
           ATCC 13880]
          Length = 395

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 45/129 (34%), Gaps = 4/129 (3%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +    +V  ++   SG I++     G ++ +G  L T +D       +  +  +   R
Sbjct: 70  GRVEAVQSVQ-LRPRVSGYIERVNYTEGDEVKKGQVLFTIDDRTYRAAREQAQAELVRAR 128

Query: 108 CHID---TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSL 164
                  +E S  + L     + ++ +E R            +  +++    ++  +  +
Sbjct: 129 NQAALARSESSRTEKLIGTQAISQEVWEQRRSSAAQAQSNVLAAQAQLDMAQLNLDFTRV 188

Query: 165 KMKLTRMRS 173
              +    S
Sbjct: 189 TAPIDGRAS 197



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 25/99 (25%), Gaps = 1/99 (1%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           +  R   ++ L    N            E             ++      Q Q       
Sbjct: 114 RAAREQAQAELVRARNQAALARSESSRTEKLIGTQAISQEVWEQRRSSAAQAQSNVLAAQ 173

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
           ++L + +   +   + +PI G        ++ N      
Sbjct: 174 AQLDMAQLNLDFTRVTAPIDGRASRAMI-TAGNLVTAGD 211


>gi|17978023|emb|CAC85955.1| nonmuscle heavy chain myosin II-A [Mus musculus]
          Length = 1960

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/209 (11%), Positives = 69/209 (33%), Gaps = 5/209 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +D   +   +      K     + + ++ +  L  +    E+A    +++  +   + 
Sbjct: 1653 ELDDTRASR--EEILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEI 1710

Query: 146  HSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             ++  K  +       +   + +    +     N   + ++       +     DL + +
Sbjct: 1711 ANSSGKGALALEEKRRLEARIALLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLER 1770

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEI 262
            +  +KN  ++  L +Q + +     E+   +  + K  +  +     +   +  N  KE 
Sbjct: 1771 SHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAALEAKIAQLEEQLDNETKER 1830

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +Q +RT       L  +E  R    
Sbjct: 1831 QAASKQVRRTEKKLKDVLLQVEDERRNAE 1859



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 68/199 (34%), Gaps = 5/199 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ ++  ++  N K    +K  E R  +    L +     SK
Sbjct: 958  ARQKLQLEKVTTEAKLKKLEEDQIIMEDQNCKLAKEKKLLEDRVAEFTTNLME-EEEKSK 1016

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +     +     R+R     R +LE     L    +     +     L  + A 
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIA---ELQAQIAE 1073

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +  L ++E  +  +   + E   ++   L+ I EL  +   E    L+       + ++
Sbjct: 1074 LKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELETQI-SELQEDLESERASRNKAEK 1132

Query: 272  TFADEMSKLTILEKTREQK 290
               D   +L  L+   E  
Sbjct: 1133 QKRDLGEELEALKTELEDT 1151



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 72/225 (32%), Gaps = 37/225 (16%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
               + LR  +  +K  L+ + +  +   +  E R + L     K      ++        
Sbjct: 897  AEAEELRARLTAKKQELEEICHDLEARVEEEEERCQYLQAEKKKMQQNIQELEEQLEEEE 956

Query: 161  YRSLKMKLT----------------------------------RMRSIYLNRLDLENKSS 186
                K++L                                   R+     N ++ E KS 
Sbjct: 957  SARQKLQLEKVTTEAKLKKLEEDQIIMEDQNCKLAKEKKLLEDRVAEFTTNLMEEEEKSK 1016

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L  L + H+  +T ++    +    + +L +  R +   + +L + I E +  +  +  
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKM 1076

Query: 247  LYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTRE 288
               +   E    L  +  +  Q     +   +  ++++ L++  E
Sbjct: 1077 QLAKKEEELQAALARVEEEAAQKNMALKKIRELETQISELQEDLE 1121



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 70/187 (37%), Gaps = 1/187 (0%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            S+  L       +  ++ +  + + LE   ++ E+  L       +  ++          
Sbjct: 1519 SVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDE 1578

Query: 162  RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
            +S + K   +R +     +LE++       +++ +K    +K+L      +  +  +  +
Sbjct: 1579 QSEEKKKQLVRQVREMEAELEDERKQRSMAMAARKKLEMDLKDLEAHIDTANKNREEAIK 1638

Query: 222  IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             + K   ++++ + E  +      E+  +A  E    LK +  ++ Q Q   A       
Sbjct: 1639 QLRKLQAQMKDCMRELDDTRASREEILAQAK-ENEKKLKSMEAEMIQLQEELAAAERAKR 1697

Query: 282  ILEKTRE 288
              ++ R+
Sbjct: 1698 QAQQERD 1704



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 79/237 (33%), Gaps = 16/237 (6%)

Query: 73   ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             +     +   L+        +L D +K     +      E   L  L    D   K  E
Sbjct: 1576 RDEQSEEKKKQLVRQVREMEAELEDERKQRSMAMAARKKLEMD-LKDLEAHIDTANKNRE 1634

Query: 133  SREEQLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               +QL     +      ++ +       +    K    +++S+    + L+ + +    
Sbjct: 1635 EAIKQLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMIQLQEELAAAER 1694

Query: 191  LLSSHQKDLTMMKNLFE----KNAVSQNDLNQQERIVYKSTLELRENIH-------EQKN 239
                 Q++   + +       K A++  +  + E  +     EL E            K 
Sbjct: 1695 AKRQAQQERDELADEIANSSGKGALALEEKRRLEARIALLEEELEEEQGNTELINDRLKK 1754

Query: 240  MLRHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                I+++  + NLE ++  K     + LE+  +    ++ ++    K++ + +I +
Sbjct: 1755 ANLQIDQINTDLNLERSHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAA 1811



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 17/218 (7%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             D+E     + ++            +         + +   +     E+   +   K   
Sbjct: 918  HDLEARVEEEEERCQYLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLE 977

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
                +       + +  K+   R+     N ++ E KS  L  L + H+  +T ++    
Sbjct: 978  EDQIIMEDQNCKLAKEKKLLEDRVAEFTTNLMEEEEKSKSLAKLKNKHEAMITDLEERLR 1037

Query: 208  KNAVSQNDLNQQER-------IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY-- 258
            +    + +L +  R        +     EL+  I E K  L    E    A         
Sbjct: 1038 REEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAA 1097

Query: 259  --------LKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                    ++E+   + + Q     E +     EK + 
Sbjct: 1098 QKNMALKKIRELETQISELQEDLESERASRNKAEKQKR 1135



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 75/210 (35%), Gaps = 12/210 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +  D  +   +       +   AL+    +   LE+  +    ++ D +         V
Sbjct: 1461 AEERDRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSV 1520

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                    ++ + ++   T++  +       E+    L   L + +      ++L  ++ 
Sbjct: 1521 HELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFE--RDLQGRDE 1578

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY-----DEANLEFANY-LKEISR 264
             S+    Q  R V +   EL +   ++   +    +L       EA+++ AN   +E  +
Sbjct: 1579 QSEEKKKQLVRQVREMEAELEDERKQRSMAMAARKKLEMDLKDLEAHIDTANKNREEAIK 1638

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILS 294
             L + Q    D M +L   +    ++ IL+
Sbjct: 1639 QLRKLQAQMKDCMRELD--DTRASREEILA 1666



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 70/196 (35%), Gaps = 14/196 (7%)

Query: 98   LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF-----LGKYHSTCSKV 152
            L     + L   I   +  L+      +++    +    Q+        L + H+  ++ 
Sbjct: 1719 LALEEKRRLEARIALLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLERSHAQKNEN 1778

Query: 153  FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                +    + LK KL  M S   ++   +   + L A ++  ++ L       E+ A S
Sbjct: 1779 ARQQLERQNKELKAKLQEMESAVKSK--YKASIAALEAKIAQLEEQLDNETK--ERQAAS 1834

Query: 213  QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
            +  + + E+ +    L+    + +++       +  D+A+       +++    E+ QR 
Sbjct: 1835 K-QVRRTEKKLKDVLLQ----VEDERRNAEQFKDQADKASTRLKQLKRQLEEAEEEAQRA 1889

Query: 273  FADEMSKLTILEKTRE 288
             A        LE   E
Sbjct: 1890 NASRRKLQRELEDATE 1905


>gi|15803775|ref|NP_289809.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli O157:H7
           EDL933]
 gi|15833368|ref|NP_312141.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli O157:H7
           str. Sakai]
 gi|168752146|ref|ZP_02777168.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4113]
 gi|168754223|ref|ZP_02779230.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4401]
 gi|168763778|ref|ZP_02788785.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4501]
 gi|168769097|ref|ZP_02794104.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4486]
 gi|168777636|ref|ZP_02802643.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4196]
 gi|168781385|ref|ZP_02806392.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4076]
 gi|168786127|ref|ZP_02811134.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC869]
 gi|168800954|ref|ZP_02825961.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC508]
 gi|195939439|ref|ZP_03084821.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli O157:H7
           str. EC4024]
 gi|208808467|ref|ZP_03250804.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4206]
 gi|208814113|ref|ZP_03255442.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4045]
 gi|208818730|ref|ZP_03259050.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4042]
 gi|209396247|ref|YP_002272704.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4115]
 gi|217327551|ref|ZP_03443634.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. TW14588]
 gi|254795184|ref|YP_003080021.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli O157:H7
           str. TW14359]
 gi|261228246|ref|ZP_05942527.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261255102|ref|ZP_05947635.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Escherichia coli
           O157:H7 str. FRIK966]
 gi|60389414|sp|Q8X9E5|AAEA_ECO57 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|226706818|sp|B5YSW7|AAEA_ECO5E RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|12517862|gb|AAG58369.1|AE005551_12 putative membrane protein [Escherichia coli O157:H7 str. EDL933]
 gi|13363587|dbj|BAB37537.1| putative membrane protein [Escherichia coli O157:H7 str. Sakai]
 gi|187767157|gb|EDU31001.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4196]
 gi|188013935|gb|EDU52057.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4113]
 gi|189000971|gb|EDU69957.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4076]
 gi|189358572|gb|EDU76991.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4401]
 gi|189361751|gb|EDU80170.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4486]
 gi|189366108|gb|EDU84524.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4501]
 gi|189374192|gb|EDU92608.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC869]
 gi|189376820|gb|EDU95236.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC508]
 gi|208728268|gb|EDZ77869.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4206]
 gi|208735390|gb|EDZ84077.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4045]
 gi|208738853|gb|EDZ86535.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4042]
 gi|209157647|gb|ACI35080.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. EC4115]
 gi|209747516|gb|ACI72065.1| putative membrane protein [Escherichia coli]
 gi|209747518|gb|ACI72066.1| putative membrane protein [Escherichia coli]
 gi|209747520|gb|ACI72067.1| putative membrane protein [Escherichia coli]
 gi|217319918|gb|EEC28343.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O157:H7 str. TW14588]
 gi|254594584|gb|ACT73945.1| p-hydroxybenzoic acid efflux pump subunit AaeA [Escherichia coli
           O157:H7 str. TW14359]
 gi|320189588|gb|EFW64247.1| Fusaric acid resistance protein fusE [Escherichia coli O157:H7 str.
           EC1212]
 gi|326337936|gb|EGD61770.1| Fusaric acid resistance protein fusE [Escherichia coli O157:H7 str.
           1125]
 gi|326347505|gb|EGD71230.1| Fusaric acid resistance protein fusE [Escherichia coli O157:H7 str.
           1044]
          Length = 309

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 66/194 (34%), Gaps = 22/194 (11%)

Query: 198 DLTMMKNLFEKNAVS--------QNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELY 248
            + +   L +K  V         Q  L + +  V    +  +E   E     R  +  + 
Sbjct: 60  QVNVHNQLVKKGQVLFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMS 119

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
            E   +  N L+ +   L + Q T         + +   E+  I +P  G +     ++ 
Sbjct: 120 REEIDQANNVLQTVLHQLAKAQATR-------DLAKLDLERTVIRAPADGWVTNLNVYT- 171

Query: 309 SNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIE 368
             +  +    + +V  +   Y+ A +   +++ V+ GY A +          K  K  ++
Sbjct: 172 GEFITRGSTAVALVKQNS-FYVLAYMEETKLEGVRPGYRAEIT----PLGSNKVLKGTVD 226

Query: 369 KIDPIISQQDNNLQ 382
            +   ++   +   
Sbjct: 227 SVAAGVTNASSTRD 240



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 48/154 (31%), Gaps = 6/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    +   + L+ +  I     W            + +     +VV I    SG+
Sbjct: 2   KTLIRKFSRTAITVVLVILAFIAIFNAWVYYTE----SPWTRDARFSADVVAIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V N   + +G  L T +       ++  +  +   +  +  EK       N+  V
Sbjct: 58  ITQVNVHN-QLVKKGQVLFTIDQPRYQKALEEAQADVAYYQV-LAQEKRQEAGRRNRLGV 115

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 116 QAMSREEIDQANNVLQTVLHQLAKAQATRDLAKL 149


>gi|117925800|ref|YP_866417.1| RND family efflux transporter MFP subunit [Magnetococcus sp. MC-1]
 gi|117609556|gb|ABK45011.1| efflux transporter, RND family, MFP subunit [Magnetococcus sp.
           MC-1]
          Length = 354

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/278 (10%), Positives = 79/278 (28%), Gaps = 19/278 (6%)

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
             G       +    G+     +L +   +++   L  +  E         L        
Sbjct: 19  LAGGQQVRAKQAAPSGVKGGEPALTLPRVQVKQFALQSIQREIVLQGQTQPLRVATLKSE 78

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
               +    A     + +    +   + E R              E    A         
Sbjct: 79  TTGRVVALPAERGQRV-ELGAALVHLSPEDRGARRRLAQAGVAQAEAALFAAKALNKKGY 137

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMK 320
           +    +++        +++L  +E   +   + +P AG +V  +      Y      +++
Sbjct: 138 QADLQVKEANAQQQGALAELAAIELDIQHTILQAPFAG-VVRERFVELGEYVAPGDAVVE 196

Query: 321 IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           ++       + A +  +++  +  G            +  ++    +  I P+   Q   
Sbjct: 197 LL-DDSSVKVVADLPQQKLSSIHVGMVGQA-----NWLDGRRRSGAVGYISPLADAQTRT 250

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
                 Y V L++ +    D  + L  G   E++ +  
Sbjct: 251 ------YRVELRVDNP---DGTLPL--GASVEIVLSLG 277


>gi|300770423|ref|ZP_07080302.1| RND family efflux transporter [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300762899|gb|EFK59716.1| RND family efflux transporter [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 417

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 14/204 (6%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL--RCHIDTEKSALDFLN 121
            G +++  VE+G+ + +G P++   + +    +  ++ S+ NL  +  I    +    +N
Sbjct: 81  GGRVEEKYVEDGAFLKKGDPIMRLSNTDQELSLVNQETSVLNLLTQSQIAQTNAQQVSIN 140

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM----RSIYLN 177
           N+  + +     +E Q +  L K       + +            +  RM    + +  +
Sbjct: 141 NRNQLADVDNGLKEAQRIYQLNKKLFEEKAIGSQEYQKTVNDYLYQKERMELTRKILQQD 200

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            L    K    R +    Q+ L +M+         + D       V          I + 
Sbjct: 201 SLSTNQKVKQDRQMYERTQRALELMRK--------KVDDLVVRAPVDGQLTSFDSEIGQN 252

Query: 238 KNMLRHINELYDEANLEFANYLKE 261
           KN    + ++      +    + E
Sbjct: 253 KNSGERLGQIDVLTGFKVRADVDE 276



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 67/211 (31%), Gaps = 26/211 (12%)

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
           ++          +SV   L        +     ++  N+ + +   L   Q+   + K L
Sbjct: 106 NTDQELSLVNQETSVLNLLTQSQIAQTNAQQVSINNRNQLADVDNGLKEAQRIYQLNKKL 165

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           FE+ A+   +  +                  QK  +    ++  + +L     +K+  + 
Sbjct: 166 FEEKAIGSQEYQKTVNDYLY-----------QKERMELTRKILQQDSLSTNQKVKQDRQM 214

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS 325
            E+ QR        L ++ K  +   + +P+ G +    S          + L +I    
Sbjct: 215 YERTQRA-------LELMRKKVDDLVVRAPVDGQLTSFDS-EIGQNKNSGERLGQI---- 262

Query: 326 KLTY---IRAKVTPKQIQHVKKGYTATVRFP 353
            +     +RA V    I  +      ++   
Sbjct: 263 DVLTGFKVRADVDEHYISRIYNDLQGSINIS 293


>gi|254516128|ref|ZP_05128188.1| efflux transporter, RND family, MFP subunit [gamma proteobacterium
           NOR5-3]
 gi|219675850|gb|EED32216.1| efflux transporter, RND family, MFP subunit [gamma proteobacterium
           NOR5-3]
          Length = 356

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 54/191 (28%), Gaps = 25/191 (13%)

Query: 236 EQKNMLRHINELYDEANLEFANYLK-----EISRDLEQNQRTFADEMSKLTILEKTREQK 290
           EQ  +LR       E  L+    L        + +++  +       + L  L      +
Sbjct: 97  EQLALLREAEAKLRETELQLNRLLTLGKDIATAAEIDVARARVDANAALLEALRSRIADR 156

Query: 291 TILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAKVTPKQIQHVKKGYTA 348
           TI +P  G ++  +  S          + ++          +   +    +  +K G   
Sbjct: 157 TIRAPFDG-VLGLRRISVGALLTPGTVIAEL---DDINPMKLDFTLPEHYLSQIKIGEVV 212

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNG 408
           +     +     + F   + +I   +            + V   I      + +  LR G
Sbjct: 213 SAASTAWD---GEVFSGQVTQIGSRVDPATRA------FSVRALID-----NADARLRPG 258

Query: 409 FPAEVLFTAKN 419
               V  +   
Sbjct: 259 MLMAVKVSLGE 269



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 36/117 (30%), Gaps = 2/117 (1%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFL--NNKY 124
           +     E G  +  G  L+   D+E   L+   +  ++     ++   +    +    + 
Sbjct: 73  VSAVYFEGGELVKAGDVLVELIDVEQLALLREAEAKLRETELQLNRLLTLGKDIATAAEI 132

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
           DV     ++    L     +      +    G+  + R     L    ++     D+
Sbjct: 133 DVARARVDANAALLEALRSRIADRTIRAPFDGVLGLRRISVGALLTPGTVIAELDDI 189


>gi|254475258|ref|ZP_05088644.1| hypothetical protein RR11_1093 [Ruegeria sp. R11]
 gi|214029501|gb|EEB70336.1| hypothetical protein RR11_1093 [Ruegeria sp. R11]
          Length = 439

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 88/300 (29%), Gaps = 15/300 (5%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLIT------WSILLPIEISVSSSGEILNEDNVVEIKS 61
           NL         R   L     +  +       W +           G +    + ++++ 
Sbjct: 7   NLPPRERGGWGRWLWLMAACAVMALLIAPAAQWLVEAKAPGQRRFDGTLSPGTHQIDLRL 66

Query: 62  PFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN 121
           P    +       G ++  G  +   +  + T   D+ +  I      ++    A     
Sbjct: 67  PAGVPLTAVLTSAGQEVSAGETIALLDLPKITARADMLRRHI-----RVNAALRACLMDA 121

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
              DVL +     +                    G        ++ L   R+    +   
Sbjct: 122 GHADVLLQQIREEQSAPTAGTASPLPESGARHAVGSDLPLNQQELSLQLQRTAETCKNTH 181

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
              +   R LL++ +      + L  + A         +  V    L L     +++   
Sbjct: 182 NEAALHQRKLLNALEDLRAKSRRLALRAATPPTG----DEDVRSQRLRLISLALDREQTS 237

Query: 242 RHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIV 301
           + I ++  + +       +   R ++Q ++    ++ +L IL        + +P +G I+
Sbjct: 238 KSIAQMELQLSALATEQTRANLRRVQQLEQDAQRQIGELEILMSYAATPRLYAPQSGIIL 297


>gi|153801572|ref|ZP_01956158.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124122899|gb|EAY41642.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 315

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 103/308 (33%), Gaps = 29/308 (9%)

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLL--DFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           E+  + F     +++ +   +  E +   D L K  S           +     +  L +
Sbjct: 31  ERDRITFSATSNEIIRELPIAEGEHVKVGDVLVKLDSQIQTTLLTQALAQQAKAQASLNK 90

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--NLFEKNAVSQNDLNQQERIVYKSTL 228
           + +          ++ + +A     + +LT+ +   L  K  +SQ++++        +  
Sbjct: 91  LTNGERPEDIAVAQARVAKARAQHKEAELTLNRKAELVAKRLISQSEVDAARSARDSAQA 150

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           EL     E   +                        D+EQ +   A   + +T+ ++  +
Sbjct: 151 ELASAHEEFTKLTAGAR-----------------IEDIEQAKAELAVAQANVTLQQQKLD 193

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
           + TIL+   G +           A  +  ++ IV   +L Y R  V          G T 
Sbjct: 194 ELTILATRDGILDSLPYHLGERVANNA--VVAIVQADRLPYARVYVPATHRAAFVVGQTV 251

Query: 349 TVRFPHYADIREKKFKAIIEKID-PIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRN 407
           TV      D  + + + +  +             +++  Y   + + + A      +L +
Sbjct: 252 TVHVDGIKDQYQGRIRWVANEPSFTPYYALTEKERSRLMYLAEVDLPESAM-----DLPS 306

Query: 408 GFPAEVLF 415
           G PA+V  
Sbjct: 307 GLPAQVDL 314


>gi|325923515|ref|ZP_08185165.1| RND family efflux transporter, MFP subunit [Xanthomonas gardneri
           ATCC 19865]
 gi|325546012|gb|EGD17216.1| RND family efflux transporter, MFP subunit [Xanthomonas gardneri
           ATCC 19865]
          Length = 307

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 71/217 (32%), Gaps = 19/217 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V +            +  E +  + + +  +     L D    E A   +    ++++ 
Sbjct: 77  VVDRARYAIALEQARAALAERQATLSQLRREIARDRSLQDLVAAEDAEVRR---SNVQKA 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   A   S + + +   ++  + SP  G +   ++    +Y      ++ ++  +    
Sbjct: 134 QAAVATAQSAVDLAQLNLDRTQVRSPADGHVSD-RTVRVGDYVSAGHAVVAVL-DTGSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQD 378
           +       ++  V  G    VR            ++I   I+           P ++   
Sbjct: 192 VDGYFEETRLHGVHAGQRVDVRLMGEPVTLHGHVQSIAAGIEDRYRSGSAGALPNVTPAF 251

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + ++  +   V + + ++     +++L  G  A V  
Sbjct: 252 DWVRLAQRIPVRIVLDEM---PKHVQLIAGRTATVTI 285



 Score = 43.1 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 12/108 (11%), Positives = 38/108 (35%), Gaps = 1/108 (0%)

Query: 52  NEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHID 111
              +VV++    SG+++   V +   + +G  L   +       ++  + ++   +  + 
Sbjct: 43  VGADVVQVAPDVSGLVESVAVADNQAVKRGQLLFVVDRARYAIALEQARAALAERQATLS 102

Query: 112 TEKSALDFLNNKYDVLEKA-FESREEQLLDFLGKYHSTCSKVFNYGIS 158
             +  +    +  D++     E R   +        +  S V    ++
Sbjct: 103 QLRREIARDRSLQDLVAAEDAEVRRSNVQKAQAAVATAQSAVDLAQLN 150


>gi|297699961|ref|XP_002827035.1| PREDICTED: centrobin-like isoform 1 [Pongo abelii]
          Length = 925

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 69/204 (33%), Gaps = 8/204 (3%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D      +   +  ++ LR  ++ E+       ++     +A +   +  L+   +    
Sbjct: 335 DTARAGQLSEHQ-ELETLRAALEEERQTWAQQEHQLKEHYQALQEESQAQLEREKEKSQR 393

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++            L +  + +R +         +   L+  +S  Q      +   E 
Sbjct: 394 EAQATWEA----QHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARYESQRIQLES 449

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS---RD 265
               Q +    ER+       LR+    +++  + + +L  +   E A+ L +      +
Sbjct: 450 ELAVQLEQRVTERLAQAQESSLRQAASLREHHRKQLQDLSGQHQQELASQLAQFKVEMAE 509

Query: 266 LEQNQRTFADEMSKLTILEKTREQ 289
            E+ Q+  A++       E+ R +
Sbjct: 510 REERQQQVAEDYELRLAREQARVR 533



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/202 (10%), Positives = 62/202 (30%), Gaps = 2/202 (0%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
                 +     ++   +     ++   + L  +   L  + E+ +++      +  +  
Sbjct: 279 TRLEQSLSEAMEALNREQESARLQQRERETLEEERQALTLSLEAEQQRCCALQEERDTAR 338

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           +   +           ++  R           E+  +L     +  +++    +   +  
Sbjct: 339 AGQLSEHQELETLRAALEEERQTWAQQEHQLKEHYQALQEESQAQLEREKEKSQREAQAT 398

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ- 268
             +Q+ L   +  V +   EL     E+  +   ++ +      +      E++  LEQ 
Sbjct: 399 WEAQHQLALVQSEVRRLEGELDTARRERDALQLEMSLVQARYESQRIQLESELAVQLEQR 458

Query: 269 -NQRTFADEMSKLTILEKTREQ 289
             +R    + S L      RE 
Sbjct: 459 VTERLAQAQESSLRQAASLREH 480


>gi|296106625|ref|YP_003618325.1| Chemiosmotic efflux system C protein B [Legionella pneumophila
           2300/99 Alcoy]
 gi|295648526|gb|ADG24373.1| Chemiosmotic efflux system C protein B [Legionella pneumophila
           2300/99 Alcoy]
          Length = 314

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 16/118 (13%)

Query: 292 ILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
           + +PIAG I   ++ +     + +  L  I  +     + A+V  + +  VK G   T+ 
Sbjct: 119 VTAPIAGII-DARNINLGQAVEPNTVLFHIS-NRDKLLVVAQVYEEDLGKVKVGQEVTIH 176

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
              Y     K F   +  I+P +      +       V + + +         L+ G 
Sbjct: 177 ALSYPK---KVFAGQVTLIEPNLDSLTRTVN------VRITLDNEEKL-----LKPGM 220


>gi|218706855|ref|YP_002414374.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli UMN026]
 gi|293406844|ref|ZP_06650770.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli
           FVEC1412]
 gi|298382585|ref|ZP_06992182.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli
           FVEC1302]
 gi|300898008|ref|ZP_07116381.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           198-1]
 gi|226706822|sp|B7NDL9|AAEA_ECOLU RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|218433952|emb|CAR14869.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           UMN026]
 gi|291426850|gb|EFE99882.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli
           FVEC1412]
 gi|298277725|gb|EFI19241.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli
           FVEC1302]
 gi|300358279|gb|EFJ74149.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           198-1]
          Length = 310

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 22/188 (11%)

Query: 204 NLFEKNAVS--------QNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLE 254
            L +K  V         Q  L + +  V    +  +E   E     R  +  +  E   +
Sbjct: 67  QLVKKGQVLFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQ 126

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N L+ +   L + Q T         + +   E+  I +P  G +     ++   +  +
Sbjct: 127 ANNVLQTVLHQLAKAQATR-------DLAKLDLERTVIRAPADGWVTNLNVYT-GEFITR 178

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               + +V  +   Y+ A +   +++ V+ GY A +          K  K  ++ +   +
Sbjct: 179 GSTAVALVKQNS-FYVLAYMEETKLEGVRPGYRAEIT----PLGSNKVLKGTVDSVAAGV 233

Query: 375 SQQDNNLQ 382
           +   +   
Sbjct: 234 TNASSTSD 241



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    +   + L+ +  I     W            + +     +VV I    SG+
Sbjct: 2   KTLIRKFSRTAITVVLVILAFIAIFNAWVYYTE----SPWTRDARFSADVVAIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V +   + +G  L T +       ++  +  +   +  +  EK       N+  V
Sbjct: 58  ITQVNVHDNQLVKKGQVLFTIDQPRYQKALEEAQADVAYYQV-LAQEKRQEAGRRNRLGV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVLHQLAKAQATRDLAKL 150


>gi|153008782|ref|YP_001369997.1| RND family efflux transporter MFP subunit [Ochrobactrum anthropi
           ATCC 49188]
 gi|151560670|gb|ABS14168.1| efflux transporter, RND family, MFP subunit [Ochrobactrum anthropi
           ATCC 49188]
          Length = 369

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 77/241 (31%), Gaps = 16/241 (6%)

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE---- 207
           +      S+       +  + S Y  +L L    +    +  S + +  +++ L E    
Sbjct: 26  MLQAQADSLDIVPVAAVKAVASDYQPKLTLSGAIAARSLVNVSFRLNGQVVQRLVEIGQH 85

Query: 208 -KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEI 262
            +       ++  E+       +  ++  + + +    N    +A L       +   + 
Sbjct: 86  VEKGQPLASIDNVEQQANLRVAQASKDAAQAQLVQAQANFARQKALLAQGFTTRSTYDQA 145

Query: 263 SRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIV 322
           +++L+  Q   A   S+L           + +P++G I       +    Q +Q    I 
Sbjct: 146 NQNLQTTQSALASAESQLNDARDQLSYTELQAPVSGVITARNV-EAGQVVQAAQTAFSIA 204

Query: 323 PHS-KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
               +       V    + H K G   T+             +  + +I P++  Q   +
Sbjct: 205 EDGPRDAVFD--VQETLVNHAKIGMDVTI---ALLSDASISAEGKVREISPVVDAQTGTV 259

Query: 382 Q 382
           +
Sbjct: 260 R 260



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 17/133 (12%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVS-----------------IKNLR 107
           G + +  VE G  + +G PL + +++E    + + + S                  K L 
Sbjct: 73  GQVVQRLVEIGQHVEKGQPLASIDNVEQQANLRVAQASKDAAQAQLVQAQANFARQKALL 132

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMK 167
               T +S  D  N      + A  S E QL D   +   T  +    G+ +       +
Sbjct: 133 AQGFTTRSTYDQANQNLQTTQSALASAESQLNDARDQLSYTELQAPVSGVITARNVEAGQ 192

Query: 168 LTRMRSIYLNRLD 180
           + +      +  +
Sbjct: 193 VVQAAQTAFSIAE 205


>gi|327354171|gb|EGE83028.1| Spr18 protein [Ajellomyces dermatitidis ATCC 18188]
          Length = 1301

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 71/198 (35%), Gaps = 9/198 (4%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           + +   +   K L+     E+  L  L ++ ++  +  E R  Q      K         
Sbjct: 359 ENLKTLRAEQKKLQAANAGEREQLANLESRQEMQREDVE-RLLQRARIQKKIALLERSRP 417

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
                   +S +    + R++     DLEN+ +     ++  ++ L  ++ +  +    +
Sbjct: 418 VPRYQEAVQSFREAQHKRRNLQQEHGDLENQLAPALKSVNDKKEYLNSLQAVVAQK---R 474

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + + +QE +V  S L+L +     +++   I     EA  +     +EI +  +Q     
Sbjct: 475 DMVTRQEGVVADSALKLEKTQESIQDLDAQI-----EAEKKATKTHREIFKKSQQIINKL 529

Query: 274 ADEMSKLTILEKTREQKT 291
             +M +  +         
Sbjct: 530 TRQMEEEPVEYDAAAYTE 547


>gi|261378923|ref|ZP_05983496.1| multidrug efflux periplasmic linker protein BpeA [Neisseria cinerea
           ATCC 14685]
 gi|269144621|gb|EEZ71039.1| multidrug efflux periplasmic linker protein BpeA [Neisseria cinerea
           ATCC 14685]
          Length = 412

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 56/170 (32%), Gaps = 2/170 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GII+K   + GS +  G PL   +       ++  +  + + +  +   K+  D
Sbjct: 75  VRAQVGGIIQKRLFQEGSYVHAGQPLYQVDSSTYEANLESSRAQLASAQATLA--KANAD 132

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  V   A   +E        +      K     I S   SL              
Sbjct: 133 LARYKPLVAADAISKQEYDAAVTAKRSAEAGVKAAQAAIKSAGISLNRSRITAPISGFIG 192

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               ++ +LL A  ++    +     ++     S  ++ +  R + +  L
Sbjct: 193 QSKVSEGTLLNAGDATVLATIRQTNPMYVNVTQSAFEVMKLRRQIAEGKL 242


>gi|190149899|ref|YP_001968424.1| RND efflux membrane fusion protein [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307263225|ref|ZP_07544845.1| hypothetical protein appser13_6460 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|189915030|gb|ACE61282.1| putative RND efflux membrane fusion protein [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|306871442|gb|EFN03166.1| hypothetical protein appser13_6460 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 401

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 50/124 (40%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + K  V +G ++ +G  L+ F+       +   +  + N++ + +  ++ +   +  
Sbjct: 88  SGTVTKVHVRSGQRVNKGDLLVEFDSAVEEATLRASQAQLPNVKANYERYRNLIASNSAS 147

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               + A  +  + L +      S   +      + +   + + + +  +     + +E+
Sbjct: 148 KAEFDNAQSAYNQLLANIESLKASIARRKVYAPFNGLAGIVNVNVGQYITTGTQIVRVED 207

Query: 184 KSSL 187
           +SS+
Sbjct: 208 QSSM 211



 Score = 45.8 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 60/199 (30%), Gaps = 22/199 (11%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++ DL   E         LR +  +  N+  +     +      A+       + +  Q
Sbjct: 102 VNKGDLL-VEFDSAVEEATLRASQAQLPNVKANYERYRNLIASNSAS-----KAEFDNAQ 155

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
             +   ++ +  L+ +  ++ + +P  G            Y      +++ V       +
Sbjct: 156 SAYNQLLANIESLKASIARRKVYAPFNGLAGIVNVN-VGQYITTGTQIVR-VEDQSSMKV 213

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           R  +    ++ +  G   T               A I  IDP +      +         
Sbjct: 214 RFTLPQTDVEKIVVGQKVTAVVDALPGQTFP---ASIVAIDPAVDHTTGLINV------- 263

Query: 391 LKITDLAFSDNNIELRNGF 409
               +   ++N  +L +G 
Sbjct: 264 ----EAVITENQNKLLSGM 278


>gi|209885441|ref|YP_002289298.1| OqxA [Oligotropha carboxidovorans OM5]
 gi|209873637|gb|ACI93433.1| OqxA [Oligotropha carboxidovorans OM5]
          Length = 443

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/133 (11%), Positives = 49/133 (36%), Gaps = 4/133 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG       V  +++  +G +   + ++G+ +  G  L   +  +   + +  +  +++ 
Sbjct: 111 SGRFDAVQQVQ-VRARVTGFVTSVEFKDGAIVKAGDLLYVIDPRQYQAVAEQAEGQLQDA 169

Query: 107 RCHIDTEKSALDFLNN---KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  +   K  L+  ++      V +   + R +QL             +    +   +  
Sbjct: 170 KARVVLAKRELERASSLIRTDAVSQSVVDQRTQQLQTAEAAVLQAEGALKRAQLDVEFSQ 229

Query: 164 LKMKLTRMRSIYL 176
           ++  ++   S +L
Sbjct: 230 VRAPISGRISRHL 242


>gi|332702362|ref|ZP_08422450.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332552511|gb|EGJ49555.1| efflux transporter, RND family, MFP subunit [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 415

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 65/175 (37%), Gaps = 6/175 (3%)

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
               VEI++  +G ++    E G ++ +G  L   +       +D+ +  + +    +  
Sbjct: 82  ASQTVEIRARVNGFLESKHFEEGGRVTEGQTLFRIDPRSFQAEMDVAQARLTSAEAQLMR 141

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMR 172
            +  +     +Y  L ++  + E++L ++  +     S +           L +  T + 
Sbjct: 142 ARQKVK----RYTELLRSDAATEDELEEWQTEERVAVSNIELEKARITQAKLDLSYTTIT 197

Query: 173 SIYLNRLDLENK--SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYK 225
           S    R+ +  +   S +          +     ++ +  +S+ DL Q  R+V  
Sbjct: 198 SPIDGRIGMAKRDVGSYVDGSSDGLLAVVEKTDPIYVRYNISEQDLLQTRRLVES 252



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 88/297 (29%), Gaps = 33/297 (11%)

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +      +V           + +   + R++ L  + L    +     + +        K
Sbjct: 40  QKADHAPQVVQTQAPQKAMPVHVVTLQSRTVPLQPVFLGQTEASQTVEIRARVNGFLESK 99

Query: 204 NLFEKNAVSQNDLN------QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA- 256
           +  E   V++            +  +  +   L     +     + +    +    + A 
Sbjct: 100 HFEEGGRVTEGQTLFRIDPRSFQAEMDVAQARLTSAEAQLMRARQKVKRYTELLRSDAAT 159

Query: 257 -NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA-QQ 314
            + L+E   +          E +++T  +      TI SPI G I         +Y    
Sbjct: 160 EDELEEWQTEERVAVSNIELEKARITQAKLDLSYTTITSPIDGRI-GMAKRDVGSYVDGS 218

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQH----VKKGYTAT-------VRFPHYADIREKKF 363
           S  L+ +V  +   Y+R  ++ + +      V+ G T         +R          + 
Sbjct: 219 SDGLLAVVEKTDPIYVRYNISEQDLLQTRRLVESGKTTEPSMNNMRLRITLADGTPYAQ- 277

Query: 364 KAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           +  I   DP I     +L           +    F + +  L+ G    V  T  + 
Sbjct: 278 EGEITYTDPQIDPATGSL-----------VVRGTFPNPDGRLQPGQFVHVRVTGIDR 323


>gi|332231117|ref|XP_003264744.1| PREDICTED: myosin-9 isoform 1 [Nomascus leucogenys]
          Length = 1929

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 5/199 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ E+  L+  N K    +K  E R  +    L +     SK
Sbjct: 965  ARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTE-EEEKSK 1023

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +     +     R+R     R +LE     L    +     +     L  + A 
Sbjct: 1024 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIA---ELQAQIAE 1080

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +  L ++E  +  +   + E   ++   L+ I EL  +   E    L+       + ++
Sbjct: 1081 LKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELESQI-SELQEDLESERASRNKAEK 1139

Query: 272  TFADEMSKLTILEKTREQK 290
               D   +L  L+   E  
Sbjct: 1140 QKRDLGEELEALKTELEDT 1158



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 68/209 (32%), Gaps = 5/209 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +D   +   +      K     + + ++ +  L  +    E+A    +++  +   + 
Sbjct: 1660 ELDDTRASR--EEILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEI 1717

Query: 146  HSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             ++  K  +       +   +      +     N   + ++       +     DL + +
Sbjct: 1718 ANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLER 1777

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEI 262
            +  +KN  ++  L +Q + +     E+   +  + K  +  +     +   +  N  KE 
Sbjct: 1778 SHAQKNENARQQLERQNKELKVKLQEMEGTVKSKYKASITALEAKIAQLEEQLDNETKER 1837

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +Q +RT       L  ++  R    
Sbjct: 1838 QAACKQVRRTEKKLKDVLLQVDDERRNAE 1866



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 70/225 (31%), Gaps = 37/225 (16%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH-------------- 146
               + LR  +  +K  L+ + +  +   +  E R + L     K                
Sbjct: 904  AEAEELRARLTAKKQELEEICHDLEARVEEEEERCQHLQTEKKKMQQNIQELEEQLEEEE 963

Query: 147  --------------------STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                     +       + +  K+   R+     N  + E KS 
Sbjct: 964  SARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSK 1023

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L  L + H+  +T ++    +    + +L +  R +   + +L + I E +  +  +  
Sbjct: 1024 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKM 1083

Query: 247  LYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTRE 288
               +   E    L  +  +  Q     +   +  S+++ L++  E
Sbjct: 1084 QLAKKEEELQAALARVEEEAAQKNMALKKIRELESQISELQEDLE 1128



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 66/197 (33%), Gaps = 8/197 (4%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            S+  L       +  ++ +  + + LE   ++ E+  L       +  ++          
Sbjct: 1526 SVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDE 1585

Query: 162  RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-------EKNAVSQN 214
            +S + K   +R +     +LE++       +++ +K    +K+L        +    +  
Sbjct: 1586 QSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEAIK 1645

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             L + +  +     EL +    ++ +L    E   +     A  + ++  +L   +R   
Sbjct: 1646 QLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMI-QLQEELAAAERAKR 1704

Query: 275  DEMSKLTILEKTREQKT 291
                +   L       +
Sbjct: 1705 QAQQERDELADEIANSS 1721



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 75/235 (31%), Gaps = 29/235 (12%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D ++ +        ++ +   ++ E+            LE   +  E  +          
Sbjct: 1584 DEQSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEA 1643

Query: 149  CSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--- 203
              ++      +    R L         I     + E K   + A +   Q++L   +   
Sbjct: 1644 IKQLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMIQLQEELAAAERAK 1703

Query: 204  --------NLFE-------KNAVSQNDLNQQERIVYKSTLELRENIH-------EQKNML 241
                     L +       K A++  +  + E  + +   EL E            K   
Sbjct: 1704 RQAQQERDELADEIANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKAN 1763

Query: 242  RHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              I+++  + NLE ++  K     + LE+  +    ++ ++    K++ + +I +
Sbjct: 1764 LQIDQINTDLNLERSHAQKNENARQQLERQNKELKVKLQEMEGTVKSKYKASITA 1818



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 10/167 (5%)

Query: 135  EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            E+   +   K       +       + +  K+   R+     N  + E KS  L  L + 
Sbjct: 972  EKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNK 1031

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQER-------IVYKSTLELRENIHEQKNMLRHINEL 247
            H+  +T ++    +    + +L +  R        +     EL+  I E K  L    E 
Sbjct: 1032 HEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEE 1091

Query: 248  YDEANLEFANYLKE---ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               A         +     + + + +   ++    L     +R +  
Sbjct: 1092 LQAALARVEEEAAQKNMALKKIRELESQISELQEDLESERASRNKAE 1138



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 73/210 (34%), Gaps = 12/210 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +  D  +   +       +   AL+    +   LE+  +    ++ D +         V
Sbjct: 1468 AEERDRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSV 1527

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                    ++ + ++   T++  +       E+    L   L + +      ++L  ++ 
Sbjct: 1528 HELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFE--RDLQGRDE 1585

Query: 211  VSQNDLNQQERIVYKSTLEL-----RENIHEQKNMLRHINELYDEANLEFANY-LKEISR 264
             S+    Q  R V +   EL     + ++         ++    EA+++ AN    E  +
Sbjct: 1586 QSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEAIK 1645

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILS 294
             L + Q    D M +L   +    ++ IL+
Sbjct: 1646 QLRKLQAQMKDCMRELD--DTRASREEILA 1673


>gi|317151122|ref|XP_001824460.2| endocytosis protein end4 [Aspergillus oryzae RIB40]
          Length = 1014

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 73/224 (32%), Gaps = 5/224 (2%)

Query: 74  NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
              ++ Q   L      +T   +   +    N R   + ++  L   + +   LE+    
Sbjct: 350 EQQRLAQEQLLRDQYQTQTQGRLAELEQENLNARAQYERDQLMLQQYDRRVKDLEEQMNQ 409

Query: 134 REEQLLDFLGKYHSTCSKVFNYGI---SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
               L +          +     +    S Y +L    +++R  +L+ L       L  A
Sbjct: 410 LTSNL-NMQSASKDEQIRSLQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTTKSLKLKAA 468

Query: 191 LL-SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD 249
               + ++   + + L  KN    + + +++R ++        N  E + + R +    +
Sbjct: 469 SAQEAIERREKLERELKTKNLELADMIRERDRALHDRDRLTGNNKEELEKVKRELRLAIE 528

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            A         EIS  L +  R  AD    L    +  E  +  
Sbjct: 529 RAENAERQKGTEISTLLSKYNREMADLEEALRNKNRALEDISSR 572



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 78/210 (37%), Gaps = 7/210 (3%)

Query: 87  FEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH 146
           FE+ +       +    + LR    T+         + ++  +A   R++ +L    +  
Sbjct: 341 FEEQQRLQAEQQRLAQEQLLRDQYQTQTQGRLAELEQENLNARAQYERDQLMLQQYDRRV 400

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD----LTMM 202
               +  N   S++      K  ++RS+        +K   L  L S  +++    L   
Sbjct: 401 KDLEEQMNQLTSNLNMQSASKDEQIRSLQEQVNTWRSKYEALAKLYSQLRQEHLDLLQTT 460

Query: 203 KNLFEKNAVSQNDLNQ---QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
           K+L  K A +Q  + +    ER +    LEL + I E+   L   + L      E     
Sbjct: 461 KSLKLKAASAQEAIERREKLERELKTKNLELADMIRERDRALHDRDRLTGNNKEELEKVK 520

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +E+   +E+ +     + ++++ L     +
Sbjct: 521 RELRLAIERAENAERQKGTEISTLLSKYNR 550


>gi|312968428|ref|ZP_07782637.1| uncharacterized protein ydhJ [Escherichia coli 2362-75]
 gi|312286646|gb|EFR14557.1| uncharacterized protein ydhJ [Escherichia coli 2362-75]
          Length = 310

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 65/188 (34%), Gaps = 22/188 (11%)

Query: 204 NLFEKNAVS--------QNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLE 254
            L +K  V         Q  L + +  V    +  +E   E     R  +  +  E   +
Sbjct: 67  QLVKKGQVLFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQ 126

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N L+ +   L + Q T         + +   E+  I +P  G +     ++   +  +
Sbjct: 127 ANNVLQTVLHQLAKAQATR-------DLAKLDLERTVIRAPADGWVTNLNVYT-GEFITR 178

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               + +V  +   Y+ A +   +++ V+ GY A +          K  K  ++ +   +
Sbjct: 179 GSTAVALVKQNS-FYVLAYMEETKLEGVRPGYRAEIT----PLGSNKVLKGTVDSVAAGV 233

Query: 375 SQQDNNLQ 382
           +   + L 
Sbjct: 234 TNASSTLD 241



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    +   + L+ +  I     W            + +     +VV I    SG+
Sbjct: 2   KTLIRKFSRTAITVVLVILAFIAIFNAWVYYTE----SPWTRDARFSADVVAIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V +   + +G  L T +       ++  +  +   +  +  EK       N+  V
Sbjct: 58  ITQVNVHDNQLVKKGQVLFTIDQPRYQKALEEAQADVAYYQV-LAQEKRQEAGRRNRLGV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVLHQLAKAQATRDLAKL 150


>gi|197120968|ref|YP_002132919.1| efflux transporter RND family, MFP subunit [Anaeromyxobacter sp. K]
 gi|196170817|gb|ACG71790.1| efflux transporter, RND family, MFP subunit [Anaeromyxobacter sp.
           K]
          Length = 411

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 65/189 (34%), Gaps = 7/189 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G + +   V E+++  +GI+ K     GS + QG PL   +       +D  +  +   
Sbjct: 69  PGRV-SASKVAEVRARVNGIVLKRLFTEGSDVKQGQPLFKIDPAPYQAALDSARAQL--- 124

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKM 166
               +   ++    + +Y  L  A     ++  D +       + V     +     + +
Sbjct: 125 -ARAEATLASARLTSERYTELVAANAVSRQEHEDAVAALKKAEADVAAGRAAVDAARINL 183

Query: 167 KLTRMRSIYLNRLDLENKSSL--LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVY 224
             T + S    R+     +    ++A  ++    +  +  ++     S  +L +  R + 
Sbjct: 184 GYTTVTSPVSGRIGRSEVTEGAYVQAAQATLLATVQQLDPVYVDVTQSSAELLRMRRDLE 243

Query: 225 KSTLELREN 233
              L+    
Sbjct: 244 AGKLQSAGA 252


>gi|167839747|ref|ZP_02466431.1| efflux transporter, RND family, MFP subunit [Burkholderia
           thailandensis MSMB43]
          Length = 357

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 58/192 (30%), Gaps = 16/192 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           ++ +++ +   E                +   + +   A    E     +Q++  F    
Sbjct: 82  RKGQLIVQLFDEPERAKLASIQAKAAYAKRQLDRSQALAQTGAEPRNIFDQHRFDFDASA 141

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + +   +    QK + +P  G ++  +  +   Y      +  +       Y    V  K
Sbjct: 142 ADIRETQAVITQKAVRAPFDG-VLGLRRVNLGQYLSAGDAIATLT-DLDTLYANFTVPQK 199

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  ++ G   ++    Y D         +  I+P I     N+  Q             
Sbjct: 200 NLSQLRLGQNVSITTDAYPDR---ALIGRVSAIEPQIGADTRNVAVQ-----------AT 245

Query: 398 FSDNNIELRNGF 409
            ++ +  LR G 
Sbjct: 246 LANPDHLLRPGM 257



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 46/149 (30%), Gaps = 2/149 (1%)

Query: 56  VVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
                +P  +G I     E G+ + +G  ++   D      +   +      +  +D  +
Sbjct: 58  RQVTLAPEVAGRIVALHFEAGATVRKGQLIVQLFDEPERAKLASIQAKAAYAKRQLDRSQ 117

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +         ++ ++     +    D          K        V    ++ L +  S 
Sbjct: 118 ALAQTGAEPRNIFDQHRFDFDASAADIRETQAVITQKAVRAPFDGVLGLRRVNLGQYLSA 177

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                 L +    L A  +  QK+L+ ++
Sbjct: 178 GDAIATLTD-LDTLYANFTVPQKNLSQLR 205


>gi|167567836|ref|ZP_02360752.1| efflux transporter, RND family, MFP subunit [Burkholderia
           oklahomensis EO147]
          Length = 307

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 59/192 (30%), Gaps = 16/192 (8%)

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           ++ +++ +   E                +   + +   A    E     +Q++  F    
Sbjct: 79  RRGQLIVQLFDEPERAKLASIQAKAAFAKRQLDRSQALAQTGAEPRNIFDQHRFDFDAAA 138

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPK 337
           + +   +    QK + +P  G ++  +  +   Y      +  +       Y    V  K
Sbjct: 139 ADIRETQAVITQKAVRAPFDG-VLGLRRVNLGQYLNAGDAIATLT-DLDTLYANFTVPQK 196

Query: 338 QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLA 397
            +  ++ G   ++    Y D         +  I+P +  +  N+  Q             
Sbjct: 197 NLSQLRLGQNVSIATDAYPDR---ALVGRVTAIEPQVGSETRNVAVQ-----------AT 242

Query: 398 FSDNNIELRNGF 409
            ++ +  LR G 
Sbjct: 243 LANPDHLLRPGM 254


>gi|154341427|ref|XP_001566665.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063990|emb|CAM40181.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 1363

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 72/214 (33%), Gaps = 6/214 (2%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNL---RCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
             LL  ++   T  ++ +    + L   +  +  ++   D L      L+ A ++  E+L
Sbjct: 418 QRLLEEKNTAATKAMEARLERDRQLVKLKDALLLKRQEQDDLQRHIRALQHAVDASNEEL 477

Query: 139 LDFLGKY--HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
               G+   H   S      +S++  SL  +  R  ++       E      +A      
Sbjct: 478 RQVQGRLDVHQVESTSTAERVSAMQESLSEERHRNAALIAKSSATEEAVHKAQAQHRLAD 537

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
             LT  + L E+  +    + ++ER    +  ++       +   R      D   L   
Sbjct: 538 GQLTAARGLAERERLRYLQMMEEERSHRATDADILRKDIVDELDARERQYQVDRCRLAEE 597

Query: 257 NYLKEISRDLEQNQRTFA-DEMSKLTILEKTREQ 289
            +++ +     + +R    D +     L    ++
Sbjct: 598 QFMRGLRDGKAEGRRAAETDLLGHQDELRLNLQR 631


>gi|118370119|ref|XP_001018262.1| conserved hypothetical protein [Tetrahymena thermophila]
 gi|89300029|gb|EAR98017.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
          Length = 1216

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 84/236 (35%), Gaps = 21/236 (8%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
            +I +    +  E  +     D  +   +      + ++  L+    + ++L+K  E  E
Sbjct: 236 DEIQRKQEQMRLEQEQRLKQQDELQRKRQEQEKKFNEQRELLEKQRQEQELLKKQREEAE 295

Query: 136 EQLLDFLGKYHSTCSKVFNY-----------------GISSVYRSLKMKLTRMRSIYLNR 178
            +  +   +       +                     +      L+  L R   + + +
Sbjct: 296 RRRREQELQRKKMLDDLQRQKEEQEIKKKAEEEEAALRLQKQKEELEQILKRREEMRIEQ 355

Query: 179 LDLENKSSLLRALLSSHQK-DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
            + +        L    ++ +   ++ + E+  + +  LN Q+    K  LE ++   E 
Sbjct: 356 ENSDRIRQQQEYLKKLQEEAEQIRLQQMEEQQKLEKERLNNQQNNEQKEELETQQQHEEL 415

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA---DEMSKLTILEKTREQK 290
           +   R I E   E  ++     +E+ R  ++++       +E+ +L + E+ R++K
Sbjct: 416 EKQKREIEEKQREIEIQKKLEEEELQRKRQEHELRVQKQKEEIERLQLEEQERQKK 471



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 73/206 (35%), Gaps = 18/206 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
             T    +L+   I+  +  I+T+   ++    +   +E   +   +QLL    +  ++ 
Sbjct: 86  TLTEQQRELQLKKIEQEKLSIETKMQQIEQELREQQNIEILNQQELQQLLQEEEQTLNSQ 145

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
           ++            ++ +     +       L+ +  LLR      ++ +   +   E+ 
Sbjct: 146 TEDVEDIQKQQDDYIQQQKKIFEAEQERLKRLKEQEELLRIQREQEEQRIREQQQEIERQ 205

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI------- 262
            + QN L +QERI  +   + R    E +     I    ++  LE    LK+        
Sbjct: 206 -IEQNRL-EQERIKREKEEQNRRKREEIQRKKDEIQRKQEQMRLEQEQRLKQQDELQRKR 263

Query: 263 ---------SRDLEQNQRTFADEMSK 279
                     R+L + QR   + + K
Sbjct: 264 QEQEKKFNEQRELLEKQRQEQELLKK 289



 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 70/206 (33%), Gaps = 4/206 (1%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +  D+   +   I+  +   + E+  L  L  + ++L    E  E+++ +   +      
Sbjct: 148 DVEDIQKQQDDYIQQQKKIFEAEQERLKRLKEQEELLRIQREQEEQRIREQQQEIERQIE 207

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR---ALLSSHQKDLTMMKNLFE 207
           +             +    +   I   + +++ K   +R         Q +L   +   E
Sbjct: 208 QNRLEQERIKREKEEQNRRKREEIQRKKDEIQRKQEQMRLEQEQRLKQQDELQRKRQEQE 267

Query: 208 KNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           K    Q +L +++R   +   +   E    ++       ++ D+   +      +   + 
Sbjct: 268 KKFNEQRELLEKQRQEQELLKKQREEAERRRREQELQRKKMLDDLQRQKEEQEIKKKAEE 327

Query: 267 EQNQRTFADEMSKLTILEKTREQKTI 292
           E+       +  +L  + K RE+  I
Sbjct: 328 EEAALRLQKQKEELEQILKRREEMRI 353



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/187 (9%), Positives = 61/187 (32%), Gaps = 6/187 (3%)

Query: 109 HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKL 168
             +++         + ++  K  E  +  +   + +      +  N  I +     ++  
Sbjct: 77  RPNSQNQQKTLTEQQRELQLKKIEQEKLSIETKMQQIEQELREQQNIEILNQQELQQLLQ 136

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI-----V 223
              +++     D+E+        +   +K     +   ++    Q +L + +R      +
Sbjct: 137 EEEQTLNSQTEDVEDIQKQQDDYIQQQKKIFEAEQERLKR-LKEQEELLRIQREQEEQRI 195

Query: 224 YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTIL 283
            +   E+   I + +     I    +E N      ++    ++++ Q     E  +    
Sbjct: 196 REQQQEIERQIEQNRLEQERIKREKEEQNRRKREEIQRKKDEIQRKQEQMRLEQEQRLKQ 255

Query: 284 EKTREQK 290
           +   ++K
Sbjct: 256 QDELQRK 262



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 68/206 (33%), Gaps = 6/206 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +   + + ++  +K L+   +  +   +    +    ++  E + EQ      +      
Sbjct: 162 QQKKIFEAEQERLKRLKEQEELLRIQREQEEQRIREQQQEIERQIEQNRLEQERIKREKE 221

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +        + R       +   + L +     +   L+      +K     + L EK  
Sbjct: 222 EQNRRKREEIQRKKDEIQRKQEQMRLEQEQRLKQQDELQRKRQEQEKKFNEQRELLEKQR 281

Query: 211 VSQNDLNQ-----QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             + +L +      ER   +  L+ ++ + + +               E A  L++   +
Sbjct: 282 -QEQELLKKQREEAERRRREQELQRKKMLDDLQRQKEEQEIKKKAEEEEAALRLQKQKEE 340

Query: 266 LEQNQRTFADEMSKLTILEKTREQKT 291
           LEQ  +   +   +    ++ R+Q+ 
Sbjct: 341 LEQILKRREEMRIEQENSDRIRQQQE 366


>gi|313896169|ref|ZP_07829722.1| efflux transporter, RND family, MFP subunit [Selenomonas sp. oral
           taxon 137 str. F0430]
 gi|320529286|ref|ZP_08030376.1| efflux transporter, RND family, MFP subunit [Selenomonas artemidis
           F0399]
 gi|312974968|gb|EFR40430.1| efflux transporter, RND family, MFP subunit [Selenomonas sp. oral
           taxon 137 str. F0430]
 gi|320138460|gb|EFW30352.1| efflux transporter, RND family, MFP subunit [Selenomonas artemidis
           F0399]
          Length = 395

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 44/112 (39%), Gaps = 4/112 (3%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G+I+  D V  I+S  SG I +  V+ G  +  G PL   +D +    +   + ++    
Sbjct: 55  GQIVGTDEV-NIQSRVSGNIVEKYVQGGQLVTAGQPLYRIDDRQYRSAVLQAQATLAQSE 113

Query: 108 CHIDTEKSAL---DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
             ++  +  L   + L     + E+   ++  Q+  +     +  + +    
Sbjct: 114 ATLNNARMDLSRYEQLYADAAISEQTLTTQRAQVSAYEAAAAANAALLRQAQ 165


>gi|312885494|ref|ZP_07745133.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
 gi|311302074|gb|EFQ79104.1| efflux transporter, RND family, MFP subunit [Mucilaginibacter
           paludis DSM 18603]
          Length = 366

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 18/179 (10%)

Query: 237 QKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPI 296
           Q      +     +      +          Q +        ++  L +  +   I+SPI
Sbjct: 126 QAQAQAELASTVYQRQKNLWDQKIGTEVQFLQAKTNMEATQKQVASLRQQADLARIISPI 185

Query: 297 AGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
            GT+           A      ++IV ++ +  ++A V       V +G T  V FP   
Sbjct: 186 NGTVDQMDL-KLGQVASPGTTGIRIV-NADILKVKADVPESYATRVSQGQTVKVLFPDAK 243

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           D       A +     +I     +      + + +K+        N  LR    A +  
Sbjct: 244 DS----LIAKVTFASKVIDPGSRS------FGIEIKL------PTNRNLRPNMTATLKI 286



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 44/147 (29%), Gaps = 5/147 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V+ G  + +G  L+  ++      I   +   +        +K+  D      
Sbjct: 93  GTIIAINVKVGDHVHKGEVLVQLDNSVLKQNILQAQAQAELASTVYQRQKNLWDQKIGTE 152

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS-----IYLNRL 179
               +A  + E                     I+     + +KL ++ S     I +   
Sbjct: 153 VQFLQAKTNMEATQKQVASLRQQADLARIISPINGTVDQMDLKLGQVASPGTTGIRIVNA 212

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLF 206
           D+    + +    ++       +K LF
Sbjct: 213 DILKVKADVPESYATRVSQGQTVKVLF 239


>gi|281344048|gb|EFB19632.1| hypothetical protein PANDA_008367 [Ailuropoda melanoleuca]
          Length = 2063

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 70/188 (37%), Gaps = 7/188 (3%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ++    DL D  K +++NL    + E      + ++   +  A +S+   L   + + 
Sbjct: 769 VLDNQIKKDLAD--KETLENLMQRHEEEAHEKGKILSEQKAMINAMDSKIRSLEQRIVEL 826

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                   N  + +  R++K +   +  +   +  LE ++  L A     ++ L   + +
Sbjct: 827 SEANKLAANSSLFT-QRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQL---EKI 882

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
             ++   +N L + E  + + +LE  E   E K  L  +     E   +    L+     
Sbjct: 883 SHQDHSDKNRLLELETRLREVSLEHEEQKLELKRQLTELQLSLQERESQLT-ALQAARAA 941

Query: 266 LEQNQRTF 273
           LE   R  
Sbjct: 942 LESQLRQA 949



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 75/207 (36%), Gaps = 3/207 (1%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL---EKAFESREEQLLDFL 142
              +     D +  K+   +  R  +  EKS  +    +   +   EK   +R +Q +   
Sbjct: 1068 VMDLEALNDELLEKERQWEAWRSVLGDEKSQFECRVRELQRMLDTEKQSRARADQRITES 1127

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +      K     I ++ ++LK +  +  S+     DLE K ++L     S Q+ L   
Sbjct: 1128 RQVVELAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQKLETE 1187

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            + L ++    Q  L QQ  +       L + + E  +    +     +   +  N     
Sbjct: 1188 RELKQRLLEEQAKLQQQMDLQKSHIFRLTQGLQEALDRADLLKTERSDLEYQLENIQVLY 1247

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQ 289
            S +  + + T + +   +  L+   +Q
Sbjct: 1248 SHEKVKMEGTISQQTKLIDFLQAKMDQ 1274



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 28/247 (11%), Positives = 72/247 (29%), Gaps = 40/247 (16%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-----------LDFLNNKYDVLEKAFES 133
            L     E    +   + +   L   +   K+            +  L    D +++ F++
Sbjct: 921  LQLSLQERESQLTALQAARAALESQLRQAKTELEETTAEAEEEIQALTAHRDEIQRKFDA 980

Query: 134  REE------QLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                      L + L +     +++ N    +S            +  +      L  + 
Sbjct: 981  LRNSCTVITDLEEQLNQLTEDNAELNNQNFYLSKQLDEASGANDEIVQLRSEVDHLRREI 1040

Query: 186  SLLRALLSSHQKDLTMMKN---LFEKNAVSQN----DLNQQERIVYK------------- 225
            +     L+S ++ +  +K    + E+  +       +L ++ER                 
Sbjct: 1041 TEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDELLEKERQWEAWRSVLGDEKSQFE 1100

Query: 226  -STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                EL+  +  +K      ++   E+       +KE   ++   Q+   ++  K   L 
Sbjct: 1101 CRVRELQRMLDTEKQSRARADQRITESRQVVELAVKEHKAEILALQQALKEQKLKAESLS 1160

Query: 285  KTREQKT 291
                   
Sbjct: 1161 DKLNDLE 1167


>gi|116062149|dbj|BAF34705.1| fast skeletal myosin heavy chain mMYH-9 [Oryzias latipes]
          Length = 1936

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 84/211 (39%), Gaps = 12/211 (5%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSAL----DFLNNKYDVLEKAFESREEQLLDFLGKYH 146
            E+ + ++ K  S++  +  +  E   L    +  N+    L+K   + ++ L ++  KY 
Sbjct: 1404 ESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYE 1463

Query: 147  STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             + +++   G     RSL  +L +M++ Y   LD   +   ++    + Q++++ +    
Sbjct: 1464 ESQAEL--EGAQKEARSLSTELFKMKNSYEEALD---QLETMKRENKNLQQEISDLTEQI 1518

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
             +   S ++L + ++ V     E++  + E +  L H         LE      EI R L
Sbjct: 1519 GETGKSIHELEKAKKSVETEKSEIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKL 1578

Query: 267  EQNQRTFADEM---SKLTILEKTREQKTILS 294
             +             ++    ++     + S
Sbjct: 1579 AEKDEEMEQIKRNSQRVIESMQSTLDAEVRS 1609



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 75/234 (32%), Gaps = 23/234 (9%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  ID   S ++ +      LEK   + E+QL +   K 
Sbjct: 1208 QIDNLQRVKQKLEKEKS--EYKMEIDDLSSNMEAVAKSKSNLEKMCRTLEDQLSELKAKN 1265

Query: 146  HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                 +     ++ +        T          + E   S L     +  + +  +K  
Sbjct: 1266 DENIRQ-----LNDLNAQRARLQTENGEFARQLEEKEALVSQLTRGKQAFTQQIEELKRQ 1320

Query: 206  FEKNAVSQNDL--------------NQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
             E+   ++N L               +Q     ++  EL+  + +  + +      Y+  
Sbjct: 1321 VEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETD 1380

Query: 252  NLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
             ++    L+E  + L Q  +   + +  +     + E+      + G +     
Sbjct: 1381 AIQRTEELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQR--LQGEVEDLMI 1432



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 19/225 (8%)

Query: 74   NGSQILQGTPLLTF--EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
             G   L    ++    +  ++ + I  K   I  L   I+ E+S    L  K   L+   
Sbjct: 1058 EGDLKLAQESIMDLENDKQQSDEKIKKKDFEISQLLSKIEDEQSLGAQLQKKIKELQARI 1117

Query: 132  ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
            E  EE++            +     +S     +  +L         ++++  K       
Sbjct: 1118 EELEEEIEAERAARAKVEKQ--RADLSRELEEISERLEEAGGATSAQIEMNKKREA---- 1171

Query: 192  LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                 +   + ++L E     +       +    S  EL E I   + + + + +   E 
Sbjct: 1172 -----EFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSEY 1226

Query: 252  NLEFANYLKEISR------DLEQNQRTFADEMSKLTILEKTREQK 290
             +E  +    +        +LE+  RT  D++S+L        ++
Sbjct: 1227 KMEIDDLSSNMEAVAKSKSNLEKMCRTLEDQLSELKAKNDENIRQ 1271



 Score = 37.3 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 72/227 (31%), Gaps = 8/227 (3%)

Query: 72   VENGSQILQGTP--LLTFEDIETTDLIDLKKVSIKNLRCHID--TEKSALDFLNNKYDVL 127
            V     +       LL  ++    +     +  +  ++  +D   +++       K  + 
Sbjct: 1703 VAEQELVDASERVGLLHSQNTSLLNTKKKLESDLVQVQGEVDDAIQEARNAEEKAKKAIT 1762

Query: 128  EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-RMRSIYLNRLDLENKSS 186
            + A  S E +       +     K     +  +   L       M+        LE++  
Sbjct: 1763 DAAMMSEELKKEQDTSAHLERMKKNLEVTVKDLQHRLDEAENLAMKGGKKQLQKLESRVR 1822

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L + + S Q+          K      +L  Q     K+   L++ + + +  ++    
Sbjct: 1823 ELESEVESEQRRGADAIKGVRKYERRVKELTYQTEEDKKNVARLQDLVDKLQLKVKAYKR 1882

Query: 247  LYDEANLEFA---NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              +EA  +     + L+++  +LE+ Q       S++  L       
Sbjct: 1883 QAEEAEEQANTHMSKLRKVQHELEEAQERADIAESQVNKLRVKSRDT 1929


>gi|16552142|dbj|BAB71249.1| unnamed protein product [Homo sapiens]
          Length = 883

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 76/217 (35%), Gaps = 4/217 (1%)

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
           + +V+N   I +    +     E     + K      L+  ++  +  L     +   ++
Sbjct: 631 QLEVKNQQNIKEERERMRANLEELRSQHNEKVEENSTLQQRLEESEGELRKNLEELFQVK 690

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
              E  + ++ D   +      +  +    S  R     +  +     +  DL       
Sbjct: 691 MEREQHQTEIRDLQDQLSEMHDE-LDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQ 749

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
             LL   +++LT +K   ++   S   ++++ +         LRE++ E    +  +   
Sbjct: 750 EDLLRKRERELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASR 809

Query: 248 YDEANLEFA--NYLKEISRDLEQNQRTFADEMSKLTI 282
            + +  + A      ++ ++  +N +  ++E+ +   
Sbjct: 810 SNTSEQDQAGTEMRVKLLQEENENLQGRSEELERRVA 846



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/160 (13%), Positives = 65/160 (40%), Gaps = 3/160 (1%)

Query: 136 EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
           +Q L       +    ++NY       +      ++  ++     L+++++      +  
Sbjct: 543 QQELTQQTNEETAKQILYNYLKEGSTDNDDATKRKVNLVFEKIQTLKSRAAGSAQGNNQA 602

Query: 196 QKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
               + +K+L E+ +    ++ + +R + +  ++ ++NI E++  +R   E     + E 
Sbjct: 603 CNSTSEVKDLLEQKSKLTIEVAELQRQL-QLEVKNQQNIKEERERMRANLEELRSQHNEK 661

Query: 256 ANYLKEISRDLEQNQRTFADEMSKL--TILEKTREQKTIL 293
                 + + LE+++      + +L    +E+ + Q  I 
Sbjct: 662 VEENSTLQQRLEESEGELRKNLEELFQVKMEREQHQTEIR 701


>gi|325128745|gb|EGC51608.1| membrane fusion protein MtrC [Neisseria meningitidis N1568]
 gi|325145094|gb|EGC67377.1| membrane fusion protein MtrC [Neisseria meningitidis M01-240013]
 gi|325198809|gb|ADY94265.1| membrane fusion protein MtrC [Neisseria meningitidis G2136]
 gi|325205572|gb|ADZ01025.1| membrane fusion protein MtrC [Neisseria meningitidis M04-240196]
          Length = 412

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 2/170 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GII+K   + GS +  G PL   +       ++  +  +   +  +   K+  D
Sbjct: 75  VRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEANLESARAQLATAQATLA--KADAD 132

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  V  +A   +E        +      K     I S   +L              
Sbjct: 133 LARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQAAIKSAGINLNRSRITAPISGFIG 192

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               ++ +LL A  ++    +     ++     S +++ +  R + +  L
Sbjct: 193 QSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKL 242


>gi|315125705|ref|YP_004067708.1| secretion protein [Pseudoalteromonas sp. SM9913]
 gi|315014219|gb|ADT67557.1| secretion protein [Pseudoalteromonas sp. SM9913]
          Length = 398

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 77/222 (34%), Gaps = 17/222 (7%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQ--VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           G +      + + +  SG+I         G    +G  LL  +D +    +   + ++ N
Sbjct: 63  GTVKPRTQSMLV-AQVSGLIIDINEQFREGGFFEKGDVLLQLDDRDLKAEVKSAQANLLN 121

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
              ++  E++         D      ES    L+    +  +  ++V +         L 
Sbjct: 122 AEQNLLEEQAR--GRQALTDWQRLGNESEPSILVLRKPQLAAAQAQVLSAQAQLEKAQLN 179

Query: 166 MKLTRMRSIYLNR-----LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
           ++ T++++ Y  R     +DL    S    L + +  D   ++   +   +   +L +Q 
Sbjct: 180 LERTKIKAPYAGRVLNRSVDLGQVVSNNMQLATIYATDSVEIRLPIKNKDLPFINLPEQY 239

Query: 221 RIVYKSTLE-----LRENIHEQ--KNMLRHINELYDEANLEF 255
           R   K+          + I EQ  +  L       DE+  + 
Sbjct: 240 RDGAKNQRGSAVNFTSDLIGEQQWQGQLIRTEGAIDESAQQL 281



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 48/155 (30%), Gaps = 14/155 (9%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           + + +   E     + D+   +        E++       N  +++ E          ++
Sbjct: 82  IDINEQFREGGFFEKGDVL-LQLDDRDLKAEVKSAQANLLNAEQNLLEEQARGRQALTDW 140

Query: 259 LKEISR-----------DLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            +  +             L   Q       ++L   +   E+  I +P AG ++ N+S  
Sbjct: 141 QRLGNESEPSILVLRKPQLAAAQAQVLSAQAQLEKAQLNLERTKIKAPYAGRVL-NRSVD 199

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHV 342
                  +  L  I   +    IR  +  K +  +
Sbjct: 200 LGQVVSNNMQLATIY-ATDSVEIRLPIKNKDLPFI 233


>gi|293414623|ref|ZP_06657272.1| membrane fusion protein [Escherichia coli B185]
 gi|291434681|gb|EFF07654.1| membrane fusion protein [Escherichia coli B185]
          Length = 384

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 84/265 (31%), Gaps = 17/265 (6%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           E++    GII+K   + G  +  G PL   +        +  + +++  +  +  +    
Sbjct: 70  EVRPQVGGIIQKRLFKEGDLVKAGQPLYQIDAASYQAAWNETRAALQQAQALVKADCQKA 129

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                +Y  L K     ++   D         + V     +     + +  T + +    
Sbjct: 130 ----QRYARLVKENGVSQQDADDAQSTCAQDKASVEAKKAALETARINLDWTTVTAPISG 185

Query: 178 RLDLENKS--SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           R+ + + +  +L+ A   +    +  +  ++     S  DL +      K +L    +  
Sbjct: 186 RIGISSVTPGALVTASQDTALTTIRGLDTMYVDLTRSSVDLLRLR----KQSLATNSDTM 241

Query: 236 EQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT---- 291
               +L       ++  LE      + S      +  F +   +L      R +      
Sbjct: 242 SVSLILEDGTTYSEKGRLELTEVAVDESTGSVTLRAIFPNPQQQLLPGMFVRARVDEGVM 301

Query: 292 ---ILSPIAGTIVYNQSFSSSNYAQ 313
              IL+P  G     +  +++    
Sbjct: 302 EDAILAPQQGVTRDAKGNATALVVN 326


>gi|261392064|emb|CAX49557.1| membrane fusion protein MtrC [Neisseria meningitidis 8013]
          Length = 412

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 2/170 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GII+K   + GS +  G PL   +       ++  +  +   +  +   K+  D
Sbjct: 75  VRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEANLESARAQLATAQATLA--KADAD 132

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  V  +A   +E        +      K     I S   +L              
Sbjct: 133 LARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQAAIKSAGINLNRSRITAPISGFIG 192

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               ++ +LL A  ++    +     ++     S +++ +  R + +  L
Sbjct: 193 QSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKL 242


>gi|317049350|ref|YP_004116998.1| RND family efflux transporter MFP subunit [Pantoea sp. At-9b]
 gi|316950967|gb|ADU70442.1| efflux transporter, RND family, MFP subunit [Pantoea sp. At-9b]
          Length = 422

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/145 (8%), Positives = 54/145 (37%), Gaps = 4/145 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + +++ G ++   +V  + S  +G ++K     G ++  G  L   +      
Sbjct: 85  ASTADVPVYLNALGTVIPNASV-TVTSRVAGQLEKVYFTEGQKVAAGQLLAQIDPRSYQA 143

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +   +  +   +  + + +  L     L  +  +  +  +++   +  + G   +  ++
Sbjct: 144 TLAQYQGDLAQNQALLKSAQLTLTRYQKLYAQDSLARQDLDTQTATVGQYRGAVAADEAQ 203

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYL 176
           + +  +   Y  +   ++    + L
Sbjct: 204 IASAKLDIEYSRITSPVSGRVGLRL 228



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 63/187 (33%), Gaps = 9/187 (4%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNM---LRHINELYDEANLEFANYL 259
           + +     ++Q D    +  + +   +L +N    K+    L    +LY + +L   +  
Sbjct: 125 QKVAAGQLLAQIDPRSYQATLAQYQGDLAQNQALLKSAQLTLTRYQKLYAQDSLARQDLD 184

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPL- 318
            + +  + Q +   A + +++   +   E   I SP++G +   +     N  Q +    
Sbjct: 185 TQTAT-VGQYRGAVAADEAQIASAKLDIEYSRITSPVSGRV-GLRLVDPGNMIQTTDTTG 242

Query: 319 MKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF--PHYADIREKKF-KAIIEKIDPIIS 375
           + +V   +   +   V    I  + K            +         + ++  I   I 
Sbjct: 243 IVVVTQMQPAAVTFSVPQSNIPQLTKALHNDQSLPATAFDQDNTTVLAQGVVRYIGNQID 302

Query: 376 QQDNNLQ 382
                ++
Sbjct: 303 TSTGTIE 309


>gi|239994874|ref|ZP_04715398.1| acriflavine resistance protein a precursor [Alteromonas macleodii
           ATCC 27126]
          Length = 381

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 42/106 (39%), Gaps = 5/106 (4%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
            G +        ++    G+I +   E G+ + +G  L   ++      ++  K  +K++
Sbjct: 57  PGRVSPSRQSQ-VRPQVDGVITERLFEEGAHVEKGQQLYQIDEARYLAQLNSAKADLKSV 115

Query: 107 RCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           + ++ T    L+    +YD L       +++  D + +     + +
Sbjct: 116 QANLKT----LEAKARRYDDLVAQNAVSKQEYDDVIAQKDQAQAAI 157



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 83/266 (31%), Gaps = 33/266 (12%)

Query: 172 RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA----------VSQNDLNQQER 221
           +   ++ + L  + S  R      Q D  + + LFE+ A          + +     Q  
Sbjct: 47  QEPVVHEMVLPGRVSPSRQSQVRPQVDGVITERLFEEGAHVEKGQQLYQIDEARYLAQLN 106

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
                   ++ N+   +   R  ++L  +  +    Y  ++    +Q Q   +   + + 
Sbjct: 107 SAKADLKSVQANLKTLEAKARRYDDLVAQNAVSKQEY-DDVIAQKDQAQAAISVAEAAVD 165

Query: 282 ILEKTREQKTILSPIAGTIVYNQSFSSSNYA--QQSQPLMKIVPHSKLTYIRAKVTPKQI 339
           + +       + +PI+G I      +        QSQ L  I       +I  + +   I
Sbjct: 166 VAKVNMGYTKVYAPISGRISR-SFVTEGTLVTTNQSQQLATIT-QLDPVFIDMQESGASI 223

Query: 340 QHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT----- 394
             +++               +      +  +D +  ++ +   + ++ EV +  T     
Sbjct: 224 ITLRQSM-----------RNQGSMDVELT-VDEVTGKRYDQTGSVKFSEVTVDETTGSVT 271

Query: 395 -DLAFSDNNIELRNGFPAEVLFTAKN 419
                 + +  L  G   +       
Sbjct: 272 LRAEMPNPDGVLLPGLFVKGHVITGR 297


>gi|146342523|ref|YP_001207571.1| putative accessory protein to ABC-type macrolide transport protein
           MacB [Bradyrhizobium sp. ORS278]
 gi|146195329|emb|CAL79354.1| putative accessory protein to ABC-type macrolide transport protein
           MacB [Bradyrhizobium sp. ORS278]
          Length = 430

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 50/138 (36%), Gaps = 3/138 (2%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE +V ++G +     +V + +  SG +    V+ G ++  G  +   + +     +   
Sbjct: 68  IEQTVLATGTLKPV-KLVAVGAQASGRLVALNVKLGQKVKAGELIAEIDSLTQQYTLRTN 126

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
           + +++N+R   D +++ L          +     +     D+         K     I+ 
Sbjct: 127 EAALRNVRAQRDEKQATLALAEANLARQQTTLAQKASSRADYDSA--EATVKQTQAQIAQ 184

Query: 160 VYRSLKMKLTRMRSIYLN 177
           +   L      + +  +N
Sbjct: 185 LEAQLVEAEVAIETARVN 202



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 54/173 (31%), Gaps = 9/173 (5%)

Query: 178 RLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQ 237
           +L  + K+  L A + S  +  T+  N      V      + +R   ++TL L E    +
Sbjct: 100 KLGQKVKAGELIAEIDSLTQQYTLRTNEAALRNV------RAQRDEKQATLALAEANLAR 153

Query: 238 KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
           +                    +K+    + Q +    +    +           I +PI 
Sbjct: 154 QQTTLAQKASSRADYDSAEATVKQTQAQIAQLEAQLVEAEVAIETARVNLGYTKITAPID 213

Query: 298 GTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQHVKKGYTA 348
           GT++              Q    IV     +   +R +++   +  VK G   
Sbjct: 214 GTVLSI-VTQQGQTVNAVQSAPTIVVLGQVETMTVRVEISEADVVRVKPGQNV 265


>gi|221068104|ref|ZP_03544209.1| HlyD family secretion protein [Comamonas testosteroni KF-1]
 gi|220713127|gb|EED68495.1| HlyD family secretion protein [Comamonas testosteroni KF-1]
          Length = 267

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 77/241 (31%), Gaps = 24/241 (9%)

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMK-NLFEKNAVSQNDLNQQERIVYKSTLELRENI 234
           L++ ++  + +  R    + +    + +  + E  A  Q  L  Q          L +  
Sbjct: 42  LDQREIRAQLAPRRYTTLAAEIGAKVQRLPVVEGGAFRQGQLLVQ------FDCSLPQAQ 95

Query: 235 HEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             +        E   +AN   A        +L+ +Q  +    +++        +  I +
Sbjct: 96  LNKAQAGVDATEKTWKANQRLAELNSVGKVELDISQAEWNKARAEVAANRSLLSKCQITA 155

Query: 295 PIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPH 354
           P AG +   +      YAQ  Q L+ I+       +   V  + +  +  G    VR   
Sbjct: 156 PYAGRVAEQKIR-EQQYAQPGQALLDIL-DDSALELEFLVPSRWLSWLHSGSEFQVRIDE 213

Query: 355 YADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVL 414
                 K + A ++++   +     +++              A      EL  G   +VL
Sbjct: 214 ----TGKTYPAKVQRLAARVDPVSQSVKVN-----------AAIHGKFGELIAGMSGQVL 258

Query: 415 F 415
            
Sbjct: 259 L 259


>gi|311760|emb|CAA49165.1| fcrA [Streptococcus pyogenes]
          Length = 415

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 74/187 (39%), Gaps = 6/187 (3%)

Query: 110 IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN--YGISSVYRSLKMK 167
           ++ +   +  L N+   L++A E   + + +   +  +   ++      + +    ++  
Sbjct: 139 LNNKNKQISDLTNENAQLKEAIEGYVQTIQNASREIAAKQQELAAVKSQLEAKNAEIEDL 198

Query: 168 LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
             +  S      +L+++++ L  LL S + +LT ++   +     +  L  QE  +    
Sbjct: 199 KQQDASKTEEIANLQSEAATLENLLGSAKHELTDLQAKLDTATAEKAKLESQETTLENLL 258

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
              +  + + +  L   N   ++   + A     + + LE  ++  AD  +KL    + +
Sbjct: 259 GSAKRELTDLQAKLDDANAEKEKLQSQAAA----LEKQLEATKKELADLQAKLAATNQEK 314

Query: 288 EQKTILS 294
           E+    +
Sbjct: 315 EKLEAEA 321


>gi|326929984|ref|XP_003211133.1| PREDICTED: citron Rho-interacting kinase-like [Meleagris gallopavo]
          Length = 2039

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 16/217 (7%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L   E+    DL D  K +++N+    + E      +  +   +  A +S+   L   + 
Sbjct: 725 LKVLENQMKKDLAD--KEALENMLRRHEEEAREKCKVLAEQKAMINAMDSKIRSLEQRIV 782

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +         N  + +  R++K +   +  +   +  LE ++  L A     ++ L   +
Sbjct: 783 ELSEANKLAANSSLFT-QRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQL---E 838

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-------- 255
            +  ++   +N L + E  + +  LE  E   E K  L  +     E   +         
Sbjct: 839 KMSHQDHTDKNRLLELETRLREVGLEHEEQKLELKRQLTELQLTLQERESQITGLQAART 898

Query: 256 --ANYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
              N L+E   +LE+      +E+  LT      ++K
Sbjct: 899 ALENQLREAKTELEETTAEAEEEIQALTAHRDEIQRK 935



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 90/268 (33%), Gaps = 25/268 (9%)

Query: 39   PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
             ++ +  +S E++      E+        ++          Q   +   +   T  +++ 
Sbjct: 973  QLDEASGASDEVV--QLRSEVDHLR----REITEREMQLTSQKQTMEALKTTCT--MLEE 1024

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN---- 154
            + + ++ L   +  ++   +   N     +  FE R  +L   L     +  +       
Sbjct: 1025 QVMDLEALNDELLEKERQWEAWRNVLGDEKSQFECRVRELQRMLDTEKQSRVRADQRITE 1084

Query: 155  -------------YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                           I ++ ++LK +  +  S+     DLE K ++L     S Q+ L  
Sbjct: 1085 SRQVVELAVKEHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLEMNARSLQQKLET 1144

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             + L ++    Q  L QQ  +       L + + E  +    +     +   +  N    
Sbjct: 1145 ERELKQRLLEEQAKLQQQMDLQKNHIFRLTQGLQEALDRADLLKTERSDLEYQLENIQVL 1204

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQ 289
             S +  + + T + +   +  L+   +Q
Sbjct: 1205 YSHEKVKMEGTISQQTKLIDFLQAKMDQ 1232



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 78/231 (33%), Gaps = 22/231 (9%)

Query: 72  VENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKA- 130
           V++  +   G      E I T     ++++  K  +  +     A + L N     E+A 
Sbjct: 612 VKDQGKSEAGELYCKLEKINTEQQAKIQELQEKLTKA-VKASSEATELLQNIRQAKERAE 670

Query: 131 -----FESREEQLLDFLGKYHSTCSKVFNYGISSVYRS-LKMKLTRMRSIYLNRL----- 179
                 ++RE+       K          +  + +    L+++L +    Y  +L     
Sbjct: 671 KELEKLQNREDSNESMKKKLLEAEELEEKHREAQISAQHLELQLKQKEQFYEEKLKVLEN 730

Query: 180 ----DLENKSSLLRALLSSHQKDLTMMKNLFEKNAV-----SQNDLNQQERIVYKSTLEL 230
               DL +K +L   L    ++     K L E+ A+     S+    +Q  +      +L
Sbjct: 731 QMKKDLADKEALENMLRRHEEEAREKCKVLAEQKAMINAMDSKIRSLEQRIVELSEANKL 790

Query: 231 RENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             N            E       +   YL+  +  LE   R   +++ K++
Sbjct: 791 AANSSLFTQRNMKAQEEMISELRQQKFYLETQAGKLEAQNRKLEEQLEKMS 841



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 72/247 (29%), Gaps = 40/247 (16%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA-----------LDFLNNKYDVLEKAFES 133
            L     E    I   + +   L   +   K+            +  L    D +++ FE+
Sbjct: 879  LQLTLQERESQITGLQAARTALENQLREAKTELEETTAEAEEEIQALTAHRDEIQRKFEA 938

Query: 134  REE------QLLDFLGKYHSTCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                      L + L +     +++ N    +S            +  +      L  + 
Sbjct: 939  LRNSCTVITDLEEQLNQLSEDNAELNNQNFFLSKQLDEASGASDEVVQLRSEVDHLRREI 998

Query: 186  SLLRALLSSHQKDLTMMKN---LFEKNAVSQN----DLNQQERIVYK------------- 225
            +     L+S ++ +  +K    + E+  +       +L ++ER                 
Sbjct: 999  TEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDELLEKERQWEAWRNVLGDEKSQFE 1058

Query: 226  -STLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
                EL+  +  +K      ++   E+       +KE   ++   Q+   ++  K   L 
Sbjct: 1059 CRVRELQRMLDTEKQSRVRADQRITESRQVVELAVKEHKAEILALQQALKEQKLKAESLS 1118

Query: 285  KTREQKT 291
                   
Sbjct: 1119 DKLNDLE 1125


>gi|319410963|emb|CBY91359.1| membrane fusion protein MtrC [Neisseria meningitidis WUE 2594]
          Length = 412

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 2/170 (1%)

Query: 59  IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALD 118
           +++   GII+K   + GS +  G PL   +       ++  +  +   +  +   K+  D
Sbjct: 75  VRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEANLESARAQLATAQATLA--KADAD 132

Query: 119 FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR 178
               K  V  +A   +E        +      K     I S   +L              
Sbjct: 133 LARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQAAIKSAGINLNRSRITAPISGFIG 192

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
               ++ +LL A  ++    +     ++     S +++ +  R + +  L
Sbjct: 193 QSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKL 242


>gi|297708729|ref|XP_002831109.1| PREDICTED: LOW QUALITY PROTEIN: myosin-9-like [Pongo abelii]
          Length = 1960

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 5/199 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ E+  L+  N K    +K  E R  +    L +     SK
Sbjct: 958  ARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTE-EEEKSK 1016

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +     +     R+R     R +LE     L    +     +     L  + A 
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIA---ELQAQIAE 1073

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +  L ++E  +  +   + E   ++   L+ I EL  +   E    L+       + ++
Sbjct: 1074 LKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELESQI-SELQEDLESERASRNKAEK 1132

Query: 272  TFADEMSKLTILEKTREQK 290
               D   +L  L+   E  
Sbjct: 1133 QKRDLGEELEALKTELEDT 1151



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 68/209 (32%), Gaps = 5/209 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +D   +   +      K     + + ++ +  L  +    E+A    +++  +   + 
Sbjct: 1653 ELDDTRASR--EEILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEI 1710

Query: 146  HSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             ++  K  +       +   +      +     N   + ++       +     DL + +
Sbjct: 1711 ANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLER 1770

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEI 262
            +  +KN  ++  L +Q + +     E+   +  + K  +  +     +   +  N  KE 
Sbjct: 1771 SHAQKNENARQQLERQNKELKVKLQEMEGTVKSKYKASITALEAKIAQLEEQLDNETKER 1830

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +Q +RT       L  ++  R    
Sbjct: 1831 QAACKQVRRTEKKLKDVLLQVDDERRNAE 1859



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 70/225 (31%), Gaps = 37/225 (16%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH-------------- 146
               + LR  +  +K  L+ + +  +   +  E R + L     K                
Sbjct: 897  AEAEELRARLTAKKQELEEICHDLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEE 956

Query: 147  --------------------STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                     +       + +  K+   R+     N  + E KS 
Sbjct: 957  SARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSK 1016

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L  L + H+  +T ++    +    + +L +  R +   + +L + I E +  +  +  
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKM 1076

Query: 247  LYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTRE 288
               +   E    L  +  +  Q     +   +  S+++ L++  E
Sbjct: 1077 QLAKKEEELQAALARVEEEAAQKNMALKKIRELESQISELQEDLE 1121



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 66/197 (33%), Gaps = 8/197 (4%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            S+  L       +  ++ +  + + LE   ++ E+  L       +  ++          
Sbjct: 1519 SVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDE 1578

Query: 162  RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-------EKNAVSQN 214
            +S + K   +R +     +LE++       +++ +K    +K+L        +    +  
Sbjct: 1579 QSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEAIK 1638

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             L + +  +     EL +    ++ +L    E   +     A  + ++  +L   +R   
Sbjct: 1639 QLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMI-QLQEELAAAERAKR 1697

Query: 275  DEMSKLTILEKTREQKT 291
                +   L       +
Sbjct: 1698 QAQQERDELADEIANSS 1714



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 69/211 (32%), Gaps = 12/211 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
               ++ ++   ++L+      +  +  L  + +  E A +  + + +    K      + 
Sbjct: 921  EARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLEEEQ 980

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             +       + +  K+   R+     N  + E KS  L  L + H+  +T ++    +  
Sbjct: 981  IILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNKHEAMITDLEERLRREE 1040

Query: 211  VSQNDLNQQER-------IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-- 261
              + +L +  R        +     EL+  I E K  L    E    A         +  
Sbjct: 1041 KQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKN 1100

Query: 262  -ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               + + + +   ++    L     +R +  
Sbjct: 1101 MALKKIRELESQISELQEDLESERASRNKAE 1131



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 75/235 (31%), Gaps = 29/235 (12%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D ++ +        ++ +   ++ E+            LE   +  E  +          
Sbjct: 1577 DEQSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEA 1636

Query: 149  CSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--- 203
              ++      +    R L         I     + E K   + A +   Q++L   +   
Sbjct: 1637 IKQLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMIQLQEELAAAERAK 1696

Query: 204  --------NLFE-------KNAVSQNDLNQQERIVYKSTLELRENIH-------EQKNML 241
                     L +       K A++  +  + E  + +   EL E            K   
Sbjct: 1697 RQAQQERDELADEIANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKAN 1756

Query: 242  RHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              I+++  + NLE ++  K     + LE+  +    ++ ++    K++ + +I +
Sbjct: 1757 LQIDQINTDLNLERSHAQKNENARQQLERQNKELKVKLQEMEGTVKSKYKASITA 1811



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 73/210 (34%), Gaps = 12/210 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +  D  +   +       +   AL+    +   LE+  +    ++ D +         V
Sbjct: 1461 AEERDRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSV 1520

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                    ++ + ++   T++  +       E+    L   L + +      ++L  ++ 
Sbjct: 1521 HELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFE--RDLQGRDE 1578

Query: 211  VSQNDLNQQERIVYKSTLEL-----RENIHEQKNMLRHINELYDEANLEFANY-LKEISR 264
             S+    Q  R V +   EL     + ++         ++    EA+++ AN    E  +
Sbjct: 1579 QSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEAIK 1638

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILS 294
             L + Q    D M +L   +    ++ IL+
Sbjct: 1639 QLRKLQAQMKDCMRELD--DTRASREEILA 1666


>gi|292490421|ref|YP_003525860.1| efflux transporter RND family, MFP subunit [Nitrosococcus
           halophilus Nc4]
 gi|291579016|gb|ADE13473.1| efflux transporter, RND family, MFP subunit [Nitrosococcus
           halophilus Nc4]
          Length = 416

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 53/141 (37%), Gaps = 3/141 (2%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTE--KSALDFLNNKY 124
           +++ + + G  +  G  L+  ++ E    +  ++  ++ ++  I +E  +   D    ++
Sbjct: 82  VREVKAKEGDFVSGGQLLVQLDEREAKLELAQRQADLEEIQALIASEKVRHRRDLKALEH 141

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN- 183
           +        R  +    L +   T     +    +  R      TR+ +I  ++  L   
Sbjct: 142 EKALLELSRRALERAKTLEQRKLTPRSALDEAQQAAERQALELNTRLLAIDDHQARLAQL 201

Query: 184 KSSLLRALLSSHQKDLTMMKN 204
           ++  LRA     Q  L + + 
Sbjct: 202 EARQLRAQALLVQAKLDLDRT 222


>gi|281350530|gb|EFB26114.1| hypothetical protein PANDA_000094 [Ailuropoda melanoleuca]
          Length = 2060

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 67/214 (31%), Gaps = 25/214 (11%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            ++      L  +D      I   K +++     +  EK+           ++   E  +E
Sbjct: 1716 EVEIEDLHLQIDD------IAKAKTALEEQLSRLQREKNE----------VQSRLEEDQE 1759

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             + + + K+ +  ++            +     ++      + +L+ K   L++ +   +
Sbjct: 1760 DMNELMKKHKAAVAQASRD-----LAQMNDLQAQLEEANKQKQELQEKLQALQSQVEFLE 1814

Query: 197  KDLTMMKNLFEKNAVSQNDL---NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
            + +   K+L  +      +L    + ER   K    L   + E    L    +    A  
Sbjct: 1815 QSMVD-KSLVSRQEAKIRELETRLEFERTQVKRLESLAGRLKENMEKLTEERDQRTAAEN 1873

Query: 254  EFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                  K + R L   +    +   K     + +
Sbjct: 1874 REKEQNKRLQRQLRDTKEEMGELARKEAEASRKK 1907



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 74/219 (33%), Gaps = 21/219 (9%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             ++ +    L   +      I      + + R   ++    LD    +    EK  E  +
Sbjct: 1277 EKVEKERNELRLNNDRLETRISELTSELTDERNTGESTSQLLDTETAERLRAEKEMEELQ 1336

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSS 194
             Q      +      +V    +             +R+  +N  +D ++     R     
Sbjct: 1337 TQYDALKKQMEVMEMEVMEARL-------------IRAAEINGEVDDDDTGGEWRLKYER 1383

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              +++   K   ++    + ++ QQ +R + +   +L+ +  E +  L+ + +       
Sbjct: 1384 AMREVDFTKKRLQQEFEDKLEVEQQNKRQLERRLGDLQADSDESQRALQQLKKKSQRLTA 1443

Query: 254  EFANY------LKEISRDLEQNQRTFADEMSKLTILEKT 286
            E  +        +  + +LE+ QR F  E+S+     + 
Sbjct: 1444 ELQDTKLHLEGQQVCNHELEKKQRRFDSELSQAHEEAQR 1482


>gi|270265071|ref|ZP_06193334.1| secretion protein HlyD family protein [Serratia odorifera 4Rx13]
 gi|270041005|gb|EFA14106.1| secretion protein HlyD family protein [Serratia odorifera 4Rx13]
          Length = 323

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/342 (12%), Positives = 113/342 (33%), Gaps = 39/342 (11%)

Query: 17  LKRMTLLSIIGIIGLITWSILLP-------IEISVSSSGEILNEDNVVEIKSPFSGIIKK 69
           +K+ TL +++ ++  I  +IL         ++  V +  E++             G + +
Sbjct: 1   MKKKTLFTLLLMVVAIALAILFRAHNQDLLLQGEVDAP-EVIVASKAK-------GRVIE 52

Query: 70  FQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEK 129
             VE G  +  G  ++  +  E    +   + +    +  +  E+S           L  
Sbjct: 53  RLVERGDDVKGGQAMIQLDSPELMAQLRSAQATRDEAKAQL--EQSLHGTREESIRNLRA 110

Query: 130 AFESREEQLLDFLGKYHSTCSKVFNYGI--SSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
           +    E +  +    Y+   S      I  S +  S + + T  + +   + +L+   + 
Sbjct: 111 SLAQAEAEYRNAQNDYNRNLSIAGKGYISKSELDSSRRSRDTAFQQVQAAKANLDEGVNG 170

Query: 188 LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
            R  +   Q+    ++   E+N +         R++     E+     E   +L   + L
Sbjct: 171 DR--IELRQQYAAALRA-AEENLLEVKAQTDDLRVLAPVDGEVGPIPAEVGELLNAGSPL 227

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL--SPIAGTIVYNQS 305
                +  A ++  +  D+  + R       ++  L+    +  +   +P+        +
Sbjct: 228 VTLIRVPDAYFVFNLREDILAHVRKGDKIQMRVPALQNKMIEAEVRYIAPLGDYATKRAT 287

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQ-IQHVKKGY 346
            ++                  L     ++ P Q +  ++ G 
Sbjct: 288 RATG--------------DFDLKTFEVRLYPSQPVDGLRPGM 315


>gi|300773466|ref|ZP_07083335.1| AcrA/AcrE family multidrug resistance protein [Sphingobacterium
           spiritivorum ATCC 33861]
 gi|300759637|gb|EFK56464.1| AcrA/AcrE family multidrug resistance protein [Sphingobacterium
           spiritivorum ATCC 33861]
          Length = 400

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 65/174 (37%), Gaps = 2/174 (1%)

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
            VEI+    GI+    V+ G ++ +G  L    D    + ++  K +++  +  +  E +
Sbjct: 82  NVEIRPQIEGILDHIYVDEGQKVTKGQLLFKINDRPYQEQLNQAKANLQVAQASL--ENA 139

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIY 175
            L+       V  K     + Q             +     I +   ++   L R  S  
Sbjct: 140 ELEVEKKNRLVNNKVLTDFQLQTAVSARNAAKASVQQAKSAIEAAKINVGYTLIRASSDG 199

Query: 176 LNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
                 + + SL+  + +     L+ +++L    ++S+ND  Q +      ++E
Sbjct: 200 YIGRLQKKQGSLITPMDAQALTGLSDIRDLHVYFSLSENDFVQFKNNAKGKSIE 253


>gi|288942230|ref|YP_003444470.1| RND family efflux transporter MFP subunit [Allochromatium vinosum
           DSM 180]
 gi|288897602|gb|ADC63438.1| efflux transporter, RND family, MFP subunit [Allochromatium vinosum
           DSM 180]
          Length = 392

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 53/150 (35%), Gaps = 4/150 (2%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G++   D +    +P +G + + +V +G ++  G  L   +  +    +   +  ++  R
Sbjct: 58  GQVEAPDRIQA-AAPVAGRLLEVRVRDGERVAAGALLARLDPRDLQPRLTRAQADLEKER 116

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG---KYHSTCSKVFNYGISSVYRSL 164
             +  ++ AL+       +  +A E  E      LG          +     +S + R  
Sbjct: 117 LKLVHDRQALEQEREILRLARQALERAETVQSKQLGSASSVDEAREQYARAQLSVMLREQ 176

Query: 165 KMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            +     R   L     E +  L R  + +
Sbjct: 177 SIAEHPARLASLESALAEAERDLARGTIRA 206


>gi|218460052|ref|ZP_03500143.1| putative protein secretion protein, HlyD family [Rhizobium etli Kim
           5]
          Length = 272

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 65/212 (30%), Gaps = 20/212 (9%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
           A   +    Q R    +      N  E     R + +    A    A  +    + +E  
Sbjct: 1   ARPAHRGAGQCRTGQAAAGPRPGNGQEGHGFHRQVEQADATAAAANARVVS-AEQAIEVA 59

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNY-AQQSQPLMKIVPHSKLT 328
           +       S++   +    +  + +P+AGTI   ++       A    PL  ++    + 
Sbjct: 60  EADLKVFDSQIADADLKLARTDVKTPVAGTI-SAKNAKVGAIAAGNGDPLFTLIRDGDIE 118

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
            + A+V    I  +  G  AT+          +K    +  + P +              
Sbjct: 119 LV-AEVAESDIVRIMAGQKATISLSG----SREKLSGAVRLVSPTVDPATRLG------L 167

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           V + I D + +      R+G         + T
Sbjct: 168 VHISIDDDSKA------RSGMYGSAEIIVRET 193


>gi|182412946|ref|YP_001818012.1| RND family efflux transporter MFP subunit [Opitutus terrae PB90-1]
 gi|177840160|gb|ACB74412.1| efflux transporter, RND family, MFP subunit [Opitutus terrae
           PB90-1]
          Length = 408

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 68/174 (39%), Gaps = 9/174 (5%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +    N V +K+   G + +   E G ++ +G  L   +      ++   +  ++ 
Sbjct: 71  AIGTVTP-LNTVTVKARVPGQLLRIAFEEGQRVERGQVLAEIDPAPYRIVLAQAEGRLQQ 129

Query: 106 LRCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
               +++ +S  +    L+ +  V ++  + ++  + +  G   +  ++V +  +   Y 
Sbjct: 130 AMAQLESARSDFERTTNLHRQNLVTDQQLQLQDALVAERAGAVATAQAQVEDARLQLSYT 189

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
            ++  +     +    +      +L+R   ++    LT  + +     + + DL
Sbjct: 190 RVEAPIAGRAGLRRVDVG-----NLIREGDTNGLVVLTQTRPITVTFTIPEVDL 238


>gi|167911293|ref|ZP_02498384.1| HlyD family secretion protein [Burkholderia pseudomallei 112]
          Length = 404

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/191 (9%), Positives = 60/191 (31%), Gaps = 3/191 (1%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGII 67
             KR     L  + ++ ++ ++G   W          +       + N + I    SG +
Sbjct: 58  ERKRPGKKPLVVLAIIVVLLLVGAFVW-WFATRNQVSTDDAY--TDGNAITIAPKVSGYV 114

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
               +++   + +G  LL  +  +    +D  +  +   +  +D  +  LD  + ++   
Sbjct: 115 VALAIDDNVYVHRGDLLLVIDQRDYQAQVDAARAQLGLAQAQLDAAQVQLDIAHVQFPAQ 174

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSL 187
            +  +++ E       +  +   +       +  +         R      +      + 
Sbjct: 175 YRQAQAQIEAAQASFRQALAAYERQHAVDARATSQQAIDVADAQRLTADANVATARAQAR 234

Query: 188 LRALLSSHQKD 198
             +L+    + 
Sbjct: 235 TASLVPQQIRQ 245


>gi|145610539|ref|XP_001410423.1| hypothetical protein MGG_11427 [Magnaporthe oryzae 70-15]
 gi|145017905|gb|EDK02184.1| hypothetical protein MGG_11427 [Magnaporthe oryzae 70-15]
          Length = 996

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 69/205 (33%), Gaps = 12/205 (5%)

Query: 92  TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
           + +L+D  +  ++     +   +  +  L+ +    +      +E  +  L +      K
Sbjct: 672 SRELVDGLRSQLEERDLELQEARLKVASLDGQLGQEQADHRRTKESQVGELARL-----K 726

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS--SLLRALLSSHQKDLTMMKNLFEKN 209
             N  +  V+     KL        N L  + K+    LR  +   Q+     ++   + 
Sbjct: 727 TVNESLQKVHEEETAKLKIQHQARENELQRQQKAKEDELRRQIEQLQRQQKAKEDDLARQ 786

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
             ++ D  +++    KST        E   + +      + A  E     K  + +LE+ 
Sbjct: 787 HKAREDELRRQLDQAKSTSA-----AEVDKVKKTAQADAERAQREAEQVKKSSTAELERA 841

Query: 270 QRTFADEMSKLTILEKTREQKTILS 294
           QR     ++ L       E   + +
Sbjct: 842 QRRSEAALADLKATISRLEVDLMKA 866


>gi|15605827|ref|NP_213204.1| hypothetical protein aq_294 [Aquifex aeolicus VF5]
 gi|2982989|gb|AAC06602.1| putative protein [Aquifex aeolicus VF5]
          Length = 371

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 88/271 (32%), Gaps = 45/271 (16%)

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            +K     +  +   L+    ++R         E K   LR  +   ++ L   K L+EK
Sbjct: 84  QNKPLEEKVKILEIQLQNLKEKIREDSPFIRAYELKIKALREEVKELEEKLKRRKRLYEK 143

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
             +S+ +    +R        L+                             E    +E+
Sbjct: 144 ELISKEEYESLKRKYRAKLESLKA-------------------------LESEFKESVEE 178

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ---SQPLMKIVPHS 325
            +R   +  + L   ++   + T+ SPI G I+         Y      ++PL  +V ++
Sbjct: 179 VRRKIREVKANLEKAKEELGEYTVRSPIDGVILKKNV-EVGEYVNTFMETKPLF-VVGNT 236

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           +      +V  +    VKKG    V      D   K FK  I K+   + ++        
Sbjct: 237 EKLKTYLEVDEEYSSLVKKGQEVYVSVESLKD---KLFKGKIVKVHKKVDEKKK------ 287

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
            + V  ++      D + ++  G   E    
Sbjct: 288 VFLVEAEV------DYSEKVLPGTTVEGYIV 312



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 70/165 (42%), Gaps = 7/165 (4%)

Query: 39  PIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDL 98
            +E +V ++G +    N VE+K+  +G + +   + G ++ +G PL   ++    + + +
Sbjct: 36  KVEKTVYATGYVK-ALNEVEVKAKVAGYVSEVYKDVGQKVKKGEPLARIQNKPLEEKVKI 94

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            ++ ++NL+  I   + +      +  +     E +E +      K       +      
Sbjct: 95  LEIQLQNLKEKI--REDSPFIRAYELKIKALREEVKELEEKLKRRKRLYEKELISKEEYE 152

Query: 159 SVYRSLKMKLTRMRSIYLN----RLDLENKSSLLRALLSSHQKDL 199
           S+ R  + KL  ++++         ++  K   ++A L   +++L
Sbjct: 153 SLKRKYRAKLESLKALESEFKESVEEVRRKIREVKANLEKAKEEL 197


>gi|1903280|emb|CAA98620.1| USO1 [Saccharomyces cerevisiae]
          Length = 1268

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 94/226 (41%), Gaps = 20/226 (8%)

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++ +    L  E I+        K  + +LR ++++ +   + L  +    E+   ++E 
Sbjct: 592 EVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKER 651

Query: 137 QLLDFLGKYHS--TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           Q  + + + +   T ++  N  I      L+ ++  M+S    + +L  K S + AL   
Sbjct: 652 QYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNL--KKSEIDALNLQ 709

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN-- 252
                  +K L +KN  ++  L +  + V   T++++E   E     + ++EL D+    
Sbjct: 710 -------IKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKAS 762

Query: 253 -------LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                  LE     ++I  +L+        ++ K+T L K +E+  
Sbjct: 763 EDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKSE 808



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 11/203 (5%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           ++    D  +  I  L+  ++T  +A D   NK   L K  E  E +L  +    +   +
Sbjct: 522 KSDSSKDEYESQISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELET 581

Query: 151 KVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH---QKDLTMMKNL 205
           K+      +  V  + +        +     + + + + LRA L S     +DL      
Sbjct: 582 KLETSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKK 641

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
           +E+   ++      ER   +   +L + I   +     I +  DE   E           
Sbjct: 642 YEEQIANK------ERQYNEEISQLNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQ 695

Query: 266 LEQNQRTFADEMSKLTILEKTRE 288
               +        ++  L+K  E
Sbjct: 696 SNLKKSEIDALNLQIKELKKKNE 718


>gi|88703609|ref|ZP_01101325.1| HlyD family secretion domain protein [Congregibacter litoralis
           KT71]
 gi|88702323|gb|EAQ99426.1| HlyD family secretion domain protein [Congregibacter litoralis
           KT71]
          Length = 358

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 17/177 (9%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + E   E +             L+Q++        +L  ++   + K I +P AG
Sbjct: 113 EARLRLAEQLYERDARLIKENSIPQSQLDQSRSDLQSARGELAEVDAVLQNKRISAPFAG 172

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
             +        +Y +   PL+ +        +   V  +    ++ G    +R   + D 
Sbjct: 173 R-LGIFQVRLGDYVEAGTPLVTLQ-DVSRLEVDFSVPDRYAPLMQPGLKIVLRTAAFPDR 230

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           R   F A ++ +D  I +   NLQ      V   + +         L  G  A ++ 
Sbjct: 231 R---FSATLQAVDSQIDESTRNLQ------VRASVDE------GDGLLPGMFASLII 272



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 32/118 (27%), Gaps = 11/118 (9%)

Query: 63  FSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNN 122
            SG I      +G  +  G PL+  +           +      R  ++      + L  
Sbjct: 76  TSGDITAVHASSGDSVEAGDPLINID-----------EAFEVATRTRLEARLRLAEQLYE 124

Query: 123 KYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD 180
           +   L K     + QL        S   ++         + +         I+  RL 
Sbjct: 125 RDARLIKENSIPQSQLDQSRSDLQSARGELAEVDAVLQNKRISAPFAGRLGIFQVRLG 182


>gi|325109462|ref|YP_004270530.1| efflux transporter RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
 gi|324969730|gb|ADY60508.1| efflux transporter, RND family, MFP subunit [Planctomyces
           brasiliensis DSM 5305]
          Length = 468

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/184 (10%), Positives = 62/184 (33%), Gaps = 26/184 (14%)

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            + +   +  +   ++     +  + +   + +   +LL+  L   +++L  M  LF + 
Sbjct: 109 ERTYQLAVERLREEVEQAQNSLDELEVELQNNDALIALLQEDLQLKKRELDRMNKLFSRG 168

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            ++++++++       +   L                          N  ++     ++ 
Sbjct: 169 VLNESEVDEYRAKELSARNAL----------------------TLQQNNRRKADSSRDRL 206

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           + +     ++L   E   ++  I++PI G +V        NY      L+ I      + 
Sbjct: 207 RNSLDLARTRLAEAELELQKSKIVAPIDGVVVTESV-EEGNYVSAGTELVTI---DDTSA 262

Query: 330 IRAK 333
              +
Sbjct: 263 AEVR 266



 Score = 43.5 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 61/174 (35%), Gaps = 8/174 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQV-ENGSQILQGTPLLTFEDIETTD 94
               ++I     G ++    V         I +K      G  +  GTPLL  ++     
Sbjct: 57  AAAELDIVT--DGRVVPFREVRLSAEVSGRITRKTDACRAGRYVTAGTPLLEIDERTYQL 114

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF-----LGKYHSTC 149
            ++  +  ++  +  +D  +  L   +    +L++  + ++ +L         G  + + 
Sbjct: 115 AVERLREEVEQAQNSLDELEVELQNNDALIALLQEDLQLKKRELDRMNKLFSRGVLNESE 174

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              +     S   +L ++    R    +R  L N   L R  L+  + +L   K
Sbjct: 175 VDEYRAKELSARNALTLQQNNRRKADSSRDRLRNSLDLARTRLAEAELELQKSK 228


>gi|262404158|ref|ZP_06080713.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio sp.
           RC586]
 gi|262349190|gb|EEY98328.1| probable Co/Zn/Cd efflux system membrane fusion protein [Vibrio sp.
           RC586]
          Length = 364

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 4/168 (2%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN-- 121
           SG +    V+ G Q+ +G  L T +  +    ++   + +KN        K+  +     
Sbjct: 77  SGRLTDIAVKEGDQVKKGQRLATLDARDAKTALEAALLELKNTEQEYRRAKAIFEKTQAI 136

Query: 122 --NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRL 179
              + D +   ++  + ++ D   K   T       GI S          +   + +   
Sbjct: 137 SKAELDKVTNRYDLAKNRVEDAKRKLEYTQITAPFDGIISEKLVENFAQVQANQVIMTLQ 196

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
           DL +    +          +   + + E +A+       Q R      
Sbjct: 197 DLSDLEVAIEIPHRVMISGVRNTRAIAELSAIPGQQFPLQLRTYSTQA 244



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 69/202 (34%), Gaps = 19/202 (9%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
            + + +R+      + +  +      L++  + Y  A   F         +L++    + 
Sbjct: 90  QVKKGQRLATLDARDAKTALEAALLELKNTEQEYRRAKAIFEKTQAISKAELDKVTNRYD 149

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS-KLTYIRAK 333
              +++   ++  E   I +P  G I      + +   Q +Q +M +         +  +
Sbjct: 150 LAKNRVEDAKRKLEYTQITAPFDGIISEKLVENFAQV-QANQVIMTL--QDLSDLEVAIE 206

Query: 334 VTPK-QIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILK 392
           +  +  I  V+    A          +         ++    +Q +++ QT   Y V+L 
Sbjct: 207 IPHRVMISGVRN-TRAIAELSAIPGQQFPL------QLRTYSTQANSDSQT---YSVVLG 256

Query: 393 ITDLAFSDNNIELRNGFPAEVL 414
             DL        +  G  A+V+
Sbjct: 257 FEDL----KGFRVMPGMSAKVI 274


>gi|209965842|ref|YP_002298757.1| efflux transporter, RND family, MFP subunit, putative
           [Rhodospirillum centenum SW]
 gi|209959308|gb|ACI99944.1| efflux transporter, RND family, MFP subunit, putative
           [Rhodospirillum centenum SW]
          Length = 363

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/210 (11%), Positives = 73/210 (34%), Gaps = 11/210 (5%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V  + L  Q + +      L+    + +       +L+    +  A  L +    +   +
Sbjct: 113 VGDDKLVLQIKALDAQIAALQAQRDQARTDFDRAEDLFRRGTVPKA-RLDDARTAVSVAE 171

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
                  ++  ++E+   +  +L+P+AG ++     +     Q  + + +I        +
Sbjct: 172 NGLKARTAERAVVERQLAEGVVLAPVAGRVLQVPV-TVGTVMQPGETVAQI--AEGGFKL 228

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--DPIISQQDNNLQTQEYYE 388
           R +V  +    ++ G   T+  P  A   + +   +  +I    +++  +       +  
Sbjct: 229 RLRVPERHASSIRAGDPVTLEAPDGAGREDGRVVLVYPQIEDGRVVADAEVADLGDYFVG 288

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAK 418
             +++  ++  D    +  G       T +
Sbjct: 289 QRVRVW-VSAGDRPAIVVPG----AFVTTR 313



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 41/137 (29%), Gaps = 20/137 (14%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           ++   +E +      +              G +   +V  G ++  G P+ T  D     
Sbjct: 72  AVFATVESANVVPARV-----------RIGGTLADLRVAYGDKVDLGQPVATVGD----- 115

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             D   + IK L   I   ++  D     +D  E  F  R   +         T   V  
Sbjct: 116 --DKLVLQIKALDAQIAALQAQRDQARTDFDRAEDLF--RRGTVPKARLDDARTAVSVAE 171

Query: 155 YGISSVYRSLKMKLTRM 171
            G+ +      +   ++
Sbjct: 172 NGLKARTAERAVVERQL 188


>gi|77457306|ref|YP_346811.1| secretion protein HlyD [Pseudomonas fluorescens Pf0-1]
 gi|77381309|gb|ABA72822.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
          Length = 366

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/128 (10%), Positives = 44/128 (34%), Gaps = 6/128 (4%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI---DTEKSALDFL 120
            G + +  V+ G ++    PL   +  +    ++  +  +     ++     E+     L
Sbjct: 66  GGKVSRRLVDEGQRVKADQPLAELDPQDVRLQLEATRAQVAAAEANLNLVRAERDRYKTL 125

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRM---RSIYLN 177
             +  V   A+++ E        +     ++       + Y  L+     +   RS+ + 
Sbjct: 126 MERQMVSRSAYDNAENLYRSGEARLKQIKAEFNVSTNQASYAVLRAPQDGVVAKRSVEVG 185

Query: 178 RLDLENKS 185
           ++    ++
Sbjct: 186 QVVAAGQT 193



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/231 (9%), Positives = 58/231 (25%), Gaps = 25/231 (10%)

Query: 203 KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN---------ELYDEANL 253
           + L ++    + D    E       L+L     +      ++N         +   E  +
Sbjct: 71  RRLVDEGQRVKADQPLAELDPQDVRLQLEATRAQVAAAEANLNLVRAERDRYKTLMERQM 130

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
              +            +       ++  +         + +P  G +V  +S        
Sbjct: 131 VSRSAYDNAENLYRSGEARLKQIKAEFNVSTNQASYAVLRAPQDG-VVAKRSVEVGQVVA 189

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             Q +  +        +   +  +     K G   +V        + ++F   I ++ P 
Sbjct: 190 AGQTVFTLA-TDGEREVLISLPEQSFGRFKVGQPVSVEL---WTQQNQRFAGQIRELSPA 245

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQ 424
              +                  ++F+   +    G  A V     +     
Sbjct: 246 ADPKSRTFA-----------ARISFTSGKVPAELGQSARVFVQTADVIPLS 285


>gi|84390430|ref|ZP_00991441.1| hypothetical protein V12B01_11685 [Vibrio splendidus 12B01]
 gi|84376690|gb|EAP93566.1| hypothetical protein V12B01_11685 [Vibrio splendidus 12B01]
          Length = 377

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 65/195 (33%), Gaps = 12/195 (6%)

Query: 36  ILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDL 95
               IE    + G I+   + V IKS   GI+ +     G  + QG PL+      T   
Sbjct: 38  ATGTIEKQAVAVGYIVPA-HSVSIKSQIDGIVGEIYAGVGEYVTQGQPLIKVRPNPTPKA 96

Query: 96  IDLKKVSIKNLRCHIDTEKSALDFLNN--KYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
           +      +     +I++ K  L  L +  + +++ K ++       +          K  
Sbjct: 97  LTDASTELMRSEANIESAKQQLANLQSLVEQEIIPKNYDEYVTARSNVKSAQADVMQKRQ 156

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSSHQKDLTMMKN 204
           N  +     S         +IY               E   S   +  ++    L  M +
Sbjct: 157 NLELIQSGESTIGNSRLTSTIYAPIDGTVLNRKVEVGEPIISTESSQAATEMMSLADMNS 216

Query: 205 LFEKNAVSQNDLNQQ 219
           L  K +VS++D  Q 
Sbjct: 217 LIFKGSVSEHDAAQL 231



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 74/218 (33%), Gaps = 31/218 (14%)

Query: 221 RIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-----------ANYLKEISRDLEQN 269
           + +  ++ EL  +    ++  + +  L      E             + +K    D+ Q 
Sbjct: 95  KALTDASTELMRSEANIESAKQQLANLQSLVEQEIIPKNYDEYVTARSNVKSAQADVMQK 154

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVP 323
           ++      S  + +  +R   TI +PI GT++  +              Q +  +M +  
Sbjct: 155 RQNLELIQSGESTIGNSRLTSTIYAPIDGTVLNRKV-EVGEPIISTESSQAATEMMSLA- 212

Query: 324 HSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI---DPIISQQDNN 380
                  +  V+      +  G   T+    Y  I   + + ++ KI      ++   ++
Sbjct: 213 DMNSLIFKGSVSEHDAAQLTPGMPVTLTVAPYPSI---EIEGVLTKIAIQSESLNATADS 269

Query: 381 LQTQEY---YEVILKITDLAFSDNNIELRNGFPAEVLF 415
              + +   +EV +          ++ LR+GF +    
Sbjct: 270 SSGKSFDNGFEVEV---GELKIPQDVRLRSGFSSSAQI 304


>gi|83956103|ref|ZP_00964585.1| cation efflux family protein [Sulfitobacter sp. NAS-14.1]
 gi|83839669|gb|EAP78848.1| cation efflux family protein [Sulfitobacter sp. NAS-14.1]
          Length = 456

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 74/226 (32%), Gaps = 25/226 (11%)

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
           L   + L      SQ  + Q   ++    LE  E +  QK +    N     A  E A  
Sbjct: 172 LITSRELA--GLKSQWIIAQTNEVLAAQALERLEGLWAQK-ITSEANVQTARAEHESAKT 228

Query: 259 LKEISRDLEQNQRTFADEMSKLTILEKTREQKT-ILSPIAGTIVYNQSFSSSNYAQQSQ- 316
             E +             + K+   +        + +P+AGTIV  ++ +          
Sbjct: 229 ESEAAETELHAVGIDHAALEKIAAAQDGNNANAYLTAPLAGTIVR-RAATLGETVTAGDS 287

Query: 317 ---PLMKIVPHSKLTYIRAKVTP--KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID 371
               L  IV     + + A +    + I  V+ G    ++      I +    + +  I 
Sbjct: 288 SAKVLFTIV---DDSVVWADIAVYKQDISRVRVGAPVALKSDAGDVIAQ----STVAFIL 340

Query: 372 PIISQQDNNLQTQEYYEVILKITDLAFSDNNI---ELRNGFPAEVL 414
           P+I +            VI+  +D   +       +L  G  AEVL
Sbjct: 341 PVIDEVSRTATA----RVIIDNSDRTLTPGQFVIADLSVGNAAEVL 382


>gi|325854992|ref|ZP_08171708.1| efflux transporter, RND family, MFP subunit [Prevotella denticola
           CRIS 18C-A]
 gi|325483970|gb|EGC86910.1| efflux transporter, RND family, MFP subunit [Prevotella denticola
           CRIS 18C-A]
          Length = 443

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/168 (10%), Positives = 49/168 (29%), Gaps = 7/168 (4%)

Query: 42  ISVSSSGEILNEDNVVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLI 96
            + ++  +      +  ++        SG I K  V  G  +  G  L   ++      +
Sbjct: 39  GASNAQLKTTYPATIKGVQDVEVRPKVSGFITKLNVHEGEYVRAGQVLFVIDNATYQAAV 98

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
              +  + + +  +   ++ +   N   +       +      +    Y++    + +Y 
Sbjct: 99  RQAQAQVNSAQSSVAQAQAGVVQANASLNSANAQAATSRLTYSNSKNLYNNKV--IGDYE 156

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           + S   + +     +R                 A +   Q  L   K+
Sbjct: 157 LQSAKNAYETAQAAVRQAQSGVASANAAVRQAEAGVRQAQAMLASAKD 204


>gi|303252217|ref|ZP_07338385.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307245447|ref|ZP_07527535.1| hypothetical protein appser1_6520 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307247560|ref|ZP_07529604.1| hypothetical protein appser2_5550 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307254401|ref|ZP_07536239.1| hypothetical protein appser9_6490 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307258860|ref|ZP_07540592.1| hypothetical protein appser11_6580 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|302649000|gb|EFL79188.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|306853788|gb|EFM86005.1| hypothetical protein appser1_6520 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306855925|gb|EFM88084.1| hypothetical protein appser2_5550 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306862700|gb|EFM94656.1| hypothetical protein appser9_6490 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306867211|gb|EFM99067.1| hypothetical protein appser11_6580 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
          Length = 401

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 50/124 (40%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + K  V +G ++ +G  L+ F+       +   +  + N++ + +  ++ +   +  
Sbjct: 88  SGTVTKVHVRSGQRVNKGDLLVEFDSAVEEATLRASQAQLPNVKANYERYRNLIASNSAS 147

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               + A  +  + L +      S   +      + +   + + + +  +     + +E+
Sbjct: 148 KAEFDNAQSAYNQLLANIESLKASIARRKVYAPFNGLAGIVNVNVGQYITTGTQIVRVED 207

Query: 184 KSSL 187
           +SS+
Sbjct: 208 QSSM 211



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 60/199 (30%), Gaps = 22/199 (11%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++ DL   E         LR +  +  N+  +     +      A+       + +  Q
Sbjct: 102 VNKGDLL-VEFDSAVEEATLRASQAQLPNVKANYERYRNLIASNSAS-----KAEFDNAQ 155

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
             +   ++ +  L+ +  ++ + +P  G            Y      +++ V       +
Sbjct: 156 SAYNQLLANIESLKASIARRKVYAPFNGLAGIVNVN-VGQYITTGTQIVR-VEDQSSMKV 213

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           R  +    ++ +  G   T               A I  IDP +      +         
Sbjct: 214 RFTLPQTDVEKIVVGQKVTAVVDALPGQTFP---ASIVAIDPAVDHTTGLINV------- 263

Query: 391 LKITDLAFSDNNIELRNGF 409
               +   ++N  +L +G 
Sbjct: 264 ----EAVITENQNKLLSGM 278


>gi|295664879|ref|XP_002792991.1| kelch-domain-containing protein [Paracoccidioides brasiliensis Pb01]
 gi|226278512|gb|EEH34078.1| kelch-domain-containing protein [Paracoccidioides brasiliensis Pb01]
          Length = 1471

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 83/233 (35%), Gaps = 22/233 (9%)

Query: 84   LLTFEDIETTDLIDLKKVSIKN-------LRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            L   +  E +  +D  +  +++       LR  +    +  + +  + +   +  E  E 
Sbjct: 878  LALIDKNELSQNVDDLRSRLESHGTDVVSLREAVTASAARAELMERQLEEEREHREGLER 937

Query: 137  QLLDFLGKYHSTCSKVFNYGI-----SSVYRSLKMKLTRMRSIYLNRLDLENK------- 184
            +LL    ++    +++ N          +  +   +    RS +L  LD  +        
Sbjct: 938  KLLQLRAEHEEQTTELENAARRLKDAEELAETHAREAESHRSAFLAGLDRASSHHSDTGS 997

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
             SL    + + ++ +     L + N  + N+ +++ R   +    L +   +       +
Sbjct: 998  KSLSDQRVEALKEQVDRANELVKTNRQAANEASEKLRRAEERIAGLEQYQEQASREGLQL 1057

Query: 245  NELYDEANLE---FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
                  A  E    +N  +E+   LE +QR  +    +   L++   ++ I +
Sbjct: 1058 RRQLQSALKESQALSNENREVKAQLESHQRDTSALAIQHGALKELLGERGISA 1110



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 67/208 (32%), Gaps = 14/208 (6%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
             D  +  L D +  ++K          + L   N +          R E+ +  L +Y  
Sbjct: 993  SDTGSKSLSDQRVEALKEQVDRA----NELVKTNRQAANEASEKLRRAEERIAGLEQYQE 1048

Query: 148  TCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
              S+        + R L+  L   +++     +++ +    +   S+       +K L  
Sbjct: 1049 QASR----EGLQLRRQLQSALKESQALSNENREVKAQLESHQRDTSALAIQHGALKELLG 1104

Query: 208  KNAVS----QNDLNQQ--ERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +  +S    ++ L      R        LRE   + +  L+   E+            + 
Sbjct: 1105 ERGISADNRRSPLLDSPGSRFGTPEHARLRELEQQLQASLKAHEEMKLSFESREQEADRA 1164

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQ 289
                LEQ +  +   +  +   EK  ++
Sbjct: 1165 YHEKLEQLENDYQSAVHYVKGTEKMLKR 1192


>gi|170079535|ref|YP_001736169.1| hypothetical protein SYNPCC7002_E0022 [Synechococcus sp. PCC 7002]
 gi|169887204|gb|ACB00914.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
          Length = 313

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 81/239 (33%), Gaps = 23/239 (9%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           +   +V+ G  +     +   +  +  D + ++K  ++     ++T K            
Sbjct: 70  LDDLKVKEGDTVEINQVIA--DRPQDRDRLLVEKQRLQLAIARLETLKV--------TPP 119

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
           L         +L     + H           +++ ++         +I   +  +E  + 
Sbjct: 120 LAPRAVPMTPELPPVSYETHK----------ANIAQATTKLELAKLAIADQKSLIEEIAQ 169

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
           L   LL +H+K    ++ L      ++ +LN+    +  +  + +   +     +    E
Sbjct: 170 LNEPLLVTHEK--AKLETLKIDQQTAELELNKAIANLKDAQAQRQHQEYLSSLAIAERIE 227

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ-KTILSPIAGTIVYNQ 304
             +   L +   L+E            +D  +K+  +E    Q  T+ SP  GT+   +
Sbjct: 228 RSNANALAYQQQLQEFENQQRIRAYQLSDLNTKMADVENRLTQISTVRSPYPGTVRRIR 286


>gi|148678542|gb|EDL10489.1| centrobin, centrosomal BRCA2 interacting protein, isoform CRA_c
           [Mus musculus]
          Length = 876

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 71/219 (32%), Gaps = 11/219 (5%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           LT             +      R    +E   L+ L        +A+  +E QL + L  
Sbjct: 300 LTLRLEVEQQQCRTLQEERDEARAGQLSEHRKLEALQVALQEERQAWIKQEHQLKERLQA 359

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLD---LENKSSLLRALLSSHQKDLTM 201
                         +  R  +      +   L + +   LE     +R    + Q ++++
Sbjct: 360 LQEEGQAQLEREKGNSQREAQAAWETQQQFALLQTEVRRLEGDLDTVRRERDALQLEMSL 419

Query: 202 MKNLFEKNAVS-------QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
           ++  +E   +        Q +    ER+       LR+    + +  + + EL  +   E
Sbjct: 420 VQARYESQRIQMESELAVQLEQRVTERLAEAQENSLRQAASLRDHHRKQLQELSGQHQQE 479

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            A  L +   ++   +     ++++   L   REQ  + 
Sbjct: 480 LAAQLAQFKVEMAD-REERQQQVAQDYELRLAREQARVR 517


>gi|17561652|ref|NP_505094.1| MYOsin heavy chain structural genes family member (myo-5)
            [Caenorhabditis elegans]
 gi|10864419|gb|AAG24132.1| Hypothetical protein F58G4.1 [Caenorhabditis elegans]
          Length = 1974

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/217 (8%), Positives = 80/217 (36%), Gaps = 5/217 (2%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVSIKNLRC-HIDTEKSALDFLNNKYDVLEKAFESREEQ 137
             +       ++++ +  ++ K+          ++ + + +   +++   L +     + +
Sbjct: 1230 EKNDKQREVDELQQSADVEAKQRQNCERMAKQLEAQLTDMTLKSDEQARLIQELTMGKNK 1289

Query: 138  LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
            + +   +  +   +     + ++ R  + + +++  +         +   L + +S++Q 
Sbjct: 1290 VHN-ENQDLNRQLEDAEAQLCALNRIKQQQHSQLEELKRTLDQETRERQSLHSQVSNYQL 1348

Query: 198  DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
            +    +   E+   ++ D+   +R + K+  E+++   + +       E  +E   +  +
Sbjct: 1349 ECEQFRESLEEEQDAKTDV---QRQLSKANSEIQQWRAKFEGEGVSRAEELEETRRKLTH 1405

Query: 258  YLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
             ++E+   LE   +           L    E   + +
Sbjct: 1406 KVQEMQEQLENANQKIGTLEKNKQRLAHDLEDAQVDA 1442



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 68/212 (32%), Gaps = 8/212 (3%)

Query: 74   NGSQILQGTPL------LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
             G  + +   L      LT +  E  + ++     I  L  +       L+      D  
Sbjct: 1386 EGEGVSRAEELEETRRKLTHKVQEMQEQLENANQKIGTLEKNKQRLAHDLEDAQVDADRA 1445

Query: 128  EKAFESREEQLLDFLGKYHSTCS--KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
                 S E++   F           +     +    R  +   T    +     +   ++
Sbjct: 1446 NSIASSLEKKQKGFDKVLDEWRRKCEALVAEVEQSQRETRAAATETFRLRNQLEESGEQT 1505

Query: 186  SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              ++    +  ++L  + +   +   S +DL +  R +     EL++ + E +  L    
Sbjct: 1506 EAVKRENKALAQELKDIADQLGEGGKSVHDLQKMRRRLEIEKEELQQALDEAECALEAEE 1565

Query: 246  ELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
                 A +E +    EI + L++ +  F +  
Sbjct: 1566 AKVMRAQIEVSQIRSEIEKRLQEKEEEFENTR 1597



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 67/202 (33%), Gaps = 6/202 (2%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E     + K+  ++     ++ EK AL     +        E R  +LL          +
Sbjct: 871  EEKTQEERKRKDMEAENARLEAEKQALLIQLEQERDSSAEGEERSAKLLAQKADLEKQMA 930

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM----MKNLF 206
             + N  +            + + I  +   L+   S L   +   + +       +++L 
Sbjct: 931  NM-NDQLCDEEEKNAALTKQKKKIEQDNEGLKKTVSDLETTIKKQESEKQAKDHQIRSLQ 989

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            ++   SQ+++  +     K   E+   + E            ++   +  + L E+   L
Sbjct: 990  DE-IQSQDEVISKLNKEKKHQEEVNRKLLEDIQAEEDKVNHLNKTKAKLESTLDELEDTL 1048

Query: 267  EQNQRTFADEMSKLTILEKTRE 288
            E+ +R   D   +   +E   +
Sbjct: 1049 EREKRGRQDCEKQRRKVEGELK 1070



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 81/233 (34%), Gaps = 29/233 (12%)

Query: 86   TFEDIET-----TDLIDLKKVSIKNLRCHIDTEKSALD-----------FLNNKYDVLEK 129
              ED ++        I      I+ L   +D E+++              L    D L++
Sbjct: 1103 RLEDEQSLVAKLQRQIKELLARIQELEEELDAERNSRSKAEKARNEMQMELEELGDRLDE 1162

Query: 130  AFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR 189
            A  + + Q+ +   K  +  +K+      +   S        +       +L ++   ++
Sbjct: 1163 AGGATQAQI-ELNKKREAELAKLRQDLEDAAINSETSMAALRKKHNDAVAELSDQLDTIQ 1221

Query: 190  ALLSSHQKDLTMMK----NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
             +    +++    +     L +   V        ER+  +   +L +   +     R I 
Sbjct: 1222 KMRGKLEREKNDKQREVDELQQSADVEAKQRQNCERMAKQLEAQLTDMTLKSDEQARLIQ 1281

Query: 246  ELYDEANLEFANYLKEISRDLEQNQRTF-------ADEMSKLTILEKTREQKT 291
            EL      +  N  ++++R LE  +            + S+L  L++T +Q+T
Sbjct: 1282 ELTM-GKNKVHNENQDLNRQLEDAEAQLCALNRIKQQQHSQLEELKRTLDQET 1333



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/200 (11%), Positives = 73/200 (36%), Gaps = 6/200 (3%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL--LDFLGKYHST 148
            +     +  K ++ +L   I  ++S     +++   L+   +S++E +  L+   K+   
Sbjct: 952  KIEQDNEGLKKTVSDLETTIKKQESEKQAKDHQIRSLQDEIQSQDEVISKLNKEKKHQEE 1011

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             ++     I +    +         +     +LE+     +      +K    ++   + 
Sbjct: 1012 VNRKLLEDIQAEEDKVNHLNKTKAKLESTLDELEDTLEREKRGRQDCEKQRRKVEGELK- 1070

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
              ++Q  + +  R  ++    +++   E  ++   + E       +    +KE+   +++
Sbjct: 1071 --IAQELIEELNRHKHEQEQVIKKKDIELSSIQSRL-EDEQSLVAKLQRQIKELLARIQE 1127

Query: 269  NQRTFADEMSKLTILEKTRE 288
             +     E +  +  EK R 
Sbjct: 1128 LEEELDAERNSRSKAEKARN 1147


>gi|53713659|ref|YP_099651.1| ABC transporter permease [Bacteroides fragilis YCH46]
 gi|60681932|ref|YP_212076.1| hypothetical protein BF2452 [Bacteroides fragilis NCTC 9343]
 gi|253565592|ref|ZP_04843047.1| ABC transporter permease [Bacteroides sp. 3_2_5]
 gi|52216524|dbj|BAD49117.1| probable ABC transporter permease [Bacteroides fragilis YCH46]
 gi|60493366|emb|CAH08152.1| putative membrane protein [Bacteroides fragilis NCTC 9343]
 gi|251945871|gb|EES86278.1| ABC transporter permease [Bacteroides sp. 3_2_5]
          Length = 416

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 104/314 (33%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE-EQLLDFLGKYHSTCSK 151
           ++ I + +V       ++D E      L  K +  E     R   +    L K  +  + 
Sbjct: 45  SENIQIAEVKDDKFMEYVDVEGLIQPILTIKVNTREAGSVERIIAEEGSLLQKGDTILTL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + S+         +  +     +++E KS  L+        +L  +K        
Sbjct: 105 SNPDLLRSIEDQRDDWEKQRITYQEKEIEMEQKSLSLKQQTLETNYELARLK-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        + +  + E +   +  N       L   + +  I +DL   + 
Sbjct: 157 -KSFTLDKEEFRMGIKSKAQLEVSEDEYNYKVKNAELQREGLRHDSAVTIIRKDL--IRT 213

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  K     +      + +PI+G + + +  +       S+ + +I        I 
Sbjct: 214 DMERERKKYERATERLGNLVVKAPISGQLSFVKV-TPGQQVGSSESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPI-ISQQDNNLQTQE 385
             ++   I  +  G  ATV +    Y     K    + ++   +D +   +  +N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATVNYQGKKYPLRITKVVPEVKDRMFDVDLVFTGEMPDNVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEQA 345


>gi|23097644|ref|NP_691110.1| hypothetical protein OB0189 [Oceanobacillus iheyensis HTE831]
 gi|22775867|dbj|BAC12145.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 412

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 79/224 (35%), Gaps = 16/224 (7%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFE---DIETTDLIDLKKVSI 103
            G I           P SG+ ++F V+ G  +  G PL ++E     ET   ++     +
Sbjct: 56  PGVIDVAGEEHVYFDPSSGVFQEFMVQEGDVVSSGDPLFSYEVQSSYETEVNLNQHVSQV 115

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVY 161
           +     I +  + ++             +    EE+L     +       +    +    
Sbjct: 116 EGEIAAIQSAITEMEMFQIPEGATGTPSDVTINEEELEISFPQNTVEAELLREQYLIEKE 175

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-------N 214
             L  K   ++S+    ++L++  +++        +   +  +L +     Q        
Sbjct: 176 NELSQKTAELQSLEAQLMELQSFENVITVNSPFDGRISEVKDSLEDPVITIQDTTLQVDG 235

Query: 215 DLNQQERIVYKSTLELRENIHE----QKNMLRHINELYDEANLE 254
           +L ++ER   ++ L  +  I+E     +  +  ++E   E  LE
Sbjct: 236 ELTEEERTKVEAGLATQMEINELPIALEGTISEVSEHPKEVELE 279



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 79/250 (31%), Gaps = 31/250 (12%)

Query: 170 RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            ++S Y   ++L    S +   +++ Q             A+++ ++ Q       +  +
Sbjct: 97  EVQSSYETEVNLNQHVSQVEGEIAAIQS------------AITEMEMFQIPEGATGTPSD 144

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           +  N  E +           EA L    YL E   +L Q         ++L  L+     
Sbjct: 145 VTINEEELEISFPQ---NTVEAELLREQYLIEKENELSQKTAELQSLEAQLMELQSFENV 201

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
            T+ SP  G I   +            P++ I        +  ++T ++   V+ G    
Sbjct: 202 ITVNSPFDGRISEVKDSLE-------DPVITI--QDTTLQVDGELTEEERTKVEAGLATQ 252

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           +             +  I ++     + +    +   + V +   D    D    L  G+
Sbjct: 253 MEINELP----IALEGTISEVSEHPKEVELESTSVYPFSVSIAEEDPEVLDA---LLPGY 305

Query: 410 PAEVLFTAKN 419
             E+    + 
Sbjct: 306 HTEIGIVMEE 315


>gi|330013686|ref|ZP_08307765.1| auxiliary transport protein, membrane fusion protein family protein
           [Klebsiella sp. MS 92-3]
 gi|328533382|gb|EGF60123.1| auxiliary transport protein, membrane fusion protein family protein
           [Klebsiella sp. MS 92-3]
          Length = 323

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 49/154 (31%), Gaps = 2/154 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I    V+ G  + QG  L   +     +        IK     +   ++ LD   ++ 
Sbjct: 24  GRIDTILVKEGQFVHQGEVLARMDTRVLNEQRLEAAAQIKEAESAVLAARALLDQRQSEM 83

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E   + R+ +L     ++    S   +   +   + L        S        + +
Sbjct: 84  RASEAVVKQRQAELDSTAKRH--VRSNTLSQRGAVSAQQLDDDRAAAESARAALESAKAQ 141

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            S  RA + + +  +   +   E +  ++  +  
Sbjct: 142 VSAARAAIEAARTSIIQAQTRVEASQATERRILA 175


>gi|315618147|gb|EFU98738.1| efflux transporter, RND family, MFP subunit [Escherichia coli 3431]
          Length = 415

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 50/153 (32%), Gaps = 10/153 (6%)

Query: 35  SILLPIEISVS----SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI 90
           +    +E +V       G I    N V ++S   G +     + G Q+  G  L   +  
Sbjct: 64  AATA-VEQAVPRYLTGLGTITAA-NTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPS 121

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +    +   +  +   +  +   +  L     +Y  L K      ++L         T  
Sbjct: 122 QFKVALAQAQGQLAKDKATLANARRDL----ARYQQLAKTNLVSRQELDAQQALVSETEG 177

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            +     S     L++  +R+ S    R+ L+ 
Sbjct: 178 TIKADEASVASAQLQLDWSRITSPVDGRVGLKQ 210



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 64/201 (31%), Gaps = 13/201 (6%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD--LE 267
            +++ D +Q +  + ++  +L ++     N  R +      A     +  +  ++   + 
Sbjct: 114 LLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVS 173

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQP--LMKIVPHS 325
           + + T   + + +   +   +   I SP+ G +   +     N         ++ I   +
Sbjct: 174 ETEGTIKADEASVASAQLQLDWSRITSPVDGRV-GLKQVDVGNQISSGDTTGIVVIT-QT 231

Query: 326 KLTYIRAKVTPKQIQHVKKGYTA--TVRFPHYADIREKKF-KAIIEKIDPIISQQDNNLQ 382
               +   +    I  V +   A   +    +     KK  +  +  +D  I      ++
Sbjct: 232 HPIDLLFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATTGTIK 291

Query: 383 TQEYYEVILKITDLAFSDNNI 403
                +      D A   N  
Sbjct: 292 V----KARFNNQDDALFPNQF 308



 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 35/73 (47%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
              +     + + +  +A L++ ++DL   + L + N VS+ +L+ Q+ +V ++   ++ 
Sbjct: 122 QFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKA 181

Query: 233 NIHEQKNMLRHIN 245
           +     +    ++
Sbjct: 182 DEASVASAQLQLD 194


>gi|301753032|ref|XP_002912412.1| PREDICTED: LOW QUALITY PROTEIN: myosin-XVIIIa-like, partial
            [Ailuropoda melanoleuca]
          Length = 2066

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 67/214 (31%), Gaps = 25/214 (11%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            ++      L  +D      I   K +++     +  EK+           ++   E  +E
Sbjct: 1722 EVEIEDLHLQIDD------IAKAKTALEEQLSRLQREKNE----------VQSRLEEDQE 1765

Query: 137  QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
             + + + K+ +  ++            +     ++      + +L+ K   L++ +   +
Sbjct: 1766 DMNELMKKHKAAVAQASRD-----LAQMNDLQAQLEEANKQKQELQEKLQALQSQVEFLE 1820

Query: 197  KDLTMMKNLFEKNAVSQNDL---NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
            + +   K+L  +      +L    + ER   K    L   + E    L    +    A  
Sbjct: 1821 QSMVD-KSLVSRQEAKIRELETRLEFERTQVKRLESLAGRLKENMEKLTEERDQRTAAEN 1879

Query: 254  EFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
                  K + R L   +    +   K     + +
Sbjct: 1880 REKEQNKRLQRQLRDTKEEMGELARKEAEASRKK 1913



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 74/219 (33%), Gaps = 21/219 (9%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             ++ +    L   +      I      + + R   ++    LD    +    EK  E  +
Sbjct: 1283 EKVEKERNELRLNNDRLETRISELTSELTDERNTGESTSQLLDTETAERLRAEKEMEELQ 1342

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RLDLENKSSLLRALLSS 194
             Q      +      +V    +             +R+  +N  +D ++     R     
Sbjct: 1343 TQYDALKKQMEVMEMEVMEARL-------------IRAAEINGEVDDDDTGGEWRLKYER 1389

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
              +++   K   ++    + ++ QQ +R + +   +L+ +  E +  L+ + +       
Sbjct: 1390 AMREVDFTKKRLQQEFEDKLEVEQQNKRQLERRLGDLQADSDESQRALQQLKKKSQRLTA 1449

Query: 254  EFANY------LKEISRDLEQNQRTFADEMSKLTILEKT 286
            E  +        +  + +LE+ QR F  E+S+     + 
Sbjct: 1450 ELQDTKLHLEGQQVCNHELEKKQRRFDSELSQAHEEAQR 1488


>gi|294146582|ref|YP_003559248.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
 gi|292676999|dbj|BAI98516.1| HlyD-family secretion protein [Sphingobium japonicum UT26S]
          Length = 416

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/192 (12%), Positives = 61/192 (31%), Gaps = 10/192 (5%)

Query: 38  LPIEISVSS----SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETT 93
            P+  +V+      G        VEI+   SG +      +G  +  G  L T +     
Sbjct: 62  APLSRAVTQWDDYVGRFAPS-QTVEIRPRVSGSVTAIHFRDGDYVKAGQLLFTIDQRPFL 120

Query: 94  DLIDLKKVSIKNLRCHIDTEKS---ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
             +   + S  + R  +   ++    +  L     V     +S   +L           +
Sbjct: 121 AALAEARASTASARSALLLAQNDYGRVQRLTGDEAVSASEVDSLRSRLQAAQAALAGAQA 180

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           +     +   +  ++  ++    +   R+D+ N  S      ++    +  +  ++    
Sbjct: 181 RERQRALEVEFTQVRAPISGR--VSDRRVDIGNLVSAGEGAGATLLTTVNKIDPIYFNFD 238

Query: 211 VSQNDLNQQERI 222
            S+    + +R 
Sbjct: 239 ASEALYLKSQRD 250


>gi|262404898|ref|ZP_06081452.1| probable RND efflux membrane fusion protein [Vibrio sp. RC586]
 gi|262348982|gb|EEY98121.1| probable RND efflux membrane fusion protein [Vibrio sp. RC586]
          Length = 361

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 20/150 (13%)

Query: 268 QNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKL 327
           + +  +    + +  L+ T  ++ I +P AG I     F    Y Q       IV     
Sbjct: 135 EAEANYYALAADIESLKATIARREIKAPFAGVIGIRNVF-LGQYLQPGT---DIVRLEDT 190

Query: 328 TYIRAK--VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
           + +R +  V    I  +       +    Y       FK  I  I+P +S Q   +Q Q 
Sbjct: 191 SVMRLRFTVPQTDISRISLNQEVDIFVDAYPQT---SFKGSISAIEPAVSVQSGLIQVQ- 246

Query: 386 YYEVILKITDLAFSDNNIELRNGFPAEVLF 415
                         +++ +LR+G  A    
Sbjct: 247 ----------ANIPNSDGKLRSGMFARANI 266



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 39/113 (34%), Gaps = 4/113 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G+I +   E+G+Q+ +  PL+  +       +   +  +   +   +  K     L  K 
Sbjct: 71  GVIDQITFESGTQVAKDQPLVLLDSAVEKANLKSSEARLPAAKAKYERYKG----LFTKG 126

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
            + +++++  E           S  + +    I + +  +          YL 
Sbjct: 127 SISKESYDEAEANYYALAADIESLKATIARREIKAPFAGVIGIRNVFLGQYLQ 179


>gi|254444087|ref|ZP_05057563.1| auxiliary transport protein, MFP family, putative [Verrucomicrobiae
           bacterium DG1235]
 gi|198258395|gb|EDY82703.1| auxiliary transport protein, MFP family, putative [Verrucomicrobiae
           bacterium DG1235]
          Length = 368

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 69/195 (35%), Gaps = 20/195 (10%)

Query: 219 QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR----DLEQNQRTFA 274
           QE       ++L ++  + +           E NL+ +  L +       + ++ + T A
Sbjct: 85  QEVQQGDLLIKLDDSTEQAQLRAAEATAQLAEVNLKRSRDLLQSRTISQSEFDRAEATAA 144

Query: 275 DEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKV 334
              ++L  ++   ++K I +P +GT +  +      Y      +  +       Y+   +
Sbjct: 145 QSTAQLEQIKAVLDKKQIHAPFSGT-LGIRLVDIGEYLSPGVAIASLQ-QLSPIYVDFNL 202

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
             KQ+    KGY   V    Y D     F+  +E  +P +  +         + V     
Sbjct: 203 PQKQLAAAAKGYPIEVAIDSYPDTI---FRGAVEATNPELDTRTRT------FRVR---- 249

Query: 395 DLAFSDNNIELRNGF 409
                +++  LR G 
Sbjct: 250 -GILPNDDRLLRPGM 263



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 47/143 (32%), Gaps = 1/143 (0%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E +V+++G +     V  + S   G + +   E+G ++ QG  L+  +D      +   +
Sbjct: 51  EQTVNATGSLQASKGV-MVSSEVPGTVAEIYFESGQEVQQGDLLIKLDDSTEQAQLRAAE 109

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
            + +    ++   +  L          ++A  +  +              K  +   S  
Sbjct: 110 ATAQLAEVNLKRSRDLLQSRTISQSEFDRAEATAAQSTAQLEQIKAVLDKKQIHAPFSGT 169

Query: 161 YRSLKMKLTRMRSIYLNRLDLEN 183
                + +    S  +    L+ 
Sbjct: 170 LGIRLVDIGEYLSPGVAIASLQQ 192


>gi|108763190|ref|YP_635260.1| RND family efflux transporter MFP subunit [Myxococcus xanthus DK
           1622]
 gi|108467070|gb|ABF92255.1| efflux transporter, RND family, MFP subunit [Myxococcus xanthus DK
           1622]
          Length = 414

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 91/244 (37%), Gaps = 8/244 (3%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
            P+   V  +G ++ E  +  + +  +G +++  V  G+ +   T LL   + +      
Sbjct: 54  GPMVRQVKGAGTLVPE-YIRWLTADTAGRVERIHVRPGATVTADTLLLELSNPDVQLQAL 112

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +  + ++   +   +  L+      + +  A  +   +        +    +  + G 
Sbjct: 113 EAERQLASVEADLIQVRMELETQRLAQEAMVAALINESAE-AGRRSDANEALHQKAHIGD 171

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL--FEKNAVSQND 215
             + ++ +      R + L R  L+  +S ++  L++ Q  +  +K +  F +  V    
Sbjct: 172 LEMQQAREKAAELSRRLELERKKLQVVASSMKEQLTAQQGQVERLKAVARFRRAQVESMK 231

Query: 216 LNQQE-RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
           +   E  ++    LEL + +     + + +     +A L  A      +RD++   +   
Sbjct: 232 VLAGEDGVLQDLPLELGQWVTPGVLLAKVVKPERLKAELRIAETQ---ARDIQPGLKALV 288

Query: 275 DEMS 278
           D  +
Sbjct: 289 DTRN 292


>gi|292655017|ref|YP_003534914.1| DNA double-strand break repair ATPase Rad50 [Haloferax volcanii
           DS2]
 gi|49036440|sp|P62133|RAD50_HALVO RecName: Full=DNA double-strand break repair rad50 ATPase
 gi|46309119|emb|CAG25775.1| DNA double-strand break repair Rad50 ATPase [Haloferax volcanii]
 gi|291371675|gb|ADE03902.1| DNA double-strand break repair ATPase Rad50 [Haloferax volcanii
           DS2]
          Length = 893

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 67/204 (32%), Gaps = 5/204 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK--YHST 148
           E  + +D  + +I++L   I  +++  D L+ +   L+ A +  E  + D L +      
Sbjct: 248 EKRERLDEIESAIEDLTAKISADETKRDDLSERVRELDAAADELESDIDDALARADLDDA 307

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             +       ++          +          E ++  LR      +      +   E 
Sbjct: 308 SDEAIADAREALSARESELRDDLSEARTRAQAFETQAERLRERADDLESRAEEKREAAEV 367

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEAN---LEFANYLKEISRD 265
           +A +  +  ++     ++  ELR  + + +           EA     E      E    
Sbjct: 368 DAETAAEAERELESFRETRAELRSALDDAEARFEDAPVELGEAADLLEERREARSEARES 427

Query: 266 LEQNQRTFADEMSKLTILEKTREQ 289
           L + +    +   +L   E+ R+ 
Sbjct: 428 LAETETELKNARERLAEAERLRDA 451


>gi|115526641|ref|YP_783552.1| RND family efflux transporter MFP subunit [Rhodopseudomonas
           palustris BisA53]
 gi|115520588|gb|ABJ08572.1| efflux transporter, RND family, MFP subunit [Rhodopseudomonas
           palustris BisA53]
          Length = 456

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 47/141 (33%), Gaps = 4/141 (2%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            ++   L  Q + +      L+   ++ +     I  L +   L     L E    L   
Sbjct: 204 VIADEKLTLQLKALDAQIDALQAQSNQAQTDFTRIEGLVERGTLPRVK-LDEARTALNVA 262

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +       ++  ++++   +  +L+P  G ++     +  +      P+  I        
Sbjct: 263 ENGLRARTAERAVIQQQSTEGQVLAPADGRVLTKLV-AVGSVVLPGDPVATIAQQDFKLR 321

Query: 330 IRAKVTPKQIQHVKKGYTATV 350
           +  +V  +  + +K G    V
Sbjct: 322 L--RVPERHAKFLKAGDKVRV 340



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/137 (10%), Positives = 37/137 (27%), Gaps = 15/137 (10%)

Query: 35  SILLPIEIS--VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIET 92
           ++   +E    V + G I              G I +  V  G  + +G  +    D + 
Sbjct: 164 AVFATVESVSVVPARGRI-------------GGTIIQLGVREGDPVKRGQSIAVIADEKL 210

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
           T  +      I  L+   +  ++    +    +         +E         +   ++ 
Sbjct: 211 TLQLKALDAQIDALQAQSNQAQTDFTRIEGLVERGTLPRVKLDEARTALNVAENGLRART 270

Query: 153 FNYGISSVYRSLKMKLT 169
               +     +    L 
Sbjct: 271 AERAVIQQQSTEGQVLA 287


>gi|254229885|ref|ZP_04923289.1| Membrane-fusion protein [Vibrio sp. Ex25]
 gi|262394581|ref|YP_003286435.1| linker protein putative [Vibrio sp. Ex25]
 gi|151937589|gb|EDN56443.1| Membrane-fusion protein [Vibrio sp. Ex25]
 gi|262338175|gb|ACY51970.1| linker protein putative [Vibrio sp. Ex25]
          Length = 365

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/154 (8%), Positives = 48/154 (31%), Gaps = 2/154 (1%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + +  V+ G ++ +G  + T +  +    +D        +       +  +D      
Sbjct: 67  GEVSRIMVKEGDKVTKGDVIATLDPTDYELDVDNASARFSVVDSQYRRSRPLVDKGLLAK 126

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              ++    R+  L +                +  +   + ++      +  + +++ + 
Sbjct: 127 SQFDEIAAQRQIALAELKLAKLRLSFTALKAPVDGIISRVNIEQFENVQVGQHIVNIHSL 186

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
             +   +L      L + +   E+   +   L +
Sbjct: 187 ERV--EVLIQLPDRLYVNQPPTEERLTAIKALVR 218


>gi|126172727|ref|YP_001048876.1| RND family efflux transporter MFP subunit [Shewanella baltica
           OS155]
 gi|125995932|gb|ABN60007.1| efflux transporter, RND family, MFP subunit [Shewanella baltica
           OS155]
          Length = 440

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 92/287 (32%), Gaps = 14/287 (4%)

Query: 99  KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
           ++ ++  L   +    SA  F +      +    + + +  D  G      ++V    ++
Sbjct: 46  RQFTLSTLALALCVLGSAALFTSQPSWAGDDHGSATQTEQADEHGAQALKLTQV-QQALA 104

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            +        +   +     +       + R   ++    L +   +  ++ V   ++ +
Sbjct: 105 GISLLPLSSDSLNIANLNLDIRATATLVVDRDRTATLAPQLDV--RVLARHVVPGQEVKK 162

Query: 219 QE-------RIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            E         V ++  +      E   + R        +    A    E+ R + +  +
Sbjct: 163 GEPLLTLGGSAVAQAQADYINAAAEWSRVKRMSEGAVSVSRRMQAQVDAELKRAILEAIK 222

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               ++  L    +      +L+PI G +  + +           PLM++       ++ 
Sbjct: 223 MTPAQIRTLESTPEAIGSYQLLAPIDGRVQQDIAM-LGQVFSAGTPLMQLT-DESYLWVE 280

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQD 378
           A++TP Q  H+  G  A V+          K      ++D +   + 
Sbjct: 281 AQLTPTQTAHITVGSAALVQVG--DKTLAGKIIGRSHELDSVTRTEQ 325



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/143 (10%), Positives = 48/143 (33%), Gaps = 2/143 (1%)

Query: 37  LLPIEISVSSSGEILNEDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDIE-TTD 94
           +  + + + ++  ++ + +     +P   + +    V  G ++ +G PLLT         
Sbjct: 118 IANLNLDIRATATLVVDRDRTATLAPQLDVRVLARHVVPGQEVKKGEPLLTLGGSAVAQA 177

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
             D    + +  R    +E +       +  V  +   +  E +     +  +  S    
Sbjct: 178 QADYINAAAEWSRVKRMSEGAVSVSRRMQAQVDAELKRAILEAIKMTPAQIRTLESTPEA 237

Query: 155 YGISSVYRSLKMKLTRMRSIYLN 177
            G   +   +  ++ +  ++   
Sbjct: 238 IGSYQLLAPIDGRVQQDIAMLGQ 260


>gi|46143716|ref|ZP_00134562.2| COG0845: Membrane-fusion protein [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208068|ref|YP_001053293.1| putative RND efflux membrane fusion protein [Actinobacillus
           pleuropneumoniae L20]
 gi|303251547|ref|ZP_07337721.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307252140|ref|ZP_07534039.1| hypothetical protein appser6_6580 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|126096860|gb|ABN73688.1| putative RND efflux membrane fusion protein [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|302649545|gb|EFL79727.1| membrane-fusion protein [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306860440|gb|EFM92454.1| hypothetical protein appser6_6580 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 401

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 50/124 (40%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + K  V +G ++ +G  L+ F+       +   +  + N++ + +  ++ +   +  
Sbjct: 88  SGTVTKVHVRSGQRVNKGDLLVEFDSAVEEATLRASQAQLPNVKANYERYRNLIASNSAS 147

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
               + A  +  + L +      S   +      + +   + + + +  +     + +E+
Sbjct: 148 KAEFDNAQSAYNQLLANIESLKASIARRKVYAPFNGLAGIVNVNVGQYITTGTQIVRVED 207

Query: 184 KSSL 187
           +SS+
Sbjct: 208 QSSM 211



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 60/199 (30%), Gaps = 22/199 (11%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           V++ DL   E         LR +  +  N+  +     +      A+       + +  Q
Sbjct: 102 VNKGDLL-VEFDSAVEEATLRASQAQLPNVKANYERYRNLIASNSAS-----KAEFDNAQ 155

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
             +   ++ +  L+ +  ++ + +P  G            Y      +++ V       +
Sbjct: 156 SAYNQLLANIESLKASIARRKVYAPFNGLAGIVNVN-VGQYITTGTQIVR-VEDQSSMKV 213

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
           R  +    ++ +  G   T               A I  IDP +      +         
Sbjct: 214 RFTLPQTDVEKIVVGQKVTAVVDALPGQTFP---ASIVAIDPAVDHTTGLINV------- 263

Query: 391 LKITDLAFSDNNIELRNGF 409
               +   ++N  +L +G 
Sbjct: 264 ----EAVITENQNKLLSGM 278


>gi|330815398|ref|YP_004359103.1| Probable RND efflux membrane-fusion protein precursor [Burkholderia
           gladioli BSR3]
 gi|327367791|gb|AEA59147.1| Probable RND efflux membrane-fusion protein precursor [Burkholderia
           gladioli BSR3]
          Length = 379

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 61/212 (28%), Gaps = 17/212 (8%)

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
           +    + + Q E +V       R  +   +            +    A    E     +Q
Sbjct: 83  HFTPGSQVRQGEPLVQLYDDPERAQLASLQARAVFAKSQLARSRT-LAPVGAEPRSVFDQ 141

Query: 269 NQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLT 328
           +Q  +    +    +E    QK + +P AG I   +  +   Y    + +  +       
Sbjct: 142 HQFDYQSASADARQVEAVIRQKLVRAPFAGEI-GIRQVNLGQYLNAGEAIATLT-DLDTL 199

Query: 329 YIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYE 388
           Y    +  K +  ++ G    +    Y D     F   +  I+P +     N+  Q    
Sbjct: 200 YANFTLPQKYLGQLRAGQAVHLAADAYPDR---DFVGKVTAIEPRVGDATRNVTVQ---- 252

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                      +    LR G  A V     + 
Sbjct: 253 -------ATLDNRGHPLRPGMYAHVTLELPSR 277



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 45/149 (30%), Gaps = 2/149 (1%)

Query: 56  VVEIKSPF-SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
              + +P  +G +       GSQ+ QG PL+   D      +   +      +  +   +
Sbjct: 67  RQVMLAPEVAGRVTAIHFTPGSQVRQGEPLVQLYDDPERAQLASLQARAVFAKSQLARSR 126

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
           +          V ++     +    D          K+     +      ++ L +  + 
Sbjct: 127 TLAPVGAEPRSVFDQHQFDYQSASADARQVEAVIRQKLVRAPFAGEIGIRQVNLGQYLNA 186

Query: 175 YLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                 L +    L A  +  QK L  ++
Sbjct: 187 GEAIATLTD-LDTLYANFTLPQKYLGQLR 214


>gi|297470826|ref|XP_002684783.1| PREDICTED: KIAA1000 protein-like [Bos taurus]
 gi|296491471|gb|DAA33524.1| KIAA1000 protein-like [Bos taurus]
          Length = 2004

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 65/224 (29%), Gaps = 25/224 (11%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +D                LR     E   +   N +   LE+A    + +L D L     
Sbjct: 1371 DDTIQRAEDLEDAKKKLALRLQEAAEAMGVA--NARNASLERARLRLQLELGDTLSDLGQ 1428

Query: 148  TCSKVFNYGISSV----------------YRSLKMKLTRMRSIYLNRLDLEN-------K 184
              S                             L       R++ +  L+L +        
Sbjct: 1429 ARSAAAALNQKQQHFDKSLDDWRRKHEESQAMLDAAKKEARALSIQLLELRHSYEEGTMS 1488

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               LR      +++++ + N   +   + + + + ++ + +   E++  + E +  L   
Sbjct: 1489 QEALRRENKHLKEEISNLTNQVREGKKNLSKMEKVKKQIEQEKNEVQMALEEAEGALERN 1548

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                    LE ++   E+ R L +      +   K      + +
Sbjct: 1549 ESKVLRLQLELSDTKAELERKLSEKDEEIENFRKKQQCAIDSLQ 1592



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 9/204 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +D+ET      K+     L+     E   ++ LN     L +A  + +E     L   
Sbjct: 947  EIDDLETLLAKSQKEKHATELKVKNLLE--EVESLNEDVSKLHRAARAAQETHQQTLEDL 1004

Query: 146  HSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             +   KV   +    ++ + +      +      R++ E +   +   L  +Q+ +  ++
Sbjct: 1005 RNEEEKVHTLSKAKLTLEQRVNELEGALEQESKARMNCEKEKCKVEGELKLNQESMDDLE 1064

Query: 204  ----NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                 L EK    + ++NQ    V      + +     K     I  L +E   E     
Sbjct: 1065 SRQLQLAEKLRRKELEMNQMRSKVENEKSLVAQLQKTVKEFQTQIQLLKEELEAERTTRA 1124

Query: 260  KEISRDLEQNQRTFADEMSKLTIL 283
            K + R+     R   D   +L   
Sbjct: 1125 K-VERERANLIRELEDMNERLEEA 1147



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 80/219 (36%), Gaps = 21/219 (9%)

Query: 79   LQGTPLLTFE-DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
             +   LL  + + ET   ++ +   +   +  ++    AL     + + +     +R ++
Sbjct: 877  EKNDLLLQLQAERETLANVEEQCELLIKSKIQLEASVKALSARVEEEEEINSKLTARGQK 936

Query: 138  LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL----RALLS 193
            L D   +            ++   +       +++++      L    S L    RA   
Sbjct: 937  LEDECSELKKEIDD-LETLLAKSQKEKHATELKVKNLLEEVESLNEDVSKLHRAARAAQE 995

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
            +HQ+ L  ++N  EK              + K+ L L + ++E +  L    E   +A +
Sbjct: 996  THQQTLEDLRNEEEKVH-----------TLSKAKLTLEQRVNELEGAL----EQESKARM 1040

Query: 254  EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                   ++  +L+ NQ +  D  S+   L +   +K +
Sbjct: 1041 NCEKEKCKVEGELKLNQESMDDLESRQLQLAEKLRRKEL 1079



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 71/198 (35%), Gaps = 15/198 (7%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            + T      +     LR  ++  ++ ++ L+ +  +     +  + QL +          
Sbjct: 1266 DVTAQKTKLRSENGELRKRLEEMEALINQLSREKSIFTLQIQDLKGQLAEETKS------ 1319

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  ++   +S K     +R  Y    +   K+ LL+ALL  +  ++   +  +E + 
Sbjct: 1320 ---QSALAQAVKSAKRDCDLLREQYEE--EQAAKAELLQALLKGNA-EMVKWRTKYEDDT 1373

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            + + +    E    K  L L+E   E   +    N   + A L     L +   DL Q +
Sbjct: 1374 IQRAE--DLEDAKKKLALRLQEA-AEAMGVANARNASLERARLRLQLELGDTLSDLGQAR 1430

Query: 271  RTFADEMSKLTILEKTRE 288
               A    K    +K+ +
Sbjct: 1431 SAAAALNQKQQHFDKSLD 1448



 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 18/185 (9%), Positives = 57/185 (30%), Gaps = 4/185 (2%)

Query: 110  IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
              TE + +     K        E   + +   +              I    + ++   +
Sbjct: 1752 AATEVANMSEALKKEQDTNAHLERMRKNMEQTIKDLQERLDDAEQTAIVGNRKQIQKLES 1811

Query: 170  RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            R+R +     +LE++            +    +K L  +    + ++++ + ++    L+
Sbjct: 1812 RVRELE---AELESEVQRNSEAQRGAHRLERCLKELTHQVEEDKKNMSRMQTLMDNLQLK 1868

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            ++    + ++     ++   +   +  + L E     E  +        K     K   Q
Sbjct: 1869 VQSYKQQIESAEAEASQYRSKYK-KQQHELNEAKERAEIAESQVNKLKMKAKEFGKKVRQ 1927

Query: 290  KTILS 294
              + +
Sbjct: 1928 VNVQA 1932


>gi|307548894|ref|NP_001182585.1| myosin-3 [Oryctolagus cuniculus]
          Length = 1940

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 84/229 (36%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S   L+  ID   S+++ ++     LEK   + E+QL +  GK 
Sbjct: 1207 QIDNLQRVKQKLEKEKS--ELKMEIDDLASSVESVSKSKANLEKICRTLEDQLSESRGKN 1264

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
              T   +                + R L+ K + +  +  ++     +   L+  L    
Sbjct: 1265 EETQRNLSELTTQKSRLQTEAGELSRQLEEKESIVSQLSRSKQAFTQQVEELKRQLEEES 1324

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K  + + +  + +    + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1325 KAKSALAHALQSSRHDCDLLREQYEEEQEAKAELQRALSKANSEVAQWRTKYETDAIQRT 1384

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
              L+E  + L Q  +   +++  +     + E+      + G +     
Sbjct: 1385 EELEEAKKKLAQRLQDSEEQVEAVNAKCASLEKTKQR--LQGEVEDLMV 1431



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 82/216 (37%), Gaps = 10/216 (4%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
               L  +D         +++++   R ++   ++ ++ L    +  E+A +  E++LLD 
Sbjct: 1653 DTQLHLDDALRGQEDLKEQLALVERRANL--LQAEVEELRATLEQTERARKLAEQELLDA 1710

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                 +   ++ +   +S+  + K   T +  +     D    +            D  M
Sbjct: 1711 -----NERVQLLHTQNTSLIHTKKKLETDLTQLQSEVEDASRDARNAEEKAKKAITDAAM 1765

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            M    +K   +   L + ++ + ++  +L+  + E + +         +   +    ++E
Sbjct: 1766 MAEELKKEQDTSAHLERMKKNMEQTVKDLQHRLDEAEQLALK---GGKKQIQKLETRIRE 1822

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +  +LE  Q+  A+ +  L   E+  ++ T  S   
Sbjct: 1823 LEFELEGEQKKNAESVKGLRKYERRVKELTYQSEED 1858



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 71/203 (34%), Gaps = 14/203 (6%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHID---TEKSALDFLNNKYDVLEKAFESREEQLLDF 141
            L  +  +    ++      +N         T+ + +     K        E  ++ +   
Sbjct: 1731 LETDLTQLQSEVEDASRDARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQT 1790

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
            +        +     +    + ++   TR+R +     +LE +       +   +K    
Sbjct: 1791 VKDLQHRLDEAEQLALKGGKKQIQKLETRIRELEF---ELEGEQKKNAESVKGLRKYERR 1847

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +K L  ++   + ++ + + +V K  +++       K+  R   E  ++AN+  + + K 
Sbjct: 1848 VKELTYQSEEDRKNVLRLQDLVDKLQVKV-------KSYKRQAEEADEQANVHLSKFRK- 1899

Query: 262  ISRDLEQNQRTFADEMSKLTILE 284
               +LE+ +       S++  L 
Sbjct: 1900 AQHELEEAEERADIAESQVNKLR 1922



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 72/222 (32%), Gaps = 15/222 (6%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             G   L    ++  E+ +      LKK   +  +     E      L  +  + E     
Sbjct: 1057 EGDLKLAQESIVDLENDKQQLDERLKKKDFEYCQLQSKVEDEQSLGLQFQKKIKELQARI 1116

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             E +      +     ++      +     L  +L     +   +++L  K         
Sbjct: 1117 EELEEEIEAERATRAKTEKQRSDFARELEELSERLEEAGGVTSTQIELNKKREA------ 1170

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               + L + ++L E     +  +    +    S  EL E I   + + + + +   E  +
Sbjct: 1171 ---EFLKLRRDLEEATLQHEATVATLRKKHADSAAELGEQIDNLQRVKQKLEKEKSELKM 1227

Query: 254  EFAN------YLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            E  +       + +   +LE+  RT  D++S+     +  ++
Sbjct: 1228 EIDDLASSVESVSKSKANLEKICRTLEDQLSESRGKNEETQR 1269


>gi|289670701|ref|ZP_06491776.1| membrane fusion protein [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 307

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 72/217 (33%), Gaps = 19/217 (8%)

Query: 210 AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            V +            +  E +  + + +  +     L D    E A   +    ++++ 
Sbjct: 77  VVDRARYAIALEQARAALAERQATLTQLRREIARDRSLQDLVAAEDAEVRR---SNVQKA 133

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           Q   A   S + + +   ++  + SP  G +   ++    +Y    +P++ ++  +    
Sbjct: 134 QAAVATAQSAVDLAQLNLDRTQVRSPADGHVSD-RTVRVGDYVTAGRPVVAVL-DTGSFR 191

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQD 378
           +       ++Q V  G    V+            ++I   I+           P ++   
Sbjct: 192 VDGYFEETRLQGVHPGQRVDVQLMGEPVTLHGHVQSIAAGIEDRYRSGSAGALPNVTPAF 251

Query: 379 NNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
           + ++  +   V + +  +     ++ L  G  A V  
Sbjct: 252 DWVRLAQRIPVRIALNQV---PAHVHLIAGRTATVSI 285



 Score = 40.0 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 10/96 (10%), Positives = 33/96 (34%), Gaps = 1/96 (1%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG+++   V +   + +G  L   +       ++  + ++   +  +   +  +    + 
Sbjct: 55  SGLVESVAVADNQPVTRGQLLFVVDRARYAIALEQARAALAERQATLTQLRREIARDRSL 114

Query: 124 YDVLEKA-FESREEQLLDFLGKYHSTCSKVFNYGIS 158
            D++     E R   +        +  S V    ++
Sbjct: 115 QDLVAAEDAEVRRSNVQKAQAAVATAQSAVDLAQLN 150


>gi|221044188|dbj|BAH13771.1| unnamed protein product [Homo sapiens]
          Length = 1104

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 24/226 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L +  K   + +R  +      +  L  +     +   +  EQ +    K  S+    
Sbjct: 25  KSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGST 84

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF------ 206
            +  +  +    K+   R+ +  ++  D  ++   L+ LL     ++  MK         
Sbjct: 85  ESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQNYEMAQMKERLAALSSR 144

Query: 207 -----EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL-------------Y 248
                ++   ++ DL + E +  K   ++RE + ++++M   I  L              
Sbjct: 145 VGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSI 204

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + N +  N L      L Q +        +L + E+  +Q    +
Sbjct: 205 HDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKA 250



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 80/219 (36%), Gaps = 19/219 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E  +L++ +   +  ++  +    S +  +  + +   K     EE    +        
Sbjct: 118 VELQELLEKQNYEMAQMKERLAALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAM 177

Query: 150 SKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++       I+++ +          SI+     LEN+ +   A+L   ++     + L E
Sbjct: 178 AQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEK---NRQLQE 234

Query: 208 KNAVSQNDLNQQER---IVYKSTLELRENIHE----------QKNMLRHINELYDEANLE 254
           +  +++  L Q  R    + +   EL + I             +  +RH+    +E N E
Sbjct: 235 RLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEEKNQE 294

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                ++  +  E++ +  +D + +L      R Q  + 
Sbjct: 295 L-QRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLK 332


>gi|218661531|ref|ZP_03517461.1| putative protein secretion protein, HylD family [Rhizobium etli
           IE4771]
          Length = 326

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 78/212 (36%), Gaps = 18/212 (8%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD-EANLEFANYLKEISRDLEQ-N 269
           S+  +N  +  V K+  +L+      + +   +      + +L+ A Y  + +   +Q N
Sbjct: 114 SRAKVNSAKANVAKANADLQSASTSLERLKSLVRSNVSTQQSLDDATYKYDSAVAAKQIN 173

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQS--QPLM-KIVPHSK 326
           +       + L + E    +  I+SPI G I+             S   P++  I    K
Sbjct: 174 EAEVLASEADLQLAEVNLAKAKIISPIDGVILTRSVN-PGATVAASLSAPILFTIAGDLK 232

Query: 327 LTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEY 386
              ++  V    +  +  G  A      Y D       A IE+I    S+  NN+ T   
Sbjct: 233 KMELQVDVDEADVGKIAVGQKAKFTVDAYPDRSFP---AEIEQI-RFASEVVNNVVT--- 285

Query: 387 YEVILKITDLAFSDNNIELRNGFPAEVLFTAK 418
           Y+ +L +      + ++ LR    A    T +
Sbjct: 286 YKAVLSVD-----NADLLLRPRVTATADITVE 312



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 55/140 (39%), Gaps = 4/140 (2%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           +    + + V+++G +   + V +I S  SG ++   V+  S I  G  L   +  +   
Sbjct: 51  AKRGDLTVLVTATGSVQPTEQV-DISSELSGTVRDVNVDYNSTIKAGDVLAQLDTNKLEA 109

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE---KAFESREEQLLDFLGKYHSTCSK 151
            +   +  + + + ++    + L   +   + L+   ++  S ++ L D   KY S  + 
Sbjct: 110 DVKSSRAKVNSAKANVAKANADLQSASTSLERLKSLVRSNVSTQQSLDDATYKYDSAVAA 169

Query: 152 VFNYGISSVYRSLKMKLTRM 171
                   +     ++L  +
Sbjct: 170 KQINEAEVLASEADLQLAEV 189


>gi|195110221|ref|XP_001999680.1| GI24654 [Drosophila mojavensis]
 gi|193916274|gb|EDW15141.1| GI24654 [Drosophila mojavensis]
          Length = 565

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 74/212 (34%), Gaps = 13/212 (6%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT- 169
             E+ A++        LE+A ++ +        +     SK+        Y +   +   
Sbjct: 41  KAERKAMEAYRFDSSALERAADAAKTLERSRHAREALELSKMQESTRQQEYATKVKEYEA 100

Query: 170 --RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKST 227
                 +   R+D E +   L       Q+       L  K    ++ L QQ+R+  ++ 
Sbjct: 101 HIEQAKVEQKRIDHEERRKTLIEETKQQQQRAQYQDQLSRKRY--EDQLVQQQRVQEENL 158

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            +  E++  Q+ M R   E   E  ++  N LK +  +L    R   D  ++   LEK R
Sbjct: 159 RKQEESVQRQEAMRRQTIE--HEIEMKEKNRLKLLEHELRAKAR--VDRENRDINLEKIR 214

Query: 288 EQKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
               + +    T V     ++ +        M
Sbjct: 215 ----LKAQEHRTTVLEGIRTAGSVIGAGAEAM 242


>gi|164655209|ref|XP_001728735.1| hypothetical protein MGL_4070 [Malassezia globosa CBS 7966]
 gi|159102619|gb|EDP41521.1| hypothetical protein MGL_4070 [Malassezia globosa CBS 7966]
          Length = 1472

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 67/210 (31%), Gaps = 7/210 (3%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             L+  +  E    +   +  +   R   D   S  +      + LE+A ++ E+   D 
Sbjct: 723 DLLMELD--EARAALATAQQQLATERN--DANASIDELKRQHENELEEARQAVEQARSDL 778

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
           + +       +         +     ++       +  +LE     L      H  +L  
Sbjct: 779 MIELDEARVALATAQQQLATQRNHANVSIDELKKQHDKELEGLRLALHQTQEEHANELEA 838

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            +   +    +Q  L  +   +  S   L++   + +  L       + A    A  L++
Sbjct: 839 SRTAHDN---AQQQLATERNHLRVSMDGLKKQHDDTQEALEKARSGSERARDFHAKELED 895

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           I   L+  Q+  A E + + +      Q+ 
Sbjct: 896 IQGALDAMQQQLATERNDMQVAMDELRQQH 925



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 63/201 (31%), Gaps = 7/201 (3%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            +    D  +  +   R H+      L   ++      +   S  E+  DF  K       
Sbjct: 839  SRTAHDNAQQQLATERNHLRVSMDGLKKQHDDTQEALEKARSGSERARDFHAKELEDIQG 898

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRL-DLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
              +     +          M  +      +LE+  + +      H ++   M+  FE+  
Sbjct: 899  ALDAMQQQLATERNDMQVAMDELRQQHAKELESTRAAMDESQRRHSEETQGMRMSFERGH 958

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
                    QE  + ++   L++   +      + +   ++A    A  L + +  L++ Q
Sbjct: 959  ------RLQETELNETRQALQDARDQHAKERENTHSYLEDAQQRRAKELNQANHALQETQ 1012

Query: 271  RTFADEMSKLTILEKTREQKT 291
               A    +   L    E++ 
Sbjct: 1013 LLQAKNQHQTQELCDVHERQE 1033



 Score = 43.5 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 76/219 (34%), Gaps = 28/219 (12%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
              D+++   K L       + A  F   +      + E+RE+Q    L +   +  +  
Sbjct: 482 SFEDIRQRHAKELDSANAALEEAQSFHAVEQTHANVSQEAREQQHTKELDQMRHSLRQAE 541

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN--------- 204
              +++    +   +  ++S Y    +L++    L+     H ++L   +          
Sbjct: 542 QT-LAAQQARMDAAMEELKSQYTK--ELDDVKQALKHANEEHARELDGSRETTDKAQQQL 598

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR---------------HINELYD 249
           L E+N ++++ +++ +R+      ++   +   +  L                      +
Sbjct: 599 LAEQNRMNES-VDELKRLHATELGDVNTALMAAQQQLATERNHMSVTRDELKKQYTSELE 657

Query: 250 EANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           EA L         +++LE+ + T AD   +L        
Sbjct: 658 EARLALERMQAAHAKELEETRLTLADTQEQLATERNDAS 696


>gi|119617780|gb|EAW97374.1| protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF),
           interacting protein (liprin), alpha 2, isoform CRA_a
           [Homo sapiens]
          Length = 1210

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 24/226 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L +  K   + +R  +      +  L  +     +   +  EQ +    K  S+    
Sbjct: 178 KSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGST 237

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF------ 206
            +  +  +    K+   R+ +  ++  D  ++   L+ LL     ++  MK         
Sbjct: 238 ESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQNYEMAQMKERLAALSSR 297

Query: 207 -----EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL-------------Y 248
                ++   ++ DL + E +  K   ++RE + ++++M   I  L              
Sbjct: 298 VGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSI 357

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + N +  N L      L Q +        +L + E+  +Q    +
Sbjct: 358 HDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKA 403



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 80/219 (36%), Gaps = 19/219 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E  +L++ +   +  ++  +    S +  +  + +   K     EE    +        
Sbjct: 271 VELQELLEKQNYEMAQMKERLAALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAM 330

Query: 150 SKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++       I+++ +          SI+     LEN+ +   A+L   ++     + L E
Sbjct: 331 AQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEK---NRQLQE 387

Query: 208 KNAVSQNDLNQQER---IVYKSTLELRENIHE----------QKNMLRHINELYDEANLE 254
           +  +++  L Q  R    + +   EL + I             +  +RH+    +E N E
Sbjct: 388 RLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEEKNQE 447

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                ++  +  E++ +  +D + +L      R Q  + 
Sbjct: 448 L-QRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLK 485


>gi|121713140|ref|XP_001274181.1| myosin type II heavy chain, putative [Aspergillus clavatus NRRL 1]
 gi|119402334|gb|EAW12755.1| myosin type II heavy chain, putative [Aspergillus clavatus NRRL 1]
          Length = 2406

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 83/242 (34%), Gaps = 27/242 (11%)

Query: 79   LQGTPLLTFEDI--ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
              G  +   E    E    ++     +         +++ +  L     +LE     ++ 
Sbjct: 1042 QAGEIIQRLESEKQELQARLEELDSRLLGAESSSAEKEAHVKDLEQDMKMLESHLSLKDR 1101

Query: 137  QLLDFLGKYHSTCSKVF------NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
            +L +   K   T   +       +  +    + +K  +   RSI     DL + S+    
Sbjct: 1102 KLQELEAKLLKTDQDLDIKLARTSQELEQSKKQIKDLIDENRSIRQQISDLSSTSTGYEE 1161

Query: 191  LLSSHQKDLTMMKN------------------LFEKNAVSQNDLNQQERIVYKSTLELRE 232
            +L   + ++++++N                  L  ++   Q  L + +       LE R+
Sbjct: 1162 MLRRKESEISVLRNDARRYEDEKRSMQTEKASLSRRHDDMQTRLRELQAESDAMKLEKRQ 1221

Query: 233  NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
               E  ++ + + E   E + E     K + + ++  +       + L+   ++R+   +
Sbjct: 1222 LEREVTDVKKLLEEKISE-DAEAGQSRKLLEQQIQDLKNELFQAQADLSRERQSRDDVQM 1280

Query: 293  LS 294
            L+
Sbjct: 1281 LA 1282



 Score = 46.5 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 81/227 (35%), Gaps = 11/227 (4%)

Query: 68   KKFQV-ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
            ++ QV      + +   L  F D++     +  K +       +   ++   F   +   
Sbjct: 1872 QELQVAREQDAVSRNQLLQEFSDLQIRLDAETSKSADLASSLSLYKSRADEYFNKLEQAE 1931

Query: 127  LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
            +     +R EQ      +               +  +L   L R   +   R+  E++++
Sbjct: 1932 ITVLKSTRAEQFAKSQAQEAEETCAQIMAERKQI-DALVEDLQRQTQMLEARM--EDQAA 1988

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L+  L + Q+    +++   + A+   D+  +E  + ++ ++ +       N L    E
Sbjct: 1989 ELQGALQTKQRLQNELEDYRNQRAI---DIEDKETSMEQTRMKYQREFSTLNNEL----E 2041

Query: 247  LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
            +  E  L   +    +  +LE  +  + +E+   +   K + +  I 
Sbjct: 2042 MEREKVLNGRSENARLRGELEDLRSKWDNEVLNSSTWAKEKSRMEIT 2088


>gi|26249822|ref|NP_755862.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli CFT073]
 gi|82778549|ref|YP_404898.1| p-hydroxybenzoic acid efflux subunit AaeA [Shigella dysenteriae
           Sd197]
 gi|91212661|ref|YP_542647.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli UTI89]
 gi|110643476|ref|YP_671206.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli 536]
 gi|117625525|ref|YP_858848.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli APEC
           O1]
 gi|170018515|ref|YP_001723469.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli ATCC
           8739]
 gi|170683027|ref|YP_001745513.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli
           SMS-3-5]
 gi|188496074|ref|ZP_03003344.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           53638]
 gi|191173833|ref|ZP_03035354.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           F11]
 gi|194439180|ref|ZP_03071261.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           101-1]
 gi|209920711|ref|YP_002294795.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli SE11]
 gi|215488549|ref|YP_002330980.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli O127:H6
           str. E2348/69]
 gi|218560303|ref|YP_002393216.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli S88]
 gi|218691523|ref|YP_002399735.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli ED1a]
 gi|227887956|ref|ZP_04005761.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           83972]
 gi|237706012|ref|ZP_04536493.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia sp.
           3_2_53FAA]
 gi|253771929|ref|YP_003034760.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254038401|ref|ZP_04872459.1| p-hydroxybenzoic acid efflux system component [Escherichia sp.
           1_1_43]
 gi|254163178|ref|YP_003046286.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli B str.
           REL606]
 gi|291284609|ref|YP_003501427.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O55:H7 str. CB9615]
 gi|300817507|ref|ZP_07097723.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           107-1]
 gi|300917442|ref|ZP_07134106.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           115-1]
 gi|300929936|ref|ZP_07145376.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           187-1]
 gi|300937355|ref|ZP_07152191.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           21-1]
 gi|300979746|ref|ZP_07174696.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           200-1]
 gi|300991026|ref|ZP_07179447.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           45-1]
 gi|301022178|ref|ZP_07186095.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           69-1]
 gi|301047915|ref|ZP_07194962.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           185-1]
 gi|306816424|ref|ZP_07450556.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli NC101]
 gi|307313060|ref|ZP_07592686.1| efflux transporter, RND family, MFP subunit [Escherichia coli W]
 gi|309785567|ref|ZP_07680198.1| uncharacterized protein ydhJ [Shigella dysenteriae 1617]
 gi|312972489|ref|ZP_07786663.1| uncharacterized protein ydhJ [Escherichia coli 1827-70]
 gi|331649033|ref|ZP_08350121.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli M605]
 gi|331654839|ref|ZP_08355839.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli M718]
 gi|331659521|ref|ZP_08360463.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli TA206]
 gi|331664849|ref|ZP_08365754.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli TA143]
 gi|331674758|ref|ZP_08375517.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli TA280]
 gi|60389411|sp|Q8FD50|AAEA_ECOL6 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|122422251|sp|Q1R698|AAEA_ECOUT RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|123048800|sp|Q0TCM4|AAEA_ECOL5 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|123561481|sp|Q32B98|AAEA_SHIDS RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|158512557|sp|A1AGD4|AAEA_ECOK1 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|189027257|sp|B1IQN8|AAEA_ECOLC RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|226706817|sp|B7MC02|AAEA_ECO45 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|226706823|sp|B6I1V9|AAEA_ECOSE RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|226706824|sp|B1LGK7|AAEA_ECOSM RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|254801255|sp|B7UJX3|AAEA_ECO27 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|254801257|sp|B7N0M6|AAEA_ECO81 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|26110250|gb|AAN82436.1|AE016767_196 Hypothetical protein yhcQ [Escherichia coli CFT073]
 gi|81242697|gb|ABB63407.1| putative membrane protein [Shigella dysenteriae Sd197]
 gi|91074235|gb|ABE09116.1| hypothetical protein YhcQ [Escherichia coli UTI89]
 gi|110345068|gb|ABG71305.1| hypothetical protein YhcQ [Escherichia coli 536]
 gi|115514649|gb|ABJ02724.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|169753443|gb|ACA76142.1| efflux transporter, RND family, MFP subunit [Escherichia coli ATCC
           8739]
 gi|170520745|gb|ACB18923.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           SMS-3-5]
 gi|188491273|gb|EDU66376.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           53638]
 gi|190905883|gb|EDV65501.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           F11]
 gi|194421876|gb|EDX37882.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           101-1]
 gi|209913970|dbj|BAG79044.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|215266621|emb|CAS11060.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218367072|emb|CAR04843.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           S88]
 gi|218429087|emb|CAR09894.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           ED1a]
 gi|222034951|emb|CAP77694.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           LF82]
 gi|226840025|gb|EEH72046.1| p-hydroxybenzoic acid efflux system component [Escherichia sp.
           1_1_43]
 gi|226899052|gb|EEH85311.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia sp.
           3_2_53FAA]
 gi|227835352|gb|EEJ45818.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           83972]
 gi|242378778|emb|CAQ33569.1| AaeAB Hydroxylated, Aromatic Carboxylic Acid Efflux Transport
           System Protein A, subunit of AaeAB Hydroxylated,
           Aromatic Carboxylic Acid Efflux Transport System
           [Escherichia coli BL21(DE3)]
 gi|253322973|gb|ACT27575.1| efflux transporter, RND family, MFP subunit [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975079|gb|ACT40750.1| p-hydroxybenzoic acid efflux system component [Escherichia coli B
           str. REL606]
 gi|253979235|gb|ACT44905.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           BL21(DE3)]
 gi|281180275|dbj|BAI56605.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|284923257|emb|CBG36351.1| p-hydroxybenzoic acid efflux pump subunit A [Escherichia coli 042]
 gi|290764482|gb|ADD58443.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           O55:H7 str. CB9615]
 gi|294491705|gb|ADE90461.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           IHE3034]
 gi|300300258|gb|EFJ56643.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           185-1]
 gi|300307964|gb|EFJ62484.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           200-1]
 gi|300397645|gb|EFJ81183.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           69-1]
 gi|300406947|gb|EFJ90485.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           45-1]
 gi|300415325|gb|EFJ98635.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           115-1]
 gi|300457574|gb|EFK21067.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           21-1]
 gi|300462159|gb|EFK25652.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           187-1]
 gi|300529805|gb|EFK50867.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           107-1]
 gi|305849989|gb|EFM50448.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli NC101]
 gi|306906971|gb|EFN37479.1| efflux transporter, RND family, MFP subunit [Escherichia coli W]
 gi|307555327|gb|ADN48102.1| p-hydroxybenzoic acid efflux system component [Escherichia coli ABU
           83972]
 gi|307625166|gb|ADN69470.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli UM146]
 gi|308926687|gb|EFP72163.1| uncharacterized protein ydhJ [Shigella dysenteriae 1617]
 gi|309703662|emb|CBJ03003.1| p-hydroxybenzoic acid efflux pump subunit A [Escherichia coli ETEC
           H10407]
 gi|310334866|gb|EFQ01071.1| uncharacterized protein ydhJ [Escherichia coli 1827-70]
 gi|312947791|gb|ADR28618.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315062541|gb|ADT76868.1| p-hydroxybenzoic acid efflux system component [Escherichia coli W]
 gi|315289019|gb|EFU48417.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           110-3]
 gi|315294781|gb|EFU54124.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           153-1]
 gi|315300892|gb|EFU60112.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           16-3]
 gi|320194718|gb|EFW69348.1| Fusaric acid resistance protein fusE [Escherichia coli WV_060327]
 gi|320202151|gb|EFW76726.1| Fusaric acid resistance protein fusE [Escherichia coli EC4100B]
 gi|320640033|gb|EFX09614.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli O157:H7
           str. G5101]
 gi|320645603|gb|EFX14612.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli O157:H-
           str. 493-89]
 gi|320650913|gb|EFX19370.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli O157:H-
           str. H 2687]
 gi|320656294|gb|EFX24206.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320661984|gb|EFX29392.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320666818|gb|EFX33797.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli O157:H7
           str. LSU-61]
 gi|323189146|gb|EFZ74430.1| hypothetical protein ECRN5871_2745 [Escherichia coli RN587/1]
 gi|323376871|gb|ADX49139.1| efflux transporter, RND family, MFP subunit [Escherichia coli KO11]
 gi|323936221|gb|EGB32514.1| HlyD family protein secretion protein [Escherichia coli E1520]
 gi|323941665|gb|EGB37844.1| HlyD family protein secretion protein [Escherichia coli E482]
 gi|323951247|gb|EGB47122.1| HlyD family protein secretion protein [Escherichia coli H252]
 gi|323957618|gb|EGB53332.1| HlyD family protein secretion protein [Escherichia coli H263]
 gi|323961110|gb|EGB56724.1| HlyD family protein secretion protein [Escherichia coli H489]
 gi|323966420|gb|EGB61854.1| HlyD family protein secretion protein [Escherichia coli M863]
 gi|323970343|gb|EGB65613.1| HlyD family protein secretion protein [Escherichia coli TA007]
 gi|323979048|gb|EGB74126.1| HlyD family protein secretion protein [Escherichia coli TW10509]
 gi|324009103|gb|EGB78322.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           57-2]
 gi|324015836|gb|EGB85055.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           60-1]
 gi|324018386|gb|EGB87605.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           117-3]
 gi|324119600|gb|EGC13482.1| HlyD family protein secretion protein [Escherichia coli E1167]
 gi|330909285|gb|EGH37799.1| fusaric acid resistance protein fusE [Escherichia coli AA86]
 gi|331042780|gb|EGI14922.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli M605]
 gi|331048221|gb|EGI20298.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli M718]
 gi|331054103|gb|EGI26132.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli TA206]
 gi|331058097|gb|EGI30079.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli TA143]
 gi|331068197|gb|EGI39593.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli TA280]
 gi|332345197|gb|AEE58531.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 310

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 22/188 (11%)

Query: 204 NLFEKNAVS--------QNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLE 254
            L +K  V         Q  L + +  V    +  +E   E     R  +  +  E   +
Sbjct: 67  QLVKKGQVLFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQ 126

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N L+ +   L + Q T         + +   E+  I +P  G +     ++   +  +
Sbjct: 127 ANNVLQTVLHQLAKAQATR-------DLAKLDLERTVIRAPADGWVTNLNVYT-GEFITR 178

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               + +V  +   Y+ A +   +++ V+ GY A +          K  K  ++ +   +
Sbjct: 179 GSTAVALVKQNS-FYVLAYMEETKLEGVRPGYRAEIT----PLGSNKVLKGTVDSVAAGV 233

Query: 375 SQQDNNLQ 382
           +   +   
Sbjct: 234 TNASSTRD 241



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    +   + L+ +  I     W            + +     +VV I    SG+
Sbjct: 2   KTLIRKFSRTAITVVLVILAFIAIFNAWVYYTE----SPWTRDARFSADVVAIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V +   + +G  L T +       ++  +  +   +  +  EK       N+  V
Sbjct: 58  ITQVNVHDNQLVKKGQVLFTIDQPRYQKALEEAQADVAYYQV-LAQEKRQEAGRRNRLGV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVLHQLAKAQATRDLAKL 150


>gi|303326594|ref|ZP_07357036.1| macrolide-specific efflux protein MacA [Desulfovibrio sp. 3_1_syn3]
 gi|302862582|gb|EFL85514.1| macrolide-specific efflux protein MacA [Desulfovibrio sp. 3_1_syn3]
          Length = 410

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 94/325 (28%), Gaps = 52/325 (16%)

Query: 121 NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN-RL 179
            ++ D++  +  +R   +   +       +       + V   +     R+  +     L
Sbjct: 32  TSRPDIIYLSDAARRSAVRHVVNATGEVKAAQLVTVGAQVSGQIVKIHVRVGQMVNKGEL 91

Query: 180 DLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKN 239
             E  ++  +  L + +  L   +   E   VS+    +Q R        LR      + 
Sbjct: 92  IAEINATTQQNQLETDKALLQSYQERLESKKVSRRIAERQYR----REKALRAREAASQE 147

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            L      +  A  E A    E+   + Q +     +M              I +P+AGT
Sbjct: 148 DLESAETAWALARAEVA----ELEALVRQTELAVNTDME-------NLGYTRITAPLAGT 196

Query: 300 IVYNQSFSSSNYAQQSQ---PLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYA 356
           +V             +Q    + +I        I  +++   I  V+ G         Y 
Sbjct: 197 VVSVPV-EEGQTVNAAQSTPTIAQIA-DLGSMEICLEISEGDIPAVRPGMAV-----SYT 249

Query: 357 DIREKKFK--AIIEKIDPIISQQDNNL-------------------QTQEYYEVILKITD 395
            + E      A++  IDP ++   +                      T  YY     +  
Sbjct: 250 ILGEPDVSAHAVLTSIDPGLTTLSDGTYESSSSSSSGSASSSSSSSGTAVYYYGKALVD- 308

Query: 396 LAFSDNNIELRNGFPAEVLFTAKNT 420
               + +  LR G   + +      
Sbjct: 309 ----NGDARLRIGMTVQAVIVTAEK 329



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 67/179 (37%), Gaps = 19/179 (10%)

Query: 8   NLKRNHPASLKRMTLLSIIGIIGLITW---------------SILLPIEISVSSSGEILN 52
            LK      L  M L   +  +GL  W               +    +   V+++GE+  
Sbjct: 2   KLKTAGGKRLLGMALAVAVLAVGLGLWTSGTSRPDIIYLSDAARRSAVRHVVNATGEVKA 61

Query: 53  EDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDT 112
              +V + +  SG I K  V  G  + +G  +         + ++  K  +++ +  +++
Sbjct: 62  A-QLVTVGAQVSGQIVKIHVRVGQMVNKGELIAEINATTQQNQLETDKALLQSYQERLES 120

Query: 113 EKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS--TCSKVFNYGISSVYRSLKMKLT 169
           +K +   +  +    EKA  +RE    + L    +    ++     + ++ R  ++ + 
Sbjct: 121 KKVSR-RIAERQYRREKALRAREAASQEDLESAETAWALARAEVAELEALVRQTELAVN 178


>gi|226941159|ref|YP_002796233.1| Type I antifreeze protein:HlyD family secretion protein [Laribacter
           hongkongensis HLHK9]
 gi|226716086|gb|ACO75224.1| Type I antifreeze protein:HlyD family secretion protein [Laribacter
           hongkongensis HLHK9]
          Length = 357

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 59/172 (34%), Gaps = 7/172 (4%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSIL---LPIEISVSSSGEILNEDNVVEIKSPFSG 65
           +K      L R   ++ + ++ L+ W ++            +G I   +  V++ +   G
Sbjct: 2   MKPEIRRWLVRGLAVAGVVLVALLVWKLVYSGGEDGRFARGNGRIEATE--VDVAAKSGG 59

Query: 66  IIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
            + +  V  G  +  G  +   +       +   +  + N     +T  + +        
Sbjct: 60  RVAEILVNEGDFVQAGQLVARMDQASLAAQLTQAQAQLANALSSRETMLAQVAQREADVV 119

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
           + E     R  +L D  GK H+    +     +S  + +     R+R+   N
Sbjct: 120 MAEAVLVQRRAEL-DVSGKTHARSKALLADRATS-AQQVDDDAARLRNAEAN 169



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 27/285 (9%), Positives = 80/285 (28%), Gaps = 5/285 (1%)

Query: 134 REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
           R  ++L   G +      V     +S+   L     ++ +   +R  +  + +   A + 
Sbjct: 60  RVAEILVNEGDFVQAGQLVARMDQASLAAQLTQAQAQLANALSSRETMLAQVAQREADVV 119

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
             +  L   +   + +  +             S  ++ ++    +N   ++     +   
Sbjct: 120 MAEAVLVQRRAELDVSGKTHARSKALLADRATSAQQVDDDAARLRNAEANVAVAKAQIAA 179

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
             A         + Q Q       + +  LE       + +P AG + Y +         
Sbjct: 180 ARAALQA-ARAQVVQAQAGIDAAEAVVKRLEIDLADGDLHAPRAGRVQY-RIVQPGEVIA 237

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
               ++ +V      Y+   +  +    V  G    +              + +  +   
Sbjct: 238 GGGKVVSLV-DIADVYMTFFLPEQAAGKVGLGSDVHIVLDAAPQYVLPARVSYVASVAQF 296

Query: 374 ISQ--QDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             +  +  + + +  + V  ++           ++ G P      
Sbjct: 297 TPKSVETQDERQKMVFRVKARLDPALLKKYAEHVKTGLPGMAYVR 341


>gi|225849633|ref|YP_002729867.1| phosphodiesterase [Persephonella marina EX-H1]
 gi|225645450|gb|ACO03636.1| conserved hypothetical protein [Persephonella marina EX-H1]
          Length = 553

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 72/185 (38%), Gaps = 12/185 (6%)

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTR 170
           + E+ A + + NK ++  +A    EE + +F  +      ++     S         L +
Sbjct: 32  EKERKAEEIIKNKEEIEREARRKAEEIIKEFEAEAKRKAEEIVREAES---------LKQ 82

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQ---ERIVYKST 227
            + I + +  L+ K  L + L S  ++   + K L  + A  +  L +    E  + K  
Sbjct: 83  QQEIIIEKEILKRKQELEKELKSEREELQNLEKTLMSREAQLEKRLARLEHREEELDKKW 142

Query: 228 LELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTR 287
            E+++   E +++ + I E   +       Y+ E+ R     +    +E+ +    E   
Sbjct: 143 DEIKKLEEEIRSIQKEIEEKEAKLKAAEEQYMLELQRIASMTKEEAREELLRKVEEEAKL 202

Query: 288 EQKTI 292
           E   +
Sbjct: 203 EAAKL 207


>gi|222149536|ref|YP_002550493.1| HlyD family secretion protein [Agrobacterium vitis S4]
 gi|221736518|gb|ACM37481.1| HlyD family secretion protein [Agrobacterium vitis S4]
          Length = 378

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 76/245 (31%), Gaps = 34/245 (13%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           S+ L +       +   A L+ ++  L            +Q    + ER + +    +  
Sbjct: 80  SLILQKAQYAANQAKAEASLAQYKIQLID----------AQASAAEAERQLARGQSLVSG 129

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                  +     + Y+ + +   N +    + +   +      +S++  L     +  I
Sbjct: 130 GTISTAQV-----QQYETSAINARNKVDSARQSIAIAEAELKVVISQVADLNLKLARTDI 184

Query: 293 LSPIAGTIVYNQSFSSSNY-AQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVR 351
            +P  G I    +       A   QPL  I+       + A+V+   +Q ++ G  A + 
Sbjct: 185 KAPFGGLITARNAR-IGAIAAGSGQPLFTII-RDSKIELVAEVSESDMQKMRIGQPAEI- 241

Query: 352 FPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA 411
               A          +  I P IS            EV + + D   +        G  A
Sbjct: 242 --AIAGQATP-ISGHVRLISPAISPTTRLG------EVHILLDDSDAARQ------GMYA 286

Query: 412 EVLFT 416
             L T
Sbjct: 287 SALIT 291



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 72/220 (32%), Gaps = 14/220 (6%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGI-IKKFQVENGSQILQGTPLLTFEDIETT 93
           +    +   V  +G +   + +  ++    GI I+    + G ++  G  L T +     
Sbjct: 24  ASTQSLTDKVIGTGSVKAVEEI-YVQPEVDGIAIRNLLADVGDKVKAGQVLATLDGDSL- 81

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ-------LLDFLGKYH 146
            ++   + +    +      +  +  ++ +    E   +    Q       +     + +
Sbjct: 82  -ILQKAQYAANQAKAEASLAQYKIQLIDAQASAAEAERQLARGQSLVSGGTISTAQVQQY 140

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
            T +      + S  +S+ +    ++ +     DL  K +  R  + +    L   +N  
Sbjct: 141 ETSAINARNKVDSARQSIAIAEAELKVVISQVADLNLKLA--RTDIKAPFGGLITARN-A 197

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
              A++         I+  S +EL   + E       I +
Sbjct: 198 RIGAIAAGSGQPLFTIIRDSKIELVAEVSESDMQKMRIGQ 237


>gi|212636095|ref|YP_002312620.1| RND family efflux transporter MFP subunit [Shewanella piezotolerans
           WP3]
 gi|212557579|gb|ACJ30033.1| Efflux transporter, RND family, MFP subunit [Shewanella
           piezotolerans WP3]
          Length = 418

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 95/256 (37%), Gaps = 5/256 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +  SG ++ E ++  I +  +G +++   + G+ + QG  LL   +      ++  K  +
Sbjct: 62  IRGSGVLVPE-DIRWIATDTAGRVERIYAKAGAVVQQGDLLLELSNPLLVQQLEEDKSEL 120

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           + L      E  A++      +      +   E+ +  L  ++    +  N         
Sbjct: 121 EALTAQTKAEIVAMESALLDLEAAVVNEKLNLERAMLTLKAHNKLLEQGVNIVSKIALAE 180

Query: 164 LKMKLTRMRSI-YLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           +K+ + + +    L +  L  +   L A   + Q  L  M  + +++ V Q D       
Sbjct: 181 IKIDVEQSKKRWQLEQRRLAKRQQNLEAQKVALQARLKRMHRVVQRSQV-QVDNLNVRAT 239

Query: 223 VYKSTLELRENIHEQKNMLRHINELY--DEANLEFANYLKEISRDLEQNQRTFADEMSKL 280
           +     E+   + +Q N+   + +L   D    E     K+I   +   + T     +++
Sbjct: 240 MDSVVQEMSIQMGQQVNVGATLAKLARNDRYIAELQIPEKQIKDVVLGQKVTIDTRSNQI 299

Query: 281 TILEKTREQKTILSPI 296
           T +    +   I S +
Sbjct: 300 TGIVNRIDLAVINSSV 315



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 63/205 (30%), Gaps = 20/205 (9%)

Query: 179 LDLENKSSLLRALLSSHQKDLTMMKN-LFEKNAVSQNDLNQQERIVYKSTL--ELREN-- 233
             LE   S L AL +  + ++  M++ L +  A   N+    ER +       +L E   
Sbjct: 111 QQLEEDKSELEALTAQTKAEIVAMESALLDLEAAVVNEKLNLERAMLTLKAHNKLLEQGV 170

Query: 234 -------IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKT 286
                  + E K  +    + +       A   + +       Q         +   +  
Sbjct: 171 NIVSKIALAEIKIDVEQSKKRWQLEQRRLAKRQQNLEAQKVALQARLKRMHRVVQRSQVQ 230

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
            +   + + +   +                 L K+   +       ++  KQI+ V  G 
Sbjct: 231 VDNLNVRATMDSVVQEMSI-QMGQQVNVGATLAKLA-RNDRYIAELQIPEKQIKDVVLGQ 288

Query: 347 TATVRFPHYADIREKKFKAIIEKID 371
             T+      D R  +   I+ +ID
Sbjct: 289 KVTI------DTRSNQITGIVNRID 307


>gi|149275740|ref|ZP_01881885.1| efflux transporter, MFP component, RND family protein [Pedobacter
           sp. BAL39]
 gi|149233168|gb|EDM38542.1| efflux transporter, MFP component, RND family protein [Pedobacter
           sp. BAL39]
          Length = 414

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 60/171 (35%), Gaps = 9/171 (5%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFED-------IETT 93
           E  V  +  ++   +V  + SP  G + +   ENG+ +++GTPLL   +         + 
Sbjct: 58  EDVVLLNASVVPLTSV-IVSSPEGGTVAEIYTENGASVVKGTPLLRIINPNALSNYTSSE 116

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             I  +   ++ LR  ++  +  +       +       SR+ +L   L        + F
Sbjct: 117 TSITEQINQLRKLRLDLEQNQRMMSQDMMDIEN-SLRTASRKYKLDSTLYAKKVITREEF 175

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
           N         +  +    +++ +       +   +   +    + L  ++ 
Sbjct: 176 NTSSQDYEYYMGRRKLLKQAVVIENQGRVMQLKQIDISIGRMNESLETIRQ 226


>gi|148994812|ref|ZP_01823867.1| hypothetical protein CGSSp9BS68_01443 [Streptococcus pneumoniae
           SP9-BS68]
 gi|147927007|gb|EDK78050.1| hypothetical protein CGSSp9BS68_01443 [Streptococcus pneumoniae
           SP9-BS68]
          Length = 239

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 66/215 (30%), Gaps = 10/215 (4%)

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           + +NQ    +  S   L+       ++  + N L  +  +    +L+  S+     +   
Sbjct: 22  SQINQSIAGLESSIASLKIQQAGIGSVATYDNSLATKIEVLRTQFLQTASQQQLTVENQL 81

Query: 274 ADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYI 330
            +   +L    +  E  T+ +P  G +  N  F   N       + ++ P    ++   I
Sbjct: 82  TELKVQLDQATQRLENNTLTAPSKGIVHLNSEFEGENRIPTGTEIAQVFPIITDTREVLI 141

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVI 390
              V    +  + KG T  ++     +         ++ ID   ++ +     +      
Sbjct: 142 TYYVASDYLPLLDKGQTVRLKLEKIGN-HGITIIGQLQTIDQTPTRTEQGNLFKLTALAK 200

Query: 391 LKITDLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
           L   D         ++ G    V       T    
Sbjct: 201 LSNEDSKL------IQYGLQGRVTSVTAKKTYFDY 229


>gi|86357008|ref|YP_468900.1| exopolysaccharide biosynthesis protein [Rhizobium etli CFN 42]
 gi|86281110|gb|ABC90173.1| exopolysaccharide biosynthesis protein (OMA family outer membrane
           saccharide export protein) [Rhizobium etli CFN 42]
          Length = 438

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 56/194 (28%), Gaps = 9/194 (4%)

Query: 94  DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVF 153
             ID   +        +  E +    +          F+        F    ++    +F
Sbjct: 172 REIDHSILRSTAKLSRLQAEMAGAKEIT---------FDQTTGADQQFSSGIYNEERVIF 222

Query: 154 NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               S++ R  K        +      LE K       + S +  LT +K+L +K     
Sbjct: 223 QARASALERQSKALTELRELLTTEISTLEEKLVGADENIKSVEDQLTSVKSLVQKGLTIS 282

Query: 214 NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
           +     ER++     +  + +       + ++E              E++ + +  +   
Sbjct: 283 SRQLDLERLLTTYRSDKLDLVTAIMRGRQAVSETTRNLEGLSDTRRSEVAVEAQAERANL 342

Query: 274 ADEMSKLTILEKTR 287
                K  + +K  
Sbjct: 343 DQLKMKREMTQKLL 356


>gi|23013486|ref|ZP_00053375.1| COG0845: Membrane-fusion protein [Magnetospirillum magnetotacticum
           MS-1]
          Length = 428

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 49/139 (35%), Gaps = 5/139 (3%)

Query: 4   FMWKNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPF 63
                L +   A+  R T +  I  + +     L P+  SV +  + +   + + +++P 
Sbjct: 147 LPRATLSQRLKAADGRRTRIGAIAALAV----ALFPVTGSVLAPADSVPA-HPIIVRAPL 201

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
            G++    V+    + +G PL   +  + T  +D+ +               A+ F    
Sbjct: 202 DGVVDHIAVQPNDSVSEGQPLFELDATQLTGRLDVARQQWATAEAEYRQAAQAMVFDGKA 261

Query: 124 YDVLEKAFESREEQLLDFL 142
              +       EE+  D  
Sbjct: 262 KAQVAILAGKAEEKAADVR 280



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 95/282 (33%), Gaps = 16/282 (5%)

Query: 128 EKAFESREEQLLDFLGKYH--STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
           ++AF  +E  LL  L      S  + +    +S   ++   + TR+ +I    + L   +
Sbjct: 121 DEAFAEQEIALLAHLASLVRVSRLALLPRATLSQRLKAADGRRTRIGAIAALAVALFPVT 180

Query: 186 SLLRALLSSHQKDLTMMKN----LFEKNAVSQND-LNQQERIVYKSTLELRENIHEQKNM 240
             + A   S      +++     + +  AV  ND +++ + +      +L   +   +  
Sbjct: 181 GSVLAPADSVPAHPIIVRAPLDGVVDHIAVQPNDSVSEGQPLFELDATQLTGRLDVARQQ 240

Query: 241 LRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTI 300
                  Y +A      +  +    +        ++ + + +LE    + ++ SP AG +
Sbjct: 241 WATAEAEYRQAAQAMV-FDGKAKAQVAILAGKAEEKAADVRLLESQLARISVKSPRAGVV 299

Query: 301 VYNQSFS-SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           V++             + +M  V   K T I A V    +  V  G     R   +  + 
Sbjct: 300 VFDDPTDWIGKPVAVGEKVMA-VADEKDTEIDAWVAVADVGEVTAG----ARLTMF--LN 352

Query: 360 EKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDN 401
                 +   +  I  +      +   + V   + D A    
Sbjct: 353 TAPLSPVHATVRSIAYEASARPDSTIVHRVRASLADPADRPR 394


>gi|332231119|ref|XP_003264745.1| PREDICTED: myosin-9 isoform 2 [Nomascus leucogenys]
          Length = 1922

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 5/199 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ E+  L+  N K    +K  E R  +    L +     SK
Sbjct: 958  ARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTE-EEEKSK 1016

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +     +     R+R     R +LE     L    +     +     L  + A 
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIA---ELQAQIAE 1073

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +  L ++E  +  +   + E   ++   L+ I EL  +   E    L+       + ++
Sbjct: 1074 LKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELESQI-SELQEDLESERASRNKAEK 1132

Query: 272  TFADEMSKLTILEKTREQK 290
               D   +L  L+   E  
Sbjct: 1133 QKRDLGEELEALKTELEDT 1151



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 68/209 (32%), Gaps = 5/209 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +D   +   +      K     + + ++ +  L  +    E+A    +++  +   + 
Sbjct: 1653 ELDDTRASR--EEILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEI 1710

Query: 146  HSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             ++  K  +       +   +      +     N   + ++       +     DL + +
Sbjct: 1711 ANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLER 1770

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEI 262
            +  +KN  ++  L +Q + +     E+   +  + K  +  +     +   +  N  KE 
Sbjct: 1771 SHAQKNENARQQLERQNKELKVKLQEMEGTVKSKYKASITALEAKIAQLEEQLDNETKER 1830

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +Q +RT       L  ++  R    
Sbjct: 1831 QAACKQVRRTEKKLKDVLLQVDDERRNAE 1859



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 70/225 (31%), Gaps = 37/225 (16%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH-------------- 146
               + LR  +  +K  L+ + +  +   +  E R + L     K                
Sbjct: 897  AEAEELRARLTAKKQELEEICHDLEARVEEEEERCQHLQTEKKKMQQNIQELEEQLEEEE 956

Query: 147  --------------------STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                     +       + +  K+   R+     N  + E KS 
Sbjct: 957  SARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSK 1016

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L  L + H+  +T ++    +    + +L +  R +   + +L + I E +  +  +  
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKM 1076

Query: 247  LYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTRE 288
               +   E    L  +  +  Q     +   +  S+++ L++  E
Sbjct: 1077 QLAKKEEELQAALARVEEEAAQKNMALKKIRELESQISELQEDLE 1121



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 66/197 (33%), Gaps = 8/197 (4%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            S+  L       +  ++ +  + + LE   ++ E+  L       +  ++          
Sbjct: 1519 SVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDE 1578

Query: 162  RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-------EKNAVSQN 214
            +S + K   +R +     +LE++       +++ +K    +K+L        +    +  
Sbjct: 1579 QSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEAIK 1638

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             L + +  +     EL +    ++ +L    E   +     A  + ++  +L   +R   
Sbjct: 1639 QLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMI-QLQEELAAAERAKR 1697

Query: 275  DEMSKLTILEKTREQKT 291
                +   L       +
Sbjct: 1698 QAQQERDELADEIANSS 1714



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 75/235 (31%), Gaps = 29/235 (12%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D ++ +        ++ +   ++ E+            LE   +  E  +          
Sbjct: 1577 DEQSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEA 1636

Query: 149  CSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--- 203
              ++      +    R L         I     + E K   + A +   Q++L   +   
Sbjct: 1637 IKQLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMIQLQEELAAAERAK 1696

Query: 204  --------NLFE-------KNAVSQNDLNQQERIVYKSTLELRENIH-------EQKNML 241
                     L +       K A++  +  + E  + +   EL E            K   
Sbjct: 1697 RQAQQERDELADEIANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKAN 1756

Query: 242  RHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              I+++  + NLE ++  K     + LE+  +    ++ ++    K++ + +I +
Sbjct: 1757 LQIDQINTDLNLERSHAQKNENARQQLERQNKELKVKLQEMEGTVKSKYKASITA 1811



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 52/167 (31%), Gaps = 10/167 (5%)

Query: 135  EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
            E+   +   K       +       + +  K+   R+     N  + E KS  L  L + 
Sbjct: 965  EKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNK 1024

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQER-------IVYKSTLELRENIHEQKNMLRHINEL 247
            H+  +T ++    +    + +L +  R        +     EL+  I E K  L    E 
Sbjct: 1025 HEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEE 1084

Query: 248  YDEANLEFANYLKE---ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               A         +     + + + +   ++    L     +R +  
Sbjct: 1085 LQAALARVEEEAAQKNMALKKIRELESQISELQEDLESERASRNKAE 1131



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 73/210 (34%), Gaps = 12/210 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +  D  +   +       +   AL+    +   LE+  +    ++ D +         V
Sbjct: 1461 AEERDRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSV 1520

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                    ++ + ++   T++  +       E+    L   L + +      ++L  ++ 
Sbjct: 1521 HELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFE--RDLQGRDE 1578

Query: 211  VSQNDLNQQERIVYKSTLEL-----RENIHEQKNMLRHINELYDEANLEFANY-LKEISR 264
             S+    Q  R V +   EL     + ++         ++    EA+++ AN    E  +
Sbjct: 1579 QSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEAIK 1638

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILS 294
             L + Q    D M +L   +    ++ IL+
Sbjct: 1639 QLRKLQAQMKDCMRELD--DTRASREEILA 1666


>gi|320107955|ref|YP_004183545.1| RND family efflux transporter MFP subunit [Terriglobus saanensis
           SP1PR4]
 gi|319926476|gb|ADV83551.1| efflux transporter, RND family, MFP subunit [Terriglobus saanensis
           SP1PR4]
          Length = 405

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 53/178 (29%), Gaps = 22/178 (12%)

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSS 308
              ++E    L   +  ++  ++      S+    E   +  TI +P +G I    + + 
Sbjct: 160 QSRDMEATARLASANSAVKAAKQAKLAADSEYARAEAMMQYATIRAPFSGVITKRYANT- 218

Query: 309 SNYAQQS----QPLMKIV--PHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKK 362
            +  Q         M IV    + L  +   V    +  VK G    V        R   
Sbjct: 219 GSMIQAGTSSQTQAMPIVRLAQNDLLRLTLPVPVSAVSEVKNGQAVDVNLA--NPRRT-- 274

Query: 363 FKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
            +  I +    +      ++           T++   + +  L  G  AEV       
Sbjct: 275 LQGTITRSSNTVQMATRTME-----------TEVDVPNRDGSLVPGMYAEVHLHLAAR 321



 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 49/130 (37%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG +K  +V+ G ++ QG  L T E  E  D     +  +     ++ T ++A+   +  
Sbjct: 70  SGYVKNIRVDIGDRVHQGDILATLEVPEIQDDKAKARAGVAVAEANVVTAQAAVQQASAA 129

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
            ++   +F+   +      G        V           L    + +++    +L  ++
Sbjct: 130 TNMAHLSFQRIRDVAARDKGLVPRQEVDVAQSRDMEATARLASANSAVKAAKQAKLAADS 189

Query: 184 KSSLLRALLS 193
           + +   A++ 
Sbjct: 190 EYARAEAMMQ 199


>gi|297463001|ref|XP_605047.5| PREDICTED: myosin, heavy polypeptide 15 [Bos taurus]
          Length = 2004

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 65/224 (29%), Gaps = 25/224 (11%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +D                LR     E   +   N +   LE+A    + +L D L     
Sbjct: 1371 DDTIQRAEDLEDAKKKLALRLQEAAEAMGVA--NARNASLERARLRLQLELGDTLSDLGQ 1428

Query: 148  TCSKVFNYGISSV----------------YRSLKMKLTRMRSIYLNRLDLEN-------K 184
              S                             L       R++ +  L+L +        
Sbjct: 1429 ARSAAAALNQKQQHFDKSLDDWRRKHEESQAMLDAAKKEARALSIQLLELRHSYEEGTMS 1488

Query: 185  SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHI 244
               LR      +++++ + N   +   + + + + ++ + +   E++  + E +  L   
Sbjct: 1489 QEALRRENKHLKEEISNLTNQVREGKKNLSKMEKVKKQIEQEKNEVQMALEEAEGALERN 1548

Query: 245  NELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
                    LE ++   E+ R L +      +   K      + +
Sbjct: 1549 ESKVLRLQLELSDTKAELERKLSEKDEEIENFRKKQQCAIDSLQ 1592



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 9/204 (4%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +D+ET      K+     L+     E   ++ LN     L +A  + +E     L   
Sbjct: 947  EIDDLETLLAKSQKEKHATELKVKNLLE--EVESLNEDVSKLHRAARAAQETHQQTLEDL 1004

Query: 146  HSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             +   KV   +    ++ + +      +      R++ E +   +   L  +Q+ +  ++
Sbjct: 1005 RNEEEKVHTLSKAKLTLEQRVNELEGALEQESKARMNCEKEKCKVEGELKLNQESMDDLE 1064

Query: 204  ----NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                 L EK    + ++NQ    V      + +     K     I  L +E   E     
Sbjct: 1065 SRQLQLAEKLRRKELEMNQMRSKVENEKSLVAQLQKTVKEFQTQIQLLKEELEAERTTRA 1124

Query: 260  KEISRDLEQNQRTFADEMSKLTIL 283
            K + R+     R   D   +L   
Sbjct: 1125 K-VERERANLIRELEDMNERLEEA 1147



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 80/219 (36%), Gaps = 21/219 (9%)

Query: 79   LQGTPLLTFE-DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
             +   LL  + + ET   ++ +   +   +  ++    AL     + + +     +R ++
Sbjct: 877  EKNDLLLQLQAERETLANVEEQCELLIKSKIQLEASVKALSARVEEEEEINSKLTARGQK 936

Query: 138  LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL----RALLS 193
            L D   +            ++   +       +++++      L    S L    RA   
Sbjct: 937  LEDECSELKKEIDD-LETLLAKSQKEKHATELKVKNLLEEVESLNEDVSKLHRAARAAQE 995

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
            +HQ+ L  ++N  EK              + K+ L L + ++E +  L    E   +A +
Sbjct: 996  THQQTLEDLRNEEEKVH-----------TLSKAKLTLEQRVNELEGAL----EQESKARM 1040

Query: 254  EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                   ++  +L+ NQ +  D  S+   L +   +K +
Sbjct: 1041 NCEKEKCKVEGELKLNQESMDDLESRQLQLAEKLRRKEL 1079



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 71/198 (35%), Gaps = 15/198 (7%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            + T      +     LR  ++  ++ ++ L+ +  +     +  + QL +          
Sbjct: 1266 DVTAQKTKLRSENGELRKRLEEMEALINQLSREKSIFTLQIQDLKGQLAEETKS------ 1319

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  ++   +S K     +R  Y    +   K+ LL+ALL  +  ++   +  +E + 
Sbjct: 1320 ---QSALAQAVKSAKRDCDLLREQYEE--EQAAKAELLQALLKGNA-EMVKWRTKYEDDT 1373

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            + + +    E    K  L L+E   E   +    N   + A L     L +   DL Q +
Sbjct: 1374 IQRAE--DLEDAKKKLALRLQEA-AEAMGVANARNASLERARLRLQLELGDTLSDLGQAR 1430

Query: 271  RTFADEMSKLTILEKTRE 288
               A    K    +K+ +
Sbjct: 1431 SAAAALNQKQQHFDKSLD 1448



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 18/185 (9%), Positives = 57/185 (30%), Gaps = 4/185 (2%)

Query: 110  IDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
              TE + +     K        E   + +   +              I    + ++   +
Sbjct: 1752 AATEVANMSEALKKEQDTNAHLERMRKNMEQTIKDLQERLDDAEQTAIVGNRKQIQKLES 1811

Query: 170  RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
            R+R +     +LE++            +    +K L  +    + ++++ + ++    L+
Sbjct: 1812 RVRELE---AELESEVQRNSEAQRGAHRLERCIKELTHQVEEDKKNMSRMQTLMDNLQLK 1868

Query: 230  LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            ++    + ++     ++   +   +  + L E     E  +        K     K   Q
Sbjct: 1869 VQSYKQQIESAEAEASQYRSKYK-KQQHELNEAKERAEIAESQVNKLKMKAKEFGKKVRQ 1927

Query: 290  KTILS 294
              + +
Sbjct: 1928 VNVQA 1932


>gi|300022673|ref|YP_003755284.1| efflux transporter RND family, MFP subunit [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299524494|gb|ADJ22963.1| efflux transporter, RND family, MFP subunit [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 467

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 47/124 (37%), Gaps = 4/124 (3%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSA 116
           VE+++  SG + K    +G  +  G PL T +       +D  K ++   + ++   ++ 
Sbjct: 136 VEVRARVSGYLDKIHFTDGQMVKAGDPLFTIDRRPFQAALDQSKAAVSQAQANLAFAEAD 195

Query: 117 LDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYL 176
           L     + + L +     ++ L   +       + V     ++    L +  T + +   
Sbjct: 196 LK----RGESLVRGTTITQQTLDQRVQTMRVAEANVTAQEAATRQAQLDLDFTELAAPVS 251

Query: 177 NRLD 180
            R+ 
Sbjct: 252 GRIG 255


>gi|288573273|ref|ZP_06391630.1| efflux transporter, RND family, MFP subunit [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569014|gb|EFC90571.1| efflux transporter, RND family, MFP subunit [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 418

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 3/125 (2%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G +    +V  I+   SG I +   + GS + +G  L + +D      + L+K  +    
Sbjct: 73  GRVEPIQSV-SIRPQISGEIAEVHFQEGSMVKEGDLLFSIDDRRFRTTVSLRKAELAKAE 131

Query: 108 CHIDTEKSALDFL--NNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLK 165
            + D     L  L   +   V     +  +  LL    +     + +    I   Y  ++
Sbjct: 132 ANYDRASKYLKRLKAADPRSVSASDIDMAQSDLLQAKAQVQQAKASLSLAQIDLSYTKIR 191

Query: 166 MKLTR 170
             +T 
Sbjct: 192 APITG 196



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 74/211 (35%), Gaps = 14/211 (6%)

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY--RSLKMKLTRMRS 173
           A  F   +Y V +   E+R +       K  +    +     + +   R    ++  ++S
Sbjct: 21  AAAFFGREYFVGKAQDEARAQAQAVEQAKPQAPVVVLHVVRKADLAVPREYIGRVEPIQS 80

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           + + R  +  + + +     S  K+  ++ ++ ++   +   L + E        +   N
Sbjct: 81  VSI-RPQISGEIAEVHFQEGSMVKEGDLLFSIDDRRFRTTVSLRKAE------LAKAEAN 133

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                  L+ +      +    A+ +     DL Q +       + L++ +       I 
Sbjct: 134 YDRASKYLKRLKAADPRSVS--ASDIDMAQSDLLQAKAQVQQAKASLSLAQIDLSYTKIR 191

Query: 294 SPIAGTIVYNQSFSSSNYAQQS--QPLMKIV 322
           +PI G +     ++  NY   +    L KIV
Sbjct: 192 APITGKV-GEAFYTKGNYVTPAGSTTLTKIV 221


>gi|226952882|ref|ZP_03823346.1| RND family efflux transporter, MFP subunit [Acinetobacter sp. ATCC
           27244]
 gi|226836393|gb|EEH68776.1| RND family efflux transporter, MFP subunit [Acinetobacter sp. ATCC
           27244]
          Length = 439

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 96/268 (35%), Gaps = 26/268 (9%)

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
           S+  +++        +L  + K   L A + S +++     N  +    +  +   Q  +
Sbjct: 68  SVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSVRQE-----NELKTAEANIKNQQAQLAV 122

Query: 223 VYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
              +  ++      Q+ M         E     A+Y    ++    N +     ++ L  
Sbjct: 123 QQANLAKVEAEYKRQQTMFSQDATSRAELESALASYKTAQAQIAAINAQIEQSRLT-LAT 181

Query: 283 LEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHS--KLTYIRAKVTPKQIQ 340
            ++     +I++P+ GTIV             +Q    IV  +      ++A+++   + 
Sbjct: 182 AKEDLGYTSIVAPMDGTIVAI-VTEEGQTVNANQTAPTIVKLATLDNMTVKAQISEADVM 240

Query: 341 HVKKGYTATVRFPHYADIREKKFKAIIEKIDP---------IISQQDNNLQTQEYYEVIL 391
            V+KG   TV F    +  +K + A + +++P           +   ++  +  YY  + 
Sbjct: 241 KVEKGQ--TVYFTTLGNSEKKHY-AKLRQVEPAPNSINTETSSNSSSSSSNSAVYYNALF 297

Query: 392 KITDLAFSDNNIELRNGFPAEVLFTAKN 419
            +      + + +LR    A+V      
Sbjct: 298 DVP-----NEDGKLRIDMTAQVYIVLAE 320



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 1/108 (0%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE SV ++G +     +V + +  SG +KK  V+ G Q+ QG  +   + +   + +   
Sbjct: 51  IENSVLATGILEA-TKMVSVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSVRQENELKTA 109

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
           + +IKN +  +  +++ L  +  +Y   +  F        +      S
Sbjct: 110 EANIKNQQAQLAVQQANLAKVEAEYKRQQTMFSQDATSRAELESALAS 157


>gi|222086800|ref|YP_002545334.1| protein secretion protein [Agrobacterium radiobacter K84]
 gi|221724248|gb|ACM27404.1| protein secretion protein [Agrobacterium radiobacter K84]
          Length = 396

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 61/221 (27%), Gaps = 25/221 (11%)

Query: 207 EKNAVSQNDLNQQ--ERIVYKSTLELRENIHEQKNMLRHIN----ELYDEANLEFANYLK 260
            K   +   L+ Q  E        EL+            ++    E  +         + 
Sbjct: 115 AKGQATLAQLHAQLTEAHANAEESELQRLRAVSMGAKGTVSTSSVEQANATAAANKARVA 174

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ-QSQPLM 319
              + +   +       S++   +    +  I +P+AGT+    +      A   S PL 
Sbjct: 175 SAEQAIAVAEADLKVTDSQIADTDLKLARTGIKTPVAGTVASRNAR-IGAIANGSSDPLF 233

Query: 320 KIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDN 379
            I+       +   V+   I  +  G  A +          +K    +  + PI+     
Sbjct: 234 TII-RDSKLELVVDVSESDITKISIGQKALISLSG----SREKLSGTVRLVAPIVDSVTR 288

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
                    V + I +   +      R G         + T
Sbjct: 289 LGA------VHISIDEGDKA------RAGMYGSAEIVIRET 317


>gi|209883996|ref|YP_002287853.1| efflux transporter, RND family, MFP subunit [Oligotropha
           carboxidovorans OM5]
 gi|209872192|gb|ACI91988.1| efflux transporter, RND family, MFP subunit [Oligotropha
           carboxidovorans OM5]
          Length = 397

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 68/217 (31%), Gaps = 22/217 (10%)

Query: 14  PASLKRMTLLSIIGIIGLITWSIL----LPIEISVSSSGEILNED--------------N 55
           P+  +R  +L  +GI+    +  +     P+     ++  +                   
Sbjct: 4   PSLQRRTLMLIGVGIVTAALFGYVILRSGPLAPVAVTTAVVEARSISPALFGIGTVEAHF 63

Query: 56  VVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKS 115
             +I    +G + K  V+ G ++  G  L   + ++    I     +I      I T ++
Sbjct: 64  SYKIGPTIAGRVAKINVDVGERVRAGQILAEMDPVDLDARIAALDAAIGRTEASIKTAEA 123

Query: 116 ALDFLNNKYDVLEKAFESREEQLLDFLGKYH---STCSKVFNYGISSVYRSLKMKLTRMR 172
            ++    + D    A   R E+L            T  +      +++  +    L   +
Sbjct: 124 QVEDTLARKD-FALAQAKRYEELWKTRAVSEVAVETKRQDSQVADAALSAARSNLLAAQQ 182

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN 209
            +  NR D E        L+ S   D  +     E  
Sbjct: 183 DLQRNRADREGLIKQRENLILSAPVDGVIAARKAEPG 219



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/212 (10%), Positives = 66/212 (31%), Gaps = 13/212 (6%)

Query: 169 TRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
                  ++ +DL+ + + L A +   +  +   +   E     +            +  
Sbjct: 88  AGQILAEMDPVDLDARIAALDAAIGRTEASIKTAEAQVEDTLARK--------DFALAQA 139

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +  E + + + +     E   + +      L     +L   Q+      +    L K RE
Sbjct: 140 KRYEELWKTRAVSEVAVETKRQDSQVADAALSAARSNLLAAQQDLQRNRADREGLIKQRE 199

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTA 348
              + +P+ G I   +           Q +++++   K  +I ++        +++   A
Sbjct: 200 NLILSAPVDGVI-AARKAEPGTTIVAGQAVIEMI-DPKNLWINSRFDQIAATGLQQNLPA 257

Query: 349 TVRFPHYADIREKKFKAIIEKIDPIISQQDNN 380
           ++          K     + +++ +       
Sbjct: 258 SI---ALRSRAGKGVPGRVVRVEVLADAVTEE 286


>gi|160888592|ref|ZP_02069595.1| hypothetical protein BACUNI_01009 [Bacteroides uniformis ATCC 8492]
 gi|156861906|gb|EDO55337.1| hypothetical protein BACUNI_01009 [Bacteroides uniformis ATCC 8492]
          Length = 392

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 48/103 (46%), Gaps = 4/103 (3%)

Query: 57  VEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDI-ETTDLIDLKKVSIKNLRCHIDTEKS 115
           VEI+   SG I K  V+ G+ + +G  L + + + +    ++  K +++  +  ++T++ 
Sbjct: 57  VEIRPMVSGFITKLHVDEGATVRKGQVLFSIDPVQQYQAAVNSAKAAVETAKAAVNTQEL 116

Query: 116 ALD---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNY 155
            ++    LN K  + +   +  E QL     +     +++ N 
Sbjct: 117 TVNNKRELNKKNIISDYDLQMAENQLAQTKAQLAQANAQLVNA 159



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 34/113 (30%), Gaps = 5/113 (4%)

Query: 206 FEKNAV--SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY--LKE 261
             K  V  S + + Q +  V  +   +             +N   +       +   L+ 
Sbjct: 78  VRKGQVLFSIDPVQQYQAAVNSAKAAVETAKAAVNTQELTVNNKRELNKKNIISDYDLQM 137

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
               L Q +   A   ++L   +      ++ SP  G +V +  +   +    
Sbjct: 138 AENQLAQTKAQLAQANAQLVNAKNNLSYTSVTSPSDG-VVGSIPYRVGSLVSP 189


>gi|254229040|ref|ZP_04922461.1| Membrane-fusion protein [Vibrio sp. Ex25]
 gi|151938508|gb|EDN57345.1| Membrane-fusion protein [Vibrio sp. Ex25]
          Length = 268

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 62/205 (30%), Gaps = 26/205 (12%)

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
               V Q  L   +    K+   L E     K+  R + E                  ++
Sbjct: 77  ANQNVQQGQLL-IKLDDDKAQAALIEAKAYLKDEQRKLKEF-----QRLVKRNAITQTEI 130

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK 326
           +  + +     ++L   +       I +P +GT+     FS          L+ +     
Sbjct: 131 DAQKASVEIAQARLDAAQANLADLHITAPFSGTV-GFIDFSRGKMVSAGTELLTL---DD 186

Query: 327 L--TYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           L    +  +V  + +  +  G     +   + +     F   +  ID  IS +  NL   
Sbjct: 187 LSVMELDLQVPERYLSMLSIGMEVIAKTSAWGEQT---FTGQVTGIDTRISSETLNL--- 240

Query: 385 EYYEVILKITDLAFSDNNIELRNGF 409
               V ++     F +    L+ G 
Sbjct: 241 ---RVRIE-----FENPENRLKPGM 257



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 13/112 (11%), Positives = 46/112 (41%), Gaps = 5/112 (4%)

Query: 48  GEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLR 107
           G++   ++V  + S  +G + +  V+    + QG  L+  +D +    +   K  +K+ +
Sbjct: 52  GKLEAAESV-VVASEVAGKVNQIAVKANQNVQQGQLLIKLDDDKAQAALIEAKAYLKDEQ 110

Query: 108 CHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             +         L  +  + +   ++++  +     +  +  + + +  I++
Sbjct: 111 RKLK----EFQRLVKRNAITQTEIDAQKASVEIAQARLDAAQANLADLHITA 158


>gi|15676451|ref|NP_273590.1| hypothetical protein NMB0545 [Neisseria meningitidis MC58]
 gi|7225771|gb|AAF40974.1| conserved hypothetical protein [Neisseria meningitidis MC58]
 gi|325139802|gb|EGC62335.1| chromosome segregation protein SMC [Neisseria meningitidis CU385]
          Length = 1161

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 71/200 (35%), Gaps = 25/200 (12%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            +E  +         K+L   ++ ++  LD+   +  +   A +    Q      +   T
Sbjct: 204 QVEKLEKQAETAERYKSLTAQLNQQQDLLDYAQWRQSL--AAADKATAQHQSLQAQQDET 261

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            ++V      ++   +    T  +S      +L NK  +LR  ++  ++ +   +NL + 
Sbjct: 262 AAQV-----QALNDEVHALQTAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQ- 315

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                    + ER    +  +L+    EQ+ +   + E   +          E   +L +
Sbjct: 316 ---------RIERDKQAAQAQLQRIHQEQQQIRVQLEENELQVE--------EKQTELAE 358

Query: 269 NQRTFADEMSKLTILEKTRE 288
                A+   +L  LE+ + 
Sbjct: 359 WAMQVAEHEERLPELEEAQA 378


>gi|42558981|sp|Q8BSS9|LIPA2_MOUSE RecName: Full=Liprin-alpha-2; AltName: Full=Protein tyrosine
           phosphatase receptor type f polypeptide-interacting
           protein alpha-2; Short=PTPRF-interacting protein alpha-2
          Length = 1257

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 24/226 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L +  K   + +R  +      +  L  +     +   +  EQ +    K  S+    
Sbjct: 178 KSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMVSSEGST 237

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF------ 206
            +  +  +    K+   R+ +  ++  D  ++   L+ LL     ++  MK         
Sbjct: 238 ESEHLEGMEAGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQNYEMAQMKERLTALSSR 297

Query: 207 -----EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL-------------Y 248
                ++   ++ DL + E +  K   ++RE + ++++M   I  L              
Sbjct: 298 VGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSI 357

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + N +  N L      L Q +        +L + E+  +Q    +
Sbjct: 358 HDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKA 403



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 80/219 (36%), Gaps = 19/219 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E  +L++ +   +  ++  +    S +  +  + +   K     EE    +        
Sbjct: 271 VELQELLEKQNYEMAQMKERLTALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAM 330

Query: 150 SKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++       I+++ +          SI+     LEN+ +   A+L   ++     + L E
Sbjct: 331 AQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEK---NRQLQE 387

Query: 208 KNAVSQNDLNQQER---IVYKSTLELRENIHE----------QKNMLRHINELYDEANLE 254
           +  +++  L Q  R    + +   EL + I             +  +RH+    +E N E
Sbjct: 388 RLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEEKNQE 447

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                ++  +  E++ +  +D + +L      R Q  + 
Sbjct: 448 L-QRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLK 485


>gi|12667788|ref|NP_002464.1| myosin-9 [Homo sapiens]
 gi|6166599|sp|P35579|MYH9_HUMAN RecName: Full=Myosin-9; AltName: Full=Cellular myosin heavy chain,
            type A; AltName: Full=Myosin heavy chain 9; AltName:
            Full=Myosin heavy chain, non-muscle IIa; AltName:
            Full=Non-muscle myosin heavy chain A; Short=NMMHC-A;
            AltName: Full=Non-muscle myosin heavy chain IIa;
            Short=NMMHC II-a; Short=NMMHC-IIA
 gi|3169000|emb|CAB05105.1| myosin, heavy chain 9, non-muscle [Homo sapiens]
 gi|47678583|emb|CAG30412.1| MYH9 [Homo sapiens]
 gi|53791227|dbj|BAD52439.1| non-muscle myosin heavy polypeptide 9 [Homo sapiens]
 gi|109451392|emb|CAK54557.1| MYH9 [synthetic construct]
 gi|109451988|emb|CAK54856.1| MYH9 [synthetic construct]
 gi|119580500|gb|EAW60096.1| myosin, heavy polypeptide 9, non-muscle, isoform CRA_a [Homo sapiens]
 gi|119580502|gb|EAW60098.1| myosin, heavy polypeptide 9, non-muscle, isoform CRA_a [Homo sapiens]
 gi|152012654|gb|AAI50170.1| Myosin, heavy chain 9, non-muscle [synthetic construct]
 gi|152012993|gb|AAI50171.1| Myosin, heavy chain 9, non-muscle [synthetic construct]
 gi|166788562|dbj|BAG06729.1| MYH9 variant protein [Homo sapiens]
 gi|168270842|dbj|BAG10214.1| myosin-9 [synthetic construct]
          Length = 1960

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 5/199 (2%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     ++ E+  L+  N K    +K  E R  +    L +     SK
Sbjct: 958  ARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTE-EEEKSK 1016

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +     +     R+R     R +LE     L    +     +     L  + A 
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIA---ELQAQIAE 1073

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
             +  L ++E  +  +   + E   ++   L+ I EL  +   E    L+       + ++
Sbjct: 1074 LKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELESQI-SELQEDLESERASRNKAEK 1132

Query: 272  TFADEMSKLTILEKTREQK 290
               D   +L  L+   E  
Sbjct: 1133 QKRDLGEELEALKTELEDT 1151



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 68/209 (32%), Gaps = 5/209 (2%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +D   +   +      K     + + ++ +  L  +    E+A    +++  +   + 
Sbjct: 1653 ELDDTRASR--EEILAQAKENEKKLKSMEAEMIQLQEELAAAERAKRQAQQERDELADEI 1710

Query: 146  HSTCSK--VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
             ++  K  +       +   +      +     N   + ++       +     DL + +
Sbjct: 1711 ANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKANLQIDQINTDLNLER 1770

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENI-HEQKNMLRHINELYDEANLEFANYLKEI 262
            +  +KN  ++  L +Q + +     E+   +  + K  +  +     +   +  N  KE 
Sbjct: 1771 SHAQKNENARQQLERQNKELKVKLQEMEGTVKSKYKASITALEAKIAQLEEQLDNETKER 1830

Query: 263  SRDLEQNQRTFADEMSKLTILEKTREQKT 291
                +Q +RT       L  ++  R    
Sbjct: 1831 QAACKQVRRTEKKLKDVLLQVDDERRNAE 1859



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 70/225 (31%), Gaps = 37/225 (16%)

Query: 101  VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYH-------------- 146
               + LR  +  +K  L+ + +  +   +  E R + L     K                
Sbjct: 897  AEAEELRARLTAKKQELEEICHDLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEE 956

Query: 147  --------------------STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
                                     +       + +  K+   R+     N  + E KS 
Sbjct: 957  SARQKLQLEKVTTEAKLKKLEEEQIILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSK 1016

Query: 187  LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
             L  L + H+  +T ++    +    + +L +  R +   + +L + I E +  +  +  
Sbjct: 1017 SLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKM 1076

Query: 247  LYDEANLEFANYLKEISRDLEQ---NQRTFADEMSKLTILEKTRE 288
               +   E    L  +  +  Q     +   +  S+++ L++  E
Sbjct: 1077 QLAKKEEELQAALARVEEEAAQKNMALKKIRELESQISELQEDLE 1121



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/197 (11%), Positives = 66/197 (33%), Gaps = 8/197 (4%)

Query: 102  SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
            S+  L       +  ++ +  + + LE   ++ E+  L       +  ++          
Sbjct: 1519 SVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDE 1578

Query: 162  RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF-------EKNAVSQN 214
            +S + K   +R +     +LE++       +++ +K    +K+L        +    +  
Sbjct: 1579 QSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEAIK 1638

Query: 215  DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFA 274
             L + +  +     EL +    ++ +L    E   +     A  + ++  +L   +R   
Sbjct: 1639 QLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMI-QLQEELAAAERAKR 1697

Query: 275  DEMSKLTILEKTREQKT 291
                +   L       +
Sbjct: 1698 QAQQERDELADEIANSS 1714



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 69/211 (32%), Gaps = 12/211 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK- 151
               ++ ++   ++L+      +  +  L  + +  E A +  + + +    K      + 
Sbjct: 921  EARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLEEEQ 980

Query: 152  -VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             +       + +  K+   R+     N  + E KS  L  L + H+  +T ++    +  
Sbjct: 981  IILEDQNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNKHEAMITDLEERLRREE 1040

Query: 211  VSQNDLNQQER-------IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE-- 261
              + +L +  R        +     EL+  I E K  L    E    A         +  
Sbjct: 1041 KQRQELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKN 1100

Query: 262  -ISRDLEQNQRTFADEMSKLTILEKTREQKT 291
               + + + +   ++    L     +R +  
Sbjct: 1101 MALKKIRELESQISELQEDLESERASRNKAE 1131



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 75/235 (31%), Gaps = 29/235 (12%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D ++ +        ++ +   ++ E+            LE   +  E  +          
Sbjct: 1577 DEQSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEA 1636

Query: 149  CSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK--- 203
              ++      +    R L         I     + E K   + A +   Q++L   +   
Sbjct: 1637 IKQLRKLQAQMKDCMRELDDTRASREEILAQAKENEKKLKSMEAEMIQLQEELAAAERAK 1696

Query: 204  --------NLFE-------KNAVSQNDLNQQERIVYKSTLELRENIH-------EQKNML 241
                     L +       K A++  +  + E  + +   EL E            K   
Sbjct: 1697 RQAQQERDELADEIANSSGKGALALEEKRRLEARIAQLEEELEEEQGNTELINDRLKKAN 1756

Query: 242  RHINELYDEANLEFANYLK--EISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              I+++  + NLE ++  K     + LE+  +    ++ ++    K++ + +I +
Sbjct: 1757 LQIDQINTDLNLERSHAQKNENARQQLERQNKELKVKLQEMEGTVKSKYKASITA 1811



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 73/210 (34%), Gaps = 12/210 (5%)

Query: 93   TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             +  D  +   +       +   AL+    +   LE+  +    ++ D +         V
Sbjct: 1461 AEERDRAEAEAREKETKALSLARALEEAMEQKAELERLNKQFRTEMEDLMSSKDDVGKSV 1520

Query: 153  --FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                    ++ + ++   T++  +       E+    L   L + +      ++L  ++ 
Sbjct: 1521 HELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFE--RDLQGRDE 1578

Query: 211  VSQNDLNQQERIVYKSTLEL-----RENIHEQKNMLRHINELYDEANLEFANY-LKEISR 264
             S+    Q  R V +   EL     + ++         ++    EA+++ AN    E  +
Sbjct: 1579 QSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDSANKNRDEAIK 1638

Query: 265  DLEQNQRTFADEMSKLTILEKTREQKTILS 294
             L + Q    D M +L   +    ++ IL+
Sbjct: 1639 QLRKLQAQMKDCMRELD--DTRASREEILA 1666


>gi|88860751|ref|ZP_01135388.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           tunicata D2]
 gi|88817346|gb|EAR27164.1| efflux transporter, RND family, MFP subunit [Pseudoalteromonas
           tunicata D2]
          Length = 414

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 64/204 (31%), Gaps = 26/204 (12%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
                 L  E K   L A + S   D+   + L E    ++ DL + E            
Sbjct: 130 RQQNELLAEEGKQEDLIADIESLMLDVEANRKLAELGIAAKIDLERSELK---------- 179

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
                   L  +N+  +      A+++K    + +Q       E   +  L       TI
Sbjct: 180 --------LAQLNKQLERNRFRLASFIKMQQLEKQQQHMRLVAEQQSVANLAAKMAALTI 231

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            + IAGT+          Y    Q L K V  S     + ++  +  + V+      ++ 
Sbjct: 232 KAGIAGTLEKLDI-ELGQYVNAGQTLAK-VGSSTDLIAKIRIPQRLAEKVQLDAKVNIK- 288

Query: 353 PHYADIREKKFKAIIEKIDPIISQ 376
                 ++      I ++  +I  
Sbjct: 289 -----SKDSILSGKISQLSSVIRD 307


>gi|148254295|ref|YP_001238880.1| putative RND efflux membrane fusion protein [Bradyrhizobium sp.
           BTAi1]
 gi|146406468|gb|ABQ34974.1| putative RND efflux membrane fusion protein precursor
           [Bradyrhizobium sp. BTAi1]
          Length = 396

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 57/171 (33%), Gaps = 16/171 (9%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + +L  +   + A+        ++Q Q  +    + +   E    QK + +P  G
Sbjct: 136 KAQVTVAQLSLDRAKQLASRQFGPQATVDQAQAAYDQAQAGIAKTEALIAQKLVRAPFDG 195

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADI 358
             +  +      Y      ++ +       ++   VT K    +K G T  V    Y   
Sbjct: 196 D-LGVRKVEVGQYLSAGTQIVSLT-DLSELWVNFTVTEKDSGQLKVGQTVRVGVDAYP-- 251

Query: 359 REKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
             K F+  I  I+P I+    N++ Q              ++ +  L+ G 
Sbjct: 252 -GKVFEGKITTIEPQIATDTRNIRVQ-----------ATIANPDHILKPGM 290



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 65/207 (31%), Gaps = 26/207 (12%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITW----------SILL-----PIEIS-VSSSGEI 50
           K  KR  P     +  + +  ++G   W                   PI +S  +++ E+
Sbjct: 17  KPRKRTRPVLWFTIVAILLAALVGGFVWFNMFRDKMIAQFFANMKPPPINVSMATATAEV 76

Query: 51  LNED----------NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           +             + V + S  SG I       G+ + QGTPL+   D      +   K
Sbjct: 77  VPNLLTAVGDLAAVHQVNVTSDASGRITDIMFTPGTTVKQGTPLVQLYDAPEQGDLANFK 136

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             +   +  +D  K            +++A  + ++              K+        
Sbjct: 137 AQVTVAQLSLDRAKQLASRQFGPQATVDQAQAAYDQAQAGIAKTEALIAQKLVRAPFDGD 196

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSL 187
               K+++ +  S     + L + S L
Sbjct: 197 LGVRKVEVGQYLSAGTQIVSLTDLSEL 223


>gi|325579137|ref|ZP_08149093.1| acriflavin resistance protein A [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159372|gb|EGC71506.1| acriflavin resistance protein A [Haemophilus parainfluenzae ATCC
           33392]
          Length = 398

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 78/222 (35%), Gaps = 22/222 (9%)

Query: 189 RALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           +  + S Q   T+ K L +   +V + DL     +   S++E       Q  ++      
Sbjct: 80  QGAMLSAQSAGTVSKVLVQNGQSVKKGDLL----VELDSSVEHASLQAAQAQVVSLRQTY 135

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
              ANL  +  +    ++L+  +  +  + + +  L+ T E++ I++P  G     +   
Sbjct: 136 QRYANLAGSGAVS--RQELDNAKSAYEAQAANIESLKATIERRQIVAPFDGKAGIVKVN- 192

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Y      +++ V       +   +    +  +  G   T         + + F A +
Sbjct: 193 VGQYVSNGTEIVR-VEDRSSMKVDFAIAQNLLDKLHIGQKVTA--TA-DARKGETFAAKV 248

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
             I+P I+              ++ +      ++  +L +G 
Sbjct: 249 TAIEPAINSSTG----------LVDVQATFEPEDGAKLLSGM 280



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 53/149 (35%), Gaps = 8/149 (5%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G + K  V+NG  + +G  L+  +       +   +  + +LR       +         
Sbjct: 90  GTVSKVLVQNGQSVKKGDLLVELDSSVEHASLQAAQAQVVSLRQTYQRYANLAGSGAVSR 149

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             L+ A  + E Q  +      +   +            +K+ + +  S     + +E++
Sbjct: 150 QELDNAKSAYEAQAANIESLKATIERRQIVAPFDGKAGIVKVNVGQYVSNGTEIVRVEDR 209

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
           SS+        + D  + +NL +K  + Q
Sbjct: 210 SSM--------KVDFAIAQNLLDKLHIGQ 230


>gi|313203364|ref|YP_004042021.1| secretion protein hlyd family protein [Paludibacter propionicigenes
           WB4]
 gi|312442680|gb|ADQ79036.1| secretion protein HlyD family protein [Paludibacter propionicigenes
           WB4]
          Length = 330

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 68/232 (29%), Gaps = 33/232 (14%)

Query: 186 SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN 245
              +  +   +K    ++ LF+K  V+    ++ E     +         +         
Sbjct: 119 QKAQVGVDIAKKSFDRVQRLFDKGVVTAQKRDEAEAQYKAAVATASAAKSQYDMAKNGAE 178

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +   EA L   +  K    +++   +                   T+ SPI G I     
Sbjct: 179 KEDKEAALALVDRAKGAVNEVKSYLKEI-----------------TLTSPINGEITDI-Y 220

Query: 306 FSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKA 365
                      P+M IV  +   +    V    +  +K   T  V+ P   +      + 
Sbjct: 221 PKRGELVGAGAPIMSIVDLND-IWFTFNVREDLLGGLKMDKTFKVKVPALNNKI---VEV 276

Query: 366 IIEKIDPIISQQD--NNLQTQEY----YEVILKITDLAFSDNNIELRNGFPA 411
            +  I  + S         T ++    +EV  + T         +LR G  A
Sbjct: 277 KVTYIKALASYATWKATKTTGQFDVKTFEVRARPTAKVA-----DLRPGMTA 323


>gi|332839943|ref|XP_003313878.1| PREDICTED: liprin-alpha-2 isoform 1 [Pan troglodytes]
 gi|221042944|dbj|BAH13149.1| unnamed protein product [Homo sapiens]
          Length = 1156

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 24/226 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L +  K   + +R  +      +  L  +     +   +  EQ +    K  S+    
Sbjct: 104 KSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGST 163

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF------ 206
            +  +  +    K+   R+ +  ++  D  ++   L+ LL     ++  MK         
Sbjct: 164 ESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQNYEMAQMKERLAALSSR 223

Query: 207 -----EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL-------------Y 248
                ++   ++ DL + E +  K   ++RE + ++++M   I  L              
Sbjct: 224 VGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSI 283

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + N +  N L      L Q +        +L + E+  +Q    +
Sbjct: 284 HDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKA 329



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 80/219 (36%), Gaps = 19/219 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E  +L++ +   +  ++  +    S +  +  + +   K     EE    +        
Sbjct: 197 VELQELLEKQNYEMAQMKERLAALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAM 256

Query: 150 SKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++       I+++ +          SI+     LEN+ +   A+L   ++     + L E
Sbjct: 257 AQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEK---NRQLQE 313

Query: 208 KNAVSQNDLNQQER---IVYKSTLELRENIHE----------QKNMLRHINELYDEANLE 254
           +  +++  L Q  R    + +   EL + I             +  +RH+    +E N E
Sbjct: 314 RLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEEKNQE 373

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                ++  +  E++ +  +D + +L      R Q  + 
Sbjct: 374 L-QRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLK 411


>gi|221236154|ref|YP_002518591.1| periplasmic multidrug efflux lipoprotein [Caulobacter crescentus
           NA1000]
 gi|220965327|gb|ACL96683.1| periplasmic multidrug efflux lipoprotein precursor [Caulobacter
           crescentus NA1000]
          Length = 358

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 73/221 (33%), Gaps = 25/221 (11%)

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN----QR 271
           +    +I    ++   + I           +   +A+LE      E  + L +     ++
Sbjct: 75  VLTTMKIEAGDSVRAGQLIAAIDPAGVDARQQQTQADLERVRRDLERDKVLFEKGYVSRQ 134

Query: 272 TFADEMSKLTILE-------KTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
              D  S L   +         R    ++SP++G ++  ++ +        Q + ++   
Sbjct: 135 RIDDRTSALKAAQAAYDAAHFDRRWANLVSPVSGVVLERRAQA-GEVVGAGQVVARVADL 193

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ 384
           +    +R  +  +    ++ G  ATV+     +I E      + ++      +   +  +
Sbjct: 194 TSPLVLRLPLAARDAARIRVGDPATVKV---DEIGETALNGRVTRVGEAADARTGAVLVE 250

Query: 385 EYYEV---ILKITDLAFSDNNIELRNG-------FPAEVLF 415
                    L+   +A +  N+    G        PAE + 
Sbjct: 251 IELSAPPSTLRSGQVAHATLNVRAAPGVTTTYARVPAEAVL 291



 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/139 (8%), Positives = 43/139 (30%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++   ++E G  +  G  +   +           +  ++ +R  ++ +K   +      
Sbjct: 74  GVLTTMKIEAGDSVRAGQLIAAIDPAGVDARQQQTQADLERVRRDLERDKVLFEKGYVSR 133

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             ++    + +     +   +           +S V    + +   +         + + 
Sbjct: 134 QRIDDRTSALKAAQAAYDAAHFDRRWANLVSPVSGVVLERRAQAGEVVGAGQVVARVADL 193

Query: 185 SSLLRALLSSHQKDLTMMK 203
           +S L   L    +D   ++
Sbjct: 194 TSPLVLRLPLAARDAARIR 212


>gi|7266951|gb|AAD05492.2| kinesin superfamily motor KIF4 [Homo sapiens]
          Length = 1232

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 63/186 (33%), Gaps = 8/186 (4%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             + I+     ++K+  ++ +    + E+  L+    K D  +     R  + L  L   
Sbjct: 549 QLQPIQYQYQDNIKEPELEVINLQKEKEELVLELQTAKKDANQAKLSERRRKRLQELEGQ 608

Query: 146 HSTCSKVFNYG------ISSVYRSLKMKLTRMRSIYLNRLDLENK-SSLLRALLSSHQKD 198
            +   K  N          S  R++      +R +   R+ L  +            QK 
Sbjct: 609 IADLKKKLNEQSKLLKLKESTERTVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKR 668

Query: 199 LTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANY 258
              +  L E++   Q +L + ER   K +  LR    E     + + +   +   E A+ 
Sbjct: 669 DKEVIQLKERDRKRQYELLKLERNFQKQSNVLRRKTEEAAAANKRLKDALQKQR-EVADK 727

Query: 259 LKEISR 264
            KE   
Sbjct: 728 RKETQS 733


>gi|27366454|ref|NP_761982.1| Multidrug resistance efflux pump [Vibrio vulnificus CMCP6]
 gi|27362655|gb|AAO11509.1| Multidrug resistance efflux pump [Vibrio vulnificus CMCP6]
          Length = 409

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 97/305 (31%), Gaps = 41/305 (13%)

Query: 135 EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSS 194
           + Q+++          + ++  + +    L++    + +        + +     A  ++
Sbjct: 118 DNQIVNAGDLLFRIDPRNYDIALRAAQAELELVGQSIGANTAAVEVAQARVVEALAARNN 177

Query: 195 HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
            ++     + L ++  +S+ DL+       ++   L           +++    +     
Sbjct: 178 AREQAARTETLAKRGVLSKADLDNALESKTRAQAGLEAAEAALVQAKQNLGPAGN----- 232

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
                         N       M+KL   +   ++  + +P  G +   Q  ++   A  
Sbjct: 233 --------------NNPQILAAMAKLEKAQLDLQKTNVTAPSKGVLTNVQL-TNGQRANA 277

Query: 315 SQPLMK-IVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKI--- 370
             PL+  I P     +I A++    ++H+++G    +                I+ I   
Sbjct: 278 GTPLLTFIDPRG--VWISAQLRENSLEHIREGQRVDIVLDALPGR---VLSGKIDSIGWG 332

Query: 371 -------DPII--SQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTAKNTT 421
                  D        DN   + + Y V +   D+    N   +R G  A V    + + 
Sbjct: 333 TGGSNNVDATTGFLVADNKAISAQRYPVNIVFDDVERLSN---VRFGSQATVAVYTEKSK 389

Query: 422 LAQEI 426
             + +
Sbjct: 390 FGEWL 394



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 77/227 (33%), Gaps = 11/227 (4%)

Query: 9   LKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIK 68
           L  +  +S +++++  I  I+ +  +S+    +     +        +V+I    +G I 
Sbjct: 55  LMSDTQSSSRKLSIYIITTILVIWLYSLWA--DRVTPITSSARIHSYLVQIAPEVTGNII 112

Query: 69  KFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK-YDVL 127
              V +   +  G  L   +       +   +  ++ +   I    +A++    +  + L
Sbjct: 113 DVSVSDNQIVNAGDLLFRIDPRNYDIALRAAQAELELVGQSIGANTAAVEVAQARVVEAL 172

Query: 128 EKAFESREEQL-LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL----E 182
                +RE+    + L K         +  + S  R+         ++   + +L     
Sbjct: 173 AARNNAREQAARTETLAKRGVLSKADLDNALESKTRAQAGLEAAEAALVQAKQNLGPAGN 232

Query: 183 NKSSLLRALLSSHQKDLTMMKNLF---EKNAVSQNDLNQQERIVYKS 226
           N   +L A+    +  L + K       K  ++   L   +R    +
Sbjct: 233 NNPQILAAMAKLEKAQLDLQKTNVTAPSKGVLTNVQLTNGQRANAGT 279


>gi|90423161|ref|YP_531531.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
 gi|90105175|gb|ABD87212.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18]
          Length = 397

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 57/173 (32%), Gaps = 20/173 (11%)

Query: 239 NMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAG 298
                + +L  +   + A         ++  Q  F    + +   E    QK + +P  G
Sbjct: 137 KAQATVAQLSLDRAKQLAARQFGPQATVDSAQAAFDQANAGIAKTEAIISQKLVRAPFDG 196

Query: 299 TIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAK--VTPKQIQHVKKGYTATVRFPHYA 356
            ++  +      +        +IV  + L+ + A   VT K    +K G    V    Y 
Sbjct: 197 -VLGVRHAEVGQFLTAGT---QIVTLTDLSAVYANFTVTEKDSGTLKVGQVVRVAVDAYP 252

Query: 357 DIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
               K F+  I  I+P I+    N++ Q               + +  L+ G 
Sbjct: 253 ---GKVFEGKITTIEPQINTDTRNIRVQ-----------ATIQNPDHILKPGM 291



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 35/122 (28%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I       G+ +  G+PL+   D      +   K      +  +D  K          
Sbjct: 102 GRITDIMFTAGAVVKAGSPLVQLFDEPDRADLASFKAQATVAQLSLDRAKQLAARQFGPQ 161

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             ++ A  + ++              K+       V      ++ +  +     + L + 
Sbjct: 162 ATVDSAQAAFDQANAGIAKTEAIISQKLVRAPFDGVLGVRHAEVGQFLTAGTQIVTLTDL 221

Query: 185 SS 186
           S+
Sbjct: 222 SA 223


>gi|293412609|ref|ZP_06655332.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291469380|gb|EFF11871.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 310

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 22/188 (11%)

Query: 204 NLFEKNAVS--------QNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLE 254
            L +K  V         Q  L + +  V    +  +E   E     R  +  +  E   +
Sbjct: 67  QLVKKGQVLFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQ 126

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQ 314
             N L+ +   L + Q T         + +   E+  I +P  G +     ++   +  +
Sbjct: 127 ANNVLQTVLHQLAKAQATR-------DLAKLDLERTVIRAPADGWVTNLNVYT-GEFITR 178

Query: 315 SQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPII 374
               + +V  +   Y+ A +   +++ V+ GY A +          K  K  ++ +   +
Sbjct: 179 GSTAVALVKQNS-FYVLAYMEETKLEGVRPGYRAEIT----PLGSNKVLKGTVDSVAAGV 233

Query: 375 SQQDNNLQ 382
           +   +   
Sbjct: 234 TNASSTRD 241



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    +   + L+ +  I     W            + +     +VV I    SG+
Sbjct: 2   KTLIRKFSRTAITVVLVILAFIAIFNAWVYYTE----SPWTRDARFSADVVAIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V +   + +G  L T +       ++  +  +   +  +  EK       N+  V
Sbjct: 58  ITQVNVHDNQLVKKGQVLFTIDQPRYQKALEEAQADVAYYQV-LAQEKRQEAGRRNRLGV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVLHQLAKAQATRDLAKL 150


>gi|264679643|ref|YP_003279550.1| efflux transporter RND family, MFP subunit [Comamonas testosteroni
           CNB-2]
 gi|262210156|gb|ACY34254.1| efflux transporter, RND family, MFP subunit [Comamonas testosteroni
           CNB-2]
          Length = 606

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/234 (10%), Positives = 71/234 (30%), Gaps = 18/234 (7%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
            +++  SG + K   + G ++  G  L   +       +   + S+   +  +   +  L
Sbjct: 136 VVRAKVSGELLKLHFKEGDEVKAGQLLAEIDPRSFAASLAQVQGSLARDQAQLKNAQLDL 195

Query: 118 D---FLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI 174
                L  +  +  +  +++   +    G   +   +V    +   Y  +   ++    +
Sbjct: 196 QRYKELQAQDSIARQQVDTQAALVRQLQGTVAADQGQVDAAKLQLSYTRITAPISGRLGL 255

Query: 175 YLNRLD------------LENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI 222
               L               ++   + A+ S  +  +  +     +  +   +L  +E+ 
Sbjct: 256 RQADLGNVVNPSDTNGLVTISQIRPIDAVFSIPETHVGTLAQQLREGKLMPVELWDREQK 315

Query: 223 VYKSTLELRE---NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTF 273
              +  +L      I      ++      +     FAN    +   L Q  +  
Sbjct: 316 QMLAKGQLNALDNTIDTTTGTVKAKASFDNAERKLFANQFVNVKLQLRQIDQAL 369


>gi|257464698|ref|ZP_05629069.1| putative RND efflux membrane fusion protein [Actinobacillus minor
           202]
 gi|257450358|gb|EEV24401.1| putative RND efflux membrane fusion protein [Actinobacillus minor
           202]
          Length = 402

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 75/234 (32%), Gaps = 25/234 (10%)

Query: 189 RALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL 247
           +  + S +   T+ + L      V++ DL   E         L+ +  +        +  
Sbjct: 79  QGAMLSAEASGTVSRVLVSSGQRVNKGDLL-VEFDSAVEVANLKASEAQLPAAKASYDRY 137

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFS 307
            +      A+       +L+  + T+   ++ +  L  T  ++ + +P +G I    + +
Sbjct: 138 RNLVASNSAS-----QAELDNAKATYNQLVANIESLRSTIGRRKVYAPFSG-IAGIVNVN 191

Query: 308 SSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAII 367
              Y      +++ V       IR  +    I+ +  G    V            F A I
Sbjct: 192 VGQYISTGTEIVR-VEDQSSMKIRFTLPQTDIEKINVGQRVKVEIDALPGQT---FSARI 247

Query: 368 EKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPA--EVLFTAKN 419
             IDP + +    +             +    D+  +L +G  A   V    + 
Sbjct: 248 AAIDPAVDRLTGLINL-----------EAVIEDSQNKLLSGMFARLSVELPTEE 290



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/124 (12%), Positives = 48/124 (38%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG + +  V +G ++ +G  L+ F+       +   +  +   +   D  ++ +   +  
Sbjct: 88  SGTVSRVLVSSGQRVNKGDLLVEFDSAVEVANLKASEAQLPAAKASYDRYRNLVASNSAS 147

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
              L+ A  +  + + +      +   +      S +   + + + +  S     + +E+
Sbjct: 148 QAELDNAKATYNQLVANIESLRSTIGRRKVYAPFSGIAGIVNVNVGQYISTGTEIVRVED 207

Query: 184 KSSL 187
           +SS+
Sbjct: 208 QSSM 211


>gi|121535014|ref|ZP_01666832.1| efflux transporter, RND family, MFP subunit [Thermosinus
           carboxydivorans Nor1]
 gi|121306427|gb|EAX47351.1| efflux transporter, RND family, MFP subunit [Thermosinus
           carboxydivorans Nor1]
          Length = 421

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 57/172 (33%), Gaps = 18/172 (10%)

Query: 254 EFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQ 313
           +  N L + +R   +     A ++  +    +      + +   GT++  Q      Y  
Sbjct: 159 QMNNQLLQAARRKLELLGVPAQDIEHIAHTRQPNTHMAVRAQFGGTVLEKQVL-LGAYIM 217

Query: 314 QSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPI 373
             + L   V      ++   +  K + +V+ G T TV  P Y       F  ++  I+P+
Sbjct: 218 PGEKL-YAVSDLSSVWLYVDLYEKDVANVQVGQTVTVTTPAYPGET---FTGVVSFINPV 273

Query: 374 ISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFTA--KNTTLA 423
           +              V +++     ++   +L+    A          T + 
Sbjct: 274 LDDATRT--------VKVRV---EMANPAGKLKPNMFANATIKVPLGETVVI 314


>gi|1835241|emb|CAA55235.1| fcrA8 [Streptococcus pyogenes]
          Length = 384

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 76/206 (36%), Gaps = 6/206 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +   L    ++  +     ++ +   +  L N+   L++A E   + + +   +  +   
Sbjct: 89  KIAALKSEAELKNQQALEALNNKNEQIAKLTNENAQLKEAIEGYVQTIQNASREMAAKQQ 148

Query: 151 KVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
           ++      + +    +     +  S       L+++ + L  LL S +++LT ++   + 
Sbjct: 149 ELAAAKSQLEAKNAEIDALKQQDASKTEEIAKLQSEVATLENLLGSAKRELTDLQAKLDT 208

Query: 209 NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
               +  L  Q   +       +  + + +  L   N   ++   + A     + + LE 
Sbjct: 209 ATAEKAKLESQVTTLENLLGSAKRELTDLQAKLDAANAEKEKLQSQAAA----LEKQLEA 264

Query: 269 NQRTFADEMSKLTILEKTREQKTILS 294
            ++  AD  +KL    + +E+    +
Sbjct: 265 TKKELADLQAKLAATNQEKEKLEAEA 290


>gi|32470714|ref|NP_863707.1| hypothetical protein RB85 [Rhodopirellula baltica SH 1]
 gi|32442859|emb|CAD71378.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 410

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 72/234 (30%), Gaps = 8/234 (3%)

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           IKK     G++I +G  ++ F+       +   +  I+  R     E+ A D      ++
Sbjct: 70  IKKILPH-GTEIKEGQTVIWFDTESIDKKLSDAENDIRLARIDAADEQFAFDQFVASQEL 128

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS 186
             +  E   +        Y        +  I S    L+M    + +       L+    
Sbjct: 129 DRQDAERARQSAKQTYDNYLQVDR---DRKIKSAEFDLEMSKASLENAAEELKQLQQMYD 185

Query: 187 LLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE-RIVYKSTLELRENIHEQKNMLRHIN 245
                  S +  L   K   E    +Q  L   E R        +     + +       
Sbjct: 186 ADDLTEESEEIVLKRAKRAVES---AQFRLESTEIRSKRTLEQSIPAEDAQTEATWERAQ 242

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
             Y++      +  K+   +  +  +  A++ S    L + R+   I SP  G 
Sbjct: 243 MTYEKTIRNLDSAKKKRDLERRKAAKALAEKESDFEELRQQRKAIVIKSPGNGI 296


>gi|285018548|ref|YP_003376259.1| hemolysin D [Xanthomonas albilineans GPE PC73]
 gi|283473766|emb|CBA16269.1| putative secretion_protein_hlyd_single_hybrid_motif [Xanthomonas
           albilineans]
          Length = 302

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 73/181 (40%), Gaps = 11/181 (6%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQK-DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLE 229
           +R + ++  D   + +LL A        +L + +   +  A     L Q+   V +    
Sbjct: 61  LREVAVHEGDAVQRGALLVAADDRAAAVELDIARTHAQAAATHLRQLQQRLAHVQQRQRR 120

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
           L E           +    +++  + ++ ++ +  +L+  +   A   +++   E  R Q
Sbjct: 121 LAEA--------ARLGAGDEQSADDASDAVQSLDDELQNARSDAALADAQVRAAELQRAQ 172

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             + +P+AG ++   + +    ++ + PL+ ++P      +RA++       V  G  A 
Sbjct: 173 YQLYAPVAGRVLQLSA-AVGARSEANTPLLTLLP-DAPRLVRAELNESYAGSVAPGMNAE 230

Query: 350 V 350
           V
Sbjct: 231 V 231



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 52/139 (37%), Gaps = 2/139 (1%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
             + G I  E  V+++  P +  +++  V  G  + +G  L+  +D      +D+ +   
Sbjct: 38  AVARGRIDVEGGVLKLGLPVTAPLREVAVHEGDAVQRGALLVAADDRAAAVELDIARTHA 97

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +    H+   +  L  +  +   L +A  +R     +      S   +  +  + +    
Sbjct: 98  QAAATHLRQLQQRLAHVQQRQRRLAEA--ARLGAGDEQSADDASDAVQSLDDELQNARSD 155

Query: 164 LKMKLTRMRSIYLNRLDLE 182
             +   ++R+  L R   +
Sbjct: 156 AALADAQVRAAELQRAQYQ 174


>gi|149374338|ref|ZP_01892112.1| cation efflux family protein [Marinobacter algicola DG893]
 gi|149361041|gb|EDM49491.1| cation efflux family protein [Marinobacter algicola DG893]
          Length = 394

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 53/141 (37%), Gaps = 2/141 (1%)

Query: 41  EISVSSSGEI-LNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  V++  E+    D V ++     G + +  V+ G Q+ +G  L     +E    I  +
Sbjct: 72  DNIVTAPAEVHYVPDRVADVGPLLQGKLTRLAVDLGDQVEKGQLLAALNSVEL-ARIRSR 130

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISS 159
             S+   +     E      L ++    E+ F   +   L+   +Y S   ++  +G  S
Sbjct: 131 LNSLNARKEAATAEYQREKQLRSESFTSEEEFLDAKAAYLEITAEYDSIREQLEVFGSDS 190

Query: 160 VYRSLKMKLTRMRSIYLNRLD 180
                 +    +RS    R++
Sbjct: 191 SGSDSSLAQYALRSPIQGRIE 211



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 75/242 (30%), Gaps = 30/242 (12%)

Query: 181 LENKSSLLRALLSSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLELRENIHEQKN 239
           L+ K + L   L    +   ++  L        ++ LN        +T E +      + 
Sbjct: 95  LQGKLTRLAVDLGDQVEKGQLLAALNSVELARIRSRLNSLNARKEAATAEYQR-----EK 149

Query: 240 MLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGT 299
            LR  +   +E  L+      EI+ + +  +       S  +  + +  Q  + SPI G 
Sbjct: 150 QLRSESFTSEEEFLDAKAAYLEITAEYDSIREQLEVFGSDSSGSDSSLAQYALRSPIQGR 209

Query: 300 IVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIR 359
           I    +         S      V  + + ++  +V    I  V  G    V    ++   
Sbjct: 210 IERMDAR-LGQTLSSSDTPFT-VADTSVVWVMLQVAETDIGRVSVGDEVQV----FSKSV 263

Query: 360 EKKF-KAIIEKIDPIISQQDN-------------NLQTQEYYEVILKITDLAFSDNNIEL 405
             +F    +  I   + ++               +L+   Y +  +     A    ++ L
Sbjct: 264 ADRFHTGEVSWISNELDEETRTIPVRVVLESPNGDLRPNTYAKARVMTQSAA----SLPL 319

Query: 406 RN 407
             
Sbjct: 320 VP 321


>gi|126722647|ref|NP_001075625.1| huntingtin-interacting protein 1-related protein [Oryctolagus
           cuniculus]
 gi|32699406|gb|AAP86641.1| huntingtin interacting protein 1-related [Oryctolagus cuniculus]
          Length = 1068

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 72/207 (34%), Gaps = 5/207 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
              ++  K+  +     +  + +AL+    +    ++      EQL   L +  +   + 
Sbjct: 367 RSELEKMKLEAQRYVAQLKGQVNALEAELEEQRKQKQKALVDNEQLRHELAQLRAAQQEA 426

Query: 153 FNYGISSVYRSLKMKLTRMR--SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                       K   T +R   +      L N  + L    +   K LT+ +   E+ A
Sbjct: 427 ERSQGLREEAERKASATELRYQKLKEKHSALINTHAELLRKNADTAKQLTVTQQSQEEGA 486

Query: 211 VSQNDLN-QQERIVYKSTLELRENIHEQKNMLRHINELYDEAN--LEFANYLKEISRDLE 267
             +  L  Q E++  +S ++L E   + + + R +     E     E  +  ++   +L 
Sbjct: 487 RVKEQLAFQVEQVRRESEMKLEEQSDQVEQLQRELQAKTRELRHVQEALSRTEQSGSELS 546

Query: 268 QNQRTFADEMSKLTILEKTREQKTILS 294
                 + E   L+   + RE   + +
Sbjct: 547 SRLDALSAEKDALSGAVRQREADLLAA 573


>gi|159893|gb|AAA29420.1| Major body wall myosin [Onchocerca volvulus]
          Length = 1957

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 69/206 (33%), Gaps = 17/206 (8%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            E    +  K+   + +   ++ E+  +  L  K  V E      E +      +   + +
Sbjct: 1082 EIESNLKKKETEAQAITARLEEEQDLVGKL--KKQVNETQNRITELEEELENERQSRSKA 1139

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            +     +      L  +L         ++++  K            +   + ++L E N 
Sbjct: 1140 ERAKSDLQRELEELGDRLDEQGGATAAQVEVNKKREA---------ELAKLRRDLEEANM 1190

Query: 211  VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
              +N L    +    +  EL + I + +     I +   +A  E  + + +I  +  +  
Sbjct: 1191 NHENQLAAIRKKHNDAVAELGDQIEQVQKAKAKIEKDKMQAQRERQDLVAQIDGETAERM 1250

Query: 271  ------RTFADEMSKLTILEKTREQK 290
                  + +  ++++L      + ++
Sbjct: 1251 NNEKLAKQYEMQIAELQTKCDEQNRQ 1276



 Score = 43.9 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 51/140 (36%), Gaps = 3/140 (2%)

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQN 214
             I  + + +K     + +    R +LE  S+ L    ++   +L   K          N
Sbjct: 854 EEIEKMNQQIKQLEENIANEEKARKELEANSTKLLEERNNVFNELEAAKAQLSDVDDRLN 913

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK---EISRDLEQNQR 271
            L+  +  V K   EL E + +Q++    ++    +   +  N  K   E+   L++   
Sbjct: 914 RLSTLKTDVEKQIHELEERLGDQEDRNSDLSRSKKKIENDVENLKKSIAELETRLQKTDA 973

Query: 272 TFADEMSKLTILEKTREQKT 291
                  ++  L+   +Q+ 
Sbjct: 974 DKQSREQQIRTLQDEMQQQD 993



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 81/226 (35%), Gaps = 23/226 (10%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +  +    +   K  I+N   ++    + L+    K D  +++ E +   L D + +   
Sbjct: 935  DQEDRNSDLSRSKKKIENDVENLKKSIAELETRLQKTDADKQSREQQIRTLQDEMQQQDE 994

Query: 148  TCSKVFNYGISSVYRSL----KMKLTRMRSIYLNRLD--LENKSSLLRALLSSHQKDLTM 201
              +K+          +      +++   +  Y N+L   LE     L   L   ++    
Sbjct: 995  NIAKLNKEKKHQEEINRKLMEDLQVEEDKGNYSNKLKGKLEQSLDDLEDNLEREKRGRNE 1054

Query: 202  MKNLFEKNA----VSQNDLNQQERIVYKSTLELR----------ENIHEQKNMLRHINEL 247
            ++    K      V+Q ++ + ER  ++    L+            + E+++++  + + 
Sbjct: 1055 IEKQKRKIGGELKVAQENMEEIERQRHEIESNLKKKETEAQAITARLEEEQDLVGKLKKQ 1114

Query: 248  YDEANLEFA---NYLKEISRDLEQNQRTFADEMSKLTILEKTREQK 290
             +E           L+   +   + +R  +D   +L  L    +++
Sbjct: 1115 VNETQNRITELEEELENERQSRSKAERAKSDLQRELEELGDRLDEQ 1160



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 60/196 (30%), Gaps = 14/196 (7%)

Query: 106  LRCHIDTEKSALDFLNNKYDVLEKAFES--REEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
             +     E++  D      ++ ++  E        ++   K  +  +K+      +    
Sbjct: 1133 RQSRSKAERAKSDLQRELEELGDRLDEQGGATAAQVEVNKKREAELAKLRRDLEEANMNH 1192

Query: 164  LKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER-- 221
                    +       +L ++   ++   +  +KD  M      ++ V+Q D    ER  
Sbjct: 1193 ENQLAAIRKKHNDAVAELGDQIEQVQKAKAKIEKD-KMQAQRERQDLVAQIDGETAERMN 1251

Query: 222  ------IVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEISRDLEQNQRT 272
                         EL+    EQ   L+    L    N E       ++E    +    R 
Sbjct: 1252 NEKLAKQYEMQIAELQTKCDEQNRQLQEFTTLKTRLNSENTDLGKQIEEAESQVNAMTRL 1311

Query: 273  FADEMSKLTILEKTRE 288
             A   S+L    ++ +
Sbjct: 1312 KAQLTSQLEEARRSLD 1327


>gi|50545503|ref|XP_500289.1| YALI0A20504p [Yarrowia lipolytica]
 gi|49646154|emb|CAG84227.1| YALI0A20504p [Yarrowia lipolytica]
          Length = 941

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 74/206 (35%), Gaps = 9/206 (4%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           + T +     + +++ K  ++ LR  ++     +D  +          E+    L D+  
Sbjct: 185 MATLDREMAEEKLEIAKREMEELRQELNVPSERIDSADEAAIQRNAQLEAALVSLRDYST 244

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
              ++ ++     ++S      +  +++ S      + +     LRA L       T++ 
Sbjct: 245 AQEASLNEQI-KQLNSKLTDYSLTQSQLESSEKRLEETQATLHELRAQLDDVMVSETLID 303

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
           +L EKN      + + +  V +        + E K +   +   +     +    +  + 
Sbjct: 304 SLTEKNLALTESVEKLQATVAE--------LEELKELNDELEAGHVATQKQLHQEIAYLE 355

Query: 264 RDLEQNQRTFADEMSKLTILEKTREQ 289
            +L   ++   D  ++   LE++  +
Sbjct: 356 SELNHAEKRTNDAHNRQQNLEQSVMR 381



 Score = 36.9 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 74/207 (35%), Gaps = 11/207 (5%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS-T 148
           +   D    ++ S+      ++++ +      ++ +  EK  E  +  L +   +     
Sbjct: 237 VSLRDYSTAQEASLNEQIKQLNSKLTDYSLTQSQLESSEKRLEETQATLHELRAQLDDVM 296

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
            S+     ++    +L   + ++++      +L+  +  L A   + Q      K L ++
Sbjct: 297 VSETLIDSLTEKNLALTESVEKLQATVAELEELKELNDELEAGHVATQ------KQLHQE 350

Query: 209 NAVSQNDLNQQER---IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRD 265
            A  +++LN  E+     +     L +++   + ++  +    +    +      +    
Sbjct: 351 IAYLESELNHAEKRTNDAHNRQQNLEQSVMRFREVVADLQAEIELWETKHREKQHDNESM 410

Query: 266 LEQNQRTFADEMSKLTILEKTREQKTI 292
           +    +T  +   KL  L  +   + I
Sbjct: 411 VSHV-KTVMEMNQKLQSLVASTRNQEI 436


>gi|320588547|gb|EFX01015.1| KAP-like kinetoplast-associated protein [Grosmannia clavigera
           kw1407]
          Length = 893

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/212 (10%), Positives = 65/212 (30%), Gaps = 4/212 (1%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
             ++ +     +  K      R  ++ E+ A +    +   +    E      ++   + 
Sbjct: 342 RADEEKRIQQAESIKRIEMEARARMEAERRADEERRKREAEVAARVEQEARSKIEAERRA 401

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
                K      + V +  + ++   R     R   E + +      +  + +   +  L
Sbjct: 402 EEERRKREAEVTARVEQEARSRIEAERRADEERRKREAEVAARVEQEARAKVEAERVAEL 461

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF-ANYLKEISR 264
             +   ++     ++    +   E R +   +K        +  EA     A    E  R
Sbjct: 462 ERRKREAEMTARVEQEARSRMEAERRADEERKKREAEVAARVEQEARARVEAERRAEDER 521

Query: 265 DLEQNQRTF---ADEMSKLTILEKTREQKTIL 293
             ++ +       +  +K+    + +E++ I 
Sbjct: 522 RKQEAEVKAHLEQEARAKMEAERRAQEERKIR 553


>gi|317492789|ref|ZP_07951213.1| exonuclease SbcC [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918911|gb|EFV40246.1| exonuclease SbcC [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 1228

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 67/201 (33%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +           I  L   I T++  L     +Y       + R+E+L   L + H    
Sbjct: 731 KIQQETSHTIQQITLLEQSIQTQRRQLAEWREEYHKQTSHQQQRQERLATELLELHLVAP 790

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                      R  +  L + R ++  +L LEN          S        + L ++  
Sbjct: 791 LAGEENEWLAAREQEFSLWQQRQLHSQKLTLENTRLSADEQNLSQTLATLEKQWLTQQQL 850

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
            ++ +    +    + TL    ++ + +  L    +L +    +  +    + + L++  
Sbjct: 851 CAEQEKLLAQMQAERQTLLDGRSVDDVRRSLVQTEQLAEHQLQQAQHAESTVRQQLDKLS 910

Query: 271 RTFADEMSKLTILEKTREQKT 291
              +    +L+ LE+   Q+ 
Sbjct: 911 GELSSAQQQLSQLEQRLSQQQ 931



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 23/210 (10%), Positives = 64/210 (30%), Gaps = 10/210 (4%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE---EQLLDF 141
           +     E    +  +   ++N     +T +  L          ++  ++RE   ++    
Sbjct: 209 VELLSEEALAQLAERLALLQNEEQRQETARKTLTSELQWLQKHQELTQNRELCNQRTTQA 268

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             ++     ++     S     L+  L  +R    +   L       +         L  
Sbjct: 269 QQQWLDAQPEILRLERSEPAEKLRPLLQSLRQTRSDLSLLLKSQQQRQEQQQRLASQLEP 328

Query: 202 MKNLFEKNAVSQNDLNQ----QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           ++        ++    Q     E ++ +  + L   + + ++ L    +   + + E   
Sbjct: 329 LQTASAHALTAKQQQQQIRTTTETLINQHVVPLDARLAQTRDALTQQRQKLTQIDAEKQQ 388

Query: 258 ---YLKEISRDLEQNQRTFADEMSKLTILE 284
               L ++   L++ QR  +     LT   
Sbjct: 389 HNTALGQLREQLQKQQRELSQLQQTLTQTA 418



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 70/192 (36%), Gaps = 6/192 (3%)

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            G P      +E   + + +   + +     D  +  ++ L+ +   L +  +   +   
Sbjct: 596 AGDPCPLCGSLEHPAVENYQAPILSDSEQRRDALRLEVETLSREGSELGERQKLLLQTQS 655

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
               +  +   ++  Y       +  ++L   +    +R  LEN    +     S QK +
Sbjct: 656 QQQQETQTVDQEITQYQRRWEQTTATLEL---KIAIEDRSALENYLVDIVQQEDSIQKSI 712

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDEANLEFA 256
              + L +    ++++LN+ ++    +  +   L ++I  Q+  L    E Y +      
Sbjct: 713 RQQETLNKTWQQAKDELNKIQQETSHTIQQITLLEQSIQTQRRQLAEWREEYHKQTSHQQ 772

Query: 257 NYLKEISRDLEQ 268
              + ++ +L +
Sbjct: 773 QRQERLATELLE 784


>gi|302845917|ref|XP_002954496.1| type XI myosin heavy chain MyoA [Volvox carteri f. nagariensis]
 gi|300260168|gb|EFJ44389.1| type XI myosin heavy chain MyoA [Volvox carteri f. nagariensis]
          Length = 1668

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 68/193 (35%), Gaps = 16/193 (8%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
            +N R  +   +     +  +     + F++R      FL    +  +    + I    R 
Sbjct: 840  RNARQRLAQLRRMGAAVTIQRYW--RGFKARRA----FLEARRAAIAVQSGFRIKVARRE 893

Query: 164  LKMKLTRMRS---IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQE 220
            L+    + R    +  ++  LE K   L+A+L + Q     ++   ++   ++ +L   E
Sbjct: 894  LRALRQQAREGTKLLEDKKALEQKVHELQAMLETVQGQRNELRQQVKEELAARAEL---E 950

Query: 221  RIVYKSTLELR----ENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            R V +   EL       + E +       +  D    E A+  + ++   E   R   + 
Sbjct: 951  RRVEEMKAELEVASLSRLEEAQQQQAATQQDNDRLQQEMASLKERLAASEEMANRKAQEM 1010

Query: 277  MSKLTILEKTREQ 289
             + L   +    Q
Sbjct: 1011 ATALKKAQDYIGQ 1023



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 71/218 (32%), Gaps = 25/218 (11%)

Query: 98   LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
            ++  S + L   +  EK+AL           ++    + +L+  +       +       
Sbjct: 789  VRAWSARKLTTQLRREKAALTIQRMWRGYKARSTYLEQRRLIMAVQSMFRGRNARQRLAQ 848

Query: 158  SSVYRSLKMKLTRMRSIYLNRLDLENKSSLL------------RALLSSHQKDLTMMKNL 205
                 +        R     R  LE + + +            R L +  Q+     K L
Sbjct: 849  LRRMGAAVTIQRYWRGFKARRAFLEARRAAIAVQSGFRIKVARRELRALRQQAREGTKLL 908

Query: 206  FEKNAVSQ--NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA----NYL 259
             +K A+ Q  ++L      V     ELR+ + E+      +    +E   E      + L
Sbjct: 909  EDKKALEQKVHELQAMLETVQGQRNELRQQVKEELAARAELERRVEEMKAELEVASLSRL 968

Query: 260  KE-------ISRDLEQNQRTFADEMSKLTILEKTREQK 290
            +E         +D ++ Q+  A    +L   E+   +K
Sbjct: 969  EEAQQQQAATQQDNDRLQQEMASLKERLAASEEMANRK 1006


>gi|297267485|ref|XP_001118237.2| PREDICTED: serine/threonine-protein kinase MRCK gamma-like [Macaca
           mulatta]
          Length = 1561

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/214 (10%), Positives = 68/214 (31%), Gaps = 21/214 (9%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
           D    + +  +  +++     +  +K++L  L+          +S   Q LD L +  + 
Sbjct: 442 DHRELEQLRKEVQTLQERLSELLRDKASLSQLDGPTPG-SPGQDSDLRQELDQLHQELAK 500

Query: 149 CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
                      + ++   +   ++ +   +      +   +AL S  ++     + L  +
Sbjct: 501 GRAGLQAQEQELCKAQGQQDKLLQRLQEAQEREAATAIQTQALSSQLEEARAAQRELEAQ 560

Query: 209 NAVSQNDLNQQERIVYKSTLELRE--------------------NIHEQKNMLRHINELY 248
            +     + Q +    +   E  +                       + +  +  + E  
Sbjct: 561 VSSLTRQVMQLQGQWEQRLEESSQAKTIHTASETNGMGPPEGGPQEAQLRKEVAALREQL 620

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTI 282
           ++A+    +  +E    L++  R  + E  +L  
Sbjct: 621 EQAHSHRPSGKEEALCQLQEENRRLSREQERLEA 654


>gi|296212471|ref|XP_002752847.1| PREDICTED: liprin-alpha-2 [Callithrix jacchus]
          Length = 1257

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 24/226 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L +  K   + +R  +      +  L  +     +   +  EQ +    K  S+    
Sbjct: 178 KSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGST 237

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF------ 206
            +  +  +    K+   R+ +  ++  D  ++   L+ LL     ++  MK         
Sbjct: 238 ESEHLEGLEPGQKIHEKRLSNGSIDSTDDTSQIVELQELLEKQNYEMAQMKERLAALSSR 297

Query: 207 -----EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL-------------Y 248
                ++   ++ DL + E +  K   ++RE + ++++M   I  L              
Sbjct: 298 VGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSI 357

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + N +  N L      L Q +        +L + E+  +Q    +
Sbjct: 358 HDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKA 403



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 80/219 (36%), Gaps = 19/219 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E  +L++ +   +  ++  +    S +  +  + +   K     EE    +        
Sbjct: 271 VELQELLEKQNYEMAQMKERLAALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAM 330

Query: 150 SKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++       I+++ +          SI+     LEN+ +   A+L   ++     + L E
Sbjct: 331 AQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEK---NRQLQE 387

Query: 208 KNAVSQNDLNQQER---IVYKSTLELRENIHE----------QKNMLRHINELYDEANLE 254
           +  +++  L Q  R    + +   EL + I             +  +RH+    +E N E
Sbjct: 388 RLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEEKNQE 447

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                ++  +  E++ +  +D + +L      R Q  + 
Sbjct: 448 L-QRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLK 485


>gi|282880094|ref|ZP_06288814.1| efflux transporter, RND family, MFP subunit [Prevotella timonensis
           CRIS 5C-B1]
 gi|281305967|gb|EFA98007.1| efflux transporter, RND family, MFP subunit [Prevotella timonensis
           CRIS 5C-B1]
          Length = 396

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 35/102 (34%), Gaps = 9/102 (8%)

Query: 56  VVEIKSPF-----SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHI 110
           +  I+        SG I K  V+ G  +  G  L   ++      +   + ++ + +  +
Sbjct: 52  IKGIQDVEIRPKVSGFITKLLVQEGQTVKAGQLLFVIDNSTFQASVRQAQAAVNSAKSQL 111

Query: 111 DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            T K   +      + L K     + +L      Y +  S V
Sbjct: 112 RTAKLTFE----NSEQLFKRNVIGQYELQSAQNTYETAKSAV 149


>gi|265763983|ref|ZP_06092551.1| ABC transporter permease [Bacteroides sp. 2_1_16]
 gi|263256591|gb|EEZ27937.1| ABC transporter permease [Bacteroides sp. 2_1_16]
          Length = 416

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 104/314 (33%), Gaps = 20/314 (6%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE-EQLLDFLGKYHSTCSK 151
           ++ I + +V       ++D E      L  K +  E     R   +    L K  +  + 
Sbjct: 45  SENIQIAEVKDDKFMEYVDVEGLIQPILTIKVNTREAGSVERIIAEEGSLLQKGDTILTL 104

Query: 152 VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                + S+         +  +     +++E KS  L+        +L  +K        
Sbjct: 105 SNPDLLRSIEDQRDDWEKQRITYQEKEIEMEQKSLSLKQQTLETNYELARLK-------- 156

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
            ++    +E        + +  + E +   +  N       L   + +  I +DL   + 
Sbjct: 157 -KSFTLDKEEFRMGIKSKAQLEVSEDEYNYKVKNAELQREGLRHDSAVTIIRKDL--IRT 213

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
               E  K     +      + +PI+G + + +  +       S+ + +I        I 
Sbjct: 214 DMERERKKYERATERLGNLVVKAPISGQLSFVKV-TPGQQVGSSESIAEIK-VLDQYKIH 271

Query: 332 AKVTPKQIQHVKKGYTATVRFPH--YADIREKKFKAIIEK---IDPI-ISQQDNNLQTQE 385
             ++   I  +  G  ATV +    Y     K    + ++   +D +   +  +N++  +
Sbjct: 272 TSLSEYYIDRITTGLPATVNYQGKKYPLRITKVVPEVKDRMFDVDLVFTGEMPDNVRVGK 331

Query: 386 YYEVILKITDLAFS 399
            + V +++     +
Sbjct: 332 SFRVQIELGQPEQA 345


>gi|254720219|ref|ZP_05182030.1| RND family efflux transporter MFP subunit [Brucella sp. 83/13]
 gi|265985231|ref|ZP_06097966.1| efflux transporter [Brucella sp. 83/13]
 gi|264663823|gb|EEZ34084.1| efflux transporter [Brucella sp. 83/13]
          Length = 372

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 55/172 (31%), Gaps = 9/172 (5%)

Query: 215 DLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF----ANYLKEISRDLEQNQ 270
            ++  E+       +   +  E + +    N    +A L+      +   +  + L   Q
Sbjct: 97  RIDDVEQRANMRVAQASIDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQ 156

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
              +   S+L           + +P++G +      +     Q +Q    I        I
Sbjct: 157 SALSSAQSQLGNARDELSYTELHAPVSGVVTARNIET-GQVVQAAQTAFSIAEDGSRDAI 215

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
              V    + H + G   TV       I   + +  I ++ P++  Q   ++
Sbjct: 216 -FDVQETLVNHARIGMGVTVALLADPSI---EAEGNIRELSPVVDAQTGTVR 263



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           +  +V++   +     V       +G + +  V+ G  + +G  L   +D+E    + + 
Sbjct: 58  LSGAVAARSLVNVSFRV-------NGQVVERLVDIGQHVEKGQLLARIDDVEQRANMRVA 110

Query: 100 KVSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + SI      +   D        L  +       ++  ++ L        S  S++ N  
Sbjct: 111 QASIDAAEAQLVQADANFKRQQALLKQGFTTRSQYDQADQALRTAQSALSSAQSQLGNAR 170

Query: 157 ISSVYRSLKMKLTRM---RSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y  L   ++ +   R+I   ++    +++   A   S      + + L      ++
Sbjct: 171 DELSYTELHAPVSGVVTARNIETGQVVQAAQTAFSIAEDGSRDAIFDVQETLVNH---AR 227

Query: 214 NDLNQQERIVYKSTLELRENIHEQK 238
             +     ++   ++E   NI E  
Sbjct: 228 IGMGVTVALLADPSIEAEGNIRELS 252


>gi|224076429|ref|XP_002195240.1| PREDICTED: similar to rCG33450 [Taeniopygia guttata]
          Length = 2001

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 74/196 (37%), Gaps = 12/196 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              +  + +   D+    +  L+  ++   S +  L  K + LE   +    Q        
Sbjct: 1421 RLQREKLSREKDVLVAEVFGLKQLLEDRDSDIAGLTQKAEALEAELQDISSQESKDEASL 1480

Query: 146  HSTCSKV--FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA----LLSSHQKDL 199
                 ++      +      L  +   ++ +   +L LE +   LR      + S  +++
Sbjct: 1481 AKVKKQLRDLEAKVKDQEEELDEQAGTIQMLEQAKLRLEMEMERLRQTHAKEVESRDEEV 1540

Query: 200  TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
              ++  ++K       L Q E  + +   + ++ + E++ +   ++ + ++AN       
Sbjct: 1541 EEIRQSYQKK------LKQMEVQLEEEYEDKQKVLREKRELESKLSAVSEQANQRDFETE 1594

Query: 260  KEISRDLEQNQRTFAD 275
            K + RDL++ +   AD
Sbjct: 1595 KRLRRDLKRTKALLAD 1610



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 81/227 (35%), Gaps = 20/227 (8%)

Query: 76   SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             ++ +    L              +  I  L   +  E++  +  +   D         E
Sbjct: 1214 EKVEKERNELRLNSDR-------LESRITELTSELTDERNTGESASQLLDAETAERLRAE 1266

Query: 136  EQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSH 195
            +++ D   KY +   ++ +  +  +   L        +     LD ++     R      
Sbjct: 1267 KEMKDLQAKYDALKKQMESMEMEVMEARLIRA-----AELNGELDDDDSGGEWRLKYERA 1321

Query: 196  QKDLTMMKNLFEKNAVSQNDLNQQ-ERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             +++   K   ++    + ++ QQ +R + +   +L+ +  E +  L+ + +       E
Sbjct: 1322 VREIDFTKKRLQQELEDKLEVEQQGKRQLERKLADLQADSEESQRALQQLKKKCQRLAAE 1381

Query: 255  FANY------LKEISRDLEQNQRTFADEMSKL-TILEKTREQKTILS 294
              +        +  + DLE+ QR F  E+S+     ++ R Q+  LS
Sbjct: 1382 LQDTKLHLEGQQGRNHDLEKKQRRFDSELSQAHEEAQRERLQREKLS 1428



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 16/213 (7%)

Query: 86   TFEDIETTDLIDLKKVSIKN-LRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
              +       ID  K  ++  L   ++ E+     L  K   L+   E  +  L     K
Sbjct: 1315 RLKYERAVREIDFTKKRLQQELEDKLEVEQQGKRQLERKLADLQADSEESQRALQQLKKK 1374

Query: 145  YHSTCSKVFN-----YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK-- 197
                 +++ +      G       L+ K  R  S      +   +  L R  LS  +   
Sbjct: 1375 CQRLAAELQDTKLHLEGQQGRNHDLEKKQRRFDSELSQAHEEAQRERLQREKLSREKDVL 1434

Query: 198  --DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEF 255
              ++  +K L E        L Q+   +     ++     + +  L  + +   +   + 
Sbjct: 1435 VAEVFGLKQLLEDRDSDIAGLTQKAEALEAELQDISSQESKDEASLAKVKKQLRDLEAKV 1494

Query: 256  ANYLKEISRD------LEQNQRTFADEMSKLTI 282
             +  +E+         LEQ +     EM +L  
Sbjct: 1495 KDQEEELDEQAGTIQMLEQAKLRLEMEMERLRQ 1527



 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 57/163 (34%), Gaps = 5/163 (3%)

Query: 104  KNLRCHIDTEKSALDFLNNKYDVLEKAFESREE--QLLDFLGKYHSTCSKVFNYG--ISS 159
            K LR  +   K+ L       D L+    S+ E  QL + L +   TC+        + S
Sbjct: 1595 KRLRRDLKRTKALLADAQIMLDHLKNNAPSKREITQLKNQLEESEFTCAAAVKARKSMES 1654

Query: 160  VYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-TMMKNLFEKNAVSQNDLNQ 218
            +   LK  + ++      R   EN+       L    +D+   M  L +K A +    ++
Sbjct: 1655 LATRLKENMEKLTEERDQRAAAENREKEQNKRLQRQLRDVKEEMGELAKKEAEASRKKHE 1714

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
             E  +       +    + K   + I +L      E  +   E
Sbjct: 1715 LEMDLESLEAANQSLQSDLKLAFKRIGDLQAAIEDEMESDSNE 1757


>gi|194380522|dbj|BAG58414.1| unnamed protein product [Homo sapiens]
          Length = 768

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 65/188 (34%), Gaps = 2/188 (1%)

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
            + L+   ++  R  +D E      L  +     +     E Q L  + +      +   
Sbjct: 500 DVSLELQQLREERNRLDAELQLSARLIQQEVGRAREQGEAERQQLSKVAQQLEQELQQTQ 559

Query: 155 YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL--SSHQKDLTMMKNLFEKNAVS 212
             ++S+   L++     +        L  + +  + L   +  +K   +   L E+ + +
Sbjct: 560 ESLASLGLQLEVARQGQQESTEEAASLRQELTQQQELYGQALQEKVAEVETRLREQLSDT 619

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           +  LN+  R   K+ + LR+             EL            + ++R L++ +R 
Sbjct: 620 ERRLNEARREHAKAVVSLRQIQRRAAQEKERSQELRRLQEEARKEEGQRLARRLQELERD 679

Query: 273 FADEMSKL 280
               + +L
Sbjct: 680 KNLMLQRL 687



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +A   + E ++  L +      +V     +S+ + ++++   M    L R +   ++   
Sbjct: 85  QALSQQAEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEA- 143

Query: 189 RALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELY 248
              L +      +++   E+   SQ +L + +R+  +    L +   E  + L    E  
Sbjct: 144 -EGLRAALAGAEVVRKNLEEG--SQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGL 200

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +++           +++L + QR       +L+  ++  E + 
Sbjct: 201 EKSLSSLETRRAGEAKELAEAQREAELLRKQLSKTQEDLEAQV 243



 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 69/218 (31%), Gaps = 10/218 (4%)

Query: 68  KKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVL 127
            +  V    ++ +    +      +       +     L      EK+           L
Sbjct: 91  AEVIVRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELEALARAEKAGRAEAEGLRAAL 150

Query: 128 EKAFESREEQLLDFLGKYHSTCSKVFNYGISSV----YRSLKMKLTRMRSIYLNRLDLEN 183
             A   R + L +   +      ++    +SS+      +L    ++   +  +   LE 
Sbjct: 151 AGAEVVR-KNLEEGSQRELEEVQRLHQEQLSSLTQAHEEALSSLTSKAEGLEKSLSSLET 209

Query: 184 KSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
           + +     L+  Q++  +++    K   +Q DL  Q  +V      + E +  +  +   
Sbjct: 210 RRAGEAKELAEAQREAELLRKQLSK---TQEDLEAQVTLVENLRKYVGEQVPSE--VHSQ 264

Query: 244 INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
             EL  +  LE   +L+E    L          +  LT
Sbjct: 265 TWELERQKLLETMQHLQEDRDSLHATAELLQVRVQSLT 302


>gi|154340994|ref|XP_001566450.1| kinesin [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063773|emb|CAM39961.1| putative kinesin [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 1628

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 68/219 (31%), Gaps = 11/219 (5%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY---DVLEKAFESREEQLLD 140
           L   ED        ++ +  +  R  +  EK  ++         D      E  E+Q + 
Sbjct: 419 LRELEDQREAYEAQMQALEAEAERARVQQEKREVELRRAHEVATDYARNRLEEMEKQCVS 478

Query: 141 FLGKYHSTCSKVFNYGISSVYRSLKMKLT---RMRSIYLNRLDLENKSSLLRALLSSHQK 197
                 S   ++     +   +    + +   R+  +   + ++E        L S H++
Sbjct: 479 AEAALRSKEEELVKKQRAIEEKMRAAEASSRCRIDGLQQQQQEMEKTLKEKERLASMHER 538

Query: 198 DLTMMKNLFEKNAVS-QNDLNQQERI----VYKSTLELRENIHEQKNMLRHINELYDEAN 252
           ++       E+   S +    Q E+     V    +  ++   E    +R   E   +A 
Sbjct: 539 EMRHKYEKAEEELKSMETRHFQMEQEWLAKVKTLEVTAKQREEEVAQRIREAQEAQCKAE 598

Query: 253 LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                  +E+ R   +         S+  + E    ++ 
Sbjct: 599 AAARRKEEEMQRKWIEADNKGRQLQSEAAVKEAELSRRV 637



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/211 (10%), Positives = 70/211 (33%), Gaps = 8/211 (3%)

Query: 78  ILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ 137
           + +       ++         ++++ +  R   D    +L        +LE     +  +
Sbjct: 628 VKEAELSRRVQEANRKAEKREEEINERLRRAEYDL---SLRERETTRQLLEVEALRQATE 684

Query: 138 LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK 197
           L     +      +  +   +   + ++ +L +       + D      L++   + + +
Sbjct: 685 LQSETTRAKERTIEEAHSVRTESLQVIEAQLQQREKELRKQFD-----ELMQVKRAWNDQ 739

Query: 198 DLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
                + L E++  S   + Q E  V +  +ELR    E    LR      ++  +    
Sbjct: 740 HADQRQKLHEEHEASLKAVRQWESDVSQREMELRRQNVELAGKLRAQEMELEKQQMALLA 799

Query: 258 YLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
              E    +++++R       ++ + +   +
Sbjct: 800 DKNEFETAMQRDRRAMLRTREEMQLTQDRND 830



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 76/210 (36%), Gaps = 18/210 (8%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
            +L+  ++   + +R    + +  +D L  +   +EK  + +E        +      K 
Sbjct: 488 EELVKKQRAIEEKMRAAEASSRCRIDGLQQQQQEMEKTLKEKERLASMHEREMRHKYEKA 547

Query: 153 FNYGISSVYRSLKMKL------------TRMRSIYLNRLDLENKSSLLRALLSSHQKDLT 200
                S   R  +M+              + R   + +   E + +  +A  ++ +K+  
Sbjct: 548 EEELKSMETRHFQMEQEWLAKVKTLEVTAKQREEEVAQRIREAQEAQCKAEAAARRKEEE 607

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH--INELYDEANLEFANY 258
           M +   E  A ++    Q E  V ++ L  R     +K   R   INE    A  + +  
Sbjct: 608 MQRKWIE--ADNKGRQLQSEAAVKEAELSRRVQEANRKAEKREEEINERLRRAEYDLSLR 665

Query: 259 LKEISRDL--EQNQRTFADEMSKLTILEKT 286
            +E +R L   +  R   +  S+ T  ++ 
Sbjct: 666 ERETTRQLLEVEALRQATELQSETTRAKER 695



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 70/205 (34%), Gaps = 5/205 (2%)

Query: 84  LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
           L +  + E     +  +  +K++       +          +V  K  E    Q +    
Sbjct: 532 LASMHEREMRHKYEKAEEELKSMETRHFQMEQEWLAKVKTLEVTAKQREEEVAQRIREAQ 591

Query: 144 KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +               + R       + R +       E + S  R +  +++K     +
Sbjct: 592 EAQCKAEAAARRKEEEMQRKWIEADNKGRQLQSEAAVKEAELS--RRVQEANRKAEKREE 649

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLE---LRENIHEQKNMLRHINELYDEANLEFANYLK 260
            + E+   ++ DL+ +ER   +  LE   LR+    Q    R      +EA+      L+
Sbjct: 650 EINERLRRAEYDLSLRERETTRQLLEVEALRQATELQSETTRAKERTIEEAHSVRTESLQ 709

Query: 261 EISRDLEQNQRTFADEMSKLTILEK 285
            I   L+Q ++    +  +L  +++
Sbjct: 710 VIEAQLQQREKELRKQFDELMQVKR 734



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 24/220 (10%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            LL  ED++   + +  +   ++L    +  K     +     VL  +   R  +    L 
Sbjct: 1261 LLELEDMDQRKMREYAERE-RHLVEIAEHLKMRQARIRTNAQVLFHSLLQRSVEQQLVLT 1319

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL---------ENKSSLLRALLSS 194
            + H    ++       + R+ ++     R   +   +L           K  L R     
Sbjct: 1320 EAHEELKRINRQRAKYMARARQLTEQVQRGNAVAMQELVKLHEEYVESEKQQLTRRAHRI 1379

Query: 195  HQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE 254
             ++++   + L E           QE  +++  LE+ E    +  + +   EL  EA   
Sbjct: 1380 EEEEVRSKQRLAE-----------QEAEIHRYLLEIEEEDVRRNALSQQGQELMQEAEAR 1428

Query: 255  F--ANYLKEISRDL-EQNQRTFADEMSKLTILEKTREQKT 291
               A + +   RDL  Q      +   K   +E T  ++ 
Sbjct: 1429 LSKAQFKEAALRDLARQIHLEAMESEEKARTMETTLRREE 1468


>gi|123409642|ref|XP_001303475.1| Formin Homology 2 Domain containing protein [Trichomonas vaginalis
           G3]
 gi|121884858|gb|EAX90545.1| Formin Homology 2 Domain containing protein [Trichomonas vaginalis
           G3]
          Length = 2354

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 76/205 (37%), Gaps = 14/205 (6%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            T   +   K   KNL   I+   S L+ +  + ++  +  E     +     KY     
Sbjct: 651 RTASALQELKTQNKNLESDIENLTSKLNEITKQNEMKSREIERLNADIEQEKSKYKEQID 710

Query: 151 KVFNY--GISSVYRSLKMKLTRMRSI-----YLNRLDLENKSSLLRALLSSHQKDLTMMK 203
           +  N      ++   LK ++ + + +       ++  +E KSS    L    ++     K
Sbjct: 711 QKQNQIDQQFAMLNDLKQQIDQQKQMNEELNIKSQRLVETKSSEYSDLSKQLEELQIRNK 770

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
            L E   V  +DL Q+++ + +   E  + I +  N L+++N   +       N   ++ 
Sbjct: 771 ELEESKKVLHSDLLQKQQSIKQ---EKEQEIEQITNQLKNVNISLE----NSLNEKSQLE 823

Query: 264 RDLEQNQRTFADEMSKLTILEKTRE 288
             L+  +  F +   KL    +   
Sbjct: 824 EQLKSKETKFNELKEKLNTSIENLR 848



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 68/200 (34%), Gaps = 3/200 (1%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +  + ID +   + +L+  ID +K   + LN K   L +   S    L   L +     +
Sbjct: 711 QKQNQIDQQFAMLNDLKQQIDQQKQMNEELNIKSQRLVETKSSEYSDLSKQLEELQ-IRN 769

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K        ++  L  K   ++       ++E  ++ L+ +  S +  L     L E+  
Sbjct: 770 KELEESKKVLHSDLLQKQQSIKQEKEQ--EIEQITNQLKNVNISLENSLNEKSQLEEQLK 827

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +   N+ +  +  S   LRE     K  +  +     +            S  L Q  
Sbjct: 828 SKETKFNELKEKLNTSIENLREENETLKEEINKLQTTTADEKTTLLQSFNAESEPLRQKI 887

Query: 271 RTFADEMSKLTILEKTREQK 290
                 ++KL    +  + K
Sbjct: 888 NQQNQIITKLQRENQQLQNK 907



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 84/224 (37%), Gaps = 13/224 (5%)

Query: 79   LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDF----LNNKYDVLEKAFESR 134
             Q   LLT  + +  +     ++ +K L   +  ++   +     L + +   ++    +
Sbjct: 910  EQTQLLLTEFNNQRQNDQKEHEIIVKKLNDELQQKQQIYNEEKSVLESTFSQEKQNMLLQ 969

Query: 135  EEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNR--LDLENKSSLLRALL 192
             +Q ++ +   + +          +  +S+  +    + I +N   + L+   +  ++  
Sbjct: 970  SKQQINQIILQNQSEKDQLTTNYENKIKSIMEQNENEKQIIINNHNIALQTTYNNYQSEK 1029

Query: 193  SSHQKDLTMMKNLFEKNAVS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
                K     KN +E+     +  +++QE        EL+    E +  +   N++ DEA
Sbjct: 1030 DQLVKKFNDDKNNYEQTIKELKQKVDRQENNNKNQAYELQTAQKELEKQINKYNQVVDEA 1089

Query: 252  NLEFA------NYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            N          N  K+  ++ ++  +   + + +L    K R+ 
Sbjct: 1090 NNRQEKLIGHINKYKDAVKERDEELQNRENIIDQLNNEIKKRDN 1133



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 26/227 (11%), Positives = 82/227 (36%), Gaps = 23/227 (10%)

Query: 86  TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              + ++++  DL K  ++ L+      + +   L++     +++ +  +EQ ++ +   
Sbjct: 746 RLVETKSSEYSDLSK-QLEELQIRNKELEESKKVLHSDLLQKQQSIKQEKEQEIEQITNQ 804

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK-- 203
               +      ++   +  +   ++       +  L      LR    + ++++  ++  
Sbjct: 805 LKNVNISLENSLNEKSQLEEQLKSKETKFNELKEKLNTSIENLREENETLKEEINKLQTT 864

Query: 204 -----------------NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINE 246
                             L +K       + + +R   +   ++ E   + + +L   N 
Sbjct: 865 TADEKTTLLQSFNAESEPLRQKINQQNQIITKLQRENQQLQNKMEE---QTQLLLTEFNN 921

Query: 247 LYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                  E    +K+++ +L+Q Q+ + +E S L       +Q  +L
Sbjct: 922 QRQNDQKEHEIIVKKLNDELQQKQQIYNEEKSVLESTFSQEKQNMLL 968


>gi|119192064|ref|XP_001246638.1| hypothetical protein CIMG_00409 [Coccidioides immitis RS]
          Length = 1050

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 78/202 (38%), Gaps = 10/202 (4%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           +   L D  +   +     ++ E         +  +L + ++ R + L + L + +S  +
Sbjct: 364 QEQLLRDQYQQQTQGRLAELEQENLNARAQYERDQLLLQQYDKRVKDLEEQLNQLNSNYN 423

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
            + N       R+L+ ++   RS Y      E  + L   L   H   L   K+L  K A
Sbjct: 424 -LQNTSKDDQIRALQEQVNTWRSKY------EALAKLYSQLRQEHLDLLQTTKSLKLKAA 476

Query: 211 VSQNDLN---QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLE 267
            +Q  ++   + ER +    LEL + I E+   L   + +      E     +E+   +E
Sbjct: 477 SAQEAIDKRERLEREMKTKNLELADMIRERDRALHEKDRISGGNKEELEKVKRELRLAIE 536

Query: 268 QNQRTFADEMSKLTILEKTREQ 289
           + +     + S+++ +     +
Sbjct: 537 RAENAERAKSSEISAMLSKYNR 558


>gi|86607501|ref|YP_476264.1| chromosome segregation protein SMC [Synechococcus sp. JA-3-3Ab]
 gi|86556043|gb|ABD01001.1| chromosome segregation protein SMC [Synechococcus sp. JA-3-3Ab]
          Length = 1180

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 63/205 (30%), Gaps = 6/205 (2%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY----DVLEKAFESREEQLLDFLGKYH 146
           + T  +      ++     +   +S +  L  +          A E + +QL   +  + 
Sbjct: 267 QATAQVQTLSEQLQQAEAALSELQSRIHALGEEEYLHLQAQIAAAEVQRQQLSQQIAAWQ 326

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               +          +   ++   +  +   +  L      L+A +   Q  L   +   
Sbjct: 327 QEIEQTQRLQQERQTQQQHLQ-AELERLQSQQEQLAQAQGSLQAQVQKAQISLEQSREQL 385

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
              A S     +Q+R + +   E+R      +     + E   +   +  +   EI   +
Sbjct: 386 RALAQSAEAWVKQQRYLTRHLEEIRAEQEPLQQEQIRLQERQRQLARQVQDTQTEI-AQI 444

Query: 267 EQNQRTFADEMSKLTILEKTREQKT 291
           E+   +     ++L    +  E + 
Sbjct: 445 EEWLGSHLALTAELEQACRQSEAQV 469



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/224 (10%), Positives = 68/224 (30%), Gaps = 12/224 (5%)

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ-- 137
           QG  LL   +          +      +  +   +     +      + +  E++E+   
Sbjct: 211 QGERLLRESEKAQQYQQLRLQWQTLERQQRVLLWRHLQAQVEATQAAIRQLLEAQEQATA 270

Query: 138 ----LLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
               L + L +  +  S++ +   +           ++ +  + R  L  + +  +  + 
Sbjct: 271 QVQTLSEQLQQAEAALSELQSRIHALGEEEYLHLQAQIAAAEVQRQQLSQQIAAWQQEIE 330

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH------EQKNMLRHINEL 247
             Q+     +   +        L  Q+  + ++   L+  +       EQ          
Sbjct: 331 QTQRLQQERQTQQQHLQAELERLQSQQEQLAQAQGSLQAQVQKAQISLEQSREQLRALAQ 390

Query: 248 YDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
             EA ++   YL     ++   Q     E  +L   ++   ++ 
Sbjct: 391 SAEAWVKQQRYLTRHLEEIRAEQEPLQQEQIRLQERQRQLARQV 434


>gi|47087361|ref|NP_998576.1| Golgin subfamily A member 5 [Danio rerio]
 gi|82187585|sp|Q7SXE4|GOGA5_DANRE RecName: Full=Golgin subfamily A member 5; AltName: Full=Golgin-84
 gi|33417213|gb|AAH55639.1| Golgi autoantigen, golgin subfamily a, 5 [Danio rerio]
          Length = 760

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 74/204 (36%), Gaps = 7/204 (3%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFL--GKYHSTCS 150
           +  +   +  +++    +  E+ +   + +++       E+  + L + L   +   T  
Sbjct: 375 SQAVQTLQDRLRDAEAAVKREQESYRQIQSEFAARLAKVEAERQTLAESLTNAERRLTEE 434

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
           K     +    +S +      +    +  +  ++    +  L +  K+ + ++ L  + A
Sbjct: 435 KQRAEDLQQQAKSSRSAAEYTKQELQDYKNKASRILQSKEKLINSLKEGSGLEVL--EGA 492

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLE---FANYLKEISRDLE 267
            +  +L +          E+++   + +++   I +L  +A  E   +   L E+     
Sbjct: 493 GAGVELEELRHEKELQREEIQKLQAQIQSLRTEIQDLETQALTENESWREQLAEVQEQHA 552

Query: 268 QNQRTFADEMSKLTILEKTREQKT 291
           Q  R   +  ++L   ++  +   
Sbjct: 553 QQIRAKQEIEAELERSKQELQYIE 576



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 68/215 (31%), Gaps = 10/215 (4%)

Query: 82  TPLLTFEDIETTDLIDLKKVS--IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
            P+L  +  +       +     I NLR      ++ +  LN +   L +  +  +E++ 
Sbjct: 232 QPVLEIQSQDLQQQQQQQGQEHVISNLRLENQLLRNEVSSLNQEMASLIQRAKDMQEEV- 290

Query: 140 DFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL 199
             LG+  +         +    R L  ++  +      +   + + ++L+  L    + L
Sbjct: 291 -NLGRARADKWNSDQSRVDRTVRELSSQVDDLTEALSAK---DGQLAVLKVRLDEADQLL 346

Query: 200 TMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
               +  E+    +  + Q             + +   ++ LR            +    
Sbjct: 347 KARSSALEEAQNERVRILQDHSEGSSLH---SQAVQTLQDRLRDAEAAVKREQESYRQIQ 403

Query: 260 KEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            E +  L + +         LT  E+   ++   +
Sbjct: 404 SEFAARLAKVEAERQTLAESLTNAERRLTEEKQRA 438


>gi|308050392|ref|YP_003913958.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
 gi|307632582|gb|ADN76884.1| efflux transporter, RND family, MFP subunit [Ferrimonas balearica
           DSM 9799]
          Length = 368

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 46/119 (38%), Gaps = 4/119 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G++    V+ G  + QG  L   +D     L+  +   +      I+ ++S +D    + 
Sbjct: 78  GVVDAISVDTGELVKQGQELARLDD----ALLRSEAEQLTANLAQIEAQQSLVDTTLQRQ 133

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLEN 183
             LE      ++Q+ + L + +   +       S    +++ + +++ + +   +    
Sbjct: 134 RTLESQGYQSQQQIDELLSQQNELAALAQQLQASLSANTIRRQKSKLTAPFDGIVSQRQ 192



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 48/138 (34%), Gaps = 15/138 (10%)

Query: 204 NLFEKNAVSQNDLNQQERIVYKSTLE-LRENIHEQKNMLRHINELYDEANL------EFA 256
            L ++      +L + +  + +S  E L  N+ + +     ++              +  
Sbjct: 89  ELVKQG----QELARLDDALLRSEAEQLTANLAQIEAQQSLVDTTLQRQRTLESQGYQSQ 144

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQ 316
             + E+     +         + L+     R++  + +P  G +   Q  +        Q
Sbjct: 145 QQIDELLSQQNELAALAQQLQASLSANTIRRQKSKLTAPFDGIVSQRQL-APGQVVSPGQ 203

Query: 317 PLMKIVPHSKLTYIRAKV 334
           P++ +VP ++     A++
Sbjct: 204 PVLTLVPDAQG---EARI 218


>gi|297273653|ref|XP_002800650.1| PREDICTED: fas-binding factor 1-like [Macaca mulatta]
          Length = 1101

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/205 (10%), Positives = 64/205 (31%), Gaps = 6/205 (2%)

Query: 79  LQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL 138
            +   +   ++++   ++++++   + L+  +   K              ++  S  +Q+
Sbjct: 653 EKDQEMQRLQELQRASILEMRRDHEEQLQ-RLKLLKDREVDAATSATSHTRSLNSIIQQM 711

Query: 139 LDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKD 198
             F    H   S+V    +++          R   +   +  L  +   +    S  Q+ 
Sbjct: 712 EKFSSSLHELSSRVEASHLTTSQERELGIRQRDEQLRALQERLGQQQRDMEEERSRQQEI 771

Query: 199 LTMMKNLFEKNAVSQNDLNQQER-IVYKSTLELRENIHEQKNMLRHINELYDEANLEFAN 257
           +  M+    +    Q+ L +QER  V     +        +   +   +       E   
Sbjct: 772 IGKMEARLNE----QSRLLEQERWRVTAEQSKAESMQRALEEQRKVTAQQMAMERAELER 827

Query: 258 YLKEISRDLEQNQRTFADEMSKLTI 282
               +  + +       +E  +L  
Sbjct: 828 AKSTLLEEQKSVMLKCGEERRRLAA 852



 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 60/207 (28%), Gaps = 20/207 (9%)

Query: 77  QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
           ++               +   +    +   R  ++  KS L        +       R  
Sbjct: 792 RVTAEQSKAESMQRALEEQRKVTAQQMAMERAELERAKSTLLEEQKSVMLKCGEERRRLA 851

Query: 137 QLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                         +          +    +   + S+   + +L+ ++S LRA      
Sbjct: 852 AEWAEFSAQQKLSKERAEREAERALQVDTQREGTLISLAKEQAELKIRASELRAE----- 906

Query: 197 KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
                     EK   ++    +QER      L L +       +   +     E+  + A
Sbjct: 907 ----------EKQLAAERAALEQERQ----ELRLEKERTNATALRVKLRAEEVESMSKVA 952

Query: 257 NYL-KEISRDLEQNQRTFADEMSKLTI 282
           +   +E  R L + ++  A++ ++L  
Sbjct: 953 SEKYEEGERALREARQVQAEQQARLQA 979


>gi|226304028|ref|YP_002763986.1| hypothetical protein RER_05390 [Rhodococcus erythropolis PR4]
 gi|226183143|dbj|BAH31247.1| hypothetical protein RER_05390 [Rhodococcus erythropolis PR4]
          Length = 523

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 63/204 (30%), Gaps = 5/204 (2%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN--NKYDVLEKAFESREEQLLDFLGKYH 146
           D         + V +  LR   + E +  D      +    +    +RE+     +    
Sbjct: 228 DTAIASANQKRDVELARLRAQTEAENAEADQAGPLAQATAEKAVGIAREQAEAARVEART 287

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               +      +++   +       R   + R + E ++++LRA   +            
Sbjct: 288 EVERRRAQQSEAALQADVIAPAEAERQASIARAEGERQAAILRAQAQAESARQAGGAQAD 347

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEIS-- 263
            +  V+    ++Q+         L      +K     +  E   EA+   A    E +  
Sbjct: 348 ARKLVADAVRSEQQADADGLRARLEAEADGRKVAADAVRAEQQAEADGLRAKLEAEAAGK 407

Query: 264 RDLEQNQRTFADEMSKLTILEKTR 287
           R + +   ++  + ++L  L    
Sbjct: 408 RQIAEALNSYTPQAAQLLTLPDVL 431


>gi|260796647|ref|XP_002593316.1| hypothetical protein BRAFLDRAFT_123650 [Branchiostoma floridae]
 gi|229278540|gb|EEN49327.1| hypothetical protein BRAFLDRAFT_123650 [Branchiostoma floridae]
          Length = 1260

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 78/202 (38%), Gaps = 13/202 (6%)

Query: 86  TFEDIETTDLIDLK-KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
           T + ++      ++ +     L    +  +  +D  N   +     F ++EE+L   L  
Sbjct: 351 TLDLLQGEREKAIRVESERDQLLQQAEALQREVDNFNQMLETERSTFRAQEEELQKQLEL 410

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                 +V +   ++V+   +      +++     ++      L A  +  +++L M  +
Sbjct: 411 LTEKHQEVVDQEKAAVHAESQKAQEHQKALSSAHNEIGQLKMELNA-ANRDKENLKMELS 469

Query: 205 LFEKNA-VSQNDL-----NQQERIVYKSTLELRENIHEQKNMLR-----HINELYDEANL 253
           L E     SQ+ L      +QER + +   E  + + + +  LR      I E+ D    
Sbjct: 470 LQEARFEASQSKLESEYQAEQERKMSQQLSEAHDQLTQTEERLREQHRRQIQEVADRHRQ 529

Query: 254 EFANYLKEISRDLEQNQRTFAD 275
           +   ++K+  ++LEQ      +
Sbjct: 530 DLDTHMKQFHQELEQKDTKLRE 551



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 22/211 (10%), Positives = 71/211 (33%), Gaps = 2/211 (0%)

Query: 83  PLLTFEDIETTDLIDLKKVSIKNLRCHIDTE-KSALDFLNNKYDVLEKAFESREEQLLDF 141
           P+L  +D+    +      +       +D E  S      ++   +E        +   F
Sbjct: 167 PVLVSQDVSPVSVDSGLHTARGQWSSRVDGELASERRNSRSESLYVENQILRDSVERERF 226

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDL-T 200
             K+     +     I  + + L + ++  +   +    L+   + +         +   
Sbjct: 227 RRKHCEQQIQELQSKILELQQQLAVAVSTDKKKDVMIEQLDKTLAKVVEGWKKQDTEKTE 286

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           +++ L E+    +   ++Q+ ++     +L + + +     +  +    E   +F    +
Sbjct: 287 LIRKLKEEKYAIEKGHSRQQEVLMNFEKDLAQAVEQLAIEQQRASMAEQEKVAQFQKQQE 346

Query: 261 EISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           E ++ L+  Q      +   +  ++  +Q  
Sbjct: 347 EKAKTLDLLQGEREKAIRVESERDQLLQQAE 377



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/208 (11%), Positives = 71/208 (34%), Gaps = 10/208 (4%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           + +   +++    +  + +     + K DV+ +  +    ++++   K  +  +++    
Sbjct: 232 EQQIQELQSKILELQQQLAVAVSTDKKKDVMIEQLDKTLAKVVEGWKKQDTEKTELIRKL 291

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL---RALLSSHQKDLTMMKNLFEKNAVSQ 213
               Y   K    +   +     DL      L   +   S  +++        ++     
Sbjct: 292 KEEKYAIEKGHSRQQEVLMNFEKDLAQAVEQLAIEQQRASMAEQEKVAQFQKQQEEKAKT 351

Query: 214 NDLNQQERIVY-KSTLELRENIHEQKNMLRHINELYDEANLEFANYL---KEISRDLE-- 267
            DL Q ER    +   E  + + + + + R ++        E + +    +E+ + LE  
Sbjct: 352 LDLLQGEREKAIRVESERDQLLQQAEALQREVDNFNQMLETERSTFRAQEEELQKQLELL 411

Query: 268 -QNQRTFADEMSKLTILEKTREQKTILS 294
            +  +   D+       E  + Q+   +
Sbjct: 412 TEKHQEVVDQEKAAVHAESQKAQEHQKA 439


>gi|195155815|ref|XP_002018796.1| GL25755 [Drosophila persimilis]
 gi|194114949|gb|EDW36992.1| GL25755 [Drosophila persimilis]
          Length = 1588

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 75/243 (30%), Gaps = 24/243 (9%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +      L     E        K   + LR      ++ +  L       E+   +R 
Sbjct: 721 DSVASDELPLLVVPEELLQPDRELKQQCETLRAEATLREARMSELLTTLQRTEQQLTARL 780

Query: 136 EQLLDFLGKYHSTCSKVFNY--------------GISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++    L    +   +                   I  +   L   +    S+Y    +L
Sbjct: 781 QEQQQQLNGELAQAKQSAAELMHSLSLQLSESQCKIKQLEDRLAQGIEENESLYKRLREL 840

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI-VYKSTLELREN------- 233
           + + S + +L +  +  +  M +L +   +S  D    +R  + +   ELR         
Sbjct: 841 QAEGSQVASLSNLQRHKMKRMDSLSDLTTISDIDPYCLQRDSLAEEYNELRSRFEKAVNE 900

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISR-DLEQ-NQRTFADEMSKLTILEKTREQKT 291
           I   K  L+     YD   L  A   +++ R  LE   Q        +   L+ +  ++ 
Sbjct: 901 IRAMKRELKQSQNQYDALELAQAALQQKLERCQLEDGAQLQLMAARIQDLTLKYSSSERQ 960

Query: 292 ILS 294
           + +
Sbjct: 961 VRA 963



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 16/192 (8%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                 I+  +   K LR  +  E S +  L+N    L++    R + L D          
Sbjct: 822  RLAQGIEENESLYKRLR-ELQAEGSQVASLSN----LQRHKMKRMDSLSDLTTISDIDPY 876

Query: 151  KVFNYGISSVYRSLKMK----LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             +    ++  Y  L+ +    +  +R++       +N+   L    ++ Q+ L   +   
Sbjct: 877  CLQRDSLAEEYNELRSRFEKAVNEIRAMKRELKQSQNQYDALELAQAALQQKLERCQ--L 934

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            E  A     L      +   TL+   +  + + + + + +     +L      +++   L
Sbjct: 935  EDGA----QLQLMAARIQDLTLKYSSSERQVRALKQKLAKSERRRSLSLKG-KEQLELKL 989

Query: 267  EQNQRTFADEMS 278
             + QR   +  S
Sbjct: 990  SELQRETIERKS 1001


>gi|149917863|ref|ZP_01906358.1| hypothetical protein PPSIR1_12918 [Plesiocystis pacifica SIR-1]
 gi|149821383|gb|EDM80785.1| hypothetical protein PPSIR1_12918 [Plesiocystis pacifica SIR-1]
          Length = 960

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 75/215 (34%), Gaps = 7/215 (3%)

Query: 82  TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
             ++  +D+    +I+  +  +  L+         L+ L    + +    E  E+++ + 
Sbjct: 530 DEIIRLDDLVDGQIIERMEALVARLQASQQKLVDKLEQLAAGDESVRPEIEQLEQRIRED 589

Query: 142 LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             +     ++  +  +   + +L         +   +L  + +   +   L   +  L  
Sbjct: 590 TRRLQQAQAQ-LSKEVGEEWMNLDAYKAMEARMRSQQLLEQLQRGDVEGALEQARDGLDA 648

Query: 202 MKNLFEKNAVSQND-----LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
           ++ L E+   S  +     L++++R   K   EL     E+  +     +L+++      
Sbjct: 649 IRQLREQVQRSGAEAPSPALSEEDRKRMKLLRELSRLQDEEAGVRAEAQKLHEQWRASVG 708

Query: 257 NYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
           +   E     E+ ++       ++  +   R  + 
Sbjct: 709 DQRAETDAT-ERAKQEAEKLREEVEAVNDARLSRE 742


>gi|186471212|ref|YP_001862530.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
 gi|184197521|gb|ACC75484.1| secretion protein HlyD family protein [Burkholderia phymatum
           STM815]
          Length = 386

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/182 (10%), Positives = 51/182 (28%), Gaps = 9/182 (4%)

Query: 16  SLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENG 75
              +     +  I+  + W +    +     + +   +  VV + +  SG +    V N 
Sbjct: 33  PSGKAMKWVVCLIVLSLIWYLFA--DRFTPYTQQARVQAYVVPVAAEVSGRVTHVFVHNN 90

Query: 76  SQILQGTPLLTFEDI-------ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLE 128
            ++  G  L   +              ++  +  +      ID+  + L           
Sbjct: 91  QEVDAGQVLFEVDSEPYRIAADRARADLESTRRQVGASTAGIDSAVAGLRAAIANEVKAR 150

Query: 129 KAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLL 188
           +  E  E    +  G       +V           +      +      +   E +++ L
Sbjct: 151 QDSERLERLYREDEGTVSLRRLEVARATHEQAQSQVAAARAEVERAREQQGGSEAENAQL 210

Query: 189 RA 190
           R+
Sbjct: 211 RS 212



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 81/256 (31%), Gaps = 20/256 (7%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +    R DLE+    + A  +     +  ++        ++ D  + ER+  +    +  
Sbjct: 110 AADRARADLESTRRQVGASTAGIDSAVAGLRAAIANEVKARQDSERLERLYREDEGTVSL 169

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              E         +    A        +E     E          + L   E       I
Sbjct: 170 RRLEVARATHEQAQSQVAAARAEVERAREQQGGSEAENAQLRSAAAALEKAELDLANARI 229

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
            +  +G +V +       +A    P+M ++      +I A +T   + H++ G    +  
Sbjct: 230 KA-RSGGVVTDLRTEVGQFAAAGGPVMTLIAIRD-VWISADMTENNLGHLQPGTPVGI-- 285

Query: 353 PHYADIREKKFKAIIEKID--------------PIISQQDNNLQTQEYYEVILKITDLAF 398
                +  + F   +  I               P +    + L+  + + VI++      
Sbjct: 286 -ALDALPGEVFAGRVRSIGYGVSVGQSTPPGSLPTVQNSRDWLRPAQRFPVIVEFDQNER 344

Query: 399 SDNNIELRNGFPAEVL 414
           +  + ++R G  AEV+
Sbjct: 345 ARLH-DMRVGGQAEVM 359


>gi|116695794|ref|YP_841370.1| cobalt-zinc-cadmium resistance membrane-fusion protein [Ralstonia
           eutropha H16]
 gi|113530293|emb|CAJ96640.1| Cobalt-zinc-cadmium resistance membrane-fusion protein [Ralstonia
           eutropha H16]
          Length = 386

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 91/324 (28%), Gaps = 26/324 (8%)

Query: 103 IKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYR 162
           + +L        S     +    V E           +   +     + V     S + R
Sbjct: 6   LLSLTAAAVLTLSLAACSDKPEPVAEAPKLPPGVIQPEGNLQKGLKVAPVATSPFSEMLR 65

Query: 163 SLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA-VSQNDLNQQER 221
                    + +      +  + + L A L    K   ++  L       +Q    + E 
Sbjct: 66  VAGRVDFDEQRVARIGASVTGRVTDLYATLGQEVKAGQVLARLHSSELGAAQMAFLKSEA 125

Query: 222 IVYKSTLELRENIHEQKNM------LRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
                  EL+    E+         +        E+ L  A+      RD  +       
Sbjct: 126 QT-----ELQGRNAERARQLFAADVIGRGELQRRESELAIASAEMRAYRDQLRVLGMSQA 180

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVT 335
            +++L           + S I+GT+V     +     Q +  L   V      ++ A+V 
Sbjct: 181 SIAELARSGSINSHSPVFSSISGTVVERNV-AQGQVVQPADAL-YTVADLSRVWVVAEVP 238

Query: 336 PKQIQHVKKGYTATVRFPHY-ADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
            +Q   V +G +  +  P        K     +  +   ++ Q           V+++  
Sbjct: 239 EQQAAQVAEGQSVDIEVPSLGNGAGSKSITGKLIYVGRTVNPQSRT--------VLVRT- 289

Query: 395 DLAFSDNNIELRNGFPAEVLFTAK 418
                +    L+    A +L   K
Sbjct: 290 --ELENREGRLKPAMLASMLIAGK 311



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 39/143 (27%), Gaps = 7/143 (4%)

Query: 36  ILLPIEISVSSSGEILNEDNVVE-IKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
              P    +  +G +  ++  V  I +  +G +       G ++  G  L      E   
Sbjct: 56  ATSPFSEMLRVAGRVDFDEQRVARIGASVTGRVTDLYATLGQEVKAGQVLARLHSSELGA 115

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFN 154
                   +  L+    TE    +    +           E Q  +      S   + + 
Sbjct: 116 ------AQMAFLKSEAQTELQGRNAERARQLFAADVIGRGELQRRESELAIASAEMRAYR 169

Query: 155 YGISSVYRSLKMKLTRMRSIYLN 177
             +  +  S        RS  +N
Sbjct: 170 DQLRVLGMSQASIAELARSGSIN 192


>gi|159115677|ref|XP_001708061.1| Axoneme-associated protein GASP-180 [Giardia lamblia ATCC 50803]
 gi|157436170|gb|EDO80387.1| Axoneme-associated protein GASP-180 [Giardia lamblia ATCC 50803]
 gi|213495864|gb|ACJ49152.1| head-stalk protein GHSP-115 [Giardia intestinalis]
          Length = 1039

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 76/205 (37%), Gaps = 12/205 (5%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            + E    I      +  LR  +D    ALD L ++ ++L+   E ++ +++D        
Sbjct: 833  NSEKDKEIQGMDTELARLRLRLDESLPALDTLRSEVELLKSTMEDKDREIVDLKNTLDER 892

Query: 149  CSKV-------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
             + V        N  +  + + L +    +  +     D E   + +R      + +L  
Sbjct: 893  ATDVPIETVDALNAMLEDINQELAVSKQEVERLKDQLDDKEKNMADMRLKERQKEAELDE 952

Query: 202  MKNLFEKNAVS---QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA-- 256
            + N+ + + V      ++   +  +     +L  N  E +     + +  +E   + A  
Sbjct: 953  LSNMIQASMVGPDKAAEMTALQDEIRSLHNKLAANESEIEQTKDDLLKKQEEMERQAAAI 1012

Query: 257  NYLKEISRDLEQNQRTFADEMSKLT 281
            +Y +++  DL     T  D ++ + 
Sbjct: 1013 SYYQQLVEDLRAGIATLDDNLASIQ 1037


>gi|16131131|ref|NP_417708.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           str. K-12 substr. MG1655]
 gi|89110003|ref|AP_003783.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           str. K-12 substr. W3110]
 gi|110807103|ref|YP_690623.1| p-hydroxybenzoic acid efflux subunit AaeA [Shigella flexneri 5 str.
           8401]
 gi|157155237|ref|YP_001464714.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli
           E24377A]
 gi|170082772|ref|YP_001732092.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           str. K-12 substr. DH10B]
 gi|191168180|ref|ZP_03029976.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           B7A]
 gi|193065372|ref|ZP_03046443.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           E22]
 gi|193070305|ref|ZP_03051248.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           E110019]
 gi|194429094|ref|ZP_03061624.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           B171]
 gi|218696940|ref|YP_002404607.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli 55989]
 gi|238902342|ref|YP_002928138.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           BW2952]
 gi|256018846|ref|ZP_05432711.1| p-hydroxybenzoic acid efflux subunit AaeA [Shigella sp. D9]
 gi|256024185|ref|ZP_05438050.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia sp. 4_1_40B]
 gi|260846048|ref|YP_003223826.1| p-hydroxybenzoic acid efflux system component AaeA [Escherichia
           coli O103:H2 str. 12009]
 gi|260857361|ref|YP_003231252.1| p-hydroxybenzoic acid efflux system component AaeA [Escherichia
           coli O26:H11 str. 11368]
 gi|260869985|ref|YP_003236387.1| p-hydroxybenzoic acid efflux system component AaeA [Escherichia
           coli O111:H- str. 11128]
 gi|293449566|ref|ZP_06663987.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli B088]
 gi|300824393|ref|ZP_07104507.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           119-7]
 gi|300904434|ref|ZP_07122280.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           84-1]
 gi|300926016|ref|ZP_07141839.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           182-1]
 gi|300950379|ref|ZP_07164305.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           116-1]
 gi|300958721|ref|ZP_07170840.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           175-1]
 gi|301028721|ref|ZP_07191929.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           196-1]
 gi|301304295|ref|ZP_07210409.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           124-1]
 gi|301326324|ref|ZP_07219694.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           78-1]
 gi|301645528|ref|ZP_07245462.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           146-1]
 gi|307139929|ref|ZP_07499285.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli H736]
 gi|309793818|ref|ZP_07688244.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           145-7]
 gi|331643940|ref|ZP_08345071.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli H736]
 gi|331670064|ref|ZP_08370909.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli TA271]
 gi|331679315|ref|ZP_08379987.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli H591]
 gi|332279930|ref|ZP_08392343.1| p-hydroxybenzoic acid efflux system component [Shigella sp. D9]
 gi|1176207|sp|P46482|AAEA_ECOLI RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|123146653|sp|Q0T047|AAEA_SHIF8 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|167017126|sp|A7ZSD5|AAEA_ECO24 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|226706821|sp|B1XHL3|AAEA_ECODH RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|254801256|sp|B7LHU9|AAEA_ECO55 RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|259709953|sp|C4ZSX9|AAEA_ECOBW RecName: Full=p-hydroxybenzoic acid efflux pump subunit AaeA;
           Short=pHBA efflux pump protein A
 gi|606180|gb|AAA58043.1| ORF_f310 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789637|gb|AAC76273.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           str. K-12 substr. MG1655]
 gi|85676034|dbj|BAE77284.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           str. K12 substr. W3110]
 gi|110616651|gb|ABF05318.1| putative membrane protein [Shigella flexneri 5 str. 8401]
 gi|157077267|gb|ABV16975.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           E24377A]
 gi|169890607|gb|ACB04314.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           str. K-12 substr. DH10B]
 gi|190901788|gb|EDV61541.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           B7A]
 gi|192927013|gb|EDV81636.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           E22]
 gi|192956364|gb|EDV86824.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           E110019]
 gi|194412819|gb|EDX29111.1| p-hydroxybenzoic acid efflux pump subunit aaeA [Escherichia coli
           B171]
 gi|218353672|emb|CAU99912.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           55989]
 gi|238862069|gb|ACR64067.1| p-hydroxybenzoic acid efflux system component [Escherichia coli
           BW2952]
 gi|257756010|dbj|BAI27512.1| p-hydroxybenzoic acid efflux system component AaeA [Escherichia
           coli O26:H11 str. 11368]
 gi|257761195|dbj|BAI32692.1| p-hydroxybenzoic acid efflux system component AaeA [Escherichia
           coli O103:H2 str. 12009]
 gi|257766341|dbj|BAI37836.1| p-hydroxybenzoic acid efflux system component AaeA [Escherichia
           coli O111:H- str. 11128]
 gi|260447731|gb|ACX38153.1| efflux transporter, RND family, MFP subunit [Escherichia coli DH1]
 gi|291322656|gb|EFE62085.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli B088]
 gi|299878267|gb|EFI86478.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           196-1]
 gi|300314631|gb|EFJ64415.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           175-1]
 gi|300403596|gb|EFJ87134.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           84-1]
 gi|300417960|gb|EFK01271.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           182-1]
 gi|300450280|gb|EFK13900.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           116-1]
 gi|300523122|gb|EFK44191.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           119-7]
 gi|300840421|gb|EFK68181.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           124-1]
 gi|300846968|gb|EFK74728.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           78-1]
 gi|301076212|gb|EFK91018.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           146-1]
 gi|308122775|gb|EFO60037.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           145-7]
 gi|315137826|dbj|BAJ44985.1| p-hydroxybenzoic acid efflux subunit AaeA [Escherichia coli DH1]
 gi|315257166|gb|EFU37134.1| efflux transporter, RND family, MFP subunit [Escherichia coli MS
           85-1]
 gi|315617052|gb|EFU97662.1| uncharacterized protein ydhJ [Escherichia coli 3431]
 gi|323154451|gb|EFZ40652.1| hypothetical protein ECEPECA14_3755 [Escherichia coli EPECa14]
 gi|323162928|gb|EFZ48763.1| hypothetical protein ECE128010_0890 [Escherichia coli E128010]
 gi|323173501|gb|EFZ59130.1| hypothetical protein ECLT68_1816 [Escherichia coli LT-68]
 gi|323178589|gb|EFZ64165.1| hypothetical protein ECOK1180_2320 [Escherichia coli 1180]
 gi|323183002|gb|EFZ68401.1| hypothetical protein ECOK1357_3610 [Escherichia coli 1357]
 gi|323946911|gb|EGB42927.1| HlyD family protein secretion protein [Escherichia coli H120]
 gi|331037411|gb|EGI09635.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli H736]
 gi|331062977|gb|EGI34891.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli TA271]
 gi|331073380|gb|EGI44703.1| P-hydroxybenzoic acid efflux pump subunit AaeA (pHBA efflux
           pumpprotein A) [Escherichia coli H591]
 gi|332102282|gb|EGJ05628.1| p-hydroxybenzoic acid efflux system component [Shigella sp. D9]
 gi|332998362|gb|EGK17961.1| hypothetical protein SFVA6_4165 [Shigella flexneri VA-6]
          Length = 310

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 60/171 (35%), Gaps = 14/171 (8%)

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLR-HINELYDEANLEFANYLKEISRDLEQNQR 271
           Q  L + +  V    +  +E   E     R  +  +  E   +  N L+ +   L + Q 
Sbjct: 84  QKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQANNVLQTVLHQLAKAQA 143

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIR 331
           T         + +   E+  I +P  G +     ++   +  +    + +V  +   Y+ 
Sbjct: 144 TR-------DLAKLDLERTVIRAPADGWVTNLNVYT-GEFITRGSTAVALVKQNS-FYVL 194

Query: 332 AKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQ 382
           A +   +++ V+ GY A +          K  K  ++ +   ++   +   
Sbjct: 195 AYMEETKLEGVRPGYRAEIT----PLGSNKVLKGTVDSVAAGVTNASSTRD 241



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 48/154 (31%), Gaps = 5/154 (3%)

Query: 7   KNLKRNHPASLKRMTLLSIIGIIGLITWSILLPIEISVSSSGEILNEDNVVEIKSPFSGI 66
           K L R    +   + L+ +  I     W            + +     +VV I    SG+
Sbjct: 2   KTLIRKFSRTAITVVLVILAFIAIFNAWVYYTE----SPWTRDARFSADVVAIAPDVSGL 57

Query: 67  IKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDV 126
           I +  V +   + +G  L T +       ++  +  +   +  +  EK       N+  V
Sbjct: 58  ITQVNVHDNQLVKKGQILFTIDQPRYQKALEEAQADVAYYQV-LAQEKRQEAGRRNRLGV 116

Query: 127 LEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
              + E  ++         H          ++ +
Sbjct: 117 QAMSREEIDQANNVLQTVLHQLAKAQATRDLAKL 150


>gi|325578274|ref|ZP_08148409.1| macrolide-specific efflux protein MacA [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325160010|gb|EGC72139.1| macrolide-specific efflux protein MacA [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 393

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 91/276 (32%), Gaps = 47/276 (17%)

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLE-NKSSLLRALLSSHQKDLTMMKNLFEKNAVSQND 215
           I+ +Y  L  ++ +   I       + N  +  +A L S+Q  L   K  ++    S N 
Sbjct: 68  ITKLYAKLGQEIKKGEMIADIDSTTQINTLNTKKAALVSYQAQLKAKKTAYDIALSSYNR 127

Query: 216 LNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFAD 275
           L++       S   +        N    +  +  EAN++ A                   
Sbjct: 128 LSKLYLQKATSLDSVNTAKSTLDNAKAEMEAI--EANIKQAEI----------------- 168

Query: 276 EMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSK--LTYIRAK 333
              ++   E       I +P+ GT++     S       +Q    IV  +      I+ +
Sbjct: 169 ---EVNTAETNVGYTKITAPMDGTVISVPV-SEGQTVNANQTAPTIVTIADLSKMKIKPE 224

Query: 334 VTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDP-------------IISQQDNN 380
           ++   I  VK G    V F   +D +   + ++I+ +DP               S   ++
Sbjct: 225 ISEGDITKVKAGQ--EVSFTILSDSQT-VYHSVIDSVDPANTTTSDSSSTSSSTSSSSSS 281

Query: 381 LQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLFT 416
             +  YY   + I      + +  LR G   E    
Sbjct: 282 TTSAIYYYANVLID-----NPDRTLRIGMTTENNIK 312



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 58/133 (43%), Gaps = 2/133 (1%)

Query: 38  LPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLID 97
             +E +V +SG +    N V++ +  SG I K   + G +I +G  +   +     + ++
Sbjct: 40  GNVEKTVIASGSVE-SVNEVDVGAQASGKITKLYAKLGQEIKKGEMIADIDSTTQINTLN 98

Query: 98  LKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLD-FLGKYHSTCSKVFNYG 156
            KK ++ + +  +  +K+A D   + Y+ L K +  +   L      K     +K     
Sbjct: 99  TKKAALVSYQAQLKAKKTAYDIALSSYNRLSKLYLQKATSLDSVNTAKSTLDNAKAEMEA 158

Query: 157 ISSVYRSLKMKLT 169
           I +  +  ++++ 
Sbjct: 159 IEANIKQAEIEVN 171


>gi|109074411|ref|XP_001095126.1| PREDICTED: coiled-coil domain-containing protein 158-like isoform 1
           [Macaca mulatta]
 gi|297292674|ref|XP_002804119.1| PREDICTED: coiled-coil domain-containing protein 158-like isoform 2
           [Macaca mulatta]
          Length = 1113

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 76/224 (33%), Gaps = 13/224 (5%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFE 132
             G      + L+ FE+     + +   +S  + R         L  L+ +   L+    
Sbjct: 182 HEGVLQEIRSILVDFEEASGKKIYEHDSMSTLHFRSLGSAISKILRELDTEISFLKGRIF 241

Query: 133 SREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALL 192
             E+QL     +  +    +       + + +      +  +        ++++ +++ +
Sbjct: 242 PVEDQLEALKSESQNKMELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQM 301

Query: 193 SSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE-------NIHEQKNMLRHIN 245
              Q+      +++ +       L+  E  V +   ELRE        I E +  L   N
Sbjct: 302 EIIQEQARNQNSMYMR------QLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLAN 355

Query: 246 ELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
               EA  E   + +E     +Q Q+  AD   +   L   +EQ
Sbjct: 356 SELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQ 399


>gi|37680910|ref|NP_935519.1| membrane-fusion protein [Vibrio vulnificus YJ016]
 gi|37199660|dbj|BAC95490.1| membrane-fusion protein [Vibrio vulnificus YJ016]
          Length = 364

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 84/254 (33%), Gaps = 25/254 (9%)

Query: 171 MRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKN-AVSQNDLNQQERIVYKSTLE 229
           +       +DL  +++  R      +    +++   EK  AV +  +     I+ K  L+
Sbjct: 59  LAQPTARSIDLYGRTAPNRQARLGAEIAGKIVRLEVEKGQAVRKGQVIA---IIDKRDLD 115

Query: 230 LRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQ 289
            R    ++   +  +     +A     +   +        +    D  + L  +E     
Sbjct: 116 YR---LQRAKAMLEVKLKEFKAAQSLKSRGLQGEVAFATAEAALVDAKANLNNVETELSN 172

Query: 290 KTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTAT 349
             +  P  G I+ ++     ++     P+  ++   +   I A V+ + +QH+     A 
Sbjct: 173 TEVRVPFDG-ILDSRFVEVGDFVGIGDPVATVI-DLQKLVIEADVSERHVQHLAAKQMAQ 230

Query: 350 VRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGF 409
           VR      I  +  +  I  +  + S   N               ++   ++   +  G 
Sbjct: 231 VRL-----ISGQLLQGAIRYVGQVSSPSTNTF-----------PIEIEVDNSQHRIPAGV 274

Query: 410 PAEVLFTAKNTTLA 423
            AEV  T   T+  
Sbjct: 275 SAEVQLTLDQTSAI 288



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 55/153 (35%), Gaps = 5/153 (3%)

Query: 65  GIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKY 124
           G I + +VE G  + +G  +   +       +D +    K +      E  A   L ++ 
Sbjct: 87  GKIVRLEVEKGQAVRKGQVIAIID----KRDLDYRLQRAKAMLEVKLKEFKAAQSLKSRG 142

Query: 125 DVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
              E AF + E  L+D     ++  +++ N  +   +  +          ++   D    
Sbjct: 143 LQGEVAFATAEAALVDAKANLNNVETELSNTEVRVPFDGILDSRFVEVGDFVGIGDPVAT 202

Query: 185 SSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
              L+ L+         +++L  K  ++Q  L 
Sbjct: 203 VIDLQKLVIEADVSERHVQHLAAKQ-MAQVRLI 234


>gi|33863884|ref|NP_895444.1| hypothetical protein PMT1617 [Prochlorococcus marinus str. MIT
           9313]
 gi|33635467|emb|CAE21792.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
           9313]
          Length = 375

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/155 (13%), Positives = 51/155 (32%), Gaps = 11/155 (7%)

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEI------SRDLEQNQRTFADEMSKLTILEKT 286
           +  + +  L        +  L +  Y   +      + D ++ +  +     K+   E T
Sbjct: 103 DQAQIRAELADFKAQEQKNKLNWQRYEFLVPQGAASALDRDEYKAQYIASREKVKATEAT 162

Query: 287 REQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGY 346
                + SPI+G +         +  +   P  K++  +   + R +V       +K G 
Sbjct: 163 LAYSNLRSPISGIVADVDV-KVGDVIRSGDPFTKLI-RNNRLFARVEVPATFSDRIKIGL 220

Query: 347 TATVRFPHYADIREKKFKAIIEKIDPIISQQDNNL 381
              +     +D+        I  + P +++    L
Sbjct: 221 PVFLNKTGSSDVMA---TGEINSVGPTVNRTTQGL 252



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 37/106 (34%), Gaps = 4/106 (3%)

Query: 64  SGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK 123
           SG I + +++ G Q+  G  L+  +  +    +   K   +  + +        +FL  +
Sbjct: 79  SGRIIELKIDQGDQVQPGQMLVVLDQAQIRAELADFKAQEQKNKLN----WQRYEFLVPQ 134

Query: 124 YDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT 169
                   +  + Q +    K  +T + +    + S    +   + 
Sbjct: 135 GAASALDRDEYKAQYIASREKVKATEATLAYSNLRSPISGIVADVD 180


>gi|281338438|gb|EFB14022.1| hypothetical protein PANDA_002236 [Ailuropoda melanoleuca]
          Length = 631

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 73/209 (34%), Gaps = 9/209 (4%)

Query: 80  QGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL 139
           +   LL  + ++      L+++ +         E+   +    +     +  ++ E QL 
Sbjct: 343 KEEELLRLQQLQEEKERKLQELELLQ-EAQRQAERLLQEEEARRRSQHRELQQALEGQLR 401

Query: 140 DFLGKYHSTCSKV-FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLR-----ALLS 193
           +      S  +++      ++  R    +L  M+      L LE K+         A   
Sbjct: 402 EAEQARASMQAEMELKKEEAARQRQRIQELEDMQQRLEEALHLEVKARRDEEAVRLAQTR 461

Query: 194 SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYD--EA 251
             Q++   +K L +     +  + + +R   +   E+ +     +   + + E+    + 
Sbjct: 462 LLQEEEEKLKQLLQLKEEHERYIERAQREKQELQQEMAQQSRSLQQAQQQLEEVRQNRQR 521

Query: 252 NLEFANYLKEISRDLEQNQRTFADEMSKL 280
             E     ++  R    N + +  +M++L
Sbjct: 522 ADEDVEAAQQKLRQASTNVKHWNVQMNRL 550


>gi|254488936|ref|ZP_05102141.1| transcriptional regulator, Fis family [Roseobacter sp. GAI101]
 gi|214045805|gb|EEB86443.1| transcriptional regulator, Fis family [Roseobacter sp. GAI101]
          Length = 391

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/247 (12%), Positives = 76/247 (30%), Gaps = 29/247 (11%)

Query: 158 SSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLN 217
           + V +   + L    ++ +     E + +  +A +   Q  +T  +    +         
Sbjct: 85  AQVAKGDVLALLNTDTLTVQVSQAEAEYARAQAGVRQAQSQITSAEASAAQAQSVLARNQ 144

Query: 218 QQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q ER    +   L +     +     +    D                LE  +       
Sbjct: 145 QLERSGNTTQAALDQASANAQTADAAVASAKD---------------GLEVARAQVLQAQ 189

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA-QQSQPLMKIVPHSKLTYIRAKVTP 336
           + L +     ++ TI +P AGT+   ++      A    +PL +++    +  ++A++  
Sbjct: 190 ASLDLARLNLDRATIKAPTAGTV-SARNAQLGAIATSSGEPLFRMI-QDGVIEVKAEIVE 247

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
             +  ++ G  A V  P             +  + P +   +          V + + D 
Sbjct: 248 TALAQIEPGDAAQVDIPG-----VGMVNGSVRLVSPTVDPVNRLGD------VRVSLDDG 296

Query: 397 AFSDNNI 403
                 +
Sbjct: 297 RTLRTGV 303



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 65/216 (30%), Gaps = 16/216 (7%)

Query: 35  SILLPIEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTD 94
           + +  I   V  SG +     V+         I+   V+ G+Q+ +G  L        T 
Sbjct: 44  AAIAEIVNRVPISGSLEAFREVLVYPQVSGFPIEVIMVDAGAQVAKGDVLALLNTDTLTV 103

Query: 95  LIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE---------EQLLDFLGKY 145
            +   +      +  +   +S +          +      +         +  LD     
Sbjct: 104 QVSQAEAEYARAQAGVRQAQSQITSAEASAAQAQSVLARNQQLERSGNTTQAALDQASAN 163

Query: 146 HSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
             T           +  +    L    S+ L RL+L+      RA + +        +N 
Sbjct: 164 AQTADAAVASAKDGLEVARAQVLQAQASLDLARLNLD------RATIKAPTAGTVSARN- 216

Query: 206 FEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
            +  A++ +      R++    +E++  I E     
Sbjct: 217 AQLGAIATSSGEPLFRMIQDGVIEVKAEIVETALAQ 252


>gi|74317102|ref|YP_314842.1| HlyD family secretion protein [Thiobacillus denitrificans ATCC
           25259]
 gi|74056597|gb|AAZ97037.1| HlyD family secretion protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 356

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 70/212 (33%), Gaps = 9/212 (4%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR-DLEQN 269
           +S   L +QE +V K  +   + + E +  L        +   E A       R +    
Sbjct: 152 LSAAHLARQEALVAKGFIS-AQALDEARAQLARDEASVAQTRAELATARLPGRRDERAGA 210

Query: 270 QRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTY 329
           +   +   + L       EQK+  +P+ G++     F    +A   Q ++ I+P      
Sbjct: 211 RAAVSASQAALEQSAIRLEQKSQRAPVGGSVQDV-FFRVGEWATPGQAVVSILPPQN-IK 268

Query: 330 IRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQ-EYYE 388
           +R  +   ++  ++ G    +      D       A I  +          L ++   + 
Sbjct: 269 VRFFIPEPRLGALRTGQGVAIH----CDGCGAGIPATIRFVSASAEYTPPVLYSEKNRHR 324

Query: 389 VILKITDLAFSDNNIELRNGFPAEVLFTAKNT 420
           ++  +     + +   L  G P  V   +   
Sbjct: 325 LVYLVEAWPAAGDAARLHPGQPVSVALDSGKR 356


>gi|71736165|ref|YP_275459.1| HlyD family secretion protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71556718|gb|AAZ35929.1| HlyD family secretion protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 294

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/216 (11%), Positives = 68/216 (31%), Gaps = 19/216 (8%)

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
           + Q+      R    +  E +E   + +   +         NL     L+E      +  
Sbjct: 78  IDQDRFRLALRQAQATVAERQETWEQARRENKR---NRGLGNLVAREQLEESQSREARAL 134

Query: 271 RTFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYI 330
               +    +   +   ++  I SP+ G  + +++     +    +P++ +V  +   +I
Sbjct: 135 SALGESKVAVDAAQLNLDRSVIRSPVDGY-LNDRAPRDHEFVTAGRPVLSVV-DAASFHI 192

Query: 331 RAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKID-----------PIISQQDN 379
                  ++  +  G    +R             +I+  I+           P ++   +
Sbjct: 193 DGYFEETKLDGIHVGQGVDIRVIGDNARLTGHVVSIVAGIEDRDRSSGSNLLPNVNPAFS 252

Query: 380 NLQTQEYYEVILKITDLAFSDNNIELRNGFPAEVLF 415
            ++  +   V +   D+     +  +  G  A V  
Sbjct: 253 WVRLAQRIPVRIAFDDV---PADFRMIAGRTATVSI 285



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 45/119 (37%), Gaps = 6/119 (5%)

Query: 55  NVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEK 114
           ++V+I    SG+I+K  V +   + +G  L T +       +   + ++   +   +  +
Sbjct: 46  DIVQIAPDVSGLIQKVDVTDNQPVHKGQVLFTIDQDRFRLALRQAQATVAERQETWEQAR 105

Query: 115 SALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
                     +++ +      EQL +   +     S +    ++     L +  + +RS
Sbjct: 106 RENKRNRGLGNLVAR------EQLEESQSREARALSALGESKVAVDAAQLNLDRSVIRS 158


>gi|330810539|ref|YP_004355001.1| Acriflavine resistance protein A [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378647|gb|AEA69997.1| Acriflavine resistance protein A [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 397

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 65/186 (34%), Gaps = 6/186 (3%)

Query: 58  EIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSAL 117
           EI+    GI+++     G+++  G  L   +       +   + ++   R  + + ++  
Sbjct: 68  EIRPQVGGIVQQRLFVEGAEVKAGQALYQLDASSYKAALAEAQANLAKARATLKSAQATA 127

Query: 118 DFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLN 177
                +   L K     ++   D      +  ++V           + +  TR+ S    
Sbjct: 128 K----RDAQLVKIDAISQQDNEDAQASLLTAEAEVQVAQADVDTARINLAYTRISSPVSG 183

Query: 178 RLDLENKS--SLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIH 235
           R++    +  +L+ A   S    +  +  ++     S  +L + +R +    L+      
Sbjct: 184 RIETSTVTPGALVVANQDSALTTVQQLDPMYVDVTQSTTELLRLKRDLASGVLQSNGEGE 243

Query: 236 EQKNML 241
            + ++ 
Sbjct: 244 ARISLK 249


>gi|300175238|emb|CBK20549.2| unnamed protein product [Blastocystis hominis]
          Length = 1416

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 93/221 (42%), Gaps = 17/221 (7%)

Query: 77   QILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNK---YDVLEKAFES 133
            Q+      LT ++ +    I+  + ++   +  + T K  +D L  +    D LE+   S
Sbjct: 1112 QVESLQQSLTGDNTKAQKQIESLQQTVSQQKSDLKTMKKEMDELKKRSVLADELEQTVNS 1171

Query: 134  REEQLLDFLGKYHSTCSKVF---------NYGISSVYRSLKMKLTRMRSIYLNRLDLENK 184
             ++Q+ +   +   +  +              ++ V + L+   +++  +  +    E++
Sbjct: 1172 SKQQIAELKKEQQESQKREEALQSKLEEKEESLADVQKKLESTQSKLSEVKDSLKSTESR 1231

Query: 185  SSLLRALLSSHQKDLTMMKN-LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRH 243
             S  +AL SS +  L  MKN L    A SQ+ +  QE+ +     E+     E+ N+   
Sbjct: 1232 LSEEQALGSSMRTQLESMKNTLQGDTAKSQSIIESQEKQLASLRAEMDSVKTERSNLETK 1291

Query: 244  INELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILE 284
            I  L  ++    A    ++ + L+Q++   +   ++L  L+
Sbjct: 1292 IAALQKDSTQRVA----DLEKSLQQSESKVSSLQTELESLQ 1328



 Score = 40.4 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 70/200 (35%), Gaps = 10/200 (5%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           ET   ++     +++ R  +++    L+   +       A E  E++L +      +T +
Sbjct: 312 ETQKQLESTSNDLESTRAQLESTAKDLEATKSTLADTTAAKEDTEKRLEETKQTLEATQT 371

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
                  ++  +SL+   ++         + +N+   L+   S   +  +      E   
Sbjct: 372 -----AKAATEKSLEAMTSKQEETASALANTQNELKTLQKSSSEEIEAKSQCIKQLESQL 426

Query: 211 VS-QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQN 269
            S Q  L+Q      +   EL   +   ++ L ++        L       E    ++Q 
Sbjct: 427 QSVQTSLDQLTEASAQQIGELSSTVSSLEDSLSNVKNEL----LAEQGKRSEAEATIQQQ 482

Query: 270 QRTFADEMSKLTILEKTREQ 289
            +  A+   +L   E T +Q
Sbjct: 483 LKRIAELEEELHKTEGTLDQ 502



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 66/204 (32%), Gaps = 5/204 (2%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
            D    D+I   K  + +L+  ++ E++    L +    L  A    +E            
Sbjct: 917  DSSPDDIIQSIKAEVGSLQQQLEAERNVTSELRHVETDLSAALLREKELEKKLAEATEEH 976

Query: 149  CSKVFNY--GISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
              +V N    I+ +  S+         +     +L  +   L+   S  +      K L 
Sbjct: 977  EKEVLNATSAIAELNESVNSFKKEKSELSKQCEELNARVKSLQTTESELETSKKHEKELE 1036

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA---NYLKEIS 263
             +    +    +          ELR+++      L    +  +++  + A   +    + 
Sbjct: 1037 TQIEQLKESALKSSAAATALEGELRQSLETANQELAQTQKKLEKSQEKVATLESESSSLQ 1096

Query: 264  RDLEQNQRTFADEMSKLTILEKTR 287
              LE +Q        ++  L+++ 
Sbjct: 1097 SKLESSQSNEELLRKQVESLQQSL 1120



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 77/211 (36%), Gaps = 16/211 (7%)

Query: 94   DLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF---ESREEQLLDFLGKYHSTCS 150
            + ++ +  S++     ++T K     L  + + L+++     +    L   L +   T +
Sbjct: 1009 EELNARVKSLQTTESELETSKKHEKELETQIEQLKESALKSSAAATALEGELRQSLETAN 1068

Query: 151  KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSS---LLRALLSSHQKDLTMMKNLFE 207
            +        + +S +   T        +  LE+  S   LLR  + S Q+ LT      +
Sbjct: 1069 QELAQTQKKLEKSQEKVATLESESSSLQSKLESSQSNEELLRKQVESLQQSLTGDNTKAQ 1128

Query: 208  KNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE------ 261
            K   S      Q++   K+  +  + + ++  +   + +  + +  + A   KE      
Sbjct: 1129 KQIESLQQTVSQQKSDLKTMKKEMDELKKRSVLADELEQTVNSSKQQIAELKKEQQESQK 1188

Query: 262  ----ISRDLEQNQRTFADEMSKLTILEKTRE 288
                +   LE+ + + AD   KL   +    
Sbjct: 1189 REEALQSKLEEKEESLADVQKKLESTQSKLS 1219


>gi|258564324|ref|XP_002582907.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237908414|gb|EEP82815.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 1261

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/224 (11%), Positives = 64/224 (28%), Gaps = 12/224 (5%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                 +  +  +  L   +   +  L  L    +      +  + Q+     KY    +
Sbjct: 721 RKGAEEETLQGQLAGLEQRLAYGRDELKALERNLESKANELDHAKRQVESVQPKYREKLN 780

Query: 151 --KVFNYGISSVYRSLKMKLTR------MRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             +  N  I  +  S+             R  Y N  + E +   L+   +  + + T  
Sbjct: 781 SLEELNSSIQELQESVSGVEDEVYRKFCRRLGYKNIREYELQQGTLQQEAAEKKLEFTTQ 840

Query: 203 KNLFEKNA-VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
           ++  E      +  L   E  +     +   +      +     E       +    +  
Sbjct: 841 RSKIENQLSFEKQRLQGTEDRIKGLRTQENRDQALIAELEAE-RETIQNRRDQLNAEIDL 899

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIAGTIVYNQS 305
           +   LE+ +  F++   +L    +   ++     + GT+     
Sbjct: 900 LQEQLEEQRTRFSESAERLNDQRREAAKRNKN--VEGTLKAINV 941



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 48/156 (30%), Gaps = 4/156 (2%)

Query: 122 NKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDL 181
            +    +K   + +   ++    +     +     I  +          +  +   R  +
Sbjct: 827 QQEAAEKKLEFTTQRSKIENQLSFEKQRLQGTEDRIKGLRTQENRDQALIAELEAERETI 886

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNML 241
           +N+   L A +   Q+ L   +  F +   S   LN Q R   K    +   +     + 
Sbjct: 887 QNRRDQLNAEIDLLQEQLEEQRTRFSE---SAERLNDQRREAAKRNKNVEGTLKAINVLE 943

Query: 242 RHINE-LYDEANLEFANYLKEISRDLEQNQRTFADE 276
             +     D   L     L++I   L+++  +    
Sbjct: 944 SDVQRHSSDRYALLRRCKLEDIDIPLKEDSTSLDQL 979


>gi|254476114|ref|ZP_05089500.1| conserved hypothetical protein [Ruegeria sp. R11]
 gi|214030357|gb|EEB71192.1| conserved hypothetical protein [Ruegeria sp. R11]
          Length = 319

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/208 (11%), Positives = 64/208 (30%), Gaps = 18/208 (8%)

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
           R  +++      +      L  + +  R       ++      L    +V Q        
Sbjct: 3   RMERVQTLAREVLEAQLSGLRGELAAARERQDRLAREALRFTQLSANGSVPQAQAETAVS 62

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYD---------------EANLEFANYLKEISRDL 266
           +  ++  E+       +  +R I  + D               +   E A  L ++    
Sbjct: 63  LAAEANGEVIRLTAAVEETVRSIAGIQDGILPGLGTEDGSYARQRRDEVAIRLADLKGRK 122

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILSP--IAGTIVYNQSFSSSNYAQQSQPLMKIVPH 324
            +        + ++  L +   +    +P    G +V++ + +          +++++  
Sbjct: 123 ARIAAQRVGLLQEIEALREEVGRFDRFAPRLPTGAVVWSATPAKGAVIASGDEVLQLL-D 181

Query: 325 SKLTYIRAKVTPKQIQHVKKGYTATVRF 352
               ++   V     + ++ G TA VR 
Sbjct: 182 CSRRFVEVFVHETAFEAIRPGDTARVRL 209


>gi|198476492|ref|XP_001357374.2| GA17472 [Drosophila pseudoobscura pseudoobscura]
 gi|198137721|gb|EAL34443.2| GA17472 [Drosophila pseudoobscura pseudoobscura]
          Length = 1601

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 75/243 (30%), Gaps = 24/243 (9%)

Query: 76  SQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESRE 135
             +      L     E        K   + LR      ++ +  L       E+   +R 
Sbjct: 727 DSVASDELPLLVVPEELLQPDRELKQQCETLRAEATLREARMSELLTTLQRTEQQLTARL 786

Query: 136 EQLLDFLGKYHSTCSKVFNY--------------GISSVYRSLKMKLTRMRSIYLNRLDL 181
           ++    L    +   +                   I  +   L   +    S+Y    +L
Sbjct: 787 QEQQQQLNGELAQAKQSAAELMHSLSLQLSDSQCKIKQLEDRLAQGIEENESLYKRLREL 846

Query: 182 ENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERI-VYKSTLELREN------- 233
           + + S + +L +  +  +  M +L +   +S  D    +R  + +   ELR         
Sbjct: 847 QAEGSQVASLSNLQRHKMKRMDSLSDLTTISDIDPYCLQRDSLAEEYNELRSRFEKAVNE 906

Query: 234 IHEQKNMLRHINELYDEANLEFANYLKEISR-DLEQ-NQRTFADEMSKLTILEKTREQKT 291
           I   K  L+     YD   L  A   +++ R  LE   Q        +   L+ +  ++ 
Sbjct: 907 IRAMKRELKQSQNQYDALELAQAALQQKLERCQLEDGAQLQLMAARIQDLTLKYSSSERQ 966

Query: 292 ILS 294
           + +
Sbjct: 967 VRA 969



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 67/192 (34%), Gaps = 16/192 (8%)

Query: 91   ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
                 I+  +   K LR  +  E S +  L+N    L++    R + L D          
Sbjct: 828  RLAQGIEENESLYKRLR-ELQAEGSQVASLSN----LQRHKMKRMDSLSDLTTISDIDPY 882

Query: 151  KVFNYGISSVYRSLKMK----LTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             +    ++  Y  L+ +    +  +R++       +N+   L    ++ Q+ L   +   
Sbjct: 883  CLQRDSLAEEYNELRSRFEKAVNEIRAMKRELKQSQNQYDALELAQAALQQKLERCQ--L 940

Query: 207  EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
            E  A     L      +   TL+   +  + + + + + +     +L      +++   L
Sbjct: 941  EDGA----QLQLMAARIQDLTLKYSSSERQVRALKQKLAKSERRRSLSLKG-KEQLELKL 995

Query: 267  EQNQRTFADEMS 278
             + QR   +  S
Sbjct: 996  SELQRETIERKS 1007


>gi|281358792|ref|ZP_06245267.1| efflux transporter, RND family, MFP subunit [Victivallis vadensis
           ATCC BAA-548]
 gi|281314747|gb|EFA98785.1| efflux transporter, RND family, MFP subunit [Victivallis vadensis
           ATCC BAA-548]
          Length = 396

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/181 (10%), Positives = 66/181 (36%), Gaps = 5/181 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
           +   G +       +I S  SG I +  V  G ++ +G  L   + +   + +  ++  +
Sbjct: 52  IPIQGNVE-SQQSADISSRTSGNIDQIPVGEGDRVKKGQLLFEIDRVNLENNVKAQQEKV 110

Query: 104 KNLRC--HIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
                   I    + L     +   ++     + +         +      ++  ++++ 
Sbjct: 111 AVTEADYKIARINAELAETVRQKAKIDYDRALQLKSSNAISQDAYENAKLKYDEAVANIA 170

Query: 162 RSLKMKLTRMRSIYLNRLDLEN-KSSLLRALLSSHQKDLTMMKNLFEKNAVSQ-NDLNQQ 219
           ++       +  +   + +LE  + +L  +++ S  + + ++K++     V   + + + 
Sbjct: 171 KTQAQSNYALAQLNQEKANLEICRKTLADSIVKSPFEGVVVVKDMDPDEYVQTGSRILRL 230

Query: 220 E 220
           E
Sbjct: 231 E 231


>gi|85704669|ref|ZP_01035771.1| hypothetical protein ROS217_06304 [Roseovarius sp. 217]
 gi|85671077|gb|EAQ25936.1| hypothetical protein ROS217_06304 [Roseovarius sp. 217]
          Length = 396

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 4/128 (3%)

Query: 47  SGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKNL 106
           SG +   D V  I+S  SG I+      GS +  G  L T +       +      +   
Sbjct: 67  SGRLEAVDRVQ-IRSRVSGTIQSVDFREGSYVKAGDLLFTIDPEPFETAVTRHDGQVALA 125

Query: 107 RCHIDTEKSALDF---LNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRS 163
           +  +D  +  LD    L     + +   + R+  +L       +  + + +  +   Y  
Sbjct: 126 KAQLDLAQLELDRGAKLIKNRTIPQSVLDQRQNTVLQAQANLRTATAALRSANLELGYTQ 185

Query: 164 LKMKLTRM 171
           ++  ++  
Sbjct: 186 VRAPISGR 193


>gi|125777019|ref|XP_001359468.1| GA19880 [Drosophila pseudoobscura pseudoobscura]
 gi|54639212|gb|EAL28614.1| GA19880 [Drosophila pseudoobscura pseudoobscura]
          Length = 602

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 72/211 (34%), Gaps = 13/211 (6%)

Query: 112 TEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLT-- 169
            E+ A++        LE+A ++ +        +     SK+      + Y +   +    
Sbjct: 43  AERKAMEAYRFDSSALERAADAAKTLERSKHAREALELSKMQESTRQAEYSTKVKEYEAH 102

Query: 170 -RMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTL 228
                +   R+D E +   L       Q+       L  K    ++ L QQ+R+  ++  
Sbjct: 103 IEQAKVEQRRIDHEERRKTLIEETKQQQQRAQYQDQLSRKRY--EDQLVQQQRVQEENLR 160

Query: 229 ELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTRE 288
           +  E++  Q+ M R   E   E  ++  N LK +  +L   +     E   L + +   +
Sbjct: 161 KQEESVQRQEAMRRQTIE--HEIEMKEKNRLKLLEHELR-AKARVDRENRDLNLEKIRLK 217

Query: 289 QKTILSPIAGTIVYNQSFSSSNYAQQSQPLM 319
            +        T V     ++ +        M
Sbjct: 218 AQEHR-----TTVMEGIKTAGSVIGAGAEAM 243


>gi|324502119|gb|ADY40933.1| Major antigen [Ascaris suum]
          Length = 751

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 18/211 (8%)

Query: 85  LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGK 144
              +       I      IK+LR   +  ++    L  + +V + +    E ++ D  G+
Sbjct: 526 FELQARGKEAQIRHLNDQIKSLRTEAENAQAEARSLREREEVWDTSKFKLESKMRDHEGE 585

Query: 145 YH--STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQK-DLTM 201
               S     F     S+  S+K   +++++      DL +    L+  LS  +  ++ +
Sbjct: 586 SQRVSILMSSFETERQSLNESVKKLASQLQASEGKNADLRDDVEKLKRDLSKAESLEVEL 645

Query: 202 MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            ++L EK  V+Q                LRE +   K+ L + N    +   E      E
Sbjct: 646 RRSLEEKTRVAQ------------DASGLREQLSIAKSDLANANSRKQQLESELLTVRSE 693

Query: 262 ISRD---LEQNQRTFADEMSKLTILEKTREQ 289
           +      L       +D   +L   +  + +
Sbjct: 694 LREQKQHLNDASNRLSDLQRQLVDAQNEKNR 724


>gi|323188924|gb|EFZ74208.1| hlyD family secretion family protein [Escherichia coli RN587/1]
          Length = 355

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 63/178 (35%), Gaps = 4/178 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           E    S+G I   +  V+I S  +G I    V+ G  + +G  L   +     +      
Sbjct: 34  EGFAVSNGRIEATE--VDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAI 91

Query: 101 VSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSV 160
             IK  +  +   ++ L+   ++    +     R+ +L     ++  + S      IS+ 
Sbjct: 92  AQIKEAQSAVAAAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHTRSRSLAQRGAISA- 150

Query: 161 YRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
            + L        S        + + S  +A + + + ++ + +   E    ++  +  
Sbjct: 151 -QQLDDDRAAAESARAALESAKAQVSASKAAIEAARTNIILAQTRVEAAQATERRIAA 207


>gi|313231795|emb|CBY08908.1| unnamed protein product [Oikopleura dioica]
          Length = 1493

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 74/224 (33%), Gaps = 7/224 (3%)

Query: 73  ENGSQILQGTPLLTFEDIETTDLIDLK-KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF 131
           +   ++ +G   +  ++I     +  K +  I  L   I+ EK        ++   ++  
Sbjct: 32  QERERVKKGMREMVDKEIAKRADVKRKYETRISQLLETIEAEKENFSGKQTEFSNYQRKL 91

Query: 132 ESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRAL 191
             +  +L       +    ++    +       +  L   +++  +   LEN++  L++ 
Sbjct: 92  REQSLELEQTTNDKNQLNRQI--SQLQDEINDHEQNLRNFQTLQKDYKSLENRNIRLQSK 149

Query: 192 LSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
           L            L +   VS+ D   +   + K   E      +   M    +E+    
Sbjct: 150 LDEINSIKQERDELAQNLLVSEADARSKRDQLEKIRAEHEFAKTKCAKMKSEYDEVIKRE 209

Query: 252 NLEFANY----LKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                N     ++E  + +   + T  ++   L  L+    Q +
Sbjct: 210 RANVENRSDAVIREYEQQINDLENTIDEQNRDLKQLQAQVRQIS 253



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 69/198 (34%), Gaps = 11/198 (5%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
            +  +I   +  I +L   ID +   L  L  +   + K  +  + QL     K  +   
Sbjct: 216 RSDAVIREYEQQINDLENTIDEQNRDLKQLQAQVRQISKESDEYQSQLTIANEKIRTLEW 275

Query: 151 KVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNA 210
             +      +    + +  + + +     ++E++  +L+A L++   +L  +K +     
Sbjct: 276 D-YKQTKKELDSMKRAQSNQAQDLEHKISEIEDERDVLKANLNAKTSELGQLKTILTNTE 334

Query: 211 VSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             ++++ +Q          L     E  ++ R  +    +     A     +     +NQ
Sbjct: 335 DDRDEIVRQ----------LSALREEHSHLRREHDSRQKKEFESVAGQKVRVEELKIENQ 384

Query: 271 RTFADEMSKLTILEKTRE 288
           R   D  S    LE   +
Sbjct: 385 RLNRDINSLSQQLEDKSQ 402



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 71/180 (39%), Gaps = 4/180 (2%)

Query: 102 SIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVY 161
           ++ NL   +  +++ +  L ++  + EK  ++ E+ +++   +  +  ++       +  
Sbjct: 630 AVDNLEDEVTEKETEVQKLEHELRLGEKERKNFEKVVIEERARAEAVEAEFNVRNRQTND 689

Query: 162 RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQER 221
             LK++        + R +   +  L++       ++  + K L  K      +++Q   
Sbjct: 690 DDLKIETLEEEIEQIERRNAREREKLVQENQLLSAQNKDLNKKLRRK----DEEIDQIFE 745

Query: 222 IVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLT 281
              +    ++E+  +   ++R + +   E +L    + K     LE  +    D+ + + 
Sbjct: 746 AEDERVGRIQESDQQVVELMRKLKKERAERHLIEQEFKKYEREQLESVRAMKLDQATSMQ 805


>gi|297462058|ref|XP_887804.4| PREDICTED: myosin, heavy chain 14 isoform 4 [Bos taurus]
 gi|297485855|ref|XP_002695172.1| PREDICTED: myosin, heavy polypeptide 14-like [Bos taurus]
 gi|296477596|gb|DAA19711.1| myosin, heavy polypeptide 14-like [Bos taurus]
          Length = 2006

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 68/208 (32%), Gaps = 5/208 (2%)

Query: 85   LTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLL--DFL 142
            L     E    +  ++   + L+      +  +  L    +  E A +  + + +  +  
Sbjct: 945  LELVVSELEARVGEEEECSRQLQTEKKRLQQHIQELETHLEAEEGARQKLQLEKVTTEAK 1004

Query: 143  GKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMM 202
             K       +     + + +  K+   R+        + E K   L  L   ++  +  M
Sbjct: 1005 LKKLGEDLLLLEDQNAKLSKERKLLEERLSEFSSQAAEEEEKVKSLNKLRLKYEATIADM 1064

Query: 203  KNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEI 262
            ++   K   S+ +L + +R +     EL+E + EQ+     +         E    L   
Sbjct: 1065 EDRLRKEEKSRQELEKLKRRLDVEGSELQEQMAEQQQRAEELRAQLGRKEEELQAALARA 1124

Query: 263  SRD---LEQNQRTFADEMSKLTILEKTR 287
              +     Q  ++  +  + L   ++  
Sbjct: 1125 EEEGGVRAQLLKSLREAQAGLAEAQEDL 1152



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 25/222 (11%), Positives = 72/222 (32%), Gaps = 18/222 (8%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
            +     D    ++      R  ++ E   L+ L  +     +  E   +QL     +   
Sbjct: 1625 DAEVERDEERKQRALAVAARKKLEAE---LEELKAQTTAAGQGKEEAVKQLRKMQAQMKE 1681

Query: 148  TCSKVFNYG--ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL 205
               +V         ++   +    R++ +    L L+ + +         Q++   M + 
Sbjct: 1682 LWREVEETRSSREEIFAQNRESEKRLKGLEAEVLRLQEELAASDRARRQAQQERDEMADE 1741

Query: 206  FEKNAVSQNDLNQQERIVY-------------KSTLELRENIHEQKNMLRHINELYDEAN 252
                ++S+  +  ++R +              +S  EL  + + +  +          A 
Sbjct: 1742 VANGSLSKAAILDEKRQLEGRLGQMEEELEEEQSNAELLNDRYRKLLLQVESLTTELSAE 1801

Query: 253  LEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
              F+   +   + LE+  +   + + +     + R++  I +
Sbjct: 1802 RSFSAKAESGRQQLERQVQELRERLGEEDAGARARQKMIIAA 1843



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 72/210 (34%), Gaps = 15/210 (7%)

Query: 88   EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQL------LDF 141
            +           +   ++L   ++  +  L+   +  +  ++    RE+++      L+ 
Sbjct: 1151 DLEAERAARAKAEKQRRDLGEELEALRGELEDTLDSTNAQQELRSKREQEVTELKKALEE 1210

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSI----YLNRLDLENKSSLLRALLSSHQ- 196
              + H    +            L  +L + R         RL LE + S LR  LS+ Q 
Sbjct: 1211 ETRIHEVAVQELRQRHGQALGELAEQLEQARRSKGTWEKTRLTLEAEVSELRTELSNLQT 1270

Query: 197  ---KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               +     + L  +    Q  +   ER   ++  +L+    E +N+   ++E   +A +
Sbjct: 1271 ARQEGEQRRRRLESQLQEVQGRVGDGERARAEAAEKLQRAQAELENVSGALSEAESKA-I 1329

Query: 254  EFANYLKEISRDLEQNQRTFADEMSKLTIL 283
              +  L  +   L   Q    +E      L
Sbjct: 1330 RLSKELTSMEAQLHDAQELLQEETRAKLAL 1359



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 59/200 (29%), Gaps = 1/200 (0%)

Query: 92   TTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
                + L+KV+ +     +  +   L+  N K     K  E R  +      +       
Sbjct: 990  ARQKLQLEKVTTEAKLKKLGEDLLLLEDQNAKLSKERKLLEERLSEFSSQAAEEEEKVKS 1049

Query: 152  VFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
            +    +     ++     R+R    +R +LE     L    S  Q+ +   +   E+   
Sbjct: 1050 LNKLRLK-YEATIADMEDRLRKEEKSRQELEKLKRRLDVEGSELQEQMAEQQQRAEELRA 1108

Query: 212  SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
                  ++ +       E      +    LR       EA  +        ++  +Q + 
Sbjct: 1109 QLGRKEEELQAALARAEEEGGVRAQLLKSLREAQAGLAEAQEDLEAERAARAKAEKQRRD 1168

Query: 272  TFADEMSKLTILEKTREQKT 291
               +  +    LE T +   
Sbjct: 1169 LGEELEALRGELEDTLDSTN 1188


>gi|229489735|ref|ZP_04383592.1| band 7 protein [Rhodococcus erythropolis SK121]
 gi|229323245|gb|EEN89009.1| band 7 protein [Rhodococcus erythropolis SK121]
          Length = 523

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 63/204 (30%), Gaps = 5/204 (2%)

Query: 89  DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLN--NKYDVLEKAFESREEQLLDFLGKYH 146
           D         + V +  LR   + E +  D      +    +    +RE+     +    
Sbjct: 228 DTAIASANQKRDVELARLRAQTEAENAEADQAGPLAQATAEKAVGIAREQAEAARVEART 287

Query: 147 STCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
               +      +++   +       R   + R + E ++++LRA   +            
Sbjct: 288 EVERRRAQQSEAALQADVIAPAEAERQASIARAEGERQAAILRAQAQAESARQAGGAQAD 347

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHIN-ELYDEANLEFANYLKEIS-- 263
            +  V+    ++Q+         L      +K     +  E   EA+   A    E +  
Sbjct: 348 ARKLVADAVRSEQQADADGLRARLEAEADGRKVAADAVRAEQQAEADGLRAKLEAEAAGK 407

Query: 264 RDLEQNQRTFADEMSKLTILEKTR 287
           R + +   ++  + ++L  L    
Sbjct: 408 RQIAEALNSYTPQAAQLLTLPDVL 431


>gi|227822618|ref|YP_002826590.1| HlyD family secretion protein [Sinorhizobium fredii NGR234]
 gi|227341619|gb|ACP25837.1| HlyD family secretion protein [Sinorhizobium fredii NGR234]
          Length = 397

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 75/242 (30%), Gaps = 21/242 (8%)

Query: 173 SIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRE 232
           +I  NRL+       +R++  +      + + L +       D  ++ +++ +   + + 
Sbjct: 84  AIVNNRLNAIGNGEAIRSVTVTPASTGNLTEILVKSG-----DRIEEGQVIARLDSDEQM 138

Query: 233 NIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTI 292
              E   + R       E            + ++   +         L   E    ++ I
Sbjct: 139 IAAEHARLTRDSAREKVERYRNLGTARAVTAVEVRDAEIAMQTAELALRTAELDLRRRDI 198

Query: 293 LSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTPKQIQHVKKGYTATVRF 352
           ++P  G IV   + +  +Y   S P+  +V       +   V  +    +  G   T   
Sbjct: 199 VAPSKG-IVGIITVNVGDYVTTSTPIA-VVDDRSQILVDFWVPERFASKISVGQPVTANA 256

Query: 353 PHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDLAFSDNNIELRNGFPAE 412
                   ++    I  ID  + Q    L+        ++  D         LR G    
Sbjct: 257 VA---QPGRQLDGAIHAIDNRLDQASRTLRV----RARIENPDDM-------LRAGMSFS 302

Query: 413 VL 414
           V+
Sbjct: 303 VM 304



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/108 (11%), Positives = 37/108 (34%), Gaps = 3/108 (2%)

Query: 44  VSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSI 103
              +GE +     V +    +G + +  V++G +I +G  +   +  E     +  +++ 
Sbjct: 92  AIGNGEAI---RSVTVTPASTGNLTEILVKSGDRIEEGQVIARLDSDEQMIAAEHARLTR 148

Query: 104 KNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSK 151
            + R  ++  ++           +  A  + +   L           +
Sbjct: 149 DSAREKVERYRNLGTARAVTAVEVRDAEIAMQTAELALRTAELDLRRR 196


>gi|329112534|ref|NP_001192270.1| liprin-alpha-2 isoform 1 [Mus musculus]
 gi|190148193|gb|ACE63188.1| liprin-alpha 2 [Mus musculus]
          Length = 1257

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 24/226 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L +  K   + +R  +      +  L  +     +   +  EQ +    K  S+    
Sbjct: 178 KSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMVSSEGST 237

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF------ 206
            +  +  +    K+   R+ +  ++  D  ++   L+ LL     ++  MK         
Sbjct: 238 ESEHLEGMEAGQKVHEKRLSNGSIDSTDDTSQIVELQELLEKQNYEMAQMKERLTALSSR 297

Query: 207 -----EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL-------------Y 248
                ++   ++ DL + E +  K   ++RE + ++++M   I  L              
Sbjct: 298 VGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSI 357

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + N +  N L      L Q +        +L + E+  +Q    +
Sbjct: 358 HDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKA 403



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 80/219 (36%), Gaps = 19/219 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E  +L++ +   +  ++  +    S +  +  + +   K     EE    +        
Sbjct: 271 VELQELLEKQNYEMAQMKERLTALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAM 330

Query: 150 SKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++       I+++ +          SI+     LEN+ +   A+L   ++     + L E
Sbjct: 331 AQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEK---NRQLQE 387

Query: 208 KNAVSQNDLNQQER---IVYKSTLELRENIHE----------QKNMLRHINELYDEANLE 254
           +  +++  L Q  R    + +   EL + I             +  +RH+    +E N E
Sbjct: 388 RLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEEKNQE 447

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                ++  +  E++ +  +D + +L      R Q  + 
Sbjct: 448 L-QRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLK 485


>gi|187939940|gb|ACD39076.1| hypothetical protein PACL_0288 [Pseudomonas aeruginosa]
          Length = 821

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 76/213 (35%), Gaps = 10/213 (4%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           ++T   ++L++ + +    + +  + AL  L  +   L +  E+  +QL D   +     
Sbjct: 163 LDTERSLNLREANAEA--GYAEQNEHALRQLEKRQRQLTQQHEAHLQQLQDEKRQLDGEL 220

Query: 150 SKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNL---F 206
           S+V        +   + +  R R +     +++ +   L    S   ++   +K      
Sbjct: 221 SQVARRLAEVKFNCTEAEAERTRQLDQREHEIQQRKIELDRARSRLDREWAEIKAAESDL 280

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIH-----EQKNMLRHINELYDEANLEFANYLKE 261
           E+   ++ +  +       S +E + +         K  L  I EL      + A  + E
Sbjct: 281 EQRIATEMEAERASHAQSISRMERQRDNAWSKAEGLKEQLADIQELKQVLGEQSAAEILE 340

Query: 262 ISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
               L Q  R     + +    E  RE + + S
Sbjct: 341 QLESLRQENRALKRSLEQSDTAELQRENEYLRS 373



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 59/185 (31%), Gaps = 15/185 (8%)

Query: 114 KSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRS 173
           +S  +      D     +  +   +   L ++       +     +  +       R ++
Sbjct: 67  RSVCERFRGDGDTDLARWIEQFANVCKELVRFKEHLHDEYAERWEAANQLALTAEVREQA 126

Query: 174 IYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELREN 233
           +   +  LE  S+ L    +    +  ++       A  +++L   ER +          
Sbjct: 127 LATQQQALEEASAALENEKAELASEQALL-------AGKKSELLDTERSLNLREANAEAG 179

Query: 234 IHEQ--------KNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEK 285
             EQ        +   R + + ++    +  +  +++  +L Q  R  A+     T  E 
Sbjct: 180 YAEQNEHALRQLEKRQRQLTQQHEAHLQQLQDEKRQLDGELSQVARRLAEVKFNCTEAEA 239

Query: 286 TREQK 290
            R ++
Sbjct: 240 ERTRQ 244


>gi|148975060|ref|ZP_01812040.1| hypothetical protein VSWAT3_26084 [Vibrionales bacterium SWAT-3]
 gi|145965569|gb|EDK30818.1| hypothetical protein VSWAT3_26084 [Vibrionales bacterium SWAT-3]
          Length = 378

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 71/193 (36%), Gaps = 16/193 (8%)

Query: 40  IEISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLK 99
           IE    + G I+   + V IKS   GI+ +  V  G ++ QG  L+      T   +   
Sbjct: 42  IEKQAVAVGNIVPA-HSVSIKSQIDGIVGEMYVLVGEKVKQGQALIKVRPNPTPQALTDA 100

Query: 100 KVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS- 158
              +  +R   D E +     N +  V +       ++ +       S  + V     + 
Sbjct: 101 STDL--MRSEADLESAKQKLTNLESLVKQDIIPKNYDEYVSARSTVKSAQANVLQKRQNL 158

Query: 159 SVYRSLKMKLTRMR-----------SIYLNRLDL-ENKSSLLRALLSSHQKDLTMMKNLF 206
            + RS +  +   R           ++   ++++ E   S   +  ++    L  M +L 
Sbjct: 159 ELIRSGEASIGDARLTSTIYAPIDGTVLNRKVEVGEPIISTESSQAATEMMSLADMNSLI 218

Query: 207 EKNAVSQNDLNQQ 219
            K +VS++D  Q 
Sbjct: 219 FKGSVSEHDAAQL 231



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 21/219 (9%)

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           +  DL + E  +  +  +L       K  +  I + YDE  +   + +K    ++ Q ++
Sbjct: 100 ASTDLMRSEADLESAKQKLTNLESLVKQDI--IPKNYDEY-VSARSTVKSAQANVLQKRQ 156

Query: 272 TFADEMSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYA------QQSQPLMKIVPHS 325
                 S    +   R   TI +PI GT++  +              Q +  +M +    
Sbjct: 157 NLELIRSGEASIGDARLTSTIYAPIDGTVLNRKV-EVGEPIISTESSQAATEMMSLA-DM 214

Query: 326 KLTYIRAKVTPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQE 385
                +  V+      +  G    +    Y D+   +   ++ K+  I S+  N+ +   
Sbjct: 215 NSLIFKGSVSEHDAAQLSPGMPVLLTVAPYPDM---EISGVLTKV-AIQSENLNSPEGNA 270

Query: 386 YYE-----VILKITDLAFSDNNIELRNGFPAEVLFTAKN 419
             +       +++ +L      I LR+GF +    T K 
Sbjct: 271 TAKSFDNGFEVEVGELKI-PKEILLRSGFSSTAQITLKK 308


>gi|120603542|ref|YP_967942.1| RND family efflux transporter MFP subunit [Desulfovibrio vulgaris
           DP4]
 gi|120563771|gb|ABM29515.1| efflux transporter, RND family, MFP subunit [Desulfovibrio vulgaris
           DP4]
          Length = 416

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 4/91 (4%)

Query: 46  SSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKKVSIKN 105
           + G +     V  ++S  +G +       G  + +G  L T +       +   +   + 
Sbjct: 56  AVGNVEASATVQ-VRSRITGELTGIHFREGDDVRKGQKLFTIDPRPMEAALREARARQER 114

Query: 106 LRCHIDTEKSALDFLNNKYDVLEKAFESREE 136
            R  +     A D L     ++E  F SRE+
Sbjct: 115 TRAQLT---KAEDDLRRFASLVEGGFVSREQ 142


>gi|68533073|dbj|BAE06091.1| PPFIA2 variant protein [Homo sapiens]
          Length = 1258

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 24/226 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L +  K   + +R  +      +  L  +     +   +  EQ +    K  S+    
Sbjct: 189 KSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGST 248

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF------ 206
            +  +  +    K+   R+ +  ++  D  ++   L+ LL     ++  MK         
Sbjct: 249 ESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQNYEMAQMKERLAALSSR 308

Query: 207 -----EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL-------------Y 248
                ++   ++ DL + E +  K   ++RE + ++++M   I  L              
Sbjct: 309 VGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSI 368

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + N +  N L      L Q +        +L + E+  +Q    +
Sbjct: 369 HDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKA 414



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 80/219 (36%), Gaps = 19/219 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E  +L++ +   +  ++  +    S +  +  + +   K     EE    +        
Sbjct: 282 VELQELLEKQNYEMAQMKERLAALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAM 341

Query: 150 SKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++       I+++ +          SI+     LEN+ +   A+L   ++     + L E
Sbjct: 342 AQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEK---NRQLQE 398

Query: 208 KNAVSQNDLNQQER---IVYKSTLELRENIHE----------QKNMLRHINELYDEANLE 254
           +  +++  L Q  R    + +   EL + I             +  +RH+    +E N E
Sbjct: 399 RLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEEKNQE 458

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                ++  +  E++ +  +D + +L      R Q  + 
Sbjct: 459 L-QRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLK 496


>gi|325267435|ref|ZP_08134091.1| hypothetical protein HMPREF9098_1819 [Kingella denitrificans ATCC
           33394]
 gi|324981076|gb|EGC16732.1| hypothetical protein HMPREF9098_1819 [Kingella denitrificans ATCC
           33394]
          Length = 904

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 81/235 (34%), Gaps = 13/235 (5%)

Query: 68  KKFQVENGSQILQGTPLLTFED--IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYD 125
               V   S + +   L   ED   +    I  K+ ++KN +  I  +++ L+    + +
Sbjct: 23  NSMNVTEASLLNKQQELKELEDSLSQKETYIAQKEQALKNAKDAIAKKEAELNDKRIQLE 82

Query: 126 VLEKAFESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKS 185
            +E   ++   +L            K      +  ++ ++ K   +R   L     E + 
Sbjct: 83  EMELQAKNGFPELFKEKFSEVIEQLKEREENATERWKHIQSKSEELRQRELEMQKAEIQR 142

Query: 186 SL-LRALLSSHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLR-- 242
                   +    +L  ++   EK   S+  +N    I  + + E    I   +  +   
Sbjct: 143 DTGYADDRAKLDDELFNLRKKQEKELESK-RVNALTAIEKELSEERASRIASLEKEIADR 201

Query: 243 ------HINELYDEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
                  I +  D+   E   +LKE   +L++ +     +  +L   +   E++ 
Sbjct: 202 LKVHEVAIQQEKDKLKQERNAFLKE-QAELDELKDELEYQKQRLQSSKDRLEERE 255


>gi|322392455|ref|ZP_08065915.1| competence factor transporter ComB [Streptococcus peroris ATCC
           700780]
 gi|321144447|gb|EFX39848.1| competence factor transporter ComB [Streptococcus peroris ATCC
           700780]
          Length = 297

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 94/271 (34%), Gaps = 24/271 (8%)

Query: 159 SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
           SV+   ++ L+   ++  +R+    +S+  + ++++H +         E   V + +L  
Sbjct: 38  SVFAEKEISLSSKATVEPSRIISNIQSASNQRMVANHME---------ENKRVQRGELLV 88

Query: 219 QERIVYKSTLELRENIHEQKNMLRH-INELYDEANLEFANYLKEISRDLEQNQRTFADEM 277
           Q + +     E++  ++  +  +                     I+    Q Q     ++
Sbjct: 89  QYQKIGD---EIQSEVYNSRFEMPQDYKSKASGLKNSEVQQKISITSQKPQKQEILEGKL 145

Query: 278 SKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVP---HSKLTYIRAKV 334
            K +      E+  I +   G +  N     S+   +  PL K+ P       T + A +
Sbjct: 146 GKNSQSRF-LEEGVIRAEEDGILHLNPEIGQSSVVAEGTPLAKLYPPLDREGKTKLTAYL 204

Query: 335 TPKQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKIT 394
           + K I  ++ G    VRF    D   +    ++ KI  I +      Q   ++++  + +
Sbjct: 205 SSKDIMGIQIGDP--VRFTTSNDNNNQVL--LVSKITGIDTIATRTDQGN-FFKIEAETS 259

Query: 395 DLAFSDNNIELRNGFPAEVLFTAKNTTLAQE 425
                  N+    G    +       +  + 
Sbjct: 260 VTEEEAKNLRY--GLEGRLRIMIGKKSYFRY 288


>gi|320104867|ref|YP_004180458.1| RND family efflux transporter MFP subunit [Isosphaera pallida ATCC
           43644]
 gi|319752149|gb|ADV63909.1| efflux transporter, RND family, MFP subunit [Isosphaera pallida
           ATCC 43644]
          Length = 453

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 53/141 (37%), Gaps = 4/141 (2%)

Query: 41  EISVSSSGEILNEDNVVEIKSPFSGIIKKFQVENGSQILQGTPLLTFEDIETTDLIDLKK 100
           + +V  +G I   + V  I++  SG +++   E G  +  G PL   +     + +   K
Sbjct: 64  DAAVFDNGTIEAIERVR-IRARVSGYLQEVFFEEGQLVKTGDPLFLIDPRPYENAVAQAK 122

Query: 101 VSIKNLRCHI---DTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGI 157
             +   +  I   D +      L  K  + ++ ++    Q  +      S  +++    +
Sbjct: 123 GDLARAQAAIKKYDADLVRAQQLIAKRAMSKEEYDQTVAQRNEAAAAVESLQAQLAQAEL 182

Query: 158 SSVYRSLKMKLTRMRSIYLNR 178
           +  +  +   +T +    L R
Sbjct: 183 NLEFTRIHSPITGIAGRVLIR 203


>gi|307823112|ref|ZP_07653342.1| efflux transporter, RND family, MFP subunit [Methylobacter
           tundripaludum SV96]
 gi|307735887|gb|EFO06734.1| efflux transporter, RND family, MFP subunit [Methylobacter
           tundripaludum SV96]
          Length = 404

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 16/206 (7%)

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
            +QE     +     +   E          L  + +        E    + Q +   A  
Sbjct: 124 LEQELAQAHAAAAQIKVRLELARSTLKRWTLLKDTDSVVQQEFDEKRSAVLQAEADLAAA 183

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
              +  LEK  + + I++P +G I   +S    +        +  +       +   V  
Sbjct: 184 QVNVKRLEKVEDYRRIVAPFSGVITR-RSVDVGSLINAGSQELFALTQIDPLRLTVWVPQ 242

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
                VK G    VR P   D + K   A +E +   +   + + Q            D+
Sbjct: 243 AYADDVKIGQDVAVR-PA--DAQGKSVSARVEHVAGALDPVNRSRQV-----------DI 288

Query: 397 AFSDNNIELRNGFPAEVLF-TAKNTT 421
           +  + + +L  G   E+      + T
Sbjct: 289 SLPNKDGKLLPGSYVEISINVVGSKT 314


>gi|296476686|gb|DAA18801.1| myosin, heavy chain 3, skeletal muscle, embryonic [Bos taurus]
          Length = 1929

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 82/229 (35%), Gaps = 13/229 (5%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKY 145
              ++++       K+ S    +  +D   S ++ ++     LEK   + E+QL +  GK 
Sbjct: 1207 QIDNLQRVKQKLEKEKS--EFKLELDDLGSNVESVSKSKANLEKICRTLEDQLSEARGKN 1264

Query: 146  HSTCSKV---------FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQ 196
                  +                + R L+ K + +  +  ++     +   L+  L    
Sbjct: 1265 EEIQRSLSELSTQKSRLQTEAGELSRQLEEKESTVSQLSRSKQAFTQQIEELKRQLEEES 1324

Query: 197  KDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFA 256
            K  + + +  +      + L +Q     ++  EL+  + +  + +      Y+   ++  
Sbjct: 1325 KAKSALAHALQSARHDCDLLREQYEEEQEAKAELQRALSKANSEVAQWRTKYETDAIQRT 1384

Query: 257  NYLKEISRDLEQNQRTFADEMSKLTI--LEKTREQKTILSPIAGTIVYN 303
              L+E  + L Q  +   +++  +        + ++ + + +   +V  
Sbjct: 1385 EELEEAKKKLAQRLQDSEEQVEAVNAKCASLEKTKQRLQAEVEDLMVDV 1433



 Score = 46.5 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 81/216 (37%), Gaps = 10/216 (4%)

Query: 82   TPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDF 141
               L  +D         ++++I   R ++   ++ ++ L    +  E++ +  E++LLD 
Sbjct: 1653 DTQLHLDDALRGQEDLKEQLAIVERRANL--LQAEVEELRATLEQTERSRKIAEQELLDA 1710

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTM 201
                 S   ++ +   +S+  + K   T +  +     D    +            D  M
Sbjct: 1711 -----SERVQLLHTQNTSLIHTKKKLETDLAQLQSEVEDASRDARNAEEKAKKAITDAAM 1765

Query: 202  MKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKE 261
            M    +K   +   L + ++ + ++  +L+  + E + +         +   +    ++E
Sbjct: 1766 MAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALK---GGKKQIQKLETRIRE 1822

Query: 262  ISRDLEQNQRTFADEMSKLTILEKTREQKTILSPIA 297
            +  +LE  Q+   + +  L   E+  ++ T  S   
Sbjct: 1823 LESELEGEQKKNTESVKGLRKYERRVKELTYQSEED 1858



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 71/223 (31%), Gaps = 15/223 (6%)

Query: 74   NGSQILQGTPLLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFES 133
             G   L    +L  E+ +      LKK   +  +     E      L  +  + E     
Sbjct: 1057 EGDLKLAQESILDLENDKQQLDERLKKKDFEYCQLQSKVEDEQTLGLQFQKKIKELQARI 1116

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             E +      +     ++      +     L  +L     +   +++L  K         
Sbjct: 1117 EELEEEIEAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELNKKREA------ 1170

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL 253
               + L + ++L E     +  +    +    S  EL E I   + + + + +   E  L
Sbjct: 1171 ---EFLKLRRDLEEATLQHEAMVAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSEFKL 1227

Query: 254  EFANYLKEIS------RDLEQNQRTFADEMSKLTILEKTREQK 290
            E  +    +        +LE+  RT  D++S+     +  ++ 
Sbjct: 1228 ELDDLGSNVESVSKSKANLEKICRTLEDQLSEARGKNEEIQRS 1270



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 67/201 (33%), Gaps = 13/201 (6%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLG 143
            L   +        D +    K  +   D    A +    K        E  ++ L   + 
Sbjct: 1735 LAQLQSEVEDASRDARNAEEKAKKAITDAAMMAEEL--KKEQDTSAHLERMKKNLEQTVK 1792

Query: 144  KYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMK 203
                   +     +    + ++   TR+R +     +LE +       +   +K    +K
Sbjct: 1793 DLQHRLDEAEQLALKGGKKQIQKLETRIRELES---ELEGEQKKNTESVKGLRKYERRVK 1849

Query: 204  NLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEIS 263
             L  ++   + ++ + + +V K  +++       K+  R   E  ++AN     + K   
Sbjct: 1850 ELTYQSEEDRKNVLRLQDLVDKLQMKV-------KSYKRQAEEADEQANAHLTKFRK-AQ 1901

Query: 264  RDLEQNQRTFADEMSKLTILE 284
             +LE+ +       S++  L 
Sbjct: 1902 HELEEAEERADIAESQVNKLR 1922


>gi|326674641|ref|XP_003200176.1| PREDICTED: plectin-like [Danio rerio]
          Length = 4530

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 77/196 (39%), Gaps = 10/196 (5%)

Query: 99   KKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYGIS 158
            ++ + + LR  +  E+ A      + D  ++  E+  E       K  +   +       
Sbjct: 1663 RQKANEALRLRLQAEEEAHKKTLAQEDAEKQKDEAERE------AKKRAKAEESALKQKD 1716

Query: 159  SVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDLNQ 218
               + L+ +     S    +L  E++   LRA     ++  ++   L ++    +++++ 
Sbjct: 1717 MAEQELERQRKLAESTAQQKLSAEHELIRLRADFDHAEQQRSL---LEDELYRLKSEVSA 1773

Query: 219  QERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADEMS 278
             E+   +   EL +   E + +L  +    ++ ++      K++        R  ADE +
Sbjct: 1774 AEQQRKQLEDELSKVRSEMEVLL-QLKSKAEKDSMSTTEKSKQLLEAEAGKLRDLADEAA 1832

Query: 279  KLTILEKTREQKTILS 294
            KL  + +  +++  ++
Sbjct: 1833 KLRAIAEEAKRQRQVA 1848



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 65/201 (32%), Gaps = 27/201 (13%)

Query: 89   DIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHST 148
                 +  +  K   +  R   D E      L  +     +A   +++Q+ D     H  
Sbjct: 2138 QTAEVEATNQAKAQEEAERLRKDAE------LEAEKRAQAEAAALKQKQIADEEMARHKK 2191

Query: 149  CSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEK 208
             ++      S V + L     R+      +  L+ +   L+  +                
Sbjct: 2192 HAEQTLKQKSQVEQELAKVKLRLDETDKQKSVLDEELHRLKDEV---------------- 2235

Query: 209  NAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQ 268
                  D  +Q+  V +   ++R  + E   +   I +       +  +  ++   +  +
Sbjct: 2236 -----GDAVKQKAQVEEELFKVRIQMEELIKLKLRIEQENQRLIQKDKDNTQKFLAEEAE 2290

Query: 269  NQRTFADEMSKLTILEKTREQ 289
            N +  A+E ++L+I  +   +
Sbjct: 2291 NMKKLAEEAARLSIEAQETAR 2311



 Score = 43.1 bits (100), Expect = 0.100,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 64/178 (35%), Gaps = 12/178 (6%)

Query: 86   TFEDIETTDLIDLKKVSIKNLRCHI------------DTEKSALDFLNNKYDVLEKAFES 133
                    D +      ++N +  +            +   +  + +  +  +L++ F S
Sbjct: 2457 RLSSTREADDLRKAIADLENEKAKLKKDAEDLQKKSKEMVNAQQEQIKQEKTILQQTFMS 2516

Query: 134  REEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLS 193
             +E LL    +      ++ +     V +S  +K  + R       +     + + A L 
Sbjct: 2517 EKEMLLKKEKQIEDEKKRLESQFEEEVRKSKALKDEQERQRKQMEDEKIKLKASMDAALI 2576

Query: 194  SHQKDLTMMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEA 251
              ++    M N  ++    +    +QER++ +   +LRE + + +   +   E++ + 
Sbjct: 2577 KQKEAEKEMFNKQKEMQELERKKLEQERMLAEENQQLREKLQQLEVAQKITQEIHIQT 2634



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 68/212 (32%), Gaps = 4/212 (1%)

Query: 84   LLTFEDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAF--ESREEQLLDF 141
            ++  +   T       +  +  LR      +        + + L K    E++++++ + 
Sbjct: 1484 IIRLQLETTMKQKSTAQEELMQLRSKAAEAERLRKAAQEEAEKLRKQVNEETQKKRIAEE 1543

Query: 142  LGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLE-NKSSLLRALLSSHQKDLT 200
              K  S   K            L      +     +    E  K   ++    + QK  +
Sbjct: 1544 ELKLKSEAEKEAARQKQKALDDLDKLKMEVDEAERHMKQAEIEKERQIKLAQDAAQKSAS 1603

Query: 201  MMKNLFEKNAVSQ-NDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYL 259
                    + V + + L +  R  + + ++L+E     K      ++  ++A  E   + 
Sbjct: 1604 AELQSKRMSFVEKTSKLEESLREKHGTVIQLQEEAERLKKQQEEADKAREDAEKELEKWR 1663

Query: 260  KEISRDLEQNQRTFADEMSKLTILEKTREQKT 291
            ++ +  L    +   +   K    E   +QK 
Sbjct: 1664 QKANEALRLRLQAEEEAHKKTLAQEDAEKQKD 1695



 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 61/176 (34%), Gaps = 16/176 (9%)

Query: 131  FESREEQLLDFLGKYHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRA 190
              +R  +L+    +Y    +            + K+K    + +   + +L+ +  L  A
Sbjct: 1347 LRTRYSELMTLTSQYIKFITDTQRRLEDEEKAAEKLKAEERKKMAEMQAELDKQKQLAEA 1406

Query: 191  ---LLSSHQKDLTMMKNLFEKNAVSQNDLN--QQERIVYKSTLELRENIHEQKNMLRHIN 245
                ++  +K+   +K + ++  VS+ +      ER      LEL E  +  +  ++  +
Sbjct: 1407 HAKAIAKAEKEAQELKLMMQEE-VSKREFVAVDAERQKQNIQLELHELKNLSEQQIKSKS 1465

Query: 246  ELYDEANLEFANYLKEIS----------RDLEQNQRTFADEMSKLTILEKTREQKT 291
            +  +EA        +EI           +     Q       SK    E+ R+   
Sbjct: 1466 QQVEEALQSRVKIEEEIRIIRLQLETTMKQKSTAQEELMQLRSKAAEAERLRKAAQ 1521


>gi|195114078|ref|XP_002001594.1| GI16038 [Drosophila mojavensis]
 gi|193912169|gb|EDW11036.1| GI16038 [Drosophila mojavensis]
          Length = 1081

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 69/206 (33%), Gaps = 6/206 (2%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQ---LLDFLGK 144
           + +  +   +      +     +   K+AL+    +   + KA  +   +    L+ L +
Sbjct: 732 DQLRASGDSNAVIQKQQKENAQLMEAKAALEQQLQQESEIAKANRAEAAEKDLQLNELKQ 791

Query: 145 YHSTCSKVFNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKN 204
                +K++   + S  +  + +            DLE   +  ++ L   Q+ L     
Sbjct: 792 QLEDQAKLYAQLVESQEQLKRERAEEQSQASERTADLEAALNAKQSELEQLQQQLLEQTQ 851

Query: 205 LFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISR 264
           L  +   SQ  L   ++       +      + +  L+      ++  LE     ++ ++
Sbjct: 852 LHAQLVESQGQL---QQKHAAELGQTSARAADLEATLKATQTQLEQLQLEATRSGEQGAQ 908

Query: 265 DLEQNQRTFADEMSKLTILEKTREQK 290
            L Q Q   A   +K +  +     +
Sbjct: 909 QLVQLQTELAQLQAKESAAQAALNAR 934



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 19/211 (9%)

Query: 91  ETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCS 150
           E      + K  I++L   I    SA   L +   V E    +  + L+  L +  S   
Sbjct: 475 EMNAQSQVYKEKIQDLEKKITKLVSATPSLQSIPPVEESVALANAQSLIAELQEKLSQQE 534

Query: 151 KVFNYGISSVYRSLKMKLTR----MRSIYLNRLDLENKSSLLRA------LLSSHQKDLT 200
           K+     S      +  L       R     + +L  K   L         + + +++L 
Sbjct: 535 KLNEARHSESLEEQQRLLENINYLQRQNETLQTELMAKDESLEKFSLSECGIENLRRELA 594

Query: 201 MMKNLFEKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLK 260
           ++K   EK A    ++ +Q+        E  E + +    L  I    D    E A+   
Sbjct: 595 LLKEENEKQAQQAKEMFEQQ------LAEKAEQVRQLSKELHEIKSSSDTLESERAHVTD 648

Query: 261 E---ISRDLEQNQRTFADEMSKLTILEKTRE 288
           E   +  ++        +   +L  +     
Sbjct: 649 ECEILQTEIRMRDEQIKELSQQLDEISTQLN 679


>gi|168270852|dbj|BAG10219.1| liprin-alpha-2 [synthetic construct]
          Length = 1247

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 24/226 (10%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
             L +  K   + +R  +      +  L  +     +   +  EQ +    K  S+    
Sbjct: 178 KSLFEHHKALDEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGST 237

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF------ 206
            +  +  +    K+   R+ +  ++  D  ++   L+ LL     ++  MK         
Sbjct: 238 ESEHLEGMEPGQKVHEKRLSNGSIDSTDETSQIVELQELLEKQNYEMAQMKERLAALSSR 297

Query: 207 -----EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINEL-------------Y 248
                ++   ++ DL + E +  K   ++RE + ++++M   I  L              
Sbjct: 298 VGEVEQEAETARKDLIKTEEMNTKYQRDIREAMAQKEDMEERITTLEKRYLSAQRESTSI 357

Query: 249 DEANLEFANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTILS 294
            + N +  N L      L Q +        +L + E+  +Q    +
Sbjct: 358 HDMNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKA 403



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 80/219 (36%), Gaps = 19/219 (8%)

Query: 90  IETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTC 149
           +E  +L++ +   +  ++  +    S +  +  + +   K     EE    +        
Sbjct: 271 VELQELLEKQNYEMAQMKERLAALSSRVGEVEQEAETARKDLIKTEEMNTKYQRDIREAM 330

Query: 150 SKVF--NYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFE 207
           ++       I+++ +          SI+     LEN+ +   A+L   ++     + L E
Sbjct: 331 AQKEDMEERITTLEKRYLSAQRESTSIHDMNDKLENELANKEAILRQMEEK---NRQLQE 387

Query: 208 KNAVSQNDLNQQER---IVYKSTLELRENIHE----------QKNMLRHINELYDEANLE 254
           +  +++  L Q  R    + +   EL + I             +  +RH+    +E N E
Sbjct: 388 RLELAEQKLQQTMRKAETLPEVEAELAQRIAALTKAEERHGNIEERMRHLEGQLEEKNQE 447

Query: 255 FANYLKEISRDLEQNQRTFADEMSKLTILEKTREQKTIL 293
                ++  +  E++ +  +D + +L      R Q  + 
Sbjct: 448 L-QRARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLK 485


>gi|118593192|ref|ZP_01550578.1| hypothetical protein SIAM614_08564 [Stappia aggregata IAM 12614]
 gi|118434277|gb|EAV40932.1| hypothetical protein SIAM614_08564 [Stappia aggregata IAM 12614]
          Length = 318

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 91/319 (28%), Gaps = 25/319 (7%)

Query: 97  DLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKVFNYG 156
           +   V++ NL        +  + +  +  V +  F  +   L                  
Sbjct: 24  EEGNVALGNLERDRVALTATANEVLVELPVPQGTFVKKGTVLAQLDPAEQQAIVAQAKAE 83

Query: 157 ISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVSQNDL 216
           +     +L       R   + +       +  +A L   Q       +L  +   SQ  L
Sbjct: 84  VQKAKANLVKLENGARQEEIAKA--RASVAGAKAELEDAQATFERYNDLTGRGTTSQAQL 141

Query: 217 NQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRTFADE 276
           +  +     +   L+    + K ++                       DL+  +      
Sbjct: 142 DSAKAARDAADATLQSAQEQLKELVAGTR-----------------PEDLDIAKAELEAA 184

Query: 277 MSKLTILEKTREQKTILSPIAGTIVYNQSFSSSNYAQQSQPLMKIVPHSKLTYIRAKVTP 336
            + L   EK     TI +   GT+                P++ ++      Y R  V  
Sbjct: 185 QASLATQEKILSDLTITASRDGTLDSLPWN-LGERVTAGSPVVVML-AGDAPYARVYVPE 242

Query: 337 KQIQHVKKGYTATVRFPHYADIREKKFKAIIEKIDPIISQQDNNLQTQEYYEVILKITDL 396
                VK+G    VR         K  +  +  I    S        Q     ++ + ++
Sbjct: 243 PHRVKVKQGDKLEVRIDGLD----KSIEGTVRWISSEASFTPYYALNQSERARLMYVAEV 298

Query: 397 AFSDNNIELRNGFPAEVLF 415
              D+  +L NG PA+V+ 
Sbjct: 299 QLPDSANDLPNGVPAQVVL 317


>gi|157874112|ref|XP_001685550.1| membrane associated protein-like protein [Leishmania major]
 gi|68128622|emb|CAJ08754.1| membrane associated protein-like protein [Leishmania major strain
           Friedlin]
          Length = 887

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 62/206 (30%), Gaps = 5/206 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                 +       +  +  E      L  + +  E+A  +RE +    L +     +++
Sbjct: 460 EAEEQARLAREAEEQARLAREAEEQARLAREAE--EQARLAREAEEQARLAREAEEQARL 517

Query: 153 FN-YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +       +  R+      +  L  ++     L+   ++   + +   E+   
Sbjct: 518 AREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLVREAEEQARLAREAEEQ--A 575

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
                 +++  + +   E      E +   R   E  ++A L      +       + Q 
Sbjct: 576 RLVREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLVREAEEQARLAREAEEQA 635

Query: 272 TFADEMSKLTILEKTREQKTILSPIA 297
             A E  +   L +  E+    S ++
Sbjct: 636 RLAREAEEQARLAREVEESVARSKVS 661



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/201 (11%), Positives = 65/201 (32%), Gaps = 4/201 (1%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                 +       +  +  E      L  + +  E+A  +RE +    L +     +++
Sbjct: 440 EAEEQARLAREAEEQARLAREAEEQARLAREAE--EQARLAREAEEQARLAREAEEQARL 497

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                     + + +     +          + +  +A L+   ++   +    E+ A  
Sbjct: 498 AREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLAREAEEQA-R 556

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANL-EFANYLKEISRDLEQNQR 271
                +++  + +   E    + E +   R   E  ++A L   A     ++R+ E+  R
Sbjct: 557 LVREAEEQARLAREAEEQARLVREAEEQARLAREAEEQARLAREAEEQARLAREAEEQAR 616

Query: 272 TFADEMSKLTILEKTREQKTI 292
              +   +  +  +  EQ  +
Sbjct: 617 LVREAEEQARLAREAEEQARL 637



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/203 (10%), Positives = 64/203 (31%), Gaps = 5/203 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                 +       +  +  E      L  + +  E+A  +RE +    L +     +++
Sbjct: 470 EAEEQARLAREAEEQARLAREAEEQARLAREAE--EQARLAREAEEQARLAREAEEQARL 527

Query: 153 FN-YGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAV 211
                  +       +  R+      +  L  ++     L    ++   +++   E+  +
Sbjct: 528 AREAEEQARLAREAEEQARLAREAEEQARLVREAEEQARLAREAEEQARLVREAEEQARL 587

Query: 212 SQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQR 271
           ++    +++  + +   E      E +   R + E  ++A L      +       + Q 
Sbjct: 588 ARE--AEEQARLAREAEEQARLAREAEEQARLVREAEEQARLAREAEEQARLAREAEEQA 645

Query: 272 TFADEMSKLTILEKTREQKTILS 294
             A E+ +     K   +   +S
Sbjct: 646 RLAREVEESVARSKVSRESEEVS 668



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 63/202 (31%), Gaps = 6/202 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                 +       +  +  E      L  + +  E+A  +RE +    L +     +++
Sbjct: 410 EAEEQARLAREAEEQARLVREAEEQARLAREAE--EQARLAREAEEQARLAREAEEQARL 467

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                     + + +     +          + +  +A L+   ++   +    E+ A  
Sbjct: 468 AREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARL 527

Query: 213 QNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +  +Q R+    +    L     EQ  ++R   E    A    A     + R+ E+  
Sbjct: 528 AREAEEQARLAREAEEQARLAREAEEQARLVREAEEQARLARE--AEEQARLVREAEEQA 585

Query: 271 RTFADEMSKLTILEKTREQKTI 292
           R   +   +  +  +  EQ  +
Sbjct: 586 RLAREAEEQARLAREAEEQARL 607



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/208 (11%), Positives = 65/208 (31%), Gaps = 5/208 (2%)

Query: 88  EDIETTDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHS 147
                +     +       +  +  E      L  + +  E+A   RE +    L +   
Sbjct: 325 SQTPPSSQEQARLAREAEEQARLAREAEEQARLVREAE--EQARLVREAEEQARLAREAE 382

Query: 148 TCSKVFNYGISSVY-RSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLF 206
             +++        +      +  R+      +  L  ++     L+   ++   + +   
Sbjct: 383 EQARLVREAEEQAHLVREAEEQARLVREAEEQARLAREAEEQARLVREAEEQARLAREAE 442

Query: 207 EKNAVSQNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDL 266
           E+  +++    +++  + +   E      E +   R   E  ++A L      +      
Sbjct: 443 EQARLARE--AEEQARLAREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLARE 500

Query: 267 EQNQRTFADEMSKLTILEKTREQKTILS 294
            + Q   A E  +   L +  E++  L+
Sbjct: 501 AEEQARLAREAEEQARLAREAEEQARLA 528



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/201 (10%), Positives = 61/201 (30%), Gaps = 2/201 (0%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                 + V     +  +  E      L  + +  E+A   RE +    L +     +++
Sbjct: 360 EAEEQARLVREAEEQARLAREAEEQARLVREAE--EQAHLVREAEEQARLVREAEEQARL 417

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                       + +     +          + +  +A L+   ++   +    E+ A  
Sbjct: 418 AREAEEQARLVREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARL 477

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
             +  +Q R+  ++  + R     ++                 A     ++R+ E+  R 
Sbjct: 478 AREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARL 537

Query: 273 FADEMSKLTILEKTREQKTIL 293
             +   +  +  +  EQ  ++
Sbjct: 538 AREAEEQARLAREAEEQARLV 558



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/199 (11%), Positives = 58/199 (29%), Gaps = 4/199 (2%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                 +       +  +  E      L  + +  E+A   RE +    L +     +++
Sbjct: 370 EAEEQARLAREAEEQARLVREAEEQAHLVREAE--EQARLVREAEEQARLAREAEEQARL 427

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                     + + +     +          + +  +A L+   ++   +    E+ A  
Sbjct: 428 VREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARL 487

Query: 213 QNDLNQQERIV--YKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQ 270
             +  +Q R+    +    L     EQ  + R   E    A             + +   
Sbjct: 488 AREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARL 547

Query: 271 RTFADEMSKLTILEKTREQ 289
              A+E ++L    + + +
Sbjct: 548 AREAEEQARLVREAEEQAR 566



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/200 (10%), Positives = 51/200 (25%), Gaps = 2/200 (1%)

Query: 93  TDLIDLKKVSIKNLRCHIDTEKSALDFLNNKYDVLEKAFESREEQLLDFLGKYHSTCSKV 152
                 + V     +  +  E      L  + +   +     EEQ               
Sbjct: 350 EAEEQARLVREAEEQARLVREAEEQARLAREAEEQARLVREAEEQAHLVREAEEQARLVR 409

Query: 153 FNYGISSVYRSLKMKLTRMRSIYLNRLDLENKSSLLRALLSSHQKDLTMMKNLFEKNAVS 212
                + + R  + +   +R                R    + ++     +   +     
Sbjct: 410 EAEEQARLAREAEEQARLVREAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLAR 469

Query: 213 QNDLNQQERIVYKSTLELRENIHEQKNMLRHINELYDEANLEFANYLKEISRDLEQNQRT 272
           + +   +     +    L     EQ  + R   E    A    A     ++R+ E+  R 
Sbjct: 470 EAEEQARLAREAEEQARLAREAEEQARLAREAEEQARLARE--AEEQARLAREAEEQARL 527

Query: 273 FADEMSKLTILEKTREQKTI 292
             +   +  +  +  EQ  +
Sbjct: 528 AREAEEQARLAREAEEQARL 547


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.311    0.138    0.377 

Lambda     K      H
   0.267   0.0425    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,368,430,754
Number of Sequences: 14124377
Number of extensions: 341952151
Number of successful extensions: 1547579
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 28396
Number of HSP's successfully gapped in prelim test: 45537
Number of HSP's that attempted gapping in prelim test: 1392014
Number of HSP's gapped (non-prelim): 162259
length of query: 440
length of database: 4,842,793,630
effective HSP length: 142
effective length of query: 298
effective length of database: 2,837,132,096
effective search space: 845465364608
effective search space used: 845465364608
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 83 (36.5 bits)